##maf version=1 scoring=blastz
a score=0.000000
s hg38.chrUn_KI270755v1                                          0 20 +     36723 T-T-A----AACG----GTTGTT-TC-AC-T-G------------C
s Acinonyx_jubatus.LLWD01001279.1                           808507 11 +   1699592 ---------aatg----gttgtt-t---------------------
i Acinonyx_jubatus.LLWD01001279.1                        N 0 I 5
s Acomys_cahirinus.AcoCah_scaffold_21377                     17584 22 +     63021 g-tta----agtg----tctgtt-tt-tt-ggg------------g
i Acomys_cahirinus.AcoCah_scaffold_21377                 N 0 I 44
s Allactaga_bullata.AllBul_scaffold_20030                     9987 20 -     61208 g-t-a----acta----gttgtt-tg-gc-a-g------------g
i Allactaga_bullata.AllBul_scaffold_20030                N 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43310 20 +     53615 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Allenopithecus_nigroviridis.k141_3755588               N 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39127 18 +     44087 ----a----aacc----gttgtt-tc-ac-t-g------------c
i Allochrocebus_lhoesti.k141_441277                      N 0 C 0
s Alouatta_belzebul.k141_1011583                             68046 20 -     84148 t-t-a----aata----gttgct-tc-ac-c-g------------a
i Alouatta_belzebul.k141_1011583                         N 0 C 0
s Alouatta_caraya.k141_1109140                               40269 20 -     78289 t-t-a----aata----gttgct-tc-ac-c-g------------a
i Alouatta_caraya.k141_1109140                           N 0 C 0
s Alouatta_discolor.k141_2561099                             39717 20 +     55831 t-t-a----aata----gttgct-tc-ac-c-a------------a
i Alouatta_discolor.k141_2561099                         N 0 C 0
s Alouatta_juara.k141_1687208                                38158 20 -     64179 t-c-a----aata----gttgct-tc-ac-c-g------------a
i Alouatta_juara.k141_1687208                            N 0 C 0
s Alouatta_macconnelli.k141_361275                           19801 20 -     24835 t-c-a----aata----gttgct-tc-ac-c-g------------a
i Alouatta_macconnelli.k141_361275                       N 0 C 0
s Alouatta_nigerrima.k141_376068                             36784 20 +     45454 t-c-a----aata----gttgct-tc-ac-c-g------------a
i Alouatta_nigerrima.k141_376068                         N 0 C 0
s Alouatta_palliata.k141_638677                              42483 20 +     70886 t-t-a----aata----gttgct-tc-ac-c-g------------a
i Alouatta_palliata.k141_638677                          N 0 C 0
s Alouatta_puruensis.k141_251022                              4610 20 +     30854 t-t-a----aata----gttgct-tc-ac-c-a------------a
i Alouatta_puruensis.k141_251022                         N 0 C 0
s Alouatta_seniculus.k141_928287                             28749 20 +     42133 t-c-a----aata----gttgct-tc-ac-c-g------------a
i Alouatta_seniculus.k141_928287                         N 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583216 20 +   2318259 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Ammotragus_lervia.NIVO01071767.1                       N 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      171963 20 -    412891 t-t-a----aatg----gttgtt-gc-cc-t-g------------g
i Anoura_caudifer.AnoCau_scaffold_1412                   N 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48299 20 -     68529 t-t-a----aatg----gttgtt-tc-cc-t-g------------g
i Antilocapra_americana.AntAmePen_scaffold_21030         N 0 C 0
s Aotus_azarae.k141_118258                                   46558 20 -     65372 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Aotus_azarae.k141_118258                               N 0 C 0
s Aotus_griseimembra.k141_982342                             40306 20 +     43593 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Aotus_griseimembra.k141_982342                         N 0 C 0
s Aotus_nancymaae.KZ198451.1                                668316 20 +   5030052 T-T-A----AACA----GTTGTT-TC-AC-T-G------------A
i Aotus_nancymaae.KZ198451.1                             N 0 C 0
s Aotus_trivirgatus.k141_192090                              19960 20 -     23494 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Aotus_trivirgatus.k141_192090                          N 0 C 0
s Aotus_vociferans.k141_944972                                5094 20 +      8415 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Aotus_vociferans.k141_944972                           N 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5523 19 -     32367 t-t-a----aatg----gttggt--t-gt-t-g------------g
i Aplodontia_rufa.AprRuf_scaffold_46868                  N 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270546 20 +  21539123 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Ateles_geoffroyi_b.tarseq_1536                            N 0 C 0
s Ateles_belzebuth.k141_1572163                               6717 20 +     48076 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Ateles_belzebuth.k141_1572163                          N 0 C 0
s Ateles_chamek.k141_615173                                   1852 20 -     28759 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Ateles_chamek.k141_615173                              N 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29403 20 +     44353 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Ateles_geoffroyi_a.k141_1283730                          N 0 C 0
s Ateles_marginatus.k141_970259                              44778 20 -     71267 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Ateles_marginatus.k141_970259                          N 0 C 0
s Ateles_paniscus.k141_866194                                18834 20 -     33135 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Ateles_paniscus.k141_866194                            N 0 C 0
s Avahi_laniger.k141_2756659                                  1966 24 +     11645 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Avahi_laniger.k141_2756659                             N 0 C 0
s Avahi_peyrierasi.k141_1823318                               1968 24 -     19611 t-c-a----aataaatggttgtt-tc-ac-t-g------------g
i Avahi_peyrierasi.k141_1823318                          N 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955049 20 -  23207421 t-t-a----aatg----gttgtt-tc-ac-t-g------------a
i Balaenoptera_acutorostrata.KI537508.1                  N 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2257 20 -      4711 t-t-a----aatg----gttgtt-tc-ac-t-g------------a
i Balaenoptera_bonaerensis.DF507193.1                    N 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84203 20 +    124022 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Beatragus_hunteri.BeaHun_scaffold_7278                 N 0 C 0
s Bison_bison.KN261452.1                                     19732 20 +    288883 t-t-a----agtg----gttgtt-tc-ac-t-g------------g
i Bison_bison.KN261452.1                                 N 0 C 0
s Bos_indicus.CM003047.1                                  20354119 20 +  48749331 t-t-a----agtg----gttgtt-tc-ac-t-g------------g
i Bos_indicus.CM003047.1                                 N 0 C 0
s Bos_mutus.JH880303.1                                      752691 20 +   1948126 t-t-a----agtg----gttgtt-tc-ac-t-g------------g
i Bos_mutus.JH880303.1                                   N 0 C 0
s Bos_taurus.CM000203.6                                   27542826 20 -  45695690 t-t-a----agtg----gttgtt-tc-ac-t-g------------g
i Bos_taurus.CM000203.6                                  N 0 C 0
s Bubalus_bubalis.KI419123.1                               1527846 20 -   4408762 t-t-a----agtg----gttgtt-tc-ac-c-g------------g
i Bubalus_bubalis.KI419123.1                             N 0 C 0
s Cacajao_ayresi.k141_96119                                   3737 20 +     28062 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Cacajao_ayresi.k141_96119                              N 0 C 0
s Cacajao_calvus.k141_89051                                  39032 20 -     91139 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Cacajao_calvus.k141_89051                              N 0 C 0
s Cacajao_hosomi.k141_81245                                  16557 20 +     95584 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Cacajao_hosomi.k141_81245                              N 0 C 0
s Cacajao_melanocephalus.k141_619699                         16470 20 +    119600 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Cacajao_melanocephalus.k141_619699                     N 0 C 0
s Callimico_goeldii.k141_1609886                              5672 20 -     13885 t-t-a----aaca----gttgtt-tc-cc-t-g------------a
i Callimico_goeldii.k141_1609886                         N 0 C 0
s Callithrix_geoffroyi.k119_473390                           14357 20 +     17162 t-t-a----aaca----gttgtt-tc-cc-t-g------------a
i Callithrix_geoffroyi.k119_473390                       N 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449313 20 + 189096842 T-T-A----AACA----GTTGTT-TC-CC-T-G------------A
i Callithrix_jacchus.pat_scaffold_3                      N 0 C 0
s Callithrix_kuhlii.k119_404482                              15606 20 -     18408 t-t-a----aaca----gttgtt-tc-cc-t-g------------a
i Callithrix_kuhlii.k119_404482                          N 0 C 0
s Camelus_bactrianus.KN276810.1                            7629042 20 +  17673402 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Camelus_bactrianus.KN276810.1                          N 0 C 0
s Camelus_dromedarius.KN272107.1                           4663328 20 +   7040546 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Camelus_dromedarius.KN272107.1                         N 0 C 0
s Camelus_ferus.KB017975.1                                 1206988 20 +   1652518 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Camelus_ferus.KB017975.1                               N 0 C 0
s Capra_aegagrus.CM003241.1                               27406923 20 -  46296322 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Capra_aegagrus.CM003241.1                              N 0 C 0
s Capra_hircus.CM004588.1                                 26589196 20 +  44709034 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Capra_hircus.CM004588.1                                N 0 C 0
s Carlito_syrichta.NW_007259797.1                           265091 20 +    496798 T-T-A----AATT----ATTGTT-TT-GC-T-G------------G
i Carlito_syrichta.NW_007259797.1                        N 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    17928 20 -     39886 c-t-a----aatg----gttgtt-tc-ac-t-g------------a
i Castor_canadensis.CasCan_scaffold_39952                N 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     74744 20 -    217609 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Catagonus_wagneri.CatWag_scaffold_2839                 N 0 C 0
s Cebuella_niveiventris.k141_748279                            947 19 -      1068 t-t-a----aaca----g-tgtt-tc-cc-t-g------------a
i Cebuella_niveiventris.k141_748279                      N 0 C 0
s Cebuella_pygmaea.k141_145798                               38778 19 +     53515 t-t-a----aaca----g-tgtt-tc-cc-t-g------------a
i Cebuella_pygmaea.k141_145798                           N 0 C 0
s Cebus_albifrons.Contig27                                  367005 20 -  26074798 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Cebus_albifrons.Contig27                               N 0 C 0
s Cebus_olivaceus.k141_1404781                                3894 20 -     34880 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Cebus_olivaceus.k141_1404781                           N 0 C 0
s Cebus_unicolor.k141_1654760                                62989 20 -     89041 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Cebus_unicolor.k141_1654760                            N 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13373 20 -     50533 t-t-a----aatt----attgtt-tt-gc-t-g------------g
i Cephalopachus_bancanus.k141_1275952                    N 0 C 0
s Ceratotherium_simum.JH767749.1                          15487676 20 -  27778364 t-c-a----catg----gttgtt-tc-ac-t-g------------g
i Ceratotherium_simum.JH767749.1                         N 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14509 20 +     27315 t-c-a----catg----gttgtt-tc-ac-t-g------------g
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      N 0 C 0
s Cercocebus_atys.KQ010504.1                                136470 20 -   4669795 T-T-A----AACC----ATTGTT-TC-AC-T-G------------G
i Cercocebus_atys.KQ010504.1                             N 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40211 20 +     47900 t-t-a----aacc----attgtt-tc-ac-t-g------------g
i Cercocebus_chrysogaster.k141_1522556                   N 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40043 20 -     44860 t-t-a----aacc----attgtt-tc-ac-t-g------------g
i Cercocebus_lunulatus.k141_2779015                      N 0 C 0
s Cercocebus_torquatus.k141_2159127                          40025 20 -    148725 t-t-a----aacc----attgtt-tc-ac-t-g------------g
i Cercocebus_torquatus.k141_2159127                      N 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23011 20 -     40656 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Cercopithecus_ascanius.k141_3120866                    N 0 C 0
s Cercopithecus_cephus.k141_4183004                           3019 20 +     20796 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Cercopithecus_cephus.k141_4183004                      N 0 C 0
s Cercopithecus_diana.k141_132293                             7274 20 -     17524 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Cercopithecus_diana.k141_132293                        N 0 C 0
s Cercopithecus_hamlyni.k141_566925                          22966 20 -     34525 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Cercopithecus_hamlyni.k141_566925                      N 0 C 0
s Cercopithecus_lowei.k141_2101310                            7686 20 -     25376 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Cercopithecus_lowei.k141_2101310                       N 0 C 0
s Cercopithecus_albogularis.ctg5                                  360163 20 -  39242232 t-t-a----aacc----gttgtt-tc-ac-t-g------------t
i Cercopithecus_albogularis.ctg5                               N 0 C 0
s Cercopithecus_mona.ctg39                                  265992 20 +  21565898 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Cercopithecus_mona.ctg39                               N 0 C 0
s Cercopithecus_neglectus.k141_858615                        27437 20 -     45857 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Cercopithecus_neglectus.k141_858615                    N 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23228 20 -     32606 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Cercopithecus_nictitans.k141_2995370                   N 0 C 0
s Cercopithecus_petaurista.k141_1716667                      26877 20 +     27662 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Cercopithecus_petaurista.k141_1716667                  N 0 C 0
s Cercopithecus_pogonias.k141_6079                           20927 20 +     70610 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Cercopithecus_pogonias.k141_6079                       N 0 C 0
s Cercopithecus_roloway.k141_3012935                         17792 20 +     36323 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Cercopithecus_roloway.k141_3012935                     N 0 C 0
s Cheirogaleus_major.k141_666340                             26388 24 -     33796 t-t-a----aataaatggctgtt-tc-ac-t-g------------g
i Cheirogaleus_major.k141_666340                         N 0 C 0
s Cheirogaleus_medius.k141_759766                              582 24 -     15404 t-t-a----aataaatggctgtt-tc-ac-t-g------------g
i Cheirogaleus_medius.k141_759766                        N 0 C 0
s Cheracebus_lucifer.k141_2312002                             4835 20 -     32913 t-t-a----aaca----gttgtt-tc-ac-t-g------------g
i Cheracebus_lucifer.k141_2312002                        N 0 C 0
s Cheracebus_lugens.k141_1179667                             15248 20 -     40346 t-t-a----aaca----gttgtt-tc-ac-t-g------------g
i Cheracebus_lugens.k141_1179667                         N 0 C 0
s Cheracebus_regulus.k141_471822                             15512 20 +    216457 t-t-a----aaca----gttgtt-tc-ac-t-g------------g
i Cheracebus_regulus.k141_471822                         N 0 C 0
s Cheracebus_torquatus.k141_890198                           15290 20 +     39636 t-t-a----aaca----gttgtt-tc-ac-t-g------------g
i Cheracebus_torquatus.k141_890198                       N 0 C 0
s Chiropotes_albinasus.k141_2737257                          16343 20 -     17061 t-t-a----aaca----gttgtt-tc-ct-t-g------------a
i Chiropotes_albinasus.k141_2737257                      N 0 C 0
s Chiropotes_israelita.k141_313004                           38377 20 -    112038 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Chiropotes_israelita.k141_313004                       N 0 C 0
s Chiropotes_sagulatus.k141_1113111                           3949 20 +     34062 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Chiropotes_sagulatus.k141_1113111                      N 0 C 0
s Chlorocebus_aethiops.ctg25                                338688 22 +  18827391 ----agttaaacc----gttgtt-tc-ac-t-g------------t
i Chlorocebus_aethiops.ctg25                             N 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5292 22 -     44032 ----agttaaacc----gttgtt-tc-ac-t-g------------t
i Chlorocebus_pygerythrus.k141_3063162                   N 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300014 22 - 135778131 ----AGTTAAACC----GTTGTT-TC-AC-T-G------------T
i Chlorocebus_sabaeus.CM001947.1                         N 0 C 0
s Colobus_angolensis.KN981557.1                             404547 20 -   2368649 T-T-A----AACC----GTTGTT-TC-AC-T-G------------C
i Colobus_angolensis.KN981557.1                          N 0 C 0
s Colobus_guereza.LG01                                      373737 20 - 200372422 T-T-A----AACC----GTTGTT-TC-AC-T-G------------C
i Colobus_guereza.LG01                                   N 0 C 0
s Colobus_polykomos.k141_1559707                              4431 20 -      6605 T-T-A----AACC----GTTGTT-TC-AC-T-G------------C
i Colobus_polykomos.k141_1559707                         N 0 C 0
s Condylura_cristata.JH655891.1                           35802631 20 +  53390261 c-t-a----aatt----gttgtt-tc-aa-g-g------------g
i Condylura_cristata.JH655891.1                          N 0 I 17
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8197 20 +     10921 t-t-c----aata----gttgtt-tc-at-t-t------------g
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     N 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 38223 21 -     83289 G-T-A----AGTG----GTTGTT-TC-CCAG-G------------G
i Cricetomys_gambianus.CriGam_scaffold_14425             N 0 I 42
s Cricetulus_griseus.LT883664.1                          213112169 20 - 224834208 G-T-A----AGTG----GCTATT-TC-AT-G-G------------G
i Cricetulus_griseus.LT883664.1                          N 0 I 44
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45168 11 -     47254 ---------aatg----gttgtt-t---------------------
i Cryptoprocta_ferox.CryFer_flattened_line_24933         N 0 I 5
s Ctenodactylus_gundi.CteGun_scaffold_65                    640158 21 -   1526836 t-t-a----aatg----gttgtt-tc-ac-g-gg-----------a
i Ctenodactylus_gundi.CteGun_scaffold_65                 N 0 C 0
s Daubentonia_madagascariensis.ctg71                        288405 24 +  12879189 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Daubentonia_madagascariensis.ctg71                     N 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623382 20 -  35494412 t-t-a----aatg----gttgtt-tt-gc-t-g------------a
i Delphinapterus_leucas.KZ290073.1                       N 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660101 20 -   1390856 t-c-a----aatg----gttgtt-tc-ac-t-g------------g
i Dicerorhinus_sumatrensis.PEKH010002091.1               N 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                  134497 20 -    198055 t-c-a----aatg----gttgtt-tc-ac-t-g------------g
i Diceros_bicornis.DicBicMic_scaffold_5955               N 0 C 0
s Eidolon_helvum.AWHC01266696.1                               1587  5 +     19438 t-t-c----aa-----------------------------------
i Eidolon_helvum.AWHC01266696.1                          N 0 I 3
s Elaphurus_davidianus.JRFZ01104969.1                       237589 20 -    607251 t-t-a----aatg----gctgtt-tc-ac-t-g------------g
i Elaphurus_davidianus.JRFZ01104969.1                    N 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          26044 20 +    110024 g-t-a----agtg----gttatt-tc-at-g-g------------g
i Ellobius_lutescens.LOEQ01008920.1                      N 0 I 44
s Ellobius_talpinus.LOJH01026522.1                            7962 20 +     18970 g-t-a----agtg----gttatt-tc-AT-G-A------------G
i Ellobius_talpinus.LOJH01026522.1                       N 0 I 44
s Eptesicus_fuscus.JH977646.1                             12572633 20 +  14770903 t-g-a----agtg----gttgtt-cc-ac-t-g------------g
i Eptesicus_fuscus.JH977646.1                            N 0 C 0
s Equus_asinus.JREZ01000139.1                              3037133 20 -   4378816 t-t-a----aatg----tttgtt-tc-ac-t-g------------g
i Equus_asinus.JREZ01000139.1                            N 0 C 0
s Equus_caballus.CM000403.2                               21371064 20 +  39960074 t-t-a----aatg----tttgtt-tc-ac-t-g------------g
i Equus_caballus.CM000403.2                              N 0 C 0
s Equus_przewalskii.KK951119.1                              407850 20 -    498745 t-t-a----aatg----tttgtt-tc-ac-t-g------------g
i Equus_przewalskii.KK951119.1                           N 0 C 0
s Erythrocebus_patas.Contig38                               258249 18 +  21539334 ----a----aacc----gttgtt-tc-ac-t-g------------c
i Erythrocebus_patas.Contig38                            N 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           62936 14 -    133382 ------------g----gttgtt-tc-ac-t-g------------a
i Eschrichtius_robustus.EscRob_flattened_line_8968       N 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3144 20 +      7672 t-t-a----aatg----gttgtt-tc-ac-t-g------------a
i Eubalaena_japonica.EubJap_flattened_line_118172        N 0 C 0
s Eulemur_albifrons.k141_51491                               11366 24 -     24895 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Eulemur_albifrons.k141_51491                           N 0 C 0
s Eulemur_collaris.k141_601111                               39078 24 -     70999 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Eulemur_collaris.k141_601111                           N 0 C 0
s Eulemur_coronatus.k141_384460                              83038 24 +    112731 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Eulemur_coronatus.k141_384460                          N 0 C 0
s Eulemur_flavifrons.k141_433119                             39610 24 +     68309 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Eulemur_flavifrons.k141_433119                         N 0 C 0
s Eulemur_fulvus.k141_636316                                 49935 24 -     65740 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Eulemur_fulvus.k141_636316                             N 0 C 0
s Eulemur_macaco.k141_1562045                                20565 24 -     75513 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Eulemur_macaco.k141_1562045                            N 0 C 0
s Eulemur_mongoz.k141_232305                                 44758 24 -     97555 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Eulemur_mongoz.k141_232305                             N 0 C 0
s Eulemur_rubriventer.k141_1423786                            1485 24 +     30972 t-t-a----aataaacggttgtt-tc-ac-t-g------------g
i Eulemur_rubriventer.k141_1423786                       N 0 C 0
s Eulemur_rufus.k141_514691                                  39208 24 -     52037 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Eulemur_rufus.k141_514691                              N 0 C 0
s Eulemur_sanfordi.k141_1122526                              55609 24 -    111500 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Eulemur_sanfordi.k141_1122526                          N 0 C 0
s Felis_catus.CM001381.2                                 186242160 11 - 206538554 ---------aatg----gttgtt-t---------------------
i Felis_catus.CM001381.2                                 N 0 I 5
s Felis_catus_fca126.CM031415.1                          185111936 11 - 205367284 ---------aatg----gttgtt-t---------------------
i Felis_catus_fca126.CM031415.1                          N 0 I 5
s Felis_nigripes.FelNig_flattened_line_31944                 23308 11 -     30238 ---------aatg----gttgtt-t---------------------
i Felis_nigripes.FelNig_flattened_line_31944             N 0 I 5
s Galeopterus_variegatus.GalVar_scaffold_74466               14129 20 +     18121 t-t-a----agtg----gttgct-tc-ac-t-g------------g
i Galeopterus_variegatus.GalVar_scaffold_74466           N 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89266 20 -     95226 t-t-a----aatg----gttgtt-cc-at-t-g------------g
i Giraffa_tippelskirchi.LVKQ01S015573.1                  N 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31148 20 -     36801 t-t-a----aatg----gtggtt-tc-at-g-g------------g
i Glis_glis.GliGli_scaffold_33859                        N 0 C 0
s Gorilla_beringei.k141_3358147                                358 20 -      8343 t-t-a----aacg----gttgtt-tc-ac-t-g------------t
i Gorilla_beringei.k141_3358147                          N 0 I 42
s Gorilla_gorilla.LT578341.1                                249852 20 - 186649187 t-t-a----aacg----gttgtt-tc-ac-t-g------------t
i Gorilla_gorilla.LT578341.1                             N 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   10756 20 +     11903 t-t-t----aatg----gtggtt-tc-at-g-g------------g
i Graphiurus_murinus.GraMur_scaffold_90206               N 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11299 24 -     40692 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Hapalemur_alaotrensis.k141_330369                      N 0 C 0
s Hapalemur_gilberti.k141_646465                             32701 24 +     49394 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Hapalemur_gilberti.k141_646465                         N 0 C 0
s Hapalemur_griseus.k141_763500                              57569 24 -     66874 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Hapalemur_griseus.k141_763500                          N 0 C 0
s Hapalemur_meridionalis.k141_258450                          6446 24 -     42923 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Hapalemur_meridionalis.k141_258450                     N 0 C 0
s Hapalemur_occidentalis.k141_578367                         13442 24 -     53142 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Hapalemur_occidentalis.k141_578367                     N 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26110 11 -    327341 ---------aatg----gttgtt-t---------------------
i Helogale_parvula.HelPar_flattened_line_2585            N 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7029 20 +     48891 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Hemitragus_hylocrius.HemHyl_scaffold_35685             N 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10577 20 +     12639 g-t-g----cgtg----attatt-tc-ag-t-g------------g
i Heterohyrax_brucei.HetBruBak_scaffold_99956            N 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5628 20 -     36432 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Hippopotamus_amphibius.HipAmp_scaffold_38803           N 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545444 20 -   1711038 t-a-a----aaga----gttgtt-tc-ac-t-g------------g
i Hipposideros_armiger.JXIK01000431.1                    N 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               44735 20 +     49977 a-a-a----aata----gttgtt-tc-ac-t-g------------g
i Hipposideros_galeritus.HipGal_scaffold_23202           N 0 C 0
s Hoolock_leuconedys.ctg274                                    137752 20 -    630532 t-t-a----aaca----gttgtt-tc-ac-t-g------------c
i Hoolock_leuconedys.ctg274                                 N 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  64533  9 +     83186 ---------AATG----TTTAT------------------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              N 0 C 0
s Hylobates_agilis.k141_1155965                                780 20 +     12352 t-t-a----aaca----gttgtt-tc-ac-t-g------------c
i Hylobates_agilis.k141_1155965                          N 0 C 0
s Hylobates_klossii.k141_738755                               7963 20 +     55766 t-t-a----aaca----gttgtt-tc-ac-t-g------------c
i Hylobates_klossii.k141_738755                          N 0 C 0
s Hylobates_pileatus_b.LG02                                       2047307 20 + 191637585 t-t-a----aaca----gttgtt-tc-ac-t-g------------c
i Hylobates_pileatus_b.LG02                                     N 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796639 20 +  11177569 t-t-a----aaca----gttgtt-tc-ac-t-g------------c
i Hylobates_pileatus_a.tarseq_633                          N 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2478 20 -    135385 t-g-a----aatg----tttctt-tc-ac-c-g------------a
i Hystrix_cristata.HysCri_scaffold_5660                  N 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374572 20 +   7955117 t-t-a----aatg----attgtt-ct-ga-t-a------------a
i Ictidomys_tridecemlineatus.JH393364.1                  N 0 C 0
s Indri_indri.k141_2435083                                     657 13 +      1070 -----------------gctatt-tc-ac-t-g------------g
i Indri_indri.k141_2435083                               N 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1164 20 -     16823 t-t-a----aatg----gttgtt-tc-ac-t-g------------a
i Inia_geoffrensis.IniGeo_flattened_line_69447           N 0 C 0
s Jaculus_jaculus.JH725527.1                               1232412 20 +   9596543 g-t-a----acta----gttgtt-tg-gc-A-T------------G
i Jaculus_jaculus.JH725527.1                             N 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 63669 20 -     97402 t-t-a----agtg----gttgtt-tc-gc-t-g------------a
i Kogia_breviceps.KogBre_flattened_line_3970             N 0 C 0
s Lagothrix_lagothricha.k141_246028                          39098 20 +    110728 t-t-a----aaca----gttgtt-tc-ac-t-g------------a
i Lagothrix_lagothricha.k141_246028                      N 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58194 20 -     65777 t-t-a----agtg----gttgtt-cc-ag-t-g------------g
i Lasiurus_borealis.LasBor_scaffold_16567                N 0 I 68
s Lemur_catta.scaffold_24                                 14756091 24 +  30322482 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Lemur_catta.scaffold_24                                N 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        4754 20 -      5330 t-t-a----aaca----gttgtt-tc-cc-t-g------------a
i Leontocebus_fuscicollis.k141_3469711                   N 0 C 0
s Leontocebus_illigeri.k141_2813249                          16191 20 -     16762 t-t-a----aaca----gttgtt-tc-cc-t-g------------a
i Leontocebus_illigeri.k141_2813249                      N 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16490 20 -     17065 t-t-a----aaca----gttgtt-tc-cc-t-g------------a
i Leontocebus_nigricollis.k141_5626589                   N 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6015 20 -     11567 t-t-a----aaca----gttgtt-tc-cc-t-g------------a
i Leontopithecus_chrysomelas.k141_1327670                N 0 C 0
s Leontopithecus_rosalia.k141_349454                          7396 20 -     12945 t-t-a----aaca----gttgtt-tc-cc-t-g------------a
i Leontopithecus_rosalia.k141_349454                     N 0 C 0
s Lepilemur_ankaranensis.k141_567626                          4745 24 +     29618 t-t-g----aataaatggctatt-tc-ac-t-g------------g
i Lepilemur_ankaranensis.k141_567626                     N 0 C 0
s Lepilemur_dorsalis.k141_387009                              4744 24 +     31569 t-t-g----aataaatggctatt-tc-ac-t-g------------g
i Lepilemur_dorsalis.k141_387009                         N 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          4752 24 +     24756 t-t-g----aataaatggctatt-tc-ac-t-g------------g
i Lepilemur_ruficaudatus.k141_330196                     N 0 C 0
s Lepilemur_septentrionalis.k141_360456                       4749 24 +     16388 t-t-g----aataaatggctatt-tc-ac-t-g------------g
i Lepilemur_septentrionalis.k141_360456                  N 0 C 0
s Lipotes_vexillifer.KE559953.1                             332687 20 +    662738 t-t-a----aatg----gttgtt-tc-gc-t-g------------a
i Lipotes_vexillifer.KE559953.1                          N 0 C 0
s Lophocebus_aterrimus.ctg367                               328426 20 -   1826925 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Lophocebus_aterrimus.ctg367                            N 0 C 0
s Loxodonta_africana.GL010049.1                           39075760 19 +  43346337 --a-a----aatg----attatt-tc-AA-T-G------------G
i Loxodonta_africana.GL010049.1                          N 0 C 0
s Macaca_arctoides.k141_1757516                              40707 20 -     61512 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Macaca_arctoides.k141_1757516                          N 0 C 0
s Macaca_assamensis.Contig5                                 368335 20 -  60120075 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Macaca_assamensis.Contig5                              N 0 C 0
s Macaca_cyclopis.k119_263443                                20654 20 +     30207 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Macaca_cyclopis.k119_263443                            N 0 C 0
s Macaca_fascicularis.k141_1397292                           17757 20 -     24934 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Macaca_fascicularis.k141_1397292                       N 0 C 0
s Macaca_fuscata.k119_546792                                 20541 20 +     30527 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Macaca_fuscata.k119_546792                             N 0 C 0
s Macaca_leonina.k141_321385                                 31730 20 -     50087 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Macaca_leonina.k141_321385                             N 0 C 0
s Macaca_maura.k141_1103459                                  41468 20 +     51645 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Macaca_maura.k141_1103459                              N 0 C 0
s Macaca_mulatta.NC_041758.1                                410042 20 - 187317192 T-T-A----AACC----ATTGTT-TC-AC-T-G------------C
i Macaca_mulatta.NC_041758.1                             N 0 C 0
s Macaca_nemestrina.KQ007038.1                              394925 20 +  25927173 T-T-A----AACC----ATTGTT-TC-AC-T-G------------C
i Macaca_nemestrina.KQ007038.1                           N 0 C 0
s Macaca_nigra.k141_2818840                                  44057 20 -     62418 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Macaca_nigra.k141_2818840                              N 0 C 0
s Macaca_radiata.k141_3557992                                20744 20 +     24253 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Macaca_radiata.k141_3557992                            N 0 C 0
s Macaca_siberu.k141_2185972                                 40501 20 +     59329 t-t-a----aacc----attgtt-tc-ac-t-g------------t
i Macaca_siberu.k141_2185972                             N 0 C 0
s Macaca_silenus.Contig273                                  266333 20 +    668171 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Macaca_silenus.Contig273                               N 0 C 0
s Macaca_thibetana.k99_41370                                 17679 20 +     21031 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Macaca_thibetana.k99_41370                             N 0 C 0
s Macaca_tonkeana.k141_1880923                               31411 20 +     33478 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Macaca_tonkeana.k141_1880923                           N 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218653 20 -    270270 t-t-c----aatg----gttgtt-tt-cc-t-g------------g
i Macroglossus_sobrinus.MacSob_scaffold_4024             N 0 C 0
s Mandrillus_leucophaeus.scaffold280                        317809 20 +  24302211 t-t-a----aacc----attgtt-tc-ac-t-g------------g
i Mandrillus_leucophaeus.scaffold280                     N 0 C 0
s Mandrillus_sphinx.Contig270                               352641 20 -    752769 t-t-a----aacc----attgtt-tc-ac-t-g------------g
i Mandrillus_sphinx.Contig270                            N 0 C 0
s Manis_javanica.JSZB01003497.1                             669402 17 -    737560 ---------aatg----gttgtt-tc-ac-t-a------------g
i Manis_javanica.JSZB01003497.1                          N 0 C 0
s Manis_pentadactyla.KN006162.1                             216698 17 +    317179 ---------aatg----gttgtt-tc-ag-t-a------------g
i Manis_pentadactyla.KN006162.1                          N 0 C 0
s Marmota_marmota.CZRN01000018.1                           7488672 20 +  40650429 t-t-a----aatg----attgtt-ct-ga-t-g------------a
i Marmota_marmota.CZRN01000018.1                         N 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       145710 20 +    207569 t-t-a----agta----gtggct-tc-ac-t-t------------g
i Megaderma_lyra.MegLyr_scaffold_4542                    N 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 44584 20 -    140813 g-t-a----agtg----gctatt-tc-tt-g-g------------g
i Meriones_unguiculatus.MerUng_scaffold_7390             N 0 I 44
s Mesocricetus_auratus.KB708134.1                         17426698  3 +  29670104 ------------------------------G-G------------G
i Mesocricetus_auratus.KB708134.1                        N 0 I 45
s Mesoplodon_bidens.MesBid_scaffold_6114                     79229 20 +     93471 t-t-a----aatg----gttgtt-tc-gc-t-g------------a
i Mesoplodon_bidens.MesBid_scaffold_6114                 N 0 C 0
s Mico_argentatus.k141_582562                                 5780 20 +     17804 t-t-a----aaca----gttgtt-tc-tc-t-g------------a
i Mico_argentatus.k141_582562                            N 0 C 0
s Mico_humeralifer.k141_1180625                               6552 20 -     12984 t-t-a----aaca----gttgtt-tc-tc-t-g------------a
i Mico_humeralifer.k141_1180625                          N 0 C 0
s Mico_schneideri.k141_1877700                                     14515 20 -     26561 t-t-a----aaca----gttgtt-tc-tc-t-g------------a
i Mico_schneideri.k141_1877700                                 N 0 C 0
s Microcebus_murinus.CM007674.1                           74980350 24 +  93316391 T-T-A----AATAAATGGCTGTT-TC-AC-T-G------------G
i Microcebus_murinus.CM007674.1                          N 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                179971 20 +    200668 t-t-a----actg----gttgtt-gc-ac-c-g------------g
i Micronycteris_hirsuta.MicHir_scaffold_2233             N 0 C 0
s Microtus_ochrogaster.CM001695.1                         15959460 20 +  27267610 g-t-a----agtg----gttatt-tc-at-g-g------------g
i Microtus_ochrogaster.CM001695.1                        N 0 I 44
s Miniopterus_natalensis.LDJU01000034.1                    6360350 13 -   8254450 t-t-a----aatg----gtcgtg-----------------------
i Miniopterus_natalensis.LDJU01000034.1                  N 0 I 16
s Miniopterus_schreibersii.MinSch_scaffold_23309             39244 13 -     48117 t-t-a----aatg----gtcgtg-----------------------
i Miniopterus_schreibersii.MinSch_scaffold_23309         N 0 I 16
s Miopithecus_ogouensis.k141_1534655                         17720 20 -     27822 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Miopithecus_ogouensis.k141_1534655                     N 0 C 0
s Mirza_zaza.k141_766280                                     48212 24 -     62432 t-t-a----aataaatggctgtt-tc-ac-t-g------------g
i Mirza_zaza.k141_766280                                 N 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351125 20 +    437263 t-t-a----aatg----gttgtt-tt-gc-t-g------------a
i Monodon_monoceros.MonMon_M_scaffold_103                N 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174158 21 +    366855 tct-a----aatg----gttgtt-gc-ct-t-g------------g
i Mormoops_blainvillei.MorMeg_scaffold_1417              N 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22182 20 -     82753 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Moschus_moschiferus.MosMos_scaffold_13123              N 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   13883 11 -     63510 ---------aatg----gttgtt-t---------------------
i Mungos_mungo.MunMun_flattened_line_18455               N 0 I 5
s Murina_feae.MurFea_scaffold_17764                          33069 20 +     47283 t-t-a----agtg----gtggtt-cc-ac-c-a------------g
i Murina_feae.MurFea_scaffold_17764                      N 0 C 0
s Mus_caroli.LT608237.1                                   35584694 20 + 120012414 g-t-a----gctg----gctatt-tc-at-g-g------------g
i Mus_caroli.LT608237.1                                  N 0 I 44
s Mus_musculus.chr8                                       41679085 20 + 129401213 g-t-a----gctg----gctatt-tc-at-g-g------------g
i Mus_musculus.chr8                                      N 0 I 44
s Mus_pahari.LT608297.1                                   58212709 20 +  89631738 g-t-a----actg----gctatt-tc-at-g-g------------g
i Mus_pahari.LT608297.1                                  N 0 I 44
s Mus_spretus.CM004101.1                                  39486194 20 + 130317789 g-t-a----gctg----gctatt-tc-at-g-g------------g
i Mus_spretus.CM004101.1                                 N 0 I 44
s Muscardinus_avellanarius.MusAve_scaffold_12866             79554 21 -     86153 t-t-a----aatg----gtggttttt-at-g-g------------a
i Muscardinus_avellanarius.MusAve_scaffold_12866         N 0 C 0
s Myotis_brandtii.KE162005.1                               9787518 20 +  10118263 t-t-a----agtg----gttgtt-cc-ac-c-g------------g
i Myotis_brandtii.KE162005.1                             N 0 C 0
s Myotis_davidii.KB100139.1                                4377904 20 +   6019432 t-t-a----agtg----gttgtt-cc-ac-t-g------------g
i Myotis_davidii.KB100139.1                              N 0 C 0
s Myotis_lucifugus.GL432175.1                                18148 20 -     39439 t-t-a----agtg----gttgtt-cc-ac-t-g------------g
i Myotis_lucifugus.GL432175.1                            N 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1462 20 +      3929 t-t-a----agtg----gttgtt-cc-ac-t-g------------g
i Myotis_myotis.MyoMyo_scaffold_185951                   N 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108588 20 +    130748 t-t-a----agtg----gttgtt-tc-ac-g-g------------g
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           N 0 I 21
s Nasalis_larvatus.k141_1350636                              24085 20 +     34575 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Nasalis_larvatus.k141_1350636                          N 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225298 20 -   7148211 t-t-a----aatg----gttgtt-tt-gc-t-g------------a
i Neophocaena_asiaeorientalis.KZ687982.1                 N 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   120102 20 -    149072 t-t-a----aatg----gttgtt-gc-cc-t-g------------g
i Noctilio_leporinus.NocLep_scaffold_7894                N 0 C 0
s Nomascus_annamensis.k141_1771965                           49037 20 -    132029 t-t-a----aaca----gttgtt-tc-ac-t-g------------c
i Nomascus_annamensis.k141_1771965                       N 0 C 0
s Nomascus_concolor.k141_735679                               5133 20 -     16345 t-t-a----aaca----gttgtt-tc-ac-t-g------------c
i Nomascus_concolor.k141_735679                          N 0 C 0
s Nomascus_gabriellae.k141_57920                             11016 20 +     22201 t-t-a----aaca----gttgtt-tc-ac-t-g------------c
i Nomascus_gabriellae.k141_57920                         N 0 C 0
s Nomascus_siki_b.tarseq_93                            8409353 20 -  22158432 t-t-a----aaca----gttgtt-tc-ac-t-g------------c
i Nomascus_siki_b.tarseq_93                          N 0 C 0
s Nomascus_siki_a.k141_941534                                  21416 20 -     54323 t-t-a----aaca----gttgtt-tc-ac-t-g------------c
i Nomascus_siki_a.k141_941534                              N 0 C 0
s Ochotona_princeps.JH802162.1                             2566451 21 -   3988456 t-t-g----aatg----attatt-ttttt-t-a------------g
i Ochotona_princeps.JH802162.1                           N 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434159 20 -    630418 t-t-a----aatg----gctgtt-tc-ac-t-g------------g
i Odocoileus_virginianus.KZ100018.1                      N 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12149 20 +    150152 t-t-a----aatg----gttgtt-tc-gt-t-g------------g
i Okapia_johnstoni.LVCL01S0005463.1                      N 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    85716 20 -    140218 g-t-a----aatg----gttatt-tc-at-g-g------------g
i Ondatra_zibethicus.OndZib_scaffold_7387                N 0 I 44
s Onychomys_torridus.OnyTor_scaffold_2487                   103045 20 +    107918 g-t-a----agtg----gtcatt-tc-ac-g-g------------g
i Onychomys_torridus.OnyTor_scaffold_2487                N 0 I 44
s Orcinus_orca.KB316932.1                                  8094563 20 +  10937097 t-t-a----aatg----gttgtt-tt-gc-t-g------------a
i Orcinus_orca.KB316932.1                                N 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107098761 20 - 174332312 t-t-g----aatg----attgtt-tc-cc-t-g------------g
i Oryctolagus_cuniculus.CM000791.1                       N 0 C 0
s Ovis_aries.CM001607.2                                   26402147 20 -  44047080 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Ovis_aries.CM001607.2                                  N 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       2666 20 +     17875 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Ovis_canadensis.OviCan_scaffold_67953                  N 0 C 0
s Pan_troglodytes.CM009242.2                               1467240 20 - 189151597 T-T-A----AATG----GTTGTT-TC-AC-T-G------------C
i Pan_troglodytes.CM009242.2                             N 0 I 42
s Panthera_onca.PanOnc_flattened_line_3271                   19884 11 -    230217 ---------aatg----gttgtt-t---------------------
i Panthera_onca.PanOnc_flattened_line_3271               N 0 I 5
s Panthera_pardus.KV860321.1                              18457206 11 -  18783137 ---------aatg----gttgtt-t---------------------
i Panthera_pardus.KV860321.1                             N 0 I 5
s Panthera_tigris.KE722367.1                               3967943 11 +   8748460 ---------aatg----gttgtt-t---------------------
i Panthera_tigris.KE722367.1                             N 0 I 5
s Pantholops_hodgsonii.KE114653.1                          1613595 20 +   2937107 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Pantholops_hodgsonii.KE114653.1                        N 0 C 0
s Papio_anubis.CM001495.2                                   238653 20 - 183742232 T-T-A----AACC----ATTGTT-TC-AC-T-G------------C
i Papio_anubis.CM001495.2                                N 0 C 0
s Papio_cynocephalus.k141_1507553                             5120 20 +     21308 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Papio_cynocephalus.k141_1507553                        N 0 C 0
s Papio_hamadryas.Contig39                                  286157 20 -  20919399 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Papio_hamadryas.Contig39                               N 0 C 0
s Papio_kindae.k141_2214839                                  17773 20 -     27687 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Papio_kindae.k141_2214839                              N 0 C 0
s Papio_papio.k141_799093                                    10909 20 +     16796 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Papio_papio.k141_799093                                N 0 C 0
s Papio_ursinus.k141_2278143                                 17719 20 -     23640 t-t-a----aacc----attgtt-tc-ac-t-g------------c
i Papio_ursinus.k141_2278143                             N 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10811 11 +     78924 ---------aatc----attatt-t---------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 N 0 I 1
s Peromyscus_maniculatus.KI615324.1                         242707 20 +  18517816 g-t-a----agcg----gttatt-tc-ac-g-g------------g
i Peromyscus_maniculatus.KI615324.1                      N 0 I 46
s Phocoena_phocoena.PhoPho_flattened_line_46867              10426 20 -     15039 t-t-a----aatg----gttgtt-tt-gc-t-g------------a
i Phocoena_phocoena.PhoPho_flattened_line_46867          N 0 C 0
s Piliocolobus_badius.k141_2495623                            4539 20 +      7560 t-t-a----aact----gttgtt-tc-ac-t-g------------c
i Piliocolobus_badius.k141_2495623                       N 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60246 20 -     63152 t-t-a----aact----gttgtt-tc-ac-t-g------------c
i Piliocolobus_gordonorum.k141_905727                    N 0 C 0
s Piliocolobus_kirkii.k141_579682                            42845 20 +     45295 t-t-a----aact----gttgtt-tc-ac-t-g------------c
i Piliocolobus_kirkii.k141_579682                        N 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     524 20 +      5735 T-T-A----AACT----GTTGTT-TC-AC-T-G------------C
i Piliocolobus_tephrosceles.PDMG02034973.1               N 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            44812 20 +     46691 t-t-a----agtg----attttt-cc-ac-t-g------------g
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        N 0 C 0
s Pithecia_albicans.k141_1239476                             60726 20 +    207309 t-g-a----aaca----gttgtt-tc-ac-t-g------------a
i Pithecia_albicans.k141_1239476                         N 0 C 0
s Pithecia_chrysocephala.k141_785207                          1846 20 -     25401 t-g-a----aaca----gttgtt-tc-ac-t-g------------a
i Pithecia_chrysocephala.k141_785207                     N 0 C 0
s Pithecia_hirsuta.k141_640380                               27561 20 +     58159 t-g-a----aaca----gttgtt-tc-ac-t-g------------a
i Pithecia_hirsuta.k141_640380                           N 0 C 0
s Pithecia_mittermeieri.k141_1280039                         27837 20 +     63561 t-g-a----aaca----gttgtt-tc-ac-t-g------------a
i Pithecia_mittermeieri.k141_1280039                     N 0 C 0
s Pithecia_pissinattii.k141_878371                           27600 20 +     51148 t-g-a----aaca----gttgtt-tc-ac-t-g------------a
i Pithecia_pissinattii.k141_878371                       N 0 C 0
s Pithecia_pithecia.tarseq_165                              552595 20 -   4542175 t-g-a----aaca----gttgtt-tc-ac-t-g------------a
i Pithecia_pithecia.tarseq_165                           N 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27584 20 +     51125 t-g-a----aaca----gttgtt-tc-ac-t-g------------a
i Pithecia_vanzolinii.k141_1369553                       N 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2509 20 -      8168 t-t-a----aatg----gttgtt-tc-ac-t-g------------a
i Platanista_gangetica.PlaMin_flattened_line_167872      N 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4019 20 +     39866 t-t-a----agca----gttgtt-tc-ac-t-g------------g
i Plecturocebus_bernhardi.k141_2549090                   N 0 C 0
s Plecturocebus_brunneus.k141_89578                           3803 20 -      4004 t-t-a----aaca----gttgtt-tc-ac-c-t------------g
i Plecturocebus_brunneus.k141_89578                      N 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38508 20 -     87950 t-t-a----agca----gttgtt-tc-ac-t-g------------g
i Plecturocebus_caligatus.k141_1382851                   N 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     38902 19 -     88961 t-t-a----a-ca----gttgtt-tc-ac-t-g------------g
i Plecturocebus_cinerascens.k141_1164729                 N 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3601 20 -     39403 t-t-a----agca----gttgtt-tc-ac-t-g------------g
i Plecturocebus_cupreus.k141_2351393                     N 0 C 0
s Plecturocebus_dubius.k141_1058799                          38554 20 +     87928 t-t-a----agca----gttgtt-tc-ac-t-g------------g
i Plecturocebus_dubius.k141_1058799                      N 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3597 20 -     60166 t-t-a----agca----gttgtt-tc-ac-t-g------------g
i Plecturocebus_grovesi.k141_2013005                     N 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10533 20 -     67232 t-t-a----agca----gttgtt-tc-ac-t-g------------g
i Plecturocebus_hoffmannsi.k141_3303950                  N 0 C 0
s Plecturocebus_miltoni.k141_349282                          38451 19 -     90634 t-t-a----a-ca----gttgtt-tc-ac-t-g------------g
i Plecturocebus_miltoni.k141_349282                      N 0 C 0
s Plecturocebus_moloch.k141_1031110                          39917 20 +     89403 t-t-a----agca----gttgtt-tc-ac-t-g------------g
i Plecturocebus_moloch.k141_1031110                      N 0 C 0
s Pongo_abelii.CM009266.2                                   172857 20 - 189387572 T-T-A----AACA----GTTGTT-TC-AC-T-G------------C
i Pongo_abelii.CM009266.2                                N 0 C 0
s Pongo_pygmaeus.ctg66                                      187855 20 -   9816681 t-t-a----aaca----gttgtt-tc-ac-t-g------------c
i Pongo_pygmaeus.ctg66                                   N 0 C 0
s Presbytis_comata.k141_1230337                              23025 20 +     69807 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Presbytis_comata.k141_1230337                          N 0 C 0
s Presbytis_mitrata.k141_584736                              40220 20 -     80239 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Presbytis_mitrata.k141_584736                          N 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7725 20 +     14086 g-t-g----cgtg----attatt-tc-ag-t-g------------g
i Procavia_capensis.ProCapCap_scaffold_121686            N 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979249 24 +   4620579 T-T-G----AATAAATGGTTGTT-TC-AC-T-G------------G
i Prolemur_simus.MPIZ01000396.1                          N 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1561831 24 -   2598838 T-T-A----AATAAATGGCTGTT-TC-AC-T-G------------G
i Propithecus_coquerelli.NW_012148875.1                  N 0 C 0
s Propithecus_coronatus.k141_149744                          78924 24 -     79582 t-t-a----aataaatggctgtt-tc-ac-t-g------------g
i Propithecus_coronatus.k141_149744                      N 0 C 0
s Propithecus_diadema.k141_153680                               69 24 -     11706 t-t-a----aataaatggctgtt-tc-ac-t-g------------g
i Propithecus_diadema.k141_153680                        N 0 C 0
s Propithecus_edwardsi.k141_635656                            3804 24 -     30655 t-t-a----aataaatggctgtt-tc-ac-t-g------------g
i Propithecus_edwardsi.k141_635656                       N 0 C 0
s Propithecus_perrieri.k141_1496898                          30133 24 +     46564 t-t-a----aataaatggctgtt-tc-ac-t-g------------g
i Propithecus_perrieri.k141_1496898                      N 0 C 0
s Propithecus_tattersalli.k141_1127767                       90424 24 -     98465 t-t-a----aataaatggctgtt-tc-ac-t-g------------g
i Propithecus_tattersalli.k141_1127767                   N 0 C 0
s Propithecus_verreauxi.k141_1047036                          4046 24 +     35169 t-t-a----aataaatggctgtt-tc-ac-t-g------------g
i Propithecus_verreauxi.k141_1047036                     N 0 C 0
s Psammomys_obesus.NESX01036366.1                            32078 20 +     52041 g-t-a----agtg----gctatt-tc-tt-g-g------------g
i Psammomys_obesus.NESX01036366.1                        N 0 I 44
s Pteronotus_parnellii.KE847780.1                            47219 20 -     66298 t-t-a----aatg----gttgtt-gc-cc-t-g------------g
i Pteronotus_parnellii.KE847780.1                        N 0 C 0
s Pteropus_alecto.KB030862.1                               5836123 15 -  28871421 ------------------------------t-ggttgttttactgg
i Pteropus_alecto.KB030862.1                             N 0 C 0
s Pteropus_vampyrus.KN525825.1                             3532699 15 -   4952924 ------------------------------t-ggttgttttactgg
i Pteropus_vampyrus.KN525825.1                           N 0 C 0
s Puma_concolor.QAVW01001104.1                            18094768 11 +  38429054 ---------aatg----gttgtt-t---------------------
i Puma_concolor.QAVW01001104.1                           N 0 I 5
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51116 20 +     55069 t-t-a----aatg----gctgtt-tc-ac-t-g------------g
i Rangifer_tarandus.RanTarSib_scaffold_29815             N 0 C 0
s Rattus_norvegicus.chr16                                 37011423 20 -  90668790 g-t-a----tgtg----gctatt-tc-AT-A-G------------G
i Rattus_norvegicus.chr16                                N 0 I 44
s Rhinolophus_sinicus.LVEH01000134.1                       2908215 20 +   3329780 t-t-a----aata----gttgtt-tc-ac-t-g------------g
i Rhinolophus_sinicus.LVEH01000134.1                     N 0 C 0
s Rhinopithecus_bieti.k119_221883                            24244 19 +     27361 t-t-a----aacc----g-tgtt-tc-ac-t-g------------c
i Rhinopithecus_bieti.k119_221883                        N 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117602 20 + 195417433 T-T-A----AACC----GTTGTT-TC-AC-T-G------------C
i Rhinopithecus_roxellana.NC_044550.1                    N 0 C 0
s Rhinopithecus_strykeri.ctg102                             231852 19 -   7961872 t-t-a----aacc----g-tgtt-tc-ac-t-g------------c
i Rhinopithecus_strykeri.ctg102                          N 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70182  5 -    116970 t-t-c----aa-----------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             N 0 I 3
s Saguinus_bicolor.k141_1125626                              16246 20 +     16959 t-t-a----aaca----gttgtt-tc-ct-t-g------------a
i Saguinus_bicolor.k141_1125626                          N 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38096 20 +     72255 t-t-a----aaca----gttgtt-tc-cc-t-g------------a
i Saguinus_geoffroyi.k141_2310874                        N 0 C 0
s Saguinus_imperator.k141_1164420                            10737 20 +     11432 t-t-a----aaca----gctgtt-tc-ct-t-g------------a
i Saguinus_imperator.k141_1164420                        N 0 C 0
s Saguinus_inustus.k141_2555509                              16112 20 -     16755 t-t-a----aaca----gttgtt-tc-ct-t-g------------a
i Saguinus_inustus.k141_2555509                          N 0 C 0
s Saguinus_labiatus.k141_3072636                             14682 20 -     15289 t-t-a----aaca----gttgtt-tc-ct-t-g------------a
i Saguinus_labiatus.k141_3072636                         N 0 C 0
s Saguinus_midas.LG03                                       386678 20 - 209938924 t-t-a----aaca----gttgtt-tc-ct-t-g------------a
i Saguinus_midas.LG03                                    N 0 C 0
s Saguinus_mystax.k141_2237965                                7543 20 +     22212 t-t-a----aaca----gttgtt-tc-ct-t-g------------a
i Saguinus_mystax.k141_2237965                           N 0 C 0
s Saguinus_oedipus.k141_1808308                              16040 20 +     39756 t-t-a----aaca----gttgtt-tc-cc-t-g------------a
i Saguinus_oedipus.k141_1808308                          N 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        5736 20 +     16473 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Saiga_tatarica.SaiTat_scaffold_39512                   N 0 C 0
s Sapajus_apella.ctg103                                     234229 20 +   5703754 t-t-a----aacg----gttgtt-tc-ac-t-g------------a
i Sapajus_apella.ctg103                                  N 0 C 0
s Sapajus_macrocephalus.k141_796559                           3819 20 +     21866 t-t-a----aacg----gttgtt-tc-ac-t-g------------a
i Sapajus_macrocephalus.k141_796559                      N 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111690 20 +    313613 t-t-a----aatt----gttgtt-tc-tc-t-g------------g
i Scalopus_aquaticus.ScaAqu_scaffold_662                 N 0 I 16
s Semnopithecus_entellus.k141_158471                         20733 20 +     27374 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Semnopithecus_entellus.k141_158471                     N 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24248 20 +     58920 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Semnopithecus_hypoleucos.k141_1910531                  N 0 C 0
s Semnopithecus_johnii.k141_843753                           10745 20 -     45317 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Semnopithecus_johnii.k141_843753                       N 0 C 0
s Semnopithecus_priam.k141_714795                            18402 20 -     42441 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Semnopithecus_priam.k141_714795                        N 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21084 20 -     29113 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Semnopithecus_schistaceus.k141_1432920                 N 0 C 0
s Semnopithecus_vetulus.k141_244474                          24156 20 -     48123 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Semnopithecus_vetulus.k141_244474                      N 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    43995 21 +     77746 g-tta----agtg----gttatt-tc-at-g-g------------g
i Sigmodon_hispidus.SigHis_scaffold_20193                N 0 I 44
s Solenodon_paradoxus.SolPar_flattened_line_126            1853877 20 -   1910179 t-t-c----agtg----gtagat-tc-ac-a-a------------g
i Solenodon_paradoxus.SolPar_flattened_line_126          N 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1854886 20 +   3870691 t-t-a----aatg----attgtt-ct-ga-t-a------------a
i Spermophilus_dauricus.KZ294078.1                       N 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120479 11 +    196729 ---------aatg----gttgtt-t---------------------
i Suricata_suricatta.SurSur_flattened_line_6629          N 0 I 5
s Sus_scrofa.CM000828.4                                    6639212 20 +  69701581 a-t-a----aatg----gctgtt-tc-ac-g-g------------g
i Sus_scrofa.CM000828.4                                  N 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386329 20 +   1523678 t-t-a----aaca----gttgtt-tc-ac-t-g------------c
i Symphalangus_syndactylus.tarseq_199                    N 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                10827 20 +     22964 t-t-g----aatg----actgtt-tc-ac-t-g------------g
i Tadarida_brasiliensis.TadBra_scaffold_54991            N 0 I 19
s Tamandua_tetradactyla.TamTet_scaffold_67439                23545 20 -     25844 t-t-a----agtg----gttgtt-tt-ac-t-g------------g
i Tamandua_tetradactyla.TamTet_scaffold_67439            N 0 I 21
s Tapirus_indicus.TapInd_scaffold_7432                      186925 20 +    199430 t-t-a----aatg----gttatt-tc-ac-t-g------------g
i Tapirus_indicus.TapInd_scaffold_7432                   N 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    100884 20 -    539355 t-t-a----aatg----gttatt-tc-ac-t-g------------g
i Tapirus_terrestris.TapTer_scaffold_755                 N 0 C 0
s Tarsius_lariang.k141_1780720                                2695 20 +      6850 t-t-a----aatt----attgtt-tt-gc-t-g------------g
i Tarsius_lariang.k141_1780720                           N 0 C 0
s Tarsius_wallacei.k141_226975                                2779 18 +     20590 ----a----aatt----attgtt-tt-gc-t-g------------g
i Tarsius_wallacei.k141_226975                           N 0 C 0
s Theropithecus_gelada.CM009954.1                           348638 20 - 186847797 T-T-A----AACC----ATTGTT-TC-AC-T-G------------T
i Theropithecus_gelada.CM009954.1                        N 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475008 20 -    610378 t-t-a----aatg----gttgtc-gc-cc-t-a------------g
i Tonatia_saurophila.TonSau_scaffold_294                 N 0 C 0
s Trachypithecus_auratus.k141_1189070                        16297 20 +     26378 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Trachypithecus_auratus.k141_1189070                    N 0 C 0
s Trachypithecus_crepusculus.k141_539312                     28978 20 -     78344 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Trachypithecus_crepusculus.k141_539312                 N 0 C 0
s Trachypithecus_cristatus.k141_180416                       15618 20 +     25722 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Trachypithecus_cristatus.k141_180416                   N 0 C 0
s Trachypithecus_francoisi.k141_1453105                      23841 20 -     62838 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Trachypithecus_francoisi.k141_1453105                  N 0 C 0
s Trachypithecus_geei.k141_1001272                           23960 20 +     46913 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Trachypithecus_geei.k141_1001272                       N 0 C 0
s Trachypithecus_germaini.k141_57262                          4768 20 -     28527 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Trachypithecus_germaini.k141_57262                     N 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      25780 20 -     64340 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Trachypithecus_hatinhensis.k141_31479                  N 0 C 0
s Trachypithecus_laotum.k141_928651                          23817 20 -     63452 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Trachypithecus_laotum.k141_928651                      N 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5259 20 +     22490 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Trachypithecus_leucocephalus.k141_96450                N 0 C 0
s Trachypithecus_melamera.k141_324021                         2879 20 +      4141 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Trachypithecus_melamera.k141_324021                    N 0 C 0
s Trachypithecus_obscurus.k141_848057                         5685 20 -     13050 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Trachypithecus_obscurus.k141_848057                    N 0 C 0
s Trachypithecus_phayrei.ctg124                             250922 20 -   6242583 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Trachypithecus_phayrei.ctg124                          N 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56654 20 +     59866 t-t-a----aacc----gttgtt-tc-ac-t-g------------c
i Trachypithecus_pileatus.k141_2862967                   N 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   171846 20 -    200418 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Tragulus_javanicus.TraJav_scaffold_3462                N 0 C 0
s Trichechus_manatus.JH594705.1                            6478384 20 -  10818551 t-g-a----aatg----attatt-tc-aa-t-g------------g
i Trichechus_manatus.JH594705.1                          N 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359315 20 -  33153633 t-t-a----aatg----gttgtt-tt-gc-t-g------------a
i Tursiops_truncatus.MRVK01000835.1                      N 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103113 20 -    105689 t-t-a----aatg----gttgtt-tc-ac-a-g------------g
i Uropsilus_gracilis.UroGra_scaffold_7153                N 0 I 16
s Varecia_rubra.k141_787544                                  20879 24 -     30710 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Varecia_rubra.k141_787544                              N 0 C 0
s Varecia_variegata.k141_289850                              19786 24 -    147434 t-t-a----aataaatggttgtt-tc-ac-t-g------------g
i Varecia_variegata.k141_289850                          N 0 C 0
s Vicugna_pacos.KN270157.1                                   74381 20 +   5488506 t-t-a----aatg----gttgtt-tc-ac-t-g------------g
i Vicugna_pacos.KN270157.1                               N 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        161857 20 -    224448 t-t-a----aata----attgtt-tt-gc-t-g------------a
i Xerus_inauris.XerIna_scaffold_2302                     N 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_95421                      12633 20 -     12806 g-t-a----aata----gttgtt-tg-ac-a-t------------g
i Zapus_hudsonius.ZapHud_scaffold_95421                  N 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2310576            189 20 -       394 t-t-c----aatg----gttgtt-tc-gc-t-g------------a
i Ziphius_cavirostris.ZipCav_flattened_line_2310576      N 0 C 0

a score=0.000000
s hg38.chrUn_KI270755v1                                         20 42 +     36723 GGGG-AA-A-AGAGTA-TCCC-A-AGCTCCT---------C----------T-----------CCTC----TG----GAAATCTGA
s Acinonyx_jubatus.LLWD01001279.1                           808523 47 +   1699592 g--g-ag-a-ggagta-tgcc-a-agttcctcatgta-g-c----------t-----------attc----tg----gaaggctga
i Acinonyx_jubatus.LLWD01001279.1                        I 5 I 6
s Acomys_cahirinus.AcoCah_scaffold_21377                     17650 42 +     63021 ACGG-AA-G-ACAACG-GGAC-A-AACTCTT---------T----------T-----------ATTT----TG----GAAGTCTGA
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 44 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410360 38 +  29979442 --------------tc-tGTC-A-AATTCCTCATACA-G-C----------T-----------ATTC----TG----AAAGTCTGA
i Ailuropoda_melanoleuca.LNAT01000098.1                  N 0 I 6
s Ailurus_fulgens.LNAC01001112.1                            211217 38 +    347723 --------------ta-tatC-A-AGTTCCTAATGCA-A-C----------T-----------ATTC----TG----AAAGTCTGA
i Ailurus_fulgens.LNAC01001112.1                         N 0 I 6
s Allactaga_bullata.AllBul_scaffold_20030                    10007 42 -     61208 gaaA-AG-A-AGAGCA-TAAC-A-AGTTCTT---------G----------T-----------ATTC----TG----GAAGTTTAA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 11
s Allenopithecus_nigroviridis.k141_3755588                   43330 42 +     53615 aggg-aa-a-agagta-tccc-a-agctccc---------c----------T-----------CCTC----TG----GAAATCTGA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39145 42 +     44087 aggg-aa-a-agagta-tccc-a-agctccc---------c----------T-----------CCTC----TG----GAAATCTGA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68066 42 -     84148 gggg-AA-A-AGAGTA-TCCC-A-AGCTCTT---------C----------T-----------CCTC----TG----GAAATCTGA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40289 42 -     78289 gggg-aa-a-agagta-tgcc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39737 42 +     55831 gggg-aa-a-agagta-tgcc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38178 42 -     64179 gggg-aa-a-agagta-tgcc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           19821 42 -     24835 gggg-aa-a-agagta-tgcc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             36804 42 +     45454 gggg-aa-a-agagta-tgcc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42503 42 +     70886 gggg-aa-a-agagta-tgcc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4630 42 +     30854 gggg-aa-a-agagta-tgcc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             28769 42 +     42133 gggg-aa-a-agagta-tgcc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583236 47 +   2318259 ggag-ag-a-catgta-tgcc-a-agtttgtca--ca-g-t----------t-----------attc----tg----gaaatCTGA
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      171983 52 -    412891 gaag-GG-A-AGGGG-ATGC--A-CACTCCGCACCCG-G-C----------T-----------GTAC----TGGCTGGCAGACTGA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48319 49 -     68529 tgag-ag-a-catgta-tgcc-a-agtttgtcacaca-c-t----------t-----------attc----tg----gaaatCTGA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46578 28 -     65372 gggg-AA-A-AGAGTA-TCCC-A-AGCTCTT---------C----------T-----------C----------------------
i Aotus_azarae.k141_118258                               C 0 I 11
s Aotus_griseimembra.k141_982342                             40326 28 +     43593 gggg-AA-A-AGAGTA-TCCC-A-AGCTCTT---------C----------T-----------C----------------------
i Aotus_griseimembra.k141_982342                         C 0 I 11
s Aotus_nancymaae.KZ198451.1                                668336 28 +   5030052 GGGG-AA-A-AGAGTA-TCCC-A-AGCTCTT---------C----------T-----------C----------------------
i Aotus_nancymaae.KZ198451.1                             C 0 I 11
s Aotus_trivirgatus.k141_192090                              19980 28 -     23494 gggg-AA-A-AGAGTA-TCCC-A-AGCTCTT---------C----------T-----------C----------------------
i Aotus_trivirgatus.k141_192090                          C 0 I 11
s Aotus_vociferans.k141_944972                                5114 28 +      8415 gggg-AA-A-AGAGTA-TCCC-A-AGCTCTT---------C----------T-----------C----------------------
i Aotus_vociferans.k141_944972                           C 0 I 11
s Aplodontia_rufa.AprRuf_scaffold_46868                       5542 42 -     32367 agag-ag-a-gGGACA-GGCC-A-AGTTCCT---------T----------T-----------ATTT----TG----TAAGTATGC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_789629                    1 17 -       318 -----------------------------------------------------------------AC----TGCCTGGCAGACTGA
i Artibeus_jamaicensis.ArtJam_scaffold_789629            N 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270566 42 +  21539123 gggg-AA-A-AGAGTA-TCCC-A-AGCTCTT---------C----------T-----------CCTC----TG----GAAATCTGA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6737 42 +     48076 aggg-AA-A-AGAGTA-TCCC-A-AGTTCTT---------C----------T-----------CCTC----TG----GAAATCTGA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   1872 42 -     28759 aggg-aa-a-agagta-tccc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29423 42 +     44353 gggg-AA-A-AGAGTA-TCCC-A-AGCTCTT---------C----------T-----------CCTC----TG----GAAATCTGA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              44798 42 -     71267 aggg-aa-a-agagta-tccc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                18854 42 -     33135 gggg-AA-A-AGAGTA-TCCC-A-AGCTCTT---------C----------T-----------CCTC----TG----GAAATCTGA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  1990 42 +     11645 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               1992 42 -     19611 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955069 49 -  23207421 ggag-ag-a-tgtata-tgcc-a-agtttgtcacacg-g-c----------t-----------ttcc----tg----gaagtCTGA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2277 49 -      4711 ggag-ag-a-tgtata-tgcc-a-agtttgtcacacg-g-c----------t-----------ttcc----tg----gaagtCTGA
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84223 47 +    124022 ggag-ag-a-catgta-tgcc-a-agtttgtca--ca-g-t----------t-----------attc----tg----gaaatCTGA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 4
s Bison_bison.KN261452.1                                     19752 45 +    288883 ggag-ag-a-catgta-tgcc-a-agtttgtca-g-----t----------a-----------attc----tg----gaaatCTGA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354139 45 +  48749331 ggag-ag-a-catgta-tgcc-a-agtttgtca-g-----t----------a-----------attc----tg----gaaatcTGA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      752711 45 +   1948126 ggag-ag-a-catgta-tgcc-a-agtttgtca-g-----t----------a-----------attc----tg----gaaatCTGA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27542846 45 -  45695690 ggag-ag-a-catgta-tgcc-a-agtttgtca-g-----t----------a-----------attc----tg----gaaatCTGA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1527866 49 -   4408762 ggag-ag-a-catgta-tgcc-a-agtttgtcacaca-g-t----------a-----------attc----tg----gaaatCTGA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   3757 42 +     28062 gagg-aa-g-agagta-tccc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39052 42 -     91139 gagg-aa-g-agagta-tccc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16577 42 +     95584 gagg-aa-g-agagta-tccc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16490 42 +    119600 gagg-aa-g-agagta-tccc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5692 28 -     13885 gggg-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Callimico_goeldii.k141_1609886                         C 0 I 11
s Callithrix_geoffroyi.k119_473390                           14377 28 +     17162 gggg-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Callithrix_geoffroyi.k119_473390                       C 0 I 11
s Callithrix_jacchus.pat_scaffold_3                      165449333 28 + 189096842 GGGG-AA-A-AGAGTA-TCCC-A-AGCTCTT---------C----------T-----------C----------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 11
s Callithrix_kuhlii.k119_404482                              15626 28 -     18408 gggg-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Callithrix_kuhlii.k119_404482                          C 0 I 11
s Camelus_bactrianus.KN276810.1                            7629062 49 +  17673402 ggag-ag-a-catggc-tgcc-a-agttcatcacaca-g-c----------t-----------ctgc----tg----gaagtCTGA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663348 49 +   7040546 ggag-ag-a-catggc-tgcc-a-agttcatcacaca-g-c----------t-----------ctgc----tg----gaagtCTGA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207008 49 +   1652518 ggag-ag-a-catggc-tgcc-a-agttcatcacaca-g-c----------t-----------ctgc----tg----gaagtCTGA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42500790 37 +  60362399 --------------TA-TG-C-A-AGTTCCTTATGCA-G-C----------T-----------ATTT----TG----AAAGTCTCA
i CanFam4.chr16                                          N 0 I 6
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4420 37 -     23171 --------------TA-TG-C-A-AGTTCCTTATGCA-G-C----------T-----------ATTT----TG----AAAGTCTCA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                N 0 I 6
s Canis_lupus_dingo.QKWQ01000480.1                          217781 37 +   9314153 --------------ta-tg-c-A-AGTTCCTTATGCA-G-C----------T-----------ATTT----TG----AAAGTCTCA
i Canis_lupus_dingo.QKWQ01000480.1                       N 0 I 6
s Canis_lupus_familiaris.chr16                            41610908 37 +  59632846 --------------ta-tg-c-A-AGTTCCTTATGCA-G-C----------T-----------ATTT----TG----AAAGTCTCA
i Canis_lupus_familiaris.chr16                           N 0 C 0
s Canis_lupus_orion.HG994398.1                            45102476 37 -  63665305 --------------ta-tg-c-A-AGTTCCTTATGCA-G-C----------T-----------ATTT----TG----AAAGTCTCA
i Canis_lupus_orion.HG994398.1                           N 0 I 6
s Capra_aegagrus.CM003241.1                               27406943 47 -  46296322 ggag-ag-a-catgta-tgct-a-agtttgtca--ca-g-t----------t-----------attc----tg----gaaatCTGA
i Capra_aegagrus.CM003241.1                              C 0 I 2
s Capra_hircus.CM004588.1                                 26589216 47 +  44709034 ggag-ag-a-catgta-tgct-a-agtttgtca--ca-g-t----------t-----------attc----tg----gaaatCTGA
i Capra_hircus.CM004588.1                                C 0 I 2
s Carlito_syrichta.NW_007259797.1                           265111 42 +    496798 GAAA-AA-A-AGAGTA-TCCC-A-AGCTCCT---------C----------T-----------ATTC----TG----GAAGTCTAA
i Carlito_syrichta.NW_007259797.1                        C 0 I 4
s Castor_canadensis.CasCan_scaffold_39952                    17948 16 -     39886 ggag-AA-G-AGAGAA-TGC------------------------------------------------------------------
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 27
s Catagonus_wagneri.CatWag_scaffold_2839                     74764 49 -    217609 ggag-ag-g-tgtgaa-tgct-g-aatgtgtcacaca-g-c----------t-----------gttc----tg----gaagACTGA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_748279                            966 28 -      1068 gagg-aa-a-agagta-tccc-a-agctctt---------c----------T-----------C----------------------
i Cebuella_niveiventris.k141_748279                      C 0 I 11
s Cebuella_pygmaea.k141_145798                               38797 28 +     53515 gagg-aa-a-agagta-tccc-a-agctctt---------c----------T-----------C----------------------
i Cebuella_pygmaea.k141_145798                           C 0 I 11
s Cebus_albifrons.Contig27                                  367025 28 -  26074798 gggg-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Cebus_albifrons.Contig27                               C 0 I 11
s Cebus_olivaceus.k141_1404781                                3914 28 -     34880 gggg-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Cebus_olivaceus.k141_1404781                           C 0 I 11
s Cebus_unicolor.k141_1654760                                63009 28 -     89041 gggg-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Cebus_unicolor.k141_1654760                            C 0 I 11
s Cephalopachus_bancanus.k141_1275952                        13393 29 -     50533 gaaA-AA-A-AGAGTA-TCCC-A-AGCTCCT---------C----------T-----------AT---------------------
i Cephalopachus_bancanus.k141_1275952                    C 0 I 7
s Ceratotherium_simum.JH767749.1                          15487696 49 -  27778364 gaag-ta-a-agtgta-cgcc-a-agttcctcacaca-g-c----------t-----------attc----cg----gaagtCTGA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14529 49 +     27315 gaag-ta-a-agtgta-cgcc-a-agttcctcacaca-g-c----------t-----------attc----cg----gaagtCTGA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136490 42 -   4669795 GGGG-AA-A-AGAGTA-TCCC-A-AGCTCCC---------C----------T-----------CCTC----TG----GAAATCTGa
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40231 42 +     47900 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40063 42 -     44860 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40045 42 -    148725 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23031 42 -     40656 cggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaagtCTGA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3039 42 +     20796 cggg-aa-a-agagta-tccc-a-agctccc---------c----------T-----------CCTC----TG----GAAATCTGA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7294 42 -     17524 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          22986 42 -     34525 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7706 42 -     25376 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaagtCTGA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360183 42 -  39242232 gggg-aa-a-agagta-tccc-a-agctccc---------c----------T-----------CCTC----TG----GAAATCTGA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266012 41 +  21565898 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaagtc-ga
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27457 42 -     45857 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23248 42 -     32606 gggg-aa-a-agagta-tccc-a-agctgcc---------c----------t-----------cctc----tg----GAAATCTGA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      26897 42 +     27662 cggg-aa-a-agagta-tccc-a-agctccc---------c----------T-----------CCTC----TG----GAAATCTGA
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           20947 42 +     70610 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaagtCTGA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         17812 42 +     36323 gggg-aa-a-agaata-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             26412 42 -     33796 ggaA-AG-A-AGACTA-TCTC-A-TGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              606 42 -     15404 ggaa-ag-a-agacta-tctc-a-tgtttct---------c----------t-----------attc----tg----gaagtCTGA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             4855 42 -     32913 gagg-aa-a-agagaa-tccc-a-agctctt---------c----------t-----------cctc----tg----gaaatcTGA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15268 42 -     40346 gagg-aa-a-agagaa-tccc-a-agctctt---------c----------t-----------cctc----tg----gaaatcTGA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15532 42 +    216457 gagg-aa-a-agagaa-tccc-a-agctctt---------c----------t-----------cctc----tg----gaaatcTGA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15310 42 +     39636 gagg-aa-a-agagaa-tccc-a-agctctt---------c----------t-----------cctc----tg----gaaatcTGA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16363 28 -     17061 ggga-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Chiropotes_albinasus.k141_2737257                      C 0 I 22
s Chiropotes_israelita.k141_313004                           38397 42 -    112038 gagg-aa-g-agagta-tccc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           3969 42 +     34062 gagg-aa-g-agagta-tccc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338710 42 +  18827391 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5314 42 -     44032 gggg-aa-a-agagta-tccc-a-agctccc---------c----------T-----------CCTC----TG----GAAATCTGA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300036 42 - 135778131 GGGG-AA-A-AGAGTA-TCCC-A-AGCTCCC---------C----------T-----------CCTC----TG----GAAATCTGa
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404567 42 -   2368649 GGAG-AA-A-AGGGTA-TCCC-A-CGCTCCT---------C----------T-----------CCTC----TG----GAAATCTGa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373757 42 - 200372422 GGTG-AA-A-AGGGCA-TCCC-A-CGCTCCT---------C----------T-----------CCTC----TG----GAAATCTGA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4451 42 -      6605 GGTG-AA-A-AGGGCA-TCCC-A-CGCTCCT---------C----------T-----------CCTC----TG----GAAATCTGA
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802668 25 +  53390261 -----------------------------CTCATACA-A-G----------T-----------ACTT----TG----GAAGTCTg-
i Condylura_cristata.JH655891.1                          I 17 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8217 53 +     10921 ggag-GG-A-AGAATA-TGC-TA-AGTTCCT-GAACA-G-C----------T------ACCGTATAC----TG----GAAATGTGA
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 38286 42 -     83289 ATGG-AA-G-ACATCA-TGGC-A-AGCTCCT---------C----------T-----------ATTA----TG----GAAGTCTGA
i Cricetomys_gambianus.CriGam_scaffold_14425             I 42 I 11
s Cricetulus_griseus.LT883664.1                          213112233 42 - 224834208 gtca-aA-A-ACAACA-GGAC-A-AATTCCT---------T----------T-----------CTCA----TG----GAAGTCTGA
i Cricetulus_griseus.LT883664.1                          I 44 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45184 47 -     47254 g--g-ag-a-ggagta-tgcc-a-aggtccttatgga-g-c----------t-----------attc----tg----gaagtCTGA
i Cryptoprocta_ferox.CryFer_flattened_line_24933         I 5 I 6
s Ctenodactylus_gundi.CteGun_scaffold_65                    640179 52 -   1526836 ggaa-ag-a-agagta-tgct-g-aggtcct---------cTCTTCTAGAAA-----------ATTC----TA----GAAACCTGA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 2
s Daubentonia_madagascariensis.ctg71                        288429 42 +  12879189 ggag-AG-A-AGACTA-TCCC-C-AGTTTCT---------C----------T-----------ACGC----TG----GAAGTCTGC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623402 49 -  35494412 ggag-ag-a-tgtata-tgcc-a-agtttatc--gcacggc----------t-----------ttcc----tg----gaagtCTGA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660122 49 -   1390856 gaag-ta-a-agtgta-ggcc-a-agttcctcacaca-g-c----------t-----------gttc----tg----gaagtCTga
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134517 49 -    198055 gaag-ta-a-agtgta-tgcc-a-agttcctcacaca-g-c----------t-----------attc----cg----gaagtCTGA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               1595 48 +     19438 agag-ag-a-agacta-tgc-ca-gattcctcacaca---t----------t-----------atac----tg----gaaatctga
i Eidolon_helvum.AWHC01266696.1                          I 3 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237609 49 -    607251 ggag-ag-a-catgta-tgcc-a-agtttgtcacaca-g-t----------t-----------attc----tg----gaaatCTGA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          26108 42 +    110024 ATGG-AA-G-ACAACA-TGAA-A-AATTCCT---------T----------T-----------GTTA----TA----GAAGTCTGA
i Ellobius_lutescens.LOEQ01008920.1                      I 44 I 11
s Ellobius_talpinus.LOJH01026522.1                            8026 42 +     18970 ATGG-AA-G-ACAACA-TGAA-A-AATTCCT---------T----------T-----------GTTA----TA----GAAGTCTGA
i Ellobius_talpinus.LOJH01026522.1                       I 44 I 11
s Enhydra_lutris.KZ291758.1                               24905774 38 +  41312741 --------------ta-tgTC-A-AGTTCCTAATGTA-A-C----------T-----------ATTC----TG----AAAATCTGA
i Enhydra_lutris.KZ291758.1                              N 0 C 0
s Eptesicus_fuscus.JH977646.1                             12572653 47 +  14770903 gaag-ga-g-agg--g-tat--cacgttcctcataca-g-a----------t-----------gtat----tg----gaagCCTGA
i Eptesicus_fuscus.JH977646.1                            C 0 I 9
s Equus_asinus.JREZ01000139.1                              3037153 49 -   4378816 gaaa-tg-a-agtgta-ctcc-a-ggttcctcacaca-g-c----------t-----------attc----tg----gaaatCTGA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371084 49 +  39960074 gaaa-tg-a-agtgta-ctcc-a-ggttcctcacaca-g-c----------t-----------attc----tg----gaaatCTGA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              407870 49 -    498745 gaaa-tg-a-agtgta-ctcc-a-ggttcctcacaca-g-c----------t-----------attc----tg----gaaatCTGA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258267 41 +  21539334 gggg--a-a-agagta-cccc-a-ggctccc---------c----------T-----------CCTC----TG----GAAATCTGA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           62950 49 -    133382 ggag-ag-a-tgtata-tgcc-a-agcttgtcacacg-g-c----------t-----------ttcc----tg----gaagtCTGA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3164 49 +      7672 ggag-ag-a-tgtata-tgcc-a-agtttgtcacacg-g-c----------t-----------ttcc----tg----gaagtCTGA
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11390 42 -     24895 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----TAAGTCTAA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39102 42 -     70999 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----TAAGTCTAA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83062 42 +    112731 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----TAAGTCTAA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39634 42 +     68309 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----TAAGTCTAA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 49959 42 -     65740 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----TAAGTCTAA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20589 42 -     75513 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----TAAGTCTAA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 44782 42 -     97555 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----TAAGTCTAA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1509 42 +     30972 ggaA-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39232 42 -     52037 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----TAAGTCTAA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55633 42 -    111500 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----TAAGTCTAA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242176 47 - 206538554 g--t-ag-a-ggagta-tgcc-a-agttcctcatgta-g-c----------t-----------attc----tg----gaagGCtga
i Felis_catus.CM001381.2                                 I 5 I 6
s Felis_catus_fca126.CM031415.1                          185111952 47 - 205367284 g--t-ag-a-ggagta-tgcc-a-agttcctcatgta-g-c----------t-----------attc----tg----gaaggctga
i Felis_catus_fca126.CM031415.1                          I 5 I 6
s Felis_nigripes.FelNig_flattened_line_31944                 23324 47 -     30238 g--g-ag-a-ggagta-tgcc-a-agttcctcatgta-g-c----------t-----------attc----tg----gaagGCTGA
i Felis_nigripes.FelNig_flattened_line_31944             I 5 I 6
s Galeopterus_variegatus.GalVar_scaffold_74466               14149 42 +     18121 ggag-ag-a-agagtg-tgct-g-agctcct---------g----------t-----------attc----tg----gaagtCTGA
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89286 49 -     95226 tgag-ag-a-caggta-tgcc-a-agtttgtcacaca-g-t----------t-----------attc----tg----gaaatCTGA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31168 23 -     36801 ggag-ag-a-agggca-tgct-g-agctc---------------------------------------------------------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 25
s Gorilla_beringei.k141_3358224                                378 42 -      1229 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Gorilla_beringei.k141_3358224                          n 42 I 144
s Gorilla_gorilla.LT578341.1                                249872 42 - 186649187 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   10776 23 +     11903 ggag-ag-a-ccggca-tgct-g-agctT---------------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 I 24
s Hapalemur_alaotrensis.k141_330369                          11323 42 -     40692 ggag-AG-A-AGACTA-CCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32725 42 +     49394 ggag-AG-A-AGACTA-CCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57593 42 -     66874 ggag-AG-A-AGACTA-CCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6470 42 -     42923 ggag-AG-A-AGACTA-CCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13466 42 -     53142 ggag-AG-A-AGACTA-CCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26122 47 -    327341 g--g-ag-a-ggagta-tgcc-a-agttcctcatgta-g-c----------t-----------attc----tg----gaagtCTGA
i Helogale_parvula.HelPar_flattened_line_2585            I 1 I 6
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7049 47 +     48891 ggag-ag-a-catgta-tgcc-a-agtttgtca--ca-g-t----------t-----------attc----tg----gaaatCTGA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10597 20 +     12639 -gAG-CA-A-AGAGTA-TGCT-G-GGC-----------------------------------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 I 16
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5648 49 -     36432 ggag-ag-a-tgtgta-tgcc-a-agtttgtcacaca-g-c----------t-----------attc----tg----gaaatCTGA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545464 48 -   1711038 ggag-aa-a-agagta-tgc-ta-aattcctca-aca-g-c----------t-----------atac----tg----gaagtCTGA
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               44755 48 +     49977 ggag-aa-a-agagta-tgt-ta-agttcctca-gca-g-c----------t-----------atac----tg----gaagtCTGA
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    137772 42 -    630532 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                                800 42 +     12352 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               7983 42 +     55766 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047327 42 + 191637585 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796659 42 +  11177569 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2498 42 -    135385 ggag-ag-a-agaaca-cgct-g-aattcct---------t----------a-----------ATTC----TA----GAAATCTGA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 8
s Ictidomys_tridecemlineatus.JH393364.1                     374592 42 +   7955117 ggag-ag-a-agggca-tgtg-g-agctcat---------t----------t-----------attt----tg----gaaatatgg
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2435083                                     670 42 +      1070 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------GTTC----TG----GAAGTATGA
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1184 49 -     16823 ggag-ag-a-tgtata-tgcc-a-agtttat--tgcacggc----------t-----------ttcc----tg----gaagtCTGG
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1232432 42 +   9596543 GAAA-AG-A-AGAGTA-TAAC-A-AGTTCCT---------G----------T-----------ATTC----TG----GAAGTTTAA
i Jaculus_jaculus.JH725527.1                             C 0 I 11
s Kogia_breviceps.KogBre_flattened_line_3970                 63689 49 -     97402 gggg-ag-a-tgtata-tgcc-a-ggtttgtcacaca-g-c----------t-----------ttcc----tg----gaagtCTGA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39118 42 +    110728 gggg-AA-A-AGAGTA-TCTC-A-AGCTCTT---------C----------T-----------CCTC----TG----GAAATCTGA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    27470 47 -     49555 gacg-gg-G-AGG--G-TAT--CACATTCCTCACACA-G-A----------T-----------GTAT----TG----GGAGTCTGA
i Lasiurus_borealis.LasBor_scaffold_26245                n 68 I 9
s Lemur_catta.scaffold_24                                 14756115 42 +  30322482 ggag-AG-A-AGACTA-CCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        4774 28 -      5330 ggga-aa-a-agggta-tccc-a-agctctt---------c----------T-----------C----------------------
i Leontocebus_fuscicollis.k141_3469711                   C 0 I 11
s Leontocebus_illigeri.k141_2813249                          16211 28 -     16762 ggga-aa-a-agggta-tccc-a-agctctt---------c----------T-----------C----------------------
i Leontocebus_illigeri.k141_2813249                      C 0 I 11
s Leontocebus_nigricollis.k141_5626589                       16510 28 -     17065 ggga-aa-a-agggta-tccc-a-agctctt---------c----------T-----------C----------------------
i Leontocebus_nigricollis.k141_5626589                   C 0 I 11
s Leontopithecus_chrysomelas.k141_1327670                     6035 28 -     11567 ggga-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Leontopithecus_chrysomelas.k141_1327670                C 0 I 11
s Leontopithecus_rosalia.k141_349454                          7416 28 -     12945 ggga-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Leontopithecus_rosalia.k141_349454                     C 0 I 11
s Lepilemur_ankaranensis.k141_567626                          4769 42 +     29618 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------TTTC----TG----GAAGTCTGA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4768 42 +     31569 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------TTTC----TG----GAAGTCTGA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          4776 42 +     24756 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------TTTC----TG----GAAGTCTGA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       4773 42 +     16388 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------TTTC----TG----GAAGTCTGA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        808858 36 -   3914936 -----------------tgtC-A-AGTTCCTAATGCA-G-C----------T-----------ATTC----TG----AAAGTctga
i Leptonychotes_weddellii.KB714746.1                     N 0 I 6
s Lipotes_vexillifer.KE559953.1                             332707 49 +    662738 ggag-ag-a-tgtata-tgcc-a-agtttatc--gcacggc----------t-----------ttcc----tg----gaagtCTGA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328446 42 -   1826925 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39075779 21 +  43346337 GGAG-AG-A-AGAGTA-TGCT-G-AGC-----------------------------------------------------------
i Loxodonta_africana.GL010049.1                          C 0 I 16
s Lycaon_pictus.CM007581.1                                41610063 37 +  59628241 --------------ta-tg-c-A-AGTTCCTTATGCA-G-C----------T-----------ATTT----TG----AAAGTCTCA
i Lycaon_pictus.CM007581.1                               N 0 C 0
s Macaca_arctoides.k141_1757516                              40727 42 -     61512 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368355 42 -  60120075 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20674 42 +     30207 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           17777 42 -     24934 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------ccgc----TG----GAAATCTGA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20561 42 +     30527 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31750 42 -     50087 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41488 42 +     51645 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410062 42 - 187317192 GGGG-AA-A-AGAGTA-TCCC-A-AGCTCCC---------C----------T-----------CCTC----TG----GAAATCTGA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              394945 42 +  25927173 GGGG-AA-A-AGAGTA-TCCC-A-AGCTCCC---------C----------T-----------CCTC----TG----GAAATCTGA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44077 42 -     62418 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                20764 42 +     24253 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40521 42 +     59329 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266353 42 +    668171 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17699 42 +     21031 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31431 42 +     33478 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218673 49 -    270270 ggca-ag-a-agactg-tgc-ca-gattcctcacaca-g-t----------t-----------atac----tg----gaaatCTGA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        317829 42 +  24302211 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352661 42 -    752769 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669419 49 -    737560 ggag-aa-a-agagta-tgcc-a-agttcctcatgca-g-c----------t-----------attt----tg----gaTGCCTGA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             216715 49 +    317179 ggag-aa-a-agagta-tgcc-a-agttcctaatgca-g-c----------t-----------attt----tg----gaTGCCTGA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7488692 42 +  40650429 ggag-ag-a-agggca-tgtg-g-agctcat---------t----------t-----------attt----tg----gaaatatgg
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       145730 48 +    207569 ggaa-ag-a-agacta-tgc-ca-cgttcctga-aca-g-c----------t-----------atat----tg----aaagtGTGA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             13788 38 -     74585 --------------TA-TGTC-A-AGCTCCTAATGTA-A-C----------T-----------ATTC----TG----AAAGTCTGA
i Mellivora_capensis.MelCap_flattened_line_19308         N 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 44648 42 -    140813 ATGA-AA-G-ACAATG-CAAC-A-AGCTCCT---------T----------T-----------ATTT----TG----GAAGCCTGA
i Meriones_unguiculatus.MerUng_scaffold_7390             I 44 I 10
s Mesocricetus_auratus.KB708134.1                         17426746 42 +  29670104 gtga-aa-g-ACAACA-GGAC-A-AATTCCT---------T----------T-----------CTCA----TG----GAAGTCTGA
i Mesocricetus_auratus.KB708134.1                        I 45 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79249 49 +     93471 ggag-ag-g-tgtata-tgcc-a-agtttgtcgcaca-g-c----------t-----------ttcc----tg----gaagtCTGA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 5800 28 +     17804 gggg-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Mico_argentatus.k141_582562                            C 0 I 11
s Mico_humeralifer.k141_1180625                               6572 28 -     12984 gggg-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Mico_humeralifer.k141_1180625                          C 0 I 11
s Mico_schneideri.k141_1877700                                     14535 28 -     26561 gggg-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Mico_schneideri.k141_1877700                                 C 0 I 11
s Microcebus_murinus.CM007674.1                           74980374 41 +  93316391 GGAG-AG-A-AG-CTA-TCCC-A-CGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                179991 51 +    200668 gaag-GG-A-AGGGG--TGC--A-CACTCTGCATGCA-G-C----------T-----------GTAT----CAGCTGGCAGACTCA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15959524 42 +  27267610 ATGG-AA-G-ACAACC-TGAA-A-AATTCCT---------T----------T-----------GTTA----TG----GAAGTCTGa
i Microtus_ochrogaster.CM001695.1                        I 44 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360379 31 -   8254450 ------------------------cgttcttcacaca-g-c----------t-----------ttac----tg----gaagtCCAA
i Miniopterus_natalensis.LDJU01000034.1                  I 16 I 9
s Miniopterus_schreibersii.MinSch_scaffold_23309             39273 31 -     48117 ------------------------cgttcttcacaca-g-c----------t-----------ttac----tg----caagtCCAA
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 16 I 9
s Miopithecus_ogouensis.k141_1534655                         17740 42 -     27822 gggg-aa-a-agagta-tccc-a-aactccc---------c----------t-----------cctc----tg----gaaatcTGA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         3875 38 +     27589 --------------TA-TGTC-A-AGTTCCTAATGCA-G-C----------T-----------ATTC----TG----AAAGTCTGA
i Mirounga_angustirostris.MirAng_flattened_line_54046    N 0 I 6
s Mirza_zaza.k141_766280                                     48236 42 -     62432 agag-ag-a-agacta-tccc-a-cgtttct---------c----------t-----------attc----tg----gaagtCTGA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351145 49 +    437263 ggag-ag-a-tgtata-tgcc-a-agtttatc--gcacggc----------t-----------ttcc----tg----gaagtCTGA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174179 34 +    366855 gaag-GG-A-ATGGTA-GGC--A-CATTCCACACACA-G-C----------T-----------G----------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_13123                  22202 49 -     82753 ggag-ag-a-catgta-tgcc-a-agtttgtcacaca-g-t----------t-----------attc----tg----gaaatCTGA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   13899 47 -     63510 g--g-ag-a-ggaata-tgcc-a-agttccccatgta-g-c----------t-----------attc----tg----gaagtCTGA
i Mungos_mungo.MunMun_flattened_line_18455               I 5 I 6
s Murina_feae.MurFea_scaffold_17764                          33089 47 +     47283 gtag-gg-g-AGG--G-TAT--CACGTTCCTCATACA-G-G----------T-----------TCAT----TG----GAGGCCTGA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35584758 42 + 120012414 ATGG-AA-G-ACATTA-TGAT-A-AGCTCCT---------T----------T-----------ATTG----TG----GAAGCCTGA
i Mus_caroli.LT608237.1                                  I 44 C 0
s Mus_musculus.chr8                                       41679149 42 + 129401213 agga-aa-g-acatCA-TGAT-A-AGCTCCT---------T----------T-----------ATTA----TG----GAAGCCTGA
i Mus_musculus.chr8                                      I 44 C 0
s Mus_pahari.LT608297.1                                   58212773 42 +  89631738 GTGG-AA-G-ACATCA-TGAT-A-AGCTCCT---------T----------T-----------ATCA----TG----GAAGCCTGA
i Mus_pahari.LT608297.1                                  I 44 C 0
s Mus_spretus.CM004101.1                                  39486258 42 + 130317789 agga-aa-g-acatCA-TGAT-A-AGCTCCT---------T----------T-----------ATTA----TG----GAAGCCTGA
i Mus_spretus.CM004101.1                                 I 44 I 11
s Muscardinus_avellanarius.MusAve_scaffold_12866             79575 23 -     86153 ggag-ag-a-aagaca-tgct-g-agctc---------------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 28
s Mustela_putorius.JH418006.1                             14342788 38 +  14710649 --------------ta-tGTC-A-AGTTCCTAATGTA-A-C----------T-----------ATTC----TG----AAAGTCTGA
i Mustela_putorius.JH418006.1                            N 0 C 0
s Myotis_brandtii.KE162005.1                               9787538 47 +  10118263 gaag-GG-A-AGG--G-TAT--CAGGTTCCTCATACA-G-A----------T-----------GTAT----TG----GAGGCCTGA
i Myotis_brandtii.KE162005.1                             C 0 I 9
s Myotis_davidii.KB100139.1                                4377924 47 +   6019432 gaag-gg-a-agg--a-tat--cacgttcctcaTACA-G-A----------T-----------GTAT----TG----CAAGCCTGA
i Myotis_davidii.KB100139.1                              C 0 I 9
s Myotis_lucifugus.GL432175.1                                18168 47 -     39439 gaag-gg-a-agg--g-tat--caggttcctcataca-g-a----------t-----------gtat----tg----gaagccTAA
i Myotis_lucifugus.GL432175.1                            C 0 I 9
s Myotis_myotis.MyoMyo_scaffold_185951                        1482 47 +      3929 gaag-gg-a-agg--a-tat--cacgttcctcataca-g-a----------t-----------gtat----tg----gaagccTGA
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 I 9
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108629 27 +    130748 ---------------------------------------------------caacacataaccattc----tg----gaagtCTGA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 21 C 0
s Nasalis_larvatus.k141_1350636                              24105 42 +     34575 aggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464273 38 -  31847680 --------------ta-tGTC-A-AGTTCCTAAGGCA-G-C----------T-----------ATTC----TG----AAAGTCTGA
i Neomonachus_schauinslandi.NINY01007730.1               N 0 I 6
s Neophocaena_asiaeorientalis.KZ687982.1                   1225318 49 -   7148211 ggag-ag-a-tgtata-tgcc-a-agtttatc--gcacggc----------t-----------ttcc----tg----gaagtCTGA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   120122 48 -    149072 gaag-gg-a-agggta-cgc--a-cattctgcacaca-g-c----------t-----------gtat----tg----gaagtCTGA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49057 42 -    132029 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5153 42 -     16345 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11036 42 +     22201 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409373 42 -  22158432 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21436 42 -     54323 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193674 37 +   9404916 --------------ta-tg-c-a-AGTTCCTTATGCA-G-C----------T-----------ATTT----TG----AAAGTCTGA
i Nyctereutes_procyonoides.CAJHUB010000658.1             N 0 I 6
s Ochotona_princeps.JH802162.1                             2566472 40 -   3988456 agaa-ag-a-agagTA-TTCT-G---TTTCC---------C----------T-----------ATTC----TA----GAAGGAATA
i Ochotona_princeps.JH802162.1                           C 0 I 62
s Odobenus_rosmarus.KB229312.1                             1447045 38 +   2017862 --------------ta-tgtc-a-AGTTCCTAATGCA-G-C----------T-----------ATTC----TG----AAAGTCTGa
i Odobenus_rosmarus.KB229312.1                           N 0 I 6
s Odocoileus_virginianus.KZ100018.1                         434179 49 -    630418 ggag-ag-a-catgta-tgcc-a-aatttgtcacaca-g-t----------t-----------attc----tg----gaaatCTGA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12169 49 +    150152 tgag-ag-a-caggta-tgcc-a-agtttgtcacaca-g-t----------t-----------attc----tg----gaaatCTGA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    85780 41 -    140218 ATGG-AA-G--CAACA-CGAA-A-AGTTTCT---------T----------T-----------GTTA----TG----GAAGTCTGA
i Ondatra_zibethicus.OndZib_scaffold_7387                I 44 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   103109 42 +    107918 ATGG-AG-G-ACAACA-TGAC-A-AGTTCTT---------T----------T-----------GTTG----TG----GATGTCTGA
i Onychomys_torridus.OnyTor_scaffold_2487                I 44 I 11
s Orcinus_orca.KB316932.1                                  8094583 49 +  10937097 ggag-ag-a-tgtata-tgcc-a-agtttatc--gcacggc----------t-----------ttcc----tg----gaagtCTGA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107098781 42 - 174332312 ACAA-AG-A-AGAGTA-CGCT-G-AGGTTCC---------C----------T-----------GTTC----TG----GAAGGCAgg
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        34739 37 +    559221 --------------ta-tg-c-A-AGTTCCTTATGCA-G-C----------T-----------ATTT----TG----AAAGTCTGA
i Otocyon_megalotis.JAEUCK010005147.1                    N 0 I 6
s Ovis_aries.CM001607.2                                   26402167 47 -  44047080 ggag-ag-a-catgta-tgcc-a-agtttgtca--ca-g-t----------t-----------attc----tg----gaaatCTGA
i Ovis_aries.CM001607.2                                  C 0 I 2
s Ovis_canadensis.OviCan_scaffold_67953                       2686 47 +     17875 ggag-ag-a-catgta-tgcc-a-agtttgtca--ca-g-t----------t-----------attc----tg----gaaatCTGA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 2
s Pan_troglodytes.KZ622849.1                                 28344 42 -    110857 GGGG-AA-A-AGAGTA-TCCC-A-AGCTCCT---------C----------T-----------CCTC----TG----GAAATCTGA
i Pan_troglodytes.KZ622849.1                             n 42 I 319
s Panthera_onca.PanOnc_flattened_line_3271                   19900 47 -    230217 g--g-ag-a-ggagta-tgcc-a-agttcctcatgta-g-c----------t-----------attc----tg----gaagGCTGA
i Panthera_onca.PanOnc_flattened_line_3271               I 5 I 6
s Panthera_pardus.KV860321.1                              18457222 47 -  18783137 g--g-ag-a-ggagta-tgcc-a-agttcctcatgta-g-c----------t-----------attc----tg----gaagGCTGa
i Panthera_pardus.KV860321.1                             I 5 I 6
s Panthera_tigris.KE722367.1                               3967959 47 +   8748460 g--g-ag-a-ggagta-tgcc-a-agttcctcatgta-g-c----------t-----------attc----tg----gaagGCTGa
i Panthera_tigris.KE722367.1                             I 5 I 6
s Pantholops_hodgsonii.KE114653.1                          1613615 47 +   2937107 ggac-ag-a-cgtgta-tgcc-a-agtttgtca--ca-g-t----------t-----------actc----tg----gaaACCTGA
i Pantholops_hodgsonii.KE114653.1                        C 0 I 2
s Papio_anubis.CM001495.2                                   238673 42 - 183742232 GGGG-AA-A-AGAGTA-TCCC-A-AGCTCCC---------C----------T-----------CCTC----TG----GAAATCTGA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5140 42 +     21308 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286177 42 -  20919399 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  17793 42 -     27687 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    10929 42 +     16796 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17739 42 -     23640 gggg-aa-a-agagta-tccc-a-agctccc---------c----------t-----------cctc----tg----gaaatcTGA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10823 47 +     78924 g--g-ag-a-ggagta-tgcc-a-agttcctcatgta-g-c----------t-----------attc----tg----aaagtCTGA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 I 6
s Peromyscus_maniculatus.KI615324.1                         242773 42 +  18517816 ATGG-AG-G-ACAACT-TGAC-A-AGTTCCT---------T----------T-----------GTTA----TG----GATGTCTGA
i Peromyscus_maniculatus.KI615324.1                      I 46 I 11
s Phocoena_phocoena.PhoPho_flattened_line_46867              10446 49 -     15039 ggag-ag-a-tgtata-tgcc-a-agtttatc--gcacggc----------t-----------ttcc----tg----gaagtCTGA
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4559 42 +      7560 gggg-aa-a-agggta-ttcc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60266 42 -     63152 gggg-aa-a-agggta-ttcc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            42865 42 +     45295 gggg-aa-a-agggta-ttcc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     544 42 +      5735 GGGG-AA-A-AGGGTA-TTCC-A-AGCTCCT---------C----------T-----------CCTC----TG----GAAATCTGA
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            44832 47 +     46691 gaag-AA-G-AGG--G-TAT--CACATTTCTCATACA-G-A----------T-----------GTAT----TG----GAAGCCAGA
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 I 9
s Pithecia_albicans.k141_1239476                             60746 42 +    207309 gagg-aa-a-agagta-tccc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          1866 42 -     25401 gagg-aa-a-agagta-tccc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27581 42 +     58159 gagg-aa-a-agagta-tccc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         27857 42 +     63561 gagg-aa-a-agagta-tccc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27620 42 +     51148 gagg-aa-a-agagta-tccc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552615 42 -   4542175 gagg-aa-a-agagta-tccc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27604 42 +     51125 gagg-aa-a-agagta-tccc-a-agctctt---------c----------T-----------CCTC----TG----GAAATCTGA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2529 50 -      8168 ggag-ag-attgtata-tgcc-a-agtttgt--tgcacggc----------t-----------ttcc----tg----gaagtcTGA
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4039 42 +     39866 gagg-aa-a-agagta-tccc-a-agctgtt---------c----------t-----------cctc----tg----gaaatcTGA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_89578                           3823 42 -      4004 gagg-aa-a-agagta-tccc-a-agctgtt---------c----------t-----------cctc----tg----gaaatcTGA
i Plecturocebus_brunneus.k141_89578                      C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38528 42 -     87950 gagg-aa-a-agagta-tccc-a-agctgtt---------c----------t-----------cctc----tg----gaaatcTGA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     38921 42 -     88961 gagg-aa-a-agagta-tccc-a-agctgtt---------c----------t-----------cctc----tg----gaaatcTGA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3621 42 -     39403 gagg-aa-a-agagta-tccc-a-agctgtt---------c----------t-----------cctc----tg----gaaatcTGA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38574 42 +     87928 gagg-aa-a-agagta-tccc-a-agctgtt---------c----------t-----------cctc----tg----gaaatcTGA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3617 42 -     60166 gagg-aa-a-agagta-tccc-a-agctgtt---------c----------t-----------cctc----tg----gaaatcTGA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10553 42 -     67232 gagg-aa-a-agagta-tccc-a-agctgtt---------c----------t-----------cctc----tg----gaaatcTGA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38470 42 -     90634 gagg-aa-a-agagta-tccc-a-agctgtt---------c----------t-----------cctc----tg----gaaatcTGA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          39937 42 +     89403 gagg-aa-a-agagta-tccc-a-agctgtt---------c----------t-----------cctc----tg----gaaatcTGA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   172877 42 - 189387572 GGGG-AA-A-AGAGTA-TCCC-A-AGCTCCT---------C----------T-----------CCTC----TG----GAAATCTGA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      187875 42 -   9816681 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23045 42 +     69807 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40240 42 -     80239 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7745 20 +     14086 -gAG-CA-A-AGAGTA-TGCT-G-GGC-----------------------------------------------------------
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 I 16
s Prolemur_simus.MPIZ01000396.1                            1979273 42 +   4620579 GGAG-AG-A-AGACTA-CCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1561855 42 -   2598838 GGAG-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          78948 42 -     79582 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                               93 42 -     11706 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            3828 42 -     30655 ggag-AG-A-AGACTA-TCCC-A-AATTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30157 42 +     46564 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90448 42 -     98465 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------GTTC----TG----GAAGTCTGA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4070 42 +     35169 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            32142 42 +     52041 ATGA-AA-G-ACAACA-CAAC-A-AGCTCCT---------T----------T-----------ATTA----TG----GAAGCCTGA
i Psammomys_obesus.NESX01036366.1                        I 44 C 0
s Pteronotus_parnellii.KE847780.1                            47239 52 -     66298 gaag-gg-a-agtacg-tgc--a-cattccgcacaca-g-c----------t-----------ctactggCTG----GCAGTCTAA
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          3926 38 -     10349 --------------TA-TGTC-A-AGTTCCTAATTTA-A-C----------T-----------ATTC----TG----AAAGTCTGA
i Pteronura_brasiliensis.PteBra_flattened_line_59017     N 0 C 0
s Pteropus_alecto.KB030862.1                               5836138 49 -  28871421 ggag-aa-a-agacta-tgc-ca-gattcctcacacg-g-t----------t-----------atac----tg----gaaatCtga
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3532714 49 -   4952924 ggag-aa-a-agacta-tgc-ca-gattcctcacaca-g-t----------t-----------atac----tg----gaaatCtga
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18094784 47 +  38429054 g--g-ag-a-ggagta-tgcc-a-agttcctcatgta-g-c----------t-----------attc----tg----gaagGCtga
i Puma_concolor.QAVW01001104.1                           I 5 I 6
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51136 49 +     55069 ggag-ag-a-catgta-tgcc-a-aatttgtcacaca-g-t----------t-----------attc----tg----gTAATCTGA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 8
s Rattus_norvegicus.chr16                                 37011487 42 -  90668790 ATGG-AA-G-ACATCA-TGAT-A-AGCTCCT---------T----------T-----------ATTA----TG----GAAGCCTGA
i Rattus_norvegicus.chr16                                I 44 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2908235 48 +   3329780 ggag-ag-a-agagta-tgc-ca-acttcctca-aaa-g-c----------t-----------atac----tg----gaagtCTTA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 5
s Rhinopithecus_bieti.k119_221883                            24263 42 +     27361 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117622 42 + 195417433 GGGG-AA-A-AGAGTA-TCCC-A-AGCTCCT---------C----------T-----------CCTC----TG----GAAATCTGA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             231871 42 -   7961872 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70190 49 -    116970 ggag-ag-a-agacta-tgc-ca-gattcctcacaca-g-t----------t-----------atac----tg----gaaatCTGA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 3 C 0
s Saguinus_bicolor.k141_1125626                              16266 28 +     16959 ggga-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Saguinus_bicolor.k141_1125626                          C 0 I 11
s Saguinus_geoffroyi.k141_2310874                            38116 28 +     72255 ggga-aa-a-agtgta-tccc-a-agctctt---------c----------t-----------c----------------------
i Saguinus_geoffroyi.k141_2310874                        C 0 I 11
s Saguinus_imperator.k141_1164420                            10757 28 +     11432 ggga-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Saguinus_imperator.k141_1164420                        C 0 I 11
s Saguinus_inustus.k141_2555509                              16132 28 -     16755 ggga-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Saguinus_inustus.k141_2555509                          C 0 I 11
s Saguinus_labiatus.k141_3072636                             14702 28 -     15289 ggga-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Saguinus_labiatus.k141_3072636                         C 0 I 11
s Saguinus_midas.LG03                                       386698 28 - 209938924 ggga-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Saguinus_midas.LG03                                    C 0 I 11
s Saguinus_mystax.k141_2237965                                7563 28 +     22212 ggga-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Saguinus_mystax.k141_2237965                           C 0 I 11
s Saguinus_oedipus.k141_1808308                              16060 28 +     39756 ggga-aa-a-agtgta-tccc-a-agctctt---------c----------t-----------c----------------------
i Saguinus_oedipus.k141_1808308                          C 0 I 11
s Saiga_tatarica.SaiTat_scaffold_39512                        5756 47 +     16473 ggag-ag-a-catgta-tgcc-g-agtttgtcacg---g-t----------t-----------attc----tg----gaaAACTGA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 4
s Sapajus_apella.ctg103                                     234249 28 +   5703754 gggg-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Sapajus_apella.ctg103                                  C 0 I 11
s Sapajus_macrocephalus.k141_796559                           3839 28 +     21866 gggg-aa-a-agagta-tccc-a-agctctt---------c----------t-----------c----------------------
i Sapajus_macrocephalus.k141_796559                      C 0 I 11
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111726 25 +    313613 -----------------------------CTCATACA-A-G----------T-----------ATTT----GG----GAAGTCTC-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 16 I 3
s Semnopithecus_entellus.k141_158471                         20753 42 +     27374 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24268 42 +     58920 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           10765 42 -     45317 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18422 42 -     42441 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21104 42 -     29113 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24176 42 -     48123 gggg-aa-a-agagta-tcca-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    44060 42 +     77746 ACGG-AA-G-ATAATC-TGAC-A-AGTTTCT---------T----------T-----------GTTA----TG----GAAGTCTGA
i Sigmodon_hispidus.SigHis_scaffold_20193                I 44 I 11
s Solenodon_paradoxus.SolPar_flattened_line_126            1853897 47 -   1910179 gga--ga-a-agtgta-tgc-ca-agttcctcacaca-a-c----------t-----------gtta----tg----gaaggctg-
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1854906 42 +   3870691 ggag-ag-a-agggca-tgtg-g-agctcat---------t----------t-----------attt----tg----gaaatatgg
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              1790 35 -     97271 --------------TA-TGTC-A-AGTTCCA---AAT-G-C----------T-----------ATTC----TG----AAAGTCTGA
i Spilogale_gracilis.SpiGra_flattened_line_13525         N 0 I 6
s Suricata_suricatta.SurSur_flattened_line_6629             120495 47 +    196729 g--g-ag-a-ggagta-tgcc-a-agttcctcatgta-g-c----------t-----------attc----tg----gaagtCTGA
i Suricata_suricatta.SurSur_flattened_line_6629          I 5 I 6
s Sus_scrofa.CM000828.4                                    6639232 49 +  69701581 ggag-ag-a-tgtgta-tgct-g-agtgtgtcataca-g-c----------t-----------attc----ca----gaagtCtga
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386349 42 +   1523678 aggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                10866 17 +     22964 ----------------------------------------c----------t-----------gtac----tg----gaagtcccA
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 19 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                23586 27 -     25844 ---------------------------------------------------caacacatagccattc----tg----gaagtCTGA
i Tamandua_tetradactyla.TamTet_scaffold_67439            I 21 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      186945 49 +    199430 gaag-ta-a-agtgca-cacc-a-agttcttcacaca-a-c----------t-----------attc----ta----gaagtCTGA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    100904 49 -    539355 gaag-ta-a-agtgca-cgcc-a-agtgcttcacaca-a-c----------t-----------attc----ta----gaagtCTGA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                2715 42 +      6850 gaaA-AA-A-AGAATA-TCCC-A-AGCTCCT---------C----------T-----------ATTC----TG----GAAATCTAA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                2797 42 +     20590 gaaa-aa-a-agagta-tccc-a-agctcct---------c----------t-----------attc----tg----gaaatCTAA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348658 42 - 186847797 GGGG-AA-A-AGAGTA-TCCC-A-AGCTCCC---------C----------T-----------CCTC----TG----GAAATCTGa
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475028 52 -    610378 gaag-gg-a-agggga-cgc--a-cgccccgcacaca-g-c----------t-----------gtac----cggTTGGCAGACTGA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16317 42 +     26378 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     28998 42 -     78344 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15638 42 +     25722 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      23861 42 -     62838 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           23980 42 +     46913 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          4788 42 -     28527 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      25800 42 -     64340 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          23837 42 -     63452 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5279 42 +     22490 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         2899 42 +      4141 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5705 42 -     13050 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             250942 42 -   6242583 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56674 42 +     59866 gggg-aa-a-agagta-tccc-a-agctcct---------c----------T-----------CCTC----TG----GAAATCTGA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   171866 49 -    200418 ggag-ag-a-tgtgta-tgct-a-agtttgtcacaca-g-c----------c-----------cttc----tg----gaaatCGGA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6478404 21 -  10818551 ggag-AG-A-AAAGTA-TGCT-G-AGC-----------------------------------------------------------
i Trichechus_manatus.JH594705.1                          C 0 I 16
s Tursiops_truncatus.MRVK01000835.1                       17359335 22 -  33153633 ggag-ag-g-TGTATA-TGCC-A-AGTT----------------------------------------------------------
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 14
s Uropsilus_gracilis.UroGra_scaffold_7153                   103149 25 -    105689 -----------------------------ctcatgca-a-g----------t-----------attt----tg----gaagtCTG-
i Uropsilus_gracilis.UroGra_scaffold_7153                I 16 I 3
s Ursus_maritimus.KK499267.1                                177017 38 +   5085361 --------------tc-tGTC-A-AATTCCTCATACA-G-C----------T-----------ATTC----TG----AAAGTCTGA
i Ursus_maritimus.KK499267.1                             N 0 I 6
s Varecia_rubra.k141_787544                                  20903 42 -     30710 ggag-AG-A-AGACTA-ACCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              19810 42 -    147434 ggag-AG-A-AGACTA-TCCC-A-AGTTTCT---------C----------T-----------ATTC----TG----GAAGTCTGA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74401 49 +   5488506 ggag-ag-a-catgtc-cgcc-a-agttcatcacaca-g-c----------t-----------ctgc----tg----gaagtCtga
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100423 37 -    112863 --------------TA-TG-C-A-AGTTCCTTATGCA-G-C----------T-----------ATTT----TG----AAAGTCTGA
i Vulpes_lagopus.VulLag_flattened_line_12041             N 0 I 7
s Xerus_inauris.XerIna_scaffold_2302                        161877 42 -    224448 ggag-AG-A-AGGGCA-TACC-A-AACTCCT---------T----------T-----------ATTT----TG----GCAGTATGG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24260 38 -     86975 --------------TA-TGTC-A-AGTTCCTAATGTA-G-C----------T-----------ATTC----TG----AAAGTCTGA
i Zalophus_californianus.ZalCal_flattened_line_17732     N 0 I 6
s Zapus_hudsonius.ZapHud_scaffold_95421                      12653 42 -     12806 tgaa-gg-a-agagca-tcac-a-agttcct---------c----------t-----------attc----tg----gaagtTTAA
i Zapus_hudsonius.ZapHud_scaffold_95421                  C 0 I 11
s Ziphius_cavirostris.ZipCav_flattened_line_2310576            209 49 -       394 ggag-ag-a-tgtata-tgcc-a-agtttgtc--gcacggc----------t-----------ttcc----tg----gaagtCTGA
i Ziphius_cavirostris.ZipCav_flattened_line_2310576      C 0 N 0
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542  0 +     83186 C

a score=0.000000
s hg38.chrUn_KI270755v1                                         62 23 +     36723 TCA----A-A----T-----TC-TTT---T-TC---AA-------------------GTCC------TTC
s Acinonyx_jubatus.LLWD01001279.1                           808576 25 +   1699592 -------------------------t--tt-tt----t------gtgtgtgtga-gtgtcc------TTT
i Acinonyx_jubatus.LLWD01001279.1                        I 6 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410404 15 +  29979442 -------------------------t--tt-tt----t--------------gt-gt-tc-------ttt
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 6 C 0
s Ailurus_fulgens.LNAC01001112.1                            211261  5 +    347723 -------------------------T--TT-TT-------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         I 6 I 10
s Allactaga_bullata.AllBul_scaffold_20030                    10060 12 -     61208 -----------------------------T-TT---AG-------------------GTCC------TTC
i Allactaga_bullata.AllBul_scaffold_20030                I 11 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     17692 10 +     63021 TCA-TTTC-C----T-----T-------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 9
s Allenopithecus_nigroviridis.k141_3755588                   43372 23 +     53615 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39187 23 +     44087 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GACC------TTC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68108 22 -     84148 CCA----G-G----T-----TC-TTT---T-CT----A-------------------GTCC------TTC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40331 22 -     78289 CCA----G-G----T-----TC-TTT---T-CT----A-------------------GTCC------TTC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39779 22 +     55831 CCA----G-G----T-----TC-TTT---T-CT----A-------------------GTCC------TTC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38220 22 -     64179 CCA----G-G----T-----TC-TTT---T-CT----A-------------------GTCC------TTC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           19863 22 -     24835 CCA----G-G----T-----TC-TTT---T-CT----A-------------------GTCC------TTC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             36846 22 +     45454 CCA----G-G----T-----TC-TTT---T-CT----A-------------------GTCC------TTC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42545 22 +     70886 CCA----G-A----T-----TC-TTT---T-CT----A-------------------GTCC------TTC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4672 22 +     30854 CCA----G-G----T-----TC-TTT---T-CT----A-------------------GTCC------TTC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             28811 22 +     42133 CCA----G-G----T-----TC-TTT---T-CT----A-------------------GTCC------TTC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583285 19 +   2318259 ---------A----T-----TC-T-TCAGT-G-----T-------------------GTCC------TTC
i Ammotragus_lervia.NIVO01071767.1                       I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172035 23 -    412891 CCC----C-A----T-----TC-C-C--TC-TC---CT-------------------GTCC------TTC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48368 23 -     68529 GCA----A-A----T-----TC-T-TCAGT-G-----T-------------------GTCC------TTC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46617 21 -     65372 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Aotus_azarae.k141_118258                               I 11 C 0
s Aotus_griseimembra.k141_982342                             40365 21 +     43593 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Aotus_griseimembra.k141_982342                         I 11 C 0
s Aotus_nancymaae.KZ198451.1                                668375 21 +   5030052 TCA----A-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Aotus_nancymaae.KZ198451.1                             I 11 C 0
s Aotus_trivirgatus.k141_192090                              20019 21 -     23494 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Aotus_trivirgatus.k141_192090                          I 11 C 0
s Aotus_vociferans.k141_944972                                5153 21 +      8415 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Aotus_vociferans.k141_944972                           I 11 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5584 12 -     32367 TCA----A-A----TTCTTTT-------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 10
s Artibeus_jamaicensis.ArtJam_scaffold_789629                   18 23 -       318 TCC----T-A----T-----TC-T-C--TC-TT---GT-------------------GTTC------TTC
i Artibeus_jamaicensis.ArtJam_scaffold_789629            C 0 I 62
s Ateles_geoffroyi_b.tarseq_1536                               270608 22 +  21539123 TCA----G-G----T-----TC-TTT---T-GT----A-------------------GTCT------TTC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6779 22 +     48076 TCA----G-G----T-----TC-TTT---T-GT----A-------------------GTCT------TTC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   1914 22 -     28759 TCA----G-G----T-----TC-TTT---T-GT----A-------------------GTCT------TTC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29465 22 +     44353 TCA----G-G----T-----TC-TTT---T-GT----A-------------------GTCT------TTC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              44840 22 -     71267 TCA----G-G----T-----TC-TTT---T-GT----A-------------------GTCT------TTC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                18896 22 -     33135 TCA----G-G----T-----TC-TTT---T-GT----A-------------------GTCT------TTC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2032 23 +     11645 TCA----A-A----T-----TT-CTT---T-TT---AG-------------------GTCC------TTC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2034 23 -     19611 TCA----A-A----T-----TT-CTT---T-TT---AG-------------------GTCC------TTC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955118 23 -  23207421 TCA----A-C----T-----TG-T-T--TT-TT---Gt-------------------gtct------ttc
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2326 23 -      4711 TCA----A-C----T-----TG-T-T--TT-TT---Gt-------------------gtct------ttc
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84274 19 +    124022 ---------A----T-----TC-T-TCAGG-G-----T-------------------GTCC------TTC
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 4 C 0
s Bison_bison.KN261452.1                                     19797 23 +    288883 ACA----A-A----T-----TC-T-TCAGT-G-----T-------------------GTTC------TTC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354184 23 +  48749331 ACA----A-A----T-----TC-T-TCAGT-G-----T-------------------GTTC------TTC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      752756 23 +   1948126 ACA----A-A----T-----TC-T-TCAGT-G-----T-------------------GTTC------TTC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27542891 23 -  45695690 ACA----A-A----T-----TC-T-TCAGT-G-----T-------------------GTTC------TTC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1527915 23 -   4408762 ACA----A-A----T-----TC-T-TCAGT-G-----T-------------------GTCC------TTC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   3799 22 +     28062 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GCCC------TTC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39094 22 -     91139 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GCCC------TTC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16619 22 +     95584 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GCCC------TTC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16532 22 +    119600 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GCCC------TTC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5731 21 -     13885 TCA----G-G----T-----TC--TT---T-TC----A-------------------GTCC------TTC
i Callimico_goeldii.k141_1609886                         I 11 C 0
s Callithrix_geoffroyi.k119_473390                           14416 21 +     17162 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Callithrix_geoffroyi.k119_473390                       I 11 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449372 21 + 189096842 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Callithrix_jacchus.pat_scaffold_3                      I 11 C 0
s Callithrix_kuhlii.k119_404482                              15665 21 -     18408 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Callithrix_kuhlii.k119_404482                          I 11 C 0
s Camelus_bactrianus.KN276810.1                            7629111 23 +  17673402 TCA----A-A----T-----TC-T-T--TT-TT---GT-------------------GTCC------TTC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663397 23 +   7040546 TCA----A-A----T-----TC-T-T--TT-TT---GT-------------------GTCC------TTC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207057 23 +   1652518 TCA----A-A----T-----TC-T-T--TT-TT---GT-------------------GTCC------TTC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42500833 14 +  60362399 -------------------------T--TT-TT----TG--T-G----T---------TC--------TT
i CanFam4.chr16                                          I 6 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4463 14 -     23171 -------------------------T--TT-TT----TG--T-G----T---------TC--------TT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 6 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          217824 14 +   9314153 -------------------------T--TT-TT----TG--T-G----T---------TC--------TT
i Canis_lupus_dingo.QKWQ01000480.1                       I 6 C 0
s Canis_lupus_orion.HG994398.1                            45102519 14 -  63665305 -------------------------T--TT-TT----TG--T-G----T---------TC--------TT
i Canis_lupus_orion.HG994398.1                           I 6 C 0
s Canis_lupus_familiaris.chr16                            41610945  6 +  59632846 TCA----A-A----T-------------------------------------------------------
i Canis_lupus_familiaris.chr16                           C 0 I 12
s Capra_aegagrus.CM003241.1                               27406992 19 -  46296322 ---------A----T-----TC-T-TCAGT-G-----T-------------------GTCC------TTC
i Capra_aegagrus.CM003241.1                              I 2 C 0
s Capra_hircus.CM004588.1                                 26589265 19 +  44709034 ---------A----T-----TC-T-TCAGT-G-----T-------------------GTCC------TTC
i Capra_hircus.CM004588.1                                I 2 C 0
s Carlito_syrichta.NW_007259797.1                           265157 19 +    496798 ---------G----T-----TC-TTT---T-TT---AG-------------------GTCC------Ttc
i Carlito_syrichta.NW_007259797.1                        I 4 C 0
s Castor_canadensis.CasCan_scaffold_39952                    17991 12 -     39886 -----------------------------T-TT---AT-------------------GTCC------TTC
i Castor_canadensis.CasCan_scaffold_39952                I 27 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     74813 23 -    217609 TCA----G-A----T-----TC-T-G--TT-TT---GT-------------------GTCC------TTC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_748279                           1005 21 -      1068 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Cebuella_niveiventris.k141_748279                      I 11 C 0
s Cebuella_pygmaea.k141_145798                               38836 21 +     53515 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Cebuella_pygmaea.k141_145798                           I 11 C 0
s Cebus_albifrons.Contig27                                  367064 21 -  26074798 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Cebus_albifrons.Contig27                               I 11 C 0
s Cebus_olivaceus.k141_1404781                                3953 21 -     34880 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Cebus_olivaceus.k141_1404781                           I 11 C 0
s Cebus_unicolor.k141_1654760                                63048 21 -     89041 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Cebus_unicolor.k141_1654760                            I 11 C 0
s Cephalopachus_bancanus.k141_1275952                        13429 18 -     50533 --------------T-----TC-TTT---T-TT---AG-------------------GTCC------TTT
i Cephalopachus_bancanus.k141_1275952                    I 7 C 0
s Ceratotherium_simum.JH767749.1                          15487745 23 -  27778364 TCA----A-A----T-----TC-T-T--TT-TG---GT-------------------GTCC------TTC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14578 23 +     27315 TCA----A-A----T-----TC-T-T--TT-TG---GT-------------------GTCC------TTC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136532 23 -   4669795 tca----a-a----t-----tc-ttt---c-tt---ca-------------------gtCC------TTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40273 23 +     47900 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40105 23 -     44860 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40087 23 -    148725 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23073 23 -     40656 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3081 23 +     20796 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7336 23 -     17524 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23028 23 -     34525 TCA----A-A----T-----TG-TTT---C-TT---CA-------------------GTCC------TTC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7748 23 -     25376 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360225 23 -  39242232 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266053 23 +  21565898 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27499 23 -     45857 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23290 23 -     32606 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      26939 23 +     27662 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           20989 23 +     70610 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         17854 23 +     36323 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             26454 23 -     33796 TCA----A-A----T-----CA-CTT---T-TT---AG-------------------GTCC------TTC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              648 23 -     15404 TCA----A-A----T-----CA-CTT---T-TT---AG-------------------GTCC------TTC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             4897 22 -     32913 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GTCC------TTC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15310 22 -     40346 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GTCC------TTC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15574 22 +    216457 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GTCC------TTC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15352 22 +     39636 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GTCC------TTC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16413 10 -     17061 -------------------------------TT----A-------------------GTCC------TTC
i Chiropotes_albinasus.k141_2737257                      I 22 C 0
s Chiropotes_israelita.k141_313004                           38439 22 -    112038 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GCCC------TTC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4011 22 +     34062 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GCCC------TTC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338752 23 +  18827391 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5356 23 -     44032 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300078 23 - 135778131 tca----a-a----t-----tc-ttt---c-tt---ca-------------------gtCC------TTC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404609 23 -   2368649 tca----a-a----t-----tc-ttt---c-tt---ca-------------------gtCC------TTC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373799 23 - 200372422 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4493 23 -      6605 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802696 22 +  53390261 --a----a-a----a-----tc-t-t-ttt-tt---gt-------------------gtCT------ATC
i Condylura_cristata.JH655891.1                          I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8270 23 +     10921 TCA----A-A----T-----TC-T-CC--T-TT---GT-------------------GTCC------TTT
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 38339 12 -     83289 -----------------------------T-CT---GT-------------------GTCC------TTC
i Cricetomys_gambianus.CriGam_scaffold_14425             I 11 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45237 19 -     47254 -------------------------T-TGT-GT---GT--AT-G----T--------CCCC------TTT
i Cryptoprocta_ferox.CryFer_flattened_line_24933         I 6 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    640233 11 -   1526836 -------------------------------TT---GT-------------------GTGC------ATT
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 2 C 0
s Cricetulus_griseus.LT883664.1                          213112275  3 - 224834208 TCA-------------------------------------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 5
s Daubentonia_madagascariensis.ctg71                        288471 23 +  12879189 TCA----A-A----T-----TA-TTT---C-TC---AG-------------------GTCC------TTT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623451 23 -  35494412 TCA----A-A----T-----TC-T-T--TT-TT---Gt-------------------gtct------ttc
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660171 23 -   1390856 tca----a-a----t-----tc-t-t--tt-tt---gt-------------------gttc------ttC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134566 23 -    198055 TCA----A-A----T-----TC-T-T--TT-TG---GT-------------------GTCC------TTC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               1643 24 +     19438 tca----a-a----t-----tt-t-t-tat-tt---at-------------------gtct------ttc
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237658 25 -    607251 ACA----A-A----T-----TC-T-TCAGT-GT---GT-------------------GTCC------TTC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          26161 12 +    110024 -----------------------------t-ct---gt-------------------gtcc------tgc
i Ellobius_lutescens.LOEQ01008920.1                      I 11 C 0
s Ellobius_talpinus.LOJH01026522.1                            8079 12 +     18970 -----------------------------t-ct---gt-------------------gtcc------tgc
i Ellobius_talpinus.LOJH01026522.1                       I 11 C 0
s Eptesicus_fuscus.JH977646.1                             12572709 12 +  14770903 -----------------------------C-TT---GT-------------------GTCC------TTT
i Eptesicus_fuscus.JH977646.1                            I 9 C 0
s Enhydra_lutris.KZ291758.1                               24905812  6 +  41312741 TCA----A-A----T-------------------------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 16
s Equus_asinus.JREZ01000139.1                              3037202 23 -   4378816 TCA----A-A----T-----TC-T-T--TT-CT---AT-------------------GTCC------TTC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371133 23 +  39960074 TCA----A-A----T-----TC-T-T--TT-CT---AT-------------------GTCC------TTC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              407919 23 -    498745 TCA----A-A----T-----TC-T-T--TT-CT---AT-------------------GTCC------TTC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258308 23 +  21539334 TCA----G-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           62999 23 -    133382 TCA----A-A----T-----TC-T-T--TT-TT---GT-------------------GTCT------TTC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3213 23 +      7672 TCA----A-A----T-----TC-T-T--TT-TT---GT-------------------GTCT------TTC
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11432 23 -     24895 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39144 23 -     70999 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83104 23 +    112731 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39676 23 +     68309 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50001 23 -     65740 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCT------TTC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20631 23 -     75513 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 44824 23 -     97555 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1551 23 +     30972 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39274 23 -     52037 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55675 23 -    111500 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242229 25 - 206538554 -------------------------t--tt-tg----t------gtgtgtgtga-gtgtcc------TTT
i Felis_catus.CM001381.2                                 I 6 C 0
s Felis_catus_fca126.CM031415.1                          185112005 25 - 205367284 -------------------------t--tt-tt----t------gtgtgtgtga-gtgtcc------TTT
i Felis_catus_fca126.CM031415.1                          I 6 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23377 25 -     30238 -------------------------T--TT-TG----TG--T-G----TGTGTGAGTGTCC------TTT
i Felis_nigripes.FelNig_flattened_line_31944             I 6 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14191 23 +     18121 TCA----A-A----T-----TC-TAT---T-TT---AT-------------------GTCC------TCC
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89335 23 -     95226 ACA----A-A----T-----TC-T-TCAGT-G-----T-------------------GTCC------TTC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31216 12 -     36801 -----------------------------T-TT---AT-------------------gttc------tct
i Glis_glis.GliGli_scaffold_33859                        I 25 C 0
s Gorilla_beringei.k141_3358147                                420 23 -      8343 TCA----A-A----T-----TC-TTT---T-TT---AA-------------------GTCC------TTC
i Gorilla_beringei.k141_3358147                          I 42 C 0
s Gorilla_gorilla.LT578341.1                                249914 23 - 186649187 TCA----A-A----T-----TC-TTT---T-TT---AA-------------------GTCC------TTC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   10823 12 +     11903 -----------------------------T-TT---AT-------------------GTCC------TCC
i Graphiurus_murinus.GraMur_scaffold_90206               I 24 C 0
s Hapalemur_alaotrensis.k141_330369                          11365 23 -     40692 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------ATCC------TTC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32767 23 +     49394 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57635 23 -     66874 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6512 23 -     42923 TCA----A-A----T-----TA-CGT---T-TT---AG-------------------GTCC------TTC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13508 23 -     53142 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------ATCC------TTC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26175 19 -    327341 -------------------------T-TGT-GT---GTG--T-G----T--------CTTC------CTT
i Helogale_parvula.HelPar_flattened_line_2585            I 6 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7098 19 +     48891 ---------A----T-----TC-T-TCAGT-G-----T-------------------GTCC------TTC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 2 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10633 23 +     12639 TCA----A-G----T-----GA-T-T--TT-TTTTGGT-------------------GTC---------C
i Heterohyrax_brucei.HetBruBak_scaffold_99956            I 16 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5697 23 -     36432 TCA----A-A----T-----TC-T-T--TT-TT---GT-------------------GTCC------TTC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545512 23 -   1711038 TCA----A-T----T-----TC-T-C--TT-TT---GT-------------------GTTG------TTC
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               44803 23 +     49977 TTA----A-T----T-----TC-T-C--TT-TT---GT-------------------GTTC------TTC
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    137814 23 -    630532 TCA----A-A----T-----TA-TTT---T-TT---AA-------------------GTCC------TTC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                                842 23 +     12352 TCA----A-A----T-----TA-TTT---T-TT---AA-------------------GTCC------TTC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8025 23 +     55766 TCA----A-A----T-----TA-TTT---T-TT---AA-------------------GTCC------TTC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047369 23 + 191637585 TCA----A-A----T-----TA-TTT---T-TT---AA-------------------GTCC------TTC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796701 23 +  11177569 TCA----A-A----T-----TA-TTT---T-TT---AA-------------------GTCC------TTC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2548 12 -    135385 -----------------------------T-TT---AT-------------------GTAT------TTT
i Hystrix_cristata.HysCri_scaffold_5660                  I 8 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374634 12 +   7955117 tca----a-a----ttctttt-------------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 15
s Indri_indri.k141_2435083                                     712 23 +      1070 TCA----A-A----T-----TA-CTT---T-TT---GG-------------------GTCC------TTC
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1233 23 -     16823 TCA----A-A----T-----TC-T-T--TT-TT---GT-------------------GTCT------TTC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1232485 12 +   9596543 -----------------------------T-TT---AT-------------------GTCC------TTC
i Jaculus_jaculus.JH725527.1                             I 11 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 63738 23 -     97402 TCA----A-A----T-----TC-T-T--TT-TT---GT-------------------GTCT------TTC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39160 22 +    110728 TCA----G-G----T-----TC-TTT---T-TC----A-------------------GTCC------TTC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    27526 12 -     49555 -----------------------------C-AT---GT-------------------GTCC------TTT
i Lasiurus_borealis.LasBor_scaffold_26245                I 9 I 697
s Lemur_catta.scaffold_24                                 14756157 23 +  30322482 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        4813 21 -      5330 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Leontocebus_fuscicollis.k141_3469711                   I 11 C 0
s Leontocebus_illigeri.k141_2813249                          16250 21 -     16762 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Leontocebus_illigeri.k141_2813249                      I 11 C 0
s Leontocebus_nigricollis.k141_5626589                       16549 21 -     17065 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Leontocebus_nigricollis.k141_5626589                   I 11 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6074 21 -     11567 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Leontopithecus_chrysomelas.k141_1327670                I 11 C 0
s Leontopithecus_rosalia.k141_349454                          7455 21 -     12945 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Leontopithecus_rosalia.k141_349454                     I 11 C 0
s Lepilemur_ankaranensis.k141_567626                          4811 23 +     29618 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------ATCC------TTC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4810 23 +     31569 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------ATCC------TTC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          4818 23 +     24756 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       4815 23 +     16388 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------ATCC------TTC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        808900 21 -   3914936 -------------------------t-ttt-ttgtg-t------------gtgt-gt-tc-------ttt
i Leptonychotes_weddellii.KB714746.1                     I 6 C 0
s Lipotes_vexillifer.KE559953.1                             332756 23 +    662738 TCA----A-A----T-----TC-T-T--TT-TT---GT-------------------gtct------ttc
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328488 23 -   1826925 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39075816 20 +  43346337 tga----a-a----t-----ta-t-t--tt-tt---gt-------------------gtC---------C
i Loxodonta_africana.GL010049.1                          I 16 C 0
s Lycaon_pictus.CM007581.1                                41610100  6 +  59628241 TCA----A-A----T-------------------------------------------------------
i Lycaon_pictus.CM007581.1                               C 0 I 12
s Macaca_arctoides.k141_1757516                              40769 23 -     61512 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368397 23 -  60120075 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20716 23 +     30207 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           17819 23 -     24934 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20603 23 +     30527 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31792 23 -     50087 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41530 23 +     51645 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410104 23 - 187317192 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              394987 23 +  25927173 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44119 23 -     62418 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                20806 23 +     24253 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40563 23 +     59329 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266395 23 +    668171 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17741 23 +     21031 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31473 23 +     33478 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218722 24 -    270270 TCA----A-A----T-----TT-T-TTA-T-TT---AT-------------------ATCT------TTC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        317871 23 +  24302211 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352703 23 -    752769 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669468 27 -    737560 TCA----a-a----t-----cc-t-t--ct-tt---gt--------------gt-ctgtcC------TTC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             216764 26 +    317179 TCA----A-A----T-----CC-T-T--TT-TT---GTG--T--C---T--------GTCC------T-C
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7488734 12 +  40650429 tca----a-a----ttctttt-------------------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 15
s Megaderma_lyra.MegLyr_scaffold_4542                       145778 23 +    207569 TCA----A-A----T-----TC-T-C--TC-TT---GC-------------------GTCT------TTC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 44700  9 -    140813 -----------------------------T-CT---GT-------------------GTC---------C
i Meriones_unguiculatus.MerUng_scaffold_7390             I 10 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             13826  6 -     74585 TCA----A-A----T-------------------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 14
s Mesocricetus_auratus.KB708134.1                         17426788  3 +  29670104 TTA-------------------------------------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 5
s Mesoplodon_bidens.MesBid_scaffold_6114                     79298 23 +     93471 TCA----A-A----T-----TC-T-T--TT-TT---GT-------------------GTCT------TTC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 5839 21 +     17804 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Mico_argentatus.k141_582562                            I 11 C 0
s Mico_humeralifer.k141_1180625                               6611 21 -     12984 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Mico_humeralifer.k141_1180625                          I 11 C 0
s Mico_schneideri.k141_1877700                                     14574 21 -     26561 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Mico_schneideri.k141_1877700                                 I 11 C 0
s Microcebus_murinus.CM007674.1                           74980415 23 +  93316391 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180042 23 +    200668 TCC----C-A----T-----TC-C-C--TC-TC---GT-------------------GTCC------TTC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360419 12 -   8254450 -----------------------------C-TC---AT-------------------GTCC------TTC
i Miniopterus_natalensis.LDJU01000034.1                  I 9 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39313 12 -     48117 -----------------------------C-TC---AT-------------------GTCC------TTC
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 9 C 0
s Microtus_ochrogaster.CM001695.1                         15959566 11 +  27267610 tcaaattc-t----t-----t-------------------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 12
s Miopithecus_ogouensis.k141_1534655                         17782 23 -     27822 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         3919 18 +     27589 -------------------------T-TTT-TT----TG--T-G----TGT-------TC-------TTT
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 6 C 0
s Mirza_zaza.k141_766280                                     48278 23 -     62432 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351194 23 +    437263 TCA----A-A----T-----TC-T-T--TT-TT---GT-------------------GTCT------TTC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174214 23 +    366855 TCA----C-A----T-----TC-C-C--TC-TT---GT-------------------GTCC------TTC
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22251 23 -     82753 ACA----A-A----T-----TC-T-TCAGT-G-----T-------------------GTCC------TTC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   13952 17 -     63510 -------------------------T-TGT-GT---G----T-G----T--------CTCC------TTT
i Mungos_mungo.MunMun_flattened_line_18455               I 6 C 0
s Mus_spretus.CM004101.1                                  39486311  9 + 130317789 -----------------------------T-CT---AT-------------------GTC---------C
i Mus_spretus.CM004101.1                                 I 11 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             79626 12 -     86153 -----------------------------t-tt---at-------------------gtcc------tcc
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 28 C 0
s Myotis_brandtii.KE162005.1                               9787594 12 +  10118263 -----------------------------C-TC---AT-------------------GTCC------TTT
i Myotis_brandtii.KE162005.1                             I 9 C 0
s Myotis_davidii.KB100139.1                                4377980 12 +   6019432 -----------------------------C-TT---GT-------------------GTCC------TTT
i Myotis_davidii.KB100139.1                              I 9 C 0
s Myotis_lucifugus.GL432175.1                                18224 12 -     39439 -----------------------------C-TC---GT-------------------GTCC------TTT
i Myotis_lucifugus.GL432175.1                            I 9 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1538 12 +      3929 -----------------------------C-TC---GT-------------------GTCC------TTT
i Myotis_myotis.MyoMyo_scaffold_185951                   I 9 C 0
s Murina_feae.MurFea_scaffold_17764                          33136  8 +     47283 TAA----C-A----T-----GC------------------------------------------------
i Murina_feae.MurFea_scaffold_17764                      C 0 I 13
s Mus_caroli.LT608237.1                                   35584800 11 + 120012414 TTAAATTC-C----T-----T-------------------------------------------------
i Mus_caroli.LT608237.1                                  C 0 I 9
s Mus_musculus.chr8                                       41679191 11 + 129401213 TTAAGTTC-C----T-----T-------------------------------------------------
i Mus_musculus.chr8                                      C 0 I 9
s Mus_pahari.LT608297.1                                   58212815 11 +  89631738 TTAAATTT-C----T-----T-------------------------------------------------
i Mus_pahari.LT608297.1                                  C 0 I 9
s Mustela_putorius.JH418006.1                             14342826  6 +  14710649 TCa----a-a----t-------------------------------------------------------
i Mustela_putorius.JH418006.1                            C 0 I 15
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108656 20 +    130748 TCA----A-G----T-----TA-T-T--TT-TT---GT-------------------GTC---------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 3
s Nasalis_larvatus.k141_1350636                              24147 23 +     34575 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464317 18 -  31847680 -------------------------t-ttt-tt----t------------gtgt-gt-tc-------ttt
i Neomonachus_schauinslandi.NINY01007730.1               I 6 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225367 23 -   7148211 TCA----A-A----T-----TC-T-T--TT-TT---Gt-------------------gtct------ttc
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   120170 23 -    149072 GCA----C-A----T-----TC-T-C--TC-TT---GT-------------------GTCC------TTC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49099 23 -    132029 TCA----A-A----T-----TA-TTT---T-TT---AA-------------------GTCC------TTC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5195 23 -     16345 TCA----A-A----T-----TA-TTT---T-TT---AA-------------------GTCC------TTC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11078 23 +     22201 TCA----A-A----T-----TA-TTT---T-TT---AA-------------------GTCC------TTC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409415 23 -  22158432 TCA----A-A----T-----TA-TTT---T-TT---AA-------------------GTCC------TTC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21478 23 -     54323 TCA----A-A----T-----TA-TTT---T-TT---AA-------------------GTCC------TTC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193717 14 +   9404916 -------------------------T--TT-TT----TG--T-G----T---------TC--------TT
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 6 C 0
s Ochotona_princeps.JH802162.1                             2566574 10 -   3988456 TTC----A-A----T-----TG-T-A--------------------------------------------
i Ochotona_princeps.JH802162.1                           I 62 I 8
s Odobenus_rosmarus.KB229312.1                             1447089 17 +   2017862 -------------------------t--tt-tt----t------------gtgt-gt-tc-------ttt
i Odobenus_rosmarus.KB229312.1                           I 6 C 0
s Odocoileus_virginianus.KZ100018.1                         434228 25 -    630418 ACA----A-A----T-----TC-T-TCAGT-GT---GT-------------------GTCC------TTC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12218 23 +    150152 ACA----A-A----T-----TC-T-TCAGT-G-----T-------------------GTCC------TTC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   103162 12 +    107918 -----------------------------T-CT---AT-------------------GTCC------TTC
i Onychomys_torridus.OnyTor_scaffold_2487                I 11 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    85821 11 -    140218 TCAATTTC-T----T-----T-------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 12
s Orcinus_orca.KB316932.1                                  8094632 23 +  10937097 TCA----A-A----T-----TC-T-T--TT-TT---Gt-------------------gtct------ttc
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        34782 14 +    559221 -------------------------T--TT-TT----TG--T-G----T---------TC--------TT
i Otocyon_megalotis.JAEUCK010005147.1                    I 6 C 0
s Ovis_aries.CM001607.2                                   26402216 19 -  44047080 ---------A----T-----TC-T-TCAGT-G-----T-------------------GTCC------TTC
i Ovis_aries.CM001607.2                                  I 2 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       2735 19 +     17875 ---------A----T-----TC-T-TCAGT-G-----T-------------------GTCC------TTC
i Ovis_canadensis.OviCan_scaffold_67953                  I 2 C 0
s Pan_troglodytes.CM009242.2                               1467302 23 - 189151597 TCA----A-A----T-----TC-TTT---T-TT---AA-------------------GTCC------TTC
i Pan_troglodytes.CM009242.2                             I 42 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   19953 25 -    230217 -------------------------T--TT-TT----TG--T-G----TGTGTGAGTGTCC------TTT
i Panthera_onca.PanOnc_flattened_line_3271               I 6 C 0
s Panthera_pardus.KV860321.1                              18457275 25 -  18783137 -------------------------t--tt-tt----t------gtgtgtatga-gtGTCC------TTT
i Panthera_pardus.KV860321.1                             I 6 C 0
s Panthera_tigris.KE722367.1                               3968012 25 +   8748460 -------------------------t--tt-tt----t------gtgtgtgtga-gtgtcc------TTT
i Panthera_tigris.KE722367.1                             I 6 C 0
s Pantholops_hodgsonii.KE114653.1                          1613664 19 +   2937107 ---------A----T-----TT-T-TCAGT-G-----T-------------------GTCC------TTC
i Pantholops_hodgsonii.KE114653.1                        I 2 C 0
s Papio_anubis.CM001495.2                                   238715 23 - 183742232 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5182 23 +     21308 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286219 23 -  20919399 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  17835 23 -     27687 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    10971 23 +     16796 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17781 23 -     23640 TCA----A-A----T-----TC-TTT---C-TT---CA-------------------GTCC------TTC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10876 18 +     78924 -------------------------T--TT-TT---GTG--T-G----T--------GTCC------TTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 6 C 0
s Peromyscus_maniculatus.KI615324.1                         242826 12 +  18517816 -----------------------------T-CT---GT-------------------GTCC------TTC
i Peromyscus_maniculatus.KI615324.1                      I 11 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10495 23 -     15039 TCA----A-A----T-----TC-T-T--TT-TT---GT-------------------GTCT------TTC
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4601 23 +      7560 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60308 23 -     63152 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            42907 23 +     45295 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     586 23 +      5735 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            44888 12 +     46691 -----------------------------C-TC---AT-------------------GTCC------TTT
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        I 9 C 0
s Pithecia_albicans.k141_1239476                             60788 22 +    207309 TCA----G-G----T-----TC-TTT---C-TT----A-------------------GTCC------TTC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          1908 22 -     25401 TCA----G-G----T-----TC-TTT---C-TT----A-------------------GTCC------TTC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27623 22 +     58159 TCA----G-G----T-----TC-TTT---C-TT----A-------------------GTCC------TTC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         27899 22 +     63561 TCA----G-G----T-----TC-TTT---C-TT----A-------------------GTCC------TTC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27662 22 +     51148 TCA----G-G----T-----TC-TTT---C-TT----A-------------------GTCC------TTC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552657 22 -   4542175 TCA----G-G----T-----TC-TTT---C-TT----A-------------------GTCC------TTC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27646 22 +     51125 TCA----G-G----T-----TC-TTT---C-TT----A-------------------GTCC------TTC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2579 23 -      8168 TCA----A-A----T-----TC-T-T--TT-TT---AT-------------------GTCT------TTC
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4081 22 +     39866 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GTCC------TTC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_89578                           3865 22 -      4004 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GTCC------TTC
i Plecturocebus_brunneus.k141_89578                      C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38570 22 -     87950 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GTCC------TTC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     38963 22 -     88961 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GTCC------TTC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3663 22 -     39403 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GTCC------TTC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38616 22 +     87928 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GTCC------TTC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3659 22 -     60166 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GTCC------TTC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10595 22 -     67232 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GTCC------TTC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38512 22 -     90634 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GTCC------TTC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          39979 22 +     89403 TCA----G-G----T-----TC-TTT---T-TT----A-------------------GTCC------TTC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   172919 23 - 189387572 TCA----A-A----T-----TC-TTT---T-TT---AA-------------------GTCC------TTC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      187917 23 -   9816681 TCA----A-A----T-----TC-TTT---T-TT---AA-------------------GTCC------TTC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23087 23 +     69807 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40282 23 -     80239 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7781 24 +     14086 TCA----A-G----T-----GA-T-T--TTTTTTTGGT-------------------GTC---------C
i Procavia_capensis.ProCapCap_scaffold_121686            I 16 C 0
s Prolemur_simus.MPIZ01000396.1                            1979315 23 +   4620579 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1561897 23 -   2598838 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          78990 23 -     79582 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              135 23 -     11706 TCA----A-A----T-----GA-CTT---T-TT---AG-------------------GTCC------TTC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            3870 23 -     30655 TCA----A-A----T-----GA-CTT---T-TT---AG-------------------GTCC------TTC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30199 23 +     46564 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90490 23 -     98465 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4112 23 +     35169 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            32184 10 +     52041 TCA-TTTC-T----G-----T-------------------------------------------------
i Psammomys_obesus.NESX01036366.1                        C 0 I 9
s Pteronotus_parnellii.KE847780.1                            47291 23 -     66298 TCA----C-A----T-----TC-T-C--TC-TT---GT-------------------GTCC------TTC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          3964  6 -     10349 TCA----A-A----T-------------------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 I 16
s Pteropus_alecto.KB030862.1                               5836187 24 -  28871421 tca----a-a----t-----tt-t-t-tat-tt---at-------------------gtct------ttc
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3532763 24 -   4952924 tca----a-a----t-----tt-t-t-tat-tt---at-------------------gtct------ttc
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18094837 25 +  38429054 -------------------------t--tt-tg----t------gtgtgtgtga-gtgtcc------TTT
i Puma_concolor.QAVW01001104.1                           I 6 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51193 17 +     55069 -----------------------T-TCAGT-GT---GT-------------------GTCC------TTC
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 8 C 0
s Rattus_norvegicus.chr16                                 37011529 11 -  90668790 TCCAATTT-C----T-----T-------------------------------------------------
i Rattus_norvegicus.chr16                                C 0 I 9
s Rhinolophus_sinicus.LVEH01000134.1                       2908288 17 +   3329780 --------------------TC-T-C--TT-TT---GT-------------------GTCC------TTC
i Rhinolophus_sinicus.LVEH01000134.1                     I 5 C 0
s Rhinopithecus_bieti.k119_221883                            24305 23 +     27361 TCA----G-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117664 23 + 195417433 TCA----G-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             231913 23 -   7961872 TCA----G-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70239 23 -    116970 TCA----A-A----T-----T--T-TTA-C-TC---AT-------------------GCCT------TTC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1125626                              16305 21 +     16959 TCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Saguinus_bicolor.k141_1125626                          I 11 C 0
s Saguinus_geoffroyi.k141_2310874                            38155 21 +     72255 CCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Saguinus_geoffroyi.k141_2310874                        I 11 C 0
s Saguinus_imperator.k141_1164420                            10796 21 +     11432 CCA----G-G----T-----TC--TT---T-TT----G-------------------GTCC------TTC
i Saguinus_imperator.k141_1164420                        I 11 C 0
s Saguinus_inustus.k141_2555509                              16171 21 -     16755 CCA----G-G----T-----TC--TT---T-TT----G-------------------GTCC------TTC
i Saguinus_inustus.k141_2555509                          I 11 C 0
s Saguinus_labiatus.k141_3072636                             14741 21 -     15289 CCA----G-G----T-----TC--TT---T-TT----G-------------------GTCC------TTC
i Saguinus_labiatus.k141_3072636                         I 11 C 0
s Saguinus_midas.LG03                                       386737 21 - 209938924 TCA----G-G----T-----TC--CT---T-TT----A-------------------GTCC------TTC
i Saguinus_midas.LG03                                    I 11 C 0
s Saguinus_mystax.k141_2237965                                7602 21 +     22212 CCA----G-G----T-----TC--TT---T-TT----G-------------------GTCC------TTC
i Saguinus_mystax.k141_2237965                           I 11 C 0
s Saguinus_oedipus.k141_1808308                              16099 21 +     39756 CCA----G-G----T-----TC--TT---T-TT----A-------------------GTCC------TTC
i Saguinus_oedipus.k141_1808308                          I 11 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        5807 19 +     16473 ---------A----T-----TC-T-TCAGT-G-----T-------------------GTCC------TTC
i Saiga_tatarica.SaiTat_scaffold_39512                   I 4 C 0
s Sapajus_apella.ctg103                                     234288 21 +   5703754 TCA----G-G----T-----TC--AT---T-TT----A-------------------GTCC------TTC
i Sapajus_apella.ctg103                                  I 11 C 0
s Sapajus_macrocephalus.k141_796559                           3878 21 +     21866 TCA----G-G----T-----TC--AT---T-TT----A-------------------GTCC------TTC
i Sapajus_macrocephalus.k141_796559                      I 11 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111754 21 +    313613 --A----A-A----T-----TC-T-T--TC-TT---GT-------------------GTCC------ATC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 C 0
s Semnopithecus_entellus.k141_158471                         20795 23 +     27374 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24310 23 +     58920 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           10807 23 -     45317 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18464 23 -     42441 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21146 23 -     29113 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24218 23 -     48123 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    44113 12 +     77746 -----------------------------T-CT---GG-------------------GTCC------TTC
i Sigmodon_hispidus.SigHis_scaffold_20193                I 11 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1853944 23 -   1910179 --a----a-g----t-----tc-t-ttATT-TT---TT-------------------GTCC------TTC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              1831 29 -     97271 -------------------------T--TG-TC----TGGATAGCAAATGTTTT-GT-TC-------TTT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 6 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120548 17 +    196729 -------------------------T-TGT-GT---G----T-G----T--------CTCC------TTT
i Suricata_suricatta.SurSur_flattened_line_6629          I 6 C 0
s Spermophilus_dauricus.KZ294078.1                         1854948 12 +   3870691 tca----a-a----ttctttt-------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 15
s Sus_scrofa.CM000828.4                                    6639281 23 +  69701581 tca----g-a----t-----tc-t-t--tt-tt---gt-------------------gtCC------TTC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386391 23 +   1523678 TCA----A-A----T-----TA-TTT---T-TT---AA-------------------GTCC------TTC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                10883 22 +     22964 TAA----C-A----T-----TC-T-C--TC--T---GT-------------------GTCC------TTC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                23613 20 -     25844 TCA----A-G----T-----TA-T-T--TT-TT---GT-------------------GTC---------T
i Tamandua_tetradactyla.TamTet_scaffold_67439            C 0 I 3
s Tapirus_indicus.TapInd_scaffold_7432                      186994 23 +    199430 TCA----A-A----T-----TC-T-T--TT-TT---GT-------------------GTCC------CTC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    100953 23 -    539355 TCA----A-A----T-----TC-T-T--TT-TT---GT-------------------GTCC------TTC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                2757 24 +      6850 GCG--T-G-T----T-----TT-TTT---T-TT---AG-------------------GTCC------TTC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                2839 24 +     20590 GCG--T-G-G----T-----TT-TTT---T-TT---AG-------------------GTCC------TTC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348700 23 - 186847797 tca----a-a----t-----tc-ttt---c-tt---ca-------------------gtCC------TTC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475080 23 -    610378 CCC----T-G----T-----TC-T-C--TC-TC---GC-------------------GTCC------TTC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16359 23 +     26378 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29040 23 -     78344 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15680 23 +     25722 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      23903 23 -     62838 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24022 23 +     46913 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          4830 23 -     28527 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTAC------TTC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      25842 23 -     64340 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          23879 23 -     63452 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5321 23 +     22490 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         2941 23 +      4141 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5747 23 -     13050 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             250984 23 -   6242583 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56716 23 +     59866 TCA----A-A----T-----CC-TTT---C-TT---CA-------------------GTCC------TTC
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   171915 22 -    200418 TCA----A-A----T-----TC-T-T---T-GT---GT-------------------GTTC------TTC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6478441 20 -  10818551 TCA----A-G----T-----TA-T-T--TT-TT---GT-------------------GTT---------C
i Trichechus_manatus.JH594705.1                          I 16 C 0
s Tupaia_chinensis.KB320699.1                              1824921 25 -   4065304 -------A-T----T-----TG-A-T---T-TT---AT-------------------TCCCCCCAGATTC
i Tupaia_chinensis.KB320699.1                            N 0 I 55
s Tursiops_truncatus.MRVK01000835.1                       17359371 23 -  33153633 TCA----A-A----T-----TC-T-T--TT-TT---Gt-------------------gtct------ttc
i Tursiops_truncatus.MRVK01000835.1                      I 14 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103177 21 -    105689 --A----A-A----T-----TC-T-T--TT-TC---AT-------------------GTCC------TTC
i Uropsilus_gracilis.UroGra_scaffold_7153                I 3 C 0
s Ursus_maritimus.KK499267.1                                177061 15 +   5085361 -------------------------t--tt-tt----t--------------gt-gt-tc-------ttt
i Ursus_maritimus.KK499267.1                             I 6 C 0
s Varecia_rubra.k141_787544                                  20945 23 -     30710 TCA----A-A----T-----TA-CTT---T-TT---AG-------------------GTCC------TTC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              19852 24 -    147434 TCA----A-A----T-----TAACTT---T-TT---AG-------------------GTCC------TTC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74450 23 +   5488506 tca----a-a----t-----ta-t-t--tt-tt---gt-------------------gtcc------ttc
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100467 14 -    112863 -------------------------T--TT-TT----TG--T-G----T---------TC--------TT
i Vulpes_lagopus.VulLag_flattened_line_12041             I 7 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24304 17 -     86975 -------------------------T--TT-TT----TG--T-G----TGT-------TC-------TTT
i Zalophus_californianus.ZalCal_flattened_line_17732     I 6 C 0
s Zapus_hudsonius.ZapHud_scaffold_95421                      12706 12 -     12806 -----------------------------T-TC---AT-------------------GCCC------TTC
i Zapus_hudsonius.ZapHud_scaffold_95421                  I 11 C 0
s Xerus_inauris.XerIna_scaffold_2302                        161919 12 -    224448 TCA----A-A----TTCTTTT-------------------------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 16
s Ziphius_cavirostris.ZipCav_flattened_line_2660542             22 23 +       358 TCA----A-A----T-----TC-T-T--TT-TT---GT-------------------GTCT------TTC
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      N 0 C 0
e Oryctolagus_cuniculus.CM000791.1                       107098823  0 - 174332312 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542  0 +     83186 C

a score=0.000000
s hg38.chrUn_KI270755v1                                         85 3 +     36723 A--GT
s Acinonyx_jubatus.LLWD01001279.1                           808601 3 +   1699592 T--GC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     17711 3 +     63021 A--GT
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 9 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410419 3 +  29979442 a--gc
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            211276 3 +    347723 A--GC
i Ailurus_fulgens.LNAC01001112.1                         I 10 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    10072 3 -     61208 A--GT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43395 3 +     53615 A--GT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39210 3 +     44087 C--GT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68130 3 -     84148 A--GT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40353 3 -     78289 A--GT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39801 3 +     55831 A--GT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38242 3 -     64179 A--GT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           19885 3 -     24835 A--GT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             36868 3 +     45454 A--GT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42567 3 +     70886 A--GT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4694 3 +     30854 A--GT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             28833 3 +     42133 A--GT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583304 3 +   2318259 A--TC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172058 3 -    412891 A--GC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48391 3 -     68529 A--GA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46638 3 -     65372 A--GT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40386 3 +     43593 A--GT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668396 3 +   5030052 A--GT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20040 3 -     23494 A--GT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5174 3 +      8415 A--GT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5606 2 -     32367 A--G-
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 10 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_859459                   19 3 -       293 A--GC
i Artibeus_jamaicensis.ArtJam_scaffold_859459            n 62 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270630 3 +  21539123 A--GT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6801 3 +     48076 A--GT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   1936 3 -     28759 C--GT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29487 3 +     44353 A--GT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              44862 3 -     71267 A--GT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                18918 3 -     33135 A--GT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2055 3 +     11645 A--GT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2057 3 -     19611 A--GT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955141 3 -  23207421 a--gc
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2349 3 -      4711 a--gc
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84293 3 +    124022 A--TC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     19820 3 +    288883 A--GC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354207 3 +  48749331 A--GC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      752779 3 +   1948126 A--GC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27542914 3 -  45695690 A--GC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1527938 3 -   4408762 A--GC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   3821 3 +     28062 A--GT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39116 3 -     91139 A--GT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16641 3 +     95584 A--GT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16554 3 +    119600 A--GT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5752 3 -     13885 A--GG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14437 3 +     17162 A--GT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449393 3 + 189096842 A--GT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15686 3 -     18408 A--GT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629134 3 +  17673402 A--GC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663420 3 +   7040546 A--GC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207080 3 +   1652518 A--GC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42500847 3 +  60362399 A--TC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4477 3 -     23171 A--TC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          217838 3 +   9314153 A--TC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41610963 3 +  59632846 a--tc
i Canis_lupus_familiaris.chr16                           I 12 C 0
s Canis_lupus_orion.HG994398.1                            45102533 3 -  63665305 A--TC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407011 3 -  46296322 A--TC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589284 3 +  44709034 A--TC
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265176 3 +    496798 a--ga
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    18003 3 -     39886 A--GT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     74836 3 -    217609 A--GC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_748279                           1026 3 -      1068 A--GT
i Cebuella_niveiventris.k141_748279                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               38857 3 +     53515 A--GT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367085 3 -  26074798 A--GT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                3974 3 -     34880 A--GT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63069 3 -     89041 A--GT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13447 3 -     50533 A--GA
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15487768 3 -  27778364 A--GC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14601 3 +     27315 A--GC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136555 3 -   4669795 A--GT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40296 3 +     47900 A--GT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40128 3 -     44860 A--GT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40110 3 -    148725 A--GT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23096 3 -     40656 A--GT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3104 3 +     20796 A--GT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7359 3 -     17524 A--GT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23051 3 -     34525 A--GT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7771 3 -     25376 A--GT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360248 3 -  39242232 A--GT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266076 3 +  21565898 A--GT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27522 3 -     45857 A--GT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23313 3 -     32606 A--GT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      26962 3 +     27662 A--GT
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21012 3 +     70610 A--GT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         17877 3 +     36323 A--GT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             26477 3 -     33796 A--GT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              671 3 -     15404 A--GT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             4919 3 -     32913 A--GT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15332 3 -     40346 A--GT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15596 3 +    216457 A--GT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15374 3 +     39636 A--GT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16423 3 -     17061 A--GT
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38461 3 -    112038 A--GT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4033 3 +     34062 A--GT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338775 3 +  18827391 A--GT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5379 3 -     44032 A--GT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300101 3 - 135778131 A--GT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404632 3 -   2368649 A--GT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373822 3 - 200372422 A--GT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4516 3 -      6605 A--GT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802718 3 +  53390261 A--GC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8293 3 +     10921 A--GC
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 38351 3 -     83289 A--GT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45256 3 -     47254 A--GC
i Cryptoprocta_ferox.CryFer_flattened_line_24933         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    640244 3 -   1526836 A--GT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288494 3 +  12879189 A--GT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623474 3 -  35494412 a--gc
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660194 3 -   1390856 A--GC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134589 3 -    198055 A--GC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               1667 3 +     19438 a--gC
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237683 3 -    607251 A--GC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          26173 3 +    110024 a--at
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                            8091 3 +     18970 a--at
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24905834 3 +  41312741 A--GC
i Enhydra_lutris.KZ291758.1                              I 16 C 0
s Eptesicus_fuscus.JH977646.1                             12572721 3 +  14770903 G--GC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037225 3 -   4378816 A--GC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371156 3 +  39960074 A--GC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              407942 3 -    498745 A--GC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258331 3 +  21539334 C--GT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63022 3 -    133382 A--GC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3236 3 +      7672 A--GC
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11455 3 -     24895 A--GT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39167 3 -     70999 A--GT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83127 3 +    112731 A--GT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39699 3 +     68309 A--GT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50024 3 -     65740 A--GT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20654 3 -     75513 A--GT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 44847 3 -     97555 A--GT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1574 3 +     30972 A--GT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39297 3 -     52037 A--GT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55698 3 -    111500 A--GT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242254 3 - 206538554 T--GC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112030 3 - 205367284 T--GC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23402 3 -     30238 T--GC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14214 3 +     18121 A--GT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89358 3 -     95226 A--GC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31228 3 -     36801 g--gt
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                                443 3 -      8343 A--GT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                249937 3 - 186649187 A--GT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   10835 3 +     11903 A--GT
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11388 3 -     40692 A--GT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32790 3 +     49394 A--GT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57658 3 -     66874 A--GT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6535 3 -     42923 A--GT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13531 3 -     53142 A--GT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26194 3 -    327341 A--GC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7117 3 +     48891 A--TC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10656 3 +     12639 A--TT
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5720 3 -     36432 A--GC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545535 3 -   1711038 A--AC
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               44826 3 +     49977 A--AC
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    137837 3 -    630532 A--GT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                                865 3 +     12352 A--GT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8048 3 +     55766 A--GT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047392 3 + 191637585 A--GT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796724 3 +  11177569 A--GT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2560 3 -    135385 A--GT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374661 2 +   7955117 a--g-
i Ictidomys_tridecemlineatus.JH393364.1                  I 15 C 0
s Indri_indri.k141_2435083                                     735 3 +      1070 A--GT
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1256 3 -     16823 A--GC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1232497 3 +   9596543 A--AA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 63761 3 -     97402 A--GC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39182 3 +    110728 A--GT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58282 3 -     65777 G--GC
i Lasiurus_borealis.LasBor_scaffold_16567                I 68 C 0
s Lemur_catta.scaffold_24                                 14756180 3 +  30322482 A--GT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        4834 3 -      5330 A--GT
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16271 3 -     16762 A--GT
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16570 3 -     17065 A--GT
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6095 3 -     11567 A--GT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7476 3 -     12945 A--GT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          4834 3 +     29618 A--GT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4833 3 +     31569 A--GT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          4841 3 +     24756 A--GT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       4838 3 +     16388 A--GT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        808921 3 -   3914936 a--gc
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             332779 3 +    662738 a--ga
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328511 3 -   1826925 A--GT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39075836 3 +  43346337 A--TT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41610118 3 +  59628241 a--tc
i Lycaon_pictus.CM007581.1                               I 12 C 0
s Macaca_arctoides.k141_1757516                              40792 3 -     61512 A--GT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368420 3 -  60120075 A--GT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20739 3 +     30207 A--GT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           17842 3 -     24934 A--GT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20626 3 +     30527 A--GT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31815 3 -     50087 A--GT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41553 3 +     51645 A--GT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410127 3 - 187317192 A--GT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395010 3 +  25927173 A--GT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44142 3 -     62418 A--GT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                20829 3 +     24253 A--GT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40586 3 +     59329 A--GT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266418 3 +    668171 A--GT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17764 3 +     21031 A--GT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31496 3 +     33478 A--GT
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218746 3 -    270270 A--GC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        317894 3 +  24302211 A--GT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352726 3 -    752769 A--GT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669495 5 -    737560 AGCGC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             216790 3 +    317179 A--GC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7488761 2 +  40650429 a--g-
i Marmota_marmota.CZRN01000018.1                         I 15 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       145801 3 +    207569 A--GC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             13846 3 -     74585 A--GC
i Mellivora_capensis.MelCap_flattened_line_19308         I 14 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 44709 3 -    140813 A--GT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79321 3 +     93471 A--GC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 5860 3 +     17804 A--GT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6632 3 -     12984 A--GT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14595 3 -     26561 A--GT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980438 3 +  93316391 a--gt
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180065 3 +    200668 A--GC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15959589 3 +  27267610 a--at
i Microtus_ochrogaster.CM001695.1                        I 12 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360431 3 -   8254450 A--GC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39325 3 -     48117 A--GC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         17805 3 -     27822 A--GT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         3937 3 +     27589 A--GC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     48301 3 -     62432 A--GT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351217 3 +    437263 A--GC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174237 3 +    366855 A--GC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22274 3 -     82753 A--GC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   13969 3 -     63510 A--GC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          33157 3 +     47283 G--GC
i Murina_feae.MurFea_scaffold_17764                      I 13 C 0
s Mus_caroli.LT608237.1                                   35584820 3 + 120012414 a--gt
i Mus_caroli.LT608237.1                                  I 9 C 0
s Mus_musculus.chr8                                       41679211 3 + 129401213 A--Gc
i Mus_musculus.chr8                                      I 9 C 0
s Mus_pahari.LT608297.1                                   58212835 3 +  89631738 a--gt
i Mus_pahari.LT608297.1                                  I 9 C 0
s Mus_spretus.CM004101.1                                  39486320 3 + 130317789 a--gt
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             79638 3 -     86153 a--gg
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 241
s Mustela_putorius.JH418006.1                             14342847 3 +  14710649 a--gc
i Mustela_putorius.JH418006.1                            I 15 C 0
s Myotis_brandtii.KE162005.1                               9787606 3 +  10118263 G--GC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4377992 3 +   6019432 G--GC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18236 3 -     39439 G--GC
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1550 3 +      3929 G--GC
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108679 3 +    130748 A--GT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 3 C 0
s Nasalis_larvatus.k141_1350636                              24170 3 +     34575 A--GT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464335 3 -  31847680 a--gc
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225390 3 -   7148211 a--gc
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   120193 3 -    149072 G--GC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49122 3 -    132029 A--GT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5218 3 -     16345 A--GT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11101 3 +     22201 A--GT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409438 3 -  22158432 A--GT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21501 3 -     54323 A--GT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193731 3 +   9404916 A--TC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2566592 3 -   3988456 A--AT
i Ochotona_princeps.JH802162.1                           I 8 I 3
s Odobenus_rosmarus.KB229312.1                             1447106 3 +   2017862 a--gc
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434253 3 -    630418 A--gc
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12241 3 +    150152 A--GC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    85844 3 -    140218 A--AT
i Ondatra_zibethicus.OndZib_scaffold_7387                I 12 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   103174 3 +    107918 A--GC
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orcinus_orca.KB316932.1                                  8094655 3 +  10937097 a--gc
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        34796 3 +    559221 A--TC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26402235 3 -  44047080 A--TC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       2754 3 +     17875 A--TC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467325 3 - 189151597 A--GT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   19978 3 -    230217 T--GC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18457300 3 -  18783137 T--GC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968037 3 +   8748460 T--GC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1613683 3 +   2937107 A--TC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   238738 3 - 183742232 A--GT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5205 3 +     21308 A--GT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286242 3 -  20919399 A--GT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  17858 3 -     27687 A--GT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    10994 3 +     16796 A--GT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17804 3 -     23640 A--GT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10894 3 +     78924 A--GC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         242838 3 +  18517816 A--GT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10518 3 -     15039 A--GC
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4624 3 +      7560 A--GT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60331 3 -     63152 A--GT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            42930 3 +     45295 A--GT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     609 3 +      5735 A--GT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            44900 3 +     46691 G--GC
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             60810 3 +    207309 A--GT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          1930 3 -     25401 A--GT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27645 3 +     58159 A--GT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         27921 3 +     63561 A--GT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27684 3 +     51148 A--GT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552679 3 -   4542175 A--GT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27668 3 +     51125 A--GT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2602 3 -      8168 A--GC
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4103 3 +     39866 A--GT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_89578                           3887 3 -      4004 A--GT
i Plecturocebus_brunneus.k141_89578                      C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38592 3 -     87950 A--GT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     38985 3 -     88961 A--GT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3685 3 -     39403 A--GT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38638 3 +     87928 A--GT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3681 3 -     60166 A--GT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10617 3 -     67232 A--GT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38534 3 -     90634 A--GT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40001 3 +     89403 A--GT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   172942 3 - 189387572 A--GT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      187940 3 -   9816681 A--GT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23110 3 +     69807 A--GT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40305 3 -     80239 A--GT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7805 3 +     14086 A--TT
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979338 3 +   4620579 A--GT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1561920 3 -   2598838 A--GT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79013 3 -     79582 A--GT
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              158 3 -     11706 A--GT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            3893 3 -     30655 A--GT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30222 3 +     46564 A--GT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90513 3 -     98465 A--GT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4135 3 +     35169 A--GT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            32203 3 +     52041 C--AT
i Psammomys_obesus.NESX01036366.1                        I 9 C 0
s Pteronotus_parnellii.KE847780.1                            47314 3 -     66298 A--GC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          3986 3 -     10349 A--GC
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 16 C 0
s Pteropus_alecto.KB030862.1                               5836211 3 -  28871421 a--gc
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3532787 3 -   4952924 a--tc
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18094862 3 +  38429054 T--GC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51210 3 +     55069 A--GC
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37011549 3 -  90668790 A--gt
i Rattus_norvegicus.chr16                                I 9 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2908305 3 +   3329780 A--GC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24328 3 +     27361 A--GT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117687 3 + 195417433 A--GT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             231936 3 -   7961872 A--GT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70262 3 -    116970 G--GC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1125626                              16326 3 +     16959 A--GT
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38176 3 +     72255 A--GT
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            10817 3 +     11432 A--GT
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16192 3 -     16755 A--GT
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14762 3 -     15289 G--GT
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386758 3 - 209938924 A--GT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7623 3 +     22212 A--GT
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16120 3 +     39756 A--GT
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        5826 3 +     16473 A--GC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234309 3 +   5703754 A--GT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           3899 3 +     21866 A--GT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111775 3 +    313613 A--GC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         20818 3 +     27374 A--GT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24333 3 +     58920 A--GT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           10830 3 -     45317 A--GT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18487 3 -     42441 A--GT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21169 3 -     29113 A--GT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24241 3 -     48123 A--GT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    44125 3 +     77746 A--GT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1853967 3 -   1910179 A--GC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1854975 2 +   3870691 a--g-
i Spermophilus_dauricus.KZ294078.1                       I 15 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              1860 3 -     97271 A--GC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120565 3 +    196729 A--GC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6639304 3 +  69701581 A--GC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386414 3 +   1523678 A--GT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                10905 3 +     22964 A--GC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                23636 3 -     25844 A--GT
i Tamandua_tetradactyla.TamTet_scaffold_67439            I 3 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187017 3 +    199430 A--GC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    100976 3 -    539355 A--GC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                2781 3 +      6850 A--GA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                2863 3 +     20590 A--GA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348723 3 - 186847797 A--GT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475103 3 -    610378 A--GC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16382 3 +     26378 A--GT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29063 3 -     78344 A--GT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15703 3 +     25722 A--GT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      23926 3 -     62838 A--GT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24045 3 +     46913 A--GT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          4853 3 -     28527 A--GT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      25865 3 -     64340 A--GT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          23902 3 -     63452 A--GT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5344 3 +     22490 A--GT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         2964 3 +      4141 A--GT
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5770 3 -     13050 A--GT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251007 3 -   6242583 A--GT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56739 3 +     59866 A--GT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   171937 3 -    200418 A--GC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6478461 3 -  10818551 A--TT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1825001 3 -   4065304 t--gt
i Tupaia_chinensis.KB320699.1                            I 55 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2402 3 -     70247 T--GT
i Tupaia_tana.TupTan_flattened_line_394                  N 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359394 3 -  33153633 a--gc
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103198 3 -    105689 A--GC
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177076 3 +   5085361 a--gC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  20968 3 -     30710 A--GT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              19876 3 -    147434 A--GT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74473 3 +   5488506 a--gc
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100481 3 -    112863 A--TC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        161947 3 -    224448 A--GT
i Xerus_inauris.XerIna_scaffold_2302                     I 16 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24321 3 -     86975 A--GC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_95421                      12718 3 -     12806 A--AT
i Zapus_hudsonius.ZapHud_scaffold_95421                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2660542             45 3 +       358 A--GC
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      C 0 C 0
e Oryctolagus_cuniculus.CM000791.1                       107098823 0 - 174332312 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542 0 +     83186 C
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I

a score=0.000000
s hg38.chrUn_KI270755v1                                         88 13 +     36723 AATG-G--TT-AATTAT
s Acinonyx_jubatus.LLWD01001279.1                           808604 11 +   1699592 aatg-t--tttaat---
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 61
s Acomys_cahirinus.AcoCah_scaffold_21377                     17714  9 +     63021 AGTG-T--TTTA-----
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410422 11 +  29979442 AATG-T--TTTAAT---
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 57
s Ailurus_fulgens.LNAC01001112.1                            211279 11 +    347723 AATG-T--TTTAAT---
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 60
s Allactaga_bullata.AllBul_scaffold_20030                    10075  9 -     61208 AGTA-C--TTTA-----
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43398 13 +     53615 AATG-G--TT-AATTAT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39213 13 +     44087 AATG-G--TT-AATTAT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68133 13 -     84148 AATG-A--TT-AATTAT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40356 13 -     78289 AATG-A--TT-AATTAT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39804 13 +     55831 AATG-A--TT-AATTAT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38245 13 -     64179 AATG-A--TT-AATTAT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           19888 13 -     24835 AATG-A--TT-AATTAT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             36871 13 +     45454 AATG-A--TT-AATTAT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42570 13 +     70886 AATG-A--TT-AATTAT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4697 13 +     30854 AATG-A--TT-AATTAT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             28836 13 +     42133 AATG-A--TT-AATTAT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583307 11 +   2318259 AAAG-G--TTTAAT---
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 61
s Anoura_caudifer.AnoCau_scaffold_1412                      172061 11 -    412891 CAGG-G--TTGAAT---
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 39
s Antilocapra_americana.AntAmePen_scaffold_21030             48394 11 -     68529 AATA-T--TTTAAT---
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 70
s Aotus_azarae.k141_118258                                   46641 13 -     65372 AATG-A--TT-AATTAT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40389 13 +     43593 AATG-A--TT-AATTAT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668399 13 +   5030052 AAtg-a--tt-aattat
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20043 13 -     23494 AATG-A--TT-AATTAT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5177 13 +      8415 AATG-A--TT-AATTAT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5608  5 -     32367 -----T--TTTA-----
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_859459                   22 11 -       293 CAGG-G--TTGAGT---
i Artibeus_jamaicensis.ArtJam_scaffold_859459            C 0 I 39
s Ateles_geoffroyi_b.tarseq_1536                               270633 13 +  21539123 AATG-A--TT-AATTAT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6804 13 +     48076 AATG-A--TT-AATTAT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   1939 13 -     28759 AATG-A--TT-AATTAT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29490 13 +     44353 AATG-A--TT-AATTAT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              44865 13 -     71267 AATG-A--TT-AATTAT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                18921 13 -     33135 AATG-A--TT-AATTAT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2058 14 +     11645 AATGTT--TT-AATTAT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2060 14 -     19611 AATGTT--TT-AATTAT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955144 11 -  23207421 aatg-t--tttaat---
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 52
s Balaenoptera_bonaerensis.DF507193.1                         2352 11 -      4711 aatg-t--tttaat---
i Balaenoptera_bonaerensis.DF507193.1                    C 0 I 52
s Beatragus_hunteri.BeaHun_scaffold_7278                     84296 11 +    124022 AAAG-G--TTTAAT---
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 66
s Bison_bison.KN261452.1                                     19823 11 +    288883 AAAG-T--TTTAAt---
i Bison_bison.KN261452.1                                 C 0 I 70
s Bos_indicus.CM003047.1                                  20354210 11 +  48749331 NAAG-T--TTTAAT---
i Bos_indicus.CM003047.1                                 C 0 I 70
s Bos_mutus.JH880303.1                                      752782 11 +   1948126 AAAG-T--TTTAAt---
i Bos_mutus.JH880303.1                                   C 0 I 66
s Bos_taurus.CM000203.6                                   27542917 11 -  45695690 CAAG-T--TTTAAT---
i Bos_taurus.CM000203.6                                  C 0 I 70
s Bubalus_bubalis.KI419123.1                               1527941 11 -   4408762 AAAG-T--TTTAAt---
i Bubalus_bubalis.KI419123.1                             C 0 I 70
s Cacajao_ayresi.k141_96119                                   3824 13 +     28062 AACG-A--AT-AATTAT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39119 13 -     91139 AACG-A--AT-AATTAT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16644 13 +     95584 AATG-A--AT-AATTAT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16557 13 +    119600 AATG-A--AT-AATTAT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5755 13 -     13885 AATG-A--TT-AATTGT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14440 13 +     17162 AATG-A--TT-AATTAT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449396 13 + 189096842 AATG-A--TT-AATTAT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15689 13 -     18408 AATG-A--TT-AATTAT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629137 11 +  17673402 aatg-t--tttaat---
i Camelus_bactrianus.KN276810.1                          C 0 I 56
s Camelus_dromedarius.KN272107.1                           4663423 11 +   7040546 aatg-t--tttaat---
i Camelus_dromedarius.KN272107.1                         C 0 I 56
s Camelus_ferus.KB017975.1                                 1207083 11 +   1652518 aatg-t--tttaat---
i Camelus_ferus.KB017975.1                               C 0 I 56
s CanFam4.chr16                                           42500850 11 +  60362399 AATG-T--TTTAAT---
i CanFam4.chr16                                          C 0 I 44
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4480 11 -     23171 AATG-T--TTTAAT---
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 44
s Canis_lupus_dingo.QKWQ01000480.1                          217841 11 +   9314153 AATG-T--TTTAAT---
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 44
s Canis_lupus_familiaris.chr16                            41610966 11 +  59632846 aaat-g--tttaat---
i Canis_lupus_familiaris.chr16                           C 0 I 44
s Canis_lupus_orion.HG994398.1                            45102536 11 -  63665305 AATG-T--TTTAAT---
i Canis_lupus_orion.HG994398.1                           C 0 I 44
s Capra_aegagrus.CM003241.1                               27407014 11 -  46296322 AAAG-G--TTTAAT---
i Capra_aegagrus.CM003241.1                              C 0 I 65
s Capra_hircus.CM004588.1                                 26589287 11 +  44709034 AAAG-G--TTTAAT---
i Capra_hircus.CM004588.1                                C 0 I 65
s Carlito_syrichta.NW_007259797.1                           265179 14 +    496798 aatg-t--tttaattat
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    18006  9 -     39886 AGTG-T--CTTA-----
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     74839 11 -    217609 AATA-T--TTTAAT---
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 56
s Cebuella_niveiventris.k141_748279                           1029 13 -      1068 AATG-A--TT-AATTAT
i Cebuella_niveiventris.k141_748279                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               38860 13 +     53515 AATG-A--TT-AATTAT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367088 13 -  26074798 AATG-A--TT-AATTAT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                3977 13 -     34880 AATG-A--TT-AATTAT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63072 13 -     89041 AATG-A--TT-AATTAT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13450 14 -     50533 AATG-T--TTTAATTAT
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15487771 11 -  27778364 AATG-T--TTTAAT---
i Ceratotherium_simum.JH767749.1                         C 0 I 67
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14604 11 +     27315 AATG-T--TTTAAT---
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 67
s Cercocebus_atys.KQ010504.1                                136558 13 -   4669795 AATG-G--TT-AATTAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40299 13 +     47900 AATG-G--TT-AATTAT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40131 13 -     44860 AATG-G--tt-aattat
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40113 13 -    148725 AATG-G--tt-aattat
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23099 13 -     40656 AATG-G--tt-aattat
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3107 13 +     20796 AATG-G--TT-AATTAT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7362 13 -     17524 AATG-G--tt-aattat
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23054 13 -     34525 AATG-G--tt-aattat
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7774 13 -     25376 AATG-G--tt-aattat
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360251 13 -  39242232 AATG-G--TT-AATTAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266079 13 +  21565898 AATG-G--TT-AATTAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27525 13 -     45857 AATG-G--tt-aattat
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23316 13 -     32606 AATG-G--TT-AATTAT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      26965 13 +     27662 AATG-G--TT-AATTAT
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21015 13 +     70610 AATG-G--TT-AATTAT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         17880 13 +     36323 AATG-G--TT-AATTAT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             26480 14 -     33796 AATGTT--TT-AATTAT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              674 14 -     15404 AATGTT--TT-AATTAT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             4922 13 -     32913 AATG-A--AT-AATTAT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15335 13 -     40346 AATG-A--AT-AATTAT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15599 13 +    216457 AATG-A--AT-AATTAT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15377 13 +     39636 AATG-A--AT-AATTAT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16426 13 -     17061 AATG-A--TT-AATtat
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38464 13 -    112038 AACG-A--AT-GATTAT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4036 13 +     34062 AACG-A--AT-GATTAT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338778 13 +  18827391 AATG-G--TT-AATTAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5382 13 -     44032 AATG-G--tt-aattat
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300104 13 - 135778131 AATG-G--TT-AATTAT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404635 13 -   2368649 AATG-G--TT-AATTAT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373825 13 - 200372422 AATG-G--tt-aattat
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4519 13 -      6605 AATG-G--TT-AATTAT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802721 11 +  53390261 AAcc-t--tttaat---
i Condylura_cristata.JH655891.1                          C 0 I 48
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8296 11 +     10921 AATG-G--TGGAAT---
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 I 64
s Cricetomys_gambianus.CriGam_scaffold_14425                 38354  9 -     83289 AATA-T--TTTA-----
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45259 11 -     47254 AATG-T--TTTAAT---
i Cryptoprocta_ferox.CryFer_flattened_line_24933         C 0 I 48
s Ctenodactylus_gundi.CteGun_scaffold_65                    640247  9 -   1526836 AGTA-T--TTTC-----
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288497 14 +  12879189 AATGCT--TT-ACTTAC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623477 11 -  35494412 aatg-t--tttaat---
i Delphinapterus_leucas.KZ290073.1                       C 0 I 52
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660197  4 -   1390856 AATG-------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134592 11 -    198055 AATG-T--TTTAAT---
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 55
s Eidolon_helvum.AWHC01266696.1                               1670 12 +     19438 AATG-T-GTTGAat---
i Eidolon_helvum.AWHC01266696.1                          C 0 I 45
s Elaphurus_davidianus.JRFZ01104969.1                       237686 11 -    607251 aata-t--tttaat---
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 70
s Ellobius_lutescens.LOEQ01008920.1                          26176  9 +    110024 attg-t--ttta-----
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                            8094  9 +     18970 gttg-t--ttta-----
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24905837 11 +  41312741 gata-t--tttaat---
i Enhydra_lutris.KZ291758.1                              C 0 I 56
s Eptesicus_fuscus.JH977646.1                             12572724 11 +  14770903 AATG-T--CTGAGt---
i Eptesicus_fuscus.JH977646.1                            C 0 I 562
s Equus_asinus.JREZ01000139.1                              3037228 11 -   4378816 AATG-T--TTTAAT---
i Equus_asinus.JREZ01000139.1                            C 0 I 87
s Equus_caballus.CM000403.2                               21371159 11 +  39960074 AATG-T--tttaat---
i Equus_caballus.CM000403.2                              C 0 I 89
s Equus_przewalskii.KK951119.1                              407945 11 -    498745 AATG-T--TTTAAT---
i Equus_przewalskii.KK951119.1                           C 0 I 89
s Erythrocebus_patas.Contig38                               258334 13 +  21539334 AATG-G--CT-AATTAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63025 11 -    133382 AATG-T--TTTAAT---
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 52
s Eubalaena_japonica.EubJap_flattened_line_118172             3239 11 +      7672 AATG-T--TTTAAT---
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 I 52
s Eulemur_albifrons.k141_51491                               11458 14 -     24895 AATGTT--TT-AATTAT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39170 14 -     70999 AATGTT--TT-AATTAT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83130 14 +    112731 AATGTT--TT-AATTAT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39702 14 +     68309 AATGTT--TT-AATTAT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50027 14 -     65740 AATGTt--tt-aattat
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20657 14 -     75513 AATGTt--tt-aattat
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 44850 14 -     97555 AATGTt--tt-aattat
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1577 14 +     30972 AATGTT--TT-AATTAT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39300 14 -     52037 AATGTT--TT-AATTAT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55701 14 -    111500 AATGTT--TT-AATTAT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242257 11 - 206538554 aatg-t--tttaat---
i Felis_catus.CM001381.2                                 C 0 I 67
s Felis_catus_fca126.CM031415.1                          185112033 11 - 205367284 aatg-t--tttaat---
i Felis_catus_fca126.CM031415.1                          C 0 I 73
s Felis_nigripes.FelNig_flattened_line_31944                 23405 11 -     30238 AATG-T--TTTAAT---
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 49
s Galeopterus_variegatus.GalVar_scaffold_74466               14217 14 +     18121 AATG-T--TTTAATTAT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89361 11 -     95226 AATG-T--TTTAAT---
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 70
s Glis_glis.GliGli_scaffold_33859                            31231  9 -     36801 agtg-t--tcta-----
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                                446 13 -      8343 AATG-G--TT-AATTAT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                249940 13 - 186649187 AATG-g--tt-aattat
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   10838  9 +     11903 GGTG-T--TTTA-----
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11391 14 -     40692 AATGTC--tt-aattat
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32793 14 +     49394 AATGTC--TT-AATTAT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57661 14 -     66874 AATGTC--TT-AATTAT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6538 14 -     42923 AATGTC--tt-aattat
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13534 14 -     53142 AATGTC--tt-aattat
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26197 11 -    327341 AATG-T--TTTAAT---
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 35
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7120 11 +     48891 AAAG-G--TTTAAT---
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 63
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10659 11 +     12639 AATG-C--TTTGGT---
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5723 11 -     36432 AATG-T--TTTAAT---
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 52
s Hipposideros_armiger.JXIK01000431.1                      1545538 11 -   1711038 AATG-T--TTgaat---
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 69
s Hipposideros_galeritus.HipGal_scaffold_23202               44829 11 +     49977 AATG-T--TTGAAT---
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 69
s Hoolock_leuconedys.ctg274                                    137840 13 -    630532 AATG-G--TT-AATTAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                                868 13 +     12352 AATG-G--TT-AGTTAT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8051 13 +     55766 AATG-G--TT-AGTTAT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047395 13 + 191637585 AATG-G--TT-AATTAT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796727 13 +  11177569 AATG-G--TT-AATTAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2563  9 -    135385 AGTG-A--TTTA-----
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374663  5 +   7955117 -----t--ttca-----
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2435083                                     738 14 +      1070 AATGTT--TT-AATTAT
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1259 11 -     16823 AATG-T--TTTAAT---
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 52
s Jaculus_jaculus.JH725527.1                               1232500 11 +   9596543 AGTG-TCCTTTA-----
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 63764 11 -     97402 AATG-T--TTTAAT---
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 50
s Lagothrix_lagothricha.k141_246028                          39185 13 +    110728 AATG-A--TT-AATTAT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58285 11 -     65777 AATG-T--CTCAGT---
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 503
s Lemur_catta.scaffold_24                                 14756183 14 +  30322482 AATGTC--TT-AATTAT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        4837 13 -      5330 AAGG-A--TT-AATtat
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16274 13 -     16762 AAGG-A--TT-AATTAT
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16573 13 -     17065 AAGG-A--TT-AATtat
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6098 13 -     11567 AATG-A--TT-AATtat
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7479 13 -     12945 AATG-A--TT-AATtat
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          4837 14 +     29618 AATGTT--TT-AATTAT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4836 14 +     31569 AATGTT--TT-AATTAT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          4844 14 +     24756 AATGTT--TT-AATTAT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       4841 14 +     16388 AATGTT--TT-AATTAT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        808924 11 -   3914936 agtg-t--tttaat---
i Leptonychotes_weddellii.KB714746.1                     C 0 I 54
s Lipotes_vexillifer.KE559953.1                             332782 11 +    662738 aatg-t--tttaat---
i Lipotes_vexillifer.KE559953.1                          C 0 I 52
s Lophocebus_aterrimus.ctg367                               328514 13 -   1826925 AATG-G--tt-aattat
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39075839 11 +  43346337 AATG-C--TTTGAT---
i Loxodonta_africana.GL010049.1                          C 0 I 6
s Lycaon_pictus.CM007581.1                                41610121 11 +  59628241 aaat-g--tttaat---
i Lycaon_pictus.CM007581.1                               C 0 I 44
s Macaca_arctoides.k141_1757516                              40795 13 -     61512 AATG-G--tt-aattat
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368423 13 -  60120075 AATG-G--tt-aattat
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20742 13 +     30207 AATG-G--TT-AATTAT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           17845 13 -     24934 AATG-G--tt-aattat
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20629 13 +     30527 AATG-G--TT-AATTAT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31818 13 -     50087 AATG-G--tt-aattat
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41556 13 +     51645 AATG-G--TT-AATTAT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410130 13 - 187317192 AATG-G--TT-AATTAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395013 13 +  25927173 AATG-G--TT-AATTAT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44145 13 -     62418 AATG-G--tt-aattat
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                20832 13 +     24253 AATG-G--TT-AATTAT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40589 13 +     59329 AATG-G--TT-AATTAT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266421 13 +    668171 AATG-G--TT-AATTAT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17767 13 +     21031 AATG-G--TT-AATTAT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31499 13 +     33478 AATG-G--TT-AATTAT
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218749 11 -    270270 AATG-T--TTGAAT---
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 43
s Mandrillus_leucophaeus.scaffold280                        317897 13 +  24302211 AATG-G--TT-AATTAT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352729 13 -    752769 AATG-G--tt-aattat
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669500 11 -    737560 AATG-T--TTTTGT---
i Manis_javanica.JSZB01003497.1                          C 0 I 37
s Manis_pentadactyla.KN006162.1                             216793 11 +    317179 AATG-T--TTTTGT---
i Manis_pentadactyla.KN006162.1                          C 0 I 37
s Marmota_marmota.CZRN01000018.1                           7488763  5 +  40650429 -----t--ttca-----
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       145804  9 +    207569 A--G-T--TTGAAT---
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 61
s Mellivora_capensis.MelCap_flattened_line_19308             13849 11 -     74585 AATA-T--TTTAAT---
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 56
s Meriones_unguiculatus.MerUng_scaffold_7390                 44712  9 -    140813 AGCC-T--CTTA-----
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79324 11 +     93471 AATG-T--TTTCAT---
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 52
s Mico_argentatus.k141_582562                                 5863 13 +     17804 AATG-A--TT-AATTAT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6635 13 -     12984 AATG-A--TT-AATTAT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14598 13 -     26561 AATG-A--TT-AATTAT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980441 14 +  93316391 aatgtt--tt-aattat
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180068 11 +    200668 CGTC-G--TTGGAT---
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 39
s Microtus_ochrogaster.CM001695.1                         15959592  9 +  27267610 attg-t--ttta-----
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360434 11 -   8254450 AGTG-t--ttgaat---
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 39
s Miniopterus_schreibersii.MinSch_scaffold_23309             39328 11 -     48117 AGTG-T--TTGAAT---
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 46
s Miopithecus_ogouensis.k141_1534655                         17808 13 -     27822 AATG-G--tt-aattat
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         3940 11 +     27589 AGTG-T--TTTACT---
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 54
s Mirza_zaza.k141_766280                                     48304 14 -     62432 AATGTt--tt-aattat
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351220 11 +    437263 AATG-T--TTTAAT---
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 52
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174240 11 +    366855 CATG-G--TTGAAT---
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 39
s Moschus_moschiferus.MosMos_scaffold_13123                  22277 11 -     82753 AATA-T--TTTAAT---
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 68
s Mungos_mungo.MunMun_flattened_line_18455                   13972 11 -     63510 AGTG-T--TTTAAT---
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 37
s Murina_feae.MurFea_scaffold_17764                          33160 11 +     47283 AATG-T--CTGAGT---
i Murina_feae.MurFea_scaffold_17764                      C 0 I 39
s Mus_caroli.LT608237.1                                   35584823  9 + 120012414 agtg-t--ttta-----
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41679214  9 + 129401213 agtg-t--ttta-----
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58212838  9 +  89631738 agtg-t--ttta-----
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39486323  9 + 130317789 agtg-t--ttta-----
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             79882  9 -     86153 ggtg-t--ttta-----
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 241 C 0
s Mustela_putorius.JH418006.1                             14342850 11 +  14710649 gata-t--tttaat---
i Mustela_putorius.JH418006.1                            C 0 I 56
s Myotis_brandtii.KE162005.1                               9787609 11 +  10118263 AATG-T--CTGAGT---
i Myotis_brandtii.KE162005.1                             C 0 I 39
s Myotis_davidii.KB100139.1                                4377995 11 +   6019432 AATG-T--CTGAGT---
i Myotis_davidii.KB100139.1                              C 0 I 39
s Myotis_lucifugus.GL432175.1                                18239 11 -     39439 AATG-T--CTGAGt---
i Myotis_lucifugus.GL432175.1                            C 0 I 39
s Myotis_myotis.MyoMyo_scaffold_185951                        1553 11 +      3929 AATG-T--CTGAGT---
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 I 39
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108682 11 +    130748 AACA-T--CTTAAT---
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 6
s Nasalis_larvatus.k141_1350636                              24173 13 +     34575 AATG-G--TT-AATTAT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464338 11 -  31847680 aatg-t--tttaat---
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 52
s Neophocaena_asiaeorientalis.KZ687982.1                   1225393 11 -   7148211 aatg-t--tttaat---
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 52
s Noctilio_leporinus.NocLep_scaffold_7894                   120196 11 -    149072 AATG-G--TTGAAC---
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 120
s Nomascus_annamensis.k141_1771965                           49125 13 -    132029 AATG-G--tt-aattat
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5221 13 -     16345 AATG-G--tt-aattat
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11104 13 +     22201 AATG-G--TT-AATTAT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409441 13 -  22158432 AATG-G--tt-aattat
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21504 13 -     54323 AATG-G--tt-aattat
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193734 11 +   9404916 AATG-T--TTTACT---
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 47
s Ochotona_princeps.JH802162.1                             2566598  5 -   3988456 ---------TCaat---
i Ochotona_princeps.JH802162.1                           I 3 I 5
s Odobenus_rosmarus.KB229312.1                             1447109 11 +   2017862 aatg-t--tttaat---
i Odobenus_rosmarus.KB229312.1                           C 0 I 54
s Odocoileus_virginianus.KZ100018.1                         434256 11 -    630418 aata-t--tttaat---
i Odocoileus_virginianus.KZ100018.1                      C 0 I 70
s Okapia_johnstoni.LVCL01S0005463.1                          12244 11 +    150152 Aatg-t--tttaat---
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 70
s Ondatra_zibethicus.OndZib_scaffold_7387                    85847  9 -    140218 ATTG-T--TTAA-----
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   103177  9 +    107918 AGTG-T--TTTA-----
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orcinus_orca.KB316932.1                                  8094658 11 +  10937097 aatg-t--tttaat---
i Orcinus_orca.KB316932.1                                C 0 I 52
s Otocyon_megalotis.JAEUCK010005147.1                        34799 11 +    559221 AATG-T--TTTAAT---
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 48
s Ovis_aries.CM001607.2                                   26402238 11 -  44047080 AAAG-G--TTTAAT---
i Ovis_aries.CM001607.2                                  C 0 I 65
s Ovis_canadensis.OviCan_scaffold_67953                       2757 11 +     17875 AAAG-G--TTTAAT---
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 65
s Pan_troglodytes.CM009242.2                               1467328 13 - 189151597 AATg-g--tt-aattat
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   19981 11 -    230217 AATG-T--TTTAAT---
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 65
s Panthera_pardus.KV860321.1                              18457303 11 -  18783137 aatg-t--tttaat---
i Panthera_pardus.KV860321.1                             C 0 I 65
s Panthera_tigris.KE722367.1                               3968040 11 +   8748460 Aatg-t--tttaat---
i Panthera_tigris.KE722367.1                             C 0 I 57
s Pantholops_hodgsonii.KE114653.1                          1613686 11 +   2937107 AAAG-A--TTTAAT---
i Pantholops_hodgsonii.KE114653.1                        C 0 I 63
s Papio_anubis.CM001495.2                                   238741 13 - 183742232 AATG-G--TT-AATTAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5208 13 +     21308 AATG-G--TT-AATTAT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286245 13 -  20919399 AATG-G--tt-aattat
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  17861 13 -     27687 AATG-G--tt-aattat
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    10997 13 +     16796 AATG-G--TT-AATTAT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17807 13 -     23640 AATG-G--tt-aattat
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10897 11 +     78924 AATG-T--TTTAAT---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 62
s Peromyscus_maniculatus.KI615324.1                         242841  9 +  18517816 AGTG-T--TTTA-----
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10521 11 -     15039 AATG-T--TTTAAT---
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 I 52
s Piliocolobus_badius.k141_2495623                            4627 13 +      7560 AATG-G--TT-AATTAT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60334 13 -     63152 AATG-G--tt-aattat
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            42933 13 +     45295 AATG-G--TT-AATTAT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     612 13 +      5735 AATG-G--TT-AATTAT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            44903 11 +     46691 AATG-T--CTGAAT---
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 I 571
s Pithecia_albicans.k141_1239476                             60813 13 +    207309 AACG-A--AT-AATTAT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          1933 13 -     25401 AACT-A--AT-AATtat
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27648 13 +     58159 AACG-A--AT-AATTAT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         27924 13 +     63561 AACG-A--AT-AATTAT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27687 13 +     51148 AACG-A--AT-AATTAT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552682 13 -   4542175 AACT-A--AT-AATtat
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27671 13 +     51125 AACG-A--AT-AATTAT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2605 11 -      8168 AATG-T--TTTAAT---
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 I 50
s Plecturocebus_bernhardi.k141_2549090                        4106 13 +     39866 AATG-A--AT-AATTAT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_89578                           3890 13 -      4004 AATG-A--AT-AATTAT
i Plecturocebus_brunneus.k141_89578                      C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38595 13 -     87950 AATG-A--AT-AATTAT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     38988 13 -     88961 AATG-A--AT-AATTAT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3688 13 -     39403 AATG-A--AT-AATTAT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38641 13 +     87928 AATG-A--AT-AATTAT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3684 13 -     60166 AATG-A--AT-AATTAT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10620 13 -     67232 AATG-A--AT-AATTAT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38537 13 -     90634 AATG-A--AT-AATTAT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40004 13 +     89403 AATG-A--AT-AATTAT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   172945 13 - 189387572 AATa-g--tt-aattat
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      187943 13 -   9816681 AATA-G--TT-AATTAT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23113 13 +     69807 GATG-G--TT-AATTAT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40308 13 -     80239 GATG-G--tt-aattat
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7808 11 +     14086 AATG-C--TTTGGT---
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 I 13
s Prolemur_simus.MPIZ01000396.1                            1979341 14 +   4620579 AATGTc--tt-aattat
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1561923 14 -   2598838 AATGTT--TT-AATTAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79016 14 -     79582 AATGTT--TT-AATTAT
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              161 14 -     11706 AATGTT--TT-AATTAT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            3896 14 -     30655 AATGTT--TT-AATTAT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30225 14 +     46564 AATGTT--TT-AATTAT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90516 14 -     98465 AATGTT--TT-AATTAT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4138 14 +     35169 AATGTT--TT-AATTAT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            32206  9 +     52041 AGCC-T--TTTA-----
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47317 11 -     66298 AATG-G--ttgaat---
i Pteronotus_parnellii.KE847780.1                        C 0 I 41
s Pteronura_brasiliensis.PteBra_flattened_line_59017          3989 11 -     10349 GATA-T--TTTAAT---
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 I 55
s Pteropus_alecto.KB030862.1                               5836214 11 -  28871421 aatg-t--ttgaat---
i Pteropus_alecto.KB030862.1                             C 0 I 45
s Pteropus_vampyrus.KN525825.1                             3532790 11 -   4952924 AATG-T--TTGAAT---
i Pteropus_vampyrus.KN525825.1                           C 0 I 45
s Puma_concolor.QAVW01001104.1                            18094865 11 +  38429054 aatg-t--tttaat---
i Puma_concolor.QAVW01001104.1                           C 0 I 55
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51213 11 +     55069 AATA-T--TTTAAT---
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 70
s Rattus_norvegicus.chr16                                 37011552  9 -  90668790 agtg-t--ttta-----
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2908308 11 +   3329780 AATG-t--ttgaat---
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 69
s Rhinopithecus_bieti.k119_221883                            24331 13 +     27361 AATG-G--TT-AATTAT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117690 13 + 195417433 AATG-G--TT-AATTAT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             231939 13 -   7961872 AATG-G--tt-aattat
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70265 11 -    116970 AATG-T--TTGAAT---
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 45
s Saguinus_bicolor.k141_1125626                              16329 13 +     16959 AATG-A--TT-AATTAT
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38179 13 +     72255 AATG-A--TT-AATTAT
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            10820 13 +     11432 AATG-A--TT-AATTAT
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16195 13 -     16755 AATG-A--TT-AATtat
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14765 13 -     15289 AATG-A--TT-AATtat
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386761 13 - 209938924 AATG-A--TT-AATtat
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7626 13 +     22212 AATG-A--TT-AATTAT
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16123 13 +     39756 AATG-A--TT-AATTAT
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        5829 11 +     16473 AAAG-T--TTTAGT---
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 63
s Sapajus_apella.ctg103                                     234312 13 +   5703754 AATG-A--TT-AATTAT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           3902 13 +     21866 AATG-A--TT-AATTAT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111778 11 +    313613 AACC-T--TTTAAT---
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 73
s Semnopithecus_entellus.k141_158471                         20821 13 +     27374 AATG-G--TT-AATTAT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24336 13 +     58920 AATG-G--TT-AATTAT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           10833 13 -     45317 AATG-G--tt-aattat
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18490 13 -     42441 AATG-G--tt-aattat
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21172 13 -     29113 AATG-G--tt-aattat
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24244 13 -     48123 AATG-G--tt-aattat
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    44128  9 +     77746 AGTG-T--TTTA-----
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1853970 11 -   1910179 AATG-T--TTCAAT---
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 62
s Spermophilus_dauricus.KZ294078.1                         1854977  5 +   3870691 -----t--ttca-----
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              1863 11 -     97271 AATG-T--TTTCAT---
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 47
s Suricata_suricatta.SurSur_flattened_line_6629             120568 11 +    196729 AATG-T--TTTAAT---
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 33
s Sus_scrofa.CM000828.4                                    6639307 11 +  69701581 aatg-t--tttaat---
i Sus_scrofa.CM000828.4                                  C 0 I 58
s Symphalangus_syndactylus.tarseq_199                       386417 13 +   1523678 AATG-G--TT-AATTAT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                10908 11 +     22964 AATG-T--TTGAAC---
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 43
s Tamandua_tetradactyla.TamTet_scaffold_67439                23639 11 -     25844 AATA-T--CTTAAT---
i Tamandua_tetradactyla.TamTet_scaffold_67439            C 0 I 6
s Tapirus_indicus.TapInd_scaffold_7432                      187020 11 +    199430 AATG-T--TTTAAT---
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 68
s Tapirus_terrestris.TapTer_scaffold_755                    100979 11 -    539355 AATG-T--TTTAAT---
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 64
s Tarsius_lariang.k141_1780720                                2784 14 +      6850 AATG-T--TTTAATTAT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                2866 14 +     20590 AATG-T--TTTAATTAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348726 13 - 186847797 AATG-G--TT-AATTAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475106 11 -    610378 CAGG-G--TGGAGT---
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 39
s Trachypithecus_auratus.k141_1189070                        16385 13 +     26378 AATG-G--TT-AATTAT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29066 13 -     78344 AATG-G--tt-aattat
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15706 13 +     25722 AATG-G--TT-AATTAT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      23929 13 -     62838 AATG-G--tt-aattat
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24048 13 +     46913 AATG-G--TT-AATTAT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          4856 13 -     28527 AATG-G--tt-aattat
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      25868 13 -     64340 AATG-G--tt-aattat
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          23905 13 -     63452 AATG-G--tt-aattat
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5347 13 +     22490 AATG-G--TT-AATTAT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         2967 13 +      4141 AATG-G--TT-AATTAT
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5773 13 -     13050 AATG-G--tt-aattat
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251010 13 -   6242583 AATG-G--tt-aattat
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56742 13 +     59866 AATG-G--TT-AATTAT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   171940 11 -    200418 AATG-T--TTTAAT---
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 36
s Trichechus_manatus.JH594705.1                            6478464 11 -  10818551 AATG-T--TTTGAT---
i Trichechus_manatus.JH594705.1                          C 0 I 6
s Tupaia_chinensis.KB320699.1                              1825004  1 -   4065304 t----------------
i Tupaia_chinensis.KB320699.1                            C 0 I 383
s Tupaia_tana.TupTan_flattened_line_394                       2405  1 -     70247 T----------------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 377
s Tursiops_truncatus.MRVK01000835.1                       17359397 11 -  33153633 aatg-t--tttaat---
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 52
s Uropsilus_gracilis.UroGra_scaffold_7153                   103201 11 -    105689 AACA-T--TTTAAT---
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 62
s Ursus_maritimus.KK499267.1                                177079 11 +   5085361 AATG-T--TTTAAT---
i Ursus_maritimus.KK499267.1                             C 0 I 57
s Varecia_rubra.k141_787544                                  20971 14 -     30710 AATGTT--TT-AATTAT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              19879 14 -    147434 AATGTt--tt-aattat
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74476 11 +   5488506 aatg-t--tttaat---
i Vicugna_pacos.KN270157.1                               C 0 I 56
s Vulpes_lagopus.VulLag_flattened_line_12041                100484 11 -    112863 AATG-T--TTTAAT---
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 45
s Xerus_inauris.XerIna_scaffold_2302                        161950  9 -    224448 GGTG-T--TTTA-----
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24324 11 -     86975 AATG-T--TTTAAT---
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 58
s Zapus_hudsonius.ZapHud_scaffold_95421                      12721  9 -     12806 AGTA-T--TTTA-----
i Zapus_hudsonius.ZapHud_scaffold_95421                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2660542             48 11 +       358 AATG-T--TTTCAT---
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      C 0 I 52
e Oryctolagus_cuniculus.CM000791.1                       107098823  0 - 174332312 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542  0 +     83186 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        101 6 +     36723 ATATGT
s Allenopithecus_nigroviridis.k141_3755588                   43411 6 +     53615 AGATGT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39226 6 +     44087 AGATGT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68146 6 -     84148 GTATAT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40369 6 -     78289 GTATAT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39817 6 +     55831 GTATAT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38258 6 -     64179 GTATAT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           19901 6 -     24835 GTATAT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             36884 6 +     45454 GTATAT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42583 6 +     70886 GTATAT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4710 6 +     30854 GTATAT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             28849 6 +     42133 GTATAT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   46654 6 -     65372 ATATAT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40402 6 +     43593 ATATAT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668412 6 +   5030052 atatat
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20056 6 -     23494 ATATAT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5190 6 +      8415 ATATGT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270646 6 +  21539123 ATATAT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6817 6 +     48076 ATATAT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   1952 6 -     28759 ATATAT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29503 6 +     44353 ATATAT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              44878 6 -     71267 ATATAT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                18934 6 -     33135 ATATAT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2072 6 +     11645 ACACGT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2074 6 -     19611 ACACGT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   3837 6 +     28062 ATATAT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39132 6 -     91139 ATATAT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16657 6 +     95584 ATATAT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16570 6 +    119600 ATATAT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5768 6 -     13885 ATATAT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14453 6 +     17162 ATATAT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449409 6 + 189096842 ATATAT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15702 6 -     18408 ATATAT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265193 6 +    496798 atatgt
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cebuella_niveiventris.k141_748279                           1042 6 -      1068 ATATAT
i Cebuella_niveiventris.k141_748279                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               38873 6 +     53515 ATATAT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367101 6 -  26074798 ATAGAT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                3990 6 -     34880 ATAGAT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63085 6 -     89041 ATAGAT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13464 6 -     50533 ATATGT
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                136571 6 -   4669795 AGATGT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40312 6 +     47900 AGATGT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40144 6 -     44860 agatgt
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40126 6 -    148725 agatgt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23112 6 -     40656 agatgt
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3120 6 +     20796 AGATGT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7375 6 -     17524 agatgt
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23067 6 -     34525 agatgt
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7787 6 -     25376 agatgt
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360264 6 -  39242232 AGATGT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266092 6 +  21565898 AGATGT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27538 6 -     45857 agatgt
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23329 6 -     32606 AGATGT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      26978 6 +     27662 AGATGT
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21028 6 +     70610 AGATGT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         17893 6 +     36323 AGATGT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             26494 6 -     33796 ATTTGT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              688 6 -     15404 ATTTGT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             4935 6 -     32913 ATATAC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15348 6 -     40346 ATATAT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15612 6 +    216457 ATATAT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15390 6 +     39636 ATATAT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16439 6 -     17061 ctatac
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38477 6 -    112038 ATATAT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4049 6 +     34062 ATATAT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338791 6 +  18827391 AGATGT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5395 6 -     44032 agatgt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300117 6 - 135778131 AGATGT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404648 6 -   2368649 GGATGT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373838 6 - 200372422 agatgt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4532 6 -      6605 GGATGT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288511 6 +  12879189 ATACGT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                               258347 6 +  21539334 AGACAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               11472 6 -     24895 ATATGT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39184 6 -     70999 ATATGT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83144 6 +    112731 ATATGT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39716 6 +     68309 ATATGT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50041 6 -     65740 atatgt
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20671 6 -     75513 atatat
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 44864 6 -     97555 atatgt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1591 6 +     30972 ATATGT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39314 6 -     52037 ATATGT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55715 6 -    111500 ATATGT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14231 6 +     18121 ATATAT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 409
s Gorilla_beringei.k141_3358147                                459 6 -      8343 ATATGT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                249953 6 - 186649187 atatgt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11405 6 -     40692 atatgt
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32807 6 +     49394 ATATGT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57675 6 -     66874 ATATGT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6552 6 -     42923 atatgt
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13548 6 -     53142 atatgt
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    137853 6 -    630532 ATATGT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                                881 6 +     12352 ATATGT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8064 6 +     55766 ATATGT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047408 6 + 191637585 ATATGT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796740 6 +  11177569 ATATGT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_2435083                                     752 6 +      1070 ACACGT
i Indri_indri.k141_2435083                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39198 6 +    110728 ATATAT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14756197 6 +  30322482 ATATGT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        4850 6 -      5330 ctatac
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16287 6 -     16762 CTATAC
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16586 6 -     17065 ctatac
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6111 6 -     11567 ctatac
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7492 6 -     12945 ctatac
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          4851 6 +     29618 ATATGT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4850 6 +     31569 ATATGT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          4858 6 +     24756 ATATGT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       4855 6 +     16388 ATATGT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               328527 6 -   1826925 agatgt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              40808 6 -     61512 agatgt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368436 6 -  60120075 agatgt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20755 6 +     30207 AGATGT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           17858 6 -     24934 agatgt
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20642 6 +     30527 AGATGT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31831 6 -     50087 agatgt
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41569 6 +     51645 AGATGT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410143 6 - 187317192 AGATGT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395026 6 +  25927173 AGATGT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44158 6 -     62418 agatgt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                20845 6 +     24253 AGATGT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40602 6 +     59329 AGATGT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266434 6 +    668171 AGATGT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17780 6 +     21031 AGATGT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31512 6 +     33478 AGATGT
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        317910 6 +  24302211 AGATGT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352742 6 -    752769 agatgt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_582562                                 5876 6 +     17804 ATATAT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6648 6 -     12984 ATATAT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14611 6 -     26561 ATATAT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980455 6 +  93316391 atatgt
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         17821 6 -     27822 agatgt
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     48318 6 -     62432 atatgt
i Mirza_zaza.k141_766280                                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              24186 6 +     34575 AGATGT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           49138 6 -    132029 atatgt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5234 6 -     16345 atatgt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11117 6 +     22201 ATATGT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409454 6 -  22158432 atatgt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21517 6 -     54323 atatgt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_troglodytes.CM009242.2                               1467341 6 - 189151597 atatgt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   238754 6 - 183742232 AGATGT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5221 6 +     21308 AGATGT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286258 6 -  20919399 agatgt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  17874 6 -     27687 agatgt
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11010 6 +     16796 AGATGT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17820 6 -     23640 agatgt
i Papio_ursinus.k141_2278143                             C 0 C 0
s Piliocolobus_badius.k141_2495623                            4640 6 +      7560 AGATGT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60347 6 -     63152 agatgt
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            42946 6 +     45295 AGATGT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     625 6 +      5735 AGATGT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             60826 6 +    207309 ATATAT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          1946 6 -     25401 atatat
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27661 6 +     58159 ATATAT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         27937 6 +     63561 ATATAT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27700 6 +     51148 ATATAT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552695 6 -   4542175 atgtat
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27684 6 +     51125 ATATAT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4119 6 +     39866 ATATAT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_89578                           3903 6 -      4004 ATATAT
i Plecturocebus_brunneus.k141_89578                      C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38608 6 -     87950 ATATAT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39001 6 -     88961 ATATAT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3701 6 -     39403 ATATAT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38654 6 +     87928 ATATAT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3697 6 -     60166 ATATAT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10633 6 -     67232 ATATAT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38550 6 -     90634 ATATAT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40017 6 +     89403 ATATAT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   172958 6 - 189387572 atatgt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      187956 6 -   9816681 ATATGT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23126 6 +     69807 AGATGT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40321 6 -     80239 agatgt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979355 6 +   4620579 atatgt
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1561937 6 -   2598838 ACACGT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79030 6 -     79582 ACACGT
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              175 6 -     11706 ACACAT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            3910 6 -     30655 ACACAT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30239 6 +     46564 ACACAT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90530 6 -     98465 ACACGT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4152 6 +     35169 ACACGT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24344 6 +     27361 AGATGT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117703 6 + 195417433 AGATGT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             231952 6 -   7961872 agatgt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1125626                              16342 6 +     16959 CTATAC
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38192 6 +     72255 CTATAC
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            10833 6 +     11432 CTATAC
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16208 6 -     16755 ctatac
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14778 6 -     15289 ctatac
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386774 6 - 209938924 ctatac
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7639 6 +     22212 CTATAC
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16136 6 +     39756 CTATAC
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Sapajus_apella.ctg103                                     234325 6 +   5703754 ATAGAT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           3915 6 +     21866 ATAGAT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         20834 6 +     27374 AGATGT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24349 6 +     58920 AGATGT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           10846 6 -     45317 agatgt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18503 6 -     42441 agatgt
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21185 6 -     29113 agatgt
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24257 6 -     48123 agatgt
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386430 6 +   1523678 ATATGT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                2798 6 +      6850 ATATGT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                2880 6 +     20590 ATATGT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348739 6 - 186847797 AGATGT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16398 6 +     26378 AGATGT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29079 6 -     78344 agatgt
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15719 6 +     25722 AGATGT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      23942 6 -     62838 agatgt
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24061 6 +     46913 AGATGT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          4869 6 -     28527 agatgt
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      25881 6 -     64340 agatgt
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          23918 6 -     63452 agatgt
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5360 6 +     22490 AGATGT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         2980 6 +      4141 AGATGT
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5786 6 -     13050 agatgt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251023 6 -   6242583 agatgt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56755 6 +     59866 AGATGT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Varecia_rubra.k141_787544                                  20985 6 -     30710 ATATGT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              19893 6 -    147434 atatgt
i Varecia_variegata.k141_289850                          C 0 C 0
e Tupaia_tana.TupTan_flattened_line_394                       2406 377 -     70247 I
e Tupaia_chinensis.KB320699.1                              1825005 383 -   4065304 I
e Zalophus_californianus.ZalCal_flattened_line_17732         24335 58 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                100495 45 -    112863 I
e Ursus_maritimus.KK499267.1                                177090 57 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              1874 47 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_59017          4000 55 -     10349 I
e Otocyon_megalotis.JAEUCK010005147.1                        34810 48 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1447120 54 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                193745 47 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11464349 52 -  31847680 I
e Mustela_putorius.JH418006.1                             14342861 56 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         3951 54 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             13860 56 -     74585 I
e Lycaon_pictus.CM007581.1                                41610132 44 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        808935 54 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24905848 56 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45102547 44 -  63665305 I
e Canis_lupus_familiaris.chr16                            41610977 44 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          217852 44 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     4491 44 -     23171 I
e CanFam4.chr16                                           42500861 44 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_859459                   33 39 -       293 I
e Ailurus_fulgens.LNAC01001112.1                            211290 60 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20410433 57 +  29979442 I
e Ziphius_cavirostris.ZipCav_flattened_line_2660542             59 52 +       358 I
e Zapus_hudsonius.ZapHud_scaffold_95421                      12730 0 -     12806 C
e Xerus_inauris.XerIna_scaffold_2302                        161959 0 -    224448 C
e Vicugna_pacos.KN270157.1                                   74487 56 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_7153                   103212 62 -    105689 I
e Tursiops_truncatus.MRVK01000835.1                       17359408 52 -  33153633 I
e Trichechus_manatus.JH594705.1                            6478475 6 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    475117 39 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    100990 64 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      187031 68 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_67439                23650 6 -     25844 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                10919 43 +     22964 I
e Sus_scrofa.CM000828.4                                    6639318 58 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             120579 33 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1854982 0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1853981 62 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44137 0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    111789 73 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        5840 63 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70276 45 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2908319 69 +   3329780 I
e Rattus_norvegicus.chr16                                 37011561 0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51224 70 +     55069 I
e Puma_concolor.QAVW01001104.1                            18094876 55 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3532801 45 -   4952924 I
e Pteropus_alecto.KB030862.1                               5836225 45 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            47328 41 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32215 0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_121686                 7819 13 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           2616 50 -      8168 I
e Pipistrellus_pipistrellus.PipPip_scaffold_20257            44914 571 +     46691 I
e Phocoena_phocoena.PhoPho_flattened_line_46867              10532 52 -     15039 I
e Peromyscus_maniculatus.KI615324.1                         242850 0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10908 62 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1613697 63 +   2937107 I
e Panthera_tigris.KE722367.1                               3968051 57 +   8748460 I
e Panthera_pardus.KV860321.1                              18457314 65 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   19992 65 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       2768 65 +     17875 I
e Ovis_aries.CM001607.2                                   26402249 65 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107098823 0 - 174332312 C
e Orcinus_orca.KB316932.1                                  8094669 52 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103186 0 +    107918 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    85856 0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          12255 70 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         434267 70 -    630418 I
e Ochotona_princeps.JH802162.1                             2566603 5 -   3988456 I
e Noctilio_leporinus.NocLep_scaffold_7894                   120207 120 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1225404 52 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108693 6 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        1564 39 +      3929 I
e Myotis_lucifugus.GL432175.1                                18250 39 -     39439 I
e Myotis_davidii.KB100139.1                                4378006 39 +   6019432 I
e Myotis_brandtii.KE162005.1                               9787620 39 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             79891 0 -     86153 C
e Mus_spretus.CM004101.1                                  39486332 0 + 130317789 C
e Mus_pahari.LT608297.1                                   58212847 0 +  89631738 C
e Mus_musculus.chr8                                       41679223 0 + 129401213 C
e Mus_caroli.LT608237.1                                   35584832 0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          33171 39 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   13983 37 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22288 68 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 174251 39 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351231 52 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39339 46 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6360445 39 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15959601 0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                180079 39 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79335 52 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44721 0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       145813 61 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7488768 0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             216804 37 +    317179 I
e Manis_javanica.JSZB01003497.1                             669511 37 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                218760 43 -    270270 I
e Loxodonta_africana.GL010049.1                           39075850 6 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             332793 52 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    58296 503 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 63775 50 -     97402 I
e Jaculus_jaculus.JH725527.1                               1232511 0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1270 52 -     16823 I
e Ictidomys_tridecemlineatus.JH393364.1                     374668 0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       2572 0 -    135385 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542 0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_23202               44840 69 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1545549 69 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                5734 52 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_99956                10670 5 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7131 63 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                26208 35 -    327341 I
e Graphiurus_murinus.GraMur_scaffold_90206                   10847 0 +     11903 C
e Glis_glis.GliGli_scaffold_33859                            31240 0 -     36801 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      89372 70 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 23416 49 -     30238 I
e Felis_catus_fca126.CM031415.1                          185112044 73 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_118172             3250 52 +      7672 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           63036 52 -    133382 I
e Equus_przewalskii.KK951119.1                              407956 89 -    498745 I
e Equus_caballus.CM000403.2                               21371170 89 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3037239 87 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12572735 562 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8103 0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          26185 0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       237697 70 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               1682 45 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  134603 55 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  660201 0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18623488 52 -  35494412 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640256 0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_24933             45270 48 -     47254 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38363 0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_101005          8307 64 +     10921 I
e Condylura_cristata.JH655891.1                           35802732 48 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14615 67 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     74850 56 -    217609 I
e Castor_canadensis.CasCan_scaffold_39952                    18015 0 -     39886 C
e Capra_hircus.CM004588.1                                 26589298 65 +  44709034 I
e Capra_aegagrus.CM003241.1                               27407025 65 -  46296322 I
e Camelus_ferus.KB017975.1                                 1207094 56 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4663434 56 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7629148 56 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1527952 70 -   4408762 I
e Bos_taurus.CM000203.6                                   27542928 70 -  45695690 I
e Bos_mutus.JH880303.1                                      752793 66 +   1948126 I
e Bos_indicus.CM003047.1                                  20354221 70 +  48749331 I
e Bison_bison.KN261452.1                                     19834 70 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     84307 66 +    124022 I
e Balaenoptera_bonaerensis.DF507193.1                         2363 52 -      4711 I
e Balaenoptera_acutorostrata.KI537508.1                    7955155 52 -  23207421 I
e Aplodontia_rufa.AprRuf_scaffold_46868                       5613 0 -     32367 C
e Antilocapra_americana.AntAmePen_scaffold_21030             48405 70 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      172072 39 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583318 61 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    10084 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17723 0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           808615 61 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        107  8 +     36723 GTATATC----------------------A
s Acinonyx_jubatus.LLWD01001279.1                           808676  5 +   1699592 ---tata----------------------g
i Acinonyx_jubatus.LLWD01001279.1                        I 61 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     17723  1 +     63021 -----------------------------A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410490  5 +  29979442 ---tgta----------------------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 57 C 0
s Ailurus_fulgens.LNAC01001112.1                            211350  5 +    347723 ---tgta----------------------a
i Ailurus_fulgens.LNAC01001112.1                         I 60 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    10084  1 -     61208 -----------------------------A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43417  8 +     53615 GTATATC----------------------A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39232  8 +     44087 GTATATC----------------------A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68152  8 -     84148 GTATATT----------------------A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40375  8 -     78289 GTATATT----------------------A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39823  8 +     55831 GTATATT----------------------A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38264  8 -     64179 GTATATT----------------------A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           19907  8 -     24835 GTATATT----------------------A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             36890  8 +     45454 GTATATT----------------------A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42589  8 +     70886 GTATATT----------------------A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4716  8 +     30854 GTATATT----------------------A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             28855  8 +     42133 GTATATT----------------------A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583379  4 +   2318259 ----att----------------------a
i Ammotragus_lervia.NIVO01071767.1                       I 61 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172111  5 -    412891 ---TATC----------------------A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 39 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48475  4 -     68529 ----ATT----------------------A
i Antilocapra_americana.AntAmePen_scaffold_21030         I 70 C 0
s Aotus_azarae.k141_118258                                   46660  8 -     65372 GTATATT----------------------A
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40408  8 +     43593 GTATATT----------------------A
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668418  8 +   5030052 gtatatt----------------------a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20062  8 -     23494 GTATATT----------------------A
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5196  8 +      8415 GTATATT----------------------A
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5613  1 -     32367 -----------------------------A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 27
s Artibeus_jamaicensis.ArtJam_scaffold_859459                   72  5 -       293 ---TATC----------------------A
i Artibeus_jamaicensis.ArtJam_scaffold_859459            I 39 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270652  8 +  21539123 GTATATT----------------------A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6823  8 +     48076 GTATATT----------------------A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   1958  8 -     28759 GTATATT----------------------A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29509  8 +     44353 GTATATT----------------------A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              44884  8 -     71267 GTATATT----------------------A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                18940  8 -     33135 GTATATT----------------------A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2078  8 +     11645 GTATTTT----------------------G
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2080  8 -     19611 GTATTTT----------------------G
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955207  4 -  23207421 ----att----------------------a
i Balaenoptera_acutorostrata.KI537508.1                  I 52 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2415  4 -      4711 ----att----------------------a
i Balaenoptera_bonaerensis.DF507193.1                    I 52 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84373  4 +    124022 ----ATT----------------------A
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 66 C 0
s Bison_bison.KN261452.1                                     19904  4 +    288883 ----att----------------------a
i Bison_bison.KN261452.1                                 I 70 C 0
s Bos_indicus.CM003047.1                                  20354291  4 +  48749331 ----att----------------------a
i Bos_indicus.CM003047.1                                 I 70 C 0
s Bos_mutus.JH880303.1                                      752859  4 +   1948126 ----att----------------------a
i Bos_mutus.JH880303.1                                   I 66 C 0
s Bos_taurus.CM000203.6                                   27542998  4 -  45695690 ----att----------------------a
i Bos_taurus.CM000203.6                                  I 70 C 0
s Bubalus_bubalis.KI419123.1                               1528022  4 -   4408762 ----att----------------------a
i Bubalus_bubalis.KI419123.1                             I 70 C 0
s Cacajao_ayresi.k141_96119                                   3843  8 +     28062 GTATATT----------------------A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39138  8 -     91139 GTATATT----------------------A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16663  8 +     95584 GTATATT----------------------A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16576  8 +    119600 GTATATT----------------------A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5774  8 -     13885 GTATATT----------------------A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14459  8 +     17162 GTATATT----------------------A
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449415  8 + 189096842 GTATATT----------------------A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15708  8 -     18408 GTATATT----------------------A
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629204  5 +  17673402 ---TGTC----------------------A
i Camelus_bactrianus.KN276810.1                          I 56 C 0
s Camelus_dromedarius.KN272107.1                           4663490  5 +   7040546 ---TGTC----------------------A
i Camelus_dromedarius.KN272107.1                         I 56 C 0
s Camelus_ferus.KB017975.1                                 1207150  5 +   1652518 ---TGTC----------------------A
i Camelus_ferus.KB017975.1                               I 56 C 0
s CanFam4.chr16                                           42500905  5 +  60362399 ---TGTA----------------------A
i CanFam4.chr16                                          I 44 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4535  5 -     23171 ---TGTA----------------------A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 44 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          217896  5 +   9314153 ---TGTA----------------------A
i Canis_lupus_dingo.QKWQ01000480.1                       I 44 C 0
s Canis_lupus_familiaris.chr16                            41611021  5 +  59632846 ---TGTA----------------------A
i Canis_lupus_familiaris.chr16                           I 44 C 0
s Canis_lupus_orion.HG994398.1                            45102591  5 -  63665305 ---TGTA----------------------A
i Canis_lupus_orion.HG994398.1                           I 44 C 0
s Capra_aegagrus.CM003241.1                               27407090  4 -  46296322 ----att----------------------a
i Capra_aegagrus.CM003241.1                              I 65 C 0
s Capra_hircus.CM004588.1                                 26589363  4 +  44709034 ----att----------------------a
i Capra_hircus.CM004588.1                                I 65 C 0
s Carlito_syrichta.NW_007259797.1                           265199  8 +    496798 gtatatc----------------------a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                  9  5 +      5315 ---CATC----------------------A
i Carollia_perspicillata.CarPer_scaffold_170178          N 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    18015  1 -     39886 -----------------------------A
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     74906  4 -    217609 ----ATT----------------------A
i Catagonus_wagneri.CatWag_scaffold_2839                 I 56 C 0
s Cebuella_niveiventris.k141_748279                           1048  8 -      1068 GTATATT----------------------A
i Cebuella_niveiventris.k141_748279                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               38879  8 +     53515 GTATATT----------------------A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367107  8 -  26074798 GTATATT----------------------A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                3996  8 -     34880 GTATATT----------------------A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63091  8 -     89041 GTATATT----------------------A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13470  8 -     50533 GTATATC----------------------A
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15487849  8 -  27778364 atatatg----------------------a
i Ceratotherium_simum.JH767749.1                         I 67 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14682  8 +     27315 ATATATG----------------------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 67 C 0
s Cercocebus_atys.KQ010504.1                                136577  8 -   4669795 GTATatc----------------------a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40318  8 +     47900 GTATATC----------------------A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40150  8 -     44860 gtatatc----------------------a
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40132  8 -    148725 gtatatc----------------------a
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23118  8 -     40656 gtatatc----------------------a
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3126  8 +     20796 GTATATC----------------------A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7381  8 -     17524 gtatatc----------------------a
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23073  8 -     34525 gtatatc----------------------a
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7793  8 -     25376 gtatatc----------------------a
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360270  8 -  39242232 GTATATC----------------------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266098  8 +  21565898 GTATATC----------------------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27544  8 -     45857 gtatatc----------------------a
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23335  8 -     32606 GTATATC----------------------A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      26984  8 +     27662 GTATATC----------------------A
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21034  8 +     70610 GTATATC----------------------A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         17899  8 +     36323 GTATATC----------------------A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             26500  8 -     33796 GTATCCT----------------------G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              694  8 -     15404 GTATCTT----------------------G
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             4941  8 -     32913 GTATATT----------------------A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15354  8 -     40346 GTATATT----------------------A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15618  8 +    216457 GTATATT----------------------A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15396  8 +     39636 GTATATT----------------------A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16445  8 -     17061 gtatatt----------------------a
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38483  8 -    112038 GTATATT----------------------A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4055  8 +     34062 GTATATT----------------------A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338797  8 +  18827391 GTATATC----------------------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5401  8 -     44032 gtatatc----------------------a
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300123  8 - 135778131 GTATAtc----------------------a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404654  8 -   2368649 GTATatc----------------------a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373844  8 - 200372422 gtatatc----------------------a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4538  8 -      6605 GTATATC----------------------A
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802780  8 +  53390261 GTACttc----------------------a
i Condylura_cristata.JH655891.1                          I 48 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8371  5 +     10921 ---TATC----------------------A
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 64 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 38363  1 -     83289 -----------------------------A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45318  5 -     47254 ---CATA----------------------A
i Cryptoprocta_ferox.CryFer_flattened_line_24933         I 48 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    640256  1 -   1526836 -----------------------------A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288517  8 +  12879189 GTATATC----------------------C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623540  4 -  35494412 ----att----------------------a
i Delphinapterus_leucas.KZ290073.1                       I 52 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134658  8 -    198055 ATATATG----------------------A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 55 C 0
s Eidolon_helvum.AWHC01266696.1                               1727  5 +     19438 ---tatc----------------------a
i Eidolon_helvum.AWHC01266696.1                          I 45 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237767  4 -    607251 ----att----------------------a
i Elaphurus_davidianus.JRFZ01104969.1                    I 70 C 0
s Ellobius_lutescens.LOEQ01008920.1                          26185  1 +    110024 -----------------------------a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                            8103  1 +     18970 -----------------------------a
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24905904  5 +  41312741 ---tgta----------------------a
i Enhydra_lutris.KZ291758.1                              I 56 C 0
s Eptesicus_fuscus.JH977646.1                             12573297  5 +  14770903 ---TATC----------------------A
i Eptesicus_fuscus.JH977646.1                            I 562 C 0
s Equus_asinus.JREZ01000139.1                              3037326  8 -   4378816 atataAC----------------------A
i Equus_asinus.JREZ01000139.1                            I 87 C 0
s Equus_caballus.CM000403.2                               21371259  8 +  39960074 atataAC----------------------A
i Equus_caballus.CM000403.2                              I 89 C 0
s Equus_przewalskii.KK951119.1                              408045  8 -    498745 ATATaac----------------------a
i Equus_przewalskii.KK951119.1                           I 89 C 0
s Erythrocebus_patas.Contig38                               258353  8 +  21539334 GTATATC----------------------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63088  4 -    133382 ----ATT----------------------A
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 52 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3302  4 +      7672 ----ATT----------------------A
i Eubalaena_japonica.EubJap_flattened_line_118172        I 52 C 0
s Eulemur_albifrons.k141_51491                               11478  8 -     24895 GTATCTT----------------------G
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39190  8 -     70999 GTATCTT----------------------G
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83150  8 +    112731 GTATCTT----------------------G
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39722  8 +     68309 GTATCTT----------------------G
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50047  8 -     65740 gtatctt----------------------g
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20677  8 -     75513 gtacctt----------------------g
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 44870  8 -     97555 gtatctt----------------------g
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1597  8 +     30972 GTATCTT----------------------G
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39320  8 -     52037 GTATCTT----------------------G
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55721  8 -    111500 GTATCTT----------------------G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242335  5 - 206538554 ---tata----------------------g
i Felis_catus.CM001381.2                                 I 67 C 0
s Felis_catus_fca126.CM031415.1                          185112117  5 - 205367284 ---tata----------------------g
i Felis_catus_fca126.CM031415.1                          I 73 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23465  5 -     30238 ---TTTA----------------------G
i Felis_nigripes.FelNig_flattened_line_31944             I 49 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14646  8 +     18121 GTATATC----------------------A
i Galeopterus_variegatus.GalVar_scaffold_74466           I 409 I 9
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89442  4 -     95226 ----att----------------------a
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 70 C 0
s Glis_glis.GliGli_scaffold_33859                            31240  1 -     36801 -----------------------------a
i Glis_glis.GliGli_scaffold_33859                        C 0 I 60
s Gorilla_beringei.k141_3358147                                465  8 -      8343 GTATATC----------------------A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                249959  8 - 186649187 gtatatc----------------------a
i Gorilla_gorilla.LT578341.1                             C 0 I 9
s Graphiurus_murinus.GraMur_scaffold_90206                   10847  1 +     11903 -----------------------------A
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 I 51
s Hapalemur_alaotrensis.k141_330369                          11411  8 -     40692 gcatctt----------------------g
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32813  8 +     49394 GTATCTT----------------------G
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57681  8 -     66874 GTATCTT----------------------G
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6558  8 -     42923 gcatctt----------------------g
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13554  8 -     53142 gcatctt----------------------g
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26243  5 -    327341 ---TATA----------------------A
i Helogale_parvula.HelPar_flattened_line_2585            I 35 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7194  4 +     48891 ----ATT----------------------A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 63 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10675 29 +     12639 -TTTATAATTTATATATTTTAATATGTAAC
i Heterohyrax_brucei.HetBruBak_scaffold_99956            I 5 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5786  4 -     36432 ----ATT----------------------A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 52 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545618  5 -   1711038 ---tatc----------------------a
i Hipposideros_armiger.JXIK01000431.1                    I 69 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               44909  5 +     49977 ---TATC----------------------A
i Hipposideros_galeritus.HipGal_scaffold_23202           I 69 C 0
s Hoolock_leuconedys.ctg274                                    137859  8 -    630532 GTATATC----------------------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                                887  8 +     12352 GTATATC----------------------A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8070  8 +     55766 GTATATC----------------------A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047414  8 + 191637585 GTATATC----------------------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796746  8 +  11177569 GTATATC----------------------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2572  1 -    135385 -----------------------------A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374668  1 +   7955117 -----------------------------a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 38
s Indri_indri.k141_2435083                                     758  8 +      1070 GTATCTT----------------------G
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1322  4 -     16823 ----ATT----------------------A
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 52 C 0
s Jaculus_jaculus.JH725527.1                               1232511  1 +   9596543 -----------------------------A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 63825  1 -     97402 -----------------------------A
i Kogia_breviceps.KogBre_flattened_line_3970             I 50 C 0
s Lagothrix_lagothricha.k141_246028                          39204  8 +    110728 GTATATT----------------------A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58799  5 -     65777 ---TATC----------------------A
i Lasiurus_borealis.LasBor_scaffold_16567                I 503 C 0
s Lemur_catta.scaffold_24                                 14756203  8 +  30322482 GTATCTT----------------------G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        4856  8 -      5330 gtatatt----------------------a
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16293  8 -     16762 GTAAATT----------------------A
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16592  8 -     17065 gtatatt----------------------a
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6117  8 -     11567 gtatatt----------------------a
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7498  8 -     12945 gtatatt----------------------a
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          4857  8 +     29618 GTCTCTT----------------------G
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4856  8 +     31569 GTCTCTT----------------------G
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          4864  8 +     24756 GTCTCTT----------------------G
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       4861  8 +     16388 GTCTCTT----------------------G
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        808989  5 -   3914936 ---tgta----------------------a
i Leptonychotes_weddellii.KB714746.1                     I 54 C 0
s Lipotes_vexillifer.KE559953.1                             332845  4 +    662738 ----att----------------------a
i Lipotes_vexillifer.KE559953.1                          I 52 C 0
s Lophocebus_aterrimus.ctg367                               328533  8 -   1826925 gtatatc----------------------a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                41610176  5 +  59628241 ---TGTA----------------------A
i Lycaon_pictus.CM007581.1                               I 44 C 0
s Loxodonta_africana.GL010049.1                           39075856  2 +  43346337 -tt---------------------------
i Loxodonta_africana.GL010049.1                          I 6 I 4
s Macaca_arctoides.k141_1757516                              40814  8 -     61512 gtatatc----------------------a
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368442  8 -  60120075 gtatatc----------------------a
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20761  8 +     30207 GTATATC----------------------A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           17864  8 -     24934 gtatatc----------------------a
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20648  8 +     30527 GTATATC----------------------A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31837  8 -     50087 gtatatc----------------------a
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41575  8 +     51645 GTATATC----------------------A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410149  8 - 187317192 GTATAtc----------------------a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395032  8 +  25927173 GTATAtc----------------------a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44164  8 -     62418 gtatatc----------------------a
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                20851  8 +     24253 GTATATC----------------------A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40608  8 +     59329 GTATATC----------------------A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266440  8 +    668171 GTATATC----------------------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17786  8 +     21031 GTATATC----------------------A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31518  8 +     33478 GTATATC----------------------A
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218803  5 -    270270 ---TATC----------------------A
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 43 C 0
s Mandrillus_leucophaeus.scaffold280                        317916  8 +  24302211 GTATATC----------------------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352748  8 -    752769 gtatatc----------------------a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669548  4 -    737560 ----ATA----------------------A
i Manis_javanica.JSZB01003497.1                          I 37 C 0
s Manis_pentadactyla.KN006162.1                             216841  4 +    317179 ----ACA----------------------A
i Manis_pentadactyla.KN006162.1                          I 37 C 0
s Marmota_marmota.CZRN01000018.1                           7488768  1 +  40650429 -----------------------------a
i Marmota_marmota.CZRN01000018.1                         C 0 I 38
s Megaderma_lyra.MegLyr_scaffold_4542                       145874  5 +    207569 ---TATT----------------------A
i Megaderma_lyra.MegLyr_scaffold_4542                    I 61 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             13916  5 -     74585 ---TGTA----------------------A
i Mellivora_capensis.MelCap_flattened_line_19308         I 56 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 44721  1 -    140813 -----------------------------A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79387  4 +     93471 ----ATT----------------------A
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 52 C 0
s Mico_argentatus.k141_582562                                 5882  8 +     17804 GTATATT----------------------A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6654  8 -     12984 GTATATT----------------------A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14617  8 -     26561 GTATATT----------------------A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980461  8 +  93316391 gtatctt----------------------g
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180118  5 +    200668 ---CATC----------------------A
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 39 C 0
s Microtus_ochrogaster.CM001695.1                         15959601  1 +  27267610 -----------------------------a
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360484  5 -   8254450 ---TATC----------------------A
i Miniopterus_natalensis.LDJU01000034.1                  I 39 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39385  5 -     48117 ---TATC----------------------A
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 46 C 0
s Miopithecus_ogouensis.k141_1534655                         17827  8 -     27822 gtatatc----------------------a
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4005  5 +     27589 ---TGTA----------------------A
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 54 C 0
s Mirza_zaza.k141_766280                                     48324  8 -     62432 gtatctt----------------------g
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351283  4 +    437263 ----ATT----------------------A
i Monodon_monoceros.MonMon_M_scaffold_103                I 52 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174290  5 +    366855 ---TATC----------------------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 39 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22356  4 -     82753 ----ATT----------------------A
i Moschus_moschiferus.MosMos_scaffold_13123              I 68 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14020  5 -     63510 ---TATA----------------------A
i Mungos_mungo.MunMun_flattened_line_18455               I 37 C 0
s Murina_feae.MurFea_scaffold_17764                          33210  5 +     47283 ---TATC----------------------A
i Murina_feae.MurFea_scaffold_17764                      I 39 C 0
s Mus_caroli.LT608237.1                                   35584832  1 + 120012414 -----------------------------a
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41679223  1 + 129401213 -----------------------------a
i Mus_musculus.chr8                                      C 0 I 10
s Mus_pahari.LT608297.1                                   58212847  1 +  89631738 -----------------------------a
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39486332  1 + 130317789 -----------------------------a
i Mus_spretus.CM004101.1                                 C 0 I 10
s Muscardinus_avellanarius.MusAve_scaffold_12866             79891  1 -     86153 -----------------------------c
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 53
s Mustela_putorius.JH418006.1                             14342917  5 +  14710649 ---TGTA----------------------A
i Mustela_putorius.JH418006.1                            I 56 C 0
s Myotis_brandtii.KE162005.1                               9787659  5 +  10118263 ---GGTC----------------------A
i Myotis_brandtii.KE162005.1                             I 39 C 0
s Myotis_davidii.KB100139.1                                4378045  5 +   6019432 ---TATC----------------------A
i Myotis_davidii.KB100139.1                              I 39 C 0
s Myotis_lucifugus.GL432175.1                                18289  5 -     39439 ---GATC----------------------A
i Myotis_lucifugus.GL432175.1                            I 39 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1603  5 +      3929 ---TATC----------------------A
i Myotis_myotis.MyoMyo_scaffold_185951                   I 39 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108699  1 +    130748 -T----------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 6 C 0
s Nasalis_larvatus.k141_1350636                              24192  8 +     34575 GTATATC----------------------A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464401  5 -  31847680 ---tgta----------------------a
i Neomonachus_schauinslandi.NINY01007730.1               I 52 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225456  4 -   7148211 ----att----------------------a
i Neophocaena_asiaeorientalis.KZ687982.1                 I 52 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   120327  5 -    149072 ---TATT----------------------A
i Noctilio_leporinus.NocLep_scaffold_7894                I 120 C 0
s Nomascus_annamensis.k141_1771965                           49144  8 -    132029 gtatatc----------------------a
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5240  8 -     16345 gtatatc----------------------a
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11123  8 +     22201 GTATATC----------------------A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409460  8 -  22158432 gtatatc----------------------a
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21523  8 -     54323 gtatatc----------------------a
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193792  5 +   9404916 ---TGTA----------------------A
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 47 C 0
s Ochotona_princeps.JH802162.1                             2566608  6 -   3988456 --atatc----------------------a
i Ochotona_princeps.JH802162.1                           I 5 C 0
s Odobenus_rosmarus.KB229312.1                             1447174  5 +   2017862 ---tgta----------------------a
i Odobenus_rosmarus.KB229312.1                           I 54 C 0
s Odocoileus_virginianus.KZ100018.1                         434337  4 -    630418 ----att----------------------a
i Odocoileus_virginianus.KZ100018.1                      I 70 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12325  4 +    150152 ----att----------------------a
i Okapia_johnstoni.LVCL01S0005463.1                      I 70 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    85856  1 -    140218 -----------------------------A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   103186  1 +    107918 -----------------------------A
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orcinus_orca.KB316932.1                                  8094721  4 +  10937097 ----att----------------------a
i Orcinus_orca.KB316932.1                                I 52 C 0
s Oryctolagus_cuniculus.CM000791.1                       107098823  3 - 174332312 -----tc----------------------a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        34858  5 +    559221 ---TGTA----------------------A
i Otocyon_megalotis.JAEUCK010005147.1                    I 48 C 0
s Ovis_aries.CM001607.2                                   26402314  4 -  44047080 ----att----------------------a
i Ovis_aries.CM001607.2                                  I 65 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       2833  4 +     17875 ----ATT----------------------A
i Ovis_canadensis.OviCan_scaffold_67953                  I 65 C 0
s Pan_troglodytes.CM009242.2                               1467347  8 - 189151597 gtatatc----------------------a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20057  5 -    230217 ---TATA----------------------G
i Panthera_onca.PanOnc_flattened_line_3271               I 65 C 0
s Panthera_pardus.KV860321.1                              18457379  5 -  18783137 ---tata----------------------g
i Panthera_pardus.KV860321.1                             I 65 C 0
s Panthera_tigris.KE722367.1                               3968108  5 +   8748460 ---tata----------------------g
i Panthera_tigris.KE722367.1                             I 57 C 0
s Pantholops_hodgsonii.KE114653.1                          1613760  4 +   2937107 ----att----------------------a
i Pantholops_hodgsonii.KE114653.1                        I 63 C 0
s Papio_anubis.CM001495.2                                   238760  8 - 183742232 GTATatc----------------------a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5227  8 +     21308 GTATATC----------------------A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286264  8 -  20919399 gtatatc----------------------a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  17880  8 -     27687 gtatatc----------------------a
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11016  8 +     16796 GTATATC----------------------A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17826  8 -     23640 gtatatc----------------------a
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10970  5 +     78924 ---TATA----------------------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 62 C 0
s Peromyscus_maniculatus.KI615324.1                         242850  1 +  18517816 -----------------------------A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10584  4 -     15039 ----ATT----------------------A
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 52 C 0
s Piliocolobus_badius.k141_2495623                            4646  8 +      7560 GTATATC----------------------A
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60353  8 -     63152 gtatatc----------------------a
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            42952  8 +     45295 GTATATC----------------------A
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     631  8 +      5735 GTATAtc----------------------a
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45485  5 +     46691 ---TATC----------------------A
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        I 571 C 0
s Pithecia_albicans.k141_1239476                             60832  8 +    207309 GTATATT----------------------A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          1952  8 -     25401 gtatatt----------------------a
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27667  8 +     58159 GTATATT----------------------A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         27943  8 +     63561 GTATATT----------------------A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27706  8 +     51148 GTATATT----------------------A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552701  8 -   4542175 gtatatt----------------------a
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27690  8 +     51125 GTATATT----------------------A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2666  1 -      8168 -----------------------------a
i Platanista_gangetica.PlaMin_flattened_line_167872      I 50 C 0
s Plecturocebus_bernhardi.k141_2549090                        4125  8 +     39866 GTATATT----------------------A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_89578                           3909  8 -      4004 GTATATT----------------------A
i Plecturocebus_brunneus.k141_89578                      C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38614  8 -     87950 GTATATT----------------------A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39007  8 -     88961 GTATATT----------------------A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3707  8 -     39403 GTATATT----------------------A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38660  8 +     87928 GTATATT----------------------A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3703  8 -     60166 GTATATT----------------------A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10639  8 -     67232 GTATATT----------------------A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38556  8 -     90634 GTATATT----------------------A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40023  8 +     89403 GTATATT----------------------A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   172964  8 - 189387572 gtatatc----------------------a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      187962  8 -   9816681 GTATATC----------------------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23132  8 +     69807 GTATATC----------------------A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40327  8 -     80239 gtatatc----------------------a
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7832 29 +     14086 -TTTATAATTTATATATTTTAATATGTAAC
i Procavia_capensis.ProCapCap_scaffold_121686            I 13 C 0
s Prolemur_simus.MPIZ01000396.1                            1979361  8 +   4620579 gtatctt----------------------g
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1561943  8 -   2598838 GTATCtt----------------------g
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79036  8 -     79582 GTATCTT----------------------G
i Propithecus_coronatus.k141_149744                      C 0 I 38
s Propithecus_diadema.k141_153680                              181  8 -     11706 GTATCCT----------------------G
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            3916  8 -     30655 GTATCCT----------------------G
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30245  8 +     46564 GTATCCT----------------------G
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90536  8 -     98465 GTATCTT----------------------G
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4158  8 +     35169 GTATCTT----------------------G
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            32215  1 +     52041 -----------------------------A
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47369  5 -     66298 ---Tatc----------------------a
i Pteronotus_parnellii.KE847780.1                        I 41 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4055  5 -     10349 ---TGTA----------------------A
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 55 C 0
s Pteropus_alecto.KB030862.1                               5836270  5 -  28871421 ---tatc----------------------a
i Pteropus_alecto.KB030862.1                             I 45 C 0
s Pteropus_vampyrus.KN525825.1                             3532846  5 -   4952924 ---tgtc----------------------a
i Pteropus_vampyrus.KN525825.1                           I 45 C 0
s Puma_concolor.QAVW01001104.1                            18094931  5 +  38429054 ---tata----------------------g
i Puma_concolor.QAVW01001104.1                           I 55 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51294  4 +     55069 ----ATT----------------------A
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 70 C 0
s Rattus_norvegicus.chr16                                 37011561  1 -  90668790 -----------------------------a
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2908388  5 +   3329780 ---tatc----------------------a
i Rhinolophus_sinicus.LVEH01000134.1                     I 69 C 0
s Rhinopithecus_bieti.k119_221883                            24350  8 +     27361 GTATATC----------------------A
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117709  8 + 195417433 GTATatc----------------------a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             231958  8 -   7961872 gtatatc----------------------a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70321  5 -    116970 ---TATC----------------------A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 45 C 0
s Saguinus_bicolor.k141_1125626                              16348  8 +     16959 GTATATT----------------------A
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38198  8 +     72255 GTATATT----------------------A
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            10839  8 +     11432 GTATATT----------------------A
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16214  8 -     16755 gtatatt----------------------a
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14784  8 -     15289 gtatatt----------------------a
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386780  8 - 209938924 gtatatt----------------------a
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7645  8 +     22212 GTATATT----------------------A
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16142  8 +     39756 GTATATT----------------------A
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        5903  4 +     16473 ----ATT----------------------A
i Saiga_tatarica.SaiTat_scaffold_39512                   I 63 C 0
s Sapajus_apella.ctg103                                     234331  8 +   5703754 GTATATT----------------------A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           3921  8 +     21866 GTATATT----------------------A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111862  8 +    313613 ATACATC----------------------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 73 C 0
s Semnopithecus_entellus.k141_158471                         20840  8 +     27374 GTATATC----------------------A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24355  8 +     58920 GTATATC----------------------A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           10852  8 -     45317 gtatatc----------------------a
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18509  8 -     42441 gtatatc----------------------a
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21191  8 -     29113 gtatatc----------------------a
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24263  8 -     48123 gtatatc----------------------a
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    44137  1 +     77746 -----------------------------A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854043  8 -   1910179 GTAGATC----------------------A
i Solenodon_paradoxus.SolPar_flattened_line_126          I 62 C 0
s Spermophilus_dauricus.KZ294078.1                         1854982  1 +   3870691 -----------------------------a
i Spermophilus_dauricus.KZ294078.1                       C 0 I 34
s Spilogale_gracilis.SpiGra_flattened_line_13525              1921  5 -     97271 ---TGTA----------------------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 47 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120612  5 +    196729 ---TATA----------------------A
i Suricata_suricatta.SurSur_flattened_line_6629          I 33 C 0
s Sus_scrofa.CM000828.4                                    6639376  4 +  69701581 ----att----------------------a
i Sus_scrofa.CM000828.4                                  I 58 C 0
s Symphalangus_syndactylus.tarseq_199                       386436  8 +   1523678 GTATATC----------------------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                10962  5 +     22964 ---TCTC----------------------A
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 43 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                23656  1 -     25844 -T----------------------------
i Tamandua_tetradactyla.TamTet_scaffold_67439            I 6 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187099  8 +    199430 ATATATG----------------------A
i Tapirus_indicus.TapInd_scaffold_7432                   I 68 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101054  8 -    539355 ATATATG----------------------A
i Tapirus_terrestris.TapTer_scaffold_755                 I 64 C 0
s Tarsius_lariang.k141_1780720                                2804  8 +      6850 GTATATC----------------------A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                2886  8 +     20590 GTATATC----------------------A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348745  8 - 186847797 GTATatc----------------------a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475156  5 -    610378 ---TATC----------------------A
i Tonatia_saurophila.TonSau_scaffold_294                 I 39 C 0
s Trachypithecus_auratus.k141_1189070                        16404  8 +     26378 GTGTATC----------------------A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29085  8 -     78344 gtatatc----------------------a
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15725  8 +     25722 GTGTATC----------------------A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      23948  8 -     62838 gtatatc----------------------a
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24067  8 +     46913 GTATATC----------------------A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          4875  8 -     28527 gtatatc----------------------a
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      25887  8 -     64340 gtatatc----------------------a
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          23924  8 -     63452 gtatatc----------------------a
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5366  8 +     22490 GTATATC----------------------A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         2986  8 +      4141 GTATATC----------------------A
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5792  8 -     13050 gtatatc----------------------a
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251029  8 -   6242583 gtatatc----------------------a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56761  8 +     59866 GTATATC----------------------A
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478481 13 -  10818551 -tttata----------------atatatt
i Trichechus_manatus.JH594705.1                          I 6 C 0
s Tupaia_chinensis.KB320699.1                              1825388  8 -   4065304 atatatc----------------------a
i Tupaia_chinensis.KB320699.1                            I 383 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2783  8 -     70247 ATATATC----------------------A
i Tupaia_tana.TupTan_flattened_line_394                  I 377 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359460  4 -  33153633 ----Att----------------------a
i Tursiops_truncatus.MRVK01000835.1                      I 52 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103274  8 -    105689 GTACAAC----------------------A
i Uropsilus_gracilis.UroGra_scaffold_7153                I 62 C 0
s Ursus_maritimus.KK499267.1                                177147  5 +   5085361 ---tgta----------------------a
i Ursus_maritimus.KK499267.1                             I 57 I 6
s Varecia_rubra.k141_787544                                  20991  8 -     30710 GTATCTT----------------------G
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              19899  8 -    147434 gtatctt----------------------g
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74543  5 +   5488506 ---TGTC----------------------A
i Vicugna_pacos.KN270157.1                               I 56 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100540  3 -    112863 -----TA----------------------A
i Vulpes_lagopus.VulLag_flattened_line_12041             I 45 C 0
s Xerus_inauris.XerIna_scaffold_2302                        161959  1 -    224448 -----------------------------A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 36
s Zalophus_californianus.ZalCal_flattened_line_17732         24393  5 -     86975 ---TGTA----------------------A
i Zalophus_californianus.ZalCal_flattened_line_17732     I 58 C 0
s Zapus_hudsonius.ZapHud_scaffold_95421                      12730  1 -     12806 -----------------------------G
i Zapus_hudsonius.ZapHud_scaffold_95421                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2660542            111  4 +       358 ----ATT----------------------A
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      I 52 C 0
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542  0 +     83186 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  660201  0 -   1390856 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        115  9 +     36723 TA-------TT---------------T-----ACA------------T
s Acomys_cahirinus.AcoCah_scaffold_21377                     17724 22 +     63021 AA-------CATTCT-CT-TTCCACAT-----ACA------------T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    10085 19 -     61208 TATACAGTCTT--C---------AGGT-----ATA-------------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 5
s Allenopithecus_nigroviridis.k141_3755588                   43425  9 +     53615 TA-------TT---------------T-----ACA------------T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39240  9 +     44087 TA-------TT---------------T-----ACA------------T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68160  9 -     84148 CA-------TT---------------T-----ACA------------T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40383  9 -     78289 CA-------TT---------------T-----ACA------------T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39831  9 +     55831 CA-------TT---------------T-----ACA------------T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38272  9 -     64179 CA-------TT---------------T-----ACA------------T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           19915  9 -     24835 CA-------TT---------------T-----ACA------------T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             36898  9 +     45454 CA-------TT---------------T-----ACA------------T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42597  9 +     70886 CA-------TT---------------T-----ACA------------T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4724  9 +     30854 CA-------TT---------------T-----ACA------------T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             28863  9 +     42133 CA-------TT---------------T-----ACA------------T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583383  3 +   2318259 tt-------t--------------------------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172116  3 -    412891 CA-------T--------------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48479  3 -     68529 TT-------T--------------------------------------
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46668  9 -     65372 TA-------TT---------------T-----ACA------------T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40416  9 +     43593 TA-------TT---------------T-----ACA------------T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668426  9 +   5030052 ta-------tt---------------t-----aca------------t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20070  9 -     23494 TA-------TT---------------T-----ACA------------T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5204  9 +      8415 TA-------TT---------------T-----ACA------------T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5641  8 -     32367 -T-------CA---------------T-----ATA------------T
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 27 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_859459                   77  3 -       293 CA-------T--------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_859459            C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270660  9 +  21539123 TA-------TT---------------T-----ACA------------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6831  9 +     48076 TA-------TT---------------T-----ACA------------T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   1966  9 -     28759 TA-------TT---------------T-----ACA------------T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29517  9 +     44353 TA-------TT---------------T-----ACA------------T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              44892  9 -     71267 TA-------TT---------------T-----ACA------------T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                18948  9 -     33135 TA-------TT---------------T-----ACA------------T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2086  9 +     11645 CA-------TT---------------T-----ACA------------T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2088  9 -     19611 CA-------TT---------------T-----ACA------------T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955211  3 -  23207421 ta-------t--------------------------------------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2419  3 -      4711 ta-------t--------------------------------------
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84377  3 +    124022 TT-------T--------------------------------------
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     19908  3 +    288883 tt-------t--------------------------------------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354295  3 +  48749331 tt-------t--------------------------------------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      752863  3 +   1948126 tt-------t--------------------------------------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543002  3 -  45695690 tt-------t--------------------------------------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528026  3 -   4408762 tt-------t--------------------------------------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   3851  9 +     28062 TA-------TT---------------T-----ACA------------T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39146  9 -     91139 TA-------TT---------------T-----ACA------------T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16671  9 +     95584 TA-------TT---------------T-----ACA------------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16584  9 +    119600 TA-------TT---------------T-----ACA------------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5782  6 -     13885 TA-------TT---------------T-----A---------------
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14467  6 +     17162 TA-------TT---------------T-----A---------------
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449423  6 + 189096842 TA-------TT---------------T-----A---------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15716  6 -     18408 TA-------TT---------------T-----A---------------
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629209  3 +  17673402 Ta-------t--------------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663495  3 +   7040546 Ta-------t--------------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207155  3 +   1652518 Ta-------t--------------------------------------
i Camelus_ferus.KB017975.1                               C 0 C 0
s Capra_aegagrus.CM003241.1                               27407094  3 -  46296322 tt-------t--------------------------------------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589367  3 +  44709034 tt-------t--------------------------------------
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265207 11 +    496798 aA-------TCTT-------------T-----ACA------------T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                 14  3 +      5315 CA-------T--------------------------------------
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    18016  8 -     39886 CT-------A----------------T-----ATA------------T
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 14
s Catagonus_wagneri.CatWag_scaffold_2839                     74910  3 -    217609 TA-------T--------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_748279                           1056  6 -      1068 TA-------TT---------------T-----A---------------
i Cebuella_niveiventris.k141_748279                      C 0 N 0
s Cebuella_pygmaea.k141_145798                               38887  6 +     53515 TA-------TT---------------T-----A---------------
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367115  9 -  26074798 TA-------TT---------------T-----GCA------------T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4004  9 -     34880 TA-------TT---------------T-----GCA------------T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63099  9 -     89041 TA-------TT---------------T-----GCA------------T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13478 11 -     50533 AA-------TCTT-------------T-----ACA------------T
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15487857  3 -  27778364 ca-------t--------------------------------------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14690  3 +     27315 CA-------T--------------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136585  9 -   4669795 ta-------tt---------------t-----aca------------t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40326  9 +     47900 TA-------TT---------------T-----ACA------------T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40158  9 -     44860 ta-------tt---------------t-----aca------------t
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40140  9 -    148725 ta-------tt---------------t-----aca------------t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23126  9 -     40656 ta-------tt---------------t-----aca------------t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3134  9 +     20796 TA-------TT---------------T-----ACA------------T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7389  9 -     17524 ta-------tt---------------t-----aca------------t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23081  9 -     34525 ta-------tt---------------t-----aca------------t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7801  9 -     25376 ta-------tt---------------t-----aca------------t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360278  9 -  39242232 TA-------TT---------------T-----ACA------------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266106  9 +  21565898 TA-------TT---------------T-----ACA------------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27552  9 -     45857 ta-------tt---------------t-----aca------------t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23343  9 -     32606 TA-------TT---------------T-----ACA------------T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      26992  9 +     27662 TA-------TT---------------T-----ACA------------T
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21042  9 +     70610 TA-------TT---------------T-----ACA------------T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         17907  9 +     36323 TA-------TT---------------T-----ACA------------T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             26508  9 -     33796 CA-------TT---------------T-----ACA------------T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              702  9 -     15404 CA-------TT---------------T-----ACA------------T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             4949  9 -     32913 TA-------TT---------------T-----ACA------------T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15362  9 -     40346 TA-------TT---------------T-----ACA------------T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15626  9 +    216457 TA-------TT---------------T-----ACA------------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15404  9 +     39636 TA-------TT---------------T-----ACA------------T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16453  9 -     17061 ta-------tt---------------t-----acg------------t
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38491  9 -    112038 TA-------TT---------------T-----ACA------------T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4063  9 +     34062 TA-------TT---------------T-----ACA------------T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338805  9 +  18827391 TA-------TT---------------T-----ACA------------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5409  9 -     44032 ta-------tt---------------t-----aca------------t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300131  9 - 135778131 ta-------tt---------------t-----aca------------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404662  9 -   2368649 ta-------tt---------------t-----aca------------t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373852  9 - 200372422 ta-------tt---------------t-----aca------------t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4546  9 -      6605 TA-------TT---------------T-----ACA------------T
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802788  3 +  53390261 ca-------t--------------------------------------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8376  3 +     10921 CT-------T--------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 38364 22 -     83289 CG-------TGTTCT-CT-CCCCACGT-----ATG------------T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    640257  9 -   1526836 CA-------TT---------------A-----GTG------------A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288525  9 +  12879189 CA-------TT---------------T-----ACA------------T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623544  3 -  35494412 ta-------t--------------------------------------
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134666  3 -    198055 CA-------T--------------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               1732  3 +     19438 ta-------t--------------------------------------
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237771  3 -    607251 tt-------t--------------------------------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          26186 22 +    110024 aa-------tattct-ct-ctccACAT-----GTG------------T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 3
s Ellobius_talpinus.LOJH01026522.1                            8104 22 +     18970 aa-------tattct-ct-ctcCACAT-----GTG------------t
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 3
s Eptesicus_fuscus.JH977646.1                             12573302  3 +  14770903 CT-------T--------------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037334  3 -   4378816 CG-------T--------------------------------------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371267  3 +  39960074 cg-------t--------------------------------------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408053  3 -    498745 cg-------t--------------------------------------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258361  9 +  21539334 CA-------TT---------------T-----ACA------------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63092  3 -    133382 Ta-------t--------------------------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3306  3 +      7672 Ta-------t--------------------------------------
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11486  9 -     24895 CA-------TT---------------T-----Aca------------t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39198  9 -     70999 CA-------TT---------------T-----Aca------------t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83158  9 +    112731 CA-------TT---------------T-----Aca------------t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39730  9 +     68309 CA-------TT---------------T-----Aca------------t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50055  9 -     65740 ca-------tt---------------t-----aca------------t
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20685  9 -     75513 ca-------tt---------------t-----aca------------t
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 44878  9 -     97555 ca-------tt---------------t-----aca------------t
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1605  9 +     30972 CA-------TT---------------T-----ACA------------T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39328  9 -     52037 CA-------TT---------------T-----Aca------------t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55729  9 -    111500 CA-------TT---------------T-----Aca------------t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               2752  9 +      5976 TA-------AT---------------T-----ACA------------C
i Galeopterus_variegatus.GalVar_scaffold_132127          n 9 I 97
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89446  3 -     95226 tt-------t--------------------------------------
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31301  9 -     36801 cc-------tt---------------t-----atg------------t
i Glis_glis.GliGli_scaffold_33859                        I 60 C 0
s Gorilla_beringei.k141_3358147                                473  9 -      8343 TA-------TT---------------T-----ACA------------T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 66024  9 +  33314783 ta-------tt---------------t-----aca------------t
i Gorilla_gorilla.LT578336.1                             n 9 I 45
s Graphiurus_murinus.GraMur_scaffold_90206                   10899  9 +     11903 CC-------TT---------------T-----ATG------------T
i Graphiurus_murinus.GraMur_scaffold_90206               I 51 C 0
s Hapalemur_alaotrensis.k141_330369                          11419  9 -     40692 ca-------tt---------------t-----aca------------t
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32821  9 +     49394 CA-------TT---------------T-----Aca------------t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57689  9 -     66874 CA-------TT---------------T-----Aca------------t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6566  9 -     42923 ca-------tt---------------t-----aca------------t
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13562  9 -     53142 ca-------tt---------------t-----aca------------t
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7198  3 +     48891 TT-------T--------------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10704  3 +     12639 TA-------C--------------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5790  3 -     36432 Ta-------t--------------------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545623  3 -   1711038 ca-------t--------------------------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               44914  3 +     49977 ca-------t--------------------------------------
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    137867  9 -    630532 TA-------TT---------------T-----ACA------------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                                895  9 +     12352 TA-------TT---------------T-----ACA------------T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8078  9 +     55766 TA-------TT---------------T-----ACA------------T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047422  9 + 191637585 TA-------TT---------------T-----ACA------------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796754  9 +  11177569 TA-------TT---------------T-----ACA------------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2573 13 -    135385 -C-------TC---------------TGTATCACA------------T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374707  8 +   7955117 -a-------gt---------------t-----ata------------t
i Ictidomys_tridecemlineatus.JH393364.1                  I 38 C 0
s Indri_indri.k141_2435083                                     766  9 +      1070 CA-------TT---------------T-----ACA------------T
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1326  3 -     16823 Ta-------t--------------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1232512 20 +   9596543 TACACAGTCTT--C---------AGgt-----atg------------a
i Jaculus_jaculus.JH725527.1                             C 0 I 5
s Kogia_breviceps.KogBre_flattened_line_3970                 63826  3 -     97402 TA-------T--------------------------------------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39212  9 +    110728 TA-------TT---------------T-----ACA------------T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58804  3 -     65777 CA-------T--------------------------------------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756211  9 +  30322482 CA-------TT---------------T-----Aca------------t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        4864  9 -      5330 ta-------tt---------------t-----acg------------t
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16301  9 -     16762 TA-------TT---------------T-----ACG------------T
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16600  9 -     17065 ta-------tt---------------t-----acg------------t
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6125  9 -     11567 ta-------tt---------------t-----acg------------t
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7506  9 -     12945 ta-------tt---------------t-----acg------------t
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          4865  9 +     29618 CA-------TT---------------T-----ACA------------T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4864  9 +     31569 CA-------TT---------------T-----ACA------------T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          4872  9 +     24756 CA-------TT---------------T-----ACA------------T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       4869  9 +     16388 CA-------TT---------------T-----ACA------------T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lipotes_vexillifer.KE559953.1                             332849  3 +    662738 ta-------t--------------------------------------
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328541  9 -   1826925 ta-------tt---------------t-----aca------------t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39075862  3 +  43346337 ta-------c--------------------------------------
i Loxodonta_africana.GL010049.1                          I 4 C 0
s Macaca_arctoides.k141_1757516                              40822  9 -     61512 ta-------tt---------------t-----aca------------t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368450  9 -  60120075 ta-------tt---------------t-----aca------------t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20769  9 +     30207 TG-------TT---------------T-----ACA------------T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           17872  9 -     24934 tg-------tt---------------t-----aca------------t
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20656  9 +     30527 TA-------TT---------------T-----ACA------------T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31845  9 -     50087 ta-------tt---------------t-----aca------------t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41583  9 +     51645 TA-------TT---------------T-----ACA------------T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410157  9 - 187317192 tg-------tt---------------t-----aca------------t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395040  9 +  25927173 ta-------tt---------------t-----aca------------t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44172  9 -     62418 ta-------tt---------------t-----aca------------t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                20859  9 +     24253 TA-------TT---------------T-----ACA------------T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40616  9 +     59329 TA-------TT---------------T-----ACA------------T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266448  9 +    668171 TA-------TT---------------T-----ACA------------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17794  9 +     21031 TA-------TT---------------T-----ACA------------T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31526  9 +     33478 TA-------TT---------------T-----ACA------------T
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218808  3 -    270270 TA-------T--------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        317924  9 +  24302211 TA-------TT---------------T-----ACA------------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352756  9 -    752769 ta-------tt---------------t-----aca------------t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669552  3 -    737560 AG-------T--------------------------------------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             216845  3 +    317179 AG-------T--------------------------------------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7488807  8 +  40650429 -a-------gt---------------t-----ata------------t
i Marmota_marmota.CZRN01000018.1                         I 38 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       145879  3 +    207569 CA-------T--------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 44722 22 -    140813 AA-------CATTCT-CT-CTCCACAC-----ATG------------T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79391  3 +     93471 Ta-------t--------------------------------------
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 5890  6 +     17804 TA-------TT---------------T-----A---------------
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6662  6 -     12984 TA-------TT---------------T-----A---------------
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14625  6 -     26561 TA-------TT---------------T-----A---------------
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980469  9 +  93316391 ca-------tt---------------t-----aca------------t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180123  3 +    200668 CA-------T--------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15959602 22 +  27267610 aa-------tattat-tt-ctccaCAT-----GTG------------t
i Microtus_ochrogaster.CM001695.1                        C 0 I 3
s Miniopterus_natalensis.LDJU01000034.1                    6360489  3 -   8254450 CA-------T--------------------------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39390  3 -     48117 CA-------T--------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         17835  9 -     27822 ta-------tt---------------t-----aca------------t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     48332  9 -     62432 ca-------tt---------------t-----aca------------t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351287  3 +    437263 TA-------T--------------------------------------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174295  3 +    366855 CA-------T--------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22360  2 -     82753 TT----------------------------------------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          33215  3 +     47283 CT-------T--------------------------------------
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35584833 22 + 120012414 aa-------tattct-ct-ttccacat-----atg------------t
i Mus_caroli.LT608237.1                                  C 0 I 1
s Mus_musculus.chr8                                       41679234  3 + 129401213 ---------------------------------cG------------T
i Mus_musculus.chr8                                      I 10 I 1
s Mus_pahari.LT608297.1                                   58212848 22 +  89631738 aa-------tattct-ct-tccCACAC-----ACG------------T
i Mus_pahari.LT608297.1                                  C 0 I 1
s Mus_spretus.CM004101.1                                  39486343  3 + 130317789 ---------------------------------cg------------t
i Mus_spretus.CM004101.1                                 I 10 I 1
s Muscardinus_avellanarius.MusAve_scaffold_12866             79945  9 -     86153 ct-------tg---------------t-----atg------------t
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 53 C 0
s Myotis_brandtii.KE162005.1                               9787664  3 +  10118263 CT-------T--------------------------------------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378050  3 +   6019432 CC-------T--------------------------------------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18294  3 -     39439 CT-------T--------------------------------------
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1608  3 +      3929 CC-------T--------------------------------------
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Nasalis_larvatus.k141_1350636                              24200  9 +     34575 TA-------TT---------------T-----ACA------------T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225460  3 -   7148211 ta-------t--------------------------------------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   120332  3 -    149072 CA-------C--------------------------------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49152  9 -    132029 ta-------tt---------------t-----aca------------t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5248  9 -     16345 ta-------tt---------------t-----aca------------t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11131  9 +     22201 TA-------TT---------------T-----ACA------------T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409468  9 -  22158432 ta-------tt---------------t-----aca------------t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21531  9 -     54323 ta-------tt---------------t-----aca------------t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Ochotona_princeps.JH802162.1                             2566614  9 -   3988456 ca-------tt---------------t-----atg------------t
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434341  3 -    630418 tt-------t--------------------------------------
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12329  3 +    150152 tt-------t--------------------------------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    85857 22 -    140218 AA-------TATTTT-CTCTTC-ACAT-----GTG------------T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_2487                   103187 22 +    107918 AG-------TATTCT-CT-CTCCACCT-----ATG------------T
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orcinus_orca.KB316932.1                                  8094725  3 +  10937097 ta-------t--------------------------------------
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107098826  5 - 174332312 ca-------tt---------------t---------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Ovis_aries.CM001607.2                                   26402318  3 -  44047080 tt-------t--------------------------------------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       2837  3 +     17875 TT-------T--------------------------------------
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467355  9 - 189151597 ta-------tt---------------t-----aca------------t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1613764  3 +   2937107 tt-------t--------------------------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   238768  9 - 183742232 ta-------tt---------------t-----aca------------t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5235  9 +     21308 TA-------TT---------------T-----ACA------------T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286272  9 -  20919399 ta-------tt---------------t-----aca------------t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  17888  9 -     27687 ta-------tt---------------t-----aca------------t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11024  9 +     16796 TA-------TT---------------T-----ACA------------T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17834  9 -     23640 ta-------tt---------------t-----aca------------t
i Papio_ursinus.k141_2278143                             C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         242851 22 +  18517816 AA-------CATTCT-CT-CCCCACCT-----ATG------------T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10588  3 -     15039 TA-------T--------------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4654  9 +      7560 TA-------TT---------------T-----ACA------------T
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60361  9 -     63152 ta-------tt---------------t-----aca------------t
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            42960  9 +     45295 TA-------TT---------------T-----ACA------------T
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     639  9 +      5735 ta-------tt---------------t-----aca------------t
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45490  3 +     46691 CT-------T--------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             60840  9 +    207309 TA-------TT---------------T-----ACA------------T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          1960  9 -     25401 ta-------tt---------------t-----acg------------t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27675  9 +     58159 TA-------TT---------------T-----Aca------------t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         27951  9 +     63561 TA-------TT---------------T-----ACA------------T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27714  9 +     51148 TA-------TT---------------T-----Aca------------t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552709  9 -   4542175 ta-------tt---------------t-----acg------------t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27698  9 +     51125 TA-------TT---------------T-----Aca------------t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2667  3 -      8168 ta-------t--------------------------------------
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4133  9 +     39866 TA-------TT---------------T-----ACA------------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_89578                           3917  9 -      4004 TA-------TT---------------T-----ACA------------T
i Plecturocebus_brunneus.k141_89578                      C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38622  9 -     87950 TA-------TT---------------T-----ACA------------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39015  9 -     88961 TA-------TT---------------T-----ACA------------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3715  9 -     39403 TA-------TT---------------T-----ACA------------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38668  9 +     87928 TA-------TT---------------T-----ACA------------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3711  9 -     60166 TA-------TT---------------T-----ACA------------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10647  9 -     67232 TA-------TT---------------T-----ACA------------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38564  9 -     90634 TA-------TT---------------T-----ACA------------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40031  9 +     89403 TA-------TT---------------T-----ACA------------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   172972  9 - 189387572 ta-------tt---------------t-----aca------------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      187970  9 -   9816681 TA-------TT---------------T-----ACA------------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23140  9 +     69807 TA-------TT---------------T-----ACA------------T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40335  9 -     80239 ta-------tt---------------t-----aca------------t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7861  3 +     14086 TA-------C--------------------------------------
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979369  9 +   4620579 ca-------tt---------------t-----aca------------t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1561951  9 -   2598838 ca-------tt---------------t-----aca------------t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_162402                            549  9 -      1093 CA-------TT---------------T-----Aca------------t
i Propithecus_coronatus.k141_162402                      n 38 C 0
s Propithecus_diadema.k141_153680                              189  9 -     11706 CA-------TT---------------T-----ACA------------T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            3924  9 -     30655 CA-------TT---------------T-----ACA------------T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30253  9 +     46564 CA-------TT---------------T-----ACA------------T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90544  9 -     98465 CA-------TT---------------T-----Aca------------t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4166  9 +     35169 CA-------TT---------------T-----Aca------------t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            32216 22 +     52041 AA-------CATTCT-CT-CTCCACAC-----ATG------------T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47374  3 -     66298 ca-------t--------------------------------------
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                               5836275  3 -  28871421 ta-------t--------------------------------------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3532851  3 -   4952924 ta-------t--------------------------------------
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51298  3 +     55069 TT-------T--------------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37011562 22 -  90668790 aa-------tattct-tt-ctccaCAT-----AAG------------T
i Rattus_norvegicus.chr16                                C 0 I 2
s Rhinolophus_sinicus.LVEH01000134.1                       2908393  3 +   3329780 ca-------t--------------------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24358  9 +     27361 TA-------TT---------------T-----ACA------------T
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117717  9 + 195417433 ta-------tt---------------t-----aca------------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             231966  9 -   7961872 ta-------tt---------------t-----aca------------t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70326  3 -    116970 TA-------T--------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1125626                              16356  9 +     16959 TA-------TT---------------T-----ACG------------T
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38206  9 +     72255 TA-------TT---------------T-----ATG------------T
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            10847  9 +     11432 TA-------TT---------------T-----ACG------------T
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16222  9 -     16755 ta-------tt---------------t-----acg------------t
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14792  9 -     15289 ta-------tt---------------t-----acg------------t
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386788  9 - 209938924 ta-------tt---------------t-----acg------------t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7653  9 +     22212 TA-------TT---------------T-----ACG------------T
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16150  9 +     39756 TA-------TT---------------T-----ATG------------T
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        5907  3 +     16473 TT-------T--------------------------------------
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234339  9 +   5703754 TA-------TT---------------T-----GCA------------T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           3929  9 +     21866 TA-------TT---------------T-----GCA------------T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111870  3 +    313613 CA-------T--------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         20848  9 +     27374 TA-------TT---------------T-----ACA------------T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24363  9 +     58920 TA-------TT---------------T-----ACA------------T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           10860  9 -     45317 ta-------tt---------------t-----aca------------t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18517  9 -     42441 ta-------tt---------------t-----aca------------t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21199  9 -     29113 ta-------tt---------------t-----aca------------t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24271  9 -     48123 ta-------tt---------------t-----aca------------t
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    44138 22 +     77746 AA-------TACTCTTCT-TTC-ACAT-----CTG------------T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_126            1854051  3 -   1910179 CA-------T--------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855017  8 +   3870691 -a-------gt---------------t-----ata------------t
i Spermophilus_dauricus.KZ294078.1                       I 34 C 0
s Sus_scrofa.CM000828.4                                    6639380  3 +  69701581 ta-------t--------------------------------------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386444  9 +   1523678 TA-------TT---------------T-----ACA------------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                10967  3 +     22964 CA-------T--------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187107  3 +    199430 ca-------t--------------------------------------
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101062  3 -    539355 CA-------T--------------------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                2812  9 +      6850 AA-------TC---------------T-----AAA------------T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                2894  9 +     20590 AA-------TC---------------T-----AAA------------T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348753  9 - 186847797 ta-------tt---------------t-----aca------------t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475161  3 -    610378 CA-------T--------------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16412  9 +     26378 TA-------TT---------------T-----ACA------------T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29093  9 -     78344 ta-------tt---------------t-----aca------------t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15733  9 +     25722 TA-------TT---------------T-----ACA------------T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      23956  9 -     62838 ta-------tt---------------t-----aca------------t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24075  9 +     46913 TA-------TT---------------T-----ACA------------T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          4883  9 -     28527 ta-------tt---------------t-----aca------------t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      25895  9 -     64340 ta-------tt---------------t-----aca------------t
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          23932  9 -     63452 ta-------tt---------------t-----aca------------t
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5374  9 +     22490 TA-------TT---------------T-----ACA------------T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         2994  9 +      4141 TA-------TT---------------T-----ACA------------T
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5800  9 -     13050 ta-------tt---------------t-----aca------------t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251037  9 -   6242583 ta-------tt---------------t-----aca------------t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56769  9 +     59866 TA-------TT---------------T-----ACA------------T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478494  3 -  10818551 ta-------t--------------------------------------
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1825396 21 -   4065304 ca-------tt---------------t-----atacttctatttacat
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2791 21 -     70247 CA-------TT---------------T-----ACACTTCTATTTACAT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359464  3 -  33153633 ta-------t--------------------------------------
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103282  3 -    105689 TT-------T--------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Varecia_rubra.k141_787544                                  20999  9 -     30710 CA-------TT---------------T-----Aca------------t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              19907  9 -    147434 ca-------tt---------------t-----aca------------t
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74548  3 +   5488506 Ta-------t--------------------------------------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        161996  8 -    224448 -t-------aT---------------T-----TTA------------T
i Xerus_inauris.XerIna_scaffold_2302                     I 36 C 0
s Zapus_hudsonius.ZapHud_scaffold_95421                      12731 20 -     12806 TACACAGTCTT--C---------AGGt-----ata------------t
i Zapus_hudsonius.ZapHud_scaffold_95421                  C 0 I 5
s Ziphius_cavirostris.ZipCav_flattened_line_2660542            115  3 +       358 Ta-------t--------------------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      C 0 C 0
e Zalophus_californianus.ZalCal_flattened_line_17732         24398  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                100543  0 -    112863 C
e Ursus_maritimus.KK499267.1                                177152  6 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              1926  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_59017          4060  0 -     10349 C
e Otocyon_megalotis.JAEUCK010005147.1                        34863  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1447179  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                193797  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11464406  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14342922  0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         4010  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             13921  0 -     74585 C
e Lycaon_pictus.CM007581.1                                41610181  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        808994  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24905909  0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45102596  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41611026  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          217901  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     4540  0 -     23171 C
e CanFam4.chr16                                           42500910  0 +  60362399 C
e Ailurus_fulgens.LNAC01001112.1                            211355  0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20410495  0 +  29979442 C
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tamandua_tetradactyla.TamTet_scaffold_67439                23657  0 -     25844 C
e Suricata_suricatta.SurSur_flattened_line_6629             120617  0 +    196729 C
e Puma_concolor.QAVW01001104.1                            18094936  0 +  38429054 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10975  0 +     78924 C
e Panthera_tigris.KE722367.1                               3968113  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18457384  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   20062  0 -    230217 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108700  0 +    130748 C
e Mungos_mungo.MunMun_flattened_line_18455                   14025  0 -     63510 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542  0 +     83186 C
e Helogale_parvula.HelPar_flattened_line_2585                26248  0 -    327341 C
e Felis_nigripes.FelNig_flattened_line_31944                 23470  0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185112122  0 - 205367284 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  660201  0 -   1390856 C
e Cryptoprocta_ferox.CryFer_flattened_line_24933             45323  0 -     47254 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Acinonyx_jubatus.LLWD01001279.1                           808681  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                        124 1 +     36723 T
s Allactaga_bullata.AllBul_scaffold_20030                    10109 1 -     61208 T
i Allactaga_bullata.AllBul_scaffold_20030                I 5 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43434 1 +     53615 T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39249 1 +     44087 T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68169 1 -     84148 T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40392 1 -     78289 T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39840 1 +     55831 T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38281 1 -     64179 T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           19924 1 -     24835 T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             36907 1 +     45454 T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42606 1 +     70886 T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4733 1 +     30854 T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             28872 1 +     42133 T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583386 1 +   2318259 t
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172119 1 -    412891 T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48482 1 -     68529 T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46677 1 -     65372 T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40425 1 +     43593 T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668435 1 +   5030052 t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20079 1 -     23494 T
i Aotus_trivirgatus.k141_192090                          C 0 I 13
s Aotus_vociferans.k141_944972                                5213 1 +      8415 T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5649 1 -     32367 T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 4
s Artibeus_jamaicensis.ArtJam_scaffold_859459                   80 1 -       293 T
i Artibeus_jamaicensis.ArtJam_scaffold_859459            C 0 I 31
s Ateles_geoffroyi_b.tarseq_1536                               270669 1 +  21539123 T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6840 1 +     48076 T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   1975 1 -     28759 T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29526 1 +     44353 T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              44901 1 -     71267 T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                18957 1 -     33135 T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2095 1 +     11645 T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2097 1 -     19611 T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955214 1 -  23207421 t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2422 1 -      4711 t
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84380 1 +    124022 T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     19911 1 +    288883 t
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354298 1 +  48749331 t
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      752866 1 +   1948126 t
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543005 1 -  45695690 t
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528029 1 -   4408762 t
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   3860 1 +     28062 T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39155 1 -     91139 T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16680 1 +     95584 T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16593 1 +    119600 T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629212 1 +  17673402 t
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663498 1 +   7040546 t
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207158 1 +   1652518 t
i Camelus_ferus.KB017975.1                               C 0 C 0
s Capra_aegagrus.CM003241.1                               27407097 1 -  46296322 t
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589370 1 +  44709034 t
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265218 1 +    496798 T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                 17 1 +      5315 T
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    18038 1 -     39886 T
i Castor_canadensis.CasCan_scaffold_39952                I 14 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     74913 1 -    217609 T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebus_albifrons.Contig27                                  367124 1 -  26074798 T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4013 1 -     34880 T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63108 1 -     89041 T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13489 1 -     50533 T
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15487860 1 -  27778364 t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14693 1 +     27315 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136594 1 -   4669795 t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40335 1 +     47900 T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40167 1 -     44860 t
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40149 1 -    148725 t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23135 1 -     40656 t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3143 1 +     20796 T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7398 1 -     17524 t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23090 1 -     34525 t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7810 1 -     25376 t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360287 1 -  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266115 1 +  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27561 1 -     45857 t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23352 1 -     32606 T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27001 1 +     27662 T
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21051 1 +     70610 T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         17916 1 +     36323 T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             26517 1 -     33796 T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              711 1 -     15404 G
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             4958 1 -     32913 T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15371 1 -     40346 T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15635 1 +    216457 T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15413 1 +     39636 T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16462 1 -     17061 t
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38500 1 -    112038 T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4072 1 +     34062 T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338814 1 +  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5418 1 -     44032 t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300140 1 - 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404671 1 -   2368649 t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373861 1 - 200372422 t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4555 1 -      6605 T
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802791 1 +  53390261 t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8379 1 +     10921 T
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    640266 1 -   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288534 1 +  12879189 T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623547 1 -  35494412 t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134669 1 -    198055 T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               1735 1 +     19438 t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237774 1 -    607251 t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12573305 1 +  14770903 T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037337 1 -   4378816 T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371270 1 +  39960074 t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408056 1 -    498745 t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258370 1 +  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63095 1 -    133382 t
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3309 1 +      7672 t
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11495 1 -     24895 t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39207 1 -     70999 t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83167 1 +    112731 t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39739 1 +     68309 t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50064 1 -     65740 t
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20694 1 -     75513 t
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 44887 1 -     97555 t
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1614 1 +     30972 T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39337 1 -     52037 t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55738 1 -    111500 t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14663 1 +     18121 T
i Galeopterus_variegatus.GalVar_scaffold_74466           I 9 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89449 1 -     95226 t
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31310 1 -     36801 t
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                                482 1 -      8343 T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                249976 1 - 186649187 t
i Gorilla_gorilla.LT578341.1                             I 9 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   10908 1 +     11903 T
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11428 1 -     40692 t
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32830 1 +     49394 t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57698 1 -     66874 t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6575 1 -     42923 t
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13571 1 -     53142 t
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7201 1 +     48891 T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10707 1 +     12639 A
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5793 1 -     36432 t
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545626 1 -   1711038 c
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               44917 1 +     49977 t
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    137876 1 -    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                                904 1 +     12352 T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8087 1 +     55766 T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047431 1 + 191637585 T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796763 1 +  11177569 T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2586 1 -    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374715 1 +   7955117 t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2435083                                     775 1 +      1070 T
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1329 1 -     16823 t
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1232537 1 +   9596543 t
i Jaculus_jaculus.JH725527.1                             I 5 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 63829 1 -     97402 T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39221 1 +    110728 T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58807 1 -     65777 T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756220 1 +  30322482 t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        4873 1 -      5330 t
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16310 1 -     16762 T
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16609 1 -     17065 t
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6134 1 -     11567 t
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7515 1 -     12945 t
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          4874 1 +     29618 T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4873 1 +     31569 T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          4881 1 +     24756 T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       4878 1 +     16388 T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lipotes_vexillifer.KE559953.1                             332852 1 +    662738 t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328550 1 -   1826925 t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39075865 1 +  43346337 a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Macaca_arctoides.k141_1757516                              40831 1 -     61512 t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368459 1 -  60120075 t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20778 1 +     30207 T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           17881 1 -     24934 t
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20665 1 +     30527 T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31854 1 -     50087 t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41592 1 +     51645 T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410166 1 - 187317192 t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395049 1 +  25927173 t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44181 1 -     62418 t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                20868 1 +     24253 T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40625 1 +     59329 T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266457 1 +    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17803 1 +     21031 T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31535 1 +     33478 T
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218811 1 -    270270 T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 7
s Mandrillus_leucophaeus.scaffold280                        317933 1 +  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352765 1 -    752769 t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669555 1 -    737560 T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             216848 1 +    317179 T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7488815 1 +  40650429 t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       145882 1 +    207569 T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79394 1 +     93471 t
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980478 1 +  93316391 t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180126 1 +    200668 T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360492 1 -   8254450 T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39393 1 -     48117 T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         17844 1 -     27822 t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     48341 1 -     62432 t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351290 1 +    437263 T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174298 1 +    366855 G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          33218 1 +     47283 T
i Murina_feae.MurFea_scaffold_17764                      C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_12866             79954 1 -     86153 t
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Myotis_brandtii.KE162005.1                               9787667 1 +  10118263 T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378053 1 +   6019432 T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18297 1 -     39439 T
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1611 1 +      3929 T
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Nasalis_larvatus.k141_1350636                              24209 1 +     34575 T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225463 1 -   7148211 t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   120335 1 -    149072 T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 2174
s Nomascus_annamensis.k141_1771965                           49161 1 -    132029 t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5257 1 -     16345 t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11140 1 +     22201 T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409477 1 -  22158432 t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21540 1 -     54323 t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Ochotona_princeps.JH802162.1                             2566623 1 -   3988456 t
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434344 1 -    630418 t
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12332 1 +    150152 t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8094728 1 +  10937097 t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Ovis_aries.CM001607.2                                   26402321 1 -  44047080 t
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       2840 1 +     17875 T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467364 1 - 189151597 t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1613767 1 +   2937107 t
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   238777 1 - 183742232 t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5244 1 +     21308 T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286281 1 -  20919399 t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  17897 1 -     27687 t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11033 1 +     16796 T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17843 1 -     23640 t
i Papio_ursinus.k141_2278143                             C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10591 1 -     15039 T
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4663 1 +      7560 T
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60370 1 -     63152 t
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            42969 1 +     45295 T
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     648 1 +      5735 t
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45493 1 +     46691 T
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             60849 1 +    207309 T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          1969 1 -     25401 t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27684 1 +     58159 t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         27960 1 +     63561 T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27723 1 +     51148 t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552718 1 -   4542175 t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27707 1 +     51125 t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2670 1 -      8168 t
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4142 1 +     39866 T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_89578                           3926 1 -      4004 T
i Plecturocebus_brunneus.k141_89578                      C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38631 1 -     87950 T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39024 1 -     88961 T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3724 1 -     39403 T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38677 1 +     87928 T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3720 1 -     60166 T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10656 1 -     67232 T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38573 1 -     90634 T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40040 1 +     89403 T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   172981 1 - 189387572 t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      187979 1 -   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23149 1 +     69807 T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40344 1 -     80239 t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7864 1 +     14086 A
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979378 1 +   4620579 t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1561960 1 -   2598838 t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_162402                            558 1 -      1093 t
i Propithecus_coronatus.k141_162402                      C 0 C 0
s Propithecus_diadema.k141_153680                              198 1 -     11706 T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            3933 1 -     30655 T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30262 1 +     46564 T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90553 1 -     98465 t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4175 1 +     35169 t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47377 1 -     66298 t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                               5836278 1 -  28871421 t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3532854 1 -   4952924 c
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51301 1 +     55069 T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                       2908396 1 +   3329780 t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24367 1 +     27361 T
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117726 1 + 195417433 t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             231975 1 -   7961872 t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70329 1 -    116970 T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1125626                              16365 1 +     16959 T
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38215 1 +     72255 T
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            10856 1 +     11432 T
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16231 1 -     16755 t
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14801 1 -     15289 t
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386797 1 - 209938924 t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7662 1 +     22212 T
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16159 1 +     39756 T
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        5910 1 +     16473 T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234348 1 +   5703754 T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           3938 1 +     21866 T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111873 1 +    313613 T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         20857 1 +     27374 T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24372 1 +     58920 T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           10869 1 -     45317 t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18526 1 -     42441 t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21208 1 -     29113 t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24280 1 -     48123 t
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854054 1 -   1910179 T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855025 1 +   3870691 t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Sus_scrofa.CM000828.4                                    6639383 1 +  69701581 t
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386453 1 +   1523678 T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                10970 1 +     22964 T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187110 1 +    199430 t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101065 1 -    539355 T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                2821 1 +      6850 T
i Tarsius_lariang.k141_1780720                           C 0 I 7
s Tarsius_wallacei.k141_226975                                2903 1 +     20590 T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348762 1 - 186847797 t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475164 1 -    610378 T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16421 1 +     26378 T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29102 1 -     78344 t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15742 1 +     25722 T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      23965 1 -     62838 t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24084 1 +     46913 T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          4892 1 -     28527 t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      25904 1 -     64340 t
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          23941 1 -     63452 t
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5383 1 +     22490 T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3003 1 +      4141 T
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5809 1 -     13050 t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251046 1 -   6242583 t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56778 1 +     59866 T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478497 1 -  10818551 a
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1825417 1 -   4065304 t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2812 1 -     70247 T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359467 1 -  33153633 t
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103285 1 -    105689 T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Varecia_rubra.k141_787544                                  21008 1 -     30710 t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              19916 1 -    147434 t
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74551 1 +   5488506 t
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_95421                      12756 1 -     12806 t
i Zapus_hudsonius.ZapHud_scaffold_95421                  I 5 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2660542            118 1 +       358 t
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      C 0 C 0
e Zalophus_californianus.ZalCal_flattened_line_17732         24398 0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                100543 0 -    112863 C
e Ursus_maritimus.KK499267.1                                177152 6 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              1926 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_59017          4060 0 -     10349 C
e Otocyon_megalotis.JAEUCK010005147.1                        34863 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1447179 0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                193797 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11464406 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14342922 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         4010 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             13921 0 -     74585 C
e Lycaon_pictus.CM007581.1                                41610181 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        808994 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24905909 0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45102596 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41611026 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          217901 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     4540 0 -     23171 C
e CanFam4.chr16                                           42500910 0 +  60362399 C
e Ailurus_fulgens.LNAC01001112.1                            211355 0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20410495 0 +  29979442 C
e Xerus_inauris.XerIna_scaffold_2302                        162004 0 -    224448 C
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tamandua_tetradactyla.TamTet_scaffold_67439                23657 0 -     25844 C
e Suricata_suricatta.SurSur_flattened_line_6629             120617 0 +    196729 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44160 3 +     77746 I
e Rattus_norvegicus.chr16                                 37011584 2 -  90668790 I
e Puma_concolor.QAVW01001104.1                            18094936 0 +  38429054 C
e Psammomys_obesus.NESX01036366.1                            32238 0 +     52041 C
e Peromyscus_maniculatus.KI615324.1                         242873 0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10975 0 +     78924 C
e Panthera_tigris.KE722367.1                               3968113 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18457384 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   20062 0 -    230217 C
e Oryctolagus_cuniculus.CM000791.1                       107098831 0 - 174332312 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103209 0 +    107918 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    85879 3 -    140218 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108700 0 +    130748 C
e Mus_spretus.CM004101.1                                  39486346 1 + 130317789 I
e Mus_pahari.LT608297.1                                   58212870 1 +  89631738 I
e Mus_musculus.chr8                                       41679237 1 + 129401213 I
e Mus_caroli.LT608237.1                                   35584855 1 + 120012414 I
e Mungos_mungo.MunMun_flattened_line_18455                   14025 0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22362 0 -     82753 C
e Microtus_ochrogaster.CM001695.1                         15959624 3 +  27267610 I
e Mico_schneideri.k141_1877700                                     14631 0 -     26561 C
e Mico_humeralifer.k141_1180625                               6668 0 -     12984 C
e Mico_argentatus.k141_582562                                 5896 0 +     17804 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44744 0 -    140813 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542 0 +     83186 C
e Helogale_parvula.HelPar_flattened_line_2585                26248 0 -    327341 C
e Felis_nigripes.FelNig_flattened_line_31944                 23470 0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185112122 0 - 205367284 C
e Ellobius_talpinus.LOJH01026522.1                            8126 3 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26208 3 +    110024 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  660201 0 -   1390856 C
e Cryptoprocta_ferox.CryFer_flattened_line_24933             45323 0 -     47254 C
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38386 0 -     83289 C
e Cebuella_pygmaea.k141_145798                               38893 0 +     53515 C
e Callithrix_kuhlii.k119_404482                              15722 0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165449429 0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           14473 0 +     17162 C
e Callimico_goeldii.k141_1609886                              5788 0 -     13885 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17746 0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           808681 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                        125 34 +     36723 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
s Acinonyx_jubatus.LLWD01001279.1                           808681 33 +   1699592 ---aaatt-T----ATTGGTA--T-AA------TAGTT--AGG--CC---------------T------------GGCCTC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     17746 40 +     63021 AGTA--TT-T----ATTTACA--A-AA------TAATT--GTG--ATG--------------TTGAT---G----TGCCTC
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 165
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410495  5 +  29979442 ---agatt-------------------------------------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            211355 35 +    347723 ---agatt-t----ACTGATAGAT-AAAAGA-CTAgga--ata--ac--t-------------------------a-----
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    10110 44 -     61208 T--CTATT-T----ATTGATA--A-AA------TAGTT--ACA--CAG-----------TGGAT-AT-A-ATG--GGCTT-
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43435 34 +     53615 T--ATGTT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39250 34 +     44087 T--ATGTT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68170 34 -     84148 T--ATATT-T----ATTGTTG--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40393 34 -     78289 T--ATATT-T----ATTGTTG--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39841 34 +     55831 T--ATATT-T----ATTGTTG--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38282 34 -     64179 T--ATATT-T----ATTGTTG--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           19925 34 -     24835 T--ATATT-T----ATTGTTG--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             36908 34 +     45454 T--ATATT-T----ATTGTTG--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42607 34 +     70886 T--ATATT-T----ATTGATG--G-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4734 34 +     30854 T--ATATT-T----ATTGTTG--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             28873 34 +     42133 T--ATATT-T----ATTGTTG--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583387 34 +   2318259 c--atatt-t----attagta--T-AA------TAGtt--atg--tt--t-------------------------gtttct
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172120 34 -    412891 T--ACATT-T----ATTGCTA--T-GA------TAGTT--CTG--CG---------------T------------GGGCTT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48483 34 -     68529 T--ATACT-T----ATTGATA--T-AA------TAGTT--ATG--AT---------------T------------GTTTCT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46678 34 -     65372 T--ATATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40426 34 +     43593 T--ATATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668436 34 +   5030052 t--atatt-t----attgata--c-aA------CAGTT--ATC--CTT---------------------------GGTGTT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20093 19 -     23494 -------------------------AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Aotus_trivirgatus.k141_192090                          I 13 C 0
s Aotus_vociferans.k141_944972                                5214 34 +      8415 T--ATATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5654 37 -     32367 ---------------TTGATA--C-AA------TATCT--ATG--CTG-----------TTGAT-AT-AAGTA--GGGGT-
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 4 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_789629                  103 34 -       318 C--ACATT-C----ATTGATA--T-AA------TAGTT--CTG--CT---------------T------------GGTCTT
i Artibeus_jamaicensis.ArtJam_scaffold_789629            I 62 n 31
s Ateles_geoffroyi_b.tarseq_1536                               270670 34 +  21539123 T--ATATT-T----GTTGATA--C-AA------CCATT--ATG--CTT---------------------------GGTGTT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6841 34 +     48076 T--ATATT-T----GTTGATA--C-AA------CCATT--ATG--CTT---------------------------GGTGTT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   1976 34 -     28759 T--ATATT-T----GTTGATA--C-AA------CCATT--ATG--CTT---------------------------GGTGTT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29527 34 +     44353 T--ATATT-T----GTTGATA--C-AA------CCATT--ATG--CTT---------------------------GGTGTT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              44902 34 -     71267 T--ATATT-T----GTTGATA--C-AA------CCATT--ATG--CTT---------------------------GGTGTT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                18958 34 -     33135 T--ATATT-T----GTTGATA--C-AA------CCATT--ATG--CTT---------------------------GGTGTT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2096 34 +     11645 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------AGCTTT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2098 34 -     19611 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955215 31 -  23207421 t--acact-g----attgaca--t-aa---------tc--atg--at--t-------------------------gtcttt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2423 31 -      4711 t--acact-g----attgaca--t-aa---------tc--atg--at--t-------------------------gtcttt
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84381 34 +    124022 T--ATATT-T----ATTAATA--T-AA------TAGTT--ATG--TT---------------T------------GTTTCT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     19912 34 +    288883 t--atact-t----attatta--t-aA------GAGTt--atg--tt--t-------------------------gtttct
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354299 34 +  48749331 t--atact-t----attatta--t-aa------tagtt--atg--tt--t-------------------------gtttct
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      752867 34 +   1948126 t--atact-t----attatta--t-aa------taGtt--atg--tt--t-------------------------gtttct
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543006 34 -  45695690 t--atact-t----attatta--t-aa------tagtt--atg--tt--t-------------------------gtttct
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528030 32 -   4408762 t--atact-t----attatta--a-aa------tagtt----g--tt--t-------------------------gtttct
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   3861 34 +     28062 T--ATACT-T----ATCGATA--C-AA------CAGTT--ATG--CTT---------------------------GATGTT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39156 34 -     91139 T--ATACT-T----ATCGATA--C-AA------CAGTT--ATG--CTT---------------------------GATGTT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16681 34 +     95584 T--ATACT-T----ATCGATA--C-AA------CAGTT--ATG--CTT---------------------------GATGTT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16594 34 +    119600 T--ATACT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GATGTT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5788 32 -     13885 ----TATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14473 32 +     17162 ----TATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449429 32 + 189096842 ----TATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15722 32 -     18408 ----TATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629213 33 +  17673402 t--acatt-t----gttgata--t-aa------tagtt--atg--c---t-------------------------gtcctt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663499 33 +   7040546 t--acatt-t----gttgata--t-aa------tagtt--atg--c---t-------------------------gtcctt
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207159 33 +   1652518 t--acatt-t----gttgata--t-aa------tagtt--atg--c---t-------------------------gtcctt
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42500910 33 +  60362399 ---AGATT-T----ACTGATA--T-AA------TAGTT--ATG--AC---------------T------------GGCTTT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4540 33 -     23171 ---AGATT-T----ACTGATA--T-AA------TAGTT--ATG--AC---------------T------------GGCTTT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          217901 33 +   9314153 ---AGATT-T----ACTGATA--T-AA------TAGTT--ATG--AC---------------T------------ggcttt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41611026 33 +  59632846 ---AGatt-t----actgata--t-aa------tagtt--atg--ac--t-------------------------ggcttc
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45102596 33 -  63665305 ---AGATT-T----ACTGATA--T-AA------TAGTT--ATG--AC---------------T------------Ggcttt
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407098 34 -  46296322 c--atatt-t----attagta--t-aa------taGtt--atg--tt--t-------------------------gtttct
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589371 34 +  44709034 c--atatt-t----attagta--t-aa------taGTt--atg--tt--t-------------------------gtttct
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265219 34 +    496798 T--ATATC-T----ATTGATA--T-AA------TAGTT--ATG--TTT---------------------------GGCTTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                 18 34 +      5315 C--ACATT-C----ATCAATA--C-AA------TAGTT--CTG--CT---------------T------------GGCCTT
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    18039 45 -     39886 T--ATATT-T----ATTGATA--A-AA------TAGGT--ATG--CTA----------TTGGT--AT-T-ATA--AGCCTT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     74914 34 -    217609 T--ACATT-T----ATTGATA--T-AC------TAGTT--ATG--CG---------------T------------GCATTT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1008 32 -     12580 ----TATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cebuella_niveiventris.k141_592277                      N 0 C 0
s Cebuella_pygmaea.k141_145798                               38893 32 +     53515 ----TATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367125 33 -  26074798 T--ATATT-T----ATTGATA--C-AA------CAGTT--A-G--CTT---------------------------GGTGTT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4014 33 -     34880 T--ATATT-T----ATTGATA--C-AA------CAGTT--A-G--CTT---------------------------GGTGTT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63109 33 -     89041 T--ATATT-T----ATTGATA--C-AA------CAGTT--A-G--CTT---------------------------GGTGTT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13490 34 -     50533 T--ATATC-T----ATTGATA--T-AA------TAGTT--ATG--TTT---------------------------GGCTTT
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15487861 34 -  27778364 c--agctt-t----attgata--t-aa------taGTT--ATT--CC---------------T------------GGCTTT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14694 34 +     27315 C--AGCTT-T----ATTGATA--T-AA------TAGTT--ATT--CC---------------T------------GGCTTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136595 34 -   4669795 t--atatt-t----attgata--t-aa------cAGTT--ATG--CTT---------------------------GGTGTT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40336 34 +     47900 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40168 34 -     44860 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40150 34 -    148725 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23136 34 -     40656 t--atgtt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3144 34 +     20796 T--ATGTT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7399 34 -     17524 t--atgtt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23091 34 -     34525 t--atgtt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7811 34 -     25376 t--atgtt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360288 34 -  39242232 T--ATGTG-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266116 34 +  21565898 T--ATGTT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27562 34 -     45857 t--atgtt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23353 34 -     32606 T--ATGTG-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27002 34 +     27662 T--ATGTT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21052 34 +     70610 T--ATGTT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         17917 34 +     36323 T--ATGTT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             26518 34 -     33796 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              712 34 -     15404 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             4959 34 -     32913 T--ATATT-T----ATTGATA--C-AA------CACTT--AGG--CTT---------------------------GGTGTT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15372 34 -     40346 T--ATATT-T----ATTGATA--C-AA------CACTT--AGG--CTT---------------------------GGTGTT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15636 34 +    216457 T--ATATT-T----ATTGATA--C-AA------CACTT--AGG--CTT---------------------------GGTGTT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15414 34 +     39636 T--ATATT-T----ATTGATA--C-AA------CACTT--AGG--CTT---------------------------GGTGTT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16463 34 -     17061 t--gtatt-t----atTCATA--C-AA------CAGTT--ATG--CTT---------------------------GGGGTT
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38501 34 -    112038 T--ATACT-T----ATCGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4073 34 +     34062 T--ATACT-T----ATCGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338815 34 +  18827391 T--ATGTT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5419 34 -     44032 t--atgtt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300141 34 - 135778131 t--atgtt-t----attgata--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404672 34 -   2368649 t--atatt-t----attgata--t-aa------cAGTT--ATG--CTT---------------------------GGTGTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373862 34 - 200372422 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4556 34 -      6605 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802792 34 +  53390261 t--gtatt-t----attaata--t-aa------aagtc--aTA--CT---------------T------------GGCCTT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8380 34 +     10921 T--ACATT-T----ATTTATA--T-AA------GACTT--ATG--CT---------------T------------GGTCTT
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 38386 45 -     83289 A--ATATT-T----ATCGATA--A-AG------TAATT--GTG--ATG-----------CTGAT-CT-A-ATA--TGCCTC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45323 33 -     47254 ---AGATT-T----ATGGATA--T-AA------TAATT--ATG--CC---------------T------------GGCCTT
i Cryptoprocta_ferox.CryFer_flattened_line_24933         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    640267 44 -   1526836 A--CCATA-C----ATTT-GT--T-AA------TAATT--ATG--CTC--------------TTGATGC-AATA-GTCCTT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288535 34 +  12879189 T--GTATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623548 31 -  35494412 t--acaCT-GATTGAT----A--T-AA---------Tc--atg--at--t-------------------------gtcttt
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134670 34 -    198055 C--ACCTT-T----ATTGATA--T-AA------TAGTT--ATT--CC---------------T------------GGCTTT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               1736 34 +     19438 t--atatt-t----attgata--t-ag------tAGTT--ATG--CT---------------T------------GGCTTT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237775 34 -    607251 t--atact-t----attgata--t-aa------taGTT--Atg--at--t-------------------------gtttct
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          26211 42 +    110024 a-----tt-t----attgata--a-aa------taatt--gTT--ATG-----------TTGAT-AT-A-ATA--TGCCTC
i Ellobius_lutescens.LOEQ01008920.1                      I 3 C 0
s Ellobius_talpinus.LOJH01026522.1                            8129 42 +     18970 a-----tt-t----attgata--a-aa------taatt--gTT--ATG-----------TTGAT-AT-A-ATA--TGCCTC
i Ellobius_talpinus.LOJH01026522.1                       I 3 C 0
s Enhydra_lutris.KZ291758.1                               24905909 35 +  41312741 ---AGATT-T----ACTGATAGAT-AAAAGA-CTAGGT--GTA--AC---------------T------------A-----
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12573306 34 +  14770903 T--ACACT-T----ATTGGTA--T-AT------GAGTT--CTG--TT---------------T------------GGCCTT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037338 34 -   4378816 T--ACATT-T----ACTGATA--T-AA------TAGTT--ATG--CT---------------T------------GGTTTT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371271 34 +  39960074 t--acatt-t----actgata--t-aa------tagtt--atg--ct--t-------------------------ggtttt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408057 34 -    498745 t--acatt-t----actgata--t-aa------tagtt--atg--ct--t-------------------------ggtttt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258371 34 +  21539334 T--ATGTT-T----ATTGATA--T-AG------CAGTT--ATG--CTT---------------------------GGTGTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63096 31 -    133382 t--acact-g----attgata--t-aa---------tc--atg--at--t-------------------------gtcttt
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3310 31 +      7672 t--acact-g----attgata--t-aa---------tc--atg--at-g--------------------------gtcttt
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11496 34 -     24895 t--atatt-t----attgata--t-aa------cagtt--atg--ttt---------------------------ggcttt
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39208 34 -     70999 t--atatt-t----attgata--t-aa------cagtt--atg--ctt---------------------------ggcttt
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83168 34 +    112731 t--atatt-t----attgata--t-aa------cagtt--atg--ctt---------------------------ggcttt
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39740 34 +     68309 t--atatt-t----attgata--t-aa------cagtt--atg--ctt---------------------------ggcttt
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50065 34 -     65740 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20695 34 -     75513 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 44888 34 -     97555 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1615 34 +     30972 T--ATATA-T----ATTGATA--T-AA------CAGTT--GTG--CTT---------------------------GGCTTT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39338 34 -     52037 t--atatt-t----attgata--t-aa------cagtt--atg--ctt---------------------------ggcttt
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55739 34 -    111500 t--atatt-t----attgata--t-aa------cagtt--atg--ctt---------------------------ggcttt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242340 33 - 206538554 ---aaATT-T----ATTGATA--T-AA------TAGTT--AGG--CC---------------T------------GGCCTC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112122 33 - 205367284 ---aaaTT-T----ATTGATA--T-AA------TAGTT--AGG--CC---------------T------------GGCCTC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23470 33 -     30238 ---AAATT-T----ATTGATA--T-AA------TAGTT--AGG--CC---------------T------------GGCCTC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14664 49 +     18121 T--ATATG-T----ATTGATA--T-AA------TAGTT--ATG--CTA--------TTGATAAA-AT-A-GTTA-GGCCTT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89450 34 -     95226 t--atact-t----attgata--t-aa------tagtt--atg--at--t-------------------------gtttct
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31311 45 -     36801 t--atatg-t----attgaAA--T-AA------TATTT--GTG--CTA-----------TTGAT-AT-A-GTA--GGCCTT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                                483 34 -      8343 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                249977 34 - 186649187 t--atatt-t----attgata--t-aa------cAGTT--ATG--CTT---------------------------GGTGTT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   10909 45 +     11903 T--ATATG-T----ATTGAGA--T-AA------TATTT--ATG--TTA-----------TTGAT-AT-A-GTA--GGCTTT
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11429 34 -     40692 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32831 34 +     49394 t--atatt-t----attgata--t-aa------cagtt--atg--ctt---------------------------ggcttt
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57699 34 -     66874 t--atatt-t----attgata--t-aa------cagtt--atg--ctt---------------------------ggcttt
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6576 34 -     42923 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13572 34 -     53142 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26248 33 -    327341 ---AGATT-T----ATTGGTA--T-AA------TAGTT--ATG--CT---------------T------------GCCCAT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7202 34 +     48891 C--ATATT-T----ATTAGTA--T-AA------TAGTT--ATG--TT---------------T------------GTTTCT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10708 28 +     12639 T--ATTTT-C----ATGGAAA--T-AC------TATTT--ACA--CT---------------------------------T
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5794 31 -     36432 t--acatt-g----attgata--t-ca---------tt--atg--cc--t-------------------------gtcttt
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545627 34 -   1711038 g--acatt-t----attgata--t-aa------taGTT--ATG--CT---------------T------------GGTCTT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               44918 34 +     49977 g--acatt-t----attgata--t-aa------tagtt--atg--ct--t-------------------------ggtctt
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    137877 34 -    630532 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                                905 34 +     12352 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8088 34 +     55766 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047432 34 + 191637585 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796764 34 +  11177569 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2587 43 -    135385 T--ATTTT-T----ATTGAGA--T-AG------TAAGT--ATATATT--------------AT--AT-A-AAA--GACCTT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374716 46 +   7955117 t--atatt-t----attga-a--t-aa------tattt--atg--CTG----------TCAAT--AT-AAGTAa-gatatt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2435083                                     776 34 +      1070 T--ATATC-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1330 31 -     16823 t--acact-gattgat----a--t-aa---------tc--atg--at--t-------------------------gtcttt
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1232538 44 +   9596543 t--atatt-t----attgata--a-aA------TAGTT--TTG--CAG-----------TAGAC-AT-A-AAG--GGATT-
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 63830 31 -     97402 T--ACACT-G----ATTGATA--T-AA---------TC--ATG--AG---------------T------------GTCTTT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39222 34 +    110728 T--ATATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58808 34 -     65777 T--ACACT-T----ATTAGTA--T-AA------TAGTT--CCG--TT---------------T------------GGCCTT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756221 34 +  30322482 t--atatt-t----attgata--t-aa------cagtt--atg--ctt---------------------------ggcttt
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        4874 34 -      5330 t--gtatt-t----atTGATA--C-AA------CAGTT--ATG--TTT---------------------------GGTGTT
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16311 35 -     16762 T--GTATT-T----ATTGATA--C-AA------CAGTT-AATG--TTT---------------------------GGTGTT
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16610 34 -     17065 t--gtatt-t----atTGATA--C-AA------CAGTT--ATG--TTT---------------------------GGTGTT
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6135 34 -     11567 t--gtatt-t----atTGATA--A-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7516 34 -     12945 t--gtatt-t----atTGATA--A-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          4875 34 +     29618 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4874 34 +     31569 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTGT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          4882 34 +     24756 T--ATATT-T----ATTGATG--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       4879 34 +     16388 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        808994 35 -   3914936 ---agatt-t----ACTGATAGAT-AAAAGG-CTAGGC--ATA--AC---------------T------------A-----
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             332853 31 +    662738 t--acact-gattgat----a--t-aa---------tc--atg--at--t-------------------------gtcttt
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328551 34 -   1826925 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39075866 34 +  43346337 t--atttt-t----atggatc--t-ac------tagtt--ata--ct--t-------------------------ggcctt
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41610181 33 +  59628241 ---AGATT-T----ACTGATA--T-AA------TAGTT--ATG--AC---------------T------------ggcttt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              40832 34 -     61512 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368460 34 -  60120075 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20779 34 +     30207 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           17882 34 -     24934 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20666 34 +     30527 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31855 34 -     50087 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41593 34 +     51645 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410167 34 - 187317192 t--atatt-t----attgata--t-aa------cAGTT--ATG--CTT---------------------------GGTGTT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395050 34 +  25927173 t--ctatt-t----attgata--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44182 34 -     62418 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                20869 34 +     24253 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40626 34 +     59329 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266458 34 +    668171 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17804 34 +     21031 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31536 34 +     33478 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218819 23 -    270270 ------------------ATA--T-AG------TAGTT--ATG--CT---------------T------------GGCTTT
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 7 C 0
s Mandrillus_leucophaeus.scaffold280                        317934 34 +  24302211 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352766 34 -    752769 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669556 34 -    737560 T--ACACT-T----ATTGATA--T-GA------TAATT--ATC--CT---------------T------------GGACTT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             216849 33 +    317179 T--ACACT-T----ATTGATA--T-GA------TAATT--ATC--CT---------------T------------GGA-TT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7488816 46 +  40650429 t--atatt-t----attga-a--t-aa------tattt--atg--CTG----------TCAAT--AT-AAGTAa-gatatt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       145883 34 +    207569 T--ACATT-T----ATTTATA--T-AG------TAGTT--ATG--CT---------------T------------GGCCTT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             13921 35 -     74585 ---AGATT-T----ACTGATAGAT-AAAAGG-CTAGGC--GTA--AC---------------T------------A-----
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 44744 29 -    140813 AATA--TT-T----ACTGATA--AAAA------TAATT--GTG--ATG---------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 2
s Mesoplodon_bidens.MesBid_scaffold_6114                     79395 31 +     93471 t--acact-gattgat----a--t-aa---------tc--atg--at--t-------------------------gtcttt
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 5896 32 +     17804 ----TATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6668 32 -     12984 ----TATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14631 32 -     26561 ----TATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980479 34 +  93316391 t--atatt-t----atcgATA--T-AA------CAGCT--GTG--CTT---------------------------GGCTTT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180127 34 +    200668 T--ACACT-T----ATTGCTA--T-AA------TAGTT--CTG--CT---------------T------------GGCCTT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15959627 42 +  27267610 a-----tt-t----attgata--a-aa------taatt--gTT--ATG-----------TTGAT-AT-A-ATA--TGCCTC
i Microtus_ochrogaster.CM001695.1                        I 3 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360493 34 -   8254450 T--ACACT-T----ACTGATA--T-AA------TAGTT--CTG--CT---------------T------------GGCCTT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39394 34 -     48117 T--ACACT-T----ACTGATA--T-AA------TAGTT--CTG--CT---------------T------------GGCCTT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         17845 34 -     27822 t--atgtt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4010 35 +     27589 ---AGATT-T----ACTGATAGAT-AAAAGG-CTAGGC--ATA--AC---------------T------------A-----
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     48342 34 -     62432 t--atatt-t----atTGATA--T-AA------CAGCT--ATG--CTT---------------------------GGCTTT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351291 31 +    437263 T--ACACT-GATTGAT----A--T-AA---------TC--ATG--AT---------------T------------GTCTTT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174299 34 +    366855 T--TCATA-T----ATTAATA--T-AA------TAGTT--CTG--CT---------------T------------GGGTTT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22362 20 -     82753 -----------------------T-AA------TAGTT--ATG--TT---------------T------------GTCTCT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14025 33 -     63510 ---AGATT-T----ATTGATA--T-AA------TAGTT--ATG--CT---------------T------------GCCCTT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          33220 33 +     47283 ---ACACT-T----ACTGATA--T-AA------TAGTT--CTG--CT---------------T------------GACCTT
i Murina_feae.MurFea_scaffold_17764                      I 1 C 0
s Mus_caroli.LT608237.1                                   35584856 29 + 120012414 ------------------ata--a-aa------taatc--gTA--GTG--------------TT------GATa-tgtctc
i Mus_caroli.LT608237.1                                  I 1 C 0
s Mus_musculus.chr8                                       41679238 29 + 129401213 ------------------ATA--A-AA------TAATT--GTG--GTG--------------TT----C-ATA--TGTCTC
i Mus_musculus.chr8                                      I 1 C 0
s Mus_pahari.LT608297.1                                   58212871 29 +  89631738 ------------------ATA--A-AA------TAATT--GTG--GTG--------------TT------GATA-TGTCTC
i Mus_pahari.LT608297.1                                  I 1 C 0
s Mus_spretus.CM004101.1                                  39486347 29 + 130317789 ------------------ata--a-aa------taatt--atg--gtG--------------TT------GATA-TGTCTC
i Mus_spretus.CM004101.1                                 I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             79955 45 -     86153 c--atatg-c----actgaaa--t-ag------tattt--att--ctA-----------TTGAT-AT-A-GTA--GGCCTT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14342922 35 +  14710649 ---AGATT-T----ACTGATAGAT-AAAAGG-CTAGGC--GTA--AC---------------T------------A-----
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9787668 34 +  10118263 T--ACACT-T----ACTGATA--T-AA------TAGTT--CTG--CT---------------T------------GGCCTT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378054 34 +   6019432 T--ACACT-T----ATTGATA--C-AA------TAGTT--CTG--CT---------------T------------GGCCTT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18298 34 -     39439 T--ACACT-T----ATTGATA--T-AA------TAGTT--CTG--CT---------------T------------GGCCTT
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1612 34 +      3929 T--ACACT-T----ATTGATA--T-AA------TAGTT--CTG--CT---------------T------------GGCCTT
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108700 11 +    130748 -----------------TATA--T-AG------TAGA--------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 3
s Nasalis_larvatus.k141_1350636                              24210 34 +     34575 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464406 35 -  31847680 ---agatt-T----ACTGATAGAT-AAAAGG-CTAGGC--ATA--AC---------------T------------A-----
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225464 27 -   7148211 t--acaCT-C----AT----A--T-AA---------Tc--atg--at--t-------------------------gtcttt
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122510 34 -    149072 T--GCATT-T----CTTATTA--T-AA------TAGTT--CTG--CT---------------T------------GACCTT
i Noctilio_leporinus.NocLep_scaffold_7894                I 2174 C 0
s Nomascus_annamensis.k141_1771965                           49162 34 -    132029 t--atatt-t----atTGATG--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5258 34 -     16345 t--atatt-t----atTGATG--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11141 34 +     22201 T--ATATT-T----ATTGATG--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409478 34 -  22158432 t--atatt-t----atTGATG--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21541 34 -     54323 t--atatt-t----atTGATG--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193797 33 +   9404916 ---AGATT-T----ACTGATA--T-AA------TAGTT--ATG--AC---------------T------------GGCTTT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2566624 55 -   3988456 t--atatt-t----attgata--t-ga------tagta--atg--ttagtt-atactatatGTT-AT-C-GTT--AGTCTT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447179 35 +   2017862 ---agatt-t----ACTGAAAGAT-AAAAGG-CTAGGC--ATA--AC---------------T------------C-----
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434345 34 -    630418 t--atact-t----attgata--t-aa------cagtt--atg--at--t-------------------------atttct
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12333 34 +    150152 t--atact-t----attgata--t-aa------tagtt--atg--at--t-------------------------gtttct
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    85882 39 -    140218 A-----TT-T----ATTGATA--A-AA------TAAT-----T--ATG-----------TTGAT-AT-A-ATA--TACCTC
i Ondatra_zibethicus.OndZib_scaffold_7387                I 3 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   103209 42 +    107918 A-----TT-T----ATTGATA--A-AG------TAATT--GTT--ATG--------TTGATGTA-AT-----A--TGCCTC
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orcinus_orca.KB316932.1                                  8094729 27 +  10937097 t--acaCT-G----AT----A--T-AA---------TC--atg--at--t-------------------------gtcttt
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107098831 13 - 174332312 ----tgtt-t----attgacC--C---------------------------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 33
s Otocyon_megalotis.JAEUCK010005147.1                        34863 33 +    559221 ---AGATT-T----ACTGATA--T-AA------TAGTT--ATG--AC---------------T------------GGCTTT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26402322 34 -  44047080 c--atatt-t----attagta--T-AA------TAGTt--atg--tt--t-------------------------gtttct
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       2841 34 +     17875 C--ATATT-T----ATTAGTA--T-AA------TAGTT--ATG--TT---------------T------------GTTTCT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467365 34 - 189151597 t--atatt-t----attgata--t-aa------caGTT--ATG--CTT---------------------------GGTGTT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20062 29 -    230217 ---AAATT-T----ATTGATA--T-GA------T------AGG--CC---------------T------------GGCCTC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18457384 33 -  18783137 ---aaATT-T----ATTGATA--T-AA------TAGTT--AGG--CC---------------T------------GGCCTC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968113 33 +   8748460 ---aaATT-C----ATTGATA--T-AA------TAGTT--AGG--CC---------------T------------GGCCTC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1613768 34 +   2937107 t--atatt-t----attagta--t-AA------TAGtt--atg--tt--t-------------------------gtttct
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   238778 34 - 183742232 t--atatt-t----attgata--t-aa------cAGTT--ATG--CTT---------------------------GGTGTT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5245 34 +     21308 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286282 34 -  20919399 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  17898 34 -     27687 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11034 34 +     16796 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17844 34 -     23640 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     10975 33 +     78924 ---AGATT-T----ATTGATA--T-AA------TAGTT--ATG--CC---------------T------------GGTCTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         242873 45 +  18517816 A-----TT-T----ATTGATA--A-AG------TAATT--GTT--ACA--------TTGATATA-AT-A-ATA--TGCCTC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10592 27 -     15039 T--ACACT-G----AT----A--T-AA---------TC--ATG--AT---------------T------------GTCTTT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4664 34 +      7560 T--ATCTT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60371 34 -     63152 t--atctt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            42970 34 +     45295 T--ATCTT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     649 34 +      5735 t--atctt-t----attgATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45494 34 +     46691 T--ACACT-T----ATTGATA--C-AG------TAGTT--CTA--TT---------------T------------GGCCTT
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             60850 34 +    207309 T--ACATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          1970 34 -     25401 t--acatt-t----atTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27685 34 +     58159 t--acatt-t----attgata--c-aa------cagtt--atg--ctt---------------------------ggtgtt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         27961 34 +     63561 T--ACATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27724 34 +     51148 t--acatt-t----attgata--c-aa------cagtt--atg--ctt---------------------------ggtgtt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552719 34 -   4542175 t--acatt-t----atTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27708 34 +     51125 t--acatt-t----attgata--c-aa------cagtt--atg--ctt---------------------------ggtgtt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2671 27 -      8168 t--acact-g----at----a--t-aa---------tc--atg--at--t-------------------------gtcttt
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4143 32 +     39866 T--ATATT-T----ATTGATA--C-AA------CA--C--AGG--CTT---------------------------GGTGTT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_89578                           3927 32 -      4004 T--ATATT-T----ATTGATA--C-AA------CA--C--AGG--CTT---------------------------GGTGTT
i Plecturocebus_brunneus.k141_89578                      C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38632 32 -     87950 T--ATATT-T----ATTGATA--C-AA------CA--C--AGG--CTT---------------------------GGTGTT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39025 32 -     88961 T--ATATT-T----ATTGATA--C-AA------CA--C--AGG--CTT---------------------------GGTGTT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3725 32 -     39403 T--ATATT-T----ATTGATA--C-AA------CA--T--AGG--CTT---------------------------GGTGTT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38678 32 +     87928 T--ATATT-T----ATTGATA--C-AA------CA--C--AGG--CTT---------------------------GGTGTT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3721 32 -     60166 T--ATATT-T----ATTGATA--C-AA------CA--C--AGG--CTT---------------------------GGTGTT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10657 32 -     67232 T--ATATT-T----ATTGATA--C-AA------CA--C--AGG--CTT---------------------------GGTGTT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38574 32 -     90634 T--ATATT-T----ATTGATA--C-AA------CA--C--AGG--CTT---------------------------GGTGTT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40041 32 +     89403 T--ATATT-T----ATTGATA--C-AA------CA--C--AGG--CTT---------------------------GGTGTT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   172982 34 - 189387572 t--atatt-t----attgata--t-aa------cAGTT--ATG--CTT---------------------------GGTGTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      187980 34 -   9816681 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23150 34 +     69807 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40345 34 -     80239 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7865 28 +     14086 T--ATTTT-C----ATGGAAA--T-AC------TATTT--ACA--CT---------------------------------T
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979379 34 +   4620579 t--atatt-t----attgata--t-aa------caGTT--ATG--CTT---------------------------GGCTTT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1561961 34 -   2598838 t--atatt-t----attgata--t-aa------cAGTT--ATG--CTT---------------------------GGCTTT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_162402                            559 34 -      1093 t--atatt-t----attgata--t-aa------cagtt--atg--ctt---------------------------ggcttt
i Propithecus_coronatus.k141_162402                      C 0 I 248
s Propithecus_diadema.k141_153680                              199 34 -     11706 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            3934 34 -     30655 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30263 34 +     46564 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGCTTT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90554 34 -     98465 t--atatt-t----attgata--t-aa------cagtt--atg--ctt---------------------------ggcttt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4176 34 +     35169 t--atatt-t----attgata--t-aa------cagtt--atg--ctt---------------------------ggcttt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            32238 29 +     52041 AATA--TT-T----ACTGATA--AAAA------TAGTT--GTG--ATG---------------------------------
i Psammomys_obesus.NESX01036366.1                        C 0 I 2
s Pteronotus_parnellii.KE847780.1                            47378 34 -     66298 t--acatt-t----attgata--t-aa------cagtt--ctg--ct--t-------------------------ggcctt
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4060 35 -     10349 ---AGATT-T----ACTGATAGAT-AAAAGG-CTAGGC--ATA--AC---------------T------------A-----
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 C 0
s Pteropus_alecto.KB030862.1                               5836279 34 -  28871421 t--acatt-t----attgata--t-aG------TAGCT--ATG--CT---------------T------------GGCTTT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3532855 34 -   4952924 t--acatc-t----attgata--t-ag------TAGCT--ATG--CT---------------T------------GGCTTT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18094936 33 +  38429054 ---aaaTT-T----ATTGGTA--T-AA------TAGTT--AGG--CC---------------T------------GGCCTC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51303 33 +     55069 ---ATACT-T----ATTGATA--T-AA------CAGTT--ATG--AT---------------T------------ATTTCT
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 1 C 0
s Rattus_norvegicus.chr16                                 37011586 23 -  90668790 ---------------------------------TAATT--GTG--ATG--------------TT-GT---G-A--TGGCTC
i Rattus_norvegicus.chr16                                I 2 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2908397 33 +   3329780 t--acatt-t----attgata--t-aa------tagtt--att--ct--t-------------------------ggt-ct
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24368 34 +     27361 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117727 34 + 195417433 t--atatt-t----attgata--t-aa------cAGTT--ATG--CTT---------------------------GGTGTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             231976 34 -   7961872 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70330 34 -    116970 T--AGGTT-T----ATTGATA--T-AG------TAGTT--ATG--CT---------------T------------GGCTTT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1125626                              16366 34 +     16959 T--GTATT-T----ATTCATA--C-AA------CAGTT--ATG--CTT---------------------------GGGGTT
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38216 34 +     72255 T--GTATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGGGTT
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            10857 34 +     11432 T--GTATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGGGTT
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16232 34 -     16755 t--gtatt-t----atTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGGGTT
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14802 34 -     15289 t--gtatt-t----atTGATA--C-AA------CAGTT--ATG--CCT---------------------------GGGGTT
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386798 34 - 209938924 t--gtatt-t----atTCATA--C-AA------CAGTT--ATG--CTT---------------------------GGGGTT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7663 34 +     22212 T--GTATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGGGTT
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16160 34 +     39756 T--GTATT-T----ATTGATA--C-AA------CAGTT--ATG--CTT---------------------------GGGGTT
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        5911 31 +     16473 T--ATGCT-T----ATTAATA--T-AA------TAGTT--ATG--TT---------------T------------GTT---
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234349 33 +   5703754 T--ATATG-T----ATTGATA--C-AA------CAGTT--A-G--CTT---------------------------GGTGTT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           3939 33 +     21866 T--ATATG-T----ATTGATA--C-AA------CAGTT--A-G--CTT---------------------------GGTGTT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111874 34 +    313613 T--ACATT-T----ATCAATA--T-AA------AAGTT--ATG--CT---------------T------------GGCCTT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         20858 34 +     27374 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24373 34 +     58920 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           10870 34 -     45317 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18527 34 -     42441 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21209 34 -     29113 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24281 34 -     48123 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    44163 42 +     77746 A-----TT-T----ATCGATA--A-AT------TAATT--GTT--ACA-----------TTGAT-AT-C-ATA--TGCCTC
i Sigmodon_hispidus.SigHis_scaffold_20193                I 3 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854055 34 -   1910179 T--ACATT-T----ATCGACA--C-AA------TAGTT--ATA--TT---------------T------------AGCCTT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855026 46 +   3870691 t--atatt-t----attga-a--t-aa------tattt--atg--CTG----------TCAAT--AT-AAGTAa-gatatt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              1926 34 -     97271 ---AGATT-T----ACT-ATAGAT-AAAA-AGCTAGGT--ATA--AC---------------T------------G-----
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120617 33 +    196729 ---AGATT-T----ATTGATA--T-AA------TAGTT--ATG--CT---------------T------------GCCATT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6639384 34 +  69701581 t--acatt-t----attgata--t-aa------tagtt--ata--tt--t-------------------------gctttt
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386454 34 +   1523678 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                10971 34 +     22964 T--ACACT-T----ATTGATA--T-AA------TAGGT--CTG--CT---------------T------------GGCCTT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                23657 11 -     25844 -----------------TATA--T-AG------TAGA--------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_67439            C 0 I 3
s Tapirus_indicus.TapInd_scaffold_7432                      187111 34 +    199430 c--acatt-t----attgata--a-aa------tagtt--atg--cc--t-------------------------ggcctt
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101066 34 -    539355 C--TCATT-T----ATTGATA--A-AA------TAGTT--ATG--CC---------------T------------GGCCTT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                2829 24 +      6850 -----------------GACA--T-AA------TAGTT--ATG--TTT---------------------------GACTTT
i Tarsius_lariang.k141_1780720                           I 7 C 0
s Tarsius_wallacei.k141_226975                                2904 34 +     20590 T--ATATT-T----ATTGACA--T-AA------TAGTT--ATG--TTT---------------------------GACTTT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348763 34 - 186847797 t--atatt-t----attgata--t-aa------cAGTT--ATG--CTT---------------------------GGTGTT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475165 34 -    610378 T--ACATT-T----ATCGATA--C-AA------TAGTT--CTA--CT---------------T------------GGCCTT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16422 34 +     26378 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29103 34 -     78344 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15743 34 +     25722 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      23966 34 -     62838 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24085 34 +     46913 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          4893 34 -     28527 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      25905 34 -     64340 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          23942 34 -     63452 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5384 34 +     22490 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3004 34 +      4141 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5810 34 -     13050 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251047 34 -   6242583 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56779 34 +     59866 T--ATATT-T----ATTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGTGTT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478498 34 -  10818551 t--atttt-t----agggATC--T-AC------TAGTT--GTA--CG---------------T------------GGCTTC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1825418 45 -   4065304 t--atatt-t----attgaca--t-ga------tagta--ata--tta-ttgata-ta-at-----------a--GGACTT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2813 45 -     70247 T--ATATT-T----ATTGACA--T-GA------TAGTA--ATA--TTA-----------TTGAT-AT-A-ATA--GGCCTT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359468 27 -  33153633 t--acact-g----at----a--t-aa---------tc--atg--at--t-------------------------gtcttt
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103286 35 -    105689 T--ACATTTT----ATTAATA--T-AA------AATTT--ATG--CT---------------T------------GGTTTT
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177158 24 +   5085361 -----------------GATA--T-AA------TAGAA--ATG--CC---------------T------------GGcctt
i Ursus_maritimus.KK499267.1                             I 6 C 0
s Varecia_rubra.k141_787544                                  21009 34 -     30710 t--atatt-t----attgata--t-aa------cagtt--atg--ctt---------------------------gggttt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              19917 34 -    147434 t--atatt-t----atTGATA--T-AA------CAGTT--ATG--CTT---------------------------GGGTTT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74552 33 +   5488506 t--acatt-t----gttgata--t-aa------tagtt--atg--c---t-------------------------gtcctt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100543 33 -    112863 ---AGATT-T----ACTGATA--T-AA------TAATT--ATG--AC---------------T------------GGCTTT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162004 45 -    224448 ----TATT-T----ATTGATA--T-AG------TATTT--ATG--CTA---------TCAAG---AT-A-ATTAAGATCTT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24398 35 -     86975 ---AGATT-T----ACTGATAGAT-AAAAGG-CTAGGC--ATA--AC---------------T------------A-----
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_95421                      12757 45 -     12806 t--atata-t----attgata--t-ca------taGTT--AAG--CTG-----------TTGAT-CT-A-ATA--GGCTTT
i Zapus_hudsonius.ZapHud_scaffold_95421                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2660542            119 31 +       358 t--acact-gattgat----a--t-aa---------tc--atg--at--t-------------------------gtcttt
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      C 0 C 0
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542  0 +     83186 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  660201  0 -   1390856 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        159 4 +     36723 TCAT
s Acinonyx_jubatus.LLWD01001279.1                           808714 4 +   1699592 TTAC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     17951 4 +     63021 TCAT
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 165 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410500 3 +  29979442 -tat
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            211390 2 +    347723 t--t
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    10154 4 -     61208 TCAT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43469 4 +     53615 TCAT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39284 4 +     44087 TCAT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68204 4 -     84148 TCAT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40427 4 -     78289 TCAT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39875 4 +     55831 TCAT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38316 4 -     64179 TCAT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           19959 4 -     24835 TCAT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             36942 4 +     45454 TCAT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42641 4 +     70886 TCAT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4768 4 +     30854 TCAT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             28907 4 +     42133 TCAT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583421 4 +   2318259 tcat
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172154 4 -    412891 TCAT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48517 4 -     68529 TCAT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46712 4 -     65372 TCAT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40460 4 +     43593 TCAT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668470 4 +   5030052 TCAT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20112 4 -     23494 TCAT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5248 4 +      8415 TCAT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5691 1 -     32367 ---G
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_859459                  112 4 -       293 TCAT
i Artibeus_jamaicensis.ArtJam_scaffold_859459            I 31 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270704 4 +  21539123 TCAT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6875 4 +     48076 TCAT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2010 4 -     28759 TCAT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29561 4 +     44353 TCAT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              44936 4 -     71267 TCAT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                18992 4 -     33135 TCAT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2130 4 +     11645 TCAT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2132 4 -     19611 TCAT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955246 4 -  23207421 tcat
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2454 4 -      4711 tcat
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84415 4 +    124022 TCAT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     19946 4 +    288883 tcat
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354333 4 +  48749331 tcat
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      752901 4 +   1948126 tctt
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543040 4 -  45695690 tcat
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528062 4 -   4408762 tcat
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   3895 4 +     28062 CCAT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39190 4 -     91139 CCAT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16715 4 +     95584 CCAT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16628 4 +    119600 CCAT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5820 4 -     13885 TCAT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14505 4 +     17162 TCAT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449461 4 + 189096842 TCAT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15754 4 -     18408 TCAT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629246 4 +  17673402 tcat
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663532 4 +   7040546 tcat
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207192 4 +   1652518 tcat
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42500943 4 +  60362399 TCAT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4573 4 -     23171 TCAT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          217934 4 +   9314153 tcat
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41611059 4 +  59632846 tcat
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45102629 4 -  63665305 tcat
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407132 4 -  46296322 tcat
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589405 4 +  44709034 tcat
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265253 4 +    496798 CCAT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                 52 4 +      5315 TCAT
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    18084 4 -     39886 TAAT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     74948 4 -    217609 TCAT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1040 4 -     12580 TCAT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               38925 4 +     53515 TCAT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367158 4 -  26074798 TCAT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4047 4 -     34880 TCAT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63142 4 -     89041 TCAT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13524 4 -     50533 CCAT
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15487895 4 -  27778364 TTAT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14728 4 +     27315 TTAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136629 4 -   4669795 TCAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40370 4 +     47900 TCAT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40202 4 -     44860 TCAT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40184 4 -    148725 TCAT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23170 4 -     40656 TCAT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3178 4 +     20796 TCAT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7433 4 -     17524 TCAT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23125 4 -     34525 TCAT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7845 4 -     25376 TCTT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360322 4 -  39242232 TCAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266150 4 +  21565898 TCAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27596 4 -     45857 TCAT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23387 4 -     32606 TCAT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27036 4 +     27662 TCAT
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21086 4 +     70610 TCAT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         17951 4 +     36323 TCAT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             26552 4 -     33796 TCAT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              746 4 -     15404 TCAT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             4993 4 -     32913 TCAT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15406 4 -     40346 TCAT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15670 4 +    216457 TCAT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15448 4 +     39636 TCAT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16497 4 -     17061 TCAT
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38535 4 -    112038 CCAT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4107 4 +     34062 CCAT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338849 4 +  18827391 TCAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5453 4 -     44032 TCAT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300175 4 - 135778131 TCAT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404706 4 -   2368649 TCAT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373896 4 - 200372422 TCAT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4590 4 -      6605 TCAT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8414 4 +     10921 TCAT
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 38431 4 -     83289 TCAT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45356 4 -     47254 TTAT
i Cryptoprocta_ferox.CryFer_flattened_line_24933         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    640311 4 -   1526836 TCAT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288569 4 +  12879189 TCAT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623579 4 -  35494412 tcat
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134704 4 -    198055 TTAT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               1770 4 +     19438 TCAT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237809 4 -    607251 tcat
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          26253 4 +    110024 TCAT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                            8171 4 +     18970 TCAT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24905944 2 +  41312741 T--T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12573340 4 +  14770903 TCAT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037372 3 -   4378816 TAA-
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371305 3 +  39960074 taa-
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408091 3 -    498745 taa-
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258405 4 +  21539334 TCAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63127 4 -    133382 tcat
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3341 4 +      7672 tcat
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11530 4 -     24895 tcat
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39242 4 -     70999 tcat
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83202 4 +    112731 tcat
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39774 4 +     68309 tcat
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50099 4 -     65740 TCAT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20729 4 -     75513 TCAT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 44922 4 -     97555 TCAT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1649 4 +     30972 TCAT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39372 4 -     52037 tcat
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55773 4 -    111500 tcat
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242373 4 - 206538554 TTAC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112155 4 - 205367284 TTAC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23503 4 -     30238 TTAC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14713 4 +     18121 TCAT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89484 4 -     95226 ttat
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31356 4 -     36801 TCAT
i Glis_glis.GliGli_scaffold_33859                        C 0 I 4
s Gorilla_beringei.k141_3358147                                517 4 -      8343 TCAT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250011 4 - 186649187 TCAT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   10954 4 +     11903 TCAT
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11463 4 -     40692 TCAT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32865 4 +     49394 tcat
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57733 4 -     66874 tcat
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6610 4 -     42923 TCAT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13606 4 -     53142 TCAT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26281 4 -    327341 TTAT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7236 4 +     48891 TCAT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10736 4 +     12639 TTGT
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5825 4 -     36432 tctt
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545661 4 -   1711038 TCAC
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               44952 4 +     49977 tcac
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    137911 4 -    630532 TCAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                                939 4 +     12352 TCAT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8122 4 +     55766 TCAT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047466 4 + 191637585 TCAT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796798 4 +  11177569 TCAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2630 4 -    135385 TCAT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374762 4 +   7955117 tcat
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2435083                                     810 4 +      1070 TCAT
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1361 4 -     16823 tcat
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1232582 4 +   9596543 tcat
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 63861 4 -     97402 TCAT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39256 4 +    110728 TCAT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58842 4 -     65777 TCCT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756255 4 +  30322482 tcat
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        4908 4 -      5330 TCAT
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16346 4 -     16762 TCAT
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16644 4 -     17065 TCAT
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6169 4 -     11567 TCAT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7550 4 -     12945 TCAT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          4909 4 +     29618 TCAT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4908 4 +     31569 TCAT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          4916 4 +     24756 TCAT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       4913 4 +     16388 TCAT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809029 2 -   3914936 T--T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     11484 1 +     24238 ---t
i Lepus_americanus.LepAme_scaffold_56121                 N 0 I 144
s Lipotes_vexillifer.KE559953.1                             332884 4 +    662738 tcat
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328585 4 -   1826925 TCAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39075900 4 +  43346337 ttgt
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41610214 4 +  59628241 tcat
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              40866 4 -     61512 TCAT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368494 4 -  60120075 TCAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20813 4 +     30207 TCAT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           17916 4 -     24934 TCAT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20700 4 +     30527 TCAT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31889 4 -     50087 TCAT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41627 4 +     51645 TCAT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410201 4 - 187317192 TCAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395084 4 +  25927173 TCAT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44216 4 -     62418 TCAT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                20903 4 +     24253 TCAT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40660 4 +     59329 TCAT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266492 4 +    668171 TCAT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17838 4 +     21031 TCAT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31570 4 +     33478 TCAT
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218842 4 -    270270 TCAC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        317968 4 +  24302211 TCAT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352800 4 -    752769 TCAT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669590 4 -    737560 TCAT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             216882 4 +    317179 TCAT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7488862 4 +  40650429 tcat
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       145917 4 +    207569 TCAT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             13956 2 -     74585 T--T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79426 4 +     93471 tcat
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 5928 4 +     17804 TCAT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6700 4 -     12984 TCAT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14663 4 -     26561 TCAT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980513 4 +  93316391 TCAT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180161 4 +    200668 CCCT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15959669 4 +  27267610 TCAT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360527 4 -   8254450 TCAT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39428 4 -     48117 TCAT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         17879 4 -     27822 TCAT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4045 2 +     27589 T--T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     48376 4 -     62432 TCAT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351322 4 +    437263 TCAT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174333 4 +    366855 TCAT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22382 4 -     82753 TCAT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14058 4 -     63510 TTAT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 2
s Murina_feae.MurFea_scaffold_17764                          33253 4 +     47283 CCCT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35584885 4 + 120012414 tcct
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41679267 4 + 129401213 TCAT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58212900 4 +  89631738 TTGT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39486376 4 + 130317789 TCAT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80000 4 -     86153 TCAT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14342957 2 +  14710649 T--T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9787702 4 +  10118263 TCAT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378088 4 +   6019432 TCAT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18332 4 -     39439 TCAT
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1646 4 +      3929 TCAT
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108714 4 +    130748 TTGT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 3 C 0
s Nasalis_larvatus.k141_1350636                              24244 4 +     34575 TCAT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464441 2 -  31847680 T--T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225491 4 -   7148211 tcat
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122544 4 -    149072 TCAT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49196 4 -    132029 TCAT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5292 4 -     16345 TCAT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11175 4 +     22201 TCAT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409512 4 -  22158432 TCAT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21575 4 -     54323 TCAT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193830 4 +   9404916 TCAT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2566679 4 -   3988456 CCAT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447214 2 +   2017862 T--T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434379 4 -    630418 tcat
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12367 4 +    150152 ttat
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    85921 4 -    140218 TCAT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   103251 4 +    107918 TCAT
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orcinus_orca.KB316932.1                                  8094756 4 +  10937097 tcat
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107098877 1 - 174332312 ---T
i Oryctolagus_cuniculus.CM000791.1                       I 33 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        34896 4 +    559221 TCAT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26402356 4 -  44047080 tcat
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       2875 4 +     17875 TCAT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467399 4 - 189151597 TCAT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20091 4 -    230217 TTAC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18457417 4 -  18783137 TTAC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968146 4 +   8748460 TTAC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1613802 4 +   2937107 tcat
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   238812 4 - 183742232 TCAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5279 4 +     21308 TCAT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286316 4 -  20919399 TCAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  17932 4 -     27687 TCAT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11068 4 +     16796 TCAT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17878 4 -     23640 TCAT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11008 4 +     78924 TTAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         242918 4 +  18517816 TCAT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10619 4 -     15039 TCAT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4698 4 +      7560 TCAT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60405 4 -     63152 TCAT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43004 4 +     45295 TCAT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     683 4 +      5735 TCAT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45528 4 +     46691 TCAT
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             60884 4 +    207309 TCAT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2004 4 -     25401 TCAT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27719 4 +     58159 TCAT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         27995 4 +     63561 TCAT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27758 4 +     51148 TCAT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552753 4 -   4542175 TCAT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27742 4 +     51125 TCAT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2698 4 -      8168 tcat
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4175 4 +     39866 TCAT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_89578                           3959 4 -      4004 TCAT
i Plecturocebus_brunneus.k141_89578                      C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38664 4 -     87950 TCAT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39057 4 -     88961 TCAT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3757 4 -     39403 TCAT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38710 4 +     87928 TCAT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3753 4 -     60166 TCAT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10689 4 -     67232 TCAT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38606 4 -     90634 TCAT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40073 4 +     89403 TCAT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173016 4 - 189387572 TCAT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188014 4 -   9816681 TCAT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23184 4 +     69807 TCAT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40379 4 -     80239 TCAT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7893 4 +     14086 TTGT
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979413 4 +   4620579 TCAT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1561995 4 -   2598838 TCAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79082 4 -     79582 TCAT
i Propithecus_coronatus.k141_149744                      I 38 C 0
s Propithecus_diadema.k141_153680                              233 4 -     11706 TCAT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            3968 4 -     30655 TCAT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30297 4 +     46564 TCAT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90588 4 -     98465 tcat
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4210 4 +     35169 tcat
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47412 4 -     66298 tctt
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4095 2 -     10349 T--T
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 C 0
s Pteropus_alecto.KB030862.1                               5836313 4 -  28871421 TCAT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3532889 4 -   4952924 TCAT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18094969 4 +  38429054 TTAC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51336 4 +     55069 TCAT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37011609 4 -  90668790 TCAT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2908430 4 +   3329780 tcat
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24402 4 +     27361 TCAT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117761 4 + 195417433 TCAT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232010 4 -   7961872 TCAT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70364 4 -    116970 TCAT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1125626                              16400 4 +     16959 TCAT
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38250 4 +     72255 TCAT
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            10891 4 +     11432 TCAT
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16266 4 -     16755 TCAT
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14836 4 -     15289 TCAT
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386832 4 - 209938924 TCAT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7697 4 +     22212 TCAT
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16194 4 +     39756 TCAT
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        5942 4 +     16473 TCAT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234382 4 +   5703754 TCAT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           3972 4 +     21866 TCAT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         20892 4 +     27374 TCAT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24407 4 +     58920 TCAT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           10904 4 -     45317 TCAT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18561 4 -     42441 TCAT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21243 4 -     29113 TCAT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24315 4 -     48123 TCAT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    44205 4 +     77746 TCAA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855072 4 +   3870691 tcat
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              1960 2 -     97271 T--T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120650 4 +    196729 TTAT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                    6639418 4 +  69701581 tcat
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386488 4 +   1523678 TCAT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11005 4 +     22964 TCAT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                23671 4 -     25844 TTGT
i Tamandua_tetradactyla.TamTet_scaffold_67439            I 3 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187145 4 +    199430 tcat
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101100 4 -    539355 TCAT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                2853 4 +      6850 CAAT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                2938 4 +     20590 CAAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348797 4 - 186847797 TCAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475199 4 -    610378 CCAT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16456 4 +     26378 TCAT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29137 4 -     78344 TCAT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15777 4 +     25722 TCAT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24000 4 -     62838 TCAT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24119 4 +     46913 TCAT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          4927 4 -     28527 TCAT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      25939 4 -     64340 TCAT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          23976 4 -     63452 TCAT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5418 4 +     22490 TCAT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3038 4 +      4141 TCAT
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5844 4 -     13050 TCAT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251081 4 -   6242583 TCAT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56813 4 +     59866 TCAT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478532 4 -  10818551 TCAA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1825463 4 -   4065304 TCAT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2858 4 -     70247 TCAT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359495 4 -  33153633 tcat
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Ursus_maritimus.KK499267.1                                177182 4 +   5085361 ttat
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  21043 4 -     30710 tcat
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              19951 4 -    147434 TCAT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74585 4 +   5488506 tcat
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100576 4 -    112863 TCAT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162049 4 -    224448 TCAT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24433 2 -     86975 T--T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_95421                      12802 4 -     12806 TCAT
i Zapus_hudsonius.ZapHud_scaffold_95421                  C 0 N 0
s Ziphius_cavirostris.ZipCav_flattened_line_2660542            150 4 +       358 tcat
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      C 0 C 0
e Uropsilus_gracilis.UroGra_scaffold_7153                   103321 0 -    105689 C
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1854089 0 -   1910179 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    111908 0 +    313613 C
e Psammomys_obesus.NESX01036366.1                            32267 2 +     52041 I
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44773 2 -    140813 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542 0 +     83186 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  660201 0 -   1390856 C
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Condylura_cristata.JH655891.1                           35802826 0 +  53390261 C

a score=0.000000
s hg38.chrUn_KI270755v1                                        163  6 +     36723 GCG-T---------------A------T
s Acinonyx_jubatus.LLWD01001279.1                           808718  7 +   1699592 Ctg-t---------------a-----tt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     17955  7 +     63021 GGA-C---------------T-----TT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 9
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410503  7 +  29979442 ctg-t---------------t-----tt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            211392 22 +    347723 ttt-ttttttaggaatgacTA-----TT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    10158  7 -     61208 CTA-T---------------C-----TT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 231
s Allenopithecus_nigroviridis.k141_3755588                   43473  6 +     53615 GCA-T---------------A------T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39288  6 +     44087 GCA-T---------------A------T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68208  6 -     84148 GCA-T---------------A------T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40431  6 -     78289 GCA-T---------------A------T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39879  6 +     55831 GCA-T---------------A------T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38320  6 -     64179 GCA-T---------------A------T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           19963  6 -     24835 GCG-T---------------A------T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             36946  6 +     45454 GCA-T---------------A------T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42645  6 +     70886 GCA-T---------------A------T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4772  6 +     30854 GCA-T---------------A------T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             28911  6 +     42133 GCA-T---------------A------T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583425  7 +   2318259 ttg-c---------------c-----tt
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172158  7 -    412891 CTG-T---------------C-----TT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48521  7 -     68529 TTG-C---------------C-----TT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46716  6 -     65372 GCA-T---------------A------T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40464  6 +     43593 GCA-T---------------A------T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668474  6 +   5030052 GCA-T---------------A------T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20116  6 -     23494 GCA-T---------------A------T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5252  6 +      8415 GCA-T---------------A------T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5692  7 -     32367 CTC-T---------------T-----TT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_859459                  116  7 -       293 CTG-T---------------C-----TC
i Artibeus_jamaicensis.ArtJam_scaffold_859459            C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270708  6 +  21539123 GCA-C---------------A------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6879  6 +     48076 GCA-C---------------A------T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2014  6 -     28759 GCA-C---------------A------T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29565  6 +     44353 GCA-C---------------A------T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              44940  6 -     71267 GCA-C---------------A------T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                18996  6 -     33135 GCA-C---------------A------T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2134  7 +     11645 GCATT---------------G------T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2136  7 -     19611 GCATT---------------G------T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955250  7 -  23207421 ctg-c---------------c-----tt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2458  7 -      4711 ctg-c---------------c-----tt
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84419  7 +    124022 TTG-C---------------C-----TT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     19950  7 +    288883 ttg-c---------------c-----tT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354337  7 +  48749331 ttg-c---------------c-----tT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      752905  7 +   1948126 ttg-c---------------c-----tt
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543044  7 -  45695690 ttg-c---------------c-----tT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528066  7 -   4408762 ttg-c---------------c-----tT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   3899  6 +     28062 GCA-T---------------A------T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39194  6 -     91139 GCA-T---------------A------T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16719  6 +     95584 GCA-T---------------A------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16632  6 +    119600 GCA-T---------------A------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5824  6 -     13885 GCA-T---------------A------T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14509  6 +     17162 GCA-T---------------A------T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449465  6 + 189096842 GCA-T---------------A------T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15758  6 -     18408 GCA-T---------------A------T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629250  7 +  17673402 ctg-t---------------c-----tt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663536  7 +   7040546 ctg-t---------------c-----tt
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207196  7 +   1652518 ctg-t---------------c-----tt
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42500947  5 +  60362399 CTG-T---------------T-------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4577  5 -     23171 CTG-T---------------T-------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          217938  5 +   9314153 ctg-t---------------t-------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41611063  5 +  59632846 ctg-t---------------t-------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45102633  5 -  63665305 ctg-t---------------t-------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407136  7 -  46296322 ttg-c---------------c-----tt
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589409  7 +  44709034 ttg-c---------------c-----tt
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265257  7 +    496798 ACA-T--------------TT------T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                 56  7 +      5315 CTG-T---------------C-----TC
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    18088  7 -     39886 CTC-T---------------C-C----T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     74952  7 -    217609 CTG-T---------------C-----TT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1044  6 -     12580 GCA-T---------------A------T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               38929  6 +     53515 GCA-T---------------A------T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367162  6 -  26074798 GCA-T---------------G------C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4051  6 -     34880 GCA-T---------------G------C
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63146  6 -     89041 GCA-T---------------G------C
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13528  7 -     50533 ACG-T--------------TT------T
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15487899  7 -  27778364 CTG-T---------------C-----TT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14732  7 +     27315 CTG-T---------------C-----TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136633  6 -   4669795 GCG-T---------------A------T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40374  6 +     47900 GCG-T---------------A------T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40206  6 -     44860 GCG-T---------------A------T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40188  6 -    148725 GCG-T---------------A------T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23174  6 -     40656 GCA-T---------------A------T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3182  6 +     20796 GCA-T---------------A------T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7437  6 -     17524 GCA-T---------------A------T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23129  6 -     34525 GTA-T---------------A------T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7849  6 -     25376 GCA-T---------------A------T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360326  6 -  39242232 GCA-T---------------A------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266154  6 +  21565898 GCA-T---------------A------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27600  6 -     45857 GCA-T---------------A------T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23391  6 -     32606 GCA-T---------------A------T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27040  6 +     27662 GCA-T---------------A------T
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21090  6 +     70610 GCA-T---------------A------T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         17955  6 +     36323 GCA-T---------------A------T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             26556  7 -     33796 GCATT---------------G------T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              750  7 -     15404 GCATT---------------G------T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             4997  6 -     32913 GCA-T---------------A------T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15410  6 -     40346 GCA-T---------------A------T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15674  6 +    216457 GCA-T---------------A------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15452  6 +     39636 GCA-T---------------A------T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16501  6 -     17061 GCA-T---------------A------T
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38539  6 -    112038 GCA-T---------------A------T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4111  6 +     34062 GCA-T---------------A------T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338853  6 +  18827391 GCA-T---------------A------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5457  6 -     44032 GCA-T---------------A------T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300179  6 - 135778131 GCA-T---------------A------T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404710  6 -   2368649 GCA-T---------------A------T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373900  6 - 200372422 GCA-T---------------A------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4594  6 -      6605 GCA-T---------------A------T
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802826  4 +  53390261 ctg-t-----------------------
i Condylura_cristata.JH655891.1                          C 0 I 11
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8418  7 +     10921 CTG-T---------------C-----TT
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 38435  7 -     83289 GGT-T---------------C-----TT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45360  7 -     47254 CTG-T---------------C-----TT
i Cryptoprocta_ferox.CryFer_flattened_line_24933         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    640315  7 -   1526836 TTT-T---------------C-----TT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288573  7 +  12879189 GCATC---------------A------T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623583  7 -  35494412 ctg-c---------------c-----tT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134708  7 -    198055 CTG-T---------------C-----TT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               1774  7 +     19438 CTG-T---------------C-----TT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237813  7 -    607251 ttg-c---------------c-----tt
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          26257  7 +    110024 TGG-T---------------T-----TT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                            8175  7 +     18970 TGG-T---------------T-----TT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24905946  7 +  41312741 ATG-T---------------C-----TT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12573344  7 +  14770903 CTG-T---------------C-----TT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037375  6 -   4378816 -TG-T---------------C-----TT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371308  6 +  39960074 -tg-t---------------c-----tt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408094  6 -    498745 -tg-t---------------c-----tt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258409  6 +  21539334 GCA-T---------------A------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63131  7 -    133382 ctg-c---------------c-----tt
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 17
s Eubalaena_japonica.EubJap_flattened_line_118172             3345  7 +      7672 ctg-c---------------c-----tt
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11534  7 -     24895 gcaat---------------g------t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39246  7 -     70999 gcaat---------------g------t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83206  7 +    112731 gcaat---------------g------t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39778  7 +     68309 gcaat---------------g------t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50103  7 -     65740 GCAAT---------------G------T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20733  7 -     75513 GCAAT---------------G------T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 44926  7 -     97555 GCAAT---------------G------T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1653  7 +     30972 GCAAT---------------G------T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39376  7 -     52037 gcaat---------------g------t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55777  7 -    111500 gcaat---------------g------t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242377  7 - 206538554 Ctg-t---------------a-----tt
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112159  7 - 205367284 Ctg-t---------------a-----tt
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23507  7 -     30238 CTG-T---------------A-----TT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14717  6 +     18121 CCA-T---------------C------T
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89488  7 -     95226 ttg-c---------------c-----tt
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31364  1 -     36801 ---------------------------T
i Glis_glis.GliGli_scaffold_33859                        I 4 C 0
s Gorilla_beringei.k141_3358147                                521  6 -      8343 GCA-T---------------A------T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250015  6 - 186649187 GCA-T---------------A------T
i Gorilla_gorilla.LT578341.1                             C 0 I 37
s Graphiurus_murinus.GraMur_scaffold_90206                   10958  8 +     11903 CTT-T--------------TT-----TT
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11467  7 -     40692 GCAAT---------------G------T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32869  7 +     49394 gcaat---------------g------t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57737  7 -     66874 gcaat---------------g------t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6614  7 -     42923 GCAAT---------------G------T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13610  7 -     53142 GCAAT---------------G------T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26287  3 -    327341 --------------------T-----TT
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7240  7 +     48891 TTG-C---------------C-----TT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10740  6 +     12639 CTG-T---------------C------T
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5829  7 -     36432 ctg-c---------------c-----tt
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545665  7 -   1711038 TTG-T---------------C-----TT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               44956  7 +     49977 ccg-t---------------c-----tt
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    137915  6 -    630532 GCA-T---------------A------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                                943  6 +     12352 GCA-T---------------A------T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8126  6 +     55766 GCA-T---------------A------T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047470  6 + 191637585 GCA-T---------------A------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796802  6 +  11177569 GCA-T---------------A------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2634  7 -    135385 TTC-C---------------C-----TT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374766  7 +   7955117 ctt-t---------------t-----tt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2435083                                     814  7 +      1070 GCATT---------------G------T
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1365  7 -     16823 ctg-c---------------c-----tt
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1232586  7 +   9596543 caa-t---------------c-----tt
i Jaculus_jaculus.JH725527.1                             C 0 I 205
s Kogia_breviceps.KogBre_flattened_line_3970                 63865  7 -     97402 CAG-C---------------C-----TT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39260  4 +    110728 GCA-C-----------------------
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58846  7 -     65777 CTG-T---------------C-----TT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756259  7 +  30322482 gcaat---------------g------t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        4912  6 -      5330 GCA-T---------------A------T
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16350  6 -     16762 GCA-T---------------A------T
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16648  6 -     17065 GCA-T---------------A------T
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6173  6 -     11567 GTA-T---------------A------T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7554  6 -     12945 GTA-T---------------A------T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          4913  7 +     29618 GCATC---------------G------T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4912  7 +     31569 GCATC---------------A------T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          4920  7 +     24756 GCATC---------------G------C
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       4917  7 +     16388 GCATC---------------A------T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809031  7 -   3914936 Atg-t---------------c-----tt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     11629  7 +     24238 cTG-C---------------C-C----T
i Lepus_americanus.LepAme_scaffold_56121                 I 144 C 0
s Lipotes_vexillifer.KE559953.1                             332888  7 +    662738 ctg-c---------------c-----tt
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328589  6 -   1826925 GCA-T---------------A------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39075904  6 +  43346337 ctg-t---------------c------t
i Loxodonta_africana.GL010049.1                          C 0 I 1
s Lycaon_pictus.CM007581.1                                41610218  5 +  59628241 ctg-t---------------t-------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              40870  6 -     61512 GCA-T---------------A------T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368498  6 -  60120075 GCA-T---------------A------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20817  6 +     30207 GCA-T---------------A------T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           17920  6 -     24934 GCA-T---------------A------T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20704  6 +     30527 GCA-T---------------A------T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31893  6 -     50087 GCA-T---------------A------T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41631  6 +     51645 GCA-T---------------A------T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410205  6 - 187317192 GCA-T---------------A------T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395088  6 +  25927173 GCA-T---------------A------T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44220  6 -     62418 GCA-T---------------A------T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                20907  6 +     24253 GCA-T---------------A------T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40664  6 +     59329 GCA-T---------------A------T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266496  6 +    668171 GCA-T---------------A------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17842  6 +     21031 GCA-T---------------A------T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31574  6 +     33478 GCA-T---------------A------T
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218846  7 -    270270 CTG-T---------------C-----TT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        317972  6 +  24302211 GCA-T---------------A------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352804  6 -    752769 GCA-T---------------A------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669594  7 -    737560 CTC-T---------------C-----TT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             216886  7 +    317179 CTC-T---------------C-----TT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7488866  7 +  40650429 ctt-t---------------t-----tt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       145921  7 +    207569 TCG-T---------------C-----TA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             13958  7 -     74585 ATG-T---------------C-----TT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 44775  6 -    140813 -GT-T---------------C-----TT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 2 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79430  7 +     93471 ctg-c---------------c-----tt
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 5932  6 +     17804 GCA-T---------------A------T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6704  6 -     12984 GCA-T---------------A------T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14667  6 -     26561 GCA-T---------------A------T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980517  7 +  93316391 GCATT---------------G------T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180165  7 +    200668 CTG-T---------------C-----TT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15959673  7 +  27267610 TGG-T---------------T-----TT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360531  7 -   8254450 CTG-T---------------T----G-T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39432  7 -     48117 CTG-T---------------T----G-T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         17883  6 -     27822 GCA-T---------------A------T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4047  7 +     27589 Atg-t---------------c-----tt
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     48380  7 -     62432 GCATT---------------G------T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351326  7 +    437263 CTG-C---------------C-----TT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174337  7 +    366855 CTG-T---------------C-----TT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22386  7 -     82753 TTG-C---------------C-----TT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14064  3 -     63510 --------------------T-----TT
i Mungos_mungo.MunMun_flattened_line_18455               I 2 C 0
s Murina_feae.MurFea_scaffold_17764                          33257  7 +     47283 CTG-T---------------C-----TT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35584889  8 + 120012414 tgt-c---------------t----ttt
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41679271  7 + 129401213 TGT-C---------------T-----TT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58212904  7 +  89631738 TGT-C---------------T-----TT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39486380  7 + 130317789 TGT-C---------------T-----TT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80004  7 -     86153 CTC-T---------------T-----TT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14342959  7 +  14710649 ATG-T---------------C-----TT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9787706  7 +  10118263 CTG-C---------------C-----TT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378092  7 +   6019432 CTG-T---------------C-----TT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18336  7 -     39439 CTG-C---------------C-----TT
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1650  7 +      3929 CTG-T---------------C-----TT
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108718 12 +    130748 CTT-T---------------CACCCGTC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              24248  6 +     34575 GCA-T---------------A------T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464443  7 -  31847680 Atg-t---------------c-----tt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225495  7 -   7148211 ctg-c---------------c-----tT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122548  7 -    149072 CTG-T---------------C-----TT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49200  6 -    132029 GCA-T---------------A------T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5296  6 -     16345 GCA-T---------------A------T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11179  6 +     22201 GCA-T---------------A------T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409516  6 -  22158432 GCA-T---------------A------T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21579  6 -     54323 GCA-T---------------A------T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193834  5 +   9404916 CTG-T---------------C-------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2566683  7 -   3988456 TTA-T---------------C-----TT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447216  7 +   2017862 ATG-T---------------C-----TT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434383  7 -    630418 ttg-c---------------c-----tT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12371  7 +    150152 ttg-c---------------c-----tt
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    85925  7 -    140218 CGT-T---------------T-----TT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   103255  7 +    107918 TAT-T---------------C-----TC
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orcinus_orca.KB316932.1                                  8094760  7 +  10937097 ctg-c---------------c-----tT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107098878  7 - 174332312 TTG-C---------------C-C----T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        34900  5 +    559221 CAG-T---------------C-------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26402360  7 -  44047080 ttg-c---------------c-----tt
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       2879  7 +     17875 TTG-C---------------C-----TT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467403  6 - 189151597 GCA-T---------------A------T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20095  7 -    230217 CTG-T---------------A-----TT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18457421  7 -  18783137 Ctg-t---------------a-----tt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968150  7 +   8748460 Ctg-t---------------a-----tt
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1613806  7 +   2937107 ttg-c---------------c-----tt
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   238816  6 - 183742232 GCA-T---------------A------T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5283  6 +     21308 GCA-T---------------A------T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286320  6 -  20919399 GCA-T---------------A------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  17936  6 -     27687 GCA-T---------------A------T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11072  6 +     16796 GCA-T---------------A------T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17882  6 -     23640 GCA-T---------------A------T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11012  7 +     78924 CTG-T---------------C-----TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         242922  7 +  18517816 TGT-T---------------C-----TC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10623  7 -     15039 CTG-C---------------C-----TT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4702  6 +      7560 GCA-T---------------A------T
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60409  6 -     63152 GCA-T---------------A------T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43008  6 +     45295 GCA-T---------------A------T
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     687  6 +      5735 GCA-T---------------A------T
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45532  7 +     46691 CTG-T---------------C-----TT
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             60888  6 +    207309 GCA-T---------------A------T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2008  6 -     25401 GCA-T---------------A------T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27723  6 +     58159 GCA-T---------------A------T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         27999  6 +     63561 GCA-T---------------A------T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27762  6 +     51148 GCA-T---------------A------T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552757  6 -   4542175 GCA-T---------------A------T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27746  6 +     51125 GCA-T---------------A------T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2702  7 -      8168 ctg-c---------------c-----tt
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4179  6 +     39866 GCA-T---------------A------C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_89578                           3963  6 -      4004 GCA-T---------------A------C
i Plecturocebus_brunneus.k141_89578                      C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38668  6 -     87950 GCA-T---------------A------C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39061  6 -     88961 GCA-T---------------A------C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3761  6 -     39403 GCA-T---------------A------C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38714  6 +     87928 GCA-T---------------A------C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3757  6 -     60166 GCA-T---------------A------C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10693  6 -     67232 GCA-T---------------A------C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38610  6 -     90634 GCA-T---------------A------C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40077  6 +     89403 GCA-T---------------A------C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173020  6 - 189387572 GCA-T---------------A------T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188018  6 -   9816681 GCA-T---------------A------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23188  6 +     69807 GCA-T---------------A------T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40383  6 -     80239 GCA-T---------------A------T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7897  6 +     14086 CTG-T---------------C------T
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 I 1
s Prolemur_simus.MPIZ01000396.1                            1979417  7 +   4620579 GCAAT---------------G------T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1561999  7 -   2598838 GCATT---------------G------T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79086  7 -     79582 GCATT---------------G------T
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              237  7 -     11706 GCATT---------------G------T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            3972  7 -     30655 GCATT---------------G------T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30301  7 +     46564 GCATT---------------G------T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90592  7 -     98465 gcatt---------------g------t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4214  7 +     35169 gcatt---------------g------t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            32269  6 +     52041 -GT-T---------------C-----TT
i Psammomys_obesus.NESX01036366.1                        I 2 C 0
s Pteronotus_parnellii.KE847780.1                            47416  7 -     66298 ctg-t---------------c-----tt
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4097  7 -     10349 ATG-T---------------C-----TT
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 C 0
s Pteropus_alecto.KB030862.1                               5836317  7 -  28871421 CTG-T---------------C-----TT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3532893  7 -   4952924 CTG-T---------------C-----TT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18094973  7 +  38429054 Ctg-t---------------a-----tt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51340  7 +     55069 TTG-C---------------C-----TT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37011613  7 -  90668790 TGT-C---------------C-----TT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2908434  7 +   3329780 ctg-t---------------t-----tt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24406  6 +     27361 GCA-T---------------A------T
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117765  6 + 195417433 GCA-T---------------A------T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232014  6 -   7961872 GCA-T---------------A------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70368  7 -    116970 CTG-T---------------C-----TT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1125626                              16404  6 +     16959 GCA-T---------------A------T
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38254  6 +     72255 GCA-T---------------A------T
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            10895  6 +     11432 GCA-T---------------A------T
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16270  6 -     16755 GCA-T---------------A------T
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14840  6 -     15289 GCA-T---------------A------T
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386836  6 - 209938924 GCA-T---------------A------T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7701  6 +     22212 GCA-T---------------A------T
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16198  6 +     39756 GCA-T---------------A------T
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        5946  7 +     16473 TTG-C---------------C-----TT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234386  6 +   5703754 GCA-T---------------G------C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           3976  6 +     21866 GCA-T---------------G------C
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111908  4 +    313613 CTG-T-----------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 11
s Semnopithecus_entellus.k141_158471                         20896  6 +     27374 GCA-T---------------A------T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24411  6 +     58920 GCA-T---------------A------T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           10908  6 -     45317 GCA-T---------------A------T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18565  6 -     42441 GCA-T---------------A------T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21247  6 -     29113 GCA-T---------------A------T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24319  6 -     48123 GCA-T---------------A------T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    44209  7 +     77746 TGT-C---------------C-----TT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854089  7 -   1910179 CTG-T---------------T-----TG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 12
s Spermophilus_dauricus.KZ294078.1                         1855076  7 +   3870691 ctt-t---------------t-----tt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              1962  7 -     97271 ACG-T---------------C-----TT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120656  3 +    196729 --------------------T-----TT
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                    6639422  7 +  69701581 cTA-G---------------C-----TT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386492  6 +   1523678 GCA-T---------------A------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11009  7 +     22964 CTG-T---------------C-----TT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                23675 12 -     25844 CTT-T---------------CACCTGTC
i Tamandua_tetradactyla.TamTet_scaffold_67439            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187149  7 +    199430 ctg-t---------------c-----tt
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101104  7 -    539355 CTG-T---------------C-----TT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                2857  7 +      6850 ACA-T--------------TT------T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                2942  7 +     20590 ACA-T--------------TT------T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348801  6 - 186847797 GCA-T---------------A------T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475203  7 -    610378 CTG-T---------------C-----TC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16460  6 +     26378 GCA-T---------------A------T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29141  6 -     78344 GCA-T---------------A------T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15781  6 +     25722 GCA-T---------------A------T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24004  6 -     62838 GCA-T---------------A------T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24123  6 +     46913 GCA-T---------------A------T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          4931  6 -     28527 GCA-T---------------A------T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      25943  6 -     64340 GCA-T---------------A------T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          23980  6 -     63452 GCA-T---------------A------T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5422  6 +     22490 GCA-T---------------A------T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3042  6 +      4141 GCA-T---------------A------T
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5848  6 -     13050 GCA-T---------------A------T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251085  6 -   6242583 GCA-T---------------A------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56817  6 +     59866 GCA-T---------------A------T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478536  6 -  10818551 CTG-T---------------C------T
i Trichechus_manatus.JH594705.1                          C 0 I 1
s Tupaia_chinensis.KB320699.1                              1825467  7 -   4065304 CTA-C---------------T-----TT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2862  7 -     70247 CTA-C---------------T-----TT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359499  7 -  33153633 ctg-c---------------c-----tt
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103321  8 -    105689 CTG-T--------------GT-----TT
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 20
s Ursus_maritimus.KK499267.1                                177186  7 +   5085361 ctg-t---------------t-----tt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  21047  7 -     30710 gcaat---------------g------t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              19955  7 -    147434 GCAAT---------------G------T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74589  7 +   5488506 ctg-t---------------c-----tt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100580  5 -    112863 ATG-T---------------C-------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162053  7 -    224448 CTT-T---------------T-----TT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24435  7 -     86975 ATG-T---------------C-----TT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_209943                       199  7 -      3146 CTA-T---------------C-----TT
i Zapus_hudsonius.ZapHud_scaffold_209943                 N 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2660542            154  7 +       358 ctg-c---------------t-----tt
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      C 0 C 0
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542  0 +     83186 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  660201  0 -   1390856 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        169 37 +     36723 AT----GATAG----CA-TCT-------TA--TG---TGTT---C---AT-AAA--TTTT-A-AAA---G-----T-T
s Acinonyx_jubatus.LLWD01001279.1                           808725 37 +   1699592 at----ttta-----ga-ttt-------ta--tgtgTT------G---AT-CAA--TTTCCA-GAA---G-----T-T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 20
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410510 36 +  29979442 at----gtta-----ga-ttt-------ta--tgtgtt------t---at-caa--ttttca--aa---g-----t-t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 20
s Ailurus_fulgens.LNAC01001112.1                            211414 36 +    347723 AT----Gtta-----ga-ttt-------ta--tatgtt------t---at-caA--TTTTCA--AA---G-----T-T
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 20
s Allactaga_bullata.AllBul_scaffold_20030                    10396 37 -     61208 AT----ATTA-----GC-TTT-------TG--TG---TAGT---T---AT-AAA--TGTTTA-CAA---G-----T-T
i Allactaga_bullata.AllBul_scaffold_20030                I 231 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43479 38 +     53615 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-GTAAA---G-----T-T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39294 38 +     44087 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-GTAAA---G-----T-T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68214 40 -     84148 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----GTT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40437 40 -     78289 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----GTT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39885 40 +     55831 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----GTT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38326 40 -     64179 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----GTT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           19969 40 -     24835 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----GTT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             36952 40 +     45454 GT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----GTT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42651 40 +     70886 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----GTT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4778 40 +     30854 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----GTT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             28917 40 +     42133 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----GTT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583432 37 +   2318259 at----gata-----ga-ttt-------ta--ta---t---attt---at-aag--tttTCA-TAA---G-----T-T
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      172165 37 -    412891 AT----GTTA-----GA-TTT-------TG--TGTGTT------T---AT-ACA--TTTTTA-GAA---G-----T-T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 21
s Antilocapra_americana.AntAmePen_scaffold_21030             48528 37 -     68529 AT----GATA-----GA-TTT-------TA--AG---T---ATTT---AT-AAG--TTTTCA-TAA---A-----T-T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 1
s Aotus_azarae.k141_118258                                   46722 39 -     65372 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40470 39 +     43593 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668480 39 +   5030052 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--tgtt-a-aaaag-g-----t-t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20122 39 -     23494 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5258 39 +      8415 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5699 37 -     32367 GT----TTTA-----GA-GTA-------TG--TG---TGTT---T---AT-TTA--ATTTTA-GAA---G-----T-T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_859459                  123 37 -       293 AT----GTTA-----GA-TTT-------TG--TGTGTT------T---AT-ACA--TTTTTA-GAA---G-----T-T
i Artibeus_jamaicensis.ArtJam_scaffold_859459            C 0 I 21
s Ateles_geoffroyi_b.tarseq_1536                               270714 40 +  21539123 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----TTT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6885 40 +     48076 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----TTT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2020 40 -     28759 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----TTT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29571 40 +     44353 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----TTT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              44946 40 -     71267 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----TTT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19002 40 -     33135 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----TTT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2141 38 +     11645 AT----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2143 38 -     19611 AT----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955257 37 -  23207421 at----gtca-----ga-ttt-------ta--tg---t---gttt---gt-aaa--ttttca-gaa---g-----t-t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 1
s Balaenoptera_bonaerensis.DF507193.1                         2465 37 -      4711 at----gtca-----ga-ttt-------ta--tg---t---gttt---gt-aaa--ttttca-gaa---g-----t-t
i Balaenoptera_bonaerensis.DF507193.1                    C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_7278                     84426 37 +    124022 AT----TATA-----GA-TTT-------TA--TG---T---ATTT---AT-AAG--TTTTCA-TAA---G-----T-T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 1
s Bison_bison.KN261452.1                                     19957 37 +    288883 AT----Gata-----ga-ttt-------ta--tg---t---attt---at-aac--ttTTCA-TAA---G-----T-T
i Bison_bison.KN261452.1                                 C 0 I 1
s Bos_indicus.CM003047.1                                  20354344 37 +  48749331 AT----GATA-----GA-TTT-------TA--TG---T---ANTT---AT-AAC--TTTTCA-TAA---G-----T-T
i Bos_indicus.CM003047.1                                 C 0 I 1
s Bos_mutus.JH880303.1                                      752912 37 +   1948126 at----gata-----ga-ttt-------ta--tg---t---attt---at-aac--ttTTCA-TAA---G-----T-T
i Bos_mutus.JH880303.1                                   C 0 I 1
s Bos_taurus.CM000203.6                                   27543051 37 -  45695690 AT----GATA-----GA-TTT-------TA--TG---T---ACTT---AT-AAC--TTTTCA-TAA---G-----T-T
i Bos_taurus.CM000203.6                                  C 0 I 1
s Bubalus_bubalis.KI419123.1                               1528073 37 -   4408762 AT----Gata-----ga-ttt-------ta--tg---t---attt---at-aag--tTTTCA-TAA---G-----T-T
i Bubalus_bubalis.KI419123.1                             C 0 I 1
s Cacajao_ayresi.k141_96119                                   3905 39 +     28062 GT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGCT-A-AAAAG-G-----T-T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39200 39 -     91139 GT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGCT-A-AAAAG-G-----T-T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16725 39 +     95584 GT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGCT-A-AAAAG-G-----T-T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16638 39 +    119600 GT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGCT-A-AAAAG-G-----T-T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5830 39 -     13885 TT----CATAG----GA-TCT-------TA--TG---TGTT---C---TT-AAA--TGAT-A-AAAAG-G-----T-T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14515 39 +     17162 TT----CATAG----GA-TCT-------TA--TG---TGTT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449471 39 + 189096842 TT----CATAG----GA-TCT-------TA--TG---TGTT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15764 39 -     18408 TT----CATAG----GA-TCT-------TA--TG---TGTT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629257 37 +  17673402 at----gtta-----ga-ttc-------ta--ca---t---gtct---gt-aaa--ttttca-gaa---g-----t-t
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           4663543 37 +   7040546 at----gtta-----ga-ttc-------ta--ca---t---gtct---gt-aaa--ttttca-gaa---g-----t-t
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                 1207203 37 +   1652518 at----gtta-----ga-ttc-------ta--ca---t---gtct---gt-aaa--ttttca-gaa---g-----t-t
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           42500952 28 +  60362399 ------------------TTT-------TA--TGTGTT------T---AT-CAA--TTTTCA--AA---G-----T-T
i CanFam4.chr16                                          C 0 I 20
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4582 28 -     23171 ------------------TTT-------TA--TGTGTT------T---AT-CAA--TTTTCA--AA---G-----T-T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 20
s Canis_lupus_dingo.QKWQ01000480.1                          217943 28 +   9314153 ------------------ttt-------ta--tgtgtt------t---at-caa--ttttca--aa---g-----t-t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 20
s Canis_lupus_familiaris.chr16                            41611068 28 +  59632846 ------------------ttt-------ta--tgtgtt------t---at-caa--ttttca--aa---g-----t-t
i Canis_lupus_familiaris.chr16                           C 0 I 20
s Canis_lupus_orion.HG994398.1                            45102638 28 -  63665305 ------------------ttt-------ta--tgtgtt------t---at-caa--ttttca--aa---g-----t-t
i Canis_lupus_orion.HG994398.1                           C 0 I 20
s Capra_aegagrus.CM003241.1                               27407143 37 -  46296322 at----gaca-----ga-ttt-------ta--ta---t---attt---at-aag--tttTCA-TAA---G-----T-T
i Capra_aegagrus.CM003241.1                              C 0 I 1
s Capra_hircus.CM004588.1                                 26589416 37 +  44709034 at----gaca-----ga-ttt-------ta--ta---t---attt---at-aag--tttTCA-TAA---G-----T-T
i Capra_hircus.CM004588.1                                C 0 I 1
s Carlito_syrichta.NW_007259797.1                           265264 41 +    496798 GT----GTTA-----GC-TTT-------TA--Tg---tgtt---t---at-caa--tttt-t-aaa---agatttt-t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                 63 37 +      5315 GT----GTTA-----GA-TTT-------TG--TGTGTT------T---AT-ACA--TTTTTA-GAA---G-----T-T
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 21
s Castor_canadensis.CasCan_scaffold_39952                    18095 37 -     39886 AT----GTTA-----GG-TTT-------TA--TG---TGTT---T---AT-AAG--GTTTTG-GAG---G-----A-T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     74959 12 -    217609 AT----GTTA-----GT-TTT-------T-------------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1050 39 -     12580 TT----CATAG----GA-TCT-------TA--TG---TGTT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               38935 39 +     53515 TT----CATAG----GA-GCT-------TA--TG---TGTT---C---TT-AAA--TGTT-A-AAAAG-T-----T-T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367168 39 -  26074798 AT----GGTAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4057 39 -     34880 AT----GGTAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63152 39 -     89041 AT----GGTAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13535 41 -     50533 TT----GTTA-----GC-TTT-------TA--TG---TGTT---T---AT-CAA--TTTT-T-AAA---AGATTTT-T
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15487906 37 -  27778364 AT----GTTA-----ga-ttt-------ta--tgtgtt------t---at-aaa--ttttca-gaa---g-----t-t
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14739 37 +     27315 AT----GTTA-----GA-TTT-------TA--TGTGTT------T---AT-AAA--TTTTCA-GAA---G-----T-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 1
s Cercocebus_atys.KQ010504.1                                136639 38 -   4669795 AT----GATAA----CA-TCT-------ta--tg---tgtt---t---at-aca--tttt-ataaa---g-----t-t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40380 38 +     47900 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40212 38 -     44860 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40194 38 -    148725 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23180 38 -     40656 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3188 38 +     20796 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7443 38 -     17524 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23135 38 -     34525 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7855 38 -     25376 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360332 38 -  39242232 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266160 38 +  21565898 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27606 38 -     45857 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23397 38 -     32606 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27046 38 +     27662 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21096 38 +     70610 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         17961 38 +     36323 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             26563 38 -     33796 GT----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTA-A-AAA---G-----T-T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              757 38 -     15404 GA----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5003 39 -     32913 AG----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TATT-A-ACAAG-G-----T-T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15416 39 -     40346 AG----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TATT-A-ACAAG-G-----T-T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15680 39 +    216457 AG----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TATT-A-ACAAG-G-----T-T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15458 40 +     39636 AG----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TATT-A-ACAAG-G-----TTT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16507 39 -     17061 TT----CATAG----GA-TCT-------TA--TG---TGAT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38545 39 -    112038 GT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGCT-A-ACAAG-G-----T-T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4117 39 +     34062 GT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGCT-A-ACAAG-G-----T-T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338859 38 +  18827391 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-GTAAA---G-----T-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5463 38 -     44032 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-GTAAA---G-----T-T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300185 38 - 135778131 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-GTAAA---G-----T-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404716 38 -   2368649 AT----GATAG----CA-TCT-------TA--tg---tgtt---t---at-aca--tttt-ataaa---g-----t-t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373906 38 - 200372422 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4600 38 -      6605 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802841 16 +  53390261 ------------------------------------------------at-aaa--tttt-a-aaa---c-----t-t
i Condylura_cristata.JH655891.1                          I 11 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8425 35 +     10921 AT----GTTA-----GA-TTT-------TA--T--GTT------T---GT-AAA--TTTTTA-GAT---G-----T-T
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 38442 23 -     83289 AC----ATTA-----GC-TTT-------CA--TG---TATT---T---AT-A--------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45367 37 -     47254 AT----TTTA-----GA-TTT-------TA--TGTGTT------T---AT-ACA--TTTCCA-GAA---G-----T-T
i Cryptoprocta_ferox.CryFer_flattened_line_24933         C 0 I 20
s Ctenodactylus_gundi.CteGun_scaffold_65                    640322 37 -   1526836 AT----GTCA-----GA-ATT-------TC--TG---TGCT---T---AT-AAA--TCTTGA-GAA---G-----T-T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288580 38 +  12879189 AC----ATTA-----GA-TTT-------TG--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623590 37 -  35494412 AT----GTCA-----GA-TTT-------TA--TG---T---GTTT---GT-Aaa--ttttca-gaa---g-----t-t
i Delphinapterus_leucas.KZ290073.1                       C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660201 34 -   1390856 -------TTA-----GA-TTT-------ta--tgtgtt------t---at-aaa--ttttca-gaA---G-----T-T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                  134715 37 -    198055 AT----GTTA-----GA-TTT-------TA--TGCGTT------T---AT-AAA--TTTTCA-GAA---G-----T-T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Eidolon_helvum.AWHC01266696.1                               1781 36 +     19438 AT----Gtta-----ca-ttt-------t---tgtgtt------t---at-aaa--ttttca-gaa---g-----t-t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237820 37 -    607251 AT----GATA-----GA-TTT-------TA--TG---T---AATT---AT-AAG--TTTTCA-TAA---G-----C-T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 1
s Ellobius_lutescens.LOEQ01008920.1                          26264 23 +    110024 AT----GTTT-----GA-TGT-------CA--TT---TATT---T---AT-G--------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 4
s Ellobius_talpinus.LOJH01026522.1                            8182 23 +     18970 AT----GTTT-----GA-TGT-------CA--TT---TATT---T---AT-G--------------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 4
s Enhydra_lutris.KZ291758.1                               24905953 36 +  41312741 AT----ATTA-----GA-TTT-------TA--TGCGTT------T---GT-CAG--TTTTCA--AA---G-----T-T
i Enhydra_lutris.KZ291758.1                              C 0 I 20
s Eptesicus_fuscus.JH977646.1                             12573351 37 +  14770903 GT----GTTA-----GA-TTT-------TA--TATGTT------T---AT-GAA--TTTTTA-GAA---G-----T-T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037381 34 -   4378816 AT----ATTA-----GA-TTT-------TA--TG---T------T---Gt-aaa--ttttca-gaa---g-----t-t
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               21371314 34 +  39960074 at----atta-----ga-ttt-------ta--tg---t------t---gt-aaa--ttttca-gaa---g-----t-t
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                              408100 34 -    498745 at----atta-----ga-ttt-------ta--tg---t------t---gt-aaa--ttttca-gaa---g-----t-t
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erythrocebus_patas.Contig38                               258415 38 +  21539334 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-GTAAA---G-----T-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63155 18 -    133382 --------------------------------------------t---gt-aaa--ttttca-gaa---g-----t-t
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 17 I 1
s Eubalaena_japonica.EubJap_flattened_line_118172             3352 37 +      7672 at----gtca-----ga-ttt-------ta--tg---t---gtct---gt-aaa--ttttca-gaa---g-----t-t
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 I 1
s Eulemur_albifrons.k141_51491                               11541 38 -     24895 at----atta-----ga-ctt-------ta--tg---tgtt---t---at-aaatttttt-g-aaa---g-----t-t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39253 38 -     70999 at----atta-----ga-ctt-------ta--tg---tgtt---t---at-aaatttttt-a-aaa---g-----t-t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83213 38 +    112731 at----atta-----ga-ctt-------ta--tg---tgtt---t---at-aaatttttt-a-aaa---g-----t-t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39785 38 +     68309 at----atta-----ga-ctt-------ta--tg---tgtt---t---at-caatttttt-a-aaa---g-----t-t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50110 38 -     65740 AT----ATTA-----GA-CTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20740 38 -     75513 AT----ATTA-----GA-CTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 44933 38 -     97555 AT----ATTA-----GA-CTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1660 38 +     30972 AT----ATTA-----GA-CTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39383 38 -     52037 at----atta-----ga-ctt-------ta--tg---tgtt---t---at-aaatttttt-a-aaa---g-----t-t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55784 38 -    111500 at----atta-----ga-ctt-------ta--tg---tgtt---t---at-aaatttttt-a-aaa---g-----t-t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242384 37 - 206538554 at----ttta-----ga-ttt-------ta--tgtgTT------G---AT-CAA--TTTCCA-GAA---G-----T-T
i Felis_catus.CM001381.2                                 C 0 I 20
s Felis_catus_fca126.CM031415.1                          185112166 37 - 205367284 at----ttta-----ga-ttt-------ta--tgtgTT------G---AT-CAA--TTTCCA-GAA---G-----T-T
i Felis_catus_fca126.CM031415.1                          C 0 I 20
s Felis_nigripes.FelNig_flattened_line_31944                 23514 37 -     30238 AT----TTTA-----GA-TTT-------TA--TGTGTT------G---AT-CAA--TTTCCA-GAA---G-----T-T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 20
s Galeopterus_variegatus.GalVar_scaffold_74466               14723 37 +     18121 AT----ATTG-----CG-TTT-------GA--TA---TATT---T---AT-AAA--TTTTTA-GAA---G-----T-T
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 42
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89495 37 -     95226 at----gata-----ga-ttt-------ta--tg---t---attt---at-aag--tTTTCA-CAA---G-----T-T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 1
s Glis_glis.GliGli_scaffold_33859                            31365 29 -     36801 AC----ATTA-----GA-TTT-------TA--TA---TGTT---T---AT-ACA--TTTT------------------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 7
s Gorilla_beringei.k141_3358147                                527 37 -      8343 AT----GATAG----CA-TCT-------TA--TG---TGTT---C---AT-AAA--TTTT-A-AAA---G-----T-T
i Gorilla_beringei.k141_3358147                          C 0 I 48
s Gorilla_gorilla.LT578336.1                                 66078 37 +  33314783 AT----GATAG----CA-TCT-------TA--Tg---tgtt---c---at-aaa--tttt-a-aaa---g-----t-t
i Gorilla_gorilla.LT578336.1                             I 45 I 469
s Graphiurus_murinus.GraMur_scaffold_90206                   10966 37 +     11903 AC----ATTA-----GA-TTT-------TA--TA---AGTT---T---AT-ACA--TTTTCA-CAA---A-----G-T
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11474 38 -     40692 AT----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32876 38 +     49394 at----atta-----ga-ttt-------ta--tg---tgtt---t---at-aaatttttt-a-aaa---g-----t-t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57744 38 -     66874 at----atta-----ga-ttt-------ta--tg---tgtt---t---at-aaatttttt-a-aaa---g-----t-t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6621 38 -     42923 AT----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13617 38 -     53142 AT----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26290 37 -    327341 AT----CTTA-----GA-TTT-------TA--TGTGTT------T---AT-AAA--TTTCCA-GAA---G-----T-T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 20
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7247 37 +     48891 AT----GATA-----GA-TTT-------TA--TA---T---ATTT---AT-AAG--TTTTCA-TAA---G-----T-T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10747 29 +     12639 AT----GTTA-----CA-TTT-------TA--TG---AGTT---T---A-TAAT--TTTT------------------
i Heterohyrax_brucei.HetBruBak_scaffold_99956            I 1 I 8
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5836 37 -     36432 at----gtta-----ga-ttt-------ta--tg---c---attt---at-aaa--ttttca-gaa---g-----a-t
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 1
s Hipposideros_armiger.JXIK01000431.1                      1545672 37 -   1711038 AT----GTTA-----GA-TTT-------TA--TGTGTT------T---GT-AAG--TTTTTG-GAA---G-----T-T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               44963 37 +     49977 at----gtta-----ga-ttt-------ta--tgtgtt------t---gt-aag--tttttg-taa---g-----t-t
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    137921 37 -    630532 AT----GGTAG----CA-TCT-------TA--TG---TGTT---C---AT-AAA--TTTT-A-AAA---G-----T-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                                949 37 +     12352 AT----GGTAG----CA-TCT-------TA--TG---TGTT---C---AT-AAA--TTTT-A-AAA---G-----T-T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8132 37 +     55766 AT----GGTAG----CA-TCT-------TA--TG---TGTT---C---AT-AAA--TTTT-A-AAA---G-----T-T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047476 37 + 191637585 AT----GGTAG----CA-TCT-------TA--TG---TGTT---C---AT-AAA--TTTT-A-GAA---G-----T-T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796808 37 +  11177569 AT----GGTAG----CA-TCT-------TA--TG---TGTT---C---AT-AAA--TTTT-A-GAA---G-----T-T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2641 35 -    135385 A-----GTTA-----GA--TT-------TA--TG---TGTT---T---AT-AAA--TATTTA-GAA---G-----T-T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374773 40 +   7955117 at----gtta-----ga-ttt-------ca--tg---tttt---tattat-aca--CTTTTA-GAA---G-----T-G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2435083                                     821 38 +      1070 AT----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1372 37 -     16823 at----gtca-----ga-ttt-------ta--tg---t---gttt---gt-aaa--ttttca-gaa---g-----t-t
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 1
s Jaculus_jaculus.JH725527.1                               1232798 38 +   9596543 AT----GTta-----ga-ttt-------ta--tg---tatt---t---at-aaa--tattta-caa---g----CT-T
i Jaculus_jaculus.JH725527.1                             I 205 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 63872 37 -     97402 AT----GTCA-----GA-TTT-------TA--TG---T---GTTT---GT-AAA--TTTTCA-GAA---G-----T-T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 1
s Lagothrix_lagothricha.k141_246028                          39264 37 +    110728 -------ATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----TTT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58853 37 -     65777 GT----GTTA-----GA-TTT-------TA--TATGTT------T---AT-GAA--TTTTCA-GAA---G-----T-T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756266 38 +  30322482 at----atta-----ga-ttt-------ta--tg---tgtt---t---ct-aaatttttt-a-aaa---g-----t-t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        4918 39 -      5330 TT----CTTAG----GA-TCT-------TA--TG---TGAT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16356 39 -     16762 TT----CTTAG----GA-TCT-------TA--TG---TGAT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16654 39 -     17065 TT----CTTAG----GA-TCT-------TA--TG---TGAT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6179 39 -     11567 TT----CATAG----GA-TCT-------TA--TG---TGAT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7560 39 -     12945 TT----CATAG----GA-TCT-------TA--TG---TGAT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          4920 38 +     29618 GT----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4919 38 +     31569 GT----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          4927 38 +     24756 AT----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       4924 38 +     16388 GT----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809038 36 -   3914936 at----gtta-----ga-ttt-------ta--tgtgtt------t---at-caa--ttttca--aa---g-----t-t
i Leptonychotes_weddellii.KB714746.1                     C 0 I 20
s Lepus_americanus.LepAme_scaffold_56121                     11636 34 +     24238 AT-------A-----GA-TTT-------TA--AG---TCTT---T---AT-AAA--GGTTTA-GAA---A-----T-T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             332895 37 +    662738 at----gtca-----ga-ttt-------ta--tg---t---gttt---gt-aaa--ttttca-gaa---g-----t-t
i Lipotes_vexillifer.KE559953.1                          C 0 I 1
s Lophocebus_aterrimus.ctg367                               328595 38 -   1826925 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39075911 29 +  43346337 ac----atta-----ga-ttt-------ta--tg---tgtt---t---a-taac--tttt------------------
i Loxodonta_africana.GL010049.1                          I 1 I 8
s Lycaon_pictus.CM007581.1                                41610223 28 +  59628241 ------------------ttt-------ta--tgtgtt------t---at-caa--ttttca--aa---g-----t-t
i Lycaon_pictus.CM007581.1                               C 0 I 20
s Macaca_arctoides.k141_1757516                              40876 38 -     61512 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368504 38 -  60120075 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20823 38 +     30207 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           17926 38 -     24934 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20710 38 +     30527 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31899 38 -     50087 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41637 38 +     51645 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410211 38 - 187317192 AT----GATAA----CA-TCT-------TA--tg---tgtt---t---at-aca--tttt-ataaa---g-----t-t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395094 38 +  25927173 AT----GATAA----CA-TCT-------ta--tg---tgtt---t---at-aca--tttt-ataaa---g-----t-t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44226 38 -     62418 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                20913 38 +     24253 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40670 38 +     59329 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266502 38 +    668171 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17848 38 +     21031 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31580 38 +     33478 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218853 36 -    270270 AT----GTTA-----GA-TTT-------T---TGTGTT------C---AT-AAA--TTTACA-AAA---G-----T-T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        317978 38 +  24302211 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352810 38 -    752769 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669601 35 -    737560 GT----Gtta-----ga-ttt-------ta--t--gtt------t---at-aaa--tattca-gAC---G-----T-T
i Manis_javanica.JSZB01003497.1                          C 0 I 20
s Manis_pentadactyla.KN006162.1                             216893 37 +    317179 GT----GTta-----ga-ttt-------tatat--gtt------t---at-aaa--tattca-gAT---G-----T-T
i Manis_pentadactyla.KN006162.1                          C 0 I 20
s Marmota_marmota.CZRN01000018.1                           7488873 40 +  40650429 at----gtta-----ga-ttt-------ca--tg---tttt---tattat-aca--ttttta-gaa---G-----T-G
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       145928 38 +    207569 AT----GTTA-----GA-TTT-------TA--TGTGTT------T---GT-AAA--TTCTCC-TAA---G-----TTT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             13965 36 -     74585 AT----ATTA-----GA-ATT-------TA--TGTGTT------T---AT-CAG--TTTTCA--AA---G-----T-T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 20
s Meriones_unguiculatus.MerUng_scaffold_7390                 44781 23 -    140813 AT----ATTA-----GA-TTT-------CA--TG---TATT---T---AT-A--------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 4
s Mesoplodon_bidens.MesBid_scaffold_6114                     79437 37 +     93471 at----gtga-----ga-ttt-------ta--tg---t---gttt---gt-aaa--ttttca-gaa---g-----t-t
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 1
s Mico_argentatus.k141_582562                                 5938 38 +     17804 TT----CATAG----GA-TCT-------TA--TG---TGTT---C---TT-AAA--TGTT-A-AAA-G-G-----T-T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6710 39 -     12984 TT----CATAG----GA-TCT-------TA--TG---TGTT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14673 38 -     26561 TT----CATAG----GA-TCT-------TA--TG---TGTT---C---TT-AAA--TGTT-A-AAA-G-G-----T-T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980524 38 +  93316391 GT----ATTA-----GG-TTT-------TA--tg---tgtt---t---at-aaatttttt-a-aaa---g-----t-t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180172 37 +    200668 AT----GTTA-----GA-TTT-------TG--TGTGTT------T---AT-ACA--TTTTTA-GAA---G-----T-T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 21
s Microtus_ochrogaster.CM001695.1                         15959680 23 +  27267610 GT----GTTA-----GA-TGT-------CA--TA---TATT---T---AT-A--------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 4
s Miniopterus_natalensis.LDJU01000034.1                    6360538 37 -   8254450 AT----GTTA-----GA-TTT-------TA--TGTGTT------T---AT-GAA--TTTTTA-GAG---G-----T-T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 8
s Miniopterus_schreibersii.MinSch_scaffold_23309             39439 37 -     48117 AT----GTTA-----GA-TTT-------TA--TGTGTT------T---AT-GAA--TTTTTA-GAG---G-----T-T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 8
s Miopithecus_ogouensis.k141_1534655                         17889 38 -     27822 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Miopithecus_ogouensis.k141_1534655                     C 0 I 21
s Mirounga_angustirostris.MirAng_flattened_line_54046         4054 36 +     27589 at----gtta-----ga-ttt-------ta--tgtgtt------t---at-caa--ttttca--aa---g-----t-t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 20
s Mirza_zaza.k141_766280                                     48387 37 -     62432 GT----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AA----G-----T-T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351333 37 +    437263 AT----GTCA-----GA-TTT-------TA--TG---T---GTTT---GT-AAA--TTTTCA-GAA---G-----T-T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174344 37 +    366855 AT----GTTA-----GG-TTT-------TA--TGTGTT------T---AT-ACA--TTTTTA-GGA---G-----T-T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 21
s Moschus_moschiferus.MosMos_scaffold_13123                  22393 37 -     82753 AT----GATA-----GA-TTT-------TA--TG---T---ATTT---AT-AAG--TTTTCA-TAA---G-----T-T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_18455                   14067 37 -     63510 AT----TTTA-----GA-TTT-------TA--TGTGTT------T---AT-AAA--TTTCCA-GAA---G-----T-T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 16
s Murina_feae.MurFea_scaffold_17764                          33264 37 +     47283 GT----GTTA-----GA-TTT-------TA--TATGTT------T---AT-GAT--TTTTCA-GAA---G-----T-T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35584897 23 + 120012414 at----gTTA-----GA-TTT-------CA--TG---TATT---T---AT-A--------------------------
i Mus_caroli.LT608237.1                                  C 0 I 4
s Mus_musculus.chr8                                       41679278 23 + 129401213 AT----GTTA-----GA-TTT-------CA--TG---TATT---T---AT-A--------------------------
i Mus_musculus.chr8                                      C 0 I 4
s Mus_pahari.LT608297.1                                   58212911 23 +  89631738 AT----GTTA-----GA-TTT-------CA--TG---TATT---T---AT-A--------------------------
i Mus_pahari.LT608297.1                                  C 0 I 4
s Mus_spretus.CM004101.1                                  39486387 23 + 130317789 AT----GTTA-----GA-TTT-------CA--TG---TATT---T---AT-A--------------------------
i Mus_spretus.CM004101.1                                 C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_12866             80011 37 -     86153 AC----ATTA-----GA-TTT-------TA--TA---TGCT---T---AC-ACA--TTTTTA-CAA---A-----G-T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14342966 36 +  14710649 AT----ATTA-----GA-TTT-------TA--TGCGTT------C---GT-CAG--TTTTCA--AA---G-----T-T
i Mustela_putorius.JH418006.1                            C 0 I 20
s Myotis_brandtii.KE162005.1                               9787713 37 +  10118263 GT----GTTA-----GA-TTT-------TA--TATGTT------T---AT-GAA--TTTTTA-GAA---G-----T-T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378099 37 +   6019432 GT----GTTA-----GA-TTT-------TA--TATGTT------T---AT-GAA--TTTTTA-GAA---G-----T-T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18343 37 -     39439 GT----GTTA-----GA-TTT-------TA--TATGTT------T---AT-GAA--TTTTTA-GAA---G-----T-T
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1657 37 +      3929 GT----GTTA-----GA-TTT-------TA--TATGTT------T---AT-GAA--TTTTTA-GAA---G-----T-T
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108730 28 +    130748 AG----GTTA-----GA-GTT-------CA--TG---TGTT---T---A--TAA--TTTT------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 7
s Nasalis_larvatus.k141_1350636                              24254 38 +     34575 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464450 36 -  31847680 at----gtta-----ga-ttt-------ta--tgtgtt------t---at-caa--ttttca--aa---g-----t-t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 20
s Neophocaena_asiaeorientalis.KZ687982.1                   1225502 37 -   7148211 AT----GTCA-----GA-TTT-------TA--TG---T---GTTT---Gt-aaa--ttttca-gaa---g-----t-t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_7894                   122555 37 -    149072 AT----GTTG-----GA-TTT-------TG--TGTGTT------T---AT-ACA--TTTTTA-GTA---G-----T-T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 23
s Nomascus_annamensis.k141_1771965                           49206 37 -    132029 AT----GGTAG----CA-TCT-------TA--TG---TGTT---C---AT-AAA--TTTT-A-AAA---G-----T-T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5302 37 -     16345 AT----GGTAG----CA-TCT-------TA--TG---TGTT---C---AT-AAA--TTTT-A-AAA---G-----T-T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11185 37 +     22201 AT----GGTAG----CA-TCT-------TA--TG---TGTT---C---AT-AAA--TTTT-A-AAA---G-----T-T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409522 37 -  22158432 AT----GGTAG----CA-TCT-------TA--TG---TGTT---C---AT-AAA--TTTT-A-AAA---G-----T-T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21585 37 -     54323 AT----GGTAG----CA-TCT-------TA--TG---TGTT---C---AT-AAA--TTTT-A-AAA---G-----T-T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193839 28 +   9404916 ------------------TTT-------TA--TGTGTT------T---AT-caa--ttttca--aa---g-----t-t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 20
s Ochotona_princeps.JH802162.1                             2566690 37 -   3988456 AT----AATG-----GA-CTT-------TA--CA---TGCT---T---AT-GAA--GTTTta-gat---g-----t-t
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447223 36 +   2017862 AT----GTta-----ga-ttt-------ta--tgtgtt------t---at-caa--ttttca--aa---g-----t-t
i Odobenus_rosmarus.KB229312.1                           C 0 I 20
s Odocoileus_virginianus.KZ100018.1                         434390 37 -    630418 AT----GATA-----GA-TTT-------TA--TG---T---ATTC---AT-AAG--TTTTCA-TAA---G-----C-T
i Odocoileus_virginianus.KZ100018.1                      C 0 I 1
s Okapia_johnstoni.LVCL01S0005463.1                          12378 37 +    150152 at----gata-----ga-ttt-------ta--tg---t---attt---at-aag--ttttca-caa---g-----t-t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_7387                    85932 23 -    140218 AT----GTTA-----GA-TGT-------CA--TA---TATT---T---AT-A--------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_2487                   103262 23 +    107918 AT----GTTA-----GA-CTT-------CG--TG---TATT---T---AT-G--------------------------
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 I 4
s Orcinus_orca.KB316932.1                                  8094767 37 +  10937097 AT----GTCA-----GA-TTT-------TA--TG---T---GTTT---Gt-aaa--ttttca-gaa---g-----t-t
i Orcinus_orca.KB316932.1                                C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                       107098885 34 - 174332312 AT-------A-----GA-TTT-------TA--AG---CCTT---T---AT-AAA--GGTTTA-GAA---G-----T-T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        34905 28 +    559221 ------------------TTT-------TA--TATGTT------T---AT-caa--ttttca--aa---g-----t-t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 20
s Ovis_aries.CM001607.2                                   26402367 37 -  44047080 at----gata-----ga-ttt-------ta--ta---t---attt---at-aag--tttTCA-TAA---G-----T-T
i Ovis_aries.CM001607.2                                  C 0 I 1
s Ovis_canadensis.OviCan_scaffold_67953                       2886 37 +     17875 AT----GATA-----GA-TTT-------TA--TA---T---ATTT---AT-AAG--TTTTCA-TAA---G-----T-T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 1
s Pan_troglodytes.CM009242.2                               1467409 37 - 189151597 AT----GATAG----CA-TCT-------TA--Tg---tgtt---c---at-aaa--tttt-a-aaa---g-----t-t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20102 37 -    230217 AT----TTTA-----GA-TTT-------TA--TGTGTT------G---AT-CAA--TTTCCA-GAC---G-----T-T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 20
s Panthera_pardus.KV860321.1                              18457428 37 -  18783137 at----ttta-----ga-ttt-------ta--tgtgtT------G---AT-CAA--TTTCCA-GAC---G-----T-T
i Panthera_pardus.KV860321.1                             C 0 I 20
s Panthera_tigris.KE722367.1                               3968157 37 +   8748460 at----ttta-----ga-ttt-------ta--tgtgtT------G---AT-CAA--TTTCCA-GAC---G-----T-T
i Panthera_tigris.KE722367.1                             C 0 I 20
s Pantholops_hodgsonii.KE114653.1                          1613813 37 +   2937107 at----gata-----ga-ttt-------ta--ta---t---attt---at-aag--tttTTA-TAA---G-----T-T
i Pantholops_hodgsonii.KE114653.1                        C 0 I 1
s Papio_anubis.CM001495.2                                   238822 38 - 183742232 AT----GATAA----CA-TCT-------TA--tg---tgtt---t---at-aca--tttt-ataaa---g-----t-t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5289 38 +     21308 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286326 38 -  20919399 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  17942 38 -     27687 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11078 38 +     16796 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17888 38 -     23640 AT----GATAA----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11019 37 +     78924 AT----TTTA-----GA-TTT-------TA--TGTGTT------T---AT-CAA--TTTCCA-GAA---G-----T-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 20
s Peromyscus_maniculatus.KI615324.1                         242929 23 +  18517816 AT----GTTA-----GA-TTT-------CG--TG---TATT---T---AT-G--------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 19
s Phocoena_phocoena.PhoPho_flattened_line_46867              10630 37 -     15039 AT----GTCA-----GA-TTT-------TA--TG---T---GTTT---GT-AAA--TTTTCA-GAA---G-----T-T
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 I 1
s Piliocolobus_badius.k141_2495623                            4708 38 +      7560 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60415 38 -     63152 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43014 38 +     45295 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     693 38 +      5735 AT----GATAG----CA-TCT-------ta--tg---tgtt---t---at-aca--tttt-ataaa---g-----t-t
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45539 37 +     46691 GT----GCTA-----GA-TTT-------TA--TATATT------T---AT-GAA--TTTTTA-GAA---G-----T-T
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             60894 39 +    207309 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-T-AAAAG-G-----T-T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2014 39 -     25401 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27729 39 +     58159 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-T-AAAAG-G-----T-T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28005 39 +     63561 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-T-AAAAG-G-----T-T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27768 39 +     51148 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-T-AAAAG-G-----T-T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552763 37 -   4542175 ------GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27752 39 +     51125 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-T-AAAAG-G-----T-T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2709 37 -      8168 at----gtca-----ga-ttt-------ta--tg---t---gttt---gt-aaa--ttttca-gaa---g-----t-t
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 I 1
s Plecturocebus_bernhardi.k141_2549090                        4185 39 +     39866 AG----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_89578                           3969 34 -      4004 AG----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAA------------
i Plecturocebus_brunneus.k141_89578                      C 0 N 0
s Plecturocebus_caligatus.k141_1382851                       38674 39 -     87950 AG----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39067 39 -     88961 AG----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3767 39 -     39403 AG----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38720 39 +     87928 AG----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3763 39 -     60166 AG----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10699 39 -     67232 AG----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38616 39 -     90634 AG----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40083 39 +     89403 AG----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173026 37 - 189387572 AT----GATAG----CA-TCT-------TA--Tg---tgtt---c---at-aaa--tttt-a-aaa---g-----t-t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188024 37 -   9816681 AT----GATAG----CA-TCT-------TA--TG---TGTT---C---AT-AAA--TTTT-A-AAA---G-----T-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23194 38 +     69807 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40389 38 -     80239 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7904 29 +     14086 AT----GTTA-----CA-TTT-------TA--TG---AGTT---T---A-TAAT--TTTT------------------
i Procavia_capensis.ProCapCap_scaffold_121686            I 1 I 8
s Prolemur_simus.MPIZ01000396.1                            1979424 38 +   4620579 AG----ATTa-----ga-ttt-------ta--tg---tgtt---t---at-aaatttttt-a-aaa---g-----t-t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562006 38 -   2598838 AT----ATTA-----ga-ttt-------ta--tg---tgtt---t---at-aaatttttt-a-aaa---g-----t-t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79093 38 -     79582 AT----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              244 42 -     11706 AT----ATTA-ATTAGA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            3979 42 -     30655 ATATTAATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30308 38 +     46564 AT----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90599 38 -     98465 at----atta-----ga-ttt-------ta--tg---tgtt---t---at-aaatttttt-a-aaa---g-----t-t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4221 38 +     35169 at----atta-----ga-ttt-------ta--tg---tgtt---t---at-aaatttttt-a-aaa---g-----t-t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            32275 23 +     52041 AT----ATTA-----GA-TTT-------CA--TG---TATT---T---GT-A--------------------------
i Psammomys_obesus.NESX01036366.1                        C 0 I 4
s Pteronotus_parnellii.KE847780.1                            47423 37 -     66298 ct----gtta-----ga-ttt-------ta--tgtgtt------t---at-aca--ttttta-gaa---g-----t-t
i Pteronotus_parnellii.KE847780.1                        C 0 I 21
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4104 36 -     10349 AT----ATTA-----GA-TTT-------TA--TGCATT------T---AT-CAG--TTTTCA--AA---G-----T-T
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 I 20
s Pteropus_alecto.KB030862.1                               5836324 36 -  28871421 AT----GTta-----ga-ttt-------t---tgtgtt------t---at-aaa--ttttca-aaa---g-----t-t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3532900 36 -   4952924 AT----GTta-----ga-ttt-------t---tgtgtt------t---at-aaa--ttttca-aaa---g-----t-g
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18094980 37 +  38429054 at----ttta-----ga-ttt-------ta--tgtgtT------G---AT-CAA--TTTCCA-GAA---G-----T-T
i Puma_concolor.QAVW01001104.1                           C 0 I 20
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51347 37 +     55069 AT----GATA-----GA-TTT-------TA--TG---T---ATTC---AT-AAG--TTTTCA-TAA---G-----C-T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 1
s Rattus_norvegicus.chr16                                 37011620 23 -  90668790 AC----GTTA-----GA-TGT-------CA--TG---CATT---T---AT-A--------------------------
i Rattus_norvegicus.chr16                                C 0 I 4
s Rhinolophus_sinicus.LVEH01000134.1                       2908441 31 +   3329780 at----gtta-----ga-ttt-------ta--tgcatt------t---at-aaa--ttttca----------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 3
s Rhinopithecus_bieti.k119_221883                            24412 38 +     27361 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117771 38 + 195417433 AT----GATAG----CA-TCT-------TA--tg---tgtt---t---at-aca--tttt-ataaa---g-----t-t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232020 38 -   7961872 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70375 36 -    116970 AT----GTTA-----GG-TTT-------T---TGTGTT------T---AT-AAA--TTTTCA-AAA---G-----T-T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 15
s Saguinus_bicolor.k141_1125626                              16410 39 +     16959 TT----CATAG----GA-TCT-------TA--TG---TGAT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38260 39 +     72255 TT----CGTAG----GA-TCT-------TA--TG---TGAT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            10901 39 +     11432 TT----CATAG----AA-TCT-------TA--TG---TGAT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16276 39 -     16755 TT----CATAG----GA-TCC-------TA--TG---TGAT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14846 39 -     15289 TT----CATAG----GA-TCT-------TA--TG---TGAT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386842 39 - 209938924 TT----CATAG----GA-TCT-------TA--TG---TGAT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7707 39 +     22212 TT----CATAG----GA-TCT-------TA--TG---TGAT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16204 39 +     39756 TT----CGTAG----GA-TCT-------TA--TG---TGAT---C---TT-AAA--TGTT-A-AAAAG-G-----T-T
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        5953 37 +     16473 AT----GATA-----GA-TTT-------TA--TG---T---GTTT---AT-AAG--CTTTCA-TAA---G-----T-T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 1
s Sapajus_apella.ctg103                                     234392 39 +   5703754 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           3982 39 +     21866 AT----GATAG----GA-TCT-------TA--TG---TGTT---C---AT-AAA--TGTT-A-AAAAG-G-----T-T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111923 17 +    313613 ------------------------------------------------AT-AAA--TTTTCA-AAA---G-----T-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 11 C 0
s Semnopithecus_entellus.k141_158471                         20902 38 +     27374 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATGAA---G-----T-T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24417 38 +     58920 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           10914 38 -     45317 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18571 38 -     42441 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21253 38 -     29113 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATGAA---G-----T-T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24325 38 -     48123 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    44216 23 +     77746 AT----GGTA-----GA-TTT-------GG--TA---TAGT---T---AT-G--------------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 4
s Solenodon_paradoxus.SolPar_flattened_line_126            1854108 17 -   1910179 ------------------------------------------------AT-ACA--CTTATA-AAA---G-----T-T
i Solenodon_paradoxus.SolPar_flattened_line_126          I 12 C 0
s Spermophilus_dauricus.KZ294078.1                         1855083 40 +   3870691 at----gtta-----ga-ttt-------ca--tg---tttt---tattat-aca--ttttta-gaa---G-----T-G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              1969 34 -     97271 AT----GTTA-----GA-TTT-------TA--T--GTT------T---AT-CCA--TTTCCA--AA---G-----T-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 20
s Suricata_suricatta.SurSur_flattened_line_6629             120659 37 +    196729 AT----TTTA-----GA-TTT-------TA--TGTGTT------T---AT-AAA--TTTCCA-GAA---G-----T-T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 20
s Sus_scrofa.CM000828.4                                    6639429 12 +  69701581 AT----ATTA-----GT-TTT-------T-------------------------------------------------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386498 37 +   1523678 AT----GGTAG----CA-TCT-------TA--TG---TGTT---C---AT-AAA--TTTT-A-AAA---G-----T-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11016 37 +     22964 GT----GTTA-----GA-TTT-------TA--TGGGTT------T---GT-GAA--TTTTTA-GAG---G-----T-T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                23687 28 -     25844 AT----GTTA-----GA-GTT-------CA--TA---TGCT---T---A--TAA--TTTT------------------
i Tamandua_tetradactyla.TamTet_scaffold_67439            C 0 I 5
s Tapirus_indicus.TapInd_scaffold_7432                      187156 37 +    199430 at----gtta-----ga-ctt-------ta--tatgtt------t---aa-aat--ttttca-gaa---g-----t-t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    101111 37 -    539355 AT----GTTA-----GA-CTT-------TA--TATGTT------T---AA-AAT--TTTTCA-GAA---G-----T-T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_1780720                                2864 41 +      6850 GT----GTTA-----GA-TTT-------TA--TG---TGTT---T---GT-CAA--TTTT-T-AAA---AGATTTT-T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                2949 41 +     20590 GT----GTTA-----GA-TTT-------TA--TG---TGTT---T---GT-CAA--TTTT-T-AAA---AGATTTT-T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348807 38 - 186847797 AT----GATAA----CA-TCT-------TA--tg---tgtt---t---at-aca--tttt-ataaa---g-----t-t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475210 37 -    610378 AT----GTTA-----GA-TTT-------TG--TGGGCT------T---AT-ACA--TTTTTA-GAA---G-----T-T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 21
s Trachypithecus_auratus.k141_1189070                        16466 38 +     26378 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29147 38 -     78344 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15787 38 +     25722 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24010 38 -     62838 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24129 38 +     46913 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          4937 38 -     28527 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      25949 38 -     64340 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          23986 38 -     63452 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5428 38 +     22490 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3048 38 +      4141 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5854 38 -     13050 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251091 38 -   6242583 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56823 38 +     59866 AT----GATAG----CA-TCT-------TA--TG---TGTT---T---AT-ACA--TTTT-ATAAA---G-----T-T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478543 29 -  10818551 AC----GTTA-----GA-TTT-------TA--CG---TGTT---G---A-Taaa--tttt------------------
i Trichechus_manatus.JH594705.1                          I 1 I 22
s Tupaia_chinensis.KB320699.1                              1825474 37 -   4065304 AT----GTTa-----ga-ttt-------ta--tg---tgta---t---at-aaa--attctA-CAA---G-----T-T
i Tupaia_chinensis.KB320699.1                            C 0 I 8
s Tupaia_tana.TupTan_flattened_line_394                       2869 37 -     70247 AT----GTTA-----GA-TTT-------TA--TG---TGTA---T---AT-AAA--ATTCTA-CAA---G-----T-T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 8
s Tursiops_truncatus.MRVK01000835.1                       17359506 37 -  33153633 at----gtca-----ga-ttt-------ta--tg---t---gttt---gt-aaa--ttttca-gaa---g-----t-t
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_7153                   103349 17 -    105689 ------------------------------------------------AT-AAA--TTTTCA-GAA---G-----T-T
i Uropsilus_gracilis.UroGra_scaffold_7153                I 20 C 0
s Ursus_maritimus.KK499267.1                                177193 36 +   5085361 at----gtta-----ga-ttt-------ta--tgtgtt------t---at-caa--ttttca--aa---g-----t-t
i Ursus_maritimus.KK499267.1                             C 0 I 20
s Varecia_rubra.k141_787544                                  21054 38 -     30710 ag----atta-----ga-ttt-------ta--tg---tgtt---t---at-aaatttttt-a-aaa---g-----t-t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              19962 38 -    147434 AG----ATTA-----GA-TTT-------TA--TG---TGTT---T---AT-AAATTTTTT-A-AAA---G-----T-T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74596 37 +   5488506 at----gtta-----ga-ttc-------ta--ca---t---gtct---at-aaa--ctttca-gaa---g-----t-t
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_12041                100585 28 -    112863 ------------------TTT-------TA--TGTGTT------T---AT-CAA--TTTTCG--AA---C-----T-T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 20
s Xerus_inauris.XerIna_scaffold_2302                        162060 37 -    224448 AT----GTTA-----GA-TTT-------CA--TG---TGTC---T---AT-ATG--TTTTTA-GAA---G-----T-T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24442 36 -     86975 AT----GTTA-----GA-TTT-------TA--TGTGTT------T---AT-CAA--TTTTCA--AA---G-----T-T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 20
s Zapus_hudsonius.ZapHud_scaffold_209943                       206 32 -      3146 ---------A-----TA-TTT-------AG--TG---TATT---T---AT-AAA--TATTTA-GAA---G-----T-T
i Zapus_hudsonius.ZapHud_scaffold_209943                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2660542            161 37 +       358 at----gtca-----ga-ttt-------ta--tg---t---gttt---gt-aaa--ttttca-gaa---g-----t-t
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      C 0 I 1
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542  0 +     83186 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        206 48 +     36723 G-TT--TT-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----AG-AA-A------A-ACTTTT--------------TTCT-----GG
s Acinonyx_jubatus.LLWD01001279.1                           808782 22 +   1699592 ---------------------------------------------------------TG----TTTATG-AA-A------A-A--TCT--------------TTGT-----GG
i Acinonyx_jubatus.LLWD01001279.1                        I 20 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410566 22 +  29979442 ---------------------------------------------------------TG----TTTATG-AT-C------A-G--TCT--------------TTGC-----GG
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 20 C 0
s Ailurus_fulgens.LNAC01001112.1                            211470 22 +    347723 ---------------------------------------------------------tg----tttatg-aa-a------a-a--tat--------------ttgt-----gg
i Ailurus_fulgens.LNAC01001112.1                         I 20 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    10433 21 -     61208 T-TTATCA-TGCAT--TA--TATTTC-----T---------------------------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 8
s Allenopithecus_nigroviridis.k141_3755588                   43517 48 +     53615 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AG-A------A-ATGTTT--------------TTCT-----AG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39332 48 +     44087 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AG-A------A-ATGTTT--------------TTTT-----AG
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68254 49 -     84148 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTA----TCAAA-A------A-ATGTTT--------------TACT-----GG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40477 49 -     78289 T-TT--TA-C--TA--CG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39925 49 +     55831 T-TT--TA-C--TA--CG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38366 49 -     64179 T-TT--TA-C--TA--CG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20009 49 -     24835 T-TT--TA-C--TA--CG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             36992 49 +     45454 T-TT--TA-C--TA--CG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42691 49 +     70886 T-TT--TA-C--TA--CG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4818 49 +     30854 T-TT--TA-C--TA--CG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             28957 49 +     42133 T-TT--TA-C--TA--CG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583470 45 +   2318259 --CT--CA-C--TA--T-GT-GGCCTA----AT----TTATCA-GT------T----TA--------TG-AA-C------A-G--TTT--------------TTCT-----TT
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172223 19 -    412891 ----------------------------------------------------T----TG--------TG-AG-C------A-A--TTT--------------TTCT-----AG
i Anoura_caudifer.AnoCau_scaffold_1412                   I 21 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48566 45 -     68529 --CT--CA-C--TA--T-GT-GGTCTA----AT----TTCTTG-GT------T----TG--------TG-AC-C------T-G--TTT--------------TTCT-----TT
i Antilocapra_americana.AntAmePen_scaffold_21030         I 1 C 0
s Aotus_azarae.k141_118258                                   46761 50 -     65372 T-TT-TTG-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40509 50 +     43593 T-TT-TTA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668519 50 +   5030052 t-tt-tta-c--tA--TG--TGATCTT----TT----TT-----AT------T----AGCTtg----tgaaa-a------a-atgttt--------------tact-----gg
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20161 50 -     23494 T-TT-TTA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5297 50 +      8415 T-TT-TTA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5736 16 -     32367 -------------------------------------------------------------------AG-AA-T------A-G--ATT--------------TTCT-----GG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_859459                  181 19 -       293 ----------------------------------------------------T----TG--------TG-AA-C------A-A--TTT--------------TTCT-----AG
i Artibeus_jamaicensis.ArtJam_scaffold_859459            I 21 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270754 48 +  21539123 T-T---TA-C--TA--CG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-CTGTTT--------------TACT-----GG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6925 48 +     48076 T-T---TA-C--TA--CG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-CTGTTT--------------TACT-----GG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2060 47 -     28759 T-T---TA-C--TA--CG--TGATCTT----TT----TT-----AT------T----TGCTTG----TG-AA-A------T-CTGTTT--------------TACT-----GG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29611 48 +     44353 T-T---TA-C--TA--CG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-CTGTTT--------------TACT-----GG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              44986 48 -     71267 T-T---TA-C--TA--CG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-CTGTTT--------------TACT-----GG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19042 48 -     33135 T-T---TA-C--TA--CG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-CTGTTT--------------TACT-----GG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2179 46 +     11645 C-TT--TA-C--TA--TG--TGATCTG----AT----TT-----GT------T----TGCTTG----TG-AG-C------A-A--TTT--------------TTCT-----GG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2181 46 -     19611 C-TT--TA-C--TA--TG--TGATCTG----AT----TT-----GT------T----TGCTTG----TG-AG-C------A-A--TTT--------------TTCT-----GG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955295 45 -  23207421 --tt--ca-c--ca--t-gt-ggtcta----atttattt-----gt------t----tg--------tg-aa-c------a-g--ttt--------------ttct-----gg
i Balaenoptera_acutorostrata.KI537508.1                  I 1 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2503 45 -      4711 --tt--ca-c--ca--t-gt-ggtcta----atttattt-----gt------t----tg--------tg-aa-c------a-g--ttt--------------ttct-----gg
i Balaenoptera_bonaerensis.DF507193.1                    I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84464 45 +    124022 --CT--CA-C--TA--T-GT-GGCCTA----AT----TTATCA-GT------T----TA--------TG-AA-C------A-G--TTT--------------TTCT-----TT
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 1 C 0
s Bison_bison.KN261452.1                                     19995 45 +    288883 --CT--CA-C--CA--T-GT-GGTCTA----AT----TTATTG-GT------T----TG--------TG-AA-C------T-G--TTT--------------TTCT-----TT
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003047.1                                  20354382 45 +  48749331 --CT--CA-C--CA--T-GT-GGTCTA----AT----TTATTG-GT------T----TG--------TG-AA-C------T-G--TTT--------------TTCT-----TT
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                      752950 45 +   1948126 --CT--CA-C--CA--T-AT-GGTCTA----AT----TTATTG-GT------T----TG--------tg-aa-c------t-g--ttt--------------ttct-----tt
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000203.6                                   27543089 45 -  45695690 --CT--CA-C--CA--T-GT-GGTCTA----AT----TTATTG-GT------T----TG--------tg-aa-c------t-g--ttt--------------ttct-----tt
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               1528111 45 -   4408762 --CT--CA-C--CA--T-GT-GGTCTA----AT----TTATTG-GT------T----Ta--------tg-aa-c------t-g--ttt--------------ttct-----tt
i Bubalus_bubalis.KI419123.1                             I 1 C 0
s Cacajao_ayresi.k141_96119                                   3944 49 +     28062 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39239 49 -     91139 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16764 49 +     95584 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16677 49 +    119600 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5869 49 -     13885 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14554 50 +     17162 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------AAATGTTT--------------TACT-----GG
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449510 50 + 189096842 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------AAATGTTT--------------TACT-----GG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15803 50 -     18408 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------AAATGTTT--------------TACT-----GG
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629295 39 +  17673402 --tt--ca-c--ta--t----ggtcta----at----tt-----at------t----tc--------tg-aa-c------a-g--ttt--------------ttct-----gg
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           4663581 39 +   7040546 --tt--ca-c--ta--t----ggtcta----at----tt-----at------t----tc--------tg-aa-c------a-g--ttt--------------ttct-----gg
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                 1207241 39 +   1652518 --tt--ca-c--ta--t----ggtcta----at----tt-----at------t----tc--------tg-aa-c------a-g--ttt--------------ttct-----gg
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           42501000 22 +  60362399 ---------------------------------------------------------TG----TTTACG-AA-C------A-A--TCT--------------TTGT-----GG
i CanFam4.chr16                                          I 20 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4630 22 -     23171 ---------------------------------------------------------TG----TTTACG-AA-C------A-A--TCT--------------TTGT-----GG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 20 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          217991 22 +   9314153 ---------------------------------------------------------TG----TTTACG-AA-C------A-A--TCT--------------TTGT-----GG
i Canis_lupus_dingo.QKWQ01000480.1                       I 20 C 0
s Canis_lupus_familiaris.chr16                            41611116 22 +  59632846 ---------------------------------------------------------tg----tttacg-aa-c------a-a--tct--------------ttgt-----gg
i Canis_lupus_familiaris.chr16                           I 20 C 0
s Canis_lupus_orion.HG994398.1                            45102686 22 -  63665305 ---------------------------------------------------------TG----TTTACG-AA-C------A-A--TCT--------------TTGT-----GG
i Canis_lupus_orion.HG994398.1                           I 20 C 0
s Capra_aegagrus.CM003241.1                               27407181 45 -  46296322 --CT--CA-C--TA--T-GT-GGCTTA----AT----TTATCA-GT------T----TA--------TG-AA-C------A-G--TTT--------------TTCT-----TT
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 26589454 45 +  44709034 --CT--CA-C--TA--T-GT-GGCTTA----AT----TTATCA-GT------T----TA--------TG-AA-C------A-G--TTT--------------TTCT-----TT
i Capra_hircus.CM004588.1                                I 1 C 0
s Carlito_syrichta.NW_007259797.1                           265305 45 +    496798 c-t---ta-c--TA--TA--TGGTCTG----AT----TT-----AT------T----TACTTG----TG-AA-C------A-AT-TTT--------------C-CT-----GG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                121 19 +      5315 ----------------------------------------------------T----TG--------TG-AA-C------A-C--TTT--------------TTCT-----AG
i Carollia_perspicillata.CarPer_scaffold_170178          I 21 C 0
s Castor_canadensis.CasCan_scaffold_39952                    18132 29 -     39886 ---------------------GTTTT-----AT----TT-----AT------T----TG--------TG-AA-C------A-G--TTT--------------T-CT-----GG
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     74971 14 -    217609 --------------------------------------------------------------------T-GT-C------A-G---TC--------------TTAT-----GG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1089 49 -     12580 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------AAATGTTT--------------T-CT-----GG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               38974 50 +     53515 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------AAATGTTT--------------TACT-----GG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367207 49 -  26074798 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4096 49 -     34880 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63191 49 -     89041 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13576 45 -     50533 T-T---TA-C--TA--TA--TGGTCTG----AT----TT-----AT------T----TGCTTG----TG-AA-C------A-AT-TTT--------------C-CT-----GG
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15487944 44 -  27778364 --tt--CA-T--GA--TG--TGGTTTG----AT----TT-----AT------T----CG----TTTCTG-AA-C------A-A--TTT--------------TT-T-----GG
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14777 44 +     27315 --TT--CA-T--GA--TG--TGGTTTG----AT----TT-----AT------T----CG----TTTCTG-AA-C------A-A--TTT--------------TT-T-----GG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 1 C 0
s Cercocebus_atys.KQ010504.1                                136677 48 -   4669795 g-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCttg----tg-aa-a------a-atgttt--------------ttct-----ag
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40418 48 +     47900 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40250 48 -     44860 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40232 48 -    148725 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23218 48 -     40656 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----CG-AG-A------A-ATGTTT--------------TTCT-----AG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3226 48 +     20796 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----CG-AG-A------A-ATGTTT--------------TTCT-----AG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7481 48 -     17524 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AG-A------A-ATGTTT--------------TTCT-----AG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23173 48 -     34525 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AG-A------A-ATGTTT--------------TTCT-----AG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7893 48 -     25376 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AG-A------A-ATGTTT--------------TTCT-----AG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360370 48 -  39242232 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AG-A------A-ATGTTT--------------TTCT-----AG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266198 48 +  21565898 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AG-A------A-ATGTTT--------------TTCT-----AG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27644 48 -     45857 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AG-A------A-ATGTTT--------------TTCT-----AG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23435 48 -     32606 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AG-A------A-ATGTTT--------------TTCT-----AG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27084 48 +     27662 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----CG-AG-A------A-ATGTTT--------------TTCT-----AG
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21134 48 +     70610 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AG-A------A-ATGTTT--------------TTCT-----AG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         17999 48 +     36323 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AG-A------A-ATGTTT--------------TTCT-----AG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             2174 29 -     19938 ----------------------ATTTG-----T----TT-----AT------T----TG--------TG-AA-C------A-A--TTC--------------TGAT-----AG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        N 0 C 0
s Cheirogaleus_major.k141_666340                             26601 46 -     33796 C-TT--TA-C--TA--GG--TGGTCCA----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              795 46 -     15404 C-TT--TA-C--TA--GG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5042 48 -     32913 T-TT--TA-C--TA--TG--TGATCTT----TC----TC-----AT------T-----GCTTG----TGAAA-A------A-ATGTTT--------------TATT-----GG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15455 48 -     40346 T-TT--TA-C--TA--TG--TGATCTT----TC----TC-----AT------T-----GCTTG----TGAAA-A------A-ATGTTT--------------TATT-----GG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15719 48 +    216457 T-TT--TA-C--TA--TG--TGATCTT----TC----TC-----AT------T-----GCTTG----TGAAA-A------A-ATGTTT--------------TATT-----GG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15498 48 +     39636 T-TT--TA-C--TA--TG--TGATCTT----TC----TC-----AT------T-----GCTTG----TGAAA-A------A-ATGTTT--------------TATT-----GG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16546 49 -     17061 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38584 48 -    112038 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----T-AAA-A------A-ATGTTT--------------TACT-----GG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4156 48 +     34062 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----T-AAA-A------A-ATGTTT--------------TACT-----GG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338897 48 +  18827391 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------G----TGCTTG----TG-AG-A------A-ATGTTT--------------TTCT-----AG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5501 48 -     44032 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AG-A------A-ATGTTT--------------TTCT-----AG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300223 48 - 135778131 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AG-A------A-ATGTTT--------------TTCT-----AG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404754 48 -   2368649 g-tt--ta-c--ta--tg--tgatctc----at----tt-----at------t----tgcttg----tg-aa-a------a-atgttt--------------ttct-----ag
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373944 48 - 200372422 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4638 48 -      6605 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802857 23 +  53390261 t--t--ca-t--ta--tg--TGGCCAG----AT----TA-----AT------T------------------------------------------------------------
i Condylura_cristata.JH655891.1                          C 0 I 16
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8460 49 +     10921 --T---TT-C--C-TTTA--CGGTCTG----AT----TT-----ATTC-AC-TATGGTC--------TC-AG-C------A-A--TTT--------------TTAT-----GG
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 38469 42 -     83289 T-TT--CA-T--CA--TG--TGTTTT-----AT----TT-T---TT------T----TG--------TG-GT-C------A-G--TTT--------------TCAT-----GA
i Cricetomys_gambianus.CriGam_scaffold_14425             I 4 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45424 22 -     47254 ---------------------------------------------------------TG----TTCACG-AA-C------A-A--TTG--------------TTGT-----GG
i Cryptoprocta_ferox.CryFer_flattened_line_24933         I 20 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    640359 24 -   1526836 T-TT--CA-C--TA--TG--GAGTTT-TGGAAT----TT--------------------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 2102
s Dasypus_novemcinctus.JH564415.1                          2087253 29 -   2246927 ----------------------ACTTG-----T----TT-----AT------T----TG--------TG-AA-C------A-A--CTC--------------TGAT-----AG
i Dasypus_novemcinctus.JH564415.1                        N 0 C 0
s Daubentonia_madagascariensis.ctg71                        288618 46 +  12879189 C-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTA----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623628 45 -  35494412 --tt--ca-C--CA--T-Gt-agtata----atttattt-----gt------t----tg--------tg-aa-A------A-G--TTT--------------TTCT-----GG
i Delphinapterus_leucas.KZ290073.1                       I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660238 39 -   1390856 ------------GA--TG--TGGtttg----at----tt-----at------t----tg----tttctg-AA-C------A-A--TTT--------------TT-T-----GG
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134753 44 -    198055 --TT--CA-T--GA--TG--TGGTTTG----AT----TT-----AT------T----TG----TTTCTG-AA-C------A-A--TTT--------------TT-T-----GG
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Eidolon_helvum.AWHC01266696.1                               1817 49 +     19438 --tt--tt-a--C---TG--TGGTCTG----AT----TT-----ATTC-AA-TATGATC--------TG-AA-C------AAA--TTT--------------TTCT-----GG
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237858 45 -    607251 --CT--CA-C--TA--T-GT-GGTCTA----AT----TTA-CTGGT------T----TG--------TG-AC-C------A-G--TTT--------------TTCT-----TT
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 C 0
s Ellobius_lutescens.LOEQ01008920.1                          26291 40 +    110024 --tt--ca-a--ca--ta--tatttt-----at----tt-----ct------t----tg--------tg-gc-T------A-A--TTT--------------TCAT-----GA
i Ellobius_lutescens.LOEQ01008920.1                      I 4 C 0
s Ellobius_talpinus.LOJH01026522.1                            8209 40 +     18970 --tt--ca-a--ca--ta--tatttt-----at----tt-----ct------t----tg--------tg-gc-t------A-G--TTT--------------TCAT-----GA
i Ellobius_talpinus.LOJH01026522.1                       I 4 C 0
s Enhydra_lutris.KZ291758.1                               24906009 22 +  41312741 ---------------------------------------------------------TG----TTTATG-AA-C------A-A--TAT--------------TTGT-----GG
i Enhydra_lutris.KZ291758.1                              I 20 C 0
s Eptesicus_fuscus.JH977646.1                             12573388 49 +  14770903 --TT--T--A--C---TG--TGGTCTG----AT----TT-----ATTT-GT-t----tg--------ca-aa-c------a-a--ttt--------ttttttttct-----ga
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037416 44 -   4378816 --tt--ca-C--TA--T---TGGtatg----at----tt-----at------t----tg----tttgtg-aA-C------A-A--TTT--------------TTCT-----GG
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               21371349 45 +  39960074 --tt--ca-c--ta--tg--tggtatg----at----tt-----ac------t----tg----tttgtg-aa-c------a-a--ttt--------------ttct-----gg
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                              408135 45 -    498745 --tt--ca-c--ta--tg--tggtatg----at----tt-----ac------t----tg----tttgtg-aa-c------a-a--ttt--------------ttct-----gg
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erythrocebus_patas.Contig38                               258453 48 +  21539334 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AG-A------A-ATGTTT--------------TTCT-----AG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63174 45 -    133382 --tt--ca-c--ca--t-gt-ggtcta----atttattt-----gt------t----tg--------tg-aa-c------a-g--ttt--------------ttct-----gg
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3390 45 +      7672 --tt--ca-c--ca--t-gt-ggtcta----atttattt-----gt------t----tg--------tg-aa-c------a-g--ttt--------------ttct-----gg
i Eubalaena_japonica.EubJap_flattened_line_118172        I 1 C 0
s Eulemur_albifrons.k141_51491                               11579 46 -     24895 t-tt--ta-c--ta--tg--tggtctg----at----tt-----gt------t----tgcttg----tg-aa-c------a-a--ttt--------------ttct-----gg
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39291 46 -     70999 t-tt--ta-c--ta--tg--tggtctg----at----tt-----gt------t----tgcttg----tg-aa-c------a-a--ttt--------------ttct-----gg
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83251 46 +    112731 t-tt--ta-c--ta--tg--tggtctg----at----tt-----gt------t----tgcttg----tg-aa-c------a-a--ttt--------------ttct-----gg
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39823 46 +     68309 t-tt--ta-c--ta--tg--tggtctg----at----tt-----gt------t----tgcttg----tg-aa-c------a-a--ttt--------------ttct-----gg
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50148 46 -     65740 T-TT--TA-C--TA--TG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20778 46 -     75513 T-TT--TA-C--TG--TG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 44971 46 -     97555 T-TT--TA-C--TA--TG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1698 46 +     30972 C-TT--TA-C--TA--TG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39421 46 -     52037 t-tt--ta-c--ta--tg--tggtctg----at----tt-----gt------t----tgcttg----tg-aa-c------a-a--ttt--------------ttct-----gg
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55822 46 -    111500 t-tt--ta-c--ta--tg--tggtctg----at----tt-----gt------t----tgcttg----tg-aa-c------a-a--ttt--------------ttct-----gg
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242441 22 - 206538554 ---------------------------------------------------------TG----TTTATG-AA-A------A-A--TCT--------------TTGT-----GG
i Felis_catus.CM001381.2                                 I 20 C 0
s Felis_catus_fca126.CM031415.1                          185112223 22 - 205367284 ---------------------------------------------------------TG----TTTATG-AA-A------A-A--TCT--------------TTGT-----GG
i Felis_catus_fca126.CM031415.1                          I 20 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23571 22 -     30238 ---------------------------------------------------------TG----TTTATG-AA-A------A-A--TCT--------------TTGT-----GG
i Felis_nigripes.FelNig_flattened_line_31944             I 20 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               2858 42 +      5976 T-TT--TA-C--TA--TG--TGGCCTG----AT----TT-----AT------T----TG--------TA-AA-T------A-A--TTT--------------TTCT-----GG
i Galeopterus_variegatus.GalVar_scaffold_132127          I 97 I 62
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89533 45 -     95226 --CT--CA-C--TA--G-GT-GGTCTA----AT----TTATTG-GT------T----TG--------CG-AC-C------A-G--TTT--------------TTCT-----TT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 1 C 0
s Glis_glis.GliGli_scaffold_33859                            31401 41 -     36801 T-TT--CA-C--TC--TG--TGGTTT-----AT----TT-----CT------T----TG--------TG-AA-C------A-A--TTT--------------TCCT-----GG
i Glis_glis.GliGli_scaffold_33859                        I 7 C 0
s Gorilla_beringei.k141_3358224                                564 48 -      1229 G-TT--TT-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----AG-AA-A------A-ACTTTT--------------TTCT-----GG
i Gorilla_beringei.k141_3358224                          I 144 I 4
s Gorilla_gorilla.LT578341.1                                250058 48 - 186649187 g-tt--tt-c--ta--tG--TGATCTG----AT----TT-----AT------T----TGCTTG----AG-AA-A------A-ACTTTT--------------TTCT-----GG
i Gorilla_gorilla.LT578341.1                             I 37 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11003 41 +     11903 T-TT--CA-C--TC--TG--TGGTTT-----AT----TT-----CT------T----TG--------TG-AA-C------A-A--TAT--------------TCCT-----GG
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11512 46 -     40692 C-TT--TA-C--TA--TG--TGGTCTG----AT----TT-----GT------T----CGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32914 46 +     49394 c-tt--ta-c--ta--tg--tggtctg----at----tt-----gt------t----tgcttg----tg-aa-c------a-a--ttt--------------ttct-----gg
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57782 46 -     66874 c-tt--ta-c--ta--tg--tggtctg----at----tt-----gt------t----tgcttg----tg-aa-c------a-a--ttt--------------ttct-----gg
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6659 46 -     42923 C-TT--TA-C--TA--TG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13655 46 -     53142 C-TT--TA-C--TA--TG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26347 22 -    327341 ---------------------------------------------------------TG----TGTATG-AA-C------C-A--TCT--------------TTGT-----GG
i Helogale_parvula.HelPar_flattened_line_2585            I 20 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7285 45 +     48891 --CT--CA-C--TA--T-GT-GGCCTA----AT----TTATCA-GT------T----TA--------TG-AA-C------A-G--TTT--------------TTCT-----TT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10784 42 +     12639 T-TT--CA-G--TA--TG--GGGTCTG----AT----TT-----GT------T----TG--------TG-GG-C------A-G--CTT--------------TTCT-----GG
i Heterohyrax_brucei.HetBruBak_scaffold_99956            I 8 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5874 45 -     36432 --tt--ca-c--ta--t-gt-gatcta----atttattt-----ct------t----tg--------tg-aa-c------a-g--ttt--------------tttt-----gg
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545709 48 -   1711038 --T---TTCA--C---TA--TGGTACG----AT----TT-----ATTC-AT-TATGGTC--------TG-AA-C------A-A--TTT--------------TTCT-----GG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45000 48 +     49977 --t---ttca--c---ta--tggtatg----at----tt-----attc-ac-tatggtc--------tg-aa-c------a-a--ttt--------------ttct-----gg
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    137958 48 -    630532 G-CT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TC-AA-A------A-ACGTTA--------------TTCT-----GG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                                986 48 +     12352 G-CT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ACGTTA--------------TTCT-----GG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8169 48 +     55766 G-CT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ACGTTA--------------TTCT-----GG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047513 48 + 191637585 G-CT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ACGTTA--------------TTCT-----GG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796845 48 +  11177569 G-CT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ACGTTA--------------TTCT-----GG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2676 41 -    135385 T-TT--CA-T--GA--TG--TGGTTT-----AT----TT-----TT------A----TG--------TG-AA-C------G-A--CTT--------------TTCT-----AG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374813 41 +   7955117 T-TT--CA-C--TA--TG--CAGTTT-----GT----TT-----CT------T----TG--------TG-AA-C------A-G--TTT--------------TTCT-----GG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2435083                                     859 46 +      1070 C-TT--TA-C--TA--TG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCC-----GG
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1410 45 -     16823 --tt--ca-c--ca--t-gt-agtcta----atttattt-----gt------t----tg--------tg-aa-c------a-g--ttt--------------ttct-----gg
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 1 C 0
s Jaculus_jaculus.JH725527.1                               1232836 21 +   9596543 T-TTATCA-TGtgt--ta--tatttc-----t---------------------------------------------------------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 7
s Kogia_breviceps.KogBre_flattened_line_3970                 63910 45 -     97402 --TT--CA-C--CA--T-GT-AGTCTA----ATTTATTT-----GT------T----TG--------TG-AA-C------A-G--TTT--------------TTCT-----GG
i Kogia_breviceps.KogBre_flattened_line_3970             I 1 C 0
s Lagothrix_lagothricha.k141_246028                          39301 48 +    110728 T-T---TA-C--TA--CA--TGATCTT----TT----TT-----AT------T----TGCCTG----TGAAA-A------A-CTGTTT--------------TACT-----GG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58890 57 -     65777 --TT--T--A--C---TG--TGGTCTG----AT----TT-----ATTT-GT-T----TG--------CA-AA-C------A-G--GTTTTTTGTTTTTTTTTTCCT-----GA
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756304 46 +  30322482 c-tt--ta-c--ta--tg--tggtctg----at----tt-----gt------t----tgcttg----tg-aa-c------a-a--ttt--------------ttct-----gg
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        4957 49 -      5330 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16395 49 -     16762 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16693 49 -     17065 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6218 49 -     11567 T-TT--TA-C--CA--TG--CGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTC--------------TGCT-----GG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7599 49 -     12945 T-TT--TA-C--CA--TG--CGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTC--------------TGCT-----GG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          4958 46 +     29618 C-TT--TA-C--GA--GG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4957 46 +     31569 C-TT--TA-C--GA--GG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          4965 46 +     24756 C-TT--TA-C--GA--GG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       4962 46 +     16388 C-TT--TA-C--GA--GG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809094 22 -   3914936 ---------------------------------------------------------tg----tttatg-aa-c------a-a--tct--------------ttgt-----gg
i Leptonychotes_weddellii.KB714746.1                     I 20 C 0
s Lepus_americanus.LepAme_scaffold_56121                     11670 42 +     24238 T-TA--CA-C--TA--TG--TAGTTTG----AT----TT-----GT------T----TG--------AG-AA-T------A-A--TTT--------------TTCT-----GG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             332933 45 +    662738 --tt--ca-c--ca--t-gt-agtcta----atttattt-----gt------t----tg--------tg-aa-c------a-g--ttt--------------ttct-----gg
i Lipotes_vexillifer.KE559953.1                          I 1 C 0
s Lophocebus_aterrimus.ctg367                               328633 48 -   1826925 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39075948 44 +  43346337 t-tt--ca-g--ta--tg--tggtctg----act--ctt-----gt------t----tg--------tg-gg-c------a-a--ttt--------------ttct-----gg
i Loxodonta_africana.GL010049.1                          I 8 C 0
s Lycaon_pictus.CM007581.1                                41610271 22 +  59628241 ---------------------------------------------------------TG----TTTACG-AA-C------A-A--TCT--------------TTGT-----GG
i Lycaon_pictus.CM007581.1                               I 20 C 0
s Macaca_arctoides.k141_1757516                              40914 48 -     61512 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368542 48 -  60120075 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20861 48 +     30207 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           17964 48 -     24934 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20748 48 +     30527 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31937 48 -     50087 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41675 48 +     51645 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410249 48 - 187317192 g-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCttg----tg-aa-a------a-atgttt--------------ttct-----ag
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395132 48 +  25927173 g-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCttg----tg-aa-a------a-atgttt--------------ttct-----ag
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44264 48 -     62418 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                20951 48 +     24253 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40708 48 +     59329 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266540 48 +    668171 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17886 48 +     21031 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31618 48 +     33478 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218889 48 -    270270 --T---TT-A--C---TG--TGGTCCG----AT----TT-----ACTT-AA-TATGGTC--------TG-AA-C------AAA--TTT--------------TTCT-----GG
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318016 48 +  24302211 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352848 48 -    752769 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669656 22 -    737560 ---------------------------------------------------------TT----TTTATG-AA-C------A-G--TTT--------------TTCT-----TG
i Manis_javanica.JSZB01003497.1                          I 20 C 0
s Manis_pentadactyla.KN006162.1                             216950 22 +    317179 ---------------------------------------------------------TT----TTTATG-AA-C------G-G--TTT--------------TTCT-----TG
i Manis_pentadactyla.KN006162.1                          I 20 C 0
s Marmota_marmota.CZRN01000018.1                           7488913 41 +  40650429 T-TT--CA-C--TA--TG--CAGTTT-----GT----TT-----CT------T----TG--------TG-AA-C------A-G--TTT--------------TTCT-----GG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       145966 48 +    207569 --T---TT-A--C---TA--TGGTCCA----AT----TT-----ATTC-AC-TATGGCC--------TG-AA-T------AAA--TTT--------------TTCT-----GG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14021 22 -     74585 ---------------------------------------------------------TG----TTTATG-AA-C------A-A--TAT--------------TTGT-----GG
i Mellivora_capensis.MelCap_flattened_line_19308         I 20 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 44808 40 -    140813 --TT--CA-T--CA--TG--TGTTTT-----GT----TT-----CC------T----TG--------TG-CC-T------C-G--TTT--------------TCTT-----GA
i Meriones_unguiculatus.MerUng_scaffold_7390             I 4 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79475 45 +     93471 --tt--ca-c--ca--c-gt-agtcta----atttattt-----gt------t----tg--------tg-aa-c------a-g--ttt--------------ttct-----gg
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 1 C 0
s Mico_argentatus.k141_582562                                 5976 50 +     17804 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------AAATGTTT--------------TACT-----GG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6749 50 -     12984 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------AAATGTTT--------------TACT-----GG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14711 50 -     26561 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------AAATGTTT--------------TACT-----GG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980562 46 +  93316391 c-tt--ta-c--tA--GG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180230 19 +    200668 ----------------------------------------------------T----TG--------TG-AA-C------A-A--TTT--------------TTTT-----AG
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 21 C 0
s Microtus_ochrogaster.CM001695.1                         15959707 40 +  27267610 --TT--Ca-a--ca--ta--tgtttt-----at----tt-----ct------t----tg--------tg-gc-t------A-G--TTT--------------TCAT-----GA
i Microtus_ochrogaster.CM001695.1                        I 4 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360583 25 -   8254450 --------------------------------------------ATTT-AC-T----TG--------TG-AA-C------A-A--TTT--------------TTCT-----GG
i Miniopterus_natalensis.LDJU01000034.1                  I 8 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39484 25 -     48117 --------------------------------------------ATTT-AC-T----TG--------TA-AA-C------A-A--TTT--------------TTCT-----GG
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 8 C 0
s Miopithecus_ogouensis.k141_1534655                         17948 27 -     27822 --------------------------------------------AT------T----TGCTTG----TG-AG-A------A-ATGTTT--------------TTCT-----AG
i Miopithecus_ogouensis.k141_1534655                     I 21 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4110 22 +     27589 ---------------------------------------------------------tg----tttatg-aa-c------a-a--tct--------------ttgt-----gg
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 20 C 0
s Mirza_zaza.k141_766280                                     48424 46 -     62432 C-TT--TA-C--TA--GG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351371 45 +    437263 --TT--CA-C--CA--T-GT-AGTATA----ATTTATTT-----GT------T----TG--------TG-AA-A------A-G--TTT--------------TTCT-----GG
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174402 19 +    366855 ----------------------------------------------------T----TG--------TG-AA-C------A-A--TTT--------------TCCC-----AG
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 21 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22431 51 -     82753 --CT--CA-C--TA--T-GT-GGTCTA----AT----TTA-CTGGT------T----TG--------TG-AA-CCAATGAA-G--TTT--------------TTCT-----CT
i Moschus_moschiferus.MosMos_scaffold_13123              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14120 22 -     63510 ---------------------------------------------------------TG----TTTATG-AA-C------A-A--ACT--------------CTGT-----GG
i Mungos_mungo.MunMun_flattened_line_18455               I 16 C 0
s Murina_feae.MurFea_scaffold_17764                          33301 45 +     47283 --TT--T--A--C---TG--TGGTCTG----AT----TT-----AT-C-TGTT----TG--------CC-AG-C------A-A--TT-TTT-----------TCCT-----GA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35584924 40 + 120012414 --TT--CA-T--CA--TG--TGCTTT-----GT----TT-----CC------C----TG--------TG-CC-T------A-G--TTT--------------TTAT-----GA
i Mus_caroli.LT608237.1                                  I 4 C 0
s Mus_musculus.chr8                                       41679305 40 + 129401213 --TT--CA-T--CA--TG--TGCTTT-----GT----TT-----CC------C----TG--------TG-CC-T------A-G--TTT--------------TTAT-----GA
i Mus_musculus.chr8                                      I 4 C 0
s Mus_pahari.LT608297.1                                   58212938 40 +  89631738 --TT--Ca-t--ca--tg--tgtttt-----gt----tt-----cc------t----tg--------tg-cC-T------A-G--TTT--------------TTAT-----GA
i Mus_pahari.LT608297.1                                  I 4 C 0
s Mus_spretus.CM004101.1                                  39486414 40 + 130317789 --TT--CA-T--CA--TG--TGCTTT-----GT----TT-----CC------C----TG--------TG-CC-T------A-G--TTT--------------TTAT-----GA
i Mus_spretus.CM004101.1                                 I 4 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80048 41 -     86153 T-CT--CA-C--TC--GG--CGATTT-----AT----TT-----CT------T----TG--------TG-AA-C------A-A--TTT--------------TCCT-----GG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14343022 22 +  14710649 ---------------------------------------------------------TG----TTTATG-AA-C------a-a--tat--------------ttgt-----gg
i Mustela_putorius.JH418006.1                            I 20 I 43
s Myotis_brandtii.KE162005.1                               9787750 48 +  10118263 --TT--T--A--C---TG--TGGTCTG----AT----TT-----AT-CTAT-t----tg--------ca-aa-c------a-a---tt--------ttttttttct-----ga
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378136 49 +   6019432 --TT--T--A--C---TG--TGGTCTA----AT----TT-----AT-C-TGTT----TG--------CA-AA-C------A-A--ATTTTTT-TT-------GTCT-----GA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18380 48 -     39439 --TT--T--A--C---TG--TGGTCTG----AT----TT-----AT-C-TGTt----tg--------ca-aa-c------a-a---tt--------tttttttcct-----ga
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1694 49 +      3929 --TT--T--A--C---TG--TGGTCTG----AT-----T-----AT-C-TGTT----TG--------CA-AA-C------A-A--TTTTTTT-TTT------TTCT-----GA
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108765 41 +    130748 T-TT--CA-C--TA--TG--TTGTCTG-----T----TT-----AT------T----TG--------TG-AA-C------A-A--TTT--------------TGAT-----AG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 7 C 0
s Nasalis_larvatus.k141_1350636                              24292 48 +     34575 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464506 22 -  31847680 ---------------------------------------------------------tg----tttatg-aa-c------a-a--tct--------------ttgt-----gg
i Neomonachus_schauinslandi.NINY01007730.1               I 20 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225540 45 -   7148211 --tt--ca-C--CA--T-GT-Agtcta----atttattt-----gt------t----tg--------tg-aa-A------A-G--TTT--------------TTCT-----GG
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122615 19 -    149072 ----------------------------------------------------T----TG--------TG-AA-C------A-A--CTT--------------TTCT-----AG
i Noctilio_leporinus.NocLep_scaffold_7894                I 23 C 0
s Nomascus_annamensis.k141_1771965                           49243 48 -    132029 G-CT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ACGTTA--------------TTCC-----AG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5339 48 -     16345 G-CT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ACGTTA--------------TTCC-----GG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11222 48 +     22201 G-CT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ACGTTA--------------TTCC-----GG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409559 48 -  22158432 G-CT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ACGTTA--------------TTCC-----GG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21622 48 -     54323 G-CT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ACGTTA--------------TTCC-----GG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193887 22 +   9404916 ---------------------------------------------------------TG----TTTATG-AA-C------A-A--TCT--------------TTGT-----GG
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 20 C 0
s Ochotona_princeps.JH802162.1                             2566727 41 -   3988456 t-ta---a-t--ta--tt--tagtttG----AT----TT-----GT------T----TG--------TG-AA-T------A-A--TTT--------------TTCT-----GG
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447279 22 +   2017862 ---------------------------------------------------------TG----TTTATG-AA-C------A-A--TCT--------------TTGT-----GG
i Odobenus_rosmarus.KB229312.1                           I 20 C 0
s Odocoileus_virginianus.KZ100018.1                         434428 45 -    630418 --CT--CA-C--TA--T-GT-GGTCTA----AT----TTA-CTGGT------T----TG--------TG-AC-C------A-G--TTT--------------TTCT-----TT
i Odocoileus_virginianus.KZ100018.1                      I 1 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12416 45 +    150152 --ct--ca-c--ta--t-gt-ggtcta----at----ttattg-gt------t----tg--------tg-ac-c------a-g--ttt--------------ttct-----tt
i Okapia_johnstoni.LVCL01S0005463.1                      I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    85959 40 -    140218 --TT--CA-A--CA--TA--TGTTTT-----AT----TT-----CT------T----TG--------TG-GC-T------A-G--TTT--------------TCAT-----GA
i Ondatra_zibethicus.OndZib_scaffold_7387                I 4 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   103289 40 +    107918 --CT--CA-A--CA--TG--TGTTTT-----AT----TT-----CT------T----CG--------TG-GT-T------A-G--CTT--------------TTAT-----GA
i Onychomys_torridus.OnyTor_scaffold_2487                I 4 C 0
s Orcinus_orca.KB316932.1                                  8094805 45 +  10937097 --tt--ca-C--CA--T-GT-AGTCTA----ATTTATTT-----GT------T----GG--------TG-AA-A------A-G--TTT--------------TTCT-----GG
i Orcinus_orca.KB316932.1                                I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                       107098919 42 - 174332312 T-TA--CA-C--TA--TA--TAGTTTG----AT----TT-----gt------t----tg--------ag-aa-t------a-a--ttt--------------tttt-----ag
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        34953 22 +    559221 ---------------------------------------------------------TG----TTTATG-AA-C------A-A--TCT--------------TTGT-----GG
i Otocyon_megalotis.JAEUCK010005147.1                    I 20 C 0
s Ovis_aries.CM001607.2                                   26402405 45 -  44047080 --CT--CA-C--TA--T-GT-GGCCTA----AT----TTATCA-GT------T----TA--------TG-AA-C------A-G--TTT--------------TTCT-----TT
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       2924 45 +     17875 --CT--CA-C--TA--T-GT-GGCCTA----AT----TTATCA-GT------T----TA--------TG-AA-C------A-G--TTT--------------TTCT-----TT
i Ovis_canadensis.OviCan_scaffold_67953                  I 1 C 0
s Pan_troglodytes.CM009242.2                               1467446 48 - 189151597 g-tt--tt-c--ta--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----AG-AA-A------A-ACTTTT--------------TTCT-----GG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20159 22 -    230217 ---------------------------------------------------------TG----TTTATG-AA-A------A-A--TCT--------------TTGT-----GG
i Panthera_onca.PanOnc_flattened_line_3271               I 20 C 0
s Panthera_pardus.KV860321.1                              18457485 22 -  18783137 ---------------------------------------------------------TG----TTTATG-AA-A------A-A--TCT--------------TTGT-----GG
i Panthera_pardus.KV860321.1                             I 20 C 0
s Panthera_tigris.KE722367.1                               3968214 22 +   8748460 ---------------------------------------------------------TG----TTTATG-AA-A------A-A--TCT--------------TTGT-----GG
i Panthera_tigris.KE722367.1                             I 20 C 0
s Pantholops_hodgsonii.KE114653.1                          1613851 45 +   2937107 --CT--CA-C--TA--T-GT-GGCCTA----AT----TTATCA-GT------T----TA--------TG-AA-C------A-G--TTT--------------TTCT-----TT
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                   238860 48 - 183742232 g-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCttg----tg-aa-a------a-atgttt--------------ttct-----ag
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5327 48 +     21308 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-GA-A------A-ATGTTT--------------TTCT-----AG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286364 48 -  20919399 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  17980 48 -     27687 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-GA-A------A-ATGTTT--------------TTCT-----AG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11116 48 +     16796 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17926 48 -     23640 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11076 23 +     78924 ---------------------------------------------------------TG----TTTATG-AAAA------A-A--TCT--------------TTGT-----GG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 20 C 0
s Peromyscus_maniculatus.KI615324.1                         242971 20 +  18517816 ---------------------------------------------t------t----tg--------tg-ac-t------A-G--TTT--------------TCAT-----GA
i Peromyscus_maniculatus.KI615324.1                      I 19 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10668 45 -     15039 --TT--CA-C--CA--T-GT-AGTCTA----ATTTATTT-----GT------T----TG--------TG-AA-A------A-G--TTT--------------TTCT-----GG
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 1 C 0
s Piliocolobus_badius.k141_2495623                            4746 48 +      7560 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60453 48 -     63152 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43052 48 +     45295 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     731 48 +      5735 g-tt--ta-c--ta--tg--tgatctc----at----tt-----at------t----tgcttg----tg-aa-a------a-atgttt--------------ttct-----ag
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45576 49 +     46691 --TT--T--A--C---TG--TGGTCTG----AT----TT-----ACTT-GT-T----TG--------CA-AA-C------A-A--TTTTTTT-TT-------TCCT-----GA
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             60933 49 +    207309 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2053 49 -     25401 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27768 49 +     58159 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28044 49 +     63561 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27807 49 +     51148 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552800 49 -   4542175 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27791 49 +     51125 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2747 45 -      8168 --tt--ca-c--ca--t-gt-agtcta----atttattt-----gt------t----tg--------tg-aa-c------a-g--ttt--------------ttct-----gg
i Platanista_gangetica.PlaMin_flattened_line_167872      I 1 C 0
s Plecturocebus_bernhardi.k141_2549090                        4224 48 +     39866 T-CT--TA-C--TA--TG--TGATCTT----TT----TC-----AT------T-----GCTTG----TGAAA-A------A-CTGTTT--------------TACT-----GG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38713 47 -     87950 T-TT--TA-C--TA--TG--TGATCCT----TT----CC-----AT------T-----GCTTG----TGAAA-A------C--TGTTT--------------TACT-----GG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39106 35 -     88961 T-TT--TA-C--TA--TG--TGATCCT----TT----CC-----AT------T-----GCTTG----TGAAA-A---------------------------------------
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 12
s Plecturocebus_cupreus.k141_2351393                          3806 47 -     39403 T-TT--TA-C--TA--TG--TGATCCT----TT----CC-----AT------T-----GCTTG----TGAAA-A------C--TGTTT--------------TACT-----GG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38759 47 +     87928 T-TT--TA-C--TA--TG--TGATCCT----TT----CC-----AT------T-----GCTTG----TGAAA-A------C--TGTTT--------------TACT-----GG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3802 48 -     60166 T-CT--TA-C--TA--TG--TGATCTT----TT----TC-----AT------T-----GCTTG----TGAAA-A------A-CTGTTT--------------TACT-----GG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10738 48 -     67232 T-CT--TA-C--TA--TG--TGATCTT----TT----TC-----AT------T-----GCTTG----TGAAA-A------A-CTGTTT--------------TACT-----GG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38655 35 -     90634 T-TT--TA-C--TA--TG--TGATCCT----TT----CC-----AT------T-----GCTTG----TGAAA-A---------------------------------------
i Plecturocebus_miltoni.k141_349282                      C 0 I 12
s Plecturocebus_moloch.k141_1031110                          40122 48 +     89403 T-CT--TA-C--TA--TG--TGATCTT----TT----TC-----AT------T-----GCTTG----TGAAA-A------A-CTGTTT--------------TACT-----GG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173063 48 - 189387572 g-tt--ta-c--tA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----AG-AA-A------A-ACTTTT--------------TTCT-----GG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188061 48 -   9816681 G-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----AG-AA-A------A-ACTTTT--------------TTCT-----GG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23232 48 +     69807 G-TT--TA-T--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40427 48 -     80239 G-TT--TA-T--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7941 42 +     14086 T-TT--CA-G--TA--TG--GTATCTG----AT----TT-----GT------T----TG--------TG-GG-C------A-G--CTT--------------TTCT-----GG
i Procavia_capensis.ProCapCap_scaffold_121686            I 8 C 0
s Prolemur_simus.MPIZ01000396.1                            1979462 46 +   4620579 c-tt--ta-c--tA--TG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562044 46 -   2598838 c-tt--ta-c--tA--TG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79131 46 -     79582 C-TT--TA-C--TA--TG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              286 46 -     11706 C-TT--TA-C--TA--TG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4021 46 -     30655 C-TT--TA-C--TA--TG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30346 46 +     46564 C-TT--TA-C--TA--TG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90637 46 -     98465 c-tt--ta-c--ta--tg--tggtctg----at----tt-----gt------t----tgcttg----tg-aa-c------a-a--ttt--------------ttct-----gg
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4259 46 +     35169 c-tt--ta-c--ta--tg--tggtctg----at----tt-----gt------t----tgcttg----tg-aa-c------a-a--ttt--------------ttct-----gg
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            32302 40 +     52041 --TT--ca-t--ca--tg--tgtttt-----gt----tt-----cc------t----tg--------tg-cC-T------C-A--TTT--------------TCTT-----GA
i Psammomys_obesus.NESX01036366.1                        I 4 C 0
s Pteronotus_parnellii.KE847780.1                            47481 19 -     66298 ----------------------------------------------------T----TG--------TG-AA-C------A-A--TTT--------------TTCT-----AG
i Pteronotus_parnellii.KE847780.1                        I 21 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4160 22 -     10349 ---------------------------------------------------------TG----TTTATA-AA-C------A-A--TAT--------------TTGT-----GG
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 20 C 0
s Pteropus_alecto.KB030862.1                               5836360 49 -  28871421 --tt--tt-g--c---TG--TGGTCTG----AT----TT-----ATTC-AA-TATGGTC--------TG-AA-C------AAA--TTT--------------TTCT-----GG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3532936 49 -   4952924 --tt--tt-a--c---TG--TGGTCTG----AT----TT-----ATTC-AA-TATGGTC--------TG-AA-C------AAA--TTT--------------TTCT-----GG
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095037 22 +  38429054 ---------------------------------------------------------TG----TTTATG-AA-A------A-A--TCT--------------TTGT-----GG
i Puma_concolor.QAVW01001104.1                           I 20 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51385 45 +     55069 --CT--CA-C--TA--T-GT-GGTCTA----AT----TTA-CTGGT------T----TG--------TG-AC-C------A-G--TTT--------------TTCT-----TT
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 1 C 0
s Rattus_norvegicus.chr16                                 37011647 40 -  90668790 --TT--CA-T--CA--TG--CATTTT-----GT----TT-----CC------T----CG--------TG-CT-C------A-G--TTT--------------ATCT-----GA
i Rattus_norvegicus.chr16                                I 4 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2908475 48 +   3329780 --t---tcca--c---ta--tgttatg----at----tt-----attc-ac-tatggtc--------tg-aa-c------c-a--ttt--------------tttt-----gg
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 C 0
s Rhinopithecus_bieti.k119_221883                            24450 48 +     27361 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117809 48 + 195417433 g-tt--ta-c--ta--tg--tgatctc----at----tt-----at------t----tgcttg----tg-aa-a------a-atgttt--------------ttct-----ag
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232058 48 -   7961872 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70426 30 -    116970 --------------------------------------------ATTC-AA-TATGATC--------TG-AA-C------AAA--TTT--------------TGCT-----GG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 15 C 0
s Saguinus_bicolor.k141_1125626                              16449 49 +     16959 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38299 49 +     72255 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            10940 49 +     11432 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16315 49 -     16755 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14885 49 -     15289 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386881 49 - 209938924 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7746 49 +     22212 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAGA-A------A-ATGTTT--------------TACT-----GG
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16243 49 +     39756 T-TT--TA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        5991 45 +     16473 --CT--CG-C--TA--T-GT-GGTCTA----AT----TTATCA-GT------T----TA--------TG-AA-C------A-G--TTT--------------TTCT-----TT
i Saiga_tatarica.SaiTat_scaffold_39512                   I 1 C 0
s Sapajus_apella.ctg103                                     234431 49 +   5703754 T-TT--CA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4021 49 +     21866 T-TT--CA-C--TA--TG--TGATCTT----TT----TT-----AT------T----TGCTTG----TGAAA-A------A-ATGTTT--------------TACT-----GG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111940 23 +    313613 T--T--CA-A--TA--TG--TGTTCTG----AT----TT-----AT------T------------------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 16
s Semnopithecus_entellus.k141_158471                         20940 48 +     27374 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24455 48 +     58920 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           10952 48 -     45317 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18609 48 -     42441 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21291 48 -     29113 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24363 48 -     48123 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    44243 40 +     77746 --TT--CA-A--GA--TA--TGCTTT-----AT----TT-----GT------T----GG--------TG-GC-T------A-G--TTT--------------TTAT-----GA
i Sigmodon_hispidus.SigHis_scaffold_20193                I 4 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854125 42 -   1910179 T-TT--CA-C--TA--TG--TGGTCTG----AA----TT-----GC------T----TG--------TG-AA-C------A-A--TTT--------------TCCT-----GA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855123 41 +   3870691 T-TT--CA-C--TA--TG--CAGTTT-----GT----TT-----CT------T----TG--------TG-AA-C------A-G--TTT--------------TTCT-----GG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              2023 22 -     97271 ---------------------------------------------------------TG----TTTATG-AG-C------A-A--TCT--------------TTGT-----GG
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 20 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120716 22 +    196729 ---------------------------------------------------------TG----TTTATG-AA-C------A-A--TCT--------------TTGT-----GG
i Suricata_suricatta.SurSur_flattened_line_6629          I 20 C 0
s Sus_scrofa.CM000828.4                                    6639441 19 +  69701581 --------------------------------------------------------------------C-AT-C------A-G---TT--------------TTATGTTATGT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386535 48 +   1523678 G-CT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ACGTTA--------------TTCT-----GG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11053 44 +     22964 --TT--TC-A--T---TG--TGGTCTG----AT----TT-----ATTT-GC-T----TG--------TG-AA-A------A-A--TTT--------------TTCT-----GG
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 3
s Tamandua_tetradactyla.TamTet_scaffold_67439                23720 41 -     25844 T-TT--CA-C--TA--TG--TTATCTG-----T----TT-----AT------T----TT--------TG-AA-C------A-A--TTC--------------TGAT-----AG
i Tamandua_tetradactyla.TamTet_scaffold_67439            I 5 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187194 44 +    199430 --tt--ca-t--ga--tg--tggtttg----at----tt-----at------t----tg----tttctg-aa-c------a-a--gtt--------------tt-t-----gg
i Tapirus_indicus.TapInd_scaffold_7432                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101149 44 -    539355 --TT--CA-T--GA--TG--TGGTTTG----AT----TT-----AT------T----TG----TTTCTG-AA-C------A-A--GTT--------------TT-T-----GG
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_1780720                                2905 48 +      6850 TTTT--TA-C--TA--TA--TGGTCTG----AT----TT-----AT------T----TGCTTG----TG-AA-C------A-AT-TTT--------------TTCT-----GG
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                2990 47 +     20590 T-TT--TA-C--TA--TA--TGGTCTG----AT----TT-----AT------T----TGCTTG----TG-AA-C------A-AT-TTT--------------TTCT-----GG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348845 48 - 186847797 g-TT--TA-C--TA--TG--TGATCTG----AT----TT-----AT------T----TGCTTG----TG-GA-A------A-ATGTTT--------------TTCT-----AG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                    9185 29 -     31044 ----------------------ATTTG-----T----TT-----AT------T----TG--------TG-AA-C------A-A--TTC--------------TGAC-----AG
i Tolypeutes_matacus.TolMat_scaffold_31955               N 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475268 19 -    610378 ----------------------------------------------------T----TG--------CG-AA-C------A-A--TTT--------------TTCT-----AG
i Tonatia_saurophila.TonSau_scaffold_294                 I 21 C 0
s Trachypithecus_auratus.k141_1189070                        16504 48 +     26378 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29185 48 -     78344 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15825 48 +     25722 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24048 48 -     62838 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24167 48 +     46913 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          4975 48 -     28527 G-TT--TA-C--TA--TG--TGATGTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      25987 48 -     64340 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24024 48 -     63452 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5466 48 +     22490 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3086 48 +      4141 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5892 48 -     13050 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251129 48 -   6242583 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56861 48 +     59866 G-TT--TA-C--TA--TG--TGATCTC----AT----TT-----AT------T----TGCTTG----TG-AA-A------A-ATGTTT--------------TTCT-----AG
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478594 46 -  10818551 t-tt--ca-c--ta--tg--cggtctg----agtttttt-----gt------t----tg--------tg-gg-g------c-a--ttt--------------ttct-----gg
i Trichechus_manatus.JH594705.1                          I 22 C 0
s Tupaia_chinensis.KB320699.1                              1825519 20 -   4065304 ---------------------------------------------T------T----TG--------CA-AA-T------A-A--GTT--------------TCCT-----GG
i Tupaia_chinensis.KB320699.1                            I 8 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2914 20 -     70247 ---------------------------------------------T------T----TG--------CA-AA-T------A-A--GTT--------------TTCT-----GG
i Tupaia_tana.TupTan_flattened_line_394                  I 8 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359544 45 -  33153633 --tt--ca-c--ca--t-gt-agtcta----atttattt-----gt------t----tg--------tg-aa-a------a-g--ttt--------------ttct-----gg
i Tursiops_truncatus.MRVK01000835.1                      I 1 C 0
s Ursus_maritimus.KK499267.1                                177249 22 +   5085361 ---------------------------------------------------------TG----TTTATG-AA-C------A-G--TCT--------------TTGC-----GG
i Ursus_maritimus.KK499267.1                             I 20 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103366 23 -    105689 T--T--CA-A--TA--TG--TGGTCTG----AT----TC-----AT------T------------------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 16
s Varecia_rubra.k141_787544                                  21092 46 -     30710 c-tt--ta-c--ta--tg--tggtctg----at----tt-----gt------t----tgcttg----tg-aa-c------a-a--ttt--------------ttct-----gg
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20000 46 -    147434 C-TT--TA-C--TA--TG--TGGTCTG----AT----TT-----GT------T----TGCTTG----TG-AA-C------A-A--TTT--------------TTCT-----GG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74634 39 +   5488506 --tt--ca-c--ta--t----ggtcta----at----tt-----at------t----tc--------tg-aa-c------a-g--ttt--------------ttct-----gg
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100633 22 -    112863 ---------------------------------------------------------TG----TTTATG-AA-C------A-A--TCT--------------TTGT-----GA
i Vulpes_lagopus.VulLag_flattened_line_12041             I 20 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162097 41 -    224448 T-TT--CA-C--TA--TG--CAGTTT-----AT----TT-----TT------T----TG--------TG-AA-A------A-G--TTT--------------TTCT-----GG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24498 22 -     86975 ---------------------------------------------------------TG----TTTATG-AA-C------A-A--TCT--------------TTGT-----GG
i Zalophus_californianus.ZalCal_flattened_line_17732     I 20 C 0
s Zapus_hudsonius.ZapHud_scaffold_209943                       238 19 -      3146 T-TTGTTA-T--TT--TG--TGTTTC-----T---------------------------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_209943                 C 0 I 8
s Ziphius_cavirostris.ZipCav_flattened_line_2660542            199 45 +       358 --tt--ca-c--ca--c-gt-agtcta----atttattt-----gt------t----tg--------tg-aa-c------a-g--ttt--------------ttct-----gg
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      I 1 C 0
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542  0 +     83186 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        254 1 +     36723 T
s Acinonyx_jubatus.LLWD01001279.1                           808804 1 +   1699592 T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410588 1 +  29979442 C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            211492 1 +    347723 C
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    10462 1 -     61208 T
i Allactaga_bullata.AllBul_scaffold_20030                I 8 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43565 1 +     53615 T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39380 1 +     44087 T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68303 1 -     84148 T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40526 1 -     78289 T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39974 1 +     55831 T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38415 1 -     64179 T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20058 1 -     24835 T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37041 1 +     45454 T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42740 1 +     70886 T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4867 1 +     30854 T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29006 1 +     42133 T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583515 1 +   2318259 T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172242 1 -    412891 T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48611 1 -     68529 T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46811 1 -     65372 T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40559 1 +     43593 T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668569 1 +   5030052 T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20211 1 -     23494 T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5347 1 +      8415 T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5752 1 -     32367 T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_859459                  200 1 -       293 T
i Artibeus_jamaicensis.ArtJam_scaffold_859459            C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270802 1 +  21539123 T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6973 1 +     48076 T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2107 1 -     28759 T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29659 1 +     44353 T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45034 1 -     71267 T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19090 1 -     33135 T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2225 1 +     11645 T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2227 1 -     19611 T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955340 1 -  23207421 t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2548 1 -      4711 t
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84509 1 +    124022 T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20040 1 +    288883 T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354427 1 +  48749331 T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      752995 1 +   1948126 t
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543134 1 -  45695690 t
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528156 1 -   4408762 t
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   3993 1 +     28062 T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39288 1 -     91139 T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16813 1 +     95584 T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16726 1 +    119600 T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5918 1 -     13885 T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14604 1 +     17162 T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449560 1 + 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15853 1 -     18408 T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629334 1 +  17673402 t
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663620 1 +   7040546 t
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207280 1 +   1652518 t
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501022 1 +  60362399 C
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4652 1 -     23171 C
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218013 1 +   9314153 C
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41611138 1 +  59632846 c
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45102708 1 -  63665305 C
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407226 1 -  46296322 T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589499 1 +  44709034 T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265350 1 +    496798 T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                140 1 +      5315 T
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    18161 1 -     39886 T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     74985 1 -    217609 T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1138 1 -     12580 T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39024 1 +     53515 T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367256 1 -  26074798 T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4145 1 -     34880 T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63240 1 -     89041 T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13621 1 -     50533 T
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15487988 1 -  27778364 T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14821 1 +     27315 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136725 1 -   4669795 t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40466 1 +     47900 T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40298 1 -     44860 T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40280 1 -    148725 T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23266 1 -     40656 T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3274 1 +     20796 T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7529 1 -     17524 T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23221 1 -     34525 T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7941 1 -     25376 T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360418 1 -  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266246 1 +  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27692 1 -     45857 T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23483 1 -     32606 T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27132 1 +     27662 T
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21182 1 +     70610 T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18047 1 +     36323 T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             2203 1 -     19938 A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 424
s Cheirogaleus_major.k141_666340                             26647 1 -     33796 T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              841 1 -     15404 T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5090 1 -     32913 T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15503 1 -     40346 T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15767 1 +    216457 T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15546 1 +     39636 T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16595 1 -     17061 T
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38632 1 -    112038 T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4204 1 +     34062 T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338945 1 +  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5549 1 -     44032 T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300271 1 - 135778131 T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404802 1 -   2368649 t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373992 1 - 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4686 1 -      6605 T
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802896 1 +  53390261 T
i Condylura_cristata.JH655891.1                          I 16 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8509 1 +     10921 T
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 38511 1 -     83289 T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45446 1 -     47254 T
i Cryptoprocta_ferox.CryFer_flattened_line_24933         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2087282 1 -   2246927 A
i Dasypus_novemcinctus.JH564415.1                        C 0 I 410
s Daubentonia_madagascariensis.ctg71                        288664 1 +  12879189 T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623673 1 -  35494412 T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660277 1 -   1390856 T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134797 1 -    198055 T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               1866 1 +     19438 T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237903 1 -    607251 T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          26331 1 +    110024 T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                            8249 1 +     18970 T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906031 1 +  41312741 C
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12573437 1 +  14770903 t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037460 1 -   4378816 T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371394 1 +  39960074 t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408180 1 -    498745 t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258501 1 +  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63219 1 -    133382 t
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3435 1 +      7672 t
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11625 1 -     24895 t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39337 1 -     70999 t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83297 1 +    112731 t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39869 1 +     68309 t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50194 1 -     65740 T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20824 1 -     75513 T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45017 1 -     97555 T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1744 1 +     30972 T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39467 1 -     52037 t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55868 1 -    111500 t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242463 1 - 206538554 T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112245 1 - 205367284 T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23593 1 -     30238 T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14802 1 +     18121 T
i Galeopterus_variegatus.GalVar_scaffold_74466           I 42 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89578 1 -     95226 T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31442 1 -     36801 T
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                                612 1 -      8343 T
i Gorilla_beringei.k141_3358147                          I 48 C 0
s Gorilla_gorilla.LT578341.1                                250106 1 - 186649187 T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11044 1 +     11903 T
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11558 1 -     40692 T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32960 1 +     49394 t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57828 1 -     66874 t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6705 1 -     42923 T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13701 1 -     53142 T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26369 1 -    327341 T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7330 1 +     48891 T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10826 1 +     12639 T
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5919 1 -     36432 t
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545757 1 -   1711038 T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45048 1 +     49977 t
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138006 1 -    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               1034 1 +     12352 T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8217 1 +     55766 T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047561 1 + 191637585 T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796893 1 +  11177569 T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2717 1 -    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374854 1 +   7955117 T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2435083                                     905 1 +      1070 T
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1455 1 -     16823 t
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1232864 1 +   9596543 t
i Jaculus_jaculus.JH725527.1                             I 7 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 63955 1 -     97402 T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39349 1 +    110728 T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58947 1 -     65777 C
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756350 1 +  30322482 t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        5006 1 -      5330 T
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16444 1 -     16762 T
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16742 1 -     17065 T
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6267 1 -     11567 T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7648 1 -     12945 T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5004 1 +     29618 T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5003 1 +     31569 T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5011 1 +     24756 T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5008 1 +     16388 T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809116 1 -   3914936 c
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     11712 1 +     24238 T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             332978 1 +    662738 t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328681 1 -   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39075992 1 +  43346337 t
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41610293 1 +  59628241 C
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              40962 1 -     61512 T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368590 1 -  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20909 1 +     30207 T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18012 1 -     24934 T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20796 1 +     30527 T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31985 1 -     50087 T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41723 1 +     51645 T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410297 1 - 187317192 t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395180 1 +  25927173 t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44312 1 -     62418 T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                20999 1 +     24253 T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40756 1 +     59329 T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266588 1 +    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17934 1 +     21031 T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31666 1 +     33478 T
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218937 1 -    270270 C
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318064 1 +  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352896 1 -    752769 T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669678 1 -    737560 C
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             216972 1 +    317179 C
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7488954 1 +  40650429 T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146014 1 +    207569 T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14043 1 -     74585 C
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 44848 1 -    140813 T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79520 1 +     93471 t
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 6026 1 +     17804 T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6799 1 -     12984 T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14761 1 -     26561 T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980608 1 +  93316391 T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180249 1 +    200668 T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15959747 1 +  27267610 T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360608 1 -   8254450 T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39509 1 -     48117 T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         17975 1 -     27822 T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4132 1 +     27589 c
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     48470 1 -     62432 T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351416 1 +    437263 T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174421 1 +    366855 T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22482 1 -     82753 T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14142 1 -     63510 T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          33346 1 +     47283 T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35584964 1 + 120012414 T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41679345 1 + 129401213 T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58212978 1 +  89631738 T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39486454 1 + 130317789 T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80089 1 -     86153 T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14343087 1 +  14710649 T
i Mustela_putorius.JH418006.1                            I 43 C 0
s Myotis_brandtii.KE162005.1                               9787798 1 +  10118263 t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378185 1 +   6019432 T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18428 1 -     39439 t
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1743 1 +      3929 T
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108806 1 +    130748 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              24340 1 +     34575 T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464528 1 -  31847680 c
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225585 1 -   7148211 T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122634 1 -    149072 T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49291 1 -    132029 T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5387 1 -     16345 T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11270 1 +     22201 T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409607 1 -  22158432 T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21670 1 -     54323 T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193909 1 +   9404916 C
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2566768 1 -   3988456 T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447301 1 +   2017862 C
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434473 1 -    630418 T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12461 1 +    150152 t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    85999 1 -    140218 T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   103329 1 +    107918 T
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orcinus_orca.KB316932.1                                  8094850 1 +  10937097 T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107098961 1 - 174332312 t
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        34975 1 +    559221 C
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26402450 1 -  44047080 T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       2969 1 +     17875 T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467494 1 - 189151597 T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20181 1 -    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18457507 1 -  18783137 T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968236 1 +   8748460 T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1613896 1 +   2937107 T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   238908 1 - 183742232 t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5375 1 +     21308 T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286412 1 -  20919399 T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18028 1 -     27687 T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11164 1 +     16796 T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17974 1 -     23640 T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11099 1 +     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         242991 1 +  18517816 T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10713 1 -     15039 T
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4794 1 +      7560 T
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60501 1 -     63152 T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43100 1 +     45295 T
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     779 1 +      5735 t
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45625 1 +     46691 T
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             60982 1 +    207309 C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2102 1 -     25401 C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27817 1 +     58159 C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28093 1 +     63561 C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27856 1 +     51148 C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552849 1 -   4542175 C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27840 1 +     51125 C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2792 1 -      8168 t
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4272 1 +     39866 T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38760 1 -     87950 T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39153 1 -     88961 T
i Plecturocebus_cinerascens.k141_1164729                 I 12 C 0
s Plecturocebus_cupreus.k141_2351393                          3853 1 -     39403 T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38806 1 +     87928 T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3850 1 -     60166 T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10786 1 -     67232 T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38702 1 -     90634 T
i Plecturocebus_miltoni.k141_349282                      I 12 C 0
s Plecturocebus_moloch.k141_1031110                          40170 1 +     89403 T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173111 1 - 189387572 T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188109 1 -   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23280 1 +     69807 T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40475 1 -     80239 T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7983 1 +     14086 T
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979508 1 +   4620579 T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562090 1 -   2598838 T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79177 1 -     79582 T
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              332 1 -     11706 T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4067 1 -     30655 T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30392 1 +     46564 T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90683 1 -     98465 t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4305 1 +     35169 t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            32342 1 +     52041 T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47500 1 -     66298 T
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4182 1 -     10349 C
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 C 0
s Pteropus_alecto.KB030862.1                               5836409 1 -  28871421 T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3532985 1 -   4952924 T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095059 1 +  38429054 T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51430 1 +     55069 T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37011687 1 -  90668790 T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2908523 1 +   3329780 t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24498 1 +     27361 T
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117857 1 + 195417433 t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232106 1 -   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70456 1 -    116970 T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1125626                              16498 1 +     16959 T
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38348 1 +     72255 T
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            10989 1 +     11432 T
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_labiatus.k141_3072636                             14934 1 -     15289 T
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386930 1 - 209938924 T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_oedipus.k141_1808308                              16292 1 +     39756 T
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6036 1 +     16473 T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234480 1 +   5703754 T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4070 1 +     21866 T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111979 1 +    313613 T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 16 C 0
s Semnopithecus_entellus.k141_158471                         20988 1 +     27374 T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24503 1 +     58920 T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11000 1 -     45317 T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18657 1 -     42441 T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21339 1 -     29113 T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24411 1 -     48123 T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    44283 1 +     77746 T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854167 1 -   1910179 T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855164 1 +   3870691 T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              2045 1 -     97271 C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120738 1 +    196729 T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6639460 1 +  69701581 T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386583 1 +   1523678 T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_547924                 546 1 -      1028 T
i Tadarida_brasiliensis.TadBra_scaffold_547924           n 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                23761 1 -     25844 A
i Tamandua_tetradactyla.TamTet_scaffold_67439            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187238 1 +    199430 c
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101193 1 -    539355 C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                2953 1 +      6850 T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3037 1 +     20590 T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348893 1 - 186847797 T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                    9214 1 -     31044 A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 416
s Tonatia_saurophila.TonSau_scaffold_294                    475287 1 -    610378 T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16552 1 +     26378 T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29233 1 -     78344 T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15873 1 +     25722 T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24096 1 -     62838 T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24215 1 +     46913 T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5023 1 -     28527 T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26035 1 -     64340 T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24072 1 -     63452 T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5514 1 +     22490 T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3134 1 +      4141 T
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5940 1 -     13050 T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251177 1 -   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56909 1 +     59866 T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478640 1 -  10818551 t
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1825539 1 -   4065304 T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2934 1 -     70247 T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359589 1 -  33153633 t
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103405 1 -    105689 T
i Uropsilus_gracilis.UroGra_scaffold_7153                I 16 C 0
s Ursus_maritimus.KK499267.1                                177271 1 +   5085361 C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  21138 1 -     30710 t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20046 1 -    147434 T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74673 1 +   5488506 t
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100655 1 -    112863 C
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162138 1 -    224448 T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24520 1 -     86975 C
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_209943                       265 1 -      3146 T
i Zapus_hudsonius.ZapHud_scaffold_209943                 I 8 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2660542            244 1 +       358 t
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      C 0 C 0
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Saguinus_mystax.k141_2237965                                7795 0 +     22212 C
e Saguinus_inustus.k141_2555509                              16364 0 -     16755 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542 0 +     83186 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        255 2 +     36723 AG
s Acinonyx_jubatus.LLWD01001279.1                           808805 2 +   1699592 AG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410589 2 +  29979442 AA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            211493 2 +    347723 AG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    10463 2 -     61208 AG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43566 2 +     53615 AG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39381 2 +     44087 AG
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68304 2 -     84148 AG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40527 2 -     78289 AG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39975 2 +     55831 AG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38416 2 -     64179 AG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20059 2 -     24835 AG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37042 2 +     45454 AG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42741 2 +     70886 AG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4868 2 +     30854 AG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29007 2 +     42133 AG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583516 2 +   2318259 AG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172243 2 -    412891 AG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48612 2 -     68529 AG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46812 2 -     65372 AG
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40560 2 +     43593 AG
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668570 2 +   5030052 AG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20212 2 -     23494 AG
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5348 2 +      8415 AG
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5753 2 -     32367 AG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_859459                  201 2 -       293 AG
i Artibeus_jamaicensis.ArtJam_scaffold_859459            C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270803 2 +  21539123 AG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6974 2 +     48076 AG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2108 2 -     28759 AG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29660 2 +     44353 AG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45035 2 -     71267 AG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19091 2 -     33135 AG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2226 2 +     11645 GT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2228 2 -     19611 GT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955341 2 -  23207421 ag
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2549 2 -      4711 ag
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84510 2 +    124022 AG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20041 2 +    288883 AG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354428 2 +  48749331 AG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      752996 2 +   1948126 ag
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543135 2 -  45695690 ag
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528157 2 -   4408762 ag
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   3994 2 +     28062 AG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39289 2 -     91139 AG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16814 2 +     95584 AG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16727 2 +    119600 AG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5919 2 -     13885 AG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14605 2 +     17162 AG
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449561 2 + 189096842 AG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15854 2 -     18408 AG
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629335 2 +  17673402 ag
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663621 2 +   7040546 ag
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207281 2 +   1652518 ag
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501023 2 +  60362399 AG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4653 2 -     23171 AG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218014 2 +   9314153 AG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41611139 2 +  59632846 ag
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45102709 2 -  63665305 AG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407227 2 -  46296322 AG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589500 2 +  44709034 AG
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265351 2 +    496798 AG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                141 2 +      5315 AG
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    18162 2 -     39886 AG
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     74986 2 -    217609 AG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1139 2 -     12580 AG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39025 2 +     53515 AG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367257 2 -  26074798 AG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4146 2 -     34880 AG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63241 2 -     89041 AG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13622 2 -     50533 AG
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15487989 2 -  27778364 AG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14822 2 +     27315 AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136726 2 -   4669795 aG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40467 2 +     47900 AG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40299 2 -     44860 AG
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40281 2 -    148725 AG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23267 2 -     40656 AG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3275 2 +     20796 AG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7530 2 -     17524 AG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23222 2 -     34525 AG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7942 2 -     25376 AG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360419 2 -  39242232 AG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266247 2 +  21565898 AG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27693 2 -     45857 AG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23484 2 -     32606 AG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27133 2 +     27662 AG
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21183 2 +     70610 AG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18048 2 +     36323 AG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             2628 2 -     19938 aa
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 424 C 0
s Cheirogaleus_major.k141_666340                             26648 2 -     33796 AT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              842 2 -     15404 AT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5091 2 -     32913 AG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15504 2 -     40346 AG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15768 2 +    216457 AG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15547 2 +     39636 AG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16596 2 -     17061 AG
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38633 2 -    112038 AG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4205 2 +     34062 AG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338946 2 +  18827391 AG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5550 2 -     44032 AG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300272 2 - 135778131 AG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404803 2 -   2368649 aC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373993 2 - 200372422 AG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4687 2 -      6605 AC
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802897 2 +  53390261 AG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8510 2 +     10921 AG
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 38512 2 -     83289 AA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45447 2 -     47254 AG
i Cryptoprocta_ferox.CryFer_flattened_line_24933         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2087693 2 -   2246927 aa
i Dasypus_novemcinctus.JH564415.1                        I 410 I 47
s Daubentonia_madagascariensis.ctg71                        288665 2 +  12879189 AG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623674 2 -  35494412 AG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660278 2 -   1390856 AG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134798 2 -    198055 AG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               1867 2 +     19438 AG
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237904 2 -    607251 AG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          26332 2 +    110024 AG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                            8250 2 +     18970 AG
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906032 2 +  41312741 AG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12573438 2 +  14770903 ag
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037461 2 -   4378816 AG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371395 2 +  39960074 ag
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408181 2 -    498745 ag
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258502 2 +  21539334 AG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63220 2 -    133382 ag
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3436 2 +      7672 ag
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11626 2 -     24895 at
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39338 2 -     70999 at
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83298 2 +    112731 at
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39870 2 +     68309 at
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50195 2 -     65740 AT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20825 2 -     75513 AT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45018 2 -     97555 AT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1745 2 +     30972 AT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39468 2 -     52037 at
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55869 2 -    111500 at
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242464 2 - 206538554 AG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112246 2 - 205367284 AG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23594 2 -     30238 AG
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14803 2 +     18121 AG
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89579 2 -     95226 AG
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31443 2 -     36801 AG
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                                613 2 -      8343 AG
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250107 2 - 186649187 AG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11045 2 +     11903 AA
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11559 2 -     40692 AT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32961 2 +     49394 at
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57829 2 -     66874 at
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6706 2 -     42923 AT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13702 2 -     53142 AT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26370 2 -    327341 AC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7331 2 +     48891 AG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10827 2 +     12639 AT
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5920 2 -     36432 ag
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545758 2 -   1711038 GG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45049 2 +     49977 gg
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138007 2 -    630532 AG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               1035 2 +     12352 AG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8218 2 +     55766 AG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047562 2 + 191637585 AG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796894 2 +  11177569 AG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2718 2 -    135385 AC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374855 2 +   7955117 AG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2435083                                     906 2 +      1070 AT
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1456 2 -     16823 ag
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1232865 2 +   9596543 ag
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 63956 2 -     97402 AG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39350 2 +    110728 AG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58948 2 -     65777 AG
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756351 2 +  30322482 at
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        5007 2 -      5330 AG
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16445 2 -     16762 AG
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16743 2 -     17065 AG
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6268 2 -     11567 AG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7649 2 -     12945 AG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5005 2 +     29618 AT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5004 2 +     31569 AT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5012 2 +     24756 AT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5009 2 +     16388 AT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809117 2 -   3914936 ag
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     11713 2 +     24238 AG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             332979 2 +    662738 ag
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328682 2 -   1826925 AG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39075993 2 +  43346337 ac
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41610294 2 +  59628241 AG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              40963 2 -     61512 AG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368591 2 -  60120075 AG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20910 2 +     30207 AG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18013 2 -     24934 AG
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20797 2 +     30527 AG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31986 2 -     50087 AG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41724 2 +     51645 AG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410298 2 - 187317192 aG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395181 2 +  25927173 aG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44313 2 -     62418 AG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21000 2 +     24253 AG
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40757 2 +     59329 AG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266589 2 +    668171 AG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17935 2 +     21031 AG
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31667 2 +     33478 AG
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218938 2 -    270270 AG
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318065 2 +  24302211 AG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352897 2 -    752769 AG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669679 2 -    737560 AG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             216973 2 +    317179 AG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7488955 2 +  40650429 AG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146015 2 +    207569 AG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14044 2 -     74585 AG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 44849 2 -    140813 AG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79521 2 +     93471 ag
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 6027 2 +     17804 GG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6800 2 -     12984 AG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14762 2 -     26561 GG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980609 2 +  93316391 AT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180250 2 +    200668 GG
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15959748 2 +  27267610 AG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360609 2 -   8254450 AG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39510 2 -     48117 AG
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         17976 2 -     27822 AG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4133 2 +     27589 ag
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     48471 2 -     62432 AT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351417 2 +    437263 AG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174422 2 +    366855 AG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22483 2 -     82753 AG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14143 2 -     63510 AC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          33347 2 +     47283 AG
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35584965 2 + 120012414 AG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41679346 2 + 129401213 AG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58212979 2 +  89631738 AG
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39486455 2 + 130317789 AG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80090 2 -     86153 AG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14343088 2 +  14710649 AG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9787799 2 +  10118263 ag
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378186 2 +   6019432 AG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18429 2 -     39439 ag
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1744 2 +      3929 AG
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              108807 2 +    130748 TA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 434
s Nasalis_larvatus.k141_1350636                              24341 2 +     34575 AG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464529 2 -  31847680 ag
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225586 2 -   7148211 AG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122635 2 -    149072 AG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49292 2 -    132029 AG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5388 2 -     16345 AG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11271 2 +     22201 AG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409608 2 -  22158432 AG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21671 2 -     54323 AG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193910 2 +   9404916 AG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2566769 2 -   3988456 AG
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447302 2 +   2017862 AG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434474 2 -    630418 AG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12462 2 +    150152 ag
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    86000 2 -    140218 AG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   103330 2 +    107918 AG
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orcinus_orca.KB316932.1                                  8094851 2 +  10937097 AG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107098962 2 - 174332312 aG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        34976 2 +    559221 AG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26402451 2 -  44047080 AG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       2970 2 +     17875 AG
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467495 2 - 189151597 AG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20182 2 -    230217 AG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18457508 2 -  18783137 AG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968237 2 +   8748460 AG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1613897 2 +   2937107 AG
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   238909 2 - 183742232 aG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5376 2 +     21308 AG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286413 2 -  20919399 AG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18029 2 -     27687 AG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11165 2 +     16796 AG
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17975 2 -     23640 AG
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11100 2 +     78924 AG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         242992 2 +  18517816 AG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10714 2 -     15039 AG
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4795 2 +      7560 AG
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60502 2 -     63152 AG
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43101 2 +     45295 AG
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     780 2 +      5735 aG
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45626 2 +     46691 AG
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             60983 2 +    207309 AG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2103 2 -     25401 AG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27818 2 +     58159 AG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28094 2 +     63561 AG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27857 2 +     51148 AG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552850 2 -   4542175 AG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27841 2 +     51125 AG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2793 2 -      8168 ag
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4273 2 +     39866 AG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38761 2 -     87950 AG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39154 2 -     88961 AG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3854 2 -     39403 AG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38807 2 +     87928 AG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3851 2 -     60166 AG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10787 2 -     67232 AG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38703 2 -     90634 AG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40171 2 +     89403 AG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173112 2 - 189387572 AG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188110 2 -   9816681 AG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23281 2 +     69807 AG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40476 2 -     80239 AG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7984 2 +     14086 GT
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979509 2 +   4620579 AT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562091 2 -   2598838 GT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79178 2 -     79582 GT
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              333 2 -     11706 GT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4068 2 -     30655 GT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30393 2 +     46564 GT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90684 2 -     98465 gt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4306 2 +     35169 gt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            32343 2 +     52041 AG
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47501 2 -     66298 AG
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4183 2 -     10349 AG
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 C 0
s Pteropus_alecto.KB030862.1                               5836410 2 -  28871421 AG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3532986 2 -   4952924 AG
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095060 2 +  38429054 AG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51431 2 +     55069 AG
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37011688 2 -  90668790 AG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2908524 2 +   3329780 gg
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24499 2 +     27361 AG
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117858 2 + 195417433 aG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232107 2 -   7961872 AG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70457 2 -    116970 AG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1125626                              16499 2 +     16959 AG
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38349 2 +     72255 AG
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            10990 2 +     11432 AG
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16364 2 -     16755 AA
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14935 2 -     15289 AG
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386931 2 - 209938924 AG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7795 2 +     22212 AA
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16293 2 +     39756 AG
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6037 2 +     16473 AG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234481 2 +   5703754 AG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4071 2 +     21866 AG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111980 2 +    313613 AG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         20989 2 +     27374 AG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24504 2 +     58920 AG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11001 2 -     45317 AG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18658 2 -     42441 AG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21340 2 -     29113 AG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24412 2 -     48123 AG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    44284 2 +     77746 AG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854168 2 -   1910179 AA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855165 2 +   3870691 AG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              2046 2 -     97271 AG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120739 2 +    196729 AC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6639461 2 +  69701581 AG
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386584 2 +   1523678 AG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_547924                 547 2 -      1028 AG
i Tadarida_brasiliensis.TadBra_scaffold_547924           C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_67439                23762 2 -     25844 TA
i Tamandua_tetradactyla.TamTet_scaffold_67439            C 0 I 434
s Tapirus_indicus.TapInd_scaffold_7432                      187239 2 +    199430 aa
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101194 2 -    539355 AA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                2954 2 +      6850 AG
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3038 2 +     20590 AG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348894 2 - 186847797 AG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                    9631 2 -     31044 aa
i Tolypeutes_matacus.TolMat_scaffold_31955               I 416 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475288 2 -    610378 AG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16553 2 +     26378 AG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29234 2 -     78344 AG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15874 2 +     25722 AG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24097 2 -     62838 AG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24216 2 +     46913 AG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5024 2 -     28527 AG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26036 2 -     64340 AG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24073 2 -     63452 AG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5515 2 +     22490 AG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3135 2 +      4141 AG
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5941 2 -     13050 AG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251178 2 -   6242583 AG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56910 2 +     59866 AG
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478641 2 -  10818551 ac
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1825540 2 -   4065304 AA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2935 2 -     70247 AA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359590 2 -  33153633 ag
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103406 2 -    105689 AG
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177272 2 +   5085361 AA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  21139 2 -     30710 at
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20047 2 -    147434 AC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74674 2 +   5488506 ag
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100656 2 -    112863 AG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162139 2 -    224448 AC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24521 2 -     86975 AG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_209943                       266 1 -      3146 A-
i Zapus_hudsonius.ZapHud_scaffold_209943                 C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_2660542            245 2 +       358 ag
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      C 0 C 0
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542 0 +     83186 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        257 1 +     36723 C
s Acinonyx_jubatus.LLWD01001279.1                           808807 1 +   1699592 T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410591 1 +  29979442 T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            211495 1 +    347723 T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    10465 1 -     61208 G
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 5
s Allenopithecus_nigroviridis.k141_3755588                   43568 1 +     53615 C
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39383 1 +     44087 C
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68306 1 -     84148 C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40529 1 -     78289 C
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39977 1 +     55831 C
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38418 1 -     64179 C
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20061 1 -     24835 C
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37044 1 +     45454 C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42743 1 +     70886 C
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4870 1 +     30854 C
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29009 1 +     42133 C
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583518 1 +   2318259 C
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172245 1 -    412891 C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48614 1 -     68529 C
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46814 1 -     65372 C
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40562 1 +     43593 C
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668572 1 +   5030052 C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20214 1 -     23494 C
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5350 1 +      8415 C
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5755 1 -     32367 C
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_859459                  203 1 -       293 C
i Artibeus_jamaicensis.ArtJam_scaffold_859459            C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270805 1 +  21539123 C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6976 1 +     48076 C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2110 1 -     28759 C
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29662 1 +     44353 C
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45037 1 -     71267 C
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19093 1 -     33135 C
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2228 1 +     11645 C
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2230 1 -     19611 C
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955343 1 -  23207421 g
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2551 1 -      4711 g
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84512 1 +    124022 C
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20043 1 +    288883 C
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354430 1 +  48749331 C
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      752998 1 +   1948126 c
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543137 1 -  45695690 C
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528159 1 -   4408762 c
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   3996 1 +     28062 C
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39291 1 -     91139 C
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16816 1 +     95584 C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16729 1 +    119600 C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5921 1 -     13885 C
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14607 1 +     17162 C
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449563 1 + 189096842 C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15856 1 -     18408 C
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629337 1 +  17673402 c
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663623 1 +   7040546 c
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207283 1 +   1652518 c
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501025 1 +  60362399 T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4655 1 -     23171 T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218016 1 +   9314153 T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41611141 1 +  59632846 t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45102711 1 -  63665305 T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407229 1 -  46296322 C
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589502 1 +  44709034 C
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265353 1 +    496798 T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                143 1 +      5315 C
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    18164 1 -     39886 C
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     74988 1 -    217609 C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1141 1 -     12580 C
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39027 1 +     53515 C
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367259 1 -  26074798 A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4148 1 -     34880 A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63243 1 -     89041 A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13624 1 -     50533 T
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15487991 1 -  27778364 C
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14824 1 +     27315 C
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136728 1 -   4669795 C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40469 1 +     47900 C
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40301 1 -     44860 C
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40283 1 -    148725 C
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23269 1 -     40656 C
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3277 1 +     20796 C
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7532 1 -     17524 C
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23224 1 -     34525 C
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7944 1 -     25376 C
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360421 1 -  39242232 C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266249 1 +  21565898 C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27695 1 -     45857 C
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23486 1 -     32606 C
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27135 1 +     27662 C
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21185 1 +     70610 C
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18050 1 +     36323 C
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             2630 1 -     19938 a
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 48
s Cheirogaleus_major.k141_666340                             26650 1 -     33796 C
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              844 1 -     15404 C
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5093 1 -     32913 C
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15506 1 -     40346 C
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15770 1 +    216457 C
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15549 1 +     39636 C
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16598 1 -     17061 C
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38635 1 -    112038 C
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4207 1 +     34062 C
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338948 1 +  18827391 C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5552 1 -     44032 C
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300274 1 - 135778131 C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                  9432 1 +     15858 a
i Choloepus_didactylus.ChoDid_scaffold_70559             N 0 I 52
s Choloepus_hoffmanni.KN194906.1                            601008 1 -    839153 a
i Choloepus_hoffmanni.KN194906.1                         N 0 I 52
s Colobus_angolensis.KN981557.1                             404805 1 -   2368649 C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373995 1 - 200372422 C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4689 1 -      6605 C
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802899 1 +  53390261 T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8512 1 +     10921 C
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 38514 1 -     83289 C
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45449 1 -     47254 T
i Cryptoprocta_ferox.CryFer_flattened_line_24933         C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288667 1 +  12879189 C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623676 1 -  35494412 C
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660280 1 -   1390856 C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134800 1 -    198055 C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               1869 1 +     19438 C
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237906 1 -    607251 C
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          26334 1 +    110024 C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                            8252 1 +     18970 G
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906034 1 +  41312741 T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12573440 1 +  14770903 c
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037463 1 -   4378816 C
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371397 1 +  39960074 c
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408183 1 -    498745 c
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258504 1 +  21539334 C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63222 1 -    133382 g
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3438 1 +      7672 g
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11628 1 -     24895 c
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39340 1 -     70999 c
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83300 1 +    112731 c
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39872 1 +     68309 c
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50197 1 -     65740 C
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20827 1 -     75513 C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45020 1 -     97555 C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1747 1 +     30972 C
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39470 1 -     52037 c
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55871 1 -    111500 c
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242466 1 - 206538554 T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112248 1 - 205367284 T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23596 1 -     30238 T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14805 1 +     18121 C
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89581 1 -     95226 C
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31445 1 -     36801 C
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                                615 1 -      8343 C
i Gorilla_beringei.k141_3358147                          C 0 I 19
s Gorilla_gorilla.LT578341.1                                250109 1 - 186649187 C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11047 1 +     11903 C
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11561 1 -     40692 C
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32963 1 +     49394 c
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57831 1 -     66874 c
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6708 1 -     42923 C
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13704 1 -     53142 C
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26372 1 -    327341 T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7333 1 +     48891 C
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10829 1 +     12639 C
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5922 1 -     36432 c
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545760 1 -   1711038 C
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45051 1 +     49977 c
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138009 1 -    630532 C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               1037 1 +     12352 C
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8220 1 +     55766 C
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047564 1 + 191637585 C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796896 1 +  11177569 C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2720 1 -    135385 C
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374857 1 +   7955117 C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2435083                                     908 1 +      1070 C
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1458 1 -     16823 c
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1232867 1 +   9596543 a
i Jaculus_jaculus.JH725527.1                             C 0 I 5
s Kogia_breviceps.KogBre_flattened_line_3970                 63958 1 -     97402 C
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39352 1 +    110728 C
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58950 1 -     65777 C
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756353 1 +  30322482 c
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        5009 1 -      5330 C
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16447 1 -     16762 C
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16745 1 -     17065 C
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6270 1 -     11567 C
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7651 1 -     12945 C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5007 1 +     29618 C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5006 1 +     31569 C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5014 1 +     24756 C
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5011 1 +     16388 C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809119 1 -   3914936 t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     11715 1 +     24238 C
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             332981 1 +    662738 c
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328684 1 -   1826925 C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39075995 1 +  43346337 c
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41610296 1 +  59628241 T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              40965 1 -     61512 C
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368593 1 -  60120075 C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20912 1 +     30207 C
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18015 1 -     24934 C
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20799 1 +     30527 C
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31988 1 -     50087 C
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41726 1 +     51645 C
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410300 1 - 187317192 C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395183 1 +  25927173 C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44315 1 -     62418 C
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21002 1 +     24253 C
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40759 1 +     59329 C
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266591 1 +    668171 C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17937 1 +     21031 C
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31669 1 +     33478 C
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218940 1 -    270270 C
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318067 1 +  24302211 C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352899 1 -    752769 C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669681 1 -    737560 T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             216975 1 +    317179 T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7488957 1 +  40650429 C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146017 1 +    207569 C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14046 1 -     74585 T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 44851 1 -    140813 T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79523 1 +     93471 c
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 6029 1 +     17804 C
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6802 1 -     12984 C
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14764 1 -     26561 C
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980611 1 +  93316391 C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180252 1 +    200668 C
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15959750 1 +  27267610 C
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360611 1 -   8254450 C
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39512 1 -     48117 C
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         17978 1 -     27822 C
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4135 1 +     27589 t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     48473 1 -     62432 C
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351419 1 +    437263 C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174424 1 +    366855 C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22485 1 -     82753 C
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14145 1 -     63510 T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 2
s Murina_feae.MurFea_scaffold_17764                          33349 1 +     47283 C
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35584967 1 + 120012414 C
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41679348 1 + 129401213 C
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58212981 1 +  89631738 C
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39486457 1 + 130317789 C
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80092 1 -     86153 C
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14343090 1 +  14710649 T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9787801 1 +  10118263 c
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378188 1 +   6019432 C
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18431 1 -     39439 c
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1746 1 +      3929 C
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              109243 1 +    130748 a
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 434 I 51
s Nasalis_larvatus.k141_1350636                              24343 1 +     34575 C
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464531 1 -  31847680 t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225588 1 -   7148211 C
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122637 1 -    149072 C
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49294 1 -    132029 C
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5390 1 -     16345 C
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11273 1 +     22201 C
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409610 1 -  22158432 C
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21673 1 -     54323 C
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193912 1 +   9404916 T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2566771 1 -   3988456 T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447304 1 +   2017862 T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434476 1 -    630418 C
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12464 1 +    150152 c
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    86002 1 -    140218 C
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   103332 1 +    107918 C
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orcinus_orca.KB316932.1                                  8094853 1 +  10937097 C
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107098964 1 - 174332312 C
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        34978 1 +    559221 T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26402453 1 -  44047080 C
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       2972 1 +     17875 C
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467497 1 - 189151597 C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20184 1 -    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18457510 1 -  18783137 T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968239 1 +   8748460 T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1613899 1 +   2937107 C
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   238911 1 - 183742232 C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5378 1 +     21308 C
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286415 1 -  20919399 C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18031 1 -     27687 C
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11167 1 +     16796 C
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17977 1 -     23640 C
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11102 1 +     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         242994 1 +  18517816 C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10716 1 -     15039 C
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4797 1 +      7560 A
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60504 1 -     63152 A
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43103 1 +     45295 A
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     782 1 +      5735 A
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45628 1 +     46691 C
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             60985 1 +    207309 C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2105 1 -     25401 C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27820 1 +     58159 C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28096 1 +     63561 C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27859 1 +     51148 C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552852 1 -   4542175 C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27843 1 +     51125 C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2795 1 -      8168 c
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4275 1 +     39866 C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38763 1 -     87950 C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39156 1 -     88961 C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3856 1 -     39403 C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38809 1 +     87928 C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3853 1 -     60166 C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10789 1 -     67232 C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38705 1 -     90634 C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40173 1 +     89403 C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173114 1 - 189387572 C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188112 1 -   9816681 C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23283 1 +     69807 C
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40478 1 -     80239 C
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7986 1 +     14086 C
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979511 1 +   4620579 C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562093 1 -   2598838 C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79180 1 -     79582 C
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              335 1 -     11706 C
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4070 1 -     30655 C
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30395 1 +     46564 C
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90686 1 -     98465 c
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4308 1 +     35169 c
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            32345 1 +     52041 C
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47503 1 -     66298 C
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4185 1 -     10349 T
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 C 0
s Pteropus_alecto.KB030862.1                               5836412 1 -  28871421 C
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3532988 1 -   4952924 C
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095062 1 +  38429054 T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51433 1 +     55069 C
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37011690 1 -  90668790 C
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2908526 1 +   3329780 c
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24501 1 +     27361 C
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117860 1 + 195417433 C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232109 1 -   7961872 C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70459 1 -    116970 C
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1125626                              16501 1 +     16959 C
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38351 1 +     72255 C
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            10992 1 +     11432 C
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16366 1 -     16755 C
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14937 1 -     15289 C
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386933 1 - 209938924 C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7797 1 +     22212 C
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16295 1 +     39756 C
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6039 1 +     16473 C
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234483 1 +   5703754 C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4073 1 +     21866 C
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111982 1 +    313613 T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         20991 1 +     27374 C
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24506 1 +     58920 C
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11003 1 -     45317 C
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18660 1 -     42441 C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21342 1 -     29113 C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24414 1 -     48123 C
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    44286 1 +     77746 C
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854170 1 -   1910179 C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855167 1 +   3870691 C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              2048 1 -     97271 T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120741 1 +    196729 T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                    6639463 1 +  69701581 C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386586 1 +   1523678 C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11100 1 +     22964 C
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 3 I 93
s Tamandua_tetradactyla.TamTet_scaffold_67439                24198 1 -     25844 a
i Tamandua_tetradactyla.TamTet_scaffold_67439            I 434 I 51
s Tapirus_indicus.TapInd_scaffold_7432                      187241 1 +    199430 c
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101196 1 -    539355 C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                2956 1 +      6850 T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3040 1 +     20590 T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348896 1 - 186847797 C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                    9633 1 -     31044 a
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 51
s Tonatia_saurophila.TonSau_scaffold_294                    475290 1 -    610378 C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16555 1 +     26378 C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29236 1 -     78344 C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15876 1 +     25722 C
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24099 1 -     62838 C
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24218 1 +     46913 C
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5026 1 -     28527 C
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26038 1 -     64340 C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24075 1 -     63452 C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5517 1 +     22490 C
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3137 1 +      4141 C
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5943 1 -     13050 C
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251180 1 -   6242583 C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56912 1 +     59866 C
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478643 1 -  10818551 c
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1825542 1 -   4065304 A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       2937 1 -     70247 A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359592 1 -  33153633 c
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103408 1 -    105689 T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 5
s Ursus_maritimus.KK499267.1                                177274 1 +   5085361 T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  21141 1 -     30710 c
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20049 1 -    147434 C
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74676 1 +   5488506 c
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100658 1 -    112863 T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162141 1 -    224448 C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24523 1 -     86975 T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2660542            247 1 +       358 c
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      C 0 C 0
e Dasypus_novemcinctus.JH564415.1                          2087695 47 -   2246927 I
e Zapus_hudsonius.ZapHud_scaffold_209943                       267 1 -      3146 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64542 0 +     83186 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        258 20 +     36723 TT--CG-TC-T---GGG--A--ACTTGCT--CA
s Acinonyx_jubatus.LLWD01001279.1                           808808 22 +   1699592 TAAAGG-TT-T---GGA--T--AATTGTT--CA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 7
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410592 18 +  29979442 TA--AG-CT-T---GGA--T--AACTGCT----
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            211496 20 +    347723 TA--GG-TT-T---GTA--T--AATTATT--CA
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 7
s Allactaga_bullata.AllBul_scaffold_20030                    10471 11 -     61208 ---------------G---T--ACCTGAT--CA
i Allactaga_bullata.AllBul_scaffold_20030                I 5 I 5196
s Allenopithecus_nigroviridis.k141_3755588                   43569 20 +     53615 TT--TG-TT-T---GGG--G--ACTTGCT--CA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39384 20 +     44087 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68307 20 -     84148 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40530 20 -     78289 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39978 20 +     55831 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38419 20 -     64179 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20062 20 -     24835 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37045 20 +     45454 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42744 20 +     70886 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4871 20 +     30854 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29010 20 +     42133 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583519 20 +   2318259 TA--AG-TT-T---GGA--T--AGTTGCT--TG
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 7
s Anoura_caudifer.AnoCau_scaffold_1412                      172246 20 -    412891 TA--TG-AT-T---GGA--T--AATTGCT--CA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 7
s Antilocapra_americana.AntAmePen_scaffold_21030             48615 20 -     68529 TA--GG-TT-T---GAA--T--AATTGCT--TG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 7
s Aotus_azarae.k141_118258                                   46815 20 -     65372 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40563 20 +     43593 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668573 20 +   5030052 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20215 20 -     23494 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5351 20 +      8415 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                       5756 19 -     32367 AA--GG-TT-T---AA---G--ACTTGTT--CA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 5826
s Artibeus_jamaicensis.ArtJam_scaffold_859459                  204 20 -       293 TG--TG-TT-T---GGA--C--AATTGCT--CA
i Artibeus_jamaicensis.ArtJam_scaffold_859459            C 0 I 7
s Ateles_geoffroyi_b.tarseq_1536                               270806 20 +  21539123 TT--TA-TT-T---GGG--G--ACTTGCT--CA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6977 20 +     48076 TT--TA-TT-T---GGG--G--ACTTGCT--CA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2111 20 -     28759 TT--TA-TT-T---GGG--G--ACTTGCT--CA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29663 20 +     44353 TT--TA-TT-T---GGG--G--ACTTGCT--CA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45038 20 -     71267 TT--TA-TT-T---GGG--G--ACTTGCT--CA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19094 20 -     33135 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2229 20 +     11645 TA--GG-TT-T---GGG--A--ACTTGCT--CA
i Avahi_laniger.k141_2756659                             C 0 I 2
s Avahi_peyrierasi.k141_1823318                               2231 20 -     19611 TA--GG-TT-T---GGG--A--ACTTGCT--CA
i Avahi_peyrierasi.k141_1823318                          C 0 I 2
s Balaenoptera_acutorostrata.KI537508.1                    7955344 20 -  23207421 ta--gg-tt-t---gga--t--aattact--ca
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 7
s Balaenoptera_bonaerensis.DF507193.1                         2552 20 -      4711 ta--gg-tt-t---gga--t--aattact--ca
i Balaenoptera_bonaerensis.DF507193.1                    C 0 I 7
s Beatragus_hunteri.BeaHun_scaffold_7278                     84513 20 +    124022 TA--AT-TT-T---GGA--T--AATTGCT--TG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 7
s Bison_bison.KN261452.1                                     20044 20 +    288883 TA--AG-TT-T---GGA--T--AATTGCT--TG
i Bison_bison.KN261452.1                                 C 0 I 7
s Bos_indicus.CM003047.1                                  20354431 20 +  48749331 TA--AN-TT-T---GGA--T--AATTGCT--TG
i Bos_indicus.CM003047.1                                 C 0 I 7
s Bos_mutus.JH880303.1                                      752999 20 +   1948126 TA--AG-TT-T---GGA--T--AATTGCT--TG
i Bos_mutus.JH880303.1                                   C 0 I 7
s Bos_taurus.CM000203.6                                   27543138 20 -  45695690 TA--AT-TT-T---GGA--T--AATAGCT--TG
i Bos_taurus.CM000203.6                                  C 0 I 7
s Bubalus_bubalis.KI419123.1                               1528160 20 -   4408762 TA--AG-TT-T---GGA--T--AATTGCT--TG
i Bubalus_bubalis.KI419123.1                             C 0 I 7
s Cacajao_ayresi.k141_96119                                   3997 20 +     28062 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39292 20 -     91139 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16817 20 +     95584 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16730 20 +    119600 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5922 20 -     13885 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14608 20 +     17162 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449564 20 + 189096842 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15857 20 -     18408 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629338 20 +  17673402 ta--gg-tt-t---gga--t--aattgct--ca
i Camelus_bactrianus.KN276810.1                          C 0 I 7
s Camelus_dromedarius.KN272107.1                           4663624 20 +   7040546 ta--gg-tt-t---gga--t--aattgct--ca
i Camelus_dromedarius.KN272107.1                         C 0 I 7
s Camelus_ferus.KB017975.1                                 1207284 20 +   1652518 ta--gg-tt-t---gga--t--aattgct--ca
i Camelus_ferus.KB017975.1                               C 0 I 7
s CanFam4.chr16                                           42501026 20 +  60362399 TA--GG-TT-T---GCA--T--AATTGCT--TG
i CanFam4.chr16                                          C 0 I 7
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4656 20 -     23171 TA--GG-TT-T---GCA--T--AATTGCT--TG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 7
s Canis_lupus_dingo.QKWQ01000480.1                          218017 20 +   9314153 TA--GG-TT-T---GCA--T--AATTGCT--TG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 7
s Canis_lupus_familiaris.chr16                            41611142 20 +  59632846 ta--gg-tt-t---gca--t--aattgct--tg
i Canis_lupus_familiaris.chr16                           C 0 I 7
s Canis_lupus_orion.HG994398.1                            45102712 20 -  63665305 TA--GG-TT-T---GCA--T--AATTGCT--TG
i Canis_lupus_orion.HG994398.1                           C 0 I 7
s Capra_aegagrus.CM003241.1                               27407230 20 -  46296322 TA--AG-TT-T---GGA--T--AATTGCT--TG
i Capra_aegagrus.CM003241.1                              C 0 I 7
s Capra_hircus.CM004588.1                                 26589503 20 +  44709034 TA--AG-TT-T---AGA--T--AATTGCT--TG
i Capra_hircus.CM004588.1                                C 0 I 7
s Carlito_syrichta.NW_007259797.1                           265354 20 +    496798 TA--GG-AT-T---GGG--T--Acttgtt--ta
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                144 20 +      5315 TA--TG-AT-T---GGA--T--AATTGCT--CA
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 7
s Castor_canadensis.CasCan_scaffold_39952                    18165 22 -     39886 TA--GG-TT-T--GGG---T--ACTTGCTagca
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 1845
s Catagonus_wagneri.CatWag_scaffold_2839                     74989 20 -    217609 TA--GG-TT-T---GAA--T--AAGTGCT--CA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 8
s Cebuella_niveiventris.k141_592277                           1142 20 -     12580 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39028 20 +     53515 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367260 20 -  26074798 TT--CA-TT-T---GGG--G--ATTTGCT--CA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4149 20 -     34880 TT--CA-TT-T---GGG--G--ATTTGCT--CA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63244 20 -     89041 TT--CA-TT-T---GGG--G--ATTTGCT--CA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13625 20 -     50533 TA--GG-AT-T---GGG--T--ACTTGCT--TA
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15487992 20 -  27778364 TA--GG-TT-T---GGA--T--AATTGCT--CA
i Ceratotherium_simum.JH767749.1                         C 0 I 7
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14825 20 +     27315 TA--GG-TT-T---GGA--T--AATTGCT--CA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 7
s Cercocebus_atys.KQ010504.1                                136729 20 -   4669795 TT--CC-TT-T---GGG--G--ACTTGCT--ca
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40470 20 +     47900 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40302 20 -     44860 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40284 20 -    148725 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23270 20 -     40656 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3278 20 +     20796 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7533 20 -     17524 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23225 20 -     34525 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7945 20 -     25376 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360422 20 -  39242232 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266250 20 +  21565898 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27696 20 -     45857 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23487 20 -     32606 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27136 20 +     27662 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21186 20 +     70610 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18051 20 +     36323 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             2679 19 -     19938 TT--GT-T--T---GGG--T--ACTTGCT--CA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 48 I 7
s Cheirogaleus_major.k141_666340                             26651 20 -     33796 TA--GG-TT-T---GGG--A--ACTTGCT--CA
i Cheirogaleus_major.k141_666340                         C 0 I 2
s Cheirogaleus_medius.k141_759766                              845 20 -     15404 TA--GG-TT-T---GGG--A--ACTTGCT--CA
i Cheirogaleus_medius.k141_759766                        C 0 I 2
s Cheracebus_lucifer.k141_2312002                             5094 20 -     32913 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15507 20 -     40346 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15771 20 +    216457 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15550 20 +     39636 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16599 20 -     17061 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38636 20 -    112038 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4208 20 +     34062 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338949 20 +  18827391 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5553 20 -     44032 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300275 20 - 135778131 TT--CG-TT-T---GGG--G--ACTTGCT--ca
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                  9485 19 +     15858 TT--GT-T--T---GGG--T--CCTTGCT--CA
i Choloepus_didactylus.ChoDid_scaffold_70559             I 52 I 7
s Choloepus_hoffmanni.KN194906.1                            601061 19 -    839153 TT--GT-T--T---GGG--T--CCTTGCT--CA
i Choloepus_hoffmanni.KN194906.1                         I 52 I 7
s Colobus_angolensis.KN981557.1                             404806 20 -   2368649 TT--CA-TT-T---GGG--G--ACTTGCT--Ca
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      373996 20 - 200372422 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4690 20 -      6605 TT--CA-TT-T---GCG--G--ACTTGCT--CA
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802900 20 +  53390261 TA--GA-T-TT---GGA--T--AATTGCT--GT
i Condylura_cristata.JH655891.1                          C 0 I 7
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8513 20 +     10921 TA--TA-TT-T---AGA--T--AATTGCT--CA
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 I 7
s Cricetomys_gambianus.CriGam_scaffold_14425                 38515  3 -     83289 TA--G----------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 1427
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45450 20 -     47254 TA--GG-TT-T---GGA--T--AATTGCT--CA
i Cryptoprocta_ferox.CryFer_flattened_line_24933         C 0 I 7
s Dasypus_novemcinctus.JH564415.1                          2087742 19 -   2246927 TC--AT-T--T---GGG--T--ACTTGCT--CA
i Dasypus_novemcinctus.JH564415.1                        I 47 I 7
s Daubentonia_madagascariensis.ctg71                        288668 20 +  12879189 TA--GA-TT-T---GGG--A--ACTTGCT--CG
i Daubentonia_madagascariensis.ctg71                     C 0 I 2
s Delphinapterus_leucas.KZ290073.1                        18623677 20 -  35494412 TA--GG-TT-T---GGA--T--AGTTGCT--CA
i Delphinapterus_leucas.KZ290073.1                       C 0 I 5
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660281 20 -   1390856 TA--GG-TT-T---GGA--T--AATTGCT--CA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 7
s Diceros_bicornis.DicBicMic_scaffold_5955                  134801 20 -    198055 TA--GG-TT-T---GGA--T--AATTGCT--CA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 7
s Eidolon_helvum.AWHC01266696.1                               1870 20 +     19438 TA--TG-TT-T---GAA--T--AATTGCA--TA
i Eidolon_helvum.AWHC01266696.1                          C 0 I 7
s Elaphurus_davidianus.JRFZ01104969.1                       237907 20 -    607251 TA--GG-TT-T---GGA--T--AATTGCT--TG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 7
s Ellobius_lutescens.LOEQ01008920.1                          26335  3 +    110024 ta--g----------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1841
s Ellobius_talpinus.LOJH01026522.1                            8253  3 +     18970 Ta--g----------------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 1887
s Enhydra_lutris.KZ291758.1                               24906035 20 +  41312741 TA--GG-TT-T---GGA--T--AATTACT--CA
i Enhydra_lutris.KZ291758.1                              C 0 I 7
s Eptesicus_fuscus.JH977646.1                             12573441 20 +  14770903 ta--TG-TT-T---GGA--T--GATTGCT--CA
i Eptesicus_fuscus.JH977646.1                            C 0 I 7
s Equus_asinus.JREZ01000139.1                              3037464 20 -   4378816 TA--GT-TT-T---GGA--T--AATTGCT--CA
i Equus_asinus.JREZ01000139.1                            C 0 I 7
s Equus_caballus.CM000403.2                               21371398 20 +  39960074 ta--gg-tt-t---gga--t--aattgct--ca
i Equus_caballus.CM000403.2                              C 0 I 7
s Equus_przewalskii.KK951119.1                              408184 20 -    498745 ta--gg-tt-t---gga--t--aattgct--ca
i Equus_przewalskii.KK951119.1                           C 0 I 7
s Erythrocebus_patas.Contig38                               258505 20 +  21539334 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63223 20 -    133382 ta--gg-tt-t---gga--t--aattgct--ca
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 7
s Eubalaena_japonica.EubJap_flattened_line_118172             3439 20 +      7672 ta--gg-tt-t---gga--t--aattgct--ca
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 I 7
s Eulemur_albifrons.k141_51491                               11629 20 -     24895 ta--gg-tt-t---ggg--a--acttgct--ca
i Eulemur_albifrons.k141_51491                           C 0 I 2
s Eulemur_collaris.k141_601111                               39341 20 -     70999 ta--gg-tt-t---ggg--a--acttgct--ca
i Eulemur_collaris.k141_601111                           C 0 I 2
s Eulemur_coronatus.k141_384460                              83301 20 +    112731 ta--gg-tt-t---ggg--a--acttgct--ca
i Eulemur_coronatus.k141_384460                          C 0 I 2
s Eulemur_flavifrons.k141_433119                             39873 20 +     68309 ta--ga-tt-t---ggg--a--acttgct--ca
i Eulemur_flavifrons.k141_433119                         C 0 I 2
s Eulemur_fulvus.k141_636316                                 50198 20 -     65740 TA--GG-TT-T---GGG--A--ACTTGCT--CA
i Eulemur_fulvus.k141_636316                             C 0 I 2
s Eulemur_macaco.k141_1562045                                20828 20 -     75513 TA--GG-TT-T---GGG--A--ACTTGCT--CA
i Eulemur_macaco.k141_1562045                            C 0 I 2
s Eulemur_mongoz.k141_232305                                 45021 20 -     97555 TA--GG-TT-T---GGG--A--ACTTGCT--CA
i Eulemur_mongoz.k141_232305                             C 0 I 2
s Eulemur_rubriventer.k141_1423786                            1748 20 +     30972 TA--GG-TT-T---GGG--A--ACTTGCT--CA
i Eulemur_rubriventer.k141_1423786                       C 0 I 2
s Eulemur_rufus.k141_514691                                  39471 20 -     52037 ta--gg-tt-t---ggg--a--acttgct--ca
i Eulemur_rufus.k141_514691                              C 0 I 2
s Eulemur_sanfordi.k141_1122526                              55872 20 -    111500 ta--gg-tt-t---ggg--a--acttgct--ca
i Eulemur_sanfordi.k141_1122526                          C 0 I 2
s Felis_catus.CM001381.2                                 186242467 22 - 206538554 TAAAGG-TT-T---GGA--T--AATTGCT--ca
i Felis_catus.CM001381.2                                 C 0 I 7
s Felis_catus_fca126.CM031415.1                          185112249 22 - 205367284 TAAAGG-TT-T---GGA--T--AATTGCT--ca
i Felis_catus_fca126.CM031415.1                          C 0 I 7
s Felis_nigripes.FelNig_flattened_line_31944                 23597 22 -     30238 TAAAGG-TT-T---GGA--T--AATTGCT--CA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 7
s Galeopterus_variegatus.GalVar_scaffold_74466               14806 20 +     18121 TA--CG-TT-T---GGG--T--ACTTGCT--TA
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 14
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89582 20 -     95226 TA--GG-TT-T---GGA--T--AATTGCT--TG
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 7
s Glis_glis.GliGli_scaffold_33859                            31446 22 -     36801 TA--GG-GG-CTTGGG---T--ACTTGCT--CA
i Glis_glis.GliGli_scaffold_33859                        C 0 I 480
s Gorilla_beringei.k141_3358224                                616 20 -      1229 TT--CA-TC-T---GGG--G--ACTTGCT--CA
i Gorilla_beringei.k141_3358224                          I 4 I 31
s Gorilla_gorilla.LT578341.1                                250110 20 - 186649187 TT--CG-TC-T---GGG--G--ACTTGCT--ca
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11048 23 +     11903 TA-CGG-GG-TGTGGA---T--ACTTGCT--CA
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 I 178
s Hapalemur_alaotrensis.k141_330369                          11562 20 -     40692 TA--GG-TT-T---GGG--A--ACTTGCT--CA
i Hapalemur_alaotrensis.k141_330369                      C 0 I 2
s Hapalemur_gilberti.k141_646465                             32964 20 +     49394 ta--gg-tt-t---ggg--a--acttgct--ca
i Hapalemur_gilberti.k141_646465                         C 0 I 2
s Hapalemur_griseus.k141_763500                              57832 20 -     66874 ta--gg-tt-t---ggg--a--acttgct--ca
i Hapalemur_griseus.k141_763500                          C 0 I 2
s Hapalemur_meridionalis.k141_258450                          6709 20 -     42923 TA--GG-TT-T---GGG--A--ACTTGCT--CA
i Hapalemur_meridionalis.k141_258450                     C 0 I 2
s Hapalemur_occidentalis.k141_578367                         13705 20 -     53142 TA--GG-TT-T---GGG--A--ACTTGCT--CA
i Hapalemur_occidentalis.k141_578367                     C 0 I 2
s Helogale_parvula.HelPar_flattened_line_2585                26375  9 -    327341 ----------------------AATTGCT--CA
i Helogale_parvula.HelPar_flattened_line_2585            I 2 I 7
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7334 20 +     48891 TA--AG-TT-T---GGA--T--AGTTGCT--TG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 7
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10830 20 +     12639 CA--GGTT--T---GAG--T--ACTTGCT--CC
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 I 7
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5923 20 -     36432 tt--gg-ct-c---gga--t--aattgct--ca
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 7
s Hipposideros_armiger.JXIK01000431.1                      1545761 20 -   1711038 TA--TG-TT-T---GGA--T--AATTGCT--TA
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 7
s Hipposideros_galeritus.HipGal_scaffold_23202               45052 20 +     49977 ta--tg-tt-t---gga--t--aattgct--ta
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 7
s Hoolock_leuconedys.ctg274                                    138010 20 -    630532 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  64542 14 +     83186 ----------C---AAA--T--ATTTGCA--TA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 7
s Hylobates_agilis.k141_1155965                               1038 20 +     12352 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8221 20 +     55766 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047565 20 + 191637585 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796897 20 +  11177569 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       2721 21 -    135385 TT--GG-TG-T---AG---ATACCTTACT--CA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 286
s Ictidomys_tridecemlineatus.JH393364.1                     374858 19 +   7955117 TA--GG-TT-T---GG---G--ACTTGCT--GT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 103
s Indri_indri.k141_2435083                                     909 20 +      1070 TA--GG-TT-T---GGG--A--ACTTGCT--CT
i Indri_indri.k141_2435083                               C 0 I 2
s Inia_geoffrensis.IniGeo_flattened_line_69447                1459 20 -     16823 ta--gg-tt-t---gga--t--aattgct--ca
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 7
s Jaculus_jaculus.JH725527.1                               1232873 11 +   9596543 ---------------G---T--ACTTGAT--CA
i Jaculus_jaculus.JH725527.1                             I 5 I 3952
s Kogia_breviceps.KogBre_flattened_line_3970                 63959 20 -     97402 TA--GG-TT-T---GGG--T--AATTGCT--CA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 7
s Lagothrix_lagothricha.k141_246028                          39353 20 +    110728 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58951 20 -     65777 TA--TG-TT-T---GGA--T--GATTGCT--CA
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 7
s Lemur_catta.scaffold_24                                 14756354 20 +  30322482 ta--gg-tt-t---ggg--a--acttgct--ca
i Lemur_catta.scaffold_24                                C 0 I 2
s Leontocebus_fuscicollis.k141_3469711                        5010 20 -      5330 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16448 20 -     16762 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16746 20 -     17065 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6271 20 -     11567 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7652 20 -     12945 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5008 20 +     29618 TA--GG-TT-T---AGG--A--ACTTGCT--CA
i Lepilemur_ankaranensis.k141_567626                     C 0 I 2
s Lepilemur_dorsalis.k141_387009                              5007 20 +     31569 TA--GG-TT-T---AGG--A--ACTTGCT--CA
i Lepilemur_dorsalis.k141_387009                         C 0 I 2
s Lepilemur_ruficaudatus.k141_330196                          5015 20 +     24756 TA--GG-TT-T---AGG--A--ACTTGCT--CA
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 2
s Lepilemur_septentrionalis.k141_360456                       5012 20 +     16388 TA--GG-TT-T---AGG--A--ACTTGCT--CA
i Lepilemur_septentrionalis.k141_360456                  C 0 I 2
s Leptonychotes_weddellii.KB714746.1                        809120 20 -   3914936 ta--gg-tt-t---gga--t--aattgct--ca
i Leptonychotes_weddellii.KB714746.1                     C 0 I 7
s Lepus_americanus.LepAme_scaffold_56121                     11716 21 +     24238 TA--CG-TT-T---GG-ATG--CTTTGCT--GT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 1857
s Lipotes_vexillifer.KE559953.1                             332982 20 +    662738 ta--gg-tt-t---gga--t--aactgct--ta
i Lipotes_vexillifer.KE559953.1                          C 0 I 7
s Lophocebus_aterrimus.ctg367                               328685 20 -   1826925 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39075996 20 +  43346337 ta--ggtt--t---gag--t--atttgtt--ca
i Loxodonta_africana.GL010049.1                          C 0 I 7
s Lycaon_pictus.CM007581.1                                41610297 20 +  59628241 TA--GG-TT-T---GCA--T--AATTGCT--TG
i Lycaon_pictus.CM007581.1                               C 0 I 7
s Macaca_arctoides.k141_1757516                              40966 20 -     61512 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368594 20 -  60120075 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20913 20 +     30207 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18016 20 -     24934 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20800 20 +     30527 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 31989 20 -     50087 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41727 20 +     51645 TT--CC-TT-T---GGG--A--ACTTGCT--CA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410301 20 - 187317192 TT--CC-TT-T---GGG--G--ACTTGCT--ca
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395184 20 +  25927173 TT--CC-TT-T---GGG--G--ACTTGCT--ca
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44316 20 -     62418 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21003 20 +     24253 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40760 20 +     59329 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266592 20 +    668171 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17938 20 +     21031 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31670 20 +     33478 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218941 20 -    270270 TA--TG-TT-T---GAA--T--AATTACA--TA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 7
s Mandrillus_leucophaeus.scaffold280                        318068 20 +  24302211 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352900 20 -    752769 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669682 20 -    737560 TA--GG-TT-T---GAA--T--ACTGTCT--CA
i Manis_javanica.JSZB01003497.1                          C 0 I 7
s Manis_pentadactyla.KN006162.1                             216976 20 +    317179 TA--GG-TT-T---GAA--T--ACTGTCT--CA
i Manis_pentadactyla.KN006162.1                          C 0 I 7
s Marmota_marmota.CZRN01000018.1                           7488958 19 +  40650429 TA--GG-TT-T---GG---G--ACTTGCT--GT
i Marmota_marmota.CZRN01000018.1                         C 0 I 96
s Megaderma_lyra.MegLyr_scaffold_4542                       146018 20 +    207569 TA--TG-TT-T---GGA--T--AATTGCT--TG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 7
s Mellivora_capensis.MelCap_flattened_line_19308             14047 20 -     74585 TA--GT-TT-T---GGA--T--AATTACT--CA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 7
s Meriones_unguiculatus.MerUng_scaffold_7390                 44852  3 -    140813 TG--G----------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 1372
s Mesoplodon_bidens.MesBid_scaffold_6114                     79524 20 +     93471 ta--gg-tt-t---gga--t--aattgct--ca
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 7
s Mico_argentatus.k141_582562                                 6030 20 +     17804 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6803 20 -     12984 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14765 20 -     26561 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980612 20 +  93316391 TA--GG-TT-T---GGG--A--ACTTGCT--CA
i Microcebus_murinus.CM007674.1                          C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_2233                180253 20 +    200668 TA--TG-TT-T---GGA--T--AATTGCT--CA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 7
s Microtus_ochrogaster.CM001695.1                         15959751  3 +  27267610 TA--G----------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 826
s Miniopterus_natalensis.LDJU01000034.1                    6360612 20 -   8254450 TA--TG-TT-T---GAA--T--AATTGCT--CA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 7
s Miniopterus_schreibersii.MinSch_scaffold_23309             39513 20 -     48117 TA--TG-TT-T---GAA--T--AATTGCT--CA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 7
s Miopithecus_ogouensis.k141_1534655                         17979 20 -     27822 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4136 20 +     27589 ta--gg-tt-t---gga--t--aattgct--ca
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 7
s Mirza_zaza.k141_766280                                     48474 20 -     62432 TA--GG-TT-T---GGG--A--ACTTGCT--CA
i Mirza_zaza.k141_766280                                 C 0 I 2
s Monodon_monoceros.MonMon_M_scaffold_103                   351420 20 +    437263 TA--GG-TT-T---GGA--T--AGTTGCT--CA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 5
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174425 20 +    366855 TA--GG-TT-T---GGA--T--AATCACT--CA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 7
s Moschus_moschiferus.MosMos_scaffold_13123                  22486 20 -     82753 TA--AG-TT-T---AGA--T--AATTGCT--TG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 7
s Mungos_mungo.MunMun_flattened_line_18455                   14148  9 -     63510 ----------------------AATTGCT--CA
i Mungos_mungo.MunMun_flattened_line_18455               I 2 I 7
s Murina_feae.MurFea_scaffold_17764                          33350 20 +     47283 TA--TG-TT-T---GGA--T--GATTGCT--CA
i Murina_feae.MurFea_scaffold_17764                      C 0 I 7
s Mus_caroli.LT608237.1                                   35584968  3 + 120012414 TA--A----------------------------
i Mus_caroli.LT608237.1                                  C 0 I 6698
s Mus_musculus.chr8                                       41679349  3 + 129401213 TA--G----------------------------
i Mus_musculus.chr8                                      C 0 I 2706
s Mus_pahari.LT608297.1                                   58212982  3 +  89631738 TA--G----------------------------
i Mus_pahari.LT608297.1                                  C 0 I 2740
s Mus_spretus.CM004101.1                                  39486458  3 + 130317789 TA--G----------------------------
i Mus_spretus.CM004101.1                                 C 0 I 3210
s Muscardinus_avellanarius.MusAve_scaffold_12866             80093 22 -     86153 AT--GG-GG-CTTGGG---T--ACTTGCT--CA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 395
s Mustela_putorius.JH418006.1                             14343091 20 +  14710649 TA--GG-TT-T---GGA--T--AATTACT--CA
i Mustela_putorius.JH418006.1                            C 0 I 7
s Myotis_brandtii.KE162005.1                               9787802 20 +  10118263 ta--TG-TT-T---GGA--T--GATTGCT--CA
i Myotis_brandtii.KE162005.1                             C 0 I 7
s Myotis_davidii.KB100139.1                                4378189 20 +   6019432 TA--TG-TT-T---GGA--T--CATTGCT--CA
i Myotis_davidii.KB100139.1                              C 0 I 7
s Myotis_lucifugus.GL432175.1                                18432 20 -     39439 tA--TG-TT-T---GGA--T--GATTGCT--CA
i Myotis_lucifugus.GL432175.1                            C 0 I 7
s Myotis_myotis.MyoMyo_scaffold_185951                        1747 20 +      3929 TA--TG-TT-T---AGA--T--GATTGCT--CA
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 I 7
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              109295 19 +    130748 TT--GT-T--T---GGG--T--CCTTGCT--CA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 51 I 7
s Nasalis_larvatus.k141_1350636                              24344 20 +     34575 TT--CG-TG-T---GGG--G--ACTTGCT--CA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464532 20 -  31847680 ta--gg-tt-t---gga--t--aattgct--ca
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 7
s Neophocaena_asiaeorientalis.KZ687982.1                   1225589 20 -   7148211 TA--GG-TT-T---GGA--T--AGTTGCT--CA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 5
s Noctilio_leporinus.NocLep_scaffold_7894                   122638 20 -    149072 TA--CG-TT-T---GGA--T--AATGGCT--CA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 7
s Nomascus_annamensis.k141_1771965                           49295 20 -    132029 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5391 20 -     16345 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11274 20 +     22201 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409611 20 -  22158432 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21674 20 -     54323 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193913 20 +   9404916 TA--GA-TT-T---GCA--T--AATTGCC--TG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 7
s Ochotona_princeps.JH802162.1                             2566772  9 -   3988456 TG--GA-TT-G---GG-----------------
i Ochotona_princeps.JH802162.1                           C 0 T 17500
s Odobenus_rosmarus.KB229312.1                             1447305 20 +   2017862 TA--GG-TT-T---GGA--T--AATTTCT--CA
i Odobenus_rosmarus.KB229312.1                           C 0 I 7
s Odocoileus_virginianus.KZ100018.1                         434477 20 -    630418 TA--GG-TT-T---AGA--T--AATCGCT--TC
i Odocoileus_virginianus.KZ100018.1                      C 0 I 7
s Okapia_johnstoni.LVCL01S0005463.1                          12465 20 +    150152 ta--gg-tt-t---gga--t--aattgct--tg
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 7
s Ondatra_zibethicus.OndZib_scaffold_7387                    86003  3 -    140218 TA--G----------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 3889
s Onychomys_torridus.OnyTor_scaffold_2487                   103333  3 +    107918 AA--G----------------------------
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 I 1393
s Orcinus_orca.KB316932.1                                  8094854 20 +  10937097 TA--GG-TT-T---GGA--T--AATTGCT--CA
i Orcinus_orca.KB316932.1                                C 0 I 7
s Oryctolagus_cuniculus.CM000791.1                       107098965 21 - 174332312 TA--TG-TT-T---GG-ATG--CTTTGCT--gt
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1497
s Otocyon_megalotis.JAEUCK010005147.1                        34979 20 +    559221 TA--GG-TT-T---GCA--T--AATTGCT--TG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 7
s Ovis_aries.CM001607.2                                   26402454 20 -  44047080 TA--AG-TT-T---GGA--T--AGTTGCT--TG
i Ovis_aries.CM001607.2                                  C 0 I 7
s Ovis_canadensis.OviCan_scaffold_67953                       2973 20 +     17875 TA--AG-TT-T---GGA--T--AGTTGCT--TG
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 7
s Pan_troglodytes.CM009242.2                               1467498 20 - 189151597 TT--CG-TT-T---GGG--G--ACTTGCT--ca
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20185 22 -    230217 TAAAGG-TT-T---GGA--T--AATTGCT--CA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 7
s Panthera_pardus.KV860321.1                              18457511 22 -  18783137 TAAAGG-TT-T---GGA--T--AATTGCT--ca
i Panthera_pardus.KV860321.1                             C 0 I 7
s Panthera_tigris.KE722367.1                               3968240 22 +   8748460 TAAAGG-TT-T---GGA--T--AATTGCT--ca
i Panthera_tigris.KE722367.1                             C 0 I 7
s Pantholops_hodgsonii.KE114653.1                          1613900 20 +   2937107 TA--AG-TT-T---GGA--T--AACTGCT--TG
i Pantholops_hodgsonii.KE114653.1                        C 0 I 7
s Papio_anubis.CM001495.2                                   238912 20 - 183742232 TT--CC-TT-T---GGG--G--ACTTGCT--ca
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5379 20 +     21308 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286416 20 -  20919399 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18032 20 -     27687 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11168 20 +     16796 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17978 20 -     23640 TT--CC-TT-T---GGG--G--ACTTGCT--CA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11103 20 +     78924 TA--GG-TT-T---ATG--T--AATTGCT--CA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 7
s Peromyscus_maniculatus.KI615324.1                         242995  3 +  18517816 Aa--g----------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1377
s Phocoena_phocoena.PhoPho_flattened_line_46867              10717 20 -     15039 TA--GG-TT-T---GGA--T--AGTTGCT--CA
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 I 5
s Piliocolobus_badius.k141_2495623                            4798 20 +      7560 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60505 20 -     63152 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43104 20 +     45295 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     783 20 +      5735 TT--CG-TT-T---GGG--G--ACTTGCT--ca
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45629 20 +     46691 TA--TG-TT-T---GGA--A--GATTGCT--CA
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 I 7
s Pithecia_albicans.k141_1239476                             60986 20 +    207309 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2106 20 -     25401 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27821 20 +     58159 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28097 20 +     63561 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27860 20 +     51148 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552853 20 -   4542175 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27844 20 +     51125 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2796 20 -      8168 ta--gg-tt-t---gga--t--aattgct--ca
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 I 7
s Plecturocebus_bernhardi.k141_2549090                        4276 20 +     39866 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38764 20 -     87950 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39157 20 -     88961 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3857 20 -     39403 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38810 20 +     87928 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3854 20 -     60166 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10790 20 -     67232 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38706 20 -     90634 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40174 20 +     89403 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173115 20 - 189387572 TT--CG-TT-T---GGG--G--AGTTGCT--ca
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188113 20 -   9816681 TT--CG-TT-T---GGG--G--AGTTGCT--CA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23284 20 +     69807 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40479 20 -     80239 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 7987 20 +     14086 CA--GGTT--T---GAG--T--ATTTGCT--CC
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 I 7
s Prolemur_simus.MPIZ01000396.1                            1979512 20 +   4620579 TA--GG-TT-T---GGG--A--ACTTGCT--CA
i Prolemur_simus.MPIZ01000396.1                          C 0 I 2
s Propithecus_coquerelli.NW_012148875.1                    1562094 20 -   2598838 TA--CG-TT-T---GGG--A--ACTTGTT--CA
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 2
s Propithecus_coronatus.k141_149744                          79181 20 -     79582 TA--CG-TT-T---GGG--A--ACTTGTT--CA
i Propithecus_coronatus.k141_149744                      C 0 I 2
s Propithecus_diadema.k141_153680                              336 20 -     11706 TA--CA-TT-T---GGG--A--ACTTGTT--CA
i Propithecus_diadema.k141_153680                        C 0 I 2
s Propithecus_edwardsi.k141_635656                            4071 20 -     30655 TA--CA-TT-T---GGG--A--ACTTGTT--CA
i Propithecus_edwardsi.k141_635656                       C 0 I 2
s Propithecus_perrieri.k141_1496898                          30396 20 +     46564 TA--CA-TT-T---GGG--A--ACTTGTT--CA
i Propithecus_perrieri.k141_1496898                      C 0 I 2
s Propithecus_tattersalli.k141_1127767                       90687 20 -     98465 ta--gg-tt-t---ggg--a--acttgtt--ca
i Propithecus_tattersalli.k141_1127767                   C 0 I 2
s Propithecus_verreauxi.k141_1047036                          4309 20 +     35169 ta--gg-tt-t---ggg--a--acttgtt--ca
i Propithecus_verreauxi.k141_1047036                     C 0 I 2
s Psammomys_obesus.NESX01036366.1                            32346  3 +     52041 tg--g----------------------------
i Psammomys_obesus.NESX01036366.1                        C 0 I 1414
s Pteronotus_parnellii.KE847780.1                            47504 20 -     66298 TA--TG-TT-T---GGA--T--AATTGCT--CA
i Pteronotus_parnellii.KE847780.1                        C 0 I 7
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4186 20 -     10349 TA--GA-TT-T---GGA--T--AATTACT--CA
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 I 7
s Pteropus_alecto.KB030862.1                               5836413 20 -  28871421 TA--TG-TT-T---GAA--T--AATTGca--ta
i Pteropus_alecto.KB030862.1                             C 0 I 7
s Pteropus_vampyrus.KN525825.1                             3532989 20 -   4952924 TA--CG-TT-T---GAA--T--AATTGca--ta
i Pteropus_vampyrus.KN525825.1                           C 0 I 7
s Puma_concolor.QAVW01001104.1                            18095063 22 +  38429054 TAAAGG-TT-T---GGA--T--AATTGCT--ca
i Puma_concolor.QAVW01001104.1                           C 0 I 7
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51434 20 +     55069 TA--GG-TT-T---AGA--T--AATCACT--TG
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 7
s Rattus_norvegicus.chr16                                 37011691  3 -  90668790 TA--g----------------------------
i Rattus_norvegicus.chr16                                C 0 I 8457
s Rhinolophus_sinicus.LVEH01000134.1                       2908527 20 +   3329780 ta--tg-ta-t---gga--t--aatggct--ta
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 7
s Rhinopithecus_bieti.k119_221883                            24502 20 +     27361 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117861 20 + 195417433 TT--CG-TT-T---GGG--G--ACTTGCT--ca
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232110 20 -   7961872 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70460 20 -    116970 TA--TG-TT-T---GAA--T--AATTGCA--TG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 7
s Saguinus_bicolor.k141_1125626                              16502 20 +     16959 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38352 20 +     72255 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            10993 20 +     11432 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16367 20 -     16755 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14938 20 -     15289 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386934 20 - 209938924 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7798 20 +     22212 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16296 20 +     39756 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6040 20 +     16473 TA--AG-TT-T---GGA--T--AATTGCT--TG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 7
s Sapajus_apella.ctg103                                     234484 20 +   5703754 TT--CA-TT-T---GGG--G--ATTTGCT--CA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4074 20 +     21866 TT--CA-TT-T---GGG--G--ATTTGCT--CA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    111983 20 +    313613 TA--GA-T-TT---GGA--T--AATTGCT--CT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 7
s Semnopithecus_entellus.k141_158471                         20992 20 +     27374 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24507 20 +     58920 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11004 20 -     45317 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18661 20 -     42441 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21343 20 -     29113 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24415 20 -     48123 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    44287  3 +     77746 TA--C----------------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 1653
s Solenodon_paradoxus.SolPar_flattened_line_126            1854171 19 -   1910179 TA--GG-C--T---GGA--T--AATTGCT--CA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 7
s Spermophilus_dauricus.KZ294078.1                         1855168 19 +   3870691 TA--GG-TT-T---GG---G--ACTTTCT--GA
i Spermophilus_dauricus.KZ294078.1                       C 0 I 217
s Spilogale_gracilis.SpiGra_flattened_line_13525              2049 20 -     97271 TA--GG-TT-T---GGA--T--AATTACT--CA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 7
s Suricata_suricatta.SurSur_flattened_line_6629             120744  9 +    196729 ----------------------AGTTGCT--CA
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 I 7
s Sus_scrofa.CM000828.4                                    6639464 18 +  69701581 TA--GG-TT-T---GGA--T--AACTGCT----
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386587 20 +   1523678 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_547924                 550 20 -      1028 TA--TG-TT-T---GGA--T--AATTGCT--CA
i Tadarida_brasiliensis.TadBra_scaffold_547924           I 1 I 82
s Tamandua_tetradactyla.TamTet_scaffold_67439                24250 19 -     25844 TT--GT-T--T---GGG--T--CCTTGCT--Ca
i Tamandua_tetradactyla.TamTet_scaffold_67439            I 51 I 7
s Tapirus_indicus.TapInd_scaffold_7432                      187242 20 +    199430 ta--gg-tt-t---gga--t--aattgct--ca
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 7
s Tapirus_terrestris.TapTer_scaffold_755                    101197 20 -    539355 TA--GG-TT-T---GGA--T--AATTGCT--CA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 7
s Tarsius_lariang.k141_1780720                                2957 20 +      6850 TA--GG-AT-T---GGG--T--ACTTGCT--TA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3041 20 +     20590 TA--GG-AT-T---GGG--T--ACTTGCT--TA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348897 20 - 186847797 TT--CC-TT-T---GGG--G--ACTTGCT--ca
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                    9685 19 -     31044 TT--GT-T--T---GGG--T--ACTTGCT--CA
i Tolypeutes_matacus.TolMat_scaffold_31955               I 51 I 7
s Tonatia_saurophila.TonSau_scaffold_294                    475291 20 -    610378 TA--TG-TT-T---GGA--T--AATTGCT--CA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 7
s Trachypithecus_auratus.k141_1189070                        16556 20 +     26378 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29237 20 -     78344 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15877 20 +     25722 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24100 20 -     62838 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24219 20 +     46913 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5027 20 -     28527 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26039 20 -     64340 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24076 20 -     63452 TT--CA-TT-T---GGG--G--ACTTGCT--CA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5518 20 +     22490 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3138 20 +      4141 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5944 20 -     13050 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251181 20 -   6242583 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56913 20 +     59866 TT--CG-TT-T---GGG--G--ACTTGCT--CA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478644 20 -  10818551 ta--ggtt--t---gag--t--acttgtt--cc
i Trichechus_manatus.JH594705.1                          C 0 I 7
s Tupaia_chinensis.KB320699.1                              1825543 20 -   4065304 TA--GG-CT-T---GGG--T--ATTTGCT--TA
i Tupaia_chinensis.KB320699.1                            C 0 I 239
s Tupaia_tana.TupTan_flattened_line_394                       2938 20 -     70247 TA--GG-CT-T---GGG--T--ATTTGCT--TA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 222
s Tursiops_truncatus.MRVK01000835.1                       17359593 20 -  33153633 ta--gg-tt-t---gga--t--aattgct--ca
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 7
s Uropsilus_gracilis.UroGra_scaffold_7153                   103414  7 -    105689 ------------------------TTGCT--CT
i Uropsilus_gracilis.UroGra_scaffold_7153                I 5 I 7
s Ursus_maritimus.KK499267.1                                177275 18 +   5085361 TA--GG-CT-T---GGA--T--AACTGCT----
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  21142 20 -     30710 ta--gg-tt-t---ggg--a--acttgct--ca
i Varecia_rubra.k141_787544                              C 0 I 2
s Varecia_variegata.k141_289850                              20050 20 -    147434 TA--GG-TT-T---GGG--A--ACTTGCT--CA
i Varecia_variegata.k141_289850                          C 0 I 2
s Vicugna_pacos.KN270157.1                                   74677 20 +   5488506 ta--gg-tt-t---gga--t--aattgct--ca
i Vicugna_pacos.KN270157.1                               C 0 I 7
s Vulpes_lagopus.VulLag_flattened_line_12041                100659 20 -    112863 TA--GG-TT-T---GCA--T--AATTGCT--TG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 7
s Xerus_inauris.XerIna_scaffold_2302                        162142 19 -    224448 TC--AG-TT-T---GG---G--ACTTGCT--CG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 110
s Zalophus_californianus.ZalCal_flattened_line_17732         24524 20 -     86975 TA--GG-TT-T---GGA--T--AATTTCT--CA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 7
s Zapus_hudsonius.ZapHud_scaffold_209943                       268 11 -      3146 ---------------G---T--ACTTGAT--CA
i Zapus_hudsonius.ZapHud_scaffold_209943                 I 1 N 0
s Ziphius_cavirostris.ZipCav_flattened_line_2660542            248 20 +       358 ta--gg-tt-t---gga--t--aattgct--ca
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      C 0 I 7
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        278 7 +     36723 GTGGTAA
s Allenopithecus_nigroviridis.k141_3755588                   43589 7 +     53615 GTGGTAA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39404 7 +     44087 GTGGTAA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         12833 7 -     21945 GTGGTAA
i Allochrocebus_preussi.k141_1993939                     N 0 C 0
s Allochrocebus_solatus.k141_3554717                         14511 7 +     32033 GTGGTAA
i Allochrocebus_solatus.k141_3554717                     N 0 C 0
s Alouatta_belzebul.k141_1011583                             68327 7 -     84148 GTGGTAA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40550 7 -     78289 GTGGTAA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             39998 7 +     55831 GTGGTAA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38439 7 -     64179 GTGGTAA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20082 7 -     24835 GTGGTAA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37065 7 +     45454 GTGGTAA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42764 7 +     70886 GTGGTAA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4891 7 +     30854 GTGGTAA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29030 7 +     42133 GTGGTAA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   46835 7 -     65372 GTGGTAA
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40583 7 +     43593 GTGGTAA
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668593 7 +   5030052 GTGGTAA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20235 7 -     23494 GTGGTAA
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5371 7 +      8415 GTGGTAA
i Aotus_vociferans.k141_944972                           C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270826 7 +  21539123 GTAGTAA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               6997 7 +     48076 TTGGTAA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2131 7 -     28759 GTAGTAA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29683 7 +     44353 GTAGTAA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45058 7 -     71267 TTGGTAA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19114 7 -     33135 TTGGTAA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Cacajao_ayresi.k141_96119                                   4017 7 +     28062 GTGGTAA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39312 7 -     91139 GTGGTAA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16837 7 +     95584 GTGGTAA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16750 7 +    119600 GTGGTAA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5942 7 -     13885 GTGGTGG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14628 7 +     17162 GTGGTGG
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449584 7 + 189096842 GTGGTGG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15877 7 -     18408 GTGGTGG
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Cebuella_niveiventris.k141_592277                           1162 7 -     12580 GTGGTGG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39048 7 +     53515 GTGGTGG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367280 7 -  26074798 GTGGTAG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4169 7 -     34880 GTGGTAG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63264 7 -     89041 GTGGTAG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cercocebus_atys.KQ010504.1                                136749 7 -   4669795 gtggtaa
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40490 7 +     47900 GTGGTAA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40322 7 -     44860 GTGGTAA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40304 7 -    148725 GTGGTAA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23290 7 -     40656 GTGGTAA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3298 7 +     20796 GTGGTAA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7553 7 -     17524 GTGGTAA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23245 7 -     34525 GTGGTAA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7965 7 -     25376 GTGGTAA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360442 7 -  39242232 GTGGTAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266270 7 +  21565898 GTGGTAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27716 7 -     45857 GTGGTAA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23507 7 -     32606 GTGGTAA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27156 7 +     27662 GTGGTAA
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21206 7 +     70610 GTGGTAA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18071 7 +     36323 GTGGTAA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5114 7 -     32913 GTGGTGA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15527 7 -     40346 GTGGTTA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15791 7 +    216457 GTGGTGA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15570 7 +     39636 GTGGTGA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16619 7 -     17061 GTGGTGG
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38656 7 -    112038 GTGGTAA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4228 7 +     34062 GTGGTAA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338969 7 +  18827391 GTGGTAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5573 7 -     44032 GTGGTAA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300295 7 - 135778131 gtggtaa
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404826 7 -   2368649 gtggtaa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374016 7 - 200372422 GTGGTAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4710 7 -      6605 GTGGTAA
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Erythrocebus_patas.Contig38                               258525 7 +  21539334 GTGGTAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3358147                                635 7 -      8343 GTGGTAA
i Gorilla_beringei.k141_3358147                          I 19 C 0
s Gorilla_gorilla.LT578341.1                                250130 7 - 186649187 gtggtaa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    138030 7 -    630532 GTGGTAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               1058 7 +     12352 GTGGTAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8241 7 +     55766 GTGGTAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047585 7 + 191637585 GTGTTAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796917 7 +  11177569 GTGTTAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39373 7 +    110728 GTGGTAA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        5030 7 -      5330 GTGGTGG
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16468 7 -     16762 GTGGTGG
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16766 7 -     17065 GTGGTGG
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6291 7 -     11567 GTGGTGG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7672 7 -     12945 GTGGTGG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               328705 7 -   1826925 GTGGTAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              40986 7 -     61512 GTGGTAA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368614 7 -  60120075 GTGGTAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20933 7 +     30207 GTGGTAA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18036 7 -     24934 GTGGTAA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20820 7 +     30527 GTGGTAA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32009 7 -     50087 GTGGTAG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41747 7 +     51645 GTGGTAA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410321 7 - 187317192 gtggtaa
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395204 7 +  25927173 gtggtaa
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44336 7 -     62418 GTGGTAG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21023 7 +     24253 GTGGTAA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40780 7 +     59329 GTGGTAG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266612 7 +    668171 GTGGTAG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17958 7 +     21031 GTGGTAA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31690 7 +     33478 GTGGTAG
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318088 7 +  24302211 GTGGTAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352920 7 -    752769 GTGGTAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_582562                                 6050 7 +     17804 GTGGTGG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6823 7 -     12984 GTGGTGG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14785 7 -     26561 GTGGTGG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         17999 7 -     27822 GTGGTAA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Nasalis_larvatus.k141_1350636                              24364 7 +     34575 GTGATAA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           49315 7 -    132029 GTGGTAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5411 7 -     16345 GTGGTAA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11294 7 +     22201 GTGGTAA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409631 7 -  22158432 GTGGTAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21694 7 -     54323 GTGGTAA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_troglodytes.CM009242.2                               1467518 7 - 189151597 gtggtaa
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   238932 7 - 183742232 gtggtaa
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5399 7 +     21308 GTGGTAA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286436 7 -  20919399 GTGGTAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18052 7 -     27687 GTGGTAA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11188 7 +     16796 GTGGTAA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 17998 7 -     23640 GTGGTAA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Piliocolobus_badius.k141_2495623                            4818 7 +      7560 GTGGTAA
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60525 7 -     63152 GTGGTAA
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43124 7 +     45295 GTGGTAA
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     803 7 +      5735 gtggtaa
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             61006 7 +    207309 GTGGTAA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2126 7 -     25401 GTGGTAA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27841 7 +     58159 GTGGTAA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28117 7 +     63561 GTGGTAA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27880 7 +     51148 GTGGTAA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552873 7 -   4542175 GTGGTAA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27864 7 +     51125 GTGGTAA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4296 7 +     39866 GTGGTGA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38784 7 -     87950 GTGGTGA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39177 7 -     88961 GTGGTGA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3877 7 -     39403 GTGGTGA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38830 7 +     87928 GTGGTGA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3874 7 -     60166 GTGGTGA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10810 7 -     67232 GTGGTGA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38726 7 -     90634 GTGGTGA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40194 7 +     89403 GTGGTGA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173135 7 - 189387572 gtggtaa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188133 7 -   9816681 GTGGTAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23304 7 +     69807 GTGATAA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40499 7 -     80239 GTGATAA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24522 7 +     27361 GTGATAA
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117881 7 + 195417433 gtgataa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232130 7 -   7961872 GTGATAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1125626                              16522 7 +     16959 GTGGTGG
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38372 7 +     72255 GTGGTGG
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            11013 7 +     11432 GTGGTGG
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16387 7 -     16755 GTGGTGG
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14958 7 -     15289 GTGGTGG
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386954 7 - 209938924 GTGGTGG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7818 7 +     22212 GTGGTGG
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16316 7 +     39756 GTGGTGG
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Sapajus_apella.ctg103                                     234504 7 +   5703754 GTGGTAA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4094 7 +     21866 GTGGTAA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         21012 7 +     27374 GTGATAA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24527 7 +     58920 GTGATAA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11024 7 -     45317 GTGATAA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18681 7 -     42441 GTGATAA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21363 7 -     29113 GTGATAA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24435 7 -     48123 GTGATAA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386607 7 +   1523678 GTGGTAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                           348917 7 - 186847797 gtggtaa
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16576 7 +     26378 GTGATAA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29257 7 -     78344 GTGATAA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15897 7 +     25722 GTGATAA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24120 7 -     62838 GTGATAA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24239 7 +     46913 GTGATAA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5047 7 -     28527 GTGATAA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26059 7 -     64340 GTGATAA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24096 7 -     63452 GTGATAA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5538 7 +     22490 GTGATAA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3158 7 +      4141 GTGATAA
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5964 7 -     13050 GTGATAA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251201 7 -   6242583 GTGATAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56933 7 +     59866 GTGATAA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
e Choloepus_hoffmanni.KN194906.1                            601080 7 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9504 7 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                    9704 7 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2087761 7 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563             2698 7 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178                164 7 +      5315 I
e Tupaia_tana.TupTan_flattened_line_394                       2958 222 -     70247 I
e Tupaia_chinensis.KB320699.1                              1825563 239 -   4065304 I
e Zalophus_californianus.ZalCal_flattened_line_17732         24544 7 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                100679 7 -    112863 I
e Ursus_maritimus.KK499267.1                                177293 0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              2069 7 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_59017          4206 7 -     10349 I
e Otocyon_megalotis.JAEUCK010005147.1                        34999 7 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1447325 7 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                193933 7 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11464552 7 -  31847680 I
e Mustela_putorius.JH418006.1                             14343111 7 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         4156 7 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             14067 7 -     74585 I
e Lycaon_pictus.CM007581.1                                41610317 7 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        809140 7 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24906055 7 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45102732 7 -  63665305 I
e Canis_lupus_familiaris.chr16                            41611162 7 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          218037 7 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     4676 7 -     23171 I
e CanFam4.chr16                                           42501046 7 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_859459                  224 7 -       293 I
e Ailurus_fulgens.LNAC01001112.1                            211516 7 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20410610 0 +  29979442 C
e Ziphius_cavirostris.ZipCav_flattened_line_2660542            268 7 +       358 I
e Xerus_inauris.XerIna_scaffold_2302                        162161 110 -    224448 I
e Vicugna_pacos.KN270157.1                                   74697 7 +   5488506 I
e Varecia_variegata.k141_289850                              20070 2 -    147434 I
e Varecia_rubra.k141_787544                                  21162 2 -     30710 I
e Uropsilus_gracilis.UroGra_scaffold_7153                   103421 7 -    105689 I
e Tursiops_truncatus.MRVK01000835.1                       17359613 7 -  33153633 I
e Trichechus_manatus.JH594705.1                            6478664 7 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    475311 7 -    610378 I
e Tarsius_wallacei.k141_226975                                3061 0 +     20590 C
e Tarsius_lariang.k141_1780720                                2977 0 +      6850 C
e Tapirus_terrestris.TapTer_scaffold_755                    101217 7 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      187262 7 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_67439                24269 7 -     25844 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639482 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             120753 7 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1855187 217 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1854190 7 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    112003 7 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6060 7 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70480 7 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2908547 7 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51454 7 +     55069 I
e Puma_concolor.QAVW01001104.1                            18095085 7 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3533009 7 -   4952924 I
e Pteropus_alecto.KB030862.1                               5836433 7 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            47524 7 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          4329 2 +     35169 I
e Propithecus_tattersalli.k141_1127767                       90707 2 -     98465 I
e Propithecus_perrieri.k141_1496898                          30416 2 +     46564 I
e Propithecus_edwardsi.k141_635656                            4091 2 -     30655 I
e Propithecus_diadema.k141_153680                              356 2 -     11706 I
e Propithecus_coronatus.k141_149744                          79201 2 -     79582 I
e Propithecus_coquerelli.NW_012148875.1                    1562114 2 -   2598838 I
e Prolemur_simus.MPIZ01000396.1                            1979532 2 +   4620579 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8007 7 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           2816 7 -      8168 I
e Pipistrellus_pipistrellus.PipPip_scaffold_20257            45649 7 +     46691 I
e Phocoena_phocoena.PhoPho_flattened_line_46867              10737 5 -     15039 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11123 7 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1613920 7 +   2937107 I
e Panthera_tigris.KE722367.1                               3968262 7 +   8748460 I
e Panthera_pardus.KV860321.1                              18457533 7 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   20207 7 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       2993 7 +     17875 I
e Ovis_aries.CM001607.2                                   26402474 7 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8094874 7 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12485 7 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         434497 7 -    630418 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   122658 7 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1225609 5 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              109314 7 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        1767 7 +      3929 I
e Myotis_lucifugus.GL432175.1                                18452 7 -     39439 I
e Myotis_davidii.KB100139.1                                4378209 7 +   6019432 I
e Myotis_brandtii.KE162005.1                               9787822 7 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          33370 7 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   14157 7 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22506 7 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 174445 7 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351440 5 +    437263 I
e Mirza_zaza.k141_766280                                     48494 2 -     62432 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39533 7 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6360632 7 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                180273 7 +    200668 I
e Microcebus_murinus.CM007674.1                           74980632 2 +  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79544 7 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       146038 7 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7488977 96 +  40650429 I
e Manis_pentadactyla.KN006162.1                             216996 7 +    317179 I
e Manis_javanica.JSZB01003497.1                             669702 7 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                218961 7 -    270270 I
e Loxodonta_africana.GL010049.1                           39076016 7 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333002 7 +    662738 I
e Lepilemur_septentrionalis.k141_360456                       5032 2 +     16388 I
e Lepilemur_ruficaudatus.k141_330196                          5035 2 +     24756 I
e Lepilemur_dorsalis.k141_387009                              5027 2 +     31569 I
e Lepilemur_ankaranensis.k141_567626                          5028 2 +     29618 I
e Lemur_catta.scaffold_24                                 14756374 2 +  30322482 I
e Lasiurus_borealis.LasBor_scaffold_16567                    58971 7 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 63979 7 -     97402 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1479 7 -     16823 I
e Indri_indri.k141_2435083                                     929 2 +      1070 I
e Ictidomys_tridecemlineatus.JH393364.1                     374877 103 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  64556 7 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_23202               45072 7 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1545781 7 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                5943 7 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_99956                10850 7 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7354 7 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                26384 7 -    327341 I
e Hapalemur_occidentalis.k141_578367                         13725 2 -     53142 I
e Hapalemur_meridionalis.k141_258450                          6729 2 -     42923 I
e Hapalemur_griseus.k141_763500                              57852 2 -     66874 I
e Hapalemur_gilberti.k141_646465                             32984 2 +     49394 I
e Hapalemur_alaotrensis.k141_330369                          11582 2 -     40692 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      89602 7 -     95226 I
e Galeopterus_variegatus.GalVar_scaffold_74466               14826 14 +     18121 I
e Felis_nigripes.FelNig_flattened_line_31944                 23619 7 -     30238 I
e Felis_catus_fca126.CM031415.1                          185112271 7 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              55892 2 -    111500 I
e Eulemur_rufus.k141_514691                                  39491 2 -     52037 I
e Eulemur_rubriventer.k141_1423786                            1768 2 +     30972 I
e Eulemur_mongoz.k141_232305                                 45041 2 -     97555 I
e Eulemur_macaco.k141_1562045                                20848 2 -     75513 I
e Eulemur_fulvus.k141_636316                                 50218 2 -     65740 I
e Eulemur_flavifrons.k141_433119                             39893 2 +     68309 I
e Eulemur_coronatus.k141_384460                              83321 2 +    112731 I
e Eulemur_collaris.k141_601111                               39361 2 -     70999 I
e Eulemur_albifrons.k141_51491                               11649 2 -     24895 I
e Eubalaena_japonica.EubJap_flattened_line_118172             3459 7 +      7672 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           63243 7 -    133382 I
e Equus_przewalskii.KK951119.1                              408204 7 -    498745 I
e Equus_caballus.CM000403.2                               21371418 7 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3037484 7 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12573461 7 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       237927 7 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               1890 7 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  134821 7 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  660301 7 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18623697 5 -  35494412 I
e Daubentonia_madagascariensis.ctg71                        288688 2 +  12879189 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_24933             45470 7 -     47254 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_101005          8533 7 +     10921 I
e Condylura_cristata.JH655891.1                           35802920 7 +  53390261 I
e Cheirogaleus_medius.k141_759766                              865 2 -     15404 I
e Cheirogaleus_major.k141_666340                             26671 2 -     33796 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14845 7 +     27315 I
e Cephalopachus_bancanus.k141_1275952                        13645 0 -     50533 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75009 8 -    217609 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Carlito_syrichta.NW_007259797.1                           265374 0 +    496798 C
e Capra_hircus.CM004588.1                                 26589523 7 +  44709034 I
e Capra_aegagrus.CM003241.1                               27407250 7 -  46296322 I
e Camelus_ferus.KB017975.1                                 1207304 7 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4663644 7 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7629358 7 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1528180 7 -   4408762 I
e Bos_taurus.CM000203.6                                   27543158 7 -  45695690 I
e Bos_mutus.JH880303.1                                      753019 7 +   1948126 I
e Bos_indicus.CM003047.1                                  20354451 7 +  48749331 I
e Bison_bison.KN261452.1                                     20064 7 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     84533 7 +    124022 I
e Balaenoptera_bonaerensis.DF507193.1                         2572 7 -      4711 I
e Balaenoptera_acutorostrata.KI537508.1                    7955364 7 -  23207421 I
e Avahi_peyrierasi.k141_1823318                               2251 2 -     19611 I
e Avahi_laniger.k141_2756659                                  2249 2 +     11645 I
e Aplodontia_rufa.AprRuf_scaffold_46868                       5775 5826 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             48635 7 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      172266 7 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583539 7 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           808830 7 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        285 15 +     36723 TTTTTTA-AA---TGAC--AG
s Acinonyx_jubatus.LLWD01001279.1                           808837 17 +   1699592 tttttta-aataaaag--c-a
i Acinonyx_jubatus.LLWD01001279.1                        I 7 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410610 13 +  29979442 ----TTA-AATgataa--c-t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            211523 17 +    347723 CCTTTTT-AATGACaa--c-t
i Ailurus_fulgens.LNAC01001112.1                         I 7 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43596 15 +     53615 TTTTTTG-AA---TGAC--AG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39411 15 +     44087 TTTTTTA-AA---TGAC--AG
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         12840 15 -     21945 TTTTTTA-AA---TGAC--AG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14518 15 +     32033 TTTTTTA-AA---TGAC--AG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             68334 15 -     84148 TTTTTTA-AA---TGAC--AG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40557 15 -     78289 TTTTTTA-AA---TGAC--AG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40005 15 +     55831 TTTTTTA-AA---TGAC--AG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38446 15 -     64179 TTTTTTA-AA---TGAC--AG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20089 15 -     24835 TTTTTTA-AA---TGAC--AG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37072 15 +     45454 TTTTTTA-AA---TGAC--AG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42771 15 +     70886 TTTTTTA-AA---TGAC--AG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4898 15 +     30854 TTTTTTA-AA---TGAC--AG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29037 15 +     42133 TTTTTTA-AA---TGAC--AG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583546 15 +   2318259 CCTGTCA-AATGATAG-----
i Ammotragus_lervia.NIVO01071767.1                       I 7 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      172273 15 -    412891 CCTTTTA-AATGCTAA-----
i Anoura_caudifer.AnoCau_scaffold_1412                   I 7 I 1
s Antilocapra_americana.AntAmePen_scaffold_21030             48642 15 -     68529 CCTTTTA-AATGATAG-----
i Antilocapra_americana.AntAmePen_scaffold_21030         I 7 I 1
s Aotus_azarae.k141_118258                                   46842 15 -     65372 TTCTTTA-AA---TGAC--AG
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40590 15 +     43593 TTCTTTA-AA---TGAC--AG
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668600 15 +   5030052 TTCTTTA-AA---TGAC--AG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20242 15 -     23494 TTCTTTA-AA---TGAC--AG
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5378 15 +      8415 TTCTTTA-AA---TGAC--AG
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11601 15 -     32367 CTTTCCT-AA---AAA-T-AA
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 5826 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_859459                  231 15 -       293 CCTTTTA-AATGATAA-----
i Artibeus_jamaicensis.ArtJam_scaffold_859459            I 7 I 1
s Ateles_geoffroyi_b.tarseq_1536                               270833 14 +  21539123 TT-TTTA-AA---TGAC--AG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7004 14 +     48076 TT-TTTA-AA---TGAC--AG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2138 14 -     28759 TT-TTTA-AA---TGAC--AG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29690 14 +     44353 TT-TTTA-AA---TGAC--AG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45065 14 -     71267 TT-TTTA-AA---TGAC--AG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19121 14 -     33135 TT-TTTA-AA---TGAC--AG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2251  2 +     11645 -------------------AG
i Avahi_laniger.k141_2756659                             I 2 C 0
s Avahi_peyrierasi.k141_1823318                               2253  2 -     19611 -------------------AG
i Avahi_peyrierasi.k141_1823318                          I 2 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955371 15 -  23207421 cctttca-aatgatag-----
i Balaenoptera_acutorostrata.KI537508.1                  I 7 I 1
s Balaenoptera_bonaerensis.DF507193.1                         2579 15 -      4711 cctttca-aatgatag-----
i Balaenoptera_bonaerensis.DF507193.1                    I 7 I 1
s Beatragus_hunteri.BeaHun_scaffold_7278                     84540 15 +    124022 CCTTTCA-AATGATAG-----
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 7 I 1
s Bison_bison.KN261452.1                                     20071 15 +    288883 CCTCGTA-AGTGATAG-----
i Bison_bison.KN261452.1                                 I 7 I 1
s Bos_indicus.CM003047.1                                  20354458 15 +  48749331 CCTCGTA-AGTGATAG-----
i Bos_indicus.CM003047.1                                 I 7 I 1
s Bos_mutus.JH880303.1                                      753026 15 +   1948126 CCTCGTA-AGTGATAG-----
i Bos_mutus.JH880303.1                                   I 7 I 1
s Bos_taurus.CM000203.6                                   27543165 15 -  45695690 CCTCGTA-AGTGATAG-----
i Bos_taurus.CM000203.6                                  I 7 I 1
s Bubalus_bubalis.KI419123.1                               1528187 15 -   4408762 CCTTTTA-AGTGATAG-----
i Bubalus_bubalis.KI419123.1                             I 7 I 1
s Cacajao_ayresi.k141_96119                                   4024 15 +     28062 TTTTTTA-AA---CGAC--AG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39319 15 -     91139 TTTTTTA-AA---CGAC--AG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16844 15 +     95584 TTTTTTA-AA---CGAC--AG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16757 15 +    119600 TTTTTTA-AA---CGAC--AG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5949 15 -     13885 TTCTTTA-AA---TGAC--AG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14635 15 +     17162 TTCTTTA-AG---TGAC--AG
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449591 15 + 189096842 TTCTTTA-AG---TGAC--AG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15884 15 -     18408 TTCTTTA-AG---TGAC--AG
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629365 18 +  17673402 ccttttaaaatgataa--c-t
i Camelus_bactrianus.KN276810.1                          I 7 C 0
s Camelus_dromedarius.KN272107.1                           4663651 18 +   7040546 ccttttaaaatgataa--c-t
i Camelus_dromedarius.KN272107.1                         I 7 C 0
s Camelus_ferus.KB017975.1                                 1207311 18 +   1652518 ccttttaaaatgataa--c-t
i Camelus_ferus.KB017975.1                               I 7 C 0
s CanFam4.chr16                                           42501053 17 +  60362399 CTTTTTA-AATGATAA--C-T
i CanFam4.chr16                                          I 7 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4683 17 -     23171 CTTTTTA-AATGATAA--C-T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 7 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218044 17 +   9314153 cttttta-aatgataa--c-t
i Canis_lupus_dingo.QKWQ01000480.1                       I 7 C 0
s Canis_lupus_familiaris.chr16                            41611169 17 +  59632846 cttttta-aatgataa--c-t
i Canis_lupus_familiaris.chr16                           I 7 C 0
s Canis_lupus_orion.HG994398.1                            45102739 17 -  63665305 cttttta-aatgataa--c-t
i Canis_lupus_orion.HG994398.1                           I 7 C 0
s Capra_aegagrus.CM003241.1                               27407257 15 -  46296322 CCTGTCA-AATGATAG-----
i Capra_aegagrus.CM003241.1                              I 7 I 1
s Capra_hircus.CM004588.1                                 26589530 15 +  44709034 CCTGTCA-AATGATAG-----
i Capra_hircus.CM004588.1                                I 7 I 1
s Carlito_syrichta.NW_007259797.1                           265374 15 +    496798 ctttcta-aa---tgac--ag
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                171 15 +      5315 CCTTTTA-AATGCTAA-----
i Carollia_perspicillata.CarPer_scaffold_170178          I 7 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     75017 15 -    217609 CCTTTTA-AATGATAG-----
i Catagonus_wagneri.CatWag_scaffold_2839                 I 8 I 1
s Cebuella_niveiventris.k141_592277                           1169 15 -     12580 TTCTTTA-AG---TGAC--AG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39055 15 +     53515 TTCTTTA-AA---TGAC--AG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367287 15 -  26074798 TTCTTTA-AA---TGAC--AG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4176 15 -     34880 TTCTTTA-AA---TGAC--AG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63271 15 -     89041 TTCTTTA-AA---TGAC--AG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13645 15 -     50533 TTTTCTA-AG---TGAC--AG
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488019 14 -  27778364 CCTTCTA-AA---Taa--c-t
i Ceratotherium_simum.JH767749.1                         I 7 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14852 14 +     27315 CCTTCTA-AA---TAA--C-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 7 C 0
s Cercocebus_atys.KQ010504.1                                136756 15 -   4669795 tttttta-aa---tgtc--ag
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40497 15 +     47900 TTTTTTA-AA---TGTC--AG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40329 15 -     44860 TTTTTTA-AA---TGTC--AG
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40311 15 -    148725 TTTTTTA-AA---TGTC--AG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23297 15 -     40656 TTTTTTA-AA---TGAC--AG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3305 15 +     20796 TTTTTTA-AA---TGAC--AG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7560 15 -     17524 TTTTTTA-AA---TGAC--AG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23252 15 -     34525 TTTTTTA-AA---TGAC--AG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7972 15 -     25376 TTTTTTA-AA---TGAC--AG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360449 15 -  39242232 TTTTTTA-AA---TGAC--AG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266277 15 +  21565898 TTTTTTA-AA---TGAC--AG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27723 15 -     45857 TTTTTTA-AA---TGAC--AG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23514 15 -     32606 TTTTTTA-AA---TGAC--AG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27163 15 +     27662 TTTTTTA-AA---TGAC--AG
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21213 15 +     70610 TTTTTTA-AA---TGAC--AG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18078 15 +     36323 TTTTTTA-AA---TGAC--AG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             2705 14 -     19938 CCTTTTA-AA---TTA--A-A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 7 C 0
s Cheirogaleus_major.k141_666340                             26673  2 -     33796 -------------------AG
i Cheirogaleus_major.k141_666340                         I 2 C 0
s Cheirogaleus_medius.k141_759766                              867  2 -     15404 -------------------AG
i Cheirogaleus_medius.k141_759766                        I 2 C 0
s Cheracebus_lucifer.k141_2312002                             5121 15 -     32913 TTTTTTA-AA---TGAC--AG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15534 15 -     40346 TTTTTTA-AA---TGAC--AG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15798 15 +    216457 TTTTTTA-AA---CGAC--AG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15577 15 +     39636 TTTTTTA-AA---TGAC--AG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16626 15 -     17061 TTCTTTA-AA---TGAC--AG
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38663 15 -    112038 TTTTTTA-AA---CGAC--AG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4235 15 +     34062 TTTTTTA-AA---CGAC--AG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338976 15 +  18827391 TTTTTTA-AA---TGAC--AG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5580 15 -     44032 TTTTTTA-AA---TGAC--AG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300302 15 - 135778131 tttttta-aa---tgac--ag
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                  9511 15 +     15858 CCTTTTT-AA---TTA-TA-A
i Choloepus_didactylus.ChoDid_scaffold_70559             I 7 C 0
s Choloepus_hoffmanni.KN194906.1                            601087 15 -    839153 CCTTTTT-AA---TTA-TA-A
i Choloepus_hoffmanni.KN194906.1                         I 7 C 0
s Colobus_angolensis.KN981557.1                             404833 15 -   2368649 tttttta-aa---tgac--ag
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374023 15 - 200372422 TTTTTTA-AA---TGAC--AG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4717 15 -      6605 TTTTTTA-AA---TGAC--AG
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802927 14 +  53390261 cttttaa-aa---taa--c-t
i Condylura_cristata.JH655891.1                          I 7 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8540 17 +     10921 CCTTTTA-AATGGTAA--C-T
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 7 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45477 17 -     47254 CCTTTTA-AATGATAA--C-A
i Cryptoprocta_ferox.CryFer_flattened_line_24933         I 7 C 0
s Dasypus_novemcinctus.JH564415.1                          2087768 14 -   2246927 cctttta-aa---tta--a-a
i Dasypus_novemcinctus.JH564415.1                        I 7 C 0
s Daubentonia_madagascariensis.ctg71                        288690  2 +  12879189 -------------------AG
i Daubentonia_madagascariensis.ctg71                     I 2 C 0
s Delphinapterus_leucas.KZ290073.1                        18623702 12 -  35494412 ---TTCA-AATGATAG-----
i Delphinapterus_leucas.KZ290073.1                       I 5 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660308 14 -   1390856 CCTTCTA-AA---TAa--c-t
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 7 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134828 14 -    198055 CCTTCTA-AA---TAA--C-T
i Diceros_bicornis.DicBicMic_scaffold_5955               I 7 C 0
s Eidolon_helvum.AWHC01266696.1                               1897 17 +     19438 Cctttta-aatgataa--c-t
i Eidolon_helvum.AWHC01266696.1                          I 7 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237934 14 -    607251 CCTTTTA-AATGATA------
i Elaphurus_davidianus.JRFZ01104969.1                    I 7 I 1
s Enhydra_lutris.KZ291758.1                               24906062 17 +  41312741 CCTTTTA-AATGACaa--c-t
i Enhydra_lutris.KZ291758.1                              I 7 C 0
s Eptesicus_fuscus.JH977646.1                             12573468 17 +  14770903 CCTTTTA-GGAGATAA--C-C
i Eptesicus_fuscus.JH977646.1                            I 7 C 0
s Equus_asinus.JREZ01000139.1                              3037491 14 -   4378816 CCTTTTA-AA---TAA--C-G
i Equus_asinus.JREZ01000139.1                            I 7 C 0
s Equus_caballus.CM000403.2                               21371425 14 +  39960074 cctttta-aa---taa--c-g
i Equus_caballus.CM000403.2                              I 7 C 0
s Equus_przewalskii.KK951119.1                              408211 14 -    498745 cctttta-aa---taa--c-g
i Equus_przewalskii.KK951119.1                           I 7 C 0
s Erythrocebus_patas.Contig38                               258532 15 +  21539334 TTTTTTA-AA---TGAC--AG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               11651  2 -     24895 -------------------ag
i Eulemur_albifrons.k141_51491                           I 2 C 0
s Eulemur_collaris.k141_601111                               39363  2 -     70999 -------------------ag
i Eulemur_collaris.k141_601111                           I 2 C 0
s Eulemur_coronatus.k141_384460                              83323  2 +    112731 -------------------ag
i Eulemur_coronatus.k141_384460                          I 2 C 0
s Eulemur_flavifrons.k141_433119                             39895  2 +     68309 -------------------tg
i Eulemur_flavifrons.k141_433119                         I 2 C 0
s Eulemur_fulvus.k141_636316                                 50220  2 -     65740 -------------------AG
i Eulemur_fulvus.k141_636316                             I 2 C 0
s Eulemur_macaco.k141_1562045                                20850  2 -     75513 -------------------AG
i Eulemur_macaco.k141_1562045                            I 2 C 0
s Eulemur_mongoz.k141_232305                                 45043  2 -     97555 -------------------AG
i Eulemur_mongoz.k141_232305                             I 2 C 0
s Eulemur_rubriventer.k141_1423786                            1770  2 +     30972 -------------------AG
i Eulemur_rubriventer.k141_1423786                       I 2 C 0
s Eulemur_rufus.k141_514691                                  39493  2 -     52037 -------------------ag
i Eulemur_rufus.k141_514691                              I 2 C 0
s Eulemur_sanfordi.k141_1122526                              55894  2 -    111500 -------------------ag
i Eulemur_sanfordi.k141_1122526                          I 2 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63250 15 -    133382 cctttca-aatgatag-----
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 7 I 1
s Eubalaena_japonica.EubJap_flattened_line_118172             3466 15 +      7672 cctttca-aatgatag-----
i Eubalaena_japonica.EubJap_flattened_line_118172        I 7 I 1
s Felis_catus.CM001381.2                                 186242496 17 - 206538554 tttttta-aataaaag--t-a
i Felis_catus.CM001381.2                                 I 7 C 0
s Felis_catus_fca126.CM031415.1                          185112278 17 - 205367284 tttttta-aataaaag--c-a
i Felis_catus_fca126.CM031415.1                          I 7 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23626 17 -     30238 TTTTTTA-AATAAAAG--C-A
i Felis_nigripes.FelNig_flattened_line_31944             I 7 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14840 15 +     18121 CTTTTTA-AA---TAA-T-AA
i Galeopterus_variegatus.GalVar_scaffold_74466           I 14 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89609 15 -     95226 CCTTTGA-AATGATAG-----
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 7 I 1
s Gorilla_beringei.k141_3358147                                642 15 -      8343 TTTTTTA-AA---TGAC--AG
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250137 15 - 186649187 tttttta-aa---tgac--ag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11584  2 -     40692 -------------------AG
i Hapalemur_alaotrensis.k141_330369                      I 2 C 0
s Hapalemur_gilberti.k141_646465                             32986  2 +     49394 -------------------ag
i Hapalemur_gilberti.k141_646465                         I 2 C 0
s Hapalemur_griseus.k141_763500                              57854  2 -     66874 -------------------ag
i Hapalemur_griseus.k141_763500                          I 2 C 0
s Hapalemur_meridionalis.k141_258450                          6731  2 -     42923 -------------------AG
i Hapalemur_meridionalis.k141_258450                     I 2 C 0
s Hapalemur_occidentalis.k141_578367                         13727  2 -     53142 -------------------AG
i Hapalemur_occidentalis.k141_578367                     I 2 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26391 15 -    327341 CCTTTTA-AATGATAA-----
i Helogale_parvula.HelPar_flattened_line_2585            I 7 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7361 15 +     48891 CCTGTCA-AAAGATAG-----
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 7 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10857 12 +     12639 CCTTTTT-AA---TAA-----
i Heterohyrax_brucei.HetBruBak_scaffold_99956            I 7 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5950 15 -     36432 cctttca-aatgatag-----
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 7 I 1
s Hipposideros_armiger.JXIK01000431.1                      1545788 17 -   1711038 CCTTTTA-AATGAtaa--c-t
i Hipposideros_armiger.JXIK01000431.1                    I 7 I 2
s Hipposideros_galeritus.HipGal_scaffold_23202               45079 17 +     49977 cctttta-agtgataa--c-t
i Hipposideros_galeritus.HipGal_scaffold_23202           I 7 I 2
s Hoolock_leuconedys.ctg274                                    138037 15 -    630532 TTTTTTA-AA---TGAC--AG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  64563 17 +     83186 CCTTTTA-AATGATAA--C-C
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 7 C 0
s Hylobates_agilis.k141_1155965                               1065 15 +     12352 TTTTTTA-AA---TGAC--AG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8248 15 +     55766 TTTTTTA-AA---TGAC--AG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047592 15 + 191637585 TTTTTTA-AA---TGAC--AG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796924 15 +  11177569 TTTTTTA-AA---TGAC--AG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374980 15 +   7955117 ttttttc-aa---taa--taa
i Ictidomys_tridecemlineatus.JH393364.1                  I 103 C 0
s Indri_indri.k141_2435083                                     931  2 +      1070 -------------------AG
i Indri_indri.k141_2435083                               I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1486 15 -     16823 cctttca-aatgattc-----
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 7 I 1
s Kogia_breviceps.KogBre_flattened_line_3970                 63986 15 -     97402 CCTGTCA-AATGATAG-----
i Kogia_breviceps.KogBre_flattened_line_3970             I 7 I 1
s Lagothrix_lagothricha.k141_246028                          39380 14 +    110728 TT-TTTA-AA---TGAC--AG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58978 17 -     65777 CCTTTTA-AATGATAA--C-T
i Lasiurus_borealis.LasBor_scaffold_16567                I 7 C 0
s Lemur_catta.scaffold_24                                 14756376  2 +  30322482 -------------------ag
i Lemur_catta.scaffold_24                                I 2 C 0
s Leontocebus_fuscicollis.k141_3469711                        5037 15 -      5330 TTCTTTA-AA---TGAC--AG
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16475 15 -     16762 TTCTTTA-AA---TGAC--AG
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16773 15 -     17065 TTCTTTA-AA---TGGC--AG
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6298 15 -     11567 TTCTTTA-AA---TGAC--AG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7679 15 -     12945 TTCTTTA-AA---TGAC--AG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5030  2 +     29618 -------------------AG
i Lepilemur_ankaranensis.k141_567626                     I 2 C 0
s Lepilemur_dorsalis.k141_387009                              5029  2 +     31569 -------------------AG
i Lepilemur_dorsalis.k141_387009                         I 2 C 0
s Lepilemur_ruficaudatus.k141_330196                          5037  2 +     24756 -------------------AG
i Lepilemur_ruficaudatus.k141_330196                     I 2 C 0
s Lepilemur_septentrionalis.k141_360456                       5034  2 +     16388 -------------------AG
i Lepilemur_septentrionalis.k141_360456                  I 2 C 0
s Leptonychotes_weddellii.KB714746.1                        809147 15 -   3914936 cctttta-aatgataa-----
i Leptonychotes_weddellii.KB714746.1                     I 7 I 2
s Lipotes_vexillifer.KE559953.1                             333009 15 +    662738 cctttca-aatgatag-----
i Lipotes_vexillifer.KE559953.1                          I 7 I 1
s Lophocebus_aterrimus.ctg367                               328712 15 -   1826925 TTTTTTA-AA---TGTC--AG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39076023 15 +  43346337 ccttttt-aa---tta-ta-a
i Loxodonta_africana.GL010049.1                          I 7 C 0
s Lycaon_pictus.CM007581.1                                41610324 17 +  59628241 cttttta-aatgataa--c-t
i Lycaon_pictus.CM007581.1                               I 7 C 0
s Macaca_arctoides.k141_1757516                              40993 15 -     61512 TTTTTTA-AA---TGTC--AG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368621 15 -  60120075 TTTTTTA-AA---TGTC--AG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20940 15 +     30207 TTTTTTA-AA---TGTC--AG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18043 15 -     24934 TTTTTTA-AA---TGTC--AG
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20827 15 +     30527 TTTTTTA-AA---TGTC--AG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32016 15 -     50087 TTTTTTA-AA---TGTC--AG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41754 15 +     51645 TTTTTTA-AA---TGTC--AG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410328 15 - 187317192 tttttta-aa---tgtc--ag
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395211 15 +  25927173 tttttta-aa---tgtc--ag
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44343 15 -     62418 TTTTTTA-AA---TGTC--AG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21030 15 +     24253 TTTTTTA-AA---TGTC--AG
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40787 15 +     59329 TTTTTTA-AA---TGTC--AG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266619 15 +    668171 TTTTTTA-AA---TGTC--AG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17965 15 +     21031 TTTTTTA-AA---TGTC--AG
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31697 15 +     33478 TTTTTTA-AA---TGTC--AG
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218968 17 -    270270 CCTTTTA-AATTATAA--C-T
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 7 C 0
s Mandrillus_leucophaeus.scaffold280                        318095 15 +  24302211 TTTTTTA-AA---TGTC--AG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352927 15 -    752769 TTTTTTA-AA---TGTC--AG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669709 17 -    737560 Cctttta-aatgataa--c-c
i Manis_javanica.JSZB01003497.1                          I 7 C 0
s Manis_pentadactyla.KN006162.1                             217003 17 +    317179 Cctttta-aatgataa--c-c
i Manis_pentadactyla.KN006162.1                          I 7 C 0
s Marmota_marmota.CZRN01000018.1                           7489073 15 +  40650429 CTTTTTC-AA---TAA-T-AA
i Marmota_marmota.CZRN01000018.1                         I 96 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146045 17 +    207569 CTTTTTA-AATGGTAT--G-T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 7 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14074 17 -     74585 CCTTTTA-AATGATAA--C-T
i Mellivora_capensis.MelCap_flattened_line_19308         I 7 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79551 15 +     93471 cctttca-aatgatag-----
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 7 I 1
s Mico_argentatus.k141_582562                                 6057 15 +     17804 TTCTTTA-AG---TGAC--AG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6830 15 -     12984 TTCTTTA-AG---TGAC--AG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14792 15 -     26561 TTCTTTA-AG---TGAC--AG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980634  2 +  93316391 -------------------Ag
i Microcebus_murinus.CM007674.1                          I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180280 15 +    200668 CCTTTTA-AACGATAA-----
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 7 I 1
s Miniopterus_natalensis.LDJU01000034.1                    6360639 17 -   8254450 CCTCTTA-AATGAtaa--c-t
i Miniopterus_natalensis.LDJU01000034.1                  I 7 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39540 17 -     48117 CCTCTTA-AATGATAA--C-T
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 7 C 0
s Miopithecus_ogouensis.k141_1534655                         18006 15 -     27822 TTTTTTA-AA---TGAC--AG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4163 17 +     27589 cctttta-aatgataa--c-t
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 7 C 0
s Mirza_zaza.k141_766280                                     48496  2 -     62432 -------------------AG
i Mirza_zaza.k141_766280                                 I 2 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351445 12 +    437263 ---TTCA-AATGATAG-----
i Monodon_monoceros.MonMon_M_scaffold_103                I 5 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174452 13 +    366855 CCTTTTA-AGTGAT-------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 7 I 1
s Moschus_moschiferus.MosMos_scaffold_13123                  22513 15 -     82753 CCTTTTA-AATGATAG-----
i Moschus_moschiferus.MosMos_scaffold_13123              I 7 I 1
s Mungos_mungo.MunMun_flattened_line_18455                   14164 17 -     63510 CCTTTTA-AATGATAA--C-A
i Mungos_mungo.MunMun_flattened_line_18455               I 7 C 0
s Murina_feae.MurFea_scaffold_17764                          33377 17 +     47283 CCTTTTA-AATGATAA--C-T
i Murina_feae.MurFea_scaffold_17764                      I 7 C 0
s Mustela_putorius.JH418006.1                             14343118 17 +  14710649 CCTTTTA-AAtgacaa--t-t
i Mustela_putorius.JH418006.1                            I 7 C 0
s Myotis_brandtii.KE162005.1                               9787829 17 +  10118263 Cctttta-aatgatat--c-t
i Myotis_brandtii.KE162005.1                             I 7 C 0
s Myotis_davidii.KB100139.1                                4378216 17 +   6019432 CCTTTTA-AATGAtaa--c-t
i Myotis_davidii.KB100139.1                              I 7 C 0
s Myotis_lucifugus.GL432175.1                                18459 17 -     39439 CCTTTTA-AATgataa--c-t
i Myotis_lucifugus.GL432175.1                            I 7 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1774 17 +      3929 CCTTTTA-AATGATAG--C-T
i Myotis_myotis.MyoMyo_scaffold_185951                   I 7 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              109321 13 +    130748 CCTTT---AC---TTA-TA-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 7 I 349
s Nasalis_larvatus.k141_1350636                              24371 15 +     34575 TTTTTTA-AA---TGAC--AG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464559 17 -  31847680 cctttta-aatgataa--c-t
i Neomonachus_schauinslandi.NINY01007730.1               I 7 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225614 12 -   7148211 ---TTCA-AATGATAG-----
i Neophocaena_asiaeorientalis.KZ687982.1                 I 5 I 1
s Noctilio_leporinus.NocLep_scaffold_7894                   122665 15 -    149072 CCTTTTA-AATGATAA-----
i Noctilio_leporinus.NocLep_scaffold_7894                I 7 I 1
s Nomascus_annamensis.k141_1771965                           49322 15 -    132029 TTTTTTA-AA---TGAC--AG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5418 15 -     16345 TTTTTTA-AA---TGAC--AG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11301 15 +     22201 TTTTTTA-AA---TGAC--AG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409638 15 -  22158432 TTTTTTA-AA---TGAC--AG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21701 15 -     54323 TTTTTTA-AA---TGAC--AG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193940 17 +   9404916 cttttta-aatgataa--c-t
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 7 C 0
s Odobenus_rosmarus.KB229312.1                             1447332 17 +   2017862 CCTTTTA-AATgataa--c-t
i Odobenus_rosmarus.KB229312.1                           I 7 C 0
s Odocoileus_virginianus.KZ100018.1                         434504 15 -    630418 CCTTTTA-AATGATAG-----
i Odocoileus_virginianus.KZ100018.1                      I 7 I 1
s Okapia_johnstoni.LVCL01S0005463.1                          12492 15 +    150152 cctttta-aatgatag-----
i Okapia_johnstoni.LVCL01S0005463.1                      I 7 I 1
s Orcinus_orca.KB316932.1                                  8094881 15 +  10937097 CCTTTCA-GATGATAG-----
i Orcinus_orca.KB316932.1                                I 7 I 1
s Otocyon_megalotis.JAEUCK010005147.1                        35006 17 +    559221 cttttta-aatgataa--c-t
i Otocyon_megalotis.JAEUCK010005147.1                    I 7 C 0
s Ovis_aries.CM001607.2                                   26402481 15 -  44047080 CCTGTCA-AATGATAG-----
i Ovis_aries.CM001607.2                                  I 7 I 1
s Ovis_canadensis.OviCan_scaffold_67953                       3000 15 +     17875 CCTGTCA-AATGATAG-----
i Ovis_canadensis.OviCan_scaffold_67953                  I 7 I 1
s Pan_troglodytes.CM009242.2                               1467525 15 - 189151597 tttttta-aa---tgac--ag
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20214 17 -    230217 TTTTTTA-AATGAAAG--C-A
i Panthera_onca.PanOnc_flattened_line_3271               I 7 C 0
s Panthera_pardus.KV860321.1                              18457540 17 -  18783137 tttttta-aataaaag--c-a
i Panthera_pardus.KV860321.1                             I 7 C 0
s Panthera_tigris.KE722367.1                               3968269 17 +   8748460 tttttta-aataaaag--c-a
i Panthera_tigris.KE722367.1                             I 7 C 0
s Pantholops_hodgsonii.KE114653.1                          1613927 15 +   2937107 CCTGTCA-AATGATAG-----
i Pantholops_hodgsonii.KE114653.1                        I 7 I 1
s Papio_anubis.CM001495.2                                   238939 15 - 183742232 tttttta-aa---tgtc--ag
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5406 15 +     21308 TTTTTTA-AA---TGTC--AG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286443 15 -  20919399 TTTTTTA-AA---TGTC--AG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18059 15 -     27687 TTTTTTA-AA---TGTC--AG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11195 15 +     16796 TTTTTTA-AA---TGTC--AG
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18005 15 -     23640 TTTTTTA-AA---TGTC--AG
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11130 17 +     78924 CCTTTTA-AATAATAA--C-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 7 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10742 12 -     15039 ---TTCA-AATGATAG-----
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 5 I 1
s Piliocolobus_badius.k141_2495623                            4825 15 +      7560 TTTTTTA-AA---TGAC--AG
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60532 15 -     63152 TTTTTTA-AA---TGAC--AG
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43131 15 +     45295 TTTTTTA-AA---TGAC--AG
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     810 15 +      5735 tttttta-aa---tgac--ag
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45656 17 +     46691 CCTTTTA-AATTATAA--C-T
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        I 7 C 0
s Pithecia_albicans.k141_1239476                             61013 15 +    207309 TTTTTTA-AA---CGAC--AG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2133 15 -     25401 TTTTTTA-AA---CGAC--AG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27848 15 +     58159 TTTTTTA-AA---CGAC--AG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28124 15 +     63561 TTTTTTA-AA---CGAC--AG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27887 15 +     51148 TTTTTTA-AA---CGAC--AG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552880 15 -   4542175 TTTTTTA-AA---CGAC--AG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27871 15 +     51125 TTTTTTA-AA---CGAC--AG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2823 15 -      8168 cctttca-aatgatag-----
i Platanista_gangetica.PlaMin_flattened_line_167872      I 7 I 1
s Plecturocebus_bernhardi.k141_2549090                        4303 15 +     39866 TTTTTTA-AA---CGAC--AG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38791 15 -     87950 TTTTTTA-AA---CGAC--AG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39184 15 -     88961 TTTTTTA-AA---CGAC--AG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3884 15 -     39403 TTTTTTA-AA---CGAC--AG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38837 15 +     87928 TTTTTTA-AA---CGAC--AG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3881 15 -     60166 TTTTTTA-AA---CGAC--AG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10817 15 -     67232 TTTTTTA-AA---CGAC--AG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38733 15 -     90634 TTTTTTA-AA---CGAC--AG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40201 15 +     89403 TTTTTTA-AA---CGAC--AG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173142 15 - 189387572 tttttta-aa---tgac--ag
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188140 15 -   9816681 TTTTTTA-AA---TGAC--AG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23311 15 +     69807 TTTTTTA-AA---TGAC--AG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40506 15 -     80239 TTTTTTA-AA---TGAC--AG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8014 15 +     14086 CCTTTTT-AA---TAA-TA-C
i Procavia_capensis.ProCapCap_scaffold_121686            I 7 C 0
s Prolemur_simus.MPIZ01000396.1                            1979534  2 +   4620579 -------------------Ag
i Prolemur_simus.MPIZ01000396.1                          I 2 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562116  2 -   2598838 -------------------Ag
i Propithecus_coquerelli.NW_012148875.1                  I 2 C 0
s Propithecus_coronatus.k141_149744                          79203  2 -     79582 -------------------AG
i Propithecus_coronatus.k141_149744                      I 2 C 0
s Propithecus_diadema.k141_153680                              358  2 -     11706 -------------------AG
i Propithecus_diadema.k141_153680                        I 2 C 0
s Propithecus_edwardsi.k141_635656                            4093  2 -     30655 -------------------AG
i Propithecus_edwardsi.k141_635656                       I 2 C 0
s Propithecus_perrieri.k141_1496898                          30418  2 +     46564 -------------------AG
i Propithecus_perrieri.k141_1496898                      I 2 C 0
s Propithecus_tattersalli.k141_1127767                       90709  2 -     98465 -------------------ag
i Propithecus_tattersalli.k141_1127767                   I 2 C 0
s Propithecus_verreauxi.k141_1047036                          4331  2 +     35169 -------------------ag
i Propithecus_verreauxi.k141_1047036                     I 2 C 0
s Pteronotus_parnellii.KE847780.1                            47531 15 -     66298 CCTGTTA-AATGAtaa-----
i Pteronotus_parnellii.KE847780.1                        I 7 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4213 17 -     10349 CCTTTTA-AATGACAA--C-T
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 7 C 0
s Pteropus_alecto.KB030862.1                               5836440 17 -  28871421 cctttta-aatgataa--c-t
i Pteropus_alecto.KB030862.1                             I 7 C 0
s Pteropus_vampyrus.KN525825.1                             3533016 17 -   4952924 cctttta-aatgataa--c-t
i Pteropus_vampyrus.KN525825.1                           I 7 C 0
s Puma_concolor.QAVW01001104.1                            18095092 17 +  38429054 tttttta-aataaaag--c-a
i Puma_concolor.QAVW01001104.1                           I 7 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51461 15 +     55069 CCTTTTA-AATGATAG-----
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 7 I 1
s Rhinolophus_sinicus.LVEH01000134.1                       2908554 17 +   3329780 cctttta-aataataa--c-t
i Rhinolophus_sinicus.LVEH01000134.1                     I 7 C 0
s Rhinopithecus_bieti.k119_221883                            24529 15 +     27361 TTTTTTA-AA---TGAC--AG
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117888 15 + 195417433 tttttta-aa---tgac--ag
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232137 15 -   7961872 TTTTTTA-AA---TGAC--AG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70487 17 -    116970 CCTTTTA-AATGATAA--C-T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 7 C 0
s Saguinus_bicolor.k141_1125626                              16529 15 +     16959 TTCTTTA-AA---TGAC--AG
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38379 15 +     72255 TTCTTTA-AA---TGAC--AG
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            11020 15 +     11432 TTCTTTA-AA---TGAC--AG
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16394 15 -     16755 TTCTTTA-AA---TGAC--AG
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14965 15 -     15289 TTCTTTA-AA---TGAC--AG
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386961 15 - 209938924 TTCTTTA-AA---TGAC--AG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7825 15 +     22212 TTCTTTA-AA---TGAC--AG
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16323 15 +     39756 TTCTTTA-AA---TGAC--AG
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6067 15 +     16473 CCTTTCA-AATGATAG-----
i Saiga_tatarica.SaiTat_scaffold_39512                   I 7 I 1
s Sapajus_apella.ctg103                                     234511 15 +   5703754 TTCTTTA-AA---TGAC--AG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4101 15 +     21866 TTCTTTA-AA---TGAC--AG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112010 14 +    313613 CTTTAAA-AA---TAA--C-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 7 C 0
s Semnopithecus_entellus.k141_158471                         21019 15 +     27374 TTTTTTA-AA---TGAC--AG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24534 15 +     58920 TTTTTTA-AA---TGAC--AG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11031 15 -     45317 TTTTTTA-AA---TGAC--AG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18688 15 -     42441 TTTTTTA-AA---TGAC--AG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21370 15 -     29113 TTTTTTA-AA---TGAC--AG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24442 15 -     48123 TTTTTTA-AA---TGAC--AG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854197 14 -   1910179 CCATTTA-AA---TAA-T--A
i Solenodon_paradoxus.SolPar_flattened_line_126          I 7 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              2076 17 -     97271 CCTTCGA-AATGACAA--C-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 7 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120760 15 +    196729 CCTTTTA-AACGATAA-----
i Suricata_suricatta.SurSur_flattened_line_6629          I 7 I 1
s Sus_scrofa.CM000828.4                                    6639482 15 +  69701581 CCTTTTA-AATGATaa-----
i Sus_scrofa.CM000828.4                                  C 0 I 1
s Symphalangus_syndactylus.tarseq_199                       386614 15 +   1523678 TTTTTTA-AA---TGAC--AG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                24276 13 -     25844 ccttt---ag---tta-ta-a
i Tamandua_tetradactyla.TamTet_scaffold_67439            I 7 I 346
s Tapirus_indicus.TapInd_scaffold_7432                      187269 14 +    199430 tgttcta-aa---taa--c-t
i Tapirus_indicus.TapInd_scaffold_7432                   I 7 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101224 14 -    539355 CATTCTA-AA---TAA--C-T
i Tapirus_terrestris.TapTer_scaffold_755                 I 7 C 0
s Tarsius_lariang.k141_1780720                                2977 15 +      6850 CTTTCTA-AA---TGAT--AG
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3061 15 +     20590 CTTTCTA-AA---TGAC--AG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348924 15 - 186847797 tttttta-aa---tgtc--ag
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                    9711 14 -     31044 CCTTTTA-AA---TTA--A-A
i Tolypeutes_matacus.TolMat_scaffold_31955               I 7 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475318 15 -    610378 CCATTTA-AATGATAA-----
i Tonatia_saurophila.TonSau_scaffold_294                 I 7 I 1
s Trachypithecus_auratus.k141_1189070                        16583 15 +     26378 TTTTTTA-AA---TGAC--AG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29264 15 -     78344 TTTTTTA-AA---TGAC--AG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15904 15 +     25722 TTTTTTA-AA---TGAC--AG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24127 15 -     62838 TTTTTTA-AA---TGAC--AG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24246 15 +     46913 TTTTTTA-AA---TGAC--AG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5054 15 -     28527 TTTTTTA-AA---TGAC--AG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26066 15 -     64340 TTTTTTA-AA---TGAC--AG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24103 15 -     63452 TTTTTTA-AA---TGAC--AG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5545 15 +     22490 TTTTTTA-AA---TGAC--AG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3165 15 +      4141 TTTTTTA-AA---TGAC--AG
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5971 15 -     13050 TTTTTTA-AA---TGAC--AG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251208 15 -   6242583 TTTTTTA-AA---TGAC--AG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56940 15 +     59866 TTTTTTA-AA---TGAC--AG
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478671 15 -  10818551 ccttttt-aa---tta-ta-a
i Trichechus_manatus.JH594705.1                          I 7 C 0
s Tupaia_chinensis.KB338335.1                                   23 16 -       332 tctctta-aa---tac-ttat
i Tupaia_chinensis.KB338335.1                            n 239 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3180 16 -     70247 tctcTTA-AA---TAC-TTAT
i Tupaia_tana.TupTan_flattened_line_394                  I 222 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359620 15 -  33153633 cctttca-aatgatag-----
i Tursiops_truncatus.MRVK01000835.1                      I 7 I 1
s Uropsilus_gracilis.UroGra_scaffold_7153                   103428 14 -    105689 ACTTTCA-AA---TAA-T--T
i Uropsilus_gracilis.UroGra_scaffold_7153                I 7 C 0
s Ursus_maritimus.KK499267.1                                177293 13 +   5085361 ----TTA-AATGataa--c-t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  21164  2 -     30710 -------------------ag
i Varecia_rubra.k141_787544                              I 2 C 0
s Varecia_variegata.k141_289850                              20072  2 -    147434 -------------------AG
i Varecia_variegata.k141_289850                          I 2 C 0
s Vicugna_pacos.KN270157.1                                   74704 17 +   5488506 cctttta-aatgataa--c-t
i Vicugna_pacos.KN270157.1                               I 7 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100686 17 -    112863 CTTTTTA-AATGATAA--C-T
i Vulpes_lagopus.VulLag_flattened_line_12041             I 7 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162271 15 -    224448 ATTTTTG-AA---TAA-T-AA
i Xerus_inauris.XerIna_scaffold_2302                     I 110 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24551 17 -     86975 CCTTTTA-AATGATAA--C-T
i Zalophus_californianus.ZalCal_flattened_line_17732     I 7 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2660542            275 15 +       358 cctttca-aatgatag-----
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      I 7 I 1
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Spermophilus_dauricus.KZ294078.1                         1855187 217 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        300 6 +     36723 CTT-T-AT
s Acinonyx_jubatus.LLWD01001279.1                           808854 4 +   1699592 --t-t-at
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410623 4 +  29979442 --t-t-at
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            211540 4 +    347723 --t-t-at
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43611 6 +     53615 CTT-T-AT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39426 6 +     44087 CTT-T-AT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         12855 6 -     21945 CTT-T-AT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14533 6 +     32033 CTT-T-AT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             68349 6 -     84148 CTC-T-AT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40572 6 -     78289 CTC-T-AT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40020 6 +     55831 CTC-T-AT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38461 6 -     64179 CTC-T-AT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20104 6 -     24835 CTC-T-AT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37087 6 +     45454 CTC-T-AT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42786 6 +     70886 CTC-T-AT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4913 6 +     30854 CTC-T-AT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29052 6 +     42133 CTC-T-AT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583562 5 +   2318259 --TTT-GT
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172289 5 -    412891 --T-TCAT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48658 5 -     68529 --TTT-AT
i Antilocapra_americana.AntAmePen_scaffold_21030         I 1 C 0
s Aotus_azarae.k141_118258                                   46857 6 -     65372 CTT-T-AT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40605 6 +     43593 CTT-T-AT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668615 6 +   5030052 CTT-T-AT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20257 6 -     23494 CTT-T-AT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5393 6 +      8415 CTT-T-AT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11616 6 -     32367 CTT-T-AT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_859459                  247 5 -       293 --T-TCAT
i Artibeus_jamaicensis.ArtJam_scaffold_859459            I 1 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270847 6 +  21539123 GTT-T-CT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7018 6 +     48076 GTT-T-AT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2152 6 -     28759 GTT-T-AT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29704 6 +     44353 ATT-T-AT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45079 6 -     71267 GTT-T-AT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19135 6 -     33135 GTT-T-AT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2253 6 +     11645 CTT-T-AT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2255 6 -     19611 CTT-T-AT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955387 5 -  23207421 --ttt-at
i Balaenoptera_acutorostrata.KI537508.1                  I 1 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2595 5 -      4711 --ttt-at
i Balaenoptera_bonaerensis.DF507193.1                    I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84556 5 +    124022 --TTT-GT
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 1 C 0
s Bison_bison.KN261452.1                                     20087 5 +    288883 --TTT-GT
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003047.1                                  20354474 5 +  48749331 --TTT-GT
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                      753042 5 +   1948126 --TTT-GT
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000203.6                                   27543181 5 -  45695690 --TTT-GT
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               1528203 5 -   4408762 --TTT-GT
i Bubalus_bubalis.KI419123.1                             I 1 C 0
s Cacajao_ayresi.k141_96119                                   4039 6 +     28062 CTT-T-AT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39334 6 -     91139 CTT-T-AT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16859 6 +     95584 CTT-T-AT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16772 6 +    119600 CTT-T-AT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5964 6 -     13885 CTT-T-AG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14650 6 +     17162 CTT-T-AT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449606 6 + 189096842 CTT-T-AT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15899 6 -     18408 CTT-T-AT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629383 4 +  17673402 --t-t-at
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663669 4 +   7040546 --t-t-at
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207329 4 +   1652518 --t-t-at
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501070 4 +  60362399 --T-T-AT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4700 4 -     23171 --T-T-AT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218061 4 +   9314153 --t-t-at
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41611186 4 +  59632846 --t-t-at
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45102756 4 -  63665305 --t-t-at
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407273 5 -  46296322 --TTT-GT
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 26589546 5 +  44709034 --TTT-GT
i Capra_hircus.CM004588.1                                I 1 C 0
s Carlito_syrichta.NW_007259797.1                           265389 6 +    496798 ctt-t-ag
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                187 5 +      5315 --T-TCAT
i Carollia_perspicillata.CarPer_scaffold_170178          I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75033 5 -    217609 --TTT-AT
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cebuella_niveiventris.k141_592277                           1184 6 -     12580 CTT-T-AT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39070 6 +     53515 CTT-T-AT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367302 6 -  26074798 CTT-T-AA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4191 6 -     34880 CTT-T-AA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63286 6 -     89041 CTT-T-AA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13660 6 -     50533 CTT-T-AG
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488033 4 -  27778364 --t-t-at
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14866 4 +     27315 --T-T-AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136771 6 -   4669795 ctt-t-at
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40512 6 +     47900 CTT-T-AT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40344 6 -     44860 CTT-T-AT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40326 6 -    148725 CTT-T-AT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23312 6 -     40656 TTT-T-AT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3320 6 +     20796 TTT-T-AT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7575 6 -     17524 CTT-T-AT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23267 6 -     34525 CTT-T-GT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7987 6 -     25376 TTT-T-AT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360464 6 -  39242232 TTT-T-AT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266292 6 +  21565898 TTT-T-AT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27738 6 -     45857 TTT-T-AT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23529 6 -     32606 TTT-T-AT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27178 6 +     27662 TTT-T-AT
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21228 6 +     70610 TTT-T-AT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18093 6 +     36323 CTT-T-AT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             2719 6 -     19938 CTT-T-AT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             26675 6 -     33796 Ctt-t-at
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              869 6 -     15404 CTT-T-AT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5136 6 -     32913 CTT-T-AT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15549 6 -     40346 CTT-T-AT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15813 6 +    216457 CTT-T-AT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15592 6 +     39636 CTT-T-AT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16641 6 -     17061 CTT-T-AT
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38678 6 -    112038 CTT-T-AT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4250 6 +     34062 CTT-T-AT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338991 6 +  18827391 CTT-T-AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5595 6 -     44032 CTT-T-AT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300317 6 - 135778131 ctt-T-AT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                  9526 6 +     15858 CTT-T-AT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601102 6 -    839153 Ctt-t-at
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404848 6 -   2368649 ctt-T-AT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374038 6 - 200372422 CTT-T-AT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4732 6 -      6605 CTT-T-AT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802941 4 +  53390261 --a-c-at
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8557 4 +     10921 --C-T-AT
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_24933             45494 4 -     47254 --T-T-AT
i Cryptoprocta_ferox.CryFer_flattened_line_24933         C 0 N 0
s Dasypus_novemcinctus.JH564415.1                          2087782 6 -   2246927 ctt-t-at
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288692 6 +  12879189 CTT-T-AT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623715 5 -  35494412 --TTT-AT
i Delphinapterus_leucas.KZ290073.1                       I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660322 4 -   1390856 --t-t-at
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  134842 4 -    198055 --T-T-AT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               1914 4 +     19438 --t-t-at
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237949 5 -    607251 --TTT-AT
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 C 0
s Enhydra_lutris.KZ291758.1                               24906079 4 +  41312741 --t-t-at
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12573485 4 +  14770903 --T-T-at
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037505 4 -   4378816 --T-T-gt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371439 4 +  39960074 --t-t-gt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408225 4 -    498745 --t-t-gt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258547 6 +  21539334 CTT-T-AT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63266 5 -    133382 --ttt-at
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3482 5 +      7672 --ttt-at
i Eubalaena_japonica.EubJap_flattened_line_118172        I 1 C 0
s Eulemur_albifrons.k141_51491                               11653 6 -     24895 ctt-t-at
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39365 6 -     70999 ctt-t-at
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83325 6 +    112731 ctt-t-at
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39897 6 +     68309 ctt-t-at
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50222 6 -     65740 CTT-T-AT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20852 6 -     75513 CTT-T-AT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45045 6 -     97555 CTT-T-AT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1772 6 +     30972 CTT-T-AT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39495 6 -     52037 ctt-t-at
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55896 6 -    111500 ctt-t-at
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242513 4 - 206538554 --t-t-at
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112295 4 - 205367284 --t-t-at
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23643 4 -     30238 --T-T-AT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14855 6 +     18121 CTT-T-AT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89625 5 -     95226 --TTT-AT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 1 C 0
s Gorilla_beringei.k141_3358147                                657 6 -      8343 CTT-T-AT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250152 6 - 186649187 ctt-T-AT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11586 6 -     40692 CTT-T-AT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32988 6 +     49394 ctt-t-at
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57856 6 -     66874 ctt-t-at
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6733 6 -     42923 CTT-T-AT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13729 6 -     53142 CTT-T-AT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26408 4 -    327341 --T-T-AT
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7377 5 +     48891 --TTT-GT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10872 6 +     12639 TTT-T-AT
i Heterohyrax_brucei.HetBruBak_scaffold_99956            I 3 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5966 5 -     36432 --ttt-at
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 1 C 0
s Hoolock_leuconedys.ctg274                                    138052 6 -    630532 CTC-T-AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  64580 1 +     83186 --T-----
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               1080 6 +     12352 CTT-T-AT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8263 6 +     55766 CTT-T-AT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047607 6 + 191637585 CTC-T-AT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796939 6 +  11177569 CTC-T-AT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     374995 6 +   7955117 ctT-T-AT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2435083                                     933 6 +      1070 CTT-T-AT
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1502 5 -     16823 --ttt-at
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64002 5 -     97402 --TTT-AT
i Kogia_breviceps.KogBre_flattened_line_3970             I 1 C 0
s Lagothrix_lagothricha.k141_246028                          39394 6 +    110728 CTT-T-AT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58995 4 -     65777 --T-T-AT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756378 6 +  30322482 ctt-t-at
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        5052 6 -      5330 CTT-T-AT
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16490 6 -     16762 CTT-T-AT
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16788 6 -     17065 CTT-T-AT
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6313 6 -     11567 CTT-T-AT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7694 6 -     12945 CTT-T-AT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5032 6 +     29618 CTT-C-AT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5031 6 +     31569 CTT-C-AT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5039 6 +     24756 CTT-C-AT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5036 6 +     16388 CTT-C-AT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809164 4 -   3914936 --t-t-at
i Leptonychotes_weddellii.KB714746.1                     I 2 C 0
s Lipotes_vexillifer.KE559953.1                             333025 5 +    662738 --ttt-at
i Lipotes_vexillifer.KE559953.1                          I 1 C 0
s Lophocebus_aterrimus.ctg367                               328727 6 -   1826925 CTT-T-AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39076038 6 +  43346337 ctt-t-at
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41610341 4 +  59628241 --t-t-at
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              41008 6 -     61512 CTT-T-AT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368636 6 -  60120075 CTT-T-AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20955 6 +     30207 CTT-T-AT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18058 6 -     24934 CTT-T-AT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20842 6 +     30527 CTT-T-AT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32031 6 -     50087 CTT-T-AT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41769 6 +     51645 CTT-T-AT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410343 6 - 187317192 ctt-t-at
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395226 6 +  25927173 ctt-t-at
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44358 6 -     62418 CTT-T-AT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21045 6 +     24253 CTT-T-AT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40802 6 +     59329 CTT-T-AT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266634 6 +    668171 CTT-T-AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17980 6 +     21031 CTT-T-AT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31712 6 +     33478 CTT-T-AT
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218985 4 -    270270 --T-T-AT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318110 6 +  24302211 CTT-T-AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352942 6 -    752769 CTT-T-AT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669726 4 -    737560 --t-t-gt
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217020 4 +    317179 --t-t-gt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7489088 6 +  40650429 CTT-T-GT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146062 4 +    207569 --T-T-AT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14091 4 -     74585 --T-T-AT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79567 5 +     93471 --ttt-at
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 1 C 0
s Mico_argentatus.k141_582562                                 6072 6 +     17804 CTT-T-AT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6845 6 -     12984 CTT-T-AT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14807 6 -     26561 CTT-T-AT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980636 6 +  93316391 ctt-t-at
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180296 5 +    200668 --T-TTAT
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360656 4 -   8254450 --t-t-at
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39557 4 -     48117 --T-T-AT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         18021 6 -     27822 CTT-T-AT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4180 4 +     27589 --t-t-at
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     48498 6 -     62432 CTT-T-AT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351458 5 +    437263 --TTT-AT
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174466 5 +    366855 --TTT-AT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22529 5 -     82753 --TTT-AT
i Moschus_moschiferus.MosMos_scaffold_13123              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14181 4 -     63510 --T-T-AT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          33394 4 +     47283 --T-T-AT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343135 4 +  14710649 --t-t-at
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9787846 4 +  10118263 --t-t-at
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378233 4 +   6019432 --t-t-at
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18476 4 -     39439 --t-t-at
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1791 4 +      3929 --T-T-AC
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              109683 6 +    130748 TTT-T-GT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 349 C 0
s Nasalis_larvatus.k141_1350636                              24386 6 +     34575 CTT-T-AT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464576 4 -  31847680 --t-t-at
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225627 5 -   7148211 --TTT-AT
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122681 4 -    149072 --T-T-AT
i Noctilio_leporinus.NocLep_scaffold_7894                I 1 C 0
s Nomascus_annamensis.k141_1771965                           49337 6 -    132029 CTC-T-AT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5433 6 -     16345 CTC-T-AT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11316 6 +     22201 CTC-T-AT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409653 6 -  22158432 CTC-T-AT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21716 6 -     54323 CTC-T-AT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193957 4 +   9404916 --t-t-at
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447349 4 +   2017862 --t-t-at
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434520 5 -    630418 --TTT-AT
i Odocoileus_virginianus.KZ100018.1                      I 1 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12508 5 +    150152 --ttt-at
i Okapia_johnstoni.LVCL01S0005463.1                      I 1 C 0
s Orcinus_orca.KB316932.1                                  8094897 5 +  10937097 --TTT-AT
i Orcinus_orca.KB316932.1                                I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35023 4 +    559221 --t-t-at
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26402497 5 -  44047080 --TTT-GT
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3016 5 +     17875 --TTT-GT
i Ovis_canadensis.OviCan_scaffold_67953                  I 1 C 0
s Pan_troglodytes.CM009242.2                               1467540 6 - 189151597 ctt-T-AT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20231 4 -    230217 --T-T-AT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18457557 4 -  18783137 --t-t-at
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968286 4 +   8748460 --t-t-at
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1613943 5 +   2937107 --TTT-GT
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                   238954 6 - 183742232 ctt-t-at
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5421 6 +     21308 CTT-T-AT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286458 6 -  20919399 CTT-T-AT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18074 6 -     27687 CTT-T-AT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11210 6 +     16796 CTT-T-AT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18020 6 -     23640 CTT-T-AT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11147 4 +     78924 --T-T-AC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10755 5 -     15039 --TTT-AT
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 1 C 0
s Piliocolobus_badius.k141_2495623                            4840 6 +      7560 CTT-T-AT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60547 6 -     63152 CTT-T-AT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43146 6 +     45295 CTT-T-AT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     825 6 +      5735 ctt-t-at
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45673 4 +     46691 --T-T-AT
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61028 6 +    207309 CCT-T-AT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2148 6 -     25401 CCT-T-AT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27863 6 +     58159 CCT-T-AT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28139 6 +     63561 CCT-T-AT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27902 6 +     51148 CCT-T-AT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552895 6 -   4542175 CCT-T-AT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27886 6 +     51125 CCT-T-AT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2839 5 -      8168 --ttt-at
i Platanista_gangetica.PlaMin_flattened_line_167872      I 1 C 0
s Plecturocebus_bernhardi.k141_2549090                        4318 6 +     39866 CTT-T-AT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38806 6 -     87950 CTT-T-AT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39199 6 -     88961 CTT-T-AT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3899 6 -     39403 CTT-T-AT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38852 6 +     87928 CTT-T-AT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3896 6 -     60166 CTT-T-AT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10832 6 -     67232 CTT-T-AT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38748 6 -     90634 CTT-T-AT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40216 6 +     89403 CTT-T-AT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173157 6 - 189387572 ctt-T-AT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188155 6 -   9816681 CTT-T-AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23326 6 +     69807 CTT-T-AT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40521 6 -     80239 CTT-T-AT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8029 6 +     14086 CTT-T-AT
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979536 6 +   4620579 ctt-t-at
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562118 6 -   2598838 ctt-t-at
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79205 6 -     79582 CTT-T-AT
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              360 6 -     11706 CTT-T-AT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4095 6 -     30655 CTT-T-AT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30420 6 +     46564 CTT-T-AT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90711 6 -     98465 ctt-t-at
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4333 6 +     35169 ctt-t-at
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47547 5 -     66298 --ttt-at
i Pteronotus_parnellii.KE847780.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4230 4 -     10349 --T-T-AT
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 C 0
s Pteropus_alecto.KB030862.1                               5836457 4 -  28871421 --t-t-at
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533033 4 -   4952924 --t-t-at
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095109 4 +  38429054 --t-t-at
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51477 5 +     55069 --TTT-AT
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2908571 4 +   3329780 --t-t-at
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 537
s Rhinopithecus_bieti.k119_221883                            24544 6 +     27361 CTT-T-AT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117903 6 + 195417433 ctt-t-at
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232152 6 -   7961872 CTT-T-AT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70504 4 -    116970 --T-T-AT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1125626                              16544 6 +     16959 CTT-T-AT
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38394 6 +     72255 CTT-T-AT
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            11035 6 +     11432 CTT-T-AT
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16409 6 -     16755 CTT-T-AT
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14980 6 -     15289 CTT-T-AT
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386976 6 - 209938924 CTT-T-AT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7840 6 +     22212 CTT-T-AT
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16338 6 +     39756 CTT-T-AT
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6083 5 +     16473 --TTT-GT
i Saiga_tatarica.SaiTat_scaffold_39512                   I 1 C 0
s Sapajus_apella.ctg103                                     234526 6 +   5703754 CTT-T-AA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4116 6 +     21866 CTT-T-AA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112024 4 +    313613 --T-C-AT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21034 6 +     27374 CTT-T-AT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24549 6 +     58920 CTT-T-AT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11046 6 -     45317 CTT-T-AT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18703 6 -     42441 CTT-T-AT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21385 6 -     29113 CTT-T-AT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24457 6 -     48123 CTT-T-AT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854211 4 -   1910179 --T-T-AT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              2093 4 -     97271 --T-T-AT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120776 4 +    196729 --T-T-AT
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                    6639498 5 +  69701581 --ttt-at
i Sus_scrofa.CM000828.4                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_199                       386629 6 +   1523678 CAT-T-AT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                24635 6 -     25844 TTT-T-GA
i Tamandua_tetradactyla.TamTet_scaffold_67439            I 346 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187283 4 +    199430 --t-t-at
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101238 4 -    539355 --T-T-AT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                2992 6 +      6850 CTT-T-AG
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3076 6 +     20590 CTT-T-AG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348939 6 - 186847797 ctt-T-AT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                    9725 6 -     31044 CTT-C-AT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475334 5 -    610378 --T-TCAT
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_1189070                        16598 6 +     26378 CTT-T-AT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29279 6 -     78344 CTT-T-AT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15919 6 +     25722 CTT-T-AT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24142 6 -     62838 CTT-T-AT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24261 6 +     46913 CTT-T-AT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5069 6 -     28527 CTT-T-AT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26081 6 -     64340 CTT-T-AT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24118 6 -     63452 CTT-T-AT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5560 6 +     22490 CTT-T-AT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3180 6 +      4141 CTT-T-AT
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5986 6 -     13050 CTT-T-AT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251223 6 -   6242583 CTT-T-AT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56955 6 +     59866 CTT-T-AT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478686 6 -  10818551 ctt-t-at
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB338335.1                                   39 6 -       332 ttt-t-at
i Tupaia_chinensis.KB338335.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3196 6 -     70247 TTT-T-AT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359636 5 -  33153633 --ttt-at
i Tursiops_truncatus.MRVK01000835.1                      I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103442 4 -    105689 --T-C-AT
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177306 4 +   5085361 --t-a-at
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  21166 6 -     30710 ctt-t-ac
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20074 6 -    147434 CTT-T-AC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74721 4 +   5488506 --t-t-at
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100703 4 -    112863 --T-T-AT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162286 6 -    224448 ATT-T-AC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24568 4 -     86975 --T-T-AT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2660542            291 5 +       358 --ttt-at
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      I 1 C 0
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Spermophilus_dauricus.KZ294078.1                         1855187 217 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_galeritus.HipGal_scaffold_23202               45096 2 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1545805 2 -   1711038 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        306 3 +     36723 GC--A
s Acinonyx_jubatus.LLWD01001279.1                           808858 3 +   1699592 gt--A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410627 3 +  29979442 aa--a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            211544 3 +    347723 at--a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43617 3 +     53615 AC--A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39432 3 +     44087 AC--A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         12861 3 -     21945 AC--A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14539 3 +     32033 AC--A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             68355 3 -     84148 AT--A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40578 3 -     78289 AT--A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40026 3 +     55831 AT--A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38467 3 -     64179 AT--A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20110 3 -     24835 AT--A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37093 3 +     45454 AT--A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42792 3 +     70886 AT--A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4919 3 +     30854 AT--A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29058 3 +     42133 AT--A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583567 3 +   2318259 GT--A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172294 3 -    412891 AT--A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48663 3 -     68529 GT--A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46863 3 -     65372 TC--A
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40611 3 +     43593 AC--A
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668621 3 +   5030052 AC--A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20263 3 -     23494 AC--A
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5399 3 +      8415 AC--A
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11622 3 -     32367 AC--A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 23
s Artibeus_jamaicensis.ArtJam_scaffold_859459                  252 3 -       293 AT--A
i Artibeus_jamaicensis.ArtJam_scaffold_859459            C 0 N 0
s Ateles_geoffroyi_b.tarseq_1536                               270853 3 +  21539123 AT--A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7024 3 +     48076 AT--A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2158 3 -     28759 AT--A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29710 3 +     44353 AT--A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45085 3 -     71267 AT--A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19141 3 -     33135 AT--A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2259 3 +     11645 AC--A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2261 3 -     19611 AC--A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955392 3 -  23207421 at--a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2600 3 -      4711 at--a
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84561 3 +    124022 GT--A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20092 3 +    288883 GT--A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354479 3 +  48749331 GT--A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753047 3 +   1948126 GT--A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543186 3 -  45695690 GT--A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528208 3 -   4408762 GT--A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   4045 3 +     28062 AC--A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39340 3 -     91139 AC--A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16865 3 +     95584 AC--A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16778 3 +    119600 AC--A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5970 3 -     13885 AC--A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14656 3 +     17162 AC--A
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449612 3 + 189096842 AC--A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15905 3 -     18408 AC--A
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629387 3 +  17673402 aA--A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663673 3 +   7040546 aA--A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207333 3 +   1652518 aA--A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501074 3 +  60362399 AT--A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4704 3 -     23171 AT--A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218065 3 +   9314153 at--a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41611190 3 +  59632846 at--a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45102760 3 -  63665305 at--a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407278 3 -  46296322 GT--A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589551 3 +  44709034 GT--A
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265395 3 +    496798 ac--a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                192 3 +      5315 AT--A
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75038 3 -    217609 AT--A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1190 3 -     12580 AC--A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39076 3 +     53515 AC--A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367308 3 -  26074798 AC--A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4197 3 -     34880 AC--A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63292 3 -     89041 AC--A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13666 3 -     50533 AC--A
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488037 3 -  27778364 at--a
i Ceratotherium_simum.JH767749.1                         C 0 I 228
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          14870 3 +     27315 AT--A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 228
s Cercocebus_atys.KQ010504.1                                136777 3 -   4669795 ac--a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40518 3 +     47900 AC--A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40350 3 -     44860 AC--A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40332 3 -    148725 AC--A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23318 3 -     40656 AC--A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3326 3 +     20796 AC--A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7581 3 -     17524 AC--A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23273 3 -     34525 AC--A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7993 3 -     25376 AC--A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360470 3 -  39242232 AC--A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266298 3 +  21565898 AC--A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27744 3 -     45857 AC--A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23535 3 -     32606 AC--A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27184 3 +     27662 AC--C
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21234 3 +     70610 AC--A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18099 3 +     36323 AC--A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             2725 3 -     19938 AT--A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 21
s Cheirogaleus_major.k141_666340                             26681 3 -     33796 ac--a
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              875 3 -     15404 AC--A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5142 3 -     32913 AC--A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15555 3 -     40346 AC--A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15819 3 +    216457 AC--A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15598 3 +     39636 AC--A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16647 3 -     17061 AC--A
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38684 3 -    112038 AC--A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4256 3 +     34062 AC--A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                338997 3 +  18827391 AC--A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5601 3 -     44032 AC--A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300323 3 - 135778131 AC--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                  9532 3 +     15858 AT--A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 22
s Choloepus_hoffmanni.KN194906.1                            601108 3 -    839153 at--a
i Choloepus_hoffmanni.KN194906.1                         C 0 I 22
s Colobus_angolensis.KN981557.1                             404854 3 -   2368649 AC--A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374044 3 - 200372422 AC--A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4738 3 -      6605 AC--A
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802945 3 +  53390261 at--G
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8561 3 +     10921 AT--A
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129                98 3 +     87169 AT--A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         N 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2087788 3 -   2246927 at--a
i Dasypus_novemcinctus.JH564415.1                        C 0 I 22
s Daubentonia_madagascariensis.ctg71                        288698 3 +  12879189 AC--A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623720 3 -  35494412 AT--A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660326 3 -   1390856 at--a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 226
s Diceros_bicornis.DicBicMic_scaffold_5955                  134846 3 -    198055 AT--A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 498
s Eidolon_helvum.AWHC01266696.1                               1918 3 +     19438 at--a
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237954 3 -    607251 GT--A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906083 3 +  41312741 at--a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12573489 3 +  14770903 ag--a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037509 3 -   4378816 at--a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371443 3 +  39960074 at--a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408229 3 -    498745 at--a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258553 3 +  21539334 AC--A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63271 3 -    133382 at--a
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3487 3 +      7672 at--a
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11659 3 -     24895 ac--a
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39371 3 -     70999 ac--a
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83331 3 +    112731 ac--a
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39903 3 +     68309 ac--a
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50228 3 -     65740 AC--A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20858 3 -     75513 AC--A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45051 3 -     97555 AC--A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1778 3 +     30972 AC--A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39501 3 -     52037 ac--a
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55902 3 -    111500 ac--a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242517 3 - 206538554 gt--A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112299 3 - 205367284 gt--A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23647 3 -     30238 GT--A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14861 3 +     18121 AT--A
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 65
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89630 3 -     95226 GT--A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Gorilla_beringei.k141_3358147                                663 3 -      8343 GC--A
i Gorilla_beringei.k141_3358147                          C 0 I 72
s Gorilla_gorilla.LT578341.1                                250158 3 - 186649187 GC--A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11592 3 -     40692 AC--A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32994 3 +     49394 ac--a
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57862 3 -     66874 ac--a
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6739 3 -     42923 AC--A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13735 3 -     53142 AC--A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26412 3 -    327341 AT--A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7382 3 +     48891 GT--A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10878 3 +     12639 AT--A
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 I 32
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5971 3 -     36432 at--a
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545807 3 -   1711038 at--a
i Hipposideros_armiger.JXIK01000431.1                    I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45098 3 +     49977 at--a
i Hipposideros_galeritus.HipGal_scaffold_23202           I 2 C 0
s Hoolock_leuconedys.ctg274                                    138058 3 -    630532 GC--A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  64581 3 +     83186 AT--A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               1086 3 +     12352 GC--A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8269 3 +     55766 GC--A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047613 3 + 191637585 GC--A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796945 3 +  11177569 GC--A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375001 3 +   7955117 GC--C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 23
s Indri_indri.k141_2435083                                     939 3 +      1070 AC--A
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1507 3 -     16823 at--a
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64007 1 -     97402 A----
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39400 3 +    110728 AT--A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    58999 3 -     65777 AG--A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 72
s Lemur_catta.scaffold_24                                 14756384 3 +  30322482 ac--a
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        5058 3 -      5330 AC--A
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16496 3 -     16762 AC--A
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16794 3 -     17065 AC--A
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6319 3 -     11567 AC--A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7700 3 -     12945 AC--A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5038 3 +     29618 GC--A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5037 3 +     31569 GC--A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5045 3 +     24756 TC--A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5042 3 +     16388 GC--A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809168 2 -   3914936 at---
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333030 3 +    662738 at--a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328733 3 -   1826925 AC--A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39076044 3 +  43346337 at--a
i Loxodonta_africana.GL010049.1                          C 0 I 7
s Lycaon_pictus.CM007581.1                                41610345 3 +  59628241 at--a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              41014 3 -     61512 AC--A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368642 3 -  60120075 AC--A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20961 3 +     30207 AC--A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18064 3 -     24934 AC--A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20848 3 +     30527 AC--A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32037 3 -     50087 AC--A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41775 3 +     51645 AC--A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410349 3 - 187317192 ac--a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395232 3 +  25927173 ac--a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44364 3 -     62418 AC--A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21051 3 +     24253 AC--A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40808 3 +     59329 AC--A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266640 3 +    668171 AC--A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17986 3 +     21031 AC--A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31718 3 +     33478 AC--A
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218989 3 -    270270 AT--A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318116 3 +  24302211 AC--A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352948 3 -    752769 AC--A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669730 3 -    737560 at--A
i Manis_javanica.JSZB01003497.1                          C 0 I 9
s Manis_pentadactyla.KN006162.1                             217024 3 +    317179 at--a
i Manis_pentadactyla.KN006162.1                          C 0 I 9
s Marmota_marmota.CZRN01000018.1                           7489094 3 +  40650429 AC--C
i Marmota_marmota.CZRN01000018.1                         C 0 I 23
s Megaderma_lyra.MegLyr_scaffold_4542                       146066 3 +    207569 AT--A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14095 3 -     74585 AT--A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79572 5 +     93471 ataca
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 6078 3 +     17804 AC--A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6851 3 -     12984 AC--A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14813 3 -     26561 AC--A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980642 3 +  93316391 ac--a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180301 3 +    200668 GT--A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360660 3 -   8254450 at--a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39561 3 -     48117 AT--A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         18027 3 -     27822 AC--A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4184 2 +     27589 at---
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     48504 3 -     62432 AC--A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351463 3 +    437263 AT--A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174471 3 +    366855 AT--A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22534 3 -     82753 AT--A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14185 3 -     63510 AT--A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 32
s Murina_feae.MurFea_scaffold_17764                          33398 3 +     47283 AG--A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343139 3 +  14710649 at--a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9787850 3 +  10118263 aa--a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378237 3 +   6019432 aa--a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18480 3 -     39439 aa--a
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1795 3 +      3929 AC--A
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              109689 3 +    130748 AT--A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 21
s Nasalis_larvatus.k141_1350636                              24392 3 +     34575 AC--A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464580 2 -  31847680 at---
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225632 3 -   7148211 AT--A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122685 3 -    149072 AC--A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49343 3 -    132029 GC--A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5439 3 -     16345 GC--A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11322 3 +     22201 TC--A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409659 3 -  22158432 GC--A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21722 3 -     54323 GC--A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193961 3 +   9404916 at--a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447353 2 +   2017862 at---
i Odobenus_rosmarus.KB229312.1                           C 0 I 30
s Odocoileus_virginianus.KZ100018.1                         434525 3 -    630418 GT--A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12513 3 +    150152 gt--a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8094902 3 +  10937097 AT--A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35027 3 +    559221 at--a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26402502 3 -  44047080 GT--A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3021 3 +     17875 GT--A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467546 3 - 189151597 GC--A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20235 3 -    230217 GT--A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18457561 3 -  18783137 gt--A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968290 3 +   8748460 gt--A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1613948 3 +   2937107 GT--A
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   238960 3 - 183742232 ac--a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5427 3 +     21308 AC--A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286464 3 -  20919399 AC--A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18080 3 -     27687 AC--A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11216 3 +     16796 AC--A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18026 3 -     23640 AC--A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11151 3 +     78924 AC--A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10760 3 -     15039 AT--A
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4846 3 +      7560 AC--A
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60553 3 -     63152 AC--A
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43152 3 +     45295 AC--A
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     831 3 +      5735 ac--a
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45677 3 +     46691 AG--A
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61034 3 +    207309 AC--A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2154 3 -     25401 AC--A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27869 3 +     58159 AC--A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28145 3 +     63561 AC--A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27908 3 +     51148 AC--A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552901 3 -   4542175 AC--A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27892 3 +     51125 AC--A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2844 3 -      8168 at--a
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4324 3 +     39866 AC--A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38812 3 -     87950 AC--A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39205 3 -     88961 AC--A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3905 3 -     39403 AC--A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38858 3 +     87928 AC--A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3902 3 -     60166 AC--A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10838 3 -     67232 AC--A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38754 3 -     90634 AC--A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40222 3 +     89403 AC--A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173163 3 - 189387572 GC--A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188161 3 -   9816681 GC--A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23332 3 +     69807 AC--A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40527 3 -     80239 AC--A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8035 3 +     14086 AT--A
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 I 32
s Prolemur_simus.MPIZ01000396.1                            1979542 3 +   4620579 ac--a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562124 3 -   2598838 ac--a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79211 3 -     79582 AC--A
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              366 3 -     11706 AC--A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4101 3 -     30655 AC--A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30426 3 +     46564 GC--A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90717 3 -     98465 ac--a
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4339 3 +     35169 ac--a
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47552 3 -     66298 at--a
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4234 3 -     10349 AA--A
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 I 32
s Pteropus_alecto.KB030862.1                               5836461 3 -  28871421 at--a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533037 3 -   4952924 at--a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095113 3 +  38429054 gt--A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51482 3 +     55069 GT--A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909112 3 +   3329780 at--a
i Rhinolophus_sinicus.LVEH01000134.1                     I 537 C 0
s Rhinopithecus_bieti.k119_221883                            24550 3 +     27361 AC--A
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117909 3 + 195417433 ac--a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232158 3 -   7961872 AC--A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70508 3 -    116970 AT--A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1125626                              16550 3 +     16959 AC--A
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38400 3 +     72255 AC--A
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            11041 3 +     11432 AC--A
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16415 3 -     16755 AC--A
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14986 3 -     15289 AC--A
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386982 3 - 209938924 AC--A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7846 3 +     22212 AC--A
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16344 3 +     39756 AC--A
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6088 3 +     16473 GT--A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234532 3 +   5703754 AC--A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4122 3 +     21866 AC--A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112028 3 +    313613 AT--G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21040 3 +     27374 AC--A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24555 3 +     58920 AC--A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11052 3 -     45317 AC--A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18709 3 -     42441 AC--A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21391 3 -     29113 AC--A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24463 3 -     48123 AC--A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854215 3 -   1910179 AT--A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 34
s Spilogale_gracilis.SpiGra_flattened_line_13525              2097 3 -     97271 AT--G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 29
s Suricata_suricatta.SurSur_flattened_line_6629             120780 3 +    196729 AT--A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6639503 3 +  69701581 at--a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386635 3 +   1523678 GC--A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                24641 3 -     25844 AT--A
i Tamandua_tetradactyla.TamTet_scaffold_67439            C 0 I 21
s Tapirus_indicus.TapInd_scaffold_7432                      187287 3 +    199430 at--a
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101242 3 -    539355 AT--A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                2998 3 +      6850 AC--A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3082 3 +     20590 AC--A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348945 3 - 186847797 AC--A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                    9731 3 -     31044 AT--A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475339 3 -    610378 AT--A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16604 3 +     26378 AC--A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29285 3 -     78344 AC--A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15925 3 +     25722 AC--A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24148 3 -     62838 AC--A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24267 3 +     46913 AC--A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5075 3 -     28527 AC--A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26087 3 -     64340 AC--A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24124 3 -     63452 AC--A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5566 3 +     22490 AC--A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3186 3 +      4141 AC--A
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5992 3 -     13050 GC--A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251229 2 -   6242583 -C--A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56961 3 +     59866 AC--A
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478692 3 -  10818551 gt--a
i Trichechus_manatus.JH594705.1                          C 0 I 7
s Tupaia_chinensis.KB338335.1                                   45 3 -       332 gt--a
i Tupaia_chinensis.KB338335.1                            C 0 I 67
s Tupaia_tana.TupTan_flattened_line_394                       3202 3 -     70247 GT--A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359641 3 -  33153633 at--a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103446 3 -    105689 AT--G
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177310 3 +   5085361 aa--a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  21172 3 -     30710 ac--a
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20080 3 -    147434 AC--A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74725 3 +   5488506 aa--a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100707 3 -    112863 AT--A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162292 3 -    224448 AC--A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 19
s Zalophus_californianus.ZalCal_flattened_line_17732         24572 2 -     86975 AT---
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 30
s Ziphius_cavirostris.ZipCav_flattened_line_2660542            296 3 +       358 at--a
i Ziphius_cavirostris.ZipCav_flattened_line_2660542      C 0 N 0
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Spermophilus_dauricus.KZ294078.1                         1855187 217 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        309 66 +     36723 GTA---TTTT-T--A-----TGATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-G------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
s Acinonyx_jubatus.LLWD01001279.1                           808861 67 +   1699592 ATA---TTGT-A--A--A--TCATA----CATT-GA-TT--T-ACACA-G-TG-T---T-T------G---T----TATTC-TGC--------TGTTTGGCTTCGTGTTAA--Aa-ct
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410630 32 +  29979442 ata---tttt-t--a----attatc----caTT-AA-TT--T-ACGTA-G-TG-----------------------------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 31
s Ailurus_fulgens.LNAC01001112.1                            211547 32 +    347723 ata---tttt-t--a----atcatc----CATT-AA-TT--T-ACATA-G-TG-----------------------------------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 31
s Allenopithecus_nigroviridis.k141_3755588                   43620 66 +     53615 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39435 66 +     44087 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         12864 40 -     21945 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACT--------------------------------------
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14542 40 +     32033 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACT--------------------------------------
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             68358 66 -     84148 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTG--------TATTTCCCTCAGTGTTAA--GA-AT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40581 66 -     78289 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ATCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TATTTCCCTCAGTGTTAA--GA-GT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40029 66 +     55831 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TATTTCCCTCAGTGTTAA--GA-GT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38470 66 -     64179 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ATCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TATTTCCTTCAGTGTTAA--GA-GT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20113 66 -     24835 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ATCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TATTTCCTTCAGTGTTAA--GA-AT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37096 66 +     45454 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ATCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TATTTCCCTCAGTGTTAA--GA-GT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42795 66 +     70886 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ATCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TATTTCCTTCAGTGTTAA--GA-GT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              4922 66 +     30854 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ATCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TATTTCCCTCAGTGTTAA--GA-GT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29061 66 +     42133 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ATCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TATTTCCTTCAGTGTTAA--GA-AT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583570 66 +   2318259 ACA---TTTT-T--GG----TCATC----CCTT-AA-TT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TGT-TTGCTCAGTGTTAA--AA-TT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172297 69 -    412891 ATA---TTTT-A--A--AA-TTATC----CATT-AG-TTCAC-A--CA-G-TC-T---TTT------A---T----TACTT-GCC--------TATTTTGCTCAGTGTTAA--CA-TT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48666 66 -     68529 ACA---TTTT-T--GG----TCATC----CATT-AA-TT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TAT-TTGCTCAGTGTTAA--AA-TT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46866 66 -     65372 GTA---TTTT-G--A-----TAATG----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TGTTTCCCTCAGTGTTAA--AA-GT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40614 66 +     43593 GTA---TTTT-G--A-----TAATG----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TGTTTCCTTCAGTGTTAA--AA-GT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668624 66 +   5030052 GTA---TTTT-G--A-----TAATG----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TGTTTCCCTCAGTGTTAA--AA-GT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20266 66 -     23494 GTA---TTTT-G--A-----TAATG----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TGTTTCCCTCAGTGTTAA--AA-GT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5402 66 +      8415 GTA---TTTT-G--A-----TAATG----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TGTTTCCCTCAGTGTTAA--AA-GT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11648 44 -     32367 -----------------------------------------T-ACTTA-G-AA-T---T-T------G---T----TATTT-CTC--------TATTTTGTATAGTGTTAA--AA-TT
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 23 C 0
s Arctocebus_calabarensis.k141_1364444                       15174 59 -     45910 -----------t--a-----aaaTG----CATT-TA-TT--T-ACTCA-T-TA-T---T-C------A---T----CGCTT-TTC--------TATTTTGCATGTTGTTCA--AA-TT
i Arctocebus_calabarensis.k141_1364444                   N 0 I 336
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   161 69 -     15198 ATA---TTTG-A--AG-A--TTATC----CATT-AG-TTTAC-A--CA-G-TC-T---TTT------A---C----TACTT-GCC--------TATTTTGCTCAGTGTTAA--CA-TT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             N 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270856 66 +  21539123 GTC---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---C----TACTT-CTC--------TGTTTCCCTCAGTGTTAA--AA-GT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7027 66 +     48076 GTC---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---C----TACTT-CTC--------TGTTTCCCTCAGTGTTAA--AA-GT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2161 66 -     28759 GTC---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---C----TACTT-CTC--------TGTTTCCCTCAGTGGTAA--AA-GT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29713 66 +     44353 GTC---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---C----TACTT-CTC--------TGTTTCCCTCAGTGTTAA--AA-GT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45088 66 -     71267 GTC---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---C----TACTT-CTC--------TGTTTCCCTCAGTGTTAA--AA-GT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19144 66 -     33135 GTC---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---C----TACTT-CTC--------TGTTTCCCTCAGTGTTAA--AA-GT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2262 67 +     11645 ATA---TTTT-T-AA-----TAATG----TATT-TA-TT--T-ACTCA-G-TA-T---T-C------A---T----CACTT-ATC--------TATTTTGCATAGTATTCA--GA-TT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2264 67 -     19611 ATA---TTTT-T-AA-----TAATG----TATT-TA-TT--T-ACTCA-G-TA-T---T-C------A---T----CACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955395 66 -  23207421 atg---tttt-t--a----gtcatc----catt-aa-tt--t-acat--ggta-t---t-t------g---t----tgctt-ctc--------tat-ttgctcggtgttaa--aa-tt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2603 66 -      4711 atg---tttt-t--a----gtcatc----catt-aa-tt--t-acat--ggta-t---t-t------g---t----tgctt-ctc--------tat-ttgctcggtgttaa--aa-tt
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84564 66 +    124022 ACA---TTTT-T--GG----TCATC----CCTT-AA-TT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TGT-TTGCTCAGTGTTAA--AA-TT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20095 66 +    288883 ACA---TTTT-T--GG----TCATT----CCTT-AA-TT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TAT-TTGCTCAGTGTTAA--AA-TT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354482 66 +  48749331 ACA---TTTT-T--GG----TCATN----CCTT-AA-TT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TAT-TTGCTCAGTGTTAA--AA-TT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753050 66 +   1948126 ACA---TTTT-C--GG----TCATC----CCTT-AA-TT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TAT-TTGCTCAGTGTTAA--AA-TT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543189 66 -  45695690 ACA---TTTT-T--GG----TCATC----CCTT-AA-TT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TAT-TTGCTCAGTGTTAA--AA-TT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528211 66 -   4408762 ACA---TTTT-C--GG----TCATC----CCTT-AA-TT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TAT-TTGCTCAGTGTTAA--AA-TT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   4048 65 +     28062 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G--C---T-G------G---T----GACTT-CTC--------TATTTCCCTCAGTGGTAA--AA-GT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39343 65 -     91139 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G--C---T-G------G---T----GACTT-CTC--------TATTTCCCTCAGTGGTAA--AA-GT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16868 65 +     95584 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G--C---T-G------G---T----GACTT-CTC--------TATTTCCCTCAGTGGTAA--AA-GT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16781 65 +    119600 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G--C---T-G------G---T----GACTT-CTC--------TATTTCCCTCAGTGGTAA--AA-GT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              5973 66 -     13885 GTA---TTTT-G--A-----TGATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------CATTTCCCTCAGTGTTAA--AA-GT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14659 66 +     17162 GTA---TTTT-G--A-----TGATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------CATTTCCCTCAGTGTTAA--AA-GT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449615 66 + 189096842 GTA---TTTT-G--A-----TGATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------CATTTTCCTCAGTGTTAA--AA-GT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15908 66 -     18408 GTA---TTTT-G--A-----TGATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------CATTTTCCTCAGTGTTAA--AA-GT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629390 67 +  17673402 CTG---TTTC-C--AG----CCATA----CATT-AA-TT--T-ACACA-G-TG-T---T-T------A---T----TACTT-CCC--------TGTTTTACTGAGTGTTAA--AA-GG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663676 67 +   7040546 CTG---TTTC-C--AG----CCATA----CATT-AA-TT--T-ACACA-G-TG-T---T-T------A---T----TACTT-CCC--------TGTTTTGCTGAGTGTTAA--AA-GG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207336 67 +   1652518 CTG---TTTC-C--AG----CCATA----CATT-AA-TT--T-ACACA-G-TG-T---T-T------A---T----TACTT-CCC--------TGTTTTACTGAGTGTTAA--AA-GG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501077 30 +  60362399 ATA---TTTT-A--A--A--TCATC----CATT-AA-TT--T-AC--A-G-TG-----------------------------------------------------------------
i CanFam4.chr16                                          C 0 I 31
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4707 30 -     23171 ATA---TTTT-A--A--A--TCATC----CATT-AA-TT--T-AC--A-G-TG-----------------------------------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 31
s Canis_lupus_dingo.QKWQ01000480.1                          218068 30 +   9314153 ata---tttt-a--a----atcatc----CATT-AA-TT--T-AC--A-G-TG-----------------------------------------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 31
s Canis_lupus_familiaris.chr16                            41611193 30 +  59632846 ata---tttt-a--a----atcatc----CATT-AA-TT--T-AC--A-G-TG-----------------------------------------------------------------
i Canis_lupus_familiaris.chr16                           C 0 I 31
s Canis_lupus_orion.HG994398.1                            45102763 30 -  63665305 ata---tttt-a--a----atcatc----CATT-AA-TT--T-AC--A-G-TG-----------------------------------------------------------------
i Canis_lupus_orion.HG994398.1                           C 0 I 31
s Capra_aegagrus.CM003241.1                               27407281 66 -  46296322 ACA---TTTT-T--GG----TCATC----CCTT-AA-TT--T-ACGT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TGT-TTGCTCAGTGTTAA--AA-TT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589554 66 +  44709034 ACA---TTTT-T--GG----TCATC----CCTT-AA-TT--T-ACGT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TGT-TTGCTCAGTGTTAA--AA-TT
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265398 64 +    496798 ata---tttt-a--a----ataatc----catT-CA-TT--C-TCTTG-C-TA-T---T-T------G---T----TACTT-TTT--------AGTTTTGCAAAGTGTTAA--A----
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                195 77 +      5315 ATG---TTTT-A--A--AA-TTATC----CATT-AG-TTTAC-A--CA-G-TT-T---TTT------A---C----TACTT-GCCTGTTTTCCTATTTTGCTCAGTGTTAA--CA-TT
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75041 66 -    217609 ATA---TTTT-T--A--A--TCATC----CATT-AG-TT--T-ACAC-AG-TA-G---T-T------G---T----TACTT-CCC--------TGT-TTGCTCAGGGCTAA--AA-TT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1193 66 -     12580 GTA---TTTT-G--A-----TGATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------CATTTCCCTCAGTGTTAA--AA-GT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39079 66 +     53515 GTA---TTTT-G--A-----TGATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------CATTTCCCTCAGTGTTAA--AA-GT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367311 66 -  26074798 GTA---TTTT-G--A-----TAATT----TATT-CA-TC--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TGTTTCCCTCAGTGTTAA--AG-GC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4200 66 -     34880 GTA---TTTT-G--A-----TAATT----TATT-CA-TC--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TGTTTCCCTCAGTGTTAA--AG-GC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63295 66 -     89041 GTA---TTTT-G--A-----TAATT----TATT-CA-TC--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TGTTTCCCTCAGTGTTAA--AG-GC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13669 67 -     50533 ATA---TTTT-A--A--A--TAATC----CATT-CA-TT--C-TCTTG-G-TA-T---T-T------G---T----TACTT-TTC--------AGTTTTGCAAAGTGTTAA--AA-TT
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488268 68 -  27778364 aca---tttt-t--a----atcaTC----CATTTCA-TT--T-ACACA-G-TA-T---T-T------G---T----TTTGT-CCC--------TCTTTTGATCAGTGTTAA--CA-TT
i Ceratotherium_simum.JH767749.1                         I 228 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15101 68 +     27315 ACA---TTTT-T--A--A--TCATC----CATTTCA-TT--T-ACACA-G-TA-T---T-T------G---T----TTTGT-CCC--------TCTTTTGATCAGTGTTAA--CA-TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 228 C 0
s Cercocebus_atys.KQ010504.1                                136780 66 -   4669795 gta---tttt-t--a-----taatC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40521 66 +     47900 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40353 66 -     44860 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40335 66 -    148725 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23321 66 -     40656 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3329 66 +     20796 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7584 66 -     17524 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23276 66 -     34525 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----GACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            7996 66 -     25376 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-ATC--------TATTTTCTGCAGTGTTAA--AA-CT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360473 66 -  39242232 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCC-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266301 66 +  21565898 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27747 66 -     45857 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23538 66 -     32606 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27187 66 +     27662 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21237 66 +     70610 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18102 66 +     36323 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             2749 26 -     19938 --------------------------------------------------------------------------------T-CCC--------TACTTTGCTCAGTGTTAT--AA-TT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 21 C 0
s Cheirogaleus_major.k141_666340                             26684 66 -     33796 a-t---tttt-a-aa-----taatg----catt-ta-tt--t-actta-c-ta-t---t-t------a---t----tactt-ctc--------tatttTGCATAGTCTTCA--AA-TT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              878 67 -     15404 att---tttt-a-aa-----taatg----catt-ta-tt--t-actta-c-ta-t---t-t------a---t----tactt-ctc--------tatttTGCATGGTCTTCA--AA-TT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5145 65 -     32913 GTA---TTTT-G--A-----TAATT----CATT-CA-TT--T-ACCCA-G-G-AC---T-C------C---T----TACTT-CTC--------TATTTCCCT-AGTGTTAA--AA-GT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15558 65 -     40346 GTA---TTTT-G--A-----TAATT----CATT-CA-TT--T-ACCCA-G-G-AC---T-C------C---T----TACTT-CTC--------TATTTCCCT-AGTGTTAA--AA-GT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15822 65 +    216457 GTA---TTTT-G--A-----TAATT----CATT-CA-TT--T-ACCCA-G-G-AC---T-C------C---T----TACTT-CTC--------TATTTCCCT-AGTGTTAA--AA-GT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15601 65 +     39636 GTA---TTTT-G--A-----TAATT----CATT-CA-TT--T-ACCCA-G-G-AC---T-C------C---T----TACTT-CTC--------TATTTCCCT-AGTGTTAA--AA-GT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16650 69 -     17061 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------GGAAT----TACTT-CTC--------CATTTGCCTGAGTGTTAA--AA-GT
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38687 65 -    112038 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G--C---T-G------G---T----GACTT-CTC--------TATTTCCCTCAGTGGTAA--AA-GT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4259 65 +     34062 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G--C---T-G------G---T----GACTT-CTC--------TATTTCCCTCAGTGGTAA--AA-GT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339000 66 +  18827391 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5604 66 -     44032 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300326 66 - 135778131 GTT---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                  9557 26 +     15858 --------------------------------------------------------------------------------T-CAC--------TACTTTGCTCAGTGTTAA--AA-TT
i Choloepus_didactylus.ChoDid_scaffold_70559             I 22 I 4
s Choloepus_hoffmanni.KN194906.1                            601133 26 -    839153 --------------------------------------------------------------------------------T-CAC--------TACTTTGCTCAGTGTTAA--AA-TT
i Choloepus_hoffmanni.KN194906.1                         I 22 I 4
s Colobus_angolensis.KN981557.1                             404857 66 -   2368649 GTA---TTTT-C--G-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374047 66 - 200372422 GTA---TTTT-C--G-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4741 66 -      6605 GTA---TTTT-T--G-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35802948 34 +  53390261 ATG---CTTT-A--A--A--CCATC----CATT-TA-TT--T-ACcca-a-tg-t---t-----------------------------------------------------------
i Condylura_cristata.JH655891.1                          C 0 I 39
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8564 66 +     10921 AAA---ATTT-T--A--A--GCAT-----CATT-AG-CT--A-ACATA-A-TA-T---T-T------G---T----TACTT-TCC--------CTTCTTGCTTAATGTTAA--AT-TT
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               101 67 +     87169 ATA---TTTT-A--A--A--TCATA----CATT-GA-TT--T-ATACA-G-TG-T---T-T------G---T----TATTC-TGC--------TGTTTTGCTCAGTGTTAA--GA-TT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2087813 26 -   2246927 --------------------------------------------------------------------------------T-CCC--------TACTTTGCTCAGTGTTAT--AA-TT
i Dasypus_novemcinctus.JH564415.1                        I 22 C 0
s Daubentonia_madagascariensis.ctg71                        288701 67 +  12879189 ATA---TTTT-T-AA-----TAATG----CATG-TA-TT--T-ACTCG-G-TG-T---T-C------A---T----TACTT-ACC--------TATTTTGCATAGTGTTCA--AA-TT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623723 66 -  35494412 GTG---TTTT-T--AG----TCATC----CATT-AA-TT--T-ACAT--GGTG-T---T-T------G---T----TGCTT-CTC--------TAT-TTGCTTGGTGTTAA--AA-TT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660555 68 -   1390856 aca---tttt-t--a----atcaTC----CATTTCA-TT--T-ACACA-G-TA-T---T-T------G---T----TTTGT-CCC--------TCTTTTGATCAGTGTTAA--AA-TT
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 226 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135347 68 -    198055 ACA---TTTT-T--A--A--TCATC----CATTTCA-TT--T-ACACA-G-TA-T---T-T------G---T----TTTGT-CCC--------TCTTTTGATCAGTGTTAA--AA-TT
i Diceros_bicornis.DicBicMic_scaffold_5955               I 498 C 0
s Eidolon_helvum.AWHC01266696.1                               1921 66 +     19438 ata---tttt-a--a----attatt----catt-ag-cT--T-AC-CA-A-TA-T---T-T------G---T----TGCTT-TTC--------TAATTTGGCCAGTATTTA--AC-TT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       237957 66 -    607251 GCA---TTAT-T--GG----TCATC----CATT-AA-CT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TAT-TTGCTCAGTGTTAA--AA-TT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906086 32 +  41312741 ata---tttt-t--a----atcacc----CATT-AA-TT--T-ACATA-G-TG-----------------------------------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 31
s Eptesicus_fuscus.JH977646.1                             12573492 72 +  14770903 gta---tttt-t--a---aattatg----catt-ag-TT--T-GCAca-g-ta-t---ttt------a---t----tacttttcc--------tATTTTGCTCAGTGTTAAAAAA-TT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037512 68 -   4378816 gta---tttt-t--a----attatc----catt-ca-tt--t-acaCA-G-TA-T---T-T------G---T----TATGTTCCC--------TATTTTGACCAGTGTTAA--AA-TT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371446 68 +  39960074 gta---tttt-t--a----atcatc----catt-ca-tt--t-acaca-g-ta-t---t-t------g---t----tatgttccc--------tattttgatcagtgttaa--aa-tt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408232 68 -    498745 gta---tttt-t--a----atcatc----catt-ca-tt--t-acaca-g-ta-t---t-t------g---t----tatgttccc--------tattttgatcagtgttaa--aa-tt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258556 66 +  21539334 GTA---TTTG-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTC-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63274 66 -    133382 atg---tttt-t--a----gtcatc----catt-aa-tt--t-acat--ggta-t---t-t------g---t----tgctt-ctc--------tat-ttgctcggtgttaa--aa-tt
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3490 66 +      7672 atg---tttt-t--a----gtcatc----catt-aa-tt--t-acat--ggta-t---t-t------g---t----tgctt-ctc--------tat-ttgctcggtgttaa--aa-tt
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11662 67 -     24895 ata---tttt-t-aa-----taatg----catt-ta-tt--t-actca-g-ta-t---t-c------a---t----tagtt-atc--------tattttgcatagtgttca--aa-tt
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39374 67 -     70999 ata---tttt-t-aa-----taatg----catt-ta-tt--t-actca-g-ta-t---t-c------a---t----tactt-atc--------tattttgcatagtgttca--aa-tt
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83334 67 +    112731 ata---tttt-t-aa-----taatg----catt-ta-tt--t-actca-g-ta-t---t-c------a---t----tactt-atc--------tattttgcatagtgttca--aa-tt
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39906 67 +     68309 ata---tttt-t-aa-----taatg----catt-ta-tt--t-actca-g-ta-t---t-c------a---t----tactt-atc--------tattttgcatagtgttca--aa-tt
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50231 67 -     65740 ATA---TTTT-T-AA-----TAATG----CATT-TA-TT--T-ACTCA-G-TA-T---T-C------A---T----TACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20861 67 -     75513 ATA---TTTT-T-AA-----TAATG----CATT-TA-TT--T-ACTCA-G-TA-T---T-C------A---T----TACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45054 67 -     97555 ATA---TTTT-T-AA-----TAATG----CATT-TA-TT--T-ACTCA-G-TA-T---T-C------A---T----TACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1781 67 +     30972 ATA---TTTT-T-AA-----TAATG----CATT-TA-TT--T-ACTCA-G-TA-T---T-C------A---T----TACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39504 67 -     52037 ata---tttt-t-aa-----taatg----catt-ta-tt--t-actca-g-ta-t---t-c------a---t----tactt-atc--------tattttgcatagtgttca--aa-tt
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55905 67 -    111500 ata---tttt-t-aa-----taatg----catt-ta-tt--t-actca-g-ta-t---t-c------a---t----tactt-atc--------tattttgcatagtgttca--aa-tt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242520 67 - 206538554 ATA---TTGT-A--A--A--TCATA----CATT-GA-TT--T-ACACA-G-TG-T---T-T------G---T----TATTC-TGC--------TGTTTGGCTTAGTGTTAA--AA-CT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112302 67 - 205367284 ATA---TTGT-A--A--A--TCATA----CATT-GA-TT--T-ACACA-G-TG-T---T-T------G---T----TATTC-TGC--------TGTTTGGCTTAGTGTTAA--AA-CT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23650 67 -     30238 ATA---TTGT-A--A--A--TCATA----CATT-GA-TT--T-ACACA-G-TG-T---T-T------G---T----TATTC-TGC--------TGTTTGGCTTAGTGTTAA--AA-CT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     118784 59 -    137831 -----------t--a-----aaaCG----CATT-TG-TT--T-ACTTA-T-TA-T---G-C------A---T----TGCTT-TCC--------TATTTTGCATGTTGTTCA--AA-TT
i Galago_moholi.ctg3793                                  N 0 I 308
s Galago_senegalensis.k141_991736                             2319 59 +     22493 -----------t--a-----aaaCG----CATT-TG-TT--T-ACTTA-T-TA-T---G-C------A---T----TGCTT-TCC--------TATTTTGCATGTTGTTCA--AA-TT
i Galago_senegalensis.k141_991736                        N 0 I 313
s Galagoides_demidoff.k141_561628                            14518 59 -     32986 -----------t--a-----aaaCG----CATT-TA-TT--T-GCTTA-T-TA-T---T-C------A---T----TGCTT-TCC--------TATTTTGCATGTTGTTCA--AA-TT
i Galagoides_demidoff.k141_561628                        N 0 I 307
s Galeopterus_variegatus.GalVar_scaffold_132127               2962 67 +      5976 ATA---TTTT-T--A--A--TAGTC----CATT-CA-AT--T-ATTCA-G-TA-T---A-T------G---T----TACTT-CTC--------TATTTTGCATAGTGTTAA--AA-TT
i Galeopterus_variegatus.GalVar_scaffold_132127          I 62 I 60
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89633 35 -     95226 ACA---TTTT-T--GG----TCATC----CATT-AA-TT--T-ACAT-GG-TA-T---T-T---------------------------------------------------------
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 30
s Gorilla_beringei.k141_3358224                                667 66 -      1229 GTA---TTTT-T--A-----TGATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-C------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
i Gorilla_beringei.k141_3358224                          I 31 C 0
s Gorilla_gorilla.LT578341.1                                250161 66 - 186649187 GTA---TTTT-T--A-----TGATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-G------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11595 67 -     40692 ATA---TTTT-T-AA-----TAATG----CATT-TA-TT--T-ACTCA-G-TA-T---T-C------A---T----TACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             32997 67 +     49394 ata---tttt-t-aa-----taatg----catt-ta-tt--t-actca-g-ta-t---t-c------a---t----tactt-atc--------tattttgcgtagtgttca--aa-tt
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57865 67 -     66874 ata---tttt-t-aa-----taatg----catt-ta-tt--t-actca-g-ta-t---t-c------a---t----tactt-atc--------tattttgcgtagtgttca--aa-tt
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6742 67 -     42923 ATA---TTTT-T-AA-----TAATG----CATT-TA-TT--T-ACTCA-G-TA-T---T-C------A---T----TACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13738 67 -     53142 ATA---TTTT-T-AA-----TAATG----CATT-TA-TT--T-ACTCA-G-TA-T---T-C------A---T----TACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26415 67 -    327341 ATA---TTTT-A--A--A--TCATA----CATT-GA-TT--T-ACACA-G-TG-T---G-T------G---T----TATTC-TGC--------TGTTTCGCTCAGTGTTAA--AA-TT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7385 66 +     48891 ACA---TTTT-T--GG----TCATC----CCTT-AA-TT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TGT-TTGCTCAGTGTTAA--AA-TT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10913 31 +     12639 ----------------------------------------------------------------------------TACTG-TGC--------TATTTTGTGTAGTGTTAA--AAATG
i Heterohyrax_brucei.HetBruBak_scaffold_99956            I 32 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                5974 66 -     36432 aca---tttt-t--a----gtcatc----catt-aa-tt--t-actt--ggta-t---t-t------g---t----tgctt-ccc--------tat-tttctcagtgttaa--aa-tt
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545810 67 -   1711038 ata---tttt-t--c----acCTTC----CATT-GG-CT--T-ACACA-G-TA-C---T-T------G---G----TACTT-TCC--------TGTTTTGCTTAGTGTTAA--AT-TT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45101 66 +     49977 at----tttt-t--c----accttc----catt-gg-ct--t-acaca-a-ta-c---t-t------g---t----tactt-tcc--------tattttgcttagtgttaa--at-tt
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138061 66 -    630532 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-C-GA-G---T-G------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  64584 67 +     83186 ACA---TTTT-A--A--A--TAATA----CATT-GA-TT--T-ACACA-G-TA-T---T-T------G---T----TACTC-TGC--------TGTTTTGCTCAGTGTTAA--AA-TT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               1089 66 +     12352 TTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-G------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8272 66 +     55766 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-G------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047616 66 + 191637585 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-G------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7796948 66 +  11177569 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-G------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375027 44 +   7955117 -----------------------------------------t-attca-a-ta-t---t-t------a---t----tattt-ctc--------tatttggtatagtattaA--AA-TT
i Ictidomys_tridecemlineatus.JH393364.1                  I 23 C 0
s Indri_indri.k141_2435083                                     942 67 +      1070 ATA---TTTT-T-AA-----TAATG----CATT-TA-TT--T-ACTCA-G-TA-T---T-C------A---T----CACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1510 66 -     16823 gtg---tttt-t--a----gtcatc----tatt-aa-tt--t-acat--ggtg-t---t-t------g---t----tgctt-ctc--------tat-ttgctcggtgttaa--aa-tt
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64008 65 -     97402 -TG---TTTT-T--CG----TCATG----CGTT-AA-TT--T-ACAT--GGTG-T---T-T------G---T----TGCTT-CTC--------TAT-TTGCTCGGTGTTAA--AA-TT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39403 66 +    110728 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---C----TACTT-CTC--------TATTTCCCTCAGTGTTAA--AA-GT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    28235 72 -     49555 ATA---GTTT-T--A--AA-TTATG----CATT-AG-TT--T-ACACA-G-TA-T---TTT------A---T----TACTTTTCC--------TGTTTTGCTCAGTGTTAAAAAA-TT
i Lasiurus_borealis.LasBor_scaffold_26245                I 697 I 167
s Lemur_catta.scaffold_24                                 14756387 67 +  30322482 ata---tttt-t-aa-----taatg----catt-ta-tt--t-actca-g-ta-t---t-c------a---t----tactt-atc--------tattttgcatagtgttca--aa-tt
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        5061 69 -      5330 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------GGAAT----TACTT-CTC--------CATTTGCCTGAGTGTTAA--AA-GT
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16499 69 -     16762 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------GGAAT----TACTT-CTC--------CATTTGCCTGAGTGTTAA--AA-GT
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16797 69 -     17065 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------GGAAT----TACTT-CTC--------CATTTGCCTGAGTGTTAA--AA-GT
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6322 66 -     11567 GTA---TTCT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AA---T-C------G---T----TACTT-CTC--------CATTTCCCTCAGTGTTAA--AA-GT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7703 66 -     12945 GTA---TTCT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AA---T-C------G---T----TACTT-CTC--------CATTTCCCTCAGTGTTAA--AA-GT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5041 67 +     29618 ATT---TTTT-A-AA-----TAATG----CATT-TA-TT--T-ACTGA-G-TA-G---T-C------A---T----TACTT-ATC--------TATTTTGCATGGTGTTCA--AA-TT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5040 67 +     31569 ATT---TTTT-A-AA-----TAATG----CATT-TA-TT--T-ACTGA-G-TA-G---T-C------A---T----TACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5048 66 +     24756 ATT---TTTT-A-AA-----TAATG----CATT--A-TT--T-ACTGA-G-TA-G---T-C------A---T----TACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5045 67 +     16388 ATT---TTTT-A-AA-----TAATG----CATT-TA-TT--T-ACTGA-G-TA-G---T-C------A---T----TACTT-ATC--------TATTTTGCATGGTGTTCA--AA-TT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809170 33 -   3914936 --aatatttt-t--a----atcatc----CATT-AA-CT--T-ACATA-G-TG-----------------------------------------------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 31
s Lipotes_vexillifer.KE559953.1                             333033 66 +    662738 gtg---tttt-t--a----gtcatc----catt-aa-tt--t-actt--ggtg-t---t-t------g---t----tgctt-ctc--------tat-ttgctcggtgttaa--aa-tt
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328736 66 -   1826925 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            1747 59 +     19643 -----------t--a-----aaaTG----CATT-TA-TT--T-ACTTA-T-TA-T---T-C------A---T----TGCTT-TCC--------TATTTTGCATGTTGTTCA--AA-TT
i Loris_lydekkerianus.k141_2031736                       N 0 I 323
s Loris_tardigradus.ctg83                                  5035406 59 -   6120653 -----------t--a-----aaaTG----CATT-TA-TT--T-ACTTA-T-TA-T---T-C------A---T----TGCTT-TCC--------TATTTTGCATGTTGTTCA--AA-TT
i Loris_tardigradus.ctg83                                N 0 I 322
s Loxodonta_africana.GL010049.1                           39076054 29 +  43346337 --------------a----gtaatc----catt-ta-tt--t-gcaca-g-ta-tttgt-----------------------------------------------------------
i Loxodonta_africana.GL010049.1                          I 7 I 28
s Lycaon_pictus.CM007581.1                                41610348 30 +  59628241 ata---tttt-a--a----atcatc----CATT-AA-TT--T-AC--A-G-TG-----------------------------------------------------------------
i Lycaon_pictus.CM007581.1                               C 0 I 31
s Macaca_arctoides.k141_1757516                              41017 66 -     61512 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368645 66 -  60120075 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                20964 66 +     30207 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18067 66 -     24934 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20851 66 +     30527 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32040 66 -     50087 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41778 66 +     51645 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410352 66 - 187317192 gta---tttt-t--a-----taaTC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395235 66 +  25927173 gta---tttt-t--a-----taatC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44367 66 -     62418 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21054 66 +     24253 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40811 66 +     59329 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266643 66 +    668171 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 17989 66 +     21031 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31721 66 +     33478 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                218992 67 -    270270 ATA---TTTT-A--A--A--CTATC----CATT-AG-CT--T-ACACA-A-CA-T---T-T------G---T----TACTT-TTC--------TATTTTGCTCAGTGTTAA--AC-TT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318119 66 +  24302211 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               352951 66 -    752769 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669742 56 -    737560 --------------------TCATC----TATT-AA-TT--T-ACACA-G-TA-T---T-T------C---T-----ATCT-ACC--------TATTTTGTTCAGTGTTAG--AA-TT
i Manis_javanica.JSZB01003497.1                          I 9 C 0
s Manis_pentadactyla.KN006162.1                             217036 56 +    317179 --------------------tcatC----TATT-AA-TT--T-ACACA-G-TA-T---T-T------G---T-----ACCT-ACC--------TATTTTGTTCAGTGTTAG--AA-TT
i Manis_pentadactyla.KN006162.1                          I 9 C 0
s Marmota_marmota.CZRN01000018.1                           7489120 44 +  40650429 -----------------------------------------t-actca-a-ta-t---t-t------a---t----tattt-ctc--------tattttgtatAGTATTAA--AA-TT
i Marmota_marmota.CZRN01000018.1                         I 23 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146069 67 +    207569 ATA---TTTT-T--AG----CTATT----CATT-AG-CT--T-ACACA-G-TA-T---T-T------G---T----TACTT-TCC--------TGTTTTGATTAGTGTTAA--AT-TT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14098 32 -     74585 ATA---TTTT-T--A--A--TCACC----CATT-CA-TT--T-ACGTA-G-TG-----------------------------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 31
s Mesoplodon_bidens.MesBid_scaffold_6114                     79577 66 +     93471 gtg---tttt-t--a----gtcatc----catt-aa-tt--t-acat--ggtg-t---t-t------g---t----tgctt-ctc--------tat-ttgctcggtgttaa--aa-tt
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 6081 66 +     17804 GTA---TTTT-G--A-----TGATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------CATTTCCCTCAGTGTTAA--AA-GT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6854 66 -     12984 GTA---TTTT-G--A-----TGATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------CATTTCCCTCAGTGTTAA--AA-GT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14816 66 -     26561 GTA---TTTT-G--A-----TGATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------CATTTCCCTCAGTGTTAA--AA-GT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980645 68 +  93316391 att---tttt-tcaa-----taatg----catt-ta-tt--t-actta-c-ta-t---t-C------A---T----TACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180304 69 +    200668 ACA---TTTT-A--A--A-GTTATC----CATT-CG-TTTAC-A--CA-G-TC-T---TTT------A---C----TACTT-GCC--------TATTTTGCTCAGTGTTAA--CA-TT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360663 57 -   8254450 ata---tttt-a--a---aattata----catt-ag-tT--T-ACTCA-G-TA-T---TTT------G---T----TACTCTTCC--------TATTTTGTT----------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39564 57 -     48117 ATA---TTTT-A--A--AA-TTATA----CATT-AG-TT--T-ACTCA-G-TA-T---TTT------G---T----TACTCTTCC--------TATTTTGTT----------------
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         18030 66 -     27822 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTATTAA--AA-CT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4186 33 +     27589 --aatatttt-t--a----atcatc----catt-aa-ct--t-acata-g-tg-----------------------------------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 31
s Mirza_zaza.k141_766280                                     48507 67 -     62432 att---tttt-a-aa-----taatg----catt-ta-tt--t-actta-c-ta-t---t-c------a---t----tactt-atc--------tatttTGCATAGTGTTCA--AA-TT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351466 66 +    437263 GTG---TTTT-T--AG----TCATC----CATT-AA-TT--T-ACAT--GGTG-T---T-T------G---T----TGCTT-CTC--------TAT-TTGCTTGGTGTTAA--AA-TT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174474 70 +    366855 ATA---TTTT-A--A--AA-TTACC----CATT-TG-TTGAC-A--CA-G-AC-T---TTG------A---T----TACTTTTCC--------TATTTTGCTCAGTGTTAA--AA-TT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22537 66 -     82753 ACA---TTTT-T--GG----TCATC----CCTT-AA-TT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TAT-TTGCTCAGTGTTAA--AA-TG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14220 31 -     63510 -----------------------------------------------------------------------C----TATTC-TGC--------TGTTTTGCTCAGTGTTAA--AA-TT
i Mungos_mungo.MunMun_flattened_line_18455               I 32 C 0
s Murina_feae.MurFea_scaffold_17764                          33401 72 +     47283 ATA---TTTT-G--A--AA-TTATA----CCTT-AG-CT--T-ACACA-G-TA-T---TTT------A---T----TACTTTTCC--------TAGTTTGCTCATTGTTAAAAAA-TT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343142 32 +  14710649 ata---tttt-t--a----atcacc----CATT-AA-TT--T-ACATA-G-TG-----------------------------------------------------------------
i Mustela_putorius.JH418006.1                            C 0 I 31
s Myotis_brandtii.KE162005.1                               9787853 72 +  10118263 ata---tttt-a--a---aattata----cctt-aG-TT--T-ACAca-g-ta-t---ttt------a---t----tacttttcc--------tATTTTGCTCATTGTTGAAAAA-TT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378240 72 +   6019432 aca---tttt-t--a---aattata----cctt-aG-TT--T-ACACa-g-ta-t---ttt------a---t----tacttttcc--------tATTTTGCTCATTGTTAAAAAA-tt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18483 72 -     39439 ata---tttt-t--a---aattata----cctt-AG-TG--T-ACAca-g-ta-t---ttt------a---t----tacttttcc--------taTTTTGCTCATTGTTAAAAAA-TT
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1798 71 +      3929 ATA---TTTT-T--A--AA-TTATA----CCTT-AG-TT--T-ACACA-G-TA-T---TTT------A---T----TACTTTTCC--------TGTTTTGCTCATTGTTAAA-AA-TT
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              109713 26 +    130748 --------------------------------------------------------------------------------T-CTC--------TACTTTGCTCAGTGTTAA--AA-TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 21 I 4
s Nasalis_larvatus.k141_1350636                              24395 66 +     34575 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464582 33 -  31847680 --aatatttt-t--a----atcatc----CATT-AA-CT--T-ACATA-G-TG-----------------------------------------------------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 31
s Neophocaena_asiaeorientalis.KZ687982.1                   1225635 66 -   7148211 GTG---TTTT-T--AG----TCATC----CATT-AA-TT--T-ACAT--GGTG-T---C-T------G---T----TGCTT-CTC--------TAT-TTGCTTGGTGTTAA--AA-TT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122688 68 -    149072 ACA---TTGA-A--A--AA-TCATC----CATT-AG-TT--C-A--CT-A-TC-T---TTT------A---T----TACTTTTCC--------TGTTTTGCTCAGTGTTAA--CA-TT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49346 66 -    132029 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-G------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5442 66 -     16345 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-G------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11325 66 +     22201 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-G------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409662 66 -  22158432 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-G------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21725 66 -     54323 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-G------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                193964 30 +   9404916 ata---tttt-a--a----atcatc----cATT-AA-TT--T-AC--A-G-TG-----------------------------------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 31
s Nycticebus_bengalensis.LG01                             93630522 59 + 196305487 -----------t--a-----aaaTG----CATT-TA-TT--T-ACTTA-T-TA-T---T-C------A---T----TGCTT-TCC--------TATTTTGCATGTTGTTCA--AA-TT
i Nycticebus_bengalensis.LG01                            N 0 I 322
s Nycticebus_coucang.k141_6036643                              864 59 -      1093 -----------t--a-----aaaTG----CATT-TA-TT--T-ACTTA-T-TA-T---T-C------A---T----TGCTT-TCC--------TATTTTGCATGTTGTTCA--AA-TT
i Nycticebus_coucang.k141_6036643                        N 0 N 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93558804 59 - 199412804 -----------t--a-----aaaTG----CATT-TA-TT--T-ACTTA-T-TA-T---T-C------A---T----TGCTT-TCC--------TATTTTGCATTTTGTTCA--AA-TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       N 0 I 319
s Odobenus_rosmarus.KB229312.1                             1447385 31 +   2017862 -----------------------------------------------------------------------T----TATTC-TCT--------TGTTTTGCTCAGTATTAA--AA-TT
i Odobenus_rosmarus.KB229312.1                           I 30 C 0
s Odocoileus_virginianus.KZ100018.1                         434528 66 -    630418 ACA---TTAT-T--GG----TCATC----CATT-AA-CT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TAT-TTGCTCAGTGTTAC--AA-TT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12516 66 +    150152 aca---tttt-t--g----gtcatc----catt-aa-tt--t-acat-gg-ta-t---t-t------g---t----tgctt-cct--------tat-ttgctcagtgttaa--aa-tt
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8094905 66 +  10937097 GTG---TTTT-T--AG----TCATC----CATT-AA-TT--T-ACAT--GGTA-T---T-T------G---T----TGCTT-CTC--------TAT-TTGCTTGGTGTTAA--AA-TC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35030 30 +    559221 ata---tttt-a--a----atcatc----CATT-AA-TT--T-AC--A-G-TG-----------------------------------------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 31
s Otolemur_crassicaudatus.k141_85057                         22058 59 -     23432 -----------t--a-----aaaCG----TATT-TA-TT--T-ACTTA-T-TA-T---T-C------A---T----TGGTT-TCC--------TATTTTGCATGTTGTTCA--AA-TT
i Otolemur_crassicaudatus.k141_85057                     N 0 I 310
s Otolemur_garnettii.GL873799.1                             346616 59 +   1103335 -----------t--a-----aaatg----tatt-ta-tt--t-actta-t-ta-t---t-c------a---t----TGCTT-TCC--------TATTTTGCATGTTGTTCA--AA-TT
i Otolemur_garnettii.GL873799.1                          N 0 I 317
s Ovis_aries.CM001607.2                                   26402505 66 -  44047080 ACA---TTTT-T--GG----TCATC----CCTT-AA-TT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-TCT--------TGT-TTGCTCAGTGTTAA--AA-TT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3024 66 +     17875 ACA---TTTT-T--GG----TCATC----CCTT-AA-TT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TGT-TTGCTCAGTGTTAA--AA-TT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467549 66 - 189151597 GTA---TTTT-T--A-----TGATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-G------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20238 67 -    230217 ATA---TTGT-A--A--A--TCATA----CATT-GA-TT--T-ACACA-G-TG-T---T-T------G---T----TATTC-TGC--------TGTTTGGCTTAGTGTTAA--AA-CT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18457564 67 -  18783137 ATA---TTGT-A--A--A--TCACA----CATT-GA-TA--T-ACACA-G-TG-T---T-T------G---T----TATTC-TGC--------TGTTTGGCTTAGTGTTAA--AA-Ct
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968293 67 +   8748460 ATA---TTGT-A--A--A--TCATA----CATT-GA-TA--T-ACACA-G-TG-T---T-T------G---T----TATTC-TGC--------TGTTTGGCTTAGTGTTAA--AA-Ct
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1613951 66 +   2937107 AAA---TTTT-T--GG----TCATC----CCTT-AA-TT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TGT-TTGCTCAGTGTTAA--AA-TT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   238963 66 - 183742232 gta---tttt-t--a-----taatt----tctt-ca-tt--t-acccA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5430 66 +     21308 GTA---TTTC-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286467 66 -  20919399 GTA---TTTT-T--A-----TAATT----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18083 66 -     27687 GTA---TTTC-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11219 66 +     16796 GTA---TTTT-T--A-----TAATT----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18029 66 -     23640 GTA---TTTT-T--A-----TAATT----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11154 68 +     78924 ATA---TTTT-A--A--A--TCATA----CATT-TACTT--T-ACACA-G-TG-T---T-T------G---T----TATTC-TAC--------TGTTTTGCTCATTATTAA--AA-TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          20599 59 +     31479 -----------t--a-----aaaTG----CATT-TA-TT--T-ACTTA-T-TA-T---T-C------A---T----TGCTT-TTC--------TATTTTGCATGTTGTTCA--AA-TT
i Perodicticus_ibeanus.k141_1921260                      N 0 I 333
s Perodicticus_potto.k141_1854441                            12975 59 -     24908 -----------t--a-----aaaTG----Catt-ta-tt--t-actta-t-ta-t---t-c------a---t----tgctt-ttc--------tatttTGCATGTTGTTCA--AA-TT
i Perodicticus_potto.k141_1854441                        N 0 I 328
s Phocoena_phocoena.PhoPho_flattened_line_46867              10763 66 -     15039 GTG---TTTT-T--AG----TCATC----CATT-AA-TT--T-ACAT--GGTG-T---C-T------G---T----TGCTT-CTC--------TAT-TTGCTTGGTGTTAA--AA-TT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4849 66 +      7560 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ATCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TCTTTTCTGCAGTGTTAA--AA-CT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60556 66 -     63152 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ATCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TCTTTTCTGCAGTGTTAA--AA-CT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43155 66 +     45295 GTA---TTTT-T--A-----TAATC----TCTT-CG-TT--T-ATCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TCTTTTCTGCAGTGTTAA--AA-CT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     834 66 +      5735 gta---tttt-t--a-----taatC----TCTT-CA-TT--T-ATCCA-G-GA-C---T-G------A---t----tactt-ctc--------tcttttctgcaGTGTTAA--AA-CT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45680 78 +     46691 ATA---TTTT-T--A--AA-TTATG----CATT-AG-TT--T-ACACA-G-TT-T---TTTTTTAAAA---T----TACTTTTAC--------TATTTTGCTCAGTGTTAAAATA-TT
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61037 65 +    207309 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G--C---T-G------G---T----GACTT-CTC--------TATTTCCCTCAGTGTTAA--AA-GT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2157 65 -     25401 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G--C---T-G------G---T----GACTT-CTC--------TATTTCCCTCAGTGTTAA--AA-GT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27872 65 +     58159 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G--C---T-G------G---T----GACTT-CTC--------TATTTCCCTCAGTGTTAA--AA-GT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28148 65 +     63561 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G--C---T-G------G---T----GACTT-CTC--------TATTTCCCTCAGTGTTAA--AA-GT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27911 65 +     51148 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G--C---T-G------G---T----GACTT-CTC--------TATTTCCCTCAGTGTTAA--AA-GT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552904 65 -   4542175 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G--C---T-G------G---T----GACTT-CTC--------TATTTCCCTCAGTGTTAA--AA-GT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27895 65 +     51125 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G--C---T-G------G---T----GACTT-CTC--------TATTTCCCTCAGTGTTAA--AA-GT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2847 66 -      8168 atg---tttt-t--a----gtcatc----catt-aa-tt--g-acat--ggtg-t---t-t------g---t----tgctt-ctc--------tat-atgctcggtgttaa--aa-tt
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4327 65 +     39866 GTA---TTTT-G--A-----TCATT----CATT-CA-TT--T-ACCCA-G-G-AC---T-C------C---T----TACTT-CTC--------TATTTCCCT-AGTGTTAA--AA-GT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38815 65 -     87950 GTA---TTTT-G--A-----TCATT----CATT-CA-TT--T-ACCCA-G-G-AC---T-C------C---T----TACTT-CTC--------TATTTCCCT-AGTGTTAA--AA-GT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39208 65 -     88961 GTA---TTTT-G--A-----TCATT----CATT-CA-TT--T-ACCCA-G-G-AC---T-C------C---T----TACTT-CTC--------TATTTCCCT-AGTGTTAA--AA-GT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3908 65 -     39403 GTA---TTTT-G--A-----TCATT----CATT-CA-TT--T-ACCCA-G-G-AC---T-C------C---T----TACTT-CTC--------TATTTCCCT-AGTGTTAA--AA-GT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38861 65 +     87928 GTA---TTTT-G--A-----TCATT----CATT-CA-TT--T-ATCCA-G-G-AC---T-C------C---T----TACTT-CTC--------TATTTCCCT-AGTGTTAA--AA-GT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3905 65 -     60166 GTA---TTTT-G--A-----TCATT----CATT-CA-TT--T-ACCCA-G-G-AC---T-C------C---T----TACTT-CTC--------TATTTCCCT-AGTGTTAA--AA-GT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10841 65 -     67232 GTA---TTTT-G--A-----TCATT----CATT-CA-TT--T-ACCCA-G-G-AC---T-C------C---T----TACTT-CTC--------TATTTCCCT-AGTGTTAA--AA-GT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38757 65 -     90634 GTA---TTTT-G--A-----TCATT----CATT-CA-TT--T-ACCCA-G-G-AC---T-C------C---T----TACTT-CTC--------TATTTCCCT-AGTGTTAA--AA-GT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40225 65 +     89403 GTA---TTTT-G--A-----TCATT----CATT-CA-TT--T-ACCCA-G-G-AC---T-C------C---T----TACTT-CTC--------TATTTCCCT-AGTGTTAA--AA-GT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173166 66 - 189387572 GTG---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-G------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188164 66 -   9816681 GTG---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-G------A---T----TACTT-CTC--------TATTTTCCGCTGTGTTAA--AA-CT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23335 66 +     69807 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40530 66 -     80239 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8070 31 +     14086 ----------------------------------------------------------------------------TACTG-TGC--------TATTTTGTGTAGTGTTAA--AAATG
i Procavia_capensis.ProCapCap_scaffold_121686            I 32 C 0
s Prolemur_simus.MPIZ01000396.1                            1979545 67 +   4620579 ata---tttt-t-aa-----taatg----catt-ta-tt--t-actCA-G-TA-T---T-C------A---T----TACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562127 67 -   2598838 ata---tttt-t-aa-----taatg----catt-ta-tt--t-actcA-G-TA-T---T-C------A---T----CACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79214 67 -     79582 ATA---TTTT-T-AA-----TAATG----CATT-TA-TT--T-ACTCA-G-TA-T---T-C------A---T----CACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              369 67 -     11706 ATA---TTTT-T-AA-----TAATG----CATT-TA-TT--T-ACTCA-G-TA-T---T-C------A---T----CACTT-ACC--------TATTTTGCATAGTGTTCA--AA-TT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4104 67 -     30655 ATA---TTTT-T-AA-----TAATG----TATT-TA-TT--T-ACTCA-G-TA-T---T-C------A---T----CACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30429 67 +     46564 ATA---TTTT-T-AA-----TAATG----CATT-TA-TT--T-ACTCA-G-TA-T---T-C------A---T----CACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90720 67 -     98465 ata---tttt-t-aa-----taatg----catt-ta-tt--t-actca-g-ta-t---t-c------a---t----cactt-atc--------tattttgcatagtgttca--aa-tt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4342 67 +     35169 ata---tttt-t-aa-----taatg----catt-ta-TT--T-ACTCA-G-TA-T---T-C------A---T----CACTT-ATC--------TATTTTGCATAGTGTTCA--AA-TT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47555 69 -     66298 ata---tttt-a--a---aattatc----catt-AG-TTTAC-A--CA-G-TC-T---TTG------A---T----TACTT-TCC--------TATTTTGCTCAGTGTTAA--AA-Tg
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4269 31 -     10349 -----------------------------------------------------------------------T----TAGTC-TTC--------TGTTTGGCTCAGTATTAA--AA-TT
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 32 C 0
s Pteropus_alecto.KB030862.1                               5836464 68 -  28871421 ata---tttt-a--a----actatc----cATT-AG-CT--TAACACA-A-TA-T---T-T------G---T----TGCTT-TTC--------TATTTTGCTCATTGTTAA--AC-TT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533040 67 -   4952924 ata---tttt-a--a----actatc----cATT-AG-CT--T-ACACA-A-TA-T---T-T------G---T----TGCTT-TTC--------TATTTTGCTCACTGTTAA--AC-TT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095116 67 +  38429054 ATA---TTGT-A--A--A--TCATA----CATT-GA-TT--T-ACACA-G-TG-T---T-T------G---T----TATTC-TGC--------TGTTTGGCTTCGTGTTAA--AA-Ct
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51485 66 +     55069 ACA---TTAT-T--GG----TCATC----CATT-AA-CT--T-ACAT-GG-TA-T---T-T------G---T----TGCTT-CCT--------TAT-TTGCTCAGCGTTAA--AA-TT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909115 67 +   3329780 ata---tttt-t--a----accaTT----CATT-AG-CT--T-ACACA-G-TA-C---T-T------G---T----TACTT-TCC--------TATTTTGCTCAGTGTTAA--at-tt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24553 66 +     27361 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTTCAGTGTTAA--AA-CT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117912 66 + 195417433 gta---tttt-t--a-----taaTC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232161 66 -   7961872 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTTCAGTGTTAA--AA-CT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70511 67 -    116970 ATA---TTTT-A--A--A--CTATT----CATT-AG-CT--T-ACACA-A-TA-T---T-T------G---T----TGCTT-TTC--------TATTTTGCTCAGTGTTAA--AC-TC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1125626                              16553 69 +     16959 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------GGAAT----TACTT-CTC--------CATTTGCCTGAGTGTTAA--AA-GT
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38403 69 +     72255 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------GGAAT----TACTT-CTC--------CATTTGCCTGAGTGTTAA--AA-GT
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            11044 69 +     11432 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------AGAAT----TACTT-CTC--------CATTTGCCTGAGTGTTAA--AA-GT
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16418 69 -     16755 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------GGAAT----TACTT-CTC--------CATTTGCCTGAGTGTTAA--AA-GT
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             14989 69 -     15289 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------GGAAT----TACTT-CTC--------CATTTGCCTGAGTGTTAA--AA-GT
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       386985 69 - 209938924 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------GGAAT----TACTT-CTC--------CATTTGCCTGAGTGTTAA--AA-GT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7849 69 +     22212 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------GGAAT----TACTT-CTC--------CATTTGCCTGAGTGTTAA--AA-GT
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16347 69 +     39756 GTA---TTTT-G--A-----TAATT----TATT-CA-TT--T-ACCCA-G-G-AC---T-C------GGAAT----TACTT-CTC--------CATTTGCCTGAGTCTTAA--AA-GT
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6091 66 +     16473 ACA---TTTT-T--GG----CCATC----CCTT-AA-TT--T-ATAG-GG-TA-T---T-T------G---T----TGCTT-CCT--------TGT-TTGCTCAGTGTTAA--AA-TC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234535 66 +   5703754 GTA---TTTT-G--A-----TAATT----TATT-CA-TC--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TGTTTCCCTCAGTGTTAA--AG-GC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4125 66 +     21866 GTA---TTTT-G--A-----TAATT----TATT-CA-TC--T-ACCCA-G-G-AC---T-C------G---T----TACTT-CTC--------TGTTTCCCTCAGTGTTAA--AG-GC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112031 34 +    313613 ATG---TCTT-A--AG----TCATC----CATT-TA-TT--T-ACCCA-G-TA-C---T-----------------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 34
s Semnopithecus_entellus.k141_158471                         21043 66 +     27374 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24558 66 +     58920 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11055 66 -     45317 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18712 66 -     42441 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21394 66 -     29113 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24466 66 -     48123 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854252 30 -   1910179 ----------------------------------------------------------------------------TACTT-CCC--------TATTTTGCTCTGTGTTAA--AA-TG
i Solenodon_paradoxus.SolPar_flattened_line_126          I 34 C 0
s Spermophilus_dauricus.KZ294078.1                         1855404 44 +   3870691 -----------------------------------------t-actca-a-ta-t---t-t------a---t----tattt-ctc--------tattttgtatAGTATTAA--AA-TT
i Spermophilus_dauricus.KZ294078.1                       I 217 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              2129 31 -     97271 -----------------------------------------------------------------------T----TATTC-TCC--------TGTTTTGCTCAGTATTAA--AA-TT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 29 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120783 67 +    196729 ATA---TTTT-A--A--A--TCATA----CATT-GA-TT--T-ACACA-G-TG-T---T-T------G---T----TATTC-TGC--------AGTTTTGCTCAGTGTTAA--AA-TT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6639506 66 +  69701581 ata---tttt-t--a----atcatg----CATT-AG-TT--T-ACAC-AG-GA-C---T-T------G---T----TACTT-CCC--------TGT-TTGCTCAGGGTAAA--AA-TT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386638 66 +   1523678 GTA---TTTT-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-G---T-G------A---T----TACTT-CTC--------TGTTTTCCGCTGTGTTAA--AA-CT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                24665 26 -     25844 --------------------------------------------------------------------------------T-CTC--------TACTTTGCTCAGTGTTAA--AA-TT
i Tamandua_tetradactyla.TamTet_scaffold_67439            I 21 I 4
s Tapirus_indicus.TapInd_scaffold_7432                      187290 68 +    199430 ata---tttt-t--a----attatc----catttca-tt--t-acaca-g-ta-t---t-t------g---t----tttgt-cac--------tattttgatcagtgttaa--aa-tt
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101245 68 -    539355 ATA---TTTT-T--A--A--TTATC----CATTTCA-TT--T-ACACA-G-TA-T---T-T------G---T----TTTGT-CAC--------TATTTTGATCAGTGTTAA--AA-TT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                3001 68 +      6850 ATA---TTTTAA--A--A--TAATC----CATT-CA-TT--C-TCTTG-C-TA-T---T-T------G---T----TACTT-TTC--------AGTTTCGCAAAGTGTTAA--AA-TC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3085 68 +     20590 ATA---TTTTAA--A--A--TAATC----CATT-CA-TT--C-TCTTG-C-TA-T---T-T------G---T----TACTT-TTC--------AGTTTCGCAAAGTGTTAA--AA-TC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           348948 66 - 186847797 GTA---TTTC-T--A-----TAATC----TCTT-CA-TT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                    9734 22 -     31044 ATA---TTTT-T--A--A--TAATC----CATT-TA-T--------------------------------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 14
s Tonatia_saurophila.TonSau_scaffold_294                    475342 69 -    610378 ATA---TTTT-A--A--AA-TTAGC----CATT-AG-TTTAT-A--CA-G-TC-T---TTT------A---T----TACTT-GCC--------TATTTTGCTCAGTGTTAA--CA-TT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16607 66 +     26378 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29288 66 -     78344 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15928 66 +     25722 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24151 66 -     62838 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24270 66 +     46913 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5078 66 -     28527 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26090 66 -     64340 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24127 66 -     63452 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5569 66 +     22490 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3189 66 +      4141 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         5995 66 -     13050 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251231 66 -   6242583 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       56964 66 +     59866 GTA---TTTT-T--A-----TAATC----TCTT-CA-CT--T-ACCCA-G-GA-C---T-G------A---T----TACTT-CTC--------TATTTTCTGCAGTGTTAA--AA-CT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478702 29 -  10818551 --------------a----ataatc----catt-ct-tt--t-tctca-g-ta-tttgt-----------------------------------------------------------
i Trichechus_manatus.JH594705.1                          I 7 I 30
s Tupaia_chinensis.KB320699.1                              1825802 67 -   4065304 tta---ttta-a--a----ataacc----taTG-TA-TT--T-ACTCA-G-TA-T---T-T------A---T----TCCTT-ATC--------TATATGGTATAGTATTAA--AA-TT
i Tupaia_chinensis.KB320699.1                            I 239 I 208
s Tupaia_tana.TupTan_flattened_line_394                       3205 67 -     70247 TTA---TTTA-A--A--A--TAACC----TATG-CA-TT--T-ACTCA-G-TA-T---T-T------A---T----TACTT-CTC--------TATATGGTATAGTATTAA--AA-TT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359644 66 -  33153633 gtg---tttt-t--a----gtcatc----catt-aa-tt--t-acat--ggta-t---t-t------g---t----tgctt-ctc--------tat-ttgcttggtgttaa--aa-tt
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103449 33 -    105689 AT----TTTT-A--A--A--CCATC----CATT-TA-TT--T-ACACA-C-TA-T---T-----------------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 34
s Ursus_maritimus.KK499267.1                                177313 32 +   5085361 ata---tttt-t--a----attatc----caTT-AA-TT--T-ACGTA-G-TG-----------------------------------------------------------------
i Ursus_maritimus.KK499267.1                             C 0 I 31
s Varecia_rubra.k141_787544                                  21175 67 -     30710 ata---tttt-t-aa-----taatg----catt-ta-tt--t-actca-g-ta-t---t-c------a---t----tactt-atc--------tattttgcatagtgttta--aa-tt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20083 67 -    147434 ATA---TTTT-T-AA-----TAATG----CATT-TA-TT--T-ACTCA-G-TA-T---T-C------A---T----TACTT-ATC--------TATTTTGCATAGTGTTTA--AA-TT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74728 67 +   5488506 cta---tttc-c--a----gccata----catt-aa-tt--t-acaca-g-tg-t---t-t------a---t----tactt-ccc--------tgttttgctaaatgttaa--aa-gg
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100710 30 -    112863 ATA---TTTT-A--A--A--TCATC----CATT-AA-TT--T-AC--A-G-TG-----------------------------------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 31
s Xerus_inauris.XerIna_scaffold_2302                        162314 48 -    224448 -----------------------------------------T-ACTCA-G-TA-T---T-T------A---TTTGTTACTT-CTC--------TATTTTGTGTAGTGTTAA--AA-TT
i Xerus_inauris.XerIna_scaffold_2302                     I 19 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24604 31 -     86975 -----------------------------------------------------------------------T----TATTC-TCT--------TGTTTTGCTCAGTATTAA--AA-TT
i Zalophus_californianus.ZalCal_flattened_line_17732     I 30 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2431392            140 66 +       382 gtg---tttt-t--a----gtcatc----catt-aa-tt--t-acat--ggtg-t---t-t------g---t----tgctt-ctc--------tat-ttgctcggtgttaa--aa-tt
i Ziphius_cavirostris.ZipCav_flattened_line_2431392      N 0 C 0
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        375 6 +     36723 AG-GTG---T
s Acinonyx_jubatus.LLWD01001279.1                           808928 3 +   1699592 at-g------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 6
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410693 3 +  29979442 ag-g------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 31 I 7
s Ailurus_fulgens.LNAC01001112.1                            211610 3 +    347723 ag-g------
i Ailurus_fulgens.LNAC01001112.1                         I 31 I 6
s Allenopithecus_nigroviridis.k141_3755588                   43686 6 +     53615 AG-GTA---T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39501 6 +     44087 AG-GTG---T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68424 6 -     84148 AG-GTG---T
i Alouatta_belzebul.k141_1011583                         C 0 I 7
s Alouatta_caraya.k141_1109140                               40647 6 -     78289 AG-GTG---T
i Alouatta_caraya.k141_1109140                           C 0 I 7
s Alouatta_discolor.k141_2561099                             40095 6 +     55831 AG-GTG---T
i Alouatta_discolor.k141_2561099                         C 0 I 7
s Alouatta_juara.k141_1687208                                38536 6 -     64179 AG-GTG---T
i Alouatta_juara.k141_1687208                            C 0 I 7
s Alouatta_macconnelli.k141_361275                           20179 6 -     24835 AG-GTG---T
i Alouatta_macconnelli.k141_361275                       C 0 I 7
s Alouatta_nigerrima.k141_376068                             37162 6 +     45454 AG-GTG---T
i Alouatta_nigerrima.k141_376068                         C 0 I 7
s Alouatta_palliata.k141_638677                              42861 6 +     70886 AG-GTG---T
i Alouatta_palliata.k141_638677                          C 0 I 7
s Alouatta_puruensis.k141_251022                              4988 6 +     30854 AG-GTG---T
i Alouatta_puruensis.k141_251022                         C 0 I 7
s Alouatta_seniculus.k141_928287                             29127 6 +     42133 AG-GTG---T
i Alouatta_seniculus.k141_928287                         C 0 I 7
s Ammotragus_lervia.NIVO01071767.1                         1583636 6 +   2318259 AG-GTG---A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172366 6 -    412891 AA-CTT---T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48732 6 -     68529 AG-GTG---C
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46932 6 -     65372 AG-GTG---T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40680 6 +     43593 AG-GTG---T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668690 6 +   5030052 ag-gtg---t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20332 6 -     23494 AG-GTG---T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5468 6 +      8415 AG-GTG---T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11692 6 -     32367 AG-GTA---T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       15569 6 -     45910 AG-GTG---T
i Arctocebus_calabarensis.k141_1364444                   I 336 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   230 6 -     15198 AA-CCT---T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270922 6 +  21539123 AG-GTG---T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 7
s Ateles_belzebuth.k141_1572163                               7093 6 +     48076 AG-GTG---T
i Ateles_belzebuth.k141_1572163                          C 0 I 7
s Ateles_chamek.k141_615173                                   2227 6 -     28759 AG-GTG---T
i Ateles_chamek.k141_615173                              C 0 I 7
s Ateles_geoffroyi_a.k141_1283730                              29779 6 +     44353 AG-GTG---T
i Ateles_geoffroyi_a.k141_1283730                          C 0 I 7
s Ateles_marginatus.k141_970259                              45154 6 -     71267 AG-GTG---T
i Ateles_marginatus.k141_970259                          C 0 I 7
s Ateles_paniscus.k141_866194                                19210 6 -     33135 AG-GTG---T
i Ateles_paniscus.k141_866194                            C 0 I 7
s Avahi_laniger.k141_2756659                                  2329 6 +     11645 AG-GCA---T
i Avahi_laniger.k141_2756659                             C 0 I 5
s Avahi_peyrierasi.k141_1823318                               2331 6 -     19611 AG-GCA---T
i Avahi_peyrierasi.k141_1823318                          C 0 I 5
s Balaenoptera_acutorostrata.KI537508.1                    7955461 6 -  23207421 ag-gtg---c
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2669 6 -      4711 ag-gtg---c
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84630 6 +    124022 AG-GTG---C
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20161 6 +    288883 AG-GTG---c
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354548 6 +  48749331 AG-GTG---C
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753116 6 +   1948126 AG-Gtg---c
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543255 6 -  45695690 AG-GTG---C
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528277 6 -   4408762 AG-GTg---c
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   4113 5 +     28062 AG-GTG----
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39408 5 -     91139 AG-GTG----
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16933 5 +     95584 AG-GTG----
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16846 5 +    119600 AG-GTG----
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              6039 6 -     13885 CG-GTG---T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14725 6 +     17162 TG-GTG---T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449681 6 + 189096842 CG-GTG---T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15974 6 -     18408 CG-GTG---T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629457 6 +  17673402 AG-ATG---T
i Camelus_bactrianus.KN276810.1                          C 0 I 9
s Camelus_dromedarius.KN272107.1                           4663743 6 +   7040546 AG-ATG---T
i Camelus_dromedarius.KN272107.1                         C 0 I 9
s Camelus_ferus.KB017975.1                                 1207403 6 +   1652518 AG-ATG---T
i Camelus_ferus.KB017975.1                               C 0 I 9
s CanFam4.chr16                                           42501138 3 +  60362399 AG-G------
i CanFam4.chr16                                          I 31 I 6
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4768 3 -     23171 AG-G------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 31 I 6
s Canis_lupus_dingo.QKWQ01000480.1                          218129 3 +   9314153 AG-G------
i Canis_lupus_dingo.QKWQ01000480.1                       I 31 I 6
s Canis_lupus_familiaris.chr16                            41611254 3 +  59632846 AG-G------
i Canis_lupus_familiaris.chr16                           I 31 I 6
s Canis_lupus_orion.HG994398.1                            45102824 3 -  63665305 AG-G------
i Canis_lupus_orion.HG994398.1                           I 31 I 6
s Capra_aegagrus.CM003241.1                               27407347 6 -  46296322 AG-gtg---c
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589620 6 +  44709034 AG-gtg---c
i Capra_hircus.CM004588.1                                C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                272 6 +      5315 AA-CTT---T
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75107 6 -    217609 AG-GTG---T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1259 6 -     12580 CA-GTG---T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39145 6 +     53515 CA-GTG---T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367377 6 -  26074798 AG-GTG---T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4266 6 -     34880 AG-GTG---T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63361 6 -     89041 AG-GTG---T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13736 6 -     50533 AG-GTG---T
i Cephalopachus_bancanus.k141_1275952                    C 0 I 6
s Ceratotherium_simum.JH767749.1                          15488336 6 -  27778364 ag-gtg---t
i Ceratotherium_simum.JH767749.1                         C 0 I 6
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15169 6 +     27315 AG-GTG---T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 6
s Cercocebus_atys.KQ010504.1                                136846 6 -   4669795 AG-gtg---t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40587 6 +     47900 AG-GTG---T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40419 6 -     44860 AG-GTG---T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40401 6 -    148725 AG-GTG---T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23387 6 -     40656 AG-GTG---T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3395 6 +     20796 AG-GTA---T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7650 6 -     17524 AG-GTG---T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23342 6 -     34525 AG-GTG---T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8062 6 -     25376 AG-GTG---T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360539 6 -  39242232 AG-GTG---T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266367 6 +  21565898 AG-GTG---T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27813 6 -     45857 AG-GTG---T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23604 6 -     32606 AG-GTG---T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27253 6 +     27662 AG-GTG---T
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21303 6 +     70610 AG-GTG---T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18168 6 +     36323 AG-GTG---T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             2775 2 -     19938 -----G---T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             26750 6 -     33796 AG-GCA---T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              945 6 -     15404 AG-GCA---T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5210 5 -     32913 AG-GTG----
i Cheracebus_lucifer.k141_2312002                        C 0 I 1
s Cheracebus_lugens.k141_1179667                             15623 5 -     40346 AG-GTG----
i Cheracebus_lugens.k141_1179667                         C 0 I 1
s Cheracebus_regulus.k141_471822                             15887 5 +    216457 AG-GTG----
i Cheracebus_regulus.k141_471822                         C 0 I 1
s Cheracebus_torquatus.k141_890198                           15666 5 +     39636 AG-GTG----
i Cheracebus_torquatus.k141_890198                       C 0 I 1
s Chiropotes_albinasus.k141_2737257                          16719 5 -     17061 CG-GTG----
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38752 5 -    112038 AG-GTG----
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4324 5 +     34062 AG-GTG----
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339066 6 +  18827391 AG-GTG---T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5670 6 -     44032 AG-GTG---T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300392 6 - 135778131 AG-gtg---t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                  9587 2 +     15858 -----G---T
i Choloepus_didactylus.ChoDid_scaffold_70559             I 4 C 0
s Choloepus_hoffmanni.KN194906.1                            601163 2 -    839153 -----g---t
i Choloepus_hoffmanni.KN194906.1                         I 4 C 0
s Colobus_angolensis.KN981557.1                             404923 6 -   2368649 Ag-gtg---t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374113 6 - 200372422 AG-GTG---T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4807 6 -      6605 AG-GTG---T
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803021 6 +  53390261 tt-taa---t
i Condylura_cristata.JH655891.1                          I 39 I 213
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8630 9 +     10921 AG-GAGTTTT
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 I 15
s Dasypus_novemcinctus.JH564415.1                          2087839 2 -   2246927 -----G---T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               168 2 +     87169 AG--------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 6
s Daubentonia_madagascariensis.ctg71                        288768 6 +  12879189 AG-GTA---T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623789 6 -  35494412 AG-GTG---T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660623 6 -   1390856 AG-Gcg---t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 6
s Diceros_bicornis.DicBicMic_scaffold_5955                  135415 6 -    198055 AG-GTG---T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 6
s Eidolon_helvum.AWHC01266696.1                               1987 9 +     19438 AG-GTATCTT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238023 6 -    607251 AG-ATG---C
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906149 3 +  41312741 ag-g------
i Enhydra_lutris.KZ291758.1                              I 31 I 6
s Eptesicus_fuscus.JH977646.1                             12573564 6 +  14770903 aggttc----
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037580 6 -   4378816 ag-gtg---t
i Equus_asinus.JREZ01000139.1                            C 0 I 6
s Equus_caballus.CM000403.2                               21371514 6 +  39960074 ag-gtg---t
i Equus_caballus.CM000403.2                              C 0 I 6
s Equus_przewalskii.KK951119.1                              408300 6 -    498745 ag-gtg---t
i Equus_przewalskii.KK951119.1                           C 0 I 6
s Erythrocebus_patas.Contig38                               258622 6 +  21539334 AG-GTG---T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63340 6 -    133382 ag-gtg---t
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3556 6 +      7672 ag-gtg---t
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11729 6 -     24895 ag-gca---t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39441 6 -     70999 ag-gca---t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83401 6 +    112731 ag-gca---t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39973 6 +     68309 ag-gca---t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50298 6 -     65740 AG-GCA---T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20928 6 -     75513 AG-GCA---T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45121 6 -     97555 AG-GCA---T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1848 6 +     30972 AG-GCA---T
i Eulemur_rubriventer.k141_1423786                       C 0 I 2
s Eulemur_rufus.k141_514691                                  39571 6 -     52037 ag-gca---t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55972 6 -    111500 ag-gca---t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242587 3 - 206538554 AG-G------
i Felis_catus.CM001381.2                                 C 0 I 6
s Felis_catus_fca126.CM031415.1                          185112369 3 - 205367284 AG-G------
i Felis_catus_fca126.CM031415.1                          C 0 I 6
s Felis_nigripes.FelNig_flattened_line_31944                 23717 3 -     30238 AG-G------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 6
s Galago_moholi.ctg3793                                     119151 6 -    137831 AG-GTG---T
i Galago_moholi.ctg3793                                  I 308 C 0
s Galago_senegalensis.k141_991736                             2691 6 +     22493 AG-GTG---T
i Galago_senegalensis.k141_991736                        I 313 C 0
s Galagoides_demidoff.k141_561628                            14884 6 -     32986 AG-GTG---T
i Galagoides_demidoff.k141_561628                        I 307 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14929 6 +     18121 AG-GTG---T
i Galeopterus_variegatus.GalVar_scaffold_74466           I 65 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89698 6 -     95226 AG-Gtg---c
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 30 C 0
s Gorilla_beringei.k141_3358224                                733 6 -      1229 AG-GTG---T
i Gorilla_beringei.k141_3358224                          C 0 I 18
s Gorilla_gorilla.LT578341.1                                250227 6 - 186649187 AG-gtg---t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11662 6 -     40692 AG-GCA---T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33064 6 +     49394 ag-gca---t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57932 6 -     66874 ag-gca---t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6809 6 -     42923 AG-GCA---T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13805 6 -     53142 AG-GCA---T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26482 3 -    327341 AG-G------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 6
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7451 6 +     48891 AG-GTG---A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10944 6 +     12639 AC-CTA---T
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6040 6 -     36432 ag-gtg---t
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545877 9 -   1711038 Ag-gtattcc
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45167 9 +     49977 ag-gtattct
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 34
s Hoolock_leuconedys.ctg274                                    138127 6 -    630532 AG-GTG---T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  64651 3 +     83186 AG-G------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 6
s Hylobates_agilis.k141_1155965                               1155 6 +     12352 AG-GTG---T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8338 6 +     55766 AG-GTG---T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047682 6 + 191637585 AG-GTG---T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797014 6 +  11177569 AG-GTG---T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375071 6 +   7955117 AG-GTA---T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2435083                                    1009 6 +      1070 AG-ACA---T
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1576 6 -     16823 ag-gtg---t
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64073 6 -     97402 AG-GTG---T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39469 6 +    110728 AG-GTG---T
i Lagothrix_lagothricha.k141_246028                      C 0 I 7
s Lasiurus_borealis.LasBor_scaffold_16567                    59074 6 -     65777 AGGCTT----
i Lasiurus_borealis.LasBor_scaffold_16567                I 72 C 0
s Lemur_catta.scaffold_24                                 14756454 6 +  30322482 ag-gca---t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        5130 6 -      5330 TG-GTG---T
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16568 6 -     16762 TG-GTG---T
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16866 6 -     17065 CG-GTG---T
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6388 6 -     11567 CG-GTG---T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7769 6 -     12945 CG-GTG---T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5108 6 +     29618 AG-GCA---T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5107 6 +     31569 AG-GCA---T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5114 5 +     24756 AG--CA---T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5112 6 +     16388 AG-GCA---T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809234 3 -   3914936 AG-G------
i Leptonychotes_weddellii.KB714746.1                     I 31 I 6
s Lipotes_vexillifer.KE559953.1                             333099 6 +    662738 ag-gtg---t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328802 6 -   1826925 AG-GTG---T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2129 6 +     19643 AG-GTG---T
i Loris_lydekkerianus.k141_2031736                       I 323 C 0
s Loris_tardigradus.ctg83                                  5035787 6 -   6120653 AG-GTG---T
i Loris_tardigradus.ctg83                                I 322 C 0
s Loxodonta_africana.GL010049.1                           39076111 1 +  43346337 ---------t
i Loxodonta_africana.GL010049.1                          I 28 C 0
s Lycaon_pictus.CM007581.1                                41610409 3 +  59628241 AG-G------
i Lycaon_pictus.CM007581.1                               I 31 I 6
s Macaca_arctoides.k141_1757516                              41083 6 -     61512 AG-GTG---T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368711 6 -  60120075 AG-GTG---T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21030 6 +     30207 AG-GTG---T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18133 6 -     24934 AG-GTG---T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20917 6 +     30527 AG-GTG---T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32106 6 -     50087 AG-GTG---T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41844 6 +     51645 AG-GTG---T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410418 6 - 187317192 AG-gtg---t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395301 6 +  25927173 Ag-gtg---t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44433 6 -     62418 AG-GTG---T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21120 6 +     24253 AG-GTG---T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40877 6 +     59329 AG-GTG---T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266709 6 +    668171 AG-GTG---T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18055 6 +     21031 AG-GTG---T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31787 6 +     33478 AG-GTG---T
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219059 9 -    270270 AG-GTATCTT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318185 6 +  24302211 AG-GTG---T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353017 6 -    752769 AG-GTG---T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669798 6 -    737560 AG-Gtg---t
i Manis_javanica.JSZB01003497.1                          C 0 I 6
s Manis_pentadactyla.KN006162.1                             217092 6 +    317179 ag-gtg---t
i Manis_pentadactyla.KN006162.1                          C 0 I 6
s Marmota_marmota.CZRN01000018.1                           7489164 6 +  40650429 AG-GTA---C
i Marmota_marmota.CZRN01000018.1                         C 0 I 6
s Megaderma_lyra.MegLyr_scaffold_4542                       146136 9 +    207569 AG-GTTTTTT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 8
s Mellivora_capensis.MelCap_flattened_line_19308             14161 3 -     74585 AG-G------
i Mellivora_capensis.MelCap_flattened_line_19308         I 31 I 6
s Mesoplodon_bidens.MesBid_scaffold_6114                     79643 6 +     93471 ag-gtg---t
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 13
s Mico_argentatus.k141_582562                                 6147 6 +     17804 CG-GTG---T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6920 6 -     12984 CA-GTG---T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14882 6 -     26561 CG-GTG---T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980713 6 +  93316391 Ag-gca---t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180373 6 +    200668 AG-CCT---T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 7
s Miopithecus_ogouensis.k141_1534655                         18096 6 -     27822 AG-GTG---T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4250 3 +     27589 ag-G------
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 31 I 6
s Mirza_zaza.k141_766280                                     48574 6 -     62432 AG-GCC---T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351532 6 +    437263 AG-GTG---T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174544 6 +    366855 AG-CCT---T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22603 6 -     82753 AG-GTG---C
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14251 3 -     63510 AG-A------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 6
s Murina_feae.MurFea_scaffold_17764                          33473 6 +     47283 AGGTTC----
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343205 3 +  14710649 ag-g------
i Mustela_putorius.JH418006.1                            I 31 I 6
s Myotis_brandtii.KE162005.1                               9787925 6 +  10118263 AGCCCC----
i Myotis_brandtii.KE162005.1                             C 0 I 8
s Myotis_davidii.KB100139.1                                4378312 6 +   6019432 aggctc----
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18555 6 -     39439 AGCCCC----
i Myotis_lucifugus.GL432175.1                            C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_185951                        1869 6 +      3929 AGGCTC----
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 I 7
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              109743 2 +    130748 -----G---G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 4 C 0
s Nasalis_larvatus.k141_1350636                              24461 6 +     34575 AG-GTG---T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464646 3 -  31847680 AG-G------
i Neomonachus_schauinslandi.NINY01007730.1               I 31 I 6
s Neophocaena_asiaeorientalis.KZ687982.1                   1225701 6 -   7148211 AG-GTG---T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122756 6 -    149072 AG-CCC---C
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49412 6 -    132029 GG-GTG---T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5508 6 -     16345 GG-GTG---T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11391 6 +     22201 GG-GTC---T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409728 6 -  22158432 GG-GTG---T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21791 6 -     54323 GG-GTG---T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194025 3 +   9404916 AG-C------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 31 I 6
s Nycticebus_bengalensis.LG01                             93630903 5 + 196305487 A--GTG---T
i Nycticebus_bengalensis.LG01                            I 322 C 0
s Nycticebus_coucang.k141_8166032                              292 5 +      2758 a--gtg---t
i Nycticebus_coucang.k141_8166032                        N 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559182 6 - 199412804 AG-GTG---T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 319 C 0
s Odobenus_rosmarus.KB229312.1                             1447416 3 +   2017862 AG-G------
i Odobenus_rosmarus.KB229312.1                           C 0 I 6
s Odocoileus_virginianus.KZ100018.1                         434594 6 -    630418 AG-GTG---C
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12582 6 +    150152 ag-gtg---c
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8094971 6 +  10937097 AG-GTG---T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35091 3 +    559221 AG-G------
i Otocyon_megalotis.JAEUCK010005147.1                    I 31 I 6
s Otolemur_crassicaudatus.k141_85057                         22427 6 -     23432 AG-GTG---T
i Otolemur_crassicaudatus.k141_85057                     I 310 C 0
s Otolemur_garnettii.GL873799.1                             346992 6 +   1103335 ag-GTG---T
i Otolemur_garnettii.GL873799.1                          I 317 C 0
s Ovis_aries.CM001607.2                                   26402571 6 -  44047080 AG-GTG---A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3090 6 +     17875 AG-GTG---A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467615 6 - 189151597 Ag-gtg---t
i Pan_troglodytes.CM009242.2                             C 0 I 18
s Panthera_onca.PanOnc_flattened_line_3271                   20305 3 -    230217 AG-G------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 6
s Panthera_pardus.KV860321.1                              18457631 3 -  18783137 ag-g------
i Panthera_pardus.KV860321.1                             C 0 I 6
s Panthera_tigris.KE722367.1                               3968360 3 +   8748460 ag-g------
i Panthera_tigris.KE722367.1                             C 0 I 6
s Pantholops_hodgsonii.KE114653.1                          1614017 6 +   2937107 AG-gtg---c
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   239029 6 - 183742232 AG-gtg---t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5496 6 +     21308 AG-GTG---T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286533 6 -  20919399 AG-GTG---T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18149 6 -     27687 AG-GTG---T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11285 6 +     16796 AG-GTG---T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18095 6 -     23640 AG-GTG---T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11222 3 +     78924 AG-G------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 6
s Perodicticus_ibeanus.k141_1921260                          20991 6 +     31479 AG-GTG---T
i Perodicticus_ibeanus.k141_1921260                      I 333 C 0
s Perodicticus_potto.k141_1854441                            13362 6 -     24908 AG-GTG---T
i Perodicticus_potto.k141_1854441                        I 328 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10829 6 -     15039 AG-GTG---T
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4915 6 +      7560 AG-GTA---T
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60622 6 -     63152 AG-GTA---T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43221 6 +     45295 AG-GTA---T
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     900 6 +      5735 AG-GTA---T
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45758 6 +     46691 AGGCTC----
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61102 5 +    207309 AG-GTG----
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2222 5 -     25401 AG-GTG----
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27937 5 +     58159 AG-GTG----
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28213 5 +     63561 AG-GTG----
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27976 5 +     51148 AG-GTG----
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552969 5 -   4542175 AG-GTG----
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27960 5 +     51125 AG-GTG----
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2913 6 -      8168 ag-gtg---t
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4392 5 +     39866 AG-GTG----
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 1
s Plecturocebus_caligatus.k141_1382851                       38880 5 -     87950 AG-GTG----
i Plecturocebus_caligatus.k141_1382851                   C 0 I 1
s Plecturocebus_cinerascens.k141_1164729                     39273 5 -     88961 AG-GTG----
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 1
s Plecturocebus_cupreus.k141_2351393                          3973 5 -     39403 AG-GTG----
i Plecturocebus_cupreus.k141_2351393                     C 0 I 1
s Plecturocebus_dubius.k141_1058799                          38926 5 +     87928 AG-GTG----
i Plecturocebus_dubius.k141_1058799                      C 0 I 1
s Plecturocebus_grovesi.k141_2013005                          3970 5 -     60166 AG-GTG----
i Plecturocebus_grovesi.k141_2013005                     C 0 I 1
s Plecturocebus_hoffmannsi.k141_3303950                      10906 5 -     67232 AG-GTG----
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 1
s Plecturocebus_miltoni.k141_349282                          38822 5 -     90634 AG-GTG----
i Plecturocebus_miltoni.k141_349282                      C 0 I 1
s Plecturocebus_moloch.k141_1031110                          40290 5 +     89403 AG-GTG----
i Plecturocebus_moloch.k141_1031110                      C 0 I 1
s Pongo_abelii.CM009266.2                                   173232 6 - 189387572 AG-GTG---T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188230 6 -   9816681 AG-GTG---T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23401 6 +     69807 AG-GTG---T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40596 6 -     80239 AG-GTG---T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8101 6 +     14086 AC-CTA---T
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979612 6 +   4620579 AG-gca---t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562194 6 -   2598838 AG-gca---t
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 5
s Propithecus_coronatus.k141_149744                          79281 6 -     79582 AG-GCA---T
i Propithecus_coronatus.k141_149744                      C 0 I 5
s Propithecus_diadema.k141_153680                              436 6 -     11706 AG-GCA---T
i Propithecus_diadema.k141_153680                        C 0 I 5
s Propithecus_edwardsi.k141_635656                            4171 6 -     30655 AG-ACA---T
i Propithecus_edwardsi.k141_635656                       C 0 I 5
s Propithecus_perrieri.k141_1496898                          30496 6 +     46564 AG-GCA---T
i Propithecus_perrieri.k141_1496898                      C 0 I 5
s Propithecus_tattersalli.k141_1127767                       90787 6 -     98465 ag-gca---t
i Propithecus_tattersalli.k141_1127767                   C 0 I 5
s Propithecus_verreauxi.k141_1047036                          4409 6 +     35169 AG-GCA---T
i Propithecus_verreauxi.k141_1047036                     C 0 I 5
s Pteronotus_parnellii.KE847780.1                            47624 6 -     66298 ag-cct---t
i Pteronotus_parnellii.KE847780.1                        C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4300 3 -     10349 AG-G------
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 I 6
s Pteropus_alecto.KB030862.1                               5836532 9 -  28871421 AG-GTATCTT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533107 9 -   4952924 AG-GTATCTT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095183 3 +  38429054 ag-g------
i Puma_concolor.QAVW01001104.1                           C 0 I 6
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51551 6 +     55069 AG-GTG---C
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 7
s Rhinolophus_sinicus.LVEH01000134.1                       2909182 9 +   3329780 ag-gtatttt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 7
s Rhinopithecus_bieti.k119_221883                            24619 6 +     27361 AG-GTG---T
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117978 6 + 195417433 AG-GTG---T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232227 6 -   7961872 AG-GTG---T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70578 9 -    116970 AG-GTATCTT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 5
s Saguinus_bicolor.k141_1125626                              16622 6 +     16959 CG-GTG---T
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38472 6 +     72255 CG-GTG---T
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            11113 6 +     11432 CG-GTG---T
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16487 6 -     16755 CG-GTG---T
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             15058 6 -     15289 CG-GTG---T
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       387054 6 - 209938924 CG-GTG---T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7918 6 +     22212 CG-GTG---T
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16416 6 +     39756 CG-GTG---T
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6157 6 +     16473 AG-GTG---C
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234601 6 +   5703754 AG-GTG---T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4191 6 +     21866 AG-GTG---T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112099 5 +    313613 ATG--G---T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 34 I 191
s Semnopithecus_entellus.k141_158471                         21109 6 +     27374 AG-GTG---T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24624 6 +     58920 AG-GTG---T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11121 6 -     45317 AG-GTG---T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18778 6 -     42441 AG-GTG---T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21460 6 -     29113 AG-GTG---T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24532 6 -     48123 AG-GTG---T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854282 6 -   1910179 AG-TTA---T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855448 6 +   3870691 AG-GTA---C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              2160 3 -     97271 AT-G------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 6
s Suricata_suricatta.SurSur_flattened_line_6629             120850 3 +    196729 AG-A------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 6
s Sus_scrofa.CM000828.4                                    6639572 6 +  69701581 AG-ATG---T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386704 6 +   1523678 AG-GTG---T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                24695 2 -     25844 -----G---G
i Tamandua_tetradactyla.TamTet_scaffold_67439            I 4 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187358 6 +    199430 ag-gtg---t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 6
s Tapirus_terrestris.TapTer_scaffold_755                    101313 6 -    539355 AG-GTG---T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 6
s Tarsius_lariang.k141_1780720                                3069 6 +      6850 AG-GTG---T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3153 6 +     20590 AG-GTG---T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349014 6 - 186847797 AG-gtg---t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                    9770 2 -     31044 -----G---T
i Tolypeutes_matacus.TolMat_scaffold_31955               I 14 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475411 6 -    610378 AA-CCT---T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16673 6 +     26378 AG-GTG---T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29354 6 -     78344 AG-GTG---T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       15994 6 +     25722 AG-GTG---T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24217 6 -     62838 AG-GTG---T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24336 6 +     46913 AG-GTG---T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5144 6 -     28527 AG-GTG---T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26156 6 -     64340 AG-GTG---T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24193 6 -     63452 AG-GTG---T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5635 6 +     22490 AG-GTG---T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3255 6 +      4141 AG-GTG---T
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6061 6 -     13050 AG-GTG---T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251297 6 -   6242583 AG-GTG---T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57030 6 +     59866 AG-GTG---T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478761 6 -  10818551 ac-ctg---t
i Trichechus_manatus.JH594705.1                          I 30 C 0
s Tupaia_chinensis.KB338335.1                                  115 6 -       332 AG-GTG---T
i Tupaia_chinensis.KB338335.1                            I 67 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3272 6 -     70247 AG-GTG---T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359710 6 -  33153633 ag-ttg---t
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103516 6 -    105689 AT-ATA---T
i Uropsilus_gracilis.UroGra_scaffold_7153                I 34 I 5
s Ursus_maritimus.KK499267.1                                177376 3 +   5085361 ag-g------
i Ursus_maritimus.KK499267.1                             I 31 I 7
s Varecia_rubra.k141_787544                                  21242 6 -     30710 ag-gca---t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20150 6 -    147434 AG-GCA---T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74795 6 +   5488506 ag-atg---g
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100771 3 -    112863 AG-G------
i Vulpes_lagopus.VulLag_flattened_line_12041             I 31 I 6
s Xerus_inauris.XerIna_scaffold_2302                        162362 6 -    224448 AG-GTG---T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24635 3 -     86975 AG-G------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 6
s Ziphius_cavirostris.ZipCav_flattened_line_2431392            206 6 +       382 ag-gtg---t
i Ziphius_cavirostris.ZipCav_flattened_line_2431392      C 0 C 0
e Allochrocebus_solatus.k141_3554717                         14582 0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904 0 -     21945 C
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Carlito_syrichta.NW_007259797.1                           265462 0 +    496798 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        381 18 +     36723 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
s Acinonyx_jubatus.LLWD01001279.1                           808937 10 +   1699592 --------------------------------------------------------------------------t--t-----tat----cttcg------------
i Acinonyx_jubatus.LLWD01001279.1                        I 6 I 12
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410703  6 +  29979442 --------------------------------------------------------------------------------------g---tttct------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 7 I 12
s Ailurus_fulgens.LNAC01001112.1                            211619  9 +    347723 --------------------------------------------------------------------------t--t-----t--g---tttct------------
i Ailurus_fulgens.LNAC01001112.1                         I 6 I 12
s Allenopithecus_nigroviridis.k141_3755588                   43692 18 +     53615 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39507 18 +     44087 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68437  7 -     84148 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Alouatta_belzebul.k141_1011583                         I 7 C 0
s Alouatta_caraya.k141_1109140                               40660  7 -     78289 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Alouatta_caraya.k141_1109140                           I 7 C 0
s Alouatta_discolor.k141_2561099                             40108  7 +     55831 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Alouatta_discolor.k141_2561099                         I 7 C 0
s Alouatta_juara.k141_1687208                                38549  7 -     64179 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Alouatta_juara.k141_1687208                            I 7 C 0
s Alouatta_macconnelli.k141_361275                           20192  7 -     24835 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Alouatta_macconnelli.k141_361275                       I 7 C 0
s Alouatta_nigerrima.k141_376068                             37175  7 +     45454 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Alouatta_nigerrima.k141_376068                         I 7 C 0
s Alouatta_palliata.k141_638677                              42874  7 +     70886 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Alouatta_palliata.k141_638677                          I 7 C 0
s Alouatta_puruensis.k141_251022                              5001  7 +     30854 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Alouatta_puruensis.k141_251022                         I 7 C 0
s Alouatta_seniculus.k141_928287                             29140  7 +     42133 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Alouatta_seniculus.k141_928287                         I 7 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583642 21 +   2318259 TT-----------------------TC---------------A---------------C-----T---------TTCT-----GCTT---G---TT---T-----CT
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_1412                      172372 54 -    412891 TTCTTTTTTTTTTGTTTTTTTTTGTTT-T-T-TTGTTTTTTCC---------------C-----C---------T--T-----GCTT---C---TT---C-----CT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 8
s Antilocapra_americana.AntAmePen_scaffold_21030             48738 21 -     68529 TT-----------------------TC---------------A---------------C-----T---------TGCT-----GCTT---C---TT---T-----CT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 7
s Aotus_azarae.k141_118258                                   46938 20 -     65372 T------------------------TT---------------CTCTTTCTGCTCCCT-T-----C------------------------------------------
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40686 20 +     43593 T------------------------TT---------------CTCTTTCTGCTCCCT-T-----C------------------------------------------
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668696 20 +   5030052 t------------------------tt---------------ctctttctgctcccT-T-----C------------------------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20338 20 -     23494 T------------------------TT---------------CTCTTTCTGCTCCCT-T-----C------------------------------------------
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5474 20 +      8415 T------------------------TT---------------CTCTTTCTGCTCCCT-T-----C------------------------------------------
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11698  5 -     32367 T------------------------TT---------------C---------------T------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 8
s Arctocebus_calabarensis.k141_1364444                       15575 21 -     45910 T------------------------TT---------------C---------------T-----C---------T--T-----CCAA---A---TCTTTC-----CT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   236 30 -     15198 T------------------------TTGTTTGTT-T--TTTGC---------------C-----C---------T--T-----GCTT---C---TT---C-----TT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 8
s Ateles_geoffroyi_b.tarseq_1536                               270935  7 +  21539123 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Ateles_geoffroyi_b.tarseq_1536                            I 7 C 0
s Ateles_belzebuth.k141_1572163                               7106  7 +     48076 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Ateles_belzebuth.k141_1572163                          I 7 C 0
s Ateles_chamek.k141_615173                                   2240  7 -     28759 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Ateles_chamek.k141_615173                              I 7 C 0
s Ateles_geoffroyi_a.k141_1283730                              29792  7 +     44353 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Ateles_geoffroyi_a.k141_1283730                          I 7 C 0
s Ateles_marginatus.k141_970259                              45167  7 -     71267 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Ateles_marginatus.k141_970259                          I 7 C 0
s Ateles_paniscus.k141_866194                                19223  7 -     33135 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Ateles_paniscus.k141_866194                            I 7 C 0
s Avahi_laniger.k141_2756659                                  2340 10 +     11645 -----------------------------------------------------------------------------T-----TCTT---C---T----C-----TT
i Avahi_laniger.k141_2756659                             I 5 C 0
s Avahi_peyrierasi.k141_1823318                               2342 10 -     19611 -----------------------------------------------------------------------------T-----TCTT---C---T----C-----TT
i Avahi_peyrierasi.k141_1823318                          I 5 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955467 25 -  23207421 t-----------------------tcc---------------a---------------c-----tttctgc---t--t-----cttc---c---tc---c-----ct
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 3
s Balaenoptera_bonaerensis.DF507193.1                         2675 25 -      4711 t-----------------------tcc---------------a---------------c-----tttctgc---t--t-----cttt---c---tc---c-----ct
i Balaenoptera_bonaerensis.DF507193.1                    C 0 I 3
s Beatragus_hunteri.BeaHun_scaffold_7278                     84636 21 +    124022 TT-----------------------TC---------------A---------------C-----T---------TTCT-----GCTT---C---TT---T-----CT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 7
s Bison_bison.KN261452.1                                     20167 21 +    288883 t-----------------------ttc---------------a---------------c-----t---------ttct-----gctt---c---tt---t-----ct
i Bison_bison.KN261452.1                                 C 0 I 7
s Bos_indicus.CM003047.1                                  20354554 21 +  48749331 TT-----------------------Tc---------------a---------------c-----t---------ttct-----gctt---c---tt---t-----ct
i Bos_indicus.CM003047.1                                 C 0 I 7
s Bos_mutus.JH880303.1                                      753122 21 +   1948126 t-----------------------ttc---------------a---------------c-----t---------ttct-----gctt---c---tt---t-----ct
i Bos_mutus.JH880303.1                                   C 0 I 7
s Bos_taurus.CM000203.6                                   27543261 21 -  45695690 TT-----------------------Tc---------------a---------------c-----t---------ttct-----gctt---c---tt---t-----ct
i Bos_taurus.CM000203.6                                  C 0 I 7
s Bubalus_bubalis.KI419123.1                               1528283 21 -   4408762 t-----------------------ttc---------------a---------------c-----t---------ttct-----gctt---c---tt---t-----ct
i Bubalus_bubalis.KI419123.1                             C 0 I 7
s Cacajao_ayresi.k141_96119                                   4118 18 +     28062 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39413 18 -     91139 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16938 18 +     95584 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16851 18 +    119600 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629472 12 +  17673402 --------------------------------------------------------------------------C--T-----GCtt---c---tt---c-----ct
i Camelus_bactrianus.KN276810.1                          I 9 I 8
s Camelus_dromedarius.KN272107.1                           4663758 12 +   7040546 --------------------------------------------------------------------------c--t-----gctt---c---tt---c-----ct
i Camelus_dromedarius.KN272107.1                         I 9 I 8
s Camelus_ferus.KB017975.1                                 1207418 12 +   1652518 --------------------------------------------------------------------------C--T-----GCtt---c---tt---c-----ct
i Camelus_ferus.KB017975.1                               I 9 I 8
s CanFam4.chr16                                           42501147 11 +  60362399 --------------------------------------------------------------------------T--T-----TATG---CTTCT------------
i CanFam4.chr16                                          I 6 I 12
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4777 11 -     23171 --------------------------------------------------------------------------T--T-----TATG---CTTCT------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 6 I 12
s Canis_lupus_dingo.QKWQ01000480.1                          218138 11 +   9314153 --------------------------------------------------------------------------T--T-----TATG---CTTCT------------
i Canis_lupus_dingo.QKWQ01000480.1                       I 6 I 12
s Canis_lupus_familiaris.chr16                            41611263 11 +  59632846 --------------------------------------------------------------------------T--T-----TATG---CTTCT------------
i Canis_lupus_familiaris.chr16                           I 6 I 12
s Canis_lupus_orion.HG994398.1                            45102833 11 -  63665305 --------------------------------------------------------------------------T--T-----TATG---CTTCT------------
i Canis_lupus_orion.HG994398.1                           I 6 I 12
s Callimico_goeldii.k141_1609886                              6045  6 -     13885 T------------------------TT---------------C---------------T-----C------------------------------------------
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14731  6 +     17162 T------------------------TT---------------C---------------T-----C------------------------------------------
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449687  6 + 189096842 T------------------------TT---------------C---------------T-----C------------------------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15980  6 -     18408 T------------------------TT---------------C---------------T-----C------------------------------------------
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Capra_aegagrus.CM003241.1                               27407353 21 -  46296322 t-----------------------ttc---------------a---------------c-----t---------ttct-----gctt---g---TT---T-----CT
i Capra_aegagrus.CM003241.1                              C 0 I 4
s Capra_hircus.CM004588.1                                 26589626 21 +  44709034 t-----------------------ttc---------------a---------------c-----t---------ttct-----gctt---G---TT---T-----CT
i Capra_hircus.CM004588.1                                C 0 I 4
s Carlito_syrichta.NW_007259797.1                           265462 21 +    496798 t------------------------tt---------------a---------------a-----c---------t--t-----tctatttc---tt---c-----ct
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                278 34 +      5315 TT-----------------------TTGTGTGTTGTGATTTGC---------------C-----C---------T--T-----GCTT---C---TT---C-----CT
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 8
s Catagonus_wagneri.CatWag_scaffold_2839                     75113 21 -    217609 TT-----------------------TC---------------A---------------C-----A---------TTCT-----GCTT---C---TT---C-----CT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 3
s Cephalopachus_bancanus.k141_1275952                        13748 15 -     50533 --------------------------------------------------------------------------T--T-----TCTATTTC---TT---C-----CT
i Cephalopachus_bancanus.k141_1275952                    I 6 C 0
s Ceratotherium_simum.JH767749.1                          15488348 12 -  27778364 --------------------------------------------------------------------------t--t-----tctg---c---tt---c-----tt
i Ceratotherium_simum.JH767749.1                         I 6 I 11
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15181 12 +     27315 --------------------------------------------------------------------------T--T-----TCTG---C---TT---C-----TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 6 I 11
s Cebuella_niveiventris.k141_592277                           1265  6 -     12580 T------------------------TT---------------C---------------T-----C------------------------------------------
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39151  6 +     53515 T------------------------TT---------------C---------------T-----C------------------------------------------
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367383  6 -  26074798 T------------------------TT---------------C---------------T-----C------------------------------------------
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4272  6 -     34880 T------------------------TT---------------C---------------T-----C------------------------------------------
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63367  6 -     89041 T------------------------TT---------------C---------------T-----C------------------------------------------
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cercocebus_atys.KQ010504.1                                136852 18 -   4669795 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---tc---C-----CT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40593 18 +     47900 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40425 18 -     44860 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40407 18 -    148725 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23393 18 -     40656 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3401 18 +     20796 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7656 18 -     17524 T------------------------CT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23348 18 -     34525 T------------------------CT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8068 18 -     25376 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360545 18 -  39242232 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266373 18 +  21565898 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27819 18 -     45857 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23610 18 -     32606 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27259 18 +     27662 T------------------------CT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21309 18 +     70610 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18174 18 +     36323 T------------------------CT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             2777 17 -     19938 T------------------------T----------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----TT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 3
s Cheirogaleus_major.k141_666340                             26756 17 -     33796 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---T----C-----CT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              951 17 -     15404 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---T----C-----CT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5216 18 -     32913 T------------------------TT---------------C---------------T-----G---------C--T-----TCTA---C---TC---C-----CT
i Cheracebus_lucifer.k141_2312002                        I 1 C 0
s Cheracebus_lugens.k141_1179667                             15629 18 -     40346 T------------------------TT---------------C---------------T-----G---------C--T-----TCTA---C---TC---C-----CT
i Cheracebus_lugens.k141_1179667                         I 1 C 0
s Cheracebus_regulus.k141_471822                             15893 18 +    216457 T------------------------TT---------------C---------------T-----G---------C--T-----TCTA---C---TC---C-----CT
i Cheracebus_regulus.k141_471822                         I 1 C 0
s Cheracebus_torquatus.k141_890198                           15672 18 +     39636 T------------------------TT---------------C---------------T-----G---------C--T-----TCTA---C---TC---C-----CT
i Cheracebus_torquatus.k141_890198                       I 1 C 0
s Chiropotes_albinasus.k141_2737257                          16724  5 -     17061 T------------------------TT---------------T---------------C------------------------------------------------
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38757 18 -    112038 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4329 18 +     34062 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339072 18 +  18827391 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5676 18 -     44032 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300398 18 - 135778131 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---tc---C-----CT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                  9589 18 +     15858 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----TT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 3
s Choloepus_hoffmanni.KN194906.1                            601165 18 -    839153 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---tc---c-----tt
i Choloepus_hoffmanni.KN194906.1                         C 0 I 3
s Colobus_angolensis.KN981557.1                             404929 18 -   2368649 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---tc---C-----CT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374119 18 - 200372422 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4813 18 -      6605 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803240 19 +  53390261 t-----------------------ttt---------------c---------------t-----t---------t--t-----tctg---c---tt---g-----tt
i Condylura_cristata.JH655891.1                          I 213 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8654 25 +     10921 TT-T---------------------TT---------------C---------------T-----C---------C--T-----GCCT---C---TT---CCTTCCAT
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 15 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129               176 11 +     87169 --------------------------------------------------------------------------T--T-----TATG---CTTCT------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 6 I 10
s Dasypus_novemcinctus.JH564415.1                          2087841 18 -   2246927 T------------------------TC---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----TT
i Dasypus_novemcinctus.JH564415.1                        C 0 I 3
s Daubentonia_madagascariensis.ctg71                        288774 21 +  12879189 T------------------------TT---------------C---------------T-----T---------T--T-----TCTA---C---TCCTTC-----TT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623795 25 -  35494412 TT-----------------------Cc---------------a---------------c-----tttctgc---t--t-----cttc---c---tc---c-----ct
i Delphinapterus_leucas.KZ290073.1                       C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660635 12 -   1390856 --------------------------------------------------------------------------t--t-----tctg---c---tg---c-----tt
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 6 I 11
s Diceros_bicornis.DicBicMic_scaffold_5955                  135427 12 -    198055 --------------------------------------------------------------------------T--T-----TCTG---C---TT---C-----TT
i Diceros_bicornis.DicBicMic_scaffold_5955               I 6 I 11
s Eidolon_helvum.AWHC01266696.1                               1996 24 +     19438 T-C----------------------CC---------------C---------------C-----C---------T--T-----GCTT---C---TT---CCTTTCAT
i Eidolon_helvum.AWHC01266696.1                          C 0 I 3
s Elaphurus_davidianus.JRFZ01104969.1                       238029 21 -    607251 TT-----------------------TC---------------A---------------C-----T---------TTCT-----GCTG---C---TT---T-----CT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 4
s Enhydra_lutris.KZ291758.1                               24906158  9 +  41312741 --------------------------------------------------------------------------t--t-----t--g---tttct------------
i Enhydra_lutris.KZ291758.1                              I 6 I 12
s Eptesicus_fuscus.JH977646.1                             12573570 20 +  14770903 c----------------------cccc---------------c---------------a-----c---------c--c-----cctg---c---tt---c-----tt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037592 12 -   4378816 --------------------------------------------------------------------------t--t-----tctg---c---tt---t-----tt
i Equus_asinus.JREZ01000139.1                            I 6 I 11
s Equus_caballus.CM000403.2                               21371526 12 +  39960074 --------------------------------------------------------------------------t--t-----tctg---c---tt---t-----tt
i Equus_caballus.CM000403.2                              I 6 I 11
s Equus_przewalskii.KK951119.1                              408312 12 -    498745 --------------------------------------------------------------------------t--t-----tctg---c---tt---t-----tt
i Equus_przewalskii.KK951119.1                           I 6 I 11
s Erythrocebus_patas.Contig38                               258628 18 +  21539334 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63346 25 -    133382 t-----------------------tcc---------------a---------------c-----tttctgc---t--t-----cttc---c---tc---c-----ct
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_118172             3562 25 +      7672 t-----------------------tcc---------------a---------------c-----tttctgc---t--t-----cttc---c---tc---c-----ct
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 I 3
s Eulemur_albifrons.k141_51491                               11735 17 -     24895 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---t----c-----ct
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39447 17 -     70999 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---t----c-----ct
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83407 17 +    112731 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---t----c-----ct
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39979 17 +     68309 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---t----c-----ct
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50304 17 -     65740 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---T----C-----CT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20934 17 -     75513 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---T----C-----CT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45127 17 -     97555 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---T----C-----CT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1856 13 +     30972 ----------------------------------------------------------T-----C---------T--T-----TCTA---C---T----C-----CT
i Eulemur_rubriventer.k141_1423786                       I 2 C 0
s Eulemur_rufus.k141_514691                                  39577 17 -     52037 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---t----c-----ct
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55978 17 -    111500 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---t----c-----ct
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242596 10 - 206538554 --------------------------------------------------------------------------T--T-----TAT----CTTCG------------
i Felis_catus.CM001381.2                                 I 6 I 12
s Felis_catus_fca126.CM031415.1                          185112378 10 - 205367284 --------------------------------------------------------------------------T--T-----TAT----CTTCG------------
i Felis_catus_fca126.CM031415.1                          I 6 I 12
s Felis_nigripes.FelNig_flattened_line_31944                 23726 10 -     30238 --------------------------------------------------------------------------T--T-----TAT----CTTCG------------
i Felis_nigripes.FelNig_flattened_line_31944             I 6 I 12
s Galago_moholi.ctg3793                                     119157 21 -    137831 T------------------------TT---------------C---------------T-----C---------T--T-----TTGA---C---TCCTTC-----CT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             2697 21 +     22493 T------------------------TT---------------C---------------T-----C---------T--T-----TTGA---C---TCCTTC-----CT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            14890 21 -     32986 T------------------------TC---------------C---------------T-----C---------T--T-----TTGA---C---TCCTTC-----CT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14935 18 +     18121 T------------------------TT---------------C---------------T-----C---------T--T-----TTTA---C---TC---C-----TT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 3
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89704 21 -     95226 t-----------------------ttc---------------a---------------c-----t---------ttct-----gctt---c---tt---t-----ct
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 7
s Gorilla_beringei.k141_3358147                                738 18 -      8343 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Gorilla_beringei.k141_3358147                          I 72 I 33
s Gorilla_gorilla.LT578341.1                                250233 18 - 186649187 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---tc---C-----CT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11668 17 -     40692 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---T----T-----CT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33070 17 +     49394 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---t----t-----ct
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57938 17 -     66874 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---t----t-----ct
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6815 17 -     42923 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---T----T-----CT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13811 17 -     53142 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---T----T-----CT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26491 11 -    327341 --------------------------------------------------------------------------G--T-----TATG---CTTCT------------
i Helogale_parvula.HelPar_flattened_line_2585            I 6 I 10
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7457 21 +     48891 TT-----------------------TC---------------A---------------C-----T---------TTCT-----GCTT---G---TT---T-----CT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 4
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10950 16 +     12639 T------------------------TT---------------C---------------T-----C---------T--T-----TTTC---C---TC---C-------
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6046 25 -     36432 t-----------------------ttc---------------a---------------c-----tttctgc---t--t-----cctc---c---tc---c-----ct
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 3
s Hipposideros_armiger.JXIK01000431.1                      1545886 33 -   1711038 c-----------------------ccc---------------c---------------c-----cccccccccca--c-----gctT---C---TT---CCTTTCAT
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_23202               45210 17 +     49977 --------------------------------------------------------------------------C--C-----GCTT---C---TT---CTTTCATT
i Hipposideros_galeritus.HipGal_scaffold_23202           I 34 I 3
s Hoolock_leuconedys.ctg274                                    138133 18 -    630532 T------------------------TT---------------T---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  64660 11 +     83186 --------------------------------------------------------------------------T--T-----TATG---CTTCT------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 6 I 10
s Hylobates_agilis.k141_1155965                               1161 18 +     12352 T------------------------TT---------------T---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8344 18 +     55766 T------------------------TT---------------T---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047688 18 + 191637585 T------------------------TT---------------T---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797020 18 +  11177569 T------------------------TT---------------T---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375077 21 +   7955117 T------------------------TT---------------C---------------T-----C---------T--T-----TGTa---c---tctttc-----tt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2435083                                    1015 17 +      1070 T------------------------TT---------------C---------------T-----C---------T--T-----TTCA---C---T----C-----CT
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1582 25 -     16823 t-----------------------tcc---------------a---------------c-----tttctgc---t--t-----cctc---c---tc---c-----ct
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_3970                 64079 18 -     97402 TT-----------------------CC---------------A---------------C-----T---TTCTGCT--T-----CTT---------------------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 2
s Lagothrix_lagothricha.k141_246028                          39482  7 +    110728 --------------------------------------------------------------------------------------A---C---TC---C-----CT
i Lagothrix_lagothricha.k141_246028                      I 7 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59080 19 -     65777 T-C----------------------CC---------------C---------------A-----C---------C--C-----CCTG---C---TT---C-----TT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756460 17 +  30322482 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---t----t-----ct
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        5136  6 -      5330 T------------------------TT---------------C---------------T-----C------------------------------------------
i Leontocebus_fuscicollis.k141_3469711                   C 0 C 0
s Leontocebus_illigeri.k141_2813249                          16574  6 -     16762 T------------------------TT---------------C---------------T-----C------------------------------------------
i Leontocebus_illigeri.k141_2813249                      C 0 C 0
s Leontocebus_nigricollis.k141_5626589                       16872  6 -     17065 T------------------------TT---------------C---------------T-----C------------------------------------------
i Leontocebus_nigricollis.k141_5626589                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6394  6 -     11567 T------------------------TT---------------C---------------T-----C------------------------------------------
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7775  6 -     12945 T------------------------TT---------------C---------------T-----C------------------------------------------
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5114 17 +     29618 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---T----C-----CT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5113 17 +     31569 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---T----C-----CT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5119 17 +     24756 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---A----C-----CT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5118 17 +     16388 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---T----C-----CT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809243 16 -   3914936 --------------------------------------------------------------------------T--TCCTACTATG---tttct------------
i Leptonychotes_weddellii.KB714746.1                     I 6 I 12
s Lipotes_vexillifer.KE559953.1                             333105 25 +    662738 t-----------------------tcc---------------a---------------c-----tttctgc---t--t-----cttc---c---tc---c-----ct
i Lipotes_vexillifer.KE559953.1                          C 0 I 3
s Lophocebus_aterrimus.ctg367                               328808 18 -   1826925 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2135 21 +     19643 T------------------------TT---------------C---------------T-----C---------T--T-----TCAA---T---TCCTTC-----AT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5035793 21 -   6120653 T------------------------TT---------------C---------------T-----C---------T--T-----TCAA---T---TCCTTC-----AT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39076112 18 +  43346337 t------------------------tt---------------c---------------t-----c---------t--t-----tctg---c---tc---c-----tt
i Loxodonta_africana.GL010049.1                          C 0 I 3
s Lycaon_pictus.CM007581.1                                41610418 11 +  59628241 --------------------------------------------------------------------------T--T-----TATG---CTTCT------------
i Lycaon_pictus.CM007581.1                               I 6 I 12
s Macaca_arctoides.k141_1757516                              41089 18 -     61512 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368717 18 -  60120075 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21036 18 +     30207 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18139 18 -     24934 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20923 18 +     30527 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32112 18 -     50087 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41850 18 +     51645 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410424 18 - 187317192 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---tc---C-----CT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395307 18 +  25927173 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---tc---C-----CT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44439 18 -     62418 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21126 18 +     24253 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40883 18 +     59329 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266715 18 +    668171 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18061 18 +     21031 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31793 18 +     33478 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219068 24 -    270270 TT-----------------------CC---------------C---------------C-----C---------T--T-----GCTT---C---TT---CCTTTCAT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 3
s Mandrillus_leucophaeus.scaffold280                        318191 18 +  24302211 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353023 18 -    752769 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669810  8 -    737560 --------------------------------------------------------------------------t--t-----tctg---t---t------------
i Manis_javanica.JSZB01003497.1                          I 6 I 12
s Manis_pentadactyla.KN006162.1                             217104  8 +    317179 --------------------------------------------------------------------------t--t-----tctg---t---t------------
i Manis_pentadactyla.KN006162.1                          I 6 I 12
s Marmota_marmota.CZRN01000018.1                           7489176 15 +  40650429 --------------------------------------------------------------------------T--T-----TGTa---c---tctttc-----tt
i Marmota_marmota.CZRN01000018.1                         I 6 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146153 17 +    207569 --------------------------------------------------------------------------C--T-----GGTT---C---TT---CCTTCCAT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 8 I 3
s Mellivora_capensis.MelCap_flattened_line_19308             14170  9 -     74585 --------------------------------------------------------------------------T--T-----T--G---TTTCT------------
i Mellivora_capensis.MelCap_flattened_line_19308         I 6 I 12
s Mesoplodon_bidens.MesBid_scaffold_6114                     79662 12 +     93471 --------------------------------------------------------------------------t--t-----cttc---c---tc---c-----ct
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 13 I 3
s Mico_argentatus.k141_582562                                 6153  6 +     17804 T------------------------TT---------------C---------------T-----C------------------------------------------
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6926  6 -     12984 T------------------------TT---------------C---------------T-----C------------------------------------------
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14888  6 -     26561 T------------------------TT---------------C---------------T-----C------------------------------------------
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980719 17 +  93316391 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---t----c-----cT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180386 15 +    200668 ------------------------------------------C---------------C-----C---------T--C-----ACCT---C---TT---C-----CT
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 7 I 8
s Miopithecus_ogouensis.k141_1534655                         18102 18 -     27822 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4259 16 +     27589 --------------------------------------------------------------------------T--TCCTACTATG---TTTCT------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 6 I 12
s Mirza_zaza.k141_766280                                     48580 17 -     62432 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---T----C-----CT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351538 25 +    437263 TT-----------------------CC---------------A---------------C-----T---TTCTGCT--T-----CTTC---C---TC---C-----CT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174550 21 +    366855 TT-----------------------CT---------------T---------------T---TTC---------T--T-----GCTC---C---TT---C-----CT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 8
s Moschus_moschiferus.MosMos_scaffold_13123                  22609 21 -     82753 TT-----------------------TC---------------A---------------C-----T---------TTCT-----GCTT---C---TT---T-----CT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 7
s Mungos_mungo.MunMun_flattened_line_18455                   14260 11 -     63510 --------------------------------------------------------------------------G--T-----TATG---CTTCT------------
i Mungos_mungo.MunMun_flattened_line_18455               I 6 I 10
s Murina_feae.MurFea_scaffold_17764                          33479 34 +     47283 CT-----------------------CC---------------CTCGCCCTCCCCCCTCC-----C---------C--C-----CTAA---C---TT---C-----TT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343214  9 +  14710649 --------------------------------------------------------------------------t--t-----t--g---tttct------------
i Mustela_putorius.JH418006.1                            I 6 I 12
s Myotis_brandtii.KE162005.1                               9787939  7 +  10118263 --------------------------------------------------------------------------------------G---C---TT---C-----TT
i Myotis_brandtii.KE162005.1                             I 8 C 0
s Myotis_davidii.KB100139.1                                4378318 39 +   6019432 c-----------------------ccc---------------cccccccccccNNNNNNNNNNNN---------N--N-----NNNN---N---NT---C-----TT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18563  7 -     39439 --------------------------------------------------------------------------------------G---C---TT---C-----TT
i Myotis_lucifugus.GL432175.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1882 14 +      3929 ----------------------------------------------------------C-----A---------C--C-----CCCG---C---TT---C-----TT
i Myotis_myotis.MyoMyo_scaffold_185951                   I 7 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              109745 18 +    130748 T------------------------TT---------------T---------------C-----C---------T--T-----TCTC---C---TT---T-----TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 3
s Nasalis_larvatus.k141_1350636                              24467 18 +     34575 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464655 16 -  31847680 --------------------------------------------------------------------------T--TCCTACTATG---tttct------------
i Neomonachus_schauinslandi.NINY01007730.1               I 6 I 12
s Neophocaena_asiaeorientalis.KZ687982.1                   1225707 25 -   7148211 TT-----------------------CC---------------a---------------c-----tttctgc---t--t-----cttc---c---tc---c-----ct
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_7894                   122762 19 -    149072 TT-----------------------TT---------------C---------------C-----C---------T--T-----GCTT---C---TC---C-----CT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 3
s Nomascus_annamensis.k141_1771965                           49418 18 -    132029 T------------------------TT---------------T---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5514 18 -     16345 T------------------------TT---------------T---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11397 18 +     22201 T------------------------TT---------------T---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409734 18 -  22158432 T------------------------TT---------------T---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21797 18 -     54323 T------------------------TT---------------T---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194034 11 +   9404916 --------------------------------------------------------------------------T--T-----TATG---CTTCT------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 6 I 12
s Nycticebus_bengalensis.LG01                             93630908 21 + 196305487 T------------------------TT---------------C---------------T-----C---------T--T-----TCAA---C---TCCTTT-----AT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              297 21 +      2758 t------------------------tt---------------c---------------t-----C---------T--T-----TCAA---C---TCCTTT-----AT
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559188 21 - 199412804 T------------------------TT---------------C---------------T-----C---------T--T-----TCAA---C---TCCTTC-----AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447425 16 +   2017862 --------------------------------------------------------------------------T--TCCTACTATG---tttct------------
i Odobenus_rosmarus.KB229312.1                           I 6 I 12
s Odocoileus_virginianus.KZ100018.1                         434600 21 -    630418 TT-----------------------TC---------------A---------------C-----T---------TTCT-----GCTG---C---TT---T-----CT
i Odocoileus_virginianus.KZ100018.1                      C 0 I 4
s Okapia_johnstoni.LVCL01S0005463.1                          12588 21 +    150152 t-----------------------ttc---------------a---------------c-----t---------ttct-----gctt---c---tt---t-----ct
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 7
s Orcinus_orca.KB316932.1                                  8094977 25 +  10937097 TT-----------------------CC---------------a---------------c-----tttctgc---t--t-----cttc---c---tc---c-----ct
i Orcinus_orca.KB316932.1                                C 0 I 3
s Otocyon_megalotis.JAEUCK010005147.1                        35100 11 +    559221 --------------------------------------------------------------------------T--T-----TATG---CTTCT------------
i Otocyon_megalotis.JAEUCK010005147.1                    I 6 I 15
s Otolemur_crassicaudatus.k141_85057                         22433 21 -     23432 T------------------------TT---------------C---------------T-----C---------T--T-----TTGA---C---TCCTTC-----CT
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             346998 21 +   1103335 T------------------------TT---------------C---------------T-----C---------T--T-----TTGA---C---TCCTTC-----CC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402577 21 -  44047080 TT-----------------------TC---------------A---------------C-----T---------TTCT-----GCTT---G---TT---T-----CT
i Ovis_aries.CM001607.2                                  C 0 I 4
s Ovis_canadensis.OviCan_scaffold_67953                       3096 21 +     17875 TT-----------------------TC---------------A---------------C-----T---------TTCT-----GCTT---G---TT---T-----CT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 4
s Pan_troglodytes.KZ622849.1                                 28705 18 -    110857 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Pan_troglodytes.KZ622849.1                             I 319 I 34
s Panthera_onca.PanOnc_flattened_line_3271                   20314 10 -    230217 --------------------------------------------------------------------------T--T-----TGT----CTTCT------------
i Panthera_onca.PanOnc_flattened_line_3271               I 6 I 12
s Panthera_pardus.KV860321.1                              18457640 10 -  18783137 --------------------------------------------------------------------------t--t-----tat----cttct------------
i Panthera_pardus.KV860321.1                             I 6 I 12
s Panthera_tigris.KE722367.1                               3968369 10 +   8748460 --------------------------------------------------------------------------t--t-----tat----cttct------------
i Panthera_tigris.KE722367.1                             I 6 I 12
s Pantholops_hodgsonii.KE114653.1                          1614023 21 +   2937107 t-----------------------ttc---------------a---------------c-----t---------ttct-----gctt---g---tT---T-----CT
i Pantholops_hodgsonii.KE114653.1                        C 0 I 4
s Papio_anubis.CM001495.2                                   239035 18 - 183742232 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---tc---C-----CT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5502 18 +     21308 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286539 18 -  20919399 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18155 18 -     27687 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11291 18 +     16796 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18101 18 -     23640 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11231 11 +     78924 --------------------------------------------------------------------------T--T-----TATG---TTTCT------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 6 I 11
s Perodicticus_ibeanus.k141_1921260                          20997 21 +     31479 T------------------------TT---------------C---------------T-----C---------T--T-----CCGT---A---TCTTTC-----CT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13368 21 -     24908 T------------------------TT---------------C---------------T-----C---------T--T-----CCGT---A---TCTTTC-----CT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10835 25 -     15039 TT-----------------------CC---------------A---------------C-----T---TTCTGCT--T-----CTTC---C---TC---C-----CT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 I 3
s Piliocolobus_badius.k141_2495623                            4921 18 +      7560 T------------------------TT---------------C---------------T-----C---------T--T-----TCCG---C---TG---C-----CT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60628 18 -     63152 T------------------------TT---------------C---------------T-----C---------T--T-----TCCG---C---TG---C-----CT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43227 18 +     45295 T------------------------TT---------------C---------------T-----C---------T--T-----TCCG---C---TG---C-----CT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     906 18 +      5735 T------------------------TT---------------C---------------T-----C---------T--T-----TCCG---C---TG---C-----CT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45764 20 +     46691 C-C---------------------CCT---------------C---------------A-----C---------C--C-----CCTG---C---TT---C-----TT
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61107 18 +    207309 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2227 18 -     25401 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27942 18 +     58159 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28218 18 +     63561 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27981 18 +     51148 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552974 18 -   4542175 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27965 18 +     51125 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2919 25 -      8168 t-----------------------gcc---------------a---------------c-----tttctgc---t--t-----cttc---t---tc---c-----ct
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 I 3
s Plecturocebus_bernhardi.k141_2549090                        4398 18 +     39866 T------------------------TT---------------C---------------T-----G---------C--C-----TCTA---C---TC---C-----CT
i Plecturocebus_bernhardi.k141_2549090                   I 1 C 0
s Plecturocebus_caligatus.k141_1382851                       38886 18 -     87950 T------------------------TT---------------C---------------T-----G---------C--C-----TCTA---C---TC---C-----CT
i Plecturocebus_caligatus.k141_1382851                   I 1 C 0
s Plecturocebus_cinerascens.k141_1164729                     39279 18 -     88961 T------------------------TT---------------C---------------T-----G---------C--C-----TCTC---C---TC---C-----CT
i Plecturocebus_cinerascens.k141_1164729                 I 1 C 0
s Plecturocebus_cupreus.k141_2351393                          3979 18 -     39403 T------------------------TT---------------C---------------T-----G---------C--C-----TCTA---C---TC---C-----CT
i Plecturocebus_cupreus.k141_2351393                     I 1 C 0
s Plecturocebus_dubius.k141_1058799                          38932 18 +     87928 T------------------------TT---------------C---------------T-----G---------C--C-----TCTA---C---TC---C-----CT
i Plecturocebus_dubius.k141_1058799                      I 1 C 0
s Plecturocebus_grovesi.k141_2013005                          3976 18 -     60166 T------------------------TT---------------C---------------T-----G---------C--C-----TCTA---C---TC---C-----CT
i Plecturocebus_grovesi.k141_2013005                     I 1 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10912 18 -     67232 T------------------------TT---------------C---------------T-----G---------C--C-----TCTA---C---TC---C-----CT
i Plecturocebus_hoffmannsi.k141_3303950                  I 1 C 0
s Plecturocebus_miltoni.k141_349282                          38828 18 -     90634 T------------------------TT---------------C---------------T-----G---------C--C-----TCTA---C---TC---C-----CT
i Plecturocebus_miltoni.k141_349282                      I 1 C 0
s Plecturocebus_moloch.k141_1031110                          40296 18 +     89403 T------------------------TT---------------C---------------T-----G---------C--C-----TCTA---C---TC---C-----CT
i Plecturocebus_moloch.k141_1031110                      I 1 C 0
s Pongo_abelii.CM009266.2                                   173238 18 - 189387572 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188236 18 -   9816681 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23407 18 +     69807 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40602 18 -     80239 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8107 16 +     14086 T------------------------TT---------------C---------------T-----C---------T--T-----TTTC---C---TC---C-------
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 I 1
s Prolemur_simus.MPIZ01000396.1                            1979618 17 +   4620579 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---t----t-----ct
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562205 10 -   2598838 -----------------------------------------------------------------------------t-----tctg---c---t----c-----tt
i Propithecus_coquerelli.NW_012148875.1                  I 5 C 0
s Propithecus_coronatus.k141_149744                          79292 10 -     79582 -----------------------------------------------------------------------------T-----TCTG---C---T----C-----TT
i Propithecus_coronatus.k141_149744                      I 5 C 0
s Propithecus_diadema.k141_153680                              447 10 -     11706 -----------------------------------------------------------------------------T-----TCTG---C---T----C-----TT
i Propithecus_diadema.k141_153680                        I 5 C 0
s Propithecus_edwardsi.k141_635656                            4182 10 -     30655 -----------------------------------------------------------------------------T-----TCTG---C---T----C-----TT
i Propithecus_edwardsi.k141_635656                       I 5 C 0
s Propithecus_perrieri.k141_1496898                          30507 10 +     46564 -----------------------------------------------------------------------------T-----TCTG---C---T----C-----TT
i Propithecus_perrieri.k141_1496898                      I 5 C 0
s Propithecus_tattersalli.k141_1127767                       90798 10 -     98465 -----------------------------------------------------------------------------t-----tctg---c---t----c-----tt
i Propithecus_tattersalli.k141_1127767                   I 5 C 0
s Propithecus_verreauxi.k141_1047036                          4420 10 +     35169 -----------------------------------------------------------------------------T-----TCTG---C---T----C-----TT
i Propithecus_verreauxi.k141_1047036                     I 5 C 0
s Pteronotus_parnellii.KE847780.1                            47632 17 -     66298 ------------------------------------------t---------------c---ttc---------t--t-----gctc---c---tt---C-----CC
i Pteronotus_parnellii.KE847780.1                        I 2 I 7
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4309  9 -     10349 --------------------------------------------------------------------------T--T-----T--G---TTTCT------------
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 6 I 12
s Pteropus_alecto.KB030862.1                               5836541 24 -  28871421 TT-----------------------CC---------------C---------------C-----C---------T--T-----GCTT---C---TT---CCTTTCAT
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Pteropus_vampyrus.KN525825.1                             3533116 24 -   4952924 TT-----------------------CC---------------C---------------C-----C---------T--T-----GCTT---C---TT---CCTTTCAT
i Pteropus_vampyrus.KN525825.1                           C 0 I 3
s Puma_concolor.QAVW01001104.1                            18095192 10 +  38429054 --------------------------------------------------------------------------t--t-----tat----cttcG------------
i Puma_concolor.QAVW01001104.1                           I 6 I 12
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51564 14 +     55069 --------------------------------------------------------------------------TTCT-----GCTG---C---TT---T-----CT
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 7 I 4
s Rhinolophus_sinicus.LVEH01000134.1                       2909198 16 +   3329780 -----------------------------------------------------------------------------t-----gctt---c---tt---tcttcgAT
i Rhinolophus_sinicus.LVEH01000134.1                     I 7 I 3
s Rhinopithecus_bieti.k119_221883                            24625 18 +     27361 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104117984 18 + 195417433 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232233 18 -   7961872 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70592 18 -    116970 ----------------------------------------------------------------T---------G--T-----GCTT---C---TT---CCTTTTAT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 5 I 3
s Saguinus_bicolor.k141_1125626                              16628  6 +     16959 T------------------------TT---------------C---------------T-----C------------------------------------------
i Saguinus_bicolor.k141_1125626                          C 0 C 0
s Saguinus_geoffroyi.k141_2310874                            38478  6 +     72255 T------------------------TT---------------C---------------T-----C------------------------------------------
i Saguinus_geoffroyi.k141_2310874                        C 0 C 0
s Saguinus_imperator.k141_1164420                            11119  6 +     11432 T------------------------TT---------------C---------------T-----C------------------------------------------
i Saguinus_imperator.k141_1164420                        C 0 C 0
s Saguinus_inustus.k141_2555509                              16493  6 -     16755 T------------------------TT---------------C---------------T-----C------------------------------------------
i Saguinus_inustus.k141_2555509                          C 0 C 0
s Saguinus_labiatus.k141_3072636                             15064  6 -     15289 T------------------------TT---------------C---------------T-----C------------------------------------------
i Saguinus_labiatus.k141_3072636                         C 0 C 0
s Saguinus_midas.LG03                                       387060  6 - 209938924 T------------------------TT---------------C---------------T-----C------------------------------------------
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_2237965                                7924  6 +     22212 T------------------------TT---------------C---------------T-----C------------------------------------------
i Saguinus_mystax.k141_2237965                           C 0 C 0
s Saguinus_oedipus.k141_1808308                              16422  6 +     39756 T------------------------TT---------------C---------------T-----C------------------------------------------
i Saguinus_oedipus.k141_1808308                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6163 21 +     16473 TT-----------------------TC---------------A---------------C-----T---------TTCT-----GCTT---C---TT---T-----CT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 4
s Sapajus_apella.ctg103                                     234607  6 +   5703754 T------------------------TT---------------C---------------T-----C------------------------------------------
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4197  6 +     21866 T------------------------TT---------------C---------------T-----C------------------------------------------
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112295 19 +    313613 TT-----------------------TT---------------C---------------T-----T---------T--T-----TCTG---T---TG---C-----TT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 191 I 3
s Semnopithecus_entellus.k141_158471                         21115 18 +     27374 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24630 18 +     58920 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11127 18 -     45317 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18784 18 -     42441 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21466 18 -     29113 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24538 18 -     48123 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854288 19 -   1910179 TT-----------------------TT---------------C---------------T-----C---------T--T-----TCTG---A---AT---T-----TT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1855454 21 +   3870691 T------------------------TT---------------C---------------T-----C---------T--T-----TGTa---c---tctttc-----tt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              2169  9 -     97271 --------------------------------------------------------------------------T--T-----T--G---TTTCT------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 6 I 9
s Suricata_suricatta.SurSur_flattened_line_6629             120859 11 +    196729 --------------------------------------------------------------------------T--T-----TATG---CTTCT------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 6 I 10
s Sus_scrofa.CM000828.4                                    6639578 21 +  69701581 TT-----------------------TC---------------A---------------C-----A---------TTCT-----Gctg---c---tt---c-----ct
i Sus_scrofa.CM000828.4                                  C 0 I 3
s Symphalangus_syndactylus.tarseq_199                       386710 18 +   1523678 T------------------------TT---------------T---------------T-----C---------T--T-----TCTA---C---TC---C-----CT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                24697 18 -     25844 T------------------------TT---------------T---------------C-----C---------T--T-----TCTC---C---TT---T-----TT
i Tamandua_tetradactyla.TamTet_scaffold_67439            C 0 I 3
s Tapirus_indicus.TapInd_scaffold_7432                      187370 12 +    199430 --------------------------------------------------------------------------t--t-----tctg---c---tt---c-----tt
i Tapirus_indicus.TapInd_scaffold_7432                   I 6 I 11
s Tapirus_terrestris.TapTer_scaffold_755                    101325 12 -    539355 --------------------------------------------------------------------------T--T-----TCTG---C---TT---C-----TT
i Tapirus_terrestris.TapTer_scaffold_755                 I 6 I 11
s Tarsius_lariang.k141_1780720                                3075 21 +      6850 T------------------------TT---------------A---------------A-----C---------T--T-----TCCACTTC---TT---C-----CT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3159 21 +     20590 T------------------------TT---------------A---------------A-----C---------T--T-----TCCACTTC---TT---C-----CT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349020 18 - 186847797 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---c---tc---C-----CT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                    9772 18 -     31044 T------------------------TC---------------C---------------T-----C---------T--C-----TCTA---C---TC---C-----TT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 3
s Tonatia_saurophila.TonSau_scaffold_294                    475417 33 -    610378 TT-T--------------------CTT-T-T-TTTTTTTTTGC---------------C-----C---------T--T-----GCTT---C---TT---C-----CT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 8
s Trachypithecus_auratus.k141_1189070                        16679 18 +     26378 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29360 18 -     78344 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16000 18 +     25722 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24223 18 -     62838 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24342 18 +     46913 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5150 18 -     28527 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26162 18 -     64340 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24199 18 -     63452 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5641 18 +     22490 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3261 18 +      4141 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6067 18 -     13050 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251303 18 -   6242583 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57036 18 +     59866 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TG---C-----CT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478767 20 -  10818551 t------------------------tt---------------c---------------t-----c---------t--t-----tcta---ct-gtc---c-----tg
i Trichechus_manatus.JH594705.1                          C 0 I 3
s Tupaia_chinensis.KB338335.1                                  121 18 -       332 T------------------------TG---------------C---------------T-----C---------A--C-----TCTA---A---at---c-----tt
i Tupaia_chinensis.KB338335.1                            C 0 I 3
s Tupaia_tana.TupTan_flattened_line_394                       3278 18 -     70247 T------------------------TG---------------C---------------T-----C---------T--C-----TGTA---A---TT---C-----TT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 3
s Tursiops_truncatus.MRVK01000835.1                       17359716 25 -  33153633 t-----------------------tcc---------------a---------------c-----tttctgc---t--t-----cttc---c---tc---c-----ct
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_7153                   103527 16 -    105689 --------------------------T---------------A---------------T-----T---------T--T-----CCTG---C---TT---C-----TT
i Uropsilus_gracilis.UroGra_scaffold_7153                I 5 I 3
s Ursus_maritimus.KK499267.1                                177386  6 +   5085361 --------------------------------------------------------------------------------------g---tttct------------
i Ursus_maritimus.KK499267.1                             I 7 I 12
s Varecia_rubra.k141_787544                                  21248 17 -     30710 t------------------------tt---------------c---------------t-----c---------t--t-----tcca---c---t----c-----ct
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20156 17 -    147434 T------------------------TT---------------C---------------T-----C---------C--T-----TCTA---C---T----C-----CT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74801 21 +   5488506 t-----------------------ttc---------------a---------------c-----g-------ttc--t-----gctt---c---tt---c-----ct
i Vicugna_pacos.KN270157.1                               C 0 I 8
s Vulpes_lagopus.VulLag_flattened_line_12041                100780 11 -    112863 --------------------------------------------------------------------------T--T-----TATG---CTTCT------------
i Vulpes_lagopus.VulLag_flattened_line_12041             I 6 I 12
s Xerus_inauris.XerIna_scaffold_2302                        162368 21 -    224448 T------------------------TT---------------C---------------T-----C---------T--T-----TCTA---C---TCTTCC-----TT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 9
s Zalophus_californianus.ZalCal_flattened_line_17732         24644 16 -     86975 --------------------------------------------------------------------------T--TCCTACTATG---TTTCT------------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 6 I 12
s Ziphius_cavirostris.ZipCav_flattened_line_2431392            212 25 +       382 t-----------------------tcc---------------a---------------c-----tttctgc---t--t-----cttc---c---tc---c-----ct
i Ziphius_cavirostris.ZipCav_flattened_line_2431392      C 0 I 3
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        399 33 +     36723 TCCAGGCCT----C-----T----C--ACTAC-TAGAATTCGG---TCAATG
s Acinonyx_jubatus.LLWD01001279.1                           808959 25 +   1699592 T------------T-----T----C--ACTTC-TGGAATTTAA---TCAATG
i Acinonyx_jubatus.LLWD01001279.1                        I 12 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410721 25 +  29979442 t------------t-----t----c--ACTTC-TGGAATTTAA---TCAATG
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 12 C 0
s Ailurus_fulgens.LNAC01001112.1                            211640 25 +    347723 t------------t-----t----c--ccttc-tggaaTTTAA---GCAATG
i Ailurus_fulgens.LNAC01001112.1                         I 12 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43710 33 +     53615 TCCAGGCCT----C-----T----C--ACCGC-TAGAATTCGG---TCAATA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39525 33 +     44087 TCCAGGCCT----C-----T----C--ACCGC-TAGAATTCAG---TCAATA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68444 33 -     84148 TCCATGCCT----C-----T----C--ACCAC-TGAAACTCAG---TCAATA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40667 33 -     78289 TCCATGCCT----C-----T----C--ACCAC-TGGAACTCAG---TCAATA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40115 33 +     55831 TCCATGCCT----C-----T----C--ACCAC-TGGAACTCAG---TCAATA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38556 33 -     64179 TCCATGCCT----C-----T----C--ACCAC-TGGAACTCAG---TCAATA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20199 33 -     24835 TCCATGCCT----C-----T----C--ACCAC-TGGAACTCAG---TCAATA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37182 33 +     45454 TCCATGCCT----C-----T----C--ACCAC-TGGAACTCAG---TCAATA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42881 33 +     70886 TCCATGCCT----C-----T----C--ACCAC-TGGAACTCAG---TCAATA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5008 33 +     30854 TCCATGCCT----C-----T----C--ACCAC-TGGAACTCAG---TCAATA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29147 33 +     42133 TCCATGCCT----C-----T----C--ACCAC-TGGAACTCAG---TCAATA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583667 24 +   2318259 T------------C-----T----C--ACCAC-TGG-ATTTAA---TCAGTA
i Ammotragus_lervia.NIVO01071767.1                       I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172434 25 -    412891 T------------C-----T----T--ACCAC-TGGAATTTAA---GCAATA
i Anoura_caudifer.AnoCau_scaffold_1412                   I 8 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48766 24 -     68529 T------------C-----T----C--ACCAC-TGG-ATTTAA---TCAGTA
i Antilocapra_americana.AntAmePen_scaffold_21030         I 7 C 0
s Aotus_azarae.k141_118258                                   46958 31 -     65372 --CATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAATA
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40706 31 +     43593 --CATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAATA
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668716 31 +   5030052 --CATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAATA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20358 31 -     23494 --CATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAATA
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5494 31 +      8415 --CATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAATA
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11711  9 -     32367 TTCATCTCT-------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 8 I 5
s Arctocebus_calabarensis.k141_1364444                       15596 31 -     45910 TCCAACCCT----A-----A----A--ACCCCCTAGAATCC------CAACA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   274 25 -     15198 T------------C-----T----T--ACCAC-TGGAATTTAA---GCAATA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 8 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270942 33 +  21539123 TCCATGCCT----C-----T----C--ACCAC-TGGAACTCAG---TCAATA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7113 33 +     48076 TCCATGCCT----C-----T----C--ACCAC-TGGAACTCAG---TCAATA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2247 33 -     28759 TCCATGCCT----C-----T----C--ACCAC-TGGAACTCAG---TCAATA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29799 33 +     44353 TCCATGCCT----C-----T----C--ACCAC-TGGAACTCAG---TCAATA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45174 33 -     71267 TCCATGCCT----C-----T----C--ACCAC-TGGAACTCAG---TCAATA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19230 33 -     33135 TCCATGCCT----C-----T----C--ACCAC-TGGAACTCAG---TCAATA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2350 27 +     11645 TCCAAGTCT----C-----T----C--ACCAC-TGAAATCT------C---A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2352 27 -     19611 TCCAAGTCT----C-----T----C--ACCAC-TGAAATCT------C---A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955495 25 -  23207421 t------------c-----t----t--accac-tggaatttaa---tCAATA
i Balaenoptera_acutorostrata.KI537508.1                  I 3 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2703 25 -      4711 t------------c-----t----t--acCAC-TGGAATTTAA---TCAATA
i Balaenoptera_bonaerensis.DF507193.1                    I 3 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84664 24 +    124022 T------------C-----T----C--ACCAC-TGG-ATTTAA---TCAGTA
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 7 C 0
s Bison_bison.KN261452.1                                     20195 24 +    288883 t------------c-----t----c--aCCAC-TGG-CTTTAA---TCAGTA
i Bison_bison.KN261452.1                                 I 7 C 0
s Bos_indicus.CM003047.1                                  20354582 24 +  48749331 t------------c-----t----c--aCCAC-TGG-CTTTAA---TCAGTA
i Bos_indicus.CM003047.1                                 I 7 C 0
s Bos_mutus.JH880303.1                                      753150 24 +   1948126 t------------c-----t----c--aCCAC-TGG-CTTTAA---TCAGTA
i Bos_mutus.JH880303.1                                   I 7 C 0
s Bos_taurus.CM000203.6                                   27543289 24 -  45695690 t------------c-----t----c--aCCAC-TGG-CTTTAA---TCAGTA
i Bos_taurus.CM000203.6                                  I 7 C 0
s Bubalus_bubalis.KI419123.1                               1528311 24 -   4408762 t------------c-----t----c--ACCAC-TGG-CTTTAA---TCAGTA
i Bubalus_bubalis.KI419123.1                             I 7 C 0
s Cacajao_ayresi.k141_96119                                   4136 33 +     28062 TCTGTGCCT----C-----T----C--ACCAC-TGGGATTCGG---TCAATA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39431 33 -     91139 TCTGTGCCT----C-----T----C--ACCAC-TGGGATTCGG---TCAATA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16956 33 +     95584 TCTGTGCCT----C-----T----C--ACCAC-TGGGATTCGG---TCAATA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16869 33 +    119600 TCTGTGGCT----C-----T----C--ACCAC-TGGGATTTGG---TCAATA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              6051 31 -     13885 --CATGCCT----C-----T----C--ACCAC-CGGAATTCAG---TCAATA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14737 31 +     17162 --CAAGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAAGA
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449693 31 + 189096842 --CAAGCCT----C-----T----C--ACCAC-CGGAATTCAG---TCAAGA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              15986 31 -     18408 --CAAGCCT----C-----T----C--ACCAC-CGGAATTCAG---TCAAGA
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629492 25 +  17673402 t------------c-----t----c--aCCAC-TGGAACTTAA---TCAATA
i Camelus_bactrianus.KN276810.1                          I 8 C 0
s Camelus_dromedarius.KN272107.1                           4663778 25 +   7040546 t------------c-----t----c--ACCAC-TGGAACTTAA---TCAATA
i Camelus_dromedarius.KN272107.1                         I 8 C 0
s Camelus_ferus.KB017975.1                                 1207438 25 +   1652518 t------------c-----t----c--aCCAC-TGGAACTTAA---TCAATA
i Camelus_ferus.KB017975.1                               I 8 C 0
s CanFam4.chr16                                           42501170 25 +  60362399 T------------T-----T----C--GCTTC-TGGAATTTAA---TCAATA
i CanFam4.chr16                                          I 12 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4800 25 -     23171 T------------T-----T----C--GCTTC-TGGAATTTAA---TCAATA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 12 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218161 25 +   9314153 T------------T-----T----C--GCTTC-TGGAATTTAA---TCAATA
i Canis_lupus_dingo.QKWQ01000480.1                       I 12 C 0
s Canis_lupus_familiaris.chr16                            41611286 25 +  59632846 T------------T-----T----C--GCTTC-TGGAATTTAA---TCAATA
i Canis_lupus_familiaris.chr16                           I 12 C 0
s Canis_lupus_orion.HG994398.1                            45102856 25 -  63665305 T------------T-----T----C--GCTTC-TGGAATTTAA---TCAATA
i Canis_lupus_orion.HG994398.1                           I 12 C 0
s Capra_aegagrus.CM003241.1                               27407378 24 -  46296322 T------------C-----T----C--ACCAC-TGG-ATTTAA---CCAGTA
i Capra_aegagrus.CM003241.1                              I 4 C 0
s Capra_hircus.CM004588.1                                 26589651 24 +  44709034 T------------C-----T----C--ATCAC-TGG-ATTTAA---TCAGTA
i Capra_hircus.CM004588.1                                I 4 C 0
s Carlito_syrichta.NW_007259797.1                           265483 32 +    496798 ttcatctct----c-----t----C--ACTAC-TGGAATTCAG---CCAA-G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                320 25 +      5315 T------------C-----T----T--ACCAC-TGGCATTTAA---GCAATA
i Carollia_perspicillata.CarPer_scaffold_170178          I 8 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75137 29 -    217609 T--------TCCCC-----T----C--ACCAC-TAGAATTTAA---TCGATA
i Catagonus_wagneri.CatWag_scaffold_2839                 I 3 C 0
s Cebuella_niveiventris.k141_592277                           1271 31 -     12580 --CATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAAGA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39157 31 +     53515 --CATGCCT----C-----T----C--ACCAC-CGGAATTCAG---TCAAGA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367389 31 -  26074798 --CATGCGT----C-----T----C--ACCAC-TGGAATTCAA---TCAGTA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4278 31 -     34880 --CATGCGT----C-----T----C--ACCAC-TGGAATTCAA---TCAGTA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63373 31 -     89041 --CATGCGT----C-----T----C--ACCAC-TGGAATTCAA---TCAGTA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13763 32 -     50533 TTCATCTCT----C-----T----C--ACTAC-TGGAATTCAG---CCAA-G
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488371 25 -  27778364 t------------c-----t----c--atCCT-TGGAATTTAA---TCAATA
i Ceratotherium_simum.JH767749.1                         I 11 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15204 25 +     27315 T------------C-----T----C--ATCCT-TGGAATTTAA---TCAATA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 11 C 0
s Cercocebus_atys.KQ010504.1                                136870 33 -   4669795 TCCAGGCTT----C-----T----C--ACCGC-Tagaattcag---tccata
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40611 33 +     47900 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCCATA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40443 33 -     44860 TCCAGGCTT----C-----T----C--ACCGC-TAGAATTCAG---TCCATA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40425 33 -    148725 TCCAGGCTT----C-----T----C--ACCGC-TAGAATTCAG---TCCATA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23411 33 -     40656 TCCAGGCCT----C-----T----C--ACCAC-TAGAATTCGG---TCGATA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3419 33 +     20796 TCCAGGCCT----C-----T----C--ACCGC-TAGAATTCGG---TAGATA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7674 33 -     17524 TCCAGGCCT----C-----T----C--ACTGC-TAGAAATCAG---TCAATA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23366 33 -     34525 TCCAGGCCT----C-----T----C--GCCGC-TAGAATTCGG---TCGATA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8086 33 -     25376 TCCAGGCCT----C-----T----C--ACCGC-TAGAATTCGG---TCGATA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360563 33 -  39242232 TCCAGGCCT----C-----T----C--ACCGC-TAGAATTCAG---TCAATA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266391 33 +  21565898 CCCAGGCCT----C-----T----C--ACCGC-TAGAATTCAG---TCAATA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27837 33 -     45857 TCCAGGCCT----C-----T----C--ACCGC-TAGAATTCGG---TCAATA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23628 33 -     32606 TCCAGGCCT----C-----T----C--ACCGC-TAGAATTCAG---TCAATA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27277 33 +     27662 TCCAGGCCT----C-----T----C--ACCGC-TAGAATTCGG---TCGATA
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21327 33 +     70610 TCCAGGCCT----C-----T----C--ACCGC-TAGAATTCAG---TCAATA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18192 33 +     36323 TCCAGGCCT----C-----T----C--ACCGC-TAGAAATCAG---TCAATA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             2797 32 -     19938 TCCCTTTCT----A-----T----C--ACCAC-TGGAATTT-A---TCAACA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 3 C 0
s Cheirogaleus_major.k141_666340                             26773 30 -     33796 TCCTACTGT----C-----T----C--ACCAC-TGAAATCT------CAACA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              968 30 -     15404 TCCTACTGT----C-----T----C--ACCAC-TGAAATCT------CAACA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5234 33 -     32913 CCCATACCT----C-----T----C--ACCGC-TGGAATTCAG---ACAATA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15647 33 -     40346 CCCATACCT----C-----T----C--ACCGC-TGGAATTCAG---ACAATA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15911 33 +    216457 CCCATACCT----C-----T----C--ACCGC-TGGAATTCAG---ACAATA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15690 33 +     39636 CCCATACCT----C-----T----C--ACCGC-TGGAATTCAG---ACAATA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16729 33 -     17061 TCCATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAATA
i Chiropotes_albinasus.k141_2737257                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38775 33 -    112038 TCTGTGCCT----C-----T----C--ACCAC-TGGGATTCGG---TCAATA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4347 33 +     34062 TCTGTGCCT----C-----T----C--ACCAC-TGGGATTCGG---TCAATA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339090 33 +  18827391 TCCAGGCCT----C-----T----C--ACCGC-TAGAATTCAG---TCAATA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5694 33 -     44032 TCCAGGCCT----C-----T----C--ACCGC-TAGAATTCAG---TCAATA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300416 33 - 135778131 TCCAGGCCT----C-----T----C--ACCGC-TAGAATTCAG---TCAATA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                  9610 33 +     15858 TCCCTTTCC----C-----T----T--GCCAT-TGGAATTT-A--GTCAACA
i Choloepus_didactylus.ChoDid_scaffold_70559             I 3 C 0
s Choloepus_hoffmanni.KN194906.1                            601186 33 -    839153 tccctttcc----c-----t----t--gcCAT-TGGAATTT-A--GTCAACA
i Choloepus_hoffmanni.KN194906.1                         I 3 C 0
s Colobus_angolensis.KN981557.1                             404947 33 -   2368649 TCCAGGCCT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374137 33 - 200372422 TCCAGGCCT----C-----T----C--ACCAC-TAGAATTCAG---TCAGTA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4831 33 -      6605 TCCAGGCCT----C-----T----C--ACCAC-TAGAATTCAG---TCAGTA
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803262 29 +  53390261 T------------C-----TTAGTC--GCCAC-TGGAATTTAA---TCAATA
i Condylura_cristata.JH655891.1                          I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8682 25 +     10921 T------------C-----T----C--ACTCC-TGGAATTTAA---GCAATA
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               197 25 +     87169 T------------T-----T----C--ACTTC-TGGAATTTAA---TCAGTG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 10 C 0
s Dasypus_novemcinctus.JH564415.1                          2087862 32 -   2246927 TCACTTTTT----A-----T----C--ACCAC-AGGAATTT-A---TCAACA
i Dasypus_novemcinctus.JH564415.1                        I 3 C 0
s Daubentonia_madagascariensis.ctg71                        288795 25 +  12879189 TCCAACTCT----C-----T----C--ACCAC-TGAAATCT-----------
i Daubentonia_madagascariensis.ctg71                     C 0 I 2
s Delphinapterus_leucas.KZ290073.1                        18623823 25 -  35494412 t------------c-----t----t--acCAC-TGGAATTTAA---TCAATA
i Delphinapterus_leucas.KZ290073.1                       I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660658 25 -   1390856 T------------C-----T----C--ATCCT-TGGAATTGAA---TCAATA
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 11 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135450 25 -    198055 T------------C-----T----C--ATCCT-TGGAATTTAA---TCAATA
i Diceros_bicornis.DicBicMic_scaffold_5955               I 11 C 0
s Eidolon_helvum.AWHC01266696.1                               2023 25 +     19438 T------------C-----T----C--ACCAC-TGGAATTTAC---TCAGAA
i Eidolon_helvum.AWHC01266696.1                          I 3 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238054 24 -    607251 T------------C-----T----C--ACCAC-TGG-ATTTAA---TCAGTA
i Elaphurus_davidianus.JRFZ01104969.1                    I 4 C 0
s Enhydra_lutris.KZ291758.1                               24906179 25 +  41312741 t------------t-----t----c--ccttc-tggaaTTTAA---TCAATG
i Enhydra_lutris.KZ291758.1                              I 12 C 0
s Eptesicus_fuscus.JH977646.1                             12573590 22 +  14770903 ------------------------T--AGCAC-TGGAATTTAA---GCAATA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037615 25 -   4378816 t------------t-----t----c--acGTC-TGGAATTGCA---TCAAAA
i Equus_asinus.JREZ01000139.1                            I 11 C 0
s Equus_caballus.CM000403.2                               21371549 25 +  39960074 t------------t-----t----c--acTTC-TGGAATTGCA---TCAAAA
i Equus_caballus.CM000403.2                              I 11 C 0
s Equus_przewalskii.KK951119.1                              408335 25 -    498745 t------------t-----t----c--acttc-tgGAATTGCA---TCAAAA
i Equus_przewalskii.KK951119.1                           I 11 C 0
s Erythrocebus_patas.Contig38                               258646 33 +  21539334 TCCAGGCCT----C-----T----T--ACCGC-TAGAATTCAG---TCGATA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63374 25 -    133382 t------------c-----t----t--accac-tggaatttaa---tCAATA
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 3 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3590 25 +      7672 t------------c-----t----t--accac-tggaatttaa---tCAATA
i Eubalaena_japonica.EubJap_flattened_line_118172        I 3 C 0
s Eulemur_albifrons.k141_51491                               11752 30 -     24895 ttcaactct----c-----t----c--ACCAC-TGAAATCT------CAACA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39464 30 -     70999 ttcaactct----c-----t----c--ACCAC-TGAAATCT------CAACA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83424 30 +    112731 ttcaactct----c-----t----c--ACCAC-TGAAATCT------CAACA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             39996 30 +     68309 ttcaactct----c-----t----c--ACCAC-TGAAATCT------CAACA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50321 30 -     65740 TTCAACTCT----C-----T----C--ACCAC-TGAAATCT------CAACA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20951 30 -     75513 TTCAACTCT----C-----T----C--ACCAC-TGAAATCT------CAACA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45144 30 -     97555 TTCAACTCT----C-----T----C--ACCAC-TGAAATCT------CAACA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1869 30 +     30972 TTCAACTCT----C-----T----C--ACCAC-TGAAATCT------CAACA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39594 30 -     52037 ttcaactct----c-----t----c--ACCAC-TGAAATCT------CAACA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              55995 30 -    111500 ttcaactct----c-----t----c--ACCAC-TGAAATCT------CAACA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242618 25 - 206538554 T------------T-----T----C--ACTTC-TGGAATTTAA---TCAATG
i Felis_catus.CM001381.2                                 I 12 C 0
s Felis_catus_fca126.CM031415.1                          185112400 25 - 205367284 T------------T-----T----C--ACTTC-TGGAATTTAA---TCAATG
i Felis_catus_fca126.CM031415.1                          I 12 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23748 25 -     30238 T------------T-----T----C--ACTTC-TGGAATTTAA---TCAATG
i Felis_nigripes.FelNig_flattened_line_31944             I 12 C 0
s Galago_moholi.ctg3793                                     119178 30 -    137831 TCCAACCCT----C-----T----C--ACCCC-TAGAATCT------CAATG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             2718 30 +     22493 TCCAACCCT----C-----T----C--ACCCC-TAGAATCT------CAACG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            14911 30 -     32986 TCCAACCCT----C-----T----C--ACCCC-TAGAATCT------CAACG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14956 33 +     18121 TCTATCTCT----T-----T----C--ACCAC-TGGAATTTAG---TCAATA
i Galeopterus_variegatus.GalVar_scaffold_74466           I 3 I 1
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89732 24 -     95226 t------------c-----t----c--aCCAC-TGG-ATTTAA---TCAGTA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 7 C 0
s Gorilla_beringei.k141_3358224                                757 33 -      1229 TCCAGGCCT----C-----T----C--ACTAC-TAGAATTCGG---TCAATG
i Gorilla_beringei.k141_3358224                          I 18 I 1
s Gorilla_gorilla.LT578341.1                                250251 33 - 186649187 TCCAGGCCT----C-----T----C--ACTAC-TAGAATTCGG---TCAATG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11685 30 -     40692 TTCAACTCT----C-----T----C--ACCAC-TGAAATCT------CAACA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33087 30 +     49394 ttcaactct----c-----t----c--ACCAC-TGAAATCT------CAACA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57955 30 -     66874 ttcaactct----c-----t----c--ACCAC-TGAAATCT------CAACA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6832 30 -     42923 TTCAACTCT----C-----T----C--ACCAC-TGAAATCT------CAACA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13828 30 -     53142 TTCAACTCT----C-----T----C--ACCAC-TGAAATCT------CAACA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26512 25 -    327341 T------------T-----T----C--ACTTC-TGGAATTTAA---TCAGTG
i Helogale_parvula.HelPar_flattened_line_2585            I 10 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7482 24 +     48891 T------------C-----T----C--ACCAC-TGG-ATTTAA---TCAGTA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 4 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                10967 33 +     12639 TTTCTCTCC----C-----T----C--ACTGT-TGGAATTT-A-A-TCGGCA
i Heterohyrax_brucei.HetBruBak_scaffold_99956            I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6074 25 -     36432 t------------c-----t----c--accac-tggaatttaa---tCAACA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 3 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545922 25 -   1711038 T------------C-----T----C--ACCAC-TGGAATATAA---GCAATA
i Hipposideros_armiger.JXIK01000431.1                    I 3 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45230 25 +     49977 T------------C-----T----C--ACCAC-TGGAATATAA---GCAATA
i Hipposideros_galeritus.HipGal_scaffold_23202           I 3 C 0
s Hoolock_leuconedys.ctg274                                    138151 33 -    630532 TCCAGGCCT----C-----T----C--ACTAC-TAGAATTCAG---TCAATA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  64681 21 +     83186 C------------T-----T----C--ACTTC-TGAAACTTAA---T----G
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 10 C 0
s Hylobates_agilis.k141_1155965                               1179 33 +     12352 TCCAGCCCT----C-----T----C--ACTAC-TAGAATTCAG---TCAATA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8362 33 +     55766 TCCAGCCCT----C-----T----C--ACTAC-TAGAATTCAG---TCAATA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047706 33 + 191637585 TCCAGCCCT----C-----T----C--ACTAC-TAGAATTCAG---TCAATA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797038 33 +  11177569 TCCAGCCCT----C-----T----C--ACTAC-TAGAATTCAG---TCAATA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375098  9 +   7955117 ttcatctct-------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 5
s Indri_indri.k141_2435083                                    1032 30 +      1070 TCCAACTCT----C-----T----C--ACCAC-TGAAATCT------CAAGA
i Indri_indri.k141_2435083                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1610 25 -     16823 t------------c-----t----t--accAA-TGGAATTTAA---TCAATA
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 3 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64099 25 -     97402 T------------C-----T----T--ACCAC-TGGAATTTAA---TCAATA
i Kogia_breviceps.KogBre_flattened_line_3970             I 2 C 0
s Lagothrix_lagothricha.k141_246028                          39489 33 +    110728 TCCATGCCT----C-----T----C--ACCAC-TGGAACTCAG---TCAATA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59099 22 -     65777 ------------------------C--AGCAC-TGGAATTTAA---GCAATA
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756477 30 +  30322482 ttcaactct----c-----t----c--ACCAC-TGAAATCT------CAACA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3469711                        5142 31 -      5330 --CATGCCT----C-----T----C--ACCAC-TGAAATTCAG---TCAATA
i Leontocebus_fuscicollis.k141_3469711                   C 0 N 0
s Leontocebus_illigeri.k141_2813249                          16580 31 -     16762 --CATGCCT----C-----T----C--ACCAC-TGAAATTCAG---TCAATA
i Leontocebus_illigeri.k141_2813249                      C 0 N 0
s Leontocebus_nigricollis.k141_5626589                       16878 31 -     17065 --CATGCCT----C-----T----C--ACCAC-TGAAATTCAG---TCAATA
i Leontocebus_nigricollis.k141_5626589                   C 0 N 0
s Leontopithecus_chrysomelas.k141_1327670                     6400 31 -     11567 --CATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAACA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7781 31 -     12945 --CATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAACA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5131 33 +     29618 TCCTACTCT----C-----T----C--ACCAC-TGAAATCT--CAA-CAACA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5130 33 +     31569 TCCTACTCT----C-----T----C--ACCAC-TGAAATCT--CAA-CAACA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5136 33 +     24756 TCCTACTCT----C-----T----C--ACCAC-TGAAATCT--CAA-CAACT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5135 33 +     16388 TCCTACTCT----C-----T----C--ACCAC-TGAAATCT--CAA-CAACA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809271 25 -   3914936 t------------t-----t----c--ccttc-tggaATTTAA---TCAGTG
i Leptonychotes_weddellii.KB714746.1                     I 12 C 0
s Lipotes_vexillifer.KE559953.1                             333133 25 +    662738 t------------c-----t----t--accac-tggaatttaa---tCAATA
i Lipotes_vexillifer.KE559953.1                          I 3 C 0
s Lophocebus_aterrimus.ctg367                               328826 33 -   1826925 TCCAGGATT----C-----T----C--ACCGC-TAGAATTCAG---TCAATA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2156 30 +     19643 TCCAACACT----C-----T----C--ACCTC-TAGAATCT------CAACA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5035814 30 -   6120653 TCCAACACT----C-----T----C--ACCTC-TAGAATCT------CAACA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39076133 33 +  43346337 tccctctcc----c-----t----t--accaC-TGGAATTT-A--GCCAGCA
i Loxodonta_africana.GL010049.1                          I 3 C 0
s Lycaon_pictus.CM007581.1                                41610441 25 +  59628241 T------------T-----T----C--GCTTC-TGGAATTTAA---TCAATA
i Lycaon_pictus.CM007581.1                               I 12 C 0
s Macaca_arctoides.k141_1757516                              41107 33 -     61512 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368735 33 -  60120075 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21054 33 +     30207 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18157 33 -     24934 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20941 33 +     30527 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32130 33 -     50087 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41868 33 +     51645 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410442 33 - 187317192 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395325 33 +  25927173 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44457 33 -     62418 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21144 33 +     24253 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40901 33 +     59329 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266733 33 +    668171 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18079 33 +     21031 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31811 33 +     33478 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219095 25 -    270270 T------------C-----T----C--ACCAG-TGGAATTTAA---GCAGTA
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 3 C 0
s Mandrillus_leucophaeus.scaffold280                        318209 33 +  24302211 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCCATA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353041 33 -    752769 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCCATA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669830 25 -    737560 T------------C-----T----C--ATCTC-TGGAATTTAA---TCAACA
i Manis_javanica.JSZB01003497.1                          I 12 C 0
s Manis_pentadactyla.KN006162.1                             217124 25 +    317179 T------------C-----T----C--ATCTC-TGGAATTTAA---TCAACA
i Manis_pentadactyla.KN006162.1                          I 12 C 0
s Marmota_marmota.CZRN01000018.1                           7489191  9 +  40650429 ttcatctct-------------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 5
s Megaderma_lyra.MegLyr_scaffold_4542                       146173 24 +    207569 T------------C-----T----C--ACCAC-TGG-GTTTAA---GCAATA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14191 25 -     74585 T------------T-----T----C--CCTTC-TGGAATTTAA---TCAATG
i Mellivora_capensis.MelCap_flattened_line_19308         I 12 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79677 25 +     93471 t------------c-----t----t--accac-tggaatttaa---tCAATA
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 3 C 0
s Mico_argentatus.k141_582562                                 6159 31 +     17804 --CAAGCCT----C-----T----C--ACCAC-CGGAATTCAG---TCAAGA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6932 31 -     12984 --CAAGCCT----C-----T----C--ACCAC-CGGAATTCAG---TCAAGA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14894 31 -     26561 --CAAGCCT----C-----T----C--ACCAC-CGGAATTCAG---TCAAGA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980736 30 +  93316391 TCCTACTCT----C-----T----C--ACCAC-TGAAGTCT------CAACA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180409 25 +    200668 T------------C-----T----T--ACCAC-TGGGATTTAA---GCAATA
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 8 C 0
s Miopithecus_ogouensis.k141_1534655                         18120 33 -     27822 TCCAGGCCT----C-----T----C--ACCGC-TAGAATTCAG---TCAATA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4287 25 +     27589 T------------T-----T----C--CCTTC-TGGAATTTAA---TCAATG
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 12 C 0
s Mirza_zaza.k141_766280                                     48597 30 -     62432 TCCTACTCT----C-----T----C--ACCAC-TGAAATCT------CAACA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351566 25 +    437263 T------------C-----T----T--ACCAC-TGGAATTTAA---TCAATA
i Monodon_monoceros.MonMon_M_scaffold_103                I 3 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174579 25 +    366855 T------------C-----T----T--ACCAC-TGGAATTTAA---GCAATA
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 8 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22637 24 -     82753 T------------C-----T----C--ACCAC-TGG-ATCTAA---TCAGTA
i Moschus_moschiferus.MosMos_scaffold_13123              I 7 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14281 25 -     63510 T------------T-----T----C--ACTTC-TGGAATTTAA---TCAGTG
i Mungos_mungo.MunMun_flattened_line_18455               I 10 C 0
s Murina_feae.MurFea_scaffold_17764                          33513 22 +     47283 ------------------------T--AGCAC-TGGAATTTAA---GCAATA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343235 25 +  14710649 t------------t-----t----c--ccttc-tggaaTTTAA---TCAATG
i Mustela_putorius.JH418006.1                            I 12 C 0
s Myotis_brandtii.KE162005.1                               9787946 22 +  10118263 ------------------------T--AGCAC-TGGAATTTAA---GCAATA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378357 22 +   6019432 ------------------------T--AGCAC-TGGAATTGAA---GCAATA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18570 22 -     39439 ------------------------T--AGCAC-TGAAATTTAA---GCAATA
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1896 22 +      3929 ------------------------T--AGCAC-TGGAATTTAA---GCAATA
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              109766 33 +    130748 TCCCTTTCC----C-----T----C--ATCAC-TGTACTTT-A--GTCAACA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 3 C 0
s Nasalis_larvatus.k141_1350636                              24485 33 +     34575 TCCAGGCCT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464683 25 -  31847680 t------------t-----t----c--ccttc-tggAATTTAA---TCAATG
i Neomonachus_schauinslandi.NINY01007730.1               I 12 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225735 25 -   7148211 t------------c-----t----t--acCAC-TGGAATTTAA---TCAATA
i Neophocaena_asiaeorientalis.KZ687982.1                 I 3 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122784 27 -    149072 G------------C-----T----TAAACCAC-TGGGATTTAA---GCAATC
i Noctilio_leporinus.NocLep_scaffold_7894                I 3 C 0
s Nomascus_annamensis.k141_1771965                           49436 33 -    132029 TCCAGGCCT----C-----T----C--ACTAC-TAGAATTCAG---TCAATA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5532 33 -     16345 TCCAGGCCT----C-----T----C--ACTAC-TAGAATTCAG---TCAATA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11415 33 +     22201 TCCAGGCCT----C-----T----C--ACTAC-TAGAATTCAG---TCAATA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409752 33 -  22158432 TCCAGGCCT----C-----T----C--ACTAC-TAGAATTCAG---TCAATA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21815 33 -     54323 TCCAGGCCT----C-----T----C--ACTAC-TAGAATTCAG---TCAATA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194057 25 +   9404916 T------------T-----T----C--GCTTC-TGGAATTTAA---TCAATA
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 12 C 0
s Nycticebus_bengalensis.LG01                             93630929 30 + 196305487 TCCAACCCT----C-----T----C--ACCTC-TAGAATCT------CAACA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              318 30 +      2758 TCCAACCCT----C-----T----C--ACCTC-TAGAATCT------CAACA
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559209 30 - 199412804 TCCAACCCT----C-----T----C--ACCTC-TAGAATCT------CAACA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447453 25 +   2017862 t------------t-----t----c--ccttc-tggaaTTTAA---TCAATG
i Odobenus_rosmarus.KB229312.1                           I 12 C 0
s Odocoileus_virginianus.KZ100018.1                         434625 24 -    630418 T------------C-----T----C--ACCAC-TGG-ATTTAA---TCAGTA
i Odocoileus_virginianus.KZ100018.1                      I 4 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12616 24 +    150152 t------------c-----t----c--accac-cgg-atttaa---tcagta
i Okapia_johnstoni.LVCL01S0005463.1                      I 7 C 0
s Orcinus_orca.KB316932.1                                  8095005 25 +  10937097 t------------c-----t----t--acCAC-TGGAATTTAA---TCAATA
i Orcinus_orca.KB316932.1                                I 3 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35126 21 +    559221 ---------------------------ACTTC-TGGAATTTAA---TCAATA
i Otocyon_megalotis.JAEUCK010005147.1                    I 15 C 0
s Otolemur_crassicaudatus.k141_85057                         22454 30 -     23432 TCCAACCCT----C-----T----C--ACCCC-TAGAATCT------CAACA
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347019 30 +   1103335 TCCAACCCT----C-----T----C--ACCCC-TAGAATCT------CAaca
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402602 24 -  44047080 T------------C-----T----C--ACCAC-TGG-ATTTAA---TCAGTA
i Ovis_aries.CM001607.2                                  I 4 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3121 24 +     17875 T------------C-----T----C--ACCAC-TGG-ATTTAA---TCAGTA
i Ovis_canadensis.OviCan_scaffold_67953                  I 4 C 0
s Pan_troglodytes.CM009242.2                               1467639 33 - 189151597 TCCAGGCCT----C-----T----C--ACTAC-TAGAATTCGG---TCAATG
i Pan_troglodytes.CM009242.2                             I 18 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20336 25 -    230217 T------------T-----T----C--ACTTC-TGGAATTTAA---TCAATG
i Panthera_onca.PanOnc_flattened_line_3271               I 12 C 0
s Panthera_pardus.KV860321.1                              18457662 25 -  18783137 T------------T-----T----C--ACTTC-TGGAATTTAA---TCAATG
i Panthera_pardus.KV860321.1                             I 12 C 0
s Panthera_tigris.KE722367.1                               3968391 25 +   8748460 T------------T-----T----C--ACTTC-TGGAATTTAA---TCAATG
i Panthera_tigris.KE722367.1                             I 12 C 0
s Pantholops_hodgsonii.KE114653.1                          1614048 24 +   2937107 T------------C-----T----C--ACCAC-TGG-ATTTAA---TCAGTA
i Pantholops_hodgsonii.KE114653.1                        I 4 C 0
s Papio_anubis.CM001495.2                                   239053 33 - 183742232 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5520 33 +     21308 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286557 33 -  20919399 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18173 33 -     27687 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11309 33 +     16796 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18119 33 -     23640 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11253 25 +     78924 T------------T-----T----C--ACTTC-TGAAATTTAA---TCAATG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 11 C 0
s Perodicticus_ibeanus.k141_1921260                          21018 30 +     31479 TCCAACCCT----C-----T----C--ACCCC-TAGAATCC------CAACA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13389 30 -     24908 TCCAACCCT----C-----T----C--ACCCC-CAGAATCC------CAACA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10863 25 -     15039 T------------C-----T----T--ACCAC-TGGAATTTAA---TCAATA
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 3 C 0
s Piliocolobus_badius.k141_2495623                            4939 33 +      7560 TCCAGGCCT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60646 33 -     63152 TCCAGGCCT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43245 33 +     45295 TGCAGGCCT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     924 33 +      5735 TCCAGGCCT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45784 22 +     46691 ------------------------T--ATCAC-TGGAATTTAA---GCAATA
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61125 33 +    207309 TCCGTGCCT----C-----T----C--ACCAC-TGGGATTCGG---TCAATA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2245 33 -     25401 TCCGTGCCT----C-----T----C--ACCAC-TGGGATTCGG---TCAATA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27960 33 +     58159 TCCGTGCCT----C-----T----C--ACCAC-TGGGATTCGG---TCAATA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28236 33 +     63561 TCCGTGCCT----C-----T----C--ACCAC-TGGGATTCGG---TCAATA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           27999 33 +     51148 TCCGTGCCT----C-----T----C--ACCAC-TGGGATTCGG---TCAATA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              552992 33 -   4542175 TCCGTGCCT----C-----T----C--ACCAC-TGGGATTCGG---TCAATA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           27983 33 +     51125 TCCGTGCCT----C-----T----C--ACCAC-TGGGATTCGG---TCAATA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2947 25 -      8168 t------------c-----t----t--accAC-TGGAATTTAA---TCAATA
i Platanista_gangetica.PlaMin_flattened_line_167872      I 3 C 0
s Plecturocebus_bernhardi.k141_2549090                        4416 33 +     39866 CCCATGCCT----C-----T----G--ACCAC-TGGAATTCGG---TCAATA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       38904 33 -     87950 CCCATGCCT----C-----T----G--ACCAC-TGGAATTCGG---TCAATA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39297 33 -     88961 CCCATGCCT----C-----T----G--ACCAC-TGGAATTCGG---TCAATA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          3997 33 -     39403 CCCATGCCT----C-----T----G--ACCAC-TGGAATTCAG---TCAATA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          38950 33 +     87928 CCCATGCCT----C-----T----G--ACCAC-TGGAATTCAG---TCAATA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          3994 33 -     60166 CCCATGCCT----C-----T----G--ACCAC-TGGAATTCGG---TCAATA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10930 33 -     67232 CCCATGCCT----C-----T----G--ACCAC-TGGAATTCGG---TCAATA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38846 33 -     90634 CCCATGCCT----C-----T----G--ACCAC-TGGAATTCGG---TCAATA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40314 33 +     89403 CCCATGCCT----C-----T----G--ACCAC-TGGAATTCGG---TCAATA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173256 33 - 189387572 TCAAGGACT----C-----T----C--ACTAC-TAGAATTCAG---TCAATG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188254 33 -   9816681 TCAAGGACT----C-----T----C--ACTAC-TAGAATTCAG---TCAATG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23425 33 +     69807 TCCAGGCCT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40620 33 -     80239 TCCAGGCCT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8124 33 +     14086 TCTCTCTCC----C-----T----C--ACTGT-TGGAATTT-A--GTCGGCA
i Procavia_capensis.ProCapCap_scaffold_121686            I 1 C 0
s Prolemur_simus.MPIZ01000396.1                            1979635 30 +   4620579 ttCAACTCT----C-----T----C--ACCAC-TGAAATCT------CAACA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562215 27 -   2598838 tccaACTCT----C-----T----C--ACCAC-TGAAATCT------C---A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79302 27 -     79582 TCCAACTCT----C-----T----C--ACCAC-TGAAATCT------C---A
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              457 27 -     11706 TCCAACTCT----C-----T----C--ACCAC-TGAAATCT------C---A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4192 27 -     30655 TCCAACTCT----C-----T----C--ACCAC-TGAAATCT------C---A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30517 27 +     46564 TCCAACTCT----C-----T----C--ACCAC-TGAAATCT------C---A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90808 27 -     98465 tccaactct----c-----t----c--accAC-TGAAATCT------C---A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4430 27 +     35169 TCCAACTCT----C-----T----C--ACCAC-TGAAATCT------C---A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47656 25 -     66298 T------------C-----T----T--ACCAC-TGGAATTTGA---GCGAGA
i Pteronotus_parnellii.KE847780.1                        I 7 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4330 25 -     10349 T------------T-----T----C--CCTTC-TGGAGTTTAA---TCAATG
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 12 C 0
s Pteropus_alecto.KB030862.1                               5836568 25 -  28871421 T------------C-----T----C--ACCAC-TGGAATTTAA---GCGGTa
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Pteropus_vampyrus.KN525825.1                             3533143 25 -   4952924 T------------C-----T----C--ACCAC-TGGAATTTAA---GCAGTA
i Pteropus_vampyrus.KN525825.1                           I 3 C 0
s Puma_concolor.QAVW01001104.1                            18095214 25 +  38429054 T------------T-----A----C--ACTTC-TGGAATTTAA---TCAATG
i Puma_concolor.QAVW01001104.1                           I 12 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51582 24 +     55069 T------------C-----T----C--ACCAC-TGG-ATTTAA---TCAGTA
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 4 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909217 25 +   3329780 T------------C-----T----C--ACCAC-TGGAAATTAA---GCAATA
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 C 0
s Rhinopithecus_bieti.k119_221883                            24643 33 +     27361 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118002 33 + 195417433 TCCAGGCCT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232251 33 -   7961872 TCCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70613 25 -    116970 T------------C-----T----C--ACCAC-TGGAATTTAC---GCAGTA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 3 C 0
s Saguinus_bicolor.k141_1125626                              16634 31 +     16959 --CATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAATA
i Saguinus_bicolor.k141_1125626                          C 0 N 0
s Saguinus_geoffroyi.k141_2310874                            38484 31 +     72255 --CATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAATA
i Saguinus_geoffroyi.k141_2310874                        C 0 N 0
s Saguinus_imperator.k141_1164420                            11125 31 +     11432 --CATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAATA
i Saguinus_imperator.k141_1164420                        C 0 N 0
s Saguinus_inustus.k141_2555509                              16499 31 -     16755 --CATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAATA
i Saguinus_inustus.k141_2555509                          C 0 N 0
s Saguinus_labiatus.k141_3072636                             15070 31 -     15289 --CATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAATA
i Saguinus_labiatus.k141_3072636                         C 0 N 0
s Saguinus_midas.LG03                                       387066 31 - 209938924 --CATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAATA
i Saguinus_midas.LG03                                    C 0 I 317
s Saguinus_mystax.k141_2237965                                7930 31 +     22212 --CATGCCT----C-----T----C--ACCAC-TGGAATTCAG---TCAATA
i Saguinus_mystax.k141_2237965                           C 0 I 316
s Saguinus_oedipus.k141_1808308                              16428 31 +     39756 --CATGCCT----C-----T----C--ACCAT-GGGAATTCAG---TCAATA
i Saguinus_oedipus.k141_1808308                          C 0 N 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6188 27 +     16473 T------------C-----TTCG-C--ACCGC-TGG-ATTTAA---TCAGTA
i Saiga_tatarica.SaiTat_scaffold_39512                   I 4 C 0
s Sapajus_apella.ctg103                                     234613 31 +   5703754 --CACGCGT----C-----T----C--ACCAC-TGGAATTCAG---TCAGTA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4203 31 +     21866 --CACGCGT----C-----T----C--ACCAC-TGGAATTCAG---TCAGTA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112317 29 +    313613 T------------C-----TCATTC--ACCAC-TGGAATTTAA---TCAACA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 C 0
s Semnopithecus_entellus.k141_158471                         21133 33 +     27374 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24648 33 +     58920 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11145 33 -     45317 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18802 33 -     42441 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21484 33 -     29113 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24556 33 -     48123 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854310 30 -   1910179 T------------CTCTTGT----C--ACTAC-TGGAATTTAA---TCACTA
i Solenodon_paradoxus.SolPar_flattened_line_126          I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1855475  9 +   3870691 ttcatctct-------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 5
s Spilogale_gracilis.SpiGra_flattened_line_13525              2187 22 -     97271 T------------T-----T----C--CC----TGGAATTTAA---TCAATG
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 9 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120880 25 +    196729 T------------T-----T----C--ACTTC-TGGAATTTAA---TCAGTG
i Suricata_suricatta.SurSur_flattened_line_6629          I 10 C 0
s Sus_scrofa.CM000828.4                                    6639602 29 +  69701581 t--------tcccc-----t----c--tccac-tAGAATTTAA---TCGATA
i Sus_scrofa.CM000828.4                                  I 3 C 0
s Symphalangus_syndactylus.tarseq_199                       386728 33 +   1523678 TCCAGCCCT----C-----T----C--ACTAC-TAGAATTCAG---TCAATA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                24718 33 -     25844 TCCCTTTCC----C-----T----C--ATCAC-TGTACTTT-A--GTCAATA
i Tamandua_tetradactyla.TamTet_scaffold_67439            I 3 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187393 25 +    199430 t------------c-----t----c--acctc-tggaatttaa---tcaata
i Tapirus_indicus.TapInd_scaffold_7432                   I 11 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101348 25 -    539355 T------------C-----T----C--ACCTC-TGGAATTTAA---TCAATA
i Tapirus_terrestris.TapTer_scaffold_755                 I 11 C 0
s Tarsius_lariang.k141_1780720                                3096 32 +      6850 TTCATCTCT----C-----T----C--ACTAC-TGGAATTCAG---CCAA-G
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3180 32 +     20590 TTCATCTCT----C-----T----C--ACTAC-TGGAATTCAG---CCAA-G
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349038 33 - 186847797 TTCAGGCTT----C-----T----C--ACCAC-TAGAATTCAG---TCAATA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                    9793 32 -     31044 TCCCTTCCT----G-----T----C--ACCAC-TGGAATTT-A---TCAACA
i Tolypeutes_matacus.TolMat_scaffold_31955               I 3 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475458 25 -    610378 T------------C-----T----T--ACCAC-TGGAATTTAA---GCAATA
i Tonatia_saurophila.TonSau_scaffold_294                 I 8 C 0
s Trachypithecus_auratus.k141_1189070                        16697 33 +     26378 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29378 33 -     78344 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16018 33 +     25722 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24241 33 -     62838 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24360 33 +     46913 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5168 33 -     28527 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26180 33 -     64340 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24217 33 -     63452 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5659 33 +     22490 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3279 33 +      4141 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6085 33 -     13050 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251321 33 -   6242583 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57054 33 +     59866 TCCAGGCCT----C-----T----C--ACCAC-TAGAAGTCAG---TCAATA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478790 33 -  10818551 tccctctcc----c-----t----t--accaC-TGGAATTT-A--GTCAGCA
i Trichechus_manatus.JH594705.1                          I 3 C 0
s Tupaia_chinensis.KB338335.1                                  142 33 -       332 tccatctct----c-----t----c--accaT-TGTAATTTAG---TCAACA
i Tupaia_chinensis.KB338335.1                            I 3 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3299 33 -     70247 TCCATCCCT----C-----T----C--ACCAC-TGTAATTTAG---TCAACA
i Tupaia_tana.TupTan_flattened_line_394                  I 3 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359744 25 -  33153633 t------------c-----t----t--accac-tggaatttaa---tCAATA
i Tursiops_truncatus.MRVK01000835.1                      I 3 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103546 25 -    105689 T------------C-----T----C--ACCAT-TGGAATTTAA---TCAATA
i Uropsilus_gracilis.UroGra_scaffold_7153                I 3 C 0
s Ursus_maritimus.KK499267.1                                177404 25 +   5085361 t------------t-----t----c--aCTTC-TGGAATTTAA---TCAATG
i Ursus_maritimus.KK499267.1                             I 12 C 0
s Varecia_rubra.k141_787544                                  21265 30 -     30710 ttcaactct----c-----t----c--ACCAC-TGAAATCT------CAACA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20173 30 -    147434 TTCAACTGT----C-----T----C--ACCAC-TGAAATCT------CAACA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74830 25 +   5488506 t------------c-----t----c--accAC-TGGAACTTAG---TCAATA
i Vicugna_pacos.KN270157.1                               I 8 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100803 25 -    112863 T------------T-----T----C--ACTTC-TGGAATTTAA---TCAATA
i Vulpes_lagopus.VulLag_flattened_line_12041             I 12 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162398  5 -    224448 -----------------------------------------------CAATA
i Xerus_inauris.XerIna_scaffold_2302                     I 9 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24672 25 -     86975 T------------T-----T----C--CCTTC-TGGAATTTAA---TCAATG
i Zalophus_californianus.ZalCal_flattened_line_17732     I 12 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2431392            240 25 +       382 t------------c-----t----t--accac-tggaatttaa---tCAATA
i Ziphius_cavirostris.ZipCav_flattened_line_2431392      I 3 C 0
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        432 1 +     36723 A
s Acinonyx_jubatus.LLWD01001279.1                           808984 1 +   1699592 A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410746 1 +  29979442 A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 3
s Ailurus_fulgens.LNAC01001112.1                            211665 1 +    347723 A
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 3
s Allenopithecus_nigroviridis.k141_3755588                   43743 1 +     53615 A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39558 1 +     44087 A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68477 1 -     84148 C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40700 1 -     78289 C
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40148 1 +     55831 C
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38589 1 -     64179 C
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20232 1 -     24835 C
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37215 1 +     45454 C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42914 1 +     70886 C
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5041 1 +     30854 C
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29180 1 +     42133 C
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583691 1 +   2318259 G
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172459 1 -    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48790 1 -     68529 G
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46989 1 -     65372 G
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40737 1 +     43593 G
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668747 1 +   5030052 G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20389 1 -     23494 G
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5525 1 +      8415 G
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11725 1 -     32367 T
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 5 I 1
s Arctocebus_calabarensis.k141_1364444                       15627 1 -     45910 A
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   299 1 -     15198 A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               270975 1 +  21539123 C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7146 1 +     48076 C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2280 1 -     28759 C
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29832 1 +     44353 C
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45207 1 -     71267 C
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19263 1 -     33135 C
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2377 1 +     11645 A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2379 1 -     19611 A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955520 1 -  23207421 A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2728 1 -      4711 A
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84688 1 +    124022 G
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20219 1 +    288883 G
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354606 1 +  48749331 G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753174 1 +   1948126 G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543313 1 -  45695690 G
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528335 1 -   4408762 G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   4169 1 +     28062 G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39464 1 -     91139 G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16989 1 +     95584 G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16902 1 +    119600 G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              6082 1 -     13885 A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14768 1 +     17162 A
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449724 1 + 189096842 A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16017 1 -     18408 A
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629517 1 +  17673402 A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663803 1 +   7040546 A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207463 1 +   1652518 A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501195 1 +  60362399 A
i CanFam4.chr16                                          C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4825 1 -     23171 A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 3
s Canis_lupus_dingo.QKWQ01000480.1                          218186 1 +   9314153 A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 3
s Canis_lupus_familiaris.chr16                            41611311 1 +  59632846 A
i Canis_lupus_familiaris.chr16                           C 0 I 3
s Canis_lupus_orion.HG994398.1                            45102881 1 -  63665305 A
i Canis_lupus_orion.HG994398.1                           C 0 I 3
s Capra_aegagrus.CM003241.1                               27407402 1 -  46296322 G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589675 1 +  44709034 G
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265515 1 +    496798 G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                345 1 +      5315 A
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75166 1 -    217609 G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1302 1 -     12580 A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39188 1 +     53515 A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367420 1 -  26074798 A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4309 1 -     34880 A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63404 1 -     89041 A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13795 1 -     50533 G
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488396 1 -  27778364 A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15229 1 +     27315 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136903 1 -   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40644 1 +     47900 A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40476 1 -     44860 A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40458 1 -    148725 A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23444 1 -     40656 A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3452 1 +     20796 A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7707 1 -     17524 A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23399 1 -     34525 A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8119 1 -     25376 A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360596 1 -  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266424 1 +  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27870 1 -     45857 A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23661 1 -     32606 A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27310 1 +     27662 A
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21360 1 +     70610 A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18225 1 +     36323 A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             2829 1 -     19938 A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5267 1 -     32913 A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15680 1 -     40346 A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15944 1 +    216457 A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15723 1 +     39636 A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_2737257                          16762 1 -     17061 A
i Chiropotes_albinasus.k141_2737257                      C 0 N 0
s Chiropotes_israelita.k141_313004                           38808 1 -    112038 A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4380 1 +     34062 A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339123 1 +  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5727 1 -     44032 A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300449 1 - 135778131 A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                  9643 1 +     15858 A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601219 1 -    839153 A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             404980 1 -   2368649 A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374170 1 - 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4864 1 -      6605 A
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803291 1 +  53390261 A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8707 1 +     10921 A
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               222 1 +     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 3
s Dasypus_novemcinctus.JH564415.1                          2087894 1 -   2246927 G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288822 1 +  12879189 A
i Daubentonia_madagascariensis.ctg71                     I 2 C 0
s Delphinapterus_leucas.KZ290073.1                        18623848 1 -  35494412 G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660683 1 -   1390856 A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135475 1 -    198055 A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2048 1 +     19438 A
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238078 1 -    607251 G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906204 1 +  41312741 A
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Eptesicus_fuscus.JH977646.1                             12573612 1 +  14770903 A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037640 1 -   4378816 A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371574 1 +  39960074 A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408360 1 -    498745 A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258679 1 +  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63399 1 -    133382 G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3615 1 +      7672 G
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11782 1 -     24895 A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39494 1 -     70999 A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83454 1 +    112731 A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40026 1 +     68309 A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50351 1 -     65740 A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20981 1 -     75513 A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45174 1 -     97555 A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1899 1 +     30972 A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39624 1 -     52037 A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56025 1 -    111500 A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242643 1 - 206538554 A
i Felis_catus.CM001381.2                                 C 0 I 3
s Felis_catus_fca126.CM031415.1                          185112425 1 - 205367284 A
i Felis_catus_fca126.CM031415.1                          C 0 I 3
s Felis_nigripes.FelNig_flattened_line_31944                 23773 1 -     30238 A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 3
s Galago_moholi.ctg3793                                     119208 1 -    137831 A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             2748 1 +     22493 A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            14941 1 -     32986 A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               3089 1 +      5976 A
i Galeopterus_variegatus.GalVar_scaffold_132127          I 60 I 174
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89756 1 -     95226 G
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Gorilla_beringei.k141_3358147                                789 1 -      8343 A
i Gorilla_beringei.k141_3358147                          I 33 I 72
s Gorilla_gorilla.LT578341.1                                250284 1 - 186649187 A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11715 1 -     40692 A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33117 1 +     49394 A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57985 1 -     66874 A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6862 1 -     42923 A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13858 1 -     53142 A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26537 1 -    327341 G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 3
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7506 1 +     48891 G
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11000 1 +     12639 C
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6099 1 -     36432 G
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545947 1 -   1711038 A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45255 1 +     49977 A
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138184 1 -    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  64702 1 +     83186 A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 287
s Hylobates_agilis.k141_1155965                               1212 1 +     12352 A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8395 1 +     55766 A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047739 1 + 191637585 A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797071 1 +  11177569 A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375112 1 +   7955117 T
i Ictidomys_tridecemlineatus.JH393364.1                  I 5 C 0
s Indri_indri.k141_2435083                                    1062 1 +      1070 A
i Indri_indri.k141_2435083                               C 0 N 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1635 1 -     16823 G
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64124 1 -     97402 G
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39522 1 +    110728 C
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59121 1 -     65777 A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756507 1 +  30322482 A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         228 1 -     13097 G
i Leontocebus_fuscicollis.k141_2994775                   N 0 C 0
s Leontocebus_illigeri.k141_2951200                            179 1 +      5940 G
i Leontocebus_illigeri.k141_2951200                      N 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6431 1 -     11567 A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7812 1 -     12945 A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809296 1 -   3914936 A
i Leptonychotes_weddellii.KB714746.1                     C 0 I 3
s Lipotes_vexillifer.KE559953.1                             333158 1 +    662738 G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328859 1 -   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2186 1 +     19643 A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5035844 1 -   6120653 A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39076166 1 +  43346337 A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41610466 1 +  59628241 A
i Lycaon_pictus.CM007581.1                               C 0 I 3
s Macaca_arctoides.k141_1757516                              41140 1 -     61512 A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368768 1 -  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21087 1 +     30207 A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18190 1 -     24934 A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20974 1 +     30527 A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32163 1 -     50087 A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41901 1 +     51645 A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410475 1 - 187317192 A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395358 1 +  25927173 A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44490 1 -     62418 A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21177 1 +     24253 A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40934 1 +     59329 A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266766 1 +    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18112 1 +     21031 A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31844 1 +     33478 A
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219120 1 -    270270 A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318242 1 +  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353074 1 -    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669855 1 -    737560 T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217149 1 +    317179 T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7489205 1 +  40650429 T
i Marmota_marmota.CZRN01000018.1                         I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146197 1 +    207569 A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14216 1 -     74585 A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 3
s Mesoplodon_bidens.MesBid_scaffold_6114                     79702 1 +     93471 G
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 6190 1 +     17804 A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6963 1 -     12984 A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14925 1 -     26561 A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180434 1 +    200668 A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         18153 1 -     27822 A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4312 1 +     27589 A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 3
s Monodon_monoceros.MonMon_M_scaffold_103                   351591 1 +    437263 G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174604 1 +    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22661 1 -     82753 G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14306 1 -     63510 G
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 3
s Murina_feae.MurFea_scaffold_17764                          33535 1 +     47283 A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343260 1 +  14710649 A
i Mustela_putorius.JH418006.1                            C 0 I 3
s Myotis_brandtii.KE162005.1                               9787968 1 +  10118263 A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378379 1 +   6019432 A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL432175.1                                18592 1 -     39439 A
i Myotis_lucifugus.GL432175.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1918 1 +      3929 A
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              109799 1 +    130748 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              24518 1 +     34575 A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464708 1 -  31847680 A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 3
s Neophocaena_asiaeorientalis.KZ687982.1                   1225760 1 -   7148211 G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122811 1 -    149072 A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49469 1 -    132029 A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5565 1 -     16345 A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11448 1 +     22201 A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409785 1 -  22158432 A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21848 1 -     54323 A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194082 1 +   9404916 A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 3
s Nycticebus_bengalensis.LG01                             93630959 1 + 196305487 A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              348 1 +      2758 A
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559239 1 - 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447478 1 +   2017862 A
i Odobenus_rosmarus.KB229312.1                           C 0 I 3
s Odocoileus_virginianus.KZ100018.1                         434649 1 -    630418 G
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12640 1 +    150152 g
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8095030 1 +  10937097 G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35147 1 +    559221 A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 3
s Otolemur_crassicaudatus.k141_85057                         22484 1 -     23432 A
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347049 1 +   1103335 a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402626 1 -  44047080 G
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3145 1 +     17875 G
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467672 1 - 189151597 A
i Pan_troglodytes.CM009242.2                             C 0 I 78
s Panthera_onca.PanOnc_flattened_line_3271                   20361 1 -    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 3
s Panthera_pardus.KV860321.1                              18457687 1 -  18783137 A
i Panthera_pardus.KV860321.1                             C 0 I 3
s Panthera_tigris.KE722367.1                               3968416 1 +   8748460 A
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1614072 1 +   2937107 G
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   239086 1 - 183742232 A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5553 1 +     21308 A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286590 1 -  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18206 1 -     27687 A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11342 1 +     16796 A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18152 1 -     23640 A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11278 1 +     78924 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 3
s Perodicticus_ibeanus.k141_1921260                          21048 1 +     31479 A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13419 1 -     24908 A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10888 1 -     15039 G
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4972 1 +      7560 A
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60679 1 -     63152 A
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43278 1 +     45295 A
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     957 1 +      5735 A
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45806 1 +     46691 A
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61158 1 +    207309 A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2278 1 -     25401 A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27993 1 +     58159 A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28269 1 +     63561 A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28032 1 +     51148 A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553025 1 -   4542175 A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28016 1 +     51125 A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2972 1 -      8168 A
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4449 1 +     39866 A
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 1
s Plecturocebus_caligatus.k141_1382851                       38937 1 -     87950 A
i Plecturocebus_caligatus.k141_1382851                   C 0 I 1
s Plecturocebus_cinerascens.k141_1164729                     39330 1 -     88961 A
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 1
s Plecturocebus_cupreus.k141_2351393                          4030 1 -     39403 A
i Plecturocebus_cupreus.k141_2351393                     C 0 I 1
s Plecturocebus_dubius.k141_1058799                          38983 1 +     87928 A
i Plecturocebus_dubius.k141_1058799                      C 0 I 1
s Plecturocebus_grovesi.k141_2013005                          4027 1 -     60166 A
i Plecturocebus_grovesi.k141_2013005                     C 0 I 1
s Plecturocebus_hoffmannsi.k141_3303950                      10963 1 -     67232 A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 1
s Plecturocebus_miltoni.k141_349282                          38879 1 -     90634 A
i Plecturocebus_miltoni.k141_349282                      C 0 I 1
s Plecturocebus_moloch.k141_1031110                          40347 1 +     89403 A
i Plecturocebus_moloch.k141_1031110                      C 0 I 1
s Pongo_abelii.CM009266.2                                   173289 1 - 189387572 A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188287 1 -   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23458 1 +     69807 A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40653 1 -     80239 A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8157 1 +     14086 C
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979665 1 +   4620579 A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562242 1 -   2598838 G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79329 1 -     79582 A
i Propithecus_coronatus.k141_149744                      C 0 I 71
s Propithecus_diadema.k141_153680                              484 1 -     11706 A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4219 1 -     30655 A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30544 1 +     46564 A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90835 1 -     98465 A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4457 1 +     35169 G
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47681 1 -     66298 A
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4355 1 -     10349 A
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 I 3
s Pteropus_alecto.KB030862.1                               5836593 1 -  28871421 a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533168 1 -   4952924 A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095239 1 +  38429054 A
i Puma_concolor.QAVW01001104.1                           C 0 I 3
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51606 1 +     55069 G
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909242 1 +   3329780 A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24676 1 +     27361 A
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118035 1 + 195417433 A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232284 1 -   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70638 1 -    116970 A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                155 1 +     27962 G
i Saguinus_bicolor.k141_1429097                          N 0 C 0
s Saguinus_geoffroyi.k141_3779887                              155 1 +      6077 G
i Saguinus_geoffroyi.k141_3779887                        N 0 C 0
s Saguinus_imperator.k141_1898058                              176 1 +      5971 G
i Saguinus_imperator.k141_1898058                        N 0 C 0
s Saguinus_inustus.k141_2469308                                228 1 +      5932 G
i Saguinus_inustus.k141_2469308                          N 0 C 0
s Saguinus_labiatus.k141_745510                                292 1 -     11898 C
i Saguinus_labiatus.k141_745510                          N 0 N 0
s Saguinus_midas.LG03                                       387414 1 - 209938924 G
i Saguinus_midas.LG03                                    I 317 C 0
s Saguinus_mystax.k141_2237965                                8277 1 +     22212 C
i Saguinus_mystax.k141_2237965                           I 316 N 0
s Saguinus_oedipus.k141_1466288                                554 1 -      4301 G
i Saguinus_oedipus.k141_1466288                          N 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6215 1 +     16473 G
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234644 1 +   5703754 A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4234 1 +     21866 A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112346 1 +    313613 A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21166 1 +     27374 A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24681 1 +     58920 A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11178 1 -     45317 A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18835 1 -     42441 A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21517 1 -     29113 A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24589 1 -     48123 A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854340 1 -   1910179 A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855489 1 +   3870691 T
i Spermophilus_dauricus.KZ294078.1                       I 5 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              2209 1 -     97271 G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_6629             120905 1 +    196729 G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 3
s Sus_scrofa.CM000828.4                                    6639631 1 +  69701581 G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386761 1 +   1523678 A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                24751 1 -     25844 G
i Tamandua_tetradactyla.TamTet_scaffold_67439            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187418 1 +    199430 a
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101373 1 -    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                3128 1 +      6850 G
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3212 1 +     20590 G
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349071 1 - 186847797 A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                    9825 1 -     31044 A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475483 1 -    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 6
s Trachypithecus_auratus.k141_1189070                        16730 1 +     26378 C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29411 1 -     78344 A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16051 1 +     25722 C
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24274 1 -     62838 A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24393 1 +     46913 A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5201 1 -     28527 C
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26213 1 -     64340 A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24250 1 -     63452 A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5692 1 +     22490 A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3312 1 +      4141 A
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6118 1 -     13050 C
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251354 1 -   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57087 1 +     59866 A
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478823 1 -  10818551 A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB338335.1                                  175 1 -       332 G
i Tupaia_chinensis.KB338335.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3332 1 -     70247 G
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359769 1 -  33153633 G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103571 1 -    105689 A
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177429 1 +   5085361 A
i Ursus_maritimus.KK499267.1                             C 0 I 3
s Varecia_rubra.k141_787544                                  21295 1 -     30710 A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20203 1 -    147434 A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74855 1 +   5488506 A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100828 1 -    112863 A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 3
s Xerus_inauris.XerIna_scaffold_2302                        162403 1 -    224448 C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24697 1 -     86975 A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_2431392            265 1 +       382 G
i Ziphius_cavirostris.ZipCav_flattened_line_2431392      C 0 C 0
e Allochrocebus_solatus.k141_3554717                         14582 0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904 0 -     21945 C
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Mirza_zaza.k141_766280                                     48627 0 -     62432 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Microcebus_murinus.CM007674.1                           74980766 0 +  93316391 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Lepilemur_septentrionalis.k141_360456                       5168 0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          5169 0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              5163 0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          5164 0 +     29618 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Cheirogaleus_medius.k141_759766                              998 0 -     15404 C
e Cheirogaleus_major.k141_666340                             26803 0 -     33796 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        433 78 +     36723 G----A---GTATCCG-TGGCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATA---CGCTTC-TATTTCTAACAT------T--------T-----GATTTA---C-T------GC
s Acinonyx_jubatus.LLWD01001279.1                           808988 74 +   1699592 T----C---T---CAG-TGT--------T-------------CTA------ATATTTAGTA-TCT--GCCGTTTTG-T-C--TTAA-----TT---GTGCTag-aatttctaaaatttg-att--------t-----a--------a-t------ac
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410750 75 +  29979442 T----C---T---Cag-tgt--------t-------------tta---------atatttagtatttaccATTTTG-C-T-GTTAA-----AT---GTgctta-catttctaaaatttg-att--------t-----a--------t-c------ac
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Ailurus_fulgens.LNAC01001112.1                            211669 75 +    347723 T----C---A---CGG-Tgt--------t-------------tta---------atatttagtatttaccatttta-c-t-gttaa-----at---gtgctta-catttctaaaatttg-att--------t-----a--------t-c------ac
i Ailurus_fulgens.LNAC01001112.1                         I 3 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43744 78 +     53615 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTACTT----------------GTCATTTCG-C-T-GTTAC-----ATA---CGCTTC-TCTTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39559 78 +     44087 C----A---GTATCCC-TGGCATGCTG-T-------------TTAGTATTT----------------GTCATTTCG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68478 78 -     84148 C----A---ATATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCTAG-C-T-GTTAC-----ATA---CACCTC-TGTTTCTAACAT------T--------T-----GATTTA---C-T------CC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40701 78 -     78289 C----A---ATATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCTAG-C-T-GTTAC-----ATA---CACCTC-AGTTTCTAACAT------T--------T-----GATTTA---C-T------CC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40149 78 +     55831 C----A---ATATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCTAG-C-T-GTTAC-----ATA---CACCTC-TATTTCTAACAT------T--------T-----GATTTA---C-T------CC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38590 78 -     64179 C----A---ATATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCTAG-C-T-GTTAC-----ATA---CACCTC-TATTTCTAACAT------T--------T-----TATTTA---C-C------CC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20233 78 -     24835 C----A---ATATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCTAG-C-T-GTTAC-----ATA---CACCTC-TATTTCTAACAT------T--------T-----GATTTA---C-T------CC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37216 78 +     45454 C----A---ATATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCTAG-C-T-GTTAC-----ATA---CACCTC-TATTTCTAACAT------T--------T-----GATTTA---C-T------CC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42915 78 +     70886 C----A---ATATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCCAG-C-T-GTTAC-----ATA---CACCTC-TATTTCTAACAT------T--------T-----GATTTA---C-T------CC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5042 78 +     30854 C----A---ATATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCTAG-C-T-GTTAC-----ATA---CACCTC-TATTTCTAACAT------T--------T-----GATTTA---C-C------CC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29181 78 +     42133 C----A---ATATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCTAG-C-T-GTTAC-----ATA---CACCTC-TATTTCTAACAT------T--------T-----GATTTA---C-T------CC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583692 73 +   2318259 C----ATTAT---CAA-TGT--------T-------------TCA------GTATTT----------GCTATTTGACT-C-TT--A-----A--ATTTgctta-tatttctaaaat------tttatttt-t-----g--------t-t------gc
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172460 41 -    412891 C----A---T---CAA-TGT--------T-------------TTA------GTACTTAGT-GT-TT-GCCATTTT--A-TTGTGA------------------------------------------------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 31
s Antilocapra_americana.AntAmePen_scaffold_21030             48791 73 -     68529 C----ATTAT---CAA-TGT--------T-------------TCA------GTATTT----------GCTATCTTATT-C-TT--A-----A--ATTTGCTTA-TATTTCTAAAAT------T-TTATTTTT-----A--------T-T------GC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   46990 78 -     65372 C----A---GTATCCC-TGTCATGTTA-C-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTCTAACGT------T--------T-----GATTTA---C-T------CC
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40738 78 +     43593 C----A---GTATCCC-TGTCATGTTA-C-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTCTAACGT------T--------T-----GATTTA---C-T------CC
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668748 78 +   5030052 C----A---GTATCCC-TGTCATGTTA-C-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTCTAACGT------T--------T-----GATTTA---C-T------CC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20390 78 -     23494 C----A---GTATCCC-TGTCATGTTA-C-------------CTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTCTAACGT------T--------T-----GATTTA---C-T------CC
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5526 78 +      8415 C----A---GTATCCC-TGTCATGTTA-C-------------CTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTCTAACGT------T--------T-----GATTTA---C-T------CC
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11727 29 -     32367 ------------------GT--------T-------------TTG------GTATTT----------GCAATTTTA-C-T-GTTAC-----G-----------------------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 1 I 22
s Arctocebus_calabarensis.k141_1364444                       15628 71 -     45910 C----A---TTATTCA-TGT--------T-------------TTAGGATTG----------------GCTATTTTA-T-T-ATTAC-----ATA---TGCATA-TATTTGTAAAAT------T--------T-----GATCTA---T-T------GC
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   300 41 -     15198 G----A---T---CAA-TGT--------T-------------TTA------GTGCTTAGT-GT-TT-GCCATTTT--A-TTGTGA------------------------------------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 31
s Ateles_geoffroyi_b.tarseq_1536                               270976 78 +  21539123 C----A---GTATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCTAG-C-T-GTTAC-----ATA---CACCTC-TATTTGTAACAT------T--------T-----GATTTA---C-T------CC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7147 78 +     48076 T----A---GTATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCTAG-C-T-GTTAC-----ATA---CACCTC-TATTTGTAACAT------T--------T-----GATTTA---C-T------CC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2281 78 -     28759 C----A---GTATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCTAG-C-T-GTTAC-----ATA---CACCTC-TATTTGTAACAT------T--------T-----GATTTA---C-T------CC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29833 78 +     44353 C----A---GTATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCTAG-C-T-GTTAC-----ATA---CACCTC-TATTTGTAACAT------T--------T-----GATTTA---C-T------CC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45208 78 -     71267 T----A---GTATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCTAG-C-T-GTTAC-----ATA---CACCTC-TATTTGTAACAT------T--------T-----GATTTA---C-T------CC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19264 78 -     33135 C----A---GTATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCTAG-C-T-GTTAC-----ATA---CACCTC-TATTTGTAACAT------T--------T-----GATTTA---C-T------CC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2378 71 +     11645 C----A---TTAGTAA-TAC--------T-------------TTAGTATTA----------------GCTATttta-t-t-gttat-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------ac
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2380 71 -     19611 C----A---TTAGTAA-TAC--------T-------------TTAGTATTA----------------GCTATttta-t-t-gttat-----ata---tgctta-tatttctaaagt------t--------t-----gattta---t-t------ac
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955521 76 -  23207421 C----ATTAT---CAA-Cgt--------t--------------ta------------tttagtattttctattttact-g-tt--a--aata-----tgctta-tatttctaaaat------ttgatttt-t-----a--------t-c------gc
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2729 76 -      4711 C----ATTAT---CAA-Cgt--------t--------------ta------------tttagtattttctattttact-g-tt--a--aata-----tgctta-tatttctaaaat------ttgatttt-t-----a--------t-c------gc
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84689 73 +    124022 C----ATTAT---CAA-TGT--------T-------------TCA------GTATTT----------GCTATTTGACT-C-TT--A-----A--ATTTGCTTA-TATTTCTAAAAT------T-TTATTTTT-----G--------T-T------GC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20220 73 +    288883 C----ATTAT---CAA-TGT--------T-------------TCA------GTATTT----------GCTATTCTACT-C-TT--A-----A--ATTTGCTTA-TAtttctacaat------tttatttt-t-----a--------t-t------gc
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354607 73 +  48749331 C----ATTAT---CAA-TGT--------T-------------TCA------GTATTT----------GCTATTCTACT-C-TT--A-----A--ATTTGCTTA-Tatttctacaat------tttatttt-t-----a--------t-t------gc
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753175 73 +   1948126 C----ATTAT---CAA-TGT--------T-------------TCA------GTATTT----------GCTATTCTACT-C-TT--A-----A--ATTTGCTTA-TAtttctacaat------tttatttt-t-----a--------t-t------gc
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543314 73 -  45695690 C----ATTAT---CAA-TGT--------T-------------TCA------GTATTT----------GCTATTCTACT-C-TT--A-----A--ATTTGCTTA-TAtttctacaat------tttatttt-t-----a--------t-t------gc
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528336 73 -   4408762 C----ATTAT---CAA-TGT--------T-------------TCA------GTATTT----------GCTATTCTACT-C-TT--A-----A--ATTTgctta-tatttctaaaat------tttacttt-t-----a--------t-t------gc
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   4170 75 +     28062 C----A---GTGTCCC-CGTCATGTCA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATG---CACTT----TTTCTAACAT------C--------T-----GATTTA---C-T------CC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39465 75 -     91139 C----A---GTGTCCC-CGTCATGTCA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATG---CACTT----TTTCTAACAT------C--------T-----GATTTA---C-T------CC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  16990 75 +     95584 C----A---GTGTCCC-CGTCATGTCA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATG---CACTT----TTTCTAACAT------C--------T-----GATTTA---C-T------CC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16903 75 +    119600 C----A---GTGTCCC-CGTCATGTCA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATG---CACTT----TTTCTAACAT------C--------T-----GATTTA---C-T------CC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              6083 78 -     13885 C----A---GTATCCC-TGTCATGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTCTAAGAT------G--------T-----GATTTA---C-T------CC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14769 78 +     17162 C----A---GTATCCC-TGTCATGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTGTAACAT------G--------T-----GATTTA---C-T------CC
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449725 78 + 189096842 C----A---GTATCCC-TGTCATGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTGTAACAT------G--------T-----GATTTA---C-T------CC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16018 78 -     18408 C----A---GTATCCC-TGTCATGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTGTAACAT------G--------T-----GATTTA---C-T------CC
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629518 80 +  17673402 C----ATGAT---CAG-Tgt--------t-------------tta---------gtatttagtatttgccatttta-c-t-tttca-----at---gtgctta-tatttctaaaat------tttatttt-t-----a--------t-c------ac
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663804 80 +   7040546 C----ATGAT---CAG-Tgt--------t-------------tta---------gtatttagtatttgccatttta-c-t-tttca-----at---gtgctta-tatttctaaaat------tttatttt-t-----a--------t-c------ac
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207464 80 +   1652518 C----ATGAT---CAG-Tgt--------t-------------tta---------gtatttagtatttgccatttta-c-t-tttca-----at---gtgctta-tatttctaaaat------tttatttt-t-----a--------t-c------ac
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501199 75 +  60362399 T----C---T---CAG-TGT--------T-------------TTC------CTATTTAGTA-T-TT-GCCATTTTA-C-T-Gttaa-----at---atgattt-aatttctaaaatttg-att--------t-----a--------t-c------ac
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4829 75 -     23171 T----C---T---CAG-TGT--------T-------------TTC------CTATTTAGTA-T-TT-GCCATTTTA-C-T-GTTAA-----AT-A--TGATTT-AATTTCTAAAAT-TTGATT--------T-----A--------T-C------AC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218190 75 +   9314153 T----C---T---CAG-TGT--------T-------------TTC------CTATTTAGTA-T-TT-GCCATTTTA-C-T-gttaa-----at---atgattt-aatttctaaaatttg-att--------t-----a--------t-c------ac
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            41611315 75 +  59632846 T----C---T---CAG-TGT--------T-------------TTC------CTATTTAGTA-T-TT-GCCATTTTA-C-T-gttaa-----at---atgattt-aatttctaaaatttg-att--------t-----a--------t-c------ac
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            45102885 75 -  63665305 T----C---T---CAG-TGT--------T-------------TTC------CTATTTAGTA-T-TT-GCCATTTTA-C-T-gttaa-----at---atgattt-aatttctaaaatttg-att--------t-----a--------t-c------ac
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Capra_aegagrus.CM003241.1                               27407403 60 -  46296322 C----ATTAT---CAA-TGT--------T-------------TCA------GTATTT----------GCTATTTGACT-C-TT--A-----A--ATTTgctta-tatttctaaaat------t----------------------------------
i Capra_aegagrus.CM003241.1                              C 0 I 13
s Capra_hircus.CM004588.1                                 26589676 60 +  44709034 C----ATTAT---CAA-TGT--------T-------------TCA------GTATTT----------GCTATTTGACT-C-TT--A-----A--ATTTGctta-tatttctaaaat------t----------------------------------
i Capra_hircus.CM004588.1                                C 0 I 13
s Carlito_syrichta.NW_007259797.1                           265516 57 +    496798 C----A---TTATCAA-TAT--------T-------------TTAGTATTA----------------GCTATCTTT-C-T-GTTAC-----ATA---AACTTA-TGTTTctaaa-------------------------------------------
i Carlito_syrichta.NW_007259797.1                        C 0 I 10
s Carollia_perspicillata.CarPer_scaffold_170178                346 41 +      5315 C----A---T---CAG-TGC--------T-------------TTA------GTACTTAGT-GT-TT-GCCATTTT--A-TTGTGA------------------------------------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 31
s Catagonus_wagneri.CatWag_scaffold_2839                     75167 85 -    217609 C----ATGAT---CAA-TGT--------T-------------TTA------GTATTTAGTA-T-TT-GCCATTTTACT-G-TT--A--AATA-----TGCTTG-TATTTATAAAAT------T---TGATTT-----T--------TTTtttaccac
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1303 78 -     12580 C----A---GTATCCC-TGTCACGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTCTAACAT------G--------T-----GATTTA---C-T------CC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39189 78 +     53515 C----A---GTATCCC-TGTCACGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTCTAACAT------G--------T-----GATTTA---C-T------CC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367421 78 -  26074798 C----A---GTATCCC-TGTCATGTTG-T-------------TTAGTAGCT----------------GTTATCTTG-C-T-GTTAC-----ATA---GAGTTC-TATTTCTAACAT------T--------T-----GATTTT---C-T------CC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4310 78 -     34880 C----A---GTATCCC-TGTCATGTTG-T-------------TTAGTAGCT----------------GTTATCTTG-C-T-GTTAC-----ATA---CAGTTC-TATTTCTAACAT------T--------T-----GATTTT---C-T------CC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63405 78 -     89041 C----A---GTATCCC-TGTCATGTTG-T-------------TTAGTAGCT----------------GTTATCTTG-C-T-GTTAC-----ATA---CAGTTC-TATTTCTAACAT------T--------T-----GATTTT---C-T------CC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13796 57 -     50533 C----A---TTATCAA-TGT--------T-------------TTAGTATTA----------------GCTATCTTT-C-T-GTTAC-----ATA---AACTTA-TATTTCTAAA-------------------------------------------
i Cephalopachus_bancanus.k141_1275952                    C 0 I 10
s Ceratotherium_simum.JH767749.1                          15488397 66 -  27778364 C----ATTTT---CAA-TGT--------T-------------TTA------GTATTT----------GCCATTTTA-C-T-GTTAA-----At---atgctta-tatttctaaaat------t--------t-----a--------t-c------ac
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15230 66 +     27315 C----ATTTT---CAA-TGT--------T-------------TTA------GTATTT----------GCCATTTTA-C-T-GTTAA-----At---atgctta-tatttctaaaat------t--------t-----a--------t-c------ac
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136904 78 -   4669795 c----a---gtatCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40645 78 +     47900 C----A---GTATCCC-TGGCATACTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40477 78 -     44860 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40459 78 -    148725 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23445 78 -     40656 C----A---GTATCCC-TGGCGTGCTA-T-------------TTAGTATTT----------------GTCATTTCG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3453 78 +     20796 C----A---GTATCCC-TGGCGTGCTA-T-------------TTAGTATTT----------------GTCATTTCG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7708 78 -     17524 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTCG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23400 78 -     34525 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTACTT----------------GTCATTTCG-C-T-GTTAC-----ATA---CACTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8120 78 -     25376 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTACTT----------------GGCATTTCG-C-T-GTTAC-----ATA---CGCTTC-TATTGCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360597 78 -  39242232 C----A---ATATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GGCATTTCG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266425 78 +  21565898 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTCG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27871 78 -     45857 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTACTT----------------GGCATTTCG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23662 78 -     32606 C----A---ATATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GGCATTTCG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27311 78 +     27662 C----A---GTATCCC-TGGCGTGCTA-T-------------TTAGTATTT----------------GTCATTTCG-C-T-GTTAA-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21361 78 +     70610 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTACTT----------------GGCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18226 78 +     36323 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTCG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             2830 70 -     19938 T----G---T---TATCAAT--------G-------------CTA------GTATTT----------TCAATTTTA-C-T-GTTAA-----AT-A--TGCTTA-TGTTTCTAAAGC------T--------T-TATTTG-------T-T-----AGC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 6382
s Cheirogaleus_major.k141_666340                             26803 64 -     33796 ---------TTAGTAA-TGT--------T-------------TTAGAATTA----------------GC-----TA-T-T-Gttat-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                              998 64 -     15404 ---------TTAGTAA-TGT--------T-------------TTAGAATTA----------------GC-----TA-T-T-GTTAC-----ATA---TGCtta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5268 78 -     32913 C----A---GTACCCC-TGTCGTGTGA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTCAC-----ATA---CGCTTC-TATTTCTAACAT------T--------T-----GACTTA---C-T------TG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15681 78 -     40346 C----A---GTACCCC-TGTCGTGTGA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTCAC-----ATA---CGCTTC-TATTTCTAACAT------T--------T-----GACTTA---C-T------TG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             15945 78 +    216457 C----A---GTACCCC-TGTCGTGTGA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTCAC-----ATA---CGCTTC-TATTTCTAACAT------T--------T-----GACTTA---C-T------TG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15724 78 +     39636 C----A---GTACCCC-TGTCGTGTGA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTCAC-----ATA---CGCTTC-TATTTCTAACAT------T--------T-----GACTTA---C-T------TG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            158 77 +      5346 T----G---GTATCCC-TGTCATGTTG-T-------------TTAGTATTT----------------GCTATCTTG-C-T-GTTAC-----ATA---CACTTC-TGTTTCT-ACAT------T--------T-----GATTTA---C-T------CC
i Chiropotes_albinasus.k141_1946120                      N 0 C 0
s Chiropotes_israelita.k141_313004                           38809 78 -    112038 C----A---GTGTCCC-CGTCATGTCA-T-------------TTCGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATG---CACTTC-TATTTCTAACAC------C--------T-----GATTTA---C-T------CC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4381 78 +     34062 C----A---GTGTCCC-CGTCATGTCA-T-------------TTCGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATG---CACTTC-TATTTCTAACAC------C--------T-----GATTTA---C-T------CC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339124 78 +  18827391 C----A---GTATCCC-TGGCATGCTG-T-------------TTAGTACGT----------------GTCATTTCG-C-T-GTTAC-----ATA---CGCTTC-TCTTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5728 83 -     44032 C----A---GTATCCC-TGGCATGCTG-T-------------TTAGTACGT----------------GTCATTTCG-C-T-GTTACTTAACATA---CGCTTC-TCTTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300450 78 - 135778131 C----A---GTATCCC-TGGCATGCTG-T-------------TTAGTACGT----------------GTCATTTCG-C-T-GTTAC-----ATA---CGCTTC-TCTTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                  9644 70 +     15858 C----A---A---TATTAAT--------C-------------TTA------GTATTT----------GCAATTTTA-T-T-GTTAA-----AT-A--TGTTTG-TATTTCCAAAAC------T----TGATT-----TG-------T-T-----AGC
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 487
s Choloepus_hoffmanni.KN194906.1                            601220 70 -    839153 C----A---A---TATTAAT--------C-------------TTA------GTATTT----------gcaatttta-t-t-gttaa-----at---atgtTTG-TATTTCCAAAAC------T----TGATT-----TG-------T-T-----AGC
i Choloepus_hoffmanni.KN194906.1                         C 0 I 487
s Colobus_angolensis.KN981557.1                             404981 78 -   2368649 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-ATTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374171 78 - 200372422 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-ATTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4865 78 -      6605 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-ATTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803292 53 +  53390261 CAG-TA---T---CAA-TTT--------T-------------TTA------GTACT-----------GCCATTCTC-C-C-ATTAA-----ac--------ca-aaattcagaaat-----------------------------------------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8708 78 +     10921 CAT-TA---T---CAA-TAT--------T-------------TTA------GTATTT-G--GTATTTGCCATTTTA-C-T-ATTAA-----AT-A--TGCTTA-TATTTCTAAAAT-TTTATT--------C-----A--------T-T------GC
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               226 74 +     87169 T----C---T---CAG-TGT--------T-------------TTA------ATATTTAGTA-CCT--GCCGTTTTG-T-T-GTTAA-----TT---GTGCTGG-AATTTCTAAAAC-tg-att--------t-----a--------t-t------ac
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 C 0
s Dasypus_novemcinctus.JH564415.1                          2087895 68 -   2246927 T----A---T---TATCAAT--------c-------------cta----------------gtatttttaatttta-c-t-attaa---aaat---atacttt-tgtttCTAAAAC------T--------T-----TG-------T-T-----AGC
i Dasypus_novemcinctus.JH564415.1                        C 0 I 17525
s Daubentonia_madagascariensis.ctg71                        288823 71 +  12879189 C----A---TTATTAA-TGT--------T-------------TCAGTATTA----------------GCTATTTTA-T-T-GTTAC-----ATA---TGCtta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623849 76 -  35494412 C----ATTAT---CAA-Cgt--------t--------------ta------------tttagtattttctattttact-g-tt--a--aata-----tgctta-tatttctaaaat------ttgatttt-t-----a--------t-c------gc
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660684 66 -   1390856 C----ATTTT---CAA-TGT--------T-------------TTA------GTATTT----------GCCATTTTA-C-T-GTTAA-----At---atgcttc-tatttctaaaat------t--------t-----a--------t-c------ac
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135476 66 -    198055 C----ATTTT---CAA-TGA--------T-------------TTA------GTATTT----------GCCATTTTA-C-T-GTTAA-----At---atgctta-tatttctaaaat------t--------t-----a--------t-c------ac
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2049 78 +     19438 CAT-TA---T---CAG-Tgt--------t-------------tta---------gtatttagtatttgcCATCATA-C-A-GTTGA-----AT---atgctta-tatttctaaaat-tttatt--------t-----a--------t-t------ga
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238079 73 -    607251 C----ATTAT---CGA-TGT--------T-------------TCA------GTATTT----------GCTGTTTTGCT-C-TT--A-----A--ACTTGctta-tatttctaaaat------gttatttt-t-----a--------t-t------gc
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906208 75 +  41312741 T----A---T---CAG-Tgt--------t-------------tta---------atatttagtatttaccACTTTA-C-T-GTTAA-----AT---GTGCTTA-CATTTCTCAAatttg-att--------t-----a--------t-c------ac
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                             12573613 41 +  14770903 C----A---T---CAA-TGT--------T-------------TTA------GTATTT--T-GTATTTGCCATTTTC-C-T-GTTA------------------------------------------------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 34
s Equus_asinus.JREZ01000139.1                              3037641 78 -   4378816 C----ATGTT---CCA-TGT--------G-------------TTA------GTATTCAGTA-T-TT-GCCATTTTA-C-T-GTTAA-----AT-A--Cgctta-tatttctaaaat------t--------tgattcg--------t-c------ac
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371575 78 +  39960074 C----ATGTT---CCA-TGT--------C-------------TTA------GTATTCAGTA-T-TT-GCCATTTTA-C-T-GTTAA-----AT-A--tgctta-tatttctaaaat------t--------tgattca--------t-c------ac
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408361 78 -    498745 C----ATGTT---CCA-TGT--------C-------------TTA------GTATTCAGTA-T-TT-GCCATTTTA-C-T-GTTAA-----AT-A--tgctta-tatttctaaaat------t--------tgattca--------t-c------ac
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258680 78 +  21539334 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63400 76 -    133382 C----ATTAT---CAA-CGT--------T--------------TA-------T-TT-AGTACT-T--GCCATTTTACT-G-TT--A--AATA-----TGCtta-tatttctaaaat------ttgatttt-t-----a--------t-c------ac
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3616 76 +      7672 C----ATTGT---TAA-CGT--------T--------------TA-------T-TT-AGTACT-T--GCTATTTTACT-G-TT--A--AATA-----TGCtta-tatttctaaaat------ttgatttt-t-----a--------t-c------gc
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11783 71 -     24895 C----A---TTAGTAA-TGT--------T-------------TTAGTATTA----------------GCTATTTTA-T-T-GTTAC-----ATA---tactta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39495 71 -     70999 C----A---TTAGtaa-tgt--------t-------------ttagtatta----------------gctatttta-t-t-gttac-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83455 71 +    112731 C----A---TTAGtaa-tgt--------t-------------ttagtatta----------------gctatttta-t-t-gttac-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40027 71 +     68309 C----A---TTAGtaa-tgt--------t-------------ttagtatta----------------gctatttta-t-t-gttac-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50352 71 -     65740 C----A---TTAGTAA-TGT--------T-------------TTAGTATTA----------------GCTATTTTA-T-T-GTTAC-----ATA---TGCtta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                20982 71 -     75513 C----A---TTAGTAA-TGT--------T-------------TTAGTATTA----------------GCTATTTTA-T-T-GTTAC-----ATA---TGCtta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45175 71 -     97555 C----A---TTAGTAA-TGT--------T-------------TTAGTATTA----------------GCTATTTTA-T-T-GTTAC-----ATA---TGCtta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1900 71 +     30972 C----A---TTAGtaa-tgt--------t-------------ttagtatta----------------gctatttta-t-t-gttac-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39625 71 -     52037 C----A---TTAGtaa-tgt--------t-------------ttagtatta----------------gctatttta-t-t-gttac-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56026 71 -    111500 C----A---TTAGTAA-TGT--------T-------------TTAGTATTA----------------GCTATTTTA-T-T-GTTAC-----ATA---tactta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242647 74 - 206538554 T----C---T---CAG-TGT--------T-------------CTA------ATATTTAGTA-TCT--GCCATTTTG-T-C--TTAA-----TT---GTGCTAG-AATTTCTAAAAT-TTGATT--------T-----A--------A-T------ac
i Felis_catus.CM001381.2                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                          185112429 74 - 205367284 T----C---T---CAG-TGT--------T-------------CTA------ATATTTAGTA-TCT--GCCATTTTG-T-C--TTAA-----TT---GTGCTag-aatttctaaaatttg-att--------t-----a--------a-t------ac
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23777 74 -     30238 T----C---T---CAG-TGT--------T-------------CTA------ATATTTAGTA-TCT--GCCATTTTG-T-C--TTAA-----TT---GTGCTAG-AATTTCTAAAAT-TTGATT--------T-----A--------A-T------AC
i Felis_nigripes.FelNig_flattened_line_31944             I 3 C 0
s Galago_moholi.ctg3793                                     119209 71 -    137831 T----A---TTATTTA-CGT--------T-------------TTAGTATTG----------------GCTATTTTA-T-T-ATTAC-----ATA---TGCATA-TATTTGTAAAAT------T--------T-----GATCTC---T-T------GC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             2749 71 +     22493 T----A---TTATTTA-CGT--------T-------------TTAGTATTG----------------GCTATTTTA-T-T-ATTAC-----ATA---TGCATA-TATTTGTAAAAT------T--------T-----GATCTC---T-T------GC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            14942 71 -     32986 T----A---TTATTTA-TGT--------T-------------TTAGTATTG----------------GCTATTTTG-T-T-ATTAC-----ATA---TGCATA-TATTTGTAAAAT------T--------T-----GATCCA---T-T------GC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               14990 78 +     18121 C----A---TTATCTA-TGT--------T-------------TTAGTATTT--A----GTA-T-TT-GCtatttta-t-t-gttaa-----ata---tgctta-tatttttaaagt------t--------t-----aattta---t-t------gt
i Galeopterus_variegatus.GalVar_scaffold_74466           I 1 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89757 73 -     95226 C----ATTAT---CAA-TGT--------T-------------TCA------GTATTT----------GCTATTTTACT-C-TT--A-----A--GCTTgctta-tatttctaaaat------tttatttt-t-----g--------t-t------gc
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Gorilla_beringei.k141_3358224                                791 77 -      1229 G----A---GTATCCA-TGGCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATA----GCTTC-TATTTCTAACAT------T--------T-----GATTTA---C-T------GC
i Gorilla_beringei.k141_3358224                          I 1 I 30
s Gorilla_gorilla.LT578341.1                                250285 77 - 186649187 G----A---GTATCCA-TGGCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATA----GCTTC-TATTTCTAACAT------T--------T-----GATTTA---C-T------GC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11716 71 -     40692 C----A---TTGGtaa-tgt--------t-------------ttagtatta----------------gctatttta-t-t-gttac-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33118 71 +     49394 C----A---TTGGtaa-tgt--------t-------------ttagtatta----------------gctatttta-t-t-gttac-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              57986 71 -     66874 C----A---TTGGtaa-tgt--------t-------------ttagtatta----------------gctatttta-t-t-gttac-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6863 71 -     42923 C----A---TTGGtaa-tgt--------t-------------ttagtatta----------------gctatttta-t-t-gttac-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13859 71 -     53142 C----A---TTGGtaa-tgt--------t-------------ttagtatta----------------gctatttta-t-t-gttac-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26541 75 -    327341 T----C---T---CAG-TGT--------T-------------TTA------ATATTCAGTA-TCT--GCCATTTTG-T-T-GTTAA-----TT---GTGCTGG-AATTTCCAAAAT-GTGATT--------T-----A--------T-T------AC
i Helogale_parvula.HelPar_flattened_line_2585            I 3 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7507 76 +     48891 C----ATTAT---CAA-TGT--------T-------------TCA------GTATTT----------GCTATTTGACT-C-TT--A-----A--ATTTGCTTA-TATTTCTAAAAT------T-TTTTTGTT-----G-----TTGT-T------GC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11001 69 +     12639 T----G---T---CACCAGC--------C-------------TTA------G------G--GT-TT-GCCATTTTG-C-T-GTTAA-----AT---GTACTTA-TATTTCTAAAAC------T--------T-----GA-------T-T--TGTCCC
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6100 82 -     36432 C----ATTAT---CAA-ATT--------T--------------TA------GTATTTAGTAGTATTTGCTATTTTACT-G-TC--A--AAta-----tgctta-cat-tctaaaat------ttgatttttt-----a--------t-t------gc
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1545948 71 -   1711038 CAT-TA---T---CAG-TGT--------T-------------T--------G-A----GTA-T-TT-GCCATTTTA-C-T-GTTaa-----at---atgctta-tatttttaaaatttg-att--------c-----a--------t-T------GC
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45256 71 +     49977 CAT-TA---T---CAA-TGT--------T-------------T--------G-A----GTA-T-TT-GCCATTTTA-C-T-GTTAC-----AT---GTGCTTA-TATTTTTAAAAT-TTGATT--------C-----A--------T-T------GC
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138185 64 -    630532 G----A---GTATCCC-TGCCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATA---CACTTC-TATTTCTAAC-------------------------------------------
i Hoolock_leuconedys.ctg274                                 C 0 I 9
s Hyaena_hyaena.HyaHya_flattened_line_14808                  64990 75 +     83186 T----C---T---CAG-TGT--------T-------------TTA------ATATTTAGTA-TCT--GCCATTTTG-T-T-GTTAA-----TT---GTGCTTG-AATTTCTAAAAT-CTGATT--------T-----A--------T-T------AT
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 287 C 0
s Hylobates_agilis.k141_1155965                               1213 64 +     12352 G----A---GTATCCC-TGCCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATA---CGCTTC-TATTTCTAAC-------------------------------------------
i Hylobates_agilis.k141_1155965                          C 0 I 14
s Hylobates_klossii.k141_738755                               8396 64 +     55766 G----A---GTATCCC-TGCCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATA---CGCTTC-TATTTCTAAC-------------------------------------------
i Hylobates_klossii.k141_738755                          C 0 I 14
s Hylobates_pileatus_b.LG02                                       2047740 64 + 191637585 G----A---GTATCCC-TGCCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATA---CGCTTC-TATTTCTAAC-------------------------------------------
i Hylobates_pileatus_b.LG02                                     C 0 I 9
s Hylobates_pileatus_a.tarseq_633                            7797072 64 +  11177569 G----A---GTATCCC-TGCCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATA---CGCTTC-TATTTCTAAC-------------------------------------------
i Hylobates_pileatus_a.tarseq_633                          C 0 I 9
s Ictidomys_tridecemlineatus.JH393364.1                     375113 36 +   7955117 T----G---T---TGA-TGT--------T-------------Tta----------------gtatttgaaatttta-c-t-gctgt-----a-----------------------------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 22
s Indri_indri.k141_1634743                                     134 71 -      1784 C----A---TTAGtaa-tgt--------t-------------ttagtatta----------------gctatttta-t-t-gttac-----ata---tgctta-tatttctaaaat------t--------t-----gattca---t-t------ac
i Indri_indri.k141_1634743                               N 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1636 76 -     16823 A----ATTAT---CAA-CGT--------T--------------TA-------T-TT-AGTA-T-TT-GCTATTTCACT-G-TT--A--AATA-----TGCTTA-TATTTCTAAAAT------T-TGATTTCT-----A--------T-C------GC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64125 76 -     97402 C----ATTAT---CAA-CGT--------T--------------TA-------T-TT-AGTA-T-TT-GCTATTTTACT-G-TT--A--AATA-----TGCTTA-TATTTCTAAAAT------T-TGATTTTT-----A--------T-C------GC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39523 78 +    110728 C----A---GTATCCC-TGTCATGCTA-T-------------TTAGCATTT----------------GTTATCTAG-C-T-GTTAC-----ATA---CACCTC-TATTTCTAACAT------T--------T-----GATTTA---C-T------CC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59122 41 -     65777 C----A---T---CAA-TGT--------T-------------TCA------GTATTT--T-GTATTTGCCATTTTC-C-C-GTTA------------------------------------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 34
s Lemur_catta.scaffold_24                                 14756508 71 +  30322482 C----A---TTGGtaa-tgt--------t-------------ttagtatta----------------gctatttta-t-t-gttac-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         229 77 -     13097 T----G---GTATCCC-TGTCATGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TGTTTCTA-CAT------T--------T-----GATTTA---C-T------CC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            180 77 +      5940 T----G---GTATCCC-TGTCATGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TGTTTCTA-CAT------T--------T-----GATTTA---C-T------CC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6432 78 -     11567 C----G---GTATCCC-TGTCATGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GCTAC-----ATA---CACTTC-TATTTCTAACAT------T--------T-----GATTTA---C-T------CC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7813 78 -     12945 C----G---GTATCCC-TGTCATGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GCTAC-----ATA---CACTTC-TATTTCTAACAT------T--------T-----GATTTA---C-T------CC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5164 64 +     29618 ---------TTAGTAA-TGT--------T-------------TTAGAATTA----------------GC-----TA-T-T-ATTAC-----ACA---TGCtta-tatttctaaaat------a--------t-----gattta---t-a------gc
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5163 64 +     31569 ---------TTAGTAA-TGT--------T-------------TTAGAATTA----------------GC-----TA-T-T-GTTAC-----ACA---TGCtta-tatttctaaaat------a--------t-----gattta---t-a------gc
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5169 64 +     24756 ---------TTAGTAA-TGT--------T-------------TTAGAATTA----------------GC-----TA-T-T-Gttac-----ata---tgctta-tatttctaaaat------a--------t-----gattta---t-a------gc
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5168 64 +     16388 ---------TTAGTAA-TGT--------T-------------TTAGAATTA----------------GC-----TA-T-T-GTTAC-----ACA---TGCtta-tatttctaaaat------a--------t-----gattta---t-a------gc
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809300 75 -   3914936 T----C---T---CAG-tgt--------t-------------tta---------atatttagtatttaccATTTTA-C-T-GTTAa-----at---gtgcttt-catttctaaaatttg-att--------t-----a--------t-c------ac
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lipotes_vexillifer.KE559953.1                             333159 76 +    662738 C----ATTAT---CAa-cgt--------t--------------ta------------tttattatttgatattttact-g-tt--a--aata-----tgctta-tatttctaaaat------ttgatttt-t-----a--------t-c------ac
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328860 78 -   1826925 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2187 71 +     19643 T----T---TTATTCA-TGT--------T-------------TTAGTATTG----------------GATATTTTA-T-T-ATTAC-----ATA---TGCATA-TATTTGTAAAAT------T--------T-----GATGTA---T-T------GC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5035845 71 -   6120653 T----T---TTATTCA-TGT--------T-------------TTAGTATTG----------------GATATTTTA-T-T-ATTAC-----ATA---TGCATA-TATTTGTAAAAT------T--------T-----GATGTA---T-T------GC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39076167 69 +  43346337 C----A---T---TATCCGT--------T-------------TTA------GTATTT----------GCCATTTTA-C-T-GTTAA-----AT-A--TGCTTA-TATTTCTAAAAT------T--------T-----GA-------T-T--CGCCAC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41610470 75 +  59628241 T----C---T---CAG-TGT--------T-------------TTC------CTATTTAGTA-T-TT-GCCATTTTA-C-T-gttaa-----at---atgattt-aatttctaaaatttg-att--------t-----a--------t-c------ac
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_1757516                              41141 67 -     61512 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G----------------------------------
i Macaca_arctoides.k141_1757516                          C 0 I 10
s Macaca_assamensis.Contig5                                 368769 67 -  60120075 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G----------------------------------
i Macaca_assamensis.Contig5                              C 0 I 10
s Macaca_cyclopis.k119_263443                                21088 78 +     30207 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18191 78 -     24934 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 20975 78 +     30527 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32164 78 -     50087 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41902 78 +     51645 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCACTTTG-C-T-Gttac-----ata---cgcttc-tatttctaacat------g--------c-----gattta---c-t------gc
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410476 78 - 187317192 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395359 78 +  25927173 C----A---GTATCCC-TGGCATGCTA-T-------------Ttagtattt----------------gtcattttg-c-t-gTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44491 78 -     62418 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCACTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21178 78 +     24253 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 40935 78 +     59329 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266767 78 +    668171 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18113 78 +     21031 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31845 78 +     33478 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219121 78 -    270270 CAT-TA---T---CAA-TGT--------T-------------TTA------ATATTTAGTA-T-TT-GCCATCATG-C-T-GTTGA-----AT-A--TACTTG-TATTTTTAAAAT-TTGATT--------T-----A--------T-T------GA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318243 78 +  24302211 C----A---GTATCCC-TGGCATACTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353075 78 -    752769 C----A---GTATCCC-TGGCATACTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669856 76 -    737560 T----A---T---AAC-TGT--------T-------------TTA------GCATTTAGTA-T-TT-ACCATTTTA-C-T-GTTAA-----AT-A--TGCTTA-TATttctaaaatctgtatt--------t-----a--------t-C------GC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217150 76 +    317179 T----C---T---AAG-TGT--------T-------------TTA------GCATTTAGTA-T-TT-ACCATTTTA-C-T-GTTAA-----AT-A--TGCTTA-TATTTCTAAAATCTGTATT--------T-----A--------T-C------GC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7489206 36 +  40650429 T----G---C---TGA-TGT--------T-------------TTA------GTATTT----------GAAATTTTA-C-T-GCTGT-----A-----------------------------------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 22
s Megaderma_lyra.MegLyr_scaffold_4542                       146198 71 +    207569 CAT-TA---T---CAA-TAT--------T-------------TTA------GTATTT----------GCCATTTTA-T-T-ATTAA-----AT-A--TGCCTA-TATTTCTACAAT-TTTACT--------C-----A--------T-T------GG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14220 75 -     74585 T----A---T---CAG-TGT--------T-------------TTA------ATATTTAGTA-T-TT-ACCACTTTA-C-T-GTTAA-----AT---GTGCTTA-CATTTCTCAAAT-TTGATT--------T-----A--------T-C------AC
i Mellivora_capensis.MelCap_flattened_line_19308         I 3 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79703 76 +     93471 C----ATTAT---CAA-CGT--------T--------------TA-------T-TT-AGTA-T-TT-GCTATTTTACC-G-TT--A--AATA-----TGCtta-tatttctaaaat------ttgatttt-t-----a--------t-c------gc
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 6191 78 +     17804 C----A---GTATCCC-TGTCACGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTCTAACAT------G--------T-----GATTTA---C-T------CC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               6964 78 -     12984 C----A---GTATCCC-TGTCACGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTCTAACAT------G--------T-----GATTTA---C-T------CC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     14926 78 -     26561 C----A---GTATCCC-TGTCACGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTCTAACAT------G--------T-----GATTTA---C-T------CC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980766 64 +  93316391 ---------TTAGTAA-GGT--------T-------------TTAGAATTA----------------GC-----TA-T-T-Gttac-----ata---tgcttt-tatttctaaaac------t--------t-----gaTTTA---T-T------GC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180435 41 +    200668 C----A---T---CAG-TTT-------TT-------------TTA------CTCCTGAGT-GT-TT-GCCATT-C--A-TTGTTC------------------------------------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 31
s Miopithecus_ogouensis.k141_1534655                         18154 78 -     27822 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTACTT----------------GTCATTTCG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4316 75 +     27589 T----C---T---CAG-TGT--------T-------------TTA------ATATTTAGTA-T-TT-ACCATTTTA-C-T-GTTAA-----AT---GTGCTTT-CATTTCTAAAAT-TTGATT--------T-----A--------T-C------AC
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 3 C 0
s Mirza_zaza.k141_766280                                     48627 64 -     62432 ---------TTAGTAA-TGT--------T-------------TTAGAATTA----------------GC-----TA-T-T-GTTAC-----Ata---tgcttt-tatttctaaaat------t--------t-----gattta---t-t------gc
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351592 76 +    437263 C----ATTGT---CAA-CGT--------T--------------TA-------T-TT-AGTA-T-TT-TCTATTTTACT-G-TT--A--AATA-----TGCtta-tatttctaaaat------ttgatttt-t-----a--------t-c------gc
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174605 41 +    366855 C----A---T---CAA-TGT--------T-------------TTA------GCATTTAGTA-T-TT-GCCATTTT--ATT-GTTA------------------------------------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 31
s Moschus_moschiferus.MosMos_scaffold_13123                  22662 73 -     82753 C----ATTGT---CGC-TGT--------T-------------TCA------GTATTT----------GCTATTTTACT-C-TT--A-----A--ATTTGCTTA-CATTTCTAAAAT------T-TTATTTTT-----A--------T-T------GC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14310 75 -     63510 T----C---T---CAG-TGT--------T-------------TTA------ATATTTAGTA-TCT--GCCATTTTG-T-T-GTTAA-----TT---GTGCTGG-AATTTCCAAAAT-GTGATT--------T-----A--------T-T------GC
i Mungos_mungo.MunMun_flattened_line_18455               I 3 C 0
s Murina_feae.MurFea_scaffold_17764                          33536 41 +     47283 C----A---T---CAA-TGT--------T-------------TTA------GTATTTCGTACT-T--GCCATTTTA-C-T-GTTA------------------------------------------------------------------------
i Murina_feae.MurFea_scaffold_17764                      C 0 I 34
s Mustela_putorius.JH418006.1                             14343264 75 +  14710649 T----A---T---CAG-tgt--------t-------------tta---------atatttagtatttaccACTTTA-C-T-GTTAA-----AT---GTGCTTA-CATTTCTCAAatttg-att--------t-----a--------t-c------ac
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myotis_brandtii.KE162005.1                               9787969 41 +  10118263 C----A---T---CAA-TGT--------T-------------TTA------GTATTT--T-GTACTTGCCATTTTA-C-T-GTTA------------------------------------------------------------------------
i Myotis_brandtii.KE162005.1                             C 0 I 34
s Myotis_davidii.KB100139.1                                4378380 41 +   6019432 C----A---T---CAA-TGT--------T-------------TTA------GTATTT--T-GTACTTGCCATTTTA-C-T-GTTA------------------------------------------------------------------------
i Myotis_davidii.KB100139.1                              C 0 I 34
s Myotis_lucifugus.GL432175.1                                18593 41 -     39439 C----A---T---CAA-TGT--------T-------------TTA------GTATTT--T-GTACTTGCCATTTTA-C-T-GTTA------------------------------------------------------------------------
i Myotis_lucifugus.GL432175.1                            C 0 N 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1919 41 +      3929 C----A---T---CAA-TGT--------T-------------TTA------GTATTT--T-GTACTTGCCATTTTA-C-T-GTTA------------------------------------------------------------------------
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 I 34
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              109800 70 +    130748 C----A---T---TATCAAT--------C-------------TTG------GTATTT----------GCAATTTTA-C-T-ATTAA-----AT-A--TGCTTG-TCTTTCTAAAAC------T----TGATT-----TG-------T-T-----GGC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 6152
s Nasalis_larvatus.k141_1350636                              24519 78 +     34575 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAT-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464712 75 -  31847680 T----C---T---CAG-tgt--------t-------------tta---------atatttagtatttaccATTTTA-C-T-GTTAA-----At---gtgcttt-catttctaaaatttg-att--------t-----a--------t-c------ac
i Neomonachus_schauinslandi.NINY01007730.1               I 3 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225761 76 -   7148211 C----ATTAT---CAA-Cgt--------t--------------ta------------tttagtattttctattttact-g-tt--a--aata-----tgctta-tatttctaaaat------ttgatttt-t-----a--------t-c------ac
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122812 40 -    149072 C----A---T---CAG-TGT--------T-------------TTA------GTATTTAGTA-T-TT-GCCATGTT--A-T-GTTG------------------------------------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 31
s Nomascus_annamensis.k141_1771965                           49470 64 -    132029 G----A---GTATCCC-TGCCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATA---CACTTC-TATTTCTAAC-------------------------------------------
i Nomascus_annamensis.k141_1771965                       C 0 I 9
s Nomascus_concolor.k141_735679                               5566 64 -     16345 G----A---GTATCCC-TGCCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATA---CACTTC-TATTTCTAAC-------------------------------------------
i Nomascus_concolor.k141_735679                          C 0 I 9
s Nomascus_gabriellae.k141_57920                             11449 64 +     22201 G----A---GTATCCC-TGCCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATA---CACTTC-TATTTCTAAC-------------------------------------------
i Nomascus_gabriellae.k141_57920                         C 0 I 9
s Nomascus_siki_b.tarseq_93                            8409786 64 -  22158432 G----A---GTATCCC-TGCCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATA---CACTTC-TATTTCTAAC-------------------------------------------
i Nomascus_siki_b.tarseq_93                          C 0 I 9
s Nomascus_siki_a.k141_941534                                  21849 64 -     54323 G----A---GTATCCC-TGCCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATA---CACTTC-TATTTCTAAC-------------------------------------------
i Nomascus_siki_a.k141_941534                              C 0 I 9
s Nyctereutes_procyonoides.CAJHUB010000658.1                194086 75 +   9404916 T----C---T---CCG-TGT--------T-------------TTC------CTATTTAGTA-T-TT-GCCATTTTA-C-T-gttaa-----at---atgattt-aatttctaaaatttg-att--------t-----a--------t-c------ac
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 C 0
s Nycticebus_bengalensis.LG01                             93630960 71 + 196305487 T----T---TTATTCA-TGT--------T-------------TTAGTATTG----------------GCTATTTTA-T-T-ATTAC-----ATA---TGCATA-TATTTGTTAAAT------T--------T-----GATGTA---T-T------GC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              349 71 +      2758 T----T---TTATTCA-TGT--------T-------------TTAGTATTG----------------GCTATTTTA-T-T-ATTAC-----ATA---TGCATA-TATTTGTTAAAT------T--------T-----GATGTA---T-T------GC
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559240 71 - 199412804 T----T---TTATTCA-TGT--------T-------------TTAGTATTG----------------GCTATTTTA-T-T-ATTAC-----ATA---TGCATA-TATTTGTTAAAT------T--------T-----GATGTA---T-T------GC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447482 70 +   2017862 T----C---T---CAG-tgt--------t-------------tta---------atatttagtatttaccatttta-c-t-gttaa-----at---gtgcttt-catttctaaaat------t--------t-----a--------t-c------ac
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Odocoileus_virginianus.KZ100018.1                         434650 73 -    630418 C----ATTAT---CGA-TGT--------T-------------TCA------GTATTT----------GCTATTTTGCT-C-TT--A-----A--ACTTgctta-tatttctaaaat------gttatttt-t-----a--------t-t------gc
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12641 73 +    150152 c----attat---cAA-TGT--------T-------------TCA------GTATTT----------GCTATTTTACT-C-TT--A-----A--ACTTgctta-tatttctaaaat------tttatttt-t-----g--------t-t------gc
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8095031 76 +  10937097 C----ATTAT---CAA-CGT--------T--------------TA-------T-TT-AGTA-T-TT-GCTATTTTACT-G-TT--A--AATA-----Tgctta-tatttctaaaat------ttgatttt-t-----a--------t-c------ac
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35151 72 +    559221 T----C---T---CAG-TGT--------T-------------TTC------CTATTTAGTA-T-TT-GCCATTtta-c-t-gttaa-----at---at---tt-aatttctaaaatttg-att--------t-----a--------t-c------ac
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 C 0
s Otolemur_crassicaudatus.k141_85057                         22485 71 -     23432 T----A---TTATTTA-TGT--------T-------------TTAGTATTG----------------GCTATTTTA-T-T-ATTAC-----ATA---TGCATA-TATTTGTAAAAT------T--------T-----GATCTA---T-T------GC
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347050 71 +   1103335 t----a---ttattta-tgt--------t-------------ttagtattg----------------actatttta-t-t-attac-----ata---tacata-tatttgtaaaat------t--------t-----gaTCTA---T-T------GC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402627 76 -  44047080 C----ATTAT---CAA-TGT--------T-------------TCA------GTATTT----------GCTATTTGACT-C-TT--A-----A--ATTTgctta-tatttctaaaat------tttgttgt-t-----g-----ttgt-t------gc
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3146 76 +     17875 C----ATTAT---CAA-TGT--------T-------------TCA------GTATTT----------GCTATTTGACT-C-TT--A-----A--ATTTGCTTA-TATTTCTAAAAT------T-TTTTTTTT-----G-----TTGT-T------GC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.KZ622849.1                                 28757 78 -    110857 G----A---GTATCCG-TGGCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATA---CACTTC-TATTTCTAACAT------T--------T-----GATTTA---C-T------GC
i Pan_troglodytes.KZ622849.1                             I 34 I 44
s Panthera_onca.PanOnc_flattened_line_3271                   20365 74 -    230217 T----C---T---CAG-TGT--------T-------------CTA------ATATTTAGTA-TCT--GCCATTTTG-T-T--TTAA-----TT---GTGCTAG-AATTTCTAAAAT-TTGATG--------T-----A--------A-T------AC
i Panthera_onca.PanOnc_flattened_line_3271               I 3 C 0
s Panthera_pardus.KV860321.1                              18457691 74 -  18783137 T----C---T---CAG-TGT--------T-------------CTA------ATATTTAGTA-T--ctgccattttg-t-t--ttaa-----tt---gtgctag-aatttctaaaatttg-atG--------T-----A--------A-T------ac
i Panthera_pardus.KV860321.1                             I 3 C 0
s Panthera_tigris.KE722367.1                               3968419 74 +   8748460 T----C---T---CAG-TGT--------T-------------CTA------ATATTTAGTA-T--ctgccattttg-t-t--ttaa-----tt---gtgctag-aatttctaaaatttg-atG--------T-----A--------A-T------ac
i Panthera_tigris.KE722367.1                             I 2 C 0
s Pantholops_hodgsonii.KE114653.1                          1614073 73 +   2937107 C----ATTAT---CAG-TGT--------T-------------TCA------GTATTT----------GCTATTTGACT-C-TT--A-----A--ATTTgctta-tatttctaaaat------tttatttt-t-----g--------t-t------gc
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   239087 78 - 183742232 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5554 78 +     21308 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286591 78 -  20919399 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18207 78 -     27687 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11343 78 +     16796 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18153 78 -     23640 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----GATTTA---C-T------GC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11282 75 +     78924 T----C---T---TAG-TGT--------T-------------TTA------ATATTTAGTA-TCT--GCCATTTTG-T-T-GTTAA-----TT---GTGCTTG-AATttctaaaatttg-att--------t-----a--------t-c------ag
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 C 0
s Perodicticus_ibeanus.k141_1921260                          21049 71 +     31479 C----A---TTATTCA-TGT--------T-------------TTAGTATTG----------------GCTATTTTA-T-T-ATTAC-----ATA---TGCATA-TATTTGTAAAAT------T--------T-----GATCTA---T-T------GC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13420 71 -     24908 C----A---TTATTCA-TGT--------T-------------TTAGTATTG----------------GCTATTTTA-T-T-ATTAC-----ATA---TGCATA-TATTTGTAAAAT------T--------T-----GATCTA---T-T------GC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10889 76 -     15039 C----ATTAT---CAA-CGT--------T--------------TA-------T-TT-AGTA-T-TT-TCTATTTTACT-G-TT--A--AATA-----TGCtta-tatttctaaaat------ttgatttt-t-----a--------t-c------ac
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            4973 78 +      7560 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60680 78 -     63152 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43279 78 +     45295 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------A-----AATTTA---C-T------GC
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                     958 78 +      5735 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45807 41 +     46691 C----A---T---CAA-TGT--------T-------------TTA------GTATTT--T-GTATTTACCATTTTA-C-T-GTGA------------------------------------------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 I 34
s Pithecia_albicans.k141_1239476                             61159 78 +    207309 C----A---GCGTCCC-CGTCATGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTCTCACAT------T--------T-----GATTTA---C-T------CC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2279 78 -     25401 C----A---GCGTCCC-CGTCATGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTCTCACAT------T--------T-----GATTTA---C-T------CC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               27994 78 +     58159 C----A---GCGTCCC-CGTCATGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTACTCACAT------T--------T-----GATTTA---C-T------CC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28270 78 +     63561 C----A---GCGTCCC-CGTCATGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTACTCACAT------T--------T-----GATTTA---C-T------CC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28033 78 +     51148 C----A---GCGTCCC-CGTCATGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTACTCACAT------T--------T-----GATTTA---C-T------CC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553026 78 -   4542175 C----A---GCGTCCC-CGTCATGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTTCTCACAT------T--------T-----GATTTA---C-T------CC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28017 78 +     51125 C----A---GCGTCCC-CGTCATGTTA-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TATTACTCACAT------T--------T-----GATTTA---C-T------CC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           2973 76 -      8168 C----ATTAT---CAA-CAT--------T--------------TA-------T-TT-AGTA-T-TT-GCTATTTTACT-G-TT--A--AATA-----TGCtta-tatttctagaac------ttgatttt-t-----a--------t-c------gc
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4451 76 +     39866 ---------GTTCCCC-TGTCGTGTGA-T-------------TTAGTATTT----------------GTCATCTTG-C-T-GTCCC-----ATA---GGCTTC-TATTTCTAACAT------T--------T-----GACTTA---C-T------CC
i Plecturocebus_bernhardi.k141_2549090                   I 1 C 0
s Plecturocebus_caligatus.k141_1382851                       38939 76 -     87950 ---------ATTTCCC-TGTCGTGTGA-T-------------TTAGTATTT----------------GTCATCTTG-C-T-GTCCC-----ATA---GGCTTC-TATTTCTAACAT------T--------T-----GACTTA---C-T------CC
i Plecturocebus_caligatus.k141_1382851                   I 1 C 0
s Plecturocebus_cinerascens.k141_1164729                     39332 76 -     88961 ---------GTTCCCC-TGTCGTGTGA-T-------------TTAGTATTT----------------GTCATCTCG-C-T-GTCCC-----ATA---GGCTTC-TATTTCTAACAT------T--------T-----GACTTA---C-T------CC
i Plecturocebus_cinerascens.k141_1164729                 I 1 C 0
s Plecturocebus_cupreus.k141_2351393                          4032 76 -     39403 ---------GTTCCCC-TGTCGTGTGA-T-------------TTAGTATTT----------------GTCATCTTG-C-T-GTCCC-----ATA---GGCTTC-TATTTCTAACAT------T--------T-----GACTTA---C-T------CC
i Plecturocebus_cupreus.k141_2351393                     I 1 C 0
s Plecturocebus_dubius.k141_1058799                          38985 76 +     87928 ---------GTTCCCC-TGTCGTGTGA-T-------------TTAGTATTT----------------GTCATCTTG-C-T-GTCCC-----ATA---GGCTTC-TATTTCTAACAT------T--------T-----GACTTA---C-T------CC
i Plecturocebus_dubius.k141_1058799                      I 1 C 0
s Plecturocebus_grovesi.k141_2013005                          4029 76 -     60166 ---------GTTCCCC-TGTCGTGTGA-T-------------TTAGTATTT----------------GTCATCTTG-C-T-GTCCC-----ATA---GGCTTC-TATTTCTAACAT------T--------T-----GACTTA---C-T------CC
i Plecturocebus_grovesi.k141_2013005                     I 1 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      10965 76 -     67232 ---------GTTCCCC-TGTCGTGTGA-T-------------TTAGTATTT----------------GTCATCTTG-C-T-GTCCC-----ATA---GGCTTC-TATTTCTAACAT------T--------T-----GACTTA---C-T------CC
i Plecturocebus_hoffmannsi.k141_3303950                  I 1 C 0
s Plecturocebus_miltoni.k141_349282                          38881 76 -     90634 ---------GTTCCCC-TGTCGTGTGA-T-------------TTAGTATTT----------------GTCATCTTG-C-T-GTCCC-----ATA---GGCTTC-TATTTCTAACAT------T--------T-----GACTTA---C-T------CC
i Plecturocebus_miltoni.k141_349282                      I 1 C 0
s Plecturocebus_moloch.k141_1031110                          40349 76 +     89403 ---------GTTCCCC-TGTCGTGTGA-T-------------TTAGTATTT----------------GTCATCTTG-C-T-GTCCC-----ATA---GGCTTC-TATTTCTAACAT------T--------T-----GACTTA---C-T------CC
i Plecturocebus_moloch.k141_1031110                      I 1 C 0
s Pongo_abelii.CM009266.2                                   173290 78 - 189387572 G----A---GTATCCC-TGGCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATC---CACTTC-TGCTTCTAACAT------T--------T-----GATTTA---C-T------GC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188288 78 -   9816681 G----A---GTATCCC-TGGCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATC---CACTTC-TGCTTCTAACAT------T--------T-----GATTTA---C-T------GC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23459 78 +     69807 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40654 78 -     80239 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8158 82 +     14086 T----G---T---TACCAGC--------CTTGAAAGCCAACCTTA------G------G--GT-TT-GCCATTTTG-C-T-GTTAA-----AT---Gtactta-tatttctaaaat------t--------t-----ga-------t-ttgt-c-cc
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979666 71 +   4620579 C----A---TTGGTAA-TGT--------T-------------TTAGTATTa----------------gctatttta-t-t-gttat-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------GC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562243 71 -   2598838 C----A---TTAGTAA-TGC--------T-------------TTAATATTG----------------gctatttta-t-t-gttat-----ata---tgctta-tatttctaaaat------t--------t-----gattTA---T-T------AC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_162402                            841 71 -      1093 C----A---TTAGtaa-tgc--------t-------------ttagtatta----------------gctatttta-t-t-gttat-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------ac
i Propithecus_coronatus.k141_162402                      I 248 I 30
s Propithecus_diadema.k141_153680                              485 71 -     11706 C----A---TTAGtaa-tgc--------t-------------ttaatattg----------------gctatttta-t-t-gttat-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------ac
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4220 71 -     30655 C----A---TTAGTAA-TGt--------t-------------ttaatattg----------------gctatttta-t-t-gttat-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------ac
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30545 71 +     46564 C----A---TTAGtaa-tgc--------t-------------ttaatattg----------------gctatttta-t-t-gttat-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------ac
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90836 71 -     98465 C----A---TTAGtaa-tgc--------t-------------ttagtgtta----------------gctatttta-t-t-gttat-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------ac
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4458 71 +     35169 C----A---TTAGtaa-tgc--------t-------------ttaatattg----------------gctatttta-t-t-gttat-----ata---tgctta-tatttctaaaat------t--------t-----gattta---t-t------ac
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47682 41 -     66298 C----A---T---CAA-TGT--------T-------------TTA------GTATTTA---gtgtttgccatttt--att-gtta------------------------------------------------------------------------
i Pteronotus_parnellii.KE847780.1                        C 0 I 31
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4359 75 -     10349 T----A---T---CAG-TGT--------T-------------TTA------ATATTTAGTACT-T--ACCACTTTA-C-T-GTTAA-----AT---GTGCTTA-CATTTCTCAAAT-TTGATT--------T-----A--------T-C------AC
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 3 C 0
s Pteropus_alecto.KB030862.1                               5836594 78 -  28871421 cat-ta---t---taa-tgt--------t-------------tta---------atatttagtatttgccATCATA-C-T-GTTGA-----AT-A--tgctta-tatttctaaaatttg-att--------t-----a--------t-t------ga
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533169 78 -   4952924 CAT-TA---T---TAA-Tgt--------t-------------tta---------gtatttagtatttgcCATCATA-C-T-GTTGA-----AT-A--tgctta-tatttctaaaatttg-act--------t-----a--------t-t------ga
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095243 74 +  38429054 T----C---T---CAG-TGT--------T-------------CTA------ATATTTAGTA-TCT--GCCATTTTG-T-C--TTAA-----TT---GTGCtag-aatttctaaaatttg-att--------t-----a--------a-t------ac
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51607 73 +     55069 C----ATTAT---CGA-TGT--------T-------------TCA------GTATTT----------GCTATTTTGCT-C-TT--A-----A--ACTTGCTTA-TATTTCTAAAAT------G-TTATTTTT-----A--------T-T------GC
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909243 71 +   3329780 CAT-TA---C---CAA-TAT--------T-------------T---------TA----GTA-T-TT-GCCATTTTA-C-T-GTTAA-----AT-A--tgctta-tatttctaaaatttg-att--------c-----a--------t-t------tc
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24677 78 +     27361 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAT-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118036 78 + 195417433 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAT-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232285 78 -   7961872 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAT-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70639 78 -    116970 CAT-TA---T---TAG-TGT--------T-------------TTA------GTACTTAGTA-T-TT-GCCATCATA-C-T-GTTGA-----AT-A--TGCtta-tatttctaaaatttg-att--------t-----a--------t-t------ga
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                156 77 +     27962 T----G---GTATCCC-TGTCATGTTG-T-------------TTAGTATTT----------------GCTATCTTG-C-T-GTTAC-----ATA---CACTTC-TGTTTCTA-CAT------T--------T-----GATTTA---C-T------CC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              156 77 +      6077 T----G---GTATCCC-TGTCATGTTA-T-------------TTCGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TGTTTCTA-CAT------T--------T-----GATTTA---C-T------CC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              177 77 +      5971 T----G---GTATCCC-TGTCATGTTG-T-------------TCAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ACA---CACTTC-TGTTTCTA-CAT------T--------T-----GATTTA---C-T------CC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                229 77 +      5932 T----G---GTATCCC-TGTCATGTTG-T-------------TCAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TGTTTCTA-CAT------T--------T-----GATTTA---C-T------CC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               382 75 -      2099 ---------GTATCCC-TGTGATGTTG-T-------------TCAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TGTTTCTA-CCT------T--------T-----GATTTA---C-T------GC
i Saguinus_labiatus.k141_1571581                         N 0 C 0
s Saguinus_midas.LG03                                       387415 77 - 209938924 T----G---GTATCCC-TGTCATGTTG-T-------------TTAGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TGTTTCTA-CAT------T--------T-----GATTTA---C-T------CC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 182 75 +      5979 ---------GTAACCC-TGTGATGTTG-T-------------TCAGTATTT----------------GTTACGTTG-C-T-GTTAC-----ATA---CACTTC-TGTTTCTA-CCT------T--------C-----GATTTA---C-T------CC
i Saguinus_mystax.k141_8077960                           N 0 C 0
s Saguinus_oedipus.k141_1466288                                555 77 -      4301 T----G---GTATCCC-TGTCATGTTA-T-------------TTCGTATTT----------------GTTATCTTG-C-T-GTTAC-----ATA---CACTTC-TGTTTCTA-CAT------T--------T-----GATTTA---C-T------CC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6216 73 +     16473 C----ATTAT---CAA-TGT--------T-------------TCA------GTATT----------CGCTATTTTACT-C-TT--A-----A--ATTTGCTTA-TATTTCTAAAAT------T-TTTTTTTT-----A--------T-T------GT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234645 78 +   5703754 C----A---GTATCCC-TGTCATGTTG-T-------------TTAGTAGCT----------------GTTATCTTG-C-T-GTTAC-----ATA---CAGTTC-TATTTCTAACAT------T--------T-----GATTTA---C-T------CC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4235 78 +     21866 C----A---GTATCCC-TGTCATGTTG-T-------------TTAGTAGCT----------------GTTATCTTG-C-T-GTTAC-----ATA---CAGTTC-TATTTCTAACAT------T--------T-----GATTTA---C-T------CC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112347 53 +    313613 T-GCTA---T---CAA-TAT--------T-------------TTA------GTATT-----------GTCATTTTC-C-T-ATTAA-----AT--------AA-AAATTTAGAAAT-----------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21167 78 +     27374 C----A---GTGTCCC-TAGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24682 78 +     58920 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11179 78 -     45317 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18836 78 -     42441 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21518 78 -     29113 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24590 78 -     48123 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-ATTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854341 54 -   1910179 A----A---T---CAG-TAT--------A-------------TCA------GTAT------------GTCATTTTG-C-T-CTTAA-----AT-A--TGCTTA-TGTTTCTGAAAT-----------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855490 36 +   3870691 T----G---T---TGA-TGT--------T-------------Tta----------------gtatttgaaatttta-c-t-GCTGT-----A-----------------------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 22
s Spilogale_gracilis.SpiGra_flattened_line_13525              2213 75 -     97271 T----C---T---CAG-TGT--------T-------------TTA------ATAATCAGTA-T-TT-ACTGTTTTA-C-T-GTTAA-----AT---GTGCTTA-TATTTCTAAAAT-TTGATT--------T-----A--------T-C------AC
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120909 63 +    196729 T----C---T---CAG-TGT--------T-------------TTA------ATATTTAGTA-TCT--GCCATTTTG-T-T-GTTAA-----TT---GTGCTGG-AATTTCCAAAAT-----------------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 I 8
s Sus_scrofa.CM000828.4                                    6639632 84 +  69701581 C----ATAAT---CAG-TGT--------T-------------TTA------GTGTTTAGTA-T-TT-GCCATTTTACT-G-CT--A--AATA-----TGCTTG-TATTtccaaaat------ttgatt---t-----t--------t-ttttaccac
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386762 78 +   1523678 G----A---GTATCCC-TGCCATGTTA-T-------------TTAGTATTT----------------GTTATTTTG-C-T-ATTAC-----ATA---CGCTTC-TATTTCTAACAT------T--------T-----GATTTA---C-T------GC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_67439                24752 70 -     25844 C----A---T---TATCAAT--------C-------------TCG------GTATTT----------GCAATTTTA-C-T-ATTAA-----AC-A--TGCTTG-TCTTTCTAAAAC------T----TGATT-----TG-------T-T-----GGC
i Tamandua_tetradactyla.TamTet_scaffold_67439            C 0 N 0
s Tapirus_indicus.TapInd_scaffold_7432                      187419 66 +    199430 c----atttt---GAA-TGT--------T-------------TTA------GTATTT----------GCCATTTTA-C-T-GTTAA-----GT-A--TGCTTA-TATTTCTAAAAT------T--------T-----A--------T-C------AC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101374 66 -    539355 C----ATTTT---CAA-TGT--------T-------------TTA------GTATTT----------GCCATTTTA-C-T-GTTAA-----GT-A--TGCTTA-TATTTCTAAAAA------T--------T-----A--------T-C------AC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                3129 56 +      6850 T----A---TTATCAA-TGT--------T-------------TTAGTATTA----------------GCTATCTTT-C-T-GTTAC-----ATA---A-CTTA-TATTTCTAAA-------------------------------------------
i Tarsius_lariang.k141_1780720                           C 0 I 10
s Tarsius_wallacei.k141_226975                                3213 57 +     20590 T----A---TTATCAA-TGT--------T-------------TTAGTATTA----------------GCTATCTTT-C-T-GTTAC-----ATA---AACTTA-TATTTCTAAA-------------------------------------------
i Tarsius_wallacei.k141_226975                           C 0 I 10
s Theropithecus_gelada.CM009954.1                           349072 78 - 186847797 C----A---GTATCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-T-GTTAC-----ATA---CGCTTC-TATTTCTAACAT------G--------C-----AATTTA---C-T------GC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                    9826 66 -     31044 C----G---T---TATCAAT--------C-------------CTA------GTATTT----------TCAATTTTA-C-T-GTTAA-----AT-A--TGCTTA-TGTTTCTAAAAC------T--------T-----TG-------T-T-----AGC
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 6392
s Tonatia_saurophila.TonSau_scaffold_294                    475490 41 -    610378 A----A---T---CAA-TGT--------T-------------TTA------GTACGTAG-CGT-TT-GCCATTTT--A-TTGTTA------------------------------------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 I 6 I 32
s Trachypithecus_auratus.k141_1189070                        16731 78 +     26378 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTCA---C-T------GC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29412 78 -     78344 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTC----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTCA---C-T------GC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16052 78 +     25722 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTCA---C-T------GC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24275 78 -     62838 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24394 78 +     46913 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5202 78 -     28527 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26214 78 -     64340 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24251 78 -     63452 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5693 78 +     22490 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3313 78 +      4141 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTC----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTCA---C-T------GC
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6119 78 -     13050 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTC----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTCA---C-T------GC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251355 77 -   6242583 C----A---GTGTCCC-TGG-ATGCTA-T-------------TTAGTATTC----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTCA---C-T------GC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57088 78 +     59866 C----A---GTGTCCC-TGGCATGCTA-T-------------TTAGTATTT----------------GTCATTTTG-C-C-GTTAC-----GTA---CGCTTC-TATTTCTAACAT------G--------A-----GATTTA---C-T------GC
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478824 69 -  10818551 C----A---T---TATTAGT--------C-------------TTA------GTATTT----------Gccatttta-t-t-gttaa-----at---atgCtta-tatttctaaaac------t--------t-----ga-------t-ttgt-c-ac
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB338335.1                                  176 78 -       332 C----A---ATACCAA-TGT--------C-------------TTCATATTT--A----GT-GT-TT-GCAATTTTA-C-T-ATTAA-----ACA---TGCTTT-TGTTCTTACAAT------T--------T-----GGCTTA---T-T------AC
i Tupaia_chinensis.KB338335.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3333 78 -     70247 C----A---ATACCAA-TGT--------C-------------TTCATATTT--A----GT-GT-TT-GCAATGTTG-C-T-ATTAA-----ACA---CGCTTC-TGTTTTTACAAT------T--------T-----GCCTTA---T-T------AC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359770 76 -  33153633 C----ATTAT---CAA-CGT--------T--------------TA-------T-TT-AGTA-T-TT-GCTATTTTACT-G-TT--A--AATA-----Tgctta-tatttctaaaat------ttgatttt-t-----a--------t-c------gc
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103572 53 -    105689 TAC-TA---T---CAA-TGC--------T-------------TTA--------AT--A-T--T----GCCATTTTA-A-T-ATTAA-----AT--------CA-AAATTTAGAAAT-----------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177433 75 +   5085361 T----C---T---Cag-tgt--------t-------------tta---------atatttagtatttaccATTTTG-C-T-GTTAA-----AT---GTgctta-catttctaaaatttg-att--------t-----a--------t-c------ac
i Ursus_maritimus.KK499267.1                             I 3 C 0
s Varecia_rubra.k141_787544                                  21296 71 -     30710 C----A---TTAGTAA-TGT--------T-------------TTAGTGTTA----------------GCTATTTTA-T-T-GTAAC-----ATA---TGCtta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20204 71 -    147434 C----A---TTAGTAA-TGT--------T-------------TTAGTGTTA----------------GCTATTTTA-T-T-GTAAC-----ATA---TGCtta-tatttctaaaat------t--------t-----gattta---t-t------gc
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74856 80 +   5488506 C----ATGAT---CAG-TGT--------T-------------TTA------GTGTTTAGTA-T-TT-GCCATTTTA-C-T-TTTCA-----AT---GTGcttg-tatttctaaaat------ttgatttt-t-----g--------t-c------ac
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100832 75 -    112863 T----C---T---CAG-TGT--------T-------------TTC------CTATTTAGTA-T-TT-GCCATTTTA-C-T-GTTAA-----AT-A--TGATTT-AATTTCTAAAAT-TTGATT--------T-----A--------T-C------AC
i Vulpes_lagopus.VulLag_flattened_line_12041             I 3 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162404 27 -    224448 T----G---C---TGA-GGT--------T-------------TTA-------T-T--A-T--T-T--GCAATTTT----------------------------------------------------------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 19
s Zalophus_californianus.ZalCal_flattened_line_17732         24701 70 -     86975 T----C---T---CAG-TGT--------T-------------TTA------ATATTTAGTA-T-TT-ACCATTTTA-C-T-GTTAA-----AT---GTGCTTT-CATTTCTAAAAT------T--------T-----A--------T-C------AC
i Zalophus_californianus.ZalCal_flattened_line_17732     I 3 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2431392            266 76 +       382 C----ATTAT---CAA-CGT--------T--------------TA-------T-TT-AGTA-T-TT-GCTATTTTACT-G-TT--A--AATA-----TGCtta-tatttctaaaat------ttgatttt-t-----a--------t-c------gc
i Ziphius_cavirostris.ZipCav_flattened_line_2431392      C 0 C 0
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        511 3 +     36723 TTT
s Acinonyx_jubatus.LLWD01001279.1                           809062 3 +   1699592 ttt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410825 3 +  29979442 tat
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            211744 3 +    347723 ttt
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43822 3 +     53615 TTT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39637 3 +     44087 TTT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68556 3 -     84148 TTC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40779 3 -     78289 TTC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40227 3 +     55831 TTC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38668 3 -     64179 TTC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20311 3 -     24835 TTC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37294 3 +     45454 TTC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42993 3 +     70886 TTC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5120 3 +     30854 TTC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29259 3 +     42133 TTC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583765 3 +   2318259 ttt
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172532 3 -    412891 TTT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 31 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48864 3 -     68529 TTT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   47068 3 -     65372 TTT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40816 3 +     43593 TTT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668826 3 +   5030052 TTT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20468 3 -     23494 TTT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5604 3 +      8415 TTT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11778 3 -     32367 TTT
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 22 C 0
s Arctocebus_calabarensis.k141_1364444                       15699 3 -     45910 TTT
i Arctocebus_calabarensis.k141_1364444                   C 0 I 4
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   372 3 -     15198 TTT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 31 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271054 3 +  21539123 TTT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7225 3 +     48076 TTT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2359 3 -     28759 TTT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29911 3 +     44353 TTT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45286 3 -     71267 TTT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19342 3 -     33135 TTT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2449 3 +     11645 ttt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2451 3 -     19611 ttt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955597 3 -  23207421 ctt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2805 3 -      4711 ctt
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84762 3 +    124022 TTT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20293 3 +    288883 ttt
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354680 3 +  48749331 ttt
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753248 3 +   1948126 ttt
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543387 3 -  45695690 ttt
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528409 3 -   4408762 ttT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   4245 3 +     28062 TTT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39540 3 -     91139 TTT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17065 3 +     95584 TTT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16978 3 +    119600 TTT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              6161 3 -     13885 TTT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14847 3 +     17162 TTT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449803 3 + 189096842 TTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16096 3 -     18408 TTT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629598 3 +  17673402 tgt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663884 3 +   7040546 tgt
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207544 3 +   1652518 tgt
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501274 3 +  60362399 ttt
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4904 3 -     23171 TTT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218265 3 +   9314153 ttt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41611390 3 +  59632846 ttt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45102960 3 -  63665305 ttt
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407476 3 -  46296322 ttt
i Capra_aegagrus.CM003241.1                              I 13 C 0
s Capra_hircus.CM004588.1                                 26589749 3 +  44709034 ttt
i Capra_hircus.CM004588.1                                I 13 C 0
s Carlito_syrichta.NW_007259797.1                           265583 3 +    496798 ttt
i Carlito_syrichta.NW_007259797.1                        I 10 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                418 3 +      5315 TTT
i Carollia_perspicillata.CarPer_scaffold_170178          I 31 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75252 3 -    217609 ttt
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1381 3 -     12580 TTT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39267 3 +     53515 TTT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367499 3 -  26074798 TTT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4388 3 -     34880 TTT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63483 3 -     89041 TTT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13863 3 -     50533 TTT
i Cephalopachus_bancanus.k141_1275952                    I 10 C 0
s Ceratotherium_simum.JH767749.1                          15488463 3 -  27778364 tct
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15296 3 +     27315 tct
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136982 3 -   4669795 TTT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40723 3 +     47900 TTT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40555 3 -     44860 TTT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40537 3 -    148725 TTT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23523 3 -     40656 TTT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3531 3 +     20796 TTT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7786 3 -     17524 TTT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23478 3 -     34525 TTT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8198 3 -     25376 TTT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360675 3 -  39242232 TTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266503 3 +  21565898 TTT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27949 3 -     45857 TTT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23740 3 -     32606 TTT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27389 3 +     27662 TTT
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21439 3 +     70610 TTT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18304 3 +     36323 TTT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9282 3 -     19938 ctt
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 6382 C 0
s Cheirogaleus_major.k141_666340                             26867 3 -     33796 ttt
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1062 3 -     15404 ttt
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5346 3 -     32913 TTT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15759 3 -     40346 TTT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16023 3 +    216457 TTT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15802 3 +     39636 TTT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            235 3 +      5346 TTT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38887 3 -    112038 TTT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4459 3 +     34062 TTT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339202 3 +  18827391 TTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5811 3 -     44032 TTT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300528 3 - 135778131 TTT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405059 3 -   2368649 TTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374249 3 - 200372422 TTT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4943 3 -      6605 TTT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803345 1 +  53390261 --a
i Condylura_cristata.JH655891.1                          C 0 I 11
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8786 3 +     10921 ATT
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               300 3 +     87169 ttt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2105488 3 -   2246927 CTT
i Dasypus_novemcinctus.JH564415.1                        I 17525 C 0
s Daubentonia_madagascariensis.ctg71                        288894 3 +  12879189 ttt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623925 3 -  35494412 ctt
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660750 3 -   1390856 tct
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135542 3 -    198055 tct
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2127 3 +     19438 ttt
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238152 3 -    607251 ttt
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906283 3 +  41312741 ttt
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12573688 3 +  14770903 ttt
i Eptesicus_fuscus.JH977646.1                            I 34 C 0
s Equus_asinus.JREZ01000139.1                              3037719 3 -   4378816 ttt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371653 3 +  39960074 ttt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408439 3 -    498745 ttt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258758 3 +  21539334 TTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63476 3 -    133382 ctt
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3692 3 +      7672 ctt
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11854 3 -     24895 ttt
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39566 3 -     70999 ttt
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83526 3 +    112731 ttt
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40098 3 +     68309 ttt
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50423 3 -     65740 ttt
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21053 3 -     75513 ttt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45246 3 -     97555 ttt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1971 3 +     30972 ttt
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39696 3 -     52037 ttt
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56097 3 -    111500 ttt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242721 3 - 206538554 ttt
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112503 3 - 205367284 ttt
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23851 3 -     30238 TTT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     119280 3 -    137831 TTT
i Galago_moholi.ctg3793                                  C 0 I 4
s Galago_senegalensis.k141_991736                             2820 3 +     22493 TTT
i Galago_senegalensis.k141_991736                        C 0 I 4
s Galagoides_demidoff.k141_561628                            15013 3 -     32986 TTT
i Galagoides_demidoff.k141_561628                        C 0 I 4
s Galeopterus_variegatus.GalVar_scaffold_74466               15068 3 +     18121 ttt
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89830 3 -     95226 ttt
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Gorilla_beringei.k141_3358147                                862 3 -      8343 TTT
i Gorilla_beringei.k141_3358147                          I 72 C 0
s Gorilla_gorilla.LT578341.1                                250362 3 - 186649187 TTT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11787 3 -     40692 ttt
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33189 3 +     49394 ttt
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58057 3 -     66874 ttt
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6934 3 -     42923 ttt
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13930 3 -     53142 ttt
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26616 3 -    327341 TTT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7583 3 +     48891 TTT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11070 3 +     12639 TTC
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6182 3 -     36432 ttt
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546019 3 -   1711038 TTT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45327 3 +     49977 TTT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138258 3 -    630532 TTT
i Hoolock_leuconedys.ctg274                                 I 9 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65065 3 +     83186 TTT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 230
s Hylobates_agilis.k141_1155965                               1291 3 +     12352 TTT
i Hylobates_agilis.k141_1155965                          I 14 C 0
s Hylobates_klossii.k141_738755                               8474 3 +     55766 TTT
i Hylobates_klossii.k141_738755                          I 14 C 0
s Hylobates_pileatus_b.LG02                                       2047813 3 + 191637585 TTT
i Hylobates_pileatus_b.LG02                                     I 9 C 0
s Hylobates_pileatus_a.tarseq_633                            7797145 3 +  11177569 TTT
i Hylobates_pileatus_a.tarseq_633                          I 9 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375171 3 +   7955117 ttt
i Ictidomys_tridecemlineatus.JH393364.1                  I 22 C 0
s Indri_indri.k141_1634743                                     205 3 -      1784 ttt
i Indri_indri.k141_1634743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1712 3 -     16823 CTT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64201 3 -     97402 CTT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39601 3 +    110728 TTT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59197 3 -     65777 TTT
i Lasiurus_borealis.LasBor_scaffold_16567                I 34 C 0
s Lemur_catta.scaffold_24                                 14756579 3 +  30322482 ttt
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         306 3 -     13097 TTT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            257 3 +      5940 TTT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6510 3 -     11567 TTT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7891 3 -     12945 TTT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5228 3 +     29618 ttt
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5227 3 +     31569 ttt
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5233 3 +     24756 ttt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5232 3 +     16388 ttt
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809375 3 -   3914936 ttt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333235 3 +    662738 CTT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328938 3 -   1826925 TTT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2258 3 +     19643 TTT
i Loris_lydekkerianus.k141_2031736                       C 0 I 4
s Loris_tardigradus.ctg83                                  5035916 3 -   6120653 TTT
i Loris_tardigradus.ctg83                                C 0 I 4
s Loxodonta_africana.GL010049.1                           39076236 3 +  43346337 TTC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41610545 3 +  59628241 ttt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              41218 3 -     61512 TTT
i Macaca_arctoides.k141_1757516                          I 10 C 0
s Macaca_assamensis.Contig5                                 368846 3 -  60120075 TTT
i Macaca_assamensis.Contig5                              I 10 C 0
s Macaca_cyclopis.k119_263443                                21166 3 +     30207 TTT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18269 3 -     24934 TTT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21053 3 +     30527 TTT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32242 3 -     50087 TTT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41980 3 +     51645 ttt
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410554 3 - 187317192 TTT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395437 3 +  25927173 TGT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44569 3 -     62418 TTT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21256 3 +     24253 TTT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41013 3 +     59329 TTT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266845 3 +    668171 TTT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18191 3 +     21031 TTT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31923 3 +     33478 TTT
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219199 3 -    270270 TTT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318321 3 +  24302211 TTT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353153 3 -    752769 TTT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669932 3 -    737560 TTT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217226 3 +    317179 TTT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7489264 3 +  40650429 ttt
i Marmota_marmota.CZRN01000018.1                         I 22 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146269 3 +    207569 TTT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14295 3 -     74585 TTT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79779 3 +     93471 ctt
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 6269 3 +     17804 TTT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7042 3 -     12984 TTT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15004 3 -     26561 TTT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980830 3 +  93316391 TTT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180507 3 +    200668 TTT
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 31 C 0
s Miopithecus_ogouensis.k141_1534655                         18232 3 -     27822 TTT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4391 3 +     27589 TTT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     48691 3 -     62432 ttt
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351668 3 +    437263 ctt
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174677 3 +    366855 TTG
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 31 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22735 3 -     82753 TTT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14385 3 -     63510 TTT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          33611 3 +     47283 TTG
i Murina_feae.MurFea_scaffold_17764                      I 34 C 0
s Mustela_putorius.JH418006.1                             14343339 3 +  14710649 ttt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9788044 3 +  10118263 ttt
i Myotis_brandtii.KE162005.1                             I 34 C 0
s Myotis_davidii.KB100139.1                                4378455 3 +   6019432 ttt
i Myotis_davidii.KB100139.1                              I 34 C 0
s Myotis_lucifugus.GL429869.1                               378276 3 +   4330536 TTT
i Myotis_lucifugus.GL429869.1                            N 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1994 3 +      3929 ttt
i Myotis_myotis.MyoMyo_scaffold_185951                   I 34 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116022 3 +    130748 ctt
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 6152 C 0
s Nasalis_larvatus.k141_1350636                              24597 3 +     34575 TTT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464787 3 -  31847680 ttt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225837 3 -   7148211 ctt
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122883 3 -    149072 TTT
i Noctilio_leporinus.NocLep_scaffold_7894                I 31 C 0
s Nomascus_annamensis.k141_1771965                           49543 3 -    132029 TTT
i Nomascus_annamensis.k141_1771965                       I 9 C 0
s Nomascus_concolor.k141_735679                               5639 3 -     16345 TTT
i Nomascus_concolor.k141_735679                          I 9 C 0
s Nomascus_gabriellae.k141_57920                             11522 3 +     22201 TTT
i Nomascus_gabriellae.k141_57920                         I 9 C 0
s Nomascus_siki_b.tarseq_93                            8409859 3 -  22158432 TTT
i Nomascus_siki_b.tarseq_93                          I 9 C 0
s Nomascus_siki_a.k141_941534                                  21922 3 -     54323 TTT
i Nomascus_siki_a.k141_941534                              I 9 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194161 3 +   9404916 ttt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93631031 3 + 196305487 TTT
i Nycticebus_bengalensis.LG01                            C 0 I 4
s Nycticebus_coucang.k141_8166032                              420 3 +      2758 TTT
i Nycticebus_coucang.k141_8166032                        C 0 I 4
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559311 3 - 199412804 TTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 4
s Odobenus_rosmarus.KB229312.1                             1447552 3 +   2017862 ttt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434723 3 -    630418 ttt
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12714 3 +    150152 ttt
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8095107 3 +  10937097 ctt
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35223 3 +    559221 ttt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_85057                         22556 3 -     23432 TTT
i Otolemur_crassicaudatus.k141_85057                     C 0 I 4
s Otolemur_garnettii.GL873799.1                             347121 3 +   1103335 TTT
i Otolemur_garnettii.GL873799.1                          C 0 I 4
s Ovis_aries.CM001607.2                                   26402703 3 -  44047080 ttt
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3222 3 +     17875 TTT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467751 3 - 189151597 TTT
i Pan_troglodytes.CM009242.2                             I 78 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20439 3 -    230217 TTT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18457765 3 -  18783137 ttt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968493 3 +   8748460 ttt
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614146 3 +   2937107 ttt
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   239165 3 - 183742232 TTT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5632 3 +     21308 TTT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286669 3 -  20919399 TTT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18285 3 -     27687 TTT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11421 3 +     16796 TTT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18231 3 -     23640 TTT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11357 3 +     78924 ttt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21120 3 +     31479 TTT
i Perodicticus_ibeanus.k141_1921260                      C 0 I 4
s Perodicticus_potto.k141_1854441                            13491 3 -     24908 TTT
i Perodicticus_potto.k141_1854441                        C 0 I 4
s Phocoena_phocoena.PhoPho_flattened_line_46867              10965 3 -     15039 ctt
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            5051 3 +      7560 TTT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60758 3 -     63152 TTT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43357 3 +     45295 TTT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1036 3 +      5735 TTT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45882 3 +     46691 TTT
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        I 34 C 0
s Pithecia_albicans.k141_1239476                             61237 3 +    207309 TTG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2357 3 -     25401 TTG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28072 3 +     58159 TTG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28348 3 +     63561 TTG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28111 3 +     51148 TTG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553104 3 -   4542175 TTG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28095 3 +     51125 TTG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3049 3 -      8168 ctt
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4527 3 +     39866 TTG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39015 3 -     87950 TTG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39408 3 -     88961 TTG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4108 3 -     39403 TTG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39061 3 +     87928 TTG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4105 3 -     60166 TTG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11041 3 -     67232 TTG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38957 3 -     90634 TTG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40425 3 +     89403 TTG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173368 3 - 189387572 TTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188366 3 -   9816681 TTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23537 3 +     69807 TTT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40732 3 -     80239 TTT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8240 3 +     14086 ttc
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979737 3 +   4620579 TTT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562314 3 -   2598838 TTT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79401 3 -     79582 ttt
i Propithecus_coronatus.k141_149744                      I 71 C 0
s Propithecus_diadema.k141_153680                              556 3 -     11706 ttt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4291 3 -     30655 ttt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30616 3 +     46564 ttt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90907 3 -     98465 ttt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4529 3 +     35169 ttt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47754 3 -     66298 TTT
i Pteronotus_parnellii.KE847780.1                        I 31 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4434 3 -     10349 TCT
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 C 0
s Pteropus_alecto.KB030862.1                               5836672 3 -  28871421 ttt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533247 3 -   4952924 ttt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095317 3 +  38429054 ttt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51680 3 +     55069 TTT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909314 3 +   3329780 ttt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24755 3 +     27361 TTT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118114 3 + 195417433 TTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232363 3 -   7961872 TTT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70717 3 -    116970 ttt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                233 3 +     27962 TTT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              233 3 +      6077 TTT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              254 3 +      5971 TTT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                306 3 +      5932 TTT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               457 3 -      2099 TTT
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387492 3 - 209938924 TTT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 257 3 +      5979 TTT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                                632 3 -      4301 TTT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6289 3 +     16473 TTT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234723 3 +   5703754 TTT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4313 3 +     21866 TTT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112400 1 +    313613 --G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 11
s Semnopithecus_entellus.k141_158471                         21245 3 +     27374 TTT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24760 3 +     58920 TTT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11257 3 -     45317 TTT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18914 3 -     42441 TTT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21596 3 -     29113 TTT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24668 3 -     48123 TTT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854395 1 -   1910179 --C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855548 3 +   3870691 ttt
i Spermophilus_dauricus.KZ294078.1                       I 22 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              2288 3 -     97271 TTT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120980 3 +    196729 ttt
i Suricata_suricatta.SurSur_flattened_line_6629          I 8 C 0
s Sus_scrofa.CM000828.4                                    6639716 3 +  69701581 ctt
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386840 3 +   1523678 TTT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                 891 3 -      2009 ctt
i Tamandua_tetradactyla.TamTet_scaffold_445853           N 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187485 3 +    199430 TCT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101440 3 -    539355 TCT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                3195 3 +      6850 TTT
i Tarsius_lariang.k141_1780720                           I 10 C 0
s Tarsius_wallacei.k141_226975                                3280 3 +     20590 TTT
i Tarsius_wallacei.k141_226975                           I 10 C 0
s Theropithecus_gelada.CM009954.1                           349150 3 - 186847797 TTT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16284 3 -     31044 ctt
i Tolypeutes_matacus.TolMat_scaffold_31955               I 6392 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475563 3 -    610378 TTT
i Tonatia_saurophila.TonSau_scaffold_294                 I 32 C 0
s Trachypithecus_auratus.k141_1189070                        16809 3 +     26378 TTT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29490 3 -     78344 TTT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16130 3 +     25722 TTT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24353 3 -     62838 TTT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24472 3 +     46913 TTT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5280 3 -     28527 TTT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26292 3 -     64340 TTT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24329 3 -     63452 TTT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5771 3 +     22490 TTT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3391 3 +      4141 TTT
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6197 3 -     13050 TTT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251432 3 -   6242583 TTT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57166 3 +     59866 TTT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478893 3 -  10818551 ttc
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB338335.1                                  254 3 -       332 TTT
i Tupaia_chinensis.KB338335.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3411 3 -     70247 TTT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359846 3 -  33153633 ctt
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103625 1 -    105689 --A
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177508 3 +   5085361 ttt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  21367 3 -     30710 ttt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20275 3 -    147434 ttt
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74936 3 +   5488506 tgt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100907 3 -    112863 TTT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162450 3 -    224448 TTT
i Xerus_inauris.XerIna_scaffold_2302                     I 19 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24771 3 -     86975 TCT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2431392            342 3 +       382 ctt
i Ziphius_cavirostris.ZipCav_flattened_line_2431392      C 0 C 0
e Allochrocebus_solatus.k141_3554717                         14582 0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904 0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        514 1 +     36723 G
s Acinonyx_jubatus.LLWD01001279.1                           809065 1 +   1699592 a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410828 1 +  29979442 t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 116
s Ailurus_fulgens.LNAC01001112.1                            211747 1 +    347723 a
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 112
s Allenopithecus_nigroviridis.k141_3755588                   43825 1 +     53615 G
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39640 1 +     44087 G
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68559 1 -     84148 G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40782 1 -     78289 G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40230 1 +     55831 G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38671 1 -     64179 G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20314 1 -     24835 G
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37297 1 +     45454 G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42996 1 +     70886 G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5123 1 +     30854 G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29262 1 +     42133 G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583768 1 +   2318259 a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172535 1 -    412891 G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48867 1 -     68529 A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   47071 1 -     65372 G
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40819 1 +     43593 G
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668829 1 +   5030052 G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20471 1 -     23494 G
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5607 1 +      8415 G
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11781 1 -     32367 A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       15706 1 -     45910 A
i Arctocebus_calabarensis.k141_1364444                   I 4 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   375 1 -     15198 G
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271057 1 +  21539123 G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7228 1 +     48076 G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2362 1 -     28759 G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29914 1 +     44353 G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45289 1 -     71267 G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19345 1 -     33135 G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2452 1 +     11645 a
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2454 1 -     19611 a
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955600 1 -  23207421 a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2808 1 -      4711 a
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84765 1 +    124022 A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20296 1 +    288883 a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354683 1 +  48749331 a
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753251 1 +   1948126 a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543390 1 -  45695690 a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528412 1 -   4408762 C
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   4248 1 +     28062 G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39543 1 -     91139 G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17068 1 +     95584 G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16981 1 +    119600 G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              6164 1 -     13885 G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14850 1 +     17162 G
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449806 1 + 189096842 A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16099 1 -     18408 G
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629601 1 +  17673402 a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663887 1 +   7040546 a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207547 1 +   1652518 a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501277 1 +  60362399 a
i CanFam4.chr16                                          C 0 I 110
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     4907 1 -     23171 A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 110
s Canis_lupus_dingo.QKWQ01000480.1                          218268 1 +   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 110
s Canis_lupus_familiaris.chr16                            41611393 1 +  59632846 a
i Canis_lupus_familiaris.chr16                           C 0 I 110
s Canis_lupus_orion.HG994398.1                            45102963 1 -  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 I 110
s Capra_aegagrus.CM003241.1                               27407479 1 -  46296322 a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589752 1 +  44709034 a
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265586 1 +    496798 c
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                421 1 +      5315 G
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75255 1 -    217609 a
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1384 1 -     12580 G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39270 1 +     53515 G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367502 1 -  26074798 G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4391 1 -     34880 G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63486 1 -     89041 G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13866 1 -     50533 C
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488466 1 -  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15299 1 +     27315 a
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136985 1 -   4669795 C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40726 1 +     47900 A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40558 1 -     44860 A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40540 1 -    148725 A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23526 1 -     40656 G
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3534 1 +     20796 G
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7789 1 -     17524 G
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23481 1 -     34525 G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8201 1 -     25376 G
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360678 1 -  39242232 G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266506 1 +  21565898 G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27952 1 -     45857 G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23743 1 -     32606 G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27392 1 +     27662 G
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21442 1 +     70610 G
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18307 1 +     36323 G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9285 1 -     19938 a
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             26870 1 -     33796 a
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1065 1 -     15404 a
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5349 1 -     32913 G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15762 1 -     40346 G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16026 1 +    216457 G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15805 1 +     39636 G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            238 1 +      5346 G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38890 1 -    112038 G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4462 1 +     34062 G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339205 1 +  18827391 G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5814 1 -     44032 G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300531 1 - 135778131 G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405062 1 -   2368649 G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374252 1 - 200372422 G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4946 1 -      6605 G
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803357 1 +  53390261 A
i Condylura_cristata.JH655891.1                          I 11 I 8
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8789 1 +     10921 A
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               303 1 +     87169 a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2105491 1 -   2246927 A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288897 1 +  12879189 a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623928 1 -  35494412 a
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660753 1 -   1390856 c
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135545 1 -    198055 a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2130 1 +     19438 a
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238155 1 -    607251 g
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906286 1 +  41312741 a
i Enhydra_lutris.KZ291758.1                              C 0 I 126
s Eptesicus_fuscus.JH977646.1                             12573691 1 +  14770903 a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037722 1 -   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371656 1 +  39960074 a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408442 1 -    498745 a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258761 1 +  21539334 G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63479 1 -    133382 a
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3695 1 +      7672 a
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11857 1 -     24895 a
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39569 1 -     70999 a
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83529 1 +    112731 a
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40101 1 +     68309 a
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50426 1 -     65740 a
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21056 1 -     75513 a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45249 1 -     97555 a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1974 1 +     30972 a
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39699 1 -     52037 a
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56100 1 -    111500 a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242724 1 - 206538554 a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112506 1 - 205367284 a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23854 1 -     30238 A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     119287 1 -    137831 A
i Galago_moholi.ctg3793                                  I 4 C 0
s Galago_senegalensis.k141_991736                             2827 1 +     22493 A
i Galago_senegalensis.k141_991736                        I 4 C 0
s Galagoides_demidoff.k141_561628                            15020 1 -     32986 A
i Galagoides_demidoff.k141_561628                        I 4 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15071 1 +     18121 a
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89833 1 -     95226 a
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Gorilla_beringei.k141_3358147                                865 1 -      8343 G
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250365 1 - 186649187 G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11790 1 -     40692 a
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33192 1 +     49394 a
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58060 1 -     66874 a
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6937 1 -     42923 a
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13933 1 -     53142 a
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26619 1 -    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7586 1 +     48891 A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11073 1 +     12639 T
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6185 1 -     36432 a
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546022 1 -   1711038 A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45330 1 +     49977 A
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138261 1 -    630532 G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65298 1 +     83186 A
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 230 C 0
s Hylobates_agilis.k141_1155965                               1294 1 +     12352 G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8477 1 +     55766 G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047816 1 + 191637585 G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797148 1 +  11177569 G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375174 1 +   7955117 a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_1634743                                     208 1 -      1784 a
i Indri_indri.k141_1634743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1715 1 -     16823 A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64204 1 -     97402 A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39604 1 +    110728 G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59200 1 -     65777 A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756582 1 +  30322482 a
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         309 1 -     13097 G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            260 1 +      5940 G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6513 1 -     11567 G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7894 1 -     12945 G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5231 1 +     29618 a
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5230 1 +     31569 a
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5236 1 +     24756 a
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5235 1 +     16388 a
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809378 1 -   3914936 g
i Leptonychotes_weddellii.KB714746.1                     C 0 I 123
s Lipotes_vexillifer.KE559953.1                             333238 1 +    662738 A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328941 1 -   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2265 1 +     19643 A
i Loris_lydekkerianus.k141_2031736                       I 4 C 0
s Loris_tardigradus.ctg83                                  5035923 1 -   6120653 A
i Loris_tardigradus.ctg83                                I 4 C 0
s Loxodonta_africana.GL010049.1                           39076239 1 +  43346337 A
i Loxodonta_africana.GL010049.1                          C 0 I 7
s Lycaon_pictus.CM007581.1                                41610548 1 +  59628241 a
i Lycaon_pictus.CM007581.1                               C 0 I 110
s Macaca_arctoides.k141_1757516                              41221 1 -     61512 A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368849 1 -  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21169 1 +     30207 A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18272 1 -     24934 A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21056 1 +     30527 A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32245 1 -     50087 A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41983 1 +     51645 a
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410557 1 - 187317192 A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395440 1 +  25927173 A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44572 1 -     62418 A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21259 1 +     24253 A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41016 1 +     59329 A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266848 1 +    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18194 1 +     21031 A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31926 1 +     33478 A
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219202 1 -    270270 A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318324 1 +  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353156 1 -    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669935 1 -    737560 G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217229 1 +    317179 G
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7489267 1 +  40650429 a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146272 1 +    207569 A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14298 1 -     74585 A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 128
s Mesoplodon_bidens.MesBid_scaffold_6114                     79782 1 +     93471 a
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 6272 1 +     17804 G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7045 1 -     12984 G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15007 1 -     26561 G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980833 1 +  93316391 A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180510 1 +    200668 G
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         18235 1 -     27822 G
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4394 1 +     27589 G
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 117
s Mirza_zaza.k141_766280                                     48694 1 -     62432 a
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351671 1 +    437263 a
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174680 1 +    366855 G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22738 1 -     82753 A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14388 1 -     63510 A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          33614 1 +     47283 A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343342 1 +  14710649 a
i Mustela_putorius.JH418006.1                            C 0 I 125
s Myotis_brandtii.KE162005.1                               9788047 1 +  10118263 a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378458 1 +   6019432 a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               378279 1 +   4330536 A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1997 1 +      3929 c
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116025 1 +    130748 a
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              24600 1 +     34575 G
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464790 1 -  31847680 g
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 108
s Neophocaena_asiaeorientalis.KZ687982.1                   1225840 1 -   7148211 a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122886 1 -    149072 G
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49546 1 -    132029 G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5642 1 -     16345 G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11525 1 +     22201 G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409862 1 -  22158432 G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21925 1 -     54323 G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194164 1 +   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 109
s Nycticebus_bengalensis.LG01                             93631038 1 + 196305487 A
i Nycticebus_bengalensis.LG01                            I 4 C 0
s Nycticebus_coucang.k141_8166032                              427 1 +      2758 A
i Nycticebus_coucang.k141_8166032                        I 4 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559318 1 - 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 4 C 0
s Odobenus_rosmarus.KB229312.1                             1447555 1 +   2017862 a
i Odobenus_rosmarus.KB229312.1                           C 0 I 129
s Odocoileus_virginianus.KZ100018.1                         434726 1 -    630418 a
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12717 1 +    150152 a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8095110 1 +  10937097 a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35226 1 +    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 110
s Otolemur_crassicaudatus.k141_85057                         22563 1 -     23432 A
i Otolemur_crassicaudatus.k141_85057                     I 4 C 0
s Otolemur_garnettii.GL873799.1                             347128 1 +   1103335 A
i Otolemur_garnettii.GL873799.1                          I 4 C 0
s Ovis_aries.CM001607.2                                   26402706 1 -  44047080 a
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3225 1 +     17875 A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467754 1 - 189151597 G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20442 1 -    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18457768 1 -  18783137 a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968496 1 +   8748460 a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614149 1 +   2937107 a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   239168 1 - 183742232 A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5635 1 +     21308 A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286672 1 -  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18288 1 -     27687 A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11424 1 +     16796 A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18234 1 -     23640 A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11360 1 +     78924 a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21127 1 +     31479 A
i Perodicticus_ibeanus.k141_1921260                      I 4 C 0
s Perodicticus_potto.k141_1854441                            13498 1 -     24908 A
i Perodicticus_potto.k141_1854441                        I 4 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10968 1 -     15039 a
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            5054 1 +      7560 G
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60761 1 -     63152 G
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43360 1 +     45295 G
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1039 1 +      5735 G
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45885 1 +     46691 A
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61240 1 +    207309 G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2360 1 -     25401 G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28075 1 +     58159 G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28351 1 +     63561 G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28114 1 +     51148 G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553107 1 -   4542175 G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28098 1 +     51125 G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3052 1 -      8168 a
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4530 1 +     39866 G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39018 1 -     87950 G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39411 1 -     88961 G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4111 1 -     39403 G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39064 1 +     87928 G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4108 1 -     60166 G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11044 1 -     67232 G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38960 1 -     90634 G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40428 1 +     89403 G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173371 1 - 189387572 G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188369 1 -   9816681 G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23540 1 +     69807 G
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40735 1 -     80239 G
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8243 1 +     14086 t
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979740 1 +   4620579 A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562317 1 -   2598838 A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79404 1 -     79582 a
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              559 1 -     11706 a
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4294 1 -     30655 a
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30619 1 +     46564 a
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90910 1 -     98465 a
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4532 1 +     35169 a
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47757 1 -     66298 G
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4437 1 -     10349 A
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 I 134
s Pteropus_alecto.KB030862.1                               5836675 1 -  28871421 a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533250 1 -   4952924 a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095320 1 +  38429054 a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51683 1 +     55069 A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909317 1 +   3329780 a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24758 1 +     27361 G
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118117 1 + 195417433 G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232366 1 -   7961872 G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70720 1 -    116970 a
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                236 1 +     27962 G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              236 1 +      6077 G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              257 1 +      5971 G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                309 1 +      5932 G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               460 1 -      2099 G
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387495 1 - 209938924 G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 260 1 +      5979 G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                                635 1 -      4301 G
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6292 1 +     16473 A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234726 1 +   5703754 G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4316 1 +     21866 G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112412 1 +    313613 A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 11 I 8
s Semnopithecus_entellus.k141_158471                         21248 1 +     27374 G
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24763 1 +     58920 G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11260 1 -     45317 G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18917 1 -     42441 G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21599 1 -     29113 G
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24671 1 -     48123 G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854396 1 -   1910179 A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855551 1 +   3870691 a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              2291 1 -     97271 G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 706
s Suricata_suricatta.SurSur_flattened_line_6629             120983 1 +    196729 a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6639719 1 +  69701581 A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386843 1 +   1523678 G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                 894 1 -      2009 a
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187488 1 +    199430 A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101443 1 -    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                3198 1 +      6850 C
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3283 1 +     20590 C
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349153 1 - 186847797 A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16287 1 -     31044 a
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475566 1 -    610378 G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16812 1 +     26378 G
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29493 1 -     78344 G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16133 1 +     25722 G
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24356 1 -     62838 G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24475 1 +     46913 G
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5283 1 -     28527 G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26295 1 -     64340 G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24332 1 -     63452 G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5774 1 +     22490 G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3394 1 +      4141 G
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6200 1 -     13050 G
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251435 1 -   6242583 G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57169 1 +     59866 G
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478896 1 -  10818551 a
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB338335.1                                  257 1 -       332 A
i Tupaia_chinensis.KB338335.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3414 1 -     70247 A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359849 1 -  33153633 a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103626 1 -    105689 A
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 7
s Ursus_maritimus.KK499267.1                                177511 1 +   5085361 a
i Ursus_maritimus.KK499267.1                             C 0 I 110
s Varecia_rubra.k141_787544                                  21370 1 -     30710 a
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20278 1 -    147434 a
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74939 1 +   5488506 a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                100910 1 -    112863 A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 110
s Xerus_inauris.XerIna_scaffold_2302                        162453 1 -    224448 A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 5
s Zalophus_californianus.ZalCal_flattened_line_17732         24774 1 -     86975 A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 130
s Ziphius_cavirostris.ZipCav_flattened_line_2431392            345 1 +       382 a
i Ziphius_cavirostris.ZipCav_flattened_line_2431392      C 0 C 0
e Allochrocebus_solatus.k141_3554717                         14582 0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904 0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        515 20 +     36723 AATGA----TCCAC-TTT---------GAGT-CCT
s Acinonyx_jubatus.LLWD01001279.1                           809066 20 +   1699592 aatga----catttaaat---------gacT-CC-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410945 17 +  29979442 AGtga----ctta----t---------cact-tta
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 116 C 0
s Ailurus_fulgens.LNAC01001112.1                            211860 17 +    347723 agtga----ctta----t---------cact-tta
i Ailurus_fulgens.LNAC01001112.1                         I 112 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43826 20 +     53615 AATGA----TCCAC-TTT---------GAGT-CCT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39641 20 +     44087 AATGA----TCCAC-TTT---------GAGT-CCT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68560 20 -     84148 AATGA----TCCAC-TTT---------GAGT-CCT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40783 20 -     78289 AATGA----TCCAC-TTT---------GAGT-CCT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40231 20 +     55831 AATGA----TCCAC-TTT---------GAGT-CCT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38672 20 -     64179 AATGA----TCCAC-TTT---------GAGT-CCT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20315 20 -     24835 AATGA----TCCAC-TTT---------GAGT-CCT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37298 20 +     45454 AATGA----TCCAC-TTT---------GAGT-CCT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              42997 20 +     70886 AATGA----TCCAC-TTT---------GAGT-CCT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5124 20 +     30854 AATGA----TCCAC-TTT---------GAGT-CCT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29263 20 +     42133 AATGA----TCCAC-TTT---------GAGT-CCT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583769 20 +   2318259 cATGA----TATAC-CCT---------GGCT-TCC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172536 20 -    412891 AATGA----TACAG-TTT---------GACT-ACC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48868 20 -     68529 AATGA----TATAC-CCT---------GGCT-CCC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   47072 20 -     65372 AATGG----TCCAC-TTT---------GAGG-CCT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40820 20 +     43593 AATGA----TCCAC-TTT---------GAGG-CCT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668830 20 +   5030052 AATGA----TCCAC-TTT---------GAGG-CCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20472 20 -     23494 AATGA----TCCAC-TTT---------GAGG-CCT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5608 20 +      8415 AATGA----TCCAC-TTT---------GAGG-CCT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11782 20 -     32367 AATGA----TGTAC-TCC---------GACT-TCT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       15707 19 -     45910 AATGA----TGT-G-TTT---------GACT-CCT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   376 20 -     15198 AATGA----TACAG-TTT---------GACT-ACA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271058 20 +  21539123 AATGA----TCCAC-TTT---------GAGT-CCT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7229 20 +     48076 AATGA----TCCAC-TTT---------GAGT-CCT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2363 20 -     28759 AATGA----TCCAC-TTT---------GAGT-CCT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29915 20 +     44353 AATGA----TCCAC-TTT---------GAGT-CCT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45290 20 -     71267 AATGA----TCCAC-TTT---------GAGT-CCT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19346 20 -     33135 AATGA----TCCAC-TTT---------GAGT-CCT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2453 20 +     11645 aatga----tgtaa-ttt---------gact-cat
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2455 20 -     19611 aatga----tgtaa-ttt---------gact-cat
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955601 20 -  23207421 aatga----tacac-ttt---------ggct-ccc
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2809 20 -      4711 aatga----tacac-ttt---------ggct-ccc
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84766 20 +    124022 AATGA----TATAC-CCT---------GGCT-TCC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20297 20 +    288883 aatgA----TATAC-CCT---------GGCT-TCC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354684 20 +  48749331 aatgA----TATAC-CCT---------GGCT-TCC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753252 20 +   1948126 aatgA----TATAC-CCT---------GGCT-TCC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543391 20 -  45695690 aatgA----TATAC-CCT---------GGCT-TCC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528413 20 -   4408762 AATGA----TATTC-CCT---------GGCT-TCC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   4249 20 +     28062 AATGA----CCCGC-TTT---------GAGT-CCT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39544 20 -     91139 AATGA----CCCGC-TTT---------GAGT-CCT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17069 20 +     95584 AATGA----CCCGC-TTT---------GAGT-CCT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         16982 20 +    119600 AATGA----CCTGC-TTT---------GAGT-CCT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6489 20 +     18648 AATGA----TCCGC-TTT---------GAGT-TCT
i Callibella_humilis.k141_1233062                        N 0 C 0
s Callimico_goeldii.k141_1609886                              6165 20 -     13885 AATGA----TCCAC-TTT---------GAGT-CCT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14851 20 +     17162 AATGA----TCCAC-TTT---------GAGT-TCT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449807 20 + 189096842 AATGA----TCCAC-TTT---------GAGT-TCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16100 20 -     18408 AATGA----TCCAC-TTT---------GAGT-TCT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629602 20 +  17673402 aatga----catgc-ttt---------ggct-ccc
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663888 20 +   7040546 aatga----catgc-ttt---------ggct-ccc
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207548 20 +   1652518 aatga----catgc-ttt---------ggct-ccc
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501388 17 +  60362399 agtga----ttta----t---------cact-tTA
i CanFam4.chr16                                          I 110 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5018 17 -     23171 agtga----ttta----t---------cact-tta
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 110 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218379 17 +   9314153 agtga----ttta----t---------cact-tta
i Canis_lupus_dingo.QKWQ01000480.1                       I 110 C 0
s Canis_lupus_familiaris.chr16                            41611504 17 +  59632846 agtga----ttta----t---------cact-tta
i Canis_lupus_familiaris.chr16                           I 110 C 0
s Canis_lupus_orion.HG994398.1                            45103074 17 -  63665305 agtga----ttta----t---------cact-tta
i Canis_lupus_orion.HG994398.1                           I 110 C 0
s Capra_aegagrus.CM003241.1                               27407480 20 -  46296322 cATGA----TATAC-CCT---------GGCT-TCC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589753 20 +  44709034 cATGA----TATAC-CCT---------GGCT-TCC
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265587 33 +    496798 tattatttatttac-ttttttagagatgagg-cct
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                422 20 +      5315 AGTGA----TACAG-TTT---------GACT-ACC
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75256 20 -    217609 aatga----tctat-ttt---------ggct-ccc
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1385 20 -     12580 AATGA----TCCAC-TTT---------GAGT-TCT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39271 20 +     53515 AATGA----TCCAC-TTT---------GAGT-TCT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367503 20 -  26074798 AATGC----TCCAC-TTT---------GAGT-CCT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4392 20 -     34880 AATGC----TCCAC-TTT---------GAGT-CCT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63487 20 -     89041 AATGC----TCCAC-TTT---------GAGT-CCT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13867 33 -     50533 TATTAtttatttac-ttttctagagatgagg-cgt
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488467 20 -  27778364 catga----tagac-ttt---------gact-ccc
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15300 20 +     27315 catga----tagac-ttt---------gact-ccc
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                136986 20 -   4669795 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40727 20 +     47900 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40559 20 -     44860 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40541 20 -    148725 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23527 20 -     40656 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercopithecus_ascanius.k141_3120866                    C 0 I 71
s Cercopithecus_cephus.k141_4183004                           3535 20 +     20796 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7790 20 -     17524 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23482 20 -     34525 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8202 20 -     25376 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360679 20 -  39242232 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266507 20 +  21565898 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27953 20 -     45857 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23744 20 -     32606 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27393 20 +     27662 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercopithecus_petaurista.k141_1716667                  C 0 I 79
s Cercopithecus_pogonias.k141_6079                           21443 20 +     70610 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18308 20 +     36323 AATGA----TCCAC-TTT---------GAGT-CCT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9286 20 -     19938 aaTGA----TAAAC-TTT---------GACT-CTT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             26871 20 -     33796 aatga----tataa-ttt---------gacc-ctt
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1066 20 -     15404 aatga----tgtaa-ttt---------gacc-cct
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5350 20 -     32913 GATGA----TCCAC-TTT---------GAGT-CCT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15763 20 -     40346 GATGA----TCCAC-TTT---------GAGT-CCT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16027 20 +    216457 GATGA----TCCAC-TTT---------GAGT-CCT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15806 20 +     39636 GATGA----TCCAC-TTT---------GAGT-CCT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            239 20 +      5346 AATGA----TCCCC-TTT---------GAGT-CCT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38891 20 -    112038 AATGA----CCCGC-TTT---------GAGT-CCT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4463 20 +     34062 AATGA----CCCGC-TTT---------GAGT-CCT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339206 20 +  18827391 AATGA----TCCAC-TTT---------GAGT-CCT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5815 20 -     44032 AATGA----TCCAC-TTT---------GAGT-CCT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300532 20 - 135778131 AATGA----TCCAC-TTT---------GAGT-CCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405063 20 -   2368649 AATGA----TCCAC-TTT---------GAGT-CCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374253 15 - 200372422 AATGA----TCCAC-TTT---------GA------
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4947 20 -      6605 AATGA----TCCAC-TTT---------GAGT-CCT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803366 15 +  53390261 AATGA----GGTAC-GTT---------GG------
i Condylura_cristata.JH655891.1                          I 8 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8790 20 +     10921 AATGG----TATAT-TTT---------GACT-ACT
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               304 19 +     87169 aatga----tagac-ttt---------gac-tcc-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Dasypus_novemcinctus.JH564415.1                          2105492 20 -   2246927 AATGA----TAAAC-TTT---------GACT-CTT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288898 20 +  12879189 aatga----tataa-ttt---------gact-cct
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623929 20 -  35494412 aatga----tacac-ttt---------ggct-ccc
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660754 20 -   1390856 catga----tagac-ttt---------gact-ccc
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135546 20 -    198055 catga----tagac-ttt---------gact-ccc
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2131 20 +     19438 aatgg----CATGT-TTT---------GACT-ACC
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238156 20 -    607251 aaTGA----TATGC-CCT---------GGCT-CCC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906413 17 +  41312741 agtga----ctta----t---------cact-tta
i Enhydra_lutris.KZ291758.1                              I 126 C 0
s Eptesicus_fuscus.JH977646.1                             12573692 20 +  14770903 aatgt----tatat-ttt---------gacc-acc
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037723 20 -   4378816 aatga----tagac-ttt---------gact-ccc
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371657 20 +  39960074 aatga----tagac-ttt---------gact-ccc
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408443 20 -    498745 aatga----tagac-ttt---------gact-ccc
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258762 20 +  21539334 AATGA----TCCAC-TTT---------GAGT-CCT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63480 20 -    133382 aatga----tacac-ttt---------ggct-ccc
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3696 20 +      7672 aatga----tgcac-ttt---------ggct-ccc
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11858 20 -     24895 aatga----tataa-ttt---------gacc-cct
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39570 20 -     70999 aatga----tataa-ttt---------gacc-cct
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83530 20 +    112731 aatga----tataa-ttt---------gacc-cct
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40102 20 +     68309 aatga----tataa-ttt---------gacc-cct
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50427 20 -     65740 aatga----tgtaa-ttt---------gacc-cct
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21057 20 -     75513 aatga----tataa-ttt---------gacc-cct
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45250 20 -     97555 aatga----tataa-ttt---------gacc-cct
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1975 20 +     30972 aatga----tgtaa-ttt---------gacc-tct
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39700 20 -     52037 aatga----tataa-ttt---------gacc-cct
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56101 20 -    111500 aatga----tataa-ttt---------gacc-cct
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242725 20 - 206538554 aatga----catttaagt---------GACT-TC-
i Felis_catus.CM001381.2                                 C 0 I 2
s Felis_catus_fca126.CM031415.1                          185112507 20 - 205367284 aatga----catttaaat---------gacT-TC-
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_31944                 23855 20 -     30238 AATGA----CATTTAAAT---------GACT-TC-
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 2
s Galago_moholi.ctg3793                                     119288 19 -    137831 AATGA----TGT-G-TTT---------GACT-CCT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             2828 19 +     22493 AATGA----TGT-G-TTT---------GACT-CCT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            15021 19 -     32986 AATGA----TGT-G-TCT---------GACT-CCT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15072 20 +     18121 aatga----tatac-ttt---------gact-cct
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89834 20 -     95226 aaTGA----TATAC-CCT---------GGCT-CCC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Gorilla_beringei.k141_3358147                                866 20 -      8343 AATGA----TCCAC-TTT---------GAGT-CCT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250366 20 - 186649187 AATGA----TCCAC-TTT---------GAGT-CCT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11791 20 -     40692 aatga----tgtaa-ttt---------gact-cct
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33193 20 +     49394 aatga----tgtaa-ttt---------gact-cct
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58061 20 -     66874 aatga----tgtaa-ttt---------gact-cct
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6938 20 -     42923 aatga----tgtaa-ttt---------gact-cct
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13934 20 -     53142 aatga----tgtaa-ttt---------gact-cct
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26620 19 -    327341 AGTGA----TACAC-TTT---------GAC-TCC-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7587 20 +     48891 AATGA----TATAC-CCT---------GGCT-TCC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11074 20 +     12639 GATGA----TATGC-TTT---------GACT-CCT
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6186 20 -     36432 aatga----tatac-ttt---------ggct-ccc
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546023 18 -   1711038 AATAG----TA-AT--TT---------GACT-ACC
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45331 19 +     49977 AATAG----TA-AT-TTT---------GACT-ACC
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138262 20 -    630532 AATGA----TCCAC-TTT---------GAGT-CCT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65299 19 +     83186 AATGA----TATAC-TTT---------GGCA-CC-
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 2
s Hylobates_agilis.k141_1155965                               1295 20 +     12352 AATGA----TCCAC-TTT---------GAGT-CCT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8478 20 +     55766 AATGA----TCCAC-TTT---------GAGT-CCT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047817 20 + 191637585 AATGA----TCCAC-TTT---------GAGT-CCT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797149 20 +  11177569 AATGA----TCCAC-TTT---------GAGT-CCT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375175  5 +   7955117 aatga------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 5
s Indri_indri.k141_1634743                                     209 20 -      1784 aatga----tataa-ttt---------gacc-cat
i Indri_indri.k141_1634743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1716 20 -     16823 AGTGA----TAAAC-TTT---------GGCT-CCC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64205 20 -     97402 AATGA----TACAC-TTT---------GGCT-CCC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39605 20 +    110728 AATGA----TCCAC-TTT---------GAGT-CCT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59201 20 -     65777 AATGT----TATAT-TTT---------GAAC-ACC
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756583 20 +  30322482 aatga----tgtaa-ttt---------gact-cct
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         310 20 -     13097 AATGA----TCCCC-TTT---------GAGT-CCT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            261 20 +      5940 AATGA----TCCCC-TTT---------GAGT-CCT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6514 20 -     11567 AATGA----TCCAC-TTT---------GAGT-CCT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7895 20 -     12945 AATGA----TCCAC-TTT---------GAGT-CCT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5232 20 +     29618 aatga----tgata-ttt---------gacc-cct
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5231 20 +     31569 aatga----tgata-ttt---------gacc-cct
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5237 20 +     24756 aatga----tgata-ttt---------gacc-act
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5236 20 +     16388 aatga----tgata-ttt---------gacc-cct
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809502  8 -   3914936 agtga----ctt-----------------------
i Leptonychotes_weddellii.KB714746.1                     I 123 I 9
s Lipotes_vexillifer.KE559953.1                             333239 20 +    662738 AATCA----TACAC-TTT---------GGCT-CCC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328942 20 -   1826925 AATGA----TCCAC-TTT---------GAGT-CCT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2266 19 +     19643 AATGT----TGT-G-TTT---------GACT-CCT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5035924 19 -   6120653 AATGT----CGT-G-TTT---------GACT-CCT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39076247  7 +  43346337 ---------------------------GACT-CCT
i Loxodonta_africana.GL010049.1                          I 7 C 0
s Lycaon_pictus.CM007581.1                                41610659 17 +  59628241 agtga----ttTG----T---------TAct-tta
i Lycaon_pictus.CM007581.1                               I 110 C 0
s Macaca_arctoides.k141_1757516                              41222 20 -     61512 AATGA----TCCAC-TTT---------GAGT-CCT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368850 20 -  60120075 AATGA----TCCAC-TTT---------GAGT-CCT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21170 20 +     30207 AATGA----TCCAC-TTT---------GAGT-CCT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18273 20 -     24934 AATGA----TCCAC-TTT---------GAGT-CCT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21057 20 +     30527 AATGA----TCCAC-TTT---------GAGT-CCT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32246 20 -     50087 AATGA----TCCAC-TTT---------GAGT-CCT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  41984 20 +     51645 aatga----tccac-ttt---------gagt-cct
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410558 20 - 187317192 AATGA----TCCAC-TTT---------GAGT-CCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395441 20 +  25927173 AATGA----TCCAC-TTT---------GAGT-CCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44573 20 -     62418 AATGA----TCCAC-TTT---------GAGT-CCT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21260 20 +     24253 AATGA----TCCAC-TTT---------GAGT-CCT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41017 20 +     59329 AATGA----TCCAC-TTT---------GAGT-CCT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266849 20 +    668171 AATGA----TCCAC-TTT---------GAGT-CCT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18195 20 +     21031 AATGA----TCCAC-TTT---------GAGT-CCT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31927 20 +     33478 AATGA----TCCAC-TTT---------GAGT-CCT
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219203 20 -    270270 AATGT----CATGT-TTT---------GACT-ACC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318325 20 +  24302211 AATGA----TCCAC-TTT---------GAGT-CCT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353157 20 -    752769 AATGA----TCCAC-TTT---------GAGT-CCT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669936 20 -    737560 AGTGA----TCTAC-TTT---------GACT-CCC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217230 20 +    317179 AGTGA----TCTAC-TTT---------GACT-CCC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7489268  5 +  40650429 aatga------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 5
s Megaderma_lyra.MegLyr_scaffold_4542                       146273 17 +    207569 AATGG----TGCAT-TTT---------GACT----
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14427 17 -     74585 agtga----ctta----t---------cact-tTA
i Mellivora_capensis.MelCap_flattened_line_19308         I 128 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79783 20 +     93471 aatga----tacac-ttt---------ggct-ccc
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 6273 20 +     17804 AATGA----TCCGC-TTT---------GAGT-TCT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7046 20 -     12984 AATGA----TCCGC-TTT---------GAGT-TCT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15008 20 -     26561 AATGA----TCCGC-TTT---------GAGT-TCT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980834 20 +  93316391 AATGA----TGTTA-TTT---------GGCC-CCT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180511 20 +    200668 AATGA----TACCG-TTT---------GAGT-ACC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         18236 20 -     27822 AATGA----TCCAC-TTT---------GAGT-CCT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4512  8 +     27589 agtga----ctt-----------------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 117 I 9
s Mirza_zaza.k141_766280                                     48695 20 -     62432 aatga----tgtaa-ttt---------ggcc-cct
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351672 20 +    437263 aatga----tacac-ttt---------ggct-ccc
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174681 20 +    366855 GATGA----TATAT-TTG---------GACT-ACC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22739 20 -     82753 AATGA----TATAC-CCT---------GGCT-CCC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14389 19 -     63510 AGTGA----TATAC-TTT---------GGC-TCC-
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 2
s Murina_feae.MurFea_scaffold_17764                          33615 20 +     47283 AATGT----TATAT-TTT---------GGCC-ACC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343468 17 +  14710649 agtgg----ctta----t---------cact-tta
i Mustela_putorius.JH418006.1                            I 125 C 0
s Myotis_brandtii.KE162005.1                               9788048 20 +  10118263 aatgt----tagat-ttt---------gacc-acc
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378459 20 +   6019432 aatgt----tatat-ttt---------gacc-acc
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               378280 19 +   4330536 AATGT----TATAT--AT---------GACC-ACC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        1998 20 +      3929 aatgt----tatat-ttt---------gacc-acc
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116026 20 +    130748 aatGA----TATAC-TTG---------TACC-CTT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              24601 20 +     34575 AATGA----TCCAC-TTT---------GAGT-CCT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464899  8 -  31847680 agtga----ctt-----------------------
i Neomonachus_schauinslandi.NINY01007730.1               I 108 I 9
s Neophocaena_asiaeorientalis.KZ687982.1                   1225841 20 -   7148211 aatga----tacac-ttt---------ggct-ccc
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122887 20 -    149072 CATGA----TATCT-TTT---------AACT-ACT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49547 20 -    132029 AATGA----TCCAC-TTT---------GAGT-CCT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5643 20 -     16345 AATGA----TCCAC-TTT---------GAGT-CCT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11526 20 +     22201 AATGA----TCCAC-TTT---------GAGT-CCT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409863 20 -  22158432 AATGA----TCCAC-TTT---------GAGT-CCT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21926 20 -     54323 AATGA----TCCAC-TTT---------GAGT-CCT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194274 17 +   9404916 agtga----tttg----t---------cact-tta
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 109 C 0
s Nycticebus_bengalensis.LG01                             93631039 19 + 196305487 AATGT----TGT-C-TTT---------GACT-CTT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              428 19 +      2758 AATGT----TGT-C-TTT---------GACT-CTT
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559319 19 - 199412804 AATGT----TGT-C-TTT---------GACT-CTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447685  8 +   2017862 agtga----ctt-----------------------
i Odobenus_rosmarus.KB229312.1                           I 129 I 6
s Odocoileus_virginianus.KZ100018.1                         434727 20 -    630418 aatgA----TATGC-CCT---------GGCT-TCC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12718 20 +    150152 aatGA----TATAC-CCT---------GGCT-CCC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8095111 20 +  10937097 aatga----tacac-ttt---------ggct-ccc
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35337 17 +    559221 agtga----ttta----t---------cact-tta
i Otocyon_megalotis.JAEUCK010005147.1                    I 110 C 0
s Otolemur_crassicaudatus.k141_85057                         22564 19 -     23432 AATGA----TGT-C-TTT---------GACA-TCT
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347129 19 +   1103335 AATGA----TGT-C-TTT---------GACT-TCT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402707 20 -  44047080 aaTGA----TATAC-CCT---------GGCT-TCC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3226 20 +     17875 AATGA----TATAC-CCT---------GGCT-TCC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467755 20 - 189151597 AATGA----TCCAC-TTT---------GAGT-CCT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20443 20 -    230217 AATGA----CATTTAAAT---------GACT-CC-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                              18457769 20 -  18783137 aatga----catttaaat---------gaCT-CC-
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               3968497 20 +   8748460 aatga----catttaaat---------gacT-CC-
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1614150 20 +   2937107 cATGA----TATAC-TCT---------GGCT-TCC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   239169 20 - 183742232 AATGA----TCCAC-TTT---------GAGT-CCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5636 20 +     21308 AATGA----TCCAC-TTT---------GAGT-CCT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286673 20 -  20919399 AATGA----TCCAC-TTT---------GAGT-CCT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18289 20 -     27687 AATGA----TCCAC-TTT---------GAGT-CCT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11425 20 +     16796 AATGA----TCCAC-TTT---------GAGT-CCT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18235 20 -     23640 AATGA----TCCAC-TTT---------GAGT-CCT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11361 19 +     78924 aatga----tatac-ttt---------gact-cc-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 2
s Perodicticus_ibeanus.k141_1921260                          21128 19 +     31479 AATGA----TGT-G-TTT---------GACT-CCT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13499 19 -     24908 AATGA----TGT-G-TTT---------GACT-CCT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10969 20 -     15039 aatga----tacac-ttt---------ggct-ccc
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            5055 20 +      7560 AATGA----TCCAC-TTT---------GAGT-CCT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60762 20 -     63152 AATGA----TCCAC-TTT---------GAGT-CCT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43361 20 +     45295 AATGA----TCCAC-TTT---------GAGT-CCT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1040 20 +      5735 AATGA----TCCAC-TTT---------GAGT-CCT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45886 20 +     46691 AATAT----TATAT-TTT---------GACC-ACT
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61241 20 +    207309 AATGA----TCCAC-TTT---------GAGT-CCT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2361 20 -     25401 AATGA----TCCAC-TTT---------GAGT-CCT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28076 20 +     58159 AATGA----TCCAC-TTT---------GAGT-CCT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28352 20 +     63561 AATGA----TCCAC-TTT---------GAGT-CCT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28115 20 +     51148 AATGA----TCCAC-TTT---------GAGT-CCT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553108 20 -   4542175 AATGA----TCCAC-TTT---------GAGT-CCT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28099 20 +     51125 AATGA----TCCAC-TTT---------GAGT-CCT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3053 20 -      8168 aatga----tacac-ttt---------ggct-ccc
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4531 16 +     39866 -ATGA----TCCA----T---------GAGT-CCT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39019 16 -     87950 -ATGA----TCCA----T---------GAGT-CCT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39412 16 -     88961 -ATGG----TCCA----T---------GAGT-CCT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4112 16 -     39403 -ATGA----TCCA----T---------GAGT-CCT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39065 16 +     87928 -ATGA----TCCA----T---------GAGT-CCT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4109 16 -     60166 -ATGA----TCCA----T---------GAGT-CCT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11045 16 -     67232 -ATGA----TCCA----T---------GAGT-CCT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38961 16 -     90634 -ATGA----TCCA----T---------GAGT-CCT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40429 16 +     89403 -ATGA----TCCA----T---------GAGT-CCT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173372 20 - 189387572 CATGA----TCCAC-TTT---------GAGT-CCT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188370 20 -   9816681 CATGA----TCCAC-TTT---------GAGT-CCT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23541 20 +     69807 AATGA----TCCAC-TTT---------GAGT-CCT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40736 20 -     80239 AATGA----TCCAC-TTT---------GAGT-CCT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8244 20 +     14086 gatga----tatgc-ttt---------gact-cct
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979741 20 +   4620579 AATGA----TGTAA-TTT---------GACT-CCT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562318 20 -   2598838 AATGA----TGTAA-TTT---------GACT-CAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79405 20 -     79582 aatga----tgtaa-ttt---------gact-cat
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              560 20 -     11706 aatga----tgtaa-ttt---------gact-cat
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4295 20 -     30655 aatga----tgtaa-ttt---------gact-cat
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30620 20 +     46564 aatga----tgtaa-ttt---------gact-cat
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90911 20 -     98465 aatga----tgtaa-ttt---------gact-cgt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4533 20 +     35169 aatga----tgtaa-ttt---------gact-cat
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47758 20 -     66298 AATGA----CATGG-TCT---------GACT-GGC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4572 17 -     10349 agtga----ctta----t---------cact-tTA
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 134 C 0
s Pteropus_alecto.KB030862.1                               5836676 20 -  28871421 aatgg----catgt-ttt---------gact-acc
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533251 20 -   4952924 aatgg----catgt-ttt---------gact-acc
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095321 20 +  38429054 aatga----catttaaat---------gacT-CC-
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51684  8 +     55069 AATGA----TAT-----------------------
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                       2909318 19 +   3329780 aatgg----ta-at-ttt---------gact-acc
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24759 20 +     27361 AATGA----TCCAC-TTT---------GAGT-CCT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118118 20 + 195417433 AATGA----TCCAC-TTT---------GAGT-CCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232367 20 -   7961872 AATGA----TCCAC-TTT---------GAGT-CCT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70721 20 -    116970 aatgg----catgt-ttt---------gact-acc
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                237 20 +     27962 AATGA----TCCCC-TTT---------GAGT-CCT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              237 20 +      6077 AATGA----TCCCC-TTT---------GCGT-CCT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              258 20 +      5971 AATGA----TCCCC-TTC---------GAGT-CCT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                310 20 +      5932 AATGA----TCCCC-TTC---------GAGT-CCT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               461 20 -      2099 AATGA----CCCCC-TTC---------GAGT-CCT
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387496 20 - 209938924 AATGA----TCCCC-TTT---------GAGT-CCT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 261 20 +      5979 AATGA----CCCCC-TTC---------GAGT-CCT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                                636 20 -      4301 AATGA----TCCCC-TTT---------GCGT-CCT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6293 20 +     16473 AATGA----TATAC-CCT---------GGCT-TCC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234727 20 +   5703754 AATGC----TCCAC-TTT---------GAGT-CCT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4317 20 +     21866 AATGC----TCCAC-TTT---------GAGT-CCT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112421 20 +    313613 AATGA----TGCAC-TTT---------GGCC-CCC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 8 C 0
s Semnopithecus_entellus.k141_158471                         21249 20 +     27374 AATGA----TCCAC-TTT---------GAGT-CCT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24764 20 +     58920 AATGA----TCCAC-TTT---------GAGT-CCT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11261 20 -     45317 AATGA----TCCAC-TTT---------GAGT-CCT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18918 20 -     42441 AATGA----TCCAC-TTT---------GAGT-CCT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21600 20 -     29113 AATGA----TCCAC-TTT---------GAGT-CCT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24672 20 -     48123 AATGA----TCCAC-TTT---------GAGT-CCT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854397 20 -   1910179 AATGA----TGTAC-TTT---------GACT-CCC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855552  5 +   3870691 aatga------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 5
s Spilogale_gracilis.SpiGra_flattened_line_13525              2998 17 -     97271 aatga----ctta----t---------cact-tta
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 706 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             120984 18 +    196729 a-tga----tatac-ttt---------gac-tcc-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                    6639720 19 +  69701581 AATGA----TATAT--TT---------GGCT-CCC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386844 20 +   1523678 AATGA----TCCAC-TTT---------GAGT-CCT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                 895 20 -      2009 aAGGA----TATAC-TTT---------GACT-CTT
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187489 20 +    199430 TGTGA----TAGAC-TTG---------GGCT-CCC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101444 20 -    539355 TGTGA----TAGAC-TTT---------GGCT-CCC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                3199 29 +      6850 TAtta----tttat-ttttttagagatgagg-cct
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3284 29 +     20590 TAtta----tttgt-ttttttagagatgagg-cct
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349154 20 - 186847797 AATGA----TCCAC-TTT---------GAGT-CCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16288 20 -     31044 aATGA----TAAAC-TTT---------GACT-CTT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475567 20 -    610378 AATGG----TACAG-TTT---------GACT-ACC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16813 20 +     26378 AATGA----TCCAC-TTT---------GAGT-CCT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29494 20 -     78344 AATGA----TCCAC-TTT---------GAGT-CCT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16134 20 +     25722 AATGA----TCCAC-TTT---------GAGT-CCT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24357 20 -     62838 AATGA----TCCAC-TTT---------GAGT-CCT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24476 20 +     46913 AATGA----TCCAC-TTT---------GAGT-CCT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5284 20 -     28527 AATGA----TCCAC-TTT---------GAGT-CCT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26296 20 -     64340 AATGA----TCCAC-TTT---------GAGT-CCT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24333 20 -     63452 AATGA----TCCAC-TTT---------GAGT-CCT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5775 20 +     22490 AATGA----TCCAC-TTT---------GAGT-CCT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3395 20 +      4141 AATGA----TCCAC-TTT---------GAGT-CCT
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6201 20 -     13050 AATGA----TCCAC-TTT---------GAGT-CCT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251436 20 -   6242583 AATGA----TCCAC-TTT---------GAGT-CCT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57170 20 +     59866 AATGA----TCCAC-TTT---------GAGT-CCT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478897 20 -  10818551 aatga----tctgc-ttt---------gact-cct
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB338335.1                                  258 19 -       332 AATGA----TAT-C-TTT---------GACT-TTT
i Tupaia_chinensis.KB338335.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3415 19 -     70247 AATGC----TAT-C-TTT---------GACT-CTT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359850 20 -  33153633 aatga----tacac-ttt---------ggct-ccc
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103634 20 -    105689 AGTAG----TGTCT-TTT---------GACT-GCC
i Uropsilus_gracilis.UroGra_scaffold_7153                I 7 C 0
s Ursus_maritimus.KK499267.1                                177622 17 +   5085361 agtga----ctta----t---------cact-tta
i Ursus_maritimus.KK499267.1                             I 110 C 0
s Varecia_rubra.k141_787544                                  21371 20 -     30710 aatga----tgtaa-ttt---------gact-cct
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20279 20 -    147434 aatga----tgtaa-ttt---------gact-cct
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74940 20 +   5488506 aatga----catgc-ttt---------ggct-ccc
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101021 17 -    112863 agtga----ttta----t---------cact-tTA
i Vulpes_lagopus.VulLag_flattened_line_12041             I 110 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162459  5 -    224448 -----------------------------CT-TCT
i Xerus_inauris.XerIna_scaffold_2302                     I 5 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24905  8 -     86975 agtga----ctt-----------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 130 I 6
s Ziphius_cavirostris.ZipCav_flattened_line_2431392            346 20 +       382 aatga----tacac-ttt---------ggct-ccc
i Ziphius_cavirostris.ZipCav_flattened_line_2431392      C 0 C 0
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        535 1 +     36723 G
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410962 1 +  29979442 a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 20
s Ailurus_fulgens.LNAC01001112.1                            211877 1 +    347723 a
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 20
s Allenopithecus_nigroviridis.k141_3755588                   43846 1 +     53615 G
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39661 1 +     44087 G
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68580 1 -     84148 G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40803 1 -     78289 G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40251 1 +     55831 G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38692 1 -     64179 G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20335 1 -     24835 G
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37318 1 +     45454 G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43017 1 +     70886 G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5144 1 +     30854 G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29283 1 +     42133 G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583789 1 +   2318259 A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172556 1 -    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48888 1 -     68529 A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   47092 1 -     65372 G
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40840 1 +     43593 G
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668850 1 +   5030052 G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20492 1 -     23494 G
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5628 1 +      8415 G
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11802 1 -     32367 G
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       15726 1 -     45910 G
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   396 1 -     15198 A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271078 1 +  21539123 G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7249 1 +     48076 G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2383 1 -     28759 G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29935 1 +     44353 G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45310 1 -     71267 G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19366 1 -     33135 G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2473 1 +     11645 g
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2475 1 -     19611 g
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955621 1 -  23207421 a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2829 1 -      4711 a
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84786 1 +    124022 A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20317 1 +    288883 A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354704 1 +  48749331 A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753272 1 +   1948126 A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543411 1 -  45695690 A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528433 1 -   4408762 A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   4269 1 +     28062 G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39564 1 -     91139 G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17089 1 +     95584 G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17002 1 +    119600 G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6509 1 +     18648 G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6185 1 -     13885 G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14871 1 +     17162 G
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449827 1 + 189096842 G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16120 1 -     18408 G
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629622 1 +  17673402 a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663908 1 +   7040546 a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207568 1 +   1652518 a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501405 1 +  60362399 A
i CanFam4.chr16                                          C 0 I 20
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5035 1 -     23171 a
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 20
s Canis_lupus_dingo.QKWQ01000480.1                          218396 1 +   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 20
s Canis_lupus_familiaris.chr16                            41611521 1 +  59632846 A
i Canis_lupus_familiaris.chr16                           C 0 I 20
s Canis_lupus_orion.HG994398.1                            45103091 1 -  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 I 20
s Capra_aegagrus.CM003241.1                               27407500 1 -  46296322 A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589773 1 +  44709034 A
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265620 1 +    496798 t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                442 1 +      5315 A
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75276 1 -    217609 a
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1405 1 -     12580 G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39291 1 +     53515 G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367523 1 -  26074798 G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4412 1 -     34880 G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63507 1 -     89041 G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13900 1 -     50533 t
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488487 1 -  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15320 1 +     27315 a
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137006 1 -   4669795 G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40747 1 +     47900 G
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40579 1 -     44860 G
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40561 1 -    148725 G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23618 1 -     40656 G
i Cercopithecus_ascanius.k141_3120866                    I 71 C 0
s Cercopithecus_cephus.k141_4183004                           3555 1 +     20796 G
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7810 1 -     17524 G
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23502 1 -     34525 G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8222 1 -     25376 G
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360699 1 -  39242232 G
i Cercopithecus_albogularis.ctg5                               C 0 I 76
s Cercopithecus_mona.ctg39                                  266527 1 +  21565898 G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27973 1 -     45857 G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23764 1 -     32606 G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27492 1 +     27662 G
i Cercopithecus_petaurista.k141_1716667                  I 79 C 0
s Cercopithecus_pogonias.k141_6079                           21463 1 +     70610 G
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18328 1 +     36323 G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9306 1 -     19938 G
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             26891 1 -     33796 g
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1086 1 -     15404 g
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5370 1 -     32913 G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15783 1 -     40346 G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16047 1 +    216457 G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15826 1 +     39636 G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            259 1 +      5346 G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38911 1 -    112038 G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4483 1 +     34062 G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339226 1 +  18827391 G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5835 1 -     44032 G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300552 1 - 135778131 G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405083 1 -   2368649 G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_1559707                              4967 1 -      6605 G
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8810 1 +     10921 A
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2105512 1 -   2246927 G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288918 1 +  12879189 g
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623949 1 -  35494412 a
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660774 1 -   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135566 1 -    198055 a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2151 1 +     19438 A
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238176 1 -    607251 A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906430 1 +  41312741 a
i Enhydra_lutris.KZ291758.1                              C 0 I 20
s Eptesicus_fuscus.JH977646.1                             12573712 1 +  14770903 a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037743 1 -   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371677 1 +  39960074 a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408463 1 -    498745 a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258782 1 +  21539334 G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63500 1 -    133382 a
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3716 1 +      7672 a
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11878 1 -     24895 g
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39590 1 -     70999 g
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83550 1 +    112731 g
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40122 1 +     68309 g
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50447 1 -     65740 g
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21077 1 -     75513 g
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45270 1 -     97555 g
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1995 1 +     30972 g
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39720 1 -     52037 g
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56121 1 -    111500 g
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg3793                                     119307 1 -    137831 G
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             2847 1 +     22493 G
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            15040 1 -     32986 G
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15092 1 +     18121 g
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89854 1 -     95226 A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Gorilla_beringei.k141_3358147                                886 1 -      8343 G
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250386 1 - 186649187 G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11811 1 -     40692 g
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33213 1 +     49394 g
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58081 1 -     66874 g
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6958 1 -     42923 g
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13954 1 -     53142 g
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7607 1 +     48891 A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11094 1 +     12639 G
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6206 1 -     36432 a
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546041 1 -   1711038 A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45350 1 +     49977 A
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138282 1 -    630532 G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               1315 1 +     12352 G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8498 1 +     55766 G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047837 1 + 191637585 G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797169 1 +  11177569 G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375185 1 +   7955117 G
i Ictidomys_tridecemlineatus.JH393364.1                  I 5 C 0
s Indri_indri.k141_1634743                                     229 1 -      1784 g
i Indri_indri.k141_1634743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1736 1 -     16823 A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64225 1 -     97402 A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39625 1 +    110728 G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59221 1 -     65777 A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756603 1 +  30322482 g
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         330 1 -     13097 G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            281 1 +      5940 G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6534 1 -     11567 G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7915 1 -     12945 G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5252 1 +     29618 g
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5251 1 +     31569 g
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5257 1 +     24756 g
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5256 1 +     16388 g
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809519 1 -   3914936 a
i Leptonychotes_weddellii.KB714746.1                     I 9 I 20
s Lipotes_vexillifer.KE559953.1                             333259 1 +    662738 A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328962 1 -   1826925 G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2285 1 +     19643 G
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5035943 1 -   6120653 G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39076254 1 +  43346337 G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41610676 1 +  59628241 a
i Lycaon_pictus.CM007581.1                               C 0 I 20
s Macaca_arctoides.k141_1757516                              41242 1 -     61512 G
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368870 1 -  60120075 G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21190 1 +     30207 G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18293 1 -     24934 G
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21077 1 +     30527 G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32266 1 -     50087 G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42004 1 +     51645 g
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410578 1 - 187317192 G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395461 1 +  25927173 G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44593 1 -     62418 G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21280 1 +     24253 G
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41037 1 +     59329 G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266869 1 +    668171 G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18215 1 +     21031 G
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31947 1 +     33478 G
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219223 1 -    270270 A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318345 1 +  24302211 G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353177 1 -    752769 G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669956 1 -    737560 A
i Manis_javanica.JSZB01003497.1                          C 0 I 16
s Manis_pentadactyla.KN006162.1                             217250 1 +    317179 A
i Manis_pentadactyla.KN006162.1                          C 0 I 16
s Marmota_marmota.CZRN01000018.1                           7489278 1 +  40650429 G
i Marmota_marmota.CZRN01000018.1                         I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14444 1 -     74585 A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 20
s Mesoplodon_bidens.MesBid_scaffold_6114                     79803 1 +     93471 a
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 6293 1 +     17804 G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7066 1 -     12984 G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15028 1 -     26561 G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980854 1 +  93316391 G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180531 1 +    200668 A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         18256 1 -     27822 G
i Miopithecus_ogouensis.k141_1534655                     C 0 I 79
s Mirounga_angustirostris.MirAng_flattened_line_54046         4529 1 +     27589 A
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 9 I 20
s Mirza_zaza.k141_766280                                     48715 1 -     62432 t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351692 1 +    437263 a
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174701 1 +    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22759 1 -     82753 A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          33635 1 +     47283 A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343485 1 +  14710649 a
i Mustela_putorius.JH418006.1                            C 0 I 20
s Myotis_brandtii.KE162005.1                               9788068 1 +  10118263 a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378479 1 +   6019432 a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               378299 1 +   4330536 A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        2018 1 +      3929 a
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116046 1 +    130748 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              24621 1 +     34575 G
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464916 1 -  31847680 a
i Neomonachus_schauinslandi.NINY01007730.1               I 9 I 20
s Neophocaena_asiaeorientalis.KZ687982.1                   1225861 1 -   7148211 a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122907 1 -    149072 G
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49567 1 -    132029 G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5663 1 -     16345 G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11546 1 +     22201 G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409883 1 -  22158432 G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21946 1 -     54323 G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194291 1 +   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 20
s Nycticebus_bengalensis.LG01                             93631058 1 + 196305487 G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              447 1 +      2758 G
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559338 1 - 199412804 G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447699 1 +   2017862 A
i Odobenus_rosmarus.KB229312.1                           I 6 I 20
s Odocoileus_virginianus.KZ100018.1                         434747 1 -    630418 A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12738 1 +    150152 A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8095131 1 +  10937097 a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35354 1 +    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 20
s Otolemur_crassicaudatus.k141_85057                         22583 1 -     23432 G
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347148 1 +   1103335 G
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402727 1 -  44047080 A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3246 1 +     17875 A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467775 1 - 189151597 G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614170 1 +   2937107 A
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   239189 1 - 183742232 G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5656 1 +     21308 G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286693 1 -  20919399 G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18309 1 -     27687 G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11445 1 +     16796 G
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18255 1 -     23640 G
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21147 1 +     31479 G
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13518 1 -     24908 G
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10989 1 -     15039 a
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            5075 1 +      7560 G
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60782 1 -     63152 G
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43381 1 +     45295 G
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1060 1 +      5735 G
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45906 1 +     46691 C
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61261 1 +    207309 G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2381 1 -     25401 G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28096 1 +     58159 G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28372 1 +     63561 G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28135 1 +     51148 G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553128 1 -   4542175 G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28119 1 +     51125 G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3073 1 -      8168 a
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4547 1 +     39866 G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39035 1 -     87950 G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39428 1 -     88961 G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4128 1 -     39403 G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39081 1 +     87928 G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4125 1 -     60166 G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11061 1 -     67232 G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38977 1 -     90634 G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40445 1 +     89403 G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173392 1 - 189387572 G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188390 1 -   9816681 G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23561 1 +     69807 G
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40756 1 -     80239 G
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8264 1 +     14086 g
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979761 1 +   4620579 G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562338 1 -   2598838 G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79425 1 -     79582 g
i Propithecus_coronatus.k141_149744                      C 0 C 0
s Propithecus_diadema.k141_153680                              580 1 -     11706 g
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4315 1 -     30655 g
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30640 1 +     46564 g
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90931 1 -     98465 g
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4553 1 +     35169 g
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47778 1 -     66298 A
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4589 1 -     10349 A
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 I 20
s Pteropus_alecto.KB030862.1                               5836696 1 -  28871421 a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533271 1 -   4952924 a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909337 1 +   3329780 a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24779 1 +     27361 G
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118138 1 + 195417433 G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232387 1 -   7961872 G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70741 1 -    116970 a
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                257 1 +     27962 G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              257 1 +      6077 G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              278 1 +      5971 G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                330 1 +      5932 G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               481 1 -      2099 G
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387516 1 - 209938924 G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 281 1 +      5979 G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                                656 1 -      4301 G
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6313 1 +     16473 A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234747 1 +   5703754 G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4337 1 +     21866 G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112441 1 +    313613 A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21269 1 +     27374 G
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24784 1 +     58920 G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11281 1 -     45317 G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18938 1 -     42441 G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21620 1 -     29113 G
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24692 1 -     48123 G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854417 1 -   1910179 A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855562 1 +   3870691 G
i Spermophilus_dauricus.KZ294078.1                       I 5 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3015 1 -     97271 a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 20
s Sus_scrofa.CM000828.4                                    6639739 1 +  69701581 A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386864 1 +   1523678 G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                 915 1 -      2009 G
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187509 1 +    199430 A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101464 1 -    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                3228 1 +      6850 t
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3313 1 +     20590 t
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349174 1 - 186847797 G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16308 1 -     31044 G
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475587 1 -    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16833 1 +     26378 G
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29514 1 -     78344 G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16154 1 +     25722 G
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24377 1 -     62838 G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24496 1 +     46913 G
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5304 1 -     28527 G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26316 1 -     64340 G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24353 1 -     63452 G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5795 1 +     22490 G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3415 1 +      4141 G
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6221 1 -     13050 G
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251456 1 -   6242583 G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57190 1 +     59866 G
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478917 1 -  10818551 g
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB338335.1                                  277 1 -       332 G
i Tupaia_chinensis.KB338335.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3434 1 -     70247 G
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359870 1 -  33153633 a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103654 1 -    105689 A
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177639 1 +   5085361 a
i Ursus_maritimus.KK499267.1                             C 0 I 20
s Varecia_rubra.k141_787544                                  21391 1 -     30710 g
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20299 1 -    147434 g
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74960 1 +   5488506 a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101038 1 -    112863 A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 20
s Xerus_inauris.XerIna_scaffold_2302                        162464 1 -    224448 T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24919 1 -     86975 A
i Zalophus_californianus.ZalCal_flattened_line_17732     I 6 I 20
s Ziphius_cavirostris.ZipCav_flattened_line_2431392            366 1 +       382 a
i Ziphius_cavirostris.ZipCav_flattened_line_2431392      C 0 C 0
e Allochrocebus_solatus.k141_3554717                         14582 0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904 0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Suricata_suricatta.SurSur_flattened_line_6629             121002 2 +    196729 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51692 1 +     55069 I
e Puma_concolor.QAVW01001104.1                            18095341 2 +  38429054 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11380 2 +     78924 I
e Panthera_tigris.KE722367.1                               3968517 2 +   8748460 I
e Panthera_pardus.KV860321.1                              18457789 2 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   20463 2 -    230217 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Mungos_mungo.MunMun_flattened_line_18455                   14408 2 -     63510 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       146290 0 +    207569 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  65318 2 +     83186 I
e Helogale_parvula.HelPar_flattened_line_2585                26639 2 -    327341 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Felis_nigripes.FelNig_flattened_line_31944                 23875 2 -     30238 I
e Felis_catus_fca126.CM031415.1                          185112527 2 - 205367284 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129               323 2 +     87169 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Condylura_cristata.JH655891.1                           35803381 0 +  53390261 C
e Colobus_guereza.LG01                                      374268 0 - 200372422 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           809086 2 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        536 5 +     36723 GC---T----GT
s Acinonyx_jubatus.LLWD01001279.1                           809088 5 +   1699592 GC---T----AT
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410983 5 +  29979442 gc---a----at
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 20 C 0
s Ailurus_fulgens.LNAC01001112.1                            211898 5 +    347723 gc---a----at
i Ailurus_fulgens.LNAC01001112.1                         I 20 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43847 5 +     53615 GC---T----GT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39662 5 +     44087 GC---T----GT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68581 5 -     84148 GC---T----GT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40804 5 -     78289 GC---T----GT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40252 5 +     55831 GC---T----GT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38693 5 -     64179 GC---T----GT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20336 5 -     24835 GC---T----GT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37319 5 +     45454 GC---T----GT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43018 5 +     70886 GC---T----GT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5145 5 +     30854 GC---T----GT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29284 5 +     42133 GC---T----GT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583790 8 +   2318259 GGTAAT----AT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172557 5 -    412891 CC---G----AT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48889 8 -     68529 GGTAAT----AT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   47093 5 -     65372 GC---T----CT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40841 5 +     43593 GC---T----GT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668851 5 +   5030052 GC---T----CT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20493 5 -     23494 GC---T----GT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5629 5 +      8415 GC---T----GT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11803 5 -     32367 GT---T----GT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       15727 5 -     45910 GC---C----AT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   397 5 -     15198 CC---T----AT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271079 5 +  21539123 GC---T----GT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7250 5 +     48076 GC---T----GT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2384 5 -     28759 GC---T----GT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29936 5 +     44353 GC---T----GT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45311 5 -     71267 GC---T----GT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19367 5 -     33135 GC---T----GT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2474 5 +     11645 gc---c----at
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2476 5 -     19611 gc---c----at
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955622 8 -  23207421 gc---taA-TAT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2830 8 -      4711 gc---taA-TAT
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84787 8 +    124022 GGTAAT----AT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20318 8 +    288883 GGTACT----AT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354705 8 +  48749331 GGTACT----AT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753273 8 +   1948126 GGTACT----AT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543412 8 -  45695690 GGTACT----AT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528434 8 -   4408762 GGTACT----AT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   4270 5 +     28062 GC---T----GT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39565 5 -     91139 GC---T----GT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17090 5 +     95584 GC---T----GT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17003 5 +    119600 GC---T----GT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6510 5 +     18648 GC---T----GT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6186 5 -     13885 GC---T----GT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14872 5 +     17162 GC---T----GA
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449828 5 + 189096842 GC---T----GA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16121 5 -     18408 GC---T----GA
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629623 5 +  17673402 gc---t----gt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663909 5 +   7040546 gc---t----gt
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207569 5 +   1652518 gc---t----gt
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501426 5 +  60362399 GT---G----AT
i CanFam4.chr16                                          I 20 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5056 5 -     23171 gt---g----at
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 20 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218417 5 +   9314153 gt---g----at
i Canis_lupus_dingo.QKWQ01000480.1                       I 20 C 0
s Canis_lupus_familiaris.chr16                            41611542 5 +  59632846 GT---G----AT
i Canis_lupus_familiaris.chr16                           I 20 C 0
s Canis_lupus_orion.HG994398.1                            45103112 5 -  63665305 gt---g----at
i Canis_lupus_orion.HG994398.1                           I 20 C 0
s Capra_aegagrus.CM003241.1                               27407501 8 -  46296322 GGTAAT----GT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589774 8 +  44709034 GGTAAT----GT
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           265621 5 +    496798 gc---t----at
i Carlito_syrichta.NW_007259797.1                        C 0 I 289
s Carollia_perspicillata.CarPer_scaffold_170178                443 5 +      5315 CC---T----AT
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75277 5 -    217609 gc---t----at
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1406 5 -     12580 GC---T----GT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39292 5 +     53515 GC---T----GT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367524 5 -  26074798 GC---T----GT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4413 5 -     34880 GC---T----GT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63508 5 -     89041 GC---T----GT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        13901 5 -     50533 gc---t----at
i Cephalopachus_bancanus.k141_1275952                    C 0 I 289
s Ceratotherium_simum.JH767749.1                          15488488 5 -  27778364 gc---t----ct
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15321 5 +     27315 gc---t----ct
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137007 5 -   4669795 GC---T----GT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40748 5 +     47900 GC---T----GT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40580 5 -     44860 GC---T----GT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40562 5 -    148725 GC---T----GT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23619 5 -     40656 GC---T----GT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3556 5 +     20796 GC---T----GT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7811 5 -     17524 GC---T----GT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23503 5 -     34525 GC---T----GT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8223 5 -     25376 GC---T----GT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360776 5 -  39242232 GC---T----GT
i Cercopithecus_albogularis.ctg5                               I 76 C 0
s Cercopithecus_mona.ctg39                                  266528 5 +  21565898 AC---T----GT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        27974 5 -     45857 GC---T----GT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23765 5 -     32606 GC---T----GT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27493 5 +     27662 GC---T----GT
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21464 5 +     70610 GC---T----GT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18329 5 +     36323 GC---T----GT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9307 5 -     19938 GC---T----AT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             26892 5 -     33796 gc---c----at
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1087 5 -     15404 gc---c----at
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5371 5 -     32913 GC---T----GC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15784 5 -     40346 GC---T----GC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16048 5 +    216457 GC---T----GC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15827 5 +     39636 GC---T----GC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            260 5 +      5346 GC---T----GT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38912 5 -    112038 GC---T----GT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4484 5 +     34062 GC---T----GT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339227 5 +  18827391 GC---T----GT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5836 5 -     44032 GC---T----GT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300553 5 - 135778131 GC---T----GT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405084 5 -   2368649 GC---T----GT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_1559707                              4968 5 -      6605 GC---T----GT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803381 4 +  53390261 -C---T----AC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8811 5 +     10921 GC---T----AT
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               325 5 +     87169 gc---t----at
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Dasypus_novemcinctus.JH564415.1                          2105513 5 -   2246927 GC---T----AT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288919 5 +  12879189 gc---c----at
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623950 8 -  35494412 gc---taA-TAT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660775 5 -   1390856 gc---t----ct
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135567 5 -    198055 gc---t----ct
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2152 5 +     19438 GC---T----AT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238177 8 -    607251 GGTAGT----AT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906451 5 +  41312741 gc---a----at
i Enhydra_lutris.KZ291758.1                              I 20 C 0
s Eptesicus_fuscus.JH977646.1                             12573713 5 +  14770903 cc---t----gt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037744 5 -   4378816 cc---t----cg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371678 5 +  39960074 cc---t----cg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408464 5 -    498745 cc---t----cg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258783 5 +  21539334 GC---T----GT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63501 8 -    133382 gc---taA-TAT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3717 8 +      7672 gc---taa-taT
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11879 5 -     24895 gc---c----at
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39591 5 -     70999 gc---c----at
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83551 5 +    112731 gc---c----at
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40123 5 +     68309 gc---c----at
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50448 5 -     65740 gc---t----at
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21078 5 -     75513 gc---c----at
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45271 5 -     97555 gc---c----at
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            1996 5 +     30972 gc---c----at
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39721 5 -     52037 gc---c----at
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56122 5 -    111500 gc---c----at
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242747 5 - 206538554 GC---T----AT
i Felis_catus.CM001381.2                                 I 2 C 0
s Felis_catus_fca126.CM031415.1                          185112529 5 - 205367284 GC---T----AT
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23877 5 -     30238 GC---T----AT
i Felis_nigripes.FelNig_flattened_line_31944             I 2 C 0
s Galago_moholi.ctg3793                                     119308 5 -    137831 TC---C----AT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             2848 5 +     22493 TC---C----AT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            15041 5 -     32986 GC---C----AT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15093 5 +     18121 gc---t----at
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89855 8 -     95226 GGTAGT----AT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Gorilla_beringei.k141_3358147                                887 5 -      8343 GC---T----GT
i Gorilla_beringei.k141_3358147                          C 0 I 14
s Gorilla_gorilla.LT578341.1                                250387 5 - 186649187 GC---T----GT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11812 5 -     40692 gc---c----at
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33214 5 +     49394 gc---c----at
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58082 5 -     66874 gc---c----at
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6959 5 -     42923 gc---c----at
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13955 5 -     53142 gc---c----at
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26641 5 -    327341 GC---T----AC
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7608 8 +     48891 GGTAAT----AT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11095 5 +     12639 GC---T----GT
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6207 8 -     36432 gc---taa-tgt
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546042 5 -   1711038 GC---T----AT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45351 5 +     49977 GC---T----AT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138283 5 -    630532 GC---T----GT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65320 5 +     83186 GC---T----AT
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 2 C 0
s Hylobates_agilis.k141_1155965                               1316 5 +     12352 GC---T----GT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8499 5 +     55766 GC---T----GT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047838 5 + 191637585 GC---T----GT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797170 5 +  11177569 GC---T----GT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375186 5 +   7955117 GA---T----AT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_1634743                                     230 5 -      1784 gc---c----at
i Indri_indri.k141_1634743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1737 8 -     16823 GC---TAA-TAT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64226 8 -     97402 GC---T-AGTAT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39626 5 +    110728 GC---T----GT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59222 5 -     65777 CC---T----GT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14756604 5 +  30322482 gc---c----at
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         331 5 -     13097 GC---T----CT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            282 5 +      5940 CC---T----CT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6535 5 -     11567 GC---T----GT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7916 5 -     12945 GC---T----GT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5253 5 +     29618 gc---c----gt
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5252 5 +     31569 gc---c----gt
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5258 5 +     24756 gc---c----gt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5257 5 +     16388 gc---c----gt
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809540 5 -   3914936 gc---a----at
i Leptonychotes_weddellii.KB714746.1                     I 20 C 0
s Lipotes_vexillifer.KE559953.1                             333260 8 +    662738 GC---TAA-TAT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328963 5 -   1826925 GC---T----GT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2286 5 +     19643 GC---C----AT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5035944 5 -   6120653 GC---C----AT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39076255 5 +  43346337 GC---T----AT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41610697 5 +  59628241 gt---g----at
i Lycaon_pictus.CM007581.1                               I 20 C 0
s Macaca_arctoides.k141_1757516                              41243 5 -     61512 GC---T----GT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368871 5 -  60120075 GC---T----GT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21191 5 +     30207 GC---T----GT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18294 5 -     24934 GC---T----GT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21078 5 +     30527 GC---T----GT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32267 5 -     50087 GC---T----GT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42005 5 +     51645 gc---t----at
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410579 5 - 187317192 GC---T----GT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395462 5 +  25927173 GC---T----GT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44594 5 -     62418 GC---T----GT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21281 5 +     24253 GC---T----GT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41038 5 +     59329 GC---T----GT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266870 5 +    668171 GC---T----GT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18216 5 +     21031 GC---T----GT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31948 5 +     33478 GC---T----GT
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219224 5 -    270270 GC---T----AT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318346 5 +  24302211 GC---T----GT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353178 5 -    752769 GC---T----GT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669973 5 -    737560 GC---C----AT
i Manis_javanica.JSZB01003497.1                          I 16 C 0
s Manis_pentadactyla.KN006162.1                             217267 5 +    317179 GC---C----AT
i Manis_pentadactyla.KN006162.1                          I 16 C 0
s Marmota_marmota.CZRN01000018.1                           7489279 5 +  40650429 GA---T----AT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146290 2 +    207569 ----------AT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14465 5 -     74585 GC---A----AT
i Mellivora_capensis.MelCap_flattened_line_19308         I 20 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79804 8 +     93471 gc---taA-TAT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 6294 5 +     17804 GC---T----GT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7067 5 -     12984 GC---T----GT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15029 5 -     26561 GC---T----GT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980855 5 +  93316391 GC---C----AT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180532 5 +    200668 CC---T----AT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         18336 5 -     27822 GC---T----GT
i Miopithecus_ogouensis.k141_1534655                     I 79 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4550 5 +     27589 GC---A----AT
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 20 C 0
s Mirza_zaza.k141_766280                                     48716 5 -     62432 gc---c----at
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351693 8 +    437263 gc---taA-TAT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174702 5 +    366855 GC---T----AC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22760 8 -     82753 GGTAGT----AG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14410 5 -     63510 GC---A----AT
i Mungos_mungo.MunMun_flattened_line_18455               I 2 C 0
s Murina_feae.MurFea_scaffold_17764                          33636 5 +     47283 CC---T----GT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343506 5 +  14710649 gc---a----at
i Mustela_putorius.JH418006.1                            I 20 C 0
s Myotis_brandtii.KE162005.1                               9788069 5 +  10118263 cc---t----gt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378480 5 +   6019432 cc---t----gt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               378300 5 +   4330536 CC---T----GT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        2019 5 +      3929 cc---t----gt
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116047 5 +    130748 CC---T----AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              24622 5 +     34575 GC---T----GT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464937 5 -  31847680 gc---a----at
i Neomonachus_schauinslandi.NINY01007730.1               I 20 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225862 8 -   7148211 gc---taA-TAT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122908 5 -    149072 CC---T----GT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49568 5 -    132029 GC---T----GT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5664 5 -     16345 GC---T----GT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11547 5 +     22201 GC---T----GT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409884 5 -  22158432 GC---T----GT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21947 5 -     54323 GC---T----GT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194312 5 +   9404916 gt---g----at
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 20 C 0
s Nycticebus_bengalensis.LG01                             93631059 5 + 196305487 GC---C----AT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              448 5 +      2758 GC---C----AT
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559339 5 - 199412804 GC---C----AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447720 5 +   2017862 GC---A----GT
i Odobenus_rosmarus.KB229312.1                           I 20 C 0
s Odocoileus_virginianus.KZ100018.1                         434748 8 -    630418 GGTAGT----AT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12739 8 +    150152 GGTAGT----AT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8095132 8 +  10937097 gc---taA-TAT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35375 5 +    559221 gt---g----at
i Otocyon_megalotis.JAEUCK010005147.1                    I 20 C 0
s Otolemur_crassicaudatus.k141_85057                         22584 5 -     23432 GC---C----AT
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347149 5 +   1103335 GC---C----AT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402728 8 -  44047080 GGTAAT----AT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3247 8 +     17875 GGTAAT----AT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467776 5 - 189151597 GC---T----GT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20465 5 -    230217 GC---T----AT
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                              18457791 5 -  18783137 GC---T----AT
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               3968519 5 +   8748460 GC---T----AT
i Panthera_tigris.KE722367.1                             I 2 C 0
s Pantholops_hodgsonii.KE114653.1                          1614171 8 +   2937107 GGTAAT----AT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   239190 5 - 183742232 GC---T----GT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5657 5 +     21308 GC---T----GT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286694 5 -  20919399 GC---T----GT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18310 5 -     27687 GC---T----GT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11446 5 +     16796 GC---T----GT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18256 5 -     23640 GC---T----GT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11382 5 +     78924 gc---c----at
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Perodicticus_ibeanus.k141_1921260                          21148 5 +     31479 GC---C----AT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13519 5 -     24908 GC---C----AT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10990 8 -     15039 gc---taa-taT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            5076 5 +      7560 GC---T----GT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60783 5 -     63152 GC---T----GT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43382 5 +     45295 GC---T----GT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1061 5 +      5735 GC---T----GT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45907 5 +     46691 CC---T----GT
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61262 5 +    207309 GC---T----GT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2382 5 -     25401 GC---T----GT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28097 5 +     58159 GC---T----GT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28373 5 +     63561 GC---T----GT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28136 5 +     51148 GC---T----GT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553129 5 -   4542175 GC---T----GT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28120 5 +     51125 GC---T----GT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3074 8 -      8168 gc---taa-taT
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4548 5 +     39866 GC---T----GC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39036 5 -     87950 GC---T----GC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39429 5 -     88961 GC---T----GC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4129 5 -     39403 GC---T----GC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39082 5 +     87928 GC---T----GC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4126 5 -     60166 GC---T----GC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11062 5 -     67232 GC---T----GC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38978 5 -     90634 GC---T----GC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40446 5 +     89403 GC---T----GC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173393 5 - 189387572 GC---T----GT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188391 5 -   9816681 GC---T----GT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23562 5 +     69807 GC---T----GT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40757 5 -     80239 GC---T----GT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8265 5 +     14086 gc---t----gt
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979762 5 +   4620579 GC---C----AT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562339 5 -   2598838 GC---C----AT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_149744                          79426 5 -     79582 gc---c----at
i Propithecus_coronatus.k141_149744                      C 0 n 0
s Propithecus_diadema.k141_153680                              581 5 -     11706 gc---c----at
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4316 5 -     30655 gc---c----at
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30641 5 +     46564 gc---c----at
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90932 5 -     98465 gc---c----at
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4554 5 +     35169 gc---c----at
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47779 5 -     66298 CC---T----AT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4610 5 -     10349 GC---A----AT
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 20 C 0
s Pteropus_alecto.KB030862.1                               5836697 5 -  28871421 gc---t----at
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533272 5 -   4952924 gc---t----at
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095343 5 +  38429054 GC---T----AT
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             21724 4 +     91421 -C---A----GT
i Pygathrix_cinerea.k141_1153803                         N 0 C 0
s Pygathrix_nigripes_b.ctg100                                  148218 4 -   7812017 -C---A----GT
i Pygathrix_nigripes_b.ctg100                               N 0 C 0
s Pygathrix_nigripes_a.k141_215492                              2594 4 +     72585 -C---A----GT
i Pygathrix_nigripes_a.k141_215492                         N 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909338 5 +   3329780 gc---t----at
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24780 5 +     27361 GC---T----GT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118139 5 + 195417433 GC---T----GT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232388 5 -   7961872 GC---T----GT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70742 5 -    116970 gc---t----at
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                258 5 +     27962 GC---T----GT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              258 5 +      6077 GC---T----CT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              279 5 +      5971 GC---T----GT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                331 5 +      5932 GC---T----GT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               482 5 -      2099 GC---T----GT
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387517 5 - 209938924 GC---T----GT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 282 5 +      5979 GC---T----GT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                                657 5 -      4301 GC---T----CT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6314 8 +     16473 GGTAAT----CT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234748 5 +   5703754 GC---T----GT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4338 5 +     21866 GC---T----GT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112442 5 +    313613 GC---T----AT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21270 5 +     27374 GC---T----GT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24785 5 +     58920 GC---T----GT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11282 5 -     45317 GC---T----GT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18939 5 -     42441 GC---T----GT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21621 5 -     29113 GC---T----GT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24693 5 -     48123 GC---T----GT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854418 5 -   1910179 GC---T----GT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855563 5 +   3870691 GA---T----AT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3036 5 -     97271 gc---a----at
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 20 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121004 5 +    196729 gc---t----at
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                    6639740 5 +  69701581 GC---T----AT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386865 5 +   1523678 GC---T----GT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                 916 5 -      2009 TC---T----AG
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187510 5 +    199430 GT---T----GT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101465 5 -    539355 GT---T----CT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                3229 5 +      6850 gc---t----at
i Tarsius_lariang.k141_1780720                           C 0 I 290
s Tarsius_wallacei.k141_226975                                3314 5 +     20590 gc---t----at
i Tarsius_wallacei.k141_226975                           C 0 I 290
s Theropithecus_gelada.CM009954.1                           349175 5 - 186847797 GC---T----GT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475588 5 -    610378 CC---C----AT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16834 5 +     26378 GC---T----GT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29515 5 -     78344 GC---T----GT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16155 5 +     25722 GC---T----GT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24378 5 -     62838 GC---T----GT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24497 5 +     46913 GC---T----GT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5305 5 -     28527 GC---T----GT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26317 5 -     64340 GC---T----GT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24354 5 -     63452 GC---T----GT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5796 5 +     22490 GC---T----GT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3416 5 +      4141 GC---T----GT
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6222 5 -     13050 GC---T----GT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251457 5 -   6242583 GC---T----GT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57191 5 +     59866 GC---T----GT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478918 5 -  10818551 gc---t----at
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB338335.1                                  278 5 -       332 GC---T----GA
i Tupaia_chinensis.KB338335.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3435 5 -     70247 GC---T----GG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359871 8 -  33153633 gc---taA-TAT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103655 5 -    105689 GC---T----AT
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177660 5 +   5085361 gc---a----at
i Ursus_maritimus.KK499267.1                             I 20 C 0
s Varecia_rubra.k141_787544                                  21392 5 -     30710 gc---c----at
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20300 5 -    147434 gc---c----gt
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74961 5 +   5488506 gc---t----gt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101059 5 -    112863 GT---G----AT
i Vulpes_lagopus.VulLag_flattened_line_12041             I 20 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162465 5 -    224448 GC---T----AT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24940 5 -     86975 GC---A----GT
i Zalophus_californianus.ZalCal_flattened_line_17732     I 20 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2431392            367 8 +       382 gc---taa-taT
i Ziphius_cavirostris.ZipCav_flattened_line_2431392      C 0 C 0
e Allochrocebus_solatus.k141_3554717                         14582 0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904 0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   16309 0 -     31044 C
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51692 1 +     55069 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Colobus_guereza.LG01                                      374268 0 - 200372422 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        541 14 +     36723 TACA--G----CT-GAGTTG-A
s Acinonyx_jubatus.LLWD01001279.1                           809093 14 +   1699592 TACA--G----GT-AAGGTG-A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20410988 13 +  29979442 tata--g----at-gaggt--a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            211903 13 +    347723 tcca--g----at-aaggT--A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43852 14 +     53615 TACC--G----CT-GAGGTG-A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39667 14 +     44087 TACC--G----CT-GAGGTG-A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68586 14 -     84148 TACA--A----CT-GAGGTG-A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40809 14 -     78289 TACA--A----CT-GAGGTG-G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40257 14 +     55831 TACA--A----CT-GAGGTG-A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38698 14 -     64179 TACA--A----CT-GAGGTG-G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20341 14 -     24835 TACA--A----CT-GAGGTG-G
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37324 14 +     45454 TACA--A----CT-GAGGTG-G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43023 14 +     70886 TACA--A----CT-GAGGTG-G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5150 14 +     30854 TACA--A----CT-GAGGTG-G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29289 14 +     42133 TACA--A----CT-GAGGTG-G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583798 13 +   2318259 TATA--G----AG-AAGGTG--
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      172562 14 -    412891 CACA--A----AT-CAGTAG-A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48897 13 -     68529 TATA--G----AG-AAGGTG--
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 1
s Aotus_azarae.k141_118258                                   47098 14 -     65372 TACA--G----CT-GAGGTG-A
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40846 14 +     43593 TACA--G----CT-GAGGTG-A
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668856 14 +   5030052 TACA--G----CT-GAGGTG-A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20498 14 -     23494 TACA--G----CT-GAGGTG-A
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5634 14 +      8415 TACA--G----CT-GAGGTG-A
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11808 13 -     32367 TACA--A----AT-AAAGTG--
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 1
s Arctocebus_calabarensis.k141_1364444                       15732 14 -     45910 TCCA--G----TT-GAGGTG-A
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   402 14 -     15198 CACA--A----AT-CAGTTG-A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271084 14 +  21539123 TACA--G----CT-GAGGTG-G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7255 14 +     48076 TACA--G----CT-GAGGTG-G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2389 14 -     28759 TACA--G----CT-GAGGTG-G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29941 14 +     44353 TACA--G----CT-GAGGTG-G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45316 14 -     71267 TACA--G----CT-GAGGTG-G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19372 14 -     33135 TACA--G----CT-GAGGTG-G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2479 14 +     11645 taca--g----at-gaggTG-A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2481 14 -     19611 taca--g----at-gaggTG-A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955630 14 -  23207421 TACC--G----AG-AAGGTG-A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2838 14 -      4711 TACC--G----AG-AAGGTG-A
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84795 13 +    124022 TATA--G----AG-AAGGTG--
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 1
s Bison_bison.KN261452.1                                     20326 13 +    288883 TATA--G----AG-AAGGTG--
i Bison_bison.KN261452.1                                 C 0 I 1
s Bos_indicus.CM003047.1                                  20354713 13 +  48749331 TATA--G----AG-AAGGTG--
i Bos_indicus.CM003047.1                                 C 0 I 1
s Bos_mutus.JH880303.1                                      753281 13 +   1948126 TATA--G----AG-AAGGTG--
i Bos_mutus.JH880303.1                                   C 0 I 1
s Bos_taurus.CM000203.6                                   27543420 13 -  45695690 TATA--G----AG-AAGGTG--
i Bos_taurus.CM000203.6                                  C 0 I 1
s Bubalus_bubalis.KI419123.1                               1528442 13 -   4408762 TATA--G----AG-AAGGTG--
i Bubalus_bubalis.KI419123.1                             C 0 I 1
s Cacajao_ayresi.k141_96119                                   4275 14 +     28062 TACA--G----CT-GAGGTG-A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39570 14 -     91139 TACA--G----CT-GAGGTG-A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17095 14 +     95584 TACA--G----CT-GAGGTG-A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17008 14 +    119600 TACA--G----CT-GAGGTG-A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6515 14 +     18648 TACA--G----CT-GAGGTG-A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6191 14 -     13885 TACA--G----CT-GAGGTG-A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14877 14 +     17162 TACA--G----CT-GAGGTG-A
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449833 14 + 189096842 TACA--G----CT-GAGGTG-A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16126 14 -     18408 TACA--G----CT-GAGGTG-A
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629628 14 +  17673402 taca--g----ag-aaggCG-A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4663914 14 +   7040546 taca--g----ag-aaggCG-A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207574 14 +   1652518 taca--g----ag-aaggCG-A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501431 13 +  60362399 TATA--G----AT-AAGGT--A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5061 13 -     23171 tata--g----at-aaggt--a
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218422 13 +   9314153 tata--g----at-aaggt--a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41611547 13 +  59632846 TATA--G----AT-AAGGT--A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45103117 13 -  63665305 tata--g----at-aaggt--a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407509 13 -  46296322 TATA--G----AG-AAGGTG--
i Capra_aegagrus.CM003241.1                              C 0 I 1
s Capra_hircus.CM004588.1                                 26589782 13 +  44709034 TATA--G----AG-AAGGTG--
i Capra_hircus.CM004588.1                                C 0 I 1
s Carlito_syrichta.NW_007259797.1                           265915 17 +    496798 TATC--A-TCCCT-GAAGTG-A
i Carlito_syrichta.NW_007259797.1                        I 289 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                448 14 +      5315 CACG--A----AT-CAGTTG-G
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75282 14 -    217609 taTG--T----AG-AAGGTG-A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1411 14 -     12580 TACA--G----CT-GAGGTG-A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39297 14 +     53515 TACA--G----CT-GAGGTG-A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367529 14 -  26074798 TCCG--G----CT-GAGGTG-A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4418 14 -     34880 TCCG--G----CT-GAGGTG-A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63513 14 -     89041 TCCG--G----CT-GAGGTG-A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        14195 17 -     50533 TATC--G-TCCCT-GAAGTG-A
i Cephalopachus_bancanus.k141_1275952                    I 289 C 0
s Ceratotherium_simum.JH767749.1                          15488493 14 -  27778364 taca--g----ataa-ggTG-A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15326 14 +     27315 taca--g----ataa-ggTG-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137012 14 -   4669795 TACC--G----CT-GAGGTG-A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40753 14 +     47900 TACC--G----CT-GAGGTG-A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40585 14 -     44860 TACC--G----CT-GAGGTG-A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40567 14 -    148725 TACC--G----CT-GAGGTG-A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23624 14 -     40656 TACC--G----CT-GAGGTG-A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3561 14 +     20796 TACC--G----CT-GAGGTG-A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7816 14 -     17524 TACC--A----CT-GAGGTG-A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23508 14 -     34525 TACC--G----CT-GAGGTG-A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8228 14 -     25376 TACC--G----CT-GAGGTG-A
i Cercopithecus_lowei.k141_2101310                       C 0 I 5
s Cercopithecus_albogularis.ctg5                                  360781 14 -  39242232 TACC--G----CT-GAGGTG-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266533 14 +  21565898 TACC--G----CT-GAGGTG-A
i Cercopithecus_mona.ctg39                               C 0 I 5
s Cercopithecus_neglectus.k141_858615                        27979 14 -     45857 TACC--G----CT-GAGGTG-A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23770 14 -     32606 TACC--G----CT-GAGGTG-A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27498 14 +     27662 TACC--G----CT-GAGGTG-A
i Cercopithecus_petaurista.k141_1716667                  C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21469 14 +     70610 TACC--G----CT-GAGGTG-A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18334 14 +     36323 TACC--A----CT-GAGGTG-A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9312 14 -     19938 TACA--G----AG-AAGGTG-A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             26897 14 -     33796 tacc--g----at-gaggTG-A
i Cheirogaleus_major.k141_666340                         C 0 I 11
s Cheirogaleus_medius.k141_759766                             1092 14 -     15404 taca--g----at-gagATG-A
i Cheirogaleus_medius.k141_759766                        C 0 I 11
s Cheracebus_lucifer.k141_2312002                             5376 14 -     32913 TACA--G----CT-GAGGTG-A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15789 14 -     40346 TACA--G----CT-GAGGTG-A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16053 14 +    216457 TACA--G----CT-GAGGTG-A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15832 14 +     39636 TACA--G----CT-GAGGTG-A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            265 14 +      5346 TACA--G----CT-GAGGTG-A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38917 14 -    112038 TACA--G----CT-GAGGTG-A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4489 14 +     34062 TACA--G----CT-GAGGTG-A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339232 14 +  18827391 TACC--G----CT-GAGGTG-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5841 14 -     44032 TACC--G----CT-GAGGTG-A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300558 14 - 135778131 TACC--G----CT-GAGGTG-A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405089 14 -   2368649 TACC--G----CT-GAGGTG-A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_polykomos.k141_1559707                              4973 14 -      6605 TACC--G----CT-GAGGTG-A
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803385 13 +  53390261 TA--CAG----CC--TTGTG-A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8816 14 +     10921 TACA--G----AT-AAGTTA-A
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               330 14 +     87169 taca--g----at-gaggTG-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2105518 14 -   2246927 TACA--G----AT-AAGGTG-A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        288924 14 +  12879189 taca--g----at-gaggGG-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623958 14 -  35494412 TACC--A----AG-AAGGTG-A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660780 14 -   1390856 taca--g----gtaa-ggTG-A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135572 14 -    198055 taca--g----ataa-ggTG-A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2157 14 +     19438 TCCA--T----AT-ATGGTA-T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238185 13 -    607251 CATA--G----AG-AAGGTG--
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906456 13 +  41312741 taca--g----at-aaggt--a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12573718 14 +  14770903 taca--g----at-aagCTG-A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037749 13 -   4378816 taca--g----ag-a-ggCG-A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371683 13 +  39960074 taca--g----ag-a-ggCG-A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408469 13 -    498745 taca--g----ag-a-ggCG-A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258788 14 +  21539334 TACC--G----CT-GAGGTG-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63509 14 -    133382 TACC--G----AG-AAGGTG-A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3725 14 +      7672 TACC--G----AG-AAGGTG-A
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11884 14 -     24895 taca--g----at-gaggTG-A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39596 14 -     70999 taca--g----at-gaggTG-A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83556 14 +    112731 taca--g----at-gaggTG-A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40128 14 +     68309 taca--g----at-gaggTG-A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50453 14 -     65740 taca--g----at-gaggTG-A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21083 14 -     75513 taca--g----at-gaggTG-A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45276 14 -     97555 taca--g----at-gaggTG-A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2001 14 +     30972 taca--g----at-gaggTG-A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39726 14 -     52037 taca--g----at-gaggTG-A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56127 14 -    111500 taca--g----at-gaggTG-A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242752 14 - 206538554 TACA--G----GT-AAGGTG-A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112534 14 - 205367284 TACA--G----GT-AAGGTG-A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23882 14 -     30238 TACA--G----GT-AAGGTG-A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     119313 14 -    137831 TCCA--G----AT-GAGGTG-C
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             2853 14 +     22493 TCCA--G----AT-GAGGTG-C
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            15046 14 -     32986 TCCA--G----AT-GAGGTG-A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15098 14 +     18121 taca--g----at-caggTG-A
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89863 13 -     95226 TACA--G----AG-GAGGTG--
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 1
s Gorilla_beringei.k141_3358224                                898 14 -      1229 TACA--G----CT-GAGTTG-A
i Gorilla_beringei.k141_3358224                          I 30 I 27
s Gorilla_gorilla.LT578341.1                                250392 14 - 186649187 TACA--G----CT-GAGTTG-A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11817 14 -     40692 taca--g----at-gaggTG-A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33219 14 +     49394 taca--g----at-gaggTG-A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58087 14 -     66874 taca--g----at-gaggTG-A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6964 14 -     42923 taca--g----at-gaggTG-A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13960 14 -     53142 taca--g----at-gaggTG-A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26646 14 -    327341 TACA--G----AT-GAGGTG-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7616 13 +     48891 TATA--G----AG-AAGGTG--
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11100 14 +     12639 TACA--G----AT-AAAGGA-A
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6215 14 -     36432 taat--g----ag-gaggtg-a
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546047 14 -   1711038 TACA--G----Gc-atgttg-a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45356 14 +     49977 TACA--G----GC-ATGACG-A
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138288 14 -    630532 TACA--G----CT-GAGGTG-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65325 14 +     83186 TACA--G----AT-AAGGTG-A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               1321 14 +     12352 TACA--G----CT-GAGGTG-A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8504 14 +     55766 TACA--G----CT-GAGGTG-A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047843 14 + 191637585 TACA--G----CT-GAGGTG-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797175 14 +  11177569 TACA--G----CT-GAGGTG-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375191 13 +   7955117 TATA--G----AT-AAACTG--
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_1634743                                     235 14 -      1784 taca--g----at-gaggTG-A
i Indri_indri.k141_1634743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1745 14 -     16823 TACC--A----AG-AAGGTG-A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64234 14 -     97402 TACC--A----AG-AAGGTG-A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39631 14 +    110728 TACA--G----CT-GAAGTG-G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59227 14 -     65777 TACA--G----AT-AAGCTG-A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 29
s Lemur_catta.scaffold_24                                 14756609 14 +  30322482 taca--g----at-gaggTG-A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         336 14 -     13097 TACA--G----CT-GAGGTG-A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            287 14 +      5940 TACA--G----CT-GAGGTG-A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6540 14 -     11567 TACA--G----CT-GAGGTG-A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7921 14 -     12945 TACA--G----CT-GAGGTG-A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5258 14 +     29618 taca--g----at-gaagTG-A
i Lepilemur_ankaranensis.k141_567626                     C 0 I 13
s Lepilemur_dorsalis.k141_387009                              5257 14 +     31569 taca--g----at-gaagTG-A
i Lepilemur_dorsalis.k141_387009                         C 0 I 11
s Lepilemur_ruficaudatus.k141_330196                          5263 14 +     24756 taca--g----at-gaagTG-A
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 11
s Lepilemur_septentrionalis.k141_360456                       5262 14 +     16388 taca--g----at-gaagTG-A
i Lepilemur_septentrionalis.k141_360456                  C 0 I 11
s Leptonychotes_weddellii.KB714746.1                        809545 13 -   3914936 taca--g----at-caggt--a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333268 14 +    662738 TACC--A----AG-AAGGTG-A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               328968 14 -   1826925 TACC--G----CT-GAGGTG-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2291 14 +     19643 TCCA--G----AT-GAGGTG-A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5035949 14 -   6120653 TCCA--G----AT-GAGGTG-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39076260 14 +  43346337 TTCA--G----AT-AAAGTG-A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41610702 13 +  59628241 tata--g----at-aaggt--a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              41248 14 -     61512 TACC--G----CT-GAGGTG-A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368876 14 -  60120075 TACC--G----CT-GAGGTG-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21196 14 +     30207 TACC--G----CT-GAGGTG-A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18299 14 -     24934 TACC--G----CT-GAGGTG-A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21083 14 +     30527 TACC--G----CT-GAGGTG-A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32272 14 -     50087 TACC--G----CT-GAGGTG-A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42010 14 +     51645 tacc--g----ct-gaggTG-A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410584 14 - 187317192 TACC--G----CT-GAGGTG-A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395467 14 +  25927173 TACC--G----CT-GAGGTG-A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44599 14 -     62418 TACC--G----CT-GAGGTG-A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21286 14 +     24253 TACC--G----CT-GAGGTG-A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41043 14 +     59329 TACC--G----CT-GAGGTG-A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266875 14 +    668171 TACC--G----CT-GAGGTG-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18221 14 +     21031 TACC--G----CT-GAGGTG-A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31953 14 +     33478 TACC--G----CT-GAGGTG-A
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219229 15 -    270270 TCCA--T----AT-ATGGTGCC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318351 14 +  24302211 TACC--G----CT-GAGGTG-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353183 14 -    752769 TACC--G----CT-GAGGTG-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669978 14 -    737560 TATA--G----AT-AAGATG-A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217272 14 +    317179 TATA--G----AT-AAGATG-A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7489284 13 +  40650429 TATA--G----AT-AAACGG--
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                       146292 14 +    207569 TACA--G----TT-AAGTTG-A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14470 13 -     74585 TACA--G----AT-AAGGT--A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79812 14 +     93471 TACC--A----AG-AAGGTG-A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 6299 14 +     17804 TACA--G----CT-GAGGTG-A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7072 14 -     12984 TACA--G----CT-GAGGTG-A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15034 14 -     26561 TACA--G----CT-GAGGTG-A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980860 14 +  93316391 TACA--G----AT-GAGGTG-A
i Microcebus_murinus.CM007674.1                          C 0 I 11
s Micronycteris_hirsuta.MicHir_scaffold_2233                180537 14 +    200668 CACG--G----AT-CATTTG-A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         18341 14 -     27822 TACC--G----CT-GAGGTG-A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4555 13 +     27589 TACA--G----AT-CAGGT--A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     48721 14 -     62432 taca--g----at-gaggta-a
i Mirza_zaza.k141_766280                                 C 0 I 11
s Monodon_monoceros.MonMon_M_scaffold_103                   351701 14 +    437263 TACC--A----AG-AAGGTG-A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174707 14 +    366855 TACG--A----GT-AAGTTG-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22768 13 -     82753 TACA--G----AG-AAGGTG--
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_18455                   14415 14 -     63510 TACA--G----AT-AAGGTG-G
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          33641 14 +     47283 TGCA--G----AT-AAGAGG-A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343511 13 +  14710649 taca--g----at-aaggt--a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9788074 14 +  10118263 taca--g----at-aagCTA-A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378485 14 +   6019432 taca--g----at-aagCTA-A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               378305 14 +   4330536 TACA--G----AT-AAGCTG-A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        2024 14 +      3929 taca--g----at-aaACTA-A
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116052 14 +    130748 TACA--G----AT-AAGGCA-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              24627 14 +     34575 TACC--G----CT-GAGGTG-A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464942 13 -  31847680 taca--g----at-caggt--a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225870 14 -   7148211 TACC--A----AG-AAGGTG-A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   122913 14 -    149072 TCCA--A----AT-AAGTTG-A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49573 14 -    132029 TACA--G----CT-GAGGTG-A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5669 14 -     16345 TACA--G----CT-GAGGTG-A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11552 14 +     22201 TACA--G----CT-GAGGTG-A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409889 14 -  22158432 TACA--G----CT-GAGGTG-A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21952 14 -     54323 TACA--G----CT-GAGGTG-A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194317 13 +   9404916 tata--g----at-aaggt--a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93631064 14 + 196305487 TCCA--G----AT-GAGGTG-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              453 14 +      2758 TCCA--G----AT-GAGGTG-A
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559344 14 - 199412804 TCCA--G----AT-GAGGTG-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447725 13 +   2017862 TACA--G----AT-CAGGT--A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434756 13 -    630418 CATA--G----AG-AAGGTG--
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12747 13 +    150152 TATA--G----AG-GAGGTG--
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 1
s Orcinus_orca.KB316932.1                                  8095140 14 +  10937097 TACC--A----AG-AAGGTG-A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35380 13 +    559221 tata--g----at-aaggt--a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_85057                         22589 14 -     23432 TCCA--G----AT-GAGGTG-C
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347154 14 +   1103335 TCCA--G----AT-GAGGTG-C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402736 13 -  44047080 TATA--G----AG-AAGGTG--
i Ovis_aries.CM001607.2                                  C 0 I 1
s Ovis_canadensis.OviCan_scaffold_67953                       3255 13 +     17875 TATA--G----AG-AAGGTG--
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 1
s Pan_troglodytes.CM009242.2                               1467781 14 - 189151597 TATA--G----CT-GAGTTG-A
i Pan_troglodytes.CM009242.2                             C 0 I 27
s Panthera_onca.PanOnc_flattened_line_3271                   20470 14 -    230217 TACA--G----GT-AAGGTG-A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18457796 14 -  18783137 TACA--G----GT-AAGGTG-A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968524 14 +   8748460 TACA--G----GT-AAGATG-A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614179 13 +   2937107 TAGA--G----AG-AAGGTG--
i Pantholops_hodgsonii.KE114653.1                        C 0 I 1
s Papio_anubis.CM001495.2                                   239195 14 - 183742232 TACC--G----CT-GAGGTG-A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5662 14 +     21308 TACC--G----CT-GAGGTG-A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286699 14 -  20919399 TACC--G----CT-GAGGTG-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18315 14 -     27687 TACC--G----CT-GAGGTG-A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11451 14 +     16796 TACC--G----CT-GAGGTG-A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18261 14 -     23640 TACC--G----CT-GAGGTG-A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11387 14 +     78924 taca--g----aa-aaggTG-G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21153 14 +     31479 TCCA--G----AT-GAGGTG-A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13524 14 -     24908 TCCA--G----AT-GAGGTG-A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              10998 14 -     15039 TACC--A----AG-AAGGTG-A
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            5081 14 +      7560 TACC--G----CT-GAGGTG-A
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60788 14 -     63152 TACC--G----CT-GAGGTG-A
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43387 14 +     45295 TACC--G----CT-GAGGTG-A
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1066 14 +      5735 TACC--G----CT-GAGGTG-A
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45912 14 +     46691 TACA--G----AT-AAGCTG-A
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61267 14 +    207309 TACA--G----CT-GAGGTG-A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2387 14 -     25401 TACA--G----CT-GAGGTG-A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28102 14 +     58159 TACA--G----CT-GAGGTG-A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28378 14 +     63561 TACA--G----CT-GAGGTG-A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28141 14 +     51148 TACA--G----CT-GAGGTG-A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553134 14 -   4542175 TACA--G----CT-GAGGTG-A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28125 14 +     51125 TACA--G----CT-GAGGTG-A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3082 14 -      8168 TACC--A----AG-AAGGTG-A
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4553 14 +     39866 CACA--G----CT-GAGGGG-A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39041 14 -     87950 CACA--G----CT-GAGGGG-A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39434 14 -     88961 CACA--G----CT-GAGGGG-A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4134 14 -     39403 CACA--G----CT-GAGGGG-A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39087 14 +     87928 CACA--G----CT-GAGGGG-A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4131 14 -     60166 CACA--G----CT-GAGGGG-A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11067 14 -     67232 CACA--G----CT-GAGGGG-A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38983 14 -     90634 CACA--G----CT-GAGGGG-A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40451 14 +     89403 CACA--G----CT-GAGGGG-A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173398 14 - 189387572 TACA--G----CT-GAGGTG-A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188396 14 -   9816681 TACA--G----CT-GAGGTG-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23567 14 +     69807 TACC--G----CT-GAGGTG-A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40762 14 -     80239 TACC--G----CT-GAGGTG-A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8270 14 +     14086 tacg--g----ag-aaagga-a
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979767 14 +   4620579 TACA--G----AT-GAGGTG-A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562344 14 -   2598838 TACA--G----AT-GAGGTG-A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_162402                            942 14 -      1093 taca--g----at-gaggTG-A
i Propithecus_coronatus.k141_162402                      I 30 N 0
s Propithecus_diadema.k141_153680                              586 14 -     11706 taca--g----at-gaggTG-A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4321 14 -     30655 taca--g----at-gaggTG-A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30646 14 +     46564 taca--g----at-gaggTG-A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90937 14 -     98465 taca--g----at-gaggTG-A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4559 14 +     35169 taca--g----at-gaggTG-A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47784 14 -     66298 TACA--A----AT-ACGTTG-A
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4615 13 -     10349 TACA--G----AT-AAGGT--A
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 C 0
s Pteropus_alecto.KB030862.1                               5836702 14 -  28871421 tTCA--T----AT-ATGGTG-C
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533277 14 -   4952924 tCCA--T----AT-ATGGCA-C
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095348 14 +  38429054 TACA--G----GT-AAGGTG-A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             21728 13 +     91421 AAGC--A----CA-G-GGCT-C
i Pygathrix_cinerea.k141_1153803                         C 0 I 1225
s Pygathrix_nigripes_b.ctg100                                  148222 13 -   7812017 AAGC--A----CA-G-GGCT-C
i Pygathrix_nigripes_b.ctg100                               C 0 I 1223
s Pygathrix_nigripes_a.k141_215492                              2598 13 +     72585 AAGC--A----CA-G-GGCT-C
i Pygathrix_nigripes_a.k141_215492                         C 0 I 1225
s Rhinolophus_sinicus.LVEH01000134.1                       2909343 14 +   3329780 taca--g----at-aagTTG-A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24785 14 +     27361 TACC--G----CT-GAGGTG-A
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118144 14 + 195417433 TACC--G----CT-GAGGTG-A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232393 14 -   7961872 TACC--G----CT-GAGGTG-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70747 14 -    116970 tCCA--T----AT-ACGGTG-C
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                263 14 +     27962 TACA--G----CT-GAGGTG-A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              263 14 +      6077 TACA--G----CT-GAGGTG-A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              284 14 +      5971 TACA--G----GT-GAGGTG-A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                336 14 +      5932 TACA--G----CT-GAGGTG-A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               487 14 -      2099 TACA--G----CT-GAGGTG-A
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387522 14 - 209938924 TACA--G----CT-GAGGTG-A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 287 14 +      5979 TACA--G----CT-CAGGTG-A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                                662 14 -      4301 TACA--G----CT-GAGGTG-A
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6322 10 +     16473 ---A--G----AG-AAGGTG--
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 1
s Sapajus_apella.ctg103                                     234753 14 +   5703754 TCCG--G----CT-GAGGGG-A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4343 14 +     21866 TCCG--G----CT-GAGGGG-A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112447 14 +    313613 TA--CAG----AT-AATGTG-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21275 14 +     27374 TACC--G----CT-GAGGTG-A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24790 14 +     58920 TACC--G----CT-GAGGTG-A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11287 14 -     45317 TACC--G----CT-GAGGTG-A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18944 14 -     42441 TACC--G----CT-GAGGTG-A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21626 14 -     29113 TACC--G----CT-GAGGTG-A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24698 14 -     48123 TACC--G----CT-GAGGTG-A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854423 12 -   1910179 TA----G----AA-AAGGTG-A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855568 13 +   3870691 TATA--G----AT-TAACTG--
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525              3041 13 -     97271 taca--g----at-aaggt--a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121009 14 +    196729 taca--g----at-aaggTG-A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6639745 14 +  69701581 TACG--G----AG-AAGGTG-A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386870 14 +   1523678 TACA--G----CT-GAGGTG-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                 921 14 -      2009 TACA--G----AT-AAGGCA-A
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187515 14 +    199430 TGCA--G----ATAA-GATG-A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101470 14 -    539355 TGCA--G----ATAA-GATG-A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                3524 17 +      6850 TATC--A-TCCCT-GAAGTG-A
i Tarsius_lariang.k141_1780720                           I 290 C 0
s Tarsius_wallacei.k141_226975                                3609 17 +     20590 TATC--ACTC-TT-GAAATG-A
i Tarsius_wallacei.k141_226975                           I 290 C 0
s Theropithecus_gelada.CM009954.1                           349180 14 - 186847797 TACC--G----CT-GAGGTG-A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16309  4 -     31044 -----------------GTG-A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475593 14 -    610378 CACA--A----AT-CGGCTG-A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16839 14 +     26378 TACC--G----CT-GAGGTG-A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29520 14 -     78344 TACC--G----CT-GAGGTG-A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16160 14 +     25722 TACC--G----CT-GAGGTG-A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24383 14 -     62838 TACC--G----CT-GAGGTG-A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24502 14 +     46913 TACC--G----CT-GAGGTG-A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5310 14 -     28527 TACC--G----CT-GAGGTG-A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26322 14 -     64340 TACC--G----CT-GAGGTG-A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24359 14 -     63452 TACC--G----CT-GAGGTG-A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5801 14 +     22490 TACC--G----CT-GAGGTG-A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3421 14 +      4141 TACC--G----CT-GAGGTG-A
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6227 14 -     13050 TACC--G----CT-GAGGTG-A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251462 14 -   6242583 TACC--G----CT-GAGGTG-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57196 14 +     59866 TACC--G----CT-GAGGTG-A
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6478923 14 -  10818551 taca--g----at-aaagTG-A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB338335.1                                  283 14 -       332 TACA--G----AT-AAGATG-A
i Tupaia_chinensis.KB338335.1                            C 0 I 11
s Tupaia_tana.TupTan_flattened_line_394                       3440 14 -     70247 TACA--G----AT-AAGACG-A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 11
s Tursiops_truncatus.MRVK01000835.1                       17359879 14 -  33153633 TACC--A----AG-AAGGTG-A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103660 14 -    105689 TA--CAG----AG-AATATG-A
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177665 13 +   5085361 tata--g----at-gaggt--a
i Ursus_maritimus.KK499267.1                             C 0 I 13
s Varecia_rubra.k141_787544                                  21397 14 -     30710 taca--g----at-gaggTG-A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20305 14 -    147434 taca--g----at-gaggTG-A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74966 14 +   5488506 taca--g----ag-aaggCG-A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101064 13 -    112863 TATA--G----AT-AAGGT--A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162470 13 -    224448 AATA--G----AT-AAAGTG--
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732         24945 13 -     86975 TACA--G----AT-CAGGT--A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_2431392            375  7 +       382 TACC--A----AG---------
i Ziphius_cavirostris.ZipCav_flattened_line_2431392      C 0 N 0
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tragulus_javanicus.TraJav_scaffold_3462                   171951 36 -    200418 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51692  1 +     55069 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Colobus_guereza.LG01                                      374268  0 - 200372422 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        555 27 +     36723 CC-AAGT--CCTC---CT-----CC-TCAGAC-CC-CCA-CC
s Acinonyx_jubatus.LLWD01001279.1                           809107 29 +   1699592 CTGAGGT--AAAT---CT--C--C--TCAGGA-CTGGTG-CC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411001 16 +  29979442 atGTGGT--AAATCTTCT------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 13
s Ailurus_fulgens.LNAC01001112.1                            211916 16 +    347723 GTGAGGT--AAATCTCCT------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 13
s Allenopithecus_nigroviridis.k141_3755588                   43866 27 +     53615 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39681 27 +     44087 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68600 27 -     84148 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40823 27 -     78289 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40271 27 +     55831 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38712 27 -     64179 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20355 27 -     24835 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37338 27 +     45454 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43037 27 +     70886 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5164 27 +     30854 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29303 27 +     42133 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583812 29 +   2318259 TTGCAGT--CAGT---CT-----C-CTcaggt-ctgcta-cc
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172576 29 -    412891 ATGAGGG--AGTT---TT-----C-ATCAGGA-CTGCT-GCC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48911 29 -     68529 ATGAGGT--CAGT---CT-----C-CTCAGGT-CTGCTC-CC
i Antilocapra_americana.AntAmePen_scaffold_21030         I 1 C 0
s Aotus_azarae.k141_118258                                   47112 27 -     65372 CC-AAGT--CCCC---GC-----GC-TCAGAA-CC-CCA-CC
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40860 27 +     43593 CC-AAGT--CCCT---GC-----AC-TCAGAA-CC-CCA-CC
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668870 27 +   5030052 CC-AAGT--CCCC---GT-----GC-TCAGAA-CC-CCA-CC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20512 27 -     23494 CC-AAGT--CCCC---AT-----GC-TCAGAA-CC-CCA-CC
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5648 27 +      8415 CC-AAGT--CCCC---GT-----GC-TCAGAA-CC-CCA-CC
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11822 28 -     32367 ATGAAGT--AAGT---C------CC-C-ATGAACTACTA-CT
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 1 I 5
s Arctocebus_calabarensis.k141_1364444                       15746 29 -     45910 ATGGGGT--TCGT---CT-----CC-CCAGGC-CTGCAA-CC
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   416 29 -     15198 ATGAGGC--AGGT---TT-----C-GTCAGGA-CTGCT-GCC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271098 27 +  21539123 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7269 27 +     48076 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2403 27 -     28759 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29955 27 +     44353 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45330 27 -     71267 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19386 27 -     33135 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2493 29 +     11645 ATGAGGT--ACAT---TT-----CC-TCCGGA-CTGCAA-CC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2495 29 -     19611 ATGAGGT--ACAT---TT-----CC-TTCGGA-CTGCAA-CC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955644 29 -  23207421 ATGAGGT--AAAT---CT-----C-CTcagga-ctgcta-cc
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 3
s Balaenoptera_bonaerensis.DF507193.1                         2852 29 -      4711 ATGAGGT--AAAT---CT-----C-CTcagga-ctgcta-cc
i Balaenoptera_bonaerensis.DF507193.1                    C 0 I 3
s Beatragus_hunteri.BeaHun_scaffold_7278                     84809 27 +    124022 ATGTGGT--CAGT---CT-----C---caggt-ctgcta-cc
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 1 C 0
s Bison_bison.KN261452.1                                     20340 29 +    288883 ATGAGGT--CAGT---CT-----C-CTcaggt-ctgcta-cc
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003047.1                                  20354727 29 +  48749331 ATGAGGT--CAGT---CT-----C-CTCAGGT-CTGCTA-CC
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                      753295 29 +   1948126 ATGAGGT--CAGT---CT-----C-CTcaggt-ctgcta-cc
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000203.6                                   27543434 29 -  45695690 ATGAGGT--CAGT---CT-----C-CTcaggt-ctgcta-cc
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               1528456 29 -   4408762 ATGAGGT--CAGT---CT-----C-CTCAGGT-CTGCTA-CC
i Bubalus_bubalis.KI419123.1                             I 1 I 2
s Cacajao_ayresi.k141_96119                                   4289 27 +     28062 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-GCA-CC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39584 27 -     91139 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-GCA-CC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17109 27 +     95584 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-GCA-CC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17022 27 +    119600 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-GCA-CC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6529 27 +     18648 CC-AAGT--CCCC---GT-----CA-TCAGAA-CC-CCA-CC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6205 27 -     13885 CC-AAGT--CCCC---AT-----TG-TCAGAA-CC-CCA-CC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14891 27 +     17162 CC-AAGT--CCCC---GT-----CG-TCAGAA-CC-CCA-CC
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449847 27 + 189096842 CC-AAGT--CCCC---AT-----CG-TCAGAA-CC-CCA-CC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16140 27 -     18408 CC-AAGT--CCCC---AT-----CG-TCAGAA-CC-CCA-CC
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629642 14 +  17673402 GTGAGAT--AAAT---CG-----C------------------
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           4663928 14 +   7040546 GTGAGAT--AAAT---CG-----C------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                 1207588 14 +   1652518 GTGAGAT--AAAT---CT-----C------------------
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           42501444 13 +  60362399 ATTAGGT--AAAT---CT------------------------
i CanFam4.chr16                                          C 0 I 9
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5074 13 -     23171 attagGT--AAAT---CT------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 9
s Canis_lupus_dingo.QKWQ01000480.1                          218435 13 +   9314153 attagGT--AAAT---CT------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 9
s Canis_lupus_familiaris.chr16                            41611560 13 +  59632846 ATTAGGT--AAAT---CT------------------------
i Canis_lupus_familiaris.chr16                           C 0 I 9
s Canis_lupus_orion.HG994398.1                            45103130 13 -  63665305 attagGT--AAAT---CT------------------------
i Canis_lupus_orion.HG994398.1                           C 0 I 9
s Capra_aegagrus.CM003241.1                               27407523 29 -  46296322 TTGCAGT--TAGT---CT-----C-CTcaagt-ctgcta-cg
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 26589796 29 +  44709034 TTGCAGT--TAGT---CT-----C-CTcaagt-ctgcta-cg
i Capra_hircus.CM004588.1                                I 1 C 0
s Carlito_syrichta.NW_007259797.1                           265932 29 +    496798 TGGAGGA--CTGC---TC-----CC-TCTAGA-CTGTGA-CG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                462 29 +      5315 ATGAGGT--AGAT---TT-----C-GTCAGGA-CTGCT-GCC
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75296 29 -    217609 ATGTGGT--AAAT---CT-----C-CTcagga-ctgctg-cc
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1425 27 -     12580 CC-AAGT--CCCC---GT-----CG-TCAGAA-CC-CCA-CC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39311 27 +     53515 CC-AAGT--CCCC---GT-----CG-TCAGAA-CC-CCA-CC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367543 27 -  26074798 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCG-CC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4432 27 -     34880 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCG-CC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63527 27 -     89041 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCG-CC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        14212 29 -     50533 TGGAGGC--CTGC---TT-----CC-TCTAGA-CTGCGA-CC
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488507 29 -  27778364 GTGAGGT--AAAC---CT---G-C--Tcagga-ctacta-cc
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15340 29 +     27315 GTGAGGT--AAAC---CT---G-C--Tcagga-ctacta-cc
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137026 27 -   4669795 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40767 27 +     47900 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40599 27 -     44860 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40581 27 -    148725 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23638 27 -     40656 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Cercopithecus_ascanius.k141_3120866                    C 0 I 2
s Cercopithecus_cephus.k141_4183004                           3575 27 +     20796 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7830 27 -     17524 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23522 24 -     34525 CC-AAGT-----C---CT-----CC-TCAGTC-CC-CCA-CC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8247 16 -     25376 -----------------T-----CC-TCAGTC-CC-CCA-CC
i Cercopithecus_lowei.k141_2101310                       I 5 C 0
s Cercopithecus_albogularis.ctg5                                  360795 27 -  39242232 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266552 16 +  21565898 -----------------T-----CC-TCAGTC-CC-CCA-CC
i Cercopithecus_mona.ctg39                               I 5 C 0
s Cercopithecus_neglectus.k141_858615                        27993 27 -     45857 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23784 27 -     32606 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27512 27 +     27662 CC-AAGT--CCTC---CT-----CC-TCAGCC-CC-CCA-CC
i Cercopithecus_petaurista.k141_1716667                  C 0 I 2
s Cercopithecus_pogonias.k141_6079                           21483 27 +     70610 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18348 27 +     36323 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9326 29 -     19938 ATTAGGT--AAAA---AT-----CC-Tcaggg-tggcca-cc
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 1
s Cheirogaleus_major.k141_666340                             26922 15 -     33796 ------------------------C-TCAAGA-CTGTGA-CC
i Cheirogaleus_major.k141_666340                         I 11 C 0
s Cheirogaleus_medius.k141_759766                             1117 15 -     15404 ------------------------C-TCAGGA-CTGTGA-CT
i Cheirogaleus_medius.k141_759766                        I 11 C 0
s Cheracebus_lucifer.k141_2312002                             5390 27 -     32913 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15803 27 -     40346 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16067 27 +    216457 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15846 27 +     39636 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCA-CC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            279 27 +      5346 CC-GAGT--TCCC---GT-----CG-TCAGAA-CC-CCA-CC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38931 27 -    112038 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-GCA-CC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4503 27 +     34062 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-GCA-CC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339246 27 +  18827391 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5855 27 -     44032 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300572 27 - 135778131 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405103 27 -   2368649 CC-AAGT--CCTC---CT-----CT-TCAGTC-CC-CCA-CC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374268 21 - 200372422 ---------CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              4987 27 -      6605 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803398 28 +  53390261 ATGAGAG--A-------GATCC-CC-ATGAGA-CTG-CA-GT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8830 13 +     10921 ATGAAGT--AAAT---CT------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 I 9
s Cryptoprocta_ferox.CryFer_flattened_line_16129               344 29 +     87169 CTGAGGT--GAAT---CT--C--C--Tcagga-ctggcg-cc
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2105532 29 -   2246927 ATTAGGT--AAAA---CT-----CC-Tcagaa-cggcca-cc
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Daubentonia_madagascariensis.ctg71                        288938 29 +  12879189 ATGAGGT--GCAT---GT-----CC-TCAGGA-CTGCAC-CC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18623972 29 -  35494412 ATGAGGT--AAAT---CT-----C-CTcagga-ctgcta-cc
i Delphinapterus_leucas.KZ290073.1                       C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660794 29 -   1390856 GTGAGGT--AAAT---CT---G-C--Tcagga-ctgcta-cc
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135586 29 -    198055 GTGAGGT--AAAC---CT---G-C--Tcagga-ctacta-cc
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2171 29 +     19438 ATGAGGT--AAAT---CT-----C-CTCAGGA-CTGCTG-GC
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238198 29 -    607251 ATGAGAT--CAGT---CT-----C-CTcaggt-ctgcta-cc
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906469 16 +  41312741 atgagGT--AAATCTCCT------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 16
s Eptesicus_fuscus.JH977646.1                             12573732 29 +  14770903 ATGAGGT--AAAC---CT-----C-GCTGgga-ctattg-cc
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037762 29 -   4378816 ATGAAGT--AAAT---CT--C--C--TCAGGA-CTTCAG-CC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371696 29 +  39960074 ATGAAGT--AAAT---CT--C--C--TCAGGA-CTTCAG-CC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408482 29 -    498745 ATGAAGT--AAAT---CT--C--C--TCAGGA-CTTCAG-CC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258802 27 +  21539334 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63523 29 -    133382 ATGAGGT--AAAT---CT-----C-CTcagga-ctgcta-cc
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_118172             3739 29 +      7672 ATGAGGT--AAAT---CT-----C-CTcagga-ctgcta-cc
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 I 3
s Eulemur_albifrons.k141_51491                               11898 29 -     24895 ATGAGGT--ACAT---CT-----CC-TCAGGT-CTGTGA-CC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39610 29 -     70999 ATGAGGT--ACAT---CT-----CC-TCAGGT-CTGTGA-CC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83570 29 +    112731 ATGAGGT--ACAT---CT-----CC-TCAGGT-CTGTGA-CC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40142 29 +     68309 ATGAGGT--ACAT---CT-----CC-TCAGGT-CTGTGA-CC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50467 29 -     65740 ATGAGGT--ACAT---CT-----CC-TCAGGT-CTGTGA-CC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21097 29 -     75513 ATGAGGT--ACAT---CT-----CC-TCAGGT-CTGTGA-CC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45290 29 -     97555 ATGAGGT--ACAT---CT-----CC-TCAGGT-CTGTGA-CC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2015 29 +     30972 ATGAGGT--ACAT---CT-----CC-TCAGGT-CTGTGA-CC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39740 29 -     52037 ATGAGGT--ACAT---CT-----CC-TCAGGT-CTGTGA-CC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56141 29 -    111500 ATGAGGT--ACAT---CT-----CC-TCAGGT-CTGTGA-CC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242766 29 - 206538554 CTGAGGT--AAAT---CT--C--C--Tcagga-ctggtg-cc
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112548 29 - 205367284 CTGAGGT--AAAT---CT--C--C--Tcagga-ctggtg-cc
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23896 29 -     30238 CTGAGGT--AAAT---CT--C--C--TCAGGA-CTGGTG-CC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     119327 29 -    137831 ATGGGGT--CCAT---CT-----CC-CCAGGC-CTGCAA-CC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             2867 29 +     22493 ATGGGGT--CCAT---CT-----CC-CCAGGC-CTGCAA-CC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            15060 29 -     32986 ATGGGGT--TCAT---CT-----CC-CCAGGC-CTGCAA-CC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15112 29 +     18121 ATGAGGT--AAGT---CA-----AC-Tcagga-ctgcta-cc
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89877 29 -     95226 ATGAGGT--CAAT---CT-----C-CTcaggt-ctgctc-cc
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 1 C 0
s Gorilla_beringei.k141_3358147                                906 27 -      8343 CC-AAGT--CCTC---CT-----CC-TCAGAC-CC-CCA-CC
i Gorilla_beringei.k141_3358147                          I 14 I 22
s Gorilla_gorilla.LT578341.1                                250406 27 - 186649187 CC-AAGT--CCTC---CT-----CC-TCAGAC-CC-cca-cc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11831 29 -     40692 ATGAGGT--ACAT---CT-----CC-TCAGGA-CTGTGA-CC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33233 29 +     49394 ATGAGGT--ACAT---CT-----CC-TCAGGA-CTGTGA-CC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58101 29 -     66874 ATGAGGT--ACAT---CT-----CC-TCAGGA-CTGTGA-CC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          6978 29 -     42923 ATGAGGT--ACAT---CT-----CC-TCAGGA-CTGTGA-CC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         13974 29 -     53142 ATGAGGT--ACAT---CT-----CC-TCAGGA-CTGTGA-CC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26660 29 -    327341 CTGAGGT--GAAT---CT--C--C--Tcagga-caggtg-cc
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7630 29 +     48891 TTGCGGT--CAGT---CT-----C-CTcaggt-ctgcta-cc
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11114 29 +     12639 ATGACGT--AGTT---CT-----CC-TCAAGG-CTGCCT-CT
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 I 147
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6229 29 -     36432 atgaagt--aaat---ct-----c-ctGagga-ctgcta-cc
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546061 29 -   1711038 atgaaat--aaat---cT-----C-CTcagga-ctgctg-cc
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45370 29 +     49977 ATGAAAT--AAAT---CT-----C-CTcagga-ctgctg-cc
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138302 27 -    630532 TC-AAGT--ACTC---TT-----CC-TCAGAC-CC-CCA-CC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65339 29 +     83186 CTGAGGT--AAAT---CT--C--C--TCAGGA-CTGGTG-CC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               1335 27 +     12352 TC-AAGT--ACTC---CT-----CC-TCAGAC-CC-CCA-CC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8518 27 +     55766 TC-AAGT--ACTC---CT-----CC-TCAGAC-CC-CCA-CC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047857 27 + 191637585 TC-AAGT--ACTC---CT-----CC-TCAGAC-CC-CCA-CC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797189 27 +  11177569 TC-AAGT--ACTC---CT-----CC-TCAGAC-CC-CCA-CC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375205 28 +   7955117 ATGAGGT--AAGT---TT-----CT-T-ATGAACTACCT--G
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 I 5
s Indri_indri.k141_1634743                                     249 29 -      1784 ATGAGGT--ACAT---TT-----CC-TCAGGA-CTGCAA-CC
i Indri_indri.k141_1634743                               C 0 I 155
s Inia_geoffrensis.IniGeo_flattened_line_69447                1759 29 -     16823 ATGTGGT--AAAT---CT-----C-CTcagga-ctgcta-tc
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_3970                 64248 29 -     97402 ATGAGGT--AAAT---CT-----C-CTcagga-ctgcta-cc
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 3
s Lagothrix_lagothricha.k141_246028                          39645 27 +    110728 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-ACA-CC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    28474 29 -     49555 ATGAGGA--AAAC---CT-----C-CCTGGGC-CTGCTG-CC
i Lasiurus_borealis.LasBor_scaffold_26245                I 167 I 389
s Lemur_catta.scaffold_24                                 14756623 29 +  30322482 ATGAGGT--ACAT---CT-----CC-TCAGGA-CTGTGA-CC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         350 27 -     13097 CC-AAGT--CCCT---GT-----CA-TCAGAA-CC-ACA-CC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            301 27 +      5940 CC-AAGT--CCCT---GT-----AA-TCAGAA-CC-ACA-CC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6554 27 -     11567 CC-AAGT--CCCC---GT-----CG-TCAGAA-CC-CCA-CC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7935 27 -     12945 CC-AAGT--CCCC---GT-----CG-TCAGAA-CC-CCA-CC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5285 15 +     29618 ------------------------C-TCAGGA-CGGTGA-CC
i Lepilemur_ankaranensis.k141_567626                     I 13 C 0
s Lepilemur_dorsalis.k141_387009                              5282 15 +     31569 ------------------------C-TCAGGA-CGGTGA-CC
i Lepilemur_dorsalis.k141_387009                         I 11 C 0
s Lepilemur_ruficaudatus.k141_330196                          5288 15 +     24756 ------------------------C-TCAGGA-CGGTGA-CC
i Lepilemur_ruficaudatus.k141_330196                     I 11 C 0
s Lepilemur_septentrionalis.k141_360456                       5287 15 +     16388 ------------------------C-TCAGGA-CGGTGA-CC
i Lepilemur_septentrionalis.k141_360456                  I 11 C 0
s Leptonychotes_weddellii.KB714746.1                        809558 16 -   3914936 atgagGT--AAATCTCCT------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 13
s Lipotes_vexillifer.KE559953.1                             333282 29 +    662738 ATGAGGT--AAAT---CT-----C-CTcagga-ctgcta-cc
i Lipotes_vexillifer.KE559953.1                          C 0 I 3
s Lophocebus_aterrimus.ctg367                               328982 27 -   1826925 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2305 29 +     19643 ATAGGGT--TCGT---CT-----CC-CCAGGC-CTGCAA-CC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5035963 29 -   6120653 ATAGGGT--TCGT---CT-----CC-CCAGGC-CTGCAA-CC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39076274 29 +  43346337 ATGAGGT--AAAT---CT-----CC-TCAGGG-CTGCCT-CC
i Loxodonta_africana.GL010049.1                          C 0 I 168
s Lycaon_pictus.CM007581.1                                41610715 13 +  59628241 attagGT--AAAT---CT------------------------
i Lycaon_pictus.CM007581.1                               C 0 I 9
s Macaca_arctoides.k141_1757516                              41262 27 -     61512 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368890 27 -  60120075 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21210 27 +     30207 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18313 27 -     24934 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21097 27 +     30527 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32286 27 -     50087 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42024 27 +     51645 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410598 27 - 187317192 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395481 27 +  25927173 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44613 27 -     62418 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21300 27 +     24253 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41057 27 +     59329 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266889 27 +    668171 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18235 27 +     21031 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31967 27 +     33478 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219244 28 -    270270 ATGAGGT--AAAT---CT-----C-CTCAAGA-CT-CTG-GC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318365 27 +  24302211 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353197 27 -    752769 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             669992 28 -    737560 ATGAGGT--AAAT---CT--C--C--Tcagga--tgctg-cc
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217286 28 +    317179 ATGAGGT--AAAT---CT--C--C--Tcagga--tgctg-cc
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7489298 28 +  40650429 ATGAGGT--aagt---ct-----cc-t-atgaactatct--g
i Marmota_marmota.CZRN01000018.1                         I 1 I 5
s Megaderma_lyra.MegLyr_scaffold_4542                       146306 23 +    207569 ATGAAGT--AGAT---CT-----C-CTCAGGA-CT-------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_19308             14483 16 -     74585 ATGAGGT--AAATCTCCT------------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 13
s Mesoplodon_bidens.MesBid_scaffold_6114                     79826 29 +     93471 ATGAGGT--AAAT---CT-----C-CTcagga-ctgcta-cc
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 3
s Mico_argentatus.k141_582562                                 6313 27 +     17804 CC-AAGT--CCCC---GT-----CA-TCAGAA-CC-CCA-CC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7086 27 -     12984 CC-AAGT--CCCC---GT-----CA-TCAGAA-CC-CCA-CC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15048 27 -     26561 CC-AAGT--CCCC---GT-----CA-TCAGAA-CC-CCA-CC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980885 15 +  93316391 ------------------------C-TCAGGA-CTGTGA-TC
i Microcebus_murinus.CM007674.1                          I 11 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180551 29 +    200668 ATGAGGT--AGAT---TT-----C-ATCAGGA-CTGCT-GCC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         18355 27 -     27822 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     48746 15 -     62432 ------------------------C-TCAGGA-CTGTGA-CC
i Mirza_zaza.k141_766280                                 I 11 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4568 16 +     27589 ATGAGGT--AAATCACCT------------------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 13
s Monodon_monoceros.MonMon_M_scaffold_103                   351715 29 +    437263 ATGAGGT--AAAT---CT-----C-CTcagga-ctgcta-cc
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174721 29 +    366855 ATGAGGC--AGAT---TC-----C-ATCAGGA-CTGCT-GCC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22782 29 -     82753 ATGAGGT--CAGT---CT-----C-CCcaggt-ctgcta-cc
i Moschus_moschiferus.MosMos_scaffold_13123              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14429 29 -     63510 CTGAGGT--GACT---GT--C--C--Tcagga-caggtg-cc
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          33655 29 +     47283 ATGAGGC--AAAT---TT-----C-CCCGCGA-CTATtg-cc
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343524 16 +  14710649 atgagGT--AAATCTCCT------------------------
i Mustela_putorius.JH418006.1                            C 0 I 16
s Myotis_brandtii.KE162005.1                               9788088 29 +  10118263 GTGAGGT--AAAT---CT-----C-CCTGGGA-CTGTTG-Tc
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378499 29 +   6019432 GTGAGGT--AAAT---CT-----C-CCTGgga-ctgtgg-tc
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               378319 29 +   4330536 ATGAGGT--AAAT---CT-----C-CCTGGGA-CTGTTG-Tc
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        2038 29 +      3929 GTGAGGT--AAAT---CT-----T-CCTGGGA-CTGTTG-Tc
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116066 29 +    130748 ACCAGGT--CAAA---TT-----TC-Tcaggg-ttgcca-ca
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 1
s Nasalis_larvatus.k141_1350636                              24641 27 +     34575 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464955 16 -  31847680 atgagGT--AAAtctcct------------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 11
s Neophocaena_asiaeorientalis.KZ687982.1                   1225884 29 -   7148211 ATGAGGT--AAAT---CT-----C-CTcagga-ctgcta-cc
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_7894                   122927 28 -    149072 GTGAGGT--AGAG---TT-----C-ATCAGGA-CTGCT--CC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49587 27 -    132029 CC-AAGT--TCTC---CT-----CC-TCAGAC-CC-CCA-CC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5683 27 -     16345 CC-AAGT--TCTC---CT-----CC-TCAGAC-CC-CCA-CC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11566 27 +     22201 CC-AAGT--TCTC---CT-----CC-TCAGAC-CC-CCA-CC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409903 27 -  22158432 CC-AAGT--TCTC---CT-----CC-TCAGAC-CC-CCA-CC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21966 27 -     54323 CC-AAGT--TCTC---CT-----CC-TCAGAC-CC-CCA-CC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194330 13 +   9404916 attagGT--AAAT---CT------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 9
s Nycticebus_bengalensis.LG01                             93631078 29 + 196305487 ATGGGGT--TCAT---CT-----CC-CCAGGC-CTGCAC-CC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              467 29 +      2758 ATGGGGT--TCAT---CT-----CC-CCAGGC-CTGCAC-CC
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559358 29 - 199412804 ATGGGGT--TCAT---CT-----CC-CCAGGC-CTGCAG-CC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447738 16 +   2017862 ATGAGGT--AAATCTCCT------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 13
s Odocoileus_virginianus.KZ100018.1                         434769 29 -    630418 ATGAGGT--CAGT---CT-----C-CTcaggt-ctgcta-cc
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12761 29 +    150152 ATGACGT--CAGT---CT-----C-CTcaggt-ctgctc-cc
i Okapia_johnstoni.LVCL01S0005463.1                      I 1 C 0
s Orcinus_orca.KB316932.1                                  8095154 29 +  10937097 ATGAGGT--AAAT---CT-----C-CTcagga-ctgcta-cc
i Orcinus_orca.KB316932.1                                C 0 I 3
s Otocyon_megalotis.JAEUCK010005147.1                        35393 13 +    559221 attagGT--AAAT---CT------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 9
s Otolemur_crassicaudatus.k141_85057                         22603 29 -     23432 GTGGGGT--TCAT---CT-----CC-CCAGGC-CTGCAA-CC
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347168 29 +   1103335 ATGGGGT--TCAT---CT-----CC-CCAGGC-CTGCAA-CC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402750 29 -  44047080 TTGCGGT--CAGT---CT-----C-CTcaggt-ctgcta-cc
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3269 29 +     17875 TTGCGGT--CAGT---CT-----C-CTcaggt-ctgcta-cc
i Ovis_canadensis.OviCan_scaffold_67953                  I 1 C 0
s Pan_troglodytes.KZ622849.1                                 28879 27 -    110857 CC-AAGT--CCTC---CT-----CC-TCAGAC-CC-cca-cc
i Pan_troglodytes.KZ622849.1                             I 44 I 22
s Panthera_onca.PanOnc_flattened_line_3271                   20484 29 -    230217 CTGAGGT--AAAT---CT--C--C--Tcagga-ctggtg-cc
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18457810 29 -  18783137 CTGAGGT--AAAT---CT--C--C--TCAGGA-CTGGTG-CC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968538 29 +   8748460 CTGAGGT--AAAT---CT--C--C--TCAGGA-CTGGTG-CC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614193 29 +   2937107 TTGCGGT--CAGT---CT-----C-CTcagat-ctgcta-cc
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                   239209 27 - 183742232 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5676 27 +     21308 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-GC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286713 27 -  20919399 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18329 27 -     27687 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11465 27 +     16796 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18275 27 -     23640 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11401 29 +     78924 TTGAGAT--AAAT---CT--C--C--Tcagga-ctggtg-cc
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21167 29 +     31479 ATGAGGT--TTGT---CT-----CC-CCAGGC-CTGCAA-CC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13538 29 -     24908 ATGGGGT--TTGT---CT-----CC-CCAGGC-CTGCAA-CC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11012 29 -     15039 ATGAGGT--AAAT---CT-----C-CTcagga-ctgcta-cc
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 I 3
s Piliocolobus_badius.k141_2495623                            5095 27 +      7560 CC-AAGT--CCTC---CT-----CC-TCAGCC-CC-CCA-CC
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60802 27 -     63152 CC-AAGT--CCTC---CT-----CC-TCAGCC-CC-CCA-CC
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43401 27 +     45295 CC-AAGT--CCTC---CT-----CC-TCAGCC-CC-CCA-CC
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1080 27 +      5735 CC-AAGt--cctc---ct-----cc-tcagcc-cc-ccA-CC
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45926 29 +     46691 ATGAGGT--AAAT---CT-----C-CCTGGGA-CTGCTG-CC
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61281 27 +    207309 CC-AAGT--CGCC---GT-----CC-TCAGAA-CC-CCA-CC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2401 27 -     25401 CC-AAGT--CGCC---GT-----CC-TCAGAA-CC-CCA-CC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28116 27 +     58159 CC-AAGT--CGCC---GT-----CC-TCAGAA-CC-CCA-CC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28392 27 +     63561 CC-AAGT--CGCC---GT-----CC-TCAGAA-CC-CCA-CC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28155 27 +     51148 CC-AAGT--CGCC---GT-----CC-TCAGAA-CC-CCA-CC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553148 27 -   4542175 CC-AAGT--CGCC---GT-----CC-TCAGAA-CC-CCA-CC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28139 27 +     51125 CC-AAGT--CGCC---AT-----CC-TCAGAA-CC-CCA-CC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3096 29 -      8168 AAGAGGT--AAAT---CT-----C-CTcagga-ctgcta-cc
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 I 3
s Plecturocebus_bernhardi.k141_2549090                        4567 19 +     39866 CC-AAGT--CCCC---GT-----CC-TCAGA-----------
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 7
s Plecturocebus_caligatus.k141_1382851                       39055 19 -     87950 CC-AAGT--CCCC---GT-----CC-TCAGA-----------
i Plecturocebus_caligatus.k141_1382851                   C 0 I 7
s Plecturocebus_cinerascens.k141_1164729                     39448 19 -     88961 CC-AAGT--CCCC---GT-----CC-TCAGA-----------
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 7
s Plecturocebus_cupreus.k141_2351393                          4148 19 -     39403 CC-AAGT--CCCC---GT-----CC-TCAGA-----------
i Plecturocebus_cupreus.k141_2351393                     C 0 I 7
s Plecturocebus_dubius.k141_1058799                          39101 19 +     87928 CC-AAGT--CCCC---GT-----CC-TCAGA-----------
i Plecturocebus_dubius.k141_1058799                      C 0 I 7
s Plecturocebus_grovesi.k141_2013005                          4145 19 -     60166 CC-AAGT--CCCC---GT-----CC-TCAGA-----------
i Plecturocebus_grovesi.k141_2013005                     C 0 I 7
s Plecturocebus_hoffmannsi.k141_3303950                      11081 19 -     67232 CC-AAGT--CCCC---GT-----CC-TCAGA-----------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 7
s Plecturocebus_miltoni.k141_349282                          38997 19 -     90634 CC-AAGT--CCCC---GT-----CC-TCAGA-----------
i Plecturocebus_miltoni.k141_349282                      C 0 I 7
s Plecturocebus_moloch.k141_1031110                          40465 19 +     89403 CC-AAGT--CCCC---GT-----CC-TCAGA-----------
i Plecturocebus_moloch.k141_1031110                      C 0 I 7
s Pongo_abelii.CM009266.2                                   173412 27 - 189387572 CC-AAGT--CCTC---CT-----CC-TCAGAC-CC-cca-cc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188410 27 -   9816681 CC-AAGT--CCTC---CT-----CC-TCAGAC-CC-CCA-CC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23581 27 +     69807 CC-AAGT--CCTC---TT-----CC-TCAGTC-CC-CCA-CC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40776 27 -     80239 CC-AAGT--CCTC---TT-----CC-TCAGTC-CC-CCA-CC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8284 29 +     14086 atGATGT--AGCT---CT-----CC-TCAAGG-CTGCCT-CC
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 I 147
s Prolemur_simus.MPIZ01000396.1                            1979781 29 +   4620579 ATGAGGT--ACAT---CT-----CC-TCAGGA-CTGTGA-CC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562358 29 -   2598838 ATGAGGT--ACAT---TT-----CC-TCAGGA-CTGCAA-CC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                              4 29 -      7103 ATGAGGT--ACAT---TT-----CC-TCAGGA-CTGTAA-CC
i Propithecus_coronatus.k141_209299                      N 0 C 0
s Propithecus_diadema.k141_153680                              600 29 -     11706 ATGAGGT--ACAT---TT-----CC-TCAGGA-CTACAA-CT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4335 29 -     30655 ATGAGGT--ACAT---TT-----CC-TCAGGA-CTACAA-CT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30660 29 +     46564 ATGAGGT--ACAT---TT-----CC-TCAGGA-CTACAA-CC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       90951 29 -     98465 ATGAGGT--ACAT---TT-----CC-TCAGGA-CTGCAA-CC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4573 29 +     35169 ATGAGGT--ACAT---TT-----CC-TCAGGA-CTACAA-CT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47798 29 -     66298 ATGGGCT--AGAT---TT-----C-ATCAGGA-CTGCT-GCC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4628 16 -     10349 ATGAGGT--AAATCTCCT------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 I 16
s Pteropus_alecto.KB030862.1                               5836716 29 -  28871421 ATGAGGT--AAAT---CT-----T-CTCAGGA-CTGCTG-GC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533291 29 -   4952924 ATGAGGT--AAAT---CT-----T-CTCAGGA-CTGCTG-GC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095362 29 +  38429054 CTGAGGT--AAAT---CT--C--C--TCAGGA-CTGGTG-CC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             22966 27 +     91421 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Pygathrix_cinerea.k141_1153803                         I 1225 C 0
s Pygathrix_nigripes_b.ctg100                                  149458 27 -   7812017 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Pygathrix_nigripes_b.ctg100                               I 1223 C 0
s Pygathrix_nigripes_a.k141_215492                              3836 27 +     72585 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Pygathrix_nigripes_a.k141_215492                         I 1225 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51693 26 +     55069 ---AGGT--CAGT---CC-----C-CTcaggt-ctgcta-cc
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909357 29 +   3329780 ACGAAGT--AAAT---CT-----C-CTcagga-ctgctg-cc
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24799 27 +     27361 CC-GAGT--CTTC---CT-----CC-TCAGTC-CC-CCA-CC
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118158 27 + 195417433 CC-GAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232407 27 -   7961872 CC-GAGT--CTTC---CT-----CC-TCAGTC-CC-CCA-CC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70761 29 -    116970 ACGAGGT--AAAC---CT-----T-CTCAGGA-CTGCTG-GC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                277 27 +     27962 CC-GAGT--TCCC---GT-----CG-TCAGAA-CC-CCA-CC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              277 27 +      6077 CT-GAGT--CCCC---AT-----CG-TCAGAA-CC-ACA-CC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              298 27 +      5971 CC-GAGT--CCCC---GT-----CA-TCAGAA-CC-ACA-CC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                350 27 +      5932 CC-GAGT--CCCC---GT-----CA-TCAGAA-CC-ACA-CC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               501 27 -      2099 CC-GAGT--CCCC---GT-----CA-TCGGAA-CC-ACA-CC
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387536 27 - 209938924 CC-GAGT--TCCC---GT-----CG-TCAGAA-CC-CCA-CC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 301 27 +      5979 CC-GAGT--CCCC---GT-----CA-TCGGAA-CC-ACA-CC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                                676 27 -      4301 CC-GAGT--CCCT---GT-----CG-TCAGAA-CC-ACA-CC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6333 29 +     16473 ATGCGGT--CAGT---CT-----C-CTcaggt-ctgcta-cc
i Saiga_tatarica.SaiTat_scaffold_39512                   I 1 C 0
s Sapajus_apella.ctg103                                     234767 27 +   5703754 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCG-CC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4357 27 +     21866 CC-AAGT--CCCC---GT-----CC-TCAGAA-CC-CCG-CC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112461 28 +    313613 ATGAGAT--A-------GATCC-TT-ACTAAA-CTG-CG-GC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21289 27 +     27374 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24804 27 +     58920 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11301 27 -     45317 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18958 27 -     42441 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21640 27 -     29113 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24712 27 -     48123 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854435 25 -   1910179 ATGAGTA--A-------A-----CC-TTAAGA-Cggctg-cc
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1855582 28 +   3870691 GTGAGGT--AAGT---TT-----CC-T-ATGAACTACCT--G
i Spermophilus_dauricus.KZ294078.1                       I 1 I 5
s Spilogale_gracilis.SpiGra_flattened_line_13525              3054 16 -     97271 atgagGT--AAATCTCCT------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 13
s Suricata_suricatta.SurSur_flattened_line_6629             121023 29 +    196729 CTGAGGT--GAAT---CT--C--C--Tcagga-caggtg-cc
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6639759 29 +  69701581 ATGTGGT--AAAT---CT-----C-CTcagga-ctgctg-cc
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386884 27 +   1523678 TC-AAGT--CCTC---CT-----CC-TCAGAC-CC-CCA-CC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                 935 29 -      2009 ATCTGGT--CACA---TT-----TC-Tcaggg-ctgcca-ca
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_7432                      187529 29 +    199430 ATGAGGT--AAAT---CT--C--C--Tcagga-ctgctg-cc
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101484 29 -    539355 ATGAGGT--AAAT---CT--C--C--Tcagga-ctgctg-cc
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                3541 29 +      6850 TGGAGGC--CTAC---TT-----CC-TCTAGA-CTGCGA-CC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3626 29 +     20590 TAGAGGC--CCAC---CT-----CC-TCTGGC-CTGCAA-CT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349194 27 - 186847797 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16313 29 -     31044 ATTAAGT--GAAA---AT-----CC-Tcagga-cggcca-cc
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_294                    475607 29 -    610378 ATGAGGT--AGTT---TT-----C-ATCAGGA-CTGCT-ACC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16853 27 +     26378 CC-AGGT--CCTC---CC-----CC-TCAGGC-CC-CCA-CC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29534 27 -     78344 TC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16174 27 +     25722 CC-AGGT--CCTC---CC-----CC-TCAGGC-CC-CCA-CC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24397 27 -     62838 CC-AAGT--CCTC---CC-----CC-TCAGGC-CC-CCA-CC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24516 27 +     46913 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5324 27 -     28527 CC-AGGT--CCTC---CC-----CC-TCAGGC-CC-CCA-CC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26336 27 -     64340 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24373 27 -     63452 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5815 27 +     22490 CC-AAGT--CCTC---CC-----CC-TCAGGC-CC-CCA-CC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3435 27 +      4141 CC-AAAT--CCTC---CC-----CC-TCAGGC-CC-CCA-CC
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6241 27 -     13050 CC-AAAT--CCTC---CC-----CC-TCAGGC-CC-CCA-CC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251476 27 -   6242583 CC-AGGT--CCTC---CC-----CC-TCAGTC-CC-CCA-CC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57210 27 +     59866 CC-AAGT--CCTC---CT-----CC-TCAGTC-CC-CCA-CC
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   171987  7 -    200418 ----------------------------------tgctg-cc
i Tragulus_javanicus.TraJav_scaffold_3462                I 36 C 0
s Trichechus_manatus.JH594705.1                            6478937 29 -  10818551 ACGAGGT--AAAT---CT-----CC-TCAGGG-CTGCCA-CA
i Trichechus_manatus.JH594705.1                          C 0 I 186
s Tupaia_chinensis.KB338335.1                                  308 15 -       332 ------------------------C-TCAGGA-CTGCTA-CC
i Tupaia_chinensis.KB338335.1                            I 11 n 11
s Tupaia_tana.TupTan_flattened_line_394                       3465 15 -     70247 ------------------------C-TCAGGA-CTGCTA-CC
i Tupaia_tana.TupTan_flattened_line_394                  I 11 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359893 29 -  33153633 ATGAGGT--AAAT---CT-----C-CTcagga-ctgcta-cc
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_7153                   103674 28 -    105689 ATGAATT--A-------T-TGCTCT-GTTAGA-CTG-TG-CC
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177691  7 +   5085361 ---------------------------cagga-ct-------
i Ursus_maritimus.KK499267.1                             I 13 I 6
s Varecia_rubra.k141_787544                                  21411 29 -     30710 ATGAGGT--GCAT---CT-----CC-TCTGGA-CTGTGA-CC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20319 29 -    147434 ATGAGGT--GTAT---CT-----CC-TCAGGA-CTGTGG-CC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   74980 14 +   5488506 GTGAGAT--AAAT---CG-----C------------------
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_12041                101077 13 -    112863 ATTAGGT--AAAT---CT------------------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 9
s Xerus_inauris.XerIna_scaffold_2302                        162484 28 -    224448 ATGAGGT--AAGT---TT-----CC-T-ATGAACTACAT--G
i Xerus_inauris.XerIna_scaffold_2302                     I 1 I 5
s Zalophus_californianus.ZalCal_flattened_line_17732         24958 16 -     86975 ATGAGGT--AAATCTCCT------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 13
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        582 22 +     36723 TGT--------G----------TGT------GTGCA---C-AT---------C-GTGT--CT
s Acinonyx_jubatus.LLWD01001279.1                           809136 19 +   1699592 TGT--------G----------T--T-G---gtgca---c-at---------t-gtc-----
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 4
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411030 18 +  29979442 tgt--------g----------t------ttgtgta---c-at---------t-gt------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 13 I 3
s Ailurus_fulgens.LNAC01001112.1                            211945 19 +    347723 tgt--------g----------t------ttgtgca---c-at---------t-gtc-----
i Ailurus_fulgens.LNAC01001112.1                         I 13 I 4
s Allenopithecus_nigroviridis.k141_3755588                   43893 20 +     53615 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39708 20 +     44087 TGT--------G----------T--------GTGCA---C-AT---------C---GTGTCT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68627 20 -     84148 TGC--------A----------T--------GTGCA---C-AT---------C-GTGT--CT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40850 20 -     78289 TGC--------A----------T--------GTGCA---C-AT---------T-GTGT--CT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40298 20 +     55831 TGC--------A----------T--------GTGCA---C-AT---------C-GTGT--CT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38739 20 -     64179 TGC--------A----------T--------GTGCA---C-AT---------C-GTGT--CT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20382 20 -     24835 TGC--------A----------T--------GTGCA---C-AT---------C-GTGT--CT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37365 20 +     45454 TGC--------A----------T--------GTGCA---C-AT---------C-GTGT--CT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43064 20 +     70886 TGC--------A----------T--------GTGCA---C-AT---------C-GTGT--CT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5191 20 +     30854 TGC--------A----------T--------GTGCA---C-AT---------C-GTGT--CT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29330 20 +     42133 TGC--------A----------T--------GTGCA---C-AT---------C-GTGT--CT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583841 19 +   2318259 tgt--------g----------g------ctgtgtg---c-at---------t-gtg-----
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_1412                      172605 19 -    412891 TCT--------G----------T------CTGAGCA---C-AT---------T-GTG-----
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 4
s Antilocapra_americana.AntAmePen_scaffold_21030             48940 19 -     68529 TGT--------G----------T--T----TGtgtg---c-ac---------t-gtg-----
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 4
s Aotus_azarae.k141_118258                                   47139 20 -     65372 TGT--------G----------T--------GTGCA---G-AT---------C-GTGT--CT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40887 20 +     43593 TGT--------G----------T--------GTGCA---G-AT---------C-ATGT--CT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668897 20 +   5030052 TGT--------G----------T--------GTGCA---G-AT---------C-GTGT--CT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20539 20 -     23494 TGT--------G----------T--------GTGCA---G-AT---------C-GTGT--CT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5675 20 +      8415 TGT--------G----------T--------GTGCA---G-AT---------C-GTGT--CT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11855 10 -     32367 -------------------------------Gtgca---c-ac---------t-c-------
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 5 C 0
s Arctocebus_calabarensis.k141_1364444                       15775 22 -     45910 TGT--------G----------T------CCATGCA---C-GA---------T-GAGT--CT
i Arctocebus_calabarensis.k141_1364444                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   445 19 -     15198 TCT--------G----------T--T----TGAGCA---C-AG---------T-GTG-----
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 4
s Ateles_geoffroyi_b.tarseq_1536                               271125 20 +  21539123 TGC--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7296 20 +     48076 TGC--------A----------T--------GTGCA---C-GT---------C-GTGT--CT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2430 20 -     28759 TGC--------A----------T--------GTGCA---C-AT---------C-GTGT--CT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              29982 20 +     44353 TGC--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45357 20 -     71267 TGC--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19413 20 -     33135 TGC--------A----------T--------GTGCA---C-AT---------C-GTGT--CT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2522 22 +     11645 TGT--------A----------T--T---C-ATGCA---C-AT---------C-GTGT--CT
i Avahi_laniger.k141_2756659                             C 0 I 1
s Avahi_peyrierasi.k141_1823318                               2524 22 -     19611 TGT--------A----------T--T---C-ATGCA---C-AT---------C-GTGT--CT
i Avahi_peyrierasi.k141_1823318                          C 0 I 1
s Balaenoptera_acutorostrata.KI537508.1                    7955676 15 -  23207421 ----------------------t------ttgtgca---c-at---------t-gtg-----
i Balaenoptera_acutorostrata.KI537508.1                  I 3 I 4
s Balaenoptera_bonaerensis.DF507193.1                         2884 15 -      4711 ----------------------t------ttgtgca---c-at---------t-gtg-----
i Balaenoptera_bonaerensis.DF507193.1                    I 3 I 4
s Beatragus_hunteri.BeaHun_scaffold_7278                     84836 19 +    124022 tgt--------g----------g------ctgcgtg---c-at---------t-gtg-----
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 4
s Bison_bison.KN261452.1                                     20369 19 +    288883 tgt--------g----------t------ctgtgtg---c-at---------t-gtg-----
i Bison_bison.KN261452.1                                 C 0 I 4
s Bos_indicus.CM003047.1                                  20354756 19 +  48749331 TGT--------G----------T------CTGtgtg---c-at---------t-gtg-----
i Bos_indicus.CM003047.1                                 C 0 I 4
s Bos_mutus.JH880303.1                                      753324 19 +   1948126 tgt--------g----------t------ctgtgtg---c-at---------t-gtg-----
i Bos_mutus.JH880303.1                                   C 0 I 4
s Bos_taurus.CM000203.6                                   27543463 19 -  45695690 tgt--------g----------t------ctgtgtg---c-at---------t-gtg-----
i Bos_taurus.CM000203.6                                  C 0 I 4
s Bubalus_bubalis.KI419123.1                               1528487 19 -   4408762 CGT--------G----------T--T----TGtgtg---c-at---------t-gtg-----
i Bubalus_bubalis.KI419123.1                             I 2 I 4
s Cacajao_ayresi.k141_96119                                   4316 20 +     28062 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39611 20 -     91139 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17136 20 +     95584 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17049 20 +    119600 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6556 20 +     18648 TGT--------G----------T--------GTGCA---C-AT---------C-ATGC--CT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6232 20 -     13885 CGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14918 20 +     17162 TGT--------G----------T--------GTGCA---C-AT---------C-GTGC--CT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449874 20 + 189096842 TGT--------G----------T--------GTGCA---C-AT---------C-GTGC--CT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16167 20 -     18408 TGT--------G----------T--------GTGCA---C-AT---------C-GTGC--CT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629657 19 +  17673402 TAT--------G----------T------Ctgcgca---c-at---------t-gtg-----
i Camelus_bactrianus.KN276810.1                          I 1 I 4
s Camelus_dromedarius.KN272107.1                           4663943 19 +   7040546 TAT--------G----------T------Ctgcgca---t-at---------t-gtg-----
i Camelus_dromedarius.KN272107.1                         I 1 I 4
s Camelus_ferus.KB017975.1                                 1207603 19 +   1652518 TAT--------G----------T------Ctgcgca---c-at---------t-gtg-----
i Camelus_ferus.KB017975.1                               I 1 I 4
s CanFam4.chr16                                           42501466 19 +  60362399 TGT--------G----------T--T----TGACTA---C-AT---------T-GTC-----
i CanFam4.chr16                                          I 9 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5096 19 -     23171 tgt--------g----------t------ttgacta---c-at---------t-gtc-----
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 9 I 4
s Canis_lupus_dingo.QKWQ01000480.1                          218457 19 +   9314153 tgt--------g----------t------ttgacta---c-at---------t-gtc-----
i Canis_lupus_dingo.QKWQ01000480.1                       I 9 I 4
s Canis_lupus_familiaris.chr16                            41611582 19 +  59632846 TGT--------G----------T--T----TGACTA---C-AT---------T-GTC-----
i Canis_lupus_familiaris.chr16                           I 9 I 4
s Canis_lupus_orion.HG994398.1                            45103152 19 -  63665305 tgt--------g----------t------ttgacta---c-at---------t-gtc-----
i Canis_lupus_orion.HG994398.1                           I 9 I 4
s Capra_aegagrus.CM003241.1                               27407552 19 -  46296322 tgg--------a----------g------ctgtgtg---c-at---------t-gtg-----
i Capra_aegagrus.CM003241.1                              C 0 I 4
s Capra_hircus.CM004588.1                                 26589825 19 +  44709034 tgg--------a----------g------ctgtgtg---c-at---------t-gtg-----
i Capra_hircus.CM004588.1                                C 0 I 4
s Carlito_syrichta.NW_007259797.1                           265961 25 +    496798 TGT--------C----------G------CCCTCGA---A-AT-GAT-----A-GAGG--CC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                491 19 +      5315 TCT--------G----------T----G--TGAGCA---C-AC---------T-GTG-----
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                     75325 19 -    217609 cgt--------g----------t------ttgtgtg---c-at---------t-gtg-----
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 4
s Cebuella_niveiventris.k141_592277                           1452 20 -     12580 TGT--------G----------T--------GTGCA---C-AT---------C-GTGC--CT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39338 20 +     53515 TGT--------G----------T--------GTGCA---C-AT---------C-GTGC--CT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367570 20 -  26074798 GGT--------G----------T--------GTGCC---T-GT---------C-GTGT--CT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4459 20 -     34880 GGT--------G----------T--------GTGCC---T-GT---------C-GTGT--CT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63554 20 -     89041 GGT--------G----------T--------GTGCC---C-GT---------C-GTGT--CT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        14241 25 -     50533 TGT--------C----------G------CCCTCGA---A-AT-GA--C---A-GAGG--CC
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488536 19 -  27778364 tat--------g----------t------ttgtaca---c-at---------t-gtg-----
i Ceratotherium_simum.JH767749.1                         C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15369 19 +     27315 tat--------g----------t------ttgtaca---c-at---------t-gtg-----
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 4
s Cercocebus_atys.KQ010504.1                                137053 20 -   4669795 TGT--------G----------T--------GTACA---C-AT---------C-ATGT--CT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40794 20 +     47900 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40626 20 -     44860 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40608 20 -    148725 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23667 20 -     40656 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Cercopithecus_ascanius.k141_3120866                    I 2 C 0
s Cercopithecus_cephus.k141_4183004                           3602 20 +     20796 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7857 20 -     17524 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23546 20 -     34525 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8263 20 -     25376 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Cercopithecus_lowei.k141_2101310                       C 0 I 10
s Cercopithecus_albogularis.ctg5                                  360822 20 -  39242232 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266568 20 +  21565898 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28020 20 -     45857 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23811 20 -     32606 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27541 20 +     27662 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Cercopithecus_petaurista.k141_1716667                  I 2 C 0
s Cercopithecus_pogonias.k141_6079                           21510 20 +     70610 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18375 20 +     36323 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9356 18 -     19938 -ct--------a----------t------ttgtgca---g-gt---------t-gtg-----
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 1 I 4
s Cheirogaleus_major.k141_666340                             26937 22 -     33796 TGG--------A----------T--T---C-ATGCA---C-AT---------C-TTGT--CT
i Cheirogaleus_major.k141_666340                         C 0 I 1
s Cheirogaleus_medius.k141_759766                             1132 22 -     15404 TGC--------A----------T--T---C-ATGCA---C-AT---------C-TTGT--CT
i Cheirogaleus_medius.k141_759766                        C 0 I 1
s Cheracebus_lucifer.k141_2312002                             5417 20 -     32913 TGT--------G----------T--------GTGCA---C-AC---------C-GTGT--CT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15830 20 -     40346 TGT--------G----------T--------GTGCA---C-AC---------C-GTGT--CT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16094 20 +    216457 TGT--------G----------T--------GTGCA---C-AC---------C-GTGT--CT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15873 20 +     39636 TGT--------G----------T--------GTGCA---C-AC---------C-GTGT--CT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            306 20 +      5346 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38958 20 -    112038 TGT--------G----------T--------GTGCA---C-GT---------C-GTGT--CT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4530 20 +     34062 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339273 18 +  18827391 TGT--------G----------T--------GTGCA---C-AT---------C---GT--CT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5882 20 -     44032 TGT--------G----------T--------GTGCA---C-AT---------C---GTGTCT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300599 18 - 135778131 TGT--------G----------T--------GTGCA---C-AT---------C---GT--CT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405130 20 -   2368649 TGC--------G----------T--------GTGCG---C-AT---------C-GTGT--CT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374289 20 - 200372422 TGC--------G----------T--------GTGCG---C-AT---------C-GCGT--CT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5014 20 -      6605 TGC--------G----------T--------GTGCG---C-AT---------C-GTGT--CT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803426 32 +  53390261 C-T--------G----------T----GTTTGTGCCATGTTGTTTGTAAC-AT-GTT-----
i Condylura_cristata.JH655891.1                          C 0 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8852 29 +     10921 TGC--------CTACCGGTATGT--T----TGCGTA---C-AT---------T-GTG-----
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 9 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129               373 19 +     87169 tgt--------g----------t------ttgttca---c-at---------t-gtc-----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 4
s Dasypus_novemcinctus.JH564415.1                          2105562 18 -   2246927 -ct--------a----------t------ttgtata---g-gt---------t-gtg-----
i Dasypus_novemcinctus.JH564415.1                        I 1 I 4
s Daubentonia_madagascariensis.ctg71                        288967 21 +  12879189 TAC--------A----------T--T---C-CTGCA---C-GT---------T-GTGT---G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624004 15 -  35494412 ----------------------t------ttgtgca---c-at---------c-gtg-----
i Delphinapterus_leucas.KZ290073.1                       I 3 I 4
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660823 19 -   1390856 tat--------g----------t------ttgtaca---c-at---------t-gtg-----
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 4
s Diceros_bicornis.DicBicMic_scaffold_5955                  135615 19 -    198055 tat--------g----------t------ttgtaca---c-at---------t-gtg-----
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 4
s Eidolon_helvum.AWHC01266696.1                               2200 19 +     19438 TAT--------G----------T--T----TGTGTA---C-AC---------T-GCA-----
i Eidolon_helvum.AWHC01266696.1                          C 0 I 4
s Elaphurus_davidianus.JRFZ01104969.1                       238227 19 -    607251 tgt--------g----------t------ttatgtg---c-at---------c-gtg-----
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 4
s Enhydra_lutris.KZ291758.1                               24906501 12 +  41312741 -------------------------------gtgca---c-at---------t-gtc-----
i Enhydra_lutris.KZ291758.1                              I 16 I 4
s Eptesicus_fuscus.JH977646.1                             12573761 19 +  14770903 tat--------g----------t------ttgtgca---c-at---------c-atg-----
i Eptesicus_fuscus.JH977646.1                            C 0 I 4
s Equus_asinus.JREZ01000139.1                              3037791 19 -   4378816 TTT--------G----------T--T---C-GCACC---C-At---------t-gtg-----
i Equus_asinus.JREZ01000139.1                            C 0 I 4
s Equus_caballus.CM000403.2                               21371725 19 +  39960074 TTT--------G----------T--T---C-GCACC---C-At---------t-gtg-----
i Equus_caballus.CM000403.2                              C 0 I 4
s Equus_przewalskii.KK951119.1                              408511 19 -    498745 TTT--------G----------T--T---C-GCACC---C-At---------t-gtg-----
i Equus_przewalskii.KK951119.1                           C 0 I 4
s Erythrocebus_patas.Contig38                               258829 20 +  21539334 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63555 15 -    133382 ----------------------t------ttgtgca---c-at---------t-gtg-----
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 3 I 4
s Eubalaena_japonica.EubJap_flattened_line_118172             3771 15 +      7672 ----------------------t------ttgtgca---c-at---------t-gtg-----
i Eubalaena_japonica.EubJap_flattened_line_118172        I 3 I 4
s Eulemur_albifrons.k141_51491                               11927 22 -     24895 TGT--------A----------T--T---C-ACGCA---C-GC---------T-GTGT--CT
i Eulemur_albifrons.k141_51491                           C 0 I 1
s Eulemur_collaris.k141_601111                               39639 22 -     70999 TGT--------A----------T--T---C-ACGCA---C-GC---------T-GTGT--CT
i Eulemur_collaris.k141_601111                           C 0 I 1
s Eulemur_coronatus.k141_384460                              83599 22 +    112731 TGT--------A----------T--T---C-ACGCA---C-GC---------T-GTGT--CT
i Eulemur_coronatus.k141_384460                          C 0 I 1
s Eulemur_flavifrons.k141_433119                             40171 22 +     68309 TAT--------A----------T--T---C-ATGCA---C-GC---------T-GTGT--CT
i Eulemur_flavifrons.k141_433119                         C 0 I 1
s Eulemur_fulvus.k141_636316                                 50496 22 -     65740 TGT--------A----------T--T---C-ACGCA---C-GC---------T-GTGT--CT
i Eulemur_fulvus.k141_636316                             C 0 I 1
s Eulemur_macaco.k141_1562045                                21126 22 -     75513 TAT--------A----------T--T---C-ATGCA---C-GC---------T-GTGT--CT
i Eulemur_macaco.k141_1562045                            C 0 I 1
s Eulemur_mongoz.k141_232305                                 45319 22 -     97555 TGT--------A----------T--T---C-ACGCA---C-GC---------T-GTGT--CT
i Eulemur_mongoz.k141_232305                             C 0 I 1
s Eulemur_rubriventer.k141_1423786                            2044 22 +     30972 TGT--------A----------T--T---C-ACGCA---C-GC---------T-GTGT--CT
i Eulemur_rubriventer.k141_1423786                       C 0 I 1
s Eulemur_rufus.k141_514691                                  39769 22 -     52037 TGT--------A----------T--T---C-ACGCA---C-GC---------T-GTGT--CT
i Eulemur_rufus.k141_514691                              C 0 I 1
s Eulemur_sanfordi.k141_1122526                              56170 22 -    111500 TGT--------A----------T--T---C-ACGCA---C-GC---------T-GTGT--CT
i Eulemur_sanfordi.k141_1122526                          C 0 I 1
s Felis_catus.CM001381.2                                 186242795 19 - 206538554 tgt--------g----------t------tggtgca---c-at---------t-gtc-----
i Felis_catus.CM001381.2                                 C 0 I 4
s Felis_catus_fca126.CM031415.1                          185112577 19 - 205367284 tgt--------g----------t------tggtgca---c-at---------t-gtc-----
i Felis_catus_fca126.CM031415.1                          C 0 I 4
s Felis_nigripes.FelNig_flattened_line_31944                 23925 19 -     30238 TGT--------G----------T--T-G---GAgca---c-at---------t-gtc-----
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 4
s Galago_moholi.ctg3793                                     119356 22 -    137831 TGT--------G----------T------CCATGCA---C-AA---------T-GAGT--CT
i Galago_moholi.ctg3793                                  C 0 I 1
s Galago_senegalensis.k141_991736                             2896 22 +     22493 TGT--------G----------T------CCATGCA---C-AA---------T-GAGT--CT
i Galago_senegalensis.k141_991736                        C 0 I 1
s Galagoides_demidoff.k141_561628                            15089 22 -     32986 TGA--------G----------T------CCATGCA---C-TA---------T-GAGT--CT
i Galagoides_demidoff.k141_561628                        C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_74466               15141 22 +     18121 tgt--------g----------t------ttgtgca---c-at---------g-gtgt--ct
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 38
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89906 19 -     95226 tgt--------g----------t------ttgtggg---g-ac---------t-gtg-----
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 4
s Gorilla_beringei.k141_3358224                                939 22 -      1229 TGT--------G----------TGT------GTGCA---C-AT---------C-GTGT--CT
i Gorilla_beringei.k141_3358224                          I 27 I 56
s Gorilla_gorilla.LT578341.1                                250433 22 - 186649187 tgt--------g----------tgt------gtgca---c-at---------c-gTGT--CT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11860 22 -     40692 TGT--------A----------T--T---C-ACACG---C-GT---------T-GTGT--CT
i Hapalemur_alaotrensis.k141_330369                      C 0 I 1
s Hapalemur_gilberti.k141_646465                             33262 22 +     49394 TGT--------A----------T--T---C-ACACG---C-GT---------T-GTGT--CT
i Hapalemur_gilberti.k141_646465                         C 0 I 1
s Hapalemur_griseus.k141_763500                              58130 22 -     66874 TGT--------A----------T--T---C-ACACG---C-GT---------T-GTGT--CT
i Hapalemur_griseus.k141_763500                          C 0 I 1
s Hapalemur_meridionalis.k141_258450                          7007 22 -     42923 TGT--------A----------T--T---C-ACACG---C-GT---------T-GTGT--CT
i Hapalemur_meridionalis.k141_258450                     C 0 I 1
s Hapalemur_occidentalis.k141_578367                         14003 22 -     53142 TGT--------A----------T--T---C-ACACG---C-AT---------T-GTGT--CT
i Hapalemur_occidentalis.k141_578367                     C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585                26689 19 -    327341 tgt--------g----------t------ttgttca---c-at---------t-gtc-----
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 4
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7659 19 +     48891 tgt--------g----------g------cggtgtg---c-at---------t-gtg-----
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 4
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11290 12 +     12639 -gcgaccagggc----------t---------------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_99956            I 147 I 171
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6258 19 -     36432 tat--------g----------t------ttgtgca---c-at---------t-gtg-----
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 4
s Hipposideros_armiger.JXIK01000431.1                      1546090 19 -   1711038 tat--------g----------t------ttgtaca---c-at---------t-gtg-----
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 4
s Hipposideros_galeritus.HipGal_scaffold_23202               45399 19 +     49977 tat--------g----------t------ttgtaca---c-at---------t-gtg-----
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 4
s Hoolock_leuconedys.ctg274                                    138329 22 -    630532 TGT--------G----------TGT------GTGCA---C-AT---------C-GTGT--CT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65368 19 +     83186 TCT--------G----------T------ttgttca---c-at---------t-atc-----
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 4
s Hylobates_agilis.k141_1155965                               1362 22 +     12352 TGT--------G----------TGT------GTGCA---C-AT---------C-GTGT--CT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8545 22 +     55766 TGT--------G----------TGT------GTGCA---C-AT---------C-GTGT--CT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047884 22 + 191637585 TGT--------G----------TGT------GTGCA---C-AT---------C-GTGT--CT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797216 22 +  11177569 TGT--------G----------TGT------GTGCA---C-AT---------C-GTGT--CT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375238 10 +   7955117 -------------------------------atgca---c-ac---------t-g-------
i Ictidomys_tridecemlineatus.JH393364.1                  I 5 C 0
s Indri_indri.k141_4600452                                       9 22 -      1527 TGT--------A----------T--T---C-ATGCA---C-AT---------C-TTGT--CT
i Indri_indri.k141_4600452                               n 155 I 1
s Inia_geoffrensis.IniGeo_flattened_line_69447                1791 15 -     16823 ----------------------t------ttgtgca---c-at---------t-gtg-----
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 3 I 4
s Kogia_breviceps.KogBre_flattened_line_3970                 64280 15 -     97402 ----------------------t------ttgtgca---c-at---------t-gtg-----
i Kogia_breviceps.KogBre_flattened_line_3970             I 3 I 4
s Lagothrix_lagothricha.k141_246028                          39672 20 +    110728 TAC--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59270 18 -     65777 TGT--------G----------T--T----TGTGCA---C-A----------C-GTG-----
i Lasiurus_borealis.LasBor_scaffold_16567                I 29 I 4
s Lemur_catta.scaffold_24                                 14756652 22 +  30322482 TGT--------A----------T--T---C-ACACG---C-GT---------T-GTGT--CT
i Lemur_catta.scaffold_24                                C 0 I 1
s Leontocebus_fuscicollis.k141_2994775                         377 20 -     13097 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            328 20 +      5940 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6581 20 -     11567 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7962 20 -     12945 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5300 22 +     29618 TGT--------A----------T--T---C-ATGCA---C-AT---------T-GTGT--CT
i Lepilemur_ankaranensis.k141_567626                     C 0 I 1
s Lepilemur_dorsalis.k141_387009                              5297 22 +     31569 TGT--------A----------T--T---C-ATGCA---C-AT---------T-GTGT--CT
i Lepilemur_dorsalis.k141_387009                         C 0 I 1
s Lepilemur_ruficaudatus.k141_330196                          5303 22 +     24756 TGT--------A----------T--T---C-ATGCA---C-AT---------T-GTGT--CT
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 1
s Lepilemur_septentrionalis.k141_360456                       5302 22 +     16388 TGT--------A----------T--T---C-ATGCA---C-AT---------T-GTGT--CT
i Lepilemur_septentrionalis.k141_360456                  C 0 I 1
s Leptonychotes_weddellii.KB714746.1                        809587 19 -   3914936 tgt--------g----------t------ttgtgca---c-at---------t-gtc-----
i Leptonychotes_weddellii.KB714746.1                     I 13 I 4
s Lipotes_vexillifer.KE559953.1                             333314 15 +    662738 ----------------------t------ttgtgca---c-at---------t-gtg-----
i Lipotes_vexillifer.KE559953.1                          I 3 I 4
s Lophocebus_aterrimus.ctg367                               329009 20 -   1826925 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2334 21 +     19643 TGT--------G----------T------CCATGCA---T-GA---------T-G-GT--CT
i Loris_lydekkerianus.k141_2031736                       C 0 I 1
s Loris_tardigradus.ctg83                                  5035992 21 -   6120653 TGT--------G----------T------CCATGCA---T-GA---------T-G-GT--CT
i Loris_tardigradus.ctg83                                C 0 I 1
s Loxodonta_africana.GL010049.1                           39076471 12 +  43346337 -gtcactagggc----------t---------------------------------------
i Loxodonta_africana.GL010049.1                          I 168 I 861
s Lycaon_pictus.CM007581.1                                41610737 19 +  59628241 TGT--------G----------T--T----TGACTA---C-AT---------T-GTC-----
i Lycaon_pictus.CM007581.1                               I 9 I 4
s Macaca_arctoides.k141_1757516                              41289 20 -     61512 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368917 20 -  60120075 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21237 20 +     30207 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18340 20 -     24934 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21124 20 +     30527 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32313 20 -     50087 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42051 20 +     51645 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410625 20 - 187317192 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395508 20 +  25927173 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44640 20 -     62418 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21327 20 +     24253 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41084 20 +     59329 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266916 20 +    668171 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18262 20 +     21031 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               31994 20 +     33478 TGT--------G----------T--------GTGCA---C-AT---------C-ATGT--CT
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219272 19 -    270270 TGG--------G----------T--T----TGTGTA---C-AC---------T-GCA-----
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 4
s Mandrillus_leucophaeus.scaffold280                        318392 20 +  24302211 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353224 20 -    752769 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670020 18 -    737560 cat--------g----------t------ttgtaca---c--t---------t-gtg-----
i Manis_javanica.JSZB01003497.1                          C 0 I 4
s Manis_pentadactyla.KN006162.1                             217314 18 +    317179 cat--------g----------t------ttgtaca---c--t---------t-gtg-----
i Manis_pentadactyla.KN006162.1                          C 0 I 4
s Marmota_marmota.CZRN01000018.1                           7489331 10 +  40650429 -------------------------------atgca---c-ac---------t-g-------
i Marmota_marmota.CZRN01000018.1                         I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146331 19 +    207569 TGC--------C----------T----G--TGTGCA---G-GT---------A-GTG-----
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 I 4
s Mellivora_capensis.MelCap_flattened_line_19308             14512 19 -     74585 ttt--------g----------t------ttatgca---c-at---------t-gtc-----
i Mellivora_capensis.MelCap_flattened_line_19308         I 13 I 4
s Mesoplodon_bidens.MesBid_scaffold_6114                     79858 15 +     93471 ----------------------t------ttgtgca---c-at---------t-ttg-----
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 3 I 4
s Mico_argentatus.k141_582562                                 6340 20 +     17804 TGT--------G----------T--------GTGCA---C-AT---------C-ATGC--CT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7113 20 -     12984 TGT--------G----------T--------GTGCA---C-AT---------C-ATGC--CT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15075 20 -     26561 TGT--------G----------T--------GTGCA---C-AT---------C-ATGC--CT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980900 22 +  93316391 TGT--------A----------T--T---C-ATGCG---G-AT---------C-GTGT--CT
i Microcebus_murinus.CM007674.1                          C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_2233                180580 19 +    200668 TAT--------G----------T--T----TGAGCA---C-AT---------T-GTG-----
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 4
s Miopithecus_ogouensis.k141_1534655                         18382 20 -     27822 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4597 19 +     27589 tgt--------g----------t------ttgtgca---c-at---------t-gtc-----
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 13 I 4
s Mirza_zaza.k141_766280                                     48761 22 -     62432 CGT--------A----------T--T---C-ATGCA---C-AT---------C-GTGT--CT
i Mirza_zaza.k141_766280                                 C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_103                   351747 15 +    437263 ----------------------t------ttgtgca---c-at---------c-gtg-----
i Monodon_monoceros.MonMon_M_scaffold_103                I 3 I 4
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174750 19 +    366855 TGT--------G----------T--T----TGGCCA---C-AT---------T-GTA-----
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 4
s Moschus_moschiferus.MosMos_scaffold_13123                  22811 19 -     82753 tgt--------g----------t------tcgtgtg---c-ct---------t-gtg-----
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 4
s Mungos_mungo.MunMun_flattened_line_18455                   14458 19 -     63510 tgt--------g----------t------ttgttca---c-at---------t-gtc-----
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 4
s Murina_feae.MurFea_scaffold_17764                          33684 19 +     47283 tat--------g----------t------ttgtaca---c-at---------t-ctg-----
i Murina_feae.MurFea_scaffold_17764                      C 0 I 4
s Mustela_putorius.JH418006.1                             14343556 12 +  14710649 -------------------------------gtgca---c-at---------t-gtc-----
i Mustela_putorius.JH418006.1                            I 16 I 4
s Myotis_brandtii.KE162005.1                               9788117 19 +  10118263 cat--------g----------t------ttgtgca---c-at---------t-gtg-----
i Myotis_brandtii.KE162005.1                             C 0 I 4
s Myotis_davidii.KB100139.1                                4378528 19 +   6019432 cat--------g----------t------ttgtgca---c-at---------t-gtg-----
i Myotis_davidii.KB100139.1                              C 0 I 4
s Myotis_lucifugus.GL429869.1                               378348 19 +   4330536 cat--------g----------t------ttgtgca---c-at---------t-gtg-----
i Myotis_lucifugus.GL429869.1                            C 0 I 4
s Myotis_myotis.MyoMyo_scaffold_185951                        2067 19 +      3929 cat--------g----------t------ttgtgta---c-at---------t-gtg-----
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116096 18 +    130748 -at--------c----------t------ttgtgca---g-gt---------t-gtg-----
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 1 I 4
s Nasalis_larvatus.k141_1350636                              24668 20 +     34575 TGT--------G----------T--------ATGCA---C-AT---------C-GTGT--CT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11464982 19 -  31847680 tgT--------G----------T------ttgtgca---c-at---------t-gtc-----
i Neomonachus_schauinslandi.NINY01007730.1               I 11 I 4
s Neophocaena_asiaeorientalis.KZ687982.1                   1225916 15 -   7148211 ----------------------t------ttgtgca---c-at---------c-atg-----
i Neophocaena_asiaeorientalis.KZ687982.1                 I 3 I 4
s Noctilio_leporinus.NocLep_scaffold_7894                   122955 19 -    149072 TGT--------G----------T--T----TGAGTG---C-AA---------C-TTG-----
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 4
s Nomascus_annamensis.k141_1771965                           49614 22 -    132029 TGT--------G----------TGT------GTGCA---C-AT---------C-GTGT--GT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5710 22 -     16345 TGT--------G----------TGT------GTGCA---C-AT---------C-GTGT--GT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11593 22 +     22201 TGT--------G----------TGT------GTGCA---C-AT---------C-GTGT--GT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409930 22 -  22158432 TGT--------G----------TGT------GTGCA---C-AT---------C-GTGT--GT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  21993 22 -     54323 TGT--------G----------TGT------GTGCA---C-AT---------C-GTGT--GT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194352 19 +   9404916 tgt--------g----------t------ttgagta---c-at---------t-gtc-----
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 9 I 4
s Nycticebus_bengalensis.LG01                             93631107 21 + 196305487 TGT--------G----------T------CTGTGCA---C-GA---------T-G-GT--CT
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_8166032                              496 21 +      2758 TGT--------G----------T------CTGTGCA---C-GA---------T-G-GT--CT
i Nycticebus_coucang.k141_8166032                        C 0 I 57
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559387 21 - 199412804 TAT--------G----------T------CCATGCA---C-GA---------T-G-GT--CT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Odobenus_rosmarus.KB229312.1                             1447767 19 +   2017862 tgt--------g----------t------ttgtgca---c-at---------t-gtc-----
i Odobenus_rosmarus.KB229312.1                           I 13 I 4
s Odocoileus_virginianus.KZ100018.1                         434798 19 -    630418 tgt--------g----------t------ttatgtg---c-at---------c-gtg-----
i Odocoileus_virginianus.KZ100018.1                      C 0 I 4
s Okapia_johnstoni.LVCL01S0005463.1                          12790 19 +    150152 tgt--------g----------t------ttgtggg---g-ac---------t-gtg-----
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 4
s Orcinus_orca.KB316932.1                                  8095186 15 +  10937097 ----------------------t------ttgtgca---c-at---------t-gtg-----
i Orcinus_orca.KB316932.1                                I 3 I 4
s Otocyon_megalotis.JAEUCK010005147.1                        35415 19 +    559221 tgt--------g----------t------ttgagta---c-at---------t-gtc-----
i Otocyon_megalotis.JAEUCK010005147.1                    I 9 I 4
s Otolemur_crassicaudatus.k141_85057                         22632 22 -     23432 TGA--------G----------T------CCATGCA---C-AA---------T-GAGT--CT
i Otolemur_crassicaudatus.k141_85057                     C 0 I 1
s Otolemur_garnettii.GL873799.1                             347197 22 +   1103335 TGA--------G----------T------CCATGCA---C-AA---------T-GAGT--CT
i Otolemur_garnettii.GL873799.1                          C 0 I 1
s Ovis_aries.CM001607.2                                   26402779 19 -  44047080 tgt--------g----------g------ctgtgtg---c-at---------t-gtg-----
i Ovis_aries.CM001607.2                                  C 0 I 4
s Ovis_canadensis.OviCan_scaffold_67953                       3298 19 +     17875 tgt--------g----------g------ctgtgtg---c-at---------t-gtg-----
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 4
s Pan_troglodytes.CM009242.2                               1467822 22 - 189151597 tgt--------g----------tgt------gtgca---c-at---------c-gTGT--CT
i Pan_troglodytes.CM009242.2                             I 27 I 36
s Panthera_onca.PanOnc_flattened_line_3271                   20513 19 -    230217 tgt--------g----------t------tggtgca---c-at---------t-gtc-----
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 4
s Panthera_pardus.KV860321.1                              18457839 19 -  18783137 TGT--------G----------T--T-G---gtgca---c-at---------t-gtc-----
i Panthera_pardus.KV860321.1                             C 0 I 4
s Panthera_tigris.KE722367.1                               3968567 19 +   8748460 TGT--------G----------T--T-G---gtgca---c-at---------t-gtc-----
i Panthera_tigris.KE722367.1                             C 0 I 4
s Pantholops_hodgsonii.KE114653.1                          1614222 19 +   2937107 tgt--------g----------g------ctgtgtg---c-ac---------t-gtg-----
i Pantholops_hodgsonii.KE114653.1                        C 0 I 4
s Papio_anubis.CM001495.2                                   239236 20 - 183742232 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5703 20 +     21308 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286740 20 -  20919399 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18356 20 -     27687 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11492 20 +     16796 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18302 20 -     23640 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11430 19 +     78924 tgt--------g----------t------ttgtaca---c-at---------t-gtc-----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 4
s Perodicticus_ibeanus.k141_1921260                          21196 22 +     31479 TGT--------G----------T------CCATGCA---C-GA---------T-GAGT--CT
i Perodicticus_ibeanus.k141_1921260                      C 0 I 1
s Perodicticus_potto.k141_1854441                            13567 22 -     24908 TGT--------G----------T------CCATGCA---C-AA---------T-GAGT--CT
i Perodicticus_potto.k141_1854441                        C 0 I 1
s Phocoena_phocoena.PhoPho_flattened_line_46867              11044 15 -     15039 ----------------------t------ttgtgca---c-at---------c-atg-----
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 3 I 4
s Piliocolobus_badius.k141_2495623                            5122 20 +      7560 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60829 20 -     63152 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43428 20 +     45295 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1107 20 +      5735 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45955 19 +     46691 TAT--------G----------T--T----TGGGCA---C-AT---------C-ATG-----
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 I 4
s Pithecia_albicans.k141_1239476                             61308 20 +    207309 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2428 20 -     25401 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28143 20 +     58159 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28419 20 +     63561 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28182 20 +     51148 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553175 20 -   4542175 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28166 20 +     51125 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3128 15 -      8168 ----------------------t------ttgtgta---c-at---------t-gtg-----
i Platanista_gangetica.PlaMin_flattened_line_167872      I 3 I 4
s Plecturocebus_bernhardi.k141_2549090                        4593 20 +     39866 TGT--------G----------T--------GCGCA---C-AC---------C-GTGT--CT
i Plecturocebus_bernhardi.k141_2549090                   I 7 C 0
s Plecturocebus_caligatus.k141_1382851                       39081 20 -     87950 TGT--------G----------T--------GCGCA---C-AC---------C-TTGT--GT
i Plecturocebus_caligatus.k141_1382851                   I 7 C 0
s Plecturocebus_cinerascens.k141_1164729                     39474 20 -     88961 TGT--------G----------T--------GCGCA---C-AC---------C-GTGT--CT
i Plecturocebus_cinerascens.k141_1164729                 I 7 C 0
s Plecturocebus_cupreus.k141_2351393                          4174 20 -     39403 TGT--------G----------T--------GCGCA---C-AC---------C-TTGT--CT
i Plecturocebus_cupreus.k141_2351393                     I 7 C 0
s Plecturocebus_dubius.k141_1058799                          39127 20 +     87928 TGT--------G----------T--------GCGCA---C-AC---------C-TTGT--CT
i Plecturocebus_dubius.k141_1058799                      I 7 C 0
s Plecturocebus_grovesi.k141_2013005                          4171 20 -     60166 TGT--------G----------T--------GCGCA---C-AC---------C-GTGT--CT
i Plecturocebus_grovesi.k141_2013005                     I 7 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11107 20 -     67232 TGT--------G----------T--------GCGCA---C-AC---------C-GTGT--CT
i Plecturocebus_hoffmannsi.k141_3303950                  I 7 C 0
s Plecturocebus_miltoni.k141_349282                          39023 20 -     90634 TGT--------G----------T--------GCGCA---C-AC---------C-TTGT--CT
i Plecturocebus_miltoni.k141_349282                      I 7 C 0
s Plecturocebus_moloch.k141_1031110                          40491 20 +     89403 TGT--------G----------T--------GCGCA---C-AC---------C-GTGT--CT
i Plecturocebus_moloch.k141_1031110                      I 7 C 0
s Pongo_abelii.CM009266.2                                   173439 22 - 189387572 tgt--------g----------tgt------gtgca---c-at---------c-atGT--CT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188437 22 -   9816681 TGT--------G----------TGT------GTGCA---C-AT---------C-ATGT--CT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23608 20 +     69807 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40803 20 -     80239 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8460 12 +     14086 -gccaccagggc----------t---------------------------------------
i Procavia_capensis.ProCapCap_scaffold_121686            I 147 I 171
s Prolemur_simus.MPIZ01000396.1                            1979810 22 +   4620579 TGT--------A----------T--T---C-ACACG---C-GT---------T-GTGT--CT
i Prolemur_simus.MPIZ01000396.1                          C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                    1562387 22 -   2598838 TGT--------A----------T--T---C-ATGCA---C-AT---------C-ATGT--CT
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 1
s Propithecus_coronatus.k141_209299                             33 22 -      7103 TGT--------A----------T--T---C-ATGCA---T-AT---------C-ATGT--CT
i Propithecus_coronatus.k141_209299                      C 0 I 1
s Propithecus_diadema.k141_153680                              629 22 -     11706 TGT--------T----------T--T---C-ATGCC---C-AT---------C-ATGT--CT
i Propithecus_diadema.k141_153680                        C 0 I 1
s Propithecus_edwardsi.k141_635656                            4364 22 -     30655 TGT--------T----------T--T---C-ATGCC---C-AT---------C-ATGT--CT
i Propithecus_edwardsi.k141_635656                       C 0 I 1
s Propithecus_perrieri.k141_1496898                          30689 22 +     46564 TGT--------A----------T--T---C-ATGCA---C-AT---------C-ATGT--CT
i Propithecus_perrieri.k141_1496898                      C 0 I 1
s Propithecus_tattersalli.k141_1127767                       90980 22 -     98465 TGT--------A----------T--T---C-ATGCA---C-AT---------C-ATGT--CT
i Propithecus_tattersalli.k141_1127767                   C 0 I 1
s Propithecus_verreauxi.k141_1047036                          4602 22 +     35169 TGT--------A----------T--T---C-ATGCA---C-AT---------C-ATGT--CT
i Propithecus_verreauxi.k141_1047036                     C 0 I 1
s Pteronotus_parnellii.KE847780.1                            47827 19 -     66298 TGT--------G----------T--T-G---GAGCA---C-AT---------C-ATG-----
i Pteronotus_parnellii.KE847780.1                        C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4660 12 -     10349 -------------------------------gtgca---c-ac---------t-gtc-----
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 16 I 4
s Pteropus_alecto.KB030862.1                               5836745 19 -  28871421 TAT--------G----------T--T----TGTGTG---C-AC---------T-GCA-----
i Pteropus_alecto.KB030862.1                             C 0 I 4
s Pteropus_vampyrus.KN525825.1                             3533320 19 -   4952924 TAT--------G----------T--T----TGTGTG---C-AC---------T-GCA-----
i Pteropus_vampyrus.KN525825.1                           C 0 I 4
s Puma_concolor.QAVW01001104.1                            18095391 19 +  38429054 TGT--------G----------T--T-G---gtgca---c-at---------t-gtc-----
i Puma_concolor.QAVW01001104.1                           C 0 I 4
s Pygathrix_cinerea.k141_1153803                             22993 20 +     91421 TGT--------G----------T--------GTGCA---C-AT---------C-GTAT--CT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  149485 20 -   7812017 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              3863 20 +     72585 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51719 19 +     55069 tgt--------g----------t------ttatgtg---c-at---------c-gtg-----
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 4
s Rhinolophus_sinicus.LVEH01000134.1                       2909386 19 +   3329780 tat--------g----------t------ttgtaca---c-at---------t-gtg-----
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 4
s Rhinopithecus_bieti.k119_221883                            24826 20 +     27361 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118185 20 + 195417433 TAT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232434 20 -   7961872 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70790 19 -    116970 TAT--------G----------T--T----TGTGTA---C-AC---------T-GCA-----
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 4
s Saguinus_bicolor.k141_1429097                                304 20 +     27962 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              304 20 +      6077 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              325 20 +      5971 TGT--------G----------T--------GTGCA---C-GT---------C-GTGG--CT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                377 20 +      5932 TGT--------G----------T--------GTGCA---C-GT---------C-GTGG--CT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               528 20 -      2099 TGT--------G----------T--------GTGCA---C-GT---------C-GTGG--CT
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387563 20 - 209938924 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 328 20 +      5979 TGT--------G----------T--------GTGCA---C-GT---------C-GTGG--CT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                                703 20 -      4301 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6362 19 +     16473 tgt--------g----------t------ctgtgtg---c-at---------t-gtg-----
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 4
s Sapajus_apella.ctg103                                     234794 20 +   5703754 GGT--------G----------T--------GTACA---C-GT---------C-GTGT--CT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4384 20 +     21866 GGT--------G----------T--------GTGCA---C-GT---------C-GTGT--CT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112489 20 +    313613 C-T--------G----------T----GTTTGTAGACTGTGGT-------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 5
s Semnopithecus_entellus.k141_158471                         21316 20 +     27374 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24831 22 +     58920 TGT--------G----------T----G--TGTGCA---C-AT---------C-GTGT--CT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11328 20 -     45317 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            18985 20 -     42441 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21667 20 -     29113 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24739 20 -     48123 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854460 21 -   1910179 a-t--------g----------t------tcgggcacaca-gt---------t-atg-----
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 4
s Spermophilus_dauricus.KZ294078.1                         1855615 10 +   3870691 -------------------------------ATGCA---C-ac---------t-g-------
i Spermophilus_dauricus.KZ294078.1                       I 5 I 956
s Spilogale_gracilis.SpiGra_flattened_line_13525              3083 19 -     97271 tgt--------g----------t------ttgtgca---c-at---------t-gtc-----
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 13 I 4
s Suricata_suricatta.SurSur_flattened_line_6629             121052 19 +    196729 tgt--------g----------t------ttgttca---c-at---------t-gtc-----
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 4
s Sus_scrofa.CM000828.4                                    6639788 19 +  69701581 tat--------g----------t------ttgtgca---c-at---------a-gtg-----
i Sus_scrofa.CM000828.4                                  C 0 I 4
s Symphalangus_syndactylus.tarseq_199                       386911 22 +   1523678 TGT--------G----------TGT------GTGCA---C-AT---------C-GTGT--CT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                 965 18 -      2009 -at--------c----------t------ttgtgca---g-gt---------t-gtg-----
i Tamandua_tetradactyla.TamTet_scaffold_445853           I 1 I 4
s Tapirus_indicus.TapInd_scaffold_7432                      187558 19 +    199430 tat--------g----------t------ttgcgca---c-at---------t-atg-----
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 4
s Tapirus_terrestris.TapTer_scaffold_755                    101513 19 -    539355 tgt--------g----------t------ttgtgca---c-at---------t-atg-----
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 4
s Tarsius_lariang.k141_1780720                                3570 25 +      6850 TAT--------C----------A------CTCTTGA---A-AT-GAT-----A-GAGG--CC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3655 25 +     20590 TAT--------T----------A------CCCCTGA---A-GA-GAT-----G-GAGG--CC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349221 20 - 186847797 TGT--------G----------T--------GTGCA---C-AT---------T-GTGT--CT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16343 18 -     31044 -ct--------g----------t------ttgtgcg---g-gc---------t-gtg-----
i Tolypeutes_matacus.TolMat_scaffold_31955               I 1 I 4
s Tonatia_saurophila.TonSau_scaffold_294                    475636 19 -    610378 TAC--------G----------T--T----TGAGCA---C-AT---------T-GTA-----
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 4
s Trachypithecus_auratus.k141_1189070                        16880 20 +     26378 TGT--------G----------T--------GTGCA---C-AT---------C-GTGC--CT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29561 20 -     78344 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16201 20 +     25722 TGT--------G----------T--------GTGCA---C-AT---------C-GTGC--CT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24424 20 -     62838 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24543 20 +     46913 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5351 20 -     28527 TGT--------G----------T--------GTGCA---C-AT---------C-GTGC--CT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26363 20 -     64340 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24400 20 -     63452 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5842 20 +     22490 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3462 20 +      4141 TGT--------G----------T--------GTGCA---C-AT---------C-GTGC--CT
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6268 20 -     13050 TGT--------G----------T--------GTGCA---C-AT---------C-GTGC--CT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251503 20 -   6242583 TGT--------G----------T--------GTGCA---C-AT---------C-GTGC--CT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57237 20 +     59866 TGT--------G----------T--------GTGCA---C-AT---------C-GTGT--CT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   171994 11 -    200418 --------------------------------tgca---c-at---------t-gtg-----
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 4
s Tupaia_chinensis.KB320699.1                              1826077 19 -   4065304 TGT--------G----------T--T----TGTACA---C-AT---------T-GTG-----
i Tupaia_chinensis.KB320699.1                            I 208 I 4
s Tupaia_tana.TupTan_flattened_line_394                       3480 19 -     70247 TGT--------G----------T--T----TGTGCA---C-AT---------T-GTC-----
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 1
s Tursiops_truncatus.MRVK01000835.1                       17359925 15 -  33153633 ----------------------t------ttgtgca---c-at---------t-gtg-----
i Tursiops_truncatus.MRVK01000835.1                      I 3 I 4
s Uropsilus_gracilis.UroGra_scaffold_7153                   103702 35 -    105689 C-T--------G----------T--TAGACTGTGCCCTGC-GTTGATACCCATGGAG-----
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 4
s Ursus_maritimus.KK499267.1                                177704 19 +   5085361 tgt--------g----------t------ttgtgta---c-at---------t-gtc-----
i Ursus_maritimus.KK499267.1                             I 6 I 4
s Varecia_rubra.k141_787544                                  21440 22 -     30710 TGT--------A----------T--T---C-ACGTG---T-GT---------T-GTGT--CT
i Varecia_rubra.k141_787544                              C 0 I 1
s Varecia_variegata.k141_289850                              20348 22 -    147434 TGT--------A----------T--T---C-ACGCG---T-GT---------T-GTGT--CT
i Varecia_variegata.k141_289850                          C 0 I 1
s Vicugna_pacos.KN270157.1                                   74995 19 +   5488506 TAT--------G----------T------Ctgcgca---c-at---------t-gtg-----
i Vicugna_pacos.KN270157.1                               I 1 I 4
s Vulpes_lagopus.VulLag_flattened_line_12041                101099 19 -    112863 tgt--------g----------t------ttgagta---c-at---------t-gtc-----
i Vulpes_lagopus.VulLag_flattened_line_12041             I 9 I 4
s Xerus_inauris.XerIna_scaffold_2302                        162517  9 -    224448 -------------------------------GTGCC---T-AC---------T---------
i Xerus_inauris.XerIna_scaffold_2302                     I 5 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         24987 19 -     86975 tgt--------g----------t------ttgtgca---c-at---------t-gtc-----
i Zalophus_californianus.ZalCal_flattened_line_17732     I 13 I 4
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        604 36 +     36723 CTCAGCTCT-GG-AG-------CTGCA-GATGATGTC-----AGG----GTCT--C--A
s Acinonyx_jubatus.LLWD01001279.1                           809159 36 +   1699592 cacagctct-ag-ga------gttaac-attcatgtt-----aga----gtct--a---
i Acinonyx_jubatus.LLWD01001279.1                        I 4 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411051 36 +  29979442 caaagctcc-ag-gg------gttgcc-attcatgtc-----agg----gtct--a---
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Ailurus_fulgens.LNAC01001112.1                            211968 36 +    347723 cacagctct-ag-gg------gttgcc-attcatatc-----agg----gtct--a---
i Ailurus_fulgens.LNAC01001112.1                         I 4 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43913 36 +     53615 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39728 36 +     44087 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68647 36 -     84148 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGA----GTCT--C--A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40870 36 -     78289 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGA----GTCT--C--A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40318 36 +     55831 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGA----GTCT--C--A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38759 36 -     64179 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGA----GTCT--C--A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20402 36 -     24835 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGA----GTCT--C--A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37385 36 +     45454 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGA----GTCT--C--A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43084 36 +     70886 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5211 36 +     30854 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGA----GTCT--C--A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29350 36 +     42133 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGA----GTCT--C--A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583864 37 +   2318259 cacaactca-ag-gg------gttgct-gttcaggtc-----agg----gtcc--a--a
i Ammotragus_lervia.NIVO01071767.1                       I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172628 38 -    412891 CACAGCTC--GG-GGG------CGGCT-GTTCATGCC-----AGA----GTCA--AGGC
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             48963 37 -     68529 cacaactca-ag-gg------gctgct-gttcagctc-----aga----gttc--a--a
i Antilocapra_americana.AntAmePen_scaffold_21030         I 4 C 0
s Aotus_azarae.k141_118258                                   47159 36 -     65372 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40907 34 +     43593 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-------G----GTCT--C--A
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668917 36 +   5030052 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20559 36 -     23494 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5695 36 +      8415 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11865 37 -     32367 tactgctcc-agga-------gtggtt-gtttacatc-----aga----attg--a--t
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       15798 35 -     45910 CACAGGGCC-AG-GG-------CTGC--TGTCCTGTG-----AAG----GTGT--G--T
i Arctocebus_calabarensis.k141_1364444                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   468 39 -     15198 CACAGCACT-GG-GGG------CGGCT-GCTCATGCC-----AGA----GTCA--AGGC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 4 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271145 36 +  21539123 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7316 36 +     48076 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2450 36 -     28759 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30002 36 +     44353 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45377 36 -     71267 CTCAGTTCT-GG-GG-------CTGCT-GTTGATGTC-----AGG----GTCT--C--A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19433 36 -     33135 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2545 36 +     11645 CACAGGTCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Avahi_laniger.k141_2756659                             I 1 C 0
s Avahi_peyrierasi.k141_1823318                               2547 36 -     19611 CACAGATCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Avahi_peyrierasi.k141_1823318                          I 1 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955695 27 -  23207421 cacaactcc-ag-gg------gttgct-gttcatgt-----------------------
i Balaenoptera_acutorostrata.KI537508.1                  I 4 I 4
s Balaenoptera_bonaerensis.DF507193.1                         2903 27 -      4711 cacaactcc-ag-gg------gttgct-gttcatgt-----------------------
i Balaenoptera_bonaerensis.DF507193.1                    I 4 I 4
s Beatragus_hunteri.BeaHun_scaffold_7278                     84859 37 +    124022 cacaactca-ag-gg------gttgct-gttcaggtc-----aga----gtcc--a--a
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 4 C 0
s Bison_bison.KN261452.1                                     20392 37 +    288883 cacaactca-ag-gg------gttgct-gttcaggtc-----aga----gtcc--a--a
i Bison_bison.KN261452.1                                 I 4 C 0
s Bos_indicus.CM003047.1                                  20354779 37 +  48749331 cacaactca-ag-gg------gttgct-gttcaggtn-----aga----gtcc--a--a
i Bos_indicus.CM003047.1                                 I 4 C 0
s Bos_mutus.JH880303.1                                      753347 37 +   1948126 cacaactca-ag-gg------gttgct-gttcaggtg-----aga----gtcc--a--a
i Bos_mutus.JH880303.1                                   I 4 C 0
s Bos_taurus.CM000203.6                                   27543486 37 -  45695690 cacaactca-ag-gg------gttgct-gttcaggtg-----aga----gtcc--a--a
i Bos_taurus.CM000203.6                                  I 4 C 0
s Bubalus_bubalis.KI419123.1                               1528510 37 -   4408762 cacaactca-cg-gg------gttgct-gttcaggtc-----aga----gtcc--a--a
i Bubalus_bubalis.KI419123.1                             I 4 C 0
s Cacajao_ayresi.k141_96119                                   4336 36 +     28062 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39631 36 -     91139 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17156 36 +     95584 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17069 36 +    119600 CTCAGTTCT-GG-GG-------CTGCT-GGCAATGTC-----AGG----GTCT--C--A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6576 36 +     18648 CTCAGTTCT-GG-GG-------CTTCT-GGCGACATC-----AGG----GTCT--T--G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6252 36 -     13885 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14938 36 +     17162 CTCAGTTCT-GG-GG-------CTGCT-GGCGACATC-----AGG----GTCT--T--G
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449894 36 + 189096842 CTCAGTTCT-GG-GG-------CTGCT-GGCGACATC-----AGG----GTCT--T--G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16187 36 -     18408 CTCAGTTCT-GG-GG-------CTGCT-GGCGACATC-----AGG----GTCT--T--G
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629680 37 +  17673402 cacaggttt-ag-gg------gttgtg-gttcatgtc-----aga----gtct--a--a
i Camelus_bactrianus.KN276810.1                          I 4 C 0
s Camelus_dromedarius.KN272107.1                           4663966 37 +   7040546 cacaggctt-ag-gg------gttgtg-gttcatgtc-----aga----gtct--a--a
i Camelus_dromedarius.KN272107.1                         I 4 C 0
s Camelus_ferus.KB017975.1                                 1207626 37 +   1652518 cacaggttt-ag-gg------gttgtg-gttcatgtc-----aga----gtct--a--a
i Camelus_ferus.KB017975.1                               I 4 C 0
s CanFam4.chr16                                           42501489 36 +  60362399 cacagctct-ag-ag------gttgcc-attcatatt-----aga----attt--a---
i CanFam4.chr16                                          I 4 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5119 36 -     23171 cacagctct-ag-ag------gttgcc-attcatatt-----aga----attt--a---
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 4 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218480 36 +   9314153 cacagctct-ag-ag------gttgcc-attcatatt-----aga----attt--a---
i Canis_lupus_dingo.QKWQ01000480.1                       I 4 C 0
s Canis_lupus_familiaris.chr16                            41611605 36 +  59632846 cacagctct-ag-ag------gttgcc-attcatatt-----aga----attt--a---
i Canis_lupus_familiaris.chr16                           I 4 C 0
s Canis_lupus_orion.HG994398.1                            45103175 36 -  63665305 cacagctct-ag-ag------gttgcc-attcatatt-----aga----attt--a---
i Canis_lupus_orion.HG994398.1                           I 4 C 0
s Capra_aegagrus.CM003241.1                               27407575 37 -  46296322 cacaactca-ag-gg------gttgct-gttcaggtc-----aga----gtcc--a--a
i Capra_aegagrus.CM003241.1                              I 4 C 0
s Capra_hircus.CM004588.1                                 26589848 37 +  44709034 cacaactca-ag-gg------gttgct-gttcaggtc-----aga----gtcc--a--a
i Capra_hircus.CM004588.1                                I 4 C 0
s Carlito_syrichta.NW_007259797.1                           265986 40 +    496798 CATCTCCTC-TG-GC-------CTGCA-ACTTTTCACCCC-GAAG----GGAT--G--G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                514 39 +      5315 CACAGCTCT-GG-GGG------CGGCT-GTTCATGCC-----AGA----GTCA--AGGC
i Carollia_perspicillata.CarPer_scaffold_170178          I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75348 37 -    217609 cacaactct-gg-aa------gttgat-gtttatgtc-----aga----atct--a--a
i Catagonus_wagneri.CatWag_scaffold_2839                 I 4 C 0
s Cebuella_niveiventris.k141_592277                           1472 36 -     12580 CTCAGTTCT-GG-GG-------CTGCT-GGCAACGTC-----AGG----GTCT--C--G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39358 36 +     53515 CTCAGTTCT-GG-GG-------CTGCT-GGCGACGTC-----AGG----GTCT--C--G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367590 36 -  26074798 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4479 36 -     34880 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63574 36 -     89041 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        14266 40 -     50533 CACCTCCTC-TG-GC-------CTGCA-ACTTATCACCC-TGAAG----GGAT--G--G
i Cephalopachus_bancanus.k141_1275952                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488559 35 -  27778364 cacagctct-ag-gg------gttgt--ggtcacatc-----aga----gtct--a---
i Ceratotherium_simum.JH767749.1                         I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15392 35 +     27315 cacagctct-ag-gg------gttgt--ggtcacatc-----aga----gtct--a---
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 4 C 0
s Cercocebus_atys.KQ010504.1                                137073 36 -   4669795 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40814 36 +     47900 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40646 36 -     44860 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40628 36 -    148725 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23687 36 -     40656 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGA----GTCT--C--A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3622 36 +     20796 CTTAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7877 36 -     17524 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23566 36 -     34525 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8293 20 -     25376 -------------------------CT-GGTGAGGTC-----AGG----GTCT--C--A
i Cercopithecus_lowei.k141_2101310                       I 10 C 0
s Cercopithecus_albogularis.ctg5                                  360842 36 -  39242232 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266588 36 +  21565898 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28040 36 -     45857 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23831 36 -     32606 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27561 43 +     27662 CTCAGCTCT-GG-AGGCTGTTACCGCT-GAGGTGACC-----AAG----TCCT--C--C
i Cercopithecus_petaurista.k141_1716667                  C 0 I 54
s Cercopithecus_pogonias.k141_6079                           21530 36 +     70610 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18395 36 +     36323 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9378 37 -     19938 taaatctct-ag-gg------gttgct-gcttatgtc-----aga----gtct--a--g
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 4 C 0
s Cheirogaleus_major.k141_666340                             26960 36 -     33796 CACAGATCT-GG-GG-------CTGCT-GTCCACATC-----CAG----GTAT--G--G
i Cheirogaleus_major.k141_666340                         I 1 C 0
s Cheirogaleus_medius.k141_759766                             1155 36 -     15404 CACAGATCT-GG-GG-------CTGCT-GTTCACGTC-----CAG----GTAT--G--G
i Cheirogaleus_medius.k141_759766                        I 1 C 0
s Cheracebus_lucifer.k141_2312002                             5437 36 -     32913 CTCAGTTCC-GG-GG-------ATGCT-GGCGACGTC-----AGG----GTCT--C--A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15850 36 -     40346 CTCAGTTCC-GG-GG-------ATGCT-GGCGACGTC-----AGG----GTCT--C--A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16114 36 +    216457 CTCAGTTCC-GG-GG-------ATGCT-GGCGACGTC-----AGG----GTCT--C--A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15893 36 +     39636 CTCAGTTCC-GG-GG-------ATGCT-GGCGACGTC-----AGG----GTCT--C--A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            326 36 +      5346 CTCGGTTCT-GG-GG-------CTGCT-GGTGACGTC-----AGG----GTCT--C--G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           38978 36 -    112038 CCCGGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4550 36 +     34062 CCCGGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339291 36 +  18827391 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5902 36 -     44032 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300617 36 - 135778131 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405150 36 -   2368649 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374309 36 - 200372422 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5034 36 -      6605 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----AGG----GCCT--C--A
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803462 34 +  53390261 CACAGTTCT-AG--GG------TGGTT-GCCCATGTC-----AG------TCT--C--A
i Condylura_cristata.JH655891.1                          I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8885 16 +     10921 CACAGCCCT-AG-GGG------TT-----------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 4 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               396 36 +     87169 cagagctct-ag-gg------gttacc-attcacgtt-----aga----gtct--a---
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 4 C 0
s Dasypus_novemcinctus.JH564415.1                          2105584 37 -   2246927 taaatctgt-ag-ag------gttgct-gcttatgtc-----aga----gtct--a--g
i Dasypus_novemcinctus.JH564415.1                        I 4 C 0
s Daubentonia_madagascariensis.ctg71                        288988 36 +  12879189 CCCAGGCCT-AG-GG-------CTGCT-GTTCATGTC-----AAG----GTGT--G--G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624023 27 -  35494412 cacaactcc-ag-gg------gttgct-gttcatgt-----------------------
i Delphinapterus_leucas.KZ290073.1                       I 4 I 4
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660846 35 -   1390856 cacagctct-ag-gg------gttgt--ggtcacatc-----aga----gtct--a---
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 4 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135638 35 -    198055 cacagctct-ag-gg------gttgt--ggtcacgtc-----aga----gtct--a---
i Diceros_bicornis.DicBicMic_scaffold_5955               I 4 C 0
s Eidolon_helvum.AWHC01266696.1                               2223 16 +     19438 CACAGCTCT-AG-GGG------TG-----------------------------------
i Eidolon_helvum.AWHC01266696.1                          I 4 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238250 37 -    607251 cacaactca-ag-gg------gctcct-gttccggtc-----aga----gtcc--a--a
i Elaphurus_davidianus.JRFZ01104969.1                    I 4 C 0
s Enhydra_lutris.KZ291758.1                               24906517 36 +  41312741 cacagctct-ag-gg------gttgcc-attcacatc-----agg----gtct--a---
i Enhydra_lutris.KZ291758.1                              I 4 C 0
s Eptesicus_fuscus.JH977646.1                             12573784 39 +  14770903 cagagctct-ag-gg------gctgcc-cttcatgtc-----aga----gtca--aggt
i Eptesicus_fuscus.JH977646.1                            I 4 C 0
s Equus_asinus.JREZ01000139.1                              3037814 37 -   4378816 cacagggcc-ag-gc------gtcgcc-attcatgtc-----aga----gtct--a--a
i Equus_asinus.JREZ01000139.1                            I 4 C 0
s Equus_caballus.CM000403.2                               21371748 37 +  39960074 cacagggcc-ag-gg------gtcgcc-attcatgtc-----aga----gtct--a--a
i Equus_caballus.CM000403.2                              I 4 C 0
s Equus_przewalskii.KK951119.1                              408534 37 -    498745 cacagggcc-ag-gg------gtcgcc-attcatgtc-----aga----gtct--a--a
i Equus_przewalskii.KK951119.1                           I 4 C 0
s Erythrocebus_patas.Contig38                               258849 36 +  21539334 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63574 27 -    133382 cacaactcc-ag-gg------gttgct-gttcatgt-----------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 4 I 4
s Eubalaena_japonica.EubJap_flattened_line_118172             3790 27 +      7672 cacaactcc-ag-gg------gttgct-gttcatgt-----------------------
i Eubalaena_japonica.EubJap_flattened_line_118172        I 4 I 4
s Eulemur_albifrons.k141_51491                               11950 36 -     24895 CATAGGTCT-AG-GG-------CTGCT-GTTCATGTC-----AAC----GTAT--A--G
i Eulemur_albifrons.k141_51491                           I 1 C 0
s Eulemur_collaris.k141_601111                               39662 36 -     70999 CATAGTTCT-AG-GG-------CTGCT-GTTCATGTC-----AAC----ATAT--A--G
i Eulemur_collaris.k141_601111                           I 1 C 0
s Eulemur_coronatus.k141_384460                              83622 36 +    112731 CATAGGCCT-AG-GG-------CTGCT-GTTCATGTC-----AAC----GTAT--A--G
i Eulemur_coronatus.k141_384460                          I 1 C 0
s Eulemur_flavifrons.k141_433119                             40194 36 +     68309 CATAGGTCT-AG-GG-------CTGCT-GTTCATGTC-----AAT----GTAT--A--G
i Eulemur_flavifrons.k141_433119                         I 1 C 0
s Eulemur_fulvus.k141_636316                                 50519 36 -     65740 CATAGGTCT-AG-GG-------CTGCT-GTTCATGTC-----AAC----GTAT--A--G
i Eulemur_fulvus.k141_636316                             I 1 C 0
s Eulemur_macaco.k141_1562045                                21149 36 -     75513 CATAGGTCT-AG-GG-------CTGCT-GTTCATGTC-----AAC----GTAT--A--G
i Eulemur_macaco.k141_1562045                            I 1 C 0
s Eulemur_mongoz.k141_232305                                 45342 36 -     97555 CATAGGTCT-AG-GG-------CTGCT-GTTCATGTC-----AAC----GTAT--A--G
i Eulemur_mongoz.k141_232305                             I 1 C 0
s Eulemur_rubriventer.k141_1423786                            2067 38 +     30972 TGTAGGTCT-AG-GG-------CTGCT-GTTCATGTC-----AAG----GTATATA--G
i Eulemur_rubriventer.k141_1423786                       I 1 C 0
s Eulemur_rufus.k141_514691                                  39792 36 -     52037 CATAGGTCT-AG-GG-------CTGCT-GTTCATGTC-----AAC----GTAT--A--G
i Eulemur_rufus.k141_514691                              I 1 C 0
s Eulemur_sanfordi.k141_1122526                              56193 36 -    111500 CATAGGTCT-AG-GG-------CTGCT-GTTCATGTC-----AAC----GTAT--A--G
i Eulemur_sanfordi.k141_1122526                          I 1 C 0
s Felis_catus.CM001381.2                                 186242818 36 - 206538554 cacagctct-ag-ga------gttaac-attcatgtt-----aga----gtct--g---
i Felis_catus.CM001381.2                                 I 4 C 0
s Felis_catus_fca126.CM031415.1                          185112600 36 - 205367284 cacagctct-ag-ga------gttaac-attcatgtt-----aga----gtct--g---
i Felis_catus_fca126.CM031415.1                          I 4 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23948 36 -     30238 cacagctct-gg-ga------gttaac-attcatgtt-----aga----gtct--g---
i Felis_nigripes.FelNig_flattened_line_31944             I 4 C 0
s Galago_moholi.ctg3793                                     119379 35 -    137831 CACAGGGCC-AG-TG-------CTGC--TGTCCTGAG-----AAG----GTGT--G--T
i Galago_moholi.ctg3793                                  I 1 C 0
s Galago_senegalensis.k141_991736                             2919 35 +     22493 CACAGGGCC-AG-TG-------CTGC--TGTCCTGAG-----AAG----GTGT--G--T
i Galago_senegalensis.k141_991736                        I 1 C 0
s Galagoides_demidoff.k141_561628                            15112 35 -     32986 CACAGGGCC-AG-GG-------CTGC--TGTCCTGAG-----AAG----GTGT--G--T
i Galagoides_demidoff.k141_561628                        I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               3264 37 +      5976 cacagctct-ag-gg------gctgct-gttcatgtc-----aga----gtcc--a--a
i Galeopterus_variegatus.GalVar_scaffold_132127          I 174 I 48
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89929 37 -     95226 cacaactca-ag-gg------gttgct-gttcaggtc-----aga----gtcc--a--a
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 4 C 0
s Gorilla_beringei.k141_3358147                                955 36 -      8343 CTCAGCTCT-GG-AG-------CTGCA-GATGATGTC-----AGG----GTCT--C--A
i Gorilla_beringei.k141_3358147                          I 22 C 0
s Gorilla_gorilla.LT578341.1                                250455 36 - 186649187 CTCAGCTCT-GG-AG-------CTGCA-GATGATGTC-----AGG----GTCT--C--A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11883 36 -     40692 GACAGGTCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Hapalemur_alaotrensis.k141_330369                      I 1 C 0
s Hapalemur_gilberti.k141_646465                             33285 36 +     49394 GACAGGTCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Hapalemur_gilberti.k141_646465                         I 1 C 0
s Hapalemur_griseus.k141_763500                              58153 36 -     66874 GACAGGTCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Hapalemur_griseus.k141_763500                          I 1 C 0
s Hapalemur_meridionalis.k141_258450                          7030 36 -     42923 GACAGGTCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Hapalemur_meridionalis.k141_258450                     I 1 C 0
s Hapalemur_occidentalis.k141_578367                         14026 36 -     53142 GACAGGTCT-AG-GG-------CTGCT-GTTTATGTC-----AAG----GTAT--G--G
i Hapalemur_occidentalis.k141_578367                     I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26712 36 -    327341 catagctgt-ag-gg------gttacc-attcatgtt-----aga----ggct--a---
i Helogale_parvula.HelPar_flattened_line_2585            I 4 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7682 37 +     48891 cacaactca-ag-gc------gttgct-gttcaggtc-----agg----gtcc--a--a
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 4 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6281 37 -     36432 cacagttct-gg-ga------attgct-gttcatgtc-----agc----atct--a--a
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 4 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546113 16 -   1711038 catagctct-ag-ag------gtt-----------------------------------
i Hipposideros_armiger.JXIK01000431.1                    I 4 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45422 16 +     49977 cacagctct-ag-gg------att-----------------------------------
i Hipposideros_galeritus.HipGal_scaffold_23202           I 4 C 0
s Hoolock_leuconedys.ctg274                                    138351 36 -    630532 CTCAGCTCT-GG-AG-------CTGCA-GGTGATGTC-----AGG----GTCT--C--A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65391 36 +     83186 catagctct-ag-gg------gttacc-attcatgtt-----aga----gtct--a---
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 4 C 0
s Hylobates_agilis.k141_1155965                               1384 36 +     12352 CTCAGCTCT-GG-AG-------CTGCA-GGTGATGTC-----AGG----GTCT--C--A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8567 36 +     55766 CTCAGCTCT-GG-AG-------CTGCA-GGTGATGTC-----AGG----GTCT--C--A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047906 36 + 191637585 CTCAGCTCT-GG-AG-------CTGCA-GGTGATGTC-----AGG----GTCT--C--A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797238 36 +  11177569 CTCAGCTCT-GG-AG-------CTGCA-GGTGATGTC-----AGG----GTCT--C--A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375248 36 +   7955117 cacagttac-ag-g-------ctggtt-attcacatc-----aga----attg--a--t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                      32 36 -      1527 CACAGGTCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Indri_indri.k141_4600452                               I 1 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1810 27 -     16823 cacaactcc-ag-gg------gttgct-gttcatgt-----------------------
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 4 I 4
s Kogia_breviceps.KogBre_flattened_line_3970                 64299 27 -     97402 cacaactcc-ag-gg------gttgct-gttcatgt-----------------------
i Kogia_breviceps.KogBre_flattened_line_3970             I 4 I 4
s Lagothrix_lagothricha.k141_246028                          39692 36 +    110728 CTCAGTTCT-GG-GG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59292 17 -     65777 CAGAGCTAT-AG-GAG------TTg----------------------------------
i Lasiurus_borealis.LasBor_scaffold_16567                I 4 I 129
s Lemur_catta.scaffold_24                                 14756675 36 +  30322482 GACAGGTCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Lemur_catta.scaffold_24                                I 1 C 0
s Leontocebus_fuscicollis.k141_2994775                         397 36 -     13097 CTCGGTTCT-GG-GG-------CTGCT-GGTGACATC-----AGG----GTCT--C--G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            348 36 +      5940 CTCGGTTCT-GG-GG-------CTGCT-GGTGACGTC-----AGG----GTCT--C--G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                           0 15 -      5717 -------------------------------GACGTC-----AGG----GTCT--C--G
i Leontocebus_nigricollis.k141_3905062                   N 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6601 36 -     11567 CTCAGTTCT-GG-GG-------CTGCT-GGTGACATC-----AGG----GTCT--C--A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          7982 36 -     12945 CTCAGTTCT-GG-GG-------CTGCT-GGTGACATC-----AGG----GTCT--C--G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5323 36 +     29618 TACAGGTCT-AG-GG-------CTGCT-GTTCACATC-----CAG----GTAT--G--G
i Lepilemur_ankaranensis.k141_567626                     I 1 C 0
s Lepilemur_dorsalis.k141_387009                              5320 36 +     31569 TACAGGTCT-AG-GG-------CTGCT-GTTCACATC-----CAG----GTAT--G--G
i Lepilemur_dorsalis.k141_387009                         I 1 C 0
s Lepilemur_ruficaudatus.k141_330196                          5326 40 +     24756 TACAGGTCT-AG-GG-------CTGCC-GTTCACGTC-----CAGGTATGTAT--G--G
i Lepilemur_ruficaudatus.k141_330196                     I 1 C 0
s Lepilemur_septentrionalis.k141_360456                       5325 36 +     16388 TACAGGTCT-AG-GG-------CTGCT-GTTCACATC-----CAG----GTAT--G--G
i Lepilemur_septentrionalis.k141_360456                  I 1 C 0
s Leptonychotes_weddellii.KB714746.1                        809610 36 -   3914936 cacagctct-ag-gg------gttgcc-attcatgtc-----agg----gtct--a---
i Leptonychotes_weddellii.KB714746.1                     I 4 C 0
s Lipotes_vexillifer.KE559953.1                             333333 27 +    662738 cacacctcc-ag-gg------gttgct-gttcatgt-----------------------
i Lipotes_vexillifer.KE559953.1                          I 4 I 4
s Lophocebus_aterrimus.ctg367                               329029 36 -   1826925 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2356 35 +     19643 CACAGGGCC-AG-GG-------CTGC--TGTCCTGTG-----AAG----GTGT--G--T
i Loris_lydekkerianus.k141_2031736                       I 1 C 0
s Loris_tardigradus.ctg83                                  5036014 35 -   6120653 CACAGGGCC-AG-GG-------CTGC--TGTCCTGTG-----AAG----GTGT--G--T
i Loris_tardigradus.ctg83                                I 1 C 0
s Lycaon_pictus.CM007581.1                                41610760 36 +  59628241 cacagctct-ag-ag------gttgct-attcatatt-----aga----attt--a---
i Lycaon_pictus.CM007581.1                               I 4 C 0
s Macaca_arctoides.k141_1757516                              41309 36 -     61512 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368937 36 -  60120075 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21257 36 +     30207 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18360 36 -     24934 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21144 36 +     30527 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32333 36 -     50087 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42071 36 +     51645 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410645 36 - 187317192 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395528 36 +  25927173 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44660 36 -     62418 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGCTC-----AGG----GTCT--C--A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21347 36 +     24253 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41104 36 +     59329 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266936 36 +    668171 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18282 36 +     21031 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32014 36 +     33478 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219295 16 -    270270 CACAGCTCT-AG-GGG------TG-----------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 4 C 0
s Mandrillus_leucophaeus.scaffold280                        318412 36 +  24302211 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353244 36 -    752769 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670042 30 -    737560 ctcaattct-ag-gg------attgcc-a------tc-----aga----gtgt--a---
i Manis_javanica.JSZB01003497.1                          I 4 C 0
s Manis_pentadactyla.KN006162.1                             217336 30 +    317179 cacaattct-ag-gg------attgcc-a------tc-----aga----gtgt--g---
i Manis_pentadactyla.KN006162.1                          I 4 C 0
s Marmota_marmota.CZRN01000018.1                           7489341 36 +  40650429 cacagttac-ag-g-------ctggtt-agtcacatc-----aga----attg--a--t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146354 10 +    207569 CA------T-AG-GGG------TT-----------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14535 36 -     74585 cacagctct-ag-gg------gtggcc-attcatgtc-----agg----atct--a---
i Mellivora_capensis.MelCap_flattened_line_19308         I 4 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79877 27 +     93471 cacaactcc-ag-gg------gttgct-gttcatgt-----------------------
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 4 I 4
s Mico_argentatus.k141_582562                                 6360 36 +     17804 CTCAGTTCT-GG-GG-------CTGCT-GGCGACATC-----AGG----GTCT--T--G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7133 36 -     12984 CTCAGTTCT-GG-GG-------CTGCT-GGCGACATC-----AGG----GTCT--T--G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15095 36 -     26561 CTCAGTTCT-GG-GG-------CTGCT-GGCGACATC-----AGG----GTCT--T--G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980923 36 +  93316391 CACAGGTCT-AG-GG-------CTGCT-GTTCACCTC-----CAG----GTAT--G--G
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180603 39 +    200668 CACAGCGCTGGG--GG------CAGCT-GTTCATGCC-----AGA----GTCA--AGGT
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 4 C 0
s Miopithecus_ogouensis.k141_1534655                         18402 36 -     27822 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4620 36 +     27589 cacagctct-ag-gg------gttgcc-attcatgtc-----agg----gtct--a---
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 4 C 0
s Mirza_zaza.k141_766280                                     48784 36 -     62432 CACAGATCT-AG-GG-------CTGCT-GTTCACGTC-----CAG----GTAT--G--G
i Mirza_zaza.k141_766280                                 I 1 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351766 27 +    437263 cacaactcc-ag-gg------gttgct-gttcatgt-----------------------
i Monodon_monoceros.MonMon_M_scaffold_103                I 4 I 4
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174773 38 +    366855 CACAGCTT--GG-GGG------CTGCT-GTTTGTGTC-----AGA----GTCA--AGGC
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22834 37 -     82753 cacaactta-ag-gg------gttgct-gttcaggtc-----aga----gtcc--a--a
i Moschus_moschiferus.MosMos_scaffold_13123              I 4 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14481 36 -     63510 catagctgt-ag-gg------gttact-gttcatgtt-----aga----gtct--a---
i Mungos_mungo.MunMun_flattened_line_18455               I 4 C 0
s Murina_feae.MurFea_scaffold_17764                          33707 39 +     47283 cagagctct-ag-gg------gttgcc-cttcatgtc-----aga----gtca--agat
i Murina_feae.MurFea_scaffold_17764                      I 4 C 0
s Mustela_putorius.JH418006.1                             14343572 36 +  14710649 cacagctct-tg-gg------gttgcc-attcacatc-----agg----gtct--a---
i Mustela_putorius.JH418006.1                            I 4 C 0
s Myotis_brandtii.KE162005.1                               9788140 39 +  10118263 cagagctct-ag-gg------gttgcc-cttcatgtc-----aga----gtca--agat
i Myotis_brandtii.KE162005.1                             I 4 C 0
s Myotis_davidii.KB100139.1                                4378551 39 +   6019432 cagagctct-ag-gg------gtttcc-ctttatgtc-----aga----gtca--agat
i Myotis_davidii.KB100139.1                              I 4 C 0
s Myotis_lucifugus.GL429869.1                               378371 39 +   4330536 cagagctct-ag-gg------gttgcc-cttcatgtc-----aga----gtca--agat
i Myotis_lucifugus.GL429869.1                            I 4 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        2090 39 +      3929 cagagctct-ag-gg------gttgcc-cttcatctc-----aga----gtca--agat
i Myotis_myotis.MyoMyo_scaffold_185951                   I 4 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116118 37 +    130748 taaacctct-ag-ag------gttctt-gctcatgtc-----aaa----gttg--a--g
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 4 C 0
s Nasalis_larvatus.k141_1350636                              24688 36 +     34575 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465005 36 -  31847680 cacagctct-ag-gg------gttgcc-attcatgtc-----agg----gtct--a---
i Neomonachus_schauinslandi.NINY01007730.1               I 4 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225935 27 -   7148211 cacaactcc-ag-gg------gttgct-gttcatgt-----------------------
i Neophocaena_asiaeorientalis.KZ687982.1                 I 4 I 4
s Noctilio_leporinus.NocLep_scaffold_7894                   122978 40 -    149072 CACAGCCCT-AGGGGG------CTGTT-GTCCCTGTC-----AGA----GTCG--TGGT
i Noctilio_leporinus.NocLep_scaffold_7894                I 4 C 0
s Nomascus_annamensis.k141_1771965                           49636 36 -    132029 CTCAGCTCT-GG-AG-------CTGCA-GGTGATGTC-----AGG----GTCT--C--A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5732 36 -     16345 CTCAGCTCT-GG-AG-------CTGCA-GGTGATGTC-----AGG----GTCT--C--A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11615 36 +     22201 CTCAGCTCT-GG-AG-------CTGCA-GGTGATGTC-----AGG----GTCT--C--A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409952 36 -  22158432 CTCAGCTCT-GG-AG-------CTGCA-GGTGATGTC-----AGG----GTCT--C--A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22015 36 -     54323 CTCAGCTCT-GG-AG-------CTGCA-GGTGATGTC-----AGG----GTCT--C--A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194375 36 +   9404916 cacagctct-ag-aa------gttgcc-attcatatt-----aga----attt--a---
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 4 C 0
s Nycticebus_bengalensis.LG01                             93631129 35 + 196305487 CACAGGGCC-AG-GG-------CTGC--TGTACTGTG-----AAG----GTGT--G--T
i Nycticebus_bengalensis.LG01                            I 1 I 1
s Nycticebus_coucang.k141_3120371                              381 35 +      1915 CACAGGGCC-AG-GG-------CTGC--TGTACTGTG-----AAG----GTGT--G--T
i Nycticebus_coucang.k141_3120371                        n 57 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559409 34 - 199412804 CACAGGGCC-AG-GG-------CTGC--TGTACTGTG-----AAG----GTGT--G---
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 I 1
s Odobenus_rosmarus.KB229312.1                             1447790 36 +   2017862 cacagcttt-ag-gg------gttgcc-attcatgtc-----aga----gtct--a---
i Odobenus_rosmarus.KB229312.1                           I 4 C 0
s Odocoileus_virginianus.KZ100018.1                         434821 37 -    630418 cacaacgta-ag-ag------gttgct-gttcaggtc-----aga----gtcc--a--a
i Odocoileus_virginianus.KZ100018.1                      I 4 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12813 37 +    150152 cacaactca-ag-gg------attgct-gttcaggtc-----aga----gtcc--a--a
i Okapia_johnstoni.LVCL01S0005463.1                      I 4 C 0
s Orcinus_orca.KB316932.1                                  8095205 27 +  10937097 cacaactcc-ag-gg------gttgct-gttcatgt-----------------------
i Orcinus_orca.KB316932.1                                I 4 I 4
s Otocyon_megalotis.JAEUCK010005147.1                        35438 36 +    559221 cacagctct-ag-ag------gttgcc-attcatatt-----aga----attt--a---
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 C 0
s Otolemur_crassicaudatus.k141_85057                         22655 35 -     23432 CACAGGGCC-AG-TG-------CTGC--TGTCCTGAG-----AAG----GTGT--G--T
i Otolemur_crassicaudatus.k141_85057                     I 1 C 0
s Otolemur_garnettii.GL873799.1                             347220 35 +   1103335 CACAGGGCC-AG-TG-------CTGC--TGTCCTGAG-----AAG----GTGT--G--T
i Otolemur_garnettii.GL873799.1                          I 1 C 0
s Ovis_aries.CM001607.2                                   26402802 37 -  44047080 cacaactca-ag-gg------gttgct-gttcaggtc-----agg----gtcc--a--a
i Ovis_aries.CM001607.2                                  I 4 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3321 37 +     17875 cacaactca-ag-gg------gttgct-gttcaggtc-----agg----gtcc--a--a
i Ovis_canadensis.OviCan_scaffold_67953                  I 4 C 0
s Pan_troglodytes.KZ622849.1                                 28928 36 -    110857 CTCAGCTCT-GG-AG-------CTGCA-GATGATGTC-----AGG----GTCT--C--A
i Pan_troglodytes.KZ622849.1                             I 22 I 386
s Panthera_onca.PanOnc_flattened_line_3271                   20536 36 -    230217 cacagctct-ag-ga------gttaac-attcatgtt-----aga----gtct--a---
i Panthera_onca.PanOnc_flattened_line_3271               I 4 C 0
s Panthera_pardus.KV860321.1                              18457862 36 -  18783137 cacagctct-ag-ga------gttaac-attcatgtt-----aga----gtct--a---
i Panthera_pardus.KV860321.1                             I 4 C 0
s Panthera_tigris.KE722367.1                               3968590 36 +   8748460 cacagctct-ag-ga------gttaac-attcatgtt-----aga----gtct--a---
i Panthera_tigris.KE722367.1                             I 4 C 0
s Pantholops_hodgsonii.KE114653.1                          1614245 37 +   2937107 cacaactca-ag-gg------gttgct-gttcaggtc-----agg----gtcc--a--a
i Pantholops_hodgsonii.KE114653.1                        I 4 C 0
s Papio_anubis.CM001495.2                                   239256 36 - 183742232 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5723 36 +     21308 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286760 36 -  20919399 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18376 36 -     27687 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11512 36 +     16796 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18322 36 -     23640 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11453 36 +     78924 cacagttct-ag-gg------gttacc-attcatatt-----aga----gtct--a---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Perodicticus_ibeanus.k141_1921260                          21219 35 +     31479 CACAGGGCC-AG-GG-------CTGC--TGTCCTGTG-----AAG----GTGT--G--T
i Perodicticus_ibeanus.k141_1921260                      I 1 C 0
s Perodicticus_potto.k141_1854441                            13590 35 -     24908 CACAGGGCC-AG-GG-------CTGC--TGTTCTGTG-----AAG----GTGT--G--T
i Perodicticus_potto.k141_1854441                        I 1 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11063 27 -     15039 cacaactcc-ag-gg------gttgct-gttcatgt-----------------------
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 4 I 4
s Piliocolobus_badius.k141_2495623                            5142 36 +      7560 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60849 36 -     63152 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43448 36 +     45295 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1127 36 +      5735 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            45978 38 +     46691 CAGAGCTCT--G-GGG------TTGCC-CTTCAAGTC-----AGA----GTCA--AGGT
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        I 4 C 0
s Pithecia_albicans.k141_1239476                             61328 36 +    207309 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2448 36 -     25401 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28163 36 +     58159 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28439 36 +     63561 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28202 36 +     51148 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553195 36 -   4542175 CTCAGTTCT-GG-GG-------CTGCT-GGCGATTTC-----AGG----GTCT--C--A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28186 36 +     51125 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3147 27 -      8168 cacaactcc-ag-gg------gttgct-gttcatgt-----------------------
i Platanista_gangetica.PlaMin_flattened_line_167872      I 4 I 4
s Plecturocebus_bernhardi.k141_2549090                        4613 35 +     39866 CTCAGT-CC-AG-GG-------CTGCT-GGCGACGTC-----AGG----GTCT--C--A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39101 35 -     87950 CTCAGT-CC-AG-GG-------CTGCT-GGCGACGTC-----AGG----GTCT--C--A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39494 35 -     88961 CTCAGT-CC-AG-GG-------CTGCT-GGCGACGTC-----AGG----GTCT--C--A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4194 35 -     39403 CTCAGT-CC-AG-GG-------CTGCT-GGCGACGTC-----AGG----GTCT--C--A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39147 35 +     87928 CTCAGT-CC-AG-GG-------CTGCT-GGCGACGTC-----AGG----GTCT--C--A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4191 35 -     60166 CTCAGT-CC-AG-GG-------CTGCT-GGCGACGTC-----AGG----GTCT--C--A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11127 35 -     67232 CTCAGT-CC-AG-GG-------CTGCT-GGCGACGTC-----AGG----GTCT--C--A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39043 35 -     90634 CTCAGT-CC-AG-GG-------CTGCT-GGCGACGTC-----AGG----GTCT--C--A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40511 35 +     89403 CTCAGT-CC-AG-GG-------CTGCT-GGCGACGTC-----AGG----GTCT--C--A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173461 36 - 189387572 CTCAGCTCT-GG-AG-------CTGCA-GGTGATGTC-----AGG----GTCT--C--A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188459 36 -   9816681 CTCAGCTCT-GG-AG-------CTGCA-GGTGATGTC-----AGG----GTCT--C--A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23628 36 +     69807 CTCAGCTCT-GG-AG-------CTGCT-GGTGACGTC-----AGG----GTCT--C--A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40823 36 -     80239 CTCAGCTCT-GG-AG-------CTGCT-GGTGACGTC-----AGG----GTCT--C--A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979833 36 +   4620579 GACAGGTCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Prolemur_simus.MPIZ01000396.1                          I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562410 36 -   2598838 CACAGGTCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Propithecus_coquerelli.NW_012148875.1                  I 1 C 0
s Propithecus_coronatus.k141_209299                             56 36 -      7103 CACAGGTCT-AG-GG-------CTGCT-GTTCACATC-----AAG----GTAT--G--G
i Propithecus_coronatus.k141_209299                      I 1 C 0
s Propithecus_diadema.k141_153680                              652 36 -     11706 CACAGGTCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Propithecus_diadema.k141_153680                        I 1 C 0
s Propithecus_edwardsi.k141_635656                            4387 36 -     30655 CACAGGTCT-AG-GG-------CTGCT-GTTCACATC-----AAG----GTAT--G--G
i Propithecus_edwardsi.k141_635656                       I 1 C 0
s Propithecus_perrieri.k141_1496898                          30712 36 +     46564 CACAGGTCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Propithecus_perrieri.k141_1496898                      I 1 C 0
s Propithecus_tattersalli.k141_1127767                       91003 36 -     98465 CACAGGTCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Propithecus_tattersalli.k141_1127767                   I 1 C 0
s Propithecus_verreauxi.k141_1047036                          4625 36 +     35169 CACAGGTCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Propithecus_verreauxi.k141_1047036                     I 1 C 0
s Pteronotus_parnellii.KE847780.1                            47850 35 -     66298 CACAGCTCG-GC-GCG------CGGCT-GCTCATGCC-----CGA----GTCA------
i Pteronotus_parnellii.KE847780.1                        I 4 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4676 36 -     10349 cacagctct-ag-gg------gttgcc-attcacatc-----agg----gtct--a---
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 4 C 0
s Pteropus_alecto.KB030862.1                               5836768 16 -  28871421 CACAGGTCT-AG-GGG------TG-----------------------------------
i Pteropus_alecto.KB030862.1                             I 4 C 0
s Pteropus_vampyrus.KN525825.1                             3533343 16 -   4952924 CACAGGTCT-AG-GGG------TG-----------------------------------
i Pteropus_vampyrus.KN525825.1                           I 4 C 0
s Puma_concolor.QAVW01001104.1                            18095414 36 +  38429054 cacagctct-ag-ga------gttaac-attcatgtt-----aga----gtct--a---
i Puma_concolor.QAVW01001104.1                           I 4 C 0
s Pygathrix_cinerea.k141_1153803                             23013 36 +     91421 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  149505 36 -   7812017 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              3883 36 +     72585 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51742 37 +     55069 cacaacgta-ac-gg------gttgct-gttcaggtc-----aga----gtcc--a--a
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 4 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909409 16 +   3329780 cacagctct-ag-gg------gtt-----------------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     I 4 C 0
s Rhinopithecus_bieti.k119_221883                            24846 36 +     27361 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118205 36 + 195417433 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232454 36 -   7961872 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----AGG----GTCT--C--A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70813 16 -    116970 CAGAGCTCT-AG-GGG------TG-----------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 4 C 0
s Saguinus_bicolor.k141_1429097                                324 36 +     27962 CTCGGTTCT-GG-GG-------CTGCT-GGTGACGTC-----AGG----GTCT--C--G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              324 36 +      6077 CTCGGTTCT-GG-GG-------CTGCT-GGCGACGTC-----AGG----GTCT--C--G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              345 36 +      5971 CTCGGTTCT-GG-GG-------CTGCT-GGCGACGTC-----AGG----GTCT--C--G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                397 36 +      5932 CTCGGTTCT-GG-GG-------CTGCT-GGCGACGTC-----AGG----GTCT--C--G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               548 36 -      2099 CTCGGTTCT-GG-GG-------CTGCT-GGCGACGTC-----AGG----GTCC--C--G
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387583 36 - 209938924 CTCGGTTCT-GG-GG-------CTGCT-GGTGACGTC-----AGG----GTCT--C--G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 348 36 +      5979 CTCGGTTCT-GG-GG-------CTGCT-GGCGACGTC-----AGG----GTCC--C--G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                                723 36 -      4301 CTCGGTTCT-GG-GG-------CTGCT-GGCGACGTC-----AGG----GTCT--C--G
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6385 37 +     16473 cacaactca-ag-gg------gttgct-gttcaagtt-----aga----gtcc--a--a
i Saiga_tatarica.SaiTat_scaffold_39512                   I 4 C 0
s Sapajus_apella.ctg103                                     234814 36 +   5703754 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4404 36 +     21866 CTCAGTTCT-GG-GG-------CTGCT-GGCGATGTC-----AGG----GTCT--C--A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112514 35 +    313613 CACAATTCT-AG-AGG------TTGTT-GTTTGTATC-----CA------TCT--C--G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 5 C 0
s Semnopithecus_entellus.k141_158471                         21336 36 +     27374 CTCCGCTCT-GG-AG-------CTGCT-GGTGATGTC-----ACG----GTCT--C--A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24853 36 +     58920 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----ACG----GTCT--C--A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11348 36 -     45317 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----ACG----GTCT--C--A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19005 36 -     42441 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----ACG----GTCT--C--A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21687 36 -     29113 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----ACG----GTCT--C--A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24759 36 -     48123 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----ACG----GTCT--C--A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854485 36 -   1910179 cgtagctct-ag-gg------gctgcc-atttatgt------aga----gtct--g--a
i Solenodon_paradoxus.SolPar_flattened_line_126          I 4 C 0
s Spermophilus_dauricus.KZ294078.1                         1856581 36 +   3870691 catagttac-ag-g-------ctggtt-attcacatc-----aga----attg--a--t
i Spermophilus_dauricus.KZ294078.1                       I 956 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3106 36 -     97271 cacagctct-ag-gg------gttgcc-gttcatgtc-----agg----gtct--g---
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 4 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121075 36 +    196729 catagctgt-ag-ag------gttacc-attcatgtt-----aga----gttt--a---
i Suricata_suricatta.SurSur_flattened_line_6629          I 4 C 0
s Sus_scrofa.CM000828.4                                    6639811 37 +  69701581 cacaacact-gg-ag------ggtgat-gttcatgtc-----aga----gtct--a--a
i Sus_scrofa.CM000828.4                                  I 4 C 0
s Symphalangus_syndactylus.tarseq_199                       386933 36 +   1523678 CTCAGCTCT-GG-AG-------CTGCA-GGTGATGTC-----GGG----GTCT--C--A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                 987 37 -      2009 taaacctct-ag-ag------gttact-gctcatgtc-----aaa----gtcg--a--g
i Tamandua_tetradactyla.TamTet_scaffold_445853           I 4 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187581 36 +    199430 cacacctcc-ag-gg------gatgc-tgttcatgtg-----aga----gtct--a---
i Tapirus_indicus.TapInd_scaffold_7432                   I 4 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101536 36 -    539355 cacacctcc-ag-gg------gatgc-tgttcatgtg-----aga----gtct--a---
i Tapirus_terrestris.TapTer_scaffold_755                 I 4 C 0
s Tarsius_lariang.k141_1780720                                3595 41 +      6850 CACCTCCTC-TG-GC-------CTGCA-ACTTATTACCCCTGAAG----AGAT--G--G
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3680  9 +     20590 CATTTTCTC--------------------------------------------------
i Tarsius_wallacei.k141_226975                           C 0 I 117
s Theropithecus_gelada.CM009954.1                           349241 36 - 186847797 CTCAGCTCT-GG-AG-------CTGCT-GGTGAGGTC-----AGG----GTCT--C--A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16365 37 -     31044 tagatctct-ag-ag------gctgct-gttcatgtc-----cgt----gtct--a--g
i Tolypeutes_matacus.TolMat_scaffold_31955               I 4 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475659 38 -    610378 CACAGCTCT-CG--GG------CGGCT-GTTCATGCC-----AGA----GTCA--AGGC
i Tonatia_saurophila.TonSau_scaffold_294                 I 4 C 0
s Trachypithecus_auratus.k141_1189070                        16900 36 +     26378 CTCAGCTCT-GG-AG-------CTGCT-GGTGACGTC-----ACG----GTCT--C--A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29581 36 -     78344 CTCAGCTCT-GG-AG-------CTGCT-GGTGACGTC-----ACG----GTCT--C--A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16221 36 +     25722 CTCAGCTCT-GG-AG-------CTGCT-GGTGACGTC-----ACG----GTCT--C--A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24444 36 -     62838 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----ACG----GTCT--C--A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24563 34 +     46913 C--AGCTCT-GG-AG-------CTGCT-GGTGATGTC-----ACG----GTCT--C--A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5371 36 -     28527 CTCAGCTCT-GG-AG-------CTGCT-GGTGACGTC-----ACG----GTCT--C--A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26383 36 -     64340 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----ACG----GTCT--C--A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24420 36 -     63452 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----ACG----GTCT--C--A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5862 36 +     22490 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----ACG----GTCT--C--A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3482 36 +      4141 CTCAGCTCT-GG-AG-------CTGCT-GGTGACGTC-----ACG----GTCT--C--A
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6288 36 -     13050 CTCAGCTCT-GG-AG-------CTGCT-GGTGACGTC-----ACG----GTCT--C--A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251523 36 -   6242583 CTCAGCTCT-GG-AG-------CTGCT-GGTGATGTC-----ACG----GTCT--C--A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57257 34 +     59866 C--AGCTCT-GG-AG-------CTGCT-GGTGATGTC-----ACG----GTCT--C--A
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172009 36 -    200418 cacaacttg-ag--g------gctgct-gttcatgtc-----agt----gtcc--a--a
i Tragulus_javanicus.TraJav_scaffold_3462                I 4 C 0
s Tupaia_chinensis.KB320699.1                              1826100 35 -   4065304 CACAGAAC--AG-GGG------CTGCT-GTTCATGTC-----GA-----GCCT--A--G
i Tupaia_chinensis.KB320699.1                            I 4 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3500 35 -     70247 CACAGAAC--CG-GGG------CTGCT-GTTCATGTC-----GG-----GCCT--G--G
i Tupaia_tana.TupTan_flattened_line_394                  I 1 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359944 27 -  33153633 cacaactcc-ag-gg------gttgct-gttcatgt-----------------------
i Tursiops_truncatus.MRVK01000835.1                      I 4 I 4
s Uropsilus_gracilis.UroGra_scaffold_7153                   103741 35 -    105689 CACAGTTCT-AG-GG------ATTGTT-GCTCATGTC-----AG------CCT--T--G
i Uropsilus_gracilis.UroGra_scaffold_7153                I 4 C 0
s Ursus_maritimus.KK499267.1                                177727 36 +   5085361 cacagctcc-ag-gg------gttgcc-attcatgtc-----agg----gtct--a---
i Ursus_maritimus.KK499267.1                             I 4 C 0
s Varecia_rubra.k141_787544                                  21463 36 -     30710 CACAGGTCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Varecia_rubra.k141_787544                              I 1 C 0
s Varecia_variegata.k141_289850                              20371 36 -    147434 CACAGGTCT-AG-GG-------CTGCT-GTTCACGTC-----AAG----GTAT--G--G
i Varecia_variegata.k141_289850                          I 1 C 0
s Vicugna_pacos.KN270157.1                                   75018 37 +   5488506 cacagcttt-ag-gg------gttgtg-gttcatgtc-----aga----gtct--a--a
i Vicugna_pacos.KN270157.1                               I 4 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101122 36 -    112863 cacagctct-ag-ag------gttgcc-attcatatt-----aga----attt--a---
i Vulpes_lagopus.VulLag_flattened_line_12041             I 4 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162526 32 -    224448 ----GTTAC-AG-T-G------TGGTT-ATTCACATC-----AGA----ATCA--G--T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25010 36 -     86975 cacagcttt-ag-gg------gttgcc-attcatgtc-----aga----gtct--a---
i Zalophus_californianus.ZalCal_flattened_line_17732     I 4 C 0
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39076483 861 +  43346337 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        640 3 +     36723 GCA
s Acinonyx_jubatus.LLWD01001279.1                           809195 1 +   1699592 --g
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411087 1 +  29979442 --g
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                            212004 1 +    347723 --g
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   43949 3 +     53615 GCG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39764 3 +     44087 GCG
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68683 3 -     84148 GAG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40906 3 -     78289 GAG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40354 3 +     55831 GAG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38795 3 -     64179 GAG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20438 3 -     24835 GAG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37421 3 +     45454 GAG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43120 3 +     70886 GAG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5247 3 +     30854 GAG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29386 3 +     42133 GAG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583901 1 +   2318259 --g
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172666 1 -    412891 --C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 8
s Antilocapra_americana.AntAmePen_scaffold_21030             49000 1 -     68529 --g
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   47195 3 -     65372 GAG
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40941 3 +     43593 GAG
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668953 3 +   5030052 GAG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20595 3 -     23494 GAG
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5731 3 +      8415 GAG
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11902 3 -     32367 gtg
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       15833 3 -     45910 GGG
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   507 1 -     15198 --C
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 8
s Ateles_geoffroyi_b.tarseq_1536                               271181 3 +  21539123 GAG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7352 3 +     48076 GAG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2486 3 -     28759 GAG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30038 3 +     44353 GAG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45413 3 -     71267 GAG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19469 3 -     33135 GAG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2581 3 +     11645 GTG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2583 3 -     19611 GTG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955726 1 -  23207421 --g
i Balaenoptera_acutorostrata.KI537508.1                  I 4 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2934 1 -      4711 --g
i Balaenoptera_bonaerensis.DF507193.1                    I 4 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84896 1 +    124022 --g
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20429 1 +    288883 --g
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354816 1 +  48749331 --g
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753384 1 +   1948126 --g
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543523 1 -  45695690 --g
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528547 1 -   4408762 --g
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   4372 3 +     28062 GAG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39667 3 -     91139 GAG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17192 3 +     95584 GAG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17105 3 +    119600 GAG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6612 3 +     18648 GAG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6288 3 -     13885 GAG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14974 3 +     17162 GAG
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449930 3 + 189096842 GAG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16223 3 -     18408 GAG
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629717 1 +  17673402 --g
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664003 1 +   7040546 --g
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207663 1 +   1652518 --g
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501525 1 +  60362399 --g
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5155 1 -     23171 --g
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                          218516 1 +   9314153 --g
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            41611641 1 +  59632846 --g
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            45103211 1 -  63665305 --g
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Capra_aegagrus.CM003241.1                               27407612 1 -  46296322 --g
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589885 1 +  44709034 --g
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           266026 3 +    496798 AGG
i Carlito_syrichta.NW_007259797.1                        C 0 I 991
s Carollia_perspicillata.CarPer_scaffold_170178                553 1 +      5315 --C
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 8
s Catagonus_wagneri.CatWag_scaffold_2839                     75385 1 -    217609 --g
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1508 3 -     12580 GAG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39394 3 +     53515 GAG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367626 3 -  26074798 GAG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4515 3 -     34880 GAG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63610 3 -     89041 GAG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1275952                        14306 3 -     50533 AGG
i Cephalopachus_bancanus.k141_1275952                    C 0 N 0
s Ceratotherium_simum.JH767749.1                          15488594 1 -  27778364 --g
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15427 1 +     27315 --g
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 1
s Cercocebus_atys.KQ010504.1                                137109 3 -   4669795 GCG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40850 3 +     47900 GCG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40682 3 -     44860 GCG
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40664 3 -    148725 GCG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23723 3 -     40656 GCG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3658 3 +     20796 GCG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7913 3 -     17524 GCG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23602 3 -     34525 GCG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8313 3 -     25376 GCG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360878 3 -  39242232 GCG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266624 3 +  21565898 GCG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28076 3 -     45857 GCG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23867 3 -     32606 GCG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_1716667                      27658 3 +     27662 GTT
i Cercopithecus_petaurista.k141_1716667                  I 54 N 0
s Cercopithecus_pogonias.k141_6079                           21566 3 +     70610 GCG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18431 3 +     36323 GCG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9415 3 -     19938 gcg
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             26996 3 -     33796 GTG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1191 3 -     15404 GTG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5473 3 -     32913 GAG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15886 3 -     40346 GAG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16150 3 +    216457 GAG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15929 3 +     39636 GAG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            362 3 +      5346 GAG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39014 3 -    112038 GAG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4586 3 +     34062 GAG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339327 3 +  18827391 GCG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5938 3 -     44032 GCG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300653 3 - 135778131 GCG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405186 3 -   2368649 GCG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374345 3 - 200372422 GCG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5070 3 -      6605 GCG
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803496 3 +  53390261 GGG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               432 1 +     87169 --g
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Dasypus_novemcinctus.JH564415.1                          2105621 3 -   2246927 gag
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289024 3 +  12879189 GTG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624054 1 -  35494412 --g
i Delphinapterus_leucas.KZ290073.1                       I 4 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660881 1 -   1390856 --g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                  135673 1 -    198055 --g
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Elaphurus_davidianus.JRFZ01104969.1                       238287 1 -    607251 --g
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906553 1 +  41312741 --g
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                             12573823 1 +  14770903 --g
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037851 1 -   4378816 --g
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               21371785 1 +  39960074 --g
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                              408571 1 -    498745 --g
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erythrocebus_patas.Contig38                               258885 3 +  21539334 GCG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63605 1 -    133382 --g
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 4 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3821 1 +      7672 --g
i Eubalaena_japonica.EubJap_flattened_line_118172        I 4 C 0
s Eulemur_albifrons.k141_51491                               11986 3 -     24895 GTG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39698 3 -     70999 GTG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83658 3 +    112731 GTG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40230 3 +     68309 GTG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50555 3 -     65740 GTG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21185 3 -     75513 GTG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45378 3 -     97555 GTG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2105 3 +     30972 GTG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39828 3 -     52037 GTG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56229 3 -    111500 GTG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242854 1 - 206538554 --g
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                          185112636 1 - 205367284 --g
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_31944                 23984 1 -     30238 --g
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 1
s Galago_moholi.ctg3793                                     119414 3 -    137831 GGG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             2954 3 +     22493 GGG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            15147 3 -     32986 GGG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15201 3 +     18121 gcg
i Galeopterus_variegatus.GalVar_scaffold_74466           I 38 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89966 1 -     95226 --g
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Gorilla_beringei.k141_3358147                                991 3 -      8343 GCA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250491 3 - 186649187 GCA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11919 3 -     40692 GTG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33321 3 +     49394 GTG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58189 3 -     66874 GTG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7066 3 -     42923 GTG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14062 3 -     53142 GTG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26748 1 -    327341 --g
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7719 1 +     48891 --g
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6318 1 -     36432 --a
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138387 3 -    630532 GTG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65427 1 +     83186 --g
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 1
s Hylobates_agilis.k141_1155965                               1420 3 +     12352 GTG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8603 3 +     55766 GTG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047942 3 + 191637585 GTG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797274 3 +  11177569 GTG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375284 3 +   7955117 gtg
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                      68 3 -      1527 GTG
i Indri_indri.k141_4600452                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1841 1 -     16823 --g
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 4 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64330 1 -     97402 --g
i Kogia_breviceps.KogBre_flattened_line_3970             I 4 C 0
s Lagothrix_lagothricha.k141_246028                          39728 3 +    110728 GCG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14756711 3 +  30322482 GTG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         433 3 -     13097 GAG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            384 3 +      5940 GAG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                          15 3 -      5717 GAG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6637 3 -     11567 GAG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8018 3 -     12945 GAG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5359 3 +     29618 GTG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5356 3 +     31569 GTG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5366 3 +     24756 GTG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5361 3 +     16388 GTG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809646 1 -   3914936 --g
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lipotes_vexillifer.KE559953.1                             333364 1 +    662738 --g
i Lipotes_vexillifer.KE559953.1                          I 4 C 0
s Lophocebus_aterrimus.ctg367                               329065 3 -   1826925 GCG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2391 3 +     19643 GGA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036049 3 -   6120653 GGA
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41610796 1 +  59628241 --g
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_1757516                              41345 3 -     61512 GCG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368973 3 -  60120075 GCG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21293 3 +     30207 GCG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18396 3 -     24934 GCG
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21180 3 +     30527 GCG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32369 3 -     50087 GCG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42107 3 +     51645 GCG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410681 3 - 187317192 GCG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395564 3 +  25927173 GCG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44696 3 -     62418 GCG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21383 3 +     24253 GCG
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41140 3 +     59329 GCG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266972 3 +    668171 GCG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18318 3 +     21031 GCG
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32050 3 +     33478 GCG
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318448 3 +  24302211 GCG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353280 3 -    752769 GCG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670072 1 -    737560 --g
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                             217366 1 +    317179 --g
i Manis_pentadactyla.KN006162.1                          C 0 I 1
s Marmota_marmota.CZRN01000018.1                           7489377 3 +  40650429 gtg
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14571 1 -     74585 --g
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_6114                     79908 1 +     93471 --g
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 4 C 0
s Mico_argentatus.k141_582562                                 6396 3 +     17804 GAG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7169 3 -     12984 GAG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15131 3 -     26561 GAG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980959 3 +  93316391 GTG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180642 1 +    200668 --C
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 8
s Miopithecus_ogouensis.k141_1534655                         18438 3 -     27822 GCG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4656 1 +     27589 --g
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 1
s Mirza_zaza.k141_766280                                     48820 3 -     62432 GTG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351797 1 +    437263 --g
i Monodon_monoceros.MonMon_M_scaffold_103                I 4 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174811 1 +    366855 --G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22871 1 -     82753 --g
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14517 1 -     63510 --g
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 1
s Murina_feae.MurFea_scaffold_17764                          33746 1 +     47283 --g
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343608 1 +  14710649 --g
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myotis_brandtii.KE162005.1                               9788179 1 +  10118263 --g
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378590 1 +   6019432 --g
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               378410 1 +   4330536 --g
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        2129 1 +      3929 --g
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116155 3 +    130748 gtg
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              24724 3 +     34575 GCG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465041 1 -  31847680 --g
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 1
s Neophocaena_asiaeorientalis.KZ687982.1                   1225966 1 -   7148211 --g
i Neophocaena_asiaeorientalis.KZ687982.1                 I 4 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   123018 1 -    149072 --G
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49672 3 -    132029 GTG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5768 3 -     16345 GTG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11651 3 +     22201 GTG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409988 3 -  22158432 GTG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22051 3 -     54323 GTG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194411 1 +   9404916 --g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                             93631165 3 + 196305487 GGA
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_3120371                              417 3 +      1915 GGA
i Nycticebus_coucang.k141_3120371                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559444 3 - 199412804 GGA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Odobenus_rosmarus.KB229312.1                             1447826 1 +   2017862 --g
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Odocoileus_virginianus.KZ100018.1                         434858 1 -    630418 --g
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12850 1 +    150152 --g
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8095236 1 +  10937097 --g
i Orcinus_orca.KB316932.1                                I 4 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35474 1 +    559221 --g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_85057                         22690 3 -     23432 GGG
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347255 3 +   1103335 GGG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402839 1 -  44047080 --g
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3358 1 +     17875 --g
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467880 3 - 189151597 GCA
i Pan_troglodytes.CM009242.2                             I 36 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20572 1 -    230217 --g
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                              18457898 1 -  18783137 --g
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               3968626 1 +   8748460 --g
i Panthera_tigris.KE722367.1                             C 0 I 1
s Pantholops_hodgsonii.KE114653.1                          1614282 1 +   2937107 --g
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   239292 3 - 183742232 GCG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5759 3 +     21308 GTG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286796 3 -  20919399 GCG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18412 3 -     27687 GCG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11548 3 +     16796 GCG
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18358 3 -     23640 GCG
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11489 1 +     78924 --g
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_1921260                          21254 3 +     31479 GGG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13625 3 -     24908 GGG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11094 1 -     15039 --g
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 4 C 0
s Piliocolobus_badius.k141_2495623                            5178 3 +      7560 GCG
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60885 3 -     63152 GCG
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43484 3 +     45295 GCG
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1163 3 +      5735 GCG
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46016 1 +     46691 --G
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61364 3 +    207309 GAG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2484 3 -     25401 GAG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28199 3 +     58159 GAG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28475 3 +     63561 GAG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28238 3 +     51148 GAG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553231 3 -   4542175 GAG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28222 3 +     51125 GAG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3178 1 -      8168 --g
i Platanista_gangetica.PlaMin_flattened_line_167872      I 4 C 0
s Plecturocebus_bernhardi.k141_2549090                        4648 3 +     39866 GAC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39136 3 -     87950 GAC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39529 3 -     88961 GAC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4229 3 -     39403 GAC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39182 3 +     87928 GAC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4226 3 -     60166 GAC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11162 3 -     67232 GAC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39078 3 -     90634 GAC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40546 3 +     89403 GAC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173497 3 - 189387572 GCA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188495 3 -   9816681 GCA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23664 3 +     69807 GCG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40859 3 -     80239 GCG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979869 3 +   4620579 GTG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562446 3 -   2598838 GTG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                             92 3 -      7103 GTG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                              688 3 -     11706 GTG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4423 3 -     30655 GTG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30748 3 +     46564 GTG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91039 3 -     98465 GTG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4661 3 +     35169 GTG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47888 1 -     66298 --G
i Pteronotus_parnellii.KE847780.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4712 1 -     10349 --g
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 I 1
s Puma_concolor.QAVW01001104.1                            18095450 1 +  38429054 --g
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             23049 3 +     91421 GCG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  149541 3 -   7812017 GCG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              3919 3 +     72585 GCG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51779 1 +     55069 --g
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24882 3 +     27361 GCG
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118241 3 + 195417433 GCG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232490 3 -   7961872 GCG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                                360 3 +     27962 GAG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              360 3 +      6077 GAG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              381 3 +      5971 GAG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                433 3 +      5932 GAG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               584 3 -      2099 GAG
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387619 3 - 209938924 GAG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 384 3 +      5979 GAG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                                759 3 -      4301 GAG
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6422 1 +     16473 --g
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234850 3 +   5703754 GAG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4440 3 +     21866 GAG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112549 3 +    313613 GGG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21372 3 +     27374 GCG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24889 3 +     58920 GCG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11384 3 -     45317 GCG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19041 3 -     42441 GCG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21723 3 -     29113 GCG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24795 3 -     48123 GCG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854521 3 -   1910179 gtg
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1856617 3 +   3870691 gtg
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3142 1 -     97271 --g
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629             121111 1 +    196729 --g
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                    6639848 1 +  69701581 --a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386969 3 +   1523678 GTG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1024 3 -      2009 gtg
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187617 1 +    199430 --g
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    101572 1 -    539355 --g
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_1780720                                3636 3 +      6850 AGG
i Tarsius_lariang.k141_1780720                           C 0 I 128
s Theropithecus_gelada.CM009954.1                           349277 3 - 186847797 GCG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16402 2 -     31044 -tg
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475697 1 -    610378 --C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        16936 3 +     26378 GCG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29617 3 -     78344 GCG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16257 3 +     25722 GCG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24480 3 -     62838 GCG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24597 3 +     46913 GCG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5407 3 -     28527 GCG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26419 3 -     64340 GCG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24456 3 -     63452 GCG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5898 3 +     22490 GCG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3518 3 +      4141 GCG
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6324 3 -     13050 GCG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251559 3 -   6242583 GCG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57291 3 +     59866 GCG
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172045 1 -    200418 --g
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1826135 3 -   4065304 GAG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3535 3 -     70247 AAG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359975 1 -  33153633 --g
i Tursiops_truncatus.MRVK01000835.1                      I 4 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103776 3 -    105689 AAG
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177763 1 +   5085361 --g
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_787544                                  21499 3 -     30710 GTG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20407 3 -    147434 GTG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75055 1 +   5488506 --g
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101158 1 -    112863 --g
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 1
s Xerus_inauris.XerIna_scaffold_2302                        162558 3 -    224448 GCT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25046 1 -     86975 --g
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
e Allochrocebus_solatus.k141_3554717                         14582 0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904 0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tarsius_wallacei.k141_226975                                3689 117 +     20590 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70829 0 -    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                       2909425 0 +   3329780 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Pteropus_vampyrus.KN525825.1                             3533359 0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5836784 0 -  28871421 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       146364 0 +    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                219311 0 -    270270 C
e Loxodonta_africana.GL010049.1                           39076483 861 +  43346337 I
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_galeritus.HipGal_scaffold_23202               45438 0 +     49977 C
e Hipposideros_armiger.JXIK01000431.1                      1546129 0 -   1711038 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Eidolon_helvum.AWHC01266696.1                               2239 0 +     19438 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_101005          8901 0 +     10921 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        643 17 +     36723 A--ACAAGAC-C-CCTC-AAA----------G
s Acinonyx_jubatus.LLWD01001279.1                           809197 20 +   1699592 tgaatgaca-ttaatct-agg----------a
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411089 19 +  29979442 tgaatgata-tc-catc-agc----------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                            212006 19 +    347723 ggaatgata-tc-cctc-agt----------a
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43952 17 +     53615 G--ACAAGAC-C-CCTC-AGA----------G
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39767 17 +     44087 A--ACAAGAC-C-CCTC-AGA----------G
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68686 17 -     84148 A--CTGAGGC-C-CCTC-GGA----------G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40909 17 -     78289 A--CTGAGGC-C-CCTC-GGA----------G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40357 17 +     55831 A--CTGAGGC-C-CCTC-GGA----------G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38798 17 -     64179 A--CTGAGGC-C-CCTC-GGA----------G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20441 17 -     24835 A--CTGAGGC-C-CCTC-GGA----------G
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37424 17 +     45454 A--CTGAGGC-C-CCTC-GGA----------G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43123 17 +     70886 A--ATGAGGC-C-CCTC-GGA----------G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5250 17 +     30854 A--CTGAGGC-C-CCTC-GGA----------G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29389 17 +     42133 A--CTGAGGC-C-CCTC-GGA----------G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583902 19 +   2318259 tggacaatgc-c-cctc-aga----------a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172675  8 -    412891 -------------CCTC-ACA----------A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 8 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49001 19 -     68529 tgaatgatgc-c-cctc-aga----------a
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   47198 17 -     65372 A--ATGAGGC-C-CCTC-AGA----------G
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40944 17 +     43593 A--ATGAGGC-C-CCTC-AGA----------G
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668956 17 +   5030052 A--ATGAGGC-C-CCTC-AGA----------G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20598 17 -     23494 A--ATGAGGC-C-CCTC-AGA----------G
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5734 17 +      8415 A--ATGAGGC-C-CCTC-AGA----------G
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11905 17 -     32367 a--atgacac-c-tctc-aaa----------a
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       15836 17 -     45910 A--ATGACAT-C-CCTA-AGA----------C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   516  8 -     15198 -------------TCTC-ACA----------A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 8 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271184 17 +  21539123 A--ATGAGGC-C-CCTC-GGA----------G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7355 17 +     48076 A--ATGAGGC-C-CCTC-GGA----------G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2489 17 -     28759 A--ATGAGGC-C-CCTC-GGA----------G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30041 17 +     44353 A--ATGAGGC-C-CCTC-GGA----------G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45416 17 -     71267 A--ATGAGGC-C-CCTC-GGA----------G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19472 17 -     33135 A--ATGAGGC-C-CCTC-GGA----------G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2584 17 +     11645 A--AGGATAC-C-CCTG-AGA----------A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2586 17 -     19611 A--AGGATAC-C-CCTG-AGA----------A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955727 19 -  23207421 tgaatgatac-c-cctc-aga----------a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2935 19 -      4711 tgaatgatac-c-cctc-aga----------a
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84897 19 +    124022 tgaatgatac-c-cctc-aga----------a
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20430 19 +    288883 tgaatgatgc-c-cctc-aga----------a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354817 19 +  48749331 tgaatgatgc-c-cctc-aga----------a
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753385 19 +   1948126 tgaatgatgc-c-cctc-aga----------a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543524 19 -  45695690 tgaatgatgc-c-cctc-aga----------a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528548 19 -   4408762 tgaatgatgc-c-cctc-aga----------a
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   4375 17 +     28062 A--ATGAGGC-C-CCTC-AGA----------G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39670 17 -     91139 A--ATGAGGC-C-CCTC-AGA----------G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17195 17 +     95584 A--ATGAGGC-C-CCTC-AGA----------G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17108 17 +    119600 A--ATGAGGC-C-CCTC-AGA----------G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6615 17 +     18648 A--ATGAGGC-C-CCTC-AGA----------G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6291 17 -     13885 A--ATGAGGC-C-CCTC-CAA----------G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14977 17 +     17162 A--ATGAGGC-C-CCTC-AGA----------G
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449933 17 + 189096842 A--ATGAGGC-C-CCTC-AGA----------G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16226 17 -     18408 A--ATGAGGC-C-CCTC-AGA----------G
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629718 19 +  17673402 tgaatgatac-c-cctc-aga----------a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664004 19 +   7040546 tgaatgatac-c-cctc-aga----------a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207664 19 +   1652518 tgaatgatac-c-cctc-aga----------a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501527 19 +  60362399 agaatgata-ta-attt-ggc----------a
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5157 19 -     23171 agaatgata-ta-attt-ggc----------a
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218518 19 +   9314153 agaatgata-ta-attt-ggc----------a
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            41611643 19 +  59632846 agaatgata-ta-attt-ggc----------a
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            45103213 19 -  63665305 agaatgata-ta-attt-ggc----------a
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capra_aegagrus.CM003241.1                               27407613 19 -  46296322 tgaacgatgc-c-cctc-aga----------a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589886 19 +  44709034 tgaacgatgc-c-cctc-aga----------a
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267020 16 +    496798 A--ACGATGG-C-CC-C-TGA----------A
i Carlito_syrichta.NW_007259797.1                        I 991 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                562  8 +      5315 -------------CCTC-ACA----------A
i Carollia_perspicillata.CarPer_scaffold_170178          I 8 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75386 19 -    217609 tgaatgatgc-c-cctc-aga----------a
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1511 17 -     12580 A--ATGAGGC-C-CCTC-AGA----------G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39397 17 +     53515 A--ATGAGGT-C-CCTC-AGA----------G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367629  1 -  26074798 A-------------------------------
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4518  1 -     34880 A-------------------------------
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63613  1 -     89041 A-------------------------------
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            185 16 -      1636 a--acgatgg-t-cc-c-tga----------a
i Cephalopachus_bancanus.k141_72622                      N 0 C 0
s Ceratotherium_simum.JH767749.1                          15488596 18 -  27778364 tgaatggta--a-cctc-GGA----------A
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15429 18 +     27315 tgaatggta--a-cctc-GGA----------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 1 C 0
s Cercocebus_atys.KQ010504.1                                137112 17 -   4669795 A--ACAAGAC-C-CCTC-AGA----------G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40853 17 +     47900 A--ACAAGAC-C-CCTC-AGA----------G
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40685 17 -     44860 A--ACAAGAC-C-CCTC-AGA----------G
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40667 17 -    148725 A--ACAAGAC-C-CCTC-AGA----------G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23726 17 -     40656 A--ACAAGAC-C-CCTC-AGA----------G
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3661 17 +     20796 A--ACAAGAC-C-CCTC-AGA----------G
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7916 17 -     17524 A--ACAAGAC-C-CCTC-AGA----------G
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23605 17 -     34525 A--ACAAGAC-C-CCTC-AGA----------G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8316 17 -     25376 A--ACAAGAC-C-CCTC-AGA----------G
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360881 17 -  39242232 A--ACAAGAC-C-CCTC-AGA----------G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266627 17 +  21565898 A--ACAAGAC-C-CCTC-AGA----------G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28079 17 -     45857 A--ACAAGAC-C-CCTC-AGA----------G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23870 17 -     32606 A--ACAAGAC-C-CCTC-AGA----------G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                           60 16 +      8499 ---ACAAGAC-C-CCTC-AGA----------G
i Cercopithecus_petaurista.k141_42573                    N 0 C 0
s Cercopithecus_pogonias.k141_6079                           21569 17 +     70610 A--ACAAGAC-C-CCTC-AGA----------G
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18434 17 +     36323 A--ACAAGAC-C-CCTC-AGA----------G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9418 17 -     19938 a--atgatag-c-tttt-aga----------g
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             26999 17 -     33796 A--GCGATAC-C-CCTG-GGA----------A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1194 17 -     15404 A--GCGATAC-C-CCTG-AGA----------A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5476 16 -     32913 A--ATGAGGC-C-C-TC-ACA----------G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15889 16 -     40346 A--ATGAGGC-C-C-TC-ACA----------G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16153 16 +    216457 A--ATGAGGC-C-C-TC-ACA----------G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15932 16 +     39636 A--ATGAGGC-C-C-TC-ACA----------G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            365 17 +      5346 A--ATGAGGC-C-CCTC-CGA----------G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39017 17 -    112038 A--ATGAGGC-C-CCTC-AGA----------G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4589 17 +     34062 A--ATGAGGC-C-CCTC-AGA----------G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339330 17 +  18827391 A--ACAAGAC-C-CCTC-AGA----------G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5941 17 -     44032 A--ACAAGAC-C-CCTC-AGA----------G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300656 17 - 135778131 A--ACAAGAC-C-CCTC-AGA----------G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405189 17 -   2368649 A--ACAAGAC-C-CCTC-AGA----------G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374348 17 - 200372422 A--ACAAGAC-C-CCTC-AGA----------G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5073 17 -      6605 A--ACAAGAC-C-CCTC-AGA----------G
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803499 17 +  53390261 A--ACAGTTT-G-CCTC-AGA----------A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8901 16 +     10921 G--TTA-TGC-A-TGTC-AGA----------A
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               434 20 +     87169 tgaatgata-tt-ttctcagg----------a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Dasypus_novemcinctus.JH564415.1                          2105624 17 -   2246927 a--atgatag-c-tttt-aga----------a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289027 17 +  12879189 A--ATGATAT-G-CCTA-AGA----------A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624055 19 -  35494412 tgaatgatac-c-cctc-aga----------a
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660883 18 -   1390856 tgaatggta--c-cctc-gga----------a
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135675 18 -    198055 tgaatggta--a-cctc-GGA----------A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Eidolon_helvum.AWHC01266696.1                               2239 17 +     19438 A--TCAATAT-C-CCTC-AGA----------A
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238288 19 -    607251 tgaatgatgc-c-cccc-aga----------a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906555 19 +  41312741 tgagtgata-tc-cttc-aga----------a
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                             12573824 16 +  14770903 a---tgatac-c-cctc-cca----------a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037853 18 -   4378816 ggaatggta--c-cctc-aga----------a
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               21371787 18 +  39960074 ggaatggta--c-cctc-aga----------a
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                              408573 18 -    498745 ggaatggta--c-cctc-aga----------a
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erythrocebus_patas.Contig38                               258888 17 +  21539334 A--ACAAGAC-C-CCTC-AGA----------G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63606 19 -    133382 tgaatgatac-c-cctc-aga----------a
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3822 19 +      7672 tgaatgatac-c-cctc-aga----------a
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               11989 17 -     24895 G--ACGATAC-C-CGTA-AGA----------A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39701 17 -     70999 G--ACGATAC-C-CGTA-AGA----------A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83661 17 +    112731 G--ACGATAC-C-CGTG-AGA----------A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40233 17 +     68309 G--ACGATAC-C-CGTG-AGA----------A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50558 17 -     65740 G--ACGATAC-C-CGTA-AGA----------A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21188 17 -     75513 G--ACGATAC-C-CGTG-AGA----------A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45381 17 -     97555 G--ATGATAC-C-CGTG-AGA----------A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2108 17 +     30972 A--ACGATAC-C-CCTG-AGA----------A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39831 17 -     52037 G--ACGATAC-C-CGTA-AGA----------A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56232 17 -    111500 G--ATGATAC-C-CGTA-AGA----------A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242856 19 - 206538554 tgaatgata-tt-atcc-agg----------a
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                          185112638 19 - 205367284 tgaatgata-tt-atcc-agg----------a
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 23986 19 -     30238 tgaatgata-tt-atcc-agg----------a
i Felis_nigripes.FelNig_flattened_line_31944             I 1 C 0
s Galago_moholi.ctg3793                                     119417 17 -    137831 A--ATGACAT-C-CCCA-AGA----------A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             2957 17 +     22493 A--ATGACAT-C-CCCA-AGA----------A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            15150 17 -     32986 A--ATGACAT-C-CCCA-AGA----------A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15204 17 +     18121 a--gtgacac-c-cctc-aga----------a
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89967 19 -     95226 tgaatgatgc-c-cctc-aga----------a
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Gorilla_beringei.k141_3358147                                994 17 -      8343 A--ACGAGAC-C-CCTC-AAA----------G
i Gorilla_beringei.k141_3358147                          C 0 I 22
s Gorilla_gorilla.LT578341.1                                250494 17 - 186649187 A--ACGAGAC-C-CCTC-AAA----------G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          11922 17 -     40692 A--ACGATAC-C-CCTG-AGA----------A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33324 17 +     49394 A--ACGATAC-C-CCTG-AGA----------A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58192 17 -     66874 A--ACGATAC-C-CCTG-AGA----------A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7069 17 -     42923 A--ACGATAC-C-CCTG-AGA----------A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14065 17 -     53142 A--ACGATAC-C-CCTG-AGA----------A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26750 20 -    327341 tgaatgatc-tt-ttctcagg----------a
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7720 19 +     48891 tgaacgatgc-c-cctc-aga----------a
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6319 19 -     36432 tgaatgatac-c-cctc-aga----------a
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546129 16 -   1711038 g--ctg-tgc-a-tgtc-aGA----------A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45438 16 +     49977 g--ctg-tgc-a-tgtc-aGA----------A
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138390 17 -    630532 A--ATGAAAC-C-CCTC-AGA----------G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65429 20 +     83186 tgaatgata-ct-ttctcaga----------a
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1 C 0
s Hylobates_agilis.k141_1155965                               1423 17 +     12352 A--ATGAGAC-C-CCTC-AGA----------G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8606 17 +     55766 A--ATGAGAC-C-CCTC-AGA----------G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047945 17 + 191637585 A--ATGAGAC-C-CCTC-AGA----------G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797277 17 +  11177569 A--ATGAGAC-C-CCTC-AGA----------G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375287 17 +   7955117 a--aggataa-c-tctc-aaa----------a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                      71 17 -      1527 A--ACGATAC-C-CCTG-AGA----------A
i Indri_indri.k141_4600452                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1842 19 -     16823 tgaatgatac-c-cctc-aga----------a
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64331 19 -     97402 tgaatgatac-c-cctc-aga----------a
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39731 17 +    110728 A--ATGAGGC-C-CCTG-GGA----------G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14756714 17 +  30322482 A--ACGATAC-C-CCTG-AGA----------A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         436 17 -     13097 A--ATGAGGC-C-CCTC-AGA----------G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            387 17 +      5940 A--ATGAGGC-C-CCTC-AGA----------G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                          18 17 -      5717 A--ATGAGGC-C-CCTC-AGA----------G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6640 17 -     11567 A--ATGAGGC-C-CGTC-AGA----------G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8021 17 -     12945 A--ATGAGGC-C-CGTC-AGA----------G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5362 17 +     29618 A--GCGATAC-C-TCTG-AGA----------A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5359 17 +     31569 A--GCGATAC-T-TCTG-AGA----------A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5369 17 +     24756 A--GCGATAC-C-TCTG-AGA----------A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5364 17 +     16388 A--GCGATAC-C-TCTG-AGA----------A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809648 19 -   3914936 tgaatgata-tc-cctc-agc----------a
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lipotes_vexillifer.KE559953.1                             333365 19 +    662738 tgaatgatac-c-cctc-aga----------a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               329068 17 -   1826925 A--ACAAGAC-C-CCTC-AGA----------G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2394 17 +     19643 A--ACGACAT-C-CCTA-AGA----------A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036052 17 -   6120653 A--ACGACAT-C-CCTA-AGA----------A
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41610798 19 +  59628241 agaatgatc-ta-attt-ggc----------a
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_1757516                              41348 17 -     61512 A--ACAAGAC-C-CCTC-AGA----------G
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368976 17 -  60120075 A--ACAAGAC-C-CCTC-AGA----------G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21296 17 +     30207 A--ACAAGAC-C-CCTC-AGA----------G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18399 17 -     24934 A--ACAAGAC-C-CCTC-AGA----------G
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21183 17 +     30527 A--ACAAGAC-C-CCTC-AGA----------G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32372 17 -     50087 A--ACAAGAC-C-CCTC-AGA----------G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42110 17 +     51645 A--ACAAGAC-C-CCTC-AGA----------G
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410684 17 - 187317192 A--ACAAGAC-C-CCTC-AGA----------G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395567 17 +  25927173 A--ACAAGAC-C-CCTC-AGA----------G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44699 17 -     62418 A--ACAAGAC-C-CCTC-AGA----------G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21386 17 +     24253 A--ACAAGAC-C-CCTC-AGA----------G
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41143 17 +     59329 A--ACAAGAC-C-CCTC-AGA----------G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266975 17 +    668171 A--ACAAGAC-C-CCTC-AGA----------G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18321 17 +     21031 A--ACAAGAC-C-CCTC-AGA----------G
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32053 17 +     33478 A--ACAAGAC-C-CCTC-AGA----------G
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219311 17 -    270270 A--TCAATAT-C-TCTC-AGA----------A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318451 17 +  24302211 A--ACAAGAC-C-CCTC-AGA----------G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353283 17 -    752769 A--ACAAGAC-C-CCTC-AGA----------G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670074 19 -    737560 taaatcata-cc-cctc-aga----------t
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                             217368 19 +    317179 taaatcata-cc-cctc-aga----------c
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Marmota_marmota.CZRN01000018.1                           7489380 17 +  40650429 a--atgataa-c-tctc-aaa----------a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146364 15 +    207569 G--ACG-TGC-G-TG-C-AGA----------A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14573 19 -     74585 tgaatgata-tc-cttc-aga----------a
i Mellivora_capensis.MelCap_flattened_line_19308         I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79909 19 +     93471 tgaatgatac-c-cctc-aga----------a
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 6399 17 +     17804 A--ATGAGGC-C-CCTC-AGA----------G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7172 17 -     12984 A--ATGAGGC-C-CCTC-AGA----------G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15134 17 -     26561 A--ATGAGGC-C-CCTC-AGA----------G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980962 17 +  93316391 A--GCAGTAC-C-CCTG-AGA----------A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180651  8 +    200668 -------------CCTC-ACA----------G
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 8 C 0
s Miopithecus_ogouensis.k141_1534655                         18441 17 -     27822 A--ACAAGAC-C-CCTC-AGA----------G
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4658 19 +     27589 tgaatgata-tc-cctc-agc----------a
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 1 C 0
s Mirza_zaza.k141_766280                                     48823 17 -     62432 A--GCAATAC-C-CCTG-AGA----------A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351798 19 +    437263 tgaatgatac-c-cctc-aga----------g
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174812 17 +    366855 A--CGGATGC-C-CCTC-ACA----------G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22872 19 -     82753 tgaatgctgc-c-cttc-aga----------a
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14519 20 -     63510 tgaatgata-ct-gtctcagg----------a
i Mungos_mungo.MunMun_flattened_line_18455               I 1 C 0
s Murina_feae.MurFea_scaffold_17764                          33747 16 +     47283 a---tgagac-c-cctc-cca----------a
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343610 19 +  14710649 tgagtgata-tc-cttc-aga----------a
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myotis_brandtii.KE162005.1                               9788180 16 +  10118263 a---tgatac-c-cctc-cca----------a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378591 16 +   6019432 a---tgatac-c-cctc-cca----------a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               378411 16 +   4330536 a---tgatac-c-cctc-cca----------a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        2130 16 +      3929 a---tgatac-c-cctc-cca----------a
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116158 17 +    130748 a--atgatgg-c-cctc-agc----------a
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              24727 17 +     34575 A--ACAAGAC-C-CCTC-AGA----------G
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465043 19 -  31847680 tgaatgata-tc-cctc-agc----------a
i Neomonachus_schauinslandi.NINY01007730.1               I 1 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225967 19 -   7148211 tgaatgatac-c-tctc-aga----------a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   123019 17 -    149072 A--TCAGTAC-C-CCTC-ACA----------C
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49675 17 -    132029 A--ATGAGAC-C-CCTC-AGA----------G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5771 17 -     16345 A--ATGAGAC-C-CCTC-AGA----------G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11654 17 +     22201 A--ATGAGAC-C-CCTC-AGA----------G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8409991 17 -  22158432 A--ATGAGAC-C-CCTC-AGA----------G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22054 17 -     54323 A--ATGAGAC-C-CCTC-AGA----------G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194413 19 +   9404916 agaatgata-ta-attt-ggc----------a
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                             93631168 17 + 196305487 A--ACGACAT-C-CCTT-AGA----------A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3120371                              420 17 +      1915 A--ACGACAT-C-CCTT-AGA----------A
i Nycticebus_coucang.k141_3120371                        C 0 n 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559447 17 - 199412804 A--ACGACAT-C-CCTT-AGA----------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447828 19 +   2017862 tgaatgata-tc-cctc-agc----------a
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Odocoileus_virginianus.KZ100018.1                         434859 19 -    630418 tgaatgatgc-c-cctc-aga----------a
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12851 19 +    150152 tgaatgatgc-c-cctc-aga----------a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8095237 19 +  10937097 tgaatgatac-c-cctc-aga----------a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35476 19 +    559221 agaatgata-ta-attt-ggc----------a
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_85057                         22693 17 -     23432 A--ATGACAT-C-CCCA-AGA----------A
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347258 17 +   1103335 A--ATGACAT-C-CCCA-AGA----------A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402840 19 -  44047080 tgaacgatgc-c-cctc-aga----------a
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3359 19 +     17875 tgaacgatgc-c-cctc-aga----------a
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467883 17 - 189151597 A--ACGAGAC-C-CCTC-AAA----------G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20574 19 -    230217 tgaacgata-tt-ttct-agg----------a
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                              18457900 19 -  18783137 tgaacgata-tt-ttct-agg----------a
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               3968628 19 +   8748460 tgaacgata-tt-ttct-agg----------a
i Panthera_tigris.KE722367.1                             I 1 C 0
s Pantholops_hodgsonii.KE114653.1                          1614283 19 +   2937107 tgaatgatgc-c-cctc-aga----------a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   239295 17 - 183742232 A--ACAAGAC-C-CCTC-AGA----------G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5762 17 +     21308 A--ACAAGAC-C-CCTC-AGA----------G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286799 17 -  20919399 A--ACAAGAC-C-CCTC-AGA----------G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18415 17 -     27687 A--ACAAGAC-C-CCTC-AGA----------G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11551 17 +     16796 A--ACAAGAC-C-CCTC-AGA----------G
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18361 17 -     23640 A--ACAAGAC-C-CCTC-AGA----------G
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11491 20 +     78924 taaatgata-tt-ttctcagg----------a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_1921260                          21257 17 +     31479 A--ATGACAT-C-CCTA-AGA----------C
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13628 17 -     24908 A--ATGATAT-C-CCTA-AGA----------C
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11095 19 -     15039 tgaatgatac-c-tctc-aga----------a
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            5181 17 +      7560 A--ACAAGAC-C-CCTC-AGA----------G
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60888 17 -     63152 A--ACAAGAC-C-CCTC-AGA----------G
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43487 17 +     45295 A--ACAAGAC-C-CCTC-AGA----------G
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1166 17 +      5735 A--ACAAGAC-C-CCTC-AGA----------G
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46017 16 +     46691 A---GGATAC-C-ACTC-CCA----------A
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61367 17 +    207309 A--ATGAGGC-C-CCTC-AGA----------G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2487 17 -     25401 A--ATGAGGC-C-CCTC-AGA----------G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28202 17 +     58159 A--ATGAGGC-C-CCTC-AGA----------G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28478 17 +     63561 A--ATGAGGC-C-CCTC-AGA----------G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28241 17 +     51148 A--ATGAGGC-C-CCTC-AGA----------G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553234 17 -   4542175 A--ATGAGGC-C-CCTC-AGA----------G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28225 17 +     51125 A--ATGAGGC-C-CCTC-AGA----------G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3179 19 -      8168 tgaatgatac-c-cctc-aga----------g
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4651 16 +     39866 A--CTGAGGC-C-C-TC-GCA----------G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39139 16 -     87950 A--CTGAGGC-C-C-TC-GCA----------G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39532 16 -     88961 A--CTGAGGC-C-C-TC-GCA----------G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4232 16 -     39403 A--CTGAGGC-C-C-TC-GCA----------G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39185 16 +     87928 A--CTGAGGC-C-C-TC-GCA----------G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4229 16 -     60166 A--CTGAGGC-C-C-TC-GCA----------G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11165 16 -     67232 A--CTGAGGC-C-C-TC-GCA----------G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39081 16 -     90634 A--CTGAGGC-C-C-TC-GCA----------G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40549 16 +     89403 A--CTGAGGC-C-C-TC-GCA----------G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173500 17 - 189387572 A--ACAAGAC-C-CCTC-AAA----------G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188498 17 -   9816681 A--ACAAGAC-C-CCTC-AAA----------G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23667 15 +     69807 A--ACAAGAC-C-CCTC---A----------G
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40862 15 -     80239 A--ACAAGAC-C-CCTC---A----------G
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979872 17 +   4620579 A--ACGATAC-C-CCTG-AGA----------A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562449 17 -   2598838 A--ACGATAT-C-CCTG-AGA----------A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                             95 17 -      7103 A--ACGATAT-C-CCTG-AGA----------A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                              691 17 -     11706 A--ACGGTAT-C-CCTG-AGA----------A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4426 17 -     30655 A--ACGATGT-C-CCTG-AGA----------A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30751 17 +     46564 A--ACGATGT-C-CCTG-AGA----------A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91042 17 -     98465 A--ACGATGT-C-CCTG-AGA----------A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4664 17 +     35169 A--ACGATAT-C-CCTG-AGA----------A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47889 16 -     66298 A--CC-ACCC-G-CCTC-ACA----------G
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4714 19 -     10349 tgagtgata-tc-cttc-aga----------a
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 1 C 0
s Pteropus_alecto.KB030862.1                               5836784 17 -  28871421 A--TCAATAT-C-CCTC-AGA----------A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533359 17 -   4952924 A--TCAATAT-C-CCTC-AGA----------A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095452 19 +  38429054 tgaatgata-tt-ttct-agg----------a
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             23052 17 +     91421 A--ACAAGAC-C-CCTC-AGA----------G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  149544 17 -   7812017 A--ACAAGAC-C-CCTC-AGA----------G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              3922 16 +     72585 A--ACAAGAC-C-C-TC-AGA----------G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51780 19 +     55069 tgaatgatgc-c-cctc-aga----------a
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909425 16 +   3329780 g--ctg-tgc-a-tgtc-aaa----------a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24885 17 +     27361 A--ACAAGAC-C-CCTC-AGA----------G
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118244 17 + 195417433 A--ACAAGAC-C-CCTC-AGA----------G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232493 17 -   7961872 A--ACAAGAC-C-CCTC-AGA----------G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70829 17 -    116970 A--TCAATAT-C-TCTC-CGA----------A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                363 17 +     27962 A--ATGAGGC-C-CCTC-CGA----------G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              363 17 +      6077 A--ATGAGGC-C-CCTC-CGA----------G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              384 17 +      5971 A--ATGAGGC-C-CCTC-GGA----------G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                436 17 +      5932 A--ATGAGGC-C-CCTC-AGA----------G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               587 17 -      2099 A--ATGAGGC-C-CCTC-GGA----------G
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387622 17 - 209938924 A--ATGAGGC-C-CCTC-CGA----------G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 387 17 +      5979 A--ATGAGGC-C-GCTC-GGG----------G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                                762 17 -      4301 A--ATGAGGC-C-CCTC-CGA----------G
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6423 29 +     16473 cgaatgatgc-c-cctc-agagtCCAAGCAAA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234853  1 +   5703754 A-------------------------------
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4443  1 +     21866 A-------------------------------
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112552 17 +    313613 A--ATGATTC-T-CCTC-AGA----------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21375 17 +     27374 A--ACAAGAC-C-CCTC-AGA----------G
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24892 17 +     58920 A--ACAAGAC-C-CCTC-AGA----------G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11387 17 -     45317 A--ACAAGAC-C-CCTC-AGA----------G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19044 17 -     42441 A--ACAAGAC-C-CCTC-AGA----------G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21726 17 -     29113 A--ACAAGAC-C-CCTC-AGA----------G
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24798 17 -     48123 A--ACAAGAC-C-CCTC-AGA----------G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854524 17 -   1910179 a--ctggatt-c-cctc-ata----------c
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1856620 17 +   3870691 a--atgataa-c-tctc-aaa----------a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3144 19 -     97271 tgaatgatg-cc-tctc-agc----------a
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121113 20 +    196729 tgaatgata-tt-gtctcagg----------a
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                    6639849 19 +  69701581 tgaatgatac-c-cctc-aga----------a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386972 17 +   1523678 A--AAGAGAC-C-CTTC-AGA----------G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1027 17 -      2009 a--atgatga-t-cctc-agc----------a
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187619 18 +    199430 tgaatggta--c-cctc-aga----------a
i Tapirus_indicus.TapInd_scaffold_7432                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101574 18 -    539355 tgaatggta--c-cctc-aaa----------a
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_1780720                                3767 16 +      6850 a--atgatgc-c-cc-c-tga----------a
i Tarsius_lariang.k141_1780720                           I 128 C 0
s Tarsius_wallacei.k141_226975                                3806 16 +     20590 a--atgatgc-c-cc-c-tga----------a
i Tarsius_wallacei.k141_226975                           I 117 C 0
s Theropithecus_gelada.CM009954.1                           349280 17 - 186847797 A--ACAAGAC-C-CCTC-AGA----------G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16404 17 -     31044 a--atgagaa-c-tttt-aga----------g
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475698  8 -    610378 A--CTGATAC----------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 8
s Trachypithecus_auratus.k141_1189070                        16939 17 +     26378 A--ACAAGAC-C-CCTC-AGA----------G
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29620 17 -     78344 A--ACAAGAC-C-CCTC-AGA----------G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16260 17 +     25722 A--ACAAGAC-C-CCTC-AGA----------G
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24483 17 -     62838 A--ACAAGAC-C-CCTC-AGA----------G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24600 17 +     46913 A--ACAAGAC-C-CCTC-AGA----------G
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5410 17 -     28527 A--ACAAGAC-C-CCTC-AGA----------G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26422 17 -     64340 A--ACAAGAC-C-CCTC-AGA----------G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24459 17 -     63452 A--ACAAGAC-C-CCTC-AGA----------G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5901 17 +     22490 A--ACAAGAC-C-CCTC-AGA----------G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3521 17 +      4141 A--ACAAGAC-C-CCTC-AGA----------G
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6327 17 -     13050 A--ACAAGAC-C-CCTC-AGA----------G
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251562 17 -   6242583 A--ACAAGAC-C-CCTC-AGA----------G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57294 17 +     59866 A--ACAAGAC-C-CCTC-AGA----------G
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172046 19 -    200418 tgaaggatag-c-cctt-aga----------a
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1826138 17 -   4065304 A--ATGATAC-C-CTTC-GGT----------A
i Tupaia_chinensis.KB320699.1                            C 0 I 50
s Tupaia_tana.TupTan_flattened_line_394                       3538 17 -     70247 A--ATGATAC-T-CCTC-GGT----------A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359976 19 -  33153633 tgaatgatac-c-cctc-aga----------a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103779 17 -    105689 A--ACAAATC-C-TCTC-ATA----------G
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177765 19 +   5085361 tgaatgata-tc-cctc-agc----------a
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_787544                                  21502 17 -     30710 A--ACGATAC-C-CCTG-AGA----------A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20410 17 -    147434 A--ACGATAC-C-CCTG-AGA----------A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75056 19 +   5488506 tgaatgatac-c-cctc-aga----------a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101160 19 -    112863 agaatgata-ta-attt-ggc----------a
i Vulpes_lagopus.VulLag_flattened_line_12041             I 1 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162561 17 -    224448 A--ATGATAA-C-TCTC-AGA----------A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25048 19 -     86975 tgaatgata-tc-cctc-agc----------a
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39076483 861 +  43346337 I
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        660 22 +     36723 T--TGAAA--AC-TGTACAAA---CATC----------G----T
s Acinonyx_jubatus.LLWD01001279.1                           809217 28 +   1699592 t--tgtga--at-tgtacaaa---ctgc----gtggctg----t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411108 28 +  29979442 t--tgtga--at-tgtacaaa---ctgc----atatctg----t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            212025 28 +    347723 t--tgtga--at-tctacaga---ctgc----atatctg----t
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   43969 22 +     53615 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39784 22 +     44087 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68703 25 -     84148 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40926 25 -     78289 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40374 25 +     55831 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38815 25 -     64179 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20458 25 -     24835 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37441 25 +     45454 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43140 25 +     70886 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5267 25 +     30854 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29406 25 +     42133 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583921 16 +   2318259 c--tgtgc--ac-tgtaaaga-----------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172683 28 -    412891 C--TGTGA--AC-TGCACCGA---CTGCA---C-GGCTC----T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_21030             49020 16 -     68529 c--tgtga--ac-tgtaAAGT-----------------------
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   47215 25 -     65372 G--TGAAA--AC-TGTACAAATGGCATT----------A----T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             40961 25 +     43593 G--TGAAA--AC-TGTACAAATGGCATT----------A----T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                668973 25 +   5030052 G--TGAAA--AC-TGTACAAATGGCATT----------A----T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20615 25 -     23494 G--TGAAA--AC-TGTACAAATGGCATT----------A----T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5751 25 +      8415 G--TGAAA--AC-TGTACAAATGGCATT----------A----T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11922 20 -     32367 t--tgtgA--AT-CGTAAAAG---CATG----------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 5
s Arctocebus_calabarensis.k141_1364444                       15853 22 -     45910 C--TCAGC--AC-TGTACAAG---CCAC----------G----C
i Arctocebus_calabarensis.k141_1364444                   C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   524 28 -     15198 C--ACTGA--AC-TGTGTCAG---CCACATG---G-CTC----T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 1
s Ateles_geoffroyi_b.tarseq_1536                               271201 25 +  21539123 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7372 25 +     48076 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2506 25 -     28759 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30058 25 +     44353 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45433 25 -     71267 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19489 25 -     33135 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2601 28 +     11645 G--TGAGC--AT-TGCATAGA---CCACATGTCT----G----T
i Avahi_laniger.k141_2756659                             C 0 I 15
s Avahi_peyrierasi.k141_1823318                               2603 28 -     19611 G--TGAGC--AT-TGCATAGA---CCGCATGTCT----G----T
i Avahi_peyrierasi.k141_1823318                          C 0 I 15
s Balaenoptera_acutorostrata.KI537508.1                    7955746 16 -  23207421 c--tgtga--at-tgtaaaga-----------------------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2954 16 -      4711 c--tgtga--at-tgtaaaga-----------------------
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84916 16 +    124022 c--tgtgc--aC-TATAAAGA-----------------------
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20449 16 +    288883 t--tgtgc--ac-tgtaaaga-----------------------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354836 16 +  48749331 c--tgtgc--ac-tgtaaaga-----------------------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753404 16 +   1948126 c--tgtgc--ac-tgtaaaga-----------------------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543543 16 -  45695690 c--tgtgc--ac-tgtaaaga-----------------------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528567 16 -   4408762 t--tgtgc--ac-tgtaaaga-----------------------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   4392 26 +     28062 G--TGAAA--ACTTGTACAAATGGCATT----------A----T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39687 25 -     91139 G--TGAAA--AC-TGTACAAATGGCATT----------A----T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17212 26 +     95584 G--TGAAA--ACTTGTACAAATGGCATT----------A----T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17125 26 +    119600 G--TGAAA--ACTTGTACAAATGGCATT----------A----T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6632 25 +     18648 G--TGAAC--AC-TGTACAAAAGCCATC----------A----T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6308 25 -     13885 G--TGAAC--AC-TGTACAAAAGTCATT----------A----T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           14994 25 +     17162 G--TGAAC--AC-TGTACAAAAGCCATC----------A----T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165449950 25 + 189096842 G--TGAAC--AC-TGTACAAAAGCCATC----------A----T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16243 25 -     18408 G--TGAAC--AC-TGTACAAAAGCCATC----------A----T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629737 15 +  17673402 t--tgtga--at-tacaaa-a-----------------------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664023 15 +   7040546 t--tgtga--at-tacaaa-a-----------------------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207683 15 +   1652518 t--tgtga--at-tacaaa-a-----------------------
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42501546 28 +  60362399 t--tgtga--at-tatacaaa---ctgc----atatctg----t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5176 28 -     23171 t--tgtga--at-tatacaaa---ctgc----atatctg----t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218537 28 +   9314153 t--tgtga--at-tatacaaa---ctgc----atatctg----t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41611662 28 +  59632846 t--tgtga--at-tatacaaa---ctgc----atatctg----t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45103232 28 -  63665305 t--tgtga--at-tatacaaa---ctgc----atatctg----t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407632 16 -  46296322 c--tgtgc--ac-tgtaaaga-----------------------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589905 16 +  44709034 c--tgtgc--ac-tgtaaaga-----------------------
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267036 20 +    496798 T--TGTGA--AT-TGCAAA-----CATT----------G----C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                570 28 +      5315 C--TGTGA--GC-CATACGGA---CTGCATG---G-CCC----T
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     75405 16 -    217609 t--tgtgc--aa-tgtaAAGA-----------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           1528 25 -     12580 G--TGAAC--AC-TGTACAAAAGCCATC----------A----T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39414 25 +     53515 G--TGAAC--AC-TGTACAAAAGCCATC----------A----T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367630 24 -  26074798 ---TGAAA--AC-TGTACAAATGACATT----------A----T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4519 24 -     34880 ---TGAAA--AC-TGTACAAATGACATT----------A----T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63614 24 -     89041 ---TGAAA--AC-TGTACAAATGACATT----------A----T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            201 20 -      1636 t--tgtga--at-tgcaca-----cgtt----------g----c
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488614 28 -  27778364 A--GGTGG--AT-TGTACATA---GTGCATG---G-CTC----C
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15447 28 +     27315 A--GGTGG--AT-TGTACATA---GTGCATG---G-CTC----C
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137129 22 -   4669795 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40870 22 +     47900 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40702 22 -     44860 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40684 22 -    148725 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23743 22 -     40656 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3678 22 +     20796 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             7933 22 -     17524 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23622 22 -     34525 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8333 22 -     25376 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360898 22 -  39242232 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266644 22 +  21565898 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28096 22 -     45857 T--TGAAA--AC-TGTACAAA---CGTG----------G----T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23887 22 -     32606 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                           76 22 +      8499 T--TGAAA--AC-TGTACAAA---CATG----------A----T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21586 22 +     70610 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18451 22 +     36323 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9435  5 -     19938 a--tgtg-------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             27016 27 -     33796 ---TGAGC--AC-TGCACAGA---CTGC--GT--GTCTG----T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1211 27 -     15404 ---TGAGC--AT-TGCACAGA---CTGC--GT--GTCTG----T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5492 25 -     32913 G--TGAAA--CC-TGTACAAATGGCATT----------T----T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15905 25 -     40346 G--TGAAA--CC-TGTACAAATGGCATT----------T----T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16169 25 +    216457 G--TGAAA--CC-TGTACAAATGGCATT----------T----T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           15948 25 +     39636 G--TGAAA--CC-TGTATAAATGGCATT----------T----T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            382 25 +      5346 G--TGAAA--AC-TGTGCAAACGGCATT----------A----C
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39034 25 -    112038 G--TGCAA--AC-TGTACAAATGGCATT----------A----T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4606 25 +     34062 G--TGCAA--AC-TGTACAAATGGCATT----------A----T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339347 22 +  18827391 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        5958 22 -     44032 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300673 22 - 135778131 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405206 22 -   2368649 T--TGAAA--AC-TGTACGAA---CATC----------G----T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374365 22 - 200372422 T--TGAAA--AC-TGTACGAA---CATC----------G----T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5090 22 -      6605 C--TGAAA--AC-TGTACGAA---CATC----------G----T
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803516 28 +  53390261 CAGT--GA--AC-TGTGCAGA---CTGCATG---G-CCA----T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8917 28 +     10921 T--TGTCG--AT-TGTACCAA---CTGCATG---G-CTG----T
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               454 28 +     87169 t--tgtga--at-tgtacaaa---ctgc----atggctg----t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2105641  5 -   2246927 a--tgtg-------------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289044 28 +  12879189 T--TGAGC--CT-TGTGCAAA---CCACATGTCT----G----T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624074 16 -  35494412 c--tgtga--at-tgtaaaga-----------------------
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660901 28 -   1390856 t--tgtgg--at-tgtacata---ctgc----atggctc----t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135693 28 -    198055 A--GGTGG--AT-TGTACATA---GTGCATG---G-CTC----C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2256 28 +     19438 C--TGCAA--AT-TGTACAAA---ACGCATG----gcta----t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238307 16 -    607251 t--tgtga--ac-tataaaga-----------------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24906574 28 +  41312741 t--tgtga--tt-tctataga---ttgc----atatctg----t
i Enhydra_lutris.KZ291758.1                              C 0 I 20
s Eptesicus_fuscus.JH977646.1                             12573840 28 +  14770903 c--tgtga--gt-tgtacaaa---ctgt----atggttg----t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037871 28 -   4378816 g--tgtga--ac-tatacgca---ctgc----agggctc----c
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21371805 28 +  39960074 g--cgtga--ac-tatatgca---ctgc----agggctc----c
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408591 28 -    498745 g--cgtga--ac-tatatgca---ctgc-aG--GGT-TC----C
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               258905 22 +  21539334 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63625 16 -    133382 c--tgtga--at-tgtaaaga-----------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3841 16 +      7672 c--tgtga--at-tgtaAAGA-----------------------
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               12006 32 -     24895 T--TGAGC--AT-TGCACAGA---CTGCATGTCT----GTCTGT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39718 32 -     70999 T--TGAGC--AT-TGCACAGA---CTGCATGTCT----GTCTGT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83678 32 +    112731 T--TGAGC--AT-TGCACAGA---CTGCATG---G-CTGTCTGT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40250 32 +     68309 T--TGAGC--AT-TGCACAGA---CTGCATGTCT----GTCTGT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50575 32 -     65740 T--TGAGC--AT-TGCACAGA---CTGCATGTCT----GTCTGT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21205 32 -     75513 T--TGAGC--AT-TGCACAGA---CTGCATGTCT----GTCTGT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45398 32 -     97555 T--TGAGC--AT-TGCACAGA---CTGCATGTCT----GTCTGT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2125 32 +     30972 T--TGAGC--AT-TGCACAGA---CTAC----CTGTCTGTCTGT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39848 32 -     52037 T--TGAGC--AT-TGCACAGA---CTGCATGTCT----GTCTGT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56249 32 -    111500 T--TGAGC--AT-TGCACAGA---CTGC--GT--GTCTGTCTGT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242875 28 - 206538554 t--tgtga--at-tgtaccaa---ccgc----gtggctg----t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112657 28 - 205367284 t--tgtga--at-tgtaccaa---ccac----gtggctg----t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24005 28 -     30238 t--tgtga--at-tgtaccaa---ccgc----gtggctg----t
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     119434 22 -    137831 C--TCAGC--AC-TGTACAAG---CTGT----------G----T
i Galago_moholi.ctg3793                                  C 0 I 2
s Galago_senegalensis.k141_991736                             2974 22 +     22493 C--TCAGC--AC-TGTACAAG---CTGT----------G----T
i Galago_senegalensis.k141_991736                        C 0 I 2
s Galagoides_demidoff.k141_561628                            15167 22 -     32986 C--TCAGC--AC-TGTACAAG---CCAC----------G----T
i Galagoides_demidoff.k141_561628                        C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_74466               15221 28 +     18121 c--tgtga--at-tatacaaa---ttgc----acatttg----t
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 52
s Giraffa_tippelskirchi.LVKQ01S015573.1                      89986 16 -     95226 t--tgtga--ac-tgtaaaga-----------------------
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Gorilla_beringei.k141_3358224                               1017 22 -      1229 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Gorilla_beringei.k141_3358224                          I 56 I 52
s Gorilla_gorilla.LT578341.1                                250511 22 - 186649187 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Gorilla_gorilla.LT578341.1                             C 0 I 46
s Hapalemur_alaotrensis.k141_330369                          11939 30 -     40692 T--TGAGCTTTT-TGCACAGA---CTCCATGTCT----T----G
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33341 30 +     49394 T--TGAGCTTTT-TGCACAGA---CTCCATGTCT----T----T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58209 30 -     66874 T--TGAGCTTTT-TGCACAGA---CTCCATGTCT----T----G
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7086 30 -     42923 T--TGAGCTTTT-TGCACAGA---CTCCATGTCT----T----G
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14082 30 -     53142 T--TGAGCTTTT-TGCACAGA---CTCCATGTCT----T----T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26770 28 -    327341 t--tgtga--ac-tgtacaaa---ccgc----gtggctg----t
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7739 16 +     48891 c--tatgc--ac-tgtaAAGA-----------------------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6338 16 -     36432 t--tgtga--at-tgtaAAGA-----------------------
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546145 28 -   1711038 T--TGTGA--AT-TGTACAAA---CTTCATG---G-CTG----T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45454 28 +     49977 T--TGTGA--AT-TGTACAAA---CTTCATG---G-CTG----T
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138407 22 -    630532 T--CGAAA--AC-TGTACAAA---CATC----------G----T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65449 28 +     83186 t--tgtga--at-agtacaaa---ctgc----atggctg----t
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               1440 22 +     12352 T--CGAAA--AC-TGTACAAA---CATC----------G----T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8623 22 +     55766 T--CGAAA--AC-TGTACAAA---CATC----------G----T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2047962 22 + 191637585 T--CAAAA--AC-TGTACAAA---CATC----------G----T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797294 22 +  11177569 T--CAAAA--AC-TGTACAAA---CATC----------G----T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375304 20 +   7955117 c--tgtaa--at-tgtatgaa---cttc----------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 8
s Indri_indri.k141_4600452                                      88 28 -      1527 G--TGAGC--AT-TGCATAGA---CTGC--GT--GTCTG----T
i Indri_indri.k141_4600452                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1861 16 -     16823 c--tgtga--at-tgtaAAGA-----------------------
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64350 16 -     97402 c--tgtga--at-tgtaAAGA-----------------------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39748 25 +    110728 G--TGAAA--AC-TGTGCAAATGGCATT----------A----C
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14756731 30 +  30322482 T--TGAGCTTTT-TGCACAGA---CTCCATGTCT----T----T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         453 25 -     13097 G--TGAAA--AC-TGTACAAACGGCATT----------A----T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            404 25 +      5940 G--TGAAA--AC-TGTACAAATGGCATT----------A----T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                          35 25 -      5717 G--TGAAA--AC-TGTACAAACGGCATT----------A----T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6657 24 -     11567 G--TGAAA---C-TGTGCAAACGGCATT----------A----T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8038 24 -     12945 G--TGAAA---C-TGTGCAAACGGCATT----------A----T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5379 27 +     29618 ---TGAGC--AT-CGCACAGA---CTGC--GT--GTCTG----C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5376 27 +     31569 ---TGAGC--AT-CGCACAGA---CTGA--GT--GTCTG----C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5386 27 +     24756 ---TGAGC--AT-TGCACAGA---CTGCATGTCT----G----C
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5381 27 +     16388 ---TGAGC--AT-CGCACAGA---CTGC--GT--GTCTG----C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809667 28 -   3914936 t--tgtga--at-tgtacaaa---ctgc----atatctg----t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333384 16 +    662738 c--tgtga--ac-tgtaaaga-----------------------
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               329085 22 -   1826925 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2411 22 +     19643 C--TCAGC--AC-TGTACAAG---CCAT----------G----T
i Loris_lydekkerianus.k141_2031736                       C 0 I 2
s Loris_tardigradus.ctg83                                  5036069 22 -   6120653 C--TCAGC--AC-TGTACAAG---CCAT----------G----T
i Loris_tardigradus.ctg83                                C 0 I 2
s Lycaon_pictus.CM007581.1                                41610817 28 +  59628241 t--tgtga--at-tatacaaa---ctgc----atatctg----t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              41365 22 -     61512 T--TGAAA--AC-TGTACAAA---CGTC----------G----T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 368993 22 -  60120075 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21313 22 +     30207 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18416 22 -     24934 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21200 22 +     30527 T--TGAAA--AC-TGTACAAA---CGTC----------G----T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32389 22 -     50087 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42127 22 +     51645 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410701 22 - 187317192 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395584 22 +  25927173 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44716 22 -     62418 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21403 22 +     24253 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41160 22 +     59329 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  266992 22 +    668171 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18338 22 +     21031 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32070 22 +     33478 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219328 28 -    270270 C--AACAA--AT-TGTACAAA---ATGC--GT--GGCTG----T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318468 22 +  24302211 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353300 22 -    752769 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670093 28 -    737560 g--tgaga--at-tgtataaa---ctgc----atggctg----t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217387 28 +    317179 a--tgaga--at-tgtataaa---ctgc----atggctg----t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7489397 20 +  40650429 c--tgtaa--at-tgtatgaa---cttc----------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 8
s Megaderma_lyra.MegLyr_scaffold_4542                       146379 28 +    207569 T--TGTCT--GT-CATATAAA---CTGCATG---G-CTG----T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14592 28 -     74585 t--tgtga--at-tgtacaga---ttgc----atatctg----t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 20
s Mesoplodon_bidens.MesBid_scaffold_6114                     79928 16 +     93471 c--tgtga--at-tgtaAAGA-----------------------
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 6416 25 +     17804 G--TGAAC--AC-TGTACAAAAGCCATC----------A----T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7189 25 -     12984 G--TGAAC--AC-TGTACAAAAGCCATC----------A----T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15151 25 -     26561 G--TGAAC--AC-TGTACAAAAGCCATC----------A----T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74980979 27 +  93316391 ---TGAGC--AT-TGCACAGA---CTGC--GT--GTCTG----T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180659 28 +    200668 C--CGTGA--AC-TGTACTGA---CGGC----CCGGCTC----T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 1
s Miopithecus_ogouensis.k141_1534655                         18458 22 -     27822 T--TGAAA--AC-TGTACAAA---CATG----------G----T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4677 28 +     27589 t--tgtga--at-tgtacaaa---ctgc----atatctg----t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     48840 27 -     62432 ---TGAGC--AT-TGCACAAA---CTGC--GT--GTCTG----T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351817 16 +    437263 c--tgtga--at-tgtaAAGA-----------------------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174829 28 +    366855 C--TGTGA--AC-TATTCAAA---CTGCATG---G-CTC----T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_13123                  22891 16 -     82753 t--tgtgc--at-tgtaAAGA-----------------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14539 28 -     63510 t--tgtga--at-tgtacaaa---ctgc----gtggctg----t
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          33763 28 +     47283 t--tgtga--gt-tgtacaaa---ctgt----atggttg----t
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343629 28 +  14710649 t--tgtga--tt-tctacaga---ttgc----atatctg----t
i Mustela_putorius.JH418006.1                            C 0 I 20
s Myotis_brandtii.KE162005.1                               9788196 28 +  10118263 c--tgtga--gt-tgtacaaa---ctgt----atggttg----t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378607 28 +   6019432 c--tgtga--gt-tgtacaaa---ctgt----atggttg----t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               378427 28 +   4330536 c--tgtga--gt-tgtacaaa---ctgt----atggttg----t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        2146 28 +      3929 c--tgtga--gt-tgtacaaa---ctgt----atggttg----t
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116175  5 +    130748 a--tgag-------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              24744 22 +     34575 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465062 28 -  31847680 t--tgtga--at-tgtacaaa---ctgc----atatctg----t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1225986 16 -   7148211 c--tgtga--at-tgtaaaga-----------------------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   123036 28 -    149072 G--TGTGA--AC-TGGGCAGA---CTATATG---G-CTC----T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49692 22 -    132029 T--CGAAA--AC-TGTACAAA---CATC----------G----T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5788 22 -     16345 T--CGAAA--AC-TGTACAAA---CATC----------G----T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11671 22 +     22201 T--CGAAA--AC-TGTACAAA---CATC----------G----T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410008 22 -  22158432 T--CGAAA--AC-TGTACAAA---CATC----------G----T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22071 22 -     54323 T--CGAAA--AC-TGTACAAA---CATC----------G----T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194432 28 +   9404916 t--tgtga--at-tatacaaa---ctgc----atatctg----t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93631185 22 + 196305487 C--TCAGC--AC-TGTACAAG---CCAT----------G----T
i Nycticebus_bengalensis.LG01                            C 0 I 2
s Nycticebus_coucang.k141_8166032                              574 22 +      2758 C--TCAGC--AC-TGTACAAG---CCAT----------G----T
i Nycticebus_coucang.k141_8166032                        I 57 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559464 22 - 199412804 C--TCAGC--AC-TGTACAAG---CCAT----------G----T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 2
s Odobenus_rosmarus.KB229312.1                             1447847 28 +   2017862 c--tgtga--at-ttcacaaa---ctgc----atatctg----t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434878 16 -    630418 t--tgtga--ac-tgcaaaga-----------------------
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12870 16 +    150152 t--tgtga--ac-tgtaaaga-----------------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8095256 16 +  10937097 c--tgtga--at-tgtaaaga-----------------------
i Orcinus_orca.KB316932.1                                C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35495 28 +    559221 t--tgtga--at-tatacaaa---ctgc----atatctg----t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_85057                         22710 22 -     23432 C--TTAGC--AC-TGTACAAG---CCGC----------G----T
i Otolemur_crassicaudatus.k141_85057                     C 0 I 2
s Otolemur_garnettii.GL873799.1                             347275 22 +   1103335 C--TTAGC--AC-TGTACAAG---CCGC----------G----T
i Otolemur_garnettii.GL873799.1                          C 0 I 2
s Ovis_aries.CM001607.2                                   26402859 16 -  44047080 c--tatgc--ac-tgtaaaga-----------------------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3378 16 +     17875 c--tatgc--ac-tgtaAAGA-----------------------
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1467900 22 - 189151597 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20593 28 -    230217 t--tgtga--at-tgtacaaa---ctgc----gtggctg----t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18457919 28 -  18783137 t--tgtga--at-tgtacaaa---ctgc----gtggctg----t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968647 28 +   8748460 t--tgtga--at-tgtacaaa---ctgc----gtggctg----t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614302 16 +   2937107 c--tgtgc--ac-tgtaaaga-----------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   239312 22 - 183742232 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5779 22 +     21308 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286816 22 -  20919399 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18432 22 -     27687 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11568 22 +     16796 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18378 22 -     23640 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11511 28 +     78924 t--tgtga--at-tgtacaaa---ctgc--GT--GGATC----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21274 22 +     31479 C--TCAGC--AC-TGTATAAG---CCAC----------G----C
i Perodicticus_ibeanus.k141_1921260                      C 0 I 2
s Perodicticus_potto.k141_1854441                            13645 22 -     24908 C--TCAGC--AC-TGTACAAG---CCAC----------G----C
i Perodicticus_potto.k141_1854441                        C 0 I 2
s Phocoena_phocoena.PhoPho_flattened_line_46867              11114 16 -     15039 c--tgtga--at-tgtaAAGA-----------------------
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2495623                            5198 22 +      7560 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60905 22 -     63152 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43504 22 +     45295 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1183 22 +      5735 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46033 28 +     46691 C--TGTGA--GT-TGTACAAA---CTGTATG---GT-TG----T
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61384 25 +    207309 G--TGAAA--AC-TGTACAAATGGCATT----------G----T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2504 25 -     25401 G--TGAAA--AC-TGTACAAATGGCATT----------A----T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28219 25 +     58159 G--TGAAA--AC-TGTACAAATGGCATT----------A----T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28495 25 +     63561 G--TGAAA--AC-TGTACAAATGGCATT----------A----T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28258 25 +     51148 G--TGAAA--AC-TGTACAAATGGCATT----------A----T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553251 25 -   4542175 G--TGAAA--AC-TGTACAAATGGCATT----------A----T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28242 25 +     51125 G--TGAAA--AC-TGTACAAATGGCATT----------A----T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3198 16 -      8168 c--cgtaa--at-tgtaAAGA-----------------------
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4667 25 +     39866 G--TGAAA--GC-TGTACAAATGGCACT----------G----A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39155 25 -     87950 G--TGAAA--GC-TGTACAAAGGGCACT----------G----A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39548 25 -     88961 G--TGAAA--GC-TGTACAAAGGGCACT----------G----A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4248 25 -     39403 G--TGAAA--GC-TGTACAAAGGGCACT----------G----A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39201 25 +     87928 G--TGAAA--GC-TGTACAAAGGGCACT----------G----A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4245 25 -     60166 G--TGAAA--GC-TGTACAAATGGCACT----------G----A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11181 25 -     67232 G--TGAAA--GC-TGTACAAATGGCACT----------G----A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39097 25 -     90634 G--TGAAA--GC-TGTACAAAGGGCACT----------G----A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40565 25 +     89403 G--TGAAA--GC-TGTACAAATGGCACT----------G----A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173517 22 - 189387572 T--TAAAA--AC-TGTACAAA---CATC----------G----T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188515 22 -   9816681 T--TAAAA--AC-TGTACAAA---CATC----------G----T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23682 22 +     69807 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40877 22 -     80239 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979889 30 +   4620579 T--TGAGCTTTT-TGCACAGA---CTCCATGTCT----T----T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562466 27 -   2598838 ---CGAGC--AT-TGCATAGA---CCGC--GT--GTCTG----T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            112 27 -      7103 ---CGAGC--AT-TGCATAGA---CCGC--GT--GTCTG----T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                              708 27 -     11706 ---CGAGC--AT-TGCGTAGA---CCGCATGTCT----G----T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4443 27 -     30655 ---CGAGC--AT-TGCATAGA---CCGC--GT--GTCTG----T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30768 27 +     46564 ---CGAGC--AT-TGCATAGA---CCGC--GT--GTCTG----T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91059 27 -     98465 ---CGAGC--AT-TGCATAGA---CCGCATGTCT----G----T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4681 27 +     35169 ---TGAGC--AT-TGCATAGA---CCGC--GT--GTCTG----T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            47905 28 -     66298 C--TGTGA--GT-TGTACCGA---CTGCAT--C-G-CTC----T
i Pteronotus_parnellii.KE847780.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4733 28 -     10349 t--tgtga--gt-tctacaga---ttgc----atatctg----t
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 I 20
s Pteropus_alecto.KB030862.1                               5836801 28 -  28871421 C--TGCAA--AT-TGTACAAA---ATGCATG---G-CTG----T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533376 28 -   4952924 C--TGCAA--AT-TGTACAAA---ATGCATG---G-CTG----T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095471 28 +  38429054 t--tgtga--at-tgtacaaa---ccgc----gtggctg----t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23069 22 +     91421 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  149561 22 -   7812017 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              3938 22 +     72585 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51799 16 +     55069 t--tgtga--ac-tacaAAGA-----------------------
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909441 28 +   3329780 t--tgtga--at-tgtacAAA---CATCATG---G-CTA----T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            24902 22 +     27361 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118261 22 + 195417433 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232510 22 -   7961872 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70846 28 -    116970 C--TGCAA--AT-TGCACAAA---ATGCATG---G-CTG----T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                380 25 +     27962 G--TGAAA--AC-TGTGCAAACGGCATT----------A----C
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              380 25 +      6077 G--TGAAA--AC-TGTGCAAACGGCATT----------A----C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              401 25 +      5971 G--TGAAA--AC-TGTGCAAACGGCATT----------C----C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                453 25 +      5932 G--TGAAA--AC-TGTGCGAACGGCATT----------C----C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               604 25 -      2099 G--TGAAA--AC-TGTGCAAACGGCACT----------C----C
i Saguinus_labiatus.k141_1571581                         C 0 I 4
s Saguinus_midas.LG03                                       387639 25 - 209938924 G--TGAAA--AC-TGTGCAAACGGCATT----------A----C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 404 25 +      5979 G--TGAAA--AC-TGTGCAGACGGCACT----------C----C
i Saguinus_mystax.k141_8077960                           C 0 I 4
s Saguinus_oedipus.k141_1466288                                779 25 -      4301 G--TGAAA--AC-TGTGCAAACGGCATT----------A----C
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6452 16 +     16473 T--TGTGC--AC-TGTAAAGA-----------------------
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Sapajus_apella.ctg103                                     234854 23 +   5703754 ---TGAAA--AC-TGTACAAATGACGT-----------A----T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4444 23 +     21866 ---TGAAA--AC-TGTACAAATGACGT-----------A----T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112569 28 +    313613 CTGT--GA--AT-GGTGAAGA---CTGCATG---G-CTG----T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21392 22 +     27374 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24909 22 +     58920 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11404 22 -     45317 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19061 22 -     42441 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21743 22 -     29113 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24815 22 -     48123 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854541 26 -   1910179 t--t--ga--ct-tgtataaa---ctga----atggctg----t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1856637 20 +   3870691 c--tgtaa--at-tgtatgaa---cttc----------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 8
s Spilogale_gracilis.SpiGra_flattened_line_13525              3163 28 -     97271 t--tgtga--at-tgtataga---ctgc----atgtcta----t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121133 28 +    196729 t--tgtga--at-tgtacaaa---ctgc----gtggctg----t
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6639868 16 +  69701581 t--tgtgt--aa-tgtaaaga-----------------------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       386989 22 +   1523678 T--CGAAA--AC-TGTACAAA---CATC----------G----T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1044  5 -      2009 a--tgtg-------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187637 22 +    199430 t--tgtga--at-tgtacaca---ctg----------tc----t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101592 22 -    539355 t--tgtga--at-tgtacaca---ctg----------tc----t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                3783 20 +      6850 t--cgtga--at-tgtaca-----catt----------g----c
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3822 20 +     20590 t--cgtga--at-tgtaca-----catt----------g----t
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349297 22 - 186847797 T--TGAAA--AC-TGTACAAA---CATC----------G----T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16421  5 -     31044 a--tgtg-------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475714 28 -    610378 C--TGTGA--AC-TGTACCGA---CTGCA---C-GGCTC----T
i Tonatia_saurophila.TonSau_scaffold_294                 I 8 I 1
s Trachypithecus_auratus.k141_1189070                        16956 22 +     26378 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29637 22 -     78344 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16277 22 +     25722 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24500 22 -     62838 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24617 22 +     46913 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5427 22 -     28527 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26439 22 -     64340 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24476 22 -     63452 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5918 22 +     22490 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3538 22 +      4141 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6344 22 -     13050 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251579 22 -   6242583 T--TGAAA--AC-TGTACAAA---TATT----------G----T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57311 22 +     59866 T--TGAAA--AC-TGTACAAA---CATT----------G----T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172065 16 -    200418 t--tgtga--ac-tgtaAAGA-----------------------
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1826205 27 -   4065304 A---ATAA--CT-CGTGCCGA---CTGCATGACT----G----A
i Tupaia_chinensis.KB320699.1                            I 50 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3555 27 -     70247 A---ATAA--CT-CGTGCTGA---CTCCATGAC---C-G----A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17359995 16 -  33153633 c--tgtga--at-tgtaaaga-----------------------
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103796 28 -    105689 CTGT--GA--AC-TGTGTAAA---TTGCATG---G-CTC----T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177784 28 +   5085361 t--tgtga--at-tatacaaa---cagc----atatctg----t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  21519 32 -     30710 T--TGAGC--AT-TGCACAGA---CTGCATGTCTGTCTG----T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20427 32 -    147434 T--TGAGC--AT-TGCACAGA---CTGCATGTCTGTCTG----T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75075 15 +   5488506 t--tgtga--at-tacaaa-a-----------------------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101179 28 -    112863 t--tgtga--at-tatacaaa---ctgc----atatctg----t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162578 20 -    224448 T--TGTGA--AT-TGTACAAA---CTTC----------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 225
s Zalophus_californianus.ZalCal_flattened_line_17732         25067 28 -     86975 t--tgtga--at-ttcacaaa---ctgc----ctatctg----t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39076483 861 +  43346337 I
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        682 43 +     36723 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----TCTTCCATTC------------------------T-T-TCCTC
s Acinonyx_jubatus.LLWD01001279.1                           809245 43 +   1699592 aTGC-A-----------------------G-A-----ACTCTTG--A--TTTACTC-----T----CTG--T--GT----TAC-C----TT-------A------------------------T-T-TTCTC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411136 43 +  29979442 aTGC-A-----------------------GAA------CTCTTG--A--TTTACTC-----T----TTG--T------Gttac-a----tt-------c------------------------t-t-ttctc
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                            212053 13 +    347723 atgc-a-----------------------gaa------ctctt-----------------------------------------------------------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 22
s Allenopithecus_nigroviridis.k141_3755588                   43991 43 +     53615 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Allenopithecus_nigroviridis.k141_3755588               C 0 I 3
s Allochrocebus_lhoesti.k141_441277                          39806 43 +     44087 ATGC-A-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Allochrocebus_lhoesti.k141_441277                      C 0 I 3
s Alouatta_belzebul.k141_1011583                             68728 33 -     84148 ATGC-A-----------------------G-C-----AGCCTT---CA-TCT--AC-----C----C-------------TGT-G----TGctccg------------------------------------
i Alouatta_belzebul.k141_1011583                         C 0 I 2
s Alouatta_caraya.k141_1109140                               40951 33 -     78289 ATGC-A-----------------------G-C-----AGCCTT---CA-TCT--AC-----C----C-------------TGT-A----TGctccg------------------------------------
i Alouatta_caraya.k141_1109140                           C 0 I 2
s Alouatta_discolor.k141_2561099                             40399 33 +     55831 ATGC-A-----------------------G-C-----AGCCTT---CA-TCT--AC-----C----C-------------TGT-G----TGctccg------------------------------------
i Alouatta_discolor.k141_2561099                         C 0 I 2
s Alouatta_juara.k141_1687208                                38840 33 -     64179 ATGC-A-----------------------G-C-----AGCCTT---CA-TCT--AC-----C----C-------------TGT-G----TGctccg------------------------------------
i Alouatta_juara.k141_1687208                            C 0 I 2
s Alouatta_macconnelli.k141_361275                           20483 33 -     24835 ATGC-A-----------------------G-C-----AGCCTT---CA-TCT--AC-----C----C-------------TGT-G----TGctccg------------------------------------
i Alouatta_macconnelli.k141_361275                       C 0 I 2
s Alouatta_nigerrima.k141_376068                             37466 33 +     45454 ATGC-A-----------------------G-C-----AGCCTT---CA-TCT--AC-----C----C-------------TGT-G----TGctccg------------------------------------
i Alouatta_nigerrima.k141_376068                         C 0 I 2
s Alouatta_palliata.k141_638677                              43165 33 +     70886 ATGC-A-----------------------G-C-----AGCCTT---CA-TCT--AC-----C----C-------------TGT-G----TGctccg------------------------------------
i Alouatta_palliata.k141_638677                          C 0 I 2
s Alouatta_puruensis.k141_251022                              5292 33 +     30854 ATGC-A-----------------------G-C-----AGCCTT---CA-TCT--AC-----C----C-------------TGT-G----TGctccg------------------------------------
i Alouatta_puruensis.k141_251022                         C 0 I 2
s Alouatta_seniculus.k141_928287                             29431 33 +     42133 ATGC-A-----------------------G-C-----AGCCTT---CA-TCT--AC-----C----C-------------TGT-G----TGctccg------------------------------------
i Alouatta_seniculus.k141_928287                         C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      172712 33 -    412891 -------------------------------T-----GGTCTT---C-ACTG--ACTCCG-T----GTGC----------CGC-G----TT-------C------------------------T-T-C----
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Aotus_azarae.k141_118258                                   47240 33 -     65372 ATGc-a-----------------------g-c-----agcctt---ta-tct--ac-----c----t-------------tac-a----tgctccg------------------------------------
i Aotus_azarae.k141_118258                               C 0 I 2
s Aotus_griseimembra.k141_982342                             40986 33 +     43593 ATGC-A-----------------------G-C-----AGCCTT---CA-TCt--at-----c----t-------------tac-a----tgctccg------------------------------------
i Aotus_griseimembra.k141_982342                         C 0 I 2
s Aotus_nancymaae.KZ198451.1                                668998 33 +   5030052 ATGC-A-----------------------G-C-----AGCCTT---CA-TCT--AC-----C----T-------------TAC-A----TGCTCCG------------------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 I 2
s Aotus_trivirgatus.k141_192090                              20640 33 -     23494 ATGC-A-----------------------G-C-----AGCCTT---Ca-cct--ac-----c----t-------------tac-a----tgctccg------------------------------------
i Aotus_trivirgatus.k141_192090                          C 0 I 2
s Aotus_vociferans.k141_944972                                5776 33 +      8415 ATGc-a-----------------------g-c-----agcctt---ca-tct--ac-----c----t-------------tac-a----tgctccg------------------------------------
i Aotus_vociferans.k141_944972                           C 0 I 2
s Aplodontia_rufa.AprRuf_scaffold_46868                      11947 37 -     32367 ATGTAA-----------------------G-A-----ATTGTT---GA-TCT--AG-----T----T-------------CAT-G----TT-------C------------------------T-T-TCCAC
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 5 I 3
s Arctocebus_calabarensis.k141_1364444                       15877 23 -     45910 -----------------------------------------------C-TGC--AC-----T----C-------------TGC-A----TGTCACCTTC------------------------A--------
i Arctocebus_calabarensis.k141_1364444                   I 2 I 6
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   553 33 -     15198 -------------------------------T-----GGTCTT---C-ACTG--ACTTTA-T----GTGC----------CAC-G----TC-------C------------------------T-T-C----
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 1 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271226 33 +  21539123 ATGC-A-----------------------G-C-----AGGCTT---CA-TCC--AC-----C----C-------------TAT-G----TGctcca------------------------------------
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 2
s Ateles_belzebuth.k141_1572163                               7397 33 +     48076 GTGC-A-----------------------G-C-----AGGCTT---CA-TCC--AC-----C----C-------------TAT-G----TGctcca------------------------------------
i Ateles_belzebuth.k141_1572163                          C 0 I 2
s Ateles_chamek.k141_615173                                   2531 33 -     28759 GTGC-A-----------------------G-C-----AGGCTT---CA-TCC--AC-----C----C-------------TGT-G----TGctcca------------------------------------
i Ateles_chamek.k141_615173                              C 0 I 2
s Ateles_geoffroyi_a.k141_1283730                              30083 33 +     44353 ATGC-A-----------------------G-C-----AGGCTT---CA-TCC--AC-----C----C-------------TAT-G----TGctcca------------------------------------
i Ateles_geoffroyi_a.k141_1283730                          C 0 I 2
s Ateles_marginatus.k141_970259                              45458 33 -     71267 GTGC-A-----------------------G-C-----AGGCTT---CA-TCC--AC-----C----C-------------TAT-G----TGctcca------------------------------------
i Ateles_marginatus.k141_970259                          C 0 I 2
s Ateles_paniscus.k141_866194                                19514 33 -     33135 GTGC-A-----------------------G-C-----AGGCTT---CA-TCC--AC-----C----C-------------TAT-G----TGctcca------------------------------------
i Ateles_paniscus.k141_866194                            C 0 I 2
s Avahi_laniger.k141_2756659                                  2644 23 +     11645 -------------------------------------------------------------T----C-------------TGT-G----TGCAATAttc------------------------t-t-tcctc
i Avahi_laniger.k141_2756659                             I 15 I 2
s Avahi_peyrierasi.k141_1823318                               2646 23 -     19611 -------------------------------------------------------------T----C-------------TGT-G----TGCAATAttc------------------------t-t-tcctc
i Avahi_peyrierasi.k141_1823318                          I 15 I 2
s Cacajao_ayresi.k141_96119                                   4418 33 +     28062 ACGc-a-----------------------g-c-----aggctt---ca-tct--ac-----c----c-------------tac-g----tgctcca------------------------------------
i Cacajao_ayresi.k141_96119                              C 0 I 2
s Cacajao_calvus.k141_89051                                  39712 33 -     91139 ATGc-a-----------------------g-c-----aggctt---ca-tct--ac-----c----c-------------tac-g----tgctcca------------------------------------
i Cacajao_calvus.k141_89051                              C 0 I 2
s Cacajao_hosomi.k141_81245                                  17238 33 +     95584 ATGc-a-----------------------g-c-----aggctt---ca-tct--ac-----c----c-------------tac-g----tgctcca------------------------------------
i Cacajao_hosomi.k141_81245                              C 0 I 2
s Cacajao_melanocephalus.k141_619699                         17151 33 +    119600 ATGc-a-----------------------g-c-----aggctt---ca-tct--ac-----c----c-------------tac-g----tgctcca------------------------------------
i Cacajao_melanocephalus.k141_619699                     C 0 I 2
s Callibella_humilis.k141_1233062                             6657 32 +     18648 ATGC-G-----------------------G-C-----AGC-GT---CA-TCT--AC-----C----C-------------TGT-G----TGctcca------------------------------------
i Callibella_humilis.k141_1233062                        C 0 I 2
s Callimico_goeldii.k141_1609886                              6333 32 -     13885 ATGC-A-----------------------G-C-----GGC-GT---CA-TCT--AC-----C----C-------------TGC-G----CGctccg------------------------------------
i Callimico_goeldii.k141_1609886                         C 0 I 2
s Callithrix_geoffroyi.k119_473390                           15019 32 +     17162 ATGC-G-----------------------G-c-----agc-gt---ca-tct--ac-----c----c-------------tgc-g----tgctcca------------------------------------
i Callithrix_geoffroyi.k119_473390                       C 0 I 2
s Callithrix_jacchus.pat_scaffold_3                      165449975 32 + 189096842 ATGC-G-----------------------G-C-----AGC-GT---CA-TCT--AC-----C----C-------------TGC-G----TGCTCCA------------------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 2
s Callithrix_kuhlii.k119_404482                              16268 32 -     18408 ATGC-G-----------------------G-c-----agc-gt---ca-tct--ac-----c----c-------------tgc-g----tgctcca------------------------------------
i Callithrix_kuhlii.k119_404482                          C 0 I 2
s CanFam4.chr16                                           42501574 42 +  60362399 GTGC-A-----------------------G-A------CTCTT--AA--TTTACTC-----T----CTG--T-A-T----TAC-A----TT-------C------------------------T-T-TCTTC
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5204 42 -     23171 GTGC-A-----------------------G-A------CTCTT--AA--TTTACTC-----T----CTG--T-A-T----TAC-A----TT-------C------------------------T-T-TCTTC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                          218565 42 +   9314153 gtgc-a-----------------------g-A------CTCTT--AA--TTTACTC-----T----CTG--T-A-----ttac-a----tt-------c------------------------t-t-tcttc
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            41611690 42 +  59632846 GTGC-A-----------------------G-A------CTCTT--AA--TTTACTC-----T----CTG--T-A-----ttac-a----tt-------c------------------------t-t-tcttc
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            45103260 42 -  63665305 gtgc-a-----------------------g-A------CTCTT--AA--TTTACTC-----T----CTG--T-A-----ttac-a----tt-------c------------------------t-t-tcttc
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Carlito_syrichta.NW_007259797.1                           267056 43 +    496798 ATGC-A-----------------------A-C-----TGTCTT---AA-CCT--AC-----T----C-------------TAT-G----TGTGACACTC------------------------T-T-TCCTC
i Carlito_syrichta.NW_007259797.1                        C 0 I 3
s Carollia_perspicillata.CarPer_scaffold_170178                599 33 +      5315 -------------------------------C-----GGTCTT---C-ATTG--GCTC-GCT----GTGC----------CAC-G----CC-------C------------------------T-T-C----
i Carollia_perspicillata.CarPer_scaffold_170178          I 1 C 0
s Cebuella_niveiventris.k141_592277                           1553 32 -     12580 ATGC-G-----------------------G-C-----AGC-Gt---ca-tct--ac-----c----c-------------tgt-g----tgctcca------------------------------------
i Cebuella_niveiventris.k141_592277                      C 0 I 2
s Cebuella_pygmaea.k141_145798                               39439 32 +     53515 ATGC-G-----------------------G-C-----AGC-GT---CA-TCT--AC-----C----C-------------TGT-G----TGctcca------------------------------------
i Cebuella_pygmaea.k141_145798                           C 0 I 2
s Cebus_albifrons.Contig27                                  367654 11 -  26074798 ATGC-A-----------------------G-C-----AGcc-------------------------------------------------------------------------------------------
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4543 11 -     34880 ATGC-A-----------------------G-C-----AGcc-------------------------------------------------------------------------------------------
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63638 11 -     89041 ATGC-A-----------------------G-C-----AGcc-------------------------------------------------------------------------------------------
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            221 43 -      1636 atgc-a-----------------------a-c-----tgtCTT---AA-TCT--AC-----T----C-------------TAT-G----TGCGACACTc------------------------t-t-tccac
i Cephalopachus_bancanus.k141_72622                      C 0 I 3
s Ceratotherium_simum.JH767749.1                          15488642 40 -  27778364 ATGT-A-----------------------G-C--------CTT--AA--TTTACTC-----T----GTG--T-GC-----Tac-a----tt-------c------------------------t-t-tcctc
i Ceratotherium_simum.JH767749.1                         C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15475 40 +     27315 ATGT-A-----------------------G-C--------CTT--AA--TTTACTC-----T----GTG--T-GC-----TAC-A----tt-------c------------------------t-t-tcctc
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 3
s Cercocebus_atys.KQ010504.1                                137151 43 -   4669795 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----Tcctccattc------------------------t-t-tcctc
i Cercocebus_atys.KQ010504.1                             C 0 I 3
s Cercocebus_chrysogaster.k141_1522556                       40892 43 +     47900 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Cercocebus_chrysogaster.k141_1522556                   C 0 I 3
s Cercocebus_lunulatus.k141_2779015                          40724 43 -     44860 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Cercocebus_lunulatus.k141_2779015                      C 0 I 3
s Cercocebus_torquatus.k141_2159127                          40706 43 -    148725 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Cercocebus_torquatus.k141_2159127                      C 0 I 3
s Cercopithecus_ascanius.k141_3120866                        23765 43 -     40656 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Cercopithecus_ascanius.k141_3120866                    C 0 I 3
s Cercopithecus_cephus.k141_4183004                           3700 43 +     20796 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Cercopithecus_cephus.k141_4183004                      C 0 I 3
s Cercopithecus_diana.k141_132293                             7955 43 -     17524 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCctctattc------------------------t-t-tcctc
i Cercopithecus_diana.k141_132293                        C 0 I 3
s Cercopithecus_hamlyni.k141_566925                          23644 43 -     34525 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCctctattc------------------------t-t-tcctc
i Cercopithecus_hamlyni.k141_566925                      C 0 I 3
s Cercopithecus_lowei.k141_2101310                            8355 43 -     25376 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCctctattc------------------------t-t-tcctc
i Cercopithecus_lowei.k141_2101310                       C 0 I 3
s Cercopithecus_albogularis.ctg5                                  360920 43 -  39242232 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCctctattc------------------------t-t-tcctc
i Cercopithecus_albogularis.ctg5                               C 0 I 3
s Cercopithecus_mona.ctg39                                  266666 43 +  21565898 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Cercopithecus_mona.ctg39                               C 0 I 3
s Cercopithecus_neglectus.k141_858615                        28118 43 -     45857 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCATGc------------------------t-t-tcctc
i Cercopithecus_neglectus.k141_858615                    C 0 I 3
s Cercopithecus_nictitans.k141_2995370                       23909 43 -     32606 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCctctattc------------------------t-t-tcctc
i Cercopithecus_nictitans.k141_2995370                   C 0 I 3
s Cercopithecus_petaurista.k141_42573                           98 43 +      8499 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCctctattc------------------------t-t-tcctc
i Cercopithecus_petaurista.k141_42573                    C 0 I 3
s Cercopithecus_pogonias.k141_6079                           21608 43 +     70610 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Cercopithecus_pogonias.k141_6079                       C 0 I 3
s Cercopithecus_roloway.k141_3012935                         18473 43 +     36323 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCctctattc------------------------t-t-tcctc
i Cercopithecus_roloway.k141_3012935                     C 0 I 3
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9440 36 -     19938 ---c-a-----------------------g-C-----AGTCCT---GA-CCT--AC-----T----CTG--T-GC-----TGC-A----AT-------C------------------------T-T-TCT--
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             27043 42 -     33796 AT-C-C-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATAttc------------------------t-t-tcctc
i Cheirogaleus_major.k141_666340                         C 0 I 2
s Cheirogaleus_medius.k141_759766                             1238 42 -     15404 at-c-a-----------------------g-c-----agtctt---ga-tct--ac-----t----c-------------tgt-g----tgctgtattc------------------------t-t-tcctc
i Cheirogaleus_medius.k141_759766                        C 0 I 2
s Cheracebus_lucifer.k141_2312002                             5517 32 -     32913 ATGC-A-----------------------G-C-----AGCCT----CA-TCT--AC-----C----C-------------CAC-A----TGctcca------------------------------------
i Cheracebus_lucifer.k141_2312002                        C 0 I 2
s Cheracebus_lugens.k141_1179667                             15930 32 -     40346 ATGC-A-----------------------G-C-----AGCCT----CA-TCT--AC-----C----C-------------CAC-A----TGctcca------------------------------------
i Cheracebus_lugens.k141_1179667                         C 0 I 2
s Cheracebus_regulus.k141_471822                             16194 32 +    216457 ATGC-A-----------------------G-C-----AGCCT----CA-TCT--AC-----C----C-------------CAC-A----TGctcca------------------------------------
i Cheracebus_regulus.k141_471822                         C 0 I 2
s Cheracebus_torquatus.k141_890198                           15973 32 +     39636 ATGC-A-----------------------G-C-----AGCCT----CA-TCT--AC-----C----C-------------CAC-A----TGctcca------------------------------------
i Cheracebus_torquatus.k141_890198                       C 0 I 2
s Chiropotes_albinasus.k141_1946120                            407 25 +      5346 ATGC-A-----------------------G-C-----AGCCTT---CG-TCT--AC-----C----C-------------GGC-------------------------------------------------
i Chiropotes_albinasus.k141_1946120                      C 0 I 9
s Chiropotes_israelita.k141_313004                           39059 33 -    112038 ATGc-a-----------------------g-c-----aggctt---ca-tct--ac-----c----c-------------tac-g----tgctcca------------------------------------
i Chiropotes_israelita.k141_313004                       C 0 I 2
s Chiropotes_sagulatus.k141_1113111                           4631 33 +     34062 ATGC-A-----------------------G-C-----AGGCTT---CA-TCT--GC-----C----c-------------tac-g----tgctcca------------------------------------
i Chiropotes_sagulatus.k141_1113111                      C 0 I 2
s Chlorocebus_aethiops.ctg25                                339369 43 +  18827391 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Chlorocebus_aethiops.ctg25                             C 0 I 3
s Chlorocebus_pygerythrus.k141_3063162                        5980 43 -     44032 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Chlorocebus_pygerythrus.k141_3063162                   C 0 I 3
s Chlorocebus_sabaeus.CM001947.1                            300695 43 - 135778131 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----Tcctccattc------------------------t-t-tcctc
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 3
s Colobus_angolensis.KN981557.1                             405228 43 -   2368649 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCtccattc------------------------t-t-tcctc
i Colobus_angolensis.KN981557.1                          C 0 I 3
s Colobus_guereza.LG01                                      374387 43 - 200372422 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Colobus_guereza.LG01                                   C 0 I 3
s Colobus_polykomos.k141_1559707                              5112 43 -      6605 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----CCCTCCAttc------------------------t-t-tcctc
i Colobus_polykomos.k141_1559707                         C 0 I 3
s Condylura_cristata.JH655891.1                           35803544 38 +  53390261 GTGC-A-----------------------G-T-----CATATT----C-TTT--AC-----C----AT----------gctgc-a----tt-------c------------------------t-t-tcctc
i Condylura_cristata.JH655891.1                          C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8945 43 +     10921 ATGC-A-----------------------G-C-----TGTCTT---A-actt--at-----tccatg----------tgctg-ca----tt-------c------------------------t-t-tcttc
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129               482 43 +     87169 aTGC-A-----------------------G-A-----ACTCTTG--A--TTTACCC-----T----CTG--T-GC-----TAT-G----TT-------A------------------------T-T-TTCTC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Dasypus_novemcinctus.JH564415.1                          2105646 36 -   2246927 ---c-a-----------------------g-C-----AGTTCT---GC-TCT--AC-----T----CTG--T-GC-----TAC-A----CT-------C------------------------T-T-TCT--
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289072 42 +  12879189 GTGC-A-----------------------G-T-----GGTCTT---GA-TCT--GC-----T----C-------------TGT-G----TGctgtcttc------------------------c-t-t-ctc
i Daubentonia_madagascariensis.ctg71                     C 0 I 2
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660929 40 -   1390856 atgt-a-----------------------g-c--------CTT--AA--TTTACTC-----T----ATG--T-GC-----Tac-a----tt-------c------------------------t-t-tcctc
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                  135721 40 -    198055 ATGT-A-----------------------G-C--------CTT--AA--TTTACTC-----T----GTG--T-GC-----TAC-A----tt-------c------------------------t-t-tcctc
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 3
s Eidolon_helvum.AWHC01266696.1                               2284 30 +     19438 ----------------------------------------------a-attt--ac-----tttttg----------tgctat-a----tt-------c------------------------t-t-tcctc
i Eidolon_helvum.AWHC01266696.1                          C 0 I 3
s Enhydra_lutris.KZ291758.1                               24906622 23 +  41312741 -------------------------------------------------------------T----CT-C-T--GT--gttac-a----tt-------c------------------------t-t-ttctc
i Enhydra_lutris.KZ291758.1                              I 20 I 1
s Eptesicus_fuscus.JH977646.1                             12573868 39 +  14770903 -----------------------------G-TGCAGATGTCTT---A-ATAT--AC-----TCTGTGCGC----------TAC-A----tt-------c------------------------t-t-t----
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3037899 41 -   4378816 atgc-a-----------------------g-c-----tgcctt--gA--TTT--TC-----T----ATG-A--GC-----tac-a----tt-------c------------------------t-t-tcctc
i Equus_asinus.JREZ01000139.1                            C 0 I 3
s Equus_caballus.CM000403.2                               21371833 41 +  39960074 atgc-a-----------------------g-c-----tgcctt--gA--TTT--TC-----T----ATG-A--GC-----tac-a----tt-------c------------------------t-t-tcctc
i Equus_caballus.CM000403.2                              C 0 I 3
s Equus_przewalskii.KK951119.1                              408619 41 -    498745 ATGA-A-----------------------G-C-----TGCCTTG--A--TTT--TC-----T----ATG-A--GC-----tac-a----tt-------c------------------------t-t-tcctc
i Equus_przewalskii.KK951119.1                           C 0 I 3
s Erythrocebus_patas.Contig38                               258927 43 +  21539334 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Erythrocebus_patas.Contig38                            C 0 I 3
s Eulemur_albifrons.k141_51491                               12038 43 -     24895 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATAGTc------------------------t-t-tcctc
i Eulemur_albifrons.k141_51491                           C 0 I 2
s Eulemur_collaris.k141_601111                               39750 43 -     70999 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATAGTc------------------------t-t-tcctc
i Eulemur_collaris.k141_601111                           C 0 I 2
s Eulemur_coronatus.k141_384460                              83710 43 +    112731 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATAGTc------------------------t-t-tcctc
i Eulemur_coronatus.k141_384460                          C 0 I 2
s Eulemur_flavifrons.k141_433119                             40282 43 +     68309 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATAGTc------------------------t-t-tcctc
i Eulemur_flavifrons.k141_433119                         C 0 I 2
s Eulemur_fulvus.k141_636316                                 50607 43 -     65740 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATAGTc------------------------t-t-tcctc
i Eulemur_fulvus.k141_636316                             C 0 I 2
s Eulemur_macaco.k141_1562045                                21237 43 -     75513 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATAGTc------------------------t-t-tcctc
i Eulemur_macaco.k141_1562045                            C 0 I 2
s Eulemur_mongoz.k141_232305                                 45430 43 -     97555 ATGC-A-----------------------G-C-----AGTCTT---GA-TTT--CC-----T----C-------------TGT-G----TGCTATAGTc------------------------t-t-tcctc
i Eulemur_mongoz.k141_232305                             C 0 I 2
s Eulemur_rubriventer.k141_1423786                            2157 43 +     30972 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATAGTc------------------------t-t-tcctc
i Eulemur_rubriventer.k141_1423786                       C 0 I 2
s Eulemur_rufus.k141_514691                                  39880 43 -     52037 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATAGTc------------------------t-t-tcctc
i Eulemur_rufus.k141_514691                              C 0 I 2
s Eulemur_sanfordi.k141_1122526                              56281 43 -    111500 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATAGTc------------------------t-t-tcttc
i Eulemur_sanfordi.k141_1122526                          C 0 I 2
s Felis_catus.CM001381.2                                 186242903 43 - 206538554 atgc-a-----------------------g-a-----actctt--gA--TTTACTC-----T----CTG--T-GC-----TAC-C----TT-------A------------------------T-T-TTCTC
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                          185112685 43 - 205367284 atgc-a-----------------------g-a-----actctt--gA--TTTACTC-----T----CTG--T-GC-----TAC-C----TT-------A------------------------T-T-TTCCC
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_31944                 24033 43 -     30238 aTGC-A-----------------------G-A-----ACTCTTG--A--TTTACTC-----T----CTG--T-GC-----TAC-C----TT-------A------------------------T-T-TTCTC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 1
s Galago_moholi.ctg3793                                     119458 23 -    137831 -----------------------------------------------C-TGA--AC-----T----C-------------TGA-A----TGTCACCTTC------------------------T--------
i Galago_moholi.ctg3793                                  I 2 I 6
s Galago_senegalensis.k141_991736                             2998 23 +     22493 -----------------------------------------------C-TGA--AC-----T----C-------------TGC-A----TGTCACCTTC------------------------T--------
i Galago_senegalensis.k141_991736                        I 2 I 6
s Galagoides_demidoff.k141_561628                            15191 18 -     32986 -----------------------------------------------C-TGC--AC-----T----C-------------TGC-A----GGTCAC-------------------------------------
i Galagoides_demidoff.k141_561628                        I 2 I 1542
s Galeopterus_variegatus.GalVar_scaffold_132127               3349 43 +      5976 atgc-a-----------------------g-c-----agtctt---gG-TCT--CC-----T----C-------------TGT-G----TGCTACACcc------------------------t-c-tcttc
i Galeopterus_variegatus.GalVar_scaffold_132127          I 48 I 3
s Gorilla_beringei.k141_3358147                               1033 43 -      8343 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----TCTTCCAttc------------------------t-t-tcctc
i Gorilla_beringei.k141_3358147                          I 22 I 3
s Gorilla_gorilla.LT578336.1                                 66584 43 +  33314783 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----TCTtccattc------------------------t-t-tcctc
i Gorilla_gorilla.LT578336.1                             I 469 I 16
s Hapalemur_alaotrensis.k141_330369                          11969 43 -     40692 ATGc-a-----------------------g-c-----agtctt---ga-tct--ac-----t----c-------------tct-g----tgctatattc------------------------t-t-tcatc
i Hapalemur_alaotrensis.k141_330369                      C 0 I 2
s Hapalemur_gilberti.k141_646465                             33371 43 +     49394 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATAttc------------------------t-t-tcctc
i Hapalemur_gilberti.k141_646465                         C 0 I 2
s Hapalemur_griseus.k141_763500                              58239 43 -     66874 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATAttc------------------------t-t-tcctc
i Hapalemur_griseus.k141_763500                          C 0 I 2
s Hapalemur_meridionalis.k141_258450                          7116 43 -     42923 ATGc-a-----------------------g-c-----agtctt---ga-tct--ac-----t----c-------------tgt-g----tgctatattc------------------------c-t-tcctc
i Hapalemur_meridionalis.k141_258450                     C 0 I 2
s Hapalemur_occidentalis.k141_578367                         14112 43 -     53142 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATAttc------------------------t-t-tcctc
i Hapalemur_occidentalis.k141_578367                     C 0 I 2
s Helogale_parvula.HelPar_flattened_line_2585                26798 43 -    327341 atgc-a-----------------------g-a-----actctt--gA--TTTACCC-----T----CTG--T-GC-----TGC-C----TT-------A------------------------T-T-TTCTC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hipposideros_armiger.JXIK01000431.1                      1546173 47 -   1711038 ATGC-A-----------------------T-C-----TGCCTT---A-GTTT--AC-----TCTATGTGC----------Ta-tatccttt-------c------------------------t-t-tcttc
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_23202               45482 47 +     49977 ATGC-A-----------------------T-C-----TGCTTT---A-ATTT--AC-----TCTATGTGC----------TA-TATCCTTT-------C------------------------T-T-TCTTC
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 7
s Hoolock_leuconedys.ctg274                                    138429 43 -    630532 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----TCCCCCATTC------------------------G-t-tcctc
i Hoolock_leuconedys.ctg274                                 C 0 I 3
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65477 43 +     83186 aTGC-A-----------------------G-A-----ACTCTTG--A--TTTACCC-----T----CTG--T-GC-----TAC-C----TT-------A------------------------T-T-TTCTC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 1
s Hylobates_agilis.k141_1155965                               1462 43 +     12352 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----C----C-------------TAT-G----TCCCCCAttc------------------------t-t-tcctc
i Hylobates_agilis.k141_1155965                          C 0 I 3
s Hylobates_klossii.k141_738755                               8645 43 +     55766 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----TCCCCCAttc------------------------t-t-tcctc
i Hylobates_klossii.k141_738755                          C 0 I 3
s Hylobates_pileatus_b.LG02                                       2047984 43 + 191637585 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----TCCCCCAttc------------------------t-t-tcctc
i Hylobates_pileatus_b.LG02                                     C 0 I 3
s Hylobates_pileatus_a.tarseq_633                            7797316 43 +  11177569 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----TCCCCCAttc------------------------t-t-tcctc
i Hylobates_pileatus_a.tarseq_633                          C 0 I 3
s Ictidomys_tridecemlineatus.JH393364.1                     375332 37 +   7955117 atgt-a-----------------------g-c-----aA--TTGTTGA-TCT--AG-----T----c-------------tat-g----tt-------c------------------------t-t-tcttc
i Ictidomys_tridecemlineatus.JH393364.1                  I 8 I 3
s Indri_indri.k141_4600452                                     116 43 -      1527 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCGATATtc------------------------t-t-tcctc
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39773 33 +    110728 ATGC-A-----------------------G-C-----AGCCTT---CA-TCC--AC-----C----C-------------TGT-G----GGctcca------------------------------------
i Lagothrix_lagothricha.k141_246028                      C 0 I 2
s Lemur_catta.scaffold_24                                 14756761 43 +  30322482 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AT-----T----C-------------TGT-G----TGCTATAttc------------------------t-t-tcctc
i Lemur_catta.scaffold_24                                C 0 I 2
s Leontocebus_fuscicollis.k141_2994775                         478 25 -     13097 ATGC-A-----------------------G-C-----AGCCTT---CG-TCT--AC-----C----C-------------GGC-------------------------------------------------
i Leontocebus_fuscicollis.k141_2994775                   C 0 I 9
s Leontocebus_illigeri.k141_2951200                            429 25 +      5940 ATGC-A-----------------------G-C-----AGCCTT---CG-TCT--AC-----C----C-------------GGC-------------------------------------------------
i Leontocebus_illigeri.k141_2951200                      C 0 I 9
s Leontocebus_nigricollis.k141_3905062                          60 25 -      5717 ATGC-A-----------------------G-C-----AGCCTT---CG-TCT--AC-----C----C-------------GGC-------------------------------------------------
i Leontocebus_nigricollis.k141_3905062                   C 0 I 9
s Leontopithecus_chrysomelas.k141_1327670                     6681 32 -     11567 ATGC-A-----------------------G-C-----AAC-GT---CA-TCT--AC-----C----C-------------TGC-A----TGctcca------------------------------------
i Leontopithecus_chrysomelas.k141_1327670                C 0 I 2
s Leontopithecus_rosalia.k141_349454                          8062 32 -     12945 ATGC-A-----------------------G-C-----AAC-GT---CA-TCT--AC-----C----C-------------TGC-A----TGctcca------------------------------------
i Leontopithecus_rosalia.k141_349454                     C 0 I 2
s Lepilemur_ankaranensis.k141_567626                          5406 43 +     29618 ACGC-A-----------------------G-C-----AGTCCT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATACTc------------------------t-t-tcctc
i Lepilemur_ankaranensis.k141_567626                     C 0 I 2
s Lepilemur_dorsalis.k141_387009                              5403 43 +     31569 ACGC-A-----------------------G-C-----AGTCCT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATACTc------------------------t-t-tcctc
i Lepilemur_dorsalis.k141_387009                         C 0 I 2
s Lepilemur_ruficaudatus.k141_330196                          5413 43 +     24756 ACGC-A-----------------------G-C-----AGTCCT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATACTc------------------------t-t-tcctc
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 2
s Lepilemur_septentrionalis.k141_360456                       5408 43 +     16388 ACGC-A-----------------------G-C-----AGTCCT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATACTc------------------------t-t-tcctc
i Lepilemur_septentrionalis.k141_360456                  C 0 I 2
s Leptonychotes_weddellii.KB714746.1                        809695 39 -   3914936 aTGC-A-----------------------GAA------CTCTTG--A--TTTACTC-----T----CTG--T------Gttac-a----tt-------c------------------------t-t-t----
i Leptonychotes_weddellii.KB714746.1                     C 0 I 5
s Lophocebus_aterrimus.ctg367                               329107 43 -   1826925 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Lophocebus_aterrimus.ctg367                            C 0 I 3
s Loris_lydekkerianus.k141_2031736                            2435 23 +     19643 -----------------------------------------------C-TGC--AC-----T----C-------------TGC-A----TGTCACCTTC------------------------T--------
i Loris_lydekkerianus.k141_2031736                       I 2 I 6
s Loris_tardigradus.ctg83                                  5036093 23 -   6120653 -----------------------------------------------C-TGC--AC-----T----C-------------TGC-A----TGtcaccttc------------------------t--------
i Loris_tardigradus.ctg83                                I 2 I 6
s Lycaon_pictus.CM007581.1                                41610845 42 +  59628241 GTGC-A-----------------------G-A------CTCTT--AA--TTTACTC-----T----CTG--T-A-T----tac-a----tt-------c------------------------t-t-tcctc
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_1757516                              41387 43 -     61512 ATGC-A-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Macaca_arctoides.k141_1757516                          C 0 I 3
s Macaca_assamensis.Contig5                                 369015 43 -  60120075 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Macaca_assamensis.Contig5                              C 0 I 3
s Macaca_cyclopis.k119_263443                                21335 43 +     30207 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Macaca_cyclopis.k119_263443                            C 0 I 3
s Macaca_fascicularis.k141_1397292                           18438 43 -     24934 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Macaca_fascicularis.k141_1397292                       C 0 I 3
s Macaca_fuscata.k119_546792                                 21222 43 +     30527 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Macaca_fuscata.k119_546792                             C 0 I 3
s Macaca_leonina.k141_321385                                 32411 43 -     50087 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Macaca_leonina.k141_321385                             C 0 I 3
s Macaca_maura.k141_1103459                                  42149 43 +     51645 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Macaca_maura.k141_1103459                              C 0 I 3
s Macaca_mulatta.NC_041758.1                                410723 43 - 187317192 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCtccattc------------------------t-t-tcctc
i Macaca_mulatta.NC_041758.1                             C 0 I 3
s Macaca_nemestrina.KQ007038.1                              395606 43 +  25927173 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCtccattc------------------------t-t-tcctc
i Macaca_nemestrina.KQ007038.1                           C 0 I 3
s Macaca_nigra.k141_2818840                                  44738 43 -     62418 ATGT-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Macaca_nigra.k141_2818840                              C 0 I 3
s Macaca_radiata.k141_3557992                                21425 43 +     24253 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Macaca_radiata.k141_3557992                            C 0 I 3
s Macaca_siberu.k141_2185972                                 41182 43 +     59329 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Macaca_siberu.k141_2185972                             C 0 I 3
s Macaca_silenus.Contig273                                  267014 43 +    668171 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Macaca_silenus.Contig273                               C 0 I 3
s Macaca_thibetana.k99_41370                                 18360 43 +     21031 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Macaca_thibetana.k99_41370                             C 0 I 3
s Macaca_tonkeana.k141_1880923                               32092 43 +     33478 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Macaca_tonkeana.k141_1880923                           C 0 I 3
s Macroglossus_sobrinus.MacSob_scaffold_4024                219356 20 -    270270 ATGC-A-----------------------G-C-----TGTCTT---A-ATTT--AC----------------------------------------------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318490 43 +  24302211 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Mandrillus_leucophaeus.scaffold280                     C 0 I 3
s Mandrillus_sphinx.Contig270                               353322 43 -    752769 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Mandrillus_sphinx.Contig270                            C 0 I 3
s Manis_javanica.JSZB01003497.1                             670121 49 -    737560 aTGC-A-----------------------G-A-----CATCTTG--A--TTTACTC-----T----ATTTTTTATTGC--TAc-a----tt-------c------------------------t-t-ttctc
i Manis_javanica.JSZB01003497.1                          C 0 I 8
s Manis_pentadactyla.KN006162.1                             217415 49 +    317179 aTGC-A-----------------------G-A-----CATCTTG--A--TTTACTC-----T----ATTTTTTATTGC--TAc-a----tt-------c------------------------t-t-ttctc
i Manis_pentadactyla.KN006162.1                          C 0 I 8
s Marmota_marmota.CZRN01000018.1                           7489425 37 +  40650429 atgt-a-----------------------g-c-----aA--TTGTTGA-TCT--AG-----T----C-------------tat-g----tt-------c------------------------t-t-tcttc
i Marmota_marmota.CZRN01000018.1                         I 8 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                       146407 41 +    207569 ATGC-A-----------------------G-C-----T-TCTT---A-ATTT--AC-----TCTATGTGC----------TA--A----TT-------C------------------------T-T-CCCTC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_19308             14640 21 -     74585 -------------------------------------------------------------T----TT-C-T--GT----TAC-A----TT-------C------------------------T-T-TTCTC
i Mellivora_capensis.MelCap_flattened_line_19308         I 20 I 1
s Mico_argentatus.k141_582562                                 6441 32 +     17804 ATGC-G-----------------------G-C-----CGC-GT---CA-TCT--AC-----C----C-------------TGT-G----TGctcca------------------------------------
i Mico_argentatus.k141_582562                            C 0 I 2
s Mico_humeralifer.k141_1180625                               7214 32 -     12984 ATGC-G-----------------------G-C-----CGC-GT---CA-TCT--AC-----C----C-------------TGT-G----TGCTCCA------------------------------------
i Mico_humeralifer.k141_1180625                          C 0 I 2
s Mico_schneideri.k141_1877700                                     15176 32 -     26561 ATGC-G-----------------------G-C-----CGC-GT---CA-TCT--AC-----C----C-------------TGT-G----TGctcca------------------------------------
i Mico_schneideri.k141_1877700                                 C 0 I 2
s Microcebus_murinus.CM007674.1                           74981006 43 +  93316391 GTGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCtatattc------------------------c-t-tcctc
i Microcebus_murinus.CM007674.1                          C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_2233                180688 33 +    200668 -------------------------------T-----GGTCTT---C-GTTG--CCTCTA-T----GTG--T--------CAC-G----TT-------C------------------------T-T-C----
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         18480 43 -     27822 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Miopithecus_ogouensis.k141_1534655                     C 0 I 3
s Mirounga_angustirostris.MirAng_flattened_line_54046         4705 39 +     27589 aTGC-A-----------------------GAA------CTCTTG--A--TTTACTC-----T----CTG--T--GT----TAC-A----TT-------C------------------------T-T-T----
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 5
s Mirza_zaza.k141_766280                                     48867 43 -     62432 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCTGTAttc------------------------t-t-tcctc
i Mirza_zaza.k141_766280                                 C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174858 38 +    366855 -------------------------------TGCTGCTGTCTT---A-ACTG--ACTTCA-C----GTG-A---------CAC-A----TT-------C------------------------T-T-C----
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14567 43 -     63510 atgc-a-----------------------g-a-----accctt--gA--TTTACCC-----T----CTG--T-GC-----TGC-C----TT-------A------------------------T-T-TTCTC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 1
s Murina_feae.MurFea_scaffold_17764                          33791 35 +     47283 -----------------------------G-TGCAGATGTCTT---A-ATCT--AC-----T----GCGC----------TAC-A----TT-------C------------------------T-T-T----
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14343677 23 +  14710649 -------------------------------------------------------------T----CT-C-T--GT--Gttac-a----tt-------c------------------------t-t-ttctg
i Mustela_putorius.JH418006.1                            I 20 I 1
s Myotis_brandtii.KE162005.1                               9788224 35 +  10118263 -----------------------------G-TGCAGATGTCTT---A-ATCT--AC-----T----G--CA---C-----TAC-A----TT-------C------------------------T-G-T----
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4378635 36 +   6019432 -----------------------------G-TGCAGATGTCTT---A-ATCT--AC-----T----GCGC----------TAC-a----tt-------c------------------------ttt-t----
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               378455 35 +   4330536 -----------------------------G-TGCAGATGTCTT---A-ATCT--AC-----T----GCGC----------TAC-A----TT-------C------------------------T-T-T----
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        2174 36 +      3929 -----------------------------G-TGCAGATGTCTT---A-ATCT--AC-----T----GCGC----------TAC-A----TT-------T------------------------TTT-T----
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116180 67 +    130748 ---c-attgcctaaactgcaGGAGATGCAG-G-----CATCCT---GA-CCT--GC-----T----CTGCAT-ACTCCTTTCC-A----TT-------T------------------------T-TGTTA--
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              24766 43 +     34575 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Nasalis_larvatus.k141_1350636                          C 0 I 3
s Neomonachus_schauinslandi.NINY01007730.1                11465090 39 -  31847680 aTGC-A-----------------------GAA------CTCTTG--A--TTTACTT-----T----CTG--T------Gttac-a----tt-------c------------------------t-t-t----
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 5
s Noctilio_leporinus.NocLep_scaffold_7894                   123064 39 -    149072 GCAC-A-----------------------G-T-----TGTCTT---A-ACTT--ACTTTA-T----GCGC----------TAC-G----CT-------C------------------------T-T-C----
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           49714 43 -    132029 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----TCCCCCAttc------------------------t-t-tcctc
i Nomascus_annamensis.k141_1771965                       C 0 I 3
s Nomascus_concolor.k141_735679                               5810 43 -     16345 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----TCCCCCAttc------------------------t-t-tcctc
i Nomascus_concolor.k141_735679                          C 0 I 3
s Nomascus_gabriellae.k141_57920                             11693 43 +     22201 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----TCCCCCAttc------------------------t-t-tcctc
i Nomascus_gabriellae.k141_57920                         C 0 I 3
s Nomascus_siki_b.tarseq_93                            8410030 43 -  22158432 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----TCCCCCAttc------------------------t-t-tcctc
i Nomascus_siki_b.tarseq_93                          C 0 I 3
s Nomascus_siki_a.k141_941534                                  22093 43 -     54323 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----TCCCCCAttc------------------------t-t-tcctc
i Nomascus_siki_a.k141_941534                              C 0 I 3
s Nyctereutes_procyonoides.CAJHUB010000658.1                194460 42 +   9404916 gtgc-a-----------------------g-A------CTCTT--AA--TTTACTC-----T----CTG--T-A-T----tac-a----tt-------c------------------------t-t-tcctc
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                             93631209 23 + 196305487 -----------------------------------------------C-TAC--GC-----T----G-------------TGC-A----TGTCACCTTC------------------------T--------
i Nycticebus_bengalensis.LG01                            I 2 I 6
s Nycticebus_coucang.k141_8166032                              598 23 +      2758 -----------------------------------------------C-TAC--GC-----T----G-------------TGC-A----TGTCACCTTC------------------------T--------
i Nycticebus_coucang.k141_8166032                        I 2 I 6
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559488 23 - 199412804 -----------------------------------------------C-TAC--AC-----T----C-------------TGC-A----TGTCACCTTC------------------------T--------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 2 I 6
s Odobenus_rosmarus.KB229312.1                             1447875 39 +   2017862 aTGC-A-----------------------GAA------CTCTTG--A--TTTACTC-----T----CTG--T--GT----Tac-a----tt-------c------------------------t-t-t----
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35523 42 +    559221 gtgc-a-----------------------g-A------CTCTT--AA--TTTACTC-----T----CTG--T-A-T----TAC-A----TT-------C------------------------T-T-TCCTC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_85057                         22734 23 -     23432 -----------------------------------------------C-TGA--AC-----T----C-------------TGC-A----TGTCACCTTC------------------------T--------
i Otolemur_crassicaudatus.k141_85057                     I 2 I 6
s Otolemur_garnettii.GL873799.1                             347299 23 +   1103335 -----------------------------------------------C-TGA--AC-----T----C-------------TGT-A----TGTCACCTTC------------------------T--------
i Otolemur_garnettii.GL873799.1                          I 2 I 6
s Pan_troglodytes.CM009242.2                               1467922 43 - 189151597 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----Tcttccattc------------------------t-t-tcctc
i Pan_troglodytes.CM009242.2                             C 0 I 3
s Panthera_onca.PanOnc_flattened_line_3271                   20621 43 -    230217 atgc-a-----------------------g-a-----actctt--gA--TTTACTC-----T----CTG--T-GC-----TAC-C----TT-------A------------------------T-T-TTCTC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                              18457947 43 -  18783137 aTGC-A-----------------------G-A-----ACTCTTG--A--TTTACTC-----T----CTG--T-GC-----TAC-C----TT-------A------------------------T-T-TTCTC
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               3968675 21 +   8748460 aTGC-A-----------------------G-A-----ACTCTTG--A--TTTACT-----------------------------------------------------------------------------
i Panthera_tigris.KE722367.1                             C 0 I 21
s Papio_anubis.CM001495.2                                   239334 43 - 183742232 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCtccattc------------------------t-t-tcctc
i Papio_anubis.CM001495.2                                C 0 I 3
s Papio_cynocephalus.k141_1507553                             5801 43 +     21308 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Papio_cynocephalus.k141_1507553                        C 0 I 3
s Papio_hamadryas.Contig39                                  286838 43 -  20919399 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Papio_hamadryas.Contig39                               C 0 I 3
s Papio_kindae.k141_2214839                                  18454 43 -     27687 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Papio_kindae.k141_2214839                              C 0 I 3
s Papio_papio.k141_799093                                    11590 43 +     16796 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Papio_papio.k141_799093                                C 0 I 3
s Papio_ursinus.k141_2278143                                 18400 43 -     23640 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Papio_ursinus.k141_2278143                             C 0 I 3
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11539 43 +     78924 ATGC-A-----------------------G-A-----ACTCTTG--A--TTTACTC-----T----CTG--T-GC-----TAC-C----TT-------A------------------------T-T-ATCTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_1921260                          21298 23 +     31479 -----------------------------------------------C-TGC--AC-----T----C-------------TGC-A----TGTCACCTTC------------------------A--------
i Perodicticus_ibeanus.k141_1921260                      I 2 I 6
s Perodicticus_potto.k141_1854441                            13669 23 -     24908 -----------------------------------------------C-TGC--AC-----T----C-------------TGC-A----TGTCACCTTC------------------------A--------
i Perodicticus_potto.k141_1854441                        I 2 I 6
s Piliocolobus_badius.k141_2495623                            5220 43 +      7560 ATGC-G-----------------------G-C-----AGGCTT---GA-TGT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Piliocolobus_badius.k141_2495623                       C 0 I 3
s Piliocolobus_gordonorum.k141_905727                        60927 43 -     63152 ATGC-G-----------------------G-C-----AGGCTT---GA-TGT--AC-----C----C-------------TGT-G----CCCTCCAttc------------------------t-t-tcctc
i Piliocolobus_gordonorum.k141_905727                    C 0 I 3
s Piliocolobus_kirkii.k141_579682                            43526 43 +     45295 ATGC-G-----------------------G-C-----AGGCTT---GA-TGT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Piliocolobus_kirkii.k141_579682                        C 0 I 3
s Piliocolobus_tephrosceles.PDMG02034973.1                    1205 43 +      5735 ATGC-G-----------------------G-C-----AGGCTT---GA-TGT--AC-----C----C-------------TGT-G----TCCtccattc------------------------t-t-tcctc
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 I 3
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46061 39 +     46691 -----------------------------G-TGCCGATGTCTT---A-ATCT--AC-----TCTGTGTG----------ctat-c----tt-------c------------------------t-t-t----
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61409 33 +    207309 ACGC-A-----------------------G-C-----AGGCTT---CA-TCT--AC-----C----C-------------TAT-G----TGctcca------------------------------------
i Pithecia_albicans.k141_1239476                         C 0 I 2
s Pithecia_chrysocephala.k141_785207                          2529 33 -     25401 ACGc-a-----------------------g-c-----agcctt---ca-tct--ac-----c----c-------------tac-g----tgctcca------------------------------------
i Pithecia_chrysocephala.k141_785207                     C 0 I 2
s Pithecia_hirsuta.k141_640380                               28244 33 +     58159 ACGc-a-----------------------g-c-----aggctt---ca-tct--ac-----c----c-------------tac-g----tgctcca------------------------------------
i Pithecia_hirsuta.k141_640380                           C 0 I 2
s Pithecia_mittermeieri.k141_1280039                         28520 33 +     63561 ACGc-a-----------------------g-c-----aggctt---ca-tct--ac-----c----c-------------tac-g----tgctcca------------------------------------
i Pithecia_mittermeieri.k141_1280039                     C 0 I 2
s Pithecia_pissinattii.k141_878371                           28283 33 +     51148 ACGc-a-----------------------g-c-----aggctt---ca-tct--ac-----c----c-------------tac-g----tgctcca------------------------------------
i Pithecia_pissinattii.k141_878371                       C 0 I 2
s Pithecia_pithecia.tarseq_165                              553276 33 -   4542175 ACGc-a-----------------------g-c-----agcctt---ca-tct--ac-----c----c-------------tac-g----tgctcca------------------------------------
i Pithecia_pithecia.tarseq_165                           C 0 I 2
s Pithecia_vanzolinii.k141_1369553                           28267 33 +     51125 ACGc-a-----------------------g-c-----aggctt---ca-tct--ac-----c----c-------------tac-g----tgctcca------------------------------------
i Pithecia_vanzolinii.k141_1369553                       C 0 I 2
s Plecturocebus_bernhardi.k141_2549090                        4692 32 +     39866 ACGC-A-----------------------G-C-----AGCCT----CA-TCT--AC-----C----C-------------CAC-G----TGTGcca------------------------------------
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 2
s Plecturocebus_caligatus.k141_1382851                       39180 32 -     87950 ACGC-A-----------------------G-C-----AGCCT----CA-TCT--AC-----C----C-------------CAC-G----TGCGcca------------------------------------
i Plecturocebus_caligatus.k141_1382851                   C 0 I 2
s Plecturocebus_cinerascens.k141_1164729                     39573 32 -     88961 ACGC-A-----------------------G-C-----AGCCT----CA-TCT--AC-----C----C-------------CAC-C----TGCGcca------------------------------------
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 2
s Plecturocebus_cupreus.k141_2351393                          4273 31 -     39403 ACGC-A-----------------------G-C-----AGCCT----CA-TCT--AC-----C----C--------------AC-G----TGCGcca------------------------------------
i Plecturocebus_cupreus.k141_2351393                     C 0 I 2
s Plecturocebus_dubius.k141_1058799                          39226 32 +     87928 ACGC-A-----------------------G-C-----AGCCT----CA-TCT--AC-----C----C-------------CAC-G----TGCGcca------------------------------------
i Plecturocebus_dubius.k141_1058799                      C 0 I 2
s Plecturocebus_grovesi.k141_2013005                          4270 32 -     60166 ACGC-A-----------------------G-C-----AGCCT----CA-TCT--AC-----C----C-------------CAC-G----TGCGcca------------------------------------
i Plecturocebus_grovesi.k141_2013005                     C 0 I 2
s Plecturocebus_hoffmannsi.k141_3303950                      11206 32 -     67232 ACGC-A-----------------------G-C-----AGCCT----CA-TCT--AC-----C----C-------------CAC-G----TGCGcca------------------------------------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 2
s Plecturocebus_miltoni.k141_349282                          39122 32 -     90634 ACGC-A-----------------------G-C-----AGCCT----CA-TCT--AC-----C----C-------------CAC-G----AGCGcca------------------------------------
i Plecturocebus_miltoni.k141_349282                      C 0 I 2
s Plecturocebus_moloch.k141_1031110                          40590 32 +     89403 ACGC-A-----------------------G-C-----AGCCT----CA-TCT--AC-----C----C-------------CAC-G----TGCGcca------------------------------------
i Plecturocebus_moloch.k141_1031110                      C 0 I 2
s Pongo_abelii.CM009266.2                                   173539 43 - 189387572 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----tcttccattc------------------------t-t-tcctc
i Pongo_abelii.CM009266.2                                C 0 I 3
s Pongo_pygmaeus.ctg66                                      188537 43 -   9816681 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----TCTTCCAttc------------------------t-t-tcctc
i Pongo_pygmaeus.ctg66                                   C 0 I 3
s Presbytis_comata.k141_1230337                              23704 43 +     69807 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Presbytis_comata.k141_1230337                          C 0 I 3
s Presbytis_mitrata.k141_584736                              40899 43 -     80239 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Presbytis_mitrata.k141_584736                          C 0 I 3
s Prolemur_simus.MPIZ01000396.1                            1979919 43 +   4620579 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCTATATTC------------------------T-T-TCCTC
i Prolemur_simus.MPIZ01000396.1                          C 0 I 2
s Propithecus_coquerelli.NW_012148875.1                    1562493 43 -   2598838 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCGatattc------------------------t-t-tcctc
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 2
s Propithecus_coronatus.k141_209299                            139 43 -      7103 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----G-------------TGT-G----TGCGATAttc------------------------t-t-tcctt
i Propithecus_coronatus.k141_209299                      C 0 I 2
s Propithecus_diadema.k141_153680                              735 43 -     11706 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCGATAttc------------------------t-t-tcctc
i Propithecus_diadema.k141_153680                        C 0 I 2
s Propithecus_edwardsi.k141_635656                            4470 43 -     30655 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----G-------------TGT-G----TGCGATAttc------------------------t-t-tcctc
i Propithecus_edwardsi.k141_635656                       C 0 I 2
s Propithecus_perrieri.k141_1496898                          30795 43 +     46564 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCGATAttc------------------------t-t-tcctc
i Propithecus_perrieri.k141_1496898                      C 0 I 2
s Propithecus_tattersalli.k141_1127767                       91086 43 -     98465 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCGATAttc------------------------t-t-tcctc
i Propithecus_tattersalli.k141_1127767                   C 0 I 2
s Propithecus_verreauxi.k141_1047036                          4708 43 +     35169 ATGC-A-----------------------G-C-----AGTCTT---GA-TCT--AC-----T----C-------------TGT-G----TGCGATAttc------------------------t-t-tcctc
i Propithecus_verreauxi.k141_1047036                     C 0 I 2
s Pteronotus_parnellii.KE847780.1                            47934 33 -     66298 -------------------------------C-----TGTCTT---C-ATTG--ACTCTA-T----GTGC----------CAT-G----TT-------C------------------------T-T-C----
i Pteronotus_parnellii.KE847780.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4781 23 -     10349 -------------------------------------------------------------T----CT-C-T--GT-GT-TAC-A----TT-------C------------------------T-T-TTCTC
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 20 C 0
s Pteropus_alecto.KB030862.1                               5836829 43 -  28871421 ATGC-A-----------------------G-C-----TCTCTT---A-ATTT--AC-----TTTATGCGC----------tat-a----tt-------c------------------------t-t-tcctc
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Pteropus_vampyrus.KN525825.1                             3533404 43 -   4952924 ATGC-A-----------------------g-c-----tctctt---a-attt--at-----tttatg----------cgctat-a----tt-------c------------------------t-t-tcctc
i Pteropus_vampyrus.KN525825.1                           C 0 I 3
s Puma_concolor.QAVW01001104.1                            18095499 43 +  38429054 aTGC-A-----------------------G-A-----ACTCTTG--A--TTTACTC-----T----CTG--T-GC-----tac-c----tt-------a------------------------t-t-ttctc
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             23091 43 +     91421 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Pygathrix_cinerea.k141_1153803                         C 0 I 3
s Pygathrix_nigripes_b.ctg100                                  149583 43 -   7812017 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Pygathrix_nigripes_b.ctg100                               C 0 I 3
s Pygathrix_nigripes_a.k141_215492                              3960 43 +     72585 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Pygathrix_nigripes_a.k141_215492                         C 0 I 3
s Rhinolophus_sinicus.LVEH01000134.1                       2909469 71 +   3329780 ATGC-A-----------------------A-C-----TGTCTT---A-ATTT--AC-----TCTATGTGC----------ta-cattcttc-------cttccttccttccttccttccttcct-t-ccttc
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 7
s Rhinopithecus_bieti.k119_221883                            24924 43 +     27361 ATGT-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Rhinopithecus_bieti.k119_221883                        C 0 I 3
s Rhinopithecus_roxellana.NC_044550.1                    104118283 43 + 195417433 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCtccattc------------------------t-t-tcctc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 3
s Rhinopithecus_strykeri.ctg102                             232532 43 -   7961872 ATGT-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Rhinopithecus_strykeri.ctg102                          C 0 I 3
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70874 43 -    116970 ATGC-A-----------------------G-C-----TGTCTT---A-AATT--AC-----TTTATGTGC----------TAT-A----tt-------c------------------------t-t-tcctt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 3
s Saguinus_bicolor.k141_1429097                                405 25 +     27962 ATGC-A-----------------------G-C-----AGCCTT---CG-TCT--AC-----C----C-------------GGC-------------------------------------------------
i Saguinus_bicolor.k141_1429097                          C 0 I 9
s Saguinus_geoffroyi.k141_3779887                              405 25 +      6077 ATGC-A-----------------------G-C-----AGCCTT---CG-TCT--AC-----C----C-------------AGC-------------------------------------------------
i Saguinus_geoffroyi.k141_3779887                        C 0 I 9
s Saguinus_imperator.k141_1898058                              426 25 +      5971 ATGC-C-----------------------G-C-----GGCCTC---CG-TCT--AC-----C----C-------------GGC-------------------------------------------------
i Saguinus_imperator.k141_1898058                        C 0 I 9
s Saguinus_inustus.k141_2469308                                478 25 +      5932 ATGC-C-----------------------G-C-----AGCCTG---CC-TCT--AC-----C----C-------------GGC-------------------------------------------------
i Saguinus_inustus.k141_2469308                          C 0 I 7
s Saguinus_labiatus.k141_1571581                               633 20 -      2099 -----------------------------G-C-----GGCCCG---CG-TCT--AC-----G----C-------------GGC-------------------------------------------------
i Saguinus_labiatus.k141_1571581                         I 4 I 7
s Saguinus_midas.LG03                                       387664 25 - 209938924 ATGC-A-----------------------G-C-----AGCCTT---CG-TCT--AC-----C----C-------------GGC-------------------------------------------------
i Saguinus_midas.LG03                                    C 0 I 9
s Saguinus_mystax.k141_8077960                                 433 20 +      5979 -----------------------------G-C-----GGCCCG---CG-TCT--AC-----G----C-------------GGC-------------------------------------------------
i Saguinus_mystax.k141_8077960                           I 4 I 7
s Saguinus_oedipus.k141_1466288                                804 25 -      4301 ATGC-A-----------------------G-C-----AGCCTT---CG-TCT--AC-----C----C-------------GGC-------------------------------------------------
i Saguinus_oedipus.k141_1466288                          C 0 I 9
s Sapajus_apella.ctg103                                     234877 11 +   5703754 ATGC-A-----------------------G-C-----AGcc-------------------------------------------------------------------------------------------
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4467 11 +     21866 ATGC-A-----------------------G-C-----AGcc-------------------------------------------------------------------------------------------
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112597 38 +    313613 ATGC-A-----------------------G-T-----CATGTT----A-TTT--AC-----C----ATGC----------TGC-A----TT-------C------------------------T-T-TCCTC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 3
s Semnopithecus_entellus.k141_158471                         21414 43 +     27374 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Semnopithecus_entellus.k141_158471                     C 0 I 3
s Semnopithecus_hypoleucos.k141_1910531                      24931 43 +     58920 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCGttc------------------------t-t-tcctc
i Semnopithecus_hypoleucos.k141_1910531                  C 0 I 3
s Semnopithecus_johnii.k141_843753                           11426 43 -     45317 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Semnopithecus_johnii.k141_843753                       C 0 I 3
s Semnopithecus_priam.k141_714795                            19083 43 -     42441 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Semnopithecus_priam.k141_714795                        C 0 I 3
s Semnopithecus_schistaceus.k141_1432920                     21765 43 -     29113 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Semnopithecus_schistaceus.k141_1432920                 C 0 I 3
s Semnopithecus_vetulus.k141_244474                          24837 43 -     48123 ATGC-A-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Semnopithecus_vetulus.k141_244474                      C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_126            1854567 39 -   1910179 acat-a-----------------------g-c-----tgtctt---gA-Ttt--ac-----t----c----------tgctat-g----tt-------c------------------------t-t-tcctt
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1856665 37 +   3870691 atgt-a-----------------------g-c-----aA--TTGTTGA-TCT--AG-----T----C-------------tat-g----tt-------c------------------------t-t-tcttc
i Spermophilus_dauricus.KZ294078.1                       I 8 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525              3191 43 -     97271 aTGC-A-----------------------AAC------CTCTTG--A--CTTACTC-----T----CTG--T--GT----TAC-A----TT-------C------------------------T-T-TTCTC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629             121161 43 +    196729 atgc-a-----------------------g-a-----actctt--gA--TTTACCC-----G----CTG--T-GC-----TGC-C----TT-------A------------------------T-T-TTTTC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Symphalangus_syndactylus.tarseq_199                       387011 43 +   1523678 ATGC-A-----------------------G-C-----AGCCTT---GA-TCT--AC-----C----C-------------TAT-G----TCCCCCAttc------------------------t-t-tcctc
i Symphalangus_syndactylus.tarseq_199                    C 0 I 3
s Tamandua_tetradactyla.TamTet_scaffold_445853                1049 67 -      2009 ---c-attgcctaaactgcaGGAGATGCAG-G-----CATCTT---GA-CCT--GC-----T----CTGCAT-ATTCCTTTCC-A----TT-------T------------------------T-TGTTA--
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187659 43 +    199430 acac-a-----------------------g-c-----tgtCTTG--A--TTTACTC-----T----ATG--T-GC-----TAC-A----tt-------c------------------------t-t-tcctc
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    101614 43 -    539355 acgt-a-----------------------g-c-----tgtTTTG--A--TTTACTC-----T----ATG--T-GC-----TAC-A----tt-------c------------------------t-t-tcctc
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 3
s Tarsius_lariang.k141_1780720                                3803 43 +      6850 atgc-a-----------------------a-c-----tgtCTC---AA-TCT--AC-----T----C-------------TAT-G----TGCTACACTC------------------------T-T-TCCTC
i Tarsius_lariang.k141_1780720                           C 0 I 3
s Tarsius_wallacei.k141_226975                                3842 43 +     20590 atgc-a-----------------------a-c-----tgtCTC---GA-TCT--AC-----T----C-------------TAT-G----TGCTACACTC------------------------T-T-TCCTC
i Tarsius_wallacei.k141_226975                           C 0 I 3
s Theropithecus_gelada.CM009954.1                           349319 43 - 186847797 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCtccattc------------------------t-t-tcctc
i Theropithecus_gelada.CM009954.1                        C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_31955                   16426 34 -     31044 ---c-a-----------------------g-c-----agc-cc---ga-tct--ac-----T----CTG--T-GC-----TGC-A-----T-------C------------------------T-T-TCT--
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475743 31 -    610378 -------------------------------C-----GGTCCT---C-ATTG--ACT--G-T----GTGC----------CGT-G----tt-------c------------------------t-c-c----
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_1189070                        16978 43 +     26378 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Trachypithecus_auratus.k141_1189070                    C 0 I 3
s Trachypithecus_crepusculus.k141_539312                     29659 43 -     78344 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Trachypithecus_crepusculus.k141_539312                 C 0 I 3
s Trachypithecus_cristatus.k141_180416                       16299 43 +     25722 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Trachypithecus_cristatus.k141_180416                   C 0 I 3
s Trachypithecus_francoisi.k141_1453105                      24522 43 -     62838 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Trachypithecus_francoisi.k141_1453105                  C 0 I 3
s Trachypithecus_geei.k141_1001272                           24639 43 +     46913 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----CCCTCCAttc------------------------t-t-tcctc
i Trachypithecus_geei.k141_1001272                       C 0 I 3
s Trachypithecus_germaini.k141_57262                          5449 43 -     28527 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Trachypithecus_germaini.k141_57262                     C 0 I 3
s Trachypithecus_hatinhensis.k141_31479                      26461 43 -     64340 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 3
s Trachypithecus_laotum.k141_928651                          24498 43 -     63452 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Trachypithecus_laotum.k141_928651                      C 0 I 3
s Trachypithecus_leucocephalus.k141_96450                     5940 43 +     22490 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Trachypithecus_leucocephalus.k141_96450                C 0 I 3
s Trachypithecus_melamera.k141_324021                         3560 43 +      4141 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Trachypithecus_melamera.k141_324021                    C 0 I 3
s Trachypithecus_obscurus.k141_848057                         6366 43 -     13050 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Trachypithecus_obscurus.k141_848057                    C 0 I 3
s Trachypithecus_phayrei.ctg124                             251601 43 -   6242583 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----TCCTCCAttc------------------------t-t-tcctc
i Trachypithecus_phayrei.ctg124                          C 0 I 3
s Trachypithecus_pileatus.k141_2862967                       57333 43 +     59866 ATGC-G-----------------------G-C-----AGGCTT---GA-TCT--AC-----C----C-------------TGT-G----CCCTCCAttc------------------------t-t-tcctc
i Trachypithecus_pileatus.k141_2862967                   C 0 I 3
s Tupaia_chinensis.KB320699.1                              1826232 36 -   4065304 ATGC-A-----------------------G-A-----AGTCTT---GA-TTT--AA-----T----T-------------TAC-T----TC-------C------------------------T-A-TTCTC
i Tupaia_chinensis.KB320699.1                            C 0 I 3078
s Tupaia_tana.TupTan_flattened_line_394                       3582 36 -     70247 ATGC-A-----------------------G-C-----AGTCTT---GA-TTT--AC-----T----C-------------TAC-T----TC-------C------------------------T-A-CTCTC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 276
s Uropsilus_gracilis.UroGra_scaffold_7153                   103824 38 -    105689 ATGC-A-----------------------G-T-----TGTCTT----A-TGT--AC-----C----ATG--T--------TGC-A----TT-------C------------------------T-T-TCCTT
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 3
s Ursus_maritimus.KK499267.1                                177812 43 +   5085361 aTGC-A-----------------------GAA------CTTTTG--A--TTTACCC-----T----TTG--T------Gttac-a----tt-------c------------------------t-t-ttctc
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_787544                                  21551 43 -     30710 ATGc-a-----------------------g-c-----agtctt---ga-tct--ac-----t----c-------------tgt-g----tgctatattc------------------------t-t-tgctc
i Varecia_rubra.k141_787544                              C 0 I 2
s Varecia_variegata.k141_289850                              20459 43 -    147434 ATGc-a-----------------------g-c-----agtctt---ga-tct--ac-----t----c-------------tgt-g----tgctatattc------------------------t-t-tgctc
i Varecia_variegata.k141_289850                          C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_12041                101207 42 -    112863 GTGC-A-----------------------G-A------CTCTT--AA--TTTACTC-----T----CTG--T-A-T----TAT-A----TT-------C------------------------T-T-TACTC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 1
s Xerus_inauris.XerIna_scaffold_2302                        162823 34 -    224448 ATGT-A-----------------------G-C-----AA--TT---GA-TCT--AG-----T----C-------------TAT-G----TT-------C------------------------T-T-TCTTC
i Xerus_inauris.XerIna_scaffold_2302                     I 225 I 3
s Zalophus_californianus.ZalCal_flattened_line_17732         25095 39 -     86975 aTGC-A-----------------------GAA------CTCTTG--A--TTTACTC-----T----CTG--T--GT----TAC-A----TT-------C------------------------T-T-T----
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39076483 861 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        725  6 +     36723 CT----TCTT
s Allenopithecus_nigroviridis.k141_3755588                   44037  6 +     53615 cc----tctt
i Allenopithecus_nigroviridis.k141_3755588               I 3 C 0
s Allochrocebus_lhoesti.k141_441277                          39852  6 +     44087 cc----tctt
i Allochrocebus_lhoesti.k141_441277                      I 3 C 0
s Alouatta_belzebul.k141_1011583                             68763  6 -     84148 cc----tctt
i Alouatta_belzebul.k141_1011583                         I 2 C 0
s Alouatta_caraya.k141_1109140                               40986  6 -     78289 cc----tctt
i Alouatta_caraya.k141_1109140                           I 2 C 0
s Alouatta_discolor.k141_2561099                             40434  6 +     55831 cc----tctt
i Alouatta_discolor.k141_2561099                         I 2 C 0
s Alouatta_juara.k141_1687208                                38875  6 -     64179 cc----tctt
i Alouatta_juara.k141_1687208                            I 2 C 0
s Alouatta_macconnelli.k141_361275                           20518  6 -     24835 cc----tctt
i Alouatta_macconnelli.k141_361275                       I 2 C 0
s Alouatta_nigerrima.k141_376068                             37501  6 +     45454 cc----tctt
i Alouatta_nigerrima.k141_376068                         I 2 C 0
s Alouatta_palliata.k141_638677                              43200  6 +     70886 cc----tctt
i Alouatta_palliata.k141_638677                          I 2 C 0
s Alouatta_puruensis.k141_251022                              5327  6 +     30854 cc----tctt
i Alouatta_puruensis.k141_251022                         I 2 C 0
s Alouatta_seniculus.k141_928287                             29466  6 +     42133 cc----tctt
i Alouatta_seniculus.k141_928287                         I 2 C 0
s Aotus_azarae.k141_118258                                   47275  6 -     65372 cc----tctt
i Aotus_azarae.k141_118258                               I 2 C 0
s Aotus_griseimembra.k141_982342                             41021  6 +     43593 cc----tctt
i Aotus_griseimembra.k141_982342                         I 2 C 0
s Aotus_nancymaae.KZ198451.1                                669033  6 +   5030052 CC----TCTT
i Aotus_nancymaae.KZ198451.1                             I 2 C 0
s Aotus_trivirgatus.k141_192090                              20675  6 -     23494 cc----tctt
i Aotus_trivirgatus.k141_192090                          I 2 C 0
s Aotus_vociferans.k141_944972                                5811  6 +      8415 cc----tctt
i Aotus_vociferans.k141_944972                           I 2 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11987  6 -     32367 CC----TATT
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 3 C 0
s Arctocebus_calabarensis.k141_1364444                       15906  6 -     45910 CC----TTGT
i Arctocebus_calabarensis.k141_1364444                   I 6 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271261  6 +  21539123 cc----tctt
i Ateles_geoffroyi_b.tarseq_1536                            I 2 C 0
s Ateles_belzebuth.k141_1572163                               7432  6 +     48076 cc----tctt
i Ateles_belzebuth.k141_1572163                          I 2 C 0
s Ateles_chamek.k141_615173                                   2566  6 -     28759 cc----tctt
i Ateles_chamek.k141_615173                              I 2 C 0
s Ateles_geoffroyi_a.k141_1283730                              30118  6 +     44353 cc----tctt
i Ateles_geoffroyi_a.k141_1283730                          I 2 C 0
s Ateles_marginatus.k141_970259                              45493  6 -     71267 cc----tctt
i Ateles_marginatus.k141_970259                          I 2 C 0
s Ateles_paniscus.k141_866194                                19549  6 -     33135 cc----tctt
i Ateles_paniscus.k141_866194                            I 2 C 0
s Avahi_laniger.k141_2756659                                  2669  6 +     11645 cc----tgtt
i Avahi_laniger.k141_2756659                             I 2 C 0
s Avahi_peyrierasi.k141_1823318                               2671  6 -     19611 cc----tgtt
i Avahi_peyrierasi.k141_1823318                          I 2 C 0
s Cacajao_ayresi.k141_96119                                   4453  6 +     28062 cc----tctt
i Cacajao_ayresi.k141_96119                              I 2 C 0
s Cacajao_calvus.k141_89051                                  39747  6 -     91139 cc----tctt
i Cacajao_calvus.k141_89051                              I 2 C 0
s Cacajao_hosomi.k141_81245                                  17273  6 +     95584 cc----tctt
i Cacajao_hosomi.k141_81245                              I 2 C 0
s Cacajao_melanocephalus.k141_619699                         17186  6 +    119600 cc----tctt
i Cacajao_melanocephalus.k141_619699                     I 2 C 0
s Callibella_humilis.k141_1233062                             6691  6 +     18648 cc----tctc
i Callibella_humilis.k141_1233062                        I 2 C 0
s Callimico_goeldii.k141_1609886                              6367  6 -     13885 cc----tctc
i Callimico_goeldii.k141_1609886                         I 2 C 0
s Callithrix_geoffroyi.k119_473390                           15053  6 +     17162 cc----tctc
i Callithrix_geoffroyi.k119_473390                       I 2 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450009  6 + 189096842 CC----TCTC
i Callithrix_jacchus.pat_scaffold_3                      I 2 C 0
s Callithrix_kuhlii.k119_404482                              16302  6 -     18408 cc----tctc
i Callithrix_kuhlii.k119_404482                          I 2 C 0
s Carlito_syrichta.NW_007259797.1                           267102  6 +    496798 CT----TATT
i Carlito_syrichta.NW_007259797.1                        I 3 I 58
s Cebuella_niveiventris.k141_592277                           1587  6 -     12580 cc----tctc
i Cebuella_niveiventris.k141_592277                      I 2 C 0
s Cebuella_pygmaea.k141_145798                               39473  6 +     53515 cc----tctc
i Cebuella_pygmaea.k141_145798                           I 2 C 0
s Cebus_albifrons.Contig27                                  367665  6 -  26074798 cc----tctt
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4554  6 -     34880 cc----tctt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63649  6 -     89041 cc----tctt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            267  6 -      1636 ct----tctt
i Cephalopachus_bancanus.k141_72622                      I 3 I 58
s Ceratotherium_simum.JH767749.1                          15488685  6 -  27778364 ct----tctt
i Ceratotherium_simum.JH767749.1                         I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15518  6 +     27315 ct----tctt
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 3 C 0
s Cercocebus_atys.KQ010504.1                                137197  6 -   4669795 cc----tctt
i Cercocebus_atys.KQ010504.1                             I 3 C 0
s Cercocebus_chrysogaster.k141_1522556                       40938  6 +     47900 cc----tctt
i Cercocebus_chrysogaster.k141_1522556                   I 3 C 0
s Cercocebus_lunulatus.k141_2779015                          40770  6 -     44860 cc----tctt
i Cercocebus_lunulatus.k141_2779015                      I 3 C 0
s Cercocebus_torquatus.k141_2159127                          40752  6 -    148725 cc----tctt
i Cercocebus_torquatus.k141_2159127                      I 3 C 0
s Cercopithecus_ascanius.k141_3120866                        23811  6 -     40656 cc----tctt
i Cercopithecus_ascanius.k141_3120866                    I 3 C 0
s Cercopithecus_cephus.k141_4183004                           3746  6 +     20796 cc----tctt
i Cercopithecus_cephus.k141_4183004                      I 3 C 0
s Cercopithecus_diana.k141_132293                             8001  6 -     17524 cc----tctt
i Cercopithecus_diana.k141_132293                        I 3 C 0
s Cercopithecus_hamlyni.k141_566925                          23690  6 -     34525 cc----tctt
i Cercopithecus_hamlyni.k141_566925                      I 3 C 0
s Cercopithecus_lowei.k141_2101310                            8401  6 -     25376 cc----tctt
i Cercopithecus_lowei.k141_2101310                       I 3 C 0
s Cercopithecus_albogularis.ctg5                                  360966  6 -  39242232 cc----tctt
i Cercopithecus_albogularis.ctg5                               I 3 C 0
s Cercopithecus_mona.ctg39                                  266712  6 +  21565898 cc----tctt
i Cercopithecus_mona.ctg39                               I 3 C 0
s Cercopithecus_neglectus.k141_858615                        28164  6 -     45857 cc----tctt
i Cercopithecus_neglectus.k141_858615                    I 3 C 0
s Cercopithecus_nictitans.k141_2995370                       23955  6 -     32606 cc----tctt
i Cercopithecus_nictitans.k141_2995370                   I 3 C 0
s Cercopithecus_petaurista.k141_42573                          144  6 +      8499 cc----tctt
i Cercopithecus_petaurista.k141_42573                    I 3 C 0
s Cercopithecus_pogonias.k141_6079                           21654  6 +     70610 cc----tctt
i Cercopithecus_pogonias.k141_6079                       I 3 C 0
s Cercopithecus_roloway.k141_3012935                         18519  6 +     36323 cc----tctt
i Cercopithecus_roloway.k141_3012935                     I 3 C 0
s Cheirogaleus_major.k141_666340                             27087  6 -     33796 cc----tatt
i Cheirogaleus_major.k141_666340                         I 2 C 0
s Cheirogaleus_medius.k141_759766                             1282  6 -     15404 cc----tatt
i Cheirogaleus_medius.k141_759766                        I 2 C 0
s Cheracebus_lucifer.k141_2312002                             5551  6 -     32913 cc----tctt
i Cheracebus_lucifer.k141_2312002                        I 2 C 0
s Cheracebus_lugens.k141_1179667                             15964  6 -     40346 cc----tctt
i Cheracebus_lugens.k141_1179667                         I 2 C 0
s Cheracebus_regulus.k141_471822                             16228  6 +    216457 cc----tctt
i Cheracebus_regulus.k141_471822                         I 2 C 0
s Cheracebus_torquatus.k141_890198                           16007  6 +     39636 cc----tctt
i Cheracebus_torquatus.k141_890198                       I 2 C 0
s Chiropotes_albinasus.k141_1946120                            441  6 +      5346 Cc----tctc
i Chiropotes_albinasus.k141_1946120                      I 9 C 0
s Chiropotes_israelita.k141_313004                           39094  6 -    112038 cc----tctt
i Chiropotes_israelita.k141_313004                       I 2 C 0
s Chiropotes_sagulatus.k141_1113111                           4666  6 +     34062 cc----tctt
i Chiropotes_sagulatus.k141_1113111                      I 2 C 0
s Chlorocebus_aethiops.ctg25                                339415  6 +  18827391 cc----tctt
i Chlorocebus_aethiops.ctg25                             I 3 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6026  6 -     44032 cc----tctt
i Chlorocebus_pygerythrus.k141_3063162                   I 3 C 0
s Chlorocebus_sabaeus.CM001947.1                            300741  6 - 135778131 cc----tctt
i Chlorocebus_sabaeus.CM001947.1                         I 3 C 0
s Colobus_angolensis.KN981557.1                             405274  6 -   2368649 cc----tctt
i Colobus_angolensis.KN981557.1                          I 3 C 0
s Colobus_guereza.LG01                                      374433  6 - 200372422 cc----tctt
i Colobus_guereza.LG01                                   I 3 C 0
s Colobus_polykomos.k141_1559707                              5158  6 -      6605 cc----tctt
i Colobus_polykomos.k141_1559707                         I 3 C 0
s Condylura_cristata.JH655891.1                           35803585  6 +  53390261 cc----atTT
i Condylura_cristata.JH655891.1                          I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8991  6 +     10921 cc----cctt
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 3 C 0
s Daubentonia_madagascariensis.ctg71                        289116  6 +  12879189 cc----tttt
i Daubentonia_madagascariensis.ctg71                     I 2 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660972  6 -   1390856 cc----tctt
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135764  3 -    198055 -------ctt
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 C 0
s Eidolon_helvum.AWHC01266696.1                               2317  6 +     19438 cc----tctt
i Eidolon_helvum.AWHC01266696.1                          I 3 C 0
s Equus_asinus.JREZ01000139.1                              3037943  6 -   4378816 cc----tctt
i Equus_asinus.JREZ01000139.1                            I 3 C 0
s Equus_caballus.CM000403.2                               21371877  6 +  39960074 cc----tctt
i Equus_caballus.CM000403.2                              I 3 C 0
s Equus_przewalskii.KK951119.1                              408663  6 -    498745 cc----tctt
i Equus_przewalskii.KK951119.1                           I 3 C 0
s Erythrocebus_patas.Contig38                               258973  6 +  21539334 cc----tctt
i Erythrocebus_patas.Contig38                            I 3 C 0
s Eulemur_albifrons.k141_51491                               12083  6 -     24895 cc----tatt
i Eulemur_albifrons.k141_51491                           I 2 C 0
s Eulemur_collaris.k141_601111                               39795  6 -     70999 cc----tatt
i Eulemur_collaris.k141_601111                           I 2 C 0
s Eulemur_coronatus.k141_384460                              83755  6 +    112731 cc----tatt
i Eulemur_coronatus.k141_384460                          I 2 C 0
s Eulemur_flavifrons.k141_433119                             40327  6 +     68309 cc----tatt
i Eulemur_flavifrons.k141_433119                         I 2 C 0
s Eulemur_fulvus.k141_636316                                 50652  6 -     65740 cc----tatt
i Eulemur_fulvus.k141_636316                             I 2 C 0
s Eulemur_macaco.k141_1562045                                21282  6 -     75513 cc----tatt
i Eulemur_macaco.k141_1562045                            I 2 C 0
s Eulemur_mongoz.k141_232305                                 45475  6 -     97555 cc----tatt
i Eulemur_mongoz.k141_232305                             I 2 C 0
s Eulemur_rubriventer.k141_1423786                            2202  6 +     30972 cc----tatt
i Eulemur_rubriventer.k141_1423786                       I 2 C 0
s Eulemur_rufus.k141_514691                                  39925  6 -     52037 cc----tatt
i Eulemur_rufus.k141_514691                              I 2 C 0
s Eulemur_sanfordi.k141_1122526                              56326  6 -    111500 cc----tatt
i Eulemur_sanfordi.k141_1122526                          I 2 C 0
s Galago_moholi.ctg3793                                     119487  6 -    137831 CC----TTGT
i Galago_moholi.ctg3793                                  I 6 C 0
s Galago_senegalensis.k141_991736                             3027  6 +     22493 CC----TTGT
i Galago_senegalensis.k141_991736                        I 6 C 0
s Galagoides_demidoff.k141_561628                            16494  6 +     32986 CC----TTGT
i Galagoides_demidoff.k141_561628                        n 1542 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               3395  6 +      5976 cc----tctt
i Galeopterus_variegatus.GalVar_scaffold_132127          I 3 I 119
s Gorilla_beringei.k141_3358147                               1079  6 -      8343 ct----tctt
i Gorilla_beringei.k141_3358147                          I 3 I 7
s Gorilla_gorilla.LT578341.1                                250579  6 - 186649187 ct----tctt
i Gorilla_gorilla.LT578341.1                             I 46 C 0
s Hapalemur_alaotrensis.k141_330369                          12014  6 -     40692 cc----tatt
i Hapalemur_alaotrensis.k141_330369                      I 2 C 0
s Hapalemur_gilberti.k141_646465                             33416  6 +     49394 cc----tatt
i Hapalemur_gilberti.k141_646465                         I 2 C 0
s Hapalemur_griseus.k141_763500                              58284  6 -     66874 cc----tatt
i Hapalemur_griseus.k141_763500                          I 2 C 0
s Hapalemur_meridionalis.k141_258450                          7161  6 -     42923 cc----tatt
i Hapalemur_meridionalis.k141_258450                     I 2 C 0
s Hapalemur_occidentalis.k141_578367                         14157  6 -     53142 cc----tatt
i Hapalemur_occidentalis.k141_578367                     I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546223  6 -   1711038 tc----tctt
i Hipposideros_armiger.JXIK01000431.1                    I 3 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45536  6 +     49977 TC----TCTT
i Hipposideros_galeritus.HipGal_scaffold_23202           I 7 C 0
s Hoolock_leuconedys.ctg274                                    138475  6 -    630532 cc----tctt
i Hoolock_leuconedys.ctg274                                 I 3 C 0
s Hylobates_agilis.k141_1155965                               1508  6 +     12352 cc----tctt
i Hylobates_agilis.k141_1155965                          I 3 C 0
s Hylobates_klossii.k141_738755                               8691  6 +     55766 cc----tctt
i Hylobates_klossii.k141_738755                          I 3 C 0
s Hylobates_pileatus_b.LG02                                       2048030  6 + 191637585 cc----tctt
i Hylobates_pileatus_b.LG02                                     I 3 C 0
s Hylobates_pileatus_a.tarseq_633                            7797362  6 +  11177569 cc----tctt
i Hylobates_pileatus_a.tarseq_633                          I 3 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375372  6 +   7955117 cc----tctt
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Indri_indri.k141_4600452                                     159  5 -      1527 -c----tatt
i Indri_indri.k141_4600452                               C 0 I 9
s Lagothrix_lagothricha.k141_246028                          39808  6 +    110728 cc----tctt
i Lagothrix_lagothricha.k141_246028                      I 2 C 0
s Lemur_catta.scaffold_24                                 14756806  6 +  30322482 cc----tatt
i Lemur_catta.scaffold_24                                I 2 C 0
s Leontocebus_fuscicollis.k141_2994775                         512  3 -     13097 c-------tc
i Leontocebus_fuscicollis.k141_2994775                   I 9 C 0
s Leontocebus_illigeri.k141_2951200                            463  3 +      5940 c-------tc
i Leontocebus_illigeri.k141_2951200                      I 9 C 0
s Leontocebus_nigricollis.k141_3905062                          94  3 -      5717 c-------tc
i Leontocebus_nigricollis.k141_3905062                   I 9 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6715  6 -     11567 cc----tctc
i Leontopithecus_chrysomelas.k141_1327670                I 2 C 0
s Leontopithecus_rosalia.k141_349454                          8096  6 -     12945 cc----tctc
i Leontopithecus_rosalia.k141_349454                     I 2 C 0
s Lepilemur_ankaranensis.k141_567626                          5451  6 +     29618 cc----tatt
i Lepilemur_ankaranensis.k141_567626                     I 2 C 0
s Lepilemur_dorsalis.k141_387009                              5448  6 +     31569 cc----tatt
i Lepilemur_dorsalis.k141_387009                         I 2 C 0
s Lepilemur_ruficaudatus.k141_330196                          5458  6 +     24756 cc----tatt
i Lepilemur_ruficaudatus.k141_330196                     I 2 C 0
s Lepilemur_septentrionalis.k141_360456                       5453  6 +     16388 cc----tatt
i Lepilemur_septentrionalis.k141_360456                  I 2 C 0
s Lophocebus_aterrimus.ctg367                               329153  6 -   1826925 cc----tctt
i Lophocebus_aterrimus.ctg367                            I 3 C 0
s Loris_lydekkerianus.k141_2031736                            2464  5 +     19643 C-----TTGT
i Loris_lydekkerianus.k141_2031736                       I 6 C 0
s Loris_tardigradus.ctg83                                  5036122  5 -   6120653 c-----ttgt
i Loris_tardigradus.ctg83                                I 6 C 0
s Macaca_arctoides.k141_1757516                              41433  6 -     61512 cc----tctt
i Macaca_arctoides.k141_1757516                          I 3 C 0
s Macaca_assamensis.Contig5                                 369061  6 -  60120075 cc----tctt
i Macaca_assamensis.Contig5                              I 3 C 0
s Macaca_cyclopis.k119_263443                                21381  6 +     30207 cc----tctt
i Macaca_cyclopis.k119_263443                            I 3 C 0
s Macaca_fascicularis.k141_1397292                           18484  6 -     24934 cc----tctt
i Macaca_fascicularis.k141_1397292                       I 3 C 0
s Macaca_fuscata.k119_546792                                 21268  6 +     30527 cc----tctt
i Macaca_fuscata.k119_546792                             I 3 C 0
s Macaca_leonina.k141_321385                                 32457  6 -     50087 cc----tctt
i Macaca_leonina.k141_321385                             I 3 C 0
s Macaca_maura.k141_1103459                                  42195  6 +     51645 cc----tctt
i Macaca_maura.k141_1103459                              I 3 C 0
s Macaca_mulatta.NC_041758.1                                410769  6 - 187317192 cc----tctt
i Macaca_mulatta.NC_041758.1                             I 3 C 0
s Macaca_nemestrina.KQ007038.1                              395652  6 +  25927173 cc----tctt
i Macaca_nemestrina.KQ007038.1                           I 3 C 0
s Macaca_nigra.k141_2818840                                  44784  6 -     62418 cc----tctt
i Macaca_nigra.k141_2818840                              I 3 C 0
s Macaca_radiata.k141_3557992                                21471  6 +     24253 cc----tctt
i Macaca_radiata.k141_3557992                            I 3 C 0
s Macaca_siberu.k141_2185972                                 41228  6 +     59329 cc----tctt
i Macaca_siberu.k141_2185972                             I 3 C 0
s Macaca_silenus.Contig273                                  267060  6 +    668171 cc----tctt
i Macaca_silenus.Contig273                               I 3 C 0
s Macaca_thibetana.k99_41370                                 18406  6 +     21031 cc----tctt
i Macaca_thibetana.k99_41370                             I 3 C 0
s Macaca_tonkeana.k141_1880923                               32138  6 +     33478 cc----tctt
i Macaca_tonkeana.k141_1880923                           I 3 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219376  2 -    270270 --------TT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318536  6 +  24302211 cc----tctt
i Mandrillus_leucophaeus.scaffold280                     I 3 C 0
s Mandrillus_sphinx.Contig270                               353368  6 -    752769 cc----tctt
i Mandrillus_sphinx.Contig270                            I 3 C 0
s Marmota_marmota.CZRN01000018.1                           7489465  6 +  40650429 cc----tctt
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146451 10 +    207569 CCTGACTCTT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mico_argentatus.k141_582562                                 6475  6 +     17804 cc----tctc
i Mico_argentatus.k141_582562                            I 2 C 0
s Mico_humeralifer.k141_1180625                               7248  6 -     12984 CC----TCTC
i Mico_humeralifer.k141_1180625                          I 2 C 0
s Mico_schneideri.k141_1877700                                     15210  6 -     26561 cc----tctc
i Mico_schneideri.k141_1877700                                 I 2 C 0
s Microcebus_murinus.CM007674.1                           74981051  6 +  93316391 cc----tatT
i Microcebus_murinus.CM007674.1                          I 2 C 0
s Miopithecus_ogouensis.k141_1534655                         18526  6 -     27822 cc----tctt
i Miopithecus_ogouensis.k141_1534655                     I 3 C 0
s Mirza_zaza.k141_766280                                     48912  6 -     62432 cc----tatt
i Mirza_zaza.k141_766280                                 I 2 C 0
s Nasalis_larvatus.k141_1350636                              24812  6 +     34575 cc----tctt
i Nasalis_larvatus.k141_1350636                          I 3 C 0
s Nomascus_annamensis.k141_1771965                           49760  6 -    132029 cc----tctt
i Nomascus_annamensis.k141_1771965                       I 3 C 0
s Nomascus_concolor.k141_735679                               5856  6 -     16345 cc----tctt
i Nomascus_concolor.k141_735679                          I 3 C 0
s Nomascus_gabriellae.k141_57920                             11739  6 +     22201 cc----tctt
i Nomascus_gabriellae.k141_57920                         I 3 C 0
s Nomascus_siki_b.tarseq_93                            8410076  6 -  22158432 cc----tctt
i Nomascus_siki_b.tarseq_93                          I 3 C 0
s Nomascus_siki_a.k141_941534                                  22139  6 -     54323 cc----tctt
i Nomascus_siki_a.k141_941534                              I 3 C 0
s Nycticebus_bengalensis.LG01                             93631238  6 + 196305487 TC----TTGT
i Nycticebus_bengalensis.LG01                            I 6 C 0
s Nycticebus_coucang.k141_8166032                              627  6 +      2758 TC----TTGT
i Nycticebus_coucang.k141_8166032                        I 6 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559517  6 - 199412804 TC----TTGT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 6 C 0
s Otolemur_crassicaudatus.k141_85057                         22763  6 -     23432 CC----TTGT
i Otolemur_crassicaudatus.k141_85057                     I 6 C 0
s Otolemur_garnettii.GL873799.1                             347328  6 +   1103335 CC----TTGT
i Otolemur_garnettii.GL873799.1                          I 6 C 0
s Pan_troglodytes.CM009242.2                               1467968  6 - 189151597 ct----tctt
i Pan_troglodytes.CM009242.2                             I 3 C 0
s Papio_anubis.CM001495.2                                   239380  6 - 183742232 cc----tctt
i Papio_anubis.CM001495.2                                I 3 C 0
s Papio_cynocephalus.k141_1507553                             5847  6 +     21308 cc----tctt
i Papio_cynocephalus.k141_1507553                        I 3 C 0
s Papio_hamadryas.Contig39                                  286884  6 -  20919399 cc----tctt
i Papio_hamadryas.Contig39                               I 3 C 0
s Papio_kindae.k141_2214839                                  18500  6 -     27687 cc----tctt
i Papio_kindae.k141_2214839                              I 3 C 0
s Papio_papio.k141_799093                                    11636  6 +     16796 cc----tctt
i Papio_papio.k141_799093                                I 3 C 0
s Papio_ursinus.k141_2278143                                 18446  6 -     23640 cc----tctt
i Papio_ursinus.k141_2278143                             I 3 C 0
s Perodicticus_ibeanus.k141_1921260                          21327  6 +     31479 CC----TTGT
i Perodicticus_ibeanus.k141_1921260                      I 6 C 0
s Perodicticus_potto.k141_1854441                            13698  6 -     24908 CC----TTGT
i Perodicticus_potto.k141_1854441                        I 6 C 0
s Piliocolobus_badius.k141_2495623                            5266  6 +      7560 cc----tctt
i Piliocolobus_badius.k141_2495623                       I 3 C 0
s Piliocolobus_gordonorum.k141_905727                        60973  6 -     63152 cc----tctt
i Piliocolobus_gordonorum.k141_905727                    I 3 C 0
s Piliocolobus_kirkii.k141_579682                            43572  6 +     45295 cc----tctt
i Piliocolobus_kirkii.k141_579682                        I 3 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1251  6 +      5735 cc----tctt
i Piliocolobus_tephrosceles.PDMG02034973.1               I 3 C 0
s Pithecia_albicans.k141_1239476                             61444  6 +    207309 cc----tctt
i Pithecia_albicans.k141_1239476                         I 2 C 0
s Pithecia_chrysocephala.k141_785207                          2564  6 -     25401 cc----tctt
i Pithecia_chrysocephala.k141_785207                     I 2 C 0
s Pithecia_hirsuta.k141_640380                               28279  6 +     58159 cc----tctt
i Pithecia_hirsuta.k141_640380                           I 2 C 0
s Pithecia_mittermeieri.k141_1280039                         28555  6 +     63561 cc----tctt
i Pithecia_mittermeieri.k141_1280039                     I 2 C 0
s Pithecia_pissinattii.k141_878371                           28318  6 +     51148 cc----tctt
i Pithecia_pissinattii.k141_878371                       I 2 C 0
s Pithecia_pithecia.tarseq_165                              553311  6 -   4542175 cc----tctt
i Pithecia_pithecia.tarseq_165                           I 2 C 0
s Pithecia_vanzolinii.k141_1369553                           28302  6 +     51125 cc----tctt
i Pithecia_vanzolinii.k141_1369553                       I 2 C 0
s Plecturocebus_bernhardi.k141_2549090                        4726  6 +     39866 cc----tctt
i Plecturocebus_bernhardi.k141_2549090                   I 2 C 0
s Plecturocebus_caligatus.k141_1382851                       39214  6 -     87950 cc----tctt
i Plecturocebus_caligatus.k141_1382851                   I 2 C 0
s Plecturocebus_cinerascens.k141_1164729                     39607  6 -     88961 cc----tctt
i Plecturocebus_cinerascens.k141_1164729                 I 2 C 0
s Plecturocebus_cupreus.k141_2351393                          4306  6 -     39403 cc----tctt
i Plecturocebus_cupreus.k141_2351393                     I 2 C 0
s Plecturocebus_dubius.k141_1058799                          39260  6 +     87928 cc----tctt
i Plecturocebus_dubius.k141_1058799                      I 2 C 0
s Plecturocebus_grovesi.k141_2013005                          4304  6 -     60166 cc----tcgt
i Plecturocebus_grovesi.k141_2013005                     I 2 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11240  6 -     67232 cc----tctt
i Plecturocebus_hoffmannsi.k141_3303950                  I 2 C 0
s Plecturocebus_miltoni.k141_349282                          39156  6 -     90634 cc----tctt
i Plecturocebus_miltoni.k141_349282                      I 2 C 0
s Plecturocebus_moloch.k141_1031110                          40624  6 +     89403 cc----tctt
i Plecturocebus_moloch.k141_1031110                      I 2 C 0
s Pongo_abelii.CM009266.2                                   173585  6 - 189387572 ct----tctt
i Pongo_abelii.CM009266.2                                I 3 C 0
s Pongo_pygmaeus.ctg66                                      188583  6 -   9816681 ct----tctt
i Pongo_pygmaeus.ctg66                                   I 3 C 0
s Presbytis_comata.k141_1230337                              23750  6 +     69807 cc----tctt
i Presbytis_comata.k141_1230337                          I 3 C 0
s Presbytis_mitrata.k141_584736                              40945  6 -     80239 cc----tctt
i Presbytis_mitrata.k141_584736                          I 3 C 0
s Prolemur_simus.MPIZ01000396.1                            1979964  6 +   4620579 CC----TATT
i Prolemur_simus.MPIZ01000396.1                          I 2 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562538  6 -   2598838 cc----taTT
i Propithecus_coquerelli.NW_012148875.1                  I 2 C 0
s Propithecus_coronatus.k141_209299                            184  6 -      7103 cc----tatt
i Propithecus_coronatus.k141_209299                      I 2 C 0
s Propithecus_diadema.k141_153680                              780  6 -     11706 cc----tatt
i Propithecus_diadema.k141_153680                        I 2 C 0
s Propithecus_edwardsi.k141_635656                            4515  6 -     30655 cc----tatt
i Propithecus_edwardsi.k141_635656                       I 2 C 0
s Propithecus_perrieri.k141_1496898                          30840  6 +     46564 cc----tatt
i Propithecus_perrieri.k141_1496898                      I 2 C 0
s Propithecus_tattersalli.k141_1127767                       91131  6 -     98465 cc----tatt
i Propithecus_tattersalli.k141_1127767                   I 2 C 0
s Propithecus_verreauxi.k141_1047036                          4753  6 +     35169 cc----tatt
i Propithecus_verreauxi.k141_1047036                     I 2 C 0
s Pteropus_alecto.KB030862.1                               5836875  6 -  28871421 cc----tctt
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Pteropus_vampyrus.KN525825.1                             3533450  6 -   4952924 cc----tctt
i Pteropus_vampyrus.KN525825.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                             23137  6 +     91421 cc----tctt
i Pygathrix_cinerea.k141_1153803                         I 3 C 0
s Pygathrix_nigripes_b.ctg100                                  149629  6 -   7812017 cc----tctt
i Pygathrix_nigripes_b.ctg100                               I 3 C 0
s Pygathrix_nigripes_a.k141_215492                              4006  6 +     72585 cc----tctt
i Pygathrix_nigripes_a.k141_215492                         I 3 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909547  6 +   3329780 cc----tctt
i Rhinolophus_sinicus.LVEH01000134.1                     I 7 C 0
s Rhinopithecus_bieti.k119_221883                            24970  6 +     27361 cc----tctt
i Rhinopithecus_bieti.k119_221883                        I 3 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118329  6 + 195417433 cc----tctt
i Rhinopithecus_roxellana.NC_044550.1                    I 3 C 0
s Rhinopithecus_strykeri.ctg102                             232578  6 -   7961872 cc----tctt
i Rhinopithecus_strykeri.ctg102                          I 3 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70920  6 -    116970 cc----tctt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 3 C 0
s Saguinus_bicolor.k141_1429097                                439  6 +     27962 Cc----tctc
i Saguinus_bicolor.k141_1429097                          I 9 C 0
s Saguinus_geoffroyi.k141_3779887                              439  6 +      6077 cc----tctt
i Saguinus_geoffroyi.k141_3779887                        I 9 C 0
s Saguinus_imperator.k141_1898058                              460  2 +      5971 c--------t
i Saguinus_imperator.k141_1898058                        I 9 C 0
s Saguinus_inustus.k141_2469308                                510  5 +      5932 -c----tctc
i Saguinus_inustus.k141_2469308                          I 7 C 0
s Saguinus_labiatus.k141_1571581                               660  5 -      2099 -c----tctc
i Saguinus_labiatus.k141_1571581                         I 7 C 0
s Saguinus_midas.LG03                                       387698  6 - 209938924 Cc----tctc
i Saguinus_midas.LG03                                    I 9 C 0
s Saguinus_mystax.k141_8077960                                 460  5 +      5979 -c----tctc
i Saguinus_mystax.k141_8077960                           I 7 C 0
s Saguinus_oedipus.k141_1466288                                838  6 -      4301 cc----tctt
i Saguinus_oedipus.k141_1466288                          I 9 C 0
s Sapajus_apella.ctg103                                     234888  6 +   5703754 cc----tctt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4478  6 +     21866 cc----tctt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112638  6 +    313613 CC----TTTT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 C 0
s Semnopithecus_entellus.k141_158471                         21460  6 +     27374 cc----tctt
i Semnopithecus_entellus.k141_158471                     I 3 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24977  6 +     58920 cc----tctt
i Semnopithecus_hypoleucos.k141_1910531                  I 3 C 0
s Semnopithecus_johnii.k141_843753                           11472  6 -     45317 cc----tctt
i Semnopithecus_johnii.k141_843753                       I 3 C 0
s Semnopithecus_priam.k141_714795                            19129  6 -     42441 cc----tctt
i Semnopithecus_priam.k141_714795                        I 3 C 0
s Semnopithecus_schistaceus.k141_1432920                     21811  6 -     29113 cc----tctt
i Semnopithecus_schistaceus.k141_1432920                 I 3 C 0
s Semnopithecus_vetulus.k141_244474                          24883  6 -     48123 cc----tctt
i Semnopithecus_vetulus.k141_244474                      I 3 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854609  6 -   1910179 cc----tctt
i Solenodon_paradoxus.SolPar_flattened_line_126          I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1856705  6 +   3870691 cc----tctt
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Symphalangus_syndactylus.tarseq_199                       387057  6 +   1523678 cc----tctt
i Symphalangus_syndactylus.tarseq_199                    I 3 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187705  6 +    199430 cc----tctt
i Tapirus_indicus.TapInd_scaffold_7432                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101660  6 -    539355 cc----tctt
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 C 0
s Tarsius_lariang.k141_1780720                                3849  6 +      6850 CT----TCTT
i Tarsius_lariang.k141_1780720                           I 3 C 0
s Tarsius_wallacei.k141_226975                                3888  6 +     20590 CT----TCTT
i Tarsius_wallacei.k141_226975                           I 3 C 0
s Theropithecus_gelada.CM009954.1                           349365  6 - 186847797 cc----tctt
i Theropithecus_gelada.CM009954.1                        I 3 C 0
s Trachypithecus_auratus.k141_1189070                        17024  6 +     26378 cc----tctt
i Trachypithecus_auratus.k141_1189070                    I 3 C 0
s Trachypithecus_crepusculus.k141_539312                     29705  6 -     78344 cc----tctt
i Trachypithecus_crepusculus.k141_539312                 I 3 C 0
s Trachypithecus_cristatus.k141_180416                       16345  6 +     25722 cc----tctt
i Trachypithecus_cristatus.k141_180416                   I 3 C 0
s Trachypithecus_francoisi.k141_1453105                      24568  6 -     62838 cc----tctt
i Trachypithecus_francoisi.k141_1453105                  I 3 C 0
s Trachypithecus_geei.k141_1001272                           24685  6 +     46913 cc----tctt
i Trachypithecus_geei.k141_1001272                       I 3 C 0
s Trachypithecus_germaini.k141_57262                          5495  6 -     28527 cc----tctt
i Trachypithecus_germaini.k141_57262                     I 3 C 0
s Trachypithecus_hatinhensis.k141_31479                      26507  6 -     64340 cc----tctt
i Trachypithecus_hatinhensis.k141_31479                  I 3 C 0
s Trachypithecus_laotum.k141_928651                          24544  6 -     63452 cc----tctt
i Trachypithecus_laotum.k141_928651                      I 3 C 0
s Trachypithecus_leucocephalus.k141_96450                     5986  6 +     22490 cc----tctt
i Trachypithecus_leucocephalus.k141_96450                I 3 C 0
s Trachypithecus_melamera.k141_324021                         3606  6 +      4141 cc----tctt
i Trachypithecus_melamera.k141_324021                    I 3 C 0
s Trachypithecus_obscurus.k141_848057                         6412  6 -     13050 cc----tctt
i Trachypithecus_obscurus.k141_848057                    I 3 C 0
s Trachypithecus_phayrei.ctg124                             251647  6 -   6242583 cc----tctt
i Trachypithecus_phayrei.ctg124                          I 3 C 0
s Trachypithecus_pileatus.k141_2862967                       57379  6 +     59866 cc----tctt
i Trachypithecus_pileatus.k141_2862967                   I 3 C 0
s Tupaia_chinensis.KB320699.1                              1829346  6 -   4065304 cc----tatc
i Tupaia_chinensis.KB320699.1                            I 3078 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3894  6 -     70247 cC----TATT
i Tupaia_tana.TupTan_flattened_line_394                  I 276 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103865  6 -    105689 CC----TCCT
i Uropsilus_gracilis.UroGra_scaffold_7153                I 3 C 0
s Varecia_rubra.k141_787544                                  21596  6 -     30710 ca----tatt
i Varecia_rubra.k141_787544                              I 2 C 0
s Varecia_variegata.k141_289850                              20504  6 -    147434 ca----tatt
i Varecia_variegata.k141_289850                          I 2 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162860  6 -    224448 CC----TCTT
i Xerus_inauris.XerIna_scaffold_2302                     I 3 C 0
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   16460  0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2105682  0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563             9476  0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178                632  0 +      5315 C
e Zalophus_californianus.ZalCal_flattened_line_17732         25134  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                101249  1 -    112863 I
e Ursus_maritimus.KK499267.1                                177855  1 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              3234  1 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_59017          4804  0 -     10349 C
e Otocyon_megalotis.JAEUCK010005147.1                        35565  1 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1447914  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                194502  1 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11465129  5 -  31847680 I
e Mustela_putorius.JH418006.1                             14343700  1 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         4744  5 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             14661  1 -     74585 I
e Lycaon_pictus.CM007581.1                                41610887  1 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        809734  5 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24906645  1 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45103302  1 -  63665305 I
e Canis_lupus_familiaris.chr16                            41611732  1 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          218607  1 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     5246  1 -     23171 I
e CanFam4.chr16                                           42501616  1 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                   586  0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            212066 22 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20411179  1 +  29979442 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    475774  0 -    610378 C
e Tamandua_tetradactyla.TamTet_scaffold_445853                1116  0 -      2009 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             121204  1 +    196729 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18095542  1 +  38429054 I
e Pteronotus_parnellii.KE847780.1                            47967  0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pipistrellus_pipistrellus.PipPip_scaffold_20257            46100  0 +     46691 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11582  1 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3968696 21 +   8748460 I
e Panthera_pardus.KV860321.1                              18457990  1 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   20664  1 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   123103  0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116247  0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_185951                        2210  0 +      3929 C
e Myotis_lucifugus.GL429869.1                               378490  0 +   4330536 C
e Myotis_davidii.KB100139.1                                4378671  0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9788259  0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          33826  0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   14610  1 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 174896  0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                180721  0 +    200668 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Manis_pentadactyla.KN006162.1                             217464  8 +    317179 I
e Manis_javanica.JSZB01003497.1                             670170  8 -    737560 I
e Loxodonta_africana.GL010049.1                           39076483 861 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  65520  1 +     83186 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                26841  1 -    327341 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 24076  1 -     30238 I
e Felis_catus_fca126.CM031415.1                          185112728  1 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12573907  0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129               525  1 +     87169 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      172745  0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           809288  1 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        731 7 +     36723 CC-ACTTT
s Acinonyx_jubatus.LLWD01001279.1                           809289 6 +   1699592 TC-GTGT-
i Acinonyx_jubatus.LLWD01001279.1                        I 1 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411180 7 +  29979442 ttcggTT-
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 I 1
s Ailurus_fulgens.LNAC01001112.1                            212088 7 +    347723 tttgaca-
i Ailurus_fulgens.LNAC01001112.1                         I 22 I 1
s Allenopithecus_nigroviridis.k141_3755588                   44043 7 +     53615 cc-acttt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39858 7 +     44087 cc-acttt
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68769 7 -     84148 cc-acttt
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40992 7 -     78289 cc-acttt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40440 7 +     55831 cc-acttt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38881 7 -     64179 cc-acttt
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20524 7 -     24835 cc-acttt
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37507 7 +     45454 cc-acttt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43206 7 +     70886 cc-acttt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5333 7 +     30854 cc-acttt
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29472 7 +     42133 cc-acttt
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172745 5 -    412891 -C-AGTT-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Aotus_azarae.k141_118258                                   47281 7 -     65372 cc-acttt
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41027 7 +     43593 cc-acttt
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669039 7 +   5030052 CC-ACTTT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20681 7 -     23494 cc-acttt
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5817 7 +      8415 cc-acttt
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      11993 7 -     32367 CC-AGTTT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       15912 7 -     45910 CC-AGATA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   586 5 -     15198 -C-GGTT-
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 1
s Ateles_geoffroyi_b.tarseq_1536                               271267 7 +  21539123 cc-acttt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7438 7 +     48076 cc-acttt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2572 7 -     28759 cc-acttt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30124 7 +     44353 cc-acttt
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45499 7 -     71267 cc-acttt
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19555 7 -     33135 cc-acttt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2675 7 +     11645 cc-agtgg
i Avahi_laniger.k141_2756659                             C 0 I 2
s Avahi_peyrierasi.k141_1823318                               2677 7 -     19611 cc-agtgg
i Avahi_peyrierasi.k141_1823318                          C 0 I 2
s Cacajao_ayresi.k141_96119                                   4459 7 +     28062 cc-acttt
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39753 7 -     91139 cc-acttt
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17279 7 +     95584 cc-acttt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17192 7 +    119600 cc-acttt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6697 7 +     18648 cc-acttc
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6373 7 -     13885 cc-acttc
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15059 7 +     17162 cc-acttc
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450015 7 + 189096842 CC-ACTTC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16308 7 -     18408 cc-acttc
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42501617 7 +  60362399 TTTGGTT-
i CanFam4.chr16                                          I 1 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5247 7 -     23171 TTTGGTT-
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 1 I 1
s Canis_lupus_dingo.QKWQ01000480.1                          218608 7 +   9314153 tttggtt-
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 I 1
s Canis_lupus_familiaris.chr16                            41611733 7 +  59632846 tttggtt-
i Canis_lupus_familiaris.chr16                           I 1 I 1
s Canis_lupus_orion.HG994398.1                            45103303 7 -  63665305 tttggtt-
i Canis_lupus_orion.HG994398.1                           I 1 I 1
s Carlito_syrichta.NW_007259797.1                           267166 3 +    496798 TC-A----
i Carlito_syrichta.NW_007259797.1                        I 58 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                632 5 +      5315 -C-AGTT-
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 1
s Cebuella_niveiventris.k141_592277                           1593 7 -     12580 cc-acttc
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39479 7 +     53515 cc-acttc
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367671 7 -  26074798 cc-gcttt
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4560 7 -     34880 cc-gcttt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63655 7 -     89041 cc-gcttt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            331 3 -      1636 tc-a----
i Cephalopachus_bancanus.k141_72622                      I 58 C 0
s Ceratotherium_simum.JH767749.1                          15488691 6 -  27778364 ct-agtt-
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15524 6 +     27315 ct-agtt-
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 1
s Cercocebus_atys.KQ010504.1                                137203 7 -   4669795 cc-acttt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40944 7 +     47900 cc-acttt
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40776 7 -     44860 cc-acttt
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40758 7 -    148725 cc-acttt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23817 7 -     40656 cc-acttt
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3752 7 +     20796 cc-acttt
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8007 7 -     17524 cc-acttt
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23696 7 -     34525 cc-acttt
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8407 7 -     25376 cc-acttt
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360972 7 -  39242232 cc-acttt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266718 7 +  21565898 cc-acttt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28170 7 -     45857 cc-acttt
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23961 7 -     32606 cc-acttt
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          150 7 +      8499 cc-acttt
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21660 7 +     70610 cc-acttt
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18525 7 +     36323 cc-acttt
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             27093 7 -     33796 cc-agctg
i Cheirogaleus_major.k141_666340                         C 0 I 2
s Cheirogaleus_medius.k141_759766                             1288 7 -     15404 cc-agctg
i Cheirogaleus_medius.k141_759766                        C 0 I 2
s Cheracebus_lucifer.k141_2312002                             5557 7 -     32913 cc-acttt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15970 7 -     40346 cc-acttt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16234 7 +    216457 cc-acttt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16013 7 +     39636 cc-acttt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            447 7 +      5346 cc-acatt
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39100 7 -    112038 cc-acttt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4672 7 +     34062 cc-acttt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339421 7 +  18827391 cc-acttt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6032 7 -     44032 cc-acttt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300747 7 - 135778131 cc-acttt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405280 7 -   2368649 cc-acttt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374439 7 - 200372422 cc-acttt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5164 7 -      6605 cc-acttt
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803591 6 +  53390261 CC-AGTT-
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          8997 6 +     10921 cc-agtt-
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129               526 6 +     87169 TT-GGGT-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 I 1
s Daubentonia_madagascariensis.ctg71                        289122 7 +  12879189 cc-agttg
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660978 6 -   1390856 ct-agtt-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                  135767 6 -    198055 ct-agtt-
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Eidolon_helvum.AWHC01266696.1                               2323 6 +     19438 cc-agtt-
i Eidolon_helvum.AWHC01266696.1                          C 0 I 1
s Enhydra_lutris.KZ291758.1                               24906646 7 +  41312741 tttgatt-
i Enhydra_lutris.KZ291758.1                              I 1 I 141
s Eptesicus_fuscus.JH977646.1                             12573907 5 +  14770903 -c-agtt-
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              3037949 6 -   4378816 cc-agtt-
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               21371883 6 +  39960074 cc-agtt-
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                              408669 6 -    498745 cc-agtt-
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erythrocebus_patas.Contig38                               258979 7 +  21539334 cc-acttt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12089 7 -     24895 cc-agttg
i Eulemur_albifrons.k141_51491                           C 0 I 2
s Eulemur_collaris.k141_601111                               39801 7 -     70999 cc-agttg
i Eulemur_collaris.k141_601111                           C 0 I 2
s Eulemur_coronatus.k141_384460                              83761 7 +    112731 cc-agttg
i Eulemur_coronatus.k141_384460                          C 0 I 2
s Eulemur_flavifrons.k141_433119                             40333 7 +     68309 cc-agttg
i Eulemur_flavifrons.k141_433119                         C 0 I 2
s Eulemur_fulvus.k141_636316                                 50658 7 -     65740 cc-agttg
i Eulemur_fulvus.k141_636316                             C 0 I 2
s Eulemur_macaco.k141_1562045                                21288 7 -     75513 cc-agttg
i Eulemur_macaco.k141_1562045                            C 0 I 2
s Eulemur_mongoz.k141_232305                                 45481 7 -     97555 cc-agttg
i Eulemur_mongoz.k141_232305                             C 0 I 2
s Eulemur_rubriventer.k141_1423786                            2208 7 +     30972 cc-agttg
i Eulemur_rubriventer.k141_1423786                       C 0 I 2
s Eulemur_rufus.k141_514691                                  39931 7 -     52037 cc-agttg
i Eulemur_rufus.k141_514691                              C 0 I 2
s Eulemur_sanfordi.k141_1122526                              56332 7 -    111500 cc-agttg
i Eulemur_sanfordi.k141_1122526                          C 0 I 2
s Felis_catus.CM001381.2                                 186242947 6 - 206538554 TC-GTGT-
i Felis_catus.CM001381.2                                 I 1 I 1
s Felis_catus_fca126.CM031415.1                          185112729 6 - 205367284 TC-GTGT-
i Felis_catus_fca126.CM031415.1                          I 1 I 1
s Felis_nigripes.FelNig_flattened_line_31944                 24077 6 -     30238 TC-GTGT-
i Felis_nigripes.FelNig_flattened_line_31944             I 1 I 1
s Galago_moholi.ctg3793                                     119493 7 -    137831 CC-AGATG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3033 7 +     22493 CC-AGATG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16500 7 +     32986 CC-AGATG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15301 7 +     18121 cc-agttt
i Galeopterus_variegatus.GalVar_scaffold_74466           I 52 C 0
s Gorilla_beringei.k141_3358224                               1091 7 -      1229 CC-ACTTT
i Gorilla_beringei.k141_3358224                          I 52 n 7
s Gorilla_gorilla.LT578341.1                                250585 7 - 186649187 cc-acttt
i Gorilla_gorilla.LT578341.1                             C 0 I 21
s Hapalemur_alaotrensis.k141_330369                          12020 7 -     40692 cc-agttg
i Hapalemur_alaotrensis.k141_330369                      C 0 I 2
s Hapalemur_gilberti.k141_646465                             33422 7 +     49394 cc-agttg
i Hapalemur_gilberti.k141_646465                         C 0 I 2
s Hapalemur_griseus.k141_763500                              58290 7 -     66874 cc-agttg
i Hapalemur_griseus.k141_763500                          C 0 I 2
s Hapalemur_meridionalis.k141_258450                          7167 7 -     42923 cc-agttg
i Hapalemur_meridionalis.k141_258450                     C 0 I 2
s Hapalemur_occidentalis.k141_578367                         14163 7 -     53142 cc-agttg
i Hapalemur_occidentalis.k141_578367                     C 0 I 2
s Helogale_parvula.HelPar_flattened_line_2585                26842 6 -    327341 CT-GGAT-
i Helogale_parvula.HelPar_flattened_line_2585            I 1 I 1
s Hipposideros_armiger.JXIK01000431.1                      1546229 6 -   1711038 cc-agtt-
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_23202               45542 6 +     49977 CC-AGTT-
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 1
s Hoolock_leuconedys.ctg274                                    138481 7 -    630532 cc-acttt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65521 5 +     83186 TA--TTT-
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1 I 1
s Hylobates_agilis.k141_1155965                               1514 7 +     12352 cc-acttt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8697 7 +     55766 cc-acttt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048036 7 + 191637585 cc-acttt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797368 7 +  11177569 cc-acttt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375378 7 +   7955117 cc-agttt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_1634743                                     433 7 -      1784 cc-agtgg
i Indri_indri.k141_1634743                               I 155 I 268
s Lagothrix_lagothricha.k141_246028                          39814 7 +    110728 cc-acttt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14756812 7 +  30322482 cc-agttg
i Lemur_catta.scaffold_24                                C 0 I 2
s Leontocebus_fuscicollis.k141_2994775                         515 7 -     13097 cc-acatt
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            466 7 +      5940 cc-acatt
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                          97 7 -      5717 cc-acatt
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6721 7 -     11567 cc-acttc
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8102 7 -     12945 cc-acttc
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5457 7 +     29618 cc-ggttg
i Lepilemur_ankaranensis.k141_567626                     C 0 I 2
s Lepilemur_dorsalis.k141_387009                              5454 7 +     31569 cc-agttg
i Lepilemur_dorsalis.k141_387009                         C 0 I 2
s Lepilemur_ruficaudatus.k141_330196                          5464 7 +     24756 cc-ggttg
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 2
s Lepilemur_septentrionalis.k141_360456                       5459 7 +     16388 cc-ggttg
i Lepilemur_septentrionalis.k141_360456                  C 0 I 2
s Leptonychotes_weddellii.KB714746.1                        809739 7 -   3914936 ttcagtt-
i Leptonychotes_weddellii.KB714746.1                     I 5 I 1
s Lophocebus_aterrimus.ctg367                               329159 7 -   1826925 cc-acttt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2469 7 +     19643 CC-AGAAG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036127 7 -   6120653 cc-agaag
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41610888 7 +  59628241 tttggtt-
i Lycaon_pictus.CM007581.1                               I 1 I 1
s Macaca_arctoides.k141_1757516                              41439 7 -     61512 cc-acttt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369067 7 -  60120075 cc-acttt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21387 7 +     30207 cc-acttt
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18490 7 -     24934 cc-acttt
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21274 7 +     30527 cc-acttt
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32463 7 -     50087 cc-acttt
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42201 7 +     51645 cc-acttt
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410775 7 - 187317192 cc-acttt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395658 7 +  25927173 cc-acttt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44790 7 -     62418 cc-acttt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21477 7 +     24253 cc-acttt
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41234 7 +     59329 cc-acttt
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267066 7 +    668171 cc-acttt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18412 7 +     21031 cc-acttt
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32144 7 +     33478 cc-acttt
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219378 6 -    270270 CT-GGTT-
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                        318542 7 +  24302211 cc-acttt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353374 7 -    752769 cc-acttt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670178 6 -    737560 cC-AGTT-
i Manis_javanica.JSZB01003497.1                          I 8 I 1
s Manis_pentadactyla.KN006162.1                             217472 6 +    317179 cC-AGTT-
i Manis_pentadactyla.KN006162.1                          I 8 I 1
s Marmota_marmota.CZRN01000018.1                           7489471 7 +  40650429 cc-agttt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146461 6 +    207569 CT-AGTT-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_19308             14662 7 -     74585 TTTGATT-
i Mellivora_capensis.MelCap_flattened_line_19308         I 1 I 141
s Mico_argentatus.k141_582562                                 6481 7 +     17804 cc-acttc
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7254 7 -     12984 CC-ACGTC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15216 7 -     26561 cc-acttc
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981057 7 +  93316391 CC-AGTTG
i Microcebus_murinus.CM007674.1                          C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_2233                180721 5 +    200668 -T-GGTT-
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 1
s Miopithecus_ogouensis.k141_1534655                         18532 7 -     27822 cc-acttt
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4749 7 +     27589 TTCAGTT-
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 5 I 1
s Mirza_zaza.k141_766280                                     48918 7 -     62432 cc-agttg
i Mirza_zaza.k141_766280                                 C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174896 5 +    366855 -C-AGTT-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_18455                   14611 6 -     63510 CT-GGAT-
i Mungos_mungo.MunMun_flattened_line_18455               I 1 I 1
s Murina_feae.MurFea_scaffold_17764                          33826 5 +     47283 -C-AGTT-
i Murina_feae.MurFea_scaffold_17764                      C 0 I 1
s Mustela_putorius.JH418006.1                             14343701 7 +  14710649 tttgatt-
i Mustela_putorius.JH418006.1                            I 1 I 139
s Myotis_brandtii.KE162005.1                               9788259 5 +  10118263 -C-AGTT-
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                4378671 5 +   6019432 -c-agtt-
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                               378490 5 +   4330536 -C-AGTT-
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_185951                        2210 5 +      3929 -C-AGTT-
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 I 1
s Nasalis_larvatus.k141_1350636                              24818 7 +     34575 cc-acttt
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465134 7 -  31847680 ttcagtt-
i Neomonachus_schauinslandi.NINY01007730.1               I 5 I 1
s Noctilio_leporinus.NocLep_scaffold_7894                   123103 5 -    149072 -T-AGTT-
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 1
s Nomascus_annamensis.k141_1771965                           49766 7 -    132029 cc-acttt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5862 7 -     16345 cc-acttt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11745 7 +     22201 cc-acttt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410082 7 -  22158432 cc-acttt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22145 7 -     54323 cc-acttt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194503 7 +   9404916 tttggtt-
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 I 1
s Nycticebus_bengalensis.LG01                             93631244 7 + 196305487 CC-AGATG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              633 7 +      2758 CC-AGATG
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559523 7 - 199412804 CC-AGATG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447914 7 +   2017862 ttcagtt-
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                        35566 7 +    559221 CTTGGTT-
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 I 1
s Otolemur_crassicaudatus.k141_85057                         22769 6 -     23432 CC--GATG
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347334 7 +   1103335 CC-AGATG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1467974 7 - 189151597 ct-actTT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20665 6 -    230217 TC-GTGT-
i Panthera_onca.PanOnc_flattened_line_3271               I 1 I 1
s Panthera_pardus.KV860321.1                              18457991 6 -  18783137 TC-GTGT-
i Panthera_pardus.KV860321.1                             I 1 I 1
s Panthera_tigris.KE722367.1                               3968717 6 +   8748460 TC-GTGT-
i Panthera_tigris.KE722367.1                             I 21 I 1
s Papio_anubis.CM001495.2                                   239386 7 - 183742232 cc-acttt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5853 7 +     21308 cc-acttt
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286890 7 -  20919399 cc-acttt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18506 7 -     27687 cc-acttt
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11642 7 +     16796 cc-acttt
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18452 7 -     23640 cc-acttt
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11583 6 +     78924 TC-GGGT-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 I 1
s Perodicticus_ibeanus.k141_1921260                          21333 7 +     31479 CC-AGATG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13704 7 -     24908 CC-AGATG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5272 7 +      7560 cc-acttt
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60979 7 -     63152 cc-acttt
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43578 7 +     45295 cc-acttt
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1257 7 +      5735 cc-acttT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46100 5 +     46691 -c-agtt-
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 I 1
s Pithecia_albicans.k141_1239476                             61450 7 +    207309 cc-acttt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2570 7 -     25401 cc-acttt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28285 7 +     58159 cc-acttt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28561 7 +     63561 cc-acttt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28324 7 +     51148 cc-acttt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553317 7 -   4542175 cc-acttt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28308 7 +     51125 cc-acttt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4732 7 +     39866 cc-acttt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39220 7 -     87950 cc-acttt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39613 7 -     88961 cc-acttt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4312 7 -     39403 cc-acttt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39266 7 +     87928 cc-acttt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4310 7 -     60166 cc-acttt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11246 7 -     67232 cc-acttt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39162 7 -     90634 cc-acttt
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40630 7 +     89403 cc-acttt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173591 7 - 189387572 cc-actTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188589 7 -   9816681 cc-acttt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23756 7 +     69807 cc-acttt
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40951 7 -     80239 cc-acttt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979970 7 +   4620579 CC-AGTTG
i Prolemur_simus.MPIZ01000396.1                          C 0 I 2
s Propithecus_coquerelli.NW_012148875.1                    1562544 7 -   2598838 CC-AGTGG
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 2
s Propithecus_coronatus.k141_209299                            190 7 -      7103 cc-agtgg
i Propithecus_coronatus.k141_209299                      C 0 I 2
s Propithecus_diadema.k141_153680                              786 7 -     11706 cc-agtgg
i Propithecus_diadema.k141_153680                        C 0 I 2
s Propithecus_edwardsi.k141_635656                            4521 7 -     30655 cc-agtgg
i Propithecus_edwardsi.k141_635656                       C 0 I 2
s Propithecus_perrieri.k141_1496898                          30846 7 +     46564 cc-agtgg
i Propithecus_perrieri.k141_1496898                      C 0 I 2
s Propithecus_tattersalli.k141_1127767                       91137 7 -     98465 cc-agtgg
i Propithecus_tattersalli.k141_1127767                   C 0 I 2
s Propithecus_verreauxi.k141_1047036                          4759 7 +     35169 cc-agtgg
i Propithecus_verreauxi.k141_1047036                     C 0 I 2
s Pteronotus_parnellii.KE847780.1                            47967 5 -     66298 -c-agtt-
i Pteronotus_parnellii.KE847780.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4804 6 -     10349 -TTGATT-
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 I 141
s Pteropus_alecto.KB030862.1                               5836881 6 -  28871421 cc-agtt-
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN525825.1                             3533456 6 -   4952924 cc-agtt-
i Pteropus_vampyrus.KN525825.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            18095543 6 +  38429054 tt-gtgt-
i Puma_concolor.QAVW01001104.1                           I 1 I 1
s Pygathrix_cinerea.k141_1153803                             23143 7 +     91421 cc-acttt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  149635 7 -   7812017 cc-acttt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4012 7 +     72585 cc-acttt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909553 6 +   3329780 cc-agtt-
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 1
s Rhinopithecus_bieti.k119_221883                            24976 7 +     27361 cc-atttt
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118335 7 + 195417433 cc-atttt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232584 7 -   7961872 cc-atttt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70926 6 -    116970 tc-agtt-
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 1
s Saguinus_bicolor.k141_1429097                                445 7 +     27962 cc-acatt
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              445 7 +      6077 cc-acatt
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              462 7 +      5971 cc-ccatt
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                515 7 +      5932 cc-acatt
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               665 7 -      2099 cc-acatt
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387704 7 - 209938924 cc-acatt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 465 7 +      5979 cc-acatt
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                                844 7 -      4301 cc-acatt
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     234894 7 +   5703754 cc-gcttt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4484 7 +     21866 cc-gcttt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112644 6 +    313613 CC-AGTT-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21466 7 +     27374 cc-acttt
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24983 7 +     58920 cc-acttt
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11478 7 -     45317 cc-acttt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19135 7 -     42441 cc-acttt
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21817 7 -     29113 cc-acttt
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24889 7 -     48123 cc-acttt
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854615 7 -   1910179 cc-agttt
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1856711 7 +   3870691 cc-agttt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3235 7 -     97271 TTTGGTT-
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 I 1
s Suricata_suricatta.SurSur_flattened_line_6629             121205 6 +    196729 CT-GGAT-
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 I 1
s Symphalangus_syndactylus.tarseq_199                       387063 7 +   1523678 cc-acttt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187711 6 +    199430 cc-agtt-
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    101666 6 -    539355 cc-agtt-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_1780720                                3855 3 +      6850 TC-A----
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                3894 3 +     20590 TC-A----
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349371 7 - 186847797 cc-acttT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475774 5 -    610378 -c-agtt-
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_1189070                        17030 7 +     26378 cc-acttt
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29711 7 -     78344 cc-acttt
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16351 7 +     25722 cc-acttt
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24574 7 -     62838 cc-acttt
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24691 7 +     46913 cc-acttt
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5501 7 -     28527 cc-acttt
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26513 7 -     64340 cc-acttt
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24550 7 -     63452 cc-acttt
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5992 7 +     22490 cc-acttt
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3612 7 +      4141 cc-acttt
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6418 7 -     13050 cc-acttt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251653 7 -   6242583 cc-acttt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57385 7 +     59866 cc-acttt
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1829352 7 -   4065304 CT-AGTTT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3900 7 -     70247 CT-AGTTT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103871 6 -    105689 CG-AGTT-
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                177856 7 +   5085361 ttcagtt-
i Ursus_maritimus.KK499267.1                             I 1 I 1
s Varecia_rubra.k141_787544                                  21602 7 -     30710 cc-agttg
i Varecia_rubra.k141_787544                              C 0 I 2
s Varecia_variegata.k141_289850                              20510 7 -    147434 cc-agttg
i Varecia_variegata.k141_289850                          C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_12041                101250 7 -    112863 TTTGGTT-
i Vulpes_lagopus.VulLag_flattened_line_12041             I 1 I 1
s Xerus_inauris.XerIna_scaffold_2302                        162866 7 -    224448 TC-AGTTT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25134 7 -     86975 TTCAGTT-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
e Allochrocebus_solatus.k141_3554717                         14582 0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904 0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   16460 0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2105682 0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563             9476 0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tamandua_tetradactyla.TamTet_scaffold_445853                1116 0 -      2009 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116247 0 +    130748 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39076483 861 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        738 21 +     36723 TTGT-T-----------AGTTTC--GATAT------TGG---------TT
s Acinonyx_jubatus.LLWD01001279.1                           809296 20 +   1699592 TTTT-T-----------AGCTGT--AATAT------TTG---------A-
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411188 20 +  29979442 CTGT-T-----------AGCTGT--GATAT------TTG---------T-
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                            212096  1 +    347723 a-------------------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         I 1 I 1282
s Allenopithecus_nigroviridis.k141_3755588                   44050  7 +     53615 ttgt-t-----------ag-------------------------------
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39865  7 +     44087 ttgt-t-----------ag-------------------------------
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68776 21 -     84148 ttgt-t-----------agttgc--agtac------tgg---------tt
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               40999 21 -     78289 ttgt-t-----------agttgc--agtac------tgg---------tt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40447 21 +     55831 ttgt-t-----------agttgc--agtac------tgg---------tt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38888 21 -     64179 ttgt-t-----------agttgc--agtac------tgg---------tt
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20531 21 -     24835 ttgt-t-----------agttgc--agtac------tgg---------tt
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37514 21 +     45454 ttgt-t-----------agttgc--agtac------tgg---------tt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43213 21 +     70886 ttgt-t-----------agttgc--agtac------tgg---------tt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5340 21 +     30854 ttgt-t-----------agttgc--agtac------tgg---------tt
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29479 21 +     42133 ttgt-t-----------agttgc--agtac------tgg---------tt
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172751 21 -    412891 TTGT-T-----------AGCTGT--GATAT------TTG---------TG
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Aotus_azarae.k141_118258                                   47288 21 -     65372 ttgt-t-----------agttgc--agtac------tgg---------tt
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41034 21 +     43593 ttgt-t-----------agttgc--agtac------tgg---------tt
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669046 21 +   5030052 TTGT-T-----------AGTTGC--AGTAC------TGG---------TT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20688 21 -     23494 ttgt-t-----------agttgc--agtac------tgg---------tt
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5824 21 +      8415 ttgt-t-----------agttgc--agtac------tgg---------tt
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      12000 21 -     32367 TCGT-T-----------TGTGAT--CATAT------TTA---------CT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       15919 19 -     45910 CTGT-C-----------AGCTGT--AGTTT------GGC-----------
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   592 21 -     15198 TTGT-G-----------AGCTGT--AATAT------TTG---------TA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 1 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271274 21 +  21539123 ttgt-t-----------agttgc--aatac------tgg---------tt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7445 21 +     48076 ttgt-t-----------agttgc--agtac------tgg---------tt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2579 21 -     28759 ttgt-t-----------agttgc--agtac------tgg---------tt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30131 21 +     44353 ttgt-t-----------agttgc--aatac------tgg---------tt
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45506 21 -     71267 ttgt-t-----------agttgc--agtac------tgg---------tt
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19562 21 -     33135 ttgt-t-----------agttgc--agtac------tgg---------tt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2684 16 +     11645 -----------------agctgc--aatat------tgc---------tt
i Avahi_laniger.k141_2756659                             I 2 C 0
s Avahi_peyrierasi.k141_1823318                               2686 16 -     19611 -----------------agctgc--aatat------tgc---------tt
i Avahi_peyrierasi.k141_1823318                          I 2 C 0
s Cacajao_ayresi.k141_96119                                   4466 21 +     28062 ttgt-t-----------agttgc--gatac------tgg---------tt
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39760 21 -     91139 ttgt-t-----------agttgc--gatac------tgg---------tt
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17286 21 +     95584 ttgt-t-----------agttgc--gatac------tgg---------tt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17199 21 +    119600 ttgt-t-----------agttgc--gatac------tgg---------tt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6704 21 +     18648 ctgt-t-----------agctgc--agtcc------tgg---------tt
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6380 21 -     13885 ttgt-t-----------agctga--agtac------tgg---------ct
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15066 21 +     17162 ttgt-t-----------agctgc--agtcc------tgg---------tt
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450022 21 + 189096842 TTGT-T-----------AGCTGC--AGTCC------TGG---------TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16315 21 -     18408 ttgt-t-----------agctgc--agtcc------tgg---------tt
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42501625 20 +  60362399 TTGT-T-----------AGCTGT--AATAT------TTG---------T-
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5255 20 -     23171 TTGT-T-----------AGCTGT--AATAT------TTG---------T-
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218616 20 +   9314153 ttgt-t-----------agCTGT--AATAT------TTG---------T-
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            41611741 20 +  59632846 ttgt-t-----------agCTGT--AATAT------TTG---------T-
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            45103311 20 -  63665305 ttgt-t-----------agCTGT--AATAT------TTG---------T-
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                638 21 +      5315 TTGT-G-----------AGCCGT--AATAT------TTG---------CA
i Carollia_perspicillata.CarPer_scaffold_170178          I 1 C 0
s Cebuella_niveiventris.k141_592277                           1600 21 -     12580 ctgt-t-----------agctgc--agtcc------tgg---------tt
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39486 21 +     53515 ctgt-t-----------agctgc--agtcc------tgg---------tt
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367678 21 -  26074798 ctgt-c-----------agttgc--agtac------tgg---------tt
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4567 21 -     34880 ctgt-c-----------agttgc--agtac------tgg---------tt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63662 21 -     89041 ctgt-c-----------agttgc--agtac------tgg---------tt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488698 21 -  27778364 ttgt-t-----------agctgt--gatat------ttg---------ta
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15531 21 +     27315 ttgt-t-----------agctgt--gatat------ttg---------ta
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 1 C 0
s Cercocebus_atys.KQ010504.1                                137210  7 -   4669795 ttGT-T-----------AG-------------------------------
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40951  7 +     47900 ttgt-t-----------ag-------------------------------
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40783  7 -     44860 ttgt-t-----------ag-------------------------------
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40765  7 -    148725 ttgt-t-----------ag-------------------------------
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23824  7 -     40656 ttgt-t-----------ag-------------------------------
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3759  7 +     20796 ttgt-t-----------ag-------------------------------
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8014  7 -     17524 ttgt-t-----------ag-------------------------------
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23703  7 -     34525 ttgt-t-----------ag-------------------------------
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8414  7 -     25376 ttgt-t-----------ag-------------------------------
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360979  7 -  39242232 ttgt-t-----------ag-------------------------------
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266725  7 +  21565898 ttgt-t-----------ag-------------------------------
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28177  7 -     45857 ttgt-t-----------ag-------------------------------
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23968  7 -     32606 ttgt-t-----------ag-------------------------------
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          157  4 +      8499 ttgt----------------------------------------------
i Cercopithecus_petaurista.k141_42573                    C 0 I 1
s Cercopithecus_pogonias.k141_6079                           21667  7 +     70610 ttgt-t-----------ag-------------------------------
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18532  7 +     36323 ttgt-t-----------ag-------------------------------
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9476 15 -     19938 ------------------ATTAT--ATTCT------TTA---------TA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             27102 16 -     33796 -----------------agctgt--aatgt------tgc---------tt
i Cheirogaleus_major.k141_666340                         I 2 C 0
s Cheirogaleus_medius.k141_759766                             1297 16 -     15404 -----------------agctgt--aatat------tgc---------tt
i Cheirogaleus_medius.k141_759766                        I 2 C 0
s Cheracebus_lucifer.k141_2312002                             5564 21 -     32913 ttgt-t-----------agttgc--agtac------tgg---------tt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15977 21 -     40346 ttgt-t-----------agttgc--agtac------tgg---------tt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16241 21 +    216457 ttgt-t-----------agttgc--agtac------tgg---------tt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16020 21 +     39636 ttgt-t-----------agttgc--agtac------tgg---------tt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            454 21 +      5346 ctgt-t-----------agctgc--agtac------tgg---------tt
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39107 21 -    112038 ttgt-t-----------agttgc--gatac------tgg---------tt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4679 21 +     34062 ttgt-t-----------agttgc--gatac------tgg---------tt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339428  7 +  18827391 ttgt-t-----------ag-------------------------------
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6039  7 -     44032 ttgt-t-----------ag-------------------------------
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300754  7 - 135778131 ttGT-T-----------AG-------------------------------
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405287 21 -   2368649 ttGT-T-----------AGTTTT--GATAC------TGG---------TT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374446 21 - 200372422 ttgt-t-----------agtttt--gatac------tgg---------tt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5171 21 -      6605 ttgt-t-----------agtttt--gatac------tgg---------tt
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803597 30 +  53390261 TTAT-T-----------AGCTGT--AATAT------TTACAGTATTTATT
i Condylura_cristata.JH655891.1                          C 0 I 8
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9004 21 +     10921 ttgt-t-----------agctgt--aatat------ttg---------ta
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               533 20 +     87169 TTTT-T-----------AGCTGT--AATAT------TTG---------A-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Dasypus_novemcinctus.JH564415.1                          2105682 15 -   2246927 ------------------GTTAT--ACTCT------TTA---------TA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289129 21 +  12879189 ttgc-t-----------ggctgt--aatat------tgg---------tt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  660985 21 -   1390856 ttgt-t-----------ggctgt--ggtat------ttg---------ta
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135774 21 -    198055 ttgt-t-----------agctgt--gatat------ttg---------ta
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Eidolon_helvum.AWHC01266696.1                               2330 21 +     19438 ttgt-t-----------agctgt--gatat------ttg---------ta
i Eidolon_helvum.AWHC01266696.1                          I 1 C 0
s Enhydra_lutris.KZ291758.1                               24906794  1 +  41312741 t-------------------------------------------------
i Enhydra_lutris.KZ291758.1                              I 141 I 171
s Eptesicus_fuscus.JH977646.1                             12573913 21 +  14770903 ttaa-t-----------agctgt--aatat------ttg---------ta
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              3037956 20 -   4378816 ttgt-t-----------agctgt--g-tat------ttg---------tc
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               21371890 20 +  39960074 atgt-t-----------agctgt--g-tat------ttg---------tc
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                              408676 20 -    498745 atgt-t-----------agctgt--g-tat------ttg---------tc
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erythrocebus_patas.Contig38                               258986  7 +  21539334 ttgt-t-----------ag-------------------------------
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12098 16 -     24895 -----------------agctgt--aatat------tgc---------tt
i Eulemur_albifrons.k141_51491                           I 2 C 0
s Eulemur_collaris.k141_601111                               39810 16 -     70999 -----------------agctgt--aatat------tgc---------tt
i Eulemur_collaris.k141_601111                           I 2 C 0
s Eulemur_coronatus.k141_384460                              83770 16 +    112731 -----------------agctgt--aatat------tgc---------tt
i Eulemur_coronatus.k141_384460                          I 2 C 0
s Eulemur_flavifrons.k141_433119                             40342 16 +     68309 -----------------agctgt--aatat------tgc---------tt
i Eulemur_flavifrons.k141_433119                         I 2 C 0
s Eulemur_fulvus.k141_636316                                 50667 16 -     65740 -----------------agctgt--aatat------tgc---------tt
i Eulemur_fulvus.k141_636316                             I 2 C 0
s Eulemur_macaco.k141_1562045                                21297 16 -     75513 -----------------agctgt--aatat------tgc---------tt
i Eulemur_macaco.k141_1562045                            I 2 C 0
s Eulemur_mongoz.k141_232305                                 45490 16 -     97555 -----------------agctgt--aatat------tgc---------tt
i Eulemur_mongoz.k141_232305                             I 2 C 0
s Eulemur_rubriventer.k141_1423786                            2217 16 +     30972 -----------------agctgt--aatat------tgc---------tt
i Eulemur_rubriventer.k141_1423786                       I 2 C 0
s Eulemur_rufus.k141_514691                                  39940 16 -     52037 -----------------agctgt--aatat------tgc---------tt
i Eulemur_rufus.k141_514691                              I 2 C 0
s Eulemur_sanfordi.k141_1122526                              56341 16 -    111500 -----------------agctgt--aatat------tgc---------tt
i Eulemur_sanfordi.k141_1122526                          I 2 C 0
s Felis_catus.CM001381.2                                 186242954 20 - 206538554 TTTT-T-----------AGCTGT--AATAT------TTG---------A-
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                          185112736 20 - 205367284 TTTT-T-----------AGCTGT--AATAT------TTG---------a-
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24084 20 -     30238 TTTT-T-----------AGCTGT--AATAT------TTG---------A-
i Felis_nigripes.FelNig_flattened_line_31944             I 1 C 0
s Galago_moholi.ctg3793                                     119500 21 -    137831 CTGT-C-----------GGCTGT--AGTTT------TGC---------TT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3040 21 +     22493 CTGT-C-----------GGCTGT--AGTTT------TGC---------TT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16507 21 +     32986 CTGT-T-----------GGCTGT--AGTTT------TGC---------TT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15308 21 +     18121 ttgt-t-----------agctgt--aatat------ttg---------ct
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1092 21 -      8343 ttgt-t-----------agtttc--aatat------tgg---------tt
i Gorilla_beringei.k141_3358147                          I 7 C 0
s Gorilla_gorilla.LT578336.1                                 66643 21 +  33314783 ttgt-t-----------agtttc--aatat------tgg---------tt
i Gorilla_gorilla.LT578336.1                             I 16 I 470
s Hapalemur_alaotrensis.k141_330369                          12029 16 -     40692 -----------------agctgt--aatat------tgc---------tt
i Hapalemur_alaotrensis.k141_330369                      I 2 C 0
s Hapalemur_gilberti.k141_646465                             33431 16 +     49394 -----------------agctgt--aatat------tgc---------tt
i Hapalemur_gilberti.k141_646465                         I 2 C 0
s Hapalemur_griseus.k141_763500                              58299 16 -     66874 -----------------agctgt--aatat------tgc---------tt
i Hapalemur_griseus.k141_763500                          I 2 C 0
s Hapalemur_meridionalis.k141_258450                          7176 16 -     42923 -----------------agctgt--aatat------tgc---------tt
i Hapalemur_meridionalis.k141_258450                     I 2 C 0
s Hapalemur_occidentalis.k141_578367                         14172 16 -     53142 -----------------agctgt--aatat------tgc---------tt
i Hapalemur_occidentalis.k141_578367                     I 2 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26849 20 -    327341 TTGT-T-----------AGCTGT--AATAA------TTG---------A-
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546236 21 -   1711038 ttgt-t-----------agatat--catat------tcg---------ta
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45549 21 +     49977 TTGT-T-----------AGATAT--CATAT------TTG---------TA
i Hipposideros_galeritus.HipGal_scaffold_23202           I 1 C 0
s Hoolock_leuconedys.ctg274                                    138488 21 -    630532 ttgt-t-----------agtttc--aatac------tgg---------tt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65527 20 +     83186 TTTT-T-----------AGCTGT--AATAT------TTG---------A-
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1 C 0
s Hylobates_agilis.k141_1155965                               1521 21 +     12352 ttgt-t-----------agtttc--aatac------tgg---------tt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8704 21 +     55766 ttgt-t-----------agtttc--aatac------tgg---------tt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048043 21 + 191637585 ttgt-t-----------agtttc--aatac------tgg---------tt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797375 21 +  11177569 ttgt-t-----------agtttc--aatac------tgg---------tt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375385 20 +   7955117 ttgt-t-----------tgt-at--aatat------tta---------tt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                     173 16 -      1527 -----------------agctgc--aatat------tgc---------tt
i Indri_indri.k141_4600452                               I 9 C 0
s Lagothrix_lagothricha.k141_246028                          39821 21 +    110728 ttgt-t-----------agttgc--agtac------tgg---------tt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14756821 16 +  30322482 -----------------agctgt--aatat------tgc---------tt
i Lemur_catta.scaffold_24                                I 2 C 0
s Leontocebus_fuscicollis.k141_2994775                         522 21 -     13097 ttgt-t-----------agctgc--agtac------tgg---------tt
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            473 21 +      5940 ttgt-t-----------agctgc--agtac------tgg---------tt
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         104 21 -      5717 ttgt-t-----------agctgc--agtac------tgg---------tt
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6728 21 -     11567 ttgt-t-----------agctgc--agtac------tga---------tt
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8109 21 -     12945 ttgt-t-----------agctgc--agtac------tga---------tt
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5466 16 +     29618 -----------------agctgg--aatat------tgc---------tt
i Lepilemur_ankaranensis.k141_567626                     I 2 C 0
s Lepilemur_dorsalis.k141_387009                              5463 16 +     31569 -----------------agctgg--aatat------tgc---------tt
i Lepilemur_dorsalis.k141_387009                         I 2 C 0
s Lepilemur_ruficaudatus.k141_330196                          5473 16 +     24756 -----------------agctgg--aatat------tgc---------tt
i Lepilemur_ruficaudatus.k141_330196                     I 2 C 0
s Lepilemur_septentrionalis.k141_360456                       5468 16 +     16388 -----------------agctgg--aatat------tgc---------tt
i Lepilemur_septentrionalis.k141_360456                  I 2 C 0
s Leptonychotes_weddellii.KB714746.1                        809747 20 -   3914936 ttat-t-----------agCTGT--GACAT------TTG---------T-
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lophocebus_aterrimus.ctg367                               329166  7 -   1826925 ttgt-t-----------ag-------------------------------
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2476 21 +     19643 CTGt-c-----------agctgt--agttt------ttc---------tt
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036134 21 -   6120653 ctgt-c-----------agctgt--agttt------ttc---------tt
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39077344 12 +  43346337 -----------------------------cagcactctt---------ta
i Loxodonta_africana.GL010049.1                          I 861 C 0
s Lycaon_pictus.CM007581.1                                41610896 11 +  59628241 ttgt-t-----------agCTGT---------------------------
i Lycaon_pictus.CM007581.1                               I 1 I 9
s Macaca_arctoides.k141_1757516                              41446  7 -     61512 ttgt-t-----------ag-------------------------------
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369074  7 -  60120075 ttgt-t-----------ag-------------------------------
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21394  7 +     30207 ttgt-t-----------ag-------------------------------
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18497  7 -     24934 ttgt-t-----------ag-------------------------------
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21281  7 +     30527 ttgt-t-----------ag-------------------------------
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32470  7 -     50087 ttgt-t-----------ag-------------------------------
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42208  7 +     51645 ttgt-t-----------ag-------------------------------
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410782  7 - 187317192 tTGT-T-----------AG-------------------------------
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395665  7 +  25927173 tTGT-T-----------AG-------------------------------
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44797  7 -     62418 ttgt-t-----------ag-------------------------------
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21484  7 +     24253 ttgt-t-----------ag-------------------------------
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41241  7 +     59329 ttgt-t-----------ag-------------------------------
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267073  7 +    668171 ttgt-t-----------ag-------------------------------
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18419  7 +     21031 ttgt-t-----------ag-------------------------------
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32151  7 +     33478 ttgt-t-----------ag-------------------------------
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219385 21 -    270270 ttgt-t-----------agttgt--gatat------ttg---------ta
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                        318549  7 +  24302211 ttct-t-----------ag-------------------------------
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353381  7 -    752769 ttct-t-----------ag-------------------------------
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670185 20 -    737560 TTGT-T-----------AGCTCT--AATAT------TTG---------T-
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                             217479 20 +    317179 TTGT-T-----------AGCTGT--AATAT------TTG---------T-
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Marmota_marmota.CZRN01000018.1                           7489478 20 +  40650429 ttgt-t-----------tgt-at--aatat------tta---------tt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146468 23 +    207569 TTGT-T-----------AGCTGTATAGTAT------TTG---------TA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14810  1 -     74585 t-------------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_19308         I 141 I 176
s Mico_argentatus.k141_582562                                 6488 21 +     17804 ctgt-t-----------agctgc--agtcc------tgg---------tt
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7261 21 -     12984 CTGT-T-----------AGCTGC--AGTCC------TGG---------TT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15223 21 -     26561 ctgt-t-----------agctgc--agtcc------tgg---------tt
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981066 16 +  93316391 -----------------AGCTGT--AATAC------TGC---------TT
i Microcebus_murinus.CM007674.1                          I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180727 21 +    200668 TTGT-T-----------AACCGC--AGTAT------TCG---------TA
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         18539  7 -     27822 ttgt-t-----------ag-------------------------------
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4757 20 +     27589 TTAT-T-----------AGCTAT--GACAT------TTG---------T-
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 1 C 0
s Mirza_zaza.k141_766280                                     48927 16 -     62432 -----------------agctgt--aatac------tgc---------tt
i Mirza_zaza.k141_766280                                 I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174902 21 +    366855 TTGT-T-----------AGCTGT--AATAG------TTG---------TG
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14618 20 -     63510 TTGT-T-----------AGCTGT--AATAA------TTG---------A-
i Mungos_mungo.MunMun_flattened_line_18455               I 1 C 0
s Murina_feae.MurFea_scaffold_17764                          33832 21 +     47283 ttat-t-----------agctgt--gatat------ttg---------ta
i Murina_feae.MurFea_scaffold_17764                      I 1 C 0
s Mustela_putorius.JH418006.1                             14343847  1 +  14710649 t-------------------------------------------------
i Mustela_putorius.JH418006.1                            I 139 I 171
s Myotis_brandtii.KE162005.1                               9788265 21 +  10118263 ttat-t-----------agctgt--aatat------ttg---------ta
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                4378677 21 +   6019432 ttat-t-----------agctgt--aatat------ttg---------ta
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                               378496 21 +   4330536 ttat-t-----------agctgt--aatat------ttg---------ta
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        2216 21 +      3929 ttat-t-----------agctgt--aatat------ttg---------ta
i Myotis_myotis.MyoMyo_scaffold_185951                   I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116247 15 +    130748 ------------------GTTAT--ATTAT------TTA---------TA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              24825 21 +     34575 ttgt-t-----------agtttt--gatac------tgg---------tt
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465142 20 -  31847680 ttat-t-----------aGCTGT--GACAT------TTG---------T-
i Neomonachus_schauinslandi.NINY01007730.1               I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   123109 21 -    149072 TTGT-C-----------AGCTGT--AATAT------TTG---------TA
i Noctilio_leporinus.NocLep_scaffold_7894                I 1 C 0
s Nomascus_annamensis.k141_1771965                           49773 21 -    132029 ttgt-t-----------agtttc--aatac------tgg---------tt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5869 21 -     16345 ttgt-t-----------agtttc--aatac------tgg---------tt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11752 21 +     22201 ttgt-t-----------agtttc--aatac------tgg---------tt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410089 21 -  22158432 ttgt-t-----------agtttc--aatac------tgg---------tt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22152 21 -     54323 ttgt-t-----------agtttc--aatac------tgg---------tt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194511 20 +   9404916 ttgt-t-----------agCTGT--AATAT------TTG---------T-
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                             93631251 21 + 196305487 CTGT-C-----------GGCTGT--AGttt------tgc---------tt
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              640 21 +      2758 CTGT-C-----------GGCTGT--AGttt------tgc---------tt
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559530 21 - 199412804 CTGT-C-----------GGCTGT--AGttt------tgc---------tt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447922 20 +   2017862 ttgt-t-----------agCTGT--GACAT------TTG---------T-
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35574 20 +    559221 TTGT-T-----------AGCTGT--AATAT------TTG---------T-
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_85057                         22775 22 -     23432 CTCTCC-----------GGCTAT--AGTTT------TGC---------TT
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347341 21 +   1103335 CTGT-C-----------GGCTgt--agttt------tgc---------tt
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1467981 21 - 189151597 TTGT-T-----------AGTTTC--GATAT------TGG---------TT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20672 20 -    230217 TTTT-T-----------AGCTGT--AATAT------TGG---------A-
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                              18457998 20 -  18783137 TTTT-T-----------AGCTGT--AATAT------TGG---------A-
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               3968724 20 +   8748460 TTTT-T-----------AGCTGT--AATAT------TGG---------A-
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                   239393  7 - 183742232 tTGT-T-----------AG-------------------------------
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5860  7 +     21308 ttgt-t-----------ag-------------------------------
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286897  7 -  20919399 ttgt-t-----------ag-------------------------------
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18513  7 -     27687 ttgt-t-----------ag-------------------------------
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11649  7 +     16796 ttgt-t-----------ag-------------------------------
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18459  7 -     23640 ttgt-t-----------ag-------------------------------
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11590 31 +     78924 TTTT-TTTTCTTTTCTAAGCCGC--AATAA------TTG---------a-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_1921260                          21340 21 +     31479 CTGt-c-----------agctgt--agttt------tgc---------tt
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13711 21 -     24908 CTGT-C-----------AGCTGC--AGTTT------TGC---------TT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5279 21 +      7560 ttgt-t-----------agtttt--gatac------tgg---------tt
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        60986 21 -     63152 ttgt-t-----------agtttt--gatac------tgg---------tt
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43585 21 +     45295 ttgt-t-----------agtttt--gatac------tgg---------tt
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1264 21 +      5735 TTGT-T-----------AGTTTT--GATAC------TGG---------TT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 I 55
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46106 21 +     46691 ttat-t-----------agctgt--aatac------ttg---------ta
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        I 1 C 0
s Pithecia_albicans.k141_1239476                             61457 21 +    207309 ttgc-t-----------agttgc--aatcc------tgg---------tt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2577 21 -     25401 ttgt-t-----------agttgc--aatcc------tgg---------tt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28292 21 +     58159 ttgc-t-----------agttgc--aatcc------tgg---------tt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28568 21 +     63561 ttgc-t-----------agttgc--aatcc------tgg---------tt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28331 21 +     51148 ttgc-t-----------agttgc--aatcc------tgg---------tt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553324 21 -   4542175 ttgt-t-----------agttgc--aatcc------tgg---------tt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28315 21 +     51125 ttgc-t-----------agttgc--aatcc------tgg---------tt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4739 21 +     39866 ttgt-t-----------agttgc--agtac------tgg---------tt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39227 21 -     87950 ttgt-t-----------agttgc--agtac------tgg---------tt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39620 21 -     88961 ttgt-t-----------agttgc--agtac------tgg---------tt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4319 21 -     39403 ttgt-t-----------agttgc--agtac------tgg---------tt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39273 21 +     87928 ttgt-t-----------agttgc--agtac------tgg---------tt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4317 21 -     60166 ttgt-t-----------agttgc--agtac------tgg---------tt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11253 21 -     67232 ttgt-t-----------agttgc--agtac------tgg---------tt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39169 21 -     90634 ttgt-t-----------agttgc--agtac------tgg---------tt
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40637 21 +     89403 ttgt-t-----------agttgc--agtac------tgg---------tt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173598 21 - 189387572 TTGT-T-----------AGTTTT--GATAC------TGG---------TT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188596 21 -   9816681 ttgt-t-----------agtttt--gatac------tgg---------tt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23763 20 +     69807 ttgt-t-----------agtttt--gatac------tgg----------t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40958 20 -     80239 ttgt-t-----------agtttt--gatac------tgg----------t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979979 16 +   4620579 -----------------AGCTGT--AATAT------TGC---------TT
i Prolemur_simus.MPIZ01000396.1                          I 2 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562553 16 -   2598838 -----------------AGCTGC--AATAT------TGC---------TT
i Propithecus_coquerelli.NW_012148875.1                  I 2 C 0
s Propithecus_coronatus.k141_209299                            199 16 -      7103 -----------------agctgc--aatat------tgc---------tt
i Propithecus_coronatus.k141_209299                      I 2 C 0
s Propithecus_diadema.k141_153680                              795 16 -     11706 -----------------agctgt--aatat------tgc---------tt
i Propithecus_diadema.k141_153680                        I 2 C 0
s Propithecus_edwardsi.k141_635656                            4530 16 -     30655 -----------------agctat--aatat------tgc---------tt
i Propithecus_edwardsi.k141_635656                       I 2 C 0
s Propithecus_perrieri.k141_1496898                          30855 16 +     46564 -----------------agctgt--aatat------tgc---------tt
i Propithecus_perrieri.k141_1496898                      I 2 C 0
s Propithecus_tattersalli.k141_1127767                       91146 16 -     98465 -----------------agctgc--aatat------tgc---------tt
i Propithecus_tattersalli.k141_1127767                   I 2 C 0
s Propithecus_verreauxi.k141_1047036                          4768 16 +     35169 -----------------agctgt--aatat------tgc---------tt
i Propithecus_verreauxi.k141_1047036                     I 2 C 0
s Pteronotus_parnellii.KE847780.1                            47973 21 -     66298 ttgt-t-----------agtttt--gttag------ttt---------ag
i Pteronotus_parnellii.KE847780.1                        I 1 I 6
s Pteronura_brasiliensis.PteBra_flattened_line_59017          4951  1 -     10349 t-------------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 141 I 173
s Pteropus_alecto.KB030862.1                               5836888 21 -  28871421 ttgt-t-----------agctgt--gatat------ttg---------ta
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             3533463 21 -   4952924 ttgt-t-----------agctgt--gatat------ttg---------ta
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            18095550 20 +  38429054 tttt-t-----------agcTGT--AATAT------TTG---------A-
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             23150 21 +     91421 ctgt-t-----------agtttt--gatac------tgg---------tt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  149642 21 -   7812017 ctgt-t-----------agtttt--gatac------tgg---------tt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4019 21 +     72585 ctgt-t-----------agtttt--gatac------tgg---------tt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909560 21 +   3329780 ttgt-t-----------agatgt--aatat------ttg---------ta
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_221883                            24983 21 +     27361 ttgt-t-----------agtttt--gatac------tgg---------tt
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118342 21 + 195417433 ttgt-t-----------agtttt--gatAC------TGG---------TT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232591 21 -   7961872 ttgt-t-----------agtttt--gatac------tgg---------tt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70933 21 -    116970 ttgt-t-----------agctgt--gatat------ttg---------ta
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 1 C 0
s Saguinus_bicolor.k141_1429097                                452 21 +     27962 ctgt-t-----------agctgc--agtac------tgg---------tt
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              452 21 +      6077 ctgt-t-----------agctgc--agtac------tgg---------tt
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              469 21 +      5971 ctgt-t-----------agccgc--agtac------tgg---------tt
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                522 21 +      5932 ctgt-t-----------agccgc--agtac------tgg---------tt
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               672 19 -      2099 --gt-t-----------agccgc--agttc------tgg---------tt
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387711 21 - 209938924 ctgt-t-----------agctgc--agtac------tgg---------tt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 472 19 +      5979 --gt-t-----------agccgc--agttc------tgc---------tt
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                                851 21 -      4301 ctgt-t-----------agctgc--agtac------tgg---------tt
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     234901 21 +   5703754 ctgt-c-----------agttgc--agtac------tgg---------tt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4491 21 +     21866 ctgt-c-----------agttgc--agtac------tgg---------tt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112650 30 +    313613 TTAT-T-----------AGCTGT--AATAT------CTGCAATATTTATT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 8
s Semnopithecus_entellus.k141_158471                         21473 21 +     27374 ttgt-t-----------agtttt--gatac------tgg---------tt
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      24990 21 +     58920 ttgt-t-----------agtttt--gatac------tgg---------tt
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11485 21 -     45317 ttgt-t-----------agtttt--gatac------tgg---------tt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19142 21 -     42441 ttgt-t-----------agtttt--gatac------tgg---------tt
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21824 21 -     29113 ttgt-t-----------agtttt--gatac------tgg---------tt
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24896 21 -     48123 ttgt-t-----------agtttt--gatac------tgg---------tt
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854622 21 -   1910179 ttat-t-----------agctgt--aatat------ttg---------tg
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1856718 20 +   3870691 ttgt-t-----------tgt-at--aatat------tta---------tt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3243 20 -     97271 TTGT-T-----------AGCTGT--GATAT------TTC---------T-
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121212 20 +    196729 TTGT-T-----------AGCTGT--AATAA------TTG---------A-
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Symphalangus_syndactylus.tarseq_199                       387070 21 +   1523678 ttgt-t-----------agtttc--aatac------tga---------tt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1116 15 -      2009 ------------------GTTAT--ATTAT------TTA---------TA
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187718 21 +    199430 ttgt-t-----------agtggt--aatat------tcg---------ta
i Tapirus_indicus.TapInd_scaffold_7432                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101673 21 -    539355 ttgt-t-----------agtggt--aatat------ttg---------ta
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Theropithecus_gelada.CM009954.1                           349378  7 - 186847797 TTGT-T-----------AG-------------------------------
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16460 15 -     31044 ------------------GTTAT--GTTCT------TTA---------TA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475780 21 -    610378 ttgt-c-----------agctgt--gacat------ttg---------tg
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_1189070                        17037 21 +     26378 ttgt-t-----------agtttt--gatac------cgg---------tt
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29718 21 -     78344 ttgt-t-----------agtttt--gatac------tgg---------tt
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16358 21 +     25722 ttgt-t-----------agtttt--gatac------cgg---------tt
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24581 21 -     62838 ttgt-t-----------agtttt--gatac------tgg---------tt
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24698 21 +     46913 ttgt-t-----------agtttt--gatac------tgg---------tt
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5508 21 -     28527 ttgt-t-----------agtttt--gatac------tgg---------tt
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26520 21 -     64340 ttgt-t-----------agtttt--gatac------tgg---------tt
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24557 21 -     63452 ttgt-t-----------agtttt--gatac------tgg---------tt
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     5999 21 +     22490 ttgt-t-----------agtttt--gatac------tgg---------tt
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3619 21 +      4141 ttgt-t-----------agtttt--gatac------tgg---------tt
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6425 21 -     13050 ttgt-t-----------agtttt--gatac------tgg---------tt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251660 21 -   6242583 ttgt-t-----------agtttt--gatac------tgg---------tt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57392 21 +     59866 ttgt-t-----------agtttt--gatac------tgg---------tt
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1829359 21 -   4065304 TTGT-T-----------AGCTgt--aatat------ttg---------ct
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3907 21 -     70247 TTGT-T-----------AGCTGT--AATAT------TTG---------CT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103877 30 -    105689 TTAT-T-----------AGCTGT--AATAT------ATGCAATATTTATG
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 8
s Ursus_maritimus.KK499267.1                                177864 20 +   5085361 ttgt-t-----------agCTAT--GATAT------TTG---------T-
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_787544                                  21611 16 -     30710 -----------------agctgt--aatat------tgc---------tt
i Varecia_rubra.k141_787544                              I 2 C 0
s Varecia_variegata.k141_289850                              20519 16 -    147434 -----------------agctgt--aatat------tgc---------tt
i Varecia_variegata.k141_289850                          I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101258 20 -    112863 TTGT-T-----------AGCTGT--AATAT------TTG---------T-
i Vulpes_lagopus.VulLag_flattened_line_12041             I 1 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162873 20 -    224448 TTGT-T-----------TAT-AT--AATAT------TTA---------TT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25142 20 -     86975 TTGT-T-----------AGCTGT--GACAT------TTG---------T-
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tarsius_wallacei.k141_226975                                3897  0 +     20590 C
e Tarsius_lariang.k141_1780720                                3858  0 +      6850 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Cephalopachus_bancanus.k141_72622                            334  0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Carlito_syrichta.NW_007259797.1                           267169  0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        759 55 +     36723 TATT---T-CC-AGG-GCATATGGCATTTATATGCATT-----T---TAT----------TACCCTGGTTCTCATGTTT
s Allenopithecus_nigroviridis.k141_3755588                   44057 53 +     53615 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39872 53 +     44087 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68797 55 -     84148 tatt---t-cc-agg-gcatgtggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41020 55 -     78289 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40468 55 +     55831 tatt---t-cc-agg-gcatgtggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38909 55 -     64179 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20552 55 -     24835 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37535 55 +     45454 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43234 55 +     70886 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5361 55 +     30854 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29500 55 +     42133 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172772 55 -    412891 TGTT---C-CT-AG-GGCACAGGACATTTCTAT-----TCATTT---TGT----------TATGCTGATTCCTATGTTT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 47
s Aotus_azarae.k141_118258                                   47309 55 -     65372 tatg---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41055 55 +     43593 tatg---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctcgttcttatgttt
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669067 55 +   5030052 TATG---T-CC-AGG-GCATATggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20709 55 -     23494 tatg---t-cc-agg-gcatatggcatttgtatttgtt-----t---tat----------taccctggttcttatgttt
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5845 55 +      8415 tatg---t-cc-agg-gcatatggcatttgtatttgtt-----t---tat----------taccctggttcttatgttt
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      12021 55 -     32367 GTTT---T-CC-AAG-GCATATGACATTCATATTCATT-----C---TAC----------TATCCTGACtttgctactt
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 98
s Arctocebus_calabarensis.k141_1364444                       15938 34 -     45910 -------------------------ATCTGCCTTCATT-----T---GAT------------ACCTGATTCTCACAGTT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   613 55 -     15198 TGTT---C-CC-AG-GGCACAGGACACTTCCAT-----TCATTT---TAT----------GATGCTGATTCCTGTGTTT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 47
s Ateles_geoffroyi_b.tarseq_1536                               271295 55 +  21539123 tact---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttacgttt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7466 55 +     48076 tact---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttacattt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2600 55 -     28759 tact---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttacattt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30152 55 +     44353 tact---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttacgttt
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45527 55 -     71267 tact---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttacattt
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19583 55 -     33135 tact---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttacattt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2700 55 +     11645 tact---t-tt-agg-gcatatggcatttacattcctt-----c---tgt----------tcccctgactctcatgttt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2702 55 -     19611 tact---t-tt-agg-gcatatggcatttacattcctt-----c---tgt----------tcccctgactctcatgttt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4487 55 +     28062 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39781 55 -     91139 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17307 55 +     95584 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17220 55 +    119600 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6725 55 +     18648 tatt---t-cc-agg-gcatatggcatttgtatgtatt-----t---tat----------taccctggttcttatgttt
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6401 55 -     13885 tatt---t-cc-agg-gcatatggcatttgtatgtatt-----t---tat----------taccctggttcttacgttt
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15087 55 +     17162 tatt---t-cc-agt-gcatacggcatttgtatgtatt-----t---tat----------taccctggttcttatgttt
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450043 55 + 189096842 TATT---T-CC-AGT-GCATACGGCATTTGTATGTATT-----T---TAT----------TACCCTGGTTCTTATGTTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16336 55 -     18408 tatt---t-cc-agt-gcatatggcatttgtatgtatt-----t---tat----------taccctggttcttatgttt
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267169 21 +    496798 ------------------------------------------------AT----------TACCCTGCTTCTCATGGTT
i Carlito_syrichta.NW_007259797.1                        C 0 I 18
s Carollia_perspicillata.CarPer_scaffold_170178                659 55 +      5315 TGTT---C-CT-AG-GGCACAGGACACTTCTAT-----TCATTT---TAT----------TATGCTGATTCCTGTGTTT
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 47
s Cebuella_niveiventris.k141_592277                           1621 55 -     12580 tatt---t-cc-agg-gcatatggcatttgtatgtatt-----t---tat----------taccctggttcttatgttt
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39507 55 +     53515 tatt---t-cc-agg-gcatatggcatttgtatgtatt-----t---tat----------taccctggttcttatgtat
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367699 55 -  26074798 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4588 55 -     34880 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63683 55 -     89041 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            334 21 -      1636 ------------------------------------------------at----------taccctgcttctcatggtt
i Cephalopachus_bancanus.k141_72622                      C 0 I 18
s Ceratotherium_simum.JH767749.1                          15488719 55 -  27778364 tatt---t-cc-ag-ggtatatgacatttacattcatt-----t---tat----------taccctgattcccatgttt
i Ceratotherium_simum.JH767749.1                         C 0 I 43
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15552 55 +     27315 tatt---t-cc-ag-ggtatatgacatttacattcatt-----t---tat----------taccctgattcccatgttt
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 43
s Cercocebus_atys.KQ010504.1                                137217 53 -   4669795 --TT---T-CC-AGG-GCATATggcatttatattcatt-----t---tat----------taccCTGGTTCCtgtgttt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       40958 53 +     47900 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40790 53 -     44860 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40772 53 -    148725 --tt---t-ct-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23831 53 -     40656 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3766 53 +     20796 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8021 53 -     17524 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23710 53 -     34525 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8421 53 -     25376 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  360986 53 -  39242232 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcccgtgttt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266732 53 +  21565898 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28184 53 -     45857 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       23975 53 -     32606 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcccgtgttt
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          162 53 +      8499 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Cercopithecus_petaurista.k141_42573                    I 1 C 0
s Cercopithecus_pogonias.k141_6079                           21674 53 +     70610 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18539 53 +     36323 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9491 55 -     19938 TGTC---A-CC-AGG-TCATAGGGTATTGGCATTCTTT-----C---CAT----------TATCCTGATTCCCATGTTT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 35
s Cheirogaleus_major.k141_666340                             27118 55 -     33796 tact---t-tt-agg-gcatatggcatttacattcatt-----c---tgt----------tcccctggctttcatgttt
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1313 55 -     15404 tact---t-tt-agg-gcatatgtcatttatattcatt-----c---tgt----------tcccctggctttcatgttt
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5585 50 -     32913 tatt---t-cc-agg-gcatatggcatttgtat----------t---tat----------taccctggttcttatgttt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             15998 50 -     40346 tatt---t-cc-agg-gcatatggcatttgtat----------t---tat----------taccctggttcttatgttt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16262 50 +    216457 tatt---t-cc-agg-gcatatggcatttgtat----------t---tat----------taccctggttcttatgttt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16041 50 +     39636 tatt---t-cc-agg-gcatatggcatttgtat----------t---tat----------taccctggttcttatgttt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            475 55 +      5346 tact---t-cc-agg-gcatatggcatctgtatttatt-----t---tat----------taccctggttcttaggttt
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39128 55 -    112038 tact---t-cc-agg-gcgtatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4700 55 +     34062 tact---t-cc-agg-gcgtatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339435 53 +  18827391 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6046 53 -     44032 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300761 53 - 135778131 --TT---T-CC-AGG-GCATATggcatttatattcatt-----t---tat----------tacccTGGTTCCtgtgttt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405308 55 -   2368649 TATT---T-CC-AGG-GCATGTggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374467 55 - 200372422 tatt---t-cc-agg-gcatgtggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5192 55 -      6605 tatt---t-cc-agg-gcatgtggcatttatattcatt-----t---tat----------taccctggttctcatgtgt
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803635 53 +  53390261 TATC---T-CC-AG--GCATCTGGAATTTATGTTTGCT-----T---TAC----------TAC-CTGAGTTCCATGTTT
i Condylura_cristata.JH655891.1                          I 8 I 18
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9025 55 +     10921 tatt---t-ct-ag-agcatatgacatttacattgatt-----t---tag----------tccccagatttcagtgttt
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 I 33
s Dasypus_novemcinctus.JH564415.1                          2105697 55 -   2246927 TGTT---G-TT-CGT-TCATATGGTATTGGCATTCTTT-----C---CAT----------TATCCTGATACTCATGTTT
i Dasypus_novemcinctus.JH564415.1                        C 0 I 32
s Daubentonia_madagascariensis.ctg71                        289150 55 +  12879189 tact---t-tt-agg-gcgtatggcatttacattcatt-----c---tgt----------taccctgattctcatgttt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661006 55 -   1390856 tatt---t-cc-ag-ggtatatgacatttacattcatt-----t---tat----------taccctgattctcatgttt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 43
s Diceros_bicornis.DicBicMic_scaffold_5955                  135795 55 -    198055 tatt---t-cc-ag-ggtatatgacatttacattcatt-----t---tat----------taccctgattcccatgttt
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 43
s Eidolon_helvum.AWHC01266696.1                               2351 55 +     19438 tatt---t-cc-ag-agcatatgacatttgcattcatt-----t---tat----------taccctgattcctatgttt
i Eidolon_helvum.AWHC01266696.1                          C 0 I 42
s Eptesicus_fuscus.JH977646.1                             12573934 54 +  14770903 tatt---c-c--ag-agcacatgacatttacattcatt-----t---tat----------taccttgattcctatgttt
i Eptesicus_fuscus.JH977646.1                            C 0 I 43
s Equus_asinus.JREZ01000139.1                              3037976 55 -   4378816 tatt---t-cc-aa-ggcatatgacatttacattcatt-----t---tat----------tagcctgattcctgtgttt
i Equus_asinus.JREZ01000139.1                            C 0 I 43
s Equus_caballus.CM000403.2                               21371910 55 +  39960074 tatt---t-cc-aa-ggcatatgacatttacattcatt-----t---tat----------taccctgattcctgtgttt
i Equus_caballus.CM000403.2                              C 0 I 43
s Equus_przewalskii.KK951119.1                              408696 55 -    498745 tatt---t-cc-aa-ggcatatgacatttacattcatt-----t---tat----------taccctgattcctgtgttt
i Equus_przewalskii.KK951119.1                           C 0 I 43
s Erythrocebus_patas.Contig38                               258993 53 +  21539334 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12114 55 -     24895 tact---t-tt-agg-gcatatggcatttacattcatt-----c---tgt----------tcccctgactcacatgttt
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39826 55 -     70999 tact---t-tt-agg-gcatatggcatttacattcatt-----c---tgt----------tcccctgactcacatgttt
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83786 55 +    112731 tact---t-tt-agg-gtatatggcatttacattcatt-----c---tgt----------tcccctgactcacatgttt
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40358 55 +     68309 tact---t-tt-agg-gcatatggcatttacattcatt-----c---tgt----------tcccctgactcacatgttt
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50683 55 -     65740 tact---t-tt-agg-gcatatggcatttacattcatt-----c---tgt----------tcccctgactcacatgttt
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21313 55 -     75513 tact---t-tt-agg-gcatatggcatttacattcatt-----c---tgt----------tcccctgactcacatgttt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45506 55 -     97555 tact---t-tt-agg-gcatatggcatttacattcatt-----c---tgt----------tcccctgactcacatgttt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2233 55 +     30972 tact---t-tt-agg-gcatatggcatttacattcatt-----c---tgt----------tcccctgactcacatgttt
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  39956 55 -     52037 tact---t-tt-agg-gcatatggcatttacattcatt-----c---tgt----------tcccctgactcacatgttt
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56357 55 -    111500 tact---t-tt-agg-gcatatggcatttacattcatt-----c---tgt----------tcccctgactcacatgttt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg3793                                     119521 53 -    137831 TATT---T-TC-AGG-GCCCACAGCATCTGCCTTCATT-----T---GAT------------ACCCGATTCTCACATTT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3061 53 +     22493 TATT---T-TC-AGG-GCCCACAGCATCTGCCTTCATT-----T---GAT------------ACCCGATTCTCACATTT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16528 53 +     32986 TATT---T-TC-AGG-GCCCACAGCATCTGCCTTCATT-----T---GAT------------ACCCGAGTCTCACGTTT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15329 55 +     18121 tatt---t-cc-agg-gcatatggcatttacattcatt-----t---tat----------taccctgattctcatgttt
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 171
s Gorilla_beringei.k141_3358147                               1113 55 -      8343 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250613 55 - 186649187 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Gorilla_gorilla.LT578341.1                             I 21 C 0
s Hapalemur_alaotrensis.k141_330369                          12045 58 -     40692 tact---t-tt-agg-gcatatggcatttacattcatt--cccc---tgt----------tcccctgactctcatgttt
i Hapalemur_alaotrensis.k141_330369                      C 0 I 6
s Hapalemur_gilberti.k141_646465                             33447 58 +     49394 tact---t-tt-agg-gcatatggcatttacattcatt--cccc---tgt----------tcccctgactctcatgttt
i Hapalemur_gilberti.k141_646465                         C 0 I 6
s Hapalemur_griseus.k141_763500                              58315 58 -     66874 tact---t-tt-agg-gcatatggcatttacattcatt--cccc---tgt----------tcccctgactctcatgttt
i Hapalemur_griseus.k141_763500                          C 0 I 6
s Hapalemur_meridionalis.k141_258450                          7192 58 -     42923 tact---t-tt-agg-gcatacggcatttacattcatt--cccc---tgt----------tcccctgactctcatgttt
i Hapalemur_meridionalis.k141_258450                     C 0 I 6
s Hapalemur_occidentalis.k141_578367                         14188 58 -     53142 tact---t-tt-agg-gcatatggcatttacattcatt--cccc---tgt----------tcccctgactctcatgttt
i Hapalemur_occidentalis.k141_578367                     C 0 I 6
s Hipposideros_armiger.JXIK01000431.1                      1546257 54 -   1711038 tatt---t-cc-ag-agcatatg-catttaaatttatt-----a---tat----------taccctaattcccatgttt
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 37
s Hipposideros_galeritus.HipGal_scaffold_23202               45570 55 +     49977 TATT---T-CC-AG-GGCATATGATATTTAAATTTATT-----T---TAT----------TACCCTAATTCCCAGGTTT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 41
s Hoolock_leuconedys.ctg274                                    138509 55 -    630532 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcttatgttt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               1542 55 +     12352 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcaggttt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8725 55 +     55766 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcaggttt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048064 55 + 191637585 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797396 55 +  11177569 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375405 55 +   7955117 tatt---t-cc-agg-gcatatggcatttatattcatt-----c---tat----------tatcctgattttcctattt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                     189 55 -      1527 tact---t-tt-agg-gcatatggcatttatattcatt-----c---tgt----------tcctctgactctcatgttt
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39842 55 +    110728 tatt---t-cc-agg-gtatgtggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14756837 58 +  30322482 tact---t-tt-agg-gcatatggcgtttacattcatt--cccc---tgt----------tcccctgactctcatgttt
i Lemur_catta.scaffold_24                                C 0 I 6
s Leontocebus_fuscicollis.k141_2994775                         543 55 -     13097 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttaggttt
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            494 55 +      5940 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttaggttt
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         125 55 -      5717 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttagcttt
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6749 55 -     11567 tatt---t-cc-ggg-gcatatggcatttgtatgtatt-----t---tat----------tgccctggttcttatgttt
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8130 55 -     12945 tatt---t-cc-ggg-gcatatggcatttgtatgtatt-----t---tat----------taccctggttcttatgttt
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5482 56 +     29618 tact---t-tttagg-gcacatggcatttacattcatt-----c---tgt----------taccccggctctgatgttt
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5479 56 +     31569 tact---t-tttagg-gcacatggcatttacattcatt-----c---tgt----------taccccggctctgatgttt
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5489 56 +     24756 tagt---t-tttagg-gcacatggcatttgcattcatt-----c---tgt----------taccccggctctgatgttt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5484 56 +     16388 tact---t-tttagg-gcacatggcatttacattcatt-----c---tgt----------taccccggctctgatgttt
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               329173 53 -   1826925 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2497 50 +     19643 t------t-tc-agg-gcccatggcatctgccttcatt-----t---gat------------acctgattctcatgttt
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036155 50 -   6120653 t------t-tc-agg-gcccatggcatctgccttcatt-----t---gat------------acctgattctcatgttt
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39077356  5 +  43346337 tttt---t-----------------------------------------------------------------------
i Loxodonta_africana.GL010049.1                          C 0 I 28
s Macaca_arctoides.k141_1757516                              41453 53 -     61512 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369081 53 -  60120075 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21401 53 +     30207 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18504 53 -     24934 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21288 53 +     30527 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32477 53 -     50087 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42215 53 +     51645 --tt---t-cc-agg-gcatatggcacttatattcatt-----t---tat----------taccctggttcctgtgttt
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410789 53 - 187317192 --TT---T-CC-AGG-GCATATggcatttatattcatt-----t---tat----------taccCTGGTTCCtgtgttt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395672 53 +  25927173 --TT---T-CC-AGG-GCATATggcatttatattcatt-----t---tat----------taccCTGGTTCCtgtgttt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44804 53 -     62418 --tt---t-cc-agg-gcatatggcacttatattcatt-----t---tat----------taccctggttcctgtgttt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21491 53 +     24253 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41248 53 +     59329 --tt---t-cc-agg-gcatatggcacttatattcatt-----t---tat----------taccctggttcctgtgttt
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267080 53 +    668171 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18426 53 +     21031 --tt---t-cc-agg-gcatatagcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32158 53 +     33478 --tt---t-cc-agg-gcatatggcacttatattcatt-----t---tat----------taccctggttcctgtgttt
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219406 55 -    270270 tatt---t-cc-ag-agcatatgacatttacattcatt-----t---tat----------taccctgattcccatgttt
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 42
s Mandrillus_leucophaeus.scaffold280                        318556 53 +  24302211 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353388 53 -    752769 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7489498 55 +  40650429 tatt---t-cc-agg-gcatatggcatttatattcatt-----c---tat----------tatcctgattttcccattt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146491 55 +    207569 CATT---T-CT-AG-AGAATATGATGTATGCATCAATT-----T---TAT----------TACCTTGCTTCCCATGTTT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 39
s Mico_argentatus.k141_582562                                 6509 55 +     17804 tatt---t-cc-agg-gcatatggcatttgtatgtatt-----t---tat----------taccctggttcttatgttt
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7282 55 -     12984 Tatt---t-cc-agg-gcatatggcatttgtatgtatt-----t---tat----------taccctggttcttatattt
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15244 55 -     26561 tatt---t-cc-agg-gcatatggcatttgtatgtatt-----t---tat----------taccctggttcttatgttt
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981082 55 +  93316391 TACT---T-TT-AGG-GCATATGACATTTACATTCATT-----C---TGT----------TCCCCTGGCTCTcatgttt
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180748 55 +    200668 TGAT---C-CT-AG-AGCACAGGCCATTTCCAT-----TCATTT---TAT----------TACCCCGATTCCTACGTTT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 47
s Miopithecus_ogouensis.k141_1534655                         18546 53 -     27822 --tt---t-cc-agg-gcatatggagtttatattcatt-----t---tat----------taccctggttcctgtgttt
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     48943 55 -     62432 tact---t-tt-agg-gcatatgacatttacattcatt-----c---tgt----------tcccctggctctcatgttt
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 174923 55 +    366855 TATT---C-CT-GG-AGCAAATGGCATTTACAA-----TCATTT---TAT----------TCCCCTGATTCCTATGTTT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 47
s Murina_feae.MurFea_scaffold_17764                          33853 55 +     47283 tatt---ccc--ag-agcatacgacatttacactcatt-----t---tat----------taccctggttcctatgttt
i Murina_feae.MurFea_scaffold_17764                      C 0 I 43
s Myotis_brandtii.KE162005.1                               9788286 55 +  10118263 tatt---ccc--ag-agcatatgacatttacattcatt-----t---tat----------taccctgattcctatgttt
i Myotis_brandtii.KE162005.1                             C 0 I 43
s Myotis_davidii.KB100139.1                                4378698 55 +   6019432 tatt---ccc--ag-agcatatgacatttacattcact-----t---tat----------taccctgattcctatgttt
i Myotis_davidii.KB100139.1                              C 0 I 43
s Myotis_lucifugus.GL429869.1                               378517 55 +   4330536 tatt---ccc--ag-agcatatgccatttacattcatt-----t---tat----------taccctgattcctacgttt
i Myotis_lucifugus.GL429869.1                            C 0 I 43
s Myotis_myotis.MyoMyo_scaffold_185951                        2237 55 +      3929 tatt---ccc--ag-agcatatgacatttacattcatt-----t---tat----------taccctgattcctatgttt
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 I 43
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116262 55 +    130748 TATT---G-TG-GGG-TCATATGTTACTTACTTTCTTT-----C---TAT----------TATCCTAATTCTGATATTT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 29
s Nasalis_larvatus.k141_1350636                              24846 55 +     34575 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   123130 50 -    149072 TCTT---C-CT-AG-AGCACAGGTCATTTATAT----------T---TAT----------TGCCCCGATTCCTATGTTT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 47
s Nomascus_annamensis.k141_1771965                           49794 55 -    132029 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5890 55 -     16345 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11773 55 +     22201 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410110 55 -  22158432 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22173 55 -     54323 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93631272 50 + 196305487 t------t-tc-tgg-gcccacagcatctgccttcatt-----t---gat------------acctgattctcatgttt
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              661 50 +      2758 t------t-tc-tgg-gcccacagcatctgccttcatt-----t---gat------------acctgattctcatgttt
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559551 50 - 199412804 t------t-tc-tgg-gcccacaacatctgccttcatt-----t---gat------------acctgattctcatgttt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Otolemur_crassicaudatus.k141_85057                         22797 53 -     23432 TATT---T-TC-AGG-GCCCACAGCATCTGCCTTCATT-----T---GAT------------ACCCGATTTTCACATTT
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347362 53 +   1103335 tatt---t-tc-agg-GCCCACAGCATCTGCCTTCATT-----T---GAT------------ACCCGATTTTCACATTT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468002 55 - 189151597 TATT---T-CC-AGG-GCATATggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   239400 53 - 183742232 --TT---T-CC-AGG-GCATATggcatttatattcatt-----t---tat----------taccCTGGTTCCtgtgttt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5867 53 +     21308 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286904 53 -  20919399 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18520 53 -     27687 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11656 53 +     16796 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18466 53 -     23640 --tt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttcctgtgttt
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21361 53 +     31479 t---attt-tc-aga-gcacatggcatctgccttcatt-----t---gat------------acctgattctcacggtt
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13732 53 -     24908 T---ATTT-TC-AGA-GCACATGGCATCTGCCTTCATT-----T---GAT------------ACCTGATTCTCACGGTT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5300 55 +      7560 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------tatcctggttctcacgttt
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61007 55 -     63152 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------tatcctggttctcacgttt
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43606 55 +     45295 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------tatcctggttctcacgttt
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02035043.1                    1285 55 +      5737 TATT---T-CC-AGG-GCATATggcatttatattcatt-----t---tat----------tatcctGGTTCTCacgttt
i Piliocolobus_tephrosceles.PDMG02035043.1               n 55 I 721
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46127 55 +     46691 tatt---ccc--ag-agtatctgacatttacattcgtt-----t---tat----------taccctgattcctatgttt
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 I 43
s Pithecia_albicans.k141_1239476                             61478 55 +    207309 tatc---t-cc-agg-gcatatggcatttggatttatt-----t---tat----------taccctggttcttgtgttt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2598 55 -     25401 catc---t-cc-agg-gcatatggcatttggatttatt-----t---tat----------taccctggttcttgtgttt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28313 55 +     58159 tatc---t-cc-agg-gcatatggcatttggatttatt-----t---tat----------taccctggttcttgtgttt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28589 55 +     63561 tatc---t-cc-agg-gcatatggcatttggatttatt-----t---tat----------taccctggttcttgtgttt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28352 55 +     51148 tatc---t-cc-agg-gcatatggcatttggatttatt-----t---tat----------taccctggttcttgtgttt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553345 55 -   4542175 catc---t-cc-agg-gcatatggcatttggatttatt-----t---tat----------taccctggttcttgtgttt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28336 55 +     51125 tatc---t-cc-agg-gcatatggcatttggatttatt-----t---tat----------taccctggttcttgtgttt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4760 49 +     39866 tatt---t-gc-agg-gcataaggcatttgtat----------t---tat----------tacc-tggttcttatgttt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39248 49 -     87950 tact---t-cc-agg-gcataaggcatttgtat----------t---tat----------tacc-tggttcttatgttt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39641 49 -     88961 taat---t-cc-agg-ccataaggcatttgtat----------t---tat----------tacc-tggttcttatgttt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4340 49 -     39403 tact---t-cc-agg-gcataaggcatttgtat----------t---tat----------tacc-tggttcttatgttt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39294 49 +     87928 tact---t-cc-agg-gcataaggcatttgtat----------t---tat----------tacc-tggttcttatgttt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4338 49 -     60166 tatt---t-cc-agg-gcataaggcatttgtat----------t---tat----------tacc-tggttcttatgttt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11274 49 -     67232 tatt---t-cc-agg-gcataaggcatttgtat----------t---tat----------tacc-tggttcttatgttt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39190 49 -     90634 tatt---t-cc-agg-gcataaggcatttgtat----------t---tat----------tacc-tggttcttatgttt
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40658 49 +     89403 tatt---t-cc-agg-gcataaggcatttgtat----------t---tat----------tacc-tggttcttatgttt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173619 55 - 189387572 TATT---T-CC-AGG-GCATATggcatttatattcatt-----t---tat----------taccCTGGTTCTcatgttt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188617 55 -   9816681 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23783 55 +     69807 tatt---t-cc-agg-gcatatggcaattatattcatt-----t---tat----------taccctggttctcatgttt
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              40978 55 -     80239 tatt---t-cc-agg-gcatatggcaattatattcatt-----t---tat----------taccctggttctcatgttt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1979995 58 +   4620579 TACT---T-TT-AGG-GCATATGGCATTTACATTCATT-C-CCC---TGT----------TCCCCTGACTCTCATGTTT
i Prolemur_simus.MPIZ01000396.1                          C 0 I 6
s Propithecus_coquerelli.NW_012148875.1                    1562569 55 -   2598838 TACT---T-TT-AGG-GCATATGGCATTTACATTCATT-----C---TGT----------TCCCCTGACTCTcatgttt
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            215 55 -      7103 tact---t-tt-atg-gcatatgacatttacattcatt-----c---tgt----------tcccctgactctcatgttt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                              811 55 -     11706 tact---t-tt-agg-gcatatggcatttacattcatt-----c---tgt----------tctcctgactctcatgttt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4546 55 -     30655 tact---t-tt-agg-gcatatggcatttacattcatt-----c---tgt----------tcccctgactctcatgttt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30871 55 +     46564 tact---t-tt-agg-gcatatggcatttacattcatt-----c---tgt----------tcccctgactctcatgttt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91162 55 -     98465 tact---t-tt-agg-gcatatggcatttacattcatt-----c---tgt----------tcccctgactctcatgttt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4784 55 +     35169 tact---t-tt-agg-gcatatggcatttacattcatt-----c---tgt----------tcccctgactctcatgttt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48000 40 -     66298 ---------------------tgccatttatac-----ccattt---tat----------ttccctgattcctgtgttt
i Pteronotus_parnellii.KE847780.1                        I 6 I 47
s Pteropus_alecto.KB030862.1                               5836909 55 -  28871421 tatt---t-cc-ag-agcatatgacatttacattcatt-----t---tat----------taccctgattcccatgttt
i Pteropus_alecto.KB030862.1                             C 0 I 42
s Pteropus_vampyrus.KN525825.1                             3533484 55 -   4952924 tatt---t-cc-ag-agcatatgacatttacattcatt-----t---tat----------taccctgattcccatgttt
i Pteropus_vampyrus.KN525825.1                           C 0 I 42
s Pygathrix_cinerea.k141_1153803                             23171 55 +     91421 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  149663 55 -   7812017 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4040 55 +     72585 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909581 55 +   3329780 tatt---t-cc-ag-agcatataacatttacatttatt-----t---tag----------tacactaattcccaggttt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 37
s Rhinopithecus_bieti.k119_221883                            25004 55 +     27361 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118363 46 + 195417433 TATT---T-CC-AGg-gca---------tatattcatt-----t---tat----------taccCTGGTTCTcatgttt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232612 55 -   7961872 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 70954 55 -    116970 tatt---t-cc-ag-agcatatgacatttacattcatt-----t---tat----------taccctgattcccatgttt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 42
s Saguinus_bicolor.k141_1429097                                473 55 +     27962 tact---t-cc-agg-gcatatggcatctgtatttatt-----t---tat----------taccctggttcttaggttt
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              473 55 +      6077 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttaggttt
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              490 55 +      5971 tatt---t-cc-agg-gcatgtggcatttgtatttatt-----t---tat----------taccctggttcttaggttt
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                543 55 +      5932 tatt---t-cc-agg-gcatgaggcatttgtatttatt-----t---tat----------taccctggttcttaggttt
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               691 55 -      2099 tatt---t-cc-agg-gcatgaggcacttgtatttatt-----t---tat----------caccctggttcttaggttt
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387732 55 - 209938924 tatt---t-cc-agg-gcatatggcatctgtatttatt-----t---tat----------taccctggttcttaggttt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 491 55 +      5979 tatt---t-cc-agg-gcatgaggcacttgtatttact-----t---tat----------caccctggttcttaggttt
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                                872 55 -      4301 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttaggttt
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     234922 55 +   5703754 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4512 55 +     21866 tatt---t-cc-agg-gcatatggcatttgtatttatt-----t---tat----------taccctggttcttatgttt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112688 54 +    313613 TATC---T-CA-AG--GCTTCTGGAATTGATGTTCATT-----T---TAT----------TACCCTGATTTCCATGTTT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 8 I 18
s Semnopithecus_entellus.k141_158471                         21494 55 +     27374 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25011 55 +     58920 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11506 55 -     45317 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19163 55 -     42441 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21845 55 -     29113 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24917 55 -     48123 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854643 58 -   1910179 tatt---t-cc-agg-gtttatggaatttacttccttt--tttt---cct----------caccctgattcccatgttt
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 27
s Spermophilus_dauricus.KZ294078.1                         1856738 55 +   3870691 tatt---t-cc-agg-gcatatggcatttatattcatt-----c---tat----------tatcctgattttcctattt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387091 55 +   1523678 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcaggttt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1131 55 -      2009 TATT---G-TG-GGG-TCATGTGGTACTTACTTTCTTT-----C---TAT----------TTTCCTAATGCTGATGTTT
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 I 33
s Tapirus_indicus.TapInd_scaffold_7432                      187739 55 +    199430 tatt---t-cc-ag-ggcatatgatgtttatgttcatt-----t---tat----------taccctaattcccatgttt
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 43
s Tapirus_terrestris.TapTer_scaffold_755                    101694 55 -    539355 tatt---t-cc-ag-ggcatatgatgtttatgttcatt-----t---tat----------taccctaattcccacgttt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 43
s Tarsius_lariang.k141_1780720                                3858 21 +      6850 ------------------------------------------------AT----------TACCCTGCTTCTTATGGTT
i Tarsius_lariang.k141_1780720                           C 0 I 18
s Tarsius_wallacei.k141_226975                                3897 21 +     20590 ------------------------------------------------GT----------TACCCTGCTTCTCATGGTT
i Tarsius_wallacei.k141_226975                           C 0 I 18
s Theropithecus_gelada.CM009954.1                           349385 53 - 186847797 --TT---T-CC-AGG-GCATATggcatttatattcatt-----t---tat----------taccCTGGTTCCtgtgttt
i Theropithecus_gelada.CM009954.1                        C 0 I 24
s Tolypeutes_matacus.TolMat_scaffold_31955                   16475 55 -     31044 TGTC---A-CC-AGG-TCATATGGTATTGGCATTCTTT-----C---CAT----------TATCCTGATTCTCATGTTT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 32
s Tonatia_saurophila.TonSau_scaffold_294                    475801 55 -    610378 tgtt---c-ct-ag-ggcacgggacatttccat-----tcattt---tat----------tatgctgattcctatattt
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 47
s Trachypithecus_auratus.k141_1189070                        17058 55 +     26378 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29739 55 -     78344 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16379 55 +     25722 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24602 55 -     62838 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24719 55 +     46913 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5529 55 -     28527 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26541 55 -     64340 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24578 55 -     63452 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6020 55 +     22490 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3640 55 +      4141 tatt---t-cc-agg-gcacatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6446 55 -     13050 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251681 55 -   6242583 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57413 55 +     59866 tatt---t-cc-agg-gcatatggcatttatattcatt-----t---tat----------taccctggttctcatgttt
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1829380 65 -   4065304 tatt---t-aa-agG-GCACAAGGCATTTACacttatt-----g---tatttattaattttaccccgattctcatgttt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       3928 65 -     70247 TATT---T-AA-AGG-GTATACGGCATTTACACTTACT-----G---TATTTATTAATTTTACCCCGATTCTCATGTTT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   103915 54 -    105689 TATT---T-CC-AG--GCATATGGAATTTATGTTCATT-----T---TAT----------TACTCTGATTTCCATGTTT
i Uropsilus_gracilis.UroGra_scaffold_7153                I 8 I 13
s Varecia_rubra.k141_787544                                  21627 58 -     30710 tacc---t-tc-agg-gcatatggcatttacatttatt-----cccttgt----------tcccctgactgtcatgttt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20535 58 -    147434 tact---t-tc-agg-gcatatggcatttacatttatt-----cccttgt----------tcccctgactgtcatgttt
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162893 55 -    224448 CATT---T-CT-AGG-GCATATGGCACTTATATTCATT-----C---TAT----------TGTCCTGGTCTTCCTATTT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Zalophus_californianus.ZalCal_flattened_line_17732         25162  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                101278  0 -    112863 C
e Ursus_maritimus.KK499267.1                                177884  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              3263  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_59017          4952 173 -     10349 I
e Otocyon_megalotis.JAEUCK010005147.1                        35594  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1447942  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                194531  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11465162  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14343848 171 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         4777  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             14811 176 -     74585 I
e Lycaon_pictus.CM007581.1                                41610907  9 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        809767  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24906795 171 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45103331  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41611761  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          218636  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     5275  0 -     23171 C
e CanFam4.chr16                                           42501645  0 +  60362399 C
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20411208  0 +  29979442 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             121232  0 +    196729 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18095570  0 +  38429054 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11621  0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3968744  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18458018  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   20692  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Mungos_mungo.MunMun_flattened_line_18455                   14638  0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Manis_pentadactyla.KN006162.1                             217499  0 +    317179 C
e Manis_javanica.JSZB01003497.1                             670205  0 -    737560 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  65547  0 +     83186 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                26869  0 -    327341 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 24104  0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185112756  0 - 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129               553  0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           809316  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                        814 113 +     36723 A-TTTTAG----TT-TT-----AGTCA---ACACAA-TT--CACAATT-ATAATAT--TTC-ACCA--TAGTTTT-TC-CTTAG---------TT--ATCTCTTT---------GTTGGCTAAAGTTT-GTTCTCT--GGGACTTTTCCCAAGTAGGA-A-A--A
s Acinonyx_jubatus.LLWD01001279.1                           809316   1 +   1699592 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411208   1 +  29979442 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44110 111 +     53615 a-ttttag----tt-tt-----agtca---atgcag-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--ggggtttttcccaagtagga-a-g--a
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          39925 111 +     44087 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tca--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--gggttttttcccaagtagga-a-g--a
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68852 111 -     84148 a-ttttag----tt-tt-----agtca---attcag-tt--cacaatt-ataatgt--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attgcctgaagttt-attctct--gggattcttcccaagtagaa-a-a--a
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41075 111 -     78289 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaatt-ataatgt--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attgcctgaagttt-attctct--gggattcttcccaagtggaa-a-a--a
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40523 111 +     55831 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaatt-ataatgt--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attgcctgaagttt-attctct--gggattcttcccaagtagaa-a-a--a
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                38964 111 -     64179 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaatt-ataatgt--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attgcctgaagttt-attctct--gggattcttcccaagtagaa-a-a--a
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20607 111 -     24835 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaatt-ataatgt--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attgcctgaagttt-attctct--gggattcttcccaagtagaa-a-a--a
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37590 111 +     45454 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaatt-ataatgt--ttc-acca--tag--tt-tc-tttag---------tc--atctcttt---------attgcctgaagttt-attctct--gggattcttcccaagtagaa-a-a--a
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43289 111 +     70886 a-ttttag----tt-tt-----agtca---atttaa-tt--cacaatt-ataatgt--ttc-acca--tag--tt-tc-tttag---------tc--atctcttt---------attgcctgaagttt-attctct--gggattcttcccaagtagaa-a-a--a
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5416 111 +     30854 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaatt-ataatgt--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attgcctgaagttt-attccct--gggattcttcccaagtagaa-a-a--a
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29555 111 +     42133 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaatt-ataatgt--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attgcctgaagttt-attctct--gggattcttcccaagtagaa-a-a--a
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172874  51 -    412891 ----------------------------------------------------------------------------------------------t--atctct-g---------gttggctgaagttc-actgcct--agtagttttcccaagtagga-a-a---
i Anoura_caudifer.AnoCau_scaffold_1412                   I 47 C 0
s Aotus_azarae.k141_118258                                   47364 111 -     65372 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attggctgaagttt-attctct--gggactcttcccaagcagaa-a-a--a
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41110 111 +     43593 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attggctgaagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669122 111 +   5030052 a-ttttag----tt-tt-----agtca---ATTCAA-TT--CACAATT-ATAATAT--TTC-ACCA--TAG--TT-TC-CTTAG---------TC--TTCTCTTT---------ATTGGCTGAAGTTT-ATTCTCT--GGGACTCTTCCCAAGTAGAA-A-A--A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20764 111 -     23494 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attggctgaagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                5900 111 +      8415 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attggctgaagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      12174 107 -     32367 g-ctttag----tt-tt-----aATCT---ACACTG--TTTCATAG---GT-----CTTTT-GCCT--TAG--TT-TC-CCTTG---------TC--TGCTCTTG---------GTTAGCCAAAGTTT-ATTTTCT--AGTACTTTCCCTAAGTATta-a-a--a
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 98 C 0
s Arctocebus_calabarensis.k141_1364444                       15972 106 -     45910 A-GTTTAG----AT-TT-----AGTCA---ATGCCG-TT--CACAGTC-TC-------CTT-GCCC--TAC--tt-tc-cccag---------cc--atcacatg---------gctgattgaagttc-actctct--agtacttatcccaagtagga-a-a--a
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   715  39 -     15198 ----------------------------------------------------------------------------------------------t--atatcttg---------gctg--------------tcct--agtagttttcccaagtggga-a-a---
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 47 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271350 111 +  21539123 a-ttttag----tt-tt-----agtca---actcaa-tt--cacaatt-ataatgt--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attgcctgaagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7521 111 +     48076 a-ttttag----tt-tt-----agtca---actcaa-tt--cacaatt-acaatgt--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attgcctgaagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2655 111 -     28759 a-ttttag----tt-tt-----agtca---actcaa-tt--cacaatt-acaatgt--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attgcctgaagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30207 111 +     44353 a-ttttag----tt-tt-----agtca---actcaa-tt--cacaatt-ataatgc--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attgcctgaagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45582 111 -     71267 a-ttttag----tt-tt-----agtca---actcaa-tt--cacaatt-acaatgt--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attgcctgaagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19638 111 -     33135 a-ttttag----tt-tt-----agtca---actcaa-tt--cacaatt-acaatgt--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attgcctgaagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2755 107 +     11645 g-ttttag----tt-tt-----agtca---atgccattt--cacaatt-ct-------ttt-gcca--cag--tt-tc-cctgg---------tc--atcacttg---------gttggttgaagttc-attcact--agtacttttcccaagtagga-a-a--a
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2757 107 -     19611 g-ttttag----tt-tt-----agtca---atgccattt--cacaatt-ct-------ttt-gcca--cag--tt-tc-cctgg---------tc--atcacttg---------gttggttaaagttc-attcact--agtacttttcccaagtagga-a-a--a
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4542 111 +     28062 a-tttttg----tt-tt-----agtca---attcaa-tt--cacaatt-atagtat--ttc-acca--tag--tt-tc-cttag---------tc--atctcttc---------attggctgaagttt-attctct--gggactcttcccaagtagaa-a-c--a
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39836 111 -     91139 a-tttttg----tt-tt-----agtca---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttag---------tc--atctcttc---------attggctgaagttt-attctct--gggactcttcccaagtagaa-a-c--a
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17362 111 +     95584 a-tttttg----tt-tt-----agtca---attcaa-tt--cacaatt-atagtat--ttc-acca--tag--tt-tc-cttag---------tc--atctcttc---------attggctgaagttt-attctct--gggactcttcccaagtagaa-a-c--a
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17275 111 +    119600 a-tttttg----tt-tt-----agtca---attcaa-tt--cacaatt-atagtat--ttc-acca--tag--tt-tc-cttag---------tc--atctcttc---------attggctgaagttt-attctct--gggactcttcccaagtagaa-a-c--a
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6780 111 +     18648 a-ttttag----tt-tt-----agtca---attcga-tt--cacaata-ataagat--ttc-acca--tag--tt-tc-cttaa---------tc--atctcttt---------attggctgaag-tttattctct--gggactcttcccaagtagac-a-a--a
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6456 111 -     13885 a-tttgag----ct-tt-----agtca---attcaa-tt--cacaatt-atattat--ttc-acca--tag--tc-tt-cttag---------tc--atctcttt---------attggctgaag-cttattctct--gggactcttcccaagtagac-a-a--a
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15142 111 +     17162 a-ttttag----tt-tt-----agtca---attcga-tt--cacaata-ataatat--ttc-acca--tag--tt-tc-cttaa---------tc--atctcttt---------attggctgaag-tttattctct--gggactcttcccaagtagac-a-a--a
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450098 111 + 189096842 A-TTTTAG----TT-TT-----AGTCA---ATTCGA-TT--CACAATA-ATAATAT--TTC-ACCA--TAG--TT-TC-CTTAA---------TC--ATCTCTTT---------ATTGGCTGAAG-TTTATTCTCT--GGGACTCTTCCCAAGTAGAC-A-A--A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16391 111 -     18408 a-ttttag----tt-tt-----agtca---attcga-tt--cacaata-ataatat--ttc-acca--tag--tt-tc-cttaa---------tc--atctcttt---------attggctgaag-tttattctct--gggactcttcccaagtagac-a-a--a
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42501645   1 +  60362399 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5275   1 -     23171 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218636   1 +   9314153 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41611761   1 +  59632846 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45103331   1 -  63665305 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267208  76 +    496798 -----------------------------------------------T-CT-------TTT-GCCA--TGG--TT-TC-TCTGG---------TC--ATCTCTTG---------ATTGGCTAAAGTTT-ATGTTCT--AGAATGTTTcccaagtagaa-a-a--a
i Carlito_syrichta.NW_007259797.1                        I 18 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                761  52 +      5315 ----------------------------------------------------------------------------------------------t--gtctcttg---------gctggctgaagttc-attgcct--agtagttttcccaagtggga-a-a---
i Carollia_perspicillata.CarPer_scaffold_170178          I 47 C 0
s Cebuella_niveiventris.k141_592277                           1676 111 -     12580 a-ttttag----tt-tt-----agtca---attcga-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttaa---------tc--atctcttt---------attggttgaag-tttattctct--gggactcttcccaagtagac-a-a--a
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39562 111 +     53515 a-ttttag----tt-tt-----agtca---attcga-tt--cacaata-ataatat--ttc-acca--tag--tt-tc-cttaa---------tc--atctcttt---------attggctgaag-tttattctct--gggactcttcccaagtagac-a-a--a
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367754 111 -  26074798 a-ttttag----tt-tt-----agtca---attcag-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-tttag---------tc--atctcttt---------attggctgaagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4643 111 -     34880 a-ttttag----tt-tt-----agtca---attcag-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-tttag---------tc--atctcttt---------attggctgaagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63738 111 -     89041 a-ttttag----tt-tt-----agtca---attcag-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-tttag---------tc--atctcttt---------attggctgaagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            373  76 -      1636 -----------------------------------------------t-ct-------ttt-gcca--tgg--tt-tc-tctgg---------tc--atctcttg---------attggctaaagttt-atgttct--agaatgtttcccaagtagga-a-a--a
i Cephalopachus_bancanus.k141_72622                      I 18 C 0
s Ceratotherium_simum.JH767749.1                          15488817  53 -  27778364 ----------------------------------------------------------------------------------------------t--atcatttg---------gttggctgaagttc-attctct--agtagttttcccatgaaggaaa-a---
i Ceratotherium_simum.JH767749.1                         I 43 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15650  53 +     27315 ----------------------------------------------------------------------------------------------t--atcatttg---------gttggctgaagttc-attctct--agtagttttcccatgaaggaaa-a---
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 43 C 0
s Cercocebus_atys.KQ010504.1                                137270 111 -   4669795 a-ttttag----tt-tt-----agtca---ATGCAA-TT--CACAATT-ATAATAG--TCC-ATCA--TAG--TT-TC-CTTAG---------TT--ATCTCTTT---------GTTGGCTAAAGTTT-GTTCTCT--GGGGTTTTACCCAAGTAGGA-A-A--A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41011 111 +     47900 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40843 111 -     44860 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40825 111 -    148725 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23884 111 -     40656 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--gggttttttcccaagtagga-a-g--a
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3819 111 +     20796 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--gggttttttcccaagtagga-a-g--a
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8074 111 -     17524 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--gggttttttcccaagtagga-a-g--a
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23763 111 -     34525 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tcg--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--gggttttttcccaagtagga-a-g--a
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8474 111 -     25376 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--ggggtttttcccaagtagga-a-g--a
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361039 111 -  39242232 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--gggttttttcccaagtagga-a-g--a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266785 110 +  21565898 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--ggg-tttttcccaagtagga-a-g--a
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28237 111 -     45857 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--gggttttttcccaagtagga-a-g--a
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24028 111 -     32606 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--gggttttttcccaagtagga-a-g--a
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          215 111 +      8499 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--ggggtttttcccaagtagga-a-g--a
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21727 111 +     70610 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--ggggtttttcccaagtagga-a-g--a
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18592 111 +     36323 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--gggttttttcccaagtagga-a-g--a
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9581  72 -     19938 -----------------------------------------------------------tt-ttct--tat--ctt-c-tctag---------cc--atcttttg---------gtcagctgaagttc-attttct--aatagttctcccacaaataa-g-a--a
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 35 C 0
s Cheirogaleus_major.k141_666340                             27173 107 -     33796 a-ttttag----tt-tt-----agtga---atgcccttt--cccagtt-ct-------ttt-gcca--cag--tt-tc-cctag---------tc--atcacttg---------gttggttgaagttc-actctct--agtacttttcccaagcagga-a-a--t
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1368 107 -     15404 a-ttttag----tt-tt-----agtca---atgcccttt--cccagtt-ct-------ttt-gccg--cag--tt-tc-cctag---------tc--atcacttg---------gttggttgaagttc-actctct--agtacttttcccaagcagga-a-a--a
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5635 111 -     32913 a-ttttag----tt-tt-----cgttg---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttgg---------tc--atctcttg---------attggctgaagttt-attctct--gggaatcttcccaagtagaa-a-a--a
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16048 111 -     40346 a-ttttag----tt-tt-----cgttg---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttgg---------tc--atctcttg---------attggctgaagttt-attctct--gggaatcttcccaagtagaa-a-a--a
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16312 111 +    216457 a-ttttag----tt-tt-----cgttg---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttgg---------tc--atctcttg---------attggctgaagttt-attctct--gggaatcttcccaagtagaa-a-a--a
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16091 111 +     39636 a-ttttag----tt-tt-----cgttg---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttgg---------tc--atctcttg---------attggctgaagttt-attctct--gggaatcttcccaagtagaa-a-a--a
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            530  75 +      5346 a-ttttag----tt-tt-----ggtca---attcaa-tt--cacaata-ataatat--ctc-accg--tag--tt-tc-cctag---------tc--atctcttt---------attggctg-------------------------------------------
i Chiropotes_albinasus.k141_1946120                      C 0 I 22
s Chiropotes_israelita.k141_313004                           39183 111 -    112038 a-tttttg----tt-tt-----agtca---attcaa-tt--cacaatt-atgatat--ttc-acca--tag--tt-tc-cttag---------tc--atctcttc---------attggctgaagttt-attctct--gggactcttcccaagtagaa-a-c--a
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4755 111 +     34062 a-tttttg----tt-tt-----agtca---attcaa-tt--cacaatt-atgatat--ttc-acca--tag--tt-tc-cttag---------tc--atctcttc---------attggctgaagttt-attctct--gggactcttcccaagtagaa-a-c--a
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339488 111 +  18827391 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gtaggctaaagttt-gttctct--ggggtttttcccaagtagga-a-g--a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6099 111 -     44032 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatg-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gtaggctaaagttt-gttctct--gggttttttcccaagtagga-a-g--a
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300814 111 - 135778131 a-ttttag----tt-tt-----agtca---ATGCAA-TT--CACAATT-ATAATAG--TCC-ATCA--TAG--TT-TC-CTTTG---------TT--ATCTATTT---------GTAGGCTAAAGTTT-GTTCTCT--GGGGTTTTTCCCAAGTAGGA-A-G--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405363 111 -   2368649 a-ttttag----tt-tt-----agtca---ATGCAA-TC--CACAATT-ATAATAG--TCC-ATCA--TAG--TT-TC-CTTAG---------TT--ATCTATTT---------GTTGGCTAAAGTTT-GTTCTCT--GGGGTTTTTCCCAAGTAGGA-A-A--A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374522 111 - 200372422 a-ttttag----tt-tt-----agtca---atgcaa-tc--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctattt---------gttggctaaagttt-gttctct--ggggtttttcccaagtagga-a-a--a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5247 111 -      6605 a-ttttag----tt-tt-----agtca---atgcaa-tc--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctattt---------gttggctaaagttt-gttctct--ggggtttttcccaagtagga-a-a--a
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803706  63 +  53390261 -----------------------------------------------------------------------------------GCTTTT-TTCCCCTGtctcttg---------actgg-taaaattc-attccct--agtcgtttcctcaagaa-ca-a-a--t
i Condylura_cristata.JH655891.1                          I 18 I 7
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9113  53 +     10921 ----------------------------------------------------------------------------------------------t--actccttg---------gctggctaaagttc-tttccct--agtagttatcccaagaagga-aaa---
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 33 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               553   1 +     87169 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2105784  72 -   2246927 -----------------------------------------------------------tt-gtct--tac--ttt-c-tctag---------cc--atcttttc---------atcagctgaagtac-attttct--aatagttcacccaagaaaaa-g-a--a
i Dasypus_novemcinctus.JH564415.1                        I 32 C 0
s Daubentonia_madagascariensis.ctg71                        289205 107 +  12879189 a-ttttag----tt-tt-----agtcg---atgccattt--cacagtt-ct-------ttt-gcta--tag--tt-tc-cctac---------tc--accagttg---------gttggttgaagttc-actctct--agtgcttttcccaagtagga-a-a--a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661104  53 -   1390856 ----------------------------------------------------------------------------------------------t--atcatttg---------gttggctgaagttc-attctct--agtagttttctcatgaaggaaa-a---
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 43 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135893  53 -    198055 ----------------------------------------------------------------------------------------------t--atcatttg---------gttggctgaagttc-attctct--agtagttttcccatgaaggaaa-a---
i Diceros_bicornis.DicBicMic_scaffold_5955               I 43 C 0
s Eidolon_helvum.AWHC01266696.1                               2448  52 +     19438 ----------------------------------------------------------------------------------------------c--atctctta---------gctagctgaaattc-attccct--agtagttttcccaggaagga-a-a---
i Eidolon_helvum.AWHC01266696.1                          I 42 C 0
s Eptesicus_fuscus.JH977646.1                             12574031  52 +  14770903 ----------------------------------------------------------------------------------------------c--agctcttg---------gctgactgaagttt-ataccct--cgtaattttcccaagaagga-a-a---
i Eptesicus_fuscus.JH977646.1                            I 43 I 33
s Equus_asinus.JREZ01000139.1                              3038074  53 -   4378816 ----------------------------------------------------------------------------------------------c--attgcttg---------gttggctgaagttc-atttcct--agtagatttcccacaaaggaag-a---
i Equus_asinus.JREZ01000139.1                            I 43 C 0
s Equus_caballus.CM000403.2                               21372008  53 +  39960074 ----------------------------------------------------------------------------------------------c--attgcttg---------gttggctgaagttc-atttcct--agtagatttcccacaaaggaag-a---
i Equus_caballus.CM000403.2                              I 43 C 0
s Equus_przewalskii.KK951119.1                              408794  53 -    498745 ----------------------------------------------------------------------------------------------c--attgcttg---------gttggctgaagttc-atttcct--agtagatttcccacaaaggaag-a---
i Equus_przewalskii.KK951119.1                           I 43 C 0
s Erythrocebus_patas.Contig38                               259046 111 +  21539334 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--gggttttttcccaagtagga-a-g--a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12169 107 -     24895 a-ttttac----tt-tt-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cag--tt-tc-cccag---------tc--atcacttg---------attggttgaggttc-attcgct--agtacttttcccaagcagta-g-a--a
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39881 107 -     70999 a-ttttac----tt-tt-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cag--tt-tc-cccag---------tc--atcacttg---------tttggttgaggttc-atttgct--agtacttttcccaagaagta-a-a--a
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83841 107 +    112731 a-ttttac----tt-tt-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cag--tt-tc-cccag---------tc--atcacttg---------tttggttgaggttc-atttgct--agtacttttctcaagaagta-a-a--a
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40413 107 +     68309 a-ttttac----tt-tt-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cgg--tt-tc-cccag---------tc--atcacttg---------tttggttgaggttc-atttgct--agtacttttcccaagaagta-a-a--a
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50738 107 -     65740 a-ttttac----tt-tt-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cag--tt-tc-cccag---------tc--atcacttg---------attggttgaggttc-attcgct--agtacttttcccaagcagta-g-a--a
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21368 107 -     75513 a-ttttac----tt-tt-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cag--tt-tc-cccag---------tc--atcacttg---------tttggttgaggttc-atttgct--agtacttttcccaagaagta-a-a--a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45561 107 -     97555 a-ttttac----tt-tt-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cag--tt-tc-cccag---------tc--atcacttg---------tttggttgaggttc-atttgct--agtacttttcccaagaagta-a-a--a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2288 107 +     30972 a-ttttac----tt-tt-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cag--tt-tc-cccag---------tc--atcacttg---------attggttgaggttc-attcgct--agtacttttcccaagcagta-a-a--a
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40011 107 -     52037 a-ttttac----tt-tt-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cag--tt-tc-cccag---------tc--atcacttg---------tttggttgaggttc-atttgct--agtacttttcccaagaagta-a-a--a
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56412 107 -    111500 a-ttttac----tt-tt-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cag--tt-tc-cccag---------tc--atcacttg---------attggttgaggttc-attcgct--agtacttttcccaagcagta-g-a--a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242974   1 - 206538554 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112756   1 - 205367284 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24104   1 -     30238 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     119574 103 -    137831 A-GTTTAG----TT-TT-----ACTAA---ATGCTG-TT----CACTC-CC-------C-T-GCCC--TAG--TT-TT-TCTAG---------CC--ATCACTTG---------GCTGATTGAAGTGC-ACTCT--CTAGTACTTATCCCAAGTAGGA-A-A--A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3114 103 +     22493 A-GTTTAG----TT-TT-----ACTAA---ATGCTG-TT----CACTC-CC-------C-T-GCCC--TAG--TT-TT-TCTAG---------CC--ATCACTTG---------GCTGATTGAAGTGC-ACTCT--CTAGTACTTATCCCAAGTAGGA-A-A--A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16581 104 +     32986 A-GTTTAG----TT-TC-----AGTAA---ATGCCA-TT----CACTC-CC-------CTT-GCCC--TAG--TT-TT-TCTAG---------CC--ATCACTTG---------GCTGATTGAAGTGC-ACTCT--CTAGTACTTATCCTAAGTAGGA-A-A--A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               3520  56 +      5976 ----------------------------------------------------------------------------------AG---------tc--atctcttg---------gttcgctgaagttc-attttct--agtacttttcccaaacagga-g-a--a
i Galeopterus_variegatus.GalVar_scaffold_132127          I 119 C 0
s Gorilla_beringei.k141_3358147                               1168 113 -      8343 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatat--ttc-acca--tagtttt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggacttttcccaagtagga-a-a--a
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250668 113 - 186649187 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatat--ttc-acca--tagtttt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggacttttcccaagtagga-a-a--a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12109  96 -     40692 -----------------------gtca---atgccattt--cacagtt-ct-------ttttgcca--cag--tt-tc-cccag---------tc--accacttg---------attggttgaggttc-attcgct--agtacttttcccaagcacta-a-a--a
i Hapalemur_alaotrensis.k141_330369                      I 6 C 0
s Hapalemur_gilberti.k141_646465                             33511  96 +     49394 -----------------------gtca---atgccattt--cacagtt-ct-------ttttgcca--cag--tt-tc-cccag---------tc--accacttg---------attggttgaggttc-attcgct--agtacttttcccaagcacta-a-a--a
i Hapalemur_gilberti.k141_646465                         I 6 C 0
s Hapalemur_griseus.k141_763500                              58379  96 -     66874 -----------------------gtca---atgccattt--cacagtt-ct-------ttttgcca--cag--tt-tc-cccag---------tc--accacttg---------attggttgaggttc-attcgct--agtacttttcccaagcacta-a-a--a
i Hapalemur_griseus.k141_763500                          I 6 C 0
s Hapalemur_meridionalis.k141_258450                          7256  96 -     42923 -----------------------gtca---atgccattt--cacagtt-ct-------ttttgcca--cag--tt-tc-cccag---------tc--accacttg---------attggttgaggttc-attcgct--agtacttttcccaagcacta-a-a--a
i Hapalemur_meridionalis.k141_258450                     I 6 C 0
s Hapalemur_occidentalis.k141_578367                         14252  96 -     53142 -----------------------gtca---atgccattt--cacagtt-ct-------ttttgcca--cag--tt-tc-cccag---------tc--accacttg---------attggttgaggttc-attcgct--agtacttttcccaagcacta-a-a--a
i Hapalemur_occidentalis.k141_578367                     I 6 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26869   1 -    327341 -----------------------------------------------------------------------------------------------------------------------------------------------------------------A---
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546348  52 -   1711038 ----------------------------------------------------------------------------------------------c--acctcttg---------gctggcctgagttg-attccct--agtagttttcccaagaagga-a-a---
i Hipposideros_armiger.JXIK01000431.1                    I 37 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45666  52 +     49977 ----------------------------------------------------------------------------------------------c--acctcttg---------gctggcctgagttg-tttccct--agtagttttcccaagaagga-a-a---
i Hipposideros_galeritus.HipGal_scaffold_23202           I 41 C 0
s Hoolock_leuconedys.ctg274                                    138564 111 -    630532 a-ttttag----tt-tt-----actca---atgcaa-tt--cacaatt-ataatat--ttc-agca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggacttttcccaagtagga-a-a--a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65547   1 +     83186 -----------------------------------------------------------------------------------------------------------------------------------------------------------------A---
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               1597 111 +     12352 a-ttttag----tt-tt-----actca---atgcaa-tt--cacaatt-ataatat--ttc-agca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggacttttcccaagtagga-a-a--a
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8780 111 +     55766 a-ttttag----tt-tt-----actca---atgcaa-tt--cacaatt-ataatat--ttc-agca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggacttttcccaagtagga-a-a--a
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048119 111 + 191637585 a-ttttag----tt-tt-----actca---atgcaa-tt--cacaatt-ataatat--ttc-agca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggacttttcccaagtagga-a-a--a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797451 111 +  11177569 a-ttttag----tt-tt-----actca---atgcaa-tt--cacaatt-ataatat--ttc-agca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggacttttcccaagtagga-a-a--a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375460 107 +   7955117 a-ttttag----tt-tt-----agtct---atactg--t-ttct--tg-tt-----ctttt-gc--cctag--t-ttc-cctta---------tc--tgctcttg---------gttaggcaaagttt-attttct--agtactttccctaagtagga-aaa--a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                     244 107 -      1527 a-ttttag----tt-tt-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cag--tt-tc-cctgg---------tc--attacttg---------gttggttgaagttc-ttttgct--agtacttttcccaagtagga-a-a--a
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          39897 111 +    110728 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaatt-ataatgt--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attgcctgaagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14756901  95 +  30322482 -----------------------gtca---atgccattt--cacagtt-ct-------ttt-gcca--cag--tt-tc-cccag---------tc--accacttg---------attggttgaggttc-attcact--agtacttttcccaagcacta-a-a--a
i Lemur_catta.scaffold_24                                I 6 C 0
s Leontocebus_fuscicollis.k141_2994775                         598 110 -     13097 a-ttctag----tt-tt-----agtca---attcaa-tt--cacaata-ataatat--ctc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attggctgaag-tt-attccct--gggactctttccaagtagac-a-a--a
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            549 110 +      5940 a-ttctag----tt-tt-----agtca---attcaa-tt--cacaata-ataatat--ctc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attggctgaag-tt-attccct--gggactctttccaagtagac-a-a--a
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         180 110 -      5717 a-ttttag----tt-tt-----agtga---attcaa-tt--cacaata-ataatat--ctc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attggctgaag-tt-attccct--gggactctttccaagtagac-a-a--a
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6804 110 -     11567 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaata-ataatat--ctc-acca--tag--tt-ac-cttag---------tc--atctcttt---------attggctgaag-tt-attctct--gggactcttcccaagtagac-a-a--a
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8185 110 -     12945 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaata-ataatat--ctc-acca--tag--tt-ac-cttag---------tc--atctcttt---------attggctgaag-tt-attctct--gggactcttcccaagtagac-a-a--a
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5538 107 +     29618 a-ttttag----ct-tc-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cgg--tt-tc-cctag---------tc--gtcacttg---------gttagttgaagttc-actctct--agtacttttcccaagcagga-a-a--a
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5535 107 +     31569 a-tcttag----ct-tc-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cgg--tt-tc-cctag---------tc--gtcacttc---------gttagttgaagttc-actctct--agtacttttcccaagcagga-a-a--a
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5545 107 +     24756 a-ttttag----ct-tc-----agtca---atgccattt--cacaatt-ct-------ttt-gcca--cgg--tt-tc-cctag---------tc--gtcacttg---------gttagttgaagttc-actctct--agtactttacccaagcagga-a-a--a
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5540 107 +     16388 a-ttttag----ct-tc-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cgg--tt-tc-cctag---------tt--gtcacttg---------gttagttgaagttc-actctct--agtacttttcccaagcagga-a-a--a
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809767   1 -   3914936 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               329226 111 -   1826925 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2547  96 +     19643 a-gtttag----tt-tt-----agtca---atgcct-tt--cacagtc-cc-------ctt-gccc--tag--tt-tt-cctag---------cc--atcacttg---------gctgattgaagttc-actctct--agta----------gtagga-a-a--a
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036205  96 -   6120653 a-gtttag----tt-tt-----agtca---atgcct-gt--cacagtc-cc-------ctt-gccc--tag--tt-tc-cctag---------cc--atcacttg---------gctgattgaagttc-actctct--agta----------gtagga-a-a--a
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41610916   1 +  59628241 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Lycaon_pictus.CM007581.1                               I 9 C 0
s Macaca_arctoides.k141_1757516                              41506 111 -     61512 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369134 111 -  60120075 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21454 111 +     30207 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tct-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18557 111 -     24934 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tct-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21341 111 +     30527 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tct-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32530 111 -     50087 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42268 111 +     51645 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttatccaagtagga-a-a--a
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410842 111 - 187317192 a-ttttag----tt-tt-----agtca---ATGCAA-TT--CACAATT-ATAATAG--TCT-ATCA--TAG--TT-TC-CTTAG---------TT--ATCTCTTT---------GTTGGCTAAAGTTT-GTTCTCT--GGGGTTTTACCCAAGTAGGA-A-A--A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395725 111 +  25927173 a-ttttag----tt-tt-----agtca---ATGCAA-TT--CACAATT-ATAATAG--TCC-ATCA--TAG--TT-TC-CTTAG---------TT--ATCTCTTT---------GTTGGCTAAAGTTT-GTTCTCT--GGGGTTTTACCCAAGTAGGA-A-A--A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44857 111 -     62418 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttatccaagtagga-a-a--a
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21544 111 +     24253 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41301 111 +     59329 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267133 111 +    668171 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18479 111 +     21031 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32211 111 +     33478 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219503  52 -    270270 ----------------------------------------------------------------------------------------------c--atctctta---------gctagctgaaattc-attccct--agtagtttttccaggaaaga-a-a---
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 42 C 0
s Mandrillus_leucophaeus.scaffold280                        318609 111 +  24302211 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353441 111 -    752769 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670205   1 -    737560 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217499   1 +    317179 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7489553 106 +  40650429 a-ttttag----tt-tt-----agtct---atgctg--t-ttct--tg-tt-----ctttt-gc--tatag--t-ttc-cctta---------tc--tgctcttg---------gttaggcaaagttt-attttcc--agtactttccctaagtagga-a-a--a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146585  52 +    207569 ----------------------------------------------------------------------------------------------c--atctcttg---------gctgactgaagtcc-agtccct--agtgcttttcccaaaaagga-a-a---
i Megaderma_lyra.MegLyr_scaffold_4542                    I 39 C 0
s Mico_argentatus.k141_582562                                 6564 111 +     17804 a-ttttag----tt-tt-----agtca---attcga-tt--cacaata-ataatat--ttc-acca--tag--tt-tc-cttaa---------tc--atctcttt---------attggctgaag-tgtattctct--gggactcttccaaagtagac-a-a--a
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7337 111 -     12984 a-ttttag----tt-tt-----agtca---attcga-tt--cacaata-ataatat--ttc-acca--tag--tt-tc-cttaa---------tc--atctcttt---------attggctgaag-tttattctct--gggactcttcccaagtagac-a-a--a
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15299 111 -     26561 a-ttttag----tt-tt-----agtca---attcga-tt--cacaata-ataatat--ttc-acca--tag--tt-tc-cttaa---------tc--atctcttt---------attggctgaag-tttattctct--gggactcttcccaagtagac-a-a--a
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981137 116 +  93316391 a-ttttag----tt-tt-----agtca---CTGCTATTT--CACAGTT-CT-------TTT-GTCA--CAG--CT-TC-TCTAG---------TC--ATTGCTGGTTGGTTGGAGTTGGTCGAAGTTC-ACTCTCT--AGTACTTTTCCCAAGCAGGA-A-A--A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180850  52 +    200668 ----------------------------------------------------------------------------------------------t--atctcttg---------gctggctgaagttc-attgcct--agtagttttctcaagcagga-a-a---
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 47 C 0
s Miopithecus_ogouensis.k141_1534655                         18599 111 -     27822 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-ctttg---------tt--atctattt---------gttggctaaagttt-gttctct--ggggtttttcccaagtagga-a-g--a
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4777   1 +     27589 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     48998 116 -     62432 a-ttttag----tt-tt-----agtca---ctgctattt--cacagtt-ct-------ttt-gtca--cag--ct-tc-tctag---------tc--atcactggttggttggagttggtcaaagttc-actctct--agtacttttcccaagaagga-a-a--a
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175025  52 +    366855 ----------------------------------------------------------------------------------------------t--atctcttg---------gctggccgaggtgc-gttccct--agtagttttcccaagaagga-a-g---
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 47 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14638   1 -     63510 -----------------------------------------------------------------------------------------------------------------------------------------------------------------A---
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          33951  45 +     47283 ----------------------------------------------------------------------------------------------c--aa----------------ctgactgaagttt-attccct--agtagttttcccaagaagga-a-a---
i Murina_feae.MurFea_scaffold_17764                      I 43 I 25
s Myotis_brandtii.KE162005.1                               9788384  52 +  10118263 ----------------------------------------------------------------------------------------------a--aactcttg---------gatgactgaagttt-ataccct--agtagttttcccaagaagga-a-a---
i Myotis_brandtii.KE162005.1                             I 43 I 33
s Myotis_davidii.KB100139.1                                4378796  52 +   6019432 ----------------------------------------------------------------------------------------------c--agctcttg---------gctgactgaagttt-ataccct--agtagttttcccaagaagga-a-a---
i Myotis_davidii.KB100139.1                              I 43 I 33
s Myotis_lucifugus.GL429869.1                               378615  52 +   4330536 ----------------------------------------------------------------------------------------------c--agttcttg---------gctgactgaaattt-ataccct--agtagttttcccaagaagga-a-a---
i Myotis_lucifugus.GL429869.1                            I 43 I 33
s Myotis_myotis.MyoMyo_scaffold_185951                        2335  52 +      3929 ----------------------------------------------------------------------------------------------c--agctcttg---------gctgactgaagttt-ataccct--agtagttttcccaaggagaa-a-a---
i Myotis_myotis.MyoMyo_scaffold_185951                   I 43 I 33
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116346  71 +    130748 -----------------------------------------------------------CT-GTCT--TAt--tt--t-tctac---------tc--atcttttg---------gtcagtggaagttc-atcctct--aatagttaccccaggaaaga-g-a--a
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 29 C 0
s Nasalis_larvatus.k141_1350636                              24901 111 +     34575 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465162   1 -  31847680 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   123227  52 -    149072 ----------------------------------------------------------------------------------------------t--atctcttg---------gctggtggaagttc-attccct--agtagttttcccgagaagga-a-a---
i Noctilio_leporinus.NocLep_scaffold_7894                I 47 C 0
s Nomascus_annamensis.k141_1771965                           49849 111 -    132029 a-ttttag----tt-tt-----actca---atgcaa-tt--cacaatt-ataatat--ttc-agca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggacttttcccaagtagga-a-a--a
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               5945 111 -     16345 a-ttttag----tt-tt-----actca---atgcaa-tt--cacaatt-ataatat--ttc-agca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggacttttcccaagtagga-a-a--a
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11828 111 +     22201 a-ttttag----tt-tt-----actca---atgcaa-tt--cacaatt-ataatat--ttc-agca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggacttttcccaagtagga-a-a--a
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410165 111 -  22158432 a-ttttag----tt-tt-----actca---atgcaa-tt--cacaatt-ataatat--ttc-agca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggacttttcccaagtagga-a-a--a
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22228 111 -     54323 a-ttttag----tt-tt-----actca---atgcaa-tt--cacaatt-ataatat--ttc-agca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggacttttcccaagtagga-a-a--a
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194531   1 +   9404916 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93631322  95 + 196305487 a-gtttag----tt-t------aatca---atgcct-tt--cacagtc-cc-------ttt-gccc--tag--tt-tc-cctag---------cc--atcacttg---------gctgattgaagttc-actctct--agta----------gtagga-a-a--a
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              711  95 +      2758 a-gtttag----tt-t------aatca---atgcct-tt--cacagtc-cc-------ttt-gccc--tag--tt-tc-cctag---------cc--atcacttg---------gctgattgaagttc-actctct--agta----------gtagga-a-a--a
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1447942   1 +   2017862 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35594   1 +    559221 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559601  70 - 199412804 a-gtttag----tt-t------aatca---atgcct-tt--cacagtc-cc-------ttt-gccc--tag--tt-tc-cctag---------cc--atcacttg---------gctgattga------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 13
s Otolemur_crassicaudatus.k141_85057                         22850 101 -     23432 A-GTTTAG----TT-TT-----ACTAA---ATGCCG-TT----CACTC-CC-------C-T-GCCC--GAG--TT-TT-TCTAG---------CC--ATCACTTG---------GCTGATTGAAGTGC-ACTCT----AGTACTTATCCCAAGTAGGA-A-A--A
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347415 101 +   1103335 A-GTTTAG----TT-TT-----ACTAA---ATGCCG-TT----CACTC-CC-------C-T-GCCC--TAG--TT-TT-TCTAG---------CC--ATCACTTG---------GCTGATTGAAGTGC-ACTCT----AGTACTTATCCCAAGTAGGA-A-A--A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468057 113 - 189151597 a-ttttag----tt-tt-----agtca---ATGCAA-TT--CACAATT-ATAATAT--TTC-ACCA--TAGTTTT-TC-CTTAG---------TT--ATCTCTTT---------GTTGGCTAAAGTTT-GTTCTCT--GGGACTTTTCCCAAGTAGGA-A-A--A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20692   1 -    230217 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18458018   1 -  18783137 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968744   1 +   8748460 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   239453 111 - 183742232 a-ttttag----tt-tt-----agtca---ATGCAA-TT--CACAATT-GTAATAG--TCC-ATCA--TAG--TT-TC-CTTAG---------TT--ATCTCTTT---------GTTGGCTAAAGTTT-GTTCTCT--GGGGTTTTACCCAAGTAGGA-A-A--A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             5920 111 +     21308 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-gtaatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  286957 111 -  20919399 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-gtaatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18573 111 -     27687 a-ttttag----tt-tt-----agtca---atgcag-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11709 111 +     16796 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-gtaatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18519 111 -     23640 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-gtaatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--ggggttttacccaagtagga-a-a--a
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11621   1 +     78924 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21414 106 +     31479 a-gttcag----at-tt-----agtca---atgccg-tt--cacagtc-tc-------ctt-gccc--tac--tt-tc-cccag---------cc--atcacatg---------gctgattgaagttc-actctct--agtacttatcccaagtagga-a-a--a
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13785 106 -     24908 a-gttcag----at-tt-----agtca---atgccg-tt--cacagtc-tc-------ctt-gccc--tac--tt-tc-cccag---------cc--atcacatg---------gctgattgaagttc-actctct--agtacttatcccaagtagga-a-a--a
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5355 111 +      7560 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-gtca--tag--tt-tc-tttag---------tt--atctcttg---------gttggctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61062 111 -     63152 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-gtaatag--tcc-gtca--tag--tt-tc-tttag---------tt--atctcttg---------gttggctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43661 111 +     45295 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-gtaatag--tcc-gtca--tag--tt-tc-tttag---------tt--atctcttg---------gttggctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1340 111 +      5735 a-ttttag----tt-tt-----agtca---ATGCAA-TT--CACAATT-ATAATAG--TCC-GTCA--TAG--TT-TC-TTTAG---------TT--ATCTCTTG---------GTTGGCTAAAGTTT-GTTCTCT--GGGATTTTTCCCAAGTAGGA-A-A--A
i Piliocolobus_tephrosceles.PDMG02034973.1               I 55 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46225  52 +     46691 ----------------------------------------------------------------------------------------------c--agctcttg---------gctgactgaagtta-ataccct--tgtaattttcccaagaaggA-A-A---
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        I 43 I 8
s Pithecia_albicans.k141_1239476                             61533 111 +    207309 a-tttttg----ct-tt-----agtca---attcaa-tt--cacaatt-ataatat--ttc-accg--tag--tt-tc-cttag---------tc--atctcttt---------attggctgaagttt-attctct--gggacgcttcccaaggagaa-a-a--a
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2653 111 -     25401 a-tttttg----ct-tt-----agtca---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attggctgaagttt-attctct--gggatgcttcccaaggagaa-a-a--a
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28368 111 +     58159 a-tttttg----ct-tt-----agtca---attcaa-tt--cacaatt-ataatat--ttc-accg--tag--tt-tc-cttag---------tc--atctcttt---------attggctgaagttt-attctct--gggacgcttcccaaggagaa-a-a--a
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28644 111 +     63561 a-tttttg----ct-tt-----agtca---attcaa-tt--cacaatt-ataatat--ttc-accg--tag--tt-tc-cttag---------tc--atctcttt---------attggctgaagttt-attctct--gggacgcttcccaaggagaa-a-a--a
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28407 111 +     51148 a-tttttg----ct-tt-----agtca---attcaa-tt--cacaatt-ataatat--ttc-accg--tag--tt-tc-cttag---------tc--atctcttt---------attggctgaagttt-attctct--gggacgcttcccaaggagaa-a-a--a
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553400 111 -   4542175 a-tttttg----ct-tt-----agtca---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttag---------tc--atctcttt---------attggctgaagttt-attctct--gggacgcttcccaaggagaa-a-a--a
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28391 111 +     51125 a-tttttg----ct-tt-----agtca---attcaa-tt--cacaatt-ataatat--ttc-accg--tag--tt-tc-cttag---------tc--atctcttt---------attggctgaagttt-attctct--gggacgcttcccaaggagaa-a-a--a
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4809 111 +     39866 a-ttttag----tt-tt-----cgtcg---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttgg---------tc--atctcttg---------atgggctgaagttt-attctct--gggactcttcccaagcagaa-a-a--a
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                             0   7 -      9282 ----------------------------------------------------------------------------------------------------------------------------------------------------------Agaa-a-a--a
i Plecturocebus_brunneus.k141_862875                     N 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39297 111 -     87950 a-ttttag----tt-tt-----cgtcg---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttgg---------tc--atctcttg---------atggtctggagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39690 111 -     88961 a-ttttag----tt-tt-----cgtcg---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttgg---------tc--atctcttg---------atggtctggagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4389 111 -     39403 a-ttttag----tt-tt-----cgtcg---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttgg---------tc--atctcttg---------atggtctggagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39343 111 +     87928 a-ttttag----tt-tt-----cgtcg---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttgg---------tc--atctcttg---------atggtctggagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4387 111 -     60166 a-ttttag----tt-tt-----cgtcg---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttgg---------tc--atctcttg---------atgggctgaagttt-attctct--gggactcttcccaagcagaa-a-a--a
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11323 111 -     67232 a-ttttag----tt-tt-----cgtcg---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttgg---------tc--atctcttg---------atgggctaaagttt-attctct--gggactcttcccaagcagaa-a-a--a
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39239 111 -     90634 a-ttttag----tt-tt-----cgtcg---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttgg---------tc--atctcttg---------atgggctgaagttt-attctct--gggactcttcccaagcagaa-a-a--a
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40707 111 +     89403 a-ttttag----tt-tt-----cgtcg---attcaa-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-cttgg---------tc--atctcttg---------atgggctgaagttt-attctct--gggactcttcccaagcagaa-a-a--a
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173674 113 - 189387572 a-ttttag----tt-tt-----agtca---ATGCAA-TT--CACAATT-ATAATAT--TTC-ACCA--TAGTTTT-TC-CTTAG---------TT--ATCTCTTT---------GTTGGCTAAAGTTT-GTTCTCT--GGGACTTTTCCCAAGTAGGA-A-A--A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188672 113 -   9816681 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatat--ttc-acca--tagtttt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggacttttcccaagtagga-a-a--a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23838 111 +     69807 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41033 111 -     80239 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980059  93 +   4620579 -----------------------GTCA---ATGCCATTT--CACAGTT-CT-------TTT-GCCA----G--TT-TC-CCCAG---------TC--ACCACTTG---------ATTGGTTGAGGTTC-ATTCGCT--AGTACTTTTCCCAAGCACTA-A-A--A
i Prolemur_simus.MPIZ01000396.1                          I 6 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562624 107 -   2598838 a-ttttag----tt-tt-----agtcA---ATGCCATTT--CACAGTT-CT-------TTT-GCCA--CAG--TT-TC-CCTGG---------TC--ATCACTTG---------GTTGGTTGAAGTTC-ATTCGCT--AGTACTTTTCCCAAGTAGGA-A-A--A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            270 109 -      7103 a-ttttag----tt-tt-----agtca---atgccatct--cacagtt-ct-------ttt-gcca--cag--tt-tc-cctgg---------tc--atcacttg---------gttggttgaagttc-attcact--agtacttttcccaagtagga-a-aaaa
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                              866 107 -     11706 a-ttttag----tt-tt-----agtca---atgctattt--cacagtt-ct-------ttt-gcca--cag--tt-tc-cctgg---------tc--atcacttg---------gttggttgaagttc-attcgct--agtacttttcccaagtagga-a-a--a
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4601 107 -     30655 a-ttttag----tt-tt-----agtca---atgccatct--cacagtt-ct-------ttt-gcca--cag--tt-tc-cctgg---------tc--atcacttg---------gttggttgaagttc-attcgct--agtacttttcccaagtagga-a-a--a
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          30926 107 +     46564 a-ttttag----tt-tt-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cag--tt-tc-cctgg---------tc--atcacttg---------gttggttgaagttc-attcgct--agtacttttcccaagtagga-a-a--a
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91217 107 -     98465 a-ttttag----tt-tt-----agtca---atgccattt--cacagtt-ct-------ttt-gcca--cag--tt-tc-cctgg---------tc--atcacttg---------gttggttgaagttc-attcgct--agtacttttcccaagtagga-a-a--a
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4839 109 +     35169 a-ttttag----tt-tt-----agtca---atgccatct--cacagtt-ct-------ttt-gcca--cag--tt-tc-cctgg---------tc--atcacttg---------gttggttgaagttc-attcact--agtacttttcccaagtagga-a-aaaa
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48087  52 -     66298 ----------------------------------------------------------------------------------------------t--atctctca---------gctggctgaagttc-atttcct--agtagttttcccaagaggga-a-a---
i Pteronotus_parnellii.KE847780.1                        I 47 C 0
s Pteropus_alecto.KB030862.1                               5837006  52 -  28871421 ----------------------------------------------------------------------------------------------c--atctctta---------gctagctgaaattc-attccct--agtagttttcccaggaagga-a-a---
i Pteropus_alecto.KB030862.1                             I 42 C 0
s Pteropus_vampyrus.KN525825.1                             3533581  52 -   4952924 ----------------------------------------------------------------------------------------------c--atctcttc---------gctagctgaaattc-attccct--agtagttttcccaggaagga-a-a---
i Pteropus_vampyrus.KN525825.1                           I 42 C 0
s Puma_concolor.QAVW01001104.1                            18095570   1 +  38429054 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23226 111 +     91421 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  149718 111 -   7812017 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4095 111 +     72585 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909673  52 +   3329780 ----------------------------------------------------------------------------------------------c--atcttttg---------gctgagtagagttc-attctct--agtagttttcctaagaagga-g-g---
i Rhinolophus_sinicus.LVEH01000134.1                     I 37 C 0
s Rhinopithecus_bieti.k119_221883                            25059 111 +     27361 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118409 111 + 195417433 a-ttttag----tt-tt-----agtca---ATGCAA-TT--CACAATT-ATAATAG--TCC-ATCA--TAG--TT-TC-CTTAG---------TT--ATCTCTTT---------GTTGGCTAAAGTTT-GTTCTCT--GGGATTTTTCCCAAGTAGGA-A-A--A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232667 111 -   7961872 a-ttttag----tt-tt-----agtca---atgcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71051  52 -    116970 ----------------------------------------------------------------------------------------------c--atctctta---------gctagctgaaattc-attccct--agtagttttcccaggaagga-a-a---
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 42 C 0
s Saguinus_bicolor.k141_1429097                                528  75 +     27962 a-ttttag----tt-tt-----ggtca---attcaa-tt--cacaata-ataatat--ctc-accg--tag--tt-tc-cctag---------tc--atctcttt---------attggctg-------------------------------------------
i Saguinus_bicolor.k141_1429097                          C 0 I 22
s Saguinus_geoffroyi.k141_3779887                              528 110 +      6077 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaata-ataatat--ctc-accg--tag--tt-tc-cctag---------tc--atctcttt---------attggctgaag-tt-attccct--gggactctttccaagtagac-a-a--a
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              545 110 +      5971 a-ttttag----tt-tt-----agtga---attcaa-tt--cacaata-ataatat--ctc-acca--tag--tt-tc-cctgg---------tc--atctcttt---------attggctgaag-tt-attccct--gggactctttccgagtagac-a-a--a
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                598 110 +      5932 a-tgttag----tt-tt-----agtga---attcaa-tt--cacaata-ataatat--ctc-acca--tag--tt-tc-cctcg---------tc--atctcttt---------attggccgaag-tt-attccct--gggactctttccaagtagac-a-a--a
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               746 110 -      2099 a-tgttag----tt-tt-----agtga---attcaa-tt--cacaata-ataatat--ctc-agca--tag--tt-tc-cctgg---------tc--atctcttt---------attggtcgaag-tt-attccct--gggactctttccaagtagac-a-a--a
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387787  75 - 209938924 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaata-ataatat--ctc-accg--tag--tt-tc-cctag---------tc--atctcttt---------attggctg-------------------------------------------
i Saguinus_midas.LG03                                    C 0 I 22
s Saguinus_mystax.k141_8077960                                 546 110 +      5979 a-tgttag----tt-tt-----agtgg---attcaa-tt--cacaata-ataatat--ctc-agca--tag--tt-tc-cctgg---------tc--atctcttt---------attggccgaag-tt-attccct--gggactctttccaagtagac-a-a--a
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                                927 110 -      4301 a-ttttag----tt-tt-----agtca---attcaa-tt--cacaata-ataatat--ctc-accg--tag--tt-tc-cctag---------tc--atctcttt---------attggctgaag-tt-attccct--gggactctttccaagtagac-a-a--a
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     234977 111 +   5703754 a-ttttag----tt-tt-----agtca---attcag-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-tttag---------tc--atctcttc---------attggctgaagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4567 111 +     21866 a-ttttag----tt-tt-----agtca---attcag-tt--cacaatt-ataatat--ttc-acca--tag--tt-tc-tttag---------tc--atctcttc---------attggctgaagttt-attctct--gggactcttcccaagtagaa-a-a--a
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112760  63 +    313613 -----------------------------------------------------------------------------------G-TTTTCTTGCc--atttctta---------actgtttaaaattc-attccct--agtagtttccccaagaagca-a-a--t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 18 I 7
s Semnopithecus_entellus.k141_158471                         21549 109 +     27374 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25066 109 +     58920 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11561 109 -     45317 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19218 109 -     42441 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     21900 109 -     29113 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          24972 109 -     48123 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854728  72 -   1910179 ---------------------------------------------------------------tca--tag--ttt-cccatag-------tttc--ctctcttg---------gttggctagcgttc-attccct--agcagtgttgccaagaagga-a-a--g
i Solenodon_paradoxus.SolPar_flattened_line_126          I 27 C 0
s Spermophilus_dauricus.KZ294078.1                         1856793 107 +   3870691 a-ttttag----tt-tt-----agtct---atactg--t-ttct--tg-tt-----ctttt-gc--cctag--t-ttc-cctta---------tc--tgctcttg---------gttaggcaaagttt-attttct--agtactttccctaagtagga-a-aa-a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3263   1 -     97271 -----------------------------------------------------------------------------------------------------------------------------------------------------------------G---
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121232   1 +    196729 -----------------------------------------------------------------------------------------------------------------------------------------------------------------A---
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387146 111 +   1523678 a-ttttag----tt-tt-----actca---atgcaa-tt--cacaatt-ataatat--ttc-agca--tag--tt-ta-cttag---------tt--atctcttt---------gttggctaaagttt-gttctct--gggacttttcccaagtagga-a-a--a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1219  71 -      2009 -----------------------------------------------------------ct-gtct--tat--tt--t-tctag---------tc--atcttatg---------gtcagtggaagttc-attctct--aatagttcccccaggaaaga-g-a--a
i Tamandua_tetradactyla.TamTet_scaffold_445853           I 33 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187837  53 +    199430 ----------------------------------------------------------------------------------------------c--atatctta---------gttggctgaaattc-attccct--agtagttttcccatgaaggaaa-a---
i Tapirus_indicus.TapInd_scaffold_7432                   I 43 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101792  53 -    539355 ----------------------------------------------------------------------------------------------c--atatctta---------gttggttgaaattc-attccct--agtagttttcccatgaaggaaa-a---
i Tapirus_terrestris.TapTer_scaffold_755                 I 43 C 0
s Tarsius_lariang.k141_1780720                                3897  76 +      6850 -----------------------------------------------t-ct-------ttt-acca--tgg--tt-tc-cctgg---------tc--atctcttg---------attgactaaagttt-atgttat--agaatgtttcctaagtagga-a-a--a
i Tarsius_lariang.k141_1780720                           I 18 C 0
s Tarsius_wallacei.k141_226975                                3936  76 +     20590 -----------------------------------------------t-ct-------ttt-acca--tgg--tt-tc-cctgg---------tc--atctcttg---------attgactaaagttt-atgttat--agaatgtttcctaagtagga-a-a--a
i Tarsius_wallacei.k141_226975                           I 18 C 0
s Theropithecus_gelada.CM009954.1                           349462  87 - 186847797 -----------------------------------------CACAATT-ATAATAG--TCC-ATCA--TAG--TT-TC-CTTAG---------TT--ATCTCTTT---------GTTGGCTAAAGTTT-GTTCTCT--GGGGTTTTACCCAAGTAGGA-A-A--A
i Theropithecus_gelada.CM009954.1                        I 24 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16562  72 -     31044 -----------------------------------------------------------tt-gtct--tat--ctt-c-tctag---------cc--atcttttg---------gtcaactgaagttc-attttct--aatagttcacccacgaaaac-g-a--a
i Tolypeutes_matacus.TolMat_scaffold_31955               I 32 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475903  52 -    610378 ----------------------------------------------------------------------------------------------t--atcactta---------gctggctgaagttc-actgcct--agtagttttcccaagtagaa-a-a---
i Tonatia_saurophila.TonSau_scaffold_294                 I 47 C 0
s Trachypithecus_auratus.k141_1189070                        17113 109 +     26378 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29794 109 -     78344 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16434 109 +     25722 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24657 109 -     62838 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24774 109 +     46913 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5584 109 -     28527 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccacgtagga-a-a--a
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26596 109 -     64340 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24633 109 -     63452 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6075 109 +     22490 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3695 109 +      4141 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6501 109 -     13050 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251736 109 -   6242583 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57468 109 +     59866 a-ttttag----tt-tt-----agtca---a-gcaa-tt--cacaatt-ataatag--tcc-atca--tag--tt-tc-cttag---------tt--atctcttt---------gtt-gctaaagttt-gttctct--gggatttttcccaagtagga-a-a--a
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1829445 101 -   4065304 g-ttttag----tt-tt-----aatga---atgcca-tt-tcacagt---t-------ctt-gctc--aag--tt-tc-cttag---------tc--atttcttg---------gt-ggccgaagttc-gttcttc--agtacttctaccaagctgga-------
i Tupaia_chinensis.KB320699.1                            C 0 I 2
s Tupaia_tana.TupTan_flattened_line_394                       3993 101 -     70247 G-TTTTAG----TT-TT-----AGTGA---ATGCCT-TTT-CAcagt---t-------ctt-gcca--aag--tt-tc-cttag---------tc--atttcttg---------gt-ggctgaagttc-attcttc--tgtacttctaccaagttgga-------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 17
s Uropsilus_gracilis.UroGra_scaffold_7153                   103982  62 -    105689 -----------------------------------------------------------------------------------gttttc-ttgcc--gtctcttg---------actggctaaaactc-attcccc--agtagttttcccaagaagca-a-a---
i Uropsilus_gracilis.UroGra_scaffold_7153                I 13 I 8
s Ursus_maritimus.KK499267.1                                177884   1 +   5085361 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  21685 107 -     30710 a-ttttag----tt-tt-----agtca---atgccactt--catagtt-ct-------ttt-gcca--cag--tt-tc-cctac---------tc--atcacttg---------attggttgaagttc-gtttgca--agtacttttcccaagcagga-a-a--a
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20593 106 -    147434 a-ttttag----tt-tt-----agtca---atgccactt--catagtt-ct-------tt--gcca--cag--tt-tc-cctag---------tc--atcacttg---------attggttgaagttc-atttgct--agtacttttcccaagcagga-a-a--a
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101278   1 -    112863 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        162948 104 -    224448 A-TTTTAG----TT-TT-----AGTCT---ATGCTG--TT-TCT--TA-TT-----CTTTT-GC----TAG--T-TTC-CTTTA---------TC--TTCTATTG---------GTTAGCCAAAGTTT-ATTTTCC--AGTGCTTTCCCTAAGTAGGA-A-T--A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25162   1 -     86975 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a---
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Allochrocebus_solatus.k141_3554717                         14582   0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904   0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Pteronura_brasiliensis.PteBra_flattened_line_59017          4952 173 -     10349 I
e Mustela_putorius.JH418006.1                             14343848 171 +  14710649 I
e Mellivora_capensis.MelCap_flattened_line_19308             14811 176 -     74585 I
e Enhydra_lutris.KZ291758.1                               24906795 171 +  41312741 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090   0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011   0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081   0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570  82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884   0 +  69701581 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468   0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815   0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214   0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130   0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318   0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394   0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875   0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272   0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886   0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894   0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002   0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907   0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833   0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621   0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720   0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944   0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791   5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39077361  28 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400   0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366   0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877   0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354   0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755   0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002   0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857   0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641   0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323   0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090   0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278   5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421   0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921   0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648   0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698   0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038   0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752   0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583   0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559   0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420   0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852   0 +  48749331 C
e Bison_bison.KN261452.1                                     20465   0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932   0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970   0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762   0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036   0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937   0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962   9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                        927 77 +     36723 TAT-TCCC-T-GAGTTTGTGT---G-TATT-TAAAACTG--CCTGA-AGTATAC-TTTGAAATGTAGCCT----GACTA----GGTAT---AAAACCTTT
s Acinonyx_jubatus.LLWD01001279.1                           809317 74 +   1699592 tat-tctc-t--agttctt-g---tgtgtt-taaaac--tgcatga-gatccaaatttgaaggctggttt----a----gctggatat---aaaacc---
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411209 75 +  29979442 tat-tgcc-t-gagtccgt-g---tgtatt-taaaac--tgcctga-ggtctatatttgacgggcagtat----g----gctgggtgt---aaaacc---
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44221 78 +     53615 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40036 78 +     44087 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             68963 78 -     84148 tat-tccc-c-aagtttgtgc---a-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----cgtat---aaaaccttt
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41186 78 -     78289 tat-tccc-c-aagtttctgc---a-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----cgtat---aaaaccttt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40634 78 +     55831 tat-tccc-c-aagtttgtgc---a-tatt-taaaactg--cctga-agtgtacatttgaaatatagtct----gacca----tgtat---aaaaccttt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39075 78 -     64179 tat-tccc-c-aagtttgtgc---a-tatt-taaaactg--cctga-agtgtacatttgaaatatagtct----gacca----tgtat---aaaaccttt
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20718 78 -     24835 tat-tccc-c-aagtttgtgc---a-tatt-taaaactg--cctga-agtgtacatttgaaatatagtct----gacca----tgtat---aaaaccttt
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37701 78 +     45454 tat-tccc-c-aagtttgtgc---a-tatt-taaaactg--cctga-agtgtacatttgaaatatagtct----gacca----tgtat---aaaaccttt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43400 78 +     70886 tat-tccc-c-aagtttctgc---a-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----cgtat---aaaaccttt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5527 78 +     30854 tat-tccc-c-aagtttgtgc---a-tatt-taaaactg--cctga-agtgtacatttgaaatatagtct----gacca----tgtat---aaaaccttt
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29666 78 +     42133 tat-tccc-c-aagtttgtgc---a-tatt-taaaactg--cctga-agtgtacatttgaaatatagtct----gacca----tgtat---aaaaccttt
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      172925 76 -    412891 ata-ttcc-ttgagttatt-g---tatatt-ttaaacag--cctga-agtctatatttgaaggcggattt----g----gctagatat---aaatac---
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Aotus_azarae.k141_118258                                   47475 78 -     65372 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41221 78 +     43593 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669233 78 +   5030052 TAT-TCCC-C-GAGTTTGTGC---G-TATT-TAAAACTG--CCTGA-AGTATACATTTGAAATATAGTCT----GACCA----GGCAT---AAAACCTTT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20875 78 -     23494 tat-tccc-t-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6011 78 +      8415 tat-tccc-t-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      12281 77 -     32367 tat-ttcc-t-aagtt-tt-g---tgtatt-taaaactg--cctga-ggtctgtatttgcaggatagttt----ggcca----agtat---aaaacttgt
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16078 78 -     45910 tat-tcca-t-gaggttttgt---a-tctt-tcaaactg--cctga-agcctacatttaaaatacagttt----gccaa----gatat---aaaaccttt
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   754 76 -     15198 ata-ttcc-ttgagttatt-a---tatatt-ttaaacag--tctga-agtctatacatgaaggccaattt----g----gctggatat---aaaaac---
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 3
s Ateles_geoffroyi_b.tarseq_1536                               271461 78 +  21539123 tat-tcct-c-gagtttgtgc---a-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----cgtat---aaaaccttt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7632 78 +     48076 tat-tccc-c-gagtttgtgc---a-tatt-taaaactg--cctga-agtgtacatttgaaatatagtct----gacca----cgtat---aaaaccttt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2766 78 -     28759 tat-tccc-t-gagtttgtgc---a-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----cgtat---aaaaccttt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30318 78 +     44353 tat-tcct-c-gagtttgtgc---a-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----cgtat---aaaaccttt
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45693 78 -     71267 tat-tccc-c-gagtttgtgc---a-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----cgtat---aaaaccttt
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19749 78 -     33135 tat-tccc-c-gagtttgtgc---a-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----cgtat---aaaaccttt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2862 78 +     11645 tat-tccc-t-gagtttttgt---g-tgtt-taaaaccg--cctga-agtctaaacttgaaatgtagttt----ggcta----ggtat---aaaactttt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2864 78 -     19611 tat-tccc-t-gagtttttgt---g-tgtt-taaaaccg--cctga-agtctaaacttaaaatgtagttt----ggcta----ggtat---aaaactttt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4653 78 +     28062 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  39947 78 -     91139 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----ggtat---aaaacgttt
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17473 78 +     95584 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17386 78 +    119600 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6891 78 +     18648 tat-tcgc-c-aagtttgtgt---g-tatt-tcaaactg--tctga-agtatacatttgaaatagagtct----gacca----ggtat---aaaaccttc
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6567 78 -     13885 tat-tccc-c-aagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgagatagagtct----gacca----ggtat---aaaaccttc
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15253 78 +     17162 tat-tcgc-c-aagtttgtgc---g-tatt-tcaaactg--tctga-agtatacatttgaaatagagtct----gacca----ggtat---aaaaccttc
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450209 78 + 189096842 TAT-TCAC-C-AAGTTTGTGC---G-TATT-TCAAACTG--TCTGA-AGTATACATTTGAAATAGAGTCT----GACCA----GGTAT---AAAACCTTC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16502 78 -     18408 tat-tcgc-c-aagtttgtgc---g-tatt-tcaaactg--tctga-agtatacatttgaaatagagtct----gacca----ggtat---aaaaccttc
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42501646 75 +  60362399 tat-tgcc-t-gagttctt-g---tgtatt-taaaac--tgcctga-ggtctgtatttgaaagccagttt----g----gctgggtat---aaaact---
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5276 75 -     23171 tat-tgcc-t-gagttctt-g---tgtatt-taaaac--tgcctga-ggtctgtatttgaaagccagttt----g----gctgggtat---aaaact---
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218637 75 +   9314153 tat-tgcc-t-gagttctt-g---tgtatt-taaaac--tgcctga-ggtctgtatttgaaagccagttt----g----gctgggtat---aaaact---
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41611762 75 +  59632846 tat-tgcc-t-gagttctt-g---tgtatt-taaaac--tgcctga-ggtctgtatttgaaagccagttt----g----gctgggtat---aaaact---
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45103332 75 -  63665305 tat-tgcc-t-gagttctt-g---tgtatt-taaaac--tgcctga-ggtctgtatttgaaagccagttt----g----gctgggtat---aaaact---
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267284 75 +    496798 tat-tccc-t-gagtttttct---g-tatt-taaaattg--ACT-C-AGTCTAAATTTGAA--ATAGTTT----GTCTA----GATAT---AAAACCTTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                813 76 +      5315 ata-ttcc-ttgagttatt-g---tatatt-ttaaacag--cctga-agtctatacgtgaaggctgattt----g----gctggatat---aaaaac---
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 3
s Cebuella_niveiventris.k141_592277                           1787 78 -     12580 tat-tcgc-c-aagtttgtgt---g-tatt-tcaaactg--tctga-agtatacatttgaaatagagtct----gacca----ggtat---aaaaccttc
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39673 78 +     53515 tat-tcgc-c-aagtttgtgt---g-tatt-tcaaactg--tctga-agtatacatttgaaatagagtct----gacca----ggtat---gaaaccttc
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367865 78 -  26074798 cat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gagca----ggtat---aaaaccttt
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4754 78 -     34880 cat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gagca----ggtat---aaaaccttt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63849 78 -     89041 cat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gagca----ggtat---aaaaccttt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            449 77 -      1636 tat-tccc-t-gagtttttct---g-tatt-taaaactg--act-c-agtctaaatttgaaatacagttt----gtcga----gatat---aaaaccttg
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488870 75 -  27778364 tac-tccc-t-gagttcct-g---tgtatt-taaaactg--cctga-agtctgtatttgaagggcggttt----g----gctggatac---gaaact---
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15703 75 +     27315 tac-tccc-t-gagttcct-g---tgtatt-taaaactg--cctga-agtctgtatttgaagggcggttt----g----gctggatac---gaaact---
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137381 78 -   4669795 TAT-TCCC-T-GAGTTTGTAT---G-TATT-TAAAACTG--CCTGA-AGTATACATTTGACATATAGCCT----GACTA----GGTAG---AAAACCTTT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41122 78 +     47900 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          40954 78 -     44860 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          40936 78 -    148725 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacgtatagcct----gacta----ggtag---aaaaccttt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        23995 78 -     40656 tat-tccc-t-gagtttgtgt---g-tatt-tacaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           3930 78 +     20796 tat-tccc-t-gagtttgtgt---g-tatt-tacaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8185 78 -     17524 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23874 78 -     34525 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8585 78 -     25376 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361150 78 -  39242232 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266895 78 +  21565898 tat-tccc-t-gagtttgtgt---g-tatt-tacaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28348 78 -     45857 tat-tccc-t-gagtttgtgt---g-tatt-tacaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24139 78 -     32606 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          326 78 +      8499 tat-tccc-t-gagtttgtgt---g-tatt-tacaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21838 78 +     70610 tat-tccc-t-gagtttgtgt---g-tatt-tacaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18703 78 +     36323 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----tacta----ggtag---aaaaccttt
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9653 75 -     19938 tat-tccc-t-gagtgctc-g---tgtat-ttaaaactt--cccca-agtctatatatgaagcacggtttgtctg--------gttag---aaaact---
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             27280 78 -     33796 tat-tccc-t-gagtttttgt---g-tatt-taaaaccg--cctga-agtctaaatttaaaatgtagttt----tgcta----ggtgt---aaaaccttt
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1475 78 -     15404 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctaaatttaaaatgtagctt----ggcta----ggtgt---aaaaccttt
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5746 78 -     32913 tat-tccc-c-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16159 78 -     40346 tat-tccc-c-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16423 78 +    216457 tat-tccc-c-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16202 78 +     39636 tat-tccc-c-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            627 78 +      5346 tat-tccc-t-gagtttgtgc---g-tatt-taaaactg--cctga-agtataaatgtgaaatagactct----gacca----ggtat---aaaaccttc
i Chiropotes_albinasus.k141_1946120                      I 22 C 0
s Chiropotes_israelita.k141_313004                           39294 78 -    112038 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatgtagtct----gacca----ggtat---aaaaccttt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4866 78 +     34062 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatgtagtct----gacca----ggtat---aaaaccttt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339599 78 +  18827391 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6210 78 -     44032 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            300925 78 - 135778131 TAT-TCCC-T-GAGTTTGTGT---G-TATT-TAAAACTG--CCTGA-AGTATACATTTGACATATAGCCT----GACTA----GGTAG---AAAACCTTT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405474 78 -   2368649 TAT-TCCC-T-GAGTTTGTGT---G-TATT-TAAAACTG--CCTGA-AGTACACATTTGGAATATAGCCT----GACTA----GGTAG---AAAACCTTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374633 78 - 200372422 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtacacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5358 78 -      6605 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtacacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803776 67 +  53390261 -----------aagttcat-g---tgtatt-taagatag--cctgg-gatttttatttgatgggtagttt----g----gctgggtat---aaagtt---
i Condylura_cristata.JH655891.1                          I 7 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9166 73 +     10921 ata-ttcctt-gagttatt-g---tgtatt-ta-aactg--cctga-agtctatatttg-agaccagtgt----g----gctgggta----aaaaac---
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129               554 75 +     87169 tat-cctc-tg-agttctt-g---tgtatt-taaaac--tgactga-gatctatatttgaaggacagttt----a----gttggatac---aaaacc---
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2105856 75 -   2246927 tat-tccc-t-gagtggtt-g---tgtat-ttaaaactt--accca-agtctgtatatgaagcacagttagtctg--------gttat---aaaact---
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289312 78 +  12879189 tat-tccc-t-gagtttttgc---a-tatg-taaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661157 75 -   1390856 tac-tccc-t-gagttctt-g---tatatt-taaaactg--cctga-agtctgtatttgaagggcggttt----g----gctggatac---gaaact---
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  135946 75 -    198055 tac-tccc-t-gagttcct-g---tgtatt-taaaactg--cctga-agtctgtatttgaagggcggttt----g----gctggatac---gaaact---
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2500 77 +     19438 ata-ttcctt-gagttatt-g---tgtact-taacactg--cttgaaagtctatatttgtaggccaattt----a----agtgggtct---aaaaac---
i Eidolon_helvum.AWHC01266696.1                          C 0 I 3
s Eptesicus_fuscus.JH977646.1                             12574116 43 +  14770903 ------------------------------------------ctga-agtctatagtggaaggcagattt----g----gctgggtat---aaaaac---
i Eptesicus_fuscus.JH977646.1                            I 33 I 2
s Equus_asinus.JREZ01000139.1                              3038127 75 -   4378816 tat-ttcc-t-gagttctt-g---tgtgtt-taaaactg--cctga-agtctctatttgaggggcagttg----g----gcaggctat---aaaagc---
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21372061 75 +  39960074 tat-tccc-t-gagttctt-g---tgtgtt-taaaactg--cctga-agtctctatttgaggggcagttg----g----gcagggtat---aaaagc---
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408847 75 -    498745 tat-tccc-t-gagttctt-g---tgtgtt-taaaactg--cctga-agtctctatttgaggggcagttg----g----gcagggtat---aaaagc---
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               259157 78 +  21539334 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12276 78 -     24895 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtac---aaaaccttt
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               39988 78 -     70999 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              83948 78 +    112731 tat-tccc-t-gagtttttgt---g-tatt-gaaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40520 78 +     68309 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50845 78 -     65740 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtac---aaaaccttt
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21475 78 -     75513 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45668 78 -     97555 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2395 78 +     30972 tat-tcct-t-gagtttttgt---g-tatt-taaaactg--tctga-agtctaaatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40118 78 -     52037 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56519 78 -    111500 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtac---aaaaccttt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186242975 74 - 206538554 tat-tctc-t--agttctt-g---tgtatt-taaaac--tgcatga-gatccaaatttgaaggccggttt----a----actggatat---aaaacc---
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112757 74 - 205367284 tat-tctc-t--agttctt-g---tgtatt-taaaac--tgcatga-gatccaaatttgaaggccggttt----a----actggatat---aaaacc---
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24105 74 -     30238 tat-tctc-t--agttctt-g---tgtatt-taaaac--tgcatga-gatccaaatttgaaggccggttt----a----actggatat---aaaacc---
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     119677 42 -    137831 TAA-TCCC-T-GAACTTT-GT---A-TCTT-TCAAACTG--CCTGA-AGCCTAA----------------------------------------------
i Galago_moholi.ctg3793                                  C 0 I 1
s Galago_senegalensis.k141_991736                             3217 42 +     22493 TAA-TCCC-T-GAACTTT-GT---A-TCTT-TCAAACTG--CCTGA-AGCCTAA----------------------------------------------
i Galago_senegalensis.k141_991736                        C 0 I 1
s Galagoides_demidoff.k141_561628                            16685 43 +     32986 TAA-TCCC-T-GAACTTTTGT---A-TCTT-TCAAACTG--CCTGA-AGCCTAA----------------------------------------------
i Galagoides_demidoff.k141_561628                        C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_132127               3576 82 +      5976 cgt-tctc-t-gatttttttttttaatatt-taaaactg--cctga-agtctatatttgaaggatagttt----ggcta----gatat---aaaaccttt
i Galeopterus_variegatus.GalVar_scaffold_132127          C 0 I 162
s Gorilla_beringei.k141_3358147                               1281 77 -      8343 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatac-tttgaaatgcagcct----gacta----ggtat---aaaaccttt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250781 77 - 186649187 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatac-tttgaaatgtagcct----gacta----ggtat---aaaaccttt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12205 78 -     40692 tat-tcct-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33607 78 +     49394 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58475 78 -     66874 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7352 78 -     42923 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14348 78 -     53142 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26870 75 -    327341 Aat-tctc-cg-agttctt-g---tgtaat-taaaac--tgcctga-gatctatattcgacagccagttt----a----gttggatat---aaaacc---
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546400 75 -   1711038 ata-ttcctt-gagttatt-g---tgaatt-ga-aactg--cctaa-agtctatatttcaaggccaatta----g----gctgggtat---aaaaac---
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_23202               45718 75 +     49977 ata-ttcctt-gagttact-g---tgtatt-ta-aactg--cctaa-agtctgtatttcaaggccaatta----g----gctgggtat---aaaaac---
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 3
s Hoolock_leuconedys.ctg274                                    138675 77 -    630532 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatac-tttgaaatatagcct----gacta----ggtat---aaaaccttt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65548 75 +     83186 TTt-tctc-tg-agttctt-t---tgtatt-taaaac--ttcctgt-gttctatatttgaaggccagttt----a----gcgggatat---aaaacc---
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               1708 77 +     12352 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-ggtatac-tttgaaatataggct----gacta----ggtat---aaaaccttt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8891 77 +     55766 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-ggtatac-tttgaaatataggct----gacta----ggtat---aaaaccttt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048230 77 + 191637585 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatac-tttgaaatatagcct----gacta----ggtat---aaaaccttt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797562 77 +  11177569 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatac-tttgaaatatagcct----gacta----ggtat---aaaaccttt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375567 78 +   7955117 tttttttc-t-gagtt-tt-g---ggcatt-tagtactg--cctga-ggtctgtatttgcaggatagttt----ggctg----agtat---aaaactttc
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                     351 78 -      1527 tat-tccc-t-gagttttcat---a-tatt-taaaactg--cctga-agtctaaatttaaaatgtagttt----ggcta----ggtat---aaaaccttt
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40008 78 +    110728 tat-tccc-c-gagtttgtgc---a-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gacca----cgtat---aaaaccttt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14756996 78 +  30322482 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctaaatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         708 78 -     13097 tat-tccc-t-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatagagtct----gacca----ggtat---aaaaccttc
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            659 78 +      5940 tat-tccc-t-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatagagtct----gacca----ggtat---aaaaccttc
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         290 78 -      5717 tat-tccc-t-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatagagtct----gacca----ggtat---aaaaccttc
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6914 78 -     11567 tat-tccc-t-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatagagtct----gacca----ggtat---aaaaccttc
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8295 78 -     12945 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgaaatagagtct----gacca----ggtat---aaaaccttc
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5645 78 +     29618 tat-tcgc-t-gagtttttgt---g-catt-taaaacca--cctga-agtctaaatttaaaatgtagttt----ggcta----ggtat---aaaaccttt
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5642 78 +     31569 tat-tccc-t-gagtttttgt---g-catt-taaaacca--cctga-agtctaaatttaaaatgtagttt----ggcta----ggtat---aaaaccttt
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5652 81 +     24756 tat-tccc-t-gagtttttgt---g-catt-taaaacca--cctga-agtctaaatttaaaatgtagttt----ggcta----ggtattataaaaccttt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5647 78 +     16388 tat-tcgc-t-gagtttttgt---g-catt-taaaacca--cctga-agtctaaatttaaaatgtagttt----ggcta----ggtat---aaaaccttt
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        809768 75 -   3914936 tat-tgcc-t-gagttctt-g---tgtatt-taaaac--tgcctga-ggtctctatttgaaggccagttt----g----gctgggtgt---aaaacc---
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               329337 78 -   1826925 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2643 78 +     19643 tat-tccc-t-gagcttttgt---a-tctt-taaaactg--cctga-agcctacatttaaaacacaattt----gctaa----ggtat---aaaaccttt
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036301 78 -   6120653 tat-tccc-t-gagcttttgt---a-tctt-taaaactg--cctga-agcctacatttaaaacacaattt----gctaa----ggtat---aaaaccttt
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41610917 75 +  59628241 tat-tgcc-t-gagttctt-g---tgtatt-taaaac--tgcctga-ggtctatatttgaaagccagttt----g----gctgggtat---aaaact---
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              41617 78 -     61512 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gatta----ggcag---aaaaccttt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369245 78 -  60120075 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggcag---aaaaccttt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21565 78 +     30207 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacgtatagcct----gacta----ggcag---aaaaccttt
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18668 78 -     24934 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacgtatagcct----gacta----ggcag---aaaaccttt
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21452 78 +     30527 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacgtatagcct----gacta----ggcag---aaaaccttt
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32641 78 -     50087 tat-tccc-t-gagttggtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcat----gacta----ggcag---aaaaccttt
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42379 78 +     51645 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggcag---aaaaccttt
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                410953 78 - 187317192 TAT-TCCC-T-GAGTTTGTAT---G-TATT-TAAAACTG--CCTGA-AGTATACATTTGACGTATAGCCT----GACTA----GGCAG---AAAACCTTT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395836 78 +  25927173 TAT-TCCC-T-GAGtttgtat---g-tatt-taaaactG--CCTGA-AGTATACATTTGACATATAGCCT----GACTA----GGCAG---AAAACCTTT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  44968 78 -     62418 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatatcct----gacta----ggcag---aaaaccttt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21655 78 +     24253 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggcag---aaaaccttt
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41412 78 +     59329 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggcag---aaaaccttt
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267244 78 +    668171 tat-tccc-t-gagttggtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcat----gacta----ggcag---aaaaccttt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18590 78 +     21031 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggcag---aaaaccttt
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32322 78 +     33478 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggcag---aaaaccttt
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219555 77 -    270270 ata-ttcctt-gagttatt-g---tgtact-taacaccg--cttgaaagtctatatttgtaggccaattt----a----agtgggtct---aaaaac---
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 3
s Mandrillus_leucophaeus.scaffold280                        318720 78 +  24302211 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353552 78 -    752769 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670206 71 -    737560 tat-tctc-t-gagttctt-g---tgtatt-tataac------tga-aatctgtatttgaaggccagatt----g----gctggatat---aaaatc---
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217500 71 +    317179 tat-tctc-t-gagttctt-g---tgtatt-tataac------tga-aatctatatttgaaggccagttt----g----gctggatat---agaatc---
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7489659 78 +  40650429 tttttttc-t-gagtt-tt-g---tgcatt-taatactg--actga-ggtctgtattttcaggatagtct----ggctg----agtat---aaaactttt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146637 75 +    207569 ata-ttcctt-gagttatt-g---tgtttt-ta-aactg--cctga-agcctatacttgaaggcccattt----g----gctgggtaa---aaaaac---
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mico_argentatus.k141_582562                                 6675 78 +     17804 tat-tcac-c-aagtttgtgt---g-tatt-tcaaactg--tctga-agtatacatttgaaatagagtct----gacca----ggtat---aaaaccttc
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7448 78 -     12984 tat-ttgc-c-aagtttgtgt---g-tatt-tcaaactg--tctga-agtatacatttgaaatacagtct----gacca----ggtat---aaaaccttc
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15410 78 -     26561 tat-tcac-c-aagtttgtgt---g-tatt-tcaaactg--tctga-agtatacatttgaaatagagtct----gacca----ggtat---aaaaccttc
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981253 78 +  93316391 TAT-TCCc-t-gaatttttgt---g-tatt-taaaacCG--CCCAa-agtctaaatttaaaatgtagttt----gGCTA----GGTAT---AAAACCTTT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180902 76 +    200668 ata-ttcc-ttgagttgtt-g---tatatt-ttaaacag--cctga-agtctgtatttgaaggctgattt----g----gctgggtat---aaaaac---
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 3
s Miopithecus_ogouensis.k141_1534655                         18710 78 -     27822 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4778 75 +     27589 tat-tgcc-t-gagttctt-g---tgtatt-taaaac--tgcctga-ggtctctatttgaaggccagttt----g----gctgggtgt---aaaacc---
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     49114 78 -     62432 tat-tccc-t-gaattttcgt---t-tatt-taaaacca--cctga-agtctaaatttaaaatgtagttt----ggcta----ggtat---aaaaccttt
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175077 76 +    366855 ata-ttcc-ttaagttatt-g---tatgtt-taacactg--cctga-agtctgtatttgaaggcagattt----g----gctgggtat---aaaaac---
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Mungos_mungo.MunMun_flattened_line_18455                   14639 75 -     63510 Aat-tctc-tg-ggttctt-g---tgtatt-taaaac--tgcctga-gatctatatttgacagccagttt----a----gttggatat---aaaacc---
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          34021 43 +     47283 ------------------------------------------ctaa-agtctatattggaaggttggttt----g----gctgggtat---aaaaac---
i Murina_feae.MurFea_scaffold_17764                      I 25 I 3
s Myotis_brandtii.KE162005.1                               9788469 43 +  10118263 ------------------------------------------ctga-agtctatattggaaggctgattt----g----gctgggtat---aaaaac---
i Myotis_brandtii.KE162005.1                             I 33 I 3
s Myotis_davidii.KB100139.1                                4378881 43 +   6019432 ------------------------------------------ctga-agtctatattgggaggctgattt----g----gctgggtat---aaaaac---
i Myotis_davidii.KB100139.1                              I 33 I 3
s Myotis_lucifugus.GL429869.1                               378700 43 +   4330536 ------------------------------------------ctga-agtctatattggaaggctgattt----g----gctgggtat---aaaaac---
i Myotis_lucifugus.GL429869.1                            I 33 I 3
s Myotis_myotis.MyoMyo_scaffold_185951                        2420 43 +      3929 ------------------------------------------ctga-agtctatattggaaggctgattt----g----gctgggtat---aaaaac---
i Myotis_myotis.MyoMyo_scaffold_185951                   I 33 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116417 74 +    130748 tat-acct-t-gagtgctt-g---tagat--taaaactt--cccaa-agactatgtatgaagtacagttgggctg--------gttat---aaaact---
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              25012 78 +     34575 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465163 75 -  31847680 tat-tgcc-t-gagttctt-g---tgtatt-taaaac--tgcctga-ggtctctatttgaaggccagttt----g----gctgggtgt---aaaacc---
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   123279 76 -    149072 gta-gttc-ttgagttatt-g---tatatt-taaaactg--cctga-agtctatatttgaaggctgattt----g----gctgggtat---aaaatt---
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 235
s Nomascus_annamensis.k141_1771965                           49960 77 -    132029 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatac-tttgaaatatagcct----gacta----ggtat---aaaaccttt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6056 77 -     16345 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatac-tttgaaatatagcct----gacta----ggtat---aaaaccttt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             11939 77 +     22201 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatac-tttgaaatatagcct----gacta----ggtat---aaaaccttt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410276 77 -  22158432 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatac-tttgaaatatagcct----gacta----ggtat---aaaaccttt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22339 77 -     54323 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatac-tttgaaatatagcct----gacta----ggtat---aaaaccttt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194532 75 +   9404916 tat-tgcc-t-gagttctt-g---tgtatt-taaaat--tgcctga-ggtctatatttgaaagccagttt----g----gctgggtat---aaaact---
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93631417 78 + 196305487 tat-tccc-t-gagcttttgt---a-tctt-tcaaactg--cctga-agcctacatttaaaatacagttt----gctaa----agtat---aaaaccttt
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              806 78 +      2758 tat-tccc-t-gagcttttgt---a-tctt-tcaaactg--cctga-agcctacatttaaaatacagttt----gctaa----agtat---aaaaccttt
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559684 78 - 199412804 tat-tccc-t-gagcttttgt---a-tctt-tcaaactg--cctga-agcctacatttaaaatacagttt----gctaa----agtat---aaaaccttt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 13 C 0
s Odobenus_rosmarus.KB229312.1                             1447943 75 +   2017862 tat-tgcc-t-gagttctt-g---cgtatt-taaaac--tgcctga-ggtctctatttgaaggccagttt----g----gctgggtgt---aaaacc---
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35595 75 +    559221 tat-tgcc-t-gagttctt-g---tgtatt-taaaac--tgcctga-ggtctatatttgaaagccagttt----g----gctgggtat---aaaact---
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_85057                         22951 43 -     23432 TAA-GCCC-T-GAACTTTTGT---A-TCTT-TCAAACTG--CCTGA-AGCCTAA----------------------------------------------
i Otolemur_crassicaudatus.k141_85057                     C 0 I 1
s Otolemur_garnettii.GL873799.1                             347516 43 +   1103335 TAA-GCCC-T-GAACTTTTGT---A-TCTT-TCAAACTG--CCTGA-AGCCTAA----------------------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 I 1
s Pan_troglodytes.CM009242.2                               1468170 77 - 189151597 TAT-TCCC-T-Gagtttgtgt---g-tatt-taaaaCTG--CCTGA-AGTATAC-TTTGAAATGTAGCCT----GACTA----GGTAT---AAAACCTTT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20693 74 -    230217 tat-tctc-t--agttctt-g---tgtatt-taaaac--tgcatga-tacccaaatttgaaggccggttt----a----gctggatat---aaaacc---
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18458019 74 -  18783137 tat-tctc-t--agttctt-g---tgtatt-taaaac--tgcatga-tacccaaatttgaaggccggttt----a----gctggatat---aaaacc---
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968745 74 +   8748460 tat-tctc-t--agttctt-g---tgtatt-taaaac--tgcatga-tacctaaatttgaaggctggttt----a----gctggatat---aaaacc---
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   239564 78 - 183742232 TAT-TCCC-T-GAGTTTGTAT---G-TGTT-TAAAACTG--CCTGA-AGTATACATTTGACATATAGCCT----GACTA----GGTAG---AAAACCTTT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6031 78 +     21308 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287068 78 -  20919399 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18684 78 -     27687 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11820 78 +     16796 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18630 78 -     23640 tat-tccc-t-gagtttgtat---g-tatt-taaaactg--cctga-agtatacatttgacatatagcct----gacta----ggtag---aaaaccttt
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11622 75 +     78924 tat-cctc-gg-agttctt-g---tgtatt-taaaac--tgcctaa-gagctatatttgaaggccagttt----a----gttgggtat---aaaacc---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21520 78 +     31479 tat-tccc-t-gaacttttgt---a-tctt-tcaaactg--cctga-agcctacatttaaaatacagttt----gccaa----catat---aaaaccttt
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13891 78 -     24908 tat-tccc-t-gaacttttgt---a-tctt-tcaaactg--cctga-agcctacatttaaaatacagttt----gccaa----catat---aaaaccttt
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5466 78 +      7560 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-aatatacatttggaatatagcct----gacta----ggtag---aaaacgttt
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61173 78 -     63152 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-aatatacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43772 78 +     45295 tag-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-aatatacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1451 78 +      5735 TAT-TCCC-T-Gagtttgtgt---g-tatt-taaaaCTG--CCTGA-AATATACATTTGGAATATAGCCT----GACTA----GGTAG---AAAACCTTT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46285 43 +     46691 ------------------------------------------CTGA-AGTCtatagtggaaggccgattc----g----gctgggtat---aaaaac---
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        I 8 I 2
s Pithecia_albicans.k141_1239476                             61644 78 +    207309 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatataggct----gacca----ggtat---aaaaccttt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2764 78 -     25401 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatataggct----gacca----ggtat---aaaaccttt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28479 78 +     58159 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatataggct----gacca----ggtat---aaaaccttt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28755 78 +     63561 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatataggct----gacca----ggtat---aaaaccttt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28518 78 +     51148 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatataggct----gacca----ggtat---aaaaccttt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553511 78 -   4542175 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatataggct----gacca----ggtat---aaaaccttt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28502 78 +     51125 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtatacatttgaaatataggct----gacca----ggtat---aaaaccttt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4920 78 +     39866 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-aatacacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                             7 78 -      9282 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-aatacacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39408 78 -     87950 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-aatacacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39801 78 -     88961 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-aatacacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4500 78 -     39403 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-aatacacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39454 78 +     87928 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-aatacacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4498 78 -     60166 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-aatacacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11434 78 -     67232 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-aatacacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39350 78 -     90634 tat-tccc-g-gagtttgtgc---g-tatt-taaaactg--cctga-aatacacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40818 78 +     89403 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-aatacacatttgaaatatagtct----gacca----ggtat---aaaaccttt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173787 77 - 189387572 TAT-TCCC-T-Gagtttgtgt---g-tatt-taaaaCTG--CCTGA-AGTATAC-TTTGAAATGTAGCCT----GACTA----GGTAT---AAAACCTTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188785 77 -   9816681 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatac-tttgaaatgtagcct----gacta----ggtat---aaaaccttt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              23949 78 +     69807 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtaaacatttggaatatagctt----gacta----ggtag---aaaaccttt
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41144 78 -     80239 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtaaacatttggaatatagctt----gacta----ggtag---aaaaccttt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980152 78 +   4620579 TAT-TCCC-T-Gagtttttgt---g-tatt-taaaaCTG--CCTGa-agtctaaatttaaaatatagttt----ggcTA----GGTAT---AAAACCTTT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562731 78 -   2598838 TAT-TCCC-T-Gagtttttgt---g-tatt-taaaactg--cctga-aatctaaatttaaaatgtagttt----gGCTA----AGTAT---AAAACTTTT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            379 72 -      7103 tat-tccc-t-gagtttttgt---g-tatt-taaaaccg--cctga-a------atttaaaatgtagttt----ggcta----agtat---aaaactttt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                              973 78 -     11706 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-aatctaaatttaaaatgtagttt----ggcta----agtat---aaaactttt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4708 78 -     30655 tat-tccc-t-gagtttttgt---g-tatt-taaaaccg--cctga-aatctaaatttaaaatgtagttt----ggcta----agtat---aaaactttt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31033 78 +     46564 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-aatctaaatttaaaatgtagttt----ggcta----agtat---aaaactttt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91324 78 -     98465 tat-tccc-t-gagtttttgt---g-tatt-taaaactg--cctga-aatctaaatttaaaatgtagttt----ggcta----agtat---aaaactttt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          4948 72 +     35169 tat-tccc-t-gagtttttgt---g-tatt-taaaaccg--cctg-------aaatttaaaatgtagttt----ggcta----agtat---aaaactttt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48139 76 -     66298 aca-ggct-gtgagttact-g---tacatt-taaaactg--cctga-agtctgtatgtgaagactaattt----g----gctgggtat---caaaac---
i Pteronotus_parnellii.KE847780.1                        C 0 I 3
s Pteropus_alecto.KB030862.1                               5837058 77 -  28871421 ata-tccctt-gagttatt-g---tatact-taacactg--cttgaaagtctatatttgtaggccaattt----a----agtgggtct---aaaaac---
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Pteropus_vampyrus.KN525825.1                             3533633 77 -   4952924 ata-tccctt-gagttatt-g---tatact-taacactg--cttgaaagtctatatttgtaggccagttt----a----agtgggtct---aaaaac---
i Pteropus_vampyrus.KN525825.1                           C 0 I 3
s Puma_concolor.QAVW01001104.1                            18095571 74 +  38429054 tat-tctc-t--agttctt-g---tgtatt-taaaac--tgcatga-gatccaaatttgaaggccggttt----a----gctggatat---aaaacc---
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23337 78 +     91421 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  149829 78 -   7812017 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4206 78 +     72585 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909725 74 +   3329780 tta-ttcctt-gagttatt-a---tgtatt-ta-aactg--cctga-aatctatattggaaggccaattt----g----gctgggtat---aa-aac---
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 3
s Rhinopithecus_bieti.k119_221883                            25170 78 +     27361 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118520 78 + 195417433 TAT-TCCC-T-GAGTTTGTGT---G-TATT-TAAAACTG--CCTGA-AGTAAACATTTGGAATATAGCCT----GACTA----GGTAG---AAAACCTTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232778 78 -   7961872 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71103 77 -    116970 ata-ttcctt-gagttatt-g---tgtact-taacaccg--cttgaaagtctatatttttaggccagttt----t----agtgggtct---aaaaac---
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 3
s Saguinus_bicolor.k141_1429097                                625 78 +     27962 tat-tccc-t-gagtttgtgc---g-tatt-taaaactg--cctga-agtataaatgtgaaatagactct----gacca----ggtat---aaaaccttc
i Saguinus_bicolor.k141_1429097                          I 22 C 0
s Saguinus_geoffroyi.k141_3779887                              638 78 +      6077 tat-tccc-t-gagtttgtgc---g-tatt-taaaactg--cctga-agtataaatgtgaaatagattct----gacca----ggtat---aaaaccttc
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              655 76 +      5971 taa-tccc-c-gagtttgtgc---g-tatt-t-acactg---ctga-agtttacatgtgaaatagagtct----gacca----ggtat---aaaaccttc
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                708 77 +      5932 tct-tccc-c-gagtttgtgc---g-tatt-tata-ctg--cctga-agtttacatgtgaaatagagtct----gacca----ggtat---aaaaccttc
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               856 75 -      2099 tat-tccc-c-gaggttgtgc---g-tatt-t-atactg--cctga-agtttacatgtgaaatag--tct----gacca----ggtat---aaaaccttc
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387884 78 - 209938924 tat-tccc-t-gagtttgtgc---g-tatt-taaaactg--cctga-agtataaatgtgaaatagactct----gacca----ggtat---aaaaccttc
i Saguinus_midas.LG03                                    I 22 C 0
s Saguinus_mystax.k141_8077960                                 656 76 +      5979 tat-tccc-c-gagtttgtgc---g-tatt-taaaactg--cctga-agtttacatgtgaaatag--tct----gacca----ggtat---aaaaccttc
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1037 78 -      4301 tat-tccc-t-gagtttgtgc---g-tatt-taaaactg--cctga-agtataaatgtgaaatagattct----gacca----ggtat---aaaaccttc
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235088 78 +   5703754 cat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gagca----ggtat---aaaaccttt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4678 78 +     21866 cat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatacatttgaaatatagtct----gagca----ggtat---aaaaccttt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112830 67 +    313613 -----------aagttctt-a---tgtatt-taaaactg--cctgg-aatttatatttgatggtcagttt----g----gctgggtat---aaagcc---
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 7 C 0
s Semnopithecus_entellus.k141_158471                         21658 78 +     27374 tat-tccc-t-gagtttgtgt---g-tatt-taaaaccg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25175 78 +     58920 tat-tccc-t-gagtttgtgt---g-tatt-taaaaccg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11670 78 -     45317 tat-tccc-t-gagtttgtgt---g-tatt-taaaaccg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19327 78 -     42441 tat-tccc-t-gagtttgtgt---g-tatt-taaaaccg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22009 78 -     29113 tat-tccc-t-gagtttgtgt---g-tatt-taaaaccg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25081 78 -     48123 tat-tccc-t-gagtttgtgt---g-tatt-tgaaaccg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854800 71 -   1910179 ctt-tccc-t-gagttctt-g---tgcatt-taaaactg--CCCAA-AGCTTATATCGTAAGGGCACTTT----G--------AGTAT---AAAACC---
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1856900 78 +   3870691 attctttc-t-gagtt-tt-g---ggcatt-taatactg--cctga-ggtctgtatttgcaggataattt----ggctg----agtat---aaaactttc
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3264 16 -     97271 TAT-TGCC-T-GAGTTCTT---------------------------------------------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 23
s Suricata_suricatta.SurSur_flattened_line_6629             121233 75 +    196729 ATt-tctc-cg-cgttttt-g---tgtatt-taaaac--tgcctga-gatctatatttgaaggccagttt----a----gttggctat---aaaacc---
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387257 77 +   1523678 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtatac-tttgaaatatagcct----gacta----ggtat---aaaaccttt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1290 74 -      2009 tat-acct-t-gagtgctt-g---tagat--tgaaacgt--cccaa-agactatgtatgaagtacagttgggctg--------gttat---aaaact---
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187890 75 +    199430 tat-tccc-t-gagttctt-g---tgtgtt-taaaactg--cctga-agtctatatttgaagggcagttt----g----gctgggtat---aaaacc---
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101845 75 -    539355 tat-tccc-t-gagttctt-g---tgtgtt-taaaactg--cctga-agtctatatttgaagggcagttt----g----gctgggtat---aaaacc---
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                3973 77 +      6850 tat-tccc-t-gagtttttct---g-tatt-taaaactg--act-c-agtctaaatttgaaatacagttt----gtcta----gatat---aaaaccttt
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4012 77 +     20590 tat-tccc-t-cagtttttct---g-tatt-taaaactg--act-c-agtctaaatttgaaatacagttt----gtcta----gatat---aaaaccttt
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349549 78 - 186847797 TAT-TCCC-T-GAGTTTGTAT---G-TATT-TAAAACTG--CCTGA-AGTATACATTTGACATATAGCCT----GACTA----GGTAG---AAAaccttt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16634 75 -     31044 tat-cccc-t-gagtgctc-a---tgtat-ttaaaactt--cccca-agtctgtataggaaacacagtttgtctg--------gttat---aaaacg---
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    475955 76 -    610378 ata-ctcc-ttgagttatt-g---tatatt-ttaaacag--cctga-agtctgtctttaaaggtcgattt----g----gctggatat---aaaaac---
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_1189070                        17222 78 +     26378 tat-tccc-t-gagtttgtgt---g-tatt-taaaaccg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29903 78 -     78344 tat-tccc-t-gagtttgtgt---g-tatt-taaaacca--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16543 78 +     25722 tat-tccc-t-gagtttgtgt---g-tatt-taaaaccg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24766 78 -     62838 tat-tccc-t-gagtttgtgt---g-tatt-taaaaccg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24883 78 +     46913 tat-tccc-t-gagtttgtgt---g-tatt-taaaaccg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5693 78 -     28527 tat-tccc-t-gagtttgtgt---g-tatt-taaaaccg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26705 78 -     64340 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24742 78 -     63452 tat-tccc-t-gagtttgtgt---g-tatt-taaaactg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6184 78 +     22490 tat-tccc-t-gagtttgtgt---g-tatt-taaaaccg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3804 78 +      4141 tat-tccc-t-gagtttgtgt---g-tatt-taaaacca--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6610 78 -     13050 tat-tccc-t-gagtttgtgt---g-tatt-taaaaccg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251845 78 -   6242583 tat-tccc-t-gagtttgtgt---g-tatt-taaaacca--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57577 78 +     59866 tat-tccc-t-gagtttgtgt---g-tatt-taaaaccg--cctga-agtaaacatttggaatatagcct----gacta----ggtag---aaaaccttt
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1829548 78 -   4065304 tat-tctt-t-gagtgttt-g---tgtgtt-taaaatgt--cctga-agtctatattaaaaggataattt----ggcta----ggtag---aaaacttct
i Tupaia_chinensis.KB320699.1                            I 2 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4111 58 -     70247 ---------------------------gtt-taaagttt--cctga-agtctatattaaaaggataattt----ggcta----ggtag---gaaacttct
i Tupaia_tana.TupTan_flattened_line_394                  I 17 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104052 67 -    105689 -----------aagttctt-g---tatatt-taaaacta--cctgg-aatttatatttgatgggcagttt----g----gctgggtat---aatgct---
i Uropsilus_gracilis.UroGra_scaffold_7153                I 8 C 0
s Ursus_maritimus.KK499267.1                                177885 75 +   5085361 tat-tgcc-t-gagtcctt-g---tgtatt-taaaac--tgcctga-ggtctatatttgaaggccagttt----g----gctgggtgt---aaaacc---
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  21792 78 -     30710 tat-ttcc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctacatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20699 78 -    147434 tat-ttcc-t-gagtttttgt---g-tatt-taaaactg--cctga-agtctacatttaaaatatagttt----ggcta----ggtat---aaaaccttt
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101279 75 -    112863 tat-tgcc-t-gagttctt-g---tgtatt-taaaac--tgcctga-ggtctatatttgaaagccagttt----g----gctgggtat---aaaact---
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        163052 77 -    224448 TTT-GTAC-T-GAGTT-TT-G---TGCATT-TAATACTG--CCTGA-GGTCTATATTTGCAGGATAGTTA----GGCTG----AGTAT---AAAACCTTT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25163 75 -     86975 tat-tgcc-t-gagttctt-g---cgtatt-taaaac--tgcctga-ggtctctatttgaaggccagttt----g----gctgggtgt---aaaacc---
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Pteronura_brasiliensis.PteBra_flattened_line_59017          4952 173 -     10349 I
e Mustela_putorius.JH418006.1                             14343848 171 +  14710649 I
e Mellivora_capensis.MelCap_flattened_line_19308             14811 176 -     74585 I
e Enhydra_lutris.KZ291758.1                               24906795 171 +  41312741 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39077361 28 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1004  8 +     36723 GG-----------T-T-T---TC------A
s Acinonyx_jubatus.LLWD01001279.1                           809391  9 +   1699592 tt-----------c-ggtt---c------a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411284 11 +  29979442 tt-----------t-catgc-tc------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 203
s Allenopithecus_nigroviridis.k141_3755588                   44299  8 +     53615 gt-----------t-t-c---tc------a
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40114  8 +     44087 gt-----------t-t-c---tc------a
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             69041  8 -     84148 gg-----------t-t-c---tc------a
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41264  8 -     78289 gg-----------t-t-c---tc------a
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40712  8 +     55831 gg-----------t-t-c---tc------a
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39153  8 -     64179 gg-----------t-t-c---tc------a
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20796  8 -     24835 gg-----------t-t-c---tc------a
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37779  8 +     45454 gg-----------t-t-c---tc------a
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43478  8 +     70886 gg-----------t-t-c---tc------a
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5605  8 +     30854 gg-----------t-t-c---tc------a
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29744  8 +     42133 gg-----------t-t-c---tc------a
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173004  8 -    412891 ag-----------t-t-c---tt------a
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 I 1
s Aotus_azarae.k141_118258                                   47553  8 -     65372 gg-----------c-t-c---tc------a
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41299  8 +     43593 gg-----------t-t-c---tc------a
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669311  8 +   5030052 GG-----------T-T-C---TC------A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20953  8 -     23494 gg-----------t-t-c---tc------a
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6089  8 +      8415 gg-----------t-t-c---tc------a
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      12358  3 -     32367 ag-----------t----------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 1304
s Arctocebus_calabarensis.k141_1364444                       16156  8 -     45910 gc-----------t-t-c---tc------a
i Arctocebus_calabarensis.k141_1364444                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   833  8 -     15198 gg-----------t-t-c---tt------a
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 3 I 1
s Ateles_geoffroyi_b.tarseq_1536                               271539  8 +  21539123 gg-----------t-t-c---tc------a
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7710  8 +     48076 gg-----------t-t-c---tc------a
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2844  8 -     28759 gg-----------t-t-c---tc------a
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30396  8 +     44353 gg-----------t-t-c---tc------a
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45771  8 -     71267 gg-----------t-t-c---tc------a
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19827  8 -     33135 gg-----------t-t-c---tc------a
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2940  8 +     11645 gg-----------t-t-c---tc------a
i Avahi_laniger.k141_2756659                             C 0 I 1
s Avahi_peyrierasi.k141_1823318                               2942  8 -     19611 gg-----------t-t-c---tc------a
i Avahi_peyrierasi.k141_1823318                          C 0 I 1
s Cacajao_ayresi.k141_96119                                   4731  8 +     28062 cg-----------t-t-c---tc------a
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40025  8 -     91139 cg-----------t-t-c---cc------a
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17551  8 +     95584 cg-----------t-t-c---tc------a
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17464  8 +    119600 cg-----------t-t-c---tc------a
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6969  8 +     18648 gg-----------t-t-c---tc------a
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6645  8 -     13885 gg-----------t-t-c---tc------a
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15331  8 +     17162 gg-----------t-t-c---tc------a
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450287  8 + 189096842 GG-----------T-T-C---TC------A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16580  8 -     18408 gg-----------t-t-c---tc------a
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42501721 11 +  60362399 tt-----------t-ggttc-tc------t
i CanFam4.chr16                                          C 0 I 248
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5351 11 -     23171 tt-----------t-ggttc-TC------T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 248
s Canis_lupus_dingo.QKWQ01000480.1                          218712 11 +   9314153 tt-----------t-ggttc-tc------t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 248
s Canis_lupus_familiaris.chr16                            41611837 11 +  59632846 tt-----------t-ggttc-tc------t
i Canis_lupus_familiaris.chr16                           C 0 I 248
s Canis_lupus_orion.HG994398.1                            45103407 11 -  63665305 tt-----------t-ggttc-tc------t
i Canis_lupus_orion.HG994398.1                           C 0 I 248
s Carlito_syrichta.NW_007259797.1                           267359  8 +    496798 GG-----------T-T-C---TC------A
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_170178                892  8 +      5315 gg-----------t-t-c---tt------a
i Carollia_perspicillata.CarPer_scaffold_170178          I 3 I 1
s Cebuella_niveiventris.k141_592277                           1865  8 -     12580 ga-----------t-t-c---tc------a
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39751  8 +     53515 gg-----------t-t-c---tc------a
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367943  8 -  26074798 gg-----------t-t-c---tc------a
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4832  8 -     34880 gg-----------t-t-c---tc------a
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63927  8 -     89041 gg-----------t-t-c---tc------a
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            526  8 -      1636 gg-----------t-a-c---tc------a
i Cephalopachus_bancanus.k141_72622                      C 0 I 1
s Ceratotherium_simum.JH767749.1                          15488945 10 -  27778364 gt-----------t-g-ttc-tt------a
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15778 10 +     27315 gt-----------t-g-ttc-tt------a
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 1
s Cercocebus_atys.KQ010504.1                                137459  8 -   4669795 GT-----------T-T-C---TG------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41200  8 +     47900 tt-----------t-t-c---tg------a
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41032  8 -     44860 gt-----------t-t-c---tg------a
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41014  8 -    148725 gt-----------t-t-c---tg------a
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24073  8 -     40656 gt-----------t-t-c---tc------a
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4008  8 +     20796 gt-----------t-t-c---tc------a
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8263  8 -     17524 gt-----------t-t-c---tc------a
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23952  8 -     34525 gt-----------t-t-c---tc------a
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8663  8 -     25376 gt-----------t-t-c---tc------a
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361228  8 -  39242232 gt-----------t-t-c---tc------a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266973  8 +  21565898 gt-----------t-t-c---tc------a
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28426  8 -     45857 gt-----------t-t-c---tc------a
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24217  8 -     32606 gt-----------t-t-c---tc------a
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          404  8 +      8499 gt-----------t-t-c---tc------a
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21916  8 +     70610 gt-----------t-t-c---tc------a
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18781  8 +     36323 gt-----------t-t-c---tc------a
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9728 10 -     19938 cttg---------t-t-t---ac------a
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 1
s Cheirogaleus_major.k141_666340                             27358  8 -     33796 gg-----------t-t-c---tc------a
i Cheirogaleus_major.k141_666340                         C 0 I 1
s Cheirogaleus_medius.k141_759766                             1553  8 -     15404 gg-----------t-t-c---tc------a
i Cheirogaleus_medius.k141_759766                        C 0 I 1
s Cheracebus_lucifer.k141_2312002                             5824  8 -     32913 tg-----------t-t-c---tc------a
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16237  8 -     40346 tg-----------t-t-c---tc------a
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16501  8 +    216457 tg-----------t-t-c---tc------a
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16280  8 +     39636 tg-----------t-t-c---tc------a
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            705  8 +      5346 gg-----------t-t-c---tc------a
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39372  8 -    112038 cg-----------t-t-c---tc------a
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4944  8 +     34062 cg-----------t-t-c---tc------a
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339677  8 +  18827391 gt-----------t-t-c---tc------c
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6288  8 -     44032 gt-----------t-t-c---tc------c
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301003  8 - 135778131 GT-----------T-T-C---TC------C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405552  8 -   2368649 GT-----------T-T-C---TC------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374711  8 - 200372422 gt-----------t-t-c---tc------a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5436  8 -      6605 gt-----------t-t-c---tc------a
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803843 23 +  53390261 tttg-cttc-tcca-t-t---tctctttta
i Condylura_cristata.JH655891.1                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9242  8 +     10921 gg-----------t-t-t---tc------a
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 3 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129               629 11 +     87169 tt-----------t-ggttct-c------a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Dasypus_novemcinctus.JH564415.1                          2105931 11 -   2246927 tttg--------gt-t-t---ac------a
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Daubentonia_madagascariensis.ctg71                        289390  8 +  12879189 gg-----------t-t-c---tc------a
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661232 10 -   1390856 gt-----------t-g-ttc-tt------a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                  136021 10 -    198055 gt-----------t-g-ttc-tt------a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Eidolon_helvum.AWHC01266696.1                               2580  8 +     19438 gg-----------c-t-c---tc------a
i Eidolon_helvum.AWHC01266696.1                          I 3 I 1
s Eptesicus_fuscus.JH977646.1                             12574161  8 +  14770903 gg-----------t-t-c---tt------a
i Eptesicus_fuscus.JH977646.1                            I 2 I 1
s Equus_asinus.JREZ01000139.1                              3038202 11 -   4378816 tt-----------tgg-ttc-tc------a
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               21372136 11 +  39960074 tt-----------tgg-ttc-tc------a
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                              408922 11 -    498745 tt-----------tgg-ttc-tc------a
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erythrocebus_patas.Contig38                               259235  8 +  21539334 gt-----------t-t-c---tc------a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12354  8 -     24895 gg-----------t-t-c---tc------a
i Eulemur_albifrons.k141_51491                           C 0 I 1
s Eulemur_collaris.k141_601111                               40066  8 -     70999 gg-----------t-t-c---tc------a
i Eulemur_collaris.k141_601111                           C 0 I 1
s Eulemur_coronatus.k141_384460                              84026  8 +    112731 gg-----------t-t-c---tc------a
i Eulemur_coronatus.k141_384460                          C 0 I 1
s Eulemur_flavifrons.k141_433119                             40598  8 +     68309 gg-----------t-t-c---tc------a
i Eulemur_flavifrons.k141_433119                         C 0 I 1
s Eulemur_fulvus.k141_636316                                 50923  8 -     65740 gg-----------t-t-c---tc------a
i Eulemur_fulvus.k141_636316                             C 0 I 1
s Eulemur_macaco.k141_1562045                                21553  8 -     75513 gg-----------t-t-c---tc------a
i Eulemur_macaco.k141_1562045                            C 0 I 1
s Eulemur_mongoz.k141_232305                                 45746  8 -     97555 gg-----------t-t-c---tc------a
i Eulemur_mongoz.k141_232305                             C 0 I 1
s Eulemur_rubriventer.k141_1423786                            2473  8 +     30972 gg-----------t-t-c---tc------a
i Eulemur_rubriventer.k141_1423786                       C 0 I 1
s Eulemur_rufus.k141_514691                                  40196  8 -     52037 gg-----------t-t-c---tc------a
i Eulemur_rufus.k141_514691                              C 0 I 1
s Eulemur_sanfordi.k141_1122526                              56597  8 -    111500 gg-----------t-t-c---tc------a
i Eulemur_sanfordi.k141_1122526                          C 0 I 1
s Felis_catus.CM001381.2                                 186243049  9 - 206538554 tt-----------c-ggtt---c------a
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                          185112831  9 - 205367284 tt-----------c-ggtt---c------a
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_31944                 24179  9 -     30238 tt-----------c-ggtt---c------a
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_74466               15555  8 +     18121 gg-----------t-t-c---tc------a
i Galeopterus_variegatus.GalVar_scaffold_74466           I 171 I 1
s Gorilla_beringei.k141_3358147                               1358  8 -      8343 gg-----------t-t-t---tc------a
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250858  8 - 186649187 gg-----------t-t-t---tc------a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12283  8 -     40692 gg-----------t-t-c---tc------a
i Hapalemur_alaotrensis.k141_330369                      C 0 I 1
s Hapalemur_gilberti.k141_646465                             33685  8 +     49394 gg-----------t-t-c---tc------a
i Hapalemur_gilberti.k141_646465                         C 0 I 1
s Hapalemur_griseus.k141_763500                              58553  8 -     66874 gg-----------t-t-c---tc------a
i Hapalemur_griseus.k141_763500                          C 0 I 1
s Hapalemur_meridionalis.k141_258450                          7430  8 -     42923 gg-----------t-t-c---gc------a
i Hapalemur_meridionalis.k141_258450                     C 0 I 1
s Hapalemur_occidentalis.k141_578367                         14426  8 -     53142 gg-----------t-t-c---tc------a
i Hapalemur_occidentalis.k141_578367                     C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585                26945 11 -    327341 tt-----------t-ggttct-c------a
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hipposideros_armiger.JXIK01000431.1                      1546478  8 -   1711038 gg-----------t-t-c---tc------a
i Hipposideros_armiger.JXIK01000431.1                    I 3 I 1
s Hipposideros_galeritus.HipGal_scaffold_23202               45796  8 +     49977 ga-----------t-t-c---tc------a
i Hipposideros_galeritus.HipGal_scaffold_23202           I 3 I 1
s Hoolock_leuconedys.ctg274                                    138752  8 -    630532 gg-----------t-t-c---tc------a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65623 11 +     83186 tt-----------t-gatgtt-c------a
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 1
s Hylobates_agilis.k141_1155965                               1785  8 +     12352 gg-----------t-t-c---tc------a
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8968  8 +     55766 gg-----------t-t-c---tc------a
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048307  8 + 191637585 gg-----------t-t-c---tc------a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797639  8 +  11177569 gg-----------t-t-c---tc------a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375645  8 +   7955117 gg-----------T-G-T---TC------A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_4600452                                     429  8 -      1527 gg-----------t-t-c---tc------a
i Indri_indri.k141_4600452                               C 0 I 1
s Lagothrix_lagothricha.k141_246028                          40086  8 +    110728 gg-----------t-t-c---tc------a
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757074  8 +  30322482 gg-----------t-t-c---tc------a
i Lemur_catta.scaffold_24                                C 0 I 1
s Leontocebus_fuscicollis.k141_2994775                         786  8 -     13097 gg-----------t-t-c---tc------g
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            737  8 +      5940 gg-----------t-t-c---tc------g
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         368  8 -      5717 gg-----------t-t-c---tc------g
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     6992  8 -     11567 gg-----------t-t-c---tc------a
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8373  8 -     12945 gg-----------t-t-c---tc------a
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5723  8 +     29618 gg-----------t-t-c---tc------a
i Lepilemur_ankaranensis.k141_567626                     C 0 I 1
s Lepilemur_dorsalis.k141_387009                              5720  8 +     31569 gg-----------t-t-c---tc------a
i Lepilemur_dorsalis.k141_387009                         C 0 I 1
s Lepilemur_ruficaudatus.k141_330196                          5733  8 +     24756 gg-----------t-t-c---tc------a
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 1
s Lepilemur_septentrionalis.k141_360456                       5725  8 +     16388 gg-----------t-t-c---tc------a
i Lepilemur_septentrionalis.k141_360456                  C 0 I 1
s Leptonychotes_weddellii.KB714746.1                        809843 11 -   3914936 tt-----------t-ggttc-tc------a
i Leptonychotes_weddellii.KB714746.1                     C 0 I 209
s Lophocebus_aterrimus.ctg367                               329415  8 -   1826925 gt-----------t-t-c---tt------a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2721  8 +     19643 gc-----------t-t-c---cc------a
i Loris_lydekkerianus.k141_2031736                       C 0 I 1
s Loris_tardigradus.ctg83                                  5036379  8 -   6120653 gc-----------t-t-c---cc------a
i Loris_tardigradus.ctg83                                C 0 I 1
s Lycaon_pictus.CM007581.1                                41610992 11 +  59628241 tt-----------t-ggttc-tc------t
i Lycaon_pictus.CM007581.1                               C 0 I 248
s Macaca_arctoides.k141_1757516                              41695  8 -     61512 gt-----------t-t-c---tc------a
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369323  8 -  60120075 gt-----------t-t-c---tc------a
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21643  8 +     30207 gt-----------t-t-c---tc------a
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18746  8 -     24934 gt-----------t-t-c---tc------a
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21530  8 +     30527 gt-----------t-t-c---tc------a
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32719  8 -     50087 gt-----------t-t-c---tc------a
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42457  8 +     51645 gt-----------t-t-c---tc------a
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411031  8 - 187317192 GT-----------T-T-C---TC------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395914  8 +  25927173 GT-----------T-T-C---TC------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45046  8 -     62418 gt-----------t-t-c---tc------a
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21733  8 +     24253 gt-----------t-t-c---tc------a
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41490  8 +     59329 gt-----------t-t-c---tc------a
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267322  8 +    668171 gt-----------t-t-c---tc------a
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18668  8 +     21031 gt-----------t-t-c---tc------a
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32400  8 +     33478 gt-----------t-t-c---tc------a
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219635  8 -    270270 gc-----------c-t-c---tt------g
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 3 I 1
s Mandrillus_leucophaeus.scaffold280                        318798  8 +  24302211 gt-----------t-t-c---tt------a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353630  8 -    752769 gt-----------t-t-c---tt------a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670277 11 -    737560 tt-----------t-ctttc-cc------a
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                             217571 11 +    317179 tt-----------t-ctttc-cc------a
i Manis_pentadactyla.KN006162.1                          C 0 I 1
s Marmota_marmota.CZRN01000018.1                           7489737  8 +  40650429 gg-----------T-G-T---TC------A
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                       146715  8 +    207569 ga-----------t-t-c---tc------a
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 I 1
s Mico_argentatus.k141_582562                                 6753  8 +     17804 gg-----------t-t-c---tc------a
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7526  8 -     12984 gg-----------t-t-c---tc------a
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15488  8 -     26561 gg-----------t-t-c---tc------a
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981331  8 +  93316391 GG-----------T-T-C---TC------G
i Microcebus_murinus.CM007674.1                          C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_2233                180981  8 +    200668 gg-----------t-t-c---tt------a
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 3 I 1
s Miopithecus_ogouensis.k141_1534655                         18788  8 -     27822 gt-----------t-t-c---tc------a
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         4853 11 +     27589 tt-----------t-ggttc-tc------a
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 209
s Mirza_zaza.k141_766280                                     49192  8 -     62432 gg-----------t-t-c---tc------a
i Mirza_zaza.k141_766280                                 C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175156  8 +    366855 gg-----------t-t-c---tt------a
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 I 1
s Mungos_mungo.MunMun_flattened_line_18455                   14714 11 -     63510 tt-----------t-ggttct-c------a
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 1
s Murina_feae.MurFea_scaffold_17764                          34067  8 +     47283 gg-----------t-t-c---tt------a
i Murina_feae.MurFea_scaffold_17764                      I 3 I 1
s Myotis_brandtii.KE162005.1                               9788515  8 +  10118263 gg-----------t-t-c---tt------a
i Myotis_brandtii.KE162005.1                             I 3 I 1
s Myotis_davidii.KB100139.1                                4378927  8 +   6019432 gg-----------t-t-c---tt------a
i Myotis_davidii.KB100139.1                              I 3 I 1
s Myotis_lucifugus.GL429869.1                               378746  8 +   4330536 gg-----------t-t-c---tt------a
i Myotis_lucifugus.GL429869.1                            I 3 I 1
s Myotis_myotis.MyoMyo_scaffold_185951                        2466  8 +      3929 gg-----------t-t-c---tt------a
i Myotis_myotis.MyoMyo_scaffold_185951                   I 3 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116491 11 +    130748 tttg--------gt-t-t---at------a
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 1
s Nasalis_larvatus.k141_1350636                              25090  8 +     34575 gt-----------t-t-c---tc------a
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465238 11 -  31847680 tt-----------t-ggttc-tc------a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 209
s Noctilio_leporinus.NocLep_scaffold_7894                   123590  8 -    149072 tg-----------t-c-c---tt------a
i Noctilio_leporinus.NocLep_scaffold_7894                I 235 I 1
s Nomascus_annamensis.k141_1771965                           50037  8 -    132029 gg-----------t-t-c---tc------a
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6133  8 -     16345 gg-----------t-t-c---tc------a
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12016  8 +     22201 gg-----------t-t-c---tc------a
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410353  8 -  22158432 gg-----------t-t-c---tc------a
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22416  8 -     54323 gg-----------t-t-c---tc------a
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194607 11 +   9404916 tt-----------t-ggttc-tc------t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 248
s Nycticebus_bengalensis.LG01                             93631495  8 + 196305487 gc-----------t-t-c---cc------a
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_8166032                              884  8 +      2758 gc-----------t-t-c---cc------a
i Nycticebus_coucang.k141_8166032                        C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559762  8 - 199412804 gc-----------t-t-c---cc------a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Odobenus_rosmarus.KB229312.1                             1448018 11 +   2017862 tt-----------t-ggttc-tc------a
i Odobenus_rosmarus.KB229312.1                           C 0 I 213
s Otocyon_megalotis.JAEUCK010005147.1                        35670 11 +    559221 tt-----------t-ggttc-tc------t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 232
s Pan_troglodytes.CM009242.2                               1468247  8 - 189151597 GG-----------T-T-T---TC------A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20767  9 -    230217 tt-----------c-ggtt---c------a
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                              18458093  9 -  18783137 tt-----------c-ggtt---c------a
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               3968819  9 +   8748460 tt-----------c-ggtt---c------a
i Panthera_tigris.KE722367.1                             C 0 I 1
s Papio_anubis.CM001495.2                                   239642  8 - 183742232 GT-----------T-T-C---TT------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6109  8 +     21308 gt-----------t-t-c---tt------a
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287146  8 -  20919399 gt-----------t-t-c---tt------a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18762  8 -     27687 gt-----------t-t-c---tt------a
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11898  8 +     16796 gt-----------t-t-c---tt------a
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18708  8 -     23640 gt-----------t-t-c---tt------a
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11697 11 +     78924 tt-----------t-ggttct-c------a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_1921260                          21598  8 +     31479 gc-----------t-t-c---tc------a
i Perodicticus_ibeanus.k141_1921260                      C 0 I 1
s Perodicticus_potto.k141_1854441                            13969  8 -     24908 gc-----------t-t-c---tc------a
i Perodicticus_potto.k141_1854441                        C 0 I 1
s Piliocolobus_badius.k141_2495623                            5544  8 +      7560 gt-----------t-t-c---tc------a
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61251  8 -     63152 gt-----------t-t-c---tc------a
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43850  8 +     45295 gt-----------t-t-c---tc------a
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1529  8 +      5735 GT-----------T-T-C---TC------A
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46330  8 +     46691 gg-----------t-t-c---tt------a
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        I 2 I 1
s Pithecia_albicans.k141_1239476                             61722  8 +    207309 cg-----------t-t-c---tc------a
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2842  8 -     25401 cg-----------t-t-c---tc------a
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28557  8 +     58159 cg-----------t-t-c---tc------a
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28833  8 +     63561 cg-----------t-t-c---tc------a
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28596  8 +     51148 cg-----------t-t-c---tc------a
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553589  8 -   4542175 cg-----------t-t-c---tc------a
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28580  8 +     51125 cg-----------t-t-c---tc------a
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        4998  8 +     39866 cg-----------t-t-c---tc------a
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                            85  8 -      9282 cg-----------t-t-c---tc------a
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39486  8 -     87950 cg-----------t-t-c---tc------a
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39879  8 -     88961 cg-----------t-t-c---tc------a
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4578  8 -     39403 cg-----------t-t-c---tc------a
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39532  8 +     87928 cg-----------t-t-c---tc------a
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4576  8 -     60166 cg-----------t-t-c---tc------a
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11512  8 -     67232 ca-----------t-t-c---tc------a
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39428  8 -     90634 cg-----------t-t-c---tc------a
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40896  8 +     89403 cg-----------t-t-c---tc------a
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173864  8 - 189387572 gg-----------t-t-t---tc------a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188862  8 -   9816681 gg-----------t-t-t---tc------a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24027  8 +     69807 gt-----------t-t-c---tc------a
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41222  8 -     80239 gt-----------t-t-c---tc------a
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980230  8 +   4620579 Gg-----------t-t-c---tc------a
i Prolemur_simus.MPIZ01000396.1                          C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                    1562809  8 -   2598838 GG-----------T-T-C---TC------A
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 1
s Propithecus_coronatus.k141_209299                            451  8 -      7103 gg-----------t-t-c---tc------a
i Propithecus_coronatus.k141_209299                      C 0 I 1
s Propithecus_diadema.k141_153680                             1051  8 -     11706 gg-----------t-t-c---tc------a
i Propithecus_diadema.k141_153680                        C 0 I 1
s Propithecus_edwardsi.k141_635656                            4786  8 -     30655 gg-----------t-t-c---tc------a
i Propithecus_edwardsi.k141_635656                       C 0 I 1
s Propithecus_perrieri.k141_1496898                          31111  8 +     46564 gg-----------t-t-c---tc------a
i Propithecus_perrieri.k141_1496898                      C 0 I 1
s Propithecus_tattersalli.k141_1127767                       91402  8 -     98465 gg-----------t-t-c---tc------a
i Propithecus_tattersalli.k141_1127767                   C 0 I 1
s Propithecus_verreauxi.k141_1047036                          5020  8 +     35169 gg-----------t-t-c---tc------a
i Propithecus_verreauxi.k141_1047036                     C 0 I 1
s Pteronotus_parnellii.KE847780.1                            48218  8 -     66298 gg-----------t-t-c---tt------a
i Pteronotus_parnellii.KE847780.1                        I 3 I 1
s Pteropus_alecto.KB030862.1                               5837138  8 -  28871421 gg-----------t-t-c---tc------a
i Pteropus_alecto.KB030862.1                             I 3 I 1
s Pteropus_vampyrus.KN525825.1                             3533713  8 -   4952924 gg-----------t-t-c---tc------a
i Pteropus_vampyrus.KN525825.1                           I 3 I 1
s Puma_concolor.QAVW01001104.1                            18095645  9 +  38429054 tt-----------c-ggtt---c------a
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             23415  8 +     91421 gt-----------t-t-c---tc------a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  149907  8 -   7812017 gt-----------t-t-c---tc------a
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4284  8 +     72585 gt-----------t-t-c---tc------a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909802  8 +   3329780 gg-----------t-t-c---tc------a
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 I 1
s Rhinopithecus_bieti.k119_221883                            25248  8 +     27361 gt-----------t-t-c---tc------a
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118598  8 + 195417433 GT-----------T-T-C---TC------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232856  8 -   7961872 gt-----------t-t-c---tc------a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71183  8 -    116970 gg-----------c-t-c---tc------a
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 3 I 1
s Saguinus_bicolor.k141_1429097                                703  8 +     27962 gg-----------t-t-c---tc------a
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              716  8 +      6077 gg-----------t-t-c---tc------t
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              731  8 +      5971 gg-----------t-g-c---tc------a
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                785  8 +      5932 gg-----------t-t-c---tc------a
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               931  8 -      2099 gg-----------t-g-c---tc------a
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387962  8 - 209938924 gg-----------t-t-c---tc------a
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 732  8 +      5979 gg-----------t-g-c---tc------a
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1115  8 -      4301 gg-----------t-t-c---tc------a
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235166  8 +   5703754 gg-----------t-t-c---tc------a
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4756  8 +     21866 gg-----------t-t-c---tc------a
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112897 23 +    313613 tttg-gttc-tcca-t-t---tctctttta
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 1
s Semnopithecus_entellus.k141_158471                         21736  8 +     27374 gt-----------t-t-c---tc------a
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25253  8 +     58920 gt-----------t-t-c---tc------a
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11748  8 -     45317 gt-----------t-t-c---tc------a
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19405  8 -     42441 gt-----------t-t-c---tc------a
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22087  8 -     29113 gt-----------t-t-c---tc------a
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25159  8 -     48123 gt-----------t-t-c---tc------a
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854871  8 -   1910179 AT-----------A-T-T---TC------T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1856978  8 +   3870691 gg-----------T-G-T---TC------A
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629             121308 11 +    196729 tt-----------t-gtttct-t------a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Symphalangus_syndactylus.tarseq_199                       387334  8 +   1523678 gg-----------t-t-c---tc------a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1364 11 -      2009 cttg--------gt-t-t---ac------a
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_7432                      187965 10 +    199430 tt-----------t-g-ttc-tc------a
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    101920 10 -    539355 gt-----------t-g-ttc-tc------a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_1780720                                4050  8 +      6850 ga-----------t-t-c---tc------a
i Tarsius_lariang.k141_1780720                           C 0 I 1
s Tarsius_wallacei.k141_226975                                4089  8 +     20590 ga-----------t-t-c---tc------a
i Tarsius_wallacei.k141_226975                           C 0 I 1
s Theropithecus_gelada.CM009954.1                           349627  8 - 186847797 gt-----------t-t-c---tt------a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16709 11 -     31044 cttg--------gg-t-t---ac------a
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_294                    476034  8 -    610378 gg-----------t-t-c---tt------a
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 I 1
s Trachypithecus_auratus.k141_1189070                        17300  8 +     26378 gt-----------t-t-c---tc------a
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29981  8 -     78344 gt-----------t-t-c---tc------a
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16621  8 +     25722 gt-----------t-t-c---tc------a
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24844  8 -     62838 gt-----------t-t-c---tc------a
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24961  8 +     46913 gt-----------t-t-c---tc------a
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5771  8 -     28527 gt-----------t-t-c---tc------a
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26783  8 -     64340 gt-----------t-t-c---tc------a
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24820  8 -     63452 gt-----------t-t-c---tc------a
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6262  8 +     22490 gt-----------t-t-c---tc------a
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3882  8 +      4141 gt-----------t-t-c---tc------a
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6688  8 -     13050 gt-----------t-t-c---tc------a
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251923  8 -   6242583 gt-----------t-t-c---tc------a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57655  8 +     59866 gt-----------t-t-c---tc------a
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1829626  8 -   4065304 gg-----------c-t-c---tc------a
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_394                       4169  8 -     70247 gg-----------c-t-c---tc------a
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_7153                   104119 23 -    105689 gttggct-catc-a-t-t---tcactatta
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 1
s Ursus_maritimus.KK499267.1                                177960 11 +   5085361 tt-----------t-ggttc-tc------a
i Ursus_maritimus.KK499267.1                             C 0 I 217
s Varecia_rubra.k141_787544                                  21870  8 -     30710 gg-----------t-t-c---tc------a
i Varecia_rubra.k141_787544                              C 0 I 1
s Varecia_variegata.k141_289850                              20777  8 -    147434 gg-----------t-t-c---tc------a
i Varecia_variegata.k141_289850                          C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_12041                101354 11 -    112863 tc-----------t-ggttc-tc------t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 266
s Xerus_inauris.XerIna_scaffold_2302                        163129  8 -    224448 GG-----------T-G-C---CC------A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732         25238 11 -     86975 tt-----------t-ggttc-tc------a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 213
e Otolemur_garnettii.GL873799.1                             347559  1 +   1103335 I
e Otolemur_crassicaudatus.k141_85057                         22994  1 -     23432 I
e Galagoides_demidoff.k141_561628                            16728  1 +     32986 I
e Galago_senegalensis.k141_991736                             3259  1 +     22493 I
e Galago_moholi.ctg3793                                     119719  1 -    137831 I
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              3280 23 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_59017          4952 173 -     10349 I
e Mustela_putorius.JH418006.1                             14343848 171 +  14710649 I
e Mellivora_capensis.MelCap_flattened_line_19308             14811 176 -     74585 I
e Enhydra_lutris.KZ291758.1                               24906795 171 +  41312741 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39077361 28 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1012 4 +     36723 TTCC
s Acinonyx_jubatus.LLWD01001279.1                           809401 4 +   1699592 tttc
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411498 4 +  29979442 tttc
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 203 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44307 4 +     53615 tttt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40122 4 +     44087 tttc
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             69049 4 -     84148 tttc
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41272 4 -     78289 tttc
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40720 4 +     55831 tttc
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39161 4 -     64179 tttc
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20804 4 -     24835 tttc
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37787 4 +     45454 tttc
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43486 4 +     70886 tttc
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5613 4 +     30854 tttc
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29752 4 +     42133 tttc
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173013 4 -    412891 tttc
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Aotus_azarae.k141_118258                                   47561 4 -     65372 tttc
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41307 4 +     43593 tttc
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669319 4 +   5030052 TTTC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20961 4 -     23494 tttc
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6097 4 +      8415 tttc
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16165 4 -     45910 tttt
i Arctocebus_calabarensis.k141_1364444                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   842 4 -     15198 tttc
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 1 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271547 4 +  21539123 tttc
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7718 4 +     48076 tttg
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2852 4 -     28759 tttc
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30404 4 +     44353 tttc
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45779 4 -     71267 tttc
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19835 4 -     33135 tttc
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2949 4 +     11645 tttc
i Avahi_laniger.k141_2756659                             I 1 C 0
s Avahi_peyrierasi.k141_1823318                               2951 4 -     19611 tttc
i Avahi_peyrierasi.k141_1823318                          I 1 C 0
s Cacajao_ayresi.k141_96119                                   4739 4 +     28062 tttc
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40033 4 -     91139 tttc
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17559 4 +     95584 tttc
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17472 4 +    119600 tttc
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6977 4 +     18648 tctc
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6653 4 -     13885 tttc
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15339 4 +     17162 tctc
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450295 4 + 189096842 TCTC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16588 4 -     18408 tctc
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42501980 4 +  60362399 tttc
i CanFam4.chr16                                          I 248 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5610 4 -     23171 tttc
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 248 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218971 4 +   9314153 tttc
i Canis_lupus_dingo.QKWQ01000480.1                       I 248 C 0
s Canis_lupus_familiaris.chr16                            41612096 4 +  59632846 tttc
i Canis_lupus_familiaris.chr16                           I 248 C 0
s Canis_lupus_orion.HG994398.1                            45103666 4 -  63665305 tttc
i Canis_lupus_orion.HG994398.1                           I 248 C 0
s Carlito_syrichta.NW_007259797.1                           267368 4 +    496798 TTTA
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                901 4 +      5315 tttc
i Carollia_perspicillata.CarPer_scaffold_170178          I 1 C 0
s Cebuella_niveiventris.k141_592277                           1873 4 -     12580 tctc
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39759 4 +     53515 tctc
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367951 4 -  26074798 tttc
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4840 4 -     34880 tttc
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63935 4 -     89041 tttc
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            535 4 -      1636 ttta
i Cephalopachus_bancanus.k141_72622                      I 1 C 0
s Ceratotherium_simum.JH767749.1                          15488956 4 -  27778364 tctc
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15789 4 +     27315 tctc
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 1 C 0
s Cercocebus_atys.KQ010504.1                                137467 4 -   4669795 TTTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41208 4 +     47900 tttc
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41040 4 -     44860 tttc
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41022 4 -    148725 tttc
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24081 4 -     40656 tttc
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4016 4 +     20796 tttc
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8271 4 -     17524 tttc
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23960 4 -     34525 tttc
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8671 4 -     25376 tttc
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361236 4 -  39242232 tttc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266981 4 +  21565898 tttc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28434 4 -     45857 tttc
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24225 4 -     32606 tttc
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          412 4 +      8499 tttc
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21924 4 +     70610 tttc
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18789 4 +     36323 tttc
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9739 4 -     19938 tttc
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 1 C 0
s Cheirogaleus_major.k141_666340                             27367 4 -     33796 tttc
i Cheirogaleus_major.k141_666340                         I 1 C 0
s Cheirogaleus_medius.k141_759766                             1562 4 -     15404 tttc
i Cheirogaleus_medius.k141_759766                        I 1 C 0
s Cheracebus_lucifer.k141_2312002                             5832 4 -     32913 tttc
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16245 4 -     40346 tttc
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16509 4 +    216457 tttc
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16288 4 +     39636 tttc
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            713 4 +      5346 tttc
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39380 4 -    112038 tttc
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4952 4 +     34062 tttc
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339685 4 +  18827391 tttc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6296 4 -     44032 tttc
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301011 4 - 135778131 TTTC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405560 4 -   2368649 TTTC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374719 4 - 200372422 tttc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5444 4 -      6605 tttc
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803867 4 +  53390261 tttc
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9251 4 +     10921 tttc
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               641 4 +     87169 tttc
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Dasypus_novemcinctus.JH564415.1                          2105943 4 -   2246927 tttc
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                        289399 4 +  12879189 tttc
i Daubentonia_madagascariensis.ctg71                     I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661243 4 -   1390856 tctc
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136032 4 -    198055 tctc
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Eidolon_helvum.AWHC01266696.1                               2589 4 +     19438 atcc
i Eidolon_helvum.AWHC01266696.1                          I 1 C 0
s Enhydra_lutris.KZ291758.1                               24906966 4 +  41312741 tttc
i Enhydra_lutris.KZ291758.1                              I 171 C 0
s Eptesicus_fuscus.JH977646.1                             12574170 4 +  14770903 tttg
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              3038214 4 -   4378816 tttc
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               21372148 4 +  39960074 tttc
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                              408934 4 -    498745 tttc
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erythrocebus_patas.Contig38                               259243 4 +  21539334 tttc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12363 4 -     24895 tttc
i Eulemur_albifrons.k141_51491                           I 1 C 0
s Eulemur_collaris.k141_601111                               40075 4 -     70999 tttc
i Eulemur_collaris.k141_601111                           I 1 C 0
s Eulemur_coronatus.k141_384460                              84035 4 +    112731 tttc
i Eulemur_coronatus.k141_384460                          I 1 C 0
s Eulemur_flavifrons.k141_433119                             40607 4 +     68309 tttc
i Eulemur_flavifrons.k141_433119                         I 1 C 0
s Eulemur_fulvus.k141_636316                                 50932 4 -     65740 tttc
i Eulemur_fulvus.k141_636316                             I 1 C 0
s Eulemur_macaco.k141_1562045                                21562 4 -     75513 tttc
i Eulemur_macaco.k141_1562045                            I 1 C 0
s Eulemur_mongoz.k141_232305                                 45755 4 -     97555 tttc
i Eulemur_mongoz.k141_232305                             I 1 C 0
s Eulemur_rubriventer.k141_1423786                            2482 4 +     30972 tttc
i Eulemur_rubriventer.k141_1423786                       I 1 C 0
s Eulemur_rufus.k141_514691                                  40205 4 -     52037 tttc
i Eulemur_rufus.k141_514691                              I 1 C 0
s Eulemur_sanfordi.k141_1122526                              56606 4 -    111500 tttc
i Eulemur_sanfordi.k141_1122526                          I 1 C 0
s Felis_catus.CM001381.2                                 186243059 4 - 206538554 tttc
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                          185112841 4 - 205367284 tttc
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24189 4 -     30238 tttc
i Felis_nigripes.FelNig_flattened_line_31944             I 1 C 0
s Galago_moholi.ctg3793                                     119720 4 -    137831 TTTC
i Galago_moholi.ctg3793                                  I 1 C 0
s Galago_senegalensis.k141_991736                             3260 4 +     22493 TTTC
i Galago_senegalensis.k141_991736                        I 1 C 0
s Galagoides_demidoff.k141_561628                            16729 4 +     32986 TTTC
i Galagoides_demidoff.k141_561628                        I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15564 4 +     18121 tttc
i Galeopterus_variegatus.GalVar_scaffold_74466           I 1 C 0
s Gorilla_beringei.k141_3358147                               1366 4 -      8343 ttcc
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250866 4 - 186649187 ttcc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12292 4 -     40692 tttc
i Hapalemur_alaotrensis.k141_330369                      I 1 C 0
s Hapalemur_gilberti.k141_646465                             33694 4 +     49394 tttc
i Hapalemur_gilberti.k141_646465                         I 1 C 0
s Hapalemur_griseus.k141_763500                              58562 4 -     66874 tttc
i Hapalemur_griseus.k141_763500                          I 1 C 0
s Hapalemur_meridionalis.k141_258450                          7439 4 -     42923 tttc
i Hapalemur_meridionalis.k141_258450                     I 1 C 0
s Hapalemur_occidentalis.k141_578367                         14435 4 -     53142 tttc
i Hapalemur_occidentalis.k141_578367                     I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26957 4 -    327341 tttc
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546487 4 -   1711038 tttc
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45805 4 +     49977 tttc
i Hipposideros_galeritus.HipGal_scaffold_23202           I 1 C 0
s Hoolock_leuconedys.ctg274                                    138760 4 -    630532 ttcc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65635 4 +     83186 tttc
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1 C 0
s Hylobates_agilis.k141_1155965                               1793 4 +     12352 ttcc
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8976 4 +     55766 ttcc
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048315 4 + 191637585 ttcc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797647 4 +  11177569 ttcc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     375654 2 +   7955117 G--C
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 I 688
s Indri_indri.k141_4600452                                     438 4 -      1527 tttc
i Indri_indri.k141_4600452                               I 1 I 8
s Lagothrix_lagothricha.k141_246028                          40094 4 +    110728 tttc
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757083 4 +  30322482 tttc
i Lemur_catta.scaffold_24                                I 1 C 0
s Leontocebus_fuscicollis.k141_2994775                         794 4 -     13097 tttc
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            745 4 +      5940 tttc
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         376 4 -      5717 tttc
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7000 4 -     11567 tttc
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8381 4 -     12945 tttc
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5732 4 +     29618 tttc
i Lepilemur_ankaranensis.k141_567626                     I 1 C 0
s Lepilemur_dorsalis.k141_387009                              5729 4 +     31569 tttc
i Lepilemur_dorsalis.k141_387009                         I 1 C 0
s Lepilemur_ruficaudatus.k141_330196                          5742 4 +     24756 tttc
i Lepilemur_ruficaudatus.k141_330196                     I 1 C 0
s Lepilemur_septentrionalis.k141_360456                       5734 4 +     16388 tctc
i Lepilemur_septentrionalis.k141_360456                  I 1 C 0
s Leptonychotes_weddellii.KB714746.1                        810063 4 -   3914936 tttc
i Leptonychotes_weddellii.KB714746.1                     I 209 C 0
s Lophocebus_aterrimus.ctg367                               329423 4 -   1826925 tttc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2730 4 +     19643 tttt
i Loris_lydekkerianus.k141_2031736                       I 1 C 0
s Loris_tardigradus.ctg83                                  5036388 4 -   6120653 tttt
i Loris_tardigradus.ctg83                                I 1 C 0
s Lycaon_pictus.CM007581.1                                41611251 4 +  59628241 tttc
i Lycaon_pictus.CM007581.1                               I 248 C 0
s Macaca_arctoides.k141_1757516                              41703 4 -     61512 tttc
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369331 4 -  60120075 tttc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21651 4 +     30207 tttc
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18754 4 -     24934 tttc
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21538 4 +     30527 tttc
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32727 4 -     50087 tttc
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42465 4 +     51645 tttc
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411039 4 - 187317192 TTTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395922 4 +  25927173 TTTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45054 4 -     62418 tttc
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21741 4 +     24253 tttc
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41498 4 +     59329 tttc
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267330 4 +    668171 tttc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18676 4 +     21031 tttc
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32408 4 +     33478 tttc
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219644 4 -    270270 atcc
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                        318806 4 +  24302211 tttc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353638 4 -    752769 tttc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670289 4 -    737560 tttc
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                             217583 4 +    317179 tttc
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Marmota_marmota.CZRN01000018.1                           7489746 2 +  40650429 G--C
i Marmota_marmota.CZRN01000018.1                         I 1 I 737
s Megaderma_lyra.MegLyr_scaffold_4542                       146724 4 +    207569 tttc
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             14987 4 -     74585 tttc
i Mellivora_capensis.MelCap_flattened_line_19308         I 176 C 0
s Mico_argentatus.k141_582562                                 6761 4 +     17804 tctc
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7534 4 -     12984 tctc
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15496 4 -     26561 tctc
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981340 4 +  93316391 TTTC
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180990 4 +    200668 tttc
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         18796 4 -     27822 tttc
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5073 4 +     27589 tttc
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 209 C 0
s Mirza_zaza.k141_766280                                     49201 4 -     62432 tttc
i Mirza_zaza.k141_766280                                 I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175165 4 +    366855 tttc
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14726 4 -     63510 tttc
i Mungos_mungo.MunMun_flattened_line_18455               I 1 C 0
s Murina_feae.MurFea_scaffold_17764                          34076 4 +     47283 tttg
i Murina_feae.MurFea_scaffold_17764                      I 1 C 0
s Mustela_putorius.JH418006.1                             14344019 4 +  14710649 tttc
i Mustela_putorius.JH418006.1                            I 171 C 0
s Myotis_brandtii.KE162005.1                               9788524 4 +  10118263 tttg
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                4378936 4 +   6019432 tttg
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                               378755 4 +   4330536 tttg
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        2475 4 +      3929 tttg
i Myotis_myotis.MyoMyo_scaffold_185951                   I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116503 4 +    130748 tttc
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 1 C 0
s Nasalis_larvatus.k141_1350636                              25098 4 +     34575 tttc
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465458 4 -  31847680 tttc
i Neomonachus_schauinslandi.NINY01007730.1               I 209 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   123599 4 -    149072 tttc
i Noctilio_leporinus.NocLep_scaffold_7894                I 1 C 0
s Nomascus_annamensis.k141_1771965                           50045 4 -    132029 ttcc
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6141 4 -     16345 ttcc
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12024 4 +     22201 ttcc
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410361 4 -  22158432 ttcc
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22424 4 -     54323 ttcc
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194866 4 +   9404916 tttc
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 248 C 0
s Nycticebus_bengalensis.LG01                             93631504 4 + 196305487 tttt
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_8166032                              893 4 +      2758 tttt
i Nycticebus_coucang.k141_8166032                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559771 4 - 199412804 tttt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Odobenus_rosmarus.KB229312.1                             1448242 4 +   2017862 tttc
i Odobenus_rosmarus.KB229312.1                           I 213 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35913 4 +    559221 tttc
i Otocyon_megalotis.JAEUCK010005147.1                    I 232 C 0
s Otolemur_crassicaudatus.k141_85057                         22995 4 -     23432 TTTC
i Otolemur_crassicaudatus.k141_85057                     I 1 C 0
s Otolemur_garnettii.GL873799.1                             347560 4 +   1103335 TTTC
i Otolemur_garnettii.GL873799.1                          I 1 C 0
s Pan_troglodytes.CM009242.2                               1468255 4 - 189151597 TTCC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20777 4 -    230217 tttc
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                              18458103 4 -  18783137 tttc
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               3968829 4 +   8748460 tttc
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                   239650 4 - 183742232 TTTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6117 4 +     21308 tttc
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287154 4 -  20919399 tttc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18770 4 -     27687 tttc
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11906 4 +     16796 tttc
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18716 4 -     23640 tttc
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11709 4 +     78924 tttc
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_1921260                          21607 4 +     31479 tttc
i Perodicticus_ibeanus.k141_1921260                      I 1 C 0
s Perodicticus_potto.k141_1854441                            13978 4 -     24908 tttc
i Perodicticus_potto.k141_1854441                        I 1 C 0
s Piliocolobus_badius.k141_2495623                            5552 4 +      7560 tttc
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61259 4 -     63152 tttc
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43858 4 +     45295 tttc
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1537 4 +      5735 TTTC
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46339 4 +     46691 tttg
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        I 1 C 0
s Pithecia_albicans.k141_1239476                             61730 4 +    207309 tttc
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2850 4 -     25401 tttc
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28565 4 +     58159 tttc
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28841 4 +     63561 tttc
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28604 4 +     51148 tttc
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553597 4 -   4542175 tttc
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28588 4 +     51125 tttc
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5006 4 +     39866 tttc
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                            93 4 -      9282 tttc
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39494 4 -     87950 tttc
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39887 4 -     88961 tttc
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4586 4 -     39403 tttc
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39540 4 +     87928 tttc
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4584 4 -     60166 tttc
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11520 4 -     67232 tttc
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39436 4 -     90634 tttc
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40904 4 +     89403 tttc
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173872 4 - 189387572 ttcc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188870 4 -   9816681 ttcc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24035 4 +     69807 tttc
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41230 4 -     80239 tttc
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980239 4 +   4620579 tttc
i Prolemur_simus.MPIZ01000396.1                          I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562818 4 -   2598838 TTTC
i Propithecus_coquerelli.NW_012148875.1                  I 1 C 0
s Propithecus_coronatus.k141_209299                            460 4 -      7103 tttc
i Propithecus_coronatus.k141_209299                      I 1 C 0
s Propithecus_diadema.k141_153680                             1060 4 -     11706 tttc
i Propithecus_diadema.k141_153680                        I 1 C 0
s Propithecus_edwardsi.k141_635656                            4795 4 -     30655 tttc
i Propithecus_edwardsi.k141_635656                       I 1 C 0
s Propithecus_perrieri.k141_1496898                          31120 4 +     46564 tttc
i Propithecus_perrieri.k141_1496898                      I 1 C 0
s Propithecus_tattersalli.k141_1127767                       91411 4 -     98465 tttc
i Propithecus_tattersalli.k141_1127767                   I 1 C 0
s Propithecus_verreauxi.k141_1047036                          5029 4 +     35169 tttc
i Propithecus_verreauxi.k141_1047036                     I 1 C 0
s Pteronotus_parnellii.KE847780.1                            48227 4 -     66298 tttc
i Pteronotus_parnellii.KE847780.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          5125 4 -     10349 tttc
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 173 C 0
s Pteropus_alecto.KB030862.1                               5837147 4 -  28871421 atcc
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             3533722 4 -   4952924 atcc
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            18095655 4 +  38429054 tttc
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             23423 4 +     91421 tttt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  149915 4 -   7812017 tttt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4292 4 +     72585 tttt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909811 4 +   3329780 tttc
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_221883                            25256 4 +     27361 tttc
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118606 4 + 195417433 TTTC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232864 4 -   7961872 tttc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71192 4 -    116970 attc
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 1 C 0
s Saguinus_bicolor.k141_1429097                                711 4 +     27962 tttc
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              724 4 +      6077 tttc
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              739 4 +      5971 tttc
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                793 4 +      5932 tttc
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               939 4 -      2099 tttc
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387970 4 - 209938924 tttc
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 740 4 +      5979 tttc
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1123 4 -      4301 tttc
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235174 4 +   5703754 tttc
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4764 4 +     21866 tttc
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112921 4 +    313613 tttc
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_158471                         21744 4 +     27374 ttta
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25261 4 +     58920 ttta
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11756 4 -     45317 ttta
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19413 4 -     42441 ttta
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22095 4 -     29113 ttta
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25167 4 -     48123 ttta
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854880 4 -   1910179 TTTC
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1856987 2 +   3870691 G--C
i Spermophilus_dauricus.KZ294078.1                       I 1 I 699
s Spilogale_gracilis.SpiGra_flattened_line_13525              3303 4 -     97271 tttc
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 23 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121320 4 +    196729 tttc
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Symphalangus_syndactylus.tarseq_199                       387342 4 +   1523678 tccc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1376 4 -      2009 tttc
i Tamandua_tetradactyla.TamTet_scaffold_445853           I 1 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187976 4 +    199430 tttc
i Tapirus_indicus.TapInd_scaffold_7432                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101931 4 -    539355 tttc
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_1780720                                4059 4 +      6850 ttta
i Tarsius_lariang.k141_1780720                           I 1 C 0
s Tarsius_wallacei.k141_226975                                4098 4 +     20590 ttta
i Tarsius_wallacei.k141_226975                           I 1 C 0
s Theropithecus_gelada.CM009954.1                           349635 4 - 186847797 tttt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16721 4 -     31044 tttc
i Tolypeutes_matacus.TolMat_scaffold_31955               I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476043 4 -    610378 tttc
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_1189070                        17308 4 +     26378 ttta
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29989 4 -     78344 ttta
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16629 4 +     25722 ttta
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24852 4 -     62838 ttta
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24969 4 +     46913 ttta
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5779 4 -     28527 ttta
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26791 4 -     64340 ttta
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24828 4 -     63452 ttta
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6270 4 +     22490 ttta
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3890 4 +      4141 ttta
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6696 4 -     13050 ttta
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251931 4 -   6242583 ttta
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57663 4 +     59866 ttta
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1829635 4 -   4065304 tttc
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4178 4 -     70247 tttc
i Tupaia_tana.TupTan_flattened_line_394                  I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104143 4 -    105689 tttc
i Uropsilus_gracilis.UroGra_scaffold_7153                I 1 C 0
s Ursus_maritimus.KK499267.1                                178188 4 +   5085361 tttc
i Ursus_maritimus.KK499267.1                             I 217 C 0
s Varecia_rubra.k141_787544                                  21879 4 -     30710 tttc
i Varecia_rubra.k141_787544                              I 1 C 0
s Varecia_variegata.k141_289850                              20786 4 -    147434 tttc
i Varecia_variegata.k141_289850                          I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101631 4 -    112863 tttc
i Vulpes_lagopus.VulLag_flattened_line_12041             I 266 C 0
s Xerus_inauris.XerIna_scaffold_2302                        163138 2 -    224448 G--C
i Xerus_inauris.XerIna_scaffold_2302                     I 1 I 743
s Zalophus_californianus.ZalCal_flattened_line_17732         25462 4 -     86975 tttc
i Zalophus_californianus.ZalCal_flattened_line_17732     I 213 C 0
e Allochrocebus_solatus.k141_3554717                         14582 0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904 0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39077361 28 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1016 8 +     36723 ACTT-TTTG
s Acinonyx_jubatus.LLWD01001279.1                           809405 8 +   1699592 tctg-ttag
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 25
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411502 8 +  29979442 tctt-ctag
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 19
s Allenopithecus_nigroviridis.k141_3755588                   44311 8 +     53615 gctt-tttg
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40126 8 +     44087 gctt-tttg
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             69053 8 -     84148 actt-tttg
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41276 8 -     78289 actt-tttg
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40724 8 +     55831 actt-tttg
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39165 8 -     64179 actt-tttg
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20808 8 -     24835 actt-tttg
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37791 8 +     45454 actt-tttg
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43490 8 +     70886 actt-tttg
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5617 8 +     30854 actt-tttg
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29756 8 +     42133 actt-tttg
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173017 8 -    412891 tctt-ttag
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 19
s Aotus_azarae.k141_118258                                   47565 8 -     65372 actt-tttg
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41311 8 +     43593 actt-tttg
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669323 8 +   5030052 ACTT-TTTG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20965 8 -     23494 actt-tttg
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6101 8 +      8415 actt-tttg
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16169 8 -     45910 gctt-tttg
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   846 8 -     15198 tttt-ttag
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 19
s Ateles_geoffroyi_b.tarseq_1536                               271551 8 +  21539123 actt-tttg
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7722 8 +     48076 actt-tttg
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2856 8 -     28759 actt-tttg
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30408 8 +     44353 actt-tttg
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45783 8 -     71267 actt-tttg
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19839 8 -     33135 actt-tttg
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2953 8 +     11645 tctt-tttg
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2955 8 -     19611 tctt-tttg
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4743 8 +     28062 agtt-tttg
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40037 8 -     91139 agtt-tttg
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17563 8 +     95584 agtt-tttg
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17476 8 +    119600 agtt-tttg
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6981 7 +     18648 ac-t-tttg
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6657 7 -     13885 ac-t-ttag
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15343 7 +     17162 ac-t-tttg
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450299 7 + 189096842 AC-T-TTTG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16592 7 -     18408 ac-t-tttg
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42501984 8 +  60362399 tctt-ttag
i CanFam4.chr16                                          C 0 I 16
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5614 8 -     23171 tctt-ttag
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 16
s Canis_lupus_dingo.QKWQ01000480.1                          218975 8 +   9314153 tctt-ttag
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 16
s Canis_lupus_familiaris.chr16                            41612100 8 +  59632846 tctt-ttag
i Canis_lupus_familiaris.chr16                           C 0 I 16
s Canis_lupus_orion.HG994398.1                            45103670 8 -  63665305 tctt-ttag
i Canis_lupus_orion.HG994398.1                           C 0 I 16
s Carlito_syrichta.NW_007259797.1                           267372 8 +    496798 TCAT-TTTG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                905 8 +      5315 cttt-ttag
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 19
s Cebuella_niveiventris.k141_592277                           1877 7 -     12580 ac-t-tttg
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39763 7 +     53515 ac-t-tttg
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367955 8 -  26074798 attt-tttg
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4844 8 -     34880 attt-tttg
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63939 8 -     89041 attt-tttg
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            539 8 -      1636 tcat-tttg
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488960 8 -  27778364 tctg-ttag
i Ceratotherium_simum.JH767749.1                         C 0 I 19
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15793 8 +     27315 tctg-ttag
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 19
s Cercocebus_atys.KQ010504.1                                137471 8 -   4669795 GCTT-TTTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41212 8 +     47900 gctt-tttg
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41044 8 -     44860 gctt-tttg
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41026 8 -    148725 gctt-tttg
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24085 8 -     40656 gctt-tttg
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4020 8 +     20796 gctt-tttg
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8275 8 -     17524 gctt-tttg
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23964 8 -     34525 gctt-tttg
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8675 8 -     25376 gctt-tttg
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361240 8 -  39242232 gctt-tttg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266985 8 +  21565898 gctt-tttg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28438 8 -     45857 gctt-tttg
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24229 8 -     32606 gctt-tttg
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          416 8 +      8499 gctt-tttg
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21928 8 +     70610 gctt-tttg
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18793 8 +     36323 gctt-tttg
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9743 8 -     19938 tctt-tttg
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             27371 8 -     33796 tttt-cttg
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1566 8 -     15404 tttt-cttg
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5836 8 -     32913 actt-tttg
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16249 8 -     40346 actt-tttg
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16513 8 +    216457 actt-tttg
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16292 8 +     39636 actt-tttg
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            717 7 +      5346 actt-t-tg
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39384 8 -    112038 agtt-tttg
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           4956 8 +     34062 agtt-tttg
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339689 8 +  18827391 gctt-tttg
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6300 8 -     44032 gctt-tttg
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301015 8 - 135778131 GCTT-TTTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405564 8 -   2368649 GCTT-TTTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374723 8 - 200372422 gctt-tttg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5448 8 -      6605 gctt-tttg
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803871 8 +  53390261 tctg-ttaa
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9255 8 +     10921 tcct-tgag
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 I 19
s Cryptoprocta_ferox.CryFer_flattened_line_16129               645 8 +     87169 tttg-ttag
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 19
s Dasypus_novemcinctus.JH564415.1                          2105947 8 -   2246927 tctt-tctg
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289403 8 +  12879189 tctt-tttg
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661247 8 -   1390856 tctg-ttag
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 19
s Diceros_bicornis.DicBicMic_scaffold_5955                  136036 8 -    198055 tctg-ttag
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 19
s Eidolon_helvum.AWHC01266696.1                               2593 8 +     19438 tctt-ttaa
i Eidolon_helvum.AWHC01266696.1                          C 0 I 19
s Enhydra_lutris.KZ291758.1                               24906970 5 +  41312741 tct-tg---
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12574174 8 +  14770903 tctt-ttag
i Eptesicus_fuscus.JH977646.1                            C 0 I 19
s Equus_asinus.JREZ01000139.1                              3038218 8 -   4378816 cctt-ttag
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21372152 8 +  39960074 cctt-ttag
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              408938 8 -    498745 cctt-ttag
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               259247 8 +  21539334 actt-tttg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12367 8 -     24895 tctt-tttg
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40079 8 -     70999 tctt-tttg
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84039 8 +    112731 tctt-tttg
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40611 8 +     68309 tctt-tttg
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50936 8 -     65740 tctt-tttg
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21566 8 -     75513 tctt-tttg
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45759 8 -     97555 tctt-tttg
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2486 8 +     30972 tctt-tttg
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40209 8 -     52037 tctt-tttg
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56610 8 -    111500 tctt-tttg
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186243063 8 - 206538554 tctg-ttag
i Felis_catus.CM001381.2                                 C 0 I 25
s Felis_catus_fca126.CM031415.1                          185112845 8 - 205367284 tctg-ttag
i Felis_catus_fca126.CM031415.1                          C 0 I 25
s Felis_nigripes.FelNig_flattened_line_31944                 24193 8 -     30238 tctg-ttag
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 25
s Galago_moholi.ctg3793                                     119724 8 -    137831 GCTT-TTTG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3264 8 +     22493 GCTT-TTTG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16733 8 +     32986 ACTT-TTTG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15568 8 +     18121 tctt-tttg
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1370 8 -      8343 actt-tttg
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250870 8 - 186649187 actt-tttg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12296 8 -     40692 tctt-tttg
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33698 8 +     49394 tctt-tttg
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58566 8 -     66874 tctt-tttg
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7443 8 -     42923 tctt-tttg
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14439 8 -     53142 tctt-tttg
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26961 8 -    327341 tcag-ttag
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 19
s Hipposideros_armiger.JXIK01000431.1                      1546491 8 -   1711038 tatt-ttag
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 19
s Hipposideros_galeritus.HipGal_scaffold_23202               45809 8 +     49977 tctt-ttaa
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 19
s Hoolock_leuconedys.ctg274                                    138764 8 -    630532 actt-tttg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65639 8 +     83186 tctg-ttag
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 19
s Hylobates_agilis.k141_1155965                               1797 8 +     12352 actt-tttg
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8980 8 +     55766 actt-tttg
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048319 8 + 191637585 gctt-tttg
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797651 8 +  11177569 gctt-tttg
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     376344 8 +   7955117 ATGT-CTTA
i Ictidomys_tridecemlineatus.JH393364.1                  I 688 C 0
s Indri_indri.k141_1634743                                     708 8 -      1784 tctt-tttg
i Indri_indri.k141_1634743                               I 268 I 138
s Lagothrix_lagothricha.k141_246028                          40098 8 +    110728 actt-tttg
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757087 8 +  30322482 tctt-tttg
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         798 7 -     13097 ac-t-tttg
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            749 7 +      5940 ac-t-tttg
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         380 7 -      5717 ac-t-tttg
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7004 7 -     11567 ac-t-tttg
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8385 7 -     12945 ac-t-tttg
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5736 8 +     29618 tctt-tttg
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5733 8 +     31569 tctt-tttg
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5746 8 +     24756 cctt-tttg
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5738 8 +     16388 tctt-tttg
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810067 8 -   3914936 tctt-ttag
i Leptonychotes_weddellii.KB714746.1                     C 0 I 19
s Lophocebus_aterrimus.ctg367                               329427 8 -   1826925 gctt-tttg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2734 8 +     19643 gctt-tttg
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036392 8 -   6120653 gctt-tttg
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611255 8 +  59628241 tctt-ttag
i Lycaon_pictus.CM007581.1                               C 0 I 16
s Macaca_arctoides.k141_1757516                              41707 8 -     61512 gctt-tttg
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369335 8 -  60120075 gctt-tttg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21655 8 +     30207 gctt-tttg
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18758 8 -     24934 gctt-tttg
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21542 8 +     30527 gctt-tttg
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32731 8 -     50087 gctt-tttg
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42469 8 +     51645 gctt-tttg
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411043 8 - 187317192 GCTT-TTTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395926 8 +  25927173 GCTT-TTTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45058 8 -     62418 gctt-tttg
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21745 8 +     24253 gctt-tttg
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41502 8 +     59329 gctt-tttg
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267334 8 +    668171 gctt-tttg
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18680 8 +     21031 gctt-tttg
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32412 8 +     33478 gctt-tttg
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219648 8 -    270270 tctt-ttaa
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 14
s Mandrillus_leucophaeus.scaffold280                        318810 8 +  24302211 actt-tttg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353642 8 -    752769 actt-tttg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670293 8 -    737560 tctt-ttag
i Manis_javanica.JSZB01003497.1                          C 0 I 16
s Manis_pentadactyla.KN006162.1                             217587 8 +    317179 tctt-ttag
i Manis_pentadactyla.KN006162.1                          C 0 I 16
s Marmota_marmota.CZRN01000018.1                           7490485 8 +  40650429 attt-ctta
i Marmota_marmota.CZRN01000018.1                         I 737 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146728 8 +    207569 tctt-ttac
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 19
s Mellivora_capensis.MelCap_flattened_line_19308             14991 8 -     74585 tct-tttag
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 19
s Mico_argentatus.k141_582562                                 6765 7 +     17804 ac-t-tttg
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7538 7 -     12984 ac-t-tttg
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15500 7 -     26561 ac-t-tttg
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981344 8 +  93316391 TTAT-TTTG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                180994 8 +    200668 tctt-ttag
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 12
s Miopithecus_ogouensis.k141_1534655                         18800 8 -     27822 gctt-tttg
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5077 8 +     27589 tctt-ttag
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 19
s Mirza_zaza.k141_766280                                     49205 8 -     62432 ctat-tttg
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175169 8 +    366855 tctt-ttag
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 19
s Mungos_mungo.MunMun_flattened_line_18455                   14730 8 -     63510 tctt-ttag
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 19
s Murina_feae.MurFea_scaffold_17764                          34080 8 +     47283 tctt-ttag
i Murina_feae.MurFea_scaffold_17764                      C 0 I 16
s Mustela_putorius.JH418006.1                             14344023 8 +  14710649 tct-tttag
i Mustela_putorius.JH418006.1                            C 0 I 19
s Myotis_brandtii.KE162005.1                               9788528 8 +  10118263 tctt-ttag
i Myotis_brandtii.KE162005.1                             C 0 I 19
s Myotis_davidii.KB100139.1                                4378940 8 +   6019432 tctt-ttag
i Myotis_davidii.KB100139.1                              C 0 I 19
s Myotis_lucifugus.GL429869.1                               378759 8 +   4330536 tctt-ttag
i Myotis_lucifugus.GL429869.1                            C 0 I 19
s Myotis_myotis.MyoMyo_scaffold_185951                        2479 8 +      3929 tctt-ttag
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 I 19
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116507 8 +    130748 tctt-tttg
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              25102 8 +     34575 gctt-tttg
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465462 8 -  31847680 tctt-ttag
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 19
s Noctilio_leporinus.NocLep_scaffold_7894                   123603 8 -    149072 tctt-ttaa
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 19
s Nomascus_annamensis.k141_1771965                           50049 8 -    132029 gctt-tttg
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6145 8 -     16345 gctt-tttg
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12028 8 +     22201 gctt-tttg
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410365 8 -  22158432 gctt-tttg
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22428 8 -     54323 gctt-tttg
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194870 8 +   9404916 tctt-ttag
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 16
s Nycticebus_bengalensis.LG01                             93631508 8 + 196305487 gctt-tttg
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              897 8 +      2758 gctt-tttg
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559775 8 - 199412804 gctt-tttg
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448246 8 +   2017862 tctt-ttag
i Odobenus_rosmarus.KB229312.1                           C 0 I 19
s Otocyon_megalotis.JAEUCK010005147.1                        35917 8 +    559221 tctt-ttag
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 16
s Otolemur_crassicaudatus.k141_85057                         22999 8 -     23432 ACTT-TTTG
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347564 8 +   1103335 ACTT-TTTG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468259 8 - 189151597 ACTT-TTTG
i Pan_troglodytes.CM009242.2                             C 0 I 60
s Panthera_onca.PanOnc_flattened_line_3271                   20781 8 -    230217 tctg-ttag
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 25
s Panthera_pardus.KV860321.1                              18458107 8 -  18783137 tctg-ttag
i Panthera_pardus.KV860321.1                             C 0 I 25
s Panthera_tigris.KE722367.1                               3968833 8 +   8748460 tctg-ttag
i Panthera_tigris.KE722367.1                             C 0 I 25
s Papio_anubis.CM001495.2                                   239654 8 - 183742232 GCTT-TTTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6121 8 +     21308 gctt-tttg
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287158 8 -  20919399 gctt-tttg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18774 8 -     27687 gctt-tttg
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11910 8 +     16796 gctt-tttg
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18720 8 -     23640 gctt-tttg
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11713 8 +     78924 actg-ttag
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 19
s Perodicticus_ibeanus.k141_1921260                          21611 8 +     31479 tctt-tttg
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13982 8 -     24908 tctt-tttg
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5556 8 +      7560 gctt-tttg
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61263 8 -     63152 gctt-tttg
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43862 8 +     45295 gctt-tttg
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1541 8 +      5735 GCTT-TTTG
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46343 8 +     46691 tctt-ttag
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 I 19
s Pithecia_albicans.k141_1239476                             61734 8 +    207309 agtt-tttg
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2854 8 -     25401 agtt-tttg
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28569 8 +     58159 agtt-tttg
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28845 8 +     63561 agtt-tttg
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28608 8 +     51148 agtt-tttg
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553601 8 -   4542175 agtt-tctg
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28592 8 +     51125 agtt-tttg
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5010 8 +     39866 actt-tctg
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                            97 8 -      9282 actt-tctg
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39498 8 -     87950 actt-tctg
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39891 8 -     88961 actt-tctg
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4590 8 -     39403 actt-tctg
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39544 8 +     87928 actt-tctg
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4588 8 -     60166 actt-tctg
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11524 8 -     67232 actt-tctg
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39440 8 -     90634 actt-tctg
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40908 8 +     89403 actt-tctg
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173876 8 - 189387572 actt-tttg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188874 8 -   9816681 actt-tttg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24039 8 +     69807 gctt-tttg
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41234 8 -     80239 gctt-tttg
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980243 8 +   4620579 tctt-tttg
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562822 8 -   2598838 TCTT-TTTG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            464 8 -      7103 tctt-tttg
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1064 8 -     11706 tctt-tttg
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4799 8 -     30655 tctt-tttg
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31124 8 +     46564 tctt-tttg
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91415 8 -     98465 tctt-tttg
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5033 8 +     35169 tctt-tttg
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48231 8 -     66298 tctt-ttag
i Pteronotus_parnellii.KE847780.1                        C 0 I 19
s Pteronura_brasiliensis.PteBra_flattened_line_59017          5129 8 -     10349 tct-tttag
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 I 19
s Pteropus_alecto.KB030862.1                               5837151 8 -  28871421 tctt-ttaa
i Pteropus_alecto.KB030862.1                             C 0 I 19
s Pteropus_vampyrus.KN525825.1                             3533726 8 -   4952924 tctt-ttaa
i Pteropus_vampyrus.KN525825.1                           C 0 I 19
s Puma_concolor.QAVW01001104.1                            18095659 8 +  38429054 tctg-ttag
i Puma_concolor.QAVW01001104.1                           C 0 I 25
s Pygathrix_cinerea.k141_1153803                             23427 8 +     91421 gctt-tttg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  149919 8 -   7812017 gctt-tttg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4296 8 +     72585 gctt-tttg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909815 8 +   3329780 tctt-tcag
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 19
s Rhinopithecus_bieti.k119_221883                            25260 8 +     27361 gctt-tttg
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118610 8 + 195417433 GCTT-TTTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232868 8 -   7961872 gctt-tttg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71196 8 -    116970 tctt-tgaa
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 19
s Saguinus_bicolor.k141_1429097                                715 7 +     27962 ac-t-tttg
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              728 7 +      6077 ac-t-tttg
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              743 7 +      5971 ac-t-tttg
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                797 7 +      5932 ac-t-tttg
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               943 7 -      2099 ac-t-tttg
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387974 7 - 209938924 ac-t-tttg
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 744 7 +      5979 ac-t-tttg
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1127 7 -      4301 ac-t-tttg
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235178 8 +   5703754 attt-tttg
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4768 8 +     21866 attt-tttg
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112925 8 +    313613 tctt-gtaa
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21748 8 +     27374 gctc-tttg
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25265 8 +     58920 gctc-tttg
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11760 8 -     45317 gctc-tttg
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19417 8 -     42441 gctc-tttg
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22099 8 -     29113 gctc-tttg
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25171 8 -     48123 gctc-tttg
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1854884 8 -   1910179 TCTT-ATAT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 736
s Spermophilus_dauricus.KZ294078.1                         1857688 8 +   3870691 attt-ctta
i Spermophilus_dauricus.KZ294078.1                       I 699 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3307 7 -     97271 tct--ttag
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 19
s Suricata_suricatta.SurSur_flattened_line_6629             121324 8 +    196729 tctg-ttag
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 19
s Symphalangus_syndactylus.tarseq_199                       387346 8 +   1523678 gctt-tttg
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1380 8 -      2009 tatt-tttg
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      187980 8 +    199430 tctg-ttag
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 19
s Tapirus_terrestris.TapTer_scaffold_755                    101935 8 -    539355 tctg-ttag
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4063 8 +      6850 tcat-tttg
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4102 8 +     20590 tcat-tttg
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349639 8 - 186847797 gctt-tttg
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16725 8 -     31044 tctt-tttg
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476047 8 -    610378 tctt-ttag
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 19
s Trachypithecus_auratus.k141_1189070                        17312 8 +     26378 gctc-tttg
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     29993 8 -     78344 gctc-tttg
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16633 8 +     25722 gctc-tttg
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24856 8 -     62838 gctc-tttg
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24973 8 +     46913 gctc-tttg
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5783 8 -     28527 gctc-tttg
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26795 8 -     64340 gctc-tttg
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24832 8 -     63452 gctc-tttg
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6274 8 +     22490 gctc-tttg
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3894 8 +      4141 gctc-tttg
i Trachypithecus_melamera.k141_324021                    C 0 I 20
s Trachypithecus_obscurus.k141_848057                         6700 8 -     13050 gctc-tttg
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251935 8 -   6242583 gctc-tttg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57667 8 +     59866 gctc-tttg
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1829639 8 -   4065304 tctt-tctg
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4182 8 -     70247 tctt-tctg
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104147 8 -    105689 tctt-gtaa
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178192 8 +   5085361 tctt-ttgg
i Ursus_maritimus.KK499267.1                             C 0 I 19
s Varecia_rubra.k141_787544                                  21883 8 -     30710 tctt-tttg
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20790 8 -    147434 tctt-tttg
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101635 8 -    112863 tctt-ttag
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 16
s Xerus_inauris.XerIna_scaffold_37001                         2218 7 +     36740 aatt-ttt-
i Xerus_inauris.XerIna_scaffold_37001                    n 743 n 743
s Zalophus_californianus.ZalCal_flattened_line_17732         25466 8 -     86975 tctt-ttag
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 19
e Allochrocebus_solatus.k141_3554717                         14582 0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904 0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39077361 28 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1024 60 +     36723 AA-----------------------TATCTTGT----AAGTA-----ATG-GG---CCA----CTG-TATC-TTGGCAT-TAAATTTTGCT---AGG-A-A----AA-----A-A-------T-A--T
s Acinonyx_jubatus.LLWD01001279.1                           809438 42 +   1699592 ----------------------------------------------------t---ctg----ttg-tatt-ttggtgc-taaatgttgct---g-t-g-a----aaa--g-a-a-------t-a--c
i Acinonyx_jubatus.LLWD01001279.1                        I 25 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411529 42 +  29979442 ----------------------------------------------------t---cca----ctg-tatttttggtat-aaaatggtgct---g-t-g-a----aaaa---a-a-------t-g---
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 19 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44319 60 +     53615 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40134 60 +     44087 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             69061 61 -     84148 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41284 61 -     78289 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40732 61 +     55831 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39173 61 -     64179 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20816 61 -     24835 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37799 61 +     45454 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43498 61 +     70886 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5625 61 +     30854 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29764 61 +     42133 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173044 42 -    412891 ----------------------------------------------------t---gca----ctg-catg-ttggcat-tgaatgttgct---g-t-g-g----aaaa---a-a-------t-a--t
i Anoura_caudifer.AnoCau_scaffold_1412                   I 19 C 0
s Aotus_azarae.k141_118258                                   47573 61 -     65372 aa-----------------------aagctcgt----aagta-----ttg-tg---cca----ctg-tgtc-ctggcat-tacattttgct---agg-a-a----aa-----aaa-------t-a--t
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41319 61 +     43593 aa-----------------------aagctcgt----aagta-----ttg-tg---cca----ctg-tgtc-ttggcat-tacattttgct---agg-a-a----aa-----aaa-------t-a--t
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669331 61 +   5030052 AA-----------------------AAGCTCGT----AAGTA-----TTG-TG---CCA----CTG-TGTC-TTGGCAT-TACATTTTGct---agg-a-a----aa-----aaa-------t-a--t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              20973 61 -     23494 aa-----------------------aagctcgt----aagta-----ttg-tg---cca----ctg-tgtc-ttggcat-tacattttgct---agg-a-a----aa-----aaa-------t-a--t
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6109 61 +      8415 aa-----------------------aagctcgt----aagta-----ttg-tg---cca----ctg-tgtc-ttggcat-tacattttgct---agg-a-a----aa-----aaa-------t-a--t
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16177 60 -     45910 aa-----------------------tatcttgt----agaga-----ttg-gt---cga----ctg-tatt-ttggtat-taactattgtt---agg-g-a----aa-----g-c-------t-a--t
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   873 41 -     15198 ----------------------------------------------------t---g-a----cag-tatg-ttggcat-tgaatgttgct---g-t-g-g----aaaa---a-a-------t-a--t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 19 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271559 61 +  21539123 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tgtc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7730 61 +     48076 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tgtc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2864 61 -     28759 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tgtc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30416 61 +     44353 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tgtc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45791 61 -     71267 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tgtc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19847 61 -     33135 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tgtc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  2961 60 +     11645 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----cta-tatt-ttggcat-taaatattgct---agg-g-c----aa-----a-c-------t-a--t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               2963 60 -     19611 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----cta-tatt-ttggcat-taaatattgct---agg-g-c----aa-----a-c-------t-a--t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4751 61 +     28062 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taaattttgct---agg-a-a----ac-----aca-------c-a--t
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40045 61 -     91139 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taaattttgct---agg-a-a----ac-----aca-------c-a--t
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17571 61 +     95584 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taaattttgct---agg-a-a----ac-----aca-------c-a--t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17484 61 +    119600 aa-----------------------aagcttgt----aagta-----ttg-tc---cca----cag-tgtc-ttggcat-taaattttgct---agg-a-a----ac-----aca-------c-a--t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             6988 60 +     18648 aa-----------------------aagcttgt----aagta-----ttg-tg---ccg----ctg-tgtc-ttggcat-tacattttgct---agg-aaa----aa-----a-a-------t-a---
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6664 59 -     13885 aa-----------------------aagcttgt----aagtg-----ttg-tg---ctg----ctg-tgtc-ttggcat-tacactttgct---agg-a-a----aa-----a-a-------t-a---
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15350 60 +     17162 aa-----------------------aagcttgt----aagta-----ttg-tg---ccg----ctg-tgtc-ttggcat-tacattttgct---agg-aaa----aa-----a-a-------t-a---
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450306 60 + 189096842 AA-----------------------AAGCTTGT----AAGTA-----TTG-TG---CCG----CTG-TGTC-TTGGCAT-TACATTTTGCT---AGC-AAA----AA-----A-A-------T-A---
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16599 60 -     18408 aa-----------------------aagcttgt----aagta-----ttg-tg---ccg----ctg-tgtc-ttggcat-tacattttgct---agc-aaa----aa-----a-a-------t-a---
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502008 42 +  60362399 ----------------------------------------------------t---tca----ctg-tatttttggttt-taaatgctgtt---g-t-g-a----aaaa---a-a-------t-a---
i CanFam4.chr16                                          I 16 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5638 42 -     23171 ----------------------------------------------------t---tca----ctg-tatttttggttt-taaatgctgtt---g-t-g-a----aaaa---a-a-------t-a---
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 16 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          218999 42 +   9314153 ----------------------------------------------------T---TCa----ctg-tatttttggttt-taaatgcTGTT---G-T-G-A----AA---AAA-A-------T-A---
i Canis_lupus_dingo.QKWQ01000480.1                       I 16 C 0
s Canis_lupus_familiaris.chr16                            41612124 42 +  59632846 ----------------------------------------------------t---tca----ctg-tatttttggttt-taaatgctgtt---g-t-g-a----aaaa---a-a-------t-a---
i Canis_lupus_familiaris.chr16                           I 16 C 0
s Canis_lupus_orion.HG994398.1                            45103694 42 -  63665305 ----------------------------------------------------T---TCA----ctg-tatttttggttt-taaatgcTGTT---G-T-G-A----AA---AAA-A-------T-A---
i Canis_lupus_orion.HG994398.1                           I 16 C 0
s Carlito_syrichta.NW_007259797.1                           267380 30 +    496798 CA-----------------------TATCACCC----AAGTA-----CTA-TT---CCT----TTG-TATT---------------------------------------------------------
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                932 42 +      5315 ----------------------------------------------------t---gca----ctg-tatg-ttggcat-tgaatgttgct---g-t-g-a----aaaa---a-a-------t-a--t
i Carollia_perspicillata.CarPer_scaffold_170178          I 19 C 0
s Cebuella_niveiventris.k141_592277                           1884 60 -     12580 aa-----------------------aagcttgt----aagta-----ttg-tg---ccg----ctg-tgtc-ttggcat-tacattttgct---agg-aaa----aa-----a-a-------t-a---
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39770 60 +     53515 aa-----------------------aagcttgt----aagta-----ttg-tg---ccg----ctg-tgtc-ttggcat-tacattttgct---agg-aaa----aa-----a-a-------t-a---
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  367963 61 -  26074798 aa-----------------------aagtttgt----aagca-----ttg-tg---cca----ctg-tgtc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4852 61 -     34880 aa-----------------------aagtttgt----aagca-----ttg-tg---cca----ctg-tgtc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                63947 61 -     89041 aa-----------------------aagtttgt----aagca-----ttg-tg---cca----ctg-tgtc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            547 30 -      1636 ca-----------------------aatcaccc----aagta-----ctg-tt---cct----ttg-tatt---------------------------------------------------------
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15488987 27 -  27778364 ----------------------------------------------------t---ctg----ctg-tgttt-tggcat-tgaatgtgg---------------------------------------
i Ceratotherium_simum.JH767749.1                         I 19 I 8
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15820 27 +     27315 ----------------------------------------------------t---ctg----ctg-tgttt-tggcat-tgaatgtgg---------------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 19 I 8
s Cercocebus_atys.KQ010504.1                                137479 60 -   4669795 AA-----------------------TATCTTGT----AAGTA-----TTG-GG---CCA----CTG-CATC-TTCGCAT-TAAAttttgct---agg-aaa----aa-----a-a-------a-a---
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41220 59 +     47900 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttcgcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41052 59 -     44860 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttcgcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41034 59 -    148725 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttcgcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24093 60 -     40656 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4028 60 +     20796 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8283 60 -     17524 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          23972 60 -     34525 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-g--t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8683 60 -     25376 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361248 60 -  39242232 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  266993 60 +  21565898 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28446 60 -     45857 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctt-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24237 60 -     32606 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          424 60 +      8499 ag-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21936 60 +     70610 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18801 60 +     36323 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9751 56 -     19938 aa-----------------------aagtttgg----aagtg-----ttg-tt---cca----ct-acatt-ttctctt-ttaataat------a-g-c-a----aa-----a-a-------t-c--t
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             27379 64 -     33796 aa-----------------------tatcttgtaagtaagta-----tgt-tt---cca----ctg-tatt-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1574 64 -     15404 aa-----------------------tatcttgtaagtaagta-----tgt-tt---cca----ctg-tatt-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-g--t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5844 61 -     32913 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taacttctgct---agg-a-a----aa-----aca-------t-a--t
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16257 61 -     40346 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taacttctgct---agg-a-a----aa-----aca-------t-a--t
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16521 61 +    216457 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taacttctgct---agg-a-a----aa-----aca-------t-a--t
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16300 61 +     39636 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taacttctgct---agg-a-a----aa-----aca-------t-a--t
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            724 47 +      5346 aa-----------------------aagcttct----aagta-----ttg-tg---ccg----ctg-t-----tggagt-tacattttgct---agg-------------------------------
i Chiropotes_albinasus.k141_1946120                      C 0 I 9
s Chiropotes_israelita.k141_313004                           39392 51 -    112038 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----cag-tgcc-ttggcat-taaattttgct---aga-------------------------------
i Chiropotes_israelita.k141_313004                       C 0 I 9
s Chiropotes_sagulatus.k141_1113111                           4964 51 +     34062 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----cag-tgcc-ttggcat-taaattttgct---aga-------------------------------
i Chiropotes_sagulatus.k141_1113111                      C 0 I 9
s Chlorocebus_aethiops.ctg25                                339697 60 +  18827391 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6308 60 -     44032 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301023 60 - 135778131 AA-----------------------TATCTTGT----AAGTA-----TTG-GG---CCA----CTA-CATC-TTGGCAT-TAAATTTTACT---AGG-A-A----AA-----A-A-------T-A--T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405572 60 -   2368649 AA-----------------------TATCTTGT----AAGTA-----TTG-GG---CCA----CTG-TATC-TTGGCAT-TAAATTTTGCT---AGG-A-A----AA-----A-A-------T-A--T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374731 60 - 200372422 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5456 60 -      6605 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803879 50 +  53390261 ------------------------------------------------gtgttgtccca----ctg-tact-ctgtcat-agaatgttgct---g-t-g-g----aa-----a-a-------TTAAAG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9282 32 +     10921 ----------------------------------------------------t---cca----ttg-tatt-ttggcat-tgaatgttact---g-t-g-----------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 19 I 9
s Cryptoprocta_ferox.CryFer_flattened_line_16129               672 42 +     87169 ----------------------------------------------------t---cca----ctg-tgtt-ttggtgt-taaatgttgct---g-t-g-a----gaaa---a-a-------t-a--c
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 19 C 0
s Dasypus_novemcinctus.JH564415.1                          2105955 60 -   2246927 aa-----------------------aatcttgg----aagtg-----ttg-tt---ccactCACT-ACATT-TTGTCTT-TGAGTAAT------A-G-C-A----AA-----A-A-------T-C--T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289411 60 +  12879189 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tatt-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661274 26 -   1390856 ----------------------------------------------------t---ctg----ctg-tgtt--tggcat-tgaatgtgg---------------------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 19 I 8
s Diceros_bicornis.DicBicMic_scaffold_5955                  136063 27 -    198055 ----------------------------------------------------t---ctg----ctg-tgttt-tggcat-tgaatgtgg---------------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 19 I 8
s Eidolon_helvum.AWHC01266696.1                               2620 42 +     19438 ----------------------------------------------------t---cta----ctg-tatt-tgggcat-tgaatgttgct---g-t-g-g----aaaa---a-a-------t-a--t
i Eidolon_helvum.AWHC01266696.1                          I 19 C 0
s Enhydra_lutris.KZ291758.1                               24906975 42 +  41312741 ----------------------------------------------------t---cca----ctg-tattttcggtgt-taaatgctgct---g-t-g-a----aaaa---a-a-------t-a---
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Eptesicus_fuscus.JH977646.1                             12574201 32 +  14770903 ----------------------------------------------------t---cta----ctg-tatt-ttgtcat-tgaatgttgct---g-t-g-----------------------------
i Eptesicus_fuscus.JH977646.1                            I 19 I 9
s Equus_asinus.JREZ01000139.1                              3038226 19 -   4378816 aa-t---at--cttata-agtgttgt------------------------------------------------------------------------------------------------------
i Equus_asinus.JREZ01000139.1                            C 0 I 35
s Equus_caballus.CM000403.2                               21372160 19 +  39960074 aa--g--at--cttata-agtgttgt------------------------------------------------------------------------------------------------------
i Equus_caballus.CM000403.2                              C 0 I 35
s Equus_przewalskii.KK951119.1                              408946 19 -    498745 aa--g--at--cttata-agtgttgt------------------------------------------------------------------------------------------------------
i Equus_przewalskii.KK951119.1                           C 0 I 35
s Erythrocebus_patas.Contig38                               259255 60 +  21539334 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12375 60 -     24895 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40087 60 -     70999 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84047 60 +    112731 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40619 60 +     68309 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 50944 60 -     65740 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21574 60 -     75513 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttgacat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45767 60 -     97555 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2494 60 +     30972 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40217 60 -     52037 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56618 60 -    111500 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186243096 42 - 206538554 ----------------------------------------------------t---ctg----ttg-tatt-ttggtgc-taaatgttgct---g-t-g-a----aaaa---a-a-------t-a--c
i Felis_catus.CM001381.2                                 I 25 C 0
s Felis_catus_fca126.CM031415.1                          185112878 42 - 205367284 ----------------------------------------------------t---ctg----ttg-tatt-ttggtgc-taaatgttgct---g-t-g-a----aaaa---a-a-------t-a--c
i Felis_catus_fca126.CM031415.1                          I 25 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24226 42 -     30238 ----------------------------------------------------t---ctg----ttg-tatt-ttggtgc-taaatgttgct---g-t-g-a----aaaa---a-a-------t-a--c
i Felis_nigripes.FelNig_flattened_line_31944             I 25 C 0
s Galago_moholi.ctg3793                                     119732 60 -    137831 AA-----------------------TATCTTGT----AGAGA-----TGG-GT---CAA----CTG-TATT-TTGGTAT-TAACTATGGCT---AGG-G-A----AA-----G-C-------T-A--T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3272 60 +     22493 AA-----------------------TATCTTGT----AGAGA-----TGG-GT---CAA----CTG-TATT-TTGGTAT-TAACTATGGCT---AGG-G-A----AA-----G-C-------T-A--T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16741 60 +     32986 AA-----------------------TATCTTGT----AGAGA-----TGG-GT---CAA----CTG-TATT-TTGGTAT-TAACTATTGCT---AGG-G-A----AA-----G-C-------T-A--T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15576 60 +     18121 aa-----------------------tatcttgt----aacta-----tta-tt---cca----ctg-tatt-ttgtcat-tgaatgttgct---aga-g-a----aa-----a-a-------t-a--t
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1378 60 -      8343 aa-----------------------tatcttgt----aggta-----atg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250878 60 - 186649187 aa-----------------------tatcttgt----aagta-----atg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12304 60 -     40692 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33706 60 +     49394 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58574 60 -     66874 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7451 60 -     42923 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14447 60 -     53142 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                26988 42 -    327341 ----------------------------------------------------t---tca----ctg-tatt-ttggtgt-taaatgttgct---g-t-g-a----gaaa---a-a-------t-a--c
i Helogale_parvula.HelPar_flattened_line_2585            I 19 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546518 49 -   1711038 ----------------------------------------------------t---cca----ctg-tatt-ttggcat-tggatgttgct---a-t-g-a----aaaa---a-atatgaaat-a--t
i Hipposideros_armiger.JXIK01000431.1                    I 19 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45836 48 +     49977 ----------------------------------------------------t---cta----ctg-tatt-tttgcat-tggatgtggtt---a-t-g-a----aaa----a-atatgaaat-a--t
i Hipposideros_galeritus.HipGal_scaffold_23202           I 19 C 0
s Hoolock_leuconedys.ctg274                                    138772 60 -    630532 aa-----------------------tatctcgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65666 39 +     83186 ----------------------------------------------------t---cca----ctg-tatt-ttgattt-taaatgtt------g-t-g-a----gaaa---a-a-------t-a--c
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 19 C 0
s Hylobates_agilis.k141_1155965                               1805 60 +     12352 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               8988 60 +     55766 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048327 60 + 191637585 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797659 60 +  11177569 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     376352  8 +   7955117 AA-----------------------TTTTCA-------------------------------------------------------------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 8057
s Indri_indri.k141_4600452                                     450 59 -      1527 aa-----------------------tatcttgt----aagta-----ttg-t----cca----ctg-tatt-ttggcat-taaatatggct---agg-g-a----aa-----a-c-------t-a--t
i Indri_indri.k141_4600452                               I 8 C 0
s Lagothrix_lagothricha.k141_246028                          40106 61 +    110728 aa-----------------------aagcttgt----aagta-----ttg-tg---cca----ctg-tgtc-ttggcat-taaatttggct---agg-a-a----aa-----aaa-------t-a--t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757095 60 +  30322482 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tact-ttggcat-taaatatttct---agg-g-a----aa-----a-c-------t-a--t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         805 56 -     13097 aa-----------------------aagcttct----aagta-----ttg-tg---ccg----ctg-t-----tggagt-tacattttgct---agg-a-a----aa-----a-a-------t-a--t
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            756 56 +      5940 aa-----------------------aagcttct----aagta-----ttg-tg---ccg----ctg-t-----tggagt-tacattttgct---agg-a-a----aa-----a-a-------t-a--t
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         387 56 -      5717 aa-----------------------aagcttct----aagta-----ttg-tg---ccg----ctg-t-----tggagt-tacattttgct---agg-a-a----aa-----a-a-------t-a--t
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7011 60 -     11567 aa-----------------------aagcttgt----aagta-----ttg-tg---ccg----ccg-tgtc-ttggcgt-tacattttgct---agg-a-a----aa-----t-a-------t-a--t
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8392 60 -     12945 aa-----------------------aagcttgt----aagta-----ttg-tg---ccg----ccg-tgtc-ttggcgt-tacattttgct---agg-a-a----aa-----t-a-------t-a--t
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5744 60 +     29618 aa-----------------------tatcttgt----tagta-----ttg-tt---cca----ctg-tatt-ttggcat-taaatatttct---agg-g-a----aa-----a-c-------t-a--t
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5741 60 +     31569 aa-----------------------tatcttgt----tagta-----ttg-tt---cca----ctg-tatt-ttggcat-taaatatttct---agg-g-a----aa-----a-c-------t-a--t
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5754 60 +     24756 aa-----------------------tatcttgt----tagta-----ttg-tt---cca----ctg-tatt-ttggcat-taaatatttct---agg-g-a----aa-----a-c-------t-a--t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5746 60 +     16388 aa-----------------------tatcttgt----tagta-----ttg-tt---cca----ctg-tatt-ttggcat-taaatatttct---agg-g-a----aa-----a-c-------t-a--t
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810094 42 -   3914936 ----------------------------------------------------t---cca----ctg-tatttttggtgt-caaatgctcct---g-t-g-a----aaaa---a-a-------t-a---
i Leptonychotes_weddellii.KB714746.1                     I 19 I 3
s Lophocebus_aterrimus.ctg367                               329435 59 -   1826925 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2742 60 +     19643 aa-----------------------tatcttgt----agaga-----tca-at---caa----ctg-tatt-ttggcat-taactattgct---agg-g-a----aa-----g-c-------t-a--t
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036400 60 -   6120653 aa-----------------------tatcttgt----agaga-----tca-at---caa----ctg-tatt-ttggcat-taactattgct---agg-g-a----aa-----g-c-------t-a--t
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611279 42 +  59628241 ----------------------------------------------------t---tca----ctg-tatttttggttt-taaatgctgct---g-t-g-a----aaaa---a-a-------t-a---
i Lycaon_pictus.CM007581.1                               I 16 C 0
s Macaca_arctoides.k141_1757516                              41715 59 -     61512 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369343 59 -  60120075 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21663 59 +     30207 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18766 59 -     24934 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21550 59 +     30527 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32739 59 -     50087 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42477 59 +     51645 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411051 59 - 187317192 AA-----------------------TATCTTGT----AAGTA-----TTG-GG---CCA----CTG-CATC-TTGGCAT-TAAAttttgct---agg-a-a----aa-----a-a-------a-a---
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395934 59 +  25927173 AA-----------------------TATCTTGT----AAGTA-----TTG-GG---CCA----CTG-CATC-TTGGCAT-TAAAttttgct---agg-a-a----aa-----a-a-------a-a---
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45066 58 -     62418 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---a-g-a-a----aa-----a-a-------a-a---
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21753 59 +     24253 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41510 59 +     59329 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267342 59 +    668171 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18688 59 +     21031 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32420 60 +     33478 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------a-a---
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219670 39 -    270270 ----------------------------------------------------t---c-------tg-tatt-tgggcat-tgaatattgct---g-t-g-g----aaaa---a-a-------t-a--t
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 14 C 0
s Mandrillus_leucophaeus.scaffold280                        318818 59 +  24302211 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353650 59 -    752769 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670317 42 -    737560 ----------------------------------------------------t---cca----ttg-tatt-ttagcat-tgaatgttgct---a-t-g-g----aaaa---a-a-------c-a--c
i Manis_javanica.JSZB01003497.1                          I 16 C 0
s Manis_pentadactyla.KN006162.1                             217611 42 +    317179 ----------------------------------------------------t---cca----ctg-ttct-ttagcgt-tgactgttgct---a-t-g-g----aaaa---a-a-------c-a--c
i Manis_pentadactyla.KN006162.1                          I 16 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146755 45 +    207569 ----------------------------------------------------t---cca----ctg-tatt-ttggcat-tgaatgttgct---g-t-g-a----aaaaagaa-a-------a-a--t
i Megaderma_lyra.MegLyr_scaffold_4542                    I 19 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             15018 42 -     74585 ----------------------------------------------------t---cca----ctg-tatttttggtgt-taaatgctgct---g-t-g-a----aaaa---a-a-------t-a---
i Mellivora_capensis.MelCap_flattened_line_19308         I 19 I 3
s Marmota_marmota.CZRN01000018.1                           7490493  8 +  40650429 aa-----------------------ttttca-------------------------------------------------------------------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 8115
s Mico_argentatus.k141_582562                                 6772 60 +     17804 aa-----------------------aagcttgt----aagta-----ttg-tg---ccg----ctg-tgtc-ttggcat-tacattttgct---agg-aaa----aa-----a-a-------t-a---
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7545 60 -     12984 aa-----------------------aagcttgt----aagta-----ttg-tg---ccg----ctg-tgtc-ttggcat-tacattttgct---agg-aaa----aa-----a-a-------t-a---
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15507 60 -     26561 aa-----------------------aagcttgt----aagta-----ttg-tg---ccg----ctg-tgtc-ttggcat-tacattttgct---agg-aaa----aa-----a-a-------t-a---
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981352 64 +  93316391 AA-----------------------TATCTTGTAAGGAAGTA-----tgt-tt---cca----ctg-tatt-ttggCAT-TCAGTATTGCT---AGG-G-A----AA-----A-C-------T-G--T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181014 42 +    200668 ----------------------------------------------------t---gca----atg-tgtg-ttggcat-tgaatattgct---g-t-g-g----aaaa---a-a-------t-a--t
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 12 C 0
s Miopithecus_ogouensis.k141_1534655                         18808 60 -     27822 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----cta-catc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5104 42 +     27589 ----------------------------------------------------t---cca----ctg-tatttttggtgt-caaatgctcct---g-t-g-a----aaaa---a-a-------t-a---
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 19 I 3
s Mirza_zaza.k141_766280                                     49213 64 -     62432 aa-----------------------tatcttataaggaagta-----tgt-tt---cca----ctg-tatt-ttggcat-tcaatattgct---agg-g-a----aa-----a-c-------t-g--t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175196 42 +    366855 ----------------------------------------------------t---tca----ctg-tatt-ttggtat-tgagtgttgct---g-t-g-g----aaaa---a-a-------t-a--t
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 19 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14757 42 -     63510 ----------------------------------------------------t---tca----ctg-tatt-ttggtgt-taaatgttgct---g-t-g-a----gaaa---a-a-------t-a--c
i Mungos_mungo.MunMun_flattened_line_18455               I 19 C 0
s Murina_feae.MurFea_scaffold_17764                          34104 32 +     47283 ----------------------------------------------------t---cca----ctg-tatt-ttggcat-tgaatgttgct---g-t-g-----------------------------
i Murina_feae.MurFea_scaffold_17764                      I 16 I 9
s Mustela_putorius.JH418006.1                             14344050 42 +  14710649 ----------------------------------------------------t---cca----ctg-tattttcggtgt-taaatgctgct---g-t-g-a----aaaa---a-a-------t-a---
i Mustela_putorius.JH418006.1                            I 19 I 3
s Myotis_brandtii.KE162005.1                               9788555 32 +  10118263 ----------------------------------------------------t---tca----ctg-tatt-ttggcat-tgaatgttgct---g-t-g-----------------------------
i Myotis_brandtii.KE162005.1                             I 19 I 9
s Myotis_davidii.KB100139.1                                4378967 32 +   6019432 ----------------------------------------------------t---cca----ctg-tatt-ttggcat-tgaatgttgct---g-t-g-----------------------------
i Myotis_davidii.KB100139.1                              I 19 I 9
s Myotis_lucifugus.GL429869.1                               378786 32 +   4330536 ----------------------------------------------------t---cca----ctg-tatt-ttggcat-tgaatgttgct---g-t-g-----------------------------
i Myotis_lucifugus.GL429869.1                            I 19 I 8
s Myotis_myotis.MyoMyo_scaffold_185951                        2506 32 +      3929 ----------------------------------------------------t---cca----ctg-tatt-ttggcat-tgaatgttgct---g-t-g-----------------------------
i Myotis_myotis.MyoMyo_scaffold_185951                   I 19 I 9
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116515 60 +    130748 aa-----------------------aatccttg----aagtg-----ttg-tt---ctg----ct-atagt-ttgtcttgaatggtgt---tggt-g-c-a----ga-----a-a-------t-c--t
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              25110 60 +     34575 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465489 42 -  31847680 ----------------------------------------------------t---cca----ctg-tatttttggtgt-caaatgctgct---g-t-g-a----aaaa---a-a-------t-a---
i Neomonachus_schauinslandi.NINY01007730.1               I 19 I 3
s Noctilio_leporinus.NocLep_scaffold_7894                   123630 42 -    149072 ----------------------------------------------------t---tca----ctg-tatt-ttggcat-tgaatgctgct---a-t-g-g----aaaa---a-a-------t-a--t
i Noctilio_leporinus.NocLep_scaffold_7894                I 19 C 0
s Nomascus_annamensis.k141_1771965                           50057 60 -    132029 aa-----------------------tatcttat----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6153 60 -     16345 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12036 60 +     22201 aa-----------------------tatcttat----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410373 60 -  22158432 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22436 60 -     54323 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194894 42 +   9404916 ----------------------------------------------------T---TCA----ctg-tatttttggttt-taaatgcTGCC---G-T-G-A----AA---AAA-A-------T-A---
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 16 C 0
s Nycticebus_bengalensis.LG01                             93631516 60 + 196305487 aa-----------------------tatcttgt----agaga-----tcg-gt---gga----ctg-tatt-ttggcat-taactattgct---agg-g-a----aa-----g-c-------t-a--t
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              905 60 +      2758 aa-----------------------tatcttgt----agaga-----tcg-gt---gga----ctg-tatt-ttggcat-taactattgct---agg-g-a----aa-----g-c-------t-a--t
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559783 60 - 199412804 aa-----------------------tatcttgt----agaga-----tcg-gt---gga----ctg-tatt-ttggcat-taactattgct---agg-g-a----aa-----g-c-------t-a--t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448273 42 +   2017862 ----------------------------------------------------t---cca----ctg-tatttttggtgt-taaatgctgct---g-t-g-a----aaaa---a-a-------t-a---
i Odobenus_rosmarus.KB229312.1                           I 19 I 3
s Otocyon_megalotis.JAEUCK010005147.1                        35941 42 +    559221 ----------------------------------------------------t---tca----ctg-tttttttggttt-taaatgctgct---g-t-g-a----aaaa---a-a-------t-a---
i Otocyon_megalotis.JAEUCK010005147.1                    I 16 I 1
s Otolemur_crassicaudatus.k141_85057                         23007 60 -     23432 AA-----------------------TATCTTGT----AGAGA-----TGG-GT---CAA----CTG-TATT-TTGGTAT-TAACTATTGCT---AGG-G-A----AA-----G-C-------T-A--T
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347572 60 +   1103335 AA-----------------------TATCTTGT----AGAGA-----TGG-GT---CAA----CTG-TATT-TTGGTAT-TAACTATTGCT---AGG-G-A----AA-----G-C-------T-A--T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.KZ622849.1                                 29350 61 -    110857 AA-----------------------TATCTTGT----AGGTA-----ATG-GG---CCA----CTG-TATC-TTGGCAT-TAAATTTtgct---aggaa-a----aa-----a-a-------t-a--t
i Pan_troglodytes.KZ622849.1                             I 386 I 19
s Panthera_onca.PanOnc_flattened_line_3271                   20814 42 -    230217 ----------------------------------------------------t---ccg----ttg-tatt-ttggtgc-taaatgttgct---g-t-g-a----aaa--g-a-a-------t-a--c
i Panthera_onca.PanOnc_flattened_line_3271               I 25 C 0
s Panthera_pardus.KV860321.1                              18458140 42 -  18783137 ----------------------------------------------------t---ccg----ttg-tatt-ttggtgc-taaatgttgct---g-t-g-a----aaa--g-a-a-------t-a--c
i Panthera_pardus.KV860321.1                             I 25 C 0
s Panthera_tigris.KE722367.1                               3968866 42 +   8748460 ----------------------------------------------------t---ccg----ttg-tatt-ttggtgc-taaatgttgct---g-t-g-a----aaa--g-a-a-------t-a--c
i Panthera_tigris.KE722367.1                             I 25 C 0
s Papio_anubis.CM001495.2                                   239662 59 - 183742232 AA-----------------------TATCTTGT----AAGTA-----TTG-GG---CCA----CTG-CATC-TTGGCAT-TAAAttttgct---agg-a-a----aa-----a-a-------a-a---
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6129 59 +     21308 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287166 59 -  20919399 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18782 59 -     27687 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11918 59 +     16796 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18728 59 -     23640 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-catc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------a-a---
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11740 42 +     78924 ----------------------------------------------------t---tca----ctg-tatt-ttagtgc-taaatgttgct---g-t-g-a----aaaa---a-a-------t-a--g
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 19 C 0
s Perodicticus_ibeanus.k141_1921260                          21619 60 +     31479 aa-----------------------tatcttgt----agaga-----ttg-gt---tga----ctg-tatt-ttggtat-taactattgtt---agg-g-a----aa-----g-c-------t-a--t
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            13990 60 -     24908 aa-----------------------tatcttgt----agaga-----ttg-gt---tga----ctg-tatt-ttggtat-taactattgtt---agg-g-a----aa-----g-c-------t-a--t
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5564 60 +      7560 aa-----------------------tatcttat----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-gaaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61271 60 -     63152 aa-----------------------tatcttat----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-gaaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43870 60 +     45295 aa-----------------------tatcttat----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-gaaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1549 60 +      5735 AA-----------------------TATCTTAT----AAGTA-----TTG-GG---CCA----CTG-TATC-TTGGCAT-GAAATTTTGCT---AGG-A-A----AA-----A-A-------T-A--T
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46370 32 +     46691 ----------------------------------------------------t---aca----ctg-taat-ttgtcat-tgaacgttgct---g-t-g-----------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        I 19 I 9
s Pithecia_albicans.k141_1239476                             61742 61 +    207309 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taaattttgca---agg-a-a----aa-----aca-------c-a--t
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2862 61 -     25401 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taaattttgca---agg-a-a----aa-----aca-------c-a--t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28577 61 +     58159 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taaattttgca---agg-a-a----aa-----aca-------c-a--t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28853 61 +     63561 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taaattttgca---agg-a-a----aa-----aca-------c-a--t
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28616 61 +     51148 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taaattttgca---agg-a-a----aa-----aca-------c-a--t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553609 61 -   4542175 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taaattttgct---agg-a-a----aa-----aca-------c-a--t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28600 61 +     51125 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taaattttgca---agg-a-a----aa-----aca-------c-a--t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5018 61 +     39866 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taacttctgca---agg-a-a----aa-----aca-------t-a--t
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           105 61 -      9282 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taacttctgca---agg-a-a----aa-----aca-------t-a--t
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39506 61 -     87950 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taacttctgca---agg-a-a----aa-----aca-------t-a--t
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39899 61 -     88961 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taacttctgca---agg-a-a----aa-----aca-------t-a--t
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4598 61 -     39403 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taacttctgca---agg-a-a----aa-----aca-------t-a--t
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39552 61 +     87928 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taacttctgca---agg-a-a----aa-----aca-------t-a--t
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4596 61 -     60166 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taacttctgca---agg-a-a----aa-----aca-------t-a--t
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11532 61 -     67232 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taacttctgca---agg-a-a----aa-----aca-------t-a--t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39448 61 -     90634 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taacttctgca---agg-a-a----aa-----aca-------t-a--t
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40916 61 +     89403 aa-----------------------acgcttgt----aagta-----ttg-tg---cca----cag-tgtc-ttggcat-taacttctgca---agg-a-a----aa-----aca-------t-a--t
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173884 60 - 189387572 AA-----------------------TATCTTGT----AAGTA-----ATG-GG---CCA----CTG-TATC-TTGGCAT-TAAATTTTGCT---AGG-A-A----AA-----A-A-------T-A--T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188882 60 -   9816681 aa-----------------------tatcttgt----aagta-----atg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24047 60 +     69807 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41242 60 -     80239 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980251 60 +   4620579 AA-----------------------TATCTCGT----AAGTA-----TTG-TT---TCA----CTG-TACT-TTGGCAT-TAAATATTGCT---AGG-G-A----AA-----A-C-------T-A--T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562830 60 -   2598838 AA-----------------------TATCTTGT----AAGTA-----TTG-TT---CCA----CTG-TATT-TTGGCAT-TAAATATTGCT---AGG-G-A----AA-----A-C-------T-A--T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            472 60 -      7103 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tatt-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1072 60 -     11706 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tatt-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4807 60 -     30655 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tatt-ttggcat-taaatattgct---agg-g-a----ga-----a-c-------t-a--t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31132 60 +     46564 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tatt-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91423 60 -     98465 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tatt-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------c-a--t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5041 60 +     35169 aa-----------------------tatcttgt----aagta-----ttg-tt---cca----ctg-tatt-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48258 42 -     66298 ----------------------------------------------------t---tca----ctg-tgtt-ttgtcat-ggaatattgct---g-t-g-g----agaa---a-a-------t-a--t
i Pteronotus_parnellii.KE847780.1                        I 19 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          5156 42 -     10349 ----------------------------------------------------t---cca----ctg-tattttcggtgt-taaatgctgct---g-t-g-a----aaaa---a-a-------t-a---
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 19 I 3
s Pteropus_alecto.KB030862.1                               5837178 42 -  28871421 ----------------------------------------------------t---cta----ctg-tatt-tgggcat-tgaatgttgct---g-c-g-g----aaaa---a-a-------t-a--t
i Pteropus_alecto.KB030862.1                             I 19 C 0
s Pteropus_vampyrus.KN525825.1                             3533753 42 -   4952924 ----------------------------------------------------t---cta----ctg-tatt-tgggcat-tgaatgttgct---g-c-g-g----aaaa---a-g-------t-a--t
i Pteropus_vampyrus.KN525825.1                           I 19 C 0
s Puma_concolor.QAVW01001104.1                            18095692 42 +  38429054 ----------------------------------------------------t---ctg----ttg-tatt-ttggtgc-taaatgttgct---g-t-g-a----aaa--g-a-a-------t-a--c
i Puma_concolor.QAVW01001104.1                           I 25 C 0
s Pygathrix_cinerea.k141_1153803                             23435 60 +     91421 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  149927 60 -   7812017 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgtt---agg-a-a----aa-----a-a-------t-a--t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4304 60 +     72585 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909842 53 +   3329780 ----------------------------------------------------t---cca----ctg-tatt-tttacat-tggatgttgct---a-t-g-gggaaaaaa---a-aaaagaaat-a--t
i Rhinolophus_sinicus.LVEH01000134.1                     I 19 C 0
s Rhinopithecus_bieti.k119_221883                            25268 60 +     27361 aa-----------------------tatattgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118618 60 + 195417433 AA-----------------------TATATTGT----AAGTA-----TTG-GG---CCA----CTG-TATC-TTGGCAT-TAAATTTTGCT---AGG-A-A----AA-----A-A-------T-A--T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232876 60 -   7961872 aa-----------------------tatattgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71223 42 -    116970 ----------------------------------------------------t---cta----ctg-tatt-tgggcaa-tgaatgttgct---g-t-g-g----aaaa---a-a-------t-a--t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 19 I 6
s Saguinus_bicolor.k141_1429097                                722 56 +     27962 aa-----------------------aagcttct----aagta-----ttg-tg---ccg----ctg-t-----tggagt-tacattttgct---agg-a-a----aa-----a-a-------t-a--t
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              735 56 +      6077 aa-----------------------aagcttct----aagta-----ttg-tg---ccg----ctg-t-----tggagt-tacattttgct---agg-a-a----aa-----a-a-------t-a--t
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              750 56 +      5971 aa-----------------------aagcttct----aagca-----ttg-ta---ccg----ctg-c-----tggagt-tacattttgct---agg-a-a----aa-----a-a-------t-a--t
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                804 56 +      5932 aa-----------------------aagcttct----aagca-----ttg-tg---ccg----ctg-t-----tggagt-tacattttgct---agg-a-a----aa-----a-a-------t-a--t
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                               950 56 -      2099 aa-----------------------aagcttct----aagca-----ttg-ta---ccg----ctg-t-----tggagt-tacactttgct---agg-a-a----aa-----a-a-------t-a--t
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       387981 56 - 209938924 aa-----------------------aagcttct----aagta-----ttg-tg---ccg----ctg-t-----tggagt-tacattttgct---agg-a-a----aa-----a-a-------t-a--t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 751 56 +      5979 aa-----------------------aagcttct----cagca-----ttg-ta---ccg----ctg-c-----tggagt-tacactttgct---agg-a-a----aa-----a-a-------t-a--t
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1134 56 -      4301 aa-----------------------aagcttct----aagta-----ttg-tg---ccg----ctg-t-----tggagt-tacattttgct---agg-a-a----aa-----a-a-------t-a--t
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235186 61 +   5703754 aa-----------------------aagtttgt----aagta-----ttg-tg---cca----ctg-tgtc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4776 61 +     21866 aa-----------------------aagtttgt----aagta-----ttg-tg---cca----ctg-tgtc-ttggcat-taaattttgct---agg-a-a----aa-----aaa-------t-a--t
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112933 47 +    313613 ------------------------------------------------gtgttgtccta----ttg-cact-ttgtcat-tgaatgttgcg---g-t-g-g----ga-----a-a-------tta---
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 2
s Semnopithecus_entellus.k141_158471                         21756 60 +     27374 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25273 60 +     58920 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11768 60 -     45317 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-g--t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19425 60 -     42441 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-g--t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22107 60 -     29113 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25179 60 -     48123 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855628 64 -   1910179 AA-----------------------TCCACCAT----AATGGACTCTTAG-TT---CCT----TTG-CATT-TTTGCAT-CTCATGTTGCT---G-G-T-G----AA-----A-A-------T-A--T
i Solenodon_paradoxus.SolPar_flattened_line_126          I 736 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3333 42 -     97271 ----------------------------------------------------c---cca----ctg-tatttttagtgt-taaatgctgct---g-t-g-a----gaaa---a-a-------t-a---
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 19 I 3
s Suricata_suricatta.SurSur_flattened_line_6629             121351 42 +    196729 ----------------------------------------------------t---tca----ctg-tatt-ttggtgt-taaatgttgct---g-t-g-a----gaaa---a-a-------t-a--c
i Suricata_suricatta.SurSur_flattened_line_6629          I 19 C 0
s Spermophilus_dauricus.KZ294078.1                         1857696  8 +   3870691 aa-----------------------ttttca-------------------------------------------------------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 8282
s Symphalangus_syndactylus.tarseq_199                       387354 60 +   1523678 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-tacattttgct---agg-a-a----aa-----a-a-------t-a--t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1388 58 -      2009 aa-----------------------aatctttg----aagtg-----ttg-tc---ctg----ct--tagt-ttgtctt-aatgttgt---tggt-g-c-a----ga-----a-a-------t-c--t
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188007 26 +    199430 ----------------------------------------------------t---ctg----ctg-tgtt--tggcat-tgaatgtgg---------------------------------------
i Tapirus_indicus.TapInd_scaffold_7432                   I 19 I 8
s Tapirus_terrestris.TapTer_scaffold_755                    101943 19 -    539355 aa-t---at--cttgta-agtgttgt------------------------------------------------------------------------------------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 34
s Tarsius_lariang.k141_1780720                                4071 30 +      6850 ca-----------------------tatcaccc----aagta-----cta-tt---cct----ttg-tatg---------------------------------------------------------
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4110 30 +     20590 ca-----------------------tatcaccc----aagta-----cta-tt---cct----ttg-tatg---------------------------------------------------------
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349647 59 - 186847797 aa-----------------------tatCTTGT----AAGTA-----TTG-GG---CCA----CTG-CATC-TTCGCAT-TAAAttttgct---agg-a-a----aa-----a-a-------a-a---
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16733 56 -     31044 aa-----------------------aatcttgg----aggtg-----ttg-tt---cca----ct-acatt-ttgtctt-tgaaaaat------a-g-c-a----aa-----a-a-------t-c--t
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476074 42 -    610378 ----------------------------------------------------c---aca----ctg-tatg-tcggcat-tgaatgttgct---g-t-g-g----aaaa---a-a-------t-a--t
i Tonatia_saurophila.TonSau_scaffold_294                 I 19 C 0
s Trachypithecus_auratus.k141_1189070                        17320 60 +     26378 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30001 60 -     78344 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16641 60 +     25722 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24864 60 -     62838 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           24981 60 +     46913 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttact---agg-a-a----aa-----a-a-------t-a--t
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5791 60 -     28527 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26803 60 -     64340 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24840 60 -     63452 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6282 60 +     22490 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3922 31 +      4141 ----------------------------------------------------------------------c-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Trachypithecus_melamera.k141_324021                    I 20 C 0
s Trachypithecus_obscurus.k141_848057                         6708 60 -     13050 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             251943 60 -   6242583 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57675 60 +     59866 aa-----------------------tatcttgt----aagta-----ttg-gg---cca----ctg-tatc-ttggcat-taaattttgct---agg-a-a----aa-----a-a-------t-a--t
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1829647 60 -   4065304 aa-----------------------tatcttgt----aagtc-----tta-tt---acg----ttg-tatt-tagacac-tgaattttgct---acg-a-g----aa-----a-a-------t-a--t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4190 60 -     70247 aa-----------------------tatcttgt----cagtc-----tta-tt---aca----cta-tatc-tggacag-tgaattttgct---aag-a-g----aa-----a-a-------t-a--t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104155 47 -    105689 ------------------------------------------------atgttgcctcg----ctg-tact-tcagcat-tgaatgttgct---g-t-g-g----ga-----g-a-------t-a--t
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178219 42 +   5085361 ----------------------------------------------------t---cca----ctg-tatttttggtgt-aaaatgctgct---g-t-g-a----aaaa---a-a-------t-g---
i Ursus_maritimus.KK499267.1                             I 19 C 0
s Varecia_rubra.k141_787544                                  21891 60 -     30710 aa-----------------------tatcttgt----aggta-----ttg-tt---ctg----ctg-tatt-ttggcat-taaatgttgct---agg-g-a----aa-----a-c-------t-a--t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20798 60 -    147434 aa-----------------------tatcttgt----aggta-----ttg-tt---ccg----ctg-tatt-ttggcat-taaatattgct---agg-g-a----aa-----a-c-------t-a--t
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101659 42 -    112863 ----------------------------------------------------t---tca----ctg-tatttttcgttt-taaatgctgct---g-t-g-a----aaaa---a-a-------t-a---
i Vulpes_lagopus.VulLag_flattened_line_12041             I 16 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25493 42 -     86975 ----------------------------------------------------t---cca----ctg-tatttttggtgt-taaatgctgct---g-t-g-a----aaaa---a-a-------t-a---
i Zalophus_californianus.ZalCal_flattened_line_17732     I 19 I 3
s Xerus_inauris.XerIna_scaffold_2302                        163883  8 -    224448 AA-----------------------TTTTCA-------------------------------------------------------------------------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     I 743 I 7853
e Allochrocebus_solatus.k141_3554717                         14582  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         12904  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39077361 28 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1084 18 +     36723 G--A--GAC---TAGCCTGTT-ACA--------T
s Acinonyx_jubatus.LLWD01001279.1                           809480 17 +   1699592 a--a--tac---cagacaatt-ac---------a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411571 15 +  29979442 ------tac---cagatagtt-ac---------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44379 18 +     53615 g--a--gtc---tagccagtt-aca--------t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40194 18 +     44087 g--a--gtc---tagccagtt-aca--------t
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         12904 12 -     21945 -------------AGCCAGTT-ACA--------T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14582 12 +     32033 -------------AGCCAGTT-ACA--------T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69122 18 -     84148 g--a--ggc---tggctagtt-aca--------t
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41345 18 -     78289 g--a--ggc---tggctagtt-aca--------t
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40793 18 +     55831 g--a--ggc---tggctagtt-aca--------t
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39234 18 -     64179 g--a--ggc---tggctagtt-aca--------t
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20877 18 -     24835 g--a--ggc---tggctagtt-aca--------t
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37860 18 +     45454 g--a--ggc---tggctagtt-aca--------t
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43559 18 +     70886 g--a--ggc---tggctagtt-aca--------t
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5686 18 +     30854 g--a--ggc---tggctagtt-aca--------t
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29825 18 +     42133 g--a--ggc---tggctagtt-aca--------t
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173086 17 -    412891 g--a--gac---cagtgagtt-ac---------a
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 5
s Aotus_azarae.k141_118258                                   47634 18 -     65372 g--a--ggc---tggctagtt-aca--------t
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41380 17 +     43593 g--a---gc---tggctagtt-aca--------t
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669392 18 +   5030052 g--a--ggC---TGGCTAGTT-ACA--------T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21034 18 -     23494 g--a--ggc---tggctagtt-aca--------t
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6170 18 +      8415 g--a--ggc---tggctagtt-aca--------t
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16237 18 -     45910 g--a--agt---tggccagtt-ata--------t
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   914 17 -     15198 g--a--ggt---cagcaaatt-ac---------a
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 5
s Ateles_geoffroyi_b.tarseq_1536                               271620 18 +  21539123 g--a--ggc---tggctagtt-aca--------t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7791 18 +     48076 g--a--ggc---tggctagtt-aca--------t
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2925 18 -     28759 g--a--ggc---tggctagtt-aca--------t
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30477 18 +     44353 g--a--ggc---tggctagtt-aca--------t
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45852 18 -     71267 g--a--ggc---tggctagtt-aca--------t
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19908 18 -     33135 g--a--ggc---tggctagtt-aca--------t
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3021 26 +     11645 g--a--agc---tgaccaatt-acataattacat
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3023 26 -     19611 g--a--agc---tgaccagtt-acataattacat
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4812 18 +     28062 g--a--ggc---tggctagtt-aca--------t
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40106 18 -     91139 g--a--ggc---tggctagtt-aca--------t
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17632 18 +     95584 g--a--ggc---tggctagtt-aca--------t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17545 18 +    119600 g--a--ggc---tggctagtt-aca--------t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7048 16 +     18648 ------ggc---tggcttgtt-aca--------t
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6723 16 -     13885 ------ggc---tggcccgtt-aca--------t
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15410 16 +     17162 ------ggc---tggcttgtt-aca--------t
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450366 16 + 189096842 ------GGC---TGGCTTGTT-ACA--------T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16659 16 -     18408 ------ggc---tggcttgtt-aca--------t
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502050 15 +  60362399 ------tgc---cagatagtt-gc---------a
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5680 15 -     23171 ------tgc---cagatagtt-gc---------a
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219041 15 +   9314153 ------TGC---CAGATAGTT-GC---------A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41612166 15 +  59632846 ------tgc---cagatagtt-gc---------a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45103736 15 -  63665305 ------TGC---CAGATAGTT-GC---------A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267410 15 +    496798 -------GC---TGGCCAGTT-ACA--------T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                974 17 +      5315 g--a--agc---cagcaagtt-ac---------a
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 5
s Cebuella_niveiventris.k141_592277                           1944 16 -     12580 ------ggc---tggcttgtt-aca--------t
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39830 16 +     53515 ------ggc---tggcttgtt-aca--------t
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368024 18 -  26074798 g--g--ggc---tggctagtt-aca--------t
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4913 18 -     34880 g--g--ggc---tggctagtt-aca--------t
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64008 18 -     89041 g--g--ggc---tggctagtt-aca--------t
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            577 15 -      1636 -------gc---tggccagtt-act--------t
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489022 19 -  27778364 ggaa--gag---tagccaatt-ac---------a
i Ceratotherium_simum.JH767749.1                         I 8 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15855 19 +     27315 ggaa--gag---tagccaatt-ac---------a
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 8 C 0
s Cercocebus_atys.KQ010504.1                                137539 18 -   4669795 a--a--gac---tagccaATT-ACA--------C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41279 18 +     47900 a--a--gac---tagccaatt-aca--------c
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41111 18 -     44860 a--a--gac---tagccaatt-aca--------c
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41093 18 -    148725 a--a--gac---tagccaatt-aca--------c
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24153 18 -     40656 g--a--gtc---tagtcagtt-ata--------t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4088 18 +     20796 g--a--gtc---tagccagtt-aca--------t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8343 18 -     17524 g--a--gtc---tagccagtt-aca--------t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24032 18 -     34525 g--a--gtc---tagccagtt-aca--------t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8743 18 -     25376 g--a--gtc---tagccagtt-aca--------t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361308 18 -  39242232 g--a--gtc---tagccagtt-aca--------t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267053 18 +  21565898 g--a--gtc---tagccagtt-aca--------t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28506 18 -     45857 g--a--gtc---tagccagtt-aca--------t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24297 18 -     32606 g--a--gtc---tagccagtt-aca--------t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          484 18 +      8499 g--a--gtc---tagccagtt-aca--------t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           21996 18 +     70610 g--a--gtc---tagccagtt-aca--------t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18861 18 +     36323 g--a--gtc---tagccagtt-aca--------t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9807 18 -     19938 g--g--ggg---tagccagttac-a--------t
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             27443 26 -     33796 g--a--ggc---tggccaatt-acataattacag
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1638 26 -     15404 g--a--ggc---tggccaatt-acctaattacat
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5905 18 -     32913 g--a--ggc---tggctagtt-aca--------t
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16318 18 -     40346 g--a--ggc---tggctagtt-aca--------t
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16582 18 +    216457 g--a--ggc---tggctagtt-aca--------t
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16361 18 +     39636 g--a--ggc---tggctagtt-aca--------t
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            780 18 +      5346 g--a--ggc---tggctagtt-aca--------t
i Chiropotes_albinasus.k141_1946120                      I 9 C 0
s Chiropotes_israelita.k141_313004                           39452 18 -    112038 g--a--ggc---tggcgagtt-aca--------t
i Chiropotes_israelita.k141_313004                       I 9 C 0
s Chiropotes_sagulatus.k141_1113111                           5024 18 +     34062 g--a--ggc---tggcgagtt-aca--------t
i Chiropotes_sagulatus.k141_1113111                      I 9 C 0
s Chlorocebus_aethiops.ctg25                                339757 18 +  18827391 g--a--gtc---tagccagtt-aca--------t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6368 18 -     44032 g--a--gtc---tagccagtt-aca--------t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301083 18 - 135778131 G--A--GTC---TAGCCAgtt-aca--------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405632 18 -   2368649 G--A--GAC---TAGCCAGTT-ACA--------T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374791 18 - 200372422 g--a--gac---tagccagtt-aca--------t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5516 18 -      6605 g--a--gac---tagccagtt-aca--------t
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803929 19 +  53390261 T--AGAAGC---TAGCCAGTA-AA---------A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9323 17 +     10921 g--a--ggc---cagctagtt-ac---------t
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 9 I 20
s Cryptoprocta_ferox.CryFer_flattened_line_16129               714 17 +     87169 a--a--tgc---cagataatt-aa---------a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2106015 18 -   2246927 G--G--GGG---TAgcaagttac-a--------t
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289471 18 +  12879189 g--a--ggc---tggccaatt-aca--------t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661308 19 -   1390856 ggaa--gag---tagccaatt-ac---------a
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 8 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136098 19 -    198055 ggaa--gag---tagccaatt-ac---------a
i Diceros_bicornis.DicBicMic_scaffold_5955               I 8 C 0
s Eidolon_helvum.AWHC01266696.1                               2662 17 +     19438 g--a--ggc---tggctaatt-ac---------a
i Eidolon_helvum.AWHC01266696.1                          C 0 I 40
s Enhydra_lutris.KZ291758.1                               24907020 15 +  41312741 ------tgc---cagATAGtt-ac---------a
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                             12574242 17 +  14770903 g--a--ggc---cagccaatt-ac---------a
i Eptesicus_fuscus.JH977646.1                            I 9 C 0
s Equus_asinus.JREZ01000139.1                              3038280  3 -   4378816 g--a--g---------------------------
i Equus_asinus.JREZ01000139.1                            I 35 I 3
s Equus_caballus.CM000403.2                               21372214  3 +  39960074 g--a--g---------------------------
i Equus_caballus.CM000403.2                              I 35 I 3
s Equus_przewalskii.KK951119.1                              409000  3 -    498745 g--a--g---------------------------
i Equus_przewalskii.KK951119.1                           I 35 I 3
s Erythrocebus_patas.Contig38                               259315 18 +  21539334 g--a--gtc---tagccagtt-aca--------t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12435 18 -     24895 a--a--ggc---tgaccaatt-aca--------t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40147 18 -     70999 a--a--ggc---tgaccaatt-aca--------t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84107 18 +    112731 a--a--ggc---tgaccaatt-aca--------t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40679 18 +     68309 a--a--ggc---tgaccaatt-aca--------t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51004 18 -     65740 a--a--ggc---tgaccaatt-aca--------t
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21634 18 -     75513 a--a--ggc---tgaccaatt-aca--------t
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45827 18 -     97555 a--a--ggc---tgaccaatt-aca--------t
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2554 18 +     30972 a--a--ggc---tgaccaatt-aca--------t
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40277 18 -     52037 a--a--ggc---tgaccaatt-aca--------t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56678 18 -    111500 a--a--ggc---tgaccaatt-aca--------t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186243138 17 - 206538554 a--a--tac---cagacaatt-ag---------a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112920 17 - 205367284 a--a--tac---cagacaatt-ag---------a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24268 17 -     30238 a--a--tac---cagacaatt-ag---------a
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     119792 18 -    137831 A--A--AGT---TGGCCAGTT-ACA--------T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3332 18 +     22493 A--A--AGT---TGGCCAGTT-ACA--------T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16801 18 +     32986 A--A--AGT---TGGCCAGTT-ACA--------T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15636 18 +     18121 g--a--ggg---tgatcagtc-aca--------t
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1438 18 -      8343 g--a--gac---tagcctgtt-aca--------t
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250938 18 - 186649187 g--a--gac---tagcctgtt-aca--------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12364 18 -     40692 g--a--ggc---tgaccaatt-aca--------t
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33766 18 +     49394 g--a--ggc---tgaccaatt-aca--------t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58634 18 -     66874 g--a--ggc---tgaccaatt-aca--------t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7511 18 -     42923 g--a--ggc---tgaccaatt-aca--------t
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14507 18 -     53142 g--a--ggc---tgaccaatt-aca--------t
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27030 17 -    327341 a--a--tgc---cagacagtt-ac---------a
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546567 17 -   1711038 g--a--ggt---tggccagtt-ac---------a
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 21
s Hipposideros_galeritus.HipGal_scaffold_23202               45884 17 +     49977 a--a--ggt---tggccagct-ac---------a
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 20
s Hoolock_leuconedys.ctg274                                    138832 18 -    630532 g--a--gac---tagccagtt-aca--------t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65705 17 +     83186 a--a--tgc---cagacagtt-tt---------a
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               1865 18 +     12352 g--a--gac---tagtcagtt-aca--------t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9048 18 +     55766 g--a--gac---tagtcagtt-aca--------t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048387 18 + 191637585 g--a--gac---tagccagtt-aca--------t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797719 18 +  11177569 g--a--gac---tagccagtt-aca--------t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     509 26 -      1527 g--a--ggc---tgaccaatt-acataattacat
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40167 18 +    110728 g--a--ggc---tggctagtt-aca--------t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757155 18 +  30322482 g--a--ggc---tgaccaatt-aca--------t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         861 18 -     13097 g--a--ggc---tggctagtt-aca--------t
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            812 18 +      5940 g--a--ggc---tggctagtt-aca--------t
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         443 18 -      5717 g--a--ggc---tggctagtt-aca--------t
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7071 17 -     11567 g--a--ggc---tgg-tagtt-aca--------t
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8452 17 -     12945 g--a--ggc---tgg-tagtt-aca--------t
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5804 26 +     29618 g--a--ggc---tgaccaatt-atgtacttacat
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5801 26 +     31569 g--a--ggc---tgaccaatt-acatacttacat
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5814 26 +     24756 g--a--ggc---tgaccaatt-acgtacttacat
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5806 26 +     16388 g--a--ggc---tgaccaatt-acgtacttacat
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810139 15 -   3914936 ------tac---aagatagtt-ac---------a
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lophocebus_aterrimus.ctg367                               329494 18 -   1826925 a--a--gac---tagccaatt-aca--------t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2802 18 +     19643 g--a--agt---tggccagtt-aca--------t
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036460 18 -   6120653 g--a--agt---tggccagtt-aca--------t
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611321 15 +  59628241 ------tgc---cagatagtt-gc---------a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              41774 18 -     61512 a--a--gac---tagccaatt-aca--------t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369402 18 -  60120075 a--a--gac---tagccaatt-aca--------t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21722 18 +     30207 a--a--gac---tagccaatt-aca--------t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18825 18 -     24934 a--a--gac---tagccaatt-aca--------t
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21609 18 +     30527 a--a--gac---tagccaatt-aca--------t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32798 18 -     50087 a--a--gac---tagccaatt-aca--------t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42536 18 +     51645 a--a--gac---tagccagtt-aca--------t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411110 18 - 187317192 a--a--gac---tagccaatt-aca--------t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              395993 18 +  25927173 a--a--gac---tagccaatt-aca--------t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45124 18 -     62418 a--a--gac---tagccaatt-aca--------t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21812 18 +     24253 a--a--gac---tagccaatt-aca--------t
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41569 18 +     59329 a--a--gac---tagccaatt-aca--------t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267401 18 +    668171 a--a--gac---tagccaatt-aca--------t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18747 18 +     21031 a--a--gac---tagccaatt-aca--------t
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32480 18 +     33478 a--a--gac---tagccaatt-aca--------t
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219709 17 -    270270 g--a--ggc---tggcTAATT-AC---------A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 71
s Mandrillus_leucophaeus.scaffold280                        318877 18 +  24302211 a--a--gac---tagccaatt-aca--------t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353709 18 -    752769 a--a--gac---tagccaatt-aca--------t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670359 17 -    737560 a--a--gcc---tagccattt-ac---------g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217653 17 +    317179 a--a--ggc---cagccattt-ac---------g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146800 17 +    207569 g--a--agc---cagcagatt-tt---------a
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 28
s Mellivora_capensis.MelCap_flattened_line_19308             15063 15 -     74585 ------tgc---cagATAGTT-AC---------A
i Mellivora_capensis.MelCap_flattened_line_19308         I 3 C 0
s Mico_argentatus.k141_582562                                 6832 16 +     17804 ------ggc---tggcttgtt-aca--------t
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7605 16 -     12984 ------ggc---tggcttgtt-aca--------t
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15567 16 -     26561 ------ggc---tggcttgtt-aca--------t
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981416 26 +  93316391 G--A--GGC---TGGCCAATT-ACATAGttacat
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181056 17 +    200668 g--a--ggc---cagccagtt-ac---------a
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 5
s Miopithecus_ogouensis.k141_1534655                         18868 18 -     27822 g--a--gtc---tagccagtt-aca--------t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5149 15 +     27589 ------tac---aagatagtt-ac---------a
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 3 C 0
s Mirza_zaza.k141_766280                                     49277 26 -     62432 g--a--ggc---tggccagtt-acataattacat
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175238 20 +    366855 g--a--ggccgccagccagtt-ac---------a
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 5
s Mungos_mungo.MunMun_flattened_line_18455                   14799 17 -     63510 a--a--tgc---cagacagtt-ac---------a
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          34145 17 +     47283 g--a--ggc---cagcTAATT-AC---------A
i Murina_feae.MurFea_scaffold_17764                      I 9 C 0
s Mustela_putorius.JH418006.1                             14344095 15 +  14710649 ------tgc---cggagtgtt-ac---------a
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myotis_brandtii.KE162005.1                               9788596 17 +  10118263 g--a--ggc---cagccaatt-ac---------a
i Myotis_brandtii.KE162005.1                             I 9 C 0
s Myotis_davidii.KB100139.1                                4379008 17 +   6019432 g--a--ggc---cagccaatt-ac---------a
i Myotis_davidii.KB100139.1                              I 9 C 0
s Myotis_lucifugus.GL429869.1                               378826 17 +   4330536 g--a--ggc---cagccaatt-ac---------a
i Myotis_lucifugus.GL429869.1                            I 8 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        2547 17 +      3929 g--a--ggc---cagccAATT-AC---------A
i Myotis_myotis.MyoMyo_scaffold_185951                   I 9 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116575 17 +    130748 g--a--agg---aagtcaatt-c-a--------t
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              25170 18 +     34575 g--a--gac---taaccagtt-aca--------t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465534 15 -  31847680 ------tac---aagatagtt-ac---------a
i Neomonachus_schauinslandi.NINY01007730.1               I 3 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   123672 17 -    149072 g--a--ggc---tatccagtt-at---------a
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 5
s Nomascus_annamensis.k141_1771965                           50117 18 -    132029 g--a--gac---tagccagtt-aca--------t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6213 18 -     16345 g--a--gac---tagccagtt-aca--------t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12096 18 +     22201 g--a--gac---tagccagtt-aca--------t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410433 18 -  22158432 g--a--gac---tagccagtt-aca--------t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22496 18 -     54323 g--a--gac---tagccagtt-aca--------t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194936 15 +   9404916 ------TGC---CAGATAGtt-gc---------a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93631576 18 + 196305487 g--a--agt---tggccagtt-aca--------t
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              965 18 +      2758 g--a--agt---tggccagtt-aca--------t
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559843 18 - 199412804 g--a--agt---tggccagtt-aca--------g
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448318 15 +   2017862 ------tgc---cagataatt-ac---------a
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        35984 15 +    559221 ------tgc---cagatagtt-gc---------a
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_85057                         23067 18 -     23432 A--A--AGT---TGGCCAGTT-ACA--------T
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347632 18 +   1103335 A--A--AGT---TGGCCAGTT-ACA--------T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468327 18 - 189151597 G--A--GAC---TAGCCTGtt-aca--------t
i Pan_troglodytes.CM009242.2                             I 60 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20856 17 -    230217 a--a--tac---cagataatt-ag---------a
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18458182 17 -  18783137 a--a--tac---cagataatt-ag---------a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968908 17 +   8748460 a--a--tac---cagacaatt-ag---------a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   239721 18 - 183742232 a--a--gac---tagccaatt-aca--------t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6188 18 +     21308 a--a--gac---tagccaatt-aca--------t
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287225 18 -  20919399 a--a--gac---tagccaatt-aca--------t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18841 18 -     27687 a--a--gac---tagccaatt-aca--------t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11977 18 +     16796 a--a--gac---tagccaatt-aca--------t
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18787 18 -     23640 a--a--gac---tagccaatt-aca--------t
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11782 11 +     78924 a--g--tgc---cagtca----------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21679 18 +     31479 g--a--agc---tggccagtt-ata--------t
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14050 18 -     24908 g--a--agc---tggccagtt-ata--------t
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5624 18 +      7560 g--a--gac---tagccagtt-aca--------t
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61331 18 -     63152 g--a--gac---tagccagtt-aca--------t
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43930 18 +     45295 g--a--gac---tagccagtt-aca--------t
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1609 18 +      5735 G--A--GAC---TAGCCAGTT-ACA--------T
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46411 17 +     46691 g--a--ggc---cagtcAATT-AC---------A
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        I 9 C 0
s Pithecia_albicans.k141_1239476                             61803 18 +    207309 g--a--ggc---tggctagtt-aca--------t
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2923 18 -     25401 g--a--ggc---tggctagtt-aca--------t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28638 18 +     58159 g--a--ggc---tggctagtt-aca--------t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28914 18 +     63561 g--a--ggc---tggctagtt-aca--------t
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28677 18 +     51148 g--a--ggc---tggctagtt-aca--------t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553670 18 -   4542175 g--a--ggc---tggctagtt-aca--------t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28661 18 +     51125 g--a--ggc---tggctagtt-aca--------t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5079 18 +     39866 g--a--ggc---tggctagtt-aca--------t
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           166 18 -      9282 g--a--ggc---tggctagtt-aca--------t
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39567 18 -     87950 g--a--ggc---tggctagtt-aca--------t
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39960 18 -     88961 g--a--ggc---tggctagtt-aca--------t
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4659 18 -     39403 g--a--ggc---tggctagtt-aca--------t
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39613 18 +     87928 g--a--ggc---tggctagtt-aca--------t
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4657 18 -     60166 g--a--ggc---tggctagtt-aca--------t
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11593 18 -     67232 g--a--ggc---tggctagtt-aca--------t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39509 18 -     90634 g--a--ggc---tggctagtt-aca--------t
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40977 18 +     89403 g--a--ggc---tggctagtt-aca--------t
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173944 18 - 189387572 G--A--GAC---TGGCCTGTT-ACA--------T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188942 18 -   9816681 g--a--gac---tggcctgtt-aca--------t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24107 18 +     69807 g--a--gac---tagccagtt-aca--------t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41302 18 -     80239 g--a--gac---tagccagtt-aca--------t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980311 18 +   4620579 G--A--GGC---TGACCAatt-aca--------t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562890 26 -   2598838 G--A--GGC---TGACCAATT-ACATAAttacat
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            532 26 -      7103 g--a--ggc---tgaccaatt-acataattacat
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1132 26 -     11706 g--a--ggc---tgaccaatt-acataattacat
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4867 26 -     30655 g--a--ggc---tgaccaatt-acataattacat
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31192 26 +     46564 g--a--ggc---tgaccaatt-acataattacat
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91483 26 -     98465 g--a--ggc---tgaccaatt-acataattacat
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5101 26 +     35169 g--a--ggc---tgaccaatt-acataattacat
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48300 17 -     66298 g--g--ggc---cagccaggt-ac---------a
i Pteronotus_parnellii.KE847780.1                        C 0 I 5
s Pteronura_brasiliensis.PteBra_flattened_line_59017          5201 15 -     10349 ------tgc---cagatagtt-ac---------a
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 3 C 0
s Pteropus_alecto.KB030862.1                               5837220 17 -  28871421 g--a--agt---tggctaatt-ac---------a
i Pteropus_alecto.KB030862.1                             C 0 I 64
s Pteropus_vampyrus.KN525825.1                             3533795 17 -   4952924 g--a--agt---tggctaatt-at---------a
i Pteropus_vampyrus.KN525825.1                           C 0 I 50
s Puma_concolor.QAVW01001104.1                            18095734 17 +  38429054 a--a--tac---cagacaatt-ac---------a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23495 18 +     91421 g--a--gac---tagccagtt-aca--------t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  149987 18 -   7812017 g--a--gac---tagccagtt-aca--------t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4364 18 +     72585 g--a--gac---tagccagtt-aca--------t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909895 17 +   3329780 g--a--ggc---cagccagtt-ac---------a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 27
s Rhinopithecus_bieti.k119_221883                            25328 18 +     27361 g--a--gac---tagccagtt-aca--------t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118678 18 + 195417433 G--A--GAC---TAGCCAGTT-ACA--------T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232936 18 -   7961872 g--a--gac---tagccagtt-aca--------t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71271 17 -    116970 g--a--ggc---tgactaatt-ac---------a
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 6 I 36
s Saguinus_bicolor.k141_1429097                                778 18 +     27962 g--a--ggc---tggctagtt-aca--------t
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              791 18 +      6077 g--a--ggc---tggctagtt-aca--------t
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              806 18 +      5971 g--a--ggc---tggctagtt-aca--------t
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                860 18 +      5932 g--a--ggc---tggctagtt-aca--------t
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1006 18 -      2099 g--a--ggc---tggctagtt-aca--------t
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388037 18 - 209938924 g--a--ggc---tggctagtt-aca--------t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 807 18 +      5979 g--a--ggc---tggctagtt-aca--------t
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1190 18 -      4301 g--a--ggc---tggctagtt-aca--------t
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235247 18 +   5703754 g--a--ggc---tggctagtt-aca--------t
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4837 18 +     21866 g--a--ggc---tggctagtt-aca--------t
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112982 15 +    313613 ------ggc---cagccagtt-aa---------a
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_158471                         21816 18 +     27374 g--a--gac---tagccagtt-aca--------t
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25333 18 +     58920 g--a--gac---tagccagtt-aca--------t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11828 18 -     45317 g--a--gac---tagccagtt-aca--------t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19485 18 -     42441 g--a--gac---tagccagtt-aca--------t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22167 18 -     29113 g--a--gac---tagccagtt-aca--------t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25239 18 -     48123 g--a--gac---tagccagtt-aca--------t
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855692 18 -   1910179 G--A--CAC---CAGTCAGTG-AAA--------A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3378 15 -     97271 ------tgc---cagatagtt-ac---------a
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121393 17 +    196729 a--a--tgc---cagacagtt-ac---------a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387414 18 +   1523678 g--a--gac---tagccagtt-aca--------t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1446 17 -      2009 g--a--gga---aagtcaatt-c-a--------t
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188041 17 +    199430 g--a--gat---cagccagtt-ac---------a
i Tapirus_indicus.TapInd_scaffold_7432                   I 8 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    101996 17 -    539355 g--a--gat---cagccagtt-ac---------a
i Tapirus_terrestris.TapTer_scaffold_755                 I 34 C 0
s Tarsius_lariang.k141_1780720                                4101 15 +      6850 -------gc---tggccagtt-aca--------t
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4140 15 +     20590 -------gc---tggccagtt-aca--------t
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349706 18 - 186847797 a--a--gac---tagccaatt-aca--------t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16789 18 -     31044 g--g--ggg---tagccagttac-a--------t
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476116 17 -    610378 g--a--ggc---ctgcaaggt-ac---------a
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 5
s Trachypithecus_auratus.k141_1189070                        17380 18 +     26378 g--a--gac---tagccagtt-aca--------t
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30061 18 -     78344 g--g--gac---tagccagtt-aca--------t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16701 18 +     25722 g--a--gac---tagccagtt-aca--------t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24924 18 -     62838 g--a--gac---tagccagtt-aca--------t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25041 18 +     46913 g--a--gac---tagccagtt-aca--------t
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5851 18 -     28527 g--a--gac---tagccagtt-aca--------t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26863 18 -     64340 g--a--gac---tagccagtt-aca--------t
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24900 18 -     63452 g--a--gac---tagccagtt-aca--------t
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6342 18 +     22490 g--a--gac---tagccagtt-aca--------t
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3953 18 +      4141 g--g--gac---tagccagtt-aca--------t
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6768 18 -     13050 g--a--gac---tagccagtt-aca--------t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252003 18 -   6242583 g--g--gac---tagccagtt-aca--------t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57735 18 +     59866 g--a--gac---tagccagtt-aca--------t
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1829707 18 -   4065304 a--a--ggc---tagccagtt-gta--------t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4250 18 -     70247 a--a--ggc---tagccAGTT-GCA--------T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104202 19 -    105689 g--agaaac---cagccagtt-aa---------a
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178261 15 +   5085361 ------tac---cagatagtt-ac---------a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  21951 18 -     30710 g--a--ggc---tgatcaatt-aca--------t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20858 18 -    147434 g--a--ggc---tgaccaact-aca--------t
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101701 15 -    112863 ------tgc---cagatagtt-gc---------a
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25538 15 -     86975 ------tgc---cagatagtt-ac---------a
i Zalophus_californianus.ZalCal_flattened_line_17732     I 3 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Loxodonta_africana.GL010049.1                           39077361 28 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1102 2 +     36723 TC
s Acinonyx_jubatus.LLWD01001279.1                           809497 2 +   1699592 tt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 8
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411586 2 +  29979442 tt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 46
s Allenopithecus_nigroviridis.k141_3755588                   44397 2 +     53615 tc
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40212 2 +     44087 tc
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         12916 2 -     21945 TC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14594 2 +     32033 TC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69140 2 -     84148 tc
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41363 2 -     78289 tc
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40811 2 +     55831 tc
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39252 2 -     64179 tc
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20895 2 -     24835 tc
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37878 2 +     45454 tc
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43577 2 +     70886 tc
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5704 2 +     30854 tc
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29843 2 +     42133 tc
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173108 2 -    412891 tt
i Anoura_caudifer.AnoCau_scaffold_1412                   I 5 C 0
s Aotus_azarae.k141_118258                                   47652 2 -     65372 tc
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41397 2 +     43593 tc
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669410 2 +   5030052 TC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21052 2 -     23494 tc
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6188 2 +      8415 tc
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16255 2 -     45910 tc
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   936 2 -     15198 tt
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 5 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271638 2 +  21539123 tc
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7809 2 +     48076 tc
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2943 2 -     28759 tc
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30495 2 +     44353 tc
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45870 2 -     71267 tc
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19926 2 -     33135 tc
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3047 2 +     11645 tc
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3049 2 -     19611 tc
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4830 2 +     28062 tc
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40124 2 -     91139 tc
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17650 2 +     95584 tc
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17563 2 +    119600 tt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7064 2 +     18648 tc
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6739 2 -     13885 tc
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15426 2 +     17162 tc
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450382 2 + 189096842 TC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16675 2 -     18408 tc
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502065 2 +  60362399 tt
i CanFam4.chr16                                          C 0 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5695 2 -     23171 tt
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 4
s Canis_lupus_dingo.QKWQ01000480.1                          219056 2 +   9314153 TT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 4
s Canis_lupus_familiaris.chr16                            41612181 2 +  59632846 tt
i Canis_lupus_familiaris.chr16                           C 0 I 4
s Canis_lupus_orion.HG994398.1                            45103751 2 -  63665305 TT
i Canis_lupus_orion.HG994398.1                           C 0 I 4
s Carlito_syrichta.NW_007259797.1                           267425 2 +    496798 TC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                996 2 +      5315 tt
i Carollia_perspicillata.CarPer_scaffold_170178          I 5 C 0
s Cebuella_niveiventris.k141_592277                           1960 2 -     12580 tc
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39846 2 +     53515 tc
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368042 2 -  26074798 tc
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4931 2 -     34880 tc
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64026 2 -     89041 tc
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            592 2 -      1636 tc
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489041 2 -  27778364 tt
i Ceratotherium_simum.JH767749.1                         C 0 I 5
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15874 2 +     27315 tt
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 5
s Cercopithecus_ascanius.k141_3120866                        24171 2 -     40656 tc
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4106 2 +     20796 tc
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8361 2 -     17524 tc
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24050 2 -     34525 tc
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8761 2 -     25376 tc
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361326 2 -  39242232 tc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267071 2 +  21565898 tc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28524 2 -     45857 tc
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24315 2 -     32606 tc
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          502 2 +      8499 tc
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22014 2 +     70610 tc
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18879 2 +     36323 tc
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9825 2 -     19938 tc
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             27469 2 -     33796 tc
i Cheirogaleus_major.k141_666340                         C 0 I 8
s Cheirogaleus_medius.k141_759766                             1664 2 -     15404 tc
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5923 2 -     32913 tc
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16336 2 -     40346 tc
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16600 2 +    216457 tc
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16379 2 +     39636 tc
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            798 2 +      5346 tc
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39470 2 -    112038 tc
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5042 2 +     34062 tc
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339775 2 +  18827391 tc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6386 2 -     44032 tc
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301101 2 - 135778131 tc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405650 2 -   2368649 TC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374809 2 - 200372422 tc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5534 2 -      6605 tc
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803948 2 +  53390261 CT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9360 2 +     10921 tt
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 20 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               731 2 +     87169 tt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 6
s Dasypus_novemcinctus.JH564415.1                          2106033 2 -   2246927 tt
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289489 2 +  12879189 tc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661327 2 -   1390856 tt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 5
s Diceros_bicornis.DicBicMic_scaffold_5955                  136117 2 -    198055 tt
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 5
s Eidolon_helvum.AWHC01266696.1                               2719 2 +     19438 tt
i Eidolon_helvum.AWHC01266696.1                          I 40 C 0
s Enhydra_lutris.KZ291758.1                               24907035 2 +  41312741 tt
i Enhydra_lutris.KZ291758.1                              C 0 I 5
s Eptesicus_fuscus.JH977646.1                             12574259 2 +  14770903 tt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3038286 2 -   4378816 tt
i Equus_asinus.JREZ01000139.1                            I 3 I 5
s Equus_caballus.CM000403.2                               21372220 2 +  39960074 tt
i Equus_caballus.CM000403.2                              I 3 I 5
s Equus_przewalskii.KK951119.1                              409006 2 -    498745 tt
i Equus_przewalskii.KK951119.1                           I 3 I 5
s Erythrocebus_patas.Contig38                               259333 2 +  21539334 tc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12453 2 -     24895 tc
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40165 2 -     70999 tc
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84125 2 +    112731 tc
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40697 2 +     68309 tc
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51022 2 -     65740 tc
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21652 2 -     75513 tc
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45845 2 -     97555 tc
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2572 2 +     30972 tt
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40295 2 -     52037 tc
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56696 2 -    111500 tc
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186243155 2 - 206538554 tt
i Felis_catus.CM001381.2                                 C 0 I 7
s Felis_catus_fca126.CM031415.1                          185112937 2 - 205367284 tt
i Felis_catus_fca126.CM031415.1                          C 0 I 7
s Felis_nigripes.FelNig_flattened_line_31944                 24285 2 -     30238 tt
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 7
s Galago_moholi.ctg3793                                     119810 2 -    137831 TC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3350 2 +     22493 TC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16819 2 +     32986 TC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15654 2 +     18121 tc
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1456 2 -      8343 tc
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250956 2 - 186649187 tc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12382 2 -     40692 tc
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33784 2 +     49394 tc
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58652 2 -     66874 tc
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7529 2 -     42923 tc
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14525 2 -     53142 tc
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27047 2 -    327341 tt
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 231
s Hipposideros_armiger.JXIK01000431.1                      1546605 2 -   1711038 tt
i Hipposideros_armiger.JXIK01000431.1                    I 21 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45921 2 +     49977 tt
i Hipposideros_galeritus.HipGal_scaffold_23202           I 20 C 0
s Hoolock_leuconedys.ctg274                                    138850 2 -    630532 tc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65722 2 +     83186 tt
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 5
s Hylobates_agilis.k141_1155965                               1883 2 +     12352 tc
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9066 2 +     55766 tc
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048405 2 + 191637585 tc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797737 2 +  11177569 tc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     535 2 -      1527 tc
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40185 2 +    110728 tc
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757173 2 +  30322482 tc
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         879 2 -     13097 tc
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            830 2 +      5940 tc
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         461 2 -      5717 tc
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7088 2 -     11567 tc
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8469 2 -     12945 tc
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5830 2 +     29618 tc
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5827 2 +     31569 tc
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5840 2 +     24756 tc
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5832 2 +     16388 tc
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810154 2 -   3914936 tt
i Leptonychotes_weddellii.KB714746.1                     C 0 I 5
s Loris_lydekkerianus.k141_2031736                            2820 2 +     19643 tc
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036478 2 -   6120653 tc
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611336 2 +  59628241 tt
i Lycaon_pictus.CM007581.1                               C 0 I 4
s Macaca_arctoides.k141_1757516                              41792 2 -     61512 tc
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369420 2 -  60120075 tc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21740 2 +     30207 tc
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18843 2 -     24934 tc
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21627 2 +     30527 tc
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32816 2 -     50087 tc
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42554 2 +     51645 tc
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411128 2 - 187317192 tc
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396011 2 +  25927173 tc
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45142 2 -     62418 tc
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21830 2 +     24253 tc
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41587 2 +     59329 tc
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267419 2 +    668171 tc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18765 2 +     21031 tc
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32498 2 +     33478 tc
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Manis_javanica.JSZB01003497.1                             670376 2 -    737560 tt
i Manis_javanica.JSZB01003497.1                          C 0 I 5
s Manis_pentadactyla.KN006162.1                             217670 2 +    317179 tt
i Manis_pentadactyla.KN006162.1                          C 0 I 5
s Megaderma_lyra.MegLyr_scaffold_4542                       146845 2 +    207569 tt
i Megaderma_lyra.MegLyr_scaffold_4542                    I 28 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             15078 2 -     74585 TT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 5
s Mico_argentatus.k141_582562                                 6848 2 +     17804 tc
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7621 2 -     12984 tc
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15583 2 -     26561 tc
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981442 2 +  93316391 tc
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181078 2 +    200668 tt
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 5 C 0
s Miopithecus_ogouensis.k141_1534655                         18886 2 -     27822 tc
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5164 2 +     27589 tt
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 5
s Mirza_zaza.k141_766280                                     49303 2 -     62432 tc
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175263 2 +    366855 tt
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 5 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   14816 2 -     63510 tt
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 200
s Murina_feae.MurFea_scaffold_17764                          34162 2 +     47283 TT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14344110 2 +  14710649 tt
i Mustela_putorius.JH418006.1                            C 0 I 5
s Myotis_brandtii.KE162005.1                               9788613 2 +  10118263 tt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4379025 2 +   6019432 tt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               378843 2 +   4330536 tt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        2564 2 +      3929 TT
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116592 2 +    130748 tc
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              25188 2 +     34575 tc
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465549 2 -  31847680 tt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 5
s Noctilio_leporinus.NocLep_scaffold_7894                   123694 2 -    149072 tt
i Noctilio_leporinus.NocLep_scaffold_7894                I 5 I 5
s Nomascus_annamensis.k141_1771965                           50135 2 -    132029 tc
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6231 2 -     16345 tc
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12114 2 +     22201 tc
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410451 2 -  22158432 tc
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22514 2 -     54323 tc
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194951 2 +   9404916 tt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 4
s Nycticebus_bengalensis.LG01                             93631594 2 + 196305487 tc
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              983 2 +      2758 tc
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559861 2 - 199412804 tc
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448333 2 +   2017862 tt
i Odobenus_rosmarus.KB229312.1                           C 0 I 5
s Otocyon_megalotis.JAEUCK010005147.1                        35999 2 +    559221 tt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 4
s Otolemur_crassicaudatus.k141_85057                         23085 2 -     23432 TC
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347650 2 +   1103335 TC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468345 2 - 189151597 tc
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20873 2 -    230217 tt
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 8
s Panthera_pardus.KV860321.1                              18458199 2 -  18783137 tt
i Panthera_pardus.KV860321.1                             C 0 I 8
s Panthera_tigris.KE722367.1                               3968925 2 +   8748460 tt
i Panthera_tigris.KE722367.1                             C 0 I 8
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11793 2 +     78924 tt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 3
s Perodicticus_ibeanus.k141_1921260                          21697 2 +     31479 tc
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14068 2 -     24908 tc
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5642 2 +      7560 tc
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61349 2 -     63152 tc
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43948 2 +     45295 tc
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1627 2 +      5735 TC
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46428 2 +     46691 tt
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61821 2 +    207309 tc
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2941 2 -     25401 tc
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28656 2 +     58159 tc
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28932 2 +     63561 tc
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28695 2 +     51148 tc
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553688 2 -   4542175 tc
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28679 2 +     51125 tc
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5097 2 +     39866 tc
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           184 2 -      9282 tc
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39585 2 -     87950 tc
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39978 2 -     88961 tc
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4677 2 -     39403 tc
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39631 2 +     87928 tc
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4675 2 -     60166 tc
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11611 2 -     67232 tc
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39527 2 -     90634 tc
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40995 2 +     89403 tc
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173962 2 - 189387572 TC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188960 2 -   9816681 tc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24125 2 +     69807 tc
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41320 2 -     80239 tc
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980329 2 +   4620579 tc
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562916 2 -   2598838 tc
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            558 2 -      7103 tc
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1158 2 -     11706 tc
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4893 2 -     30655 tc
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31218 2 +     46564 tc
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91509 2 -     98465 tc
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5127 2 +     35169 tc
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48322 2 -     66298 tt
i Pteronotus_parnellii.KE847780.1                        I 5 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_59017          5216 2 -     10349 tt
i Pteronura_brasiliensis.PteBra_flattened_line_59017     C 0 I 5
s Pteropus_alecto.KB030862.1                               5837301 2 -  28871421 tt
i Pteropus_alecto.KB030862.1                             I 64 C 0
s Pteropus_vampyrus.KN525825.1                             3533862 2 -   4952924 tt
i Pteropus_vampyrus.KN525825.1                           I 50 C 0
s Puma_concolor.QAVW01001104.1                            18095751 2 +  38429054 tt
i Puma_concolor.QAVW01001104.1                           C 0 I 8
s Pygathrix_cinerea.k141_1153803                             23513 2 +     91421 tc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150005 2 -   7812017 tc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4382 2 +     72585 tc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909939 2 +   3329780 tt
i Rhinolophus_sinicus.LVEH01000134.1                     I 27 C 0
s Rhinopithecus_bieti.k119_221883                            25346 2 +     27361 tc
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118696 2 + 195417433 TC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232954 2 -   7961872 tc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71324 2 -    116970 tt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 36 C 0
s Saguinus_bicolor.k141_1429097                                796 2 +     27962 tc
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              809 2 +      6077 tc
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              824 2 +      5971 tc
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                878 2 +      5932 tc
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1024 2 -      2099 tc
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388055 2 - 209938924 tc
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 825 2 +      5979 tc
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1208 2 -      4301 tc
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235265 2 +   5703754 tc
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4855 2 +     21866 tc
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112997 2 +    313613 tt
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21834 2 +     27374 tc
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25351 2 +     58920 tc
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11846 2 -     45317 tc
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19503 2 -     42441 tc
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22185 2 -     29113 tc
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25257 2 -     48123 tc
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855710 2 -   1910179 TC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3393 2 -     97271 tt
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 5
s Suricata_suricatta.SurSur_flattened_line_6629             121410 2 +    196729 tt
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 3
s Symphalangus_syndactylus.tarseq_199                       387432 2 +   1523678 tc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1463 2 -      2009 tc
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188058 2 +    199430 tt
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 5
s Tapirus_terrestris.TapTer_scaffold_755                    102013 2 -    539355 tt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 5
s Tarsius_lariang.k141_1780720                                4116 2 +      6850 tc
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4155 2 +     20590 tc
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16807 2 -     31044 tc
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476138 2 -    610378 tt
i Tonatia_saurophila.TonSau_scaffold_294                 I 5 C 0
s Trachypithecus_auratus.k141_1189070                        17398 2 +     26378 tc
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30079 2 -     78344 tc
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16719 2 +     25722 tc
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24942 2 -     62838 tc
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25059 2 +     46913 tc
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5869 2 -     28527 tc
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26881 2 -     64340 tc
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24918 2 -     63452 tc
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6360 2 +     22490 tc
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3971 2 +      4141 tc
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6786 2 -     13050 tc
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252021 2 -   6242583 tc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57753 2 +     59866 tc
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1829725 2 -   4065304 tc
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4268 2 -     70247 TC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104221 2 -    105689 tt
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178276 2 +   5085361 tt
i Ursus_maritimus.KK499267.1                             C 0 I 13
s Varecia_rubra.k141_787544                                  21969 2 -     30710 tc
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20876 2 -    147434 tc
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101716 2 -    112863 tt
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 5
s Zalophus_californianus.ZalCal_flattened_line_17732         25553 2 -     86975 tt
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 5
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Theropithecus_gelada.CM009954.1                           349724 0 - 186847797 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Papio_ursinus.k141_2278143                                 18805 0 -     23640 C
e Papio_papio.k141_799093                                    11995 0 +     16796 C
e Papio_kindae.k141_2214839                                  18859 0 -     27687 C
e Papio_hamadryas.Contig39                                  287243 0 -  20919399 C
e Papio_cynocephalus.k141_1507553                             6206 0 +     21308 C
e Papio_anubis.CM001495.2                                   239739 0 - 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Mandrillus_sphinx.Contig270                               353727 0 -    752769 C
e Mandrillus_leucophaeus.scaffold280                        318895 0 +  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                219726 71 -    270270 I
e Loxodonta_africana.GL010049.1                           39077361 28 +  43346337 I
e Lophocebus_aterrimus.ctg367                               329512 0 -   1826925 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Cercocebus_torquatus.k141_2159127                          41111 0 -    148725 C
e Cercocebus_lunulatus.k141_2779015                          41129 0 -     44860 C
e Cercocebus_chrysogaster.k141_1522556                       41297 0 +     47900 C
e Cercocebus_atys.KQ010504.1                                137557 0 -   4669795 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1104 1 +     36723 T
s Acinonyx_jubatus.LLWD01001279.1                           809507 1 +   1699592 t
i Acinonyx_jubatus.LLWD01001279.1                        I 8 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411634 1 +  29979442 t
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 46 I 2
s Allenopithecus_nigroviridis.k141_3755588                   44399 1 +     53615 t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40214 1 +     44087 t
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         12918 1 -     21945 T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14596 1 +     32033 T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69142 1 -     84148 t
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41365 1 -     78289 t
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40813 1 +     55831 t
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39254 1 -     64179 t
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20897 1 -     24835 t
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37880 1 +     45454 t
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43579 1 +     70886 t
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5706 1 +     30854 t
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29845 1 +     42133 t
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173110 1 -    412891 t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   47654 1 -     65372 t
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41399 1 +     43593 t
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669412 1 +   5030052 T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21054 1 -     23494 t
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6190 1 +      8415 t
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16257 1 -     45910 t
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   938 1 -     15198 t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271640 1 +  21539123 t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7811 1 +     48076 t
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2945 1 -     28759 t
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30497 1 +     44353 t
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45872 1 -     71267 t
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19928 1 -     33135 t
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3049 1 +     11645 t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3051 1 -     19611 t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4832 1 +     28062 t
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40126 1 -     91139 t
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17652 1 +     95584 t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17565 1 +    119600 t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7066 1 +     18648 t
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6741 1 -     13885 t
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15428 1 +     17162 t
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450384 1 + 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16677 1 -     18408 t
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502071 1 +  60362399 t
i CanFam4.chr16                                          I 4 I 2
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5701 1 -     23171 t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 4 I 2
s Canis_lupus_dingo.QKWQ01000480.1                          219062 1 +   9314153 T
i Canis_lupus_dingo.QKWQ01000480.1                       I 4 I 2
s Canis_lupus_familiaris.chr16                            41612187 1 +  59632846 t
i Canis_lupus_familiaris.chr16                           I 4 I 2
s Canis_lupus_orion.HG994398.1                            45103757 1 -  63665305 T
i Canis_lupus_orion.HG994398.1                           I 4 I 2
s Carlito_syrichta.NW_007259797.1                           267427 1 +    496798 T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                998 1 +      5315 t
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cebuella_niveiventris.k141_592277                           1962 1 -     12580 t
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39848 1 +     53515 t
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368044 1 -  26074798 t
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4933 1 -     34880 t
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64028 1 -     89041 t
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            594 1 -      1636 t
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489048 1 -  27778364 t
i Ceratotherium_simum.JH767749.1                         I 5 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15881 1 +     27315 t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 5 C 0
s Cercocebus_atys.KQ010504.1                                137557 1 -   4669795 T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41297 1 +     47900 t
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41129 1 -     44860 t
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41111 1 -    148725 t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24173 1 -     40656 t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4108 1 +     20796 t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8363 1 -     17524 t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24052 1 -     34525 t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8763 1 -     25376 t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361328 1 -  39242232 t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267073 1 +  21565898 t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28526 1 -     45857 t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24317 1 -     32606 t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          504 1 +      8499 t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22016 1 +     70610 t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18881 1 +     36323 t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9827 1 -     19938 t
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             27479 1 -     33796 t
i Cheirogaleus_major.k141_666340                         I 8 C 0
s Cheirogaleus_medius.k141_759766                             1666 1 -     15404 t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5925 1 -     32913 t
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16338 1 -     40346 t
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16602 1 +    216457 t
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16381 1 +     39636 t
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            800 1 +      5346 t
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39472 1 -    112038 t
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5044 1 +     34062 t
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339777 1 +  18827391 t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6388 1 -     44032 t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301103 1 - 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405652 1 -   2368649 T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374811 1 - 200372422 t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5536 1 -      6605 t
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803950 1 +  53390261 C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9362 1 +     10921 t
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2106035 1 -   2246927 t
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1109
s Daubentonia_madagascariensis.ctg71                        289491 1 +  12879189 t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661334 1 -   1390856 t
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 5 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136124 1 -    198055 t
i Diceros_bicornis.DicBicMic_scaffold_5955               I 5 C 0
s Eidolon_helvum.AWHC01266696.1                               2721 1 +     19438 t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Enhydra_lutris.KZ291758.1                               24907042 1 +  41312741 t
i Enhydra_lutris.KZ291758.1                              I 5 I 5765
s Eptesicus_fuscus.JH977646.1                             12574261 1 +  14770903 t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3038293 1 -   4378816 t
i Equus_asinus.JREZ01000139.1                            I 5 C 0
s Equus_caballus.CM000403.2                               21372227 1 +  39960074 t
i Equus_caballus.CM000403.2                              I 5 C 0
s Equus_przewalskii.KK951119.1                              409013 1 -    498745 t
i Equus_przewalskii.KK951119.1                           I 5 C 0
s Erythrocebus_patas.Contig38                               259335 1 +  21539334 t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12455 1 -     24895 t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40167 1 -     70999 t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84127 1 +    112731 t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40699 1 +     68309 t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51024 1 -     65740 t
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21654 1 -     75513 t
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45847 1 -     97555 t
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2574 1 +     30972 t
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40297 1 -     52037 t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56698 1 -    111500 t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186243164 1 - 206538554 t
i Felis_catus.CM001381.2                                 I 7 I 2
s Felis_catus_fca126.CM031415.1                          185112946 1 - 205367284 t
i Felis_catus_fca126.CM031415.1                          I 7 I 2
s Felis_nigripes.FelNig_flattened_line_31944                 24294 1 -     30238 t
i Felis_nigripes.FelNig_flattened_line_31944             I 7 I 2
s Galago_moholi.ctg3793                                     119812 1 -    137831 T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3352 1 +     22493 T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16821 1 +     32986 T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15656 1 +     18121 t
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1458 1 -      8343 t
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250958 1 - 186649187 t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12384 1 -     40692 t
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33786 1 +     49394 t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58654 1 -     66874 t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7531 1 -     42923 t
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14527 1 -     53142 t
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27280 1 -    327341 t
i Helogale_parvula.HelPar_flattened_line_2585            I 231 I 2
s Hipposideros_armiger.JXIK01000431.1                      1546607 1 -   1711038 a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45923 1 +     49977 t
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138852 1 -    630532 t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65729 1 +     83186 t
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 5 I 2
s Hylobates_agilis.k141_1155965                               1885 1 +     12352 t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9068 1 +     55766 t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048407 1 + 191637585 t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797739 1 +  11177569 t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     537 1 -      1527 t
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40187 1 +    110728 t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757175 1 +  30322482 t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         881 1 -     13097 t
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            832 1 +      5940 t
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         463 1 -      5717 t
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7090 1 -     11567 t
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8471 1 -     12945 t
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5832 1 +     29618 t
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5829 1 +     31569 t
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5842 1 +     24756 t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5834 1 +     16388 t
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810161 1 -   3914936 t
i Leptonychotes_weddellii.KB714746.1                     I 5 I 2
s Lophocebus_aterrimus.ctg367                               329512 1 -   1826925 t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2822 1 +     19643 t
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036480 1 -   6120653 t
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611342 1 +  59628241 t
i Lycaon_pictus.CM007581.1                               I 4 I 2
s Macaca_arctoides.k141_1757516                              41794 1 -     61512 t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369422 1 -  60120075 t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21742 1 +     30207 t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18845 1 -     24934 t
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21629 1 +     30527 t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32818 1 -     50087 t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42556 1 +     51645 t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411130 1 - 187317192 t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396013 1 +  25927173 t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45144 1 -     62418 t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21832 1 +     24253 t
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41589 1 +     59329 t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267421 1 +    668171 t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18767 1 +     21031 t
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32500 1 +     33478 t
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318895 1 +  24302211 t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353727 1 -    752769 t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670383 1 -    737560 t
i Manis_javanica.JSZB01003497.1                          I 5 C 0
s Manis_pentadactyla.KN006162.1                             217677 1 +    317179 g
i Manis_pentadactyla.KN006162.1                          I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146847 1 +    207569 a
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             15085 1 -     74585 t
i Mellivora_capensis.MelCap_flattened_line_19308         I 5 I 7593
s Mico_argentatus.k141_582562                                 6850 1 +     17804 t
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7623 1 -     12984 t
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15585 1 -     26561 t
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981444 1 +  93316391 t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181080 1 +    200668 t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         18888 1 -     27822 t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5171 1 +     27589 t
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 5 I 2
s Mirza_zaza.k141_766280                                     49305 1 -     62432 t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175265 1 +    366855 t
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_18455                   15018 1 -     63510 t
i Mungos_mungo.MunMun_flattened_line_18455               I 200 I 2
s Murina_feae.MurFea_scaffold_17764                          34164 1 +     47283 C
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14344117 1 +  14710649 t
i Mustela_putorius.JH418006.1                            I 5 I 7499
s Myotis_brandtii.KE162005.1                               9788615 1 +  10118263 c
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4379027 1 +   6019432 c
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               378845 1 +   4330536 c
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        2566 1 +      3929 C
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116594 1 +    130748 t
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              25190 1 +     34575 t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465556 1 -  31847680 t
i Neomonachus_schauinslandi.NINY01007730.1               I 5 I 2
s Noctilio_leporinus.NocLep_scaffold_7894                   123701 1 -    149072 t
i Noctilio_leporinus.NocLep_scaffold_7894                I 5 C 0
s Nomascus_annamensis.k141_1771965                           50137 1 -    132029 t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6233 1 -     16345 t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12116 1 +     22201 t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410453 1 -  22158432 t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22516 1 -     54323 t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194957 1 +   9404916 t
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 4 I 2
s Nycticebus_bengalensis.LG01                             93631596 1 + 196305487 t
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              985 1 +      2758 t
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559863 1 - 199412804 t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448340 1 +   2017862 t
i Odobenus_rosmarus.KB229312.1                           I 5 I 2
s Otocyon_megalotis.JAEUCK010005147.1                        36005 1 +    559221 t
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 I 2
s Otolemur_crassicaudatus.k141_85057                         23087 1 -     23432 T
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347652 1 +   1103335 T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468347 1 - 189151597 t
i Pan_troglodytes.CM009242.2                             C 0 I 31
s Panthera_onca.PanOnc_flattened_line_3271                   20883 1 -    230217 t
i Panthera_onca.PanOnc_flattened_line_3271               I 8 I 2
s Panthera_pardus.KV860321.1                              18458209 1 -  18783137 t
i Panthera_pardus.KV860321.1                             I 8 I 2
s Panthera_tigris.KE722367.1                               3968935 1 +   8748460 t
i Panthera_tigris.KE722367.1                             I 8 I 2
s Papio_anubis.CM001495.2                                   239739 1 - 183742232 t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6206 1 +     21308 t
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287243 1 -  20919399 t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18859 1 -     27687 t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11995 1 +     16796 t
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18805 1 -     23640 t
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11798 1 +     78924 t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 I 2
s Perodicticus_ibeanus.k141_1921260                          21699 1 +     31479 t
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14070 1 -     24908 t
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5644 1 +      7560 t
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61351 1 -     63152 t
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43950 1 +     45295 t
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1629 1 +      5735 T
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46430 1 +     46691 t
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 C 0
s Pithecia_albicans.k141_1239476                             61823 1 +    207309 t
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2943 1 -     25401 t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28658 1 +     58159 t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28934 1 +     63561 t
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28697 1 +     51148 t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553690 1 -   4542175 t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28681 1 +     51125 t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5099 1 +     39866 t
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           186 1 -      9282 t
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39587 1 -     87950 t
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39980 1 -     88961 t
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4679 1 -     39403 t
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39633 1 +     87928 t
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4677 1 -     60166 t
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11613 1 -     67232 t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39529 1 -     90634 t
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40997 1 +     89403 t
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173964 1 - 189387572 T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188962 1 -   9816681 t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24127 1 +     69807 t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41322 1 -     80239 t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980331 1 +   4620579 t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562918 1 -   2598838 t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            560 1 -      7103 t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1160 1 -     11706 t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4895 1 -     30655 t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31220 1 +     46564 t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91511 1 -     98465 t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5129 1 +     35169 t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48324 1 -     66298 t
i Pteronotus_parnellii.KE847780.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_59017          5223 1 -     10349 t
i Pteronura_brasiliensis.PteBra_flattened_line_59017     I 5 N 0
s Pteropus_alecto.KB030862.1                               5837303 1 -  28871421 t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533864 1 -   4952924 t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095761 1 +  38429054 t
i Puma_concolor.QAVW01001104.1                           I 8 I 2
s Pygathrix_cinerea.k141_1153803                             23515 1 +     91421 t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150007 1 -   7812017 t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4384 1 +     72585 t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909941 1 +   3329780 t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            25348 1 +     27361 t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118698 1 + 195417433 T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232956 1 -   7961872 t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71326 1 -    116970 t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                798 1 +     27962 t
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              811 1 +      6077 t
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              826 1 +      5971 c
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                880 1 +      5932 c
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1026 1 -      2099 c
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388057 1 - 209938924 t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 827 1 +      5979 c
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1210 1 -      4301 t
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235267 1 +   5703754 t
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4857 1 +     21866 t
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    112999 1 +    313613 c
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21836 1 +     27374 t
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25353 1 +     58920 t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11848 1 -     45317 t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19505 1 -     42441 t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22187 1 -     29113 t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25259 1 -     48123 t
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855712 1 -   1910179 T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3400 1 -     97271 t
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 I 2
s Suricata_suricatta.SurSur_flattened_line_6629             121415 1 +    196729 t
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 I 2
s Symphalangus_syndactylus.tarseq_199                       387434 1 +   1523678 t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1465 1 -      2009 t
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188065 1 +    199430 t
i Tapirus_indicus.TapInd_scaffold_7432                   I 5 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102020 1 -    539355 t
i Tapirus_terrestris.TapTer_scaffold_755                 I 5 C 0
s Tarsius_lariang.k141_1780720                                4118 1 +      6850 t
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4157 1 +     20590 t
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349724 1 - 186847797 t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16809 1 -     31044 t
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476140 1 -    610378 t
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        17400 1 +     26378 t
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30081 1 -     78344 t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16721 1 +     25722 t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24944 1 -     62838 t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25061 1 +     46913 t
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5871 1 -     28527 t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26883 1 -     64340 t
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24920 1 -     63452 t
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6362 1 +     22490 t
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3973 1 +      4141 t
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6788 1 -     13050 t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252023 1 -   6242583 t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57755 1 +     59866 t
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1829727 1 -   4065304 t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4270 1 -     70247 t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104223 1 -    105689 t
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178291 1 +   5085361 t
i Ursus_maritimus.KK499267.1                             I 13 I 2
s Varecia_rubra.k141_787544                                  21971 1 -     30710 t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20878 1 -    147434 t
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101723 1 -    112863 t
i Vulpes_lagopus.VulLag_flattened_line_12041             I 5 I 2
s Zalophus_californianus.ZalCal_flattened_line_17732         25560 1 -     86975 t
i Zalophus_californianus.ZalCal_flattened_line_17732     I 5 I 2
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                219726 71 -    270270 I
e Loxodonta_africana.GL010049.1                           39077361 28 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129               733 6 +     87169 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1105 4 +     36723 CTT-T
s Acinonyx_jubatus.LLWD01001279.1                           809510 4 +   1699592 tta-a
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411637 4 +  29979442 tta-a
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 2 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44400 4 +     53615 ctt-t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40215 4 +     44087 ctt-t
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         12919 4 -     21945 CTT-T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14597 4 +     32033 CTT-T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69143 4 -     84148 ctt-t
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41366 4 -     78289 ctt-t
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40814 4 +     55831 ctt-t
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39255 4 -     64179 ctt-t
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20898 4 -     24835 ctt-t
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37881 4 +     45454 ctt-t
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43580 4 +     70886 ctt-t
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5707 4 +     30854 ctt-t
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29846 4 +     42133 ctt-t
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173111 4 -    412891 ttt-a
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   47655 4 -     65372 ctt-t
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41400 4 +     43593 ctt-t
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669413 4 +   5030052 CTT-T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21055 4 -     23494 ctt-t
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6191 4 +      8415 ctt-t
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16258 4 -     45910 ctt-t
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   939 4 -     15198 ttt-a
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271641 4 +  21539123 ctt-t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7812 4 +     48076 ctt-t
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2946 4 -     28759 ctt-t
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30498 4 +     44353 ctt-t
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45873 4 -     71267 ctt-t
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19929 4 -     33135 ctt-t
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3050 4 +     11645 ctt-t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3052 4 -     19611 ctt-t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4833 4 +     28062 ctt-t
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40127 4 -     91139 ctt-t
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17653 4 +     95584 ctt-t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17566 4 +    119600 ctt-t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7067 4 +     18648 ctt-t
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6742 4 -     13885 ctt-t
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15429 4 +     17162 ctt-t
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450385 4 + 189096842 CTT-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16678 4 -     18408 ctt-t
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502074 4 +  60362399 ttt-g
i CanFam4.chr16                                          I 2 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5704 4 -     23171 ttt-g
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 2 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219065 4 +   9314153 TTT-G
i Canis_lupus_dingo.QKWQ01000480.1                       I 2 C 0
s Canis_lupus_familiaris.chr16                            41612190 4 +  59632846 ttt-g
i Canis_lupus_familiaris.chr16                           I 2 C 0
s Canis_lupus_orion.HG994398.1                            45103760 4 -  63665305 TTT-G
i Canis_lupus_orion.HG994398.1                           I 2 C 0
s Carlito_syrichta.NW_007259797.1                           267428 4 +    496798 CTT-T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178                999 4 +      5315 ttt-a
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cebuella_niveiventris.k141_592277                           1963 4 -     12580 ctt-t
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39849 4 +     53515 ctt-t
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368045 4 -  26074798 ctt-t
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4934 4 -     34880 ctt-t
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64029 4 -     89041 ctt-t
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            595 4 -      1636 ctt-t
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489049 4 -  27778364 ttt-a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15882 4 +     27315 ttt-a
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137558 4 -   4669795 CTT-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41298 4 +     47900 ctt-t
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41130 4 -     44860 ctt-t
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41112 4 -    148725 ctt-t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24174 4 -     40656 ctt-t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4109 4 +     20796 ctt-t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8364 4 -     17524 cct-t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24053 4 -     34525 ctt-t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8764 4 -     25376 ctt-t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361329 4 -  39242232 ctt-t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267074 4 +  21565898 ctt-t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28527 4 -     45857 ctt-t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24318 4 -     32606 ctt-t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          505 4 +      8499 ctt-t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22017 4 +     70610 ctt-t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18882 4 +     36323 ctt-t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9828 4 -     19938 ttt-t
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             27480 4 -     33796 ctt-t
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1667 4 -     15404 ctt-t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5926 4 -     32913 ctt-t
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16339 4 -     40346 ctt-t
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16603 4 +    216457 ctt-t
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16382 4 +     39636 ctt-t
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            801 4 +      5346 ctt-t
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39473 4 -    112038 ctt-t
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5045 4 +     34062 ctt-t
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339778 4 +  18827391 ctt-t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6389 4 -     44032 ctt-t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301104 4 - 135778131 ctt-t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405653 4 -   2368649 CTT-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374812 4 - 200372422 ctt-t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5537 4 -      6605 ctt-t
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803951 4 +  53390261 TAT-T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9363 4 +     10921 ttt-a
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               739 4 +     87169 tta-a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 6 C 0
s Dasypus_novemcinctus.JH564415.1                          2107145 4 -   2246927 ttt-t
i Dasypus_novemcinctus.JH564415.1                        I 1109 C 0
s Daubentonia_madagascariensis.ctg71                        289492 4 +  12879189 ctt-t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661335 4 -   1390856 ttt-a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136125 4 -    198055 ttt-a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2722 4 +     19438 ttt-a
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Enhydra_lutris.KZ291758.1                               24912808 4 +  41312741 tta-a
i Enhydra_lutris.KZ291758.1                              I 5765 C 0
s Eptesicus_fuscus.JH977646.1                             12574262 1 +  14770903 t----
i Eptesicus_fuscus.JH977646.1                            C 0 I 3
s Equus_asinus.JREZ01000139.1                              3038294 4 -   4378816 ttt-a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21372228 4 +  39960074 ttt-g
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409014 4 -    498745 ttt-a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               259336 4 +  21539334 ctt-t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12456 4 -     24895 ctt-t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40168 4 -     70999 ctt-t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84128 4 +    112731 ctt-t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40700 4 +     68309 ctt-t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51025 4 -     65740 ctt-t
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21655 4 -     75513 ctt-t
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45848 4 -     97555 ctt-t
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2575 4 +     30972 ctt-t
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40298 4 -     52037 ctt-t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56699 4 -    111500 ctt-t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186243167 4 - 206538554 tta-a
i Felis_catus.CM001381.2                                 I 2 C 0
s Felis_catus_fca126.CM031415.1                          185112949 4 - 205367284 tta-a
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24297 4 -     30238 tta-a
i Felis_nigripes.FelNig_flattened_line_31944             I 2 C 0
s Galago_moholi.ctg3793                                     119813 4 -    137831 CTT-T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3353 4 +     22493 CTT-T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16822 4 +     32986 CTT-T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15657 4 +     18121 tct-t
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1459 4 -      8343 ctt-t
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250959 4 - 186649187 ctt-t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12385 4 -     40692 ctt-t
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33787 4 +     49394 ctt-t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58655 4 -     66874 ctt-t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7532 4 -     42923 ctt-t
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14528 4 -     53142 ctt-t
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27283 4 -    327341 tta-a
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546608 4 -   1711038 ttt-t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45924 4 +     49977 ttt-t
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138853 4 -    630532 ctt-t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65732 4 +     83186 tta-a
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 2 C 0
s Hylobates_agilis.k141_1155965                               1886 4 +     12352 ctt-t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9069 4 +     55766 ctt-t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048408 4 + 191637585 ctt-t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797740 4 +  11177569 ctt-t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     538 4 -      1527 ctt-t
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40188 4 +    110728 ctt-t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757176 4 +  30322482 ctt-t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         882 4 -     13097 ctt-t
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            833 4 +      5940 ctt-t
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         464 4 -      5717 ctt-t
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7091 4 -     11567 ctt-t
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8472 4 -     12945 ctt-t
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5833 4 +     29618 ctt-t
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5830 4 +     31569 ctt-t
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5843 4 +     24756 ctt-t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5835 4 +     16388 ctt-t
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810164 4 -   3914936 ttt-a
i Leptonychotes_weddellii.KB714746.1                     I 2 C 0
s Lophocebus_aterrimus.ctg367                               329513 4 -   1826925 ctt-t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2823 4 +     19643 ctt-t
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036481 4 -   6120653 ctt-t
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611345 4 +  59628241 ttt-g
i Lycaon_pictus.CM007581.1                               I 2 C 0
s Macaca_arctoides.k141_1757516                              41795 4 -     61512 ctt-t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369423 4 -  60120075 ctt-t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21743 4 +     30207 ctt-t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18846 4 -     24934 ctt-t
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21630 4 +     30527 ctt-t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32819 4 -     50087 ctt-t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42557 4 +     51645 ctt-t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411131 4 - 187317192 ctt-t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396014 4 +  25927173 ctt-t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45145 4 -     62418 ctt-t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21833 4 +     24253 ctt-t
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41590 4 +     59329 ctt-t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267422 4 +    668171 ctt-t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18768 4 +     21031 ctt-t
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32501 4 +     33478 ctt-t
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318896 4 +  24302211 ctt-t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353728 4 -    752769 ctt-t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670384 4 -    737560 ctt-g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217678 4 +    317179 ctt-g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146848 4 +    207569 ttt-a
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             22679 4 -     74585 TTA-A
i Mellivora_capensis.MelCap_flattened_line_19308         I 7593 C 0
s Mico_argentatus.k141_582562                                 6851 4 +     17804 ctt-t
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7624 4 -     12984 ctt-t
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15586 4 -     26561 ctt-t
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981445 4 +  93316391 ctt-t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181081 4 +    200668 cta-a
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         18889 4 -     27822 ctt-t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5174 4 +     27589 ttt-a
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 2 C 0
s Mirza_zaza.k141_766280                                     49306 4 -     62432 ctt-t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175267 4 +    366855 ttt-a
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15021 4 -     63510 taa-a
i Mungos_mungo.MunMun_flattened_line_18455               I 2 C 0
s Murina_feae.MurFea_scaffold_17764                          34165 1 +     47283 T----
i Murina_feae.MurFea_scaffold_17764                      C 0 I 3
s Mustela_putorius.JH418006.1                             14351617 4 +  14710649 tta-a
i Mustela_putorius.JH418006.1                            I 7499 C 0
s Myotis_brandtii.KE162005.1                               9788616 1 +  10118263 t----
i Myotis_brandtii.KE162005.1                             C 0 I 4
s Myotis_davidii.KB100139.1                                4379028 1 +   6019432 t----
i Myotis_davidii.KB100139.1                              C 0 I 4
s Myotis_lucifugus.GL429869.1                               378846 1 +   4330536 t----
i Myotis_lucifugus.GL429869.1                            C 0 I 4
s Myotis_myotis.MyoMyo_scaffold_185951                        2567 1 +      3929 t----
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116595 4 +    130748 ctt-t
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              25191 4 +     34575 ctt-t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465559 4 -  31847680 ttt-a
i Neomonachus_schauinslandi.NINY01007730.1               I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   123702 4 -    149072 ttt-a
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           50138 4 -    132029 ctt-t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6234 4 -     16345 ctt-t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12117 4 +     22201 ctt-t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410454 4 -  22158432 ctt-t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22517 4 -     54323 ctt-t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194960 4 +   9404916 ttt-g
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 2 C 0
s Nycticebus_bengalensis.LG01                             93631597 4 + 196305487 ctt-t
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              986 4 +      2758 ctt-t
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559864 4 - 199412804 ctt-t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448343 4 +   2017862 ttt-a
i Odobenus_rosmarus.KB229312.1                           I 2 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36008 4 +    559221 ttt-g
i Otocyon_megalotis.JAEUCK010005147.1                    I 2 C 0
s Otolemur_crassicaudatus.k141_85057                         23088 4 -     23432 CTT-T
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347653 4 +   1103335 CTT-T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.NBAG03003091.1                              7884 4 -     26668 tct-t
i Pan_troglodytes.NBAG03003091.1                         n 31 I 2503
s Panthera_onca.PanOnc_flattened_line_3271                   20886 5 -    230217 ttaaa
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                              18458212 5 -  18783137 ttaaa
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               3968938 4 +   8748460 tta-a
i Panthera_tigris.KE722367.1                             I 2 C 0
s Papio_anubis.CM001495.2                                   239740 4 - 183742232 ctt-t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6207 4 +     21308 ctt-t
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287244 4 -  20919399 ctt-t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18860 4 -     27687 ctt-t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    11996 4 +     16796 ctt-t
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18806 4 -     23640 ctt-t
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11801 4 +     78924 ttg-a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Perodicticus_ibeanus.k141_1921260                          21700 4 +     31479 ctt-t
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14071 4 -     24908 ctt-t
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5645 4 +      7560 ctt-t
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61352 4 -     63152 ctt-t
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43951 4 +     45295 ctt-t
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1630 4 +      5735 CTT-T
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46431 1 +     46691 t----
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        C 0 I 3
s Pithecia_albicans.k141_1239476                             61824 4 +    207309 ctt-t
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2944 4 -     25401 ctt-t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28659 4 +     58159 ctt-t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28935 4 +     63561 ctt-t
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28698 4 +     51148 ctt-t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553691 4 -   4542175 ctt-t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28682 4 +     51125 ctt-t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5100 4 +     39866 ctt-t
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           187 4 -      9282 ctt-t
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39588 4 -     87950 ctt-t
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39981 4 -     88961 ctt-t
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4680 4 -     39403 ctt-t
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39634 4 +     87928 ctt-t
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4678 4 -     60166 ctt-t
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11614 4 -     67232 ctt-t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39530 4 -     90634 ctt-t
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          40998 4 +     89403 ctt-t
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173965 4 - 189387572 CTT-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188963 4 -   9816681 ctt-t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24128 4 +     69807 ctt-t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41323 4 -     80239 ctt-t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980332 4 +   4620579 ctt-t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562919 4 -   2598838 ctt-t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            561 4 -      7103 ctt-t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1161 4 -     11706 ctt-t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4896 4 -     30655 ctt-t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31221 4 +     46564 ctt-t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91512 4 -     98465 ctt-t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5130 4 +     35169 ctt-t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48326 4 -     66298 tct-g
i Pteronotus_parnellii.KE847780.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1400 4 -     18639 TTA-A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     N 0 C 0
s Pteropus_alecto.KB030862.1                               5837304 4 -  28871421 tta-a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533865 4 -   4952924 tta-a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095764 4 +  38429054 tta-a
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             23516 4 +     91421 ctt-t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150008 4 -   7812017 ctt-t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4385 4 +     72585 ctt-t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909942 4 +   3329780 ttt-t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            25349 4 +     27361 ctt-t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118699 4 + 195417433 CTT-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232957 4 -   7961872 ctt-t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71327 4 -    116970 ttt-a
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                799 4 +     27962 ctt-t
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              812 4 +      6077 ctt-t
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              827 3 +      5971 c-t-t
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                881 4 +      5932 ctt-t
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1027 4 -      2099 ctt-t
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388058 4 - 209938924 ctt-t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 828 4 +      5979 ctt-t
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1211 4 -      4301 ctt-t
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235268 4 +   5703754 ctt-t
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4858 4 +     21866 ctt-t
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113000 4 +    313613 ttt-t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21837 4 +     27374 ctt-t
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25354 4 +     58920 ctt-t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11849 4 -     45317 ctt-t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19506 4 -     42441 ctt-t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22188 4 -     29113 ctt-t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25260 4 -     48123 ctt-t
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855713 4 -   1910179 TTT-T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3403 4 -     97271 tta-a
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 2 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121418 4 +    196729 tta-a
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Symphalangus_syndactylus.tarseq_199                       387435 4 +   1523678 ctt-t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1466 4 -      2009 ctt-t
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188066 4 +    199430 ttc-a
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102021 4 -    539355 ttc-a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4119 4 +      6850 ctt-t
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4158 4 +     20590 ctt-t
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349725 4 - 186847797 ctt-t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16810 4 -     31044 ttt-t
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476141 4 -    610378 ttt-a
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        17401 4 +     26378 ctt-t
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30082 4 -     78344 ctt-t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16722 4 +     25722 ctt-t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24945 4 -     62838 ctt-t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25062 4 +     46913 ctt-t
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5872 4 -     28527 ctt-t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26884 4 -     64340 ctt-t
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24921 4 -     63452 ctt-t
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6363 4 +     22490 ctt-t
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3974 4 +      4141 ctt-t
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6789 4 -     13050 ctt-t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252024 4 -   6242583 ctt-t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57756 4 +     59866 ctt-t
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1829728 4 -   4065304 ttt-t
i Tupaia_chinensis.KB320699.1                            C 0 I 274
s Tupaia_tana.TupTan_flattened_line_394                       4271 4 -     70247 ttt-t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 282
s Uropsilus_gracilis.UroGra_scaffold_7153                   104224 4 -    105689 ttt-t
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178294 4 +   5085361 tta-a
i Ursus_maritimus.KK499267.1                             I 2 C 0
s Varecia_rubra.k141_787544                                  21972 4 -     30710 ctt-t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20879 4 -    147434 ctt-t
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101726 4 -    112863 ttt-g
i Vulpes_lagopus.VulLag_flattened_line_12041             I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25563 4 -     86975 ttt-a
i Zalophus_californianus.ZalCal_flattened_line_17732     I 2 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                219726 71 -    270270 I
e Loxodonta_africana.GL010049.1                           39077361 28 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1109 27 +     36723 TT-TA------AGAGC--GG----CTTGA-T-----------------------TAAA-------G-------GAT--C-T
s Acinonyx_jubatus.LLWD01001279.1                           809514 42 +   1699592 t---gaa----aggct--tgatc-ttttt-t---------cctga--------c---agactaagg-----gattt--t-t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411641 43 +  29979442 t---gaa----agact--tgatc-ctttt-t-------g-c-tga--------c---agactaaag-----gattt--ttt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44404 25 +     53615 tt-ta--------agt--gg----ttcaa-t-----------------------taaa-------g-------gat--a-t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40219 25 +     44087 tt-ta--------agt--gg----ctcaa-t-----------------------taaa-------g-------gat--a-t
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         12923 25 -     21945 TT-TA--------AGT--GG----CTCAA-T-----------------------TAAA-------G-------GAT--A-T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14601 25 +     32033 TT-TA--------AGT--GG----CTCAA-T-----------------------TAAA-------G-------GAT--A-T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69147 44 -     84148 tt-ta------tgagt--ga----cttga-ttccttttt-c-tga-cgg---actaaa-------g-------gat--t-t
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41370 44 -     78289 tt-ta------tgagt--ga----cttga-ttccttttt-c-tga-cgg---actaaa-------g-------gat--t-t
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40818 44 +     55831 tt-ta------tgagt--ga----cttga-ttccttttt-c-tga-cgg---actaaa-------g-------gat--t-t
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39259 44 -     64179 tt-ta------tgagt--ga----cttga-ttccttttt-c-tga-cgg---actaaa-------g-------gat--t-t
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20902 44 -     24835 tt-ta------tgagt--ga----cttga-ttccttttt-c-tga-cgg---actaaa-------g-------gat--t-t
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37885 44 +     45454 tt-ta------tgagt--ga----cttga-ttccttttt-c-tga-cgg---actaaa-------g-------gat--t-t
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43584 44 +     70886 tt-ta------tgagt--ga----cttga-ttccttttt-c-tga-cgg---actaaa-------g-------gat--t-t
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5711 44 +     30854 tt-ta------tgagt--ga----cttga-ttccttttt-c-tga-cgg---actaaa-------g-------gat--t-t
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29850 44 +     42133 tt-ta------tgagt--ga----cttga-ttccttttt-c-tga-cgg---actaaa-------g-------gat--t-t
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173115 40 -    412891 t---ga----gagact--tgatc-ctttt-t---------c-t--t-ggt-------agactaaag-------gat--t-t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   47659 44 -     65372 tt-ta------tgaat--ga----cttga-ttcctttt--cctaacag----actaaa-------g-------gat--t-t
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41404 44 +     43593 tt-ta------tgaat--ga----cttga-ttcctttt--cctaacag----actaaa-------g-------gat--t-t
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669417 44 +   5030052 TT-TA------TGAAT--GA----CTTGA-T-----TCC-TTTTCCTAAGAGACTAaa-------g-------gat--t-t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21059 44 -     23494 tt-ta------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6195 44 +      8415 tt-ta------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16262 50 -     45910 tt-ta------tgagc--ga----cttcatttatttttt-cctgataggttggctaaa-------g-------gat--t-t
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   943 40 -     15198 t---ga----gagact--tgatc-ctctt-t---------cctg---g-t-------agactaaag-------gat--t-t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271645 44 +  21539123 tt-ta------tgagt--ga----cttga-tt-tctttt-cctgacag----actaaa-------g-------gat--t-t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7816 44 +     48076 tt-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2950 44 -     28759 tt-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30502 44 +     44353 tt-ta------tgagt--ga----cttga-tt-tctttt-cctgacag----actaaa-------g-------gat--t-t
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45877 44 -     71267 tt-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19933 44 -     33135 tt-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3054 44 +     11645 tt-ta------taaat--ga----cttga-ttctttttt-c-tgaaag----actaaa-------g-------gatt-t--
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3056 44 -     19611 tt-ta------taaat--ga----cttga-ttctttttt-c-tgaaag----actaaa-------g-------gatt-t--
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4837 44 +     28062 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40131 44 -     91139 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----aataaa-------g-------gat--t-t
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17657 44 +     95584 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17570 44 +    119600 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7071 46 +     18648 tt-ta------tgaat--gg----cttga-ttcttttt--cctgacag----actaaa-------g-------gatttt-t
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6746 45 -     13885 ct-ta------tgaat--gg----cttga-ttcttttt--cctgacag----actgaa-------g-------gatt-t-t
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15433 44 +     17162 tt-ta------tgaat--gg----cttga-ttcttttt--cctgacag----actaaa-------g-------gat--t-t
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450389 44 + 189096842 TT-TA------TGAAT--GG----CTTGA-T-----TCT-TTTTCCTGACAGACTAAA-------G-------GAT--T-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16682 44 -     18408 tt-ta------tgaat--gg----cttga-ttcttttt--cctgacag----actaaa-------g-------gat--t-t
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502078 42 +  60362399 c---gaa----agact--tgatc-ctttt-t---------cctga--------c---agactaaag-----gattt--t-t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5708 42 -     23171 c---gaa----agact--tgatc-ctttt-t---------cctga--------c---agactaaag-----gattt--t-t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219069 42 +   9314153 C---G----AAAGACT--TG-ATCCTTTT-T-----------------CCTGAC---Agactaaag-----gattt--t-t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41612194 42 +  59632846 c---gaa----agact--tgatc-ctttt-t---------cctga--------c---agactaaag-----gattt--t-t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45103764 42 -  63665305 C---G----AAAGACT--TG-ATCCTTTT-T-----------------CCTGAC---Agactaaag-----gattt--t-t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267432 43 +    496798 TT-CA------TAAGT--GA----TTGGA-G------TT-TTTTCCTGATAGACTAAA-------G-------AAG--T-T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               1003 40 +      5315 t---ga----gagact--tgatc-ctttt-t---------cctg---g-----c---agattaaag-------gat--g-t
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cebuella_niveiventris.k141_592277                           1967 45 -     12580 tt-ta------tgaat--gg----cttga-ttcttttt--cctgacag----actaaa-------g-------gatt-t-t
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39853 45 +     53515 tt-ta------tgaat--gg----cttga-ttcttttt--cctgacag----actaaa-------g-------gatt-t-t
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368049 44 -  26074798 at-ta------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4938 44 -     34880 at-ta------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64033 44 -     89041 at-ta------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            599 43 -      1636 tt-ca------taagt--ga----ttgga-gt-ttttt--cctgacag----actaaa-------g-------acg--t-t
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489053 42 -  27778364 t---ga----gtgact--tgatc-ctttt-t---------cctga--------c---aggctaaaa-----gattt--t-t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15886 42 +     27315 t---ga----gtgact--tgatc-ctttt-t---------cctga--------c---agactaaaa-----gattt--t-t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137562 25 -   4669795 TT-TA--------AGT--GG----CTCGA-T-----------------------TAAA-------G-------GAT--A-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41302 25 +     47900 ta-ta--------agt--gg----ctcga-t-----------------------TAAA-------G-------GAT--A-T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41134 25 -     44860 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41116 25 -    148725 tt-ta--------agt--gg----ctcga-t-----------------------TAAA-------G-------GAT--A-T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24178 25 -     40656 tt-ta--------agt--gg----ctcaa-t-----------------------taaa-------g-------gat--a-t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4113 25 +     20796 tt-ta--------agt--gg----ctcaa-t-----------------------taaa-------g-------gat--a-t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8368 25 -     17524 tt-ta--------agt--ga----ctcaa-t-----------------------taaa-------g-------gat--a-t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24057 25 -     34525 tt-ta--------agt--gg----cttaa-t-----------------------taaa-------g-------gat--a-t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8768 25 -     25376 tt-ta--------agt--gg----cttaa-t-----------------------taaa-------g-------gtt--a-t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361333 25 -  39242232 tt-ta--------agt--gg----ctcaa-t-----------------------taaa-------g-------gat--a-t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267078 25 +  21565898 tt-ta--------agt--gg----cttaa-t-----------------------TAAA-------G-------GAT--A-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28531 25 -     45857 tt-ta--------agt--gg----ctcaa-t-----------------------TAAA-------G-------GAT--A-T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24322 25 -     32606 tt-ta--------agt--gg----ctcaa-t-----------------------taaa-------g-------gat--a-t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          509 25 +      8499 tt-ta--------agt--gg----cttaa-t-----------------------taaa-------g-------gat--a-t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22021 25 +     70610 tt-ta--------agt--gg----ctcaa-t-----------------------taaa-------g-------gat--a-t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18886 25 +     36323 tt-ta--------agt--ga----ctcaa-t-----------------------taaa-------g-------gat--a-t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9832 37 -     19938 t---taa----tgagt--aa----tttgg-t-cttttcc-cctga--------c---t-------a-------aat--t-t
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             27484 44 -     33796 tt-tg------taagt--ga----cttga-tt-tttttt-cctgacag----actaaa-------g-------gatt-t--
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1671 44 -     15404 tt-tg------taagt--ga----cttga-ttcttttt--cctgacag----actaaa-------g-------gatt-t--
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5930 44 -     32913 gt-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16343 44 -     40346 gt-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16607 44 +    216457 gt-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16386 44 +     39636 gt-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            805 44 +      5346 tt-ca------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39477 44 -    112038 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5049 44 +     34062 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339782 25 +  18827391 tt-ta--------agt--gg----ctcaa-t-----------------------TAAA-------G-------GAT--A-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6393 25 -     44032 tt-ta--------agt--gg----ctcaa-t-----------------------taaa-------g-------gat--a-t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301108 25 - 135778131 tt-ta--------agT--GG----CTCAa-t-----------------------taaa-------g-------gat--a-t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405657 25 -   2368649 TC-TA--------AGT--GG----CTTGA-T-----------------------TAAA-------G-------ggt--a-t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374816 25 - 200372422 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------ggt--a-t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5541 25 -      6605 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------ggt--a-t
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35803955 41 +  53390261 T---G----AGTGACTCAGA---TCCTTT-T----------------CCTTGGT---A-------GGctaaggttt--c-t
i Condylura_cristata.JH655891.1                          C 0 I 287
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9367 40 +     10921 t---gaa----agact--tgctc-ctttt-t---------cctgacagact-aa---t-------g-------aat--t-g
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129               743 41 +     87169 t---aaa----acact--tcatc-ctttt-c---------cctga--------c---agactaaag-----gattt--t--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 3
s Dasypus_novemcinctus.JH564415.1                          2107149 37 -   2246927 t---taa----taagt--ta----CTTGG-T-CTTTTTC-CCtga--------c---t-------a-------aat--t-t
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Daubentonia_madagascariensis.ctg71                        289496 44 +  12879189 tt-ta------caagt--ga----cttga-ttcttttt--cctgaca--t--actaaa-------g-------gat--t-t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661339 41 -   1390856 t---ga----gtgact--tgatc-ctttt-t---------c-t--t-g----ac---agactaaaa-----gattt--t--
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136129 42 -    198055 t---ga----gtgact--tgatc-ctttt-t---------cctga--------c---agactaaaa-----gattt--t-t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Eidolon_helvum.AWHC01266696.1                               2726 40 +     19438 t---ga----gaggcg--tgatc-ctttt-t---------cctgacagact-ac---a-------g-------gat--t-c
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Enhydra_lutris.KZ291758.1                               24912812 42 +  41312741 t---gaa----agact--TG-ATCCTTTT-T-----------------GCTGAC---AGACTAAAGG-----Gttt--t-t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              3038298 42 -   4378816 t---ga----ctgact--tgatc-ctttt-g---------cctga--------c---aggccaaat-----gattt--t-t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21372232 42 +  39960074 t---ga----ctgact--tgatc-ctttt-g---------cctga--------c---aggccaaat-----gattt--t-t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409018 42 -    498745 t---ga----ctgact--tgatc-ctttt-g---------cctga--------c---aggccaaat-----gattt--t-t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               259340 25 +  21539334 tt-ta--------agt--gg----ctcaa-t-----------------------TAAA-------G-------GAT--A-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12460 44 -     24895 tt-t-------taagt--ga----cttga-ttcttttt--cctgaca----aactaaa-------g-------gatt-t-t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40172 44 -     70999 tt-t-------taagt--ga----cttga-ttcttttt--cctgaca----aactaaa-------g-------gatt-t-t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84132 44 +    112731 tt-t-------taagt--ga----cttga-ttcttttt--cctgaca----aactaaa-------g-------gaat-t-t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40704 44 +     68309 tt-t-------taagt--ga----cttga-ttcttttt--cctgaca----aactaaa-------g-------gatt-t-t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51029 44 -     65740 tt-t-------taagt--ga----cttga-ttcttttt--cctgaca----aactaaa-------g-------gatt-t-t
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21659 44 -     75513 tt-t-------taagt--ga----cttga-ttcttttt--cctgaca----aactaaa-------g-------gatt-t-t
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45852 44 -     97555 tt-t-------taagc--ga----tttga-ttcttttt--cctgaca----aactaaa-------g-------gatt-t-t
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2579 44 +     30972 tt-t-------taagt--ga----cttga-ttcttttt--cctgaca----aactaaa-------g-------gatt-t-t
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40302 44 -     52037 tt-t-------taagt--ga----cttga-ttcttttt--cctgaca----aactgaa-------g-------gatt-t-t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56703 44 -    111500 tt-t-------taagt--ga----cttga-ttcttttt--cctgaca----aactaaa-------g-------gatt-t-t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186243171 42 - 206538554 t---gaa----agact--tgatc-ttttt-t---------cctga--------c---agactaagg-----gattt--t-t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185112953 42 - 205367284 t---gaa----agact--tgatc-ttttt-t---------cctga--------c---agactaagg-----gattt--t-t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24301 42 -     30238 t---gaa----agact--tgatc-ttttt-tt--------c-tga--------c---agactaagg-----gattt--t-t
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     119817 44 -    137831 TT-TA------TGAGT--GA----CTTCATT------TT-TTTTCCCGATAGACTAAA-------G-------GAT--T-T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3357 44 +     22493 TT-TA------TGAGT--GA----CTTCATT------TT-TTTTCCTGATAGACTAAA-------G-------GAT--T-T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16826 16 +     32986 TT-TA------AGAGT--GA----CTTCA----------------------------------------------------
i Galagoides_demidoff.k141_561628                        C 0 I 28
s Galeopterus_variegatus.GalVar_scaffold_74466               15661 46 +     18121 tt-taaa----taagt--ga----ctgga-ttctttt-c-cctgacag----actgaa-------g-------gat--a-t
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1463 27 -      8343 tt-ta------agagt--gg----cttga-t-----------------------taaa-------g-------gat--c-t
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250963 27 - 186649187 tt-ta------agagt--gg----cttga-t-----------------------TAAA-------G-------GAT--C-T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12389 44 -     40692 tt-t-------taagt--ga----cttga-ttcttttt--cctgacag----actaaa-------g-------gatt-t-t
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33791 44 +     49394 tt-t-------taagt--ga----cttga-ttcttttt--cctgacag----actaaa-------g-------gatt-t-t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58659 44 -     66874 tt-t-------taagt--ga----cttga-ttcttttt--cctgacag----actaaa-------g-------gatt-t-t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7536 44 -     42923 tt-t-------taagt--ga----cttga-ttcttttt--cctgacag----actaaa-------g-------gatt-t-t
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14532 44 -     53142 tt-t-------taagt--ga----cttga-ttcttttt--cctgacag----actaaa-------g-------gatt-t-t
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27287 27 -    327341 t---gga----agact--tgatc-ctatt-c---------cctga--------c---a-----------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 11
s Hipposideros_armiger.JXIK01000431.1                      1546612 44 -   1711038 t---aaataagagatt--tgttc-ctttt-t---------cctgacagact-aa---a-------g-------gat--t-t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45928 44 +     49977 t---gaataagaaact--tgttc-ctttt-t---------cctgacagact-aa---a-------g-------gtt--t-t
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138857 27 -    630532 tt-ta------atagt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65736 41 +     83186 a---gaa----agact--tgatc-ctttt-c---------c-t--t-g----ac---agactaaag-----gattt--t--
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               1890 27 +     12352 tt-ta------atagt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9073 27 +     55766 tt-ta------atagt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048412 27 + 191637585 tt-ta------atagt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797744 27 +  11177569 tt-ta------atagt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     542 45 -      1527 tt-ta------taaat--ga----cttga-ttctttttt-c-tgacagg----ctaaa-------t-------gatt-t-t
i Indri_indri.k141_4600452                               C 0 I 21
s Lagothrix_lagothricha.k141_246028                          40192 44 +    110728 tt-tg------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757180 44 +  30322482 tt-t-------taagt--ga----cttga-tt-tttttt-cctgacag----actaaa-------g-------gatt-t-c
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         886 44 -     13097 tt-ta------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            837 44 +      5940 tt-ta------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         468 44 -      5717 tt-ta------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7095 44 -     11567 tt-ca------tgaat--ga----cttga-ttccttct--cctgacag----actaaa-------g-------gat--t-t
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8476 44 -     12945 tt-ca------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5837 45 +     29618 tt-ta------taagt--ga----cttga-tcctttttt-cctgacag----aataaa-------g-------gatt-t--
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5834 45 +     31569 tt-ta------taagt--ga----cttga-tcctttttt-cctgacag----aataaa-------g-------gatt-t--
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5847 45 +     24756 tt-ta------taagt--ga----cttga-tcctttttt-cctgacag----actaaa-------g-------gatt-t--
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5839 45 +     16388 tt-ta------taagt--ga----cttga-tcctttttt-cctgacag----aataaa-------g-------gatt-t--
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810168 43 -   3914936 t---gaa----agact--tgatc-ctttt-t---------cctga--------c---agactaaag-----gattt--ttt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               329517 25 -   1826925 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2827 46 +     19643 tt-ta------tgagt--ga----cttcatttttttttt-cctgatagg----cgaaa-------a-------gat--t-t
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036485 47 -   6120653 tt-ta------tgagt--ga----cttcatttttttttttcctgatagg----cgaaa-------a-------gat--t-t
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611349 42 +  59628241 c---gaa----agact--tgatc-ctttt-t---------cctga--------c---agactaaag-----gattt--t-t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              41799 25 -     61512 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369427 25 -  60120075 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21747 25 +     30207 tt-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18850 25 -     24934 tt-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21634 24 +     30527 tt--a--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32823 25 -     50087 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42561 25 +     51645 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411135 25 - 187317192 tt-ta--------agT--GG----CTTGa-t-----------------------taaa-------g-------gat--a-t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396018 25 +  25927173 tt-ta--------agT--GG----CTCGa-t-----------------------taaa-------g-------gat--a-t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45149 25 -     62418 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21837 25 +     24253 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41594 25 +     59329 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267426 25 +    668171 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18772 25 +     21031 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32505 25 +     33478 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318900 25 +  24302211 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353732 25 -    752769 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670388 42 -    737560 t---gga----gaact--tgatc-ctttt-t---------cctga--------c---agactacag-----gatgt--t-t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217682 42 +    317179 t---gga----gaact--tgatc-ctttt-t---------cctga--------c---agactacag-----gatgt--t-t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146852 40 +    207569 t---ga----gggact--taat-tctttt-tt--------c-tgacagact-aa---a-------g-------gat--t-t
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_19308             22683 42 -     74585 T---G----AAAGACT--TG-ATCCTTTT-T-----------------GCTGAC---AGACTAAAGG-----GCTT--T-T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mico_argentatus.k141_582562                                 6855 45 +     17804 tt-ta------tgaat--gg----cttga-ttcttttt--cctgacag----actaaa-------g-------gatt-t-t
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7628 45 -     12984 tt-ta------tgaat--gg----cttga-ttcttttt--cctgacag----actaaa-------g-------gatt-t-t
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15590 45 -     26561 tt-ta------tgaat--gg----cttga-ttcttttt--cctgacag----actaaa-------g-------gatt-t-t
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981449 44 +  93316391 tt-ta------taagT--GA----CTTGA-T-----TCT-TTTTCCTGACAGACtaaa-------g-------gatt-t--
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181085 40 +    200668 t---ga----gagact--tgatc-ctttt-c---------cctgat-----------agactaaag-------gat--t-t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         18893 25 -     27822 tt-ta--------agt--gg----ctcaa-t-----------------------taaa-------g-------gat--a-t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5178 42 +     27589 t---gaa----agact--tgatc-ctttt-t---------cctga--------c---agactaaag-----gattt--t-t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     49310 44 -     62432 tt-ta------taagt--ga----cttga-ttcttttt--cctgacag----actaaa-------g-------gatt-t--
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175271 40 +    366855 t---ga----cagact--tgatc-ctttt-t---------cct--ta--t-------agactaaag-------gat--t-t
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15025 27 -     63510 t---gaa----agact--tgatc-ctatt-c---------cctga--------c---a-----------------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 11
s Mustela_putorius.JH418006.1                             14351621 42 +  14710649 t---gaa----aGACT--TG-ATCCTTTT-T-----------------GAAGAC---AGACTAAAGG-----GAtt--a-t
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116599 41 +    130748 t---t--ta--aaagt--ga----ctagg-t-cttttt--cc--at-gactgtg---t-------a-------aat--a-t
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 1
s Nasalis_larvatus.k141_1350636                              25195 25 +     34575 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465563 42 -  31847680 t---gaa----agact--taatc-ctttt-t---------cctga--------c---agactaaag-----gattt--t-t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   123706 40 -    149072 t---ga----caaatt--tgatc-ctttt-t---------cct--ta--t-------agactaaag-------gat--t-t
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           50142 27 -    132029 tt-ta------atagt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6238 27 -     16345 tt-ta------atagt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12121 27 +     22201 tt-ta------atagt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410458 27 -  22158432 tt-ta------atagt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22521 27 -     54323 tt-ta------atagt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                194964 42 +   9404916 t---gaa----aGATT--TG-ATCCTTTT-T-----------------CCTGAC---Agactaaag-----gattt--t-t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93631601 46 + 196305487 tt-ta------tgagt--ga----cttcatttttttttt-cctgacagg----ctaaa-------g-------gat--t-t
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                              990 46 +      2758 tt-ta------tgagt--ga----cttcatttttttttt-cctgacagg----ctaaa-------g-------gat--t-t
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559868 18 - 199412804 tt-ta------tgagt--ga----cttcatt--------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 16
s Odobenus_rosmarus.KB229312.1                             1448347 42 +   2017862 t---gaa----agact--tgatc-ctttt-t---------cctga--------c---agactaaag-----gattt--c-t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36012 42 +    559221 t---gaa----agact--tgatc-ctttt-t---------cctga--------c---agactaaag-----gattt--t-t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_85057                         23092 46 -     23432 TT-TA------TGAGT--GA----CTTCATT----TTTT-TTTTCCCGATAGACTAAA-------G-------GAT--T-T
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347657 46 +   1103335 TT-TA------Tgagt--ga----cttcatttttttttt-cccaatag----aCTAAA-------g-------gat--t-t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.KZ622849.1                                 29430 27 -    110857 TT-TA------GGAGT--GG----CTTGA-T-----------------------TAAA-------G-------GAT--C-T
i Pan_troglodytes.KZ622849.1                             I 19 I 138
s Panthera_onca.PanOnc_flattened_line_3271                   20891 42 -    230217 t---gaa----agact--tgatc-ttttt-t---------cctga--------c---agactaagg-----gattt--t-t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18458217 42 -  18783137 t---gaa----agact--tgatc-ttttt-t---------cctga--------c---agactaagg-----gattt--t-t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3968942 42 +   8748460 t---gaa----agact--tcatc-ttttt-t---------cctga--------c---agactaagg-----gattt--t-t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   239744 25 - 183742232 tt-ta--------agt--GG----CTCGa-t-----------------------taaa-------g-------gat--a-t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6211 25 +     21308 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287248 25 -  20919399 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18864 25 -     27687 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12000 25 +     16796 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18810 25 -     23640 tt-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11805 43 +     78924 t---gaa----agact--tgatcgcgttt-t---------cct-a-a------c---aaactaaag---aa--ttt--t-t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21704 50 +     31479 tt-ta------tgagt--ga----cttcatttatttttt-cctgataggttggctaaa-------g-------gat--t-t
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14075 50 -     24908 tt-ta------tgagt--ga----cttcatttatttttt-cctgataggttggctaaa-------g-------gat--t-t
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5649 25 +      7560 tc-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61356 25 -     63152 tc-ta--------agt--gg----ctcga-t-----------------------TAAA-------G-------GAT--A-T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43955 25 +     45295 tc-ta--------agt--gg----ctcga-t-----------------------taaa-------g-------gat--a-t
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1634 25 +      5735 TC-TA--------AGT--GG----CTCGA-T-----------------------TAAA-------G-------GAT--A-T
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             61828 43 +    207309 ct-ta------t-agt--ga----cttga-ttccttt-c-cctgacag----actaaa-------g-------gat--t-t
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2948 43 -     25401 ct-ta------t-agt--ga----cttga-ttccttt-c-cctgacag----actaaa-------g-------gat--t-t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28663 43 +     58159 ct-ta------t-agt--ga----cttga-ttccttt-c-cctgacag----actaaa-------g-------gat--t-t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28939 43 +     63561 ct-ta------t-agt--ga----cttga-ttccttt-c-cctgacag----actaaa-------g-------gat--t-t
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28702 43 +     51148 ct-ta------t-agt--ga----cttga-ttccttt-c-cctgacag----actaaa-------g-------gat--t-t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553695 43 -   4542175 ct-ta------t-agt--ga----cttga-ttccttt-c-cctgacag----actaaa-------g-------gat--t-t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28686 43 +     51125 ct-ta------t-agt--ga----cttga-ttccttt-c-cctgacag----actaaa-------g-------gat--t-t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5104 44 +     39866 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           191 44 -      9282 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39592 44 -     87950 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     39985 44 -     88961 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4684 44 -     39403 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39638 44 +     87928 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4682 44 -     60166 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11618 44 -     67232 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39534 44 -     90634 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41002 44 +     89403 ct-ta------tgagt--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   173969 27 - 189387572 TT-TA------AGAGT--GG----CTTGA-T-----------------------TAAA-------G-------GAT--A-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188967 27 -   9816681 tt-ta------agagt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24132 25 +     69807 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41327 25 -     80239 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980336 44 +   4620579 tt-t-------taagt--ga----CTTGA-T-----TCT-TTTTCCTGACAGactaaa-------g-------gatt-t-t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562923 44 -   2598838 tt-ta------taaat--ga----cttga-ttctttttt-c-tga----cAGACtaaa-------g-------gatt-t--
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            565 44 -      7103 tt-ta------taaat--ga----cttga-ttctttttt-c-tgacag----actaaa-------g-------gatt-t--
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1165 44 -     11706 tt-ta------taaat--ga----cttga-ttctttttt-c-tgacag----actaaa-------g-------gatt-t--
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4900 44 -     30655 tt-ta------taaat--ga----cttga-ttctttttt-c-tgacag----actaaa-------g-------gatt-t--
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31225 44 +     46564 tt-ta------taaat--ga----cttga-ttctttttt-c-tgacag----actaaa-------g-------gatt-t--
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91516 45 -     98465 tt-ta------taaat--ga----cttga-ttctttttt-c-tgacag----actaaa-------g-------gatt-t-t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5134 44 +     35169 tt-ta------taaat--ga----cttga-ttctttttt-c-tgacag----actaaa-------g-------gatt-t--
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48330 40 -     66298 t---ga----gagact--tagtc-ctttt-t---------cctgat-----------agactaaat-------gat--t-t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1404 43 -     18639 T---G----AAAGACT--TG-ATCCTTTT-T-----------------GCTGAC---AGACTAAAGG-----GTTT-TT-T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5837308 40 -  28871421 t---ga----gagatg--tgatc-ctttt-c---------cctgacagact-ac---a-------g-------gat--t-c
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533869 40 -   4952924 t---ga----gagatg--tgatc-ctttt-c---------cctgacagact-ac---a-------g-------gaa--t-c
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095768 42 +  38429054 t---gaa----aggct--tgatc-ttttt-t---------cctga--------c---agactaagg-----gattt--t-t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23520 25 +     91421 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150012 25 -   7812017 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4389 25 +     72585 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909946 43 +   3329780 t---gaataag-tact--tgttc-ctttt-t-ctt--------gacagact-aa---g-------g-------gat--t-t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            25353 25 +     27361 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118703 25 + 195417433 TC-TA--------AGT--GG----CTTGa-t-----------------------taaa-------g-------gat--a-t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232961 25 -   7961872 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71331 40 -    116970 g---ga----gaagcg--tgatc-ctttt-t---------cctgacagactg-c---a-------g-------gat--t-c
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                803 44 +     27962 tt-ca------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              816 44 +      6077 tt-ca------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              830 44 +      5971 tt-ca------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                885 44 +      5932 tt-ca------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1031 44 -      2099 tt-ca------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388062 44 - 209938924 tt-ca------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 832 44 +      5979 tt-ca------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1215 44 -      4301 tt-ca------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235272 44 +   5703754 at-ta------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4862 44 +     21866 at-ta------tgaat--ga----cttga-ttcctttt--cctgacag----actaaa-------g-------gat--t-t
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113004 41 +    313613 t---ga----gtgactcaga-t--cattt-tt--------cctgat-----------a-------gactaaagttt--t-t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21841 25 +     27374 tc-ta--------agt--gg----cttaa-t-----------------------taaa-------g-------gat--a-t
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25358 25 +     58920 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11853 25 -     45317 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19510 25 -     42441 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22192 25 -     29113 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25264 25 -     48123 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855717 30 -   1910179 T---T----AATGAAT--GA----CCTAA-T-----------------TCTGAT---T-------T-------GAT--T-T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3407 43 -     97271 t---gaa----agact--tgatc-ctttt-t-------g-c-tga--------c---agactaaag-----gatttt-t-t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121422 27 +    196729 t---gga----agact--tgatc-ctatt-c---------cctga--------c---a-----------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 27
s Symphalangus_syndactylus.tarseq_199                       387439 27 +   1523678 tt-ta------atagt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Symphalangus_syndactylus.tarseq_199                    C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_445853                1470 38 -      2009 ----t--ta--aaagt--ga----ctagg-t-cttttt--c-t-at-gactgtc---t-------g---------t--t-t
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_7432                      188070 42 +    199430 t---aa----ctgact--tgatc-cttct-t---------c-t--t-g----ac---aggctaaag-----gattt--t-t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102025 42 -    539355 t---ga----ctgact--tgatc-ctttt-t---------c-t--t-g----ac---aggctaaag-----gattt--t-t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4123 43 +      6850 tt-ca------taagt--ga----ttgga-tt-ttttt--cctgacag----actaaa-------g-------aag--t-t
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4162 43 +     20590 tt-ca------taagt--ga----ttggg-tt-ttttt--cctgacag----actgaa-------g-------aag--t-t
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349729 25 - 186847797 tt-ta--------agt--GG----CTCGa-t-----------------------taaa-------g-------gat--a-t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16814 37 -     31044 t---t--ta--tgagt--aa----cttgg-t-ctttct--cct--t-g----ac---t-------a-------aat--t-t
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476145 40 -    610378 t---ga----gagact--tgatc-ctatt-t---------cctgat-----------aggctaaag-------gag--t-t
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        17405 25 +     26378 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30086 25 -     78344 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16726 25 +     25722 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24949 25 -     62838 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25066 25 +     46913 tc-ta--------agt--gg----cttgg-t-----------------------taaa-------g-------gat--a-t
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5876 25 -     28527 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26888 25 -     64340 tc-ta--------agt--gg----cttga-t-----------------------TAAA-------G-------GAT--A-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24925 25 -     63452 tc-ta--------agt--gg----cttga-t-----------------------TAAA-------G-------GAT--A-T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6367 25 +     22490 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         3978 25 +      4141 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6793 25 -     13050 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252028 25 -   6242583 tc-ta--------agt--gg----cttga-t-----------------------taaa-------g-------gat--a-t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57760 25 +     59866 tc-ta--------agt--gg----cttgg-t-----------------------taaa-------g-------gat--a-t
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830006 46 -   4065304 TT-TT----TATAAGT--GA----CTTGA-T-----TCT-CTTTCTTGACAAactaaa-------g-------aat--t-t
i Tupaia_chinensis.KB320699.1                            I 274 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4557 47 -     70247 TTTTT----TATAAGT--GA----CTTGA-T-----TCT-CTTTCTTGACAATCGAAA-------G-------AAT--T-T
i Tupaia_tana.TupTan_flattened_line_394                  I 282 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104228 41 -    105689 t---ga----gtgactagga-t--catat-ttctt--------gat-----------a-------tactaagaggt--t-t
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178298 41 +   5085361 t---gaa----agact--caatc-ctt-t-t-------g-c-tga--------c---agactaaag-----gattt--t-t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  21976 45 -     30710 tt-ta------taaat--ga----cgtga-ttcttttt--cctgacag----actaaa-------g-------gatt-t-t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20883 45 -    147434 tt-ta------taaat--ga----cttga-ttcttttt--cctgacag----actaaa-------g-------gatt-t-t
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101730 42 -    112863 t---gaa----agact--tgatc-ctttt-t---------cctga--------c---agactaaag-----gattt--t-t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25567 42 -     86975 t---gaa----agact--tgatc-ctttt-t---------cctga--------c---agactaaag-----gattt--c-t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pipistrellus_pipistrellus.PipPip_scaffold_20257            46432  3 +     46691 I
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        2568  3 +      3929 I
e Myotis_lucifugus.GL429869.1                               378847  4 +   4330536 I
e Myotis_davidii.KB100139.1                                4379029  4 +   6019432 I
e Myotis_brandtii.KE162005.1                               9788617  4 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          34166  3 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                219726 71 -    270270 I
e Loxodonta_africana.GL010049.1                           39077361 28 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12574263  3 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1136 4 +     36723 T-T-T-C
s Acinonyx_jubatus.LLWD01001279.1                           809556 2 +   1699592 t-t----
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 6
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411684 2 +  29979442 t-t----
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 5
s Allenopithecus_nigroviridis.k141_3755588                   44429 4 +     53615 t-t-t-c
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40244 4 +     44087 t-t-t-c
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         12948 4 -     21945 T-T-T-C
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14626 4 +     32033 T-T-T-C
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69191 4 -     84148 t-t-t-c
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41414 4 -     78289 t-t-t-c
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40862 4 +     55831 t-t-t-c
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39303 4 -     64179 t-t-t-c
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20946 4 -     24835 t-t-t-c
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37929 4 +     45454 t-t-t-c
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43628 4 +     70886 t-t-t-c
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5755 4 +     30854 t-t-t-c
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29894 4 +     42133 t-t-t-c
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173155 2 -    412891 t-t----
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 9
s Aotus_azarae.k141_118258                                   47703 4 -     65372 t-t-t-c
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41448 5 +     43593 t-ttt-c
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669461 4 +   5030052 t-t-t-c
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21103 4 -     23494 t-t-t-c
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6239 4 +      8415 t-t-t-c
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16312 2 -     45910 t-t----
i Arctocebus_calabarensis.k141_1364444                   C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   983 2 -     15198 t-t----
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 9
s Ateles_geoffroyi_b.tarseq_1536                               271689 4 +  21539123 t-t-t-c
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7860 4 +     48076 t-t-t-c
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2994 4 -     28759 t-t-t-c
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30546 4 +     44353 t-t-t-c
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45921 4 -     71267 t-t-t-c
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19977 4 -     33135 t-t-t-c
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3098 4 +     11645 t-t-t-c
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3100 4 -     19611 t-t-t-c
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4881 4 +     28062 t-t-t-c
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40175 4 -     91139 t-t-t-c
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17701 4 +     95584 t-t-t-c
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17614 4 +    119600 t-t-t-c
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7117 1 +     18648 t------
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6791 4 -     13885 t-t-t-c
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15477 1 +     17162 t------
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450433 1 + 189096842 T------
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16726 1 -     18408 t------
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502120 2 +  60362399 t-t----
i CanFam4.chr16                                          C 0 I 5
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5750 2 -     23171 t-t----
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 5
s Canis_lupus_dingo.QKWQ01000480.1                          219111 2 +   9314153 t-t----
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 5
s Canis_lupus_familiaris.chr16                            41612236 2 +  59632846 t-t----
i Canis_lupus_familiaris.chr16                           C 0 I 5
s Canis_lupus_orion.HG994398.1                            45103806 2 -  63665305 t-t----
i Canis_lupus_orion.HG994398.1                           C 0 I 5
s Carlito_syrichta.NW_007259797.1                           267475 4 +    496798 T-T-T-C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               1043 2 +      5315 t-t----
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 8
s Cebuella_niveiventris.k141_592277                           2012 1 -     12580 t------
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39898 1 +     53515 t------
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368093 4 -  26074798 t-t-t-c
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4982 4 -     34880 t-t-t-c
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64077 4 -     89041 t-t-t-c
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            642 4 -      1636 t-t-t-c
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489095 2 -  27778364 t-t----
i Ceratotherium_simum.JH767749.1                         C 0 I 7
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15928 2 +     27315 t-t----
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 7
s Cercocebus_atys.KQ010504.1                                137587 4 -   4669795 T-T-T-C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41327 4 +     47900 T-T-T-C
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41159 4 -     44860 t-t-t-c
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41141 4 -    148725 T-T-T-C
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24203 4 -     40656 t-t-t-c
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4138 4 +     20796 t-t-t-c
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8393 4 -     17524 t-t-t-c
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24082 4 -     34525 t-t-t-c
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8793 4 -     25376 t-t-t-c
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361358 4 -  39242232 t-t-t-c
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267103 4 +  21565898 T-T-T-C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28556 4 -     45857 T-T-T-C
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24347 4 -     32606 t-t-t-c
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          534 4 +      8499 t-t-t-c
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22046 4 +     70610 t-t-t-c
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18911 4 +     36323 t-t-t-c
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9869 1 -     19938 t------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 5
s Cheirogaleus_major.k141_666340                             27528 4 -     33796 t-t-t-c
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1715 4 -     15404 t-t-t-c
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             5974 4 -     32913 t-t-t-c
i Cheracebus_lucifer.k141_2312002                        C 0 I 1
s Cheracebus_lugens.k141_1179667                             16387 4 -     40346 t-t-t-c
i Cheracebus_lugens.k141_1179667                         C 0 I 1
s Cheracebus_regulus.k141_471822                             16651 4 +    216457 t-t-t-c
i Cheracebus_regulus.k141_471822                         C 0 I 1
s Cheracebus_torquatus.k141_890198                           16430 4 +     39636 t-t-t-c
i Cheracebus_torquatus.k141_890198                       C 0 I 1
s Chiropotes_albinasus.k141_1946120                            849 4 +      5346 t-t-t-c
i Chiropotes_albinasus.k141_1946120                      C 0 I 1
s Chiropotes_israelita.k141_313004                           39521 4 -    112038 t-t-t-c
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5093 4 +     34062 t-t-t-c
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339807 4 +  18827391 T-T-T-C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6418 4 -     44032 t-t-t-c
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301133 4 - 135778131 t-t-t-c
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405682 4 -   2368649 t-t-t-c
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374841 4 - 200372422 t-t-t-c
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5566 4 -      6605 t-t-t-c
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804283 2 +  53390261 t-T----
i Condylura_cristata.JH655891.1                          I 287 I 10
s Cryptoprocta_ferox.CryFer_flattened_line_16129               787 2 +     87169 t-t----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 I 6
s Dasypus_novemcinctus.JH564415.1                          2107187 1 -   2246927 t------
i Dasypus_novemcinctus.JH564415.1                        I 1 I 5
s Daubentonia_madagascariensis.ctg71                        289540 4 +  12879189 t-t-t-c
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661380 1 -   1390856 --t----
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 7
s Diceros_bicornis.DicBicMic_scaffold_5955                  136172 2 -    198055 t-t----
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 I 7
s Eidolon_helvum.AWHC01266696.1                               2766 2 +     19438 t-t----
i Eidolon_helvum.AWHC01266696.1                          C 0 I 8
s Enhydra_lutris.KZ291758.1                               24912854 2 +  41312741 t-t----
i Enhydra_lutris.KZ291758.1                              C 0 I 5
s Equus_asinus.JREZ01000139.1                              3038340 2 -   4378816 t-c----
i Equus_asinus.JREZ01000139.1                            C 0 I 7
s Equus_caballus.CM000403.2                               21372274 2 +  39960074 t-c----
i Equus_caballus.CM000403.2                              C 0 I 7
s Equus_przewalskii.KK951119.1                              409060 2 -    498745 t-c----
i Equus_przewalskii.KK951119.1                           C 0 I 7
s Erythrocebus_patas.Contig38                               259365 4 +  21539334 T-T-T-C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12504 4 -     24895 t-t-t-c
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40216 4 -     70999 t-t-t-c
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84176 4 +    112731 t-t-t-c
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40748 4 +     68309 t-t-t-c
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51073 4 -     65740 t-t-t-c
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21703 4 -     75513 t-t-t-c
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45896 4 -     97555 t-t-t-c
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2623 4 +     30972 t-t-t-c
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40346 4 -     52037 t-t-t-c
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56747 4 -    111500 t-t-t-c
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186243213 2 - 206538554 t-t----
i Felis_catus.CM001381.2                                 C 0 I 6
s Felis_catus_fca126.CM031415.1                          185112995 2 - 205367284 t-t----
i Felis_catus_fca126.CM031415.1                          C 0 I 6
s Felis_nigripes.FelNig_flattened_line_31944                 24343 2 -     30238 t-t----
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 6
s Galago_moholi.ctg3793                                     119861 4 -    137831 C-T-T-C
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3401 4 +     22493 C-T-T-C
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16870 4 +     32986 C-T-T-C
i Galagoides_demidoff.k141_561628                        I 28 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15707 4 +     18121 t-t-t-a
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 62
s Gorilla_beringei.k141_3358147                               1490 4 -      8343 t-t-t-c
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250990 4 - 186649187 T-T-T-C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12433 4 -     40692 t-t-t-c
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33835 4 +     49394 t-t-t-c
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58703 4 -     66874 t-t-t-c
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7580 4 -     42923 t-t-t-c
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14576 4 -     53142 t-t-t-c
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27325 1 -    327341 --t----
i Helogale_parvula.HelPar_flattened_line_2585            I 11 I 16
s Hipposideros_armiger.JXIK01000431.1                      1546656 2 -   1711038 t-t----
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 11
s Hipposideros_galeritus.HipGal_scaffold_23202               45972 2 +     49977 t-t----
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 14
s Hoolock_leuconedys.ctg274                                    138884 4 -    630532 t-t-t-c
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65777 2 +     83186 t-t----
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 6
s Hylobates_agilis.k141_1155965                               1917 4 +     12352 t-t-t-c
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9100 4 +     55766 t-t-t-c
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048439 4 + 191637585 t-t-t-c
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797771 4 +  11177569 t-t-t-c
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_1634743                                     854 4 -      1784 t-t-t-c
i Indri_indri.k141_1634743                               I 138 C 0
s Lagothrix_lagothricha.k141_246028                          40236 4 +    110728 t-t-t-c
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757224 4 +  30322482 t-t-t-c
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         930 4 -     13097 t-t-t-c
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            881 4 +      5940 t-t-t-c
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         512 4 -      5717 t-t-t-c
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7139 4 -     11567 t-t-t-c
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8520 4 -     12945 t-t-t-c
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5882 4 +     29618 t-t-t-c
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5879 4 +     31569 t-t-t-c
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5892 4 +     24756 t-t-t-c
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5884 4 +     16388 t-t-t-c
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810211 2 -   3914936 t-t----
i Leptonychotes_weddellii.KB714746.1                     C 0 I 5
s Lophocebus_aterrimus.ctg367                               329542 4 -   1826925 t-t-t-c
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2873 2 +     19643 t-t----
i Loris_lydekkerianus.k141_2031736                       C 0 I 1
s Loris_tardigradus.ctg83                                  5036532 2 -   6120653 t-t----
i Loris_tardigradus.ctg83                                C 0 I 1
s Loxodonta_africana.GL010049.1                           39077389 1 +  43346337 t------
i Loxodonta_africana.GL010049.1                          I 28 I 4
s Lycaon_pictus.CM007581.1                                41611391 2 +  59628241 t-t----
i Lycaon_pictus.CM007581.1                               C 0 I 5
s Macaca_arctoides.k141_1757516                              41824 4 -     61512 t-t-t-c
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369452 4 -  60120075 t-t-t-c
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21772 4 +     30207 t-t-t-c
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18875 4 -     24934 t-t-t-c
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21658 4 +     30527 t-t-t-c
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32848 4 -     50087 t-t-t-c
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42586 4 +     51645 t-t-t-c
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411160 4 - 187317192 t-t-t-c
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396043 4 +  25927173 t-t-t-c
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45174 4 -     62418 t-t-t-c
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21862 4 +     24253 t-t-t-c
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41619 4 +     59329 t-t-t-c
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267451 4 +    668171 t-t-t-c
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18797 4 +     21031 t-t-t-c
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32530 4 +     33478 t-t-t-c
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318925 4 +  24302211 t-t-t-c
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353757 4 -    752769 t-t-t-c
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670430 2 -    737560 t-c----
i Manis_javanica.JSZB01003497.1                          C 0 I 7
s Manis_pentadactyla.KN006162.1                             217724 2 +    317179 t-c----
i Manis_pentadactyla.KN006162.1                          C 0 I 7
s Mellivora_capensis.MelCap_flattened_line_19308             22725 2 -     74585 T-T----
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 5
s Mico_argentatus.k141_582562                                 6900 1 +     17804 t------
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7673 1 -     12984 t------
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15635 1 -     26561 t------
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981493 4 +  93316391 t-t-t-c
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181125 2 +    200668 t-t----
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 9
s Miopithecus_ogouensis.k141_1534655                         18918 4 -     27822 t-t-t-c
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5220 2 +     27589 t-t----
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 5
s Mirza_zaza.k141_766280                                     49354 4 -     62432 t-t-t-c
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175311 2 +    366855 t-c----
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 9
s Mungos_mungo.MunMun_flattened_line_18455                   15063 1 -     63510 --t----
i Mungos_mungo.MunMun_flattened_line_18455               I 11 I 17
s Mustela_putorius.JH418006.1                             14351664 1 +  14710649 --t----
i Mustela_putorius.JH418006.1                            I 1 I 5
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116641 1 +    130748 t------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 1 I 5
s Nasalis_larvatus.k141_1350636                              25220 4 +     34575 t-t-t-c
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465605 2 -  31847680 t-t----
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 5
s Noctilio_leporinus.NocLep_scaffold_7894                   123746 2 -    149072 t-t----
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 239
s Nomascus_annamensis.k141_1771965                           50169 4 -    132029 t-t-t-c
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6265 4 -     16345 t-t-t-c
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12148 4 +     22201 t-t-t-c
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410485 4 -  22158432 t-t-t-c
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22548 4 -     54323 t-t-t-c
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Otolemur_crassicaudatus.k141_85057                         23138 1 -     23432 ------C
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347703 1 +   1103335 ------c
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195006 2 +   9404916 t-t----
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 5
s Nycticebus_bengalensis.LG01                             93631647 2 + 196305487 t-t----
i Nycticebus_bengalensis.LG01                            C 0 I 2
s Nycticebus_coucang.k141_8166032                             1036 2 +      2758 t-t----
i Nycticebus_coucang.k141_8166032                        C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559902 2 - 199412804 t-t----
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 16 I 1
s Odobenus_rosmarus.KB229312.1                             1448389 2 +   2017862 t-t----
i Odobenus_rosmarus.KB229312.1                           C 0 I 5
s Otocyon_megalotis.JAEUCK010005147.1                        36054 2 +    559221 t-t----
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 5
s Pan_troglodytes.CM009242.2                               1468379 4 - 189151597 T-T-T-C
i Pan_troglodytes.CM009242.2                             I 31 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20933 2 -    230217 t-t----
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 6
s Panthera_pardus.KV860321.1                              18458259 2 -  18783137 t-t----
i Panthera_pardus.KV860321.1                             C 0 I 6
s Panthera_tigris.KE722367.1                               3968984 2 +   8748460 t-t----
i Panthera_tigris.KE722367.1                             C 0 I 6
s Papio_anubis.CM001495.2                                   239769 4 - 183742232 t-t-t-c
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6236 4 +     21308 t-t-t-c
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287273 4 -  20919399 t-t-t-c
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18889 4 -     27687 t-t-t-c
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12025 4 +     16796 t-t-t-c
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18835 4 -     23640 t-t-t-c
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11848 2 +     78924 t-t----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 6
s Perodicticus_ibeanus.k141_1921260                          21754 2 +     31479 t-t----
i Perodicticus_ibeanus.k141_1921260                      C 0 I 2
s Perodicticus_potto.k141_1854441                            14125 2 -     24908 t-t----
i Perodicticus_potto.k141_1854441                        C 0 I 2
s Piliocolobus_badius.k141_2495623                            5674 4 +      7560 t-t-t-c
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61381 4 -     63152 T-T-T-C
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43980 4 +     45295 t-t-t-c
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1659 4 +      5735 T-T-T-C
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             61871 4 +    207309 t-t-t-c
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2991 4 -     25401 t-t-t-c
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28706 4 +     58159 t-t-t-c
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28982 4 +     63561 t-t-t-c
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28745 4 +     51148 t-t-t-c
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553738 4 -   4542175 t-t-t-c
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28729 4 +     51125 t-t-t-c
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5148 4 +     39866 t-t-t-c
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 1
s Plecturocebus_brunneus.k141_862875                           235 4 -      9282 t-t-t-c
i Plecturocebus_brunneus.k141_862875                     C 0 I 1
s Plecturocebus_caligatus.k141_1382851                       39636 4 -     87950 t-t-t-c
i Plecturocebus_caligatus.k141_1382851                   C 0 I 1
s Plecturocebus_cinerascens.k141_1164729                     40029 4 -     88961 t-t-t-c
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 1
s Plecturocebus_cupreus.k141_2351393                          4728 4 -     39403 t-t-t-c
i Plecturocebus_cupreus.k141_2351393                     C 0 I 1
s Plecturocebus_dubius.k141_1058799                          39682 4 +     87928 t-t-t-c
i Plecturocebus_dubius.k141_1058799                      C 0 I 1
s Plecturocebus_grovesi.k141_2013005                          4726 4 -     60166 t-t-t-c
i Plecturocebus_grovesi.k141_2013005                     C 0 I 1
s Plecturocebus_hoffmannsi.k141_3303950                      11662 4 -     67232 t-t-t-c
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 1
s Plecturocebus_miltoni.k141_349282                          39578 4 -     90634 t-t-t-c
i Plecturocebus_miltoni.k141_349282                      C 0 I 1
s Plecturocebus_moloch.k141_1031110                          41046 4 +     89403 t-t-t-c
i Plecturocebus_moloch.k141_1031110                      C 0 I 1
s Pongo_abelii.CM009266.2                                   173996 4 - 189387572 T-T-T-C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188994 4 -   9816681 t-t-t-c
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24157 4 +     69807 t-t-t-c
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41352 4 -     80239 t-t-t-c
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980380 4 +   4620579 t-t-t-c
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562967 4 -   2598838 t-t-t-c
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            609 4 -      7103 t-t-t-c
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1209 4 -     11706 t-t-t-c
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            4944 4 -     30655 t-t-t-c
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31269 4 +     46564 t-t-t-c
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91561 2 -     98465 t-t----
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5178 4 +     35169 t-t-t-c
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48370 2 -     66298 t-t----
i Pteronotus_parnellii.KE847780.1                        C 0 I 9
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1447 2 -     18639 T-T----
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 5
s Pteropus_alecto.KB030862.1                               5837348 2 -  28871421 t-t----
i Pteropus_alecto.KB030862.1                             C 0 I 8
s Pteropus_vampyrus.KN525825.1                             3533909 2 -   4952924 t-t----
i Pteropus_vampyrus.KN525825.1                           C 0 I 8
s Puma_concolor.QAVW01001104.1                            18095810 2 +  38429054 t-t----
i Puma_concolor.QAVW01001104.1                           C 0 I 6
s Pygathrix_cinerea.k141_1153803                             23545 4 +     91421 t-t-t-c
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150037 4 -   7812017 t-t-t-c
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4414 4 +     72585 t-t-t-c
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2909989 2 +   3329780 t-t----
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 13
s Rhinopithecus_bieti.k119_221883                            25378 4 +     27361 t-t-t-c
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118728 4 + 195417433 t-t-t-c
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232986 4 -   7961872 t-t-t-c
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71371 2 -    116970 t-t----
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 8
s Saguinus_bicolor.k141_1429097                                847 5 +     27962 t-t-tcc
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              860 5 +      6077 t-t-ttc
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              874 4 +      5971 t-t-t-c
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                929 4 +      5932 t-t-t-c
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1075 4 -      2099 t-t-t-c
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388106 5 - 209938924 t-t-ttc
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 876 4 +      5979 t-t-t-c
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1259 5 -      4301 t-t-ttc
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235316 4 +   5703754 t-t-t-c
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4906 4 +     21866 t-t-t-c
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113045 2 +    313613 t-t----
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 10
s Semnopithecus_entellus.k141_158471                         21866 4 +     27374 t-t-t-c
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25383 4 +     58920 t-t-t-c
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11878 4 -     45317 t-t-t-c
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19535 4 -     42441 t-t-t-c
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22217 4 -     29113 t-t-t-c
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25289 4 -     48123 t-t-t-c
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855747 2 -   1910179 T-T----
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 6
s Spilogale_gracilis.SpiGra_flattened_line_13525              3450 2 -     97271 t-t----
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 5
s Suricata_suricatta.SurSur_flattened_line_6629             121476 1 +    196729 --t----
i Suricata_suricatta.SurSur_flattened_line_6629          I 27 I 12
s Symphalangus_syndactylus.tarseq_199                       387467 3 +   1523678 --t-t-c
i Symphalangus_syndactylus.tarseq_199                    I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1509 1 -      2009 t------
i Tamandua_tetradactyla.TamTet_scaffold_445853           I 1 I 5
s Tapirus_indicus.TapInd_scaffold_7432                      188112 3 +    199430 ttc----
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 7
s Tapirus_terrestris.TapTer_scaffold_755                    102067 3 -    539355 ttc----
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 7
s Tarsius_lariang.k141_1780720                                4166 4 +      6850 t-t-t-c
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4205 4 +     20590 t-t-t-c
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349754 4 - 186847797 t-t-t-c
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16851 1 -     31044 t------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 5
s Tonatia_saurophila.TonSau_scaffold_294                    476185 2 -    610378 t-t----
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 9
s Trachypithecus_auratus.k141_1189070                        17430 4 +     26378 t-t-t-c
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30111 4 -     78344 t-t-t-c
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16751 4 +     25722 t-t-t-c
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24974 4 -     62838 t-t-t-c
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25091 4 +     46913 t-t-t-c
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5901 4 -     28527 t-t-t-c
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26913 4 -     64340 T-T-T-C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24950 4 -     63452 T-T-T-C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6392 4 +     22490 t-t-t-c
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         4003 4 +      4141 t-t-t-c
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6818 4 -     13050 t-t-t-c
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252053 4 -   6242583 t-t-t-c
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57785 4 +     59866 t-t-t-c
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830052 2 -   4065304 t-t----
i Tupaia_chinensis.KB320699.1                            C 0 I 6
s Tupaia_tana.TupTan_flattened_line_394                       4604 2 -     70247 T-T----
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 6
s Uropsilus_gracilis.UroGra_scaffold_7153                   104269 2 -    105689 t-t----
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 10
s Ursus_maritimus.KK499267.1                                178339 2 +   5085361 t-t----
i Ursus_maritimus.KK499267.1                             C 0 I 5
s Varecia_rubra.k141_787544                                  22021 4 -     30710 t-t-t-c
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              20928 4 -    147434 t-t-t-c
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101772 2 -    112863 t-t----
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 5
s Zalophus_californianus.ZalCal_flattened_line_17732         25609 2 -     86975 t-t----
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 5
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Pipistrellus_pipistrellus.PipPip_scaffold_20257            46432 3 +     46691 I
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        2568 3 +      3929 I
e Myotis_lucifugus.GL429869.1                               378847 4 +   4330536 I
e Myotis_davidii.KB100139.1                                4379029 4 +   6019432 I
e Myotis_brandtii.KE162005.1                               9788617 4 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          34166 3 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       146892 1 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                219726 71 -    270270 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12574263 3 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_101005          9407 1 +     10921 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1140  7 +     36723 CT-----TAATG
s Acinonyx_jubatus.LLWD01001279.1                           809564  2 +   1699592 gg----------
i Acinonyx_jubatus.LLWD01001279.1                        I 6 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411691  2 +  29979442 ga----------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 5 I 1
s Allenopithecus_nigroviridis.k141_3755588                   44433  7 +     53615 tt-----taatg
i Allenopithecus_nigroviridis.k141_3755588               C 0 I 21
s Allochrocebus_lhoesti.k141_441277                          40248  7 +     44087 tt-----taatg
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         12952  7 -     21945 TT-----TAATG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14630  7 +     32033 TT-----TAATG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69195  7 -     84148 tt-----taata
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41418  7 -     78289 tt-----taata
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40866  7 +     55831 tt-----taata
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39307  7 -     64179 tt-----taata
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20950  7 -     24835 tt-----taata
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37933  7 +     45454 tt-----taata
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43632  7 +     70886 tt-----taata
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5759  7 +     30854 tt-----taata
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29898  7 +     42133 tt-----taata
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173166  2 -    412891 tt----------
i Anoura_caudifer.AnoCau_scaffold_1412                   I 9 I 1
s Aotus_azarae.k141_118258                                   47707  7 -     65372 tt-----taata
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41453  7 +     43593 tt-----taata
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669465  7 +   5030052 tt-----taata
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21107  7 -     23494 tt-----taata
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6243  7 +      8415 tt-----taata
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16316  3 -     45910 tt-----t----
i Arctocebus_calabarensis.k141_1364444                   I 2 I 15
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   994  2 -     15198 tt----------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 9 I 1
s Ateles_geoffroyi_b.tarseq_1536                               271693  7 +  21539123 tt-----taata
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7864  7 +     48076 tt-----taata
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   2998  7 -     28759 tt-----taata
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30550  7 +     44353 tt-----taata
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45925  7 -     71267 tt-----taata
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19981  7 -     33135 tt-----taata
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3102  7 +     11645 tt-----ttctg
i Avahi_laniger.k141_2756659                             C 0 I 8
s Avahi_peyrierasi.k141_1823318                               3104  7 -     19611 tt-----ttctg
i Avahi_peyrierasi.k141_1823318                          C 0 I 8
s Cacajao_ayresi.k141_96119                                   4885  7 +     28062 tt-----taata
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40179  7 -     91139 tt-----taata
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17705  7 +     95584 tt-----taata
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17618  7 +    119600 tt-----taata
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              6795  7 -     13885 tt-----taata
i Callimico_goeldii.k141_1609886                         C 0 C 0
s CanFam4.chr16                                           42502127  2 +  60362399 ag----------
i CanFam4.chr16                                          I 5 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5757  2 -     23171 ag----------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 5 I 1
s Canis_lupus_dingo.QKWQ01000480.1                          219118  2 +   9314153 ag----------
i Canis_lupus_dingo.QKWQ01000480.1                       I 5 I 1
s Canis_lupus_familiaris.chr16                            41612243  2 +  59632846 ag----------
i Canis_lupus_familiaris.chr16                           I 5 I 1
s Canis_lupus_orion.HG994398.1                            45103813  2 -  63665305 aG----------
i Canis_lupus_orion.HG994398.1                           I 5 I 1
s Carlito_syrichta.NW_007259797.1                           267479 12 +    496798 TTCCCTTTAATG
i Carlito_syrichta.NW_007259797.1                        C 0 I 4
s Carollia_perspicillata.CarPer_scaffold_170178               1053  2 +      5315 tt----------
i Carollia_perspicillata.CarPer_scaffold_170178          I 8 I 1
s Cebus_albifrons.Contig27                                  368097  7 -  26074798 tt-----tgata
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                4986  7 -     34880 tt-----tgata
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64081  7 -     89041 tt-----tgata
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            646 12 -      1636 ttccctttaatg
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489104  2 -  27778364 tt----------
i Ceratotherium_simum.JH767749.1                         I 7 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15937  2 +     27315 tt----------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 7 I 1
s Cercocebus_atys.KQ010504.1                                137591  7 -   4669795 TT-----caatg
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41331  7 +     47900 TT-----CAATG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41163  7 -     44860 tt-----caatg
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41145  7 -    148725 TT-----CAATG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24207  7 -     40656 tt-----taatg
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4142  7 +     20796 tt-----taatg
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8397  7 -     17524 tt-----taatg
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24086  7 -     34525 tt-----taatg
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8797  7 -     25376 tt-----taatg
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361362  7 -  39242232 tt-----taatg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267107  7 +  21565898 TT-----TAATG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28560  7 -     45857 TT-----TAATG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24351  7 -     32606 tt-----taatg
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          538  7 +      8499 tt-----taatg
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22050  7 +     70610 tt-----taatg
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18915  7 +     36323 tt-----taatg
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9875  2 -     19938 tt----------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 5 I 1
s Cheirogaleus_major.k141_666340                             27532  7 -     33796 tt-----ttctg
i Cheirogaleus_major.k141_666340                         C 0 I 4
s Cheirogaleus_medius.k141_759766                             1719  7 -     15404 tt-----ttctg
i Cheirogaleus_medius.k141_759766                        C 0 I 4
s Cheracebus_lucifer.k141_2312002                             5979  7 -     32913 tt-----taata
i Cheracebus_lucifer.k141_2312002                        I 1 C 0
s Cheracebus_lugens.k141_1179667                             16392  7 -     40346 tt-----taata
i Cheracebus_lugens.k141_1179667                         I 1 C 0
s Cheracebus_regulus.k141_471822                             16656  7 +    216457 tt-----taata
i Cheracebus_regulus.k141_471822                         I 1 C 0
s Cheracebus_torquatus.k141_890198                           16435  7 +     39636 tt-----taata
i Cheracebus_torquatus.k141_890198                       I 1 C 0
s Chiropotes_albinasus.k141_1946120                            854  7 +      5346 tt-----taata
i Chiropotes_albinasus.k141_1946120                      I 1 C 0
s Chiropotes_israelita.k141_313004                           39525  7 -    112038 tt-----taata
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5097  7 +     34062 tt-----taata
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339811  7 +  18827391 TT-----TAATG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6422  7 -     44032 tt-----taatg
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301137  7 - 135778131 tt-----taatg
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405686  7 -   2368649 tt-----taatg
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374845  7 - 200372422 tt-----taatg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5570  7 -      6605 tt-----taatg
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804295  2 +  53390261 CT----------
i Condylura_cristata.JH655891.1                          I 10 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9408  2 +     10921 tt----------
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 1 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129               795  2 +     87169 gg----------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 6 I 1
s Dasypus_novemcinctus.JH564415.1                          2107193  2 -   2246927 tt----------
i Dasypus_novemcinctus.JH564415.1                        I 5 I 1
s Daubentonia_madagascariensis.ctg71                        289544  7 +  12879189 tt-----ttctt
i Daubentonia_madagascariensis.ctg71                     C 0 I 9
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661388  2 -   1390856 tt----------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 7 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                  136181  2 -    198055 tt----------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 7 I 1
s Eidolon_helvum.AWHC01266696.1                               2776  2 +     19438 tt----------
i Eidolon_helvum.AWHC01266696.1                          I 8 I 1
s Enhydra_lutris.KZ291758.1                               24912861  2 +  41312741 gg----------
i Enhydra_lutris.KZ291758.1                              I 5 I 1
s Equus_asinus.JREZ01000139.1                              3038349  2 -   4378816 tt----------
i Equus_asinus.JREZ01000139.1                            I 7 I 1
s Equus_caballus.CM000403.2                               21372283  2 +  39960074 tt----------
i Equus_caballus.CM000403.2                              I 7 I 1
s Equus_przewalskii.KK951119.1                              409069  2 -    498745 tt----------
i Equus_przewalskii.KK951119.1                           I 7 I 1
s Erythrocebus_patas.Contig38                               259369  7 +  21539334 TT-----TAATG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12508  7 -     24895 tt-----ttctG
i Eulemur_albifrons.k141_51491                           C 0 I 9
s Eulemur_collaris.k141_601111                               40220  7 -     70999 tt-----ttctG
i Eulemur_collaris.k141_601111                           C 0 I 9
s Eulemur_coronatus.k141_384460                              84180  7 +    112731 tt-----ttctg
i Eulemur_coronatus.k141_384460                          C 0 I 9
s Eulemur_flavifrons.k141_433119                             40752  7 +     68309 tt-----ttctG
i Eulemur_flavifrons.k141_433119                         C 0 I 9
s Eulemur_fulvus.k141_636316                                 51077  7 -     65740 tt-----ttctG
i Eulemur_fulvus.k141_636316                             C 0 I 9
s Eulemur_macaco.k141_1562045                                21707  7 -     75513 tt-----ttctG
i Eulemur_macaco.k141_1562045                            C 0 I 9
s Eulemur_mongoz.k141_232305                                 45900  7 -     97555 tt-----ttctg
i Eulemur_mongoz.k141_232305                             C 0 I 9
s Eulemur_rubriventer.k141_1423786                            2627  7 +     30972 tt-----ttctg
i Eulemur_rubriventer.k141_1423786                       C 0 I 9
s Eulemur_rufus.k141_514691                                  40350  7 -     52037 tt-----ttctG
i Eulemur_rufus.k141_514691                              C 0 I 9
s Eulemur_sanfordi.k141_1122526                              56751  7 -    111500 tt-----ttctG
i Eulemur_sanfordi.k141_1122526                          C 0 I 9
s Felis_catus.CM001381.2                                 186243221  2 - 206538554 gg----------
i Felis_catus.CM001381.2                                 I 6 I 1
s Felis_catus_fca126.CM031415.1                          185113003  2 - 205367284 gg----------
i Felis_catus_fca126.CM031415.1                          I 6 I 1
s Felis_nigripes.FelNig_flattened_line_31944                 24351  2 -     30238 gg----------
i Felis_nigripes.FelNig_flattened_line_31944             I 6 I 1
s Galago_moholi.ctg3793                                     119865  3 -    137831 TT-----T----
i Galago_moholi.ctg3793                                  C 0 I 16
s Galago_senegalensis.k141_991736                             3405  3 +     22493 TT-----T----
i Galago_senegalensis.k141_991736                        C 0 I 16
s Galagoides_demidoff.k141_561628                            16874  3 +     32986 TT-----T----
i Galagoides_demidoff.k141_561628                        C 0 I 16
s Galeopterus_variegatus.GalVar_scaffold_132127               3820  7 +      5976 tt-----taatg
i Galeopterus_variegatus.GalVar_scaffold_132127          I 162 C 0
s Gorilla_beringei.k141_3358147                               1494  7 -      8343 ct-----taatg
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                250994  7 - 186649187 CT-----Taatg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12437  7 -     40692 tt-----ttctG
i Hapalemur_alaotrensis.k141_330369                      C 0 I 9
s Hapalemur_gilberti.k141_646465                             33839  7 +     49394 tt-----ttctg
i Hapalemur_gilberti.k141_646465                         C 0 I 9
s Hapalemur_griseus.k141_763500                              58707  7 -     66874 tt-----ttctG
i Hapalemur_griseus.k141_763500                          C 0 I 9
s Hapalemur_meridionalis.k141_258450                          7584  7 -     42923 tt-----ttctg
i Hapalemur_meridionalis.k141_258450                     C 0 I 5
s Hapalemur_occidentalis.k141_578367                         14580  7 -     53142 tt-----ttctG
i Hapalemur_occidentalis.k141_578367                     C 0 I 9
s Helogale_parvula.HelPar_flattened_line_2585                27342  2 -    327341 gg----------
i Helogale_parvula.HelPar_flattened_line_2585            I 16 I 1
s Hipposideros_armiger.JXIK01000431.1                      1546669  2 -   1711038 tt----------
i Hipposideros_armiger.JXIK01000431.1                    I 11 I 1
s Hipposideros_galeritus.HipGal_scaffold_23202               45988  2 +     49977 TT----------
i Hipposideros_galeritus.HipGal_scaffold_23202           I 14 I 1
s Hoolock_leuconedys.ctg274                                    138888  7 -    630532 tt-----taatg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65785  2 +     83186 ag----------
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 6 I 1
s Hylobates_agilis.k141_1155965                               1921  7 +     12352 tt-----taatg
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9104  7 +     55766 tt-----taatg
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048443  7 + 191637585 tt-----taatg
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797775  7 +  11177569 tt-----taatg
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_1634743                                     858  7 -      1784 tt-----ttctg
i Indri_indri.k141_1634743                               C 0 I 228
s Lagothrix_lagothricha.k141_246028                          40240  7 +    110728 tt-----taata
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757228  7 +  30322482 tt-----ttctg
i Lemur_catta.scaffold_24                                C 0 I 9
s Leontocebus_fuscicollis.k141_2994775                         934  7 -     13097 tt-----taata
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            885  7 +      5940 tt-----taata
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         516  7 -      5717 tt-----taata
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7143  7 -     11567 tt-----taata
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8524  7 -     12945 tt-----taata
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5886  7 +     29618 tt-----ttctg
i Lepilemur_ankaranensis.k141_567626                     C 0 I 8
s Lepilemur_dorsalis.k141_387009                              5883  7 +     31569 tt-----ttctg
i Lepilemur_dorsalis.k141_387009                         C 0 I 8
s Lepilemur_ruficaudatus.k141_330196                          5896  7 +     24756 tt-----ttctg
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 8
s Lepilemur_septentrionalis.k141_360456                       5888  7 +     16388 tt-----ttctg
i Lepilemur_septentrionalis.k141_360456                  C 0 I 8
s Leptonychotes_weddellii.KB714746.1                        810218  2 -   3914936 gg----------
i Leptonychotes_weddellii.KB714746.1                     I 5 I 1
s Lophocebus_aterrimus.ctg367                               329546  7 -   1826925 tt-----taatg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2876  3 +     19643 tt-----t----
i Loris_lydekkerianus.k141_2031736                       I 1 I 16
s Loris_tardigradus.ctg83                                  5036535  3 -   6120653 tt-----t----
i Loris_tardigradus.ctg83                                I 1 I 16
s Lycaon_pictus.CM007581.1                                41611398  2 +  59628241 ag----------
i Lycaon_pictus.CM007581.1                               I 5 I 1
s Macaca_arctoides.k141_1757516                              41828  7 -     61512 tt-----taatg
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369456  7 -  60120075 tt-----taatg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21776  7 +     30207 tt-----taatg
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18879  7 -     24934 tt-----taatg
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21662  7 +     30527 tt-----taatg
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32852  7 -     50087 tt-----taatg
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42590  7 +     51645 tt-----taatg
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411164  7 - 187317192 tt-----taatg
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396047  7 +  25927173 tt-----taatg
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45178  7 -     62418 tt-----taatg
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21866  7 +     24253 tt-----taatg
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41623  7 +     59329 tt-----taatg
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267455  7 +    668171 tt-----taatg
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18801  7 +     21031 tt-----taatg
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32534  7 +     33478 tt-----taatg
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318929  7 +  24302211 tt-----taatg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353761  7 -    752769 tt-----taatg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670439  2 -    737560 tt----------
i Manis_javanica.JSZB01003497.1                          I 7 I 1
s Manis_pentadactyla.KN006162.1                             217733  2 +    317179 tt----------
i Manis_pentadactyla.KN006162.1                          I 7 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                       146893  2 +    207569 tt----------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 I 11
s Mellivora_capensis.MelCap_flattened_line_19308             22732  2 -     74585 GG----------
i Mellivora_capensis.MelCap_flattened_line_19308         I 5 I 1
s Microcebus_murinus.CM007674.1                           74981497  7 +  93316391 tt-----ttctg
i Microcebus_murinus.CM007674.1                          C 0 I 6
s Micronycteris_hirsuta.MicHir_scaffold_2233                181136  2 +    200668 tt----------
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 9 I 1
s Miopithecus_ogouensis.k141_1534655                         18922  7 -     27822 tt-----taatg
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5227  2 +     27589 gg----------
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 5 I 1
s Mirza_zaza.k141_766280                                     49358  7 -     62432 tt-----ttccg
i Mirza_zaza.k141_766280                                 C 0 I 6
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175322  2 +    366855 tg----------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 9 I 1
s Mungos_mungo.MunMun_flattened_line_18455                   15081  2 -     63510 ca----------
i Mungos_mungo.MunMun_flattened_line_18455               I 17 I 1
s Mustela_putorius.JH418006.1                             14351670  2 +  14710649 gg----------
i Mustela_putorius.JH418006.1                            I 5 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116647  1 +    130748 t-----------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 5 I 1
s Nasalis_larvatus.k141_1350636                              25224  7 +     34575 tt-----taatg
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465612  2 -  31847680 gg----------
i Neomonachus_schauinslandi.NINY01007730.1               I 5 I 1
s Noctilio_leporinus.NocLep_scaffold_7894                   123987  2 -    149072 TT----------
i Noctilio_leporinus.NocLep_scaffold_7894                I 239 I 1
s Nomascus_annamensis.k141_1771965                           50173  7 -    132029 tt-----taatg
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6269  7 -     16345 tt-----taatg
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12152  7 +     22201 tt-----taatg
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410489  7 -  22158432 tt-----taatg
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22552  7 -     54323 tt-----taatg
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195013  2 +   9404916 ag----------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 5 I 1
s Nycticebus_bengalensis.LG01                             93631651  3 + 196305487 tt-----t----
i Nycticebus_bengalensis.LG01                            I 2 I 16
s Nycticebus_coucang.k141_8166032                             1040  3 +      2758 tt-----t----
i Nycticebus_coucang.k141_8166032                        I 2 I 16
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559905  3 - 199412804 tt-----t----
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 I 16
s Odobenus_rosmarus.KB229312.1                             1448396  2 +   2017862 gg----------
i Odobenus_rosmarus.KB229312.1                           I 5 I 1
s Otocyon_megalotis.JAEUCK010005147.1                        36061  2 +    559221 ag----------
i Otocyon_megalotis.JAEUCK010005147.1                    I 5 I 1
s Otolemur_crassicaudatus.k141_85057                         23139  3 -     23432 TT-----T----
i Otolemur_crassicaudatus.k141_85057                     C 0 I 16
s Otolemur_garnettii.GL873799.1                             347704  3 +   1103335 tt-----t----
i Otolemur_garnettii.GL873799.1                          C 0 I 16
s Pan_troglodytes.CM009242.2                               1468383  7 - 189151597 ct-----taatg
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20941  2 -    230217 gg----------
i Panthera_onca.PanOnc_flattened_line_3271               I 6 I 1
s Panthera_pardus.KV860321.1                              18458267  2 -  18783137 gg----------
i Panthera_pardus.KV860321.1                             I 6 I 1
s Panthera_tigris.KE722367.1                               3968992  2 +   8748460 gg----------
i Panthera_tigris.KE722367.1                             I 6 I 1
s Papio_anubis.CM001495.2                                   239773  7 - 183742232 tt-----taatg
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6240  7 +     21308 tt-----taatg
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287277  7 -  20919399 tt-----taatg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18893  7 -     27687 tt-----taatg
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12029  7 +     16796 tt-----taatg
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18839  7 -     23640 tt-----taatg
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11856  2 +     78924 ag----------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 6 I 1
s Perodicticus_ibeanus.k141_1921260                          21758  3 +     31479 tt-----t----
i Perodicticus_ibeanus.k141_1921260                      I 2 I 17
s Perodicticus_potto.k141_1854441                            14129  3 -     24908 tt-----t----
i Perodicticus_potto.k141_1854441                        I 2 I 16
s Piliocolobus_badius.k141_2495623                            5678  7 +      7560 tg-----taatg
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61385  7 -     63152 TG-----TAATG
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43984  7 +     45295 tg-----taatg
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1663  7 +      5735 TG-----taatg
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             61875  7 +    207309 tt-----taata
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          2995  7 -     25401 tt-----taata
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28710  7 +     58159 tt-----taata
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28986  7 +     63561 tt-----taata
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28749  7 +     51148 tt-----taata
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553742  7 -   4542175 tt-----taata
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28733  7 +     51125 tt-----taata
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5153  7 +     39866 tt-----taata
i Plecturocebus_bernhardi.k141_2549090                   I 1 C 0
s Plecturocebus_brunneus.k141_862875                           240  7 -      9282 tt-----taata
i Plecturocebus_brunneus.k141_862875                     I 1 C 0
s Plecturocebus_caligatus.k141_1382851                       39641  7 -     87950 tt-----taata
i Plecturocebus_caligatus.k141_1382851                   I 1 C 0
s Plecturocebus_cinerascens.k141_1164729                     40034  7 -     88961 tt-----taata
i Plecturocebus_cinerascens.k141_1164729                 I 1 C 0
s Plecturocebus_cupreus.k141_2351393                          4733  7 -     39403 tt-----taata
i Plecturocebus_cupreus.k141_2351393                     I 1 C 0
s Plecturocebus_dubius.k141_1058799                          39687  7 +     87928 tt-----taata
i Plecturocebus_dubius.k141_1058799                      I 1 C 0
s Plecturocebus_grovesi.k141_2013005                          4731  7 -     60166 tt-----taata
i Plecturocebus_grovesi.k141_2013005                     I 1 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11667  7 -     67232 tt-----taata
i Plecturocebus_hoffmannsi.k141_3303950                  I 1 C 0
s Plecturocebus_miltoni.k141_349282                          39583  7 -     90634 tt-----taata
i Plecturocebus_miltoni.k141_349282                      I 1 C 0
s Plecturocebus_moloch.k141_1031110                          41051  7 +     89403 tt-----taata
i Plecturocebus_moloch.k141_1031110                      I 1 C 0
s Pongo_abelii.CM009266.2                                   174000  7 - 189387572 Ct-----taatg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      188998  7 -   9816681 ct-----taatg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24161  7 +     69807 tt-----taatg
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41356  7 -     80239 tt-----taatg
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980384  7 +   4620579 tt-----ttctg
i Prolemur_simus.MPIZ01000396.1                          C 0 I 9
s Propithecus_coquerelli.NW_012148875.1                    1562971  7 -   2598838 tt-----ttccg
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 21
s Propithecus_coronatus.k141_209299                            613  7 -      7103 tt-----tTCCA
i Propithecus_coronatus.k141_209299                      C 0 I 8
s Propithecus_diadema.k141_153680                             1213  7 -     11706 tt-----ttccg
i Propithecus_diadema.k141_153680                        C 0 I 8
s Propithecus_edwardsi.k141_635656                            4948  7 -     30655 tt-----ttccg
i Propithecus_edwardsi.k141_635656                       C 0 I 8
s Propithecus_perrieri.k141_1496898                          31273  7 +     46564 tt-----tTCCG
i Propithecus_perrieri.k141_1496898                      C 0 I 8
s Propithecus_verreauxi.k141_1047036                          5182  7 +     35169 tt-----ttccg
i Propithecus_verreauxi.k141_1047036                     C 0 I 15
s Pteronotus_parnellii.KE847780.1                            48381  2 -     66298 tt----------
i Pteronotus_parnellii.KE847780.1                        I 9 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1454  2 -     18639 GG----------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 5 I 1
s Pteropus_alecto.KB030862.1                               5837358  2 -  28871421 tt----------
i Pteropus_alecto.KB030862.1                             I 8 I 2
s Pteropus_vampyrus.KN525825.1                             3533919  2 -   4952924 tt----------
i Pteropus_vampyrus.KN525825.1                           I 8 I 2
s Puma_concolor.QAVW01001104.1                            18095818  2 +  38429054 gg----------
i Puma_concolor.QAVW01001104.1                           I 6 I 1
s Pygathrix_cinerea.k141_1153803                             23549  7 +     91421 tt-----taatg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150041  7 -   7812017 tt-----taatg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4418  7 +     72585 tt-----taatg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2910004  2 +   3329780 tt----------
i Rhinolophus_sinicus.LVEH01000134.1                     I 13 I 1
s Rhinopithecus_bieti.k119_221883                            25382  7 +     27361 tt-----taatg
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118732  7 + 195417433 tt-----taatg
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232990  7 -   7961872 tt-----taatg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71381  2 -    116970 tt----------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 8 I 2
s Saguinus_bicolor.k141_1429097                                852  7 +     27962 tt-----taata
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              865  7 +      6077 tt-----taata
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              878  7 +      5971 tt-----taata
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                933  7 +      5932 tt-----taata
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1079  7 -      2099 tt-----taata
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388111  7 - 209938924 tt-----taata
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 880  7 +      5979 tt-----taata
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1264  7 -      4301 tt-----taata
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235320  7 +   5703754 tt-----tgata
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4910  7 +     21866 tt-----tgata
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113057  2 +    313613 ct----------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 10 I 1
s Semnopithecus_entellus.k141_158471                         21870  7 +     27374 tt-----taatg
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25387  7 +     58920 tt-----taatg
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11882  7 -     45317 tt-----taatg
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19539  7 -     42441 tt-----taatg
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22221  7 -     29113 tt-----taatg
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25293  7 -     48123 tt-----taatg
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855755  2 -   1910179 TT----------
i Solenodon_paradoxus.SolPar_flattened_line_126          I 6 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525              3457  2 -     97271 GG----------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 I 1
s Suricata_suricatta.SurSur_flattened_line_6629             121489  2 +    196729 gg----------
i Suricata_suricatta.SurSur_flattened_line_6629          I 12 I 1
s Symphalangus_syndactylus.tarseq_199                       387470  7 +   1523678 tt-----taatg
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1515  2 -      2009 tg----------
i Tamandua_tetradactyla.TamTet_scaffold_445853           I 5 I 1
s Tapirus_indicus.TapInd_scaffold_7432                      188122  2 +    199430 tt----------
i Tapirus_indicus.TapInd_scaffold_7432                   I 7 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    102077  2 -    539355 tt----------
i Tapirus_terrestris.TapTer_scaffold_755                 I 7 I 1
s Tarsius_lariang.k141_1780720                                4170 12 +      6850 tttcctttaatg
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4209 12 +     20590 ttccctttaatg
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349758  7 - 186847797 tt-----taatg
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16857  2 -     31044 tt----------
i Tolypeutes_matacus.TolMat_scaffold_31955               I 5 I 1
s Tonatia_saurophila.TonSau_scaffold_294                    476196  2 -    610378 tt----------
i Tonatia_saurophila.TonSau_scaffold_294                 I 9 I 1
s Trachypithecus_auratus.k141_1189070                        17434  7 +     26378 tt-----taatg
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30115  7 -     78344 tt-----taatg
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16755  7 +     25722 tt-----taatg
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24978  7 -     62838 tt-----taatg
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25095  7 +     46913 tt-----taatg
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5905  7 -     28527 tt-----taatg
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26917  7 -     64340 TT-----TAATG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24954  7 -     63452 TT-----TAATG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6396  7 +     22490 tt-----taatg
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         4007  7 +      4141 tt-----taatg
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6822  7 -     13050 tt-----taatg
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252057  7 -   6242583 tt-----taatg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57789  7 +     59866 tt-----taatg
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830060  6 -   4065304 tt------tatg
i Tupaia_chinensis.KB320699.1                            I 6 I 1
s Tupaia_tana.TupTan_flattened_line_394                       4612  6 -     70247 TT------TATG
i Tupaia_tana.TupTan_flattened_line_394                  I 6 I 1
s Uropsilus_gracilis.UroGra_scaffold_7153                   104281  2 -    105689 tt----------
i Uropsilus_gracilis.UroGra_scaffold_7153                I 10 I 1
s Ursus_maritimus.KK499267.1                                178346  2 +   5085361 ga----------
i Ursus_maritimus.KK499267.1                             I 5 I 1
s Varecia_rubra.k141_787544                                  22025  7 -     30710 tt-----ttccg
i Varecia_rubra.k141_787544                              C 0 I 9
s Varecia_variegata.k141_289850                              20932  7 -    147434 tt-----ttccg
i Varecia_variegata.k141_289850                          C 0 I 9
s Vulpes_lagopus.VulLag_flattened_line_12041                101779  2 -    112863 ag----------
i Vulpes_lagopus.VulLag_flattened_line_12041             I 5 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732         25616  2 -     86975 gg----------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 5 I 1
e Callibella_humilis.k141_1233062                             7118  0 +     18648 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_tattersalli.k141_1127767                       91563  0 -     98465 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pipistrellus_pipistrellus.PipPip_scaffold_20257            46432  3 +     46691 I
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        2568  3 +      3929 I
e Myotis_lucifugus.GL429869.1                               378847  4 +   4330536 I
e Myotis_davidii.KB100139.1                                4379029  4 +   6019432 I
e Myotis_brandtii.KE162005.1                               9788617  4 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          34166  3 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mico_schneideri.k141_1877700                                     15636  0 -     26561 C
e Mico_humeralifer.k141_1180625                               7674  0 -     12984 C
e Mico_argentatus.k141_582562                                 6901  0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                219726 71 -    270270 I
e Loxodonta_africana.GL010049.1                           39077390  4 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12574263  3 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Cebuella_pygmaea.k141_145798                               39899  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           2013  0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              16727  0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165450434  0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           15478  0 +     17162 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1147 50 +     36723 TTT-----C--TTTAAAA-----CTT-TGT-A-GGGT-----------GT-T-----------CTTAGTGTT-TCCTT-TT-CT-GTGG---AAC
s Acinonyx_jubatus.LLWD01001279.1                           809567 46 +   1699592 -------------------------t-ttt-a-agat-----------tt-t-ctaggatactcttagagtt-ttcca-t--tt-tggg---gac
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411694 46 +  29979442 -------------------------t-ttc-a-atat-----------tt-t-ctaggatattcttagtatt-ttcct-t--tt-gggg---aat
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 I 131
s Allenopithecus_nigroviridis.k141_3755588                   44461 24 +     53615 ----------------------------------------------------------------ttagtgtt-tcctt-tt-ct-gtgg---aac
i Allenopithecus_nigroviridis.k141_3755588               I 21 C 0
s Allochrocebus_lhoesti.k141_441277                          40255 50 +     44087 ttt-----c--tttaaaa-----ctt-tct-t-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         12959 50 -     21945 TTT-----C--TTTAAAA-----CTT-TCT-T-GGAT-----------GT-T-----------CTTAGTGTT-TCCTT-TT-CT-GTGG---AAC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14637 50 +     32033 TTT-----C--TTTAAAA-----CTT-TCT-T-GGAT-----------GT-T-----------CTTAGTGTT-TCCTT-TT-CT-GTGG---AAC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69202 50 -     84148 ttt-----c--tttaaaa-----ctt-tct-a-agat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41425 50 -     78289 ttt-----c--tttaaaa-----ctt-tct-a-agat-----------gt-t-----------cttaatgtt-tcctt-tt-ct-gtgg---aat
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40873 50 +     55831 ttt-----c--tttaaaa-----ctt-tct-a-agat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39314 50 -     64179 ttt-----c--tttaaaa-----ctt-tct-a-agat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           20957 50 -     24835 ttt-----c--tttaaaa-----ctt-tct-a-agat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37940 50 +     45454 ttt-----c--tttaaaa-----ctt-tct-a-agat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43639 50 +     70886 ttt-----c--tttaaaa-----ctt-tct-a-agat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5766 50 +     30854 ttt-----c--tttaaaa-----ctt-tct-a-agat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29905 50 +     42133 ttt-----c--tttaaaa-----ctt-tct-a-agat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173169 46 -    412891 -------------------------c-ttt-a-aaac-----------tt-t-ctaggatattcttagggtt-TCCTT-T--TT-GGGG---AAT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Aotus_azarae.k141_118258                                   47714 50 -     65372 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41460 50 +     43593 ttt-----c--tttaaaa-----ttt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669472 50 +   5030052 ttt-----c--tttaaaa-----ctt-tct-A-GGAT-----------GT-T-----------Cttagtgtt-tcctt-tt-ct-gtgg---aat
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21114 50 -     23494 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6250 50 +      8415 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16334 18 -     45910 ----------------------------------------------------------------------TT-TCTTT-TT-TT-GGGG---AAT
i Arctocebus_calabarensis.k141_1364444                   I 15 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                   997 46 -     15198 -------------------------c-ttt-a-aaac-----------tt-t-ctaggatattcttagggtt-TCCCT-t--tc-gggg---aat
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 1 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271700 50 +  21539123 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7871 50 +     48076 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3005 50 -     28759 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30557 50 +     44353 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45932 50 -     71267 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                19988 50 -     33135 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3117 52 +     11645 ttttt---c--tttttaa-----ttt-ttt-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-tg-ggag---aat
i Avahi_laniger.k141_2756659                             I 8 C 0
s Avahi_peyrierasi.k141_1823318                               3119 51 -     19611 tttt----c--tttttaa-----ttt-ttt-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-tg-ggag---aat
i Avahi_peyrierasi.k141_1823318                          I 8 C 0
s Cacajao_ayresi.k141_96119                                   4892 50 +     28062 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------ctcagtgtt-tcctt-tt-ct-gtgg---aat
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40186 50 -     91139 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------ctcagtgtt-tcctt-tt-ct-gtgg---aat
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17712 50 +     95584 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------ctcagtgtt-tcctt-tt-ct-gtgg---aat
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17625 50 +    119600 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------ctcagtgtt-tcctt-tt-ct-gtgg---aat
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7118 49 +     18648 -tt-----c--tttaaaa-----ctt-tcc-a-ggat-----------at-t-----------cttagtgtc-tcctt-tt-ct-gtgg---aat
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6802 50 -     13885 ttt-----c--tttaaaa-----ctt-tcc-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15478 49 +     17162 -tt-----c--tttaaaa-----ctt-tcc-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450434 49 + 189096842 -TT-----C--TTTAAAA-----CTT-TCC-A-GGAT-----------GT-T-----------CTTAGTGTT-TCCTT-TT-CT-GTGG---AAT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16727 49 -     18408 -tt-----c--tttaaaa-----ctt-tcc-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502130 47 +  60362399 -------------------------t-ttt-a-agag-----------tt-t-ctaggatattcttagtatt-ttcct-t-ttt-tggg---aac
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5760 47 -     23171 -------------------------t-ttt-a-agag-----------tt-t-ctaggatattcttagtatt-ttcct-t-ttt-tggg---aac
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219121 47 +   9314153 -------------------------t-ttt-A-AGAG-----------TT-TCTAGGAT-ATtcttagtatt-ttcct-t-ttt-tggg---aac
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            41612246 47 +  59632846 -------------------------t-ttt-a-agag-----------tt-t-ctaggatattcttagtatt-ttcct-t-ttt-tggg---aac
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            45103816 47 -  63665305 -------------------------T-TTT-A-AGAG-----------TT-TCTAGGAT-ATtcttagtatt-ttcct-t-ttt-tggg---aac
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Carlito_syrichta.NW_007259797.1                           267495 47 +    496798 -----------GTCAAAA-----TTT-TCT-A-GGAT-----------GT-t-----------cttagtgtt-tcttt-tt-ttcgagG---CAT
i Carlito_syrichta.NW_007259797.1                        I 4 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               1056 46 +      5315 -------------------------c-ttt-a-acac-----------tt-t-ctaggatattcttagggtt-TCCTT-T--TT-GGGG---AAt
i Carollia_perspicillata.CarPer_scaffold_170178          I 1 C 0
s Cebuella_niveiventris.k141_592277                           2013 49 -     12580 -tt-----c--tttaaaa-----ctt-tcc-a-ggat-----------at-t-----------cttagtgtc-tcctt-tt-ct-gtgg---aat
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39899 49 +     53515 -tt-----c--tttaaaa-----ctt-tcc-a-ggat-----------at-t-----------cttagtgtc-tcctt-tt-ct-gtgg---aat
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368104 37 -  26074798 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcc-------------------
i Cebus_albifrons.Contig27                               C 0 I 9
s Cebus_olivaceus.k141_1404781                                4993 37 -     34880 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcc-------------------
i Cebus_olivaceus.k141_1404781                           C 0 I 9
s Cebus_unicolor.k141_1654760                                64088 37 -     89041 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-TCC-------------------
i Cebus_unicolor.k141_1654760                            C 0 I 9
s Cephalopachus_bancanus.k141_72622                            658 53 -      1636 ttt-----tttgtcaaaa-----ttt-tct-a-ggat-----------gt-a-----------cttagtgtt-tcttt-tt-tatgagg---cat
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489107 46 -  27778364 -------------------------c-ttt-a-aaca-----------tt-t-ctagaatattcttagtgtt-tccct-t--tt-tggg---aat
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15940 46 +     27315 -------------------------c-ttt-a-aaca-----------tt-t-ctagaatattcttagtgtt-tccct-t--tt-tggg---aat
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 1 C 0
s Cercocebus_atys.KQ010504.1                                137598 50 -   4669795 ttt-----c--tttaaaa-----ctt-tct-A-GGAT-----------GT-T-----------Cttagtgtt-tcctt-tt-ct-gtgg---aaC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41338 50 +     47900 TTT-----C--TTTAAAA-----CTT-TCT-A-GGAT-----------GT-T-----------CTTAGTGTT-TCCTT-TT-CT-GTGG---AAC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41170 50 -     44860 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41152 50 -    148725 TTT-----C--TTTAAAA-----CTT-TCT-A-GGAT-----------GT-T-----------CTTAGTGTT-TCCTT-TT-CT-GTGG---AAC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24214 50 -     40656 ttc-----c--tttaaaa-----ctt-tct-t-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4149 50 +     20796 ttt-----c--tttaaaa-----ctt-tct-t-agat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8404 50 -     17524 ttt-----c--tttaaaa-----ctt-tct-t-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24093 50 -     34525 ttt-----c--tttaaaa-----ctt-tct-t-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtga---aac
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8804 49 -     25376 ttt-----c--tttaaaa-----ctt-tct-t-ggat-----------gt-t-----------cttagtgtt-tcc-t-tt-ct-gtgg---aac
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361369 50 -  39242232 ttt-----c--tttaaaa-----ctt-tct-t-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267114 49 +  21565898 TTT-----C--TTTAAAA-----CTT-TCT-T-GGAT-----------GT-T-----------CTTAGTGTT-TCC-T-TT-CT-GTGG---AAC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28567 50 -     45857 TTT-----C--TTTAAAA-----CTT-TCT-T-GGAT-----------GT-T-----------CTTAGTGTT-TCCTT-TT-CT-GTGG---AAC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24358 50 -     32606 ttt-----c--tttaaaa-----ctt-tct-t-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          545 50 +      8499 ttt-----c--tttaaaa-----ctt-tct-t-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22057 50 +     70610 ttt-----c--tttaaaa-----ctt-tct-t-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18922 50 +     36323 ttt-----c--tttaaaa-----ctt-tct-t-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9878 50 -     19938 -------------------------c-ttt-a-atattgctttaaaattt-c-ctaggatattcttagtgtt-tccca-t--tt-----------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 1 I 5
s Cheirogaleus_major.k141_666340                             27543 52 -     33796 --------t--attttaaaaaaaatt-ttt-a-ggat-----------gt-t-----------cttagtgtt-ttatt-tt-tg-gggg---aat
i Cheirogaleus_major.k141_666340                         I 4 C 0
s Cheirogaleus_medius.k141_759766                             1730 52 -     15404 --------t--tttaaaaaaaatttt-ttt-a-ggat-----------gt-t-----------cttagtgtt-TTATT-TT-TG-GAGG---AAT
i Cheirogaleus_medius.k141_759766                        I 4 C 0
s Cheracebus_lucifer.k141_2312002                             5986 50 -     32913 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16399 50 -     40346 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16663 50 +    216457 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16442 50 +     39636 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            861 50 +      5346 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gg-t-----------cttagcgtt-tcctt-ct-ct-gtgg---aat
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39532 50 -    112038 ttt-----c--tttaaaa-----ctt-tct-g-ggat-----------gt-t-----------ctcagtgtt-tcctt-tt-cc-gtgg---aat
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5104 50 +     34062 ttt-----c--tttaaaa-----ctt-tct-g-ggat-----------gt-t-----------ctcagtgtt-tcctt-tt-cc-gtgg---aat
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339818 50 +  18827391 TTT-----C--TTTAAAA-----CTT-TCT-T-GGAT-----------GT-T-----------CTTAGTGTT-TCCTT-TT-CT-GTGG---AAC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6429 50 -     44032 ttt-----c--tttaaaa-----ctt-tct-t-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301144 50 - 135778131 ttt-----c--tttaaaa-----ctt-tct-t-gGAT-----------GT-T-----------Cttagtgtt-tcctt-tt-ct-gtgg---aaC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405693 50 -   2368649 ttt-----c--tttaaaa-----ctt-tCT-A-GGAT-----------AT-T-----------Cttagtgtt-tcctt-tt-ct-gtgg---aaC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374852 50 - 200372422 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------at-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5577 50 -      6605 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------at-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804298 46 +  53390261 -------------------------C-TTT-A-AATT-----------TT-CCTAGGAT-ATTCTTAGTTTG-CTTTT-T--TT-GGGA---ATC
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9411 46 +     10921 -------------------------c-ttt-a-aaat-----------tt-t-ctaggatattcttagtgtt-ttcgt-t--tt-gggg---aat
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               798 46 +     87169 -------------------------t-ttt-t-agat-----------tt-t-ctaggatattcttagtatt-ttcca-t--tt-tggg---aac
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Dasypus_novemcinctus.JH564415.1                          2107196 57 -   2246927 -------------------------c-ttt-a-atatttctttaaaattt-tctaggaT-ATTCTTAGTGTT-TCCCA-T--TT-Tgga---aat
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                        289560 50 +  12879189 TTT-----C--TTTTTAA-----TTT-TGT-A-GGAT-----------GT-T-----------CTTAGTCTT-TCCTT-TT-CT-GGGG---aat
i Daubentonia_madagascariensis.ctg71                     I 9 C 0
s Desmodus_rotundus.KZ672289.1                            11861227 24 -  20541912 ---------------------------------------------------------------CTTAGGGTT-TCCCT-T--TT-GGgg---aat
i Desmodus_rotundus.KZ672289.1                           N 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661391 46 -   1390856 -------------------------c-ttt-a-aaca-----------tt-t-ctagaatattcttagtgtt-tccct-t--tt-tggg---aat
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136184 46 -    198055 -------------------------c-ttt-a-aaca-----------tt-t-ctagaatattcttagtgtt-tccct-t--tt-tggg---aat
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Eidolon_helvum.AWHC01266696.1                               2779 46 +     19438 -------------------------c-ttt-a-aaat-----------tt-t-ctaggacATTCTTAAGATT-TCCCT-T--TT-GGgg---aat
i Eidolon_helvum.AWHC01266696.1                          I 1 C 0
s Enhydra_lutris.KZ291758.1                               24912864 49 +  41312741 -------------------------ttttt-a-agat-----------tt-t-ctaggatatttttagtttttttcct-t-ttt-tggg---aaC
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Equus_asinus.JREZ01000139.1                              3038352 46 -   4378816 -------------------------t-taa-a-aaga-----------tt-t-ctaggatattcttactgtt-tcccc-t--tt-tggg---aat
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               21372286 46 +  39960074 -------------------------t-taa-a-aaga-----------tt-t-ctaggatattcttactgtt-tcgcc-t--tt-tggg---aat
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                              409072 46 -    498745 -------------------------t-taa-a-aaga-----------tt-t-ctaggatattcttactgtt-ttgcc-t--tt-tggg---aat
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erythrocebus_patas.Contig38                               259376 50 +  21539334 TTT-----C--TTTAAAA-----CTT-TCT-T-GGAT-----------GT-T-----------CTTAGTGTT-TCCTT-TT-CT-GTGG---AAC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12524 54 -     24895 CTT-TTTCC--TTTTTAA-----CTG-TCT-A-GGAT-----------GT-T-----------CTCAGTGTT-TCCTT-TT-TG-GGAG---AAT
i Eulemur_albifrons.k141_51491                           I 9 C 0
s Eulemur_collaris.k141_601111                               40236 54 -     70999 CTT-TTTCC--TTTTTAA-----TTG-TCT-A-GGAT-----------GT-T-----------CTCAGTGTT-TCCTT-TT-TG-GGAG---AAT
i Eulemur_collaris.k141_601111                           I 9 C 0
s Eulemur_coronatus.k141_384460                              84196 54 +    112731 cttttt-cc--tttttaa-----ctt-tct-a-ggat-----------gt-t-----------ctcagtgtt-tcctt-tt-tg-ggag---aat
i Eulemur_coronatus.k141_384460                          I 9 C 0
s Eulemur_flavifrons.k141_433119                             40768 54 +     68309 CTT-TTTCC--TTTTTAA-----TTG-TCT-A-GGAT-----------GT-T-----------CTCAGTGTT-TCCTT-TT-TG-GGAG---AAT
i Eulemur_flavifrons.k141_433119                         I 9 C 0
s Eulemur_fulvus.k141_636316                                 51093 54 -     65740 CTT-TTTCC--TTTTTAA-----CTT-TCT-A-GGAT-----------GT-T-----------CTCAGTGTT-TCCTT-TT-TG-GGAG---AAT
i Eulemur_fulvus.k141_636316                             I 9 C 0
s Eulemur_macaco.k141_1562045                                21723 54 -     75513 CTT-TTTCC--TTTTTAA-----TTG-TCT-A-GGAT-----------GT-T-----------CTCAGTGTT-TCCTT-TT-TG-GGAG---AAT
i Eulemur_macaco.k141_1562045                            I 9 C 0
s Eulemur_mongoz.k141_232305                                 45916 54 -     97555 CTT-TTTCC--TTTTTAA-----TTG-TCT-A-GGAT-----------GT-T-----------CTCAGTGTT-TCCTT-TT-TG-GGAG---AAT
i Eulemur_mongoz.k141_232305                             I 9 C 0
s Eulemur_rubriventer.k141_1423786                            2643 54 +     30972 cttttt-cc--tttttaa-----ttt-tct-a-ggat-----------gt-t-----------ctcagtgtt-tcatt-tt-tg-ggag---aat
i Eulemur_rubriventer.k141_1423786                       I 9 C 0
s Eulemur_rufus.k141_514691                                  40366 54 -     52037 CTT-TTTCC--TTTTTAA-----TTG-TCT-A-GGAT-----------GT-T-----------CTCAGTGTT-TCCTT-TT-TG-GGAG---AAT
i Eulemur_rufus.k141_514691                              I 9 C 0
s Eulemur_sanfordi.k141_1122526                              56767 54 -    111500 CTT-TTTCC--TTTTTAA-----CTG-TCT-A-GGAT-----------GT-T-----------CTCAGTGTT-TCCTT-TT-TG-GGAG---AAT
i Eulemur_sanfordi.k141_1122526                          I 9 C 0
s Felis_catus.CM001381.2                                 186243224 46 - 206538554 -------------------------t-tct-a-agat-----------tt-t-ctaggatactcttagagtt-ttcca-t--tt-tggg---aac
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                          185113006 46 - 205367284 -------------------------t-tct-a-agat-----------tt-t-ctaggatactcttagagtt-ttcca-t--tt-tggg---AAC
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24354 46 -     30238 -------------------------t-tct-a-agat-----------tt-t-ctaggatactcttagagtt-ttcca-t--tt-tggg---aac
i Felis_nigripes.FelNig_flattened_line_31944             I 1 C 0
s Galago_moholi.ctg3793                                     119884 18 -    137831 ----------------------------------------------------------------------TT-TCTTT-TT-GG-GGGG---AAT
i Galago_moholi.ctg3793                                  I 16 C 0
s Galago_senegalensis.k141_991736                             3424 18 +     22493 ----------------------------------------------------------------------TT-TCTTT-TT-GG-GGGG---AAT
i Galago_senegalensis.k141_991736                        I 16 C 0
s Galagoides_demidoff.k141_561628                            16893 18 +     32986 ----------------------------------------------------------------------TT-TTCTT-TT-GG-GGGG---AAC
i Galagoides_demidoff.k141_561628                        I 16 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               3827 49 +      5976 ttt-----c--tttaaaa-----ttt-tct-a-ggat-----------gt-t-----------cttagtgtt-TCCTT-T--CT-TGGG---AAT
i Galeopterus_variegatus.GalVar_scaffold_132127          C 0 I 32
s Gorilla_beringei.k141_3358147                               1501 50 -      8343 ttt-----c--tttaaaa-----ttt-tct-a-gggt-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251001 50 - 186649187 ttt-----c--tttaaaa-----ctt-tCT-A-GGGT-----------GT-T-----------Cttagtgtt-tcctt-tt-ct-gtgg---aaC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12453 54 -     40692 CTT-TTTCC--TTTTTAA-----TTT-TCT-A-GGAT-----------GT-T-----------CTTAGTGTT-TCCTT-TT-TG-GGAG---AAT
i Hapalemur_alaotrensis.k141_330369                      I 9 C 0
s Hapalemur_gilberti.k141_646465                             33855 54 +     49394 cttttt-cc--tttttaa-----ttt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-tg-ggag---aat
i Hapalemur_gilberti.k141_646465                         I 9 C 0
s Hapalemur_griseus.k141_763500                              58723 54 -     66874 CTT-TTTCC--TTTTTAA-----TTT-TCT-A-GGAT-----------GT-T-----------CTTAGTGTT-TCCTT-TT-TG-GGAG---AAT
i Hapalemur_griseus.k141_763500                          I 9 C 0
s Hapalemur_meridionalis.k141_258450                          7596 54 -     42923 cttttt-cc--tttttaa-----ttt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-tg-ggag---aat
i Hapalemur_meridionalis.k141_258450                     I 5 C 0
s Hapalemur_occidentalis.k141_578367                         14596 54 -     53142 CTT-TTTCC--TTTTTAA-----TTT-TCT-A-GGAT-----------GT-T-----------CTTAGTGTT-TCCTT-TT-TG-GGAG---AAT
i Hapalemur_occidentalis.k141_578367                     I 9 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27345 12 -    327341 -------------------------t-gtt-a-agat-----------tt-t-------------------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            I 1 I 18
s Hipposideros_armiger.JXIK01000431.1                      1546672 46 -   1711038 -------------------------c-ttt-a-aaat-----------tt-t-ctagaatattcttagtgtt-TCCCT-T--Tt-ggga---aat
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               45991 46 +     49977 -------------------------C-TTT-A-AAAT-----------TT-TCTAGAAT-ATTCTTAGTGTT-TCCCT-T--TT-GGGA---AAT
i Hipposideros_galeritus.HipGal_scaffold_23202           I 1 C 0
s Hoolock_leuconedys.ctg274                                    138895 49 -    630532 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------g--t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65788 46 +     83186 -------------------------t-ttt-a-agat-----------tt-t-ctaggatattcttagtgtt-ttcca-t--tt-tggg---AAC
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1 C 0
s Hylobates_agilis.k141_1155965                               1928 50 +     12352 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------g-tt-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9111 50 +     55766 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------g-tt-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048450 49 + 191637585 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------g--t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797782 49 +  11177569 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------g--t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     608 54 -      1527 ttttttt-c--tttttaa-----ttt-ttt-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-tg-gggg---aat
i Indri_indri.k141_4600452                               I 21 C 0
s Lagothrix_lagothricha.k141_246028                          40247 50 +    110728 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757244 54 +  30322482 ctttct-cc--tttttaa-----ttt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-tg-ggag---aat
i Lemur_catta.scaffold_24                                I 9 C 0
s Leontocebus_fuscicollis.k141_2994775                         941 50 -     13097 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gg-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            892 50 +      5940 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gg-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         523 50 -      5717 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gg-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7150 50 -     11567 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8531 50 -     12945 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5901 54 +     29618 -tttttttc--tttttaa-----ttt-tct-a-agat-----------gt-t-----------cttagtgtt-tcctt-tt-tt-gggg---aat
i Lepilemur_ankaranensis.k141_567626                     I 8 C 0
s Lepilemur_dorsalis.k141_387009                              5898 54 +     31569 -tttttttc--tttttaa-----ttt-tct-a-agat-----------gt-t-----------cttagtgtt-tcctt-tt-tt-gggg---aat
i Lepilemur_dorsalis.k141_387009                         I 8 C 0
s Lepilemur_ruficaudatus.k141_330196                          5911 53 +     24756 -ttttt-cc--tttttaa-----ttt-tct-a-agat-----------gt-t-----------cttagtgtt-tcctt-tt-tt-gggg---aat
i Lepilemur_ruficaudatus.k141_330196                     I 8 C 0
s Lepilemur_septentrionalis.k141_360456                       5903 53 +     16388 -tttttt-c--tttttaa-----ttt-tct-a-agat-----------gt-t-----------cttagtgtt-tcctt-tt-tt-gggg---aat
i Lepilemur_septentrionalis.k141_360456                  I 8 C 0
s Leptonychotes_weddellii.KB714746.1                        810221 46 -   3914936 -------------------------t-ttt-g-agat-----------tt-t-ctaggatattcttagtatt-ttcct-t--tt-tggg---aac
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lophocebus_aterrimus.ctg367                               329553 50 -   1826925 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2895 18 +     19643 ----------------------------------------------------------------------TT-TTCTT-TT-TT-GGGA---AAT
i Loris_lydekkerianus.k141_2031736                       I 16 C 0
s Loris_tardigradus.ctg83                                  5036554 18 -   6120653 ----------------------------------------------------------------------TT-TTCTT-TT-TT-GGGA---AAT
i Loris_tardigradus.ctg83                                I 16 C 0
s Loxodonta_africana.GL010049.1                           39077394  8 +  43346337 ----------------------------------------------------------------------tc-tctaa-t---------------
i Loxodonta_africana.GL010049.1                          I 4 C 0
s Lycaon_pictus.CM007581.1                                41611401 47 +  59628241 -------------------------t-ttt-a-agag-----------tt-t-ctaggatattcttagtatt-ttcct-t-ttt-tggg---aac
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_1757516                              41835 50 -     61512 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369463 50 -  60120075 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21783 50 +     30207 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18886 50 -     24934 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21669 50 +     30527 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32859 50 -     50087 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42597 50 +     51645 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411171 50 - 187317192 ttt-----c--tttaaaa-----ctt-tCT-A-GGAT-----------GT-T-----------Cttagtgtt-tcctt-tt-ct-gtgg---aaC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396054 50 +  25927173 ttt-----c--tttaaaa-----ctt-tct-A-GGAT-----------GT-T-----------Cttagtgtt-tcctt-tt-ct-gtgg---aaC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45185 50 -     62418 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21873 50 +     24253 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41630 50 +     59329 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267462 50 +    668171 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18808 50 +     21031 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32541 50 +     33478 ttt-----c--tttaaaa-----ctt-tct-g-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318936 50 +  24302211 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353768 50 -    752769 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670442 45 -    737560 -------------------------c-ttt-a-agat-----------tt-t-tttggatattctt-gtgtt-ttcct-t--tt-tgga---tac
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                             217736 46 +    317179 -------------------------c-ttt-a-agat-----------tt-t-ttgggacattcttgatgtt-ttcct-t--tt-cgga---tac
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146906 47 +    207569 -------------------------c-ttt-a-aaat-----------tt-t-ccagggtattcctagcgtg-ttccttt--tt-ggga---aaa
i Megaderma_lyra.MegLyr_scaffold_4542                    I 11 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             22735 47 -     74585 -------------------------T-TTT-A-ATAT-----------TT-TCTAGGAT-ATTTTTAGTTTT-TTCCC-T-TTT-TGGG---AAC
i Mellivora_capensis.MelCap_flattened_line_19308         I 1 C 0
s Mico_argentatus.k141_582562                                 6901 49 +     17804 -tt-----c--tttaaaa-----ctt-tcc-a-ggat-----------at-t-----------cttagtgtc-tcctt-tt-ct-gtgg---aac
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7674 49 -     12984 -tt-----c--tttaaaa-----ctt-tcc-a-ggat-----------at-t-----------cttagtgtc-tcctt-tt-ct-gtgg---aac
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15636 49 -     26561 -tt-----c--tttaaaa-----ctt-tcc-a-ggat-----------at-t-----------cttagtgtc-tcctt-tt-ct-gtgg---aac
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981510 53 +  93316391 -tttttt-c--tttttaa-----ttt-ttt-a-ggat-----------gT-T-----------TTTAGTGTT-TCCTT-TT-TG-ATGG---AAT
i Microcebus_murinus.CM007674.1                          I 6 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181139 46 +    200668 -------------------------c-ttt-a-aagc-----------tt-t-ctaggatattcttagggtt-TCCCT-T--TT-GGGG---AAT
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         18929 50 -     27822 ttt-----c--tttaaaa-----ctt-tct-t-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5230 46 +     27589 -------------------------t-ttt-g-agat-----------tt-t-ctaggatattcttagtatt-ttcct-t--tt-tggg---aac
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 1 C 0
s Mirza_zaza.k141_766280                                     49371 51 -     62432 -tttt---c--tttttaa-----ttt-ttt-a-ggat-----------gt-t-----------ctcagtgtt-tcctt-tt-tg-gagg---aat
i Mirza_zaza.k141_766280                                 I 6 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175325 45 +    366855 -------------------------c-ttt-g-aaac-----------tt-t-ccaggatattcttagggtt-TCCCT-T---T-GGGG---AAT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15084 45 -     63510 -------------------------t-gtt-a-agat-----------tt-t-ctaagatgttcttagtgt--ttcca-t--tt-tggg---aac
i Mungos_mungo.MunMun_flattened_line_18455               I 1 C 0
s Mustela_putorius.JH418006.1                             14351673 48 +  14710649 -------------------------t-ttt-a-agat-----------tt-c-ctaagatatttttagtttttttcct-t-ttt-tggg---aac
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116649 46 +    130748 -------------------------T-TTT-A-ATAT-----------TT-TCAAGGAT-ATTCTTAGTGGT-TTCCA-T--TT-TTGG---AAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 1 C 0
s Nasalis_larvatus.k141_1350636                              25231 50 +     34575 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465615 46 -  31847680 -------------------------t-ttt-g-agat-----------tt-t-ctaggatattcttagtatt-ttcct-t--tt-tggg---aac
i Neomonachus_schauinslandi.NINY01007730.1               I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   123990 47 -    149072 -------------------------C-TTT-A-AAAC-----------AT-TCTAGGATTATTCTTAGGGTT-TCTCT-T--TG-GGAG---AAC
i Noctilio_leporinus.NocLep_scaffold_7894                I 1 C 0
s Nomascus_annamensis.k141_1771965                           50180 49 -    132029 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------g--t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6276 49 -     16345 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------g--t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12159 49 +     22201 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------g--t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410496 49 -  22158432 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------g--t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22559 49 -     54323 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------g--t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195016 47 +   9404916 -------------------------t-ttt-a-agat-----------tt-tctaggAT-ATtcttagtatt-ttcct-t-ttt-tggg---aac
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                             93631670 18 + 196305487 ----------------------------------------------------------------------TT-TTCTT-TT-TT-GGGA---AAT
i Nycticebus_bengalensis.LG01                            I 16 C 0
s Nycticebus_coucang.k141_8166032                             1059 18 +      2758 ----------------------------------------------------------------------TT-TTCTT-TT-TT-GGGA---AAT
i Nycticebus_coucang.k141_8166032                        I 16 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559924 18 - 199412804 ----------------------------------------------------------------------TT-TTCTT-TT-TT-GGGA---AAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 16 C 0
s Odobenus_rosmarus.KB229312.1                             1448399 46 +   2017862 -------------------------t-ttt-a-agat-----------tt-t-ctaggatattcttagtatt-ttcct-t--tt-tggg---aaa
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36064 47 +    559221 -------------------------t-ttt-a-agag-----------tt-t-ctaggacattcttagtatt-ttcct-t-ttt-tggg---aac
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_85057                         23158 18 -     23432 ----------------------------------------------------------------------TT-TTCTT-TT-TT-GGGG---AAT
i Otolemur_crassicaudatus.k141_85057                     I 16 C 0
s Otolemur_garnettii.GL873799.1                             347723 18 +   1103335 ----------------------------------------------------------------------tt-ttctt-tt-tt-gggg---aat
i Otolemur_garnettii.GL873799.1                          I 16 C 0
s Pan_troglodytes.CM009242.2                               1468390 50 - 189151597 ttt-----c--tttaaaa-----ttt-tct-a-gggT-----------GT-T-----------Cttagtgtt-tcctt-tt-ct-gtgg---aaC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20944 46 -    230217 -------------------------t-ttt-a-agat-----------tt-t-ctaggatactcttagagtt-ttcca-t--tt-tggg---aac
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                              18458270 46 -  18783137 -------------------------t-ttt-a-agat-----------tt-t-ctaggatactcttagagtt-ttcca-t--tt-tggg---aac
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               3968995 46 +   8748460 -------------------------t-ttt-a-agat-----------tt-t-ctaggatactcttagagtt-ttcca-t--tt-tggg---aac
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                   239780 50 - 183742232 ttt-----c--tttaaaa-----ctt-tCT-A-GGAT-----------GT-T-----------Cttagtgtt-tcctt-tt-ct-gtgg---aaC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6247 50 +     21308 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287284 50 -  20919399 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18900 50 -     27687 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-ct-ct-gtgg---aac
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12036 50 +     16796 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18846 50 -     23640 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11859 46 +     78924 -------------------------t-ttt-a-agag-----------tt-t-ctaggatattcttactatt-tccaa-t--tt-tgag---aaa
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_1921260                          21778 18 +     31479 ----------------------------------------------------------------------TT-TCTTT-TT-TT-GGGG---AAT
i Perodicticus_ibeanus.k141_1921260                      I 17 C 0
s Perodicticus_potto.k141_1854441                            14148 18 -     24908 ----------------------------------------------------------------------TT-TCTTT-TT-TT-GGGA---AAT
i Perodicticus_potto.k141_1854441                        I 16 C 0
s Piliocolobus_badius.k141_2495623                            5685 50 +      7560 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61392 50 -     63152 TTT-----C--TTTAAAA-----CTT-TCT-A-GGAT-----------GT-T-----------CTTAGTGTT-TCCTT-TT-CT-GTGG---AAC
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            43991 50 +     45295 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1670 50 +      5735 ttt-----c--tttaaaa-----ctt-tCT-A-GGAT-----------GT-T-----------Cttagtgtt-tcctt-tt-ct-gtgg---aaC
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             61882 50 +    207309 ttt-----c--cttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gcgg---aat
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3002 50 -     25401 ttt-----c--cttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28717 50 +     58159 ttt-----c--cttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gcgg---aat
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         28993 50 +     63561 ttt-----c--cttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gcgg---aat
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28756 50 +     51148 ttt-----c--cttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gcgg---aat
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553749 50 -   4542175 ttt-----c--cttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28740 50 +     51125 ttt-----c--cttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gcgg---aat
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5160 50 +     39866 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           247 50 -      9282 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39648 50 -     87950 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40041 50 -     88961 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4740 50 -     39403 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39694 50 +     87928 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4738 50 -     60166 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11674 50 -     67232 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39590 50 -     90634 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41058 50 +     89403 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aat
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174007 50 - 189387572 ttt-----c--tttaaaa-----ctt-tCT-A-GGGT-----------GT-T-----------Cttagtgtt-tcctt-tt-ct-gtgg---aaC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189005 50 -   9816681 ttt-----c--tttaaaa-----ctt-tct-a-gggt-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24168 50 +     69807 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41363 50 -     80239 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980400 54 +   4620579 cttttt-cc--tttttaa-----ttt-tct-a-ggat-----------GT-T-----------CTTAGTGTT-TCCTT-TT-TG-GGAG---AAT
i Prolemur_simus.MPIZ01000396.1                          I 9 C 0
s Propithecus_coquerelli.NW_012148875.1                    1562999 45 -   2598838 ------------ttttaa-----ttt-ttt-a-ggat-----------GT-T-----------CTTAGTGTT-TCCTT-TT-TG-GGAG---AAT
i Propithecus_coquerelli.NW_012148875.1                  I 21 C 0
s Propithecus_coronatus.k141_209299                            628 54 -      7103 TTT-TTTTC--TTTTTAA-----TTT-TTT-A-GGAT-----------GT-T-----------CTTAATGTT-TCCTT-TT-TG-GGAG---AAT
i Propithecus_coronatus.k141_209299                      I 8 C 0
s Propithecus_diadema.k141_153680                             1228 51 -     11706 tttt----c--tttttaa-----ttt-ttt-a-ggat-----------gt-t-----------cttagtgct-tcctt-tt-tg-ggag---aat
i Propithecus_diadema.k141_153680                        I 8 C 0
s Propithecus_edwardsi.k141_635656                            4963 51 -     30655 tttt----c--tttttaa-----ttt-ttt-a-ggat-----------gt-t-----------cttagtgct-tcctt-tt-tg-ggag---aat
i Propithecus_edwardsi.k141_635656                       I 8 C 0
s Propithecus_perrieri.k141_1496898                          31288 51 +     46564 TTT----TC--TTTTTAA-----TTT-TTT-A-GGAT-----------GT-T-----------CTTAGTGCT-TCCTT-TT-TG-GGAG---AAT
i Propithecus_perrieri.k141_1496898                      I 8 C 0
s Propithecus_tattersalli.k141_1127767                       91563 47 -     98465 --------c--tttTTAA-----TTT-TTT-A-GGAT-----------GT-T-----------CTTAGTGCT-TCCTT-TT-TG-GGAG---AAT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5204 45 +     35169 ------------ttttaa-----ttt-ttt-a-ggat-----------gt-t-----------cttagtgct-tcctt-tt-tg-ggag---aat
i Propithecus_verreauxi.k141_1047036                     I 15 C 0
s Pteronotus_parnellii.KE847780.1                            48384 47 -     66298 -------------------------c-ttt-gaaaac-----------tt-t-ctaggatatgCTTACAGTT-TCCCT-T--TT-GAgg---gat
i Pteronotus_parnellii.KE847780.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1457 48 -     18639 -------------------------T-TTT-A-AGAT-----------TT-TCTAGGAT-ATTTTTAGTTTTTTTCCT-T-TTT-TGGG---AAC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 1 C 0
s Pteropus_alecto.KB030862.1                               5837362 46 -  28871421 -------------------------c-ttt-a-aaat-----------tt-t-ctaggacATTCTTTGGGTT-TCCCT-T--TT-GGGG---act
i Pteropus_alecto.KB030862.1                             I 2 C 0
s Pteropus_vampyrus.KN525825.1                             3533923 46 -   4952924 -------------------------c-ttt-a-aaat-----------tt-t-ctaggacattcttagggtt-TCCCT-T--TT-GGAg---act
i Pteropus_vampyrus.KN525825.1                           I 2 C 0
s Puma_concolor.QAVW01001104.1                            18095821 46 +  38429054 -------------------------t-ttt-a-agat-----------tt-t-ctaggatactcttagagtt-ttcca-t--tt-tggg---gac
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             23556 50 +     91421 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150048 50 -   7812017 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4425 50 +     72585 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2910007 46 +   3329780 -------------------------g-ttt-a-atat-----------tt-t-ctaggattttcttagtgtt-tcccc-t--tt-ggag---aac
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_221883                            25389 50 +     27361 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118739 50 + 195417433 ttt-----c--tttaaaa-----ctt-tCT-A-GGAT-----------GT-T-----------CTTcgtgtt-tcctt-tt-ct-gtgg---aaC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             232997 50 -   7961872 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71385 46 -    116970 -------------------------c-ttt-a-aaat-----------tt-t-ctaggacattcttaaggtt-tcctt-t--tt-gggg---aat
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 2 C 0
s Saguinus_bicolor.k141_1429097                                859 50 +     27962 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gg-t-----------cttagcgtt-tcctt-ct-ct-gtgg---aat
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              872 50 +      6077 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------ag-t-----------cttagcgtt-tcctt-tt-ct-gtgg---aat
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              885 50 +      5971 ttt-----c--tttaaga-----ctt-tct-a-ggat-----------gg-t-----------cttagtgtt-tcctt-tt-ct-gtgc---aat
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                940 50 +      5932 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gg-t-----------cttaGTGTT-TCCTT-TT-CT-GTGG---AAT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1086 50 -      2099 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gg-t-----------cttaGTGTT-TCCTT-TT-CT-GTGG---AAT
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388118 50 - 209938924 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gg-t-----------cttagcgtt-tccgt-ct-ct-gtgg---aat
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 887 50 +      5979 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gg-t-----------cttaGTGTT-TCCTT-TT-CT-GTGG---AAT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1271 50 -      4301 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gg-t-----------cttagcgtt-tcctt-tt-ct-gtgg---aat
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235327 37 +   5703754 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcc-------------------
i Sapajus_apella.ctg103                                  C 0 I 9
s Sapajus_macrocephalus.k141_796559                           4917 37 +     21866 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcc-------------------
i Sapajus_macrocephalus.k141_796559                      C 0 I 9
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113060 45 +    313613 -------------------------c-ttt-a-aatg-----------tt-cctaggatatT-CCTAGTTTG-CCTT--T--TT-GGGA---CTC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_158471                         21877 50 +     27374 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25394 50 +     58920 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11889 50 -     45317 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19546 50 -     42441 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22228 50 -     29113 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25300 50 -     48123 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855758 38 -   1910179 -------------------------C-TTT-A-AATG-----------TT-TCT---------TTTAGTGTT-TCCCT-T--TT-GGGG---AGT
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3460 47 -     97271 -------------------------T-TTT-A-AGTT-----------TT-TCTATGAT-ATTTTTAGTATT-TTCCT-T-TTT-TGGC---AAC
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121492 45 +    196729 -------------------------t-gcc-a-agat-----------tt-t-ctaagatgttcttcgtgt--ttcca-t--tt-tggg---aac
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Symphalangus_syndactylus.tarseq_199                       387477 50 +   1523678 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1518 46 -      2009 -------------------------c-ttt-a-atat-----------tt-t-caaggatattcttagtggt-tccca-t--tt-tagg---aat
i Tamandua_tetradactyla.TamTet_scaffold_445853           I 1 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188125 46 +    199430 -------------------------c-tgt-a-aaag-----------tt-t-ctgggatatttttagtgtt-tctct-t--tt-tggg---aat
i Tapirus_indicus.TapInd_scaffold_7432                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102080 46 -    539355 -------------------------c-tgt-a-aaag-----------tt-t-ctgggatattcttagtgtt-tccct-t--tg-tggg---aat
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_1780720                                4182 52 +      6850 ttt-----t--gttaaaa-----ttt-tct-a-ggat-----------gt-t-----------cttagtgtt-TCTTTGTT-TTTGAGG---CAT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4221 52 +     20590 ttt-----t--gttaaaa-----ttt-tct-a-ggat-----------gt-t-----------cttagtgtt-TCTTTGTT-TTTGAGG---CAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349765 50 - 186847797 ttt-----c--tttaaaa-----ctt-tCT-A-GGAT-----------GT-T-----------Cttagtgtt-tcctt-tt-ct-gtgg---aaC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16860 57 -     31044 -------------------------c-ttt-a-atatttctttaaaattt-t-ctaggatatacttagtgtt-tacca-t--tt-ggga---aat
i Tolypeutes_matacus.TolMat_scaffold_31955               I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476199 46 -    610378 -------------------------c-ttt-a-aaac-----------tt-t-ctaggatattcttagggtt-TCCCT-T--TT-GGGG---AAT
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_1189070                        17441 50 +     26378 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30122 50 -     78344 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16762 50 +     25722 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      24985 50 -     62838 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25102 50 +     46913 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5912 50 -     28527 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26924 50 -     64340 TTT-----C--TTTAAAA-----CTT-TCT-A-GGAT-----------GT-T-----------CTTAGTCTT-TCCTT-TT-CT-GTGG---AAC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          24961 50 -     63452 TTT-----C--TTTAAAA-----CTT-TCT-A-GGAT-----------GT-T-----------CTTAGTCTT-TCCTT-TT-CT-GTGG---AAC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6403 50 +     22490 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         4014 50 +      4141 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6829 50 -     13050 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252064 50 -   6242583 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57796 50 +     59866 ttt-----c--tttaaaa-----ctt-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-ct-gtgg---aac
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830067 36 -   4065304 -------------------------t-TCC-A-GGAT-----------GA-T-----------Gttagtatt-tcctt-t--tt-tgtg---aaT
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4619 36 -     70247 -------------------------T-TCC-A-GGAT-----------GA-T-----------GTTAGTATT-TCCTT-T--TA-TGTG---AAT
i Tupaia_tana.TupTan_flattened_line_394                  I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104284 49 -    105689 -------------------------c-ttt-a-agtt-----------tt-c-ctaggatattcttagtTTG-CCTTT-T--TT-GGGAAGAAAC
i Uropsilus_gracilis.UroGra_scaffold_7153                I 1 C 0
s Ursus_maritimus.KK499267.1                                178349 46 +   5085361 -------------------------t-ttc-a-agat-----------tt-t-ctaggatattcttagtatt-ttcct-t--tt-gggg---aac
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_787544                                  22041 54 -     30710 cttttt-cc--tttttaa-----tta-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-tg-gggg---aat
i Varecia_rubra.k141_787544                              I 9 C 0
s Varecia_variegata.k141_289850                              20948 54 -    147434 cttttt-cc--tttttaa-----tta-tct-a-ggat-----------gt-t-----------cttagtgtt-tcctt-tt-tg-gggg---aat
i Varecia_variegata.k141_289850                          I 9 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101782 47 -    112863 -------------------------t-ttt-a-acag-----------tt-t-ataggatattcttagtatt-ttcct-t-ttt-tggg---aac
i Vulpes_lagopus.VulLag_flattened_line_12041             I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25619 46 -     86975 -------------------------t-ttt-a-agat-----------tt-t-ctaggatattcttagtatt-ttcct-t--tt-tggg---aaa
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pipistrellus_pipistrellus.PipPip_scaffold_20257            46432  3 +     46691 I
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        2568  3 +      3929 I
e Myotis_lucifugus.GL429869.1                               378847  4 +   4330536 I
e Myotis_davidii.KB100139.1                                4379029  4 +   6019432 I
e Myotis_brandtii.KE162005.1                               9788617  4 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          34166  3 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                219726 71 -    270270 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12574263  3 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1197 2 +     36723 C-T
s Acinonyx_jubatus.LLWD01001279.1                           809613 2 +   1699592 c-g
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411871 2 +  29979442 a-t
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 131 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44485 2 +     53615 c-t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40305 2 +     44087 c-t
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13009 2 -     21945 C-T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14687 2 +     32033 C-T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69252 2 -     84148 g-t
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41475 2 -     78289 g-t
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40923 2 +     55831 g-t
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39364 2 -     64179 g-t
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21007 2 -     24835 g-t
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37990 2 +     45454 g-t
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43689 2 +     70886 g-t
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5816 2 +     30854 g-t
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29955 2 +     42133 g-t
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173215 2 -    412891 C-T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   47764 2 -     65372 t-t
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41510 2 +     43593 t-t
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669522 2 +   5030052 t-t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21164 2 -     23494 t-t
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6300 2 +      8415 t-t
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16352 2 -     45910 C-C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  1043 2 -     15198 c-t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 478
s Ateles_geoffroyi_b.tarseq_1536                               271750 2 +  21539123 c-t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7921 2 +     48076 c-t
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3055 2 -     28759 c-t
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30607 2 +     44353 c-t
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45982 2 -     71267 c-t
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20038 2 -     33135 c-t
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3169 2 +     11645 t-g
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3170 2 -     19611 t-g
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4942 2 +     28062 c-t
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40236 2 -     91139 c-t
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17762 2 +     95584 c-t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17675 2 +    119600 c-t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7167 2 +     18648 c-g
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6852 2 -     13885 c-t
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15527 2 +     17162 c-g
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450483 2 + 189096842 T-G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16776 2 -     18408 c-g
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502177 2 +  60362399 c-t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5807 2 -     23171 c-t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219168 2 +   9314153 c-t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41612293 2 +  59632846 c-t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45103863 2 -  63665305 c-t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267542 2 +    496798 A-T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               1102 2 +      5315 c-t
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 505
s Cebuella_niveiventris.k141_592277                           2062 2 -     12580 c-g
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39948 2 +     53515 c-a
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368150 2 -  26074798 c-t
i Cebus_albifrons.Contig27                               I 9 C 0
s Cebus_olivaceus.k141_1404781                                5039 2 -     34880 c-t
i Cebus_olivaceus.k141_1404781                           I 9 C 0
s Cebus_unicolor.k141_1654760                                64134 2 -     89041 C-T
i Cebus_unicolor.k141_1654760                            I 9 C 0
s Cephalopachus_bancanus.k141_72622                            711 2 -      1636 a-t
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489153 2 -  27778364 c-t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15986 2 +     27315 c-t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137648 2 -   4669795 C-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41388 2 +     47900 C-T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41220 2 -     44860 c-t
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41202 2 -    148725 C-T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24264 2 -     40656 c-t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4199 2 +     20796 c-t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8454 2 -     17524 c-t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24143 2 -     34525 c-t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8853 2 -     25376 c-t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361419 2 -  39242232 c-t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267163 2 +  21565898 C-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28617 2 -     45857 C-T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24408 2 -     32606 c-t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          595 2 +      8499 c-t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22107 2 +     70610 c-t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18972 2 +     36323 c-t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             27595 2 -     33796 c-g
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1782 2 -     15404 C-G
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6036 2 -     32913 c-t
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16449 2 -     40346 c-t
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16713 2 +    216457 c-t
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16492 2 +     39636 c-t
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            911 2 +      5346 c-t
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39582 2 -    112038 c-t
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5154 2 +     34062 c-t
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339868 2 +  18827391 C-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6479 2 -     44032 c-t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301194 2 - 135778131 C-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405743 2 -   2368649 C-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374902 2 - 200372422 c-t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5627 2 -      6605 c-t
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804344 2 +  53390261 C-c
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9457 2 +     10921 c-t
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               844 2 +     87169 c-t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2107253 2 -   2246927 c-t
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289610 2 +  12879189 c-t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11861251 2 -  20541912 c-t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661437 2 -   1390856 c-t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136230 2 -    198055 c-t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2825 2 +     19438 c-t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Enhydra_lutris.KZ291758.1                               24912913 2 +  41312741 A-T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              3038398 2 -   4378816 c-t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21372332 2 +  39960074 c-t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409118 2 -    498745 c-t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               259426 2 +  21539334 C-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12578 2 -     24895 C-T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40290 2 -     70999 C-T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84250 2 +    112731 c-c
i Eulemur_coronatus.k141_384460                          C 0 I 1
s Eulemur_flavifrons.k141_433119                             40822 2 +     68309 C-T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51147 2 -     65740 C-T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21777 2 -     75513 C-T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45970 2 -     97555 C-T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2697 2 +     30972 c-t
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40420 2 -     52037 C-T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56821 2 -    111500 C-T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186243270 2 - 206538554 t-g
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185113052 2 - 205367284 T-G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24400 2 -     30238 t-g
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     119902 2 -    137831 C-T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3442 2 +     22493 C-T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16911 2 +     32986 G-T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15773 2 +     18121 c-t
i Galeopterus_variegatus.GalVar_scaffold_74466           I 62 C 0
s Gorilla_beringei.k141_3358147                               1551 2 -      8343 c-t
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251051 2 - 186649187 C-T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12507 2 -     40692 C-T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33909 1 +     49394 c--
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58777 2 -     66874 C-T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7650 2 -     42923 c-t
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14650 2 -     53142 C-T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27375 2 -    327341 c-t
i Helogale_parvula.HelPar_flattened_line_2585            I 18 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546718 2 -   1711038 g-t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               46037 2 +     49977 G-T
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138944 2 -    630532 c-t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65834 2 +     83186 C-T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               1978 2 +     12352 c-t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9161 2 +     55766 c-t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048499 2 + 191637585 c-t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797831 2 +  11177569 c-t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     662 2 -      1527 t-g
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40297 2 +    110728 c-t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757298 2 +  30322482 c-t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         991 2 -     13097 c-t
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            942 2 +      5940 c-t
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         573 2 -      5717 c-t
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7200 2 -     11567 t-t
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8581 2 -     12945 t-t
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5955 2 +     29618 c-t
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5952 2 +     31569 c-t
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5964 2 +     24756 c-t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5956 2 +     16388 c-t
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810267 2 -   3914936 c-t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               329603 2 -   1826925 c-t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2913 2 +     19643 C-T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036572 2 -   6120653 C-T
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611448 2 +  59628241 c-t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              41885 2 -     61512 c-t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369513 2 -  60120075 c-t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21833 2 +     30207 c-t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18936 2 -     24934 c-t
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21719 2 +     30527 c-t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32909 2 -     50087 c-t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42647 2 +     51645 c-t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411221 2 - 187317192 C-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396104 2 +  25927173 C-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45235 2 -     62418 c-t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21923 2 +     24253 c-t
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41680 2 +     59329 c-t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267512 2 +    668171 c-t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18858 2 +     21031 c-t
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32591 2 +     33478 c-t
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318986 2 +  24302211 c-t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353818 2 -    752769 c-t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670487 2 -    737560 c-a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217782 2 +    317179 c-t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146953 2 +    207569 c-t
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             22782 2 -     74585 A-T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mico_argentatus.k141_582562                                 6950 2 +     17804 c-g
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7723 2 -     12984 c-g
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15685 2 -     26561 c-g
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981563 2 +  93316391 C-G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181185 2 +    200668 C-T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         18979 2 -     27822 c-t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5276 2 +     27589 c-t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     49422 2 -     62432 c-a
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175370 2 +    366855 C-T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15129 2 -     63510 c-t
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mustela_putorius.JH418006.1                             14351721 2 +  14710649 A-T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116695 2 +    130748 C-C
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              25281 2 +     34575 c-t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465661 2 -  31847680 c-t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   124037 3 -    149072 CTT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           50229 2 -    132029 c-t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6325 2 -     16345 c-t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12208 2 +     22201 c-t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410545 2 -  22158432 c-t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22608 2 -     54323 c-t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195063 2 +   9404916 c-t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93631688 2 + 196305487 C-T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1077 2 +      2758 C-T
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559942 2 - 199412804 C-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448445 2 +   2017862 c-t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36111 2 +    559221 c-t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_85057                         23176 2 -     23432 C-T
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347741 2 +   1103335 C-T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468440 2 - 189151597 C-T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20990 2 -    230217 c-g
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18458316 2 -  18783137 c-g
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3969041 2 +   8748460 c-g
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   239830 2 - 183742232 C-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6297 2 +     21308 c-t
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287334 2 -  20919399 c-t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18950 2 -     27687 c-t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12086 2 +     16796 c-t
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18896 2 -     23640 c-t
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11905 2 +     78924 c-t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21796 2 +     31479 C-C
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14166 2 -     24908 C-C
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5735 2 +      7560 c-t
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61442 2 -     63152 C-T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44041 2 +     45295 c-t
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1720 2 +      5735 C-T
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             61932 2 +    207309 c-t
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3052 2 -     25401 c-t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28767 2 +     58159 c-t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29043 2 +     63561 c-t
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28806 2 +     51148 c-t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553799 2 -   4542175 c-t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28790 2 +     51125 c-t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5210 2 +     39866 c-t
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           297 2 -      9282 c-t
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39698 2 -     87950 c-t
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40091 2 -     88961 c-t
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4790 2 -     39403 c-t
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39744 2 +     87928 c-t
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4788 2 -     60166 c-t
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11724 2 -     67232 c-t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39640 2 -     90634 c-t
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41108 2 +     89403 c-t
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174057 2 - 189387572 C-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189055 2 -   9816681 c-t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24218 2 +     69807 c-t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41413 2 -     80239 c-t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980454 2 +   4620579 C-T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563044 2 -   2598838 T-G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            682 2 -      7103 T-G
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1279 2 -     11706 t-g
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5014 2 -     30655 t-g
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31339 2 +     46564 T-G
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91610 2 -     98465 T-G
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5249 2 +     35169 t-g
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48431 2 -     66298 c-t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1505 2 -     18639 A-T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5837408 2 -  28871421 c-t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533969 2 -   4952924 c-t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095867 2 +  38429054 c-g
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23606 2 +     91421 c-t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150098 2 -   7812017 c-t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4475 2 +     72585 c-t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2910053 2 +   3329780 c-t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            25439 2 +     27361 c-t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118789 2 + 195417433 C-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233047 2 -   7961872 c-t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71431 2 -    116970 c-t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                909 2 +     27962 c-t
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              922 2 +      6077 c-t
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              935 2 +      5971 c-t
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                990 2 +      5932 C-T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1136 2 -      2099 C-T
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388168 2 - 209938924 c-t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 937 2 +      5979 C-T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1321 2 -      4301 c-t
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235373 2 +   5703754 c-t
i Sapajus_apella.ctg103                                  I 9 C 0
s Sapajus_macrocephalus.k141_796559                           4963 2 +     21866 c-t
i Sapajus_macrocephalus.k141_796559                      I 9 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113105 2 +    313613 t-t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25444 2 +     58920 c-t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11939 2 -     45317 c-t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19596 2 -     42441 c-t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22278 2 -     29113 c-t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855796 2 -   1910179 T-A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3507 2 -     97271 A-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121537 2 +    196729 c-t
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387527 2 +   1523678 c-t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1564 2 -      2009 c-c
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188171 2 +    199430 c-t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102126 2 -    539355 c-t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4234 2 +      6850 A-T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4273 2 +     20590 A-T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349815 2 - 186847797 C-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16917 2 -     31044 c-t
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476245 2 -    610378 C-T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        17491 2 +     26378 c-t
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30172 2 -     78344 c-t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16812 2 +     25722 c-t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25035 2 -     62838 c-t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25152 2 +     46913 c-t
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5962 2 -     28527 c-t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26974 2 -     64340 C-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25011 2 -     63452 C-T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6453 2 +     22490 c-t
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         4064 2 +      4141 c-t
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6879 2 -     13050 c-t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252114 2 -   6242583 c-t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57846 2 +     59866 c-t
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830103 2 -   4065304 C-T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4655 2 -     70247 C-T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104333 2 -    105689 C-T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178395 2 +   5085361 a-t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22095 2 -     30710 c-t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21002 2 -    147434 c-t
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101829 2 -    112863 c-t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25665 2 -     86975 c-t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563             9928 5 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Semnopithecus_vetulus.k141_244474                          25350 0 -     48123 C
e Semnopithecus_entellus.k141_158471                         21927 0 +     27374 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Pipistrellus_pipistrellus.PipPip_scaffold_20257            46432 3 +     46691 I
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        2568 3 +      3929 I
e Myotis_lucifugus.GL429869.1                               378847 4 +   4330536 I
e Myotis_davidii.KB100139.1                                4379029 4 +   6019432 I
e Myotis_brandtii.KE162005.1                               9788617 4 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          34166 3 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39621 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6360720 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                219726 71 -    270270 I
e Loxodonta_africana.GL010049.1                           39077402 0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12574263 3 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1199  6 +     36723 A------A-TTTT
s Acinonyx_jubatus.LLWD01001279.1                           809615 11 +   1699592 aa-tttaa-ttgt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 4
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411873 11 +  29979442 aa-tttta-gttt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 4
s Allenopithecus_nigroviridis.k141_3755588                   44487  6 +     53615 a------a-tttt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40307  6 +     44087 a------a-tttt
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13011  6 -     21945 A------A-tttt
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14689  6 +     32033 A------A-tttt
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69254  6 -     84148 a------a-tttt
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41477  6 -     78289 a------a-tttt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40925  6 +     55831 a------a-tttt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39366  6 -     64179 a------a-tttt
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21009  6 -     24835 a------a-tttt
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37992  6 +     45454 a------a-tttt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43691  6 +     70886 a------a-tttt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5818  6 +     30854 a------a-tttt
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29957  6 +     42133 a------a-tttt
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173217  6 -    412891 A------A-tttt
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   47766  6 -     65372 c------a-tttt
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41512  6 +     43593 a------a-ttta
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669524  6 +   5030052 c------a-tttt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21166  6 -     23494 c------a-tttt
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6302  6 +      8415 c------a-tttt
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16354  6 -     45910 A------A-TTTT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  1523  6 -     15198 A------A-TTTT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 478 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271752  6 +  21539123 a------a-tttt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7923  6 +     48076 a------a-tttt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3057  6 -     28759 a------a-tttt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30609  6 +     44353 a------a-tttt
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45984  6 -     71267 a------a-tttt
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20040  6 -     33135 a------a-tttt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3171  6 +     11645 a------a-tttt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3172  6 -     19611 a------a-tttt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4944  6 +     28062 a------a-tttt
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40238  6 -     91139 a------a-tttt
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17764  6 +     95584 a------a-tttt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17677  6 +    119600 a------a-tttt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7169  6 +     18648 a------a-tttt
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6854  6 -     13885 a------a-tttt
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15529  6 +     17162 a------a-tttt
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450485  6 + 189096842 A------A-TTTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16778  6 -     18408 a------a-tttt
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502179 11 +  60362399 aa-tctta-tttt
i CanFam4.chr16                                          C 0 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5809 11 -     23171 aa-tctta-tttt
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 4
s Canis_lupus_dingo.QKWQ01000480.1                          219170 11 +   9314153 aa-tctta-tttt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 4
s Canis_lupus_familiaris.chr16                            41612295 11 +  59632846 aa-tctta-tttt
i Canis_lupus_familiaris.chr16                           C 0 I 4
s Canis_lupus_orion.HG994398.1                            45103865 11 -  63665305 aa-tctta-tttt
i Canis_lupus_orion.HG994398.1                           C 0 I 4
s Carlito_syrichta.NW_007259797.1                           267544  6 +    496798 G------A-TTTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               1609  6 +      5315 A------A-tttc
i Carollia_perspicillata.CarPer_scaffold_170178          I 505 C 0
s Cebuella_niveiventris.k141_592277                           2064  6 -     12580 a------a-tttt
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39950  6 +     53515 a------a-tttt
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368152  6 -  26074798 a------a-tttt
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5041  6 -     34880 a------a-tttt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64136  6 -     89041 A------A-tttt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            713  6 -      1636 g------a-tttt
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489155 11 -  27778364 aa-tttta-tttt
i Ceratotherium_simum.JH767749.1                         C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          15988 11 +     27315 aa-tttta-tttt
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 4
s Cercocebus_atys.KQ010504.1                                137650  6 -   4669795 A------A-TTTT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41390  6 +     47900 A------A-tttt
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41222  6 -     44860 a------a-tttt
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41204  6 -    148725 A------A-tttt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24266  6 -     40656 a------a-tttt
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4201  6 +     20796 a------a-tttt
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8456  6 -     17524 a------a-tttt
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24145  6 -     34525 a------a-tttt
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8855  6 -     25376 a------a-tttt
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361421  6 -  39242232 a------a-tttt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267165  6 +  21565898 A------A-tttt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28619  6 -     45857 A------A-tttt
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24410  6 -     32606 a------a-tttt
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          597  6 +      8499 a------a-tttt
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22109  6 +     70610 a------a-tttt
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18974  6 +     36323 a------a-tttt
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             27597  6 -     33796 a------a-tttt
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1784  6 -     15404 A------A-tttt
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6038  6 -     32913 a------a-tttt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16451  6 -     40346 a------a-tttt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16715  6 +    216457 a------a-tttt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16494  6 +     39636 a------a-tttt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            913  6 +      5346 a------a-tttt
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39584  6 -    112038 a------a-tttt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5156  6 +     34062 a------a-tttt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339870  6 +  18827391 A------A-tttt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6481  6 -     44032 a------a-tttt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301196  6 - 135778131 A------A-TTTT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405745  6 -   2368649 A------A-TTTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374904  6 - 200372422 a------a-tttt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5629  6 -      6605 a------a-tttt
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804346  7 +  53390261 t------gttttt
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9459  6 +     10921 a------a-tttt
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               846 11 +     87169 aa-tttta-tttt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 4
s Dasypus_novemcinctus.JH564415.1                          2107255  6 -   2246927 a------a-tttt
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289612  6 +  12879189 a------a-tttt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11861253  6 -  20541912 a------a-tttt
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661439 11 -   1390856 aa-tttta-tttt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 4
s Diceros_bicornis.DicBicMic_scaffold_5955                  136232 11 -    198055 aa-tttta-tttt
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 4
s Eidolon_helvum.AWHC01266696.1                               2827  6 +     19438 a------g-tttt
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Enhydra_lutris.KZ291758.1                               24912915 11 +  41312741 A-ctttta-attc
i Enhydra_lutris.KZ291758.1                              C 0 I 5
s Eptesicus_fuscus.JH977646.1                             12574266  1 +  14770903 ------------a
i Eptesicus_fuscus.JH977646.1                            I 3 I 218
s Equus_asinus.JREZ01000139.1                              3038400 11 -   4378816 aa-tttta-tttt
i Equus_asinus.JREZ01000139.1                            C 0 I 4
s Equus_caballus.CM000403.2                               21372334 11 +  39960074 aa-tttta-tttt
i Equus_caballus.CM000403.2                              C 0 I 4
s Equus_przewalskii.KK951119.1                              409120 11 -    498745 aa-tttta-tttt
i Equus_przewalskii.KK951119.1                           C 0 I 4
s Erythrocebus_patas.Contig38                               259428  6 +  21539334 A------A-tttt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12580  6 -     24895 A------A-TTTT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40292  6 -     70999 A------A-TTTT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84253  4 +    112731 ---------tttt
i Eulemur_coronatus.k141_384460                          I 1 C 0
s Eulemur_flavifrons.k141_433119                             40824  6 +     68309 A------A-TTTT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51149  6 -     65740 A------A-TTTT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21779  6 -     75513 A------A-TTTT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45972  6 -     97555 A------A-TTTT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2699  6 +     30972 a------a-tttt
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40422  6 -     52037 A------A-TTTT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56823  6 -    111500 A------A-TTTT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186243272 11 - 206538554 aa-tttaa-ttgt
i Felis_catus.CM001381.2                                 C 0 I 4
s Felis_catus_fca126.CM031415.1                          185113054 11 - 205367284 A-ATTTAA-TTGT
i Felis_catus_fca126.CM031415.1                          C 0 I 4
s Felis_nigripes.FelNig_flattened_line_31944                 24402 11 -     30238 aa-tttaa-ttgt
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 4
s Galago_moholi.ctg3793                                     119904  6 -    137831 A------A-TTGT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3444  6 +     22493 A------A-TTGT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16913  6 +     32986 A------A-TTGT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15775  6 +     18121 a------a-tttt
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1553  6 -      8343 a------a-tttt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251053  6 - 186649187 A------A-tttt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12509  6 -     40692 A------A-TTTT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33910  6 +     49394 a------a-tttt
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58779  6 -     66874 A------A-TTTT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7652  6 -     42923 a------a-tttt
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14652  6 -     53142 A------A-TTTT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27377 12 -    327341 aaatttta-tttt
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 4
s Hipposideros_armiger.JXIK01000431.1                      1546720  6 -   1711038 a------a-tttt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               46039  6 +     49977 A------A-TTTT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138946  6 -    630532 a------a-tttt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65836 11 +     83186 A-ATTTTA-TTTT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 4
s Hylobates_agilis.k141_1155965                               1980  6 +     12352 a------a-tttt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9163  6 +     55766 a------a-tttt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048501  6 + 191637585 a------a-tttt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797833  6 +  11177569 a------a-tttt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     664  6 -      1527 a------a-tttt
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40299  6 +    110728 a------a-tttt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757300  6 +  30322482 a------a-tttt
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         993  6 -     13097 a------a-tttt
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            944  6 +      5940 a------a-tttt
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         575  6 -      5717 a------a-tttt
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7202  6 -     11567 a------a-tttt
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8583  6 -     12945 a------a-tttt
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5957  6 +     29618 a------a-tttt
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5954  6 +     31569 a------a-tttt
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5966  6 +     24756 a------a-tttt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5958  6 +     16388 a------a-tttt
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810269 11 -   3914936 aa-tttta-gttt
i Leptonychotes_weddellii.KB714746.1                     C 0 I 4
s Lophocebus_aterrimus.ctg367                               329605  6 -   1826925 a------a-tttt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2915  6 +     19643 A------A-TCTT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036574  6 -   6120653 A------A-TCTT
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611450 11 +  59628241 aa-tctta-tttt
i Lycaon_pictus.CM007581.1                               C 0 I 4
s Macaca_arctoides.k141_1757516                              41887  6 -     61512 a------a-tttt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369515  6 -  60120075 a------a-tttt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21835  6 +     30207 a------a-tttt
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18938  6 -     24934 a------a-tttt
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21721  6 +     30527 a------a-tttt
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32911  6 -     50087 a------a-tttt
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42649  6 +     51645 a------a-tttt
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411223  6 - 187317192 A------A-TTTT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396106  6 +  25927173 A------A-TTTT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45237  6 -     62418 a------a-tttt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21925  6 +     24253 a------a-tttt
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41682  6 +     59329 a------a-tttt
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267514  6 +    668171 a------a-tttt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18860  6 +     21031 a------a-tttt
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32593  6 +     33478 a------a-tttt
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318988  6 +  24302211 a------a-tttt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353820  6 -    752769 a------a-tttt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670489 11 -    737560 aa-ttttg-tttt
i Manis_javanica.JSZB01003497.1                          C 0 I 4
s Manis_pentadactyla.KN006162.1                             217784 11 +    317179 aa-ttttg-tttt
i Manis_pentadactyla.KN006162.1                          C 0 I 4
s Megaderma_lyra.MegLyr_scaffold_4542                       146955  6 +    207569 a------a-tttt
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             22784 11 -     74585 A-ctttta-attt
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 5
s Mico_argentatus.k141_582562                                 6952  6 +     17804 a------a-tttt
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7725  6 -     12984 a------a-tttt
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15687  6 -     26561 a------a-tttt
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981565  6 +  93316391 A------A-TTTT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181187  6 +    200668 A------A-TTTT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000308.1                     492213  1 -   1897963 ------------a
i Miniopterus_natalensis.LDJU01000308.1                  n 0 I 220
s Miniopterus_schreibersii.MinSch_scaffold_3531             131840  1 +    183988 ------------a
i Miniopterus_schreibersii.MinSch_scaffold_3531          n 0 I 246
s Miopithecus_ogouensis.k141_1534655                         18981  6 -     27822 a------a-tttt
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5278 11 +     27589 aa-tttta-gttt
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 4
s Mirza_zaza.k141_766280                                     49424  6 -     62432 a------a-tttt
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175372  6 +    366855 A------A-TTTT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15131 12 -     63510 aaatttta-tttt
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 4
s Murina_feae.MurFea_scaffold_17764                          34169  1 +     47283 ------------T
i Murina_feae.MurFea_scaffold_17764                      I 3 I 217
s Mustela_putorius.JH418006.1                             14351723 11 +  14710649 A-ctttta-attc
i Mustela_putorius.JH418006.1                            C 0 I 5
s Myotis_brandtii.KE162005.1                               9788621  1 +  10118263 ------------t
i Myotis_brandtii.KE162005.1                             I 4 I 460
s Myotis_davidii.KB100139.1                                4379033  1 +   6019432 ------------t
i Myotis_davidii.KB100139.1                              I 4 I 4006
s Myotis_lucifugus.GL429869.1                               378851  1 +   4330536 ------------t
i Myotis_lucifugus.GL429869.1                            I 4 I 458
s Myotis_myotis.MyoMyo_scaffold_185951                        2571  1 +      3929 ------------t
i Myotis_myotis.MyoMyo_scaffold_185951                   I 3 I 438
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116697  6 +    130748 A------A-TTTT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              25283  6 +     34575 a------a-tttt
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465663 11 -  31847680 aa-tttta-gttt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 4
s Noctilio_leporinus.NocLep_scaffold_7894                   124040  6 -    149072 A------A-TTTT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           50231  6 -    132029 a------a-tttt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6327  6 -     16345 a------a-tttt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12210  6 +     22201 a------a-tttt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410547  6 -  22158432 a------a-tttt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22610  6 -     54323 a------a-tttt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195065 11 +   9404916 aa-tctta-tttt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 4
s Nycticebus_bengalensis.LG01                             93631690  6 + 196305487 A------A-TCTT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1079  6 +      2758 A------A-TCTT
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559944  6 - 199412804 A------A-TCTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448447 11 +   2017862 aa-tttta-gttt
i Odobenus_rosmarus.KB229312.1                           C 0 I 4
s Otocyon_megalotis.JAEUCK010005147.1                        36113 11 +    559221 aa-tctta-tttt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 4
s Otolemur_crassicaudatus.k141_85057                         23178  6 -     23432 A------A-TTGT
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347743  6 +   1103335 A------A-TTGT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468442  6 - 189151597 A------A-TTTT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   20992 11 -    230217 aa-tttaa-ttgt
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 4
s Panthera_pardus.KV860321.1                              18458318 11 -  18783137 aa-tttaa-ttgt
i Panthera_pardus.KV860321.1                             C 0 I 4
s Panthera_tigris.KE722367.1                               3969043 11 +   8748460 aa-tttaa-ttgt
i Panthera_tigris.KE722367.1                             C 0 I 4
s Papio_anubis.CM001495.2                                   239832  6 - 183742232 A------A-TTTT
i Papio_anubis.CM001495.2                                C 0 I 1
s Papio_cynocephalus.k141_1507553                             6299  6 +     21308 a------a-tttt
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287336  6 -  20919399 a------a-tttt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18952  6 -     27687 a------a-tttt
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12088  6 +     16796 a------a-tttt
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18898  6 -     23640 a------a-tttt
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11907 11 +     78924 agctt-aa-tttt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 4
s Perodicticus_ibeanus.k141_1921260                          21798  6 +     31479 A------A-TTTT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14168  6 -     24908 A------A-TTTT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5737  6 +      7560 a------a-tttt
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61444  6 -     63152 A------A-TTTT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44043  6 +     45295 a------a-tttt
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1722  6 +      5735 A------A-TTTT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46435  1 +     46691 ------------a
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        I 3 I 221
s Pithecia_albicans.k141_1239476                             61934  6 +    207309 a------a-tttt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3054  6 -     25401 a------a-tttt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28769  6 +     58159 a------a-tttt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29045  6 +     63561 a------a-tttt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28808  6 +     51148 a------a-tttt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553801  6 -   4542175 a------a-tttt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28792  6 +     51125 a------a-tttt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5212  6 +     39866 a------a-tttt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           299  6 -      9282 a------a-tttt
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39700  6 -     87950 a------a-tttt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40093  6 -     88961 a------a-tttt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4792  6 -     39403 a------a-tttt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39746  6 +     87928 a------a-tttt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4790  6 -     60166 a------a-tttt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11726  6 -     67232 a------a-tttt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39642  6 -     90634 a------a-tttt
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41110  6 +     89403 a------a-tttt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174059  6 - 189387572 A------A-TTTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189057  6 -   9816681 a------a-tttt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24220  6 +     69807 a------a-tttt
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41415  6 -     80239 a------a-tttt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980456  6 +   4620579 A------A-TTTT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563046  6 -   2598838 A------A-TTTT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            684  6 -      7103 A------A-tttt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1281  6 -     11706 a------a-tttt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5016  6 -     30655 a------a-tttt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31341  6 +     46564 A------A-tttt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91612  6 -     98465 A------A-tttt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5251  6 +     35169 a------a-tttt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48433  6 -     66298 a------a-tttt
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1507 11 -     18639 A-ctttta-tttc
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 5
s Pteropus_alecto.KB030862.1                               5837410  6 -  28871421 a------g-tttt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3533971  6 -   4952924 a------g-tttt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095869 11 +  38429054 aa-tttaa-ttgt
i Puma_concolor.QAVW01001104.1                           C 0 I 4
s Pygathrix_cinerea.k141_1153803                             23608  6 +     91421 a------a-tttt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150100  6 -   7812017 a------a-tttt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4477  6 +     72585 a------a-tttt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2910055  9 +   3329780 aaa---aa-tttt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            25441  6 +     27361 a------a-tttt
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118791  6 + 195417433 A------A-TTTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233049  6 -   7961872 a------a-tttt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71433  6 -    116970 a------g-tttt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                911  6 +     27962 a------a-tttt
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              924  6 +      6077 a------a-tttt
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              937  6 +      5971 a------a-tttt
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                992  6 +      5932 A------A-TTTT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1138  6 -      2099 A------A-TTTT
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388170  6 - 209938924 a------a-tttt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 939  6 +      5979 A------A-TTTT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1323  6 -      4301 a------a-tttt
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235375  6 +   5703754 a------a-tttt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4965  6 +     21866 a------a-tttt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113107  7 +    313613 t------gttttt
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21927  5 +     27374 -------a-tttt
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25446  6 +     58920 a------a-tttt
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11941  6 -     45317 a------a-tttt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19598  6 -     42441 a------a-tttt
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22280  6 -     29113 a------a-tttt
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25350  5 -     48123 -------a-tttt
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855798  6 -   1910179 A------A-TTTT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3509 11 -     97271 A-ATTTTA-AGTT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 4
s Suricata_suricatta.SurSur_flattened_line_6629             121539 11 +    196729 aa-tttta-tttt
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 4
s Symphalangus_syndactylus.tarseq_199                       387529  6 +   1523678 a------a-tttt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1566  6 -      2009 a------a-tttt
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188173 11 +    199430 aa-tttta-tttt
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 4
s Tapirus_terrestris.TapTer_scaffold_755                    102128 11 -    539355 aa-tttta-tttt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 4
s Tarsius_lariang.k141_1780720                                4236  6 +      6850 A------A-TTTT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4275  6 +     20590 A------A-TTTT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349817  6 - 186847797 A------A-TTTT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16919  6 -     31044 a------a-tttt
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476247  6 -    610378 A------A-TTTT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        17493  6 +     26378 a------a-tttt
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30174  6 -     78344 a------a-tttt
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16814  6 +     25722 a------a-tttt
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25037  6 -     62838 a------a-tttt
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25154  6 +     46913 a------a-tttt
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5964  6 -     28527 a------a-tttt
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26976  6 -     64340 A------A-TTTT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25013  6 -     63452 A------A-TTTT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6455  6 +     22490 a------a-tttt
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         4066  6 +      4141 a------a-tttt
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6881  6 -     13050 a------a-tttt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252116  6 -   6242583 a------a-tttt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57848  6 +     59866 a------a-tttt
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830105  6 -   4065304 A------G-TTTT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4657  6 -     70247 A------A-TTTT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104335  7 -    105689 T------GTTTTT
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178397 11 +   5085361 aa-tttta-gttt
i Ursus_maritimus.KK499267.1                             C 0 I 4
s Varecia_rubra.k141_787544                                  22097  6 -     30710 a------a-tttt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21004  6 -    147434 a------a-tttt
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101831 11 -    112863 aa-tctta-tttt
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_17732         25667 11 -     86975 aa-tttta-gttt
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 4
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563             9928  5 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                219726 71 -    270270 I
e Loxodonta_africana.GL010049.1                           39077402  0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1205 9 +     36723 ATTCTGGAA
s Acinonyx_jubatus.LLWD01001279.1                           809630 1 +   1699592 a--------
i Acinonyx_jubatus.LLWD01001279.1                        I 4 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411888 1 +  29979442 a--------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 4 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44493 9 +     53615 tttctggaa
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40313 9 +     44087 attctggaa
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13017 9 -     21945 attctggaa
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14695 9 +     32033 attctggaa
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69260 9 -     84148 attctggaa
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41483 9 -     78289 attctggaa
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40931 9 +     55831 attctggaa
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39372 9 -     64179 attctggaa
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21015 9 -     24835 attctggaa
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             37998 9 +     45454 attctggaa
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43697 9 +     70886 attctggaa
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5824 9 +     30854 attctggaa
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29963 9 +     42133 attctggaa
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173223 1 -    412891 a--------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 8
s Aotus_azarae.k141_118258                                   47772 9 -     65372 attctggaa
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41518 8 +     43593 a-tctggaa
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669530 9 +   5030052 attctggaa
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21172 9 -     23494 attctggaa
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6308 9 +      8415 attctggaa
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16360 9 -     45910 ATTCTGGAA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  1529 1 -     15198 G--------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 8
s Ateles_geoffroyi_b.tarseq_1536                               271758 9 +  21539123 attctggaa
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7929 9 +     48076 attctggaa
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3063 9 -     28759 attctggaa
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30615 9 +     44353 attctggaa
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45990 9 -     71267 attctggaa
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20046 9 -     33135 attctggaa
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3177 9 +     11645 atcctggaa
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3178 9 -     19611 atcctggaa
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4950 9 +     28062 attctggaa
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40244 9 -     91139 attctggaa
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17770 9 +     95584 attctggaa
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17683 9 +    119600 attctggaa
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7175 9 +     18648 attctggaa
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6860 9 -     13885 attctggaa
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15535 9 +     17162 attctggaa
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450491 9 + 189096842 ATTCTGGAA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16784 9 -     18408 attctggaa
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502194 1 +  60362399 a--------
i CanFam4.chr16                                          I 4 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5824 1 -     23171 a--------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 4 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219185 1 +   9314153 a--------
i Canis_lupus_dingo.QKWQ01000480.1                       I 4 C 0
s Canis_lupus_familiaris.chr16                            41612310 1 +  59632846 a--------
i Canis_lupus_familiaris.chr16                           I 4 C 0
s Canis_lupus_orion.HG994398.1                            45103880 1 -  63665305 a--------
i Canis_lupus_orion.HG994398.1                           I 4 C 0
s Carlito_syrichta.NW_007259797.1                           267550 9 +    496798 ATCCTGGAA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               1615 1 +      5315 a--------
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 8
s Cebuella_niveiventris.k141_592277                           2070 9 -     12580 attctggaa
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39956 9 +     53515 attctggaa
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368158 9 -  26074798 attctggaa
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5047 9 -     34880 attctggaa
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64142 9 -     89041 attctggaa
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            719 9 -      1636 atcctggaa
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489170 1 -  27778364 a--------
i Ceratotherium_simum.JH767749.1                         I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16003 1 +     27315 a--------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 4 C 0
s Cercocebus_atys.KQ010504.1                                137656 9 -   4669795 ATTCTGGAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41396 9 +     47900 attctggaa
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41228 9 -     44860 attctggaa
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41210 9 -    148725 attctggaa
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24272 9 -     40656 attctggaa
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4207 9 +     20796 attctggaa
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8462 9 -     17524 attctggaa
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24151 9 -     34525 attctgaaa
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8861 9 -     25376 attctggaa
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361427 9 -  39242232 attctggaa
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267171 9 +  21565898 attctggaa
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28625 9 -     45857 attctggaa
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24416 9 -     32606 attctggaa
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          603 9 +      8499 attctggaa
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22115 9 +     70610 attctggaa
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18980 9 +     36323 attctggaa
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             27603 9 -     33796 atcctggaa
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1790 9 -     15404 accctggaa
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6044 9 -     32913 attctggaa
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16457 9 -     40346 attctggaa
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16721 9 +    216457 attctggaa
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16500 9 +     39636 attctggaa
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            919 9 +      5346 attctggaa
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39590 9 -    112038 attctggaa
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5162 9 +     34062 attctggaa
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339876 9 +  18827391 attctggaa
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6487 9 -     44032 attctggaa
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301202 9 - 135778131 ATTCTGGAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405751 9 -   2368649 ATTCTGGAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374910 9 - 200372422 attctggaa
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5635 9 -      6605 attctggaa
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804353 1 +  53390261 g--------
i Condylura_cristata.JH655891.1                          C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9465 1 +     10921 A--------
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 I 8
s Cryptoprocta_ferox.CryFer_flattened_line_16129               861 1 +     87169 a--------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 4 C 0
s Dasypus_novemcinctus.JH564415.1                          2107261 1 -   2246927 a--------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 8
s Daubentonia_madagascariensis.ctg71                        289618 9 +  12879189 attctggga
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11861259 1 -  20541912 a--------
i Desmodus_rotundus.KZ672289.1                           C 0 I 8
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661454 1 -   1390856 a--------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 4 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136247 1 -    198055 a--------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 4 C 0
s Eidolon_helvum.AWHC01266696.1                               2833 1 +     19438 a--------
i Eidolon_helvum.AWHC01266696.1                          C 0 I 8
s Eptesicus_fuscus.JH977646.1                             12574485 1 +  14770903 g--------
i Eptesicus_fuscus.JH977646.1                            I 218 I 153
s Equus_asinus.JREZ01000139.1                              3038415 1 -   4378816 a--------
i Equus_asinus.JREZ01000139.1                            I 4 C 0
s Equus_caballus.CM000403.2                               21372349 1 +  39960074 a--------
i Equus_caballus.CM000403.2                              I 4 C 0
s Equus_przewalskii.KK951119.1                              409135 1 -    498745 a--------
i Equus_przewalskii.KK951119.1                           I 4 C 0
s Erythrocebus_patas.Contig38                               259434 9 +  21539334 attctggaa
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12586 9 -     24895 ATCCTGGAA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40298 9 -     70999 ATCCTGGAA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84257 9 +    112731 atcctggaa
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40830 9 +     68309 ATCCTGGAA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51155 9 -     65740 ATCCTGGAA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21785 9 -     75513 ATCCTGGAA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45978 9 -     97555 ATCCTGGAA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2705 9 +     30972 atcctggaa
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40428 9 -     52037 ATCCTGGAA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56829 9 -    111500 ATCCTGGAA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186243287 1 - 206538554 a--------
i Felis_catus.CM001381.2                                 I 4 C 0
s Felis_catus_fca126.CM031415.1                          185113069 1 - 205367284 a--------
i Felis_catus_fca126.CM031415.1                          I 4 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24417 1 -     30238 a--------
i Felis_nigripes.FelNig_flattened_line_31944             I 4 C 0
s Galago_moholi.ctg3793                                     119910 9 -    137831 ATTCTGTAA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3450 9 +     22493 ATTCTGTAA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16919 9 +     32986 ATTCTAGAA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15781 9 +     18121 attttggaa
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1559 9 -      8343 attctggaa
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251059 9 - 186649187 attctggaa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12515 9 -     40692 ATCCTGGAA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33916 9 +     49394 atcctggaa
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58785 9 -     66874 ATCCTGGAA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7658 9 -     42923 atcctggaa
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14658 9 -     53142 ATCCTGGAA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27393 1 -    327341 a--------
i Helogale_parvula.HelPar_flattened_line_2585            I 4 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546726 1 -   1711038 a--------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 8
s Hipposideros_galeritus.HipGal_scaffold_23202               46045 1 +     49977 A--------
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 8
s Hoolock_leuconedys.ctg274                                    138952 9 -    630532 attctggaa
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65851 1 +     83186 A--------
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 4 C 0
s Hylobates_agilis.k141_1155965                               1986 9 +     12352 attctggaa
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9169 9 +     55766 attctggaa
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048507 9 + 191637585 attctggaa
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797839 9 +  11177569 attctggaa
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     670 9 -      1527 atcctggaa
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40305 9 +    110728 attctggag
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757306 9 +  30322482 atcctggaa
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                         999 9 -     13097 attctggaa
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            950 9 +      5940 attctggaa
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         581 9 -      5717 attctggaa
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7208 9 -     11567 attctggaa
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8589 9 -     12945 attctggaa
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5963 9 +     29618 atcctggaa
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5960 9 +     31569 atcctggaa
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5972 9 +     24756 atcctagaa
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5964 9 +     16388 atcctggaa
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810284 1 -   3914936 a--------
i Leptonychotes_weddellii.KB714746.1                     I 4 C 0
s Lophocebus_aterrimus.ctg367                               329611 9 -   1826925 attctggaa
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2921 9 +     19643 ATTCTGGAA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036580 9 -   6120653 ATTCTGGAA
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611465 1 +  59628241 a--------
i Lycaon_pictus.CM007581.1                               I 4 C 0
s Macaca_arctoides.k141_1757516                              41893 9 -     61512 attctggaa
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369521 9 -  60120075 attctggaa
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21841 9 +     30207 attctggaa
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18944 9 -     24934 attctggaa
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21727 9 +     30527 attctggaa
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32917 9 -     50087 attctggaa
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42655 9 +     51645 attctggaa
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411229 9 - 187317192 ATTCTGGAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396112 9 +  25927173 ATTCTGGAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45243 9 -     62418 attctggaa
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21931 9 +     24253 attctggaa
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41688 9 +     59329 attctggaa
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267520 9 +    668171 attctggaa
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18866 9 +     21031 attctggaa
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32599 9 +     33478 attctggaa
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        318994 9 +  24302211 attctggaa
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353826 9 -    752769 attctggaa
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670504 1 -    737560 a--------
i Manis_javanica.JSZB01003497.1                          I 4 C 0
s Manis_pentadactyla.KN006162.1                             217799 1 +    317179 a--------
i Manis_pentadactyla.KN006162.1                          I 4 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146961 1 +    207569 a--------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 8
s Mico_argentatus.k141_582562                                 6958 9 +     17804 attctggaa
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7731 9 -     12984 attctggaa
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15693 9 -     26561 attctggaa
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981571 9 +  93316391 ATCCTGGAA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181193 1 +    200668 A--------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 8
s Miniopterus_natalensis.LDJU01000308.1                     492434 1 -   1897963 g--------
i Miniopterus_natalensis.LDJU01000308.1                  I 220 I 1635
s Miniopterus_schreibersii.MinSch_scaffold_3531             132087 1 +    183988 g--------
i Miniopterus_schreibersii.MinSch_scaffold_3531          I 246 I 1417
s Miopithecus_ogouensis.k141_1534655                         18987 9 -     27822 attctggaa
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5293 1 +     27589 a--------
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 4 C 0
s Mirza_zaza.k141_766280                                     49430 9 -     62432 atcctggaa
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175378 1 +    366855 A--------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 8
s Mungos_mungo.MunMun_flattened_line_18455                   15147 1 -     63510 a--------
i Mungos_mungo.MunMun_flattened_line_18455               I 4 C 0
s Murina_feae.MurFea_scaffold_17764                          34387 1 +     47283 g--------
i Murina_feae.MurFea_scaffold_17764                      I 217 I 155
s Myotis_davidii.KB100139.1                                4383040 1 +   6019432 g--------
i Myotis_davidii.KB100139.1                              I 4006 I 137
s Myotis_myotis.MyoMyo_scaffold_185951                        3010 1 +      3929 g--------
i Myotis_myotis.MyoMyo_scaffold_185951                   I 438 I 164
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116703 1 +    130748 A--------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 7
s Nasalis_larvatus.k141_1350636                              25289 9 +     34575 attctggaa
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465678 1 -  31847680 a--------
i Neomonachus_schauinslandi.NINY01007730.1               I 4 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   124046 1 -    149072 A--------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 8
s Nomascus_annamensis.k141_1771965                           50237 9 -    132029 attctggaa
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6333 9 -     16345 attctggaa
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12216 9 +     22201 attctggaa
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410553 9 -  22158432 attctggaa
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22616 9 -     54323 attctggaa
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195080 1 +   9404916 a--------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 4 C 0
s Nycticebus_bengalensis.LG01                             93631696 9 + 196305487 ATTCTGGAA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1085 9 +      2758 ATTCTGGAA
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559950 9 - 199412804 ATTCTGGAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448462 1 +   2017862 a--------
i Odobenus_rosmarus.KB229312.1                           I 4 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36128 1 +    559221 a--------
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 C 0
s Otolemur_crassicaudatus.k141_85057                         23184 9 -     23432 ATTCTGGAA
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347749 9 +   1103335 ATTCTGGAA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468448 9 - 189151597 ATTCTGGAA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21007 1 -    230217 a--------
i Panthera_onca.PanOnc_flattened_line_3271               I 4 C 0
s Panthera_pardus.KV860321.1                              18458333 1 -  18783137 a--------
i Panthera_pardus.KV860321.1                             I 4 C 0
s Panthera_tigris.KE722367.1                               3969058 1 +   8748460 a--------
i Panthera_tigris.KE722367.1                             I 4 C 0
s Papio_anubis.CM001495.2                                   239839 9 - 183742232 ATTCTGGAA
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_1507553                             6305 9 +     21308 attctggaa
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287342 9 -  20919399 attctggaa
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18958 9 -     27687 attctggaa
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12094 9 +     16796 attctggaa
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18904 9 -     23640 attctggaa
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11922 1 +     78924 a--------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Perodicticus_ibeanus.k141_1921260                          21804 9 +     31479 ATTCTGAAA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14174 9 -     24908 ATTCTGAAA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5743 9 +      7560 attctggaa
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61450 9 -     63152 ATTCTGGAA
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44049 9 +     45295 attctggaa
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1728 9 +      5735 ATTCTGGAA
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_20257            46657 1 +     46691 g--------
i Pipistrellus_pipistrellus.PipPip_scaffold_20257        I 221 N 0
s Pithecia_albicans.k141_1239476                             61940 9 +    207309 attctggaa
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3060 9 -     25401 attctggaa
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28775 9 +     58159 attctggaa
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29051 9 +     63561 attctggaa
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28814 9 +     51148 attctggaa
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553807 9 -   4542175 attctggaa
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28798 9 +     51125 attctggaa
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5218 9 +     39866 attctggaa
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           305 9 -      9282 attctggaa
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39706 9 -     87950 attctggaa
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40099 9 -     88961 attctggaa
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4798 9 -     39403 attctggaa
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39752 9 +     87928 attctggaa
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4796 9 -     60166 attctggaa
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11732 9 -     67232 attctggaa
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39648 9 -     90634 attctggaa
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41116 9 +     89403 attctggaa
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174065 9 - 189387572 ATTCTGGAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189063 9 -   9816681 attctggaa
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24226 9 +     69807 attctggaa
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41421 9 -     80239 attctggaa
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980462 9 +   4620579 ATCCTGGAA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563052 9 -   2598838 ATCCTGGAA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            690 9 -      7103 atcctggaa
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1287 9 -     11706 atcctggaa
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5022 9 -     30655 atcctggaa
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31347 9 +     46564 atcctggaa
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91618 9 -     98465 atcctggaa
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5257 9 +     35169 atcctggaa
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48439 1 -     66298 a--------
i Pteronotus_parnellii.KE847780.1                        C 0 I 8
s Pteropus_alecto.KB030862.1                               5837416 1 -  28871421 a--------
i Pteropus_alecto.KB030862.1                             C 0 I 8
s Pteropus_vampyrus.KN525825.1                             3533977 1 -   4952924 a--------
i Pteropus_vampyrus.KN525825.1                           C 0 I 8
s Puma_concolor.QAVW01001104.1                            18095884 1 +  38429054 a--------
i Puma_concolor.QAVW01001104.1                           I 4 C 0
s Pygathrix_cinerea.k141_1153803                             23614 9 +     91421 attctggaa
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150106 9 -   7812017 attctggaa
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4483 9 +     72585 attctggaa
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2910064 1 +   3329780 a--------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 8
s Rhinopithecus_bieti.k119_221883                            25447 9 +     27361 attctagaa
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118797 9 + 195417433 ATTCTAGAA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233055 9 -   7961872 attctagaa
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71439 1 -    116970 a--------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 8
s Saguinus_bicolor.k141_1429097                                917 9 +     27962 attctggaa
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              930 9 +      6077 attctggaa
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              943 9 +      5971 attctggaa
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                                998 9 +      5932 ATTCTGGAA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1144 9 -      2099 ATTCTGGAA
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388176 9 - 209938924 attctggaa
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 945 9 +      5979 ATTCTGGAA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1329 9 -      4301 attctggaa
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235381 9 +   5703754 attctggaa
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4971 9 +     21866 attctggaa
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113114 1 +    313613 g--------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 2
s Semnopithecus_entellus.k141_158471                         21932 9 +     27374 attctggaa
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25452 9 +     58920 attctggaa
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11947 9 -     45317 attctggaa
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19604 9 -     42441 attctggaa
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22286 9 -     29113 attctggaa
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25355 9 -     48123 attctggaa
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855804 1 -   1910179 a--------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121554 1 +    196729 a--------
i Suricata_suricatta.SurSur_flattened_line_6629          I 4 C 0
s Symphalangus_syndactylus.tarseq_199                       387535 9 +   1523678 attctggaa
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1572 1 -      2009 a--------
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 I 7
s Tapirus_indicus.TapInd_scaffold_7432                      188188 1 +    199430 a--------
i Tapirus_indicus.TapInd_scaffold_7432                   I 4 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102143 1 -    539355 a--------
i Tapirus_terrestris.TapTer_scaffold_755                 I 4 C 0
s Tarsius_lariang.k141_1780720                                4242 9 +      6850 ATCCTGGAA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4281 9 +     20590 ATCCTGGAA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349823 9 - 186847797 ATTCTGGAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16925 1 -     31044 a--------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 8
s Tonatia_saurophila.TonSau_scaffold_294                    476253 1 -    610378 A--------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 8
s Trachypithecus_auratus.k141_1189070                        17499 9 +     26378 attctggaa
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30180 9 -     78344 attctggaa
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16820 9 +     25722 attctggaa
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25043 9 -     62838 attctggaa
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25160 9 +     46913 attgtggaa
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5970 9 -     28527 attctggaa
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26982 9 -     64340 ATTCTGGAA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25019 9 -     63452 ATTCTGGAA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6461 9 +     22490 attctggaa
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         4072 9 +      4141 attctggaa
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6887 9 -     13050 attctggaa
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252122 9 -   6242583 attctggaa
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57854 9 +     59866 attgtggaa
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830111 9 -   4065304 ATTTTGGAA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4663 9 -     70247 ATTTTGGAA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104342 1 -    105689 A--------
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 2
s Ursus_maritimus.KK499267.1                                178412 1 +   5085361 a--------
i Ursus_maritimus.KK499267.1                             I 4 C 0
s Varecia_rubra.k141_787544                                  22103 9 -     30710 atcctggaa
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21010 9 -    147434 atcctggaa
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101846 1 -    112863 a--------
i Vulpes_lagopus.VulLag_flattened_line_12041             I 4 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25682 1 -     86975 a--------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 4 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563             9928 5 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              3520 4 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          1518 5 -     18639 I
e Mustela_putorius.JH418006.1                             14351734 5 +  14710649 I
e Mellivora_capensis.MelCap_flattened_line_19308             22795 5 -     74585 I
e Enhydra_lutris.KZ291758.1                               24912926 5 +  41312741 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tadarida_brasiliensis.TadBra_scaffold_547924                 570 82 -      1028 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myotis_lucifugus.GL429869.1                               378852 458 +   4330536 I
e Myotis_brandtii.KE162005.1                               9788622 460 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                219726 71 -    270270 I
e Loxodonta_africana.GL010049.1                           39077402 0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1214 15 +     36723 AAG-TTT-----TGTT------------------GAAT-----C
s Acinonyx_jubatus.LLWD01001279.1                           809631 19 +   1699592 agt-t-t-----tctt------------------gaatcagttc
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411889 19 +  29979442 agt-t-t-----tctt------------------gaatcagttc
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44502 15 +     53615 aag-ttt-----tctt------------------gaat-----c
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40322 15 +     44087 aag-ttt-----tctt------------------gaat-----c
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13026 15 -     21945 aag-ttt-----tctt------------------gaat-----c
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14704 15 +     32033 aag-ttt-----tctt------------------gaat-----c
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69269 15 -     84148 aag-ttt-----tttt------------------gaat-----c
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41492 15 -     78289 aag-ttt-----tttt------------------gaat-----c
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40940 15 +     55831 aag-ttt-----tttt------------------gaat-----c
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39381 15 -     64179 aag-ttt-----tttt------------------gaat-----c
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21024 15 -     24835 aag-ttt-----tttt------------------gaat-----c
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38007 15 +     45454 aag-ttt-----tttt------------------gaat-----c
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43706 15 +     70886 aag-ttt-----tttt------------------gaat-----c
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5833 15 +     30854 aag-ttt-----tttt------------------gaat-----c
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             29972 15 +     42133 aag-ttt-----tttt------------------gaat-----c
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173232 15 -    412891 atg-t-t----ttctt------------------gaat-----t
i Anoura_caudifer.AnoCau_scaffold_1412                   I 8 C 0
s Aotus_azarae.k141_118258                                   47781 15 -     65372 aag-ttt-----tctt------------------gaat-----c
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41526 15 +     43593 aag-ttt-----tctt------------------gaat-----c
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669539 15 +   5030052 AAG-TTT-----TCTT------------------GAAT-----C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21181 15 -     23494 aag-ttt-----tctt------------------gaat-----c
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6317 15 +      8415 aag-ttt-----tctt------------------gaat-----c
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16369 15 -     45910 AAC-TAT-----TATT------------------GAAT-----C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  1538 15 -     15198 AAG-T-TT----TCTT------------------GAAT-----T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 8 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271767 15 +  21539123 aag-ttt-----tctt------------------gaat-----c
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7938 15 +     48076 aag-ttt-----tctt------------------gaat-----c
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3072 15 -     28759 aag-ttt-----tctt------------------gaat-----c
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30624 15 +     44353 aag-ttt-----tctt------------------gaat-----c
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              45999 15 -     71267 aag-ttt-----tctt------------------gaat-----c
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20055 15 -     33135 aag-ttt-----tctt------------------gaat-----c
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3186 15 +     11645 aac-ttt-----tctt------------------gaat-----c
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3187 15 -     19611 aac-ttt-----tctt------------------gaat-----c
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4959 15 +     28062 aag-gtt-----tctt------------------gaat-----c
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40253 15 -     91139 aag-att-----tctt------------------gaat-----c
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17779 15 +     95584 aag-gtt-----tctt------------------gaat-----c
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17692 15 +    119600 aag-gtt-----tctt------------------gaat-----c
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7184 15 +     18648 aag-ttt-----tctt------------------gaat-----c
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6869 15 -     13885 aag-ttt-----tctt------------------gaat-----c
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15544 15 +     17162 aag-ttt-----tctt------------------gaat-----c
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450500 15 + 189096842 AAG-TTT-----TCTT------------------GAAT-----C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16793 15 -     18408 aag-ttt-----tctt------------------gaat-----c
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502195 19 +  60362399 agt-t-t-----tctt------------------gaattagctc
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5825 19 -     23171 agt-t-t-----tctt------------------gaattagctc
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219186 19 +   9314153 agt-t-t-----tctt------------------gaattagctc
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41612311 19 +  59632846 agt-t-t-----tctt------------------gaattagctc
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45103881 19 -  63665305 agt-t-t-----tctt------------------gaattagctc
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267559 15 +    496798 AAG-TAT-----TTTT------------------GAAT-----C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               1624 15 +      5315 aag-t-t----ttctt------------------gaat-----t
i Carollia_perspicillata.CarPer_scaffold_170178          I 8 C 0
s Cebuella_niveiventris.k141_592277                           2079 15 -     12580 aag-ttt-----tctt------------------gaat-----c
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39965 15 +     53515 aag-ttt-----tctt------------------gaat-----c
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368167 15 -  26074798 aag-ttt-----tgtt------------------gaat-----c
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5056 15 -     34880 aag-ttt-----tgtt------------------gaat-----c
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64151 15 -     89041 aag-ttt-----tgtt------------------gaat-----c
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            728 15 -      1636 AAG-TAT-----TTTT------------------GAAT-----C
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489171 14 -  27778364 agt-t-t-----tctt------------------gaat-----c
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16004 14 +     27315 agt-t-t-----tctt------------------gaat-----c
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137665 15 -   4669795 AAG-TTT-----TCTT------------------GAAT-----C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41405 15 +     47900 aag-ttt-----tctt------------------gaat-----c
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41237 15 -     44860 aag-ttt-----tctt------------------gaat-----c
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41219 15 -    148725 aag-ttt-----tctt------------------gaat-----c
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24281 15 -     40656 aag-ttt-----tctt------------------gaat-----c
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4216 15 +     20796 aag-ttt-----tctt------------------gaat-----c
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8471 15 -     17524 aag-ttt-----tctt------------------gaat-----c
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24160 15 -     34525 aag-ttt-----tctt------------------gaat-----c
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8870 15 -     25376 aag-ttt-----tctt------------------gaat-----c
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361436 15 -  39242232 aag-ttt-----tctt------------------gaat-----c
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267180 15 +  21565898 aag-ttt-----tctt------------------gaat-----c
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28634 15 -     45857 aag-ttt-----tctt------------------gaat-----c
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24425 15 -     32606 aag-ttt-----tctt------------------gaat-----c
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          612 15 +      8499 aag-ttt-----tctt------------------gaat-----c
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22124 15 +     70610 aag-ttt-----tctt------------------gaat-----c
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         18989 15 +     36323 aag-ttt-----tctt------------------gaat-----c
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9933 15 -     19938 aagtt-t-----tctt------------------aagt-----c
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 5 C 0
s Cheirogaleus_major.k141_666340                             27612 15 -     33796 aaa-ctt-----tctt------------------gaat-----c
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1799 15 -     15404 aaa-ctt-----tctt------------------gaat-----c
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6053 15 -     32913 aag-ttt-----tctt------------------gaat-----c
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16466 15 -     40346 aag-ttt-----tctt------------------gaat-----c
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16730 15 +    216457 aag-ttt-----tctt------------------gaat-----c
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16509 15 +     39636 aag-ttt-----tctt------------------gaat-----c
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            928 13 +      5346 --g-ttt-----tctt------------------gaat-----c
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39599 14 -    112038 aag-tt------tctt------------------gaat-----c
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5171 14 +     34062 aag-tt------tctt------------------gaat-----c
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339885 15 +  18827391 aag-ttt-----tctt------------------gaat-----c
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6496 15 -     44032 aag-ttt-----tctt------------------gaat-----c
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301211 15 - 135778131 AAG-TTT-----TCTT------------------GAAT-----C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405760 33 -   2368649 AAG-TTT-----TCTTAGACCCTCCAAGATTTAAGAAT-----C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374919 33 - 200372422 AAG-TTT-----TCTTAGACCCTCCAAGATTTAAGAAT-----C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5644 33 -      6605 AAG-TTT-----TCTTAGACCCTCCAAGATTTAAGAAT-----C
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804356 15 +  53390261 aag-t-t----aattt------------------gaaa-----C
i Condylura_cristata.JH655891.1                          I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9474 14 +     10921 AAG-T-T-----TCTT------------------GAAT-----T
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 8 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               862 13 +     87169 agt-t-t-----tctt------------------gaat------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 4
s Dasypus_novemcinctus.JH564415.1                          2107270 15 -   2246927 aagtt-t-----tctt------------------aagt-----c
i Dasypus_novemcinctus.JH564415.1                        I 8 C 0
s Daubentonia_madagascariensis.ctg71                        289627 15 +  12879189 aag-ttt-----tctt------------------gaat-----c
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11861268 15 -  20541912 atg-t-t----ttctt------------------gaaT-----T
i Desmodus_rotundus.KZ672289.1                           I 8 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661455 14 -   1390856 agt-t-t-----tctt------------------gaat-----c
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136248 14 -    198055 agt-t-t-----tctt------------------gaat-----c
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2842 15 +     19438 aaatt-t-----tctt------------------gatt-----t
i Eidolon_helvum.AWHC01266696.1                          I 8 C 0
s Enhydra_lutris.KZ291758.1                               24912931 19 +  41312741 agc-t-t-----tctt------------------gaatcagttc
i Enhydra_lutris.KZ291758.1                              I 5 C 0
s Eptesicus_fuscus.JH977646.1                             12574639 18 +  14770903 aag-t-t-ttcttttt------------------taat-----t
i Eptesicus_fuscus.JH977646.1                            I 153 I 11
s Equus_asinus.JREZ01000139.1                              3038416 14 -   4378816 agt-t-t-----tctt------------------gaat-----c
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21372350 14 +  39960074 agt-t-t-----tctt------------------gaat-----c
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409136 14 -    498745 agt-t-t-----tctt------------------gaat-----c
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               259443 15 +  21539334 aag-ttt-----tctt------------------gaat-----c
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12595 15 -     24895 AAG-TTT-----TCTT------------------GAGT-----C
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40307 15 -     70999 AAG-TTT-----TCTT------------------GAGT-----C
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84266 15 +    112731 AAG-TTT-----TCTT------------------GAGT-----C
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40839 15 +     68309 AAG-TTT-----TCTT------------------GAGT-----C
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51164 15 -     65740 AAG-TTT-----TCTT------------------GAGT-----C
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21794 15 -     75513 AAG-TTT-----TCTT------------------GAGT-----C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 45987 15 -     97555 AAG-TTT-----TCTT------------------GAGT-----C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2714 15 +     30972 AAG-TTT-----TCTT------------------GAGT-----C
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40437 15 -     52037 AAG-TTT-----TCTT------------------GAGT-----C
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56838 15 -    111500 AAG-TTT-----TCTT------------------GAGT-----C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186243288 19 - 206538554 agt-t-t-----tctt------------------gaatcagttg
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185113070 19 - 205367284 agt-t-t-----tctt------------------gaatcagttc
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24418 19 -     30238 agt-t-t-----tctt------------------gaatcagttc
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     119919 15 -    137831 AAC-TAt-----tact------------------aaat-----c
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             3459 15 +     22493 AAC-Tat-----tact------------------aaat-----c
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16928 15 +     32986 AAC-TAT-----TACT------------------AAAT-----C
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               15790 15 +     18121 aag-ttt-----tttt------------------gaat-----c
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 272
s Gorilla_beringei.k141_3358147                               1568 15 -      8343 aag-ttt-----tgtt------------------gaat-----c
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251068 15 - 186649187 aag-ttt-----tgtt------------------gaat-----c
i Gorilla_gorilla.LT578341.1                             C 0 I 35
s Hapalemur_alaotrensis.k141_330369                          12524 15 -     40692 AAG-TTT-----TCTT------------------GAGT-----C
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33925 15 +     49394 AAG-TTT-----TCTT------------------GAGT-----C
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58794 15 -     66874 AAG-TTT-----TCTT------------------GAGT-----C
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7667 15 -     42923 AAG-TTT-----TCTT------------------GAGT-----C
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14667 15 -     53142 AAG-TTT-----TCTT------------------GAGT-----C
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27394 19 -    327341 agt-t-t-----cctt------------------gaatccattc
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546735  1 -   1711038 a-------------------------------------------
i Hipposideros_armiger.JXIK01000431.1                    I 8 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               46054  1 +     49977 A-------------------------------------------
i Hipposideros_galeritus.HipGal_scaffold_23202           I 8 C 0
s Hoolock_leuconedys.ctg274                                    138961 15 -    630532 aag-ttt-----tctt------------------gaat-----c
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65852 19 +     83186 AGT-T-T-----TCTT------------------GAATCAGTTC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               1995 15 +     12352 aag-ttt-----tctt------------------gaat-----c
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9178 15 +     55766 aag-ttt-----tctt------------------gaat-----c
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048516 15 + 191637585 aag-ttt-----tctt------------------gaat-----c
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797848 15 +  11177569 aag-ttt-----tctt------------------gaat-----c
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     679 15 -      1527 aag-ttt-----tctt------------------gaat-----c
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40314 15 +    110728 aag-ttt-----tctt------------------gaat-----c
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757315 15 +  30322482 AAG-TTT-----TCTT------------------GAGT-----C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1008 13 -     13097 --G-TTT-----TCTT------------------GAAT-----C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            959 13 +      5940 --G-TTT-----TCTT------------------GAAT-----C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         590 13 -      5717 --g-ttt-----tctt------------------gaat-----c
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7217 15 -     11567 aag-ttt-----tctc------------------gaat-----c
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8598 15 -     12945 aag-ttt-----tctc------------------gaat-----c
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5972 15 +     29618 aaa-ttt-----tctt------------------gagt-----c
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5969 15 +     31569 aaa-ttt-----tctt------------------gagt-----c
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5981 15 +     24756 aaa-ttt-----tctt------------------gagt-----c
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5973 15 +     16388 aaa-ttt-----tctt------------------gcgt-----c
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810285 19 -   3914936 agt-t-t-----tctt------------------gaattagttc
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               329620 15 -   1826925 aag-ttt-----tctt------------------gaat-----c
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2930 15 +     19643 AAC-TAT-----TATT------------------GAAT-----C
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036589 15 -   6120653 AAC-TAT-----TATT------------------GAAT-----C
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611466 19 +  59628241 agt-t-t-----tctt------------------gaattagctc
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              41902 15 -     61512 aag-ttt-----tctt------------------gaat-----c
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369530 15 -  60120075 aag-ttt-----tctt------------------gaat-----c
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21850 15 +     30207 aag-ttt-----tctt------------------gaat-----c
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18953 15 -     24934 aag-ttt-----tctt------------------gaat-----c
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21736 15 +     30527 aag-ttt-----tctt------------------gaat-----c
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32926 15 -     50087 aag-ttt-----tctt------------------gaat-----t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42664 15 +     51645 aag-ttt-----tctt------------------gaat-----c
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411238 15 - 187317192 AAG-TTT-----TCTT------------------GAAT-----C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396121 15 +  25927173 AAG-TTT-----TCTT------------------GAAT-----C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45252 15 -     62418 aag-ttt-----tctt------------------gaat-----t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21940 15 +     24253 aag-ttt-----tctt------------------gaat-----c
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41697 15 +     59329 aag-ttt-----tctt------------------gaat-----t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267529 15 +    668171 aag-ttt-----tctt------------------gaat-----t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18875 15 +     21031 aag-ttt-----tctt------------------gaat-----c
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32608 15 +     33478 aag-ttt-----tctt------------------gaat-----c
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219797 10 -    270270 ------N-----NNNN------------------NNNN-----N
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 71 C 0
s Mandrillus_leucophaeus.scaffold280                        319003 15 +  24302211 aag-ttt-----tctt------------------gaat-----c
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353835 15 -    752769 aag-ttt-----tctt------------------gaat-----c
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670505 14 -    737560 aga-t-t-----tcct------------------gaat-----c
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217800 14 +    317179 agc-t-t-----tcct------------------gaat-----c
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146970 16 +    207569 aag-t-t---tttctt------------------gagt-----t
i Megaderma_lyra.MegLyr_scaffold_4542                    I 8 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             22800 19 -     74585 agc-t-t-----tctt------------------gaatcagttc
i Mellivora_capensis.MelCap_flattened_line_19308         I 5 C 0
s Mico_argentatus.k141_582562                                 6967 15 +     17804 aag-ttt-----tctt------------------gaat-----c
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7740 15 -     12984 aag-ttt-----tctt------------------gaat-----c
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15702 15 -     26561 aag-ttt-----tctt------------------gaat-----c
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981580 15 +  93316391 AAG-TTT-----TCTT------------------GAAT-----C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181202 15 +    200668 AAG-T-TT----TCTT------------------GAAT-----T
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 8 C 0
s Miniopterus_natalensis.LDJU01000308.1                     494070 15 -   1897963 aag-t-t----tttat------------------tgat-----t
i Miniopterus_natalensis.LDJU01000308.1                  I 1635 I 323
s Miniopterus_schreibersii.MinSch_scaffold_3531             133505 15 +    183988 aag-t-t----tttat------------------tgat-----t
i Miniopterus_schreibersii.MinSch_scaffold_3531          I 1417 I 323
s Miopithecus_ogouensis.k141_1534655                         18996 15 -     27822 aag-ttt-----tctt------------------gaat-----c
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5294 19 +     27589 agt-t-t-----tctt------------------gaattagttc
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     49439 15 -     62432 aag-ttt-----tctt------------------gaat-----c
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175387 15 +    366855 AAA-T-TT----CCTT------------------GAAT-----T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 8 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15148 19 -     63510 agt-t-t-----cctt------------------gaatccattc
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          34543 13 +     47283 A---T-TT----TTTT------------------GAAT-----T
i Murina_feae.MurFea_scaffold_17764                      I 155 I 11
s Mustela_putorius.JH418006.1                             14351739 19 +  14710649 agc-t-t-----tctt------------------gaatcagttc
i Mustela_putorius.JH418006.1                            I 5 C 0
s Myotis_davidii.KB100139.1                                4383178 15 +   6019432 aat-t-t----ttttt------------------gaat-----t
i Myotis_davidii.KB100139.1                              I 137 I 11
s Myotis_myotis.MyoMyo_scaffold_423922                         134 19 +       920 AAT-T-TTTTTTTTTT------------------GAAT-----T
i Myotis_myotis.MyoMyo_scaffold_423922                   n 164 I 224
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116711 15 +    130748 AAATG-T-----TCTT------------------AAGT-----A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 7 C 0
s Nasalis_larvatus.k141_1350636                              25298 33 +     34575 aag-ttt-----tcttagagcctccaagatttaagaat-----c
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465679 19 -  31847680 agt-t-t-----tctt------------------gaattagttc
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   124055 15 -    149072 AAG-T-TT----TCTT------------------GAAT-----T
i Noctilio_leporinus.NocLep_scaffold_7894                I 8 C 0
s Nomascus_annamensis.k141_1771965                           50246 15 -    132029 aag-ttt-----tctt------------------gagt-----c
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6342 15 -     16345 aag-ttt-----tctt------------------gagt-----c
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12225 15 +     22201 aag-ttt-----tctt------------------gagt-----c
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410562 15 -  22158432 aag-ttt-----tctt------------------gagt-----c
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22625 15 -     54323 aag-ttt-----tctt------------------gagt-----c
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195081 19 +   9404916 agt-t-t-----tctt------------------gaattagttc
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93631705 15 + 196305487 AAC-TAT-----TATT------------------GAAT-----C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1094 15 +      2758 AAC-TAT-----TATT------------------GAAT-----C
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559959 15 - 199412804 AAC-TAT-----TATT------------------GAAT-----C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448463 19 +   2017862 agt-t-t-----tctt------------------gaatcagttc
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36129 19 +    559221 agt-t-t-----tctt------------------gaattagctc
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_85057                         23193 15 -     23432 AAC-TAT-----tatt------------------aaat-----c
i Otolemur_crassicaudatus.k141_85057                     C 0 C 0
s Otolemur_garnettii.GL873799.1                             347758 15 +   1103335 AAC-TAT-----TACT------------------AAAT-----C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468457 15 - 189151597 AAG-TTT-----TGTT------------------GAAT-----C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21008 19 -    230217 agt-t-t-----tctt------------------gaatcagttc
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18458334 19 -  18783137 agt-t-t-----tctt------------------gaatcagttc
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3969059 19 +   8748460 agt-t-t-----tctt------------------gaatcagttc
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   239848 15 - 183742232 AAG-TTT-----TCTT------------------GAAT-----C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6314 15 +     21308 aag-ttt-----tctt------------------gaat-----c
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287351 15 -  20919399 aag-ttt-----tctt------------------gaat-----c
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18967 15 -     27687 aag-ttt-----tctt------------------gaat-----c
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12103 15 +     16796 aag-ttt-----tctt------------------gaat-----c
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18913 15 -     23640 aag-ttt-----tctt------------------gaat-----c
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11923 19 +     78924 agt-t-t-----tctt------------------gaatcagttc
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21813 15 +     31479 AAC-TAT-----TATT------------------GAAT-----C
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14183 15 -     24908 AAC-TAT-----TATT------------------GAAT-----C
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5752 33 +      7560 aag-ttt-----tcttagaccctccaagatttaagaat-----c
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61459 33 -     63152 AAG-TTT-----TCTTAGACCCTCCAAGATTTAAGAAT-----C
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44058 33 +     45295 aag-ttt-----tcttagaccctccaagatttaagaat-----c
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1737 33 +      5735 AAG-TTT-----TCTTAGACCCTCCAAGATTTAAGAAT-----C
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             61949 15 +    207309 aag-ttt-----tctt------------------gaat-----c
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3069 15 -     25401 aag-ttt-----tctt------------------gaat-----c
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28784 15 +     58159 aag-ttt-----tctt------------------gaat-----c
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29060 15 +     63561 aag-ttt-----tctt------------------gaat-----c
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28823 15 +     51148 aag-ttt-----tctt------------------gaat-----c
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553816 15 -   4542175 aag-ttt-----tctt------------------gaat-----c
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28807 15 +     51125 aag-ttt-----tctt------------------gaat-----c
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5227 15 +     39866 aag-ttt-----tctt------------------gaat-----c
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           314 15 -      9282 aag-ttt-----tctt------------------gaat-----c
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39715 15 -     87950 aag-ttt-----tcct------------------gaat-----c
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40108 15 -     88961 aag-ttt-----tctt------------------gaat-----c
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4807 15 -     39403 aag-ttt-----tctt------------------gaat-----c
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39761 15 +     87928 aag-ttt-----tctt------------------gaat-----c
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4805 15 -     60166 aag-ttt-----tctt------------------gaat-----c
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11741 15 -     67232 aag-ttt-----tctt------------------gaat-----c
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39657 15 -     90634 aag-ttt-----tctt------------------gaat-----c
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41125 15 +     89403 aag-ttt-----tctt------------------gaat-----c
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174074 15 - 189387572 AAG-TTT-----TGTT------------------GAAT-----C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189072 15 -   9816681 aag-ttt-----tgtt------------------gaat-----c
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24235 33 +     69807 AAG-TTT-----TCTTAGACCCTCCAGGATTTAAGAAT-----C
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41430 33 -     80239 aag-ttt-----tcttagaccctccaggatttaagaat-----c
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980471 15 +   4620579 AAg-ttt-----tctt------------------gagt-----c
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563061 15 -   2598838 AAC-TTT-----TCTT------------------GAAT-----C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            699 15 -      7103 aac-ttt-----tctt------------------gaat-----c
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1296 15 -     11706 aac-ttt-----tctt------------------gaat-----c
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5031 15 -     30655 aac-ttt-----tctt------------------gaat-----c
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31356 15 +     46564 aac-ttt-----tctt------------------gaat-----c
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91627 15 -     98465 aac-ttt-----tctt------------------gaat-----c
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5266 15 +     35169 aac-ttt-----tctt------------------gaat-----c
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48448 15 -     66298 aag-t-t----ttctt------------------gAGT-----T
i Pteronotus_parnellii.KE847780.1                        I 8 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1523 19 -     18639 agc-t-t-----tctt------------------gaatcagttc
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 5 C 0
s Pteropus_alecto.KB030862.1                               5837425 15 -  28871421 aaatg-t-----tctt------------------gATT-----T
i Pteropus_alecto.KB030862.1                             I 8 C 0
s Pteropus_vampyrus.KN525825.1                             3533986 15 -   4952924 aaatg-t-----tctt------------------gATT-----T
i Pteropus_vampyrus.KN525825.1                           I 8 C 0
s Puma_concolor.QAVW01001104.1                            18095885 19 +  38429054 agt-t-t-----tctt------------------gaatcagttc
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23623 33 +     91421 AAG-TTT-----TCTTAGACCCTCCAAGATTTAAGAAT-----C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150115 33 -   7812017 AAG-TTT-----TCTTAGACCCTCCAAGATTTAAGAAT-----C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4492 33 +     72585 aag-ttt-----tcttagaccctccaagatttaagaat-----c
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2910073 14 +   3329780 aag-t-t-----tttt------------------aaat-----t
i Rhinolophus_sinicus.LVEH01000134.1                     I 8 C 0
s Rhinopithecus_bieti.k119_221883                            25456 33 +     27361 aag-ttt-----tcttagagcctccaagatttaagaat-----c
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118806 33 + 195417433 AAG-TTT-----TCTTAGAGCCTCCAAGATTTAAGAAT-----C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233064 33 -   7961872 aag-ttt-----tcttagagcctccaagatttaagaat-----c
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71448 15 -    116970 aaatt-t-----tctc------------------gatt-----t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 8 C 0
s Saguinus_bicolor.k141_1429097                                926 13 +     27962 --g-ttt-----tctt------------------gaat-----c
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              939 13 +      6077 --g-ttt-----tctt------------------gaat-----c
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              952 13 +      5971 --c-ttt-----tctt------------------gaat-----c
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1007 13 +      5932 --G-TTT-----TCTT------------------GAAT-----C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1153 13 -      2099 --G-TTT-----TCTT------------------GAAT-----C
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388185 13 - 209938924 --g-ttt-----tctt------------------gaat-----c
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 954 13 +      5979 --C-TTT-----TCTT------------------AAAT-----C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1338 13 -      4301 --g-ttt-----tctt------------------gaat-----c
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235390 15 +   5703754 aag-ttt-----tgtt------------------gaat-----c
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4980 15 +     21866 aag-ttt-----tgtt------------------gaat-----c
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113117 15 +    313613 aag-t-t----aactt------------------gaat-----c
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_158471                         21941 33 +     27374 aag-ttt-----tcttagaccctccaagatttaagaat-----c
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25461 33 +     58920 aag-ttt-----tcttagaccctccaagatttaagaat-----c
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11956 33 -     45317 aag-ttt-----tcttagaccctccaagatttaagaat-----c
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19613 33 -     42441 AAG-TTT-----TCTTAGACCCTCCAAGATTTAAGAAT-----C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22295 33 -     29113 aag-ttt-----tcttagaccctccaagatttaagaat-----c
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25364 33 -     48123 AAG-TTT-----TCTTAGACCCTCCAAGATTTAAGAAT-----C
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855805 14 -   1910179 aag-t-t-----tctt------------------gaat-----c
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3524 19 -     97271 agt-t-t-----tctt------------------agatcagttc
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 4 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121555 19 +    196729 agt-t-t-----cctt------------------gaatccattc
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387544 15 +   1523678 aag-ttt-----tctt------------------gaat-----c
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_231636                 217  1 +      3470 -------------------------------------------t
i Tadarida_brasiliensis.TadBra_scaffold_231636           n 82 I 272
s Tamandua_tetradactyla.TamTet_scaffold_445853                1580 15 -      2009 aAATT-T-----TCTT------------------AAGT-----A
i Tamandua_tetradactyla.TamTet_scaffold_445853           I 7 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188189 14 +    199430 agt-t-t-----tctc------------------aaat-----c
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102144 14 -    539355 agt-t-t-----tctc------------------gaat-----c
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4251 15 +      6850 AAG-TAT-----TTTT------------------GAAT-----C
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4290 15 +     20590 AAG-TAT-----TTTT------------------GAAT-----C
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349832 15 - 186847797 AAG-TTT-----TCTT------------------GAAT-----C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16934 15 -     31044 aagtt-t-----tctt------------------aagt-----c
i Tolypeutes_matacus.TolMat_scaffold_31955               I 8 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476262 15 -    610378 AAG-T-TT----TCTT------------------GAAT-----T
i Tonatia_saurophila.TonSau_scaffold_294                 I 8 C 0
s Trachypithecus_auratus.k141_1189070                        17508 33 +     26378 AAG-TTT-----TCTTAGACCCTCCAAGATTTAAGAAT-----C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30189 33 -     78344 AAG-TTT-----TCTTAGACCCTCCAAAATTTAAGAAT-----C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16829 33 +     25722 aag-ttt-----tcttagaccctccaagatttaagaat-----c
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25052 33 -     62838 AAG-TTT-----TCTTAGACCCTCCAAGATTTAAGAAT-----C
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25169 33 +     46913 aag-ttt-----tcttagaccctccaagatttaagaat-----c
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          5979 33 -     28527 aag-ttt-----tcttagaccctccaagatttaagaat-----c
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      26991 33 -     64340 AAC-TTT-----TCTTAGACCCTCCAAGATTTAAGAAT-----C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25028 33 -     63452 AAC-TTT-----TCTTAGACCCTCCAAGATTTAAGAAT-----C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6470 33 +     22490 aag-ttt-----tcttagaccctccaagatttaagaat-----c
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         4081 33 +      4141 AAG-TTT-----TCTTAGACCCTCCAAGATTTAAGAAT-----C
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6896 33 -     13050 aag-ttt-----tcttagaccctccaagatttaagaat-----c
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252131 33 -   6242583 AAG-TTT-----TCTTAGACCCTCCAAAATTTAAGAAT-----C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57863 33 +     59866 aag-ttt-----tcttagaccctccaagatttaagaat-----c
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830120 15 -   4065304 GAA-TTC-----TTTC------------------ATAT-----C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4672 15 -     70247 GAG-TTT-----TTTC------------------ATAT-----C
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104345 15 -    105689 AAG-T-T----AACTT------------------GAAT-----C
i Uropsilus_gracilis.UroGra_scaffold_7153                I 2 C 0
s Ursus_maritimus.KK499267.1                                178413 19 +   5085361 att-t-t-----tctt------------------gaatcagttc
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22112 15 -     30710 aag-ttt-----tctt------------------gagt-----c
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21019 15 -    147434 aag-ttt-----tctt------------------gagt-----c
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101847 19 -    112863 agt-t-t-----tctt------------------gaattagctc
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25683 19 -     86975 agt-t-t-----tctt------------------gaatcagttc
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_lucifugus.GL429869.1                               378852 458 +   4330536 I
e Myotis_brandtii.KE162005.1                               9788622 460 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Loxodonta_africana.GL010049.1                           39077402  0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1229 26 +     36723 AG-TTCTTA--AAG---GGATTC-----------ATG-C--TCTT-T
s Acinonyx_jubatus.LLWD01001279.1                           809650 19 +   1699592 ------ttg-aa-g---tgat-t-----------gtg-c--tgtt--
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411908 20 +  29979442 ------ttc-ga-g---tgat-t-----------gtg-c--tgtt-t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44517 26 +     53615 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40337 26 +     44087 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13041 26 -     21945 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14719 26 +     32033 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69284 18 -     84148 ag-ttctta--aag---tgattc-----------a------------
i Alouatta_belzebul.k141_1011583                         C 0 I 5
s Alouatta_caraya.k141_1109140                               41507 26 -     78289 ag-ttctta--aag---tgattc-----------atg-t--tgtt-t
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40955 26 +     55831 ag-ttctta--agg---tgattc-----------atg-t--tgtt-t
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39396 18 -     64179 ag-ttctta--aag---tgattc-----------a------------
i Alouatta_juara.k141_1687208                            C 0 I 5
s Alouatta_macconnelli.k141_361275                           21039 26 -     24835 ag-ttctta--agg---tgattc-----------atg-t--tgtt-t
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38022 26 +     45454 ag-ttctta--aag---tgattc-----------atg-t--tgtt-t
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43721 26 +     70886 ag-ttctta--aag---tgattc-----------atg-t--tgtt-t
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5848 18 +     30854 ag-ttctta--aag---tgattc-----------a------------
i Alouatta_puruensis.k141_251022                         C 0 I 5
s Alouatta_seniculus.k141_928287                             29987 18 +     42133 ag-ttctta--aag---tgattc-----------a------------
i Alouatta_seniculus.k141_928287                         C 0 I 5
s Anoura_caudifer.AnoCau_scaffold_1412                      173247 25 -    412891 ag-ttctta-aa-g---tgat-c-----------atg-c--tctt-t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   47796 25 -     65372 ag-ctctta--aag---tgattc-----------atg-t--t-tt-t
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41541 25 +     43593 ag-ctctta--aag---tgattc-----------atg-t--t-tt-t
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669554 25 +   5030052 AG-CTCTTA--AAG---TGATTC-----------ATG-T--T-TT-T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21196 25 -     23494 ag-ctctta--aag---tgattc-----------atg-t--t-tt-t
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6332 25 +      8415 ag-ctctta--aag---tgattc-----------atg-t--t-tt-t
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16384 27 -     45910 AG-TTCTTA--AGG---TGATTC-----------TAT-G-GTTTT-T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  1553 25 -     15198 AG-TTCTTAA-A-G---TGAT-C-----------ATG-C--TCTT-T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271782 26 +  21539123 ag-ttctta--aag---tgattc-----------atg-t--tgtt-t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7953 23 +     48076 ag-ttctta--aag---tgattc-----------atg-t--t----t
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3087 26 -     28759 ag-ttctta--aag---tgattc-----------atg-t--tgtt-t
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30639 26 +     44353 ag-ttctta--aag---tgattc-----------atg-t--tgtt-t
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46014 18 -     71267 ag-ttctta--aag---tgattc-----------a------------
i Ateles_marginatus.k141_970259                          C 0 I 5
s Ateles_paniscus.k141_866194                                20070 26 -     33135 ag-ttctta--aag---tgattc-----------atg-t--tgtt-t
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3201 27 +     11645 ag-ttctta--aag---tgattc-----------tgt-a-gtttt-t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3202 27 -     19611 ag-ttctta--aag---tgattc-----------tgt-a-gtttt-t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   4974 26 +     28062 ag-tcctta--aag---tgattc-----------atg-t--tgtt-t
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40268 26 -     91139 ag-tcctta--aag---tgattc-----------atg-t--tgtt-t
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17794 26 +     95584 ag-tcctta--aag---tgattc-----------atg-t--tgtt-t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17707 26 +    119600 ag-tcctta--aag---tgattc-----------atg-t--tgtt-t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7199 26 +     18648 ag-ttctta--aag---agattc-----------atgtt--t-tt-t
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6884 25 -     13885 ag-ttctaa--aag---tgattc-----------atg-t--t-tt-t
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15559 26 +     17162 ag-ttctta--aag---agattc-----------atgtt--t-tt-t
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450515 26 + 189096842 AG-TTCTTA--AAG---AGATTC-----------ATGTT--T-TT-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16808 26 -     18408 ag-ttctta--aag---agattc-----------atgtt--t-tt-t
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502214 20 +  60362399 ------ttc-aa-g---tcat-t-----------gtg-c--tgtt-t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5844 20 -     23171 ------ttc-aa-g---tcat-t-----------gtg-c--tgtt-t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219205 20 +   9314153 ------ttc-aa-g---tcat-t-----------gtg-c--tgtt-t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41612330 20 +  59632846 ------ttc-aa-g---tcat-t-----------gtg-c--tgtt-t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45103900 20 -  63665305 ------ttc-aa-g---tcat-t-----------gtg-c--tgtt-t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267574 25 +    496798 AG-TTCTTA--AGC---TGATT------------GTG-C--TGTT-T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               1639 25 +      5315 ag-ttctta-aa-g---tgat-c-----------atg-c--tctt-t
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cebuella_niveiventris.k141_592277                           2094 26 -     12580 ag-ttctta--aag---agattc-----------atgtt--t-tt-t
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               39980 26 +     53515 ag-ttctta--aag---agattc-----------atgtt--t-tt-t
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368182 25 -  26074798 ag-ttctta--aag---tgattc-----------atg-t--t-tt-t
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5071 25 -     34880 ag-ttctta--aag---tgattc-----------atg-t--t-tt-t
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64166 25 -     89041 ag-ttctta--aag---tgattc-----------atg-t--t-tt-t
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            743 25 -      1636 AG-TTATTA--AGC---TGATT------------GTG-C--TTTT-C
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489185 25 -  27778364 aa-ttttta-aa-g---tgat-g-----------gtg-c--tgtt-t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16018 25 +     27315 aa-ttttta-aa-g---tgat-g-----------gtg-c--tgtt-t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137680 26 -   4669795 AG-TTCTTA--AAG---GGATTC-----------ATG-C--TGTT-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41420 26 +     47900 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41252 26 -     44860 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41234 26 -    148725 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24296 26 -     40656 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4231 26 +     20796 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8486 26 -     17524 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24175 26 -     34525 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8885 26 -     25376 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361451 26 -  39242232 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267195 26 +  21565898 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28649 26 -     45857 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24440 26 -     32606 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          627 26 +      8499 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22139 26 +     70610 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19004 26 +     36323 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9948 21 -     19938 ag-----tt-aa-g---taaa-c-----------gtg-c--tatt-t
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             27627 27 -     33796 ag-ttatta--aag---tgattc-----------tgc-a-gtttt-t
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1814 27 -     15404 ag-ttctta--aag---tgattc-----------tgc-a-gtttt-t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6068 26 -     32913 ag-ttctta--aag---tgactc-----------atg-t--tgtt-t
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16481 26 -     40346 ag-ttctta--aag---tgactc-----------atg-t--tgtt-t
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16745 26 +    216457 ag-ttctta--aag---tgactc-----------atg-t--tgtt-t
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16524 26 +     39636 ag-ttctta--aag---tgactc-----------atg-t--tgtt-t
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            941 25 +      5346 ag-ttctta--aag---tgattc-----------atg-t---gtt-t
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39613 26 -    112038 ag-ccctta--aag---tgactc-----------atg-t--tgtt-t
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5185 26 +     34062 ag-ccctta--aag---tgattc-----------ata-t--tgtt-t
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339900 26 +  18827391 aa-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6511 26 -     44032 aa-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301226 26 - 135778131 AA-TTCTTA--AAG---GGATTC-----------ATG-C--TGTT-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405793 26 -   2368649 AG-TTCTTA--AAG---GGATTC-----------ACG-C--TGTT-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374952 26 - 200372422 AG-TTCTTA--AAG---GGATTC-----------ACG-C--TGTT-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5677 26 -      6605 AG-TTCTTA--AAG---GGATTC-----------ACG-C--TGTT-T
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804371 24 +  53390261 AG-TTCCTAA-A-A----GAT-C-----------ACA-T--Tatt-t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9488 25 +     10921 AG-TTCTGAA-A-A---TGAT-T-----------ATG-C--TATT-T
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               879 20 +     87169 ------tcg-at-g---tgat-t-----------gtt-c--tgtt-g
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 4 C 0
s Dasypus_novemcinctus.JH564415.1                          2107285 21 -   2246927 ag-----tt-aa-g---taaa-t-----------gta-c--tgtt-t
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289642 27 +  12879189 tg-ttctta--aag---agattc-----------tgc-a-gtttt-t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11861283 25 -  20541912 AG-TTCTTA-CA-G---TGAT-C-----------ATG-C--TCTt-t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661469 25 -   1390856 ag-ttttta-aa-g---tgat-g-----------gtg-c--tgtt-t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136262 25 -    198055 ag-ttttta-aa-g---tgat-g-----------gtg-c--tgtt-t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2857 25 +     19438 ca-ttctTAA-A-G---CGAT-T-----------GTA-C--TATT-T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Enhydra_lutris.KZ291758.1                               24912950 20 +  41312741 ------ttc-aa-g---tgat-t-----------gtg-c--tgtt-t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12574668 11 +  14770903 -----------------TGAC-T-----------ATG-C--TA----
i Eptesicus_fuscus.JH977646.1                            I 11 I 9
s Equus_asinus.JREZ01000139.1                              3038430 25 -   4378816 ag-ttttta-aa-g---caac-t-----------gtg-c--tgtt-t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21372364 25 +  39960074 ag-ttttta-aa-g---gaac-t-----------gtg-c--tgtt-t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409150 25 -    498745 ag-ttttta-aa-g---caac-t-----------gtg-c--tgtt-t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               259458 26 +  21539334 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12610 25 -     24895 AG-TTTTTA--AAG---TGATTC-----------TGC-A-GTTT---
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40322 25 -     70999 AG-TTTTTA--AAG---TGATTC-----------TGC-A-GTTT---
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84281 25 +    112731 AG-TTTTTA--AAG---TGATTC-----------TGC-A-GTTT---
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40854 25 +     68309 AG-TTTTTA--AAG---TGATTC-----------TGC-G-GTTT---
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51179 25 -     65740 AG-TTTTTA--AAG---TGATTC-----------TGC-A-GTTT---
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21809 25 -     75513 AG-TTTTTA--AAG---TGATTC-----------TGC-A-GTTT---
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46002 25 -     97555 AG-TTTTTA--AAG---TGATTC-----------TGC-A-GTTT---
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2729 25 +     30972 TG-TTTTTA--AAG---TGATTC-----------TGC-A-GTTT---
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40452 25 -     52037 AG-TTTTTA--AAG---TGATTC-----------TGC-A-GTTT---
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56853 25 -    111500 AG-TTTTTA--AAG---TGATTC-----------TGC-A-GTTT---
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186243307 20 - 206538554 ------ttg-aa-g---tgat-t-----------gtg-c--tgtt-g
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185113089 20 - 205367284 ------ttg-aa-g---tgat-t-----------gtg-c--tgtt-g
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24437 20 -     30238 ------ttg-ca-g---tgac-t-----------gtg-c--tgtt-g
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     119934 27 -    137831 ag-ttctta--agg---tgattc-----------tag-a-gtttt-t
i Galago_moholi.ctg3793                                  C 0 I 514
s Galago_senegalensis.k141_991736                             3474 27 +     22493 ag-ttctta--agg---tgattc-----------tag-a-gtttt-t
i Galago_senegalensis.k141_991736                        C 0 I 515
s Galagoides_demidoff.k141_561628                            16943 27 +     32986 AG-TTCTTA--AGG---TGATTC-----------TGA-A-GTTTT-T
i Galagoides_demidoff.k141_561628                        C 0 I 521
s Galeopterus_variegatus.GalVar_scaffold_132127               3908 24 +      5976 AG-TTCTTA--A-G---TGAT-C-----------ATG-C--TGTT-A
i Galeopterus_variegatus.GalVar_scaffold_132127          I 32 I 126
s Gorilla_beringei.k141_3358147                               1583 26 -      8343 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 67134 26 +  33314783 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Gorilla_gorilla.LT578336.1                             I 470 C 0
s Hapalemur_alaotrensis.k141_330369                          12539 25 -     40692 AG-TTTTTA--AAG---TGATTC-----------TGC-A-GTTT---
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33940 25 +     49394 AG-TTTTTA--AAG---TGATTC-----------TGC-A-GTTT---
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58809 25 -     66874 AG-TTTTTA--AAG---TGATTC-----------TGC-A-GTTT---
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7682 25 -     42923 AG-TTTTTA--AAG---TGATTC-----------TGC-A-GTTT---
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14682 25 -     53142 AG-TTTTTA--AAG---TGATTC-----------TGC-A-GTTT---
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27413 20 -    327341 ------ttg-ac-g---tgat-t-----------gtg-c--tgtt-g
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546736 16 -   1711038 -----------a-g---tgat-t-----------GTT-C--TGTT-t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               46055 16 +     49977 -----------A-G---TGAT-T-----------ATG-C--TGTT-T
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    138976 26 -    630532 ag-ttctta--aag---gttttc-----------gtg-c--tgtt-t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65871 20 +     83186 ------TGGA-C-G---TGAT-T-----------GTG-G--TATC-G
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               2010 26 +     12352 ag-ttctta--aag---gttttc-----------atg-c--tgtt-t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9193 26 +     55766 ag-ttctta--aag---gttttc-----------atg-c--tgtt-t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048531 26 + 191637585 ag-ttctta--aag---gttttc-----------gtg-c--tgtt-t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797863 26 +  11177569 ag-ttctta--aag---gttttc-----------gtg-c--tgtt-t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     694 27 -      1527 ag-ttctta--aag---tgattc-----------tac-a-gtttt-t
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40329 26 +    110728 ag-ttctta--aag---tgattc-----------atg-t--tgtt-t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757330 25 +  30322482 AG-TTTTTA--AAG---TGATTC-----------TGC-A-GTTT---
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1021 25 -     13097 AG-TTCTTA--AAG---TGATTT-----------ATG-T--T-TT-T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            972 25 +      5940 AG-TTCTTA--AAG---TGATTT-----------ATG-T--T-TT-T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         603 25 -      5717 ag-ttctta--aag---tgattt-----------atg-t--t-tt-t
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7232 25 -     11567 ag-ttctga--aag---tgattc-----------atg-t--t-tt-t
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8613 25 -     12945 ag-ttctga--aag---tgattc-----------atg-t--t-tt-t
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          5987 27 +     29618 ag-ttctta--aag---tgatgc-----------tgc-a-gtttt-t
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              5984 27 +     31569 ag-ttctta--aag---tgatgc-----------tgc-a-gtttt-t
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          5996 27 +     24756 ag-ttctta--aag---tgatgc-----------tgc-a-gtttt-t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       5988 27 +     16388 ag-ttctta--aag---tgatgc-----------tgc-a-gtttt-t
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810304 20 -   3914936 ------ttc-aa-g---tgat-t-----------gtg-c--tctt-t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               329635 26 -   1826925 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2945 27 +     19643 AA-TTCTTA--AGG---TGATTC-----------TGG-G-ATTTT-C
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036604 27 -   6120653 AA-TTCTTA--AGG---TGATTC-----------TGG-G-ATTTT-C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39077402  5 +  43346337 -----------------------------------------cctt-t
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41611485 20 +  59628241 ------ttc-aa-g---tcat-t-----------gtg-c--tgtt-t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              41917 26 -     61512 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369545 26 -  60120075 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21865 26 +     30207 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18968 26 -     24934 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21751 26 +     30527 ag-ttctta--aag---ggattc-----------atg-c--tatt-t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32941 26 -     50087 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42679 26 +     51645 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411253 26 - 187317192 AG-TTCTTA--AAG---GGATTC-----------ATG-C--TGTT-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396136 26 +  25927173 AG-TTCTTA--AAG---GGATTC-----------ATG-C--TGTT-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45267 26 -     62418 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21955 26 +     24253 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41712 26 +     59329 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267544 26 +    668171 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18890 26 +     21031 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32623 26 +     33478 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219807 25 -    270270 NN-NNNNNN-NN-N---NNNN-N-----------NNN-N--NNNN-N
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319018 26 +  24302211 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353850 26 -    752769 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670519 20 -    737560 ------tta-aa-g---tgat-t-----------gta-c--tgct-t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217814 20 +    317179 ------tta-aa-g---tgat-t-----------gta-c--tgct-t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       146986 26 +    207569 ag-ttctta-aa-a---tgat-t-----------gca-c--tgttgt
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             22819 20 -     74585 ------ttc-aa-g---taat-t-----------gtg-c--tgtt-t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mico_argentatus.k141_582562                                 6982 26 +     17804 ag-ttctta--aag---agattc-----------atgtt--t-tt-t
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7755 26 -     12984 ag-ttctta--aag---agattc-----------atgtt--t-tt-t
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15717 26 -     26561 ag-ttctta--aag---agatgc-----------atgtt--t-tt-t
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981595 28 +  93316391 AG-TTCTTA--AAG---TGATTC-----------TAT-ACTTTTT-T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181217 25 +    200668 AG-TTCTTAA-A-G---TGAT-C-----------ATG-T--TCTT-T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000308.1                     494408 25 -   1897963 g-attcttc-ta-taagtgac-t-----------ttg-t--tg----
i Miniopterus_natalensis.LDJU01000308.1                  I 323 I 8
s Miniopterus_schreibersii.MinSch_scaffold_3531             133843 25 +    183988 g-attcttc-ta-taagtgac-t-----------ttg-t--tg----
i Miniopterus_schreibersii.MinSch_scaffold_3531          I 323 I 8
s Miopithecus_ogouensis.k141_1534655                         19011 26 -     27822 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5313 20 +     27589 ------ttc-aa-g---tgat-t-----------gtg-c--tctt-t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     49454 27 -     62432 ag-ttctta--aag---tgattc-----------tgt-a-ctttt-t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175402 25 +    366855 AG-TTCTTAA-A-G---CGGT-C-----------ATA-C--TCTT-T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15167 20 -     63510 ------ttg-ac-g---tgat-t-----------gtg-c--tatt-g
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          34567 11 +     47283 -----------------CGAT-T-----------ATG-C--TA----
i Murina_feae.MurFea_scaffold_17764                      I 11 I 9
s Mustela_putorius.JH418006.1                             14351758 20 +  14710649 ------ttc-aa-g---tgat-t-----------gtg-c--tgtt-t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_davidii.KB100139.1                                4383204 11 +   6019432 -----------------TGAT-T-----------ATG-C--TA----
i Myotis_davidii.KB100139.1                              I 11 I 9
s Myotis_myotis.MyoMyo_scaffold_185951                        3175 11 +      3929 -----------------TGAT-T-----------ATG-C--TA----
i Myotis_myotis.MyoMyo_scaffold_185951                   I 164 I 9
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116726 21 +    130748 AA-----TTA-A-A---TGAA-T-----------GTA-C--TGTT-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              25331 26 +     34575 ag-ttctta--aag---ggattc-----------acg-c--tatt-t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465698 20 -  31847680 ------ttc-aa-g---tgat-t-----------gtg-c--tctt-t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   124070 26 -    149072 AG-TTCTTAAAA-A---TGAT-T-----------GTA-T--TTTT-T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           50261 37 -    132029 ag-ttctta--aaa---gttttcttgagtcagtcgtg-c--tgtt-t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6357 37 -     16345 ag-ttctta--aaa---gttttcttgagtcagtcgtg-c--tgtt-t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12240 37 +     22201 ag-ttctta--aaa---gttttcttgagtcagtcgtg-c--tgtt-t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410577 37 -  22158432 ag-ttctta--aaa---gttttcttgagtcagtcgta-c--tgtt-t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22640 37 -     54323 ag-ttctta--aaa---gttttcttgagtcagtcgtg-c--tgtt-t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195100 20 +   9404916 ------ttt-aa-g---tcat-t-----------gtg-c--tgtt-t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93631720 27 + 196305487 AG-TTCTTA--AGG---TGATTC-----------TGG-G-GTTTT-T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1109 27 +      2758 AG-TTCTTA--AGG---TGATTC-----------TGG-G-GTTTT-T
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93559974 27 - 199412804 AG-TTCTTA--AGG---TGATTC-----------TGG-G-GTTTT-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448482 20 +   2017862 ------ttc-aa-g---tgat-t-----------gtg-c--tgtt-t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36148 20 +    559221 ------ttc-aa-g---tcat-t-----------gtg-c--tgtt-t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_85057                         23208 27 -     23432 cg-ttctta--agg---tgattc-----------tgg-a-gtttt-t
i Otolemur_crassicaudatus.k141_85057                     C 0 N 0
s Otolemur_garnettii.GL873799.1                             347773 27 +   1103335 AG-TTCTTA--AGG---TGATTc-----------tgg-a-gtttt-t
i Otolemur_garnettii.GL873799.1                          C 0 I 821
s Pan_troglodytes.CM009242.2                               1468472 26 - 189151597 AG-TTCTTA--AAG---GGATTC-----------ATG-C--TCTT-T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21027 20 -    230217 ------ttg-aa-g---tgat-t-----------atg-c--tgtt-g
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18458353 20 -  18783137 ------ttg-aa-g---tgat-t-----------gtg-c--tgtt-g
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3969078 20 +   8748460 ------ttg-aa-g---tgat-t-----------gtg-c--tgtt-g
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   239863 26 - 183742232 AG-TTCTTA--AAG---GGATTC-----------ATG-C--TGTT-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6329 26 +     21308 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287366 26 -  20919399 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  18982 26 -     27687 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12118 26 +     16796 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18928 26 -     23640 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11942 20 +     78924 ------tcg-aa-g---tgat-t-----------gtg-c--tgtt-g
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21828 27 +     31479 AG-TTCTTA--AGG---TGATTC-----------TGT-G-GTTTT-T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14198 27 -     24908 AG-TTCTTA--AGG---TGATTC-----------TGT-G-GTTTT-T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5785 26 +      7560 ag-ttctta--aag---gtattc-----------acg-c--tgtt-t
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61492 26 -     63152 AG-TTCTTA--AAG---GGATTC-----------ACG-C--TGTT-T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44091 26 +     45295 ag-ttctta--aag---ggattc-----------acg-c--tgtt-t
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1770 26 +      5735 AG-TTCTTA--AAG---GGATTC-----------ACG-C--TGTT-T
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             61964 26 +    207309 ag-tcctta--aag---tgattc-----------atg-c--tgtt-t
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3084 26 -     25401 ag-tcctta--aag---tgattc-----------atg-t--tgtt-t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28799 26 +     58159 ag-tcctta--aag---tgattc-----------atg-c--tgtt-t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29075 26 +     63561 ag-tcctta--aag---tgattc-----------atg-c--tgtt-t
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28838 26 +     51148 ag-tcctta--aag---tgattc-----------atg-c--tgtt-t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553831 26 -   4542175 ag-tcctta--aag---tgattc-----------atg-t--tgtt-t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28822 26 +     51125 ag-tcctta--aag---tgattc-----------atg-c--tgtt-t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5242 26 +     39866 ag-ttctta--aag---tgactc-----------atg-t--tgtt-t
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           329 26 -      9282 ag-ttctta--aag---tgactc-----------atg-t--tgtt-t
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39730 26 -     87950 ag-ttctta--aag---tgactc-----------atg-t--tgtt-t
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40123 26 -     88961 ag-ttctta--aag---tgactc-----------atg-t--tgtt-t
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4822 26 -     39403 ag-ttctta--aag---tgactc-----------atg-t--tgtt-t
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39776 26 +     87928 ag-ttctta--aag---tgactc-----------atg-t--tgtt-t
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4820 26 -     60166 ag-ttctta--aag---tgactc-----------atg-t--tgtt-t
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11756 26 -     67232 ag-ttctta--aag---tgactc-----------atg-t--tgtt-t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39672 26 -     90634 ag-ttctta--aag---tgactc-----------ata-t--tgtt-t
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41140 26 +     89403 ag-ttctta--aag---tgactc-----------atg-t--tgtt-t
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174089 26 - 189387572 AG-TTCTTA--AAG---GGATTC-----------ATG-C--TGTT-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189087 26 -   9816681 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24268 26 +     69807 AG-TTCTTA--AAG---GGATTC-----------ATG-C--TGTT-T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41463 26 -     80239 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980486 25 +   4620579 ag-ttttta--AAG---TGATTC-----------TGC-A-GTTT---
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563076 27 -   2598838 AG-TTCTTA--AAG---TGATTC-----------TAT-A-GTTTT-T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            714 27 -      7103 ag-ttctta--aag---tgattc-----------tat-a-gtttt-t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1311 27 -     11706 ag-ttctta--aag---tgattc-----------tat-a-gtttt-t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5046 27 -     30655 ag-ttctta--aag---tgattc-----------tat-a-gtttt-t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31371 27 +     46564 ag-ttctta--aag---tgattc-----------tat-a-gtttt-t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91642 27 -     98465 ag-ttctta--aag---tgatta-----------tat-a-gtttt-t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5281 27 +     35169 ag-ttctta--aag---tgatta-----------tat-a-gtttt-t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48463 25 -     66298 AG-TTCTTAA-A-G---TAAT-C-----------ATG-C--TCTT-G
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1542 20 -     18639 ------ttc-aa-g---tgat-t-----------gtg-c--tgtt-t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5837440 25 -  28871421 CG-TTCTTAA-A-G---TGAT-T-----------GTA-c--tatt-t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3534001 25 -   4952924 CG-TTCTTAA-A-G---TGAT-T-----------GTA-c--tatt-t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18095904 20 +  38429054 ------ttg-aa-g---tgat-t-----------gtg-t--tgtt-g
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23656 26 +     91421 AG-TTCTTC--AAG---GGATTC-----------ACG-C--TGTT-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150148 26 -   7812017 AG-TTCTTC--AAG---GGATTC-----------ACG-C--TGTT-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4525 26 +     72585 ag-ttcttc--aag---ggattc-----------acg-c--tgtt-t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2910087 25 +   3329780 aa-ttctta-aa-g---tgat-t-----------gtg-t--tgtt-t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            25489 26 +     27361 ag-ttctta--aag---ggattc-----------acg-c--tgtt-t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118839 26 + 195417433 AG-TTCTTA--AAG---GGATTC-----------ACG-C--TGTT-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233097 26 -   7961872 ag-ttctta--aag---ggattc-----------acg-c--tgtt-t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71463 25 -    116970 cg-ttctta-aa-g---cgat-t-----------gta-c--tatt-t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                                939 25 +     27962 ag-ttctta--aag---tgattc-----------atg-t--g-tt-t
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              952 25 +      6077 ag-ttctta--aag---tgattc-----------atg-c--t-tt-t
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              965 25 +      5971 ag-ttctta--aag---tgattc-----------atg-t--t-tt-t
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1020 25 +      5932 AG-TTCGTA--AAC---TGATTC-----------ATG-T--T-TT-T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1166 25 -      2099 AG-TTCTTA--AAG---TGATTC-----------ATG-G--T-TT-T
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388198 25 - 209938924 ag-ttctta--aag---tgattc-----------atg-t--t-tt-t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 967 25 +      5979 AG-TTCTTA--AAG---TGATTC-----------ATG-T--T-TT-T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1351 25 -      4301 ag-ttctta--aag---tgattc-----------atg-c--t-tt-t
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235405 25 +   5703754 ag-ttctta--aag---tgattc-----------atg-t--t-tt-t
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           4995 25 +     21866 ag-ttctta--aag---tgattc-----------atg-t--t-tt-t
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113132 25 +    313613 ag-ttccta-aa-a---tgat-t-----------gca-c--tgtt-t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         21974 26 +     27374 ag-ttctta--aag---ggattc-----------acg-c--tgtt-t
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25494 26 +     58920 ag-ttctta--aag---ggattc-----------acg-c--tgtt-t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           11989 26 -     45317 ag-ttctta--aag---ggattc-----------acg-c--tgtt-t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19646 26 -     42441 AG-TTCTTA--AAG---GGATTC-----------ACG-C--TGTT-T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22328 26 -     29113 ag-ttctta--aag---ggattc-----------atg-c--tgtt-t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25397 26 -     48123 AG-TTCTTA--AAG---GGATTC-----------ACG-C--TGTT-T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855819 25 -   1910179 ag-ttctta-ta-a---tgat-t-----------ggg-c--tgtt-t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525              3543 20 -     97271 ------ttc-aa-g---tgat-t-----------gtg-c--tgtt-t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121574 20 +    196729 ------tta-ac-a---cgat-t-----------gtg-c--tgtt-g
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387559 26 +   1523678 ag-ttctta--aag---gttttc-----------atg-c--tatt-t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_231636                 490 22 +      3470 g-actctgc-ca-t---tcac-t-----------ttg-t--gg----
i Tadarida_brasiliensis.TadBra_scaffold_231636           I 272 I 8
s Tamandua_tetradactyla.TamTet_scaffold_445853                1595 21 -      2009 AA-----TTA-A-A---TAAA-T-----------GTA-C--TGTT-A
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188203 25 +    199430 ag-ttttta-aa-g---tgat-t-----------gtg-c--tgtt-t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102158 21 -    539355 ag-ttttta-aa-g---t----------------gtg-c--tgtt-t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4266 25 +      6850 AG-TTCTTA--AGC---TGATT------------GTG-C--TGTT-T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4305 25 +     20590 AG-TTCTTA--AGC---TGATT------------GTG-C--TGTT-T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349847 26 - 186847797 AG-TTCTTA--AAG---GGATTC-----------ATG-C--TGTT-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16949 21 -     31044 ag-----tt-aa-g---taaa-t-----------gtg-c--tgtt-t
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476277 25 -    610378 TG-TTCTTAA-A-A---TGAT-C-----------ATG-C--TCTT-T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        17541 26 +     26378 AG-TTCTTA--AAG---GGATTC-----------ACG-C--TGTT-T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30222 26 -     78344 AG-TTCTTA--AAG---GGATTC-----------ACG-C--TGTT-T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16862 26 +     25722 ag-ttctta--aag---ggattc-----------acg-c--tgtt-t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25085 26 -     62838 AG-TTCTTA--AAG---GGATTC-----------ACG-C--TGTT-T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25202 26 +     46913 ag-ttctta--aag---ggattc-----------acg-c--tgtt-t
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6012 26 -     28527 ag-ttctta--aag---ggattc-----------acg-c--tgtt-t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27024 26 -     64340 AG-TTCTTA--AAG---GGATTC-----------ACG-C--TGTT-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25061 26 -     63452 AG-TTCTTA--AAG---GGATTC-----------ACG-C--TGTT-T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6503 26 +     22490 ag-ttctta--aag---ggattc-----------acg-c--tgtt-t
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         4114 26 +      4141 AG-TTCTTA--AAG---GGATTC-----------ACG-C--TGTT-T
i Trachypithecus_melamera.k141_324021                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         6929 26 -     13050 ag-ttctta--aag---ggattc-----------acg-c--tgtt-t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252164 26 -   6242583 AG-TTCTTA--AAG---GGATTC-----------ACG-C--TGTT-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57896 26 +     59866 ag-ttctta--aag---ggattc-----------acg-c--tgtt-t
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830135 25 -   4065304 GA-TAGTTAA-A-G---AGAT-T-----------GTG-G--TATT-T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4687 25 -     70247 AA-TAGTTA-TA-G---AGAT-T-----------GTG-G--TATT-T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104360 25 -    105689 AA-TACCTAA-A-A---TGAT-T-----------ATA-C--TGTT-T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178432 20 +   5085361 ------ttc-ga-g---tgat-t-----------gtg-c--tctt-t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22127 27 -     30710 ag-ttttta--aag---tggttc-----------tgc-a-gtttt-c
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21034 27 -    147434 ag-ttttta--aag---tggttc-----------tgc-a-gtttt-c
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101866 20 -    112863 ------ttc-aa-g---tcat-t-----------gtg-c--tgtt-t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25702 20 -     86975 ------ttc-aa-g---tgat-t-----------gtg-c--tgtt-t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_lucifugus.GL429869.1                               378852 458 +   4330536 I
e Myotis_brandtii.KE162005.1                               9788622 460 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1255  9 +     36723 CA----------ATG----CTGT
s Acinonyx_jubatus.LLWD01001279.1                           809669  2 +   1699592 ---------------------cc
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 9
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411928  9 +  29979442 ca----------atg----ctct
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 12
s Allenopithecus_nigroviridis.k141_3755588                   44543  9 +     53615 ca----------gtg----ctgt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40363  9 +     44087 ca----------gtg----ctgt
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13067  9 -     21945 ca----------gtg----ctgt
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14745  9 +     32033 ca----------gtg----ctgt
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69307  9 -     84148 ca----------atg----ctgt
i Alouatta_belzebul.k141_1011583                         I 5 C 0
s Alouatta_caraya.k141_1109140                               41533  9 -     78289 ca----------atg----ctgt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40981  9 +     55831 ca----------atg----ctgt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39419  9 -     64179 ca----------atg----ctgt
i Alouatta_juara.k141_1687208                            I 5 C 0
s Alouatta_macconnelli.k141_361275                           21065  9 -     24835 ca----------atg----ctgt
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38048  9 +     45454 ca----------atg----ctgt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43747  9 +     70886 ca----------atg----ctgt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5871  9 +     30854 ca----------atg----ctgt
i Alouatta_puruensis.k141_251022                         I 5 C 0
s Alouatta_seniculus.k141_928287                             30010  9 +     42133 ca----------atg----ctgt
i Alouatta_seniculus.k141_928287                         I 5 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173272  9 -    412891 cc----------atg----tttt
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 6
s Aotus_azarae.k141_118258                                   47821  9 -     65372 ca----------gtg----ctgt
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41566  9 +     43593 ca----------gtg----ctgt
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669579  9 +   5030052 Ca----------gtg----ctgt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21221  9 -     23494 ca----------gtg----ctgt
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6357  9 +      8415 ca----------gtg----ctgt
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16411  9 -     45910 CA----------TTA----CTTT
i Arctocebus_calabarensis.k141_1364444                   C 0 I 9
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  1578  9 -     15198 CC----------ATG----TTTT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 6
s Ateles_geoffroyi_b.tarseq_1536                               271808  9 +  21539123 ca----------atg----ctgt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7976  9 +     48076 ca----------atg----ctgt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3113  9 -     28759 ca----------atg----ctgt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30665  9 +     44353 ca----------atg----ctgt
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46037  9 -     71267 ca----------atg----ctgt
i Ateles_marginatus.k141_970259                          I 5 C 0
s Ateles_paniscus.k141_866194                                20096  9 -     33135 ca----------atg----ctgt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3228  9 +     11645 ca----------atg----cttt
i Avahi_laniger.k141_2756659                             C 0 I 3
s Avahi_peyrierasi.k141_1823318                               3229  9 -     19611 ca----------atg----cttt
i Avahi_peyrierasi.k141_1823318                          C 0 I 3
s Cacajao_ayresi.k141_96119                                   5000  9 +     28062 ca----------atg----ctgt
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40294  9 -     91139 ca----------atg----ctgt
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17820  9 +     95584 ca----------atg----ctgt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17733  9 +    119600 ca----------atg----ctgt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7225  9 +     18648 ca----------atg----ctgt
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6909  9 -     13885 ca----------atg----ctgt
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15585  9 +     17162 ca----------atg----ctgt
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450541  9 + 189096842 CA----------ATG----CTGT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16834  9 -     18408 ca----------atg----cttt
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502234  9 +  60362399 ca----------ata----cttt
i CanFam4.chr16                                          C 0 I 9
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5864  9 -     23171 ca----------ata----cttt
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 9
s Canis_lupus_dingo.QKWQ01000480.1                          219225  9 +   9314153 ca----------ata----cttt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 9
s Canis_lupus_familiaris.chr16                            41612350  9 +  59632846 ca----------ata----cttt
i Canis_lupus_familiaris.chr16                           C 0 I 9
s Canis_lupus_orion.HG994398.1                            45103920  9 -  63665305 ca----------ata----cttt
i Canis_lupus_orion.HG994398.1                           C 0 I 9
s Carlito_syrichta.NW_007259797.1                           267599  9 +    496798 CA----------ATG----Ctat
i Carlito_syrichta.NW_007259797.1                        C 0 I 6
s Carollia_perspicillata.CarPer_scaffold_170178               1664  9 +      5315 cc----------ata----tttt
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 6
s Cebuella_niveiventris.k141_592277                           2120  9 -     12580 ca----------atg----ctgt
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40006  9 +     53515 ca----------atg----ctgt
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368207  9 -  26074798 ca----------atg----ccat
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5096  9 -     34880 ca----------atg----ccat
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64191  9 -     89041 ca----------atg----ccat
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            768  9 -      1636 CA----------ATG----CTAT
i Cephalopachus_bancanus.k141_72622                      C 0 I 6
s Ceratotherium_simum.JH767749.1                          15489210  9 -  27778364 ca----------atg----cttt
i Ceratotherium_simum.JH767749.1                         C 0 I 6
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16043  9 +     27315 ca----------atg----cttt
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 6
s Cercocebus_atys.KQ010504.1                                137706  9 -   4669795 Ca----------gtg----ctgt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41446  9 +     47900 ca----------gtg----ctgt
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41278  9 -     44860 ca----------gtg----ctgt
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41260  9 -    148725 ca----------gtg----ctgt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24322  9 -     40656 ca----------gtg----ctgt
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4257  9 +     20796 ca----------gtg----ctgt
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8512  9 -     17524 ca----------gtg----ctgt
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24201  9 -     34525 ca----------gtg----ctgt
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8911  9 -     25376 ca----------gtg----ctgt
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361477  9 -  39242232 ca----------gtg----ctgt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267221  9 +  21565898 ca----------gtg----ctgt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28675  9 -     45857 ca----------gtg----ctgt
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24466  9 -     32606 ca----------gtg----ctgt
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          653  9 +      8499 ca----------gtg----ctgt
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22165  9 +     70610 ca----------gtg----ctgt
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19030  9 +     36323 ca----------gtg----ctgc
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563             9969  9 -     19938 ca----------ttg----cttt
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 290
s Cheirogaleus_major.k141_666340                             27654  9 -     33796 ca----------acg----cttt
i Cheirogaleus_major.k141_666340                         C 0 I 3
s Cheirogaleus_medius.k141_759766                             1841  9 -     15404 ca----------aca----cttt
i Cheirogaleus_medius.k141_759766                        C 0 I 3
s Cheracebus_lucifer.k141_2312002                             6094  9 -     32913 ca----------atg----ctgt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16507  9 -     40346 ca----------atg----ctgt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16771  9 +    216457 ca----------atg----ctgt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16550  9 +     39636 ca----------atg----ctgt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            966  9 +      5346 ca----------atg----ctgt
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39639  9 -    112038 ca----------atg----ctgt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5211  9 +     34062 ca----------atg----ctgt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339926  9 +  18827391 ca----------gtg----ctgt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6537  9 -     44032 ca----------gtg----ctgt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301252  9 - 135778131 CA----------Gtg----ctgt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405819  9 -   2368649 Ca----------gtg----ctgt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374978 13 - 200372422 CA----------GTGCTGTCTGT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5703 13 -      6605 CA----------GTGCTGTCTGT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804395  9 +  53390261 cg----------tgt----tttt
i Condylura_cristata.JH655891.1                          C 0 I 6
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9513  9 +     10921 CA----------Gtg----tttt
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 I 334
s Cryptoprocta_ferox.CryFer_flattened_line_16129               899  9 +     87169 ca----------atg----ctct
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 9
s Dasypus_novemcinctus.JH564415.1                          2107306  9 -   2246927 ca----------ttg----cttt
i Dasypus_novemcinctus.JH564415.1                        C 0 I 294
s Daubentonia_madagascariensis.ctg71                        289669  9 +  12879189 ca----------atg----tttt
i Daubentonia_madagascariensis.ctg71                     C 0 I 3
s Desmodus_rotundus.KZ672289.1                            11861308  9 -  20541912 cc----------atg----tttt
i Desmodus_rotundus.KZ672289.1                           C 0 I 6
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661494  9 -   1390856 ca----------atg----cttt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 6
s Diceros_bicornis.DicBicMic_scaffold_5955                  136287  9 -    198055 ca----------atg----cttt
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 6
s Eidolon_helvum.AWHC01266696.1                               2882  9 +     19438 CA----------ATG----TTTT
i Eidolon_helvum.AWHC01266696.1                          C 0 I 6
s Enhydra_lutris.KZ291758.1                               24912970  9 +  41312741 ca----------gtg----ctct
i Enhydra_lutris.KZ291758.1                              C 0 I 9
s Eptesicus_fuscus.JH977646.1                             12574688  9 +  14770903 tt----------aaa----tttt
i Eptesicus_fuscus.JH977646.1                            I 9 I 7
s Equus_asinus.JREZ01000139.1                              3038455  9 -   4378816 ca----------agg----cgtt
i Equus_asinus.JREZ01000139.1                            C 0 I 5
s Equus_caballus.CM000403.2                               21372389  9 +  39960074 ca----------agg----cgtt
i Equus_caballus.CM000403.2                              C 0 I 5
s Equus_przewalskii.KK951119.1                              409175  9 -    498745 ca----------agg----cgtt
i Equus_przewalskii.KK951119.1                           C 0 I 5
s Erythrocebus_patas.Contig38                               259484  9 +  21539334 ca----------gtg----ctgt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243327  9 - 206538554 ca----------atg----ctct
i Felis_catus.CM001381.2                                 C 0 I 9
s Felis_catus_fca126.CM031415.1                          185113109  9 - 205367284 ca----------atg----ctct
i Felis_catus_fca126.CM031415.1                          C 0 I 9
s Felis_nigripes.FelNig_flattened_line_31944                 24457  9 -     30238 ca----------atg----ctct
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 9
s Galago_moholi.ctg3793                                     120475  9 -    137831 ca----------acg----cttt
i Galago_moholi.ctg3793                                  I 514 I 9
s Galago_senegalensis.k141_991736                             4016  9 +     22493 ca----------acg----cttt
i Galago_senegalensis.k141_991736                        I 515 I 9
s Galagoides_demidoff.k141_561628                            17491  9 +     32986 ca----------atg----cttc
i Galagoides_demidoff.k141_561628                        I 521 I 9
s Galeopterus_variegatus.GalVar_scaffold_74466               16077  9 +     18121 ca----------gtg----cttt
i Galeopterus_variegatus.GalVar_scaffold_74466           I 272 I 6
s Gorilla_beringei.k141_3358147                               1609  9 -      8343 ca----------atg----ctgt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 67160  9 +  33314783 ca----------atg----ctgt
i Gorilla_gorilla.LT578336.1                             C 0 I 271
s Helogale_parvula.HelPar_flattened_line_2585                27433  9 -    327341 cg----------atg----ctct
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 9
s Hipposideros_armiger.JXIK01000431.1                      1546752  9 -   1711038 ta----------atg----cttt
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 6
s Hipposideros_galeritus.HipGal_scaffold_23202               46071  9 +     49977 TA----------ATG----CTTT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 6
s Hoolock_leuconedys.ctg274                                    139002  9 -    630532 ca----------atg----ctgt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65891  9 +     83186 CG----------ATA----CTCT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 9
s Hylobates_agilis.k141_1155965                               2036  9 +     12352 ca----------atg----ctgt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9219  9 +     55766 ca----------atg----ctgt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048557  9 + 191637585 ca----------atg----ctgt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797889  9 +  11177569 ca----------atg----ctgt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     721  9 -      1527 ca----------gtg----cttt
i Indri_indri.k141_4600452                               C 0 I 3
s Lagothrix_lagothricha.k141_246028                          40355  9 +    110728 ca----------atg----ctgt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1046  9 -     13097 CA----------ATG----CTGT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                            997  9 +      5940 CA----------ATG----CTGT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         628  9 -      5717 ca----------atg----ctgt
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7257  9 -     11567 ca----------atg----ctgt
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8638  9 -     12945 ca----------atg----ctgt
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6014  9 +     29618 ca----------acg----cttt
i Lepilemur_ankaranensis.k141_567626                     C 0 I 3
s Lepilemur_dorsalis.k141_387009                              6011  9 +     31569 ca----------acg----cttt
i Lepilemur_dorsalis.k141_387009                         C 0 I 3
s Lepilemur_ruficaudatus.k141_330196                          6023  9 +     24756 ca----------acg----cttt
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 3
s Lepilemur_septentrionalis.k141_360456                       6015  9 +     16388 ca----------acg----cttt
i Lepilemur_septentrionalis.k141_360456                  C 0 I 3
s Leptonychotes_weddellii.KB714746.1                        810324  9 -   3914936 ca----------atg----ttct
i Leptonychotes_weddellii.KB714746.1                     C 0 I 9
s Lophocebus_aterrimus.ctg367                               329661  9 -   1826925 ca----------gtg----ctgt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2972  9 +     19643 GA----------ATG----CTTT
i Loris_lydekkerianus.k141_2031736                       C 0 I 9
s Loris_tardigradus.ctg83                                  5036631  9 -   6120653 CA----------ATG----CTTT
i Loris_tardigradus.ctg83                                C 0 I 9
s Loxodonta_africana.GL010049.1                           39077407 19 +  43346337 taaactctcccttta----tttc
i Loxodonta_africana.GL010049.1                          C 0 I 666
s Lycaon_pictus.CM007581.1                                41611505  9 +  59628241 ca----------ata----cttt
i Lycaon_pictus.CM007581.1                               C 0 I 9
s Macaca_arctoides.k141_1757516                              41943  9 -     61512 ca----------gtg----ctgt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369571  9 -  60120075 ca----------gtg----ctgt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21891  9 +     30207 ca----------gtg----ctgt
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           18994  9 -     24934 ca----------gtg----ctgt
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21777  9 +     30527 ca----------gtg----ctgt
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32967  9 -     50087 ca----------gtg----ctgt
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42705  9 +     51645 ca----------gtg----ctgt
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411279  9 - 187317192 Ca----------gtg----ctgt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396162  9 +  25927173 Ca----------gtg----ctgt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45293  9 -     62418 ca----------gtg----ctgt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21981  9 +     24253 ca----------gtg----ctgt
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41738  9 +     59329 ca----------gtg----ctgt
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267570  9 +    668171 ca----------gtg----ctgt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18916  9 +     21031 ca----------gtg----gtgt
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32649  9 +     33478 ca----------gtg----ctgt
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219832  9 -    270270 NN----------NNN----NNNN
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 6
s Mandrillus_leucophaeus.scaffold280                        319044  9 +  24302211 ca----------gtg----ctgt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353876  9 -    752769 ca----------gtg----ctgt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670539  9 -    737560 ca----------atg----cttt
i Manis_javanica.JSZB01003497.1                          C 0 I 6
s Manis_pentadactyla.KN006162.1                             217834  9 +    317179 ca----------atg----cttt
i Manis_pentadactyla.KN006162.1                          C 0 I 6
s Megaderma_lyra.MegLyr_scaffold_4542                       147012  9 +    207569 ca----------gtg----cttt
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 6
s Mellivora_capensis.MelCap_flattened_line_19308             22839  9 -     74585 ca----------atg----ctct
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 9
s Mico_argentatus.k141_582562                                 7008  9 +     17804 ca----------atg----ctgt
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7781  9 -     12984 ca----------atg----ctgt
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15743  9 -     26561 ca----------atg----ctgt
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981623  9 +  93316391 CA----------ACA----CTTT
i Microcebus_murinus.CM007674.1                          C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_2233                181242  9 +    200668 CC----------ATG----TTTT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 6
s Miniopterus_natalensis.LDJU01000308.1                     494441  9 -   1897963 aa----------ata----ttta
i Miniopterus_natalensis.LDJU01000308.1                  I 8 I 6
s Miniopterus_schreibersii.MinSch_scaffold_3531             133876  9 +    183988 aa----------ata----ttta
i Miniopterus_schreibersii.MinSch_scaffold_3531          I 8 I 6
s Miopithecus_ogouensis.k141_1534655                         19037  9 -     27822 ca----------gtg----ctgt
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5333  9 +     27589 ca----------atg----ctct
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 9
s Mirza_zaza.k141_766280                                     49481  9 -     62432 ca----------acg----cttt
i Mirza_zaza.k141_766280                                 C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175427  9 +    366855 AC----------ATG----CTTT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 6
s Mungos_mungo.MunMun_flattened_line_18455                   15187  9 -     63510 tg----------atg----ctct
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 9
s Murina_feae.MurFea_scaffold_17764                          34587  9 +     47283 TA----------TAA----TTCT
i Murina_feae.MurFea_scaffold_17764                      I 9 I 7
s Mustela_putorius.JH418006.1                             14351778  9 +  14710649 ca----------gtg----ctct
i Mustela_putorius.JH418006.1                            C 0 I 9
s Myotis_davidii.KB100139.1                                4383224  9 +   6019432 tt----------taa----tttt
i Myotis_davidii.KB100139.1                              I 9 I 7
s Myotis_myotis.MyoMyo_scaffold_185951                        3195  9 +      3929 TT----------TCA----TTTT
i Myotis_myotis.MyoMyo_scaffold_185951                   I 9 I 7
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              116747  9 +    130748 CA----------TTG----CTTT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 283
s Nasalis_larvatus.k141_1350636                              25357  7 +     34575 ca----------gtg----ct--
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465718  9 -  31847680 ca----------atg----ctct
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 9
s Noctilio_leporinus.NocLep_scaffold_7894                   124096  9 -    149072 CA----------ATG----CTTT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 7
s Nomascus_annamensis.k141_1771965                           50298  9 -    132029 ca----------atg----ctgt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6394  9 -     16345 ca----------atg----ctgt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12277  9 +     22201 ca----------atg----ctgt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410614  9 -  22158432 ca----------atg----ctgt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22677  9 -     54323 ca----------atg----ctgt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195120  9 +   9404916 ca----------ata----cttt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 9
s Nycticebus_bengalensis.LG01                             93631747  9 + 196305487 CA----------ATG----TTTT
i Nycticebus_bengalensis.LG01                            C 0 I 9
s Nycticebus_coucang.k141_8166032                             1136  9 +      2758 CA----------ATG----TTTT
i Nycticebus_coucang.k141_8166032                        C 0 I 9
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560001  9 - 199412804 CA----------ATG----CTTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 9
s Odobenus_rosmarus.KB229312.1                             1448502  9 +   2017862 ca----------atg----ctct
i Odobenus_rosmarus.KB229312.1                           C 0 I 9
s Otocyon_megalotis.JAEUCK010005147.1                        36168  9 +    559221 ca----------ata----cttt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 9
s Otolemur_crassicaudatus.k141_649260                        35606  9 -     51505 ca----------aag----cttt
i Otolemur_crassicaudatus.k141_649260                    N 0 I 9
s Otolemur_garnettii.GL873799.1                             348621  9 +   1103335 CA----------ATG----CTTt
i Otolemur_garnettii.GL873799.1                          I 821 I 9
s Pan_troglodytes.CM009242.2                               1468498  9 - 189151597 ca----------atg----ctgt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21047  9 -    230217 ca----------atg----ctct
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 9
s Panthera_pardus.KV860321.1                              18458373  9 -  18783137 ca----------atg----ctct
i Panthera_pardus.KV860321.1                             C 0 I 9
s Panthera_tigris.KE722367.1                               3969098  9 +   8748460 ca----------atg----ctct
i Panthera_tigris.KE722367.1                             C 0 I 9
s Papio_anubis.CM001495.2                                   239889  9 - 183742232 ca----------gtg----ctgt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6355  9 +     21308 ca----------gtg----ctgt
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287392  9 -  20919399 ca----------gtg----ctgt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19008  9 -     27687 ca----------gtg----ctgt
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12144  9 +     16796 ca----------gtg----ctgt
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18954  9 -     23640 ca----------gtg----ctgt
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11962  9 +     78924 tg----------gtg----ctct
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 9
s Perodicticus_ibeanus.k141_1921260                          21855  9 +     31479 CA----------ATG----CTTC
i Perodicticus_ibeanus.k141_1921260                      C 0 I 9
s Perodicticus_potto.k141_1854441                            14225  9 -     24908 CA----------ATG----CTTC
i Perodicticus_potto.k141_1854441                        C 0 I 9
s Piliocolobus_badius.k141_2495623                            5811  9 +      7560 ca----------gtg----ctgt
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61518  9 -     63152 CA----------GTG----CTGT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44117  9 +     45295 ca----------gtg----ctgt
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1796  9 +      5735 Ca----------gtg----ctgt
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             61990  9 +    207309 ca----------atg----ctgt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3110  9 -     25401 ca----------atg----ctgt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28825  9 +     58159 ca----------atg----ctgt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29101  9 +     63561 ca----------atg----ctgt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28864  9 +     51148 ca----------atg----ctgt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553857  9 -   4542175 ca----------atg----ctgt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28848  9 +     51125 ca----------atg----ctgt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5268  9 +     39866 ca----------atg----ctgt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           355  9 -      9282 ca----------atg----ctgt
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39756  9 -     87950 ca----------atg----ctgt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40149  9 -     88961 ca----------atg----ctgt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4848  9 -     39403 ca----------atg----ctgt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39802  9 +     87928 ca----------atg----ctgt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4846  9 -     60166 ca----------atg----ctgt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11782  9 -     67232 ca----------atg----ctgt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39698  9 -     90634 ca----------atg----ctgt
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41166  9 +     89403 ca----------atg----ctgt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174115  9 - 189387572 ca----------atg----ctgt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189113  9 -   9816681 ca----------atg----ctgt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24294  9 +     69807 CA----------GTG----CTGT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41489  9 -     80239 ca----------gtg----ctgt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563103  9 -   2598838 CA----------ATG----CTTT
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 3
s Propithecus_coronatus.k141_209299                            741  9 -      7103 ca----------atg----cttt
i Propithecus_coronatus.k141_209299                      C 0 I 3
s Propithecus_diadema.k141_153680                             1338  9 -     11706 ca----------ctg----cttt
i Propithecus_diadema.k141_153680                        C 0 I 3
s Propithecus_edwardsi.k141_635656                            5073  9 -     30655 ca----------atg----cttt
i Propithecus_edwardsi.k141_635656                       C 0 I 3
s Propithecus_perrieri.k141_1496898                          31398  9 +     46564 ca----------atg----cttt
i Propithecus_perrieri.k141_1496898                      C 0 I 3
s Propithecus_tattersalli.k141_1127767                       91669  9 -     98465 ca----------atg----cttt
i Propithecus_tattersalli.k141_1127767                   C 0 I 3
s Propithecus_verreauxi.k141_1047036                          5308  9 +     35169 ca----------atg----cttt
i Propithecus_verreauxi.k141_1047036                     C 0 I 3
s Pteronotus_parnellii.KE847780.1                            48488  9 -     66298 Cc----------atg----cttt
i Pteronotus_parnellii.KE847780.1                        C 0 I 6
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1562  9 -     18639 ca----------gtg----ctct
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 9
s Pteropus_alecto.KB030862.1                               5837465  9 -  28871421 ca----------atg----tttt
i Pteropus_alecto.KB030862.1                             C 0 I 6
s Pteropus_vampyrus.KN525825.1                             3534026  9 -   4952924 ca----------atg----tttt
i Pteropus_vampyrus.KN525825.1                           C 0 I 6
s Puma_concolor.QAVW01001104.1                            18095924  9 +  38429054 ca----------atg----ctct
i Puma_concolor.QAVW01001104.1                           C 0 I 9
s Pygathrix_cinerea.k141_1153803                             23682  9 +     91421 CA----------GTG----CTGT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150174  9 -   7812017 CA----------GTG----CTGT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4551  9 +     72585 ca----------gtg----ctgt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2910112  9 +   3329780 ca----------atg----cttt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 6
s Rhinopithecus_bieti.k119_221883                            25515  9 +     27361 ca----------gtg----ctgt
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118865  9 + 195417433 Ca----------gtg----ctgt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233123  9 -   7961872 ca----------gtg----ctgt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71488  9 -    116970 ca----------atg----tttt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 6
s Saguinus_bicolor.k141_1429097                                964  9 +     27962 ca----------atg----ctgt
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              977  9 +      6077 ca----------atg----ctgt
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                              990  9 +      5971 ca----------atg----ctgt
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1045  9 +      5932 CA----------ATG----CTGT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1191  9 -      2099 CA----------ATG----CTGT
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388223  9 - 209938924 ca----------atg----ctgt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                 992  9 +      5979 CA----------ATG----CTGT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1376  9 -      4301 ca----------atg----ctgt
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235430  9 +   5703754 ca----------ata----ccat
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5020  9 +     21866 ca----------ata----ccat
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113157  9 +    313613 ca----------atg----tttt
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 6
s Semnopithecus_entellus.k141_158471                         22000  9 +     27374 ca----------gtg----ctgt
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25520  9 +     58920 ca----------gtg----ctgt
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12015  9 -     45317 ca----------gtg----ctgt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19672  9 -     42441 CA----------GTG----CTGT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22354  9 -     29113 ca----------gtg----ctgt
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25423  9 -     48123 CA----------GTG----CTGT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855846  9 -   1910179 ca----------atg----tttt
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 I 6
s Spilogale_gracilis.SpiGra_flattened_line_13525              3563  9 -     97271 ca----------gtg----ctct
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 9
s Suricata_suricatta.SurSur_flattened_line_6629             121594  9 +    196729 cg----------atg----ctct
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 9
s Symphalangus_syndactylus.tarseq_199                       387585  9 +   1523678 ca----------atg----ctgt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_231636                 520  9 +      3470 aa----------ata----tttc
i Tadarida_brasiliensis.TadBra_scaffold_231636           I 8 I 6
s Tamandua_tetradactyla.TamTet_scaffold_445853                1616  9 -      2009 CA----------TTG----CTTT
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 I 285
s Tapirus_indicus.TapInd_scaffold_7432                      188228  9 +    199430 ca----------atg----cttt
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 5
s Tapirus_terrestris.TapTer_scaffold_755                    102179  9 -    539355 cg----------atg----cttt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 5
s Tarsius_lariang.k141_1780720                                4291  9 +      6850 CA----------ATG----CTAT
i Tarsius_lariang.k141_1780720                           C 0 I 6
s Tarsius_wallacei.k141_226975                                4330  9 +     20590 CA----------ATG----CTAT
i Tarsius_wallacei.k141_226975                           C 0 I 6
s Theropithecus_gelada.CM009954.1                           349873  9 - 186847797 Ca----------gtg----ctgt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   16970  9 -     31044 ca----------ttg----cttt
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 291
s Tonatia_saurophila.TonSau_scaffold_294                    476302  9 -    610378 CC----------ATG----TTTT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 6
s Trachypithecus_auratus.k141_1189070                        17567  9 +     26378 CA----------GTG----CTGT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30248  9 -     78344 CA----------GTG----CTGT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16888  9 +     25722 ca----------gtg----ctgt
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25111  9 -     62838 CA----------GTG----CTGT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25228  9 +     46913 ca----------gtg----ctgt
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6038  9 -     28527 ca----------gtg----ctgt
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27050  9 -     64340 CA----------GTG----CTGT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25087  9 -     63452 CA----------GTG----CTGT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6529  9 +     22490 ca----------gtg----ctgt
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_324021                         4140  1 +      4141 C----------------------
i Trachypithecus_melamera.k141_324021                    C 0 N 0
s Trachypithecus_obscurus.k141_848057                         6955  9 -     13050 ca----------gtg----ctgt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252190  9 -   6242583 CA----------GTG----CTGT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57922  9 +     59866 ca----------gtg----ctgt
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830160  9 -   4065304 TA----------ATg----cttc
i Tupaia_chinensis.KB320699.1                            C 0 I 6
s Tupaia_tana.TupTan_flattened_line_394                       4712  9 -     70247 TA----------ATG----CTTT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 6
s Uropsilus_gracilis.UroGra_scaffold_7153                   104385  9 -    105689 CA----------ATA----TTTT
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 6
s Ursus_maritimus.KK499267.1                                178452  9 +   5085361 ca----------acg----ctct
i Ursus_maritimus.KK499267.1                             C 0 I 12
s Varecia_rubra.k141_787544                                  22154  9 -     30710 ca----------atg----tttt
i Varecia_rubra.k141_787544                              C 0 I 3
s Varecia_variegata.k141_289850                              21061  9 -    147434 ca----------atg----tttt
i Varecia_variegata.k141_289850                          C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_12041                101886  9 -    112863 ca----------ata----cttt
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 9
s Zalophus_californianus.ZalCal_flattened_line_17732         25722  9 -     86975 ca----------atg----ctct
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 9
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_lucifugus.GL429869.1                               378852 458 +   4330536 I
e Myotis_brandtii.KE162005.1                               9788622 460 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1264 2 +     36723 C-T
s Acinonyx_jubatus.LLWD01001279.1                           809680 1 +   1699592 c--
i Acinonyx_jubatus.LLWD01001279.1                        I 9 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411949 1 +  29979442 c--
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 12 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44552 2 +     53615 c-t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40372 2 +     44087 c-t
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13076 2 -     21945 c-t
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14754 2 +     32033 c-t
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69316 2 -     84148 c-g
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41542 2 -     78289 c-g
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40990 2 +     55831 c-g
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39428 2 -     64179 c-g
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21074 2 -     24835 c-g
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38057 2 +     45454 c-g
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43756 2 +     70886 c-g
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5880 2 +     30854 c-g
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30019 2 +     42133 c-g
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173287 1 -    412891 c--
i Anoura_caudifer.AnoCau_scaffold_1412                   I 6 I 3
s Aotus_azarae.k141_118258                                   47830 2 -     65372 t-g
i Aotus_azarae.k141_118258                               C 0 I 1
s Aotus_griseimembra.k141_982342                             41575 2 +     43593 t-g
i Aotus_griseimembra.k141_982342                         C 0 I 1
s Aotus_nancymaae.KZ198451.1                                669588 2 +   5030052 t-g
i Aotus_nancymaae.KZ198451.1                             C 0 I 1
s Aotus_trivirgatus.k141_192090                              21230 2 -     23494 t-g
i Aotus_trivirgatus.k141_192090                          C 0 I 1
s Aotus_vociferans.k141_944972                                6366 2 +      8415 t-g
i Aotus_vociferans.k141_944972                           C 0 I 1
s Arctocebus_calabarensis.k141_1364444                       16429 2 -     45910 T-T
i Arctocebus_calabarensis.k141_1364444                   I 9 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  1593 1 -     15198 C--
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 6 I 3
s Ateles_geoffroyi_b.tarseq_1536                               271817 2 +  21539123 c-g
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7985 2 +     48076 c-a
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3122 2 -     28759 c-g
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30674 2 +     44353 c-g
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46046 2 -     71267 c-g
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20105 2 -     33135 c-g
i Ateles_paniscus.k141_866194                            C 0 C 0
s Cacajao_ayresi.k141_96119                                   5009 2 +     28062 g-g
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40303 2 -     91139 g-g
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17829 2 +     95584 g-g
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17742 2 +    119600 g-g
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7234 2 +     18648 c-g
i Callibella_humilis.k141_1233062                        C 0 I 1
s Callimico_goeldii.k141_1609886                              6918 2 -     13885 c-g
i Callimico_goeldii.k141_1609886                         C 0 I 1
s Callithrix_geoffroyi.k119_473390                           15594 2 +     17162 c-g
i Callithrix_geoffroyi.k119_473390                       C 0 I 2
s Callithrix_jacchus.pat_scaffold_3                      165450550 2 + 189096842 C-G
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 1
s Callithrix_kuhlii.k119_404482                              16843 2 -     18408 c-g
i Callithrix_kuhlii.k119_404482                          C 0 I 1
s CanFam4.chr16                                           42502252 1 +  60362399 c--
i CanFam4.chr16                                          I 9 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5882 1 -     23171 c--
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 9 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219243 1 +   9314153 c--
i Canis_lupus_dingo.QKWQ01000480.1                       I 9 C 0
s Canis_lupus_familiaris.chr16                            41612368 1 +  59632846 c--
i Canis_lupus_familiaris.chr16                           I 9 C 0
s Canis_lupus_orion.HG994398.1                            45103938 1 -  63665305 c--
i Canis_lupus_orion.HG994398.1                           I 9 C 0
s Carlito_syrichta.NW_007259797.1                           267614 2 +    496798 t-t
i Carlito_syrichta.NW_007259797.1                        I 6 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               1679 1 +      5315 c--
i Carollia_perspicillata.CarPer_scaffold_170178          I 6 I 3
s Cebuella_niveiventris.k141_592277                           2129 2 -     12580 c-g
i Cebuella_niveiventris.k141_592277                      C 0 I 1
s Cebuella_pygmaea.k141_145798                               40015 2 +     53515 c-g
i Cebuella_pygmaea.k141_145798                           C 0 I 1
s Cebus_albifrons.Contig27                                  368216 2 -  26074798 c-g
i Cebus_albifrons.Contig27                               C 0 I 1
s Cebus_olivaceus.k141_1404781                                5105 2 -     34880 c-g
i Cebus_olivaceus.k141_1404781                           C 0 I 1
s Cebus_unicolor.k141_1654760                                64200 2 -     89041 c-g
i Cebus_unicolor.k141_1654760                            C 0 I 1
s Cephalopachus_bancanus.k141_72622                            783 2 -      1636 T-T
i Cephalopachus_bancanus.k141_72622                      I 6 C 0
s Cercocebus_atys.KQ010504.1                                137715 2 -   4669795 c-t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41455 2 +     47900 c-t
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41287 2 -     44860 c-t
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41269 2 -    148725 c-t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24331 2 -     40656 c-t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4266 2 +     20796 c-t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8521 2 -     17524 c-t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24210 2 -     34525 c-t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8920 2 -     25376 c-t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361486 2 -  39242232 c-t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267230 2 +  21565898 c-t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28684 2 -     45857 c-t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24475 2 -     32606 c-t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          662 2 +      8499 c-t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22174 2 +     70610 c-t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19039 2 +     36323 c-t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10268 1 -     19938 c--
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 290 C 0
s Cheracebus_lucifer.k141_2312002                             6103 2 -     32913 g-g
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16516 2 -     40346 g-g
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16780 2 +    216457 g-g
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16559 2 +     39636 g-g
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            975 2 +      5346 c-g
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39648 2 -    112038 g-g
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5220 2 +     34062 g-g
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339935 2 +  18827391 c-t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6546 2 -     44032 c-t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301261 2 - 135778131 c-t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405828 2 -   2368649 c-t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374991 2 - 200372422 C-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5716 2 -      6605 C-T
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804410 1 +  53390261 t--
i Condylura_cristata.JH655891.1                          I 6 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9856 1 +     10921 t--
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 334 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129               917 1 +     87169 c--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 9 C 0
s Dasypus_novemcinctus.JH564415.1                          2107609 1 -   2246927 c--
i Dasypus_novemcinctus.JH564415.1                        I 294 C 0
s Desmodus_rotundus.KZ672289.1                            11861323 1 -  20541912 c--
i Desmodus_rotundus.KZ672289.1                           I 6 I 3
s Eidolon_helvum.AWHC01266696.1                               2897 1 +     19438 C--
i Eidolon_helvum.AWHC01266696.1                          I 6 I 3
s Elephantulus_edwardii.JH947257.1                         9098631 1 -  10337057 C--
i Elephantulus_edwardii.JH947257.1                       N 0 C 0
s Enhydra_lutris.KZ291758.1                               24912988 1 +  41312741 c--
i Enhydra_lutris.KZ291758.1                              I 9 C 0
s Eptesicus_fuscus.JH977646.1                             12574704 1 +  14770903 c--
i Eptesicus_fuscus.JH977646.1                            I 7 I 34
s Equus_asinus.JREZ01000139.1                              3038469 1 -   4378816 t--
i Equus_asinus.JREZ01000139.1                            I 5 C 0
s Equus_caballus.CM000403.2                               21372403 1 +  39960074 t--
i Equus_caballus.CM000403.2                              I 5 C 0
s Equus_przewalskii.KK951119.1                              409189 1 -    498745 t--
i Equus_przewalskii.KK951119.1                           I 5 C 0
s Erythrocebus_patas.Contig38                               259493 2 +  21539334 c-t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243345 1 - 206538554 c--
i Felis_catus.CM001381.2                                 I 9 C 0
s Felis_catus_fca126.CM031415.1                          185113127 1 - 205367284 c--
i Felis_catus_fca126.CM031415.1                          I 9 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24475 1 -     30238 c--
i Felis_nigripes.FelNig_flattened_line_31944             I 9 C 0
s Galago_moholi.ctg3793                                     120493 2 -    137831 t-t
i Galago_moholi.ctg3793                                  I 9 C 0
s Galago_senegalensis.k141_991736                             4034 2 +     22493 t-t
i Galago_senegalensis.k141_991736                        I 9 C 0
s Galagoides_demidoff.k141_561628                            17509 2 +     32986 t-t
i Galagoides_demidoff.k141_561628                        I 9 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16092 2 +     18121 c-a
i Galeopterus_variegatus.GalVar_scaffold_74466           I 6 C 0
s Gorilla_beringei.k141_3358147                               1618 2 -      8343 c-t
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251118 1 - 186649187 c--
i Gorilla_gorilla.LT578341.1                             I 35 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27451 1 -    327341 c--
i Helogale_parvula.HelPar_flattened_line_2585            I 9 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546767 1 -   1711038 c--
i Hipposideros_armiger.JXIK01000431.1                    I 6 I 3
s Hipposideros_galeritus.HipGal_scaffold_23202               46086 1 +     49977 C--
i Hipposideros_galeritus.HipGal_scaffold_23202           I 6 I 3
s Hoolock_leuconedys.ctg274                                    139011 2 -    630532 c-t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65909 1 +     83186 G--
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 9 C 0
s Hylobates_agilis.k141_1155965                               2045 2 +     12352 c-t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9228 2 +     55766 c-t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048566 2 + 191637585 c-t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797898 2 +  11177569 c-t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40364 2 +    110728 c-g
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1055 2 -     13097 C-G
i Leontocebus_fuscicollis.k141_2994775                   C 0 I 1
s Leontocebus_illigeri.k141_2951200                           1006 2 +      5940 C-G
i Leontocebus_illigeri.k141_2951200                      C 0 I 1
s Leontocebus_nigricollis.k141_3905062                         637 2 -      5717 t-g
i Leontocebus_nigricollis.k141_3905062                   C 0 I 1
s Leontopithecus_chrysomelas.k141_1327670                     7266 2 -     11567 t-g
i Leontopithecus_chrysomelas.k141_1327670                C 0 I 1
s Leontopithecus_rosalia.k141_349454                          8647 2 -     12945 t-g
i Leontopithecus_rosalia.k141_349454                     C 0 I 1
s Leptonychotes_weddellii.KB714746.1                        810342 1 -   3914936 c--
i Leptonychotes_weddellii.KB714746.1                     I 9 C 0
s Lophocebus_aterrimus.ctg367                               329670 2 -   1826925 c-t
i Lophocebus_aterrimus.ctg367                            C 0 I 1
s Loris_lydekkerianus.k141_2031736                            2990 2 +     19643 T-T
i Loris_lydekkerianus.k141_2031736                       I 9 C 0
s Loris_tardigradus.ctg83                                  5036649 2 -   6120653 T-T
i Loris_tardigradus.ctg83                                I 9 C 0
s Lycaon_pictus.CM007581.1                                41611523 1 +  59628241 c--
i Lycaon_pictus.CM007581.1                               I 9 C 0
s Macaca_arctoides.k141_1757516                              41952 2 -     61512 c-t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369580 2 -  60120075 c-t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21900 2 +     30207 c-t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19003 2 -     24934 c-t
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21786 2 +     30527 c-t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32976 2 -     50087 c-t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42714 2 +     51645 c-t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411288 2 - 187317192 c-t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396171 2 +  25927173 c-t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45302 2 -     62418 c-t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21990 2 +     24253 c-t
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41747 2 +     59329 c-t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267579 2 +    668171 c-t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18925 2 +     21031 c-t
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32658 2 +     33478 c-t
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219847 1 -    270270 C--
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 6 I 3
s Mandrillus_leucophaeus.scaffold280                        319053 2 +  24302211 c-t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353885 2 -    752769 c-t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670554 1 -    737560 c--
i Manis_javanica.JSZB01003497.1                          I 6 C 0
s Manis_pentadactyla.KN006162.1                             217849 1 +    317179 c--
i Manis_pentadactyla.KN006162.1                          I 6 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       147027 1 +    207569 c--
i Megaderma_lyra.MegLyr_scaffold_4542                    I 6 I 3
s Mellivora_capensis.MelCap_flattened_line_19308             22857 1 -     74585 c--
i Mellivora_capensis.MelCap_flattened_line_19308         I 9 C 0
s Mico_argentatus.k141_582562                                 7017 2 +     17804 c-g
i Mico_argentatus.k141_582562                            C 0 I 1
s Mico_humeralifer.k141_1180625                               7790 2 -     12984 c-g
i Mico_humeralifer.k141_1180625                          C 0 I 1
s Mico_schneideri.k141_1877700                                     15752 2 -     26561 c-g
i Mico_schneideri.k141_1877700                                 C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_2233                181257 1 +    200668 C--
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 6 I 3
s Miniopterus_natalensis.LDJU01000308.1                     494456 1 -   1897963 c--
i Miniopterus_natalensis.LDJU01000308.1                  I 6 I 20
s Miniopterus_schreibersii.MinSch_scaffold_3531             133891 1 +    183988 c--
i Miniopterus_schreibersii.MinSch_scaffold_3531          I 6 I 20
s Miopithecus_ogouensis.k141_1534655                         19046 2 -     27822 c-t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5351 1 +     27589 c--
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 9 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175442 1 +    366855 C--
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 6 I 3
s Mungos_mungo.MunMun_flattened_line_18455                   15205 1 -     63510 c--
i Mungos_mungo.MunMun_flattened_line_18455               I 9 C 0
s Murina_feae.MurFea_scaffold_17764                          34603 1 +     47283 C--
i Murina_feae.MurFea_scaffold_17764                      I 7 I 32
s Mustela_putorius.JH418006.1                             14351796 1 +  14710649 c--
i Mustela_putorius.JH418006.1                            I 9 C 0
s Myotis_davidii.KB100139.1                                4383240 1 +   6019432 c--
i Myotis_davidii.KB100139.1                              I 7 I 234
s Myotis_myotis.MyoMyo_scaffold_185951                        3211 1 +      3929 C--
i Myotis_myotis.MyoMyo_scaffold_185951                   I 7 I 125
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117039 1 +    130748 c--
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 283 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465736 1 -  31847680 c--
i Neomonachus_schauinslandi.NINY01007730.1               I 9 C 0
s Nomascus_annamensis.k141_1771965                           50307 2 -    132029 c-t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6403 2 -     16345 c-t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12286 2 +     22201 c-t
i Nomascus_gabriellae.k141_57920                         C 0 I 1
s Nomascus_siki_b.tarseq_93                            8410623 2 -  22158432 c-t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22686 2 -     54323 c-t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195138 1 +   9404916 c--
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 9 C 0
s Nycticebus_bengalensis.LG01                             93631765 2 + 196305487 T-T
i Nycticebus_bengalensis.LG01                            I 9 C 0
s Nycticebus_coucang.k141_8166032                             1154 2 +      2758 T-T
i Nycticebus_coucang.k141_8166032                        I 9 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560019 2 - 199412804 T-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 9 C 0
s Odobenus_rosmarus.KB229312.1                             1448520 1 +   2017862 c--
i Odobenus_rosmarus.KB229312.1                           I 9 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931               5277 1 -     14239 C--
i Orycteropus_afer.OryAfe_flattened_line_171931          N 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36186 1 +    559221 c--
i Otocyon_megalotis.JAEUCK010005147.1                    I 9 C 0
s Otolemur_crassicaudatus.k141_649260                        35624 2 -     51505 t-t
i Otolemur_crassicaudatus.k141_649260                    I 9 C 0
s Otolemur_garnettii.GL873799.1                             348639 2 +   1103335 t-c
i Otolemur_garnettii.GL873799.1                          I 9 C 0
s Pan_troglodytes.CM009242.2                               1468507 2 - 189151597 c-t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21065 1 -    230217 c--
i Panthera_onca.PanOnc_flattened_line_3271               I 9 C 0
s Panthera_pardus.KV860321.1                              18458391 1 -  18783137 c--
i Panthera_pardus.KV860321.1                             I 9 C 0
s Panthera_tigris.KE722367.1                               3969116 1 +   8748460 c--
i Panthera_tigris.KE722367.1                             I 9 C 0
s Papio_anubis.CM001495.2                                   239898 2 - 183742232 c-t
i Papio_anubis.CM001495.2                                C 0 I 1
s Papio_cynocephalus.k141_1507553                             6364 2 +     21308 c-t
i Papio_cynocephalus.k141_1507553                        C 0 I 1
s Papio_hamadryas.Contig39                                  287401 2 -  20919399 c-t
i Papio_hamadryas.Contig39                               C 0 I 1
s Papio_kindae.k141_2214839                                  19017 2 -     27687 c-t
i Papio_kindae.k141_2214839                              C 0 I 1
s Papio_papio.k141_799093                                    12153 2 +     16796 c-t
i Papio_papio.k141_799093                                C 0 I 1
s Papio_ursinus.k141_2278143                                 18963 2 -     23640 c-t
i Papio_ursinus.k141_2278143                             C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11980 1 +     78924 c--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 9 C 0
s Perodicticus_ibeanus.k141_1921260                          21873 2 +     31479 T-T
i Perodicticus_ibeanus.k141_1921260                      I 9 C 0
s Perodicticus_potto.k141_1854441                            14243 2 -     24908 T-T
i Perodicticus_potto.k141_1854441                        I 9 C 0
s Piliocolobus_badius.k141_2495623                            5820 2 +      7560 c-t
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61527 2 -     63152 C-T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44126 2 +     45295 c-t
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1805 2 +      5735 c-t
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             61999 2 +    207309 g-g
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3119 2 -     25401 g-g
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28834 2 +     58159 g-g
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29110 2 +     63561 g-g
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28873 2 +     51148 g-g
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553866 2 -   4542175 g-g
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28857 2 +     51125 g-g
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5277 2 +     39866 g-g
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           364 2 -      9282 g-g
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39765 2 -     87950 g-g
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40158 2 -     88961 g-g
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4857 2 -     39403 g-g
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39811 2 +     87928 g-g
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4855 2 -     60166 g-g
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11791 2 -     67232 g-g
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39707 2 -     90634 g-g
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41175 2 +     89403 g-g
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174124 2 - 189387572 c-t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189122 2 -   9816681 c-t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24303 2 +     69807 C-T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41498 2 -     80239 c-t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48503 1 -     66298 c--
i Pteronotus_parnellii.KE847780.1                        I 6 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1580 1 -     18639 c--
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 9 C 0
s Pteropus_alecto.KB030862.1                               5837480 1 -  28871421 c--
i Pteropus_alecto.KB030862.1                             I 6 I 3
s Pteropus_vampyrus.KN525825.1                             3534041 1 -   4952924 c--
i Pteropus_vampyrus.KN525825.1                           I 6 I 3
s Puma_concolor.QAVW01001104.1                            18095942 1 +  38429054 c--
i Puma_concolor.QAVW01001104.1                           I 9 C 0
s Pygathrix_cinerea.k141_1153803                             23691 2 +     91421 C-T
i Pygathrix_cinerea.k141_1153803                         C 0 I 3
s Pygathrix_nigripes_b.ctg100                                  150183 2 -   7812017 C-T
i Pygathrix_nigripes_b.ctg100                               C 0 I 3
s Pygathrix_nigripes_a.k141_215492                              4560 2 +     72585 c-t
i Pygathrix_nigripes_a.k141_215492                         C 0 I 3
s Rhinolophus_sinicus.LVEH01000134.1                       2910127 1 +   3329780 c--
i Rhinolophus_sinicus.LVEH01000134.1                     I 6 I 3
s Rhinopithecus_bieti.k119_221883                            25524 2 +     27361 c-t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118874 2 + 195417433 c-t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233132 2 -   7961872 c-t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71503 1 -    116970 c--
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 6 I 3
s Saguinus_bicolor.k141_1429097                                973 2 +     27962 c-g
i Saguinus_bicolor.k141_1429097                          C 0 I 1
s Saguinus_geoffroyi.k141_3779887                              986 2 +      6077 c-g
i Saguinus_geoffroyi.k141_3779887                        C 0 I 1
s Saguinus_imperator.k141_1898058                              999 2 +      5971 c-g
i Saguinus_imperator.k141_1898058                        C 0 I 1
s Saguinus_inustus.k141_2469308                               1054 2 +      5932 C-G
i Saguinus_inustus.k141_2469308                          C 0 I 1
s Saguinus_labiatus.k141_1571581                              1200 2 -      2099 C-G
i Saguinus_labiatus.k141_1571581                         C 0 I 1
s Saguinus_midas.LG03                                       388232 2 - 209938924 c-g
i Saguinus_midas.LG03                                    C 0 I 1
s Saguinus_mystax.k141_8077960                                1001 2 +      5979 C-A
i Saguinus_mystax.k141_8077960                           C 0 I 1
s Saguinus_oedipus.k141_1466288                               1385 2 -      4301 c-g
i Saguinus_oedipus.k141_1466288                          C 0 I 1
s Sapajus_apella.ctg103                                     235439 2 +   5703754 c-g
i Sapajus_apella.ctg103                                  C 0 I 1
s Sapajus_macrocephalus.k141_796559                           5029 2 +     21866 c-g
i Sapajus_macrocephalus.k141_796559                      C 0 I 1
s Semnopithecus_entellus.k141_158471                         22009 2 +     27374 c-t
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25529 2 +     58920 c-t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12024 2 -     45317 c-t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19681 2 -     42441 C-T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22363 2 -     29113 c-t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25432 2 -     48123 C-T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855861 1 -   1910179 c--
i Solenodon_paradoxus.SolPar_flattened_line_126          I 6 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3581 1 -     97271 c--
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 9 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121612 1 +    196729 c--
i Suricata_suricatta.SurSur_flattened_line_6629          I 9 C 0
s Symphalangus_syndactylus.tarseq_199                       387594 2 +   1523678 c-t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_231636                 535 1 +      3470 c--
i Tadarida_brasiliensis.TadBra_scaffold_231636           I 6 I 20
s Tamandua_tetradactyla.TamTet_scaffold_445853                1910 1 -      2009 c--
i Tamandua_tetradactyla.TamTet_scaffold_445853           I 285 C 0
s Tarsius_lariang.k141_1780720                                4306 2 +      6850 T-T
i Tarsius_lariang.k141_1780720                           I 6 C 0
s Tarsius_wallacei.k141_226975                                4345 2 +     20590 T-T
i Tarsius_wallacei.k141_226975                           I 6 C 0
s Theropithecus_gelada.CM009954.1                           349882 2 - 186847797 c-t
i Theropithecus_gelada.CM009954.1                        C 0 I 1
s Tolypeutes_matacus.TolMat_scaffold_31955                   17270 1 -     31044 c--
i Tolypeutes_matacus.TolMat_scaffold_31955               I 291 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476317 1 -    610378 C--
i Tonatia_saurophila.TonSau_scaffold_294                 I 6 I 3
s Trachypithecus_auratus.k141_1189070                        17576 2 +     26378 C-T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30257 2 -     78344 C-T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16897 2 +     25722 c-t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25120 2 -     62838 C-T
i Trachypithecus_francoisi.k141_1453105                  C 0 I 3
s Trachypithecus_geei.k141_1001272                           25237 2 +     46913 c-t
i Trachypithecus_geei.k141_1001272                       C 0 I 3
s Trachypithecus_germaini.k141_57262                          6047 2 -     28527 a-t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27059 2 -     64340 C-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 3
s Trachypithecus_laotum.k141_928651                          25096 2 -     63452 C-T
i Trachypithecus_laotum.k141_928651                      C 0 I 3
s Trachypithecus_leucocephalus.k141_96450                     6538 2 +     22490 c-t
i Trachypithecus_leucocephalus.k141_96450                C 0 I 3
s Trachypithecus_obscurus.k141_848057                         6964 2 -     13050 c-t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252199 2 -   6242583 C-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57931 2 +     59866 c-t
i Trachypithecus_pileatus.k141_2862967                   C 0 I 3
s Tupaia_chinensis.KB320699.1                              1830175 2 -   4065304 c-t
i Tupaia_chinensis.KB320699.1                            I 6 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4727 2 -     70247 C-T
i Tupaia_tana.TupTan_flattened_line_394                  I 6 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104400 1 -    105689 C--
i Uropsilus_gracilis.UroGra_scaffold_7153                I 6 C 0
s Ursus_maritimus.KK499267.1                                178473 1 +   5085361 c--
i Ursus_maritimus.KK499267.1                             I 12 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101904 1 -    112863 c--
i Vulpes_lagopus.VulLag_flattened_line_12041             I 9 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25740 1 -     86975 c--
i Zalophus_californianus.ZalCal_flattened_line_17732     I 9 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Varecia_variegata.k141_289850                              21070 3 -    147434 I
e Varecia_rubra.k141_787544                                  22163 3 -     30710 I
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tapirus_terrestris.TapTer_scaffold_755                    102188 5 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      188237 5 +    199430 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113166 6 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5317 3 +     35169 I
e Propithecus_tattersalli.k141_1127767                       91678 3 -     98465 I
e Propithecus_perrieri.k141_1496898                          31407 3 +     46564 I
e Propithecus_edwardsi.k141_635656                            5082 3 -     30655 I
e Propithecus_diadema.k141_153680                             1347 3 -     11706 I
e Propithecus_coronatus.k141_209299                            750 3 -      7103 I
e Propithecus_coquerelli.NW_012148875.1                    1563112 3 -   2598838 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   124105 7 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              25364 0 +     34575 C
e Myotis_lucifugus.GL429869.1                               378852 458 +   4330536 I
e Myotis_brandtii.KE162005.1                               9788622 460 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mirza_zaza.k141_766280                                     49490 3 -     62432 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Microcebus_murinus.CM007674.1                           74981632 3 +  93316391 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6024 3 +     16388 I
e Lepilemur_ruficaudatus.k141_330196                          6032 3 +     24756 I
e Lepilemur_dorsalis.k141_387009                              6020 3 +     31569 I
e Lepilemur_ankaranensis.k141_567626                          6023 3 +     29618 I
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Indri_indri.k141_4600452                                     730 3 -      1527 I
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  136296 6 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  661503 6 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        289678 3 +  12879189 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Cheirogaleus_medius.k141_759766                             1850 3 -     15404 I
e Cheirogaleus_major.k141_666340                             27663 3 -     33796 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16052 6 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3238 3 -     19611 I
e Avahi_laniger.k141_2756659                                  3237 3 +     11645 I
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1266 1 +     36723 T
s Allenopithecus_nigroviridis.k141_3755588                   44554 1 +     53615 t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40374 1 +     44087 t
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13078 1 -     21945 t
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14756 1 +     32033 t
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69318 1 -     84148 t
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41544 1 -     78289 t
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40992 1 +     55831 t
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39430 1 -     64179 t
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21076 1 -     24835 t
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38059 1 +     45454 t
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43758 1 +     70886 t
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5882 1 +     30854 t
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30021 1 +     42133 t
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   47833 1 -     65372 t
i Aotus_azarae.k141_118258                               I 1 C 0
s Aotus_griseimembra.k141_982342                             41578 1 +     43593 t
i Aotus_griseimembra.k141_982342                         I 1 C 0
s Aotus_nancymaae.KZ198451.1                                669591 1 +   5030052 t
i Aotus_nancymaae.KZ198451.1                             I 1 C 0
s Aotus_trivirgatus.k141_192090                              21233 1 -     23494 t
i Aotus_trivirgatus.k141_192090                          I 1 C 0
s Aotus_vociferans.k141_944972                                6369 1 +      8415 t
i Aotus_vociferans.k141_944972                           I 1 C 0
s Arctocebus_calabarensis.k141_1364444                       16431 1 -     45910 C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271819 1 +  21539123 t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7987 1 +     48076 t
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30676 1 +     44353 t
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46048 1 -     71267 t
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20107 1 -     33135 t
i Ateles_paniscus.k141_866194                            C 0 C 0
s Cacajao_ayresi.k141_96119                                   5011 1 +     28062 t
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40305 1 -     91139 t
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17831 1 +     95584 t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17744 1 +    119600 t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267616 1 +    496798 c
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cebus_albifrons.Contig27                                  368219 1 -  26074798 t
i Cebus_albifrons.Contig27                               I 1 C 0
s Cebus_olivaceus.k141_1404781                                5108 1 -     34880 t
i Cebus_olivaceus.k141_1404781                           I 1 C 0
s Cebus_unicolor.k141_1654760                                64203 1 -     89041 t
i Cebus_unicolor.k141_1654760                            I 1 C 0
s Cephalopachus_bancanus.k141_72622                            785 1 -      1636 C
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137717 1 -   4669795 t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41457 1 +     47900 t
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41289 1 -     44860 t
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41271 1 -    148725 t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24333 1 -     40656 t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4268 1 +     20796 t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8523 1 -     17524 t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24212 1 -     34525 t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8922 1 -     25376 t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361488 1 -  39242232 t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267232 1 +  21565898 t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28686 1 -     45857 t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24477 1 -     32606 t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          664 1 +      8499 t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22176 1 +     70610 t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19041 1 +     36323 t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6105 1 -     32913 c
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16518 1 -     40346 c
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16782 1 +    216457 c
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16561 1 +     39636 c
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            977 1 +      5346 t
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39650 1 -    112038 t
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5222 1 +     34062 t
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339937 1 +  18827391 t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6548 1 -     44032 t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301263 1 - 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405830 1 -   2368649 t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      374993 1 - 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5718 1 -      6605 T
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Erythrocebus_patas.Contig38                               259495 1 +  21539334 t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galago_moholi.ctg3793                                     120495 1 -    137831 c
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4036 1 +     22493 c
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17511 1 +     32986 c
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16094 1 +     18121 t
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1620 1 -      8343 t
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251119 1 - 186649187 t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    139013 1 -    630532 t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               2047 1 +     12352 t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9230 1 +     55766 t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048568 1 + 191637585 t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797900 1 +  11177569 t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40366 1 +    110728 t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1058 1 -     13097 T
i Leontocebus_fuscicollis.k141_2994775                   I 1 C 0
s Leontocebus_illigeri.k141_2951200                           1009 1 +      5940 T
i Leontocebus_illigeri.k141_2951200                      I 1 C 0
s Leontocebus_nigricollis.k141_3905062                         640 1 -      5717 t
i Leontocebus_nigricollis.k141_3905062                   I 1 C 0
s Lophocebus_aterrimus.ctg367                               329673 1 -   1826925 t
i Lophocebus_aterrimus.ctg367                            I 1 C 0
s Loris_lydekkerianus.k141_2031736                            2992 1 +     19643 C
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036651 1 -   6120653 C
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_1757516                              41954 1 -     61512 t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369582 1 -  60120075 t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21902 1 +     30207 t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19005 1 -     24934 t
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21788 1 +     30527 t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32978 1 -     50087 t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42716 1 +     51645 t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411290 1 - 187317192 t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396173 1 +  25927173 t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45304 1 -     62418 t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21992 1 +     24253 t
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41749 1 +     59329 t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267581 1 +    668171 t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18927 1 +     21031 t
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32660 1 +     33478 t
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319055 1 +  24302211 t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353887 1 -    752769 t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19048 1 -     27822 t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Nasalis_larvatus.k141_1350636                              25364 1 +     34575 t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           50309 1 -    132029 t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6405 1 -     16345 t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12289 1 +     22201 t
i Nomascus_gabriellae.k141_57920                         I 1 C 0
s Nomascus_siki_b.tarseq_93                            8410625 1 -  22158432 t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22688 1 -     54323 t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93631767 1 + 196305487 C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1156 1 +      2758 C
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560021 1 - 199412804 C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        35626 1 -     51505 c
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             348641 1 +   1103335 c
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468509 1 - 189151597 t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   239901 1 - 183742232 t
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_1507553                             6367 1 +     21308 t
i Papio_cynocephalus.k141_1507553                        I 1 C 0
s Papio_hamadryas.Contig39                                  287404 1 -  20919399 t
i Papio_hamadryas.Contig39                               I 1 C 0
s Papio_kindae.k141_2214839                                  19020 1 -     27687 t
i Papio_kindae.k141_2214839                              I 1 C 0
s Papio_papio.k141_799093                                    12156 1 +     16796 t
i Papio_papio.k141_799093                                I 1 C 0
s Papio_ursinus.k141_2278143                                 18966 1 -     23640 t
i Papio_ursinus.k141_2278143                             I 1 C 0
s Perodicticus_ibeanus.k141_1921260                          21875 1 +     31479 C
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14245 1 -     24908 C
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5822 1 +      7560 t
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61529 1 -     63152 T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44128 1 +     45295 t
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1807 1 +      5735 t
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62001 1 +    207309 t
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3121 1 -     25401 t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28836 1 +     58159 t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29112 1 +     63561 t
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28875 1 +     51148 t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553868 1 -   4542175 t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28859 1 +     51125 t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5279 1 +     39866 c
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           366 1 -      9282 c
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39767 1 -     87950 c
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40160 1 -     88961 c
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4859 1 -     39403 c
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39813 1 +     87928 c
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4857 1 -     60166 g
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11793 1 -     67232 c
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39709 1 -     90634 c
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41177 1 +     89403 g
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174126 1 - 189387572 t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189124 1 -   9816681 t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24305 1 +     69807 T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41500 1 -     80239 t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23696 1 +     91421 T
i Pygathrix_cinerea.k141_1153803                         I 3 C 0
s Pygathrix_nigripes_b.ctg100                                  150188 1 -   7812017 T
i Pygathrix_nigripes_b.ctg100                               I 3 I 1
s Pygathrix_nigripes_a.k141_215492                              4565 1 +     72585 t
i Pygathrix_nigripes_a.k141_215492                         I 3 I 1
s Rhinopithecus_bieti.k119_221883                            25526 1 +     27361 t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118876 1 + 195417433 t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233134 1 -   7961872 t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                                976 1 +     27962 t
i Saguinus_bicolor.k141_1429097                          I 1 C 0
s Saguinus_geoffroyi.k141_3779887                              989 1 +      6077 t
i Saguinus_geoffroyi.k141_3779887                        I 1 C 0
s Saguinus_imperator.k141_1898058                             1002 1 +      5971 t
i Saguinus_imperator.k141_1898058                        I 1 C 0
s Saguinus_inustus.k141_2469308                               1057 1 +      5932 T
i Saguinus_inustus.k141_2469308                          I 1 C 0
s Saguinus_labiatus.k141_1571581                              1203 1 -      2099 T
i Saguinus_labiatus.k141_1571581                         I 1 C 0
s Saguinus_midas.LG03                                       388235 1 - 209938924 t
i Saguinus_midas.LG03                                    I 1 C 0
s Saguinus_mystax.k141_8077960                                1004 1 +      5979 T
i Saguinus_mystax.k141_8077960                           I 1 C 0
s Saguinus_oedipus.k141_1466288                               1388 1 -      4301 t
i Saguinus_oedipus.k141_1466288                          I 1 C 0
s Sapajus_apella.ctg103                                     235442 1 +   5703754 t
i Sapajus_apella.ctg103                                  I 1 C 0
s Sapajus_macrocephalus.k141_796559                           5032 1 +     21866 t
i Sapajus_macrocephalus.k141_796559                      I 1 C 0
s Symphalangus_syndactylus.tarseq_199                       387596 1 +   1523678 t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                4308 1 +      6850 C
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4347 1 +     20590 C
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349885 1 - 186847797 t
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Tupaia_chinensis.KB320699.1                              1830177 1 -   4065304 t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4729 1 -     70247 T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
e Orycteropus_afer.OryAfe_flattened_line_171931               5278 0 -     14239 C
e Elephantulus_edwardii.JH947257.1                         9098632 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11861324 3 -  20541912 I
e Callibella_humilis.k141_1233062                             7236 1 +     18648 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17271 0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2107610 0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10269 0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               1680 3 +      5315 I
e Zalophus_californianus.ZalCal_flattened_line_17732         25741 0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                101905 0 -    112863 C
e Ursus_maritimus.KK499267.1                                178474 0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              3582 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          1581 0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        36187 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1448521 0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195139 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11465737 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14351797 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5352 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             22858 0 -     74585 C
e Lycaon_pictus.CM007581.1                                41611524 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810343 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24912989 0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45103939 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41612369 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          219244 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     5883 0 -     23171 C
e CanFam4.chr16                                           42502253 0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  1594 3 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20411950 0 +  29979442 C
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Varecia_variegata.k141_289850                              21070 3 -    147434 I
e Varecia_rubra.k141_787544                                  22163 3 -     30710 I
e Uropsilus_gracilis.UroGra_scaffold_7153                   104401 0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       57933 3 +     59866 I
e Trachypithecus_phayrei.ctg124                             252201 0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                         6966 0 -     13050 C
e Trachypithecus_leucocephalus.k141_96450                     6540 3 +     22490 I
e Trachypithecus_laotum.k141_928651                          25098 3 -     63452 I
e Trachypithecus_hatinhensis.k141_31479                      27061 3 -     64340 I
e Trachypithecus_germaini.k141_57262                          6049 0 -     28527 C
e Trachypithecus_geei.k141_1001272                           25239 3 +     46913 I
e Trachypithecus_francoisi.k141_1453105                      25122 3 -     62838 I
e Trachypithecus_cristatus.k141_180416                       16899 0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     30259 0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        17578 0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    476318 3 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    102188 5 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      188237 5 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_445853                1911 0 -      2009 C
e Tadarida_brasiliensis.TadBra_scaffold_231636                 536 20 +      3470 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             121613 0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1855862 0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Semnopithecus_vetulus.k141_244474                          25434 0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     22365 0 -     29113 C
e Semnopithecus_priam.k141_714795                            19683 0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12026 0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      25531 0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22011 0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113166 6 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71504 3 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2910128 3 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18095943 0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3534042 3 -   4952924 I
e Pteropus_alecto.KB030862.1                               5837481 3 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            48504 3 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5317 3 +     35169 I
e Propithecus_tattersalli.k141_1127767                       91678 3 -     98465 I
e Propithecus_perrieri.k141_1496898                          31407 3 +     46564 I
e Propithecus_edwardsi.k141_635656                            5082 3 -     30655 I
e Propithecus_diadema.k141_153680                             1347 3 -     11706 I
e Propithecus_coronatus.k141_209299                            750 3 -      7103 I
e Propithecus_coquerelli.NW_012148875.1                    1563112 3 -   2598838 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11981 0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969117 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18458392 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21066 0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   124105 7 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117040 0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               378852 458 +   4330536 I
e Myotis_davidii.KB100139.1                                4383241 234 +   6019432 I
e Myotis_brandtii.KE162005.1                               9788622 460 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          34604 32 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   15206 0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 175443 3 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mirza_zaza.k141_766280                                     49490 3 -     62432 I
e Miniopterus_schreibersii.MinSch_scaffold_3531             133892 20 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     494457 20 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                181258 3 +    200668 I
e Microcebus_murinus.CM007674.1                           74981632 3 +  93316391 I
e Mico_schneideri.k141_1877700                                     15754 1 -     26561 I
e Mico_humeralifer.k141_1180625                               7792 1 -     12984 I
e Mico_argentatus.k141_582562                                 7019 1 +     17804 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       147028 3 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Manis_pentadactyla.KN006162.1                             217850 0 +    317179 C
e Manis_javanica.JSZB01003497.1                             670555 0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                219848 3 -    270270 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6024 3 +     16388 I
e Lepilemur_ruficaudatus.k141_330196                          6032 3 +     24756 I
e Lepilemur_dorsalis.k141_387009                              6020 3 +     31569 I
e Lepilemur_ankaranensis.k141_567626                          6023 3 +     29618 I
e Leontopithecus_rosalia.k141_349454                          8649 1 -     12945 I
e Leontopithecus_chrysomelas.k141_1327670                     7268 1 -     11567 I
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Indri_indri.k141_4600452                                     730 3 -      1527 I
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  65910 0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_23202               46087 3 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1546768 3 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                27452 0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 24476 0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113128 0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Equus_przewalskii.KK951119.1                              409190 0 -    498745 C
e Equus_caballus.CM000403.2                               21372404 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3038470 0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12574705 34 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               2898 3 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  136296 6 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  661503 6 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        289678 3 +  12879189 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129               918 0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_101005          9857 3 +     10921 I
e Condylura_cristata.JH655891.1                           35804411 1 +  53390261 I
e Cheirogaleus_medius.k141_759766                             1850 3 -     15404 I
e Cheirogaleus_major.k141_666340                             27663 3 -     33796 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16052 6 +     27315 I
e Cebuella_pygmaea.k141_145798                               40017 1 +     53515 I
e Cebuella_niveiventris.k141_592277                           2131 1 -     12580 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              16845 1 -     18408 I
e Callithrix_jacchus.pat_scaffold_3                      165450552 1 + 189096842 I
e Callithrix_geoffroyi.k119_473390                           15596 2 +     17162 I
e Callimico_goeldii.k141_1609886                              6920 1 -     13885 I
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3238 3 -     19611 I
e Avahi_laniger.k141_2756659                                  3237 3 +     11645 I
e Ateles_chamek.k141_615173                                   3124 0 -     28759 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      173288 3 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           809681 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       1267  4 +     36723 TTT------T
s Acinonyx_jubatus.LLWD01001279.1                           809681  3 +   1699592 -tt------t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411950  3 +  29979442 -tt------t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44555  5 +     53615 tttt-----t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40375  5 +     44087 ttt-----gt
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13079  5 -     21945 ttt-----gt
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14757  5 +     32033 ttt-----gt
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69319  4 -     84148 ttt------t
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41545  4 -     78289 ttt------t
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             40993  4 +     55831 ttt------t
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39431  4 -     64179 ttt------t
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21077  4 -     24835 ttt------t
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38060  4 +     45454 ttt------t
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43759  4 +     70886 ttt------t
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5883  4 +     30854 ttt------t
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30022  4 +     42133 ttt------t
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173291  3 -    412891 -tt------t
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Aotus_azarae.k141_118258                                   47834  4 -     65372 ttt------t
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41579  4 +     43593 ttt------t
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669592  4 +   5030052 ttt------t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21234  4 -     23494 ttt------t
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6370  4 +      8415 ttt------t
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16432  4 -     45910 TTT------T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  1597  3 -     15198 -TT------T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 3 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271820  4 +  21539123 ttt------t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7988  4 +     48076 ttt------t
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3124  4 -     28759 ttt------t
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30677  4 +     44353 ttt------t
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46049  4 -     71267 ttt------t
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20108  4 -     33135 ttt------t
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3240  3 +     11645 -ct------t
i Avahi_laniger.k141_2756659                             I 3 C 0
s Avahi_peyrierasi.k141_1823318                               3241  3 -     19611 -tt------t
i Avahi_peyrierasi.k141_1823318                          I 3 C 0
s Cacajao_ayresi.k141_96119                                   5012  4 +     28062 ttt------c
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40306  4 -     91139 ttt------c
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17832  4 +     95584 ttt------c
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17745  4 +    119600 ttt------c
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7237  4 +     18648 ttt------t
i Callibella_humilis.k141_1233062                        I 1 C 0
s Callimico_goeldii.k141_1609886                              6921  4 -     13885 ttt------t
i Callimico_goeldii.k141_1609886                         I 1 C 0
s Callithrix_geoffroyi.k119_473390                           15598  4 +     17162 ttt------t
i Callithrix_geoffroyi.k119_473390                       I 2 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450553  4 + 189096842 TTT------T
i Callithrix_jacchus.pat_scaffold_3                      I 1 C 0
s Callithrix_kuhlii.k119_404482                              16846  4 -     18408 ttt------t
i Callithrix_kuhlii.k119_404482                          I 1 C 0
s CanFam4.chr16                                           42502253  3 +  60362399 -tt------t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5883  3 -     23171 -tt------t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219244  3 +   9314153 -tt------t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41612369  3 +  59632846 -tt------t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45103939  3 -  63665305 -tt------t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267617  4 +    496798 tct------t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               1683  3 +      5315 -tt------t
i Carollia_perspicillata.CarPer_scaffold_170178          I 3 C 0
s Cebuella_niveiventris.k141_592277                           2132  4 -     12580 ttt------t
i Cebuella_niveiventris.k141_592277                      I 1 C 0
s Cebuella_pygmaea.k141_145798                               40018  4 +     53515 ttt------t
i Cebuella_pygmaea.k141_145798                           I 1 C 0
s Cebus_albifrons.Contig27                                  368220  4 -  26074798 ttt------t
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5109  4 -     34880 ttt------t
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64204  4 -     89041 ttt------t
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            786  4 -      1636 TCT------T
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489225  3 -  27778364 -tt------t
i Ceratotherium_simum.JH767749.1                         I 6 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16058  3 +     27315 -tt------t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 6 C 0
s Cercocebus_atys.KQ010504.1                                137718  4 -   4669795 ttt------t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41458  3 +     47900 att-------
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41290  4 -     44860 ttt------t
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41272  5 -    148725 tttt-----t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24334  5 -     40656 tttt-----t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4269  5 +     20796 tttt-----t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8524  5 -     17524 tttt-----t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24213  5 -     34525 tttt-----t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8923  5 -     25376 tttt-----t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361489  5 -  39242232 tttt-----t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267233  5 +  21565898 tttt-----t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28687  7 -     45857 tttttt---t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24478  5 -     32606 tttt-----t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          665  5 +      8499 tttt-----t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22177 10 +     70610 tttttttttt
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19042  5 +     36323 tttt-----t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10269  4 -     19938 -ttt-----t
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             27666  3 -     33796 -tt------t
i Cheirogaleus_major.k141_666340                         I 3 C 0
s Cheirogaleus_medius.k141_759766                             1853  3 -     15404 -tt------t
i Cheirogaleus_medius.k141_759766                        I 3 C 0
s Cheracebus_lucifer.k141_2312002                             6106  4 -     32913 ttt------t
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16519  4 -     40346 ttt------t
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16783  4 +    216457 ttt------t
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16562  4 +     39636 ttt------t
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            978  4 +      5346 ttt------c
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39651  5 -    112038 tttt-----c
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5223  5 +     34062 tttt-----c
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339938  5 +  18827391 ttt-----gt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6549  5 -     44032 ttt-----gt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301264  5 - 135778131 ttt-----gt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405831  3 -   2368649 ttt-------
i Colobus_angolensis.KN981557.1                          C 0 I 1
s Colobus_guereza.LG01                                      374994  3 - 200372422 TTT-------
i Colobus_guereza.LG01                                   C 0 I 1
s Colobus_polykomos.k141_1559707                              5719  3 -      6605 TTT-------
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804412  3 +  53390261 -tt------t
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9860  3 +     10921 -tt------t
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               918  3 +     87169 -tt------a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2107610  4 -   2246927 -ttt-----G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289681  3 +  12879189 -gt------t
i Daubentonia_madagascariensis.ctg71                     I 3 C 0
s Desmodus_rotundus.KZ672289.1                            11861327  3 -  20541912 -tt------t
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661509  3 -   1390856 -tt------g
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 6 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136302  3 -    198055 -tt------t
i Diceros_bicornis.DicBicMic_scaffold_5955               I 6 C 0
s Eidolon_helvum.AWHC01266696.1                               2901  3 +     19438 -TT------T
i Eidolon_helvum.AWHC01266696.1                          I 3 C 0
s Elephantulus_edwardii.JH947257.1                         9098632  3 -  10337057 -TT------T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24912989  3 +  41312741 -tt------t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              3038470  3 -   4378816 -tt------t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21372404  3 +  39960074 -tt------t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409190  3 -    498745 -tt------t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               259496  5 +  21539334 ttt-----gt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243346  3 - 206538554 -tt------t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185113128  3 - 205367284 -tt------t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24476  3 -     30238 -tt------t
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     120496  4 -    137831 ttt------t
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4037  4 +     22493 ttt------t
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17512  4 +     32986 ttt------t
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16095  4 +     18121 ttt------t
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1621  4 -      8343 ttt------t
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251120  4 - 186649187 ttt------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27452  3 -    327341 -tt------a
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546771  3 -   1711038 -tt------t
i Hipposideros_armiger.JXIK01000431.1                    I 3 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               46090  3 +     49977 -TT------T
i Hipposideros_galeritus.HipGal_scaffold_23202           I 3 C 0
s Hoolock_leuconedys.ctg274                                    139014  4 -    630532 ttt------t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65910  3 +     83186 -TT------A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               2048  4 +     12352 ttt------t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9231  4 +     55766 ttt------t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048569  4 + 191637585 ttt------t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797901  4 +  11177569 ttt------t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     733  3 -      1527 -tt------t
i Indri_indri.k141_4600452                               I 3 C 0
s Lagothrix_lagothricha.k141_246028                          40367  4 +    110728 ttt------t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1059  4 -     13097 TTT------T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1010  4 +      5940 TTT------T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         641  4 -      5717 ttt------t
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7269  4 -     11567 ttt------t
i Leontopithecus_chrysomelas.k141_1327670                I 1 C 0
s Leontopithecus_rosalia.k141_349454                          8650  4 -     12945 ttt------t
i Leontopithecus_rosalia.k141_349454                     I 1 C 0
s Lepilemur_ankaranensis.k141_567626                          6026  3 +     29618 -tt------t
i Lepilemur_ankaranensis.k141_567626                     I 3 C 0
s Lepilemur_dorsalis.k141_387009                              6023  3 +     31569 -tt------t
i Lepilemur_dorsalis.k141_387009                         I 3 C 0
s Lepilemur_ruficaudatus.k141_330196                          6035  3 +     24756 -tt------t
i Lepilemur_ruficaudatus.k141_330196                     I 3 C 0
s Lepilemur_septentrionalis.k141_360456                       6027  3 +     16388 -tt------t
i Lepilemur_septentrionalis.k141_360456                  I 3 C 0
s Leptonychotes_weddellii.KB714746.1                        810343  3 -   3914936 -tg------t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               329674  5 -   1826925 tttt-----t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2993  4 +     19643 TCT------T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036652  4 -   6120653 TCT------T
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611524  3 +  59628241 -tt------t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              41955  5 -     61512 tttt-----t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369583  5 -  60120075 tttt-----t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21903  5 +     30207 tttt-----t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19006  5 -     24934 tttt-----t
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21789  5 +     30527 tttt-----t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32979  5 -     50087 tttt-----t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42717  5 +     51645 tttt-----t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411291  5 - 187317192 tttt-----t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396174  5 +  25927173 tttt-----t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45305  5 -     62418 tttt-----t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21993  5 +     24253 tttt-----t
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41750  5 +     59329 tttt-----t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267582  5 +    668171 tttt-----t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18928  5 +     21031 tttt-----t
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32661  5 +     33478 tttt-----t
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219851  3 -    270270 -TT------G
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 3 C 0
s Mandrillus_leucophaeus.scaffold280                        319056  6 +  24302211 ttttt----t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353888  6 -    752769 ttttt----t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670555  3 -    737560 -tt------c
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217850  3 +    317179 -tt------t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       147031  3 +    207569 -tt------t
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             22858  3 -     74585 -tt------t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mico_argentatus.k141_582562                                 7020  4 +     17804 ttt------t
i Mico_argentatus.k141_582562                            I 1 C 0
s Mico_humeralifer.k141_1180625                               7793  4 -     12984 ttt------t
i Mico_humeralifer.k141_1180625                          I 1 C 0
s Mico_schneideri.k141_1877700                                     15755  4 -     26561 ttt------t
i Mico_schneideri.k141_1877700                                 I 1 C 0
s Microcebus_murinus.CM007674.1                           74981635  3 +  93316391 -TT------G
i Microcebus_murinus.CM007674.1                          I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181261  3 +    200668 -TT------T
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 3 C 0
s Miniopterus_natalensis.LDJU01000308.1                     494477  3 -   1897963 -ta------t
i Miniopterus_natalensis.LDJU01000308.1                  I 20 C 0
s Miniopterus_schreibersii.MinSch_scaffold_3531             133912  3 +    183988 -ta------t
i Miniopterus_schreibersii.MinSch_scaffold_3531          I 20 C 0
s Miopithecus_ogouensis.k141_1534655                         19049  5 -     27822 tttt-----t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5352  3 +     27589 -tg------t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     49493  3 -     62432 -tt------t
i Mirza_zaza.k141_766280                                 I 3 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175446  3 +    366855 -TT------T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15206  3 -     63510 -tt------a
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mustela_putorius.JH418006.1                             14351797  3 +  14710649 -tt------t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117040  3 +    130748 -tt------t
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              25365  5 +     34575 tttt-----t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465737  3 -  31847680 -tg------t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   124112  3 -    149072 -TT------T
i Noctilio_leporinus.NocLep_scaffold_7894                I 7 C 0
s Nomascus_annamensis.k141_1771965                           50310  4 -    132029 ttt------t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6406  4 -     16345 ttt------t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12290  4 +     22201 ttt------t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410626  4 -  22158432 ttt------t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22689  4 -     54323 ttt------t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195139  3 +   9404916 -tt------t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93631768  4 + 196305487 TCT------T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1157  4 +      2758 TCT------T
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560022  4 - 199412804 TCT------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448521  3 +   2017862 -tg------t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931               5278  3 -     14239 -TT------T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36187  3 +    559221 -tt------t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        35627  4 -     51505 ttt------t
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             348642  4 +   1103335 ttt------t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468510  4 - 189151597 ttt------t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21066  3 -    230217 -tt------t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18458392  3 -  18783137 -tt------t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3969117  3 +   8748460 -tt------t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   239902  5 - 183742232 tttt-----t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6368  5 +     21308 tttt-----t
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287405  5 -  20919399 tttt-----t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19021  5 -     27687 tttt-----t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12157  5 +     16796 tttt-----t
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18967  5 -     23640 tttt-----t
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11981  3 +     78924 -ta------t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21876  4 +     31479 TTT------T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14246  4 -     24908 TTT------T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5823  3 +      7560 ttt-------
i Piliocolobus_badius.k141_2495623                       C 0 I 1
s Piliocolobus_gordonorum.k141_905727                        61530  3 -     63152 TTT-------
i Piliocolobus_gordonorum.k141_905727                    C 0 I 1
s Piliocolobus_kirkii.k141_579682                            44129  3 +     45295 ttt-------
i Piliocolobus_kirkii.k141_579682                        C 0 I 1
s Piliocolobus_tephrosceles.PDMG02034973.1                    1808  3 +      5735 ttt-------
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 I 1
s Pithecia_albicans.k141_1239476                             62002  4 +    207309 ttt------c
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3122  4 -     25401 ttt------c
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28837  4 +     58159 ttt------c
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29113  4 +     63561 ttt------c
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28876  4 +     51148 ttt------c
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553869  4 -   4542175 ttt------c
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28860  4 +     51125 ttt------c
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5280  4 +     39866 ttt------t
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           367  4 -      9282 ttt------t
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39768  4 -     87950 ttt------t
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40161  4 -     88961 ttt------t
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4860  4 -     39403 ttt------t
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39814  4 +     87928 ttt------t
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4858  4 -     60166 ttt------t
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11794  4 -     67232 ttt------t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39710  4 -     90634 ttt------t
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41178  4 +     89403 ttt------t
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174127  4 - 189387572 ttt------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189125  4 -   9816681 ttt------t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24306  5 +     69807 TTT-----TT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41501  5 -     80239 tttt-----t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563115  3 -   2598838 -TT------T
i Propithecus_coquerelli.NW_012148875.1                  I 3 C 0
s Propithecus_coronatus.k141_209299                            753  3 -      7103 -tt------t
i Propithecus_coronatus.k141_209299                      I 3 C 0
s Propithecus_diadema.k141_153680                             1350  3 -     11706 -tt------t
i Propithecus_diadema.k141_153680                        I 3 C 0
s Propithecus_edwardsi.k141_635656                            5085  3 -     30655 -tt------t
i Propithecus_edwardsi.k141_635656                       I 3 C 0
s Propithecus_perrieri.k141_1496898                          31410  3 +     46564 -tt------t
i Propithecus_perrieri.k141_1496898                      I 3 C 0
s Propithecus_tattersalli.k141_1127767                       91681  3 -     98465 -tt------t
i Propithecus_tattersalli.k141_1127767                   I 3 C 0
s Propithecus_verreauxi.k141_1047036                          5320  3 +     35169 -tt------t
i Propithecus_verreauxi.k141_1047036                     I 3 C 0
s Pteronotus_parnellii.KE847780.1                            48507  3 -     66298 -tt------t
i Pteronotus_parnellii.KE847780.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1581  3 -     18639 -tt------t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5837484  3 -  28871421 -tt------t
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Pteropus_vampyrus.KN525825.1                             3534045  3 -   4952924 -tt------t
i Pteropus_vampyrus.KN525825.1                           I 3 C 0
s Puma_concolor.QAVW01001104.1                            18095943  3 +  38429054 -tt------t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23697  5 +     91421 TTT-----TT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150190  5 -   7812017 TTT-----TT
i Pygathrix_nigripes_b.ctg100                               I 1 C 0
s Pygathrix_nigripes_a.k141_215492                              4567  5 +     72585 tttt-----t
i Pygathrix_nigripes_a.k141_215492                         I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2910131  3 +   3329780 -tt------t
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 C 0
s Rhinopithecus_bieti.k119_221883                            25527  5 +     27361 tttt-----t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118877  3 + 195417433 ttt-------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233135  5 -   7961872 tttt-----t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71507  3 -    116970 -tt------t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 3 C 0
s Saguinus_bicolor.k141_1429097                                977  4 +     27962 ttc------t
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              990  4 +      6077 ttt------t
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1003  4 +      5971 ttt------t
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1058  4 +      5932 TTT------T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1204  4 -      2099 TTT------T
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388236  4 - 209938924 ttt------t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1005  4 +      5979 TTT------T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1389  4 -      4301 ttt------t
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235443  4 +   5703754 ttt------t
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5033  4 +     21866 ttt------t
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113172  3 +    313613 -tt------t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 6 C 0
s Semnopithecus_entellus.k141_158471                         22011  4 +     27374 -ttt-----t
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25531  4 +     58920 -ttt-----t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12026  4 -     45317 -ttt-----t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19683  4 -     42441 -TT-----TT
i Semnopithecus_priam.k141_714795                        C 0 I 1
s Semnopithecus_schistaceus.k141_1432920                     22365  4 -     29113 -ttt-----t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25434  4 -     48123 -TT-----TT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855862  3 -   1910179 -tt------a
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3582  3 -     97271 -tt------t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121613  3 +    196729 -tt------a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387597  4 +   1523678 ttt------t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_231636                 556  3 +      3470 -ta------c
i Tadarida_brasiliensis.TadBra_scaffold_231636           I 20 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1911  3 -      2009 -tt------t
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188242  3 +    199430 -tt------t
i Tapirus_indicus.TapInd_scaffold_7432                   I 5 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102193  3 -    539355 -tt------t
i Tapirus_terrestris.TapTer_scaffold_755                 I 5 C 0
s Tarsius_lariang.k141_1780720                                4309  4 +      6850 TCT------T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4348  4 +     20590 TCT------T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349886  5 - 186847797 tttt-----t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17271  4 -     31044 -ttt-----t
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476321  3 -    610378 -TT------T
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_1189070                        17578  4 +     26378 -TT-----TT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30259  4 -     78344 -TT-----TT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16899  4 +     25722 -ttt-----t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25125  4 -     62838 -TT-----TT
i Trachypithecus_francoisi.k141_1453105                  I 3 C 0
s Trachypithecus_geei.k141_1001272                           25242  4 +     46913 -ttt-----t
i Trachypithecus_geei.k141_1001272                       I 3 C 0
s Trachypithecus_germaini.k141_57262                          6049  4 -     28527 -ttt-----t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27064  4 -     64340 -TT-----TT
i Trachypithecus_hatinhensis.k141_31479                  I 3 C 0
s Trachypithecus_laotum.k141_928651                          25101  4 -     63452 -TT-----TT
i Trachypithecus_laotum.k141_928651                      I 3 C 0
s Trachypithecus_leucocephalus.k141_96450                     6543  4 +     22490 -ttt-----t
i Trachypithecus_leucocephalus.k141_96450                I 3 C 0
s Trachypithecus_obscurus.k141_848057                         6966  4 -     13050 -ttt-----t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252201  4 -   6242583 -TT-----TT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57936  4 +     59866 -ttt-----t
i Trachypithecus_pileatus.k141_2862967                   I 3 C 0
s Tupaia_chinensis.KB320699.1                              1830178  4 -   4065304 ctt------t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4730  4 -     70247 CTT------T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104401  3 -    105689 -TT------T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178474  3 +   5085361 -tt------t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22166  3 -     30710 -ct------t
i Varecia_rubra.k141_787544                              I 3 C 0
s Varecia_variegata.k141_289850                              21073  3 -    147434 -ct------t
i Varecia_variegata.k141_289850                          I 3 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101905  3 -    112863 -tt------t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25741  3 -     86975 -tg------t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               378852 458 +   4330536 I
e Myotis_davidii.KB100139.1                                4383241 234 +   6019432 I
e Myotis_brandtii.KE162005.1                               9788622 460 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          34604 32 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12574705 34 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1271  3 +     36723 TT--------------------T
s Allenopithecus_nigroviridis.k141_3755588                   44560  2 +     53615 tt---------------------
i Allenopithecus_nigroviridis.k141_3755588               C 0 I 1
s Allochrocebus_lhoesti.k141_441277                          40380  3 +     44087 tt--------------------t
i Allochrocebus_lhoesti.k141_441277                      C 0 I 2
s Allochrocebus_preussi.k141_1993939                         13084  3 -     21945 tt--------------------t
i Allochrocebus_preussi.k141_1993939                     C 0 I 2
s Allochrocebus_solatus.k141_3554717                         14762  3 +     32033 tt--------------------c
i Allochrocebus_solatus.k141_3554717                     C 0 I 2
s Arctocebus_calabarensis.k141_1364444                       16436  3 -     45910 TT--------------------T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Avahi_laniger.k141_2756659                                  3243  3 +     11645 tt--------------------t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3244  3 -     19611 tt--------------------t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267621  1 +    496798 t----------------------
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cephalopachus_bancanus.k141_72622                            790  1 -      1636 T----------------------
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137722  2 -   4669795 tt---------------------
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41461  3 +     47900 tt--------------------t
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41294  3 -     44860 tt--------------------t
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41277  3 -    148725 tt--------------------t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24339  3 -     40656 tt--------------------t
i Cercopithecus_ascanius.k141_3120866                    C 0 I 1
s Cercopithecus_cephus.k141_4183004                           4274  3 +     20796 tt--------------------t
i Cercopithecus_cephus.k141_4183004                      C 0 I 2
s Cercopithecus_diana.k141_132293                             8529  3 -     17524 tt--------------------t
i Cercopithecus_diana.k141_132293                        C 0 I 3
s Cercopithecus_hamlyni.k141_566925                          24218  3 -     34525 tt--------------------t
i Cercopithecus_hamlyni.k141_566925                      C 0 I 2
s Cercopithecus_lowei.k141_2101310                            8928  3 -     25376 tt--------------------t
i Cercopithecus_lowei.k141_2101310                       C 0 I 2
s Cercopithecus_albogularis.ctg5                                  361494  3 -  39242232 tt--------------------t
i Cercopithecus_albogularis.ctg5                               C 0 I 2
s Cercopithecus_mona.ctg39                                  267238  3 +  21565898 tt--------------------t
i Cercopithecus_mona.ctg39                               C 0 I 2
s Cercopithecus_neglectus.k141_858615                        28694  3 -     45857 tt--------------------t
i Cercopithecus_neglectus.k141_858615                    C 0 I 2
s Cercopithecus_nictitans.k141_2995370                       24483  3 -     32606 tt--------------------t
i Cercopithecus_nictitans.k141_2995370                   C 0 I 2
s Cercopithecus_petaurista.k141_42573                          670  2 +      8499 -t--------------------t
i Cercopithecus_petaurista.k141_42573                    C 0 I 2
s Cercopithecus_pogonias.k141_6079                           22187  3 +     70610 tt--------------------t
i Cercopithecus_pogonias.k141_6079                       C 0 I 2
s Cercopithecus_roloway.k141_3012935                         19047  3 +     36323 tt--------------------t
i Cercopithecus_roloway.k141_3012935                     C 0 I 2
s Cheirogaleus_major.k141_666340                             27669  3 -     33796 tt--------------------t
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1856  3 -     15404 tt--------------------t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Chlorocebus_aethiops.ctg25                                339943  3 +  18827391 tt--------------------t
i Chlorocebus_aethiops.ctg25                             C 0 I 2
s Chlorocebus_pygerythrus.k141_3063162                        6554  3 -     44032 tt--------------------t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 I 2
s Chlorocebus_sabaeus.CM001947.1                            301269  3 - 135778131 tt--------------------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 2
s Colobus_angolensis.KN981557.1                             405835  3 -   2368649 tt--------------------t
i Colobus_angolensis.KN981557.1                          I 1 I 2
s Colobus_guereza.LG01                                      374998  3 - 200372422 TT--------------------T
i Colobus_guereza.LG01                                   I 1 I 2
s Colobus_polykomos.k141_1559707                              5722  3 -      6605 TT--------------------T
i Colobus_polykomos.k141_1559707                         C 0 I 2
s Daubentonia_madagascariensis.ctg71                        289684  3 +  12879189 tt--------------------t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                               259501  3 +  21539334 tt--------------------t
i Erythrocebus_patas.Contig38                            C 0 I 2
s Galago_moholi.ctg3793                                     120500  3 -    137831 tt--------------------t
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4041  3 +     22493 tt--------------------t
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17516  3 +     32986 tt--------------------t
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Gorilla_beringei.k141_3358147                               1625  3 -      8343 tt--------------------t
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251124  3 - 186649187 tt--------------------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    139018  3 -    630532 tt--------------------t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               2052  3 +     12352 tt--------------------t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9235  3 +     55766 tt--------------------t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048573  3 + 191637585 tt--------------------t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797905  3 +  11177569 tt--------------------t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     736  3 -      1527 tt--------------------t
i Indri_indri.k141_4600452                               C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6029  3 +     29618 tt--------------------t
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6026  3 +     31569 tt--------------------t
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6038  3 +     24756 tt--------------------t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6030  3 +     16388 tt--------------------t
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               329679  1 -   1826925 t----------------------
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            2997  3 +     19643 TT--------------------T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036656  3 -   6120653 TT--------------------T
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_1757516                              41960  2 -     61512 tt---------------------
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369588  2 -  60120075 tt---------------------
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21908  2 +     30207 tt---------------------
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19011  2 -     24934 tt---------------------
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21794  2 +     30527 tt---------------------
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32984  2 -     50087 tt---------------------
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42722  2 +     51645 tt---------------------
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411296  2 - 187317192 tt---------------------
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396179  2 +  25927173 tt---------------------
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45310  2 -     62418 tt---------------------
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                21998  2 +     24253 tt---------------------
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41755  2 +     59329 tt---------------------
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267587  2 +    668171 tt---------------------
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18933  2 +     21031 tt---------------------
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32666  2 +     33478 tt---------------------
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319062  3 +  24302211 tt--------------------t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353894  3 -    752769 tt--------------------t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Microcebus_murinus.CM007674.1                           74981638  3 +  93316391 TT--------------------T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19054  3 -     27822 tt--------------------t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     49496  3 -     62432 tt--------------------t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              25370  3 +     34575 tt--------------------t
i Nasalis_larvatus.k141_1350636                          C 0 I 1
s Nomascus_annamensis.k141_1771965                           50314  3 -    132029 tt--------------------t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6410  3 -     16345 tt--------------------t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12294  3 +     22201 tt--------------------t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410630  3 -  22158432 tt--------------------t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22693  3 -     54323 tt--------------------t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93631772  3 + 196305487 TT--------------------T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1161  3 +      2758 TT--------------------T
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560026  3 - 199412804 TT--------------------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        35631  3 -     51505 tt--------------------t
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             348646  3 +   1103335 tt--------------------t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468514  3 - 189151597 tt--------------------t
i Pan_troglodytes.CM009242.2                             C 0 I 10
s Papio_anubis.CM001495.2                                   239907  1 - 183742232 t----------------------
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6373  1 +     21308 t----------------------
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287410  1 -  20919399 t----------------------
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19026  1 -     27687 t----------------------
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12162  1 +     16796 t----------------------
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18972  1 -     23640 t----------------------
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21880  3 +     31479 TT--------------------T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14250  3 -     24908 TT--------------------T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5827  3 +      7560 tt--------------------t
i Piliocolobus_badius.k141_2495623                       I 1 I 1
s Piliocolobus_gordonorum.k141_905727                        61534  3 -     63152 TT--------------------T
i Piliocolobus_gordonorum.k141_905727                    I 1 I 1
s Piliocolobus_kirkii.k141_579682                            44133  3 +     45295 tt--------------------t
i Piliocolobus_kirkii.k141_579682                        I 1 I 1
s Piliocolobus_tephrosceles.PDMG02034973.1                    1812  3 +      5735 tt--------------------t
i Piliocolobus_tephrosceles.PDMG02034973.1               I 1 I 1
s Pongo_abelii.CM009266.2                                   174131  3 - 189387572 tt--------------------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189129  3 -   9816681 tt--------------------t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24311  3 +     69807 TT--------------------T
i Presbytis_comata.k141_1230337                          C 0 I 1
s Presbytis_mitrata.k141_584736                              41506  3 -     80239 tt--------------------t
i Presbytis_mitrata.k141_584736                          C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                    1563118  3 -   2598838 TT--------------------T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            756  3 -      7103 tt--------------------t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1353  3 -     11706 tt--------------------t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5088  3 -     30655 tt--------------------t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31413  3 +     46564 tt--------------------t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91684  3 -     98465 tt--------------------t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5323  3 +     35169 tt--------------------t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23702  3 +     91421 TT--------------------T
i Pygathrix_cinerea.k141_1153803                         C 0 I 1
s Pygathrix_nigripes_b.ctg100                                  150195  3 -   7812017 TT--------------------T
i Pygathrix_nigripes_b.ctg100                               C 0 I 1
s Pygathrix_nigripes_a.k141_215492                              4572  3 +     72585 tt--------------------t
i Pygathrix_nigripes_a.k141_215492                         C 0 I 1
s Rhinopithecus_bieti.k119_221883                            25532  3 +     27361 tt--------------------t
i Rhinopithecus_bieti.k119_221883                        C 0 I 1
s Rhinopithecus_roxellana.NC_044550.1                    104118880  3 + 195417433 tt--------------------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 1
s Rhinopithecus_strykeri.ctg102                             233140  3 -   7961872 tt--------------------t
i Rhinopithecus_strykeri.ctg102                          C 0 I 1
s Semnopithecus_entellus.k141_158471                         22015  3 +     27374 tt--------------------t
i Semnopithecus_entellus.k141_158471                     C 0 I 5
s Semnopithecus_hypoleucos.k141_1910531                      25535  2 +     58920 -t--------------------t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 I 5
s Semnopithecus_johnii.k141_843753                           12030  3 -     45317 tt--------------------t
i Semnopithecus_johnii.k141_843753                       C 0 I 5
s Semnopithecus_priam.k141_714795                            19688  3 -     42441 TT--------------------T
i Semnopithecus_priam.k141_714795                        I 1 I 5
s Semnopithecus_schistaceus.k141_1432920                     22369  2 -     29113 -t--------------------t
i Semnopithecus_schistaceus.k141_1432920                 C 0 I 5
s Semnopithecus_vetulus.k141_244474                          25438  2 -     48123 -T--------------------T
i Semnopithecus_vetulus.k141_244474                      C 0 I 5
s Symphalangus_syndactylus.tarseq_199                       387601  3 +   1523678 tt--------------------t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                4313  1 +      6850 T----------------------
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4352  1 +     20590 T----------------------
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           349891  3 - 186847797 tt--------------------t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        17582  3 +     26378 TT--------------------T
i Trachypithecus_auratus.k141_1189070                    C 0 I 4
s Trachypithecus_crepusculus.k141_539312                     30263  3 -     78344 TT--------------------T
i Trachypithecus_crepusculus.k141_539312                 C 0 I 1
s Trachypithecus_cristatus.k141_180416                       16903  3 +     25722 tt--------------------t
i Trachypithecus_cristatus.k141_180416                   C 0 I 4
s Trachypithecus_francoisi.k141_1453105                      25129  3 -     62838 TT--------------------T
i Trachypithecus_francoisi.k141_1453105                  C 0 I 1
s Trachypithecus_geei.k141_1001272                           25246  3 +     46913 tt--------------------t
i Trachypithecus_geei.k141_1001272                       C 0 I 1
s Trachypithecus_germaini.k141_57262                          6053  1 -     28527 ----------------------t
i Trachypithecus_germaini.k141_57262                     C 0 I 4
s Trachypithecus_hatinhensis.k141_31479                      27068  3 -     64340 TT--------------------T
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 1
s Trachypithecus_laotum.k141_928651                          25105  3 -     63452 TT--------------------T
i Trachypithecus_laotum.k141_928651                      C 0 I 1
s Trachypithecus_leucocephalus.k141_96450                     6547  3 +     22490 tt--------------------t
i Trachypithecus_leucocephalus.k141_96450                C 0 I 2
s Trachypithecus_obscurus.k141_848057                         6970  3 -     13050 tt--------------------t
i Trachypithecus_obscurus.k141_848057                    C 0 I 1
s Trachypithecus_phayrei.ctg124                             252205  3 -   6242583 TT--------------------T
i Trachypithecus_phayrei.ctg124                          C 0 I 1
s Trachypithecus_pileatus.k141_2862967                       57940  3 +     59866 tt--------------------t
i Trachypithecus_pileatus.k141_2862967                   C 0 I 1
s Varecia_rubra.k141_787544                                  22169 23 -     30710 ttcaatactgctcccttttaggt
i Varecia_rubra.k141_787544                              C 0 I 1
s Varecia_variegata.k141_289850                              21076 23 -    147434 ttcaatactgctcccttttaggt
i Varecia_variegata.k141_289850                          C 0 I 1
e Orycteropus_afer.OryAfe_flattened_line_171931               5281  0 -     14239 C
e Elephantulus_edwardii.JH947257.1                         9098635  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11861330  0 -  20541912 C
e Callibella_humilis.k141_1233062                             7241  0 +     18648 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17275  0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2107614  0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10273  0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               1686  0 +      5315 C
e Tupaia_tana.TupTan_flattened_line_394                       4734  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1830182  0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         25744  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                101908  0 -    112863 C
e Ursus_maritimus.KK499267.1                                178477  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              3585  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          1584  0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        36190  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1448524  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195142  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11465740  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14351800  0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5355  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             22861  0 -     74585 C
e Lycaon_pictus.CM007581.1                                41611527  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810346  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24912992  0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45103942  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41612372  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          219247  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     5886  0 -     23171 C
e CanFam4.chr16                                           42502256  0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  1600  0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20411953  0 +  29979442 C
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104404  0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    476324  0 -    610378 C
e Tapirus_terrestris.TapTer_scaffold_755                    102196  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      188245  0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_445853                1914  0 -      2009 C
e Tadarida_brasiliensis.TadBra_scaffold_231636                 559  0 +      3470 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             121616  0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1855865  0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113175  0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           5037  0 +     21866 C
e Sapajus_apella.ctg103                                     235447  0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1393  0 -      4301 C
e Saguinus_mystax.k141_8077960                                1009  0 +      5979 C
e Saguinus_midas.LG03                                       388240  0 - 209938924 C
e Saguinus_labiatus.k141_1571581                              1208  0 -      2099 C
e Saguinus_inustus.k141_2469308                               1062  0 +      5932 C
e Saguinus_imperator.k141_1898058                             1007  0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                              994  0 +      6077 C
e Saguinus_bicolor.k141_1429097                                981  0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71510  0 -    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                       2910134  0 +   3329780 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18095946  0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3534048  0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5837487  0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            48510  0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Plecturocebus_moloch.k141_1031110                          41182  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          39714  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      11798  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          4862  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          39818  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          4864  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     40165  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       39772  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                           371  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        5284  0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           28864  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              553873  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           28880  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         29117  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               28841  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          3126  0 -     25401 C
e Pithecia_albicans.k141_1239476                             62006  0 +    207309 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11984  0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969120  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18458395  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21069  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   124115  0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117043  0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               378852 458 +   4330536 I
e Myotis_davidii.KB100139.1                                4383241 234 +   6019432 I
e Myotis_brandtii.KE162005.1                               9788622 460 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          34604 32 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   15209  0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 175449  0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             133915  0 +    183988 C
e Miniopterus_natalensis.LDJU01000308.1                     494480  0 -   1897963 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                181264  0 +    200668 C
e Mico_schneideri.k141_1877700                                     15759  0 -     26561 C
e Mico_humeralifer.k141_1180625                               7797  0 -     12984 C
e Mico_argentatus.k141_582562                                 7024  0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       147034  0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Manis_pentadactyla.KN006162.1                             217853  0 +    317179 C
e Manis_javanica.JSZB01003497.1                             670558  0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                219854  0 -    270270 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Leontopithecus_rosalia.k141_349454                          8654  0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     7273  0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                         645  0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           1014  0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        1063  0 -     13097 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Lagothrix_lagothricha.k141_246028                          40371  0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  65913  0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_23202               46093  0 +     49977 C
e Hipposideros_armiger.JXIK01000431.1                      1546774  0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                27455  0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16099  0 +     18121 C
e Felis_nigripes.FelNig_flattened_line_31944                 24479  0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113131  0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Equus_przewalskii.KK951119.1                              409193  0 -    498745 C
e Equus_caballus.CM000403.2                               21372407  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3038473  0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12574705 34 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               2904  0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  136305  0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  661512  0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129               921  0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_101005          9863  0 +     10921 C
e Condylura_cristata.JH655891.1                           35804415  0 +  53390261 C
e Chiropotes_sagulatus.k141_1113111                           5228  0 +     34062 C
e Chiropotes_israelita.k141_313004                           39656  0 -    112038 C
e Chiropotes_albinasus.k141_1946120                            982  0 +      5346 C
e Cheracebus_torquatus.k141_890198                           16566  0 +     39636 C
e Cheracebus_regulus.k141_471822                             16787  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             16523  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             6110  0 -     32913 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16061  0 +     27315 C
e Cebus_unicolor.k141_1654760                                64208  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                5113  0 -     34880 C
e Cebus_albifrons.Contig27                                  368224  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               40022  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           2136  0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              16850  0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165450557  0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           15602  0 +     17162 C
e Callimico_goeldii.k141_1609886                              6925  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         17749  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  17836  0 +     95584 C
e Cacajao_calvus.k141_89051                                  40310  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   5016  0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Ateles_paniscus.k141_866194                                20112  0 -     33135 C
e Ateles_marginatus.k141_970259                              46053  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              30681  0 +     44353 C
e Ateles_chamek.k141_615173                                   3128  0 -     28759 C
e Ateles_belzebuth.k141_1572163                               7992  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               271824  0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Aotus_vociferans.k141_944972                                6374  0 +      8415 C
e Aotus_trivirgatus.k141_192090                              21238  0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                669596  0 +   5030052 C
e Aotus_griseimembra.k141_982342                             41583  0 +     43593 C
e Aotus_azarae.k141_118258                                   47838  0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      173294  0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30026  0 +     42133 C
e Alouatta_puruensis.k141_251022                              5887  0 +     30854 C
e Alouatta_palliata.k141_638677                              43763  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             38064  0 +     45454 C
e Alouatta_macconnelli.k141_361275                           21081  0 -     24835 C
e Alouatta_juara.k141_1687208                                39435  0 -     64179 C
e Alouatta_discolor.k141_2561099                             40997  0 +     55831 C
e Alouatta_caraya.k141_1109140                               41549  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             69323  0 -     84148 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           809684  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       1274 11 +     36723 T----C-TTTCCAT-----AC
s Acinonyx_jubatus.LLWD01001279.1                           809684  6 +   1699592 ----------caat-----ac
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 8
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411953  6 +  29979442 ----------cagt-----ac
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   44563 11 +     53615 c----c-tttccat-----ac
i Allenopithecus_nigroviridis.k141_3755588               I 1 C 0
s Allochrocebus_lhoesti.k141_441277                          40385 11 +     44087 t----c-tttccat-----ac
i Allochrocebus_lhoesti.k141_441277                      I 2 C 0
s Allochrocebus_preussi.k141_1993939                         13089 11 -     21945 t----c-tttccat-----ac
i Allochrocebus_preussi.k141_1993939                     I 2 C 0
s Allochrocebus_solatus.k141_3554717                         14767 11 +     32033 t----c-tttccat-----ac
i Allochrocebus_solatus.k141_3554717                     I 2 C 0
s Alouatta_belzebul.k141_1011583                             69323 11 -     84148 t----c-tttcagt-----gc
i Alouatta_belzebul.k141_1011583                         C 0 I 9
s Alouatta_caraya.k141_1109140                               41549 11 -     78289 t----c-tttcagt-----gc
i Alouatta_caraya.k141_1109140                           C 0 I 9
s Alouatta_discolor.k141_2561099                             40997 11 +     55831 t----c-tttcagt-----gc
i Alouatta_discolor.k141_2561099                         C 0 I 9
s Alouatta_juara.k141_1687208                                39435 11 -     64179 t----c-tttcagt-----gc
i Alouatta_juara.k141_1687208                            C 0 I 9
s Alouatta_macconnelli.k141_361275                           21081 11 -     24835 t----c-tttcagt-----gc
i Alouatta_macconnelli.k141_361275                       C 0 I 9
s Alouatta_nigerrima.k141_376068                             38064 11 +     45454 t----c-tttcagt-----gc
i Alouatta_nigerrima.k141_376068                         C 0 I 9
s Alouatta_palliata.k141_638677                              43763 11 +     70886 t----c-tttcagt-----gc
i Alouatta_palliata.k141_638677                          C 0 I 9
s Alouatta_puruensis.k141_251022                              5887 11 +     30854 t----c-tttcagt-----gc
i Alouatta_puruensis.k141_251022                         C 0 I 9
s Alouatta_seniculus.k141_928287                             30026 11 +     42133 t----c-tttcagt-----gc
i Alouatta_seniculus.k141_928287                         C 0 I 9
s Anoura_caudifer.AnoCau_scaffold_1412                      173294  6 -    412891 ----------caat-----ac
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Aotus_azarae.k141_118258                                   47838 11 -     65372 t----c-tttcagt-----ac
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41583 11 +     43593 t----c-tttcagt-----ac
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669596 11 +   5030052 t----c-tttcagt-----ac
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21238 11 -     23494 t----c-tttcagt-----ac
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6374 11 +      8415 t----c-tttcagt-----ac
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16439 11 -     45910 T----C-TGTCAAT-----AC
i Arctocebus_calabarensis.k141_1364444                   C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  1600  6 -     15198 ----------CAAT-----AC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 3
s Ateles_geoffroyi_b.tarseq_1536                               271824 11 +  21539123 t----c-tttcagt-----gc
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               7992 11 +     48076 t----c-tttcagt-----gc
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3128 11 -     28759 t----c-tttcagt-----gc
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30681 11 +     44353 t----c-tttcagt-----gc
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46053 11 -     71267 t----c-tttcagt-----gc
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20112 11 -     33135 t----c-tttcagt-----gc
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3246 10 +     11645 c----t--gtcaat-----ac
i Avahi_laniger.k141_2756659                             C 0 I 2
s Avahi_peyrierasi.k141_1823318                               3247 10 -     19611 c----t--gtcaat-----ac
i Avahi_peyrierasi.k141_1823318                          C 0 I 2
s Cacajao_ayresi.k141_96119                                   5016 11 +     28062 t----c-tttcggt-----ac
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40310 11 -     91139 t----c-tttcggt-----ac
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17836 11 +     95584 t----c-tttcggt-----ac
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17749 11 +    119600 t----c-ttttggt-----ac
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7241 11 +     18648 t----c-tttcagt-----tc
i Callibella_humilis.k141_1233062                        C 0 I 5
s Callimico_goeldii.k141_1609886                              6925 11 -     13885 t----c-tttcagt-----tc
i Callimico_goeldii.k141_1609886                         C 0 I 5
s Callithrix_geoffroyi.k119_473390                           15602 11 +     17162 t----c-tttcagt-----tc
i Callithrix_geoffroyi.k119_473390                       C 0 I 5
s Callithrix_jacchus.pat_scaffold_3                      165450557 11 + 189096842 T----C-TTTCAGT-----TC
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 5
s Callithrix_kuhlii.k119_404482                              16850 11 -     18408 t----c-tttcagt-----tc
i Callithrix_kuhlii.k119_404482                          C 0 I 5
s CanFam4.chr16                                           42502256  6 +  60362399 ----------caat-----ac
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5886  6 -     23171 ----------caat-----ac
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                          219247  6 +   9314153 ----------caat-----ac
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            41612372  6 +  59632846 ----------caat-----ac
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            45103942  6 -  63665305 ----------caat-----ac
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_170178               1686  6 +      5315 ----------caat-----ac
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 3
s Cebuella_niveiventris.k141_592277                           2136 11 -     12580 t----c-tttcagt-----tc
i Cebuella_niveiventris.k141_592277                      C 0 I 5
s Cebuella_pygmaea.k141_145798                               40022 11 +     53515 t----c-tttcagt-----tc
i Cebuella_pygmaea.k141_145798                           C 0 I 5
s Cebus_albifrons.Contig27                                  368224 11 -  26074798 t----c-tttcagt-----gc
i Cebus_albifrons.Contig27                               C 0 I 8
s Cebus_olivaceus.k141_1404781                                5113 11 -     34880 t----c-tttcagt-----gc
i Cebus_olivaceus.k141_1404781                           C 0 I 8
s Cebus_unicolor.k141_1654760                                64208 11 -     89041 t----c-tttcagt-----gc
i Cebus_unicolor.k141_1654760                            C 0 I 8
s Ceratotherium_simum.JH767749.1                          15489228  6 -  27778364 ----------caat-----ac
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16061  6 +     27315 ----------caat-----ac
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 1
s Cercocebus_atys.KQ010504.1                                137724 11 -   4669795 t----c-tttccat-----ac
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41464 11 +     47900 t----c-tttccat-----ac
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41297 11 -     44860 t----c-tttccat-----ac
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41280 11 -    148725 t----c-tttccat-----ac
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24343 11 -     40656 t----c-tttccat-----ac
i Cercopithecus_ascanius.k141_3120866                    I 1 C 0
s Cercopithecus_cephus.k141_4183004                           4279 11 +     20796 t----c-tttccat-----ac
i Cercopithecus_cephus.k141_4183004                      I 2 C 0
s Cercopithecus_diana.k141_132293                             8535 11 -     17524 t----c-tttccat-----ac
i Cercopithecus_diana.k141_132293                        I 3 C 0
s Cercopithecus_hamlyni.k141_566925                          24223 11 -     34525 t----c-tttccat-----ac
i Cercopithecus_hamlyni.k141_566925                      I 2 C 0
s Cercopithecus_lowei.k141_2101310                            8933 11 -     25376 t----c-tttccat-----ac
i Cercopithecus_lowei.k141_2101310                       I 2 C 0
s Cercopithecus_albogularis.ctg5                                  361499 11 -  39242232 t----c-tttccat-----ac
i Cercopithecus_albogularis.ctg5                               I 2 C 0
s Cercopithecus_mona.ctg39                                  267243 11 +  21565898 t----c-tttccat-----ac
i Cercopithecus_mona.ctg39                               I 2 C 0
s Cercopithecus_neglectus.k141_858615                        28699 11 -     45857 t----c-tttccat-----ac
i Cercopithecus_neglectus.k141_858615                    I 2 C 0
s Cercopithecus_nictitans.k141_2995370                       24488 11 -     32606 t----c-tttccat-----ac
i Cercopithecus_nictitans.k141_2995370                   I 2 C 0
s Cercopithecus_petaurista.k141_42573                          674 11 +      8499 t----c-tttccat-----ac
i Cercopithecus_petaurista.k141_42573                    I 2 C 0
s Cercopithecus_pogonias.k141_6079                           22192 11 +     70610 t----c-tttctat-----ac
i Cercopithecus_pogonias.k141_6079                       I 2 C 0
s Cercopithecus_roloway.k141_3012935                         19052 11 +     36323 t----c-tttccat-----ac
i Cercopithecus_roloway.k141_3012935                     I 2 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10273  6 -     19938 ----------tctg-----tg
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 1
s Cheirogaleus_major.k141_666340                             27672 11 -     33796 t----c-tgtcaat-----ac
i Cheirogaleus_major.k141_666340                         C 0 I 2
s Cheirogaleus_medius.k141_759766                             1859 11 -     15404 t----c-tgtcaat-----ac
i Cheirogaleus_medius.k141_759766                        C 0 I 2
s Cheracebus_lucifer.k141_2312002                             6110 11 -     32913 t----c-tttcagt-----ac
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16523 11 -     40346 t----c-tttcagt-----ac
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16787 11 +    216457 t----c-tttcagt-----ac
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16566 16 +     39636 t----c-tttcagtaccttac
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            982  4 +      5346 t----c-tt------------
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39656 11 -    112038 t----c-tttcggt-----at
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5228 11 +     34062 t----c-tttcggt-----at
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339948 11 +  18827391 t----c-tttccat-----ac
i Chlorocebus_aethiops.ctg25                             I 2 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6559 11 -     44032 t----c-tttccat-----ac
i Chlorocebus_pygerythrus.k141_3063162                   I 2 C 0
s Chlorocebus_sabaeus.CM001947.1                            301274 11 - 135778131 t----c-tttccat-----ac
i Chlorocebus_sabaeus.CM001947.1                         I 2 C 0
s Colobus_angolensis.KN981557.1                             405840 11 -   2368649 t----c-tttccat-----ac
i Colobus_angolensis.KN981557.1                          I 2 C 0
s Colobus_guereza.LG01                                      375003 11 - 200372422 T----C-TTTCCAT-----AC
i Colobus_guereza.LG01                                   I 2 C 0
s Colobus_polykomos.k141_1559707                              5727 11 -      6605 T----C-TTTCCAT-----AC
i Colobus_polykomos.k141_1559707                         I 2 C 0
s Condylura_cristata.JH655891.1                           35804415  6 +  53390261 ----------aaat-----aa
i Condylura_cristata.JH655891.1                          C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9863  6 +     10921 ----------taat-----ac
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129               921  6 +     87169 ----------aaat-----ac
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 8
s Dasypus_novemcinctus.JH564415.1                          2107614  1 -   2246927 ----------T----------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289687 11 +  12879189 t----c-tgtcaat-----at
i Daubentonia_madagascariensis.ctg71                     C 0 I 2
s Desmodus_rotundus.KZ672289.1                            11861330  6 -  20541912 ----------caAT-----AC
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661512  6 -   1390856 ----------caat-----ac
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                  136305  6 -    198055 ----------caat-----ac
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Eidolon_helvum.AWHC01266696.1                               2904  6 +     19438 ----------CACT-----AC
i Eidolon_helvum.AWHC01266696.1                          C 0 I 3
s Elephantulus_edwardii.JH947257.1                         9098635  6 -  10337057 ----------TCTT-----GG
i Elephantulus_edwardii.JH947257.1                       C 0 I 6161
s Enhydra_lutris.KZ291758.1                               24912992  6 +  41312741 ----------caat-----ag
i Enhydra_lutris.KZ291758.1                              C 0 I 7
s Equus_asinus.JREZ01000139.1                              3038473  6 -   4378816 ----------caat-----ac
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               21372407  6 +  39960074 ----------caat-----ac
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                              409193  6 -    498745 ----------caat-----ac
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erythrocebus_patas.Contig38                               259506 11 +  21539334 t----c-tttccat-----ac
i Erythrocebus_patas.Contig38                            I 2 C 0
s Felis_catus.CM001381.2                                 186243349  6 - 206538554 ----------caat-----ac
i Felis_catus.CM001381.2                                 C 0 I 8
s Felis_catus_fca126.CM031415.1                          185113131  6 - 205367284 ----------caat-----ac
i Felis_catus_fca126.CM031415.1                          C 0 I 8
s Felis_nigripes.FelNig_flattened_line_31944                 24479  6 -     30238 ----------caat-----ac
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 8
s Galago_moholi.ctg3793                                     120503 11 -    137831 t----c-tgtcaat-----gt
i Galago_moholi.ctg3793                                  C 0 I 2
s Galago_senegalensis.k141_991736                             4044 11 +     22493 t----c-tgtcaat-----gt
i Galago_senegalensis.k141_991736                        C 0 I 2
s Galagoides_demidoff.k141_561628                            17519 11 +     32986 t----c-tgtcaat-----gc
i Galagoides_demidoff.k141_561628                        C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_74466               16099  6 +     18121 ----------caat-----ac
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 7
s Gorilla_beringei.k141_3358147                               1628 11 -      8343 t----c-tttccat-----ac
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251127 11 - 186649187 t----c-tttccat-----ac
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27455  6 -    327341 ----------aaat-----ac
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 8
s Hipposideros_armiger.JXIK01000431.1                      1546774  6 -   1711038 ----------taat-----ac
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_23202               46093  6 +     49977 ----------TAAC-----AC
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 3
s Hoolock_leuconedys.ctg274                                    139021 11 -    630532 t----c-tttccat-----ac
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65913  6 +     83186 ----------CAAT-----AC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 8
s Hylobates_agilis.k141_1155965                               2055 11 +     12352 t----c-tttccat-----ac
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9238 11 +     55766 t----c-tttccat-----ac
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048576 11 + 191637585 t----c-tttccat-----ac
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797908 11 +  11177569 t----c-tttccat-----ac
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     739 11 -      1527 t----c-tgtcaat-----ac
i Indri_indri.k141_4600452                               C 0 I 2
s Lagothrix_lagothricha.k141_246028                          40371 11 +    110728 t----c-tttcagt-----gc
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1063  1 -     13097 C--------------------
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1014  1 +      5940 C--------------------
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         645  1 -      5717 c--------------------
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7273 11 -     11567 t----c-ttttagt-----tc
i Leontopithecus_chrysomelas.k141_1327670                C 0 I 5
s Leontopithecus_rosalia.k141_349454                          8654 11 -     12945 t----c-ttttagt-----tc
i Leontopithecus_rosalia.k141_349454                     C 0 I 5
s Lepilemur_ankaranensis.k141_567626                          6032 11 +     29618 g----c-cgtcaat-----ac
i Lepilemur_ankaranensis.k141_567626                     C 0 I 2
s Lepilemur_dorsalis.k141_387009                              6029 11 +     31569 g----c-cgtcaat-----ac
i Lepilemur_dorsalis.k141_387009                         C 0 I 2
s Lepilemur_ruficaudatus.k141_330196                          6041 11 +     24756 a----c-tgtcaat-----at
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 2
s Lepilemur_septentrionalis.k141_360456                       6033 11 +     16388 g----c-cgtcaat-----ac
i Lepilemur_septentrionalis.k141_360456                  C 0 I 2
s Leptonychotes_weddellii.KB714746.1                        810346  6 -   3914936 ----------caat-----ac
i Leptonychotes_weddellii.KB714746.1                     C 0 I 7
s Lophocebus_aterrimus.ctg367                               329680 11 -   1826925 t----c-tttccat-----ac
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            3000 12 +     19643 T----TCTGTCAAT-----AT
i Loris_lydekkerianus.k141_2031736                       C 0 I 2
s Loris_tardigradus.ctg83                                  5036659 12 -   6120653 T----TCTGTCAAT-----AT
i Loris_tardigradus.ctg83                                C 0 I 2
s Lycaon_pictus.CM007581.1                                41611527  6 +  59628241 ----------caat-----ac
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_1757516                              41962 11 -     61512 t----c-tttccat-----ac
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369590 11 -  60120075 t----c-tttccat-----ac
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21910 11 +     30207 t----c-tttccat-----ac
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19013 11 -     24934 t----c-tttccat-----ac
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21796 11 +     30527 t----c-tttccat-----ac
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32986 11 -     50087 t----c-tttccat-----ac
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42724 11 +     51645 t----c-tttccat-----ac
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411298 11 - 187317192 t----c-tttccat-----ac
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396181 11 +  25927173 t----c-tttccat-----ac
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45312 11 -     62418 t----c-tttccat-----ac
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22000 11 +     24253 t----c-tttccat-----ac
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41757 11 +     59329 t----c-tttccat-----ac
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267589 11 +    668171 t----c-tttccat-----ac
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18935 11 +     21031 t----c-tttccat-----ac
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32668 11 +     33478 t----c-tttccat-----ac
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219854  6 -    270270 ----------CACT-----AC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 3
s Mandrillus_leucophaeus.scaffold280                        319065 11 +  24302211 t----c-tttccat-----ac
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353897 11 -    752769 t----c-tttccat-----ac
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670558  6 -    737560 ----------ctat-----gc
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                             217853  6 +    317179 ----------ctat-----ac
i Manis_pentadactyla.KN006162.1                          C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                       147034  6 +    207569 ----------cagt-----ac
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_19308             22861  6 -     74585 ----------caat-----ac
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 7
s Mico_argentatus.k141_582562                                 7024 11 +     17804 t----c-tttcagt-----tc
i Mico_argentatus.k141_582562                            C 0 I 5
s Mico_humeralifer.k141_1180625                               7797 11 -     12984 t----c-tttcagt-----tc
i Mico_humeralifer.k141_1180625                          C 0 I 5
s Mico_schneideri.k141_1877700                                     15759 11 -     26561 t----c-tttcagt-----tc
i Mico_schneideri.k141_1877700                                 C 0 I 5
s Microcebus_murinus.CM007674.1                           74981641 11 +  93316391 T----C-TGTCAAT-----AC
i Microcebus_murinus.CM007674.1                          C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_2233                181264  6 +    200668 ----------CAAT-----AC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 3
s Miniopterus_natalensis.LDJU01000308.1                     494480  2 -   1897963 ----------aa---------
i Miniopterus_natalensis.LDJU01000308.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_3531             133915  2 +    183988 ----------aa---------
i Miniopterus_schreibersii.MinSch_scaffold_3531          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19057 11 -     27822 t----c-tttccat-----ac
i Miopithecus_ogouensis.k141_1534655                     C 0 I 8
s Mirounga_angustirostris.MirAng_flattened_line_54046         5355  6 +     27589 ----------caat-----ac
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 7
s Mirza_zaza.k141_766280                                     49499 11 -     62432 t----c-tgtcaat-----ac
i Mirza_zaza.k141_766280                                 C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175449  6 +    366855 ----------CGAT-----AC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Mungos_mungo.MunMun_flattened_line_18455                   15209  6 -     63510 ----------aaat-----ac
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 8
s Mustela_putorius.JH418006.1                             14351800  6 +  14710649 ----------caat-----ac
i Mustela_putorius.JH418006.1                            C 0 I 7
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117043  6 +    130748 ----------tatg-----tg
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 1
s Nasalis_larvatus.k141_1350636                              25374 11 +     34575 t----c-tttccat-----ac
i Nasalis_larvatus.k141_1350636                          I 1 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465740  6 -  31847680 ----------caat-----ac
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 7
s Noctilio_leporinus.NocLep_scaffold_7894                   124115  6 -    149072 ----------CAAT-----AC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 3
s Nomascus_annamensis.k141_1771965                           50317 11 -    132029 t----c-tttccat-----ac
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6413 11 -     16345 t----c-tttccat-----ac
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12297 11 +     22201 t----c-tttccat-----ac
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410633 11 -  22158432 t----c-tttccat-----ac
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22696 11 -     54323 t----c-tttccat-----ac
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195142  6 +   9404916 ----------caat-----ac
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                             93631775 12 + 196305487 T----CCTGTCAAT-----AC
i Nycticebus_bengalensis.LG01                            C 0 I 2
s Nycticebus_coucang.k141_8166032                             1164 12 +      2758 T----CCTGTCAAT-----AC
i Nycticebus_coucang.k141_8166032                        C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560029 12 - 199412804 T----CCTGTCAAT-----AC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 2
s Odobenus_rosmarus.KB229312.1                             1448524  6 +   2017862 ----------caat-----ac
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_171931               5281  6 -     14239 ----------TCTT-----AG
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 5162
s Otocyon_megalotis.JAEUCK010005147.1                        36190  6 +    559221 ----------caat-----ac
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_649260                        35634 11 -     51505 t----c-tgtcaat-----gt
i Otolemur_crassicaudatus.k141_649260                    C 0 I 2
s Otolemur_garnettii.GL873799.1                             348649 11 +   1103335 t----c-tgtcaat-----GT
i Otolemur_garnettii.GL873799.1                          C 0 I 2
s Pan_troglodytes.KZ622849.1                                 29595 12 -    110857 t---tc-tttccat-----ac
i Pan_troglodytes.KZ622849.1                             I 138 I 587
s Panthera_onca.PanOnc_flattened_line_3271                   21069  6 -    230217 ----------caat-----ac
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 8
s Panthera_pardus.KV860321.1                              18458395  6 -  18783137 ----------caat-----ac
i Panthera_pardus.KV860321.1                             C 0 I 8
s Panthera_tigris.KE722367.1                               3969120  6 +   8748460 ----------caat-----ac
i Panthera_tigris.KE722367.1                             C 0 I 8
s Papio_anubis.CM001495.2                                   239908 11 - 183742232 t----c-tttccat-----ac
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6374 11 +     21308 t----c-tttccat-----ac
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287411 11 -  20919399 t----c-tttccat-----ac
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19027 11 -     27687 t----c-tttccat-----ac
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12163 11 +     16796 t----c-tttccat-----ac
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18973 11 -     23640 t----c-tttccat-----ac
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11984  6 +     78924 ----------caat-----at
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 8
s Perodicticus_ibeanus.k141_1921260                          21883 11 +     31479 T----C-TGTCAAT-----AC
i Perodicticus_ibeanus.k141_1921260                      C 0 I 2
s Perodicticus_potto.k141_1854441                            14253 11 -     24908 T----C-TGTCAAT-----AC
i Perodicticus_potto.k141_1854441                        C 0 I 2
s Piliocolobus_badius.k141_2495623                            5831 11 +      7560 t----c-tttccat-----at
i Piliocolobus_badius.k141_2495623                       I 1 C 0
s Piliocolobus_gordonorum.k141_905727                        61538 11 -     63152 T----C-TTTCCAT-----AC
i Piliocolobus_gordonorum.k141_905727                    I 1 C 0
s Piliocolobus_kirkii.k141_579682                            44137 11 +     45295 t----c-tttccat-----ac
i Piliocolobus_kirkii.k141_579682                        I 1 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1816 11 +      5735 t----c-tttccat-----ac
i Piliocolobus_tephrosceles.PDMG02034973.1               I 1 C 0
s Pithecia_albicans.k141_1239476                             62006 11 +    207309 t----c-tttcagt-----ac
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3126 11 -     25401 t----c-tttcagt-----ac
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28841 11 +     58159 t----c-tttcagt-----ac
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29117 11 +     63561 t----c-tttcagt-----ac
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28880 11 +     51148 t----c-tttcagt-----ac
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553873 11 -   4542175 t----c-tttcagt-----ac
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28864 11 +     51125 t----c-tttcagt-----ac
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5284 11 +     39866 t----c-tttcagt-----ac
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           371 11 -      9282 t----c-tttcagt-----ac
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39772 11 -     87950 t----c-tttcagt-----ac
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40165 11 -     88961 t----c-tttcagt-----ac
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4864 11 -     39403 t----c-tttcagt-----ac
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39818 11 +     87928 t----c-tttcagt-----ac
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4862 11 -     60166 t----c-tttcagt-----ac
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11798 11 -     67232 t----c-tttcagt-----ac
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39714 11 -     90634 t----c-tttcagt-----ac
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41182 11 +     89403 t----c-tttcagt-----ac
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174134 11 - 189387572 t----c-tttccat-----ac
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189132 11 -   9816681 t----c-tttccat-----ac
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24315 11 +     69807 C----C-TTTCCAT-----AC
i Presbytis_comata.k141_1230337                          I 1 C 0
s Presbytis_mitrata.k141_584736                              41510 11 -     80239 c----c-tttccat-----ac
i Presbytis_mitrata.k141_584736                          I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563121 10 -   2598838 C----T--GTCAAT-----AC
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 2
s Propithecus_coronatus.k141_209299                            759 10 -      7103 c----t--gtcaat-----ac
i Propithecus_coronatus.k141_209299                      C 0 I 2
s Propithecus_diadema.k141_153680                             1356 10 -     11706 c----t--gtccat-----ac
i Propithecus_diadema.k141_153680                        C 0 I 2
s Propithecus_edwardsi.k141_635656                            5091 10 -     30655 c----t--gtcaat-----ac
i Propithecus_edwardsi.k141_635656                       C 0 I 2
s Propithecus_perrieri.k141_1496898                          31416 10 +     46564 c----t--gtcaat-----ac
i Propithecus_perrieri.k141_1496898                      C 0 I 2
s Propithecus_tattersalli.k141_1127767                       91687 10 -     98465 c----t--gtcaat-----ac
i Propithecus_tattersalli.k141_1127767                   C 0 I 2
s Propithecus_verreauxi.k141_1047036                          5326 10 +     35169 c----t--gtcaat-----ac
i Propithecus_verreauxi.k141_1047036                     C 0 I 2
s Pteronotus_parnellii.KE847780.1                            48510  6 -     66298 ----------caat-----GC
i Pteronotus_parnellii.KE847780.1                        C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1584  6 -     18639 ----------caat-----ag
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 7
s Pteropus_alecto.KB030862.1                               5837487  6 -  28871421 ----------cact-----ac
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Pteropus_vampyrus.KN525825.1                             3534048  6 -   4952924 ----------cact-----ac
i Pteropus_vampyrus.KN525825.1                           C 0 I 3
s Puma_concolor.QAVW01001104.1                            18095946  6 +  38429054 ----------caat-----ac
i Puma_concolor.QAVW01001104.1                           C 0 I 8
s Pygathrix_cinerea.k141_1153803                             23706 11 +     91421 T----C-TTTCCAT-----AC
i Pygathrix_cinerea.k141_1153803                         I 1 C 0
s Pygathrix_nigripes_b.ctg100                                  150199 11 -   7812017 T----C-TTTCCAT-----AC
i Pygathrix_nigripes_b.ctg100                               I 1 C 0
s Pygathrix_nigripes_a.k141_215492                              4576 11 +     72585 t----c-tttccat-----ac
i Pygathrix_nigripes_a.k141_215492                         I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2910134  6 +   3329780 ----------caat-----ac
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 3
s Rhinopithecus_bieti.k119_221883                            25536 11 +     27361 t----c-tttccat-----ac
i Rhinopithecus_bieti.k119_221883                        I 1 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118884 11 + 195417433 t----c-tttccat-----ac
i Rhinopithecus_roxellana.NC_044550.1                    I 1 C 0
s Rhinopithecus_strykeri.ctg102                             233144 11 -   7961872 t----c-tttccat-----ac
i Rhinopithecus_strykeri.ctg102                          I 1 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71510  6 -    116970 ----------cact-----ac
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 3
s Saguinus_bicolor.k141_1429097                                981  1 +     27962 c--------------------
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              994  1 +      6077 c--------------------
i Saguinus_geoffroyi.k141_3779887                        C 0 I 3
s Saguinus_imperator.k141_1898058                             1007  1 +      5971 c--------------------
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1062  1 +      5932 C--------------------
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1208  1 -      2099 C--------------------
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388240  1 - 209938924 c--------------------
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1009  1 +      5979 C--------------------
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1393  1 -      4301 c--------------------
i Saguinus_oedipus.k141_1466288                          C 0 I 3
s Sapajus_apella.ctg103                                     235447 11 +   5703754 t----c-tttcagt-----ac
i Sapajus_apella.ctg103                                  C 0 I 8
s Sapajus_macrocephalus.k141_796559                           5037 11 +     21866 t----c-tttcagt-----ac
i Sapajus_macrocephalus.k141_796559                      C 0 I 8
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113175  6 +    313613 ----------tagt-----at
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 3
s Semnopithecus_entellus.k141_158471                         22023 11 +     27374 t----c-tttccat-----ac
i Semnopithecus_entellus.k141_158471                     I 5 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25542 11 +     58920 t----c-tttccat-----ac
i Semnopithecus_hypoleucos.k141_1910531                  I 5 C 0
s Semnopithecus_johnii.k141_843753                           12038 11 -     45317 t----c-tttccat-----ac
i Semnopithecus_johnii.k141_843753                       I 5 C 0
s Semnopithecus_priam.k141_714795                            19696 11 -     42441 T----C-TTTCCAT-----AC
i Semnopithecus_priam.k141_714795                        I 5 C 0
s Semnopithecus_schistaceus.k141_1432920                     22376 11 -     29113 t----c-tttccat-----ac
i Semnopithecus_schistaceus.k141_1432920                 I 5 C 0
s Semnopithecus_vetulus.k141_244474                          25445 11 -     48123 T----C-TTTCCAT-----AC
i Semnopithecus_vetulus.k141_244474                      I 5 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855865  6 -   1910179 ----------cagc-----ac
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525              3585  6 -     97271 ----------caat-----ac
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 11
s Suricata_suricatta.SurSur_flattened_line_6629             121616  6 +    196729 ----------aaat-----ac
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 8
s Symphalangus_syndactylus.tarseq_199                       387604 11 +   1523678 t----c-tttccat-----ac
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_231636                 559  2 +      3470 ----------aa---------
i Tadarida_brasiliensis.TadBra_scaffold_231636           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_445853                1914  6 -      2009 ----------tttt-----tt
i Tamandua_tetradactyla.TamTet_scaffold_445853           C 0 N 0
s Tapirus_indicus.TapInd_scaffold_7432                      188245  6 +    199430 ----------caat-----ac
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    102196  6 -    539355 ----------caat-----ac
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Theropithecus_gelada.CM009954.1                           349894 11 - 186847797 t----c-tttccat-----ac
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17275  6 -     31044 ----------tctg-----tg
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_294                    476324  6 -    610378 ----------CAAT-----AT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_1189070                        17589 11 +     26378 T----C-TTGCCAT-----AC
i Trachypithecus_auratus.k141_1189070                    I 4 C 0
s Trachypithecus_crepusculus.k141_539312                     30267 15 -     78344 TTTTTC-TTTCCAT-----AC
i Trachypithecus_crepusculus.k141_539312                 I 1 C 0
s Trachypithecus_cristatus.k141_180416                       16910 11 +     25722 t----c-tttccat-----ac
i Trachypithecus_cristatus.k141_180416                   I 4 C 0
s Trachypithecus_francoisi.k141_1453105                      25133 11 -     62838 T----C-TTTCCAT-----AC
i Trachypithecus_francoisi.k141_1453105                  I 1 C 0
s Trachypithecus_geei.k141_1001272                           25250 11 +     46913 t----c-tttccat-----ac
i Trachypithecus_geei.k141_1001272                       I 1 C 0
s Trachypithecus_germaini.k141_57262                          6058 11 -     28527 t----c-tttccat-----ac
i Trachypithecus_germaini.k141_57262                     I 4 C 0
s Trachypithecus_hatinhensis.k141_31479                      27072 11 -     64340 T----C-TTTCCAT-----AC
i Trachypithecus_hatinhensis.k141_31479                  I 1 C 0
s Trachypithecus_laotum.k141_928651                          25109 11 -     63452 T----C-TTTCCAT-----AC
i Trachypithecus_laotum.k141_928651                      I 1 C 0
s Trachypithecus_leucocephalus.k141_96450                     6552 11 +     22490 t----c-tttccat-----ac
i Trachypithecus_leucocephalus.k141_96450                I 2 C 0
s Trachypithecus_obscurus.k141_848057                         6974 13 -     13050 t--ttc-tttccat-----ac
i Trachypithecus_obscurus.k141_848057                    I 1 C 0
s Trachypithecus_phayrei.ctg124                             252209 15 -   6242583 TTTTTC-TTTCCAT-----AC
i Trachypithecus_phayrei.ctg124                          I 1 C 0
s Trachypithecus_pileatus.k141_2862967                       57944 11 +     59866 t----c-tttccat-----ac
i Trachypithecus_pileatus.k141_2862967                   I 1 C 0
s Tupaia_chinensis.KB320699.1                              1830182  6 -   4065304 ----------cagt-----at
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_394                       4734  6 -     70247 ----------CAGT-----AT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_7153                   104404  6 -    105689 ----------TAAT-----AC
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 3
s Ursus_maritimus.KK499267.1                                178477  6 +   5085361 ----------caat-----ac
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_787544                                  22193  9 -     30710 -------tgtcaat-----ac
i Varecia_rubra.k141_787544                              I 1 I 2
s Varecia_variegata.k141_289850                              21100  9 -    147434 -------tgtcaat-----ac
i Varecia_variegata.k141_289850                          I 1 I 2
s Vulpes_lagopus.VulLag_flattened_line_12041                101908  6 -    112863 ----------caat-----ac
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732         25744  6 -     86975 ----------caat-----ac
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tarsius_wallacei.k141_226975                                4353  0 +     20590 C
e Tarsius_lariang.k141_1780720                                4314  0 +      6850 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               378852 458 +   4330536 I
e Myotis_davidii.KB100139.1                                4383241 234 +   6019432 I
e Myotis_brandtii.KE162005.1                               9788622 460 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          34604 32 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12574705 34 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Cephalopachus_bancanus.k141_72622                            791  0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Carlito_syrichta.NW_007259797.1                           267622  0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1285 42 +     36723 CTTCC---------------------TTT--TT-TG-------------------------ATATATTTTAGATTGT-----------------------------CTCTGC-TTATC----TT---------C
s Acinonyx_jubatus.LLWD01001279.1                           809698 38 +   1699592 --------------------------------t-tt-------------------------g---------------gtggga-cag-t---at-ct-caggttatttttgctt-------att---------t
i Acinonyx_jubatus.LLWD01001279.1                        I 8 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20411960 45 +  29979442 -ctct---------------------ctc--ct-tt-------------------------g---------------g-g--acgtggt---at-ct-cagatcatctttgctt-------att---------t
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44574 42 +     53615 cttcg---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40396 42 +     44087 cttcg---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13100 42 -     21945 cttcg---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14778 42 +     32033 cttcg---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69343 31 -     84148 ----------------------------------tg--------------------------tatattttagattgt-----------------------------ctcttc-ttatc----tt---------c
i Alouatta_belzebul.k141_1011583                         I 9 C 0
s Alouatta_caraya.k141_1109140                               41569 31 -     78289 ----------------------------------tg--------------------------tatattttagattgt-----------------------------ctgtgc-ttatt----tt---------c
i Alouatta_caraya.k141_1109140                           I 9 C 0
s Alouatta_discolor.k141_2561099                             41017 31 +     55831 ----------------------------------tg--------------------------tatattttagattgt-----------------------------ctcttc-ttatc----tt---------c
i Alouatta_discolor.k141_2561099                         I 9 C 0
s Alouatta_juara.k141_1687208                                39455 31 -     64179 ----------------------------------tg--------------------------tatattttagattgt-----------------------------ctcttc-ttatc----tt---------c
i Alouatta_juara.k141_1687208                            I 9 C 0
s Alouatta_macconnelli.k141_361275                           21101 31 -     24835 ----------------------------------tg--------------------------tatattttagattgt-----------------------------ctcttc-ttatc----tc---------c
i Alouatta_macconnelli.k141_361275                       I 9 C 0
s Alouatta_nigerrima.k141_376068                             38084 31 +     45454 ----------------------------------tg--------------------------tatattttagattgt-----------------------------ctcttc-ttatc----tt---------c
i Alouatta_nigerrima.k141_376068                         I 9 C 0
s Alouatta_palliata.k141_638677                              43783 31 +     70886 ----------------------------------tg--------------------------tatattttagattgt-----------------------------ctcttc-ttatc----tt---------c
i Alouatta_palliata.k141_638677                          I 9 C 0
s Alouatta_puruensis.k141_251022                              5907 31 +     30854 ----------------------------------tg--------------------------tatattttagattgt-----------------------------ctcttc-ttatc----tt---------c
i Alouatta_puruensis.k141_251022                         I 9 C 0
s Alouatta_seniculus.k141_928287                             30046 31 +     42133 ----------------------------------tg--------------------------tatattttagattgt-----------------------------ctcttc-ttatc----tt---------c
i Alouatta_seniculus.k141_928287                         I 9 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173303 18 -    412891 ---------------------------at--ta-tg-------------------------g--------------------------------------------gggtga-t-------att---------t
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Aotus_azarae.k141_118258                                   47849 41 -     65372 cttcc---------------------ctt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41594 41 +     43593 cttcc---------------------ctt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669607 41 +   5030052 ctttc---------------------ctt--tt-tg--------------------------tatattttagattgT-----------------------------CTCTGC-TTATC----TT---------C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21249 41 -     23494 cttcc---------------------ctt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6385 41 +      8415 cttcc---------------------ctt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16452 42 -     45910 CTCCC---------------------TTT--tt-ct-------------------------gtggatgtcatattgt-----------------------------ctttgc-ttatc----tt---------c
i Arctocebus_calabarensis.k141_1364444                   I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  1609 18 -     15198 ---------------------------TT--TA-TG-------------------------G--------------------------------------------GGGTAA-T----A---TT---------T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 3 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271835 41 +  21539123 cttcc---------------------ttt--tt-tg--------------------------tatgttttagatggt-----------------------------ctctgc-ttatc----tt---------c
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8003 41 +     48076 cttcc---------------------ttt--tt-tg--------------------------tatattttagatggt-----------------------------ctctgc-ttatc----tt---------c
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3139 41 -     28759 cttcc---------------------ttt--tt-tg--------------------------tatattttagatggt-----------------------------ctctgc-ttatc----tt---------c
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30692 41 +     44353 cttcc---------------------ttt--tt-tg--------------------------tatgttttagatggt-----------------------------ctctgc-ttatc----tt---------c
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46064 41 -     71267 cttcc---------------------ttt--tt-tg--------------------------tatattttagatggt-----------------------------ctctgc-ttatc----tc---------c
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20123 41 -     33135 cttcc---------------------ttt--tt-tg--------------------------tatgttttagatggt-----------------------------ctctgc-ttatc----tt---------c
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3258 42 +     11645 ctccc---------------------ttt--tt-ct-------------------------gtttgtttcagattgt-----------------------------ctttac-ttatc----tt---------c
i Avahi_laniger.k141_2756659                             I 2 C 0
s Avahi_peyrierasi.k141_1823318                               3259 42 -     19611 ctccc---------------------ttt--tt-ct-------------------------gtttgtttcagattgt-----------------------------ctttac-ttatc----tt---------c
i Avahi_peyrierasi.k141_1823318                          I 2 C 0
s Cacajao_ayresi.k141_96119                                   5027 41 +     28062 cctcc---------------------ttt--tt-ag--------------------------tatattttagatcgt-----------------------------ctccgc-taatc----tt---------c
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40321 41 -     91139 cctcc---------------------ttt--tc-ag--------------------------tatattttagatcgt-----------------------------ctccgc-taatc----tt---------c
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17847 41 +     95584 cctcc---------------------ttt--tt-ag--------------------------tatattttagatcgt-----------------------------ctccgc-taatc----tt---------c
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17760 41 +    119600 cctcc---------------------ttt--tt-ag--------------------------tatattttagatcgt-----------------------------ctccgc-taatc----tt---------c
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7257 35 +     18648 ---------------------------tt--tt-tg--------------------------tatatttcagattgt-----------------------------ctctgc-ttatc----tt---------c
i Callibella_humilis.k141_1233062                        I 5 C 0
s Callimico_goeldii.k141_1609886                              6941 35 -     13885 ---------------------------tt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Callimico_goeldii.k141_1609886                         I 5 C 0
s Callithrix_geoffroyi.k119_473390                           15618 35 +     17162 ---------------------------tt--tt-ag--------------------------tatatttcagattgt-----------------------------ctctgc-ttatc----tt---------c
i Callithrix_geoffroyi.k119_473390                       I 5 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450573 35 + 189096842 ---------------------------TT--TT-TG--------------------------TATATTTCAGATTGT-----------------------------CTCTGC-TTATC----TT---------C
i Callithrix_jacchus.pat_scaffold_3                      I 5 C 0
s Callithrix_kuhlii.k119_404482                              16866 35 -     18408 ---------------------------tt--tt-tg--------------------------tatatttcagattgt-----------------------------ctctgc-ttatc----tt---------c
i Callithrix_kuhlii.k119_404482                          I 5 C 0
s CanFam4.chr16                                           42502263 45 +  60362399 -cccc---------------------tct--gt-tt-------------------------g---------------g-gggaggtggt---at-ct-ca--tcatcttggctt-------att---------t
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5893 45 -     23171 -cccc---------------------tct--gt-tt-------------------------g---------------g-gggaggtggt---at-ct-ca--tcatcttggctt-------att---------t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219254 45 +   9314153 -cccc---------------------tct--gt-tt-------------------------g---------------g-gggaggtggt---at-ct-ca--tcatcttggctt-------att---------t
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            41612379 45 +  59632846 -cccc---------------------tct--gt-tt-------------------------g---------------g-gggaggtggt---at-ct-ca--tcatcttggctt-------att---------t
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            45103949 45 -  63665305 -cccc---------------------tct--gt-tt-------------------------g---------------g-gggaggtggt---at-ct-ca--tcatcttggctt-------att---------t
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               1695 18 +      5315 ---------------------------ct--ta-tg-------------------------g--------------------------------------------gggtga-t-------att---------t
i Carollia_perspicillata.CarPer_scaffold_170178          I 3 C 0
s Cebuella_niveiventris.k141_592277                           2152 35 -     12580 ---------------------------tt--tt-tg--------------------------tatatttcagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cebuella_niveiventris.k141_592277                      I 5 C 0
s Cebuella_pygmaea.k141_145798                               40038 35 +     53515 ---------------------------tt--tt-tg--------------------------tatatttcagattgt-----------------------------ctctgt-ttatc----tt---------c
i Cebuella_pygmaea.k141_145798                           I 5 C 0
s Cebus_albifrons.Contig27                                  368243 32 -  26074798 --------------------------------t-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cebus_albifrons.Contig27                               I 8 C 0
s Cebus_olivaceus.k141_1404781                                5132 32 -     34880 --------------------------------t-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cebus_olivaceus.k141_1404781                           I 8 C 0
s Cebus_unicolor.k141_1654760                                64227 32 -     89041 --------------------------------t-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cebus_unicolor.k141_1654760                            I 8 C 0
s Ceratotherium_simum.JH767749.1                          15489235 10 -  27778364 ---cc---------------------ttt--tt-tt-------------------------g------------------------------------------------------------------------
i Ceratotherium_simum.JH767749.1                         I 1 I 13
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16068 10 +     27315 ---cc---------------------ttt--tt-tt-------------------------g------------------------------------------------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 1 I 13
s Cercocebus_atys.KQ010504.1                                137735 42 -   4669795 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgT-----------------------------CTCTAC-TTATC----TT---------C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41475 42 +     47900 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41308 42 -     44860 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41291 42 -    148725 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24354 42 -     40656 cttca---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4290 42 +     20796 cttca---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8546 42 -     17524 cttca---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24234 42 -     34525 cttca---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8944 42 -     25376 cttca---------------------ttt--ta-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361510 42 -  39242232 cttca---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267254 42 +  21565898 cttca---------------------ttt--ta-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28710 42 -     45857 cttca---------------------ttt--ta-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24499 42 -     32606 cttca---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          685 42 +      8499 cttca---------------------ttt--ta-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22203 42 +     70610 cttcg---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19063 42 +     36323 cttca---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10280 23 -     19938 -ttgt---------------------aag--tt-tt-------------------------g--------------------------------------------cttttc-t-------ttt---------c
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 1 C 0
s Cheirogaleus_major.k141_666340                             27685 42 -     33796 ctccc---------------------ttt--tt-ct-------------------------gtatgtttcagattgt-----------------------------ctttgc-ttatc----tt---------c
i Cheirogaleus_major.k141_666340                         I 2 C 0
s Cheirogaleus_medius.k141_759766                             1872 42 -     15404 ctccc---------------------ttt--tt-ct-------------------------atatgtttcagattgt-----------------------------ctttgc-ttatc----tt---------c
i Cheirogaleus_medius.k141_759766                        I 2 C 0
s Cheracebus_lucifer.k141_2312002                             6121 41 -     32913 cttcc---------------------ttt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----ct---------c
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16534 41 -     40346 cttcc---------------------ttt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----ct---------c
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16798 41 +    216457 cttcc---------------------ttt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----ct---------c
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16582 41 +     39636 cttcc---------------------ttt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----ct---------c
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                            986 37 +      5346 ---cc---------------------ttt--tt--c--------------------------tatattttagattct-----------------------------ccctgc-gtgtc----tt---------c
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39667 41 -    112038 cttcc---------------------ttt--tc-ag--------------------------tatattttagatcgt-----------------------------ctccgc-taatc----tt---------c
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5239 41 +     34062 cttcc---------------------ttt--tc-ag--------------------------tatattttagatcgt-----------------------------ctccgc-taatc----tt---------c
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                339959 42 +  18827391 cttca---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6570 42 -     44032 cttca---------------------ttt--tt-aa-------------------------atatattttacattgt-----------------------------ctctgc-ttatc----tt---------c
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301285 42 - 135778131 cttca---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------CTCTGC-TTATC----TT---------C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405851 41 -   2368649 cttcg---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctcTGC-TTATC----TT---------C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375014 41 - 200372422 CTTCG---------------------TT---TT-TA-------------------------ATAtattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5738 41 -      6605 CTTCG---------------------TT---TT-TA-------------------------ATAtattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804424 51 +  53390261 -ctat---------------------ttt--tt-ttggggggggggatataTTTCAGATCAA--------------------------------------------CTTTGC-T----AATGTT---------C
i Condylura_cristata.JH655891.1                          I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9872 19 +     10921 ---------------------------tt-ttt-tg-------------------------g--------------------------------------------gggATA-T----A---TT---------T
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129               935 39 +     87169 --------------------------------t-tt-------------------------g---------------g-tg-a--tggtggtat-ct-cagattatttttgctt-------ttt---------t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 8 C 0
s Dasypus_novemcinctus.JH564415.1                          2107615 21 -   2246927 --GC----------------------GAG--TT-TT-------------------------A--------------------------------------------CTTTGC-T------T-TT---------C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289700 42 +  12879189 ctccc---------------------ttt--tc-ct-------------------------gtatgtttcagattgt-----------------------------ctttgc-ttatc----tt---------c
i Daubentonia_madagascariensis.ctg71                     I 2 C 0
s Desmodus_rotundus.KZ672289.1                            11861339 18 -  20541912 ---------------------------CT--TA-TG-------------------------G--------------------------------------------GGGCGA-T----A---TT---------T
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Echinops_telfairi.JH980293.1                            62850737  3 - 111700974 --------------------------------------------------------------------------------------------------------------------------tt---------c
i Echinops_telfairi.JH980293.1                           N 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661519 10 -   1390856 ---cc---------------------ttt--tt-tt-------------------------g------------------------------------------------------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 I 13
s Diceros_bicornis.DicBicMic_scaffold_5955                  136312 10 -    198055 ---cc---------------------ttt--tt-tt-------------------------g------------------------------------------------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 I 13
s Eidolon_helvum.AWHC01266696.1                               2913 19 +     19438 ---------------------------TT-CTC-TG-------------------------g--------------------------------------------ggaata-t-------gtt---------t
i Eidolon_helvum.AWHC01266696.1                          I 3 C 0
s Elephantulus_edwardii.JH947257.1                         9104802 23 -  10337057 -tttttc-------------a-ga--agt--gcttt-------------------------g--------------------------------------------cttat-----------------------
i Elephantulus_edwardii.JH947257.1                       I 6161 I 2
s Enhydra_lutris.KZ291758.1                               24913005 37 +  41312741 -----------------------------------t-------------------------g---------------g-ggg-g--aatggtat-ct-cagatcatctttgatt-------att---------t
i Enhydra_lutris.KZ291758.1                              I 7 C 0
s Equus_asinus.JREZ01000139.1                              3038480 39 -   4378816 ---cc---------------------ttt--tt-tt-------------------------g---------------g-g-----tg-t---at-tt-cagatgatctttgctt-------atc---------a
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               21372414 39 +  39960074 ---cc---------------------ttt--tt-tt-------------------------g---------------g-g-----tg-t---at-tt-cagatgatctttgctt-------atc---------a
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                              409200 39 -    498745 ---cc---------------------ttt--tt-tt-------------------------g---------------g-g-----tg-t---at-tt-cagatgatctttgctt-------atc---------a
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erythrocebus_patas.Contig38                               259517 42 +  21539334 ctttg---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243363 38 - 206538554 --------------------------------t-tt-------------------------g---------------gtgggacg-g-t---at-ct-caggttatttttgctt-------att---------t
i Felis_catus.CM001381.2                                 I 8 C 0
s Felis_catus_fca126.CM031415.1                          185113145 38 - 205367284 --------------------------------t-tt-------------------------g---------------gtgggacg-g-t---at-ct-caggttatttttgctt-------att---------t
i Felis_catus_fca126.CM031415.1                          I 8 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24493 38 -     30238 --------------------------------t-tt-------------------------g---------------gtgggacg-g-t---at-ct-caggttatttttgctt-------att---------t
i Felis_nigripes.FelNig_flattened_line_31944             I 8 C 0
s Galago_moholi.ctg3793                                     120516 43 -    137831 ttccc-c-------------------ttt--tt-ct-------------------------GTAGGtgtcaaattgt-----------------------------ctttgc-ttatc----tt---------c
i Galago_moholi.ctg3793                                  I 2 C 0
s Galago_senegalensis.k141_991736                             4057 43 +     22493 ctccc-c-------------------ttt--tt-ct-------------------------gTAGGtgtcaaattgt-----------------------------ctttgc-ttatc----tt---------c
i Galago_senegalensis.k141_991736                        I 2 C 0
s Galagoides_demidoff.k141_561628                            17532 43 +     32986 ctccc-c-------------------ttt--tt-CT-------------------------GTAGGTGTCAAATTGT-----------------------------CTTTGC-TTATC----TT---------C
i Galagoides_demidoff.k141_561628                        I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16112 42 +     18121 ccccc---------------------ttt--tt-tt-------------------------gtgtattttagactgt-----------------------------ctttgc-ttatc----tt---------c
i Galeopterus_variegatus.GalVar_scaffold_74466           I 7 C 0
s Gorilla_beringei.k141_3358147                               1639 51 -      8343 ctccc---------------------ttt--tt-tg-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----ttctgtagccac
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251138 42 - 186649187 cttcc---------------------ttt--tt-tg-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27469 39 -    327341 --------------------------------t-tt-------------------------g---------------g-tgg-gg-g-tggtat-ct-cagatggattttgctt-------att---------t
i Helogale_parvula.HelPar_flattened_line_2585            I 8 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546783 16 -   1711038 ----------------------------TT-TT-TG-------------------------G--------------------------------------------GG--TA-T----A---TT---------T
i Hipposideros_armiger.JXIK01000431.1                    I 3 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               46102 17 +     49977 ---------------------------ATT-TT-TA-------------------------G--------------------------------------------GG--TG-T----A---TT---------T
i Hipposideros_galeritus.HipGal_scaffold_23202           I 3 C 0
s Hoolock_leuconedys.ctg274                                    139032 42 -    630532 cttcc---------------------ttt--tt-tg-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65927 39 +     83186 --------------------------------T-TT-------------------------G-------------------GTGGGGGTGGTAT-CT-CCTATTATTtttgctt-------att---------t
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 8 C 0
s Hylobates_agilis.k141_1155965                               2066 42 +     12352 cttcc---------------------ttt--tt-tg-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9249 42 +     55766 cttcc---------------------ttt--tt-tg-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048587 42 + 191637585 cttcc---------------------ttt--tt-tg-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797919 42 +  11177569 cttcc---------------------ttt--tt-tg-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     752 42 -      1527 ctccc---------------------ttt--tt-ct-------------------------gtatgtttcagattgt-----------------------------ctttac-ttatc----tt---------c
i Indri_indri.k141_4600452                               I 2 C 0
s Lagothrix_lagothricha.k141_246028                          40382 41 +    110728 cttcc---------------------ttt--tc-tg--------------------------tgtattttagatggt-----------------------------ctctgc-ttatc----tt---------c
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1064 39 -     13097 --TTC---------------------CTT--TT-TG--------------------------TATATTTTAGAGTGT-----------------------------CTCTGC-TTATC----TT---------C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1015 39 +      5940 --TTC---------------------CTT--TT-TG--------------------------TATATTTTAGAGTGT-----------------------------CTCTGC-TTATC----TT---------C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         646 39 -      5717 --ttc---------------------ctt--tt-tg--------------------------tatattttagagtgt-----------------------------ctctgc-ttatc----tt---------c
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7289 35 -     11567 ---------------------------tt--tt-tg--------------------------catattttagattgt-----------------------------ctctgc-ttatc----gt---------c
i Leontopithecus_chrysomelas.k141_1327670                I 5 C 0
s Leontopithecus_rosalia.k141_349454                          8670 35 -     12945 ---------------------------tt--tt-tg--------------------------catattttagattgt-----------------------------ctctgc-ttatc----gt---------c
i Leontopithecus_rosalia.k141_349454                     I 5 C 0
s Lepilemur_ankaranensis.k141_567626                          6045 42 +     29618 ctccc---------------------ttt--tt-ct-------------------------gtatgtttcagattgt-----------------------------ctttgc-ttatc----tt---------c
i Lepilemur_ankaranensis.k141_567626                     I 2 C 0
s Lepilemur_dorsalis.k141_387009                              6042 42 +     31569 ctccc---------------------ttt--tt-ct-------------------------gtatgcttcagattgt-----------------------------ctttgc-ttatc----tt---------c
i Lepilemur_dorsalis.k141_387009                         I 2 C 0
s Lepilemur_ruficaudatus.k141_330196                          6054 42 +     24756 ctccc---------------------ttt--tt-ct-------------------------gtatgtttcagattgt-----------------------------ctttgc-ttatc----tt---------c
i Lepilemur_ruficaudatus.k141_330196                     I 2 C 0
s Lepilemur_septentrionalis.k141_360456                       6046 42 +     16388 ctccc---------------------ttt--tt-ct-------------------------gtatgcttcagattgt-----------------------------ctttgc-ttatc----tt---------c
i Lepilemur_septentrionalis.k141_360456                  I 2 C 0
s Leptonychotes_weddellii.KB714746.1                        810359 39 -   3914936 -----------------------------------t-------------------------g---------------g-ggg-gggggtggtat-ct-cagatcatttttgctt-------att---------t
i Leptonychotes_weddellii.KB714746.1                     I 7 C 0
s Lophocebus_aterrimus.ctg367                               329691 42 -   1826925 cttcc---------------------ttt--tt-ta-------------------------atatattttagatggt-----------------------------ctctac-ttatc----gt---------c
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            3014 38 +     19643 CTCCC---------------------TTT--TT-CT-------------------------GTGGGTGTCAGATATT-----------------------------CTTT-----ATC----TT---------C
i Loris_lydekkerianus.k141_2031736                       I 2 C 0
s Loris_tardigradus.ctg83                                  5036673 38 -   6120653 CTCCC---------------------TTT--TT-CT-------------------------GTGGGTGTCAGATAtt-----------------------------cttt-----atc----tt---------c
i Loris_tardigradus.ctg83                                I 2 C 0
s Lycaon_pictus.CM007581.1                                41611534 45 +  59628241 -cccc---------------------tct--gt-tt-------------------------g---------------g-gggaggtggt---at-tt-ca--tcatcttggctt-------att---------t
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_1757516                              41973 42 -     61512 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369601 42 -  60120075 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21921 42 +     30207 cttcc---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19024 42 -     24934 cttcc---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21807 42 +     30527 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 32997 42 -     50087 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42735 42 +     51645 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411309 42 - 187317192 cttcc---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------CTCTAC-TTATC----TT---------C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396192 42 +  25927173 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgC-----------------------------CTCTAC-TTATC----TT---------C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45323 42 -     62418 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22011 42 +     24253 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41768 42 +     59329 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267600 42 +    668171 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18946 42 +     21031 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32679 42 +     33478 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219863 19 -    270270 ---------------------------TTT-TC-TG-------------------------G--------------------------------------------GGAGTA-T----A---TT---------T
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 3 C 0
s Mandrillus_leucophaeus.scaffold280                        319076 42 +  24302211 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353908 42 -    752769 cttcc---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670565 49 -    737560 -cccc---------------------ttt--tt-tt-------------------------g---------------g-ggg-ggtgg-g-tagacttcaggtcatctttgcat-------gtc---------t
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                             217860 10 +    317179 -cccc---------------------ttt--tt-t---------------------------------------------------------------------------------------------------
i Manis_pentadactyla.KN006162.1                          I 1 I 36
s Megaderma_lyra.MegLyr_scaffold_4542                       147043  6 +    207569 ---------------------------tt-ttt-g---------------------------------------------------------------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 I 11
s Mellivora_capensis.MelCap_flattened_line_19308             22874 37 -     74585 -----------------------------------t-------------------------g---------------g-ggg-g--aatggtat-ct-cagatcatctttgatt-------att---------t
i Mellivora_capensis.MelCap_flattened_line_19308         I 7 C 0
s Mico_argentatus.k141_582562                                 7040 35 +     17804 ---------------------------tt--tt-tg--------------------------tatatttcagattgt-----------------------------ctctgc-ttatc----tt---------c
i Mico_argentatus.k141_582562                            I 5 C 0
s Mico_humeralifer.k141_1180625                               7813 35 -     12984 ---------------------------tt--tt-tg--------------------------tatatttcagattgt-----------------------------ctctgc-ttatc----tt---------c
i Mico_humeralifer.k141_1180625                          I 5 C 0
s Mico_schneideri.k141_1877700                                     15775 35 -     26561 ---------------------------tt--tt-tg--------------------------tatatttcagattgt-----------------------------ctctgc-ttatc----tt---------c
i Mico_schneideri.k141_1877700                                 I 5 C 0
s Microcebus_murinus.CM007674.1                           74981654 42 +  93316391 CTCCC---------------------TTT--TT-CT-------------------------GTATGTTTCAGATCAT-----------------------------CTTTGC-TTATC----TT---------C
i Microcebus_murinus.CM007674.1                          I 2 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41029  7 +    145209 ---------------------------ct--atttt--------------------------------------------------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                N 0 I 16
s Micronycteris_hirsuta.MicHir_scaffold_2233                181273 18 +    200668 ---------------------------CT--TA-TG-------------------------G--------------------------------------------GGGTGA-T----A---TT---------T
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 3 C 0
s Miniopterus_natalensis.LDJU01000308.1                     494482 16 -   1897963 -------------------------------aa-tg-------------------------g--------------------------------------------ggttaa-t-------aac---------t
i Miniopterus_natalensis.LDJU01000308.1                  C 0 I 106
s Miniopterus_schreibersii.MinSch_scaffold_3531             133917 16 +    183988 -------------------------------aa-tg-------------------------g--------------------------------------------ggttaa-t-------aac---------t
i Miniopterus_schreibersii.MinSch_scaffold_3531          C 0 I 106
s Miopithecus_ogouensis.k141_1534655                         19076 34 -     27822 -------------------------------tt-aa-------------------------atacattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Miopithecus_ogouensis.k141_1534655                     I 8 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5368 39 +     27589 -----------------------------------t-------------------------g---------------g-gtg-gggggtggtat-ct-cagatcatttttgctt-------att---------t
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 7 C 0
s Mirza_zaza.k141_766280                                     49512 42 -     62432 ttccc---------------------ttt--tt-ct-------------------------gtatgtttcagattgt-----------------------------ctttgc-ttatc----tt---------c
i Mirza_zaza.k141_766280                                 I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175458 18 +    366855 ---------------------------CT--TG-TG-------------------------G--------------------------------------------AGTATT-G-------GTT---------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15223 39 -     63510 --------------------------------t-tt-------------------------g---------------g-tgg-gg--atggtat-ct-cagatggattttgctt-------att---------t
i Mungos_mungo.MunMun_flattened_line_18455               I 8 C 0
s Mustela_putorius.JH418006.1                             14351813 37 +  14710649 -----------------------------------t-------------------------g---------------g-ggg-g--aatggtat-ct-cagatcatctttgatt-------gtt---------t
i Mustela_putorius.JH418006.1                            I 7 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117050 23 +    130748 -ctgc---------------------aaa--tt-tt-------------------------g--------------------------------------------cttttc-t-------ttt---------c
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 1 C 0
s Nasalis_larvatus.k141_1350636                              25385 41 +     34575 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465753 40 -  31847680 -----------------------------------t-------------------------g---------------g-gggaggtggtggtat-ct-cagatcatttttgctt-------att---------t
i Neomonachus_schauinslandi.NINY01007730.1               I 7 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   124124 18 -    149072 ---------------------------CT--TT-TG-------------------------G--------------------------------------------GGTTTA-T----A---GT---------T
i Noctilio_leporinus.NocLep_scaffold_7894                I 3 C 0
s Nomascus_annamensis.k141_1771965                           50328 42 -    132029 cttcc---------------------ttt--tt-tg-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6424 42 -     16345 cttcc---------------------ttt--tt-tg-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12308 42 +     22201 cttcc---------------------ttt--tt-tg-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410644 42 -  22158432 cttcc---------------------ttt--tt-tg-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22707 42 -     54323 cttcc---------------------ttt--tt-tg-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195149 45 +   9404916 -cccc---------------------tct--gt-tt-------------------------g---------------g-gggaggtggt---at-ct-ca--tcatcttggctt-------att---------t
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                             93631789 42 + 196305487 CTCCC---------------------TTT--tt-ct-------------------------gtgggtgtcagattgt-----------------------------ctttgc-ttatc----tt---------c
i Nycticebus_bengalensis.LG01                            I 2 C 0
s Nycticebus_coucang.k141_8166032                             1178 42 +      2758 CTCCC---------------------TTT--tt-ct-------------------------gtgggtgtcagattgt-----------------------------ctttgc-ttatc----tt---------c
i Nycticebus_coucang.k141_8166032                        I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560043 42 - 199412804 CTCCC---------------------TTT--tt-ct-------------------------gtgggtgtcagattgt-----------------------------ctttgc-ttatc----tt---------c
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 2 C 0
s Odobenus_rosmarus.KB229312.1                             1448531 49 +   2017862 -cctc---------------------ttt--gt-tt-------------------------g---------------g-ggg-ggtggtggtat-ct-cagatcatttttgctt-------att---------t
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              10449 39 -     14239 -tttttcggtggtgggggggaagagatgt--atttt-------------------------g--------------------------------------------cttat-----------------------
i Orycteropus_afer.OryAfe_flattened_line_171931          I 5162 I 4
s Otocyon_megalotis.JAEUCK010005147.1                        36197 45 +    559221 -cccc---------------------tct--gt-tt-------------------------g---------------g-gggaggtggt---at-ct-ca--tcatcttggctt-------att---------t
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_649260                        35647 43 -     51505 ctccc-c-------------------ttt--tt-ct-------------------------GTAGGtgtcgaattgt-----------------------------ctttgc-ttatc----tt---------c
i Otolemur_crassicaudatus.k141_649260                    I 2 C 0
s Otolemur_garnettii.GL873799.1                             348662 43 +   1103335 CTCCC--------------------CTTT--TT-CT-------------------------GTAGGTGTCAAATTGT-----------------------------CTTTGC-TTATC----TT---------C
i Otolemur_garnettii.GL873799.1                          I 2 C 0
s Pan_troglodytes.CM009242.2                               1468527 42 - 189151597 cttcc---------------------ttt--tt-tg-------------------------atatattttagatTGT-----------------------------CTCTGC-TTATC----TT---------C
i Pan_troglodytes.CM009242.2                             I 10 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21083 38 -    230217 --------------------------------t-tt-------------------------g---------------gtgggacg-g-t---at-ct-caggttatttttgctt-------att---------t
i Panthera_onca.PanOnc_flattened_line_3271               I 8 C 0
s Panthera_pardus.KV860321.1                              18458409 38 -  18783137 --------------------------------t-tt-------------------------g---------------gtgggacg-g-t---at-ct-caggttatttttgctt-------att---------t
i Panthera_pardus.KV860321.1                             I 8 C 0
s Panthera_tigris.KE722367.1                               3969134 38 +   8748460 --------------------------------t-tt-------------------------g---------------gtgggacg-g-t---at-ct-caggttatttttgctt-------att---------t
i Panthera_tigris.KE722367.1                             I 8 C 0
s Papio_anubis.CM001495.2                                   239919 42 - 183742232 cttcc---------------------ttt--tt-aa-------------------------atatattttagatggT-----------------------------CTCTAC-TTATC----GT---------C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6385 42 +     21308 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgt-----------------------------ctctac-ttatc----tt---------c
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287422 42 -  20919399 cttcc---------------------ttt--tt-aa-------------------------atatattttagatggt-----------------------------ctctac-ttatc----gt---------c
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19038 42 -     27687 cttcc---------------------ttt--tt-aa-------------------------atatattttagattgt-----------------------------ctctac-ttatc----gt---------c
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12174 42 +     16796 cttcc---------------------ttt--tt-aa-------------------------atatattttagatggt-----------------------------ctctac-ttatc----gt---------c
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 18984 42 -     23640 cttcc---------------------ttt--tt-ta-------------------------atatattttagatggt-----------------------------ctctac-ttatc----gt---------c
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     11998 37 +     78924 --------------------------------t-tt-------------------------g---------------g-tgg-ggtggt---at-ct-cagattattttt-ctt-------gtt---------t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 8 C 0
s Perodicticus_ibeanus.k141_1921260                          21896 42 +     31479 CTCCC---------------------TTT--tt-ct-------------------------gtggatgtcatattgt-----------------------------ctttgc-ttatc----tt---------c
i Perodicticus_ibeanus.k141_1921260                      I 2 C 0
s Perodicticus_potto.k141_1854441                            14266 42 -     24908 CTCCC---------------------TTT--tt-ct-------------------------gtggatgtcatattgt-----------------------------ctttgc-ttatc----tt---------c
i Perodicticus_potto.k141_1854441                        I 2 C 0
s Piliocolobus_badius.k141_2495623                            5842 41 +      7560 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61549 41 -     63152 CTTCC---------------------TT---TT-TA-------------------------ATAtattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44148 41 +     45295 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1827 41 +      5735 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctcTGC-TTATC----TT---------C
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62017 41 +    207309 cttcc---------------------ttt--tt-ag--------------------------tatattttagattgt-----------------------------ctccgc-taatc----tg---------c
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3137 41 -     25401 cttcc---------------------ttt--tt-ag--------------------------tatattttagattgt-----------------------------ctccgc-taatc----tg---------c
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28852 41 +     58159 cttcc---------------------ttt--tt-ag--------------------------tatattttagattgt-----------------------------ctccgc-taatc----tg---------c
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29128 41 +     63561 cttcc---------------------ttt--tt-ag--------------------------tatattttagattgt-----------------------------ctccgc-taatc----tg---------c
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28891 41 +     51148 cttcc---------------------ttt--tt-ag--------------------------tatattttagattgt-----------------------------ctctgc-taatc----tg---------c
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553884 41 -   4542175 cttcc---------------------ttt--tt-ag--------------------------tatattttagattgt-----------------------------ctccgc-taatc----tg---------c
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28875 41 +     51125 cttcc---------------------ttt--tt-ag--------------------------tatattttagattgt-----------------------------ctccgc-taatc----tg---------c
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5295 41 +     39866 cttcc---------------------ttt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----ct---------c
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           382 41 -      9282 cttcc---------------------ttt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----ct---------c
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39783 41 -     87950 cttcc---------------------ttt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----ct---------c
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40176 41 -     88961 cttcc---------------------ttt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----ct---------c
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4875 41 -     39403 cttcc---------------------ttt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----ct---------c
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39829 41 +     87928 cttcc---------------------ttt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----ct---------c
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4873 41 -     60166 cttcc---------------------ttt--tt-tg--------------------------tgtattttagattgt-----------------------------ctctgc-ttatc----ct---------c
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11809 41 -     67232 cttcc---------------------ttt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----ct---------c
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39725 41 -     90634 cttcc---------------------ttt--tt-tg--------------------------tatattttagattgt-----------------------------ctctgc-ttatc----ct---------c
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41193 41 +     89403 cttcc---------------------ttt--tt-tg--------------------------tgtattttagattgt-----------------------------ctctgc-ttatc----ct---------c
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174145 42 - 189387572 ctTCC---------------------TTT--TC-TG-------------------------ATATATTTTAGATTGT-----------------------------CTCTGC-TTATC----TT---------C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189143 42 -   9816681 cttcc---------------------ttt--tc-tg-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24326 41 +     69807 CTTCC---------------------TT---TT-TA-------------------------ATAtattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41521 41 -     80239 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563133 42 -   2598838 CTCCC---------------------TTT--TT-CT-------------------------GTATGTTTCAGATTGT-----------------------------CTTTAC-TTATC----TT---------C
i Propithecus_coquerelli.NW_012148875.1                  I 2 C 0
s Propithecus_coronatus.k141_209299                            771 42 -      7103 ctccc---------------------ttt--tt-ct-------------------------gtatgtttcagattgt-----------------------------ctttac-ttatc----tt---------c
i Propithecus_coronatus.k141_209299                      I 2 C 0
s Propithecus_diadema.k141_153680                             1368 42 -     11706 ctccc---------------------ttt--tt-ct-------------------------gtatgtttcagattgt-----------------------------ctttac-ttatc----tt---------c
i Propithecus_diadema.k141_153680                        I 2 C 0
s Propithecus_edwardsi.k141_635656                            5103 42 -     30655 ctccc---------------------ttt--tt-ct-------------------------gtatgtttcagattgt-----------------------------ctttac-ttatc----tt---------c
i Propithecus_edwardsi.k141_635656                       I 2 C 0
s Propithecus_perrieri.k141_1496898                          31428 42 +     46564 ctccc---------------------ttt--tt-ct-------------------------gtatgtttcagattgt-----------------------------ctttac-ttatc----tt---------c
i Propithecus_perrieri.k141_1496898                      I 2 C 0
s Propithecus_tattersalli.k141_1127767                       91699 42 -     98465 ctccc---------------------ttt--tt-ct-------------------------gtatgtttcagattgt-----------------------------ctttac-ttatc----tt---------c
i Propithecus_tattersalli.k141_1127767                   I 2 C 0
s Propithecus_verreauxi.k141_1047036                          5338 42 +     35169 ctccc---------------------ttt--tt-ct-------------------------gtatgtttcagattgt-----------------------------ctttac-ttatc----tt---------c
i Propithecus_verreauxi.k141_1047036                     I 2 C 0
s Pteronotus_parnellii.KE847780.1                            48519 18 -     66298 ---------------------------CT--TA-TG-------------------------G--------------------------------------------GGGTCA-T----A---TT---------T
i Pteronotus_parnellii.KE847780.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1597 36 -     18639 -----------------------------------t-------------------------g---------------g-ggg-g--aatgg-at-ct-cagatcatcgttgatt-------att---------t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 7 C 0
s Pteropus_alecto.KB030862.1                               5837496 19 -  28871421 ---------------------------TTT-TC-TG-------------------------G--------------------------------------------ggagta-t-------att---------t
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Pteropus_vampyrus.KN525825.1                             3534057 19 -   4952924 ---------------------------TTT-TC-TG-------------------------G--------------------------------------------ggagta-t-------att---------t
i Pteropus_vampyrus.KN525825.1                           I 3 C 0
s Puma_concolor.QAVW01001104.1                            18095960 38 +  38429054 --------------------------------t-tt-------------------------g---------------gtgggacg-g-t---at-ct-caggttatttttgctt-------att---------t
i Puma_concolor.QAVW01001104.1                           I 8 C 0
s Pygathrix_cinerea.k141_1153803                             23717 41 +     91421 CTTCC---------------------TT---TT-TA-------------------------ATAtattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150210 41 -   7812017 CTTCC---------------------TT---TT-TA-------------------------ATAtattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4587 41 +     72585 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2910143 18 +   3329780 ---------------------------TTTTTT-TG-------------------------G--------------------------------------------CG--TA-T----A---TT---------T
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 C 0
s Rhinopithecus_bieti.k119_221883                            25547 41 +     27361 cttcc---------------------tt---ta-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118895 41 + 195417433 cttcc---------------------tt---ta-ta-------------------------atatattttatattgt-----------------------------ctcTGC-TTATC----TT---------C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233155 41 -   7961872 cttcc---------------------tt---ta-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71519 19 -    116970 ---------------------------tt-ttc-tg-------------------------g--------------------------------------------ggagta-t-------att---------t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 3 C 0
s Saguinus_bicolor.k141_1429097                                982 39 +     27962 --ttc---------------------ctt--tt-tc--------------------------tatattttagattct-----------------------------ccctgc-gtgtc----tt---------c
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                              998 29 +      6077 --------------------------------------------------------------tatattttagattgt-----------------------------ccctgc-gtatc----tt---------c
i Saguinus_geoffroyi.k141_3779887                        I 3 C 0
s Saguinus_imperator.k141_1898058                             1008 39 +      5971 --ttc---------------------ctt--tt-tg--------------------------tatattttagattgt-----------------------------ccctgc-gtatc----tt---------c
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1063 39 +      5932 --TTC---------------------CTT--TT-TG--------------------------TATATTTTAGATTGT-----------------------------CCCTGC-GTATC----TT---------C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1209 39 -      2099 --TTC---------------------CTT--TT-TG--------------------------TATATTTTAGATTGT-----------------------------CCCTGC-GTATC----TC---------C
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388241 38 - 209938924 --ttc---------------------cat--tt-g---------------------------gaaattttagattct-----------------------------ccctgc-gtgtc----tt---------c
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1010 39 +      5979 --TTC---------------------CTT--TT-TG--------------------------TATATTTTAGATTGT-----------------------------CCCTGC-GTATC----TT---------C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1397 29 -      4301 --------------------------------------------------------------tatattttagattgt-----------------------------ccctgc-gtatc----tt---------c
i Saguinus_oedipus.k141_1466288                          I 3 C 0
s Sapajus_apella.ctg103                                     235466 32 +   5703754 --------------------------------t-tg--------------------------tatattttagatcgt-----------------------------ctctgc-ttatc----tt---------c
i Sapajus_apella.ctg103                                  I 8 C 0
s Sapajus_macrocephalus.k141_796559                           5056 32 +     21866 --------------------------------t-tg--------------------------tatattttagatcgt-----------------------------ctctgc-ttatc----tt---------c
i Sapajus_macrocephalus.k141_796559                      I 8 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113184 45 +    313613 -ccac---------------------cct--tt-tgggag------ataaatttccgatcaa--------------------------------------------ctttgc-t----aatctt---------c
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 C 0
s Semnopithecus_entellus.k141_158471                         22034 41 +     27374 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25553 41 +     58920 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12049 41 -     45317 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19707 41 -     42441 CTTCC---------------------TT---TT-TA-------------------------ATAtattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22387 41 -     29113 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25456 41 -     48123 CTTCC---------------------TT---TT-TA-------------------------ATAtattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855872 26 -   1910179 -ccac---------------------tct--tt-tg-------------------------t--------------------------------------------ctttgc-t----aatctt---------c
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3602 37 -     97271 -----------------------------------t-------------------------g---------------g-ggg-g--aatgatat-ca-cagatcatctttgctt-------att---------t
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 11 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121630 39 +    196729 --------------------------------t-tt-------------------------g---------------g-tgg-gg-g-tggtat-ct-cagatgaattttgttt-------att---------t
i Suricata_suricatta.SurSur_flattened_line_6629          I 8 C 0
s Symphalangus_syndactylus.tarseq_199                       387615 42 +   1523678 cttcc---------------------ttt--tt-tg-------------------------atatattttagattgt-----------------------------ctctgc-ttatc----tt---------c
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_231636                 561 16 +      3470 -------------------------------aa-tg-------------------------g--------------------------------------------ggataa-t-------aat---------a
i Tadarida_brasiliensis.TadBra_scaffold_231636           C 0 I 110
s Tamandua_tetradactyla.TamTet_scaffold_3008565                206 23 -       237 -TTGC---------------------AAA--TT-TT-------------------------G--------------------------------------------CTTTTC-T------T-TT---------C
i Tamandua_tetradactyla.TamTet_scaffold_3008565          N 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188252 39 +    199430 ---cc---------------------ttt--tt-tt-------------------------g---------------g-g-ta--t-at--t-t-c---agatcatttttgctt-------atc---------a
i Tapirus_indicus.TapInd_scaffold_7432                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102203 39 -    539355 ---cc---------------------ttt--tt-ct-------------------------g---------------g-g-ta--t-at--t-t-c---agatcatttttactt-------atc---------a
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Theropithecus_gelada.CM009954.1                           349905 42 - 186847797 cttcc---------------------ttt--tt-ta-------------------------atatattttagattgT-----------------------------CTCTAC-TTATC----GT---------C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17282 23 -     31044 -ttgt---------------------aag--tt-tt-------------------------g--------------------------------------------cttttc-t-------ttt---------c
i Tolypeutes_matacus.TolMat_scaffold_31955               I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476333 18 -    610378 ---------------------------CT--TA-TG-------------------------G--------------------------------------------GGGTGG-T----A---TT---------T
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_1189070                        17600 41 +     26378 CTTCC---------------------TT---TT-TA-------------------------ATAtattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30282 41 -     78344 CTTCC---------------------TT---TT-TA-------------------------ATAtattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16921 41 +     25722 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25144 41 -     62838 CTTCC---------------------TT---TT-TA-------------------------ATAtattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25261 41 +     46913 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----gt---------c
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6069 41 -     28527 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27083 41 -     64340 CTTCC---------------------TT---TT-TA-------------------------ATAtattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25120 41 -     63452 CTTCC---------------------TT---TT-TA-------------------------ATAtattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6563 41 +     22490 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                            0 33 -      6147 --------------------------------T-TA-------------------------ATAtattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Trachypithecus_melamera.k141_591572                    N 0 C 0
s Trachypithecus_obscurus.k141_848057                         6987 41 -     13050 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252224 41 -   6242583 CTTCC---------------------TT---TT-TA-------------------------ATAtattttatattgt-----------------------------ctctgc-ttatc----tt---------c
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57955 41 +     59866 cttcc---------------------tt---tt-ta-------------------------atatattttatattgt-----------------------------ctctgc-ttatc----gt---------c
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830189 41 -   4065304 -cctc---------------------cat--tt-tt-------------------------gtatatttcagatttt-----------------------------tgttgc-ttatc----tt---------t
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4741 41 -     70247 -CCTC---------------------CAT--TT-TT-------------------------GTATATTTCAGATTTT-----------------------------TGTTGC-TTATC----TT---------T
i Tupaia_tana.TupTan_flattened_line_394                  I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104413 42 -    105689 -CTAC---------------------CCT--TT-TT------AGGAATGTATTTCAGATCAG--------------------------------------------CTTTGC-T----A---TT---------T
i Uropsilus_gracilis.UroGra_scaffold_7153                I 3 C 0
s Ursus_maritimus.KK499267.1                                178484 45 +   5085361 -ctct---------------------ctc--ct-tt-------------------------g---------------g-g--acgtggt---at-ct-cagatcatctttgctt-------att---------t
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_787544                                  22204 42 -     30710 ctccc---------------------ttt--tt-ct-------------------------gtatgtttcagattgt-----------------------------ctttgc-ttatc----tt---------c
i Varecia_rubra.k141_787544                              I 2 C 0
s Varecia_variegata.k141_289850                              21111 42 -    147434 ctccc---------------------ttt--tt-ct-------------------------gtatgtttcagattgt-----------------------------ctttgc-ttatc----tt---------c
i Varecia_variegata.k141_289850                          I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101915 45 -    112863 -cccc---------------------tct--gt-tt-------------------------g---------------g-gggaggtggt---at-ct-ca--tcatcttggctt-------att---------t
i Vulpes_lagopus.VulLag_flattened_line_12041             I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25751 50 -     86975 -cctc---------------------ttt--gt-tt-------------------------g---------------g-gggcggtggtggtat-ct-cagatcatttttgctt-------att---------t
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tarsius_wallacei.k141_226975                                4353  0 +     20590 C
e Tarsius_lariang.k141_1780720                                4314  0 +      6850 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               378852 458 +   4330536 I
e Myotis_davidii.KB100139.1                                4383241 234 +   6019432 I
e Myotis_brandtii.KE162005.1                               9788622 460 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          34604 32 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12574705 34 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Cephalopachus_bancanus.k141_72622                            791  0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Carlito_syrichta.NW_007259797.1                           267622  0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1327  5 +     36723 TA-----------TA--G
s Acinonyx_jubatus.LLWD01001279.1                           809736  5 +   1699592 tc-----------tc--t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412005  5 +  29979442 tc-----------tg--t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44616  5 +     53615 ta-----------ga--g
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40438  5 +     44087 ta-----------ga--g
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13142  5 -     21945 ta-----------ga--g
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14820  5 +     32033 ta-----------ga--g
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69374  5 -     84148 ta-----------ta--g
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41600  5 -     78289 ta-----------ta--g
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41048  5 +     55831 ta-----------ta--g
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39486  5 -     64179 ta-----------ta--g
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21132  5 -     24835 ta-----------ta--g
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38115  5 +     45454 ta-----------ta--g
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43814  5 +     70886 ta-----------ta--g
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5938  5 +     30854 ta-----------ta--g
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30077  5 +     42133 ta-----------ta--g
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173321  7 -    412891 ta-----------gattg
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 472
s Aotus_azarae.k141_118258                                   47890  5 -     65372 ta-----------ta--g
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41635  5 +     43593 ta-----------ta--g
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669648  5 +   5030052 TA-----------TA--G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21290  5 -     23494 ta-----------ta--g
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6426  5 +      8415 ta-----------ta--g
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16494  5 -     45910 tg-----------ta--g
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  1627  7 -     15198 TA-----------GATtg
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 470
s Ateles_geoffroyi_b.tarseq_1536                               271876  5 +  21539123 ca-----------ta--g
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8044  5 +     48076 ca-----------ta--g
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3180  5 -     28759 ca-----------ta--g
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30733  5 +     44353 ca-----------ta--g
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46105  5 -     71267 ca-----------ta--a
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20164  5 -     33135 ca-----------ta--g
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3300  5 +     11645 tg-----------ta--g
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3301  5 -     19611 tg-----------ta--g
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5068  5 +     28062 ta-----------ta--g
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40362  5 -     91139 ta-----------ta--g
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17888  5 +     95584 ta-----------ta--g
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17801  5 +    119600 ta-----------ta--g
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7292  5 +     18648 tg-----------ta--g
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6976  5 -     13885 ta-----------ca--g
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15653  5 +     17162 tg-----------ta--g
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450608  5 + 189096842 TG-----------TA--G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16901  5 -     18408 tg-----------ta--g
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502308  5 +  60362399 tc-----------tg--t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5938  5 -     23171 tc-----------tg--t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219299  5 +   9314153 tc-----------tg--t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41612424  5 +  59632846 tc-----------tg--t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45103994  5 -  63665305 tc-----------tg--t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               1713  7 +      5315 ta-----------gattg
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 455
s Cebuella_niveiventris.k141_592277                           2187  5 -     12580 tg-----------ta--g
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40073  5 +     53515 tg-----------ta--g
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368275  5 -  26074798 ta-----------ta--g
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5164  5 -     34880 ta-----------ta--g
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64259  5 -     89041 ta-----------ta--g
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cercocebus_atys.KQ010504.1                                137777  5 -   4669795 TA-----------GA--G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41517  5 +     47900 ta-----------ga--g
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41350  5 -     44860 ta-----------ga--g
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41333  5 -    148725 ta-----------ga--g
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24396  5 -     40656 ta-----------ga--g
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4332  5 +     20796 ta-----------ga--g
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8588  5 -     17524 ta-----------ga--g
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24276  5 -     34525 ta-----------ga--g
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8986  5 -     25376 ta-----------ga--g
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361552  5 -  39242232 ta-----------ga--g
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267296  5 +  21565898 ta-----------ga--g
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28752  5 -     45857 ta-----------ga--g
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24541  5 -     32606 ta-----------ga--g
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          727  5 +      8499 ta-----------ga--g
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22245  5 +     70610 ta-----------ga--g
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19105  5 +     36323 ta-----------ga--g
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10303  5 -     19938 ca-----------ta--g
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 20
s Cheirogaleus_major.k141_666340                             27727  5 -     33796 tg-----------ta--g
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1914  5 -     15404 tg-----------ta--g
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6162  5 -     32913 ta-----------ta--g
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16575  5 -     40346 ta-----------ta--g
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16839  5 +    216457 ta-----------ta--g
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16623  5 +     39636 ta-----------ta--g
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1023  5 +      5346 ca-----------ta--g
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39708  5 -    112038 ta-----------ta--g
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5280  5 +     34062 ta-----------ta--g
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340001  5 +  18827391 ta-----------ga--g
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6612  5 -     44032 ta-----------ga--g
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301327  5 - 135778131 TA-----------GA--G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405892  5 -   2368649 TA-----------TA--G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375055  5 - 200372422 ta-----------ta--g
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5779  5 -      6605 ta-----------ta--g
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804475  5 +  53390261 TT-----------TG--G
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005          9891  7 +     10921 CA-----------GATtg
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 I 473
s Cryptoprocta_ferox.CryFer_flattened_line_16129               974  5 +     87169 cc-----------ta--t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2107636  5 -   2246927 CA-----------TA--G
i Dasypus_novemcinctus.JH564415.1                        C 0 I 18
s Daubentonia_madagascariensis.ctg71                        289742  5 +  12879189 tg-----------ta--g
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11861357  7 -  20541912 TA-----------Gattg
i Desmodus_rotundus.KZ672289.1                           C 0 I 469
s Echinops_telfairi.JH980293.1                            62850740 10 - 111700974 taacatt------ta--g
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               2932  7 +     19438 ta-----------aattg
i Eidolon_helvum.AWHC01266696.1                          C 0 I 468
s Elephantulus_edwardii.JH947257.1                         9104827  1 -  10337057 -----------------g
i Elephantulus_edwardii.JH947257.1                       I 2 C 0
s Enhydra_lutris.KZ291758.1                               24913042  5 +  41312741 tc-----------tg--t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12574739  1 +  14770903 -----------------T
i Eptesicus_fuscus.JH977646.1                            I 34 I 496
s Equus_asinus.JREZ01000139.1                              3038519  5 -   4378816 tc-----------tg--t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21372453  5 +  39960074 tc-----------ta--t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409239  5 -    498745 tc-----------ta--t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               259559  5 +  21539334 ta-----------ga--g
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243401  5 - 206538554 tc-----------tc--t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185113183  5 - 205367284 tc-----------tc--t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24531  5 -     30238 tc-----------tc--t
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     120559  5 -    137831 tg-----------cc--a
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4100  5 +     22493 tg-----------cc--a
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17575  5 +     32986 TA-----------CA--G
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16154  5 +     18121 tg-----------ta--g
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1690  5 -      8343 tg-----------ta--g
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251180  5 - 186649187 ta-----------ta--g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27508  5 -    327341 cc-----------tg--t
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1546799  7 -   1711038 CT-----------Gattg
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 496
s Hipposideros_galeritus.HipGal_scaffold_23202               46119  7 +     49977 CT-----------GATtg
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 493
s Hoolock_leuconedys.ctg274                                    139074  5 -    630532 ta-----------ta--g
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65966  5 +     83186 tc-----------tg--t
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               2108  5 +     12352 ta-----------ta--g
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9291  5 +     55766 ta-----------ta--g
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048629  5 + 191637585 ta-----------ta--g
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797961  5 +  11177569 ta-----------ta--g
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     794  5 -      1527 tg-----------ta--g
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40423  5 +    110728 ta-----------ta--g
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1103  5 -     13097 CA-----------CA--G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1054  5 +      5940 CA-----------CA--G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         685  5 -      5717 ca-----------ta--g
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7324  5 -     11567 ta-----------ta--g
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8705  5 -     12945 ta-----------ta--g
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6087  5 +     29618 tg-----------ta--g
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6084  5 +     31569 tg-----------ta--g
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6096  5 +     24756 tg-----------ta--g
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6088  5 +     16388 tg-----------ta--g
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810398  5 -   3914936 tc-----------tg--t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               329733  5 -   1826925 ta-----------ga--g
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            3052  5 +     19643 TG-----------TA--G
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036711  5 -   6120653 tg-----------ta--g
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611579  5 +  59628241 tc-----------tg--t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42015  5 -     61512 ta-----------ga--g
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369643  5 -  60120075 ta-----------ga--g
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21963  5 +     30207 ta-----------ga--g
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19066  5 -     24934 ta-----------ga--g
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21849  5 +     30527 ta-----------ga--g
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33039  5 -     50087 ta-----------ga--g
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42777  5 +     51645 ta-----------ga--g
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411351  5 - 187317192 TA-----------GA--G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396234  5 +  25927173 TA-----------GA--G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45365  5 -     62418 ta-----------ga--g
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22053  5 +     24253 ta-----------ga--g
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41810  5 +     59329 ta-----------ga--g
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267642  5 +    668171 ta-----------ga--g
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18988  5 +     21031 ta-----------ga--g
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32721  5 +     33478 ta-----------ga--g
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                219882  7 -    270270 TA-----------AATtg
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 479
s Mandrillus_leucophaeus.scaffold280                        319118  5 +  24302211 ta-----------ga--g
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353950  5 -    752769 ta-----------ga--g
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670614  5 -    737560 tc-----------ta--g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217906  5 +    317179 tc-----------ta--g
i Manis_pentadactyla.KN006162.1                          I 36 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       147060  7 +    207569 ca-----------gattg
i Megaderma_lyra.MegLyr_scaffold_4542                    I 11 I 482
s Mellivora_capensis.MelCap_flattened_line_19308             22911  5 -     74585 tc-----------tg--t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mico_argentatus.k141_582562                                 7075  5 +     17804 tg-----------ta--g
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7848  5 -     12984 tg-----------ta--g
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15810  5 -     26561 tg-----------ta--g
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981696  5 +  93316391 TG-----------TA--G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41052 16 +    145209 taacattaatattga--g
i Microgale_talazaci.MicTal_scaffold_6613                I 16 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181291  7 +    200668 TA-----------GATTG
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 477
s Miniopterus_natalensis.LDJU01000308.1                     494604  7 -   1897963 ta-----------tattt
i Miniopterus_natalensis.LDJU01000308.1                  I 106 I 489
s Miniopterus_schreibersii.MinSch_scaffold_3531             134039  7 +    183988 TA-----------TATTt
i Miniopterus_schreibersii.MinSch_scaffold_3531          I 106 I 489
s Miopithecus_ogouensis.k141_1534655                         19110  5 -     27822 ta-----------ga--g
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5407  5 +     27589 tc-----------tg--t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     49554  5 -     62432 tg-----------ta--g
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175476  7 +    366855 TA-----------AATtg
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 474
s Mungos_mungo.MunMun_flattened_line_18455                   15262  5 -     63510 cc-----------tg--t
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          34636  1 +     47283 -----------------T
i Murina_feae.MurFea_scaffold_17764                      I 32 I 499
s Mustela_putorius.JH418006.1                             14351850  5 +  14710649 tc-----------tg--t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9789082  1 +  10118263 -----------------T
i Myotis_brandtii.KE162005.1                             I 460 I 498
s Myotis_davidii.KB100139.1                                4383475  1 +   6019432 -----------------t
i Myotis_davidii.KB100139.1                              I 234 I 501
s Myotis_lucifugus.GL429869.1                               379310  1 +   4330536 -----------------t
i Myotis_lucifugus.GL429869.1                            I 458 I 494
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117073  5 +    130748 ca-----------ta--g
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 16
s Nasalis_larvatus.k141_1350636                              25426  5 +     34575 ta-----------ta--g
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465793  5 -  31847680 tc-----------tg--t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   124142  7 -    149072 TA-----------GATTG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 470
s Nomascus_annamensis.k141_1771965                           50370  5 -    132029 ta-----------ta--g
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6466  5 -     16345 ta-----------ta--g
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12350  5 +     22201 ta-----------ta--g
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410686  5 -  22158432 ta-----------ta--g
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22749  5 -     54323 ta-----------ta--g
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195194  5 +   9404916 tc-----------tg--t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93631831  5 + 196305487 tg-----------ta--g
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1220  5 +      2758 tg-----------ta--g
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560085  5 - 199412804 tg-----------ta--g
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448580  5 +   2017862 tc-----------tg--t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              10492  5 -     14239 ta-----------ta--g
i Orycteropus_afer.OryAfe_flattened_line_171931          I 4 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36242  5 +    559221 tc-----------tg--t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        35690  5 -     51505 tg-----------cc--a
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             348705  5 +   1103335 TG-----------CC--A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468569  5 - 189151597 TA-----------TA--G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21121  5 -    230217 tc-----------tc--t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18458447  5 -  18783137 tc-----------tc--t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3969172  5 +   8748460 tc-----------tc--t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   239961  5 - 183742232 TA-----------GA--G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6427  5 +     21308 ta-----------ga--g
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287464  5 -  20919399 ta-----------ga--g
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19080  5 -     27687 ta-----------ga--g
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12216  5 +     16796 ta-----------ga--g
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19026  5 -     23640 ta-----------ga--g
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12035  5 +     78924 tc-----------tg--t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21938  5 +     31479 tg-----------ta--g
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14308  5 -     24908 tg-----------ta--g
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5883  5 +      7560 ta-----------ta--g
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61590  5 -     63152 ta-----------ta--g
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44189  5 +     45295 ta-----------ta--g
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1868  5 +      5735 TA-----------TA--G
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62058  5 +    207309 ta-----------ca--g
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3178  5 -     25401 ta-----------ca--g
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28893  5 +     58159 ta-----------ca--g
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29169  5 +     63561 ta-----------ca--g
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28932  5 +     51148 ta-----------ca--g
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553925  5 -   4542175 ta-----------ca--g
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28916  5 +     51125 ta-----------ca--g
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5336  5 +     39866 ta-----------ta--g
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           423  5 -      9282 ta-----------ta--g
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39824  5 -     87950 ta-----------ta--g
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40217  5 -     88961 ta-----------ta--g
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4916  5 -     39403 ta-----------ta--g
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39870  5 +     87928 ta-----------ta--g
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4914  5 -     60166 ta-----------ta--g
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11850  5 -     67232 ta-----------ta--g
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39766  5 -     90634 ta-----------ta--a
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41234  5 +     89403 ta-----------ta--g
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174187  5 - 189387572 TA-----------TA--G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189185  5 -   9816681 ta-----------ta--g
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24367  5 +     69807 ta-----------ta--g
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41562  5 -     80239 ta-----------ta--g
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563175  5 -   2598838 TG-----------Ta--g
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            813  5 -      7103 tg-----------ta--g
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1410  5 -     11706 tg-----------ta--g
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5145  5 -     30655 ta-----------ta--g
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31470  5 +     46564 tg-----------ta--g
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91741  5 -     98465 tg-----------ta--g
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5380  5 +     35169 tg-----------ta--g
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            48537  7 -     66298 GA-----------GGTTG
i Pteronotus_parnellii.KE847780.1                        C 0 I 481
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1633  5 -     18639 tc-----------tg--t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5837515  7 -  28871421 ta-----------aattg
i Pteropus_alecto.KB030862.1                             C 0 I 477
s Pteropus_vampyrus.KN525825.1                             3534076  7 -   4952924 ta-----------aattg
i Pteropus_vampyrus.KN525825.1                           C 0 I 477
s Puma_concolor.QAVW01001104.1                            18095998  5 +  38429054 tc-----------tc--t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23758  5 +     91421 ta-----------ta--g
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150251  5 -   7812017 ta-----------ta--g
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4628  5 +     72585 ta-----------ta--g
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2910161  7 +   3329780 CT-----------GATtg
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 465
s Rhinopithecus_bieti.k119_221883                            25588  5 +     27361 ta-----------ta--g
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118936  5 + 195417433 TA-----------TA--G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233196  5 -   7961872 ta-----------ta--g
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 71538  7 -    116970 ta-----------aattg
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 463
s Saguinus_bicolor.k141_1429097                               1021  5 +     27962 ca-----------ta--g
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1027  5 +      6077 ca-----------ta--g
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1047  5 +      5971 ca-----------ta--g
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1102  5 +      5932 CA-----------TA--G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1248  5 -      2099 CA-----------TA--G
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388279  5 - 209938924 ca-----------ta--g
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1049  5 +      5979 CA-----------TA--G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1426  5 -      4301 ca-----------ta--g
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235498  5 +   5703754 ta-----------ta--g
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5088  5 +     21866 ta-----------ta--g
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113229  5 +    313613 tg-----------ta--g
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22075  5 +     27374 ta-----------ta--g
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25594  5 +     58920 ta-----------ta--g
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12090  5 -     45317 ta-----------ta--g
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19748  5 -     42441 ta-----------ta--g
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22428  5 -     29113 ta-----------ta--g
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25497  5 -     48123 ta-----------ta--g
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855898  5 -   1910179 ta-----------ta--g
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3639  5 -     97271 tc-----------tg--t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121669  5 +    196729 cc-----------tg--t
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387657  5 +   1523678 ta-----------ta--g
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_231636                 687  7 +      3470 TA-----------TATTT
i Tadarida_brasiliensis.TadBra_scaffold_231636           I 110 I 496
s Tamandua_tetradactyla.TamTet_scaffold_3008565                229  5 -       237 CA-----------TA--G
i Tamandua_tetradactyla.TamTet_scaffold_3008565          C 0 N 0
s Tapirus_indicus.TapInd_scaffold_7432                      188291  5 +    199430 t--c---------ta--t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102242  4 -    539355 t------------ta--t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                           349947  5 - 186847797 TA-----------GA--G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17305  5 -     31044 ca-----------ta--g
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 21
s Tonatia_saurophila.TonSau_scaffold_294                    476351  7 -    610378 TA-----------GATTG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 477
s Trachypithecus_auratus.k141_1189070                        17641  5 +     26378 ta-----------ta--g
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30323  5 -     78344 ta-----------ta--g
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16962  5 +     25722 ta-----------ta--g
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25185  5 -     62838 ta-----------ta--g
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25302  5 +     46913 ta-----------ta--g
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6110  5 -     28527 ta-----------ta--g
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27124  5 -     64340 ta-----------tg--g
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25161  5 -     63452 ta-----------tg--g
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6604  5 +     22490 ta-----------ta--g
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                           33  5 -      6147 ta-----------ta--g
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7028  5 -     13050 ta-----------ta--g
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252265  5 -   6242583 ta-----------ta--g
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       57996  5 +     59866 ta-----------ta--g
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830230  5 -   4065304 ta-----------ta--a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4782  5 -     70247 TA-----------TA--A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104455  5 -    105689 TA-----------TA--G
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178529  5 +   5085361 tc-----------tg--t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22246  5 -     30710 tg-----------ta--g
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21153  5 -    147434 tg-----------ta--g
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101960  5 -    112863 tc-----------tg--t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25801  5 -     86975 tc-----------tg--t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tarsius_wallacei.k141_226975                                4353  0 +     20590 C
e Tarsius_lariang.k141_1780720                                4314  0 +      6850 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  136322 13 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  661529 13 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16078 13 +     27315 I
e Cephalopachus_bancanus.k141_72622                            791  0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Carlito_syrichta.NW_007259797.1                           267622  0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1332 30 +     36723 C----CACTGT-TTTCCCTCTA--------------------ATAA-T--T-TTT-----------------AGA-T
s Acinonyx_jubatus.LLWD01001279.1                           809741 31 +   1699592 agccac---------------t--------------------gtt--t--t-c--tctct-aa-tcccttt-aaa-a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412010 29 +  29979442 agtcat---------------c--------------------att--t--t-c--tct---aa-tcccttt-taa-a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   44621 29 +     53615 c----cattat-ttt-cctgta--------------------atac-t--t-tgt-----------------agg-t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40443 30 +     44087 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13147 30 -     21945 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14825 30 +     32033 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69379 30 -     84148 c----cattgt-attccctcta--------------------atat-t--t-ttt-----------------aga-t
i Alouatta_belzebul.k141_1011583                         C 0 I 3
s Alouatta_caraya.k141_1109140                               41605 30 -     78289 c----cattgt-attccctcta--------------------atat-t--t-ttt-----------------aga-t
i Alouatta_caraya.k141_1109140                           C 0 I 3
s Alouatta_discolor.k141_2561099                             41053 30 +     55831 c----cattgt-attccctcta--------------------atat-t--t-ttt-----------------aga-t
i Alouatta_discolor.k141_2561099                         C 0 I 3
s Alouatta_juara.k141_1687208                                39491 30 -     64179 c----cattgt-attccctcta--------------------atat-t--t-ttt-----------------aga-t
i Alouatta_juara.k141_1687208                            C 0 I 3
s Alouatta_macconnelli.k141_361275                           21137 30 -     24835 c----cattgt-attccctcta--------------------atat-t--t-ttt-----------------aga-t
i Alouatta_macconnelli.k141_361275                       C 0 I 3
s Alouatta_nigerrima.k141_376068                             38120 30 +     45454 c----cattgt-attccctcta--------------------atat-t--t-ttt-----------------aga-t
i Alouatta_nigerrima.k141_376068                         C 0 I 3
s Alouatta_palliata.k141_638677                              43819 30 +     70886 c----cattgt-attccctcta--------------------atat-t--t-ttt-----------------aga-t
i Alouatta_palliata.k141_638677                          C 0 I 3
s Alouatta_puruensis.k141_251022                              5943 30 +     30854 c----cattgt-attccctcta--------------------atat-t--t-ttt-----------------aga-t
i Alouatta_puruensis.k141_251022                         C 0 I 3
s Alouatta_seniculus.k141_928287                             30082 30 +     42133 c----cattgt-attccctcta--------------------atat-t--t-ttt-----------------aga-t
i Alouatta_seniculus.k141_928287                         C 0 I 3
s Anoura_caudifer.AnoCau_scaffold_1412                      173800 16 -    412891 a----t---------------c--------------------ctt--t--t-c--tct--------------ata-a
i Anoura_caudifer.AnoCau_scaffold_1412                   I 472 I 125
s Aotus_azarae.k141_118258                                   47895 30 -     65372 c----cattgt-attccctcta--------------------atat-a--t-tta-----------------aga-t
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41640 30 +     43593 c----cattgt-attccctcta--------------------atat-c--t-ttt-----------------agg-t
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669653 30 +   5030052 C----CATTGT-ATTCCCTCTA--------------------ATAT-C--T-TTT-----------------AGG-T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21295 30 -     23494 c----cattgt-attccctcta--------------------atat-c--t-ttt-----------------aga-t
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6431 30 +      8415 c----cattgt-attccctcta--------------------atat-c--t-ttt-----------------aga-t
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16499 24 -     45910 c----tattgt-tttctcttga--------------------atcc-t--t-t------------------------
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2104 20 -     15198 A----T---------------CT--T---T-----------GCTT--T--T-C---------------TCT-ATA-A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 470 I 106
s Ateles_geoffroyi_b.tarseq_1536                               271881 29 +  21539123 c----cattgt-attccctcta--------------------atat-t--t-ttt-----------------aga--
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8049 29 +     48076 c----cattgt-attccctcta--------------------atat-t--t-ttt-----------------aga--
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3185 29 -     28759 c----cattgt-attctctcta--------------------atat-t--t-ttt-----------------aga--
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30738 29 +     44353 c----cattgt-attccctcta--------------------atat-t--t-ttt-----------------aga--
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46110 29 -     71267 c----cattgt-attccctcta--------------------atat-t--t-ttt-----------------aga--
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20169 29 -     33135 c----cattgt-attccctcta--------------------atat-t--t-ttt-----------------aga--
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3305 29 +     11645 c----tattgt-tttttctcta--------------------atcc-t--t-t--t----------------ata-t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3306 29 -     19611 c----tattgt-tttttctcta--------------------atcc-t--t-t--t----------------ata-t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5073 30 +     28062 c----cgttgt-gttccctctg--------------------atac-t--t-ttt-----------------aga-t
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40367 30 -     91139 c----cgttgt-gttccctctg--------------------atac-t--t-ttt-----------------aga-t
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17893 30 +     95584 c----cgttgt-gttccctctg--------------------atac-t--t-ttt-----------------aga-t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17806 30 +    119600 c----cgttgt-gttccctctg--------------------atac-t--t-ttt-----------------aga-t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7297 30 +     18648 c----cattgt-attcccgcta--------------------atat-t--t-ttt-----------------aga-t
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              6981 30 -     13885 c----cattgt-attccctcta--------------------atat-t--t-ttt-----------------aga-t
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15658 30 +     17162 c----cattgt-attcccgcta--------------------atat-t--t-ttt-----------------aga-t
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450613 30 + 189096842 C----CATTGT-ATTCTCGCTA--------------------ATAT-T--T-TTT-----------------AGA-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16906 30 -     18408 c----cattgt-attctcgcta--------------------atat-t--t-ttt-----------------aga-t
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502313 31 +  60362399 agtcat---------------t--------------------att--t--t-c--tctct-aa-tcccttt-aaa-a
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5943 31 -     23171 agtcat---------------t--------------------att--t--t-c--tctct-aa-tcccttt-aaa-a
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                          219304 31 +   9314153 agtcat---------------t--------------------att--t--t-c--tctct-aa-tcccttt-aaa-a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            41612429 31 +  59632846 agtcat---------------t--------------------att--t--t-c--tctct-aa-tcccttt-aaa-a
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            45103999 31 -  63665305 agtcat---------------t--------------------att--t--t-c--tctct-aa-tcccttt-aaa-a
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_170178               2175 20 +      5315 a----t---------------c-----------tct-----gctt--t--t-c--tct--------------aca-a
i Carollia_perspicillata.CarPer_scaffold_170178          I 455 I 113
s Cebuella_niveiventris.k141_592277                           2192 30 -     12580 c----cattgt-attcccgcta--------------------atat-t--t-ttt-----------------aga-t
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40078 30 +     53515 c----cattgt-attcccgcta--------------------atat-t--t-ttt-----------------aga-t
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368280 30 -  26074798 c----cattgt-gttccctcta--------------------atat-t--t-ttt-----------------aga-t
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5169 30 -     34880 c----cattgt-gttccctcta--------------------atat-t--t-ttt-----------------aga-t
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64264 30 -     89041 c----cattgt-gttccctcta--------------------atat-t--t-ttt-----------------aga-t
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489258 31 -  27778364 agccat---------------c--------------------att--t--t-c--tctct-aa-tcctttt-aaa-a
i Ceratotherium_simum.JH767749.1                         I 13 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16091 31 +     27315 agccat---------------c--------------------att--t--t-c--tctct-aa-tcctttt-aaa-a
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 13 I 1
s Cercocebus_atys.KQ010504.1                                137782 30 -   4669795 C----CATTGT-TTTCCCTCTA--------------------ATAC-T--T-TTT-----------------aga-t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41522 30 +     47900 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41355 30 -     44860 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41338 30 -    148725 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24401 30 -     40656 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4337 30 +     20796 c----tgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8593 30 -     17524 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24281 30 -     34525 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            8991 30 -     25376 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361557 30 -  39242232 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267301 30 +  21565898 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28757 30 -     45857 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24546 30 -     32606 c----cattat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          732 30 +      8499 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22250 30 +     70610 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19110 30 +     36323 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10328  4 -     19938 ------------------------------------------------------------------------ata-t
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 20 C 0
s Cheirogaleus_major.k141_666340                             27732 29 -     33796 c----tattgt-tttctctcta--------------------atcc-t--t-t--t----------------ata-t
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1919 29 -     15404 c----tattgt-tttctctcta--------------------atcc-t--t-t--t----------------ata-t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6167 30 -     32913 c----cattgc-atttcctcta--------------------atat-t--t-ttt-----------------aaa-t
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16580 30 -     40346 c----cattgc-atttcctcta--------------------atat-t--t-ttt-----------------aaa-t
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16844 30 +    216457 c----cattgc-atttcctcta--------------------atat-t--t-ttt-----------------aaa-t
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16628 30 +     39636 c----cattgc-atttcctcta--------------------atat-t--t-ttt-----------------aaa-t
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1028 30 +      5346 c----cattgt-atggcctctc--------------------atac-t--t-tct-----------------aga-t
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39713 30 -    112038 c----tgttgt-attccctctg--------------------atac-t--t-ttt-----------------aga-t
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5285 30 +     34062 c----tgttgt-attccctctg--------------------atac-t--t-ttt-----------------aga-t
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340006 30 +  18827391 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6617 30 -     44032 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301332 30 - 135778131 C----CGTTAT-TTTCCCTGTA--------------------Atac-t--t-ttt-----------------aga-t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405897 30 -   2368649 C----CATTGT-TTTCCCTCTA--------------------ATAC-T--T-TTT-----------------aga-t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375060 30 - 200372422 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5784 30 -      6605 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804480 40 +  53390261 C----T---------------ATCATCCATTTctctaatcctttt--tttt-t--t-----a--t---tt--taa-a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005         10371 16 +     10921 A----T---------------C--------------------ATT--T--T-T---------------TCT-CTA-A
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 473 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129               979 31 +     87169 agcgac---------------c--------------------att--g--t-c--tctct-aa-tcccttt-aaa-a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Dasypus_novemcinctus.JH564415.1                          2107659  4 -   2246927 ------------------------------------------------------------------------CTA-T
i Dasypus_novemcinctus.JH564415.1                        I 18 C 0
s Daubentonia_madagascariensis.ctg71                        289747 29 +  12879189 c----tgttgt-tttctctcta--------------------atcc-t--t-t--t----------------ata-t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11861833 16 -  20541912 a----t---------------c--------------------gtt--c--t-c--tct--------------ata-a
i Desmodus_rotundus.KZ672289.1                           I 469 I 125
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661542 31 -   1390856 agccat---------------c--------------------att--t--t-c--tctct-aa-tcctttt-aaa-a
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 13 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                  136335 31 -    198055 agccat---------------c--------------------att--t--t-c--tctct-aa-tcctttt-aaa-a
i Diceros_bicornis.DicBicMic_scaffold_5955               I 13 I 1
s Echinops_telfairi.JH980293.1                            62850750 23 - 111700974 a----g---------------a---------------------tt--t--g-t---ct-tcaa-ac--ttA-CTA-A
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               3407 17 +     19438 a----t---------------c--------------------att-tt--t-g--tct--------------cta-a
i Eidolon_helvum.AWHC01266696.1                          I 468 I 1
s Elephantulus_edwardii.JH947257.1                         9104828 20 -  10337057 g----a---------------a---------------------tc--t--t-t--t-tc---c-tc--t---acaaa
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913047 31 +  41312741 agtcat---------------c--------------------att--t--t-t--cct-t-cagtctcttt-aga-a
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                             12575236 15 +  14770903 a----c---------------c--------------------att--t--t-c--tct--------------ata--
i Eptesicus_fuscus.JH977646.1                            I 496 I 710
s Equus_asinus.JREZ01000139.1                              3038524 31 -   4378816 agtcat---------------c--------------------att--t--t-c--tctct-ca--ctcttttaaa-a
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               21372458 31 +  39960074 agtcat---------------c--------------------att--t--t-c--tctct-ca--ctcttttaaa-a
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                              409244 31 -    498745 agtcat---------------c--------------------att--t--t-c--tctct-ca--ctcttttaaa-a
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erythrocebus_patas.Contig38                               259564 30 +  21539334 c----cgttat-tttccctgta--------------------atac-t--t-ttt-----------------aga-t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243406 31 - 206538554 agccac---------------t--------------------gtt--t--t-c--tctct-aa-tcccttt-aaa-a
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                          185113188 31 - 205367284 agccac---------------t--------------------gtt--t--t-c--tctct-aa-tcccttt-aaa-a
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_31944                 24536 31 -     30238 agccac---------------t--------------------gtt--t--t-c--tctct-aa-tcccttt-aaa-a
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 1
s Galago_moholi.ctg3793                                     120564 28 -    137831 c----tattgt-tttctcttaa--------------------gccc-t--t-t-------------------aaa-t
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4105 28 +     22493 c----tattgt-tttctcttaa--------------------gccc-t--t-t-------------------aaa-t
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17580 28 +     32986 C----TATTGT-TTTCTCTTAA--------------------GCCC-T--T-T-------------------AAA-T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16159 29 +     18121 c----cgttgt-tttctttcca--------------------attc-t--t-t--t----------------aga-c
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1695 30 -      8343 c----cactgt-tttccttcta--------------------ataa-t--t-ttt-----------------aga-t
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251185 30 - 186649187 c----cactgt-tttccctcta--------------------ataa-t--t-ttt-----------------aga-t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27513 31 -    327341 agcctc---------------c--------------------att--t--t-c--tctct-ca-taccttt-aag-a
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hipposideros_armiger.JXIK01000431.1                      1547302 16 -   1711038 a----t---------------c--------------------att--t--t-c--tct--------------ata-a
i Hipposideros_armiger.JXIK01000431.1                    I 496 I 1
s Hipposideros_galeritus.HipGal_scaffold_23202               46619 16 +     49977 a----t---------------c--------------------att--t--t-c--tct--------------ata-a
i Hipposideros_galeritus.HipGal_scaffold_23202           I 493 I 1
s Hoolock_leuconedys.ctg274                                    139079 30 -    630532 c----cactgt-tttccctcta--------------------atgc-t--t-ttt-----------------aga-t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  65971 31 +     83186 agccac---------------c--------------------gtt--t--t-c--tctcg-aa-tcccttt-aaa-a
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 1
s Hylobates_agilis.k141_1155965                               2113 30 +     12352 c----cactgt-tttccctcta--------------------atgc-t--t-ttt-----------------aga-t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9296 30 +     55766 c----cactgt-tttccctcta--------------------atgc-t--t-ttt-----------------aga-t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048634 30 + 191637585 c----cactgt-tttccctcta--------------------atgc-t--t-ttt-----------------aga-t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797966 30 +  11177569 c----cactgt-tttccctcta--------------------atgc-t--t-ttt-----------------aga-t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     799 29 -      1527 c----tgttgt-tttttctcta--------------------atcc-t--t-t--t----------------ata-t
i Indri_indri.k141_4600452                               C 0 I 12
s Lagothrix_lagothricha.k141_246028                          40428 30 +    110728 c----cattgt-attccctcta--------------------atat-t--g-ttt-----------------aga-t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1108 30 -     13097 C----CATTGT-ATGCCCTCTC--------------------ATAC-T--T-TTG-----------------AGA-T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1059 30 +      5940 C----CATTGT-ATGCCCTCTC--------------------ATAC-T--T-TTG-----------------AGA-T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         690 30 -      5717 c----cattgt-atgccctctc--------------------atac-t--t-ttt-----------------aga-t
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7329 30 -     11567 c----cactgt-attctctcta--------------------atat-t--t-tgt-----------------aga-t
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8710 30 -     12945 c----cactgt-attctctcta--------------------atat-t--t-tgt-----------------aga-t
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6092 29 +     29618 c----tattgt-tttctctcta--------------------attc-g--t-t--t----------------ata-t
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6089 29 +     31569 c----tattgt-tttctctcta--------------------attc-g--t-t--t----------------ata-t
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6101 29 +     24756 c----tattgt-tttctctcta--------------------atcc-g--t-t--t----------------ata-t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6093 29 +     16388 c----tattgt-tttctctcta--------------------attc-g--t-t--t----------------ata-t
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810403 31 -   3914936 aatcat---------------c--------------------att--t--t-c--tctct-aa-tgccttt-aaa-a
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lophocebus_aterrimus.ctg367                               329738 30 -   1826925 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            3057 28 +     19643 C----TATCGT-TTTCTCTTGA--------------------GTCC-T--T-T-------------------ATA-T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5036716 28 -   6120653 c----tatcgt-tttctcttga--------------------gtcc-t--t-t-------------------ata-t
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611584 31 +  59628241 agtcat---------------t--------------------att--t--t-c--tctct-aa-tcccttt-aaa-a
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_1757516                              42020 30 -     61512 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369648 30 -  60120075 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21968 30 +     30207 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19071 30 -     24934 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21854 30 +     30527 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33044 30 -     50087 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42782 30 +     51645 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411356 30 - 187317192 C----CATTGT-TTTCCCTCTA--------------------ATAC-T--T-TTT-----------------aga-t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396239 30 +  25927173 C----CATTGT-TTTCCCTCTA--------------------ATAC-T--T-TTT-----------------aga-t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45370 30 -     62418 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22058 30 +     24253 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41815 30 +     59329 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267647 30 +    668171 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 18993 30 +     21031 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32726 30 +     33478 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220368 17 -    270270 A----T---------------C--------------------ATT-TT--T-G---------------TCT-GTA-A
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 479 I 1
s Mandrillus_leucophaeus.scaffold280                        319123 30 +  24302211 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353955 30 -    752769 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670619 31 -    737560 agccct---------------c--------------------att--t--t-c--tctct-aa-gctcttt-caa-a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217911 31 +    317179 agccct---------------c--------------------att--t--t-c--tctct-aa-gctcttt-caa-a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       147549 16 +    207569 a----t---------------c--------------------att--t--t-c--tct--------------ctg-a
i Megaderma_lyra.MegLyr_scaffold_4542                    I 482 I 1
s Mellivora_capensis.MelCap_flattened_line_19308             22916 31 -     74585 agtcat---------------c--------------------att--t--t-g--cct-tcaa-tctcttt-aaa-a
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 1
s Mico_argentatus.k141_582562                                 7080 30 +     17804 c----cattgt-attcccgcta--------------------atat-t--t-ttt-----------------aga-t
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7853 30 -     12984 c----cattgt-attcccgcta--------------------atat-t--t-ttt-----------------aga-t
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15815 30 -     26561 c----cattgt-attcccgcta--------------------atat-t--t-ttt-----------------aga-t
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981701 29 +  93316391 C----TATTGT-TTTCTCTCTA--------------------ATCC-T--T-T-----------------T-ATA-T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41068 23 +    145209 a----g---------------a---------------------tt--t--g-t--tttc--aa-ac--tta-ctc-a
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181775 16 +    200668 a----t---------------c--------------------att--t--t-c--tct--------------aca-a
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 477 I 125
s Miniopterus_natalensis.LDJU01000308.1                     495100 16 -   1897963 T----T---------------C--------------------ACG--c--t-a--tc-c-------------att-t
i Miniopterus_natalensis.LDJU01000308.1                  I 489 n 489
s Miniopterus_schreibersii.MinSch_scaffold_3531             134535 16 +    183988 T----T---------------C--------------------ACT--T--T-A---------------TCC-ATT-T
i Miniopterus_schreibersii.MinSch_scaffold_3531          I 489 n 489
s Miopithecus_ogouensis.k141_1534655                         19115 30 -     27822 c----cgttat-tttccctgta--------------------atac-t--t-tgt-----------------aga-t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5412 31 +     27589 aatcat---------------c--------------------att--t--t-c--tctct-aa-tgccttt-aaa-a
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 1
s Mirza_zaza.k141_766280                                     49559 29 -     62432 c----tattgt-tttctctcta--------------------atcc-t--t-t--t----------------ata-t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 175957 16 +    366855 a----t---------------c--------------------att--t--t-c--tct--------------ata-a
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 474 I 120
s Mungos_mungo.MunMun_flattened_line_18455                   15267 31 -     63510 agcctc---------------c--------------------att--t--t-c--tctct-aa-taccttt-aag-a
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 1
s Murina_feae.MurFea_scaffold_17764                          35136 15 +     47283 A----C---------------C--------------------ATT--T--T-C---------------TCT-ATA--
i Murina_feae.MurFea_scaffold_17764                      I 499 I 1158
s Mustela_putorius.JH418006.1                             14351855 31 +  14710649 agtcat---------------c--------------------att--t--t-t--cct-tcaa-tctcttt-aaa-a
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myotis_brandtii.KE162005.1                               9789581 15 +  10118263 a----c---------------c--------------------att--t--t-c--tct--------------ata--
i Myotis_brandtii.KE162005.1                             I 498 I 729
s Myotis_davidii.KB100139.1                                4383977 15 +   6019432 a----c---------------c--------------------att--t--t-c--tct--------------ata--
i Myotis_davidii.KB100139.1                              I 501 I 732
s Myotis_lucifugus.GL429869.1                               379805 15 +   4330536 a----c---------------c--------------------att--t--t-c--tct--------------ata--
i Myotis_lucifugus.GL429869.1                            I 494 I 726
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117094  4 +    130748 ------------------------------------------------------------------------ata-t
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 16 C 0
s Nasalis_larvatus.k141_1350636                              25431 30 +     34575 c----cattgc-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465798 31 -  31847680 aatcat---------------c--------------------att--t--t-c--tctct-aa-tgccttt-caa-a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_7894                   124619 16 -    149072 a----t---------------c--------------------att--t--t-c--tct--------------ata-a
i Noctilio_leporinus.NocLep_scaffold_7894                I 470 I 115
s Nomascus_annamensis.k141_1771965                           50375 30 -    132029 c----cactgt-tttccctcta--------------------atgc-t--t-ttt-----------------aga-t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6471 30 -     16345 c----cactgt-tttccctcta--------------------atgc-t--t-ttt-----------------aga-t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12355 30 +     22201 c----cactgt-tttccctcta--------------------atgc-t--t-ttt-----------------aga-t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410691 30 -  22158432 c----cactgt-tttccctcta--------------------atgc-t--t-ttt-----------------aga-t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22754 30 -     54323 c----cactgt-tttccctcta--------------------atgc-t--t-ttt-----------------aga-t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195199 31 +   9404916 agtcat---------------t--------------------att--t--t-c--tctct-aa-tcccttt-aaa-a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                             93631836 27 + 196305487 c----tattgt-ttt-tcttga--------------------gtcc-t--t-t-------------------ata-t
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1225 27 +      2758 c----tattgt-ttt-tcttga--------------------gtcc-t--t-t-------------------ata-t
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560090 27 - 199412804 c----tattgt-ttt-tcttga--------------------gtcc-t--t-t-------------------ata-t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448585 31 +   2017862 aatcat---------------c--------------------att--t--t-c--tctct-aa-tgccttt-aaa-a
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_171931              10497 19 -     14239 a----t---------------a---------------------tt--t--t-t--tttct-----c--t---cta-a
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36247 31 +    559221 agtcat---------------t--------------------att--t--t-c--tctct-aa-tcccttt-aaa-a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_649260                        35695 28 -     51505 c----tattgt-tttctcttaa--------------------gccc-t--t-t-------------------aaa-t
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             348710 28 +   1103335 C----TATTGT-TTTCTCTTAA--------------------GCCC-T--T-T-------------------AAA-T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468574 30 - 189151597 C----CACTGT-TTTCCttcta--------------------ataa-t--t-ttt-----------------aga-t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21126 31 -    230217 agccac---------------t--------------------gtt--t--t-c--tctct-aa-tcccttt-aaa-a
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                              18458452 31 -  18783137 agccac---------------t--------------------gtt--t--t-c--tctct-aa-tcccttt-aaa-a
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               3969177 31 +   8748460 agccac---------------t--------------------gtt--t--t-c--tctct-aa-tcccttt-aaa-a
i Panthera_tigris.KE722367.1                             C 0 I 1
s Papio_anubis.CM001495.2                                   239966 30 - 183742232 C----CATTGT-TTTCCCTCTA--------------------ATAC-T--T-TTT-----------------Aga-t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6432 30 +     21308 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287469 30 -  20919399 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19085 30 -     27687 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12221 30 +     16796 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19031 30 -     23640 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12040 31 +     78924 agccac---------------c--------------------att--t--t-c--tttct-aa-tgccttt-aaa-a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_1921260                          21943 24 +     31479 c----tattgt-tttctcttaa--------------------gtcc-t--t-t------------------------
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14313 24 -     24908 c----tattgt-tttctcttaa--------------------gtcc-t--t-t------------------------
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5888 30 +      7560 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61595 30 -     63152 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44194 30 +     45295 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1873 30 +      5735 C----CATTGT-TTTCCCTCTA--------------------ATAC-T--T-TTT-----------------aga-t
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62063 30 +    207309 t----cattgc-attccctcta--------------------atac-t--t-ttt-----------------aga-t
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3183 30 -     25401 t----cattgc-attccctcta--------------------atac-t--t-ttt-----------------aga-t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28898 30 +     58159 t----cattgc-attccctcta--------------------atac-t--t-ttt-----------------aga-t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29174 30 +     63561 t----cattgc-attccctcta--------------------atac-t--t-ttt-----------------aga-t
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28937 30 +     51148 t----cattgc-attccctcta--------------------atac-t--t-ttt-----------------aga-t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553930 30 -   4542175 t----cattgc-attccctcta--------------------atac-t--t-ttt-----------------aga-t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28921 30 +     51125 t----cattgc-attccctcta--------------------atac-t--t-ttt-----------------aga-t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5341 30 +     39866 c----cattgc-atttcctcta--------------------atat-t--t-ttt-----------------aaa-t
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           428 30 -      9282 c----cattgc-atttcctcta--------------------atat-t--t-ttt-----------------aaa-t
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39829 30 -     87950 c----cattgc-atttcctcta--------------------atat-t--t-ttt-----------------aaa-t
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40222 30 -     88961 c----cattgc-atttcctcta--------------------atat-t--t-ttt-----------------aaa-t
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4921 30 -     39403 c----cattgc-atttcctcta--------------------atat-t--t-ttt-----------------aaa-t
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39875 30 +     87928 c----cattgc-atttcctcta--------------------atat-t--t-ttt-----------------aaa-t
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4919 30 -     60166 c----cattgc-atttcctcta--------------------atat-t--t-ttt-----------------aaa-t
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11855 30 -     67232 c----cattgc-atttcctcta--------------------atat-t--t-ttt-----------------aaa-t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39771 30 -     90634 c----cattgc-atttcctcta--------------------atat-t--t-ttt-----------------aaa-t
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41239 30 +     89403 c----cattgc-atttcctcta--------------------atat-t--t-ttt-----------------aaa-t
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174192 30 - 189387572 C----CACTGT-TTTCCCTcta--------------------ataa-t--t-ttt-----------------aga-t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189190 30 -   9816681 c----cactgt-tttccctcta--------------------ataa-t--t-ttt-----------------aga-t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24372 30 +     69807 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41567 30 -     80239 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563180 30 -   2598838 c----tattgtttttttctcta--------------------atcc-t--t-t--t----------------ata-t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            818 29 -      7103 c----tattgt-tttttctcta--------------------atcc-t--t-t--t----------------ata-t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1415 29 -     11706 c----tattgt-tttttctcta--------------------attt-t--t-t--t----------------ata-t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5150 29 -     30655 c----tattgt-tttttctcta--------------------atct-t--t-t--t----------------ata-t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31475 29 +     46564 c----tattgt-tttttctcta--------------------atcc-t--t-t--t----------------ata-t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91746 29 -     98465 c----tattgt-tttttctcta--------------------atcc-t--t-t--t----------------ata-t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5385 29 +     35169 c----tattgt-tttttctcta--------------------atcc-t--t-t--t----------------ata-t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49025 16 -     66298 a----t---------------c--------------------att--t--t-c--tct--------------ata-a
i Pteronotus_parnellii.KE847780.1                        I 481 I 120
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1638 31 -     18639 agtcat---------------c--------------------att--t--t-t--cct-tcaa-tctcttt-aaa-a
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 1
s Pteropus_alecto.KB030862.1                               5837999 17 -  28871421 a----t---------------c--------------------att-tt--t-g--tct--------------cta-a
i Pteropus_alecto.KB030862.1                             I 477 I 1
s Pteropus_vampyrus.KN525825.1                             3534560 17 -   4952924 a----t---------------c--------------------att-tt--t-g--tct--------------cta-a
i Pteropus_vampyrus.KN525825.1                           I 477 I 1
s Puma_concolor.QAVW01001104.1                            18096003 31 +  38429054 agccac---------------t--------------------gtt--t--t-c--tctct-aa-tcccttt-aaa-a
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             23763 30 +     91421 c----cattgc-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150256 30 -   7812017 c----cattgc-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4633 30 +     72585 c----cattgc-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2910633 16 +   3329780 a----t---------------c--------------------att--t--t-c--tct--------------ata-a
i Rhinolophus_sinicus.LVEH01000134.1                     I 465 I 1
s Rhinopithecus_bieti.k119_221883                            25593 30 +     27361 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118941 30 + 195417433 C----CATTGT-TTTCCCTCTA--------------------ATAC-T--T-TTT-----------------aga-t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233201 30 -   7961872 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72008 17 -    116970 a----t---------------c--------------------att-tt--t-g--tct--------------cta-a
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 463 I 1
s Saguinus_bicolor.k141_1429097                               1026 30 +     27962 c----cattgt-atggcctctc--------------------atac-t--t-tct-----------------aga-t
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1032 29 +      6077 c----cattgt-atggcctctc--------------------aaat-t--t--tt-----------------aga-t
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1052 30 +      5971 c----cattgt-atgccctctc--------------------atgc-t--t-ttg-----------------aga-t
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1107 30 +      5932 C----CATTGT-ATGCCCTCTC--------------------ATAC-T--T-TTG-----------------AGA-T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1253 30 -      2099 C----CATTGT-ATGCCCTCTC--------------------ATAC-T--T-TTG-----------------AGA-T
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388284 30 - 209938924 c----cattgt-atggcctctc--------------------atac-t--t-tct-----------------agg-t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1054 30 +      5979 C----CATTGT-ATGCCCTCTC--------------------ATAC-T--T-TTG-----------------AGA-T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1431 29 -      4301 t----cattgt-atggcctctc--------------------aaat-t--t--tt-----------------aga-t
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235503 30 +   5703754 c----cattgt-gttccctcta--------------------atat-t--t-ttt-----------------aga-t
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5093 30 +     21866 c----cattgt-gttccctcta--------------------atat-t--t-ttt-----------------aga-t
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113234 20 +    313613 c----t---------------a----ccatttctctaatcctt----------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 4
s Semnopithecus_entellus.k141_158471                         22080 30 +     27374 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25599 30 +     58920 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12095 30 -     45317 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19753 30 -     42441 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22433 30 -     29113 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25502 30 -     48123 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855903 16 -   1910179 t----t---------------a--------------------att--t--t-t---ct-t------------taa-t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3644 31 -     97271 agtcat---------------c--------------------att--t--t-t--tctct-aa-gccattt-aaa-a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629             121674 31 +    196729 agcctc---------------c--------------------att--t--t-c--tctct-ga-taccttt-aaa-a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Symphalangus_syndactylus.tarseq_199                       387662 30 +   1523678 c----cactgt-tttccctcta--------------------atgc-t--t-ttt-----------------aga-t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_231636                1190 16 +      3470 T----T---------------C--------------------CCT--T--T-G---------------TTC-ATT-T
i Tadarida_brasiliensis.TadBra_scaffold_231636           I 496 n 496
s Tamandua_tetradactyla.TamTet_scaffold_224794                 212  4 +      5583 ------------------------------------------------------------------------ATA-T
i Tamandua_tetradactyla.TamTet_scaffold_224794           N 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188296 26 +    199430 agacat---------------c--------------------att--t--t-c--tctct-ct-tc--t----aa-a
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    102246 31 -    539355 agccat---------------c--------------------att--t--t-c--tctct-aa--ctcttttaaa-a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Theropithecus_gelada.CM009954.1                           349952 30 - 186847797 C----CATTGT-TTTCCCTCTA--------------------ATAC-T--T-TTT-----------------aga-t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17331  4 -     31044 ------------------------------------------------------------------------ata-t
i Tolypeutes_matacus.TolMat_scaffold_31955               I 21 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476835 16 -    610378 a----t---------------c--------------------ctt--t--t-c--tct--------------gta-a
i Tonatia_saurophila.TonSau_scaffold_294                 I 477 I 125
s Trachypithecus_auratus.k141_1189070                        17646 30 +     26378 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30328 30 -     78344 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16967 30 +     25722 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25190 30 -     62838 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25307 30 +     46913 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6115 30 -     28527 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27129 30 -     64340 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25166 30 -     63452 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6609 30 +     22490 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                           38 30 -      6147 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7033 30 -     13050 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252270 30 -   6242583 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58001 30 +     59866 c----cattgt-tttccctcta--------------------atac-t--t-ttt-----------------aga-t
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830235 30 -   4065304 c----cataat-tttctttcta--------------------agcc-t--ttt--t----------------aga-c
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4787 30 -     70247 C----CATAAT-TTTCTTTCTA--------------------AGCC-T--TTT-----------------T-GGA-C
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104460 33 -    105689 A----T---------------ATCA-C--TGTCTCTAATCTTATT--T--T-T---------------TGT-TAA-A
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178534 29 +   5085361 agtcat---------------c--------------------att--t--t-c--tct---aa-tgccttt-taa-a
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_787544                                  22251 21 -     30710 c----tatagt-tttctctcta--------------------atcc-------------------------------
i Varecia_rubra.k141_787544                              C 0 I 7
s Varecia_variegata.k141_289850                              21158 21 -    147434 c----tatagt-tttctctcta--------------------atcc-------------------------------
i Varecia_variegata.k141_289850                          C 0 I 7
s Vulpes_lagopus.VulLag_flattened_line_12041                101965 31 -    112863 agttat---------------t--------------------att--t--t-c--tctct-aa-tcccttt-aaa-a
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732         25806 31 -     86975 aatcat---------------c--------------------att--t--t-c--tctct-aa-tgccttt-aaa-a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tarsius_wallacei.k141_226975                                4353  0 +     20590 C
e Tarsius_lariang.k141_1780720                                4314  0 +      6850 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Cephalopachus_bancanus.k141_72622                            791  0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Carlito_syrichta.NW_007259797.1                           267622  0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1362 13 +     36723 T-----T--------T-C--CC------TTTA-----ATT
s Acinonyx_jubatus.LLWD01001279.1                           809773 13 +   1699592 t-----c--------t-t--cc------tgta-----ttt
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412040 13 +  29979442 t-----c--------t-t--cc------ttta-----ttt
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44650 13 +     53615 t-----t--------t-t--cc------ttta-----att
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40473 13 +     44087 t-----t--------t-t--cc------ttta-----att
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13177 13 -     21945 t-----t--------t-t--ct------ttta-----att
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14855 13 +     32033 t-----t--------t-t--cc------ttta-----att
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69412  6 -     84148 --------------------cc------tttg--------
i Alouatta_belzebul.k141_1011583                         I 3 I 3
s Alouatta_caraya.k141_1109140                               41638  9 -     78289 --------------------cc------ttta-----ttt
i Alouatta_caraya.k141_1109140                           I 3 I 5
s Alouatta_discolor.k141_2561099                             41086  9 +     55831 --------------------cc------ttta-----ttt
i Alouatta_discolor.k141_2561099                         I 3 I 5
s Alouatta_juara.k141_1687208                                39524  9 -     64179 --------------------cc------ttta-----ttt
i Alouatta_juara.k141_1687208                            I 3 I 5
s Alouatta_macconnelli.k141_361275                           21170  9 -     24835 --------------------cc------ttta-----ttt
i Alouatta_macconnelli.k141_361275                       I 3 I 5
s Alouatta_nigerrima.k141_376068                             38153  9 +     45454 --------------------cc------ttta-----ttt
i Alouatta_nigerrima.k141_376068                         I 3 I 5
s Alouatta_palliata.k141_638677                              43852  9 +     70886 --------------------cc------ttta-----ttt
i Alouatta_palliata.k141_638677                          I 3 I 5
s Alouatta_puruensis.k141_251022                              5976  9 +     30854 --------------------cc------ttta-----ttt
i Alouatta_puruensis.k141_251022                         I 3 I 5
s Alouatta_seniculus.k141_928287                             30115  9 +     42133 --------------------cc------ttta-----ttt
i Alouatta_seniculus.k141_928287                         I 3 I 5
s Anoura_caudifer.AnoCau_scaffold_1412                      173941  5 -    412891 ------------------------------ca-----ttt
i Anoura_caudifer.AnoCau_scaffold_1412                   I 125 C 0
s Aotus_azarae.k141_118258                                   47925 13 -     65372 t-----c--------t-c--cc------ttta-----ttt
i Aotus_azarae.k141_118258                               C 0 I 5
s Aotus_griseimembra.k141_982342                             41670 13 +     43593 t-----c--------t-c--cc------ttta-----ttt
i Aotus_griseimembra.k141_982342                         C 0 I 5
s Aotus_nancymaae.KZ198451.1                                669683 13 +   5030052 T-----C--------T-C--CC------TTTA-----TTT
i Aotus_nancymaae.KZ198451.1                             C 0 I 5
s Aotus_trivirgatus.k141_192090                              21325 13 -     23494 t-----c--------t-c--cc------ttta-----ttt
i Aotus_trivirgatus.k141_192090                          C 0 I 5
s Aotus_vociferans.k141_944972                                6461 13 +      8415 t-----c--------t-c--cc------ttta-----ttt
i Aotus_vociferans.k141_944972                           C 0 I 5
s Arctocebus_calabarensis.k141_1364444                       16523  6 -     45910 -----------------------------tta-----ttt
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2230  5 -     15198 ------------------------------CA-----TTT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 106 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271910 13 +  21539123 t-----c--------c-c--cc------tttg-----ttt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 5
s Ateles_belzebuth.k141_1572163                               8078 13 +     48076 t-----t--------c-c--cc------tttg-----ttt
i Ateles_belzebuth.k141_1572163                          C 0 I 5
s Ateles_chamek.k141_615173                                   3214 13 -     28759 t-----c--------c-c--cc------tttg-----ttt
i Ateles_chamek.k141_615173                              C 0 I 5
s Ateles_geoffroyi_a.k141_1283730                              30767 13 +     44353 t-----c--------c-c--cc------tttg-----ttt
i Ateles_geoffroyi_a.k141_1283730                          C 0 I 5
s Ateles_marginatus.k141_970259                              46139 13 -     71267 t-----t--------c-c--cc------tttg-----ttt
i Ateles_marginatus.k141_970259                          C 0 I 5
s Ateles_paniscus.k141_866194                                20198 13 -     33135 t-----t--------c-c--cc------tttg-----ttt
i Ateles_paniscus.k141_866194                            C 0 I 5
s Avahi_laniger.k141_2756659                                  3334 13 +     11645 t-----c--------t-t--cc------ttta-----ttt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3335 13 -     19611 t-----c--------t-t--cc------ttta-----ttt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5103 13 +     28062 t-----c--------t-c--cc------ttta-----ttt
i Cacajao_ayresi.k141_96119                              C 0 I 5
s Cacajao_calvus.k141_89051                                  40397 13 -     91139 t-----t--------t-c--cc------ttta-----ttt
i Cacajao_calvus.k141_89051                              C 0 I 5
s Cacajao_hosomi.k141_81245                                  17923 13 +     95584 t-----c--------t-c--cc------ttta-----ttt
i Cacajao_hosomi.k141_81245                              C 0 I 5
s Cacajao_melanocephalus.k141_619699                         17836 13 +    119600 t-----c--------t-c--cc------ttta-----ttt
i Cacajao_melanocephalus.k141_619699                     C 0 I 5
s Callibella_humilis.k141_1233062                             7327 13 +     18648 t-----c--------t-c--cc------ttta-----ttt
i Callibella_humilis.k141_1233062                        C 0 I 5
s Callimico_goeldii.k141_1609886                              7011 13 -     13885 t-----c--------t-c--cc------ttta-----ttt
i Callimico_goeldii.k141_1609886                         C 0 I 5
s Callithrix_geoffroyi.k119_473390                           15688 13 +     17162 t-----c--------t-c--cc------ttta-----ttt
i Callithrix_geoffroyi.k119_473390                       C 0 I 5
s Callithrix_jacchus.pat_scaffold_3                      165450643 13 + 189096842 T-----C--------T-C--CC------TTTA-----TTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 5
s Callithrix_kuhlii.k119_404482                              16936 13 -     18408 t-----c--------t-c--cc------ttta-----ttt
i Callithrix_kuhlii.k119_404482                          C 0 I 5
s CanFam4.chr16                                           42502345 13 +  60362399 t-----c--------t-t--cc------ttta-----ttt
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5975 13 -     23171 t-----c--------t-t--cc------ttta-----ttt
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219336 13 +   9314153 t-----c--------t-t--cc------ttta-----ttt
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            41612461 13 +  59632846 t-----c--------t-t--cc------ttta-----ttt
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            45104031 13 -  63665305 t-----c--------t-t--cc------ttta-----ttt
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2308  5 +      5315 ------------------------------ca-----ctt
i Carollia_perspicillata.CarPer_scaffold_170178          I 113 C 0
s Cebuella_niveiventris.k141_592277                           2222 13 -     12580 t-----c--------t-c--cc------ttta-----ttt
i Cebuella_niveiventris.k141_592277                      C 0 I 5
s Cebuella_pygmaea.k141_145798                               40108 13 +     53515 t-----c--------t-c--cc------ctta-----ttt
i Cebuella_pygmaea.k141_145798                           C 0 I 5
s Cebus_albifrons.Contig27                                  368310 13 -  26074798 t-----c--------t-c--cc------ttta-----ttt
i Cebus_albifrons.Contig27                               C 0 I 5
s Cebus_olivaceus.k141_1404781                                5199 13 -     34880 t-----c--------t-c--cc------ttta-----ttt
i Cebus_olivaceus.k141_1404781                           C 0 I 5
s Cebus_unicolor.k141_1654760                                64294 13 -     89041 t-----c--------t-c--cc------ttta-----ttt
i Cebus_unicolor.k141_1654760                            C 0 I 5
s Ceratotherium_simum.JH767749.1                          15489290 13 -  27778364 t-----c--------t-t--cc------ttta-----ttt
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16123 13 +     27315 t-----c--------t-t--cc------ttta-----ttt
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 1 C 0
s Cercocebus_atys.KQ010504.1                                137812 13 -   4669795 t-----t--------t-c--cc------ttta-----att
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41552 13 +     47900 t-----t--------t-c--cc------ttta-----att
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41385 13 -     44860 t-----t--------t-c--cc------ttta-----att
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41368 13 -    148725 t-----t--------t-c--cc------ttta-----att
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24431 13 -     40656 t-----t--------t-t--cc------ttta-----att
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4367 13 +     20796 t-----t--------t-t--cc------ttta-----att
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8623 13 -     17524 t-----t--------t-t--cc------ttta-----att
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24311 13 -     34525 t-----t--------t-t--cc------ttta-----att
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9021 13 -     25376 t-----t--------t-t--cc------ttta-----att
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361587 13 -  39242232 t-----t--------t-t--cc------ttta-----att
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267331 13 +  21565898 t-----t--------t-t--cc------ttta-----att
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28787 13 -     45857 t-----t--------t-t--cc------ttta-----att
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24576 13 -     32606 t-----t--------t-t--cc------ttta-----att
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          762 13 +      8499 t-----t--------t-t--cc------ttta-----att
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22280 13 +     70610 t-----t--------t-t--cc------ttta-----att
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19140 13 +     36323 t-----t--------t-t--cc------ttta-----att
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10332  3 -     19938 a-----a--------a------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 52
s Cheirogaleus_major.k141_666340                             27761 13 -     33796 t-----c--------t-t--ct------ttta-----ttt
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1948 13 -     15404 t-----c--------t-t--ct------ttta-----ttt
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6197 13 -     32913 t-----c--------t-t--cc------ttta-----ttt
i Cheracebus_lucifer.k141_2312002                        C 0 I 5
s Cheracebus_lugens.k141_1179667                             16610 13 -     40346 t-----c--------t-t--cc------ttta-----ttt
i Cheracebus_lugens.k141_1179667                         C 0 I 5
s Cheracebus_regulus.k141_471822                             16874 13 +    216457 t-----c--------t-t--cc------ttta-----ttt
i Cheracebus_regulus.k141_471822                         C 0 I 5
s Cheracebus_torquatus.k141_890198                           16658 13 +     39636 t-----c--------t-t--cc------ttta-----ttt
i Cheracebus_torquatus.k141_890198                       C 0 I 5
s Chiropotes_albinasus.k141_1946120                           1058 13 +      5346 t-----c--------t-c--cc------ttta-----ttt
i Chiropotes_albinasus.k141_1946120                      C 0 I 5
s Chiropotes_israelita.k141_313004                           39743 13 -    112038 t-----c--------t-c--cc------ttta-----ttt
i Chiropotes_israelita.k141_313004                       C 0 I 5
s Chiropotes_sagulatus.k141_1113111                           5315 13 +     34062 t-----c--------t-c--cc------ttta-----ttt
i Chiropotes_sagulatus.k141_1113111                      C 0 I 5
s Chlorocebus_aethiops.ctg25                                340036 13 +  18827391 t-----t--------t-t--cc------ttta-----att
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6647 13 -     44032 t-----t--------t-t--cc------ttta-----att
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301362 13 - 135778131 t-----t--------t-t--cc------ttta-----att
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405927 13 -   2368649 t-----t--------t-c--cc------ttta-----att
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375090 13 - 200372422 t-----t--------t-c--cc------ttta-----att
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5814 13 -      6605 t-----t--------t-c--cc------ttta-----att
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804520 18 +  53390261 t-----a--------a-c--cc-cttccttta-----ttt
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_101005         10388  5 +     10921 ------------------------------TT-----TTT
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1011 13 +     87169 c-----c--------t-t--cc------ttta-----ttt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Dasypus_novemcinctus.JH564415.1                          2107663  3 -   2246927 A-----A--------A------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 50
s Daubentonia_madagascariensis.ctg71                        289776 13 +  12879189 t-----c--------t-t--cc------ttta-----ttt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11861974  5 -  20541912 ------------------------------ca-----ttt
i Desmodus_rotundus.KZ672289.1                           I 125 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661574 13 -   1390856 t-----c--------t-t--cc------ttta-----ttt
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136367 13 -    198055 t-----c--------t-t--cc------ttta-----ttt
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Eidolon_helvum.AWHC01266696.1                               3425  5 +     19438 ------------------------------cc-----ttt
i Eidolon_helvum.AWHC01266696.1                          I 1 C 0
s Echinops_telfairi.JH980293.1                            62850773 12 - 111700974 T-----CTTGCCTTTC-A----------------------
i Echinops_telfairi.JH980293.1                           C 0 I 6
s Elephantulus_edwardii.JH947257.1                         9104848 20 -  10337057 t-----a----catttgacact------tgcc-----ttt
i Elephantulus_edwardii.JH947257.1                       C 0 I 159
s Enhydra_lutris.KZ291758.1                               24913079 13 +  41312741 t-----c--------t-t--cc------ttta-----ttt
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Equus_asinus.JREZ01000139.1                              3038556 13 -   4378816 t-----c--------t-t--cc------ttta-----ttt
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               21372490 13 +  39960074 t-----c--------t-t--cc------ttta-----ttt
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                              409276 13 -    498745 t-----c--------t-t--cc------ttta-----ttt
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erythrocebus_patas.Contig38                               259594 13 +  21539334 t-----t--------t-t--cc------ttta-----att
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243438 13 - 206538554 t-----c--------t-t--cc------tgta-----ttt
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                          185113220 13 - 205367284 t-----c--------t-t--cc------tgta-----ttt
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24568 13 -     30238 t-----c--------t-t--cc------tgta-----ttt
i Felis_nigripes.FelNig_flattened_line_31944             I 1 C 0
s Galago_moholi.ctg3793                                     120592 13 -    137831 t-----c--------c-t--cc------ttta-----ttt
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4133 13 +     22493 t-----c--------c-t--cc------ttta-----ttt
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17608 13 +     32986 T-----C--------C-T--CC------TTTA-----TTT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16188 13 +     18121 t-----c--------t-t--ct------tttg-----ttt
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1725 13 -      8343 t-----t--------t-c--cc------ttta-----att
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251215 13 - 186649187 t-----t--------t-c--cc------ttta-----att
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27545 13 -    327341 t-----t--------t-t--ac------ttta-----ttt
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547319  5 -   1711038 ------------------------------cc-----ttt
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               46636  5 +     49977 ------------------------------cc-----ttt
i Hipposideros_galeritus.HipGal_scaffold_23202           I 1 C 0
s Hoolock_leuconedys.ctg274                                    139109 13 -    630532 t-----t--------t-c--cc------ttta-----att
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66003 13 +     83186 t-----c--------t-t--cg------ttta-----ttt
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1 C 0
s Hylobates_agilis.k141_1155965                               2143 13 +     12352 t-----t--------t-c--cc------ttta-----att
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9326 13 +     55766 t-----t--------t-c--cc------ttta-----att
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048664 13 + 191637585 t-----t--------t-c--cc------ttta-----att
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7797996 13 +  11177569 t-----t--------t-c--cc------ttta-----att
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_1634743                                    1093 13 -      1784 t-----c--------t-t--cc------ttta-----ttt
i Indri_indri.k141_1634743                               I 228 I 31
s Lagothrix_lagothricha.k141_246028                          40458 11 +    110728 ---------------t-c--cc------ttta-----ttt
i Lagothrix_lagothricha.k141_246028                      C 0 I 5
s Leontocebus_fuscicollis.k141_2994775                        1138 13 -     13097 T-----C--------T-C--CC------ttta-----ttt
i Leontocebus_fuscicollis.k141_2994775                   C 0 I 5
s Leontocebus_illigeri.k141_2951200                           1089 13 +      5940 T-----C--------T-C--CC------TTTA-----TTT
i Leontocebus_illigeri.k141_2951200                      C 0 I 5
s Leontocebus_nigricollis.k141_3905062                         720 13 -      5717 t-----c--------t-g--cc------ttta-----ttt
i Leontocebus_nigricollis.k141_3905062                   C 0 I 5
s Leontopithecus_chrysomelas.k141_1327670                     7359 13 -     11567 t-----c--------t-c--cc------ttta-----ttt
i Leontopithecus_chrysomelas.k141_1327670                C 0 I 5
s Leontopithecus_rosalia.k141_349454                          8740 13 -     12945 t-----c--------t-c--cc------ttta-----ttt
i Leontopithecus_rosalia.k141_349454                     C 0 I 5
s Lepilemur_ankaranensis.k141_567626                          6121 13 +     29618 t-----c--------t-t--cc------ttta-----ttt
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6118 13 +     31569 t-----a--------t-t--cc------ttta-----ttt
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6130 13 +     24756 t-----c--------t-t--cc------ttta-----ttt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6122 13 +     16388 t-----c--------t-t--cc------ttta-----ttt
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810435 13 -   3914936 t-----c--------t-t--cc------ttta-----ttt
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lophocebus_aterrimus.ctg367                               329768 13 -   1826925 t-----t--------t-c--cc------ttta-----att
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            3085  9 +     19643 T-----C--------C-T--CC------TTC---------
i Loris_lydekkerianus.k141_2031736                       C 0 I 3543
s Loris_tardigradus.ctg83                                  5036744  9 -   6120653 t-----c--------c-t--cc------ttc---------
i Loris_tardigradus.ctg83                                C 0 I 3543
s Lycaon_pictus.CM007581.1                                41611616 13 +  59628241 t-----c--------t-t--cc------ttta-----ttt
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_1757516                              42050 13 -     61512 t-----t--------t-c--cc------ttta-----att
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369678 13 -  60120075 t-----t--------t-c--cc------ttta-----att
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                21998 13 +     30207 t-----t--------t-c--cc------ttta-----att
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19101 13 -     24934 t-----t--------t-c--cc------ttta-----att
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21884 13 +     30527 t-----t--------t-c--cc------ttta-----att
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33074 13 -     50087 t-----t--------t-c--cc------ttta-----att
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42812 13 +     51645 t-----t--------t-c--cc------ttta-----att
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411386 13 - 187317192 t-----t--------t-c--cc------ttta-----att
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396269 13 +  25927173 t-----t--------t-c--cc------ttta-----att
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45400 13 -     62418 t-----t--------t-c--cc------ttta-----att
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22088 13 +     24253 t-----t--------t-c--cc------ttta-----att
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41845 13 +     59329 t-----t--------t-c--cc------ttta-----att
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267677 13 +    668171 t-----t--------t-c--cc------ttta-----att
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19023 13 +     21031 t-----t--------t-c--cc------ttta-----att
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32756 13 +     33478 t-----t--------t-c--cc------ttta-----att
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220386  5 -    270270 ------------------------------CC-----TTT
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                        319153 13 +  24302211 t-----t--------t-c--cc------ttta-----att
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353985 13 -    752769 t-----t--------t-c--cc------ttta-----att
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670650 13 -    737560 t-----c--------t-t--cc------ttta-----ttt
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217942 13 +    317179 t-----c--------t-t--cc------ttta-----ttt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       147566  5 +    207569 ------------------------------ct-----ttt
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             22948 13 -     74585 t-----c--------t-t--cc------ttta-----ttt
i Mellivora_capensis.MelCap_flattened_line_19308         I 1 C 0
s Mico_argentatus.k141_582562                                 7110 13 +     17804 t-----c--------t-c--cc------ttta-----ttt
i Mico_argentatus.k141_582562                            C 0 I 5
s Mico_humeralifer.k141_1180625                               7883 13 -     12984 t-----c--------t-c--cc------ttta-----ttt
i Mico_humeralifer.k141_1180625                          C 0 I 5
s Mico_schneideri.k141_1877700                                     15845 13 -     26561 t-----c--------t-c--cc------ttta-----ttt
i Mico_schneideri.k141_1877700                                 C 0 I 5
s Microcebus_murinus.CM007674.1                           74981730 13 +  93316391 T-----C--------t-g--cc------ttta-----ttt
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181916  5 +    200668 ------------------------------ca-----ttt
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 125 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41091 12 +    145209 t-----tttacctttc-a----------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 6
s Miopithecus_ogouensis.k141_1534655                         19145 13 -     27822 t-----t--------t-t--cc------ttta-----att
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5444 13 +     27589 t-----c--------t-c--cc------ttta-----ttt
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 1 C 0
s Mirza_zaza.k141_766280                                     49588 13 -     62432 t-----c--------t-t--cc------ttta-----ttt
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176093  5 +    366855 ------------------------------ca-----ttt
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 120 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15299 13 -     63510 t-----t--------t-t--ac------ttta-----ttt
i Mungos_mungo.MunMun_flattened_line_18455               I 1 C 0
s Mustela_putorius.JH418006.1                             14351887  9 +  14710649 t-----c--------t-t--c----------a-----ttt
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117098  3 +    130748 a-----a--------a------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 58
s Nasalis_larvatus.k141_1350636                              25461 13 +     34575 t-----t--------t-c--cc------ttta-----att
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465830 13 -  31847680 t-----c--------t-t--cc------ttta-----ttt
i Neomonachus_schauinslandi.NINY01007730.1               I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   124750  5 -    149072 ------------------------------ca-----ttt
i Noctilio_leporinus.NocLep_scaffold_7894                I 115 C 0
s Nomascus_annamensis.k141_1771965                           50405 13 -    132029 t-----t--------t-c--cc------ttta-----att
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6501 13 -     16345 t-----t--------t-c--cc------ttta-----att
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12385 13 +     22201 t-----t--------t-c--cc------ttta-----att
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410721 13 -  22158432 t-----t--------t-c--cc------ttta-----att
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22784 13 -     54323 t-----t--------t-c--cc------ttta-----att
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195231 13 +   9404916 t-----c--------t-t--cc------ttta-----ttt
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                             93631863 12 + 196305487 t-----c--------c-t--cc-------tta-----ttt
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1252 12 +      2758 t-----c--------c-t--cc-------tta-----ttt
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560117 12 - 199412804 t-----c--------c-t--cc-------tta-----ttt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448617 13 +   2017862 t-----c--------t-t--cc------ttta-----ttt
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              10516 19 -     14239 t-----c----ctttt-aaact------ctta-----ttt
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36279 13 +    559221 t-----c--------t-t--cc------tttg-----ttt
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_649260                        35723 13 -     51505 t-----c--------c-t--cc------ttta-----ttt
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             348738 13 +   1103335 T-----C--------C-T--CC------TTTA-----TTT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468604 13 - 189151597 t-----t--------t-c--cc------ttta-----att
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21158 13 -    230217 t-----c--------t-t--cc------ttta-----ttt
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                              18458484 13 -  18783137 t-----c--------t-t--cc------ttta-----ttt
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               3969209 13 +   8748460 t-----c--------t-t--cc------ttta-----ttt
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                   239996 13 - 183742232 t-----t--------t-c--cc------ttta-----att
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6462 13 +     21308 t-----t--------t-c--cc------ttta-----att
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287499 13 -  20919399 t-----t--------t-c--cc------ttta-----att
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19115 13 -     27687 t-----t--------t-c--cc------ttta-----att
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12251 13 +     16796 t-----t--------t-c--cc------ttta-----att
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19061 13 -     23640 t-----t--------t-c--cc------ttta-----att
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12072 13 +     78924 t-----c--------t-t--ac------tcta-----ttt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_1921260                          21967  6 +     31479 -----------------------------tta-----ttt
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14337  6 -     24908 -----------------------------tta-----ttt
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5918 13 +      7560 t-----t--------t-c--cc------ttta-----att
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61625 13 -     63152 t-----t--------t-c--cc------ttta-----att
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44224 13 +     45295 t-----t--------t-c--cc------ttta-----att
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1903 13 +      5735 t-----t--------t-c--cc------ttta-----att
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62093 13 +    207309 t-----c--------t-c--cc------ttta-----ttt
i Pithecia_albicans.k141_1239476                         C 0 I 5
s Pithecia_chrysocephala.k141_785207                          3213 13 -     25401 t-----c--------t-c--cc------ttta-----ttt
i Pithecia_chrysocephala.k141_785207                     C 0 I 5
s Pithecia_hirsuta.k141_640380                               28928 13 +     58159 t-----c--------t-c--cc------ttta-----ttt
i Pithecia_hirsuta.k141_640380                           C 0 I 5
s Pithecia_mittermeieri.k141_1280039                         29204 13 +     63561 t-----c--------t-c--cc------ttta-----ttt
i Pithecia_mittermeieri.k141_1280039                     C 0 I 5
s Pithecia_pissinattii.k141_878371                           28967 13 +     51148 t-----c--------t-c--cc------ttta-----ttt
i Pithecia_pissinattii.k141_878371                       C 0 I 5
s Pithecia_pithecia.tarseq_165                              553960 13 -   4542175 t-----c--------t-c--cc------ttta-----ttt
i Pithecia_pithecia.tarseq_165                           C 0 I 5
s Pithecia_vanzolinii.k141_1369553                           28951 13 +     51125 t-----c--------t-c--cc------ttta-----ttt
i Pithecia_vanzolinii.k141_1369553                       C 0 I 5
s Plecturocebus_bernhardi.k141_2549090                        5371 13 +     39866 t-----c--------t-c--cc------ttta-----ttt
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 5
s Plecturocebus_brunneus.k141_862875                           458 13 -      9282 t-----c--------t-c--cc------ttta-----ttt
i Plecturocebus_brunneus.k141_862875                     C 0 I 5
s Plecturocebus_caligatus.k141_1382851                       39859 13 -     87950 t-----c--------t-c--cc------ttta-----ttt
i Plecturocebus_caligatus.k141_1382851                   C 0 I 5
s Plecturocebus_cinerascens.k141_1164729                     40252 13 -     88961 t-----c--------t-c--ct------ttta-----ttt
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 5
s Plecturocebus_cupreus.k141_2351393                          4951 13 -     39403 t-----c--------t-c--cc------ttta-----ttt
i Plecturocebus_cupreus.k141_2351393                     C 0 I 5
s Plecturocebus_dubius.k141_1058799                          39905 13 +     87928 t-----c--------t-c--cc------ttta-----ttt
i Plecturocebus_dubius.k141_1058799                      C 0 I 5
s Plecturocebus_grovesi.k141_2013005                          4949 13 -     60166 t-----c--------t-c--cc------ttta-----ttt
i Plecturocebus_grovesi.k141_2013005                     C 0 I 5
s Plecturocebus_hoffmannsi.k141_3303950                      11885 13 -     67232 t-----c--------t-c--cc------ttta-----ttt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 5
s Plecturocebus_miltoni.k141_349282                          39801 13 -     90634 t-----c--------t-c--ct------ttta-----ttt
i Plecturocebus_miltoni.k141_349282                      C 0 I 5
s Plecturocebus_moloch.k141_1031110                          41269 13 +     89403 t-----c--------t-c--cc------ttta-----ttt
i Plecturocebus_moloch.k141_1031110                      C 0 I 5
s Pongo_abelii.CM009266.2                                   174222 18 - 189387572 t-----t--------t-c--cc------tttactttaatt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189220 18 -   9816681 t-----t--------t-c--cc------tttactttaatt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24402 13 +     69807 t-----t--------t-c--cc------ttta-----att
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41597 13 -     80239 t-----t--------t-c--cc------ttta-----ctt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563210 13 -   2598838 t-----c--------t-t--cc------ttta-----ttt
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            847 13 -      7103 t-----c--------t-t--cc------ttta-----ttt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1444 13 -     11706 t-----c--------t-t--cc------ttta-----ttt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5179 13 -     30655 t-----c--------t-t--cc------ttta-----ttt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31504 13 +     46564 t-----c--------t-t--cc------ttta-----ttt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91775 13 -     98465 t-----c--------t-t--cc------ttta-----ttt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5414 13 +     35169 t-----c--------t-t--cc------ttta-----ttt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49161  5 -     66298 ------------------------------ca-----ttt
i Pteronotus_parnellii.KE847780.1                        I 120 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1670 13 -     18639 t-----c--------t-t--ct------ttta-----ttt
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 1 C 0
s Pteropus_alecto.KB030862.1                               5838017  5 -  28871421 ------------------------------cc-----tgt
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             3534578  5 -   4952924 ------------------------------cc-----tgt
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            18096035 13 +  38429054 t-----c--------t-t--cc------ttta-----ttt
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             23793 13 +     91421 t-----t--------t-c--cc------ttta-----att
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150286 13 -   7812017 t-----t--------t-c--cc------ttta-----att
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4663 13 +     72585 t-----t--------t-c--cc------ttta-----att
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2910650  5 +   3329780 ------------------------------cc-----ttt
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_221883                            25623 13 +     27361 t-----t--------t-c--cc------ttta-----att
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118971 13 + 195417433 t-----t--------t-c--cc------ttta-----att
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233231 13 -   7961872 t-----t--------t-c--cc------ttta-----att
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72026  5 -    116970 ------------------------------cc-----ttt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 1 C 0
s Saguinus_bicolor.k141_1429097                               1056 13 +     27962 t-----c--------t-c--cc------ttta-----ttt
i Saguinus_bicolor.k141_1429097                          C 0 I 5
s Saguinus_geoffroyi.k141_3779887                             1061 13 +      6077 t-----c--------t-c--cc------ttta-----ttt
i Saguinus_geoffroyi.k141_3779887                        C 0 I 5
s Saguinus_imperator.k141_1898058                             1082 13 +      5971 t-----c--------t-c--cc------ttta-----ttt
i Saguinus_imperator.k141_1898058                        C 0 I 5
s Saguinus_inustus.k141_2469308                               1137 13 +      5932 T-----C--------T-C--CC------TTTA-----TTT
i Saguinus_inustus.k141_2469308                          C 0 I 5
s Saguinus_labiatus.k141_1571581                              1283 13 -      2099 T-----C--------T-C--CC------ttta-----ttt
i Saguinus_labiatus.k141_1571581                         C 0 I 5
s Saguinus_midas.LG03                                       388314 13 - 209938924 t-----c--------t-c--cc------ttta-----ttt
i Saguinus_midas.LG03                                    C 0 I 5
s Saguinus_mystax.k141_8077960                                1084 13 +      5979 T-----C--------T-C--CC------TTTA-----TTT
i Saguinus_mystax.k141_8077960                           C 0 I 5
s Saguinus_oedipus.k141_1466288                               1460 13 -      4301 t-----c--------t-c--cc------ttta-----ttt
i Saguinus_oedipus.k141_1466288                          C 0 I 5
s Sapajus_apella.ctg103                                     235533 13 +   5703754 t-----c--------t-c--cc------ttta-----ttt
i Sapajus_apella.ctg103                                  C 0 I 5
s Sapajus_macrocephalus.k141_796559                           5123 13 +     21866 t-----c--------t-c--cc------ttta-----ttt
i Sapajus_macrocephalus.k141_796559                      C 0 I 5
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113258 18 +    313613 a-----a--------g-a--ac-cttacttta-----ttt
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 4 C 0
s Semnopithecus_entellus.k141_158471                         22110 13 +     27374 t-----t--------t-c--cc------ttta-----att
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25629 13 +     58920 t-----t--------t-c--cc------ttta-----att
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12125 13 -     45317 t-----t--------t-c--cc------ttta-----att
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19783 13 -     42441 t-----t--------t-c--cc------ttta-----att
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22463 13 -     29113 t-----t--------t-c--cc------ttta-----att
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25532 13 -     48123 t-----t--------t-c--cc------ttta-----att
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855919 24 -   1910179 atcctga--------a-a--actcgtccttta-----ttt
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3676 13 -     97271 t-----c--------t-t--cc------ttta-----ttt
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121706 13 +    196729 t-----t--------t-t--ac------ttta-----ttc
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Symphalangus_syndactylus.tarseq_199                       387692 13 +   1523678 t-----t--------t-c--cc------ttta-----att
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 216  3 +      5583 A-----A--------A------------------------
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 58
s Tapirus_indicus.TapInd_scaffold_7432                      188323 13 +    199430 t-----c--------t-t--cc------ttta-----ttt
i Tapirus_indicus.TapInd_scaffold_7432                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102278 13 -    539355 t-----c--------t-t--cc------ttta-----ttt
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Theropithecus_gelada.CM009954.1                           349982 13 - 186847797 t-----t--------t-c--cc------ttta-----att
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476976  5 -    610378 ------------------------------ca-----ttt
i Tonatia_saurophila.TonSau_scaffold_294                 I 125 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17335  3 -     31044 a-----a--------a------------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 56
s Trachypithecus_auratus.k141_1189070                        17676 13 +     26378 t-----t--------t-c--cc------ttta-----att
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30358 13 -     78344 t-----t--------t-c--cc------ttta-----att
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       16997 13 +     25722 t-----t--------t-c--cc------ttta-----att
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25220 13 -     62838 t-----t--------t-c--cc------ttta-----att
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25337 13 +     46913 t-----t--------t-c--cc------ttta-----att
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6145 13 -     28527 t-----t--------t-c--cc------ttta-----att
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27159 13 -     64340 t-----t--------t-c--cc------ttta-----att
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25196 13 -     63452 t-----t--------t-c--cc------ttta-----att
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6639 13 +     22490 t-----t--------t-c--cc------ttta-----att
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                           68 13 -      6147 t-----t--------t-c--cc------ttta-----att
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7063 13 -     13050 t-----t--------t-c--cc------ttta-----att
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252300 13 -   6242583 t-----t--------t-c--cc------ttta-----att
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58031 13 +     59866 t-----t--------t-c--cc------ttta-----att
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830265 13 -   4065304 t-----c--------t-t--ct------gtta-----ttt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4817 13 -     70247 T-----C--------T-T--CC------ATTA-----TTT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104493 13 -    105689 A-----A--------A-A--AC------TTCG-----TTT
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178564 13 +   5085361 t-----c--------t-t--cc------ttta-----ttt
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_787544                                  22279 13 -     30710 t-----c--------t-t--cc------ttta-----ttt
i Varecia_rubra.k141_787544                              I 7 C 0
s Varecia_variegata.k141_289850                              21186 13 -    147434 t-----c--------t-t--cc------ttta-----ttt
i Varecia_variegata.k141_289850                          I 7 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                101997 13 -    112863 t-----c--------t-t--cc------ttta-----ttt
i Vulpes_lagopus.VulLag_flattened_line_12041             I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25838 13 -     86975 t-----c--------t-t--cc------ttta-----ttt
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tarsius_wallacei.k141_226975                                4353  0 +     20590 C
e Tarsius_lariang.k141_1780720                                4314  0 +      6850 C
e Tadarida_brasiliensis.TadBra_scaffold_231636                1206 496 +      3470 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Cephalopachus_bancanus.k141_72622                            791  0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Carlito_syrichta.NW_007259797.1                           267622  0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1375 3 +     36723 TTA
s Acinonyx_jubatus.LLWD01001279.1                           809786 3 +   1699592 ccg
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 5
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412053 3 +  29979442 caa
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 5
s Allenopithecus_nigroviridis.k141_3755588                   44663 3 +     53615 tta
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40486 3 +     44087 tta
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13190 3 -     21945 tta
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14868 3 +     32033 tta
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69421 2 -     84148 tt-
i Alouatta_belzebul.k141_1011583                         I 3 C 0
s Alouatta_caraya.k141_1109140                               41652 2 -     78289 tt-
i Alouatta_caraya.k141_1109140                           I 5 C 0
s Alouatta_discolor.k141_2561099                             41100 2 +     55831 tt-
i Alouatta_discolor.k141_2561099                         I 5 C 0
s Alouatta_juara.k141_1687208                                39538 2 -     64179 tt-
i Alouatta_juara.k141_1687208                            I 5 C 0
s Alouatta_macconnelli.k141_361275                           21184 2 -     24835 tt-
i Alouatta_macconnelli.k141_361275                       I 5 C 0
s Alouatta_nigerrima.k141_376068                             38167 2 +     45454 tt-
i Alouatta_nigerrima.k141_376068                         I 5 C 0
s Alouatta_palliata.k141_638677                              43866 2 +     70886 tt-
i Alouatta_palliata.k141_638677                          I 5 C 0
s Alouatta_puruensis.k141_251022                              5990 2 +     30854 tt-
i Alouatta_puruensis.k141_251022                         I 5 C 0
s Alouatta_seniculus.k141_928287                             30129 2 +     42133 tt-
i Alouatta_seniculus.k141_928287                         I 5 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      173946 3 -    412891 cta
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 233
s Aotus_azarae.k141_118258                                   47943 3 -     65372 tta
i Aotus_azarae.k141_118258                               I 5 C 0
s Aotus_griseimembra.k141_982342                             41688 3 +     43593 tta
i Aotus_griseimembra.k141_982342                         I 5 C 0
s Aotus_nancymaae.KZ198451.1                                669701 3 +   5030052 TTA
i Aotus_nancymaae.KZ198451.1                             I 5 C 0
s Aotus_trivirgatus.k141_192090                              21343 3 -     23494 tta
i Aotus_trivirgatus.k141_192090                          I 5 C 0
s Aotus_vociferans.k141_944972                                6479 3 +      8415 tta
i Aotus_vociferans.k141_944972                           I 5 C 0
s Arctocebus_calabarensis.k141_1364444                       16529 3 -     45910 caa
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2235 3 -     15198 CTA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 232
s Ateles_geoffroyi_b.tarseq_1536                               271928 2 +  21539123 tg-
i Ateles_geoffroyi_b.tarseq_1536                            I 5 C 0
s Ateles_belzebuth.k141_1572163                               8096 2 +     48076 tg-
i Ateles_belzebuth.k141_1572163                          I 5 C 0
s Ateles_chamek.k141_615173                                   3232 2 -     28759 tg-
i Ateles_chamek.k141_615173                              I 5 C 0
s Ateles_geoffroyi_a.k141_1283730                              30785 2 +     44353 tg-
i Ateles_geoffroyi_a.k141_1283730                          I 5 C 0
s Ateles_marginatus.k141_970259                              46157 2 -     71267 tg-
i Ateles_marginatus.k141_970259                          I 5 C 0
s Ateles_paniscus.k141_866194                                20216 2 -     33135 tg-
i Ateles_paniscus.k141_866194                            I 5 C 0
s Avahi_laniger.k141_2756659                                  3347 3 +     11645 caa
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3348 3 -     19611 caa
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5121 3 +     28062 tta
i Cacajao_ayresi.k141_96119                              I 5 C 0
s Cacajao_calvus.k141_89051                                  40415 3 -     91139 tta
i Cacajao_calvus.k141_89051                              I 5 C 0
s Cacajao_hosomi.k141_81245                                  17941 3 +     95584 tta
i Cacajao_hosomi.k141_81245                              I 5 C 0
s Cacajao_melanocephalus.k141_619699                         17854 3 +    119600 tta
i Cacajao_melanocephalus.k141_619699                     I 5 C 0
s Callibella_humilis.k141_1233062                             7345 3 +     18648 tta
i Callibella_humilis.k141_1233062                        I 5 C 0
s Callimico_goeldii.k141_1609886                              7029 3 -     13885 tta
i Callimico_goeldii.k141_1609886                         I 5 C 0
s Callithrix_geoffroyi.k119_473390                           15706 3 +     17162 tta
i Callithrix_geoffroyi.k119_473390                       I 5 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450661 3 + 189096842 TTA
i Callithrix_jacchus.pat_scaffold_3                      I 5 C 0
s Callithrix_kuhlii.k119_404482                              16954 3 -     18408 tta
i Callithrix_kuhlii.k119_404482                          I 5 C 0
s CanFam4.chr16                                           42502358 3 +  60362399 caa
i CanFam4.chr16                                          C 0 I 5
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5988 3 -     23171 caa
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 5
s Canis_lupus_dingo.QKWQ01000480.1                          219349 3 +   9314153 caa
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 5
s Canis_lupus_familiaris.chr16                            41612474 3 +  59632846 caa
i Canis_lupus_familiaris.chr16                           C 0 I 5
s Canis_lupus_orion.HG994398.1                            45104044 3 -  63665305 caa
i Canis_lupus_orion.HG994398.1                           C 0 I 5
s Carollia_perspicillata.CarPer_scaffold_170178               2313 3 +      5315 cta
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 226
s Cebuella_niveiventris.k141_592277                           2240 3 -     12580 tta
i Cebuella_niveiventris.k141_592277                      I 5 C 0
s Cebuella_pygmaea.k141_145798                               40126 3 +     53515 tta
i Cebuella_pygmaea.k141_145798                           I 5 C 0
s Cebus_albifrons.Contig27                                  368328 3 -  26074798 tta
i Cebus_albifrons.Contig27                               I 5 C 0
s Cebus_olivaceus.k141_1404781                                5217 3 -     34880 tta
i Cebus_olivaceus.k141_1404781                           I 5 C 0
s Cebus_unicolor.k141_1654760                                64312 3 -     89041 tta
i Cebus_unicolor.k141_1654760                            I 5 C 0
s Ceratotherium_simum.JH767749.1                          15489303 2 -  27778364 cg-
i Ceratotherium_simum.JH767749.1                         C 0 I 5
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16136 2 +     27315 cg-
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 5
s Cercocebus_atys.KQ010504.1                                137825 3 -   4669795 tta
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41565 3 +     47900 tta
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41398 3 -     44860 tta
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41381 3 -    148725 tta
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24444 3 -     40656 tta
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4380 3 +     20796 tta
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8636 3 -     17524 tta
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24324 3 -     34525 tta
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9034 3 -     25376 tta
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361600 3 -  39242232 tta
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267344 3 +  21565898 tta
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28800 3 -     45857 tta
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24589 3 -     32606 tta
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          775 3 +      8499 tta
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22293 3 +     70610 tta
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19153 3 +     36323 tta
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             27774 3 -     33796 caa
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1961 3 -     15404 caa
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6215 3 -     32913 tta
i Cheracebus_lucifer.k141_2312002                        I 5 C 0
s Cheracebus_lugens.k141_1179667                             16628 3 -     40346 tta
i Cheracebus_lugens.k141_1179667                         I 5 C 0
s Cheracebus_regulus.k141_471822                             16892 3 +    216457 tta
i Cheracebus_regulus.k141_471822                         I 5 C 0
s Cheracebus_torquatus.k141_890198                           16676 3 +     39636 tta
i Cheracebus_torquatus.k141_890198                       I 5 C 0
s Chiropotes_albinasus.k141_1946120                           1076 3 +      5346 tta
i Chiropotes_albinasus.k141_1946120                      I 5 C 0
s Chiropotes_israelita.k141_313004                           39761 3 -    112038 tta
i Chiropotes_israelita.k141_313004                       I 5 C 0
s Chiropotes_sagulatus.k141_1113111                           5333 3 +     34062 tta
i Chiropotes_sagulatus.k141_1113111                      I 5 C 0
s Chlorocebus_aethiops.ctg25                                340049 3 +  18827391 tta
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6660 3 -     44032 tta
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301375 3 - 135778131 tta
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405940 2 -   2368649 tt-
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375103 2 - 200372422 tt-
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5827 2 -      6605 tt-
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804538 3 +  53390261 tag
i Condylura_cristata.JH655891.1                          C 0 I 5
s Craseonycteris_thonglongyai.CraTho_scaffold_101005         10393 3 +     10921 TAA
i Craseonycteris_thonglongyai.CraTho_scaffold_101005     C 0 N 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1024 3 +     87169 caa
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 5
s Daubentonia_madagascariensis.ctg71                        289789 2 +  12879189 c-a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11861979 3 -  20541912 cta
i Desmodus_rotundus.KZ672289.1                           C 0 I 230
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661587 2 -   1390856 ca-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 5
s Diceros_bicornis.DicBicMic_scaffold_5955                  136380 2 -    198055 cg-
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 5
s Echinops_telfairi.JH980293.1                            62850791 3 - 111700974 CAA
i Echinops_telfairi.JH980293.1                           I 6 C 0
s Eidolon_helvum.AWHC01266696.1                               3430 3 +     19438 tta
i Eidolon_helvum.AWHC01266696.1                          C 0 I 346
s Elephantulus_edwardii.JH947257.1                         9105027 3 -  10337057 aag
i Elephantulus_edwardii.JH947257.1                       I 159 C 0
s Enhydra_lutris.KZ291758.1                               24913092 3 +  41312741 caa
i Enhydra_lutris.KZ291758.1                              C 0 I 5
s Equus_asinus.JREZ01000139.1                              3038569 2 -   4378816 ta-
i Equus_asinus.JREZ01000139.1                            C 0 I 5
s Equus_caballus.CM000403.2                               21372503 2 +  39960074 ca-
i Equus_caballus.CM000403.2                              C 0 I 5
s Equus_przewalskii.KK951119.1                              409289 2 -    498745 ca-
i Equus_przewalskii.KK951119.1                           C 0 I 5
s Erythrocebus_patas.Contig38                               259607 3 +  21539334 tta
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243451 3 - 206538554 cag
i Felis_catus.CM001381.2                                 C 0 I 5
s Felis_catus_fca126.CM031415.1                          185113233 3 - 205367284 cag
i Felis_catus_fca126.CM031415.1                          C 0 I 5
s Felis_nigripes.FelNig_flattened_line_31944                 24581 3 -     30238 cag
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 5
s Galago_moholi.ctg3793                                     120605 3 -    137831 caa
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4146 3 +     22493 caa
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17621 3 +     32986 CAA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16201 3 +     18121 cca
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 8
s Gorilla_beringei.k141_3358147                               1738 3 -      8343 tta
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251228 3 - 186649187 tta
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27558 3 -    327341 caa
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 5
s Hipposideros_armiger.JXIK01000431.1                      1547324 3 -   1711038 taa
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 339
s Hipposideros_galeritus.HipGal_scaffold_23202               46641 3 +     49977 taa
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 339
s Hoolock_leuconedys.ctg274                                    139122 3 -    630532 tta
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66016 1 +     83186 --g
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 5
s Hylobates_agilis.k141_1155965                               2156 3 +     12352 tta
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9339 3 +     55766 tta
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048677 3 + 191637585 tta
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798009 3 +  11177569 tta
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     840 3 -      1527 caa
i Indri_indri.k141_4600452                               I 12 C 0
s Lagothrix_lagothricha.k141_246028                          40474 2 +    110728 tg-
i Lagothrix_lagothricha.k141_246028                      I 5 C 0
s Leontocebus_fuscicollis.k141_2994775                        1156 3 -     13097 tta
i Leontocebus_fuscicollis.k141_2994775                   I 5 C 0
s Leontocebus_illigeri.k141_2951200                           1107 3 +      5940 TTA
i Leontocebus_illigeri.k141_2951200                      I 5 C 0
s Leontocebus_nigricollis.k141_3905062                         738 3 -      5717 tta
i Leontocebus_nigricollis.k141_3905062                   I 5 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7377 3 -     11567 tta
i Leontopithecus_chrysomelas.k141_1327670                I 5 C 0
s Leontopithecus_rosalia.k141_349454                          8758 3 -     12945 tta
i Leontopithecus_rosalia.k141_349454                     I 5 C 0
s Lepilemur_ankaranensis.k141_567626                          6134 3 +     29618 caa
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6131 3 +     31569 caa
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6143 3 +     24756 caa
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6135 3 +     16388 caa
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810448 3 -   3914936 caa
i Leptonychotes_weddellii.KB714746.1                     C 0 I 5
s Lophocebus_aterrimus.ctg367                               329781 3 -   1826925 tta
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                41611629 3 +  59628241 caa
i Lycaon_pictus.CM007581.1                               C 0 I 5
s Macaca_arctoides.k141_1757516                              42063 3 -     61512 tta
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369691 3 -  60120075 tta
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22011 3 +     30207 tta
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19114 3 -     24934 tta
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21897 3 +     30527 tta
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33087 3 -     50087 tta
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42825 3 +     51645 tta
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411399 3 - 187317192 tta
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396282 3 +  25927173 tta
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45413 3 -     62418 tta
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22101 3 +     24253 tta
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41858 3 +     59329 tta
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267690 3 +    668171 tta
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19036 3 +     21031 tta
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32769 3 +     33478 tta
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220391 3 -    270270 TTA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 347
s Mandrillus_leucophaeus.scaffold280                        319166 3 +  24302211 tta
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               353998 3 -    752769 tta
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670663 3 -    737560 caa
i Manis_javanica.JSZB01003497.1                          C 0 I 5
s Manis_pentadactyla.KN006162.1                             217955 3 +    317179 caa
i Manis_pentadactyla.KN006162.1                          C 0 I 5
s Megaderma_lyra.MegLyr_scaffold_4542                       147571 3 +    207569 taa
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 348
s Mellivora_capensis.MelCap_flattened_line_19308             22961 3 -     74585 cag
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 5
s Mico_argentatus.k141_582562                                 7128 3 +     17804 tta
i Mico_argentatus.k141_582562                            I 5 C 0
s Mico_humeralifer.k141_1180625                               7901 3 -     12984 tta
i Mico_humeralifer.k141_1180625                          I 5 C 0
s Mico_schneideri.k141_1877700                                     15863 3 -     26561 tta
i Mico_schneideri.k141_1877700                                 I 5 C 0
s Microcebus_murinus.CM007674.1                           74981743 3 +  93316391 taa
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41109 3 +    145209 caa
i Microgale_talazaci.MicTal_scaffold_6613                I 6 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                181921 3 +    200668 cta
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 233
s Miopithecus_ogouensis.k141_1534655                         19158 3 -     27822 tta
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5457 3 +     27589 caa
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 5
s Mirza_zaza.k141_766280                                     49601 3 -     62432 taa
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176098 3 +    366855 cca
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 233
s Mungos_mungo.MunMun_flattened_line_18455                   15312 3 -     63510 caa
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 5
s Mustela_putorius.JH418006.1                             14351896 3 +  14710649 caa
i Mustela_putorius.JH418006.1                            C 0 I 5
s Nasalis_larvatus.k141_1350636                              25474 2 +     34575 tt-
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465843 3 -  31847680 caa
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 5
s Noctilio_leporinus.NocLep_scaffold_7894                   124755 3 -    149072 cta
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 231
s Nomascus_annamensis.k141_1771965                           50418 3 -    132029 tta
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6514 3 -     16345 tta
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12398 3 +     22201 tta
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410734 3 -  22158432 tta
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22797 3 -     54323 tta
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195244 3 +   9404916 caa
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 5
s Nycticebus_bengalensis.LG01                             93631875 3 + 196305487 caa
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1264 3 +      2758 caa
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560129 3 - 199412804 caa
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448630 3 +   2017862 caa
i Odobenus_rosmarus.KB229312.1                           C 0 I 5
s Orycteropus_afer.OryAfe_flattened_line_171931              10535 3 -     14239 aaa
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36292 3 +    559221 caa
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 7
s Otolemur_crassicaudatus.k141_649260                        35736 3 -     51505 caa
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             348751 3 +   1103335 CAA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468617 3 - 189151597 tta
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21171 3 -    230217 cag
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 5
s Panthera_pardus.KV860321.1                              18458497 3 -  18783137 cag
i Panthera_pardus.KV860321.1                             C 0 I 5
s Panthera_tigris.KE722367.1                               3969222 3 +   8748460 cag
i Panthera_tigris.KE722367.1                             C 0 I 5
s Papio_anubis.CM001495.2                                   240009 3 - 183742232 tta
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6475 3 +     21308 tta
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287512 3 -  20919399 tta
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19128 3 -     27687 tta
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12264 3 +     16796 tta
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19074 3 -     23640 tta
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12085 3 +     78924 caa
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 5
s Perodicticus_ibeanus.k141_1921260                          21973 3 +     31479 caa
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14343 3 -     24908 caa
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5931 2 +      7560 tt-
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61638 2 -     63152 tt-
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44237 2 +     45295 tt-
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1916 2 +      5735 tt-
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62111 3 +    207309 tta
i Pithecia_albicans.k141_1239476                         I 5 C 0
s Pithecia_chrysocephala.k141_785207                          3231 3 -     25401 tta
i Pithecia_chrysocephala.k141_785207                     I 5 C 0
s Pithecia_hirsuta.k141_640380                               28946 3 +     58159 tta
i Pithecia_hirsuta.k141_640380                           I 5 C 0
s Pithecia_mittermeieri.k141_1280039                         29222 3 +     63561 tta
i Pithecia_mittermeieri.k141_1280039                     I 5 C 0
s Pithecia_pissinattii.k141_878371                           28985 3 +     51148 tta
i Pithecia_pissinattii.k141_878371                       I 5 C 0
s Pithecia_pithecia.tarseq_165                              553978 3 -   4542175 tta
i Pithecia_pithecia.tarseq_165                           I 5 C 0
s Pithecia_vanzolinii.k141_1369553                           28969 3 +     51125 tta
i Pithecia_vanzolinii.k141_1369553                       I 5 C 0
s Plecturocebus_bernhardi.k141_2549090                        5389 3 +     39866 tta
i Plecturocebus_bernhardi.k141_2549090                   I 5 C 0
s Plecturocebus_brunneus.k141_862875                           476 3 -      9282 tta
i Plecturocebus_brunneus.k141_862875                     I 5 C 0
s Plecturocebus_caligatus.k141_1382851                       39877 3 -     87950 tta
i Plecturocebus_caligatus.k141_1382851                   I 5 C 0
s Plecturocebus_cinerascens.k141_1164729                     40270 3 -     88961 tta
i Plecturocebus_cinerascens.k141_1164729                 I 5 C 0
s Plecturocebus_cupreus.k141_2351393                          4969 3 -     39403 tta
i Plecturocebus_cupreus.k141_2351393                     I 5 C 0
s Plecturocebus_dubius.k141_1058799                          39923 3 +     87928 tta
i Plecturocebus_dubius.k141_1058799                      I 5 C 0
s Plecturocebus_grovesi.k141_2013005                          4967 3 -     60166 tta
i Plecturocebus_grovesi.k141_2013005                     I 5 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11903 3 -     67232 tta
i Plecturocebus_hoffmannsi.k141_3303950                  I 5 C 0
s Plecturocebus_miltoni.k141_349282                          39819 3 -     90634 tta
i Plecturocebus_miltoni.k141_349282                      I 5 C 0
s Plecturocebus_moloch.k141_1031110                          41287 3 +     89403 tta
i Plecturocebus_moloch.k141_1031110                      I 5 C 0
s Pongo_abelii.CM009266.2                                   174240 3 - 189387572 tta
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189238 3 -   9816681 tta
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24415 2 +     69807 tt-
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41610 2 -     80239 tt-
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563223 3 -   2598838 cga
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            860 3 -      7103 cga
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1457 3 -     11706 tga
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5192 3 -     30655 tga
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31517 3 +     46564 cga
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91788 3 -     98465 cga
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5427 3 +     35169 cga
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49166 3 -     66298 ctg
i Pteronotus_parnellii.KE847780.1                        C 0 I 229
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1683 3 -     18639 caa
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 5
s Pteropus_alecto.KB030862.1                               5838022 3 -  28871421 tta
i Pteropus_alecto.KB030862.1                             C 0 I 346
s Pteropus_vampyrus.KN525825.1                             3534583 3 -   4952924 tta
i Pteropus_vampyrus.KN525825.1                           C 0 I 346
s Puma_concolor.QAVW01001104.1                            18096048 3 +  38429054 cag
i Puma_concolor.QAVW01001104.1                           C 0 I 5
s Pygathrix_cinerea.k141_1153803                             23806 2 +     91421 tt-
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150299 2 -   7812017 tt-
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4676 2 +     72585 tt-
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2910655 3 +   3329780 taa
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 356
s Rhinopithecus_bieti.k119_221883                            25636 2 +     27361 tt-
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118984 2 + 195417433 tt-
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233244 2 -   7961872 tt-
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72031 3 -    116970 taa
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 346
s Saguinus_bicolor.k141_1429097                               1074 3 +     27962 tta
i Saguinus_bicolor.k141_1429097                          I 5 C 0
s Saguinus_geoffroyi.k141_3779887                             1079 3 +      6077 tta
i Saguinus_geoffroyi.k141_3779887                        I 5 C 0
s Saguinus_imperator.k141_1898058                             1100 3 +      5971 tta
i Saguinus_imperator.k141_1898058                        I 5 C 0
s Saguinus_inustus.k141_2469308                               1155 3 +      5932 TTA
i Saguinus_inustus.k141_2469308                          I 5 C 0
s Saguinus_labiatus.k141_1571581                              1301 3 -      2099 tta
i Saguinus_labiatus.k141_1571581                         I 5 C 0
s Saguinus_midas.LG03                                       388332 3 - 209938924 tta
i Saguinus_midas.LG03                                    I 5 C 0
s Saguinus_mystax.k141_8077960                                1102 3 +      5979 TTA
i Saguinus_mystax.k141_8077960                           I 5 C 0
s Saguinus_oedipus.k141_1466288                               1478 3 -      4301 tta
i Saguinus_oedipus.k141_1466288                          I 5 C 0
s Sapajus_apella.ctg103                                     235551 3 +   5703754 tta
i Sapajus_apella.ctg103                                  I 5 C 0
s Sapajus_macrocephalus.k141_796559                           5141 3 +     21866 tta
i Sapajus_macrocephalus.k141_796559                      I 5 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113276 3 +    313613 cag
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 5
s Semnopithecus_entellus.k141_158471                         22123 2 +     27374 tt-
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25642 2 +     58920 tt-
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12138 2 -     45317 tt-
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19796 2 -     42441 tt-
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22476 2 -     29113 tt-
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25545 2 -     48123 tt-
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855943 3 -   1910179 taa
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 5
s Spilogale_gracilis.SpiGra_flattened_line_13525              3689 3 -     97271 cag
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 5
s Suricata_suricatta.SurSur_flattened_line_6629             121719 2 +    196729 c-a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 5
s Symphalangus_syndactylus.tarseq_199                       387705 3 +   1523678 tta
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188336 3 +    199430 caa
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 5
s Tapirus_terrestris.TapTer_scaffold_755                    102291 3 -    539355 cag
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 5
s Theropithecus_gelada.CM009954.1                           349995 3 - 186847797 tta
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    476981 3 -    610378 cta
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 234
s Trachypithecus_auratus.k141_1189070                        17689 2 +     26378 tt-
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30371 2 -     78344 tt-
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17010 2 +     25722 tt-
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25233 2 -     62838 tt-
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25350 2 +     46913 tt-
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6158 2 -     28527 tt-
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27172 2 -     64340 tt-
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25209 2 -     63452 tt-
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6652 2 +     22490 tt-
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                           81 2 -      6147 tt-
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7076 2 -     13050 tt-
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252313 2 -   6242583 tt-
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58044 2 +     59866 tt-
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830278 3 -   4065304 aaa
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4830 3 -     70247 AAA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104506 3 -    105689 CAA
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 5
s Ursus_maritimus.KK499267.1                                178577 3 +   5085361 caa
i Ursus_maritimus.KK499267.1                             C 0 I 5
s Varecia_rubra.k141_787544                                  22292 3 -     30710 caa
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21199 3 -    147434 caa
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102010 3 -    112863 caa
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 5
s Zalophus_californianus.ZalCal_flattened_line_17732         25851 3 -     86975 caa
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 5
e Loris_tardigradus.ctg83                                  5036753 3543 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            3094 3543 +     19643 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17338 56 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107666 50 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10335 52 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tarsius_wallacei.k141_226975                                4353 0 +     20590 C
e Tarsius_lariang.k141_1780720                                4314 0 +      6850 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 219 58 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_231636                1206 496 +      3470 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117101 58 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Cephalopachus_bancanus.k141_72622                            791 0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Carlito_syrichta.NW_007259797.1                           267622 0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1378 12 +     36723 CTG-T--AT-----TTAC-TT
s Acinonyx_jubatus.LLWD01001279.1                           809794  8 +   1699592 ttt-t--at-----tt-----
i Acinonyx_jubatus.LLWD01001279.1                        I 5 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412061  8 +  29979442 ttt-c--at-----tt-----
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 5 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44666 12 +     53615 ctt-t--at-----ttac-tt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40489 12 +     44087 ctt-t--at-----ttac-tt
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13193 12 -     21945 ctt-t--at-----ttac-tt
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14871 12 +     32033 ctt-t--at-----ttac-tt
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69423  9 -     84148 ----a--ct-----ttac-tt
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41654  9 -     78289 ----a--ct-----ttac-tt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41102  9 +     55831 ----a--ct-----ttac-tt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39540  9 -     64179 ----a--ct-----ttac-tt
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21186  9 -     24835 ----a--ct-----ttac-tt
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38169  9 +     45454 ----a--ct-----ttac-tt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43868  9 +     70886 ----a--ct-----ttac-tt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              5992  9 +     30854 ----a--ct-----ttac-tt
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30131  9 +     42133 ----a--ct-----ttac-tt
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174182  9 -    412891 ctt-t-ttt-----ta-----
i Anoura_caudifer.AnoCau_scaffold_1412                   I 233 I 4
s Aotus_azarae.k141_118258                                   47946 12 -     65372 ctt-t--at-----ttac-tt
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41691 12 +     43593 ctt-t--at-----ttac-tt
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669704 12 +   5030052 CTT-T--AT-----TTac-tt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21346 12 -     23494 ctt-t--at-----ttac-tt
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6482 12 +      8415 cta-t--at-----ttac-tt
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16532 12 -     45910 ttt-a--at-----ttga-tt
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2470  8 -     15198 ctt-t--tt-----tt-----
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 232 I 4
s Ateles_geoffroyi_b.tarseq_1536                               271930  9 +  21539123 ----t--at-----ttat-tt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8098  9 +     48076 ----t--at-----ttac-tt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3234  9 -     28759 ----t--at-----ttat-tt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30787  9 +     44353 ----t--at-----ttat-tt
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46159  9 -     71267 ----t--at-----ttac-tt
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20218  9 -     33135 ----t--at-----ttat-tt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3350 12 +     11645 ttt-c--gt-----ttta-tt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3351 12 -     19611 ttt-c--at-----ttta-tt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5124 12 +     28062 ctt-t--at-----ttac-tt
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40418 12 -     91139 ctt-t--at-----ttac-tt
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17944 12 +     95584 ctt-t--at-----ttac-tt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17857 12 +    119600 ctt-t--at-----ttac-tt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7348 11 +     18648 ctt-t---t-----ttac-tt
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7032  9 -     13885 ctt-t---t-----ttac---
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15709 11 +     17162 ctt-t---t-----ttac-tt
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450664 11 + 189096842 CTT-T---T-----TTAC-TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16957 11 -     18408 ctt-t---t-----ttac-tt
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502366  8 +  60362399 ttt-c--at-----tt-----
i CanFam4.chr16                                          I 5 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     5996  8 -     23171 ttt-c--at-----tt-----
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 5 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219357  8 +   9314153 ttt-c--at-----tt-----
i Canis_lupus_dingo.QKWQ01000480.1                       I 5 C 0
s Canis_lupus_familiaris.chr16                            41612482  8 +  59632846 ttt-c--at-----tt-----
i Canis_lupus_familiaris.chr16                           I 5 C 0
s Canis_lupus_orion.HG994398.1                            45104052  8 -  63665305 ttt-c--at-----tt-----
i Canis_lupus_orion.HG994398.1                           I 5 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2542  8 +      5315 CTT-T--TT-----TA-----
i Carollia_perspicillata.CarPer_scaffold_170178          I 226 I 4
s Cebuella_niveiventris.k141_592277                           2243 11 -     12580 ctt-t---t-----ttac-tt
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40129 11 +     53515 ctt-t---t-----ttac-tt
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368331 12 -  26074798 ctt-t--at-----ttac-tt
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5220 12 -     34880 ctt-t--at-----ttac-tt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64315 12 -     89041 ctt-t--at-----ttac-tt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489310  8 -  27778364 ttt-t--at-----tt-----
i Ceratotherium_simum.JH767749.1                         I 5 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16143  8 +     27315 ttt-t--at-----tt-----
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 5 C 0
s Cercocebus_atys.KQ010504.1                                137828 12 -   4669795 ctt-t--at-----ttac-tt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41568 12 +     47900 ctt-t--at-----ttac-tt
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41401 12 -     44860 ctt-t--at-----ttac-tt
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41384 12 -    148725 ctt-t--at-----ttac-tt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24447 12 -     40656 ctt-t--at-----ttac-tt
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4383 12 +     20796 ctt-t--at-----ttac-tt
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8639 12 -     17524 ctt-t--at-----ttac-tt
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24327 12 -     34525 ctt-t--at-----ttac-tt
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9037 12 -     25376 ctt-t--at-----ttac-tt
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361603 12 -  39242232 ctt-t--at-----ttac-tt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267347 12 +  21565898 ctt-t--at-----ttac-tt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28803 12 -     45857 ctt-t--at-----ttac-tt
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24592 12 -     32606 ctt-t--at-----ttac-tt
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          778 12 +      8499 ctt-t--at-----ttac-tt
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22296 12 +     70610 ctt-t--at-----ttac-tt
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19156 12 +     36323 ctt-t--at-----ttac-tt
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             27777 12 -     33796 ttt-c--at-----ttta-tt
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1964 12 -     15404 ttt-c--at-----ttta-tt
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6218 12 -     32913 ctt-t--at-----ttac-tt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16631 12 -     40346 ctt-t--at-----ttac-tt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16895 12 +    216457 ctt-t--at-----ttac-tt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16679 12 +     39636 ctt-t--at-----ttac-tt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1079 12 +      5346 ctt-t--at-----ttcc-tt
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39764 12 -    112038 ctt-t--at-----ttac-tt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5336 12 +     34062 ctt-t--at-----ttac-tt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340052 12 +  18827391 ctt-t--at-----ttac-tt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6663 12 -     44032 ctt-t--at-----ttac-tt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301378 12 - 135778131 ctt-t--at-----ttac-tt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405942  4 -   2368649 ----------------ac-tt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375105  4 - 200372422 ----------------ac-tt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5829  4 -      6605 ----------------ac-tt
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804546  8 +  53390261 ttt-t--gt-----tc-----
i Condylura_cristata.JH655891.1                          I 5 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           220  8 -      8242 TTT-T--CT-----TT-----
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     N 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1032  8 +     87169 ttt-t--at-----tt-----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 5 I 1
s Daubentonia_madagascariensis.ctg71                        289791  5 +  12879189 att-t--a-------------
i Daubentonia_madagascariensis.ctg71                     C 0 I 2
s Desmodus_rotundus.KZ672289.1                            11862212  8 -  20541912 ctt-t--tt-----ta-----
i Desmodus_rotundus.KZ672289.1                           I 230 I 6
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661594  8 -   1390856 ttt-t--at-----tt-----
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 5 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136387  8 -    198055 ttt-t--at-----tt-----
i Diceros_bicornis.DicBicMic_scaffold_5955               I 5 C 0
s Echinops_telfairi.JH980293.1                            62850794  8 - 111700974 TTC-T--AC-----TT-----
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               3779  8 +     19438 ttt-t--ct-----tt-----
i Eidolon_helvum.AWHC01266696.1                          I 346 I 4
s Elephantulus_edwardii.JH947257.1                         9105030  8 -  10337057 tgt-t--ct-----gt-----
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913100  8 +  41312741 t-ttc--at-----tt-----
i Enhydra_lutris.KZ291758.1                              I 5 C 0
s Equus_asinus.JREZ01000139.1                              3038576  8 -   4378816 ttt-t--at-----tt-----
i Equus_asinus.JREZ01000139.1                            I 5 C 0
s Equus_caballus.CM000403.2                               21372510  8 +  39960074 ttt-t--at-----tt-----
i Equus_caballus.CM000403.2                              I 5 C 0
s Equus_przewalskii.KK951119.1                              409296  8 -    498745 ttt-t--at-----tt-----
i Equus_przewalskii.KK951119.1                           I 5 C 0
s Erythrocebus_patas.Contig38                               259610 12 +  21539334 ctt-t--at-----ttac-tt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243459  8 - 206538554 ttt-t--at-----tt-----
i Felis_catus.CM001381.2                                 I 5 C 0
s Felis_catus_fca126.CM031415.1                          185113241  8 - 205367284 ttt-t--at-----tt-----
i Felis_catus_fca126.CM031415.1                          I 5 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24589  8 -     30238 ttt-t--at-----tt-----
i Felis_nigripes.FelNig_flattened_line_31944             I 5 C 0
s Galago_moholi.ctg3793                                     120608 12 -    137831 tgt-a--at-----ttga-tt
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4149 12 +     22493 tgt-a--at-----ttga-tt
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17624 12 +     32986 TGT-A--AT-----TTGA-TT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               4058  8 +      5976 TTT-T--AT-----TT-----
i Galeopterus_variegatus.GalVar_scaffold_132127          I 126 I 68
s Gorilla_beringei.k141_3358147                               1741 12 -      8343 ctg-t--at-----ttac-tt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251231 12 - 186649187 ctg-t--at-----ttac-tt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27566  8 -    327341 ttt-t--at-----tt-----
i Helogale_parvula.HelPar_flattened_line_2585            I 5 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547666  8 -   1711038 ttt-t--ct-----tt-----
i Hipposideros_armiger.JXIK01000431.1                    I 339 I 4
s Hipposideros_galeritus.HipGal_scaffold_23202               46983  8 +     49977 ctt-t--ct-----tt-----
i Hipposideros_galeritus.HipGal_scaffold_23202           I 339 I 4
s Hoolock_leuconedys.ctg274                                    139125 12 -    630532 ctt-t--at-----ttac-tt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66022  8 +     83186 ttt-t--ct-----tt-----
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 5 C 0
s Hylobates_agilis.k141_1155965                               2159 12 +     12352 ctt-t--at-----ttac-tt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9342 12 +     55766 ctt-t--at-----ttac-tt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048680 12 + 191637585 ctt-t--at-----ttac-tt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798012 12 +  11177569 ctt-t--at-----ttac-tt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     843 12 -      1527 ttt-c--at-----ttta-tt
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40476  9 +    110728 ----t--at-----ttac-tt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1159 12 -     13097 ctt-t-a-t-----ttac-tt
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1110 12 +      5940 CTT-T-A-T-----TTAC-TT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         741 12 -      5717 ctt-t-a-t-----ttac-tt
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7380 12 -     11567 ctt-t--at-----tcac-tt
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8761 12 -     12945 ctt-t--at-----tcac-tt
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6137 12 +     29618 ttt-c--at-----ttta-tt
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6134 12 +     31569 ttt-c--at-----ttta-tt
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6146 12 +     24756 ttt-c--at-----ttta-tt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6138 12 +     16388 ttt-c--at-----ttta-tt
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810456  8 -   3914936 ttt-c--at-----tt-----
i Leptonychotes_weddellii.KB714746.1                     I 5 C 0
s Lophocebus_aterrimus.ctg367                               329784 12 -   1826925 ctt-t--at-----ttac-tt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                41611637  8 +  59628241 ttt-c--at-----tt-----
i Lycaon_pictus.CM007581.1                               I 5 C 0
s Macaca_arctoides.k141_1757516                              42066 12 -     61512 ctt-t--at-----ttac-tt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369694 12 -  60120075 ctt-t--at-----ttac-tt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22014 12 +     30207 ctt-t--at-----ttac-tt
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19117 12 -     24934 ctt-t--at-----ttac-tt
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21900 12 +     30527 ctt-t--at-----ttac-tt
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33090 12 -     50087 ctt-t--at-----ttac-tt
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42828 12 +     51645 ctt-t--at-----ttac-tt
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411402 12 - 187317192 ctt-t--at-----ttac-tt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396285 12 +  25927173 ctt-t--at-----ttac-tt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45416 12 -     62418 ctt-t--at-----ttac-tt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22104 12 +     24253 ctt-t--at-----ttac-tt
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41861 12 +     59329 ctt-t--at-----ttac-tt
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267693 12 +    668171 ctt-t--at-----ttac-tt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19039 12 +     21031 ctt-t--at-----ttac-tt
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32772 12 +     33478 ctt-t--at-----ttac-tt
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220741  8 -    270270 ttt-t--ct-----tt-----
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 347 I 4
s Mandrillus_leucophaeus.scaffold280                        319169 12 +  24302211 ctt-t--at-----ttac-tt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354001 12 -    752769 ctt-t--at-----ttac-tt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670671  8 -    737560 ttt-t--at-----tt-----
i Manis_javanica.JSZB01003497.1                          I 5 C 0
s Manis_pentadactyla.KN006162.1                             217963  8 +    317179 ttt-t--at-----tt-----
i Manis_pentadactyla.KN006162.1                          I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       147922  8 +    207569 ttt-t--ct-----tt-----
i Megaderma_lyra.MegLyr_scaffold_4542                    I 348 I 4
s Mellivora_capensis.MelCap_flattened_line_19308             22969  8 -     74585 t-ttc--at-----tt-----
i Mellivora_capensis.MelCap_flattened_line_19308         I 5 C 0
s Mico_argentatus.k141_582562                                 7131  3 +     17804 ctt------------------
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7904 11 -     12984 cct-t---t-----ttac-tt
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15866  3 -     26561 ctt------------------
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981746 12 +  93316391 ttt-c--at-----ttta-tt
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41112  8 +    145209 ttc-t--ac-----tt-----
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182157  8 +    200668 ctt-t--tt-----ta-----
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 233 I 4
s Miopithecus_ogouensis.k141_1534655                         19161 12 -     27822 ctt-t--at-----ttac-tt
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5465  8 +     27589 ttt-c--at-----tt-----
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 5 C 0
s Mirza_zaza.k141_766280                                     49604 12 -     62432 ttt-c--at-----ttta-tt
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176334  8 +    366855 ctt-t--tt-----cc-----
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 233 I 4
s Mungos_mungo.MunMun_flattened_line_18455                   15320  8 -     63510 ttt-t--at-----tt-----
i Mungos_mungo.MunMun_flattened_line_18455               I 5 C 0
s Mustela_putorius.JH418006.1                             14351904  8 +  14710649 t-ttc--at-----tt-----
i Mustela_putorius.JH418006.1                            I 5 C 0
s Nasalis_larvatus.k141_1350636                              25476  4 +     34575 ----------------ac-tt
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465851  8 -  31847680 ttt-c--at-----tt-----
i Neomonachus_schauinslandi.NINY01007730.1               I 5 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   124989  8 -    149072 CTT-T--TC-----TA-----
i Noctilio_leporinus.NocLep_scaffold_7894                I 231 C 0
s Nomascus_annamensis.k141_1771965                           50421 12 -    132029 ctt-t--at-----ttac-tt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6517 12 -     16345 ctt-t--at-----ttac-tt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12401 12 +     22201 ctt-t--at-----ttac-tt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410737 12 -  22158432 ctt-t--at-----ttac-tt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22800 12 -     54323 ctt-t--at-----ttac-tt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195252  8 +   9404916 ttt-c--at-----tt-----
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 5 C 0
s Nycticebus_bengalensis.LG01                             93631878 12 + 196305487 ttt-a--at-----ttga-tt
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1267 12 +      2758 ttt-a--at-----ttga-tt
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560132 12 - 199412804 ttt-a--at-----ttga-tt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448638  8 +   2017862 ttt-c--at-----tt-----
i Odobenus_rosmarus.KB229312.1                           I 5 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              10538  8 -     14239 ttt-t--gt-----tt-----
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36302  1 +    559221 ---------------t-----
i Otocyon_megalotis.JAEUCK010005147.1                    I 7 C 0
s Otolemur_crassicaudatus.k141_649260                        35739 12 -     51505 tgt-a--at-----ttga-tt
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             348754 12 +   1103335 TGT-A--AT-----TTGa-tt
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468620 12 - 189151597 ctg-t--at-----ttac-tt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21179  8 -    230217 ttt-t--at-----tt-----
i Panthera_onca.PanOnc_flattened_line_3271               I 5 C 0
s Panthera_pardus.KV860321.1                              18458505  8 -  18783137 ttt-t--at-----tt-----
i Panthera_pardus.KV860321.1                             I 5 C 0
s Panthera_tigris.KE722367.1                               3969230  8 +   8748460 ttt-t--at-----tt-----
i Panthera_tigris.KE722367.1                             I 5 C 0
s Papio_anubis.CM001495.2                                   240012 12 - 183742232 ctt-t--at-----ttac-tt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6478 12 +     21308 ctt-t--at-----ttac-tt
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287515 12 -  20919399 ctt-t--at-----ttac-tt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19131 12 -     27687 ctt-t--at-----ttac-tt
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12267 12 +     16796 ctt-t--at-----ttac-tt
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19077 12 -     23640 ctt-t--at-----ttac-tt
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12093  8 +     78924 ttt-t--at-----tt-----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 5 C 0
s Perodicticus_ibeanus.k141_1921260                          21976 12 +     31479 ttt-a--at-----ttga-tt
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14346 12 -     24908 ttt-a--at-----ttga-tt
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5933  4 +      7560 ----------------ac-tt
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61640  4 -     63152 ----------------ac-tt
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44239  4 +     45295 ----------------ac-tt
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1918  4 +      5735 ----------------ac-tt
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62114 12 +    207309 ctt-t--at-----ttac-tt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3234 12 -     25401 ctt-t--at-----ttac-tt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28949 12 +     58159 ctt-t--at-----ttac-tt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29225 12 +     63561 ctt-t--at-----ttac-tt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           28988 12 +     51148 ctt-t--at-----ttac-tt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553981 12 -   4542175 ctt-t--at-----ttac-tt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28972 12 +     51125 ctt-t--at-----ttac-tt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5392 12 +     39866 ctt-t--at-----ttac-tt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           479 12 -      9282 ctt-t--at-----ttac-tt
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39880 12 -     87950 ctt-t--at-----ttac-tt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40273 12 -     88961 ctt-t--at-----ttac-tt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4972 12 -     39403 ctt-t--at-----ttac-tt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39926 12 +     87928 ctt-t--at-----ttac-tt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4970 12 -     60166 ctt-t--at-----ttac-tt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11906 12 -     67232 ctt-t--at-----ttac-tt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39822 12 -     90634 ctt-t--at-----ttac-tt
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41290 12 +     89403 ctt-t--at-----ttac-tt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174243 12 - 189387572 ctt-t--at-----ttac-tt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189241 12 -   9816681 ctt-t--at-----ttac-tt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24417  4 +     69807 ----------------ac-tt
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41612  4 -     80239 ----------------ac-tt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563226 12 -   2598838 ttt-c--at-----ttta-tt
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            863 12 -      7103 ttt-c--gt-----ttta-tt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1460 12 -     11706 ttt-c--gt-----ttta-tt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5195 12 -     30655 ttt-c--gt-----ttta-tt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31520 12 +     46564 ttt-c--at-----ttta-tt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91791 12 -     98465 ttt-c--at-----ttta-tt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5430 12 +     35169 ttt-c--at-----ttta-tt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49398 10 -     66298 ttt-tgttt-----tt-----
i Pteronotus_parnellii.KE847780.1                        I 229 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1691  8 -     18639 t-ttc--at-----tt-----
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 5 C 0
s Pteropus_alecto.KB030862.1                               5838371  8 -  28871421 ttt-t--ct-----tt-----
i Pteropus_alecto.KB030862.1                             I 346 I 4
s Pteropus_vampyrus.KN525825.1                             3534932  8 -   4952924 ttt-t--ct-----tt-----
i Pteropus_vampyrus.KN525825.1                           I 346 I 4
s Puma_concolor.QAVW01001104.1                            18096056  8 +  38429054 ttt-t--at-----tt-----
i Puma_concolor.QAVW01001104.1                           I 5 C 0
s Pygathrix_cinerea.k141_1153803                             23808  4 +     91421 ----------------ac-tt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150301  4 -   7812017 ----------------ac-tt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4678  4 +     72585 ----------------ac-tt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911014  8 +   3329780 ttg-t--ct-----gt-----
i Rhinolophus_sinicus.LVEH01000134.1                     I 356 I 4
s Rhinopithecus_bieti.k119_221883                            25638  4 +     27361 ----------------ac-tt
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118986  4 + 195417433 ----------------ac-tt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233246  4 -   7961872 ----------------ac-tt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72380  8 -    116970 ttt-t--ct-----tt-----
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 346 I 4
s Saguinus_bicolor.k141_1429097                               1077 11 +     27962 ctt-t---a-----tttc-ct
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1082 11 +      6077 ctt-t---a-----tttc-ct
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1103 12 +      5971 ctt-t---a-----tttcctt
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1158 12 +      5932 CTT-T---A-----TTTCCTT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1304 12 -      2099 ctt-t---a-----tttcctt
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388335 11 - 209938924 ctt-t---a-----tttc-ct
i Saguinus_midas.LG03                                    C 0 I 87
s Saguinus_mystax.k141_8077960                                1105 12 +      5979 CTT-T---A-----TTTCCTT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1481 11 -      4301 ctt-t---a-----tttc-ct
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235554 12 +   5703754 ctt-t--at-----ttac-tt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5144 12 +     21866 ctt-t--at-----ttac-tt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113284  7 +    313613 ttc-t--gt-----t------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 5 C 0
s Semnopithecus_entellus.k141_158471                         22125  4 +     27374 ----------------gc-tt
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25644  4 +     58920 ----------------gc-tt
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12140  4 -     45317 ----------------gc-tt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19798  4 -     42441 ----------------gc-tt
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22478  4 -     29113 ----------------gc-tt
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25547  4 -     48123 ----------------gc-tt
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855951  8 -   1910179 ctt-t--gt-----tt-----
i Solenodon_paradoxus.SolPar_flattened_line_126          I 5 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3697  7 -     97271 t-t-a--at-----tt-----
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121726  8 +    196729 ttt-t--ct-----tt-----
i Suricata_suricatta.SurSur_flattened_line_6629          I 5 C 0
s Symphalangus_syndactylus.tarseq_199                       387708 12 +   1523678 ctt-t--at-----ttac-tt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11194  8 +     22964 TTT-T--CT-----TT-----
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 93 I 11
s Tapirus_indicus.TapInd_scaffold_7432                      188344  8 +    199430 ttt-t--at-----tt-----
i Tapirus_indicus.TapInd_scaffold_7432                   I 5 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102299  8 -    539355 ttt-t--at-----tt-----
i Tapirus_terrestris.TapTer_scaffold_755                 I 5 C 0
s Theropithecus_gelada.CM009954.1                           349998 12 - 186847797 ctt-t--at-----ttac-tt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477218  8 -    610378 CTT-T--TT-----TA-----
i Tonatia_saurophila.TonSau_scaffold_294                 I 234 I 4
s Trachypithecus_auratus.k141_1189070                        17691  4 +     26378 ----------------gc-tt
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30373  4 -     78344 ----------------gc-tt
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17012  4 +     25722 ----------------gc-tt
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25235  4 -     62838 ----------------gc-tt
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25352  4 +     46913 ----------------gc-tt
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6160  4 -     28527 ----------------gc-tt
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27174  4 -     64340 ----------------gc-tt
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25211  4 -     63452 ----------------gc-tt
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6654  4 +     22490 ----------------gc-tt
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                           83  4 -      6147 ----------------gc-tt
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7078  4 -     13050 ----------------gc-tt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252315  4 -   6242583 ----------------gc-tt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58046  4 +     59866 ----------------gc-tt
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830281 13 -   4065304 tcc-t--attgtagtt-----
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4833 13 -     70247 TCC-T--ATTGTAGTT-----
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104514  8 -    105689 TTT-T--GT-----TT-----
i Uropsilus_gracilis.UroGra_scaffold_7153                I 5 C 0
s Ursus_maritimus.KK499267.1                                178585  8 +   5085361 ttt-c--at-----ta-----
i Ursus_maritimus.KK499267.1                             I 5 C 0
s Varecia_rubra.k141_787544                                  22295 12 -     30710 ttt-c--at-----ttta-tt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21202 12 -    147434 ttt-c--at-----ttta-tt
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102018  8 -    112863 ttt-c--at-----tt-----
i Vulpes_lagopus.VulLag_flattened_line_12041             I 5 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25859  8 -     86975 ttt-c--at-----tt-----
i Zalophus_californianus.ZalCal_flattened_line_17732     I 5 C 0
e Loris_tardigradus.ctg83                                  5036753 3543 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            3094 3543 +     19643 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17338 56 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107666 50 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10335 52 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tarsius_wallacei.k141_226975                                4353  0 +     20590 C
e Tarsius_lariang.k141_1780720                                4314  0 +      6850 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 219 58 +      5583 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117101 58 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Cephalopachus_bancanus.k141_72622                            791  0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Carlito_syrichta.NW_007259797.1                           267622  0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1390 7 +     36723 TTA-C-T-T---T
s Acinonyx_jubatus.LLWD01001279.1                           809802 6 +   1699592 -ct-t-t-c---t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412069 6 +  29979442 -at-t-t-c---t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44678 4 +     53615 tta-c--------
i Allenopithecus_nigroviridis.k141_3755588               C 0 I 2
s Allochrocebus_lhoesti.k141_441277                          40501 4 +     44087 tta-c--------
i Allochrocebus_lhoesti.k141_441277                      C 0 I 2
s Allochrocebus_preussi.k141_1993939                         13205 4 -     21945 tta-c--------
i Allochrocebus_preussi.k141_1993939                     C 0 I 2
s Allochrocebus_solatus.k141_3554717                         14883 4 +     32033 tta-c--------
i Allochrocebus_solatus.k141_3554717                     C 0 I 2
s Alouatta_belzebul.k141_1011583                             69432 7 -     84148 tta-c-t-t---t
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41663 7 -     78289 tta-c-t-t---t
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41111 7 +     55831 tta-c-t-t---t
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39549 7 -     64179 tta-c-t-t---t
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21195 7 -     24835 tta-c-t-t---t
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38178 7 +     45454 tta-c-t-t---t
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43877 7 +     70886 tta-c-t-t---t
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6001 7 +     30854 tta-c-t-t---t
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30140 7 +     42133 tta-c-t-t---t
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   47958 8 -     65372 tta-c-ttt---t
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41703 8 +     43593 tta-c-ttt---t
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669716 8 +   5030052 ata-c-ttt---t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21358 8 -     23494 tta-c-ttt---t
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6494 8 +      8415 tta-c-ttt---t
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16544 7 -     45910 tac-t-a-t---t
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271939 7 +  21539123 tta-c-t-t---t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8107 7 +     48076 tta-c-t-t---t
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3243 7 -     28759 tta-c-t-t---t
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30796 7 +     44353 tta-c-t-t---t
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46168 7 -     71267 tta-c-t-t---t
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20227 7 -     33135 tta-c-t-t---t
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3362 7 +     11645 tac-t-a-t---t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3363 7 -     19611 tac-t-a-t---t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5136 7 +     28062 tta-c-t-t---t
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40430 7 -     91139 tta-c-t-t---t
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17956 7 +     95584 tta-c-t-t---t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17869 7 +    119600 tta-c-t-t---t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7359 8 +     18648 tta-c-ttt---t
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15720 8 +     17162 tta-a-ttt---t
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450675 8 + 189096842 TTA-A-TTT---T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16968 8 -     18408 tta-a-ttt---t
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502374 6 +  60362399 -at-t-t-c---t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6004 6 -     23171 -at-t-t-c---t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219365 6 +   9314153 -at-t-t-c---t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41612490 6 +  59632846 -at-t-t-c---t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104060 6 -  63665305 -at-t-t-c---t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Cebuella_niveiventris.k141_592277                           2254 8 -     12580 tta-c-ttt---t
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40140 8 +     53515 tta-c-ttt---t
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368343 8 -  26074798 tta-ctt-t---t
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5232 8 -     34880 tta-ctt-t---t
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64327 8 -     89041 tta-ctt-t---t
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489318 6 -  27778364 -gc-t-t-t---c
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16151 6 +     27315 -gc-t-t-t---c
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137840 4 -   4669795 tca-c--------
i Cercocebus_atys.KQ010504.1                             C 0 I 2
s Cercocebus_chrysogaster.k141_1522556                       41580 4 +     47900 tca-c--------
i Cercocebus_chrysogaster.k141_1522556                   C 0 I 2
s Cercocebus_lunulatus.k141_2779015                          41413 4 -     44860 tca-c--------
i Cercocebus_lunulatus.k141_2779015                      C 0 I 2
s Cercocebus_torquatus.k141_2159127                          41396 4 -    148725 tca-c--------
i Cercocebus_torquatus.k141_2159127                      C 0 I 2
s Cercopithecus_ascanius.k141_3120866                        24459 4 -     40656 tta-c--------
i Cercopithecus_ascanius.k141_3120866                    C 0 I 2
s Cercopithecus_cephus.k141_4183004                           4395 4 +     20796 tta-c--------
i Cercopithecus_cephus.k141_4183004                      C 0 I 2
s Cercopithecus_diana.k141_132293                             8651 4 -     17524 tta-c--------
i Cercopithecus_diana.k141_132293                        C 0 I 2
s Cercopithecus_hamlyni.k141_566925                          24339 4 -     34525 tta-c--------
i Cercopithecus_hamlyni.k141_566925                      C 0 I 2
s Cercopithecus_lowei.k141_2101310                            9049 4 -     25376 tta-c--------
i Cercopithecus_lowei.k141_2101310                       C 0 I 2
s Cercopithecus_albogularis.ctg5                                  361615 4 -  39242232 tta-c--------
i Cercopithecus_albogularis.ctg5                               C 0 I 2
s Cercopithecus_mona.ctg39                                  267359 4 +  21565898 tta-c--------
i Cercopithecus_mona.ctg39                               C 0 I 2
s Cercopithecus_neglectus.k141_858615                        28815 4 -     45857 tta-c--------
i Cercopithecus_neglectus.k141_858615                    C 0 I 2
s Cercopithecus_nictitans.k141_2995370                       24604 4 -     32606 tta-c--------
i Cercopithecus_nictitans.k141_2995370                   C 0 I 2
s Cercopithecus_petaurista.k141_42573                          790 4 +      8499 tta-c--------
i Cercopithecus_petaurista.k141_42573                    C 0 I 2
s Cercopithecus_pogonias.k141_6079                           22308 4 +     70610 tta-c--------
i Cercopithecus_pogonias.k141_6079                       C 0 I 2
s Cercopithecus_roloway.k141_3012935                         19168 4 +     36323 tta-c--------
i Cercopithecus_roloway.k141_3012935                     C 0 I 2
s Cheirogaleus_major.k141_666340                             27789 7 -     33796 tac-t-a-t---t
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1976 7 -     15404 tac-t-a-t---t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6230 7 -     32913 tta-c-t-t---t
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16643 7 -     40346 tta-c-t-t---t
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16907 7 +    216457 tta-c-t-t---t
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16691 7 +     39636 tta-c-t-t---t
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1091 7 +      5346 gta-c-t-t---t
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39776 8 -    112038 tta-c-ttt---t
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5348 8 +     34062 tta-c-ttt---t
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340064 4 +  18827391 tta-c--------
i Chlorocebus_aethiops.ctg25                             C 0 I 2
s Chlorocebus_pygerythrus.k141_3063162                        6675 4 -     44032 tta-c--------
i Chlorocebus_pygerythrus.k141_3063162                   C 0 I 2
s Chlorocebus_sabaeus.CM001947.1                            301390 4 - 135778131 tta-c--------
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 2
s Colobus_angolensis.KN981557.1                             405946 7 -   2368649 tta-c-t-t---t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375109 7 - 200372422 tta-c-t-t---t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5833 7 -      6605 tta-c-t-t---t
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804556 3 +  53390261 ------t-t---t
i Condylura_cristata.JH655891.1                          I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1041 1 +     87169 ------------t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Daubentonia_madagascariensis.ctg71                        289798 7 +  12879189 tac-t-a-g---t
i Daubentonia_madagascariensis.ctg71                     I 2 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661602 6 -   1390856 -gc-t-t-t---c
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136395 6 -    198055 -gc-t-t-t---c
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            62850802 9 - 111700974 -CC-T-T-GTTGT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105038 6 -  10337057 -ag-t-t-t---t
i Elephantulus_edwardii.JH947257.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               24913108 6 +  41312741 -at-t-t-c---t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              3038584 6 -   4378816 -ac-t-t-t---t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21372518 6 +  39960074 -ac-t-t-t---t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409304 6 -    498745 -ac-t-t-t---t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               259622 4 +  21539334 tta-c--------
i Erythrocebus_patas.Contig38                            C 0 I 2
s Felis_catus.CM001381.2                                 186243467 6 - 206538554 -ct-t-t-c---t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185113249 6 - 205367284 -ct-t-t-c---t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24597 6 -     30238 -ct-t-t-c---t
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     120620 7 -    137831 tac-t-a-t---t
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4161 7 +     22493 tac-t-a-t---t
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17636 7 +     32986 TAC-T-A-T---T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16212 6 +     18121 -ac-t-t-c---t
i Galeopterus_variegatus.GalVar_scaffold_74466           I 8 C 0
s Gorilla_beringei.k141_3358147                               1753 7 -      8343 tta-c-a-t---t
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251243 7 - 186649187 tta-c-t-t---t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27574 6 -    327341 -ct-t-a-c---t
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    139137 7 -    630532 tta-c-t-t---t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66030 6 +     83186 -ct-t-t-c---t
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               2171 7 +     12352 tta-c-t-t---t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9354 7 +     55766 tta-c-t-t---t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048692 7 + 191637585 tta-c-t-t---t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798024 7 +  11177569 tta-c-t-t---t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     855 7 -      1527 tac-t-g-t---t
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40485 7 +    110728 tta-c-t-t---t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1171 8 -     13097 tta-c-ttt---t
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1122 8 +      5940 TTA-C-TTT---T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         753 8 -      5717 tta-c-ttt---t
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7392 8 -     11567 tta-c-ttt---t
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8773 8 -     12945 tta-c-ttt---t
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6149 7 +     29618 tac-t-a-t---t
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6146 7 +     31569 tac-t-a-t---t
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6158 7 +     24756 tac-t-a-t---t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6150 7 +     16388 tac-t-a-t---t
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810464 6 -   3914936 -at-t-t-c---t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               329796 4 -   1826925 tca-c--------
i Lophocebus_aterrimus.ctg367                            C 0 I 2
s Lycaon_pictus.CM007581.1                                41611645 6 +  59628241 -at-t-t-c---t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42078 4 -     61512 tca-c--------
i Macaca_arctoides.k141_1757516                          C 0 I 2
s Macaca_assamensis.Contig5                                 369706 4 -  60120075 tca-c--------
i Macaca_assamensis.Contig5                              C 0 I 2
s Macaca_cyclopis.k119_263443                                22026 4 +     30207 tca-c--------
i Macaca_cyclopis.k119_263443                            C 0 I 2
s Macaca_fascicularis.k141_1397292                           19129 4 -     24934 tca-c--------
i Macaca_fascicularis.k141_1397292                       C 0 I 2
s Macaca_fuscata.k119_546792                                 21912 4 +     30527 tca-c--------
i Macaca_fuscata.k119_546792                             C 0 I 2
s Macaca_leonina.k141_321385                                 33102 4 -     50087 tca-c--------
i Macaca_leonina.k141_321385                             C 0 I 2
s Macaca_maura.k141_1103459                                  42840 4 +     51645 tca-c--------
i Macaca_maura.k141_1103459                              C 0 I 2
s Macaca_mulatta.NC_041758.1                                411414 4 - 187317192 tca-c--------
i Macaca_mulatta.NC_041758.1                             C 0 I 2
s Macaca_nemestrina.KQ007038.1                              396297 4 +  25927173 tca-c--------
i Macaca_nemestrina.KQ007038.1                           C 0 I 2
s Macaca_nigra.k141_2818840                                  45428 4 -     62418 tca-c--------
i Macaca_nigra.k141_2818840                              C 0 I 2
s Macaca_radiata.k141_3557992                                22116 4 +     24253 tca-c--------
i Macaca_radiata.k141_3557992                            C 0 I 2
s Macaca_siberu.k141_2185972                                 41873 4 +     59329 tca-c--------
i Macaca_siberu.k141_2185972                             C 0 I 2
s Macaca_silenus.Contig273                                  267705 4 +    668171 tca-c--------
i Macaca_silenus.Contig273                               C 0 I 2
s Macaca_thibetana.k99_41370                                 19051 4 +     21031 tca-c--------
i Macaca_thibetana.k99_41370                             C 0 I 2
s Macaca_tonkeana.k141_1880923                               32784 4 +     33478 tca-c--------
i Macaca_tonkeana.k141_1880923                           C 0 I 2
s Mandrillus_leucophaeus.scaffold280                        319181 4 +  24302211 tca-c--------
i Mandrillus_leucophaeus.scaffold280                     C 0 I 2
s Mandrillus_sphinx.Contig270                               354013 4 -    752769 tca-c--------
i Mandrillus_sphinx.Contig270                            C 0 I 2
s Manis_javanica.JSZB01003497.1                             670679 6 -    737560 -at-t-t-a---t
i Manis_javanica.JSZB01003497.1                          C 0 I 2
s Manis_pentadactyla.KN006162.1                             217971 6 +    317179 -at-t-t-a---t
i Manis_pentadactyla.KN006162.1                          C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_19308             22977 6 -     74585 -at-a-t-c---t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mico_argentatus.k141_582562                                 7134 5 +     17804 ----c-ttt---t
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7915 8 -     12984 tta-c-ttt---t
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15869 5 -     26561 ----c-ttt---t
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981758 7 +  93316391 tac-t-g-t---t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41120 6 +    145209 -cc-t-t-g---t
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19173 4 -     27822 tta-c--------
i Miopithecus_ogouensis.k141_1534655                     C 0 I 2
s Mirounga_angustirostris.MirAng_flattened_line_54046         5473 6 +     27589 -at-t-t-c---t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     49616 7 -     62432 tac-t-a-t---t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15328 6 -     63510 -ct-t-a-c---t
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mustela_putorius.JH418006.1                             14351912 6 +  14710649 -at-t-t-c---g
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_1350636                              25480 7 +     34575 tta-c-t-t---t
i Nasalis_larvatus.k141_1350636                          C 0 I 307
s Neomonachus_schauinslandi.NINY01007730.1                11465859 6 -  31847680 -at-t-t-c---t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nomascus_annamensis.k141_1771965                           50433 7 -    132029 tta-c-t-t---t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6529 7 -     16345 tta-c-t-t---t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12413 8 +     22201 tta-c-ttt---t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410749 7 -  22158432 tta-c-t-t---t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22812 7 -     54323 tta-c-t-t---t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195260 6 +   9404916 -at-t-t-c---t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93631890 7 + 196305487 tac-t-a-t---t
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1279 7 +      2758 tac-t-a-t---t
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560144 7 - 199412804 tac-t-a-t---t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448646 6 +   2017862 -at-t-t-c---t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              10546 6 -     14239 -ac-t-t-t---t
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36303 6 +    559221 -at-t-t-c---t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        35751 7 -     51505 tac-t-a-t---t
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             348766 7 +   1103335 tac-t-a-t---t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468632 7 - 189151597 tta-c-a-t---t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21187 6 -    230217 -ct-t-t-c---t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18458513 6 -  18783137 -ct-t-t-c---t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3969238 6 +   8748460 -ct-t-t-c---t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240024 4 - 183742232 tca-c--------
i Papio_anubis.CM001495.2                                C 0 I 2
s Papio_cynocephalus.k141_1507553                             6490 4 +     21308 tca-c--------
i Papio_cynocephalus.k141_1507553                        C 0 I 2
s Papio_hamadryas.Contig39                                  287527 4 -  20919399 tca-c--------
i Papio_hamadryas.Contig39                               C 0 I 2
s Papio_kindae.k141_2214839                                  19143 4 -     27687 tca-c--------
i Papio_kindae.k141_2214839                              C 0 I 2
s Papio_papio.k141_799093                                    12279 4 +     16796 tca-c--------
i Papio_papio.k141_799093                                C 0 I 2
s Papio_ursinus.k141_2278143                                 19089 4 -     23640 tca-c--------
i Papio_ursinus.k141_2278143                             C 0 I 2
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12101 6 +     78924 -at-t-t-c---t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          21988 7 +     31479 tac-t-a-t---t
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14358 7 -     24908 tac-t-a-t---t
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5937 7 +      7560 tta-c-t-t---t
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61644 7 -     63152 tta-c-t-t---t
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44243 7 +     45295 tta-c-t-t---t
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1922 7 +      5735 tta-c-t-t---t
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62126 7 +    207309 tta-c-t-t---t
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3246 7 -     25401 tta-c-t-t---t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28961 7 +     58159 tta-c-t-t---t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29237 7 +     63561 tta-c-t-t---t
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29000 7 +     51148 tta-c-t-t---t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              553993 7 -   4542175 tta-c-t-t---t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28984 7 +     51125 tta-c-t-t---t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5404 7 +     39866 tta-c-t-t---t
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           491 7 -      9282 tta-c-t-t---t
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39892 7 -     87950 tta-c-t-t---t
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40285 7 -     88961 tta-c-t-t---t
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4984 7 -     39403 tta-c-t-t---t
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39938 7 +     87928 tta-c-t-t---t
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4982 7 -     60166 tta-c-t-t---t
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11918 7 -     67232 tta-c-t-t---t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39834 7 -     90634 tta-c-t-t---t
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41302 7 +     89403 tta-c-t-t---t
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174255 7 - 189387572 tta-c-t-t---t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189253 7 -   9816681 tta-c-t-t---t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24421 7 +     69807 tta-c-t-t---t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41616 7 -     80239 tta-c-t-t---t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563238 7 -   2598838 tac-t-a-t---t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            875 7 -      7103 tac-t-a-t---t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1472 7 -     11706 tac-t-a-t---t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5207 7 -     30655 tac-t-a-t---t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31532 7 +     46564 tac-t-a-t---t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91803 7 -     98465 tac-t-a-t---t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5442 7 +     35169 tac-t-a-t---t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1699 6 -     18639 -at-t-t-c---t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096064 6 +  38429054 -ct-t-t-c---t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23812 7 +     91421 tta-c-t-t---t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150305 7 -   7812017 tta-c-t-t---t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4682 7 +     72585 tta-c-t-t---t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_221883                            25642 7 +     27361 tta-c-t-c---t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118990 7 + 195417433 tta-c-t-t---t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233250 7 -   7961872 tta-c-t-c---t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               1088 8 +     27962 tgt-a-ctt---t
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1093 9 +      6077 tttac-ttt---t
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1115 8 +      5971 tta-c-ttt---t
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1170 8 +      5932 TTA-C-TTT---T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1316 8 -      2099 tta-c-ttt---t
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388433 8 - 209938924 tat-c-ttt---t
i Saguinus_midas.LG03                                    I 87 C 0
s Saguinus_mystax.k141_8077960                                1117 8 +      5979 TTA-C-TTT---T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1492 9 -      4301 tttac-ttt---t
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235566 8 +   5703754 tta-ctt-t---t
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5156 8 +     21866 tta-ctt-t---t
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113291 5 +    313613 --c-t-t-t---t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22129 7 +     27374 tta-c-t-t---t
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25648 7 +     58920 tta-c-t-t---t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12144 7 -     45317 tta-c-t-t---t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19802 7 -     42441 tta-c-t-t---t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22482 7 -     29113 tta-c-t-t---t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25551 7 -     48123 tta-c-t-t---t
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855959 6 -   1910179 -ac-t-t-a---t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3704 6 -     97271 -at-t-t-c---t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121734 6 +    196729 -ct-t-t-c---t
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387720 7 +   1523678 tta-c-t-t---t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188352 6 +    199430 -ac-t-t-t---t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102307 6 -    539355 -ac-t-t-t---t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                           350010 4 - 186847797 tca-c--------
i Theropithecus_gelada.CM009954.1                        C 0 I 2
s Trachypithecus_auratus.k141_1189070                        17695 7 +     26378 tta-c-t-t---t
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30377 7 -     78344 tta-c-t-t---t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17016 7 +     25722 tta-c-t-t---t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25239 7 -     62838 tta-c-t-t---t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25356 7 +     46913 tta-c-t-t---t
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6164 7 -     28527 tta-c-t-t---t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27178 7 -     64340 tta-c-t-t---t
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25215 7 -     63452 tta-c-t-t---t
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6658 7 +     22490 tta-c-t-t---t
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                           87 7 -      6147 tta-c-t-t---t
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7082 7 -     13050 tta-c-t-t---t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252319 7 -   6242583 tta-c-t-t---t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58050 7 +     59866 tta-c-t-t---t
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830294 6 -   4065304 -ac-t-t-c---t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4846 6 -     70247 -AC-T-T-C---T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104522 6 -    105689 -AC-T-T-T---T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178593 6 +   5085361 -at-t-t-c---t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22307 7 -     30710 tac-t-a-t---t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21214 7 -    147434 tac-t-a-t---t
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102026 6 -    112863 -at-t-t-c---t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25867 6 -     86975 -at-t-t-c---t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Desmodus_rotundus.KZ672289.1                            11862220 6 -  20541912 I
e Loris_tardigradus.ctg83                                  5036753 3543 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            3094 3543 +     19643 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17338 56 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107666 50 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10335 52 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2550 4 +      5315 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2478 4 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    477226 4 -    610378 I
e Tarsius_wallacei.k141_226975                                4353 0 +     20590 C
e Tarsius_lariang.k141_1780720                                4314 0 +      6850 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 219 58 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11202 11 +     22964 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72388 4 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2911022 4 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Pteropus_vampyrus.KN525825.1                             3534940 4 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838379 4 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49408 4 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   124997 0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117101 58 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176342 4 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182165 4 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       147930 4 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                220749 4 -    270270 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_galeritus.HipGal_scaffold_23202               46991 4 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547674 4 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3787 4 +     19438 I
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           228 4 -      8242 I
e Cephalopachus_bancanus.k141_72622                            791 0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Carlito_syrichta.NW_007259797.1                           267622 0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Callimico_goeldii.k141_1609886                              7041 0 -     13885 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174191 4 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1397 8 +     36723 TT-TA-TTTA
s Acinonyx_jubatus.LLWD01001279.1                           809808 7 +   1699592 tt-ga-tt-t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412075 7 +  29979442 at-ca-tt-t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   44684 8 +     53615 tt-ta-tttc
i Allenopithecus_nigroviridis.k141_3755588               I 2 C 0
s Allochrocebus_lhoesti.k141_441277                          40507 8 +     44087 tt-ta-tttc
i Allochrocebus_lhoesti.k141_441277                      I 2 C 0
s Allochrocebus_preussi.k141_1993939                         13211 8 -     21945 tt-ta-tttc
i Allochrocebus_preussi.k141_1993939                     I 2 C 0
s Allochrocebus_solatus.k141_3554717                         14889 8 +     32033 tt-ta-tttc
i Allochrocebus_solatus.k141_3554717                     I 2 C 0
s Alouatta_belzebul.k141_1011583                             69439 9 -     84148 tttta-tttc
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41670 7 -     78289 tt--a-tttc
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41118 9 +     55831 tttta-tttc
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39556 9 -     64179 tttta-tttc
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21202 9 -     24835 tttta-tttc
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38185 9 +     45454 tttta-tttc
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43884 9 +     70886 tttta-tttc
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6008 9 +     30854 tttta-tttc
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30147 9 +     42133 tttta-tttc
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174195 6 -    412891 -t-ag-tt-t
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 C 0
s Aotus_azarae.k141_118258                                   47966 7 -     65372 t--ta-tttc
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41711 7 +     43593 t--ta-tttc
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669724 7 +   5030052 t--ta-tttc
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21366 7 -     23494 t--ta-tttc
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6502 7 +      8415 t--ta-tttc
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16551 8 -     45910 tt-cc-tttc
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2482 6 -     15198 -t-ag-tt-t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 4 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271946 9 +  21539123 tttta-tttc
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8114 9 +     48076 tttta-tttc
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3250 9 -     28759 tttta-tttc
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30803 9 +     44353 tttta-tttc
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46175 9 -     71267 tttta-tttc
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20234 9 -     33135 tttta-tttc
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3369 8 +     11645 tt-cc-tttt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3370 8 -     19611 tt-cc-tttt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5143 9 +     28062 tttta-tttc
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40437 9 -     91139 tttta-tttc
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17963 9 +     95584 tttta-tttc
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17876 9 +    119600 tttta-tttc
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7367 8 +     18648 tt-ta-tttc
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7041 7 -     13885 -t-ta-tttc
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15728 8 +     17162 tt-ta-tttc
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450683 8 + 189096842 TT-TA-TTTC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16976 8 -     18408 tt-ta-tttc
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502380 7 +  60362399 tt-ca-tt-t
i CanFam4.chr16                                          C 0 I 192
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6010 7 -     23171 tt-ca-tt-t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 192
s Canis_lupus_dingo.QKWQ01000480.1                          219371 7 +   9314153 tt-ca-tt-t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 192
s Canis_lupus_familiaris.chr16                            41612496 7 +  59632846 tt-ca-tt-t
i Canis_lupus_familiaris.chr16                           C 0 I 192
s Canis_lupus_orion.HG994398.1                            45104066 7 -  63665305 tt-ca-tt-t
i Canis_lupus_orion.HG994398.1                           C 0 I 192
s Carollia_perspicillata.CarPer_scaffold_170178               2554 6 +      5315 -T-AG-TT-T
i Carollia_perspicillata.CarPer_scaffold_170178          I 4 C 0
s Cebuella_niveiventris.k141_592277                           2262 8 -     12580 tt-ta-tttc
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40148 8 +     53515 tt-ta-tttc
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368351 8 -  26074798 tt-ta-tttc
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5240 8 -     34880 tt-ta-tttc
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64335 8 -     89041 tt-ta-tttc
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489324 7 -  27778364 tt-ca-tt-t
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16157 7 +     27315 tt-ca-tt-t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 1
s Cercocebus_atys.KQ010504.1                                137846 8 -   4669795 tt-ta-tttc
i Cercocebus_atys.KQ010504.1                             I 2 C 0
s Cercocebus_chrysogaster.k141_1522556                       41586 8 +     47900 tt-ta-tttc
i Cercocebus_chrysogaster.k141_1522556                   I 2 C 0
s Cercocebus_lunulatus.k141_2779015                          41419 8 -     44860 tt-ta-tttc
i Cercocebus_lunulatus.k141_2779015                      I 2 C 0
s Cercocebus_torquatus.k141_2159127                          41402 8 -    148725 tt-ta-tttc
i Cercocebus_torquatus.k141_2159127                      I 2 C 0
s Cercopithecus_ascanius.k141_3120866                        24465 8 -     40656 tt-ta-tttc
i Cercopithecus_ascanius.k141_3120866                    I 2 C 0
s Cercopithecus_cephus.k141_4183004                           4401 8 +     20796 tt-ta-tttc
i Cercopithecus_cephus.k141_4183004                      I 2 C 0
s Cercopithecus_diana.k141_132293                             8657 8 -     17524 tt-ta-tttc
i Cercopithecus_diana.k141_132293                        I 2 C 0
s Cercopithecus_hamlyni.k141_566925                          24345 8 -     34525 tt-ta-tttc
i Cercopithecus_hamlyni.k141_566925                      I 2 C 0
s Cercopithecus_lowei.k141_2101310                            9055 8 -     25376 tt-ta-tttc
i Cercopithecus_lowei.k141_2101310                       I 2 C 0
s Cercopithecus_albogularis.ctg5                                  361621 8 -  39242232 tt-ta-tttc
i Cercopithecus_albogularis.ctg5                               I 2 C 0
s Cercopithecus_mona.ctg39                                  267365 8 +  21565898 tt-ta-tttc
i Cercopithecus_mona.ctg39                               I 2 C 0
s Cercopithecus_neglectus.k141_858615                        28821 8 -     45857 tt-ta-tttc
i Cercopithecus_neglectus.k141_858615                    I 2 C 0
s Cercopithecus_nictitans.k141_2995370                       24610 8 -     32606 tt-ta-tttc
i Cercopithecus_nictitans.k141_2995370                   I 2 C 0
s Cercopithecus_petaurista.k141_42573                          796 8 +      8499 tt-ta-tttc
i Cercopithecus_petaurista.k141_42573                    I 2 C 0
s Cercopithecus_pogonias.k141_6079                           22314 8 +     70610 tt-ta-tttc
i Cercopithecus_pogonias.k141_6079                       I 2 C 0
s Cercopithecus_roloway.k141_3012935                         19174 8 +     36323 tt-ta-tttc
i Cercopithecus_roloway.k141_3012935                     I 2 C 0
s Cheirogaleus_major.k141_666340                             27796 8 -     33796 tt-cc-tttc
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1983 8 -     15404 tt-cc-tttc
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6237 9 -     32913 tt-taatttc
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16650 9 -     40346 tt-taatttc
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16914 9 +    216457 tt-taatttc
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16698 9 +     39636 tt-taatttc
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1098 8 +      5346 tt-ta-tttc
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39784 8 -    112038 tt-ta-tttc
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5356 8 +     34062 tt-ta-tttc
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340070 8 +  18827391 tt-ta-tttc
i Chlorocebus_aethiops.ctg25                             I 2 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6681 8 -     44032 tt-ta-tttc
i Chlorocebus_pygerythrus.k141_3063162                   I 2 C 0
s Chlorocebus_sabaeus.CM001947.1                            301396 8 - 135778131 tt-ta-tttc
i Chlorocebus_sabaeus.CM001947.1                         I 2 C 0
s Colobus_angolensis.KN981557.1                             405953 8 -   2368649 tt-ta-tttc
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375116 8 - 200372422 tt-ta-tttc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5840 8 -      6605 tt-ta-tttc
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804559 7 +  53390261 tt-ta-tt-t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           232 6 -      8242 -T-AT-AT-A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 4 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1042 7 +     87169 tt-ga-tt-t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Daubentonia_madagascariensis.ctg71                        289805 8 +  12879189 tt-cc-tttc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862226 6 -  20541912 -t-ag-tt-t
i Desmodus_rotundus.KZ672289.1                           I 6 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661608 7 -   1390856 tt-ca-tt-t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                  136401 7 -    198055 tt-ca-tt-t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Echinops_telfairi.JH980293.1                            62850811 7 - 111700974 TT-CA-AT-G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               3791 6 +     19438 -t-aa-tt-t
i Eidolon_helvum.AWHC01266696.1                          I 4 C 0
s Elephantulus_edwardii.JH947257.1                         9105045 7 -  10337057 tt-tg-ta-a
i Elephantulus_edwardii.JH947257.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               24913114 7 +  41312741 at-ca-tt-t
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Equus_asinus.JREZ01000139.1                              3038590 7 -   4378816 tt-ca-tt-t
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               21372524 7 +  39960074 tt-ca-tt-t
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                              409310 7 -    498745 tt-ca-tt-t
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erythrocebus_patas.Contig38                               259628 8 +  21539334 tt-ta-tttc
i Erythrocebus_patas.Contig38                            I 2 C 0
s Felis_catus.CM001381.2                                 186243473 7 - 206538554 tt-ga-tt-t
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                          185113255 7 - 205367284 tt-ga-tt-t
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_31944                 24603 7 -     30238 tt-ga-tt-t
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 1
s Galago_moholi.ctg3793                                     120627 8 -    137831 tt-cc-tttc
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4168 8 +     22493 tt-cc-tttc
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17643 8 +     32986 TT-CC-CTTC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16218 8 +     18121 tt-ca-tttc
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1760 8 -      8343 tt-ta-ttta
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251250 8 - 186649187 tt-ta-ttta
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27580 7 -    327341 tt-ga-tt-t
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hipposideros_armiger.JXIK01000431.1                      1547678 6 -   1711038 -t-at-tt-t
i Hipposideros_armiger.JXIK01000431.1                    I 4 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               46995 5 +     49977 -t-at-tt--
i Hipposideros_galeritus.HipGal_scaffold_23202           I 4 C 0
s Hoolock_leuconedys.ctg274                                    139144 8 -    630532 tt-ta-tttc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66036 7 +     83186 tt-ga-tt-t
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 1
s Hylobates_agilis.k141_1155965                               2178 8 +     12352 tt-ta-tttc
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9361 8 +     55766 tt-ta-tttc
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048699 8 + 191637585 tt-ta-tttc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798031 8 +  11177569 tt-ta-tttc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     862 8 -      1527 tt-cc-tttt
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40492 8 +    110728 tt-ta-tttc
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1179 8 -     13097 tt-ta-tttc
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1130 8 +      5940 TT-TA-TTTC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         761 8 -      5717 tt-ta-tttc
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7400 9 -     11567 tt-taatttc
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8781 9 -     12945 tt-taatttc
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6156 8 +     29618 tt-cc-tttc
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6153 8 +     31569 tt-cc-tttc
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6165 8 +     24756 tt-cc-tttt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6157 8 +     16388 tt-cc-tttc
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810470 7 -   3914936 tt-ca-tt-t
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lophocebus_aterrimus.ctg367                               329802 8 -   1826925 tt-ta-tttc
i Lophocebus_aterrimus.ctg367                            I 2 C 0
s Lycaon_pictus.CM007581.1                                41611651 7 +  59628241 tt-ca-tt-t
i Lycaon_pictus.CM007581.1                               C 0 I 192
s Macaca_arctoides.k141_1757516                              42084 8 -     61512 tt-ta-tttc
i Macaca_arctoides.k141_1757516                          I 2 C 0
s Macaca_assamensis.Contig5                                 369712 8 -  60120075 tt-ta-tttc
i Macaca_assamensis.Contig5                              I 2 C 0
s Macaca_cyclopis.k119_263443                                22032 8 +     30207 tt-ta-tttc
i Macaca_cyclopis.k119_263443                            I 2 C 0
s Macaca_fascicularis.k141_1397292                           19135 8 -     24934 tt-ta-tttc
i Macaca_fascicularis.k141_1397292                       I 2 C 0
s Macaca_fuscata.k119_546792                                 21918 8 +     30527 tt-ta-tttc
i Macaca_fuscata.k119_546792                             I 2 C 0
s Macaca_leonina.k141_321385                                 33108 8 -     50087 tt-ta-tttc
i Macaca_leonina.k141_321385                             I 2 C 0
s Macaca_maura.k141_1103459                                  42846 8 +     51645 tt-ta-tttc
i Macaca_maura.k141_1103459                              I 2 C 0
s Macaca_mulatta.NC_041758.1                                411420 8 - 187317192 tt-ta-tttc
i Macaca_mulatta.NC_041758.1                             I 2 C 0
s Macaca_nemestrina.KQ007038.1                              396303 8 +  25927173 tt-ta-tttc
i Macaca_nemestrina.KQ007038.1                           I 2 C 0
s Macaca_nigra.k141_2818840                                  45434 8 -     62418 tt-ta-tttc
i Macaca_nigra.k141_2818840                              I 2 C 0
s Macaca_radiata.k141_3557992                                22122 8 +     24253 tt-ta-tttc
i Macaca_radiata.k141_3557992                            I 2 C 0
s Macaca_siberu.k141_2185972                                 41879 8 +     59329 tt-ta-tttc
i Macaca_siberu.k141_2185972                             I 2 C 0
s Macaca_silenus.Contig273                                  267711 8 +    668171 tt-ta-tttc
i Macaca_silenus.Contig273                               I 2 C 0
s Macaca_thibetana.k99_41370                                 19057 8 +     21031 tt-ta-tttc
i Macaca_thibetana.k99_41370                             I 2 C 0
s Macaca_tonkeana.k141_1880923                               32790 8 +     33478 tt-ta-tttc
i Macaca_tonkeana.k141_1880923                           I 2 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220753 6 -    270270 -t-ag-tt-t
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 4 C 0
s Mandrillus_leucophaeus.scaffold280                        319187 8 +  24302211 tt-ta-tttc
i Mandrillus_leucophaeus.scaffold280                     I 2 C 0
s Mandrillus_sphinx.Contig270                               354019 8 -    752769 tt-ta-tttc
i Mandrillus_sphinx.Contig270                            I 2 C 0
s Manis_javanica.JSZB01003497.1                             670687 7 -    737560 tt-ca-tt-t
i Manis_javanica.JSZB01003497.1                          I 2 I 1
s Manis_pentadactyla.KN006162.1                             217979 7 +    317179 tt-ca-tt-t
i Manis_pentadactyla.KN006162.1                          I 2 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                       147934 6 +    207569 -t-gg-tt-t
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             22983 7 -     74585 at-ca-tt-t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 1
s Mico_argentatus.k141_582562                                 7139 8 +     17804 tt-ta-tttc
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7923 8 -     12984 tt-ta-tttc
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15874 8 -     26561 tt-ta-tttc
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981765 8 +  93316391 tt-cc-tTTC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41126 7 +    145209 tt-tg-at-g
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182169 6 +    200668 -t-ag-tt-t
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 4 C 0
s Miopithecus_ogouensis.k141_1534655                         19179 8 -     27822 tt-ta-tttc
i Miopithecus_ogouensis.k141_1534655                     I 2 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5479 7 +     27589 tt-ca-tt-t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 1
s Mirza_zaza.k141_766280                                     49623 8 -     62432 tt-cc-ttac
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176346 6 +    366855 -t-ag-tt-t
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15334 7 -     63510 tt-ga-tt-t
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 1
s Mustela_putorius.JH418006.1                             14351918 7 +  14710649 at-ca-tt-t
i Mustela_putorius.JH418006.1                            C 0 I 1
s Nasalis_larvatus.k141_1350636                              25794 8 +     34575 tt-ta-tttc
i Nasalis_larvatus.k141_1350636                          I 307 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465865 7 -  31847680 tt-ca-tt-t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_7894                   124997 6 -    149072 -T-AG-TT-T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           50440 8 -    132029 tt-ta-tttc
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6536 8 -     16345 tt-ta-tttc
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12421 8 +     22201 tt-ta-tttc
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410756 8 -  22158432 tt-ta-tttc
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22819 8 -     54323 tt-ta-tttc
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195266 7 +   9404916 tt-ca-tt-t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 195
s Nycticebus_bengalensis.LG01                             93631897 4 + 196305487 tt-ct-----
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1286 4 +      2758 tt-ct-----
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560151 4 - 199412804 tt-ct-----
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448652 7 +   2017862 tt-ca-tt-t
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_171931              10552 7 -     14239 tt-ca-tt-t
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36309 6 +    559221 tt-ca-tt--
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 192
s Otolemur_crassicaudatus.k141_649260                        35758 8 -     51505 tt-cc-tttc
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             348773 8 +   1103335 tt-cc-tttc
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468639 8 - 189151597 tt-ta-ttta
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21193 7 -    230217 tt-ga-tt-t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                              18458519 7 -  18783137 tt-ga-tt-t
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               3969244 7 +   8748460 tt-ga-tt-t
i Panthera_tigris.KE722367.1                             C 0 I 1
s Papio_anubis.CM001495.2                                   240030 8 - 183742232 tt-ta-tttt
i Papio_anubis.CM001495.2                                I 2 C 0
s Papio_cynocephalus.k141_1507553                             6496 8 +     21308 tt-ta-tttt
i Papio_cynocephalus.k141_1507553                        I 2 C 0
s Papio_hamadryas.Contig39                                  287533 8 -  20919399 tt-ta-tttt
i Papio_hamadryas.Contig39                               I 2 C 0
s Papio_kindae.k141_2214839                                  19149 8 -     27687 tt-ta-tttt
i Papio_kindae.k141_2214839                              I 2 C 0
s Papio_papio.k141_799093                                    12285 8 +     16796 tt-ta-tttt
i Papio_papio.k141_799093                                I 2 C 0
s Papio_ursinus.k141_2278143                                 19095 8 -     23640 tt-ta-tttt
i Papio_ursinus.k141_2278143                             I 2 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12107 7 +     78924 tt-ga-tt-t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_1921260                          21995 8 +     31479 tt-cc-tttc
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14365 8 -     24908 tt-cc-tttc
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5944 8 +      7560 tt-ta-tttt
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61651 8 -     63152 tt-ta-tttt
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44250 8 +     45295 tt-ta-tttt
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1929 8 +      5735 tt-ta-tttt
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62133 8 +    207309 tt-ta-tttc
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3253 8 -     25401 tt-ta-tttc
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28968 8 +     58159 tt-ta-tttc
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29244 8 +     63561 tt-ta-tttc
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29007 8 +     51148 tt-ta-tttc
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554000 8 -   4542175 tt-ta-tttc
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28991 8 +     51125 tt-ta-tttc
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5411 9 +     39866 tt-taatttc
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           498 9 -      9282 tt-taatttc
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39899 9 -     87950 tt-taatttc
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40292 9 -     88961 tt-taatttc
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          4991 9 -     39403 tt-taatttc
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39945 9 +     87928 tt-taatttc
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4989 9 -     60166 tt-taatttc
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11925 9 -     67232 tt-taatttc
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39841 9 -     90634 tt-taatttc
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41309 9 +     89403 tt-taatttc
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174262 8 - 189387572 tt-ta-tttc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189260 8 -   9816681 tt-ta-tttc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24428 8 +     69807 tt-ta-tttc
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41623 8 -     80239 tt-ta-tttc
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563245 8 -   2598838 tt-cc-tttt
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            882 8 -      7103 tt-cc-tttt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1479 8 -     11706 tt-cc-tttt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5214 8 -     30655 tt-cc-tttt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31539 8 +     46564 tt-cc-tttt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91810 8 -     98465 tt-cc-tttt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5449 8 +     35169 tt-cc-tttt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49412 6 -     66298 -t-aa-tt-t
i Pteronotus_parnellii.KE847780.1                        I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1705 7 -     18639 at-ca-tt-t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 1
s Pteropus_alecto.KB030862.1                               5838383 6 -  28871421 -t-ag-tt-t
i Pteropus_alecto.KB030862.1                             I 4 C 0
s Pteropus_vampyrus.KN525825.1                             3534944 6 -   4952924 -t-ag-tt-t
i Pteropus_vampyrus.KN525825.1                           I 4 C 0
s Puma_concolor.QAVW01001104.1                            18096070 7 +  38429054 tt-ga-tt-t
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             23819 8 +     91421 tt-ta-tttc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150312 8 -   7812017 tt-ta-tttc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4689 8 +     72585 tt-ta-tttc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911026 6 +   3329780 -t-at-tt-t
i Rhinolophus_sinicus.LVEH01000134.1                     I 4 C 0
s Rhinopithecus_bieti.k119_221883                            25649 8 +     27361 tt-ta-tttc
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104118997 8 + 195417433 tt-ta-tttc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233257 8 -   7961872 tt-ta-tttc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72392 6 -    116970 -t-ag-tt-t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 4 C 0
s Saguinus_bicolor.k141_1429097                               1096 8 +     27962 tt-ta-tttc
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1102 8 +      6077 tt-ta-tttc
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1123 8 +      5971 tt-ta-tttc
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1178 8 +      5932 TT-TA-TTTC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1324 8 -      2099 tt-ta-ttta
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388441 8 - 209938924 tt-ta-tttc
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1125 8 +      5979 TT-TA-TTTC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1501 8 -      4301 tt-ta-tttc
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235574 8 +   5703754 tt-ta-tttc
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5164 8 +     21866 tt-ta-tttc
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113296 7 +    313613 tt-ca-tt-t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22136 8 +     27374 tt-ta-tttc
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25655 8 +     58920 tt-ta-tttc
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12151 8 -     45317 tt-ta-tttc
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19809 8 -     42441 tt-ta-tttc
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22489 8 -     29113 tt-ta-tttc
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25558 8 -     48123 tt-ta-tttc
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855965 7 -   1910179 tt-ca-ct-t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 8
s Spilogale_gracilis.SpiGra_flattened_line_13525              3710 7 -     97271 at-ca-tt-t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629             121740 7 +    196729 tt-gg-tt-t
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Symphalangus_syndactylus.tarseq_199                       387727 8 +   1523678 tt-ta-tttc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_547924                 652 6 -      1028 -T-AG-TT-T
i Tadarida_brasiliensis.TadBra_scaffold_547924           I 82 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188358 7 +    199430 tt-ca-tt-t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    102313 7 -    539355 tt-ca-tt-t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Theropithecus_gelada.CM009954.1                           350016 8 - 186847797 tt-ta-tttc
i Theropithecus_gelada.CM009954.1                        I 2 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477230 6 -    610378 -T-AG-TT-T
i Tonatia_saurophila.TonSau_scaffold_294                 I 4 C 0
s Trachypithecus_auratus.k141_1189070                        17702 8 +     26378 tt-ta-tttc
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30384 8 -     78344 tt-ta-tttc
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17023 8 +     25722 tt-ta-tttc
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25246 8 -     62838 tt-ta-tttc
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25363 8 +     46913 tt-ta-tttc
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6171 8 -     28527 tt-ta-tttc
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27185 8 -     64340 tt-ta-tttc
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25222 8 -     63452 tt-ta-tttc
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6665 8 +     22490 tt-ta-tttc
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                           94 8 -      6147 tt-ta-tttc
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7089 8 -     13050 tt-ta-tttc
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252326 8 -   6242583 tt-ta-tttc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58057 8 +     59866 tt-ta-tttc
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830300 8 -   4065304 tt-ga-tttc
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4852 8 -     70247 TT-GA-TTTC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104528 7 -    105689 CT-CA-TT-T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178599 7 +   5085361 ag-ca-tt-t
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_787544                                  22314 8 -     30710 tt-tc-tttc
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21221 8 -    147434 tt-cc-tttc
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102032 7 -    112863 tt-ca-tt-t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 192
s Zalophus_californianus.ZalCal_flattened_line_17732         25873 7 -     86975 tt-ca-tt-t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
e Loris_tardigradus.ctg83                                  5036753 3543 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            3094 3543 +     19643 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17338 56 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107666 50 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10335 52 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tarsius_wallacei.k141_226975                                4353 0 +     20590 C
e Tarsius_lariang.k141_1780720                                4314 0 +      6850 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 219 58 +      5583 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117101 58 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Cephalopachus_bancanus.k141_72622                            791 0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Carlito_syrichta.NW_007259797.1                           267622 0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1405 1 +     36723 T
s Acinonyx_jubatus.LLWD01001279.1                           809816 1 +   1699592 t
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412083 1 +  29979442 t
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44692 1 +     53615 t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40515 1 +     44087 t
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13219 1 -     21945 t
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14897 1 +     32033 t
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69448 1 -     84148 t
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41677 1 -     78289 t
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41127 1 +     55831 t
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39565 1 -     64179 t
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21211 1 -     24835 t
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38194 1 +     45454 t
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43893 1 +     70886 t
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6017 1 +     30854 t
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30156 1 +     42133 t
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174201 1 -    412891 t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   47973 1 -     65372 t
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41718 1 +     43593 t
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669731 1 +   5030052 t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21373 1 -     23494 t
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6509 1 +      8415 t
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16559 1 -     45910 t
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2488 1 -     15198 t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               271955 1 +  21539123 t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8123 1 +     48076 t
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3259 1 -     28759 t
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30812 1 +     44353 t
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46184 1 -     71267 t
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20243 1 -     33135 t
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3377 1 +     11645 t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3378 1 -     19611 t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5152 1 +     28062 g
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40446 1 -     91139 g
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17972 1 +     95584 g
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17885 1 +    119600 g
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7375 1 +     18648 t
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7048 1 -     13885 t
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15736 1 +     17162 t
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450691 1 + 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16984 1 -     18408 t
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502579 1 +  60362399 t
i CanFam4.chr16                                          I 192 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6209 1 -     23171 t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 192 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219570 1 +   9314153 t
i Canis_lupus_dingo.QKWQ01000480.1                       I 192 C 0
s Canis_lupus_familiaris.chr16                            41612695 1 +  59632846 t
i Canis_lupus_familiaris.chr16                           I 192 C 0
s Canis_lupus_orion.HG994398.1                            45104265 1 -  63665305 t
i Canis_lupus_orion.HG994398.1                           I 192 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2560 1 +      5315 T
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cebuella_niveiventris.k141_592277                           2270 1 -     12580 t
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40156 1 +     53515 t
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368359 1 -  26074798 t
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5248 1 -     34880 t
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64343 1 -     89041 t
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489332 1 -  27778364 t
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16165 1 +     27315 t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 1 C 0
s Cercocebus_atys.KQ010504.1                                137854 1 -   4669795 t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41594 1 +     47900 t
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41427 1 -     44860 t
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41410 1 -    148725 t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24473 1 -     40656 t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4409 1 +     20796 t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8665 1 -     17524 t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24353 1 -     34525 t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9063 1 -     25376 t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361629 1 -  39242232 t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267373 1 +  21565898 t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28829 1 -     45857 t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24618 1 -     32606 t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          804 1 +      8499 t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22322 1 +     70610 t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19182 1 +     36323 t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             27804 1 -     33796 t
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1991 1 -     15404 t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6246 1 -     32913 t
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16659 1 -     40346 t
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16923 1 +    216457 t
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16707 1 +     39636 t
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1106 1 +      5346 t
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39792 1 -    112038 t
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5364 1 +     34062 t
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340078 1 +  18827391 t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6689 1 -     44032 t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301404 1 - 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405961 1 -   2368649 t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375124 1 - 200372422 c
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5848 1 -      6605 t
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804566 1 +  53390261 t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           238 1 -      8242 T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1050 1 +     87169 t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Daubentonia_madagascariensis.ctg71                        289813 1 +  12879189 t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862232 1 -  20541912 t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661616 1 -   1390856 t
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136409 1 -    198055 t
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Echinops_telfairi.JH980293.1                            62850818 1 - 111700974 C
i Echinops_telfairi.JH980293.1                           C 0 I 44
s Eidolon_helvum.AWHC01266696.1                               3797 1 +     19438 t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105052 1 -  10337057 a
i Elephantulus_edwardii.JH947257.1                       C 0 I 8
s Enhydra_lutris.KZ291758.1                               24913122 1 +  41312741 t
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Equus_asinus.JREZ01000139.1                              3038598 1 -   4378816 t
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               21372532 1 +  39960074 t
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.KK951119.1                              409318 1 -    498745 t
i Equus_przewalskii.KK951119.1                           I 1 C 0
s Erythrocebus_patas.Contig38                               259636 1 +  21539334 t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243481 1 - 206538554 t
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                          185113263 1 - 205367284 t
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24611 1 -     30238 t
i Felis_nigripes.FelNig_flattened_line_31944             I 1 C 0
s Galago_moholi.ctg3793                                     120635 1 -    137831 t
i Galago_moholi.ctg3793                                  C 0 I 7
s Galago_senegalensis.k141_991736                             4176 1 +     22493 t
i Galago_senegalensis.k141_991736                        C 0 I 7
s Galagoides_demidoff.k141_561628                            17651 1 +     32986 T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16226 1 +     18121 t
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1768 1 -      8343 t
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251258 1 - 186649187 t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27588 1 -    327341 t
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547684 1 -   1711038 t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47000 1 +     49977 t
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    139152 1 -    630532 t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66044 1 +     83186 t
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1 C 0
s Hylobates_agilis.k141_1155965                               2186 1 +     12352 t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9369 1 +     55766 t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048707 1 + 191637585 t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798039 1 +  11177569 t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     870 1 -      1527 t
i Indri_indri.k141_4600452                               C 0 I 53
s Lagothrix_lagothricha.k141_246028                          40500 1 +    110728 t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1187 1 -     13097 t
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1138 1 +      5940 T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         769 1 -      5717 t
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7409 1 -     11567 t
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8790 1 -     12945 t
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6164 1 +     29618 t
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6161 1 +     31569 t
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6165 1 +     16388 t
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810478 1 -   3914936 t
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lophocebus_aterrimus.ctg367                               329810 1 -   1826925 t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                41611850 1 +  59628241 t
i Lycaon_pictus.CM007581.1                               I 192 C 0
s Macaca_arctoides.k141_1757516                              42092 1 -     61512 t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369720 1 -  60120075 t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22040 1 +     30207 t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19143 1 -     24934 t
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21926 1 +     30527 t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33116 1 -     50087 t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42854 1 +     51645 t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411428 1 - 187317192 t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396311 1 +  25927173 t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45442 1 -     62418 t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22130 1 +     24253 t
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41887 1 +     59329 t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267719 1 +    668171 t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19065 1 +     21031 t
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32798 1 +     33478 t
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220759 1 -    270270 t
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319195 1 +  24302211 t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354027 1 -    752769 t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670695 1 -    737560 t
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                             217987 1 +    317179 t
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       147940 1 +    207569 t
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             22991 1 -     74585 t
i Mellivora_capensis.MelCap_flattened_line_19308         I 1 C 0
s Mico_argentatus.k141_582562                                 7147 1 +     17804 t
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7931 1 -     12984 t
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15882 1 -     26561 t
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981773 1 +  93316391 T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41133 1 +    145209 c
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 44
s Micronycteris_hirsuta.MicHir_scaffold_2233                182175 1 +    200668 t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19187 1 -     27822 t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5487 1 +     27589 t
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 1 C 0
s Mirza_zaza.k141_766280                                     49631 1 -     62432 t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176352 1 +    366855 t
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15342 1 -     63510 t
i Mungos_mungo.MunMun_flattened_line_18455               I 1 C 0
s Mustela_putorius.JH418006.1                             14351926 1 +  14710649 t
i Mustela_putorius.JH418006.1                            I 1 C 0
s Nasalis_larvatus.k141_1350636                              25802 1 +     34575 t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465873 1 -  31847680 t
i Neomonachus_schauinslandi.NINY01007730.1               I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125003 1 -    149072 T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           50448 1 -    132029 t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6544 1 -     16345 t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12429 1 +     22201 t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410764 1 -  22158432 t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22827 1 -     54323 t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195468 1 +   9404916 t
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 195 C 0
s Odobenus_rosmarus.KB229312.1                             1448660 1 +   2017862 t
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              10559 1 -     14239 c
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 8
s Otocyon_megalotis.JAEUCK010005147.1                        36507 1 +    559221 t
i Otocyon_megalotis.JAEUCK010005147.1                    I 192 C 0
s Otolemur_crassicaudatus.k141_649260                        35766 1 -     51505 t
i Otolemur_crassicaudatus.k141_649260                    C 0 I 7
s Otolemur_garnettii.GL873799.1                             348781 1 +   1103335 t
i Otolemur_garnettii.GL873799.1                          C 0 I 7
s Pan_troglodytes.CM009242.2                               1468647 1 - 189151597 t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21201 1 -    230217 t
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                              18458527 1 -  18783137 t
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               3969252 1 +   8748460 t
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                   240038 1 - 183742232 t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6504 1 +     21308 t
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287541 1 -  20919399 t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19157 1 -     27687 t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12293 1 +     16796 t
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19103 1 -     23640 t
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12115 1 +     78924 t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_1921260                          22003 1 +     31479 t
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14373 1 -     24908 t
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5952 1 +      7560 t
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61659 1 -     63152 t
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44258 1 +     45295 t
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1937 1 +      5735 t
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62141 1 +    207309 t
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3261 1 -     25401 t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28976 1 +     58159 t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29252 1 +     63561 t
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29015 1 +     51148 t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554008 1 -   4542175 t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           28999 1 +     51125 t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5420 1 +     39866 t
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           507 1 -      9282 t
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39908 1 -     87950 t
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40301 1 -     88961 t
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5000 1 -     39403 t
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39954 1 +     87928 t
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4998 1 -     60166 t
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11934 1 -     67232 t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39850 1 -     90634 t
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41318 1 +     89403 t
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174270 1 - 189387572 t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189268 1 -   9816681 t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24436 1 +     69807 t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41631 1 -     80239 t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563253 1 -   2598838 t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            890 1 -      7103 t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1487 1 -     11706 t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5222 1 -     30655 t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31547 1 +     46564 t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91818 1 -     98465 t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5457 1 +     35169 t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49418 1 -     66298 t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1713 1 -     18639 t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 1 C 0
s Pteropus_alecto.KB030862.1                               5838389 1 -  28871421 t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3534950 1 -   4952924 t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096078 1 +  38429054 t
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             23827 1 +     91421 t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150320 1 -   7812017 t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4697 1 +     72585 t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911032 1 +   3329780 t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            25657 1 +     27361 t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119005 1 + 195417433 t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233265 1 -   7961872 t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72398 1 -    116970 t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1104 1 +     27962 t
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1110 1 +      6077 t
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1131 1 +      5971 t
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1186 1 +      5932 T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1332 1 -      2099 t
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388449 1 - 209938924 t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1133 1 +      5979 T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1509 1 -      4301 t
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235582 1 +   5703754 t
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5172 1 +     21866 t
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113303 1 +    313613 t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22144 1 +     27374 t
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25663 1 +     58920 t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12159 1 -     45317 t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19817 1 -     42441 t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22497 1 -     29113 t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25566 1 -     48123 t
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855980 1 -   1910179 t
i Solenodon_paradoxus.SolPar_flattened_line_126          I 8 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3718 1 -     97271 t
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121748 1 +    196729 t
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Symphalangus_syndactylus.tarseq_199                       387735 1 +   1523678 t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_547924                 658 1 -      1028 T
i Tadarida_brasiliensis.TadBra_scaffold_547924           C 0 n 0
s Tapirus_indicus.TapInd_scaffold_7432                      188366 1 +    199430 t
i Tapirus_indicus.TapInd_scaffold_7432                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102321 1 -    539355 t
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Theropithecus_gelada.CM009954.1                           350024 1 - 186847797 t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477236 1 -    610378 T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        17710 1 +     26378 t
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30392 1 -     78344 t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17031 1 +     25722 t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25254 1 -     62838 t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25371 1 +     46913 t
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6179 1 -     28527 t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27193 1 -     64340 t
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25230 1 -     63452 t
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6673 1 +     22490 t
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          102 1 -      6147 t
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7097 1 -     13050 t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252334 1 -   6242583 t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58065 1 +     59866 t
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830308 1 -   4065304 t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       4860 1 -     70247 T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104535 1 -    105689 T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178607 1 +   5085361 t
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_787544                                  22322 1 -     30710 t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21229 1 -    147434 t
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102231 1 -    112863 t
i Vulpes_lagopus.VulLag_flattened_line_12041             I 192 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25881 1 -     86975 t
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560155 0 - 199412804 C
e Nycticebus_coucang.k141_8166032                             1290 0 +      2758 C
e Nycticebus_bengalensis.LG01                             93631901 0 + 196305487 C
e Loris_tardigradus.ctg83                                  5036753 3543 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            3094 3543 +     19643 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17338 56 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107666 50 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10335 52 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tarsius_wallacei.k141_226975                                4353 0 +     20590 C
e Tarsius_lariang.k141_1780720                                4314 0 +      6850 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 219 58 +      5583 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117101 58 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lepilemur_ruficaudatus.k141_330196                          6173 0 +     24756 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Cephalopachus_bancanus.k141_72622                            791 0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Carlito_syrichta.NW_007259797.1                           267622 0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1406 53 +     36723 AT-TTT-CT-AT-G-T-TCCTT-AC---TGAGTTTTCT-AAAGTCTGTTTT-AATTTCTCTACTT
s Acinonyx_jubatus.LLWD01001279.1                           809817 12 +   1699592 ct-cct-ct-at-a-t-t-----------------------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412084 12 +  29979442 at-act-ct-tt-g-c-t-----------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   44693 53 +     53615 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtactt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40516 53 +     44087 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtactt
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13220 53 -     21945 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtactt
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14898 53 +     32033 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtactt
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69449 48 -     84148 at-ttt-ct-gt-g-t-tcctt-ac---tgtgttgtct-aaagtctc--tt-aatctctgta---
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41678 48 -     78289 at-ttt-ct-at-g-t-tcctt-ac---tgtgttgtct-aaagtctc--tt-aatctctgta---
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41128 48 +     55831 at-ttt-ct-at-g-t-tcctt-ac---tgtgttgtct-aaagtctc--tt-aatctctgta---
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39566 48 -     64179 at-ttt-ct-gt-g-t-tcctt-ac---tgtgttgtct-aaagtctc--tt-aatctctgta---
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21212 48 -     24835 at-ttt-ct-at-g-t-tcctt-ac---tgtgttgtct-aaagtctc--tt-aatctctgta---
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38195 48 +     45454 at-ttt-ct-at-g-t-tcctt-ac---tgtgttgtct-aaagtctc--tt-aatctctgta---
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43894 48 +     70886 at-ttt-ct-at-g-t-tcctt-ac---tgtgttgtct-aaagtctc--tt-aatgtctgta---
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6018 48 +     30854 at-ttt-ct-at-g-t-tcctt-ac---tgtgttgtct-aaagtctc--tt-aatctctgta---
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30157 48 +     42133 at-ttt-ct-at-g-t-tcctt-ac---tgtgttgtct-aaagtctc--tt-aatctctgta---
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174202  8 -    412891 tc-ctt-ct-a------------------------------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 98
s Aotus_azarae.k141_118258                                   47974 50 -     65372 at-tgt-cc-at-g-t-tcctt-ac---tgtgttttct-aaagtctc--tt--atctctatactt
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41719 50 +     43593 at-ttt-cc-at-g-t-tcctt-ac---tgtgttttct-aaagtctc--tt--atctctatactt
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669732 50 +   5030052 at-ttt-cc-at-g-t-TCCTT-AC---TGTGTTTTCT-AAAGTCTC--TT--ATCTCTATACTT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21374 50 -     23494 at-ttt-cc-at-g-t-tcctt-ac---tgtgttttct-aaagtctc--tt--atctctatactt
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6510 50 +      8415 at-ttt-cc-at-g-t-tcctt-ac---tgtgttttct-aaagtctc--tt--atctctatactt
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16560 54 -     45910 at-ttttct-gc-a-t-tcctt-tc---tgtgttttct-caaagctcttcc-catctctgtattt
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2489  8 -     15198 tc-ctt-ct-a------------------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 96
s Ateles_geoffroyi_b.tarseq_1536                               271956 48 +  21539123 gt-ttt-ct-at-t-t-tcctt-tc---tgtgttttct-aaagtctc--tt-aatctctgta---
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8124 48 +     48076 at-ttt-ct-at-t-t-tcctt-tc---tgtgttttct-aaagtctc--tt-aatctctgta---
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3260 48 -     28759 gt-ttt-ct-at-t-t-tcctt-tc---tgtgttttct-aaagtctc--tt-aatctctgta---
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30813 48 +     44353 gt-ttt-ct-at-t-t-tcctt-tc---tgtgttttct-aaagtctc--tt-aatctctgta---
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46185 48 -     71267 at-ttt-ct-at-t-t-tcctt-tc---tgtgttttct-aaagtctc--tt-aatctctgta---
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20244 48 -     33135 at-ttt-ct-at-t-t-tcctt-tc---tgtgttttct-aaagtctc--tt-aatctctgta---
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3378 53 +     11645 at-cct-ct-at-g-t-tcttt-ac---tgtgttttct-aaaatctctgtt-cgtctctgtcctt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3379 53 -     19611 at-cct-ct-at-g-t-tcttt-ac---tgtgttttct-aaaatctctgtt-cgtctctgtcctt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5153 48 +     28062 at-ttt-ct-at-g-t-tc-tt-ac---tgt--tttct-aaagtctc--tt-aatctctgtgctt
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40447 48 -     91139 at-ttt-ct-at-g-t-tc-tt-ac---tgt--tttct-aaagtctt--tt-aatctctgtgctt
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  17973 48 +     95584 at-ttt-ct-at-g-t-tc-tt-ac---tgt--tttct-aaagtctc--tt-aatctctgtgctt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17886 48 +    119600 at-ttt-ct-at-g-t-tc-tt-ac---tgt--tttct-aaagtctc--tt-aatctctgtgctt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7376 51 +     18648 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-gaagtctc--tt-aatctctgtactt
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7049 51 -     13885 gt-ttt-cc-at-g-t-tcctt-cc---tgtgttttct-aaagtctc--tt-aatctctgtactt
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15737 51 +     17162 at-ttt-ct-at-g-t-tcctt-ac---tgtgtcttct-gaagtctc--tt-aatctctgtactt
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450692 51 + 189096842 AT-TTT-CT-AT-G-T-TCCTT-AC---TGTGTCTTCT-GAAGTCTC--TT-AATCTCTGTACTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              16985 51 -     18408 at-ttt-ct-at-g-t-tcctt-ac---tgtgtcttct-gaagtctc--tt-aatctctgtactt
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267622 25 +    496798 -------------------------------------c-aagatctttttt-c-tttttgtatat
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s CanFam4.chr16                                           42502580 12 +  60362399 at-cct-ct-at-a-t-t-----------------------------------------------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6210 12 -     23171 at-cct-ct-at-a-t-t-----------------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219571 12 +   9314153 at-cct-ct-at-a-t-t-----------------------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41612696 12 +  59632846 at-cct-ct-at-a-t-t-----------------------------------------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104266 12 -  63665305 at-cct-ct-at-a-t-t-----------------------------------------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2561  8 +      5315 TC-CCC-CT-A------------------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 95
s Cebuella_niveiventris.k141_592277                           2271 51 -     12580 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-gaagtctc--tt-aatctctgtactt
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40157 51 +     53515 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-gaagtctc--tt-aatctctgtactt
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368360 51 -  26074798 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtgtc--ttaa-tctctgtattt
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5249 51 -     34880 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtgtc--ttaa-tctctgtattt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64344 51 -     89041 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtgtc--ttaa-tctctgtattt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            791 25 -      1636 -------------------------------------C-AAGATCTTTTTT-C-TTTTTGTATAT
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489333 12 -  27778364 at-cct-ct-at-g-t-t-----------------------------------------------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16166 12 +     27315 at-cct-ct-at-g-t-t-----------------------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137855 53 -   4669795 at-ttt-ct-at-g-t-tCCTT-AC---TGTGTTTTCT-AAAGtctctttt-aatttctgtacTT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41595 53 +     47900 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41428 53 -     44860 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41411 53 -    148725 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24474 53 -     40656 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtacta
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4410 53 +     20796 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtacta
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8666 53 -     17524 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtacta
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24354 53 -     34525 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttttgtacta
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9064 53 -     25376 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtacta
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361630 53 -  39242232 gt-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtacta
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267374 53 +  21565898 at-ttt-ct-gt-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtacta
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28830 53 -     45857 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctttttt-aatttctgtacta
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24619 53 -     32606 gt-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtacta
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          805 53 +      8499 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtacta
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22323 53 +     70610 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtactt
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19183 53 +     36323 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtacta
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10387  8 -     19938 A-AGTT-CG-T------------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 52 I 25
s Cheirogaleus_major.k141_666340                             27805 54 -     33796 at-ctt-ct-at-g-t-ccttttac---tgtgttttct-aaaatctctttt-catctctgtcctt
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             1992 54 -     15404 at-ctt-ct-at-g-t-tcttttac---tgtgttttct-aaaatctctttt-catctctgtcctt
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6247 51 -     32913 at-ttt-ct-at-g-c-tcctt-ac---tgtgttttct-aaagtctc--tt-aatctctgtactt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16660 51 -     40346 at-ttt-ct-at-g-c-tcctt-ac---tgtgttttct-aaagtctc--tt-aatctctgtactt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16924 51 +    216457 at-ttt-ct-at-g-c-tcctt-ac---tgtgttttct-gaagtctc--tt-aatctctgtactt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16708 51 +     39636 at-ttt-ct-at-g-c-tcctt-ac---tgtgttttct-aaagtctc--tt-aatctctgtactt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1107 51 +      5346 at-ttt-cg-at-g-t-tc-ct-tcctgtgt--tttct-gaagtctc--ct-aatctctgtactt
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39793 48 -    112038 at-ttt-ct-ac-a-t-tc-tt-ac---tgt--tttct-aaagtctc--tt-aatctctgtgctt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5365 48 +     34062 at-ttt-ct-ac-a-t-tc-tt-ac---tgt--tttct-aaagtctc--tt-aatctctgtgctt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340079 53 +  18827391 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtactt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6690 53 -     44032 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgtactt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301405 53 - 135778131 at-ttt-ct-at-g-t-tcCTT-AC---TGTATTTTCT-GAAGtctctttt-aatttctgtacTT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             405962 53 -   2368649 at-ttt-ct-at-g-t-tCCTT-AC---TGTGTTTCCT-AAAGTCTCTCTT-AATTTCTGTACTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375125 53 - 200372422 at-ttt-ct-at-g-t-tcctt-ac---ggtgtttcct-aaagtctctttt-aatttctgtactt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5849 53 -      6605 at-ttt-ct-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctctt-aatttctgtactt
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804567 13 +  53390261 ct-gtt-gc-at-AAT-G-----------------------------------------------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           239  9 -      8242 TTTTAA-AT-A------------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 100
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1051 12 +     87169 ct-tct-ct-at-a-t-t-----------------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2107716  8 -   2246927 A-AGTC-CC-T------------------------------------------------------
i Dasypus_novemcinctus.JH564415.1                        I 50 I 24
s Daubentonia_madagascariensis.ctg71                        289814 53 +  12879189 at-ctt-ct-at-g-t-tcctt-gc---tgtgttttct-aaaatctctttt-catctctgtactt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862233  8 -  20541912 tc-ttt-ct-a------------------------------------------------------
i Desmodus_rotundus.KZ672289.1                           C 0 I 96
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661617 12 -   1390856 at-cct-ct-at-g-t-t-----------------------------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136410 12 -    198055 at-cat-ct-gt-g-t-t-----------------------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            62850863 12 - 111700974 GT-GCC-TT-TT-G-G-T-----------------------------------------------
i Echinops_telfairi.JH980293.1                           I 44 C 0
s Eidolon_helvum.AWHC01266696.1                               3798  6 +     19438 t---tt-at-c------------------------------------------------------
i Eidolon_helvum.AWHC01266696.1                          C 0 I 93
s Elephantulus_edwardii.JH947257.1                         9105061  9 -  10337057 gt-gtt-tc-ta-----------------------------------------------------
i Elephantulus_edwardii.JH947257.1                       I 8 C 0
s Enhydra_lutris.KZ291758.1                               24913123 12 +  41312741 at-cct-ct-gt-a-t-t-----------------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              3038599 12 -   4378816 at-cct-ct-gt-g-t-t-----------------------------------------------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21372533 12 +  39960074 at-cct-ct-at-g-t-t-----------------------------------------------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409319 12 -    498745 at-cct-ct-at-g-t-t-----------------------------------------------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               259637 50 +  21539334 at-ttc-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttctgta---
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galago_moholi.ctg3793                                     120643 34 -    137831 -----------------------------gtgttttct-aaaagctcttcc-cttctctgtatat
i Galago_moholi.ctg3793                                  I 7 C 0
s Galago_senegalensis.k141_991736                             4184 34 +     22493 -----------------------------gtgttttct-aaaagctcttcc-cttctttgtatat
i Galago_senegalensis.k141_991736                        I 7 C 0
s Felis_catus.CM001381.2                                 186243482 12 - 206538554 ct-cct-ct-at-a-t-t-----------------------------------------------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185113264 12 - 205367284 ct-cct-ct-at-a-t-t-----------------------------------------------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24612 12 -     30238 ct-cct-ct-at-a-t-t-----------------------------------------------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galagoides_demidoff.k141_561628                            17652  7 +     32986 AT-TTT-CT--------------------------------------------------------
i Galagoides_demidoff.k141_561628                        C 0 T 17509
s Galeopterus_variegatus.GalVar_scaffold_74466               16227 53 +     18121 at-ttt-ct-at-g-t-ttctt-ac---tatactttct-ctaatctcttct-tatctctgttctt
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 67
s Gorilla_beringei.k141_3358147                               1769 53 -      8343 at-ttt-ct-at-g-t-tcctt-ac---tgagttttct-aaagtctgtttt-aatttctctactt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251259 53 - 186649187 at-ttt-ct-at-g-t-tcctt-ac---tgagttttct-aaagtctgtttt-aatttctctactt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27589 12 -    327341 ct-cct-ct-at-a-t-t-----------------------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547685  8 -   1711038 tt-ctt-at-a------------------------------------------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 105
s Hipposideros_galeritus.HipGal_scaffold_23202               47001  8 +     49977 tt-ctt-ac-a------------------------------------------------------
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 105
s Hoolock_leuconedys.ctg274                                    139153 53 -    630532 at-ttt-ct-at-g-t-tcttt-ac---tgtgttttct-aaagtctctttt-aatttttgtactt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66045 12 +     83186 ct-cct-ct-at-g-t-t-----------------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               2187 53 +     12352 at-ttt-ct-gt-g-t-tcctt-ac---tgtgttttct-acagtctttttt-aatttctatactt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9370 53 +     55766 at-ttt-ct-gt-g-t-tcctt-ac---tgtgttttct-agagtctttttt-aatttctatactt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048708 53 + 191637585 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798040 53 +  11177569 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_1634743                                    1137 53 -      1784 at-ctt-ct-at-g-t-tcttt-ac---tgtgttttct-aaaatctctgtt-catctctgtcctt
i Indri_indri.k141_1634743                               I 31 I 228
s Lagothrix_lagothricha.k141_246028                          40501 48 +    110728 at-ttt-ct-at-t-t-tcctt-ac---tgtgttttct-aaagtctc--tt-aatctctgta---
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1188 51 -     13097 at-ttt-CG-AT-G-T-TCTTT-CC---TGTGTTTTCT-AAAGTCTC--CT-AATCTCTGTACTT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1139 51 +      5940 AT-TTT-CG-AT-G-T-TCCTT-CC---TGTGTTTTCT-AAAGTCTC--CT-AATCTCTGTACTT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         770 51 -      5717 at-ttt-tg-at-g-t-tcctt-cc---tgtgttttct-aaagtctc--ct-aatctctgtactt
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7410 51 -     11567 at-ttt-ct-at-g-t-tcttt-cc---tgtgttttct-gaagtctc--tt-aatctctgtactt
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8791 51 -     12945 at-ttt-ct-at-g-t-tcttt-cc---tgtgttttct-gaagtctc--tt-aatctctgtactt
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6165 53 +     29618 at-ctt-ct-at-g-t-ccttt-aa---tgtgttttct-aaaatctctttt-cgtctttgtcctt
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6162 53 +     31569 at-ctt-ct-at-g-t-ccttt-aa---tgtgttttct-aaaatctctttt-cgtctttgtcctt
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6173 53 +     24756 gt-ctt-ct-at-g-t-ccttt-ac---tgtgttttct-aaaatctctttt-cgtctttgtcctt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6166 53 +     16388 at-ctt-ct-at-g-t-ccttt-aa---tgtgttttct-aaaatctctttt-cgtctttgtcctt
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810479 12 -   3914936 at-cct-ct-gt-a-t-t-----------------------------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               329811 53 -   1826925 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            6637 26 +     19643 -------------------------------------t-aaaagctcctcc-catctctgtattt
i Loris_lydekkerianus.k141_2031736                       I 3543 C 0
s Loris_tardigradus.ctg83                                  5040296 26 -   6120653 -------------------------------------t-aaaagctcctcc-catctctgtattt
i Loris_tardigradus.ctg83                                I 3543 C 0
s Lycaon_pictus.CM007581.1                                41611851 12 +  59628241 at-ctt-ct-at-a-t-t-----------------------------------------------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42093 53 -     61512 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369721 53 -  60120075 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22041 53 +     30207 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19144 53 -     24934 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21927 53 +     30527 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33117 53 -     50087 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42855 53 +     51645 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411429 53 - 187317192 at-ttt-ct-at-g-t-tCCTT-AC---TGTGTTTTCT-AAAGTCTCTTTT-AATTTCTGTACTT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396312 53 +  25927173 at-ttt-ct-at-g-t-tcCTT-AC---TGTGTTTTCT-AAAGtctctttt-aatttctgtacTT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45443 53 -     62418 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22131 53 +     24253 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41888 51 +     59329 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctt---aatttctgtactt
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267720 53 +    668171 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19066 53 +     21031 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32799 53 +     33478 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220760  8 -    270270 tt-ctt-at-c------------------------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 95
s Mandrillus_leucophaeus.scaffold280                        319196 53 +  24302211 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354028 53 -    752769 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670696 13 -    737560 at-ctt-cc-at-g-ttt-----------------------------------------------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             217988 12 +    317179 at-ctt-cc-tt-g-t-t-----------------------------------------------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       147941  7 +    207569 t--ctt-at-a------------------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 106
s Mellivora_capensis.MelCap_flattened_line_19308             22992 12 -     74585 at-cct-ct-gt-a-t-t-----------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mico_argentatus.k141_582562                                 7148 51 +     17804 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-gaagtctc--tt-aatctctgtactt
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               7932 51 -     12984 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-gaagtctc--tt-aatctctgtactt
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     15883 51 -     26561 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-gaagtctc--tt-aatctctgtactt
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981774 53 +  93316391 AT-CTT-CT-AT-G-T-TCTTT-AC---TGTGTTTCCT-AAAATCTCTTTT-CATCTCTGTCCTT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41178 12 +    145209 gt-gct-tt-tt-g-g-t-----------------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                I 44 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182176  8 +    200668 tc-ctt-ct-a------------------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 96
s Miopithecus_ogouensis.k141_1534655                         19188 53 -     27822 at-ttt-ct-at-g-t-tcctt-ac---tgtattttct-aaagtctctttt-aatttccgtactt
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5488 12 +     27589 at-cct-ct-gt-a-t-t-----------------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     49632 53 -     62432 at-ctt-ct-at-g-t-tcttt-ac---tgtgtttcct-aaaatctctttt-catctctgtgttt
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176353  8 +    366855 tc-ctt-ct-a------------------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 96
s Mungos_mungo.MunMun_flattened_line_18455                   15343 12 -     63510 ct-cct-ct-at-a-t-t-----------------------------------------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mustela_putorius.JH418006.1                             14351927 12 +  14710649 at-tct-ct-gt-a-t-t-----------------------------------------------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117159  8 +    130748 A-AGTG-CC-T------------------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 58 I 24
s Nasalis_larvatus.k141_1350636                              25803 52 +     34575 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465874 12 -  31847680 at-cct-ct-gt-a-t-t-----------------------------------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125004  8 -    149072 TC-CTT-CT-A------------------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 93
s Nomascus_annamensis.k141_1771965                           50449 53 -    132029 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttttgtactt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6545 53 -     16345 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttttgtactt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12430 53 +     22201 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttttgtactt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410765 53 -  22158432 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttttgtactt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22828 53 -     54323 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttttgtactt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195469 12 +   9404916 at-cct-ct-at-a-t-t-----------------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93631901 46 + 196305487 ----------gt-g-t-tcctt-tc---tgtgttttct-aaaagctcctcc-catctctgtattt
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1290 46 +      2758 ----------gt-g-t-tcctt-tc---tgtgttttct-aaaagctcctcc-catctctgtattt
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560155 46 - 199412804 ----------gt-g-t-tcctt-tc---tgtgttttct-aaaagctcctcc-catctctgtattt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        35774 34 -     51505 -----------------------------gtgttttct-aaaagctcttcc-catctctgtatat
i Otolemur_crassicaudatus.k141_649260                    I 7 C 0
s Otolemur_garnettii.GL873799.1                             348789 34 +   1103335 -----------------------------gtgttttct-aaaagCTCTTCC-CATCTCTGTATAT
i Otolemur_garnettii.GL873799.1                          I 7 C 0
s Odobenus_rosmarus.KB229312.1                             1448661 12 +   2017862 at-cct-ct-gt-a-t-t-----------------------------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              10568 12 -     14239 gt-gtt-cc-tt-a-c-t-----------------------------------------------
i Orycteropus_afer.OryAfe_flattened_line_171931          I 8 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36508 12 +    559221 at-cct-ct-at-a-t-t-----------------------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_troglodytes.CM009242.2                               1468648 53 - 189151597 at-ttt-ct-at-g-t-tcCTT-AC---TGAGTTTTCT-AAagtctgtttt-aatttctctacTT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21202 12 -    230217 ct-cct-ct-gt-a-t-t-----------------------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18458528 12 -  18783137 ct-cct-ct-gt-a-t-t-----------------------------------------------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3969253 12 +   8748460 ct-cct-ct-gt-a-t-t-----------------------------------------------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240039 53 - 183742232 at-ttt-ct-at-g-t-tccTT-AC---TGTGTTTTCT-AAAGTCTCTTTT-AATTTCTGTACTT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6505 51 +     21308 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-a--gtctctttt-aatttctgtactt
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287542 53 -  20919399 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19158 53 -     27687 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12294 53 +     16796 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19104 53 -     23640 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtctctttt-aatttctgtactt
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12116  7 +     78924 -------tt-at-a-t-t-----------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22004 53 +     31479 at-ttt-ct-gt-a-t-tcctt-tc---tgtgttttct-caaagctcttcc-catctctgtattt
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14374 53 -     24908 at-ttt-ct-gt-a-t-tcctt-tc---tgtgttttct-caaagctcttcc-catctctgtattt
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            5953 53 +      7560 at-ttt-ct-gt-g-t-tcctt-ac---tgtgtttccg-aaagtctctttt-aatttctgtactt
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61660 53 -     63152 at-ttt-ct-gt-g-t-tcctt-ac---tgtgtttccg-aaagtctctttt-aatttctgtactt
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44259 53 +     45295 at-ttt-ct-gt-g-t-tcctt-ac---tgtgtttccg-aaagtctctttt-aatttctgtactt
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1938 53 +      5735 at-ttt-ct-gt-g-t-tcctT-AC---TGTGTTTCCG-AAAGtctctttt-aatttctgtacTT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62142 48 +    207309 at-ttt-ct-at-g-t-tc-tt-ac---tgt--tttct-aaagtctc--tt-aatctctgtgctt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3262 48 -     25401 at-ttt-ct-at-g-t-tc-tt-ac---tgt--tttct-aaagtctc--tt-aatctctgtgctt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               28977 48 +     58159 at-ttt-ct-at-g-t-tc-tt-ac---tgt--tttct-aaagtctc--tt-aatctctgtgctt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29253 48 +     63561 at-ttt-ct-at-g-t-tc-tt-ac---tgt--tttct-aaagtctc--tt-aatctctgtgctt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29016 48 +     51148 at-ttt-ct-at-g-t-tc-tt-ac---tgt--tttct-aaagtctc--tt-aatctctgtgctt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554009 48 -   4542175 at-ttt-ct-at-g-t-tc-tt-ac---tgt--tttct-aaagtctc--tt-aatctctgtgctt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29000 48 +     51125 at-ttt-ct-at-g-t-tc-tt-ac---tgt--tttct-aaagtctc--tt-aatctctgtgctt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5421 51 +     39866 at-ttt-ct-at-g-c-tcctt-ac---tgtgttttct-aaagtctc--tt-aatctctatactt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           508 51 -      9282 at-ttt-ct-at-g-c-tcctt-ac---tgtgttttct-aaagtctc--tt-aatctctgtactt
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39909 51 -     87950 at-ttt-ct-at-g-c-tcctt-ac---tgtgttttct-aaagtctc--tt-aatctctgtactt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40302 51 -     88961 at-ttt-ct-at-g-c-tcctt-ac---tgtgttttct-aaagtctc--tt-aatctctgtactt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5001 51 -     39403 at-ttt-ct-at-g-c-tcctt-ac---tgtgttttct-aaagtctc--tt-aatctctgtactt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          39955 51 +     87928 at-ttt-ct-at-g-c-tcctt-ac---tgtgttttct-aaagtctc--tt-aatctctgtactt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          4999 51 -     60166 at-ttt-ct-at-g-c-tcctt-ac---tgtgttttct-aaagtctc--tt-aatctctatactt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11935 51 -     67232 at-ttt-ct-at-g-c-tcctt-ac---tgtgttttct-aaagtctc--tt-aatctctatactt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39851 51 -     90634 at-ttt-ct-at-g-c-tcctt-ac---tgtgttttct-aaagtctc--tt-aatctctatactt
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41319 51 +     89403 at-ttt-ct-at-g-c-tcctt-ac---tgtgttttct-aaagtctc--tt-aatctctatactt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174271 53 - 189387572 at-ttt-ct-at-g-t-tCCTT-AC---TGAATTTTCT-AAAGTCTCTTTT-AATTTCTCTACTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189269 53 -   9816681 at-ttt-ct-at-g-t-tcctt-ac---tgaattttct-aaagtctctttt-aatttctctactt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24437 52 +     69807 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41632 52 -     80239 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563254 54 -   2598838 at-cct-ct-AT-G-T-TCTTT-AC---TGTGCTTTCTAAAAATCTCTGTT-CATCTCTGTTCTT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            891 54 -      7103 at-cct-ct-at-g-t-tcttt-ac---tgtgctttctaaaaatctctgtt-catctctgttctt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1488 53 -     11706 at-cct-ct-at-g-t-tcttt-ac---tgtgttttctaaaa-tctctgtt-catctctgtcctt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5223 53 -     30655 at-cct-ct-at-g-t-tcttt-ac---tgtgttttct-aaaatctctgtt-catctctgtcctt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31548 54 +     46564 at-cct-ct-at-g-t-tcttt-ac---tgtgctttctaaaaatctctgtt-catctctgtcctt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91819 54 -     98465 at-cct-ct-at-g-t-tcttt-ac---tgtgctttctaaaaatctctgtt-catctgtgttctt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5458 51 +     35169 at-cct-ct-at-g-t-tcttt-ac---tgtgctttctaaaaatctctgtt-catctctgt---t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49419  8 -     66298 tc-ctt-cc-a------------------------------------------------------
i Pteronotus_parnellii.KE847780.1                        C 0 I 96
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1714 12 -     18639 at-cct-ct-gt-a-t-t-----------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838390  8 -  28871421 tt-ctt-at-c------------------------------------------------------
i Pteropus_alecto.KB030862.1                             C 0 I 95
s Pteropus_vampyrus.KN525825.1                             3534951  8 -   4952924 tt-ctt-ac-c------------------------------------------------------
i Pteropus_vampyrus.KN525825.1                           C 0 I 101
s Puma_concolor.QAVW01001104.1                            18096079 12 +  38429054 ct-cct-ct-at-g-t-t-----------------------------------------------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23828 52 +     91421 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150321 52 -   7812017 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4698 52 +     72585 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911033  8 +   3329780 tt-ctt-at-a------------------------------------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 105
s Rhinopithecus_bieti.k119_221883                            25658 52 +     27361 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119006 52 + 195417433 at-ttt--t-at-g-t-tcctT-AC---TGTGTTTCCT-AAAGTCTCTTTT-AATTTCTGTACTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233266 52 -   7961872 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72399  8 -    116970 tt-ctt-ct-c------------------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 95
s Saguinus_bicolor.k141_1429097                               1105 48 +     27962 at-ttt-cg-at-g-t-tcctt-cc---tgtgttttct-gaagtctc--ct-aatctctgta---
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1111 51 +      6077 at-ttt-cg-at-g-t-tcctt-cc---tgtgttttct-gaagtctc--tt-aatctctgtactt
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1132 51 +      5971 at-ttt-cg-at-g-t-tcctt-cc---tgtgttttcT-CAAGCCTC--TT-AATCTCTGTACTT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1187 51 +      5932 AT-TTT-CG-AT-G-T-TCCTT-CC---TGTGTTTTCT-CAAGTCTC--TT-AATCTCTGTACTT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1333 51 -      2099 at-ttt-CG-AT-G-T-TCCTT-CC---TGTGTTTTCT-CAAGCCTC--TT-AATCTCTGTACTT
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388450 51 - 209938924 at-ttt-cg-at-g-t-tcctt-cc---tgtgttttct-gaagtctc--tt-aatctctgtactt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1134 51 +      5979 AT-TTT-TG-AT-G-T-TCCTT-CC---TGTGTTTTCT-CAAGTCTC--TT-AATCTCTGTACTT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1510 51 -      4301 at-ttt-cg-at-g-t-tcctt-cc---tgtgttttct-gaagtctc--tt-aatctctgtactt
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235583 51 +   5703754 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtgtc--ttaa-tttctgtactt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5173 51 +     21866 at-ttt-ct-at-g-t-tcctt-ac---tgtgttttct-aaagtgtc--ttaa-tttctgtactt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113304 13 +    313613 ct-gtt-gc-ta-aat-a-----------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22145 52 +     27374 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25664 52 +     58920 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12160 52 -     45317 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19818 52 -     42441 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22498 52 -     29113 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25567 52 -     48123 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855981 12 -   1910179 at-gtg-cc-tC-A-T-C-----------------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3719 12 -     97271 at-cct-ct-at-a-t-c-----------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121749 12 +    196729 ct-cct-ct-gt-a-t-t-----------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387736 53 +   1523678 at-ttt-ct-gt-g-t-tcctt-ac---tgtgttttct-agagtctctttt-aatttctatactt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                4314 25 +      6850 -------------------------------------C-AAGATCTTTTTT-C-TTTTTGTATAT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4353 25 +     20590 -------------------------------------C-AAGATCTTTTTT-C-TTTTTGTATAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11213  8 +     22964 TT-CTT-CT-A------------------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 11 I 104
s Tamandua_tetradactyla.TamTet_scaffold_224794                 277  8 +      5583 A-CGTG-CC-T------------------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 58 I 24
s Tapirus_indicus.TapInd_scaffold_7432                      188367 12 +    199430 at-cct-ct-tt-g-t-t-----------------------------------------------
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102322 12 -    539355 at-tct-gt-tt-g-t-t-----------------------------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                           350025 53 - 186847797 at-ttt-ct-at-g-t-tCCTT-AC---TGTGTTTTCT-AAAGTCTCTTTT-AATTTCTGTACTT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17394  8 -     31044 a-agtt-cc-t------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               I 56 I 24
s Tonatia_saurophila.TonSau_scaffold_294                    477237  8 -    610378 TC-CTT-CT-G------------------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 96
s Trachypithecus_auratus.k141_1189070                        17711 52 +     26378 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30393 52 -     78344 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17032 52 +     25722 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25255 52 -     62838 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25372 52 +     46913 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6180 52 -     28527 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27194 52 -     64340 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25231 52 -     63452 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6674 52 +     22490 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          103 53 -      6147 at-ttt--taat-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7098 52 -     13050 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252335 52 -   6242583 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58066 52 +     59866 at-ttt--t-at-g-t-tcctt-ac---tgtgtttcct-aaagtctctttt-aatttctgtactt
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830309 51 -   4065304 ct-ttt-ct-at-g-t-ccttt-at---t--gttttct-atagtctctttt-catctgtgtactt
i Tupaia_chinensis.KB320699.1                            C 0 I 242
s Tupaia_tana.TupTan_flattened_line_394                       4861 51 -     70247 CT-TTT-CT-AT-G-T-CCTTC-AT---T--GTTTTCT-ATAGTCTCTTTT-CATCTGTGTACtt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 220
s Uropsilus_gracilis.UroGra_scaffold_7153                   104536 13 -    105689 AA-GTT-CC-TT-AAT-C-----------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178608 13 +   5085361 at-cct-ct-tttt-t-t-----------------------------------------------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22323 51 -     30710 ac-ctt-ct-at-g-t-tcctt-ac---tatgttttct-aaaatctctttt-catctttgtcc--
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21230 51 -    147434 ac-ctt-ct-at-g-t-tcctt-ac---tgtgttttct-aaaatctctttt-catctttgtcc--
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102232 12 -    112863 at-cct-ct-at-a-t-t-----------------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25882 12 -     86975 at-cct-ct-gt-a-t-t-----------------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1459 70 +     36723 CTTCTAGGTTCACCTTCGTTT-CTATGAAGAT--CTT-GGTTTTTC---TTCATGTTTGCT-GGTTTTTGTCAG-CACA
s Allenopithecus_nigroviridis.k141_3755588                   44746 70 +     53615 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgct-ggtttttgtccg-caca
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40569 70 +     44087 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgct-ggtttttgtcag-caca
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13273 70 -     21945 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgct-ggtttttgtcag-caca
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         14951 70 +     32033 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgct-ggtttttgtcag-caca
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69497 31 -     84148 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41726 31 -     78289 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41176 31 +     55831 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39614 31 -     64179 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21260 31 -     24835 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38243 31 +     45454 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43942 31 +     70886 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6066 31 +     30854 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30205 31 +     42133 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   48024 31 -     65372 cgtctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41769 31 +     43593 cgtctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669782 31 +   5030052 CGTCTAGGTTCACCTTCattt-ctatgaatat-----------------------------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21424 31 -     23494 cgtctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6560 31 +      8415 cgtctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16614 64 -     45910 cttccatgtttgcttttactt-ttatgagtat--ttt-gttttttc---------ttttct-agttttgggaag-caca
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272004 31 +  21539123 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8172 31 +     48076 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3308 31 -     28759 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30861 31 +     44353 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46233 31 -     71267 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20292 31 -     33135 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3431 64 +     11645 c---cctgtcctctttcactt-ctatgattat--ttc-ggtctgtc---tcc---ttttct-agtttttggtag-cacg
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3432 64 -     19611 c---cctgtcctctttcactt-ctatgattat--ttc-ggtctgtc---tcc---ttttct-agtttttggtag-cacg
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5201 31 +     28062 cttccaggttcaccttcgttt-ctgtgaatgt-----------------------------------------------
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40495 31 -     91139 cttccaggttcaccttcgttt-ctgtgaatgt-----------------------------------------------
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18021 31 +     95584 cttccaggttcaccttcgttt-ctgtgaatgt-----------------------------------------------
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17934 31 +    119600 cttccaggttcaccttcgttt-ctgtgaatgt-----------------------------------------------
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7427 22 +     18648 cttctaggttc---------t-ctatgaatat-----------------------------------------------
i Callibella_humilis.k141_1233062                        C 0 I 4
s Callimico_goeldii.k141_1609886                              7100 22 -     13885 cttctaggttc---------t-ctgtgaatgt-----------------------------------------------
i Callimico_goeldii.k141_1609886                         C 0 I 4
s Callithrix_geoffroyi.k119_473390                           15788 22 +     17162 cttctaggttc---------t-ctatgaatat-----------------------------------------------
i Callithrix_geoffroyi.k119_473390                       C 0 I 4
s Callithrix_jacchus.pat_scaffold_3                      165450743 22 + 189096842 CTTCTAGGTTC---------T-CTATGAATAT-----------------------------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 4
s Callithrix_kuhlii.k119_404482                              17036 22 -     18408 cttctaggttc---------t-ctatgaatat-----------------------------------------------
i Callithrix_kuhlii.k119_404482                          C 0 I 4
s Carlito_syrichta.NW_007259797.1                           267647 52 +    496798 tttgaatggtcttttttattttctatagccat--t----gtttttc---ctt---ttt--------------ag-acaC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cebuella_niveiventris.k141_592277                           2322 22 -     12580 cttctaggttc---------t-ctatgaatat-----------------------------------------------
i Cebuella_niveiventris.k141_592277                      C 0 I 4
s Cebuella_pygmaea.k141_145798                               40208 22 +     53515 cttctaggttc---------t-ctatgaatat-----------------------------------------------
i Cebuella_pygmaea.k141_145798                           C 0 I 4
s Cebus_albifrons.Contig27                                  368411 31 -  26074798 cttctaggttgaccttccttt-ctatggatat-----------------------------------------------
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5300 31 -     34880 cttctaggttgaccttccttt-ctatggatat-----------------------------------------------
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64395 31 -     89041 cttctaggttgaccttccttt-ctatggatat-----------------------------------------------
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            816 52 -      1636 TTTGAATGGTCTTTTTTATTTTCTATAGCCAT--T----GTTTCTC---CTT---TTT--------------AG-ACAC
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Cercocebus_atys.KQ010504.1                                137908 70 -   4669795 CTTCTAGGTTCACCTTCATTT-CTGtgaatat--ttt-ggtttttc---ttcatgtttgct-GGGTTTTGTCag-caca
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41648 70 +     47900 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41481 70 -     44860 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41464 70 -    148725 cttctaggttcaccttcattt-ctgtgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24527 70 -     40656 cttctaagttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgtt-ggtttttgtcag-caca
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4463 70 +     20796 cttctaagttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgtt-ggtttttgtcag-caca
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8719 70 -     17524 cttctaagttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgtt-ggtttttgtcag-caca
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24407 70 -     34525 cttctaagttcaccttcattt-ctatgaatat--ttt-ggtttttc---tccatatttgtt-ggtttttgtcag-caca
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9117 70 -     25376 cttctaagttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgtt-ggtttttgtcag-caca
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361683 70 -  39242232 cttctaagttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgtt-ggtttttgtcag-caca
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267427 70 +  21565898 cttctaagttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgtt-ggtttttgtcag-caca
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28883 70 -     45857 cttctaagttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgct-ggtttttgtcag-caca
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24672 70 -     32606 cttctaagttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgtt-ggtttttgtcag-caca
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          858 70 +      8499 cttctaagttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgtt-ggtttttgtcag-caca
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22376 70 +     70610 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgct-ggtttttgtcag-caca
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19236 70 +     36323 cttctaagttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgtt-ggtttttgtcag-caca
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             27859 67 -     33796 ctttcaagttctctttcgctt-ctgtgattgt--ttt-ggtctgtc---tcc---ttttct-agtttttggtag-caca
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2046 67 -     15404 ctttcaagttctctttcactt-ctatgattgt--ttt-ggtctgtc---tcc---ttttct-agtttttggtag-caca
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6298 31 -     32913 cttctaggttcaccttcattt-ctatgaatgt-----------------------------------------------
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16711 31 -     40346 cttctaggttcaccttcattt-ctatgaatgt-----------------------------------------------
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             16975 31 +    216457 cttctaggttcaccttcattt-ctatgaatgt-----------------------------------------------
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16759 31 +     39636 cttctaggttcaccttcattt-ctatgaatgt-----------------------------------------------
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1158 20 +      5346 ct---AGGTTCTCCACGGTat-ct-------------------------------------------------------
i Chiropotes_albinasus.k141_1946120                      C 0 I 1
s Chiropotes_israelita.k141_313004                           39841 31 -    112038 cttctaggttcaccttcattt-ctgtgaatgt-----------------------------------------------
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5413 31 +     34062 cttctaggttcaccttcattt-ctgtgaatgt-----------------------------------------------
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340132 70 +  18827391 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgct-ggtttttgtcag-caca
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6743 70 -     44032 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgct-ggtttttgtcag-caca
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301458 70 - 135778131 CTTCTAGGTTCACCTTCATTT-CTATgaatat--ttt-ggtttttc---ttcatATTTGCT-GGTTTTTgtcag-caca
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406015 70 -   2368649 CTTCCAGGTTCACCTTCATTT-CTATgaatat--ttt-ggtttttc---ttcatGTTTGCT-GGTTTTTGTCAG-CACA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375178 70 - 200372422 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5902 70 -      6605 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289867 67 +  12879189 attccatgttctctttcactt-ctatgattat--ttt-ggtttttc---ttc---ttttct-agattttggcaa-caca
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                               259687 70 +  21539334 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatatttgct-ggtttttgtcag-caca
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galago_moholi.ctg3793                                     120677 64 -    137831 cttccatgttcgcttttactt-ctatgagtat--ttt-gttttttc---------ttttct-agttttgggaag-caca
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4218 64 +     22493 cttccatgttcgcttttactt-ctatgagtat--ttt-gttttttc---------ttttct-agttttgggaag-caca
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               4134 67 +      5976 CTTCCATGTTTACTTTTATTT-CTATGTTTAT--TTT-GGCTTTTC---TTC---TTTTCT-GGTTTTTGCCAG-CACA
i Galeopterus_variegatus.GalVar_scaffold_132127          I 68 I 201
s Gorilla_beringei.k141_3358147                               1822 70 -      8343 cttctaggttcaccttcattt-ctatgaagat--ttt-gctttttc---ttcatgtttgct-ggtttttgtcag-caca
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251312 70 - 186649187 cttctaggttcaccttcattt-ctatgaagat--ctt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Gorilla_gorilla.LT578341.1                             C 0 I 1
s Hoolock_leuconedys.ctg274                                    139206 69 -    630532 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-g-tttttgtcag-caca
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               2240 70 +     12352 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgctgg-tttttgtcag-caca
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9423 70 +     55766 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgctgg-tttttgtcag-caca
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048761 70 + 191637585 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgctgg-tttttgtcag-caca
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798093 70 +  11177569 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgctgg-tttttgtcag-caca
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                     924 67 -      1527 cttccatgtcctctttcactt-ctatgattgt--ttt-ggtctgtc---tcc---ttttct-agtttttggtag-caca
i Indri_indri.k141_4600452                               I 53 C 0
s Lagothrix_lagothricha.k141_246028                          40549 31 +    110728 cttctaggttcaccttcattt-ctatgaatat-----------------------------------------------
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1239 22 -     13097 CTTCTAGGTTC---------T-CTACGGATAT-----------------------------------------------
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1190 22 +      5940 CTTCTAGGTTC---------T-CTACGGATAT-----------------------------------------------
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         821 22 -      5717 cttctaggttc---------t-ctacggatat-----------------------------------------------
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7461 22 -     11567 cttctaggttc---------t-ctatgaatat-----------------------------------------------
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8842 22 -     12945 cttctaggttc---------t-ctatgaatat-----------------------------------------------
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6218 67 +     29618 cttccatgttctctttcattt-ctatgattgt--ttt-ggtctgtc---tcc---ttttct-agtttttggtag-caca
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6215 67 +     31569 cttccatgttctctttcattt-ctatgattgt--ttt-ggtctgtc---tcc---ttttct-agtttttggtag-caca
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6226 67 +     24756 cttccatgttctctttcattt-ctgtgattgt--ttt-ggtctgtc---tcc---ttttct-agtttttgggag-caca
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6219 67 +     16388 cttccatgttctctttcattt-ctatgattgt--ttt-ggtctgtc---tcc---ttttct-agtttttggtag-caca
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               329864 67 -   1826925 ct---aggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            6663 64 +     19643 cttctttgttcgctttcactt-ctatgagtat--ttt-gttttttc---------ttttct-agttttgggaag-caca
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5040322 64 -   6120653 cttctttgttcgctttcactt-ctatgagtat--ttt-gttttttc---------ttttct-agttttgggaag-caca
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_1757516                              42146 70 -     61512 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369774 70 -  60120075 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22094 70 +     30207 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19197 70 -     24934 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 21980 70 +     30527 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33170 70 -     50087 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42908 70 +     51645 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411482 70 - 187317192 CTTCTAGGTTCACCTTCATTT-CTATgaatat--ttt-ggtttttc---ttcatgtttgct-GGGTTTTGtcag-caca
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396365 70 +  25927173 CTTCTAGGTTCACCTTCATTT-CTAtgaatat--ttt-ggtttttc---ttcatgtttgct-GGGTTTTGTCAg-caca
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45496 70 -     62418 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-cacg
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22184 70 +     24253 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 41939 70 +     59329 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267773 70 +    668171 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19119 70 +     21031 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32852 70 +     33478 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319249 70 +  24302211 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354081 70 -    752769 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_582562                                 7199 22 +     17804 cttctaggttc---------t-ctatgaatat-----------------------------------------------
i Mico_argentatus.k141_582562                            C 0 I 4
s Mico_humeralifer.k141_1180625                               7983 22 -     12984 cttctaggttc---------t-ctatgaatat-----------------------------------------------
i Mico_humeralifer.k141_1180625                          C 0 I 4
s Mico_schneideri.k141_1877700                                     15934 22 -     26561 cttctaggttc---------t-ctatgaatat-----------------------------------------------
i Mico_schneideri.k141_1877700                                 C 0 I 4
s Microcebus_murinus.CM007674.1                           74981827 67 +  93316391 CTTTCATGTTCTCTTTCACTT-CTATGATTGT--TTT-GGGCGATC---TCC---TTTTCT-AGTTTTTGACAG-CACA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19241 70 -     27822 cttctaagttcaccttcagtt-ctatgaatat--ttt-ggtttttc---ttcatatttgtt-ggtttttgtcag-caca
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     49685 67 -     62432 ctttcatgttctctttcactt-ctatgattgt--ttt-gggcgatc---tcc---ttttct-agtttttgacag-caca
i Mirza_zaza.k141_766280                                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              25855 70 +     34575 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           50502 70 -    132029 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6598 70 -     16345 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12483 70 +     22201 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410818 70 -  22158432 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22881 70 -     54323 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93631947 64 + 196305487 cttccatgttcgctttcactt-ttatgagtat--ttt-gttttttc---------ttttct-aattttgggaag-caca
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1336 64 +      2758 cttccatgttcgctttcactt-ttatgagtat--ttt-gttttttc---------ttttct-aattttgggaag-caca
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560201 64 - 199412804 cttccatgttcgctttcactt-ttatgagtat--ttt-gttttttc---------ttttct-aattttgggaag-caca
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        35808 64 -     51505 cttccatgttcccttttactt-ctatgagtat--ttt-gttttttc---------ttttct-agttttgggaag-caca
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             348823 65 +   1103335 CTTCCATGTTCGCTTTTACTT-CTatgagtat--ttt-gttttttc---------ttttct-agttttggGAAATCACA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468701 70 - 189151597 CTTCTAGGTTCACCTTCATTT-CTATGAAGAT--TTT-ggtttttc---ttcatgtttgct-gGTTTTTGTCAG-CACA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   240092 67 - 183742232 CT---AGGTTCACCTTCATTT-CTATgaatat--ttt-ggtttttc---ttcatgtttgct-GGGTTTTGTCag-caca
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6556 67 +     21308 ct---aggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287595 67 -  20919399 ct---aggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19211 67 -     27687 ct---aggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12347 67 +     16796 ct---aggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19157 67 -     23640 ct---aggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-gggttttgtcag-caca
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22057 64 +     31479 cttccatgtttgcttttactt-ctataagtat--ttt-gttttttc---------ttttct-agttttgggaag-caca
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14427 64 -     24908 cttccatgtttgcttttactt-ctataagtat--ttt-gttttttc---------ttttct-agttttgggaag-cata
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            6006 70 +      7560 cttccaggttcaccttcattt-ctatgaagat--ttt-ggtttttc---ttcatgtttgct-ggtttctgtcag-caca
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61713 70 -     63152 cttccaggttcaccttcattt-ctatgaagat--ttt-ggtttttc---ttcatgtttgct-ggtttctgtcag-caca
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44312 70 +     45295 cttccaggttcaccttcattt-ctatgaagat--ttt-ggtttttc---ttcatgtttgct-ggtttctgtcag-caca
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    1991 70 +      5735 CTTCCAGGTTCACCTTCATTT-CTATGaagat--ttt-ggtttttc---ttcatgTTTGCT-GGTTTCTGtcag-caca
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 I 6
s Pithecia_albicans.k141_1239476                             62190 31 +    207309 cttctaggttcaccttcattt-ctatgaatgt-----------------------------------------------
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3310 31 -     25401 cttctaggttcaccttcattt-ctatgaatgt-----------------------------------------------
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29025 31 +     58159 cttctaggttcaccttcattt-ctatgaatgt-----------------------------------------------
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29301 31 +     63561 cttctaggttcaccttcattt-ctatgaatgt-----------------------------------------------
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29064 31 +     51148 cttctaggttcaccttcattt-ctatgaatgt-----------------------------------------------
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554057 31 -   4542175 cttctaggttcaccttcattt-ctatgaatgt-----------------------------------------------
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29048 31 +     51125 cttctaggttcaccttcattt-ctatgaatgt-----------------------------------------------
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5472 31 +     39866 cttctaggttcaccttcattt-ctgtgaatat-----------------------------------------------
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           559 31 -      9282 cttctaggttcaccttcattt-ctgtgaatat-----------------------------------------------
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39960 31 -     87950 cttctaggttcaccttcattt-ctgtgaatat-----------------------------------------------
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40353 31 -     88961 cttctaggttcaccttcattt-ctgtgaatat-----------------------------------------------
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5052 31 -     39403 cttctaggttcaccttcattt-ctgtgaatat-----------------------------------------------
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40006 31 +     87928 cttctaggttcaccttcattt-ctgtgaatat-----------------------------------------------
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5050 31 -     60166 cttctaggttcaccttcattt-ctgtgaatat-----------------------------------------------
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      11986 31 -     67232 cttctaggttcaccttcattt-ctgtgaatat-----------------------------------------------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39902 31 -     90634 cttctaggttcaccttcattt-ctgtgaatat-----------------------------------------------
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41370 31 +     89403 cttctaggttcaccttcattt-ctgtgaatat-----------------------------------------------
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174324 70 - 189387572 CATCTAGGTTCACCTTCATTT-CTATGAAGAT--TTT-Ggtttttc---ttcatgtttgct-gttttttgtcag-caca
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189322 70 -   9816681 catctaggttcaccttcattt-ctatgaagat--ttt-ggtttttc---ttcatgtttgct-gttttttgtcag-caca
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24489 70 +     69807 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41684 70 -     80239 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563308 67 -   2598838 CTTCCCTGTCCTCTTTCACTT-CTATGATTAT--TTC-GGTCTGTC---tcc---ttttct-agtttttggtAG-CACA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                            945 67 -      7103 cttccctgtcctctttcactt-ctatgattat--ttc-ggtctgtc---tcc---ttttct-agtttttggtag-caca
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1541 67 -     11706 cttccctgtcttctttcactt-ctatgattat--ttc-ggcctgtc---tcc---ttttct-agtttttggtag-caca
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5276 67 -     30655 cttccctgtcctctttcactt-ctatgattat--ttc-ggcctgtc---tcc---ttttct-agtttttggtag-caca
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31602 67 +     46564 cttccctgtcctctttcactt-ctatgattat--ttc-ggtcagtc---tcc---ttttct-agtttttggtag-caca
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91873 67 -     98465 cttccctgtcctctttcactt-ctatgattat--ttc-ggtctgtc---tcc---ttttct-agtttttggtag-caca
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5509 67 +     35169 cttccctgtcctctttcacgt-ctatggttat--ttc-ggcctgtc---tcc---ttttct-agtttttggtag-caca
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23880 70 +     91421 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgcc-ggtttttgtcag-caca
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150373 70 -   7812017 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-taca
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4750 70 +     72585 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_221883                            25710 70 +     27361 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119058 70 + 195417433 CTTCCAGGTTCACCTTCATTT-CTATgaatat--ttt-ggtttttc---ttcatgTTTGCT-GGTTTTTGTCAG-CACA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233318 70 -   7961872 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               1153 21 +     27962 cttctAGGTTC---------T-CCACGG-Tat-----------------------------------------------
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1162 22 +      6077 cttctaggttc---------T-CTACGGACAT-----------------------------------------------
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1183 19 +      5971 CT---AGGTTC---------T-GTACGGACAT-----------------------------------------------
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1238 19 +      5932 CT---AGGTTC---------T-GTACGGATAT-----------------------------------------------
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1384 19 -      2099 CT---AGGTTC---------T-CTACGGATat-----------------------------------------------
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388501 21 - 209938924 cttctaggttc---------t-ctacgg-tat-----------------------------------------------
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1185 19 +      5979 CT---AGGTTC---------T-GTACGGATat-----------------------------------------------
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1561 22 -      4301 cttctaggttc---------T-CTACGGACAT-----------------------------------------------
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235634 31 +   5703754 cttctaggttccccttcattt-ctatggatat-----------------------------------------------
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5224 31 +     21866 cttctaggttccccttcattt-ctatggatat-----------------------------------------------
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         22197 70 +     27374 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25716 70 +     58920 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12212 70 -     45317 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19870 70 -     42441 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22550 70 -     29113 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25619 70 -     48123 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387789 70 +   1523678 cttctaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                4339 52 +      6850 TTCAAATGGTCTTTTTTATTTTCTATAGCCAT--T----GTTTTTC---CTT---TGT--------------AG-ACAC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4378 52 +     20590 TTCAAATGGTCTTTTTTATTTTCTATAGCCAT--T----GTTTTTC---CTT---TGT--------------AG-ACAC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350078 67 - 186847797 CT---AGGTTCACCTTCATTT-CTATgaatat--ttt-ggtttttc---ttcatgtttgct-GGGTTTTGTCag-caca
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        17763 68 +     26378 cttccaggttcaccttcattt-ctatgaaa----ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30445 70 -     78344 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17084 68 +     25722 cttccaggttcaccttcattt-ctatgaaa----ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25307 70 -     62838 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25424 70 +     46913 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6232 70 -     28527 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27246 70 -     64340 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25283 70 -     63452 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6726 70 +     22490 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          156 70 -      6147 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7150 68 -     13050 cttccaggttcaccttcattt-ctatgaaa----ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252387 70 -   6242583 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58118 70 +     59866 cttccaggttcaccttcattt-ctatgaatat--ttt-ggtttttc---ttcatgtttgct-ggtttttgtcag-caca
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830602 71 -   4065304 ctttcatttttacttgcattt-gtggggttttttttt--tcttttctaattc---ttttct-agtttttatcag-taca
i Tupaia_chinensis.KB320699.1                            I 242 I 3
s Tupaia_tana.TupTan_flattened_line_394                       5132 69 -     70247 ctttcatatttacttgcattt-gtatgatttt--ttt--gcttttctaattc---ttttct-agtttttatcag-caca
i Tupaia_tana.TupTan_flattened_line_394                  I 220 I 3
s Varecia_rubra.k141_787544                                  22374 65 -     30710 -ttccatgttctctttcactt-ctgtgattat--ttt-ggtctgcc---tcc---ttttct-ag-tttggacag-caca
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21281 65 -    147434 -ttccatgttctctttcactt-ctgtgattat--ttt-ggtctgcc---tcc---ttttct-ag-tttggacag-caca
i Varecia_variegata.k141_289850                          C 0 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    41190  0 +    145209 C
e Echinops_telfairi.JH980293.1                            62850875  0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_171931              10580  0 -     14239 C
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862241 96 -  20541912 I
e Galagoides_demidoff.k141_561628                            17659 17509 +     32986 T
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17402 24 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107724 24 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10395 25 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2569 95 +      5315 I
e Zalophus_californianus.ZalCal_flattened_line_17732         25894  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102244  0 -    112863 C
e Ursus_maritimus.KK499267.1                                178621  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              3731  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          1726  0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        36520  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1448673  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195481  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11465886  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14351939  0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5500  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23004  0 -     74585 C
e Lycaon_pictus.CM007581.1                                41611863  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810491  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913135  0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104278  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41612708  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          219583  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6222  0 -     23171 C
e CanFam4.chr16                                           42502592  0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2497 96 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412096  0 +  29979442 C
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104549  0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    477245 96 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    102334  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      188379  0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 285 24 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11221 104 +     22964 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             121761  0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1855993  0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113317  0 +    313613 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72407 95 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2911041 105 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096091  0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3534959 101 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838398 95 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49427 96 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12123  0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969265  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18458540  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21214  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125012 93 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117167 24 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   15355  0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176361 96 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182184 96 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       147948 106 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Manis_pentadactyla.KN006162.1                             218000  0 +    317179 C
e Manis_javanica.JSZB01003497.1                             670709  0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220768 95 -    270270 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66057  0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47009 105 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547693 105 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                27601  0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 24624  0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113276  0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Equus_przewalskii.KK951119.1                              409331  0 -    498745 C
e Equus_caballus.CM000403.2                               21372545  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3038611  0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3804 93 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  136422  0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  661629  0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1063  0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           248 100 -      8242 I
e Condylura_cristata.JH655891.1                           35804580  0 +  53390261 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16178  0 +     27315 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174210 98 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           809829  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       1529 4 +     36723 T-----TTT
s Allenopithecus_nigroviridis.k141_3755588                   44816 5 +     53615 t--tt-tt-
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40639 3 +     44087 t-----tt-
i Allochrocebus_lhoesti.k141_441277                      C 0 I 1
s Allochrocebus_preussi.k141_1993939                         13343 5 -     21945 t--tt-tt-
i Allochrocebus_preussi.k141_1993939                     C 0 I 1
s Allochrocebus_solatus.k141_3554717                         15021 4 +     32033 t--t--tt-
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69528 5 -     84148 t--tt-tt-
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41757 5 -     78289 t--tt-tt-
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41207 5 +     55831 t--tt-tt-
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39645 5 -     64179 t--tt-tt-
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21291 5 -     24835 t--tt-tt-
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38274 5 +     45454 t--tt-tt-
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43973 5 +     70886 t--tt-tt-
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6097 5 +     30854 t--tt-tt-
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30236 5 +     42133 t--tt-tt-
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   48055 5 -     65372 t--tt-tt-
i Aotus_azarae.k141_118258                               C 0 I 3
s Aotus_griseimembra.k141_982342                             41800 5 +     43593 t--tt-tt-
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669813 5 +   5030052 t--tt-tt-
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21455 5 -     23494 t--tt-tt-
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6591 5 +      8415 t--tt-tt-
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16678 8 -     45910 tactttat-
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272035 5 +  21539123 t--tt-tt-
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8203 5 +     48076 t--tt-tt-
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3339 5 -     28759 t--tt-tt-
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30892 5 +     44353 t--tt-tt-
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46264 5 -     71267 t--tt-tt-
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20323 5 -     33135 t--tt-tt-
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3495 8 +     11645 cactttat-
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3496 8 -     19611 cactttat-
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5232 4 +     28062 t--tt-t--
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40526 4 -     91139 t--tt-t--
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18052 4 +     95584 t--tt-t--
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17965 4 +    119600 t--tt-t--
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7453 1 +     18648 t--------
i Callibella_humilis.k141_1233062                        I 4 I 2
s Callimico_goeldii.k141_1609886                              7126 1 -     13885 t--------
i Callimico_goeldii.k141_1609886                         I 4 I 2
s Callithrix_geoffroyi.k119_473390                           15814 1 +     17162 t--------
i Callithrix_geoffroyi.k119_473390                       I 4 I 2
s Callithrix_jacchus.pat_scaffold_3                      165450769 1 + 189096842 T--------
i Callithrix_jacchus.pat_scaffold_3                      I 4 I 2
s Callithrix_kuhlii.k119_404482                              17062 1 -     18408 t--------
i Callithrix_kuhlii.k119_404482                          I 4 I 2
s Carlito_syrichta.NW_007259797.1                           267699 5 +    496798 T---TCct-
i Carlito_syrichta.NW_007259797.1                        C 0 I 14
s Cebuella_niveiventris.k141_592277                           2348 1 -     12580 t--------
i Cebuella_niveiventris.k141_592277                      I 4 I 2
s Cebuella_pygmaea.k141_145798                               40234 1 +     53515 t--------
i Cebuella_pygmaea.k141_145798                           I 4 I 2
s Cebus_albifrons.Contig27                                  368442 5 -  26074798 t--tt-tt-
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5331 5 -     34880 t--tt-tt-
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64426 5 -     89041 t--tt-tt-
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            868 5 -      1636 T---TCCT-
i Cephalopachus_bancanus.k141_72622                      C 0 I 14
s Cercocebus_atys.KQ010504.1                                137978 5 -   4669795 t--tt-tt-
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41718 5 +     47900 t--tt-tt-
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41551 5 -     44860 t--tt-tt-
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41534 5 -    148725 t--tt-tt-
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24597 5 -     40656 t--tt-tt-
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4533 5 +     20796 t--tt-tt-
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8789 5 -     17524 t--tt-tt-
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24477 5 -     34525 t--tt-tt-
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9187 5 -     25376 t--tt-tt-
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361753 5 -  39242232 t--tt-tt-
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267497 5 +  21565898 t--tt-tt-
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28953 5 -     45857 t--tt-tt-
i Cercopithecus_neglectus.k141_858615                    C 0 I 2
s Cercopithecus_nictitans.k141_2995370                       24742 5 -     32606 t--tt-tt-
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          928 5 +      8499 t--tt-tt-
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22446 5 +     70610 t--tt-tt-
i Cercopithecus_pogonias.k141_6079                       C 0 I 1
s Cercopithecus_roloway.k141_3012935                         19306 5 +     36323 t--tt-tt-
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             27926 8 -     33796 cactttat-
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2113 8 -     15404 cactttat-
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6329 5 -     32913 t--tt-tt-
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16742 5 -     40346 t--tt-tt-
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17006 5 +    216457 t--tt-tt-
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16790 5 +     39636 t--tt-tt-
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1179 2 +      5346 ------tt-
i Chiropotes_albinasus.k141_1946120                      I 1 C 0
s Chiropotes_israelita.k141_313004                           39872 4 -    112038 t--tt-t--
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5444 4 +     34062 t--tt-t--
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340202 5 +  18827391 t--tt-tt-
i Chlorocebus_aethiops.ctg25                             C 0 I 1
s Chlorocebus_pygerythrus.k141_3063162                        6813 5 -     44032 t--tt-tt-
i Chlorocebus_pygerythrus.k141_3063162                   C 0 I 1
s Chlorocebus_sabaeus.CM001947.1                            301528 4 - 135778131 t--t--tt-
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 1
s Colobus_angolensis.KN981557.1                             406085 5 -   2368649 T---TTTT-
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375248 5 - 200372422 t--tt-tt-
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5972 5 -      6605 t--tt-tt-
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289934 8 +  12879189 cactttat-
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                               259757 5 +  21539334 t--tt-tt-
i Erythrocebus_patas.Contig38                            C 0 I 1
s Galago_moholi.ctg3793                                     120741 8 -    137831 tactttat-
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4282 8 +     22493 tactttat-
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16347 5 +     18121 t--tt-at-
i Galeopterus_variegatus.GalVar_scaffold_74466           I 67 C 0
s Gorilla_beringei.k141_3358147                               1892 3 -      8343 g------tt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251383 3 - 186649187 t------tt
i Gorilla_gorilla.LT578341.1                             I 1 C 0
s Hoolock_leuconedys.ctg274                                    139275 6 -    630532 t--tt-ttt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               2310 6 +     12352 t--tt-ttt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9493 6 +     55766 t--tt-ttt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048831 6 + 191637585 t--tt-ttt
i Hylobates_pileatus_b.LG02                                     C 0 I 2
s Hylobates_pileatus_a.tarseq_633                            7798163 6 +  11177569 t--tt-ttt
i Hylobates_pileatus_a.tarseq_633                          C 0 I 2
s Indri_indri.k141_4600452                                     991 8 -      1527 cactttat-
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40580 5 +    110728 t--tt-tt-
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1261 5 -     13097 C---TTTT-
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1212 5 +      5940 C---TTTT-
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         843 5 -      5717 c--tt-tt-
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7483 1 -     11567 c--------
i Leontopithecus_chrysomelas.k141_1327670                C 0 I 1
s Leontopithecus_rosalia.k141_349454                          8864 1 -     12945 c--------
i Leontopithecus_rosalia.k141_349454                     C 0 I 1
s Lepilemur_ankaranensis.k141_567626                          6285 8 +     29618 cactttat-
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6282 8 +     31569 cactttat-
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6293 8 +     24756 cactttat-
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6286 8 +     16388 cactttat-
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               329931 5 -   1826925 t--tt-tt-
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            6727 8 +     19643 tactttat-
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5040386 8 -   6120653 tactttat-
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_1757516                              42216 5 -     61512 t--tt-tt-
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369844 5 -  60120075 t--tt-tt-
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22164 5 +     30207 t--tt-tt-
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19267 5 -     24934 t--tt-tt-
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22050 5 +     30527 t--tt-tt-
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33240 5 -     50087 t--tt-tt-
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42978 5 +     51645 t--tt-tt-
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411552 5 - 187317192 t--tt-tt-
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396435 5 +  25927173 t--tt-tt-
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45566 5 -     62418 t--tt-tt-
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22254 5 +     24253 t--tt-tt-
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42009 5 +     59329 t--tt-tt-
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267843 5 +    668171 t--tt-tt-
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19189 5 +     21031 t--tt-tt-
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32922 5 +     33478 t--tt-tt-
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319319 5 +  24302211 t--tt-tt-
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354151 5 -    752769 t--tt-tt-
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_582562                                 7225 1 +     17804 t--------
i Mico_argentatus.k141_582562                            I 4 I 2
s Mico_humeralifer.k141_1180625                               8009 1 -     12984 t--------
i Mico_humeralifer.k141_1180625                          I 4 I 2
s Mico_schneideri.k141_1877700                                     15960 1 -     26561 t--------
i Mico_schneideri.k141_1877700                                 I 4 I 2
s Microcebus_murinus.CM007674.1                           74981894 8 +  93316391 CACTTTAT-
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19311 5 -     27822 t--tt-tt-
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     49752 8 -     62432 cactttat-
i Mirza_zaza.k141_766280                                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              25925 5 +     34575 t--tt-tt-
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           50572 6 -    132029 t--tt-ttt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6668 5 -     16345 t--t--ttt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12553 5 +     22201 t--t--ttt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410888 5 -  22158432 t--t--ttt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22951 5 -     54323 t--t--ttt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93632011 8 + 196305487 tactttat-
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1400 8 +      2758 tactttat-
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560265 8 - 199412804 tactttat-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        35872 8 -     51505 tactttat-
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             348888 8 +   1103335 TACTTTAT-
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468771 3 - 189151597 T------TT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   240159 5 - 183742232 t--tt-tt-
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6623 5 +     21308 t--tt-tt-
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287662 5 -  20919399 t--tt-tt-
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19278 5 -     27687 t--tt-tt-
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12414 5 +     16796 t--tt-tt-
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19224 5 -     23640 t--tt-tt-
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22121 8 +     31479 tactttat-
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14491 8 -     24908 tactttat-
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            6076 5 +      7560 t--tt-tt-
i Piliocolobus_badius.k141_2495623                       C 0 I 1
s Piliocolobus_gordonorum.k141_905727                        61783 5 -     63152 t--tt-tt-
i Piliocolobus_gordonorum.k141_905727                    C 0 I 2
s Piliocolobus_kirkii.k141_579682                            44382 5 +     45295 t--tt-tt-
i Piliocolobus_kirkii.k141_579682                        C 0 I 2
s Piliocolobus_tephrosceles.PDMG02035043.1                    2061 5 +      5737 t--tt-tt-
i Piliocolobus_tephrosceles.PDMG02035043.1               I 721 n 6
s Pithecia_albicans.k141_1239476                             62221 5 +    207309 t--tt-tt-
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3341 5 -     25401 t--tt-tt-
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29056 5 +     58159 t--tt-tt-
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29332 5 +     63561 t--tt-tt-
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29095 5 +     51148 t--tt-tt-
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554088 5 -   4542175 t--tt-tt-
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29079 5 +     51125 t--tt-tt-
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5503 5 +     39866 t--tt-tt-
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           590 5 -      9282 t--tt-tt-
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39991 5 -     87950 t--tt-tt-
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40384 5 -     88961 t--tt-tt-
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5083 5 -     39403 t--tt-tt-
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40037 5 +     87928 t--tt-tt-
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5081 5 -     60166 t--tt-tt-
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12017 5 -     67232 t--tt-tt-
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39933 5 -     90634 t--tt-tt-
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41401 5 +     89403 t--tt-tt-
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174394 6 - 189387572 t--tt-ttt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189392 6 -   9816681 t--tt-ttt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24559 5 +     69807 t--tt-tt-
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41754 5 -     80239 t--tt-tt-
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563375 8 -   2598838 CGCTTTAT-
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1012 8 -      7103 cgctttat-
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1608 8 -     11706 cactttat-
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5343 8 -     30655 cactttat-
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31669 8 +     46564 cgctttat-
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91940 8 -     98465 cgctttat-
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5576 8 +     35169 cactttat-
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23950 5 +     91421 t--tt-tt-
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150443 5 -   7812017 t--tt-tt-
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4820 5 +     72585 t--tt-tt-
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_221883                            25780 5 +     27361 t--tt-tt-
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119128 5 + 195417433 T---TTTT-
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233388 5 -   7961872 t--tt-tt-
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               1174 5 +     27962 c--tt-tt-
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1184 5 +      6077 C---TTTT-
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1202 5 +      5971 C---TTTT-
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1257 5 +      5932 C---TTTT-
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1403 5 -      2099 c--tt-tt-
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388522 5 - 209938924 c--tt-tt-
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1204 5 +      5979 c--tt-tt-
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1583 5 -      4301 C---TTTT-
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235665 5 +   5703754 t--tt-tt-
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5255 5 +     21866 t--tt-tt-
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         22267 5 +     27374 t--tt-tt-
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25786 5 +     58920 t--tt-tt-
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12282 5 -     45317 t--tt-tt-
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19940 5 -     42441 t--tt-tt-
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22620 5 -     29113 t--tt-tt-
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25689 5 -     48123 t--tt-tt-
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387859 6 +   1523678 t--tt-ttt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                4391 5 +      6850 C---TCCT-
i Tarsius_lariang.k141_1780720                           C 0 I 14
s Tarsius_wallacei.k141_226975                                4430 5 +     20590 T---TCCT-
i Tarsius_wallacei.k141_226975                           C 0 I 14
s Theropithecus_gelada.CM009954.1                           350145 5 - 186847797 t--tt-tt-
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        17831 5 +     26378 t--tt-tt-
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30515 5 -     78344 t--tt-tt-
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17152 5 +     25722 t--tt-tt-
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25377 5 -     62838 t--tt-tt-
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25494 5 +     46913 t--tt-tt-
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6302 5 -     28527 t--tt-tt-
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27316 5 -     64340 t--tt-tt-
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25353 5 -     63452 t--tt-tt-
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6796 5 +     22490 t--tt-tt-
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          226 5 -      6147 t--tt-tt-
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7218 5 -     13050 t--tt-tt-
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252457 5 -   6242583 t--tt-tt-
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58188 5 +     59866 t--tt-tt-
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830676 5 -   4065304 a--tt-at-
i Tupaia_chinensis.KB320699.1                            I 3 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5204 5 -     70247 a--tt-at-
i Tupaia_tana.TupTan_flattened_line_394                  I 3 C 0
s Varecia_rubra.k141_787544                                  22439 8 -     30710 cactttat-
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21346 8 -    147434 cactttat-
i Varecia_variegata.k141_289850                          C 0 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    41190 0 +    145209 C
e Echinops_telfairi.JH980293.1                            62850875 0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_171931              10580 0 -     14239 C
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862241 96 -  20541912 I
e Galagoides_demidoff.k141_561628                            17659 17509 +     32986 T
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17402 24 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107724 24 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10395 25 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2569 95 +      5315 I
e Zalophus_californianus.ZalCal_flattened_line_17732         25894 0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102244 0 -    112863 C
e Ursus_maritimus.KK499267.1                                178621 0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              3731 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          1726 0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        36520 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1448673 0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195481 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11465886 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14351939 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5500 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23004 0 -     74585 C
e Lycaon_pictus.CM007581.1                                41611863 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810491 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913135 0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104278 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41612708 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          219583 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6222 0 -     23171 C
e CanFam4.chr16                                           42502592 0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2497 96 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412096 0 +  29979442 C
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104549 0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    477245 96 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    102334 0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      188379 0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 285 24 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11221 104 +     22964 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             121761 0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1855993 0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113317 0 +    313613 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72407 95 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2911041 105 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096091 0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3534959 101 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838398 95 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49427 96 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12123 0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969265 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18458540 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21214 0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125012 93 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117167 24 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   15355 0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176361 96 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182184 96 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       147948 106 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Manis_pentadactyla.KN006162.1                             218000 0 +    317179 C
e Manis_javanica.JSZB01003497.1                             670709 0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220768 95 -    270270 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66057 0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47009 105 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547693 105 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                27601 0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 24624 0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113276 0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Equus_przewalskii.KK951119.1                              409331 0 -    498745 C
e Equus_caballus.CM000403.2                               21372545 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3038611 0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3804 93 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  136422 0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  661629 0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1063 0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           248 100 -      8242 I
e Condylura_cristata.JH655891.1                           35804580 0 +  53390261 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16178 0 +     27315 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174210 98 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           809829 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       1533 4 +     36723 TTTT
s Gorilla_beringei.k141_3358147                               1895 4 -      8343 tttt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251386 4 - 186649187 tttt
i Gorilla_gorilla.LT578341.1                             C 0 I 53
s Hoolock_leuconedys.ctg274                                    139281 2 -    630532 tt--
i Hoolock_leuconedys.ctg274                                 C 0 I 285
s Hylobates_agilis.k141_1155965                               2316 2 +     12352 tt--
i Hylobates_agilis.k141_1155965                          C 0 I 33
s Hylobates_klossii.k141_738755                               9499 2 +     55766 tt--
i Hylobates_klossii.k141_738755                          C 0 I 33
s Hylobates_pileatus_b.LG02                                       2048839 2 + 191637585 tt--
i Hylobates_pileatus_b.LG02                                     I 2 I 33
s Hylobates_pileatus_a.tarseq_633                            7798171 2 +  11177569 tt--
i Hylobates_pileatus_a.tarseq_633                          I 2 I 33
s Nomascus_annamensis.k141_1771965                           50578 2 -    132029 tt--
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6673 2 -     16345 tt--
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12558 2 +     22201 tt--
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410893 2 -  22158432 tt--
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22956 2 -     54323 tt--
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_troglodytes.CM009242.2                               1468774 4 - 189151597 TTTT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pongo_abelii.CM009266.2                                   174400 4 - 189387572 tttt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189398 4 -   9816681 tttt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387865 2 +   1523678 tt--
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    41190 0 +    145209 C
e Echinops_telfairi.JH980293.1                            62850875 0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_171931              10580 0 -     14239 C
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862241 96 -  20541912 I
e Pygathrix_nigripes_a.k141_215492                              4825 0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  150448 0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             23955 0 +     91421 C
e Callibella_humilis.k141_1233062                             7454 2 +     18648 I
e Perodicticus_potto.k141_1854441                            14499 0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          22129 0 +     31479 C
e Otolemur_garnettii.GL873799.1                             348896 0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        35880 0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560273 0 - 199412804 C
e Nycticebus_coucang.k141_8166032                             1408 0 +      2758 C
e Nycticebus_bengalensis.LG01                             93632019 0 + 196305487 C
e Loris_tardigradus.ctg83                                  5040394 0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            6735 0 +     19643 C
e Galagoides_demidoff.k141_561628                            17659 17509 +     32986 T
e Galago_senegalensis.k141_991736                             4290 0 +     22493 C
e Galago_moholi.ctg3793                                     120749 0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       16686 0 -     45910 C
e Allochrocebus_solatus.k141_3554717                         15025 0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         13348 1 -     21945 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17402 24 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107724 24 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10395 25 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2569 95 +      5315 I
e Tupaia_tana.TupTan_flattened_line_394                       5209 0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1830681 0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         25894 0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102244 0 -    112863 C
e Ursus_maritimus.KK499267.1                                178621 0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              3731 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          1726 0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        36520 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1448673 0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195481 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11465886 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14351939 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5500 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23004 0 -     74585 C
e Lycaon_pictus.CM007581.1                                41611863 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810491 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913135 0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104278 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41612708 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          219583 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6222 0 -     23171 C
e CanFam4.chr16                                           42502592 0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2497 96 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412096 0 +  29979442 C
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Varecia_variegata.k141_289850                              21354 0 -    147434 C
e Varecia_rubra.k141_787544                                  22447 0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104549 0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58193 0 +     59866 C
e Trachypithecus_phayrei.ctg124                             252462 0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                         7223 0 -     13050 C
e Trachypithecus_melamera.k141_591572                          231 0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     6801 0 +     22490 C
e Trachypithecus_laotum.k141_928651                          25358 0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      27321 0 -     64340 C
e Trachypithecus_germaini.k141_57262                          6307 0 -     28527 C
e Trachypithecus_geei.k141_1001272                           25499 0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      25382 0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       17157 0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     30520 0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        17836 0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    477245 96 -    610378 I
e Theropithecus_gelada.CM009954.1                           350150 0 - 186847797 C
e Tarsius_wallacei.k141_226975                                4435 14 +     20590 I
e Tarsius_lariang.k141_1780720                                4396 14 +      6850 I
e Tapirus_terrestris.TapTer_scaffold_755                    102334 0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      188379 0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 285 24 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11221 104 +     22964 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             121761 0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1855993 0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Semnopithecus_vetulus.k141_244474                          25694 0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     22625 0 -     29113 C
e Semnopithecus_priam.k141_714795                            19945 0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12287 0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      25791 0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22272 0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113317 0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           5260 0 +     21866 C
e Sapajus_apella.ctg103                                     235670 0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1588 0 -      4301 C
e Saguinus_mystax.k141_8077960                                1209 0 +      5979 C
e Saguinus_midas.LG03                                       388527 0 - 209938924 C
e Saguinus_labiatus.k141_1571581                              1408 0 -      2099 C
e Saguinus_inustus.k141_2469308                               1262 0 +      5932 C
e Saguinus_imperator.k141_1898058                             1207 0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             1189 0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1179 0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72407 95 -    116970 I
e Rhinopithecus_strykeri.ctg102                             233393 0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104119133 0 + 195417433 C
e Rhinopithecus_bieti.k119_221883                            25785 0 +     27361 C
e Rhinolophus_sinicus.LVEH01000134.1                       2911041 105 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096091 0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3534959 101 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838398 95 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49427 96 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5584 0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       91948 0 -     98465 C
e Propithecus_perrieri.k141_1496898                          31677 0 +     46564 C
e Propithecus_edwardsi.k141_635656                            5351 0 -     30655 C
e Propithecus_diadema.k141_153680                             1616 0 -     11706 C
e Propithecus_coronatus.k141_209299                           1020 0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1563383 0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              41759 0 -     80239 C
e Presbytis_comata.k141_1230337                              24564 0 +     69807 C
e Plecturocebus_moloch.k141_1031110                          41406 0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          39938 0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      12022 0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          5086 0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          40042 0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          5088 0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     40389 0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       39996 0 -     87950 C
e Plecturocebus_brunneus.k141_862875                           595 0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        5508 0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29084 0 +     51125 C
e Pithecia_pithecia.tarseq_165                              554093 0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           29100 0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         29337 0 +     63561 C
e Pithecia_hirsuta.k141_640380                               29061 0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          3346 0 -     25401 C
e Pithecia_albicans.k141_1239476                             62226 0 +    207309 C
e Piliocolobus_tephrosceles.PDMG02035043.1                    2066 6 +      5737 I
e Piliocolobus_kirkii.k141_579682                            44387 2 +     45295 I
e Piliocolobus_gordonorum.k141_905727                        61788 2 -     63152 I
e Piliocolobus_badius.k141_2495623                            6081 1 +      7560 I
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12123 0 +     78924 C
e Papio_ursinus.k141_2278143                                 19229 0 -     23640 C
e Papio_papio.k141_799093                                    12419 0 +     16796 C
e Papio_kindae.k141_2214839                                  19283 0 -     27687 C
e Papio_hamadryas.Contig39                                  287667 0 -  20919399 C
e Papio_cynocephalus.k141_1507553                             6628 0 +     21308 C
e Papio_anubis.CM001495.2                                   240164 0 - 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969265 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18458540 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21214 0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125012 93 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              25930 0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117167 24 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   15355 0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176361 96 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mirza_zaza.k141_766280                                     49760 0 -     62432 C
e Miopithecus_ogouensis.k141_1534655                         19316 0 -     27822 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182184 96 +    200668 I
e Microcebus_murinus.CM007674.1                           74981902 0 +  93316391 C
e Mico_schneideri.k141_1877700                                     15961 2 -     26561 I
e Mico_humeralifer.k141_1180625                               8010 2 -     12984 I
e Mico_argentatus.k141_582562                                 7226 2 +     17804 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       147948 106 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Manis_pentadactyla.KN006162.1                             218000 0 +    317179 C
e Manis_javanica.JSZB01003497.1                             670709 0 -    737560 C
e Mandrillus_sphinx.Contig270                               354156 0 -    752769 C
e Mandrillus_leucophaeus.scaffold280                        319324 0 +  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220768 95 -    270270 I
e Macaca_tonkeana.k141_1880923                               32927 0 +     33478 C
e Macaca_thibetana.k99_41370                                 19194 0 +     21031 C
e Macaca_silenus.Contig273                                  267848 0 +    668171 C
e Macaca_siberu.k141_2185972                                 42014 0 +     59329 C
e Macaca_radiata.k141_3557992                                22259 0 +     24253 C
e Macaca_nigra.k141_2818840                                  45571 0 -     62418 C
e Macaca_nemestrina.KQ007038.1                              396440 0 +  25927173 C
e Macaca_mulatta.NC_041758.1                                411557 0 - 187317192 C
e Macaca_maura.k141_1103459                                  42983 0 +     51645 C
e Macaca_leonina.k141_321385                                 33245 0 -     50087 C
e Macaca_fuscata.k119_546792                                 22055 0 +     30527 C
e Macaca_fascicularis.k141_1397292                           19272 0 -     24934 C
e Macaca_cyclopis.k119_263443                                22169 0 +     30207 C
e Macaca_assamensis.Contig5                                 369849 0 -  60120075 C
e Macaca_arctoides.k141_1757516                              42221 0 -     61512 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               329936 0 -   1826925 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6294 0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          6301 0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              6290 0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          6293 0 +     29618 C
e Leontopithecus_rosalia.k141_349454                          8865 1 -     12945 I
e Leontopithecus_chrysomelas.k141_1327670                     7484 1 -     11567 I
e Leontocebus_nigricollis.k141_3905062                         848 0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           1217 0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        1266 0 -     13097 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Lagothrix_lagothricha.k141_246028                          40585 0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Indri_indri.k141_4600452                                     999 0 -      1527 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66057 0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47009 105 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547693 105 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                27601 0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16352 0 +     18121 C
e Felis_nigripes.FelNig_flattened_line_31944                 24624 0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113276 0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Erythrocebus_patas.Contig38                               259762 1 +  21539334 I
e Equus_przewalskii.KK951119.1                              409331 0 -    498745 C
e Equus_caballus.CM000403.2                               21372545 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3038611 0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3804 93 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  136422 0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  661629 0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        289942 0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1063 0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           248 100 -      8242 I
e Condylura_cristata.JH655891.1                           35804580 0 +  53390261 C
e Colobus_polykomos.k141_1559707                              5977 0 -      6605 C
e Colobus_guereza.LG01                                      375253 0 - 200372422 C
e Colobus_angolensis.KN981557.1                             406090 0 -   2368649 C
e Chlorocebus_sabaeus.CM001947.1                            301532 1 - 135778131 I
e Chlorocebus_pygerythrus.k141_3063162                        6818 1 -     44032 I
e Chlorocebus_aethiops.ctg25                                340207 1 +  18827391 I
e Chiropotes_sagulatus.k141_1113111                           5448 0 +     34062 C
e Chiropotes_israelita.k141_313004                           39876 0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           1181 0 +      5346 C
e Cheracebus_torquatus.k141_890198                           16795 0 +     39636 C
e Cheracebus_regulus.k141_471822                             17011 0 +    216457 C
e Cheracebus_lugens.k141_1179667                             16747 0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             6334 0 -     32913 C
e Cheirogaleus_medius.k141_759766                             2121 0 -     15404 C
e Cheirogaleus_major.k141_666340                             27934 0 -     33796 C
e Cercopithecus_roloway.k141_3012935                         19311 0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           22451 1 +     70610 I
e Cercopithecus_petaurista.k141_42573                          933 0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       24747 0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        28958 2 -     45857 I
e Cercopithecus_mona.ctg39                                  267502 0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  361758 0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                            9192 0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          24482 0 -     34525 C
e Cercopithecus_diana.k141_132293                             8794 0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           4538 0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        24602 0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          41539 0 -    148725 C
e Cercocebus_lunulatus.k141_2779015                          41556 0 -     44860 C
e Cercocebus_chrysogaster.k141_1522556                       41723 0 +     47900 C
e Cercocebus_atys.KQ010504.1                                137983 0 -   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16178 0 +     27315 C
e Cephalopachus_bancanus.k141_72622                            873 14 -      1636 I
e Cebus_unicolor.k141_1654760                                64431 0 -     89041 C
e Cebus_olivaceus.k141_1404781                                5336 0 -     34880 C
e Cebus_albifrons.Contig27                                  368447 0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               40235 2 +     53515 I
e Cebuella_niveiventris.k141_592277                           2349 2 -     12580 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Carlito_syrichta.NW_007259797.1                           267704 14 +    496798 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17063 2 -     18408 I
e Callithrix_jacchus.pat_scaffold_3                      165450770 2 + 189096842 I
e Callithrix_geoffroyi.k119_473390                           15815 2 +     17162 I
e Callimico_goeldii.k141_1609886                              7127 2 -     13885 I
e Cacajao_melanocephalus.k141_619699                         17969 0 +    119600 C
e Cacajao_hosomi.k141_81245                                  18056 0 +     95584 C
e Cacajao_calvus.k141_89051                                  40530 0 -     91139 C
e Cacajao_ayresi.k141_96119                                   5236 0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3504 0 -     19611 C
e Avahi_laniger.k141_2756659                                  3503 0 +     11645 C
e Ateles_paniscus.k141_866194                                20328 0 -     33135 C
e Ateles_marginatus.k141_970259                              46269 0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              30897 0 +     44353 C
e Ateles_chamek.k141_615173                                   3344 0 -     28759 C
e Ateles_belzebuth.k141_1572163                               8208 0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               272040 0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Aotus_vociferans.k141_944972                                6596 0 +      8415 C
e Aotus_trivirgatus.k141_192090                              21460 0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                669818 0 +   5030052 C
e Aotus_griseimembra.k141_982342                             41805 0 +     43593 C
e Aotus_azarae.k141_118258                                   48060 3 -     65372 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174210 98 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30241 0 +     42133 C
e Alouatta_puruensis.k141_251022                              6102 0 +     30854 C
e Alouatta_palliata.k141_638677                              43978 0 +     70886 C
e Alouatta_nigerrima.k141_376068                             38279 0 +     45454 C
e Alouatta_macconnelli.k141_361275                           21296 0 -     24835 C
e Alouatta_juara.k141_1687208                                39650 0 -     64179 C
e Alouatta_discolor.k141_2561099                             41212 0 +     55831 C
e Alouatta_caraya.k141_1109140                               41762 0 -     78289 C
e Alouatta_belzebul.k141_1011583                             69533 0 -     84148 C
e Allochrocebus_lhoesti.k141_441277                          40642 1 +     44087 I
e Allenopithecus_nigroviridis.k141_3755588                   44821 0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           809829 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       1537 54 +     36723 ATT-C-TAACGTTTCACC--------GCTTC-TTTCTCTGAGTTCTTATATTTCTGC---------TTCATGGT
s Allenopithecus_nigroviridis.k141_3755588                   44821 54 +     53615 ttt-c-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40643 54 +     44087 ttt-t-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Allochrocebus_lhoesti.k141_441277                      I 1 C 0
s Allochrocebus_preussi.k141_1993939                         13349 54 -     21945 ttt-t-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Allochrocebus_preussi.k141_1993939                     I 1 C 0
s Allochrocebus_solatus.k141_3554717                         15025 54 +     32033 ttt-t-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69533 54 -     84148 ctc-t-tgttgtttcacc--------acttc-tttatctgagttcttgcatttctgc---------ttcacagt
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41762 54 -     78289 ctc-t-tgttgtttcacc--------acttc-tttatctgagttcttacatttctgc---------ttcacggt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41212 54 +     55831 ctc-t-tgttgtttcacc--------acttc-tttatctgagttcttgcatttctgc---------ttcacagt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39650 54 -     64179 ctc-t-tgttgtttcacc--------acttc-tttatctgagttcttacatttctgc---------ttcacggt
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21296 54 -     24835 ctc-t-tgttgtttcacc--------acttc-tttatctgagttcttacatttctgc---------ttcacggt
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38279 54 +     45454 ctc-t-tgttgtttcacc--------acttc-tttatctgagttcttacatttctgc---------ttcatggt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              43978 54 +     70886 ctc-t-tgttgtttcgcc--------acttc-tttatctgagttcttgcatttctgc---------ttcacggt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6102 54 +     30854 ctc-t-tgttgtttcacc--------acttc-tttatctgagttcttacatttctgc---------ttcacggt
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30241 54 +     42133 ctc-t-tgttgtttcacc--------acttc-tttatctgagttcttacatttctgc---------ttcacggt
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   48063 49 -     65372 -------attgtttcacc--------acttc-tttatctaagttcttatatttctgc---------ttcacggt
i Aotus_azarae.k141_118258                               I 3 C 0
s Aotus_griseimembra.k141_982342                             41805 54 +     43593 ctc-t-tattgtttcacc--------acctc-tttatctaagttcttatatttctgc---------ttcacggt
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669818 54 +   5030052 ctc-t-tattgtttcACC--------ACTTC-TTTATCTAAGTTCTTATATTTCTGC---------TTCACGGT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21460 54 -     23494 ctc-t-tattgtttcacc--------acttc-tttatctaagttcttatatttctgc---------ttcacggt
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6596 54 +      8415 ctc-t-tattgtttcacc--------acttc-tttatctaagttcttatatttctgc---------ttcacggt
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16686 46 -     45910 gtc-t-tattgttttacc--------tcttc-tttc-ctgagttcttgtatctctgc----------------t
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272040 54 +  21539123 ctc-t-tgttgtttcacc--------acttc-tttacctgagttcttacatttctgc---------ttcacggt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8208 54 +     48076 ctc-t-tgttgtttcacc--------acttc-ttcacctgagttcttacatttctgc---------ttcacggt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3344 54 -     28759 ctc-t-tgttgtttcacc--------acttc-tttacctgagttcttacatttctgc---------ttcacggt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30897 54 +     44353 ctc-t-tgttgtttcacc--------acttc-tttacctgagttcttacatttctgc---------ttcacggt
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46269 54 -     71267 ctc-t-tgttgtttcacc--------acttc-ttcacctgagttctTACATTTCTGC---------TTCACGGT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20328 54 -     33135 ctc-t-tgttgtttcacc--------acttc-ttcacctgagttcttacatttctgc---------ttcacagt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3503 51 +     11645 ctc-t-tatggtttcaac--------atgtc-ttcc-ctgagttcttcta--tctgc---------ttcatggt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3504 51 -     19611 ctc-t-tatggtttcaac--------atgtc-ttcc-ctgagttcttcta--tctgc---------ttcatggt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5236 54 +     28062 ctc-t-tattgtttcacc--------acttc-tttatctgagctctTGTGTTTCTGC---------TTCATTGT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40530 54 -     91139 ctc-t-tattgtttcacc--------acttc-tttatctgagctctTGTGTTTCTGC---------TTCATTGT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18056 54 +     95584 ctc-t-tattgtttcacc--------acttc-tttatctgagctcttgtgtttctgc---------ttcattgt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         17969 54 +    119600 ctc-t-tattgtttcacc--------acttc-tttatctgagctcttgtgtttctgc---------ttcattgt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7456 51 +     18648 --c-t-tatcgtttcacc--------acttc-tt-atctgagttcttacatttctgc---------ttcacgat
i Callibella_humilis.k141_1233062                        I 2 C 0
s Callimico_goeldii.k141_1609886                              7129 51 -     13885 --c-t-tatcgtttcacc--------acttc-tttatctgagttcttacatttctgc---------t-cacgGT
i Callimico_goeldii.k141_1609886                         I 2 C 0
s Callithrix_geoffroyi.k119_473390                           15817 51 +     17162 --t-t-tattgtttcacc--------acttc-tt-atctgagttcttacatttctgc---------ttcacggt
i Callithrix_geoffroyi.k119_473390                       I 2 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450772 51 + 189096842 --C-T-TATTGTTTCACC--------ACTTC-TT-ATCTGAGTTCTTACATTTCTGC---------TTCACGGT
i Callithrix_jacchus.pat_scaffold_3                      I 2 C 0
s Callithrix_kuhlii.k119_404482                              17065 51 -     18408 --c-t-tattgtttcacc--------acttc-tt-atctgagttcttacatttctgc---------ttcacggt
i Callithrix_kuhlii.k119_404482                          I 2 C 0
s Carlito_syrichta.NW_007259797.1                           267718 27 +    496798 --------------------------------ttttatttacttctt-tgtttctat---------ctt-----
i Carlito_syrichta.NW_007259797.1                        I 14 C 0
s Cebuella_niveiventris.k141_592277                           2351 51 -     12580 --c-t-tatcgtttcacc--------acttc-tt-atctgagttcttacatttctgc---------ttcacgat
i Cebuella_niveiventris.k141_592277                      I 2 C 0
s Cebuella_pygmaea.k141_145798                               40237 51 +     53515 --c-t-tattgtttcacc--------acttc-tt-atctgagttcttacatttctgc---------ttcacgat
i Cebuella_pygmaea.k141_145798                           I 2 C 0
s Cebus_albifrons.Contig27                                  368447 54 -  26074798 ctc-t-tattgtttcact--------acttc-tttatctgagttcttacatttccgc---------ttcacagt
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5336 54 -     34880 ctc-t-tattgtttcact--------acttc-tttatctgagttcttacatttccgc---------ttcacagt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64431 54 -     89041 ctc-t-tattgtttcact--------acttc-tttatctgagttcttacatttccgc---------ttcacagt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                            887 27 -      1636 --------------------------------TTTTATTTACTTCTT-TGTTTCTAT---------CTT-----
i Cephalopachus_bancanus.k141_72622                      I 14 C 0
s Cercocebus_atys.KQ010504.1                                137983 54 -   4669795 ttc-c-taatgtttcACC--------ACTGC-TTTCTCTGAGTCCTTATATTTCTGC---------TTCATGGT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41723 54 +     47900 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41556 54 -     44860 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41539 54 -    148725 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24602 54 -     40656 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4538 54 +     20796 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8794 54 -     17524 ttc-c-taacgtttcacc--------actgt-tttctctgagtccttatatttctgc---------ttcatggt
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24482 54 -     34525 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9192 54 -     25376 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361758 54 -  39242232 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267502 54 +  21565898 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        28960 54 -     45857 ttt-t-taacatttcacc--------actgc-tttctccgagtccttatatttctgc---------ttcatggt
i Cercopithecus_neglectus.k141_858615                    I 2 C 0
s Cercopithecus_nictitans.k141_2995370                       24747 54 -     32606 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          933 54 +      8499 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22452 54 +     70610 ttt-t-taacgtttcacc--------actgc-tttctccgagtccttatatttctgc---------ttcatggt
i Cercopithecus_pogonias.k141_6079                       I 1 C 0
s Cercopithecus_roloway.k141_3012935                         19311 54 +     36323 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             27934 51 -     33796 ctc-t-tgtggtttcacc--------acttc-ttcc-ctgagttcttata--tctgc---------ttcatggt
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2121 51 -     15404 ctc-t-tgtggtttcacc--------acttc-ttcc-ctgagttcttata--tctgc---------ttcgtggt
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6334 54 -     32913 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttatatttctgc---------ttcatagt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16747 54 -     40346 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttatatttctgc---------ttcatagt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17011 54 +    216457 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttatatttctgc---------ttcatagt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16795 54 +     39636 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttatatttctgc---------ttcatagt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1181 54 +      5346 ctg-t-taccgtttcacc--------acttc-tccatctgagttcctacgtttccgc---------ttcgcggt
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           39876 54 -    112038 ctc-t-tattgtttcagc--------acttc-tttatctgagttcttgtgtttctgc---------ttcatcgt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5448 54 +     34062 ctc-t-tattgtttcagc--------acttc-tttatctgagttcttgtgtttctgc---------ttcatcgt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340208 54 +  18827391 ttt-t-taacgtttcacc--------actac-tttctctgagtccttatatttctgc---------ttcatagt
i Chlorocebus_aethiops.ctg25                             I 1 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6819 54 -     44032 ttt-t-taacgtttcacc--------actac-tttctctgagttcttatatttctgc---------ttcatggt
i Chlorocebus_pygerythrus.k141_3063162                   I 1 C 0
s Chlorocebus_sabaeus.CM001947.1                            301533 54 - 135778131 ttt-t-taacgtttcaCC--------ACTAC-TTTCTCTGAGTCCTTATATTTCTGC---------TTCATGGT
i Chlorocebus_sabaeus.CM001947.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                             406090 54 -   2368649 TTC-C-TAACGTTTCACC--------ACTGC-TTTCTCTGAGTCCTTATATTTCTGC---------TTCATGGT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375253 54 - 200372422 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              5977 54 -      6605 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289942 53 +  12879189 ctc-t-tattgcttcacc--------acttc-ttcc-ctgagttcttatatttctgc---------ttcatggt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                               259763 55 +  21539334 ttt-tttaacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Erythrocebus_patas.Contig38                            I 1 C 0
s Galago_moholi.ctg3793                                     120749 43 -    137831 ctc-t-tattgtttttcc--------tcttc-t----ctgagttcttatatctctgc----------------t
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4290 43 +     22493 ctc-t-tattgtttttcc--------tcttc-t----ctgagttcttatatctctgc----------------t
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16352 53 +     18121 ctc-t-gattgtttcacc--------atttc-tttc-ttgaattcttatatttctgc---------ttcatgga
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1899 54 -      8343 att-c-taacgtttcacc--------acttc-tttctctgagttcttatatttctgc---------ttcatggt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 67440 54 +  33314783 att-c-taacgtttcacc--------acttc-tttctctgagttcttatatttctgc---------ttcatggt
i Gorilla_gorilla.LT578336.1                             I 271 I 290
s Hoolock_leuconedys.ctg274                                    139568 62 -    630532 att-t-ttgtacttcttctaggttcaccttcatttctatgaatattt-tggtttttc---------ttcatgtt
i Hoolock_leuconedys.ctg274                                 I 285 I 60
s Indri_indri.k141_4600452                                     999 51 -      1527 ctc-t-tgtggtttcaac--------acttc-ttcc-ctgagttcttcta--tctgc---------ttcatggt
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40585 54 +    110728 ctc-t-tattgtttcacc--------acttc-tttacctgagttcttatatttctgc---------ttcacggt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1266 54 -     13097 CTC-T-TACCGTTCCACC--------ACTTC-TTTATCTGAGTTCTTACATTTCCGC---------TTCGCGGT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1217 54 +      5940 CTC-T-TACCGTTCCACC--------ACTTC-TTTATCTGAGTTCTTACATTTCCGC---------TTCGCGGT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         848 54 -      5717 ctc-t-taccgttcctcc--------acttc-tttatctgagttctcacatttccgc---------ttcgcggt
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7485 52 -     11567 --c-t-tatcatttcacc--------acttc-tttatctgagttcttacatttccgc---------ttcactgt
i Leontopithecus_chrysomelas.k141_1327670                I 1 C 0
s Leontopithecus_rosalia.k141_349454                          8866 52 -     12945 --c-t-tatcatttcacc--------acttc-tttatctgagttcttacatttctgc---------ttcactgt
i Leontopithecus_rosalia.k141_349454                     I 1 C 0
s Lepilemur_ankaranensis.k141_567626                          6293 51 +     29618 ctc-t-tgtggtttcgcc--------acttc-ttcc-ccgagttcttcta--tctgc---------ttcatggt
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6290 51 +     31569 ctc-t-tgtggtttcgcc--------acttc-ttcc-ccgagttcttcta--tctgc---------ttcatggt
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6301 51 +     24756 ctc-t-tgtggtttcgcc--------acttc-ttcc-ctgagttcttcta--tctgc---------ttcatggt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6294 51 +     16388 ctc-t-tgtggtttcgcc--------acttc-ttcc-ccgagttcttcta--tctgc---------ttcatggt
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               329936 54 -   1826925 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            6735 46 +     19643 ctc-t-tattgtttcacc--------tcttc-tttc-ctgagttcttgtatctctgc----------------t
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5040394 46 -   6120653 ctc-t-tattgtttcacc--------tcttc-tttc-ctgagttcttgtatctctgc----------------t
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_1757516                              42221 54 -     61512 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369849 54 -  60120075 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22169 54 +     30207 ttt-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19272 54 -     24934 ttt-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22055 54 +     30527 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33245 54 -     50087 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  42983 54 +     51645 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411557 54 - 187317192 ttt-c-taatgtttcacC--------ACTGC-TTTCTCTGAGTCCTTATATTTCTGC---------TTCATGGT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396440 54 +  25927173 ttc-c-taatgtttcACC--------ACTGC-TTTCTCTGAGTCCTTATATTTCTGC---------TTCATGGT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45571 54 -     62418 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatagt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22259 54 +     24253 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42014 54 +     59329 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267848 54 +    668171 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19194 54 +     21031 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32927 54 +     33478 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319324 54 +  24302211 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354156 54 -    752769 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_582562                                 7228 51 +     17804 --c-t-tatcgtttcacc--------acttc-tt-atctgagttcttacatttctgc---------ttcacgat
i Mico_argentatus.k141_582562                            I 2 C 0
s Mico_humeralifer.k141_1180625                               8012 51 -     12984 --c-t-tatcgtttcacc--------acttc-tt-atctgagttcttacatttttgc---------ttcacgat
i Mico_humeralifer.k141_1180625                          I 2 C 0
s Mico_schneideri.k141_1877700                                     15963 51 -     26561 --c-t-tatcgtttcacc--------acttc-tt-atctgagttcttacatttctgc---------ttcacgat
i Mico_schneideri.k141_1877700                                 I 2 C 0
s Microcebus_murinus.CM007674.1                           74981902 51 +  93316391 CTC-T-TGTGGTTTCACC--------ACTTC-TTCC-CTGAGTTCTTATA--TCTGC---------TTCGTGGT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19316 54 -     27822 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttgtatttctgc---------ttcatggt
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     49760 51 -     62432 ctc-t-tgtggtttcacc--------acttc-ttcc-ctgagttcttata--tctgc---------ttcatggt
i Mirza_zaza.k141_766280                                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              25930 54 +     34575 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcttggt
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           50580 54 -    132029 ttt-c-taacgtttcacc--------acttc-tttctctgagttcttatatttcttc---------ttcatggt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6675 54 -     16345 ttt-c-taacgtttcacc--------acttc-tttctctgagttcttatatttcttc---------ttcatggt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12560 54 +     22201 ttt-c-taacgtttcacc--------acttc-tttctctgagttcttatatttcttc---------ttcatggt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410895 54 -  22158432 ttt-c-taacgtttcacc--------acttc-tttctctgagttcttatatttcttc---------ttcatggt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  22958 54 -     54323 ttt-c-taacgtttcacc--------acttc-tttctctgagttcttatatttcttc---------ttcatggt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93632019 46 + 196305487 ctc-t-tattgtttcgcc--------tcttc-tttc-ctgagttcttgtatctctac----------------t
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1408 46 +      2758 ctc-t-tattgtttcgcc--------tcttc-tttc-ctgagttcttgtatctctac----------------t
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560273 46 - 199412804 ctc-t-tattgttacgcc--------tcttc-tttc-ctgagttcttgtatctctgc----------------t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        35880 46 -     51505 ctc-t-tattgtttttcc--------tcttc-ttcc-ctgagttcttatatctctgc----------------t
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             348896 46 +   1103335 CTC-t-tattgtttttcc--------tcttc-ttcc-ctgagTTCTTAGATCTCTGC----------------T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1468778 54 - 189151597 ATT-C-TAACGTTTCACC--------ACTTC-TTTCTCTGAGTTCTTATATTTCTGC---------TTCATGGT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   240164 54 - 183742232 ttc-c-taatgtttcACC--------ACTGC-TTTCTCTGAGTCCTTATATTTCTGC---------TTCATGGT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6628 54 +     21308 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287667 54 -  20919399 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19283 54 -     27687 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12419 54 +     16796 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19229 54 -     23640 ttc-c-taatgtttcacc--------actgc-tttctctgagtccttatatttctgc---------ttcatggt
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22129 46 +     31479 gtc-t-tattgtttcacc--------tcttc-tttc-ctgatttcttgtatctctgc----------------t
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14499 46 -     24908 gtc-t-tattgtttcacc--------tcttc-tttc-ctgatttcttgtatctctgc----------------t
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            6082 54 +      7560 ttc-c-taacgtttcacc--------gctgc-tttctgtgagtccttatatttctgc---------ttcatggt
i Piliocolobus_badius.k141_2495623                       I 1 C 0
s Piliocolobus_gordonorum.k141_905727                        61790 54 -     63152 ttc-c-taacgtttcacc--------gctgc-tttctgtgagtccttatatttctgc---------ttcatggt
i Piliocolobus_gordonorum.k141_905727                    I 2 C 0
s Piliocolobus_kirkii.k141_579682                            44389 54 +     45295 ttc-c-taacgtttcacc--------gctgc-tttctgtgagtccttatatttctgc---------ttcatggt
i Piliocolobus_kirkii.k141_579682                        I 2 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2067 54 +      5735 ttc-c-taacgTTTCACC--------GCTGC-TTTCTGTGAGTCCTTATATTTCTGC---------TTCATGGT
i Piliocolobus_tephrosceles.PDMG02034973.1               I 6 C 0
s Pithecia_albicans.k141_1239476                             62226 54 +    207309 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttgtgtttctgc---------ttcatcgt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3346 54 -     25401 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttgtgtttctgc---------ttcatcgt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29061 54 +     58159 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttgtgtttctgc---------ttcatcgt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29337 54 +     63561 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttgtgtttctgc---------ttcatcgt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29100 54 +     51148 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttgtgtttctgc---------ttcatcgt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554093 54 -   4542175 ctc-t-tattttttcacc--------acttc-tttatctgagttctTGTGTTTCTGC---------TTCATCGT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29084 54 +     51125 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttgtgtttctgc---------ttcatcgt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5508 54 +     39866 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttatattgctgc---------ttcacagt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           595 54 -      9282 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttatattgctgc---------ttcatagt
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       39996 54 -     87950 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttatatttctgc---------ttcatagt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40389 54 -     88961 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttatatttctgc---------ttcatagt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5088 54 -     39403 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttatatttctgc---------ttcatagt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40042 54 +     87928 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttatattgctgc---------ttcatagt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5086 54 -     60166 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttatattgctgc---------ttcacagt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12022 54 -     67232 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttatattgctgc---------ttcacagt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39938 54 -     90634 ctc-t-tattgtttcacc--------acttc-tttatctaagttctTATATTGCTGC---------TTCACAGT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41406 54 +     89403 ctc-t-tattgtttcacc--------acttc-tttatctgagttcttatattgctgc---------ttcacagt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174404 55 - 189387572 tttcc-taacgtTTCACC--------ACTTC-TTTCTCTGAGTTCTTATATTTCTGC---------TTCATGGT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189402 55 -   9816681 tttcc-taacgtttcacc--------acttc-tttctctgagttcttatatttctgc---------ttcatggt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24564 54 +     69807 ttc-c-tgacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41759 54 -     80239 ttc-c-tgacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563383 51 -   2598838 CTC-T-TATGGTTTTAAC--------ACGTG-TTCC-CTGAGTTCTTCTA--TCTGC---------TTTGTGAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1020 51 -      7103 ctc-t-tatggtttcaac--------acgtg-ttcc-ctgagttcttcta--tctgc---------ttcatggt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1616 51 -     11706 ctc-t-tatggtttcaac--------atgtg-ttcc-ctgagttcttcta--tctgc---------ttcgtggt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5351 51 -     30655 ctc-t-tatggtttcaac--------atgtg-ttcc-ctgagttcttcta--tctgc---------ttcgtggt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31677 51 +     46564 ctc-t-tatggtttcaac--------acatg-ttcc-ctgagttcttcta--tctgc---------ttcatggt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       91948 51 -     98465 ctc-t-tacggttttaac--------acgtg-ttcc-ctgagttcttcta--tctgc---------tttgtgat
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5584 51 +     35169 ctc-t-tatggtttcaac--------acgtg-ttcc-ctgagttcttcta--tctgc---------ttcgtggt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             23955 54 +     91421 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150448 54 -   7812017 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4825 54 +     72585 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_221883                            25785 54 +     27361 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119133 54 + 195417433 TTC-C-TAACGTTTCACC--------ACTGC-TTTCTCTGAGTCCTTACATTTCTGC---------TTCATGGt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233393 54 -   7961872 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               1179 54 +     27962 ctg-t-taccgtttcacc--------acttc-tccatctgagttcctacgtttccgc---------ttcgcggt
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1189 54 +      6077 CTG-T-TACCATTTCACC--------ACTTC-TTCATCTGAGTTCGTACATTTCCGC---------TTCGCGGT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1207 54 +      5971 CCG-T-TACCGTTTCACC--------ACTTC-TTCATCTGAGTTCTTACATTTCCGC---------TTCGCGGT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1262 54 +      5932 CTG-T-TACCGTTTCACC--------ACTTC-TTCATCTGAGTTCTTACATTTCCGC---------TTCGCGGT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1408 54 -      2099 ccg-t-taccgtttcacc--------acttc-ttcacctgagttcttacatttccgc---------ttcgcggt
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388527 54 - 209938924 ctg-t-taccgtttcacc--------acttc-ttcatctgagttcccacatttccgc---------ttcgcggt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1209 54 +      5979 ctg-t-taccgtttcacc--------acttc-ttcatctgagttcttacatttccgc---------ttcgcggt
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1588 54 -      4301 CTG-T-TACCATTTCACC--------ACTTC-TTCATCTGAGTTCGTACATTTCCGC---------TTCGCGGT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235670 54 +   5703754 ctc-t-tattgtttcatt--------acttc-tttatctgagttcttacatttctgc---------ttcgcagc
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5260 54 +     21866 ctc-t-tattgtttcatt--------acttc-tttatctgagttcttacatttctgc---------ttcgcagc
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         22272 54 +     27374 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25791 54 +     58920 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12287 54 -     45317 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19945 54 -     42441 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22625 54 -     29113 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25694 54 -     48123 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387867 54 +   1523678 ttt-c-taacgtttcacc--------acttc-tttctctgagttcttatatttcttc---------ttcatggt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                4410 27 +      6850 --------------------------------TTTTATTTACTTCTT-TGTTTCTAT---------CTT-----
i Tarsius_lariang.k141_1780720                           I 14 C 0
s Tarsius_wallacei.k141_226975                                4449 27 +     20590 --------------------------------TTTTATTTACTTCTT-TGTTTCTAT---------CTT-----
i Tarsius_wallacei.k141_226975                           I 14 C 0
s Theropithecus_gelada.CM009954.1                           350150 54 - 186847797 ttc-c-taatgtttcACC--------ACTGC-TTTCTCTGAGTCCTTATATTTCTGC---------TTCATGGT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        17836 54 +     26378 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30520 54 -     78344 ttc-c-taacgtttcacc--------acttt-tttctctgagtccttacatttctgc---------ttcatggt
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17157 54 +     25722 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25382 54 -     62838 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25499 54 +     46913 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6307 54 -     28527 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27321 54 -     64340 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25358 54 -     63452 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6801 54 +     22490 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          231 54 -      6147 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7223 54 -     13050 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252462 54 -   6242583 ttc-c-taacgtttcacc--------acttt-tttctctgagtccttacatttctgc---------ttcatggt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58193 54 +     59866 ttc-c-taacgtttcacc--------actgc-tttctctgagtccttacatttctgc---------ttcatggt
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830681 57 -   4065304 ctc-t-t---attttacc--------acttt-gtcc-ctgagtgcttatatttttgtctt--atattccatggc
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5209 59 -     70247 ctc-t-t---atcttacc--------acttt-gtcc-ctgagtgcttatatttctgccttttatattccatggc
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  22447 51 -     30710 ctc-t-tgtgatttcacc--------atttc-ttcc-ctgagttcttata--tctgc---------ttcatggt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21354 51 -    147434 ctc-t-tgtgatttcacc--------atttc-ttcc-ctgagttcttata--tctgc---------ttcatggt
i Varecia_variegata.k141_289850                          C 0 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    41190  0 +    145209 C
e Echinops_telfairi.JH980293.1                            62850875  0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_171931              10580  0 -     14239 C
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862241 96 -  20541912 I
e Galagoides_demidoff.k141_561628                            17659 17509 +     32986 T
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17402 24 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107724 24 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10395 25 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2569 95 +      5315 I
e Zalophus_californianus.ZalCal_flattened_line_17732         25894  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102244  0 -    112863 C
e Ursus_maritimus.KK499267.1                                178621  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              3731  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          1726  0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        36520  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1448673  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195481  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11465886  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14351939  0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5500  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23004  0 -     74585 C
e Lycaon_pictus.CM007581.1                                41611863  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810491  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913135  0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104278  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41612708  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          219583  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6222  0 -     23171 C
e CanFam4.chr16                                           42502592  0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2497 96 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412096  0 +  29979442 C
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104549  0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    477245 96 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    102334  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      188379  0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 285 24 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11221 104 +     22964 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             121761  0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1855993  0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113317  0 +    313613 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72407 95 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2911041 105 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096091  0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3534959 101 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838398 95 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49427 96 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12123  0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969265  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18458540  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21214  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125012 93 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117167 24 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   15355  0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176361 96 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182184 96 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       147948 106 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Manis_pentadactyla.KN006162.1                             218000  0 +    317179 C
e Manis_javanica.JSZB01003497.1                             670709  0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220768 95 -    270270 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798173 33 +  11177569 I
e Hylobates_pileatus_b.LG02                                       2048841 33 + 191637585 I
e Hylobates_klossii.k141_738755                               9501 33 +     55766 I
e Hylobates_agilis.k141_1155965                               2318 33 +     12352 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66057  0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47009 105 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547693 105 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                27601  0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 24624  0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113276  0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Equus_przewalskii.KK951119.1                              409331  0 -    498745 C
e Equus_caballus.CM000403.2                               21372545  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3038611  0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3804 93 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  136422  0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  661629  0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1063  0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           248 100 -      8242 I
e Condylura_cristata.JH655891.1                           35804580  0 +  53390261 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16178  0 +     27315 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174210 98 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           809829  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       1591  98 +     36723 CTTC---------------------CA-TTTTT-GATCTGACAGCTCCATTAAGTTTTCATTTCATGGCAA-------------AATATTTGGGTAACATTTT-CAT-------CTTGCTTTT-GGCATTG-----ATTTTTGTTGTG
s Allenopithecus_nigroviridis.k141_3755588                   44875  98 +     53615 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40697  98 +     44087 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13403  98 -     21945 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cgt-------cttgatttt-ggcattg-----atttttgttgtg
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15079  98 +     32033 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69587  97 -     84148 cttc---------------------cg-tttcc-gatctgatggttccattaagttttcatttcatggcca-------------aatatttgagtagcatttt-cat-------cttgccttt-ggtattg-----g-ttttgttgtg
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41816  97 -     78289 cttc---------------------cg-tttct-gatctgatggttccattaagttttcatttcatggcca-------------aatatttgagtagcatttt-cat-------cttgccttt-ggtattg-----a-ttttgttgtg
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41266  97 +     55831 cttc---------------------cg-tttcc-gatctgatggttccattaagttttcatttcatggcca-------------aatatttgagtagcatttt-cat-------cttgccttt-ggtattg-----g-ttttgttgtg
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39704  97 -     64179 cttc---------------------cg-tttct-gatctgatggttccattaagttttcatttcatggcca-------------aatatttgagtaacatttt-cat-------cttgccttt-ggtattg-----g-ttttgttgtg
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21350  97 -     24835 cttc---------------------cg-tttct-gatctgatggttccattaagttttcatttcatggcca-------------aatatttgagtaacatttt-cat-------cttgccttt-ggtattg-----a-ttttattgtg
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38333  97 +     45454 cttc---------------------cg-tttct-gatctgatggttccattaagtttttatttcatggcca-------------aatatttgagtaacatttt-cat-------cttgccttt-ggtattg-----a-ttttattgtg
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44032  97 +     70886 cttc---------------------ca-tttct-gatctgatggttccattaagttttcatttcatggcca-------------aatatttgagtaacatttt-cat-------cttgccttt-ggtattg-----a-ttttgttgtg
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6156  97 +     30854 cttc---------------------cg-tttct-gatctgatggttccattaagttttcatttcatggcca-------------aatatttgagtaacatttt-cat-------cttgccttt-ggtattg-----a-ttttattgtg
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30295  97 +     42133 cttc---------------------cg-tttct-gatctgatggttccattaagttttcatttcatggcca-------------aatatttgagtaacatttt-cat-------cttgccttt-ggtattg-----a-ttttattgtg
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   48112  98 -     65372 cttc---------------------ca-ttttt-gatctgatggctcctttaagttttcatttcatggcca-------------aatatttgagtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41859  98 +     43593 cttc---------------------ca-ttttt-gatctgatggctcctttaagttttcatttcatggcca-------------aatatttgagtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669872  98 +   5030052 CTTC---------------------CA-TTTTT-GATCTGATGGCTCctttaagttttcatttcatgGCCA-------------AATATTTGAGTAACATTTT-CAT-------CTTGCTTTT-GGCATTG-----ATTTTTGTTGTG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21514  98 -     23494 cttc---------------------ca-ttttt-gatctgatggctcctttaagttttcatttcatggcca-------------aatatttgagtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6650  98 +      8415 cttc---------------------ca-ttttt-gatctgatggctcctttaagttttcatttcatggcca-------------aatatttgagtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       16732  97 -     45910 cttc---------------------aa-ttttt-gataggaccacttcattaagttttcatttcatggcaa-------------aatatttggataaa-tttc-ttt-------ttatttgtt-gaaacag-----agtctcattttg
i Arctocebus_calabarensis.k141_1364444                   C 0 I 618
s Ateles_geoffroyi_b.tarseq_1536                               272094  97 +  21539123 cttc---------------------cg-tttct-gatctgatggctccattaagtttccatttcatggcca-------------aatatttcagtaacatttt-cat-------cttgctttt-ggcattg-----a-ttttgttgtg
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8262  96 +     48076 cttc----------------------g-tttct-gatctgatggctccattaagtttccatttcatggcca-------------aatatttcagtaacatttt-cat-------cttgctttt-ggcattg-----a-ttttgttgtg
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3398  97 -     28759 cttc---------------------cg-tttct-gatctgatggctccattaagtttccatttcatggcca-------------aatatttcagtaacatttt-cat-------cttgctttt-ggcattg-----a-ttttgttgtg
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              30951  97 +     44353 cttc---------------------cg-tttct-gatctgatggctccattaagtttccatttcatggcca-------------aatatttcagtaacatttt-cat-------cttgctttt-ggcattg-----a-ttttgttgtg
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46323  96 -     71267 CTT----------------------CG-TTTCT-GATCTGATGGCTCCATTAAGTTTCCATTTCATGGCCA-------------AATATTTCAGTAACATTTT-CAT-------CTTGCTTTT-GGCATTG-----A-TTTTGTTGTG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20382  96 -     33135 cttc----------------------g-tttct-gatctgatggctccattaagtttccatttcatggcca-------------aatatttcagtaacatttt-cat-------cttgctttt-ggcattg-----a-ttttgttgtg
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3554  98 +     11645 tttc---------------------tg-ttttt-gatgtgacaacttcattaaattttgatttcacggcaa-------------aatatttgggtaaattttt-cat-------cttgtcttt-ggcaatg-----atttttgttgta
i Avahi_laniger.k141_2756659                             C 0 I 3
s Avahi_peyrierasi.k141_1823318                               3555  98 -     19611 tttc---------------------tg-ttttt-gatgtgacaacttcattaaattttgatttcacggcaa-------------aatatttgggtaaattttt-cat-------cttgtcttt-ggcaatg-----atttttgttgta
i Avahi_peyrierasi.k141_1823318                          C 0 I 3
s Cacajao_ayresi.k141_96119                                   5290  90 +     28062 CTTC---------------------CG-TTTTT-GACCTGATGGCTCCACGGAGTTTTCCTTTCACGGCCC-------------AGTGTTTGAGTAGCA-TTT-CGT-------CTCGCTTTT-GGCATGG-----ATTTT-------
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40584  90 -     91139 CTTC---------------------CG-TTTTT-GACCTGATGGCTCCACGGAGTTTTCCTTTCACGGCCC-------------AGTGTTTGAGTAGCA-TTT-CGT-------CTCGCTTTT-GGCATGG-----ATTTT-------
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18110  90 +     95584 cttc---------------------cg-ttTTT-GACCTGATGGCTCCACGGAGTTTTCCTTTCACGGCCC-------------AGTGTTTGAGTAGCA-TTT-CGT-------CTCGCTTTT-GGCATGG-----ATTTT-------
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18023  90 +    119600 cttc---------------------cg-ttTTT-GACCTGATGGCTCCACGGAGTTTTCCTTTCACGGCCC-------------AGTGTTTGAGTAGCA-TTT-CGT-------CTCGCTTTT-GGCATGG-----ATTTT-------
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7507  98 +     18648 cttc---------------------cg-ttttt-gatctgatggctcctttcagttttcatttcatggcca-------------gatatttgagtaacatttt-cat-------ctttccttc-ggcattg-----atttttgttgtg
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7180  98 -     13885 CTTC---------------------CG-TTCTT-GATCTAATGGCTCCTTTAAGTTTTCATTTCATGGCCA-------------GATATTTGAGTAACATTTT-CAT-------CTTTCCTTC-GGCATTG-----ATTTTTGTTTTG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15868  98 +     17162 cttc---------------------cg-ttttt-gatctgatggctcctttcagttttcatttcatggcca-------------gatatttgagtaacatttt-cat-------ctttccttc-ggcattg-----atttttgttgtg
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450823  98 + 189096842 CTTC---------------------TG-TTTTT-GATCTGATGGCTCCTTTCAGTTTTCATTTCATGGCCA-------------GATATTTGAGTAACATTTT-TAT-------CTTTCCTTC-GGCATTG-----ATTTTTGTTGTG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17116  98 -     18408 cttc---------------------cg-ttttt-gatctgatggctcctttcagttttcatttcatggcca-------------gatatttgagtaacatttt-cat-------ctttccttc-ggcattg-----atttttgttgtg
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267745  85 +    496798 -tta---------------------ta-tcttt-attgtg-----ttttttaaagtctcttttcAT-----------------------CCAGGTACTTCTTT-CATGTTCACCCTCATTtct-atgattatgatta---tt------
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cebuella_niveiventris.k141_592277                           2402  98 -     12580 cttc---------------------cg-ttTTT-GATCTGATGGCTCCTTTCAGTTTTCATTTCATGGCCA-------------GATATTTGAGTAACATTAT-CAT-------CTTTCCTTC-GGCATTG-----ATTTTTGTTGTG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40288  98 +     53515 cttc---------------------cg-ttttt-gatctgatggctcctttcagttttcatttcatggcca-------------gatatttgagtaacatttt-cat-------ctttccttc-ggcattg-----atttttgttgtg
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368501  97 -  26074798 cttc---------------------cg-ttttt-gatctgatggcttctttaagttttcatttcatggcca-------------aatatttgagtcacatttt-cat-------cttgcttt--ggcattg-----atttttgttgtg
i Cebus_albifrons.Contig27                               C 0 I 7
s Cebus_olivaceus.k141_1404781                                5390  97 -     34880 cttc---------------------cg-ttttt-gatctgatggcttctttaagttttcatttcatggcca-------------aatatttgagtcacatttt-cat-------cttgcttt--ggcattg-----atttttgttgtg
i Cebus_olivaceus.k141_1404781                           C 0 I 7
s Cebus_unicolor.k141_1654760                                64485  97 -     89041 cttc---------------------cg-ttttt-gatctgatggcttctttaagttttcatttcatggcca-------------aatatttgagtcacatttt-cat-------cttgcttt--ggcattg-----atttttgttgtg
i Cebus_unicolor.k141_1654760                            C 0 I 7
s Cephalopachus_bancanus.k141_72622                            914  88 -      1636 -TTA---------------------TG-TCTTT-ATTGTG-----TTTTTTAAAGTCTCTTTTCAT-----------------------CTAGGTACTTCTTT-CATGTTCACCCTCATTTCT-AGGATTATGACTAttttt------
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138037  98 -   4669795 CTTC---------------------CA-CTTTT-GATCTGATAGCTCCATTGAGTTTTCATTTCATGGCGA-------------AATATTTGGGTaacatttt-cat-------cttgatttt-ggcATTG-----ATTTTTGTTGTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41777  98 +     47900 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcga-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41610  98 -     44860 cttc---------------------ca-ctttg-gatctgatagctccattgagttttcatttcatggcga-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41593  98 -    148725 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcga-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24656  98 -     40656 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcattgcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----attttcgttgtg
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4592  98 +     20796 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcattgcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----attttcgttgtg
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8848  98 -     17524 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcattgcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24536  98 -     34525 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcattgcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9246  98 -     25376 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcattgcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361812  98 -  39242232 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcattgcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267556  98 +  21565898 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcattgcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29014  98 -     45857 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24801  98 -     32606 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcattgcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                          987  98 +      8499 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcattgcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22506  98 +     70610 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19365  98 +     36323 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcattgcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             27985  98 -     33796 attc---------------------ca-tttta-gatgtgacaacttcattaagttttcatttcatgggaa-------------aatatttggatacattttt-cat-------cttgtcttt-ggcagtg-----atttttgttgta
i Cheirogaleus_major.k141_666340                         C 0 I 3
s Cheirogaleus_medius.k141_759766                             2172  98 -     15404 attc---------------------tg-ttttg-gatgtgacaacttcattaagttttcatttcatgggaa-------------aatatttgggtaaattttt-cat-------tttgtcttt-ggtaatg-----atttttgttgta
i Cheirogaleus_medius.k141_759766                        C 0 I 3
s Cheracebus_lucifer.k141_2312002                             6388  97 -     32913 cttc---------------------ca-ttttt-gatctgacggctccattaagttttcatttcatggccc-------------aatatttgagtaaca-ttt-cat-------ctggctttt-ggccttg-----atttttgttgtg
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16801  97 -     40346 cttc---------------------ca-ttttt-gatctgacggctccattaagttttcatttcatggccc-------------aatatttgagtaaca-ttt-cat-------ctggctttt-ggccttg-----atttttgttgtg
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17065  97 +    216457 cttc---------------------ca-ttttt-gatctgacggctccattaagttttcatttcatggccc-------------aatatttgagtaaca-ttt-cat-------ctggctttt-ggccttg-----atttttgttgtg
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16849  97 +     39636 cttc---------------------ca-ttttt-gatctgacggctccattaagttttcatttcatggccc-------------aatatttgagtaaca-ttt-cat-------ctggctttt-ggccttg-----atttttgttgtg
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1235  90 +      5346 ct-c---------------------cg-tcttt-gatctgatggctcctttacgttttcatttcatggcca-------------gatatttgagtaaca-ttttcat-------ctttctttc-cgcattg-----gtttt-------
i Chiropotes_albinasus.k141_1946120                      C 0 I 11
s Chiropotes_israelita.k141_313004                           39930  90 -    112038 cttc---------------------cg-ttTTT-GACGTGATGGCTCCACGGAGTTTTCCTTTCACGGCCC-------------AGTGTTTGAGTAGCA-TTC-CGT-------CTCGCTTTT-GGCTTGG-----ATTTT-------
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5502  90 +     34062 cttc---------------------cg-ttTTT-GACGTGATGGCTCCACGGAGTTTTCCTTTCACGGCCC-------------AGTGTTTGAGTAGCA-TTC-CGT-------CTCGCTTTT-GGCTTGG-----ATTTT-------
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340262  98 +  18827391 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6873  98 -     44032 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301587  98 - 135778131 CTTC---------------------CA-CTTTT-GATCTGATAGCTCcattaagttttcatttcatgGCAA-------------AATATTTGGGTaacatttt-cat-------cttgatttt-ggCATTG-----ATTTTTGTTGTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406144  98 -   2368649 CTTC---------------------CA-CTTTT-GATCTGATAGCTCCattaagttttcatttcatgGCAA-------------AATATTTGGGTaacatttt-cat-------cttgatttt-ggCATTG-----ATTTTTGTTGTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375307  98 - 200372422 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              6031  98 -      6605 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Daubentonia_madagascariensis.ctg71                        289995  98 +  12879189 cttc---------------------ca-ttttt-gatgtgacagcttcattaagttttcatttcatggcaa-------------aatatttcggtaaattttt-cat-------ctcatcttt-ggcaatg-----atttttgttgta
i Daubentonia_madagascariensis.ctg71                     C 0 I 3
s Erythrocebus_patas.Contig38                               259818  98 +  21539334 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galago_moholi.ctg3793                                     120792  97 -    137831 cttc---------------------aa-ttttt-gataggaccacttcattaagtttt-------------catttcatggcaaaatatttggGTAAG-tttc-ttt-------ttatttttt-gagacag-----agtctcattttg
i Galago_moholi.ctg3793                                  C 0 I 266
s Galago_senegalensis.k141_991736                             4333  97 +     22493 cttc---------------------aa-ttttt-gataggaccacttcattaagtttt-------------catttcatggcaaaatatttggGTAAG-tttc-ttt-------ttatttttt-gagacag-----agtctcattttg
i Galago_senegalensis.k141_991736                        C 0 I 266
s Galeopterus_variegatus.GalVar_scaffold_74466               16405  97 +     18121 cttt---------------------ca-ttttt-gatgtggtagcattattaagtttttatttcatggtac-------------aatatttgggtaaaatttt-cac-------cttgcttt--gtcaatg-----atttttgttgta
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               1953  98 -      8343 cttc---------------------ca-ttttt-gatctgacagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251443  98 - 186649187 cttc---------------------ca-ttttt-gatctgacagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Gorilla_gorilla.LT578341.1                             I 53 C 0
s Hoolock_leuconedys.ctg274                                    139690 118 -    630532 cttatatttctgcttcatggtcttcca-ttttt-tatctg-tagctacaataagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Hoolock_leuconedys.ctg274                                 I 60 C 0
s Hylobates_agilis.k141_1155965                               2351 119 +     12352 cttatatttctgcttcatggtcttccatttttt-tatctg-tagctacaataagttttcatttcatggcaa-------------aatacttgggtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Hylobates_agilis.k141_1155965                          I 33 C 0
s Hylobates_klossii.k141_738755                               9534 119 +     55766 cttatatttctgcttcatggtcttcca-tttttttatctg-tagctacaataagttttcatttcatggcaa-------------aatacttgggtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Hylobates_klossii.k141_738755                          I 33 C 0
s Hylobates_pileatus_b.LG02                                       2048874 118 + 191637585 cttatatttcttcttcatggtcttcca-ttttt-tatctg-tagctacaataagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Hylobates_pileatus_b.LG02                                     I 33 C 0
s Hylobates_pileatus_a.tarseq_633                            7798206 118 +  11177569 cttatatttcttcttcatggtcttcca-ttttt-tatctg-tagctacaataagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Hylobates_pileatus_a.tarseq_633                          I 33 C 0
s Indri_indri.k141_4600452                                    1050  98 -      1527 cttc---------------------tg-ttttt-gatgtgacaacttcattaaattttgatttcatggcaa-------------aatatttgggtaaattttt-cat-------cttgtcttt-ggcaatg-----gtttttgttgta
i Indri_indri.k141_4600452                               C 0 I 42
s Lagothrix_lagothricha.k141_246028                          40639  97 +    110728 ctt----------------------cg-ttttt-gatctgatggctccattaagttttcatttcatggcca-------------aatatttgagtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1320  98 -     13097 CTTC---------------------CG-TTTTT-GATCTTATGGCTCCTTTACGTTTTCATTTCATGGCCA-------------GATATTTGGGTAACATTTT-CAT-------CTTTCTTTC-CGCATTG-----GTTTTTGTTGTG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1271  98 +      5940 CTTC---------------------CG-TTTTT-GATCTGATGGCTCCTTTACGTTTTCATTTCATGGCCA-------------GATATTTGGGTAACATTTT-CAT-------CTTTCTTTC-CGCATTG-----GTTTTTGTTGTG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                         902  98 -      5717 cttc---------------------cg-ttTTT-GATCTGATGGCTCCTTTACGTTTTCATTTCATGGCCA-------------GATATTTGGGTAACATTTT-CAT-------CTTTCTTTC-CGCATTG-----GTTTTTGTTGTG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7537  98 -     11567 cttc---------------------tg-ttTTT-GATCTGACAGCTCCTTTAAGTTTTCATTTCATGGCCA-------------GATATTTGAGTAACATTTT-CAT-------CTTTCTTTA-GGCATTG-----ATTTTTGCTGTG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          8918  98 -     12945 cttc---------------------tg-ttTTT-GATCTGACAGCTCCTTTAAGTTTTCATTTCATGGCCA-------------GATATTTGAGTAACATTTT-CAT-------CTTTCTTTA-GGCATTG-----ATTTTTGCTGTG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6344  98 +     29618 cttc---------------------cg-ttttt-gatgtgacaacttccttaagttttcatttcatggcaa-------------aatatttgggtaaattttt-cat-------cttgtcttt-ggcaatg-----atttttattgta
i Lepilemur_ankaranensis.k141_567626                     C 0 I 3
s Lepilemur_dorsalis.k141_387009                              6341  98 +     31569 cttc---------------------cg-ttttt-gatgtgacaacttccttaagttttcatttcatggcaa-------------aatatttgggtaaattttt-cat-------cttgtcttt-ggcaatg-----atttttattgta
i Lepilemur_dorsalis.k141_387009                         C 0 I 3
s Lepilemur_ruficaudatus.k141_330196                          6352  98 +     24756 cttc---------------------cg-ttttt-gatgtgacaacttccttaagttttcatttcatggcac-------------aatatttgggtaaactttt-cat-------cttgtcttt-agcaatg-----atttttattgta
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 3
s Lepilemur_septentrionalis.k141_360456                       6345  98 +     16388 cttc---------------------cg-ttttt-gatgtgacaacttccttaagttttcatttcatggcaa-------------aatatttgggtaaattttt-cat-------cttgtcttt-ggcaatg-----atttttattgta
i Lepilemur_septentrionalis.k141_360456                  C 0 I 3
s Lophocebus_aterrimus.ctg367                               329990  98 -   1826925 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            6781  84 +     19643 ctta---------------------aa-ttttt-gataggaccacttcattaagtttt--------------------------aatatttgggtaaa-tttc-ttt-------ttatttttt-gagacag-----agtctcattttg
i Loris_lydekkerianus.k141_2031736                       C 0 I 615
s Loris_tardigradus.ctg83                                  5040440  84 -   6120653 ctta---------------------aa-ttttt-gataggaccacttcattaagtttt--------------------------aatatttgggtaaa-tttc-ttt-------ttatttttt-gagacag-----agtctcattttg
i Loris_tardigradus.ctg83                                C 0 I 616
s Macaca_arctoides.k141_1757516                              42275  98 -     61512 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 369903  98 -  60120075 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22223  98 +     30207 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19326  98 -     24934 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22109  98 +     30527 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33299  98 -     50087 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43037  98 +     51645 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411611  98 - 187317192 CTTC---------------------CA-CTTTT-GATCTGATAGCTCCATTGAGTTTTCATTTCATGGCAA-------------AATATTTGGGTaacatttt-cat-------cttgatttt-ggCATTG-----ATTTTTGTTGTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396494  98 +  25927173 CTTC---------------------CA-CTTTT-GATCTGATAGCTCCATTGAGTTTTCATTTCATGGCAA-------------AATATTTGGGTaacatttt-cat-------cttgatttt-ggCATTG-----ATTTTTGTTGTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45625  98 -     62418 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22313  98 +     24253 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42068  98 +     59329 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  267902  98 +    668171 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19248  98 +     21031 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               32981  98 +     33478 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319378  98 +  24302211 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354210  98 -    752769 cttc---------------------ca-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_582562                                 7279  98 +     17804 cttc---------------------cg-ttttt-gatctgatggctcctttcagttttcatttcatggcca-------------gatatttgagtaacatttt-cat-------ctttccttt-ggcattg-----atttttgttgtg
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8063  98 -     12984 cttc---------------------cg-ttttt-gatctgatggttcctttcagttttcatttcatggcca-------------gatatttgagtaacatttt-cat-------ctttccttc-ggcattg-----atttttgttgtg
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16014  98 -     26561 cttc---------------------cg-ttttt-gatctgatggctcctttcagttttcatttcatggcca-------------gatatttgagtaacatttt-cat-------ctttccttc-ggcattg-----atttttgttgtg
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74981953  98 +  93316391 ATTC---------------------CG-TTTTT-GATGTGACAACTTcattaagttttcatttcatgGGAA-------------AATATCTGGATAAATTTTT-CAT-------CTTGTCTTT-GGCAATG-----ATGTTTGTTGTA
i Microcebus_murinus.CM007674.1                          C 0 I 3
s Miopithecus_ogouensis.k141_1534655                         19370  98 -     27822 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     49811  98 -     62432 attc---------------------cg-ttttt-gatgtgacaacttcattaagttttaatttcatgggaa-------------aatttctggataaatcttt-cat-------cttgtcttt-ggcaatg-----atttttgttgca
i Mirza_zaza.k141_766280                                 C 0 I 3
s Nasalis_larvatus.k141_1350636                              25984  98 +     34575 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           50634  97 -    132029 cttc---------------------ca-ttttt-tatctg-tagctacaataagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6729  97 -     16345 cttc---------------------ca-ttttt-tatctg-tagctacaataagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgctgtt-ggcattg-----atttttgttgtg
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12614  97 +     22201 cttc---------------------ca-ttttt-tatctg-tagctacaataagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8410949  97 -  22158432 cttc---------------------ca-ttttt-tatctg-tagctacaataagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23012  97 -     54323 cttc---------------------ca-ttttt-tatctg-tagctacaataagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93632065  84 + 196305487 cttc---------------------aa-ttttt-gataggaccacttcattacgtttt--------------------------aatatttgggtaaa-tttc-ttt-------ttatttttt-gagatag-----agtctcattttg
i Nycticebus_bengalensis.LG01                            C 0 I 290
s Nycticebus_coucang.k141_8166032                             1454  84 +      2758 cttc---------------------aa-ttttt-gataggaccacttcattacgtttt--------------------------aatatttgggtaaa-tttc-ttt-------ttatttttt-gagatag-----agtctcattttg
i Nycticebus_coucang.k141_8166032                        C 0 I 290
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560319  84 - 199412804 cttc---------------------aa-ttttt-gataggaccacttcattacgtttt--------------------------aatatttgggtaaa-tttc-ttt-------ttatttttt-gagacag-----agtctcattttg
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 290
s Otolemur_crassicaudatus.k141_649260                        35926  97 -     51505 cttc---------------------aa-ttttt-gataggaccacttcgttaagtttt-------------catttcatggcaaaatatttggGTAAA-tttc-ttt-------ttatttttt-gagacag-----agtctcattttg
i Otolemur_crassicaudatus.k141_649260                    C 0 I 257
s Otolemur_garnettii.GL873799.1                             348942  97 +   1103335 CTTC---------------------AA-TTTTT-GATAGGACCACTtcattaagtttt-------------catttcatgGCAAAATATTTgggtaaa-tttc-ttt-------ttatttttt-gagacag-----agtctcattttg
i Otolemur_garnettii.GL873799.1                          C 0 I 255
s Pan_troglodytes.CM009242.2                               1468832  98 - 189151597 CTTC---------------------CA-TTTTT-GATCTGACAGCTCCATTAAGTTTTCATTTCATGGCAA-------------AATATTTGGGTAACATTTT-CAT-------CTTGCTTTT-GGCATTG-----ATTTTTGTTGTG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   240218  98 - 183742232 CTTC---------------------CG-CTTTT-GATCTGATAGCTCCATTGAGTTTTCATTTCATGGCAA-------------AATATTTGGGTaacatttt-cat-------cttgatttt-ggCATTG-----ATTTTTGTTGTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6682  98 +     21308 cttc---------------------cg-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287721  98 -  20919399 cttc---------------------cg-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19337  98 -     27687 cttc---------------------cg-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12473  98 +     16796 cttc---------------------cg-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19283  98 -     23640 cttc---------------------cg-ctttt-gatctgatagctccattgagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----atttttgttgtg
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22175  95 +     31479 cttc---------------------aa-ttttt-gataggaccacttcattaagttttcatttcatggcaa-------------aatatttggataaa-tttc-ttt-------ttatttttt-aaaacag-------tctcattttg
i Perodicticus_ibeanus.k141_1921260                      C 0 I 600
s Perodicticus_potto.k141_1854441                            14545  95 -     24908 cttc---------------------aa-ttttt-gataggaccacttcattaagttttcatttcatggcaa-------------aatatttggataaa-tttc-ttt-------ttatttttt-aaaacag-------tctcattttg
i Perodicticus_potto.k141_1854441                        C 0 I 269
s Piliocolobus_badius.k141_2495623                            6136  98 +      7560 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatgtt-ggcattg-----gtttttgttgtg
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61844  98 -     63152 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatgtt-ggcattg-----gtttttgttgtg
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44443  98 +     45295 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatgtt-ggcattg-----gtttttgttgtg
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2121  98 +      5735 CTTC---------------------CA-CTTTT-GATCTGATAGCTCcattaagttttcatttcatgGCAA-------------AATATTTGGGTAACATTTT-CAT-------CTTGATGTT-GGCATTG-----GTTTTTGTTGTG
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62280  90 +    207309 cttc---------------------cg-ttTTT-GACCTGATGGCTCCACGGAGTTTTCCTTTCACGGCCC-------------AGTGTTTGAGTAACA-TTT-CAT-------CTCGCTTTT-GGCATGG-----ATTTT-------
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3400  90 -     25401 cttc---------------------cg-ttttt-gacctgatgactccacggagttttcctttcatggccc-------------agtgtttgagtaaca-ttt-cat-------ctcgctttt-ggcatgg-----atttt-------
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29115  90 +     58159 cttc---------------------cg-ttttt-gacctgatggctccacggagttttcctttcacggccc-------------agtgtttgagtaaca-ttt-cat-------ctcgctttt-ggcatgg-----atttt-------
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29391  90 +     63561 cttc---------------------cg-ttTTT-GACCTGATGGCTCCACGGAGTTTTCCTTTCACGGCCC-------------AGTGTTTGAGTAACA-TTT-CAT-------CTCGCTTTT-GGCATGG-----ATTTT-------
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29154  90 +     51148 cttc---------------------cg-ttttt-gacctgatggctccacggagttttcctttcacggccc-------------agtgtttgagtaaca-ttt-cat-------ctcgctttt-ggcatgg-----atttt-------
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554147  90 -   4542175 CTTC---------------------CG-TTTTT-GACCTGATGGCTCCACGGAGTTTTCGTTTCACGGCCC-------------AGTGTTTGAGTAACA-TTT-CAT-------CTCGCTTTT-GGCATGG-----ATTTT-------
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29138  90 +     51125 cttc---------------------cg-ttttt-gacctgatggctccacggagttttcctttcacggccc-------------agtgtttgagtaaca-ttt-cat-------ctcgctttt-ggcatgg-----atttt-------
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5562  97 +     39866 cttc---------------------ca-ttttt-gatctgacggctccgtgaagttttcatttcatggccc-------------aatatttgagtaaca-ttt-cat-------ctggctttt-ggcattg-----atttttgttgcg
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           649  96 -      9282 cttc---------------------ca-ttttt-gatctgacgtctccgtgtagttttcatttcatggccc-------------aatatttgagtaaca-ttt-cat-------ctggcttt--agcattg-----atttttgttgtt
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40050  96 -     87950 cttc---------------------ca-ttttt-gatctgacgtctccgtgtagttttcatttcatggccc-------------aatatttgagtaaca-ttt-cat-------ctggcttt--agcattg-----atttttgttgtt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40443  96 -     88961 cttc---------------------ca-ttttt-gatctgacgtctccgtgtagttttcatttcatggccc-------------aatatttgagtaaca-ttt-cat-------ctggc-ttt-agcattg-----atttttgttgtt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5142  96 -     39403 cttc---------------------ca-ttttt-gatctgacgtctccgtgtagttttcatttcatggccc-------------aatatttgagtaaca-ttt-cat-------ctggcttt--agcattg-----atttttgttgtt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40096  96 +     87928 cttc---------------------ca-ttttt-gatctgacggctccgtgtagttttcatttcatggccc-------------aatatttgagtaaca-ttt-cat-------ctggcttt--agcattg-----atttttgttgtt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5140  97 -     60166 cttc---------------------ca-ttttt-gatctgacggctccgtgaagttttcatttcatggccc-------------aatatttgagtaaca-ttt-cat-------ctggctttt-ggcattg-----atttttgttgtg
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12076  97 -     67232 cttc---------------------ca-ttttt-gatctgacggctccgcgaagttttcatttcatggccc-------------aatatttgagtaaca-ttt-cat-------ctggctttt-ggcattg-----atttttgttgtg
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          39992  97 -     90634 CTTC---------------------CA-TTTTT-GATCTGACGGCTCCGTGAAGTTTTCATTTCATGGCCC-------------AATATTTGAGTAACA-TTT-CTT-------CTGGCTTTT-GGCATTG-----ATTTTTGTTGTG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41460  97 +     89403 cttc---------------------ca-ttttt-gatctgacggctccgtgaagttttcatttcatggccc-------------aatatttgagtaaca-ttt-cat-------ctggctttt-ggcattg-----atttttgttgtg
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174459  98 - 189387572 CTTC---------------------CA-CTTTT-GATCTGACAGCTCCATTAAGTTTTCATTTCATGGCAA-------------AATATTTGGGTAACATTTT-CAT-------CTTGCTTTT-GGCATTG-----ATTTTTGTTGTG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189457  98 -   9816681 cttc---------------------ca-ctttt-gatctgacagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24618  98 +     69807 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41813  98 -     80239 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatgtt-ggcattg-----gttttttttgtg
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563434  98 -   2598838 CTTC---------------------TG-TTTTT-GATGTGACAACTTCATTAAATTTTGATTTCATGGCAA-------------AATATTTGGGTAAATTTTT-CAT-------CTTGTcttt-ggcaatg-----atttttgtTGTA
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 3
s Propithecus_coronatus.k141_209299                           1071  97 -      7103 -ctc---------------------tg-ttttt-gatgtgacaacttcattaaattttgatttcatggcaa-------------aatatttgggtaaattttt-cat-------cttgtcttt-ggcaatg-----atttttgttgta
i Propithecus_coronatus.k141_209299                      C 0 I 3
s Propithecus_diadema.k141_153680                             1667  98 -     11706 cttc---------------------tg-ttttt-gatgtgacaacttcattaaattttgatttcatggcaa-------------aatatttgggtaaattttt-cat-------cttgtcttt-ggcaatg-----atttttgttgta
i Propithecus_diadema.k141_153680                        C 0 I 3
s Propithecus_edwardsi.k141_635656                            5402  98 -     30655 cttc---------------------tg-ttttt-gatgtgacaacttcattaaattttgatttcatggcaa-------------aatatttgggtaaattttt-cat-------cttgtcttt-ggcaatg-----atttttgttgta
i Propithecus_edwardsi.k141_635656                       C 0 I 3
s Propithecus_perrieri.k141_1496898                          31728  98 +     46564 cttc---------------------tg-ttttt-gatgtgacaacttcattaaattttgatttcatggcaa-------------aatatttgggtaaattttt-cat-------cttgtcttt-ggcaatg-----atttttgttgta
i Propithecus_perrieri.k141_1496898                      C 0 I 3
s Propithecus_tattersalli.k141_1127767                       91999  98 -     98465 cttc---------------------tg-ttttt-gatgtgacaacttcattaaattttgatttcatggcaa-------------aatatttgggtaaattttt-cat-------cttgtcttt-ggcaatg-----atttttgttgta
i Propithecus_tattersalli.k141_1127767                   C 0 I 3
s Propithecus_verreauxi.k141_1047036                          5635  98 +     35169 cttc---------------------tg-ttttt-gatgtgacaacttcattaaattttgatttcatggcaa-------------aatatttgggtaaattttt-cat-------cttgtcttt-ggcaatg-----atttttgttgta
i Propithecus_verreauxi.k141_1047036                     C 0 I 3
s Pygathrix_cinerea.k141_1153803                             24009  98 +     91421 cttc---------------------ca-ctttt-gatttgatagctccataaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cgt-------cttgatttt-ggcattg-----gtttttgttgtg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150502  98 -   7812017 cttc---------------------ca-ctttt-gatttgatagctccataaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cgt-------cttgatttt-ggcattg-----gtttttgttgtg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4879  98 +     72585 cttc---------------------ca-ctttt-gatttgatagctccataaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cgt-------cttgatttt-ggcattg-----gtttttgttgtg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_221883                            25839  98 +     27361 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cgt-------cttgatttt-ggcattg-----gtttttgttgtg
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119187  98 + 195417433 cttc---------------------ca-ctttt-gatctgataGCTCcattaagttttcatttcatgGCAA-------------AATATTTGGGTAACATTTT-CGT-------CTTGATTTT-GGCATTG-----GTTTTTGTTGTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233447  98 -   7961872 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cgt-------cttgatttt-ggcattg-----gtttttgttgtg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               1233  97 +     27962 ct-c---------------------cg-tcttt-gatctgatggctcctttacgttttcatttcatggcca-------------gatatttgagtaacatttt-cat-------ctttctttc-cgcattg-----gtttttgttgtg
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1243  97 +      6077 CT-C---------------------CG-TTTTT-GATCTGATGGCTCCTTTACGTTTTCATTTCATGGCCA-------------GATATTTGAGTAACATTTT-CAT-------CTTTCTTTC-CGCATTG-----GTTTTTGTTGTG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1261  97 +      5971 CT-C---------------------CG-TTTTT-GATCTGATGGCTCCTTTACGTTTTCATTTCATGGCCA-------------GATATTTGAGTAACGTTTT-CAT-------CTTTCTTTC-CGCATTG-----GTTTTTGTTGTG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1316  97 +      5932 CT-C---------------------CG-TTTTT-GATCTGATGGCTCCTTTACGTTTTCATTTCACGGCCA-------------GATATTTGAGTAACGTTTT-CAT-------CTTTCTTCC-CGCATTG-----GTTTTTGTTGTG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1462  97 -      2099 ct-c---------------------cg-ttttt-gatctgatgcctcctttacgttttcatttcatggcca-------------gatatttgagtaacatttt-cat-------ctttctttc-cgcattg-----gtttttgttgtg
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388581  97 - 209938924 ct-c---------------------cg-ttttt-gatctgatggctcctttacgttttcatttcatggcca-------------gatatttgagtaacttttt-cat-------ctttctttc-cgcattg-----gtttttgttgtg
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1263  97 +      5979 ct-c---------------------cg-ttttt-gatctgatggctcctttacgttttcatttcatggcca-------------gatatttgagtaacatttt-cat-------ctttctttc-cgcattg-----gtttttgttgtg
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1642  97 -      4301 CT-C---------------------CG-TTTTT-GATCTGATGGCTCCTTTACGTTTTCATTTCATGGCCA-------------GATATTTGAGTAACATTTT-CAT-------CTTTCTTTC-CGCATTG-----GTTTTTGTTGTG
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235724  98 +   5703754 cttc---------------------cg-ttttt-gatctgatggcttctttaagttttcatttcatggcca-------------aatttttgagtcacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Sapajus_apella.ctg103                                  C 0 I 7
s Sapajus_macrocephalus.k141_796559                           5314  98 +     21866 cttc---------------------cg-ttttt-gatctgatggcttctttaagttttcatttcatggcca-------------aatttttgagtcacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Sapajus_macrocephalus.k141_796559                      C 0 I 7
s Semnopithecus_entellus.k141_158471                         22326  98 +     27374 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25845  98 +     58920 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12341  98 -     45317 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gcttttgttgtg
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            19999  98 -     42441 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgta
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22679  98 -     29113 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25748  98 -     48123 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       387921  97 +   1523678 cttc---------------------ca-ttttt-tatctg-tagctacaataagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgctttt-ggcattg-----atttttgttgtg
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                4437  85 +      6850 -TTA---------------------TA-TTTTT-ATTGTG-----TTTTTTAAAGTCTCTTTTCAT-----------------------CTAGGTACTTCTTT-CACGTTCACCCTCATGTCT-ATGATTA---TTTGTTTT------
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4476  85 +     20590 -TTA---------------------TA-TTTTT-ATTGTG-----TTTTTTAAAGTCTCTTTTCAT-----------------------CTAGGTACTTCTTT-CACGTTCACCCTCATGTCT-ATGATTA---TTTGTTTT------
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350204  98 - 186847797 CTTC---------------------CA-CTTTT-GATCTGATAGCTCCATTGAGTTTTCATTTCATGGCAA-------------AATATTTGGGTaacatttt-cat-------cttgatttt-ggCATTG-----ATTTTTGTTGTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        17890  98 +     26378 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30574  98 -     78344 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17211  98 +     25722 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25436  98 -     62838 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25553  98 +     46913 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6361  98 -     28527 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27375  98 -     64340 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25412  98 -     63452 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6855  98 +     22490 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          285  98 -      6147 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7277  98 -     13050 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtgtttgttgtg
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252516  98 -   6242583 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58247  98 +     59866 cttc---------------------ca-ctttt-gatctgatagctccattaagttttcatttcatggcaa-------------aatatttgggtaacatttt-cat-------cttgatttt-ggcattg-----gtttttgttgtg
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830738  98 -   4065304 cttc---------------------ta-ttttt-gatgtgatagcttcattaaaattttatttcatggcaa-------------aatacttgggtaaaatttt-ttc-------cttgtctttggt-agtg-----atttttattgtg
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5268  97 -     70247 cttc---------------------ta-ttttt-gatgtgatagcttcattaaaattttatttcatggcaa-------------aatacttgggtaaattttT-TTC-------CTTGTCTTT-GT-AGTG-----ATTTTTGTTGCT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  22498  98 -     30710 cttc---------------------cg-ttttt-gatgtgacaacttcattaagttttcatttcatggcaa-------------aatatttgagtaaattttt-cat-------cttgtcttt-ggcaatg-----atttctgttgta
i Varecia_rubra.k141_787544                              C 0 I 3
s Varecia_variegata.k141_289850                              21405  98 -    147434 cttc---------------------cg-ttttt-gatgtgacaacttcattaagtttccatttcatggcaa-------------aatatttgagtaaattttt-cat-------cttgtcttt-ggcaatg-----atttctgttgta
i Varecia_variegata.k141_289850                          C 0 I 3
e Microgale_talazaci.MicTal_scaffold_6613                    41190   0 +    145209 C
e Echinops_telfairi.JH980293.1                            62850875   0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_171931              10580   0 -     14239 C
e Elephantulus_edwardii.JH947257.1                         9105070   0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862241  96 -  20541912 I
e Galagoides_demidoff.k141_561628                            17659 17509 +     32986 T
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17402  24 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107724  24 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10395  25 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     11737 1857 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2569  95 +      5315 I
e Zalophus_californianus.ZalCal_flattened_line_17732         25894   0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102244   0 -    112863 C
e Ursus_maritimus.KK499267.1                                178621   0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              3731   0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          1726   0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        36520   0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1448673   0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195481   0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11465886   0 -  31847680 C
e Mustela_putorius.JH418006.1                             14351939   0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5500   0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23004   0 -     74585 C
e Lycaon_pictus.CM007581.1                                41611863   0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810491   0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913135   0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104278   0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41612708   0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          219583   0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6222   0 -     23171 C
e CanFam4.chr16                                           42502592   0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2497  96 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412096   0 +  29979442 C
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090   0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104549   0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011   0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081   0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    477245  96 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    102334   0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      188379   0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 285  24 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11221 104 +     22964 I
e Sus_scrofa.CM000828.4                                    6639884   0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             121761   0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1855993   0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113317   0 +    313613 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468   0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72407  95 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2911041 105 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815   0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096091   0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3534959 101 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838398  95 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49427  96 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511   0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214   0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130   0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12123   0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318   0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969265   0 +   8748460 C
e Panthera_pardus.KV860321.1                              18458540   0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21214   0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394   0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875   0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107098986 1497 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272   0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886   0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894   0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125012  93 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002   0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117167  24 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   15355   0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907   0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176361  96 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833   0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182184  96 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944   0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791   5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       147948 106 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Manis_pentadactyla.KN006162.1                             218000   0 +    317179 C
e Manis_javanica.JSZB01003497.1                             670709   0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220768  95 -    270270 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400   0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355   0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366   0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877   0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66057   0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47009 105 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547693 105 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354   0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755   0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                27601   0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707   0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707   0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834   0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965   0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564   0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002   0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 24624   0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113276   0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              56878   0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477   0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754   0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027   0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834   0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204   0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879   0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306   0 +    112731 C
e Eulemur_collaris.k141_601111                               40347   0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635   0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857   0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641   0 -    133382 C
e Equus_przewalskii.KK951119.1                              409331   0 -    498745 C
e Equus_caballus.CM000403.2                               21372545   0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3038611   0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323   0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3804  93 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  136422   0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  661629   0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090   0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1063   0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278   5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           248 100 -      8242 I
e Condylura_cristata.JH655891.1                           35804580   0 +  53390261 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16178   0 +     27315 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421   0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921   0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648   0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698   0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038   0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752   0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583   0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559   0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420   0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852   0 +  48749331 C
e Bison_bison.KN261452.1                                     20465   0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932   0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970   0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762   0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036   0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174210  98 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937   0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962   9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           809829   0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       1689 40 +     36723 TGATCT-TTCT---CCA--TTG--ATAA--GTTT-GC-A---TTT--TT--CC---C-CATA-G
s Allenopithecus_nigroviridis.k141_3755588                   44973 40 +     53615 tgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-atag-t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40795 40 +     44087 cgatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13501 40 -     21945 cgatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15177 40 +     32033 cgatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69684 40 -     84148 cactct-ttct---ctg--ttg--ataa--gttt-gc-t---ttt--ct--ct---c-cata-g
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41913 40 -     78289 cactct-ttct---ctg--ttg--ataa--gttt-gc-t---ttt--ct--ct---c-cata-g
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41363 40 +     55831 cactct-tcct---ctg--ttg--ataa--gttt-gc-t---ttt--ct--ct---c-cata-g
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39801 40 -     64179 cactct-ttct---ctg--ttg--ataa--gttt-gc-t---ttt--ct--ct---c-cata-g
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21447 40 -     24835 cactct-ttct---ctg--ttg--ataa--gttt-gc-t---ttt--ct--ct---c-cata-g
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38430 40 +     45454 cactct-ttct---ctg--ttg--ataa--gttt-gc-t---ttt--ct--ct---c-cata-g
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44129 40 +     70886 cactct-ttct---ctg--ttg--ataa--gttt-gc-t---ttt--ct--ct---c-cata-g
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6253 40 +     30854 cactct-ttct---ctg--ttg--ataa--gttt-gc-t---ttt--ct--ct---c-cata-g
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30392 40 +     42133 cactct-ttct---ctg--ttg--ataa--gttt-gc-t---ttt--ct--ct---c-cata-g
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   48210 40 -     65372 cactct-ttct---ctg--ttg--ataa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41957 40 +     43593 cactct-ttct---ctg--ttg--ataa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                669970 40 +   5030052 CACTCT-TTCT---CTG--TTG--GTAA--GTTT-GC-T---TTT--CT--CC---C-CATA-G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21612 40 -     23494 cactct-ttct---ctg--ttg--ataa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6748 40 +      8415 cactct-ttct---ctg--ttg--ataa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       17447 46 -     45910 ---TCT-TTCT---TCAGGTTGTCAtag--gggt-ac-a---tgtaatt--tggtta-cata-g
i Arctocebus_calabarensis.k141_1364444                   I 618 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272191 40 +  21539123 cactct-ttct---ctg--ttg--ataa--gttt-ga-t---ttt--ct--cc---c-cata-g
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8358 40 +     48076 cactct-ttct---ctg--ttg--ataa--gttt-ga-t---ttt--ct--ct---c-cata-g
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3495 40 -     28759 cactct-ttct---ctg--ttg--ataa--gttt-ga-t---ttt--ct--cc---c-cata-g
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31048 40 +     44353 cactct-ttct---ctg--ttg--ataa--gttt-ga-t---ttt--ct--cc---c-cata-g
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46419 40 -     71267 CACTCT-TTCT---CTG--TTG--ATAA--GTTT-GA-T---TTT--CT--CT---C-CATA-G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20478 40 -     33135 cactct-ttct---ctg--ttg--ataa--gttt-ga-t---ttt--ct--cc---c-cata-g
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3655 39 +     11645 ---tc--tcat---cta--ttg--ataa--gttt-tg-c---ttt--tt--cttttc-cgt-aa
i Avahi_laniger.k141_2756659                             I 3 C 0
s Avahi_peyrierasi.k141_1823318                               3656 39 -     19611 ---tc--tcat---cta--ttg--ataa--gttt-tg-c---ttt--tt--cttttc-cgt-aa
i Avahi_peyrierasi.k141_1823318                          I 3 C 0
s Cacajao_ayresi.k141_96119                                   5380 37 +     28062 ----CT-TGCT---CTG--TTG--GTAG--GTTTTGC-T---TTT--CT--CC---C-CACA-G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40674 37 -     91139 ----CT-TGCT---CTG--TTG--GTAG--GTTTTGC-T---TTT--CT--CC---C-CACA-G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18200 37 +     95584 ----CT-TGCT---CTG--TTG--GTAG--GTTTTGC-T---TTT--CT--CC---C-CACA-G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18113 37 +    119600 ----CT-TGCT---CTG--TTG--GTAG--GTTTTGC-T---TTT--CT--CC---C-CACA-G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7605 40 +     18648 cactct-ttct---ctg--ttg--ataa--gttt-gc-a---ttt--ct--cc---c-cata-g
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7278 40 -     13885 CACTCT-TTCT---CTG--TTG--ATAA--GTTT-GC-T---TTT--CT--CC---C-CATA-G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           15966 40 +     17162 cactct-ttct---ctg--ttg--ataa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450921 40 + 189096842 CACTCT-TTCT---CTG--TTG--ATAA--GTTT-GC-T---TTT--CT--CC---C-CATA-G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17214 40 -     18408 cactct-ttgt---ctg--ttg--ataa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267830 31 +    496798 ----------a---ttt--ttt--ttat--tttc-tg-g---ttt--tt--gc---c-AGCA-T
i Carlito_syrichta.NW_007259797.1                        C 0 I 10
s Cebuella_niveiventris.k141_592277                           2500 40 -     12580 CACTCT-TTCT---CTG--TTG--ATAA--GTTT-GC-A---TTT--CT--CC---C-CATA-G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40386 40 +     53515 cactct-ttct---ctg--ttg--ataa--gttt-gc-a---ttt--ct--cc---c-cata-g
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368605 22 -  26074798 --------------------------aa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Cebus_albifrons.Contig27                               I 7 C 0
s Cebus_olivaceus.k141_1404781                                5494 22 -     34880 --------------------------aa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Cebus_olivaceus.k141_1404781                           I 7 C 0
s Cebus_unicolor.k141_1654760                                64589 22 -     89041 --------------------------aa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Cebus_unicolor.k141_1654760                            I 7 C 0
s Cephalopachus_bancanus.k141_72622                           1002 31 -      1636 ----------t---ttt--ttt--ttat--tttc-tg-g---ttt--tt--GC---C-AGCA-T
i Cephalopachus_bancanus.k141_72622                      C 0 I 10
s Cercocebus_atys.KQ010504.1                                138135 38 -   4669795 CGATCT-TTCT---CCA--TTG--AT----GTTT-GC-T---TTT--TT--CC---C-GCAG-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41875 38 +     47900 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41708 38 -     44860 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-gcag-t
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41691 38 -    148725 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-gcag-t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24754 40 -     40656 cgatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4690 40 +     20796 cgatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8946 40 -     17524 cgatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24634 40 -     34525 cgatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Cercopithecus_hamlyni.k141_566925                      C 0 I 1
s Cercopithecus_lowei.k141_2101310                            9344 40 -     25376 cgatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361910 40 -  39242232 caatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267654 40 +  21565898 cgatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29112 40 -     45857 cgatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24899 40 -     32606 caatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1085 40 +      8499 cgatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22604 40 +     70610 cagtct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19463 40 +     36323 cgatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             28086 39 -     33796 ---tc-ttcat---cta--ttg--ataa--gttt-cg-c---ttt--tt--cttttc-tat--g
i Cheirogaleus_major.k141_666340                         I 3 I 1
s Cheirogaleus_medius.k141_759766                             2273 40 -     15404 ---tc-ttcat---cta--ttg--ataa--gttt-tgcc---ttt--tt--cttttc-ttt--g
i Cheirogaleus_medius.k141_759766                        I 3 I 1
s Cheracebus_lucifer.k141_2312002                             6485 40 -     32913 cactct-ttct---ctg--ttg--ctaa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16898 40 -     40346 cactct-ttct---ctg--ttg--ctaa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17162 40 +    216457 cactct-ttct---ctg--ttg--ctaa--gttt-ac-t---ttt--ct--cc---c-cata-g
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16946 40 +     39636 cactct-ttct---ctg--ttg--ctaa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1336 36 +      5346 ----ct-ttct---ctg--ctg--ataa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Chiropotes_albinasus.k141_1946120                      I 11 C 0
s Chiropotes_israelita.k141_313004                           40020 37 -    112038 ----CT-TGCT---CTG--TTG--GTAA--GTTTTGC-T---TTT--CT--CC---C-CACA-G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5592 37 +     34062 ----CT-TGCT---CTG--TTG--GTAA--GTTTTGC-T---TTT--CT--CC---C-CACA-G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340360 40 +  18827391 cgatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        6971 40 -     44032 cgatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301685 40 - 135778131 CGATCT-TTCT---CCA--TTG--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406242 38 -   2368649 CGATCT-TTCT---CTA--TTG--AT----GTTT-GC-T---TTT--TT--CC---C-ACAG-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375405 38 - 200372422 caatct-ttct---cta--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              6129 40 -      6605 cgatct-ttct---cta--ttg--at--aagttt-gc-t---ttt--tt--cc---c-acag-t
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290096 40 +  12879189 ---tct-ttat---cta--tgg--atac--gttt-tg-c---ttt--tt--cttttc-cata-a
i Daubentonia_madagascariensis.ctg71                     I 3 C 0
s Erythrocebus_patas.Contig38                               259916 40 +  21539334 cgatct-ttct---cca--ttg--ataa--attt-gc-t---ttt--tt--cc---c-atag-t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galago_moholi.ctg3793                                     121155 43 -    137831 CACTCT-TCAT---CTA--TTG--ATAA--GTTT-TG-C---TTT--TT--CTTTTC-CACA-G
i Galago_moholi.ctg3793                                  I 266 I 333
s Galago_senegalensis.k141_991736                             4696 43 +     22493 CACTCT-TCAT---CTA--TTG--ATAA--GTTT-TG-C---TTT--TT--CTTTTC-CACA-G
i Galago_senegalensis.k141_991736                        I 266 I 333
s Galagoides_demidoff.k141_561628                            16751 43 -     32986 CATTCT-TCAT---CTA--TTG--ATAA--GTTT-TG-C---TTT--TT--CTTTTC-CACA-G
i Galagoides_demidoff.k141_561628                        I 1542 I 334
s Galeopterus_variegatus.GalVar_scaffold_74466               16502 42 +     18121 cactct-ttat---ctg--ttg--ataa--gttt-tg-c---tttgctt--tt---c-catt-g
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               2051 40 -      8343 tgatct-ttct---cca--ttg--ataa--gttt-gc-a---ttt--tt--cc---c-cata-g
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251541 40 - 186649187 tgatct-ttct---cca--ttg--ataa--gttt-gc-a---ttt--tt--cc---c-cata-g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    139808 41 -    630532 cgatct-ttct---cca-tttg--atga--gttt-gc-g---ttt--tt--cc---c-cata-g
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               2470 41 +     12352 cgatct-ttct---cca-tttg--atga--gttt-gc-g---ttt--tt--cc---c-cata-g
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9653 41 +     55766 caatct-ttct---cca-tttg--atga--gttt-gc-g---ttt--tt--cc---c-cata-g
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2048992 41 + 191637585 cgatct-ttct---cca-tttg--atga--gttt-gc-g---ttt--tt--cc---c-cata-g
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798324 41 +  11177569 cgatct-ttct---cca-tttg--atga--gttt-gc-g---ttt--tt--cc---c-cata-g
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_1634743                                    1418 39 -      1784 ---tc--tcat---cta--ttg--ataa--gttt-tg-c---ttt--tt--cttttc-cat-ag
i Indri_indri.k141_1634743                               I 228 I 6
s Lagothrix_lagothricha.k141_246028                          40736 40 +    110728 cactct-ttca---ctg--ttg--ataa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1418 40 -     13097 CACTCC-TTCT---CTG--TTG--ATAA--GTTT-GC-T---TTT--CT--CC---C-CATA-G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1369 40 +      5940 CACTCC-TTCT---CTG--TTG--ATAA--GTTT-GC-T---TTT--CT--CC---C-CATA-G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1000 40 -      5717 CACTCT-TTCT---CTG--TTG--ATAA--GTTT-GC-T---TTT--CT--CC---C-CATA-G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7635 40 -     11567 CACTCT-TTCT---CTG--TTG--ATAA--GTTT-GC-T---TTT--CT--CC---C-CATA-G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9016 40 -     12945 CACTCT-TTCT---CTG--TTG--ATAA--GTTT-GC-T---TTT--CT--CC---C-CATA-G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6445 39 +     29618 ---tc-ttcat---cta--ttg--ataa--attt-tg-c---ttt--tt--cttttc-cat--g
i Lepilemur_ankaranensis.k141_567626                     I 3 C 0
s Lepilemur_dorsalis.k141_387009                              6442 39 +     31569 ---tc-ttcat---cta--ttg--ataa--attt-tg-c---ctt--tt--cttttc-cat--g
i Lepilemur_dorsalis.k141_387009                         I 3 C 0
s Lepilemur_ruficaudatus.k141_330196                          6453 36 +     24756 ---tc-ttcat---cta--ttg--ataa--attt-tg-c---ttt--tt--cttttc-c-----
i Lepilemur_ruficaudatus.k141_330196                     I 3 C 0
s Lepilemur_septentrionalis.k141_360456                       6446 39 +     16388 ---tc-ttcat---cta--ttg--ataa--attt-tg-c---ttt--tt--cttttc-cat--g
i Lepilemur_septentrionalis.k141_360456                  I 3 C 0
s Lepus_americanus.LepAme_scaffold_56121                     13594 18 +     24238 --------TACTTTTTG--TTG--GTAA--GT--------------------------------
i Lepus_americanus.LepAme_scaffold_56121                 I 1857 I 19
s Lophocebus_aterrimus.ctg367                               330088 38 -   1826925 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7480 46 +     19643 ---ttt-tttt---tcaggttgtcatag--gggt-at-a---tatgatt--tggttg-cata-g
i Loris_lydekkerianus.k141_2031736                       I 615 T 327
s Loris_tardigradus.ctg83                                  5041140 46 -   6120653 ---tct-tttt---tcaggttgtcatag--gggt-at-a---tatgatt--tggttg-cata-g
i Loris_tardigradus.ctg83                                I 616 T 327
s Macaca_arctoides.k141_1757516                              42373 37 -     61512 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--t---cc---c-acag-t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370001 37 -  60120075 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--t---cc---c-acag-t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22321 38 +     30207 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19424 38 -     24934 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22207 38 +     30527 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33397 38 -     50087 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43135 38 +     51645 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411709 38 - 187317192 CGATCT-TTCT---CCA--Ttg--at----gttt-gc-t---ttt--tt--cc---c-acAG-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396592 38 +  25927173 CGATCT-TTCT---CCA--Ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45723 38 -     62418 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22411 38 +     24253 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42166 38 +     59329 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268000 38 +    668171 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19346 38 +     21031 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               33079 38 +     33478 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319476 38 +  24302211 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354308 38 -    752769 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-gcag-t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_582562                                 7377 40 +     17804 cagtct-ttct---ctg--ttg--ataa--gttt-gc-a---ttt--ct--cc---c-cata-g
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8161 40 -     12984 cactct-ttct---ctg--ttg--ataa--gttt-gc-a---ttt--ct--cc---c-cata-g
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16112 40 -     26561 cactct-ttct---ctg--ttg--ataa--gttt-gc-c---ttt--ct--cc---c-cata-g
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982054 39 +  93316391 ---TC-TTCAT---CTA--TTG--ataa--gttt-tg-c---ttt--tt--cttttc-tat--g
i Microcebus_murinus.CM007674.1                          I 3 I 1
s Miopithecus_ogouensis.k141_1534655                         19468 40 -     27822 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-atag-t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     49912 39 -     62432 ---tc-ttcat---cta--ttg--ataa--gttt-tg-c---ttt--tt--cttttc-tat--g
i Mirza_zaza.k141_766280                                 I 3 I 1
s Nasalis_larvatus.k141_1350636                              26082 41 +     34575 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---ccacag-t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           50731 41 -    132029 cgatct-ttct---cca-tttg--atga--gttt-gc-g---ttt--tt--cc---c-cata-g
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6826 41 -     16345 cgatct-ttct---cca-tttg--atga--gttt-gc-g---ttt--tt--cc---c-cata-g
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12711 41 +     22201 cgatct-ttct---cca-tttg--atga--gttt-gc-g---ttt--tt--cc---c-cata-g
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411046 41 -  22158432 cgatct-ttct---cca-tttg--atga--gttt-gc-g---ttt--tt--cc---c-cata-g
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23109 41 -     54323 cgatct-ttct---cca-tttg--atga--gttt-gc-g---ttt--tt--cc---c-cata-g
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93632439 43 + 196305487 cactct-tcat---cta--tta--ataa--gttt-tg-c---ttt--tt--cttttc-caca-g
i Nycticebus_bengalensis.LG01                            I 290 I 335
s Nycticebus_coucang.k141_8166032                             1828 43 +      2758 cactct-tcat---cta--tta--ataa--gttt-tg-c---ttt--tt--cttttc-caca-g
i Nycticebus_coucang.k141_8166032                        I 290 I 335
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560693 43 - 199412804 cactct-tcat---cta--tta--ataa--gttt-tg-c---ttt--tt--cttttc-caca-g
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 290 C 0
s Oryctolagus_cuniculus.CM000791.1                       107100483 18 - 174332312 --------TACTTTTTG--TTG--GTAA--GT--------------------------------
i Oryctolagus_cuniculus.CM000791.1                       I 1497 I 18
s Otolemur_crassicaudatus.k141_649260                        36280 43 -     51505 CACTCT-TCAT---CTA--TTG--ATAA--GTTT-TG-C---TTT--TT--CTTTTC-CACA-G
i Otolemur_crassicaudatus.k141_649260                    I 257 I 333
s Otolemur_garnettii.GL873799.1                             349294 43 +   1103335 CACTCT-TCAT---CTA--TTG--ataa--gttt-tg-c---ttt--tt--cttttc-caca-g
i Otolemur_garnettii.GL873799.1                          I 255 I 334
s Pan_troglodytes.CM009242.2                               1468930 40 - 189151597 TGATCT-TTCT---CCA--TTG--ATAA--GTTT-GC-A---TTT--TT--CC---C-CATA-G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   240316 38 - 183742232 CGATCT-TTCT---CCA--TTG--AT----GTTT-GC-T---TTT--TT--CC---C-acag-t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6780 38 +     21308 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287819 38 -  20919399 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19435 38 -     27687 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12571 38 +     16796 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19381 38 -     23640 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22870 46 +     31479 ---tct-ttct---tcaggttgtcatag--gggt-ac-a---tacgatt--tggtta-cata-g
i Perodicticus_ibeanus.k141_1921260                      I 600 C 0
s Perodicticus_potto.k141_1854441                            14909 43 -     24908 cactct-tcat---cta--ttg--ataa--gttt-tg-c---ttt--tt--attttc-cata-g
i Perodicticus_potto.k141_1854441                        I 269 I 334
s Piliocolobus_badius.k141_2495623                            6234 40 +      7560 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61942 40 -     63152 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44541 40 +     45295 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2219 40 +      5735 CGATCT-TTCT---CCA--TTG--ATAA--GTTT-GC-T---TTT--TT--CC---C-ACAG-T
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62370 37 +    207309 ----CT-TGCT---CTG--TTG--GTAA--GTTTTGC-T---TTT--CT--CC---C-CACA-G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3490 37 -     25401 ----ct-tgct---ctg--ttg--gtaa--gttttgc-t---ttt--ct--cc---c-caca-g
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29205 37 +     58159 ----ct-tgct---ctg--ttg--gtaa--gttttgc-t---ttt--ct--cc---c-caca-g
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29481 37 +     63561 ----CT-TGCT---CTG--TTG--GTAA--GTTTTGC-T---TTT--CT--CC---C-CACA-G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29244 37 +     51148 ----ct-tgct---ctg--ttg--gtaa--gttttgc-t---ttt--ct--cc---c-caca-g
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554237 37 -   4542175 ----CT-TGCT---CTG--TTG--GTAA--GTTTTGC-T---TTT--CT--CC---C-CACA-G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29228 37 +     51125 ----ct-tgct---ctg--ttg--gtaa--gttttgc-t---ttt--ct--cc---c-caca-g
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5659 38 +     39866 cactct-ttct---c----ttg--ataa--gttt-ac-t---ttt--ct--cc---c-cata-g
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           745 40 -      9282 cactct-ttct---ctg--ttg--ctaa--gttt-gc-t---ttt--ct--ct---c-cata-g
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40146 40 -     87950 cactct-ttct---ctg--ttg--ctaa--gttt-gc-t---ttt--ct--ct---c-cata-g
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40539 40 -     88961 cactct-ttct---ctg--ttg--ctaa--gttt-gc-t---ttt--ct--ct---c-cata-g
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5238 40 -     39403 cactct-ttct---ctg--ttg--ctaa--gttt-gc-t---ttt--ct--ct---c-cata-g
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40192 40 +     87928 cactct-ttct---ctg--ttg--ctaa--gttt-gc-t---ttt--ct--ct---c-cata-g
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5237 38 -     60166 cactct-ttct---c----ttg--ataa--gttt-ac-t---ttt--ct--cc---c-cata-g
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12173 38 -     67232 cactct-ttct---c----ttg--ataa--gttt-ac-t---ttt--ct--cc---c-cata-g
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40089 38 -     90634 CACTCT-TTCT---C----TTG--ATAA--GTTT-AC-T---TTT--CT--CC---C-CATA-G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41557 38 +     89403 cactct-ttct---c----ttg--ataa--gttt-ac-t---ttt--ct--cc---c-cata-g
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174557 40 - 189387572 TGATCT-TTCT---CCA--TTG--ATAA--GTTT-GC-A---TTT--TT--CC---C-CATA-G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189555 40 -   9816681 tgatct-ttct---cca--ttg--ataa--gttt-gc-a---ttt--tt--cc---c-cata-g
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24716 40 +     69807 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--ct---c-acag-t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41911 40 -     80239 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--ct---c-acag-t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563535 39 -   2598838 ---TC--TCAT---CTA--TTG--ataa--gttt-tg-c---ttt--tt--cttttc-cat-ag
i Propithecus_coquerelli.NW_012148875.1                  I 3 C 0
s Propithecus_coronatus.k141_209299                           1171 39 -      7103 ---tc--tcat---cta--ttg--ataa--gttt-tg-c---ttt--tt--cttttc-cat-ag
i Propithecus_coronatus.k141_209299                      I 3 C 0
s Propithecus_diadema.k141_153680                             1768 39 -     11706 ---tc--tcat---cta--ttg--ataa--gttt-tg-c---ttt--tt--cttttc-cat-ag
i Propithecus_diadema.k141_153680                        I 3 C 0
s Propithecus_edwardsi.k141_635656                            5503 39 -     30655 ---tc--tcat---cta--ttg--ataa--gttt-tg-c---ttt--tt--cttttc-cat-ag
i Propithecus_edwardsi.k141_635656                       I 3 C 0
s Propithecus_perrieri.k141_1496898                          31829 39 +     46564 ---tc--tcat---cta--ttg--ataa--gttt-tg-c---ttt--tt--cttttc-cat-ag
i Propithecus_perrieri.k141_1496898                      I 3 C 0
s Propithecus_tattersalli.k141_1127767                       92100 39 -     98465 ---tc--tcat---cta--ttg--ataa--gttt-tg-c---ttt--tt--cttttc-cat-ag
i Propithecus_tattersalli.k141_1127767                   I 3 C 0
s Propithecus_verreauxi.k141_1047036                          5736 39 +     35169 ---tc--tcat---cta--ttg--ataa--gttt-tg-c---ttt--tt--cttttc-cat-ag
i Propithecus_verreauxi.k141_1047036                     I 3 C 0
s Pygathrix_cinerea.k141_1153803                             24107 40 +     91421 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150600 40 -   7812017 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              4977 40 +     72585 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_221883                            25937 40 +     27361 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--ct--cc---c-acag-t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119285 40 + 195417433 CGATCT-TTCT---CCA--TTG--ATAA--GTTT-GC-T---TTT--CT--CC---C-ACAG-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233545 40 -   7961872 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--ct--cc---c-acag-t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               1330 40 +     27962 cactct-ttct---ctg--ctg--ataa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1340 40 +      6077 CACTCT-TTCT---CTG--CTG--ATAA--GTTT-GC-T---TTT--CT--CC---C-CATA-G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1358 40 +      5971 CACTCC-TTCT---CTG--CTG--ATAA--GTTT-GC-T---TTT--CT--CC---C-CATA-G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1413 40 +      5932 CACTCC-TTCT---CTG--CTG--ATAA--GTTT-GC-T---TTT--CT--CT---C-CATA-G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1559 38 -      2099 cactct-ttct---ctg--ctg--at----gttt-gc-t---ttt--ct--cc---c-cata-g
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388678 40 - 209938924 cactct-ttct---ctg--ctg--ataa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1360 40 +      5979 cactct-ttct---ctg--ctg--ataa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1739 40 -      4301 CACTCT-TTCT---CTG--CTG--ATAA--GTTT-GC-T---TCT--CT--CC---C-CATA-G
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235829 22 +   5703754 --------------------------aa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Sapajus_apella.ctg103                                  I 7 C 0
s Sapajus_macrocephalus.k141_796559                           5419 22 +     21866 --------------------------aa--gttt-gc-t---ttt--ct--cc---c-cata-g
i Sapajus_macrocephalus.k141_796559                      I 7 C 0
s Semnopithecus_entellus.k141_158471                         22424 40 +     27374 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25943 40 +     58920 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12439 40 -     45317 cgatct-ttct---cca--ttg--atag--gttt-gc-t---ttt--tt--cc---c-acag-t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20097 40 -     42441 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22777 40 -     29113 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25846 40 -     48123 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388018 41 +   1523678 cgatct-ttct---cca-tttg--atga--gttt-gc-g---ttt--tt--cc---c-cata-g
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                4522 31 +      6850 ----------T---TTC--TTT--TTAT--TTTC-TG-T---TTT--TT--GC---C-GGCA-T
i Tarsius_lariang.k141_1780720                           C 0 I 10
s Tarsius_wallacei.k141_226975                                4561 31 +     20590 ----------T---TTC--TTT--TTAT--TTTC-TG-T---TTT--TT--GC---C-GGCA-T
i Tarsius_wallacei.k141_226975                           C 0 I 10
s Theropithecus_gelada.CM009954.1                           350302 38 - 186847797 CGATCT-TTCT---CCA--TTg--at----gttt-gc-t---ttt--tt--cc---c-aCAG-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        17988 40 +     26378 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30672 40 -     78344 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17309 40 +     25722 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25534 40 -     62838 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25651 40 +     46913 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6459 40 -     28527 tgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27473 40 -     64340 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25510 40 -     63452 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6953 40 +     22490 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          383 38 -      6147 cgatct-ttct---cca--ttg--at----gttt-gc-t---ttt--tt--cc---c-acag-t
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7375 40 -     13050 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252614 40 -   6242583 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58345 40 +     59866 cgatct-ttct---cca--ttg--ataa--gttt-gc-t---ttt--tt--cc---c-acag-t
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830836 42 -   4065304 cactc---tac---cag--ttg--gtaa--attt-tg-c---tgtgcatagtt---t-cata-c
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5365 42 -     70247 CACTC---TAC---CAG--TTG--GTAA--GTTT-TG-C---TGCGCATAGTT---T-CATA-C
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  22599 36 -     30710 ---tc--tt------ta--ttg--ataa--gttt-tg-c---ttt--tt--cttttc-cata-g
i Varecia_rubra.k141_787544                              I 3 C 0
s Varecia_variegata.k141_289850                              21506 36 -    147434 ---tc--tt------ta--ttg--ataa--gttt-tg-c---ttt--tt--cttttc-cata-g
i Varecia_variegata.k141_289850                          I 3 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    41190  0 +    145209 C
e Echinops_telfairi.JH980293.1                            62850875  0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_171931              10580  0 -     14239 C
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862241 96 -  20541912 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17402 24 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107724 24 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10395 25 -     19938 I
e Carollia_perspicillata.CarPer_scaffold_170178               2569 95 +      5315 I
e Zalophus_californianus.ZalCal_flattened_line_17732         25894  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102244  0 -    112863 C
e Ursus_maritimus.KK499267.1                                178621  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              3731  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          1726  0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        36520  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1448673  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195481  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11465886  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14351939  0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5500  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23004  0 -     74585 C
e Lycaon_pictus.CM007581.1                                41611863  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810491  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913135  0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104278  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41612708  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          219583  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6222  0 -     23171 C
e CanFam4.chr16                                           42502592  0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2497 96 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412096  0 +  29979442 C
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104549  0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    477245 96 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    102334  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      188379  0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 285 24 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11221 104 +     22964 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             121761  0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1855993  0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113317  0 +    313613 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72407 95 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2911041 105 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096091  0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3534959 101 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838398 95 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49427 96 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12123  0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969265  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18458540  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21214  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125012 93 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117167 24 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   15355  0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176361 96 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182184 96 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       147948 106 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Manis_pentadactyla.KN006162.1                             218000  0 +    317179 C
e Manis_javanica.JSZB01003497.1                             670709  0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220768 95 -    270270 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66057  0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47009 105 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547693 105 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                27601  0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 24624  0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113276  0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Equus_przewalskii.KK951119.1                              409331  0 -    498745 C
e Equus_caballus.CM000403.2                               21372545  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3038611  0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3804 93 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  136422  0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  661629  0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1063  0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           248 100 -      8242 I
e Condylura_cristata.JH655891.1                           35804580  0 +  53390261 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16178  0 +     27315 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174210 98 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           809829  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       1729 5 +     36723 T---TTTT
s Allenopithecus_nigroviridis.k141_3755588                   45013 5 +     53615 t---tttt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40835 5 +     44087 t---tttt
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13541 5 -     21945 t---tttt
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15217 5 +     32033 t---tttt
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69724 5 -     84148 t---tttt
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41953 5 -     78289 t---tttt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41403 5 +     55831 t---tttt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39841 5 -     64179 t---tttt
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21487 5 -     24835 t---tttt
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38470 5 +     45454 t---tttt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44169 5 +     70886 t---tttt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6293 5 +     30854 t---tttt
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30432 5 +     42133 t---tttt
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   48250 5 -     65372 t---tttt
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             41997 5 +     43593 t---tttt
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670010 5 +   5030052 T---TTTT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21652 5 -     23494 t---tttt
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6788 5 +      8415 t---tttt
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       17493 6 -     45910 tt--tgtt
i Arctocebus_calabarensis.k141_1364444                   C 0 T 330
s Ateles_geoffroyi_b.tarseq_1536                               272231 5 +  21539123 t---tttt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8398 5 +     48076 t---tttt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3535 5 -     28759 t---tttt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31088 5 +     44353 t---tttt
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46459 5 -     71267 T---TTTT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20518 5 -     33135 t---tttt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3694 6 +     11645 tt--tttt
i Avahi_laniger.k141_2756659                             C 0 I 2
s Avahi_peyrierasi.k141_1823318                               3695 6 -     19611 tt--tttt
i Avahi_peyrierasi.k141_1823318                          C 0 I 2
s Cacajao_ayresi.k141_96119                                   5417 5 +     28062 C---TTTT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40711 5 -     91139 C---TTTT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18237 5 +     95584 C---TTTT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18150 5 +    119600 C---TTTT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7645 5 +     18648 t---tttt
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7318 5 -     13885 T---TTTT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16006 5 +     17162 t---tttt
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450961 5 + 189096842 T---TTTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17254 5 -     18408 t---tttt
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267871 5 +    496798 T---CTTT
i Carlito_syrichta.NW_007259797.1                        I 10 C 0
s Cebuella_niveiventris.k141_592277                           2540 5 -     12580 T---TTTT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40426 5 +     53515 t---tttt
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368627 5 -  26074798 t---tttt
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5516 5 -     34880 t---tttt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64611 5 -     89041 t---tttt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1043 5 -      1636 T---CTTT
i Cephalopachus_bancanus.k141_72622                      I 10 C 0
s Cercocebus_atys.KQ010504.1                                138173 5 -   4669795 T---TTTT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41913 5 +     47900 t---tttt
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41746 5 -     44860 t---tttt
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41729 5 -    148725 t---tttt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24794 5 -     40656 t---tttt
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4730 5 +     20796 t---tttt
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8986 5 -     17524 t---tttt
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24675 5 -     34525 t---tttt
i Cercopithecus_hamlyni.k141_566925                      I 1 C 0
s Cercopithecus_lowei.k141_2101310                            9384 5 -     25376 t---tttt
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361950 5 -  39242232 t---tttt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267694 5 +  21565898 t---tttt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29152 5 -     45857 t---tttt
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24939 5 -     32606 t---tttt
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1125 5 +      8499 t---tttt
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22644 5 +     70610 t---tttt
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19503 5 +     36323 t---tttt
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             28126 6 -     33796 tt--tttt
i Cheirogaleus_major.k141_666340                         I 1 C 0
s Cheirogaleus_medius.k141_759766                             2314 6 -     15404 tt--tttt
i Cheirogaleus_medius.k141_759766                        I 1 I 342
s Cheracebus_lucifer.k141_2312002                             6525 5 -     32913 c---tttt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16938 5 -     40346 c---tttt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17202 5 +    216457 c---tttt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16986 5 +     39636 c---tttt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1372 5 +      5346 t---tttt
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40057 5 -    112038 C---TTTT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5629 5 +     34062 C---TTTT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340400 5 +  18827391 t---tttt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7011 5 -     44032 t---tttt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301725 5 - 135778131 t---tttt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406280 4 -   2368649 T---TTT-
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375443 4 - 200372422 t---ttt-
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              6169 4 -      6605 t---ttt-
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290136 6 +  12879189 tt--ttct
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                               259956 5 +  21539334 t---tttt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galago_moholi.ctg3793                                     121531 6 -    137831 tt--tttt
i Galago_moholi.ctg3793                                  I 333 T 333
s Galago_senegalensis.k141_991736                             5072 6 +     22493 tt--tttt
i Galago_senegalensis.k141_991736                        I 333 T 333
s Galagoides_demidoff.k141_561628                            17128 6 -     32986 tt--tgtt
i Galagoides_demidoff.k141_561628                        I 334 T 334
s Galeopterus_variegatus.GalVar_scaffold_74466               16544 5 +     18121 t---tttt
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 42
s Gorilla_beringei.k141_3358147                               2091 5 -      8343 t---tttt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251581 5 - 186649187 t---tttt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    139849 5 -    630532 t---tttc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               2511 5 +     12352 t---tttc
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9694 5 +     55766 t---tttc
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2049033 5 + 191637585 t---tttc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798365 5 +  11177569 t---tttc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                    1190 6 -      1527 tt--tttt
i Indri_indri.k141_4600452                               I 42 I 42
s Lagothrix_lagothricha.k141_246028                          40776 5 +    110728 t---tttt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1458 5 -     13097 T---TTTT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1409 5 +      5940 T---TTTT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1040 5 -      5717 T---TTTT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7675 5 -     11567 T---TTTT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9056 5 -     12945 T---TTTT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6484 4 +     29618 ----tttt
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6481 4 +     31569 ----tttt
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6489 6 +     24756 tt--tttt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6485 4 +     16388 ----tttt
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     13631 5 +     24238 T---TTTC
i Lepus_americanus.LepAme_scaffold_56121                 I 19 C 0
s Lophocebus_aterrimus.ctg367                               330126 5 -   1826925 t---tttt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7199 6 +     19643 tt--tttg
i Loris_lydekkerianus.k141_2031736                       T 327 C 0
s Loris_tardigradus.ctg83                                  5040859 6 -   6120653 tt--tttg
i Loris_tardigradus.ctg83                                T 327 C 0
s Macaca_arctoides.k141_1757516                              42410 5 -     61512 t---tttt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370038 5 -  60120075 t---tttt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22359 5 +     30207 t---tttt
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19462 5 -     24934 t---tttt
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22245 5 +     30527 t---tttt
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33435 5 -     50087 t---tttt
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43173 5 +     51645 t---tttt
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411747 5 - 187317192 T---TTTT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396630 5 +  25927173 t---tttt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45761 5 -     62418 t---tttt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22449 5 +     24253 t---tttt
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42204 5 +     59329 t---tttt
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268038 5 +    668171 t---tttt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19384 5 +     21031 t---tttt
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               33117 5 +     33478 t---tttt
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319514 5 +  24302211 t---tttt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354346 5 -    752769 t---tttt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_582562                                 7417 5 +     17804 t---tttt
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8201 5 -     12984 t---tttt
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16152 5 -     26561 t---tttt
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982094 6 +  93316391 tt--TTTT
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         19508 5 -     27822 t---tttt
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     49952 6 -     62432 tt--tttt
i Mirza_zaza.k141_766280                                 I 1 C 0
s Nasalis_larvatus.k141_1350636                              26123 4 +     34575 t---ttt-
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           50772 5 -    132029 t---tttc
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6867 5 -     16345 t---tttc
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12752 5 +     22201 t---tttc
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411087 5 -  22158432 t---tttc
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23150 5 -     54323 t---tttc
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93632817 6 + 196305487 tt--tgtt
i Nycticebus_bengalensis.LG01                            I 335 T 335
s Nycticebus_coucang.k141_8166032                             2206 6 +      2758 tt--tgtt
i Nycticebus_coucang.k141_8166032                        I 335 T 323
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560736 6 - 199412804 t--ctttg
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107100519 4 - 174332312 T---T-TC
i Oryctolagus_cuniculus.CM000791.1                       I 18 C 0
s Otolemur_crassicaudatus.k141_649260                        36656 6 -     51505 tt--tttt
i Otolemur_crassicaudatus.k141_649260                    I 333 T 333
s Otolemur_garnettii.GL873799.1                             349671 6 +   1103335 tt--ttTT
i Otolemur_garnettii.GL873799.1                          I 334 T 334
s Pan_troglodytes.CM009242.2                               1468970 5 - 189151597 T---TTTT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   240354 5 - 183742232 t---tttt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6818 5 +     21308 t---tttt
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287857 5 -  20919399 t---tttt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19473 5 -     27687 t---tttt
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12609 5 +     16796 t---tttt
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19419 5 -     23640 t---tttt
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22916 6 +     31479 tt--tgtt
i Perodicticus_ibeanus.k141_1921260                      C 0 T 335
s Perodicticus_potto.k141_1854441                            15286 6 -     24908 tt--tgtt
i Perodicticus_potto.k141_1854441                        I 334 T 335
s Piliocolobus_badius.k141_2495623                            6274 4 +      7560 t---ttt-
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61982 4 -     63152 t---ttt-
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44581 4 +     45295 t---ttt-
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2259 4 +      5735 T---TTT-
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62407 5 +    207309 C---TTTT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3527 5 -     25401 c---tttt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29242 5 +     58159 c---tttt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29518 5 +     63561 C---TTTT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29281 5 +     51148 c---tttt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554274 5 -   4542175 C---TTTT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29265 5 +     51125 c---tttt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5697 5 +     39866 c---tttt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           785 5 -      9282 c---tttt
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40186 5 -     87950 c---tttt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40579 5 -     88961 c---tttt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5278 5 -     39403 c---tttt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40232 5 +     87928 c---tttt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5275 5 -     60166 c---tttt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12211 5 -     67232 c---tttt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40127 5 -     90634 C---TTTT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41595 5 +     89403 c---tttt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174597 5 - 189387572 T---TTTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189595 5 -   9816681 t---tttt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24756 4 +     69807 t---ttt-
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41951 4 -     80239 t---ttt-
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563574 7 -   2598838 ttt-tttt
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1210 7 -      7103 ttt-tttt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1807 7 -     11706 ttt-tttt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5542 8 -     30655 tttttttt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31868 7 +     46564 ttt-tttt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92139 7 -     98465 ttt-tttt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5775 8 +     35169 tttttttt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24147 4 +     91421 t---ttt-
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150640 4 -   7812017 t---ttt-
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5017 4 +     72585 t---ttt-
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_221883                            25977 4 +     27361 t---ttt-
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119325 4 + 195417433 T---TTT-
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233585 4 -   7961872 t---ttt-
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               1370 5 +     27962 t---tttt
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1380 5 +      6077 T---TTTT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1398 5 +      5971 T---TTTT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1453 5 +      5932 T---TTTT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1597 5 -      2099 t---tttt
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388718 5 - 209938924 t---tttt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1400 5 +      5979 t---tttt
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1779 5 -      4301 T---TTTT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235851 5 +   5703754 t---tttt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5441 5 +     21866 t---tttt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         22464 4 +     27374 t---ttt-
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25983 4 +     58920 t---ttt-
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12479 4 -     45317 t---ttt-
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20137 4 -     42441 t---ttt-
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22817 4 -     29113 t---ttt-
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25886 4 -     48123 t---ttt-
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388059 5 +   1523678 t---tttc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                4563 5 +      6850 T---CTTT
i Tarsius_lariang.k141_1780720                           I 10 C 0
s Tarsius_wallacei.k141_226975                                4602 5 +     20590 T---CTTT
i Tarsius_wallacei.k141_226975                           I 10 C 0
s Theropithecus_gelada.CM009954.1                           350340 5 - 186847797 T---TTTT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18028 4 +     26378 t---ttt-
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30712 4 -     78344 t---ttt-
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17349 4 +     25722 t---ttt-
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25574 4 -     62838 t---ttt-
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25691 4 +     46913 t---ttt-
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6499 4 -     28527 t---ttt-
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27513 4 -     64340 t---ttt-
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25550 4 -     63452 t---ttt-
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6993 4 +     22490 t---ttt-
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          421 4 -      6147 t---ttt-
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7415 4 -     13050 t---ttt-
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252654 4 -   6242583 t---ttt-
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58385 4 +     59866 t---ttt-
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830878 5 -   4065304 t---tttt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5407 5 -     70247 T---TTTT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  22635 6 -     30710 tt--tttt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21542 6 -    147434 tt--tttt
i Varecia_variegata.k141_289850                          C 0 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    41190 0 +    145209 C
e Echinops_telfairi.JH980293.1                            62850875 0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_171931              10580 0 -     14239 C
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862241 96 -  20541912 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17402 24 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107724 24 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10395 25 -     19938 I
e Carollia_perspicillata.CarPer_scaffold_170178               2569 95 +      5315 I
e Zalophus_californianus.ZalCal_flattened_line_17732         25894 0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102244 0 -    112863 C
e Ursus_maritimus.KK499267.1                                178621 0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              3731 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          1726 0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        36520 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1448673 0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195481 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11465886 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14351939 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5500 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23004 0 -     74585 C
e Lycaon_pictus.CM007581.1                                41611863 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810491 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913135 0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104278 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41612708 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          219583 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6222 0 -     23171 C
e CanFam4.chr16                                           42502592 0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2497 96 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412096 0 +  29979442 C
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104549 0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    477245 96 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    102334 0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      188379 0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 285 24 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11221 104 +     22964 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             121761 0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1855993 0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113317 0 +    313613 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72407 95 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2911041 105 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096091 0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3534959 101 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838398 95 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49427 96 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12123 0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969265 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18458540 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21214 0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125012 93 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117167 24 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   15355 0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176361 96 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182184 96 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       147948 106 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Manis_pentadactyla.KN006162.1                             218000 0 +    317179 C
e Manis_javanica.JSZB01003497.1                             670709 0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220768 95 -    270270 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66057 0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47009 105 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547693 105 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                27601 0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 24624 0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113276 0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Equus_przewalskii.KK951119.1                              409331 0 -    498745 C
e Equus_caballus.CM000403.2                               21372545 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3038611 0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3804 93 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  136422 0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  661629 0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1063 0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           248 100 -      8242 I
e Condylura_cristata.JH655891.1                           35804580 0 +  53390261 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16178 0 +     27315 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174210 98 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           809829 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       1734 42 +     36723 T--CT--T----ATAGTGTCTTTACATAAATC----------------AATA--ATTAT--TAAT--TACTG
s Allenopithecus_nigroviridis.k141_3755588                   45018 42 +     53615 t--ct--t----atagtgtctttacataaatc----------------gata--attat--taat--tactg
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40840 42 +     44087 t--ct--t----acagtgtctttacataaatt----------------gata--attat--taat--tactg
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13546 42 -     21945 t--ct--t----acagtgtctttacataaatt----------------gata--attat--taat--tactg
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15222 42 +     32033 t--ct--t----acagtgtctttacataaatt----------------gata--attat--taat--tactg
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69729 42 -     84148 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               41958 42 -     78289 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41408 42 +     55831 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39846 42 -     64179 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21492 42 -     24835 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38475 42 +     45454 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44174 42 +     70886 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6298 42 +     30854 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30437 42 +     42133 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   48255 42 -     65372 t--ct--t----atagtgtctttgcatAAATC----------------AGTA--ATTAT--TAAA--TATTG
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42002 42 +     43593 t--ct--t----atagtgtctttgcatAAATC----------------AATA--ATTAT--TAAA--TATTG
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670015 42 +   5030052 T--CT--T----ATAGTGTCTTTGCATAAatc----------------aata--attat--taaa--tattg
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21657 42 -     23494 t--ct--t----atagtgtctttgcatAAATC----------------AATA--ATTAT--TAAA--TATTG
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6793 42 +      8415 t--ct--t----atagtgtctttgcatAAATC----------------AATA--ATTAT--TAAA--TATTG
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       17169 42 -     45910 t--ct--t----atagtgtttttacataaatc----------------AGTA--ATTAT--TTAT--TAGTA
i Arctocebus_calabarensis.k141_1364444                   T 330 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272236 42 +  21539123 t--ct--t----atagtgtatttacgtaaatc----------------AATA--ATTAT--TAAA--TATTG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8403 42 +     48076 t--ct--t----atagtgtatttatgtaaatc----------------AATA--ATTAT--TAAA--TATTG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3540 42 -     28759 t--ct--t----atagtgtatttacgtaaatc----------------AATA--ATTAT--TAAA--TATTG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31093 42 +     44353 t--ct--t----atagtgtatttacgtaaatc----------------AATA--ATTAT--TAAA--TATTG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46464 42 -     71267 T--CT--T----ATAGTGTATTTACGTAAATC----------------AATA--ATTAT--TAAA--TATTG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20523 42 -     33135 t--ct--t----atagtgtatttacgtaaatc----------------AATA--ATTAT--TAAA--TATTG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3702 38 +     11645 ------------ttagtgtttttacatatatt----------------ggta--attat--ttat--tactg
i Avahi_laniger.k141_2756659                             I 2 C 0
s Avahi_peyrierasi.k141_1823318                               3703 38 -     19611 ------------ttagtgtttttacatatatt----------------ggta--attat--ttat--tactg
i Avahi_peyrierasi.k141_1823318                          I 2 C 0
s Cacajao_ayresi.k141_96119                                   5422 42 +     28062 T--CT--T----ATTGTGTCTTTACATAAATC----------------AAAA--ATTAT--TAAA--TACTG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40716 42 -     91139 T--CT--T----ATTGTGTCTTTACATAAATC----------------AAAA--ATTAT--TAAA--TACTG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18242 42 +     95584 T--CT--T----ATTGTGTCTTTACATAAATC----------------AAAA--ATTAT--TAAA--TACTG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18155 42 +    119600 T--CT--T----ATTGTGTCTTTACATAAATC----------------AAAA--ATTAT--TAAA--TACTG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7650 42 +     18648 t--ct--t----acagtgtctttacataaatT----------------AATA--ATTAT--TAAA--CATTG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7323 42 -     13885 T--CT--T----ACGGTGTCTTTACATAAATT----------------AATA--ATGAC--TAAA--TATTG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16011 42 +     17162 t--ct--t----acagtgtctttacataaatT----------------AATA--ATTAT--TAAA--TATTG
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165450966 42 + 189096842 T--CT--T----ACAGTATCTTTGCATAAATT----------------AATA--ATTAT--TAAA--TATTG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17259 42 -     18408 t--ct--t----acagtgtctttacataaatT----------------AATA--ATTAT--TAAA--TATTG
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267876 40 +    496798 T--CT--T----ACTGTGTTTTTGTAT--GTC----------------AGTA--ATTAT--TTGT--TACTG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cebuella_niveiventris.k141_592277                           2545 42 -     12580 T--CT--T----ACAGTGTCTTTACATAAATT----------------AATA--ATTAT--TAAA--CATTG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40431 42 +     53515 t--ct--t----acagtgtctttacataaatT----------------AATA--ATTAT--TAAA--CATTG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368632 42 -  26074798 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5521 42 -     34880 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64616 42 -     89041 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1048 40 -      1636 T--CC--T----ACTGTGTTTTTGTAT--GTC----------------AGTA--ATTAT--TTGT--TACTG
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138178 42 -   4669795 T--CT--T----ATAGTGTCTTTACATAAATC----------------GATA--ATTAT--TAAT--TACTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41918 42 +     47900 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41751 42 -     44860 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41734 42 -    148725 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24799 42 -     40656 t--ct--t----atagtgtctttacataaatc----------------gata--attat--taat--tactg
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4735 42 +     20796 t--ct--t----atagtgtctttacataagtc----------------gata--attat--taat--tactg
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             8991 42 -     17524 t--gt--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACCG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24680 42 -     34525 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9389 42 -     25376 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAC--TACTG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361955 42 -  39242232 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAT--TACTG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267699 42 +  21565898 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAC--TACTG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29157 42 -     45857 t--ct--t----atggtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24944 42 -     32606 t--ct--t----atagtgtctttacataaatc----------------aata--attat--taat--tactg
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1130 42 +      8499 t--ct--t----atagtgtctttacataaatc----------------gata--attat--taat--tactg
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22649 42 +     70610 t--ct--t----atggtgtctttacataaatc----------------AATA--ATTAT--TAAT--TACTG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19508 42 +     36323 t--ct--t----atagtgtctttacatacatc----------------gata--attat--taat--tactg
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             28132 42 -     33796 t--ca--t----atagtgtttttacatacatt----------------ggta--attat--ttat--tactg
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2662 42 -     15404 t--ca--t----atggtgtttttacatacatt----------------ggta--attat--ttat--tactg
i Cheirogaleus_medius.k141_759766                        I 342 C 0
s Cheracebus_lucifer.k141_2312002                             6530 42 -     32913 t--ct--t----acagtgtctttacaaaaatc----------------AATA--ATTAT--TAAA--TATTG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16943 42 -     40346 t--ct--t----acagtgtctttacaaaaatc----------------AATA--ATTAT--TAAA--TATTG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17207 42 +    216457 t--ct--t----acagtgtctttacaaaaatc----------------AATA--ATTAT--TAAA--TATTG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           16991 42 +     39636 t--ct--t----acagtgtctttacaaaaatc----------------AATA--ATTAT--TAAA--TATTG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1377 42 +      5346 t--ct--t----acagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40062 42 -    112038 T--CT--T----ATTGTGTCTTTACATAAATC----------------AATA--ATTAT--TAAA--TACTG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5634 42 +     34062 T--CT--T----ATTGTGTCTTTACATAAATC----------------AATA--ATTAT--TAAA--TACTG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340405 42 +  18827391 t--ct--t----atagtgtctttacataaatT----------------GATA--ATTAT--TAAT--TACTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7016 42 -     44032 t--ct--t----atagtgtctttacataaatt----------------gata--attat--taat--tactg
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301730 42 - 135778131 t--ct--t----atagtgTCTTTACATAAATT----------------GATA--ATTAT--TAAT--TACTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406284 42 -   2368649 T--CT--T----ATAGTATCTTTACATAAATC----------------GGTA--ATTAT--TAAT--TACTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375447 42 - 200372422 t--ct--t----atagtgtctttacataaatc----------------gata--attat--taat--tactg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              6173 42 -      6605 t--ct--t----atagtgtctttacataaatc----------------gata--attat--taat--tactg
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290142 42 +  12879189 t--ct--t----acagtatttttacataaatc----------------agta--attat--ttat--tactg
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                               259961 42 +  21539334 t--ct--t----atagtgtctttacataaatT----------------GATA--ATTAT--TAAT--TACTG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galago_moholi.ctg3793                                     121204 42 -    137831 T--CT--T----ATAGTGTTTTTACATAAATC----------------AGTA--ATTAT--TTAT--TAGTG
i Galago_moholi.ctg3793                                  T 333 C 0
s Galago_senegalensis.k141_991736                             4745 42 +     22493 T--CT--T----ATAGTGTTTTTACATAAATC----------------AGTA--ATTAT--TTAT--TAGTG
i Galago_senegalensis.k141_991736                        T 333 C 0
s Galagoides_demidoff.k141_561628                            16800 42 -     32986 T--CT--T----ATAGTGTTTTTACATAAATC----------------AGTA--ATTAT--TTAT--TAGTG
i Galagoides_demidoff.k141_561628                        T 334 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               4402 44 +      5976 T--TTTTC----TTAGTGTTTTTACCTAAGTC----------------AGTA--ATTAT--TTAT--TACTG
i Galeopterus_variegatus.GalVar_scaffold_132127          I 201 I 5
s Gorilla_beringei.k141_3358147                               2096 42 -      8343 t--ct--t----atagtgtctttacataaatc----------------aata--attat--taat--tactg
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251586 42 - 186649187 t--ct--t----atagtgtctttacataaatc----------------aata--attat--taat--tactg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    139854 42 -    630532 t--ct--t----atagtatctttgcataaatc----------------AATA--ATTAT--TAAT--TACTG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               2516 42 +     12352 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAT--TACTG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9699 42 +     55766 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAT--TACTG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2049038 42 + 191637585 t--ct--t----atagtatctttgcataagtc----------------aata--attat--taat--tactg
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798370 42 +  11177569 t--ct--t----atagtatctttgcataagtc----------------AATA--ATTAT--TAAT--TACTG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_1634743                                    1463 44 -      1784 tttct--t----acagtgttttcacatacatt----------------ggta--attat--ttat--tactg
i Indri_indri.k141_1634743                               I 6 n 42
s Lagothrix_lagothricha.k141_246028                          40781 42 +    110728 t--ct--t----atagtgtctttacataagtc----------------AATA--ATTAT--TAAA--TATTG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1463 42 -     13097 T--CT--T----ACAGTGTCTTTACATAAATC----------------AATA--ATTAT--TAAA--TATTG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1414 42 +      5940 T--CT--T----ACAGTGTCTTTACATAAATC----------------AATA--ATTAT--TAAA--TATTG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1045 42 -      5717 T--CT--T----ACAGTGTCTTTACATAAATC----------------AATA--ATTAT--TAAA--TATTG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7680 42 -     11567 T--CT--T----ACAGTGTCTTTACATAAATT----------------AATA--ATTAT--TAAA--TATTG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9061 42 -     12945 T--CT--T----ACAGTGTCTTTACATAAATT----------------AATA--ATTAT--TAAA--TATTG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6488 42 +     29618 t--ca--t----atagtgtttttatatacatt----------------ggta--tttat--tcat--tactg
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6485 42 +     31569 t--ca--t----atagtgtttttatatacatt----------------ggta--tttat--tcat--tactg
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6495 42 +     24756 t--ca--t----atagtgtttttatatacatt----------------ggta--attat--tcat--tactg
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6489 42 +     16388 t--ca--t----atagtgtttttatatacatt----------------ggta--tttat--tcat--tactg
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     13636 43 +     24238 C--CT--TATAGTG--TGCTTATATATGCCA------------------GTA--ATTATTAACAAATTA---
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 3
s Lophocebus_aterrimus.ctg367                               330131 42 -   1826925 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7205 42 +     19643 t--ct--t----atagtgtttttacataaatc----------------AGTA--ATTAA--TTAT--TAGTG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5040865 42 -   6120653 t--ct--t----atagtgtttttacataaatc----------------AGTA--ATTAA--TTAT--TAGTG
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_1757516                              42415 42 -     61512 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370043 42 -  60120075 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22364 42 +     30207 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19467 42 -     24934 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22250 42 +     30527 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33440 42 -     50087 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43178 42 +     51645 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411752 42 - 187317192 T--CT--T----ATAGTGTCTTTACATAAATC----------------GATA--ATTAT--TAAT--TACTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396635 42 +  25927173 t--ct--t----atagtGTCTTTACATAAATC----------------GATA--ATTAT--TAAT--TACTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45766 42 -     62418 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAT--TACTG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22454 42 +     24253 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42209 42 +     59329 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268043 42 +    668171 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19389 42 +     21031 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               33122 42 +     33478 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319519 42 +  24302211 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354351 42 -    752769 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_582562                                 7422 42 +     17804 t--ct--t----acagtgtctttacataaatT----------------AATA--ATTAT--TAAA--CATTG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8206 42 -     12984 t--ct--t----acagtgtctttacataaatT----------------AATA--ATTAT--TAAA--CATTG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16157 42 -     26561 t--ct--t----acagtgtctttacataaatT----------------AATA--ATTAT--TAAA--CATTG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982100 42 +  93316391 T--CA--T----ATAGTGTTTTTCTATACACT----------------GCTA--ATTAT--TTAT--TACTG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19513 42 -     27822 t--ct--t----atagtgtctttacataaatc----------------gata--attat--taat--tactg
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     49958 42 -     62432 t--ca--t----atagtgtttttatatacatt----------------ggta--attat--ttat--tactg
i Mirza_zaza.k141_766280                                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              26127 42 +     34575 t--ct--t----atagtgtctttacataaatc----------------gata--cttat--taat--tactg
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           50777 42 -    132029 t--ct--t----atagtatctttgcataaatc----------------AATA--ATTAT--TAAT--TACTG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6872 42 -     16345 t--ct--t----atagtatctttgcataaatc----------------aata--attat--taat--tactg
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12757 42 +     22201 t--ct--t----atagtatctttgcataaatc----------------aata--attat--taat--tactg
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411092 42 -  22158432 t--ct--t----atagtatctttgcataaatc----------------AATA--ATTAT--TAAT--TACTG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23155 42 -     54323 t--ct--t----atagtatctttgcataaatc----------------aata--attat--taat--tactg
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93632488 42 + 196305487 t--ct--t----atagtgttttgacataaatc----------------AGTA--ATTAT--TTAT--TAGTG
i Nycticebus_bengalensis.LG01                            T 335 C 0
s Nycticebus_coucang.k141_8166032                             1889 30 +      2758 --------------------ttgacataaatc----------------AGTA--ATTAT--TTAT--TAGTG
i Nycticebus_coucang.k141_8166032                        T 323 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560742 42 - 199412804 t--ct--t----atagtgttttgacataaatc----------------AGTA--ATTAT--TTAT--TAGTG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107100523 43 - 174332312 C--CT--TATAGNN--NNNNNNNNNNNNNNN------------------NNN--NNNNNNNNNNNNNNN---
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 3
s Otolemur_crassicaudatus.k141_649260                        36329 42 -     51505 T--CT--T----ATAGTGTTTTTACATAAATC----------------GGTA--ATTAT--TTAT--TAGTG
i Otolemur_crassicaudatus.k141_649260                    T 333 C 0
s Otolemur_garnettii.GL873799.1                             349343 42 +   1103335 T--CT--T----ATAGTGTTTTTACATAAATC----------------AGTA--ATTAT--TTAT--TAGTG
i Otolemur_garnettii.GL873799.1                          T 334 C 0
s Pan_troglodytes.CM009242.2                               1468975 42 - 189151597 T--CT--T----ATAGTGTCTTTACATAaatc----------------aata--attat--taat--tacTG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   240359 42 - 183742232 t--ct--t----atagtGTCTTTACATAAATC----------------GATA--ATTAT--TAAT--TACTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6823 42 +     21308 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287862 42 -  20919399 t--ct--t----atagtatctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19478 42 -     27687 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12614 42 +     16796 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19424 42 -     23640 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22587 42 +     31479 t--ct--t----atagtgtttttacataaatc----------------AGTA--ATTAT--TTAT--TAGTA
i Perodicticus_ibeanus.k141_1921260                      T 335 C 0
s Perodicticus_potto.k141_1854441                            14957 42 -     24908 t--ct--t----atagtgtttttacataaatc----------------AGTA--ATTAT--TTAT--TAGTA
i Perodicticus_potto.k141_1854441                        T 335 C 0
s Piliocolobus_badius.k141_2495623                            6278 42 +      7560 t--ct--t----atagtgtctttacataaatc----------------gata--attat--taat--tactg
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        61986 42 -     63152 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44585 42 +     45295 t--ct--t----atagtgtctttacataaatc----------------gata--attat--taat--tactg
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2263 42 +      5735 T--CT--T----ATAGTGTCTTTACATAAATC----------------GATA--ATTAT--TAAT--TACTG
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62412 42 +    207309 T--CT--T----ATTGTGTCTTTACATAAATC----------------AATA--ATTAT--TAAA--TACTG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3532 42 -     25401 t--ct--t----attgtgtctttacataaatc----------------AATA--ATTAT--TAAA--TACTG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29247 42 +     58159 t--ct--t----attgtgtctttacataaatc----------------AATA--ATTAT--TAAA--TACTG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29523 42 +     63561 T--CT--T----ATTGTGTCTTTACATAAATC----------------AATA--ATTAT--TAAA--TACTG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29286 42 +     51148 t--ct--t----attgtgtctttacataaatc----------------AATA--ATTAT--TAAA--TACTG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554279 42 -   4542175 T--CT--T----ATTGTGTCTTTACATAAATC----------------AATA--ATTAT--TAAA--TACTG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29270 42 +     51125 t--ct--t----attgtgtctttacataaatc----------------AATA--ATTAT--TAAA--TACTG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5702 42 +     39866 t--ct--t----acagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           790 42 -      9282 t--ct--t----acagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40191 42 -     87950 t--ct--t----acagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40584 42 -     88961 t--ct--t----acagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5283 42 -     39403 t--ct--t----acagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40237 42 +     87928 t--ct--t----acagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5280 42 -     60166 t--ct--t----acagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12216 42 -     67232 t--ct--t----agagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40132 42 -     90634 T--CT--T----ACAGTGTCTTTACATAAATC----------------AATA--ATTAT--TAAA--TATTG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41600 42 +     89403 t--ct--t----acagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174602 42 - 189387572 T--CT--T----ATAGTGTCTTTACATAAATC----------------AATA--ATTAT--TAAT--TACTG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189600 42 -   9816681 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAT--TACTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24760 42 +     69807 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41955 42 -     80239 t--ct--t----atagtgtctttacataaatc----------------gata--attat--taat--tactg
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563581 42 -   2598838 t--ct--t----acagtgttTGCACATACATT----------------GGTA--ATTAT--TTAT--TACTG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1217 42 -      7103 t--ct--t----acagtgttttcacatacatt----------------ggta--attat--ttat--tactg
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1814 42 -     11706 t--ct--t----acagtgtttgcacatacatt----------------ggta--attat--ttat--tactg
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5550 42 -     30655 t--ct--t----acagtgtttgcacatacatt----------------ggta--attat--ttat--tactg
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31875 42 +     46564 t--ct--t----acagtgtttgcacatacatt----------------ggta--attat--ttat--tactg
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92146 42 -     98465 t--ct--t----acagtgtttgcacatacatt----------------ggta--attat--ttat--tactg
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5783 42 +     35169 t--ct--t----acagtgtttgcacatacatt----------------ggta--attat--ttat--tactg
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24151 42 +     91421 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150644 42 -   7812017 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5021 42 +     72585 t--ct--t----atagtgtctttacataaatc----------------gata--attat--taat--tactg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_221883                            25981 42 +     27361 t--ct--t----atagtgtctttacataaatc----------------gata--attat--taat--tactg
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119329 42 + 195417433 T--CT--T----ATAGTGTCTTTACATAAATC----------------GATA--ATTAT--TAAT--TACTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233589 42 -   7961872 t--ct--t----atagtgtctttacataaatc----------------gata--attat--taat--tactg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               1375 42 +     27962 t--ct--t----acagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1385 42 +      6077 T--CT--T----ACAGTGTCTTTACATAAATC----------------AATA--ATTAT--TAAA--TATTG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1403 42 +      5971 T--CT--T----ACAGTGTCTTTACATAAATC----------------AATA--ATTAT--TCAA--TATTG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1458 42 +      5932 T--CT--T----ACAGTGTCTTTACATAAATC----------------AATA--ATTAT--TCAA--TATTG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1602 42 -      2099 t--ct--t----acagtgtctttacataaatc----------------AATA--ATTGT--TCAA--TATTG
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388723 42 - 209938924 t--ct--t----acagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1405 42 +      5979 t--ct--t----acagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1784 30 -      4301 T--CT--T----ACAGTGTCC----------------------------ATA--ATTAT--TAAA--TATTG
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235856 42 +   5703754 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5446 42 +     21866 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAA--TATTG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         22468 42 +     27374 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      25987 42 +     58920 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12483 42 -     45317 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20141 42 -     42441 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22821 42 -     29113 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25890 42 -     48123 t--ct--t----atagtgtctttacataaatT----------------GATA--ATTAT--TAAT--TACTG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388064 42 +   1523678 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAT--TACTG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                4568 40 +      6850 T--CT--C----ATTGTGTTTTTACAT--GTC----------------AGTA--ATCAT--TTGT--TACTG
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4607 40 +     20590 T--CT--C----ATTGTGTTTTTACAT--GTC----------------AGTA--ATCAT--TTGT--TACTG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350345 42 - 186847797 T--CT--T----ATAGTGTCTTTACATAAATC----------------GATA--ATTAT--TAAT--TACTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18032 42 +     26378 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAT--TACTG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30716 42 -     78344 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17353 42 +     25722 t--ct--t----atagtgtctttacataaatc----------------AATA--ATTAT--TAAT--TACTG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25578 42 -     62838 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25695 42 +     46913 t--ct--t----atagtgtctttacataagtc----------------GATA--ATTAT--TAAT--TACTG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6503 42 -     28527 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27517 42 -     64340 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25554 42 -     63452 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     6997 42 +     22490 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          425 42 -      6147 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7419 42 -     13050 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252658 42 -   6242583 t--ct--t----atagtgtctttacataaatc----------------GATA--ATTAT--TAAT--TACTG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58389 42 +     59866 t--ct--t----atagtgtctttacataagtc----------------GATA--ATTAT--TAAT--TACTG
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1830883 42 -   4065304 t--ct--t----ctagagtttatacataaatc----------------aatg--attat--ttat--tactg
i Tupaia_chinensis.KB320699.1                            C 0 I 257
s Tupaia_tana.TupTan_flattened_line_394                       5412 42 -     70247 T--CT--T----CTAGAGTTTATACATAAATC----------------AATT--ATTAT--TTAT--TACTg
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 253
s Varecia_rubra.k141_787544                                  22641 42 -     30710 t--ct--t----acagtgtttttacatacatt----------------gcta--atcat--ttat--tactg
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21548 42 -    147434 t--ct--t----acagtgtttttacatacatt----------------gcta--atcat--ttat--tactg
i Varecia_variegata.k141_289850                          C 0 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    41190  0 +    145209 C
e Echinops_telfairi.JH980293.1                            62850875  0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_171931              10580  0 -     14239 C
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862241 96 -  20541912 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17402 24 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107724 24 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10395 25 -     19938 I
e Carollia_perspicillata.CarPer_scaffold_170178               2569 95 +      5315 I
e Zalophus_californianus.ZalCal_flattened_line_17732         25894  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102244  0 -    112863 C
e Ursus_maritimus.KK499267.1                                178621  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              3731  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          1726  0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        36520  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1448673  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195481  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11465886  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14351939  0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5500  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23004  0 -     74585 C
e Lycaon_pictus.CM007581.1                                41611863  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810491  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913135  0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104278  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41612708  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          219583  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6222  0 -     23171 C
e CanFam4.chr16                                           42502592  0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2497 96 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412096  0 +  29979442 C
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104549  0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    477245 96 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    102334  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      188379  0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 285 24 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11221 104 +     22964 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             121761  0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1855993  0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113317  0 +    313613 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72407 95 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2911041 105 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096091  0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3534959 101 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838398 95 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49427 96 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12123  0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969265  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18458540  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21214  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125012 93 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117167 24 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   15355  0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176361 96 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182184 96 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       147948 106 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Manis_pentadactyla.KN006162.1                             218000  0 +    317179 C
e Manis_javanica.JSZB01003497.1                             670709  0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220768 95 -    270270 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66057  0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47009 105 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547693 105 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                27601  0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 24624  0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113276  0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Equus_przewalskii.KK951119.1                              409331  0 -    498745 C
e Equus_caballus.CM000403.2                               21372545  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3038611  0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3804 93 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  136422  0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  661629  0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1063  0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           248 100 -      8242 I
e Condylura_cristata.JH655891.1                           35804580  0 +  53390261 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16178  0 +     27315 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174210 98 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           809829  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       1776 5 +     36723 AATTA
s Allenopithecus_nigroviridis.k141_3755588                   45060 5 +     53615 aatta
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40882 5 +     44087 aatta
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13588 5 -     21945 aatta
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15264 5 +     32033 aatta
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69771 5 -     84148 AATTA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42000 5 -     78289 AATTA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41450 5 +     55831 AATTA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39888 5 -     64179 AATTA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21534 5 -     24835 AATTA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38517 5 +     45454 AATTA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44216 5 +     70886 AATTA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6340 5 +     30854 AATTA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30479 5 +     42133 AATTA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   48297 5 -     65372 AATTA
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42044 5 +     43593 AATTA
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670057 5 +   5030052 aatta
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21699 5 -     23494 AATTA
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6835 5 +      8415 AATTA
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       17211 5 -     45910 AATTA
i Arctocebus_calabarensis.k141_1364444                   C 0 I 639
s Ateles_geoffroyi_b.tarseq_1536                               272278 5 +  21539123 AATTA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8445 5 +     48076 AATTA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3582 5 -     28759 AATTA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31135 5 +     44353 AATTA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46506 5 -     71267 AATTA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20565 5 -     33135 AATTA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3740 5 +     11645 aatta
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3741 5 -     19611 aatta
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5464 5 +     28062 AATTA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40758 5 -     91139 AATTA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18284 5 +     95584 AATTA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18197 5 +    119600 AATTA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7692 5 +     18648 AATTA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7365 5 -     13885 AATTA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16053 5 +     17162 AATTA
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451008 5 + 189096842 AATTA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17301 5 -     18408 AATTA
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267916 5 +    496798 AATTA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cebuella_niveiventris.k141_592277                           2587 5 -     12580 AATTA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40473 5 +     53515 AATTA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368674 5 -  26074798 AATTA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5563 5 -     34880 AATTA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64658 5 -     89041 AATTA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1088 5 -      1636 AGTTA
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138220 5 -   4669795 AATTA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41960 5 +     47900 AATTA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41793 5 -     44860 AATTA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41776 5 -    148725 AATTA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24841 5 -     40656 aatta
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4777 5 +     20796 aatta
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9033 5 -     17524 AATTA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24722 5 -     34525 AATTA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9431 5 -     25376 AATTA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  361997 5 -  39242232 AATTA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267741 5 +  21565898 AATTA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29199 5 -     45857 AATTA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24986 5 -     32606 aatta
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1172 5 +      8499 aatta
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22691 5 +     70610 AATTA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19550 5 +     36323 aatta
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             28174 5 -     33796 aatta
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2704 5 -     15404 aatta
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6572 5 -     32913 AATTA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16985 5 -     40346 AATTA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17249 5 +    216457 AATTA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17033 5 +     39636 AATTA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1419 5 +      5346 AATTA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40104 5 -    112038 AATTA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5676 5 +     34062 AATTA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340447 5 +  18827391 AATTA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7058 5 -     44032 aatta
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301772 5 - 135778131 AATTA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406326 5 -   2368649 AATTA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375489 5 - 200372422 aatta
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              6215 5 -      6605 aatta
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290184 5 +  12879189 gatta
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                               260003 5 +  21539334 AATTA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galago_moholi.ctg3793                                     121246 5 -    137831 AATTA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4787 5 +     22493 AATTA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16842 5 -     32986 AATTA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16591 5 +     18121 AATTA
i Galeopterus_variegatus.GalVar_scaffold_74466           I 42 I 16
s Gorilla_beringei.k141_3358147                               2138 5 -      8343 aatta
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251628 5 - 186649187 aatta
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    139896 5 -    630532 AACTA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               2558 5 +     12352 AACTA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9741 5 +     55766 AACTA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2049080 5 + 191637585 aacta
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798412 5 +  11177569 AACTA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                    1238 5 -      1527 aatta
i Indri_indri.k141_4600452                               I 42 C 0
s Lagothrix_lagothricha.k141_246028                          40823 5 +    110728 AATTA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1505 5 -     13097 AATTA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1456 5 +      5940 AATTA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1087 5 -      5717 AATTA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7722 5 -     11567 AATGA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9103 5 -     12945 AATGA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6530 5 +     29618 aatta
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6527 5 +     31569 aatta
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6537 5 +     24756 aattc
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6531 5 +     16388 aatta
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               330173 5 -   1826925 AATTA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7247 5 +     19643 AATTA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5040907 5 -   6120653 AATTA
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_1757516                              42457 5 -     61512 AATTA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370085 5 -  60120075 AATTA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22406 5 +     30207 AATTA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19509 5 -     24934 AATTA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22292 5 +     30527 AATTA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33482 5 -     50087 AATTA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43220 5 +     51645 AATTA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411794 5 - 187317192 AATTA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396677 5 +  25927173 AATTA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45808 5 -     62418 AATTA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22496 5 +     24253 AATTA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42251 5 +     59329 AATTA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268085 5 +    668171 AATTA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19431 5 +     21031 AATTA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               33164 5 +     33478 AATTA
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319561 5 +  24302211 AATTA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354393 5 -    752769 AATTA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_582562                                 7464 5 +     17804 AATTA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8248 5 -     12984 AATTA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16199 5 -     26561 AATTA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982142 5 +  93316391 AATTA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19555 5 -     27822 aatta
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     50000 5 -     62432 aatta
i Mirza_zaza.k141_766280                                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              26169 5 +     34575 aatta
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           50819 5 -    132029 AACTA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6914 5 -     16345 aacta
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12799 5 +     22201 aacta
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411134 5 -  22158432 AACTA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23197 5 -     54323 aacta
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93632530 5 + 196305487 AATTA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1919 5 +      2758 AATTA
i Nycticebus_coucang.k141_8166032                        C 0 I 7
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560784 5 - 199412804 AATTA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        36371 5 -     51505 AATTA
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             349385 5 +   1103335 AATTA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1469017 5 - 189151597 AATTA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   240401 5 - 183742232 AATTA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6865 5 +     21308 AATTA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287904 5 -  20919399 AATTA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19520 5 -     27687 AATTA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12656 5 +     16796 AATTA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19466 5 -     23640 AATTA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22629 5 +     31479 AATTA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            14999 5 -     24908 AATTA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            6320 5 +      7560 aatta
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62028 5 -     63152 AATTA
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44627 5 +     45295 aatta
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2305 5 +      5735 AATTA
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62454 5 +    207309 AATTA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3574 5 -     25401 AATTA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29289 5 +     58159 AATTA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29565 5 +     63561 AATTA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29328 5 +     51148 AATTA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554321 5 -   4542175 AATTA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29312 5 +     51125 AATTA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5744 4 +     39866 AAT-A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           832 4 -      9282 AAT-A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40233 4 -     87950 AAT-A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40626 4 -     88961 AAT-A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5325 4 -     39403 AAT-A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40279 4 +     87928 AAT-A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5322 4 -     60166 AAT-A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12258 4 -     67232 AAT-A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40174 4 -     90634 AAT-A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41642 4 +     89403 AAT-A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174644 5 - 189387572 AATTA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189642 5 -   9816681 AATTA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24802 5 +     69807 AATTA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              41997 5 -     80239 aatta
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563623 5 -   2598838 aatta
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1259 5 -      7103 aatta
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1856 5 -     11706 aatta
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5592 5 -     30655 aatta
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31917 5 +     46564 aatta
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92188 5 -     98465 aatta
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5825 5 +     35169 aatta
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24193 5 +     91421 AATTA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150686 5 -   7812017 AATTA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5063 5 +     72585 aatta
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26023 5 +     27361 aatta
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119371 5 + 195417433 AATTA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233631 5 -   7961872 aatta
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               1417 5 +     27962 AATTA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1427 5 +      6077 AATTA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1445 5 +      5971 AATTA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1500 5 +      5932 AATTA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1644 5 -      2099 AATTA
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388765 5 - 209938924 AATTA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1447 5 +      5979 AATTA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1814 5 -      4301 AATTA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235898 5 +   5703754 AATTA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5488 5 +     21866 AATTA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         22510 5 +     27374 AATTA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26029 5 +     58920 AATTA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12525 5 -     45317 AATTA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20183 5 -     42441 AATTA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22863 5 -     29113 AATTA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25932 5 -     48123 AATTA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388106 5 +   1523678 AACTA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                4608 5 +      6850 AATTA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4647 5 +     20590 AATTA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350387 5 - 186847797 AATTA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18074 5 +     26378 AATTA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30758 5 -     78344 AATTA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17395 5 +     25722 AATTA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25620 5 -     62838 AATTA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25737 5 +     46913 AATTA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6545 5 -     28527 AATTA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27559 5 -     64340 AATTA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25596 5 -     63452 AATTA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7039 5 +     22490 AATTA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          467 5 -      6147 AATTA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7461 5 -     13050 AATTA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252700 5 -   6242583 AATTA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58431 5 +     59866 AATTA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831182 5 -   4065304 aaatt
i Tupaia_chinensis.KB320699.1                            I 257 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5707 5 -     70247 aaaTT
i Tupaia_tana.TupTan_flattened_line_394                  I 253 C 0
s Varecia_rubra.k141_787544                                  22683 5 -     30710 aatta
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21590 5 -    147434 aatta
i Varecia_variegata.k141_289850                          C 0 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    41190 0 +    145209 C
e Echinops_telfairi.JH980293.1                            62850875 0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_171931              10580 0 -     14239 C
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862241 96 -  20541912 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17402 24 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107724 24 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10395 25 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2569 95 +      5315 I
e Zalophus_californianus.ZalCal_flattened_line_17732         25894 0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102244 0 -    112863 C
e Ursus_maritimus.KK499267.1                                178621 0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              3731 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          1726 0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        36520 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1448673 0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195481 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11465886 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14351939 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5500 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23004 0 -     74585 C
e Lycaon_pictus.CM007581.1                                41611863 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810491 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913135 0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104278 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41612708 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          219583 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6222 0 -     23171 C
e CanFam4.chr16                                           42502592 0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2497 96 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412096 0 +  29979442 C
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104549 0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    477245 96 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    102334 0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      188379 0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 285 24 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11221 104 +     22964 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             121761 0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1855993 0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113317 0 +    313613 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72407 95 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2911041 105 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096091 0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3534959 101 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838398 95 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49427 96 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12123 0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969265 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18458540 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21214 0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125012 93 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117167 24 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   15355 0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176361 96 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182184 96 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       147948 106 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Manis_pentadactyla.KN006162.1                             218000 0 +    317179 C
e Manis_javanica.JSZB01003497.1                             670709 0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220768 95 -    270270 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66057 0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47009 105 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547693 105 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                27601 0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 24624 0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113276 0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Equus_przewalskii.KK951119.1                              409331 0 -    498745 C
e Equus_caballus.CM000403.2                               21372545 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3038611 0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3804 93 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  136422 0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  661629 0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1063 0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           248 100 -      8242 I
e Condylura_cristata.JH655891.1                           35804580 0 +  53390261 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16178 0 +     27315 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174210 98 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           809829 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       1781 7 +     36723 ATTG--AAA
s Acinonyx_jubatus.LLWD01001279.1                           809829 3 +   1699592 --c---t-t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412096 3 +  29979442 --c---t-t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45065 7 +     53615 attg--aaa
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40887 7 +     44087 attg--aaa
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13593 7 -     21945 attg--aaa
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15269 7 +     32033 attg--aaa
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69776 7 -     84148 ACTG--AAC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42005 7 -     78289 ACTG--AAC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41455 7 +     55831 ACTG--AAC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39893 7 -     64179 ACTG--AAC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21539 7 -     24835 ACTG--AAC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38522 7 +     45454 ACTG--AAC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44221 7 +     70886 ACTG--AAC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6345 7 +     30854 ACTG--AAC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30484 7 +     42133 ACTG--AAC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   48302 7 -     65372 ACTG--AAA
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42049 7 +     43593 ACTG--AAA
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670062 7 +   5030052 aCTG--AAA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21704 7 -     23494 ACTG--AAA
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6840 7 +      8415 ACTG--AAA
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       17855 9 -     45910 atggccact
i Arctocebus_calabarensis.k141_1364444                   I 639 T 642
s Ateles_geoffroyi_b.tarseq_1536                               272283 7 +  21539123 ACTG--AAA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8450 7 +     48076 ACTG--AAA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3587 7 -     28759 ACTG--AAA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31140 7 +     44353 ACTG--AAA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46511 7 -     71267 ACTG--AAA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20570 7 -     33135 ACTG--AAA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3745 7 +     11645 attg--aat
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3746 7 -     19611 attg--aat
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5469 7 +     28062 ACTG--AAA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40763 7 -     91139 ACTG--AAA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18289 7 +     95584 ACTG--AAA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18202 7 +    119600 ACTG--AAA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7697 7 +     18648 ACTG--AAA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7370 7 -     13885 ACTG--AAA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16058 7 +     17162 ACTG--AAA
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451013 7 + 189096842 ACTG--AAA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17306 7 -     18408 ACTG--AAA
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502592 3 +  60362399 --c---t-t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6222 3 -     23171 --c---t-t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          219583 3 +   9314153 --c---t-t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41612708 3 +  59632846 --c---t-t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104278 3 -  63665305 --c---t-t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           267921 7 +    496798 ATTG--AAA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cebuella_niveiventris.k141_592277                           2592 7 -     12580 ACTG--AAA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40478 7 +     53515 ACTG--AAA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368679 7 -  26074798 ACTG--AAA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5568 7 -     34880 ACTG--AAA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64663 7 -     89041 ACTG--AAA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1093 7 -      1636 ATTG--AAA
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489345 3 -  27778364 --t---g-t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16178 3 +     27315 --t---g-t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138225 7 -   4669795 ATTG--AAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41965 7 +     47900 ATTG--AAA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41798 7 -     44860 ATTG--AAA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41781 7 -    148725 ATTG--AAA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24846 7 -     40656 attg--aaa
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4782 7 +     20796 attg--aaa
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9038 7 -     17524 ATTG--AAA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24727 7 -     34525 ATTG--AAA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9436 7 -     25376 ATTG--AAA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362002 7 -  39242232 ATTG--AAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267746 7 +  21565898 ATTG--AAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29204 7 -     45857 ATTG--AAA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24991 7 -     32606 attg--aaa
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1177 7 +      8499 attg--aaa
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22696 7 +     70610 ATTG--AAA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19555 7 +     36323 attg--aaa
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             28179 7 -     33796 attg--aat
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2709 7 -     15404 actg--aat
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6577 7 -     32913 ATTG--AAA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16990 7 -     40346 ATTG--AAA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17254 7 +    216457 ATTG--AAA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17038 7 +     39636 ATTG--AAA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1424 7 +      5346 ACTG--AAA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40109 7 -    112038 ACTG--AAA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5681 7 +     34062 ACTG--AAA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340452 7 +  18827391 ATTG--AAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7063 7 -     44032 attg--aaa
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301777 7 - 135778131 ATTG--AAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406331 7 -   2368649 ATTG--AAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375494 7 - 200372422 attg--aaa
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              6220 7 -      6605 attg--aaa
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804580 3 +  53390261 --T---A-T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1063 3 +     87169 --c---t-t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290189 7 +  12879189 attt--aat
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661629 3 -   1390856 --t---g-t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136422 3 -    198055 --t---g-t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            62850875 5 - 111700974 -AT---GGT
i Echinops_telfairi.JH980293.1                           C 0 I 389
s Enhydra_lutris.KZ291758.1                               24913135 3 +  41312741 --c---t-t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              3038611 3 -   4378816 --t---c-t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21372545 3 +  39960074 --t---c-t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409331 3 -    498745 --t---c-t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260008 7 +  21539334 ATTG--AAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243494 3 - 206538554 --c---t-t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185113276 3 - 205367284 --c---t-t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 24624 3 -     30238 --c---t-t
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     121251 7 -    137831 ATTG--AAC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4792 7 +     22493 ATTG--AAC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16847 7 -     32986 ATTG--AAC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               4451 6 +      5976 ATT---AAT
i Galeopterus_variegatus.GalVar_scaffold_132127          I 5 C 0
s Gorilla_beringei.k141_3358147                               2143 7 -      8343 attg--aaa
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251633 7 - 186649187 attG--AAA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27601 3 -    327341 --c---t-t
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hoolock_leuconedys.ctg274                                    139901 7 -    630532 ATTG--AAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66057 3 +     83186 --c---t-t
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               2563 7 +     12352 ATTG--AAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9746 7 +     55766 ATTG--AAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2049085 7 + 191637585 attg--aaa
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798417 7 +  11177569 ATTG--AAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                    1243 7 -      1527 attg--aat
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40828 7 +    110728 ACTG--AAA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1510 7 -     13097 ACTG--AAA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1461 7 +      5940 ACTG--AAA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1092 7 -      5717 ACTG--AAA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7727 7 -     11567 ACTG--AAA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9108 7 -     12945 ACTG--AAA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6535 7 +     29618 attg--aat
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6532 7 +     31569 attg--aat
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6542 7 +     24756 attg--aat
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6536 7 +     16388 attg--aat
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810491 3 -   3914936 --c---t-t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               330178 7 -   1826925 ATTG--AAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7252 7 +     19643 ATTG--AAC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5040912 7 -   6120653 ATTG--AAC
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611863 3 +  59628241 --c---t-t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42462 7 -     61512 ATTG--AAA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370090 7 -  60120075 ATTG--AAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22411 7 +     30207 ATTG--AAA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19514 7 -     24934 ATTG--AAA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22297 7 +     30527 ATTG--AAA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33487 7 -     50087 ATTG--AAA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43225 7 +     51645 ATTG--AAA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411799 7 - 187317192 ATTG--AAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396682 7 +  25927173 ATTG--AAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45813 7 -     62418 ATTG--AAA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22501 7 +     24253 ATTG--AAA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42256 7 +     59329 ATTG--AAA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268090 7 +    668171 ATTG--AAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19436 7 +     21031 ATTG--AAA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               33169 7 +     33478 ATTG--AAA
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319566 7 +  24302211 ATTG--AAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354398 7 -    752769 ATTG--AAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670709 3 -    737560 --c---a-t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218000 3 +    317179 --c---a-t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23004 3 -     74585 --c---t-t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mico_argentatus.k141_582562                                 7469 7 +     17804 ACTG--AAA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8253 7 -     12984 ACTG--AAA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16204 7 -     26561 ACTG--AAA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982147 7 +  93316391 ATTG--GAT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41190 5 +    145209 -ac---ggc
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 393
s Miopithecus_ogouensis.k141_1534655                         19560 7 -     27822 attg--aaa
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5500 3 +     27589 --c---t-t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50005 7 -     62432 attg--gat
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15355 3 -     63510 --c---t-t
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mustela_putorius.JH418006.1                             14351939 3 +  14710649 --c---t-t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Nasalis_larvatus.k141_1350636                              26174 7 +     34575 attg--aaa
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465886 3 -  31847680 --c---t-t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Nomascus_annamensis.k141_1771965                           50824 7 -    132029 ATTG--AAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6919 7 -     16345 attg--aaa
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12804 7 +     22201 attg--aaa
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411139 7 -  22158432 ATTG--AAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23202 7 -     54323 attg--aaa
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195481 3 +   9404916 --c---t-t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93632535 7 + 196305487 ATTG--AAC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              233 9 -      3937 atggccact
i Nycticebus_coucang.k141_3846325                        n 7 I 54
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560789 7 - 199412804 ATTG--AAC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448673 3 +   2017862 --c---t-t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              10580 5 -     14239 -at---gtt
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 392
s Otocyon_megalotis.JAEUCK010005147.1                        36520 3 +    559221 --c---t-t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        36376 7 -     51505 ATTG--AAC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             349390 7 +   1103335 ATTg--aac
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1469022 7 - 189151597 ATTG--AAA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21214 3 -    230217 --c---t-t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18458540 3 -  18783137 --c---t-t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3969265 3 +   8748460 --c---t-t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240406 7 - 183742232 ATTG--AAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6870 7 +     21308 ATTG--AAA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287909 7 -  20919399 ATTG--AAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19525 7 -     27687 ATTG--AAA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12661 7 +     16796 ATTG--AAA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19471 7 -     23640 ATTG--AAA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12123 3 +     78924 --c---t-t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22634 7 +     31479 ATTG--AAC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            15004 7 -     24908 ATTG--AAC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            6325 7 +      7560 attg--aaa
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62033 7 -     63152 ATTG--AAA
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44632 7 +     45295 attg--aaa
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2310 7 +      5735 ATTG--AAA
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62459 7 +    207309 ACTG--AAA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3579 7 -     25401 ACTG--AAA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29294 7 +     58159 ACTG--AAA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29570 7 +     63561 ACTG--AAA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29333 7 +     51148 ACTG--AAA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554326 7 -   4542175 ACTG--AAA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29317 7 +     51125 ACTG--AAA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5748 7 +     39866 ATTG--AAA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           836 7 -      9282 ATTG--AAA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40237 7 -     87950 ATTG--AAA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40630 7 -     88961 ATTG--AAA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5329 7 -     39403 ATTG--AAA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40283 7 +     87928 ATTG--AAA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5326 7 -     60166 ATTG--AAA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12262 7 -     67232 ATTG--AAA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40178 7 -     90634 ATTG--AAA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41646 7 +     89403 ATTG--AAA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174649 7 - 189387572 ATTG--AAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189647 7 -   9816681 ATTG--AAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24807 7 +     69807 ATTG--AAA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42002 7 -     80239 attg--aaa
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563628 7 -   2598838 attg--aat
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1264 7 -      7103 attg--aat
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1861 7 -     11706 attg--aat
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5597 7 -     30655 attg--aat
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31922 7 +     46564 attg--aat
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92193 7 -     98465 attg--aat
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5830 7 +     35169 attg--aat
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1726 3 -     18639 --c---t-t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096091 3 +  38429054 --c---t-t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24198 7 +     91421 ATTG--AAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150691 7 -   7812017 ATTG--AAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5068 7 +     72585 attg--aaa
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26028 7 +     27361 attg--aaa
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119376 7 + 195417433 ATTG--AAA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233636 7 -   7961872 attg--aaa
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               1422 7 +     27962 ACTG--AAA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1432 7 +      6077 ACTG--AAA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1450 7 +      5971 ACTG--AAA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1505 7 +      5932 ACTG--AAA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1649 7 -      2099 ACTG--AAA
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388770 7 - 209938924 ACTG--AAA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1452 7 +      5979 ACTG--AAA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1819 7 -      4301 ACTG--AAA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235903 7 +   5703754 ACTG--AAA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5493 7 +     21866 ACTG--AAA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113317 3 +    313613 --g---a-t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22515 7 +     27374 ATTG--AAA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26034 7 +     58920 ATTG--AAA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12530 7 -     45317 ATTG--AAA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20188 7 -     42441 ATTG--AAA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22868 7 -     29113 ATTG--AAA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25937 7 -     48123 ATTG--AAA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855993 3 -   1910179 --C---A-T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              3731 3 -     97271 --c---t-t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             121761 3 +    196729 --c---t-t
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388111 7 +   1523678 ATTG--AAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188379 3 +    199430 --c---c-t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102334 3 -    539355 --c---c-t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4613 7 +      6850 ATTG--AAA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4652 7 +     20590 ATTG--AAA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350392 7 - 186847797 ATTG--AAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18079 7 +     26378 ATTG--AAA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30763 7 -     78344 ATTG--AAA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17400 7 +     25722 ATTG--AAA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25625 7 -     62838 ATTG--AAA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25742 7 +     46913 ATTG--AAA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6550 7 -     28527 ATTG--AAA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27564 7 -     64340 ATTG--AAA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25601 7 -     63452 ATTG--AAA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7044 7 +     22490 ATTG--AAA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          472 7 -      6147 ATTG--AAA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7466 7 -     13050 ATTG--AAA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252705 7 -   6242583 ATTG--AAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58436 7 +     59866 ATTG--AAA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831187 6 -   4065304 att---att
i Tupaia_chinensis.KB320699.1                            C 0 I 11
s Tupaia_tana.TupTan_flattened_line_394                       5712 6 -     70247 ATT---ATT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_7153                   104549 3 -    105689 --T---A-T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                178621 3 +   5085361 --c---t-t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22688 7 -     30710 aatg--aat
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21595 7 -    147434 aatg--aat
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102244 3 -    112863 --c---t-t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         25894 3 -     86975 --c---t-t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862241 96 -  20541912 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17402 24 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107724 24 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10395 25 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2569 95 +      5315 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2497 96 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    477245 96 -    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                 285 24 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11221 104 +     22964 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72407 95 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2911041 105 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Pteropus_vampyrus.KN525825.1                             3534959 101 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838398 95 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49427 96 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125012 93 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117167 24 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176361 96 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182184 96 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       147948 106 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                220768 95 -    270270 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_galeritus.HipGal_scaffold_23202               47009 105 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547693 105 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3804 93 +     19438 I
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           248 100 -      8242 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174210 98 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1788 10 +     36723 TGT-T---TTGAAC
s Acinonyx_jubatus.LLWD01001279.1                           809832  1 +   1699592 t-------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 403
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412099  1 +  29979442 t-------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 655
s Allenopithecus_nigroviridis.k141_3755588                   45072 10 +     53615 tgt-t---ttgaac
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40894 10 +     44087 tgt-t---ttgaac
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13600 10 -     21945 tgt-t---ttgaac
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15276 10 +     32033 tgt-t---ttgaac
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69783 10 -     84148 TGT-T---TTTAAC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42012 10 -     78289 TGT-T---TTTAAC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41462 10 +     55831 TGT-T---TTTAAC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39900 10 -     64179 TGT-T---TTTAAC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21546 10 -     24835 TGT-T---TTTAAC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38529 10 +     45454 TGT-T---TTTAAC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44228 10 +     70886 TGT-T---TTTAAC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6352 10 +     30854 TGT-T---TTTAAC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30491 10 +     42133 TGT-T---TTTAAC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   48309 10 -     65372 TGT-T---TTTAAC
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42056 10 +     43593 TGT-T---TTTAAC
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670069 10 +   5030052 TGT-T---TTTAAC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21711 10 -     23494 TGT-T---TTTAAC
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6847 10 +      8415 TGT-T---TTTAAC
i Aotus_vociferans.k141_944972                           C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       17222  9 -     45910 TTT-TCT----ATT
i Arctocebus_calabarensis.k141_1364444                   T 642 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272290 10 +  21539123 TGT-T---TTTAAC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8457 10 +     48076 TGT-T---TTTAAC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3594 10 -     28759 TGT-T---TTTAAC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31147 10 +     44353 TGT-T---TTTAAC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46518 10 -     71267 TGT-T---TTTAAC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20577 10 -     33135 AGT-T---TTTAAC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3752 11 +     11645 tttct---ttcaat
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3753 11 -     19611 tttct---ttcaat
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5476 10 +     28062 TGT-T---TTTAAC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40770 10 -     91139 TGT-T---TTTAAC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18296 10 +     95584 TGT-T---TTTAAC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18209 10 +    119600 TGT-T---TTTAAC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7704 10 +     18648 TGT-T---TTTAAC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7377 10 -     13885 TGT-T---TTTAGC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16065 10 +     17162 TGT-T---TTTAAC
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451020 10 + 189096842 TGT-T---TTTAAC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17313 10 -     18408 TAT-T---TTTAAC
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42502595  1 +  60362399 t-------------
i CanFam4.chr16                                          C 0 I 430
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6225  1 -     23171 t-------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 436
s Canis_lupus_dingo.QKWQ01000480.1                          219586  1 +   9314153 t-------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 418
s Canis_lupus_familiaris.chr16                            41612711  1 +  59632846 t-------------
i Canis_lupus_familiaris.chr16                           C 0 I 428
s Canis_lupus_orion.HG994398.1                            45104281  1 -  63665305 t-------------
i Canis_lupus_orion.HG994398.1                           C 0 I 439
s Carlito_syrichta.NW_007259797.1                           267928 10 +    496798 TTT-T---TGGAAT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cebuella_niveiventris.k141_592277                           2599 10 -     12580 TGT-T---TTTAAC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40485 10 +     53515 TGT-T---TTTAAC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368686 10 -  26074798 TGT-T---TTTAAC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5575 10 -     34880 TGT-T---TTTAAC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64670 10 -     89041 TGT-T---TTTAAC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1100 10 -      1636 TTT-T---TGGAAT
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489348  1 -  27778364 t-------------
i Ceratotherium_simum.JH767749.1                         C 0 I 420
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16181  1 +     27315 t-------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 420
s Cercocebus_atys.KQ010504.1                                138232 10 -   4669795 TGT-T---TTGAAC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41972 10 +     47900 TGT-T---TTGAAC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41805 10 -     44860 TGT-T---TTGAAC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41788 10 -    148725 TGT-T---TTGAAC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24853 10 -     40656 tgt-t---ttgaac
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4789 10 +     20796 tgt-t---ttgaac
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9045 10 -     17524 TGT-T---TTGAAC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24734 10 -     34525 TGT-T---TTGAAC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9443 10 -     25376 TGT-T---TTGAAC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362009 10 -  39242232 TGT-T---TTGAAC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267753 10 +  21565898 TGT-T---TTGAAC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29211 10 -     45857 TGT-T---TTGAAC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       24998 10 -     32606 tgt-t---ttgaac
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1184 10 +      8499 tgt-t---ttgaac
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22703 10 +     70610 TGT-T---TTGAAC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19562 10 +     36323 tgt-t---ttgaac
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             28186 11 -     33796 tttct---ttcaat
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2716 11 -     15404 tttct---ttcaat
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6584 10 -     32913 TGT-T---TTTAAC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             16997 10 -     40346 TGT-T---TTTAAC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17261 10 +    216457 TGT-T---TTTAAC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17045 10 +     39636 TGT-T---TTTAAC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1431 10 +      5346 TGT-T---TTTAAC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40116 10 -    112038 TGT-T---TTTAAC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5688 10 +     34062 TGT-T---TTTAAC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340459 10 +  18827391 TGT-T---TTGAAC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7070 10 -     44032 tgt-t---ttgaac
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301784 10 - 135778131 TGT-T---TTGAAC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406338 10 -   2368649 TGT-T---TTGAAC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375501 10 - 200372422 tgt-t---ttgaac
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              6227 10 -      6605 tgt-t---ttgaac
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804583  1 +  53390261 T-------------
i Condylura_cristata.JH655891.1                          C 0 I 345
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1066  1 +     87169 t-------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 458
s Daubentonia_madagascariensis.ctg71                        290196 11 +  12879189 tttct---ttcaat
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  661632  1 -   1390856 t-------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 428
s Diceros_bicornis.DicBicMic_scaffold_5955                  136425  1 -    198055 t-------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 420
s Echinops_telfairi.JH980293.1                            62851269  1 - 111700974 C-------------
i Echinops_telfairi.JH980293.1                           I 389 C 0
s Enhydra_lutris.KZ291758.1                               24913138  1 +  41312741 t-------------
i Enhydra_lutris.KZ291758.1                              C 0 I 418
s Equus_asinus.JREZ01000139.1                              3038614  1 -   4378816 t-------------
i Equus_asinus.JREZ01000139.1                            C 0 I 428
s Equus_caballus.CM000403.2                               21372548  1 +  39960074 t-------------
i Equus_caballus.CM000403.2                              C 0 I 428
s Equus_przewalskii.KK951119.1                              409334  1 -    498745 t-------------
i Equus_przewalskii.KK951119.1                           C 0 I 428
s Erythrocebus_patas.Contig38                               260015 10 +  21539334 TGT-T---TTGAAC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243497  1 - 206538554 t-------------
i Felis_catus.CM001381.2                                 C 0 I 403
s Felis_catus_fca126.CM031415.1                          185113279  1 - 205367284 t-------------
i Felis_catus_fca126.CM031415.1                          C 0 I 403
s Felis_nigripes.FelNig_flattened_line_31944                 24627  1 -     30238 t-------------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 403
s Galago_moholi.ctg3793                                     121258 13 -    137831 TTT-TCTTTTGATT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4799 13 +     22493 TTT-TCTTTTGATT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16854 13 -     32986 TTT-TCTTTTGATT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               4457 10 +      5976 TTT-T---TTGAAT
i Galeopterus_variegatus.GalVar_scaffold_132127          C 0 I 136
s Gorilla_beringei.k141_3358147                               2150 10 -      8343 tgt-t---ttgaac
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251640 10 - 186649187 TGT-T---TTGAAC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                27604  1 -    327341 t-------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 429
s Hoolock_leuconedys.ctg274                                    139908 10 -    630532 TGT-T---TAGAAC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66060  1 +     83186 t-------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 450
s Hylobates_agilis.k141_1155965                               2570 10 +     12352 TGT-T---TAGAAC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9753 10 +     55766 TGT-T---TAGAAC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2049092 10 + 191637585 tgt-t---tagaac
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798424 10 +  11177569 TGT-T---TAGAAC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_4600452                                    1250 11 -      1527 tttct---ttcaat
i Indri_indri.k141_4600452                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40835 10 +    110728 TGT-T---TTTAAC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1517 10 -     13097 TGT-T---TTTAAC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1468 10 +      5940 TGT-T---TTTAAC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1099 10 -      5717 TGT-T---TTTAAC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7734 10 -     11567 TGT-T---TTTAAC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9115 10 -     12945 TGT-T---TTTAAC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6542 11 +     29618 tttct---ttcaat
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6539 11 +     31569 tttct---ttcaat
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6549 11 +     24756 tttct---ttcaat
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6543 11 +     16388 tttct---ttcaat
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810494  1 -   3914936 t-------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 412
s Lophocebus_aterrimus.ctg367                               330185 10 -   1826925 TGT-T---TTGAAC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7259 13 +     19643 TTT-TCTTTTGATT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5040919 13 -   6120653 TTT-TCTTTTGATT
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41611866  1 +  59628241 t-------------
i Lycaon_pictus.CM007581.1                               C 0 I 428
s Macaca_arctoides.k141_1757516                              42469 10 -     61512 TGT-T---TTGAAC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370097 10 -  60120075 TGT-T---TTGAAC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22418 10 +     30207 TGT-T---TTGAAC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19521 10 -     24934 TGT-T---TTGAAC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22304 10 +     30527 TGT-T---TTGAAC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33494 10 -     50087 TGT-T---TTGAAC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43232 10 +     51645 TGT-T---TTGAAC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411806 10 - 187317192 TGT-T---TTGAAC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396689 10 +  25927173 TGT-T---TTGAAC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45820 10 -     62418 TGT-T---TTGAAC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22508 10 +     24253 TGT-T---TTGAAC
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42263 10 +     59329 TGT-T---TTGAAC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268097 10 +    668171 TGT-T---TTGAAC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19443 10 +     21031 TGT-T---TTGAAC
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               33176 10 +     33478 TGT-T---TTGAAC
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319573 10 +  24302211 TGT-T---TTGAAC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354405 10 -    752769 TGT-T---TTGAAC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             670712  1 -    737560 t-------------
i Manis_javanica.JSZB01003497.1                          C 0 I 429
s Manis_pentadactyla.KN006162.1                             218003  1 +    317179 t-------------
i Manis_pentadactyla.KN006162.1                          C 0 I 429
s Mellivora_capensis.MelCap_flattened_line_19308             23007  1 -     74585 t-------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 422
s Mico_argentatus.k141_582562                                 7476 10 +     17804 AGT-T---TTTAAC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8260 10 -     12984 AGT-T---TTTAAC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16211 10 -     26561 TGT-T---TTTAAC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982154 11 +  93316391 TTTCT---TTCAAT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41588  1 +    145209 C-------------
i Microgale_talazaci.MicTal_scaffold_6613                I 393 C 0
s Miopithecus_ogouensis.k141_1534655                         19567 10 -     27822 tgt-t---ttgaac
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5503  1 +     27589 t-------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 413
s Mirza_zaza.k141_766280                                     50012 11 -     62432 tttct---ttcaat
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15358  1 -     63510 t-------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 429
s Mustela_putorius.JH418006.1                             14351942  1 +  14710649 t-------------
i Mustela_putorius.JH418006.1                            C 0 I 427
s Nasalis_larvatus.k141_1350636                              26181 10 +     34575 tgt-t---ttgaac
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11465889  1 -  31847680 t-------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 414
s Nomascus_annamensis.k141_1771965                           50831 10 -    132029 TGT-T---TAGAAC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6926 10 -     16345 tgt-t---tagaac
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12811 10 +     22201 tgt-t---tagaac
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411146 10 -  22158432 TGT-T---TAGAAC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23209 10 -     54323 tgt-t---tagaac
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195484  1 +   9404916 t-------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 412
s Nycticebus_bengalensis.LG01                             93632542 13 + 196305487 TTT-TCTTTCGATT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1931 13 +      2758 TTT-TCTTTCGATT
i Nycticebus_coucang.k141_8166032                        I 7 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560796 13 - 199412804 TTT-TCTTTTGATT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1448676  1 +   2017862 t-------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 415
s Orycteropus_afer.OryAfe_flattened_line_171931              10977  1 -     14239 T-------------
i Orycteropus_afer.OryAfe_flattened_line_171931          I 392 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36523  1 +    559221 t-------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 412
s Otolemur_crassicaudatus.k141_649260                        36383 13 -     51505 TTT-TCTTTTGATT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             349397 13 +   1103335 ttt-tcttttgatt
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1469029 10 - 189151597 TGT-T---TTGAAC
i Pan_troglodytes.CM009242.2                             C 0 I 71
s Panthera_onca.PanOnc_flattened_line_3271                   21217  1 -    230217 t-------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 634
s Panthera_pardus.KV860321.1                              18458543  1 -  18783137 t-------------
i Panthera_pardus.KV860321.1                             C 0 I 634
s Panthera_tigris.KE722367.1                               3969268  1 +   8748460 t-------------
i Panthera_tigris.KE722367.1                             C 0 I 629
s Papio_anubis.CM001495.2                                   240413 10 - 183742232 TGT-T---TTGAAC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6877 10 +     21308 TGT-T---TTGAAC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287916 10 -  20919399 TGT-T---TTGAAC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19532 10 -     27687 TGT-T---TTGAAC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12668 10 +     16796 TGT-T---TTGAAC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19478 10 -     23640 TGT-T---TTGAAC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12126  1 +     78924 t-------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 383
s Perodicticus_ibeanus.k141_1921260                          22641  9 +     31479 TTT-TCT----ATT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            15011  9 -     24908 TTT-TCT----ATT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2495623                            6332 10 +      7560 tgt-t---ttgaac
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62040 10 -     63152 TGT-T---TTGAAC
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44639 10 +     45295 tgt-t---ttgaac
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2317 10 +      5735 TGT-T---TTGAAC
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62466 10 +    207309 TGT-T---TTTCAC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3586 10 -     25401 TGT-T---TTTCAC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29301 10 +     58159 TGT-T---TTTCAC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29577 10 +     63561 TGT-T---TTTCAC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29340 10 +     51148 TGT-T---TTTCAC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554333 10 -   4542175 TGT-T---TTTCAC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29324 10 +     51125 TGT-T---TTTCAC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5755 10 +     39866 TGT-T---TTTAAC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           843 10 -      9282 TGT-T---TTTAAC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40244 10 -     87950 TGT-T---TTTAAC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40637 10 -     88961 TGT-T---TTTAAC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5336 10 -     39403 TGT-T---TTTAAC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40290 10 +     87928 TGT-T---TTTAAC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5333 10 -     60166 TGT-T---TTTAAC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12269 10 -     67232 TGT-T---TTTAAC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40185 10 -     90634 TGT-T---TTTAAC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41653 10 +     89403 TGT-T---TTTAAC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174656 10 - 189387572 TGT-T---TTGAAC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189654 10 -   9816681 TGT-T---TTGAAC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24814 10 +     69807 TGT-T---TTGAAC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42009 10 -     80239 tgt-t---ttgaac
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563635 11 -   2598838 tttct---ttcaat
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1271 11 -      7103 tttct---ttcaat
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1868 11 -     11706 tttct---ttcaat
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5604 11 -     30655 tttct---ttcaat
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31929 11 +     46564 tttct---ttcaat
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92200 11 -     98465 tttct---ttcaat
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5837 11 +     35169 tttct---ttcaat
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          1729  1 -     18639 t-------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 418
s Puma_concolor.QAVW01001104.1                            18096094  1 +  38429054 t-------------
i Puma_concolor.QAVW01001104.1                           C 0 I 403
s Pygathrix_cinerea.k141_1153803                             24205 10 +     91421 TGT-T---TTGAAC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150698 10 -   7812017 TGT-T---TTGAAC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5075 10 +     72585 tgt-t---ttgaac
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26035 10 +     27361 tgt-t---ttgaac
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119383 10 + 195417433 TGT-T---TTGAAC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233643 10 -   7961872 tgt-t---ttgaac
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               1429 10 +     27962 TGT-T---TTTAAC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1439 10 +      6077 TGT-T---TTTAAC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1457 10 +      5971 TGT-T---TTTAAG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1512 10 +      5932 TGT-T---TTTAAG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1656 10 -      2099 TGT-T---TTTAAG
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388777 10 - 209938924 TGT-T---TTTAAC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1459 10 +      5979 TGT-T---TTTAAG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1826 10 -      4301 TGT-T---TTTAAC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235910 10 +   5703754 TGT-T---TTTAAC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5500 10 +     21866 TGT-T---TTTAAC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113320  1 +    313613 t-------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 362
s Semnopithecus_entellus.k141_158471                         22522 10 +     27374 TGT-T---TTGAAC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26041 10 +     58920 TGT-T---TTGAAC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12537 10 -     45317 TGT-T---TTGAAC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20195 10 -     42441 TGT-T---TTGAAC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22875 10 -     29113 TGT-T---TTGAAC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25944 10 -     48123 TGT-T---TTGAAC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855996  1 -   1910179 C-------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525              3734  1 -     97271 t-------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 410
s Suricata_suricatta.SurSur_flattened_line_6629             121764  1 +    196729 t-------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 434
s Symphalangus_syndactylus.tarseq_199                       388118 10 +   1523678 TGT-T---TAGAAC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      188382  1 +    199430 t-------------
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 639
s Tapirus_terrestris.TapTer_scaffold_755                    102337  1 -    539355 t-------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 640
s Tarsius_lariang.k141_1780720                                4620 10 +      6850 TTT-T---TGGAAT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4659 10 +     20590 TTT-T---TGGAAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350399 10 - 186847797 TGT-T---TTGAAC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18086 10 +     26378 TGT-T---TTGAAC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30770 10 -     78344 TGT-T---TTGAAC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17407 10 +     25722 TGT-T---TTGAAC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25632 10 -     62838 TGT-T---TTGAAC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25749 10 +     46913 TGT-T---TTGAAC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6557 10 -     28527 TGT-T---TTGAAC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27571 10 -     64340 TGT-T---TTGAAC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25608 10 -     63452 TGT-T---TTGAAC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7051 10 +     22490 TGT-T---TTGAAC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          479 10 -      6147 TGT-T---TTGAAC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7473 10 -     13050 TGT-T---TTGAAC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252712 10 -   6242583 TGT-T---TTGAAC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58443 10 +     59866 TGT-T---TTGAAC
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831204 10 -   4065304 att-c---ttgaat
i Tupaia_chinensis.KB320699.1                            I 11 I 10
s Tupaia_tana.TupTan_flattened_line_394                       5720 10 -     70247 ATT-C---TTGAAT
i Tupaia_tana.TupTan_flattened_line_394                  I 2 I 10
s Uropsilus_gracilis.UroGra_scaffold_7153                   104552  1 -    105689 T-------------
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 352
s Ursus_maritimus.KK499267.1                                178624  1 +   5085361 t-------------
i Ursus_maritimus.KK499267.1                             C 0 I 640
s Varecia_rubra.k141_787544                                  22695 11 -     30710 tttct---ttcaat
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21602 11 -    147434 tttct---ttcaat
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102247  1 -    112863 t-------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 412
s Zalophus_californianus.ZalCal_flattened_line_17732         25897  1 -     86975 t-------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 414
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862241 96 -  20541912 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17402 24 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107724 24 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10395 25 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2569 95 +      5315 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2497 96 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Xerus_inauris.XerIna_scaffold_2302                        163891 7853 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    477245 96 -    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                 285 24 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11221 104 +     22964 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1857704 8282 +   3870691 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    44290 1653 +     77746 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72407 95 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2911041 105 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Pteropus_vampyrus.KN525825.1                             3534959 101 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838398 95 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49427 96 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         242998 1377 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   103336 1393 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    86006 3889 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125012 93 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117167 24 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               379820 726 +   4330536 I
e Myotis_davidii.KB100139.1                                4383992 732 +   6019432 I
e Myotis_brandtii.KE162005.1                               9789596 729 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          35151 1158 +     47283 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176361 96 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182184 96 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       147948 106 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7490501 8115 +  40650429 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                220768 95 -    270270 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59309 129 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1232884 3952 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     376360 8057 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_galeritus.HipGal_scaffold_23202               47009 105 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547693 105 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12575251 710 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                            8256 1887 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          26338 1841 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3804 93 +     19438 I
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    640383 2102 -   1526836 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 38518 1427 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           248 100 -      8242 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    18187 1845 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      12361 1304 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174210 98 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    10482 5196 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1798 71 +     36723 CAATA-ATTTGTGA----AAA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-A-C----T--T--AG-CAACCCA
s Acinonyx_jubatus.LLWD01001279.1                           810236 24 +   1699592 -------------------------------------------------------------------------TGA-TGGT--GCA-GG-C----T--T--AA-GAGCCca
i Acinonyx_jubatus.LLWD01001279.1                        I 403 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412755 24 +  29979442 -------------------------------------------------------------------------tt-atctt--gca-gg-c----t--T--AA-CAACCCA
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 655 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15678  8 -     61208 ------------------------------------------------------------------------------------------------------A-TGACCTA
i Allactaga_bullata.AllBul_scaffold_20030                I 5196 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45082 71 +     53615 caaca-atttgtga----aga----g---ttt--ctatgaagaagAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----t--t--aa-caaccca
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          40904 71 +     44087 caaca-atttgtga----aga----g---ttc--ctatgaagaagAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13610 71 -     21945 caaca-atttgtga----aga----g---ttt--ctatgaagaagAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15286 71 +     32033 caaca-atttgtga----aga----g---ttt--ctatgaagaagAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69793 71 -     84148 CAACA-GTTTGTG-------A----GAAGTTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42022 71 -     78289 CAACA-GTTTGTG-------A----GAAGTTT--CTATGAAGAAGAAA-----GGAGCAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41472 71 +     55831 CAACA-GTTTGTG-------A----GAAGTTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39910 71 -     64179 CAACA-GTTTGTG-------A----GAAGTTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21556 71 -     24835 CAACA-GTTTGTG-------A----GAAGTTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38539 71 +     45454 CAACA-GTTTGTG-------A----GAAGTTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44238 70 +     70886 CAACA-G-TTATG-------A----GAAGTTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6362 71 +     30854 CAACA-GTTTGTG-------A----GAAGTTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30501 71 +     42133 CAACA-GTTTGTG-------A----GAAGTTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174308 24 -    412891 -------------------------------------------------------------------------TTA-ATGT--GTA-GG-C----T--T--AA-CAACTGA
i Anoura_caudifer.AnoCau_scaffold_1412                   I 98 C 0
s Aotus_azarae.k141_118258                                   48319 68 -     65372 CAACA-ATTTGTG-------A----G---TTT--CTATGAAAAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42066 68 +     43593 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670079 68 +   5030052 CAACA-ATTTGTG-------A----G---TTT--ctatgaagaagaaa-----ggaggaggcaaAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21721 68 -     23494 CAACA-ATTTGTG-------A----G---TTT--CTATGAAAAAGAAA-----GGAGGAGGCAAAT-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6857 68 +      8415 CAACA-ATTTGTG-------A----G---TTT--CTATGAAAAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13665  8 -     32367 ------------------------------------------------------------------------------------------------------A-CATCCCC
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 1304 C 0
s Arctocebus_calabarensis.k141_1364444                       17231 64 -     45910 --------TTGTGA----GAA----G---TTT--ATTTGGAG--GACA-----GGAGAAGG----GCCCTCA-ATA-TCTG--ACAG-A-C----A--T--AA-CAACCCA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2593 24 -     15198 -------------------------------------------------------------------------ttg-tttt--gta-gg-c----t--t--ag-cagccca
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 96 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272300 71 +  21539123 CAACA-GTTTGTG-------A----GAAGTTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8467 71 +     48076 CAACA-GTTTGTG-------A----CAAGTTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3604 71 -     28759 CAACA-GTTTGTG-------A----GAAGTTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31157 71 +     44353 CAACA-GTTTGTG-------A----GAAGTTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46528 71 -     71267 CAACA-GTTTGTG-------A----GAAGTTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20587 71 -     33135 CAACA-GTTTGTG-------A----GAAGTTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3763 71 +     11645 cagca-atttgtga----gaa----g---ttc--ctatggag--gatg-----ggagaggg----GTGC-AAGTTG-TCTT--GTGG-G-C----T--T--AA-TGACCCA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3764 71 -     19611 cagca-atttgtga----gaa----g---ttc--ctatggag--gatg-----ggagaggg----GTGC-AAGTTG-TCTT--GCGG-G-C----T--T--AA-TGACCCA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5486 68 +     28062 CAACA-ATTTGTG-------A----G---TTT--CTATGCAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTC--GCAA-G-C----T--T--AA-CAACCCA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40780 68 -     91139 CAACA-ATTTGTG-------A----G---TTT--CTATGCAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTC--GCAA-G-C----T--T--AA-CAACCCA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18306 68 +     95584 CAACA-ATTTGTG-------A----G---TTT--CTATGCAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTC--GCAA-G-C----T--T--AA-CAACCCA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18219 68 +    119600 CAACA-ATTTGTG-------A----G---TTT--CTATGCAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTC--GCAA-G-C----T--T--AA-CAACCCA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7714 68 +     18648 CAACA-ATTTGTG-------A----C---TTT--CTATGAAGAAGAAA-----GGAGGGGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AG-CAACCCA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7387 66 -     13885 CAACA-ATTTGTG-------A----C---TTT--CTATGAAGAAGAAA-----GGAGGG--AAAAG-------CTG-TCTT--GCAA-A-C----T--T--AG-CAACCCA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16075 68 +     17162 CAACA-ATTTGTG-------A----C---TTT--CTATGAAGAAGAAA-----GGAGGGGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AG-CAACCCA
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451030 68 + 189096842 CAACA-ATTTGTG-------A----C---TTT--CTATGAAGAAGAAA-----GGAGGGGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AG-CAACCCA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17323 68 -     18408 CAACA-ATTTGTG-------A----C---TTT--CTATGAAGAAGAAA-----GGAGGGGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AG-CAACCCA
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503026 23 +  60362399 -------------------------------------------------------------------------tt--tctt--gca-gg-c----t--t--aa-caaccca
i CanFam4.chr16                                          I 430 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6662 23 -     23171 -------------------------------------------------------------------------tt--tctt--gca-gg-c----t--t--aa-caaccca
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 436 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220005 23 +   9314153 -------------------------------------------------------------------------tt--TCTT--GCA-GG-C----T--T--AA-CAACCCA
i Canis_lupus_dingo.QKWQ01000480.1                       I 418 C 0
s Canis_lupus_familiaris.chr16                            41613140 23 +  59632846 -------------------------------------------------------------------------TT--TCTT--GCA-GG-C----t--t--aa-caaccca
i Canis_lupus_familiaris.chr16                           I 428 C 0
s Canis_lupus_orion.HG994398.1                            45104721 23 -  63665305 -------------------------------------------------------------------------tt--TCTT--GCA-GG-C----t--t--aa-caaccca
i Canis_lupus_orion.HG994398.1                           I 439 C 0
s Carlito_syrichta.NW_007259797.1                           267938 70 +    496798 CAGCA-ACTTGTGA----GAA----G---TTT--CTATGGAG--GACATTTAGGGACAAAA----G-------TTG-TCGT--GCAG-G-C----T--T--CA-CAACCCA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2664 24 +      5315 -------------------------------------------------------------------------TTA-TTTT--GTA-GG-C----t--t--aa-caaccca
i Carollia_perspicillata.CarPer_scaffold_170178          I 95 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20032  8 -     39886 ------------------------------------------------------------------------------------------------------A-TAACACA
i Castor_canadensis.CasCan_scaffold_39952                I 1845 C 0
s Cavia_aperea.AVPZ01000300.1                              4993592  8 +  23392119 ------------------------------------------------------------------------------------------------------A-CAAgtca
i Cavia_aperea.AVPZ01000300.1                            N 0 C 0
s Cavia_porcellus.DS562891.1                               4997034  8 +  23407841 ------------------------------------------------------------------------------------------------------A-CAAgtca
i Cavia_porcellus.DS562891.1                             N 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60135  8 -     66877 ------------------------------------------------------------------------------------------------------A-CAAGTCA
i Cavia_tschudii.CavTsc_scaffold_23560                   N 0 C 0
s Cebuella_niveiventris.k141_592277                           2609 68 -     12580 CAACA-ATTTGTG-------A----C---TTT--CTATGAAGAAGAAA-----GGAGGGGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AG-CAACCCA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40495 68 +     53515 CAACA-ATTTGTG-------A----C---TTT--CTATGAAGAAGAAA-----GGAGGGGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AG-CAACCCA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368696 70 -  26074798 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-CT--TT--T--AA-CAACCCA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5585 70 -     34880 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-CT--TT--T--AA-CAACCCA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64680 70 -     89041 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-CT--TT--T--AA-CAACCCA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1110 70 -      1636 CAGCA-ACTTGTGA----GAA----G---TTT--CTATGGAG--GACATTTAGGGACAAAA----G-------TTG-TCGT--GCAG-G-C----T--T--AA-CAACCCA
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489769 24 -  27778364 -------------------------------------------------------------------------tta-tctt--gca-gg-t----t--t--aa-caaccca
i Ceratotherium_simum.JH767749.1                         I 420 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16602 24 +     27315 -------------------------------------------------------------------------tta-tctt--gca-gg-t----t--t--aa-caaccca
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 420 C 0
s Cercocebus_atys.KQ010504.1                                138242 71 -   4669795 CAACA-ATTGGTGG----AGA----G---TTT--Ctatgaagaagaaa-----ggaggaggcaaAG-------TTG-TCTG--GCAA-G-C----T--C--AA-CAACCCA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       41982 71 +     47900 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--C--AA-CAACCCA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41815 71 -     44860 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--C--AA-CAACCCA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41798 71 -    148725 CAACA-ATTGGTGG----AGA----G---TTT--TTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--C--AA-CAACCCA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24863 71 -     40656 caaca-atttgtga----aga----g---ttt--ctatgaagaaTAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4799 71 +     20796 caaca-atttgtga----aga----g---ttt--ctatgaagaaTAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9055 71 -     17524 CAACA-ATTTGTGA----AGA----G---TTT--CTATGAAGCAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24744 71 -     34525 CAACA-ATTTGTGC----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAGCTCA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9453 71 -     25376 CAACA-ATTTGTGA----AGA----G---TTT--CTATGAAGAAGAAA-----AGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362019 71 -  39242232 CAACA-ATTTGTGA----AGA----G---TTT--CTATGAAGAATAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267763 71 +  21565898 CAACA-ATTTGTGA----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29221 71 -     45857 CAACA-ATTTGTGA----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25008 71 -     32606 caaca-atttgtga----aga----g---ttt--ctgtgaagaaTAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1194 71 +      8499 caaca-atttgtga----aga----g---ttt--ctatgaagaagAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22713 71 +     70610 CAACA-ATTTGTGA----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19572 71 +     36323 caaca-atttgtga----aga----g---ttt--cTATGAAGCAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10420 20 -     19938 ---------------------------------------------------------------------------T-TCTT--T----G-A----T--T--TCACACACTA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 25 C 0
s Cheirogaleus_major.k141_666340                             28197 71 -     33796 cagca-atttgtga----gag----g---ttc--ctatggag--gacg-----ggagaggg----gctctac-ttg-tctt--gcag-g-c----t--t--ga-cgaccca
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2727 71 -     15404 cagca-atttgtga----gag----g---ttc--ctatggag--gacg-----ggagaggg----gcgCT-ACTTG-TCTT--GCCA-G-C----T--T--AA-CGACCCA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6594 68 -     32913 TAATG-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCACAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17007 68 -     40346 TAATG-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCACAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17271 68 +    216457 TAACG-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCACAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17055 68 +     39636 TAATG-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCACAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1441 68 +      5346 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GATGGGGGCAAAG-------TTG-TCTT--GCAA-A-C----T--T--TA-CAACCCA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40126 68 -    112038 CAACA-ATTTGTG-------A----G---TTT--CTATGCAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTC--GCAA-G-C----T--T--AA-CAACCCA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5698 68 +     34062 CAACA-ATTTGTG-------A----G---TTT--CTATGCAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTC--GCAA-G-C----T--T--AA-CAACCCA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340469 71 +  18827391 CAACA-ATTTGTGA----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCTA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7080 71 -     44032 caaca-atttgtga----aga----g---ttt--ctatgaagaagAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301794 71 - 135778131 CAACA-ATTTGTGA----AGA----G---TTT--Ctatgaagaagaaa-----ggaggaggcaaAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCTA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406348 71 -   2368649 CAACA-ATTTGTGA----AGA----G---TTT--CTacgaagaagaaa-----ggaggaggcaaAG-------TTG-TCCG--GCAA-G-C----T--T--CA-CAACCCA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375511 59 - 200372422 caaca-atttgtga----aga----g---ttt--ctatgaagaagAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G----------------------
i Colobus_guereza.LG01                                   C 0 I 726
s Colobus_polykomos.k141_1559707                              6237 71 -      6605 caaca-atttgtga----aga----g---ttt--cTACGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--CA-CAACCCA
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804929 12 +  53390261 ------------------------------------------------------------------------------------------C----T--T--AC-TAACCCA
i Condylura_cristata.JH655891.1                          I 345 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           348 24 -      8242 -------------------------------------------------------------------------TTA-TCTT--GCA-GG-C----t--t--aa-caaccca
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 100 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 39945  8 -     83289 ------------------------------------------------------------------------------------------------------G-CAACCCT
i Cricetomys_gambianus.CriGam_scaffold_14425             I 1427 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1525 24 +     87169 -------------------------------------------------------------------------TTA-TTTT--GCA-GG-A----T--T--AC-CAGCCCC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 458 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642485  8 -   1526836 ------------------------------------------------------------------------------------------------------G-CAATTCA
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 2102 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2564  8 +     50838 ------------------------------------------------------------------------------------------------------A-CAAGTCA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              N 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1216  8 +     36344 ------------------------------------------------------------------------------------------------------A-CAAGTGA
i Cuniculus_paca.CunPac_flattened_line_7025              N 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2107748 21 -   2246927 ---------------------------------------------------------------------------T-TCTT--GCA--G-A----T--T--TCACACACT-
i Dasypus_novemcinctus.JH564415.1                        I 24 C 0
s Desmodus_rotundus.KZ672289.1                            11862337 24 -  20541912 -------------------------------------------------------------------------tta-tttt--gca-gg-c----t--t--aa-caaccca
i Desmodus_rotundus.KZ672289.1                           I 96 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662061 24 -   1390856 -------------------------------------------------------------------------tta-tctt--gca-gg-t----t--T--AA-CGACCca
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 428 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136846 24 -    198055 -------------------------------------------------------------------------tta-tctt--gca-gg-t----t--T--AA-CGACCca
i Diceros_bicornis.DicBicMic_scaffold_5955               I 420 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    95948  8 -    115145 ------------------------------------------------------------------------------------------------------A-CAAGCCA
i Dinomys_branickii.DinBra_scaffold_10381                N 0 C 0
s Dipodomys_ordii.KN672350.1                              18948149  8 -  37912305 ------------------------------------------------------------------------------------------------------A-CAGCCCA
i Dipodomys_ordii.KN672350.1                             N 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3096  8 -     10735 ------------------------------------------------------------------------------------------------------A-CAGCCCA
i Dipodomys_stephensi.DipSte_scaffold_89095              N 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7533  8 +     14636 ------------------------------------------------------------------------------------------------------A-CAAGTCA
i Dolichotis_patagonum.DolPat_scaffold_80628             N 0 C 0
s Echinops_telfairi.JH980293.1                            62851270 16 - 111700974 --------------------------------------------------------------------------TG-TCTC--TTG--G-G----CTTC--A---------
i Echinops_telfairi.JH980293.1                           C 0 I 7
s Eidolon_helvum.AWHC01266696.1                               3897 24 +     19438 -------------------------------------------------------------------------tta-tctt--aca-gg-c----t--t--aa-taaccca
i Eidolon_helvum.AWHC01266696.1                          I 93 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28179  7 +    110024 ------------------------------------------------------------------------------------------------------A-CAACCC-
i Ellobius_lutescens.LOEQ01008920.1                      I 1841 C 0
s Ellobius_talpinus.LOJH01026522.1                           10143  7 +     18970 ------------------------------------------------------------------------------------------------------A-CAACCC-
i Ellobius_talpinus.LOJH01026522.1                       I 1887 C 0
s Enhydra_lutris.KZ291758.1                               24913557 24 +  41312741 -------------------------------------------------------------------------tt-atctt--gca-gg-c----t--T--AA-TAACCCA
i Enhydra_lutris.KZ291758.1                              I 418 C 0
s Eptesicus_fuscus.JH977646.1                             12575961 24 +  14770903 -------------------------------------------------------------------------TTA-TTTT--GCA-GG-C----A--T--Aa-caatcca
i Eptesicus_fuscus.JH977646.1                            I 710 C 0
s Equus_asinus.JREZ01000139.1                              3039043 24 -   4378816 -------------------------------------------------------------------------TTA-TCTC--ACA-CA-C----T--T--AA-CAACCCC
i Equus_asinus.JREZ01000139.1                            I 428 C 0
s Equus_caballus.CM000403.2                               21372977 24 +  39960074 -------------------------------------------------------------------------TTA-TCTC--ACA-CA-C----T--T--AA-CAACCCC
i Equus_caballus.CM000403.2                              I 428 C 0
s Equus_przewalskii.KK951119.1                              409763 24 -    498745 -------------------------------------------------------------------------TTA-TCTC--ACA-CA-C----T--T--AA-CAACCCC
i Equus_przewalskii.KK951119.1                           I 428 C 0
s Daubentonia_madagascariensis.ctg71                        290207 39 +  12879189 cagta-atttgtgg----gaa----g---tgg--ctgtggag--gacg-----ggagagg---------------------------------------------------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                               260025 71 +  21539334 CAACA-ATTTGTGA----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243901 24 - 206538554 -------------------------------------------------------------------------TTA-TGGT--GCA-GG-C----T--T--AA-GAGCCCA
i Felis_catus.CM001381.2                                 I 403 C 0
s Felis_catus_fca126.CM031415.1                          185113683 24 - 205367284 -------------------------------------------------------------------------TTA-TGGT--GCA-GG-C----T--T--AA-GAGCCCA
i Felis_catus_fca126.CM031415.1                          I 403 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25031 24 -     30238 -------------------------------------------------------------------------TTA-CGGT--GCA-GG-C----T--T--AA-GAGCCCA
i Felis_nigripes.FelNig_flattened_line_31944             I 403 C 0
s Galago_moholi.ctg3793                                     121271 64 -    137831 --------TTGTGG----GAA----G---TTT--CTATGGAG--GACA-----AGAGAAGG----GCCCTCA-ATG-TCTG--ACAG-A-C----A--T--AA-CAACCCA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4812 64 +     22493 --------TTGTGG----GAA----G---TTT--CTATGGAG--GACA-----AGAGAAGG----GCCCTCA-ATG-TCTG--ACAG-A-C----A--T--AA-CAACCCA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16867 64 -     32986 --------TTGTGG----AAA----G---TTT--CTATGGAG--GATG-----GGAGAAGG----GCCCTCA-ATG-TCTG--ACAG-A-C----A--T--AA-CAACGCA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16612 71 +     18121 CAGCA-ATTTGTGG----GAA----G---TTC--TTATGGAG--GACA-----GGAGAGAG----GCC-AAAGTTG-TCTT--GAAG-G-C----t--t--aa-caaccta
i Galeopterus_variegatus.GalVar_scaffold_74466           I 16 C 0
s Gorilla_beringei.k141_3358147                               2160 71 -      8343 caata-atttgtga----aaa----g---ttt--ctgtgaagaagAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-A-C----T--T--AG-CAACCCA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251650 71 - 186649187 CAATA-ATTTGTGA----AAA----G---TTT--Ctatgaagaagaaa-----ggagaaggcaAAG-------TTG-TCTT--GCAA-A-C----T--T--AG-CAACCCA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28034 24 -    327341 -------------------------------------------------------------------------TTA-CTTT--GCA-GG-A----T--G--AC-CAGCCCC
i Helogale_parvula.HelPar_flattened_line_2585            I 429 C 0
s Heterocephalus_glaber.JH602082.1                         1924661  5 -  22651954 ----------------------------------------------------------------------------------------------------------AGCCA
i Heterocephalus_glaber.JH602082.1                       N 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547798 24 -   1711038 -------------------------------------------------------------------------tta-tctt--gca-gg-c----t--t--aa-caaccaa
i Hipposideros_armiger.JXIK01000431.1                    I 105 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47114 24 +     49977 -------------------------------------------------------------------------tta-tctt--gca-gg-c----t--t--aa-caaccca
i Hipposideros_galeritus.HipGal_scaffold_23202           I 105 C 0
s Hoolock_leuconedys.ctg274                                    139918 70 -    630532 CAACA-ATTTGTGA----AAA----G---TTT--CTGTGAAGAA-AAA-----GGAGGAGACAAAG-------TTG-TCTT--GCAA-G-T----T--T--AA-CAACCCA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66511 24 +     83186 -------------------------------------------------------------------------TTA-TCTT--GTA-GG-C----T--T--AA-CAGCACA
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 450 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68885  8 +    143317 ------------------------------------------------------------------------------------------------------A-CAAGCCA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        N 0 C 0
s Hylobates_agilis.k141_1155965                               2580 68 +     12352 CAACA-ATTTGTG-------A----G---TTT--CTGTGAAGAAGAAA-----GGAGGAGACTAAG-------TTG-TCTG--GCAA-G-T----T--T--AA-CAACCCA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9763 68 +     55766 CAACA-ATTTGTG-------A----G---TTT--CTGTGAAGAAGAAA-----GGAGGAGACTAAG-------TTG-TCTG--GCAA-G-T----T--T--AA-CAACCCA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2049102 71 + 191637585 caaca-atttgtga----aaa----g---ttt--ctgtgaagaagAAA-----GGAGGAGACAAAG-------TTG-TCTT--GCAA-G-T----T--T--AA-CAACCCA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798434 71 +  11177569 CAACA-ATTTGTGA----AAA----G---TTT--CTGTGAAGAAGAAA-----GGAGGAGACAAAG-------TTG-TCTT--GCAA-G-T----T--T--AA-CAACCCA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384417  8 +   7955117 ------------------------------------------------------------------------------------------------------A-CAACCCC
i Ictidomys_tridecemlineatus.JH393364.1                  I 8057 C 0
s Indri_indri.k141_4600452                                    1261 71 -      1527 cagca-atttgtga----gaa----g---ttc--ctatggag--gaca-----ggagaggg----GTGC-AAGTTG-TCTT--GCAG-G-C----T--T--AA-TGACCCA
i Indri_indri.k141_4600452                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1236836  8 +   9596543 ------------------------------------------------------------------------------------------------------A-TGACCTA
i Jaculus_jaculus.JH725527.1                             I 3952 C 0
s Lagothrix_lagothricha.k141_246028                          40845 69 +    110728 CAAC---TTTGTG-------A----GAAATTT--GTATGAAGAGGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GTAA-G-C----T--T--AA-CAACCCA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59438 24 -     65777 -------------------------------------------------------------------------TTA-TTTT--GCA-GG-C----A--T--Aa-cactcca
i Lasiurus_borealis.LasBor_scaffold_16567                I 129 C 0
s Leontocebus_fuscicollis.k141_2994775                        1527 67 -     13097 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GT-GGGGGGGAAG-------TTG-TCTT--GCAA-A-C----T--T--AA-CAACCCA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1478 67 +      5940 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GT-GGGGGGGAAG-------TTG-TCTT--GCAA-A-C----T--T--AA-CAACCCA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1109 67 -      5717 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GT-GGGGGGGAAG-------TTG-TCTT--GCAA-A-C----T--T--AA-CAACCCA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7744 65 -     11567 CAACA-ATGTATG-------A----C---TTT--CTA---AGAAGAAA-----GGAGGGGACAAAG-------TTG-TCTT--GCAA-G-C----T--T--AC-CAACCCA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9125 65 -     12945 CAACA-ATGTATG-------A----C---TTT--CTA---AGAAGAAA-----GGAGGGGACAAAG-------TTG-TCTT--GCAA-G-C----T--T--AC-CAACCCA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6553 71 +     29618 cagca-atttgtga----gaa----g---ttc--ctacggag--gacg-----ggagaggg----gcgctag-ttg-tctt--gcag-g-c----t--t--aa-tgaccca
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6550 71 +     31569 cggca-atttgtga----gaa----g---ttc--ctacggag--gacg-----ggagaggg----gcgctag-ttg-tctt--gcag-g-c----t--t--aa-tgaccca
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6560 71 +     24756 cagca-atttgtga----gaa----g---ttc--ctacggag--gacg-----ggagaggg----gcgctag-ttg-tctt--gcag-g-c----t--t--aa-tgaccca
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6554 71 +     16388 cagca-atttgtga----gaa----g---ttc--ctacggag--gacg-----ggagaggg----gcgctag-ttg-tctt--gcag-g-c----t--t--aa-tgaccca
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810907 24 -   3914936 -------------------------------------------------------------------------ac-atctt--gca-gg-c----t--t--aa-caaccca
i Leptonychotes_weddellii.KB714746.1                     I 412 C 0
s Lycaon_pictus.CM007581.1                                41612295 23 +  59628241 -------------------------------------------------------------------------TT--TCTT--GCA-GG-C----t--t--aa-caaccca
i Lycaon_pictus.CM007581.1                               I 428 C 0
s Lophocebus_aterrimus.ctg367                               330195 47 -   1826925 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG---------------------------------------------
i Lophocebus_aterrimus.ctg367                            C 0 I 24
s Loris_lydekkerianus.k141_2031736                            7272 34 +     19643 --------TTGTGA----GAA----G---TTT--CTATGGAG--AACA-----GGAGAAGG----G---------------------------------------------
i Loris_lydekkerianus.k141_2031736                       C 0 I 22
s Loris_tardigradus.ctg83                                  5040932 34 -   6120653 --------TTGTGA----GAA----G---TTT--CTATGGAG--AACA-----GGAGAAGG----G---------------------------------------------
i Loris_tardigradus.ctg83                                C 0 I 22
s Macaca_arctoides.k141_1757516                              42479 71 -     61512 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370107 71 -  60120075 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22428 71 +     30207 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19531 71 -     24934 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22314 71 +     30527 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33504 71 -     50087 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43242 71 +     51645 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411816 71 - 187317192 CAACA-ATTGGTGG----AGA----G---TTT--Ctatgaagaagaaa-----ggaggaggcaaAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396699 71 +  25927173 CAACA-ATTGGTGG----AGA----G---TTT--Ctatgaagaagaaa-----ggaggaggcaaAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45830 71 -     62418 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22518 71 +     24253 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42273 71 +     59329 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-AAACCCA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268107 71 +    668171 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Macaca_silenus.Contig273                               C 0 I 132
s Macaca_thibetana.k99_41370                                 19453 71 +     21031 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               33186 71 +     33478 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220863 24 -    270270 -------------------------------------------------------------------------TTA-TCTT--ACA-GG-C----T--T--AA-TAACCca
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 95 C 0
s Mandrillus_leucophaeus.scaffold280                        319583 71 +  24302211 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--C--AA-CAACCCA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354415 71 -    752769 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--C--AA-CAACCCA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671142 24 -    737560 -------------------------------------------------------------------------TTA-TCTT--GCA-GA-T----T--T--AA-TAACCca
i Manis_javanica.JSZB01003497.1                          I 429 C 0
s Manis_pentadactyla.KN006162.1                             218433 24 +    317179 -------------------------------------------------------------------------TTA-TCTT--GCA-GA-T----t--t--aa-taaccca
i Manis_pentadactyla.KN006162.1                          I 429 C 0
s Marmota_marmota.CZRN01000018.1                           7498616  8 +  40650429 ------------------------------------------------------------------------------------------------------A-CAACCCC
i Marmota_marmota.CZRN01000018.1                         I 8115 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148054 24 +    207569 -------------------------------------------------------------------------tta-tctt--tca-gg-c----t--T--AA-CAACCTA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 106 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23430 24 -     74585 -------------------------------------------------------------------------TT-ATCTT--GCA-GG-C----T--T--AA-TAACCCA
i Mellivora_capensis.MelCap_flattened_line_19308         I 422 C 0
s Mico_argentatus.k141_582562                                 7486 68 +     17804 CAACA-ATTTGTG-------A----C---TTT--CTATGAAGAAGAAA-----GGAGGGGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AG-CAACCCA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8270 68 -     12984 CAACA-ATTTGTG-------A----C---TTT--CTATGAAGAAGAAA-----GGAGGGGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AG-CAACCCA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16221 68 -     26561 CAACA-ATTTGTG-------A----C---TTT--CTATGAAGAAGAAA-----GGAGGGGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AG-CAACCCA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982165 71 +  93316391 CAGCA-ATTTGTGA----GAC----A---TTC--CTATGGAG--GACA-----GGCGAGGG----GC-ATGAGTTG-TCTT--GCAG-G-C----T--T--AA-TGACCCA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41589 16 +    145209 --------------------------------------------------------------------------TG-TCTT--TTG--G-G----CTTC--A---------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 7
s Micronycteris_hirsuta.MicHir_scaffold_2233                182280 24 +    200668 -------------------------------------------------------------------------TTA-TTTT--GCA-GA-C----T--T--AA-CAACCCG
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 96 C 0
s Miopithecus_ogouensis.k141_1534655                         19577 71 -     27822 caaca-atttgtga----agg----g---ttt--ctatgaagaagAAA-----GGAGGAGGCAAAG-------TTA-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5917 24 +     27589 -------------------------------------------------------------------------AT-ATCTT--GCA-GG-C----t--t--aa-caaccca
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 413 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176457 24 +    366855 -------------------------------------------------------------------------TTA-TTTT--GCA-GG-C----T--T--AA-CCACCCA
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 96 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15788 24 -     63510 -------------------------------------------------------------------------TTA-CTTT--GCA-GG-A----T--G--AC-CAGCCCC
i Mungos_mungo.MunMun_flattened_line_18455               I 429 C 0
s Murina_feae.MurFea_scaffold_17764                          36309 24 +     47283 -------------------------------------------------------------------------TTA-TTTT--GCA-GG-C----A--T--Aa-caatcca
i Murina_feae.MurFea_scaffold_17764                      I 1158 C 0
s Mustela_putorius.JH418006.1                             14352370 24 +  14710649 -------------------------------------------------------------------------tt-atctt--gca-gg-c----t--T--AA-TAACCCA
i Mustela_putorius.JH418006.1                            I 427 C 0
s Myotis_brandtii.KE162005.1                               9790325 24 +  10118263 -------------------------------------------------------------------------tta-tttt--gca-gg-c----a--t--aa-caatcca
i Myotis_brandtii.KE162005.1                             I 729 C 0
s Myotis_davidii.KB100139.1                                4384724 24 +   6019432 -------------------------------------------------------------------------tta-tttt--gca-gg-c----a--t--aa-taatcca
i Myotis_davidii.KB100139.1                              I 732 C 0
s Myotis_lucifugus.GL429869.1                               380546 24 +   4330536 -------------------------------------------------------------------------tta-tttt--gca-gg-c----a--t--aa-caatcca
i Myotis_lucifugus.GL429869.1                            I 726 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117191 20 +    130748 ---------------------------------------------------------------------------T-TCTT----A--T-G----T--T--CCATACTCGA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 24 C 0
s Mirza_zaza.k141_766280                                     50023 41 -     62432 caaca-atttgtga----gaa----g---ttc--ctctggag--gaca-----ggagaggg----g---------------------------------------------
i Mirza_zaza.k141_766280                                 C 0 I 3
s Nasalis_larvatus.k141_1350636                              26191 71 +     34575 caaca-atttgtga----aga----g---ttt--ctatgaagaagAAA-----GGAGGAGGCACAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466304 24 -  31847680 -------------------------------------------------------------------------at-atctt--gca-gg-c----t--t--aa-caaccca
i Neomonachus_schauinslandi.NINY01007730.1               I 414 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125105 24 -    149072 -------------------------------------------------------------------------TTA-TTTT--GTA-GG-C----T--T--AA-CAACCCA
i Noctilio_leporinus.NocLep_scaffold_7894                I 93 C 0
s Nomascus_annamensis.k141_1771965                           50841 71 -    132029 CAACA-ATTTGTGA----AAA----G---TTT--CTGTGAAGAAGAAA-----GGAGGAGACAAAG-------TTG-TCTT--GCAA-G-T----T--T--AA-CAACCCA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               6936 71 -     16345 caaca-atttgtga----aaa----g---ttt--ctgtgaagaagAAA-----GGAGGAGACAAAG-------TTG-TCTT--GCAA-G-T----T--T--AA-CAACCCA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12821 71 +     22201 caaca-atttgtga----aaa----g---ttt--ctgtgaagaagAAA-----GGAGGAGACAAAG-------TTG-TCTT--GCAA-G-T----T--T--AA-CAACCCA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411156 71 -  22158432 CAACA-ATTTGTGA----AAA----G---TTT--CTGTGAAGAAGAAA-----GGAGGAGACAAAG-------TTG-TCTT--GCAA-G-T----T--T--AA-CAACCCA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23219 71 -     54323 caaca-atttgtga----aaa----g---ttt--ctgtgaagaagAAA-----GGAGGAGACAAAG-------TTG-TCTT--GCAA-G-T----T--T--AA-CAACCCA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195897 23 +   9404916 -------------------------------------------------------------------------TT--TCTT--GCA-GG-C----t--t--aa-caaccca
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 412 C 0
s Nycticebus_bengalensis.LG01                             93632555 64 + 196305487 --------TTGTGA----GAA----G---TTT--CTATGGAG--AACA-----GGATAAGG----GCTCTTG-ATG-TCTG--ACAG-A-C----A--C--AA-CAACCCA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             1944 64 +      2758 --------TTGTGA----GAA----G---TTT--CTATGGAG--AACA-----GGATAAGG----GCTCTTG-ATG-TCTG--ACAG-A-C----A--C--AA-CAACCCA
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560809 64 - 199412804 --------TTGTGA----GAA----G---TTT--CTATGGAG--AACA-----GGATAAGG----GCTCTTG-ATG-TCTG--ACAG-A-C----A--T--AA-CAACCCA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11044918  8 -  11899542 ------------------------------------------------------------------------------------------------------A-CAAGTCA
i Octodon_degus.JH651603.1                               N 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449092 24 +   2017862 -------------------------------------------------------------------------at-atctt--gca-gg-c----t--t--aa-caaccca
i Odobenus_rosmarus.KB229312.1                           I 415 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    89895  7 -    140218 ------------------------------------------------------------------------------------------------------A-CAACCC-
i Ondatra_zibethicus.OndZib_scaffold_7387                I 3889 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104729  7 +    107918 ------------------------------------------------------------------------------------------------------A-CAACCC-
i Onychomys_torridus.OnyTor_scaffold_2487                I 1393 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              10978 16 -     14239 --------------------------------------------------------------------------TG-TCTT--TCA--G-G----gttc--a---------
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 7
s Otocyon_megalotis.JAEUCK010005147.1                        36936 23 +    559221 -------------------------------------------------------------------------TT--TCTT--GCA-GG-C----t--t--aa-caaccca
i Otocyon_megalotis.JAEUCK010005147.1                    I 412 C 0
s Otolemur_crassicaudatus.k141_649260                        36396 64 -     51505 --------TTGTGG----GAA----G---TTT--CTATGGAG--GACG-----GGAGAAGG----GCCCTCA-ATG-TCAG--ACAG-A-C----A--T--AA-CAACCCA
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             349410 64 +   1103335 --------ttgtgg----GAA----G---TTT--CTATGGAG--GACG-----GGAGAAGG----GCCCTCA-ATG-TCAG--ACAG-A-C----A--T--AA-CAACCCC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.NBAG03003182.1                              8567 74 -     24457 CAATA-ATTTGTGA----AAA----G---TTTTCCtatgaagaagaa------ggaggaggcaaAG-------TTG-TCTT--GCAA-a-a----c--ttaag-caaccca
i Pan_troglodytes.NBAG03003182.1                         n 71 I 140
s Panthera_onca.PanOnc_flattened_line_3271                   21852 24 -    230217 -------------------------------------------------------------------------TTA-TGGT--GCA-GG-C----T--T--AA-GAGCCca
i Panthera_onca.PanOnc_flattened_line_3271               I 634 C 0
s Panthera_pardus.KV860321.1                              18459178 24 -  18783137 -------------------------------------------------------------------------TTA-TGGT--GCA-GG-C----T--T--AA-GAGCCca
i Panthera_pardus.KV860321.1                             I 634 C 0
s Panthera_tigris.KE722367.1                               3969898 24 +   8748460 -------------------------------------------------------------------------TTA-TGGT--GCA-GG-C----T--T--AA-GAGCCca
i Panthera_tigris.KE722367.1                             I 629 C 0
s Papio_anubis.CM001495.2                                   240423 71 - 183742232 CAACA-ATTGGTGG----AGA----G---TTT--Ctatgaagaagaaa-----ggaggaggcaaAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6887 71 +     21308 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287926 71 -  20919399 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19542 71 -     27687 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GAAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12678 71 +     16796 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19488 71 -     23640 CAACA-ATTGGTGG----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12510 24 +     78924 -------------------------------------------------------------------------TTA-TCTT--GCA-GG-C----T--T--AA-CAGCCCA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 383 C 0
s Perodicticus_ibeanus.k141_1921260                          22650 64 +     31479 --------TTGTGA----GAA----G---TTT--CTATGGAG--GACG-----GGAGAAGG----GCCCTCA-ATG-TCTG--ACAG-A-T----A--T--AA-CAACCCA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            15020 64 -     24908 --------TTGTGA----GAA----G---TTT--CTATGGAG--GACG-----GGAGAAGG----GCCCTCA-ATG-TCTG--ACAG-A-T----A--T--AA-CAACCCA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37346  8 +     38305 ------------------------------------------------------------------------------------------------------A-CAACCCA
i Perognathus_longimembris.PerPac_flattened_line_28053   N 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244375  7 +  18517816 ------------------------------------------------------------------------------------------------------A-CAACTC-
i Peromyscus_maniculatus.KI615324.1                      I 1377 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29601  5 -     56120 ----------------------------------------------------------------------------------------------------------AGCCG
i Petromus_typicus.PetTyp_scaffold_17301                 N 0 C 0
s Piliocolobus_badius.k141_2495623                            6342 71 +      7560 caaca-atttgtga----aga----g---ttt--ctatgaagaagAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62050 71 -     63152 CAACA-ATTTGTGA----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CGACCCA
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44649 71 +     45295 caaca-atttgtga----aga----g---ttt--ctatgaagaagAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CGACCCA
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2327 71 +      5735 CAACA-ATTTGTGA----AGA----G---TTT--Ctatgaagaagaaa-----ggaggaggcaaAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CGACCCA
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              484 24 +     22231 -------------------------------------------------------------------------TTA-TTTA--GCA-GA-C----A--T--Aa-caatcca
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        N 0 C 0
s Pithecia_albicans.k141_1239476                             62476 68 +    207309 CAACA-ATTTGTG-------A----G---TTT--CTATGCAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTC--GCAA-G-C----T--T--AG-CAACCCA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3596 68 -     25401 CAACG-ATTTGTG-------A----G---TTT--CTATGCAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTC--GCAA-G-C----T--T--AG-CAACCCA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29311 68 +     58159 CAACA-ATTTGTG-------A----G---TTT--CTATGCAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTC--GCAA-G-C----T--T--AG-CAACCCA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29587 68 +     63561 CAACA-ATTTGTG-------A----G---TTT--CTATGCAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTC--GCAA-G-C----T--T--AG-CAACCCA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29350 68 +     51148 CAACA-ATTTGTG-------A----G---TTT--CTATGCAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTC--GCAA-G-C----T--T--AG-CAACCCA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554343 68 -   4542175 CAACA-ATTTGTG-------A----G---TTT--CTATGCAGAAGAAA-----GGAGGAGGCAAAG-------TTA-TCTC--GCAA-G-C----T--T--AG-CAACCCA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29334 68 +     51125 CAACA-ATTTGTG-------A----G---TTT--CTATGCAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTC--GCAA-G-C----T--T--AG-CAACCCA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5765 68 +     39866 CAACG-ATTTGCG-------A----G---TTT--CTGTGAAGAAAAAA-----GGAGGAGGCACAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           853 65 -      9282 CAACG-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCACAG-------TT----TT--GCAA-G-C----T--T--AA-CAACCCA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40254 68 -     87950 CAACA-ATTTGTG-------A----G---TTT--CTGTGAAGAAGAAA-----GGAGGAGGCACAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40647 68 -     88961 CAACG-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCACAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5346 68 -     39403 CAACG-ATTTGTG-------A----G---TTT--CTGTGAAGAAGAAA-----GGAGGAGGCACAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40300 68 +     87928 CAACG-ATTTGTG-------A----G---TTT--CTGTGAAGAAGAAA-----GGAGGAGGCACAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5343 68 -     60166 CAACG-ATTTGCG-------A----G---TTT--CTGTGAAGAAAAAA-----GGAGGAGGCACAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12279 68 -     67232 CAACG-ATTTGCG-------A----G---TTT--CTGTGAAGAAAAAA-----GGAGGAGGCACAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40195 68 -     90634 CAACG-ATTTGCG-------A----G---TTT--CTGTGAAGAAAAAA-----GGAGGAGGCACAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41663 68 +     89403 CAACG-ATTTGCG-------A----G---TTT--CTGTGAAGAAAAAA-----GGAGGAGGCACAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174666 71 - 189387572 CAACA-ATTTGTGA----AAA----C---TTT--ctatgaagaagaaa-----ggaagaggcaaAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189664 71 -   9816681 CAACA-ATTTGTGA----AAA----C---TTT--CTATGAAGAAGAAA-----GGAAGAGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24824 71 +     69807 CAACA-ATTTGTGA----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42019 71 -     80239 caaca-atttgtga----aga----g---ttt--ctatgaagaagAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563646 71 -   2598838 CAGCA-ATTTGTGA----GAA----G---TTC--CTATGGAG--GACG-----GGAGAGGG----GTGC-AAGTTG-TCTT--GCAG-G-C----T--C--AA-TGACCCG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1282 71 -      7103 cagca-atttgtga----gaa----g---ttc--ctatggag--gacg-----ggagaggg----GTGC-AAGTTG-TCTT--GCAG-G-C----T--C--AA-TGACCCG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1879 71 -     11706 cagca-atttgtga----gaa----g---ttc--ctatggag--gacg-----ggagaggg----GTGC-AAGTTG-TCTT--GCAG-G-C----T--C--AA-TGACCCA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5615 71 -     30655 cagca-atttgtga----gaa----g---ttc--ctatggtg--gatg-----ggagaggg----GTGC-AAGTTG-TCTT--GCAG-G-C----T--C--AA-TGACCCA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          31940 71 +     46564 cagca-atttgtga----gaa----g---ttc--ctatggag--gacg-----ggagaggg----GTGC-AAGTTG-TCTT--GCAG-G-C----T--C--AA-TGACCCA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92211 71 -     98465 cagca-atttgtga----gaa----g---ttc--ctatggag--gacg-----ggagaggg----GTGC-AAGTTG-TCTT--GCAG-G-C----T--C--AA-TGACCCG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5848 71 +     35169 cagca-atttgtga----gaa----g---ttc--ctatggag--gacg-----ggagaggg----GTGC-AAGTTG-TCTT--GCAG-G-C----T--C--AA-TGACCCG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49523 24 -     66298 -------------------------------------------------------------------------tta-tttt--gca-gg-c----t--T--AC-CAGCCCA
i Pteronotus_parnellii.KE847780.1                        I 96 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2148 24 -     18639 -------------------------------------------------------------------------TT-ATCTT--GCA-GG-C----T--T--AA-TAACCCA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 418 C 0
s Pteropus_alecto.KB030862.1                               5838493 24 -  28871421 -------------------------------------------------------------------------tta-ttgt--aca-gg-c----t--T--AA-TAACCCA
i Pteropus_alecto.KB030862.1                             I 95 C 0
s Pteropus_vampyrus.KN525825.1                             3535060 24 -   4952924 -------------------------------------------------------------------------tta-ttgt--aca-gg-c----t--T--AA-TAACCCA
i Pteropus_vampyrus.KN525825.1                           I 101 C 0
s Puma_concolor.QAVW01001104.1                            18096498 24 +  38429054 -------------------------------------------------------------------------TTA-TGGT--GCA-AG-C----T--T--AA-GAGCCca
i Puma_concolor.QAVW01001104.1                           I 403 C 0
s Pygathrix_cinerea.k141_1153803                             24215 71 +     91421 CAACA-ATTTGTGA----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150708 71 -   7812017 CAACA-ATTTGTGA----AGA----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5085 71 +     72585 caaca-atttgtga----aga----g---ttt--ctatgaagaagAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911146 24 +   3329780 -------------------------------------------------------------------------tta-tctt--gca-gg-c----t--t--aa-caaccta
i Rhinolophus_sinicus.LVEH01000134.1                     I 105 C 0
s Rhinopithecus_bieti.k119_221883                            26045 71 +     27361 caaca-atttgtga----aga----g---ttt--ctatgaagaagAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119393 71 + 195417433 CAACA-ATTTGTGA----AGA----G---TTT--Ctatgaagaagaaa-----ggaggaggcaaAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233653 71 -   7961872 caaca-atttgtga----aga----g---ttt--ctatgaagaagAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72502  5 -    116970 -------------------------------------------------------------------------TTA-tc--------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 95 C 0
s Saguinus_bicolor.k141_1429097                               1439 68 +     27962 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GATGGGGGCAAAG-------TTG-TCTT--GCAA-A-C----T--T--AA-CAACCCA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1449 66 +      6077 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GG--GGGGCAACG-------TTG-TCTT--GCAA-A-C----T--T--AA-CAACCCA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1467 67 +      5971 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA------GTGGGGGCAAAG-------TTG-TCTT--GCAA-A-C----T--T--AA-CAACCCA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1522 66 +      5932 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GC--GGGGCAAAG-------TTG-TCTT--GCAA-G-C----T--T--AA-CAACCCA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1666 67 -      2099 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----G-CGGGGGCAAAG-------TTG-TCTT--GCAA-A-C----T--T--AA-CAACCCA
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388787 68 - 209938924 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GGCGGGGGCAAAG-------TTG-TCTT--GCAA-A-C----T--T--AA-CAACCCA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1469 67 +      5979 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----G-CGGGGGCAAAG-------TTG-TCTT--GCAA-A-C----T--T--AA-CAACCCA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1836 66 -      4301 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GG--GGGGCAACG-------TTG-TCTT--GCAA-A-C----T--T--AA-CAACCCA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235920 70 +   5703754 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-CT--TT--T--AA-CAACCCA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5510 70 +     21866 CAACA-ATTTGTG-------A----G---TTT--CTATGAAGAAGAAA-----GGAGGAGGCAAAG-------TTG-TCTT--GCAA-G-CT--TT--T--AA-CAACCCA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113683 24 +    313613 -------------------------------------------------------------------------TTA-TCTT--GTA--GGC----T--T--AC-caaccca
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 362 C 0
s Semnopithecus_entellus.k141_158471                         22532 71 +     27374 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26051 71 +     58920 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAAGCCA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12547 71 -     45317 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20205 71 -     42441 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAAGCCA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22885 71 -     29113 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          25954 71 -     48123 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    45943  6 +     77746 ------------------------------------------------------------------------------------------------------A-CAT-CC-
i Sigmodon_hispidus.SigHis_scaffold_20193                I 1653 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1855999 23 -   1910179 -------------------------------------------------------------------------TTA-TCTT--GCT--G-C----T--T--AT-CAGCCCC
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 C 0
s Spermophilus_dauricus.KZ294078.1                         1865986  8 +   3870691 ------------------------------------------------------------------------------------------------------A-CAACCCC
i Spermophilus_dauricus.KZ294078.1                       I 8282 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4145 24 -     97271 -------------------------------------------------------------------------at-atctt--gca-gg-c----t--T--AA-TAACCCA
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 410 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122199 24 +    196729 -------------------------------------------------------------------------TTA-CTTT--GCA-GG-A----T--G--AC-CAGCCCC
i Suricata_suricatta.SurSur_flattened_line_6629          I 434 C 0
s Symphalangus_syndactylus.tarseq_199                       388128 71 +   1523678 CAACA-ATTTGTGA----AAA----A---TTT--CTGTGAAGAAGAAA-----GGAGGAGACAAAG-------TTG-TCTT--GCAA-G-T----T--T--CA-CAACCCA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11325 24 +     22964 -------------------------------------------------------------------------TTA-TTTT--GCA-GG-C----T--T--GA-CAACGCA
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 104 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 309 20 +      5583 ---------------------------------------------------------------------------T-TCTT----A--T-G----T--T--CCATACTCGA
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 24 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189022 24 +    199430 -------------------------------------------------------------------------TTA-TCTT--GCA-GG-C----t--t--aa-caaccca
i Tapirus_indicus.TapInd_scaffold_7432                   I 639 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    102978 24 -    539355 -------------------------------------------------------------------------TTA-TCTT--GCA-GG-C----t--t--aa-caaccca
i Tapirus_terrestris.TapTer_scaffold_755                 I 640 C 0
s Tarsius_lariang.k141_1780720                                4630 70 +      6850 CAGCA-ACTTGTGA----GAA----G---TTT--CTATGGAG--GACTTTTAGGGACAAAA----G-------TTG-TCAT--GCAG-G-C----T--T--AA-CAACCCA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4669 70 +     20590 CAGCA-ACTTGTGA----GAA----G---TTT--CTATGGAG--GACTTTTAGGGACCAAA----G-------TTG-TCAT--GCAG-G-C----T--T--AA-CAACCCA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350409 71 - 186847797 CAACA-ATTGGTGG----AGA----G---TTT--Ctatgaagaagaaa-----ggaggaggcaaAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              21928  8 -     33621 ------------------------------------------------------------------------------------------------------A-CAAGCCA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          N 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17426 22 -     31044 ---------------------------------------------------------------------------T-TCTT--TCA--G-A----T--t--tcacacacta
i Tolypeutes_matacus.TolMat_scaffold_31955               I 24 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477341 24 -    610378 -------------------------------------------------------------------------TTA-TTTT--GTA-GA-C----t--t--aa-cgaccca
i Tonatia_saurophila.TonSau_scaffold_294                 I 96 C 0
s Trachypithecus_auratus.k141_1189070                        18096 71 +     26378 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30780 71 -     78344 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17417 71 +     25722 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25642 71 -     62838 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25759 71 +     46913 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6567 71 -     28527 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27581 71 -     64340 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25618 71 -     63452 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7061 71 +     22490 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          489 71 -      6147 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7483 71 -     13050 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252722 71 -   6242583 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACGAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58453 71 +     59866 CAACA-ATTTGTGA----AGA----A---TTT--CTGTGAAGACAAAA-----GGAGGAGGCAAAG-------TTG-TCTG--GCAA-G-C----T--T--AA-CAACCCA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831224 49 -   4065304 ------------------------------------TTGGAT--GACA-----GGAGAGAG----GCC-GAAGCTG-CCAT--TCTG-G-A----T--T--AG-AAAGACA
i Tupaia_chinensis.KB320699.1                            I 10 I 16
s Tupaia_tana.TupTan_flattened_line_394                       5740 49 -     70247 ------------------------------------TTGGAT--GACT-----GGAGAGAG----GCC-GAAGCTG-CCAT--TCTG-G-A----T--T--AG-AAAGACA
i Tupaia_tana.TupTan_flattened_line_394                  I 10 I 16
s Uropsilus_gracilis.UroGra_scaffold_7153                   104905 28 -    105689 -------------------------------------------------------------------------TCA-TTTT--ACA--AACTCATT--T--AC-caactca
i Uropsilus_gracilis.UroGra_scaffold_7153                I 352 C 0
s Ursus_maritimus.KK499267.1                                179265 24 +   5085361 -------------------------------------------------------------------------tt-gtctt--gca-gg-c----t--T--AA-CAACCCA
i Ursus_maritimus.KK499267.1                             I 640 C 0
s Varecia_rubra.k141_787544                                  22706 71 -     30710 cagca-atttgcaa----gaa----g---ttc--ctatggag--gaca-----ggagaggg----GCTCT-AGTTG-TCTT--GCAG-G-C----T--T--AA-TAACCCA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21613 71 -    147434 cagca-atttgcaa----gaa----g---ttc--ctatggag--gaca-----ggagaggg----GCTCT-AGTTG-TCTT--GCAG-G-C----T--T--AA-TAACCCA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102660 23 -    112863 -------------------------------------------------------------------------TT--TCTT--GCA-GG-C----T--T--AA-TAACCCA
i Vulpes_lagopus.VulLag_flattened_line_12041             I 412 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171744  8 -    224448 ------------------------------------------------------------------------------------------------------A-CAACCTC
i Xerus_inauris.XerIna_scaffold_2302                     I 7853 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26312 24 -     86975 -------------------------------------------------------------------------at-atctt--gca-gg-c----t--t--aa-caaccca
i Zalophus_californianus.ZalCal_flattened_line_17732     I 414 C 0
s Zapus_hudsonius.ZapHud_scaffold_211135                      1006  8 +      3117 ------------------------------------------------------------------------------------------------------A-CAAACTA
i Zapus_hudsonius.ZapHud_scaffold_211135                 N 0 I 20
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1869 4 +     36723 ACA-A
s Acinonyx_jubatus.LLWD01001279.1                           810260 3 +   1699592 a-a-g
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 4
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412779 3 +  29979442 A-A-G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 4
s Allactaga_bullata.AllBul_scaffold_20030                    15686 4 -     61208 A-AAT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 3
s Allochrocebus_lhoesti.k141_441277                          40975 4 +     44087 ACA-G
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13681 4 -     21945 ACA-G
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15357 4 +     32033 ACA-G
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69864 4 -     84148 GCA-G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42093 4 -     78289 GCA-G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41543 4 +     55831 GCA-G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39981 4 -     64179 GCA-G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21627 4 -     24835 GCA-G
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38610 4 +     45454 GCA-G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44308 4 +     70886 GCA-G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6433 4 +     30854 GCA-G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30572 4 +     42133 GCA-G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174332 3 -    412891 A-A-G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 4
s Aotus_azarae.k141_118258                                   48387 4 -     65372 GCA-G
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42134 4 +     43593 GCA-G
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670147 4 +   5030052 GCA-G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21789 4 -     23494 GCA-G
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6925 4 +      8415 GCA-G
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13673 4 -     32367 a-aat
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 11
s Arctocebus_calabarensis.k141_1364444                       17295 4 -     45910 GCA-T
i Arctocebus_calabarensis.k141_1364444                   C 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2617 3 -     15198 a-a-g
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 4
s Ateles_geoffroyi_b.tarseq_1536                               272371 4 +  21539123 GCA-G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8538 4 +     48076 GCA-G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3675 4 -     28759 GCA-G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31228 4 +     44353 GCA-G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46599 4 -     71267 GCA-G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20658 4 -     33135 GCA-G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3834 4 +     11645 GTG-G
i Avahi_laniger.k141_2756659                             C 0 I 7
s Avahi_peyrierasi.k141_1823318                               3835 4 -     19611 GTG-G
i Avahi_peyrierasi.k141_1823318                          C 0 I 7
s Cacajao_ayresi.k141_96119                                   5554 4 +     28062 GCA-G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40848 4 -     91139 GCA-G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18374 4 +     95584 GCA-G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18287 4 +    119600 GCA-G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7782 4 +     18648 GCA-G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7453 4 -     13885 GCA-G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16143 4 +     17162 GCA-G
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451098 4 + 189096842 GCA-G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17391 4 -     18408 GCA-G
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503049 3 +  60362399 a-a-g
i CanFam4.chr16                                          C 0 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6685 3 -     23171 a-a-g
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 4
s Canis_lupus_dingo.QKWQ01000480.1                          220028 3 +   9314153 A-A-G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 4
s Canis_lupus_familiaris.chr16                            41613163 3 +  59632846 a-a-g
i Canis_lupus_familiaris.chr16                           C 0 I 4
s Canis_lupus_orion.HG994398.1                            45104744 3 -  63665305 a-a-g
i Canis_lupus_orion.HG994398.1                           C 0 I 4
s Carlito_syrichta.NW_007259797.1                           268008 4 +    496798 ATA-A
i Carlito_syrichta.NW_007259797.1                        C 0 I 3
s Carollia_perspicillata.CarPer_scaffold_170178               2688 3 +      5315 a-a-g
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 4
s Castor_canadensis.CasCan_scaffold_39952                    20040 4 -     39886 c-aaa
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 3
s Cavia_aperea.AVPZ01000300.1                              4993600 4 +  23392119 a-gga
i Cavia_aperea.AVPZ01000300.1                            C 0 I 18
s Cavia_porcellus.DS562891.1                               4997042 4 +  23407841 a-gga
i Cavia_porcellus.DS562891.1                             C 0 I 18
s Cavia_tschudii.CavTsc_scaffold_23560                       60143 4 -     66877 A-GGA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 18
s Cebuella_niveiventris.k141_592277                           2677 4 -     12580 GCA-G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40563 4 +     53515 GCA-G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368766 4 -  26074798 GCA-G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5655 4 -     34880 GCA-G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64750 4 -     89041 GCA-G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1180 4 -      1636 ATA-A
i Cephalopachus_bancanus.k141_72622                      C 0 I 3
s Ceratotherium_simum.JH767749.1                          15489793 2 -  27778364 --a-g
i Ceratotherium_simum.JH767749.1                         C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16626 2 +     27315 --a-g
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 4
s Cercocebus_atys.KQ010504.1                                138313 4 -   4669795 ACA-G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42053 4 +     47900 ACA-G
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41886 4 -     44860 ACA-G
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41869 4 -    148725 ACA-G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24934 4 -     40656 ACA-G
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4870 4 +     20796 ACA-G
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9126 1 -     17524 A----
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24815 4 -     34525 ACA-G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9524 4 -     25376 ACA-G
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362090 4 -  39242232 ACA-G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267834 4 +  21565898 ACA-G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29292 4 -     45857 ACA-G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25079 4 -     32606 ACA-G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1265 4 +      8499 ACA-G
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22784 4 +     70610 ACA-G
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19643 4 +     36323 ACA-G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10440 3 -     19938 A-C-A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 4
s Cheirogaleus_major.k141_666340                             28268 4 -     33796 gtg-g
i Cheirogaleus_major.k141_666340                         C 0 I 7
s Cheirogaleus_medius.k141_759766                             2798 4 -     15404 GCG-G
i Cheirogaleus_medius.k141_759766                        C 0 I 7
s Cheracebus_lucifer.k141_2312002                             6662 4 -     32913 GCA-G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17075 4 -     40346 GCA-G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17339 4 +    216457 GCA-G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17123 4 +     39636 GCA-G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1509 4 +      5346 GCA-G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40194 4 -    112038 GCA-G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5766 4 +     34062 GCA-G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340540 4 +  18827391 ACA-G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7151 4 -     44032 ACA-G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301865 4 - 135778131 ACA-G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804941 3 +  53390261 A-A-G
i Condylura_cristata.JH655891.1                          C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           372 3 -      8242 a-a-g
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 4
s Cricetomys_gambianus.CriGam_scaffold_14425                 39953 4 -     83289 C-AGA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1549 3 +     87169 A-A-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 6
s Ctenodactylus_gundi.CteGun_scaffold_65                    642493 4 -   1526836 A-ACG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2572 4 +     50838 A-AAA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 16
s Cuniculus_paca.CunPac_flattened_line_7025                   1224 4 +     36344 A-AGA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 16
s Dasypus_novemcinctus.JH564415.1                          2107769 2 -   2246927 --a-g
i Dasypus_novemcinctus.JH564415.1                        C 0 I 4
s Desmodus_rotundus.KZ672289.1                            11862361 3 -  20541912 a-a-g
i Desmodus_rotundus.KZ672289.1                           C 0 I 4
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662085 2 -   1390856 --a-g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 4
s Diceros_bicornis.DicBicMic_scaffold_5955                  136870 2 -    198055 --a-g
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 4
s Dinomys_branickii.DinBra_scaffold_10381                    95956 4 -    115145 A-GGG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 16
s Dipodomys_ordii.KN672350.1                              18948157 4 -  37912305 A-AGG
i Dipodomys_ordii.KN672350.1                             C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_89095                   3104 4 -     10735 A-AGG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_80628                  7541 4 +     14636 A-GGA
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 27
s Echinops_telfairi.JH980293.1                            62851293 3 - 111700974 A-A-C
i Echinops_telfairi.JH980293.1                           I 7 I 4
s Eidolon_helvum.AWHC01266696.1                               3921 3 +     19438 a-a-g
i Eidolon_helvum.AWHC01266696.1                          C 0 I 4
s Ellobius_lutescens.LOEQ01008920.1                          28186 4 +    110024 C-AGC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 3
s Ellobius_talpinus.LOJH01026522.1                           10150 4 +     18970 C-AGC
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 3
s Enhydra_lutris.KZ291758.1                               24913581 3 +  41312741 A-a-a
i Enhydra_lutris.KZ291758.1                              C 0 I 4
s Eptesicus_fuscus.JH977646.1                             12575985 3 +  14770903 a-a-g
i Eptesicus_fuscus.JH977646.1                            C 0 I 4
s Equus_asinus.JREZ01000139.1                              3039067 2 -   4378816 --A-G
i Equus_asinus.JREZ01000139.1                            C 0 I 4
s Equus_caballus.CM000403.2                               21373001 2 +  39960074 --A-G
i Equus_caballus.CM000403.2                              C 0 I 4
s Equus_przewalskii.KK951119.1                              409787 2 -    498745 --A-G
i Equus_przewalskii.KK951119.1                           C 0 I 4
s Erythrocebus_patas.Contig38                               260096 4 +  21539334 ACA-G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243925 3 - 206538554 A-A-G
i Felis_catus.CM001381.2                                 C 0 I 4
s Felis_catus_fca126.CM031415.1                          185113707 3 - 205367284 A-A-G
i Felis_catus_fca126.CM031415.1                          C 0 I 4
s Felis_nigripes.FelNig_flattened_line_31944                 25055 3 -     30238 A-A-G
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 4
s Galago_moholi.ctg3793                                     121335 4 -    137831 GCA-G
i Galago_moholi.ctg3793                                  C 0 I 3
s Galago_senegalensis.k141_991736                             4876 4 +     22493 GCA-G
i Galago_senegalensis.k141_991736                        C 0 I 3
s Galagoides_demidoff.k141_561628                            16931 4 -     32986 GCA-G
i Galagoides_demidoff.k141_561628                        C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_74466               16683 3 +     18121 a-a-g
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 3
s Gorilla_beringei.k141_3358147                               2231 4 -      8343 ACG-A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251721 4 - 186649187 ACA-A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28058 3 -    327341 C-A-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 6
s Heterocephalus_glaber.JH602082.1                         1924666 4 -  22651954 A-AGA
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                      1547822 3 -   1711038 a-a-g
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 4
s Hipposideros_galeritus.HipGal_scaffold_23202               47138 3 +     49977 a-a-g
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 4
s Hoolock_leuconedys.ctg274                                    139988 4 -    630532 ACA-G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66535 3 +     83186 A-A-A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 6
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68893 4 +    143317 A-GGG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 17
s Hylobates_agilis.k141_1155965                               2648 4 +     12352 ACa-g
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9831 3 +     55766 ACa--
i Hylobates_klossii.k141_738755                          C 0 I 1
s Hylobates_pileatus_b.LG02                                       2049173 4 + 191637585 ACa-g
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798505 4 +  11177569 ACA-G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384425 4 +   7955117 C-AAA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 11
s Indri_indri.k141_4600452                                    1332 4 -      1527 GTG-G
i Indri_indri.k141_4600452                               C 0 I 7
s Jaculus_jaculus.JH725527.1                               1236844 4 +   9596543 A-AAA
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Lagothrix_lagothricha.k141_246028                          40914 4 +    110728 GCA-G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59462 3 -     65777 a-a-g
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 4
s Leontocebus_fuscicollis.k141_2994775                        1594 4 -     13097 GCA-G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1545 4 +      5940 GCA-G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1176 4 -      5717 GCA-G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7809 4 -     11567 GCA-G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9190 4 -     12945 GCA-G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6624 4 +     29618 gTG-G
i Lepilemur_ankaranensis.k141_567626                     C 0 I 7
s Lepilemur_dorsalis.k141_387009                              6621 4 +     31569 gCG-G
i Lepilemur_dorsalis.k141_387009                         C 0 I 7
s Lepilemur_ruficaudatus.k141_330196                          6631 4 +     24756 gcg-g
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 7
s Lepilemur_septentrionalis.k141_360456                       6625 4 +     16388 gTG-G
i Lepilemur_septentrionalis.k141_360456                  C 0 I 7
s Leptonychotes_weddellii.KB714746.1                        810931 3 -   3914936 a-a-g
i Leptonychotes_weddellii.KB714746.1                     C 0 I 4
s Lophocebus_aterrimus.ctg367                               330266 4 -   1826925 GCA-G
i Lophocebus_aterrimus.ctg367                            I 24 C 0
s Loris_lydekkerianus.k141_2031736                            7328 4 +     19643 GCA-A
i Loris_lydekkerianus.k141_2031736                       I 22 I 3
s Loris_tardigradus.ctg83                                  5040988 4 -   6120653 GCA-A
i Loris_tardigradus.ctg83                                I 22 I 3
s Lycaon_pictus.CM007581.1                                41612318 3 +  59628241 a-a-g
i Lycaon_pictus.CM007581.1                               C 0 I 4
s Macaca_arctoides.k141_1757516                              42550 4 -     61512 ACA-G
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370178 4 -  60120075 ACA-G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22499 4 +     30207 ACA-G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19602 4 -     24934 ACA-G
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22385 4 +     30527 ACA-G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33575 4 -     50087 ACA-G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43313 4 +     51645 ACA-G
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411887 4 - 187317192 aca-g
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396770 1 +  25927173 A----
i Macaca_nemestrina.KQ007038.1                           C 0 I 12
s Macaca_nigra.k141_2818840                                  45901 4 -     62418 ACA-G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22589 1 +     24253 A----
i Macaca_radiata.k141_3557992                            C 0 I 12
s Macaca_siberu.k141_2185972                                 42344 4 +     59329 ACA-G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268310 4 +    668171 ACA-G
i Macaca_silenus.Contig273                               I 132 C 0
s Macaca_thibetana.k99_41370                                 19524 4 +     21031 ACA-G
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               33257 4 +     33478 ACA-G
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220887 3 -    270270 a-a-g
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 4
s Mandrillus_leucophaeus.scaffold280                        319654 4 +  24302211 ACA-G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354486 4 -    752769 ACA-G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671166 3 -    737560 a-a-g
i Manis_javanica.JSZB01003497.1                          C 0 I 4
s Manis_pentadactyla.KN006162.1                             218457 3 +    317179 a-a-g
i Manis_pentadactyla.KN006162.1                          C 0 I 4
s Marmota_marmota.CZRN01000018.1                           7498624 4 +  40650429 C-AAA
i Marmota_marmota.CZRN01000018.1                         C 0 I 11
s Megaderma_lyra.MegLyr_scaffold_4542                       148078 3 +    207569 C-A-A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 4
s Mellivora_capensis.MelCap_flattened_line_19308             23454 3 -     74585 A-a-g
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 4
s Mico_argentatus.k141_582562                                 7554 4 +     17804 GCA-G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8338 4 -     12984 GCA-G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16289 4 -     26561 GCA-G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982236 4 +  93316391 GCG-G
i Microcebus_murinus.CM007674.1                          C 0 I 7
s Microgale_talazaci.MicTal_scaffold_6613                    41612 3 +    145209 A-G-C
i Microgale_talazaci.MicTal_scaffold_6613                I 7 I 4
s Micronycteris_hirsuta.MicHir_scaffold_2233                182304 3 +    200668 A-A-G
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 4
s Miopithecus_ogouensis.k141_1534655                         19648 4 -     27822 ACA-G
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5941 3 +     27589 a-a-g
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 4
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176481 3 +    366855 A-A-G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 4
s Mungos_mungo.MunMun_flattened_line_18455                   15812 3 -     63510 C-A-A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 6
s Murina_feae.MurFea_scaffold_17764                          36333 3 +     47283 a-a-g
i Murina_feae.MurFea_scaffold_17764                      C 0 I 4
s Mustela_putorius.JH418006.1                             14352394 3 +  14710649 A-A-G
i Mustela_putorius.JH418006.1                            C 0 I 4
s Myotis_brandtii.KE162005.1                               9790349 3 +  10118263 a-a-a
i Myotis_brandtii.KE162005.1                             C 0 I 4
s Myotis_davidii.KB100139.1                                4384748 3 +   6019432 a-a-g
i Myotis_davidii.KB100139.1                              C 0 I 4
s Myotis_lucifugus.GL429869.1                               380570 3 +   4330536 a-a-g
i Myotis_lucifugus.GL429869.1                            C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117211 2 +    130748 A-A--
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 4
s Neomonachus_schauinslandi.NINY01007730.1                11466328 3 -  31847680 a-a-g
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 4
s Noctilio_leporinus.NocLep_scaffold_7894                   125129 3 -    149072 A-C-A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           50912 4 -    132029 ACA-G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7007 4 -     16345 ACA-G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12892 4 +     22201 ACA-G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411227 3 -  22158432 ACA--
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23290 4 -     54323 ACA-G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195920 3 +   9404916 a-a-g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 4
s Nycticebus_bengalensis.LG01                             93632619 4 + 196305487 GCA-G
i Nycticebus_bengalensis.LG01                            C 0 I 3
s Nycticebus_coucang.k141_8166032                             2008 4 +      2758 GCA-G
i Nycticebus_coucang.k141_8166032                        C 0 I 3
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560873 4 - 199412804 GCA-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 3
s Octodon_degus.JH651603.1                                11044926 4 -  11899542 A-AAA
i Octodon_degus.JH651603.1                               C 0 I 16
s Odobenus_rosmarus.KB229312.1                             1449116 3 +   2017862 a-a-g
i Odobenus_rosmarus.KB229312.1                           C 0 I 4
s Ondatra_zibethicus.OndZib_scaffold_7387                    89902 4 -    140218 C-AGC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_2487                   104736 4 +    107918 C-AGA
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 I 3
s Orycteropus_afer.OryAfe_flattened_line_171931              11001 3 -     14239 t-a-g
i Orycteropus_afer.OryAfe_flattened_line_171931          I 7 I 4
s Otocyon_megalotis.JAEUCK010005147.1                        36959 3 +    559221 a-a-g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 4
s Otolemur_crassicaudatus.k141_649260                        36460 4 -     51505 GCA-G
i Otolemur_crassicaudatus.k141_649260                    C 0 I 3
s Otolemur_garnettii.GL873799.1                             349474 4 +   1103335 ACA-G
i Otolemur_garnettii.GL873799.1                          C 0 I 3
s Pan_troglodytes.CM009242.2                               1469110 4 - 189151597 ACa-a
i Pan_troglodytes.CM009242.2                             I 71 I 4
s Panthera_onca.PanOnc_flattened_line_3271                   21876 3 -    230217 a-a-g
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 4
s Panthera_pardus.KV860321.1                              18459202 3 -  18783137 a-a-g
i Panthera_pardus.KV860321.1                             C 0 I 4
s Panthera_tigris.KE722367.1                               3969922 3 +   8748460 a-a-g
i Panthera_tigris.KE722367.1                             C 0 I 4
s Papio_anubis.CM001495.2                                   240494 4 - 183742232 GCA-G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6958 4 +     21308 GCA-G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  287997 4 -  20919399 GCA-G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19613 4 -     27687 GCA-G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12749 4 +     16796 GCA-G
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19559 4 -     23640 GCA-G
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12534 3 +     78924 T-A-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 6
s Perodicticus_ibeanus.k141_1921260                          22714 4 +     31479 CCA-G
i Perodicticus_ibeanus.k141_1921260                      C 0 I 3
s Perodicticus_potto.k141_1854441                            15084 4 -     24908 CCA-G
i Perodicticus_potto.k141_1854441                        C 0 I 3
s Perognathus_longimembris.PerPac_flattened_line_28053       37354 4 +     38305 A-AGA
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 I 1
s Peromyscus_maniculatus.KI615324.1                         244382 4 +  18517816 C-AGA
i Peromyscus_maniculatus.KI615324.1                      C 0 I 3
s Petromus_typicus.PetTyp_scaffold_17301                     29606 4 -     56120 A-GGA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 16
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              508 3 +     22231 a-a-g
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 4
s Pithecia_albicans.k141_1239476                             62544 4 +    207309 GCA-G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3664 1 -     25401 C----
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29379 4 +     58159 GCA-G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29655 4 +     63561 GCA-G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29418 4 +     51148 GCA-G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554411 1 -   4542175 G----
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29402 4 +     51125 GCA-G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5833 4 +     39866 GCA-G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           918 4 -      9282 GCA-G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40322 4 -     87950 GCA-G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40715 4 -     88961 GCA-G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5414 4 -     39403 GCA-G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40368 4 +     87928 GCA-G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5411 4 -     60166 GCA-G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12347 4 -     67232 GCA-G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40263 4 -     90634 GCA-G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41731 4 +     89403 GCA-G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174737 4 - 189387572 ACA-G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189735 4 -   9816681 ACA-G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563717 4 -   2598838 GTG-G
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 3
s Propithecus_coronatus.k141_209299                           1353 4 -      7103 GTG-G
i Propithecus_coronatus.k141_209299                      C 0 I 3
s Propithecus_diadema.k141_153680                             1950 4 -     11706 GTG-G
i Propithecus_diadema.k141_153680                        C 0 I 3
s Propithecus_edwardsi.k141_635656                            5686 4 -     30655 GTG-G
i Propithecus_edwardsi.k141_635656                       C 0 I 3
s Propithecus_perrieri.k141_1496898                          32011 4 +     46564 GTG-G
i Propithecus_perrieri.k141_1496898                      C 0 I 3
s Propithecus_tattersalli.k141_1127767                       92282 4 -     98465 GTG-G
i Propithecus_tattersalli.k141_1127767                   C 0 I 3
s Propithecus_verreauxi.k141_1047036                          5919 4 +     35169 GTG-G
i Propithecus_verreauxi.k141_1047036                     C 0 I 3
s Pteronotus_parnellii.KE847780.1                            49547 3 -     66298 A-A-G
i Pteronotus_parnellii.KE847780.1                        C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2172 3 -     18639 A-a-g
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 4
s Pteropus_alecto.KB030862.1                               5838517 3 -  28871421 A-A-G
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Pteropus_vampyrus.KN525825.1                             3535084 3 -   4952924 A-A-G
i Pteropus_vampyrus.KN525825.1                           C 0 I 3
s Puma_concolor.QAVW01001104.1                            18096522 3 +  38429054 a-a-g
i Puma_concolor.QAVW01001104.1                           C 0 I 4
s Rhinolophus_sinicus.LVEH01000134.1                       2911170 3 +   3329780 a-a-g
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 4
s Saguinus_bicolor.k141_1429097                               1507 4 +     27962 GCA-G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1515 4 +      6077 GCA-G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1534 4 +      5971 GCA-G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1588 4 +      5932 GCA-G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1733 4 -      2099 GCA-T
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388855 4 - 209938924 GCA-G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1536 4 +      5979 GCA-G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1902 4 -      4301 GCA-G
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235990 4 +   5703754 GCA-G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5580 4 +     21866 GCA-G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113707 3 +    313613 a-a-g
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 4
s Sigmodon_hispidus.SigHis_scaffold_20193                    45949 4 +     77746 C-ATA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_126            1856022 3 -   1910179 A-A-A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 4
s Spermophilus_dauricus.KZ294078.1                         1865994 4 +   3870691 C-AAA
i Spermophilus_dauricus.KZ294078.1                       C 0 I 11
s Spilogale_gracilis.SpiGra_flattened_line_13525              4169 3 -     97271 A-A-G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 4
s Suricata_suricatta.SurSur_flattened_line_6629             122223 3 +    196729 C-A-A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 6
s Symphalangus_syndactylus.tarseq_199                       388199 3 +   1523678 ACA--
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11349 3 +     22964 A-A-G
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 4
s Tamandua_tetradactyla.TamTet_scaffold_224794                 329 2 +      5583 A-A--
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 4
s Tapirus_indicus.TapInd_scaffold_7432                      189046 2 +    199430 --a-g
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 4
s Tapirus_terrestris.TapTer_scaffold_755                    103002 2 -    539355 --a-g
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 4
s Tarsius_lariang.k141_1780720                                4700 4 +      6850 ATG-A
i Tarsius_lariang.k141_1780720                           C 0 I 3
s Tarsius_wallacei.k141_226975                                4739 4 +     20590 ATG-A
i Tarsius_wallacei.k141_226975                           C 0 I 3
s Theropithecus_gelada.CM009954.1                           350480 4 - 186847797 ACA-G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              21936 4 -     33621 A-GGA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 16
s Tolypeutes_matacus.TolMat_scaffold_31955                   17448 3 -     31044 a-a-g
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 4
s Tonatia_saurophila.TonSau_scaffold_294                    477365 3 -    610378 a-a-g
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 4
s Tupaia_chinensis.KB320699.1                              1831289 3 -   4065304 A-A-G
i Tupaia_chinensis.KB320699.1                            I 16 I 3
s Tupaia_tana.TupTan_flattened_line_394                       5805 3 -     70247 A-A-C
i Tupaia_tana.TupTan_flattened_line_394                  I 16 I 3
s Uropsilus_gracilis.UroGra_scaffold_7153                   104933 3 -    105689 a-a-g
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 4
s Ursus_maritimus.KK499267.1                                179289 3 +   5085361 A-A-G
i Ursus_maritimus.KK499267.1                             C 0 I 4
s Varecia_rubra.k141_787544                                  22777 4 -     30710 GTG-G
i Varecia_rubra.k141_787544                              C 0 I 7
s Varecia_variegata.k141_289850                              21684 4 -    147434 GTG-G
i Varecia_variegata.k141_289850                          C 0 I 7
s Vulpes_lagopus.VulLag_flattened_line_12041                102683 3 -    112863 A-a-g
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 4
s Xerus_inauris.XerIna_scaffold_2302                        171752 4 -    224448 A-AAA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 10
s Zalophus_californianus.ZalCal_flattened_line_17732         26336 3 -     86975 a-a-g
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 4
s Zapus_hudsonius.ZapHud_scaffold_230229                      1003 2 +      2695 A-G--
i Zapus_hudsonius.ZapHud_scaffold_230229                 n 20 I 4
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Pygathrix_nigripes_a.k141_215492                              5156 0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  150779 0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             24286 0 +     91421 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58524 0 +     59866 C
e Trachypithecus_phayrei.ctg124                             252793 0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                         7554 0 -     13050 C
e Trachypithecus_melamera.k141_591572                          560 0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     7132 0 +     22490 C
e Trachypithecus_laotum.k141_928651                          25689 0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      27652 0 -     64340 C
e Trachypithecus_germaini.k141_57262                          6638 0 -     28527 C
e Trachypithecus_geei.k141_1001272                           25830 0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      25713 0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       17488 0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     30851 0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        18167 0 +     26378 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Semnopithecus_vetulus.k141_244474                          26025 0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     22956 0 -     29113 C
e Semnopithecus_priam.k141_714795                            20276 0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12618 0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      26122 0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22603 0 +     27374 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72507 0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             233724 0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104119464 0 + 195417433 C
e Rhinopithecus_bieti.k119_221883                            26116 0 +     27361 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42090 0 -     80239 C
e Presbytis_comata.k141_1230337                              24895 0 +     69807 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Piliocolobus_tephrosceles.PDMG02034973.1                    2398 0 +      5735 C
e Piliocolobus_kirkii.k141_579682                            44720 0 +     45295 C
e Piliocolobus_gordonorum.k141_905727                        62121 0 -     63152 C
e Piliocolobus_badius.k141_2495623                            6413 0 +      7560 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26262 0 +     34575 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mirza_zaza.k141_766280                                     50064 3 -     62432 I
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290246 0 +  12879189 C
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Colobus_polykomos.k141_1559707                              6308 0 -      6605 C
e Colobus_guereza.LG01                                      375570 726 - 200372422 I
e Colobus_angolensis.KN981557.1                             406419 0 -   2368649 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allenopithecus_nigroviridis.k141_3755588                   45153 0 +     53615 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1873 4 +     36723 TCTT
s Allochrocebus_lhoesti.k141_441277                          40979 4 +     44087 TCTT
i Allochrocebus_lhoesti.k141_441277                      C 0 I 69
s Allochrocebus_preussi.k141_1993939                         13685 4 -     21945 TCTT
i Allochrocebus_preussi.k141_1993939                     C 0 I 52
s Allochrocebus_solatus.k141_3554717                         15361 4 +     32033 TCTT
i Allochrocebus_solatus.k141_3554717                     C 0 I 53
s Cercocebus_atys.KQ010504.1                                138317 4 -   4669795 TCTT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42057 4 +     47900 TCTT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41890 4 -     44860 TCTT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41873 4 -    148725 TCTT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24938 4 -     40656 TCTT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4874 4 +     20796 TCTT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24819 4 -     34525 TCTT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9528 4 -     25376 TCTT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362094 4 -  39242232 TCTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267838 4 +  21565898 TCTT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29296 4 -     45857 TCTT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25083 4 -     32606 TCTT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1269 4 +      8499 TCTT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22788 4 +     70610 TCTT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19647 4 +     36323 TCTT
i Cercopithecus_roloway.k141_3012935                     C 0 I 69
s Chlorocebus_aethiops.ctg25                                340544 4 +  18827391 TCTT
i Chlorocebus_aethiops.ctg25                             C 0 I 69
s Chlorocebus_pygerythrus.k141_3063162                        7155 1 -     44032 T---
i Chlorocebus_pygerythrus.k141_3063162                   C 0 I 6
s Chlorocebus_sabaeus.CM001947.1                            301869 4 - 135778131 TCTT
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 69
s Erythrocebus_patas.Contig38                               260100 4 +  21539334 TCTT
i Erythrocebus_patas.Contig38                            C 0 I 36
s Gorilla_beringei.k141_3358147                               2235 4 -      8343 TCTT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251725 4 - 186649187 TCTT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    139992 4 -    630532 TCTT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               2652 4 +     12352 tctt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                               9835 4 +     55766 tctt
i Hylobates_klossii.k141_738755                          I 1 C 0
s Hylobates_pileatus_b.LG02                                       2049177 4 + 191637585 tctt
i Hylobates_pileatus_b.LG02                                     C 0 I 305
s Hylobates_pileatus_a.tarseq_633                            7798509 4 +  11177569 TCTT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               330270 4 -   1826925 TCTT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              42554 4 -     61512 TCTT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370182 4 -  60120075 TCTT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22503 4 +     30207 TCTT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19606 4 -     24934 TCTT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22389 4 +     30527 TCTT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33579 4 -     50087 TCTT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43317 4 +     51645 TCTT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                411891 4 - 187317192 tctt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nigra.k141_2818840                                  45905 4 -     62418 TCTT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_siberu.k141_2185972                                 42348 4 +     59329 TCTT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268314 4 +    668171 TCTT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19528 4 +     21031 TCTT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               33261 4 +     33478 TCTT
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319658 4 +  24302211 TCTT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354490 4 -    752769 TCTT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19652 4 -     27822 TCTT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Nomascus_annamensis.k141_1771965                           50916 4 -    132029 TCTT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7011 4 -     16345 TCTT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12896 4 +     22201 TCTT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_a.k141_941534                                  23294 4 -     54323 TCTT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_troglodytes.KZ622849.1                                 30194 4 -    110857 tctt
i Pan_troglodytes.KZ622849.1                             I 587 I 5
s Papio_anubis.CM001495.2                                   240498 4 - 183742232 TCTT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6962 4 +     21308 TCTT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288001 4 -  20919399 TCTT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19617 4 -     27687 TCTT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12753 4 +     16796 TCTT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19563 4 -     23640 TCTT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Pongo_abelii.CM009266.2                                   174741 4 - 189387572 TCTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189739 4 -   9816681 TCTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Theropithecus_gelada.CM009954.1                           350484 4 - 186847797 TCTT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21940 16 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     29610 16 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_28053       37358 1 +     38305 I
e Octodon_degus.JH651603.1                                11044930 16 -  11899542 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68897 17 +    143317 I
e Heterocephalus_glaber.JH602082.1                         1924670 2 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  7545 27 +     14636 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   3108 1 -     10735 I
e Dipodomys_ordii.KN672350.1                              18948161 1 -  37912305 I
e Dinomys_branickii.DinBra_scaffold_10381                    95960 16 -    115145 I
e Cuniculus_paca.CunPac_flattened_line_7025                   1228 16 +     36344 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2576 16 +     50838 I
e Cavia_tschudii.CavTsc_scaffold_23560                       60147 18 -     66877 I
e Cavia_porcellus.DS562891.1                               4997046 18 +  23407841 I
e Cavia_aperea.AVPZ01000300.1                              4993604 18 +  23392119 I
e Microgale_talazaci.MicTal_scaffold_6613                    41615 4 +    145209 I
e Echinops_telfairi.JH980293.1                            62851296 4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              11004 4 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862364 4 -  20541912 I
e Pygathrix_nigripes_a.k141_215492                              5156 0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  150779 0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             24286 0 +     91421 C
e Callibella_humilis.k141_1233062                             7786 0 +     18648 C
e Perodicticus_potto.k141_1854441                            15088 3 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          22718 3 +     31479 I
e Otolemur_garnettii.GL873799.1                             349478 3 +   1103335 I
e Otolemur_crassicaudatus.k141_649260                        36464 3 -     51505 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560877 3 - 199412804 I
e Nycticebus_coucang.k141_8166032                             2012 3 +      2758 I
e Nycticebus_bengalensis.LG01                             93632623 3 + 196305487 I
e Loris_tardigradus.ctg83                                  5040992 3 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            7332 3 +     19643 I
e Galagoides_demidoff.k141_561628                            16935 3 -     32986 I
e Galago_senegalensis.k141_991736                             4880 3 +     22493 I
e Galago_moholi.ctg3793                                     121339 3 -    137831 I
e Arctocebus_calabarensis.k141_1364444                       17299 3 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17451 4 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107771 4 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10443 4 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2691 4 +      5315 I
e Tupaia_tana.TupTan_flattened_line_394                       5808 3 -     70247 I
e Tupaia_chinensis.KB320699.1                              1831292 3 -   4065304 I
e Zalophus_californianus.ZalCal_flattened_line_17732         26339 4 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                102686 4 -    112863 I
e Ursus_maritimus.KK499267.1                                179292 4 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              4172 4 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2175 4 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        36962 4 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1449119 4 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                195923 4 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11466331 4 -  31847680 I
e Mustela_putorius.JH418006.1                             14352397 4 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         5944 4 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             23457 4 -     74585 I
e Lycaon_pictus.CM007581.1                                41612321 4 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        810934 4 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24913584 4 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45104747 4 -  63665305 I
e Canis_lupus_familiaris.chr16                            41613166 4 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          220031 4 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6688 4 -     23171 I
e CanFam4.chr16                                           42503052 4 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2620 4 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412782 4 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_230229                      1005 4 +      2695 I
e Xerus_inauris.XerIna_scaffold_2302                        171756 10 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Varecia_variegata.k141_289850                              21688 7 -    147434 I
e Varecia_rubra.k141_787544                                  22781 7 -     30710 I
e Uropsilus_gracilis.UroGra_scaffold_7153                   104936 4 -    105689 I
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58524 0 +     59866 C
e Trachypithecus_phayrei.ctg124                             252793 0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                         7554 0 -     13050 C
e Trachypithecus_melamera.k141_591572                          560 0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     7132 0 +     22490 C
e Trachypithecus_laotum.k141_928651                          25689 0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      27652 0 -     64340 C
e Trachypithecus_germaini.k141_57262                          6638 0 -     28527 C
e Trachypithecus_geei.k141_1001272                           25830 0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      25713 0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       17488 0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     30851 0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        18167 0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    477368 4 -    610378 I
e Tarsius_wallacei.k141_226975                                4743 3 +     20590 I
e Tarsius_lariang.k141_1780720                                4704 3 +      6850 I
e Tapirus_terrestris.TapTer_scaffold_755                    103004 4 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      189048 4 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                 331 4 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11352 4 +     22964 I
e Symphalangus_syndactylus.tarseq_199                       388202 0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122226 6 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1865998 11 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1856025 4 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    45953 3 +     77746 I
e Semnopithecus_vetulus.k141_244474                          26025 0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     22956 0 -     29113 C
e Semnopithecus_priam.k141_714795                            20276 0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12618 0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      26122 0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22603 0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113710 4 +    313613 I
e Sapajus_macrocephalus.k141_796559                           5584 0 +     21866 C
e Sapajus_apella.ctg103                                     235994 0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1906 0 -      4301 C
e Saguinus_mystax.k141_8077960                                1540 0 +      5979 C
e Saguinus_midas.LG03                                       388859 0 - 209938924 C
e Saguinus_labiatus.k141_1571581                              1737 0 -      2099 C
e Saguinus_inustus.k141_2469308                               1592 0 +      5932 C
e Saguinus_imperator.k141_1898058                             1538 0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             1519 0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1511 0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72507 0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             233724 0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104119464 0 + 195417433 C
e Rhinopithecus_bieti.k119_221883                            26116 0 +     27361 C
e Rhinolophus_sinicus.LVEH01000134.1                       2911173 4 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096525 4 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3535087 3 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838520 3 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49550 4 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5923 3 +     35169 I
e Propithecus_tattersalli.k141_1127767                       92286 3 -     98465 I
e Propithecus_perrieri.k141_1496898                          32015 3 +     46564 I
e Propithecus_edwardsi.k141_635656                            5690 3 -     30655 I
e Propithecus_diadema.k141_153680                             1954 3 -     11706 I
e Propithecus_coronatus.k141_209299                           1357 3 -      7103 I
e Propithecus_coquerelli.NW_012148875.1                    1563721 3 -   2598838 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42090 0 -     80239 C
e Presbytis_comata.k141_1230337                              24895 0 +     69807 C
e Plecturocebus_moloch.k141_1031110                          41735 0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          40267 0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      12351 0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          5415 0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          40372 0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          5418 0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     40719 0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       40326 0 -     87950 C
e Plecturocebus_brunneus.k141_862875                           922 0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        5837 0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29406 0 +     51125 C
e Pithecia_pithecia.tarseq_165                              554412 0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           29422 0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         29659 0 +     63561 C
e Pithecia_hirsuta.k141_640380                               29383 0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          3665 0 -     25401 C
e Pithecia_albicans.k141_1239476                             62548 0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              511 4 +     22231 I
e Piliocolobus_tephrosceles.PDMG02034973.1                    2398 0 +      5735 C
e Piliocolobus_kirkii.k141_579682                            44720 0 +     45295 C
e Piliocolobus_gordonorum.k141_905727                        62121 0 -     63152 C
e Piliocolobus_badius.k141_2495623                            6413 0 +      7560 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244386 3 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12537 6 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969925 4 +   8748460 I
e Panthera_pardus.KV860321.1                              18459205 4 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   21879 4 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104740 3 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    89906 3 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_b.tarseq_93                            8411230 0 -  22158432 C
e Noctilio_leporinus.NocLep_scaffold_7894                   125132 0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26262 0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117213 4 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380573 4 +   4330536 I
e Myotis_davidii.KB100139.1                                4384751 4 +   6019432 I
e Myotis_brandtii.KE162005.1                               9790352 4 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36336 4 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   15815 6 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176484 4 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mirza_zaza.k141_766280                                     50064 3 -     62432 I
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182307 4 +    200668 I
e Microcebus_murinus.CM007674.1                           74982240 7 +  93316391 I
e Mico_schneideri.k141_1877700                                     16293 0 -     26561 C
e Mico_humeralifer.k141_1180625                               8342 0 -     12984 C
e Mico_argentatus.k141_582562                                 7558 0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148081 4 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7498628 11 +  40650429 I
e Manis_pentadactyla.KN006162.1                             218460 4 +    317179 I
e Manis_javanica.JSZB01003497.1                             671169 4 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                220890 4 -    270270 I
e Macaca_radiata.k141_3557992                                22590 12 +     24253 I
e Macaca_nemestrina.KQ007038.1                              396771 12 +  25927173 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6629 7 +     16388 I
e Lepilemur_ruficaudatus.k141_330196                          6635 7 +     24756 I
e Lepilemur_dorsalis.k141_387009                              6625 7 +     31569 I
e Lepilemur_ankaranensis.k141_567626                          6628 7 +     29618 I
e Leontopithecus_rosalia.k141_349454                          9194 0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     7813 0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        1180 0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           1549 0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        1598 0 -     13097 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59465 4 -     65777 I
e Lagothrix_lagothricha.k141_246028                          40918 0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236848 3 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Indri_indri.k141_4600452                                    1336 7 -      1527 I
e Ictidomys_tridecemlineatus.JH393364.1                     384429 11 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66538 6 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_23202               47141 4 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547825 4 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28061 6 -    327341 I
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16686 3 +     18121 I
e Felis_nigripes.FelNig_flattened_line_31944                 25058 4 -     30238 I
e Felis_catus_fca126.CM031415.1                          185113710 4 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Equus_przewalskii.KK951119.1                              409789 4 -    498745 I
e Equus_caballus.CM000403.2                               21373003 4 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3039069 4 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12575988 4 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           10154 3 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          28190 3 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3924 4 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  136872 4 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662087 4 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290246 0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    642497 3 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1552 6 +     87169 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 39957 3 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           375 4 -      8242 I
e Condylura_cristata.JH655891.1                           35804944 3 +  53390261 I
e Colobus_polykomos.k141_1559707                              6308 0 -      6605 C
e Colobus_guereza.LG01                                      375570 726 - 200372422 I
e Colobus_angolensis.KN981557.1                             406419 0 -   2368649 C
e Chiropotes_sagulatus.k141_1113111                           5770 0 +     34062 C
e Chiropotes_israelita.k141_313004                           40198 0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           1513 0 +      5346 C
e Cheracebus_torquatus.k141_890198                           17127 0 +     39636 C
e Cheracebus_regulus.k141_471822                             17343 0 +    216457 C
e Cheracebus_lugens.k141_1179667                             17079 0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             6666 0 -     32913 C
e Cheirogaleus_medius.k141_759766                             2802 7 -     15404 I
e Cheirogaleus_major.k141_666340                             28272 7 -     33796 I
e Cercopithecus_diana.k141_132293                             9127 0 -     17524 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16628 4 +     27315 I
e Cephalopachus_bancanus.k141_72622                           1184 3 -      1636 I
e Cebus_unicolor.k141_1654760                                64754 0 -     89041 C
e Cebus_olivaceus.k141_1404781                                5659 0 -     34880 C
e Cebus_albifrons.Contig27                                  368770 0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               40567 0 +     53515 C
e Cebuella_niveiventris.k141_592277                           2681 0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20044 3 -     39886 I
e Carlito_syrichta.NW_007259797.1                           268012 3 +    496798 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17395 0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165451102 0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           16147 0 +     17162 C
e Callimico_goeldii.k141_1609886                              7457 0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         18291 0 +    119600 C
e Cacajao_hosomi.k141_81245                                  18378 0 +     95584 C
e Cacajao_calvus.k141_89051                                  40852 0 -     91139 C
e Cacajao_ayresi.k141_96119                                   5558 0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3839 7 -     19611 I
e Avahi_laniger.k141_2756659                                  3838 7 +     11645 I
e Ateles_paniscus.k141_866194                                20662 0 -     33135 C
e Ateles_marginatus.k141_970259                              46603 0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              31232 0 +     44353 C
e Ateles_chamek.k141_615173                                   3679 0 -     28759 C
e Ateles_belzebuth.k141_1572163                               8542 0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               272375 0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      13677 11 -     32367 I
e Aotus_vociferans.k141_944972                                6929 0 +      8415 C
e Aotus_trivirgatus.k141_192090                              21793 0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                670151 0 +   5030052 C
e Aotus_griseimembra.k141_982342                             42138 0 +     43593 C
e Aotus_azarae.k141_118258                                   48391 0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174335 4 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30576 0 +     42133 C
e Alouatta_puruensis.k141_251022                              6437 0 +     30854 C
e Alouatta_palliata.k141_638677                              44312 0 +     70886 C
e Alouatta_nigerrima.k141_376068                             38614 0 +     45454 C
e Alouatta_macconnelli.k141_361275                           21631 0 -     24835 C
e Alouatta_juara.k141_1687208                                39985 0 -     64179 C
e Alouatta_discolor.k141_2561099                             41547 0 +     55831 C
e Alouatta_caraya.k141_1109140                               42097 0 -     78289 C
e Alouatta_belzebul.k141_1011583                             69868 0 -     84148 C
e Allenopithecus_nigroviridis.k141_3755588                   45153 0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    15690 3 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810263 4 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1877 5 +     36723 CTCCT
s Allochrocebus_lhoesti.k141_441277                          41052 2 +     44087 CT---
i Allochrocebus_lhoesti.k141_441277                      I 69 C 0
s Cercocebus_atys.KQ010504.1                                138321 5 -   4669795 CTCCT
i Cercocebus_atys.KQ010504.1                             C 0 I 19
s Cercocebus_chrysogaster.k141_1522556                       42061 5 +     47900 CTCCT
i Cercocebus_chrysogaster.k141_1522556                   C 0 I 19
s Cercocebus_lunulatus.k141_2779015                          41894 5 -     44860 CTCCT
i Cercocebus_lunulatus.k141_2779015                      C 0 I 19
s Cercocebus_torquatus.k141_2159127                          41877 5 -    148725 CTCCT
i Cercocebus_torquatus.k141_2159127                      C 0 I 19
s Cercopithecus_ascanius.k141_3120866                        24942 2 -     40656 CT---
i Cercopithecus_ascanius.k141_3120866                    C 0 I 36
s Cercopithecus_cephus.k141_4183004                           4878 2 +     20796 CT---
i Cercopithecus_cephus.k141_4183004                      C 0 I 36
s Cercopithecus_hamlyni.k141_566925                          24823 2 -     34525 CT---
i Cercopithecus_hamlyni.k141_566925                      C 0 I 18
s Cercopithecus_lowei.k141_2101310                            9532 2 -     25376 CT---
i Cercopithecus_lowei.k141_2101310                       C 0 I 18
s Cercopithecus_albogularis.ctg5                                  362098 2 -  39242232 CT---
i Cercopithecus_albogularis.ctg5                               C 0 I 36
s Cercopithecus_mona.ctg39                                  267842 2 +  21565898 CT---
i Cercopithecus_mona.ctg39                               C 0 I 15
s Cercopithecus_neglectus.k141_858615                        29300 2 -     45857 CT---
i Cercopithecus_neglectus.k141_858615                    C 0 I 18
s Cercopithecus_nictitans.k141_2995370                       25087 2 -     32606 CT---
i Cercopithecus_nictitans.k141_2995370                   C 0 I 36
s Cercopithecus_petaurista.k141_42573                         1273 2 +      8499 CT---
i Cercopithecus_petaurista.k141_42573                    C 0 I 7
s Cercopithecus_pogonias.k141_6079                           22792 2 +     70610 CT---
i Cercopithecus_pogonias.k141_6079                       C 0 I 18
s Cercopithecus_roloway.k141_3012935                         19720 2 +     36323 CT---
i Cercopithecus_roloway.k141_3012935                     I 69 C 0
s Chlorocebus_aethiops.ctg25                                340617 2 +  18827391 CT---
i Chlorocebus_aethiops.ctg25                             I 69 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7162 2 -     44032 CT---
i Chlorocebus_pygerythrus.k141_3063162                   I 6 C 0
s Chlorocebus_sabaeus.CM001947.1                            301942 2 - 135778131 CT---
i Chlorocebus_sabaeus.CM001947.1                         I 69 C 0
s Erythrocebus_patas.Contig38                               260140 2 +  21539334 CT---
i Erythrocebus_patas.Contig38                            I 36 C 0
s Gorilla_beringei.k141_3358147                               2239 5 -      8343 CTCCt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251729 5 - 186649187 CTCCT
i Gorilla_gorilla.LT578341.1                             C 0 I 47
s Hoolock_leuconedys.ctg274                                    139996 5 -    630532 CTTCT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               2656 5 +     12352 ctcct
i Hylobates_agilis.k141_1155965                          C 0 I 222
s Hylobates_klossii.k141_738755                               9839 5 +     55766 ctcct
i Hylobates_klossii.k141_738755                          C 0 I 222
s Hylobates_pileatus_b.LG02                                       2049486 5 + 191637585 ctcct
i Hylobates_pileatus_b.LG02                                     I 305 T 305
s Hylobates_pileatus_a.tarseq_633                            7798513 5 +  11177569 CTTCT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               330274 5 -   1826925 CTCCT
i Lophocebus_aterrimus.ctg367                            C 0 I 19
s Macaca_arctoides.k141_1757516                              42558 5 -     61512 CTCCT
i Macaca_arctoides.k141_1757516                          C 0 I 33
s Macaca_assamensis.Contig5                                 370186 5 -  60120075 CTCCT
i Macaca_assamensis.Contig5                              C 0 I 33
s Macaca_cyclopis.k119_263443                                22507 5 +     30207 CTCCT
i Macaca_cyclopis.k119_263443                            C 0 I 19
s Macaca_fascicularis.k141_1397292                           19610 5 -     24934 CTCCT
i Macaca_fascicularis.k141_1397292                       C 0 I 15
s Macaca_fuscata.k119_546792                                 22393 5 +     30527 CTCCT
i Macaca_fuscata.k119_546792                             C 0 I 33
s Macaca_leonina.k141_321385                                 33583 5 -     50087 CTCCT
i Macaca_leonina.k141_321385                             C 0 I 33
s Macaca_maura.k141_1103459                                  43321 5 +     51645 CTCCT
i Macaca_maura.k141_1103459                              C 0 I 33
s Macaca_mulatta.NC_041758.1                                411895 5 - 187317192 ctcct
i Macaca_mulatta.NC_041758.1                             C 0 I 660
s Macaca_nigra.k141_2818840                                  45909 5 -     62418 CTCCT
i Macaca_nigra.k141_2818840                              C 0 I 33
s Macaca_siberu.k141_2185972                                 42352 5 +     59329 CTCCT
i Macaca_siberu.k141_2185972                             C 0 I 33
s Macaca_silenus.Contig273                                  268318 5 +    668171 CTCCT
i Macaca_silenus.Contig273                               C 0 I 33
s Macaca_thibetana.k99_41370                                 19532 5 +     21031 CTCCT
i Macaca_thibetana.k99_41370                             C 0 I 33
s Macaca_tonkeana.k141_1880923                               33265 5 +     33478 CTCCT
i Macaca_tonkeana.k141_1880923                           C 0 I 33
s Mandrillus_leucophaeus.scaffold280                        319662 5 +  24302211 CTCCT
i Mandrillus_leucophaeus.scaffold280                     C 0 I 19
s Mandrillus_sphinx.Contig270                               354494 5 -    752769 CTCCT
i Mandrillus_sphinx.Contig270                            C 0 I 19
s Miopithecus_ogouensis.k141_1534655                         19656 2 -     27822 CT---
i Miopithecus_ogouensis.k141_1534655                     C 0 I 7
s Nomascus_annamensis.k141_1771965                           50920 5 -    132029 CTCCT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7015 5 -     16345 CTCCT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12900 5 +     22201 CTCCT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_a.k141_941534                                  23298 5 -     54323 CTCCT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_troglodytes.CM009242.2                               1469118 5 - 189151597 ctcct
i Pan_troglodytes.CM009242.2                             I 4 I 40
s Papio_anubis.CM001495.2                                   240502 5 - 183742232 CTCCT
i Papio_anubis.CM001495.2                                C 0 I 19
s Papio_cynocephalus.k141_1507553                             6966 5 +     21308 CTCCT
i Papio_cynocephalus.k141_1507553                        C 0 I 19
s Papio_hamadryas.Contig39                                  288005 5 -  20919399 CTCCT
i Papio_hamadryas.Contig39                               C 0 I 19
s Papio_kindae.k141_2214839                                  19621 5 -     27687 CTCCT
i Papio_kindae.k141_2214839                              C 0 I 19
s Papio_papio.k141_799093                                    12757 5 +     16796 CTCCT
i Papio_papio.k141_799093                                C 0 I 19
s Papio_ursinus.k141_2278143                                 19567 5 -     23640 CTCCT
i Papio_ursinus.k141_2278143                             C 0 I 19
s Pongo_abelii.CM009266.2                                   174745 5 - 189387572 CTCCT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189743 5 -   9816681 CTCCT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Theropithecus_gelada.CM009954.1                           350488 5 - 186847797 CTCCT
i Theropithecus_gelada.CM009954.1                        C 0 I 19
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21940 16 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     29610 16 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_28053       37358 1 +     38305 I
e Octodon_degus.JH651603.1                                11044930 16 -  11899542 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68897 17 +    143317 I
e Heterocephalus_glaber.JH602082.1                         1924670 2 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  7545 27 +     14636 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   3108 1 -     10735 I
e Dipodomys_ordii.KN672350.1                              18948161 1 -  37912305 I
e Dinomys_branickii.DinBra_scaffold_10381                    95960 16 -    115145 I
e Cuniculus_paca.CunPac_flattened_line_7025                   1228 16 +     36344 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2576 16 +     50838 I
e Cavia_tschudii.CavTsc_scaffold_23560                       60147 18 -     66877 I
e Cavia_porcellus.DS562891.1                               4997046 18 +  23407841 I
e Cavia_aperea.AVPZ01000300.1                              4993604 18 +  23392119 I
e Microgale_talazaci.MicTal_scaffold_6613                    41615 4 +    145209 I
e Echinops_telfairi.JH980293.1                            62851296 4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              11004 4 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862364 4 -  20541912 I
e Pygathrix_nigripes_a.k141_215492                              5156 0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  150779 0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             24286 0 +     91421 C
e Callibella_humilis.k141_1233062                             7786 0 +     18648 C
e Perodicticus_potto.k141_1854441                            15088 3 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          22718 3 +     31479 I
e Otolemur_garnettii.GL873799.1                             349478 3 +   1103335 I
e Otolemur_crassicaudatus.k141_649260                        36464 3 -     51505 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560877 3 - 199412804 I
e Nycticebus_coucang.k141_8166032                             2012 3 +      2758 I
e Nycticebus_bengalensis.LG01                             93632623 3 + 196305487 I
e Loris_tardigradus.ctg83                                  5040992 3 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            7332 3 +     19643 I
e Galagoides_demidoff.k141_561628                            16935 3 -     32986 I
e Galago_senegalensis.k141_991736                             4880 3 +     22493 I
e Galago_moholi.ctg3793                                     121339 3 -    137831 I
e Arctocebus_calabarensis.k141_1364444                       17299 3 -     45910 I
e Allochrocebus_solatus.k141_3554717                         15365 53 +     32033 I
e Allochrocebus_preussi.k141_1993939                         13689 52 -     21945 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17451 4 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107771 4 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10443 4 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2691 4 +      5315 I
e Tupaia_tana.TupTan_flattened_line_394                       5808 3 -     70247 I
e Tupaia_chinensis.KB320699.1                              1831292 3 -   4065304 I
e Zalophus_californianus.ZalCal_flattened_line_17732         26339 4 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                102686 4 -    112863 I
e Ursus_maritimus.KK499267.1                                179292 4 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              4172 4 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2175 4 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        36962 4 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1449119 4 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                195923 4 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11466331 4 -  31847680 I
e Mustela_putorius.JH418006.1                             14352397 4 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         5944 4 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             23457 4 -     74585 I
e Lycaon_pictus.CM007581.1                                41612321 4 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        810934 4 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24913584 4 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45104747 4 -  63665305 I
e Canis_lupus_familiaris.chr16                            41613166 4 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          220031 4 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6688 4 -     23171 I
e CanFam4.chr16                                           42503052 4 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2620 4 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412782 4 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_230229                      1005 4 +      2695 I
e Xerus_inauris.XerIna_scaffold_2302                        171756 10 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Varecia_variegata.k141_289850                              21688 7 -    147434 I
e Varecia_rubra.k141_787544                                  22781 7 -     30710 I
e Uropsilus_gracilis.UroGra_scaffold_7153                   104936 4 -    105689 I
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58524 0 +     59866 C
e Trachypithecus_phayrei.ctg124                             252793 0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                         7554 0 -     13050 C
e Trachypithecus_melamera.k141_591572                          560 0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     7132 0 +     22490 C
e Trachypithecus_laotum.k141_928651                          25689 0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      27652 0 -     64340 C
e Trachypithecus_germaini.k141_57262                          6638 0 -     28527 C
e Trachypithecus_geei.k141_1001272                           25830 0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      25713 0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       17488 0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     30851 0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        18167 0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    477368 4 -    610378 I
e Tarsius_wallacei.k141_226975                                4743 3 +     20590 I
e Tarsius_lariang.k141_1780720                                4704 3 +      6850 I
e Tapirus_terrestris.TapTer_scaffold_755                    103004 4 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      189048 4 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                 331 4 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11352 4 +     22964 I
e Symphalangus_syndactylus.tarseq_199                       388202 0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122226 6 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1865998 11 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1856025 4 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    45953 3 +     77746 I
e Semnopithecus_vetulus.k141_244474                          26025 0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     22956 0 -     29113 C
e Semnopithecus_priam.k141_714795                            20276 0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12618 0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      26122 0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22603 0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113710 4 +    313613 I
e Sapajus_macrocephalus.k141_796559                           5584 0 +     21866 C
e Sapajus_apella.ctg103                                     235994 0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1906 0 -      4301 C
e Saguinus_mystax.k141_8077960                                1540 0 +      5979 C
e Saguinus_midas.LG03                                       388859 0 - 209938924 C
e Saguinus_labiatus.k141_1571581                              1737 0 -      2099 C
e Saguinus_inustus.k141_2469308                               1592 0 +      5932 C
e Saguinus_imperator.k141_1898058                             1538 0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             1519 0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1511 0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72507 0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             233724 0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104119464 0 + 195417433 C
e Rhinopithecus_bieti.k119_221883                            26116 0 +     27361 C
e Rhinolophus_sinicus.LVEH01000134.1                       2911173 4 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096525 4 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3535087 3 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838520 3 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49550 4 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5923 3 +     35169 I
e Propithecus_tattersalli.k141_1127767                       92286 3 -     98465 I
e Propithecus_perrieri.k141_1496898                          32015 3 +     46564 I
e Propithecus_edwardsi.k141_635656                            5690 3 -     30655 I
e Propithecus_diadema.k141_153680                             1954 3 -     11706 I
e Propithecus_coronatus.k141_209299                           1357 3 -      7103 I
e Propithecus_coquerelli.NW_012148875.1                    1563721 3 -   2598838 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42090 0 -     80239 C
e Presbytis_comata.k141_1230337                              24895 0 +     69807 C
e Plecturocebus_moloch.k141_1031110                          41735 0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          40267 0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      12351 0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          5415 0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          40372 0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          5418 0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     40719 0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       40326 0 -     87950 C
e Plecturocebus_brunneus.k141_862875                           922 0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        5837 0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29406 0 +     51125 C
e Pithecia_pithecia.tarseq_165                              554412 0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           29422 0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         29659 0 +     63561 C
e Pithecia_hirsuta.k141_640380                               29383 0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          3665 0 -     25401 C
e Pithecia_albicans.k141_1239476                             62548 0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              511 4 +     22231 I
e Piliocolobus_tephrosceles.PDMG02034973.1                    2398 0 +      5735 C
e Piliocolobus_kirkii.k141_579682                            44720 0 +     45295 C
e Piliocolobus_gordonorum.k141_905727                        62121 0 -     63152 C
e Piliocolobus_badius.k141_2495623                            6413 0 +      7560 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244386 3 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12537 6 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969925 4 +   8748460 I
e Panthera_pardus.KV860321.1                              18459205 4 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   21879 4 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104740 3 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    89906 3 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_b.tarseq_93                            8411230 0 -  22158432 C
e Noctilio_leporinus.NocLep_scaffold_7894                   125132 0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26262 0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117213 4 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380573 4 +   4330536 I
e Myotis_davidii.KB100139.1                                4384751 4 +   6019432 I
e Myotis_brandtii.KE162005.1                               9790352 4 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36336 4 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   15815 6 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176484 4 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mirza_zaza.k141_766280                                     50064 3 -     62432 I
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182307 4 +    200668 I
e Microcebus_murinus.CM007674.1                           74982240 7 +  93316391 I
e Mico_schneideri.k141_1877700                                     16293 0 -     26561 C
e Mico_humeralifer.k141_1180625                               8342 0 -     12984 C
e Mico_argentatus.k141_582562                                 7558 0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148081 4 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7498628 11 +  40650429 I
e Manis_pentadactyla.KN006162.1                             218460 4 +    317179 I
e Manis_javanica.JSZB01003497.1                             671169 4 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                220890 4 -    270270 I
e Macaca_radiata.k141_3557992                                22590 12 +     24253 I
e Macaca_nemestrina.KQ007038.1                              396771 12 +  25927173 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6629 7 +     16388 I
e Lepilemur_ruficaudatus.k141_330196                          6635 7 +     24756 I
e Lepilemur_dorsalis.k141_387009                              6625 7 +     31569 I
e Lepilemur_ankaranensis.k141_567626                          6628 7 +     29618 I
e Leontopithecus_rosalia.k141_349454                          9194 0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     7813 0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        1180 0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           1549 0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        1598 0 -     13097 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59465 4 -     65777 I
e Lagothrix_lagothricha.k141_246028                          40918 0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236848 3 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Indri_indri.k141_4600452                                    1336 7 -      1527 I
e Ictidomys_tridecemlineatus.JH393364.1                     384429 11 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66538 6 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_23202               47141 4 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547825 4 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28061 6 -    327341 I
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16686 3 +     18121 I
e Felis_nigripes.FelNig_flattened_line_31944                 25058 4 -     30238 I
e Felis_catus_fca126.CM031415.1                          185113710 4 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Equus_przewalskii.KK951119.1                              409789 4 -    498745 I
e Equus_caballus.CM000403.2                               21373003 4 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3039069 4 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12575988 4 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           10154 3 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          28190 3 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3924 4 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  136872 4 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662087 4 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290246 0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    642497 3 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1552 6 +     87169 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 39957 3 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           375 4 -      8242 I
e Condylura_cristata.JH655891.1                           35804944 3 +  53390261 I
e Colobus_polykomos.k141_1559707                              6308 0 -      6605 C
e Colobus_guereza.LG01                                      375570 726 - 200372422 I
e Colobus_angolensis.KN981557.1                             406419 0 -   2368649 C
e Chiropotes_sagulatus.k141_1113111                           5770 0 +     34062 C
e Chiropotes_israelita.k141_313004                           40198 0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           1513 0 +      5346 C
e Cheracebus_torquatus.k141_890198                           17127 0 +     39636 C
e Cheracebus_regulus.k141_471822                             17343 0 +    216457 C
e Cheracebus_lugens.k141_1179667                             17079 0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             6666 0 -     32913 C
e Cheirogaleus_medius.k141_759766                             2802 7 -     15404 I
e Cheirogaleus_major.k141_666340                             28272 7 -     33796 I
e Cercopithecus_diana.k141_132293                             9127 0 -     17524 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16628 4 +     27315 I
e Cephalopachus_bancanus.k141_72622                           1184 3 -      1636 I
e Cebus_unicolor.k141_1654760                                64754 0 -     89041 C
e Cebus_olivaceus.k141_1404781                                5659 0 -     34880 C
e Cebus_albifrons.Contig27                                  368770 0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               40567 0 +     53515 C
e Cebuella_niveiventris.k141_592277                           2681 0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20044 3 -     39886 I
e Carlito_syrichta.NW_007259797.1                           268012 3 +    496798 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17395 0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165451102 0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           16147 0 +     17162 C
e Callimico_goeldii.k141_1609886                              7457 0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         18291 0 +    119600 C
e Cacajao_hosomi.k141_81245                                  18378 0 +     95584 C
e Cacajao_calvus.k141_89051                                  40852 0 -     91139 C
e Cacajao_ayresi.k141_96119                                   5558 0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3839 7 -     19611 I
e Avahi_laniger.k141_2756659                                  3838 7 +     11645 I
e Ateles_paniscus.k141_866194                                20662 0 -     33135 C
e Ateles_marginatus.k141_970259                              46603 0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              31232 0 +     44353 C
e Ateles_chamek.k141_615173                                   3679 0 -     28759 C
e Ateles_belzebuth.k141_1572163                               8542 0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               272375 0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      13677 11 -     32367 I
e Aotus_vociferans.k141_944972                                6929 0 +      8415 C
e Aotus_trivirgatus.k141_192090                              21793 0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                670151 0 +   5030052 C
e Aotus_griseimembra.k141_982342                             42138 0 +     43593 C
e Aotus_azarae.k141_118258                                   48391 0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174335 4 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30576 0 +     42133 C
e Alouatta_puruensis.k141_251022                              6437 0 +     30854 C
e Alouatta_palliata.k141_638677                              44312 0 +     70886 C
e Alouatta_nigerrima.k141_376068                             38614 0 +     45454 C
e Alouatta_macconnelli.k141_361275                           21631 0 -     24835 C
e Alouatta_juara.k141_1687208                                39985 0 -     64179 C
e Alouatta_discolor.k141_2561099                             41547 0 +     55831 C
e Alouatta_caraya.k141_1109140                               42097 0 -     78289 C
e Alouatta_belzebul.k141_1011583                             69868 0 -     84148 C
e Allenopithecus_nigroviridis.k141_3755588                   45153 0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    15690 3 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810263 4 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1882 40 +     36723 TCACCACCATAGAGTTAGAtggcttctgcagatatggcta
s Allenopithecus_nigroviridis.k141_3755588                   45153  1 +     53615 --------------------a-------------------
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41054 21 +     44087 TTCCCACCACAGAATTAGATA-------------------
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24980 12 -     40656 TTCCCACCACAG----------------------------
i Cercopithecus_ascanius.k141_3120866                    I 36 C 0
s Cercopithecus_cephus.k141_4183004                           4916 21 +     20796 TTCCCACCACAGAGTTAGATA-------------------
i Cercopithecus_cephus.k141_4183004                      I 36 C 0
s Cercopithecus_hamlyni.k141_566925                          24843  6 -     34525 ---------------TAGATA-------------------
i Cercopithecus_hamlyni.k141_566925                      I 18 C 0
s Cercopithecus_lowei.k141_2101310                            9552  6 -     25376 ---------------TAGATA-------------------
i Cercopithecus_lowei.k141_2101310                       I 18 C 0
s Cercopithecus_albogularis.ctg5                                  362136 21 -  39242232 TTCCCACCACAGAATTAGATA-------------------
i Cercopithecus_albogularis.ctg5                               I 36 C 0
s Cercopithecus_mona.ctg39                                  267859  6 +  21565898 ---------------TAGATA-------------------
i Cercopithecus_mona.ctg39                               I 15 C 0
s Cercopithecus_neglectus.k141_858615                        29320  6 -     45857 ---------------TAGATA-------------------
i Cercopithecus_neglectus.k141_858615                    I 18 C 0
s Cercopithecus_nictitans.k141_2995370                       25125 21 -     32606 TTCCCACCACAGAATTAGATA-------------------
i Cercopithecus_nictitans.k141_2995370                   I 36 C 0
s Cercopithecus_petaurista.k141_42573                         1282 17 +      8499 ----CACCACAGAATTAGATA-------------------
i Cercopithecus_petaurista.k141_42573                    I 7 C 0
s Cercopithecus_pogonias.k141_6079                           22812  6 +     70610 ---------------TAGATA-------------------
i Cercopithecus_pogonias.k141_6079                       I 18 C 0
s Cercopithecus_roloway.k141_3012935                         19722 21 +     36323 TTCCCACCACAGAATTAGACA-------------------
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chlorocebus_aethiops.ctg25                                340619 21 +  18827391 TTCCCACCACAGAATTAGATA-------------------
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7164 21 -     44032 TTCCCACCACAGAATTAGATA-------------------
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301944 21 - 135778131 TTCCCACCACAGAATTAGATA-------------------
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406419  1 -   2368649 --------------------G-------------------
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376296  1 - 200372422 --------------------G-------------------
i Colobus_guereza.LG01                                   I 726 C 0
s Colobus_polykomos.k141_1559707                              6308  1 -      6605 --------------------G-------------------
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Erythrocebus_patas.Contig38                               260142 21 +  21539334 TTCCCACCACAGAATTAGATA-------------------
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3358147                               2244 40 -      8343 tcaccaccatagaattagatggcttctgcagatacagcta
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 67784 40 +  33314783 TCACCACCATAGAATTagatggcttctgcagatacagcta
i Gorilla_gorilla.LT578336.1                             I 290 C 0
s Hoolock_leuconedys.ctg274                                    140001 40 -    630532 TCACCACCATAGGATTAGGTGGCTTCTGCAGATACAGCTA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               2883 40 +     12352 tcaccaccataggattaggtggcttctgcagatacagcta
i Hylobates_agilis.k141_1155965                          I 222 T 50
s Hylobates_klossii.k141_738755                              10066 40 +     55766 tcaccaccataggattaggtggcttctgcagatacagcta
i Hylobates_klossii.k141_738755                          I 222 I 154
s Hylobates_pileatus_b.LG02                                       2049186 40 + 191637585 tcgccaccatagaattaggtggcttctgcagatacagcta
i Hylobates_pileatus_b.LG02                                     T 305 I 154
s Hylobates_pileatus_a.tarseq_633                            7798518 40 +  11177569 TCGCCACCATAGAATTAGGTGGCTTCTGCAGATACAGCTA
i Hylobates_pileatus_a.tarseq_633                          C 0 I 175
s Macaca_arctoides.k141_1757516                              42596 19 -     61512 TTCCCACCACAGAATTAGA---------------------
i Macaca_arctoides.k141_1757516                          I 33 C 0
s Macaca_assamensis.Contig5                                 370224 21 -  60120075 TTCCCACCACAGAATTAGATA-------------------
i Macaca_assamensis.Contig5                              I 33 C 0
s Macaca_fuscata.k119_546792                                 22431 21 +     30527 TTCCCACCACAGAATTAGATA-------------------
i Macaca_fuscata.k119_546792                             I 33 C 0
s Macaca_leonina.k141_321385                                 33621 21 -     50087 TTCCCACCGCAGAATTAGATA-------------------
i Macaca_leonina.k141_321385                             I 33 C 0
s Macaca_maura.k141_1103459                                  43359 21 +     51645 TTCCCACCACAGAATTAGATA-------------------
i Macaca_maura.k141_1103459                              I 33 C 0
s Macaca_mulatta.NC_041758.1                                412560 21 - 187317192 ttcccgccgcagaattagata-------------------
i Macaca_mulatta.NC_041758.1                             I 660 C 0
s Macaca_nemestrina.KQ007038.1                              396783 21 +  25927173 TTCCCACCGCAGAATTAGATA-------------------
i Macaca_nemestrina.KQ007038.1                           I 12 C 0
s Macaca_nigra.k141_2818840                                  45947 21 -     62418 TTCCCACCACAGAATTAGATA-------------------
i Macaca_nigra.k141_2818840                              I 33 C 0
s Macaca_radiata.k141_3557992                                22602 21 +     24253 TTCCCACCACAGAATTAGATA-------------------
i Macaca_radiata.k141_3557992                            I 12 C 0
s Macaca_siberu.k141_2185972                                 42390 21 +     59329 TTCCCACCGCAGAATTAGATA-------------------
i Macaca_siberu.k141_2185972                             I 33 C 0
s Macaca_silenus.Contig273                                  268356 21 +    668171 TTCCCACCGCAGAATTAGATA-------------------
i Macaca_silenus.Contig273                               I 33 C 0
s Macaca_thibetana.k99_41370                                 19570 19 +     21031 TTCCCACCACAGAATTAGA---------------------
i Macaca_thibetana.k99_41370                             I 33 C 0
s Macaca_tonkeana.k141_1880923                               33303 21 +     33478 TTCCCACCGCAGAATTAGATA-------------------
i Macaca_tonkeana.k141_1880923                           I 33 C 0
s Miopithecus_ogouensis.k141_1534655                         19665 17 -     27822 ----CACTACAGAATTAGATA-------------------
i Miopithecus_ogouensis.k141_1534655                     I 7 C 0
s Nasalis_larvatus.k141_1350636                              26262  1 +     34575 --------------------G-------------------
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           50925 40 -    132029 TCACCACCATAGGATTAGGTGGCTTCTGCAGATACAGCTA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7020 40 -     16345 TCACCACCATAGGATTAGGTGGCTTCTGCAGATACAGCTA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12905 40 +     22201 TCACCACCATAGGATTAGGTGGCTTCTGCAGATACAGCTA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_a.k141_941534                                  23303 40 -     54323 TCACCACCATAGGATTAGGTGGCTTCTGCAGATACAGCTA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_troglodytes.KZ622849.1                                 30203 40 -    110857 tcaccaccatagaattagatggcttctgcagatacagcta
i Pan_troglodytes.KZ622849.1                             I 5 I 7
s Piliocolobus_badius.k141_2495623                            6413  1 +      7560 --------------------G-------------------
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62121  1 -     63152 --------------------G-------------------
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44720  1 +     45295 --------------------G-------------------
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2398  1 +      5735 --------------------G-------------------
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pongo_abelii.CM009266.2                                   174750 40 - 189387572 TCACCACCATagaattagatggtttctgcagatacggcta
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189748 40 -   9816681 TCACCACCATAGAATTAGATGGTTTCTGCAGATACGGCTA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24895  1 +     69807 --------------------G-------------------
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42090  1 -     80239 --------------------G-------------------
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24286  1 +     91421 --------------------G-------------------
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150779  1 -   7812017 --------------------G-------------------
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5156  1 +     72585 --------------------G-------------------
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26116  1 +     27361 --------------------G-------------------
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119464  1 + 195417433 --------------------G-------------------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233724  1 -   7961872 --------------------G-------------------
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_158471                         22603  1 +     27374 --------------------G-------------------
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26122  1 +     58920 --------------------G-------------------
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12618  1 -     45317 --------------------G-------------------
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20276  1 -     42441 --------------------G-------------------
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22956  1 -     29113 --------------------G-------------------
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26025  1 -     48123 --------------------G-------------------
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18167  1 +     26378 --------------------G-------------------
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30851  1 -     78344 --------------------G-------------------
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17488  1 +     25722 --------------------G-------------------
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25713  1 -     62838 --------------------G-------------------
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25830  1 +     46913 --------------------G-------------------
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6638  1 -     28527 --------------------G-------------------
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27652  1 -     64340 --------------------G-------------------
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25689  1 -     63452 --------------------G-------------------
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7132  1 +     22490 --------------------G-------------------
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          560  1 -      6147 --------------------G-------------------
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7554  1 -     13050 --------------------G-------------------
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252793  1 -   6242583 --------------------G-------------------
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58524  1 +     59866 --------------------G-------------------
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21940 16 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     29610 16 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_28053       37358  1 +     38305 I
e Octodon_degus.JH651603.1                                11044930 16 -  11899542 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68897 17 +    143317 I
e Heterocephalus_glaber.JH602082.1                         1924670  2 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  7545 27 +     14636 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   3108  1 -     10735 I
e Dipodomys_ordii.KN672350.1                              18948161  1 -  37912305 I
e Dinomys_branickii.DinBra_scaffold_10381                    95960 16 -    115145 I
e Cuniculus_paca.CunPac_flattened_line_7025                   1228 16 +     36344 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2576 16 +     50838 I
e Cavia_tschudii.CavTsc_scaffold_23560                       60147 18 -     66877 I
e Cavia_porcellus.DS562891.1                               4997046 18 +  23407841 I
e Cavia_aperea.AVPZ01000300.1                              4993604 18 +  23392119 I
e Microgale_talazaci.MicTal_scaffold_6613                    41615  4 +    145209 I
e Echinops_telfairi.JH980293.1                            62851296  4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              11004  4 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862364  4 -  20541912 I
e Callibella_humilis.k141_1233062                             7786  0 +     18648 C
e Perodicticus_potto.k141_1854441                            15088  3 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          22718  3 +     31479 I
e Otolemur_garnettii.GL873799.1                             349478  3 +   1103335 I
e Otolemur_crassicaudatus.k141_649260                        36464  3 -     51505 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560877  3 - 199412804 I
e Nycticebus_coucang.k141_8166032                             2012  3 +      2758 I
e Nycticebus_bengalensis.LG01                             93632623  3 + 196305487 I
e Loris_tardigradus.ctg83                                  5040992  3 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            7332  3 +     19643 I
e Galagoides_demidoff.k141_561628                            16935  3 -     32986 I
e Galago_senegalensis.k141_991736                             4880  3 +     22493 I
e Galago_moholi.ctg3793                                     121339  3 -    137831 I
e Arctocebus_calabarensis.k141_1364444                       17299  3 -     45910 I
e Allochrocebus_solatus.k141_3554717                         15365 53 +     32033 I
e Allochrocebus_preussi.k141_1993939                         13689 52 -     21945 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17451  4 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107771  4 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10443  4 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2691  4 +      5315 I
e Tupaia_tana.TupTan_flattened_line_394                       5808  3 -     70247 I
e Tupaia_chinensis.KB320699.1                              1831292  3 -   4065304 I
e Zalophus_californianus.ZalCal_flattened_line_17732         26339  4 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                102686  4 -    112863 I
e Ursus_maritimus.KK499267.1                                179292  4 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              4172  4 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2175  4 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        36962  4 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1449119  4 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                195923  4 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11466331  4 -  31847680 I
e Mustela_putorius.JH418006.1                             14352397  4 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         5944  4 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             23457  4 -     74585 I
e Lycaon_pictus.CM007581.1                                41612321  4 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        810934  4 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24913584  4 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45104747  4 -  63665305 I
e Canis_lupus_familiaris.chr16                            41613166  4 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          220031  4 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6688  4 -     23171 I
e CanFam4.chr16                                           42503052  4 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2620  4 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412782  4 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_230229                      1005  4 +      2695 I
e Xerus_inauris.XerIna_scaffold_2302                        171756 10 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Varecia_variegata.k141_289850                              21688  7 -    147434 I
e Varecia_rubra.k141_787544                                  22781  7 -     30710 I
e Uropsilus_gracilis.UroGra_scaffold_7153                   104936  4 -    105689 I
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    477368  4 -    610378 I
e Theropithecus_gelada.CM009954.1                           350493 19 - 186847797 I
e Tarsius_wallacei.k141_226975                                4743  3 +     20590 I
e Tarsius_lariang.k141_1780720                                4704  3 +      6850 I
e Tapirus_terrestris.TapTer_scaffold_755                    103004  4 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      189048  4 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                 331  4 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11352  4 +     22964 I
e Symphalangus_syndactylus.tarseq_199                       388202  0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122226  6 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1865998 11 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1856025  4 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    45953  3 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113710  4 +    313613 I
e Sapajus_macrocephalus.k141_796559                           5584  0 +     21866 C
e Sapajus_apella.ctg103                                     235994  0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1906  0 -      4301 C
e Saguinus_mystax.k141_8077960                                1540  0 +      5979 C
e Saguinus_midas.LG03                                       388859  0 - 209938924 C
e Saguinus_labiatus.k141_1571581                              1737  0 -      2099 C
e Saguinus_inustus.k141_2469308                               1592  0 +      5932 C
e Saguinus_imperator.k141_1898058                             1538  0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             1519  0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1511  0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72507  0 -    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                       2911173  4 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096525  4 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3535087  3 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838520  3 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49550  4 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5923  3 +     35169 I
e Propithecus_tattersalli.k141_1127767                       92286  3 -     98465 I
e Propithecus_perrieri.k141_1496898                          32015  3 +     46564 I
e Propithecus_edwardsi.k141_635656                            5690  3 -     30655 I
e Propithecus_diadema.k141_153680                             1954  3 -     11706 I
e Propithecus_coronatus.k141_209299                           1357  3 -      7103 I
e Propithecus_coquerelli.NW_012148875.1                    1563721  3 -   2598838 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Plecturocebus_moloch.k141_1031110                          41735  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          40267  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      12351  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          5415  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          40372  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          5418  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     40719  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       40326  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                           922  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        5837  0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29406  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              554412  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           29422  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         29659  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               29383  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          3665  0 -     25401 C
e Pithecia_albicans.k141_1239476                             62548  0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              511  4 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244386  3 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12537  6 +     78924 I
e Papio_ursinus.k141_2278143                                 19572 19 -     23640 I
e Papio_papio.k141_799093                                    12762 19 +     16796 I
e Papio_kindae.k141_2214839                                  19626 19 -     27687 I
e Papio_hamadryas.Contig39                                  288010 19 -  20919399 I
e Papio_cynocephalus.k141_1507553                             6971 19 +     21308 I
e Papio_anubis.CM001495.2                                   240507 19 - 183742232 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969925  4 +   8748460 I
e Panthera_pardus.KV860321.1                              18459205  4 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   21879  4 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104740  3 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    89906  3 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_b.tarseq_93                            8411230  0 -  22158432 C
e Noctilio_leporinus.NocLep_scaffold_7894                   125132  0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117213  4 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380573  4 +   4330536 I
e Myotis_davidii.KB100139.1                                4384751  4 +   6019432 I
e Myotis_brandtii.KE162005.1                               9790352  4 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36336  4 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   15815  6 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176484  4 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50064  3 -     62432 I
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182307  4 +    200668 I
e Microcebus_murinus.CM007674.1                           74982240  7 +  93316391 I
e Mico_schneideri.k141_1877700                                     16293  0 -     26561 C
e Mico_humeralifer.k141_1180625                               8342  0 -     12984 C
e Mico_argentatus.k141_582562                                 7558  0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148081  4 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7498628 11 +  40650429 I
e Manis_pentadactyla.KN006162.1                             218460  4 +    317179 I
e Manis_javanica.JSZB01003497.1                             671169  4 -    737560 I
e Mandrillus_sphinx.Contig270                               354499 19 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        319667 19 +  24302211 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                220890  4 -    270270 I
e Macaca_fascicularis.k141_1397292                           19615 15 -     24934 I
e Macaca_cyclopis.k119_263443                                22512 19 +     30207 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330279 19 -   1826925 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6629  7 +     16388 I
e Lepilemur_ruficaudatus.k141_330196                          6635  7 +     24756 I
e Lepilemur_dorsalis.k141_387009                              6625  7 +     31569 I
e Lepilemur_ankaranensis.k141_567626                          6628  7 +     29618 I
e Leontopithecus_rosalia.k141_349454                          9194  0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     7813  0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        1180  0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           1549  0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        1598  0 -     13097 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59465  4 -     65777 I
e Lagothrix_lagothricha.k141_246028                          40918  0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236848  3 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Indri_indri.k141_4600452                                    1336  7 -      1527 I
e Ictidomys_tridecemlineatus.JH393364.1                     384429 11 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66538  6 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_23202               47141  4 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547825  4 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28061  6 -    327341 I
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16686  3 +     18121 I
e Felis_nigripes.FelNig_flattened_line_31944                 25058  4 -     30238 I
e Felis_catus_fca126.CM031415.1                          185113710  4 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Equus_przewalskii.KK951119.1                              409789  4 -    498745 I
e Equus_caballus.CM000403.2                               21373003  4 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3039069  4 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12575988  4 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           10154  3 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          28190  3 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3924  4 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  136872  4 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662087  4 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290246  0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    642497  3 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1552  6 +     87169 I
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 39957  3 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           375  4 -      8242 I
e Condylura_cristata.JH655891.1                           35804944  3 +  53390261 I
e Chiropotes_sagulatus.k141_1113111                           5770  0 +     34062 C
e Chiropotes_israelita.k141_313004                           40198  0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           1513  0 +      5346 C
e Cheracebus_torquatus.k141_890198                           17127  0 +     39636 C
e Cheracebus_regulus.k141_471822                             17343  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             17079  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             6666  0 -     32913 C
e Cheirogaleus_medius.k141_759766                             2802  7 -     15404 I
e Cheirogaleus_major.k141_666340                             28272  7 -     33796 I
e Cercopithecus_diana.k141_132293                             9127  0 -     17524 C
e Cercocebus_torquatus.k141_2159127                          41882 19 -    148725 I
e Cercocebus_lunulatus.k141_2779015                          41899 19 -     44860 I
e Cercocebus_chrysogaster.k141_1522556                       42066 19 +     47900 I
e Cercocebus_atys.KQ010504.1                                138326 19 -   4669795 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16628  4 +     27315 I
e Cephalopachus_bancanus.k141_72622                           1184  3 -      1636 I
e Cebus_unicolor.k141_1654760                                64754  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                5659  0 -     34880 C
e Cebus_albifrons.Contig27                                  368770  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               40567  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           2681  0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20044  3 -     39886 I
e Carlito_syrichta.NW_007259797.1                           268012  3 +    496798 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17395  0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165451102  0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           16147  0 +     17162 C
e Callimico_goeldii.k141_1609886                              7457  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         18291  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  18378  0 +     95584 C
e Cacajao_calvus.k141_89051                                  40852  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   5558  0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3839  7 -     19611 I
e Avahi_laniger.k141_2756659                                  3838  7 +     11645 I
e Ateles_paniscus.k141_866194                                20662  0 -     33135 C
e Ateles_marginatus.k141_970259                              46603  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              31232  0 +     44353 C
e Ateles_chamek.k141_615173                                   3679  0 -     28759 C
e Ateles_belzebuth.k141_1572163                               8542  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               272375  0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      13677 11 -     32367 I
e Aotus_vociferans.k141_944972                                6929  0 +      8415 C
e Aotus_trivirgatus.k141_192090                              21793  0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                670151  0 +   5030052 C
e Aotus_griseimembra.k141_982342                             42138  0 +     43593 C
e Aotus_azarae.k141_118258                                   48391  0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174335  4 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30576  0 +     42133 C
e Alouatta_puruensis.k141_251022                              6437  0 +     30854 C
e Alouatta_palliata.k141_638677                              44312  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             38614  0 +     45454 C
e Alouatta_macconnelli.k141_361275                           21631  0 -     24835 C
e Alouatta_juara.k141_1687208                                39985  0 -     64179 C
e Alouatta_discolor.k141_2561099                             41547  0 +     55831 C
e Alouatta_caraya.k141_1109140                               42097  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             69868  0 -     84148 C
e Allactaga_bullata.AllBul_scaffold_20030                    15690  3 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810263  4 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1922 7 +     36723 aatcttc
s Gorilla_beringei.k141_3358147                               2284 7 -      8343 agtcttc
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 67824 7 +  33314783 agtcttc
i Gorilla_gorilla.LT578336.1                             C 0 I 158
s Hoolock_leuconedys.ctg274                                    140041 7 -    630532 AGTCTTC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               2873 6 +     12352 -gtcttc
i Hylobates_agilis.k141_1155965                          T 50 I 204
s Hylobates_klossii.k141_738755                              10260 6 +     55766 -gtcttc
i Hylobates_klossii.k141_738755                          I 154 C 0
s Hylobates_pileatus_b.LG02                                       2049380 5 + 191637585 --tcttc
i Hylobates_pileatus_b.LG02                                     I 154 C 0
s Hylobates_pileatus_a.tarseq_633                            7798733 7 +  11177569 AGTCTTC
i Hylobates_pileatus_a.tarseq_633                          I 175 C 0
s Nomascus_annamensis.k141_1771965                           50965 7 -    132029 AGTCTTC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7060 7 -     16345 AGTCTTC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12945 7 +     22201 AGTCTTC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411230 6 -  22158432 -GTCTTC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23343 7 -     54323 AGTCTTC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_troglodytes.CM009242.2                               1469163 7 - 189151597 agtcttc
i Pan_troglodytes.CM009242.2                             I 40 I 561
s Pongo_abelii.CM009266.2                                   174790 7 - 189387572 agtCTTC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189788 7 -   9816681 AGTCTTC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388202 6 +   1523678 -GTCTTC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21940 16 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     29610 16 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_28053       37358 1 +     38305 I
e Octodon_degus.JH651603.1                                11044930 16 -  11899542 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68897 17 +    143317 I
e Heterocephalus_glaber.JH602082.1                         1924670 2 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  7545 27 +     14636 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   3108 1 -     10735 I
e Dipodomys_ordii.KN672350.1                              18948161 1 -  37912305 I
e Dinomys_branickii.DinBra_scaffold_10381                    95960 16 -    115145 I
e Cuniculus_paca.CunPac_flattened_line_7025                   1228 16 +     36344 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2576 16 +     50838 I
e Cavia_tschudii.CavTsc_scaffold_23560                       60147 18 -     66877 I
e Cavia_porcellus.DS562891.1                               4997046 18 +  23407841 I
e Cavia_aperea.AVPZ01000300.1                              4993604 18 +  23392119 I
e Microgale_talazaci.MicTal_scaffold_6613                    41615 4 +    145209 I
e Echinops_telfairi.JH980293.1                            62851296 4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              11004 4 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862364 4 -  20541912 I
e Pygathrix_nigripes_a.k141_215492                              5157 0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  150780 0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             24287 0 +     91421 C
e Callibella_humilis.k141_1233062                             7786 0 +     18648 C
e Perodicticus_potto.k141_1854441                            15088 3 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          22718 3 +     31479 I
e Otolemur_garnettii.GL873799.1                             349478 3 +   1103335 I
e Otolemur_crassicaudatus.k141_649260                        36464 3 -     51505 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560877 3 - 199412804 I
e Nycticebus_coucang.k141_8166032                             2012 3 +      2758 I
e Nycticebus_bengalensis.LG01                             93632623 3 + 196305487 I
e Loris_tardigradus.ctg83                                  5040992 3 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            7332 3 +     19643 I
e Galagoides_demidoff.k141_561628                            16935 3 -     32986 I
e Galago_senegalensis.k141_991736                             4880 3 +     22493 I
e Galago_moholi.ctg3793                                     121339 3 -    137831 I
e Arctocebus_calabarensis.k141_1364444                       17299 3 -     45910 I
e Allochrocebus_solatus.k141_3554717                         15365 53 +     32033 I
e Allochrocebus_preussi.k141_1993939                         13689 52 -     21945 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17451 4 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2107771 4 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10443 4 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2691 4 +      5315 I
e Tupaia_tana.TupTan_flattened_line_394                       5808 3 -     70247 I
e Tupaia_chinensis.KB320699.1                              1831292 3 -   4065304 I
e Zalophus_californianus.ZalCal_flattened_line_17732         26339 4 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                102686 4 -    112863 I
e Ursus_maritimus.KK499267.1                                179292 4 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              4172 4 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2175 4 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        36962 4 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1449119 4 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                195923 4 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11466331 4 -  31847680 I
e Mustela_putorius.JH418006.1                             14352397 4 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         5944 4 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             23457 4 -     74585 I
e Lycaon_pictus.CM007581.1                                41612321 4 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        810934 4 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24913584 4 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45104747 4 -  63665305 I
e Canis_lupus_familiaris.chr16                            41613166 4 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          220031 4 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6688 4 -     23171 I
e CanFam4.chr16                                           42503052 4 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2620 4 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412782 4 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_230229                      1005 4 +      2695 I
e Xerus_inauris.XerIna_scaffold_2302                        171756 10 -    224448 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Varecia_variegata.k141_289850                              21688 7 -    147434 I
e Varecia_rubra.k141_787544                                  22781 7 -     30710 I
e Uropsilus_gracilis.UroGra_scaffold_7153                   104936 4 -    105689 I
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58525 0 +     59866 C
e Trachypithecus_phayrei.ctg124                             252794 0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                         7555 0 -     13050 C
e Trachypithecus_melamera.k141_591572                          561 0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     7133 0 +     22490 C
e Trachypithecus_laotum.k141_928651                          25690 0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      27653 0 -     64340 C
e Trachypithecus_germaini.k141_57262                          6639 0 -     28527 C
e Trachypithecus_geei.k141_1001272                           25831 0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      25714 0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       17489 0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     30852 0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        18168 0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    477368 4 -    610378 I
e Theropithecus_gelada.CM009954.1                           350493 19 - 186847797 I
e Tarsius_wallacei.k141_226975                                4743 3 +     20590 I
e Tarsius_lariang.k141_1780720                                4704 3 +      6850 I
e Tapirus_terrestris.TapTer_scaffold_755                    103004 4 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      189048 4 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                 331 4 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11352 4 +     22964 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122226 6 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1865998 11 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1856025 4 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    45953 3 +     77746 I
e Semnopithecus_vetulus.k141_244474                          26026 0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     22957 0 -     29113 C
e Semnopithecus_priam.k141_714795                            20277 0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12619 0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      26123 0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22604 0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113710 4 +    313613 I
e Sapajus_macrocephalus.k141_796559                           5584 0 +     21866 C
e Sapajus_apella.ctg103                                     235994 0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1906 0 -      4301 C
e Saguinus_mystax.k141_8077960                                1540 0 +      5979 C
e Saguinus_midas.LG03                                       388859 0 - 209938924 C
e Saguinus_labiatus.k141_1571581                              1737 0 -      2099 C
e Saguinus_inustus.k141_2469308                               1592 0 +      5932 C
e Saguinus_imperator.k141_1898058                             1538 0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             1519 0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1511 0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72507 0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             233725 0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104119465 0 + 195417433 C
e Rhinopithecus_bieti.k119_221883                            26117 0 +     27361 C
e Rhinolophus_sinicus.LVEH01000134.1                       2911173 4 +   3329780 I
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096525 4 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3535087 3 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838520 3 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49550 4 -     66298 I
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5923 3 +     35169 I
e Propithecus_tattersalli.k141_1127767                       92286 3 -     98465 I
e Propithecus_perrieri.k141_1496898                          32015 3 +     46564 I
e Propithecus_edwardsi.k141_635656                            5690 3 -     30655 I
e Propithecus_diadema.k141_153680                             1954 3 -     11706 I
e Propithecus_coronatus.k141_209299                           1357 3 -      7103 I
e Propithecus_coquerelli.NW_012148875.1                    1563721 3 -   2598838 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42091 0 -     80239 C
e Presbytis_comata.k141_1230337                              24896 0 +     69807 C
e Plecturocebus_moloch.k141_1031110                          41735 0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          40267 0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      12351 0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          5415 0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          40372 0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          5418 0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     40719 0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       40326 0 -     87950 C
e Plecturocebus_brunneus.k141_862875                           922 0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        5837 0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29406 0 +     51125 C
e Pithecia_pithecia.tarseq_165                              554412 0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           29422 0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         29659 0 +     63561 C
e Pithecia_hirsuta.k141_640380                               29383 0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          3665 0 -     25401 C
e Pithecia_albicans.k141_1239476                             62548 0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              511 4 +     22231 I
e Piliocolobus_tephrosceles.PDMG02034973.1                    2399 0 +      5735 C
e Piliocolobus_kirkii.k141_579682                            44721 0 +     45295 C
e Piliocolobus_gordonorum.k141_905727                        62122 0 -     63152 C
e Piliocolobus_badius.k141_2495623                            6414 0 +      7560 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244386 3 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12537 6 +     78924 I
e Papio_ursinus.k141_2278143                                 19572 19 -     23640 I
e Papio_papio.k141_799093                                    12762 19 +     16796 I
e Papio_kindae.k141_2214839                                  19626 19 -     27687 I
e Papio_hamadryas.Contig39                                  288010 19 -  20919399 I
e Papio_cynocephalus.k141_1507553                             6971 19 +     21308 I
e Papio_anubis.CM001495.2                                   240507 19 - 183742232 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969925 4 +   8748460 I
e Panthera_pardus.KV860321.1                              18459205 4 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   21879 4 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104740 3 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    89906 3 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125132 0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26263 0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117213 4 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380573 4 +   4330536 I
e Myotis_davidii.KB100139.1                                4384751 4 +   6019432 I
e Myotis_brandtii.KE162005.1                               9790352 4 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36336 4 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   15815 6 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176484 4 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mirza_zaza.k141_766280                                     50064 3 -     62432 I
e Miopithecus_ogouensis.k141_1534655                         19682 0 -     27822 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182307 4 +    200668 I
e Microcebus_murinus.CM007674.1                           74982240 7 +  93316391 I
e Mico_schneideri.k141_1877700                                     16293 0 -     26561 C
e Mico_humeralifer.k141_1180625                               8342 0 -     12984 C
e Mico_argentatus.k141_582562                                 7558 0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148081 4 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7498628 11 +  40650429 I
e Manis_pentadactyla.KN006162.1                             218460 4 +    317179 I
e Manis_javanica.JSZB01003497.1                             671169 4 -    737560 I
e Mandrillus_sphinx.Contig270                               354499 19 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        319667 19 +  24302211 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                220890 4 -    270270 I
e Macaca_tonkeana.k141_1880923                               33324 0 +     33478 C
e Macaca_thibetana.k99_41370                                 19589 0 +     21031 C
e Macaca_silenus.Contig273                                  268377 0 +    668171 C
e Macaca_siberu.k141_2185972                                 42411 0 +     59329 C
e Macaca_radiata.k141_3557992                                22623 0 +     24253 C
e Macaca_nigra.k141_2818840                                  45968 0 -     62418 C
e Macaca_nemestrina.KQ007038.1                              396804 0 +  25927173 C
e Macaca_mulatta.NC_041758.1                                412581 0 - 187317192 C
e Macaca_maura.k141_1103459                                  43380 0 +     51645 C
e Macaca_leonina.k141_321385                                 33642 0 -     50087 C
e Macaca_fuscata.k119_546792                                 22452 0 +     30527 C
e Macaca_fascicularis.k141_1397292                           19615 15 -     24934 I
e Macaca_cyclopis.k119_263443                                22512 19 +     30207 I
e Macaca_assamensis.Contig5                                 370245 0 -  60120075 C
e Macaca_arctoides.k141_1757516                              42615 0 -     61512 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330279 19 -   1826925 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6629 7 +     16388 I
e Lepilemur_ruficaudatus.k141_330196                          6635 7 +     24756 I
e Lepilemur_dorsalis.k141_387009                              6625 7 +     31569 I
e Lepilemur_ankaranensis.k141_567626                          6628 7 +     29618 I
e Leontopithecus_rosalia.k141_349454                          9194 0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     7813 0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        1180 0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           1549 0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        1598 0 -     13097 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59465 4 -     65777 I
e Lagothrix_lagothricha.k141_246028                          40918 0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236848 3 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Indri_indri.k141_4600452                                    1336 7 -      1527 I
e Ictidomys_tridecemlineatus.JH393364.1                     384429 11 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66538 6 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_23202               47141 4 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1547825 4 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28061 6 -    327341 I
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16686 3 +     18121 I
e Felis_nigripes.FelNig_flattened_line_31944                 25058 4 -     30238 I
e Felis_catus_fca126.CM031415.1                          185113710 4 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Erythrocebus_patas.Contig38                               260163 0 +  21539334 C
e Equus_przewalskii.KK951119.1                              409789 4 -    498745 I
e Equus_caballus.CM000403.2                               21373003 4 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3039069 4 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12575988 4 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           10154 3 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          28190 3 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3924 4 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  136872 4 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662087 4 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290246 0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    642497 3 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1552 6 +     87169 I
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 39957 3 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           375 4 -      8242 I
e Condylura_cristata.JH655891.1                           35804944 3 +  53390261 I
e Colobus_polykomos.k141_1559707                              6309 0 -      6605 C
e Colobus_guereza.LG01                                      376297 0 - 200372422 C
e Colobus_angolensis.KN981557.1                             406420 0 -   2368649 C
e Chlorocebus_sabaeus.CM001947.1                            301965 0 - 135778131 C
e Chlorocebus_pygerythrus.k141_3063162                        7185 0 -     44032 C
e Chlorocebus_aethiops.ctg25                                340640 0 +  18827391 C
e Chiropotes_sagulatus.k141_1113111                           5770 0 +     34062 C
e Chiropotes_israelita.k141_313004                           40198 0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           1513 0 +      5346 C
e Cheracebus_torquatus.k141_890198                           17127 0 +     39636 C
e Cheracebus_regulus.k141_471822                             17343 0 +    216457 C
e Cheracebus_lugens.k141_1179667                             17079 0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             6666 0 -     32913 C
e Cheirogaleus_medius.k141_759766                             2802 7 -     15404 I
e Cheirogaleus_major.k141_666340                             28272 7 -     33796 I
e Cercopithecus_roloway.k141_3012935                         19743 0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           22818 0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         1299 0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       25146 0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        29326 0 -     45857 C
e Cercopithecus_mona.ctg39                                  267865 0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  362157 0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                            9558 0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          24849 0 -     34525 C
e Cercopithecus_diana.k141_132293                             9127 0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           4937 0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        24992 0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          41882 19 -    148725 I
e Cercocebus_lunulatus.k141_2779015                          41899 19 -     44860 I
e Cercocebus_chrysogaster.k141_1522556                       42066 19 +     47900 I
e Cercocebus_atys.KQ010504.1                                138326 19 -   4669795 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16628 4 +     27315 I
e Cephalopachus_bancanus.k141_72622                           1184 3 -      1636 I
e Cebus_unicolor.k141_1654760                                64754 0 -     89041 C
e Cebus_olivaceus.k141_1404781                                5659 0 -     34880 C
e Cebus_albifrons.Contig27                                  368770 0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               40567 0 +     53515 C
e Cebuella_niveiventris.k141_592277                           2681 0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20044 3 -     39886 I
e Carlito_syrichta.NW_007259797.1                           268012 3 +    496798 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17395 0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165451102 0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           16147 0 +     17162 C
e Callimico_goeldii.k141_1609886                              7457 0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         18291 0 +    119600 C
e Cacajao_hosomi.k141_81245                                  18378 0 +     95584 C
e Cacajao_calvus.k141_89051                                  40852 0 -     91139 C
e Cacajao_ayresi.k141_96119                                   5558 0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3839 7 -     19611 I
e Avahi_laniger.k141_2756659                                  3838 7 +     11645 I
e Ateles_paniscus.k141_866194                                20662 0 -     33135 C
e Ateles_marginatus.k141_970259                              46603 0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              31232 0 +     44353 C
e Ateles_chamek.k141_615173                                   3679 0 -     28759 C
e Ateles_belzebuth.k141_1572163                               8542 0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               272375 0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      13677 11 -     32367 I
e Aotus_vociferans.k141_944972                                6929 0 +      8415 C
e Aotus_trivirgatus.k141_192090                              21793 0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                670151 0 +   5030052 C
e Aotus_griseimembra.k141_982342                             42138 0 +     43593 C
e Aotus_azarae.k141_118258                                   48391 0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174335 4 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30576 0 +     42133 C
e Alouatta_puruensis.k141_251022                              6437 0 +     30854 C
e Alouatta_palliata.k141_638677                              44312 0 +     70886 C
e Alouatta_nigerrima.k141_376068                             38614 0 +     45454 C
e Alouatta_macconnelli.k141_361275                           21631 0 -     24835 C
e Alouatta_juara.k141_1687208                                39985 0 -     64179 C
e Alouatta_discolor.k141_2561099                             41547 0 +     55831 C
e Alouatta_caraya.k141_1109140                               42097 0 -     78289 C
e Alouatta_belzebul.k141_1011583                             69868 0 -     84148 C
e Allochrocebus_lhoesti.k141_441277                          41075 0 +     44087 C
e Allenopithecus_nigroviridis.k141_3755588                   45154 0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    15690 3 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810263 4 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1929 63 +     36723 tccttcaccaccatagaattagatggcttctgcagatacagctaagtcttct-c-ct-t---c----------acca-cc
s Acinonyx_jubatus.LLWD01001279.1                           810267 12 +   1699592 ---------------------------------------------------t-c-tt-t---c----------gtta-cc
i Acinonyx_jubatus.LLWD01001279.1                        I 4 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412786 14 +  29979442 -------------------------------------------------TGT-C-TT-T---T----------GTCA-TA
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 4 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15693 14 -     61208 -------------------------------------------------TCT-C-CT-T---T----------GGGA-CC
i Allactaga_bullata.AllBul_scaffold_20030                I 3 I 1
s Allenopithecus_nigroviridis.k141_3755588                   45154 20 +     53615 -------------------------------------------cagtcttct-c-ct-t---t----------ccca-ct
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41075 20 +     44087 -------------------------------------------CAGTCTTTT-C-CT-T---T----------CCCA-CC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Alouatta_belzebul.k141_1011583                             69868 14 -     84148 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42097 14 -     78289 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41547 14 +     55831 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39985 14 -     64179 -------------------------------------------------TCT-T-CT-T---A----------AGTA-CC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21631 14 -     24835 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38614 14 +     45454 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44312 14 +     70886 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6437 14 +     30854 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30576 14 +     42133 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174339 14 -    412891 -------------------------------------------------tct-t-ct-c---t----------gtta-ct
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 C 0
s Aotus_azarae.k141_118258                                   48391 14 -     65372 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42138 14 +     43593 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670151 14 +   5030052 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21793 14 -     23494 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6929 14 +      8415 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13688  6 -     32367 -------------------------------------------------------------------------gtca-cc
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 11 C 0
s Arctocebus_calabarensis.k141_1364444                       17302 14 -     45910 -------------------------------------------------TCT-C-CT-T---G----------GGTA-CC
i Arctocebus_calabarensis.k141_1364444                   I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2624 14 -     15198 -------------------------------------------------tct-t-ct-c---t----------gcta-ct
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 4 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272375 14 +  21539123 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8542 14 +     48076 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3679 14 -     28759 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31232 14 +     44353 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46603 14 -     71267 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20662 14 -     33135 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3845 10 +     11645 -------------------------------------------------------ct-t---t----------ggta-cc
i Avahi_laniger.k141_2756659                             I 7 C 0
s Avahi_peyrierasi.k141_1823318                               3846 10 -     19611 -------------------------------------------------------ct-t---t----------ggta-cc
i Avahi_peyrierasi.k141_1823318                          I 7 C 0
s Cacajao_ayresi.k141_96119                                   5558 14 +     28062 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40852 14 -     91139 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18378 14 +     95584 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18291 14 +    119600 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7786 14 +     18648 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7457 12 -     13885 -------------------------------------------------TGT-T-CT-T---G----------AGCA---
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16147 14 +     17162 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CA
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451102 14 + 189096842 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17395 14 -     18408 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CA
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503056 14 +  60362399 -------------------------------------------------tgt-c-tt-c---t----------gtta-cc
i CanFam4.chr16                                          I 4 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6692 14 -     23171 -------------------------------------------------tgt-c-tt-c---t----------gtta-cc
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 4 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220035 14 +   9314153 -------------------------------------------------TGT-C-TT-C---T----------GTTA-CC
i Canis_lupus_dingo.QKWQ01000480.1                       I 4 C 0
s Canis_lupus_familiaris.chr16                            41613170 14 +  59632846 -------------------------------------------------tgt-c-tt-c---t----------gtta-cc
i Canis_lupus_familiaris.chr16                           I 4 C 0
s Canis_lupus_orion.HG994398.1                            45104751 14 -  63665305 -------------------------------------------------tgt-c-tt-c---t----------gtta-cc
i Canis_lupus_orion.HG994398.1                           I 4 C 0
s Carlito_syrichta.NW_007259797.1                           268015 14 +    496798 -------------------------------------------------TCT-T-CT-T---T----------GATA-CC
i Carlito_syrichta.NW_007259797.1                        I 3 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2695 14 +      5315 -------------------------------------------------cct-t-ct-c---t----------gtta-ct
i Carollia_perspicillata.CarPer_scaffold_170178          I 4 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20047 14 -     39886 -------------------------------------------------tct-c-at-c---t----------ggtg-gc
i Castor_canadensis.CasCan_scaffold_39952                I 3 C 0
s Cavia_aperea.AVPZ01000300.1                              4993622  1 +  23392119 -------------------------------------------------------------------------------T
i Cavia_aperea.AVPZ01000300.1                            I 18 C 0
s Cavia_porcellus.DS562891.1                               4997064  1 +  23407841 -------------------------------------------------------------------------------c
i Cavia_porcellus.DS562891.1                             I 18 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60165  1 -     66877 -------------------------------------------------------------------------------C
i Cavia_tschudii.CavTsc_scaffold_23560                   I 18 C 0
s Cebuella_niveiventris.k141_592277                           2681 14 -     12580 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40567 14 +     53515 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368770 14 -  26074798 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5659 14 -     34880 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64754 14 -     89041 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1187 14 -      1636 -------------------------------------------------TCT-T-CT-T---T----------GATA-CC
i Cephalopachus_bancanus.k141_72622                      I 3 C 0
s Ceratotherium_simum.JH767749.1                          15489799 14 -  27778364 -------------------------------------------------act-c-ct-c---t----------gtta-cc
i Ceratotherium_simum.JH767749.1                         I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16632 14 +     27315 -------------------------------------------------act-c-ct-c---t----------gtta-cc
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 4 C 0
s Cercopithecus_cephus.k141_4183004                           4937 20 +     20796 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9127 20 -     17524 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24849 20 -     34525 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9558 20 -     25376 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CTCA-CC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362157 20 -  39242232 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267865 20 +  21565898 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29326 20 -     45857 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25146 20 -     32606 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1299 20 +      8499 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22818 20 +     70610 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19743 20 +     36323 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10447 14 -     19938 -------------------------------------------------tct-t-ct-t---t----------gttg-cc
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 4 C 0
s Cheirogaleus_major.k141_666340                             28279 10 -     33796 -------------------------------------------------------CT-T---T----------GGTA-GC
i Cheirogaleus_major.k141_666340                         I 7 C 0
s Cheirogaleus_medius.k141_759766                             2809 10 -     15404 -------------------------------------------------------ct-t---t----------ggta-gc
i Cheirogaleus_medius.k141_759766                        I 7 C 0
s Cheracebus_lucifer.k141_2312002                             6666 14 -     32913 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17079 14 -     40346 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17343 14 +    216457 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17127 14 +     39636 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1513 14 +      5346 -------------------------------------------------TCT-T-CT-T---A----------CACA-CC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40198 14 -    112038 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5770 14 +     34062 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340640 20 +  18827391 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7185 20 -     44032 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301965 20 - 135778131 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804947  4 +  53390261 ----------------------------------------------------------------------------ATTC
i Condylura_cristata.JH655891.1                          I 3 C 0
s Colobus_angolensis.KN981557.1                             406420 13 -   2368649 -------------------------------------------CAGTCTTCT-C-CT-T---------------------
i Colobus_angolensis.KN981557.1                          C 0 I 6
s Colobus_guereza.LG01                                      376297 13 - 200372422 -------------------------------------------Cagtcttct-c-ct-t---------------------
i Colobus_guereza.LG01                                   C 0 I 6
s Colobus_polykomos.k141_1559707                              6309 13 -      6605 -------------------------------------------CAGTCTTCT-C-CT-T---------------------
i Colobus_polykomos.k141_1559707                         C 0 I 6
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           379 14 -      8242 -------------------------------------------------tta-t-ct-c---t----------gcta-ct
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 4 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 39960 12 -     83289 -------------------------------------------------C---C-TT-T---T----------GATA-AC
i Cricetomys_gambianus.CriGam_scaffold_14425             I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1558 12 +     87169 ---------------------------------------------------T-C-TT-C---T----------GTTA-TC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 6 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642500 14 -   1526836 -------------------------------------------------TCT-C-CT-C---T----------GATA-TA
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 3 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2592  1 +     50838 -------------------------------------------------------------------------------C
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 16 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1244  1 +     36344 -------------------------------------------------------------------------------T
i Cuniculus_paca.CunPac_flattened_line_7025              I 16 C 0
s Dasypus_novemcinctus.JH564415.1                          2107775 24 -   2246927 -------------------------------------------------tct-c-ct-c---ttgccacagaaatag-ac
i Dasypus_novemcinctus.JH564415.1                        I 4 C 0
s Desmodus_rotundus.KZ672289.1                            11862368 14 -  20541912 -------------------------------------------------tct-t-ct-c---t----------gtta-ct
i Desmodus_rotundus.KZ672289.1                           I 4 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662091 14 -   1390856 -------------------------------------------------act-c-ct-c---t----------gtta-cc
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 4 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136876 14 -    198055 -------------------------------------------------act-c-ct-c---t----------gtta-cc
i Diceros_bicornis.DicBicMic_scaffold_5955               I 4 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    95976  1 -    115145 -------------------------------------------------------------------------------C
i Dinomys_branickii.DinBra_scaffold_10381                I 16 C 0
s Dipodomys_ordii.KN672350.1                              18948162 13 -  37912305 --------------------------------------------------CT-T-CT-C---T----------GATA-CG
i Dipodomys_ordii.KN672350.1                             I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3109 13 -     10735 --------------------------------------------------TT-T-CT-C---T----------GATA-CG
i Dipodomys_stephensi.DipSte_scaffold_89095              I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7572  1 +     14636 -------------------------------------------------------------------------------C
i Dolichotis_patagonum.DolPat_scaffold_80628             I 27 C 0
s Echinops_telfairi.JH980293.1                            62851300 14 - 111700974 -------------------------------------------------GGT-C-ct-c---t----------tttg-cc
i Echinops_telfairi.JH980293.1                           I 4 C 0
s Eidolon_helvum.AWHC01266696.1                               3928 14 +     19438 -------------------------------------------------tct-t-ct-c---t----------gtta-ct
i Eidolon_helvum.AWHC01266696.1                          I 4 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28193 12 +    110024 -------------------------------------------------T---C-TT-T---C----------ATTG-AA
i Ellobius_lutescens.LOEQ01008920.1                      I 3 C 0
s Ellobius_talpinus.LOJH01026522.1                           10157 12 +     18970 -------------------------------------------------t---c-tt-t---c----------atta-aa
i Ellobius_talpinus.LOJH01026522.1                       I 3 C 0
s Enhydra_lutris.KZ291758.1                               24913588 14 +  41312741 -------------------------------------------------tgt-c-tt-c---t----------gtta-cc
i Enhydra_lutris.KZ291758.1                              I 4 C 0
s Eptesicus_fuscus.JH977646.1                             12575992  3 +  14770903 -------------------------------------------------tct----------------------------
i Eptesicus_fuscus.JH977646.1                            I 4 C 0
s Equus_asinus.JREZ01000139.1                              3039073 14 -   4378816 -------------------------------------------------GCT-C-TT-c---t----------gtta-cc
i Equus_asinus.JREZ01000139.1                            I 4 C 0
s Equus_caballus.CM000403.2                               21373007 14 +  39960074 -------------------------------------------------GCT-C-TT-c---t----------gtta-cc
i Equus_caballus.CM000403.2                              I 4 C 0
s Equus_przewalskii.KK951119.1                              409793 14 -    498745 -------------------------------------------------GCT-C-TT-c---t----------gtta-cc
i Equus_przewalskii.KK951119.1                           I 4 C 0
s Erythrocebus_patas.Contig38                               260163 20 +  21539334 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243932 12 - 206538554 ---------------------------------------------------C-C-TT-C---C----------GTTA-CC
i Felis_catus.CM001381.2                                 I 4 C 0
s Felis_catus_fca126.CM031415.1                          185113714 12 - 205367284 ---------------------------------------------------C-C-TT-C---C----------GTTA-CC
i Felis_catus_fca126.CM031415.1                          I 4 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25062 12 -     30238 ---------------------------------------------------C-C-TT-c---c----------gtta-cc
i Felis_nigripes.FelNig_flattened_line_31944             I 4 C 0
s Galago_moholi.ctg3793                                     121342 14 -    137831 -------------------------------------------------TCT-C-TT-T---G----------GGTA-CC
i Galago_moholi.ctg3793                                  I 3 C 0
s Galago_senegalensis.k141_991736                             4883 14 +     22493 -------------------------------------------------TCT-C-TT-T---G----------GGTA-CC
i Galago_senegalensis.k141_991736                        I 3 C 0
s Galagoides_demidoff.k141_561628                            16938 14 -     32986 -------------------------------------------------TCT-C-TT-T---G----------GGTA-CC
i Galagoides_demidoff.k141_561628                        I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16689 14 +     18121 -------------------------------------------------ttt-c-ct-c---t----------ggta-cc
i Galeopterus_variegatus.GalVar_scaffold_74466           I 3 C 0
s Gorilla_beringei.k141_3358147                               2291 63 -      8343 tccttcactactgcagaattaggaggcttctgcagatacggctaagtcttct-c-ct-t---c----------acca-cc
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251781 63 - 186649187 TCCTTCACCACCATAGAATTAGATGGCTTCTGCAGATACGGCTAAGTCTTCT-C-TT-T---C----------ACCA-CC
i Gorilla_gorilla.LT578341.1                             I 47 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28067 12 -    327341 ---------------------------------------------------T-C-TT-C---T----------GTTA-TC
i Helogale_parvula.HelPar_flattened_line_2585            I 6 C 0
s Heterocephalus_glaber.JH602082.1                         1924672  1 -  22651954 -------------------------------------------------------------------------------c
i Heterocephalus_glaber.JH602082.1                       I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547829 14 -   1711038 -------------------------------------------------tat-t-ct-c---t----------gtta-ct
i Hipposideros_armiger.JXIK01000431.1                    I 4 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47145 14 +     49977 -------------------------------------------------tat-t-ct-c---t----------gtta-ct
i Hipposideros_galeritus.HipGal_scaffold_23202           I 4 C 0
s Hoolock_leuconedys.ctg274                                    140048 63 -    630532 TCCTTCACCACTATAGGATTAGATTGCTTCTGCAAATATGGCTAAGTCTTGT-C-AT-T---C----------ACCA-CC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66544 12 +     83186 ---------------------------------------------------T-C-TT-C---T----------GTTA-TC
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 6 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68914  1 +    143317 -------------------------------------------------------------------------------C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 17 C 0
s Hylobates_agilis.k141_1155965                               3083 63 +     12352 tccttcaccactataggattacattgcttctgcaaatatggctaagtcttat-c-at-t---c----------acca-cg
i Hylobates_agilis.k141_1155965                          I 204 C 0
s Hylobates_klossii.k141_738755                              10266 63 +     55766 tccttcaccactataggattacattgcttctgcaaatatggctaagtcttat-c-at-t---c----------acca-cg
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2049385 63 + 191637585 ttcttcaccaccataggattaggtggcttctgcagatgcggctaagtcttct-c-ct-t---c----------acca-cc
i Hylobates_pileatus_b.LG02                                     C 0 I 477
s Hylobates_pileatus_a.tarseq_633                            7798740 63 +  11177569 TCCTTCACTACCATAGGATTAAATGGCTTTTGCAGATGCGGCTAAGTCTTCT-C-CT-T---C----------ACCA-CT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384440  6 +   7955117 -------------------------------------------------------------------------GGCA-CC
i Ictidomys_tridecemlineatus.JH393364.1                  I 11 C 0
s Indri_indri.k141_4600452                                    1343 10 -      1527 -------------------------------------------------------CT-T---T----------GGTA-CC
i Indri_indri.k141_4600452                               I 7 C 0
s Jaculus_jaculus.JH725527.1                               1236851 14 +   9596543 -------------------------------------------------TCT-C-CT-T---T----------GTGA-CC
i Jaculus_jaculus.JH725527.1                             I 3 I 1
s Lagothrix_lagothricha.k141_246028                          40918 14 +    110728 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59469  3 -     65777 -------------------------------------------------tct----------------------------
i Lasiurus_borealis.LasBor_scaffold_16567                I 4 C 0
s Leontocebus_fuscicollis.k141_2994775                        1598 14 -     13097 -------------------------------------------------TCT-T-CT-T---A----------CGCA-CC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1549 14 +      5940 -------------------------------------------------TCT-T-CT-T---A----------CGCA-CC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1180 14 -      5717 -------------------------------------------------TCT-T-CT-T---A----------CGCA-CC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7813 14 -     11567 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9194 14 -     12945 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6635 10 +     29618 -------------------------------------------------------CT-A---T----------GGTA-GC
i Lepilemur_ankaranensis.k141_567626                     I 7 C 0
s Lepilemur_dorsalis.k141_387009                              6632 10 +     31569 -------------------------------------------------------CT-A---T----------GGTA-GC
i Lepilemur_dorsalis.k141_387009                         I 7 C 0
s Lepilemur_ruficaudatus.k141_330196                          6642 10 +     24756 -------------------------------------------------------ct-a---t----------ggta-gc
i Lepilemur_ruficaudatus.k141_330196                     I 7 C 0
s Lepilemur_septentrionalis.k141_360456                       6636 10 +     16388 -------------------------------------------------------CT-G---T----------GGTA-GC
i Lepilemur_septentrionalis.k141_360456                  I 7 C 0
s Leptonychotes_weddellii.KB714746.1                        810938 14 -   3914936 -------------------------------------------------tgt-c-tt-c---t----------ctta-cc
i Leptonychotes_weddellii.KB714746.1                     I 4 C 0
s Loris_lydekkerianus.k141_2031736                            7335 15 +     19643 -------------------------------------------------TCTTC-CT-T---G----------GGTA-CC
i Loris_lydekkerianus.k141_2031736                       I 3 C 0
s Loris_tardigradus.ctg83                                  5040995 15 -   6120653 -------------------------------------------------TCTTC-CT-T---G----------GGTA-CC
i Loris_tardigradus.ctg83                                I 3 C 0
s Lycaon_pictus.CM007581.1                                41612325 14 +  59628241 -------------------------------------------------tgt-c-tt-c---t----------gtta-cc
i Lycaon_pictus.CM007581.1                               I 4 C 0
s Macaca_assamensis.Contig5                                 370245 20 -  60120075 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_fuscata.k119_546792                                 22452 20 +     30527 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33642 20 -     50087 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43380 20 +     51645 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Macaca_maura.k141_1103459                              C 0 I 33
s Macaca_mulatta.NC_041758.1                                412581 20 - 187317192 -------------------------------------------cagtcttct-c-ct-t---t----------cccg-cc
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396804 20 +  25927173 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45968 20 -     62418 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22623 20 +     24253 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42411 20 +     59329 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268377 20 +    668171 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_tonkeana.k141_1880923                               33324 20 +     33478 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220894 14 -    270270 -------------------------------------------------tct-t-ct-c---t----------gtta-ct
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 4 C 0
s Manis_javanica.JSZB01003497.1                             671173 14 -    737560 -------------------------------------------------ttt-c-tt-c---t----------gtta-ac
i Manis_javanica.JSZB01003497.1                          I 4 C 0
s Manis_pentadactyla.KN006162.1                             218464 14 +    317179 -------------------------------------------------ttt-c-tt-c---t----------gtta-cc
i Manis_pentadactyla.KN006162.1                          I 4 C 0
s Marmota_marmota.CZRN01000018.1                           7498639  6 +  40650429 -------------------------------------------------------------------------GGCA-cc
i Marmota_marmota.CZRN01000018.1                         I 11 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148085 14 +    207569 -------------------------------------------------CCG-T-AT-c---t----------gtta-ct
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23461 14 -     74585 -------------------------------------------------tgt-c-tt-c---t----------gtta-cc
i Mellivora_capensis.MelCap_flattened_line_19308         I 4 C 0
s Mico_argentatus.k141_582562                                 7558 14 +     17804 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8342 14 -     12984 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16293 14 -     26561 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982247 10 +  93316391 -------------------------------------------------------CT-T---T----------GGTA-CC
i Microcebus_murinus.CM007674.1                          I 7 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41619 14 +    145209 -------------------------------------------------AAT-C-TT-C---T----------GTTT-CC
i Microgale_talazaci.MicTal_scaffold_6613                I 4 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182311 14 +    200668 -------------------------------------------------cct-t-ct-c---t----------gtta-ct
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 4 C 0
s Miopithecus_ogouensis.k141_1534655                         19682 20 -     27822 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5948 14 +     27589 -------------------------------------------------tgt-c-tt-c---t----------ctta-cc
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 4 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176488 14 +    366855 -------------------------------------------------TCT-T-CT-T---T----------GCTA-CT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15821 12 -     63510 ---------------------------------------------------T-C-TT-C---T----------GTTA-TC
i Mungos_mungo.MunMun_flattened_line_18455               I 6 C 0
s Murina_feae.MurFea_scaffold_17764                          36340  3 +     47283 -------------------------------------------------tct----------------------------
i Murina_feae.MurFea_scaffold_17764                      I 4 C 0
s Mustela_putorius.JH418006.1                             14352401 14 +  14710649 -------------------------------------------------tgt-c-tt-c---t----------gtta-cc
i Mustela_putorius.JH418006.1                            I 4 C 0
s Myotis_brandtii.KE162005.1                               9790356  3 +  10118263 -------------------------------------------------tct----------------------------
i Myotis_brandtii.KE162005.1                             I 4 C 0
s Myotis_davidii.KB100139.1                                4384755  3 +   6019432 -------------------------------------------------tct----------------------------
i Myotis_davidii.KB100139.1                              I 4 C 0
s Myotis_lucifugus.GL429869.1                               380577  3 +   4330536 -------------------------------------------------tct----------------------------
i Myotis_lucifugus.GL429869.1                            I 4 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117217 14 +    130748 -------------------------------------------------tct-c-ct-t---t----------gtca-cc
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 4 C 0
s Nasalis_larvatus.k141_1350636                              26263 20 +     34575 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466335 14 -  31847680 -------------------------------------------------tgt-c-tt-c---t----------ctta-cc
i Neomonachus_schauinslandi.NINY01007730.1               I 4 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125132 13 -    149072 --------------------------------------------------CT-T-CT-C---T----------GTTC-CT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           50972 63 -    132029 TCCTTCACCACTATAGGATTAGATTGCTTCTGCAAATATGGCTAAGTCTTAT-C-AT-T---C----------ACCA-CC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7067 63 -     16345 TCCTTCACCACTATAGGATTAGATTGCTTCTGCAAATATGGCTAAGTCTTAT-C-AT-T---C----------ACCA-CC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             12952 63 +     22201 TCCTTCACCACTATAGGATTAGATTGCTTCTGCAAATATGGCTAAGTCTTAT-C-AT-T---C----------ACCA-CC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411236 63 -  22158432 TCCTTCACCACTATAGGATTAGATTGCTTCTGCAAATATGGCTAAGTCTTAT-C-AT-T---C----------ACCA-CC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23350 63 -     54323 TCCTTCACCACTATAGGATTAGATTGCTTCTGCAAATATGGCTAAGTCTTAT-C-AT-T---C----------ACCA-CC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195927 14 +   9404916 -------------------------------------------------tgt-c-tt-c---t----------gtta-cc
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 4 C 0
s Nycticebus_bengalensis.LG01                             93632626 15 + 196305487 -------------------------------------------------TTTTC-CT-T---G----------GGTA-CC
i Nycticebus_bengalensis.LG01                            I 3 C 0
s Nycticebus_coucang.k141_8166032                             2015 15 +      2758 -------------------------------------------------TTTTC-CT-T---G----------GGTA-CC
i Nycticebus_coucang.k141_8166032                        I 3 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560880 15 - 199412804 -------------------------------------------------TTTTC-CT-T---G----------GGTA-CC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 3 C 0
s Octodon_degus.JH651603.1                                11044946  1 -  11899542 -------------------------------------------------------------------------------C
i Octodon_degus.JH651603.1                               I 16 C 0
s Odobenus_rosmarus.KB229312.1                             1449123 14 +   2017862 -------------------------------------------------tgt-c-tt-c---t----------gtta-cc
i Odobenus_rosmarus.KB229312.1                           I 4 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    89909 12 -    140218 -------------------------------------------------G---C-AT-T---C----------ATTA-AA
i Ondatra_zibethicus.OndZib_scaffold_7387                I 3 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104743 12 +    107918 -------------------------------------------------T---C-TT-T---C----------TATA-AC
i Onychomys_torridus.OnyTor_scaffold_2487                I 3 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11008 14 -     14239 -------------------------------------------------tct-c-tt-g---t----------gttg-cc
i Orycteropus_afer.OryAfe_flattened_line_171931          I 4 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36966 14 +    559221 -------------------------------------------------tgc-c-tt-c---t----------gtta-cc
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 C 0
s Otolemur_crassicaudatus.k141_649260                        36467 14 -     51505 -------------------------------------------------TCT-C-TT-T---G----------GGTA-CC
i Otolemur_crassicaudatus.k141_649260                    I 3 C 0
s Otolemur_garnettii.GL873799.1                             349481 14 +   1103335 -------------------------------------------------TCT-C-TT-T---G----------GGTA-CC
i Otolemur_garnettii.GL873799.1                          I 3 C 0
s Pan_troglodytes.KZ622849.1                                 30250 63 -    110857 tccttcaccactgcagaattaggaggcttctgcagatatggctaagtcttct-c-ct-t---c----------acca-cc
i Pan_troglodytes.KZ622849.1                             I 7 I 87
s Panthera_onca.PanOnc_flattened_line_3271                   21883 12 -    230217 ---------------------------------------------------t-c-tt-c---c----------gtta-cc
i Panthera_onca.PanOnc_flattened_line_3271               I 4 C 0
s Panthera_pardus.KV860321.1                              18459209 12 -  18783137 ---------------------------------------------------t-c-tt-c---c----------gtta-cc
i Panthera_pardus.KV860321.1                             I 4 C 0
s Panthera_tigris.KE722367.1                               3969929 12 +   8748460 ---------------------------------------------------t-c-tt-c---c----------gtta-cc
i Panthera_tigris.KE722367.1                             I 4 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12543 12 +     78924 ---------------------------------------------------T-C-TT-c---t----------gtta-cc
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 6 C 0
s Perodicticus_ibeanus.k141_1921260                          22721 14 +     31479 -------------------------------------------------TCT-C-CT-T---A----------GGTA-CC
i Perodicticus_ibeanus.k141_1921260                      I 3 C 0
s Perodicticus_potto.k141_1854441                            15091 14 -     24908 -------------------------------------------------TCT-C-CC-T---A----------GGTA-CC
i Perodicticus_potto.k141_1854441                        I 3 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37359 16 +     38305 --------------------------------------------------CC-T-CT-CCTGT----------GGTA-CT
i Perognathus_longimembris.PerPac_flattened_line_28053   I 1 C 0
s Peromyscus_maniculatus.KI615324.1                         244389 12 +  18517816 -------------------------------------------------T---C-TT-T---C----------CATA-AC
i Peromyscus_maniculatus.KI615324.1                      I 3 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29626  1 -     56120 -------------------------------------------------------------------------------T
i Petromus_typicus.PetTyp_scaffold_17301                 I 16 C 0
s Piliocolobus_badius.k141_2495623                            6414 14 +      7560 -------------------------------------------CAGTCTTCT-C-CTTT---------------------
i Piliocolobus_badius.k141_2495623                       C 0 I 6
s Piliocolobus_gordonorum.k141_905727                        62122 14 -     63152 -------------------------------------------CAGTCTTCT-C-CTTT---------------------
i Piliocolobus_gordonorum.k141_905727                    C 0 I 6
s Piliocolobus_kirkii.k141_579682                            44721 14 +     45295 -------------------------------------------CAGTCTTCT-C-CTTT---------------------
i Piliocolobus_kirkii.k141_579682                        C 0 I 6
s Piliocolobus_tephrosceles.PDMG02034973.1                    2399 14 +      5735 -------------------------------------------CAGTCTTCT-C-CTTT---------------------
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 I 6
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              515  3 +     22231 -------------------------------------------------tct----------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 4 C 0
s Pithecia_albicans.k141_1239476                             62548 14 +    207309 -------------------------------------------------TCT-T-CT-T---C----------AGCA-CC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_hirsuta.k141_640380                               29383 14 +     58159 -------------------------------------------------TCT-T-CT-T---C----------AGCA-CC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29659 14 +     63561 -------------------------------------------------TCT-T-CT-T---C----------AGCA-CC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29422 14 +     51148 -------------------------------------------------TCT-T-CT-T---C----------AGCA-CC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29406 14 +     51125 -------------------------------------------------TCT-T-CT-T---C----------AGCA-CC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5837 14 +     39866 -------------------------------------------------GCT-T-CT-T---A----------AGCA-CC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           922 14 -      9282 -------------------------------------------------GCT-T-CT-T---A----------AGCA-CC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40326 14 -     87950 -------------------------------------------------GCT-T-CT-T---A----------AGCA-CC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40719 14 -     88961 -------------------------------------------------GCT-T-CT-T---A----------AGCA-CC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5418 14 -     39403 -------------------------------------------------GCT-T-CT-T---A----------AGCA-CC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40372 14 +     87928 -------------------------------------------------GCT-T-CT-T---A----------AGCA-CC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5415 14 -     60166 -------------------------------------------------GCT-T-CT-T---A----------AGCA-CC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12351 14 -     67232 -------------------------------------------------GCT-T-CT-T---A----------AGCA-CC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40267 14 -     90634 -------------------------------------------------GCT-T-CT-T---A----------AGCA-CC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41735 14 +     89403 -------------------------------------------------GCT-T-CT-T---A----------AGCA-CC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174797 63 - 189387572 TCCTTCACCACCATagaattaggtggcttctacagatacggctaagtCTTCT-C-CT-T---C----------ACCA-CC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189795 63 -   9816681 TCCTTCACCTTCATAGGATTAGGTGGCTTCTGCAGATATGGCTAAGTCTTCT-C-CT-T---C----------ACCA-CC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24896 20 +     69807 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42091 20 -     80239 -------------------------------------------Cagtcttct-c-ct-t---t----------ccca-cc
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563724 10 -   2598838 -------------------------------------------------------CT-T---T----------GGTA-CC
i Propithecus_coquerelli.NW_012148875.1                  I 3 C 0
s Propithecus_coronatus.k141_209299                           1360 10 -      7103 -------------------------------------------------------CT-T---T----------GGta-cc
i Propithecus_coronatus.k141_209299                      I 3 C 0
s Propithecus_diadema.k141_153680                             1957 10 -     11706 -------------------------------------------------------CT-T---T----------GGta-cc
i Propithecus_diadema.k141_153680                        I 3 C 0
s Propithecus_edwardsi.k141_635656                            5693 10 -     30655 -------------------------------------------------------CT-T---T----------GGta-cc
i Propithecus_edwardsi.k141_635656                       I 3 C 0
s Propithecus_perrieri.k141_1496898                          32018 10 +     46564 -------------------------------------------------------CT-T---T----------GGta-cc
i Propithecus_perrieri.k141_1496898                      I 3 C 0
s Propithecus_tattersalli.k141_1127767                       92289 10 -     98465 -------------------------------------------------------CT-T---T----------GGta-cc
i Propithecus_tattersalli.k141_1127767                   I 3 C 0
s Propithecus_verreauxi.k141_1047036                          5926 10 +     35169 -------------------------------------------------------CT-T---T----------GGta-cc
i Propithecus_verreauxi.k141_1047036                     I 3 C 0
s Pteronotus_parnellii.KE847780.1                            49554 14 -     66298 -------------------------------------------------tct-t-ct-c---t----------gtta-ct
i Pteronotus_parnellii.KE847780.1                        I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2179 14 -     18639 -------------------------------------------------tgt-c-tt-c---t----------gtta-cc
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 4 C 0
s Pteropus_alecto.KB030862.1                               5838523 13 -  28871421 ---------------------------------------------------T-TTTT-G---T----------GTTA-CT
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Pteropus_vampyrus.KN525825.1                             3535090 12 -   4952924 ---------------------------------------------------T-T-TT-c---t----------gtta-ct
i Pteropus_vampyrus.KN525825.1                           I 3 C 0
s Puma_concolor.QAVW01001104.1                            18096529 12 +  38429054 ---------------------------------------------------t-c-tt-c---c----------gtta-cc
i Puma_concolor.QAVW01001104.1                           I 4 C 0
s Pygathrix_cinerea.k141_1153803                             24287 20 +     91421 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150780 20 -   7812017 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5157 20 +     72585 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911177 14 +   3329780 -------------------------------------------------tat-a-ct-c---t----------gtta-ct
i Rhinolophus_sinicus.LVEH01000134.1                     I 4 C 0
s Rhinopithecus_bieti.k119_221883                            26117 17 +     27361 -------------------------------------------Cagtcttct-c-ct-t---c----------ccc----
i Rhinopithecus_bieti.k119_221883                        C 0 I 2
s Rhinopithecus_roxellana.NC_044550.1                    104119465 17 + 195417433 -------------------------------------------CGGTCTTCT-C-CT-T---C----------CCC----
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 2
s Rhinopithecus_strykeri.ctg102                             233725 17 -   7961872 -------------------------------------------Cagtcttct-c-ct-t---c----------ccc----
i Rhinopithecus_strykeri.ctg102                          C 0 I 2
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72507 12 -    116970 ---------------------------------------------------t-t-ct-c---t----------gtta-ct
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1511 14 +     27962 -------------------------------------------------TCT-T-CT-T---A----------CACA-CC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1519 14 +      6077 -------------------------------------------------TCT-T-CT-T---A----------CGCA-CC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1538 14 +      5971 -------------------------------------------------TCT-T-CT-T---A----------CGCA-CC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1592 14 +      5932 -------------------------------------------------TCT-T-CT-T---A----------CGCA-CC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1737 14 -      2099 -------------------------------------------------TCT-T-CT-T---A----------CGCA-CC
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388859 14 - 209938924 -------------------------------------------------TCG-T-CT-T---A----------CGCA-CC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1540 14 +      5979 -------------------------------------------------TCT-T-CT-T---A----------CGCA-CC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1906 14 -      4301 -------------------------------------------------TCT-T-CT-T---A----------CGCA-CC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     235994 14 +   5703754 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5584 14 +     21866 -------------------------------------------------TCT-T-CT-T---A----------AGCA-CC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113714 15 +    313613 -------------------------------------------------tct-c-aa-a---c----------gctcccc
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 4 C 0
s Semnopithecus_entellus.k141_158471                         22604 20 +     27374 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26123 20 +     58920 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12619 20 -     45317 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20277 20 -     42441 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22957 20 -     29113 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26026 20 -     48123 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    45956 12 +     77746 -------------------------------------------------T---C-TT-T---T----------AATA-AC
i Sigmodon_hispidus.SigHis_scaffold_20193                I 3 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856029 15 -   1910179 -------------------------------------------------ACT-C-TT-C---T----------GTTAAcc
i Solenodon_paradoxus.SolPar_flattened_line_126          I 4 C 0
s Spermophilus_dauricus.KZ294078.1                         1866009  6 +   3870691 -------------------------------------------------------------------------GGCA-CC
i Spermophilus_dauricus.KZ294078.1                       I 11 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4176 14 -     97271 -------------------------------------------------tct-c-tt-c---t----------gtta-cc
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 4 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122232 12 +    196729 ---------------------------------------------------T-C-TT-C---T----------GTTA-TC
i Suricata_suricatta.SurSur_flattened_line_6629          I 6 C 0
s Symphalangus_syndactylus.tarseq_199                       388208 63 +   1523678 TCCTTCACCACTATAGGATTAGATTGCTTCTGCAAATATGGCTAAGTCTTAT-C-AT-T---C----------ACCA-CC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11356  3 +     22964 -------------------------------------------------Tct----------------------------
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 4 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 335 14 +      5583 -------------------------------------------------GCT-C-CT-T---T----------GTCA-cc
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 4 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189052 14 +    199430 -------------------------------------------------act-c-ct-c---t----------gtca-cc
i Tapirus_indicus.TapInd_scaffold_7432                   I 4 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103008 14 -    539355 -------------------------------------------------act-c-ct-c---t----------gtca-cc
i Tapirus_terrestris.TapTer_scaffold_755                 I 4 C 0
s Tarsius_lariang.k141_1780720                                4707 14 +      6850 -------------------------------------------------TCT-T-CT-T---T----------GATA-CC
i Tarsius_lariang.k141_1780720                           I 3 C 0
s Tarsius_wallacei.k141_226975                                4746 14 +     20590 -------------------------------------------------TCT-T-CT-T---T----------GATA-CC
i Tarsius_wallacei.k141_226975                           I 3 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              21956  1 -     33621 -------------------------------------------------------------------------------C
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 16 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17455 14 -     31044 -------------------------------------------------tct-c-ct-t---t----------gttg-cc
i Tolypeutes_matacus.TolMat_scaffold_31955               I 4 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477372 14 -    610378 -------------------------------------------------tct-t-ct-c---t----------gtta-ct
i Tonatia_saurophila.TonSau_scaffold_294                 I 4 C 0
s Trachypithecus_auratus.k141_1189070                        18168 20 +     26378 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30852 20 -     78344 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17489 20 +     25722 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25714 20 -     62838 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25831 20 +     46913 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6639 20 -     28527 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27653 20 -     64340 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25690 20 -     63452 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7133 20 +     22490 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          561 20 -      6147 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7555 20 -     13050 -------------------------------------------Cagtcttct-c-ct-t---t----------ccca-cc
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252794 20 -   6242583 -------------------------------------------Cagtcttct-c-ct-t---t----------ccca-cc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58525 20 +     59866 -------------------------------------------CAGTCTTCT-C-CT-T---T----------CCCA-CC
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831295 14 -   4065304 -------------------------------------------------tct-t-ct-c---t----------ggta-cc
i Tupaia_chinensis.KB320699.1                            I 3 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5811 14 -     70247 -------------------------------------------------tct-t-ct-c---t----------ggta-cc
i Tupaia_tana.TupTan_flattened_line_394                  I 3 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104940 15 -    105689 -------------------------------------------------tct-c-cc-c---t----------actaacc
i Uropsilus_gracilis.UroGra_scaffold_7153                I 4 C 0
s Ursus_maritimus.KK499267.1                                179296 14 +   5085361 -------------------------------------------------TGT-C-TT-T---T----------GTCA-Tc
i Ursus_maritimus.KK499267.1                             I 4 C 0
s Varecia_rubra.k141_787544                                  22788 10 -     30710 -------------------------------------------------------CT-T---T----------GGTA-GC
i Varecia_rubra.k141_787544                              I 7 C 0
s Varecia_variegata.k141_289850                              21695 10 -    147434 -------------------------------------------------------ct-t---t----------ggta-gc
i Varecia_variegata.k141_289850                          I 7 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102690 14 -    112863 -------------------------------------------------tgt-c-tt-c---t----------gtta-cc
i Vulpes_lagopus.VulLag_flattened_line_12041             I 4 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171766  6 -    224448 -------------------------------------------------------------------------GGCA-ct
i Xerus_inauris.XerIna_scaffold_2302                     I 10 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26343 14 -     86975 -------------------------------------------------tgt-c-tt-c---t----------gtta-cc
i Zalophus_californianus.ZalCal_flattened_line_17732     I 4 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1009 14 +      2695 -------------------------------------------------TGT-C-CC-T---T----------GGGA-TC
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 4 I 11
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Allochrocebus_solatus.k141_3554717                         15365 53 +     32033 I
e Allochrocebus_preussi.k141_1993939                         13689 52 -     21945 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Theropithecus_gelada.CM009954.1                           350493 19 - 186847797 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pithecia_pithecia.tarseq_165                              554412  0 -   4542175 C
e Pithecia_chrysocephala.k141_785207                          3665  0 -     25401 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Papio_ursinus.k141_2278143                                 19572 19 -     23640 I
e Papio_papio.k141_799093                                    12762 19 +     16796 I
e Papio_kindae.k141_2214839                                  19626 19 -     27687 I
e Papio_hamadryas.Contig39                                  288010 19 -  20919399 I
e Papio_cynocephalus.k141_1507553                             6971 19 +     21308 I
e Papio_anubis.CM001495.2                                   240507 19 - 183742232 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50064  3 -     62432 I
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Mandrillus_sphinx.Contig270                               354499 19 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        319667 19 +  24302211 I
e Macaca_thibetana.k99_41370                                 19589  0 +     21031 C
e Macaca_fascicularis.k141_1397292                           19615 15 -     24934 I
e Macaca_cyclopis.k119_263443                                22512 19 +     30207 I
e Macaca_arctoides.k141_1757516                              42615  0 -     61512 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330279 19 -   1826925 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290246  0 +  12879189 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cercopithecus_ascanius.k141_3120866                        24992  0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          41882 19 -    148725 I
e Cercocebus_lunulatus.k141_2779015                          41899 19 -     44860 I
e Cercocebus_chrysogaster.k141_1522556                       42066 19 +     47900 I
e Cercocebus_atys.KQ010504.1                                138326 19 -   4669795 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       1992 11 +     36723 gtag---aat-----ta--gg
s Acinonyx_jubatus.LLWD01001279.1                           810279 11 +   1699592 acag---aaa-----ca--gg
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412800 11 +  29979442 atag---aag-----ca--ga
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15708  4 -     61208 ---------------CA--TA
i Allactaga_bullata.AllBul_scaffold_20030                I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45174 11 +     53615 acag---aat-----ta--aa
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41095 11 +     44087 ACAG---AAT-----TA--GA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13741  5 -     21945 ---------T-----TA--GA
i Allochrocebus_preussi.k141_1993939                     I 52 C 0
s Allochrocebus_solatus.k141_3554717                         15418  4 +     32033 ---------------TA--GA
i Allochrocebus_solatus.k141_3554717                     I 53 C 0
s Alouatta_belzebul.k141_1011583                             69882 11 -     84148 ATAG---AAT-----TA--GG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42111 11 -     78289 ATAG---AAT-----TA--GG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41561 11 +     55831 ATAG---AAT-----TA--GG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39999 11 -     64179 ATAG---AAT-----TA--GG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21645 11 -     24835 ATAG---AAT-----TA--GG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38628 11 +     45454 ATAG---AAT-----TA--GG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44326 11 +     70886 ATAG---AAT-----TA--GG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6451 11 +     30854 ATAG---AAT-----TA--GG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30590 11 +     42133 GTAG---AAT-----TA--GG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174353  9 -    412891 gtag---aa-------a--ga
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Aotus_azarae.k141_118258                                   48405 11 -     65372 ACAG---AAT-----TA--GG
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42152 11 +     43593 ACAG---AAT-----TA--GG
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670165 11 +   5030052 ACAG---AAT-----TA--GG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21807 11 -     23494 ACAG---AAT-----TA--GG
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6943 11 +      8415 ACAG---AAT-----TA--GG
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13694  7 -     32367 acag---aaa-----------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 4
s Arctocebus_calabarensis.k141_1364444                       17316 11 -     45910 AGAG---AAA-----GA--AG
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2638  9 -     15198 gtag---aa-------a--ga
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 2
s Ateles_geoffroyi_b.tarseq_1536                               272389 11 +  21539123 ATAG---AAT-----TA--GG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8556 11 +     48076 ATAG---AAT-----TA--GG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3693 11 -     28759 ATAG---AAT-----TA--GG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31246 11 +     44353 ATAG---AAT-----TA--GG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46617 11 -     71267 ATAG---AAT-----TA--GG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20676 11 -     33135 ATAG---AAT-----TA--GG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3855 11 +     11645 acag---aaa-----ta--gg
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3856 11 -     19611 acag---aaa-----ta--gg
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5572 11 +     28062 GTAG---AAT-----TA--GG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40866 11 -     91139 GTAG---AAT-----TA--GG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18392 11 +     95584 GTAG---AAT-----TA--GG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18305 11 +    119600 GTAG---AAT-----TA--GG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7800 11 +     18648 GTAG---AAT-----TA--GG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7469  5 -     13885 ---------T-----TA--GG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16161 11 +     17162 GTAG---AAT-----TA--GG
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451116 11 + 189096842 GTAG---AAT-----TA--GG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17409 11 -     18408 GTAG---AAT-----TA--GG
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503070 11 +  60362399 atag---aaa-----ca--ga
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6706 11 -     23171 atag---aaa-----ca--ga
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220049 11 +   9314153 ATAG---AAA-----CA--GA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613184 11 +  59632846 atag---aaa-----ca--ga
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104765 11 -  63665305 atag---aaa-----ca--ga
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268029 11 +    496798 ACAG---CAA-----CA--GA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2709  9 +      5315 gtag---aa-------a--ga
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 2
s Castor_canadensis.CasCan_scaffold_39952                    20061 11 -     39886 acag---aaa-----ca--ga
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993623 11 +  23392119 ACAG---AAT-----CA--AG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997065 11 +  23407841 acag---aat-----ca--ag
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60166 11 -     66877 ACAG---AAT-----CA--AG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2695 11 -     12580 GTAG---AAT-----TA--GG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40581 11 +     53515 GTAG---AAT-----TA--GG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368784 11 -  26074798 ACAG---AAT-----TA--GG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5673 11 -     34880 ACAG---AAT-----TA--GG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64768 11 -     89041 ACAG---AAT-----TA--GG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1201 11 -      1636 ACAG---CAA-----CA--GA
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489813 11 -  27778364 atag---aaa-----ca--ga
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16646 11 +     27315 atag---aaa-----ca--ga
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24992  7 -     40656 -------AAT-----TA--GA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4957 11 +     20796 ACAG---AAT-----TA--GA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9147 11 -     17524 ACAG---AAT-----TA--GA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24869 11 -     34525 ACAG---AAT-----TA--GA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9578 11 -     25376 GCAG---AAT-----TA--GA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362177 11 -  39242232 ACAG---AAT-----TA--GA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267885 11 +  21565898 ACAG---AAT-----TA--GA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29346 11 -     45857 ACGG---AAT-----TA--GA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25166 11 -     32606 ACAG---AAT-----TA--GA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1319 11 +      8499 ACAG---AAT-----TA--GA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22838 11 +     70610 ACAC---AAT-----TA--CA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19763 11 +     36323 ACAG---AAT-----TA--GA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10461 11 -     19938 accg---aaa-----ca--ga
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28289 11 -     33796 ACAG---AAA-----TA--GG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2819 11 -     15404 acag---aaa-----ta--gg
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6680 11 -     32913 ATAG---AGT-----TA--GG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17093 11 -     40346 ATAG---AGT-----TA--GG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17357 11 +    216457 ATAG---AGT-----TA--GG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17141 11 +     39636 ATAG---AGT-----TA--GG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1527 11 +      5346 CTAG---AAT-----TA--GG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40212 11 -    112038 GTAG---AAT-----TA--GG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5784 11 +     34062 GTAG---AAT-----TA--GG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340660 11 +  18827391 ACAG---AAT-----TA--GA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7205 11 -     44032 ACAG---AAT-----TA--GA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301985 11 - 135778131 ACAG---AAT-----TA--GA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406439 11 -   2368649 ACAG---AAT-----TA--GA
i Colobus_angolensis.KN981557.1                          I 6 C 0
s Colobus_guereza.LG01                                      376316 11 - 200372422 acag---aat-----ta--ga
i Colobus_guereza.LG01                                   I 6 C 0
s Colobus_polykomos.k141_1559707                              6328 11 -      6605 ACAG---AAT-----TA--GA
i Colobus_polykomos.k141_1559707                         I 6 C 0
s Condylura_cristata.JH655891.1                           35804951 10 +  53390261 -TCg---aaa-----ta--ga
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           393 11 -      8242 acag---aaa-----ta--ga
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 39972 11 -     83289 AAAT---AAA-----CA--GA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1570 11 +     87169 CTag---aaa-----ca--ga
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642514 12 -   1526836 ACAA--AAAT-----CA--GT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2593 11 +     50838 ACAG---AAT-----TT--GG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1245 11 +     36344 ACAG---GAT-----CA--GG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2107799 11 -   2246927 acag---aaa-----ta--gg
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290246  3 +  12879189 ----------------g--gc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862382  9 -  20541912 gtag---aa-------a--gt
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662105 11 -   1390856 atag---aaa-----ca--ga
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136890 11 -    198055 atag---aaa-----ca--ga
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    95977 11 -    115145 ACAG---AAT-----CA--GG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948175 11 -  37912305 ATAG---AAA-----CA--GA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3122 11 -     10735 ATAG---AAA-----CA--GA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7573 10 +     14636 AGAG---AAT-----C---GG
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851314 14 - 111700974 acagacgaaa-----ca--ga
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               3942 11 +     19438 gtag---aaa-----tt--ga
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28205  7 +    110024 A-------AA-----GA--GA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10169  7 +     18970 a-------aa-----ga--GA
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913602 11 +  41312741 atag---aaa-----aa--ga
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039087 11 -   4378816 atgg---aaa-----ca--ga
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373021 11 +  39960074 atgg---aaa-----ca--ga
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409807 11 -    498745 atgg---aaa-----ca--ga
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260183 11 +  21539334 ACAG---AAT-----TA--GA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243944 11 - 206538554 ACAG---AAA-----CA--GG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185113726 11 - 205367284 ACAG---AAA-----CA--GG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25074 11 -     30238 acag---aaa-----ca--gg
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     121356 11 -    137831 AGAG---AAA-----GA--AG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4897 11 +     22493 AGAG---AAA-----GA--AG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16952 11 -     32986 AGAG---AAA-----GA--AG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16703 11 +     18121 acag---aaa-----ca--ga
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               2354 11 -      8343 atag---aat-----tg--ga
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251844 11 - 186649187 ATAG---AAT-----TA--GG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28079  6 -    327341 CTAG---AA------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Heterocephalus_glaber.JH602082.1                         1924673 11 -  22651954 acag---aat-----ta--gg
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547843 11 -   1711038 atag---aaa-----ga--ga
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47159 11 +     49977 atag---aaa-----ga--ga
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140111 11 -    630532 ATAG---AAT-----TA--GA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66556 11 +     83186 CTAG---AAC-----CG--GA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68915 11 +    143317 AAAG---AAT-----CA--GG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3146 11 +     12352 atag---aat-----ta--ga
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10329 11 +     55766 atag---aat-----ta--ga
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2049925 11 + 191637585 atag---aat-----ta--ga
i Hylobates_pileatus_b.LG02                                     I 477 T 477
s Hylobates_pileatus_a.tarseq_633                            7798803 11 +  11177569 ATAG---GAT-----TA--GA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384446  7 +   7955117 ACAG---AAA-----------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                    1353 11 -      1527 ACAG---AAA-----CA--GG
i Indri_indri.k141_4600452                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1236866  4 +   9596543 ---------------CA--TA
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Lagothrix_lagothricha.k141_246028                          40932 11 +    110728 GTAG---AAT-----TA--GG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1612 11 -     13097 CTAG---AAT-----TA--GG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1563 11 +      5940 CTAG---AAT-----TA--GG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1194 11 -      5717 ATAG---AAT-----TA--GG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7827 11 -     11567 GTAG---AAT-----TA--GG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9208 11 -     12945 GTAG---AAT-----TA--GG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6645 11 +     29618 ACAG---AAA-----TA--GG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6642 11 +     31569 ACAG---AAA-----TA--GG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6652 11 +     24756 acag---aaa-----ta--gg
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6646 11 +     16388 ACAG---AAA-----TA--GG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810952 11 -   3914936 atag---aaa-----ca--ga
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7350 11 +     19643 AGAG---AAA-----GA--AA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041010 11 -   6120653 AGAG---AAA-----GA--AA
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612339 11 +  59628241 atag---aaa-----ta--ga
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_assamensis.Contig5                                 370265 11 -  60120075 ACAG---AAT-----TA--GA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_fascicularis.k141_1397292                           19630  4 -     24934 ---------------TA--GA
i Macaca_fascicularis.k141_1397292                       I 15 C 0
s Macaca_fuscata.k119_546792                                 22472 11 +     30527 ACAG---AAT-----TA--GA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33662 11 -     50087 GCAG---AAT-----TA--GA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43433 11 +     51645 ACAG---AAT-----TA--GA
i Macaca_maura.k141_1103459                              I 33 C 0
s Macaca_mulatta.NC_041758.1                                412601 11 - 187317192 acag---aat-----ta--ga
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396824 11 +  25927173 GCAG---AAT-----TA--GA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45988 11 -     62418 ACAG---AAT-----TA--GA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22643 11 +     24253 ACAG---AAT-----TA--GA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42431 11 +     59329 GCAG---AAT-----TA--GA
i Macaca_siberu.k141_2185972                             C 0 I 33
s Macaca_silenus.Contig273                                  268397 11 +    668171 GCAG---AAT-----TA--GA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_tonkeana.k141_1880923                               33344 11 +     33478 GCAG---AAT-----TA--GA
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220908 11 -    270270 gtag---aaa-----ca--gg
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Manis_javanica.JSZB01003497.1                             671187 11 -    737560 atag---aaa-----ta--ga
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218478 11 +    317179 atag---aaa-----ta--ga
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498645  7 +  40650429 acag---aaa-----------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148099  9 +    207569 acag---ag-------a--ga
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23475 11 -     74585 atag---aaa-----ga--ga
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mico_argentatus.k141_582562                                 7572 11 +     17804 GTAG---AAT-----TA--GG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8356 11 -     12984 GTAG---AAT-----TA--GG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16307 11 -     26561 GTAG---AAT-----TA--GG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982257 11 +  93316391 ACGG---AAA-----TA--GG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41633 11 +    145209 ACAG---AAA-----CA--GA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182325  7 +    200668 gcag---aa-------a----
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 2
s Miopithecus_ogouensis.k141_1534655                         19702 11 -     27822 ACAG---AAT-----TA--GA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5962 11 +     27589 atag---aaa-----ca--ga
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176502 11 +    366855 GTGG---aa-------ggaga
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15833  6 -     63510 CTAG---AA------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 1
s Mustela_putorius.JH418006.1                             14352415 11 +  14710649 atag---aag-----ga--ga
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117231 11 +    130748 acag---aaa-----ca--ga
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26283 11 +     34575 ACAG---AAT-----TA--GA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466349 11 -  31847680 atag---aaa-----ca--ga
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125145  4 -    149072 Gcag-----------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 1
s Nomascus_annamensis.k141_1771965                           51035 11 -    132029 ATAG---AAT-----TA--GA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7130 11 -     16345 ATAG---AAT-----TA--GA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13015 11 +     22201 ATAG---AAT-----TA--GA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411299 11 -  22158432 ATAG---AAT-----TA--GA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23413 11 -     54323 ATAG---AAT-----TA--GA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195941 11 +   9404916 atag---aaa-----ca--ga
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93632641 11 + 196305487 AGAG---AAA-----GA--AG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             2030 11 +      2758 AGAG---AAA-----GA--AG
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560895 11 - 199412804 AGAG---AAA-----GA--AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11044947 11 -  11899542 ACAG---AAT-----TT--GG
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449137 11 +   2017862 atag---aaa-----ca--ga
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    89921 12 -    140218 A-------AAAGAGACA--GA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104755 11 +    107918 AAAG---AAA-----CA--GA
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11022 11 -     14239 acag---aaa-----ca--ga
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36980 11 +    559221 atag---aaa-----ca--ga
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        36481 11 -     51505 AGAG---AAA-----GA--AG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             349495 11 +   1103335 AGAG---AAA-----GA--AG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1469731 11 - 189151597 atag---aat-----ta--ga
i Pan_troglodytes.CM009242.2                             I 561 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21895 11 -    230217 acag---aaa-----ca--gg
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459221 11 -  18783137 acag---aaa-----ca--gg
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3969941 11 +   8748460 agag---aaa-----ca--gg
i Panthera_tigris.KE722367.1                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12555 11 +     78924 atag---aaa-----ca--ga
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22735 11 +     31479 AGAG---AAA-----GA--AG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            15105 11 -     24908 AGAG---AAA-----GA--AG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37375 11 +     38305 ATAG---AAA-----CA--CA
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244401 11 +  18517816 AAAG---AAA-----CA--GA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29627 11 -     56120 ACAC---AGT-----CA--GG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6434 11 +      7560 ACAG---AAT-----TA--GA
i Piliocolobus_badius.k141_2495623                       I 6 C 0
s Piliocolobus_gordonorum.k141_905727                        62142 11 -     63152 ACAG---AAT-----TA--GA
i Piliocolobus_gordonorum.k141_905727                    I 6 C 0
s Piliocolobus_kirkii.k141_579682                            44741 11 +     45295 ACAG---AAT-----TA--GA
i Piliocolobus_kirkii.k141_579682                        I 6 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2419 11 +      5735 ACAG---AAT-----TA--GA
i Piliocolobus_tephrosceles.PDMG02034973.1               I 6 C 0
s Pithecia_albicans.k141_1239476                             62562 11 +    207309 ACAG---AAT-----TA--GG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3665  4 -     25401 ---------------TA--GG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29397 11 +     58159 ACAG---AAT-----TA--GG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29673 11 +     63561 ACAG---AAT-----TA--GG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29436 11 +     51148 ACAG---AAT-----TA--GG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554412  4 -   4542175 ---------------TA--GG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29420 11 +     51125 ACAG---AAT-----TA--GG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5851 11 +     39866 ATAG---AGT-----TA--GG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           936 11 -      9282 ATAG---AGT-----TA--GG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40340 11 -     87950 ATAG---AGT-----TA--GG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40733 11 -     88961 ATAG---AGT-----TA--GG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5432 11 -     39403 ATAG---AGT-----TA--GG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40386 11 +     87928 ATAG---AGT-----TA--GG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5429 11 -     60166 ATAG---AGT-----TA--GG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12365 11 -     67232 ATAG---AGT-----TA--GG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40281 11 -     90634 ATAG---AGT-----TA--GG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41749 11 +     89403 ATAG---AGT-----TA--GG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174860 11 - 189387572 ATAG---AAT-----TA--GG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189858 11 -   9816681 ATAG---AAT-----TA--GG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24916 11 +     69807 ACAG---AAT-----TA--GA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42111 11 -     80239 acag---aat-----ta--ga
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563734 11 -   2598838 ACAG---AAA-----TA--GG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1370 11 -      7103 acag---aaa-----ta--gg
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1967 11 -     11706 acag---aaa-----ta--tg
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5703 11 -     30655 aaag---aaa-----ta--gg
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32028 11 +     46564 acag---aaa-----ta--tg
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92299 11 -     98465 acag---aaa-----ta--gg
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5936 11 +     35169 acag---aaa-----ta--gg
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49568 11 -     66298 gtag---aa-------agaga
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2193 11 -     18639 atag---aaa-----ga--ga
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838536 11 -  28871421 GTag---aaa-----ta--ga
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535102 11 -   4952924 gtag---aaa-----ta--ga
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096541 11 +  38429054 acag---aaa-----ca--gg
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24307 11 +     91421 ACAG---AAT-----TA--GA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150800 11 -   7812017 ACAG---AAT-----TA--GA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5177 11 +     72585 ACAG---AAT-----TA--GA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911191 11 +   3329780 gtag---aaa-----ga--ga
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26136 11 +     27361 acag---aat-----ta--ga
i Rhinopithecus_bieti.k119_221883                        I 2 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119484 11 + 195417433 ACAG---AAT-----TA--GA
i Rhinopithecus_roxellana.NC_044550.1                    I 2 C 0
s Rhinopithecus_strykeri.ctg102                             233744 11 -   7961872 acag---aat-----ta--ga
i Rhinopithecus_strykeri.ctg102                          I 2 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72519 11 -    116970 gtag---aaa-----ta--ga
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1525 11 +     27962 CTAG---AAT-----TA--GG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1533 11 +      6077 CTAG---AAT-----TA--GG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1552 11 +      5971 CTAG---AAT-----TA--GG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1606 11 +      5932 CTAG---AAT-----TA--GG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1751 11 -      2099 CTAG---AAT-----TA--GG
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388873 11 - 209938924 CTAG---AAT-----TA--GG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1554 11 +      5979 CTAG---AAT-----TA--GG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1920 11 -      4301 CTAG---AAT-----TA--GG
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236008 11 +   5703754 ACAG---AAT-----TA--GG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5598 11 +     21866 ACAG---AAT-----TA--GG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113729 10 +    313613 -tag---aaa-----ta--ga
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22624 11 +     27374 ACAG---AAT-----TA--GA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26143 11 +     58920 ACAG---AAT-----TA--GA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12639 11 -     45317 ACAG---AAT-----TA--GA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20297 11 -     42441 ACAG---AAT-----TA--GA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22977 11 -     29113 ACAG---AAT-----TA--GA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26046 11 -     48123 ACAG---AAT-----TA--GA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    45968  9 +     77746 AAAG---AAA-----C----A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856044 11 -   1910179 acag---caa-----ta--ga
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866015  7 +   3870691 ACAG---AAA-----------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4190 11 -     97271 atag---aaa-----ca--ga
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122244  6 +    196729 CTAG---AA------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Symphalangus_syndactylus.tarseq_199                       388271 11 +   1523678 ATAG---AAT-----TA--GA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 349 11 +      5583 acag---aaa-----ca--ga
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189066 11 +    199430 atag---aaa-----ca--ga
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103022 11 -    539355 atag---aaa-----ca--ga
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4721 11 +      6850 ACAG---CAA-----CA--GA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4760 11 +     20590 ACAG---CAA-----CA--GA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              21957 11 -     33621 AAAG---AAG-----CA--GG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17469 11 -     31044 accg---aaa-----ca--ga
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477386  9 -    610378 gcag---aa-------a--gg
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_1189070                        18188 11 +     26378 ACAG---AAT-----TA--GA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30872 11 -     78344 ACAG---AAT-----TA--GA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17509 11 +     25722 ACAG---AAT-----TA--GA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25734 11 -     62838 ACAG---AAT-----TA--GA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25851 11 +     46913 ACAG---AAT-----TA--GA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6659 11 -     28527 ACAG---AAT-----TA--GA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27673 11 -     64340 ACAG---AAT-----TA--GA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25710 11 -     63452 ACAG---AAT-----TA--GA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7153 11 +     22490 ACAG---AAT-----TA--GA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          581 11 -      6147 ACAG---AAT-----TA--GA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7575 11 -     13050 acag---aat-----ta--ga
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252814 11 -   6242583 acag---aat-----ta--ga
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58545 11 +     59866 ACAG---AAT-----TA--GA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831309 11 -   4065304 acag---tca-----ca--ga
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5825 11 -     70247 acag---cca-----ca--ga
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104955 10 -    105689 -taa---aaa-----ta--ga
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179310 11 +   5085361 atag---aag-----ca--ga
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22798 11 -     30710 ACAG---AAA-----TA--GG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21705 11 -    147434 acag---aaa-----ta--gg
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102704 11 -    112863 atag---aaa-----ca--ga
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171772  7 -    224448 acag---aaa-----------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26357 11 -     86975 atag---aaa-----ca--ga
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_211135                      1034 11 +      3117 ATAG---AAA-----CA--GA
i Zapus_hudsonius.ZapHud_scaffold_211135                 I 20 T 11
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Theropithecus_gelada.CM009954.1                           350493 19 - 186847797 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11359  0 +     22964 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              518  0 +     22231 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Papio_ursinus.k141_2278143                                 19572 19 -     23640 I
e Papio_papio.k141_799093                                    12762 19 +     16796 I
e Papio_kindae.k141_2214839                                  19626 19 -     27687 I
e Papio_hamadryas.Contig39                                  288010 19 -  20919399 I
e Papio_cynocephalus.k141_1507553                             6971 19 +     21308 I
e Papio_anubis.CM001495.2                                   240507 19 - 183742232 I
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380580  0 +   4330536 C
e Myotis_davidii.KB100139.1                                4384758  0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9790359  0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36343  0 +     47283 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50064  3 -     62432 I
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Mandrillus_sphinx.Contig270                               354499 19 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        319667 19 +  24302211 I
e Macaca_thibetana.k99_41370                                 19589  0 +     21031 C
e Macaca_cyclopis.k119_263443                                22512 19 +     30207 I
e Macaca_arctoides.k141_1757516                              42615  0 -     61512 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330279 19 -   1826925 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59472  0 -     65777 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12575995  0 +  14770903 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cercocebus_torquatus.k141_2159127                          41882 19 -    148725 I
e Cercocebus_lunulatus.k141_2779015                          41899 19 -     44860 I
e Cercocebus_chrysogaster.k141_1522556                       42066 19 +     47900 I
e Cercocebus_atys.KQ010504.1                                138326 19 -   4669795 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2003 6 +     36723 a---ggctt
s Acinonyx_jubatus.LLWD01001279.1                           810290 6 +   1699592 t---ggcta
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412811 6 +  29979442 c---tgctg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15712 6 -     61208 C---TACTT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 2
s Allenopithecus_nigroviridis.k141_3755588                   45185 6 +     53615 t---ggctt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41106 6 +     44087 T---GGCTT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13746 6 -     21945 T---GGCTT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15422 6 +     32033 T---GGCTT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69893 6 -     84148 T---GGTTT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42122 6 -     78289 T---GGTTT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41572 6 +     55831 T---GGTTT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40010 6 -     64179 T---GGTTT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21656 6 -     24835 T---GGTTT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38639 6 +     45454 T---GGTTT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44337 6 +     70886 T---GGTTT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6462 6 +     30854 T---GGTTT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30601 6 +     42133 T---GGTTT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174364 6 -    412891 c---cagtt
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 C 0
s Aotus_azarae.k141_118258                                   48416 6 -     65372 T---GGTTT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42163 6 +     43593 T---GGTTT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670176 6 +   5030052 T---GGTTT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21818 6 -     23494 T---GGTTT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6954 6 +      8415 T---GGTTT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13705 6 -     32367 c---taatc
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 4 C 0
s Arctocebus_calabarensis.k141_1364444                       17327 6 -     45910 C---TGTTT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2649 6 -     15198 c---cagtg
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 2 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272400 6 +  21539123 T---GGTTT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8567 6 +     48076 T---GGTTT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3704 6 -     28759 T---GGTTT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31257 6 +     44353 T---GGTTT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46628 6 -     71267 T---GGTTT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20687 6 -     33135 T---GGTTT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3866 5 +     11645 ----tgctt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3867 5 -     19611 ----tgctt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5583 6 +     28062 T---GGTTT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40877 6 -     91139 T---GGTTT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18403 6 +     95584 T---GGTTT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18316 6 +    119600 T---GGTTT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7811 6 +     18648 T---GGTTT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7474 6 -     13885 T---GGTTT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16172 6 +     17162 T---GGTGT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451127 6 + 189096842 T---GGTTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17420 6 -     18408 T---GGTTT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503081 6 +  60362399 c---tgctg
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6717 6 -     23171 c---tgctg
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220060 6 +   9314153 C---TGCTG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613195 6 +  59632846 c---tgctg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104776 6 -  63665305 c---tgctg
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268040 6 +    496798 C---TGCTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2720 6 +      5315 c---cagtt
i Carollia_perspicillata.CarPer_scaffold_170178          I 2 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20072 6 -     39886 t---tgctc
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993634 6 +  23392119 C---TACTC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997076 6 +  23407841 c---tactc
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60177 6 -     66877 C---TACTC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2706 6 -     12580 T---GGTTT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40592 6 +     53515 T---GGTTT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368795 6 -  26074798 T---GGTTT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5684 6 -     34880 T---GGTTT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64779 6 -     89041 T---GGTTT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1212 6 -      1636 C---TGCTT
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489824 6 -  27778364 t---tgctt
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16657 6 +     27315 t---tgctt
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138345 6 -   4669795 T---GGCTT
i Cercocebus_atys.KQ010504.1                             I 19 C 0
s Cercocebus_chrysogaster.k141_1522556                       42085 6 +     47900 T---GGCTT
i Cercocebus_chrysogaster.k141_1522556                   I 19 C 0
s Cercocebus_lunulatus.k141_2779015                          41918 6 -     44860 T---GGCTT
i Cercocebus_lunulatus.k141_2779015                      I 19 C 0
s Cercocebus_torquatus.k141_2159127                          41901 6 -    148725 T---GGCTT
i Cercocebus_torquatus.k141_2159127                      I 19 C 0
s Cercopithecus_ascanius.k141_3120866                        24999 6 -     40656 T---GGCTT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4968 6 +     20796 T---GGCTT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9158 6 -     17524 T---GGCTT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24880 6 -     34525 T---GGCTT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9589 6 -     25376 T---GGCTT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362188 6 -  39242232 T---GGCTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267896 6 +  21565898 T---GGCTT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29357 6 -     45857 T---GGCTT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25177 6 -     32606 T---GGCTT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1330 6 +      8499 T---GGCTT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22849 6 +     70610 T---GGCTT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19774 6 +     36323 T---GGCTT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10472 6 -     19938 c---tgttt
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28300 5 -     33796 ----TGCTT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2830 5 -     15404 ----tgctt
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6691 6 -     32913 T---GGGTT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17104 6 -     40346 T---GGGTT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17368 6 +    216457 T---GGGTT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17152 6 +     39636 T---GGGTT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1538 6 +      5346 T---GGTTT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40223 6 -    112038 T---GGTTT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5795 6 +     34062 T---GGTTT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340671 6 +  18827391 T---GGCTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7216 6 -     44032 T---GGCTT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301996 6 - 135778131 T---GGCTT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406450 6 -   2368649 T---GGTTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376327 6 - 200372422 t---ggttt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              6339 6 -      6605 T---GGTTT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804961 6 +  53390261 c---tacat
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           404 6 -      8242 c---tgacc
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 39983 6 -     83289 C---AACTC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1581 6 +     87169 c---agctg
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642526 6 -   1526836 C---TATTC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2604 6 +     50838 C---TACTC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1256 6 +     36344 A---TACTC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2107810 6 -   2246927 c---tgctt
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290249 5 +  12879189 ----tgctt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662116 6 -   1390856 t---tgctt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136901 6 -    198055 t---tgctt
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    95988 6 -    115145 C---TATTC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948186 6 -  37912305 T---TACTC
i Dipodomys_ordii.KN672350.1                             C 0 I 59
s Dipodomys_stephensi.DipSte_scaffold_89095                   3133 6 -     10735 T---TACTC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 59
s Dolichotis_patagonum.DolPat_scaffold_80628                  7583 6 +     14636 T---TACTC
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851328 6 - 111700974 t---tgctt
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               3953 6 +     19438 c---tgctt
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28212 6 +    110024 T---TACTC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10176 6 +     18970 T---TACTC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913613 6 +  41312741 t---tgctg
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12575995 1 +  14770903 --------t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039098 5 -   4378816 t---ta-tt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373032 5 +  39960074 t---ta-tt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409818 5 -    498745 t---ta-tt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260194 6 +  21539334 T---GGCTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243955 6 - 206538554 T---GGCTA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185113737 6 - 205367284 T---GGCTA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25085 6 -     30238 t---ggcta
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     121367 6 -    137831 C---TGCTT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4908 6 +     22493 C---TGCTT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16963 6 -     32986 T---TGCTT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16714 6 +     18121 c---cgctt
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               2365 6 -      8343 t---ggatt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251855 6 - 186649187 T---GGCTT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28086 6 -    327341 C---AGCTA
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Heterocephalus_glaber.JH602082.1                         1924684 6 -  22651954 c---tactc
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547854 6 -   1711038 t---tgctt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47170 6 +     49977 t---tgctt
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140122 6 -    630532 T---GGCTT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66567 6 +     83186 C---AGCTG
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68926 6 +    143317 C---TACTC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3157 6 +     12352 t---ggctt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10340 6 +     55766 t---ggctt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2049459 6 + 191637585 t---ggctt
i Hylobates_pileatus_b.LG02                                     T 477 C 0
s Hylobates_pileatus_a.tarseq_633                            7798814 6 +  11177569 T---TGCTT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384453 6 +   7955117 C---TACTC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                    1364 5 -      1527 ----TGCTT
i Indri_indri.k141_4600452                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1236870 6 +   9596543 C---TACTG
i Jaculus_jaculus.JH725527.1                             C 0 I 2
s Lagothrix_lagothricha.k141_246028                          40943 6 +    110728 T---GGTTT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59472 1 -     65777 --------t
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1623 6 -     13097 T---GGTTT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1574 6 +      5940 T---GGTTT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1205 6 -      5717 T---GGTTT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7838 6 -     11567 T---GGTTT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9219 6 -     12945 T---GGTTT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6656 5 +     29618 ----TGCTT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6653 5 +     31569 ----TGCTT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6663 5 +     24756 ----tgctt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6657 5 +     16388 ----TGCTT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810963 6 -   3914936 c---tgctg
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               330298 6 -   1826925 T---GGCTT
i Lophocebus_aterrimus.ctg367                            I 19 C 0
s Loris_lydekkerianus.k141_2031736                            7361 6 +     19643 C---TTCTT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041021 6 -   6120653 C---TTCTT
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612350 6 +  59628241 c---tgctg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42615 6 -     61512 T---GGCTT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370276 6 -  60120075 T---GGCTT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22531 6 +     30207 T---GGCTT
i Macaca_cyclopis.k119_263443                            I 19 C 0
s Macaca_fascicularis.k141_1397292                           19634 6 -     24934 T---GGCTT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22483 6 +     30527 T---GGCTT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33673 6 -     50087 T---GGCTT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43444 6 +     51645 T---GGCTT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412612 6 - 187317192 t---GGCTT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396835 6 +  25927173 T---GGCTT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45999 6 -     62418 T---GGCTT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22654 6 +     24253 T---GGCTT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42475 6 +     59329 T---GGCTT
i Macaca_siberu.k141_2185972                             I 33 C 0
s Macaca_silenus.Contig273                                  268408 6 +    668171 T---GGCTT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19589 6 +     21031 T---GGCTT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_1880923                               33355 9 +     33478 TACAGTCTT
i Macaca_tonkeana.k141_1880923                           C 0 T 23
s Macroglossus_sobrinus.MacSob_scaffold_4024                220919 6 -    270270 c---tgctt
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319686 6 +  24302211 T---GGCTT
i Mandrillus_leucophaeus.scaffold280                     I 19 C 0
s Mandrillus_sphinx.Contig270                               354518 6 -    752769 T---GGCTT
i Mandrillus_sphinx.Contig270                            I 19 C 0
s Manis_javanica.JSZB01003497.1                             671198 6 -    737560 c---tgctt
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218489 6 +    317179 c---tgctt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498652 6 +  40650429 c---taccc
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148108 6 +    207569 c---tcctg
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23486 6 -     74585 t---tgctg
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mico_argentatus.k141_582562                                 7583 6 +     17804 T---GGTTT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8367 6 -     12984 T---GGTTT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16318 6 -     26561 T---GGTTT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982268 5 +  93316391 ----CGCTT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41644 6 +    145209 T---TGTTT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182334 6 +    200668 c---ctcct
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 2 C 0
s Miopithecus_ogouensis.k141_1534655                         19713 6 -     27822 T---GGCTT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5973 6 +     27589 c---tgctg
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50067 2 -     62432 -------tt
i Mirza_zaza.k141_766280                                 I 3 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176513 6 +    366855 c---cgctt
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15840 6 -     63510 C---AGCTG
i Mungos_mungo.MunMun_flattened_line_18455               I 1 C 0
s Murina_feae.MurFea_scaffold_17764                          36343 1 +     47283 --------c
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14352426 6 +  14710649 t---tgctg
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790359 1 +  10118263 --------t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4384758 1 +   6019432 --------t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380580 1 +   4330536 --------t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117242 5 +    130748 ----tgctt
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26294 6 +     34575 T---GGCTT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466360 6 -  31847680 c---tgctg
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125150 6 -    149072 c---tactt
i Noctilio_leporinus.NocLep_scaffold_7894                I 1 C 0
s Nomascus_annamensis.k141_1771965                           51046 6 -    132029 T---GGCTT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7141 6 -     16345 T---GGCTT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13026 6 +     22201 T---GGCTT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411310 6 -  22158432 T---GGCTT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23424 6 -     54323 T---GGCTT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195952 6 +   9404916 c---tgctg
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93632652 6 + 196305487 C---TGCTT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             2041 6 +      2758 C---TGCTT
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560906 6 - 199412804 C---TGCTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11044958 6 -  11899542 C---TActc
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449148 6 +   2017862 c---tgctg
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    89933 6 -    140218 T---TACTC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104766 6 +    107918 T---TACTA
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11033 6 -     14239 t---tgcct
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36991 6 +    559221 c---tgctg
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        36492 6 -     51505 C---TGCTT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             349506 6 +   1103335 C---TGCTT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1469742 6 - 189151597 t---ggctt
i Pan_troglodytes.CM009242.2                             C 0 I 22
s Panthera_onca.PanOnc_flattened_line_3271                   21906 6 -    230217 t---ggcta
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459232 6 -  18783137 t---ggcta
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3969952 6 +   8748460 t---ggcta
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240526 6 - 183742232 T---GGCTT
i Papio_anubis.CM001495.2                                I 19 C 0
s Papio_cynocephalus.k141_1507553                             6990 6 +     21308 T---GGCTT
i Papio_cynocephalus.k141_1507553                        I 19 C 0
s Papio_hamadryas.Contig39                                  288029 6 -  20919399 T---GGCTT
i Papio_hamadryas.Contig39                               I 19 C 0
s Papio_kindae.k141_2214839                                  19645 6 -     27687 T---GGCTT
i Papio_kindae.k141_2214839                              I 19 C 0
s Papio_papio.k141_799093                                    12781 6 +     16796 T---GGCTT
i Papio_papio.k141_799093                                I 19 C 0
s Papio_ursinus.k141_2278143                                 19591 6 -     23640 T---GGCTT
i Papio_ursinus.k141_2278143                             I 19 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12566 6 +     78924 c---agctg
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22746 6 +     31479 C---TGCTT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            15116 6 -     24908 C---TGCTT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37386 6 +     38305 T---TACTC
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 I 60
s Peromyscus_maniculatus.KI615324.1                         244412 5 +  18517816 T---T-CTC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29638 6 -     56120 C---TATTC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6445 6 +      7560 T---GGCTT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62153 6 -     63152 T---GGCTT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44752 6 +     45295 T---GGCTT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2430 6 +      5735 T---GGCTT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              518 1 +     22231 --------t
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62573 6 +    207309 T---GGTTT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3669 6 -     25401 T---GGTTT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29408 6 +     58159 T---GGTTT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29684 6 +     63561 T---GGTTT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29447 6 +     51148 T---GGTTT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554416 6 -   4542175 T---GGTTT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29431 6 +     51125 T---GGTTT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5862 6 +     39866 T---GGGTT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           947 6 -      9282 T---GGGTT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40351 6 -     87950 T---GGGTT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40744 6 -     88961 T---GGGTT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5443 6 -     39403 T---GGGTT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40397 6 +     87928 T---GGGTT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5440 6 -     60166 T---GGGTT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12376 6 -     67232 T---GGGTT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40292 6 -     90634 T---GGGTT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41760 6 +     89403 T---GGGTT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174871 6 - 189387572 T---GGCTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189869 6 -   9816681 T---GGCTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24927 6 +     69807 T---GGCTT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42122 6 -     80239 t---ggctt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563745 5 -   2598838 ----TGCTT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1381 5 -      7103 ----tgctt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1978 5 -     11706 ----tgctt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5714 5 -     30655 ----tgctt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32039 5 +     46564 ----tgctt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92310 5 -     98465 ----tgctt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5947 5 +     35169 ----tgctt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49579 6 -     66298 c---cactg
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2204 6 -     18639 t---tgctg
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838547 6 -  28871421 c---tgttt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535113 6 -   4952924 c---tgttt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096552 6 +  38429054 t---ggcta
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24318 6 +     91421 T---GGCTT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150811 6 -   7812017 T---GGCTT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5188 6 +     72585 T---GGCTT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911202 6 +   3329780 c---tgctt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26147 6 +     27361 t---ggctt
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119495 6 + 195417433 T---GGCTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233755 6 -   7961872 t---ggctt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72530 6 -    116970 c---tgctt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1536 6 +     27962 T---GGTTT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1544 6 +      6077 T---GGTTT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1563 6 +      5971 T---GGTTT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1617 6 +      5932 T---GGTTT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1762 6 -      2099 T---GGTTT
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388884 6 - 209938924 T---GGTTT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1565 6 +      5979 T---GGTTT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1931 6 -      4301 T---GGTTT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236019 6 +   5703754 T---GGTTT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5609 6 +     21866 T---GGTTT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113739 6 +    313613 c---tgctt
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22635 6 +     27374 T---GGCTT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26154 6 +     58920 T---GGCTT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12650 6 -     45317 T---GGCTT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20308 6 -     42441 T---GGCTT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22988 6 -     29113 T---GGCTT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26057 6 -     48123 T---GGCTT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    45977 6 +     77746 T---TCCTC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856055 6 -   1910179 c---cactt
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866022 6 +   3870691 C---TACTC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4201 6 -     97271 c---cgctg
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122251 6 +    196729 C---AGCTG
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Symphalangus_syndactylus.tarseq_199                       388282 6 +   1523678 T---GGCTT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11359 1 +     22964 --------t
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 360 5 +      5583 ----tgctt
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189077 6 +    199430 c---tgctt
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103033 6 -    539355 c---tgctt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4732 6 +      6850 C---TGCTT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4771 6 +     20590 C---TGCTT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350512 6 - 186847797 T---GGCTT
i Theropithecus_gelada.CM009954.1                        I 19 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              21968 6 -     33621 C---TACTC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17480 6 -     31044 c---tgttt
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477397 6 -    610378 c---cagtt
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 C 0
s Trachypithecus_auratus.k141_1189070                        18199 6 +     26378 T---GGCTT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30883 6 -     78344 T---GGCTT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17520 6 +     25722 T---GGCTT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25745 6 -     62838 T---GGCTT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25862 6 +     46913 T---GGCTT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6670 6 -     28527 T---GGCTT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27684 6 -     64340 T---GGCTT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25721 6 -     63452 T---GGCTT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7164 6 +     22490 T---GGCTT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          592 6 -      6147 T---GGCTT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7586 6 -     13050 t---ggctt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252825 6 -   6242583 t---ggctt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58556 6 +     59866 T---GGCTT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831320 6 -   4065304 c---cgctt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5836 6 -     70247 c---tgctt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104965 6 -    105689 c---tgctt
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179321 6 +   5085361 c---tgctg
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22809 5 -     30710 ----TGCTT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21716 5 -    147434 ----tgctt
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102715 6 -    112863 c---tgctg
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171779 7 -    224448 c--atacta
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26368 6 -     86975 c---tgctg
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1034 6 +      2695 T---GACTA
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 11 I 2
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862391 0 -  20541912 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2009 22 +     36723 c----------------------------t-gcaga-ta--------cggct-aaatcttc
s Acinonyx_jubatus.LLWD01001279.1                           810296 17 +   1699592 c----------------------------t-gcaaa-ta--------gggct-aat-----
i Acinonyx_jubatus.LLWD01001279.1                        C 0 T 37
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412817 17 +  29979442 c----------------------------t-gcaga-ta--------tggct-aat-----
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 T 37
s Allactaga_bullata.AllBul_scaffold_20030                    15720  7 -     61208 -------------------------------------------------GAAAATT-----
i Allactaga_bullata.AllBul_scaffold_20030                I 2 T 23
s Allenopithecus_nigroviridis.k141_3755588                   45191 17 +     53615 c----------------------------t-gcaaa-ta--------cagct-aag-----
i Allenopithecus_nigroviridis.k141_3755588               C 0 T 37
s Allochrocebus_lhoesti.k141_441277                          41112 17 +     44087 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Allochrocebus_lhoesti.k141_441277                      C 0 T 37
s Allochrocebus_preussi.k141_1993939                         13752 17 -     21945 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Allochrocebus_preussi.k141_1993939                     C 0 T 28
s Allochrocebus_solatus.k141_3554717                         15428 17 +     32033 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Allochrocebus_solatus.k141_3554717                     C 0 T 27
s Alouatta_belzebul.k141_1011583                             69899 17 -     84148 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Alouatta_belzebul.k141_1011583                         C 0 T 37
s Alouatta_caraya.k141_1109140                               42128 17 -     78289 C----------------------------T-GCAAA-TA--------CAGCT-CAG-----
i Alouatta_caraya.k141_1109140                           C 0 T 37
s Alouatta_discolor.k141_2561099                             41578 17 +     55831 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Alouatta_discolor.k141_2561099                         C 0 T 37
s Alouatta_juara.k141_1687208                                40016 17 -     64179 C----------------------------T-GCAAA-TA--------CAGCT-CAG-----
i Alouatta_juara.k141_1687208                            C 0 T 37
s Alouatta_macconnelli.k141_361275                           21662 17 -     24835 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Alouatta_macconnelli.k141_361275                       C 0 T 37
s Alouatta_nigerrima.k141_376068                             38645 17 +     45454 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Alouatta_nigerrima.k141_376068                         C 0 T 37
s Alouatta_palliata.k141_638677                              44343 17 +     70886 C----------------------------T-GCAAA-TA--------CGACT-CAG-----
i Alouatta_palliata.k141_638677                          C 0 T 37
s Alouatta_puruensis.k141_251022                              6468 17 +     30854 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Alouatta_puruensis.k141_251022                         C 0 T 37
s Alouatta_seniculus.k141_928287                             30607 17 +     42133 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Alouatta_seniculus.k141_928287                         C 0 T 37
s Anoura_caudifer.AnoCau_scaffold_1412                      174370 17 -    412891 c----------------------------t-gcaaa-ta--------cagct-aaa-----
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 T 37
s Aotus_azarae.k141_118258                                   48422 17 -     65372 C----------------------------T-GCAAA-TA--------TGGCT-CAG-----
i Aotus_azarae.k141_118258                               C 0 T 37
s Aotus_griseimembra.k141_982342                             42169 17 +     43593 C----------------------------T-GCAAA-TA--------TGGCT-CAG-----
i Aotus_griseimembra.k141_982342                         C 0 T 37
s Aotus_nancymaae.KZ198451.1                                670182 17 +   5030052 C----------------------------T-GCAAA-TA--------TGGCT-CAG-----
i Aotus_nancymaae.KZ198451.1                             C 0 T 37
s Aotus_trivirgatus.k141_192090                              21824 17 -     23494 C----------------------------T-GCAAA-TA--------TGGCT-CAG-----
i Aotus_trivirgatus.k141_192090                          C 0 T 37
s Aotus_vociferans.k141_944972                                6960 17 +      8415 C----------------------------T-GCAAA-TA--------TGGCT-CAG-----
i Aotus_vociferans.k141_944972                           C 0 T 37
s Aplodontia_rufa.AprRuf_scaffold_46868                      13711 21 -     32367 c----------------------------t-gcaaa-ta----aatgtgact-aat-----
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 T 41
s Arctocebus_calabarensis.k141_1364444                       17333 17 -     45910 C----------------------------T-GCAAA-TA--------TGGCT-AAG-----
i Arctocebus_calabarensis.k141_1364444                   C 0 T 37
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2655 17 -     15198 c----------------------------t-gcaat-ta--------cagat-aag-----
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 T 37
s Ateles_geoffroyi_b.tarseq_1536                               272406 17 +  21539123 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Ateles_geoffroyi_b.tarseq_1536                            C 0 T 37
s Ateles_belzebuth.k141_1572163                               8573 17 +     48076 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Ateles_belzebuth.k141_1572163                          C 0 T 37
s Ateles_chamek.k141_615173                                   3710 17 -     28759 C----------------------------T-GCAAA-TA--------TAGCT-CAG-----
i Ateles_chamek.k141_615173                              C 0 T 37
s Ateles_geoffroyi_a.k141_1283730                              31263 17 +     44353 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Ateles_geoffroyi_a.k141_1283730                          C 0 T 37
s Ateles_marginatus.k141_970259                              46634 17 -     71267 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Ateles_marginatus.k141_970259                          C 0 T 37
s Ateles_paniscus.k141_866194                                20693 17 -     33135 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Ateles_paniscus.k141_866194                            C 0 T 37
s Avahi_laniger.k141_2756659                                  3871 17 +     11645 c----------------------------t-aaaaa-ta--------tggct-aat-----
i Avahi_laniger.k141_2756659                             C 0 T 36
s Avahi_peyrierasi.k141_1823318                               3872 17 -     19611 c----------------------------t-aaaaa-ta--------tggct-aat-----
i Avahi_peyrierasi.k141_1823318                          C 0 T 36
s Cacajao_ayresi.k141_96119                                   5589 17 +     28062 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cacajao_ayresi.k141_96119                              C 0 T 37
s Cacajao_calvus.k141_89051                                  40883 17 -     91139 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cacajao_calvus.k141_89051                              C 0 T 37
s Cacajao_hosomi.k141_81245                                  18409 17 +     95584 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cacajao_hosomi.k141_81245                              C 0 T 37
s Cacajao_melanocephalus.k141_619699                         18322 17 +    119600 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cacajao_melanocephalus.k141_619699                     C 0 T 37
s Callibella_humilis.k141_1233062                             7817 17 +     18648 C----------------------------T-GCAAA-TA--------CGGCT-CGG-----
i Callibella_humilis.k141_1233062                        C 0 T 37
s Callimico_goeldii.k141_1609886                              7480 17 -     13885 C----------------------------T-GCAAA-TA--------CGGCT-CTG-----
i Callimico_goeldii.k141_1609886                         C 0 T 29
s Callithrix_geoffroyi.k119_473390                           16178 17 +     17162 C----------------------------T-GCAAA-TA--------CAGCT-CAG-----
i Callithrix_geoffroyi.k119_473390                       C 0 T 37
s Callithrix_jacchus.pat_scaffold_3                      165451133 17 + 189096842 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Callithrix_jacchus.pat_scaffold_3                      C 0 T 37
s Callithrix_kuhlii.k119_404482                              17426 17 -     18408 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Callithrix_kuhlii.k119_404482                          C 0 T 37
s CanFam4.chr16                                           42503087 17 +  60362399 c----------------------------t-gcaaa-tg--------tggct-aat-----
i CanFam4.chr16                                          C 0 T 37
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6723 17 -     23171 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 T 37
s Canis_lupus_dingo.QKWQ01000480.1                          220066 17 +   9314153 C----------------------------T-GCAAA-TG--------TGGCT-aat-----
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 T 37
s Canis_lupus_familiaris.chr16                            41613201 17 +  59632846 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Canis_lupus_familiaris.chr16                           C 0 T 37
s Canis_lupus_orion.HG994398.1                            45104782 17 -  63665305 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Canis_lupus_orion.HG994398.1                           C 0 T 37
s Carlito_syrichta.NW_007259797.1                           268046 17 +    496798 C----------------------------T-GAAAA-TA--------AGGCT-AAC-----
i Carlito_syrichta.NW_007259797.1                        C 0 T 37
s Carollia_perspicillata.CarPer_scaffold_170178               2726 17 +      5315 c----------------------------t-gcaaa-ta--------tggct-aaa-----
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 T 37
s Castor_canadensis.CasCan_scaffold_39952                    20078 16 -     39886 t----------------------------t-gcaaa-ta--------t-gct-aat-----
i Castor_canadensis.CasCan_scaffold_39952                C 0 T 36
s Cavia_aperea.AVPZ01000300.1                              4993640 17 +  23392119 C----------------------------T-ATAAA-TA--------AAGGT-AAG-----
i Cavia_aperea.AVPZ01000300.1                            C 0 T 35
s Cavia_porcellus.DS562891.1                               4997082 17 +  23407841 c----------------------------t-ataaa-ta--------aaggt-aag-----
i Cavia_porcellus.DS562891.1                             C 0 T 35
s Cavia_tschudii.CavTsc_scaffold_23560                       60183 17 -     66877 C----------------------------T-ATAAA-TA--------AAGGT-AAG-----
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 T 35
s Cebuella_niveiventris.k141_592277                           2712 17 -     12580 C----------------------------T-GCGAA-TA--------TGGCT-CAG-----
i Cebuella_niveiventris.k141_592277                      C 0 T 37
s Cebuella_pygmaea.k141_145798                               40598 17 +     53515 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cebuella_pygmaea.k141_145798                           C 0 T 37
s Cebus_albifrons.Contig27                                  368801 17 -  26074798 C----------------------------C-GCAAA-TA--------AGGCT-CAG-----
i Cebus_albifrons.Contig27                               C 0 T 37
s Cebus_olivaceus.k141_1404781                                5690 17 -     34880 C----------------------------C-GCAAA-TA--------AGGCT-CAG-----
i Cebus_olivaceus.k141_1404781                           C 0 T 37
s Cebus_unicolor.k141_1654760                                64785 17 -     89041 C----------------------------C-GCAAA-TA--------AGGCT-CAG-----
i Cebus_unicolor.k141_1654760                            C 0 T 37
s Cephalopachus_bancanus.k141_72622                           1218 17 -      1636 C----------------------------T-GAAAA-TA--------AGGCT-AAC-----
i Cephalopachus_bancanus.k141_72622                      C 0 T 37
s Ceratotherium_simum.JH767749.1                          15489830 17 -  27778364 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Ceratotherium_simum.JH767749.1                         C 0 T 37
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16663 17 +     27315 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 T 37
s Cercocebus_atys.KQ010504.1                                138351 17 -   4669795 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercocebus_atys.KQ010504.1                             C 0 T 23
s Cercocebus_chrysogaster.k141_1522556                       42091 17 +     47900 C----------------------------T-GCAAA-TA--------TGGCT-GAG-----
i Cercocebus_chrysogaster.k141_1522556                   C 0 T 23
s Cercocebus_lunulatus.k141_2779015                          41924 17 -     44860 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercocebus_lunulatus.k141_2779015                      C 0 T 23
s Cercocebus_torquatus.k141_2159127                          41907 17 -    148725 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercocebus_torquatus.k141_2159127                      C 0 T 23
s Cercopithecus_ascanius.k141_3120866                        25005 17 -     40656 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_ascanius.k141_3120866                    C 0 T 30
s Cercopithecus_cephus.k141_4183004                           4974 17 +     20796 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_cephus.k141_4183004                      C 0 T 37
s Cercopithecus_diana.k141_132293                             9164 17 -     17524 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_diana.k141_132293                        C 0 T 37
s Cercopithecus_hamlyni.k141_566925                          24886 17 -     34525 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_hamlyni.k141_566925                      C 0 T 37
s Cercopithecus_lowei.k141_2101310                            9595 17 -     25376 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_lowei.k141_2101310                       C 0 T 37
s Cercopithecus_albogularis.ctg5                                  362194 17 -  39242232 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_albogularis.ctg5                               C 0 T 37
s Cercopithecus_mona.ctg39                                  267902 17 +  21565898 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_mona.ctg39                               C 0 T 37
s Cercopithecus_neglectus.k141_858615                        29363 17 -     45857 C----------------------------T-GCAAA-TA--------TGGCT-GAG-----
i Cercopithecus_neglectus.k141_858615                    C 0 T 37
s Cercopithecus_nictitans.k141_2995370                       25183 17 -     32606 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_nictitans.k141_2995370                   C 0 T 37
s Cercopithecus_petaurista.k141_42573                         1336 17 +      8499 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_petaurista.k141_42573                    C 0 T 37
s Cercopithecus_pogonias.k141_6079                           22855 17 +     70610 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_pogonias.k141_6079                       C 0 T 37
s Cercopithecus_roloway.k141_3012935                         19780 17 +     36323 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_roloway.k141_3012935                     C 0 T 37
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10478 17 -     19938 c----------------------------t-gcaaa-ta--------tggtt-cac-----
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 T 37
s Cheirogaleus_major.k141_666340                             28305 17 -     33796 C----------------------------T-GCCAA-TA--------TGGCT-AAT-----
i Cheirogaleus_major.k141_666340                         C 0 T 36
s Cheirogaleus_medius.k141_759766                             2835 17 -     15404 c----------------------------t-gccaa-ta--------tggct-aat-----
i Cheirogaleus_medius.k141_759766                        C 0 T 36
s Cheracebus_lucifer.k141_2312002                             6697 17 -     32913 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cheracebus_lucifer.k141_2312002                        C 0 T 37
s Cheracebus_lugens.k141_1179667                             17110 17 -     40346 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cheracebus_lugens.k141_1179667                         C 0 T 37
s Cheracebus_regulus.k141_471822                             17374 17 +    216457 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cheracebus_regulus.k141_471822                         C 0 T 37
s Cheracebus_torquatus.k141_890198                           17158 17 +     39636 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cheracebus_torquatus.k141_890198                       C 0 T 37
s Chiropotes_albinasus.k141_1946120                           1544 17 +      5346 C----------------------------T-GCAAA-TA--------CAGCT-CAG-----
i Chiropotes_albinasus.k141_1946120                      C 0 T 37
s Chiropotes_israelita.k141_313004                           40229 17 -    112038 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Chiropotes_israelita.k141_313004                       C 0 T 37
s Chiropotes_sagulatus.k141_1113111                           5801 17 +     34062 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Chiropotes_sagulatus.k141_1113111                      C 0 T 37
s Chlorocebus_aethiops.ctg25                                340677 17 +  18827391 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Chlorocebus_aethiops.ctg25                             C 0 T 37
s Chlorocebus_pygerythrus.k141_3063162                        7222 17 -     44032 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Chlorocebus_pygerythrus.k141_3063162                   C 0 T 37
s Chlorocebus_sabaeus.CM001947.1                            302002 17 - 135778131 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Chlorocebus_sabaeus.CM001947.1                         C 0 T 37
s Colobus_angolensis.KN981557.1                             406456 17 -   2368649 C----------------------------T-GCACA-CA--------CGGCG-AAG-----
i Colobus_angolensis.KN981557.1                          C 0 T 37
s Colobus_guereza.LG01                                      376333 17 - 200372422 c----------------------------t-gcaca-ta--------cggcg-aag-----
i Colobus_guereza.LG01                                   C 0 T 37
s Colobus_polykomos.k141_1559707                              6345 17 -      6605 C----------------------------T-GCACA-TA--------CGGCG-AAG-----
i Colobus_polykomos.k141_1559707                         C 0 T 37
s Condylura_cristata.JH655891.1                           35804967 17 +  53390261 t----------------------------c-ataaa-ta--------cagca-aat-----
i Condylura_cristata.JH655891.1                          C 0 T 37
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           410 17 -      8242 c----------------------------t-gcaaa-ta--------taact-gtt-----
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 T 37
s Cricetomys_gambianus.CriGam_scaffold_14425                 39989 17 -     83289 T----------------------------T-GAAAG-TA--------GGGCT-AAT-----
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 T 37
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1587 17 +     87169 c----------------------------t-gcaaa-ta--------tggct-gat-----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 T 37
s Ctenodactylus_gundi.CteGun_scaffold_65                    642532 17 -   1526836 C----------------------------T-GCTAA-TA--------CAGGT-AAT-----
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 T 38
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2610 17 +     50838 C----------------------------T-ACAAA-TG--------AAGAT-AAT-----
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 T 35
s Cuniculus_paca.CunPac_flattened_line_7025                   1262 17 +     36344 C----------------------------T-ACAAA-CA--------AAGAT-AAG-----
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 T 35
s Dasypus_novemcinctus.JH564415.1                          2107816 17 -   2246927 c----------------------------t-gcacg-ca--------tggtc-cac-----
i Dasypus_novemcinctus.JH564415.1                        C 0 T 37
s Daubentonia_madagascariensis.ctg71                        290254 17 +  12879189 c----------------------------t-gcaaa-ta--------cggct-aac-----
i Daubentonia_madagascariensis.ctg71                     C 0 T 25
s Desmodus_rotundus.KZ672289.1                            11862391 17 -  20541912 g----------------------------t-gcaaa-ta--------cggct-aaa-----
i Desmodus_rotundus.KZ672289.1                           C 0 T 29
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662122 17 -   1390856 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 T 37
s Diceros_bicornis.DicBicMic_scaffold_5955                  136907 17 -    198055 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 T 37
s Dinomys_branickii.DinBra_scaffold_10381                    95994 17 -    115145 C----------------------------T-ATAGA-TA--------TAGAC-AAG-----
i Dinomys_branickii.DinBra_scaffold_10381                C 0 T 35
s Dipodomys_ordii.KN672350.1                              18948251  3 -  37912305 C----------------------------T-G-----------------------------
i Dipodomys_ordii.KN672350.1                             I 59 T 82
s Dipodomys_stephensi.DipSte_scaffold_89095                   3198  3 -     10735 c----------------------------t-g-----------------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 59 T 82
s Dolichotis_patagonum.DolPat_scaffold_80628                  7589 17 +     14636 C----------------------------T-ATATA-CA--------AAGGT-AAG-----
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 T 34
s Echinops_telfairi.JH980293.1                            62851334 17 - 111700974 t----------------------------a-gcaaa-tg--------tggct-cat-----
i Echinops_telfairi.JH980293.1                           C 0 T 40
s Eidolon_helvum.AWHC01266696.1                               3959 17 +     19438 c----------------------------t-tcaaa-ta--------tggct-aat-----
i Eidolon_helvum.AWHC01266696.1                          C 0 T 37
s Ellobius_lutescens.LOEQ01008920.1                          28218 18 +    110024 T----------------------------T-GCAAGTTA--------GGGCC-AAG-----
i Ellobius_lutescens.LOEQ01008920.1                      C 0 T 34
s Ellobius_talpinus.LOJH01026522.1                           10182 18 +     18970 T----------------------------T-GCAAGTTA--------GGGCT-AAG-----
i Ellobius_talpinus.LOJH01026522.1                       C 0 T 34
s Enhydra_lutris.KZ291758.1                               24913619 17 +  41312741 c----------------------------t-acaaa-ta--------tggct-aac-----
i Enhydra_lutris.KZ291758.1                              C 0 T 37
s Eptesicus_fuscus.JH977646.1                             12575996 44 +  14770903 ctctgttactatagtgagacactac-ttct-gcaaa-ga--------tggct-aat-----
i Eptesicus_fuscus.JH977646.1                            C 0 T 45
s Equus_asinus.JREZ01000139.1                              3039103 17 -   4378816 c----------------------------t-gcaaa-tc--------tggct-aac-----
i Equus_asinus.JREZ01000139.1                            C 0 T 36
s Equus_caballus.CM000403.2                               21373037 17 +  39960074 c----------------------------t-gcaaa-tc--------tggct-aac-----
i Equus_caballus.CM000403.2                              C 0 T 36
s Equus_przewalskii.KK951119.1                              409823 17 -    498745 c----------------------------t-gcaaa-tc--------tggct-aac-----
i Equus_przewalskii.KK951119.1                           C 0 T 36
s Erythrocebus_patas.Contig38                               260200 17 +  21539334 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Erythrocebus_patas.Contig38                            C 0 T 37
s Felis_catus.CM001381.2                                 186243961 17 - 206538554 C----------------------------T-GCAAA-TA--------GGGCT-AAT-----
i Felis_catus.CM001381.2                                 C 0 T 37
s Felis_catus_fca126.CM031415.1                          185113743 17 - 205367284 C----------------------------T-GCAAA-TA--------GGGCT-AAT-----
i Felis_catus_fca126.CM031415.1                          C 0 T 37
s Felis_nigripes.FelNig_flattened_line_31944                 25091 17 -     30238 c----------------------------t-gcaaa-ta--------gggct-aat-----
i Felis_nigripes.FelNig_flattened_line_31944             C 0 T 37
s Galago_moholi.ctg3793                                     121373 16 -    137831 C----------------------------T--CAAA-TA--------TGGCT-AAT-----
i Galago_moholi.ctg3793                                  C 0 T 36
s Galago_senegalensis.k141_991736                             4914 16 +     22493 C----------------------------T--CAAA-TA--------TGGCT-AAT-----
i Galago_senegalensis.k141_991736                        C 0 T 36
s Galagoides_demidoff.k141_561628                            16969 17 -     32986 C----------------------------T-GCAAA-TA--------ATCCT-AAT-----
i Galagoides_demidoff.k141_561628                        C 0 T 37
s Galeopterus_variegatus.GalVar_scaffold_74466               16720 17 +     18121 c----------------------------t-gtaaa-ta--------tggct-aat-----
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 T 37
s Gorilla_beringei.k141_3358147                               2371 22 -      8343 c----------------------------t-gcaaa-ta--------tggct-aagtcttc
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251861 22 - 186649187 C----------------------------T-GCAGA-TA--------CGGCT-Aagtcttc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28092 17 -    327341 C----------------------------T-GCAAA-TA--------TGGCG-GAC-----
i Helogale_parvula.HelPar_flattened_line_2585            C 0 T 33
s Heterocephalus_glaber.JH602082.1                         1924690 17 -  22651954 c----------------------------t-ataaa-ta--------tagct-aag-----
i Heterocephalus_glaber.JH602082.1                       C 0 T 35
s Hipposideros_armiger.JXIK01000431.1                      1547860 17 -   1711038 c----------------------------t-gcaaa-ta--------tggct-gat-----
i Hipposideros_armiger.JXIK01000431.1                    C 0 T 37
s Hipposideros_galeritus.HipGal_scaffold_23202               47176 17 +     49977 c----------------------------t-gcaaa-ta--------tggtt-gat-----
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 T 37
s Hoolock_leuconedys.ctg274                                    140128 17 -    630532 C----------------------------T-GCAGA-TA--------CAGCT-AAG-----
i Hoolock_leuconedys.ctg274                                 C 0 T 37
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66573 17 +     83186 C----------------------------T-GCAAA-TA--------TGGCT-GAT-----
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 T 37
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68932 17 +    143317 C----------------------------T-ATAAA-TA--------AAGGT-AAG-----
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 T 35
s Hylobates_agilis.k141_1155965                               3163 17 +     12352 c----------------------------t-gaaga-ta--------cggct-aag-----
i Hylobates_agilis.k141_1155965                          C 0 T 37
s Hylobates_klossii.k141_738755                              10346 17 +     55766 c----------------------------t-gaaga-ta--------cggct-aag-----
i Hylobates_klossii.k141_738755                          C 0 T 37
s Hylobates_pileatus_b.LG02                                       2049465 17 + 191637585 t----------------------------t-gcaga-ta--------cagct-aag-----
i Hylobates_pileatus_b.LG02                                     C 0 T 37
s Hylobates_pileatus_a.tarseq_633                            7798820 17 +  11177569 C----------------------------T-GAAGA-TA--------CGGCT-AAG-----
i Hylobates_pileatus_a.tarseq_633                          C 0 T 37
s Ictidomys_tridecemlineatus.JH393364.1                     384459 17 +   7955117 A----------------------------T-TCAAA-TG--------TGGCT-AAT-----
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 T 33
s Indri_indri.k141_4600452                                    1369 25 -      1527 C----------------------------T-GCAAA-TAGTTGCTTCTGGCT-AAT-----
i Indri_indri.k141_4600452                               C 0 T 44
s Jaculus_jaculus.JH725527.1                               1236878  7 +   9596543 -------------------------------------------------GAAAATT-----
i Jaculus_jaculus.JH725527.1                             I 2 T 23
s Lagothrix_lagothricha.k141_246028                          40949 17 +    110728 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Lagothrix_lagothricha.k141_246028                      C 0 T 37
s Lasiurus_borealis.LasBor_scaffold_16567                    59473 44 -     65777 ctctgtttctatagtgagacact-ccttct-gcaaa-ga--------tggct-aat-----
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 T 45
s Leontocebus_fuscicollis.k141_2994775                        1629 17 -     13097 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Leontocebus_fuscicollis.k141_2994775                   C 0 T 37
s Leontocebus_illigeri.k141_2951200                           1580 17 +      5940 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Leontocebus_illigeri.k141_2951200                      C 0 T 37
s Leontocebus_nigricollis.k141_3905062                        1211 17 -      5717 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Leontocebus_nigricollis.k141_3905062                   C 0 T 37
s Leontopithecus_chrysomelas.k141_1327670                     7844 17 -     11567 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Leontopithecus_chrysomelas.k141_1327670                C 0 T 37
s Leontopithecus_rosalia.k141_349454                          9225 17 -     12945 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Leontopithecus_rosalia.k141_349454                     C 0 T 37
s Lepilemur_ankaranensis.k141_567626                          6661 17 +     29618 C----------------------------T-GCGAA-TA--------TGGCT-AAT-----
i Lepilemur_ankaranensis.k141_567626                     C 0 T 36
s Lepilemur_dorsalis.k141_387009                              6658 17 +     31569 C----------------------------T-GCGAA-TA--------TGGCT-AAT-----
i Lepilemur_dorsalis.k141_387009                         C 0 T 36
s Lepilemur_ruficaudatus.k141_330196                          6668 17 +     24756 c----------------------------t-gcgaa-ta--------tggct-aat-----
i Lepilemur_ruficaudatus.k141_330196                     C 0 T 36
s Lepilemur_septentrionalis.k141_360456                       6662 17 +     16388 C----------------------------T-GCGAA-TA--------TGGCT-AAT-----
i Lepilemur_septentrionalis.k141_360456                  C 0 T 36
s Leptonychotes_weddellii.KB714746.1                        810969 17 -   3914936 c----------------------------t-gcaaa-ta--------tggcc-aat-----
i Leptonychotes_weddellii.KB714746.1                     C 0 T 37
s Lophocebus_aterrimus.ctg367                               330304 17 -   1826925 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Lophocebus_aterrimus.ctg367                            C 0 T 23
s Loris_lydekkerianus.k141_2031736                            7367 17 +     19643 T----------------------------T-GCAAA-TA--------TGGCT-AAG-----
i Loris_lydekkerianus.k141_2031736                       C 0 T 37
s Loris_tardigradus.ctg83                                  5041027 17 -   6120653 T----------------------------T-GCAAA-TA--------TGGCT-AAG-----
i Loris_tardigradus.ctg83                                C 0 T 37
s Lycaon_pictus.CM007581.1                                41612356 17 +  59628241 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Lycaon_pictus.CM007581.1                               C 0 T 37
s Macaca_arctoides.k141_1757516                              42621 17 -     61512 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_arctoides.k141_1757516                          C 0 T 23
s Macaca_assamensis.Contig5                                 370282 17 -  60120075 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_assamensis.Contig5                              C 0 T 37
s Macaca_cyclopis.k119_263443                                22537 17 +     30207 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_cyclopis.k119_263443                            C 0 T 23
s Macaca_fascicularis.k141_1397292                           19640 17 -     24934 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_fascicularis.k141_1397292                       C 0 T 27
s Macaca_fuscata.k119_546792                                 22489 17 +     30527 C----------------------------T-GCAAA-TA--------CTGCT-GAG-----
i Macaca_fuscata.k119_546792                             C 0 T 37
s Macaca_leonina.k141_321385                                 33679 17 -     50087 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_leonina.k141_321385                             C 0 T 37
s Macaca_maura.k141_1103459                                  43450 17 +     51645 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_maura.k141_1103459                              C 0 T 70
s Macaca_mulatta.NC_041758.1                                412618 17 - 187317192 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_mulatta.NC_041758.1                             C 0 T 37
s Macaca_nemestrina.KQ007038.1                              396841 17 +  25927173 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_nemestrina.KQ007038.1                           C 0 T 37
s Macaca_nigra.k141_2818840                                  46005 17 -     62418 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_nigra.k141_2818840                              C 0 T 37
s Macaca_radiata.k141_3557992                                22660 17 +     24253 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_radiata.k141_3557992                            C 0 T 37
s Macaca_siberu.k141_2185972                                 42481 17 +     59329 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_siberu.k141_2185972                             C 0 T 70
s Macaca_silenus.Contig273                                  268414 17 +    668171 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_silenus.Contig273                               C 0 T 37
s Macaca_thibetana.k99_41370                                 19595 17 +     21031 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_thibetana.k99_41370                             C 0 T 23
s Macaca_tonkeana.k141_339739                                  192 17 +     17132 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_tonkeana.k141_339739                            n 23 T 17
s Macroglossus_sobrinus.MacSob_scaffold_4024                220925 17 -    270270 c----------------------------t-tcaaa-ta--------aggct-aat-----
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 T 37
s Mandrillus_leucophaeus.scaffold280                        319692 17 +  24302211 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Mandrillus_leucophaeus.scaffold280                     C 0 T 23
s Mandrillus_sphinx.Contig270                               354524 17 -    752769 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Mandrillus_sphinx.Contig270                            C 0 T 23
s Manis_javanica.JSZB01003497.1                             671204 17 -    737560 c----------------------------t-gcaaa-ta--------cagct-agt-----
i Manis_javanica.JSZB01003497.1                          C 0 T 37
s Manis_pentadactyla.KN006162.1                             218495 17 +    317179 c----------------------------t-gcaaa-ta--------cagct-agt-----
i Manis_pentadactyla.KN006162.1                          C 0 T 37
s Marmota_marmota.CZRN01000018.1                           7498658 17 +  40650429 a----------------------------t-tcaaa-tg--------tggct-tat-----
i Marmota_marmota.CZRN01000018.1                         C 0 T 33
s Megaderma_lyra.MegLyr_scaffold_4542                       148114 16 +    207569 c----------------------------t-gcaaa-ta--------cggct-gt------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 T 34
s Mellivora_capensis.MelCap_flattened_line_19308             23492 17 -     74585 c----------------------------t-acaaa-ta--------tgact-aac-----
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 T 37
s Mico_argentatus.k141_582562                                 7589 17 +     17804 C----------------------------T-GCAAA-TA--------CGGCT-CGG-----
i Mico_argentatus.k141_582562                            C 0 T 37
s Mico_humeralifer.k141_1180625                               8373 17 -     12984 C----------------------------T-GCAAA-TA--------CGGCT-CGG-----
i Mico_humeralifer.k141_1180625                          C 0 T 37
s Mico_schneideri.k141_1877700                                     16324 17 -     26561 C----------------------------G-GCAAA-TA--------CGGCT-CGG-----
i Mico_schneideri.k141_1877700                                 C 0 T 37
s Microcebus_murinus.CM007674.1                           74982273 17 +  93316391 C----------------------------T-ACAAA-TA--------TGGCT-AAT-----
i Microcebus_murinus.CM007674.1                          C 0 T 36
s Microgale_talazaci.MicTal_scaffold_6613                    41650 17 +    145209 T----------------------------T-GCAAA-TG--------TGGTT-CAT-----
i Microgale_talazaci.MicTal_scaffold_6613                C 0 T 37
s Micronycteris_hirsuta.MicHir_scaffold_2233                182340 17 +    200668 c----------------------------t-tcaaa-ta--------cggct-gaa-----
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 T 35
s Miopithecus_ogouensis.k141_1534655                         19719 17 -     27822 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Miopithecus_ogouensis.k141_1534655                     C 0 T 37
s Mirounga_angustirostris.MirAng_flattened_line_54046         5979 17 +     27589 c----------------------------a-gcaaa-ta--------tggcc-aat-----
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 T 37
s Mirza_zaza.k141_766280                                     50069 16 -     62432 c----------------------------t--caaa-ta--------tggct-aat-----
i Mirza_zaza.k141_766280                                 C 0 T 18
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176519 17 +    366855 c----------------------------t-gcaga-ca--------tggct-aaa-----
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 T 37
s Mungos_mungo.MunMun_flattened_line_18455                   15846 17 -     63510 C----------------------------T-GCAAA-TA--------TGGCG-GAC-----
i Mungos_mungo.MunMun_flattened_line_18455               C 0 T 33
s Murina_feae.MurFea_scaffold_17764                          36344 44 +     47283 ctctgttactatagtgagacactac-ttct-gcaaa-ta--------cggct-aat-----
i Murina_feae.MurFea_scaffold_17764                      C 0 T 45
s Mustela_putorius.JH418006.1                             14352432 17 +  14710649 c----------------------------t-acaaa-ta--------tggct-aac-----
i Mustela_putorius.JH418006.1                            C 0 T 37
s Myotis_brandtii.KE162005.1                               9790360 44 +  10118263 ctctgttactatagtgagacactac-ttct-gcaaa-ta--------tggct-aat-----
i Myotis_brandtii.KE162005.1                             C 0 T 45
s Myotis_davidii.KB100139.1                                4384759 44 +   6019432 ctctgtttctatagtgagacactac-ttct-gcaaa-ta--------tgact-aat-----
i Myotis_davidii.KB100139.1                              C 0 T 45
s Myotis_lucifugus.GL429869.1                               380581 44 +   4330536 ctctgttactatagtgagacactac-ttct-gcaaa-ta--------tggct-aat-----
i Myotis_lucifugus.GL429869.1                            C 0 T 45
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117247 17 +    130748 c----------------------------t-gcaaa-ta--------tgatt-cat-----
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 T 36
s Nasalis_larvatus.k141_1350636                              26300 17 +     34575 C----------------------------T-GCAAA-TA--------CGGCC-AAG-----
i Nasalis_larvatus.k141_1350636                          C 0 T 37
s Neomonachus_schauinslandi.NINY01007730.1                11466366 17 -  31847680 c----------------------------t-gcaaa-ta--------tggcc-aat-----
i Neomonachus_schauinslandi.NINY01007730.1               C 0 T 37
s Noctilio_leporinus.NocLep_scaffold_7894                   125156 17 -    149072 c----------------------------t-gcaaa-ta--------cggct-act-----
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 T 31
s Nomascus_annamensis.k141_1771965                           51052 17 -    132029 C----------------------------T-GAAGA-TA--------TGGCT-AAG-----
i Nomascus_annamensis.k141_1771965                       C 0 T 37
s Nomascus_concolor.k141_735679                               7147 17 -     16345 C----------------------------T-GAAGA-TA--------TGGCT-AAG-----
i Nomascus_concolor.k141_735679                          C 0 T 37
s Nomascus_gabriellae.k141_57920                             13032 17 +     22201 C----------------------------T-GAAGA-TA--------TGGCT-AAG-----
i Nomascus_gabriellae.k141_57920                         C 0 T 37
s Nomascus_siki_b.tarseq_93                            8411316 17 -  22158432 C----------------------------T-GAAGA-TA--------TGGCT-AAG-----
i Nomascus_siki_b.tarseq_93                          C 0 T 37
s Nomascus_siki_a.k141_941534                                  23430 17 -     54323 C----------------------------T-GAAGA-TA--------TGGCT-AAG-----
i Nomascus_siki_a.k141_941534                              C 0 T 37
s Nyctereutes_procyonoides.CAJHUB010000658.1                195958 17 +   9404916 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 T 37
s Nycticebus_bengalensis.LG01                             93632658 17 + 196305487 T----------------------------T-GCAAA-TA--------TGGCT-AAG-----
i Nycticebus_bengalensis.LG01                            C 0 T 37
s Nycticebus_coucang.k141_8166032                             2047 17 +      2758 T----------------------------T-GCAAA-TA--------TGGCT-AAG-----
i Nycticebus_coucang.k141_8166032                        C 0 T 37
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560912 17 - 199412804 T----------------------------T-GCAAA-TA--------TGGCT-AAG-----
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 T 37
s Octodon_degus.JH651603.1                                11044964 17 -  11899542 t----------------------------t-acaaa-tg--------aaaat-aat-----
i Octodon_degus.JH651603.1                               C 0 T 35
s Odobenus_rosmarus.KB229312.1                             1449154 17 +   2017862 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Odobenus_rosmarus.KB229312.1                           C 0 T 37
s Ondatra_zibethicus.OndZib_scaffold_7387                    89939 18 -    140218 T----------------------------T-GCAAATTA--------GGGCT-AAT-----
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 T 39
s Onychomys_torridus.OnyTor_scaffold_2487                   104772 17 +    107918 T----------------------------G-ACAAG-TA--------TGGAT-ACT-----
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 T 37
s Orycteropus_afer.OryAfe_flattened_line_171931              11039 17 -     14239 c----------------------------t-gtaag-ta--------gggct-cat-----
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 T 37
s Otocyon_megalotis.JAEUCK010005147.1                        36997 17 +    559221 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 T 37
s Otolemur_crassicaudatus.k141_649260                        36498 17 -     51505 C----------------------------T-GCAAA-TA--------TGGCT-AAT-----
i Otolemur_crassicaudatus.k141_649260                    C 0 T 37
s Otolemur_garnettii.GL873799.1                             349512 17 +   1103335 C----------------------------T-GCAAA-TA--------TGGCT-AAA-----
i Otolemur_garnettii.GL873799.1                          C 0 T 37
s Pan_troglodytes.NBAG03003182.1                              8781 23 -     24457 c----------------------------tgGCAAA-TA--------TGGCT-AAATCTTC
i Pan_troglodytes.NBAG03003182.1                         I 140 T 23
s Panthera_onca.PanOnc_flattened_line_3271                   21912 17 -    230217 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Panthera_onca.PanOnc_flattened_line_3271               C 0 T 37
s Panthera_pardus.KV860321.1                              18459238 17 -  18783137 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Panthera_pardus.KV860321.1                             C 0 T 37
s Panthera_tigris.KE722367.1                               3969958 17 +   8748460 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Panthera_tigris.KE722367.1                             C 0 T 37
s Papio_anubis.CM001495.2                                   240532 17 - 183742232 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Papio_anubis.CM001495.2                                C 0 T 23
s Papio_cynocephalus.k141_1507553                             6996 17 +     21308 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Papio_cynocephalus.k141_1507553                        C 0 T 23
s Papio_hamadryas.Contig39                                  288035 17 -  20919399 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Papio_hamadryas.Contig39                               C 0 T 23
s Papio_kindae.k141_2214839                                  19651 17 -     27687 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Papio_kindae.k141_2214839                              C 0 T 23
s Papio_papio.k141_799093                                    12787 17 +     16796 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Papio_papio.k141_799093                                C 0 T 23
s Papio_ursinus.k141_2278143                                 19597 17 -     23640 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Papio_ursinus.k141_2278143                             C 0 T 23
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12572 17 +     78924 c----------------------------t-gcaaa-ta--------tagct-aat-----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 T 37
s Perodicticus_ibeanus.k141_1921260                          22752 17 +     31479 C----------------------------T-GCAAA-TA--------TGCCT-AAG-----
i Perodicticus_ibeanus.k141_1921260                      C 0 T 37
s Perodicticus_potto.k141_1854441                            15122 17 -     24908 C----------------------------T-GCAAA-TA--------TGCCT-AAG-----
i Perodicticus_potto.k141_1854441                        C 0 T 37
s Perognathus_longimembris.PerPac_flattened_line_28053       37452  3 +     38305 T----------------------------T-G-----------------------------
i Perognathus_longimembris.PerPac_flattened_line_28053   I 60 T 83
s Peromyscus_maniculatus.KI615324.1                         244417 17 +  18517816 T----------------------------G-ACAAG-TA--------GGGCT-ACT-----
i Peromyscus_maniculatus.KI615324.1                      C 0 T 36
s Petromus_typicus.PetTyp_scaffold_17301                     29644 17 -     56120 C----------------------------T-CTAAC-TA--------TAGCT-AAA-----
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 T 35
s Piliocolobus_badius.k141_2495623                            6451 17 +      7560 C----------------------------T-GCAAA-TA--------CGGCC-AAG-----
i Piliocolobus_badius.k141_2495623                       C 0 T 37
s Piliocolobus_gordonorum.k141_905727                        62159 17 -     63152 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Piliocolobus_gordonorum.k141_905727                    C 0 T 37
s Piliocolobus_kirkii.k141_579682                            44758 17 +     45295 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Piliocolobus_kirkii.k141_579682                        C 0 T 37
s Piliocolobus_tephrosceles.PDMG02034973.1                    2436 17 +      5735 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 T 37
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              519 45 +     22231 ctctgtcactataatgagacactaccttct-gcaaa-ga--------tggct-aat-----
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 T 46
s Pithecia_albicans.k141_1239476                             62579 17 +    207309 C----------------------------T-GCAAA-TA--------CGGCT-CCG-----
i Pithecia_albicans.k141_1239476                         C 0 T 37
s Pithecia_chrysocephala.k141_785207                          3675 17 -     25401 C----------------------------T-GCAAA-TA--------CGGCT-CCG-----
i Pithecia_chrysocephala.k141_785207                     C 0 T 27
s Pithecia_hirsuta.k141_640380                               29414 17 +     58159 C----------------------------T-GCAAA-TA--------CGGCT-CCG-----
i Pithecia_hirsuta.k141_640380                           C 0 T 37
s Pithecia_mittermeieri.k141_1280039                         29690 17 +     63561 C----------------------------T-GCAAA-TA--------CGGCT-CCG-----
i Pithecia_mittermeieri.k141_1280039                     C 0 T 37
s Pithecia_pissinattii.k141_878371                           29453 17 +     51148 C----------------------------T-GCAAA-TA--------CGGCT-CCG-----
i Pithecia_pissinattii.k141_878371                       C 0 T 37
s Pithecia_pithecia.tarseq_165                              554422 17 -   4542175 C----------------------------T-GCAAA-TA--------CGGCT-CCG-----
i Pithecia_pithecia.tarseq_165                           C 0 T 27
s Pithecia_vanzolinii.k141_1369553                           29437 17 +     51125 C----------------------------T-GCAAA-TA--------CGGCT-CCG-----
i Pithecia_vanzolinii.k141_1369553                       C 0 T 37
s Plecturocebus_bernhardi.k141_2549090                        5868 17 +     39866 C----------------------------T-GCAGA-TA--------TGGCT-CAG-----
i Plecturocebus_bernhardi.k141_2549090                   C 0 T 37
s Plecturocebus_brunneus.k141_862875                           953 17 -      9282 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Plecturocebus_brunneus.k141_862875                     C 0 T 37
s Plecturocebus_caligatus.k141_1382851                       40357 17 -     87950 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Plecturocebus_caligatus.k141_1382851                   C 0 T 37
s Plecturocebus_cinerascens.k141_1164729                     40750 17 -     88961 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Plecturocebus_cinerascens.k141_1164729                 C 0 T 37
s Plecturocebus_cupreus.k141_2351393                          5449 17 -     39403 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Plecturocebus_cupreus.k141_2351393                     C 0 T 37
s Plecturocebus_dubius.k141_1058799                          40403 17 +     87928 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Plecturocebus_dubius.k141_1058799                      C 0 T 37
s Plecturocebus_grovesi.k141_2013005                          5446 17 -     60166 C----------------------------T-GCAAA-TA--------TGGCT-CAG-----
i Plecturocebus_grovesi.k141_2013005                     C 0 T 37
s Plecturocebus_hoffmannsi.k141_3303950                      12382 17 -     67232 C----------------------------T-GCAGA-TA--------TGGCT-CAG-----
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 T 37
s Plecturocebus_miltoni.k141_349282                          40298 17 -     90634 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Plecturocebus_miltoni.k141_349282                      C 0 T 37
s Plecturocebus_moloch.k141_1031110                          41766 17 +     89403 C----------------------------T-GCAAA-TA--------TGGCT-CAG-----
i Plecturocebus_moloch.k141_1031110                      C 0 T 37
s Pongo_abelii.CM009266.2                                   174877 22 - 189387572 C----------------------------T-GCAGA-TA--------TGGCT-AAgtcttc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189875 22 -   9816681 C----------------------------T-GCAGA-TA--------CGGCT-AAGTCTTC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24933 17 +     69807 C----------------------------T-GCAAA-TA--------CGGCC-AAG-----
i Presbytis_comata.k141_1230337                          C 0 T 37
s Presbytis_mitrata.k141_584736                              42128 17 -     80239 c----------------------------t-gcaaa-ta--------cggcc-aag-----
i Presbytis_mitrata.k141_584736                          C 0 T 37
s Propithecus_coquerelli.NW_012148875.1                    1563750 17 -   2598838 C----------------------------T-GCAAA-TA--------TGGCT-AAT-----
i Propithecus_coquerelli.NW_012148875.1                  C 0 T 36
s Propithecus_coronatus.k141_209299                           1386 17 -      7103 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Propithecus_coronatus.k141_209299                      C 0 T 36
s Propithecus_diadema.k141_153680                             1983 17 -     11706 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Propithecus_diadema.k141_153680                        C 0 T 36
s Propithecus_edwardsi.k141_635656                            5719 17 -     30655 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Propithecus_edwardsi.k141_635656                       C 0 T 36
s Propithecus_perrieri.k141_1496898                          32044 17 +     46564 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Propithecus_perrieri.k141_1496898                      C 0 T 36
s Propithecus_tattersalli.k141_1127767                       92315 17 -     98465 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Propithecus_tattersalli.k141_1127767                   C 0 T 36
s Propithecus_verreauxi.k141_1047036                          5952 17 +     35169 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Propithecus_verreauxi.k141_1047036                     C 0 T 36
s Pteronotus_parnellii.KE847780.1                            49585 17 -     66298 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Pteronotus_parnellii.KE847780.1                        C 0 T 37
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2210 17 -     18639 c----------------------------t-acaaa-ta--------tggct-aac-----
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 T 37
s Pteropus_alecto.KB030862.1                               5838553 17 -  28871421 c----------------------------t-tcaaa-ta--------tggct-agt-----
i Pteropus_alecto.KB030862.1                             C 0 T 37
s Pteropus_vampyrus.KN525825.1                             3535119 17 -   4952924 c----------------------------t-tcaaa-ta--------tggct-agt-----
i Pteropus_vampyrus.KN525825.1                           C 0 T 37
s Puma_concolor.QAVW01001104.1                            18096558 17 +  38429054 c----------------------------t-gcaaa-ta--------gggct-aat-----
i Puma_concolor.QAVW01001104.1                           C 0 T 37
s Pygathrix_cinerea.k141_1153803                             24324 17 +     91421 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Pygathrix_cinerea.k141_1153803                         C 0 T 37
s Pygathrix_nigripes_b.ctg100                                  150817 17 -   7812017 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Pygathrix_nigripes_b.ctg100                               C 0 T 37
s Pygathrix_nigripes_a.k141_215492                              5194 17 +     72585 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Pygathrix_nigripes_a.k141_215492                         C 0 T 37
s Rhinolophus_sinicus.LVEH01000134.1                       2911208 17 +   3329780 c----------------------------t-gcaaa-ta--------tggtt-ggt-----
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 T 37
s Rhinopithecus_bieti.k119_221883                            26153 17 +     27361 c----------------------------t-gcaaa-tg--------cggct-aag-----
i Rhinopithecus_bieti.k119_221883                        C 0 T 36
s Rhinopithecus_roxellana.NC_044550.1                    104119501 17 + 195417433 C----------------------------T-GCAAA-TG--------CGGCT-AAG-----
i Rhinopithecus_roxellana.NC_044550.1                    C 0 T 36
s Rhinopithecus_strykeri.ctg102                             233761 17 -   7961872 c----------------------------t-gcaaa-tg--------cggct-aag-----
i Rhinopithecus_strykeri.ctg102                          C 0 T 36
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72536 17 -    116970 c----------------------------t-tcaaa-ta--------tggct-aat-----
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 T 37
s Saguinus_bicolor.k141_1429097                               1542 17 +     27962 C----------------------------T-GCAAA-TA--------CAGCT-CAG-----
i Saguinus_bicolor.k141_1429097                          C 0 T 37
s Saguinus_geoffroyi.k141_3779887                             1550 17 +      6077 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Saguinus_geoffroyi.k141_3779887                        C 0 T 37
s Saguinus_imperator.k141_1898058                             1569 17 +      5971 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Saguinus_imperator.k141_1898058                        C 0 T 37
s Saguinus_inustus.k141_2469308                               1623 17 +      5932 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Saguinus_inustus.k141_2469308                          C 0 T 37
s Saguinus_labiatus.k141_1571581                              1768 17 -      2099 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Saguinus_labiatus.k141_1571581                         C 0 T 37
s Saguinus_midas.LG03                                       388890 17 - 209938924 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Saguinus_midas.LG03                                    C 0 T 37
s Saguinus_mystax.k141_8077960                                1571 17 +      5979 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Saguinus_mystax.k141_8077960                           C 0 T 37
s Saguinus_oedipus.k141_1466288                               1937 17 -      4301 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Saguinus_oedipus.k141_1466288                          C 0 T 37
s Sapajus_apella.ctg103                                     236025 17 +   5703754 C----------------------------C-GCAAA-TA--------CGGCT-CAG-----
i Sapajus_apella.ctg103                                  C 0 T 37
s Sapajus_macrocephalus.k141_796559                           5615 17 +     21866 C----------------------------C-GCAAA-TA--------CGGCT-CAG-----
i Sapajus_macrocephalus.k141_796559                      C 0 T 37
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113745 17 +    313613 t----------------------------c-ataat-tg--------tggca-aat-----
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 T 37
s Semnopithecus_entellus.k141_158471                         22641 17 +     27374 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Semnopithecus_entellus.k141_158471                     C 0 T 37
s Semnopithecus_hypoleucos.k141_1910531                      26160 17 +     58920 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Semnopithecus_hypoleucos.k141_1910531                  C 0 T 37
s Semnopithecus_johnii.k141_843753                           12656 17 -     45317 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Semnopithecus_johnii.k141_843753                       C 0 T 37
s Semnopithecus_priam.k141_714795                            20314 17 -     42441 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Semnopithecus_priam.k141_714795                        C 0 T 37
s Semnopithecus_schistaceus.k141_1432920                     22994 17 -     29113 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Semnopithecus_schistaceus.k141_1432920                 C 0 T 37
s Semnopithecus_vetulus.k141_244474                          26063 17 -     48123 C----------------------------T-GCAAA-TA--------CGCCT-AAG-----
i Semnopithecus_vetulus.k141_244474                      C 0 T 37
s Sigmodon_hispidus.SigHis_scaffold_20193                    45983 17 +     77746 T----------------------------T-GCAAG-GA--------GGGCT-TAT-----
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 T 35
s Solenodon_paradoxus.SolPar_flattened_line_126            1856061 17 -   1910179 c----------------------------c-gctaa-ta--------agact-aat-----
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 T 38
s Spermophilus_dauricus.KZ294078.1                         1866028 17 +   3870691 A----------------------------T-TCAAA-TG--------TGGCT-AAT-----
i Spermophilus_dauricus.KZ294078.1                       C 0 T 33
s Spilogale_gracilis.SpiGra_flattened_line_13525              4207 17 -     97271 c----------------------------t-acaga-ta--------tggct-aac-----
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 T 37
s Suricata_suricatta.SurSur_flattened_line_6629             122257 17 +    196729 C----------------------------T-GCAAA-TA--------TGGTG-GAT-----
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 T 33
s Symphalangus_syndactylus.tarseq_199                       388288 17 +   1523678 C----------------------------T-GAAGA-TA--------CGGCT-AAG-----
i Symphalangus_syndactylus.tarseq_199                    C 0 T 37
s Tadarida_brasiliensis.TadBra_scaffold_54991                11360 17 +     22964 c----------------------------t-tcaaa-ta--------tggct-aat-----
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 T 18
s Tamandua_tetradactyla.TamTet_scaffold_224794                 365 17 +      5583 c----------------------------t-gcaaa-ta--------tgatt-cat-----
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 T 36
s Tapirus_indicus.TapInd_scaffold_7432                      189083 17 +    199430 c----------------------------t-gcaaa-tt--------tggct-aat-----
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 T 37
s Tapirus_terrestris.TapTer_scaffold_755                    103039 17 -    539355 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 T 37
s Tarsius_lariang.k141_1780720                                4738 17 +      6850 C----------------------------T-GAAAA-TA--------AGGCT-AAC-----
i Tarsius_lariang.k141_1780720                           C 0 T 37
s Tarsius_wallacei.k141_226975                                4777 17 +     20590 C----------------------------T-GAAAA-TA--------AGGCT-AAC-----
i Tarsius_wallacei.k141_226975                           C 0 T 37
s Theropithecus_gelada.CM009954.1                           350518 17 - 186847797 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Theropithecus_gelada.CM009954.1                        C 0 T 23
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              21974 17 -     33621 C----------------------------T-CTAAA-TA--------TAGCT-AAA-----
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 T 35
s Tolypeutes_matacus.TolMat_scaffold_31955                   17486 17 -     31044 c----------------------------t-gcaaa-ta--------tggtt-cac-----
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 T 37
s Tonatia_saurophila.TonSau_scaffold_294                    477403 17 -    610378 c----------------------------t-gcaaa-ta--------cagct-gaa-----
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 T 37
s Trachypithecus_auratus.k141_1189070                        18205 17 +     26378 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_auratus.k141_1189070                    C 0 T 37
s Trachypithecus_crepusculus.k141_539312                     30889 17 -     78344 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_crepusculus.k141_539312                 C 0 T 37
s Trachypithecus_cristatus.k141_180416                       17526 17 +     25722 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_cristatus.k141_180416                   C 0 T 37
s Trachypithecus_francoisi.k141_1453105                      25751 17 -     62838 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_francoisi.k141_1453105                  C 0 T 37
s Trachypithecus_geei.k141_1001272                           25868 17 +     46913 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_geei.k141_1001272                       C 0 T 37
s Trachypithecus_germaini.k141_57262                          6676 17 -     28527 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_germaini.k141_57262                     C 0 T 37
s Trachypithecus_hatinhensis.k141_31479                      27690 17 -     64340 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_hatinhensis.k141_31479                  C 0 T 37
s Trachypithecus_laotum.k141_928651                          25727 17 -     63452 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_laotum.k141_928651                      C 0 T 37
s Trachypithecus_leucocephalus.k141_96450                     7170 17 +     22490 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_leucocephalus.k141_96450                C 0 T 37
s Trachypithecus_melamera.k141_591572                          598 17 -      6147 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_melamera.k141_591572                    C 0 T 37
s Trachypithecus_obscurus.k141_848057                         7592 17 -     13050 c----------------------------t-gcaaa-ta--------cggct-aag-----
i Trachypithecus_obscurus.k141_848057                    C 0 T 37
s Trachypithecus_phayrei.ctg124                             252831 17 -   6242583 c----------------------------t-gcaaa-ta--------cggct-aag-----
i Trachypithecus_phayrei.ctg124                          C 0 T 37
s Trachypithecus_pileatus.k141_2862967                       58562 17 +     59866 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_pileatus.k141_2862967                   C 0 T 37
s Tupaia_chinensis.KB320699.1                              1831326 17 -   4065304 t----------------------------t-gcaaa-ta--------tctct-act-----
i Tupaia_chinensis.KB320699.1                            C 0 T 37
s Tupaia_tana.TupTan_flattened_line_394                       5842 17 -     70247 t----------------------------t-gcaaa-ta--------tctgt-aat-----
i Tupaia_tana.TupTan_flattened_line_394                  C 0 T 37
s Uropsilus_gracilis.UroGra_scaffold_7153                   104971 17 -    105689 c----------------------------c-acaaa-ta--------cagca-aat-----
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 T 37
s Ursus_maritimus.KK499267.1                                179327 17 +   5085361 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Ursus_maritimus.KK499267.1                             C 0 T 37
s Varecia_rubra.k141_787544                                  22814 17 -     30710 T----------------------------T-GCATA-TA--------TGGCT-AAT-----
i Varecia_rubra.k141_787544                              C 0 T 36
s Varecia_variegata.k141_289850                              21721 17 -    147434 t----------------------------t-gcaaa-ta--------tggct-aat-----
i Varecia_variegata.k141_289850                          C 0 T 36
s Vulpes_lagopus.VulLag_flattened_line_12041                102721 17 -    112863 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 T 37
s Xerus_inauris.XerIna_scaffold_2302                        171786 17 -    224448 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Xerus_inauris.XerIna_scaffold_2302                     C 0 T 34
s Zalophus_californianus.ZalCal_flattened_line_17732         26374 17 -     86975 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 T 37
s Zapus_hudsonius.ZapHud_scaffold_230229                      1042  6 +      2695 -------------------------------------------------GAA-ACT-----
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 2 T 28
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2031 5 +     36723 tcctt
s Gorilla_beringei.k141_3358147                               2393 5 -      8343 tcctt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251883 5 - 186649187 tcctt
i Gorilla_gorilla.LT578341.1                             C 0 T 47
s Pan_troglodytes.CM009242.2                               1469770 2 - 189151597 tc---
i Pan_troglodytes.CM009242.2                             I 22 I 3
s Pongo_abelii.CM009266.2                                   174899 5 - 189387572 tcctt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189897 5 -   9816681 TCCTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991 35 -     33621 T
e Petromus_typicus.PetTyp_scaffold_17301                     29661 35 -     56120 T
e Perognathus_longimembris.PerPac_flattened_line_28053       37455 83 +     38305 T
e Octodon_degus.JH651603.1                                11044981 35 -  11899542 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949 35 +    143317 T
e Heterocephalus_glaber.JH602082.1                         1924707 35 -  22651954 T
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606 34 +     14636 T
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201 82 -     10735 T
e Dipodomys_ordii.KN672350.1                              18948254 82 -  37912305 T
e Dinomys_branickii.DinBra_scaffold_10381                    96011 35 -    115145 T
e Cuniculus_paca.CunPac_flattened_line_7025                   1279 35 +     36344 T
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627 35 +     50838 T
e Cavia_tschudii.CavTsc_scaffold_23560                       60200 35 -     66877 T
e Cavia_porcellus.DS562891.1                               4997099 35 +  23407841 T
e Cavia_aperea.AVPZ01000300.1                              4993657 35 +  23392119 T
e Microgale_talazaci.MicTal_scaffold_6613                    41667 37 +    145209 T
e Echinops_telfairi.JH980293.1                            62851351 40 - 111700974 T
e Orycteropus_afer.OryAfe_flattened_line_171931              11056 37 -     14239 T
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408 29 -  20541912 T
e Pygathrix_nigripes_a.k141_215492                              5211 37 +     72585 T
e Pygathrix_nigripes_b.ctg100                                  150834 37 -   7812017 T
e Pygathrix_cinerea.k141_1153803                             24341 37 +     91421 T
e Callibella_humilis.k141_1233062                             7834 37 +     18648 T
e Perodicticus_potto.k141_1854441                            15139 37 -     24908 T
e Perodicticus_ibeanus.k141_1921260                          22769 37 +     31479 T
e Otolemur_garnettii.GL873799.1                             349529 37 +   1103335 T
e Otolemur_crassicaudatus.k141_649260                        36515 37 -     51505 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929 37 - 199412804 T
e Nycticebus_coucang.k141_8166032                             2064 37 +      2758 T
e Nycticebus_bengalensis.LG01                             93632675 37 + 196305487 T
e Loris_tardigradus.ctg83                                  5041044 37 -   6120653 T
e Loris_lydekkerianus.k141_2031736                            7384 37 +     19643 T
e Galagoides_demidoff.k141_561628                            16986 37 -     32986 T
e Galago_senegalensis.k141_991736                             4930 36 +     22493 T
e Galago_moholi.ctg3793                                     121389 36 -    137831 T
e Arctocebus_calabarensis.k141_1364444                       17350 37 -     45910 T
e Allochrocebus_solatus.k141_3554717                         15445 27 +     32033 T
e Allochrocebus_preussi.k141_1993939                         13769 28 -     21945 T
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503 37 -     31044 T
e Dasypus_novemcinctus.JH564415.1                          2107833 37 -   2246927 T
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495 37 -     19938 T
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743 37 +      5315 T
e Tupaia_tana.TupTan_flattened_line_394                       5859 37 -     70247 T
e Tupaia_chinensis.KB320699.1                              1831343 37 -   4065304 T
e Zalophus_californianus.ZalCal_flattened_line_17732         26391 37 -     86975 T
e Vulpes_lagopus.VulLag_flattened_line_12041                102738 37 -    112863 T
e Ursus_maritimus.KK499267.1                                179344 37 +   5085361 T
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224 37 -     97271 T
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227 37 -     18639 T
e Otocyon_megalotis.JAEUCK010005147.1                        37014 37 +    559221 T
e Odobenus_rosmarus.KB229312.1                             1449171 37 +   2017862 T
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975 37 +   9404916 T
e Neomonachus_schauinslandi.NINY01007730.1                11466383 37 -  31847680 T
e Mustela_putorius.JH418006.1                             14352449 37 +  14710649 T
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996 37 +     27589 T
e Mellivora_capensis.MelCap_flattened_line_19308             23509 37 -     74585 T
e Lycaon_pictus.CM007581.1                                41612373 37 +  59628241 T
e Leptonychotes_weddellii.KB714746.1                        810986 37 -   3914936 T
e Enhydra_lutris.KZ291758.1                               24913636 37 +  41312741 T
e Canis_lupus_orion.HG994398.1                            45104799 37 -  63665305 T
e Canis_lupus_familiaris.chr16                            41613218 37 +  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                          220083 37 +   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740 37 -     23171 T
e CanFam4.chr16                                           42503104 37 +  60362399 T
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672 37 -     15198 T
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834 37 +  29979442 T
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048 28 +      2695 T
e Xerus_inauris.XerIna_scaffold_2302                        171803 34 -    224448 T
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Varecia_variegata.k141_289850                              21738 36 -    147434 T
e Varecia_rubra.k141_787544                                  22831 36 -     30710 T
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988 37 -    105689 T
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579 37 +     59866 T
e Trachypithecus_phayrei.ctg124                             252848 37 -   6242583 T
e Trachypithecus_obscurus.k141_848057                         7609 37 -     13050 T
e Trachypithecus_melamera.k141_591572                          615 37 -      6147 T
e Trachypithecus_leucocephalus.k141_96450                     7187 37 +     22490 T
e Trachypithecus_laotum.k141_928651                          25744 37 -     63452 T
e Trachypithecus_hatinhensis.k141_31479                      27707 37 -     64340 T
e Trachypithecus_germaini.k141_57262                          6693 37 -     28527 T
e Trachypithecus_geei.k141_1001272                           25885 37 +     46913 T
e Trachypithecus_francoisi.k141_1453105                      25768 37 -     62838 T
e Trachypithecus_cristatus.k141_180416                       17543 37 +     25722 T
e Trachypithecus_crepusculus.k141_539312                     30906 37 -     78344 T
e Trachypithecus_auratus.k141_1189070                        18222 37 +     26378 T
e Tonatia_saurophila.TonSau_scaffold_294                    477420 37 -    610378 T
e Theropithecus_gelada.CM009954.1                           350535 23 - 186847797 T
e Tarsius_wallacei.k141_226975                                4794 37 +     20590 T
e Tarsius_lariang.k141_1780720                                4755 37 +      6850 T
e Tapirus_terrestris.TapTer_scaffold_755                    103056 37 -    539355 T
e Tapirus_indicus.TapInd_scaffold_7432                      189100 37 +    199430 T
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382 36 +      5583 T
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377 18 +     22964 T
e Symphalangus_syndactylus.tarseq_199                       388305 37 +   1523678 T
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274 33 +    196729 T
e Spermophilus_dauricus.KZ294078.1                         1866045 33 +   3870691 T
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078 38 -   1910179 T
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000 35 +     77746 T
e Semnopithecus_vetulus.k141_244474                          26080 37 -     48123 T
e Semnopithecus_schistaceus.k141_1432920                     23011 37 -     29113 T
e Semnopithecus_priam.k141_714795                            20331 37 -     42441 T
e Semnopithecus_johnii.k141_843753                           12673 37 -     45317 T
e Semnopithecus_hypoleucos.k141_1910531                      26177 37 +     58920 T
e Semnopithecus_entellus.k141_158471                         22658 37 +     27374 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762 37 +    313613 T
e Sapajus_macrocephalus.k141_796559                           5632 37 +     21866 T
e Sapajus_apella.ctg103                                     236042 37 +   5703754 T
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954 37 -      4301 T
e Saguinus_mystax.k141_8077960                                1588 37 +      5979 T
e Saguinus_midas.LG03                                       388907 37 - 209938924 T
e Saguinus_labiatus.k141_1571581                              1785 37 -      2099 T
e Saguinus_inustus.k141_2469308                               1640 37 +      5932 T
e Saguinus_imperator.k141_1898058                             1586 37 +      5971 T
e Saguinus_geoffroyi.k141_3779887                             1567 37 +      6077 T
e Saguinus_bicolor.k141_1429097                               1559 37 +     27962 T
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553 37 -    116970 T
e Rhinopithecus_strykeri.ctg102                             233778 36 -   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                    104119518 36 + 195417433 T
e Rhinopithecus_bieti.k119_221883                            26170 36 +     27361 T
e Rhinolophus_sinicus.LVEH01000134.1                       2911225 37 +   3329780 T
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575 37 +  38429054 T
e Pteropus_vampyrus.KN525825.1                             3535136 37 -   4952924 T
e Pteropus_alecto.KB030862.1                               5838570 37 -  28871421 T
e Pteronotus_parnellii.KE847780.1                            49602 37 -     66298 T
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969 36 +     35169 T
e Propithecus_tattersalli.k141_1127767                       92332 36 -     98465 T
e Propithecus_perrieri.k141_1496898                          32061 36 +     46564 T
e Propithecus_edwardsi.k141_635656                            5736 36 -     30655 T
e Propithecus_diadema.k141_153680                             2000 36 -     11706 T
e Propithecus_coronatus.k141_209299                           1403 36 -      7103 T
e Propithecus_coquerelli.NW_012148875.1                    1563767 36 -   2598838 T
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145 37 -     80239 T
e Presbytis_comata.k141_1230337                              24950 37 +     69807 T
e Plecturocebus_moloch.k141_1031110                          41783 37 +     89403 T
e Plecturocebus_miltoni.k141_349282                          40315 37 -     90634 T
e Plecturocebus_hoffmannsi.k141_3303950                      12399 37 -     67232 T
e Plecturocebus_grovesi.k141_2013005                          5463 37 -     60166 T
e Plecturocebus_dubius.k141_1058799                          40420 37 +     87928 T
e Plecturocebus_cupreus.k141_2351393                          5466 37 -     39403 T
e Plecturocebus_cinerascens.k141_1164729                     40767 37 -     88961 T
e Plecturocebus_caligatus.k141_1382851                       40374 37 -     87950 T
e Plecturocebus_brunneus.k141_862875                           970 37 -      9282 T
e Plecturocebus_bernhardi.k141_2549090                        5885 37 +     39866 T
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454 37 +     51125 T
e Pithecia_pithecia.tarseq_165                              554439 27 -   4542175 T
e Pithecia_pissinattii.k141_878371                           29470 37 +     51148 T
e Pithecia_mittermeieri.k141_1280039                         29707 37 +     63561 T
e Pithecia_hirsuta.k141_640380                               29431 37 +     58159 T
e Pithecia_chrysocephala.k141_785207                          3692 27 -     25401 T
e Pithecia_albicans.k141_1239476                             62596 37 +    207309 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564 46 +     22231 T
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453 37 +      5735 T
e Piliocolobus_kirkii.k141_579682                            44775 37 +     45295 T
e Piliocolobus_gordonorum.k141_905727                        62176 37 -     63152 T
e Piliocolobus_badius.k141_2495623                            6468 37 +      7560 T
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434 36 +  18517816 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589 37 +     78924 T
e Papio_ursinus.k141_2278143                                 19614 23 -     23640 T
e Papio_papio.k141_799093                                    12804 23 +     16796 T
e Papio_kindae.k141_2214839                                  19668 23 -     27687 T
e Papio_hamadryas.Contig39                                  288052 23 -  20919399 T
e Papio_cynocephalus.k141_1507553                             7013 23 +     21308 T
e Papio_anubis.CM001495.2                                   240549 23 - 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975 37 +   8748460 T
e Panthera_pardus.KV860321.1                              18459255 37 -  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                   21929 37 -    230217 T
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789 37 +    107918 T
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957 39 -    140218 T
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447 37 -     54323 T
e Nomascus_siki_b.tarseq_93                            8411333 37 -  22158432 T
e Nomascus_gabriellae.k141_57920                             13049 37 +     22201 T
e Nomascus_concolor.k141_735679                               7164 37 -     16345 T
e Nomascus_annamensis.k141_1771965                           51069 37 -    132029 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125173 31 -    149072 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317 37 +     34575 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264 36 +    130748 T
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625 45 +   4330536 T
e Myotis_davidii.KB100139.1                                4384803 45 +   6019432 T
e Myotis_brandtii.KE162005.1                               9790404 45 +  10118263 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388 45 +     47283 T
e Mungos_mungo.MunMun_flattened_line_18455                   15863 33 -     63510 T
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536 37 +    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mirza_zaza.k141_766280                                     50085 18 -     62432 T
e Miopithecus_ogouensis.k141_1534655                         19736 37 -     27822 T
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357 35 +    200668 T
e Microcebus_murinus.CM007674.1                           74982290 36 +  93316391 T
e Mico_schneideri.k141_1877700                                     16341 37 -     26561 T
e Mico_humeralifer.k141_1180625                               8390 37 -     12984 T
e Mico_argentatus.k141_582562                                 7606 37 +     17804 T
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130 34 +    207569 T
e Marmota_marmota.CZRN01000018.1                           7498675 33 +  40650429 T
e Manis_pentadactyla.KN006162.1                             218512 37 +    317179 T
e Manis_javanica.JSZB01003497.1                             671221 37 -    737560 T
e Mandrillus_sphinx.Contig270                               354541 23 -    752769 T
e Mandrillus_leucophaeus.scaffold280                        319709 23 +  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942 37 -    270270 T
e Macaca_tonkeana.k141_339739                                  209 17 +     17132 T
e Macaca_thibetana.k99_41370                                 19612 23 +     21031 T
e Macaca_silenus.Contig273                                  268431 37 +    668171 T
e Macaca_siberu.k141_2185972                                 42498 70 +     59329 T
e Macaca_radiata.k141_3557992                                22677 37 +     24253 T
e Macaca_nigra.k141_2818840                                  46022 37 -     62418 T
e Macaca_nemestrina.KQ007038.1                              396858 37 +  25927173 T
e Macaca_mulatta.NC_041758.1                                412635 37 - 187317192 T
e Macaca_maura.k141_1103459                                  43467 70 +     51645 T
e Macaca_leonina.k141_321385                                 33696 37 -     50087 T
e Macaca_fuscata.k119_546792                                 22506 37 +     30527 T
e Macaca_fascicularis.k141_1397292                           19657 27 -     24934 T
e Macaca_cyclopis.k119_263443                                22554 23 +     30207 T
e Macaca_assamensis.Contig5                                 370299 37 -  60120075 T
e Macaca_arctoides.k141_1757516                              42638 23 -     61512 T
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321 23 -   1826925 T
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679 36 +     16388 T
e Lepilemur_ruficaudatus.k141_330196                          6685 36 +     24756 T
e Lepilemur_dorsalis.k141_387009                              6675 36 +     31569 T
e Lepilemur_ankaranensis.k141_567626                          6678 36 +     29618 T
e Leontopithecus_rosalia.k141_349454                          9242 37 -     12945 T
e Leontopithecus_chrysomelas.k141_1327670                     7861 37 -     11567 T
e Leontocebus_nigricollis.k141_3905062                        1228 37 -      5717 T
e Leontocebus_illigeri.k141_2951200                           1597 37 +      5940 T
e Leontocebus_fuscicollis.k141_2994775                        1646 37 -     13097 T
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517 45 -     65777 T
e Lagothrix_lagothricha.k141_246028                          40966 37 +    110728 T
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885 23 +   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Indri_indri.k141_4600452                                    1394 44 -      1527 T
e Ictidomys_tridecemlineatus.JH393364.1                     384476 33 +   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837 37 +  11177569 T
e Hylobates_pileatus_b.LG02                                       2049482 37 + 191637585 T
e Hylobates_klossii.k141_738755                              10363 37 +     55766 T
e Hylobates_agilis.k141_1155965                               3180 37 +     12352 T
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590 37 +     83186 T
e Hoolock_leuconedys.ctg274                                    140145 37 -    630532 T
e Hipposideros_galeritus.HipGal_scaffold_23202               47193 37 +     49977 T
e Hipposideros_armiger.JXIK01000431.1                      1547877 37 -   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109 33 -    327341 T
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737 37 +     18121 T
e Felis_nigripes.FelNig_flattened_line_31944                 25108 37 -     30238 T
e Felis_catus_fca126.CM031415.1                          185113760 37 - 205367284 T
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Erythrocebus_patas.Contig38                               260217 37 +  21539334 T
e Equus_przewalskii.KK951119.1                              409840 36 -    498745 T
e Equus_caballus.CM000403.2                               21373054 36 +  39960074 T
e Equus_asinus.JREZ01000139.1                              3039120 36 -   4378816 T
e Eptesicus_fuscus.JH977646.1                             12576040 45 +  14770903 T
e Ellobius_talpinus.LOJH01026522.1                           10200 34 +     18970 T
e Ellobius_lutescens.LOEQ01008920.1                          28236 34 +    110024 T
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976 37 +     19438 T
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924 37 -    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139 37 -   1390856 T
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271 25 +  12879189 T
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549 38 -   1526836 T
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604 37 +     87169 T
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006 37 -     83289 T
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427 37 -      8242 T
e Condylura_cristata.JH655891.1                           35804984 37 +  53390261 T
e Colobus_polykomos.k141_1559707                              6362 37 -      6605 T
e Colobus_guereza.LG01                                      376350 37 - 200372422 T
e Colobus_angolensis.KN981557.1                             406473 37 -   2368649 T
e Chlorocebus_sabaeus.CM001947.1                            302019 37 - 135778131 T
e Chlorocebus_pygerythrus.k141_3063162                        7239 37 -     44032 T
e Chlorocebus_aethiops.ctg25                                340694 37 +  18827391 T
e Chiropotes_sagulatus.k141_1113111                           5818 37 +     34062 T
e Chiropotes_israelita.k141_313004                           40246 37 -    112038 T
e Chiropotes_albinasus.k141_1946120                           1561 37 +      5346 T
e Cheracebus_torquatus.k141_890198                           17175 37 +     39636 T
e Cheracebus_regulus.k141_471822                             17391 37 +    216457 T
e Cheracebus_lugens.k141_1179667                             17127 37 -     40346 T
e Cheracebus_lucifer.k141_2312002                             6714 37 -     32913 T
e Cheirogaleus_medius.k141_759766                             2852 36 -     15404 T
e Cheirogaleus_major.k141_666340                             28322 36 -     33796 T
e Cercopithecus_roloway.k141_3012935                         19797 37 +     36323 T
e Cercopithecus_pogonias.k141_6079                           22872 37 +     70610 T
e Cercopithecus_petaurista.k141_42573                         1353 37 +      8499 T
e Cercopithecus_nictitans.k141_2995370                       25200 37 -     32606 T
e Cercopithecus_neglectus.k141_858615                        29380 37 -     45857 T
e Cercopithecus_mona.ctg39                                  267919 37 +  21565898 T
e Cercopithecus_albogularis.ctg5                                  362211 37 -  39242232 T
e Cercopithecus_lowei.k141_2101310                            9612 37 -     25376 T
e Cercopithecus_hamlyni.k141_566925                          24903 37 -     34525 T
e Cercopithecus_diana.k141_132293                             9181 37 -     17524 T
e Cercopithecus_cephus.k141_4183004                           4991 37 +     20796 T
e Cercopithecus_ascanius.k141_3120866                        25022 30 -     40656 T
e Cercocebus_torquatus.k141_2159127                          41924 23 -    148725 T
e Cercocebus_lunulatus.k141_2779015                          41941 23 -     44860 T
e Cercocebus_chrysogaster.k141_1522556                       42108 23 +     47900 T
e Cercocebus_atys.KQ010504.1                                138368 23 -   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680 37 +     27315 T
e Cephalopachus_bancanus.k141_72622                           1235 37 -      1636 T
e Cebus_unicolor.k141_1654760                                64802 37 -     89041 T
e Cebus_olivaceus.k141_1404781                                5707 37 -     34880 T
e Cebus_albifrons.Contig27                                  368818 37 -  26074798 T
e Cebuella_pygmaea.k141_145798                               40615 37 +     53515 T
e Cebuella_niveiventris.k141_592277                           2729 37 -     12580 T
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094 36 -     39886 T
e Carlito_syrichta.NW_007259797.1                           268063 37 +    496798 T
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443 37 -     18408 T
e Callithrix_jacchus.pat_scaffold_3                      165451150 37 + 189096842 T
e Callithrix_geoffroyi.k119_473390                           16195 37 +     17162 T
e Callimico_goeldii.k141_1609886                              7497 29 -     13885 T
e Cacajao_melanocephalus.k141_619699                         18339 37 +    119600 T
e Cacajao_hosomi.k141_81245                                  18426 37 +     95584 T
e Cacajao_calvus.k141_89051                                  40900 37 -     91139 T
e Cacajao_ayresi.k141_96119                                   5606 37 +     28062 T
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889 36 -     19611 T
e Avahi_laniger.k141_2756659                                  3888 36 +     11645 T
e Ateles_paniscus.k141_866194                                20710 37 -     33135 T
e Ateles_marginatus.k141_970259                              46651 37 -     71267 T
e Ateles_geoffroyi_a.k141_1283730                              31280 37 +     44353 T
e Ateles_chamek.k141_615173                                   3727 37 -     28759 T
e Ateles_belzebuth.k141_1572163                               8590 37 +     48076 T
e Ateles_geoffroyi_b.tarseq_1536                               272423 37 +  21539123 T
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732 41 -     32367 T
e Aotus_vociferans.k141_944972                                6977 37 +      8415 T
e Aotus_trivirgatus.k141_192090                              21841 37 -     23494 T
e Aotus_nancymaae.KZ198451.1                                670199 37 +   5030052 T
e Aotus_griseimembra.k141_982342                             42186 37 +     43593 T
e Aotus_azarae.k141_118258                                   48439 37 -     65372 T
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387 37 -    412891 T
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624 37 +     42133 T
e Alouatta_puruensis.k141_251022                              6485 37 +     30854 T
e Alouatta_palliata.k141_638677                              44360 37 +     70886 T
e Alouatta_nigerrima.k141_376068                             38662 37 +     45454 T
e Alouatta_macconnelli.k141_361275                           21679 37 -     24835 T
e Alouatta_juara.k141_1687208                                40033 37 -     64179 T
e Alouatta_discolor.k141_2561099                             41595 37 +     55831 T
e Alouatta_caraya.k141_1109140                               42145 37 -     78289 T
e Alouatta_belzebul.k141_1011583                             69916 37 -     84148 T
e Allochrocebus_lhoesti.k141_441277                          41129 37 +     44087 T
e Allenopithecus_nigroviridis.k141_3755588                   45208 37 +     53615 T
e Allactaga_bullata.AllBul_scaffold_20030                    15727 23 -     61208 T
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313 37 +   1699592 T

a score=0.000000
s hg38.chrUn_KI270755v1                                       2036 46 +     36723 caccac-catagaattagatggcttct-gcagatacggctaaatct---tc
s Gorilla_beringei.k141_3358147                               2398 46 -      8343 catctt-catagaattaggtggcttct-gcagatacggctaagtct---tc
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 67989 45 +  33314783 caccac-catagAATTAGGTGGCTTCT-GCAGATA-Ggctaagtct---tc
i Gorilla_gorilla.LT578336.1                             I 158 C 0
s Pan_troglodytes.CM009242.2                               1469775 49 - 189151597 caccac-cataggattaggtggcttct-gcagatatggctaagtcttctcc
i Pan_troglodytes.CM009242.2                             I 3 C 0
s Pongo_abelii.CM009266.2                                   174904 46 - 189387572 cacctt-catAGGATTAGGTGGCTTGT-GCAGATATGGCTAAGTCT---TC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189902 46 -   9816681 CACCAC-CATAGAATTAGGTGGCTTCT-ACAGATACGGCTAAGTCT---TC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991 35 -     33621 T
e Petromus_typicus.PetTyp_scaffold_17301                     29661 35 -     56120 T
e Perognathus_longimembris.PerPac_flattened_line_28053       37455 83 +     38305 T
e Octodon_degus.JH651603.1                                11044981 35 -  11899542 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949 35 +    143317 T
e Heterocephalus_glaber.JH602082.1                         1924707 35 -  22651954 T
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606 34 +     14636 T
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201 82 -     10735 T
e Dipodomys_ordii.KN672350.1                              18948254 82 -  37912305 T
e Dinomys_branickii.DinBra_scaffold_10381                    96011 35 -    115145 T
e Cuniculus_paca.CunPac_flattened_line_7025                   1279 35 +     36344 T
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627 35 +     50838 T
e Cavia_tschudii.CavTsc_scaffold_23560                       60200 35 -     66877 T
e Cavia_porcellus.DS562891.1                               4997099 35 +  23407841 T
e Cavia_aperea.AVPZ01000300.1                              4993657 35 +  23392119 T
e Microgale_talazaci.MicTal_scaffold_6613                    41667 37 +    145209 T
e Echinops_telfairi.JH980293.1                            62851351 40 - 111700974 T
e Orycteropus_afer.OryAfe_flattened_line_171931              11056 37 -     14239 T
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408 29 -  20541912 T
e Pygathrix_nigripes_a.k141_215492                              5211 37 +     72585 T
e Pygathrix_nigripes_b.ctg100                                  150834 37 -   7812017 T
e Pygathrix_cinerea.k141_1153803                             24341 37 +     91421 T
e Callibella_humilis.k141_1233062                             7834 37 +     18648 T
e Perodicticus_potto.k141_1854441                            15139 37 -     24908 T
e Perodicticus_ibeanus.k141_1921260                          22769 37 +     31479 T
e Otolemur_garnettii.GL873799.1                             349529 37 +   1103335 T
e Otolemur_crassicaudatus.k141_649260                        36515 37 -     51505 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929 37 - 199412804 T
e Nycticebus_coucang.k141_8166032                             2064 37 +      2758 T
e Nycticebus_bengalensis.LG01                             93632675 37 + 196305487 T
e Loris_tardigradus.ctg83                                  5041044 37 -   6120653 T
e Loris_lydekkerianus.k141_2031736                            7384 37 +     19643 T
e Galagoides_demidoff.k141_561628                            16986 37 -     32986 T
e Galago_senegalensis.k141_991736                             4930 36 +     22493 T
e Galago_moholi.ctg3793                                     121389 36 -    137831 T
e Arctocebus_calabarensis.k141_1364444                       17350 37 -     45910 T
e Allochrocebus_solatus.k141_3554717                         15445 27 +     32033 T
e Allochrocebus_preussi.k141_1993939                         13769 28 -     21945 T
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503 37 -     31044 T
e Dasypus_novemcinctus.JH564415.1                          2107833 37 -   2246927 T
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495 37 -     19938 T
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743 37 +      5315 T
e Tupaia_tana.TupTan_flattened_line_394                       5859 37 -     70247 T
e Tupaia_chinensis.KB320699.1                              1831343 37 -   4065304 T
e Zalophus_californianus.ZalCal_flattened_line_17732         26391 37 -     86975 T
e Vulpes_lagopus.VulLag_flattened_line_12041                102738 37 -    112863 T
e Ursus_maritimus.KK499267.1                                179344 37 +   5085361 T
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224 37 -     97271 T
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227 37 -     18639 T
e Otocyon_megalotis.JAEUCK010005147.1                        37014 37 +    559221 T
e Odobenus_rosmarus.KB229312.1                             1449171 37 +   2017862 T
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975 37 +   9404916 T
e Neomonachus_schauinslandi.NINY01007730.1                11466383 37 -  31847680 T
e Mustela_putorius.JH418006.1                             14352449 37 +  14710649 T
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996 37 +     27589 T
e Mellivora_capensis.MelCap_flattened_line_19308             23509 37 -     74585 T
e Lycaon_pictus.CM007581.1                                41612373 37 +  59628241 T
e Leptonychotes_weddellii.KB714746.1                        810986 37 -   3914936 T
e Enhydra_lutris.KZ291758.1                               24913636 37 +  41312741 T
e Canis_lupus_orion.HG994398.1                            45104799 37 -  63665305 T
e Canis_lupus_familiaris.chr16                            41613218 37 +  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                          220083 37 +   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740 37 -     23171 T
e CanFam4.chr16                                           42503104 37 +  60362399 T
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672 37 -     15198 T
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834 37 +  29979442 T
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048 28 +      2695 T
e Xerus_inauris.XerIna_scaffold_2302                        171803 34 -    224448 T
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Varecia_variegata.k141_289850                              21738 36 -    147434 T
e Varecia_rubra.k141_787544                                  22831 36 -     30710 T
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988 37 -    105689 T
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579 37 +     59866 T
e Trachypithecus_phayrei.ctg124                             252848 37 -   6242583 T
e Trachypithecus_obscurus.k141_848057                         7609 37 -     13050 T
e Trachypithecus_melamera.k141_591572                          615 37 -      6147 T
e Trachypithecus_leucocephalus.k141_96450                     7187 37 +     22490 T
e Trachypithecus_laotum.k141_928651                          25744 37 -     63452 T
e Trachypithecus_hatinhensis.k141_31479                      27707 37 -     64340 T
e Trachypithecus_germaini.k141_57262                          6693 37 -     28527 T
e Trachypithecus_geei.k141_1001272                           25885 37 +     46913 T
e Trachypithecus_francoisi.k141_1453105                      25768 37 -     62838 T
e Trachypithecus_cristatus.k141_180416                       17543 37 +     25722 T
e Trachypithecus_crepusculus.k141_539312                     30906 37 -     78344 T
e Trachypithecus_auratus.k141_1189070                        18222 37 +     26378 T
e Tonatia_saurophila.TonSau_scaffold_294                    477420 37 -    610378 T
e Theropithecus_gelada.CM009954.1                           350535 23 - 186847797 T
e Tarsius_wallacei.k141_226975                                4794 37 +     20590 T
e Tarsius_lariang.k141_1780720                                4755 37 +      6850 T
e Tapirus_terrestris.TapTer_scaffold_755                    103056 37 -    539355 T
e Tapirus_indicus.TapInd_scaffold_7432                      189100 37 +    199430 T
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382 36 +      5583 T
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377 18 +     22964 T
e Symphalangus_syndactylus.tarseq_199                       388305 37 +   1523678 T
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274 33 +    196729 T
e Spermophilus_dauricus.KZ294078.1                         1866045 33 +   3870691 T
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078 38 -   1910179 T
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000 35 +     77746 T
e Semnopithecus_vetulus.k141_244474                          26080 37 -     48123 T
e Semnopithecus_schistaceus.k141_1432920                     23011 37 -     29113 T
e Semnopithecus_priam.k141_714795                            20331 37 -     42441 T
e Semnopithecus_johnii.k141_843753                           12673 37 -     45317 T
e Semnopithecus_hypoleucos.k141_1910531                      26177 37 +     58920 T
e Semnopithecus_entellus.k141_158471                         22658 37 +     27374 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762 37 +    313613 T
e Sapajus_macrocephalus.k141_796559                           5632 37 +     21866 T
e Sapajus_apella.ctg103                                     236042 37 +   5703754 T
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954 37 -      4301 T
e Saguinus_mystax.k141_8077960                                1588 37 +      5979 T
e Saguinus_midas.LG03                                       388907 37 - 209938924 T
e Saguinus_labiatus.k141_1571581                              1785 37 -      2099 T
e Saguinus_inustus.k141_2469308                               1640 37 +      5932 T
e Saguinus_imperator.k141_1898058                             1586 37 +      5971 T
e Saguinus_geoffroyi.k141_3779887                             1567 37 +      6077 T
e Saguinus_bicolor.k141_1429097                               1559 37 +     27962 T
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553 37 -    116970 T
e Rhinopithecus_strykeri.ctg102                             233778 36 -   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                    104119518 36 + 195417433 T
e Rhinopithecus_bieti.k119_221883                            26170 36 +     27361 T
e Rhinolophus_sinicus.LVEH01000134.1                       2911225 37 +   3329780 T
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575 37 +  38429054 T
e Pteropus_vampyrus.KN525825.1                             3535136 37 -   4952924 T
e Pteropus_alecto.KB030862.1                               5838570 37 -  28871421 T
e Pteronotus_parnellii.KE847780.1                            49602 37 -     66298 T
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969 36 +     35169 T
e Propithecus_tattersalli.k141_1127767                       92332 36 -     98465 T
e Propithecus_perrieri.k141_1496898                          32061 36 +     46564 T
e Propithecus_edwardsi.k141_635656                            5736 36 -     30655 T
e Propithecus_diadema.k141_153680                             2000 36 -     11706 T
e Propithecus_coronatus.k141_209299                           1403 36 -      7103 T
e Propithecus_coquerelli.NW_012148875.1                    1563767 36 -   2598838 T
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145 37 -     80239 T
e Presbytis_comata.k141_1230337                              24950 37 +     69807 T
e Plecturocebus_moloch.k141_1031110                          41783 37 +     89403 T
e Plecturocebus_miltoni.k141_349282                          40315 37 -     90634 T
e Plecturocebus_hoffmannsi.k141_3303950                      12399 37 -     67232 T
e Plecturocebus_grovesi.k141_2013005                          5463 37 -     60166 T
e Plecturocebus_dubius.k141_1058799                          40420 37 +     87928 T
e Plecturocebus_cupreus.k141_2351393                          5466 37 -     39403 T
e Plecturocebus_cinerascens.k141_1164729                     40767 37 -     88961 T
e Plecturocebus_caligatus.k141_1382851                       40374 37 -     87950 T
e Plecturocebus_brunneus.k141_862875                           970 37 -      9282 T
e Plecturocebus_bernhardi.k141_2549090                        5885 37 +     39866 T
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454 37 +     51125 T
e Pithecia_pithecia.tarseq_165                              554439 27 -   4542175 T
e Pithecia_pissinattii.k141_878371                           29470 37 +     51148 T
e Pithecia_mittermeieri.k141_1280039                         29707 37 +     63561 T
e Pithecia_hirsuta.k141_640380                               29431 37 +     58159 T
e Pithecia_chrysocephala.k141_785207                          3692 27 -     25401 T
e Pithecia_albicans.k141_1239476                             62596 37 +    207309 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564 46 +     22231 T
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453 37 +      5735 T
e Piliocolobus_kirkii.k141_579682                            44775 37 +     45295 T
e Piliocolobus_gordonorum.k141_905727                        62176 37 -     63152 T
e Piliocolobus_badius.k141_2495623                            6468 37 +      7560 T
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434 36 +  18517816 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589 37 +     78924 T
e Papio_ursinus.k141_2278143                                 19614 23 -     23640 T
e Papio_papio.k141_799093                                    12804 23 +     16796 T
e Papio_kindae.k141_2214839                                  19668 23 -     27687 T
e Papio_hamadryas.Contig39                                  288052 23 -  20919399 T
e Papio_cynocephalus.k141_1507553                             7013 23 +     21308 T
e Papio_anubis.CM001495.2                                   240549 23 - 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975 37 +   8748460 T
e Panthera_pardus.KV860321.1                              18459255 37 -  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                   21929 37 -    230217 T
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789 37 +    107918 T
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957 39 -    140218 T
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447 37 -     54323 T
e Nomascus_siki_b.tarseq_93                            8411333 37 -  22158432 T
e Nomascus_gabriellae.k141_57920                             13049 37 +     22201 T
e Nomascus_concolor.k141_735679                               7164 37 -     16345 T
e Nomascus_annamensis.k141_1771965                           51069 37 -    132029 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125173 31 -    149072 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317 37 +     34575 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264 36 +    130748 T
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625 45 +   4330536 T
e Myotis_davidii.KB100139.1                                4384803 45 +   6019432 T
e Myotis_brandtii.KE162005.1                               9790404 45 +  10118263 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388 45 +     47283 T
e Mungos_mungo.MunMun_flattened_line_18455                   15863 33 -     63510 T
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536 37 +    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50085 18 -     62432 T
e Miopithecus_ogouensis.k141_1534655                         19736 37 -     27822 T
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357 35 +    200668 T
e Microcebus_murinus.CM007674.1                           74982290 36 +  93316391 T
e Mico_schneideri.k141_1877700                                     16341 37 -     26561 T
e Mico_humeralifer.k141_1180625                               8390 37 -     12984 T
e Mico_argentatus.k141_582562                                 7606 37 +     17804 T
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130 34 +    207569 T
e Marmota_marmota.CZRN01000018.1                           7498675 33 +  40650429 T
e Manis_pentadactyla.KN006162.1                             218512 37 +    317179 T
e Manis_javanica.JSZB01003497.1                             671221 37 -    737560 T
e Mandrillus_sphinx.Contig270                               354541 23 -    752769 T
e Mandrillus_leucophaeus.scaffold280                        319709 23 +  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942 37 -    270270 T
e Macaca_tonkeana.k141_339739                                  209 17 +     17132 T
e Macaca_thibetana.k99_41370                                 19612 23 +     21031 T
e Macaca_silenus.Contig273                                  268431 37 +    668171 T
e Macaca_siberu.k141_2185972                                 42498 70 +     59329 T
e Macaca_radiata.k141_3557992                                22677 37 +     24253 T
e Macaca_nigra.k141_2818840                                  46022 37 -     62418 T
e Macaca_nemestrina.KQ007038.1                              396858 37 +  25927173 T
e Macaca_mulatta.NC_041758.1                                412635 37 - 187317192 T
e Macaca_maura.k141_1103459                                  43467 70 +     51645 T
e Macaca_leonina.k141_321385                                 33696 37 -     50087 T
e Macaca_fuscata.k119_546792                                 22506 37 +     30527 T
e Macaca_fascicularis.k141_1397292                           19657 27 -     24934 T
e Macaca_cyclopis.k119_263443                                22554 23 +     30207 T
e Macaca_assamensis.Contig5                                 370299 37 -  60120075 T
e Macaca_arctoides.k141_1757516                              42638 23 -     61512 T
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321 23 -   1826925 T
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679 36 +     16388 T
e Lepilemur_ruficaudatus.k141_330196                          6685 36 +     24756 T
e Lepilemur_dorsalis.k141_387009                              6675 36 +     31569 T
e Lepilemur_ankaranensis.k141_567626                          6678 36 +     29618 T
e Leontopithecus_rosalia.k141_349454                          9242 37 -     12945 T
e Leontopithecus_chrysomelas.k141_1327670                     7861 37 -     11567 T
e Leontocebus_nigricollis.k141_3905062                        1228 37 -      5717 T
e Leontocebus_illigeri.k141_2951200                           1597 37 +      5940 T
e Leontocebus_fuscicollis.k141_2994775                        1646 37 -     13097 T
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517 45 -     65777 T
e Lagothrix_lagothricha.k141_246028                          40966 37 +    110728 T
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885 23 +   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Indri_indri.k141_4600452                                    1394 44 -      1527 T
e Ictidomys_tridecemlineatus.JH393364.1                     384476 33 +   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837 37 +  11177569 T
e Hylobates_pileatus_b.LG02                                       2049482 37 + 191637585 T
e Hylobates_klossii.k141_738755                              10363 37 +     55766 T
e Hylobates_agilis.k141_1155965                               3180 37 +     12352 T
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590 37 +     83186 T
e Hoolock_leuconedys.ctg274                                    140145 37 -    630532 T
e Hipposideros_galeritus.HipGal_scaffold_23202               47193 37 +     49977 T
e Hipposideros_armiger.JXIK01000431.1                      1547877 37 -   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109 33 -    327341 T
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737 37 +     18121 T
e Felis_nigripes.FelNig_flattened_line_31944                 25108 37 -     30238 T
e Felis_catus_fca126.CM031415.1                          185113760 37 - 205367284 T
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Erythrocebus_patas.Contig38                               260217 37 +  21539334 T
e Equus_przewalskii.KK951119.1                              409840 36 -    498745 T
e Equus_caballus.CM000403.2                               21373054 36 +  39960074 T
e Equus_asinus.JREZ01000139.1                              3039120 36 -   4378816 T
e Eptesicus_fuscus.JH977646.1                             12576040 45 +  14770903 T
e Ellobius_talpinus.LOJH01026522.1                           10200 34 +     18970 T
e Ellobius_lutescens.LOEQ01008920.1                          28236 34 +    110024 T
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976 37 +     19438 T
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924 37 -    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139 37 -   1390856 T
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271 25 +  12879189 T
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549 38 -   1526836 T
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604 37 +     87169 T
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006 37 -     83289 T
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427 37 -      8242 T
e Condylura_cristata.JH655891.1                           35804984 37 +  53390261 T
e Colobus_polykomos.k141_1559707                              6362 37 -      6605 T
e Colobus_guereza.LG01                                      376350 37 - 200372422 T
e Colobus_angolensis.KN981557.1                             406473 37 -   2368649 T
e Chlorocebus_sabaeus.CM001947.1                            302019 37 - 135778131 T
e Chlorocebus_pygerythrus.k141_3063162                        7239 37 -     44032 T
e Chlorocebus_aethiops.ctg25                                340694 37 +  18827391 T
e Chiropotes_sagulatus.k141_1113111                           5818 37 +     34062 T
e Chiropotes_israelita.k141_313004                           40246 37 -    112038 T
e Chiropotes_albinasus.k141_1946120                           1561 37 +      5346 T
e Cheracebus_torquatus.k141_890198                           17175 37 +     39636 T
e Cheracebus_regulus.k141_471822                             17391 37 +    216457 T
e Cheracebus_lugens.k141_1179667                             17127 37 -     40346 T
e Cheracebus_lucifer.k141_2312002                             6714 37 -     32913 T
e Cheirogaleus_medius.k141_759766                             2852 36 -     15404 T
e Cheirogaleus_major.k141_666340                             28322 36 -     33796 T
e Cercopithecus_roloway.k141_3012935                         19797 37 +     36323 T
e Cercopithecus_pogonias.k141_6079                           22872 37 +     70610 T
e Cercopithecus_petaurista.k141_42573                         1353 37 +      8499 T
e Cercopithecus_nictitans.k141_2995370                       25200 37 -     32606 T
e Cercopithecus_neglectus.k141_858615                        29380 37 -     45857 T
e Cercopithecus_mona.ctg39                                  267919 37 +  21565898 T
e Cercopithecus_albogularis.ctg5                                  362211 37 -  39242232 T
e Cercopithecus_lowei.k141_2101310                            9612 37 -     25376 T
e Cercopithecus_hamlyni.k141_566925                          24903 37 -     34525 T
e Cercopithecus_diana.k141_132293                             9181 37 -     17524 T
e Cercopithecus_cephus.k141_4183004                           4991 37 +     20796 T
e Cercopithecus_ascanius.k141_3120866                        25022 30 -     40656 T
e Cercocebus_torquatus.k141_2159127                          41924 23 -    148725 T
e Cercocebus_lunulatus.k141_2779015                          41941 23 -     44860 T
e Cercocebus_chrysogaster.k141_1522556                       42108 23 +     47900 T
e Cercocebus_atys.KQ010504.1                                138368 23 -   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680 37 +     27315 T
e Cephalopachus_bancanus.k141_72622                           1235 37 -      1636 T
e Cebus_unicolor.k141_1654760                                64802 37 -     89041 T
e Cebus_olivaceus.k141_1404781                                5707 37 -     34880 T
e Cebus_albifrons.Contig27                                  368818 37 -  26074798 T
e Cebuella_pygmaea.k141_145798                               40615 37 +     53515 T
e Cebuella_niveiventris.k141_592277                           2729 37 -     12580 T
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094 36 -     39886 T
e Carlito_syrichta.NW_007259797.1                           268063 37 +    496798 T
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443 37 -     18408 T
e Callithrix_jacchus.pat_scaffold_3                      165451150 37 + 189096842 T
e Callithrix_geoffroyi.k119_473390                           16195 37 +     17162 T
e Callimico_goeldii.k141_1609886                              7497 29 -     13885 T
e Cacajao_melanocephalus.k141_619699                         18339 37 +    119600 T
e Cacajao_hosomi.k141_81245                                  18426 37 +     95584 T
e Cacajao_calvus.k141_89051                                  40900 37 -     91139 T
e Cacajao_ayresi.k141_96119                                   5606 37 +     28062 T
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889 36 -     19611 T
e Avahi_laniger.k141_2756659                                  3888 36 +     11645 T
e Ateles_paniscus.k141_866194                                20710 37 -     33135 T
e Ateles_marginatus.k141_970259                              46651 37 -     71267 T
e Ateles_geoffroyi_a.k141_1283730                              31280 37 +     44353 T
e Ateles_chamek.k141_615173                                   3727 37 -     28759 T
e Ateles_belzebuth.k141_1572163                               8590 37 +     48076 T
e Ateles_geoffroyi_b.tarseq_1536                               272423 37 +  21539123 T
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732 41 -     32367 T
e Aotus_vociferans.k141_944972                                6977 37 +      8415 T
e Aotus_trivirgatus.k141_192090                              21841 37 -     23494 T
e Aotus_nancymaae.KZ198451.1                                670199 37 +   5030052 T
e Aotus_griseimembra.k141_982342                             42186 37 +     43593 T
e Aotus_azarae.k141_118258                                   48439 37 -     65372 T
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387 37 -    412891 T
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624 37 +     42133 T
e Alouatta_puruensis.k141_251022                              6485 37 +     30854 T
e Alouatta_palliata.k141_638677                              44360 37 +     70886 T
e Alouatta_nigerrima.k141_376068                             38662 37 +     45454 T
e Alouatta_macconnelli.k141_361275                           21679 37 -     24835 T
e Alouatta_juara.k141_1687208                                40033 37 -     64179 T
e Alouatta_discolor.k141_2561099                             41595 37 +     55831 T
e Alouatta_caraya.k141_1109140                               42145 37 -     78289 T
e Alouatta_belzebul.k141_1011583                             69916 37 -     84148 T
e Allochrocebus_lhoesti.k141_441277                          41129 37 +     44087 T
e Allenopithecus_nigroviridis.k141_3755588                   45208 37 +     53615 T
e Allactaga_bullata.AllBul_scaffold_20030                    15727 23 -     61208 T
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313 37 +   1699592 T

a score=0.000000
s hg38.chrUn_KI270755v1                                       2082 3 +     36723 tcc
s Gorilla_beringei.k141_3358147                               2444 3 -      8343 tcc
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 68034 3 +  33314783 tcc
i Gorilla_gorilla.LT578336.1                             C 0 C 0
s Pan_troglodytes.KZ622849.1                                 30400 3 -    110857 tcc
i Pan_troglodytes.KZ622849.1                             I 87 I 98
s Pongo_abelii.CM009266.2                                   174950 3 - 189387572 TCC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189948 1 -   9816681 T--
i Pongo_pygmaeus.ctg66                                   C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991 35 -     33621 T
e Petromus_typicus.PetTyp_scaffold_17301                     29661 35 -     56120 T
e Perognathus_longimembris.PerPac_flattened_line_28053       37455 83 +     38305 T
e Octodon_degus.JH651603.1                                11044981 35 -  11899542 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949 35 +    143317 T
e Heterocephalus_glaber.JH602082.1                         1924707 35 -  22651954 T
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606 34 +     14636 T
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201 82 -     10735 T
e Dipodomys_ordii.KN672350.1                              18948254 82 -  37912305 T
e Dinomys_branickii.DinBra_scaffold_10381                    96011 35 -    115145 T
e Cuniculus_paca.CunPac_flattened_line_7025                   1279 35 +     36344 T
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627 35 +     50838 T
e Cavia_tschudii.CavTsc_scaffold_23560                       60200 35 -     66877 T
e Cavia_porcellus.DS562891.1                               4997099 35 +  23407841 T
e Cavia_aperea.AVPZ01000300.1                              4993657 35 +  23392119 T
e Microgale_talazaci.MicTal_scaffold_6613                    41667 37 +    145209 T
e Echinops_telfairi.JH980293.1                            62851351 40 - 111700974 T
e Orycteropus_afer.OryAfe_flattened_line_171931              11056 37 -     14239 T
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408 29 -  20541912 T
e Pygathrix_nigripes_a.k141_215492                              5211 37 +     72585 T
e Pygathrix_nigripes_b.ctg100                                  150834 37 -   7812017 T
e Pygathrix_cinerea.k141_1153803                             24341 37 +     91421 T
e Callibella_humilis.k141_1233062                             7834 37 +     18648 T
e Perodicticus_potto.k141_1854441                            15139 37 -     24908 T
e Perodicticus_ibeanus.k141_1921260                          22769 37 +     31479 T
e Otolemur_garnettii.GL873799.1                             349529 37 +   1103335 T
e Otolemur_crassicaudatus.k141_649260                        36515 37 -     51505 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929 37 - 199412804 T
e Nycticebus_coucang.k141_8166032                             2064 37 +      2758 T
e Nycticebus_bengalensis.LG01                             93632675 37 + 196305487 T
e Loris_tardigradus.ctg83                                  5041044 37 -   6120653 T
e Loris_lydekkerianus.k141_2031736                            7384 37 +     19643 T
e Galagoides_demidoff.k141_561628                            16986 37 -     32986 T
e Galago_senegalensis.k141_991736                             4930 36 +     22493 T
e Galago_moholi.ctg3793                                     121389 36 -    137831 T
e Arctocebus_calabarensis.k141_1364444                       17350 37 -     45910 T
e Allochrocebus_solatus.k141_3554717                         15445 27 +     32033 T
e Allochrocebus_preussi.k141_1993939                         13769 28 -     21945 T
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503 37 -     31044 T
e Dasypus_novemcinctus.JH564415.1                          2107833 37 -   2246927 T
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495 37 -     19938 T
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743 37 +      5315 T
e Tupaia_tana.TupTan_flattened_line_394                       5859 37 -     70247 T
e Tupaia_chinensis.KB320699.1                              1831343 37 -   4065304 T
e Zalophus_californianus.ZalCal_flattened_line_17732         26391 37 -     86975 T
e Vulpes_lagopus.VulLag_flattened_line_12041                102738 37 -    112863 T
e Ursus_maritimus.KK499267.1                                179344 37 +   5085361 T
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224 37 -     97271 T
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227 37 -     18639 T
e Otocyon_megalotis.JAEUCK010005147.1                        37014 37 +    559221 T
e Odobenus_rosmarus.KB229312.1                             1449171 37 +   2017862 T
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975 37 +   9404916 T
e Neomonachus_schauinslandi.NINY01007730.1                11466383 37 -  31847680 T
e Mustela_putorius.JH418006.1                             14352449 37 +  14710649 T
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996 37 +     27589 T
e Mellivora_capensis.MelCap_flattened_line_19308             23509 37 -     74585 T
e Lycaon_pictus.CM007581.1                                41612373 37 +  59628241 T
e Leptonychotes_weddellii.KB714746.1                        810986 37 -   3914936 T
e Enhydra_lutris.KZ291758.1                               24913636 37 +  41312741 T
e Canis_lupus_orion.HG994398.1                            45104799 37 -  63665305 T
e Canis_lupus_familiaris.chr16                            41613218 37 +  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                          220083 37 +   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740 37 -     23171 T
e CanFam4.chr16                                           42503104 37 +  60362399 T
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672 37 -     15198 T
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834 37 +  29979442 T
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048 28 +      2695 T
e Xerus_inauris.XerIna_scaffold_2302                        171803 34 -    224448 T
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Varecia_variegata.k141_289850                              21738 36 -    147434 T
e Varecia_rubra.k141_787544                                  22831 36 -     30710 T
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988 37 -    105689 T
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579 37 +     59866 T
e Trachypithecus_phayrei.ctg124                             252848 37 -   6242583 T
e Trachypithecus_obscurus.k141_848057                         7609 37 -     13050 T
e Trachypithecus_melamera.k141_591572                          615 37 -      6147 T
e Trachypithecus_leucocephalus.k141_96450                     7187 37 +     22490 T
e Trachypithecus_laotum.k141_928651                          25744 37 -     63452 T
e Trachypithecus_hatinhensis.k141_31479                      27707 37 -     64340 T
e Trachypithecus_germaini.k141_57262                          6693 37 -     28527 T
e Trachypithecus_geei.k141_1001272                           25885 37 +     46913 T
e Trachypithecus_francoisi.k141_1453105                      25768 37 -     62838 T
e Trachypithecus_cristatus.k141_180416                       17543 37 +     25722 T
e Trachypithecus_crepusculus.k141_539312                     30906 37 -     78344 T
e Trachypithecus_auratus.k141_1189070                        18222 37 +     26378 T
e Tonatia_saurophila.TonSau_scaffold_294                    477420 37 -    610378 T
e Theropithecus_gelada.CM009954.1                           350535 23 - 186847797 T
e Tarsius_wallacei.k141_226975                                4794 37 +     20590 T
e Tarsius_lariang.k141_1780720                                4755 37 +      6850 T
e Tapirus_terrestris.TapTer_scaffold_755                    103056 37 -    539355 T
e Tapirus_indicus.TapInd_scaffold_7432                      189100 37 +    199430 T
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382 36 +      5583 T
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377 18 +     22964 T
e Symphalangus_syndactylus.tarseq_199                       388305 37 +   1523678 T
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274 33 +    196729 T
e Spermophilus_dauricus.KZ294078.1                         1866045 33 +   3870691 T
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078 38 -   1910179 T
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000 35 +     77746 T
e Semnopithecus_vetulus.k141_244474                          26080 37 -     48123 T
e Semnopithecus_schistaceus.k141_1432920                     23011 37 -     29113 T
e Semnopithecus_priam.k141_714795                            20331 37 -     42441 T
e Semnopithecus_johnii.k141_843753                           12673 37 -     45317 T
e Semnopithecus_hypoleucos.k141_1910531                      26177 37 +     58920 T
e Semnopithecus_entellus.k141_158471                         22658 37 +     27374 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762 37 +    313613 T
e Sapajus_macrocephalus.k141_796559                           5632 37 +     21866 T
e Sapajus_apella.ctg103                                     236042 37 +   5703754 T
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954 37 -      4301 T
e Saguinus_mystax.k141_8077960                                1588 37 +      5979 T
e Saguinus_midas.LG03                                       388907 37 - 209938924 T
e Saguinus_labiatus.k141_1571581                              1785 37 -      2099 T
e Saguinus_inustus.k141_2469308                               1640 37 +      5932 T
e Saguinus_imperator.k141_1898058                             1586 37 +      5971 T
e Saguinus_geoffroyi.k141_3779887                             1567 37 +      6077 T
e Saguinus_bicolor.k141_1429097                               1559 37 +     27962 T
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553 37 -    116970 T
e Rhinopithecus_strykeri.ctg102                             233778 36 -   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                    104119518 36 + 195417433 T
e Rhinopithecus_bieti.k119_221883                            26170 36 +     27361 T
e Rhinolophus_sinicus.LVEH01000134.1                       2911225 37 +   3329780 T
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575 37 +  38429054 T
e Pteropus_vampyrus.KN525825.1                             3535136 37 -   4952924 T
e Pteropus_alecto.KB030862.1                               5838570 37 -  28871421 T
e Pteronotus_parnellii.KE847780.1                            49602 37 -     66298 T
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969 36 +     35169 T
e Propithecus_tattersalli.k141_1127767                       92332 36 -     98465 T
e Propithecus_perrieri.k141_1496898                          32061 36 +     46564 T
e Propithecus_edwardsi.k141_635656                            5736 36 -     30655 T
e Propithecus_diadema.k141_153680                             2000 36 -     11706 T
e Propithecus_coronatus.k141_209299                           1403 36 -      7103 T
e Propithecus_coquerelli.NW_012148875.1                    1563767 36 -   2598838 T
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145 37 -     80239 T
e Presbytis_comata.k141_1230337                              24950 37 +     69807 T
e Plecturocebus_moloch.k141_1031110                          41783 37 +     89403 T
e Plecturocebus_miltoni.k141_349282                          40315 37 -     90634 T
e Plecturocebus_hoffmannsi.k141_3303950                      12399 37 -     67232 T
e Plecturocebus_grovesi.k141_2013005                          5463 37 -     60166 T
e Plecturocebus_dubius.k141_1058799                          40420 37 +     87928 T
e Plecturocebus_cupreus.k141_2351393                          5466 37 -     39403 T
e Plecturocebus_cinerascens.k141_1164729                     40767 37 -     88961 T
e Plecturocebus_caligatus.k141_1382851                       40374 37 -     87950 T
e Plecturocebus_brunneus.k141_862875                           970 37 -      9282 T
e Plecturocebus_bernhardi.k141_2549090                        5885 37 +     39866 T
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454 37 +     51125 T
e Pithecia_pithecia.tarseq_165                              554439 27 -   4542175 T
e Pithecia_pissinattii.k141_878371                           29470 37 +     51148 T
e Pithecia_mittermeieri.k141_1280039                         29707 37 +     63561 T
e Pithecia_hirsuta.k141_640380                               29431 37 +     58159 T
e Pithecia_chrysocephala.k141_785207                          3692 27 -     25401 T
e Pithecia_albicans.k141_1239476                             62596 37 +    207309 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564 46 +     22231 T
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453 37 +      5735 T
e Piliocolobus_kirkii.k141_579682                            44775 37 +     45295 T
e Piliocolobus_gordonorum.k141_905727                        62176 37 -     63152 T
e Piliocolobus_badius.k141_2495623                            6468 37 +      7560 T
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434 36 +  18517816 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589 37 +     78924 T
e Papio_ursinus.k141_2278143                                 19614 23 -     23640 T
e Papio_papio.k141_799093                                    12804 23 +     16796 T
e Papio_kindae.k141_2214839                                  19668 23 -     27687 T
e Papio_hamadryas.Contig39                                  288052 23 -  20919399 T
e Papio_cynocephalus.k141_1507553                             7013 23 +     21308 T
e Papio_anubis.CM001495.2                                   240549 23 - 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975 37 +   8748460 T
e Panthera_pardus.KV860321.1                              18459255 37 -  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                   21929 37 -    230217 T
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789 37 +    107918 T
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957 39 -    140218 T
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447 37 -     54323 T
e Nomascus_siki_b.tarseq_93                            8411333 37 -  22158432 T
e Nomascus_gabriellae.k141_57920                             13049 37 +     22201 T
e Nomascus_concolor.k141_735679                               7164 37 -     16345 T
e Nomascus_annamensis.k141_1771965                           51069 37 -    132029 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125173 31 -    149072 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317 37 +     34575 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264 36 +    130748 T
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625 45 +   4330536 T
e Myotis_davidii.KB100139.1                                4384803 45 +   6019432 T
e Myotis_brandtii.KE162005.1                               9790404 45 +  10118263 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388 45 +     47283 T
e Mungos_mungo.MunMun_flattened_line_18455                   15863 33 -     63510 T
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536 37 +    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mirza_zaza.k141_766280                                     50085 18 -     62432 T
e Miopithecus_ogouensis.k141_1534655                         19736 37 -     27822 T
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357 35 +    200668 T
e Microcebus_murinus.CM007674.1                           74982290 36 +  93316391 T
e Mico_schneideri.k141_1877700                                     16341 37 -     26561 T
e Mico_humeralifer.k141_1180625                               8390 37 -     12984 T
e Mico_argentatus.k141_582562                                 7606 37 +     17804 T
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130 34 +    207569 T
e Marmota_marmota.CZRN01000018.1                           7498675 33 +  40650429 T
e Manis_pentadactyla.KN006162.1                             218512 37 +    317179 T
e Manis_javanica.JSZB01003497.1                             671221 37 -    737560 T
e Mandrillus_sphinx.Contig270                               354541 23 -    752769 T
e Mandrillus_leucophaeus.scaffold280                        319709 23 +  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942 37 -    270270 T
e Macaca_tonkeana.k141_339739                                  209 17 +     17132 T
e Macaca_thibetana.k99_41370                                 19612 23 +     21031 T
e Macaca_silenus.Contig273                                  268431 37 +    668171 T
e Macaca_siberu.k141_2185972                                 42498 70 +     59329 T
e Macaca_radiata.k141_3557992                                22677 37 +     24253 T
e Macaca_nigra.k141_2818840                                  46022 37 -     62418 T
e Macaca_nemestrina.KQ007038.1                              396858 37 +  25927173 T
e Macaca_mulatta.NC_041758.1                                412635 37 - 187317192 T
e Macaca_maura.k141_1103459                                  43467 70 +     51645 T
e Macaca_leonina.k141_321385                                 33696 37 -     50087 T
e Macaca_fuscata.k119_546792                                 22506 37 +     30527 T
e Macaca_fascicularis.k141_1397292                           19657 27 -     24934 T
e Macaca_cyclopis.k119_263443                                22554 23 +     30207 T
e Macaca_assamensis.Contig5                                 370299 37 -  60120075 T
e Macaca_arctoides.k141_1757516                              42638 23 -     61512 T
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321 23 -   1826925 T
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679 36 +     16388 T
e Lepilemur_ruficaudatus.k141_330196                          6685 36 +     24756 T
e Lepilemur_dorsalis.k141_387009                              6675 36 +     31569 T
e Lepilemur_ankaranensis.k141_567626                          6678 36 +     29618 T
e Leontopithecus_rosalia.k141_349454                          9242 37 -     12945 T
e Leontopithecus_chrysomelas.k141_1327670                     7861 37 -     11567 T
e Leontocebus_nigricollis.k141_3905062                        1228 37 -      5717 T
e Leontocebus_illigeri.k141_2951200                           1597 37 +      5940 T
e Leontocebus_fuscicollis.k141_2994775                        1646 37 -     13097 T
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517 45 -     65777 T
e Lagothrix_lagothricha.k141_246028                          40966 37 +    110728 T
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885 23 +   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Indri_indri.k141_4600452                                    1394 44 -      1527 T
e Ictidomys_tridecemlineatus.JH393364.1                     384476 33 +   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837 37 +  11177569 T
e Hylobates_pileatus_b.LG02                                       2049482 37 + 191637585 T
e Hylobates_klossii.k141_738755                              10363 37 +     55766 T
e Hylobates_agilis.k141_1155965                               3180 37 +     12352 T
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590 37 +     83186 T
e Hoolock_leuconedys.ctg274                                    140145 37 -    630532 T
e Hipposideros_galeritus.HipGal_scaffold_23202               47193 37 +     49977 T
e Hipposideros_armiger.JXIK01000431.1                      1547877 37 -   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109 33 -    327341 T
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737 37 +     18121 T
e Felis_nigripes.FelNig_flattened_line_31944                 25108 37 -     30238 T
e Felis_catus_fca126.CM031415.1                          185113760 37 - 205367284 T
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Erythrocebus_patas.Contig38                               260217 37 +  21539334 T
e Equus_przewalskii.KK951119.1                              409840 36 -    498745 T
e Equus_caballus.CM000403.2                               21373054 36 +  39960074 T
e Equus_asinus.JREZ01000139.1                              3039120 36 -   4378816 T
e Eptesicus_fuscus.JH977646.1                             12576040 45 +  14770903 T
e Ellobius_talpinus.LOJH01026522.1                           10200 34 +     18970 T
e Ellobius_lutescens.LOEQ01008920.1                          28236 34 +    110024 T
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976 37 +     19438 T
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924 37 -    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139 37 -   1390856 T
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271 25 +  12879189 T
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549 38 -   1526836 T
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604 37 +     87169 T
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006 37 -     83289 T
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427 37 -      8242 T
e Condylura_cristata.JH655891.1                           35804984 37 +  53390261 T
e Colobus_polykomos.k141_1559707                              6362 37 -      6605 T
e Colobus_guereza.LG01                                      376350 37 - 200372422 T
e Colobus_angolensis.KN981557.1                             406473 37 -   2368649 T
e Chlorocebus_sabaeus.CM001947.1                            302019 37 - 135778131 T
e Chlorocebus_pygerythrus.k141_3063162                        7239 37 -     44032 T
e Chlorocebus_aethiops.ctg25                                340694 37 +  18827391 T
e Chiropotes_sagulatus.k141_1113111                           5818 37 +     34062 T
e Chiropotes_israelita.k141_313004                           40246 37 -    112038 T
e Chiropotes_albinasus.k141_1946120                           1561 37 +      5346 T
e Cheracebus_torquatus.k141_890198                           17175 37 +     39636 T
e Cheracebus_regulus.k141_471822                             17391 37 +    216457 T
e Cheracebus_lugens.k141_1179667                             17127 37 -     40346 T
e Cheracebus_lucifer.k141_2312002                             6714 37 -     32913 T
e Cheirogaleus_medius.k141_759766                             2852 36 -     15404 T
e Cheirogaleus_major.k141_666340                             28322 36 -     33796 T
e Cercopithecus_roloway.k141_3012935                         19797 37 +     36323 T
e Cercopithecus_pogonias.k141_6079                           22872 37 +     70610 T
e Cercopithecus_petaurista.k141_42573                         1353 37 +      8499 T
e Cercopithecus_nictitans.k141_2995370                       25200 37 -     32606 T
e Cercopithecus_neglectus.k141_858615                        29380 37 -     45857 T
e Cercopithecus_mona.ctg39                                  267919 37 +  21565898 T
e Cercopithecus_albogularis.ctg5                                  362211 37 -  39242232 T
e Cercopithecus_lowei.k141_2101310                            9612 37 -     25376 T
e Cercopithecus_hamlyni.k141_566925                          24903 37 -     34525 T
e Cercopithecus_diana.k141_132293                             9181 37 -     17524 T
e Cercopithecus_cephus.k141_4183004                           4991 37 +     20796 T
e Cercopithecus_ascanius.k141_3120866                        25022 30 -     40656 T
e Cercocebus_torquatus.k141_2159127                          41924 23 -    148725 T
e Cercocebus_lunulatus.k141_2779015                          41941 23 -     44860 T
e Cercocebus_chrysogaster.k141_1522556                       42108 23 +     47900 T
e Cercocebus_atys.KQ010504.1                                138368 23 -   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680 37 +     27315 T
e Cephalopachus_bancanus.k141_72622                           1235 37 -      1636 T
e Cebus_unicolor.k141_1654760                                64802 37 -     89041 T
e Cebus_olivaceus.k141_1404781                                5707 37 -     34880 T
e Cebus_albifrons.Contig27                                  368818 37 -  26074798 T
e Cebuella_pygmaea.k141_145798                               40615 37 +     53515 T
e Cebuella_niveiventris.k141_592277                           2729 37 -     12580 T
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094 36 -     39886 T
e Carlito_syrichta.NW_007259797.1                           268063 37 +    496798 T
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443 37 -     18408 T
e Callithrix_jacchus.pat_scaffold_3                      165451150 37 + 189096842 T
e Callithrix_geoffroyi.k119_473390                           16195 37 +     17162 T
e Callimico_goeldii.k141_1609886                              7497 29 -     13885 T
e Cacajao_melanocephalus.k141_619699                         18339 37 +    119600 T
e Cacajao_hosomi.k141_81245                                  18426 37 +     95584 T
e Cacajao_calvus.k141_89051                                  40900 37 -     91139 T
e Cacajao_ayresi.k141_96119                                   5606 37 +     28062 T
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889 36 -     19611 T
e Avahi_laniger.k141_2756659                                  3888 36 +     11645 T
e Ateles_paniscus.k141_866194                                20710 37 -     33135 T
e Ateles_marginatus.k141_970259                              46651 37 -     71267 T
e Ateles_geoffroyi_a.k141_1283730                              31280 37 +     44353 T
e Ateles_chamek.k141_615173                                   3727 37 -     28759 T
e Ateles_belzebuth.k141_1572163                               8590 37 +     48076 T
e Ateles_geoffroyi_b.tarseq_1536                               272423 37 +  21539123 T
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732 41 -     32367 T
e Aotus_vociferans.k141_944972                                6977 37 +      8415 T
e Aotus_trivirgatus.k141_192090                              21841 37 -     23494 T
e Aotus_nancymaae.KZ198451.1                                670199 37 +   5030052 T
e Aotus_griseimembra.k141_982342                             42186 37 +     43593 T
e Aotus_azarae.k141_118258                                   48439 37 -     65372 T
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387 37 -    412891 T
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624 37 +     42133 T
e Alouatta_puruensis.k141_251022                              6485 37 +     30854 T
e Alouatta_palliata.k141_638677                              44360 37 +     70886 T
e Alouatta_nigerrima.k141_376068                             38662 37 +     45454 T
e Alouatta_macconnelli.k141_361275                           21679 37 -     24835 T
e Alouatta_juara.k141_1687208                                40033 37 -     64179 T
e Alouatta_discolor.k141_2561099                             41595 37 +     55831 T
e Alouatta_caraya.k141_1109140                               42145 37 -     78289 T
e Alouatta_belzebul.k141_1011583                             69916 37 -     84148 T
e Allochrocebus_lhoesti.k141_441277                          41129 37 +     44087 T
e Allenopithecus_nigroviridis.k141_3755588                   45208 37 +     53615 T
e Allactaga_bullata.AllBul_scaffold_20030                    15727 23 -     61208 T
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313 37 +   1699592 T

a score=0.000000
s hg38.chrUn_KI270755v1                                       2085  95 +     36723 ttcac---caccgtagaaTTAGATGGCTTCTGCAGATACAGCTA------------------AG---tctctttcac---------------------------caccatagaattaggt-ggcttctgcagatatggctaag------------------tctt
s Gorilla_beringei.k141_3358147                               2447  98 -      8343 tccac---caccatagaattggatggattctgcaaatatggcta------------------agtcttctccttcac---------------------------caccatagaattaggt-ggcttctgcagatacggctaag------------------tctt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 68037  98 +  33314783 ttcac---caccatagaattagatggattctgcaaatatggcta------------------agtcttctccttcac---------------------------cacCATAgaattaggt-ggcttctgcagatacggctaag------------------tctt
i Gorilla_gorilla.LT578336.1                             C 0 C 0
s Pan_troglodytes.CM009242.2                               1469824 116 - 189151597 ttcac---catcataggattcggtggcttctgcagatacggcta------------------agtcttctccttcac---------------------------caccatagaattaggt-ggcttctgcaaatatggctaagAGCTTAACAACCCAACagtctt
i Pan_troglodytes.CM009242.2                             C 0 T 271
s Pongo_abelii.CM009266.2                                   174953 125 - 189387572 TTCACTTTCA---Taggattaggtggcttgtgcagatatggcta------------------aGTCTTCTCCTTCACCATAGGattaatgatttatattttcaccATCATAGGATTTGGT-GGCTTCTGCAGATATGGCTAag------------------TCTT
i Pongo_abelii.CM009266.2                                C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991  35 -     33621 T
e Petromus_typicus.PetTyp_scaffold_17301                     29661  35 -     56120 T
e Perognathus_longimembris.PerPac_flattened_line_28053       37455  83 +     38305 T
e Octodon_degus.JH651603.1                                11044981  35 -  11899542 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949  35 +    143317 T
e Heterocephalus_glaber.JH602082.1                         1924707  35 -  22651954 T
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606  34 +     14636 T
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201  82 -     10735 T
e Dipodomys_ordii.KN672350.1                              18948254  82 -  37912305 T
e Dinomys_branickii.DinBra_scaffold_10381                    96011  35 -    115145 T
e Cuniculus_paca.CunPac_flattened_line_7025                   1279  35 +     36344 T
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627  35 +     50838 T
e Cavia_tschudii.CavTsc_scaffold_23560                       60200  35 -     66877 T
e Cavia_porcellus.DS562891.1                               4997099  35 +  23407841 T
e Cavia_aperea.AVPZ01000300.1                              4993657  35 +  23392119 T
e Microgale_talazaci.MicTal_scaffold_6613                    41667  37 +    145209 T
e Echinops_telfairi.JH980293.1                            62851351  40 - 111700974 T
e Orycteropus_afer.OryAfe_flattened_line_171931              11056  37 -     14239 T
e Elephantulus_edwardii.JH947257.1                         9105070   0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408  29 -  20541912 T
e Pygathrix_nigripes_a.k141_215492                              5211  37 +     72585 T
e Pygathrix_nigripes_b.ctg100                                  150834  37 -   7812017 T
e Pygathrix_cinerea.k141_1153803                             24341  37 +     91421 T
e Callibella_humilis.k141_1233062                             7834  37 +     18648 T
e Perodicticus_potto.k141_1854441                            15139  37 -     24908 T
e Perodicticus_ibeanus.k141_1921260                          22769  37 +     31479 T
e Otolemur_garnettii.GL873799.1                             349529  37 +   1103335 T
e Otolemur_crassicaudatus.k141_649260                        36515  37 -     51505 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929  37 - 199412804 T
e Nycticebus_coucang.k141_8166032                             2064  37 +      2758 T
e Nycticebus_bengalensis.LG01                             93632675  37 + 196305487 T
e Loris_tardigradus.ctg83                                  5041044  37 -   6120653 T
e Loris_lydekkerianus.k141_2031736                            7384  37 +     19643 T
e Galagoides_demidoff.k141_561628                            16986  37 -     32986 T
e Galago_senegalensis.k141_991736                             4930  36 +     22493 T
e Galago_moholi.ctg3793                                     121389  36 -    137831 T
e Arctocebus_calabarensis.k141_1364444                       17350  37 -     45910 T
e Allochrocebus_solatus.k141_3554717                         15445  27 +     32033 T
e Allochrocebus_preussi.k141_1993939                         13769  28 -     21945 T
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503  37 -     31044 T
e Dasypus_novemcinctus.JH564415.1                          2107833  37 -   2246927 T
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495  37 -     19938 T
e Lepus_americanus.LepAme_scaffold_56121                     13679   3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743  37 +      5315 T
e Tupaia_tana.TupTan_flattened_line_394                       5859  37 -     70247 T
e Tupaia_chinensis.KB320699.1                              1831343  37 -   4065304 T
e Zalophus_californianus.ZalCal_flattened_line_17732         26391  37 -     86975 T
e Vulpes_lagopus.VulLag_flattened_line_12041                102738  37 -    112863 T
e Ursus_maritimus.KK499267.1                                179344  37 +   5085361 T
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224  37 -     97271 T
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227  37 -     18639 T
e Otocyon_megalotis.JAEUCK010005147.1                        37014  37 +    559221 T
e Odobenus_rosmarus.KB229312.1                             1449171  37 +   2017862 T
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975  37 +   9404916 T
e Neomonachus_schauinslandi.NINY01007730.1                11466383  37 -  31847680 T
e Mustela_putorius.JH418006.1                             14352449  37 +  14710649 T
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996  37 +     27589 T
e Mellivora_capensis.MelCap_flattened_line_19308             23509  37 -     74585 T
e Lycaon_pictus.CM007581.1                                41612373  37 +  59628241 T
e Leptonychotes_weddellii.KB714746.1                        810986  37 -   3914936 T
e Enhydra_lutris.KZ291758.1                               24913636  37 +  41312741 T
e Canis_lupus_orion.HG994398.1                            45104799  37 -  63665305 T
e Canis_lupus_familiaris.chr16                            41613218  37 +  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                          220083  37 +   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740  37 -     23171 T
e CanFam4.chr16                                           42503104  37 +  60362399 T
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672  37 -     15198 T
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834  37 +  29979442 T
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048  28 +      2695 T
e Xerus_inauris.XerIna_scaffold_2302                        171803  34 -    224448 T
e Vicugna_pacos.KN270157.1                                   75090   0 +   5488506 C
e Varecia_variegata.k141_289850                              21738  36 -    147434 T
e Varecia_rubra.k141_787544                                  22831  36 -     30710 T
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988  37 -    105689 T
e Tursiops_truncatus.MRVK01000835.1                       17360011   0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081   0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579  37 +     59866 T
e Trachypithecus_phayrei.ctg124                             252848  37 -   6242583 T
e Trachypithecus_obscurus.k141_848057                         7609  37 -     13050 T
e Trachypithecus_melamera.k141_591572                          615  37 -      6147 T
e Trachypithecus_leucocephalus.k141_96450                     7187  37 +     22490 T
e Trachypithecus_laotum.k141_928651                          25744  37 -     63452 T
e Trachypithecus_hatinhensis.k141_31479                      27707  37 -     64340 T
e Trachypithecus_germaini.k141_57262                          6693  37 -     28527 T
e Trachypithecus_geei.k141_1001272                           25885  37 +     46913 T
e Trachypithecus_francoisi.k141_1453105                      25768  37 -     62838 T
e Trachypithecus_cristatus.k141_180416                       17543  37 +     25722 T
e Trachypithecus_crepusculus.k141_539312                     30906  37 -     78344 T
e Trachypithecus_auratus.k141_1189070                        18222  37 +     26378 T
e Tonatia_saurophila.TonSau_scaffold_294                    477420  37 -    610378 T
e Theropithecus_gelada.CM009954.1                           350535  23 - 186847797 T
e Tarsius_wallacei.k141_226975                                4794  37 +     20590 T
e Tarsius_lariang.k141_1780720                                4755  37 +      6850 T
e Tapirus_terrestris.TapTer_scaffold_755                    103056  37 -    539355 T
e Tapirus_indicus.TapInd_scaffold_7432                      189100  37 +    199430 T
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382  36 +      5583 T
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377  18 +     22964 T
e Symphalangus_syndactylus.tarseq_199                       388305  37 +   1523678 T
e Sus_scrofa.CM000828.4                                    6639884   0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274  33 +    196729 T
e Spermophilus_dauricus.KZ294078.1                         1866045  33 +   3870691 T
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078  38 -   1910179 T
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000  35 +     77746 T
e Semnopithecus_vetulus.k141_244474                          26080  37 -     48123 T
e Semnopithecus_schistaceus.k141_1432920                     23011  37 -     29113 T
e Semnopithecus_priam.k141_714795                            20331  37 -     42441 T
e Semnopithecus_johnii.k141_843753                           12673  37 -     45317 T
e Semnopithecus_hypoleucos.k141_1910531                      26177  37 +     58920 T
e Semnopithecus_entellus.k141_158471                         22658  37 +     27374 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762  37 +    313613 T
e Sapajus_macrocephalus.k141_796559                           5632  37 +     21866 T
e Sapajus_apella.ctg103                                     236042  37 +   5703754 T
e Saiga_tatarica.SaiTat_scaffold_39512                        6468   0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954  37 -      4301 T
e Saguinus_mystax.k141_8077960                                1588  37 +      5979 T
e Saguinus_midas.LG03                                       388907  37 - 209938924 T
e Saguinus_labiatus.k141_1571581                              1785  37 -      2099 T
e Saguinus_inustus.k141_2469308                               1640  37 +      5932 T
e Saguinus_imperator.k141_1898058                             1586  37 +      5971 T
e Saguinus_geoffroyi.k141_3779887                             1567  37 +      6077 T
e Saguinus_bicolor.k141_1429097                               1559  37 +     27962 T
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553  37 -    116970 T
e Rhinopithecus_strykeri.ctg102                             233778  36 -   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                    104119518  36 + 195417433 T
e Rhinopithecus_bieti.k119_221883                            26170  36 +     27361 T
e Rhinolophus_sinicus.LVEH01000134.1                       2911225  37 +   3329780 T
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815   0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575  37 +  38429054 T
e Pteropus_vampyrus.KN525825.1                             3535136  37 -   4952924 T
e Pteropus_alecto.KB030862.1                               5838570  37 -  28871421 T
e Pteronotus_parnellii.KE847780.1                            49602  37 -     66298 T
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969  36 +     35169 T
e Propithecus_tattersalli.k141_1127767                       92332  36 -     98465 T
e Propithecus_perrieri.k141_1496898                          32061  36 +     46564 T
e Propithecus_edwardsi.k141_635656                            5736  36 -     30655 T
e Propithecus_diadema.k141_153680                             2000  36 -     11706 T
e Propithecus_coronatus.k141_209299                           1403  36 -      7103 T
e Propithecus_coquerelli.NW_012148875.1                    1563767  36 -   2598838 T
e Prolemur_simus.MPIZ01000396.1                            1980511   0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145  37 -     80239 T
e Presbytis_comata.k141_1230337                              24950  37 +     69807 T
e Pongo_pygmaeus.ctg66                                      189949   0 -   9816681 C
e Plecturocebus_moloch.k141_1031110                          41783  37 +     89403 T
e Plecturocebus_miltoni.k141_349282                          40315  37 -     90634 T
e Plecturocebus_hoffmannsi.k141_3303950                      12399  37 -     67232 T
e Plecturocebus_grovesi.k141_2013005                          5463  37 -     60166 T
e Plecturocebus_dubius.k141_1058799                          40420  37 +     87928 T
e Plecturocebus_cupreus.k141_2351393                          5466  37 -     39403 T
e Plecturocebus_cinerascens.k141_1164729                     40767  37 -     88961 T
e Plecturocebus_caligatus.k141_1382851                       40374  37 -     87950 T
e Plecturocebus_brunneus.k141_862875                           970  37 -      9282 T
e Plecturocebus_bernhardi.k141_2549090                        5885  37 +     39866 T
e Platanista_gangetica.PlaMin_flattened_line_167872           3214   0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454  37 +     51125 T
e Pithecia_pithecia.tarseq_165                              554439  27 -   4542175 T
e Pithecia_pissinattii.k141_878371                           29470  37 +     51148 T
e Pithecia_mittermeieri.k141_1280039                         29707  37 +     63561 T
e Pithecia_hirsuta.k141_640380                               29431  37 +     58159 T
e Pithecia_chrysocephala.k141_785207                          3692  27 -     25401 T
e Pithecia_albicans.k141_1239476                             62596  37 +    207309 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564  46 +     22231 T
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453  37 +      5735 T
e Piliocolobus_kirkii.k141_579682                            44775  37 +     45295 T
e Piliocolobus_gordonorum.k141_905727                        62176  37 -     63152 T
e Piliocolobus_badius.k141_2495623                            6468  37 +      7560 T
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130   0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434  36 +  18517816 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589  37 +     78924 T
e Papio_ursinus.k141_2278143                                 19614  23 -     23640 T
e Papio_papio.k141_799093                                    12804  23 +     16796 T
e Papio_kindae.k141_2214839                                  19668  23 -     27687 T
e Papio_hamadryas.Contig39                                  288052  23 -  20919399 T
e Papio_cynocephalus.k141_1507553                             7013  23 +     21308 T
e Papio_anubis.CM001495.2                                   240549  23 - 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1614318   0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975  37 +   8748460 T
e Panthera_pardus.KV860321.1                              18459255  37 -  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                   21929  37 -    230217 T
e Ovis_canadensis.OviCan_scaffold_67953                       3394   0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875   0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566   3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272   0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789  37 +    107918 T
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957  39 -    140218 T
e Okapia_johnstoni.LVCL01S0005463.1                          12886   0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894   0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447  37 -     54323 T
e Nomascus_siki_b.tarseq_93                            8411333  37 -  22158432 T
e Nomascus_gabriellae.k141_57920                             13049  37 +     22201 T
e Nomascus_concolor.k141_735679                               7164  37 -     16345 T
e Nomascus_annamensis.k141_1771965                           51069  37 -    132029 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125173  31 -    149072 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002   0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317  37 +     34575 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264  36 +    130748 T
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625  45 +   4330536 T
e Myotis_davidii.KB100139.1                                4384803  45 +   6019432 T
e Myotis_brandtii.KE162005.1                               9790404  45 +  10118263 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388  45 +     47283 T
e Mungos_mungo.MunMun_flattened_line_18455                   15863  33 -     63510 T
e Moschus_moschiferus.MosMos_scaffold_13123                  22907   0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536  37 +    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                   351833   0 +    437263 C
e Mirza_zaza.k141_766280                                     50085  18 -     62432 T
e Miopithecus_ogouensis.k141_1534655                         19736  37 -     27822 T
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357  35 +    200668 T
e Microcebus_murinus.CM007674.1                           74982290  36 +  93316391 T
e Mico_schneideri.k141_1877700                                     16341  37 -     26561 T
e Mico_humeralifer.k141_1180625                               8390  37 -     12984 T
e Mico_argentatus.k141_582562                                 7606  37 +     17804 T
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944   0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791   5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130  34 +    207569 T
e Marmota_marmota.CZRN01000018.1                           7498675  33 +  40650429 T
e Manis_pentadactyla.KN006162.1                             218512  37 +    317179 T
e Manis_javanica.JSZB01003497.1                             671221  37 -    737560 T
e Mandrillus_sphinx.Contig270                               354541  23 -    752769 T
e Mandrillus_leucophaeus.scaffold280                        319709  23 +  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942  37 -    270270 T
e Macaca_tonkeana.k141_339739                                  209  17 +     17132 T
e Macaca_thibetana.k99_41370                                 19612  23 +     21031 T
e Macaca_silenus.Contig273                                  268431  37 +    668171 T
e Macaca_siberu.k141_2185972                                 42498  70 +     59329 T
e Macaca_radiata.k141_3557992                                22677  37 +     24253 T
e Macaca_nigra.k141_2818840                                  46022  37 -     62418 T
e Macaca_nemestrina.KQ007038.1                              396858  37 +  25927173 T
e Macaca_mulatta.NC_041758.1                                412635  37 - 187317192 T
e Macaca_maura.k141_1103459                                  43467  70 +     51645 T
e Macaca_leonina.k141_321385                                 33696  37 -     50087 T
e Macaca_fuscata.k119_546792                                 22506  37 +     30527 T
e Macaca_fascicularis.k141_1397292                           19657  27 -     24934 T
e Macaca_cyclopis.k119_263443                                22554  23 +     30207 T
e Macaca_assamensis.Contig5                                 370299  37 -  60120075 T
e Macaca_arctoides.k141_1757516                              42638  23 -     61512 T
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321  23 -   1826925 T
e Lipotes_vexillifer.KE559953.1                             333400   0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679  36 +     16388 T
e Lepilemur_ruficaudatus.k141_330196                          6685  36 +     24756 T
e Lepilemur_dorsalis.k141_387009                              6675  36 +     31569 T
e Lepilemur_ankaranensis.k141_567626                          6678  36 +     29618 T
e Leontopithecus_rosalia.k141_349454                          9242  37 -     12945 T
e Leontopithecus_chrysomelas.k141_1327670                     7861  37 -     11567 T
e Leontocebus_nigricollis.k141_3905062                        1228  37 -      5717 T
e Leontocebus_illigeri.k141_2951200                           1597  37 +      5940 T
e Leontocebus_fuscicollis.k141_2994775                        1646  37 -     13097 T
e Lemur_catta.scaffold_24                                 14757355   0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517  45 -     65777 T
e Lagothrix_lagothricha.k141_246028                          40966  37 +    110728 T
e Kogia_breviceps.KogBre_flattened_line_3970                 64366   0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885  23 +   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877   0 -     16823 C
e Indri_indri.k141_4600452                                    1394  44 -      1527 T
e Ictidomys_tridecemlineatus.JH393364.1                     384476  33 +   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837  37 +  11177569 T
e Hylobates_pileatus_b.LG02                                       2049482  37 + 191637585 T
e Hylobates_klossii.k141_738755                              10363  37 +     55766 T
e Hylobates_agilis.k141_1155965                               3180  37 +     12352 T
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590  37 +     83186 T
e Hoolock_leuconedys.ctg274                                    140145  37 -    630532 T
e Hipposideros_galeritus.HipGal_scaffold_23202               47193  37 +     49977 T
e Hipposideros_armiger.JXIK01000431.1                      1547877  37 -   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354   0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755   0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109  33 -    327341 T
e Hapalemur_occidentalis.k141_578367                         14707   0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707   0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834   0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965   0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564   0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002   0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737  37 +     18121 T
e Felis_nigripes.FelNig_flattened_line_31944                 25108  37 -     30238 T
e Felis_catus_fca126.CM031415.1                          185113760  37 - 205367284 T
e Eulemur_sanfordi.k141_1122526                              56878   0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477   0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754   0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027   0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834   0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204   0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879   0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306   0 +    112731 C
e Eulemur_collaris.k141_601111                               40347   0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635   0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857   0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641   0 -    133382 C
e Erythrocebus_patas.Contig38                               260217  37 +  21539334 T
e Equus_przewalskii.KK951119.1                              409840  36 -    498745 T
e Equus_caballus.CM000403.2                               21373054  36 +  39960074 T
e Equus_asinus.JREZ01000139.1                              3039120  36 -   4378816 T
e Eptesicus_fuscus.JH977646.1                             12576040  45 +  14770903 T
e Ellobius_talpinus.LOJH01026522.1                           10200  34 +     18970 T
e Ellobius_lutescens.LOEQ01008920.1                          28236  34 +    110024 T
e Elaphurus_davidianus.JRFZ01104969.1                       238323   0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976  37 +     19438 T
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924  37 -    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139  37 -   1390856 T
e Delphinapterus_leucas.KZ290073.1                        18624090   0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271  25 +  12879189 T
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549  38 -   1526836 T
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604  37 +     87169 T
e Cricetulus_griseus.LT883664.1                          213112278   5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006  37 -     83289 T
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427  37 -      8242 T
e Condylura_cristata.JH655891.1                           35804984  37 +  53390261 T
e Colobus_polykomos.k141_1559707                              6362  37 -      6605 T
e Colobus_guereza.LG01                                      376350  37 - 200372422 T
e Colobus_angolensis.KN981557.1                             406473  37 -   2368649 T
e Chlorocebus_sabaeus.CM001947.1                            302019  37 - 135778131 T
e Chlorocebus_pygerythrus.k141_3063162                        7239  37 -     44032 T
e Chlorocebus_aethiops.ctg25                                340694  37 +  18827391 T
e Chiropotes_sagulatus.k141_1113111                           5818  37 +     34062 T
e Chiropotes_israelita.k141_313004                           40246  37 -    112038 T
e Chiropotes_albinasus.k141_1946120                           1561  37 +      5346 T
e Cheracebus_torquatus.k141_890198                           17175  37 +     39636 T
e Cheracebus_regulus.k141_471822                             17391  37 +    216457 T
e Cheracebus_lugens.k141_1179667                             17127  37 -     40346 T
e Cheracebus_lucifer.k141_2312002                             6714  37 -     32913 T
e Cheirogaleus_medius.k141_759766                             2852  36 -     15404 T
e Cheirogaleus_major.k141_666340                             28322  36 -     33796 T
e Cercopithecus_roloway.k141_3012935                         19797  37 +     36323 T
e Cercopithecus_pogonias.k141_6079                           22872  37 +     70610 T
e Cercopithecus_petaurista.k141_42573                         1353  37 +      8499 T
e Cercopithecus_nictitans.k141_2995370                       25200  37 -     32606 T
e Cercopithecus_neglectus.k141_858615                        29380  37 -     45857 T
e Cercopithecus_mona.ctg39                                  267919  37 +  21565898 T
e Cercopithecus_albogularis.ctg5                                  362211  37 -  39242232 T
e Cercopithecus_lowei.k141_2101310                            9612  37 -     25376 T
e Cercopithecus_hamlyni.k141_566925                          24903  37 -     34525 T
e Cercopithecus_diana.k141_132293                             9181  37 -     17524 T
e Cercopithecus_cephus.k141_4183004                           4991  37 +     20796 T
e Cercopithecus_ascanius.k141_3120866                        25022  30 -     40656 T
e Cercocebus_torquatus.k141_2159127                          41924  23 -    148725 T
e Cercocebus_lunulatus.k141_2779015                          41941  23 -     44860 T
e Cercocebus_chrysogaster.k141_1522556                       42108  23 +     47900 T
e Cercocebus_atys.KQ010504.1                                138368  23 -   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680  37 +     27315 T
e Cephalopachus_bancanus.k141_72622                           1235  37 -      1636 T
e Cebus_unicolor.k141_1654760                                64802  37 -     89041 T
e Cebus_olivaceus.k141_1404781                                5707  37 -     34880 T
e Cebus_albifrons.Contig27                                  368818  37 -  26074798 T
e Cebuella_pygmaea.k141_145798                               40615  37 +     53515 T
e Cebuella_niveiventris.k141_592277                           2729  37 -     12580 T
e Catagonus_wagneri.CatWag_scaffold_2839                     75421   0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094  36 -     39886 T
e Carlito_syrichta.NW_007259797.1                           268063  37 +    496798 T
e Capra_hircus.CM004588.1                                 26589921   0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648   0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698   0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038   0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752   0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443  37 -     18408 T
e Callithrix_jacchus.pat_scaffold_3                      165451150  37 + 189096842 T
e Callithrix_geoffroyi.k119_473390                           16195  37 +     17162 T
e Callimico_goeldii.k141_1609886                              7497  29 -     13885 T
e Cacajao_melanocephalus.k141_619699                         18339  37 +    119600 T
e Cacajao_hosomi.k141_81245                                  18426  37 +     95584 T
e Cacajao_calvus.k141_89051                                  40900  37 -     91139 T
e Cacajao_ayresi.k141_96119                                   5606  37 +     28062 T
e Bubalus_bubalis.KI419123.1                               1528583   0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559   0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420   0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852   0 +  48749331 C
e Bison_bison.KN261452.1                                     20465   0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932   0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970   0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762   0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889  36 -     19611 T
e Avahi_laniger.k141_2756659                                  3888  36 +     11645 T
e Ateles_paniscus.k141_866194                                20710  37 -     33135 T
e Ateles_marginatus.k141_970259                              46651  37 -     71267 T
e Ateles_geoffroyi_a.k141_1283730                              31280  37 +     44353 T
e Ateles_chamek.k141_615173                                   3727  37 -     28759 T
e Ateles_belzebuth.k141_1572163                               8590  37 +     48076 T
e Ateles_geoffroyi_b.tarseq_1536                               272423  37 +  21539123 T
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732  41 -     32367 T
e Aotus_vociferans.k141_944972                                6977  37 +      8415 T
e Aotus_trivirgatus.k141_192090                              21841  37 -     23494 T
e Aotus_nancymaae.KZ198451.1                                670199  37 +   5030052 T
e Aotus_griseimembra.k141_982342                             42186  37 +     43593 T
e Aotus_azarae.k141_118258                                   48439  37 -     65372 T
e Antilocapra_americana.AntAmePen_scaffold_21030             49036   0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387  37 -    412891 T
e Ammotragus_lervia.NIVO01071767.1                         1583937   0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624  37 +     42133 T
e Alouatta_puruensis.k141_251022                              6485  37 +     30854 T
e Alouatta_palliata.k141_638677                              44360  37 +     70886 T
e Alouatta_nigerrima.k141_376068                             38662  37 +     45454 T
e Alouatta_macconnelli.k141_361275                           21679  37 -     24835 T
e Alouatta_juara.k141_1687208                                40033  37 -     64179 T
e Alouatta_discolor.k141_2561099                             41595  37 +     55831 T
e Alouatta_caraya.k141_1109140                               42145  37 -     78289 T
e Alouatta_belzebul.k141_1011583                             69916  37 -     84148 T
e Allochrocebus_lhoesti.k141_441277                          41129  37 +     44087 T
e Allenopithecus_nigroviridis.k141_3755588                   45208  37 +     53615 T
e Allactaga_bullata.AllBul_scaffold_20030                    15727  23 -     61208 T
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962   9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313  37 +   1699592 T

a score=0.000000
s hg38.chrUn_KI270755v1                                       2180 50 +     36723 ctccttcaccaccatagaattaggtggc---ttctgc-agatatggc-taagtct
s Gorilla_beringei.k141_3358147                               2545 42 -      8343 ctccttcaacttcatagaattaggtggc---ttctgc-agatatgg---------
i Gorilla_beringei.k141_3358147                          C 0 I 5
s Gorilla_gorilla.LT578336.1                                 68135 21 +  33314783 ctccttcacC--CATAGAATTAG--------------------------------
i Gorilla_gorilla.LT578336.1                             C 0 C 0
s Pan_troglodytes.KZ622849.1                                 30501 50 -    110857 ctccttcaccttcataggattaggtggc---ttctgc-agatatggc-taagtct
i Pan_troglodytes.KZ622849.1                             I 98 I 346
s Pongo_abelii.CM009266.2                                   175078 50 - 189387572 CTCCTTCACCatCATaggattagatgga---ttctgc-agatacggc-taagtCT
i Pongo_abelii.CM009266.2                                C 0 I 12
s Pongo_pygmaeus.ctg66                                      189949 21 -   9816681 --CCTTCACCACCATAGAATTAG--------------------------------
i Pongo_pygmaeus.ctg66                                   C 0 T 115
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991 35 -     33621 T
e Petromus_typicus.PetTyp_scaffold_17301                     29661 35 -     56120 T
e Perognathus_longimembris.PerPac_flattened_line_28053       37455 83 +     38305 T
e Octodon_degus.JH651603.1                                11044981 35 -  11899542 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949 35 +    143317 T
e Heterocephalus_glaber.JH602082.1                         1924707 35 -  22651954 T
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606 34 +     14636 T
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201 82 -     10735 T
e Dipodomys_ordii.KN672350.1                              18948254 82 -  37912305 T
e Dinomys_branickii.DinBra_scaffold_10381                    96011 35 -    115145 T
e Cuniculus_paca.CunPac_flattened_line_7025                   1279 35 +     36344 T
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627 35 +     50838 T
e Cavia_tschudii.CavTsc_scaffold_23560                       60200 35 -     66877 T
e Cavia_porcellus.DS562891.1                               4997099 35 +  23407841 T
e Cavia_aperea.AVPZ01000300.1                              4993657 35 +  23392119 T
e Microgale_talazaci.MicTal_scaffold_6613                    41667 37 +    145209 T
e Echinops_telfairi.JH980293.1                            62851351 40 - 111700974 T
e Orycteropus_afer.OryAfe_flattened_line_171931              11056 37 -     14239 T
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408 29 -  20541912 T
e Pygathrix_nigripes_a.k141_215492                              5211 37 +     72585 T
e Pygathrix_nigripes_b.ctg100                                  150834 37 -   7812017 T
e Pygathrix_cinerea.k141_1153803                             24341 37 +     91421 T
e Callibella_humilis.k141_1233062                             7834 37 +     18648 T
e Perodicticus_potto.k141_1854441                            15139 37 -     24908 T
e Perodicticus_ibeanus.k141_1921260                          22769 37 +     31479 T
e Otolemur_garnettii.GL873799.1                             349529 37 +   1103335 T
e Otolemur_crassicaudatus.k141_649260                        36515 37 -     51505 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929 37 - 199412804 T
e Nycticebus_coucang.k141_8166032                             2064 37 +      2758 T
e Nycticebus_bengalensis.LG01                             93632675 37 + 196305487 T
e Loris_tardigradus.ctg83                                  5041044 37 -   6120653 T
e Loris_lydekkerianus.k141_2031736                            7384 37 +     19643 T
e Galagoides_demidoff.k141_561628                            16986 37 -     32986 T
e Galago_senegalensis.k141_991736                             4930 36 +     22493 T
e Galago_moholi.ctg3793                                     121389 36 -    137831 T
e Arctocebus_calabarensis.k141_1364444                       17350 37 -     45910 T
e Allochrocebus_solatus.k141_3554717                         15445 27 +     32033 T
e Allochrocebus_preussi.k141_1993939                         13769 28 -     21945 T
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503 37 -     31044 T
e Dasypus_novemcinctus.JH564415.1                          2107833 37 -   2246927 T
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495 37 -     19938 T
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743 37 +      5315 T
e Tupaia_tana.TupTan_flattened_line_394                       5859 37 -     70247 T
e Tupaia_chinensis.KB320699.1                              1831343 37 -   4065304 T
e Zalophus_californianus.ZalCal_flattened_line_17732         26391 37 -     86975 T
e Vulpes_lagopus.VulLag_flattened_line_12041                102738 37 -    112863 T
e Ursus_maritimus.KK499267.1                                179344 37 +   5085361 T
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224 37 -     97271 T
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227 37 -     18639 T
e Otocyon_megalotis.JAEUCK010005147.1                        37014 37 +    559221 T
e Odobenus_rosmarus.KB229312.1                             1449171 37 +   2017862 T
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975 37 +   9404916 T
e Neomonachus_schauinslandi.NINY01007730.1                11466383 37 -  31847680 T
e Mustela_putorius.JH418006.1                             14352449 37 +  14710649 T
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996 37 +     27589 T
e Mellivora_capensis.MelCap_flattened_line_19308             23509 37 -     74585 T
e Lycaon_pictus.CM007581.1                                41612373 37 +  59628241 T
e Leptonychotes_weddellii.KB714746.1                        810986 37 -   3914936 T
e Enhydra_lutris.KZ291758.1                               24913636 37 +  41312741 T
e Canis_lupus_orion.HG994398.1                            45104799 37 -  63665305 T
e Canis_lupus_familiaris.chr16                            41613218 37 +  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                          220083 37 +   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740 37 -     23171 T
e CanFam4.chr16                                           42503104 37 +  60362399 T
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672 37 -     15198 T
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834 37 +  29979442 T
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048 28 +      2695 T
e Xerus_inauris.XerIna_scaffold_2302                        171803 34 -    224448 T
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Varecia_variegata.k141_289850                              21738 36 -    147434 T
e Varecia_rubra.k141_787544                                  22831 36 -     30710 T
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988 37 -    105689 T
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579 37 +     59866 T
e Trachypithecus_phayrei.ctg124                             252848 37 -   6242583 T
e Trachypithecus_obscurus.k141_848057                         7609 37 -     13050 T
e Trachypithecus_melamera.k141_591572                          615 37 -      6147 T
e Trachypithecus_leucocephalus.k141_96450                     7187 37 +     22490 T
e Trachypithecus_laotum.k141_928651                          25744 37 -     63452 T
e Trachypithecus_hatinhensis.k141_31479                      27707 37 -     64340 T
e Trachypithecus_germaini.k141_57262                          6693 37 -     28527 T
e Trachypithecus_geei.k141_1001272                           25885 37 +     46913 T
e Trachypithecus_francoisi.k141_1453105                      25768 37 -     62838 T
e Trachypithecus_cristatus.k141_180416                       17543 37 +     25722 T
e Trachypithecus_crepusculus.k141_539312                     30906 37 -     78344 T
e Trachypithecus_auratus.k141_1189070                        18222 37 +     26378 T
e Tonatia_saurophila.TonSau_scaffold_294                    477420 37 -    610378 T
e Theropithecus_gelada.CM009954.1                           350535 23 - 186847797 T
e Tarsius_wallacei.k141_226975                                4794 37 +     20590 T
e Tarsius_lariang.k141_1780720                                4755 37 +      6850 T
e Tapirus_terrestris.TapTer_scaffold_755                    103056 37 -    539355 T
e Tapirus_indicus.TapInd_scaffold_7432                      189100 37 +    199430 T
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382 36 +      5583 T
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377 18 +     22964 T
e Symphalangus_syndactylus.tarseq_199                       388305 37 +   1523678 T
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274 33 +    196729 T
e Spermophilus_dauricus.KZ294078.1                         1866045 33 +   3870691 T
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078 38 -   1910179 T
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000 35 +     77746 T
e Semnopithecus_vetulus.k141_244474                          26080 37 -     48123 T
e Semnopithecus_schistaceus.k141_1432920                     23011 37 -     29113 T
e Semnopithecus_priam.k141_714795                            20331 37 -     42441 T
e Semnopithecus_johnii.k141_843753                           12673 37 -     45317 T
e Semnopithecus_hypoleucos.k141_1910531                      26177 37 +     58920 T
e Semnopithecus_entellus.k141_158471                         22658 37 +     27374 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762 37 +    313613 T
e Sapajus_macrocephalus.k141_796559                           5632 37 +     21866 T
e Sapajus_apella.ctg103                                     236042 37 +   5703754 T
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954 37 -      4301 T
e Saguinus_mystax.k141_8077960                                1588 37 +      5979 T
e Saguinus_midas.LG03                                       388907 37 - 209938924 T
e Saguinus_labiatus.k141_1571581                              1785 37 -      2099 T
e Saguinus_inustus.k141_2469308                               1640 37 +      5932 T
e Saguinus_imperator.k141_1898058                             1586 37 +      5971 T
e Saguinus_geoffroyi.k141_3779887                             1567 37 +      6077 T
e Saguinus_bicolor.k141_1429097                               1559 37 +     27962 T
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553 37 -    116970 T
e Rhinopithecus_strykeri.ctg102                             233778 36 -   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                    104119518 36 + 195417433 T
e Rhinopithecus_bieti.k119_221883                            26170 36 +     27361 T
e Rhinolophus_sinicus.LVEH01000134.1                       2911225 37 +   3329780 T
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575 37 +  38429054 T
e Pteropus_vampyrus.KN525825.1                             3535136 37 -   4952924 T
e Pteropus_alecto.KB030862.1                               5838570 37 -  28871421 T
e Pteronotus_parnellii.KE847780.1                            49602 37 -     66298 T
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969 36 +     35169 T
e Propithecus_tattersalli.k141_1127767                       92332 36 -     98465 T
e Propithecus_perrieri.k141_1496898                          32061 36 +     46564 T
e Propithecus_edwardsi.k141_635656                            5736 36 -     30655 T
e Propithecus_diadema.k141_153680                             2000 36 -     11706 T
e Propithecus_coronatus.k141_209299                           1403 36 -      7103 T
e Propithecus_coquerelli.NW_012148875.1                    1563767 36 -   2598838 T
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145 37 -     80239 T
e Presbytis_comata.k141_1230337                              24950 37 +     69807 T
e Plecturocebus_moloch.k141_1031110                          41783 37 +     89403 T
e Plecturocebus_miltoni.k141_349282                          40315 37 -     90634 T
e Plecturocebus_hoffmannsi.k141_3303950                      12399 37 -     67232 T
e Plecturocebus_grovesi.k141_2013005                          5463 37 -     60166 T
e Plecturocebus_dubius.k141_1058799                          40420 37 +     87928 T
e Plecturocebus_cupreus.k141_2351393                          5466 37 -     39403 T
e Plecturocebus_cinerascens.k141_1164729                     40767 37 -     88961 T
e Plecturocebus_caligatus.k141_1382851                       40374 37 -     87950 T
e Plecturocebus_brunneus.k141_862875                           970 37 -      9282 T
e Plecturocebus_bernhardi.k141_2549090                        5885 37 +     39866 T
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454 37 +     51125 T
e Pithecia_pithecia.tarseq_165                              554439 27 -   4542175 T
e Pithecia_pissinattii.k141_878371                           29470 37 +     51148 T
e Pithecia_mittermeieri.k141_1280039                         29707 37 +     63561 T
e Pithecia_hirsuta.k141_640380                               29431 37 +     58159 T
e Pithecia_chrysocephala.k141_785207                          3692 27 -     25401 T
e Pithecia_albicans.k141_1239476                             62596 37 +    207309 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564 46 +     22231 T
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453 37 +      5735 T
e Piliocolobus_kirkii.k141_579682                            44775 37 +     45295 T
e Piliocolobus_gordonorum.k141_905727                        62176 37 -     63152 T
e Piliocolobus_badius.k141_2495623                            6468 37 +      7560 T
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434 36 +  18517816 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589 37 +     78924 T
e Papio_ursinus.k141_2278143                                 19614 23 -     23640 T
e Papio_papio.k141_799093                                    12804 23 +     16796 T
e Papio_kindae.k141_2214839                                  19668 23 -     27687 T
e Papio_hamadryas.Contig39                                  288052 23 -  20919399 T
e Papio_cynocephalus.k141_1507553                             7013 23 +     21308 T
e Papio_anubis.CM001495.2                                   240549 23 - 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975 37 +   8748460 T
e Panthera_pardus.KV860321.1                              18459255 37 -  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                   21929 37 -    230217 T
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789 37 +    107918 T
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957 39 -    140218 T
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447 37 -     54323 T
e Nomascus_siki_b.tarseq_93                            8411333 37 -  22158432 T
e Nomascus_gabriellae.k141_57920                             13049 37 +     22201 T
e Nomascus_concolor.k141_735679                               7164 37 -     16345 T
e Nomascus_annamensis.k141_1771965                           51069 37 -    132029 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125173 31 -    149072 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317 37 +     34575 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264 36 +    130748 T
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625 45 +   4330536 T
e Myotis_davidii.KB100139.1                                4384803 45 +   6019432 T
e Myotis_brandtii.KE162005.1                               9790404 45 +  10118263 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388 45 +     47283 T
e Mungos_mungo.MunMun_flattened_line_18455                   15863 33 -     63510 T
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536 37 +    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50085 18 -     62432 T
e Miopithecus_ogouensis.k141_1534655                         19736 37 -     27822 T
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357 35 +    200668 T
e Microcebus_murinus.CM007674.1                           74982290 36 +  93316391 T
e Mico_schneideri.k141_1877700                                     16341 37 -     26561 T
e Mico_humeralifer.k141_1180625                               8390 37 -     12984 T
e Mico_argentatus.k141_582562                                 7606 37 +     17804 T
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130 34 +    207569 T
e Marmota_marmota.CZRN01000018.1                           7498675 33 +  40650429 T
e Manis_pentadactyla.KN006162.1                             218512 37 +    317179 T
e Manis_javanica.JSZB01003497.1                             671221 37 -    737560 T
e Mandrillus_sphinx.Contig270                               354541 23 -    752769 T
e Mandrillus_leucophaeus.scaffold280                        319709 23 +  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942 37 -    270270 T
e Macaca_tonkeana.k141_339739                                  209 17 +     17132 T
e Macaca_thibetana.k99_41370                                 19612 23 +     21031 T
e Macaca_silenus.Contig273                                  268431 37 +    668171 T
e Macaca_siberu.k141_2185972                                 42498 70 +     59329 T
e Macaca_radiata.k141_3557992                                22677 37 +     24253 T
e Macaca_nigra.k141_2818840                                  46022 37 -     62418 T
e Macaca_nemestrina.KQ007038.1                              396858 37 +  25927173 T
e Macaca_mulatta.NC_041758.1                                412635 37 - 187317192 T
e Macaca_maura.k141_1103459                                  43467 70 +     51645 T
e Macaca_leonina.k141_321385                                 33696 37 -     50087 T
e Macaca_fuscata.k119_546792                                 22506 37 +     30527 T
e Macaca_fascicularis.k141_1397292                           19657 27 -     24934 T
e Macaca_cyclopis.k119_263443                                22554 23 +     30207 T
e Macaca_assamensis.Contig5                                 370299 37 -  60120075 T
e Macaca_arctoides.k141_1757516                              42638 23 -     61512 T
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321 23 -   1826925 T
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679 36 +     16388 T
e Lepilemur_ruficaudatus.k141_330196                          6685 36 +     24756 T
e Lepilemur_dorsalis.k141_387009                              6675 36 +     31569 T
e Lepilemur_ankaranensis.k141_567626                          6678 36 +     29618 T
e Leontopithecus_rosalia.k141_349454                          9242 37 -     12945 T
e Leontopithecus_chrysomelas.k141_1327670                     7861 37 -     11567 T
e Leontocebus_nigricollis.k141_3905062                        1228 37 -      5717 T
e Leontocebus_illigeri.k141_2951200                           1597 37 +      5940 T
e Leontocebus_fuscicollis.k141_2994775                        1646 37 -     13097 T
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517 45 -     65777 T
e Lagothrix_lagothricha.k141_246028                          40966 37 +    110728 T
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885 23 +   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Indri_indri.k141_4600452                                    1394 44 -      1527 T
e Ictidomys_tridecemlineatus.JH393364.1                     384476 33 +   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837 37 +  11177569 T
e Hylobates_pileatus_b.LG02                                       2049482 37 + 191637585 T
e Hylobates_klossii.k141_738755                              10363 37 +     55766 T
e Hylobates_agilis.k141_1155965                               3180 37 +     12352 T
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590 37 +     83186 T
e Hoolock_leuconedys.ctg274                                    140145 37 -    630532 T
e Hipposideros_galeritus.HipGal_scaffold_23202               47193 37 +     49977 T
e Hipposideros_armiger.JXIK01000431.1                      1547877 37 -   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109 33 -    327341 T
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737 37 +     18121 T
e Felis_nigripes.FelNig_flattened_line_31944                 25108 37 -     30238 T
e Felis_catus_fca126.CM031415.1                          185113760 37 - 205367284 T
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Erythrocebus_patas.Contig38                               260217 37 +  21539334 T
e Equus_przewalskii.KK951119.1                              409840 36 -    498745 T
e Equus_caballus.CM000403.2                               21373054 36 +  39960074 T
e Equus_asinus.JREZ01000139.1                              3039120 36 -   4378816 T
e Eptesicus_fuscus.JH977646.1                             12576040 45 +  14770903 T
e Ellobius_talpinus.LOJH01026522.1                           10200 34 +     18970 T
e Ellobius_lutescens.LOEQ01008920.1                          28236 34 +    110024 T
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976 37 +     19438 T
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924 37 -    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139 37 -   1390856 T
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271 25 +  12879189 T
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549 38 -   1526836 T
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604 37 +     87169 T
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006 37 -     83289 T
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427 37 -      8242 T
e Condylura_cristata.JH655891.1                           35804984 37 +  53390261 T
e Colobus_polykomos.k141_1559707                              6362 37 -      6605 T
e Colobus_guereza.LG01                                      376350 37 - 200372422 T
e Colobus_angolensis.KN981557.1                             406473 37 -   2368649 T
e Chlorocebus_sabaeus.CM001947.1                            302019 37 - 135778131 T
e Chlorocebus_pygerythrus.k141_3063162                        7239 37 -     44032 T
e Chlorocebus_aethiops.ctg25                                340694 37 +  18827391 T
e Chiropotes_sagulatus.k141_1113111                           5818 37 +     34062 T
e Chiropotes_israelita.k141_313004                           40246 37 -    112038 T
e Chiropotes_albinasus.k141_1946120                           1561 37 +      5346 T
e Cheracebus_torquatus.k141_890198                           17175 37 +     39636 T
e Cheracebus_regulus.k141_471822                             17391 37 +    216457 T
e Cheracebus_lugens.k141_1179667                             17127 37 -     40346 T
e Cheracebus_lucifer.k141_2312002                             6714 37 -     32913 T
e Cheirogaleus_medius.k141_759766                             2852 36 -     15404 T
e Cheirogaleus_major.k141_666340                             28322 36 -     33796 T
e Cercopithecus_roloway.k141_3012935                         19797 37 +     36323 T
e Cercopithecus_pogonias.k141_6079                           22872 37 +     70610 T
e Cercopithecus_petaurista.k141_42573                         1353 37 +      8499 T
e Cercopithecus_nictitans.k141_2995370                       25200 37 -     32606 T
e Cercopithecus_neglectus.k141_858615                        29380 37 -     45857 T
e Cercopithecus_mona.ctg39                                  267919 37 +  21565898 T
e Cercopithecus_albogularis.ctg5                                  362211 37 -  39242232 T
e Cercopithecus_lowei.k141_2101310                            9612 37 -     25376 T
e Cercopithecus_hamlyni.k141_566925                          24903 37 -     34525 T
e Cercopithecus_diana.k141_132293                             9181 37 -     17524 T
e Cercopithecus_cephus.k141_4183004                           4991 37 +     20796 T
e Cercopithecus_ascanius.k141_3120866                        25022 30 -     40656 T
e Cercocebus_torquatus.k141_2159127                          41924 23 -    148725 T
e Cercocebus_lunulatus.k141_2779015                          41941 23 -     44860 T
e Cercocebus_chrysogaster.k141_1522556                       42108 23 +     47900 T
e Cercocebus_atys.KQ010504.1                                138368 23 -   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680 37 +     27315 T
e Cephalopachus_bancanus.k141_72622                           1235 37 -      1636 T
e Cebus_unicolor.k141_1654760                                64802 37 -     89041 T
e Cebus_olivaceus.k141_1404781                                5707 37 -     34880 T
e Cebus_albifrons.Contig27                                  368818 37 -  26074798 T
e Cebuella_pygmaea.k141_145798                               40615 37 +     53515 T
e Cebuella_niveiventris.k141_592277                           2729 37 -     12580 T
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094 36 -     39886 T
e Carlito_syrichta.NW_007259797.1                           268063 37 +    496798 T
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443 37 -     18408 T
e Callithrix_jacchus.pat_scaffold_3                      165451150 37 + 189096842 T
e Callithrix_geoffroyi.k119_473390                           16195 37 +     17162 T
e Callimico_goeldii.k141_1609886                              7497 29 -     13885 T
e Cacajao_melanocephalus.k141_619699                         18339 37 +    119600 T
e Cacajao_hosomi.k141_81245                                  18426 37 +     95584 T
e Cacajao_calvus.k141_89051                                  40900 37 -     91139 T
e Cacajao_ayresi.k141_96119                                   5606 37 +     28062 T
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889 36 -     19611 T
e Avahi_laniger.k141_2756659                                  3888 36 +     11645 T
e Ateles_paniscus.k141_866194                                20710 37 -     33135 T
e Ateles_marginatus.k141_970259                              46651 37 -     71267 T
e Ateles_geoffroyi_a.k141_1283730                              31280 37 +     44353 T
e Ateles_chamek.k141_615173                                   3727 37 -     28759 T
e Ateles_belzebuth.k141_1572163                               8590 37 +     48076 T
e Ateles_geoffroyi_b.tarseq_1536                               272423 37 +  21539123 T
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732 41 -     32367 T
e Aotus_vociferans.k141_944972                                6977 37 +      8415 T
e Aotus_trivirgatus.k141_192090                              21841 37 -     23494 T
e Aotus_nancymaae.KZ198451.1                                670199 37 +   5030052 T
e Aotus_griseimembra.k141_982342                             42186 37 +     43593 T
e Aotus_azarae.k141_118258                                   48439 37 -     65372 T
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387 37 -    412891 T
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624 37 +     42133 T
e Alouatta_puruensis.k141_251022                              6485 37 +     30854 T
e Alouatta_palliata.k141_638677                              44360 37 +     70886 T
e Alouatta_nigerrima.k141_376068                             38662 37 +     45454 T
e Alouatta_macconnelli.k141_361275                           21679 37 -     24835 T
e Alouatta_juara.k141_1687208                                40033 37 -     64179 T
e Alouatta_discolor.k141_2561099                             41595 37 +     55831 T
e Alouatta_caraya.k141_1109140                               42145 37 -     78289 T
e Alouatta_belzebul.k141_1011583                             69916 37 -     84148 T
e Allochrocebus_lhoesti.k141_441277                          41129 37 +     44087 T
e Allenopithecus_nigroviridis.k141_3755588                   45208 37 +     53615 T
e Allactaga_bullata.AllBul_scaffold_20030                    15727 23 -     61208 T
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313 37 +   1699592 T

a score=0.000000
s hg38.chrUn_KI270755v1                                       2230 51 +     36723 tctcct---tcacca-ccatagaattaggaggcttctgcagatatggctaaatct
s Gorilla_beringei.k141_3358147                               2592 54 -      8343 tcttctccttcaccc-ccataggattagatggattctgcagatacggctaagtct
i Gorilla_beringei.k141_3358147                          I 5 T 54
s Gorilla_gorilla.LT578336.1                                 68156 25 +  33314783 -----------------------------TGGATTCTGCA-ATATGGCTAAGTCT
i Gorilla_gorilla.LT578336.1                             C 0 T 25
s Pan_troglodytes.CM009242.2                               1469669 51 - 189151597 tctcct---tcacca-ccatagaattaggtggcttctgcagatacagctaaatct
i Pan_troglodytes.CM009242.2                             T 271 T 485
s Pongo_abelii.CM009266.2                                   175140 39 - 189387572 ----------------CCATagaattaggtggcttctgcagatacggctaagtCT
i Pongo_abelii.CM009266.2                                I 12 T 39
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991 35 -     33621 T
e Petromus_typicus.PetTyp_scaffold_17301                     29661 35 -     56120 T
e Perognathus_longimembris.PerPac_flattened_line_28053       37455 83 +     38305 T
e Octodon_degus.JH651603.1                                11044981 35 -  11899542 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949 35 +    143317 T
e Heterocephalus_glaber.JH602082.1                         1924707 35 -  22651954 T
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606 34 +     14636 T
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201 82 -     10735 T
e Dipodomys_ordii.KN672350.1                              18948254 82 -  37912305 T
e Dinomys_branickii.DinBra_scaffold_10381                    96011 35 -    115145 T
e Cuniculus_paca.CunPac_flattened_line_7025                   1279 35 +     36344 T
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627 35 +     50838 T
e Cavia_tschudii.CavTsc_scaffold_23560                       60200 35 -     66877 T
e Cavia_porcellus.DS562891.1                               4997099 35 +  23407841 T
e Cavia_aperea.AVPZ01000300.1                              4993657 35 +  23392119 T
e Microgale_talazaci.MicTal_scaffold_6613                    41667 37 +    145209 T
e Echinops_telfairi.JH980293.1                            62851351 40 - 111700974 T
e Orycteropus_afer.OryAfe_flattened_line_171931              11056 37 -     14239 T
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408 29 -  20541912 T
e Pygathrix_nigripes_a.k141_215492                              5211 37 +     72585 T
e Pygathrix_nigripes_b.ctg100                                  150834 37 -   7812017 T
e Pygathrix_cinerea.k141_1153803                             24341 37 +     91421 T
e Callibella_humilis.k141_1233062                             7834 37 +     18648 T
e Perodicticus_potto.k141_1854441                            15139 37 -     24908 T
e Perodicticus_ibeanus.k141_1921260                          22769 37 +     31479 T
e Otolemur_garnettii.GL873799.1                             349529 37 +   1103335 T
e Otolemur_crassicaudatus.k141_649260                        36515 37 -     51505 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929 37 - 199412804 T
e Nycticebus_coucang.k141_8166032                             2064 37 +      2758 T
e Nycticebus_bengalensis.LG01                             93632675 37 + 196305487 T
e Loris_tardigradus.ctg83                                  5041044 37 -   6120653 T
e Loris_lydekkerianus.k141_2031736                            7384 37 +     19643 T
e Galagoides_demidoff.k141_561628                            16986 37 -     32986 T
e Galago_senegalensis.k141_991736                             4930 36 +     22493 T
e Galago_moholi.ctg3793                                     121389 36 -    137831 T
e Arctocebus_calabarensis.k141_1364444                       17350 37 -     45910 T
e Allochrocebus_solatus.k141_3554717                         15445 27 +     32033 T
e Allochrocebus_preussi.k141_1993939                         13769 28 -     21945 T
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503 37 -     31044 T
e Dasypus_novemcinctus.JH564415.1                          2107833 37 -   2246927 T
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495 37 -     19938 T
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743 37 +      5315 T
e Tupaia_tana.TupTan_flattened_line_394                       5859 37 -     70247 T
e Tupaia_chinensis.KB320699.1                              1831343 37 -   4065304 T
e Zalophus_californianus.ZalCal_flattened_line_17732         26391 37 -     86975 T
e Vulpes_lagopus.VulLag_flattened_line_12041                102738 37 -    112863 T
e Ursus_maritimus.KK499267.1                                179344 37 +   5085361 T
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224 37 -     97271 T
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227 37 -     18639 T
e Otocyon_megalotis.JAEUCK010005147.1                        37014 37 +    559221 T
e Odobenus_rosmarus.KB229312.1                             1449171 37 +   2017862 T
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975 37 +   9404916 T
e Neomonachus_schauinslandi.NINY01007730.1                11466383 37 -  31847680 T
e Mustela_putorius.JH418006.1                             14352449 37 +  14710649 T
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996 37 +     27589 T
e Mellivora_capensis.MelCap_flattened_line_19308             23509 37 -     74585 T
e Lycaon_pictus.CM007581.1                                41612373 37 +  59628241 T
e Leptonychotes_weddellii.KB714746.1                        810986 37 -   3914936 T
e Enhydra_lutris.KZ291758.1                               24913636 37 +  41312741 T
e Canis_lupus_orion.HG994398.1                            45104799 37 -  63665305 T
e Canis_lupus_familiaris.chr16                            41613218 37 +  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                          220083 37 +   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740 37 -     23171 T
e CanFam4.chr16                                           42503104 37 +  60362399 T
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672 37 -     15198 T
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834 37 +  29979442 T
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048 28 +      2695 T
e Xerus_inauris.XerIna_scaffold_2302                        171803 34 -    224448 T
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Varecia_variegata.k141_289850                              21738 36 -    147434 T
e Varecia_rubra.k141_787544                                  22831 36 -     30710 T
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988 37 -    105689 T
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579 37 +     59866 T
e Trachypithecus_phayrei.ctg124                             252848 37 -   6242583 T
e Trachypithecus_obscurus.k141_848057                         7609 37 -     13050 T
e Trachypithecus_melamera.k141_591572                          615 37 -      6147 T
e Trachypithecus_leucocephalus.k141_96450                     7187 37 +     22490 T
e Trachypithecus_laotum.k141_928651                          25744 37 -     63452 T
e Trachypithecus_hatinhensis.k141_31479                      27707 37 -     64340 T
e Trachypithecus_germaini.k141_57262                          6693 37 -     28527 T
e Trachypithecus_geei.k141_1001272                           25885 37 +     46913 T
e Trachypithecus_francoisi.k141_1453105                      25768 37 -     62838 T
e Trachypithecus_cristatus.k141_180416                       17543 37 +     25722 T
e Trachypithecus_crepusculus.k141_539312                     30906 37 -     78344 T
e Trachypithecus_auratus.k141_1189070                        18222 37 +     26378 T
e Tonatia_saurophila.TonSau_scaffold_294                    477420 37 -    610378 T
e Theropithecus_gelada.CM009954.1                           350535 23 - 186847797 T
e Tarsius_wallacei.k141_226975                                4794 37 +     20590 T
e Tarsius_lariang.k141_1780720                                4755 37 +      6850 T
e Tapirus_terrestris.TapTer_scaffold_755                    103056 37 -    539355 T
e Tapirus_indicus.TapInd_scaffold_7432                      189100 37 +    199430 T
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382 36 +      5583 T
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377 18 +     22964 T
e Symphalangus_syndactylus.tarseq_199                       388305 37 +   1523678 T
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274 33 +    196729 T
e Spermophilus_dauricus.KZ294078.1                         1866045 33 +   3870691 T
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078 38 -   1910179 T
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000 35 +     77746 T
e Semnopithecus_vetulus.k141_244474                          26080 37 -     48123 T
e Semnopithecus_schistaceus.k141_1432920                     23011 37 -     29113 T
e Semnopithecus_priam.k141_714795                            20331 37 -     42441 T
e Semnopithecus_johnii.k141_843753                           12673 37 -     45317 T
e Semnopithecus_hypoleucos.k141_1910531                      26177 37 +     58920 T
e Semnopithecus_entellus.k141_158471                         22658 37 +     27374 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762 37 +    313613 T
e Sapajus_macrocephalus.k141_796559                           5632 37 +     21866 T
e Sapajus_apella.ctg103                                     236042 37 +   5703754 T
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954 37 -      4301 T
e Saguinus_mystax.k141_8077960                                1588 37 +      5979 T
e Saguinus_midas.LG03                                       388907 37 - 209938924 T
e Saguinus_labiatus.k141_1571581                              1785 37 -      2099 T
e Saguinus_inustus.k141_2469308                               1640 37 +      5932 T
e Saguinus_imperator.k141_1898058                             1586 37 +      5971 T
e Saguinus_geoffroyi.k141_3779887                             1567 37 +      6077 T
e Saguinus_bicolor.k141_1429097                               1559 37 +     27962 T
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553 37 -    116970 T
e Rhinopithecus_strykeri.ctg102                             233778 36 -   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                    104119518 36 + 195417433 T
e Rhinopithecus_bieti.k119_221883                            26170 36 +     27361 T
e Rhinolophus_sinicus.LVEH01000134.1                       2911225 37 +   3329780 T
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575 37 +  38429054 T
e Pteropus_vampyrus.KN525825.1                             3535136 37 -   4952924 T
e Pteropus_alecto.KB030862.1                               5838570 37 -  28871421 T
e Pteronotus_parnellii.KE847780.1                            49602 37 -     66298 T
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969 36 +     35169 T
e Propithecus_tattersalli.k141_1127767                       92332 36 -     98465 T
e Propithecus_perrieri.k141_1496898                          32061 36 +     46564 T
e Propithecus_edwardsi.k141_635656                            5736 36 -     30655 T
e Propithecus_diadema.k141_153680                             2000 36 -     11706 T
e Propithecus_coronatus.k141_209299                           1403 36 -      7103 T
e Propithecus_coquerelli.NW_012148875.1                    1563767 36 -   2598838 T
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145 37 -     80239 T
e Presbytis_comata.k141_1230337                              24950 37 +     69807 T
e Pongo_pygmaeus.ctg66                                      189970 115 -   9816681 T
e Plecturocebus_moloch.k141_1031110                          41783 37 +     89403 T
e Plecturocebus_miltoni.k141_349282                          40315 37 -     90634 T
e Plecturocebus_hoffmannsi.k141_3303950                      12399 37 -     67232 T
e Plecturocebus_grovesi.k141_2013005                          5463 37 -     60166 T
e Plecturocebus_dubius.k141_1058799                          40420 37 +     87928 T
e Plecturocebus_cupreus.k141_2351393                          5466 37 -     39403 T
e Plecturocebus_cinerascens.k141_1164729                     40767 37 -     88961 T
e Plecturocebus_caligatus.k141_1382851                       40374 37 -     87950 T
e Plecturocebus_brunneus.k141_862875                           970 37 -      9282 T
e Plecturocebus_bernhardi.k141_2549090                        5885 37 +     39866 T
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454 37 +     51125 T
e Pithecia_pithecia.tarseq_165                              554439 27 -   4542175 T
e Pithecia_pissinattii.k141_878371                           29470 37 +     51148 T
e Pithecia_mittermeieri.k141_1280039                         29707 37 +     63561 T
e Pithecia_hirsuta.k141_640380                               29431 37 +     58159 T
e Pithecia_chrysocephala.k141_785207                          3692 27 -     25401 T
e Pithecia_albicans.k141_1239476                             62596 37 +    207309 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564 46 +     22231 T
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453 37 +      5735 T
e Piliocolobus_kirkii.k141_579682                            44775 37 +     45295 T
e Piliocolobus_gordonorum.k141_905727                        62176 37 -     63152 T
e Piliocolobus_badius.k141_2495623                            6468 37 +      7560 T
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434 36 +  18517816 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589 37 +     78924 T
e Papio_ursinus.k141_2278143                                 19614 23 -     23640 T
e Papio_papio.k141_799093                                    12804 23 +     16796 T
e Papio_kindae.k141_2214839                                  19668 23 -     27687 T
e Papio_hamadryas.Contig39                                  288052 23 -  20919399 T
e Papio_cynocephalus.k141_1507553                             7013 23 +     21308 T
e Papio_anubis.CM001495.2                                   240549 23 - 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975 37 +   8748460 T
e Panthera_pardus.KV860321.1                              18459255 37 -  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                   21929 37 -    230217 T
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789 37 +    107918 T
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957 39 -    140218 T
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447 37 -     54323 T
e Nomascus_siki_b.tarseq_93                            8411333 37 -  22158432 T
e Nomascus_gabriellae.k141_57920                             13049 37 +     22201 T
e Nomascus_concolor.k141_735679                               7164 37 -     16345 T
e Nomascus_annamensis.k141_1771965                           51069 37 -    132029 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125173 31 -    149072 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317 37 +     34575 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264 36 +    130748 T
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625 45 +   4330536 T
e Myotis_davidii.KB100139.1                                4384803 45 +   6019432 T
e Myotis_brandtii.KE162005.1                               9790404 45 +  10118263 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388 45 +     47283 T
e Mungos_mungo.MunMun_flattened_line_18455                   15863 33 -     63510 T
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536 37 +    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50085 18 -     62432 T
e Miopithecus_ogouensis.k141_1534655                         19736 37 -     27822 T
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357 35 +    200668 T
e Microcebus_murinus.CM007674.1                           74982290 36 +  93316391 T
e Mico_schneideri.k141_1877700                                     16341 37 -     26561 T
e Mico_humeralifer.k141_1180625                               8390 37 -     12984 T
e Mico_argentatus.k141_582562                                 7606 37 +     17804 T
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130 34 +    207569 T
e Marmota_marmota.CZRN01000018.1                           7498675 33 +  40650429 T
e Manis_pentadactyla.KN006162.1                             218512 37 +    317179 T
e Manis_javanica.JSZB01003497.1                             671221 37 -    737560 T
e Mandrillus_sphinx.Contig270                               354541 23 -    752769 T
e Mandrillus_leucophaeus.scaffold280                        319709 23 +  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942 37 -    270270 T
e Macaca_tonkeana.k141_339739                                  209 17 +     17132 T
e Macaca_thibetana.k99_41370                                 19612 23 +     21031 T
e Macaca_silenus.Contig273                                  268431 37 +    668171 T
e Macaca_siberu.k141_2185972                                 42498 70 +     59329 T
e Macaca_radiata.k141_3557992                                22677 37 +     24253 T
e Macaca_nigra.k141_2818840                                  46022 37 -     62418 T
e Macaca_nemestrina.KQ007038.1                              396858 37 +  25927173 T
e Macaca_mulatta.NC_041758.1                                412635 37 - 187317192 T
e Macaca_maura.k141_1103459                                  43467 70 +     51645 T
e Macaca_leonina.k141_321385                                 33696 37 -     50087 T
e Macaca_fuscata.k119_546792                                 22506 37 +     30527 T
e Macaca_fascicularis.k141_1397292                           19657 27 -     24934 T
e Macaca_cyclopis.k119_263443                                22554 23 +     30207 T
e Macaca_assamensis.Contig5                                 370299 37 -  60120075 T
e Macaca_arctoides.k141_1757516                              42638 23 -     61512 T
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321 23 -   1826925 T
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679 36 +     16388 T
e Lepilemur_ruficaudatus.k141_330196                          6685 36 +     24756 T
e Lepilemur_dorsalis.k141_387009                              6675 36 +     31569 T
e Lepilemur_ankaranensis.k141_567626                          6678 36 +     29618 T
e Leontopithecus_rosalia.k141_349454                          9242 37 -     12945 T
e Leontopithecus_chrysomelas.k141_1327670                     7861 37 -     11567 T
e Leontocebus_nigricollis.k141_3905062                        1228 37 -      5717 T
e Leontocebus_illigeri.k141_2951200                           1597 37 +      5940 T
e Leontocebus_fuscicollis.k141_2994775                        1646 37 -     13097 T
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517 45 -     65777 T
e Lagothrix_lagothricha.k141_246028                          40966 37 +    110728 T
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885 23 +   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Indri_indri.k141_4600452                                    1394 44 -      1527 T
e Ictidomys_tridecemlineatus.JH393364.1                     384476 33 +   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837 37 +  11177569 T
e Hylobates_pileatus_b.LG02                                       2049482 37 + 191637585 T
e Hylobates_klossii.k141_738755                              10363 37 +     55766 T
e Hylobates_agilis.k141_1155965                               3180 37 +     12352 T
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590 37 +     83186 T
e Hoolock_leuconedys.ctg274                                    140145 37 -    630532 T
e Hipposideros_galeritus.HipGal_scaffold_23202               47193 37 +     49977 T
e Hipposideros_armiger.JXIK01000431.1                      1547877 37 -   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109 33 -    327341 T
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737 37 +     18121 T
e Felis_nigripes.FelNig_flattened_line_31944                 25108 37 -     30238 T
e Felis_catus_fca126.CM031415.1                          185113760 37 - 205367284 T
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Erythrocebus_patas.Contig38                               260217 37 +  21539334 T
e Equus_przewalskii.KK951119.1                              409840 36 -    498745 T
e Equus_caballus.CM000403.2                               21373054 36 +  39960074 T
e Equus_asinus.JREZ01000139.1                              3039120 36 -   4378816 T
e Eptesicus_fuscus.JH977646.1                             12576040 45 +  14770903 T
e Ellobius_talpinus.LOJH01026522.1                           10200 34 +     18970 T
e Ellobius_lutescens.LOEQ01008920.1                          28236 34 +    110024 T
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976 37 +     19438 T
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924 37 -    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139 37 -   1390856 T
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271 25 +  12879189 T
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549 38 -   1526836 T
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604 37 +     87169 T
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006 37 -     83289 T
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427 37 -      8242 T
e Condylura_cristata.JH655891.1                           35804984 37 +  53390261 T
e Colobus_polykomos.k141_1559707                              6362 37 -      6605 T
e Colobus_guereza.LG01                                      376350 37 - 200372422 T
e Colobus_angolensis.KN981557.1                             406473 37 -   2368649 T
e Chlorocebus_sabaeus.CM001947.1                            302019 37 - 135778131 T
e Chlorocebus_pygerythrus.k141_3063162                        7239 37 -     44032 T
e Chlorocebus_aethiops.ctg25                                340694 37 +  18827391 T
e Chiropotes_sagulatus.k141_1113111                           5818 37 +     34062 T
e Chiropotes_israelita.k141_313004                           40246 37 -    112038 T
e Chiropotes_albinasus.k141_1946120                           1561 37 +      5346 T
e Cheracebus_torquatus.k141_890198                           17175 37 +     39636 T
e Cheracebus_regulus.k141_471822                             17391 37 +    216457 T
e Cheracebus_lugens.k141_1179667                             17127 37 -     40346 T
e Cheracebus_lucifer.k141_2312002                             6714 37 -     32913 T
e Cheirogaleus_medius.k141_759766                             2852 36 -     15404 T
e Cheirogaleus_major.k141_666340                             28322 36 -     33796 T
e Cercopithecus_roloway.k141_3012935                         19797 37 +     36323 T
e Cercopithecus_pogonias.k141_6079                           22872 37 +     70610 T
e Cercopithecus_petaurista.k141_42573                         1353 37 +      8499 T
e Cercopithecus_nictitans.k141_2995370                       25200 37 -     32606 T
e Cercopithecus_neglectus.k141_858615                        29380 37 -     45857 T
e Cercopithecus_mona.ctg39                                  267919 37 +  21565898 T
e Cercopithecus_albogularis.ctg5                                  362211 37 -  39242232 T
e Cercopithecus_lowei.k141_2101310                            9612 37 -     25376 T
e Cercopithecus_hamlyni.k141_566925                          24903 37 -     34525 T
e Cercopithecus_diana.k141_132293                             9181 37 -     17524 T
e Cercopithecus_cephus.k141_4183004                           4991 37 +     20796 T
e Cercopithecus_ascanius.k141_3120866                        25022 30 -     40656 T
e Cercocebus_torquatus.k141_2159127                          41924 23 -    148725 T
e Cercocebus_lunulatus.k141_2779015                          41941 23 -     44860 T
e Cercocebus_chrysogaster.k141_1522556                       42108 23 +     47900 T
e Cercocebus_atys.KQ010504.1                                138368 23 -   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680 37 +     27315 T
e Cephalopachus_bancanus.k141_72622                           1235 37 -      1636 T
e Cebus_unicolor.k141_1654760                                64802 37 -     89041 T
e Cebus_olivaceus.k141_1404781                                5707 37 -     34880 T
e Cebus_albifrons.Contig27                                  368818 37 -  26074798 T
e Cebuella_pygmaea.k141_145798                               40615 37 +     53515 T
e Cebuella_niveiventris.k141_592277                           2729 37 -     12580 T
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094 36 -     39886 T
e Carlito_syrichta.NW_007259797.1                           268063 37 +    496798 T
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443 37 -     18408 T
e Callithrix_jacchus.pat_scaffold_3                      165451150 37 + 189096842 T
e Callithrix_geoffroyi.k119_473390                           16195 37 +     17162 T
e Callimico_goeldii.k141_1609886                              7497 29 -     13885 T
e Cacajao_melanocephalus.k141_619699                         18339 37 +    119600 T
e Cacajao_hosomi.k141_81245                                  18426 37 +     95584 T
e Cacajao_calvus.k141_89051                                  40900 37 -     91139 T
e Cacajao_ayresi.k141_96119                                   5606 37 +     28062 T
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889 36 -     19611 T
e Avahi_laniger.k141_2756659                                  3888 36 +     11645 T
e Ateles_paniscus.k141_866194                                20710 37 -     33135 T
e Ateles_marginatus.k141_970259                              46651 37 -     71267 T
e Ateles_geoffroyi_a.k141_1283730                              31280 37 +     44353 T
e Ateles_chamek.k141_615173                                   3727 37 -     28759 T
e Ateles_belzebuth.k141_1572163                               8590 37 +     48076 T
e Ateles_geoffroyi_b.tarseq_1536                               272423 37 +  21539123 T
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732 41 -     32367 T
e Aotus_vociferans.k141_944972                                6977 37 +      8415 T
e Aotus_trivirgatus.k141_192090                              21841 37 -     23494 T
e Aotus_nancymaae.KZ198451.1                                670199 37 +   5030052 T
e Aotus_griseimembra.k141_982342                             42186 37 +     43593 T
e Aotus_azarae.k141_118258                                   48439 37 -     65372 T
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387 37 -    412891 T
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624 37 +     42133 T
e Alouatta_puruensis.k141_251022                              6485 37 +     30854 T
e Alouatta_palliata.k141_638677                              44360 37 +     70886 T
e Alouatta_nigerrima.k141_376068                             38662 37 +     45454 T
e Alouatta_macconnelli.k141_361275                           21679 37 -     24835 T
e Alouatta_juara.k141_1687208                                40033 37 -     64179 T
e Alouatta_discolor.k141_2561099                             41595 37 +     55831 T
e Alouatta_caraya.k141_1109140                               42145 37 -     78289 T
e Alouatta_belzebul.k141_1011583                             69916 37 -     84148 T
e Allochrocebus_lhoesti.k141_441277                          41129 37 +     44087 T
e Allenopithecus_nigroviridis.k141_3755588                   45208 37 +     53615 T
e Allactaga_bullata.AllBul_scaffold_20030                    15727 23 -     61208 T
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313 37 +   1699592 T

a score=0.000000
s hg38.chrUn_KI270755v1                                       2281 16 +     36723 tctcct---tcacca-ccgt
s Gorilla_beringei.k141_3358147                               2592 19 -      8343 tcttctccttcaccc-ccat
i Gorilla_beringei.k141_3358147                          T 54 C 0
s Pan_troglodytes.NBAG03001968.1                               696 17 -     50635 tctcct---tcaccacccat
i Pan_troglodytes.NBAG03001968.1                         n 485 T 11
s Pongo_abelii.CM009266.2                                   175140  4 - 189387572 ----------------CCAT
i Pongo_abelii.CM009266.2                                T 39 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991 35 -     33621 T
e Petromus_typicus.PetTyp_scaffold_17301                     29661 35 -     56120 T
e Perognathus_longimembris.PerPac_flattened_line_28053       37455 83 +     38305 T
e Octodon_degus.JH651603.1                                11044981 35 -  11899542 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949 35 +    143317 T
e Heterocephalus_glaber.JH602082.1                         1924707 35 -  22651954 T
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606 34 +     14636 T
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201 82 -     10735 T
e Dipodomys_ordii.KN672350.1                              18948254 82 -  37912305 T
e Dinomys_branickii.DinBra_scaffold_10381                    96011 35 -    115145 T
e Cuniculus_paca.CunPac_flattened_line_7025                   1279 35 +     36344 T
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627 35 +     50838 T
e Cavia_tschudii.CavTsc_scaffold_23560                       60200 35 -     66877 T
e Cavia_porcellus.DS562891.1                               4997099 35 +  23407841 T
e Cavia_aperea.AVPZ01000300.1                              4993657 35 +  23392119 T
e Microgale_talazaci.MicTal_scaffold_6613                    41667 37 +    145209 T
e Echinops_telfairi.JH980293.1                            62851351 40 - 111700974 T
e Orycteropus_afer.OryAfe_flattened_line_171931              11056 37 -     14239 T
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408 29 -  20541912 T
e Pygathrix_nigripes_a.k141_215492                              5211 37 +     72585 T
e Pygathrix_nigripes_b.ctg100                                  150834 37 -   7812017 T
e Pygathrix_cinerea.k141_1153803                             24341 37 +     91421 T
e Callibella_humilis.k141_1233062                             7834 37 +     18648 T
e Perodicticus_potto.k141_1854441                            15139 37 -     24908 T
e Perodicticus_ibeanus.k141_1921260                          22769 37 +     31479 T
e Otolemur_garnettii.GL873799.1                             349529 37 +   1103335 T
e Otolemur_crassicaudatus.k141_649260                        36515 37 -     51505 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929 37 - 199412804 T
e Nycticebus_coucang.k141_8166032                             2064 37 +      2758 T
e Nycticebus_bengalensis.LG01                             93632675 37 + 196305487 T
e Loris_tardigradus.ctg83                                  5041044 37 -   6120653 T
e Loris_lydekkerianus.k141_2031736                            7384 37 +     19643 T
e Galagoides_demidoff.k141_561628                            16986 37 -     32986 T
e Galago_senegalensis.k141_991736                             4930 36 +     22493 T
e Galago_moholi.ctg3793                                     121389 36 -    137831 T
e Arctocebus_calabarensis.k141_1364444                       17350 37 -     45910 T
e Allochrocebus_solatus.k141_3554717                         15445 27 +     32033 T
e Allochrocebus_preussi.k141_1993939                         13769 28 -     21945 T
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503 37 -     31044 T
e Dasypus_novemcinctus.JH564415.1                          2107833 37 -   2246927 T
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495 37 -     19938 T
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743 37 +      5315 T
e Tupaia_tana.TupTan_flattened_line_394                       5859 37 -     70247 T
e Tupaia_chinensis.KB320699.1                              1831343 37 -   4065304 T
e Zalophus_californianus.ZalCal_flattened_line_17732         26391 37 -     86975 T
e Vulpes_lagopus.VulLag_flattened_line_12041                102738 37 -    112863 T
e Ursus_maritimus.KK499267.1                                179344 37 +   5085361 T
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224 37 -     97271 T
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227 37 -     18639 T
e Otocyon_megalotis.JAEUCK010005147.1                        37014 37 +    559221 T
e Odobenus_rosmarus.KB229312.1                             1449171 37 +   2017862 T
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975 37 +   9404916 T
e Neomonachus_schauinslandi.NINY01007730.1                11466383 37 -  31847680 T
e Mustela_putorius.JH418006.1                             14352449 37 +  14710649 T
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996 37 +     27589 T
e Mellivora_capensis.MelCap_flattened_line_19308             23509 37 -     74585 T
e Lycaon_pictus.CM007581.1                                41612373 37 +  59628241 T
e Leptonychotes_weddellii.KB714746.1                        810986 37 -   3914936 T
e Enhydra_lutris.KZ291758.1                               24913636 37 +  41312741 T
e Canis_lupus_orion.HG994398.1                            45104799 37 -  63665305 T
e Canis_lupus_familiaris.chr16                            41613218 37 +  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                          220083 37 +   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740 37 -     23171 T
e CanFam4.chr16                                           42503104 37 +  60362399 T
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672 37 -     15198 T
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834 37 +  29979442 T
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048 28 +      2695 T
e Xerus_inauris.XerIna_scaffold_2302                        171803 34 -    224448 T
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Varecia_variegata.k141_289850                              21738 36 -    147434 T
e Varecia_rubra.k141_787544                                  22831 36 -     30710 T
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988 37 -    105689 T
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579 37 +     59866 T
e Trachypithecus_phayrei.ctg124                             252848 37 -   6242583 T
e Trachypithecus_obscurus.k141_848057                         7609 37 -     13050 T
e Trachypithecus_melamera.k141_591572                          615 37 -      6147 T
e Trachypithecus_leucocephalus.k141_96450                     7187 37 +     22490 T
e Trachypithecus_laotum.k141_928651                          25744 37 -     63452 T
e Trachypithecus_hatinhensis.k141_31479                      27707 37 -     64340 T
e Trachypithecus_germaini.k141_57262                          6693 37 -     28527 T
e Trachypithecus_geei.k141_1001272                           25885 37 +     46913 T
e Trachypithecus_francoisi.k141_1453105                      25768 37 -     62838 T
e Trachypithecus_cristatus.k141_180416                       17543 37 +     25722 T
e Trachypithecus_crepusculus.k141_539312                     30906 37 -     78344 T
e Trachypithecus_auratus.k141_1189070                        18222 37 +     26378 T
e Tonatia_saurophila.TonSau_scaffold_294                    477420 37 -    610378 T
e Theropithecus_gelada.CM009954.1                           350535 23 - 186847797 T
e Tarsius_wallacei.k141_226975                                4794 37 +     20590 T
e Tarsius_lariang.k141_1780720                                4755 37 +      6850 T
e Tapirus_terrestris.TapTer_scaffold_755                    103056 37 -    539355 T
e Tapirus_indicus.TapInd_scaffold_7432                      189100 37 +    199430 T
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382 36 +      5583 T
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377 18 +     22964 T
e Symphalangus_syndactylus.tarseq_199                       388305 37 +   1523678 T
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274 33 +    196729 T
e Spermophilus_dauricus.KZ294078.1                         1866045 33 +   3870691 T
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078 38 -   1910179 T
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000 35 +     77746 T
e Semnopithecus_vetulus.k141_244474                          26080 37 -     48123 T
e Semnopithecus_schistaceus.k141_1432920                     23011 37 -     29113 T
e Semnopithecus_priam.k141_714795                            20331 37 -     42441 T
e Semnopithecus_johnii.k141_843753                           12673 37 -     45317 T
e Semnopithecus_hypoleucos.k141_1910531                      26177 37 +     58920 T
e Semnopithecus_entellus.k141_158471                         22658 37 +     27374 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762 37 +    313613 T
e Sapajus_macrocephalus.k141_796559                           5632 37 +     21866 T
e Sapajus_apella.ctg103                                     236042 37 +   5703754 T
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954 37 -      4301 T
e Saguinus_mystax.k141_8077960                                1588 37 +      5979 T
e Saguinus_midas.LG03                                       388907 37 - 209938924 T
e Saguinus_labiatus.k141_1571581                              1785 37 -      2099 T
e Saguinus_inustus.k141_2469308                               1640 37 +      5932 T
e Saguinus_imperator.k141_1898058                             1586 37 +      5971 T
e Saguinus_geoffroyi.k141_3779887                             1567 37 +      6077 T
e Saguinus_bicolor.k141_1429097                               1559 37 +     27962 T
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553 37 -    116970 T
e Rhinopithecus_strykeri.ctg102                             233778 36 -   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                    104119518 36 + 195417433 T
e Rhinopithecus_bieti.k119_221883                            26170 36 +     27361 T
e Rhinolophus_sinicus.LVEH01000134.1                       2911225 37 +   3329780 T
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575 37 +  38429054 T
e Pteropus_vampyrus.KN525825.1                             3535136 37 -   4952924 T
e Pteropus_alecto.KB030862.1                               5838570 37 -  28871421 T
e Pteronotus_parnellii.KE847780.1                            49602 37 -     66298 T
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969 36 +     35169 T
e Propithecus_tattersalli.k141_1127767                       92332 36 -     98465 T
e Propithecus_perrieri.k141_1496898                          32061 36 +     46564 T
e Propithecus_edwardsi.k141_635656                            5736 36 -     30655 T
e Propithecus_diadema.k141_153680                             2000 36 -     11706 T
e Propithecus_coronatus.k141_209299                           1403 36 -      7103 T
e Propithecus_coquerelli.NW_012148875.1                    1563767 36 -   2598838 T
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145 37 -     80239 T
e Presbytis_comata.k141_1230337                              24950 37 +     69807 T
e Pongo_pygmaeus.ctg66                                      189970 115 -   9816681 T
e Plecturocebus_moloch.k141_1031110                          41783 37 +     89403 T
e Plecturocebus_miltoni.k141_349282                          40315 37 -     90634 T
e Plecturocebus_hoffmannsi.k141_3303950                      12399 37 -     67232 T
e Plecturocebus_grovesi.k141_2013005                          5463 37 -     60166 T
e Plecturocebus_dubius.k141_1058799                          40420 37 +     87928 T
e Plecturocebus_cupreus.k141_2351393                          5466 37 -     39403 T
e Plecturocebus_cinerascens.k141_1164729                     40767 37 -     88961 T
e Plecturocebus_caligatus.k141_1382851                       40374 37 -     87950 T
e Plecturocebus_brunneus.k141_862875                           970 37 -      9282 T
e Plecturocebus_bernhardi.k141_2549090                        5885 37 +     39866 T
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454 37 +     51125 T
e Pithecia_pithecia.tarseq_165                              554439 27 -   4542175 T
e Pithecia_pissinattii.k141_878371                           29470 37 +     51148 T
e Pithecia_mittermeieri.k141_1280039                         29707 37 +     63561 T
e Pithecia_hirsuta.k141_640380                               29431 37 +     58159 T
e Pithecia_chrysocephala.k141_785207                          3692 27 -     25401 T
e Pithecia_albicans.k141_1239476                             62596 37 +    207309 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564 46 +     22231 T
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453 37 +      5735 T
e Piliocolobus_kirkii.k141_579682                            44775 37 +     45295 T
e Piliocolobus_gordonorum.k141_905727                        62176 37 -     63152 T
e Piliocolobus_badius.k141_2495623                            6468 37 +      7560 T
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434 36 +  18517816 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589 37 +     78924 T
e Papio_ursinus.k141_2278143                                 19614 23 -     23640 T
e Papio_papio.k141_799093                                    12804 23 +     16796 T
e Papio_kindae.k141_2214839                                  19668 23 -     27687 T
e Papio_hamadryas.Contig39                                  288052 23 -  20919399 T
e Papio_cynocephalus.k141_1507553                             7013 23 +     21308 T
e Papio_anubis.CM001495.2                                   240549 23 - 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975 37 +   8748460 T
e Panthera_pardus.KV860321.1                              18459255 37 -  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                   21929 37 -    230217 T
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789 37 +    107918 T
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957 39 -    140218 T
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447 37 -     54323 T
e Nomascus_siki_b.tarseq_93                            8411333 37 -  22158432 T
e Nomascus_gabriellae.k141_57920                             13049 37 +     22201 T
e Nomascus_concolor.k141_735679                               7164 37 -     16345 T
e Nomascus_annamensis.k141_1771965                           51069 37 -    132029 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125173 31 -    149072 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317 37 +     34575 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264 36 +    130748 T
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625 45 +   4330536 T
e Myotis_davidii.KB100139.1                                4384803 45 +   6019432 T
e Myotis_brandtii.KE162005.1                               9790404 45 +  10118263 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388 45 +     47283 T
e Mungos_mungo.MunMun_flattened_line_18455                   15863 33 -     63510 T
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536 37 +    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50085 18 -     62432 T
e Miopithecus_ogouensis.k141_1534655                         19736 37 -     27822 T
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357 35 +    200668 T
e Microcebus_murinus.CM007674.1                           74982290 36 +  93316391 T
e Mico_schneideri.k141_1877700                                     16341 37 -     26561 T
e Mico_humeralifer.k141_1180625                               8390 37 -     12984 T
e Mico_argentatus.k141_582562                                 7606 37 +     17804 T
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130 34 +    207569 T
e Marmota_marmota.CZRN01000018.1                           7498675 33 +  40650429 T
e Manis_pentadactyla.KN006162.1                             218512 37 +    317179 T
e Manis_javanica.JSZB01003497.1                             671221 37 -    737560 T
e Mandrillus_sphinx.Contig270                               354541 23 -    752769 T
e Mandrillus_leucophaeus.scaffold280                        319709 23 +  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942 37 -    270270 T
e Macaca_tonkeana.k141_339739                                  209 17 +     17132 T
e Macaca_thibetana.k99_41370                                 19612 23 +     21031 T
e Macaca_silenus.Contig273                                  268431 37 +    668171 T
e Macaca_siberu.k141_2185972                                 42498 70 +     59329 T
e Macaca_radiata.k141_3557992                                22677 37 +     24253 T
e Macaca_nigra.k141_2818840                                  46022 37 -     62418 T
e Macaca_nemestrina.KQ007038.1                              396858 37 +  25927173 T
e Macaca_mulatta.NC_041758.1                                412635 37 - 187317192 T
e Macaca_maura.k141_1103459                                  43467 70 +     51645 T
e Macaca_leonina.k141_321385                                 33696 37 -     50087 T
e Macaca_fuscata.k119_546792                                 22506 37 +     30527 T
e Macaca_fascicularis.k141_1397292                           19657 27 -     24934 T
e Macaca_cyclopis.k119_263443                                22554 23 +     30207 T
e Macaca_assamensis.Contig5                                 370299 37 -  60120075 T
e Macaca_arctoides.k141_1757516                              42638 23 -     61512 T
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321 23 -   1826925 T
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679 36 +     16388 T
e Lepilemur_ruficaudatus.k141_330196                          6685 36 +     24756 T
e Lepilemur_dorsalis.k141_387009                              6675 36 +     31569 T
e Lepilemur_ankaranensis.k141_567626                          6678 36 +     29618 T
e Leontopithecus_rosalia.k141_349454                          9242 37 -     12945 T
e Leontopithecus_chrysomelas.k141_1327670                     7861 37 -     11567 T
e Leontocebus_nigricollis.k141_3905062                        1228 37 -      5717 T
e Leontocebus_illigeri.k141_2951200                           1597 37 +      5940 T
e Leontocebus_fuscicollis.k141_2994775                        1646 37 -     13097 T
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517 45 -     65777 T
e Lagothrix_lagothricha.k141_246028                          40966 37 +    110728 T
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885 23 +   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Indri_indri.k141_4600452                                    1394 44 -      1527 T
e Ictidomys_tridecemlineatus.JH393364.1                     384476 33 +   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837 37 +  11177569 T
e Hylobates_pileatus_b.LG02                                       2049482 37 + 191637585 T
e Hylobates_klossii.k141_738755                              10363 37 +     55766 T
e Hylobates_agilis.k141_1155965                               3180 37 +     12352 T
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590 37 +     83186 T
e Hoolock_leuconedys.ctg274                                    140145 37 -    630532 T
e Hipposideros_galeritus.HipGal_scaffold_23202               47193 37 +     49977 T
e Hipposideros_armiger.JXIK01000431.1                      1547877 37 -   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109 33 -    327341 T
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Gorilla_gorilla.LT578336.1                                 68181 25 +  33314783 T
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737 37 +     18121 T
e Felis_nigripes.FelNig_flattened_line_31944                 25108 37 -     30238 T
e Felis_catus_fca126.CM031415.1                          185113760 37 - 205367284 T
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Erythrocebus_patas.Contig38                               260217 37 +  21539334 T
e Equus_przewalskii.KK951119.1                              409840 36 -    498745 T
e Equus_caballus.CM000403.2                               21373054 36 +  39960074 T
e Equus_asinus.JREZ01000139.1                              3039120 36 -   4378816 T
e Eptesicus_fuscus.JH977646.1                             12576040 45 +  14770903 T
e Ellobius_talpinus.LOJH01026522.1                           10200 34 +     18970 T
e Ellobius_lutescens.LOEQ01008920.1                          28236 34 +    110024 T
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976 37 +     19438 T
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924 37 -    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139 37 -   1390856 T
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271 25 +  12879189 T
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549 38 -   1526836 T
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604 37 +     87169 T
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006 37 -     83289 T
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427 37 -      8242 T
e Condylura_cristata.JH655891.1                           35804984 37 +  53390261 T
e Colobus_polykomos.k141_1559707                              6362 37 -      6605 T
e Colobus_guereza.LG01                                      376350 37 - 200372422 T
e Colobus_angolensis.KN981557.1                             406473 37 -   2368649 T
e Chlorocebus_sabaeus.CM001947.1                            302019 37 - 135778131 T
e Chlorocebus_pygerythrus.k141_3063162                        7239 37 -     44032 T
e Chlorocebus_aethiops.ctg25                                340694 37 +  18827391 T
e Chiropotes_sagulatus.k141_1113111                           5818 37 +     34062 T
e Chiropotes_israelita.k141_313004                           40246 37 -    112038 T
e Chiropotes_albinasus.k141_1946120                           1561 37 +      5346 T
e Cheracebus_torquatus.k141_890198                           17175 37 +     39636 T
e Cheracebus_regulus.k141_471822                             17391 37 +    216457 T
e Cheracebus_lugens.k141_1179667                             17127 37 -     40346 T
e Cheracebus_lucifer.k141_2312002                             6714 37 -     32913 T
e Cheirogaleus_medius.k141_759766                             2852 36 -     15404 T
e Cheirogaleus_major.k141_666340                             28322 36 -     33796 T
e Cercopithecus_roloway.k141_3012935                         19797 37 +     36323 T
e Cercopithecus_pogonias.k141_6079                           22872 37 +     70610 T
e Cercopithecus_petaurista.k141_42573                         1353 37 +      8499 T
e Cercopithecus_nictitans.k141_2995370                       25200 37 -     32606 T
e Cercopithecus_neglectus.k141_858615                        29380 37 -     45857 T
e Cercopithecus_mona.ctg39                                  267919 37 +  21565898 T
e Cercopithecus_albogularis.ctg5                                  362211 37 -  39242232 T
e Cercopithecus_lowei.k141_2101310                            9612 37 -     25376 T
e Cercopithecus_hamlyni.k141_566925                          24903 37 -     34525 T
e Cercopithecus_diana.k141_132293                             9181 37 -     17524 T
e Cercopithecus_cephus.k141_4183004                           4991 37 +     20796 T
e Cercopithecus_ascanius.k141_3120866                        25022 30 -     40656 T
e Cercocebus_torquatus.k141_2159127                          41924 23 -    148725 T
e Cercocebus_lunulatus.k141_2779015                          41941 23 -     44860 T
e Cercocebus_chrysogaster.k141_1522556                       42108 23 +     47900 T
e Cercocebus_atys.KQ010504.1                                138368 23 -   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680 37 +     27315 T
e Cephalopachus_bancanus.k141_72622                           1235 37 -      1636 T
e Cebus_unicolor.k141_1654760                                64802 37 -     89041 T
e Cebus_olivaceus.k141_1404781                                5707 37 -     34880 T
e Cebus_albifrons.Contig27                                  368818 37 -  26074798 T
e Cebuella_pygmaea.k141_145798                               40615 37 +     53515 T
e Cebuella_niveiventris.k141_592277                           2729 37 -     12580 T
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094 36 -     39886 T
e Carlito_syrichta.NW_007259797.1                           268063 37 +    496798 T
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443 37 -     18408 T
e Callithrix_jacchus.pat_scaffold_3                      165451150 37 + 189096842 T
e Callithrix_geoffroyi.k119_473390                           16195 37 +     17162 T
e Callimico_goeldii.k141_1609886                              7497 29 -     13885 T
e Cacajao_melanocephalus.k141_619699                         18339 37 +    119600 T
e Cacajao_hosomi.k141_81245                                  18426 37 +     95584 T
e Cacajao_calvus.k141_89051                                  40900 37 -     91139 T
e Cacajao_ayresi.k141_96119                                   5606 37 +     28062 T
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889 36 -     19611 T
e Avahi_laniger.k141_2756659                                  3888 36 +     11645 T
e Ateles_paniscus.k141_866194                                20710 37 -     33135 T
e Ateles_marginatus.k141_970259                              46651 37 -     71267 T
e Ateles_geoffroyi_a.k141_1283730                              31280 37 +     44353 T
e Ateles_chamek.k141_615173                                   3727 37 -     28759 T
e Ateles_belzebuth.k141_1572163                               8590 37 +     48076 T
e Ateles_geoffroyi_b.tarseq_1536                               272423 37 +  21539123 T
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732 41 -     32367 T
e Aotus_vociferans.k141_944972                                6977 37 +      8415 T
e Aotus_trivirgatus.k141_192090                              21841 37 -     23494 T
e Aotus_nancymaae.KZ198451.1                                670199 37 +   5030052 T
e Aotus_griseimembra.k141_982342                             42186 37 +     43593 T
e Aotus_azarae.k141_118258                                   48439 37 -     65372 T
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387 37 -    412891 T
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624 37 +     42133 T
e Alouatta_puruensis.k141_251022                              6485 37 +     30854 T
e Alouatta_palliata.k141_638677                              44360 37 +     70886 T
e Alouatta_nigerrima.k141_376068                             38662 37 +     45454 T
e Alouatta_macconnelli.k141_361275                           21679 37 -     24835 T
e Alouatta_juara.k141_1687208                                40033 37 -     64179 T
e Alouatta_discolor.k141_2561099                             41595 37 +     55831 T
e Alouatta_caraya.k141_1109140                               42145 37 -     78289 T
e Alouatta_belzebul.k141_1011583                             69916 37 -     84148 T
e Allochrocebus_lhoesti.k141_441277                          41129 37 +     44087 T
e Allenopithecus_nigroviridis.k141_3755588                   45208 37 +     53615 T
e Allactaga_bullata.AllBul_scaffold_20030                    15727 23 -     61208 T
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313 37 +   1699592 T

a score=0.000000
s hg38.chrUn_KI270755v1                                       2297 46 +     36723 agaatttggaggcttctgcagatatggctaaatcttctccttcacc
s Gorilla_beringei.k141_3358147                               2611 46 -      8343 aggattagatggattctgcagatacggctaagtcttctctttcacc
i Gorilla_beringei.k141_3358147                          C 0 T 306
s Gorilla_gorilla.LT578336.1                                 68156 36 +  33314783 ---------TGGATTCTGCA-ATATGGCTAAGTCTTCTCCTTCACC
i Gorilla_gorilla.LT578336.1                             T 25 T 203
s Pan_troglodytes.CM009242.2                               1469235 46 - 189151597 agaattaggtggcttctgcagatatggctaagtcttcgccttcacc
i Pan_troglodytes.CM009242.2                             T 485 C 0
s Pongo_abelii.CM009266.2                                   175144 46 - 189387572 agaattaggtggcttctgcagatacggctaagtCTTCTCCTTCACC
i Pongo_abelii.CM009266.2                                C 0 T 333
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991 35 -     33621 T
e Petromus_typicus.PetTyp_scaffold_17301                     29661 35 -     56120 T
e Perognathus_longimembris.PerPac_flattened_line_28053       37455 83 +     38305 T
e Octodon_degus.JH651603.1                                11044981 35 -  11899542 T
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949 35 +    143317 T
e Heterocephalus_glaber.JH602082.1                         1924707 35 -  22651954 T
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606 34 +     14636 T
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201 82 -     10735 T
e Dipodomys_ordii.KN672350.1                              18948254 82 -  37912305 T
e Dinomys_branickii.DinBra_scaffold_10381                    96011 35 -    115145 T
e Cuniculus_paca.CunPac_flattened_line_7025                   1279 35 +     36344 T
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627 35 +     50838 T
e Cavia_tschudii.CavTsc_scaffold_23560                       60200 35 -     66877 T
e Cavia_porcellus.DS562891.1                               4997099 35 +  23407841 T
e Cavia_aperea.AVPZ01000300.1                              4993657 35 +  23392119 T
e Microgale_talazaci.MicTal_scaffold_6613                    41667 37 +    145209 T
e Echinops_telfairi.JH980293.1                            62851351 40 - 111700974 T
e Orycteropus_afer.OryAfe_flattened_line_171931              11056 37 -     14239 T
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408 29 -  20541912 T
e Pygathrix_nigripes_a.k141_215492                              5211 37 +     72585 T
e Pygathrix_nigripes_b.ctg100                                  150834 37 -   7812017 T
e Pygathrix_cinerea.k141_1153803                             24341 37 +     91421 T
e Callibella_humilis.k141_1233062                             7834 37 +     18648 T
e Perodicticus_potto.k141_1854441                            15139 37 -     24908 T
e Perodicticus_ibeanus.k141_1921260                          22769 37 +     31479 T
e Otolemur_garnettii.GL873799.1                             349529 37 +   1103335 T
e Otolemur_crassicaudatus.k141_649260                        36515 37 -     51505 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929 37 - 199412804 T
e Nycticebus_coucang.k141_8166032                             2064 37 +      2758 T
e Nycticebus_bengalensis.LG01                             93632675 37 + 196305487 T
e Loris_tardigradus.ctg83                                  5041044 37 -   6120653 T
e Loris_lydekkerianus.k141_2031736                            7384 37 +     19643 T
e Galagoides_demidoff.k141_561628                            16986 37 -     32986 T
e Galago_senegalensis.k141_991736                             4930 36 +     22493 T
e Galago_moholi.ctg3793                                     121389 36 -    137831 T
e Arctocebus_calabarensis.k141_1364444                       17350 37 -     45910 T
e Allochrocebus_solatus.k141_3554717                         15445 27 +     32033 T
e Allochrocebus_preussi.k141_1993939                         13769 28 -     21945 T
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503 37 -     31044 T
e Dasypus_novemcinctus.JH564415.1                          2107833 37 -   2246927 T
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495 37 -     19938 T
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743 37 +      5315 T
e Tupaia_tana.TupTan_flattened_line_394                       5859 37 -     70247 T
e Tupaia_chinensis.KB320699.1                              1831343 37 -   4065304 T
e Zalophus_californianus.ZalCal_flattened_line_17732         26391 37 -     86975 T
e Vulpes_lagopus.VulLag_flattened_line_12041                102738 37 -    112863 T
e Ursus_maritimus.KK499267.1                                179344 37 +   5085361 T
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224 37 -     97271 T
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227 37 -     18639 T
e Otocyon_megalotis.JAEUCK010005147.1                        37014 37 +    559221 T
e Odobenus_rosmarus.KB229312.1                             1449171 37 +   2017862 T
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975 37 +   9404916 T
e Neomonachus_schauinslandi.NINY01007730.1                11466383 37 -  31847680 T
e Mustela_putorius.JH418006.1                             14352449 37 +  14710649 T
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996 37 +     27589 T
e Mellivora_capensis.MelCap_flattened_line_19308             23509 37 -     74585 T
e Lycaon_pictus.CM007581.1                                41612373 37 +  59628241 T
e Leptonychotes_weddellii.KB714746.1                        810986 37 -   3914936 T
e Enhydra_lutris.KZ291758.1                               24913636 37 +  41312741 T
e Canis_lupus_orion.HG994398.1                            45104799 37 -  63665305 T
e Canis_lupus_familiaris.chr16                            41613218 37 +  59632846 T
e Canis_lupus_dingo.QKWQ01000480.1                          220083 37 +   9314153 T
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740 37 -     23171 T
e CanFam4.chr16                                           42503104 37 +  60362399 T
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672 37 -     15198 T
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834 37 +  29979442 T
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048 28 +      2695 T
e Xerus_inauris.XerIna_scaffold_2302                        171803 34 -    224448 T
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Varecia_variegata.k141_289850                              21738 36 -    147434 T
e Varecia_rubra.k141_787544                                  22831 36 -     30710 T
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988 37 -    105689 T
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579 37 +     59866 T
e Trachypithecus_phayrei.ctg124                             252848 37 -   6242583 T
e Trachypithecus_obscurus.k141_848057                         7609 37 -     13050 T
e Trachypithecus_melamera.k141_591572                          615 37 -      6147 T
e Trachypithecus_leucocephalus.k141_96450                     7187 37 +     22490 T
e Trachypithecus_laotum.k141_928651                          25744 37 -     63452 T
e Trachypithecus_hatinhensis.k141_31479                      27707 37 -     64340 T
e Trachypithecus_germaini.k141_57262                          6693 37 -     28527 T
e Trachypithecus_geei.k141_1001272                           25885 37 +     46913 T
e Trachypithecus_francoisi.k141_1453105                      25768 37 -     62838 T
e Trachypithecus_cristatus.k141_180416                       17543 37 +     25722 T
e Trachypithecus_crepusculus.k141_539312                     30906 37 -     78344 T
e Trachypithecus_auratus.k141_1189070                        18222 37 +     26378 T
e Tonatia_saurophila.TonSau_scaffold_294                    477420 37 -    610378 T
e Theropithecus_gelada.CM009954.1                           350535 23 - 186847797 T
e Tarsius_wallacei.k141_226975                                4794 37 +     20590 T
e Tarsius_lariang.k141_1780720                                4755 37 +      6850 T
e Tapirus_terrestris.TapTer_scaffold_755                    103056 37 -    539355 T
e Tapirus_indicus.TapInd_scaffold_7432                      189100 37 +    199430 T
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382 36 +      5583 T
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377 18 +     22964 T
e Symphalangus_syndactylus.tarseq_199                       388305 37 +   1523678 T
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274 33 +    196729 T
e Spermophilus_dauricus.KZ294078.1                         1866045 33 +   3870691 T
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078 38 -   1910179 T
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000 35 +     77746 T
e Semnopithecus_vetulus.k141_244474                          26080 37 -     48123 T
e Semnopithecus_schistaceus.k141_1432920                     23011 37 -     29113 T
e Semnopithecus_priam.k141_714795                            20331 37 -     42441 T
e Semnopithecus_johnii.k141_843753                           12673 37 -     45317 T
e Semnopithecus_hypoleucos.k141_1910531                      26177 37 +     58920 T
e Semnopithecus_entellus.k141_158471                         22658 37 +     27374 T
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762 37 +    313613 T
e Sapajus_macrocephalus.k141_796559                           5632 37 +     21866 T
e Sapajus_apella.ctg103                                     236042 37 +   5703754 T
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954 37 -      4301 T
e Saguinus_mystax.k141_8077960                                1588 37 +      5979 T
e Saguinus_midas.LG03                                       388907 37 - 209938924 T
e Saguinus_labiatus.k141_1571581                              1785 37 -      2099 T
e Saguinus_inustus.k141_2469308                               1640 37 +      5932 T
e Saguinus_imperator.k141_1898058                             1586 37 +      5971 T
e Saguinus_geoffroyi.k141_3779887                             1567 37 +      6077 T
e Saguinus_bicolor.k141_1429097                               1559 37 +     27962 T
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553 37 -    116970 T
e Rhinopithecus_strykeri.ctg102                             233778 36 -   7961872 T
e Rhinopithecus_roxellana.NC_044550.1                    104119518 36 + 195417433 T
e Rhinopithecus_bieti.k119_221883                            26170 36 +     27361 T
e Rhinolophus_sinicus.LVEH01000134.1                       2911225 37 +   3329780 T
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575 37 +  38429054 T
e Pteropus_vampyrus.KN525825.1                             3535136 37 -   4952924 T
e Pteropus_alecto.KB030862.1                               5838570 37 -  28871421 T
e Pteronotus_parnellii.KE847780.1                            49602 37 -     66298 T
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969 36 +     35169 T
e Propithecus_tattersalli.k141_1127767                       92332 36 -     98465 T
e Propithecus_perrieri.k141_1496898                          32061 36 +     46564 T
e Propithecus_edwardsi.k141_635656                            5736 36 -     30655 T
e Propithecus_diadema.k141_153680                             2000 36 -     11706 T
e Propithecus_coronatus.k141_209299                           1403 36 -      7103 T
e Propithecus_coquerelli.NW_012148875.1                    1563767 36 -   2598838 T
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145 37 -     80239 T
e Presbytis_comata.k141_1230337                              24950 37 +     69807 T
e Pongo_pygmaeus.ctg66                                      189970 115 -   9816681 T
e Plecturocebus_moloch.k141_1031110                          41783 37 +     89403 T
e Plecturocebus_miltoni.k141_349282                          40315 37 -     90634 T
e Plecturocebus_hoffmannsi.k141_3303950                      12399 37 -     67232 T
e Plecturocebus_grovesi.k141_2013005                          5463 37 -     60166 T
e Plecturocebus_dubius.k141_1058799                          40420 37 +     87928 T
e Plecturocebus_cupreus.k141_2351393                          5466 37 -     39403 T
e Plecturocebus_cinerascens.k141_1164729                     40767 37 -     88961 T
e Plecturocebus_caligatus.k141_1382851                       40374 37 -     87950 T
e Plecturocebus_brunneus.k141_862875                           970 37 -      9282 T
e Plecturocebus_bernhardi.k141_2549090                        5885 37 +     39866 T
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454 37 +     51125 T
e Pithecia_pithecia.tarseq_165                              554439 27 -   4542175 T
e Pithecia_pissinattii.k141_878371                           29470 37 +     51148 T
e Pithecia_mittermeieri.k141_1280039                         29707 37 +     63561 T
e Pithecia_hirsuta.k141_640380                               29431 37 +     58159 T
e Pithecia_chrysocephala.k141_785207                          3692 27 -     25401 T
e Pithecia_albicans.k141_1239476                             62596 37 +    207309 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564 46 +     22231 T
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453 37 +      5735 T
e Piliocolobus_kirkii.k141_579682                            44775 37 +     45295 T
e Piliocolobus_gordonorum.k141_905727                        62176 37 -     63152 T
e Piliocolobus_badius.k141_2495623                            6468 37 +      7560 T
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434 36 +  18517816 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589 37 +     78924 T
e Papio_ursinus.k141_2278143                                 19614 23 -     23640 T
e Papio_papio.k141_799093                                    12804 23 +     16796 T
e Papio_kindae.k141_2214839                                  19668 23 -     27687 T
e Papio_hamadryas.Contig39                                  288052 23 -  20919399 T
e Papio_cynocephalus.k141_1507553                             7013 23 +     21308 T
e Papio_anubis.CM001495.2                                   240549 23 - 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975 37 +   8748460 T
e Panthera_pardus.KV860321.1                              18459255 37 -  18783137 T
e Panthera_onca.PanOnc_flattened_line_3271                   21929 37 -    230217 T
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789 37 +    107918 T
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957 39 -    140218 T
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447 37 -     54323 T
e Nomascus_siki_b.tarseq_93                            8411333 37 -  22158432 T
e Nomascus_gabriellae.k141_57920                             13049 37 +     22201 T
e Nomascus_concolor.k141_735679                               7164 37 -     16345 T
e Nomascus_annamensis.k141_1771965                           51069 37 -    132029 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125173 31 -    149072 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317 37 +     34575 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264 36 +    130748 T
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625 45 +   4330536 T
e Myotis_davidii.KB100139.1                                4384803 45 +   6019432 T
e Myotis_brandtii.KE162005.1                               9790404 45 +  10118263 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388 45 +     47283 T
e Mungos_mungo.MunMun_flattened_line_18455                   15863 33 -     63510 T
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536 37 +    366855 T
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50085 18 -     62432 T
e Miopithecus_ogouensis.k141_1534655                         19736 37 -     27822 T
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357 35 +    200668 T
e Microcebus_murinus.CM007674.1                           74982290 36 +  93316391 T
e Mico_schneideri.k141_1877700                                     16341 37 -     26561 T
e Mico_humeralifer.k141_1180625                               8390 37 -     12984 T
e Mico_argentatus.k141_582562                                 7606 37 +     17804 T
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130 34 +    207569 T
e Marmota_marmota.CZRN01000018.1                           7498675 33 +  40650429 T
e Manis_pentadactyla.KN006162.1                             218512 37 +    317179 T
e Manis_javanica.JSZB01003497.1                             671221 37 -    737560 T
e Mandrillus_sphinx.Contig270                               354541 23 -    752769 T
e Mandrillus_leucophaeus.scaffold280                        319709 23 +  24302211 T
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942 37 -    270270 T
e Macaca_tonkeana.k141_339739                                  209 17 +     17132 T
e Macaca_thibetana.k99_41370                                 19612 23 +     21031 T
e Macaca_silenus.Contig273                                  268431 37 +    668171 T
e Macaca_siberu.k141_2185972                                 42498 70 +     59329 T
e Macaca_radiata.k141_3557992                                22677 37 +     24253 T
e Macaca_nigra.k141_2818840                                  46022 37 -     62418 T
e Macaca_nemestrina.KQ007038.1                              396858 37 +  25927173 T
e Macaca_mulatta.NC_041758.1                                412635 37 - 187317192 T
e Macaca_maura.k141_1103459                                  43467 70 +     51645 T
e Macaca_leonina.k141_321385                                 33696 37 -     50087 T
e Macaca_fuscata.k119_546792                                 22506 37 +     30527 T
e Macaca_fascicularis.k141_1397292                           19657 27 -     24934 T
e Macaca_cyclopis.k119_263443                                22554 23 +     30207 T
e Macaca_assamensis.Contig5                                 370299 37 -  60120075 T
e Macaca_arctoides.k141_1757516                              42638 23 -     61512 T
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321 23 -   1826925 T
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679 36 +     16388 T
e Lepilemur_ruficaudatus.k141_330196                          6685 36 +     24756 T
e Lepilemur_dorsalis.k141_387009                              6675 36 +     31569 T
e Lepilemur_ankaranensis.k141_567626                          6678 36 +     29618 T
e Leontopithecus_rosalia.k141_349454                          9242 37 -     12945 T
e Leontopithecus_chrysomelas.k141_1327670                     7861 37 -     11567 T
e Leontocebus_nigricollis.k141_3905062                        1228 37 -      5717 T
e Leontocebus_illigeri.k141_2951200                           1597 37 +      5940 T
e Leontocebus_fuscicollis.k141_2994775                        1646 37 -     13097 T
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517 45 -     65777 T
e Lagothrix_lagothricha.k141_246028                          40966 37 +    110728 T
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885 23 +   9596543 T
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Indri_indri.k141_4600452                                    1394 44 -      1527 T
e Ictidomys_tridecemlineatus.JH393364.1                     384476 33 +   7955117 T
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837 37 +  11177569 T
e Hylobates_pileatus_b.LG02                                       2049482 37 + 191637585 T
e Hylobates_klossii.k141_738755                              10363 37 +     55766 T
e Hylobates_agilis.k141_1155965                               3180 37 +     12352 T
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590 37 +     83186 T
e Hoolock_leuconedys.ctg274                                    140145 37 -    630532 T
e Hipposideros_galeritus.HipGal_scaffold_23202               47193 37 +     49977 T
e Hipposideros_armiger.JXIK01000431.1                      1547877 37 -   1711038 T
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109 33 -    327341 T
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737 37 +     18121 T
e Felis_nigripes.FelNig_flattened_line_31944                 25108 37 -     30238 T
e Felis_catus_fca126.CM031415.1                          185113760 37 - 205367284 T
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Erythrocebus_patas.Contig38                               260217 37 +  21539334 T
e Equus_przewalskii.KK951119.1                              409840 36 -    498745 T
e Equus_caballus.CM000403.2                               21373054 36 +  39960074 T
e Equus_asinus.JREZ01000139.1                              3039120 36 -   4378816 T
e Eptesicus_fuscus.JH977646.1                             12576040 45 +  14770903 T
e Ellobius_talpinus.LOJH01026522.1                           10200 34 +     18970 T
e Ellobius_lutescens.LOEQ01008920.1                          28236 34 +    110024 T
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976 37 +     19438 T
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924 37 -    198055 T
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139 37 -   1390856 T
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271 25 +  12879189 T
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549 38 -   1526836 T
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604 37 +     87169 T
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006 37 -     83289 T
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427 37 -      8242 T
e Condylura_cristata.JH655891.1                           35804984 37 +  53390261 T
e Colobus_polykomos.k141_1559707                              6362 37 -      6605 T
e Colobus_guereza.LG01                                      376350 37 - 200372422 T
e Colobus_angolensis.KN981557.1                             406473 37 -   2368649 T
e Chlorocebus_sabaeus.CM001947.1                            302019 37 - 135778131 T
e Chlorocebus_pygerythrus.k141_3063162                        7239 37 -     44032 T
e Chlorocebus_aethiops.ctg25                                340694 37 +  18827391 T
e Chiropotes_sagulatus.k141_1113111                           5818 37 +     34062 T
e Chiropotes_israelita.k141_313004                           40246 37 -    112038 T
e Chiropotes_albinasus.k141_1946120                           1561 37 +      5346 T
e Cheracebus_torquatus.k141_890198                           17175 37 +     39636 T
e Cheracebus_regulus.k141_471822                             17391 37 +    216457 T
e Cheracebus_lugens.k141_1179667                             17127 37 -     40346 T
e Cheracebus_lucifer.k141_2312002                             6714 37 -     32913 T
e Cheirogaleus_medius.k141_759766                             2852 36 -     15404 T
e Cheirogaleus_major.k141_666340                             28322 36 -     33796 T
e Cercopithecus_roloway.k141_3012935                         19797 37 +     36323 T
e Cercopithecus_pogonias.k141_6079                           22872 37 +     70610 T
e Cercopithecus_petaurista.k141_42573                         1353 37 +      8499 T
e Cercopithecus_nictitans.k141_2995370                       25200 37 -     32606 T
e Cercopithecus_neglectus.k141_858615                        29380 37 -     45857 T
e Cercopithecus_mona.ctg39                                  267919 37 +  21565898 T
e Cercopithecus_albogularis.ctg5                                  362211 37 -  39242232 T
e Cercopithecus_lowei.k141_2101310                            9612 37 -     25376 T
e Cercopithecus_hamlyni.k141_566925                          24903 37 -     34525 T
e Cercopithecus_diana.k141_132293                             9181 37 -     17524 T
e Cercopithecus_cephus.k141_4183004                           4991 37 +     20796 T
e Cercopithecus_ascanius.k141_3120866                        25022 30 -     40656 T
e Cercocebus_torquatus.k141_2159127                          41924 23 -    148725 T
e Cercocebus_lunulatus.k141_2779015                          41941 23 -     44860 T
e Cercocebus_chrysogaster.k141_1522556                       42108 23 +     47900 T
e Cercocebus_atys.KQ010504.1                                138368 23 -   4669795 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680 37 +     27315 T
e Cephalopachus_bancanus.k141_72622                           1235 37 -      1636 T
e Cebus_unicolor.k141_1654760                                64802 37 -     89041 T
e Cebus_olivaceus.k141_1404781                                5707 37 -     34880 T
e Cebus_albifrons.Contig27                                  368818 37 -  26074798 T
e Cebuella_pygmaea.k141_145798                               40615 37 +     53515 T
e Cebuella_niveiventris.k141_592277                           2729 37 -     12580 T
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094 36 -     39886 T
e Carlito_syrichta.NW_007259797.1                           268063 37 +    496798 T
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443 37 -     18408 T
e Callithrix_jacchus.pat_scaffold_3                      165451150 37 + 189096842 T
e Callithrix_geoffroyi.k119_473390                           16195 37 +     17162 T
e Callimico_goeldii.k141_1609886                              7497 29 -     13885 T
e Cacajao_melanocephalus.k141_619699                         18339 37 +    119600 T
e Cacajao_hosomi.k141_81245                                  18426 37 +     95584 T
e Cacajao_calvus.k141_89051                                  40900 37 -     91139 T
e Cacajao_ayresi.k141_96119                                   5606 37 +     28062 T
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889 36 -     19611 T
e Avahi_laniger.k141_2756659                                  3888 36 +     11645 T
e Ateles_paniscus.k141_866194                                20710 37 -     33135 T
e Ateles_marginatus.k141_970259                              46651 37 -     71267 T
e Ateles_geoffroyi_a.k141_1283730                              31280 37 +     44353 T
e Ateles_chamek.k141_615173                                   3727 37 -     28759 T
e Ateles_belzebuth.k141_1572163                               8590 37 +     48076 T
e Ateles_geoffroyi_b.tarseq_1536                               272423 37 +  21539123 T
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732 41 -     32367 T
e Aotus_vociferans.k141_944972                                6977 37 +      8415 T
e Aotus_trivirgatus.k141_192090                              21841 37 -     23494 T
e Aotus_nancymaae.KZ198451.1                                670199 37 +   5030052 T
e Aotus_griseimembra.k141_982342                             42186 37 +     43593 T
e Aotus_azarae.k141_118258                                   48439 37 -     65372 T
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387 37 -    412891 T
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624 37 +     42133 T
e Alouatta_puruensis.k141_251022                              6485 37 +     30854 T
e Alouatta_palliata.k141_638677                              44360 37 +     70886 T
e Alouatta_nigerrima.k141_376068                             38662 37 +     45454 T
e Alouatta_macconnelli.k141_361275                           21679 37 -     24835 T
e Alouatta_juara.k141_1687208                                40033 37 -     64179 T
e Alouatta_discolor.k141_2561099                             41595 37 +     55831 T
e Alouatta_caraya.k141_1109140                               42145 37 -     78289 T
e Alouatta_belzebul.k141_1011583                             69916 37 -     84148 T
e Allochrocebus_lhoesti.k141_441277                          41129 37 +     44087 T
e Allenopithecus_nigroviridis.k141_3755588                   45208 37 +     53615 T
e Allactaga_bullata.AllBul_scaffold_20030                    15727 23 -     61208 T
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313 37 +   1699592 T

a score=0.000000
s hg38.chrUn_KI270755v1                                       2343 3 +     36723 a-cc
s Acinonyx_jubatus.LLWD01001279.1                           810276 3 +   1699592 a-cc
i Acinonyx_jubatus.LLWD01001279.1                        T 37 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412797 3 +  29979442 A-TA
i Ailuropoda_melanoleuca.LNAT01000098.1                  T 37 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15704 3 -     61208 A-CC
i Allactaga_bullata.AllBul_scaffold_20030                T 23 I 1
s Allenopithecus_nigroviridis.k141_3755588                   45171 3 +     53615 a-ct
i Allenopithecus_nigroviridis.k141_3755588               T 37 C 0
s Allochrocebus_lhoesti.k141_441277                          41092 3 +     44087 A-CC
i Allochrocebus_lhoesti.k141_441277                      T 37 C 0
s Alouatta_belzebul.k141_1011583                             69879 3 -     84148 A-CC
i Alouatta_belzebul.k141_1011583                         T 37 C 0
s Alouatta_caraya.k141_1109140                               42108 3 -     78289 A-CC
i Alouatta_caraya.k141_1109140                           T 37 C 0
s Alouatta_discolor.k141_2561099                             41558 3 +     55831 A-CC
i Alouatta_discolor.k141_2561099                         T 37 C 0
s Alouatta_juara.k141_1687208                                39996 3 -     64179 A-CC
i Alouatta_juara.k141_1687208                            T 37 C 0
s Alouatta_macconnelli.k141_361275                           21642 3 -     24835 A-CC
i Alouatta_macconnelli.k141_361275                       T 37 C 0
s Alouatta_nigerrima.k141_376068                             38625 3 +     45454 A-CC
i Alouatta_nigerrima.k141_376068                         T 37 C 0
s Alouatta_palliata.k141_638677                              44323 3 +     70886 A-CC
i Alouatta_palliata.k141_638677                          T 37 C 0
s Alouatta_puruensis.k141_251022                              6448 3 +     30854 A-CC
i Alouatta_puruensis.k141_251022                         T 37 C 0
s Alouatta_seniculus.k141_928287                             30587 3 +     42133 A-CC
i Alouatta_seniculus.k141_928287                         T 37 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174350 3 -    412891 a-ct
i Anoura_caudifer.AnoCau_scaffold_1412                   T 37 C 0
s Aotus_azarae.k141_118258                                   48402 3 -     65372 A-CC
i Aotus_azarae.k141_118258                               T 37 C 0
s Aotus_griseimembra.k141_982342                             42149 3 +     43593 A-CC
i Aotus_griseimembra.k141_982342                         T 37 C 0
s Aotus_nancymaae.KZ198451.1                                670162 3 +   5030052 A-CC
i Aotus_nancymaae.KZ198451.1                             T 37 C 0
s Aotus_trivirgatus.k141_192090                              21804 3 -     23494 A-CC
i Aotus_trivirgatus.k141_192090                          T 37 C 0
s Aotus_vociferans.k141_944972                                6940 3 +      8415 A-CC
i Aotus_vociferans.k141_944972                           T 37 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13691 3 -     32367 a-cc
i Aplodontia_rufa.AprRuf_scaffold_46868                  T 41 C 0
s Arctocebus_calabarensis.k141_1364444                       17313 3 -     45910 A-CC
i Arctocebus_calabarensis.k141_1364444                   T 37 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2635 3 -     15198 a-ct
i Artibeus_jamaicensis.ArtJam_scaffold_73666             T 37 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272386 3 +  21539123 A-CC
i Ateles_geoffroyi_b.tarseq_1536                            T 37 C 0
s Ateles_belzebuth.k141_1572163                               8553 3 +     48076 A-CC
i Ateles_belzebuth.k141_1572163                          T 37 C 0
s Ateles_chamek.k141_615173                                   3690 3 -     28759 A-CC
i Ateles_chamek.k141_615173                              T 37 C 0
s Ateles_geoffroyi_a.k141_1283730                              31243 3 +     44353 A-CC
i Ateles_geoffroyi_a.k141_1283730                          T 37 C 0
s Ateles_marginatus.k141_970259                              46614 3 -     71267 A-CC
i Ateles_marginatus.k141_970259                          T 37 C 0
s Ateles_paniscus.k141_866194                                20673 3 -     33135 A-CC
i Ateles_paniscus.k141_866194                            T 37 C 0
s Avahi_laniger.k141_2756659                                  3852 3 +     11645 a-cc
i Avahi_laniger.k141_2756659                             T 36 C 0
s Avahi_peyrierasi.k141_1823318                               3853 3 -     19611 a-cc
i Avahi_peyrierasi.k141_1823318                          T 36 C 0
s Cacajao_ayresi.k141_96119                                   5569 3 +     28062 A-CC
i Cacajao_ayresi.k141_96119                              T 37 C 0
s Cacajao_calvus.k141_89051                                  40863 3 -     91139 A-CC
i Cacajao_calvus.k141_89051                              T 37 C 0
s Cacajao_hosomi.k141_81245                                  18389 3 +     95584 A-CC
i Cacajao_hosomi.k141_81245                              T 37 C 0
s Cacajao_melanocephalus.k141_619699                         18302 3 +    119600 A-CC
i Cacajao_melanocephalus.k141_619699                     T 37 C 0
s Callibella_humilis.k141_1233062                             7797 3 +     18648 A-CC
i Callibella_humilis.k141_1233062                        T 37 C 0
s Callimico_goeldii.k141_1609886                              7468 1 -     13885 A---
i Callimico_goeldii.k141_1609886                         T 29 C 0
s Callithrix_geoffroyi.k119_473390                           16158 3 +     17162 A-CA
i Callithrix_geoffroyi.k119_473390                       T 37 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451113 3 + 189096842 A-CA
i Callithrix_jacchus.pat_scaffold_3                      T 37 C 0
s Callithrix_kuhlii.k119_404482                              17406 3 -     18408 A-CA
i Callithrix_kuhlii.k119_404482                          T 37 C 0
s CanFam4.chr16                                           42503067 3 +  60362399 a-cc
i CanFam4.chr16                                          T 37 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6703 3 -     23171 a-cc
i Canis_lupus_VD.CanFam_VD_scaffold_35101                T 37 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220046 3 +   9314153 A-CC
i Canis_lupus_dingo.QKWQ01000480.1                       T 37 C 0
s Canis_lupus_familiaris.chr16                            41613181 3 +  59632846 a-cc
i Canis_lupus_familiaris.chr16                           T 37 C 0
s Canis_lupus_orion.HG994398.1                            45104762 3 -  63665305 a-cc
i Canis_lupus_orion.HG994398.1                           T 37 C 0
s Carlito_syrichta.NW_007259797.1                           268026 3 +    496798 A-CC
i Carlito_syrichta.NW_007259797.1                        T 37 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2706 3 +      5315 a-ct
i Carollia_perspicillata.CarPer_scaffold_170178          T 37 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20058 3 -     39886 g-gc
i Castor_canadensis.CasCan_scaffold_39952                T 36 C 0
s Cavia_aperea.AVPZ01000300.1                              4993622 1 +  23392119 ---T
i Cavia_aperea.AVPZ01000300.1                            T 35 C 0
s Cavia_porcellus.DS562891.1                               4997064 1 +  23407841 ---c
i Cavia_porcellus.DS562891.1                             T 35 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60165 1 -     66877 ---C
i Cavia_tschudii.CavTsc_scaffold_23560                   T 35 C 0
s Cebuella_niveiventris.k141_592277                           2692 3 -     12580 A-CC
i Cebuella_niveiventris.k141_592277                      T 37 C 0
s Cebuella_pygmaea.k141_145798                               40578 3 +     53515 A-CC
i Cebuella_pygmaea.k141_145798                           T 37 C 0
s Cebus_albifrons.Contig27                                  368781 3 -  26074798 A-CC
i Cebus_albifrons.Contig27                               T 37 C 0
s Cebus_olivaceus.k141_1404781                                5670 3 -     34880 A-CC
i Cebus_olivaceus.k141_1404781                           T 37 C 0
s Cebus_unicolor.k141_1654760                                64765 3 -     89041 A-CC
i Cebus_unicolor.k141_1654760                            T 37 C 0
s Cephalopachus_bancanus.k141_72622                           1198 3 -      1636 A-CC
i Cephalopachus_bancanus.k141_72622                      T 37 C 0
s Ceratotherium_simum.JH767749.1                          15489810 3 -  27778364 a-cc
i Ceratotherium_simum.JH767749.1                         T 37 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16643 3 +     27315 a-cc
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      T 37 C 0
s Cercopithecus_cephus.k141_4183004                           4954 3 +     20796 A-CC
i Cercopithecus_cephus.k141_4183004                      T 37 C 0
s Cercopithecus_diana.k141_132293                             9144 3 -     17524 A-CC
i Cercopithecus_diana.k141_132293                        T 37 C 0
s Cercopithecus_hamlyni.k141_566925                          24866 3 -     34525 A-CC
i Cercopithecus_hamlyni.k141_566925                      T 37 C 0
s Cercopithecus_lowei.k141_2101310                            9575 3 -     25376 A-CC
i Cercopithecus_lowei.k141_2101310                       T 37 C 0
s Cercopithecus_albogularis.ctg5                                  362174 3 -  39242232 A-CC
i Cercopithecus_albogularis.ctg5                               T 37 C 0
s Cercopithecus_mona.ctg39                                  267882 3 +  21565898 A-CC
i Cercopithecus_mona.ctg39                               T 37 C 0
s Cercopithecus_neglectus.k141_858615                        29343 3 -     45857 A-CC
i Cercopithecus_neglectus.k141_858615                    T 37 C 0
s Cercopithecus_nictitans.k141_2995370                       25163 3 -     32606 A-CC
i Cercopithecus_nictitans.k141_2995370                   T 37 C 0
s Cercopithecus_petaurista.k141_42573                         1316 3 +      8499 A-CC
i Cercopithecus_petaurista.k141_42573                    T 37 C 0
s Cercopithecus_pogonias.k141_6079                           22835 3 +     70610 A-CC
i Cercopithecus_pogonias.k141_6079                       T 37 C 0
s Cercopithecus_roloway.k141_3012935                         19760 3 +     36323 A-CC
i Cercopithecus_roloway.k141_3012935                     T 37 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10458 3 -     19938 g-cc
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        T 37 C 0
s Cheirogaleus_major.k141_666340                             28286 3 -     33796 A-GC
i Cheirogaleus_major.k141_666340                         T 36 C 0
s Cheirogaleus_medius.k141_759766                             2816 3 -     15404 a-gc
i Cheirogaleus_medius.k141_759766                        T 36 C 0
s Cheracebus_lucifer.k141_2312002                             6677 3 -     32913 A-CC
i Cheracebus_lucifer.k141_2312002                        T 37 C 0
s Cheracebus_lugens.k141_1179667                             17090 3 -     40346 A-CC
i Cheracebus_lugens.k141_1179667                         T 37 C 0
s Cheracebus_regulus.k141_471822                             17354 3 +    216457 A-CC
i Cheracebus_regulus.k141_471822                         T 37 C 0
s Cheracebus_torquatus.k141_890198                           17138 3 +     39636 A-CC
i Cheracebus_torquatus.k141_890198                       T 37 C 0
s Chiropotes_albinasus.k141_1946120                           1524 3 +      5346 A-CC
i Chiropotes_albinasus.k141_1946120                      T 37 C 0
s Chiropotes_israelita.k141_313004                           40209 3 -    112038 A-CC
i Chiropotes_israelita.k141_313004                       T 37 C 0
s Chiropotes_sagulatus.k141_1113111                           5781 3 +     34062 A-CC
i Chiropotes_sagulatus.k141_1113111                      T 37 C 0
s Chlorocebus_aethiops.ctg25                                340657 3 +  18827391 A-CC
i Chlorocebus_aethiops.ctg25                             T 37 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7202 3 -     44032 A-CC
i Chlorocebus_pygerythrus.k141_3063162                   T 37 C 0
s Chlorocebus_sabaeus.CM001947.1                            301982 3 - 135778131 A-CC
i Chlorocebus_sabaeus.CM001947.1                         T 37 C 0
s Colobus_angolensis.KN981557.1                             406436 3 -   2368649 A-CC
i Colobus_angolensis.KN981557.1                          T 37 C 0
s Colobus_guereza.LG01                                      376313 3 - 200372422 a-cc
i Colobus_guereza.LG01                                   T 37 C 0
s Colobus_polykomos.k141_1559707                              6325 3 -      6605 A-CC
i Colobus_polykomos.k141_1559707                         T 37 C 0
s Condylura_cristata.JH655891.1                           35804947 4 +  53390261 ATTC
i Condylura_cristata.JH655891.1                          T 37 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           390 3 -      8242 a-ct
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     T 37 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 39969 3 -     83289 A-AC
i Cricetomys_gambianus.CriGam_scaffold_14425             T 37 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1567 3 +     87169 A-TC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         T 37 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642511 3 -   1526836 A-TA
i Ctenodactylus_gundi.CteGun_scaffold_65                 T 38 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2592 1 +     50838 ---C
i Ctenomys_sociabilis.CteSoc_scaffold_30159              T 35 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1244 1 +     36344 ---T
i Cuniculus_paca.CunPac_flattened_line_7025              T 35 C 0
s Dasypus_novemcinctus.JH564415.1                          2107796 3 -   2246927 g-ac
i Dasypus_novemcinctus.JH564415.1                        T 37 C 0
s Desmodus_rotundus.KZ672289.1                            11862379 3 -  20541912 a-ct
i Desmodus_rotundus.KZ672289.1                           T 29 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662102 3 -   1390856 a-cc
i Dicerorhinus_sumatrensis.PEKH010002091.1               T 37 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136887 3 -    198055 a-cc
i Diceros_bicornis.DicBicMic_scaffold_5955               T 37 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    95976 1 -    115145 ---C
i Dinomys_branickii.DinBra_scaffold_10381                T 35 C 0
s Dipodomys_ordii.KN672350.1                              18948172 3 -  37912305 A-CG
i Dipodomys_ordii.KN672350.1                             T 82 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3119 3 -     10735 A-CG
i Dipodomys_stephensi.DipSte_scaffold_89095              T 82 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7572 1 +     14636 ---C
i Dolichotis_patagonum.DolPat_scaffold_80628             T 34 C 0
s Echinops_telfairi.JH980293.1                            62851311 3 - 111700974 g-cc
i Echinops_telfairi.JH980293.1                           T 40 C 0
s Eidolon_helvum.AWHC01266696.1                               3939 3 +     19438 a-ct
i Eidolon_helvum.AWHC01266696.1                          T 37 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28202 3 +    110024 G-AA
i Ellobius_lutescens.LOEQ01008920.1                      T 34 C 0
s Ellobius_talpinus.LOJH01026522.1                           10166 3 +     18970 a-aa
i Ellobius_talpinus.LOJH01026522.1                       T 34 C 0
s Enhydra_lutris.KZ291758.1                               24913599 3 +  41312741 a-cc
i Enhydra_lutris.KZ291758.1                              T 37 C 0
s Equus_asinus.JREZ01000139.1                              3039084 3 -   4378816 a-cc
i Equus_asinus.JREZ01000139.1                            T 36 C 0
s Equus_caballus.CM000403.2                               21373018 3 +  39960074 a-cc
i Equus_caballus.CM000403.2                              T 36 C 0
s Equus_przewalskii.KK951119.1                              409804 3 -    498745 a-cc
i Equus_przewalskii.KK951119.1                           T 36 C 0
s Erythrocebus_patas.Contig38                               260180 3 +  21539334 A-CC
i Erythrocebus_patas.Contig38                            T 37 C 0
s Felis_catus.CM001381.2                                 186243941 3 - 206538554 A-CC
i Felis_catus.CM001381.2                                 T 37 C 0
s Felis_catus_fca126.CM031415.1                          185113723 3 - 205367284 A-CC
i Felis_catus_fca126.CM031415.1                          T 37 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25071 3 -     30238 a-cc
i Felis_nigripes.FelNig_flattened_line_31944             T 37 C 0
s Galago_moholi.ctg3793                                     121353 3 -    137831 A-CC
i Galago_moholi.ctg3793                                  T 36 C 0
s Galago_senegalensis.k141_991736                             4894 3 +     22493 A-CC
i Galago_senegalensis.k141_991736                        T 36 C 0
s Galagoides_demidoff.k141_561628                            16949 3 -     32986 A-CC
i Galagoides_demidoff.k141_561628                        T 37 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16700 3 +     18121 a-cc
i Galeopterus_variegatus.GalVar_scaffold_74466           T 37 C 0
s Gorilla_beringei.k141_3358147                               2351 3 -      8343 a-cc
i Gorilla_beringei.k141_3358147                          T 306 C 0
s Gorilla_gorilla.LT578341.1                                251841 3 - 186649187 A-CC
i Gorilla_gorilla.LT578341.1                             T 47 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28076 3 -    327341 A-TC
i Helogale_parvula.HelPar_flattened_line_2585            T 33 C 0
s Heterocephalus_glaber.JH602082.1                         1924672 1 -  22651954 ---c
i Heterocephalus_glaber.JH602082.1                       T 35 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547840 3 -   1711038 a-ct
i Hipposideros_armiger.JXIK01000431.1                    T 37 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47156 3 +     49977 a-ct
i Hipposideros_galeritus.HipGal_scaffold_23202           T 37 C 0
s Hoolock_leuconedys.ctg274                                    140108 3 -    630532 A-CC
i Hoolock_leuconedys.ctg274                                 T 37 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66553 3 +     83186 A-TC
i Hyaena_hyaena.HyaHya_flattened_line_14808              T 37 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68914 1 +    143317 ---C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        T 35 C 0
s Hylobates_agilis.k141_1155965                               3143 3 +     12352 a-cg
i Hylobates_agilis.k141_1155965                          T 37 C 0
s Hylobates_klossii.k141_738755                              10326 3 +     55766 a-cg
i Hylobates_klossii.k141_738755                          T 37 C 0
s Hylobates_pileatus_b.LG02                                       2049445 3 + 191637585 a-cc
i Hylobates_pileatus_b.LG02                                     T 37 I 477
s Hylobates_pileatus_a.tarseq_633                            7798800 3 +  11177569 A-CT
i Hylobates_pileatus_a.tarseq_633                          T 37 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384443 3 +   7955117 A-CC
i Ictidomys_tridecemlineatus.JH393364.1                  T 33 C 0
s Indri_indri.k141_4600452                                    1350 3 -      1527 A-CC
i Indri_indri.k141_4600452                               T 44 C 0
s Jaculus_jaculus.JH725527.1                               1236862 3 +   9596543 A-CC
i Jaculus_jaculus.JH725527.1                             T 23 I 1
s Lagothrix_lagothricha.k141_246028                          40929 3 +    110728 A-CC
i Lagothrix_lagothricha.k141_246028                      T 37 C 0
s Leontocebus_fuscicollis.k141_2994775                        1609 3 -     13097 A-CC
i Leontocebus_fuscicollis.k141_2994775                   T 37 C 0
s Leontocebus_illigeri.k141_2951200                           1560 3 +      5940 A-CC
i Leontocebus_illigeri.k141_2951200                      T 37 C 0
s Leontocebus_nigricollis.k141_3905062                        1191 3 -      5717 A-CC
i Leontocebus_nigricollis.k141_3905062                   T 37 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7824 3 -     11567 A-CC
i Leontopithecus_chrysomelas.k141_1327670                T 37 C 0
s Leontopithecus_rosalia.k141_349454                          9205 3 -     12945 A-CC
i Leontopithecus_rosalia.k141_349454                     T 37 C 0
s Lepilemur_ankaranensis.k141_567626                          6642 3 +     29618 A-GC
i Lepilemur_ankaranensis.k141_567626                     T 36 C 0
s Lepilemur_dorsalis.k141_387009                              6639 3 +     31569 A-GC
i Lepilemur_dorsalis.k141_387009                         T 36 C 0
s Lepilemur_ruficaudatus.k141_330196                          6649 3 +     24756 a-gc
i Lepilemur_ruficaudatus.k141_330196                     T 36 C 0
s Lepilemur_septentrionalis.k141_360456                       6643 3 +     16388 A-GC
i Lepilemur_septentrionalis.k141_360456                  T 36 C 0
s Leptonychotes_weddellii.KB714746.1                        810949 3 -   3914936 a-cc
i Leptonychotes_weddellii.KB714746.1                     T 37 C 0
s Loris_lydekkerianus.k141_2031736                            7347 3 +     19643 A-CC
i Loris_lydekkerianus.k141_2031736                       T 37 C 0
s Loris_tardigradus.ctg83                                  5041007 3 -   6120653 A-CC
i Loris_tardigradus.ctg83                                T 37 C 0
s Lycaon_pictus.CM007581.1                                41612336 3 +  59628241 a-cc
i Lycaon_pictus.CM007581.1                               T 37 C 0
s Macaca_assamensis.Contig5                                 370262 3 -  60120075 A-CC
i Macaca_assamensis.Contig5                              T 37 C 0
s Macaca_fuscata.k119_546792                                 22469 3 +     30527 A-CC
i Macaca_fuscata.k119_546792                             T 37 C 0
s Macaca_leonina.k141_321385                                 33659 3 -     50087 A-CC
i Macaca_leonina.k141_321385                             T 37 C 0
s Macaca_maura.k141_1103459                                  43397 3 +     51645 A-CC
i Macaca_maura.k141_1103459                              T 70 I 33
s Macaca_mulatta.NC_041758.1                                412598 3 - 187317192 g-cc
i Macaca_mulatta.NC_041758.1                             T 37 C 0
s Macaca_nemestrina.KQ007038.1                              396821 3 +  25927173 A-CC
i Macaca_nemestrina.KQ007038.1                           T 37 C 0
s Macaca_nigra.k141_2818840                                  45985 3 -     62418 A-CC
i Macaca_nigra.k141_2818840                              T 37 C 0
s Macaca_radiata.k141_3557992                                22640 3 +     24253 A-CC
i Macaca_radiata.k141_3557992                            T 37 C 0
s Macaca_siberu.k141_2185972                                 42428 3 +     59329 A-CT
i Macaca_siberu.k141_2185972                             T 70 C 0
s Macaca_silenus.Contig273                                  268394 3 +    668171 A-CT
i Macaca_silenus.Contig273                               T 37 C 0
s Macaca_tonkeana.k141_1880923                               33341 3 +     33478 A-CC
i Macaca_tonkeana.k141_1880923                           T 23 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220905 3 -    270270 a-ct
i Macroglossus_sobrinus.MacSob_scaffold_4024             T 37 C 0
s Manis_javanica.JSZB01003497.1                             671184 3 -    737560 a-ac
i Manis_javanica.JSZB01003497.1                          T 37 C 0
s Manis_pentadactyla.KN006162.1                             218475 3 +    317179 a-cc
i Manis_pentadactyla.KN006162.1                          T 37 C 0
s Marmota_marmota.CZRN01000018.1                           7498642 3 +  40650429 A-cc
i Marmota_marmota.CZRN01000018.1                         T 33 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148096 3 +    207569 a-ct
i Megaderma_lyra.MegLyr_scaffold_4542                    T 34 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23472 3 -     74585 a-cc
i Mellivora_capensis.MelCap_flattened_line_19308         T 37 C 0
s Mico_argentatus.k141_582562                                 7569 3 +     17804 A-CC
i Mico_argentatus.k141_582562                            T 37 C 0
s Mico_humeralifer.k141_1180625                               8353 3 -     12984 A-CC
i Mico_humeralifer.k141_1180625                          T 37 C 0
s Mico_schneideri.k141_1877700                                     16304 3 -     26561 A-CC
i Mico_schneideri.k141_1877700                                 T 37 C 0
s Microcebus_murinus.CM007674.1                           74982254 3 +  93316391 A-CC
i Microcebus_murinus.CM007674.1                          T 36 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41630 3 +    145209 T-CC
i Microgale_talazaci.MicTal_scaffold_6613                T 37 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182322 3 +    200668 a-ct
i Micronycteris_hirsuta.MicHir_scaffold_2233             T 35 C 0
s Miopithecus_ogouensis.k141_1534655                         19699 3 -     27822 A-CC
i Miopithecus_ogouensis.k141_1534655                     T 37 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5959 3 +     27589 a-cc
i Mirounga_angustirostris.MirAng_flattened_line_54046    T 37 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176499 3 +    366855 A-CT
i Mormoops_blainvillei.MorMeg_scaffold_1417              T 37 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15830 3 -     63510 A-TC
i Mungos_mungo.MunMun_flattened_line_18455               T 33 C 0
s Mustela_putorius.JH418006.1                             14352412 3 +  14710649 a-cc
i Mustela_putorius.JH418006.1                            T 37 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117228 3 +    130748 a-cc
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           T 36 C 0
s Nasalis_larvatus.k141_1350636                              26280 3 +     34575 A-CC
i Nasalis_larvatus.k141_1350636                          T 37 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466346 3 -  31847680 a-cc
i Neomonachus_schauinslandi.NINY01007730.1               T 37 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125142 3 -    149072 C-CT
i Noctilio_leporinus.NocLep_scaffold_7894                T 31 C 0
s Nomascus_annamensis.k141_1771965                           51032 3 -    132029 A-CC
i Nomascus_annamensis.k141_1771965                       T 37 C 0
s Nomascus_concolor.k141_735679                               7127 3 -     16345 A-CC
i Nomascus_concolor.k141_735679                          T 37 C 0
s Nomascus_gabriellae.k141_57920                             13012 3 +     22201 A-CC
i Nomascus_gabriellae.k141_57920                         T 37 C 0
s Nomascus_siki_b.tarseq_93                            8411296 3 -  22158432 A-CC
i Nomascus_siki_b.tarseq_93                          T 37 C 0
s Nomascus_siki_a.k141_941534                                  23410 3 -     54323 A-CC
i Nomascus_siki_a.k141_941534                              T 37 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195938 3 +   9404916 a-cc
i Nyctereutes_procyonoides.CAJHUB010000658.1             T 37 C 0
s Nycticebus_bengalensis.LG01                             93632638 3 + 196305487 A-CC
i Nycticebus_bengalensis.LG01                            T 37 C 0
s Nycticebus_coucang.k141_8166032                             2027 3 +      2758 A-CC
i Nycticebus_coucang.k141_8166032                        T 37 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560892 3 - 199412804 A-CC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       T 37 C 0
s Octodon_degus.JH651603.1                                11044946 1 -  11899542 ---C
i Octodon_degus.JH651603.1                               T 35 C 0
s Odobenus_rosmarus.KB229312.1                             1449134 3 +   2017862 a-cc
i Odobenus_rosmarus.KB229312.1                           T 37 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    89918 3 -    140218 A-AA
i Ondatra_zibethicus.OndZib_scaffold_7387                T 39 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104752 3 +    107918 A-AC
i Onychomys_torridus.OnyTor_scaffold_2487                T 37 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11019 3 -     14239 g-cc
i Orycteropus_afer.OryAfe_flattened_line_171931          T 37 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36977 3 +    559221 a-cc
i Otocyon_megalotis.JAEUCK010005147.1                    T 37 C 0
s Otolemur_crassicaudatus.k141_649260                        36478 3 -     51505 A-CC
i Otolemur_crassicaudatus.k141_649260                    T 37 C 0
s Otolemur_garnettii.GL873799.1                             349492 3 +   1103335 A-CC
i Otolemur_garnettii.GL873799.1                          T 37 C 0
s Pan_troglodytes.CM009242.2                               1469281 3 - 189151597 a-cc
i Pan_troglodytes.CM009242.2                             C 0 I 447
s Panthera_onca.PanOnc_flattened_line_3271                   21892 3 -    230217 a-cc
i Panthera_onca.PanOnc_flattened_line_3271               T 37 C 0
s Panthera_pardus.KV860321.1                              18459218 3 -  18783137 a-cc
i Panthera_pardus.KV860321.1                             T 37 C 0
s Panthera_tigris.KE722367.1                               3969938 3 +   8748460 a-cc
i Panthera_tigris.KE722367.1                             T 37 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12552 3 +     78924 a-cc
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 T 37 C 0
s Perodicticus_ibeanus.k141_1921260                          22732 3 +     31479 A-CC
i Perodicticus_ibeanus.k141_1921260                      T 37 C 0
s Perodicticus_potto.k141_1854441                            15102 3 -     24908 A-CC
i Perodicticus_potto.k141_1854441                        T 37 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37372 3 +     38305 A-CT
i Perognathus_longimembris.PerPac_flattened_line_28053   T 83 C 0
s Peromyscus_maniculatus.KI615324.1                         244398 3 +  18517816 A-AC
i Peromyscus_maniculatus.KI615324.1                      T 36 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29626 1 -     56120 ---T
i Petromus_typicus.PetTyp_scaffold_17301                 T 35 C 0
s Piliocolobus_badius.k141_2495623                            6431 3 +      7560 A-CC
i Piliocolobus_badius.k141_2495623                       T 37 C 0
s Piliocolobus_gordonorum.k141_905727                        62139 3 -     63152 A-CC
i Piliocolobus_gordonorum.k141_905727                    T 37 C 0
s Piliocolobus_kirkii.k141_579682                            44738 3 +     45295 A-CC
i Piliocolobus_kirkii.k141_579682                        T 37 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2416 3 +      5735 A-CC
i Piliocolobus_tephrosceles.PDMG02034973.1               T 37 C 0
s Pithecia_albicans.k141_1239476                             62559 3 +    207309 A-CC
i Pithecia_albicans.k141_1239476                         T 37 C 0
s Pithecia_hirsuta.k141_640380                               29394 3 +     58159 A-CC
i Pithecia_hirsuta.k141_640380                           T 37 C 0
s Pithecia_mittermeieri.k141_1280039                         29670 3 +     63561 A-CC
i Pithecia_mittermeieri.k141_1280039                     T 37 C 0
s Pithecia_pissinattii.k141_878371                           29433 3 +     51148 A-CC
i Pithecia_pissinattii.k141_878371                       T 37 C 0
s Pithecia_vanzolinii.k141_1369553                           29417 3 +     51125 A-CC
i Pithecia_vanzolinii.k141_1369553                       T 37 C 0
s Plecturocebus_bernhardi.k141_2549090                        5848 3 +     39866 A-CC
i Plecturocebus_bernhardi.k141_2549090                   T 37 C 0
s Plecturocebus_brunneus.k141_862875                           933 3 -      9282 A-CC
i Plecturocebus_brunneus.k141_862875                     T 37 C 0
s Plecturocebus_caligatus.k141_1382851                       40337 3 -     87950 A-CC
i Plecturocebus_caligatus.k141_1382851                   T 37 C 0
s Plecturocebus_cinerascens.k141_1164729                     40730 3 -     88961 A-CC
i Plecturocebus_cinerascens.k141_1164729                 T 37 C 0
s Plecturocebus_cupreus.k141_2351393                          5429 3 -     39403 A-CC
i Plecturocebus_cupreus.k141_2351393                     T 37 C 0
s Plecturocebus_dubius.k141_1058799                          40383 3 +     87928 A-CC
i Plecturocebus_dubius.k141_1058799                      T 37 C 0
s Plecturocebus_grovesi.k141_2013005                          5426 3 -     60166 A-CC
i Plecturocebus_grovesi.k141_2013005                     T 37 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12362 3 -     67232 A-CC
i Plecturocebus_hoffmannsi.k141_3303950                  T 37 C 0
s Plecturocebus_miltoni.k141_349282                          40278 3 -     90634 A-CC
i Plecturocebus_miltoni.k141_349282                      T 37 C 0
s Plecturocebus_moloch.k141_1031110                          41746 3 +     89403 A-CC
i Plecturocebus_moloch.k141_1031110                      T 37 C 0
s Pongo_abelii.CM009266.2                                   174857 3 - 189387572 A-CC
i Pongo_abelii.CM009266.2                                T 333 C 0
s Pongo_pygmaeus.ctg66                                      189855 3 -   9816681 A-CC
i Pongo_pygmaeus.ctg66                                   T 115 C 0
s Presbytis_comata.k141_1230337                              24913 3 +     69807 A-CC
i Presbytis_comata.k141_1230337                          T 37 C 0
s Presbytis_mitrata.k141_584736                              42108 3 -     80239 a-cc
i Presbytis_mitrata.k141_584736                          T 37 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563731 3 -   2598838 A-CC
i Propithecus_coquerelli.NW_012148875.1                  T 36 C 0
s Propithecus_coronatus.k141_209299                           1367 3 -      7103 a-cc
i Propithecus_coronatus.k141_209299                      T 36 C 0
s Propithecus_diadema.k141_153680                             1964 3 -     11706 a-cc
i Propithecus_diadema.k141_153680                        T 36 C 0
s Propithecus_edwardsi.k141_635656                            5700 3 -     30655 a-cc
i Propithecus_edwardsi.k141_635656                       T 36 C 0
s Propithecus_perrieri.k141_1496898                          32025 3 +     46564 a-cc
i Propithecus_perrieri.k141_1496898                      T 36 C 0
s Propithecus_tattersalli.k141_1127767                       92296 3 -     98465 a-cc
i Propithecus_tattersalli.k141_1127767                   T 36 C 0
s Propithecus_verreauxi.k141_1047036                          5933 3 +     35169 a-cc
i Propithecus_verreauxi.k141_1047036                     T 36 C 0
s Pteronotus_parnellii.KE847780.1                            49565 3 -     66298 a-ct
i Pteronotus_parnellii.KE847780.1                        T 37 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2190 3 -     18639 a-cc
i Pteronura_brasiliensis.PteBra_flattened_line_48144     T 37 C 0
s Pteropus_alecto.KB030862.1                               5838533 3 -  28871421 A-CT
i Pteropus_alecto.KB030862.1                             T 37 C 0
s Pteropus_vampyrus.KN525825.1                             3535099 3 -   4952924 a-ct
i Pteropus_vampyrus.KN525825.1                           T 37 C 0
s Puma_concolor.QAVW01001104.1                            18096538 3 +  38429054 a-cc
i Puma_concolor.QAVW01001104.1                           T 37 C 0
s Pygathrix_cinerea.k141_1153803                             24304 3 +     91421 A-CC
i Pygathrix_cinerea.k141_1153803                         T 37 C 0
s Pygathrix_nigripes_b.ctg100                                  150797 3 -   7812017 A-CC
i Pygathrix_nigripes_b.ctg100                               T 37 C 0
s Pygathrix_nigripes_a.k141_215492                              5174 3 +     72585 A-CC
i Pygathrix_nigripes_a.k141_215492                         T 37 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911188 3 +   3329780 a-ct
i Rhinolophus_sinicus.LVEH01000134.1                     T 37 C 0
s Rhinopithecus_bieti.k119_221883                            26134 2 +     27361 --ct
i Rhinopithecus_bieti.k119_221883                        T 36 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119482 2 + 195417433 --CC
i Rhinopithecus_roxellana.NC_044550.1                    T 36 C 0
s Rhinopithecus_strykeri.ctg102                             233742 2 -   7961872 --cc
i Rhinopithecus_strykeri.ctg102                          T 36 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72516 3 -    116970 a-ct
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             T 37 C 0
s Saguinus_bicolor.k141_1429097                               1522 3 +     27962 A-CC
i Saguinus_bicolor.k141_1429097                          T 37 C 0
s Saguinus_geoffroyi.k141_3779887                             1530 3 +      6077 A-CC
i Saguinus_geoffroyi.k141_3779887                        T 37 C 0
s Saguinus_imperator.k141_1898058                             1549 3 +      5971 A-CC
i Saguinus_imperator.k141_1898058                        T 37 C 0
s Saguinus_inustus.k141_2469308                               1603 3 +      5932 A-CC
i Saguinus_inustus.k141_2469308                          T 37 C 0
s Saguinus_labiatus.k141_1571581                              1748 3 -      2099 A-CC
i Saguinus_labiatus.k141_1571581                         T 37 C 0
s Saguinus_midas.LG03                                       388870 3 - 209938924 A-CC
i Saguinus_midas.LG03                                    T 37 C 0
s Saguinus_mystax.k141_8077960                                1551 3 +      5979 A-CC
i Saguinus_mystax.k141_8077960                           T 37 C 0
s Saguinus_oedipus.k141_1466288                               1917 3 -      4301 A-CC
i Saguinus_oedipus.k141_1466288                          T 37 C 0
s Sapajus_apella.ctg103                                     236005 3 +   5703754 A-CC
i Sapajus_apella.ctg103                                  T 37 C 0
s Sapajus_macrocephalus.k141_796559                           5595 3 +     21866 A-CC
i Sapajus_macrocephalus.k141_796559                      T 37 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113725 4 +    313613 cccc
i Scalopus_aquaticus.ScaAqu_scaffold_662                 T 37 C 0
s Semnopithecus_entellus.k141_158471                         22621 3 +     27374 A-CC
i Semnopithecus_entellus.k141_158471                     T 37 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26140 3 +     58920 A-CC
i Semnopithecus_hypoleucos.k141_1910531                  T 37 C 0
s Semnopithecus_johnii.k141_843753                           12636 3 -     45317 A-CC
i Semnopithecus_johnii.k141_843753                       T 37 C 0
s Semnopithecus_priam.k141_714795                            20294 3 -     42441 A-CC
i Semnopithecus_priam.k141_714795                        T 37 C 0
s Semnopithecus_schistaceus.k141_1432920                     22974 3 -     29113 A-CC
i Semnopithecus_schistaceus.k141_1432920                 T 37 C 0
s Semnopithecus_vetulus.k141_244474                          26043 3 -     48123 A-CC
i Semnopithecus_vetulus.k141_244474                      T 37 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    45965 3 +     77746 A-AC
i Sigmodon_hispidus.SigHis_scaffold_20193                T 35 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856040 4 -   1910179 AAcc
i Solenodon_paradoxus.SolPar_flattened_line_126          T 38 C 0
s Spermophilus_dauricus.KZ294078.1                         1866012 3 +   3870691 A-CC
i Spermophilus_dauricus.KZ294078.1                       T 33 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4187 3 -     97271 a-cc
i Spilogale_gracilis.SpiGra_flattened_line_13525         T 37 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122241 3 +    196729 A-TC
i Suricata_suricatta.SurSur_flattened_line_6629          T 33 C 0
s Symphalangus_syndactylus.tarseq_199                       388268 3 +   1523678 A-CC
i Symphalangus_syndactylus.tarseq_199                    T 37 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 346 3 +      5583 A-cc
i Tamandua_tetradactyla.TamTet_scaffold_224794           T 36 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189063 3 +    199430 a-cc
i Tapirus_indicus.TapInd_scaffold_7432                   T 37 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103019 3 -    539355 a-cc
i Tapirus_terrestris.TapTer_scaffold_755                 T 37 C 0
s Tarsius_lariang.k141_1780720                                4718 3 +      6850 A-CC
i Tarsius_lariang.k141_1780720                           T 37 C 0
s Tarsius_wallacei.k141_226975                                4757 3 +     20590 A-CC
i Tarsius_wallacei.k141_226975                           T 37 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              21956 1 -     33621 ---C
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          T 35 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17466 3 -     31044 g-cc
i Tolypeutes_matacus.TolMat_scaffold_31955               T 37 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477383 3 -    610378 a-ct
i Tonatia_saurophila.TonSau_scaffold_294                 T 37 C 0
s Trachypithecus_auratus.k141_1189070                        18185 3 +     26378 A-CC
i Trachypithecus_auratus.k141_1189070                    T 37 C 0
s Trachypithecus_crepusculus.k141_539312                     30869 3 -     78344 A-CC
i Trachypithecus_crepusculus.k141_539312                 T 37 C 0
s Trachypithecus_cristatus.k141_180416                       17506 3 +     25722 A-CC
i Trachypithecus_cristatus.k141_180416                   T 37 C 0
s Trachypithecus_francoisi.k141_1453105                      25731 3 -     62838 A-CC
i Trachypithecus_francoisi.k141_1453105                  T 37 C 0
s Trachypithecus_geei.k141_1001272                           25848 3 +     46913 A-CC
i Trachypithecus_geei.k141_1001272                       T 37 C 0
s Trachypithecus_germaini.k141_57262                          6656 3 -     28527 A-CC
i Trachypithecus_germaini.k141_57262                     T 37 C 0
s Trachypithecus_hatinhensis.k141_31479                      27670 3 -     64340 A-CC
i Trachypithecus_hatinhensis.k141_31479                  T 37 C 0
s Trachypithecus_laotum.k141_928651                          25707 3 -     63452 A-CC
i Trachypithecus_laotum.k141_928651                      T 37 C 0
s Trachypithecus_leucocephalus.k141_96450                     7150 3 +     22490 A-CC
i Trachypithecus_leucocephalus.k141_96450                T 37 C 0
s Trachypithecus_melamera.k141_591572                          578 3 -      6147 A-CC
i Trachypithecus_melamera.k141_591572                    T 37 C 0
s Trachypithecus_obscurus.k141_848057                         7572 3 -     13050 a-cc
i Trachypithecus_obscurus.k141_848057                    T 37 C 0
s Trachypithecus_phayrei.ctg124                             252811 3 -   6242583 a-cc
i Trachypithecus_phayrei.ctg124                          T 37 C 0
s Trachypithecus_pileatus.k141_2862967                       58542 3 +     59866 A-CC
i Trachypithecus_pileatus.k141_2862967                   T 37 C 0
s Tupaia_chinensis.KB320699.1                              1831306 3 -   4065304 a-cc
i Tupaia_chinensis.KB320699.1                            T 37 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5822 3 -     70247 a-cc
i Tupaia_tana.TupTan_flattened_line_394                  T 37 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104951 4 -    105689 aacc
i Uropsilus_gracilis.UroGra_scaffold_7153                T 37 C 0
s Ursus_maritimus.KK499267.1                                179307 3 +   5085361 A-Tc
i Ursus_maritimus.KK499267.1                             T 37 C 0
s Varecia_rubra.k141_787544                                  22795 3 -     30710 A-GC
i Varecia_rubra.k141_787544                              T 36 C 0
s Varecia_variegata.k141_289850                              21702 3 -    147434 a-gc
i Varecia_variegata.k141_289850                          T 36 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102701 3 -    112863 a-cc
i Vulpes_lagopus.VulLag_flattened_line_12041             T 37 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171769 3 -    224448 A-ct
i Xerus_inauris.XerIna_scaffold_2302                     T 34 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26354 3 -     86975 a-cc
i Zalophus_californianus.ZalCal_flattened_line_17732     T 37 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1020 3 +      2695 A-TC
i Zapus_hudsonius.ZapHud_scaffold_230229                 T 28 I 11
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Allochrocebus_solatus.k141_3554717                         15445 27 +     32033 T
e Allochrocebus_preussi.k141_1993939                         13769 28 -     21945 T
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Theropithecus_gelada.CM009954.1                           350535 23 - 186847797 T
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377 18 +     22964 T
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Pithecia_pithecia.tarseq_165                              554439 27 -   4542175 T
e Pithecia_chrysocephala.k141_785207                          3692 27 -     25401 T
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564 46 +     22231 T
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Papio_ursinus.k141_2278143                                 19614 23 -     23640 T
e Papio_papio.k141_799093                                    12804 23 +     16796 T
e Papio_kindae.k141_2214839                                  19668 23 -     27687 T
e Papio_hamadryas.Contig39                                  288052 23 -  20919399 T
e Papio_cynocephalus.k141_1507553                             7013 23 +     21308 T
e Papio_anubis.CM001495.2                                   240549 23 - 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625 45 +   4330536 T
e Myotis_davidii.KB100139.1                                4384803 45 +   6019432 T
e Myotis_brandtii.KE162005.1                               9790404 45 +  10118263 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388 45 +     47283 T
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mirza_zaza.k141_766280                                     50085 18 -     62432 T
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Mandrillus_sphinx.Contig270                               354541 23 -    752769 T
e Mandrillus_leucophaeus.scaffold280                        319709 23 +  24302211 T
e Macaca_thibetana.k99_41370                                 19612 23 +     21031 T
e Macaca_fascicularis.k141_1397292                           19657 27 -     24934 T
e Macaca_cyclopis.k119_263443                                22554 23 +     30207 T
e Macaca_arctoides.k141_1757516                              42638 23 -     61512 T
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321 23 -   1826925 T
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517 45 -     65777 T
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12576040 45 +  14770903 T
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271 25 +  12879189 T
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cercopithecus_ascanius.k141_3120866                        25022 30 -     40656 T
e Cercocebus_torquatus.k141_2159127                          41924 23 -    148725 T
e Cercocebus_lunulatus.k141_2779015                          41941 23 -     44860 T
e Cercocebus_chrysogaster.k141_1522556                       42108 23 +     47900 T
e Cercocebus_atys.KQ010504.1                                138368 23 -   4669795 T
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2346 11 +     36723 atag---aat-----ta--ga
s Acinonyx_jubatus.LLWD01001279.1                           810279 11 +   1699592 acag---aaa-----ca--gg
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412800 11 +  29979442 atag---aag-----ca--ga
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15708  4 -     61208 ---------------CA--TA
i Allactaga_bullata.AllBul_scaffold_20030                I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45174 11 +     53615 acag---aat-----ta--aa
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41095 11 +     44087 ACAG---AAT-----TA--GA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13741  5 -     21945 ---------T-----TA--GA
i Allochrocebus_preussi.k141_1993939                     T 28 C 0
s Allochrocebus_solatus.k141_3554717                         15418  4 +     32033 ---------------TA--GA
i Allochrocebus_solatus.k141_3554717                     T 27 C 0
s Alouatta_belzebul.k141_1011583                             69882 11 -     84148 ATAG---AAT-----TA--GG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42111 11 -     78289 ATAG---AAT-----TA--GG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41561 11 +     55831 ATAG---AAT-----TA--GG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                39999 11 -     64179 ATAG---AAT-----TA--GG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21645 11 -     24835 ATAG---AAT-----TA--GG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38628 11 +     45454 ATAG---AAT-----TA--GG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44326 11 +     70886 ATAG---AAT-----TA--GG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6451 11 +     30854 ATAG---AAT-----TA--GG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30590 11 +     42133 GTAG---AAT-----TA--GG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174353  9 -    412891 gtag---aa-------a--ga
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Aotus_azarae.k141_118258                                   48405 11 -     65372 ACAG---AAT-----TA--GG
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42152 11 +     43593 ACAG---AAT-----TA--GG
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670165 11 +   5030052 ACAG---AAT-----TA--GG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21807 11 -     23494 ACAG---AAT-----TA--GG
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6943 11 +      8415 ACAG---AAT-----TA--GG
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13694  7 -     32367 acag---aaa-----------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 4
s Arctocebus_calabarensis.k141_1364444                       17316 11 -     45910 AGAG---AAA-----GA--AG
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2638  9 -     15198 gtag---aa-------a--ga
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 2
s Ateles_geoffroyi_b.tarseq_1536                               272389 11 +  21539123 ATAG---AAT-----TA--GG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8556 11 +     48076 ATAG---AAT-----TA--GG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3693 11 -     28759 ATAG---AAT-----TA--GG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31246 11 +     44353 ATAG---AAT-----TA--GG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46617 11 -     71267 ATAG---AAT-----TA--GG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20676 11 -     33135 ATAG---AAT-----TA--GG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3855 11 +     11645 acag---aaa-----ta--gg
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3856 11 -     19611 acag---aaa-----ta--gg
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5572 11 +     28062 GTAG---AAT-----TA--GG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40866 11 -     91139 GTAG---AAT-----TA--GG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18392 11 +     95584 GTAG---AAT-----TA--GG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18305 11 +    119600 GTAG---AAT-----TA--GG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7800 11 +     18648 GTAG---AAT-----TA--GG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7469  5 -     13885 ---------T-----TA--GG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16161 11 +     17162 GTAG---AAT-----TA--GG
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451116 11 + 189096842 GTAG---AAT-----TA--GG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17409 11 -     18408 GTAG---AAT-----TA--GG
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503070 11 +  60362399 atag---aaa-----ca--ga
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6706 11 -     23171 atag---aaa-----ca--ga
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220049 11 +   9314153 ATAG---AAA-----CA--GA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613184 11 +  59632846 atag---aaa-----ca--ga
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104765 11 -  63665305 atag---aaa-----ca--ga
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268029 11 +    496798 ACAG---CAA-----CA--GA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2709  9 +      5315 gtag---aa-------a--ga
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 2
s Castor_canadensis.CasCan_scaffold_39952                    20061 11 -     39886 acag---aaa-----ca--ga
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993623 11 +  23392119 ACAG---AAT-----CA--AG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997065 11 +  23407841 acag---aat-----ca--ag
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60166 11 -     66877 ACAG---AAT-----CA--AG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2695 11 -     12580 GTAG---AAT-----TA--GG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40581 11 +     53515 GTAG---AAT-----TA--GG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368784 11 -  26074798 ACAG---AAT-----TA--GG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5673 11 -     34880 ACAG---AAT-----TA--GG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64768 11 -     89041 ACAG---AAT-----TA--GG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1201 11 -      1636 ACAG---CAA-----CA--GA
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489813 11 -  27778364 atag---aaa-----ca--ga
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16646 11 +     27315 atag---aaa-----ca--ga
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        24992  7 -     40656 -------AAT-----TA--GA
i Cercopithecus_ascanius.k141_3120866                    T 30 C 0
s Cercopithecus_cephus.k141_4183004                           4957 11 +     20796 ACAG---AAT-----TA--GA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9147 11 -     17524 ACAG---AAT-----TA--GA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24869 11 -     34525 ACAG---AAT-----TA--GA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9578 11 -     25376 GCAG---AAT-----TA--GA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362177 11 -  39242232 ACAG---AAT-----TA--GA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267885 11 +  21565898 ACAG---AAT-----TA--GA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29346 11 -     45857 ACGG---AAT-----TA--GA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25166 11 -     32606 ACAG---AAT-----TA--GA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1319 11 +      8499 ACAG---AAT-----TA--GA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22838 11 +     70610 ACAC---AAT-----TA--CA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19763 11 +     36323 ACAG---AAT-----TA--GA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10461 11 -     19938 accg---aaa-----ca--ga
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28289 11 -     33796 ACAG---AAA-----TA--GG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2819 11 -     15404 acag---aaa-----ta--gg
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6680 11 -     32913 ATAG---AGT-----TA--GG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17093 11 -     40346 ATAG---AGT-----TA--GG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17357 11 +    216457 ATAG---AGT-----TA--GG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17141 11 +     39636 ATAG---AGT-----TA--GG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1527 11 +      5346 CTAG---AAT-----TA--GG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40212 11 -    112038 GTAG---AAT-----TA--GG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5784 11 +     34062 GTAG---AAT-----TA--GG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340660 11 +  18827391 ACAG---AAT-----TA--GA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7205 11 -     44032 ACAG---AAT-----TA--GA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301985 11 - 135778131 ACAG---AAT-----TA--GA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406439 11 -   2368649 ACAG---AAT-----TA--GA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376316 11 - 200372422 acag---aat-----ta--ga
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              6328 11 -      6605 ACAG---AAT-----TA--GA
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804951 10 +  53390261 -TCg---aaa-----ta--ga
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           393 11 -      8242 acag---aaa-----ta--ga
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 39972 11 -     83289 AAAT---AAA-----CA--GA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1570 11 +     87169 CTag---aaa-----ca--ga
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642514 12 -   1526836 ACAA--AAAT-----CA--GT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2593 11 +     50838 ACAG---AAT-----TT--GG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1245 11 +     36344 ACAG---GAT-----CA--GG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2107799 11 -   2246927 acag---aaa-----ta--gg
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290246  3 +  12879189 ----------------g--gc
i Daubentonia_madagascariensis.ctg71                     T 25 C 0
s Desmodus_rotundus.KZ672289.1                            11862382  9 -  20541912 gtag---aa-------a--gt
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662105 11 -   1390856 atag---aaa-----ca--ga
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136890 11 -    198055 atag---aaa-----ca--ga
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    95977 11 -    115145 ACAG---AAT-----CA--GG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948175 11 -  37912305 ATAG---AAA-----CA--GA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3122 11 -     10735 ATAG---AAA-----CA--GA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7573 10 +     14636 AGAG---AAT-----C---GG
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851314 14 - 111700974 acagacgaaa-----ca--ga
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               3942 11 +     19438 gtag---aaa-----tt--ga
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28205  7 +    110024 A-------AA-----GA--GA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10169  7 +     18970 a-------aa-----ga--GA
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913602 11 +  41312741 atag---aaa-----aa--ga
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039087 11 -   4378816 atgg---aaa-----ca--ga
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373021 11 +  39960074 atgg---aaa-----ca--ga
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409807 11 -    498745 atgg---aaa-----ca--ga
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260183 11 +  21539334 ACAG---AAT-----TA--GA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243944 11 - 206538554 ACAG---AAA-----CA--GG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185113726 11 - 205367284 ACAG---AAA-----CA--GG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25074 11 -     30238 acag---aaa-----ca--gg
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     121356 11 -    137831 AGAG---AAA-----GA--AG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4897 11 +     22493 AGAG---AAA-----GA--AG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16952 11 -     32986 AGAG---AAA-----GA--AG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16703 11 +     18121 acag---aaa-----ca--ga
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               2354 11 -      8343 atag---aat-----tg--ga
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251844 11 - 186649187 ATAG---AAT-----TA--GG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28079  6 -    327341 CTAG---AA------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Heterocephalus_glaber.JH602082.1                         1924673 11 -  22651954 acag---aat-----ta--gg
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547843 11 -   1711038 atag---aaa-----ga--ga
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47159 11 +     49977 atag---aaa-----ga--ga
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140111 11 -    630532 ATAG---AAT-----TA--GA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66556 11 +     83186 CTAG---AAC-----CG--GA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68915 11 +    143317 AAAG---AAT-----CA--GG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3146 11 +     12352 atag---aat-----ta--ga
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10329 11 +     55766 atag---aat-----ta--ga
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2049925 11 + 191637585 atag---aat-----ta--ga
i Hylobates_pileatus_b.LG02                                     I 477 T 477
s Hylobates_pileatus_a.tarseq_633                            7798803 11 +  11177569 ATAG---GAT-----TA--GA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384446  7 +   7955117 ACAG---AAA-----------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                    1353 11 -      1527 ACAG---AAA-----CA--GG
i Indri_indri.k141_4600452                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1236866  4 +   9596543 ---------------CA--TA
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Lagothrix_lagothricha.k141_246028                          40932 11 +    110728 GTAG---AAT-----TA--GG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1612 11 -     13097 CTAG---AAT-----TA--GG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1563 11 +      5940 CTAG---AAT-----TA--GG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1194 11 -      5717 ATAG---AAT-----TA--GG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7827 11 -     11567 GTAG---AAT-----TA--GG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9208 11 -     12945 GTAG---AAT-----TA--GG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6645 11 +     29618 ACAG---AAA-----TA--GG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6642 11 +     31569 ACAG---AAA-----TA--GG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6652 11 +     24756 acag---aaa-----ta--gg
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6646 11 +     16388 ACAG---AAA-----TA--GG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810952 11 -   3914936 atag---aaa-----ca--ga
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7350 11 +     19643 AGAG---AAA-----GA--AA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041010 11 -   6120653 AGAG---AAA-----GA--AA
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612339 11 +  59628241 atag---aaa-----ta--ga
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_assamensis.Contig5                                 370265 11 -  60120075 ACAG---AAT-----TA--GA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_fascicularis.k141_1397292                           19630  4 -     24934 ---------------TA--GA
i Macaca_fascicularis.k141_1397292                       T 27 C 0
s Macaca_fuscata.k119_546792                                 22472 11 +     30527 ACAG---AAT-----TA--GA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33662 11 -     50087 GCAG---AAT-----TA--GA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43433 11 +     51645 ACAG---AAT-----TA--GA
i Macaca_maura.k141_1103459                              I 33 C 0
s Macaca_mulatta.NC_041758.1                                412601 11 - 187317192 acag---aat-----ta--ga
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396824 11 +  25927173 GCAG---AAT-----TA--GA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45988 11 -     62418 ACAG---AAT-----TA--GA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22643 11 +     24253 ACAG---AAT-----TA--GA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42431 11 +     59329 GCAG---AAT-----TA--GA
i Macaca_siberu.k141_2185972                             C 0 I 33
s Macaca_silenus.Contig273                                  268397 11 +    668171 GCAG---AAT-----TA--GA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_tonkeana.k141_1880923                               33344 11 +     33478 GCAG---AAT-----TA--GA
i Macaca_tonkeana.k141_1880923                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220908 11 -    270270 gtag---aaa-----ca--gg
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Manis_javanica.JSZB01003497.1                             671187 11 -    737560 atag---aaa-----ta--ga
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218478 11 +    317179 atag---aaa-----ta--ga
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498645  7 +  40650429 acag---aaa-----------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148099  9 +    207569 acag---ag-------a--ga
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23475 11 -     74585 atag---aaa-----ga--ga
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mico_argentatus.k141_582562                                 7572 11 +     17804 GTAG---AAT-----TA--GG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8356 11 -     12984 GTAG---AAT-----TA--GG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16307 11 -     26561 GTAG---AAT-----TA--GG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982257 11 +  93316391 ACGG---AAA-----TA--GG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41633 11 +    145209 ACAG---AAA-----CA--GA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182325  7 +    200668 gcag---aa-------a----
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 2
s Miopithecus_ogouensis.k141_1534655                         19702 11 -     27822 ACAG---AAT-----TA--GA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5962 11 +     27589 atag---aaa-----ca--ga
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176502 11 +    366855 GTGG---aa-------ggaga
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15833  6 -     63510 CTAG---AA------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 1
s Mustela_putorius.JH418006.1                             14352415 11 +  14710649 atag---aag-----ga--ga
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117231 11 +    130748 acag---aaa-----ca--ga
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26283 11 +     34575 ACAG---AAT-----TA--GA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466349 11 -  31847680 atag---aaa-----ca--ga
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125145  4 -    149072 Gcag-----------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 1
s Nomascus_annamensis.k141_1771965                           51035 11 -    132029 ATAG---AAT-----TA--GA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7130 11 -     16345 ATAG---AAT-----TA--GA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13015 11 +     22201 ATAG---AAT-----TA--GA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411299 11 -  22158432 ATAG---AAT-----TA--GA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23413 11 -     54323 ATAG---AAT-----TA--GA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195941 11 +   9404916 atag---aaa-----ca--ga
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93632641 11 + 196305487 AGAG---AAA-----GA--AG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             2030 11 +      2758 AGAG---AAA-----GA--AG
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560895 11 - 199412804 AGAG---AAA-----GA--AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11044947 11 -  11899542 ACAG---AAT-----TT--GG
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449137 11 +   2017862 atag---aaa-----ca--ga
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    89921 12 -    140218 A-------AAAGAGACA--GA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104755 11 +    107918 AAAG---AAA-----CA--GA
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11022 11 -     14239 acag---aaa-----ca--ga
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36980 11 +    559221 atag---aaa-----ca--ga
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        36481 11 -     51505 AGAG---AAA-----GA--AG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             349495 11 +   1103335 AGAG---AAA-----GA--AG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1469731 11 - 189151597 atag---aat-----ta--ga
i Pan_troglodytes.CM009242.2                             I 447 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21895 11 -    230217 acag---aaa-----ca--gg
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459221 11 -  18783137 acag---aaa-----ca--gg
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3969941 11 +   8748460 agag---aaa-----ca--gg
i Panthera_tigris.KE722367.1                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12555 11 +     78924 atag---aaa-----ca--ga
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22735 11 +     31479 AGAG---AAA-----GA--AG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            15105 11 -     24908 AGAG---AAA-----GA--AG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37375 11 +     38305 ATAG---AAA-----CA--CA
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244401 11 +  18517816 AAAG---AAA-----CA--GA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29627 11 -     56120 ACAC---AGT-----CA--GG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6434 11 +      7560 ACAG---AAT-----TA--GA
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62142 11 -     63152 ACAG---AAT-----TA--GA
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44741 11 +     45295 ACAG---AAT-----TA--GA
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2419 11 +      5735 ACAG---AAT-----TA--GA
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62562 11 +    207309 ACAG---AAT-----TA--GG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3665  4 -     25401 ---------------TA--GG
i Pithecia_chrysocephala.k141_785207                     T 27 C 0
s Pithecia_hirsuta.k141_640380                               29397 11 +     58159 ACAG---AAT-----TA--GG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29673 11 +     63561 ACAG---AAT-----TA--GG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29436 11 +     51148 ACAG---AAT-----TA--GG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554412  4 -   4542175 ---------------TA--GG
i Pithecia_pithecia.tarseq_165                           T 27 C 0
s Pithecia_vanzolinii.k141_1369553                           29420 11 +     51125 ACAG---AAT-----TA--GG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5851 11 +     39866 ATAG---AGT-----TA--GG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           936 11 -      9282 ATAG---AGT-----TA--GG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40340 11 -     87950 ATAG---AGT-----TA--GG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40733 11 -     88961 ATAG---AGT-----TA--GG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5432 11 -     39403 ATAG---AGT-----TA--GG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40386 11 +     87928 ATAG---AGT-----TA--GG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5429 11 -     60166 ATAG---AGT-----TA--GG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12365 11 -     67232 ATAG---AGT-----TA--GG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40281 11 -     90634 ATAG---AGT-----TA--GG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41749 11 +     89403 ATAG---AGT-----TA--GG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174860 11 - 189387572 ATAG---AAT-----TA--GG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189858 11 -   9816681 ATAG---AAT-----TA--GG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24916 11 +     69807 ACAG---AAT-----TA--GA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42111 11 -     80239 acag---aat-----ta--ga
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563734 11 -   2598838 ACAG---AAA-----TA--GG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1370 11 -      7103 acag---aaa-----ta--gg
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1967 11 -     11706 acag---aaa-----ta--tg
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5703 11 -     30655 aaag---aaa-----ta--gg
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32028 11 +     46564 acag---aaa-----ta--tg
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92299 11 -     98465 acag---aaa-----ta--gg
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5936 11 +     35169 acag---aaa-----ta--gg
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49568 11 -     66298 gtag---aa-------agaga
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2193 11 -     18639 atag---aaa-----ga--ga
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838536 11 -  28871421 GTag---aaa-----ta--ga
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535102 11 -   4952924 gtag---aaa-----ta--ga
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096541 11 +  38429054 acag---aaa-----ca--gg
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24307 11 +     91421 ACAG---AAT-----TA--GA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150800 11 -   7812017 ACAG---AAT-----TA--GA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5177 11 +     72585 ACAG---AAT-----TA--GA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911191 11 +   3329780 gtag---aaa-----ga--ga
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26136 11 +     27361 acag---aat-----ta--ga
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119484 11 + 195417433 ACAG---AAT-----TA--GA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233744 11 -   7961872 acag---aat-----ta--ga
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72519 11 -    116970 gtag---aaa-----ta--ga
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1525 11 +     27962 CTAG---AAT-----TA--GG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1533 11 +      6077 CTAG---AAT-----TA--GG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1552 11 +      5971 CTAG---AAT-----TA--GG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1606 11 +      5932 CTAG---AAT-----TA--GG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1751 11 -      2099 CTAG---AAT-----TA--GG
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388873 11 - 209938924 CTAG---AAT-----TA--GG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1554 11 +      5979 CTAG---AAT-----TA--GG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1920 11 -      4301 CTAG---AAT-----TA--GG
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236008 11 +   5703754 ACAG---AAT-----TA--GG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5598 11 +     21866 ACAG---AAT-----TA--GG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113729 10 +    313613 -tag---aaa-----ta--ga
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22624 11 +     27374 ACAG---AAT-----TA--GA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26143 11 +     58920 ACAG---AAT-----TA--GA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12639 11 -     45317 ACAG---AAT-----TA--GA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20297 11 -     42441 ACAG---AAT-----TA--GA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22977 11 -     29113 ACAG---AAT-----TA--GA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26046 11 -     48123 ACAG---AAT-----TA--GA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    45968  9 +     77746 AAAG---AAA-----C----A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856044 11 -   1910179 acag---caa-----ta--ga
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866015  7 +   3870691 ACAG---AAA-----------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4190 11 -     97271 atag---aaa-----ca--ga
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122244  6 +    196729 CTAG---AA------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Symphalangus_syndactylus.tarseq_199                       388271 11 +   1523678 ATAG---AAT-----TA--GA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 349 11 +      5583 acag---aaa-----ca--ga
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189066 11 +    199430 atag---aaa-----ca--ga
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103022 11 -    539355 atag---aaa-----ca--ga
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4721 11 +      6850 ACAG---CAA-----CA--GA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4760 11 +     20590 ACAG---CAA-----CA--GA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              21957 11 -     33621 AAAG---AAG-----CA--GG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17469 11 -     31044 accg---aaa-----ca--ga
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477386  9 -    610378 gcag---aa-------a--gg
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_1189070                        18188 11 +     26378 ACAG---AAT-----TA--GA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30872 11 -     78344 ACAG---AAT-----TA--GA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17509 11 +     25722 ACAG---AAT-----TA--GA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25734 11 -     62838 ACAG---AAT-----TA--GA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25851 11 +     46913 ACAG---AAT-----TA--GA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6659 11 -     28527 ACAG---AAT-----TA--GA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27673 11 -     64340 ACAG---AAT-----TA--GA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25710 11 -     63452 ACAG---AAT-----TA--GA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7153 11 +     22490 ACAG---AAT-----TA--GA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          581 11 -      6147 ACAG---AAT-----TA--GA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7575 11 -     13050 acag---aat-----ta--ga
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252814 11 -   6242583 acag---aat-----ta--ga
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58545 11 +     59866 ACAG---AAT-----TA--GA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831309 11 -   4065304 acag---tca-----ca--ga
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5825 11 -     70247 acag---cca-----ca--ga
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104955 10 -    105689 -taa---aaa-----ta--ga
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179310 11 +   5085361 atag---aag-----ca--ga
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22798 11 -     30710 ACAG---AAA-----TA--GG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21705 11 -    147434 acag---aaa-----ta--gg
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102704 11 -    112863 atag---aaa-----ca--ga
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171772  7 -    224448 acag---aaa-----------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26357 11 -     86975 atag---aaa-----ca--ga
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_211135                      1034 11 +      3117 ATAG---AAA-----CA--GA
i Zapus_hudsonius.ZapHud_scaffold_211135                 T 11 I 101
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Theropithecus_gelada.CM009954.1                           350535 23 - 186847797 T
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377 18 +     22964 T
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564 46 +     22231 T
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Papio_ursinus.k141_2278143                                 19614 23 -     23640 T
e Papio_papio.k141_799093                                    12804 23 +     16796 T
e Papio_kindae.k141_2214839                                  19668 23 -     27687 T
e Papio_hamadryas.Contig39                                  288052 23 -  20919399 T
e Papio_cynocephalus.k141_1507553                             7013 23 +     21308 T
e Papio_anubis.CM001495.2                                   240549 23 - 183742232 T
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625 45 +   4330536 T
e Myotis_davidii.KB100139.1                                4384803 45 +   6019432 T
e Myotis_brandtii.KE162005.1                               9790404 45 +  10118263 T
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388 45 +     47283 T
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50085 18 -     62432 T
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Mandrillus_sphinx.Contig270                               354541 23 -    752769 T
e Mandrillus_leucophaeus.scaffold280                        319709 23 +  24302211 T
e Macaca_thibetana.k99_41370                                 19612 23 +     21031 T
e Macaca_cyclopis.k119_263443                                22554 23 +     30207 T
e Macaca_arctoides.k141_1757516                              42638 23 -     61512 T
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321 23 -   1826925 T
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517 45 -     65777 T
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Eptesicus_fuscus.JH977646.1                             12576040 45 +  14770903 T
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cercocebus_torquatus.k141_2159127                          41924 23 -    148725 T
e Cercocebus_lunulatus.k141_2779015                          41941 23 -     44860 T
e Cercocebus_chrysogaster.k141_1522556                       42108 23 +     47900 T
e Cercocebus_atys.KQ010504.1                                138368 23 -   4669795 T
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2357 6 +     36723 t---ggctt
s Acinonyx_jubatus.LLWD01001279.1                           810290 6 +   1699592 t---ggcta
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412811 6 +  29979442 c---tgctg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15712 6 -     61208 C---TACTT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 2
s Allenopithecus_nigroviridis.k141_3755588                   45185 6 +     53615 t---ggctt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41106 6 +     44087 T---GGCTT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13746 6 -     21945 T---GGCTT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15422 6 +     32033 T---GGCTT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69893 6 -     84148 T---GGTTT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42122 6 -     78289 T---GGTTT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41572 6 +     55831 T---GGTTT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40010 6 -     64179 T---GGTTT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21656 6 -     24835 T---GGTTT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38639 6 +     45454 T---GGTTT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44337 6 +     70886 T---GGTTT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6462 6 +     30854 T---GGTTT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30601 6 +     42133 T---GGTTT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174364 6 -    412891 c---cagtt
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 C 0
s Aotus_azarae.k141_118258                                   48416 6 -     65372 T---GGTTT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42163 6 +     43593 T---GGTTT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670176 6 +   5030052 T---GGTTT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21818 6 -     23494 T---GGTTT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6954 6 +      8415 T---GGTTT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13705 6 -     32367 c---taatc
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 4 C 0
s Arctocebus_calabarensis.k141_1364444                       17327 6 -     45910 C---TGTTT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2649 6 -     15198 c---cagtg
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 2 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272400 6 +  21539123 T---GGTTT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8567 6 +     48076 T---GGTTT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3704 6 -     28759 T---GGTTT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31257 6 +     44353 T---GGTTT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46628 6 -     71267 T---GGTTT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20687 6 -     33135 T---GGTTT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3866 5 +     11645 ----tgctt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3867 5 -     19611 ----tgctt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5583 6 +     28062 T---GGTTT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40877 6 -     91139 T---GGTTT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18403 6 +     95584 T---GGTTT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18316 6 +    119600 T---GGTTT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7811 6 +     18648 T---GGTTT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7474 6 -     13885 T---GGTTT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16172 6 +     17162 T---GGTGT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451127 6 + 189096842 T---GGTTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17420 6 -     18408 T---GGTTT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503081 6 +  60362399 c---tgctg
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6717 6 -     23171 c---tgctg
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220060 6 +   9314153 C---TGCTG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613195 6 +  59632846 c---tgctg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104776 6 -  63665305 c---tgctg
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268040 6 +    496798 C---TGCTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2720 6 +      5315 c---cagtt
i Carollia_perspicillata.CarPer_scaffold_170178          I 2 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20072 6 -     39886 t---tgctc
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993634 6 +  23392119 C---TACTC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997076 6 +  23407841 c---tactc
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60177 6 -     66877 C---TACTC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2706 6 -     12580 T---GGTTT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40592 6 +     53515 T---GGTTT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368795 6 -  26074798 T---GGTTT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5684 6 -     34880 T---GGTTT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64779 6 -     89041 T---GGTTT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1212 6 -      1636 C---TGCTT
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489824 6 -  27778364 t---tgctt
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16657 6 +     27315 t---tgctt
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138345 6 -   4669795 T---GGCTT
i Cercocebus_atys.KQ010504.1                             T 23 C 0
s Cercocebus_chrysogaster.k141_1522556                       42085 6 +     47900 T---GGCTT
i Cercocebus_chrysogaster.k141_1522556                   T 23 C 0
s Cercocebus_lunulatus.k141_2779015                          41918 6 -     44860 T---GGCTT
i Cercocebus_lunulatus.k141_2779015                      T 23 C 0
s Cercocebus_torquatus.k141_2159127                          41901 6 -    148725 T---GGCTT
i Cercocebus_torquatus.k141_2159127                      T 23 C 0
s Cercopithecus_ascanius.k141_3120866                        24999 6 -     40656 T---GGCTT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4968 6 +     20796 T---GGCTT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9158 6 -     17524 T---GGCTT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24880 6 -     34525 T---GGCTT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9589 6 -     25376 T---GGCTT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362188 6 -  39242232 T---GGCTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267896 6 +  21565898 T---GGCTT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29357 6 -     45857 T---GGCTT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25177 6 -     32606 T---GGCTT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1330 6 +      8499 T---GGCTT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22849 6 +     70610 T---GGCTT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19774 6 +     36323 T---GGCTT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10472 6 -     19938 c---tgttt
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28300 5 -     33796 ----TGCTT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2830 5 -     15404 ----tgctt
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6691 6 -     32913 T---GGGTT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17104 6 -     40346 T---GGGTT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17368 6 +    216457 T---GGGTT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17152 6 +     39636 T---GGGTT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1538 6 +      5346 T---GGTTT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40223 6 -    112038 T---GGTTT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5795 6 +     34062 T---GGTTT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340671 6 +  18827391 T---GGCTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7216 6 -     44032 T---GGCTT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            301996 6 - 135778131 T---GGCTT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406450 6 -   2368649 T---GGTTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376327 6 - 200372422 t---ggttt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              6339 6 -      6605 T---GGTTT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804961 6 +  53390261 c---tacat
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           404 6 -      8242 c---tgacc
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 39983 6 -     83289 C---AACTC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1581 6 +     87169 c---agctg
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642526 6 -   1526836 C---TATTC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2604 6 +     50838 C---TACTC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1256 6 +     36344 A---TACTC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2107810 6 -   2246927 c---tgctt
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290249 5 +  12879189 ----tgctt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662116 6 -   1390856 t---tgctt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136901 6 -    198055 t---tgctt
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    95988 6 -    115145 C---TATTC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948186 6 -  37912305 T---TACTC
i Dipodomys_ordii.KN672350.1                             C 0 I 59
s Dipodomys_stephensi.DipSte_scaffold_89095                   3133 6 -     10735 T---TACTC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 59
s Dolichotis_patagonum.DolPat_scaffold_80628                  7583 6 +     14636 T---TACTC
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851328 6 - 111700974 t---tgctt
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               3953 6 +     19438 c---tgctt
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28212 6 +    110024 T---TACTC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10176 6 +     18970 T---TACTC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913613 6 +  41312741 t---tgctg
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12575995 1 +  14770903 --------t
i Eptesicus_fuscus.JH977646.1                            T 45 C 0
s Equus_asinus.JREZ01000139.1                              3039098 5 -   4378816 t---ta-tt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373032 5 +  39960074 t---ta-tt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409818 5 -    498745 t---ta-tt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260194 6 +  21539334 T---GGCTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243955 6 - 206538554 T---GGCTA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185113737 6 - 205367284 T---GGCTA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25085 6 -     30238 t---ggcta
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     121367 6 -    137831 C---TGCTT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4908 6 +     22493 C---TGCTT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16963 6 -     32986 T---TGCTT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16714 6 +     18121 c---cgctt
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               2365 6 -      8343 t---ggatt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251855 6 - 186649187 T---GGCTT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28086 6 -    327341 C---AGCTA
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Heterocephalus_glaber.JH602082.1                         1924684 6 -  22651954 c---tactc
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547854 6 -   1711038 t---tgctt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47170 6 +     49977 t---tgctt
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140122 6 -    630532 T---GGCTT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66567 6 +     83186 C---AGCTG
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68926 6 +    143317 C---TACTC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3157 6 +     12352 t---ggctt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10340 6 +     55766 t---ggctt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2049459 6 + 191637585 t---ggctt
i Hylobates_pileatus_b.LG02                                     T 477 C 0
s Hylobates_pileatus_a.tarseq_633                            7798814 6 +  11177569 T---TGCTT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384453 6 +   7955117 C---TACTC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                    1364 5 -      1527 ----TGCTT
i Indri_indri.k141_4600452                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1236870 6 +   9596543 C---TACTG
i Jaculus_jaculus.JH725527.1                             C 0 I 2
s Lagothrix_lagothricha.k141_246028                          40943 6 +    110728 T---GGTTT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59472 1 -     65777 --------t
i Lasiurus_borealis.LasBor_scaffold_16567                T 45 C 0
s Leontocebus_fuscicollis.k141_2994775                        1623 6 -     13097 T---GGTTT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1574 6 +      5940 T---GGTTT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1205 6 -      5717 T---GGTTT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7838 6 -     11567 T---GGTTT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9219 6 -     12945 T---GGTTT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6656 5 +     29618 ----TGCTT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6653 5 +     31569 ----TGCTT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6663 5 +     24756 ----tgctt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6657 5 +     16388 ----TGCTT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810963 6 -   3914936 c---tgctg
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               330298 6 -   1826925 T---GGCTT
i Lophocebus_aterrimus.ctg367                            T 23 C 0
s Loris_lydekkerianus.k141_2031736                            7361 6 +     19643 C---TTCTT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041021 6 -   6120653 C---TTCTT
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612350 6 +  59628241 c---tgctg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42615 6 -     61512 T---GGCTT
i Macaca_arctoides.k141_1757516                          T 23 C 0
s Macaca_assamensis.Contig5                                 370276 6 -  60120075 T---GGCTT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22531 6 +     30207 T---GGCTT
i Macaca_cyclopis.k119_263443                            T 23 C 0
s Macaca_fascicularis.k141_1397292                           19634 6 -     24934 T---GGCTT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22483 6 +     30527 T---GGCTT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33673 6 -     50087 T---GGCTT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43444 6 +     51645 T---GGCTT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412612 6 - 187317192 t---GGCTT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396835 6 +  25927173 T---GGCTT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  45999 6 -     62418 T---GGCTT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22654 6 +     24253 T---GGCTT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42475 6 +     59329 T---GGCTT
i Macaca_siberu.k141_2185972                             I 33 C 0
s Macaca_silenus.Contig273                                  268408 6 +    668171 T---GGCTT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19589 6 +     21031 T---GGCTT
i Macaca_thibetana.k99_41370                             T 23 C 0
s Macaca_tonkeana.k141_1880923                               33355 9 +     33478 TACAGTCTT
i Macaca_tonkeana.k141_1880923                           C 0 n 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220919 6 -    270270 c---tgctt
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319686 6 +  24302211 T---GGCTT
i Mandrillus_leucophaeus.scaffold280                     T 23 C 0
s Mandrillus_sphinx.Contig270                               354518 6 -    752769 T---GGCTT
i Mandrillus_sphinx.Contig270                            T 23 C 0
s Manis_javanica.JSZB01003497.1                             671198 6 -    737560 c---tgctt
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218489 6 +    317179 c---tgctt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498652 6 +  40650429 c---taccc
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148108 6 +    207569 c---tcctg
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23486 6 -     74585 t---tgctg
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mico_argentatus.k141_582562                                 7583 6 +     17804 T---GGTTT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8367 6 -     12984 T---GGTTT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16318 6 -     26561 T---GGTTT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982268 5 +  93316391 ----CGCTT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41644 6 +    145209 T---TGTTT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182334 6 +    200668 c---ctcct
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 2 C 0
s Miopithecus_ogouensis.k141_1534655                         19713 6 -     27822 T---GGCTT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5973 6 +     27589 c---tgctg
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50067 2 -     62432 -------tt
i Mirza_zaza.k141_766280                                 T 18 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176513 6 +    366855 c---cgctt
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15840 6 -     63510 C---AGCTG
i Mungos_mungo.MunMun_flattened_line_18455               I 1 C 0
s Murina_feae.MurFea_scaffold_17764                          36343 1 +     47283 --------c
i Murina_feae.MurFea_scaffold_17764                      T 45 C 0
s Mustela_putorius.JH418006.1                             14352426 6 +  14710649 t---tgctg
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790359 1 +  10118263 --------t
i Myotis_brandtii.KE162005.1                             T 45 C 0
s Myotis_davidii.KB100139.1                                4384758 1 +   6019432 --------t
i Myotis_davidii.KB100139.1                              T 45 C 0
s Myotis_lucifugus.GL429869.1                               380580 1 +   4330536 --------t
i Myotis_lucifugus.GL429869.1                            T 45 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117242 5 +    130748 ----tgctt
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26294 6 +     34575 T---GGCTT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466360 6 -  31847680 c---tgctg
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125150 6 -    149072 c---tactt
i Noctilio_leporinus.NocLep_scaffold_7894                I 1 C 0
s Nomascus_annamensis.k141_1771965                           51046 6 -    132029 T---GGCTT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7141 6 -     16345 T---GGCTT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13026 6 +     22201 T---GGCTT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411310 6 -  22158432 T---GGCTT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23424 6 -     54323 T---GGCTT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195952 6 +   9404916 c---tgctg
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93632652 6 + 196305487 C---TGCTT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             2041 6 +      2758 C---TGCTT
i Nycticebus_coucang.k141_8166032                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560906 6 - 199412804 C---TGCTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11044958 6 -  11899542 C---TActc
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449148 6 +   2017862 c---tgctg
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    89933 6 -    140218 T---TACTC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104766 6 +    107918 T---TACTA
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11033 6 -     14239 t---tgcct
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        36991 6 +    559221 c---tgctg
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        36492 6 -     51505 C---TGCTT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             349506 6 +   1103335 C---TGCTT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1469742 6 - 189151597 t---ggctt
i Pan_troglodytes.CM009242.2                             C 0 I 22
s Panthera_onca.PanOnc_flattened_line_3271                   21906 6 -    230217 t---ggcta
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459232 6 -  18783137 t---ggcta
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3969952 6 +   8748460 t---ggcta
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240526 6 - 183742232 T---GGCTT
i Papio_anubis.CM001495.2                                T 23 C 0
s Papio_cynocephalus.k141_1507553                             6990 6 +     21308 T---GGCTT
i Papio_cynocephalus.k141_1507553                        T 23 C 0
s Papio_hamadryas.Contig39                                  288029 6 -  20919399 T---GGCTT
i Papio_hamadryas.Contig39                               T 23 C 0
s Papio_kindae.k141_2214839                                  19645 6 -     27687 T---GGCTT
i Papio_kindae.k141_2214839                              T 23 C 0
s Papio_papio.k141_799093                                    12781 6 +     16796 T---GGCTT
i Papio_papio.k141_799093                                T 23 C 0
s Papio_ursinus.k141_2278143                                 19591 6 -     23640 T---GGCTT
i Papio_ursinus.k141_2278143                             T 23 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12566 6 +     78924 c---agctg
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22746 6 +     31479 C---TGCTT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            15116 6 -     24908 C---TGCTT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37386 6 +     38305 T---TACTC
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 I 60
s Peromyscus_maniculatus.KI615324.1                         244412 5 +  18517816 T---T-CTC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29638 6 -     56120 C---TATTC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6445 6 +      7560 T---GGCTT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62153 6 -     63152 T---GGCTT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44752 6 +     45295 T---GGCTT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2430 6 +      5735 T---GGCTT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              518 1 +     22231 --------t
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        T 46 C 0
s Pithecia_albicans.k141_1239476                             62573 6 +    207309 T---GGTTT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3669 6 -     25401 T---GGTTT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29408 6 +     58159 T---GGTTT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29684 6 +     63561 T---GGTTT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29447 6 +     51148 T---GGTTT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554416 6 -   4542175 T---GGTTT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29431 6 +     51125 T---GGTTT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5862 6 +     39866 T---GGGTT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           947 6 -      9282 T---GGGTT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40351 6 -     87950 T---GGGTT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40744 6 -     88961 T---GGGTT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5443 6 -     39403 T---GGGTT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40397 6 +     87928 T---GGGTT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5440 6 -     60166 T---GGGTT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12376 6 -     67232 T---GGGTT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40292 6 -     90634 T---GGGTT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41760 6 +     89403 T---GGGTT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174871 6 - 189387572 T---GGCTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189869 6 -   9816681 T---GGCTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24927 6 +     69807 T---GGCTT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42122 6 -     80239 t---ggctt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563745 5 -   2598838 ----TGCTT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1381 5 -      7103 ----tgctt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1978 5 -     11706 ----tgctt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5714 5 -     30655 ----tgctt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32039 5 +     46564 ----tgctt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92310 5 -     98465 ----tgctt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5947 5 +     35169 ----tgctt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49579 6 -     66298 c---cactg
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2204 6 -     18639 t---tgctg
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838547 6 -  28871421 c---tgttt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535113 6 -   4952924 c---tgttt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096552 6 +  38429054 t---ggcta
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24318 6 +     91421 T---GGCTT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150811 6 -   7812017 T---GGCTT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5188 6 +     72585 T---GGCTT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911202 6 +   3329780 c---tgctt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26147 6 +     27361 t---ggctt
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119495 6 + 195417433 T---GGCTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233755 6 -   7961872 t---ggctt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72530 6 -    116970 c---tgctt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1536 6 +     27962 T---GGTTT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1544 6 +      6077 T---GGTTT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1563 6 +      5971 T---GGTTT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1617 6 +      5932 T---GGTTT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1762 6 -      2099 T---GGTTT
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388884 6 - 209938924 T---GGTTT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1565 6 +      5979 T---GGTTT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1931 6 -      4301 T---GGTTT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236019 6 +   5703754 T---GGTTT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5609 6 +     21866 T---GGTTT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113739 6 +    313613 c---tgctt
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22635 6 +     27374 T---GGCTT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26154 6 +     58920 T---GGCTT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12650 6 -     45317 T---GGCTT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20308 6 -     42441 T---GGCTT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22988 6 -     29113 T---GGCTT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26057 6 -     48123 T---GGCTT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    45977 6 +     77746 T---TCCTC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856055 6 -   1910179 c---cactt
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866022 6 +   3870691 C---TACTC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4201 6 -     97271 c---cgctg
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122251 6 +    196729 C---AGCTG
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Symphalangus_syndactylus.tarseq_199                       388282 6 +   1523678 T---GGCTT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11359 1 +     22964 --------t
i Tadarida_brasiliensis.TadBra_scaffold_54991            T 18 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 360 5 +      5583 ----tgctt
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189077 6 +    199430 c---tgctt
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103033 6 -    539355 c---tgctt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4732 6 +      6850 C---TGCTT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4771 6 +     20590 C---TGCTT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350512 6 - 186847797 T---GGCTT
i Theropithecus_gelada.CM009954.1                        T 23 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              21968 6 -     33621 C---TACTC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17480 6 -     31044 c---tgttt
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477397 6 -    610378 c---cagtt
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 C 0
s Trachypithecus_auratus.k141_1189070                        18199 6 +     26378 T---GGCTT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30883 6 -     78344 T---GGCTT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17520 6 +     25722 T---GGCTT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25745 6 -     62838 T---GGCTT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25862 6 +     46913 T---GGCTT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6670 6 -     28527 T---GGCTT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27684 6 -     64340 T---GGCTT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25721 6 -     63452 T---GGCTT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7164 6 +     22490 T---GGCTT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          592 6 -      6147 T---GGCTT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7586 6 -     13050 t---ggctt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252825 6 -   6242583 t---ggctt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58556 6 +     59866 T---GGCTT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831320 6 -   4065304 c---cgctt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5836 6 -     70247 c---tgctt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104965 6 -    105689 c---tgctt
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179321 6 +   5085361 c---tgctg
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22809 5 -     30710 ----TGCTT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21716 5 -    147434 ----tgctt
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102715 6 -    112863 c---tgctg
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171779 7 -    224448 c--atacta
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26368 6 -     86975 c---tgctg
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1034 6 +      2695 T---GACTA
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 11 I 2
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862391 0 -  20541912 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2363 22 +     36723 c----------------------------t-gcaga-ta--------cggct-aaatcttc
s Acinonyx_jubatus.LLWD01001279.1                           810296 17 +   1699592 c----------------------------t-gcaaa-ta--------gggct-aat-----
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412817 17 +  29979442 c----------------------------t-gcaga-ta--------tggct-aat-----
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15720  7 -     61208 -------------------------------------------------GAAAATT-----
i Allactaga_bullata.AllBul_scaffold_20030                I 2 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45191 17 +     53615 c----------------------------t-gcaaa-ta--------cagct-aag-----
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41112 17 +     44087 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13752 17 -     21945 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15428 17 +     32033 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69899 17 -     84148 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42128 17 -     78289 C----------------------------T-GCAAA-TA--------CAGCT-CAG-----
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41578 17 +     55831 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40016 17 -     64179 C----------------------------T-GCAAA-TA--------CAGCT-CAG-----
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21662 17 -     24835 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38645 17 +     45454 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44343 17 +     70886 C----------------------------T-GCAAA-TA--------CGACT-CAG-----
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6468 17 +     30854 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30607 17 +     42133 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174370 17 -    412891 c----------------------------t-gcaaa-ta--------cagct-aaa-----
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48422 17 -     65372 C----------------------------T-GCAAA-TA--------TGGCT-CAG-----
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42169 17 +     43593 C----------------------------T-GCAAA-TA--------TGGCT-CAG-----
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670182 17 +   5030052 C----------------------------T-GCAAA-TA--------TGGCT-CAG-----
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21824 17 -     23494 C----------------------------T-GCAAA-TA--------TGGCT-CAG-----
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6960 17 +      8415 C----------------------------T-GCAAA-TA--------TGGCT-CAG-----
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13711 21 -     32367 c----------------------------t-gcaaa-ta----aatgtgact-aat-----
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       17333 17 -     45910 C----------------------------T-GCAAA-TA--------TGGCT-AAG-----
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2655 17 -     15198 c----------------------------t-gcaat-ta--------cagat-aag-----
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272406 17 +  21539123 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8573 17 +     48076 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3710 17 -     28759 C----------------------------T-GCAAA-TA--------TAGCT-CAG-----
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31263 17 +     44353 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46634 17 -     71267 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20693 17 -     33135 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3871 17 +     11645 c----------------------------t-aaaaa-ta--------tggct-aat-----
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3872 17 -     19611 c----------------------------t-aaaaa-ta--------tggct-aat-----
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5589 17 +     28062 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40883 17 -     91139 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18409 17 +     95584 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18322 17 +    119600 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7817 17 +     18648 C----------------------------T-GCAAA-TA--------CGGCT-CGG-----
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7480 17 -     13885 C----------------------------T-GCAAA-TA--------CGGCT-CTG-----
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16178 17 +     17162 C----------------------------T-GCAAA-TA--------CAGCT-CAG-----
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451133 17 + 189096842 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17426 17 -     18408 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503087 17 +  60362399 c----------------------------t-gcaaa-tg--------tggct-aat-----
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6723 17 -     23171 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220066 17 +   9314153 C----------------------------T-GCAAA-TG--------TGGCT-aat-----
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613201 17 +  59632846 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104782 17 -  63665305 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268046 17 +    496798 C----------------------------T-GAAAA-TA--------AGGCT-AAC-----
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2726 17 +      5315 c----------------------------t-gcaaa-ta--------tggct-aaa-----
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20078 16 -     39886 t----------------------------t-gcaaa-ta--------t-gct-aat-----
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993640 17 +  23392119 C----------------------------T-ATAAA-TA--------AAGGT-AAG-----
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997082 17 +  23407841 c----------------------------t-ataaa-ta--------aaggt-aag-----
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60183 17 -     66877 C----------------------------T-ATAAA-TA--------AAGGT-AAG-----
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2712 17 -     12580 C----------------------------T-GCGAA-TA--------TGGCT-CAG-----
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40598 17 +     53515 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368801 17 -  26074798 C----------------------------C-GCAAA-TA--------AGGCT-CAG-----
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5690 17 -     34880 C----------------------------C-GCAAA-TA--------AGGCT-CAG-----
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64785 17 -     89041 C----------------------------C-GCAAA-TA--------AGGCT-CAG-----
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1218 17 -      1636 C----------------------------T-GAAAA-TA--------AGGCT-AAC-----
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489830 17 -  27778364 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16663 17 +     27315 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138351 17 -   4669795 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42091 17 +     47900 C----------------------------T-GCAAA-TA--------TGGCT-GAG-----
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41924 17 -     44860 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41907 17 -    148725 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25005 17 -     40656 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4974 17 +     20796 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9164 17 -     17524 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24886 17 -     34525 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9595 17 -     25376 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362194 17 -  39242232 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267902 17 +  21565898 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29363 17 -     45857 C----------------------------T-GCAAA-TA--------TGGCT-GAG-----
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25183 17 -     32606 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1336 17 +      8499 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22855 17 +     70610 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19780 17 +     36323 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10478 17 -     19938 c----------------------------t-gcaaa-ta--------tggtt-cac-----
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28305 17 -     33796 C----------------------------T-GCCAA-TA--------TGGCT-AAT-----
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2835 17 -     15404 c----------------------------t-gccaa-ta--------tggct-aat-----
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6697 17 -     32913 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17110 17 -     40346 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17374 17 +    216457 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17158 17 +     39636 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1544 17 +      5346 C----------------------------T-GCAAA-TA--------CAGCT-CAG-----
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40229 17 -    112038 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5801 17 +     34062 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340677 17 +  18827391 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7222 17 -     44032 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302002 17 - 135778131 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406456 17 -   2368649 C----------------------------T-GCACA-CA--------CGGCG-AAG-----
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376333 17 - 200372422 c----------------------------t-gcaca-ta--------cggcg-aag-----
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              6345 17 -      6605 C----------------------------T-GCACA-TA--------CGGCG-AAG-----
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804967 17 +  53390261 t----------------------------c-ataaa-ta--------cagca-aat-----
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           410 17 -      8242 c----------------------------t-gcaaa-ta--------taact-gtt-----
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 39989 17 -     83289 T----------------------------T-GAAAG-TA--------GGGCT-AAT-----
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1587 17 +     87169 c----------------------------t-gcaaa-ta--------tggct-gat-----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642532 17 -   1526836 C----------------------------T-GCTAA-TA--------CAGGT-AAT-----
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2610 17 +     50838 C----------------------------T-ACAAA-TG--------AAGAT-AAT-----
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1262 17 +     36344 C----------------------------T-ACAAA-CA--------AAGAT-AAG-----
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2107816 17 -   2246927 c----------------------------t-gcacg-ca--------tggtc-cac-----
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290254 17 +  12879189 c----------------------------t-gcaaa-ta--------cggct-aac-----
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862391 17 -  20541912 g----------------------------t-gcaaa-ta--------cggct-aaa-----
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662122 17 -   1390856 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136907 17 -    198055 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    95994 17 -    115145 C----------------------------T-ATAGA-TA--------TAGAC-AAG-----
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948251  3 -  37912305 C----------------------------T-G-----------------------------
i Dipodomys_ordii.KN672350.1                             I 59 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3198  3 -     10735 c----------------------------t-g-----------------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 59 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7589 17 +     14636 C----------------------------T-ATATA-CA--------AAGGT-AAG-----
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851334 17 - 111700974 t----------------------------a-gcaaa-tg--------tggct-cat-----
i Echinops_telfairi.JH980293.1                           C 0 I 4
s Eidolon_helvum.AWHC01266696.1                               3959 17 +     19438 c----------------------------t-tcaaa-ta--------tggct-aat-----
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28218 18 +    110024 T----------------------------T-GCAAGTTA--------GGGCC-AAG-----
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10182 18 +     18970 T----------------------------T-GCAAGTTA--------GGGCT-AAG-----
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913619 17 +  41312741 c----------------------------t-acaaa-ta--------tggct-aac-----
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12575996 44 +  14770903 ctctgttactatagtgagacactac-ttct-gcaaa-ga--------tggct-aat-----
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039103 17 -   4378816 c----------------------------t-gcaaa-tc--------tggct-aac-----
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373037 17 +  39960074 c----------------------------t-gcaaa-tc--------tggct-aac-----
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409823 17 -    498745 c----------------------------t-gcaaa-tc--------tggct-aac-----
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260200 17 +  21539334 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186243961 17 - 206538554 C----------------------------T-GCAAA-TA--------GGGCT-AAT-----
i Felis_catus.CM001381.2                                 C 0 I 241
s Felis_catus_fca126.CM031415.1                          185113743 17 - 205367284 C----------------------------T-GCAAA-TA--------GGGCT-AAT-----
i Felis_catus_fca126.CM031415.1                          C 0 I 245
s Felis_nigripes.FelNig_flattened_line_31944                 25091 17 -     30238 c----------------------------t-gcaaa-ta--------gggct-aat-----
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     121373 16 -    137831 C----------------------------T--CAAA-TA--------TGGCT-AAT-----
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4914 16 +     22493 C----------------------------T--CAAA-TA--------TGGCT-AAT-----
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16969 17 -     32986 C----------------------------T-GCAAA-TA--------ATCCT-AAT-----
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16720 17 +     18121 c----------------------------t-gtaaa-ta--------tggct-aat-----
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               2371 22 -      8343 c----------------------------t-gcaaa-ta--------tggct-aagtcttc
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251861 22 - 186649187 C----------------------------T-GCAGA-TA--------CGGCT-Aagtcttc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28092 17 -    327341 C----------------------------T-GCAAA-TA--------TGGCG-GAC-----
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1924690 17 -  22651954 c----------------------------t-ataaa-ta--------tagct-aag-----
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547860 17 -   1711038 c----------------------------t-gcaaa-ta--------tggct-gat-----
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47176 17 +     49977 c----------------------------t-gcaaa-ta--------tggtt-gat-----
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140128 17 -    630532 C----------------------------T-GCAGA-TA--------CAGCT-AAG-----
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66573 17 +     83186 C----------------------------T-GCAAA-TA--------TGGCT-GAT-----
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68932 17 +    143317 C----------------------------T-ATAAA-TA--------AAGGT-AAG-----
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3163 17 +     12352 c----------------------------t-gaaga-ta--------cggct-aag-----
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10346 17 +     55766 c----------------------------t-gaaga-ta--------cggct-aag-----
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2049465 17 + 191637585 t----------------------------t-gcaga-ta--------cagct-aag-----
i Hylobates_pileatus_b.LG02                                     C 0 I 477
s Hylobates_pileatus_a.tarseq_633                            7798820 17 +  11177569 C----------------------------T-GAAGA-TA--------CGGCT-AAG-----
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384459 17 +   7955117 A----------------------------T-TCAAA-TG--------TGGCT-AAT-----
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                    1369 25 -      1527 C----------------------------T-GCAAA-TAGTTGCTTCTGGCT-AAT-----
i Indri_indri.k141_4600452                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1236878  7 +   9596543 -------------------------------------------------GAAAATT-----
i Jaculus_jaculus.JH725527.1                             I 2 C 0
s Lagothrix_lagothricha.k141_246028                          40949 17 +    110728 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59473 44 -     65777 ctctgtttctatagtgagacact-ccttct-gcaaa-ga--------tggct-aat-----
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1629 17 -     13097 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1580 17 +      5940 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1211 17 -      5717 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7844 17 -     11567 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9225 17 -     12945 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6661 17 +     29618 C----------------------------T-GCGAA-TA--------TGGCT-AAT-----
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6658 17 +     31569 C----------------------------T-GCGAA-TA--------TGGCT-AAT-----
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6668 17 +     24756 c----------------------------t-gcgaa-ta--------tggct-aat-----
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6662 17 +     16388 C----------------------------T-GCGAA-TA--------TGGCT-AAT-----
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810969 17 -   3914936 c----------------------------t-gcaaa-ta--------tggcc-aat-----
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               330304 17 -   1826925 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7367 17 +     19643 T----------------------------T-GCAAA-TA--------TGGCT-AAG-----
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041027 17 -   6120653 T----------------------------T-GCAAA-TA--------TGGCT-AAG-----
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612356 17 +  59628241 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42621 17 -     61512 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370282 17 -  60120075 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22537 17 +     30207 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19640 17 -     24934 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22489 17 +     30527 C----------------------------T-GCAAA-TA--------CTGCT-GAG-----
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33679 17 -     50087 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43450 17 +     51645 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412618 17 - 187317192 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396841 17 +  25927173 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46005 17 -     62418 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22660 17 +     24253 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42481 17 +     59329 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268414 17 +    668171 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19595 17 +     21031 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  192 17 +     17132 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Macaca_tonkeana.k141_339739                            T 17 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220925 17 -    270270 c----------------------------t-tcaaa-ta--------aggct-aat-----
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319692 17 +  24302211 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354524 17 -    752769 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671204 17 -    737560 c----------------------------t-gcaaa-ta--------cagct-agt-----
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218495 17 +    317179 c----------------------------t-gcaaa-ta--------cagct-agt-----
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498658 17 +  40650429 a----------------------------t-tcaaa-tg--------tggct-tat-----
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148114 16 +    207569 c----------------------------t-gcaaa-ta--------cggct-gt------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23492 17 -     74585 c----------------------------t-acaaa-ta--------tgact-aac-----
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mico_argentatus.k141_582562                                 7589 17 +     17804 C----------------------------T-GCAAA-TA--------CGGCT-CGG-----
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8373 17 -     12984 C----------------------------T-GCAAA-TA--------CGGCT-CGG-----
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16324 17 -     26561 C----------------------------G-GCAAA-TA--------CGGCT-CGG-----
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982273 17 +  93316391 C----------------------------T-ACAAA-TA--------TGGCT-AAT-----
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41650 17 +    145209 T----------------------------T-GCAAA-TG--------TGGTT-CAT-----
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 4
s Micronycteris_hirsuta.MicHir_scaffold_2233                182340 17 +    200668 c----------------------------t-tcaaa-ta--------cggct-gaa-----
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19719 17 -     27822 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5979 17 +     27589 c----------------------------a-gcaaa-ta--------tggcc-aat-----
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50069 16 -     62432 c----------------------------t--caaa-ta--------tggct-aat-----
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176519 17 +    366855 c----------------------------t-gcaga-ca--------tggct-aaa-----
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15846 17 -     63510 C----------------------------T-GCAAA-TA--------TGGCG-GAC-----
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36344 44 +     47283 ctctgttactatagtgagacactac-ttct-gcaaa-ta--------cggct-aat-----
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14352432 17 +  14710649 c----------------------------t-acaaa-ta--------tggct-aac-----
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790360 44 +  10118263 ctctgttactatagtgagacactac-ttct-gcaaa-ta--------tggct-aat-----
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4384759 44 +   6019432 ctctgtttctatagtgagacactac-ttct-gcaaa-ta--------tgact-aat-----
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380581 44 +   4330536 ctctgttactatagtgagacactac-ttct-gcaaa-ta--------tggct-aat-----
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117247 17 +    130748 c----------------------------t-gcaaa-ta--------tgatt-cat-----
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26300 17 +     34575 C----------------------------T-GCAAA-TA--------CGGCC-AAG-----
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466366 17 -  31847680 c----------------------------t-gcaaa-ta--------tggcc-aat-----
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125156 17 -    149072 c----------------------------t-gcaaa-ta--------cggct-act-----
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51052 17 -    132029 C----------------------------T-GAAGA-TA--------TGGCT-AAG-----
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7147 17 -     16345 C----------------------------T-GAAGA-TA--------TGGCT-AAG-----
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13032 17 +     22201 C----------------------------T-GAAGA-TA--------TGGCT-AAG-----
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411316 17 -  22158432 C----------------------------T-GAAGA-TA--------TGGCT-AAG-----
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23430 17 -     54323 C----------------------------T-GAAGA-TA--------TGGCT-AAG-----
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195958 17 +   9404916 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93632658 17 + 196305487 T----------------------------T-GCAAA-TA--------TGGCT-AAG-----
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             2047 17 +      2758 T----------------------------T-GCAAA-TA--------TGGCT-AAG-----
i Nycticebus_coucang.k141_8166032                        C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560912 17 - 199412804 T----------------------------T-GCAAA-TA--------TGGCT-AAG-----
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11044964 17 -  11899542 t----------------------------t-acaaa-tg--------aaaat-aat-----
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449154 17 +   2017862 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    89939 18 -    140218 T----------------------------T-GCAAATTA--------GGGCT-AAT-----
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104772 17 +    107918 T----------------------------G-ACAAG-TA--------TGGAT-ACT-----
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11039 17 -     14239 c----------------------------t-gtaag-ta--------gggct-cat-----
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 4
s Otocyon_megalotis.JAEUCK010005147.1                        36997 17 +    559221 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        36498 17 -     51505 C----------------------------T-GCAAA-TA--------TGGCT-AAT-----
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             349512 17 +   1103335 C----------------------------T-GCAAA-TA--------TGGCT-AAA-----
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.NBAG03003182.1                              8781 23 -     24457 c----------------------------tgGCAAA-TA--------TGGCT-AAATCTTC
i Pan_troglodytes.NBAG03003182.1                         T 23 I 664
s Panthera_onca.PanOnc_flattened_line_3271                   21912 17 -    230217 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459238 17 -  18783137 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3969958 17 +   8748460 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240532 17 - 183742232 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             6996 17 +     21308 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288035 17 -  20919399 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19651 17 -     27687 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12787 17 +     16796 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19597 17 -     23640 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12572 17 +     78924 c----------------------------t-gcaaa-ta--------tagct-aat-----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22752 17 +     31479 C----------------------------T-GCAAA-TA--------TGCCT-AAG-----
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            15122 17 -     24908 C----------------------------T-GCAAA-TA--------TGCCT-AAG-----
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37452  3 +     38305 T----------------------------T-G-----------------------------
i Perognathus_longimembris.PerPac_flattened_line_28053   I 60 C 0
s Peromyscus_maniculatus.KI615324.1                         244417 17 +  18517816 T----------------------------G-ACAAG-TA--------GGGCT-ACT-----
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29644 17 -     56120 C----------------------------T-CTAAC-TA--------TAGCT-AAA-----
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6451 17 +      7560 C----------------------------T-GCAAA-TA--------CGGCC-AAG-----
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62159 17 -     63152 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44758 17 +     45295 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2436 17 +      5735 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              519 45 +     22231 ctctgtcactataatgagacactaccttct-gcaaa-ga--------tggct-aat-----
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62579 17 +    207309 C----------------------------T-GCAAA-TA--------CGGCT-CCG-----
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3675 17 -     25401 C----------------------------T-GCAAA-TA--------CGGCT-CCG-----
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29414 17 +     58159 C----------------------------T-GCAAA-TA--------CGGCT-CCG-----
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29690 17 +     63561 C----------------------------T-GCAAA-TA--------CGGCT-CCG-----
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29453 17 +     51148 C----------------------------T-GCAAA-TA--------CGGCT-CCG-----
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554422 17 -   4542175 C----------------------------T-GCAAA-TA--------CGGCT-CCG-----
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29437 17 +     51125 C----------------------------T-GCAAA-TA--------CGGCT-CCG-----
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5868 17 +     39866 C----------------------------T-GCAGA-TA--------TGGCT-CAG-----
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           953 17 -      9282 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40357 17 -     87950 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40750 17 -     88961 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5449 17 -     39403 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40403 17 +     87928 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5446 17 -     60166 C----------------------------T-GCAAA-TA--------TGGCT-CAG-----
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12382 17 -     67232 C----------------------------T-GCAGA-TA--------TGGCT-CAG-----
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40298 17 -     90634 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41766 17 +     89403 C----------------------------T-GCAAA-TA--------TGGCT-CAG-----
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   174877 22 - 189387572 C----------------------------T-GCAGA-TA--------TGGCT-AAgtcttc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189875 22 -   9816681 C----------------------------T-GCAGA-TA--------CGGCT-AAGTCTTC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24933 17 +     69807 C----------------------------T-GCAAA-TA--------CGGCC-AAG-----
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42128 17 -     80239 c----------------------------t-gcaaa-ta--------cggcc-aag-----
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563750 17 -   2598838 C----------------------------T-GCAAA-TA--------TGGCT-AAT-----
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1386 17 -      7103 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             1983 17 -     11706 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5719 17 -     30655 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32044 17 +     46564 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92315 17 -     98465 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5952 17 +     35169 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49585 17 -     66298 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2210 17 -     18639 c----------------------------t-acaaa-ta--------tggct-aac-----
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838553 17 -  28871421 c----------------------------t-tcaaa-ta--------tggct-agt-----
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535119 17 -   4952924 c----------------------------t-tcaaa-ta--------tggct-agt-----
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096558 17 +  38429054 c----------------------------t-gcaaa-ta--------gggct-aat-----
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24324 17 +     91421 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150817 17 -   7812017 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5194 17 +     72585 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911208 17 +   3329780 c----------------------------t-gcaaa-ta--------tggtt-ggt-----
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26153 17 +     27361 c----------------------------t-gcaaa-tg--------cggct-aag-----
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119501 17 + 195417433 C----------------------------T-GCAAA-TG--------CGGCT-AAG-----
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233761 17 -   7961872 c----------------------------t-gcaaa-tg--------cggct-aag-----
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72536 17 -    116970 c----------------------------t-tcaaa-ta--------tggct-aat-----
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1542 17 +     27962 C----------------------------T-GCAAA-TA--------CAGCT-CAG-----
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1550 17 +      6077 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1569 17 +      5971 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1623 17 +      5932 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1768 17 -      2099 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388890 17 - 209938924 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1571 17 +      5979 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1937 17 -      4301 C----------------------------T-GCAAA-TA--------CGGCT-CAG-----
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236025 17 +   5703754 C----------------------------C-GCAAA-TA--------CGGCT-CAG-----
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5615 17 +     21866 C----------------------------C-GCAAA-TA--------CGGCT-CAG-----
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113745 17 +    313613 t----------------------------c-ataat-tg--------tggca-aat-----
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22641 17 +     27374 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26160 17 +     58920 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12656 17 -     45317 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20314 17 -     42441 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     22994 17 -     29113 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26063 17 -     48123 C----------------------------T-GCAAA-TA--------CGCCT-AAG-----
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    45983 17 +     77746 T----------------------------T-GCAAG-GA--------GGGCT-TAT-----
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856061 17 -   1910179 c----------------------------c-gctaa-ta--------agact-aat-----
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866028 17 +   3870691 A----------------------------T-TCAAA-TG--------TGGCT-AAT-----
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4207 17 -     97271 c----------------------------t-acaga-ta--------tggct-aac-----
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122257 17 +    196729 C----------------------------T-GCAAA-TA--------TGGTG-GAT-----
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388288 17 +   1523678 C----------------------------T-GAAGA-TA--------CGGCT-AAG-----
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11360 17 +     22964 c----------------------------t-tcaaa-ta--------tggct-aat-----
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 365 17 +      5583 c----------------------------t-gcaaa-ta--------tgatt-cat-----
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189083 17 +    199430 c----------------------------t-gcaaa-tt--------tggct-aat-----
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103039 17 -    539355 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4738 17 +      6850 C----------------------------T-GAAAA-TA--------AGGCT-AAC-----
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4777 17 +     20590 C----------------------------T-GAAAA-TA--------AGGCT-AAC-----
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350518 17 - 186847797 C----------------------------T-GCAAA-TA--------CGGCT-GAG-----
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              21974 17 -     33621 C----------------------------T-CTAAA-TA--------TAGCT-AAA-----
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17486 17 -     31044 c----------------------------t-gcaaa-ta--------tggtt-cac-----
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477403 17 -    610378 c----------------------------t-gcaaa-ta--------cagct-gaa-----
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18205 17 +     26378 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30889 17 -     78344 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17526 17 +     25722 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25751 17 -     62838 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25868 17 +     46913 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6676 17 -     28527 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27690 17 -     64340 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25727 17 -     63452 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7170 17 +     22490 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          598 17 -      6147 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7592 17 -     13050 c----------------------------t-gcaaa-ta--------cggct-aag-----
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252831 17 -   6242583 c----------------------------t-gcaaa-ta--------cggct-aag-----
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58562 17 +     59866 C----------------------------T-GCAAA-TA--------CGGCT-AAG-----
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831326 17 -   4065304 t----------------------------t-gcaaa-ta--------tctct-act-----
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5842 17 -     70247 t----------------------------t-gcaaa-ta--------tctgt-aat-----
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104971 17 -    105689 c----------------------------c-acaaa-ta--------cagca-aat-----
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179327 17 +   5085361 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22814 17 -     30710 T----------------------------T-GCATA-TA--------TGGCT-AAT-----
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21721 17 -    147434 t----------------------------t-gcaaa-ta--------tggct-aat-----
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102721 17 -    112863 c----------------------------t-gcaaa-tg--------tggct-aat-----
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171786 17 -    224448 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26374 17 -     86975 c----------------------------t-gcaaa-ta--------tggct-aat-----
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1042  6 +      2695 -------------------------------------------------GAA-ACT-----
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 2 C 0
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2385 5 +     36723 tcctt
s Gorilla_beringei.k141_3358147                               2393 5 -      8343 tcctt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                251883 5 - 186649187 tcctt
i Gorilla_gorilla.LT578341.1                             C 0 I 106
s Pan_troglodytes.CM009242.2                               1469770 2 - 189151597 tc---
i Pan_troglodytes.CM009242.2                             I 22 T 447
s Pongo_abelii.CM009266.2                                   174899 5 - 189387572 tcctt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189897 5 -   9816681 TCCTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991 0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     29661 0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_28053       37455 0 +     38305 C
e Octodon_degus.JH651603.1                                11044981 0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949 0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1924707 0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606 0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254 0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    96011 0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   1279 0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627 0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       60200 0 -     66877 C
e Cavia_porcellus.DS562891.1                               4997099 0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4993657 0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    41667 4 +    145209 I
e Echinops_telfairi.JH980293.1                            62851351 4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              11056 4 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408 0 -  20541912 C
e Pygathrix_nigripes_a.k141_215492                              5211 0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  150834 0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             24341 0 +     91421 C
e Callibella_humilis.k141_1233062                             7834 0 +     18648 C
e Perodicticus_potto.k141_1854441                            15139 0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          22769 0 +     31479 C
e Otolemur_garnettii.GL873799.1                             349529 0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        36515 0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929 0 - 199412804 C
e Nycticebus_coucang.k141_8166032                             2064 1 +      2758 I
e Nycticebus_bengalensis.LG01                             93632675 0 + 196305487 C
e Loris_tardigradus.ctg83                                  5041044 0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            7384 0 +     19643 C
e Galagoides_demidoff.k141_561628                            16986 0 -     32986 C
e Galago_senegalensis.k141_991736                             4930 0 +     22493 C
e Galago_moholi.ctg3793                                     121389 0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       17350 0 -     45910 C
e Allochrocebus_solatus.k141_3554717                         15445 0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         13769 0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503 0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2107833 0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495 0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743 0 +      5315 C
e Tupaia_tana.TupTan_flattened_line_394                       5859 0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1831343 0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         26391 0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102738 0 -    112863 C
e Ursus_maritimus.KK499267.1                                179344 0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227 0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        37014 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1449171 0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11466383 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14352449 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23509 0 -     74585 C
e Lycaon_pictus.CM007581.1                                41612373 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810986 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913636 0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104799 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41613218 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          220083 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740 0 -     23171 C
e CanFam4.chr16                                           42503104 0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672 0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834 0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048 0 +      2695 C
e Xerus_inauris.XerIna_scaffold_2302                        171803 0 -    224448 C
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Varecia_variegata.k141_289850                              21738 0 -    147434 C
e Varecia_rubra.k141_787544                                  22831 0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988 0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579 0 +     59866 C
e Trachypithecus_phayrei.ctg124                             252848 0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                         7609 0 -     13050 C
e Trachypithecus_melamera.k141_591572                          615 0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     7187 0 +     22490 C
e Trachypithecus_laotum.k141_928651                          25744 0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      27707 0 -     64340 C
e Trachypithecus_germaini.k141_57262                          6693 0 -     28527 C
e Trachypithecus_geei.k141_1001272                           25885 0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      25768 0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       17543 0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     30906 0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        18222 0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    477420 0 -    610378 C
e Theropithecus_gelada.CM009954.1                           350535 0 - 186847797 C
e Tarsius_wallacei.k141_226975                                4794 0 +     20590 C
e Tarsius_lariang.k141_1780720                                4755 0 +      6850 C
e Tapirus_terrestris.TapTer_scaffold_755                    103056 0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      189100 0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382 0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377 0 +     22964 C
e Symphalangus_syndactylus.tarseq_199                       388305 0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274 0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1866045 0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078 0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000 0 +     77746 C
e Semnopithecus_vetulus.k141_244474                          26080 0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     23011 0 -     29113 C
e Semnopithecus_priam.k141_714795                            20331 0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12673 0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      26177 0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22658 0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762 0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           5632 0 +     21866 C
e Sapajus_apella.ctg103                                     236042 0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954 0 -      4301 C
e Saguinus_mystax.k141_8077960                                1588 0 +      5979 C
e Saguinus_midas.LG03                                       388907 0 - 209938924 C
e Saguinus_labiatus.k141_1571581                              1785 0 -      2099 C
e Saguinus_inustus.k141_2469308                               1640 0 +      5932 C
e Saguinus_imperator.k141_1898058                             1586 0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             1567 0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1559 0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553 0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             233778 0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104119518 0 + 195417433 C
e Rhinopithecus_bieti.k119_221883                            26170 0 +     27361 C
e Rhinolophus_sinicus.LVEH01000134.1                       2911225 0 +   3329780 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575 0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3535136 0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5838570 0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            49602 0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969 0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       92332 0 -     98465 C
e Propithecus_perrieri.k141_1496898                          32061 0 +     46564 C
e Propithecus_edwardsi.k141_635656                            5736 0 -     30655 C
e Propithecus_diadema.k141_153680                             2000 0 -     11706 C
e Propithecus_coronatus.k141_209299                           1403 0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1563767 0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145 0 -     80239 C
e Presbytis_comata.k141_1230337                              24950 0 +     69807 C
e Plecturocebus_moloch.k141_1031110                          41783 0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          40315 0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      12399 0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          5463 0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          40420 0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          5466 0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     40767 0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       40374 0 -     87950 C
e Plecturocebus_brunneus.k141_862875                           970 0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        5885 0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454 0 +     51125 C
e Pithecia_pithecia.tarseq_165                              554439 0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           29470 0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         29707 0 +     63561 C
e Pithecia_hirsuta.k141_640380                               29431 0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          3692 0 -     25401 C
e Pithecia_albicans.k141_1239476                             62596 0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564 0 +     22231 C
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453 0 +      5735 C
e Piliocolobus_kirkii.k141_579682                            44775 0 +     45295 C
e Piliocolobus_gordonorum.k141_905727                        62176 0 -     63152 C
e Piliocolobus_badius.k141_2495623                            6468 0 +      7560 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434 0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589 0 +     78924 C
e Papio_ursinus.k141_2278143                                 19614 0 -     23640 C
e Papio_papio.k141_799093                                    12804 0 +     16796 C
e Papio_kindae.k141_2214839                                  19668 0 -     27687 C
e Papio_hamadryas.Contig39                                  288052 0 -  20919399 C
e Papio_cynocephalus.k141_1507553                             7013 0 +     21308 C
e Papio_anubis.CM001495.2                                   240549 0 - 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18459255 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21929 0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789 0 +    107918 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957 0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447 0 -     54323 C
e Nomascus_siki_b.tarseq_93                            8411333 0 -  22158432 C
e Nomascus_gabriellae.k141_57920                             13049 0 +     22201 C
e Nomascus_concolor.k141_735679                               7164 0 -     16345 C
e Nomascus_annamensis.k141_1771965                           51069 0 -    132029 C
e Noctilio_leporinus.NocLep_scaffold_7894                   125173 0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317 0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264 0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625 0 +   4330536 C
e Myotis_davidii.KB100139.1                                4384803 0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9790404 0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388 0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   15863 0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536 0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mirza_zaza.k141_766280                                     50085 0 -     62432 C
e Miopithecus_ogouensis.k141_1534655                         19736 0 -     27822 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357 0 +    200668 C
e Microcebus_murinus.CM007674.1                           74982290 0 +  93316391 C
e Mico_schneideri.k141_1877700                                     16341 0 -     26561 C
e Mico_humeralifer.k141_1180625                               8390 0 -     12984 C
e Mico_argentatus.k141_582562                                 7606 0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130 0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7498675 0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             218512 0 +    317179 C
e Manis_javanica.JSZB01003497.1                             671221 0 -    737560 C
e Mandrillus_sphinx.Contig270                               354541 0 -    752769 C
e Mandrillus_leucophaeus.scaffold280                        319709 0 +  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942 0 -    270270 C
e Macaca_tonkeana.k141_339739                                  209 0 +     17132 C
e Macaca_thibetana.k99_41370                                 19612 0 +     21031 C
e Macaca_silenus.Contig273                                  268431 0 +    668171 C
e Macaca_siberu.k141_2185972                                 42498 0 +     59329 C
e Macaca_radiata.k141_3557992                                22677 0 +     24253 C
e Macaca_nigra.k141_2818840                                  46022 0 -     62418 C
e Macaca_nemestrina.KQ007038.1                              396858 0 +  25927173 C
e Macaca_mulatta.NC_041758.1                                412635 0 - 187317192 C
e Macaca_maura.k141_1103459                                  43467 0 +     51645 C
e Macaca_leonina.k141_321385                                 33696 0 -     50087 C
e Macaca_fuscata.k119_546792                                 22506 0 +     30527 C
e Macaca_fascicularis.k141_1397292                           19657 0 -     24934 C
e Macaca_cyclopis.k119_263443                                22554 0 +     30207 C
e Macaca_assamensis.Contig5                                 370299 0 -  60120075 C
e Macaca_arctoides.k141_1757516                              42638 0 -     61512 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321 0 -   1826925 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679 0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          6685 0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              6675 0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          6678 0 +     29618 C
e Leontopithecus_rosalia.k141_349454                          9242 0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     7861 0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        1228 0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           1597 0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        1646 0 -     13097 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517 0 -     65777 C
e Lagothrix_lagothricha.k141_246028                          40966 0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885 0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Indri_indri.k141_4600452                                    1394 0 -      1527 C
e Ictidomys_tridecemlineatus.JH393364.1                     384476 0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837 0 +  11177569 C
e Hylobates_pileatus_b.LG02                                       2049482 477 + 191637585 I
e Hylobates_klossii.k141_738755                              10363 0 +     55766 C
e Hylobates_agilis.k141_1155965                               3180 0 +     12352 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590 0 +     83186 C
e Hoolock_leuconedys.ctg274                                    140145 0 -    630532 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47193 0 +     49977 C
e Hipposideros_armiger.JXIK01000431.1                      1547877 0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109 0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737 0 +     18121 C
e Felis_nigripes.FelNig_flattened_line_31944                 25108 0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113760 245 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Erythrocebus_patas.Contig38                               260217 0 +  21539334 C
e Equus_przewalskii.KK951119.1                              409840 0 -    498745 C
e Equus_caballus.CM000403.2                               21373054 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3039120 0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12576040 0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           10200 0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          28236 0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976 0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924 0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139 0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271 0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549 0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604 0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006 0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427 0 -      8242 C
e Condylura_cristata.JH655891.1                           35804984 0 +  53390261 C
e Colobus_polykomos.k141_1559707                              6362 0 -      6605 C
e Colobus_guereza.LG01                                      376350 0 - 200372422 C
e Colobus_angolensis.KN981557.1                             406473 0 -   2368649 C
e Chlorocebus_sabaeus.CM001947.1                            302019 0 - 135778131 C
e Chlorocebus_pygerythrus.k141_3063162                        7239 0 -     44032 C
e Chlorocebus_aethiops.ctg25                                340694 0 +  18827391 C
e Chiropotes_sagulatus.k141_1113111                           5818 0 +     34062 C
e Chiropotes_israelita.k141_313004                           40246 0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           1561 0 +      5346 C
e Cheracebus_torquatus.k141_890198                           17175 0 +     39636 C
e Cheracebus_regulus.k141_471822                             17391 0 +    216457 C
e Cheracebus_lugens.k141_1179667                             17127 0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             6714 0 -     32913 C
e Cheirogaleus_medius.k141_759766                             2852 0 -     15404 C
e Cheirogaleus_major.k141_666340                             28322 0 -     33796 C
e Cercopithecus_roloway.k141_3012935                         19797 0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           22872 0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         1353 0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       25200 0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        29380 0 -     45857 C
e Cercopithecus_mona.ctg39                                  267919 0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  362211 0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                            9612 0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          24903 0 -     34525 C
e Cercopithecus_diana.k141_132293                             9181 0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           4991 0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        25022 0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          41924 0 -    148725 C
e Cercocebus_lunulatus.k141_2779015                          41941 0 -     44860 C
e Cercocebus_chrysogaster.k141_1522556                       42108 0 +     47900 C
e Cercocebus_atys.KQ010504.1                                138368 0 -   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680 0 +     27315 C
e Cephalopachus_bancanus.k141_72622                           1235 0 -      1636 C
e Cebus_unicolor.k141_1654760                                64802 0 -     89041 C
e Cebus_olivaceus.k141_1404781                                5707 0 -     34880 C
e Cebus_albifrons.Contig27                                  368818 0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               40615 0 +     53515 C
e Cebuella_niveiventris.k141_592277                           2729 0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094 0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           268063 0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443 0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165451150 0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           16195 0 +     17162 C
e Callimico_goeldii.k141_1609886                              7497 0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         18339 0 +    119600 C
e Cacajao_hosomi.k141_81245                                  18426 0 +     95584 C
e Cacajao_calvus.k141_89051                                  40900 0 -     91139 C
e Cacajao_ayresi.k141_96119                                   5606 0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889 0 -     19611 C
e Avahi_laniger.k141_2756659                                  3888 0 +     11645 C
e Ateles_paniscus.k141_866194                                20710 0 -     33135 C
e Ateles_marginatus.k141_970259                              46651 0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              31280 0 +     44353 C
e Ateles_chamek.k141_615173                                   3727 0 -     28759 C
e Ateles_belzebuth.k141_1572163                               8590 0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               272423 0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732 0 -     32367 C
e Aotus_vociferans.k141_944972                                6977 0 +      8415 C
e Aotus_trivirgatus.k141_192090                              21841 0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                670199 0 +   5030052 C
e Aotus_griseimembra.k141_982342                             42186 0 +     43593 C
e Aotus_azarae.k141_118258                                   48439 0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387 0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624 0 +     42133 C
e Alouatta_puruensis.k141_251022                              6485 0 +     30854 C
e Alouatta_palliata.k141_638677                              44360 0 +     70886 C
e Alouatta_nigerrima.k141_376068                             38662 0 +     45454 C
e Alouatta_macconnelli.k141_361275                           21679 0 -     24835 C
e Alouatta_juara.k141_1687208                                40033 0 -     64179 C
e Alouatta_discolor.k141_2561099                             41595 0 +     55831 C
e Alouatta_caraya.k141_1109140                               42145 0 -     78289 C
e Alouatta_belzebul.k141_1011583                             69916 0 -     84148 C
e Allochrocebus_lhoesti.k141_441277                          41129 0 +     44087 C
e Allenopithecus_nigroviridis.k141_3755588                   45208 0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    15727 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       2390 92 +     36723 caccac-cgtagaattagatggcttct-gcagatacagctaagtct---ct----ttcac---caccatagaattaggtggcttctgcagatatggcta------------------agtct
s Gorilla_beringei.k141_3358147                               2398 95 -      8343 catctt-catagaattaggtggcttct-gcagatacggctaagtct---tc-tcctccac---caccatagaattggatggattctgcaaatatggcta------------------agtct
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 67989 94 +  33314783 caccac-catagAATTAGGTGGCTTCT-GCAGATA-Ggctaagtct---tc-tccttcac---caccatagaattagatggattctgcaaatatggcta------------------agtct
i Gorilla_gorilla.LT578336.1                             T 203 C 0
s Pan_troglodytes.CM009242.2                               1469325 95 - 189151597 caccac-catagaattaggtggcttct-gcagatacagctaagtct---tc-tctttcac---caccatagaattaggtggcttctgcagatacggcta------------------agtct
i Pan_troglodytes.CM009242.2                             T 447 I 450
s Pongo_abelii.CM009266.2                                   174904 95 - 189387572 cacctt-catAGGATTAGGTGGCTTGT-GCAGATATGGCTAAGTCT---TCTCC-TTCACTTTCA---Taggattaggtggcttgtgcagatatggcta------------------aGTCT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189902 46 -   9816681 CACCAC-CATAGAATTAGGTGGCTTCT-ACAGATACGGCTAAGTCT---TC-----------------------------------------------------------------------
i Pongo_pygmaeus.ctg66                                   C 0 I 1
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991  0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     29661  0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_28053       37455  0 +     38305 C
e Octodon_degus.JH651603.1                                11044981  0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949  0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1924707  0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606  0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254  0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    96011  0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   1279  0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627  0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       60200  0 -     66877 C
e Cavia_porcellus.DS562891.1                               4997099  0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4993657  0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    41667  4 +    145209 I
e Echinops_telfairi.JH980293.1                            62851351  4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              11056  4 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408  0 -  20541912 C
e Pygathrix_nigripes_a.k141_215492                              5211  0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  150834  0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             24341  0 +     91421 C
e Callibella_humilis.k141_1233062                             7834  0 +     18648 C
e Perodicticus_potto.k141_1854441                            15139  0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          22769  0 +     31479 C
e Otolemur_garnettii.GL873799.1                             349529  0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        36515  0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929  0 - 199412804 C
e Nycticebus_coucang.k141_8166032                             2064  1 +      2758 I
e Nycticebus_bengalensis.LG01                             93632675  0 + 196305487 C
e Loris_tardigradus.ctg83                                  5041044  0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            7384  0 +     19643 C
e Galagoides_demidoff.k141_561628                            16986  0 -     32986 C
e Galago_senegalensis.k141_991736                             4930  0 +     22493 C
e Galago_moholi.ctg3793                                     121389  0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       17350  0 -     45910 C
e Allochrocebus_solatus.k141_3554717                         15445  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         13769  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503  0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2107833  0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495  0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743  0 +      5315 C
e Tupaia_tana.TupTan_flattened_line_394                       5859  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1831343  0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         26391  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102738  0 -    112863 C
e Ursus_maritimus.KK499267.1                                179344  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227  0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        37014  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1449171  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11466383  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14352449  0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23509  0 -     74585 C
e Lycaon_pictus.CM007581.1                                41612373  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810986  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913636  0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104799  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41613218  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          220083  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740  0 -     23171 C
e CanFam4.chr16                                           42503104  0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672  0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834  0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048  0 +      2695 C
e Xerus_inauris.XerIna_scaffold_2302                        171803  0 -    224448 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Varecia_variegata.k141_289850                              21738  0 -    147434 C
e Varecia_rubra.k141_787544                                  22831  0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988  0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579  0 +     59866 C
e Trachypithecus_phayrei.ctg124                             252848  0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                         7609  0 -     13050 C
e Trachypithecus_melamera.k141_591572                          615  0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     7187  0 +     22490 C
e Trachypithecus_laotum.k141_928651                          25744  0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      27707  0 -     64340 C
e Trachypithecus_germaini.k141_57262                          6693  0 -     28527 C
e Trachypithecus_geei.k141_1001272                           25885  0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      25768  0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       17543  0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     30906  0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        18222  0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    477420  0 -    610378 C
e Theropithecus_gelada.CM009954.1                           350535  0 - 186847797 C
e Tarsius_wallacei.k141_226975                                4794  0 +     20590 C
e Tarsius_lariang.k141_1780720                                4755  0 +      6850 C
e Tapirus_terrestris.TapTer_scaffold_755                    103056  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      189100  0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382  0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377  0 +     22964 C
e Symphalangus_syndactylus.tarseq_199                       388305  0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274  0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1866045  0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078  0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000  0 +     77746 C
e Semnopithecus_vetulus.k141_244474                          26080  0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     23011  0 -     29113 C
e Semnopithecus_priam.k141_714795                            20331  0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12673  0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      26177  0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22658  0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762  0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           5632  0 +     21866 C
e Sapajus_apella.ctg103                                     236042  0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954  0 -      4301 C
e Saguinus_mystax.k141_8077960                                1588  0 +      5979 C
e Saguinus_midas.LG03                                       388907  0 - 209938924 C
e Saguinus_labiatus.k141_1571581                              1785  0 -      2099 C
e Saguinus_inustus.k141_2469308                               1640  0 +      5932 C
e Saguinus_imperator.k141_1898058                             1586  0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             1567  0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1559  0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553  0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             233778  0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104119518  0 + 195417433 C
e Rhinopithecus_bieti.k119_221883                            26170  0 +     27361 C
e Rhinolophus_sinicus.LVEH01000134.1                       2911225  0 +   3329780 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575  0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3535136  0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5838570  0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            49602  0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969  0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       92332  0 -     98465 C
e Propithecus_perrieri.k141_1496898                          32061  0 +     46564 C
e Propithecus_edwardsi.k141_635656                            5736  0 -     30655 C
e Propithecus_diadema.k141_153680                             2000  0 -     11706 C
e Propithecus_coronatus.k141_209299                           1403  0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1563767  0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145  0 -     80239 C
e Presbytis_comata.k141_1230337                              24950  0 +     69807 C
e Plecturocebus_moloch.k141_1031110                          41783  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          40315  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      12399  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          5463  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          40420  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          5466  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     40767  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       40374  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                           970  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        5885  0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              554439  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           29470  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         29707  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               29431  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          3692  0 -     25401 C
e Pithecia_albicans.k141_1239476                             62596  0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564  0 +     22231 C
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453  0 +      5735 C
e Piliocolobus_kirkii.k141_579682                            44775  0 +     45295 C
e Piliocolobus_gordonorum.k141_905727                        62176  0 -     63152 C
e Piliocolobus_badius.k141_2495623                            6468  0 +      7560 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589  0 +     78924 C
e Papio_ursinus.k141_2278143                                 19614  0 -     23640 C
e Papio_papio.k141_799093                                    12804  0 +     16796 C
e Papio_kindae.k141_2214839                                  19668  0 -     27687 C
e Papio_hamadryas.Contig39                                  288052  0 -  20919399 C
e Papio_cynocephalus.k141_1507553                             7013  0 +     21308 C
e Papio_anubis.CM001495.2                                   240549  0 - 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18459255  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21929  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789  0 +    107918 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447  0 -     54323 C
e Nomascus_siki_b.tarseq_93                            8411333  0 -  22158432 C
e Nomascus_gabriellae.k141_57920                             13049  0 +     22201 C
e Nomascus_concolor.k141_735679                               7164  0 -     16345 C
e Nomascus_annamensis.k141_1771965                           51069  0 -    132029 C
e Noctilio_leporinus.NocLep_scaffold_7894                   125173  0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317  0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264  0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625  0 +   4330536 C
e Myotis_davidii.KB100139.1                                4384803  0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9790404  0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388  0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   15863  0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536  0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50085  0 -     62432 C
e Miopithecus_ogouensis.k141_1534655                         19736  0 -     27822 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357  0 +    200668 C
e Microcebus_murinus.CM007674.1                           74982290  0 +  93316391 C
e Mico_schneideri.k141_1877700                                     16341  0 -     26561 C
e Mico_humeralifer.k141_1180625                               8390  0 -     12984 C
e Mico_argentatus.k141_582562                                 7606  0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130  0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7498675  0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             218512  0 +    317179 C
e Manis_javanica.JSZB01003497.1                             671221  0 -    737560 C
e Mandrillus_sphinx.Contig270                               354541  0 -    752769 C
e Mandrillus_leucophaeus.scaffold280                        319709  0 +  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942  0 -    270270 C
e Macaca_tonkeana.k141_339739                                  209  0 +     17132 C
e Macaca_thibetana.k99_41370                                 19612  0 +     21031 C
e Macaca_silenus.Contig273                                  268431  0 +    668171 C
e Macaca_siberu.k141_2185972                                 42498  0 +     59329 C
e Macaca_radiata.k141_3557992                                22677  0 +     24253 C
e Macaca_nigra.k141_2818840                                  46022  0 -     62418 C
e Macaca_nemestrina.KQ007038.1                              396858  0 +  25927173 C
e Macaca_mulatta.NC_041758.1                                412635  0 - 187317192 C
e Macaca_maura.k141_1103459                                  43467  0 +     51645 C
e Macaca_leonina.k141_321385                                 33696  0 -     50087 C
e Macaca_fuscata.k119_546792                                 22506  0 +     30527 C
e Macaca_fascicularis.k141_1397292                           19657  0 -     24934 C
e Macaca_cyclopis.k119_263443                                22554  0 +     30207 C
e Macaca_assamensis.Contig5                                 370299  0 -  60120075 C
e Macaca_arctoides.k141_1757516                              42638  0 -     61512 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321  0 -   1826925 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679  0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          6685  0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              6675  0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          6678  0 +     29618 C
e Leontopithecus_rosalia.k141_349454                          9242  0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     7861  0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        1228  0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           1597  0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        1646  0 -     13097 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517  0 -     65777 C
e Lagothrix_lagothricha.k141_246028                          40966  0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Indri_indri.k141_4600452                                    1394  0 -      1527 C
e Ictidomys_tridecemlineatus.JH393364.1                     384476  0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837  0 +  11177569 C
e Hylobates_pileatus_b.LG02                                       2049482 477 + 191637585 I
e Hylobates_klossii.k141_738755                              10363  0 +     55766 C
e Hylobates_agilis.k141_1155965                               3180  0 +     12352 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590  0 +     83186 C
e Hoolock_leuconedys.ctg274                                    140145  0 -    630532 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47193  0 +     49977 C
e Hipposideros_armiger.JXIK01000431.1                      1547877  0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109  0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737  0 +     18121 C
e Felis_nigripes.FelNig_flattened_line_31944                 25108  0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113760 245 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Erythrocebus_patas.Contig38                               260217  0 +  21539334 C
e Equus_przewalskii.KK951119.1                              409840  0 -    498745 C
e Equus_caballus.CM000403.2                               21373054  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3039120  0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12576040  0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           10200  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          28236  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976  0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924  0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139  0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271  0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549  0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604  0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427  0 -      8242 C
e Condylura_cristata.JH655891.1                           35804984  0 +  53390261 C
e Colobus_polykomos.k141_1559707                              6362  0 -      6605 C
e Colobus_guereza.LG01                                      376350  0 - 200372422 C
e Colobus_angolensis.KN981557.1                             406473  0 -   2368649 C
e Chlorocebus_sabaeus.CM001947.1                            302019  0 - 135778131 C
e Chlorocebus_pygerythrus.k141_3063162                        7239  0 -     44032 C
e Chlorocebus_aethiops.ctg25                                340694  0 +  18827391 C
e Chiropotes_sagulatus.k141_1113111                           5818  0 +     34062 C
e Chiropotes_israelita.k141_313004                           40246  0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           1561  0 +      5346 C
e Cheracebus_torquatus.k141_890198                           17175  0 +     39636 C
e Cheracebus_regulus.k141_471822                             17391  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             17127  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             6714  0 -     32913 C
e Cheirogaleus_medius.k141_759766                             2852  0 -     15404 C
e Cheirogaleus_major.k141_666340                             28322  0 -     33796 C
e Cercopithecus_roloway.k141_3012935                         19797  0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           22872  0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         1353  0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       25200  0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        29380  0 -     45857 C
e Cercopithecus_mona.ctg39                                  267919  0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  362211  0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                            9612  0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          24903  0 -     34525 C
e Cercopithecus_diana.k141_132293                             9181  0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           4991  0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        25022  0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          41924  0 -    148725 C
e Cercocebus_lunulatus.k141_2779015                          41941  0 -     44860 C
e Cercocebus_chrysogaster.k141_1522556                       42108  0 +     47900 C
e Cercocebus_atys.KQ010504.1                                138368  0 -   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680  0 +     27315 C
e Cephalopachus_bancanus.k141_72622                           1235  0 -      1636 C
e Cebus_unicolor.k141_1654760                                64802  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                5707  0 -     34880 C
e Cebus_albifrons.Contig27                                  368818  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               40615  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           2729  0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094  0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           268063  0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443  0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165451150  0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           16195  0 +     17162 C
e Callimico_goeldii.k141_1609886                              7497  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         18339  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  18426  0 +     95584 C
e Cacajao_calvus.k141_89051                                  40900  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   5606  0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889  0 -     19611 C
e Avahi_laniger.k141_2756659                                  3888  0 +     11645 C
e Ateles_paniscus.k141_866194                                20710  0 -     33135 C
e Ateles_marginatus.k141_970259                              46651  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              31280  0 +     44353 C
e Ateles_chamek.k141_615173                                   3727  0 -     28759 C
e Ateles_belzebuth.k141_1572163                               8590  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               272423  0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732  0 -     32367 C
e Aotus_vociferans.k141_944972                                6977  0 +      8415 C
e Aotus_trivirgatus.k141_192090                              21841  0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                670199  0 +   5030052 C
e Aotus_griseimembra.k141_982342                             42186  0 +     43593 C
e Aotus_azarae.k141_118258                                   48439  0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387  0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624  0 +     42133 C
e Alouatta_puruensis.k141_251022                              6485  0 +     30854 C
e Alouatta_palliata.k141_638677                              44360  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             38662  0 +     45454 C
e Alouatta_macconnelli.k141_361275                           21679  0 -     24835 C
e Alouatta_juara.k141_1687208                                40033  0 -     64179 C
e Alouatta_discolor.k141_2561099                             41595  0 +     55831 C
e Alouatta_caraya.k141_1109140                               42145  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             69916  0 -     84148 C
e Allochrocebus_lhoesti.k141_441277                          41129  0 +     44087 C
e Allenopithecus_nigroviridis.k141_3755588                   45208  0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    15727  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       2482 55 +     36723 tctccttcac---------------------------caccatagaattaggt-ggcttctgcagatatggctaag------------------tcttctc
s Gorilla_beringei.k141_3358147                               2493 55 -      8343 tctccttcac---------------------------caccatagaattaggt-ggcttctgcagatacggctaag------------------tcttctc
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 68083 55 +  33314783 tctccttcac---------------------------cacCATAgaattaggt-ggcttctgcagatacggctaag------------------tcttctc
i Gorilla_gorilla.LT578336.1                             C 0 C 0
s Pan_troglodytes.CM009242.2                               1469870 70 - 189151597 tctccttcac---------------------------caccatagaattaggt-ggcttctgcaaatatggctaagAGCTTAACAACCCAACagtctt---
i Pan_troglodytes.CM009242.2                             I 450 I 3
s Pongo_abelii.CM009266.2                                   174999 82 - 189387572 TCTCCTTCACCATAGGattaatgatttatattttcaccATCATAGGATTTGGT-GGCTTCTGCAGATATGGCTAag------------------TCTTCTC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189949  1 -   9816681 ----------------------------------------------------------------------------------------------------C
i Pongo_pygmaeus.ctg66                                   I 1 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991  0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     29661  0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_28053       37455  0 +     38305 C
e Octodon_degus.JH651603.1                                11044981  0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949  0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1924707  0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606  0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254  0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    96011  0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   1279  0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627  0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       60200  0 -     66877 C
e Cavia_porcellus.DS562891.1                               4997099  0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4993657  0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    41667  4 +    145209 I
e Echinops_telfairi.JH980293.1                            62851351  4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              11056  4 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408  0 -  20541912 C
e Pygathrix_nigripes_a.k141_215492                              5211  0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  150834  0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             24341  0 +     91421 C
e Callibella_humilis.k141_1233062                             7834  0 +     18648 C
e Perodicticus_potto.k141_1854441                            15139  0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          22769  0 +     31479 C
e Otolemur_garnettii.GL873799.1                             349529  0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        36515  0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929  0 - 199412804 C
e Nycticebus_coucang.k141_8166032                             2064  1 +      2758 I
e Nycticebus_bengalensis.LG01                             93632675  0 + 196305487 C
e Loris_tardigradus.ctg83                                  5041044  0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            7384  0 +     19643 C
e Galagoides_demidoff.k141_561628                            16986  0 -     32986 C
e Galago_senegalensis.k141_991736                             4930  0 +     22493 C
e Galago_moholi.ctg3793                                     121389  0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       17350  0 -     45910 C
e Allochrocebus_solatus.k141_3554717                         15445  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         13769  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503  0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2107833  0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495  0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743  0 +      5315 C
e Tupaia_tana.TupTan_flattened_line_394                       5859  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1831343  0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         26391  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102738  0 -    112863 C
e Ursus_maritimus.KK499267.1                                179344  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227  0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        37014  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1449171  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11466383  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14352449  0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23509  0 -     74585 C
e Lycaon_pictus.CM007581.1                                41612373  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810986  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913636  0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104799  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41613218  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          220083  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740  0 -     23171 C
e CanFam4.chr16                                           42503104  0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672  0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834  0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048  0 +      2695 C
e Xerus_inauris.XerIna_scaffold_2302                        171803  0 -    224448 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Varecia_variegata.k141_289850                              21738  0 -    147434 C
e Varecia_rubra.k141_787544                                  22831  0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988  0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579  0 +     59866 C
e Trachypithecus_phayrei.ctg124                             252848  0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                         7609  0 -     13050 C
e Trachypithecus_melamera.k141_591572                          615  0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     7187  0 +     22490 C
e Trachypithecus_laotum.k141_928651                          25744  0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      27707  0 -     64340 C
e Trachypithecus_germaini.k141_57262                          6693  0 -     28527 C
e Trachypithecus_geei.k141_1001272                           25885  0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      25768  0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       17543  0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     30906  0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        18222  0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    477420  0 -    610378 C
e Theropithecus_gelada.CM009954.1                           350535  0 - 186847797 C
e Tarsius_wallacei.k141_226975                                4794  0 +     20590 C
e Tarsius_lariang.k141_1780720                                4755  0 +      6850 C
e Tapirus_terrestris.TapTer_scaffold_755                    103056  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      189100  0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382  0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377  0 +     22964 C
e Symphalangus_syndactylus.tarseq_199                       388305  0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274  0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1866045  0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078  0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000  0 +     77746 C
e Semnopithecus_vetulus.k141_244474                          26080  0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     23011  0 -     29113 C
e Semnopithecus_priam.k141_714795                            20331  0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12673  0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      26177  0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22658  0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762  0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           5632  0 +     21866 C
e Sapajus_apella.ctg103                                     236042  0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954  0 -      4301 C
e Saguinus_mystax.k141_8077960                                1588  0 +      5979 C
e Saguinus_midas.LG03                                       388907  0 - 209938924 C
e Saguinus_labiatus.k141_1571581                              1785  0 -      2099 C
e Saguinus_inustus.k141_2469308                               1640  0 +      5932 C
e Saguinus_imperator.k141_1898058                             1586  0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             1567  0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1559  0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553  0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             233778  0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104119518  0 + 195417433 C
e Rhinopithecus_bieti.k119_221883                            26170  0 +     27361 C
e Rhinolophus_sinicus.LVEH01000134.1                       2911225  0 +   3329780 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575  0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3535136  0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5838570  0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            49602  0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969  0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       92332  0 -     98465 C
e Propithecus_perrieri.k141_1496898                          32061  0 +     46564 C
e Propithecus_edwardsi.k141_635656                            5736  0 -     30655 C
e Propithecus_diadema.k141_153680                             2000  0 -     11706 C
e Propithecus_coronatus.k141_209299                           1403  0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1563767  0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145  0 -     80239 C
e Presbytis_comata.k141_1230337                              24950  0 +     69807 C
e Plecturocebus_moloch.k141_1031110                          41783  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          40315  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      12399  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          5463  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          40420  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          5466  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     40767  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       40374  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                           970  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        5885  0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              554439  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           29470  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         29707  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               29431  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          3692  0 -     25401 C
e Pithecia_albicans.k141_1239476                             62596  0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564  0 +     22231 C
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453  0 +      5735 C
e Piliocolobus_kirkii.k141_579682                            44775  0 +     45295 C
e Piliocolobus_gordonorum.k141_905727                        62176  0 -     63152 C
e Piliocolobus_badius.k141_2495623                            6468  0 +      7560 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589  0 +     78924 C
e Papio_ursinus.k141_2278143                                 19614  0 -     23640 C
e Papio_papio.k141_799093                                    12804  0 +     16796 C
e Papio_kindae.k141_2214839                                  19668  0 -     27687 C
e Papio_hamadryas.Contig39                                  288052  0 -  20919399 C
e Papio_cynocephalus.k141_1507553                             7013  0 +     21308 C
e Papio_anubis.CM001495.2                                   240549  0 - 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18459255  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21929  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789  0 +    107918 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447  0 -     54323 C
e Nomascus_siki_b.tarseq_93                            8411333  0 -  22158432 C
e Nomascus_gabriellae.k141_57920                             13049  0 +     22201 C
e Nomascus_concolor.k141_735679                               7164  0 -     16345 C
e Nomascus_annamensis.k141_1771965                           51069  0 -    132029 C
e Noctilio_leporinus.NocLep_scaffold_7894                   125173  0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317  0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264  0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625  0 +   4330536 C
e Myotis_davidii.KB100139.1                                4384803  0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9790404  0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388  0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   15863  0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536  0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50085  0 -     62432 C
e Miopithecus_ogouensis.k141_1534655                         19736  0 -     27822 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357  0 +    200668 C
e Microcebus_murinus.CM007674.1                           74982290  0 +  93316391 C
e Mico_schneideri.k141_1877700                                     16341  0 -     26561 C
e Mico_humeralifer.k141_1180625                               8390  0 -     12984 C
e Mico_argentatus.k141_582562                                 7606  0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130  0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7498675  0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             218512  0 +    317179 C
e Manis_javanica.JSZB01003497.1                             671221  0 -    737560 C
e Mandrillus_sphinx.Contig270                               354541  0 -    752769 C
e Mandrillus_leucophaeus.scaffold280                        319709  0 +  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942  0 -    270270 C
e Macaca_tonkeana.k141_339739                                  209  0 +     17132 C
e Macaca_thibetana.k99_41370                                 19612  0 +     21031 C
e Macaca_silenus.Contig273                                  268431  0 +    668171 C
e Macaca_siberu.k141_2185972                                 42498  0 +     59329 C
e Macaca_radiata.k141_3557992                                22677  0 +     24253 C
e Macaca_nigra.k141_2818840                                  46022  0 -     62418 C
e Macaca_nemestrina.KQ007038.1                              396858  0 +  25927173 C
e Macaca_mulatta.NC_041758.1                                412635  0 - 187317192 C
e Macaca_maura.k141_1103459                                  43467  0 +     51645 C
e Macaca_leonina.k141_321385                                 33696  0 -     50087 C
e Macaca_fuscata.k119_546792                                 22506  0 +     30527 C
e Macaca_fascicularis.k141_1397292                           19657  0 -     24934 C
e Macaca_cyclopis.k119_263443                                22554  0 +     30207 C
e Macaca_assamensis.Contig5                                 370299  0 -  60120075 C
e Macaca_arctoides.k141_1757516                              42638  0 -     61512 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321  0 -   1826925 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679  0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          6685  0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              6675  0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          6678  0 +     29618 C
e Leontopithecus_rosalia.k141_349454                          9242  0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     7861  0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        1228  0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           1597  0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        1646  0 -     13097 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517  0 -     65777 C
e Lagothrix_lagothricha.k141_246028                          40966  0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Indri_indri.k141_4600452                                    1394  0 -      1527 C
e Ictidomys_tridecemlineatus.JH393364.1                     384476  0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837  0 +  11177569 C
e Hylobates_pileatus_b.LG02                                       2049482 477 + 191637585 I
e Hylobates_klossii.k141_738755                              10363  0 +     55766 C
e Hylobates_agilis.k141_1155965                               3180  0 +     12352 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590  0 +     83186 C
e Hoolock_leuconedys.ctg274                                    140145  0 -    630532 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47193  0 +     49977 C
e Hipposideros_armiger.JXIK01000431.1                      1547877  0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109  0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737  0 +     18121 C
e Felis_nigripes.FelNig_flattened_line_31944                 25108  0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113760 245 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Erythrocebus_patas.Contig38                               260217  0 +  21539334 C
e Equus_przewalskii.KK951119.1                              409840  0 -    498745 C
e Equus_caballus.CM000403.2                               21373054  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3039120  0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12576040  0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           10200  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          28236  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976  0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924  0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139  0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271  0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549  0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604  0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427  0 -      8242 C
e Condylura_cristata.JH655891.1                           35804984  0 +  53390261 C
e Colobus_polykomos.k141_1559707                              6362  0 -      6605 C
e Colobus_guereza.LG01                                      376350  0 - 200372422 C
e Colobus_angolensis.KN981557.1                             406473  0 -   2368649 C
e Chlorocebus_sabaeus.CM001947.1                            302019  0 - 135778131 C
e Chlorocebus_pygerythrus.k141_3063162                        7239  0 -     44032 C
e Chlorocebus_aethiops.ctg25                                340694  0 +  18827391 C
e Chiropotes_sagulatus.k141_1113111                           5818  0 +     34062 C
e Chiropotes_israelita.k141_313004                           40246  0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           1561  0 +      5346 C
e Cheracebus_torquatus.k141_890198                           17175  0 +     39636 C
e Cheracebus_regulus.k141_471822                             17391  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             17127  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             6714  0 -     32913 C
e Cheirogaleus_medius.k141_759766                             2852  0 -     15404 C
e Cheirogaleus_major.k141_666340                             28322  0 -     33796 C
e Cercopithecus_roloway.k141_3012935                         19797  0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           22872  0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         1353  0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       25200  0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        29380  0 -     45857 C
e Cercopithecus_mona.ctg39                                  267919  0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  362211  0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                            9612  0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          24903  0 -     34525 C
e Cercopithecus_diana.k141_132293                             9181  0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           4991  0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        25022  0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          41924  0 -    148725 C
e Cercocebus_lunulatus.k141_2779015                          41941  0 -     44860 C
e Cercocebus_chrysogaster.k141_1522556                       42108  0 +     47900 C
e Cercocebus_atys.KQ010504.1                                138368  0 -   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680  0 +     27315 C
e Cephalopachus_bancanus.k141_72622                           1235  0 -      1636 C
e Cebus_unicolor.k141_1654760                                64802  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                5707  0 -     34880 C
e Cebus_albifrons.Contig27                                  368818  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               40615  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           2729  0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094  0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           268063  0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443  0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165451150  0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           16195  0 +     17162 C
e Callimico_goeldii.k141_1609886                              7497  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         18339  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  18426  0 +     95584 C
e Cacajao_calvus.k141_89051                                  40900  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   5606  0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889  0 -     19611 C
e Avahi_laniger.k141_2756659                                  3888  0 +     11645 C
e Ateles_paniscus.k141_866194                                20710  0 -     33135 C
e Ateles_marginatus.k141_970259                              46651  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              31280  0 +     44353 C
e Ateles_chamek.k141_615173                                   3727  0 -     28759 C
e Ateles_belzebuth.k141_1572163                               8590  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               272423  0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732  0 -     32367 C
e Aotus_vociferans.k141_944972                                6977  0 +      8415 C
e Aotus_trivirgatus.k141_192090                              21841  0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                670199  0 +   5030052 C
e Aotus_griseimembra.k141_982342                             42186  0 +     43593 C
e Aotus_azarae.k141_118258                                   48439  0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387  0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624  0 +     42133 C
e Alouatta_puruensis.k141_251022                              6485  0 +     30854 C
e Alouatta_palliata.k141_638677                              44360  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             38662  0 +     45454 C
e Alouatta_macconnelli.k141_361275                           21679  0 -     24835 C
e Alouatta_juara.k141_1687208                                40033  0 -     64179 C
e Alouatta_discolor.k141_2561099                             41595  0 +     55831 C
e Alouatta_caraya.k141_1109140                               42145  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             69916  0 -     84148 C
e Allochrocebus_lhoesti.k141_441277                          41129  0 +     44087 C
e Allenopithecus_nigroviridis.k141_3755588                   45208  0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    15727  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       2537 53 +     36723 cttcaccaccatagaattaggaggc---ttctgc-agatatggc-taaatcttctcct
s Gorilla_beringei.k141_3358147                               2548 39 -      8343 cttcaacttcatagaattaggtggc---ttctgc-agatatgg---------------
i Gorilla_beringei.k141_3358147                          C 0 I 14
s Gorilla_gorilla.LT578336.1                                 68138 18 +  33314783 cttcacC--CATAGAATTAG--------------------------------------
i Gorilla_gorilla.LT578336.1                             C 0 C 0
s Pan_troglodytes.CM009242.2                               1469943 53 - 189151597 cttcaccaccataggattaaatggc---ttctgc-agatatggc-taaatcttctcct
i Pan_troglodytes.CM009242.2                             I 3 T 761
s Pongo_abelii.CM009266.2                                   175081 47 - 189387572 CTTCACCatCATaggattagatgga---ttctgc-agatacggc-taagtCT------
i Pongo_abelii.CM009266.2                                C 0 I 12
s Pongo_pygmaeus.ctg66                                      189950 20 -   9816681 CTTCACCACCATAGAATTAG--------------------------------------
i Pongo_pygmaeus.ctg66                                   C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991  0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     29661  0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_28053       37455  0 +     38305 C
e Octodon_degus.JH651603.1                                11044981  0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949  0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1924707  0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606  0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254  0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    96011  0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   1279  0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627  0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       60200  0 -     66877 C
e Cavia_porcellus.DS562891.1                               4997099  0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4993657  0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    41667  4 +    145209 I
e Echinops_telfairi.JH980293.1                            62851351  4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              11056  4 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408  0 -  20541912 C
e Pygathrix_nigripes_a.k141_215492                              5211  0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  150834  0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             24341  0 +     91421 C
e Callibella_humilis.k141_1233062                             7834  0 +     18648 C
e Perodicticus_potto.k141_1854441                            15139  0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          22769  0 +     31479 C
e Otolemur_garnettii.GL873799.1                             349529  0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        36515  0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929  0 - 199412804 C
e Nycticebus_coucang.k141_8166032                             2064  1 +      2758 I
e Nycticebus_bengalensis.LG01                             93632675  0 + 196305487 C
e Loris_tardigradus.ctg83                                  5041044  0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            7384  0 +     19643 C
e Galagoides_demidoff.k141_561628                            16986  0 -     32986 C
e Galago_senegalensis.k141_991736                             4930  0 +     22493 C
e Galago_moholi.ctg3793                                     121389  0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       17350  0 -     45910 C
e Allochrocebus_solatus.k141_3554717                         15445  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         13769  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503  0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2107833  0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495  0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743  0 +      5315 C
e Tupaia_tana.TupTan_flattened_line_394                       5859  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1831343  0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         26391  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102738  0 -    112863 C
e Ursus_maritimus.KK499267.1                                179344  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227  0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        37014  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1449171  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11466383  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14352449  0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23509  0 -     74585 C
e Lycaon_pictus.CM007581.1                                41612373  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810986  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913636  0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104799  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41613218  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          220083  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740  0 -     23171 C
e CanFam4.chr16                                           42503104  0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672  0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834  0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048  0 +      2695 C
e Xerus_inauris.XerIna_scaffold_2302                        171803  0 -    224448 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Varecia_variegata.k141_289850                              21738  0 -    147434 C
e Varecia_rubra.k141_787544                                  22831  0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988  0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579  0 +     59866 C
e Trachypithecus_phayrei.ctg124                             252848  0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                         7609  0 -     13050 C
e Trachypithecus_melamera.k141_591572                          615  0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     7187  0 +     22490 C
e Trachypithecus_laotum.k141_928651                          25744  0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      27707  0 -     64340 C
e Trachypithecus_germaini.k141_57262                          6693  0 -     28527 C
e Trachypithecus_geei.k141_1001272                           25885  0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      25768  0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       17543  0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     30906  0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        18222  0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    477420  0 -    610378 C
e Theropithecus_gelada.CM009954.1                           350535  0 - 186847797 C
e Tarsius_wallacei.k141_226975                                4794  0 +     20590 C
e Tarsius_lariang.k141_1780720                                4755  0 +      6850 C
e Tapirus_terrestris.TapTer_scaffold_755                    103056  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      189100  0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382  0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377  0 +     22964 C
e Symphalangus_syndactylus.tarseq_199                       388305  0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274  0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1866045  0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078  0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000  0 +     77746 C
e Semnopithecus_vetulus.k141_244474                          26080  0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     23011  0 -     29113 C
e Semnopithecus_priam.k141_714795                            20331  0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12673  0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      26177  0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22658  0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762  0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           5632  0 +     21866 C
e Sapajus_apella.ctg103                                     236042  0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954  0 -      4301 C
e Saguinus_mystax.k141_8077960                                1588  0 +      5979 C
e Saguinus_midas.LG03                                       388907  0 - 209938924 C
e Saguinus_labiatus.k141_1571581                              1785  0 -      2099 C
e Saguinus_inustus.k141_2469308                               1640  0 +      5932 C
e Saguinus_imperator.k141_1898058                             1586  0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             1567  0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1559  0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553  0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             233778  0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104119518  0 + 195417433 C
e Rhinopithecus_bieti.k119_221883                            26170  0 +     27361 C
e Rhinolophus_sinicus.LVEH01000134.1                       2911225  0 +   3329780 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575  0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3535136  0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5838570  0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            49602  0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969  0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       92332  0 -     98465 C
e Propithecus_perrieri.k141_1496898                          32061  0 +     46564 C
e Propithecus_edwardsi.k141_635656                            5736  0 -     30655 C
e Propithecus_diadema.k141_153680                             2000  0 -     11706 C
e Propithecus_coronatus.k141_209299                           1403  0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1563767  0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145  0 -     80239 C
e Presbytis_comata.k141_1230337                              24950  0 +     69807 C
e Plecturocebus_moloch.k141_1031110                          41783  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          40315  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      12399  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          5463  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          40420  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          5466  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     40767  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       40374  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                           970  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        5885  0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              554439  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           29470  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         29707  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               29431  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          3692  0 -     25401 C
e Pithecia_albicans.k141_1239476                             62596  0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564  0 +     22231 C
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453  0 +      5735 C
e Piliocolobus_kirkii.k141_579682                            44775  0 +     45295 C
e Piliocolobus_gordonorum.k141_905727                        62176  0 -     63152 C
e Piliocolobus_badius.k141_2495623                            6468  0 +      7560 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589  0 +     78924 C
e Papio_ursinus.k141_2278143                                 19614  0 -     23640 C
e Papio_papio.k141_799093                                    12804  0 +     16796 C
e Papio_kindae.k141_2214839                                  19668  0 -     27687 C
e Papio_hamadryas.Contig39                                  288052  0 -  20919399 C
e Papio_cynocephalus.k141_1507553                             7013  0 +     21308 C
e Papio_anubis.CM001495.2                                   240549  0 - 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18459255  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21929  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789  0 +    107918 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447  0 -     54323 C
e Nomascus_siki_b.tarseq_93                            8411333  0 -  22158432 C
e Nomascus_gabriellae.k141_57920                             13049  0 +     22201 C
e Nomascus_concolor.k141_735679                               7164  0 -     16345 C
e Nomascus_annamensis.k141_1771965                           51069  0 -    132029 C
e Noctilio_leporinus.NocLep_scaffold_7894                   125173  0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317  0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264  0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625  0 +   4330536 C
e Myotis_davidii.KB100139.1                                4384803  0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9790404  0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388  0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   15863  0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536  0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50085  0 -     62432 C
e Miopithecus_ogouensis.k141_1534655                         19736  0 -     27822 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357  0 +    200668 C
e Microcebus_murinus.CM007674.1                           74982290  0 +  93316391 C
e Mico_schneideri.k141_1877700                                     16341  0 -     26561 C
e Mico_humeralifer.k141_1180625                               8390  0 -     12984 C
e Mico_argentatus.k141_582562                                 7606  0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130  0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7498675  0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             218512  0 +    317179 C
e Manis_javanica.JSZB01003497.1                             671221  0 -    737560 C
e Mandrillus_sphinx.Contig270                               354541  0 -    752769 C
e Mandrillus_leucophaeus.scaffold280                        319709  0 +  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942  0 -    270270 C
e Macaca_tonkeana.k141_339739                                  209  0 +     17132 C
e Macaca_thibetana.k99_41370                                 19612  0 +     21031 C
e Macaca_silenus.Contig273                                  268431  0 +    668171 C
e Macaca_siberu.k141_2185972                                 42498  0 +     59329 C
e Macaca_radiata.k141_3557992                                22677  0 +     24253 C
e Macaca_nigra.k141_2818840                                  46022  0 -     62418 C
e Macaca_nemestrina.KQ007038.1                              396858  0 +  25927173 C
e Macaca_mulatta.NC_041758.1                                412635  0 - 187317192 C
e Macaca_maura.k141_1103459                                  43467  0 +     51645 C
e Macaca_leonina.k141_321385                                 33696  0 -     50087 C
e Macaca_fuscata.k119_546792                                 22506  0 +     30527 C
e Macaca_fascicularis.k141_1397292                           19657  0 -     24934 C
e Macaca_cyclopis.k119_263443                                22554  0 +     30207 C
e Macaca_assamensis.Contig5                                 370299  0 -  60120075 C
e Macaca_arctoides.k141_1757516                              42638  0 -     61512 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321  0 -   1826925 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679  0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          6685  0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              6675  0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          6678  0 +     29618 C
e Leontopithecus_rosalia.k141_349454                          9242  0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     7861  0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        1228  0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           1597  0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        1646  0 -     13097 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517  0 -     65777 C
e Lagothrix_lagothricha.k141_246028                          40966  0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Indri_indri.k141_4600452                                    1394  0 -      1527 C
e Ictidomys_tridecemlineatus.JH393364.1                     384476  0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837  0 +  11177569 C
e Hylobates_pileatus_b.LG02                                       2049482 477 + 191637585 I
e Hylobates_klossii.k141_738755                              10363  0 +     55766 C
e Hylobates_agilis.k141_1155965                               3180  0 +     12352 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590  0 +     83186 C
e Hoolock_leuconedys.ctg274                                    140145  0 -    630532 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47193  0 +     49977 C
e Hipposideros_armiger.JXIK01000431.1                      1547877  0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109  0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737  0 +     18121 C
e Felis_nigripes.FelNig_flattened_line_31944                 25108  0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113760 245 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Erythrocebus_patas.Contig38                               260217  0 +  21539334 C
e Equus_przewalskii.KK951119.1                              409840  0 -    498745 C
e Equus_caballus.CM000403.2                               21373054  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3039120  0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12576040  0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           10200  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          28236  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976  0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924  0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139  0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271  0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549  0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604  0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427  0 -      8242 C
e Condylura_cristata.JH655891.1                           35804984  0 +  53390261 C
e Colobus_polykomos.k141_1559707                              6362  0 -      6605 C
e Colobus_guereza.LG01                                      376350  0 - 200372422 C
e Colobus_angolensis.KN981557.1                             406473  0 -   2368649 C
e Chlorocebus_sabaeus.CM001947.1                            302019  0 - 135778131 C
e Chlorocebus_pygerythrus.k141_3063162                        7239  0 -     44032 C
e Chlorocebus_aethiops.ctg25                                340694  0 +  18827391 C
e Chiropotes_sagulatus.k141_1113111                           5818  0 +     34062 C
e Chiropotes_israelita.k141_313004                           40246  0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           1561  0 +      5346 C
e Cheracebus_torquatus.k141_890198                           17175  0 +     39636 C
e Cheracebus_regulus.k141_471822                             17391  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             17127  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             6714  0 -     32913 C
e Cheirogaleus_medius.k141_759766                             2852  0 -     15404 C
e Cheirogaleus_major.k141_666340                             28322  0 -     33796 C
e Cercopithecus_roloway.k141_3012935                         19797  0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           22872  0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         1353  0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       25200  0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        29380  0 -     45857 C
e Cercopithecus_mona.ctg39                                  267919  0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  362211  0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                            9612  0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          24903  0 -     34525 C
e Cercopithecus_diana.k141_132293                             9181  0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           4991  0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        25022  0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          41924  0 -    148725 C
e Cercocebus_lunulatus.k141_2779015                          41941  0 -     44860 C
e Cercocebus_chrysogaster.k141_1522556                       42108  0 +     47900 C
e Cercocebus_atys.KQ010504.1                                138368  0 -   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680  0 +     27315 C
e Cephalopachus_bancanus.k141_72622                           1235  0 -      1636 C
e Cebus_unicolor.k141_1654760                                64802  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                5707  0 -     34880 C
e Cebus_albifrons.Contig27                                  368818  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               40615  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           2729  0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094  0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           268063  0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443  0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165451150  0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           16195  0 +     17162 C
e Callimico_goeldii.k141_1609886                              7497  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         18339  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  18426  0 +     95584 C
e Cacajao_calvus.k141_89051                                  40900  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   5606  0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889  0 -     19611 C
e Avahi_laniger.k141_2756659                                  3888  0 +     11645 C
e Ateles_paniscus.k141_866194                                20710  0 -     33135 C
e Ateles_marginatus.k141_970259                              46651  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              31280  0 +     44353 C
e Ateles_chamek.k141_615173                                   3727  0 -     28759 C
e Ateles_belzebuth.k141_1572163                               8590  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               272423  0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732  0 -     32367 C
e Aotus_vociferans.k141_944972                                6977  0 +      8415 C
e Aotus_trivirgatus.k141_192090                              21841  0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                670199  0 +   5030052 C
e Aotus_griseimembra.k141_982342                             42186  0 +     43593 C
e Aotus_azarae.k141_118258                                   48439  0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387  0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624  0 +     42133 C
e Alouatta_puruensis.k141_251022                              6485  0 +     30854 C
e Alouatta_palliata.k141_638677                              44360  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             38662  0 +     45454 C
e Alouatta_macconnelli.k141_361275                           21679  0 -     24835 C
e Alouatta_juara.k141_1687208                                40033  0 -     64179 C
e Alouatta_discolor.k141_2561099                             41595  0 +     55831 C
e Alouatta_caraya.k141_1109140                               42145  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             69916  0 -     84148 C
e Allochrocebus_lhoesti.k141_441277                          41129  0 +     44087 C
e Allenopithecus_nigroviridis.k141_3755588                   45208  0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    15727  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       2590 10 +     36723 tcacca-ccgt
s Gorilla_beringei.k141_3358147                               2601 10 -      8343 tcaccc-ccat
i Gorilla_beringei.k141_3358147                          I 14 C 0
s Pan_troglodytes.NBAG03001968.1                               702 11 -     50635 tcaccacccat
i Pan_troglodytes.NBAG03001968.1                         T 11 I 663
s Pongo_abelii.CM009266.2                                   175140  4 - 189387572 -------CCAT
i Pongo_abelii.CM009266.2                                I 12 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991  0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     29661  0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_28053       37455  0 +     38305 C
e Octodon_degus.JH651603.1                                11044981  0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949  0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1924707  0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606  0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254  0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    96011  0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   1279  0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627  0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       60200  0 -     66877 C
e Cavia_porcellus.DS562891.1                               4997099  0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4993657  0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    41667  4 +    145209 I
e Echinops_telfairi.JH980293.1                            62851351  4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              11056  4 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408  0 -  20541912 C
e Pygathrix_nigripes_a.k141_215492                              5211  0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  150834  0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             24341  0 +     91421 C
e Callibella_humilis.k141_1233062                             7834  0 +     18648 C
e Perodicticus_potto.k141_1854441                            15139  0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          22769  0 +     31479 C
e Otolemur_garnettii.GL873799.1                             349529  0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        36515  0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929  0 - 199412804 C
e Nycticebus_coucang.k141_8166032                             2064  1 +      2758 I
e Nycticebus_bengalensis.LG01                             93632675  0 + 196305487 C
e Loris_tardigradus.ctg83                                  5041044  0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            7384  0 +     19643 C
e Galagoides_demidoff.k141_561628                            16986  0 -     32986 C
e Galago_senegalensis.k141_991736                             4930  0 +     22493 C
e Galago_moholi.ctg3793                                     121389  0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       17350  0 -     45910 C
e Allochrocebus_solatus.k141_3554717                         15445  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         13769  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503  0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2107833  0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495  0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743  0 +      5315 C
e Tupaia_tana.TupTan_flattened_line_394                       5859  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1831343  0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         26391  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102738  0 -    112863 C
e Ursus_maritimus.KK499267.1                                179344  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227  0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        37014  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1449171  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11466383  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14352449  0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23509  0 -     74585 C
e Lycaon_pictus.CM007581.1                                41612373  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810986  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913636  0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104799  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41613218  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          220083  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740  0 -     23171 C
e CanFam4.chr16                                           42503104  0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672  0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834  0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048  0 +      2695 C
e Xerus_inauris.XerIna_scaffold_2302                        171803  0 -    224448 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Varecia_variegata.k141_289850                              21738  0 -    147434 C
e Varecia_rubra.k141_787544                                  22831  0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988  0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579  0 +     59866 C
e Trachypithecus_phayrei.ctg124                             252848  0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                         7609  0 -     13050 C
e Trachypithecus_melamera.k141_591572                          615  0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     7187  0 +     22490 C
e Trachypithecus_laotum.k141_928651                          25744  0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      27707  0 -     64340 C
e Trachypithecus_germaini.k141_57262                          6693  0 -     28527 C
e Trachypithecus_geei.k141_1001272                           25885  0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      25768  0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       17543  0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     30906  0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        18222  0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    477420  0 -    610378 C
e Theropithecus_gelada.CM009954.1                           350535  0 - 186847797 C
e Tarsius_wallacei.k141_226975                                4794  0 +     20590 C
e Tarsius_lariang.k141_1780720                                4755  0 +      6850 C
e Tapirus_terrestris.TapTer_scaffold_755                    103056  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      189100  0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382  0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377  0 +     22964 C
e Symphalangus_syndactylus.tarseq_199                       388305  0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274  0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1866045  0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078  0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000  0 +     77746 C
e Semnopithecus_vetulus.k141_244474                          26080  0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     23011  0 -     29113 C
e Semnopithecus_priam.k141_714795                            20331  0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12673  0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      26177  0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22658  0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762  0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           5632  0 +     21866 C
e Sapajus_apella.ctg103                                     236042  0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954  0 -      4301 C
e Saguinus_mystax.k141_8077960                                1588  0 +      5979 C
e Saguinus_midas.LG03                                       388907  0 - 209938924 C
e Saguinus_labiatus.k141_1571581                              1785  0 -      2099 C
e Saguinus_inustus.k141_2469308                               1640  0 +      5932 C
e Saguinus_imperator.k141_1898058                             1586  0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             1567  0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1559  0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553  0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             233778  0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104119518  0 + 195417433 C
e Rhinopithecus_bieti.k119_221883                            26170  0 +     27361 C
e Rhinolophus_sinicus.LVEH01000134.1                       2911225  0 +   3329780 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575  0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3535136  0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5838570  0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            49602  0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969  0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       92332  0 -     98465 C
e Propithecus_perrieri.k141_1496898                          32061  0 +     46564 C
e Propithecus_edwardsi.k141_635656                            5736  0 -     30655 C
e Propithecus_diadema.k141_153680                             2000  0 -     11706 C
e Propithecus_coronatus.k141_209299                           1403  0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1563767  0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145  0 -     80239 C
e Presbytis_comata.k141_1230337                              24950  0 +     69807 C
e Pongo_pygmaeus.ctg66                                      189970  0 -   9816681 C
e Plecturocebus_moloch.k141_1031110                          41783  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          40315  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      12399  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          5463  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          40420  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          5466  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     40767  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       40374  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                           970  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        5885  0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              554439  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           29470  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         29707  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               29431  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          3692  0 -     25401 C
e Pithecia_albicans.k141_1239476                             62596  0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564  0 +     22231 C
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453  0 +      5735 C
e Piliocolobus_kirkii.k141_579682                            44775  0 +     45295 C
e Piliocolobus_gordonorum.k141_905727                        62176  0 -     63152 C
e Piliocolobus_badius.k141_2495623                            6468  0 +      7560 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589  0 +     78924 C
e Papio_ursinus.k141_2278143                                 19614  0 -     23640 C
e Papio_papio.k141_799093                                    12804  0 +     16796 C
e Papio_kindae.k141_2214839                                  19668  0 -     27687 C
e Papio_hamadryas.Contig39                                  288052  0 -  20919399 C
e Papio_cynocephalus.k141_1507553                             7013  0 +     21308 C
e Papio_anubis.CM001495.2                                   240549  0 - 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18459255  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21929  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789  0 +    107918 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447  0 -     54323 C
e Nomascus_siki_b.tarseq_93                            8411333  0 -  22158432 C
e Nomascus_gabriellae.k141_57920                             13049  0 +     22201 C
e Nomascus_concolor.k141_735679                               7164  0 -     16345 C
e Nomascus_annamensis.k141_1771965                           51069  0 -    132029 C
e Noctilio_leporinus.NocLep_scaffold_7894                   125173  0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317  0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264  0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625  0 +   4330536 C
e Myotis_davidii.KB100139.1                                4384803  0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9790404  0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388  0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   15863  0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536  0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50085  0 -     62432 C
e Miopithecus_ogouensis.k141_1534655                         19736  0 -     27822 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357  0 +    200668 C
e Microcebus_murinus.CM007674.1                           74982290  0 +  93316391 C
e Mico_schneideri.k141_1877700                                     16341  0 -     26561 C
e Mico_humeralifer.k141_1180625                               8390  0 -     12984 C
e Mico_argentatus.k141_582562                                 7606  0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130  0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7498675  0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             218512  0 +    317179 C
e Manis_javanica.JSZB01003497.1                             671221  0 -    737560 C
e Mandrillus_sphinx.Contig270                               354541  0 -    752769 C
e Mandrillus_leucophaeus.scaffold280                        319709  0 +  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942  0 -    270270 C
e Macaca_tonkeana.k141_339739                                  209  0 +     17132 C
e Macaca_thibetana.k99_41370                                 19612  0 +     21031 C
e Macaca_silenus.Contig273                                  268431  0 +    668171 C
e Macaca_siberu.k141_2185972                                 42498  0 +     59329 C
e Macaca_radiata.k141_3557992                                22677  0 +     24253 C
e Macaca_nigra.k141_2818840                                  46022  0 -     62418 C
e Macaca_nemestrina.KQ007038.1                              396858  0 +  25927173 C
e Macaca_mulatta.NC_041758.1                                412635  0 - 187317192 C
e Macaca_maura.k141_1103459                                  43467  0 +     51645 C
e Macaca_leonina.k141_321385                                 33696  0 -     50087 C
e Macaca_fuscata.k119_546792                                 22506  0 +     30527 C
e Macaca_fascicularis.k141_1397292                           19657  0 -     24934 C
e Macaca_cyclopis.k119_263443                                22554  0 +     30207 C
e Macaca_assamensis.Contig5                                 370299  0 -  60120075 C
e Macaca_arctoides.k141_1757516                              42638  0 -     61512 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321  0 -   1826925 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679  0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          6685  0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              6675  0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          6678  0 +     29618 C
e Leontopithecus_rosalia.k141_349454                          9242  0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     7861  0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        1228  0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           1597  0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        1646  0 -     13097 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517  0 -     65777 C
e Lagothrix_lagothricha.k141_246028                          40966  0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Indri_indri.k141_4600452                                    1394  0 -      1527 C
e Ictidomys_tridecemlineatus.JH393364.1                     384476  0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837  0 +  11177569 C
e Hylobates_pileatus_b.LG02                                       2049482 477 + 191637585 I
e Hylobates_klossii.k141_738755                              10363  0 +     55766 C
e Hylobates_agilis.k141_1155965                               3180  0 +     12352 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590  0 +     83186 C
e Hoolock_leuconedys.ctg274                                    140145  0 -    630532 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47193  0 +     49977 C
e Hipposideros_armiger.JXIK01000431.1                      1547877  0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109  0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Gorilla_gorilla.LT578336.1                                 68156  0 +  33314783 C
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737  0 +     18121 C
e Felis_nigripes.FelNig_flattened_line_31944                 25108  0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113760 245 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Erythrocebus_patas.Contig38                               260217  0 +  21539334 C
e Equus_przewalskii.KK951119.1                              409840  0 -    498745 C
e Equus_caballus.CM000403.2                               21373054  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3039120  0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12576040  0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           10200  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          28236  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976  0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924  0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139  0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271  0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549  0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604  0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427  0 -      8242 C
e Condylura_cristata.JH655891.1                           35804984  0 +  53390261 C
e Colobus_polykomos.k141_1559707                              6362  0 -      6605 C
e Colobus_guereza.LG01                                      376350  0 - 200372422 C
e Colobus_angolensis.KN981557.1                             406473  0 -   2368649 C
e Chlorocebus_sabaeus.CM001947.1                            302019  0 - 135778131 C
e Chlorocebus_pygerythrus.k141_3063162                        7239  0 -     44032 C
e Chlorocebus_aethiops.ctg25                                340694  0 +  18827391 C
e Chiropotes_sagulatus.k141_1113111                           5818  0 +     34062 C
e Chiropotes_israelita.k141_313004                           40246  0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           1561  0 +      5346 C
e Cheracebus_torquatus.k141_890198                           17175  0 +     39636 C
e Cheracebus_regulus.k141_471822                             17391  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             17127  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             6714  0 -     32913 C
e Cheirogaleus_medius.k141_759766                             2852  0 -     15404 C
e Cheirogaleus_major.k141_666340                             28322  0 -     33796 C
e Cercopithecus_roloway.k141_3012935                         19797  0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           22872  0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         1353  0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       25200  0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        29380  0 -     45857 C
e Cercopithecus_mona.ctg39                                  267919  0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  362211  0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                            9612  0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          24903  0 -     34525 C
e Cercopithecus_diana.k141_132293                             9181  0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           4991  0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        25022  0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          41924  0 -    148725 C
e Cercocebus_lunulatus.k141_2779015                          41941  0 -     44860 C
e Cercocebus_chrysogaster.k141_1522556                       42108  0 +     47900 C
e Cercocebus_atys.KQ010504.1                                138368  0 -   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680  0 +     27315 C
e Cephalopachus_bancanus.k141_72622                           1235  0 -      1636 C
e Cebus_unicolor.k141_1654760                                64802  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                5707  0 -     34880 C
e Cebus_albifrons.Contig27                                  368818  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               40615  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           2729  0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094  0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           268063  0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443  0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165451150  0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           16195  0 +     17162 C
e Callimico_goeldii.k141_1609886                              7497  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         18339  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  18426  0 +     95584 C
e Cacajao_calvus.k141_89051                                  40900  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   5606  0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889  0 -     19611 C
e Avahi_laniger.k141_2756659                                  3888  0 +     11645 C
e Ateles_paniscus.k141_866194                                20710  0 -     33135 C
e Ateles_marginatus.k141_970259                              46651  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              31280  0 +     44353 C
e Ateles_chamek.k141_615173                                   3727  0 -     28759 C
e Ateles_belzebuth.k141_1572163                               8590  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               272423  0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732  0 -     32367 C
e Aotus_vociferans.k141_944972                                6977  0 +      8415 C
e Aotus_trivirgatus.k141_192090                              21841  0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                670199  0 +   5030052 C
e Aotus_griseimembra.k141_982342                             42186  0 +     43593 C
e Aotus_azarae.k141_118258                                   48439  0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387  0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624  0 +     42133 C
e Alouatta_puruensis.k141_251022                              6485  0 +     30854 C
e Alouatta_palliata.k141_638677                              44360  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             38662  0 +     45454 C
e Alouatta_macconnelli.k141_361275                           21679  0 -     24835 C
e Alouatta_juara.k141_1687208                                40033  0 -     64179 C
e Alouatta_discolor.k141_2561099                             41595  0 +     55831 C
e Alouatta_caraya.k141_1109140                               42145  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             69916  0 -     84148 C
e Allochrocebus_lhoesti.k141_441277                          41129  0 +     44087 C
e Allenopithecus_nigroviridis.k141_3755588                   45208  0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    15727  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       2600 46 +     36723 agaatttggaggcttctgcagatacggctaaatcttctccttcacc
s Gorilla_beringei.k141_3358147                               2611 46 -      8343 aggattagatggattctgcagatacggctaagtcttctctttcacc
i Gorilla_beringei.k141_3358147                          C 0 I 326
s Gorilla_gorilla.LT578336.1                                 68156 36 +  33314783 ---------TGGATTCTGCA-ATATGGCTAAGTCTTCTCCTTCACC
i Gorilla_gorilla.LT578336.1                             C 0 I 552
s Pan_troglodytes.CM009242.2                               1469235 46 - 189151597 agaattaggtggcttctgcagatatggctaagtcttcgccttcacc
i Pan_troglodytes.CM009242.2                             T 761 I 723
s Pongo_abelii.CM009266.2                                   175144 46 - 189387572 agaattaggtggcttctgcagatacggctaagtCTTCTCCTTCACC
i Pongo_abelii.CM009266.2                                C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991  0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     29661  0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_28053       37455  0 +     38305 C
e Octodon_degus.JH651603.1                                11044981  0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949  0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1924707  0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606  0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254  0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    96011  0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   1279  0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627  0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       60200  0 -     66877 C
e Cavia_porcellus.DS562891.1                               4997099  0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4993657  0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    41667  4 +    145209 I
e Echinops_telfairi.JH980293.1                            62851351  4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              11056  4 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408  0 -  20541912 C
e Pygathrix_nigripes_a.k141_215492                              5211  0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  150834  0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             24341  0 +     91421 C
e Callibella_humilis.k141_1233062                             7834  0 +     18648 C
e Perodicticus_potto.k141_1854441                            15139  0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          22769  0 +     31479 C
e Otolemur_garnettii.GL873799.1                             349529  0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        36515  0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929  0 - 199412804 C
e Nycticebus_coucang.k141_8166032                             2064  1 +      2758 I
e Nycticebus_bengalensis.LG01                             93632675  0 + 196305487 C
e Loris_tardigradus.ctg83                                  5041044  0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            7384  0 +     19643 C
e Galagoides_demidoff.k141_561628                            16986  0 -     32986 C
e Galago_senegalensis.k141_991736                             4930  0 +     22493 C
e Galago_moholi.ctg3793                                     121389  0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       17350  0 -     45910 C
e Allochrocebus_solatus.k141_3554717                         15445  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         13769  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503  0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2107833  0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495  0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743  0 +      5315 C
e Tupaia_tana.TupTan_flattened_line_394                       5859  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1831343  0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         26391  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102738  0 -    112863 C
e Ursus_maritimus.KK499267.1                                179344  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227  0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        37014  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1449171  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11466383  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14352449  0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23509  0 -     74585 C
e Lycaon_pictus.CM007581.1                                41612373  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810986  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913636  0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104799  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41613218  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          220083  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740  0 -     23171 C
e CanFam4.chr16                                           42503104  0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672  0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834  0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048  0 +      2695 C
e Xerus_inauris.XerIna_scaffold_2302                        171803  0 -    224448 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Varecia_variegata.k141_289850                              21738  0 -    147434 C
e Varecia_rubra.k141_787544                                  22831  0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988  0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579  0 +     59866 C
e Trachypithecus_phayrei.ctg124                             252848  0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                         7609  0 -     13050 C
e Trachypithecus_melamera.k141_591572                          615  0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     7187  0 +     22490 C
e Trachypithecus_laotum.k141_928651                          25744  0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      27707  0 -     64340 C
e Trachypithecus_germaini.k141_57262                          6693  0 -     28527 C
e Trachypithecus_geei.k141_1001272                           25885  0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      25768  0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       17543  0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     30906  0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        18222  0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    477420  0 -    610378 C
e Theropithecus_gelada.CM009954.1                           350535  0 - 186847797 C
e Tarsius_wallacei.k141_226975                                4794  0 +     20590 C
e Tarsius_lariang.k141_1780720                                4755  0 +      6850 C
e Tapirus_terrestris.TapTer_scaffold_755                    103056  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      189100  0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382  0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377  0 +     22964 C
e Symphalangus_syndactylus.tarseq_199                       388305  0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274  0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1866045  0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078  0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000  0 +     77746 C
e Semnopithecus_vetulus.k141_244474                          26080  0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     23011  0 -     29113 C
e Semnopithecus_priam.k141_714795                            20331  0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12673  0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      26177  0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22658  0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762  0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           5632  0 +     21866 C
e Sapajus_apella.ctg103                                     236042  0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954  0 -      4301 C
e Saguinus_mystax.k141_8077960                                1588  0 +      5979 C
e Saguinus_midas.LG03                                       388907  0 - 209938924 C
e Saguinus_labiatus.k141_1571581                              1785  0 -      2099 C
e Saguinus_inustus.k141_2469308                               1640  0 +      5932 C
e Saguinus_imperator.k141_1898058                             1586  0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             1567  0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1559  0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553  0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             233778  0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104119518  0 + 195417433 C
e Rhinopithecus_bieti.k119_221883                            26170  0 +     27361 C
e Rhinolophus_sinicus.LVEH01000134.1                       2911225  0 +   3329780 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575  0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3535136  0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5838570  0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            49602  0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969  0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       92332  0 -     98465 C
e Propithecus_perrieri.k141_1496898                          32061  0 +     46564 C
e Propithecus_edwardsi.k141_635656                            5736  0 -     30655 C
e Propithecus_diadema.k141_153680                             2000  0 -     11706 C
e Propithecus_coronatus.k141_209299                           1403  0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1563767  0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145  0 -     80239 C
e Presbytis_comata.k141_1230337                              24950  0 +     69807 C
e Pongo_pygmaeus.ctg66                                      189970  0 -   9816681 C
e Plecturocebus_moloch.k141_1031110                          41783  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          40315  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      12399  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          5463  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          40420  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          5466  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     40767  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       40374  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                           970  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        5885  0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              554439  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           29470  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         29707  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               29431  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          3692  0 -     25401 C
e Pithecia_albicans.k141_1239476                             62596  0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564  0 +     22231 C
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453  0 +      5735 C
e Piliocolobus_kirkii.k141_579682                            44775  0 +     45295 C
e Piliocolobus_gordonorum.k141_905727                        62176  0 -     63152 C
e Piliocolobus_badius.k141_2495623                            6468  0 +      7560 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589  0 +     78924 C
e Papio_ursinus.k141_2278143                                 19614  0 -     23640 C
e Papio_papio.k141_799093                                    12804  0 +     16796 C
e Papio_kindae.k141_2214839                                  19668  0 -     27687 C
e Papio_hamadryas.Contig39                                  288052  0 -  20919399 C
e Papio_cynocephalus.k141_1507553                             7013  0 +     21308 C
e Papio_anubis.CM001495.2                                   240549  0 - 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18459255  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21929  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789  0 +    107918 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447  0 -     54323 C
e Nomascus_siki_b.tarseq_93                            8411333  0 -  22158432 C
e Nomascus_gabriellae.k141_57920                             13049  0 +     22201 C
e Nomascus_concolor.k141_735679                               7164  0 -     16345 C
e Nomascus_annamensis.k141_1771965                           51069  0 -    132029 C
e Noctilio_leporinus.NocLep_scaffold_7894                   125173  0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317  0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264  0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625  0 +   4330536 C
e Myotis_davidii.KB100139.1                                4384803  0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9790404  0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388  0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   15863  0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536  0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50085  0 -     62432 C
e Miopithecus_ogouensis.k141_1534655                         19736  0 -     27822 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357  0 +    200668 C
e Microcebus_murinus.CM007674.1                           74982290  0 +  93316391 C
e Mico_schneideri.k141_1877700                                     16341  0 -     26561 C
e Mico_humeralifer.k141_1180625                               8390  0 -     12984 C
e Mico_argentatus.k141_582562                                 7606  0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130  0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7498675  0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             218512  0 +    317179 C
e Manis_javanica.JSZB01003497.1                             671221  0 -    737560 C
e Mandrillus_sphinx.Contig270                               354541  0 -    752769 C
e Mandrillus_leucophaeus.scaffold280                        319709  0 +  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942  0 -    270270 C
e Macaca_tonkeana.k141_339739                                  209  0 +     17132 C
e Macaca_thibetana.k99_41370                                 19612  0 +     21031 C
e Macaca_silenus.Contig273                                  268431  0 +    668171 C
e Macaca_siberu.k141_2185972                                 42498  0 +     59329 C
e Macaca_radiata.k141_3557992                                22677  0 +     24253 C
e Macaca_nigra.k141_2818840                                  46022  0 -     62418 C
e Macaca_nemestrina.KQ007038.1                              396858  0 +  25927173 C
e Macaca_mulatta.NC_041758.1                                412635  0 - 187317192 C
e Macaca_maura.k141_1103459                                  43467  0 +     51645 C
e Macaca_leonina.k141_321385                                 33696  0 -     50087 C
e Macaca_fuscata.k119_546792                                 22506  0 +     30527 C
e Macaca_fascicularis.k141_1397292                           19657  0 -     24934 C
e Macaca_cyclopis.k119_263443                                22554  0 +     30207 C
e Macaca_assamensis.Contig5                                 370299  0 -  60120075 C
e Macaca_arctoides.k141_1757516                              42638  0 -     61512 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321  0 -   1826925 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679  0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          6685  0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              6675  0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          6678  0 +     29618 C
e Leontopithecus_rosalia.k141_349454                          9242  0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     7861  0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        1228  0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           1597  0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        1646  0 -     13097 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517  0 -     65777 C
e Lagothrix_lagothricha.k141_246028                          40966  0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Indri_indri.k141_4600452                                    1394  0 -      1527 C
e Ictidomys_tridecemlineatus.JH393364.1                     384476  0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837  0 +  11177569 C
e Hylobates_pileatus_b.LG02                                       2049482 477 + 191637585 I
e Hylobates_klossii.k141_738755                              10363  0 +     55766 C
e Hylobates_agilis.k141_1155965                               3180  0 +     12352 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590  0 +     83186 C
e Hoolock_leuconedys.ctg274                                    140145  0 -    630532 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47193  0 +     49977 C
e Hipposideros_armiger.JXIK01000431.1                      1547877  0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109  0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737  0 +     18121 C
e Felis_nigripes.FelNig_flattened_line_31944                 25108  0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113760 245 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Erythrocebus_patas.Contig38                               260217  0 +  21539334 C
e Equus_przewalskii.KK951119.1                              409840  0 -    498745 C
e Equus_caballus.CM000403.2                               21373054  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3039120  0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12576040  0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           10200  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          28236  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976  0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924  0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139  0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271  0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549  0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604  0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427  0 -      8242 C
e Condylura_cristata.JH655891.1                           35804984  0 +  53390261 C
e Colobus_polykomos.k141_1559707                              6362  0 -      6605 C
e Colobus_guereza.LG01                                      376350  0 - 200372422 C
e Colobus_angolensis.KN981557.1                             406473  0 -   2368649 C
e Chlorocebus_sabaeus.CM001947.1                            302019  0 - 135778131 C
e Chlorocebus_pygerythrus.k141_3063162                        7239  0 -     44032 C
e Chlorocebus_aethiops.ctg25                                340694  0 +  18827391 C
e Chiropotes_sagulatus.k141_1113111                           5818  0 +     34062 C
e Chiropotes_israelita.k141_313004                           40246  0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           1561  0 +      5346 C
e Cheracebus_torquatus.k141_890198                           17175  0 +     39636 C
e Cheracebus_regulus.k141_471822                             17391  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             17127  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             6714  0 -     32913 C
e Cheirogaleus_medius.k141_759766                             2852  0 -     15404 C
e Cheirogaleus_major.k141_666340                             28322  0 -     33796 C
e Cercopithecus_roloway.k141_3012935                         19797  0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           22872  0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         1353  0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       25200  0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        29380  0 -     45857 C
e Cercopithecus_mona.ctg39                                  267919  0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  362211  0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                            9612  0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          24903  0 -     34525 C
e Cercopithecus_diana.k141_132293                             9181  0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           4991  0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        25022  0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          41924  0 -    148725 C
e Cercocebus_lunulatus.k141_2779015                          41941  0 -     44860 C
e Cercocebus_chrysogaster.k141_1522556                       42108  0 +     47900 C
e Cercocebus_atys.KQ010504.1                                138368  0 -   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680  0 +     27315 C
e Cephalopachus_bancanus.k141_72622                           1235  0 -      1636 C
e Cebus_unicolor.k141_1654760                                64802  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                5707  0 -     34880 C
e Cebus_albifrons.Contig27                                  368818  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               40615  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           2729  0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094  0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           268063  0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443  0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165451150  0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           16195  0 +     17162 C
e Callimico_goeldii.k141_1609886                              7497  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         18339  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  18426  0 +     95584 C
e Cacajao_calvus.k141_89051                                  40900  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   5606  0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889  0 -     19611 C
e Avahi_laniger.k141_2756659                                  3888  0 +     11645 C
e Ateles_paniscus.k141_866194                                20710  0 -     33135 C
e Ateles_marginatus.k141_970259                              46651  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              31280  0 +     44353 C
e Ateles_chamek.k141_615173                                   3727  0 -     28759 C
e Ateles_belzebuth.k141_1572163                               8590  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               272423  0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732  0 -     32367 C
e Aotus_vociferans.k141_944972                                6977  0 +      8415 C
e Aotus_trivirgatus.k141_192090                              21841  0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                670199  0 +   5030052 C
e Aotus_griseimembra.k141_982342                             42186  0 +     43593 C
e Aotus_azarae.k141_118258                                   48439  0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387  0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624  0 +     42133 C
e Alouatta_puruensis.k141_251022                              6485  0 +     30854 C
e Alouatta_palliata.k141_638677                              44360  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             38662  0 +     45454 C
e Alouatta_macconnelli.k141_361275                           21679  0 -     24835 C
e Alouatta_juara.k141_1687208                                40033  0 -     64179 C
e Alouatta_discolor.k141_2561099                             41595  0 +     55831 C
e Alouatta_caraya.k141_1109140                               42145  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             69916  0 -     84148 C
e Allochrocebus_lhoesti.k141_441277                          41129  0 +     44087 C
e Allenopithecus_nigroviridis.k141_3755588                   45208  0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    15727  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       2646 104 +     36723 accatagaattaggtggcttctgcaggtatggctaagtcttctccttcaccatcATAGGATTTGGTGGCTTCTGCAGATACGGCTAAGAGCTTAACAACCCAAC
s Gorilla_beringei.k141_3358147                               2983  86 -      8343 accatagaattaggtggcttctgcagatatggctaagtcttctccttcaccatcataggaTTCAGTGGCTTCTGCAGATACGGCTA------------------
i Gorilla_beringei.k141_3358147                          I 326 I 18
s Gorilla_gorilla.LT578341.1                                251994 104 - 186649187 ACCATAGAATTAGGTGGCTTCTGCAGATATGGCTAAGTCTTCTCCTTCACCATCATAGGATTCGGTGGCTTCTGCAGATACGGCTAAGAGCTTAACAACCCAAC
i Gorilla_gorilla.LT578341.1                             I 106 C 0
s Pan_troglodytes.CM009242.2                               1470004 101 - 189151597 ---atagaattaggtggcttctgcagatatggctaagtcttctccttcaccatcataggattcggtggcttctgcagatacggctaagAGCTTAACAACCCAAC
i Pan_troglodytes.CM009242.2                             I 723 C 0
s Pongo_abelii.CM009266.2                                   175190  53 - 189387572 ---------------------------------------------------atCATAGGATTTGGTGGCTTCTGCAGATACAGCTAAGAGCTTAACAACCCAAC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      189970  91 -   9816681 -------------GTGGCTTCTGCAGATATGGCTAAGTCTTCTCCTTCACCATCATAGGATTTGGTGGCTTCTGCAGATACGGCTAAGAGCTTAACAACCCAAC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991   0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     29661   0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_28053       37455   0 +     38305 C
e Octodon_degus.JH651603.1                                11044981   0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949   0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1924707   0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606   0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201   0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254   0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    96011   0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   1279   0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627   0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       60200   0 -     66877 C
e Cavia_porcellus.DS562891.1                               4997099   0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4993657   0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    41667   4 +    145209 I
e Echinops_telfairi.JH980293.1                            62851351   4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              11056   4 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9105070   0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408   0 -  20541912 C
e Pygathrix_nigripes_a.k141_215492                              5211   0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  150834   0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             24341   0 +     91421 C
e Callibella_humilis.k141_1233062                             7834   0 +     18648 C
e Perodicticus_potto.k141_1854441                            15139   0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          22769   0 +     31479 C
e Otolemur_garnettii.GL873799.1                             349529   0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        36515   0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929   0 - 199412804 C
e Nycticebus_coucang.k141_8166032                             2064   1 +      2758 I
e Nycticebus_bengalensis.LG01                             93632675   0 + 196305487 C
e Loris_tardigradus.ctg83                                  5041044   0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            7384   0 +     19643 C
e Galagoides_demidoff.k141_561628                            16986   0 -     32986 C
e Galago_senegalensis.k141_991736                             4930   0 +     22493 C
e Galago_moholi.ctg3793                                     121389   0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       17350   0 -     45910 C
e Allochrocebus_solatus.k141_3554717                         15445   0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         13769   0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503   0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2107833   0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495   0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     13679   3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743   0 +      5315 C
e Tupaia_tana.TupTan_flattened_line_394                       5859   0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1831343   0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         26391   0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102738   0 -    112863 C
e Ursus_maritimus.KK499267.1                                179344   0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224   0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227   0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        37014   0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1449171   0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975   0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11466383   0 -  31847680 C
e Mustela_putorius.JH418006.1                             14352449   0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996   0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23509   0 -     74585 C
e Lycaon_pictus.CM007581.1                                41612373   0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810986   0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913636   0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104799   0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41613218   0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          220083   0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740   0 -     23171 C
e CanFam4.chr16                                           42503104   0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672   0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834   0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048   0 +      2695 C
e Xerus_inauris.XerIna_scaffold_2302                        171803   0 -    224448 C
e Vicugna_pacos.KN270157.1                                   75090   0 +   5488506 C
e Varecia_variegata.k141_289850                              21738   0 -    147434 C
e Varecia_rubra.k141_787544                                  22831   0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988   0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011   0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081   0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579   0 +     59866 C
e Trachypithecus_phayrei.ctg124                             252848   0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                         7609   0 -     13050 C
e Trachypithecus_melamera.k141_591572                          615   0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     7187   0 +     22490 C
e Trachypithecus_laotum.k141_928651                          25744   0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      27707   0 -     64340 C
e Trachypithecus_germaini.k141_57262                          6693   0 -     28527 C
e Trachypithecus_geei.k141_1001272                           25885   0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      25768   0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       17543   0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     30906   0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        18222   0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    477420   0 -    610378 C
e Theropithecus_gelada.CM009954.1                           350535   0 - 186847797 C
e Tarsius_wallacei.k141_226975                                4794   0 +     20590 C
e Tarsius_lariang.k141_1780720                                4755   0 +      6850 C
e Tapirus_terrestris.TapTer_scaffold_755                    103056   0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      189100   0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382   0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377   0 +     22964 C
e Symphalangus_syndactylus.tarseq_199                       388305   0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6639884   0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274   0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1866045   0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078   0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000   0 +     77746 C
e Semnopithecus_vetulus.k141_244474                          26080   0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     23011   0 -     29113 C
e Semnopithecus_priam.k141_714795                            20331   0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12673   0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      26177   0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22658   0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762   0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           5632   0 +     21866 C
e Sapajus_apella.ctg103                                     236042   0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468   0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954   0 -      4301 C
e Saguinus_mystax.k141_8077960                                1588   0 +      5979 C
e Saguinus_midas.LG03                                       388907   0 - 209938924 C
e Saguinus_labiatus.k141_1571581                              1785   0 -      2099 C
e Saguinus_inustus.k141_2469308                               1640   0 +      5932 C
e Saguinus_imperator.k141_1898058                             1586   0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             1567   0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1559   0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553   0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             233778   0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104119518   0 + 195417433 C
e Rhinopithecus_bieti.k119_221883                            26170   0 +     27361 C
e Rhinolophus_sinicus.LVEH01000134.1                       2911225   0 +   3329780 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815   0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575   0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3535136   0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5838570   0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            49602   0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969   0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       92332   0 -     98465 C
e Propithecus_perrieri.k141_1496898                          32061   0 +     46564 C
e Propithecus_edwardsi.k141_635656                            5736   0 -     30655 C
e Propithecus_diadema.k141_153680                             2000   0 -     11706 C
e Propithecus_coronatus.k141_209299                           1403   0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1563767   0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1980511   0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145   0 -     80239 C
e Presbytis_comata.k141_1230337                              24950   0 +     69807 C
e Plecturocebus_moloch.k141_1031110                          41783   0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          40315   0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      12399   0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          5463   0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          40420   0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          5466   0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     40767   0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       40374   0 -     87950 C
e Plecturocebus_brunneus.k141_862875                           970   0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        5885   0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214   0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454   0 +     51125 C
e Pithecia_pithecia.tarseq_165                              554439   0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           29470   0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         29707   0 +     63561 C
e Pithecia_hirsuta.k141_640380                               29431   0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          3692   0 -     25401 C
e Pithecia_albicans.k141_1239476                             62596   0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564   0 +     22231 C
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453   0 +      5735 C
e Piliocolobus_kirkii.k141_579682                            44775   0 +     45295 C
e Piliocolobus_gordonorum.k141_905727                        62176   0 -     63152 C
e Piliocolobus_badius.k141_2495623                            6468   0 +      7560 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130   0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434   0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589   0 +     78924 C
e Papio_ursinus.k141_2278143                                 19614   0 -     23640 C
e Papio_papio.k141_799093                                    12804   0 +     16796 C
e Papio_kindae.k141_2214839                                  19668   0 -     27687 C
e Papio_hamadryas.Contig39                                  288052   0 -  20919399 C
e Papio_cynocephalus.k141_1507553                             7013   0 +     21308 C
e Papio_anubis.CM001495.2                                   240549   0 - 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1614318   0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975   0 +   8748460 C
e Panthera_pardus.KV860321.1                              18459255   0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21929   0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394   0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875   0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566   3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272   0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789   0 +    107918 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957   0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886   0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894   0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447   0 -     54323 C
e Nomascus_siki_b.tarseq_93                            8411333   0 -  22158432 C
e Nomascus_gabriellae.k141_57920                             13049   0 +     22201 C
e Nomascus_concolor.k141_735679                               7164   0 -     16345 C
e Nomascus_annamensis.k141_1771965                           51069   0 -    132029 C
e Noctilio_leporinus.NocLep_scaffold_7894                   125173   0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002   0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317   0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264   0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625   0 +   4330536 C
e Myotis_davidii.KB100139.1                                4384803   0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9790404   0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388   0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   15863   0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907   0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536   0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833   0 +    437263 C
e Mirza_zaza.k141_766280                                     50085   0 -     62432 C
e Miopithecus_ogouensis.k141_1534655                         19736   0 -     27822 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357   0 +    200668 C
e Microcebus_murinus.CM007674.1                           74982290   0 +  93316391 C
e Mico_schneideri.k141_1877700                                     16341   0 -     26561 C
e Mico_humeralifer.k141_1180625                               8390   0 -     12984 C
e Mico_argentatus.k141_582562                                 7606   0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944   0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791   5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130   0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7498675   0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             218512   0 +    317179 C
e Manis_javanica.JSZB01003497.1                             671221   0 -    737560 C
e Mandrillus_sphinx.Contig270                               354541   0 -    752769 C
e Mandrillus_leucophaeus.scaffold280                        319709   0 +  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942   0 -    270270 C
e Macaca_tonkeana.k141_339739                                  209   0 +     17132 C
e Macaca_thibetana.k99_41370                                 19612   0 +     21031 C
e Macaca_silenus.Contig273                                  268431   0 +    668171 C
e Macaca_siberu.k141_2185972                                 42498   0 +     59329 C
e Macaca_radiata.k141_3557992                                22677   0 +     24253 C
e Macaca_nigra.k141_2818840                                  46022   0 -     62418 C
e Macaca_nemestrina.KQ007038.1                              396858   0 +  25927173 C
e Macaca_mulatta.NC_041758.1                                412635   0 - 187317192 C
e Macaca_maura.k141_1103459                                  43467   0 +     51645 C
e Macaca_leonina.k141_321385                                 33696   0 -     50087 C
e Macaca_fuscata.k119_546792                                 22506   0 +     30527 C
e Macaca_fascicularis.k141_1397292                           19657   0 -     24934 C
e Macaca_cyclopis.k119_263443                                22554   0 +     30207 C
e Macaca_assamensis.Contig5                                 370299   0 -  60120075 C
e Macaca_arctoides.k141_1757516                              42638   0 -     61512 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321   0 -   1826925 C
e Lipotes_vexillifer.KE559953.1                             333400   0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679   0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          6685   0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              6675   0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          6678   0 +     29618 C
e Leontopithecus_rosalia.k141_349454                          9242   0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     7861   0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        1228   0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           1597   0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        1646   0 -     13097 C
e Lemur_catta.scaffold_24                                 14757355   0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517   0 -     65777 C
e Lagothrix_lagothricha.k141_246028                          40966   0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366   0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885   0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877   0 -     16823 C
e Indri_indri.k141_4600452                                    1394   0 -      1527 C
e Ictidomys_tridecemlineatus.JH393364.1                     384476   0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837   0 +  11177569 C
e Hylobates_pileatus_b.LG02                                       2049482 477 + 191637585 I
e Hylobates_klossii.k141_738755                              10363   0 +     55766 C
e Hylobates_agilis.k141_1155965                               3180   0 +     12352 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590   0 +     83186 C
e Hoolock_leuconedys.ctg274                                    140145   0 -    630532 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47193   0 +     49977 C
e Hipposideros_armiger.JXIK01000431.1                      1547877   0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354   0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755   0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109   0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707   0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707   0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834   0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965   0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564   0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002   0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737   0 +     18121 C
e Felis_nigripes.FelNig_flattened_line_31944                 25108   0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113760 245 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              56878   0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477   0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754   0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027   0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834   0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204   0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879   0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306   0 +    112731 C
e Eulemur_collaris.k141_601111                               40347   0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635   0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857   0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641   0 -    133382 C
e Erythrocebus_patas.Contig38                               260217   0 +  21539334 C
e Equus_przewalskii.KK951119.1                              409840   0 -    498745 C
e Equus_caballus.CM000403.2                               21373054   0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3039120   0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12576040   0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           10200   0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          28236   0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323   0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976   0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924   0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139   0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090   0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271   0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549   0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604   0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278   5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006   0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427   0 -      8242 C
e Condylura_cristata.JH655891.1                           35804984   0 +  53390261 C
e Colobus_polykomos.k141_1559707                              6362   0 -      6605 C
e Colobus_guereza.LG01                                      376350   0 - 200372422 C
e Colobus_angolensis.KN981557.1                             406473   0 -   2368649 C
e Chlorocebus_sabaeus.CM001947.1                            302019   0 - 135778131 C
e Chlorocebus_pygerythrus.k141_3063162                        7239   0 -     44032 C
e Chlorocebus_aethiops.ctg25                                340694   0 +  18827391 C
e Chiropotes_sagulatus.k141_1113111                           5818   0 +     34062 C
e Chiropotes_israelita.k141_313004                           40246   0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           1561   0 +      5346 C
e Cheracebus_torquatus.k141_890198                           17175   0 +     39636 C
e Cheracebus_regulus.k141_471822                             17391   0 +    216457 C
e Cheracebus_lugens.k141_1179667                             17127   0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             6714   0 -     32913 C
e Cheirogaleus_medius.k141_759766                             2852   0 -     15404 C
e Cheirogaleus_major.k141_666340                             28322   0 -     33796 C
e Cercopithecus_roloway.k141_3012935                         19797   0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           22872   0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         1353   0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       25200   0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        29380   0 -     45857 C
e Cercopithecus_mona.ctg39                                  267919   0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  362211   0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                            9612   0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          24903   0 -     34525 C
e Cercopithecus_diana.k141_132293                             9181   0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           4991   0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        25022   0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          41924   0 -    148725 C
e Cercocebus_lunulatus.k141_2779015                          41941   0 -     44860 C
e Cercocebus_chrysogaster.k141_1522556                       42108   0 +     47900 C
e Cercocebus_atys.KQ010504.1                                138368   0 -   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680   0 +     27315 C
e Cephalopachus_bancanus.k141_72622                           1235   0 -      1636 C
e Cebus_unicolor.k141_1654760                                64802   0 -     89041 C
e Cebus_olivaceus.k141_1404781                                5707   0 -     34880 C
e Cebus_albifrons.Contig27                                  368818   0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               40615   0 +     53515 C
e Cebuella_niveiventris.k141_592277                           2729   0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421   0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094   0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           268063   0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921   0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648   0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698   0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038   0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752   0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443   0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165451150   0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           16195   0 +     17162 C
e Callimico_goeldii.k141_1609886                              7497   0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         18339   0 +    119600 C
e Cacajao_hosomi.k141_81245                                  18426   0 +     95584 C
e Cacajao_calvus.k141_89051                                  40900   0 -     91139 C
e Cacajao_ayresi.k141_96119                                   5606   0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528583   0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559   0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420   0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852   0 +  48749331 C
e Bison_bison.KN261452.1                                     20465   0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932   0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970   0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762   0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889   0 -     19611 C
e Avahi_laniger.k141_2756659                                  3888   0 +     11645 C
e Ateles_paniscus.k141_866194                                20710   0 -     33135 C
e Ateles_marginatus.k141_970259                              46651   0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              31280   0 +     44353 C
e Ateles_chamek.k141_615173                                   3727   0 -     28759 C
e Ateles_belzebuth.k141_1572163                               8590   0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               272423   0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732   0 -     32367 C
e Aotus_vociferans.k141_944972                                6977   0 +      8415 C
e Aotus_trivirgatus.k141_192090                              21841   0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                670199   0 +   5030052 C
e Aotus_griseimembra.k141_982342                             42186   0 +     43593 C
e Aotus_azarae.k141_118258                                   48439   0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036   0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387   0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1583937   0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624   0 +     42133 C
e Alouatta_puruensis.k141_251022                              6485   0 +     30854 C
e Alouatta_palliata.k141_638677                              44360   0 +     70886 C
e Alouatta_nigerrima.k141_376068                             38662   0 +     45454 C
e Alouatta_macconnelli.k141_361275                           21679   0 -     24835 C
e Alouatta_juara.k141_1687208                                40033   0 -     64179 C
e Alouatta_discolor.k141_2561099                             41595   0 +     55831 C
e Alouatta_caraya.k141_1109140                               42145   0 -     78289 C
e Alouatta_belzebul.k141_1011583                             69916   0 -     84148 C
e Allochrocebus_lhoesti.k141_441277                          41129   0 +     44087 C
e Allenopithecus_nigroviridis.k141_3755588                   45208   0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    15727   0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962   9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313   0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       2750 53 +     36723 AGTCTTCTCCTTCACTGCCATAGAATGCAGTGGCTTCTGCAGATACACCTAAG
s Gorilla_beringei.k141_3358147                               3087 53 -      8343 agtcttctccttcactgccatagaattcagtggcttctgcagatacacctaag
i Gorilla_beringei.k141_3358147                          I 18 T 344
s Gorilla_gorilla.LT578341.1                                252098 53 - 186649187 AGTCTTCTCCTTCACTGCCATAGAATTCAGTGGCTTCTGCAGATACACCTAAG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Pan_troglodytes.CM009242.2                               1470105 53 - 189151597 agtcttctccttcactgccatagaattcagtggcttctgcagatacacctaag
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pongo_abelii.CM009266.2                                   175243 53 - 189387572 AGTCTTCTCCTTCACTGCCATAGAATTCTGTGGCTTCTGCAGATACAGCTAAG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190061 53 -   9816681 AGTCTTCTCCTTCACTGCCATAGAATTTGGTGGCTTCTGCAGATACAGCTAAG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991  0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     29661  0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_28053       37455  0 +     38305 C
e Octodon_degus.JH651603.1                                11044981  0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949  0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1924707  0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                  7606  0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254  0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    96011  0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   1279  0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627  0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       60200  0 -     66877 C
e Cavia_porcellus.DS562891.1                               4997099  0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4993657  0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    41667  4 +    145209 I
e Echinops_telfairi.JH980293.1                            62851351  4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              11056  4 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862408  0 -  20541912 C
e Pygathrix_nigripes_a.k141_215492                              5211  0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  150834  0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             24341  0 +     91421 C
e Callibella_humilis.k141_1233062                             7834  0 +     18648 C
e Perodicticus_potto.k141_1854441                            15139  0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          22769  0 +     31479 C
e Otolemur_garnettii.GL873799.1                             349529  0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        36515  0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929  0 - 199412804 C
e Nycticebus_coucang.k141_8166032                             2064  1 +      2758 I
e Nycticebus_bengalensis.LG01                             93632675  0 + 196305487 C
e Loris_tardigradus.ctg83                                  5041044  0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            7384  0 +     19643 C
e Galagoides_demidoff.k141_561628                            16986  0 -     32986 C
e Galago_senegalensis.k141_991736                             4930  0 +     22493 C
e Galago_moholi.ctg3793                                     121389  0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       17350  0 -     45910 C
e Allochrocebus_solatus.k141_3554717                         15445  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         13769  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17503  0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2107833  0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495  0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2743  0 +      5315 C
e Tupaia_tana.TupTan_flattened_line_394                       5859  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1831343  0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         26391  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102738  0 -    112863 C
e Ursus_maritimus.KK499267.1                                179344  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              4224  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2227  0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        37014  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1449171  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                195975  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11466383  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14352449  0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         5996  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23509  0 -     74585 C
e Lycaon_pictus.CM007581.1                                41612373  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        810986  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913636  0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45104799  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41613218  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          220083  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740  0 -     23171 C
e CanFam4.chr16                                           42503104  0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672  0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20412834  0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_230229                      1048  0 +      2695 C
e Xerus_inauris.XerIna_scaffold_2302                        171803  0 -    224448 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Varecia_variegata.k141_289850                              21738  0 -    147434 C
e Varecia_rubra.k141_787544                                  22831  0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   104988  0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58579  0 +     59866 C
e Trachypithecus_phayrei.ctg124                             252848  0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                         7609  0 -     13050 C
e Trachypithecus_melamera.k141_591572                          615  0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     7187  0 +     22490 C
e Trachypithecus_laotum.k141_928651                          25744  0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      27707  0 -     64340 C
e Trachypithecus_germaini.k141_57262                          6693  0 -     28527 C
e Trachypithecus_geei.k141_1001272                           25885  0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      25768  0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       17543  0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     30906  0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        18222  0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    477420  0 -    610378 C
e Theropithecus_gelada.CM009954.1                           350535  0 - 186847797 C
e Tarsius_wallacei.k141_226975                                4794  0 +     20590 C
e Tarsius_lariang.k141_1780720                                4755  0 +      6850 C
e Tapirus_terrestris.TapTer_scaffold_755                    103056  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      189100  0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 382  0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                11377  0 +     22964 C
e Symphalangus_syndactylus.tarseq_199                       388305  0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122274  0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1866045  0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1856078  0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    46000  0 +     77746 C
e Semnopithecus_vetulus.k141_244474                          26080  0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     23011  0 -     29113 C
e Semnopithecus_priam.k141_714795                            20331  0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12673  0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      26177  0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22658  0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113762  0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           5632  0 +     21866 C
e Sapajus_apella.ctg103                                     236042  0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Saguinus_oedipus.k141_1466288                               1954  0 -      4301 C
e Saguinus_mystax.k141_8077960                                1588  0 +      5979 C
e Saguinus_midas.LG03                                       388907  0 - 209938924 C
e Saguinus_labiatus.k141_1571581                              1785  0 -      2099 C
e Saguinus_inustus.k141_2469308                               1640  0 +      5932 C
e Saguinus_imperator.k141_1898058                             1586  0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             1567  0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1559  0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553  0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             233778  0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104119518  0 + 195417433 C
e Rhinopithecus_bieti.k119_221883                            26170  0 +     27361 C
e Rhinolophus_sinicus.LVEH01000134.1                       2911225  0 +   3329780 C
e Rattus_norvegicus.chr16                                 37011694 8457 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096575  0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3535136  0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5838570  0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            49602  0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            32349 1414 +     52041 I
e Propithecus_verreauxi.k141_1047036                          5969  0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       92332  0 -     98465 C
e Propithecus_perrieri.k141_1496898                          32061  0 +     46564 C
e Propithecus_edwardsi.k141_635656                            5736  0 -     30655 C
e Propithecus_diadema.k141_153680                             2000  0 -     11706 C
e Propithecus_coronatus.k141_209299                           1403  0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1563767  0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42145  0 -     80239 C
e Presbytis_comata.k141_1230337                              24950  0 +     69807 C
e Plecturocebus_moloch.k141_1031110                          41783  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          40315  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      12399  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          5463  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          40420  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          5466  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     40767  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       40374  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                           970  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        5885  0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           29454  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              554439  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           29470  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         29707  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               29431  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          3692  0 -     25401 C
e Pithecia_albicans.k141_1239476                             62596  0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              564  0 +     22231 C
e Piliocolobus_tephrosceles.PDMG02034973.1                    2453  0 +      5735 C
e Piliocolobus_kirkii.k141_579682                            44775  0 +     45295 C
e Piliocolobus_gordonorum.k141_905727                        62176  0 -     63152 C
e Piliocolobus_badius.k141_2495623                            6468  0 +      7560 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         244434  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589  0 +     78924 C
e Papio_ursinus.k141_2278143                                 19614  0 -     23640 C
e Papio_papio.k141_799093                                    12804  0 +     16796 C
e Papio_kindae.k141_2214839                                  19668  0 -     27687 C
e Papio_hamadryas.Contig39                                  288052  0 -  20919399 C
e Papio_cynocephalus.k141_1507553                             7013  0 +     21308 C
e Papio_anubis.CM001495.2                                   240549  0 - 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3969975  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18459255  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   21929  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   104789  0 +    107918 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    89957  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Nomascus_siki_a.k141_941534                                  23447  0 -     54323 C
e Nomascus_siki_b.tarseq_93                            8411333  0 -  22158432 C
e Nomascus_gabriellae.k141_57920                             13049  0 +     22201 C
e Nomascus_concolor.k141_735679                               7164  0 -     16345 C
e Nomascus_annamensis.k141_1771965                           51069  0 -    132029 C
e Noctilio_leporinus.NocLep_scaffold_7894                   125173  0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26317  0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264  0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380625  0 +   4330536 C
e Myotis_davidii.KB100139.1                                4384803  0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9790404  0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39486461 3210 + 130317789 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Mus_musculus.chr8                                       41679352 2706 + 129401213 I
e Mus_caroli.LT608237.1                                   35584971 6698 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          36388  0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   15863  0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176536  0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50085  0 -     62432 C
e Miopithecus_ogouensis.k141_1534655                         19736  0 -     27822 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182357  0 +    200668 C
e Microcebus_murinus.CM007674.1                           74982290  0 +  93316391 C
e Mico_schneideri.k141_1877700                                     16341  0 -     26561 C
e Mico_humeralifer.k141_1180625                               8390  0 -     12984 C
e Mico_argentatus.k141_582562                                 7606  0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 44855 1372 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148130  0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7498675  0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             218512  0 +    317179 C
e Manis_javanica.JSZB01003497.1                             671221  0 -    737560 C
e Mandrillus_sphinx.Contig270                               354541  0 -    752769 C
e Mandrillus_leucophaeus.scaffold280                        319709  0 +  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                220942  0 -    270270 C
e Macaca_tonkeana.k141_339739                                  209  0 +     17132 C
e Macaca_thibetana.k99_41370                                 19612  0 +     21031 C
e Macaca_silenus.Contig273                                  268431  0 +    668171 C
e Macaca_siberu.k141_2185972                                 42498  0 +     59329 C
e Macaca_radiata.k141_3557992                                22677  0 +     24253 C
e Macaca_nigra.k141_2818840                                  46022  0 -     62418 C
e Macaca_nemestrina.KQ007038.1                              396858  0 +  25927173 C
e Macaca_mulatta.NC_041758.1                                412635  0 - 187317192 C
e Macaca_maura.k141_1103459                                  43467  0 +     51645 C
e Macaca_leonina.k141_321385                                 33696  0 -     50087 C
e Macaca_fuscata.k119_546792                                 22506  0 +     30527 C
e Macaca_fascicularis.k141_1397292                           19657  0 -     24934 C
e Macaca_cyclopis.k119_263443                                22554  0 +     30207 C
e Macaca_assamensis.Contig5                                 370299  0 -  60120075 C
e Macaca_arctoides.k141_1757516                              42638  0 -     61512 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lophocebus_aterrimus.ctg367                               330321  0 -   1826925 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       6679  0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          6685  0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              6675  0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          6678  0 +     29618 C
e Leontopithecus_rosalia.k141_349454                          9242  0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     7861  0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        1228  0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           1597  0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        1646  0 -     13097 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59517  0 -     65777 C
e Lagothrix_lagothricha.k141_246028                          40966  0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1236885  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Indri_indri.k141_4600452                                    1394  0 -      1527 C
e Ictidomys_tridecemlineatus.JH393364.1                     384476  0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7798837  0 +  11177569 C
e Hylobates_pileatus_b.LG02                                       2049482 477 + 191637585 I
e Hylobates_klossii.k141_738755                              10363  0 +     55766 C
e Hylobates_agilis.k141_1155965                               3180  0 +     12352 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66590  0 +     83186 C
e Hoolock_leuconedys.ctg274                                    140145  0 -    630532 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47193  0 +     49977 C
e Hipposideros_armiger.JXIK01000431.1                      1547877  0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28109  0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               16737  0 +     18121 C
e Felis_nigripes.FelNig_flattened_line_31944                 25108  0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185113760 245 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Erythrocebus_patas.Contig38                               260217  0 +  21539334 C
e Equus_przewalskii.KK951119.1                              409840  0 -    498745 C
e Equus_caballus.CM000403.2                               21373054  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3039120  0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12576040  0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           10200  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          28236  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               3976  0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  136924  0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662139  0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        290271  0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    642549  0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1604  0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40006  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           427  0 -      8242 C
e Condylura_cristata.JH655891.1                           35804984  0 +  53390261 C
e Colobus_polykomos.k141_1559707                              6362  0 -      6605 C
e Colobus_guereza.LG01                                      376350  0 - 200372422 C
e Colobus_angolensis.KN981557.1                             406473  0 -   2368649 C
e Chlorocebus_sabaeus.CM001947.1                            302019  0 - 135778131 C
e Chlorocebus_pygerythrus.k141_3063162                        7239  0 -     44032 C
e Chlorocebus_aethiops.ctg25                                340694  0 +  18827391 C
e Chiropotes_sagulatus.k141_1113111                           5818  0 +     34062 C
e Chiropotes_israelita.k141_313004                           40246  0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           1561  0 +      5346 C
e Cheracebus_torquatus.k141_890198                           17175  0 +     39636 C
e Cheracebus_regulus.k141_471822                             17391  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             17127  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             6714  0 -     32913 C
e Cheirogaleus_medius.k141_759766                             2852  0 -     15404 C
e Cheirogaleus_major.k141_666340                             28322  0 -     33796 C
e Cercopithecus_roloway.k141_3012935                         19797  0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           22872  0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         1353  0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       25200  0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        29380  0 -     45857 C
e Cercopithecus_mona.ctg39                                  267919  0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  362211  0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                            9612  0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          24903  0 -     34525 C
e Cercopithecus_diana.k141_132293                             9181  0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           4991  0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        25022  0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          41924  0 -    148725 C
e Cercocebus_lunulatus.k141_2779015                          41941  0 -     44860 C
e Cercocebus_chrysogaster.k141_1522556                       42108  0 +     47900 C
e Cercocebus_atys.KQ010504.1                                138368  0 -   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680  0 +     27315 C
e Cephalopachus_bancanus.k141_72622                           1235  0 -      1636 C
e Cebus_unicolor.k141_1654760                                64802  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                5707  0 -     34880 C
e Cebus_albifrons.Contig27                                  368818  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               40615  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           2729  0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20094  0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           268063  0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17443  0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165451150  0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           16195  0 +     17162 C
e Callimico_goeldii.k141_1609886                              7497  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         18339  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  18426  0 +     95584 C
e Cacajao_calvus.k141_89051                                  40900  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   5606  0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               3889  0 -     19611 C
e Avahi_laniger.k141_2756659                                  3888  0 +     11645 C
e Ateles_paniscus.k141_866194                                20710  0 -     33135 C
e Ateles_marginatus.k141_970259                              46651  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              31280  0 +     44353 C
e Ateles_chamek.k141_615173                                   3727  0 -     28759 C
e Ateles_belzebuth.k141_1572163                               8590  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               272423  0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      13732  0 -     32367 C
e Aotus_vociferans.k141_944972                                6977  0 +      8415 C
e Aotus_trivirgatus.k141_192090                              21841  0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                670199  0 +   5030052 C
e Aotus_griseimembra.k141_982342                             42186  0 +     43593 C
e Aotus_azarae.k141_118258                                   48439  0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174387  0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Alouatta_seniculus.k141_928287                             30624  0 +     42133 C
e Alouatta_puruensis.k141_251022                              6485  0 +     30854 C
e Alouatta_palliata.k141_638677                              44360  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             38662  0 +     45454 C
e Alouatta_macconnelli.k141_361275                           21679  0 -     24835 C
e Alouatta_juara.k141_1687208                                40033  0 -     64179 C
e Alouatta_discolor.k141_2561099                             41595  0 +     55831 C
e Alouatta_caraya.k141_1109140                               42145  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             69916  0 -     84148 C
e Allochrocebus_lhoesti.k141_441277                          41129  0 +     44087 C
e Allenopithecus_nigroviridis.k141_3755588                   45208  0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    15727  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810313  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       2803 1 +     36723 T
s Acinonyx_jubatus.LLWD01001279.1                           810313 1 +   1699592 t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412834 1 +  29979442 t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 3
s Allactaga_bullata.AllBul_scaffold_20030                    15727 1 -     61208 T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45208 1 +     53615 t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41129 1 +     44087 C
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13769 1 -     21945 C
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15445 1 +     32033 C
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69916 1 -     84148 T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42145 1 -     78289 T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41595 1 +     55831 T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40033 1 -     64179 T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21679 1 -     24835 T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38662 1 +     45454 T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44360 1 +     70886 T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6485 1 +     30854 T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30624 1 +     42133 T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174387 1 -    412891 t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Aotus_azarae.k141_118258                                   48439 1 -     65372 T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42186 1 +     43593 T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670199 1 +   5030052 T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21841 1 -     23494 T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                6977 1 +      8415 T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13732 1 -     32367 t
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       17350 1 -     45910 T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2672 1 -     15198 t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 3
s Ateles_geoffroyi_b.tarseq_1536                               272423 1 +  21539123 T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8590 1 +     48076 T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3727 1 -     28759 T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31280 1 +     44353 T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46651 1 -     71267 T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20710 1 -     33135 T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3888 1 +     11645 t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3889 1 -     19611 t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5606 1 +     28062 T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40900 1 -     91139 T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18426 1 +     95584 T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18339 1 +    119600 T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7834 1 +     18648 T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7497 1 -     13885 T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16195 1 +     17162 T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451150 1 + 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17443 1 -     18408 T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503104 1 +  60362399 a
i CanFam4.chr16                                          C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6740 1 -     23171 a
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 3
s Canis_lupus_dingo.QKWQ01000480.1                          220083 1 +   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 3
s Canis_lupus_familiaris.chr16                            41613218 1 +  59632846 a
i Canis_lupus_familiaris.chr16                           C 0 I 3
s Canis_lupus_orion.HG994398.1                            45104799 1 -  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 I 3
s Carlito_syrichta.NW_007259797.1                           268063 1 +    496798 A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2743 1 +      5315 t
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 3
s Castor_canadensis.CasCan_scaffold_39952                    20094 1 -     39886 t
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993657 1 +  23392119 T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997099 1 +  23407841 t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60200 1 -     66877 T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2729 1 -     12580 T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40615 1 +     53515 T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368818 1 -  26074798 T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5707 1 -     34880 T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64802 1 -     89041 T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1235 1 -      1636 A
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489847 1 -  27778364 c
i Ceratotherium_simum.JH767749.1                         C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16680 1 +     27315 c
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 3
s Cercocebus_atys.KQ010504.1                                138368 1 -   4669795 C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42108 1 +     47900 C
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41941 1 -     44860 C
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41924 1 -    148725 C
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25022 1 -     40656 C
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4991 1 +     20796 C
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9181 1 -     17524 C
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24903 1 -     34525 C
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9612 1 -     25376 C
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362211 1 -  39242232 C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267919 1 +  21565898 C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29380 1 -     45857 C
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25200 1 -     32606 C
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1353 1 +      8499 C
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22872 1 +     70610 C
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19797 1 +     36323 C
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10495 1 -     19938 t
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 3
s Cheirogaleus_major.k141_666340                             28322 1 -     33796 T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2852 1 -     15404 t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6714 1 -     32913 T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17127 1 -     40346 T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17391 1 +    216457 T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17175 1 +     39636 T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1561 1 +      5346 T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40246 1 -    112038 T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5818 1 +     34062 T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340694 1 +  18827391 C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7239 1 -     44032 T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302019 1 - 135778131 C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406473 1 -   2368649 T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376350 1 - 200372422 t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              6362 1 -      6605 T
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804984 1 +  53390261 t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           427 1 -      8242 t
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 3
s Cricetomys_gambianus.CriGam_scaffold_14425                 40006 1 -     83289 T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1604 1 +     87169 g
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 3
s Ctenodactylus_gundi.CteGun_scaffold_65                    642549 1 -   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2627 1 +     50838 T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1279 1 +     36344 T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2107833 1 -   2246927 t
i Dasypus_novemcinctus.JH564415.1                        C 0 I 3
s Daubentonia_madagascariensis.ctg71                        290271 1 +  12879189 t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862408 1 -  20541912 t
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662139 1 -   1390856 c
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                  136924 1 -    198055 c
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 3
s Dinomys_branickii.DinBra_scaffold_10381                    96011 1 -    115145 C
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7606 1 +     14636 T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851355 1 - 111700974 a
i Echinops_telfairi.JH980293.1                           I 4 C 0
s Eidolon_helvum.AWHC01266696.1                               3976 1 +     19438 c
i Eidolon_helvum.AWHC01266696.1                          C 0 I 3
s Ellobius_lutescens.LOEQ01008920.1                          28236 1 +    110024 T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10200 1 +     18970 T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913636 1 +  41312741 t
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Eptesicus_fuscus.JH977646.1                             12576040 1 +  14770903 t
i Eptesicus_fuscus.JH977646.1                            C 0 I 3
s Equus_asinus.JREZ01000139.1                              3039120 1 -   4378816 c
i Equus_asinus.JREZ01000139.1                            C 0 I 3
s Equus_caballus.CM000403.2                               21373054 1 +  39960074 c
i Equus_caballus.CM000403.2                              C 0 I 3
s Equus_przewalskii.KK951119.1                              409840 1 -    498745 c
i Equus_przewalskii.KK951119.1                           C 0 I 3
s Erythrocebus_patas.Contig38                               260217 1 +  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186244219 1 - 206538554 c
i Felis_catus.CM001381.2                                 I 241 I 3
s Felis_catus_fca126.CM031415.1                          185114005 1 - 205367284 c
i Felis_catus_fca126.CM031415.1                          I 245 I 3
s Felis_nigripes.FelNig_flattened_line_31944                 25108 1 -     30238 c
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 3
s Galago_moholi.ctg3793                                     121389 1 -    137831 T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4930 1 +     22493 T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16986 1 -     32986 T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16737 1 +     18121 t
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               2796 1 -      8343 t
i Gorilla_beringei.k141_3358147                          T 344 I 344
s Gorilla_gorilla.LT578341.1                                252151 1 - 186649187 T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28109 1 -    327341 G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 3
s Heterocephalus_glaber.JH602082.1                         1924707 1 -  22651954 t
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547877 1 -   1711038 t
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_23202               47193 1 +     49977 t
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 3
s Hoolock_leuconedys.ctg274                                    140145 1 -    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66590 1 +     83186 C
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 3
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68949 1 +    143317 T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3180 1 +     12352 t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10363 1 +     55766 t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2049959 1 + 191637585 t
i Hylobates_pileatus_b.LG02                                     I 477 C 0
s Hylobates_pileatus_a.tarseq_633                            7798837 1 +  11177569 T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384476 1 +   7955117 T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                    1394 1 -      1527 T
i Indri_indri.k141_4600452                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1236885 1 +   9596543 T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40966 1 +    110728 T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59517 1 -     65777 t
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 3
s Leontocebus_fuscicollis.k141_2994775                        1646 1 -     13097 T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1597 1 +      5940 T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1228 1 -      5717 T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7861 1 -     11567 T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9242 1 -     12945 T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6678 1 +     29618 T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6675 1 +     31569 T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6685 1 +     24756 t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6679 1 +     16388 T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810986 1 -   3914936 c
i Leptonychotes_weddellii.KB714746.1                     C 0 I 3
s Lophocebus_aterrimus.ctg367                               330321 1 -   1826925 C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7384 1 +     19643 T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041044 1 -   6120653 T
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612373 1 +  59628241 a
i Lycaon_pictus.CM007581.1                               C 0 I 3
s Macaca_arctoides.k141_1757516                              42638 1 -     61512 C
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370299 1 -  60120075 C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22554 1 +     30207 C
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19657 1 -     24934 C
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22506 1 +     30527 C
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33696 1 -     50087 C
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43467 1 +     51645 C
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412635 1 - 187317192 C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396858 1 +  25927173 C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46022 1 -     62418 C
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22677 1 +     24253 C
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42498 1 +     59329 C
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268431 1 +    668171 C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19612 1 +     21031 C
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  209 1 +     17132 C
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220942 1 -    270270 c
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 3
s Mandrillus_leucophaeus.scaffold280                        319709 1 +  24302211 C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354541 1 -    752769 T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671221 1 -    737560 t
i Manis_javanica.JSZB01003497.1                          C 0 I 3
s Manis_pentadactyla.KN006162.1                             218512 1 +    317179 t
i Manis_pentadactyla.KN006162.1                          C 0 I 3
s Marmota_marmota.CZRN01000018.1                           7498675 1 +  40650429 t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148130 1 +    207569 t
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_19308             23509 1 -     74585 t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 4
s Meriones_unguiculatus.MerUng_scaffold_7390                 46227 1 -    140813 T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1372 I 110
s Mico_argentatus.k141_582562                                 7606 1 +     17804 T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8390 1 -     12984 T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16341 1 -     26561 T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982290 1 +  93316391 T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41671 1 +    145209 G
i Microgale_talazaci.MicTal_scaffold_6613                I 4 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182357 1 +    200668 t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 3
s Miopithecus_ogouensis.k141_1534655                         19736 1 -     27822 T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         5996 1 +     27589 c
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 3
s Mirza_zaza.k141_766280                                     50085 1 -     62432 t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176536 1 +    366855 t
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Mungos_mungo.MunMun_flattened_line_18455                   15863 1 -     63510 G
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 3
s Murina_feae.MurFea_scaffold_17764                          36388 1 +     47283 t
i Murina_feae.MurFea_scaffold_17764                      C 0 I 3
s Mus_caroli.FMAL02030609.1                                    104 1 +      5579 t
i Mus_caroli.FMAL02030609.1                              n 6698 C 0
s Mus_musculus.chr8                                       41682058 1 + 129401213 t
i Mus_musculus.chr8                                      I 2706 C 0
s Mus_spretus.CM004101.1                                  39489671 1 + 130317789 t
i Mus_spretus.CM004101.1                                 I 3210 C 0
s Mustela_putorius.JH418006.1                             14352449 1 +  14710649 t
i Mustela_putorius.JH418006.1                            C 0 I 3
s Myotis_brandtii.KE162005.1                               9790404 1 +  10118263 t
i Myotis_brandtii.KE162005.1                             C 0 I 3
s Myotis_davidii.KB100139.1                                4384803 1 +   6019432 t
i Myotis_davidii.KB100139.1                              C 0 I 3
s Myotis_lucifugus.GL429869.1                               380625 1 +   4330536 t
i Myotis_lucifugus.GL429869.1                            C 0 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117264 1 +    130748 t
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 3
s Nasalis_larvatus.k141_1350636                              26317 1 +     34575 T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466383 1 -  31847680 c
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_7894                   125173 1 -    149072 t
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 3
s Nomascus_annamensis.k141_1771965                           51069 1 -    132029 T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7164 1 -     16345 T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13049 1 +     22201 T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411333 1 -  22158432 T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23447 1 -     54323 T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195975 1 +   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 3
s Nycticebus_bengalensis.LG01                             93632675 1 + 196305487 T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              296 1 -      3937 t
i Nycticebus_coucang.k141_3846325                        I 54 I 68
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560929 1 - 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11044981 1 -  11899542 t
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449171 1 +   2017862 c
i Odobenus_rosmarus.KB229312.1                           C 0 I 3
s Ondatra_zibethicus.OndZib_scaffold_7387                    89957 1 -    140218 T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104789 1 +    107918 T
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11060 1 -     14239 t
i Orycteropus_afer.OryAfe_flattened_line_171931          I 4 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37014 1 +    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 3
s Otolemur_crassicaudatus.k141_649260                        36515 1 -     51505 T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             349529 1 +   1103335 T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470158 1 - 189151597 t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21929 1 -    230217 t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 3
s Panthera_pardus.KV860321.1                              18459255 1 -  18783137 c
i Panthera_pardus.KV860321.1                             C 0 I 3
s Panthera_tigris.KE722367.1                               3969975 1 +   8748460 c
i Panthera_tigris.KE722367.1                             C 0 I 3
s Papio_anubis.CM001495.2                                   240549 1 - 183742232 C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7013 1 +     21308 C
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288052 1 -  20919399 C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19668 1 -     27687 C
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12804 1 +     16796 C
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19614 1 -     23640 C
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12589 1 +     78924 c
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 3
s Perodicticus_ibeanus.k141_1921260                          22769 1 +     31479 T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            15139 1 -     24908 T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244434 1 +  18517816 T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29661 1 -     56120 T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6468 1 +      7560 T
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62176 1 -     63152 T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44775 1 +     45295 T
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2453 1 +      5735 T
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              564 1 +     22231 t
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 3
s Pithecia_albicans.k141_1239476                             62596 1 +    207309 T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3692 1 -     25401 T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29431 1 +     58159 T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29707 1 +     63561 T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29470 1 +     51148 T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554439 1 -   4542175 T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29454 1 +     51125 T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5885 1 +     39866 T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                           970 1 -      9282 T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40374 1 -     87950 T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40767 1 -     88961 T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5466 1 -     39403 T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40420 1 +     87928 T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5463 1 -     60166 T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12399 1 -     67232 T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40315 1 -     90634 T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41783 1 +     89403 T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175296 1 - 189387572 T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190114 1 -   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24950 1 +     69807 T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42145 1 -     80239 t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563767 1 -   2598838 G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1403 1 -      7103 t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2000 1 -     11706 t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5736 1 -     30655 t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32061 1 +     46564 t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92332 1 -     98465 t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5969 1 +     35169 t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            33763 1 +     52041 T
i Psammomys_obesus.NESX01036366.1                        I 1414 I 110
s Pteronotus_parnellii.KE847780.1                            49602 1 -     66298 t
i Pteronotus_parnellii.KE847780.1                        C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2227 1 -     18639 t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 3
s Pteropus_alecto.KB030862.1                               5838570 1 -  28871421 c
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Pteropus_vampyrus.KN525825.1                             3535136 1 -   4952924 c
i Pteropus_vampyrus.KN525825.1                           C 0 I 3
s Puma_concolor.QAVW01001104.1                            18096575 1 +  38429054 c
i Puma_concolor.QAVW01001104.1                           C 0 I 3
s Pygathrix_cinerea.k141_1153803                             24341 1 +     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150834 1 -   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5211 1 +     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020151 1 -  90668790 T
i Rattus_norvegicus.chr16                                I 8457 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911225 1 +   3329780 t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 3
s Rhinopithecus_bieti.k119_221883                            26170 1 +     27361 t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119518 1 + 195417433 T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233778 1 -   7961872 t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72553 1 -    116970 c
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 3
s Saguinus_bicolor.k141_1429097                               1559 1 +     27962 T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1567 1 +      6077 T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1586 1 +      5971 T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1640 1 +      5932 T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1785 1 -      2099 T
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388907 1 - 209938924 T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1588 1 +      5979 T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               1954 1 -      4301 T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236042 1 +   5703754 T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5632 1 +     21866 T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113762 1 +    313613 t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22658 1 +     27374 T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26177 1 +     58920 T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12673 1 -     45317 T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20331 1 -     42441 C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23011 1 -     29113 T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26080 1 -     48123 T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46000 1 +     77746 T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856078 1 -   1910179 t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866045 1 +   3870691 T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4224 1 -     97271 t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_6629             122274 1 +    196729 G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 3
s Symphalangus_syndactylus.tarseq_199                       388305 1 +   1523678 T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11377 1 +     22964 t
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 3
s Tamandua_tetradactyla.TamTet_scaffold_224794                 382 1 +      5583 t
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 3
s Tapirus_indicus.TapInd_scaffold_7432                      189100 1 +    199430 t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    103056 1 -    539355 t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 3
s Tarsius_lariang.k141_1780720                                4755 1 +      6850 A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4794 1 +     20590 A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350535 1 - 186847797 T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              21991 1 -     33621 T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17503 1 -     31044 t
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 3
s Tonatia_saurophila.TonSau_scaffold_294                    477420 1 -    610378 c
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_1189070                        18222 1 +     26378 T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30906 1 -     78344 T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17543 1 +     25722 T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25768 1 -     62838 T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25885 1 +     46913 T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6693 1 -     28527 T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27707 1 -     64340 T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25744 1 -     63452 T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7187 1 +     22490 T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          615 1 -      6147 T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7609 1 -     13050 t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252848 1 -   6242583 t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58579 1 +     59866 T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831343 1 -   4065304 t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5859 1 -     70247 t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104988 1 -    105689 t
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179344 1 +   5085361 t
i Ursus_maritimus.KK499267.1                             C 0 I 3
s Varecia_rubra.k141_787544                                  22831 1 -     30710 G
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21738 1 -    147434 g
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102738 1 -    112863 a
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 3
s Xerus_inauris.XerIna_scaffold_2302                        171803 1 -    224448 t
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26391 1 -     86975 c
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_230229                      1048 1 +      2695 T
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_28053       37455 0 +     38305 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254 0 -  37912305 C
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2804  9 +     36723 CAT---CG------G-CTC
s Acinonyx_jubatus.LLWD01001279.1                           810317  7 +   1699592 t------t------gattc
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412838  7 +  29979442 t------t------gattt
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15728 10 -     61208 AGT---GG------GATTC
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45209 10 +     53615 ggt---gg------ggctt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41130 10 +     44087 GGT---GG------GGCTC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13770 10 -     21945 GGT---GG------GGCTC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15446 10 +     32033 GGT---GG------GGCTC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69917  9 -     84148 GTG---GG------G-CTC
i Alouatta_belzebul.k141_1011583                         C 0 I 14
s Alouatta_caraya.k141_1109140                               42146  9 -     78289 GTG---GG------G-CTC
i Alouatta_caraya.k141_1109140                           C 0 I 14
s Alouatta_discolor.k141_2561099                             41596  9 +     55831 GTG---GG------G-CTC
i Alouatta_discolor.k141_2561099                         C 0 I 14
s Alouatta_juara.k141_1687208                                40034  9 -     64179 GTG---GG------G-CTC
i Alouatta_juara.k141_1687208                            C 0 I 14
s Alouatta_macconnelli.k141_361275                           21680  9 -     24835 GTG---GG------G-CTC
i Alouatta_macconnelli.k141_361275                       C 0 I 14
s Alouatta_nigerrima.k141_376068                             38663  9 +     45454 GTG---GG------G-CTC
i Alouatta_nigerrima.k141_376068                         C 0 I 14
s Alouatta_palliata.k141_638677                              44361  9 +     70886 GTG---GG------G-CTC
i Alouatta_palliata.k141_638677                          C 0 I 14
s Alouatta_puruensis.k141_251022                              6486  9 +     30854 GTG---GG------G-CTC
i Alouatta_puruensis.k141_251022                         C 0 I 14
s Alouatta_seniculus.k141_928287                             30625  9 +     42133 GTG---GG------G-CTC
i Alouatta_seniculus.k141_928287                         C 0 I 14
s Anoura_caudifer.AnoCau_scaffold_1412                      174391  7 -    412891 g------t------gattt
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Aotus_azarae.k141_118258                                   48440  9 -     65372 GTG---GG------G-CTC
i Aotus_azarae.k141_118258                               C 0 I 14
s Aotus_griseimembra.k141_982342                             42187  9 +     43593 GTG---GG------G-CTC
i Aotus_griseimembra.k141_982342                         C 0 I 14
s Aotus_nancymaae.KZ198451.1                                670200  9 +   5030052 GTG---GG------G-CTC
i Aotus_nancymaae.KZ198451.1                             C 0 I 14
s Aotus_trivirgatus.k141_192090                              21842  9 -     23494 GTG---GG------G-CTC
i Aotus_trivirgatus.k141_192090                          C 0 I 14
s Aotus_vociferans.k141_944972                                6978  9 +      8415 GTG---GG------G-CTC
i Aotus_vociferans.k141_944972                           C 0 I 14
s Aplodontia_rufa.AprRuf_scaffold_46868                      13733 10 -     32367 ggt---gg------gattc
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       17351  9 -     45910 GGT---GG------G-GTA
i Arctocebus_calabarensis.k141_1364444                   C 0 I 571
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2676  7 -     15198 g------t------gattt
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 3 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272424  9 +  21539123 GTG---AG------G-CTC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 14
s Ateles_belzebuth.k141_1572163                               8591  9 +     48076 GTG---AG------G-CTC
i Ateles_belzebuth.k141_1572163                          C 0 I 14
s Ateles_chamek.k141_615173                                   3728  9 -     28759 GTG---AG------G-CTC
i Ateles_chamek.k141_615173                              C 0 I 14
s Ateles_geoffroyi_a.k141_1283730                              31281  9 +     44353 GTG---AG------G-CTC
i Ateles_geoffroyi_a.k141_1283730                          C 0 I 14
s Ateles_marginatus.k141_970259                              46652  9 -     71267 GTG---AG------G-CTC
i Ateles_marginatus.k141_970259                          C 0 I 14
s Ateles_paniscus.k141_866194                                20711  9 -     33135 GTG---AG------G-CTC
i Ateles_paniscus.k141_866194                            C 0 I 14
s Avahi_laniger.k141_2756659                                  3889 10 +     11645 ggt---gg------gattc
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3890 10 -     19611 ggt---gg------gattc
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5607 10 +     28062 GGT---GG-----GG-CTC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40901 10 -     91139 GGT---GG-----GG-CTC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18427 10 +     95584 GGT---GG-----GG-CTC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18340 10 +    119600 GGT---GG-----GG-CTC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7835  9 +     18648 GTG---GG------G-CTC
i Callibella_humilis.k141_1233062                        C 0 I 14
s Callimico_goeldii.k141_1609886                              7498  9 -     13885 GTG---GG------G-CTC
i Callimico_goeldii.k141_1609886                         C 0 I 14
s Callithrix_geoffroyi.k119_473390                           16196  9 +     17162 GTG---GG------G-CTC
i Callithrix_geoffroyi.k119_473390                       C 0 I 14
s Callithrix_jacchus.pat_scaffold_3                      165451151  9 + 189096842 GTG---GG------G-CTC
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 14
s Callithrix_kuhlii.k119_404482                              17444  9 -     18408 GTG---GG------G-CTC
i Callithrix_kuhlii.k119_404482                          C 0 I 14
s CanFam4.chr16                                           42503108  7 +  60362399 t------t------gtttc
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6744  7 -     23171 t------t------gtttc
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220087  7 +   9314153 t------t------gtttc
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            41613222  7 +  59632846 t------t------gtttc
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            45104803  7 -  63665305 t------t------gtttc
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Carlito_syrichta.NW_007259797.1                           268064  8 +    496798 GTT---GT------A-CT-
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2747  7 +      5315 g------t------ggttt
i Carollia_perspicillata.CarPer_scaffold_170178          I 3 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20095 11 -     39886 ggt--ggg------gattc
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993658 10 +  23392119 GGT---AG------GATNN
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997100 10 +  23407841 ggt---ag------gattt
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60201 10 -     66877 GGT---AG------GATTT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2730  9 -     12580 GTG---GG------G-CTC
i Cebuella_niveiventris.k141_592277                      C 0 I 14
s Cebuella_pygmaea.k141_145798                               40616  9 +     53515 GTG---GG------G-CTC
i Cebuella_pygmaea.k141_145798                           C 0 I 14
s Cebus_albifrons.Contig27                                  368819  9 -  26074798 GTG---GG------G-CTC
i Cebus_albifrons.Contig27                               C 0 I 14
s Cebus_olivaceus.k141_1404781                                5708  9 -     34880 GTG---GG------G-CTC
i Cebus_olivaceus.k141_1404781                           C 0 I 14
s Cebus_unicolor.k141_1654760                                64803  9 -     89041 GTG---GG------G-CTC
i Cebus_unicolor.k141_1654760                            C 0 I 14
s Cephalopachus_bancanus.k141_72622                           1236  8 -      1636 GTT---GT------A-CT-
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489851  7 -  27778364 g------t------gattc
i Ceratotherium_simum.JH767749.1                         I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16684  7 +     27315 g------t------gattc
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 3 C 0
s Cercocebus_atys.KQ010504.1                                138369 10 -   4669795 GGT---GG------GGCTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42109 10 +     47900 GGT---GG------GGCTC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41942 10 -     44860 GGT---GG------GGCTC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41925 10 -    148725 GGT---GG------GGCTC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25023 10 -     40656 GGT---GG------GGCTC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           4992 10 +     20796 GGT---GG------GGCTC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9182 10 -     17524 GGT---GG------GGCTC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24904 10 -     34525 GGT---GG------GGCTC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9613 10 -     25376 GGT---GG------GGCTC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362212 10 -  39242232 GGT---GG------GGCTC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267920 10 +  21565898 GGT---GG------GGCTC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29381 10 -     45857 GGT---GG------GGCTC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25201 10 -     32606 GGT---GG------GGCTC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1354 10 +      8499 GGT---GG------GGCTC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22873 10 +     70610 GGT---GG------GGCTC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19798 10 +     36323 GGT---GG------GGCTC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10499  7 -     19938 g------t------gattc
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 3 C 0
s Cheirogaleus_major.k141_666340                             28323 10 -     33796 GGT---AG------GATTC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2853 10 -     15404 ggt---gg------gattc
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6715 10 -     32913 GGG---GG-----GG-CTC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17128 10 -     40346 GGG---GG-----GG-CTC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17392 10 +    216457 GGG---GG-----GG-CTC
i Cheracebus_regulus.k141_471822                         C 0 I 10
s Cheracebus_torquatus.k141_890198                           17176 10 +     39636 GGG---GG-----GG-CTC
i Cheracebus_torquatus.k141_890198                       C 0 I 18
s Chiropotes_albinasus.k141_1946120                           1562  9 +      5346 G-T---GG-----GG-CTC
i Chiropotes_albinasus.k141_1946120                      C 0 I 16
s Chiropotes_israelita.k141_313004                           40247 10 -    112038 GGT---GG-----GG-CTC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5819 10 +     34062 GGT---GG-----GG-CTC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340695 10 +  18827391 GGT---GG------GGCTC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7240 10 -     44032 GGT---GG------GGCTC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302020 10 - 135778131 GGT---GG------GGCTC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406474 10 -   2368649 GGT---GG------GGCTC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376351 10 - 200372422 ggt---gg------ggctc
i Colobus_guereza.LG01                                   C 0 T 699
s Colobus_polykomos.k141_1559707                              6363 10 -      6605 GGT---GG------GGCTC
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804985 10 +  53390261 g--ttg-t------gcttc
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           431  7 -      8242 a------g------gatgt
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 3 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40007 10 -     83289 GTT---GG------TATCC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 14
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1608  7 +     87169 t------t------gatgt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642550 10 -   1526836 ACC---AG------GATTC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2628 10 +     50838 GGT---AG------GACTT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1280 10 +     36344 GGT---AG------GGTTT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2107837  7 -   2246927 g------t------gattc
i Dasypus_novemcinctus.JH564415.1                        I 3 C 0
s Daubentonia_madagascariensis.ctg71                        290272 10 +  12879189 ggt---gg------gagtc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862412  7 -  20541912 g------t------gattt
i Desmodus_rotundus.KZ672289.1                           I 3 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662143  7 -   1390856 g------t------gattc
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136928  7 -    198055 g------t------gattc
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96012 10 -    115145 GGC---AG------GATTT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7607 10 +     14636 GGT---AG------GATTT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851356  7 - 111700974 a------t------gcttc
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               3980  7 +     19438 a------t------gattc
i Eidolon_helvum.AWHC01266696.1                          I 3 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28237 10 +    110024 GTT---AG------GATTC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10201 10 +     18970 GTT---GG------GATTC
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 19
s Enhydra_lutris.KZ291758.1                               24913640  7 +  41312741 t------t------gattc
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                             12576044  7 +  14770903 g------t------gattc
i Eptesicus_fuscus.JH977646.1                            I 3 C 0
s Equus_asinus.JREZ01000139.1                              3039124  7 -   4378816 g------t------tattc
i Equus_asinus.JREZ01000139.1                            I 3 C 0
s Equus_caballus.CM000403.2                               21373058  7 +  39960074 g------t------tattc
i Equus_caballus.CM000403.2                              I 3 C 0
s Equus_przewalskii.KK951119.1                              409844  7 -    498745 g------t------tattc
i Equus_przewalskii.KK951119.1                           I 3 C 0
s Erythrocebus_patas.Contig38                               260218 10 +  21539334 GGT---GG------GGCTC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186244223  7 - 206538554 t------t------gattc
i Felis_catus.CM001381.2                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                          185114009  7 - 205367284 t------t------gattc
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25112  7 -     30238 t------t------gattc
i Felis_nigripes.FelNig_flattened_line_31944             I 3 C 0
s Galago_moholi.ctg3793                                     121390  9 -    137831 GGT---GA------G-GTA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4931  9 +     22493 GGT---GA------G-GTA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16987  9 -     32986 GGT---GG------G-GTA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16738 10 +     18121 ggt---gg------gattc
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 48
s Gorilla_beringei.k141_3358147                               3141  9 -      8343 cAT---CG------G-CTC
i Gorilla_beringei.k141_3358147                          I 344 I 51
s Gorilla_gorilla.LT578341.1                                252152  9 - 186649187 CAT---CG------G-CTC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28113  7 -    327341 T------C------GATGC
i Helogale_parvula.HelPar_flattened_line_2585            I 3 C 0
s Heterocephalus_glaber.JH602082.1                         1924708 10 -  22651954 ggt---ag------gattg
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547881  7 -   1711038 g------t------gattc
i Hipposideros_armiger.JXIK01000431.1                    I 3 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47197  7 +     49977 g------t------gattc
i Hipposideros_galeritus.HipGal_scaffold_23202           I 3 C 0
s Hoolock_leuconedys.ctg274                                    140146  9 -    630532 GGT---TC------G-CTT
i Hoolock_leuconedys.ctg274                                 C 0 I 14
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66594  7 +     83186 T------T------GAGGC
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 3 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68950 10 +    143317 GGT---AA------GATTT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3181  9 +     12352 GGT---TC------A-CTT
i Hylobates_agilis.k141_1155965                          C 0 I 14
s Hylobates_klossii.k141_738755                              10364  9 +     55766 GGT---TC------A-CTT
i Hylobates_klossii.k141_738755                          C 0 I 14
s Hylobates_pileatus_b.LG02                                       2049960  9 + 191637585 GGT---TC------G-CTT
i Hylobates_pileatus_b.LG02                                     C 0 I 14
s Hylobates_pileatus_a.tarseq_633                            7798838  9 +  11177569 GGT---TC------G-CTT
i Hylobates_pileatus_a.tarseq_633                          C 0 I 14
s Ictidomys_tridecemlineatus.JH393364.1                     384477 10 +   7955117 AGT---GG------GATTC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                    1395 10 -      1527 GGT---GG------GATTC
i Indri_indri.k141_4600452                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1236886 10 +   9596543 AGT---GG------GATTC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40967  9 +    110728 GTG---GG------G-CTC
i Lagothrix_lagothricha.k141_246028                      C 0 I 14
s Lasiurus_borealis.LasBor_scaffold_16567                    59521  7 -     65777 g------t------gattc
i Lasiurus_borealis.LasBor_scaffold_16567                I 3 C 0
s Leontocebus_fuscicollis.k141_2994775                        1647  9 -     13097 GTG---GG------G-CTC
i Leontocebus_fuscicollis.k141_2994775                   C 0 I 14
s Leontocebus_illigeri.k141_2951200                           1598  9 +      5940 GTG---CG------G-CTC
i Leontocebus_illigeri.k141_2951200                      C 0 I 14
s Leontocebus_nigricollis.k141_3905062                        1229  9 -      5717 GTG---GG------G-CTC
i Leontocebus_nigricollis.k141_3905062                   C 0 I 14
s Leontopithecus_chrysomelas.k141_1327670                     7862  9 -     11567 GTG---GG------G-CTC
i Leontopithecus_chrysomelas.k141_1327670                C 0 I 14
s Leontopithecus_rosalia.k141_349454                          9243  9 -     12945 GTG---GG------G-CTC
i Leontopithecus_rosalia.k141_349454                     C 0 I 14
s Lepilemur_ankaranensis.k141_567626                          6679 10 +     29618 GAT---GA------GATTC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6676 10 +     31569 GAT---GA------GATTC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6686 10 +     24756 gat---ga------gattc
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6680 10 +     16388 GAT---GA------GATTC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810990  7 -   3914936 t------t------gattc
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lophocebus_aterrimus.ctg367                               330322 10 -   1826925 GGT---GG------GGCTC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7385  9 +     19643 GGT---GG------G-GTA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041045  9 -   6120653 GGT---GG------G-GTA
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612377  7 +  59628241 t------t------gtatc
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_1757516                              42639 10 -     61512 GGT---GG------GGCTC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370300 10 -  60120075 GGT---GG------GGCTC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22555 10 +     30207 GGT---GG------GGCTC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19658 10 -     24934 GGT---GG------GGCTC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22507 10 +     30527 GGT---GG------GGCTC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33697 10 -     50087 GGT---GG------GGCTC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43468 10 +     51645 GGT---GG------GGCTC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412636 10 - 187317192 GGT---GG------GGCTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396859 10 +  25927173 GGT---GG------GGCTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46023 10 -     62418 GGT---GG------GGCTT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22678 10 +     24253 GGT---GG------GGCTC
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42499 10 +     59329 GGT---GG------GGCTC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268432 10 +    668171 GGT---GG------GGCTC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19613 10 +     21031 GGT---GG------GGCTC
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  210 10 +     17132 GGT---GG------GGCTC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220946  7 -    270270 a------t------gattt
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 3 C 0
s Mandrillus_leucophaeus.scaffold280                        319710 10 +  24302211 GGT---GG------GGCTC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354542 10 -    752769 GTT---GG------GGCTC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671225  7 -    737560 g------t------gattc
i Manis_javanica.JSZB01003497.1                          I 3 C 0
s Manis_pentadactyla.KN006162.1                             218516  7 +    317179 g------t------gattc
i Manis_pentadactyla.KN006162.1                          I 3 C 0
s Marmota_marmota.CZRN01000018.1                           7498676 10 +  40650429 agt---gg------gattc
i Marmota_marmota.CZRN01000018.1                         C 0 I 16
s Megaderma_lyra.MegLyr_scaffold_4542                       148134  7 +    207569 g------t------ggtgc
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23514  2 -     74585 -----------------tc
i Mellivora_capensis.MelCap_flattened_line_19308         I 4 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46338 10 -    140813 GTT---GG------GATTC
i Meriones_unguiculatus.MerUng_scaffold_7390             I 110 C 0
s Mico_argentatus.k141_582562                                 7607  9 +     17804 GTG---GG------G-CTC
i Mico_argentatus.k141_582562                            C 0 I 14
s Mico_humeralifer.k141_1180625                               8391  9 -     12984 GTG---GG------G-CCC
i Mico_humeralifer.k141_1180625                          C 0 I 14
s Mico_schneideri.k141_1877700                                     16342  9 -     26561 GTG---GG------G-CTC
i Mico_schneideri.k141_1877700                                 C 0 I 14
s Microcebus_murinus.CM007674.1                           74982291 10 +  93316391 GGT---GG------GATTC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41672  7 +    145209 T------A------GCTTC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182361  7 +    200668 g------t------gattt
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 3 C 0
s Miopithecus_ogouensis.k141_1534655                         19737 10 -     27822 GGT---GG------GGCTC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6000  7 +     27589 t------t------gattc
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 3 C 0
s Mirza_zaza.k141_766280                                     50086 10 -     62432 ggt---gg------gattc
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176540  7 +    366855 g------t------gattt
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15867  7 -     63510 T------C------AATGC
i Mungos_mungo.MunMun_flattened_line_18455               I 3 C 0
s Murina_feae.MurFea_scaffold_17764                          36392  7 +     47283 g------t------gattc
i Murina_feae.MurFea_scaffold_17764                      I 3 C 0
s Mus_caroli.FMAL02030609.1                                    105 10 +      5579 ggt---TG------GACTC
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41682059 10 + 129401213 GGT---TG------GACTC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39489672 10 + 130317789 GGT---TG------GACTC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                             14352453  7 +  14710649 t------t------gattc
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myotis_brandtii.KE162005.1                               9790408  7 +  10118263 g------t------gattc
i Myotis_brandtii.KE162005.1                             I 3 C 0
s Myotis_davidii.KB100139.1                                4384807 13 +   6019432 g------tgattgtgattc
i Myotis_davidii.KB100139.1                              I 3 C 0
s Myotis_lucifugus.GL429869.1                               380629  7 +   4330536 g------t------gattc
i Myotis_lucifugus.GL429869.1                            I 3 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117268  7 +    130748 a------t------gattc
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 3 C 0
s Nasalis_larvatus.k141_1350636                              26318 10 +     34575 GGT---GG------GGCTC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466387  7 -  31847680 t------t------gattc
i Neomonachus_schauinslandi.NINY01007730.1               I 3 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125177  7 -    149072 g------t------gattt
i Noctilio_leporinus.NocLep_scaffold_7894                I 3 I 10
s Nomascus_annamensis.k141_1771965                           51070  9 -    132029 GGT---TC------G-CTT
i Nomascus_annamensis.k141_1771965                       C 0 I 14
s Nomascus_concolor.k141_735679                               7165  9 -     16345 GGT---TC------G-CTT
i Nomascus_concolor.k141_735679                          C 0 I 14
s Nomascus_gabriellae.k141_57920                             13050  9 +     22201 GGT---TC------G-CTT
i Nomascus_gabriellae.k141_57920                         C 0 I 14
s Nomascus_siki_b.tarseq_93                            8411334  9 -  22158432 GGT---TC------G-CTT
i Nomascus_siki_b.tarseq_93                          C 0 I 14
s Nomascus_siki_a.k141_941534                                  23448  9 -     54323 GGT---TC------G-CTT
i Nomascus_siki_a.k141_941534                              C 0 I 14
s Nyctereutes_procyonoides.CAJHUB010000658.1                195979  7 +   9404916 t------t------gtatc
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 C 0
s Nycticebus_bengalensis.LG01                             93632676  9 + 196305487 GGT---GG------G-GTA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             2065  9 +      2758 GGT---GG------G-GTA
i Nycticebus_coucang.k141_8166032                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560930  9 - 199412804 GGT---GG------G-GTA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11044982 10 -  11899542 ggt---ag------gactt
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449175  7 +   2017862 t------t------gattc
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    89958 10 -    140218 GTT---GG------GATTC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104790 10 +    107918 GCT---GG------GGTTC
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11061  7 -     14239 g------t------gattc
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37018  7 +    559221 t------t------gtatc
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 C 0
s Otolemur_crassicaudatus.k141_649260                        36516  9 -     51505 GGT---GG------G-GTA
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             349530  9 +   1103335 GGT---GG------G-GTA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470159  9 - 189151597 cat---cG------G-CTC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   21933  7 -    230217 t------t------gattc
i Panthera_onca.PanOnc_flattened_line_3271               I 3 C 0
s Panthera_pardus.KV860321.1                              18459259  7 -  18783137 t------t------gattc
i Panthera_pardus.KV860321.1                             I 3 C 0
s Panthera_tigris.KE722367.1                               3969979  7 +   8748460 t------t------gattc
i Panthera_tigris.KE722367.1                             I 3 C 0
s Papio_anubis.CM001495.2                                   240550 10 - 183742232 GGT---GG------GGCTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7014 10 +     21308 GGT---GG------GGCTC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288053 10 -  20919399 GGT---GG------GGCTC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19669 10 -     27687 GGT---GG------GGCTC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12805 10 +     16796 GGT---GG------GGCTC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19615 10 -     23640 GGT---GG------GGCTC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12593  7 +     78924 t------c------gattc
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 C 0
s Perodicticus_ibeanus.k141_1921260                          22770  9 +     31479 GGT---GG------C-ATA
i Perodicticus_ibeanus.k141_1921260                      C 0 I 585
s Perodicticus_potto.k141_1854441                            15140  9 -     24908 GGT---GG------C-ATA
i Perodicticus_potto.k141_1854441                        C 0 I 575
s Peromyscus_maniculatus.KI615324.1                         244435 10 +  18517816 TTT---GG------GATTC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29662 10 -     56120 GGA---AG------GATTT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6469 10 +      7560 GCT---GG------GGCTC
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62177 10 -     63152 GGT---GG------GGCTC
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44776 10 +     45295 GGT---GG------GGCTC
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2454 10 +      5735 GGT---GG------GGCTC
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              568  7 +     22231 g------t------gattc
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 3 C 0
s Pithecia_albicans.k141_1239476                             62597 10 +    207309 GGT---GG-----GG-CTC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3693 10 -     25401 GGT---GG-----GG-CTC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29432 10 +     58159 GGT---GG-----GG-CTC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29708 10 +     63561 GGT---GG-----GG-CTC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29471 10 +     51148 GGT---GG-----GG-CTC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554440 10 -   4542175 GGT---GG-----GG-CTC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29455 10 +     51125 GGT---GG-----GG-CTC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5886  5 +     39866 GGG---GG-----------
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 4
s Plecturocebus_brunneus.k141_862875                           971  5 -      9282 GGG---GG-----------
i Plecturocebus_brunneus.k141_862875                     C 0 I 4
s Plecturocebus_caligatus.k141_1382851                       40375  5 -     87950 GGG---GG-----------
i Plecturocebus_caligatus.k141_1382851                   C 0 I 4
s Plecturocebus_cinerascens.k141_1164729                     40768  5 -     88961 GGG---GG-----------
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 4
s Plecturocebus_cupreus.k141_2351393                          5467  5 -     39403 GGG---GG-----------
i Plecturocebus_cupreus.k141_2351393                     C 0 I 4
s Plecturocebus_dubius.k141_1058799                          40421  5 +     87928 GGG---GG-----------
i Plecturocebus_dubius.k141_1058799                      C 0 I 4
s Plecturocebus_grovesi.k141_2013005                          5464  5 -     60166 GGG---GG-----------
i Plecturocebus_grovesi.k141_2013005                     C 0 I 4
s Plecturocebus_hoffmannsi.k141_3303950                      12400  5 -     67232 GGG---GG-----------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 4
s Plecturocebus_miltoni.k141_349282                          40316  5 -     90634 GGG---GG-----------
i Plecturocebus_miltoni.k141_349282                      C 0 I 4
s Plecturocebus_moloch.k141_1031110                          41784  5 +     89403 GGG---GG-----------
i Plecturocebus_moloch.k141_1031110                      C 0 I 4
s Pongo_abelii.CM009266.2                                   175297  9 - 189387572 GGT---TG------G-CTC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190115  9 -   9816681 GGT---TG------G-CTC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24951 10 +     69807 GGT---GG------GGCTC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42146 10 -     80239 ggt---gg------ggctc
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563768 10 -   2598838 GGT---GG------GATTC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1404 10 -      7103 ggt---gg------gattc
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2001 10 -     11706 ggt---gg------gattc
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5737 10 -     30655 ggt---gg------gattc
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32062 10 +     46564 ggt---gg------gattc
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92333 10 -     98465 ggt---gg------gattc
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5970 10 +     35169 ggt---gg------gattc
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            33874 10 +     52041 GTT---GG------GATTC
i Psammomys_obesus.NESX01036366.1                        I 110 C 0
s Pteronotus_parnellii.KE847780.1                            49606  7 -     66298 g------t------gattt
i Pteronotus_parnellii.KE847780.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2231  7 -     18639 t------t------gattc
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 3 C 0
s Pteropus_alecto.KB030862.1                               5838574  7 -  28871421 a------t------gattc
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Pteropus_vampyrus.KN525825.1                             3535140  7 -   4952924 a------t------gattc
i Pteropus_vampyrus.KN525825.1                           I 3 C 0
s Puma_concolor.QAVW01001104.1                            18096579  7 +  38429054 t------t------gagtc
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                             24342 10 +     91421 GGT---GG------GGCTC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150835 10 -   7812017 GGT---GG------GGCTC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5212 10 +     72585 GGT---GG------GGCTC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020152 10 -  90668790 GGA---TG------GATTC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911229  7 +   3329780 g------t------gattc
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 C 0
s Rhinopithecus_bieti.k119_221883                            26171 10 +     27361 ggt---gg------gactc
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119519 10 + 195417433 GGT---GG------GACTC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233779 10 -   7961872 ggt---gg------gactc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72557  7 -    116970 a------t------gattc
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 3 C 0
s Saguinus_bicolor.k141_1429097                               1560  9 +     27962 GTG---GG------G-CTC
i Saguinus_bicolor.k141_1429097                          C 0 I 14
s Saguinus_geoffroyi.k141_3779887                             1568  9 +      6077 GTG---GG------G-CTC
i Saguinus_geoffroyi.k141_3779887                        C 0 I 14
s Saguinus_imperator.k141_1898058                             1587  9 +      5971 GTG---GG------G-CTC
i Saguinus_imperator.k141_1898058                        C 0 I 14
s Saguinus_inustus.k141_2469308                               1641  9 +      5932 GTG---GG------G-CTC
i Saguinus_inustus.k141_2469308                          C 0 I 14
s Saguinus_labiatus.k141_1571581                              1786  9 -      2099 GTG---GG------G-CTC
i Saguinus_labiatus.k141_1571581                         C 0 I 14
s Saguinus_midas.LG03                                       388908  9 - 209938924 GTG---GG------G-CTC
i Saguinus_midas.LG03                                    C 0 I 14
s Saguinus_mystax.k141_8077960                                1589  9 +      5979 GTG---GG------G-CTC
i Saguinus_mystax.k141_8077960                           C 0 I 14
s Saguinus_oedipus.k141_1466288                               1955  9 -      4301 GTG---GG------G-CTC
i Saguinus_oedipus.k141_1466288                          C 0 I 14
s Sapajus_apella.ctg103                                     236043  9 +   5703754 GTG---GG------G-CTC
i Sapajus_apella.ctg103                                  C 0 I 14
s Sapajus_macrocephalus.k141_796559                           5633  9 +     21866 GTG---GG------G-CTC
i Sapajus_macrocephalus.k141_796559                      C 0 I 14
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113763 10 +    313613 g--gtg-t------gtttt
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22659 10 +     27374 GGT---GG------GGCTC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26178 10 +     58920 GGT---GG------GGCTC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12674 10 -     45317 GGT---GG------GGCTC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20332 10 -     42441 GGT---GG------GGCTC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23012 10 -     29113 GGT---GG------GGCTC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26081 10 -     48123 GGT---GG------GGCTC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46001 10 +     77746 GTT---GG------GATTC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856079  7 -   1910179 g------t------ccttt
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866046 10 +   3870691 AGT---GG------GATTC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4228  7 -     97271 t------t------ggttc
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122278  7 +    196729 T------T------GATGC
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 C 0
s Symphalangus_syndactylus.tarseq_199                       388306  9 +   1523678 GGT---TC------G-CTT
i Symphalangus_syndactylus.tarseq_199                    C 0 I 14
s Tadarida_brasiliensis.TadBra_scaffold_54991                11381  7 +     22964 g------t------gattc
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 386  7 +      5583 a------t------gattc
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 3 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189104  7 +    199430 g------t------gattc
i Tapirus_indicus.TapInd_scaffold_7432                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103060  7 -    539355 g------t------gattc
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 C 0
s Tarsius_lariang.k141_1780720                                4756  8 +      6850 GTT---GT------A-CT-
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4795  8 +     20590 GTT---GT------A-CT-
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350536 10 - 186847797 GGG---GG------GGCTC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              21992 10 -     33621 GGT---AG------GATTT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17507  7 -     31044 g------t------gagtc
i Tolypeutes_matacus.TolMat_scaffold_31955               I 3 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477424  7 -    610378 g------t------gattt
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_1189070                        18223 10 +     26378 GGT---GG------GGCTC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30907 10 -     78344 GGT---GG------GGCTC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17544 10 +     25722 GGT---GG------GGCTC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25769 10 -     62838 GGT---GG------GGCTC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25886 10 +     46913 GGT---GG------GGCTC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6694 10 -     28527 GGT---GG------GGCTC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27708 10 -     64340 GGT---GG------GGCTC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25745 10 -     63452 GGT---GG------GGCTC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7188 10 +     22490 GGT---GG------GGCTC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          616 10 -      6147 GGT---GG------GGCTC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7610 10 -     13050 ggt---gg------ggctc
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252849 10 -   6242583 ggt---gg------ggctc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58580 10 +     59866 GGT---GG------GGCTC
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831344 10 -   4065304 ggt---ga------gattc
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5860 10 -     70247 ggt---ga------gattc
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104989 10 -    105689 g--gta-t------ggttc
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179348  7 +   5085361 t------t------gattt
i Ursus_maritimus.KK499267.1                             I 3 C 0
s Varecia_rubra.k141_787544                                  22832 10 -     30710 GGT---GG------GATTC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21739 10 -    147434 ggt---gg------gattc
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102742  7 -    112863 t------t------gtatc
i Vulpes_lagopus.VulLag_flattened_line_12041             I 3 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171804 10 -    224448 ggt---gg------gattc
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26395  7 -     86975 t------t------gattc
i Zalophus_californianus.ZalCal_flattened_line_17732     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1049 10 +      2695 AAT---GG------GGTTC
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_28053       37455  0 +     38305 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254  0 -  37912305 C
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58212985 2740 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2813 48 +     36723 TT----TGT-------AGAGCA-TC----A-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGTC------C--A-GAAA-------G-TC-TT
s Acinonyx_jubatus.LLWD01001279.1                           810324 53 +   1699592 ttt---ttt-------atggca-cc----a-c-------ctt------------------------------t-tta--------a--t----------a---------g-cctggatc-ta-gaagcaacaatg-gc-tt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20412845 61 +  29979442 ttttttttttta----atagtg-ct----acc-------ttt------------------------------t-ttatagcctgga--t----------a---------g-actggatcc-a-ggaa-------g-gc-tt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 216
s Allactaga_bullata.AllBul_scaffold_20030                    15738 48 -     61208 TG----TGT-------GTAGTT-CC----A-T-------TGT-----------------------------CT-TTG--------A--A----------CCC-AAGTGAG-C------C-AA-GGGG-------A-GT-TT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45219 55 +     53615 tt----tgtagagcatagagca-tc----g-c-------ctt-----------------------------ct-ctg--------a--g----------tga-aactgggcc------a--a-aaag-------g-gc-tt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41140 55 +     44087 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13780 55 -     21945 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15456 55 +     32033 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69940 28 -     84148 --------------------------------------------------------------------------CTG--------A--A----------TGA-AACTGGGCT------C--A-GAAA-------G-GC-TT
i Alouatta_belzebul.k141_1011583                         I 14 C 0
s Alouatta_caraya.k141_1109140                               42169 28 -     78289 --------------------------------------------------------------------------CTG--------A--A----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Alouatta_caraya.k141_1109140                           I 14 C 0
s Alouatta_discolor.k141_2561099                             41619 28 +     55831 --------------------------------------------------------------------------GTG--------A--A----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Alouatta_discolor.k141_2561099                         I 14 C 0
s Alouatta_juara.k141_1687208                                40057 28 -     64179 --------------------------------------------------------------------------CTG--------A--A----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Alouatta_juara.k141_1687208                            I 14 C 0
s Alouatta_macconnelli.k141_361275                           21703 28 -     24835 --------------------------------------------------------------------------CTG--------A--A----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Alouatta_macconnelli.k141_361275                       I 14 C 0
s Alouatta_nigerrima.k141_376068                             38686 28 +     45454 --------------------------------------------------------------------------CTG--------A--A----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Alouatta_nigerrima.k141_376068                         I 14 C 0
s Alouatta_palliata.k141_638677                              44384 28 +     70886 --------------------------------------------------------------------------CTG--------A--A----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Alouatta_palliata.k141_638677                          I 14 C 0
s Alouatta_puruensis.k141_251022                              6509 28 +     30854 --------------------------------------------------------------------------CTG--------A--A----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Alouatta_puruensis.k141_251022                         I 14 C 0
s Alouatta_seniculus.k141_928287                             30648 28 +     42133 --------------------------------------------------------------------------CTG--------A--A----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Alouatta_seniculus.k141_928287                         I 14 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174398 47 -    412891 tg----tgt-------atagcc-cc----a-c-------ctt------------------c-----------t-ctg--------a--atcaaact--ga---------g-t------a-ta-ggaa-------g-ac-t-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Aotus_azarae.k141_118258                                   48463 28 -     65372 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTCGGCC------C--A-GAAA-------G-GC-TT
i Aotus_azarae.k141_118258                               I 14 C 0
s Aotus_griseimembra.k141_982342                             42210 28 +     43593 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTCGGCC------C--A-GAAA-------G-GC-TT
i Aotus_griseimembra.k141_982342                         I 14 C 0
s Aotus_nancymaae.KZ198451.1                                670223 28 +   5030052 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTTGGCC------C--A-GAAA-------G-GC-TT
i Aotus_nancymaae.KZ198451.1                             I 14 C 0
s Aotus_trivirgatus.k141_192090                              21865 28 -     23494 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTCGGCC------C--A-GAAA-------G-GC-TT
i Aotus_trivirgatus.k141_192090                          I 14 C 0
s Aotus_vociferans.k141_944972                                7001 28 +      8415 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTCGGCC------C--A-GAAA-------G-GC-TT
i Aotus_vociferans.k141_944972                           I 14 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13743 39 -     32367 tt----tat-------gtggca-tt----a-c-------tgt-----------------------------ct-c-c--------a--a----------tga-aa-t--g-g------cc-t-gggg--------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 4
s Arctocebus_calabarensis.k141_1364444                       17931 60 -     45910 ----------------------------------------ttttttttttaataaaatagccttttttttcct-ttg--------g--g----------taa-tgccatt-a------g--t-agag-------g-ga-tt
i Arctocebus_calabarensis.k141_1364444                   I 571 T 602
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2683 46 -     15198 tg----tgt-------atagcc-cc----t-c-------gtt------------------c-----------t-ctg--------a--atcaaact--ga---------g-t------gc-a-gg-a-------g-ac-t-
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 1
s Ateles_geoffroyi_b.tarseq_1536                               272447 28 +  21539123 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Ateles_geoffroyi_b.tarseq_1536                            I 14 C 0
s Ateles_belzebuth.k141_1572163                               8614 28 +     48076 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Ateles_belzebuth.k141_1572163                          I 14 C 0
s Ateles_chamek.k141_615173                                   3751 28 -     28759 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Ateles_chamek.k141_615173                              I 14 C 0
s Ateles_geoffroyi_a.k141_1283730                              31304 28 +     44353 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Ateles_geoffroyi_a.k141_1283730                          I 14 C 0
s Ateles_marginatus.k141_970259                              46675 28 -     71267 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Ateles_marginatus.k141_970259                          I 14 C 0
s Ateles_paniscus.k141_866194                                20734 28 -     33135 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Ateles_paniscus.k141_866194                            I 14 C 0
s Avahi_laniger.k141_2756659                                  3899 48 +     11645 tt----tat-------atagca-cc----a-c-------ctt-----------------------------ct-ctg--------a--c----------cca-aactagg-c------c--a-ggaa-------gctt-ct
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3900 48 -     19611 tt----tat-------atagca-cc----a-c-------ctt-----------------------------ct-ctg--------a--c----------cca-aactagg-c------c--a-ggaa-------gctt-ct
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5617 48 +     28062 TT----TGT-------AGAGCA-TC----C-C-------CCT-----------------------------CT-CCG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40911 48 -     91139 TT----TGT-------AGAGCA-TC----C-C-------CCT-----------------------------CT-CCG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18437 48 +     95584 TT----TGT-------AGAGCA-TC----C-C-------CCT-----------------------------CT-CCG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18350 48 +    119600 TT----TGT-------AGAGCA-TC----C-C-------CCT-----------------------------CT-CCG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7858 28 +     18648 --------------------------------------------------------------------------CTG--------A--G----------TGG-AACTGGGCC------C--A-GAAA-------G-AC-TT
i Callibella_humilis.k141_1233062                        I 14 C 0
s Callimico_goeldii.k141_1609886                              7521 28 -     13885 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-AC-TT
i Callimico_goeldii.k141_1609886                         I 14 C 0
s Callithrix_geoffroyi.k119_473390                           16219 28 +     17162 --------------------------------------------------------------------------CTG--------A--G----------TGG-AACTGGGCT------C--A-GAAA-------G-AC-TT
i Callithrix_geoffroyi.k119_473390                       I 14 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451174 28 + 189096842 --------------------------------------------------------------------------CTG--------A--G----------TGG-AACTGGGCC------C--A-GAAA-------G-AC-TT
i Callithrix_jacchus.pat_scaffold_3                      I 14 C 0
s Callithrix_kuhlii.k119_404482                              17467 28 -     18408 --------------------------------------------------------------------------CTG--------A--G----------TGG-AACTGGGCC------C--A-GAAA-------G-AC-TT
i Callithrix_kuhlii.k119_404482                          I 14 C 0
s CanFam4.chr16                                           42503115 56 +  60362399 ttt---ttta------atagtg-cc----act-------ttt------------------------------t-ttatagcctaga--t----------a---------g-attggatcc-a-agag-------g-gc-tt
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6751 56 -     23171 ttt---ttta------atagtg-cc----act-------ttt------------------------------t-ttatagcctaga--t----------a---------g-attggatcc-a-agag-------g-gc-tt
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220094 56 +   9314153 ttt---ttta------atagtg-cC----ACT-------TTT------------------------------T-TTATAGCCTAGA--T----------A---------G-ATTGGATC-CA-AGAG-------G-GC-TT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613229 56 +  59632846 ttt---ttta------atagtg-cc----act-------ttt------------------------------t-ttatagcctaga--t----------a---------g-attggatcc-a-agag-------g-gc-tt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104810 56 -  63665305 ttt---ttta------atagtg-cc----act-------ttt------------------------------t-ttatagcctaga--t----------a---------g-attggatcc-a-agag-------g-gc-tt
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2754 47 +      5315 tg----cgt-------atagcc-cc----a-c-------ctt------------------c-----------t-ctg--------a--atcaaact--ga---------g-t------g-ta-ggaa-------g-ac-t-
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 1
s Castor_canadensis.CasCan_scaffold_39952                    20106 31 -     39886 tt----tgt-------gtggca-cc----a-c-------tgc-----------------------------ct-ctg--------A--A----------CCA-ATG-----------------------------------
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 17
s Cavia_aperea.AVPZ01000300.1                              4993668 48 +  23392119 NN----NNN-------NNNNNN-NN----N-N-------NNN-----------------------------NN-NNA--------a--a----------cca-agccagg-c------tc-a-agga-------g-gc-ct
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997110 48 +  23407841 tt----att-------ttaaca-cc----a-c-------tgt-----------------------------tt-cca--------a--a----------cca-agccagg-a------tc-a-agga-------g-gc-ct
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60211 48 -     66877 TT----ATT-------TTAACA-CC----A-C-------TGT-----------------------------TT-CCA--------A--A----------CCA-AGCCAGG-A------T-CA-AGGA-------G-GC-CT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2753 28 -     12580 --------------------------------------------------------------------------CTG--------A--G----------TGG-AACTGGGCC------C--A-GAAA-------G-AC-TT
i Cebuella_niveiventris.k141_592277                      I 14 C 0
s Cebuella_pygmaea.k141_145798                               40639 28 +     53515 --------------------------------------------------------------------------CTG--------A--G----------TGG-AACTGGGCC------C--A-GAAA-------G-AC-TT
i Cebuella_pygmaea.k141_145798                           I 14 C 0
s Cebus_albifrons.Contig27                                  368842 28 -  26074798 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGTC------C--A-GAAA-------G-GC-TT
i Cebus_albifrons.Contig27                               I 14 C 0
s Cebus_olivaceus.k141_1404781                                5731 28 -     34880 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGTC------C--A-GAAA-------G-GC-TT
i Cebus_olivaceus.k141_1404781                           I 14 C 0
s Cebus_unicolor.k141_1654760                                64826 28 -     89041 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGTC------C--A-GAAA-------G-GC-TT
i Cebus_unicolor.k141_1654760                            I 14 C 0
s Ceratotherium_simum.JH767749.1                          15489858 48 -  27778364 tt----tgc-------acagcc-cc----a-c-------ctt------------------c-----------t-ctg--------a--a-c---c----a---------a-actaggccc-a-ggag-------g-gc-tt
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16691 48 +     27315 tt----tgc-------acagcc-cc----a-c-------ctt------------------c-----------t-ctg--------a--a-c---c----a---------a-actaggccc-a-ggag-------g-gc-tt
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138379 55 -   4669795 TT----TGTAGTGCGTAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42119 55 +     47900 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AACG-------G-GC-TT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          41952 55 -     44860 TT----TGTAGTGCGTAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41935 55 -    148725 TT----TGTAGTGCGTAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25033 55 -     40656 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5002 55 +     20796 TT----TGTAGAGCATAGAGCG-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9192 55 -     17524 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24914 55 -     34525 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9623 55 -     25376 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362222 55 -  39242232 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267930 55 +  21565898 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29391 55 -     45857 TT----GGTAGAGCATAGAGCA-TG----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25211 55 -     32606 TT----GGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTAGGCC------A--A-AAAG-------G-GC-TT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1364 55 +      8499 TT----TGTAGAGCATAGAGCA-TC----A-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22883 55 +     70610 TT----GGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19808 55 +     36323 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10506 48 -     19938 tt----tgt-------gtagct-cc----a-c-------ctt-----------------------------ct-ctg--------a--atcaatct--gg---------g-c------cc-a-gcag-------g-ac-tt
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 2
s Cheirogaleus_major.k141_666340                             28333 48 -     33796 TT----TAT-------ATAGCA-CC----C-C-------TTT-----------------------------CT-CTG--------A--C----------CCA-AACTGGG-C------C--A-GGAG-------GCTT-CT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2863 48 -     15404 tt----tat-------atagca-cc----c-c-------ttt-----------------------------ct-ctg--------a--c----------cca-aactggg-c------c--a-ggag-------gctt-ct
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6725 48 -     32913 TT----TGC-------AGAGTA-TC----A-C-------CTT-----------------------------CT-CTG--------G--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17138 48 -     40346 TT----TGC-------AGAGTA-TC----A-C-------CTT-----------------------------CT-CTG--------G--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17412 29 +    216457 ------------------------------------------------------------------------T-CTG--------G--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Cheracebus_regulus.k141_471822                         I 10 C 0
s Cheracebus_torquatus.k141_890198                           17204 30 +     39636 -----------------------------------------------------------------------CT-CTG--------G--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Cheracebus_torquatus.k141_890198                       I 18 C 0
s Chiropotes_albinasus.k141_1946120                           1587 26 +      5346 ----------------------------------------------------------------------------G--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Chiropotes_albinasus.k141_1946120                      I 16 C 0
s Chiropotes_israelita.k141_313004                           40257 48 -    112038 TT----TGT-------AGAGCA-TC----C-C-------CTT-----------------------------CT-CCG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5829 48 +     34062 TT----TGT-------AGAGCA-TC----C-C-------CTT-----------------------------CT-CCG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340705 55 +  18827391 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7250 55 -     44032 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302030 55 - 135778131 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406484 55 -   2368649 TT----TGTAGAGCACAGAGCG-CC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375662 40 - 200372422 -------------------gcg-cc----g-c-------ctt-----------------------------ct-ctg--------a--g----------tga-aactgggcc------a--a-aaag-------g-cc-tt
i Colobus_guereza.LG01                                   T 699 I 713
s Colobus_polykomos.k141_1559707                              6373 55 -      6605 TC----TGTAGAGCATAGAGCG-CC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-CC-TT
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35804995 32 +  53390261 tt----tgt-------gtagct-ct----g-t-------ctt------------------------------t-ctg--------a--gccagact---g-----------------------------------------
i Condylura_cristata.JH655891.1                          C 0 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           438 25 -      8242 tt----tat-------attgcc-ct----a-c-------ctt------------------c-----------t-ctg--------a--a----------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 21
s Cricetomys_gambianus.CriGam_scaffold_14425                 40031 31 -     83289 -----------------------------------------T-----------------------------CT-CTG--------A--A----------TCA-AACTGAG-C------C-CA-TGAG-------G-GC-TT
i Cricetomys_gambianus.CriGam_scaffold_14425             I 14 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1615 46 +     87169 ttt---ctt-------gtggca-cc----a-c-------ctt------------------------------t-tca--------a--t----------a---------g-cctggacc-ta-gaag-------a-gc-tt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642560 48 -   1526836 TT----TGT-------GTAGTG-CC----A-T-------TGT-----------------------------CT-CCA--------A--A----------GCA-AAGTAGG-C------C-CC-AGAG-------A-GC-TT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2638 54 +     50838 TT----GTT-------TTAACAAAATCTAA-C-------TAT-----------------------------CT-CCA--------A--A----------CCAAAGCTGGG-T------C-CA-TGAA-------G-GC-CT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1290 47 +     36344 TT----GTT-------CTAACA-CC----A-C-------TGT-----------------------------CT-CCA--------A--A----------TCA-AGCCAGG-A------T-CA-AGAG-------G-GG--T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2107844 48 -   2246927 tt----cac-------agagcc-cc----a-c-------ctt-----------------------------ct-ctg--------a--accactct--gg---------a-c------cc-a-gctg-------g-ac-tt
i Dasypus_novemcinctus.JH564415.1                        C 0 I 2
s Daubentonia_madagascariensis.ctg71                        290282 47 +  12879189 tt----tat-------acagcg-cc----a-c-------ctt-----------------------------ct-cgg--------a--a----------cca-gactggg-c------c--g-ggag-------g-gc-ct
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862420 46 -  20541912 tt----tgt-------acagcc-cc----a-c-------ctt------------------------------t-ctg--------a--atcaaact--ga---------g-t------g-ta-ggaa-------g-ac-t-
i Desmodus_rotundus.KZ672289.1                           I 1 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662150 48 -   1390856 tt----tgc-------acagcc-ct----a-c-------ctt------------------c-----------t-ctg--------a--a-c---c----a---------a-actaggccc-a-ggag-------g-gc-tt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136935 48 -    198055 tt----tgc-------acagcc-cc----a-c-------ctt------------------c-----------t-ctg--------a--a-c---c----a---------a-actaggccc-a-ggag-------g-gc-tt
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96022 48 -    115145 TT----GTT-------CTAACA-CC----A-T-------TGT-----------------------------TT-CCG--------A--A----------CCA-AGCCAGG-T------C-CA-AGAG-------G-GC-CT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7617 47 +     14636 TT----GTT-------TTAACA-cc----a-c-------tgt-----------------------------tt-cca--------a--a----------cca-agccagg--------tc-t-ggtg-------a-gc-at
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851363 25 - 111700974 tt----tat-------gttgcc-tc----a-c-------ctg-----------------------------ct-ctg--------a--a----------------------------------------------------
i Echinops_telfairi.JH980293.1                           C 0 I 3
s Eidolon_helvum.AWHC01266696.1                               3987 48 +     19438 tt----tat-------atagcg-cc----a-t-------ttt------------------c-----------t-ctg--------g--atcaaact--gg---------g-c------cc-a-ggag-------g-ac-tt
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10230 16 +     18970 -------------------------------------------------------------------------------------------------------A----TG-C------T-GA-GGAG-------G-GC-TT
i Ellobius_talpinus.LOJH01026522.1                       I 19 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28247 19 +    110024 TT----TGT-------ATAGCA-GC----A-G-------GAT-----------------------------G---------------------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 16
s Enhydra_lutris.KZ291758.1                               24913647 55 +  41312741 ttt---ttt-------atagtg-cc----aca-------ttt------------------------------t-ttatcgcctgga--t----------a---------g-actggatcc-a-ggaa-------g-ga-tt
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576051 48 +  14770903 tt----tgt-------ctagct-cc----a-c-------ctt------------------c-----------t-ctg--------a--atcaaact--ga---------g-t------a-aa-ggaa-------t-ac-tt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039131 48 -   4378816 tt----tgt-------atagcc-cc----a-c-------ctt------------------c-----------t-ctg--------a--a-c---c----a---------a-actgggct-tg-gaaa-------g-gc-tt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373065 48 +  39960074 tt----tgt-------atagcc-cc----a-c-------ctt------------------c-----------t-ctg--------a--a-c---c----a---------a-actgggct-tg-gaaa-------g-gc-tt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409851 48 -    498745 tt----tgt-------atagct-cc----a-c-------ctt------------------c-----------t-ctg--------a--a-c---c----a---------a-actgggct-tg-gaaa-------g-gc-tt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260228 55 +  21539334 TT----TGTAGAGCATAGAGCA-TT----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186244230 53 - 206538554 ttt---ttt-------atggca-cC----A-C-------CTT------------------------------T-TTA--------A--T----------A---------G-CCTGGATC-TA-GAAGCAACAATG-GC-TT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114016 53 - 205367284 ttt---ttt-------atggca-cC----A-C-------CTT------------------------------T-TTA--------A--T----------A---------G-CCTGGATC-TA-GAAGCAACAATG-GC-TT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25119 53 -     30238 ttt---ttt-------atggca-cc----a-c-------ctt------------------------------t-tta--------a--t----------a---------g-cctgaatc-ta-gaagcaacaatg-gc-tt
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     121399 29 -    137831 -----------------------------------------------------------------------CT-CTG--------A--C----------CCA-AACTGGG-C------C--G-GGAG-------G-GC-TT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             4940 29 +     22493 -----------------------------------------------------------------------CT-CTG--------A--C----------CCA-AACTGGG-C------C--G-GGAG-------G-GC-TT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            16996 29 -     32986 -----------------------------------------------------------------------CT-CTG--------A--C----------CCA-AACTCGG-C------C--G-GGAG-------G-GT-TT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               4603 48 +      5976 tt----tgt-------atagta-cc----a-c-------ctt-----------------------------ct-ctg--------a--a----------cca-aactggg-c------cc-a-ggag-------g-ga-tt
i Galeopterus_variegatus.GalVar_scaffold_132127          I 136 I 4
s Gorilla_beringei.k141_668773                                 103 48 -      1303 TT----TGT-------AGAGCA-TC----A-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGTC------C--A-GAAA-------G-GC-TT
i Gorilla_beringei.k141_668773                           n 51 C 0
s Gorilla_gorilla.LT578341.1                                252161 48 - 186649187 TT----TGT-------AGAGCA-TC----A-A-------ctt-----------------------------ct-ctg--------a--g----------tga-aactgggtc------c--a-gaaa-------g-gc-tt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28120 45 -    327341 TG---TTTT-------GCAGCA-CC----A-C-------CTT------------------------------T--TA--------A--T----------A---------G-CCTGGACC-TA-GAAG-------A-GC-GT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1924718 48 -  22651954 tt----gtt-------ctaaca-cc----a-c-------tgt-----------------------------ct-cca--------a--a----------cca-agccagg-c------cc-a-agag-------g-gc-ct
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547888 48 -   1711038 tt----tgt-------attgct-tc----a-g-------ctt------------------c-----------t-ctg--------a--atcaaact--ag---------g-c------cc-a-ggag-------g-at-tt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47204 48 +     49977 tt----tgt-------attgct-tc----a-g-------ctt------------------c-----------t-ctg--------a--atcaaact--ag---------g-c------cc-a-ggag-------g-at-tt
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140169 33 -    630532 ---------------------------------------CTT-----------------------------CT-CTG--------A--G----------TGA-ACCTAGGCT------C--A-GAAA-------G-GC-TT
i Hoolock_leuconedys.ctg274                                 I 14 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66601 46 +     83186 TT---TTTT-------GTGGCA-CC----A-C-------CTT------------------------------T-TTA--------A--T----------A---------G-CCTGGACC-TA-GAAG-------A-GC-TT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            68960 48 +    143317 TT----GTT-------TTAACA-TC----A-C-------TGT-----------------------------TT-CCA--------A--A----------CCA-AGCCAGG-A------T-CA-GGAG-------G-GC-CT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3204 33 +     12352 ---------------------------------------CTT-----------------------------CT-CTG--------A--G----------TGA-ACCTAGGCT------C--A-GAAA-------G-GC-TT
i Hylobates_agilis.k141_1155965                          I 14 C 0
s Hylobates_klossii.k141_738755                              10387 33 +     55766 ---------------------------------------CTT-----------------------------CT-CTG--------A--G----------TGA-ACCTAGGCT------C--A-GAAA-------G-GC-TT
i Hylobates_klossii.k141_738755                          I 14 C 0
s Hylobates_pileatus_b.LG02                                       2049983 33 + 191637585 ---------------------------------------CTT-----------------------------CT-CTG--------A--G----------TGA-ACCTAGGCT------C--A-GAAA-------G-GC-TT
i Hylobates_pileatus_b.LG02                                     I 14 C 0
s Hylobates_pileatus_a.tarseq_633                            7798861 33 +  11177569 ---------------------------------------CTT-----------------------------CT-CTG--------A--G----------TGA-ACCTAGGCT------C--A-GAAA-------G-GC-TT
i Hylobates_pileatus_a.tarseq_633                          I 14 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384487 41 +   7955117 TT----TGT-------GTAGCA-TC----A-C-------TGT-----------------------------TT-C-T--------A-AA----------TCA-AA-T--A-G------C-CCAGGAG--------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 4
s Indri_indri.k141_4600452                                    1405 48 -      1527 TT----TAT-------ATAGCA-CC----A-C-------CTT-----------------------------CT-CTG--------A--C----------CCA-AACTGGG-C------C--A-GGAG-------GCTT-CT
i Indri_indri.k141_4600452                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1236896 48 +   9596543 TG----TGT-------GTAGTT-CT----A-T-------CAt-----------------------------ct-ttg--------a--a----------cca-aattgag-c------c-aa-gggg-------a-gt-tt
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          40990 28 +    110728 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Lagothrix_lagothricha.k141_246028                      I 14 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59528 48 -     65777 tt----tgt-------ctagcc-cc----a-c-------att------------------c-----------t-ctg--------a--atcaaact--ga---------g-t------a-aa-ggaa-------t-cc-tt
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1670 28 -     13097 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Leontocebus_fuscicollis.k141_2994775                   I 14 C 0
s Leontocebus_illigeri.k141_2951200                           1621 28 +      5940 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Leontocebus_illigeri.k141_2951200                      I 14 C 0
s Leontocebus_nigricollis.k141_3905062                        1252 28 -      5717 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Leontocebus_nigricollis.k141_3905062                   I 14 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7885 28 -     11567 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-AC-TT
i Leontopithecus_chrysomelas.k141_1327670                I 14 C 0
s Leontopithecus_rosalia.k141_349454                          9266 28 -     12945 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-AC-TT
i Leontopithecus_rosalia.k141_349454                     I 14 C 0
s Lepilemur_ankaranensis.k141_567626                          6689 48 +     29618 TT----TAT-------ATAGCA-CC----A-C-------CTT-----------------------------CT-CTG--------A--C----------CCA-AACTGGG-C------C--A-GGAG-------GCTT-CT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6686 48 +     31569 TT----TAT-------ATAGCA-CC----A-C-------CTT-----------------------------CT-CTG--------A--C----------CCA-AACTGGG-C------C--A-GGAG-------GCTT-CT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6696 48 +     24756 tt----tat-------atagca-cc----a-c-------ctt-----------------------------ct-cgg--------a--c----------cca-aactggg-c------c--a-ggag-------gctt-ct
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6690 48 +     16388 TT----TAT-------ATAGCA-CT----A-C-------CTT-----------------------------CT-CTG--------A--C----------CCA-AACTGGG-C------C--A-GGAG-------GCTT-CT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        810997 55 -   3914936 ttt---ttt-------atagtg-cc----acc-------ttt------------------------------t-ttataccctgga--t----------a---------g-actggatac-a-ggag-------g-gc-tt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               330332 55 -   1826925 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7394 29 +     19643 -----------------------------------------------------------------------CT-CTG--------A--C----------TCA-AACTGGG-C------T--G-TGAG-------G-GC-TT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041054 29 -   6120653 -----------------------------------------------------------------------CT-CTG--------A--C----------TCA-AACTGGG-C------T--G-TGAG-------G-GC-TT
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612384 56 +  59628241 ttt---ttta------atagtg-cc----act-------ttt------------------------------t-ttatagcctaga--t----------a---------g-attggatcc-a-agag-------g-gc-tt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42649 55 -     61512 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370310 55 -  60120075 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22565 55 +     30207 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19668 55 -     24934 TT----TGTAGTGCATAGAGCA-TC----G-T-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22517 55 +     30527 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33707 55 -     50087 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43478 55 +     51645 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412646 55 - 187317192 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CC-TTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396869 55 +  25927173 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46033 55 -     62418 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22688 55 +     24253 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42509 55 +     59329 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268442 55 +    668171 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19623 55 +     21031 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  220 55 +     17132 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                220953 48 -    270270 tt----tat-------atagct-cc----a-c-------ttt------------------c-----------t-ctg--------a--atcaaact--gg---------g-c------cc-a-ggag-------g-ac-tt
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319720 55 +  24302211 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354552 55 -    752769 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671232 48 -    737560 ct----tgt-------atcacc-tc----a-c-------ttt------------------------------ctctg--------aact----------g---------a-actgggtcc-a-ggag-------g-gc-tt
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218523 48 +    317179 ct----tgt-------atcatc-tc----a-t-------ctt------------------------------ctctg--------aact----------g---------a-actgggccc-a-ggag-------g-gc-tt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498702 21 +  40650429 --------------------------------------------------------------------------c-t--------aa-a----------tca-aa-t--g-g------cc-caggag--------------
i Marmota_marmota.CZRN01000018.1                         I 16 I 4
s Megaderma_lyra.MegLyr_scaffold_4542                       148141 49 +    207569 tt----tgt-------gtagccccc----a-c-------ctt------------------c-----------t-ctg--------a--atcagact--gg---------g-c------cc-a-ggag-------g-cc-tt
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23516 55 -     74585 ttt---tgt-------atagtg-cc----acc-------ttt------------------------------t-ttatcgcctgga--t----------a---------g-actggatcc-a-ggaa-------g-gc-tc
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46348 48 -    140813 TT----TGT-------ACAACA-AC----A-C-------CAT-----------------------------CT-CTG--------A--G----------TCA-AACTGAG-C------C-CA-GGAG-------G-GC-TT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mico_argentatus.k141_582562                                 7630 28 +     17804 --------------------------------------------------------------------------CTG--------A--G----------TGG-AACTGGGCC------C--A-GAAA-------G-AC-TT
i Mico_argentatus.k141_582562                            I 14 C 0
s Mico_humeralifer.k141_1180625                               8414 28 -     12984 --------------------------------------------------------------------------CTG--------A--G----------TGG-AACTGGGCC------C--A-GAAA-------G-AC-TT
i Mico_humeralifer.k141_1180625                          I 14 C 0
s Mico_schneideri.k141_1877700                                     16365 28 -     26561 --------------------------------------------------------------------------CTG--------A--G----------TGG-AACTGGGCC------C--A-GAAA-------G-AC-TT
i Mico_schneideri.k141_1877700                                 I 14 C 0
s Microcebus_murinus.CM007674.1                           74982301 48 +  93316391 TT----TAT-------ATAGCA-CC----A-C-------TTT-----------------------------AT-CTG--------A--C----------CCA-AACTGGG-C------C--A-GGAG-------GCTT-CT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41679 25 +    145209 TT----TGT-------ATTGCC-TC----A-C-------CTT-----------------------------CG-CTC--------A--A----------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_2233                182368 47 +    200668 tt----cat-------atagcc-cc----a-c-------ctt------------------c-----------t-ctg--------a--atcaaact--ga---------g-t------a-ta-ggaa-------g-ac-t-
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 1
s Miopithecus_ogouensis.k141_1534655                         19747 55 -     27822 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6007 55 +     27589 ttt---ttt-------atagtg-cc----acc-------ttt------------------------------t-ttataccctgga--t----------a---------g-actggatcc-a-ggag-------g-gc-tt
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50096 48 -     62432 tt----tat-------atagca-cc----a-c-------ttt-----------------------------ct-ctg--------t--c----------cca-aactggg-c------c--a-ggag-------gctt-ct
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176547 47 +    366855 tg----tgg-------gtagcc-cc----a-t-------ctt------------------c-----------t-ctg--------a--atcaaact--ga---------G-T------A-CA-GGAA-------G-GC-T-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_18455                   15874 46 -     63510 TT---TTTT-------CCAGCA-CC----A-C-------CTT------------------------------T-TTA--------A--T----------A---------G-CCTGGACC-TA-GAAG-------A-GC-GT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36399 48 +     47283 tt----tat-------ctagct-cc----a-c-------ctt------------------c-----------t-ctg--------a--atcaaact--ga---------g-t------a-aa-ggaa-------t-ac-tt
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    115 48 +      5579 TT----CGT-------AGAGCA-GC----A-C-------CAT-----------------------------CT-CTG--------A--G----------GGA-AGCTGAG-C------A-CA-GAAG-------G-GC-TT
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41682069 48 + 129401213 TT----CGT-------AAAGCA-GC----A-C-------CAT-----------------------------CT-CTG--------A--G----------GGA-AACTTAG-C------A-CA-GAAG-------G-GT-TT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58215725 29 +  89631738 ------------------------------------------------------------------------a-gtg--------a--g----------gta-acccaat-c------ac-a-aaag-------a-gc-tt
i Mus_pahari.LT608297.1                                  I 2740 I 5
s Mus_spretus.CM004101.1                                  39489682 48 + 130317789 TT----CGT-------AAAGCA-GC----A-C-------CAT-----------------------------CT-CTG--------A--G----------GGA-AACTTAG-C------A-CA-GAAG-------G-GT-TT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                             14352460 55 +  14710649 ttt---ttt-------ataatg-cc----acc-------ttt------------------------------t-ttatcgcctgga--t----------a---------g-actggatcc-a-ggaa-------g-gc-tt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790415 48 +  10118263 tt----tgt-------ttaccc-tc----a-t-------ctt------------------c-----------t-ctg--------a--atcaaact--ga---------g-t------a-aa-ggaa-------t-ac-tt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4384820 48 +   6019432 tt----tgt-------ttagcc-cc----a-c-------ctt------------------c-----------t-ctg--------a--atcaaact--ga---------g-t------a-aa-ggaa-------t-ac-tt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380636 48 +   4330536 tt----tgt-------ttaccc-tc----a-t-------ctt------------------c-----------t-ctg--------t--atcaaact--ga---------g-t------a-aa-ggaa-------t-ac-tt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117275 48 +    130748 tt----ttt-------gcagct-cc----a-c-------ctt-----------------------------ct-ctg--------a--g-caaa-taagg---------g-c------cc-a-acag-------g-ac-tt
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 2
s Nasalis_larvatus.k141_1350636                              26328 55 +     34575 TT----TGTAGAGCATAGAGCA-TC----A-C-------CTT-----------------------------CT-CTG--------A--G----------GGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466394 55 -  31847680 ttt---ttt-------atagtg-cc----acc-------ttt------------------------------t-ttataccctgga--t----------a---------g-actggatcc-a-ggag-------g-gc-tt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125194 47 -    149072 tt----tgg-------agagcc-cc----a-c-------ctt------------------c-----------t-atg--------a--accaaacc--ta---------g-t------ac-a-ggaa-------g-ac-t-
i Noctilio_leporinus.NocLep_scaffold_7894                I 10 I 1
s Nomascus_annamensis.k141_1771965                           51093 33 -    132029 ---------------------------------------CTT-----------------------------CT-CTG--------A--G----------TGA-ACCTAGGCT------C--A-GAAA-------G-GC-TT
i Nomascus_annamensis.k141_1771965                       I 14 C 0
s Nomascus_concolor.k141_735679                               7188 33 -     16345 ---------------------------------------CTT-----------------------------CT-CTG--------A--G----------TGA-ACCTAGGCT------C--A-GAAA-------G-GC-TT
i Nomascus_concolor.k141_735679                          I 14 C 0
s Nomascus_gabriellae.k141_57920                             13073 33 +     22201 ---------------------------------------CTT-----------------------------CT-CTG--------A--G----------TGA-ACCTAGGCT------C--A-GAAA-------G-GC-TT
i Nomascus_gabriellae.k141_57920                         I 14 C 0
s Nomascus_siki_b.tarseq_93                            8411357 33 -  22158432 ---------------------------------------CTT-----------------------------CT-CTG--------A--G----------TGA-ACCTAGGCT------C--A-GAAA-------G-GC-TT
i Nomascus_siki_b.tarseq_93                          I 14 C 0
s Nomascus_siki_a.k141_941534                                  23471 33 -     54323 ---------------------------------------CTT-----------------------------CT-CTG--------A--G----------TGA-ACCTAGGCT------C--A-GAAA-------G-GC-TT
i Nomascus_siki_a.k141_941534                              I 14 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                195986 54 +   9404916 ttt---ttt-------atagtg-cc----a-c-------ttt------------------------------t-ttatagcctaga--t----------a---------g-attggatcc-a-agag-------g-gc-tt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93632685 29 + 196305487 -----------------------------------------------------------------------CT-CTG--------A--C----------TCA-AACTGGG-C------T--G-TGAG-------G-GC-TT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_8166032                             2074 29 +      2758 -----------------------------------------------------------------------CT-CTG--------A--C----------TCA-AACTGGG-C------T--G-TGAG-------G-GC-TT
i Nycticebus_coucang.k141_8166032                        C 0 I 4
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560939 29 - 199412804 -----------------------------------------------------------------------CT-CTG--------A--C----------TCA-AACTGGG-C------T--G-TGAG-------G-GC-TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11044992 49 -  11899542 tt----gtt-------ttaaaaaaa----a-c-------tgt-----------------------------ct-cCA--------A--A----------CCA-AGCTGGG-T------C-CA-GGAG-------G-AC-CT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449182 55 +   2017862 ttt---ttt-------atagtg-cc----acc-------ttt------------------------------t-ttataccctgga--t----------a---------g-actggatcc-a-ggag-------g-gc-ct
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    89968 26 -    140218 TT----TGT-------ATAGCA-TC----A-TCATCTCTGAT-----------------------------G---------------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 16
s Onychomys_torridus.OnyTor_scaffold_2487                   104800 48 +    107918 TT----TGA-------ACAGCA-GC----A-C-------TAT-----------------------------CT-CTA--------A--G----------TCA-AACTGAG-C------T-GA-AGAG-------G-GC-TT
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11068 47 -     14239 tt----cga-------ataacc-tc----a-c-------ttc-----------------------------ct-atg--------a--atgaaa-t--gg---------g-c------cc-a-gagg-------g-gt-gt
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37025 55 +    559221 ttt---ttt------tatagtg-ac----a-c-------ctt------------------------------t-ttatagcctaga--t----------a---------g-attggatcc-a-agag-------g-gc-tt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        36525 29 -     51505 -----------------------------------------------------------------------CT-CTG--------A--C----------CCA-AACCGGG-C------C--G-GGAG-------G-GC-TT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             349539 29 +   1103335 -----------------------------------------------------------------------CT-CTG--------A--C----------CCA-AACCGGG-C------C--G-AGAG-------G-GC-TT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470168 46 - 189151597 ------TGT-------AGAGCA-TC----A-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGTC------C--A-GAAA-------G-GC-TT
i Pan_troglodytes.CM009242.2                             C 0 I 3
s Panthera_onca.PanOnc_flattened_line_3271                   21940 53 -    230217 ttt---ttt-------ttggca-cc----a-c-------ctt------------------------------t-tta--------a--t----------a---------g-cctggatc-ta-gaagcaacaatg-gc-tt
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459266 53 -  18783137 ttt---ttt-------ttggca-cc----a-c-------ctt------------------------------t-tta--------a--t----------a---------g-cctggatc-ta-gaagcaacaatg-gc-tt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3969986 53 +   8748460 ttt---ttt-------ttggca-cc----a-c-------ctt------------------------------t-tta--------a--t----------a---------g-cctggatc-ta-gaagaaacaatg-gc-tt
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240560 55 - 183742232 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7024 55 +     21308 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGACC------A--A-AAAG-------G-GC-TT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288063 55 -  20919399 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19679 55 -     27687 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12815 55 +     16796 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19625 55 -     23640 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12600 46 +     78924 ttt---ttt-------atggca-gc----g-t-------cta------------------------------t-tta--------a--t----------a---------g-tctggatcc-a-gaag-------a-gc-tt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23364 58 +     31479 ----------------------------------------tttttttttaaataaaatagcctttttt--cct-ttg--------g--g----------taa-agccatt-a------g--t-agag-------g-ga-tt
i Perodicticus_ibeanus.k141_1921260                      I 585 T 614
s Perodicticus_potto.k141_1854441                            15724 58 -     24908 ----------------------------------------tttttttttaaataaaatagcctttttt--cct-ttg--------g--g----------taa-agccatt-a------g--t-agag-------g-ga-tt
i Perodicticus_potto.k141_1854441                        I 575 T 604
s Peromyscus_maniculatus.KI615324.1                         244445 48 +  18517816 TT----TGT-------ACAGCA-AC----A-C-------CAT-----------------------------CT-CGA--------A--G----------TCA-AACTGAG-C------T-GA-AGAG-------G-GC-TT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29672 48 -     56120 GT----GTT-------CTATCA-CC----A-C-------TGT-----------------------------CT-CCT--------A--A----------CCA-AGCCAGG-C------C-CA-GGAG-------T-GT-CT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6479 55 +      7560 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGCCC------A--A-AAAG-------G-GC-TT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62187 55 -     63152 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44786 55 +     45295 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2464 55 +      5735 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              575 47 +     22231 tt----ttt-------ctagt--cc----a-c-------ctt------------------c-----------t-cta--------a--atcaaact--ga---------g-t------a-aa-ggaa-------t-ac-tt
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62607 48 +    207309 TT----TGT-------AGAGCA-TC----A-C-------CTT-----------------------------CT-CCG--------A--G----------TGA-CACTGGGCC------C--A-GAAA-------G-GC-TT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3703 48 -     25401 TT----TGT-------AGAGCA-TC----A-C-------CTT-----------------------------CT-CCG--------A--G----------TGA-CACTGGGCC------C--A-GAAA-------G-GC-TT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29442 48 +     58159 TT----TGT-------AGAGCA-TC----A-C-------CTT-----------------------------CT-CCG--------A--G----------TGA-CACTGGGCC------C--A-GAAA-------G-GC-TT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29718 48 +     63561 TT----TGT-------AGAGCA-TC----A-C-------CTT-----------------------------CT-CCG--------A--G----------TGA-CACTGGGCC------C--A-GAAA-------G-GC-TT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29481 48 +     51148 TT----TGT-------AGAGCA-TC----A-C-------CTT-----------------------------CT-CCG--------A--G----------TGA-CACTGGGCC------C--A-GAAA-------G-GC-TT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554450 48 -   4542175 TT----TGT-------AGAGCA-TC----A-C-------CTT-----------------------------CT-CCG--------A--G----------TGA-CACTGGGCC------C--A-GAAA-------G-GC-TT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29465 48 +     51125 TT----TGT-------AGAGCA-TC----A-C-------CTT-----------------------------CT-CCG--------A--G----------TGA-CACTGGGCC------C--A-GAAA-------G-GC-TT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5895 48 +     39866 TT----TGC-------AGAGTA-TC----A-C-------CTT-----------------------------CT-CTG--------G--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Plecturocebus_bernhardi.k141_2549090                   I 4 C 0
s Plecturocebus_brunneus.k141_862875                           980 48 -      9282 TT----TGC-------AGAGTA-TC----A-C-------CTT-----------------------------CT-CTG--------G--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Plecturocebus_brunneus.k141_862875                     I 4 C 0
s Plecturocebus_caligatus.k141_1382851                       40384 48 -     87950 TT----TGC-------AGAGTA-TC----A-C-------CTT-----------------------------CT-CTG--------G--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Plecturocebus_caligatus.k141_1382851                   I 4 C 0
s Plecturocebus_cinerascens.k141_1164729                     40777 48 -     88961 TT----TGC-------AGAGTA-TC----A-C-------CTT-----------------------------CT-CTG--------G--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Plecturocebus_cinerascens.k141_1164729                 I 4 C 0
s Plecturocebus_cupreus.k141_2351393                          5476 48 -     39403 TT----TGC-------AGAGTA-TC----A-C-------CTT-----------------------------CT-CTG--------G--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Plecturocebus_cupreus.k141_2351393                     I 4 C 0
s Plecturocebus_dubius.k141_1058799                          40430 48 +     87928 TT----TGC-------AGAGTA-TC----A-C-------CTT-----------------------------CT-CTG--------G--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Plecturocebus_dubius.k141_1058799                      I 4 C 0
s Plecturocebus_grovesi.k141_2013005                          5473 48 -     60166 TT----TGC-------AGAGTA-TC----A-C-------CTT-----------------------------CT-CTG--------G--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Plecturocebus_grovesi.k141_2013005                     I 4 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12409 48 -     67232 TT----TGC-------AGAGTA-TC----A-C-------CTT-----------------------------CT-CTG--------G--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Plecturocebus_hoffmannsi.k141_3303950                  I 4 C 0
s Plecturocebus_miltoni.k141_349282                          40325 48 -     90634 TT----TGC-------AGAGTA-TC----A-C-------CTT-----------------------------CT-CTG--------G--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Plecturocebus_miltoni.k141_349282                      I 4 C 0
s Plecturocebus_moloch.k141_1031110                          41793 48 +     89403 TT----TGC-------AGAGTA-TC----A-C-------CTT-----------------------------CT-CTG--------G--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Plecturocebus_moloch.k141_1031110                      I 4 C 0
s Pongo_abelii.CM009266.2                                   175306 48 - 189387572 TT----TGT-------AGAGCA-TC----A-C-------CTT-----------------------------CT-TTG--------A--G----------TGA-AACTGGGTC------C--A-GAAA-------G-GC-TT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190124 48 -   9816681 TT----TGT-------AGAGCA-TC----A-C-------CTT-----------------------------CT-TTG--------A--G----------TGA-AACTGGGTC------C--A-GAAA-------G-GC-TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              24961 55 +     69807 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42156 55 -     80239 tt----tgtagagcatagagca-tc----g-c-------ctt-----------------------------ct-ctg--------a--g----------tga-aactgggcc------a--a-aaag-------g-gc-tt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563778 48 -   2598838 TT----TAT-------ATAGCA-CC----A-C-------CTT-----------------------------CT-CTG--------A--C----------CCA-AACTGGG-C------C--A-GGAA-------GCTT-CT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1414 48 -      7103 tt----tat-------atagca-cc----a-c-------ctt-----------------------------ct-ctg--------a--c----------cca-aactggg-c------c--a-ggaa-------gctt-ct
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2011 48 -     11706 tt----tat-------atagca-cc----a-c-------ctt-----------------------------ct-ctg--------a--c----------cca-gactggg-c------c--a-ggaa-------gctt-ct
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5747 48 -     30655 tt----tat-------atagca-cc----a-c-------ctt-----------------------------ct-ctg--------a--c----------cca-gactggg-c------c--a-ggaa-------gctt-ct
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32072 48 +     46564 tt----tat-------atagca-cc----a-c-------ctt-----------------------------ct-ctg--------a--c----------cca-gactggg-c------c--a-ggaa-------gctt-ct
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92343 48 -     98465 tt----tat-------atagca-cc----a-c-------ctt-----------------------------ct-ctg--------a--c----------cca-aactggg-c------c--a-ggaa-------gctt-ct
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          5980 48 +     35169 tt----tat-------atagca-cc----a-c-------ctt-----------------------------ct-ctg--------a--c----------cca-aactggg-c------c--a-ggaa-------gctt-ct
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            33884 48 +     52041 TT----TGT-------ACAACA-AC----A-C-------CAT-----------------------------CT-CTG--------A--G----------TCA-AACTGAG-C------C-CA-GGAG-------G-GC-TT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49613 47 -     66298 tg----ggt-------gtagcc-cc----a-c-------ttt------------------c-----------t-cag--------a--atcaaact--ga---------g-a------a-ta-ggaa-------g-ac-t-
i Pteronotus_parnellii.KE847780.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2238 55 -     18639 ttt---ttt-------atagtg-cc----acc-------ttt------------------------------t-ttatcacctgga--t----------a---------g-actggatc-ta-ggaa-------g-gc-tt
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838581 48 -  28871421 tt----tat-------atagct-ct----a-c-------ttt------------------c-----------t-ctg--------a--atcaaact--gg---------g-c------tc-a-ggag-------g-ac-tt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535147 48 -   4952924 tt----tat-------atagct-ct----a-c-------tttt-----------------------------t-ctg--------a--atcaaact--gg---------g-c------tc-a-ggag-------g-ac-tt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096586 54 +  38429054 ttt---ttt-------atggca-cc----a-c-------ctt------------------------------t-tta--------a--t----------a---------g-cctggagc-tactaagcaacaatg-gc-tt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24352 55 +     91421 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150845 55 -   7812017 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5222 55 +     72585 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020162 48 -  90668790 TT----TGT-------AGAGCA-AC----A-C-------AAT-----------------------------CT-CTG--------A--G----------GGA-AAGTGAG-G------A-CA-GAAC-------G-GC-TT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911236 48 +   3329780 tt----tgt-------attgct-cc----a-c-------ctt------------------c-----------t-ctg--------a--aacaaact--gg---------g-c------tc-a-ggaa-------g-gc-tt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26181 55 +     27361 tt----tgtagagcacagagca-tc----g-c-------ctt-----------------------------ct-ctg--------a--g----------tgg-aactgggcc------a--g-aaag-------g-gc-tt
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119529 55 + 195417433 TT----TGTAGAGCACAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGG-AACTGGGCC------A--G-AAAG-------G-GC-TT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233789 55 -   7961872 tt----tgtagagcacagagca-tc----g-c-------ctt-----------------------------ct-ctg--------a--g----------tgg-aactgggcc------a--g-aaag-------g-gc-tt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72564 48 -    116970 tt----tat-------atagct-cc----a-c-------gtc------------------c-----------t-ctg--------a--atcaaact--gg---------g-c------cc-a-ggag-------g-ac-tt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1583 28 +     27962 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Saguinus_bicolor.k141_1429097                          I 14 C 0
s Saguinus_geoffroyi.k141_3779887                             1591 28 +      6077 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAG-------G-GC-TT
i Saguinus_geoffroyi.k141_3779887                        I 14 C 0
s Saguinus_imperator.k141_1898058                             1610 28 +      5971 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Saguinus_imperator.k141_1898058                        I 14 C 0
s Saguinus_inustus.k141_2469308                               1664 28 +      5932 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Saguinus_inustus.k141_2469308                          I 14 C 0
s Saguinus_labiatus.k141_1571581                              1809 28 -      2099 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Saguinus_labiatus.k141_1571581                         I 14 C 0
s Saguinus_midas.LG03                                       388931 28 - 209938924 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Saguinus_midas.LG03                                    I 14 C 0
s Saguinus_mystax.k141_8077960                                1612 28 +      5979 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Saguinus_mystax.k141_8077960                           I 14 C 0
s Saguinus_oedipus.k141_1466288                               1978 28 -      4301 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAG-------G-GC-TT
i Saguinus_oedipus.k141_1466288                          I 14 C 0
s Sapajus_apella.ctg103                                     236066 28 +   5703754 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Sapajus_apella.ctg103                                  I 14 C 0
s Sapajus_macrocephalus.k141_796559                           5656 28 +     21866 --------------------------------------------------------------------------CTG--------A--G----------TGA-AACTGGGCC------C--A-GAAA-------G-GC-TT
i Sapajus_macrocephalus.k141_796559                      I 14 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113773 46 +    313613 tt----tgt-------atagcc-cc----a-t-------ctt------------------------------t-ttg--------a--accagagt---g---------g-t------cc-a-gatg-------g-gc-tt
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22669 55 +     27374 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26188 55 +     58920 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12684 55 -     45317 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20342 55 -     42441 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23022 55 -     29113 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26091 55 -     48123 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46011 28 +     77746 TT----TTT-------ATATGA-GC----A-C-------CAT-----------------------------CT-CTG--------A--A----------TCA---------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 8
s Solenodon_paradoxus.SolPar_flattened_line_126            1856086 40 -   1910179 tc----cat-------gtagtc-cc----a-c-------ctt-----------------------------ct-ctg--------a--a----------g---------g-c------tc-a-ggag-------g-ac-tt
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866056 41 +   3870691 TT----TGT-------GTAGCA-TC----A-C-------TGT-----------------------------TT-C-T--------A-AA----------TCA-AA-T--G-G------C-CCAGGAG--------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_13525              4235 56 -     97271 ttt---ttt-------atagtg-tc----acc-------ttt------------------------------tattatcacctgga--t----------a---------a-actggatcc-a-ggaa-------g-gc-tt
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122285 46 +    196729 TG---TTTT-------GCAGCA-CC----A-C-------CTT------------------------------T-TTA--------A--T----------A---------G-CCTGGACC-TA-GAAG-------A-GC-AT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388329 33 +   1523678 ---------------------------------------CTT-----------------------------CT-CTG--------A--G----------TGA-ACCTAGGCT------C--A-GAAA-------G-GC-TT
i Symphalangus_syndactylus.tarseq_199                    I 14 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11388 48 +     22964 tt----tgt-------ctagcc-cc----a-c-------ctt------------------c-----------t-ctg--------a--atcaaact--ga---------g-t------gc-a-ggaa-------g-ac-tt
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 393 48 +      5583 tt----tat-------gcagct-cc----a-c-------ctt-----------------------------ct-ctg--------a--g-caaa-taagg---------g-c------cc-a-acag-------g-ac-tt
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 2
s Tapirus_indicus.TapInd_scaffold_7432                      189111 48 +    199430 tc----tgt-------atagtc-tc----a-c-------cttt-----------------------------t-gtg--------a--a-c----t---a---------a-actgggccc-a-agag-------g-gt-tt
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103067 48 -    539355 tc----tgt-------atagtc-cc----a-c-------cttt-----------------------------t-ctg--------a--a-c----t---a---------a-actgggccc-a-ggag-------g-gc-tt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                           350546 55 - 186847797 TT----TGTAGTGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22002 48 -     33621 TT----GTT-------CTAACA-CT----A-C-------CGT-----------------------------CT-CTA--------A--A----------CCA-AACCAGG-C------C-CA-AGAG-------T-GC-CT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17514 48 -     31044 tt----tat-------gtagtc-cc----a-c-------ctt-----------------------------ct-ctg--------a--atcaatct--gg---------g-c------cc-a-gcag-------g-ac-tt
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_294                    477431 46 -    610378 tg----tgt-------atagct-cc----a-c-------ctt------------------c-----------t-ctg--------a--accaaact--ga---------g-t------ac-a-gg-a-------g-ac-t-
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_1189070                        18233 55 +     26378 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30917 55 -     78344 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17554 55 +     25722 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25779 55 -     62838 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25896 55 +     46913 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6704 55 -     28527 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27718 55 -     64340 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25755 55 -     63452 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7198 55 +     22490 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          626 55 -      6147 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7620 55 -     13050 tt----tgtagagcatagagca-tc----g-c-------ctt-----------------------------ct-ctg--------a--g----------tga-aactgggcc------a--a-aaag-------g-gc-tt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252859 55 -   6242583 tt----tgtagagcatagagca-tc----g-c-------ctt-----------------------------ct-ctg--------a--g----------tga-aactgggcc------a--a-aaag-------g-gc-tt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58590 55 +     59866 TT----TGTAGAGCATAGAGCA-TC----G-C-------CTT-----------------------------CT-CTG--------A--G----------TGA-AACTGGGCC------A--A-AAAG-------G-GC-TT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831354 48 -   4065304 tg----tgt-------atggca-tg----a-c-------ttt-----------------------------ct-ctg--------a--a----------aca-cacagag-c------cc-a-ggag-------g-ac-tt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5870 48 -     70247 tg----tgt-------atggca-tg----a-c-------ttt-----------------------------ct-cta--------a--a----------aca-cacagag-c------cc-a-ggag-------g-ac-tt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   104999 47 -    105689 tt----tgt-------atagcc-cc----a-t-------ctt------------------------------t-ctg--------a--atcatact---g---------g-a------ccta-aaag-------g-gc-tc
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179355 58 +   5085361 ttt---ttttta----atagtg-ct----acc-------ttt------------------------------t-ttatagcctgga--t----------a---------g-actggatcc-a-ggaa-------g-gc-tt
i Ursus_maritimus.KK499267.1                             C 0 I 229
s Varecia_rubra.k141_787544                                  22842 44 -     30710 TT----TAT-------ATAGCA-CC----A-C-------CTT-----------------------------CT-CTG--------A--C----------CCA-AACTAGG-C------C--A-GGAG-------G-G----
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21749 44 -    147434 tt----tat-------atagca-cc----a-c-------ctt-----------------------------ct-ctg--------a--c----------cca-aactagg-c------c--a-ggag-------g-g----
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102749 55 -    112863 ttt---ttt------tatagtg-gc----a-c-------ttt------------------------------t-ttatagcctaga--t----------a---------t-attggatcc-a-agag-------g-gc-tt
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171814 41 -    224448 ct----tgt-------atagca-tt----g-c-------tct-----------------------------tt-c-t--------aa-a----------cca-aa-t--g-g------cc-caggag--------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_17732         26402 55 -     86975 ttt---ttt-------atagtg-cc----acc-------ttt------------------------------t-ttataccctgga--t----------a---------g-actggatcc-a-ggag-------g-gc-tt
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1059 48 +      2695 CA----TGT-------GCAGTT-CC----A-T-------CAT-----------------------------CT-TTG--------A--A----------CCA-AAATGAA-C------C-AA-GGAG-------G-GT-TT
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_28053       37455  0 +     38305 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254  0 -  37912305 C
e Elephantulus_edwardii.JH947257.1                         9105070  0 -  10337057 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tarsius_wallacei.k141_226975                                4803  0 +     20590 C
e Tarsius_lariang.k141_1780720                                4764  0 +      6850 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791  5 +  29670104 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cricetulus_griseus.LT883664.1                          213112278  5 - 224834208 I
e Cephalopachus_bancanus.k141_72622                           1244  0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Carlito_syrichta.NW_007259797.1                           268072  0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2861 3 +     36723 C-G-A
s Acinonyx_jubatus.LLWD01001279.1                           810377 4 +   1699592 tgg-g
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 8
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413122 4 +  29979442 ctg-g
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 216 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15786 4 -     61208 CTG-G
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 24
s Allenopithecus_nigroviridis.k141_3755588                   45274 3 +     53615 c-g-a
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41195 3 +     44087 C-G-A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13835 3 -     21945 C-G-A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15511 3 +     32033 C-G-A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69968 3 -     84148 C-G-G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42197 3 -     78289 C-G-G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41647 3 +     55831 C-G-G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40085 3 -     64179 C-G-G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21731 3 -     24835 C-G-G
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38714 3 +     45454 C-G-G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44412 3 +     70886 C-G-G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6537 3 +     30854 C-G-G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30676 3 +     42133 C-G-G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174446 2 -    412891 --g-g
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Aotus_azarae.k141_118258                                   48491 3 -     65372 C-G-G
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42238 3 +     43593 C-G-G
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670251 3 +   5030052 C-G-G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21893 3 -     23494 C-G-G
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7029 3 +      8415 C-G-G
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13786 4 -     32367 ctg-g
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 4 I 33
s Arctocebus_calabarensis.k141_1364444                       17389 4 -     45910 C-TTA
i Arctocebus_calabarensis.k141_1364444                   T 602 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2730 2 -     15198 --g-g
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 1 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272475 3 +  21539123 C-G-G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8642 3 +     48076 C-G-G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3779 3 -     28759 C-G-G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31332 3 +     44353 C-G-G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46703 3 -     71267 C-G-G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20762 3 -     33135 C-G-G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3947 2 +     11645 --g-g
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3948 2 -     19611 --g-g
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5665 3 +     28062 C-G-G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40959 3 -     91139 C-G-G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18485 3 +     95584 C-G-G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18398 3 +    119600 C-G-G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7886 3 +     18648 C-G-G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7549 3 -     13885 C-G-G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16247 3 +     17162 C-G-G
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451202 3 + 189096842 C-G-G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17495 3 -     18408 C-G-G
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503171 4 +  60362399 ctg-g
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6807 4 -     23171 ctg-g
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220150 4 +   9314153 CTG-G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613285 4 +  59632846 ctg-g
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104866 4 -  63665305 ctg-g
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2802 2 +      5315 --g-g
i Carollia_perspicillata.CarPer_scaffold_170178          I 1 C 0
s Cavia_aperea.AVPZ01000300.1                              4993716 3 +  23392119 ctt--
i Cavia_aperea.AVPZ01000300.1                            C 0 I 30
s Cavia_porcellus.DS562891.1                               4997158 3 +  23407841 ctt--
i Cavia_porcellus.DS562891.1                             C 0 I 30
s Cavia_tschudii.CavTsc_scaffold_23560                       60259 3 -     66877 CTT--
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 30
s Cebuella_niveiventris.k141_592277                           2781 3 -     12580 T-G-G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40667 3 +     53515 T-G-G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368870 3 -  26074798 C-G-G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5759 3 -     34880 C-G-G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64854 3 -     89041 C-G-G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489906 4 -  27778364 ctg-g
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16739 4 +     27315 ctg-g
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138434 3 -   4669795 C-G-A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42174 3 +     47900 C-G-A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42007 3 -     44860 C-G-A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41990 3 -    148725 C-G-A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25088 3 -     40656 C-G-A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5057 3 +     20796 C-G-A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9247 3 -     17524 C-G-A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24969 3 -     34525 C-G-A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9678 3 -     25376 T-G-A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362277 3 -  39242232 C-G-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267985 3 +  21565898 C-G-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29446 3 -     45857 C-G-A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25266 3 -     32606 C-C-A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1419 3 +      8499 C-G-A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22938 3 +     70610 C-G-A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19863 3 +     36323 C-G-A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10556 1 -     19938 ----a
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 2 C 0
s Cheirogaleus_major.k141_666340                             28381 2 -     33796 --G-G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2911 2 -     15404 --g-g
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6773 3 -     32913 C-G-G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17186 3 -     40346 C-G-G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17441 3 +    216457 C-G-G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17234 3 +     39636 C-G-G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1613 3 +      5346 T-G-G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40305 3 -    112038 T-G-G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5877 3 +     34062 T-G-G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340760 3 +  18827391 C-G-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7305 3 -     44032 C-G-A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302085 3 - 135778131 C-G-A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406539 3 -   2368649 C-G-G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376415 3 - 200372422 c-g-g
i Colobus_guereza.LG01                                   I 713 C 0
s Colobus_polykomos.k141_1559707                              6428 3 -      6605 C-G-G
i Colobus_polykomos.k141_1559707                         C 0 C 0
s Condylura_cristata.JH655891.1                           35805031 4 +  53390261 ctg-g
i Condylura_cristata.JH655891.1                          I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           484 4 -      8242 ttg-g
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 21 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40062 4 -     83289 CTG-A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 24
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1661 4 +     87169 ctg-g
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642608 4 -   1526836 CTG-G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 8
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2692 4 +     50838 CTG-G
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 9
s Cuniculus_paca.CunPac_flattened_line_7025                   1337 4 +     36344 CTG-G
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 8
s Dasypus_novemcinctus.JH564415.1                          2107894 1 -   2246927 ----g
i Dasypus_novemcinctus.JH564415.1                        I 2 C 0
s Daubentonia_madagascariensis.ctg71                        290329 2 +  12879189 --g-g
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862467 2 -  20541912 --g-g
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662198 4 -   1390856 ctg-g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136983 4 -    198055 ctg-g
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96070 4 -    115145 CCT-G
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 6
s Dolichotis_patagonum.DolPat_scaffold_80628                  7664 3 +     14636 ctt--
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 28
s Eidolon_helvum.AWHC01266696.1                               4035 4 +     19438 tta-g
i Eidolon_helvum.AWHC01266696.1                          C 0 I 4
s Ellobius_lutescens.LOEQ01008920.1                          28282 4 +    110024 CTG-A
i Ellobius_lutescens.LOEQ01008920.1                      I 16 I 11
s Ellobius_talpinus.LOJH01026522.1                           10246 4 +     18970 CTG-A
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 11
s Enhydra_lutris.KZ291758.1                               24913702 4 +  41312741 ctg-g
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576099 4 +  14770903 ttg-g
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039179 4 -   4378816 ctg-g
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373113 4 +  39960074 ctg-g
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409899 4 -    498745 ctg-g
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260283 3 +  21539334 C-G-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186244283 4 - 206538554 TAG-G
i Felis_catus.CM001381.2                                 C 0 I 8
s Felis_catus_fca126.CM031415.1                          185114069 4 - 205367284 TAG-G
i Felis_catus_fca126.CM031415.1                          C 0 I 8
s Felis_nigripes.FelNig_flattened_line_31944                 25172 4 -     30238 tag-g
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 8
s Galago_moholi.ctg3793                                     121428 3 -    137831 C-T-A
i Galago_moholi.ctg3793                                  C 0 I 1
s Galago_senegalensis.k141_991736                             4969 3 +     22493 C-T-A
i Galago_senegalensis.k141_991736                        C 0 I 1
s Galagoides_demidoff.k141_561628                            17025 3 -     32986 C-T-A
i Galagoides_demidoff.k141_561628                        C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_74466               16796 4 +     18121 ctg-g
i Galeopterus_variegatus.GalVar_scaffold_74466           I 48 I 43
s Gorilla_beringei.k141_668773                                 151 3 -      1303 C-G-A
i Gorilla_beringei.k141_668773                           C 0 I 190
s Gorilla_gorilla.LT578341.1                                252209 3 - 186649187 c-g-a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28165 4 -    327341 CTG-G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1924766 4 -  22651954 ctg-g
i Heterocephalus_glaber.JH602082.1                       C 0 I 33
s Hipposideros_armiger.JXIK01000431.1                      1547936 4 -   1711038 ttg-g
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47252 4 +     49977 ttg-g
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140202 3 -    630532 T-G-G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66647 4 +     83186 CTG-G
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69008 3 +    143317 CTG--
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 9
s Hylobates_agilis.k141_1155965                               3237 3 +     12352 T-G-G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10420 3 +     55766 T-G-G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050016 3 + 191637585 T-G-G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798894 3 +  11177569 T-G-G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384532 4 +   7955117 CTG-G
i Ictidomys_tridecemlineatus.JH393364.1                  I 4 I 26
s Indri_indri.k141_4600452                                    1453 2 -      1527 --G-G
i Indri_indri.k141_4600452                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1236944 4 +   9596543 ctg-a
i Jaculus_jaculus.JH725527.1                             C 0 I 24
s Lagothrix_lagothricha.k141_246028                          41018 3 +    110728 C-G-G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59576 4 -     65777 ctg-g
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1698 3 -     13097 T-G-G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1649 3 +      5940 T-G-G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1280 3 -      5717 T-G-G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7913 3 -     11567 C-G-G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9294 3 -     12945 C-G-G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6737 2 +     29618 --G-G
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6734 2 +     31569 --G-G
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6744 2 +     24756 --g-g
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6738 2 +     16388 --G-G
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811052 4 -   3914936 ctg-g
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               330387 3 -   1826925 C-G-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7423 3 +     19643 C-T-A
i Loris_lydekkerianus.k141_2031736                       C 0 I 1
s Loris_tardigradus.ctg83                                  5041083 3 -   6120653 C-T-A
i Loris_tardigradus.ctg83                                C 0 I 1
s Lycaon_pictus.CM007581.1                                41612440 4 +  59628241 ctg-g
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42704 3 -     61512 T-G-A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370365 3 -  60120075 T-G-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22620 3 +     30207 C-G-A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19723 3 -     24934 C-G-A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22572 3 +     30527 C-G-A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33762 3 -     50087 C-G-A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43533 3 +     51645 C-G-A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412701 3 - 187317192 C-G-A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396924 3 +  25927173 C-G-A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46088 3 -     62418 C-G-A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22743 3 +     24253 T-G-A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42564 3 +     59329 C-G-A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268497 3 +    668171 C-A-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19678 3 +     21031 T-G-A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  275 3 +     17132 C-G-A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221001 4 -    270270 tta-g
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319775 3 +  24302211 C-G-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354607 3 -    752769 C-G-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671280 4 -    737560 ctg-g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218571 4 +    317179 ctg-g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498727 4 +  40650429 ctg-g
i Marmota_marmota.CZRN01000018.1                         I 4 I 8
s Megaderma_lyra.MegLyr_scaffold_4542                       148190 4 +    207569 tgg-g
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23571 4 -     74585 tta-g
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46396 4 -    140813 CTG-A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 26
s Mico_argentatus.k141_582562                                 7658 3 +     17804 C-G-G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8442 3 -     12984 T-G-G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16393 3 -     26561 C-G-G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982349 2 +  93316391 --G-G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182416 2 +    200668 --g-g
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         19802 3 -     27822 C-G-A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6062 4 +     27589 ctg-g
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50144 2 -     62432 --g-g
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176595 2 +    366855 --G-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15920 4 -     63510 CTG-G
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36447 4 +     47283 atg-g
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    163 4 +      5579 CGG-A
i Mus_caroli.FMAL02030609.1                              C 0 I 26
s Mus_musculus.chr8                                       41682117 4 + 129401213 CTG-A
i Mus_musculus.chr8                                      C 0 I 26
s Mus_spretus.CM004101.1                                  39489730 4 + 130317789 CTG-A
i Mus_spretus.CM004101.1                                 C 0 I 26
s Mustela_putorius.JH418006.1                             14352515 4 +  14710649 ctg-g
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790463 4 +  10118263 ttg-g
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4384868 4 +   6019432 ttg-g
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380684 4 +   4330536 ttg-g
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117325 1 +    130748 ----g
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 2 C 0
s Nasalis_larvatus.k141_1350636                              26383 3 +     34575 C-G-G
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466449 4 -  31847680 ctg-g
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125242 2 -    149072 --c-g
i Noctilio_leporinus.NocLep_scaffold_7894                I 1 C 0
s Nomascus_annamensis.k141_1771965                           51126 3 -    132029 T-G-G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7221 3 -     16345 T-G-G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13106 3 +     22201 T-G-G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411390 3 -  22158432 T-G-G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23504 3 -     54323 T-G-G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196040 4 +   9404916 ctg-g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93632714 3 + 196305487 C-T-A
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_3846325                              365 3 -      3937 a-g-a
i Nycticebus_coucang.k141_3846325                        I 68 I 221
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560968 3 - 199412804 C-T-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Octodon_degus.JH651603.1                                11045041 4 -  11899542 CTg-g
i Octodon_degus.JH651603.1                               C 0 I 8
s Odobenus_rosmarus.KB229312.1                             1449237 4 +   2017862 ctg-g
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90010 4 -    140218 CTG-A
i Ondatra_zibethicus.OndZib_scaffold_7387                I 16 I 11
s Onychomys_torridus.OnyTor_scaffold_2487                   104848 4 +    107918 CTG-A
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 I 13
s Orycteropus_afer.OryAfe_flattened_line_171931              11115 1 -     14239 c----
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 2
s Otocyon_megalotis.JAEUCK010005147.1                        37080 4 +    559221 ctg-g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        36554 3 -     51505 C-T-A
i Otolemur_crassicaudatus.k141_649260                    C 0 I 1
s Otolemur_garnettii.GL873799.1                             349568 3 +   1103335 C-T-A
i Otolemur_garnettii.GL873799.1                          C 0 I 1
s Pan_troglodytes.KZ622849.1                                 30897 3 -    110857 C-G-A
i Pan_troglodytes.KZ622849.1                             I 346 I 174
s Panthera_onca.PanOnc_flattened_line_3271                   21993 4 -    230217 tag-g
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 8
s Panthera_pardus.KV860321.1                              18459319 4 -  18783137 tag-g
i Panthera_pardus.KV860321.1                             C 0 I 8
s Panthera_tigris.KE722367.1                               3970039 4 +   8748460 tag-g
i Panthera_tigris.KE722367.1                             C 0 I 8
s Papio_anubis.CM001495.2                                   240615 3 - 183742232 C-G-A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7079 3 +     21308 C-G-A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288118 3 -  20919399 C-G-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19734 3 -     27687 C-G-A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12870 3 +     16796 C-G-A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19680 3 -     23640 C-G-A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12646 4 +     78924 ctg-g
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22808 4 +     31479 C-TTA
i Perodicticus_ibeanus.k141_1921260                      T 614 I 1
s Perodicticus_potto.k141_1854441                            15178 4 -     24908 C-TGA
i Perodicticus_potto.k141_1854441                        T 604 I 1
s Peromyscus_maniculatus.KI615324.1                         244493 4 +  18517816 CTG-A
i Peromyscus_maniculatus.KI615324.1                      C 0 I 13
s Petromus_typicus.PetTyp_scaffold_17301                     29720 4 -     56120 TTG-G
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 33
s Piliocolobus_badius.k141_2495623                            6534 3 +      7560 C-G-A
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62242 3 -     63152 C-G-A
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44841 3 +     45295 C-G-A
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2519 3 +      5735 C-G-A
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              622 4 +     22231 ttg-g
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62655 3 +    207309 C-G-G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3751 3 -     25401 C-G-G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29490 3 +     58159 C-G-G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29766 3 +     63561 C-G-G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29529 3 +     51148 C-G-G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554498 3 -   4542175 C-G-G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29513 3 +     51125 C-G-G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5943 3 +     39866 C-G-G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1028 3 -      9282 C-G-G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40432 3 -     87950 C-G-G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40825 3 -     88961 C-G-G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5524 3 -     39403 C-G-G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40478 3 +     87928 C-G-G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5521 3 -     60166 C-G-G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12457 3 -     67232 C-G-G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40373 3 -     90634 C-G-G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41841 3 +     89403 C-G-G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175354 3 - 189387572 C-G-A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190172 3 -   9816681 C-G-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25016 3 +     69807 C-G-G
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42211 3 -     80239 c-g-g
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563826 2 -   2598838 --G-G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1462 2 -      7103 --g-g
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2059 2 -     11706 --g-g
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5795 2 -     30655 --g-g
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32120 2 +     46564 --g-g
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92391 2 -     98465 --g-g
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6028 2 +     35169 --g-g
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            33932 4 +     52041 CTG-A
i Psammomys_obesus.NESX01036366.1                        C 0 I 26
s Pteronotus_parnellii.KE847780.1                            49661 2 -     66298 --g-g
i Pteronotus_parnellii.KE847780.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2293 4 -     18639 ctg-g
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838629 4 -  28871421 tta-g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535195 4 -   4952924 tta-g
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096640 4 +  38429054 tag-g
i Puma_concolor.QAVW01001104.1                           C 0 I 8
s Pygathrix_cinerea.k141_1153803                             24407 3 +     91421 C-G-G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150900 3 -   7812017 C-G-G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5277 3 +     72585 C-G-G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020210 4 -  90668790 CTG-A
i Rattus_norvegicus.chr16                                C 0 I 26
s Rhinolophus_sinicus.LVEH01000134.1                       2911284 4 +   3329780 ttg-g
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26236 3 +     27361 c-g-g
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119584 3 + 195417433 C-G-G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233844 3 -   7961872 c-g-g
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72612 4 -    116970 ata-g
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1611 3 +     27962 T-G-G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1619 3 +      6077 T-G-G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1638 3 +      5971 T-G-G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1692 3 +      5932 T-G-G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1837 3 -      2099 T-G-C
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388959 3 - 209938924 T-G-G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1640 3 +      5979 T-G-G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2006 3 -      4301 T-G-G
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236094 3 +   5703754 C-A-G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5684 3 +     21866 C-G-G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113819 4 +    313613 ttg-g
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22724 3 +     27374 C-A-G
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26243 3 +     58920 C-A-G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12739 3 -     45317 C-A-G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20397 3 -     42441 C-A-G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23077 3 -     29113 C-A-G
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26146 3 -     48123 C-A-G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46047 4 +     77746 CTG-A
i Sigmodon_hispidus.SigHis_scaffold_20193                I 8 I 13
s Solenodon_paradoxus.SolPar_flattened_line_126            1856126 4 -   1910179 ctg-t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866101 4 +   3870691 CTG-G
i Spermophilus_dauricus.KZ294078.1                       I 4 I 26
s Spilogale_gracilis.SpiGra_flattened_line_13525              4291 4 -     97271 ctg-g
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122331 4 +    196729 CTG-G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388362 3 +   1523678 T-G-G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11436 4 +     22964 ttg-g
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 443 1 +      5583 ----g
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 2 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189159 4 +    199430 ctg-g
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103115 4 -    539355 ctg-g
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                           350601 3 - 186847797 C-G-A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22050 4 -     33621 TTG-G
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 8
s Tolypeutes_matacus.TolMat_scaffold_31955                   17564 1 -     31044 ----a
i Tolypeutes_matacus.TolMat_scaffold_31955               I 2 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477478 2 -    610378 --g-g
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_1189070                        18288 3 +     26378 C-A-G
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30972 3 -     78344 C-A-G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17609 3 +     25722 C-A-G
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25834 3 -     62838 C-A-G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25951 3 +     46913 C-A-G
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6759 3 -     28527 C-A-G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27773 3 -     64340 C-A-G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25810 3 -     63452 C-A-G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7253 3 +     22490 C-A-G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          681 3 -      6147 C-A-G
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7675 3 -     13050 c-a-g
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252914 3 -   6242583 c-a-g
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58645 3 +     59866 C-A-G
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831402 4 -   4065304 ctg-g
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5918 4 -     70247 ctg-g
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105046 4 -    105689 ctg-g
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179642 4 +   5085361 ctg-g
i Ursus_maritimus.KK499267.1                             I 229 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102804 4 -    112863 ctg-g
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171859 4 -    224448 ctg-g
i Xerus_inauris.XerIna_scaffold_2302                     I 4 I 9
s Zalophus_californianus.ZalCal_flattened_line_17732         26457 4 -     86975 ctg-g
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1107 4 +      2695 CTG-G
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 43
e Perognathus_longimembris.PerPac_flattened_line_28053       37455 0 +     38305 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254 0 -  37912305 C
e Microgale_talazaci.MicTal_scaffold_6613                    41704 3 +    145209 I
e Echinops_telfairi.JH980293.1                            62851388 3 - 111700974 I
e Elephantulus_edwardii.JH947257.1                         9105070 0 -  10337057 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Varecia_variegata.k141_289850                              21793 0 -    147434 C
e Varecia_rubra.k141_787544                                  22886 0 -     30710 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tarsius_wallacei.k141_226975                                4803 0 +     20590 C
e Tarsius_lariang.k141_1780720                                4764 0 +      6850 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754 5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17426791 5 +  29670104 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cricetulus_griseus.LT883664.1                          213112278 5 - 224834208 I
e Cephalopachus_bancanus.k141_72622                           1244 0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Carlito_syrichta.NW_007259797.1                           268072 0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2864 40 +     36723 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGG-TTC-T----GA---ATCCA-TT----------ATT----AC-AAA
s Acinonyx_jubatus.LLWD01001279.1                           810389 42 +   1699592 t-----aaca--------------------------t--c---ct-t-tttatctcat-ttcct----aa---agcca-tt----------gtt----gc-ata
i Acinonyx_jubatus.LLWD01001279.1                        I 8 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413126 42 +  29979442 t-----gaca--------------------------t--c---ct-g-tttatctcag-ttcct----aa---agcca-tt----------gtt----gc-aaa
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15814 18 -     61208 -------------------------------------------------------------------------------CTGAACCCATC-AT-----TG-AAG
i Allactaga_bullata.AllBul_scaffold_20030                I 24 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45277 41 +     53615 t-----g--a--------------------------c--ct--cg-g-tccatagaggcttc-t----ga---atcca-ta----------att----ac-gaa
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41198 41 +     44087 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13838 41 -     21945 T-----G--A--------------------------C--CT--TG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15514 41 +     32033 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             69971 41 -     84148 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42200 41 -     78289 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41650 41 +     55831 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40088 41 -     64179 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21734 41 -     24835 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38717 41 +     45454 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44415 41 +     70886 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6540 41 +     30854 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30679 41 +     42133 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174448 42 -    412891 t-----gaca--------------------------t--t---ct-a-ttcatctcag-ttcct----aa---agcca-tc----------act----gc-aaa
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48494 41 -     65372 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATTCA-TT----------ATT----AC-AAA
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42241 41 +     43593 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATTCA-TT----------ATT----AC-AAA
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670254 41 +   5030052 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATTCA-TT----------ATT----AC-AAA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21896 41 -     23494 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATTCA-TT----------ATT----AC-AAA
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7032 41 +      8415 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATTCA-TT----------ATT----AC-AAA
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13823 10 -     32367 -------------------------------------------------------------------------------tt----------att----gc-aag
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 33 C 0
s Arctocebus_calabarensis.k141_1364444                       17394 43 -     45910 T-----G--A--------------------------TATCA--CT-A-TTCATCTGGG-CTCCT----GA---ACCCA-TT----------ATT----AC-AAA
i Arctocebus_calabarensis.k141_1364444                   I 1 I 644
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2732 42 -     15198 t-----gaca--------------------------t--t---ct-g-ttcatctcag-ttcct----aa---agcca-tc----------att----gt-aaa
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272478 41 +  21539123 T-----G--C--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---CTCCA-TT----------ATT----AC-AAA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8645 41 +     48076 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---CTCCA-TT----------ATT----AC-AAA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3782 41 -     28759 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---CTCCA-TT----------ATT----AC-AAA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31335 41 +     44353 T-----G--C--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---CTCCA-TT----------ATT----AC-AAA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46706 41 -     71267 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---CTCCA-TT----------ATT----AC-AAA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20765 41 -     33135 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---CTCCA-TT----------ATT----AC-AAA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3949 43 +     11645 t-----g--a--------------------------catcc--ct-a-tccatctggg-ctcct----ga---accca-tt----------atc----gt-aaa
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3950 43 -     19611 t-----g--a--------------------------catcc--ct-a-tccatctggg-ctcct----ga---accca-tt----------atc----gt-aaa
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5668 41 +     28062 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCG-TT----------ATT----GC-AAA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  40962 41 -     91139 T-----G--A--------------------------C--CT--CT-A-TTCATAGAGGCTTC-T----GA---ATCCG-TT----------ATT----GC-AAA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18488 41 +     95584 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCG-TT----------ATT----GC-AAA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18401 41 +    119600 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCG-TT----------ATT----GC-AAA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7889 36 +     18648 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----------
i Callibella_humilis.k141_1233062                        C 0 I 1
s Callimico_goeldii.k141_1609886                              7552 36 -     13885 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---GTCCA-TT----------ATC----------
i Callimico_goeldii.k141_1609886                         C 0 I 1
s Callithrix_geoffroyi.k119_473390                           16250 36 +     17162 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----------
i Callithrix_geoffroyi.k119_473390                       C 0 I 1
s Callithrix_jacchus.pat_scaffold_3                      165451205 36 + 189096842 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----------
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 1
s Callithrix_kuhlii.k119_404482                              17498 36 -     18408 T-----G--A--------------------------C--CT--CT-G-ATCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----------
i Callithrix_kuhlii.k119_404482                          C 0 I 1
s CanFam4.chr16                                           42503175 42 +  60362399 t-----gaca--------------------------t--a---tt-g-tttatctcag-ttcct----aa---agcca-tt----------gtt----gc-aaa
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6811 42 -     23171 t-----gaca--------------------------t--a---tt-g-tttatctcag-ttcct----aa---agcca-tt----------gtt----gc-aaa
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220154 42 +   9314153 T-----GACA--------------------------T--A---TT-G-TTTATCTCAG-TTCCT----AA---AGCCA-TT----------GTT----GC-AAA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613289 42 +  59632846 t-----gaca--------------------------t--a---tt-g-tttatctcag-ttcct----aa---agcca-tt----------gtt----gc-aaa
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104870 42 -  63665305 t-----gaca--------------------------t--a---tt-g-tttatctcag-ttcct----aa---agcca-tt----------gtt----gc-aaa
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2804 42 +      5315 t-----gaca--------------------------t--t---ct-a-ttcatctcag-ttcct----aa---agcca-tc----------att----at-aaa
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993749 10 +  23392119 -------------------------------------------------------------------------------tt----------att----ac-aaa
i Cavia_aperea.AVPZ01000300.1                            I 30 C 0
s Cavia_porcellus.DS562891.1                               4997191 10 +  23407841 -------------------------------------------------------------------------------tt----------att----ac-aaa
i Cavia_porcellus.DS562891.1                             I 30 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60292 10 -     66877 -------------------------------------------------------------------------------TT----------ATT----AC-AAA
i Cavia_tschudii.CavTsc_scaffold_23560                   I 30 C 0
s Cebuella_niveiventris.k141_592277                           2784 36 -     12580 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----------
i Cebuella_niveiventris.k141_592277                      C 0 I 1
s Cebuella_pygmaea.k141_145798                               40670 36 +     53515 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----------
i Cebuella_pygmaea.k141_145798                           C 0 I 1
s Cebus_albifrons.Contig27                                  368873 41 -  26074798 T-----G--A--------------------------C--CT--CT-G-TTCACAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5762 41 -     34880 T-----G--A--------------------------C--CT--CT-G-TTCACAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64857 41 -     89041 T-----G--A--------------------------C--CT--CT-G-TTCACAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489910 43 -  27778364 t-----gaca--------------------------t--c---tctg-tccctctcag-ttcct----ga---agccg-tt----------att----gc-aaa
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16743 43 +     27315 t-----gaca--------------------------t--c---tctg-tccctctcag-ttcct----ga---agccg-tt----------att----gc-aaa
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138437 41 -   4669795 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42177 41 +     47900 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42010 41 -     44860 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          41993 41 -    148725 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25091 41 -     40656 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5060 41 +     20796 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-AAA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9250 41 -     17524 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          24972 41 -     34525 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9681 41 -     25376 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362280 41 -  39242232 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  267988 41 +  21565898 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29449 41 -     45857 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25269 41 -     32606 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1422 41 +      8499 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22941 41 +     70610 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19866 41 +     36323 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10557 43 -     19938 c-----aacc--------------------------t--t--cct-g-cctatctcgg-ttctt----ga---aacca-ct----------att----gc-aaa
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28383 43 -     33796 T-----G--A--------------------------CATCC--GT-G-CCCATCTAGG-TTCCT----GA---ACCCA-TT----------GTC----GT-AAA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2913 43 -     15404 t-----g--a--------------------------catcc--gt-g-cccatctagg-ctcct----ga---accca-tt----------gtc----gt-aaa
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6776 41 -     32913 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TG----------ATT----AC-AAA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17189 41 -     40346 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGTCTTC-T----GA---ATCCA-TG----------ATT----AC-AAA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17444 41 +    216457 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TG----------ATT----AC-AAA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17237 41 +     39636 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TG----------ATT----AC-AAA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1616 41 +      5346 T-----G--C--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCG-TC----------ATT----AC-AAA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40308 41 -    112038 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCG-TT----------ATT----GC-AAA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5880 41 +     34062 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCG-TT----------ATT----GC-AAA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340763 41 +  18827391 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---GTCCA-TA----------ATT----AC-GAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7308 41 -     44032 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGTTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302088 41 - 135778131 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406542 41 -   2368649 T-----G--A--------------------------C--CT--CG-G-TCCATGGAGGCTTC-T----GA---ATCCA-TC----------GTT----AT-GAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376418 41 - 200372422 t-----g--a--------------------------c--ct--cg-g-tccatagaggcttc-t----ga---atcca-tt----------gtt----ac-gaa
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_1559707                              6431 41 -      6605 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------GTT----AC-GAA
i Colobus_polykomos.k141_1559707                         C 0 N 0
s Condylura_cristata.JH655891.1                           35805035 42 +  53390261 t-----gata--------------------------t--g---aa-g-cccatctcag-tttct----aa---agcct-ta----------att----ac-aaa
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           488 44 -      8242 t-----gaca--t-----a-----------------t--c---ct-g-tccatctcag-ttcct----ga---agcca-cc----------att----gc-aaa
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40090 19 -     83289 -------------------------------------------------------------------------------CTGAAGCCA-CAGAT----GC-AAG
i Cricetomys_gambianus.CriGam_scaffold_14425             I 24 C 0
s Cricetulus_griseus.LT883664.1                          213112283 19 - 224834208 -------------------------------------------------------------------------------CTGAAGCCA-CAACT----GC-AAG
i Cricetulus_griseus.LT883664.1                          I 5 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1665 42 +     87169 t-----atca--------------------------t--c---ct-t-tttatctcag-ttcct----aa---agcca-tt----------gtt----gg-aaa
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642620 16 -   1526836 -------------------------------------------TT-G-TCCATCTGTA-CTC------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 8 I 10
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2705 17 +     50838 -------------------------------------------TT-CTTCCATCTGTG-TTT------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 9 I 19
s Cuniculus_paca.CunPac_flattened_line_7025                   1349 16 +     36344 -------------------------------------------CT-G-TCCATCTGTG-TTT------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              I 8 I 19
s Dasypus_novemcinctus.JH564415.1                          2107895 33 -   2246927 c-----gacc--------------------------t--t--cct-a-tcta----gg-ttctt----aa---aacca-tt----------at-----------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 3
s Daubentonia_madagascariensis.ctg71                        290331 42 +  12879189 t-----g--a--------------------------catcc--ct-g-tccatccggg-ctcct----ga---acccg-ct----------att----g--ata
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862469 42 -  20541912 t-----gaca--------------------------t--t---ct-t-cgcatctcag-ttctt----aa---agcca-tc----------att----ga-aaa
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662202 43 -   1390856 t-----gaca--------------------------t--c---tctg-tccctctcag-ttcct----ga---agccg-tt----------att----gc-aaa
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  136987 43 -    198055 t-----gaca--------------------------t--c---tctg-tccctctcag-ttcct----ga---agccg-tt----------att----gc-aaa
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7695 10 +     14636 -------------------------------------------------------------------------------tt----------atc----ac-aaa
i Dolichotis_patagonum.DolPat_scaffold_80628             I 28 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96080 16 -    115145 -------------------------------------------CT-G-TCCATCTGTG-CTT------------------------------------------
i Dinomys_branickii.DinBra_scaffold_10381                I 6 I 19
s Echinops_telfairi.JH980293.1                            62851391 62 - 111700974 ---------accttgcccagagagtttctagtgacat--c--cct-g-ttcaggccca-ttcct----ga---tg----tt----------att----gc-aaa
i Echinops_telfairi.JH980293.1                           I 3 C 0
s Eidolon_helvum.AWHC01266696.1                               4043 38 +     19438 ---------a--------------------------t--t---ct-g-ttcatcttag-cttct----ga---agcca-cc----------att----gc-aag
i Eidolon_helvum.AWHC01266696.1                          I 4 I 1
s Elephantulus_edwardii.JH947257.1                         9105070 20 -  10337057 ------------------------------------------------tttatattta-ttctt----aa---g----tc------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 5
s Ellobius_lutescens.LOEQ01008920.1                          28297 19 +    110024 -------------------------------------------------------------------------------CTGAAGCTA-CAATT----GC-AAG
i Ellobius_lutescens.LOEQ01008920.1                      I 11 C 0
s Ellobius_talpinus.LOJH01026522.1                           10261 19 +     18970 -------------------------------------------------------------------------------CTGAAGCCA-CAATT----GT-AAG
i Ellobius_talpinus.LOJH01026522.1                       I 11 C 0
s Enhydra_lutris.KZ291758.1                               24913706 42 +  41312741 t-----gaca--------------------------t--c---ct-g-tttatctcag-ttcct----aa---agtca-tt----------gtt----gc-aaa
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576103 42 +  14770903 t-----gaca--------------------------t--t---ct-g-tccatctcag-tttct----aa---agcca-tc----------att----gc-aaa
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039183 43 -   4378816 t-----gaca--------------------------t--c---cctg-tcagtctcag-ttcct----ga---agcca-tt----------att----gc-caa
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373117 43 +  39960074 t-----gaca--------------------------t--c---cctg-tcggtctcag-ttcct----ga---agcca-tt----------att----gc-caa
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409903 43 -    498745 t-----gaca--------------------------t--c---cctg-tcggtctcag-ttcct----ga---agcca-tt----------att----gc-caa
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260286 41 +  21539334 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186244295 42 - 206538554 T-----AACA--------------------------T--C---CT-T-TTTATCTCAT-TTCCT----AA---AGcca-tt----------gtt----gc-ata
i Felis_catus.CM001381.2                                 I 8 C 0
s Felis_catus_fca126.CM031415.1                          185114081 42 - 205367284 T-----AACA--------------------------T--C---CT-T-TTTATCTCAT-TTCCT----AA---AGCCA-TT----------GTT----GC-ATa
i Felis_catus_fca126.CM031415.1                          I 8 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25184 42 -     30238 t-----aaca--------------------------t--c---ct-t-tttatctcat-ttcct----aa---agcca-tt----------gct----gc-ata
i Felis_nigripes.FelNig_flattened_line_31944             I 8 C 0
s Galago_moholi.ctg3793                                     121432 43 -    137831 T-----G--A--------------------------CATCC--CT-G-TCCATCTGGG-CTCCT----GA---ACCCA-TT----------CTT----AC-AAA
i Galago_moholi.ctg3793                                  I 1 I 616
s Galago_senegalensis.k141_991736                             4973 43 +     22493 T-----G--A--------------------------CATCC--CT-G-TCCATCTGGG-CTCCT----GA---ACCCA-TT----------CTT----AC-AAA
i Galago_senegalensis.k141_991736                        I 1 I 615
s Galagoides_demidoff.k141_561628                            17029 43 -     32986 T-----G--A--------------------------TATCC--CT-G-TCCATCTGGG-CTCCT----GA---ACCCG-TT----------CTT----AC-AAA
i Galagoides_demidoff.k141_561628                        I 1 I 601
s Galeopterus_variegatus.GalVar_scaffold_132127               4655 43 +      5976 t-----gtca--------------------------t--cc--ct-g-tccatctggg-ctcct----ga---accca-tt----------att----gc-aaa
i Galeopterus_variegatus.GalVar_scaffold_132127          I 4 I 64
s Gorilla_beringei.k141_3358147                               3201 40 -      8343 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGG-TTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Gorilla_beringei.k141_3358147                          I 51 C 0
s Gorilla_gorilla.LT578341.1                                252212 40 - 186649187 t-----g--a--------------------------c--ct--cg-g-tccatagagg-ttc-t----ga---atcca-tt----------att----ac-aaa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28169 42 -    327341 T-----AGCA--------------------------T--C---CT-T-TTTATCTCAG-TTCCT----AA---AGcca-tt----------gtt----gc-aaa
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1924803 10 -  22651954 -------------------------------------------------------------------------------tt----------att----gc-aaa
i Heterocephalus_glaber.JH602082.1                       I 33 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547940 42 -   1711038 t-----gaca--------------------------t--t---ct-g-tccatctcag-ttcct----ga---agcca-tc----------att----gc-aaa
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47256 42 +     49977 t-----gaca--------------------------t--t---ct-g-tccatctcag-ttcct----ga---agcca-tc----------att----ac-aaa
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140205 40 -    630532 T-----G--A--------------------------C--CT--CT-G-TCCATAGAGA-TTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66651 43 +     83186 T-----AGCA--------------------------T--C---CT-TTTTTATCTCAG-TTCCT----AA---AGCGA-TT----------GTT----GC-AAA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69020 16 +    143317 -------------------------------------------CT-G-TCCATCTGTG-TTT------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 9 I 19
s Hylobates_agilis.k141_1155965                               3240 40 +     12352 T-----G--A--------------------------C--CT--CT-G-TCCATAGAGG-TTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10423 40 +     55766 T-----G--A--------------------------C--CT--CT-G-TCCATAGAGG-TTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050019 40 + 191637585 T-----G--A--------------------------C--CT--CT-G-TCCATAGAGA-TTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798897 40 +  11177569 T-----G--A--------------------------C--CT--CT-G-TCCACAGAGA-TTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384562 10 +   7955117 -------------------------------------------------------------------------------TT----------ATT----GA-AAG
i Ictidomys_tridecemlineatus.JH393364.1                  I 26 C 0
s Indri_indri.k141_4600452                                    1455 43 -      1527 T-----G--A--------------------------CATCC--CT-A-GCCATCTGGG-CTCCT----GA---ACCCA-TT----------ATC----GT-AAA
i Indri_indri.k141_4600452                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1236972 19 +   9596543 -------------------------------------------------------------------------------tgaaagccata-att----tg-aag
i Jaculus_jaculus.JH725527.1                             I 24 C 0
s Lagothrix_lagothricha.k141_246028                          41021 41 +    110728 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59580 42 -     65777 t-----gaca--------------------------t--t---ct-g-tccatctcag-tatct----aa---aaccc-tc----------att----ga-aaa
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1701 41 -     13097 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCG-TT----------ATT----AC-AAA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1652 41 +      5940 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCG-TT----------ATT----AC-AAA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1283 41 -      5717 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCG-TT----------ATT----AC-AAA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7916 27 -     11567 T-----G--A--------------------------C--CT--CT-G-TTCATAGAAGCTTC-T----GA---A------------------------------
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9297 27 -     12945 T-----G--A--------------------------C--CT--CT-G-TTCATAGAAGCTTC-T----GA---A------------------------------
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6739 43 +     29618 T-----A--A--------------------------CATCC--CT-G-TCCATCTGGG-CTCCT----GA---ACCCA-TT----------GTT----GT-AAA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6736 43 +     31569 T-----A--A--------------------------CATCC--CT-G-TCCATCTGGG-CTCCT----GA---ACCCA-TT----------GTT----GT-AAA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6746 43 +     24756 t-----a--a--------------------------catcc--ct-g-tccatctggg-ctcct----ga---accca-tt----------gtt----gt-aaa
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6740 43 +     16388 T-----A--A--------------------------CATCC--CT-G-TCCATCTGGG-CTCCT----GA---ACCCA-TT----------GTT----GT-AAA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811056 42 -   3914936 t-----gaca--------------------------t--c---ct-g-tttatcccag-ttcct----aa---aacca-at----------gtt----gc-aaa
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               330390 41 -   1826925 T-----G--A--------------------------C--CT--CG-G-TCCGTAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7427 43 +     19643 T-----G--A--------------------------CATCC--CT-G-TCCACCTGGG-CTCCT----GA---ACCCA-TT----------ATT----AC-AAA
i Loris_lydekkerianus.k141_2031736                       I 1 I 394
s Loris_tardigradus.ctg83                                  5041087 43 -   6120653 T-----G--A--------------------------CATCC--CT-G-TCCACCTGGG-CTCCT----GA---ACCCA-TT----------ATT----AC-AAA
i Loris_tardigradus.ctg83                                I 1 I 394
s Lycaon_pictus.CM007581.1                                41612444 42 +  59628241 t-----gaca--------------------------t--a---tt-g-tttatctcag-ttcct----aa---agcca-tt----------gtt----gc-aaa
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42707 41 -     61512 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370368 41 -  60120075 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22623 41 +     30207 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19726 41 -     24934 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22575 41 +     30527 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33765 41 -     50087 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43536 41 +     51645 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412704 41 - 187317192 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396927 41 +  25927173 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46091 41 -     62418 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22746 41 +     24253 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42567 41 +     59329 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268500 41 +    668171 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19681 41 +     21031 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  278 41 +     17132 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221005 42 -    270270 t-----gaca--------------------------t--t---ct-g-ttcatcttag-cttct----ga---agcca-tc----------att----tc-aaa
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                        319778 41 +  24302211 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354610 41 -    752769 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671284 43 -    737560 t-----gaca--------------------------t--c---cc-tgtccatttcag-ttcct----ag---agcca-tt----------act----gc-aaa
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218575 43 +    317179 t-----gatg--------------------------t--c---cc-tgtccatttcag-ttcct----ag---agctg-tt----------agt----gc-aaa
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498739 15 +  40650429 -------------------------------------------ct-g-ccc-tctgtg-ttc------------------------------------------
i Marmota_marmota.CZRN01000018.1                         I 8 I 19
s Megaderma_lyra.MegLyr_scaffold_4542                       148194 42 +    207569 t-----gaca--------------------------t--t---ct-g-tccatctcag-ttcct----ga---agccg-tc----------att----gc-gaa
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23575 42 -     74585 t-----gaca--------------------------t--c---ct-g-tttatctcag-ttcct----aa---aggca-tt----------gtt----gc-aaa
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46426 19 -    140813 -------------------------------------------------------------------------------CCGAAGTTGTA-ACT----TC-AAG
i Meriones_unguiculatus.MerUng_scaffold_7390             I 26 C 0
s Mesocricetus_auratus.KB708134.1                         17426796 19 +  29670104 -------------------------------------------------------------------------------CTGAAGCCA-CAACT----GT-ATG
i Mesocricetus_auratus.KB708134.1                        I 5 C 0
s Mico_argentatus.k141_582562                                 7661 36 +     17804 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----------
i Mico_argentatus.k141_582562                            C 0 I 1
s Mico_humeralifer.k141_1180625                               8445 36 -     12984 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----------
i Mico_humeralifer.k141_1180625                          C 0 I 1
s Mico_schneideri.k141_1877700                                     16396 36 -     26561 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----------
i Mico_schneideri.k141_1877700                                 C 0 I 1
s Microcebus_murinus.CM007674.1                           74982351 43 +  93316391 T-----G--A--------------------------CAACA--GT-G-TCCATCTAGG-CTCCT----GA---ACCCA-TT----------ATT----GT-AAA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41707 39 +    145209 ---------A--------------------------T--C--CTT-G-TCCAGGACCA-TTCCT----GACATTG----GT----------ATT----GC-AAA
i Microgale_talazaci.MicTal_scaffold_6613                I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182418 42 +    200668 t-----gacg--------------------------t--t---ct-a-ttcatctcag-ttcct----aa---agcta-tc----------att----gc-aaa
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19805 41 -     27822 T-----G--A--------------------------C--CT--TG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TA----------ATT----AC-GAA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6066 42 +     27589 t-----gaca--------------------------t--c---ct-g-tttatcccag-ttcct----aa---aacca-at----------gtt----gc-aaa
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50146 43 -     62432 t-----g--a--------------------------caact--gt-g-tccatctagg-ctcct----ga---accca-tt----------att----gt-aaa
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176597 42 +    366855 T-----GACA--------------------------C--T---CT-A-TTCATCTCAG-TTCCT----AA---AGCCA-TC----------ATT----GT-AAA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15924 42 -     63510 T-----AGCA--------------------------T--C---CT-T-TTTATCTCAG-TTCCT----AA---AGcca-tt----------gtt----gc-aaa
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36451 42 +     47283 t-----gaca--------------------------t--t---ct-g-cccatctcag-tttct----aa---agcca-tc----------att----gc-aaa
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    193 20 +      5579 -------------------------------------------------------------------------------CCAAAGCCATA-ACT----GCCAGG
i Mus_caroli.FMAL02030609.1                              I 26 C 0
s Mus_musculus.chr8                                       41682147 20 + 129401213 -------------------------------------------------------------------------------CTGAAGCCATA-ACT----GCCAGG
i Mus_musculus.chr8                                      I 26 C 0
s Mus_spretus.CM004101.1                                  39489760 20 + 130317789 -------------------------------------------------------------------------------CTGAAGCCATA-ACT----GCTAGG
i Mus_spretus.CM004101.1                                 I 26 C 0
s Mustela_putorius.JH418006.1                             14352519 42 +  14710649 t-----gaca--------------------------t--c---ct-g-tttatctcag-ttcct----aa---aggca-tt----------gtt----tc-aaa
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790467 42 +  10118263 t-----gaca--------------------------t--t---ct-g-tccatctcag-tttct----aa---agcca-tc----------act----gc-aaa
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4384872 42 +   6019432 t-----gaca--------------------------t--t---ct-g-tccatctcag-tttct----aa---agcca-tc----------att----gc-aaa
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380688 42 +   4330536 t-----gaca--------------------------t--t---ct-g-tccatctcgg-tttct----aa---agcca-tc----------att----gc-aaa
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117326 43 +    130748 t-----gacc--------------------------t--t--cct-a-ttgatctcag-ttctt----ga---aacca-tt----------att----gc-agt
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26386 41 +     34575 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466453 42 -  31847680 t-----gaca--------------------------t--c---ct-g-tttatctcag-ttcct----aa---aacca-at----------gtt----gc-aaa
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125244 32 -    149072 t-----gaca--------------------------t--t---ct-a-t-----------tcct----aa---agcta-tc----------att----gc-aaa
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51129 40 -    132029 T-----G--A--------------------------C--CT--CT-G-TCCATAGAAA-TTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7224 40 -     16345 T-----G--A--------------------------C--CT--CT-G-TCCATAGAAA-TTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13109 40 +     22201 T-----G--A--------------------------C--CT--CT-G-TCCATAGAAA-TTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411393 40 -  22158432 T-----G--A--------------------------C--CT--CT-G-TCCATAGAAA-TTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23507 40 -     54323 T-----G--A--------------------------C--CT--CT-G-TCCATAGAAA-TTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196044 42 +   9404916 t-----gaca--------------------------t--a---tt-g-tttatctcag-ttcct----aa---agcca-tt----------gtt----gc-aaa
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93632718 43 + 196305487 T-----G--A--------------------------CATCC--CT-G-TCCATCTGGG-CTCCT----GA---ACCCA-TT----------ATT----AC-AAA
i Nycticebus_bengalensis.LG01                            I 1 I 1070
s Nycticebus_coucang.k141_8166032                             2107 43 +      2758 T-----G--A--------------------------CATCC--CT-G-TCCATCTGGG-CTCCT----GA---ACCCA-TT----------ATT----AC-AAA
i Nycticebus_coucang.k141_8166032                        I 4 n 221
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93560972 43 - 199412804 T-----G--A--------------------------CATCC--CT-G-TCCATCTGGG-CTCCT----GA---ACCCA-TT----------ATT----AC-AAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 I 1066
s Octodon_degus.JH651603.1                                11045053 17 -  11899542 -------------------------------------------ct-gtttcatctGTG-TTT------------------------------------------
i Octodon_degus.JH651603.1                               I 8 I 19
s Odobenus_rosmarus.KB229312.1                             1449241 42 +   2017862 t-----gaca--------------------------t--c---ct-g-tttatctcat-ttcct----aa---agcca-at----------gtt----gc-aaa
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90025 19 -    140218 -------------------------------------------------------------------------------CTGAAGCCA-CAATT----GC-AAG
i Ondatra_zibethicus.OndZib_scaffold_7387                I 11 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104865 19 +    107918 -------------------------------------------------------------------------------CTGAAGCCA-CAATT----GC-AAG
i Onychomys_torridus.OnyTor_scaffold_2487                I 13 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11118 43 -     14239 t-----gaca--------------------------t--c--cct-g-ttcatctcga-ttcct----aa---aacca-tt----------att----gc-aaa
i Orycteropus_afer.OryAfe_flattened_line_171931          I 2 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37084 42 +    559221 t-----gaca--------------------------t--a---tt-g-tttatctcag-ttcct----aa---agcca-tt----------gtt----gc-aaa
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        36558 42 -     51505 ------G--A--------------------------CATCC--CT-G-TCCATCTGGG-CTCCT----GA---ATCCA-TT----------CTT----AC-AAA
i Otolemur_crassicaudatus.k141_649260                    I 1 I 612
s Otolemur_garnettii.GL873799.1                             349572 43 +   1103335 T-----G--A--------------------------CATCC--CT-G-TCCATCTGGG-CTCCT----GA---ACCCA-TT----------CTT----AC-AAA
i Otolemur_garnettii.GL873799.1                          I 1 I 611
s Pan_troglodytes.CM009242.2                               1470217 40 - 189151597 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGG-TTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Pan_troglodytes.CM009242.2                             I 3 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22005 42 -    230217 t-----gaca--------------------------t--c---ct-t-tttatctcat-ttcct----aa---agcca-tt----------gtt----gc-ata
i Panthera_onca.PanOnc_flattened_line_3271               I 8 C 0
s Panthera_pardus.KV860321.1                              18459331 42 -  18783137 t-----gaca--------------------------t--c---ct-t-tttatctcat-ttcct----aa---agcca-tt----------gtt----gc-ata
i Panthera_pardus.KV860321.1                             I 8 C 0
s Panthera_tigris.KE722367.1                               3970051 42 +   8748460 t-----gaca--------------------------t--c---ct-t-tttatctcat-ttcct----aa---agcca-tt----------att----gc-ata
i Panthera_tigris.KE722367.1                             I 8 C 0
s Papio_anubis.CM001495.2                                   240618 41 - 183742232 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7082 41 +     21308 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288121 41 -  20919399 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19737 41 -     27687 T-----G--A--------------------------C--CT--CA-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12873 41 +     16796 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19683 41 -     23640 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12650 42 +     78924 t-----aaca--------------------------t--c---ct-t-tttatatcag-ttcct----aa---agcct-tt----------gct----gc-aaa
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          22813 47 +     31479 T-----G--A--------------------------CATCC--CT-A-TCCATCTAGG-CTCCT----GA---ACCCA-TT----------ATTTTGTAC-aaa
i Perodicticus_ibeanus.k141_1921260                      I 1 I 652
s Perodicticus_potto.k141_1854441                            15183 47 -     24908 T-----G--A--------------------------CATCC--CT-A-TCCATCTAGG-CTCCT----GA---ACCCA-TT----------ATTTTGTAC-AAA
i Perodicticus_potto.k141_1854441                        I 1 I 642
s Peromyscus_maniculatus.KI615324.1                         244510 19 +  18517816 -------------------------------------------------------------------------------CTGAAGCCA-CAATT----GC-AAG
i Peromyscus_maniculatus.KI615324.1                      I 13 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29757 10 -     56120 -------------------------------------------------------------------------------TT----------ATT----CC-AAA
i Petromus_typicus.PetTyp_scaffold_17301                 I 33 C 0
s Piliocolobus_badius.k141_2495623                            6537 41 +      7560 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62245 41 -     63152 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44844 41 +     45295 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2522 41 +      5735 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              626 42 +     22231 t-----gaca--------------------------t--t---ct-g-tccatctcag-tttct----aa---cgcca-ac----------att----gc-aaa
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62658 41 +    207309 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCTG-TT----------ATT----GC-AAA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3754 41 -     25401 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCTG-TT----------ATT----GC-AAA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29493 41 +     58159 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCTG-TT----------ATT----GC-AAA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29769 41 +     63561 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCTG-TT----------ATT----GC-AAA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29532 41 +     51148 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCTG-TT----------ATT----GC-AAA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554501 41 -   4542175 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCTG-TT----------ATT----GC-AAA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29516 41 +     51125 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCTG-TT----------ATT----GC-AAA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5946 41 +     39866 T-----G--G--------------------------C--CT--CT-G-TTCGTGGAGGCTTC-T----GA---ATCTA-CG----------ATT----AC-AAA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1031 41 -      9282 T-----G--G--------------------------C--CT--CT-G-TTCGTGGAGGCTTC-T----GA---ATCCA-CG----------ATT----AC-AAA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40435 41 -     87950 T-----G--G--------------------------C--CT--CT-G-TTCGTGGAGGCTTC-T----GA---ATCCA-CG----------ATT----AC-AAA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40828 41 -     88961 T-----G--G--------------------------C--CT--CT-G-TTCGTGGAGGCTTC-T----GA---ATCCA-CG----------ATT----AC-AAA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5527 41 -     39403 T-----G--G--------------------------C--CT--CT-G-TTCGTGGAGGCTTC-T----GA---ATCCA-CG----------ATT----AC-AAA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40481 41 +     87928 T-----G--G--------------------------C--CT--CT-G-TTCGTGGAGGCTTC-T----GA---ATCCA-CA----------ATT----AC-AAA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5524 41 -     60166 T-----G--G--------------------------C--CT--CT-G-TTCGTGGAGGCTTC-T----GA---ATCTA-CG----------ATT----AC-AAA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12460 41 -     67232 T-----G--G--------------------------C--CT--CT-G-TTCGTGGAGGCTTC-T----GA---ATCTA-CG----------ATT----AC-AAA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40376 41 -     90634 T-----G--G--------------------------C--CT--CT-G-TTCGTGGAGGCTTC-T----GA---ATCTA-CG----------ATT----AC-AAA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41844 41 +     89403 T-----G--G--------------------------C--CT--CT-G-TTCGTGGAGGCTTC-T----GA---ATCTA-CG----------ATT----AC-AAA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175357 40 - 189387572 T-----G--A--------------------------C--CT--TG-G-TCCATAGAGT-TTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190175 40 -   9816681 T-----G--A--------------------------C--CT--TG-G-TCCATAGAGT-TTC-T----GA---ATCCA-TT----------ATT----AC-AAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25019 41 +     69807 T-----G--A--------------------------C--CT--TG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42214 41 -     80239 t-----g--a--------------------------c--ct--tg-g-tccatagaggcttc-t----ga---atcca-tt----------att----ac-gaa
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563828 43 -   2598838 T-----G--A--------------------------CATCC--CT-G-TCCATCTGGG-TTCCT----GA---ACCCA-TT----------ATT----GT-AAA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1464 43 -      7103 t-----g--a--------------------------catcc--ct-g-tccatctggg-ttcct----ga---accca-tt----------att----gt-aaa
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2061 43 -     11706 t-----g--a--------------------------catcc--ct-g-tccatctggg-ttgct----ga---accca-tt----------att----gt-aaa
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5797 43 -     30655 t-----g--a--------------------------catcc--ct-g-tccatctggg-ttcct----ga---accca-tt----------att----gt-aaa
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32122 43 +     46564 t-----g--a--------------------------catcc--ct-g-tccatctggg-ttcct----ga---accca-tt----------att----gt-aaa
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92393 43 -     98465 t-----g--a--------------------------catcc--ct-g-tccatctggg-ttcct----ga---accca-tt----------att----gt-aaa
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6030 43 +     35169 t-----g--a--------------------------catcc--ct-g-tccatctgag-ttcct----ga---accca-tt----------att----gt-aaa
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            33962 19 +     52041 -------------------------------------------------------------------------------CTGAAGTTGTA-ACT----TC-AAG
i Psammomys_obesus.NESX01036366.1                        I 26 C 0
s Pteronotus_parnellii.KE847780.1                            49663 42 -     66298 t-----gaca--------------------------t--t---ct-a-ttcatctcag-ttcct----aa---agcca-tc----------att----gc-aaa
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2297 42 -     18639 t-----gaca--------------------------t--c---ct-g-tttatcttag-ttcct----aa---aggca-tt----------gtt----gc-aaa
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838633 42 -  28871421 t-----gaca--------------------------t--t---ct-g-ttcatcttag-cttct----ga---agcca-tc----------att----gc-aaa
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN525825.1                             3535199 42 -   4952924 t-----gaca--------------------------t--t---ct-g-ttcatcttag-cttct----ga---agcca-tc----------att----gc-aaa
i Pteropus_vampyrus.KN525825.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            18096652 42 +  38429054 t-----aaca--------------------------t--c---ct-t-tttatctcat-ttcct----aa---agtca-tt----------gtt----gc-ata
i Puma_concolor.QAVW01001104.1                           I 8 C 0
s Pygathrix_cinerea.k141_1153803                             24410 41 +     91421 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150903 41 -   7812017 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AT-GAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5280 41 +     72585 T-----G--A--------------------------C--CT--CG-G-TCCATAGAAGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020240 19 -  90668790 -------------------------------------------------------------------------------CTGAAGCCATA-GCT----GA-AGG
i Rattus_norvegicus.chr16                                I 26 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911288 42 +   3329780 t-----gaca--------------------------t--t---ct-g-tccatctcag-ttcct----ta---agcca-tc----------att----gc-aaa
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26239 41 +     27361 t-----g--a--------------------------c--ct--cg-g-tccatagaggcttc-t----ga---atcca-ct----------att----ac-gaa
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119587 41 + 195417433 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-CT----------ATT----AC-GAA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233847 41 -   7961872 t-----g--a--------------------------c--ct--cg-g-tccatagaggcttc-t----ga---atcca-ct----------att----ac-gaa
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72616 42 -    116970 t-----gaca--------------------------t--t---ct-g-tttatcttag-cttct----ga---agcca-tc----------att----gc-aaa
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 1
s Saguinus_bicolor.k141_1429097                               1614 41 +     27962 T-----G--C--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCG-TC----------ATT----AC-AAA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1622 41 +      6077 T-----G--C--------------------------C--CT--CT-G-TTCGTAGAGGCTTC-T----GA---ATCCG-TC----------ATT----AC-AAA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1641 41 +      5971 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCG-TC----------ATT----AC-AAA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1695 41 +      5932 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCG-TC----------ATT----AC-AAA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1840 41 -      2099 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCG-TC----------ATT----AC-AAA
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       388962 41 - 209938924 T-----G--C--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCG-TC----------ATT----AC-AAA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1643 41 +      5979 T-----G--A--------------------------C--CT--CT-G-TTCATAGAGGCTTC-T----GA---ATCCG-TC----------ATT----AC-AAA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2009 41 -      4301 T-----G--C--------------------------C--CT--CT-G-TTCGTAGAGGCTTC-T----GA---ATCCG-TC----------ATT----AC-AAA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236097 36 +   5703754 T-----G--A--------------------------C--CT--CT-G-TTCACAGAGGCTTC-T----GA---ATCCA-TT----------ATT----------
i Sapajus_apella.ctg103                                  C 0 I 1
s Sapajus_macrocephalus.k141_796559                           5687 36 +     21866 T-----G--A--------------------------C--CT--CT-G-TTCACAGAGGCTTC-T----GA---ATCCA-TT----------ATT----------
i Sapajus_macrocephalus.k141_796559                      C 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113823 42 +    313613 t-----gata--------------------------a--c---aa-g-cccatctcag-ttcct----aa---aatca-ta----------att----gc-aga
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22727 41 +     27374 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26246 41 +     58920 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12742 41 -     45317 T-----G--A--------------------------C--CT--CG-G-TCCGTAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20400 41 -     42441 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23080 41 -     29113 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26149 41 -     48123 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46064 19 +     77746 -------------------------------------------------------------------------------TTGAAGTCA-CAATG----GC-AAG
i Sigmodon_hispidus.SigHis_scaffold_20193                I 13 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856130 43 -   1910179 t-----gatg--------------------------c-cc---at-g-tccctctcct-tttct----ga---agcta-ta----------att----gc-aaa
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866131 10 +   3870691 -------------------------------------------------------------------------------TT----------ATT----GA-AAG
i Spermophilus_dauricus.KZ294078.1                       I 26 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4295 42 -     97271 t-----gaca--------------------------t--c---ct-g-tttatctcag-ttccc----aa---aggca-tt----------gtt----gc-aaa
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122335 42 +    196729 T-----AGCA--------------------------T--C---CT-T-ATTATCTCAG-TTCCT----AA---AGcca-tt----------gtt----gc-aaa
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388365 40 +   1523678 T-----G--A--------------------------C--CT--CT-G-TCCATAGAGG-TTC-T----GA---ATCCG-TT----------ATT----AC-AAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11440 42 +     22964 t-----gaca--------------------------t--t---ct-g-gccatctcag-tttct----aa---agcca-tc----------att----gc-aaa
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 444 43 +      5583 t-----gacc--------------------------t--t--cct-g-ttgatctaag-ttctt----ga---aaccg-tt----------att----gc-aat
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189163 43 +    199430 t-----gaca--------------------------t--c---tctg-tctgtctcag-ttcct----ga---agcca-tt----------gtt----gc-aaa
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103119 43 -    539355 t-----gaca--------------------------t--c---tctg-tctgtctcag-ttcct----ga---agtca-tt----------act----gc-aaa
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                           350604 41 - 186847797 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22062 16 -     33621 -------------------------------------------CT-G-TCCAGCTTTA-TTT------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 8 I 19
s Tolypeutes_matacus.TolMat_scaffold_31955                   17565 43 -     31044 t-----aacc--------------------------t--t--cct-a-tctatctccg-ttctt----ga---aacca-tt----------att----gc-aaa
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477480 42 -    610378 t-----gaca--------------------------t--t---ct-g-ttcatctcag-ttccc----ag---agcca-tc----------act----gc-aaa
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18291 41 +     26378 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----GC-GAA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     30975 41 -     78344 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17612 41 +     25722 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----GC-GAA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25837 41 -     62838 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25954 41 +     46913 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6762 41 -     28527 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----GC-GAA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27776 41 -     64340 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25813 41 -     63452 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7256 41 +     22490 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          684 41 -      6147 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7678 41 -     13050 t-----g--a--------------------------c--ct--cg-g-tccatggaggcttc-t----ga---atcca-tt----------att----ac-gaa
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252917 41 -   6242583 t-----g--a--------------------------c--ct--cg-g-tccatagaggcttc-t----ga---atcca-tt----------att----ac-gaa
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58648 41 +     59866 T-----G--A--------------------------C--CT--CG-G-TCCATAGAGGCTTC-T----GA---ATCCA-TT----------ATT----AC-GAA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831406 42 -   4065304 t-----gaca--------------------------t--c---ct-g-tgtatcTGGG-CTCTT----GA---AGCCT-TT----------ACC----GC-AAA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5922 42 -     70247 t-----gaca--------------------------t--c---ct-g-tgcatctaag-ctctt----ga---agcct-tt----------act----gc-aaa
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105050 41 -    105689 t-----gata--------------------------t--c---aa-a-ctca-ctcag-ttcct----aa---aacca-ca----------att----gc-aaa
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179646 42 +   5085361 t-----gaca--------------------------t--c---ct-g-tttatctcag-ttcct----aa---agcca-tt----------gtt----gc-aaa
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22886 39 -     30710 ------------------------------------TGTCC--CT-G-TCCATCTGGC-CTCCT----G----ACCCA-TT----------ATT----GT-AAA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21793 39 -    147434 ------------------------------------tgtcc--ct-g-tccatctggc-ctcct----g----accca-tt----------att----gt-aaa
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102808 42 -    112863 t-----gaca--------------------------t--a---tt-g-tttatctcag-ttcct----aa---agcca-tt----------gtt----gc-aaa
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171872 16 -    224448 -------------------------------------------tt-g-tccatctgtt-tcc------------------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     I 9 I 18
s Zalophus_californianus.ZalCal_flattened_line_17732         26461 42 -     86975 t-----gaca--------------------------t--c---ct-g-tttatctcat-ttcct----aa---agcca-at----------gtt----gc-aaa
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_211135                      1146 19 +      3117 -------------------------------------------------------------------------------CTGAAGCCATA-ATT----AC-AAG
i Zapus_hudsonius.ZapHud_scaffold_211135                 I 101 I 140
e Perognathus_longimembris.PerPac_flattened_line_28053       37455  0 +     38305 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254  0 -  37912305 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tarsius_wallacei.k141_226975                                4803  0 +     20590 C
e Tarsius_lariang.k141_1780720                                4764  0 +      6850 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cephalopachus_bancanus.k141_72622                           1244  0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Carlito_syrichta.NW_007259797.1                           268072  0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2904 3 +     36723 C----AA
s Acinonyx_jubatus.LLWD01001279.1                           810431 3 +   1699592 t----aa
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413168 3 +  29979442 c----aa
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15832 3 -     61208 A----AA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45318 3 +     53615 c----ta
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41239 3 +     44087 C----TA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13879 3 -     21945 C----TA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15555 3 +     32033 C----TA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_caraya.k141_1109140                               42241 3 -     78289 C----AA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_juara.k141_1687208                                40129 3 -     64179 C----AA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21775 3 -     24835 C----AA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38758 3 +     45454 C----AA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44456 3 +     70886 C----AA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6581 3 +     30854 C----AA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30720 3 +     42133 C----AA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174490 3 -    412891 c----aa
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48535 3 -     65372 C----AA
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42282 3 +     43593 C----AA
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670295 3 +   5030052 C----AA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21937 3 -     23494 C----AA
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7073 3 +      8415 C----AA
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13833 3 -     32367 a----aa
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18081 3 -     45910 c----aa
i Arctocebus_calabarensis.k141_1364444                   I 644 I 56
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2774 3 -     15198 c----aa
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272519 3 +  21539123 C----AA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8686 3 +     48076 C----AA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3823 3 -     28759 C----AA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31376 3 +     44353 C----AA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46747 3 -     71267 C----AA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20806 3 -     33135 C----AA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3992 3 +     11645 c----aa
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3993 3 -     19611 c----aa
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5709 3 +     28062 C----AA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41003 3 -     91139 C----AA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18529 3 +     95584 C----AA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18442 3 +    119600 C----AA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7926 3 +     18648 C----AA
i Callibella_humilis.k141_1233062                        I 1 C 0
s Callimico_goeldii.k141_1609886                              7589 3 -     13885 C----AA
i Callimico_goeldii.k141_1609886                         I 1 C 0
s Callithrix_geoffroyi.k119_473390                           16287 3 +     17162 C----AA
i Callithrix_geoffroyi.k119_473390                       I 1 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451242 3 + 189096842 C----AA
i Callithrix_jacchus.pat_scaffold_3                      I 1 C 0
s Callithrix_kuhlii.k119_404482                              17535 3 -     18408 C----AA
i Callithrix_kuhlii.k119_404482                          I 1 C 0
s CanFam4.chr16                                           42503217 3 +  60362399 c----aa
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6853 3 -     23171 c----aa
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220196 3 +   9314153 C----AA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613331 3 +  59632846 c----aa
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104912 3 -  63665305 c----aa
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2846 3 +      5315 c----aa
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993759 3 +  23392119 t----aa
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997201 3 +  23407841 t----aa
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60302 3 -     66877 T----AA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2821 3 -     12580 C----AA
i Cebuella_niveiventris.k141_592277                      I 1 C 0
s Cebuella_pygmaea.k141_145798                               40707 3 +     53515 C----AA
i Cebuella_pygmaea.k141_145798                           I 1 C 0
s Cebus_albifrons.Contig27                                  368914 3 -  26074798 C----AA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5803 3 -     34880 C----AA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64898 3 -     89041 C----AA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489953 3 -  27778364 c----aa
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16786 3 +     27315 c----aa
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138478 3 -   4669795 C----TA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42218 3 +     47900 C----TA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42051 3 -     44860 C----TA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42034 3 -    148725 C----TA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25132 3 -     40656 C----TA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5101 3 +     20796 C----TA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9291 3 -     17524 C----TA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25013 3 -     34525 C----TA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9722 3 -     25376 C----TA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362321 3 -  39242232 C----TA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268029 3 +  21565898 C----TA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29490 3 -     45857 C----TA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25310 3 -     32606 C----TA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1463 3 +      8499 C----TA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22982 3 +     70610 C----TA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19907 3 +     36323 C----TA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10600 3 -     19938 c----ga
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28426 3 -     33796 C----AA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2956 3 -     15404 c----aa
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6817 3 -     32913 C----AA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17230 3 -     40346 C----AA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17485 3 +    216457 C----AA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17278 3 +     39636 C----AA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1657 3 +      5346 C----GG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40349 3 -    112038 C----AA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5921 3 +     34062 C----AA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340804 3 +  18827391 C----TA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7349 3 -     44032 C----TA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302129 3 - 135778131 C----TA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406583 3 -   2368649 C----TA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376459 3 - 200372422 c----ta
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                  8 3 -     84244 C----TA
i Colobus_polykomos.k141_906115                          N 0 C 0
s Condylura_cristata.JH655891.1                           35805077 3 +  53390261 c----aa
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           532 7 -      8242 aaaaaaa
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_14425                 40109 3 -     83289 A----CA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112302 3 - 224834208 A----AA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1707 3 +     87169 t----ac
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642646 3 -   1526836 T----AA
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 10 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2741 3 +     50838 T----AA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 19 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1384 3 +     36344 T----AA
i Cuniculus_paca.CunPac_flattened_line_7025              I 19 C 0
s Dasypus_novemcinctus.JH564415.1                          2107931 3 -   2246927 t----ga
i Dasypus_novemcinctus.JH564415.1                        I 3 C 0
s Daubentonia_madagascariensis.ctg71                        290373 3 +  12879189 c----ga
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862511 3 -  20541912 c----aa
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662245 3 -   1390856 c----aa
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137030 3 -    198055 c----aa
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96115 3 -    115145 T----AA
i Dinomys_branickii.DinBra_scaffold_10381                I 19 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7705 3 +     14636 t----aa
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851453 4 - 111700974 t---taa
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105095 3 -  10337057 a----aa
i Elephantulus_edwardii.JH947257.1                       I 5 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28316 3 +    110024 A----AA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10280 3 +     18970 A----AA
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913748 3 +  41312741 c----aa
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576145 3 +  14770903 g----aa
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039226 3 -   4378816 c----aa
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373160 3 +  39960074 c----aa
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409946 3 -    498745 c----aa
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260327 3 +  21539334 C----TA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186244337 3 - 206538554 t----aa
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114123 3 - 205367284 t----aa
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25226 3 -     30238 t----aa
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122091 3 -    137831 c----aa
i Galago_moholi.ctg3793                                  I 616 I 55
s Galago_senegalensis.k141_991736                             5631 3 +     22493 c----aa
i Galago_senegalensis.k141_991736                        I 615 I 55
s Galagoides_demidoff.k141_561628                            17673 3 -     32986 c----aa
i Galagoides_demidoff.k141_561628                        I 601 T 604
s Galeopterus_variegatus.GalVar_scaffold_74466               16843 3 +     18121 c----ac
i Galeopterus_variegatus.GalVar_scaffold_74466           I 43 C 0
s Gorilla_beringei.k141_3358147                               3241 3 -      8343 C----AA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252252 3 - 186649187 c----aa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28211 3 -    327341 t----aa
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1924813 3 -  22651954 t----aa
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547982 3 -   1711038 c----aa
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_23202               47298 3 +     49977 c----aa
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 2
s Hoolock_leuconedys.ctg274                                    140245 3 -    630532 C----AA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66694 3 +     83186 T----GA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69055 3 +    143317 T----AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 19 C 0
s Hylobates_agilis.k141_1155965                               3280 3 +     12352 C----AA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10463 3 +     55766 C----AA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050059 3 + 191637585 C----AA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798937 3 +  11177569 C----AA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384572 3 +   7955117 T----AA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                    1498 3 -      1527 C----AG
i Indri_indri.k141_4600452                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1236991 3 +   9596543 a----aa
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41062 3 +    110728 C----AA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59622 3 -     65777 g----aa
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1742 3 -     13097 C----AG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1693 3 +      5940 C----AG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1324 3 -      5717 C----AG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6782 3 +     29618 C----GA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6779 3 +     31569 C----GA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6789 3 +     24756 c----ga
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6783 3 +     16388 C----GA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811098 3 -   3914936 c----aa
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               330431 3 -   1826925 C----TA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7864 3 +     19643 c----aa
i Loris_lydekkerianus.k141_2031736                       I 394 I 55
s Loris_tardigradus.ctg83                                  5041524 3 -   6120653 c----aa
i Loris_tardigradus.ctg83                                I 394 I 55
s Lycaon_pictus.CM007581.1                                41612486 3 +  59628241 c----aa
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42748 3 -     61512 C----TA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370409 3 -  60120075 C----TA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22664 3 +     30207 C----TA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19767 3 -     24934 C----TA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22616 3 +     30527 C----TA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33806 3 -     50087 C----TA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43577 3 +     51645 C----TA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412745 3 - 187317192 C----TA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396968 3 +  25927173 C----TA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46132 3 -     62418 C----TA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22787 3 +     24253 C----TA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42608 3 +     59329 C----TA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268541 3 +    668171 C----TA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19722 3 +     21031 C----TA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  319 3 +     17132 C----TA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319819 3 +  24302211 C----TA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354651 3 -    752769 C----TA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671327 3 -    737560 c----aa
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218618 3 +    317179 c----aa
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498773 3 +  40650429 t----aa
i Marmota_marmota.CZRN01000018.1                         I 19 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148236 3 +    207569 c----aa
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_19308             23617 3 -     74585 c----aa
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46445 3 -    140813 A----AA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17426815 3 +  29670104 A----AA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 7698 3 +     17804 C----AA
i Mico_argentatus.k141_582562                            I 1 C 0
s Mico_humeralifer.k141_1180625                               8482 3 -     12984 C----AA
i Mico_humeralifer.k141_1180625                          I 1 C 0
s Mico_schneideri.k141_1877700                                     16433 3 -     26561 C----AA
i Mico_schneideri.k141_1877700                                 I 1 C 0
s Microcebus_murinus.CM007674.1                           74982394 4 +  93316391 C---TAA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41746 4 +    145209 T---GAA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182460 3 +    200668 c----aa
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19846 3 -     27822 C----TA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6108 3 +     27589 c----aa
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50189 4 -     62432 c---taa
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176639 3 +    366855 C----AA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15966 3 -     63510 t----aa
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36493 3 +     47283 g----aa
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    213 3 +      5579 A----AA
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41682167 3 + 129401213 A----AA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39489780 3 + 130317789 A----AA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                             14352561 3 +  14710649 c----aa
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790509 3 +  10118263 g----aa
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4384914 3 +   6019432 g----aa
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380730 3 +   4330536 g----aa
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117369 3 +    130748 c----aa
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26427 3 +     34575 C----TA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466495 3 -  31847680 c----aa
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125276 3 -    149072 c----aa
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51169 3 -    132029 C----AA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7264 3 -     16345 C----AA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13149 3 +     22201 C----AA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411433 3 -  22158432 C----AA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23547 3 -     54323 C----AA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196086 3 +   9404916 c----aa
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93633831 3 + 196305487 c----aa
i Nycticebus_bengalensis.LG01                            I 1070 I 56
s Nycticebus_coucang.k141_3846325                              589 3 -      3937 c----aa
i Nycticebus_coucang.k141_3846325                        I 221 I 56
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562081 3 - 199412804 c----aa
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1066 I 56
s Octodon_degus.JH651603.1                                11045089 3 -  11899542 T----AA
i Octodon_degus.JH651603.1                               I 19 C 0
s Odobenus_rosmarus.KB229312.1                             1449283 3 +   2017862 c----ga
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90044 3 -    140218 A----AA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104884 3 +    107918 A----AA
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11161 3 -     14239 t----aa
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37126 3 +    559221 c----aa
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37212 3 -     51505 c----aa
i Otolemur_crassicaudatus.k141_649260                    I 612 I 55
s Otolemur_garnettii.GL873799.1                             350226 3 +   1103335 c----aa
i Otolemur_garnettii.GL873799.1                          I 611 I 55
s Pan_troglodytes.CM009242.2                               1470257 3 - 189151597 C----AA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22047 3 -    230217 t----aa
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459373 3 -  18783137 t----aa
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970093 3 +   8748460 t----aa
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240659 3 - 183742232 C----TA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7123 3 +     21308 C----TA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288162 3 -  20919399 C----TA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19778 3 -     27687 C----TA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12914 3 +     16796 C----TA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19724 3 -     23640 C----TA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12692 3 +     78924 t----aa
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23512 3 +     31479 c----aa
i Perodicticus_ibeanus.k141_1921260                      I 652 I 56
s Perodicticus_potto.k141_1854441                            15872 3 -     24908 c----aa
i Perodicticus_potto.k141_1854441                        I 642 I 56
s Peromyscus_maniculatus.KI615324.1                         244529 3 +  18517816 A----AA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29767 3 -     56120 A----AA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6578 3 +      7560 C----TA
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62286 3 -     63152 C----TA
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44885 3 +     45295 C----TA
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2563 3 +      5735 C----Ta
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              668 3 +     22231 a----aa
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62699 3 +    207309 C----GA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3795 3 -     25401 C----GA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29534 3 +     58159 C----GA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29810 3 +     63561 C----GA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29573 3 +     51148 C----GA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554542 3 -   4542175 C----GA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29557 3 +     51125 C----GA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5987 3 +     39866 C----AA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1072 3 -      9282 C----AA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40476 3 -     87950 C----AA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40869 3 -     88961 C----AA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5568 3 -     39403 C----AA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40522 3 +     87928 C----AA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5565 3 -     60166 C----AA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12501 3 -     67232 C----AA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40417 3 -     90634 C----AA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41885 3 +     89403 C----AA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175397 3 - 189387572 C----AA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190215 3 -   9816681 C----AA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25060 3 +     69807 C----TA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42255 3 -     80239 c----ta
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563871 3 -   2598838 C----AA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1507 3 -      7103 c----aa
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2104 3 -     11706 c----aa
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5840 3 -     30655 c----aa
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32165 3 +     46564 c----aa
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92436 3 -     98465 c----aa
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6073 3 +     35169 c----aa
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            33981 3 +     52041 A----AA
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49705 3 -     66298 c----aa
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2339 3 -     18639 c----aa
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096694 3 +  38429054 t----aa
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24451 3 +     91421 C----TA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150944 3 -   7812017 C----TA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5321 3 +     72585 C----TA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020259 3 -  90668790 A----AA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911330 3 +   3329780 t----aa
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 2
s Rhinopithecus_bieti.k119_221883                            26280 3 +     27361 c----ta
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119628 3 + 195417433 C----TA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233888 3 -   7961872 c----ta
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               1655 3 +     27962 C----GG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1663 3 +      6077 C----GG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1682 3 +      5971 C----GG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1736 3 +      5932 C----GG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1881 3 -      2099 C----GG
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       389003 3 - 209938924 C----GG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1684 3 +      5979 C----GG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2050 3 -      4301 C----GG
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236134 3 +   5703754 C----AA
i Sapajus_apella.ctg103                                  I 1 C 0
s Sapajus_macrocephalus.k141_796559                           5724 3 +     21866 C----AA
i Sapajus_macrocephalus.k141_796559                      I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113865 3 +    313613 c----aa
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22768 3 +     27374 C----TA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26287 3 +     58920 C----TA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12783 3 -     45317 C----TA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20441 3 -     42441 C----TA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23121 3 -     29113 C----TA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26190 3 -     48123 C----TA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46083 3 +     77746 A----AA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856173 3 -   1910179 t----aa
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866141 3 +   3870691 T----AA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4337 3 -     97271 c----aa
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122377 3 +    196729 t----aa
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388405 3 +   1523678 C----AA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11482 3 +     22964 c----aa
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 487 3 +      5583 c----aa
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189206 3 +    199430 c----aa
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103162 3 -    539355 c----aa
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                           350645 3 - 186847797 C----TA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22097 3 -     33621 A----AG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 19 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17608 3 -     31044 t----ga
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477522 3 -    610378 c----aa
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18332 3 +     26378 C----TA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31016 3 -     78344 C----TA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17653 3 +     25722 C----TA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25878 3 -     62838 C----TA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25995 3 +     46913 C----TA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6803 3 -     28527 C----TA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27817 3 -     64340 C----TA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25854 3 -     63452 C----TA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7297 3 +     22490 C----TA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          725 3 -      6147 C----TA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7719 3 -     13050 c----ta
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252958 3 -   6242583 c----ta
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58689 3 +     59866 C----TA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831448 3 -   4065304 C----AA
i Tupaia_chinensis.KB320699.1                            C 0 I 6
s Tupaia_tana.TupTan_flattened_line_394                       5964 3 -     70247 a----aa
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105091 3 -    105689 t----aa
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179688 3 +   5085361 c----ag
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22925 3 -     30710 C----AA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21832 3 -    147434 c----aa
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102850 3 -    112863 c----aa
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171906 3 -    224448 t----aa
i Xerus_inauris.XerIna_scaffold_2302                     I 18 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26503 3 -     86975 c----ga
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1154 3 +      2695 A----AA
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 43 C 0
e Perognathus_longimembris.PerPac_flattened_line_28053       37455 0 +     38305 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254 0 -  37912305 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tarsius_wallacei.k141_226975                                4803 0 +     20590 C
e Tarsius_lariang.k141_1780720                                4764 0 +      6850 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72658 1 -    116970 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Pteropus_vampyrus.KN525825.1                             3535241 1 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838675 1 -  28871421 I
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754 5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                221047 1 -    270270 I
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Leontopithecus_rosalia.k141_349454                          9324 0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     7943 0 -     11567 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               4081 1 +     19438 I
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cephalopachus_bancanus.k141_72622                           1244 0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Carlito_syrichta.NW_007259797.1                           268072 0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Alouatta_discolor.k141_2561099                             41691 0 +     55831 C
e Alouatta_belzebul.k141_1011583                             70012 0 -     84148 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2907 11 +     36723 AGAATA-C-A-ACT
s Acinonyx_jubatus.LLWD01001279.1                           810434  9 +   1699592 ggttta-t-a-a--
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413171  9 +  29979442 agtgtg-t-a-a--
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15835  4 -     61208 AGGA----------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 7
s Allenopithecus_nigroviridis.k141_3755588                   45321 11 +     53615 agaata-c-a-act
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41242 11 +     44087 AGAATA-C-A-ACT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13882 11 -     21945 AGAATA-C-A-ACT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15558 11 +     32033 AGAATA-C-A-ACT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70012 10 -     84148 -GAATG-C-A-GCT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42244 11 -     78289 AGAATG-C-A-GCT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41691 10 +     55831 -GAATG-C-A-GCT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40132 11 -     64179 AGAATG-C-A-GCT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21778 11 -     24835 AGAATG-C-A-GCT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38761 11 +     45454 AGAATG-C-A-GCT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44459 11 +     70886 AGAATG-C-A-GCT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6584 11 +     30854 AGAATG-C-A-GCT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30723 11 +     42133 AGAATG-C-A-GCT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174493  9 -    412891 gatatg-c-t-t--
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48538 11 -     65372 AGAATG-C-A-GCT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42285 11 +     43593 AGAATG-C-A-GCT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670298 11 +   5030052 AGAATG-C-A-GCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21940 11 -     23494 AGAATG-C-A-GCT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7076 11 +      8415 AGAATG-C-A-GCT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13836 11 -     32367 gcaatg-c-a-ttt
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 1
s Arctocebus_calabarensis.k141_1364444                       18140 11 -     45910 AGACTA-C-A-ACT
i Arctocebus_calabarensis.k141_1364444                   I 56 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2777  9 -     15198 gagacg-a-t-t--
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272522 11 +  21539123 AGAATG-C-A-GCT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8689 11 +     48076 AGAATG-C-A-GCT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3826 11 -     28759 AGAATG-C-A-GCT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31379 11 +     44353 AGAATG-C-A-GCT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46750 11 -     71267 AGAATG-C-A-GCT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20809 11 -     33135 AGAATG-C-A-GCT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  3995 11 +     11645 agacta-c-a-act
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               3996 11 -     19611 agacta-c-a-act
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5712 11 +     28062 AGAATG-C-A-GCT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41006 11 -     91139 AGAATG-C-A-GCT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18532 11 +     95584 AGAATG-C-A-GCT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18445 11 +    119600 AGAATG-C-A-GCT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7929 11 +     18648 AGAACG-C-A-GCT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7592 11 -     13885 AGAACG-C-A-GCT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16290 11 +     17162 AGAACG-C-A-GCT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451245 11 + 189096842 AGAACG-C-A-GCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17538 11 -     18408 AGAACG-C-A-GCT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503220  9 +  60362399 agtgta-t-a-a--
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6856  9 -     23171 agtgta-t-a-a--
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220199  9 +   9314153 AGtgta-t-a-a--
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613334  9 +  59632846 agtgta-t-a-a--
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104915  9 -  63665305 agtgta-t-a-a--
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268072  2 +    496798 ------------CT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2849  9 +      5315 gatacg-a-t-t--
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993762 11 +  23392119 aggaca-c-a-aat
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997204 11 +  23407841 aggaca-c-a-aat
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60305 11 -     66877 AGGACA-C-A-AAT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2824 11 -     12580 AGAACG-C-A-GCT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40710 11 +     53515 AGAACG-C-A-GCT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368917 11 -  26074798 AGAACG-C-A-GCT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5806 11 -     34880 AGAACG-C-A-GCT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64901 11 -     89041 AGAACG-C-A-GCT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1244  2 -      1636 ------------CT
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489956  9 -  27778364 aggata-t-a-a--
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16789  9 +     27315 aggata-t-a-a--
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138481 11 -   4669795 AGAATA-C-A-ACT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42221 11 +     47900 AGAATA-C-A-ACT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42054 11 -     44860 AGAATA-C-A-ACT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42037 11 -    148725 AGAATA-C-A-ACT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25135 11 -     40656 ATAATA-C-A-ACT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5104 11 +     20796 AGAATA-C-A-ACT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9294 11 -     17524 AGAATA-C-A-ACT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25016 11 -     34525 AGAATA-C-A-ACT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9725 11 -     25376 AGAATA-C-A-ACT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362324 11 -  39242232 AGAATA-C-A-ACT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268032 11 +  21565898 AGAATA-C-A-ACT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29493 11 -     45857 AGAATA-C-A-ACT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25313 11 -     32606 AGAATA-C-A-ACT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1466 11 +      8499 AGAATA-C-A-ACT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22985 11 +     70610 AGAATA-C-A-ACT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19910 11 +     36323 AGAATA-C-A-ACT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10603 11 -     19938 agga-t-aca-act
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28429 11 -     33796 AGACTA-A-A-ACT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2959 11 -     15404 agacta-a-a-act
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6820 11 -     32913 AGAACG-C-A-GCT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17233 11 -     40346 AGAACG-C-A-GCT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17488 11 +    216457 AGAACG-C-A-GCT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17281 11 +     39636 AGAACG-C-A-GCT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1660 11 +      5346 AGAACG-C-A-GCG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40352 11 -    112038 AGAATG-C-A-GCT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5924 11 +     34062 AGAATG-T-A-GCT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340807 11 +  18827391 AGAATA-C-A-ACT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7352 11 -     44032 AGAATA-C-A-GCT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302132 11 - 135778131 AGAATA-C-A-ACT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406586 11 -   2368649 Agaata-c-a-att
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376462 11 - 200372422 agaata-c-a-att
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                 11 11 -     84244 AGAATA-C-A-ATT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805080  4 +  53390261 aaga----------
i Condylura_cristata.JH655891.1                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           541  9 -      8242 aataaa-a-t-t--
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40112 11 -     83289 ATAATG-C-A-AGT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112305 11 - 224834208 ATAACT-C-A-AGG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1710  9 +     87169 ggttta-t-a-a--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642649 11 -   1526836 AGGACG-C-G-ACA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2744 11 +     50838 AAGATA-C-A-ACT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1387 11 +     36344 AGGATA-C-A-ACT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2107934 11 -   2246927 agaa-c-aca-act
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290376 10 +  12879189 ggacta-c-a-ac-
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Desmodus_rotundus.KZ672289.1                            11862514  9 -  20541912 gataca-a-c-t--
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662248  9 -   1390856 aggata-t-a-a--
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137033  9 -    198055 aggata-t-a-a--
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96118 12 -    115145 AGGATA-C-AAACT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7708 11 +     14636 aggata-t-a-aat
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851457 10 - 111700974 gggt-a-c-a-cat
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4082  9 +     19438 ggttaa-a-t-t--
i Eidolon_helvum.AWHC01266696.1                          I 1 C 0
s Elephantulus_edwardii.JH947257.1                         9105098 10 -  10337057 agat-t-t-a-aat
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28319 11 +    110024 CTAACT-C-A-AGG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10283 11 +     18970 ATAACT-C-A-AGG
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913751  9 +  41312741 agtgta-t-a-a--
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576148  9 +  14770903 gataca-a-t-t--
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039229  9 -   4378816 aagaga-c-a-a--
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373163  9 +  39960074 aagaga-c-a-a--
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409949  9 -    498745 aagaga-c-a-a--
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260330 11 +  21539334 AGAATA-C-A-ACT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186244340  9 - 206538554 ggttta-t-c-a--
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114126  9 - 205367284 ggttta-t-c-a--
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25229  9 -     30238 ggttta-t-a-a--
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122149 11 -    137831 AGACTA-C-A-ACT
i Galago_moholi.ctg3793                                  I 55 C 0
s Galago_senegalensis.k141_991736                             5689 11 +     22493 AGACTA-C-A-ACT
i Galago_senegalensis.k141_991736                        I 55 C 0
s Galagoides_demidoff.k141_561628                            17072 10 -     32986 -GACTA-C-A-GCT
i Galagoides_demidoff.k141_561628                        T 604 I 660
s Galeopterus_variegatus.GalVar_scaffold_74466               16846 11 +     18121 agaata-c-a-act
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               3244 11 -      8343 AGAATA-C-A-ACT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252255 11 - 186649187 agaata-c-a-act
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28214  9 -    327341 ggatta-t-a-a--
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1924816 11 -  22651954 aggata-c-a-act
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1547987  9 -   1711038 agtaaa-a-t-t--
i Hipposideros_armiger.JXIK01000431.1                    I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47303  9 +     49977 agtaaa-a-t-t--
i Hipposideros_galeritus.HipGal_scaffold_23202           I 2 C 0
s Hoolock_leuconedys.ctg274                                    140248 11 -    630532 AGAATA-C-A-ACT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66697  9 +     83186 GGTTTA-T-A-A--
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69058 11 +    143317 AGGATA-A-A-AAC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3283 11 +     12352 AGAATA-C-A-ACT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10466 11 +     55766 AGAATA-C-A-ACT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050062 11 + 191637585 AGAATA-C-A-ACT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798940 11 +  11177569 AGAATA-C-A-ACT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384575 11 +   7955117 GTGACC-C-A-ACT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_4600452                                    1501 11 -      1527 AAACTA-C-A-ACT
i Indri_indri.k141_4600452                               C 0 N 0
s Jaculus_jaculus.JH725527.1                               1236994  4 +   9596543 ggga----------
i Jaculus_jaculus.JH725527.1                             C 0 I 7
s Lagothrix_lagothricha.k141_246028                          41065 11 +    110728 AGAGTG-C-A-GCT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59625  9 -     65777 gataca-a-t-t--
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1745 11 -     13097 AGAACG-C-A-GCG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1696 11 +      5940 AGAACG-C-A-GCG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1327 11 -      5717 AGAACG-C-A-GCG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7943  7 -     11567 ----CG-C-A-GCT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9324  7 -     12945 ----CG-C-A-GCT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6785 11 +     29618 AGACTA-C-A-ACT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6782 11 +     31569 AGACTA-C-A-ACT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6792 11 +     24756 agacta-c-a-act
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6786 10 +     16388 AGACTA-C-A-AC-
i Lepilemur_septentrionalis.k141_360456                  C 0 I 1
s Leptonychotes_weddellii.KB714746.1                        811101  9 -   3914936 agtgta-t-a-a--
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               330434 11 -   1826925 AGAATA-C-G-ACT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7922 11 +     19643 ACACTA-C-A-ACT
i Loris_lydekkerianus.k141_2031736                       I 55 C 0
s Loris_tardigradus.ctg83                                  5041582 11 -   6120653 AGACTA-C-A-ACT
i Loris_tardigradus.ctg83                                I 55 C 0
s Lycaon_pictus.CM007581.1                                41612489  9 +  59628241 agtgta-t-a-a--
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42751 11 -     61512 AGAATA-C-A-ACT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370412 11 -  60120075 AGAATA-C-A-ACT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22667 11 +     30207 AGAATA-C-A-ACT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19770 11 -     24934 AGAATA-C-A-ACT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22619 11 +     30527 AGAATA-C-A-ACT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33809 11 -     50087 AGAATA-C-A-ACT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43580 11 +     51645 AGAATA-C-A-ACT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412748 11 - 187317192 AGAATA-C-A-ACT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396971 11 +  25927173 AGAATA-C-A-ACT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46135 11 -     62418 AGAATA-C-A-ACT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22790 11 +     24253 AGAATA-C-A-ACT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42611 11 +     59329 AGAATA-C-A-ACT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268544 11 +    668171 AGAATA-C-A-ACT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19725 11 +     21031 AGAATA-C-A-ACT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  322 11 +     17132 AGAATA-C-A-ACT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221048  9 -    270270 gattaa-a-g-t--
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                        319822 11 +  24302211 AGAATA-C-A-ACT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354654 11 -    752769 AGAATA-C-A-ACT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671330  9 -    737560 aggata-c-a-a--
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218621  9 +    317179 aggata-c-a-a--
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498776 11 +  40650429 gtgaca-c-a-act
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148241  9 +    207569 aataaa-a-t-t--
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23620  9 -     74585 agtgta-t-a-a--
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46448 11 -    140813 GCAAGG-C-A-AGG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 1
s Mesocricetus_auratus.KB708134.1                         17426818 11 +  29670104 GTAACT-C-A-AGG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 7701 11 +     17804 AGAACG-C-A-GCT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8485 11 -     12984 AGAACG-C-A-GCT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16436 11 -     26561 AGAACG-C-A-GCT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982398 11 +  93316391 AGacta-a-a-act
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41750 10 +    145209 GGGT-A-T-G-CAT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182463  9 +    200668 gatact-g-t-t--
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19849 11 -     27822 AGAATA-C-A-ACT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6111  9 +     27589 agtgta-t-a-a--
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50193 11 -     62432 agacta-a-a-act
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176642  9 +    366855 TATACA-A-T-T--
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15969  9 -     63510 ggatta-t-a-a--
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36496  9 +     47283 gataca-a-t-t--
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    216 10 +      5579 -TAATG-C-A-ATG
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41682170 10 + 129401213 -TAATG-C-A-AGG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39489783 10 + 130317789 -TAATG-C-A-AGA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                             14352564  9 +  14710649 agtgta-t-a-a--
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790512  9 +  10118263 gataca-a-t-t--
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4384917  9 +   6019432 gataca-a-t-t--
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380733  9 +   4330536 gataca-a-t-t--
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117372 11 +    130748 agga-c-tca-acg
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26430 11 +     34575 AGAATA-C-G-ATT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466498  9 -  31847680 agtgta-t-a-a--
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125279  9 -    149072 gataca-a-t-t--
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 2
s Nomascus_annamensis.k141_1771965                           51172 11 -    132029 AGAATA-C-A-ACT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7267 11 -     16345 AGAATA-C-A-ACT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13152 11 +     22201 AGAATA-C-A-ACT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411436 11 -  22158432 AGAATA-C-A-ACT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23550 11 -     54323 AGAATA-C-A-ACT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196089  9 +   9404916 agtgta-t-a-a--
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93633890 11 + 196305487 AGACTA-C-A-ACT
i Nycticebus_bengalensis.LG01                            I 56 C 0
s Nycticebus_coucang.k141_3846325                              648 11 -      3937 AGACTA-C-A-ACT
i Nycticebus_coucang.k141_3846325                        I 56 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562140 11 - 199412804 AGACTA-C-A-ACT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 56 C 0
s Octodon_degus.JH651603.1                                11045092 11 -  11899542 GAGACA-C-A-ACT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449286  9 +   2017862 agtata-t-a-a--
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90047 11 -    140218 ATTACT-C-A-AGG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104887 11 +    107918 ATACCT-T-G-AGG
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11164 10 -     14239 ggga-a-a-a-agt
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37129  9 +    559221 agtgta-t-a-a--
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37270 11 -     51505 AGACTA-C-G-ACT
i Otolemur_crassicaudatus.k141_649260                    I 55 C 0
s Otolemur_garnettii.GL873799.1                             350284 11 +   1103335 AGTCTA-C-A-AAT
i Otolemur_garnettii.GL873799.1                          I 55 C 0
s Pan_troglodytes.CM009242.2                               1470260 11 - 189151597 AGAATA-C-A-ACT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22050  9 -    230217 ggttta-t-a-a--
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459376  9 -  18783137 ggttta-t-a-a--
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970096  9 +   8748460 ggttta-t-a-a--
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240662 11 - 183742232 AGAATA-C-A-ACT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7126 11 +     21308 AGAATA-C-A-ACT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288165 11 -  20919399 AGAATA-C-A-ACT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19781 11 -     27687 AGAATA-C-A-ACT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12917 11 +     16796 AGAATA-C-A-ACT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19727 11 -     23640 AGAATA-C-A-ACT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12695  9 +     78924 ggttca-t-a-g--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23571 11 +     31479 AGACTA-C-A-ACT
i Perodicticus_ibeanus.k141_1921260                      I 56 C 0
s Perodicticus_potto.k141_1854441                            15931 11 -     24908 AGACTA-C-A-ACT
i Perodicticus_potto.k141_1854441                        I 56 C 0
s Peromyscus_maniculatus.KI615324.1                         244532 11 +  18517816 ATAACT-T-G-AGG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29770 11 -     56120 GGGATA-C-A-ACT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6581 11 +      7560 ACAATA-C-A-ATT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62289 11 -     63152 ACAATA-C-A-ATT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44888 11 +     45295 ACAATA-C-A-ATT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2566 11 +      5735 acaata-c-a-att
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              671  9 +     22231 gataca-a-t-t--
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62702 11 +    207309 AGAATG-C-A-GCT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3798 11 -     25401 AGAATG-C-A-GCT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29537 11 +     58159 AGAATG-C-A-GCT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29813 11 +     63561 AGAATG-C-A-GCT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29576 11 +     51148 AGAATG-C-A-GCT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554545 11 -   4542175 AGAATG-C-A-GCT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29560 11 +     51125 AGAATG-C-A-GCT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        5990 11 +     39866 AGAATG-C-A-GCT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1075 11 -      9282 AGAACG-C-A-GCT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40479 11 -     87950 AGAACG-C-A-GCT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40872 11 -     88961 AGAATG-C-A-GCT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5571 11 -     39403 AGAACG-C-A-GCT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40525 11 +     87928 AGAACG-C-A-GCT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5568 11 -     60166 AGAACG-C-A-GCT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12504 11 -     67232 AGAACG-C-A-GCT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40420 11 -     90634 AGAATG-C-A-GCT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41888 11 +     89403 AGAACG-C-A-GCT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175400 11 - 189387572 AGAATA-C-A-ACT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190218 11 -   9816681 AGAATA-C-A-ACT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25063 11 +     69807 AGAATA-C-A-ATT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42258 11 -     80239 agaata-c-a-att
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563874 11 -   2598838 AGACTA-C-A-ACT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1510 11 -      7103 agacta-c-a-act
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2107 11 -     11706 agacta-c-a-act
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5843 11 -     30655 agacta-c-a-act
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32168 11 +     46564 agacta-c-a-act
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92439 11 -     98465 agacta-c-a-act
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6076 11 +     35169 agacta-c-a-act
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            33984 11 +     52041 GCAAGG-C-A-AGG
i Psammomys_obesus.NESX01036366.1                        C 0 I 1
s Pteronotus_parnellii.KE847780.1                            49708  9 -     66298 tatata-a-t-t--
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2342  9 -     18639 agtgta-t-a-a--
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838676  9 -  28871421 gattaa-a-t-t--
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             3535242  9 -   4952924 gattaa-a-t-t--
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            18096697  9 +  38429054 ggttta-t-a-a--
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24454 11 +     91421 AGAATA-C-A-ATT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150947 11 -   7812017 AGAATA-C-A-ATT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5324 11 +     72585 AGAATA-C-A-ATT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020262 10 -  90668790 -TAATG-C-A-AGG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911335  9 +   3329780 agtaaa-a-t-t--
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 C 0
s Rhinopithecus_bieti.k119_221883                            26283 11 +     27361 agaata-c-a-att
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119631 11 + 195417433 Agaata-c-a-att
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233891 11 -   7961872 agaata-c-a-att
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72659  9 -    116970 gattaa-a-t-t--
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 1 C 0
s Saguinus_bicolor.k141_1429097                               1658 11 +     27962 AGAACG-C-A-GCG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1666 11 +      6077 AGAACG-C-A-GCG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1685 11 +      5971 AGAACG-C-A-GCG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1739 11 +      5932 AGAACG-C-A-GCG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1884 11 -      2099 AGAATG-C-A-GCG
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       389006 11 - 209938924 AGAACG-C-A-GCG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1687 11 +      5979 AGAACG-C-A-GCG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2053 11 -      4301 AGAACG-C-A-GCG
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236137 11 +   5703754 AGAACG-C-G-GCT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5727 11 +     21866 AGAACG-C-A-GCT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113868 10 +    313613 aagataca-a-t--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22771 11 +     27374 AGAATA-C-A-ATT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26290 11 +     58920 AGAATA-C-A-ATT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12786 11 -     45317 AGAATA-C-A-ATT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20444 11 -     42441 AGAATA-C-A-ATT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23124 11 -     29113 AGAATA-C-A-ATT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26193 11 -     48123 AGAATA-C-A-ATT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46086 11 +     77746 ATAACT-C-C-AGG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856176  9 -   1910179 aggata-c-a-a--
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866144 11 +   3870691 GTGACC-C-A-ACT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4340  9 -     97271 agtgta-t-a-a--
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122380  9 +    196729 ggatta-t-a-a--
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388408 11 +   1523678 AGAATA-C-A-ACT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11485  9 +     22964 gatacg-a-t-t--
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 490 11 +      5583 aaga-c-tca-aca
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189209  9 +    199430 tggata-c-a-a--
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103165  9 -    539355 tggata-c-a-a--
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4764  2 +      6850 ------------CT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4803  2 +     20590 ------------CT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350648 11 - 186847797 AGAATA-C-A-ACT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22100 11 -     33621 AGAATA-C-A-ACT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17611 11 -     31044 agga-t-aca-acg
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477525  9 -    610378 gatacg-a-t-g--
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18335 11 +     26378 AGAATA-C-A-ATT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31019 11 -     78344 AGAATA-C-A-ATT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17656 11 +     25722 AGAATA-C-A-ATT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25881 11 -     62838 AGAATA-C-A-ATT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           25998 11 +     46913 AGAATA-C-A-ATT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6806 11 -     28527 AGAATA-C-A-ATT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27820 11 -     64340 AGAATA-C-A-ATT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25857 11 -     63452 AGAATA-C-A-ATT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7300 11 +     22490 AGAATA-C-A-ATT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          728 11 -      6147 AGAATA-C-A-ATT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7722 11 -     13050 agaata-c-a-att
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252961 11 -   6242583 agaata-c-a-att
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58692 11 +     59866 AGAATA-C-A-ATT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831457  2 -   4065304 ------------CT
i Tupaia_chinensis.KB320699.1                            I 6 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5967  6 -     70247 atacaa--------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_7153                   105094  9 -    105689 aagaaa-a-a-g--
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179691  9 +   5085361 agtgta-t-a-a--
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22928 11 -     30710 AGACTA-C-A-ACT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21835 10 -    147434 agacta-c-a-ac-
i Varecia_variegata.k141_289850                          C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_12041                102853  9 -    112863 agtgta-t-a-a--
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171909 11 -    224448 gtgata-c-a-act
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26506  9 -     86975 agtgta-t-a-a--
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1157 11 +      2695 TGCAAG-C-T-ACA
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 9
e Perognathus_longimembris.PerPac_flattened_line_28053       37455  0 +     38305 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254  0 -  37912305 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2918 14 +     36723 T---TT------ATAT--TTC--A---G--AG
s Acinonyx_jubatus.LLWD01001279.1                           810443 20 +   1699592 gtt-tt------gtac--ctc--aga-ggacc
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413180 20 +  29979442 ttt-tt------gtac--ttc--aga-gtgac
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15846  5 -     61208 T---T--------CAT----------------
i Allactaga_bullata.AllBul_scaffold_20030                I 7 I 4
s Allenopithecus_nigroviridis.k141_3755588                   45332 14 +     53615 t---tt------atat--ttc--a---g--ag
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41253 14 +     44087 T---TT------GTAT--TTC--A---G--AG
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13893 14 -     21945 T---TT------GTAT--TTC--A---G--AG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15569 14 +     32033 T---TT------GTAT--TTC--A---G--AG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70022 14 -     84148 T---TT------CTAT--TTC--A---G--AG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42255 14 -     78289 T---TT------ATAT--TTC--A---G--AG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41701 14 +     55831 T---TT------CTAT--TTC--A---G--AG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40143 14 -     64179 T---TT------ATAT--TTC--A---G--AG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21789 14 -     24835 T---TT------ATAT--TTC--A---G--AG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38772 14 +     45454 T---TT------ATAT--TTC--A---G--AG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44470 14 +     70886 T---TT------ATAT--TTC--A---G--AG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6595 14 +     30854 T---TT------ATAT--TTC--A---G--AG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30734 14 +     42133 T---TT------ATAT--TTC--A---G--AG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174502 18 -    412891 t---tt------gtat--ttc--aaa-atgag
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48549 14 -     65372 T---TT------ATAT--TTC--C---G--AG
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42296 14 +     43593 T---TT------ATAT--TTC--C---G--AG
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670309 14 +   5030052 T---TT------ATAT--TTC--C---G--AG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21951 14 -     23494 T---TT------ATAT--TTC--C---G--AG
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7087 14 +      8415 T---TT------ATAT--TTC--C---G--AG
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13848 14 -     32367 t---t--------tgtaatta--aga-c----
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 1 I 2
s Arctocebus_calabarensis.k141_1364444                       18151 16 -     45910 T---TT------GTAC--TTC--A-CTG--AT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2786 19 -     15198 t---tt------gtat--ttc--aaaaatgag
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272533 14 +  21539123 T---TT------ATAT--TTC--A---G--AG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8700 14 +     48076 T---TT------ATAT--GTC--A---G--AG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3837 14 -     28759 T---TT------ATAT--TTC--A---G--AG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31390 14 +     44353 T---TT------ATAT--TTC--A---G--AG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46761 14 -     71267 T---TT------ATAT--GTC--A---G--AG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20820 14 -     33135 T---TT------ATAT--TTC--A---G--AG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4006 16 +     11645 t---tt------gtac--ttc--a-gtg--ag
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4007 16 -     19611 t---tt------gtac--ttc--a-gtg--ag
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5723 14 +     28062 T---TT------GTAT--TTG--C---G--AG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41017 14 -     91139 T---TT------GTAT--TTG--C---G--AG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18543 14 +     95584 T---TT------GTAT--TTG--C---G--AG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18456 14 +    119600 T---TT------GTAT--TTG--C---G--AG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7940 14 +     18648 T---CT------ATGT--TTC--C---G--CG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7603 14 -     13885 G---TT------ATGT--CTC--C---G--AG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16301 14 +     17162 T---CT------ATGT--TTC--C---G--CA
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451256 14 + 189096842 T---CT------ATGT--TTC--C---G--CA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17549 14 -     18408 T---CT------ATGT--TTC--C---G--CA
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503229 20 +  60362399 ttt-tt------gtat--ttc--aga-gtgac
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6865 20 -     23171 ttt-tt------gtat--ttc--aga-gtgac
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220208 20 +   9314153 ttt-tt------gtat--ttc--aga-GTGAC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613343 20 +  59632846 ttt-tt------gtat--ttc--aga-gtgac
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104924 20 -  63665305 ttt-tt------gtat--ttc--aga-gtgac
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268074 17 +    496798 G---TT------GTAC--TTC--AAAAG--GG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2858 18 +      5315 t---tt------gtat--ttc--aaa-atgag
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993773 14 +  23392119 t---t--------tgt--tcctcaca-t----
i Cavia_aperea.AVPZ01000300.1                            C 0 I 2
s Cavia_porcellus.DS562891.1                               4997215 14 +  23407841 t---t--------tgt--tcctca-cgt----
i Cavia_porcellus.DS562891.1                             C 0 I 2
s Cavia_tschudii.CavTsc_scaffold_23560                       60316 14 -     66877 T---T--------TGT--TCCTCA-CGT----
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 2
s Cebuella_niveiventris.k141_592277                           2835 14 -     12580 T---CT------ATGT--TTC--T---G--CG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40721 14 +     53515 T---CT------ATGT--TTC--C---G--CG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368928 14 -  26074798 T---TT------GTGC--TTC--C---G--AG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5817 14 -     34880 T---TT------GTGC--TTC--C---G--AG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64912 14 -     89041 T---TT------GTGC--TTC--C---G--AG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1246 17 -      1636 G---TT------GTAC--TTC--AAAAG--GG
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489965 20 -  27778364 ttt-tt------gtac--ttc--aga-gtgag
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16798 20 +     27315 ttt-tt------gtac--ttc--aga-gtgag
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138492 14 -   4669795 T---TT------AAAT--TTC--A---G--AG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42232 14 +     47900 T---TT------AAAT--TTC--A---G--AG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42065 14 -     44860 T---TT------AAAT--TTC--A---G--AG
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42048 14 -    148725 T---TT------AAAT--TTC--A---G--AG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25146 14 -     40656 T---TT------GTAT--TTC--A---G--AG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5115 14 +     20796 T---TT------GTAT--TTC--A---G--AG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9305 14 -     17524 T---TT------GTAT--TTC--A---G--AG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25027 14 -     34525 T---TT------GTAT--TTC--A---G--AG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9736 14 -     25376 T---TT------GTAT--TTC--A---G--AG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362335 14 -  39242232 T---TT------GTAT--TTC--A---G--AG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268043 14 +  21565898 T---TT------GTAT--TTC--A---G--AG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29504 14 -     45857 T---TT------ATAT--TTC--A---G--AG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25324 14 -     32606 T---TT------ATAT--TTC--A---G--AG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1477 14 +      8499 T---TT------GTAT--TTC--A---G--AG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           22996 14 +     70610 T---TT------GTAT--TTC--A---G--AG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19921 14 +     36323 T---TT------GTAT--TTC--A---G--AG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10614 18 -     19938 t---tt------gcac--ttc--aga-attag
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28440 16 -     33796 T---TT------GTGC--TTC--A-GTG--CG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2970 16 -     15404 t---tt------gtgc--ttc--a-gtg--cg
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6831 14 -     32913 T---TT------CTGT--TTC--C---A--AG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17244 14 -     40346 T---TT------CTGT--TTC--C---G--AG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17499 14 +    216457 T---TT------CTGT--TTC--C---G--AG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17292 14 +     39636 T---TT------CTGT--TTC--C---G--AG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1671 14 +      5346 T---TT------ACGT--TTC--T---G--AG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40363 14 -    112038 T---TT------GTAT--TTG--C---G--AG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5935 14 +     34062 T---TT------GTAT--TTG--C---G--AG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340818 14 +  18827391 T---TT------GTAT--TTC--A---G--AG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7363 14 -     44032 T---TT------GTGT--TTC--A---G--AG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302143 14 - 135778131 T---TT------GTAT--TTC--A---G--AG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406597 14 -   2368649 t---tt------atat--ttc--a---g--ag
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376473 14 - 200372422 t---tt------atat--ttc--a---g--ag
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                 22 14 -     84244 T---TT------ATAT--TTC--A---G--AG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805085 18 +  53390261 t---tt------gaac--ttc--aaa-gtgtg
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           550 18 -      8242 t---tt------gtac--ttt--aaa-gtgag
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40123  5 -     83289 T---C--------TGT----------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 4
s Cricetulus_griseus.LT883664.1                          213112316  5 - 224834208 T---T--------TGC----------------
i Cricetulus_griseus.LT883664.1                          C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1719 20 +     87169 gtt-tt------atac--ttc--aga-gtgac
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642660 12 -   1526836 T---T--------TCT--TAC--A-GGC----
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 2
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2755 14 +     50838 T---A--------TGT--TCCTCA-TGT----
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 4
s Cuniculus_paca.CunPac_flattened_line_7025                   1398 14 +     36344 T---T--------TGT--TCCTCA-CAT----
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 2
s Dasypus_novemcinctus.JH564415.1                          2107945 18 -   2246927 t---tt------gtac--ctc--aga-aggag
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290387 16 +  12879189 t---cc------gagc--ttc--aga-g--ag
i Daubentonia_madagascariensis.ctg71                     I 1 C 0
s Desmodus_rotundus.KZ672289.1                            11862523 18 -  20541912 t---tt------gtcc--ttc--aaa-atgag
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662257 20 -   1390856 ttt-tt------gtac--ttc--aga-gtgag
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137042 20 -    198055 ttt-tt------gtac--ttc--aga-gtgag
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96130 14 -    115145 T---T--------CGT--TCCTCA-CAT----
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 2
s Dolichotis_patagonum.DolPat_scaffold_80628                  7719 14 +     14636 t---t--------tgt--tcctcaca-t----
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 2
s Echinops_telfairi.JH980293.1                            62851467 18 - 111700974 t---tt------gaac--ttc--aga-gtgAA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4091 18 +     19438 t---tt------gtac--ttt--aaa-gtgaa
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105108 18 -  10337057 a---tt------ATAC--TTC--A-TAATGAA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28330  5 +    110024 T---T--------TGC----------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 4
s Ellobius_talpinus.LOJH01026522.1                           10294  5 +     18970 T---T--------TGC----------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 4
s Enhydra_lutris.KZ291758.1                               24913760 20 +  41312741 ttt-ta------gtac--ttc--aga-gtgac
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576157 18 +  14770903 t---tt------gtat--ttc--ata-atggg
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039238 20 -   4378816 ttt-tt------gtgc--ttc--aga-gtgag
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373172 20 +  39960074 ttt-tt------gtgc--ttc--aga-gtgag
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409958 20 -    498745 ttt-tt------gtgc--ttc--aga-gtgag
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260341 14 +  21539334 T---TT------GTAT--TTC--A---G--AG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186244349 20 - 206538554 gtt-tt------gtac--ctc--aga-ggacg
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114135 20 - 205367284 gtt-tt------gtac--CTC--A-GAGGACG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25238 20 -     30238 gtt-tt------gtac--ctc--aga-ggacc
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122160 16 -    137831 T---TT------GTAC--TTC--A-CCA--AT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5700 16 +     22493 T---TT------GTAC--TTC--A-CCA--AT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17742 16 -     32986 T---Tt------gtac--ttc--a-ctg--at
i Galagoides_demidoff.k141_561628                        I 660 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16857 18 +     18121 t---tt------gtat--ttg--aga-gtgag
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               3255 14 -      8343 T---TT------ATAT--TTC--A---G--AG
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252266 14 - 186649187 t---tt------atat--ttc--a---g--ag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28223 20 -    327341 ctt-tc------gtac--ttg--aga-gtgac
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1924827 14 -  22651954 c---t--------tgt--tcctcaca-t----
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                      1547996 18 -   1711038 t---tt------gtat--ctt--aca-gtcag
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47312 18 +     49977 t---tt------gtat--ctt--gca-gtgag
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140259 14 -    630532 T---TT------ATAC--TTC--A---G--AG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66706 20 +     83186 G-TTTT------GTAC--TTT--A-GAGTGAC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69069 14 +    143317 T---T--------TGT--TCTTCA-TAT----
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 2
s Hylobates_agilis.k141_1155965                               3294 14 +     12352 T---TT------ATAC--TTC--A---G--AG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10477 14 +     55766 T---TT------ATAC--TTC--A---G--AG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050073 14 + 191637585 T---TT------ATAC--TTC--A---G--AG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798951 14 +  11177569 T---TT------ATAC--TTC--A---G--AG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384586 14 +   7955117 T---T--------TGTACTTT--A-GAC----
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 2
s Indri_indri.k141_2415743                                     126 16 +     11955 T---TT------GTAC--TTC--A-GTG--AG
i Indri_indri.k141_2415743                               N 0 C 0
s Jaculus_jaculus.JH725527.1                               1237005  5 +   9596543 t---t--------cat----------------
i Jaculus_jaculus.JH725527.1                             I 7 I 4
s Lagothrix_lagothricha.k141_246028                          41076 14 +    110728 T---TT------ATAT--TTC--A---G--AG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59634 18 -     65777 t---tt------gcat--ttc--ata-atggg
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1756 14 -     13097 T---TT------ATGT--TTC--C---G--AG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1707 14 +      5940 T---TT------ATGT--TTC--C---G--AG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1338 14 -      5717 T---TT------ATGT--TTC--C---G--AG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7950 14 -     11567 T---TT------ATGT--TTC--C---G--AG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9331 14 -     12945 T---TT------ATGT--TTC--C---G--AG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6796 16 +     29618 T---TT------GTGC--TTC--A-GTG--AG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6793 16 +     31569 T---TT------GTGC--TTC--A-GTG--AG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6803 16 +     24756 t---tt------gtgc--ttc--a-gtg--ag
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6797 16 +     16388 T---TT------GTGC--TTC--A-GTG--AG
i Lepilemur_septentrionalis.k141_360456                  I 1 C 0
s Leptonychotes_weddellii.KB714746.1                        811110 20 -   3914936 ttt-tt------gtac--ttc--aga-gtgac
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               330445 14 -   1826925 T---TT------AAAT--TTC--A---G--AG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7933 16 +     19643 T---TT------GTAC--TTC--A-CTG--GT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041593 16 -   6120653 T---TT------GTAC--TTC--A-CTG--GT
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612498 20 +  59628241 ttt-tt------gtat--ttc--aga-gtgac
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42762 14 -     61512 T---TT------ATAT--TTC--A---G--AG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370423 14 -  60120075 T---TT------ATAT--TTC--A---G--AG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22678 14 +     30207 T---TT------ATAT--TTC--A---G--AG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19781 14 -     24934 T---TT------ATAT--TTC--A---G--AG
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22630 14 +     30527 T---TT------ATAT--TTC--A---G--AG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33820 14 -     50087 T---TT------ACAT--TTC--A---G--AG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43591 14 +     51645 T---TT------ATAT--TTC--A---G--AG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412759 14 - 187317192 T---TT------ATAT--TTC--A---G--AG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396982 14 +  25927173 T---TT------ACAT--TTC--A---G--AG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46146 14 -     62418 T---TT------ACAT--TTC--A---G--AG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22801 14 +     24253 T---TT------ATAT--TTC--A---G--AG
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42622 14 +     59329 T---TT------ACAT--TTC--A---G--AG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268555 14 +    668171 T---TT------ACAT--TTC--A---G--AG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19736 14 +     21031 T---TT------ATAT--TTC--A---G--AG
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  333 14 +     17132 T---TT------ACAT--TTC--A---G--AG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221057 18 -    270270 t---tt------gtac--ttt--aaa-atgaa
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319833 14 +  24302211 T---TT------AAAT--TTC--A---G--AG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354665 14 -    752769 T---TT------AAAT--TTC--A---G--AG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671339 20 -    737560 tt-gtc------acac--ttc--aga-gtgag
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218630 20 +    317179 tt-gtc------ccac--ttc--aga-gtgag
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498787 14 +  40650429 t---t--------tgtacttt--aga-c----
i Marmota_marmota.CZRN01000018.1                         C 0 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                       148250 18 +    207569 t---tt------gtgc--ttt--aaa-gtgaa
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23629 20 -     74585 ttt-ta------gtac--ttc--aga-gtgac
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46460  3 -    140813 -------------TGT----------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 I 4
s Mesocricetus_auratus.KB708134.1                         17426829  5 +  29670104 T---T--------TGG----------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 4
s Mico_argentatus.k141_582562                                 7712 14 +     17804 T---CT------ATGT--TTC--C---G--CG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8496 14 -     12984 T---CT------ATGT--TTC--C---G--CG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16447 14 -     26561 T---CT------ATGT--TTC--C---G--CG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982409 16 +  93316391 t---tt------gtgc--ttc--a-gtG--AG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41760 18 +    145209 T---TT------GTAC--TTC--A-GAGTGAA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182472 18 +    200668 t---tt------gtac--ttc--aaa-atgag
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19860 14 -     27822 T---TT------GTAT--TTC--A---G--AG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6120 20 +     27589 ttt-tt------gtac--ttc--aga-gtgac
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50204 16 -     62432 t---tt------gtgc--ttc--a-gtg--ag
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176651 18 +    366855 T---TT------GTGC--TTC--A-AAATGAG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15978 20 -     63510 ctt-tc------gtac--ttg--aga-gtgac
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36505 18 +     47283 t---tt------gtat--ttc--ata-atggg
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    226  5 +      5579 T---T--------TGG----------------
i Mus_caroli.FMAL02030609.1                              C 0 I 4
s Mus_musculus.chr8                                       41682180  5 + 129401213 T---T--------TGG----------------
i Mus_musculus.chr8                                      C 0 I 4
s Mus_spretus.CM004101.1                                  39489793  5 + 130317789 T---T--------TGG----------------
i Mus_spretus.CM004101.1                                 C 0 I 4
s Mustela_putorius.JH418006.1                             14352573 20 +  14710649 ttt-ta------gtac--ttc--aga-gtgac
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790521 18 +  10118263 t---tt------gcat--ttc--caa-atggg
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4384926 18 +   6019432 t---tt------gtat--ttc--ata-atggg
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380742 18 +   4330536 t---tt------gtat--ttc--ata-atggg
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117383 16 +    130748 t---tt------gta----tc--aga-gtaag
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26441 14 +     34575 T---TT------ATAT--TTC--A---G--AG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466507 20 -  31847680 ttt-tt------gtac--ttc--aga-gtgac
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125290 18 -    149072 t---tt------gtac--ttc--aaa-atgAG
i Noctilio_leporinus.NocLep_scaffold_7894                I 2 I 142
s Nomascus_annamensis.k141_1771965                           51183 14 -    132029 T---TT------ATAC--TTC--A---G--AG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7278 14 -     16345 T---TT------ATAC--TTC--A---G--AG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13163 14 +     22201 T---TT------ATAC--TTC--A---G--AG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411447 14 -  22158432 T---TT------ATAC--TTC--A---G--AG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23561 14 -     54323 T---TT------ATAC--TTC--A---G--AG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196098 20 +   9404916 ttt-tt------gtat--ttc--aga-gtgac
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93633901 16 + 196305487 T---TT------GTAC--TTC--A-CTG--AT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              659 16 -      3937 T---TT------GTAC--TTC--A-CTG--AT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562151 16 - 199412804 T---TT------GTAC--TTC--A-CTG--AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11045103 14 -  11899542 T---T--------TGT--TCTTCA-TGT----
i Octodon_degus.JH651603.1                               C 0 I 4
s Odobenus_rosmarus.KB229312.1                             1449295 20 +   2017862 ttt-tt------gtac--ttc--aga-gtgac
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90058  5 -    140218 T---T--------TGC----------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_2487                   104898  5 +    107918 T---T--------TAG----------------
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 I 4
s Orycteropus_afer.OryAfe_flattened_line_171931              11174 18 -     14239 t---tt------gtat--ttc--aga-gtgag
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37138 20 +    559221 ttt-tt------gtat--ttc--aga-gtgac
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37281 16 -     51505 T---TT------GTAC--TTC--A-CTA--AT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350295 16 +   1103335 T---TT------GTAC--TTC--A-CTA--AT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470271 14 - 189151597 T---TT------ATAT--TTC--A---G--AG
i Pan_troglodytes.CM009242.2                             C 0 I 3
s Panthera_onca.PanOnc_flattened_line_3271                   22059 20 -    230217 gtt-tt------gtac--ctc--aga-ggccc
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459385 20 -  18783137 gtt-tt------gtac--ctc--aga-ggccc
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970105 20 +   8748460 gtt-tt------gtac--ctc--aga-ggccc
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240673 14 - 183742232 T---TT------AAAT--TTC--A---G--AG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7137 14 +     21308 T---TT------AAAT--TTC--A---G--AG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288176 14 -  20919399 T---TT------AAAT--TTC--A---G--AG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19792 14 -     27687 T---TT------AAAT--TTC--A---G--AG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12928 14 +     16796 T---TT------AAAT--TTC--A---G--AG
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19738 14 -     23640 T---TT------AAAT--TTC--A---G--AG
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12704 20 +     78924 gtt-tt------gtac--tac--aga-gtgac
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23582 16 +     31479 T---TT------GTAC--TTC--A-CTG--AT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            15942 16 -     24908 T---TT------GTAC--TTC--A-CTG--AT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244543  5 +  18517816 T---T--------TGC----------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 4
s Petromus_typicus.PetTyp_scaffold_17301                     29781 14 -     56120 T---T--------TGT--TCCTCA-CGT----
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 2
s Piliocolobus_badius.k141_2495623                            6592 14 +      7560 T---TT------ATAT--TTC--A---G--AG
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62300 14 -     63152 T---TT------ATAT--TTC--A---G--AG
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44899 14 +     45295 T---TT------ATAT--TTC--A---G--AG
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2577 14 +      5735 t---tt------atat--ttc--a---g--ag
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              680 18 +     22231 t---tt------gtat--ttc--ata-atggg
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62713 14 +    207309 C---TT------ACAT--TTC--C---G--AG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3809 14 -     25401 C---TT------ATAT--TTC--C---G--AG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29548 14 +     58159 C---TT------ATAT--TTC--C---G--AG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29824 14 +     63561 C---TT------ATAT--TTC--C---G--AG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29587 14 +     51148 C---TT------ATAT--TTC--C---G--AG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554556 14 -   4542175 C---TT------ATAT--TTC--C---G--AG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29571 14 +     51125 C---TT------ATAT--TTC--C---G--AG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6001 14 +     39866 T---TT------CTGT--TTC--C---T--TG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1086 14 -      9282 T---TT------CTGT--TTC--C---T--TG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40490 14 -     87950 T---TT------CTGT--TTC--C---T--TG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40883 14 -     88961 T---TT------CTGT--TTC--C---T--TG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5582 14 -     39403 T---TT------CTGT--TTC--C---T--TG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40536 14 +     87928 T---TT------CTGT--TTC--C---T--TG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5579 14 -     60166 T---TT------CTGT--TTC--C---T--TG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12515 14 -     67232 T---TT------CTGT--TTC--C---T--TG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40431 14 -     90634 T---TT------CTGT--TTC--C---T--TG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41899 14 +     89403 T---TT------CTGT--TTC--C---T--TG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175411 14 - 189387572 T---TT------ATAT--TTC--A---G--AG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190229 14 -   9816681 T---TT------ATAT--TTC--A---G--AG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25074 14 +     69807 T---TT------ATAT--TTC--A---G--AG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42269 14 -     80239 t---tt------atat--ttc--a---g--ag
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563885 16 -   2598838 T---TT------GTAC--TTC--A-GTG--AG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1521 16 -      7103 t---tt------gtac--ttc--a-gtg--ag
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2118 16 -     11706 t---tt------gtac--ttc--a-gtg--ag
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5854 16 -     30655 t---tt------gtac--ttc--a-gtg--ag
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32179 16 +     46564 t---tt------gtac--ttc--a-gtg--ag
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92450 16 -     98465 t---tt------gtac--ttc--a-gtg--ag
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6087 16 +     35169 t---tt------gtac--ttg--a-gtg--ag
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            33996  3 +     52041 -------------TGT----------------
i Psammomys_obesus.NESX01036366.1                        I 1 I 4
s Pteronotus_parnellii.KE847780.1                            49717 18 -     66298 t---tt------gtac--ttc--aaa-atgag
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2351 20 -     18639 ttt-ta------gtac--ttc--aga-gtgac
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838685 18 -  28871421 t---tt------gtac--ttt--aaa-gtgaa
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535251 18 -   4952924 t---tt------gtac--ttt--aaa-gtgaa
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096706 20 +  38429054 gtt-tt------gtac--ctc--aga-ggacc
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24465 14 +     91421 T---TT------ATAT--TTC--A---G--AG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150958 14 -   7812017 T---TT------ATAT--TTC--A---G--AG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5335 14 +     72585 T---TT------ATAT--TTC--A---G--AG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020272  5 -  90668790 T---T--------TGG----------------
i Rattus_norvegicus.chr16                                C 0 I 4
s Rhinolophus_sinicus.LVEH01000134.1                       2911344 17 +   3329780 t---tt-------tac--ctt--aaa-gtgag
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26294 14 +     27361 t---tt------atat--ttc--a---g--ag
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119642 14 + 195417433 t---tt------atat--ttc--a---g--ag
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233902 14 -   7961872 t---tt------atat--ttc--a---g--ag
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72668 18 -    116970 t---tt------gtac--ttt--aaa-gtgaa
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1669 14 +     27962 T---TT------ACGT--TTC--T---G--AG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1677 14 +      6077 T---TT------ACGT--TTC--C---G--AG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1696 14 +      5971 T---TT------ATGT--TTC--C---G--AG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1750 14 +      5932 T---TT------ACGT--TTC--C---G--AG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1895 14 -      2099 T---TT------ATGT--TTC--C---G--AG
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       389017 14 - 209938924 T---TT------ACGT--TTC--T---G--AG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1698 14 +      5979 T---TT------ATGT--TTC--C---G--AG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2064 14 -      4301 T---TT------ACGT--TTC--C---G--AG
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236148 14 +   5703754 T---TT------GTGC--TTC--C---G--AG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5738 14 +     21866 T---TT------GTGC--TTC--C---G--AG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113878 18 +    313613 t---tt------gtac--ttc--aga-gtgtg
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22782 14 +     27374 T---TT------ATAT--TTC--A---G--AG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26301 14 +     58920 T---TT------ATAT--TTC--A---G--AG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12797 14 -     45317 T---TT------ATAT--TTC--A---G--AG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20455 14 -     42441 T---TT------ATAT--TTC--A---G--AG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23135 14 -     29113 T---TT------ATAT--TTC--A---G--AG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26204 14 -     48123 T---TT------ATAT--TTC--A---G--AG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46097  5 +     77746 T---T--------TGC----------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 4
s Solenodon_paradoxus.SolPar_flattened_line_126            1856185 21 -   1910179 tttttt------ttac--ttc--cga-gtgag
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866155 14 +   3870691 T---T--------TGTACTTT--A-GAC----
i Spermophilus_dauricus.KZ294078.1                       C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525              4349 20 -     97271 ttt-tt------gtac--ttc--aga-gtgac
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122389 20 +    196729 ctt-tc------gtac--ttg--aga-gtgac
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388419 14 +   1523678 T---TT------ATAA--TTC--A---G--AG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11494 18 +     22964 t---tt------gaac--ttc--aa-cgtgtg
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 501 16 +      5583 t---tt------gta----tc--aga-gtaag
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189218 20 +    199430 ttt-tt------gtac--ttc--aga-gtgag
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103174 20 -    539355 ttt-tt------gtac--ttc--aga-gtgag
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4766 17 +      6850 G---TT------GCAC--TTC--AGAGG--AG
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4805 17 +     20590 G---TT------GCAC--TTC--AGAGG--AG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350659 14 - 186847797 T---TT------AAAT--TTC--A---G--AG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22111 12 -     33621 T---T--------TGT--TCCTCA---T----
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_31955                   17622 18 -     31044 t---tt------gcac--ttc--aga-attag
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477534 18 -    610378 t---tt------gtat--ttc--gaa-atgag
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18346 14 +     26378 T---TT------ATAT--TTC--A---G--AG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31030 14 -     78344 T---TT------ATAT--TTC--A---G--AG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17667 14 +     25722 T---TT------ATAT--TTC--A---G--AG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25892 14 -     62838 T---TT------ATAT--TTC--A---G--AG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26009 14 +     46913 T---TT------ATAT--TTC--A---G--AG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6817 14 -     28527 T---TT------ATAT--TTC--A---G--AG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27831 14 -     64340 T---TT------ATAT--TTC--A---G--AG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25868 14 -     63452 T---TT------ATAT--TTC--A---G--AG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7311 14 +     22490 T---TT------ATAT--TTC--A---G--AG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          739 14 -      6147 T---TT------ATAT--TTC--A---G--AG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7733 14 -     13050 t---tt------atat--ttc--a---g--ag
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252972 14 -   6242583 t---tt------atat--ttc--a---g--ag
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58703 14 +     59866 T---TT------ATAT--TTC--A---G--AG
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831459 24 -   4065304 T---CTTACCAAAAAC--TCT--A-CCGTGAG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5975 24 -     70247 t---cttaacaaatac--ttt--a-ccatgag
i Tupaia_tana.TupTan_flattened_line_394                  I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105103 18 -    105689 t---tt------ggac--tta--a-gtgtatg
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179700 20 +   5085361 ttt-tt------gtac--ttc--aga-gtgac
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22939 16 -     30710 T---TT------GTAC--TTC--A-ATG--AG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21846 16 -    147434 t---tt------gtac--ttc--aa-tg--ag
i Varecia_variegata.k141_289850                          I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102862 20 -    112863 ttt-tt------gtat--ttc--aga-gtgac
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171920 14 -    224448 t---t--------tgtacttc--aga-c----
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 2
s Zalophus_californianus.ZalCal_flattened_line_17732         26515 20 -     86975 ttt-tt------gtac--ttc--aga-gtgac
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1177  5 +      2695 T---T--------TGT----------------
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 9 I 4
e Perognathus_longimembris.PerPac_flattened_line_28053       37455  0 +     38305 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254  0 -  37912305 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2932 3 +     36723 T-C---C
s Acinonyx_jubatus.LLWD01001279.1                           810463 3 +   1699592 t-c---t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413200 3 +  29979442 t-c---t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15855 2 -     61208 --C---A
i Allactaga_bullata.AllBul_scaffold_20030                I 4 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45346 3 +     53615 t-c---c
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41267 3 +     44087 T-C---C
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13907 3 -     21945 T-C---C
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15583 3 +     32033 T-C---C
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70036 3 -     84148 T-C---C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42269 3 -     78289 T-C---C
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41715 3 +     55831 T-C---C
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40157 3 -     64179 T-C---C
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21803 3 -     24835 T-C---C
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38786 3 +     45454 T-C---C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44484 3 +     70886 T-C---C
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6609 3 +     30854 T-C---C
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30748 3 +     42133 T-C---C
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174520 3 -    412891 t-c---t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48563 3 -     65372 T-C---C
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42310 3 +     43593 T-C---C
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670323 3 +   5030052 T-C---C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21965 3 -     23494 T-C---C
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7101 3 +      8415 T-C---C
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13864 5 -     32367 --agtcc
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 2 C 0
s Arctocebus_calabarensis.k141_1364444                       18167 3 -     45910 T-C---C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2805 3 -     15198 t-c---t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272547 3 +  21539123 T-C---C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8714 3 +     48076 T-C---C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3851 3 -     28759 T-C---C
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31404 3 +     44353 T-C---C
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46775 3 -     71267 T-C---C
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20834 3 -     33135 T-C---C
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4022 3 +     11645 t-c---c
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4023 3 -     19611 t-c---c
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5737 3 +     28062 T-C---C
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41031 3 -     91139 T-C---C
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18557 3 +     95584 T-C---C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18470 3 +    119600 T-C---C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7954 3 +     18648 T-C---C
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7617 3 -     13885 C-C---C
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16315 3 +     17162 T-C---C
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451270 3 + 189096842 T-C---C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17563 3 -     18408 T-C---C
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503249 3 +  60362399 t-c---t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6885 3 -     23171 t-c---t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220228 3 +   9314153 T-C---T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613363 3 +  59632846 t-c---t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104944 3 -  63665305 t-c---t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268091 3 +    496798 T-C---T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2876 3 +      5315 t-c---t
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993789 2 +  23392119 --g---a
i Cavia_aperea.AVPZ01000300.1                            I 2 C 0
s Cavia_porcellus.DS562891.1                               4997231 2 +  23407841 --g---a
i Cavia_porcellus.DS562891.1                             I 2 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60332 2 -     66877 --G---A
i Cavia_tschudii.CavTsc_scaffold_23560                   I 2 C 0
s Cebuella_niveiventris.k141_592277                           2849 3 -     12580 T-C---C
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40735 3 +     53515 T-C---C
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368942 3 -  26074798 T-C---C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5831 3 -     34880 T-C---C
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64926 3 -     89041 T-C---C
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1263 3 -      1636 T-C---T
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489985 3 -  27778364 t-c---t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16818 3 +     27315 t-c---t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138506 3 -   4669795 T-C---C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42246 3 +     47900 T-C---C
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42079 3 -     44860 T-C---C
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42062 3 -    148725 T-C---C
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25160 3 -     40656 T-C---C
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5129 3 +     20796 T-C---C
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9319 3 -     17524 T-C---C
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25041 3 -     34525 T-C---C
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9750 3 -     25376 T-C---C
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362349 3 -  39242232 T-C---C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268057 3 +  21565898 T-C---C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29518 3 -     45857 T-C---C
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25338 3 -     32606 T-C---C
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1491 3 +      8499 T-C---C
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23010 3 +     70610 T-C---C
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19935 3 +     36323 T-C---C
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10632 3 -     19938 t-c---c
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28456 3 -     33796 T-C---C
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2986 3 -     15404 t-c---c
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6845 3 -     32913 T-C---C
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17258 3 -     40346 T-C---C
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17513 3 +    216457 T-C---C
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17306 3 +     39636 T-C---C
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1685 3 +      5346 C-C---C
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40377 3 -    112038 T-C---C
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5949 3 +     34062 T-C---C
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340832 3 +  18827391 T-C---C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7377 3 -     44032 T-C---C
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302157 3 - 135778131 T-C---C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406611 3 -   2368649 t-C---C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376487 3 - 200372422 t-c---c
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                 36 3 -     84244 T-C---C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805103 3 +  53390261 t-c---t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           568 3 -      8242 t-g---t
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40132 2 -     83289 --C---A
i Cricetomys_gambianus.CriGam_scaffold_14425             I 4 C 0
s Cricetulus_griseus.LT883664.1                          213112325 2 - 224834208 --C---A
i Cricetulus_griseus.LT883664.1                          I 4 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1739 3 +     87169 t-c---t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642674 2 -   1526836 --G---A
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 2 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1414 2 +     36344 --G---A
i Cuniculus_paca.CunPac_flattened_line_7025              I 2 C 0
s Dasypus_novemcinctus.JH564415.1                          2107963 3 -   2246927 t-c---c
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290403 3 +  12879189 t-c---c
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862541 3 -  20541912 t-c---t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662277 3 -   1390856 t-c---t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137062 3 -    198055 t-c---t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7735 2 +     14636 --g---a
i Dolichotis_patagonum.DolPat_scaffold_80628             I 2 C 0
s Echinops_telfairi.JH980293.1                            62851485 3 - 111700974 t-g---t
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4109 3 +     19438 t-c---c
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105126 3 -  10337057 T-c---t
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28339 2 +    110024 --C---A
i Ellobius_lutescens.LOEQ01008920.1                      I 4 C 0
s Ellobius_talpinus.LOJH01026522.1                           10303 2 +     18970 --C---A
i Ellobius_talpinus.LOJH01026522.1                       I 4 C 0
s Enhydra_lutris.KZ291758.1                               24913780 3 +  41312741 t-c---t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576175 3 +  14770903 t-c---t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039258 3 -   4378816 t-c---t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373192 3 +  39960074 t-c---t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409978 3 -    498745 t-c---t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260355 3 +  21539334 T-C---C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186244369 3 - 206538554 t-c---t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114155 3 - 205367284 T-C---T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25258 3 -     30238 t-c---t
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122176 3 -    137831 T-C---C
i Galago_moholi.ctg3793                                  C 0 I 2
s Galago_senegalensis.k141_991736                             5716 3 +     22493 T-C---C
i Galago_senegalensis.k141_991736                        C 0 I 2
s Galagoides_demidoff.k141_561628                            17758 3 -     32986 t-c---c
i Galagoides_demidoff.k141_561628                        C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_74466               16875 3 +     18121 t-c---t
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               3269 3 -      8343 T-C---C
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252280 3 - 186649187 t-c---c
i Gorilla_gorilla.LT578341.1                             C 0 I 9
s Helogale_parvula.HelPar_flattened_line_2585                28243 3 -    327341 t-g---t
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1924843 2 -  22651954 --g---t
i Heterocephalus_glaber.JH602082.1                       I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548014 3 -   1711038 t-g---a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47330 3 +     49977 t-g---a
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140273 3 -    630532 T-C---C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66726 3 +     83186 T-C---T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69085 2 +    143317 --G---A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 2 C 0
s Hylobates_agilis.k141_1155965                               3308 3 +     12352 T-C---C
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10491 3 +     55766 T-C---C
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050087 3 + 191637585 T-C---C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798965 3 +  11177569 T-C---C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384602 5 +   7955117 --AGACC
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Indri_indri.k141_2415743                                     142 3 +     11955 T-C---C
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237014 2 +   9596543 --c---a
i Jaculus_jaculus.JH725527.1                             I 4 C 0
s Lagothrix_lagothricha.k141_246028                          41090 3 +    110728 T-C---C
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59652 3 -     65777 t-c---t
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 9
s Leontocebus_fuscicollis.k141_2994775                        1770 3 -     13097 C-C---C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1721 3 +      5940 C-C---C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1352 3 -      5717 C-C---C
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7964 3 -     11567 T-C---C
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9345 3 -     12945 T-C---C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6812 3 +     29618 T-C---C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6809 3 +     31569 T-C---C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6819 3 +     24756 t-c---c
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6813 3 +     16388 T-C---C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811130 3 -   3914936 t-c---t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               330459 3 -   1826925 T-C---C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7949 3 +     19643 T-C---C
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041609 3 -   6120653 T-C---C
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612518 3 +  59628241 t-c---t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42776 3 -     61512 T-C---C
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370437 3 -  60120075 T-C---C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22692 3 +     30207 T-C---C
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19795 3 -     24934 T-C---C
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22644 3 +     30527 T-C---C
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33834 3 -     50087 T-C---C
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43605 3 +     51645 T-C---C
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412773 3 - 187317192 T-C---C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396996 3 +  25927173 T-C---C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46160 3 -     62418 T-C---C
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22815 3 +     24253 T-C---C
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42636 3 +     59329 T-C---C
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268569 3 +    668171 T-C---C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19750 3 +     21031 T-C---C
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  347 3 +     17132 T-C---C
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221075 3 -    270270 t-c---t
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319847 3 +  24302211 T-C---C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354679 3 -    752769 T-C---C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671359 3 -    737560 t-c---t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218650 3 +    317179 t-c---t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498803 5 +  40650429 --agacc
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148268 3 +    207569 t-g---t
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23649 3 -     74585 t-c---t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46467 2 -    140813 --C---A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 4 C 0
s Mesocricetus_auratus.KB708134.1                         17426838 2 +  29670104 --C---A
i Mesocricetus_auratus.KB708134.1                        I 4 C 0
s Mico_argentatus.k141_582562                                 7726 3 +     17804 T-C---C
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8510 3 -     12984 T-C---C
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16461 3 -     26561 T-C---C
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982425 3 +  93316391 T-C---C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    41778 3 +    145209 T-A---C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 796
s Micronycteris_hirsuta.MicHir_scaffold_2233                182490 3 +    200668 t-c---t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19874 3 -     27822 T-C---C
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6140 3 +     27589 t-c---t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50220 3 -     62432 t-c---c
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176669 3 +    366855 T-C---T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   15998 3 -     63510 t-c---t
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36523 3 +     47283 t-c---t
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    235 2 +      5579 --C---A
i Mus_caroli.FMAL02030609.1                              I 4 C 0
s Mus_musculus.chr8                                       41682189 2 + 129401213 --C---A
i Mus_musculus.chr8                                      I 4 C 0
s Mus_spretus.CM004101.1                                  39489802 2 + 130317789 --C---A
i Mus_spretus.CM004101.1                                 I 4 C 0
s Mustela_putorius.JH418006.1                             14352593 3 +  14710649 t-c---t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790539 3 +  10118263 t-c---t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4384944 3 +   6019432 t-c---t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380760 3 +   4330536 t-c---t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117399 3 +    130748 t-t---c
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26455 3 +     34575 T-C---C
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466527 3 -  31847680 t-c---t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125450 3 -    149072 T-C---T
i Noctilio_leporinus.NocLep_scaffold_7894                I 142 C 0
s Nomascus_annamensis.k141_1771965                           51197 3 -    132029 T-C---C
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7292 3 -     16345 T-C---C
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13177 3 +     22201 T-C---C
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411461 3 -  22158432 T-C---C
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23575 3 -     54323 T-C---C
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196118 3 +   9404916 t-c---t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93633917 3 + 196305487 T-C---C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              675 3 -      3937 T-C---C
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562167 3 - 199412804 T-C---C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449315 3 +   2017862 t-c---t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90067 2 -    140218 --C---A
i Ondatra_zibethicus.OndZib_scaffold_7387                I 4 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104907 2 +    107918 --C---A
i Onychomys_torridus.OnyTor_scaffold_2487                I 4 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11192 3 -     14239 g-a---t
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37158 3 +    559221 t-c---t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37297 3 -     51505 T-C---C
i Otolemur_crassicaudatus.k141_649260                    C 0 I 2
s Otolemur_garnettii.GL873799.1                             350311 3 +   1103335 T-C---C
i Otolemur_garnettii.GL873799.1                          C 0 I 2
s Pan_troglodytes.NBAG03003182.1                              9468 4 -     24457 TCC---C
i Pan_troglodytes.NBAG03003182.1                         I 664 I 388
s Panthera_onca.PanOnc_flattened_line_3271                   22079 3 -    230217 t-c---t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459405 3 -  18783137 t-c---t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970125 3 +   8748460 t-c---t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240687 3 - 183742232 T-C---C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7151 3 +     21308 T-C---C
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288190 3 -  20919399 T-C---C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19806 3 -     27687 T-C---C
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12942 3 +     16796 T-C---C
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19752 3 -     23640 T-C---C
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12724 3 +     78924 t-c---t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23598 3 +     31479 T-C---C
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            15958 3 -     24908 T-C---C
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244552 2 +  18517816 --C---A
i Peromyscus_maniculatus.KI615324.1                      I 4 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29797 2 -     56120 --G---T
i Petromus_typicus.PetTyp_scaffold_17301                 I 2 C 0
s Piliocolobus_badius.k141_2495623                            6606 3 +      7560 T-C---C
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62314 3 -     63152 T-C---C
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44913 3 +     45295 T-C---C
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2591 3 +      5735 t-C---C
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              698 3 +     22231 t-c---t
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62727 3 +    207309 T-C---C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3823 3 -     25401 T-C---C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29562 3 +     58159 T-C---C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29838 3 +     63561 T-C---C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29601 3 +     51148 T-C---C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554570 3 -   4542175 T-C---C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29585 3 +     51125 T-C---C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6015 3 +     39866 T-C---C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1100 3 -      9282 T-C---C
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40504 3 -     87950 T-C---C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40897 3 -     88961 T-C---C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5596 3 -     39403 T-C---C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40550 3 +     87928 T-C---C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5593 3 -     60166 T-C---C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12529 3 -     67232 T-C---C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40445 3 -     90634 T-C---C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41913 3 +     89403 T-C---C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175425 3 - 189387572 T-C---C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190243 3 -   9816681 T-C---C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25088 3 +     69807 C-C---C
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42283 3 -     80239 c-c---c
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563901 3 -   2598838 T-C---C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1537 3 -      7103 t-c---c
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2134 3 -     11706 t-c---c
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5870 3 -     30655 t-c---c
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32195 3 +     46564 t-c---c
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92466 3 -     98465 t-c---c
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6103 3 +     35169 t-c---c
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34003 2 +     52041 --C---A
i Psammomys_obesus.NESX01036366.1                        I 4 C 0
s Pteronotus_parnellii.KE847780.1                            49735 3 -     66298 t-c---t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2371 3 -     18639 t-c---t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838703 3 -  28871421 t-c---c
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535269 3 -   4952924 t-c---c
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096726 3 +  38429054 t-c---t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24479 3 +     91421 T-C---C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150972 3 -   7812017 T-C---C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5349 3 +     72585 T-C---C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020281 2 -  90668790 --C---A
i Rattus_norvegicus.chr16                                I 4 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911361 3 +   3329780 t-g---a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26308 3 +     27361 t-c---c
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119656 3 + 195417433 t-C---C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233916 3 -   7961872 t-c---c
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72686 3 -    116970 t-c---c
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1683 3 +     27962 C-C---C
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1691 3 +      6077 C-C---C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1710 3 +      5971 C-C---C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1764 3 +      5932 C-C---C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1909 3 -      2099 C-C---C
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       389031 3 - 209938924 C-C---C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1712 3 +      5979 C-C---C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2078 3 -      4301 C-C---C
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236162 3 +   5703754 T-C---C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5752 3 +     21866 T-C---C
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113896 3 +    313613 t-c---t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22796 3 +     27374 T-C---C
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26315 3 +     58920 T-C---C
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12811 3 -     45317 T-C---C
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20469 3 -     42441 T-C---C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23149 3 -     29113 T-C---C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26218 3 -     48123 T-C---C
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46106 2 +     77746 --C---A
i Sigmodon_hispidus.SigHis_scaffold_20193                I 4 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856206 3 -   1910179 t-a---t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866171 5 +   3870691 --AGACC
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4369 3 -     97271 t-c---t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122409 3 +    196729 t-g---t
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388433 3 +   1523678 T-C---C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11512 3 +     22964 t-c---t
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 517 3 +      5583 t-c---c
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189238 3 +    199430 t-c---t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103194 3 -    539355 t-c---t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4783 3 +      6850 T-C---T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4822 3 +     20590 T-C---T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350673 3 - 186847797 T-C---C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22125 2 -     33621 --A---T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17640 3 -     31044 t-c---c
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477552 3 -    610378 t-c---t
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18360 3 +     26378 T-C---C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31044 3 -     78344 T-C---C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17681 3 +     25722 T-C---C
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25906 3 -     62838 T-C---C
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26023 3 +     46913 T-C---C
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6831 3 -     28527 T-C---C
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27845 3 -     64340 T-C---C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25882 3 -     63452 T-C---C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7325 3 +     22490 T-C---C
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          753 3 -      6147 T-C---C
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7747 3 -     13050 t-c---c
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252986 3 -   6242583 t-c---c
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58717 3 +     59866 T-C---C
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831483 3 -   4065304 C-C---C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       5999 3 -     70247 c-c---c
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105121 3 -    105689 t-c---t
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179720 3 +   5085361 t-c---t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22955 3 -     30710 T-C---C
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21862 3 -    147434 t-c---c
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102882 3 -    112863 t-c---t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171936 5 -    224448 --agatg
i Xerus_inauris.XerIna_scaffold_2302                     I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26535 3 -     86975 t-c---c
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1186 2 +      2695 --C---A
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 4 C 0
e Perognathus_longimembris.PerPac_flattened_line_28053       37455 0 +     38305 C
e Octodon_degus.JH651603.1                                11045117 4 -  11899542 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254 0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    96144 2 -    115145 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   2769 4 +     50838 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754 5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Loxodonta_africana.GL010049.1                           39077426 666 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2935  9 +     36723 C------TGG--CC------TTC
s Acinonyx_jubatus.LLWD01001279.1                           810466  9 +   1699592 c----tg--g--cc------ttc
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413203  9 +  29979442 c----tg--g--cc------ttg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15857 13 -     61208 G------AGT--CCTTGGTCT--
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45349  9 +     53615 c------tgg--cc------ttc
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41270  9 +     44087 C------TGG--CC------TTC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13910  9 -     21945 C------TGG--CC------TTC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15586  9 +     32033 C------TGG--CC------TTC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70039  9 -     84148 C------TGG--CC------TGC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42272  9 -     78289 C------TGG--CC------TGC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41718  9 +     55831 C------TGG--CC------TGC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40160  9 -     64179 C------TGG--CC------TGC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21806  9 -     24835 C------TGG--CC------TGC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38789  9 +     45454 C------TGG--CC------TGC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44487  9 +     70886 C------TGG--CC------TGC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6612  9 +     30854 C------TGG--CC------TGC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30751  9 +     42133 C------TGG--CC------TGC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174523  9 -    412891 t--------tggcc------ttc
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48566  9 -     65372 C------TGG--CC------TGC
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42313  9 +     43593 C------TGG--CC------TGC
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670326  9 +   5030052 C------TGG--CC------TGC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21968  9 -     23494 C------TGG--CC------TGC
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7104  9 +      8415 C------TGG--CC------TGC
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13869  9 -     32367 c------tga--tc------ttc
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18170  8 -     45910 ATGGCCTT---------------
i Arctocebus_calabarensis.k141_1364444                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2808  9 -     15198 t--------tggcc------ctc
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272550  9 +  21539123 C------TGG--CC------TGC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8717  9 +     48076 C------TGG--CC------TGC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3854  9 -     28759 C------TGG--CC------TGC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31407  9 +     44353 C------TGG--CC------TGC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46778  9 -     71267 C------TGG--CC------TGC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20837  9 -     33135 C------TGG--CC------TGC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4025  9 +     11645 c------tgg--cc------ttc
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4026  9 -     19611 c------tgg--cc------ttc
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5740  9 +     28062 C------TGT--CC------TGC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41034  9 -     91139 C------TGT--CC------TGC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18560  9 +     95584 C------TGT--CC------TGC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18473  9 +    119600 C------TGT--CC------TGC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7957  9 +     18648 C------TGG--CC------TGC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7620  9 -     13885 C------TGG--CC------TGC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16318  9 +     17162 C------TGG--CG------TGC
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451273  9 + 189096842 C------TGG--CG------TGC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17566  9 -     18408 C------TGG--CG------TGC
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503252  9 +  60362399 c----tg--g--cc------ttt
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6888  9 -     23171 c----tg--g--cc------ttt
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220231  9 +   9314153 CTG------G--CC------TTT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613366  9 +  59632846 c----tg--g--cc------ttt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104947  9 -  63665305 c----tg--g--cc------ttt
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268094  9 +    496798 C------TGG--CT------TTC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2879  9 +      5315 t--------tggcc------ttc
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993791 11 +  23392119 t------tgtgggc------ttt
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997233 11 +  23407841 t------tgtgggc------ttt
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60334 11 -     66877 T------TGTGGGC------TTT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2852  9 -     12580 C------TGG--CC------TGC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40738  9 +     53515 C------TGG--CC------TGC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368945  9 -  26074798 C------TGG--CC------TGC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5834  9 -     34880 C------TGG--CC------TGC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64929  9 -     89041 C------TGG--CC------TGC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1266  9 -      1636 C------TGG--CT------TTC
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489988  9 -  27778364 c----tg--g--cc------ttc
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16821  9 +     27315 c----tg--g--cc------ttc
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138509  9 -   4669795 C------TGG--CC------TTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42249  9 +     47900 C------TGG--CC------TTC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42082  9 -     44860 C------TGG--CC------ATC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42065  9 -    148725 C------TGG--CC------TTC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25163  9 -     40656 C------TGG--CC------TTC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5132  9 +     20796 C------TGG--CC------TTC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9322  9 -     17524 C------TGG--CC------TTC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25044  9 -     34525 C------TGG--CC------TTC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9753  9 -     25376 C------TGG--CC------TTC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362352  9 -  39242232 C------TGG--CC------TTC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268060  9 +  21565898 C------TGG--CC------TTC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29521  9 -     45857 C------TGG--CC------TTC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25341  9 -     32606 C------TGG--CC------TTC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1494  9 +      8499 C------TGG--CC------TTC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23013  9 +     70610 C------TGG--CC------TTC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19938  9 +     36323 C------TGG--CC------TTC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10635  9 -     19938 c------tag--cc------ttc
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28459  9 -     33796 C------TGG--CC------TTC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2989  9 -     15404 c------tgg--cc------ttc
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6848  9 -     32913 C------TGG--CC------TGC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17261  9 -     40346 C------TGG--CC------TGC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17516  9 +    216457 C------TGG--CC------TGC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17309  9 +     39636 C------TGG--CC------TGC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1688  9 +      5346 C------TGG--CC------TGC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40380  9 -    112038 C------TGT--CC------TGC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5952  9 +     34062 C------TGT--CC------TGC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340835  9 +  18827391 C------TGG--CC------TTC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7380  9 -     44032 C------TGG--CC------TTC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302160  9 - 135778131 C------TGG--CC------TTC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406614  9 -   2368649 C------TGG--CC------CTC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376490  9 - 200372422 c------tgg--cc------ctc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                 39  9 -     84244 C------TGG--CC------CTC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805106  9 +  53390261 c--------cagcc------ttc
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           571  9 -      8242 t--------tggct------ctt
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40134  9 -     83289 G------AGT--CT------CTG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112327  1 - 224834208 G----------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 17
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1742  9 +     87169 c----tg--g--cc------ttc
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642676  9 -   1526836 C------AGT--CC------TTC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2773 11 +     50838 T------TGTGGAC------ATC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 4 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1416 11 +     36344 T------TGTGGAC------TTC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2107966  9 -   2246927 c------ttg--cc------ttc
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290406  9 +  12879189 c------tgg--cc------ttc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862544  9 -  20541912 t--------tggcc------ttc
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662280  9 -   1390856 c----tg--g--cc------ttc
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137065  9 -    198055 c----tg--g--cc------ttc
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96146 11 -    115145 T------TGTGGAC------TTC
i Dinomys_branickii.DinBra_scaffold_10381                I 2 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7737 11 +     14636 t------tgtggac------ttc
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851488  8 - 111700974 c------ata--tg------gg-
i Echinops_telfairi.JH980293.1                           C 0 I 405
s Eidolon_helvum.AWHC01266696.1                               4112  9 +     19438 t--------tggtt------ttc
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105129  9 -  10337057 g------ttg--ta------ttt
i Elephantulus_edwardii.JH947257.1                       C 0 I 176
s Ellobius_lutescens.LOEQ01008920.1                          28341  9 +    110024 G------ACT--TT------TTC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10305  9 +     18970 T------ACT--CT------TTC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913783  9 +  41312741 c----tg--g--cc------ttg
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576178  9 +  14770903 t--------tggtt------ttc
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039261  9 -   4378816 c----tg--g--cc------ttc
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373195  9 +  39960074 c----tg--g--cc------ttc
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              409981  9 -    498745 c----tg--g--cc------ttc
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260358  9 +  21539334 C------TGG--CC------TTC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186244372  9 - 206538554 c----tg--g--cc------ttc
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114158  9 - 205367284 CTG------G--CC------TTC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25261  9 -     30238 c----tg--g--cc------ttc
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122181  1 -    137831 ----------------------C
i Galago_moholi.ctg3793                                  I 2 C 0
s Galago_senegalensis.k141_991736                             5721  1 +     22493 ----------------------C
i Galago_senegalensis.k141_991736                        I 2 C 0
s Galagoides_demidoff.k141_561628                            17763  1 -     32986 ----------------------c
i Galagoides_demidoff.k141_561628                        I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16878  9 +     18121 c------tgg--ct------ttc
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               3272  9 -      8343 C------TGG--CC------TTC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 68744  9 +  33314783 c------tgg--cc------ttc
i Gorilla_gorilla.LT578336.1                             I 552 I 56
s Helogale_parvula.HelPar_flattened_line_2585                28246  9 -    327341 c----tg--g--cc------ttc
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1924845 11 -  22651954 t------tgtggtc------ttc
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548017  9 -   1711038 g--------tggct------ttc
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47333  9 +     49977 g--------tggct------ttc
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140276  9 -    630532 C------TGG--CC------TTC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66729  9 +     83186 CTG------G--CA------TTC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69087 11 +    143317 T------TGTGGAC------TTC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3311  9 +     12352 C------TGG--CC------TTC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10494  9 +     55766 C------TGG--CC------TTC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050090  9 + 191637585 C------TGG--CC------TTC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798968  9 +  11177569 C------TGG--CC------TTC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384607  9 +   7955117 C------TGG--AC------TTC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     145  9 +     11955 C------TGG--CC------TTC
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237016 15 +   9596543 g------agt--ccttagtcttt
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41093  9 +    110728 A------TGG--CC------TGC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    28892  9 -     49555 T--------TGGTT------TTC
i Lasiurus_borealis.LasBor_scaffold_26245                I 389 I 105
s Leontocebus_fuscicollis.k141_2994775                        1773  9 -     13097 C------TGG--CC------TGC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1724  9 +      5940 C------TGG--CC------TGC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1355  9 -      5717 C------TGG--CC------TGC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7967  9 -     11567 C------TGG--CC------TGC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9348  9 -     12945 C------TGG--CC------TGC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6815  9 +     29618 C------TGG--CC------TTC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6812  9 +     31569 C------TGG--CC------TTC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6822  9 +     24756 c------tgg--cc------ttc
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6816  9 +     16388 C------TGG--CC------TTC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811133  9 -   3914936 c----tg--g--cc------ttg
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               330462  9 -   1826925 C------TGG--CC------TTC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7952  8 +     19643 CTGGCCTT---------------
i Loris_lydekkerianus.k141_2031736                       C 0 I 1
s Loris_tardigradus.ctg83                                  5041612  8 -   6120653 CTGGCCTT---------------
i Loris_tardigradus.ctg83                                C 0 I 1
s Loxodonta_africana.GL010049.1                           39078092  4 +  43346337 --------cg--tg---------
i Loxodonta_africana.GL010049.1                          I 666 C 0
s Lycaon_pictus.CM007581.1                                41612521  9 +  59628241 c----tg--g--cc------ttt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42779  9 -     61512 C------TGG--CC------TTC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370440  9 -  60120075 C------TGG--CC------TTC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22695  9 +     30207 C------AGG--CC------TTC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19798  9 -     24934 C------AGG--CC------TTC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22647  9 +     30527 C------AGG--CC------TTC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33837  9 -     50087 C------TGG--CC------TTC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43608  9 +     51645 C------TGG--CC------TTC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412776  9 - 187317192 C------AGG--CC------TTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              396999  9 +  25927173 C------TGG--CC------TTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46163  9 -     62418 C------TGG--CC------TTC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22818  9 +     24253 C------TGG--CC------TTC
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42639  9 +     59329 C------TGG--CC------TTC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268572  9 +    668171 C------TGG--CC------TTC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19753  9 +     21031 C------TGG--CC------TTC
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  350  9 +     17132 C------TGG--CC------TTC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221078  9 -    270270 t--------tggtt------ttc
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319850  9 +  24302211 C------TGG--CC------TTC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354682  9 -    752769 C------TGG--CC------TTC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671362  9 -    737560 t----tg--t--ac------ttc
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218653  9 +    317179 t----tg--t--gc------ttt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498808  9 +  40650429 c------tgg--gc------ttc
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148271  9 +    207569 t--------tggct------ttt
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23652  9 -     74585 c----tg--g--cc------ttg
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46469  9 -    140813 G------AGT--CT------CTC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17426840  9 +  29670104 G------AGA--CT------CTC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 7729  9 +     17804 C------TGG--CC------TGC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8513  9 -     12984 C------TGG--CC------TGC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16464  9 -     26561 C------TGG--CC------TGC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982428  9 +  93316391 C------TGG--CC------ATC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    42577  8 +    145209 c------ata--tg------tg-
i Microgale_talazaci.MicTal_scaffold_6613                I 796 I 403
s Micronycteris_hirsuta.MicHir_scaffold_2233                182493  9 +    200668 t--------tggcc------ttc
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19877  9 -     27822 C------TGG--CC------TTC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6143  9 +     27589 c----tg--g--cc------ttg
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50223  9 -     62432 c------tgg--cc------atc
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176672  9 +    366855 T--------TGGCC------TTG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16001  9 -     63510 c----tg--g--cc------ttc
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36526  9 +     47283 t--------tggtt------ttc
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    237  9 +      5579 G------AGT--CT------CCC
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41682191  9 + 129401213 G------AGT--CT------CCC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39489804  9 + 130317789 G------AGT--CT------CCC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                             14352596  9 +  14710649 c----tg--g--cc------ttg
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790542  9 +  10118263 t--------tggtt------ttc
i Myotis_brandtii.KE162005.1                             C 0 I 21
s Myotis_davidii.KB100139.1                                4384947  9 +   6019432 t--------tggtt------ttc
i Myotis_davidii.KB100139.1                              C 0 I 2
s Myotis_lucifugus.GL429869.1                               380763  9 +   4330536 t--------tggtt------ttc
i Myotis_lucifugus.GL429869.1                            C 0 I 21
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117402  9 +    130748 t------ttg--cc------ttc
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26458  9 +     34575 C------TGG--CC------TTC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466530  9 -  31847680 c----tg--g--cc------ttg
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125453  9 -    149072 T--------TGGCT------TTC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51200  9 -    132029 C------TGG--CC------TTC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7295  9 -     16345 C------TGG--CC------TTC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13180  9 +     22201 C------TGG--CC------TTC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411464  9 -  22158432 C------TGG--CC------TTC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23578  9 -     54323 C------TGG--CC------TTC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196121  9 +   9404916 c----tg--g--cc------ttt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93633920  8 + 196305487 CTGGCCTT---------------
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_3846325                              678  8 -      3937 CTGGCCTT---------------
i Nycticebus_coucang.k141_3846325                        C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562170  8 - 199412804 CTGGCCTT---------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Octodon_degus.JH651603.1                                11045121 11 -  11899542 T------TGCAGAC------ttc
i Octodon_degus.JH651603.1                               I 4 C 0
s Odobenus_rosmarus.KB229312.1                             1449318  9 +   2017862 c----tg--g--cc------ttg
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90069  9 -    140218 G------ACT--CT------TTC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104909  9 +    107918 G------ATT--CT------CTT
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11195  9 -     14239 c------tta--tg------ttt
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37161  9 +    559221 c----tg--g--cc------ttt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37302  1 -     51505 ----------------------C
i Otolemur_crassicaudatus.k141_649260                    I 2 C 0
s Otolemur_garnettii.GL873799.1                             350316  1 +   1103335 ----------------------C
i Otolemur_garnettii.GL873799.1                          I 2 C 0
s Pan_troglodytes.CM009242.2                               1470288  9 - 189151597 C------TGG--CC------TTC
i Pan_troglodytes.CM009242.2                             I 3 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22082  9 -    230217 c----tg--g--cc------ttc
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459408  9 -  18783137 c----tg--g--cc------ttc
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970128  9 +   8748460 c----tg--g--cc------ttc
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240690  9 - 183742232 C------TGG--CC------TTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7154  9 +     21308 C------TGG--CC------TTC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288193  9 -  20919399 C------TGG--CC------TTC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19809  9 -     27687 C------TGG--CC------TTC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12945  9 +     16796 C------TGG--CC------TTC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19755  9 -     23640 C------TGG--CC------TTC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12727  9 +     78924 c----tg--a--cc------ttc
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23601  8 +     31479 CTGGCCTT---------------
i Perodicticus_ibeanus.k141_1921260                      C 0 I 1
s Perodicticus_potto.k141_1854441                            15961  8 -     24908 CTGGCCTT---------------
i Perodicticus_potto.k141_1854441                        C 0 I 1
s Peromyscus_maniculatus.KI615324.1                         244554  9 +  18517816 G------ACT--CT------CTC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29799 11 -     56120 T------CATTGAC------TTC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6609  9 +      7560 C------TGG--CC------TTC
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62317  9 -     63152 C------TGG--CC------TTC
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44916  9 +     45295 C------TGG--CC------TTC
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2594  9 +      5735 C------TGG--CC------TTC
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              701  9 +     22231 t--------tggtt------ttc
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62730  9 +    207309 C------TGG--CC------TGC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3826  9 -     25401 C------TGG--CC------TGC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29565  9 +     58159 C------TGG--CC------TGC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29841  9 +     63561 C------TGG--CC------TGC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29604  9 +     51148 C------TGG--CC------TGC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554573  9 -   4542175 C------TGG--CC------TGC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29588  9 +     51125 C------TGG--CC------TGC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6018  9 +     39866 C------TGG--CC------TGC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1103  9 -      9282 C------TGG--CC------TGC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40507  9 -     87950 C------TGG--CC------TGC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40900  9 -     88961 C------TGG--CC------TGC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5599  9 -     39403 C------TGG--CC------TGC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40553  9 +     87928 C------TGG--CC------TGC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5596  9 -     60166 C------TGG--CC------TGC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12532  9 -     67232 C------TGG--CC------TGC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40448  9 -     90634 C------TGG--CC------TGC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41916  9 +     89403 C------TGG--CC------TGC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175428  9 - 189387572 C------TGG--CC------TTC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190246  9 -   9816681 C------TGG--CC------TTC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25091  9 +     69807 C------TGG--CC------TTC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42286  9 -     80239 c------tgg--cc------ttc
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563904  9 -   2598838 C------TGG--CC------TTC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1540  9 -      7103 c------tgg--cc------ttc
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2137  9 -     11706 c------tgg--cc------ttc
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5873  9 -     30655 c------tgg--cc------ttc
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32198  9 +     46564 c------tgg--cc------ttc
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92469  9 -     98465 c------tgg--cc------ttc
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6106  9 +     35169 c------tgg--cc------ttc
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34005  9 +     52041 G------AGT--CT------CTC
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49738  9 -     66298 t--------tggtc------ttc
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2374  9 -     18639 c----tg--g--cc------ttg
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838706  9 -  28871421 t--------tggtt------ttc
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535272  9 -   4952924 t--------tggtt------ttc
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096729  9 +  38429054 c----tg--g--cc------ttc
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24482  9 +     91421 C------TGG--CC------TTC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150975  9 -   7812017 C------TGG--CC------TTC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5352  9 +     72585 C------TGG--CC------TTC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020283  9 -  90668790 G------AGT--CT------CCC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911364  9 +   3329780 g--------cagtt------ttc
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26311  9 +     27361 c------tgg--cc------ttc
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119659  9 + 195417433 C------TGG--CC------TTC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233919  9 -   7961872 c------tgg--cc------ttc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72689  9 -    116970 t--------tggtt------ttc
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1686  9 +     27962 C------TGG--CC------TGC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1694  9 +      6077 C------TGG--CC------TGC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1713  9 +      5971 C------TGG--CC------TGC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1767  9 +      5932 C------TGG--CC------TGC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1912  9 -      2099 C------TGG--CC------TGC
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       389034  9 - 209938924 C------TGG--CC------TGC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1715  9 +      5979 C------TGG--CC------TGC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2081  9 -      4301 C------TGG--CC------TGC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236165  9 +   5703754 C------TGG--CC------TGC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5755  9 +     21866 C------TGG--CC------TGC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113899  9 +    313613 c--------tagcc------ttc
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22799  9 +     27374 C------TGG--CC------TTC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26318  9 +     58920 C------TGG--CC------TTC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12814  9 -     45317 C------TGG--CC------TTC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20472  9 -     42441 C------TGG--CC------TTC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23152  9 -     29113 C------TGG--CC------TTC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26221  9 -     48123 C------TGG--CC------GTC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46108  9 +     77746 G------TCT--CA------CTC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856209  7 -   1910179 g--------t--cc------ttt
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866176  9 +   3870691 C------TGG--GC------TTC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4372  9 -     97271 c----tg--g--cc------tgg
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122412  9 +    196729 c----tg--g--cc------ttc
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388436  9 +   1523678 C------TAG--CC------TTC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11515  9 +     22964 t--------tatct------ttc
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 520  9 +      5583 t------ttg--cc------ttc
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189241  9 +    199430 c----tg--g--cc------ttc
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103197  9 -    539355 c----tg--g--cc------ttc
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4786  9 +      6850 C------TGG--CT------TTC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4825  9 +     20590 C------TGG--CT------TTC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350676  9 - 186847797 C------TGG--CC------TTC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22127 11 -     33621 T------TGTCGAC------TTC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17643  9 -     31044 c------ttg--cc------ttc
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477555  9 -    610378 t--------tggcc------ttc
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18363  9 +     26378 C------TGG--CC------TTC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31047  9 -     78344 C------TGG--CC------TTC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17684  9 +     25722 C------TGG--CC------TTC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25909  9 -     62838 C------TGG--CC------TTC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26026  9 +     46913 C------TGG--CC------TTC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6834  9 -     28527 C------TGG--CC------TTC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27848  9 -     64340 C------TGG--CC------TTC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25885  9 -     63452 C------TGG--CC------TTC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7328  9 +     22490 C------TGG--CC------TTC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          756  9 -      6147 C------TGG--CC------TTC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7750  9 -     13050 c------tgg--cc------ttc
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252989  9 -   6242583 c------tgg--cc------ttc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58720  9 +     59866 C------TGG--CC------TTC
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831486  9 -   4065304 G------TGG--TC------TTT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6002  9 -     70247 a------tgg--tc------ttt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105124  9 -    105689 c--------tcatc------ttc
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179723  9 +   5085361 c----tg--g--cc------ttg
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22958  9 -     30710 C------TGG--CC------TTC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21865  9 -    147434 c------tgg--cc------ttC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102885  9 -    112863 c----tg--g--cc------ttt
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171941  9 -    224448 c------tgg--cc------ttg
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26538  9 -     86975 c----tg--g--cc------ttg
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1188 15 +      2695 G------AGT--TCCTAGTCTTC
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_28053       37455  0 +     38305 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254  0 -  37912305 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2944 2 +     36723 AG
s Acinonyx_jubatus.LLWD01001279.1                           810475 2 +   1699592 ag
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 18
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413212 2 +  29979442 ag
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 18
s Allenopithecus_nigroviridis.k141_3755588                   45358 2 +     53615 ag
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41279 2 +     44087 AG
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13919 2 -     21945 AG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15595 2 +     32033 AG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70048 2 -     84148 AG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42281 2 -     78289 AG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41727 2 +     55831 AG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40169 2 -     64179 AG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21815 2 -     24835 AG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38798 2 +     45454 AG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44496 2 +     70886 AG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6621 2 +     30854 AG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30760 2 +     42133 AG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174532 2 -    412891 ag
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 19
s Aotus_azarae.k141_118258                                   48575 2 -     65372 AG
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42322 2 +     43593 AG
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670335 2 +   5030052 AG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21977 2 -     23494 AG
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7113 2 +      8415 AG
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13878 2 -     32367 ag
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 18
s Arctocebus_calabarensis.k141_1364444                       18179 2 -     45910 AG
i Arctocebus_calabarensis.k141_1364444                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2817 2 -     15198 ag
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 19
s Ateles_geoffroyi_b.tarseq_1536                               272559 2 +  21539123 AG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8726 2 +     48076 AG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3863 2 -     28759 AG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31416 2 +     44353 AG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46787 2 -     71267 AG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20846 2 -     33135 AG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4034 2 +     11645 ag
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4035 2 -     19611 ag
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5749 2 +     28062 AG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41043 2 -     91139 AG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18569 2 +     95584 AG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18482 2 +    119600 AG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7966 2 +     18648 AG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7629 2 -     13885 AG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16327 2 +     17162 AG
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451282 2 + 189096842 AG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17575 2 -     18408 AG
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503261 2 +  60362399 ag
i CanFam4.chr16                                          C 0 I 19
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6897 2 -     23171 ag
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 19
s Canis_lupus_dingo.QKWQ01000480.1                          220240 2 +   9314153 AG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 19
s Canis_lupus_familiaris.chr16                            41613375 2 +  59632846 ag
i Canis_lupus_familiaris.chr16                           C 0 I 19
s Canis_lupus_orion.HG994398.1                            45104956 2 -  63665305 ag
i Canis_lupus_orion.HG994398.1                           C 0 I 19
s Carlito_syrichta.NW_007259797.1                           268103 2 +    496798 AG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2888 2 +      5315 ag
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 19
s Cavia_aperea.AVPZ01000300.1                              4993802 2 +  23392119 ga
i Cavia_aperea.AVPZ01000300.1                            C 0 I 18
s Cavia_porcellus.DS562891.1                               4997244 2 +  23407841 ga
i Cavia_porcellus.DS562891.1                             C 0 I 18
s Cavia_tschudii.CavTsc_scaffold_23560                       60345 2 -     66877 GA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 18
s Cebuella_niveiventris.k141_592277                           2861 2 -     12580 AG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40747 2 +     53515 AG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368954 2 -  26074798 AG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5843 2 -     34880 AG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64938 2 -     89041 AG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1275 2 -      1636 GG
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15489997 2 -  27778364 ag
i Ceratotherium_simum.JH767749.1                         C 0 I 18
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16830 2 +     27315 ag
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 18
s Cercocebus_atys.KQ010504.1                                138518 2 -   4669795 TG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42258 2 +     47900 TG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42091 2 -     44860 TG
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42074 2 -    148725 TG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25172 2 -     40656 AG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5141 2 +     20796 AG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9331 2 -     17524 AG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25053 2 -     34525 AG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9762 2 -     25376 AG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362361 2 -  39242232 AG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268069 2 +  21565898 AG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29530 2 -     45857 AG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25350 2 -     32606 AG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1503 2 +      8499 AG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23022 2 +     70610 AG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19947 2 +     36323 AG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10644 2 -     19938 ag
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 18
s Cheirogaleus_major.k141_666340                             28468 2 -     33796 AG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             2998 2 -     15404 ag
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6857 2 -     32913 AG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17270 2 -     40346 AG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17525 2 +    216457 AG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17318 2 +     39636 AG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1697 2 +      5346 AG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40389 2 -    112038 AG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5961 2 +     34062 AG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340844 2 +  18827391 AG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7389 2 -     44032 AG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302169 2 - 135778131 AG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406623 2 -   2368649 AG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376499 2 - 200372422 ag
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                 48 2 -     84244 Ag
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805115 2 +  53390261 ag
i Condylura_cristata.JH655891.1                          C 0 I 15
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           580 2 -      8242 ag
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 18
s Cricetomys_gambianus.CriGam_scaffold_14425                 40143 2 -     83289 TG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 17
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1751 2 +     87169 ag
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 18
s Ctenodactylus_gundi.CteGun_scaffold_65                    642685 2 -   1526836 AG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 17
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2784 2 +     50838 AA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 18
s Cuniculus_paca.CunPac_flattened_line_7025                   1427 2 +     36344 AA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 18
s Dasypus_novemcinctus.JH564415.1                          2107975 2 -   2246927 ag
i Dasypus_novemcinctus.JH564415.1                        C 0 I 18
s Daubentonia_madagascariensis.ctg71                        290415 2 +  12879189 gg
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862553 2 -  20541912 ag
i Desmodus_rotundus.KZ672289.1                           C 0 I 20
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662289 2 -   1390856 ag
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 18
s Diceros_bicornis.DicBicMic_scaffold_5955                  137074 2 -    198055 ag
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 18
s Dinomys_branickii.DinBra_scaffold_10381                    96157 2 -    115145 AA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 18
s Dolichotis_patagonum.DolPat_scaffold_80628                  7748 2 +     14636 ga
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 18
s Eidolon_helvum.AWHC01266696.1                               4121 2 +     19438 ag
i Eidolon_helvum.AWHC01266696.1                          C 0 I 18
s Elephantulus_edwardii.JH947257.1                         9105314 2 -  10337057 ag
i Elephantulus_edwardii.JH947257.1                       I 176 I 18
s Ellobius_lutescens.LOEQ01008920.1                          28350 2 +    110024 AG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 19
s Ellobius_talpinus.LOJH01026522.1                           10314 2 +     18970 AG
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 19
s Enhydra_lutris.KZ291758.1                               24913792 2 +  41312741 ag
i Enhydra_lutris.KZ291758.1                              C 0 I 19
s Eptesicus_fuscus.JH977646.1                             12576187 2 +  14770903 ag
i Eptesicus_fuscus.JH977646.1                            C 0 I 18
s Equus_asinus.JREZ01000139.1                              3039270 2 -   4378816 ag
i Equus_asinus.JREZ01000139.1                            C 0 I 19
s Equus_caballus.CM000403.2                               21373204 2 +  39960074 ag
i Equus_caballus.CM000403.2                              C 0 I 19
s Equus_przewalskii.KK951119.1                              409990 2 -    498745 ag
i Equus_przewalskii.KK951119.1                           C 0 I 19
s Erythrocebus_patas.Contig38                               260367 2 +  21539334 AG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186244381 2 - 206538554 ag
i Felis_catus.CM001381.2                                 C 0 I 18
s Felis_catus_fca126.CM031415.1                          185114167 2 - 205367284 AG
i Felis_catus_fca126.CM031415.1                          C 0 I 18
s Felis_nigripes.FelNig_flattened_line_31944                 25270 2 -     30238 ag
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 18
s Galago_moholi.ctg3793                                     122182 2 -    137831 AG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5722 2 +     22493 AG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17764 2 -     32986 ag
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16887 2 +     18121 ag
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 31
s Gorilla_beringei.k141_3358147                               3281 2 -      8343 AG
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252292 2 - 186649187 ag
i Gorilla_gorilla.LT578341.1                             I 9 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28255 2 -    327341 ag
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 18
s Heterocephalus_glaber.JH602082.1                         1924856 2 -  22651954 aa
i Heterocephalus_glaber.JH602082.1                       C 0 I 18
s Hipposideros_armiger.JXIK01000431.1                      1548026 2 -   1711038 ag
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 18
s Hipposideros_galeritus.HipGal_scaffold_23202               47342 2 +     49977 ag
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 18
s Hoolock_leuconedys.ctg274                                    140285 2 -    630532 AG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66738 2 +     83186 AG
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 18
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69098 2 +    143317 AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 142
s Hylobates_agilis.k141_1155965                               3320 2 +     12352 AG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10503 2 +     55766 AG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050099 2 + 191637585 AG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798977 2 +  11177569 AG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384616 2 +   7955117 AG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 14
s Indri_indri.k141_2415743                                     154 2 +     11955 AG
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237031 2 +   9596543 ga
i Jaculus_jaculus.JH725527.1                             C 0 I 18
s Lagothrix_lagothricha.k141_246028                          41102 2 +    110728 AG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59664 2 -     65777 ag
i Lasiurus_borealis.LasBor_scaffold_16567                I 9 I 20
s Leontocebus_fuscicollis.k141_2994775                        1782 2 -     13097 AG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1733 2 +      5940 AG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1364 2 -      5717 AG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7976 2 -     11567 AG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9357 2 -     12945 AG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6824 2 +     29618 AG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6821 2 +     31569 AG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6831 2 +     24756 ag
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6825 2 +     16388 AG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811142 2 -   3914936 ag
i Leptonychotes_weddellii.KB714746.1                     C 0 I 18
s Lophocebus_aterrimus.ctg367                               330471 2 -   1826925 CG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7961 2 +     19643 AG
i Loris_lydekkerianus.k141_2031736                       I 1 C 0
s Loris_tardigradus.ctg83                                  5041621 2 -   6120653 AG
i Loris_tardigradus.ctg83                                I 1 C 0
s Lycaon_pictus.CM007581.1                                41612530 2 +  59628241 ag
i Lycaon_pictus.CM007581.1                               C 0 I 19
s Macaca_arctoides.k141_1757516                              42788 2 -     61512 CG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370449 2 -  60120075 CG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22704 2 +     30207 CG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19807 2 -     24934 CG
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22656 2 +     30527 CG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33846 2 -     50087 TG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43617 2 +     51645 CG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412785 2 - 187317192 CG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397008 2 +  25927173 CG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46172 2 -     62418 CG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22827 2 +     24253 CG
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42648 2 +     59329 CG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268581 2 +    668171 TG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19762 2 +     21031 CG
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  359 2 +     17132 CG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221087 2 -    270270 ag
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 18
s Mandrillus_leucophaeus.scaffold280                        319859 2 +  24302211 CG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354691 2 -    752769 CG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671371 2 -    737560 ag
i Manis_javanica.JSZB01003497.1                          C 0 I 18
s Manis_pentadactyla.KN006162.1                             218662 2 +    317179 ag
i Manis_pentadactyla.KN006162.1                          C 0 I 18
s Marmota_marmota.CZRN01000018.1                           7498817 2 +  40650429 ag
i Marmota_marmota.CZRN01000018.1                         C 0 I 18
s Megaderma_lyra.MegLyr_scaffold_4542                       148280 2 +    207569 ag
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 18
s Mellivora_capensis.MelCap_flattened_line_19308             23661 2 -     74585 ag
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 19
s Meriones_unguiculatus.MerUng_scaffold_7390                 46478 2 -    140813 AG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 17
s Mesocricetus_auratus.KB708134.1                         17426849 2 +  29670104 AG
i Mesocricetus_auratus.KB708134.1                        C 0 I 19
s Mico_argentatus.k141_582562                                 7738 2 +     17804 AG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8522 2 -     12984 AG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16473 2 -     26561 AG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982437 2 +  93316391 AG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182502 2 +    200668 ag
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 19
s Miopithecus_ogouensis.k141_1534655                         19886 2 -     27822 AG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6152 2 +     27589 ag
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 18
s Mirza_zaza.k141_766280                                     50232 2 -     62432 ag
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176681 2 +    366855 AG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 19
s Mungos_mungo.MunMun_flattened_line_18455                   16010 2 -     63510 ag
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 18
s Murina_feae.MurFea_scaffold_17764                          36535 2 +     47283 ag
i Murina_feae.MurFea_scaffold_17764                      C 0 I 19
s Mus_caroli.FMAL02030609.1                                    246 2 +      5579 AG
i Mus_caroli.FMAL02030609.1                              C 0 I 15
s Mus_musculus.chr8                                       41682200 2 + 129401213 AG
i Mus_musculus.chr8                                      C 0 I 15
s Mus_spretus.CM004101.1                                  39489813 2 + 130317789 AG
i Mus_spretus.CM004101.1                                 C 0 I 15
s Mustela_putorius.JH418006.1                             14352605 2 +  14710649 ag
i Mustela_putorius.JH418006.1                            C 0 I 19
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117411 2 +    130748 ag
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 18
s Nasalis_larvatus.k141_1350636                              26467 2 +     34575 AG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466539 2 -  31847680 ag
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 18
s Noctilio_leporinus.NocLep_scaffold_7894                   125462 2 -    149072 AG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 18
s Nomascus_annamensis.k141_1771965                           51209 2 -    132029 AG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7304 2 -     16345 AG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13189 2 +     22201 AG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411473 2 -  22158432 AG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23587 2 -     54323 AG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196130 2 +   9404916 ag
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 19
s Nycticebus_bengalensis.LG01                             93633929 2 + 196305487 AG
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_3846325                              687 2 -      3937 AG
i Nycticebus_coucang.k141_3846325                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562179 2 - 199412804 AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Octodon_degus.JH651603.1                                11045132 2 -  11899542 aa
i Octodon_degus.JH651603.1                               C 0 I 18
s Odobenus_rosmarus.KB229312.1                             1449327 2 +   2017862 ag
i Odobenus_rosmarus.KB229312.1                           C 0 I 18
s Ondatra_zibethicus.OndZib_scaffold_7387                    90078 2 -    140218 AG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 19
s Onychomys_torridus.OnyTor_scaffold_2487                   104918 2 +    107918 AG
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 I 19
s Orycteropus_afer.OryAfe_flattened_line_171931              11204 2 -     14239 gg
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 18
s Otocyon_megalotis.JAEUCK010005147.1                        37170 2 +    559221 ag
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 19
s Otolemur_crassicaudatus.k141_649260                        37303 2 -     51505 AG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350317 2 +   1103335 AG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470297 2 - 189151597 AG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22091 2 -    230217 ag
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 18
s Panthera_pardus.KV860321.1                              18459417 2 -  18783137 ag
i Panthera_pardus.KV860321.1                             C 0 I 18
s Panthera_tigris.KE722367.1                               3970137 2 +   8748460 ag
i Panthera_tigris.KE722367.1                             C 0 I 18
s Papio_anubis.CM001495.2                                   240699 2 - 183742232 CA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7163 2 +     21308 CA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288202 2 -  20919399 CA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19818 2 -     27687 CG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12954 2 +     16796 CA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19764 2 -     23640 CA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12736 2 +     78924 ag
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 18
s Perodicticus_ibeanus.k141_1921260                          23610 2 +     31479 AG
i Perodicticus_ibeanus.k141_1921260                      I 1 C 0
s Perodicticus_potto.k141_1854441                            15970 2 -     24908 AG
i Perodicticus_potto.k141_1854441                        I 1 C 0
s Peromyscus_maniculatus.KI615324.1                         244563 2 +  18517816 AG
i Peromyscus_maniculatus.KI615324.1                      C 0 I 19
s Petromus_typicus.PetTyp_scaffold_17301                     29810 2 -     56120 AA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 18
s Piliocolobus_badius.k141_2495623                            6618 2 +      7560 AG
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62326 2 -     63152 AG
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44925 2 +     45295 AG
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2603 2 +      5735 AG
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              710 2 +     22231 ag
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 20
s Pithecia_albicans.k141_1239476                             62739 2 +    207309 AG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3835 2 -     25401 AG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29574 2 +     58159 AG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29850 2 +     63561 AG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29613 2 +     51148 AG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554582 2 -   4542175 AG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29597 2 +     51125 AG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6027 2 +     39866 AG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1112 2 -      9282 AG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40516 2 -     87950 AG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40909 2 -     88961 AG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5608 2 -     39403 AG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40562 2 +     87928 AG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5605 2 -     60166 AG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12541 2 -     67232 AG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40457 2 -     90634 AG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41925 2 +     89403 AG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175437 2 - 189387572 AG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190255 2 -   9816681 AG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25100 2 +     69807 AG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42295 2 -     80239 ag
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563913 2 -   2598838 AG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1549 2 -      7103 ag
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2146 2 -     11706 ag
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5882 2 -     30655 ag
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32207 2 +     46564 ag
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92478 2 -     98465 ag
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6115 2 +     35169 ag
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34014 2 +     52041 AG
i Psammomys_obesus.NESX01036366.1                        C 0 I 17
s Pteronotus_parnellii.KE847780.1                            49747 2 -     66298 ag
i Pteronotus_parnellii.KE847780.1                        C 0 I 19
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2383 2 -     18639 ag
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 18
s Pteropus_alecto.KB030862.1                               5838715 2 -  28871421 ag
i Pteropus_alecto.KB030862.1                             C 0 I 18
s Pteropus_vampyrus.KN525825.1                             3535281 2 -   4952924 ag
i Pteropus_vampyrus.KN525825.1                           C 0 I 18
s Puma_concolor.QAVW01001104.1                            18096738 2 +  38429054 ag
i Puma_concolor.QAVW01001104.1                           C 0 I 18
s Pygathrix_cinerea.k141_1153803                             24491 2 +     91421 AG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150984 2 -   7812017 AG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5361 2 +     72585 AG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020292 2 -  90668790 AG
i Rattus_norvegicus.chr16                                C 0 I 17
s Rhinolophus_sinicus.LVEH01000134.1                       2911373 2 +   3329780 ag
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 15
s Rhinopithecus_bieti.k119_221883                            26320 2 +     27361 ag
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119668 2 + 195417433 AG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233928 2 -   7961872 ag
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72698 2 -    116970 ag
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 18
s Saguinus_bicolor.k141_1429097                               1695 2 +     27962 AG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1703 2 +      6077 AG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1722 2 +      5971 AG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1776 2 +      5932 AG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1921 2 -      2099 AG
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       389043 2 - 209938924 AG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1724 2 +      5979 AG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2090 2 -      4301 AG
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236174 2 +   5703754 AG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5764 2 +     21866 AG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113908 2 +    313613 ag
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 19
s Semnopithecus_entellus.k141_158471                         22808 2 +     27374 AG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26327 2 +     58920 AG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12823 2 -     45317 AG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20481 2 -     42441 AG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23161 2 -     29113 AG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26230 2 -     48123 AG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46117 2 +     77746 AG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 19
s Solenodon_paradoxus.SolPar_flattened_line_126            1856216 2 -   1910179 gg
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 18
s Spermophilus_dauricus.KZ294078.1                         1866185 2 +   3870691 AG
i Spermophilus_dauricus.KZ294078.1                       C 0 I 14
s Spilogale_gracilis.SpiGra_flattened_line_13525              4381 2 -     97271 ag
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 18
s Suricata_suricatta.SurSur_flattened_line_6629             122421 2 +    196729 ag
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 18
s Symphalangus_syndactylus.tarseq_199                       388445 2 +   1523678 AG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11524 2 +     22964 ag
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 18
s Tamandua_tetradactyla.TamTet_scaffold_224794                 529 2 +      5583 ag
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 18
s Tapirus_indicus.TapInd_scaffold_7432                      189250 2 +    199430 ag
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 18
s Tapirus_terrestris.TapTer_scaffold_755                    103206 2 -    539355 ag
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 18
s Tarsius_lariang.k141_1780720                                4795 2 +      6850 AG
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4834 2 +     20590 AG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350685 2 - 186847797 CG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22138 2 -     33621 AA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 18
s Tolypeutes_matacus.TolMat_scaffold_31955                   17652 2 -     31044 ag
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 18
s Tonatia_saurophila.TonSau_scaffold_294                    477564 2 -    610378 ag
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 19
s Trachypithecus_auratus.k141_1189070                        18372 2 +     26378 AG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31056 2 -     78344 AG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17693 2 +     25722 AG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25918 2 -     62838 AG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26035 2 +     46913 AG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6843 2 -     28527 AG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27857 2 -     64340 AG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25894 2 -     63452 AG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7337 2 +     22490 AG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          765 2 -      6147 AG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7759 2 -     13050 ag
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             252998 2 -   6242583 ag
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58729 2 +     59866 AG
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831495 2 -   4065304 AG
i Tupaia_chinensis.KB320699.1                            C 0 I 18
s Tupaia_tana.TupTan_flattened_line_394                       6011 2 -     70247 ag
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 18
s Uropsilus_gracilis.UroGra_scaffold_7153                   105133 2 -    105689 ag
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 18
s Ursus_maritimus.KK499267.1                                179732 2 +   5085361 ag
i Ursus_maritimus.KK499267.1                             C 0 I 18
s Varecia_rubra.k141_787544                                  22967 2 -     30710 AG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21874 2 -    147434 AG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102894 2 -    112863 ag
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 19
s Xerus_inauris.XerIna_scaffold_2302                        171950 2 -    224448 ag
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 18
s Zalophus_californianus.ZalCal_flattened_line_17732         26547 2 -     86975 ag
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 18
s Zapus_hudsonius.ZapHud_scaffold_230229                      1203 2 +      2695 GA
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 18
e Perognathus_longimembris.PerPac_flattened_line_28053       37455 0 +     38305 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254 0 -  37912305 C
e Microgale_talazaci.MicTal_scaffold_6613                    42585 403 +    145209 I
e Echinops_telfairi.JH980293.1                            62851496 405 - 111700974 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3212 125 +      3929 I
e Myotis_lucifugus.GL429869.1                               380772 21 +   4330536 I
e Myotis_davidii.KB100139.1                                4384956 2 +   6019432 I
e Myotis_brandtii.KE162005.1                               9790551 21 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754 5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Loxodonta_africana.GL010049.1                           39078096 0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cricetulus_griseus.LT883664.1                          213112328 17 - 224834208 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    15870 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2946 13 +     36723 CCCTTTCT--------G-AAAT
s Acinonyx_jubatus.LLWD01001279.1                           810495 13 +   1699592 cacaatct--------g-aaat
i Acinonyx_jubatus.LLWD01001279.1                        I 18 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413232 13 +  29979442 cactatct--------g-aaat
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 18 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15870  9 -     61208 ----TTCT--------G-GAAG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45360 13 +     53615 ccctttct--------g-aaat
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41281 13 +     44087 CCCTTTCT--------G-AAAT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13921 13 -     21945 CCCTTTCT--------G-AAAT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15597 13 +     32033 CCCTTTCT--------G-AAAT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70050 13 -     84148 TACTTTCT--------G-AATT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42283 13 -     78289 TGCTTTCT--------G-AATT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41729 13 +     55831 TACTTTCT--------G-AATT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40171 13 -     64179 TACTTTCT--------G-AATT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21817 13 -     24835 TACTTTCT--------G-AATT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38800 13 +     45454 TACTTTCT--------G-AATT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44498 13 +     70886 TACTTTCT--------G-AATT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6623 13 +     30854 TACTTTCT--------G-AATT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30762 13 +     42133 TACTTTCT--------G-AATT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174553 13 -    412891 tacgttct--------g-aaat
i Anoura_caudifer.AnoCau_scaffold_1412                   I 19 C 0
s Aotus_azarae.k141_118258                                   48577 13 -     65372 CACTGTCT--------G-AATT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42324 13 +     43593 CACTGTCT--------G-AATT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670337 13 +   5030052 CACTGTCT--------G-AATT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21979 13 -     23494 CACTGTCT--------G-AATT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7115 13 +      8415 CACTGTCT--------G-AATT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13898 13 -     32367 cacagcct--------g-aaat
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 18 C 0
s Arctocebus_calabarensis.k141_1364444                       18181 13 -     45910 CATTTTTT--------G-AAAC
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2838 13 -     15198 tactttct--------g-aaat
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 19 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272561 13 +  21539123 CACTTTCT--------G-AATT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8728 13 +     48076 CACTTTCT--------G-AATT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3865 13 -     28759 CACTTTCT--------G-AATT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31418 13 +     44353 CACTTTCT--------G-AATT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46789 13 -     71267 CACTTTCT--------G-AATT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20848 13 -     33135 CACTTTCT--------G-AATT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4036 13 +     11645 cactttct--------g-aaat
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4037 13 -     19611 cactttct--------g-aaat
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5751 13 +     28062 CACTGTCT--------G-AATC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41045 13 -     91139 CACTGTCT--------G-AATC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18571 13 +     95584 CACTGTCT--------G-AATC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18484 13 +    119600 CACTGTCT--------G-AATC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7968 13 +     18648 CACTGTCT--------G-AATG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7631 13 -     13885 CACTGTCT--------G-AATG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16329 13 +     17162 CACTGTCT--------G-AATG
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451284 13 + 189096842 CACTGTCT--------G-AATG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17577 13 -     18408 CACTGTCT--------G-AATG
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503282 13 +  60362399 cactatct--------g-aaat
i CanFam4.chr16                                          I 19 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6918 13 -     23171 cactatct--------g-aaat
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 19 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220261 13 +   9314153 CACTATCT--------G-AAAT
i Canis_lupus_dingo.QKWQ01000480.1                       I 19 C 0
s Canis_lupus_familiaris.chr16                            41613396 13 +  59632846 cactatct--------g-aaat
i Canis_lupus_familiaris.chr16                           I 19 C 0
s Canis_lupus_orion.HG994398.1                            45104977 13 -  63665305 cactatct--------g-aaat
i Canis_lupus_orion.HG994398.1                           I 19 C 0
s Carlito_syrichta.NW_007259797.1                           268105 11 +    496798 TACATTCT--------G-AA--
i Carlito_syrichta.NW_007259797.1                        C 0 I 2
s Carollia_perspicillata.CarPer_scaffold_170178               2909 13 +      5315 tactttgt--------g-aact
i Carollia_perspicillata.CarPer_scaffold_170178          I 19 C 0
s Cavia_aperea.AVPZ01000300.1                              4993822 13 +  23392119 aatttttt--------g-aaag
i Cavia_aperea.AVPZ01000300.1                            I 18 C 0
s Cavia_porcellus.DS562891.1                               4997264 13 +  23407841 aatttttt--------g-aaag
i Cavia_porcellus.DS562891.1                             I 18 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60365 13 -     66877 AATTTTTT--------G-AAAG
i Cavia_tschudii.CavTsc_scaffold_23560                   I 18 C 0
s Cebuella_niveiventris.k141_592277                           2863 13 -     12580 CACTGTCT--------G-AATG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40749 13 +     53515 CACTGTCT--------G-AATG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368956 13 -  26074798 CGCTGTCT--------G-AATT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5845 13 -     34880 CGCTGTCT--------G-AATT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64940 13 -     89041 CGCTGTCT--------G-AATT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1277 11 -      1636 TACATTCT--------G-AA--
i Cephalopachus_bancanus.k141_72622                      C 0 I 2
s Ceratotherium_simum.JH767749.1                          15490017 13 -  27778364 cgttttct--------g-aaat
i Ceratotherium_simum.JH767749.1                         I 18 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16850 13 +     27315 cgttttct--------g-aaat
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 18 C 0
s Cercocebus_atys.KQ010504.1                                138520 13 -   4669795 CCCTTTCT--------G-AAAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42260 13 +     47900 CCCTTTCT--------G-AAAT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42093 13 -     44860 CCCTTTCT--------G-AAAT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42076 13 -    148725 CCCTTTCT--------G-AAAT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25174 13 -     40656 CCCTTTCT--------G-AAAT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5143 13 +     20796 CCCTTTCT--------G-AAAT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9333 13 -     17524 CCCTTTCT--------G-AAAT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25055 13 -     34525 CCCTTTCT--------G-AAAT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9764 13 -     25376 CCCTTTCT--------G-AAAT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362363 13 -  39242232 CCCTTTCT--------G-AAAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268071 13 +  21565898 CCCTTTCT--------G-AAAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29532 13 -     45857 CCCTTTCT--------G-AAAT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25352 13 -     32606 CCCTTTCT--------G-AAAT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1505 13 +      8499 CCCTTTCT--------G-AAAT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23024 13 +     70610 CCCTTTCT--------G-AAAT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19949 13 +     36323 CCCTTTCT--------G-AAAT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10664 13 -     19938 tgctttct--------g-aaat
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 18 C 0
s Cheirogaleus_major.k141_666340                             28470 13 -     33796 CACTTTCT--------G-AAAT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3000 13 -     15404 cactttct--------g-aaat
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6859 13 -     32913 CACTGTCT--------G-GATT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17272 13 -     40346 CACTGTCT--------G-GATT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17527 13 +    216457 CACTGTCT--------G-GATT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17320 13 +     39636 CACTGTCT--------G-GATT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1699 13 +      5346 CACTGTCT--------G-AGCG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40391 13 -    112038 CACTATCT--------G-AATC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           5963 13 +     34062 CACTGTCT--------G-AATC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340846 13 +  18827391 CCCTTTCT--------G-AAAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7391 13 -     44032 CCCTTTCT--------G-AAAT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302171 13 - 135778131 CCCTTTCT--------G-AAAT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406625 13 -   2368649 CCCTTTCT--------G-AAAT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376501 13 - 200372422 ccctttct--------g-aaat
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                 50 13 -     84244 ccctttct--------g-aaat
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805132 13 +  53390261 cactttct--------g-aaat
i Condylura_cristata.JH655891.1                          I 15 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           600 21 -      8242 cattttctgacttcctg-aaat
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 18 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40162 13 -     83289 TATTTTCT--------G-AAGT
i Cricetomys_gambianus.CriGam_scaffold_14425             I 17 C 0
s Cricetulus_griseus.LT883664.1                          213112345 13 - 224834208 TATTTTCT--------G-AAAT
i Cricetulus_griseus.LT883664.1                          I 17 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1771 13 +     87169 taccatca--------g-aaat
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 18 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642704 13 -   1526836 CACTTTAT--------G-AAAT
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 17 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2804 13 +     50838 CACTTTCT--------G-AACA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 18 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1447 13 +     36344 CACTTTCT--------G-AAAG
i Cuniculus_paca.CunPac_flattened_line_7025              I 18 C 0
s Dasypus_novemcinctus.JH564415.1                          2107995 13 -   2246927 cattttct--------g-caat
i Dasypus_novemcinctus.JH564415.1                        I 18 C 0
s Daubentonia_madagascariensis.ctg71                        290417 13 +  12879189 cagcttcc--------g-cgct
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862575 13 -  20541912 tactttct--------g-aaat
i Desmodus_rotundus.KZ672289.1                           I 20 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662309 13 -   1390856 cattttct--------g-aaat
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 18 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137094 13 -    198055 cattttct--------g-aaat
i Diceros_bicornis.DicBicMic_scaffold_5955               I 18 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96177 13 -    115145 CACTTTCT--------T-AGAG
i Dinomys_branickii.DinBra_scaffold_10381                I 18 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7768 13 +     14636 aactttct--------g-aaaG
i Dolichotis_patagonum.DolPat_scaffold_80628             I 18 C 0
s Eidolon_helvum.AWHC01266696.1                               4141 13 +     19438 cgctttct--------a-aaat
i Eidolon_helvum.AWHC01266696.1                          I 18 C 0
s Elephantulus_edwardii.JH947257.1                         9105334 12 -  10337057 AACTTT-T--------G-AAAT
i Elephantulus_edwardii.JH947257.1                       I 18 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28371 13 +    110024 TATTTTCT--------G-TTCT
i Ellobius_lutescens.LOEQ01008920.1                      I 19 C 0
s Ellobius_talpinus.LOJH01026522.1                           10335 13 +     18970 TATTTTCT--------G-TTCT
i Ellobius_talpinus.LOJH01026522.1                       I 19 C 0
s Enhydra_lutris.KZ291758.1                               24913813 13 +  41312741 cactatct--------g-aact
i Enhydra_lutris.KZ291758.1                              I 19 C 0
s Eptesicus_fuscus.JH977646.1                             12576207 13 +  14770903 cactttct--------g-aaat
i Eptesicus_fuscus.JH977646.1                            I 18 C 0
s Equus_asinus.JREZ01000139.1                              3039291 13 -   4378816 cactgtct--------g-aaat
i Equus_asinus.JREZ01000139.1                            I 19 C 0
s Equus_caballus.CM000403.2                               21373225 13 +  39960074 cactgtct--------g-aaat
i Equus_caballus.CM000403.2                              I 19 C 0
s Equus_przewalskii.KK951119.1                              410011 13 -    498745 cactgtct--------g-aaat
i Equus_przewalskii.KK951119.1                           I 19 C 0
s Erythrocebus_patas.Contig38                               260369 13 +  21539334 CCCTTTCT--------G-AAAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186244401 13 - 206538554 cacaatct--------g-aaat
i Felis_catus.CM001381.2                                 I 18 C 0
s Felis_catus_fca126.CM031415.1                          185114187 13 - 205367284 CACAATCT--------G-AAAT
i Felis_catus_fca126.CM031415.1                          I 18 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25290 13 -     30238 cacaatct--------g-aaat
i Felis_nigripes.FelNig_flattened_line_31944             I 18 C 0
s Galago_moholi.ctg3793                                     122184 13 -    137831 CATCCTCT--------G-AAAC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5724 13 +     22493 CATCCTCT--------G-AAAC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17766 13 -     32986 ccttctct--------g-aaac
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               4762 13 +      5976 cattttct--------g-aaat
i Galeopterus_variegatus.GalVar_scaffold_132127          I 64 I 42
s Gorilla_beringei.k141_3358147                               3283 13 -      8343 CTCTTTCT--------G-AAAT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252294 13 - 186649187 ccctttct--------g-aaat
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28275 13 -    327341 cactatcg--------g-aaat
i Helogale_parvula.HelPar_flattened_line_2585            I 18 C 0
s Heterocephalus_glaber.JH602082.1                         1924876 13 -  22651954 cactcttg--------g-aaag
i Heterocephalus_glaber.JH602082.1                       I 18 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548046 13 -   1711038 cactttct--------g-aaat
i Hipposideros_armiger.JXIK01000431.1                    I 18 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47362 13 +     49977 cactttct--------g-aaat
i Hipposideros_galeritus.HipGal_scaffold_23202           I 18 C 0
s Hoolock_leuconedys.ctg274                                    140287 13 -    630532 CCCTTTCT--------G-AAAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66758 13 +     83186 CATTCTCT--------G-AAGT
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 18 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69242 13 +    143317 AAGTTTCT--------G-ACAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 142 C 0
s Hylobates_agilis.k141_1155965                               3322 13 +     12352 ACCTTTCT--------G-AAAT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10505 13 +     55766 ACCTTTCT--------G-AAAT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050101 13 + 191637585 CCCTTTCT--------G-AAAT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798979 13 +  11177569 CCCTTTCT--------G-AAAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384632 10 +   7955117 ---tttct--------g-aaat
i Ictidomys_tridecemlineatus.JH393364.1                  I 14 C 0
s Indri_indri.k141_2415743                                     156 13 +     11955 CACTTTCT--------G-AAAT
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237051 13 +   9596543 cactttct--------g-gaat
i Jaculus_jaculus.JH725527.1                             I 18 C 0
s Lagothrix_lagothricha.k141_246028                          41104 13 +    110728 CACTTTCT--------G-AATT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59686 13 -     65777 cactttct--------g-aaat
i Lasiurus_borealis.LasBor_scaffold_16567                I 20 C 0
s Leontocebus_fuscicollis.k141_2994775                        1784 13 -     13097 CACTGTCT--------G-AACG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1735 13 +      5940 CACCGTCT--------G-AACG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1366 13 -      5717 CACCGTCT--------G-AACG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7978 13 -     11567 CACTGTCT--------G-AATG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9359 13 -     12945 CACTGTCT--------G-AATG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6826 13 +     29618 CATTTTCT--------G-AAAT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6823 13 +     31569 CATTTTCT--------G-AAAT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6833 13 +     24756 cattttct--------g-aaat
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6827 13 +     16388 CATTTTCT--------G-AAAT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811162 13 -   3914936 cactatct--------g-aaat
i Leptonychotes_weddellii.KB714746.1                     I 18 C 0
s Lophocebus_aterrimus.ctg367                               330473 13 -   1826925 CCCTTTCT--------G-AAAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7963 13 +     19643 CATTTTCT--------G-AACC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041623 13 -   6120653 CATTTTCT--------G-AACC
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612551 13 +  59628241 cactatct--------g-aaat
i Lycaon_pictus.CM007581.1                               I 19 C 0
s Macaca_arctoides.k141_1757516                              42790 13 -     61512 CCCTTTCT--------G-AAAT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370451 13 -  60120075 CCCTTTCT--------G-AAAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22706 13 +     30207 CCCTTTCT--------G-AAAT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19809 13 -     24934 CCCTTTCT--------G-AAAT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22658 13 +     30527 CCCTTTCT--------G-AAAT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33848 13 -     50087 CCCTTTCT--------G-AAAT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43619 13 +     51645 CCCTTTCT--------G-AAAT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412787 13 - 187317192 CCCTTTCT--------G-AAAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397010 13 +  25927173 CCCTTTCT--------G-AAAT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46174 13 -     62418 CCCTTTCT--------G-AAAT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22829 13 +     24253 CCCTTTCT--------G-AAAT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42650 13 +     59329 CCCTTTCT--------G-AAAT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268583 13 +    668171 CCCTTTCT--------G-AAAT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19764 13 +     21031 CCCTTTCT--------G-AAAT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  361 13 +     17132 CCCTTTCT--------G-AAAT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221107 13 -    270270 cactttct--------a-aaat
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 18 C 0
s Mandrillus_leucophaeus.scaffold280                        319861 13 +  24302211 CCCTTTCT--------G-AAAT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354693 13 -    752769 CCCTTTCT--------G-AAAT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671391 11 -    737560 cac--tct--------g-aaat
i Manis_javanica.JSZB01003497.1                          I 18 C 0
s Manis_pentadactyla.KN006162.1                             218682 13 +    317179 cactttct--------g-aaat
i Manis_pentadactyla.KN006162.1                          I 18 C 0
s Marmota_marmota.CZRN01000018.1                           7498837 13 +  40650429 tactttct--------g-aaat
i Marmota_marmota.CZRN01000018.1                         I 18 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148300 21 +    207569 cactttctgacttaatg-aaat
i Megaderma_lyra.MegLyr_scaffold_4542                    I 18 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23682 13 -     74585 cactctct--------g-aact
i Mellivora_capensis.MelCap_flattened_line_19308         I 19 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46497 13 -    140813 TGTTTTCT--------G-AAGT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 17 C 0
s Mesocricetus_auratus.KB708134.1                         17426870 13 +  29670104 TATTTTCT--------A-AAAT
i Mesocricetus_auratus.KB708134.1                        I 19 C 0
s Mico_argentatus.k141_582562                                 7740 13 +     17804 CACTGTCT--------G-AATG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8524 13 -     12984 CACTGTCT--------G-AATG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16475 13 -     26561 CACTGTCT--------G-AATG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982439 13 +  93316391 CACTTTCT--------G-AAAT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182523 13 +    200668 tactttct--------g-aaat
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 19 C 0
s Miopithecus_ogouensis.k141_1534655                         19888 13 -     27822 CCCTTTCT--------G-AAAT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6172 13 +     27589 cactatct--------g-aaat
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 18 C 0
s Mirza_zaza.k141_766280                                     50234 13 -     62432 cactttct--------g-aaat
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176702 13 +    366855 CACTTTCT--------G-AAAT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 19 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16030 13 -     63510 ctctatgg--------g-aact
i Mungos_mungo.MunMun_flattened_line_18455               I 18 C 0
s Murina_feae.MurFea_scaffold_17764                          36556 13 +     47283 cactttct--------g-aaat
i Murina_feae.MurFea_scaffold_17764                      I 19 C 0
s Mus_caroli.FMAL02030609.1                                    263 13 +      5579 TGTTTTCT--------G-AAGT
i Mus_caroli.FMAL02030609.1                              I 15 C 0
s Mus_musculus.chr8                                       41682217 13 + 129401213 TATTTTCT--------G-AAGT
i Mus_musculus.chr8                                      I 15 C 0
s Mus_spretus.CM004101.1                                  39489830 13 + 130317789 TATTTTCT--------G-AAGT
i Mus_spretus.CM004101.1                                 I 15 C 0
s Mustela_putorius.JH418006.1                             14352626 13 +  14710649 cactatct--------g-aact
i Mustela_putorius.JH418006.1                            I 19 C 0
s Myotis_brandtii.KE162005.1                               9790572 13 +  10118263 cactttat--------g-aaat
i Myotis_brandtii.KE162005.1                             I 21 C 0
s Myotis_davidii.KB100139.1                                4384958 13 +   6019432 cactttat--------g-aaat
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                               380793 13 +   4330536 cactttat--------g-aaat
i Myotis_lucifugus.GL429869.1                            I 21 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3337 13 +      3929 cactttat--------G-AAAT
i Myotis_myotis.MyoMyo_scaffold_185951                   I 125 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117431 13 +    130748 cactctct--------g-aaat
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 18 C 0
s Nasalis_larvatus.k141_1350636                              26469 13 +     34575 CCCTTTCT--------G-AAAT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466559 13 -  31847680 cactatct--------g-aaat
i Neomonachus_schauinslandi.NINY01007730.1               I 18 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125482 13 -    149072 CACATTCT--------G-AAAT
i Noctilio_leporinus.NocLep_scaffold_7894                I 18 C 0
s Nomascus_annamensis.k141_1771965                           51211 13 -    132029 CCCTTTCT--------G-AAAT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7306 13 -     16345 CCCTTTCT--------G-AAGT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13191 13 +     22201 CCCTTTCT--------G-AAAT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411475 13 -  22158432 CCCTTTCT--------G-AAAT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23589 13 -     54323 CCCTTTCT--------G-AAAT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196151 13 +   9404916 cactatct--------g-aaat
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 19 C 0
s Nycticebus_bengalensis.LG01                             93633931 13 + 196305487 AATTTTCT--------G-AACC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              689 13 -      3937 AATTTTCT--------G-AACC
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562181 13 - 199412804 AATTTTCT--------G-AACC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11045152 13 -  11899542 CACTTTCT--------G-AAAA
i Octodon_degus.JH651603.1                               I 18 C 0
s Odobenus_rosmarus.KB229312.1                             1449347 13 +   2017862 cactatct--------g-aaat
i Odobenus_rosmarus.KB229312.1                           I 18 I 20
s Ondatra_zibethicus.OndZib_scaffold_7387                    90099 13 -    140218 TAGTTTCT--------G-TTCT
i Ondatra_zibethicus.OndZib_scaffold_7387                I 19 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104939 13 +    107918 TGTTTTCT--------G-AAAT
i Onychomys_torridus.OnyTor_scaffold_2487                I 19 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11224 13 -     14239 cactttct--------g-aaat
i Orycteropus_afer.OryAfe_flattened_line_171931          I 18 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37191 13 +    559221 cactatct--------g-aaat
i Otocyon_megalotis.JAEUCK010005147.1                    I 19 C 0
s Otolemur_crassicaudatus.k141_649260                        37305 13 -     51505 CATTCtct--------g-aaac
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350319 13 +   1103335 CATTCTCT--------G-AAAC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470299 13 - 189151597 CCCTTTCT--------G-AAAT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22111 13 -    230217 cacaatct--------g-aaat
i Panthera_onca.PanOnc_flattened_line_3271               I 18 C 0
s Panthera_pardus.KV860321.1                              18459437 13 -  18783137 cacaatct--------g-aaat
i Panthera_pardus.KV860321.1                             I 18 C 0
s Panthera_tigris.KE722367.1                               3970157 13 +   8748460 cacaatct--------g-aaat
i Panthera_tigris.KE722367.1                             I 18 C 0
s Papio_anubis.CM001495.2                                   240701 13 - 183742232 CCCTTTCT--------G-AAAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7165 13 +     21308 CCCTTTCT--------G-AAAT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288204 13 -  20919399 CCCTTTCT--------G-AAAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19820 13 -     27687 CCCTTTCT--------G-AAAT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12956 13 +     16796 CCCTTTCT--------G-AAAT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19766 13 -     23640 CCCTTTCT--------G-AAAT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12756 13 +     78924 cactatct--------g-aaat
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 18 C 0
s Perodicticus_ibeanus.k141_1921260                          23612 13 +     31479 CATTTTCT--------G-AAAA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            15972 13 -     24908 CATTTTCT--------G-AAAA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244584 13 +  18517816 TGTTTTCT--------C-AAAT
i Peromyscus_maniculatus.KI615324.1                      I 19 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29830 13 -     56120 CATTTTCT--------G-AAAG
i Petromus_typicus.PetTyp_scaffold_17301                 I 18 C 0
s Piliocolobus_badius.k141_2495623                            6620 13 +      7560 CCCTTTCT--------G-AAAT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62328 13 -     63152 CCCTTTCT--------G-AAAT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44927 13 +     45295 CCCTTTCT--------G-AAAT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2605 13 +      5735 CCCTTTCT--------G-AAAT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              732 13 +     22231 cactttct--------g-aaat
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 20 C 0
s Pithecia_albicans.k141_1239476                             62741 13 +    207309 CACTGTCT--------G-AATT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3837 13 -     25401 CACTGTCT--------G-AATC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29576 13 +     58159 CACTGTCT--------G-AATT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29852 13 +     63561 CACTGTCT--------G-AATT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29615 13 +     51148 CACTGTCT--------G-AATT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554584 13 -   4542175 CACTGTCT--------G-AATC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29599 13 +     51125 CACTGTCT--------G-AATT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6029 13 +     39866 CACTGTCT--------G-GATT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1114 13 -      9282 CACTGTCT--------G-GATT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40518 13 -     87950 CACTGTCT--------G-GATT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40911 13 -     88961 CACTGTCT--------G-GATT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5610 13 -     39403 CACTGTCT--------G-GATT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40564 13 +     87928 CACTGTCT--------G-GATT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5607 13 -     60166 CACTGTCT--------G-GATT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12543 13 -     67232 CACTGTCT--------G-GATT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40459 13 -     90634 CACTGTCT--------G-GATT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41927 13 +     89403 CACTGTCT--------G-GATT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175439 13 - 189387572 CCCTTTCT--------G-AAGT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190257 13 -   9816681 CCCTTTCT--------G-AAGT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25102 13 +     69807 CCCTTTCT--------G-AAAT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42297 13 -     80239 ccctttct--------g-aaat
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563915 13 -   2598838 CACTTTCT--------G-AAAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1551 13 -      7103 cactttct--------g-aaat
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2148 13 -     11706 cactttct--------g-aaat
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5884 13 -     30655 cactttct--------g-aaat
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32209 13 +     46564 cactttct--------g-aaat
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92480 13 -     98465 cactttct--------g-aaat
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6117 13 +     35169 cactttct--------g-aaat
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34033 13 +     52041 TATTTTCT--------G-AAGT
i Psammomys_obesus.NESX01036366.1                        I 17 C 0
s Pteronotus_parnellii.KE847780.1                            49768 13 -     66298 cactttct--------g-aaat
i Pteronotus_parnellii.KE847780.1                        I 19 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2403 13 -     18639 cactatct--------g-aact
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 18 C 0
s Pteropus_alecto.KB030862.1                               5838735 13 -  28871421 cattttct--------a-aaat
i Pteropus_alecto.KB030862.1                             I 18 C 0
s Pteropus_vampyrus.KN525825.1                             3535301 13 -   4952924 cactttct--------a-aaat
i Pteropus_vampyrus.KN525825.1                           I 18 C 0
s Puma_concolor.QAVW01001104.1                            18096758 13 +  38429054 cacaatct--------g-aaat
i Puma_concolor.QAVW01001104.1                           I 18 C 0
s Pygathrix_cinerea.k141_1153803                             24493 13 +     91421 CCCTTTCT--------G-AAAT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150986 13 -   7812017 CCCTTTCT--------G-AAAT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5363 13 +     72585 CCCTTTCT--------G-AAAT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020311 13 -  90668790 TATTTTCT--------G-AAGT
i Rattus_norvegicus.chr16                                I 17 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911390 13 +   3329780 cactttct--------g-aaat
i Rhinolophus_sinicus.LVEH01000134.1                     I 15 C 0
s Rhinopithecus_bieti.k119_221883                            26322 13 +     27361 ccctttct--------g-aaat
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119670 13 + 195417433 CCCTTTCT--------G-AAAT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233930 13 -   7961872 ccctttct--------g-aaat
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72718 13 -    116970 aactttct--------a-aaat
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 18 C 0
s Saguinus_bicolor.k141_1429097                               1697 13 +     27962 CACTGTCT--------G-AGCG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1705 13 +      6077 CACTGTCT--------G-AGCG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1724 13 +      5971 CACTGTCC--------G-AACA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1778 13 +      5932 CGCTGTCC--------G-AACG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1923 13 -      2099 CACTGTCT--------G-AGCG
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       389045 13 - 209938924 CACTCTCT--------G-AGCG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1726 13 +      5979 CACTGTCT--------G-AACG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2092 13 -      4301 CACTGTCT--------G-AGCG
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236176 13 +   5703754 CGCTGTCT--------G-AATT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5766 13 +     21866 CGCTGTCT--------G-AATT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113929 13 +    313613 cactttct--------g-aaat
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 19 C 0
s Semnopithecus_entellus.k141_158471                         22810 13 +     27374 CCCTTTCT--------G-AAAT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26329 13 +     58920 CCCTTTCT--------G-AAAT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12825 13 -     45317 CCCTTTCT--------G-AAAT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20483 13 -     42441 CCCTTTCT--------G-AAAT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23163 13 -     29113 CCCTTTCT--------G-AAAT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26232 13 -     48123 CCCTTTCT--------G-AAAT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46138 13 +     77746 TATTTTCT--------G-AAAT
i Sigmodon_hispidus.SigHis_scaffold_20193                I 19 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856236 13 -   1910179 ggctttct--------g-aaat
i Solenodon_paradoxus.SolPar_flattened_line_126          I 18 C 0
s Spermophilus_dauricus.KZ294078.1                         1866201 10 +   3870691 ---tttct--------g-aaat
i Spermophilus_dauricus.KZ294078.1                       I 14 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4401 13 -     97271 cattatct--------g-aaat
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 18 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122441 13 +    196729 cactatcg--------g-gaat
i Suricata_suricatta.SurSur_flattened_line_6629          I 18 C 0
s Symphalangus_syndactylus.tarseq_199                       388447 13 +   1523678 CCCTTTCT--------G-AAAT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11544 13 +     22964 cacggtct--------g-aaat
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 18 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 549 13 +      5583 cgctctct--------g-aaat
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 18 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189270 13 +    199430 cactttct--------g-aaat
i Tapirus_indicus.TapInd_scaffold_7432                   I 18 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103226 13 -    539355 cactttct--------g-aaat
i Tapirus_terrestris.TapTer_scaffold_755                 I 18 C 0
s Tarsius_lariang.k141_1780720                                4797 11 +      6850 TACATTCT--------G-AA--
i Tarsius_lariang.k141_1780720                           C 0 I 2
s Tarsius_wallacei.k141_226975                                4836 11 +     20590 TACATTCT--------G-AA--
i Tarsius_wallacei.k141_226975                           C 0 I 2
s Theropithecus_gelada.CM009954.1                           350687 13 - 186847797 CCCTTTCT--------G-AAAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22158 13 -     33621 CGTTTTCT--------G-AAAG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 18 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17672 13 -     31044 cagtttct--------g-aaat
i Tolypeutes_matacus.TolMat_scaffold_31955               I 18 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477585 13 -    610378 tactttct--------g-agat
i Tonatia_saurophila.TonSau_scaffold_294                 I 19 C 0
s Trachypithecus_auratus.k141_1189070                        18374 13 +     26378 CCCTTTCT--------G-AAAT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31058 13 -     78344 CCCTTTCT--------G-AAAT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17695 13 +     25722 CCCTTTCT--------G-AAAT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25920 13 -     62838 CCCTTTCT--------G-AAAT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26037 13 +     46913 CCCTTTCT--------G-AAAT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6845 13 -     28527 CCCTTTCT--------G-AAAT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27859 13 -     64340 CCCTTTCT--------G-AAAT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25896 13 -     63452 CCCTTTCT--------G-AAAT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7339 13 +     22490 CCCTTTCT--------G-AAAT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          767 13 -      6147 CCCTTTCT--------G-AAAT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7761 13 -     13050 ccctttct--------g-aaat
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253000 13 -   6242583 ccctttct--------g-aaat
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58731 13 +     59866 CCCTTTCT--------G-AAAT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831515 14 -   4065304 tactttaa--------aaaaat
i Tupaia_chinensis.KB320699.1                            I 18 I 275
s Tupaia_tana.TupTan_flattened_line_394                       6031 14 -     70247 tactttca--------aaaaat
i Tupaia_tana.TupTan_flattened_line_394                  I 18 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105153 13 -    105689 cactttct--------g-aaat
i Uropsilus_gracilis.UroGra_scaffold_7153                I 18 C 0
s Ursus_maritimus.KK499267.1                                179752 13 +   5085361 cactatct--------g-aaat
i Ursus_maritimus.KK499267.1                             I 18 C 0
s Varecia_rubra.k141_787544                                  22969 13 -     30710 CACTTTCA--------G-AAAT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21876 13 -    147434 CACTTTCA--------G-AAAT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102915 13 -    112863 cactatct--------g-aaat
i Vulpes_lagopus.VulLag_flattened_line_12041             I 19 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171970 13 -    224448 tactttct--------g-aaat
i Xerus_inauris.XerIna_scaffold_2302                     I 18 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26567 13 -     86975 cactatct--------g-aaac
i Zalophus_californianus.ZalCal_flattened_line_17732     I 18 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1223 13 +      2695 GACTTTCT--------G-GAAT
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 18 C 0
e Perognathus_longimembris.PerPac_flattened_line_28053       37455  0 +     38305 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254  0 -  37912305 C
e Microgale_talazaci.MicTal_scaffold_6613                    42585 403 +    145209 I
e Echinops_telfairi.JH980293.1                            62851496 405 - 111700974 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Loxodonta_africana.GL010049.1                           39078096  0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2959 19 +     36723 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
s Acinonyx_jubatus.LLWD01001279.1                           810508 14 +   1699592 cgg-cc-ac-c--a------c-tg-------------------tg------------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413245 14 +  29979442 cag-tc-at-c--a------c-tg-------------------tg------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15879 19 -     61208 TAG-CT-AC-T--A------C-T--------G--T-------G--CC-------------------TTT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45373 15 +     53615 cag-cc-ac-c--a------c-tg-------------------tgc-----------------------
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41294 19 +     44087 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13934 19 -     21945 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15610 19 +     32033 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70063 19 -     84148 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42296 19 -     78289 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41742 19 +     55831 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40184 19 -     64179 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21830 19 -     24835 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38813 19 +     45454 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44511 19 +     70886 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6636 19 +     30854 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30775 19 +     42133 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174566 14 -    412891 tat-cc-ac-c--a------t-tg-------------------ta------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48590 19 -     65372 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42337 19 +     43593 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670350 19 +   5030052 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              21992 19 -     23494 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7128 19 +      8415 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13911 19 -     32367 cag-ac-at-a--a------t-g----------------------ct----------------gctctc
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18194  9 -     45910 CAC-TC-AC-C--A-------------------------------------------------------
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2851 14 -     15198 cat-cc-ac-c--a------t-tg-------------------tg------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272574 19 +  21539123 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8741 19 +     48076 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3878 19 -     28759 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31431 19 +     44353 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46802 19 -     71267 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20861 19 -     33135 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4049 19 +     11645 cag-cc-ac-c--g------c-ta-------------------tgcc-------------------ttt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4050 19 -     19611 cag-cc-ac-g--g------c-ta-------------------tgct-------------------ttt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5764 19 +     28062 CAG-CC-AC-C--G------C-CG-------------------TGCC-------------------CTT
i Cacajao_ayresi.k141_96119                              C 0 I 7
s Cacajao_calvus.k141_89051                                  41058 19 -     91139 CAG-CC-AC-C--G------C-CG-------------------TGCC-------------------CTT
i Cacajao_calvus.k141_89051                              C 0 I 7
s Cacajao_hosomi.k141_81245                                  18584 19 +     95584 CAG-CC-AC-C--G------C-CG-------------------TGCC-------------------CTT
i Cacajao_hosomi.k141_81245                              C 0 I 7
s Cacajao_melanocephalus.k141_619699                         18497 19 +    119600 CAG-CC-AC-C--G------C-CG-------------------TGCC-------------------CTT
i Cacajao_melanocephalus.k141_619699                     C 0 I 7
s Callibella_humilis.k141_1233062                             7981 18 +     18648 CAG-CT-GC-C--A------C--G-------------------TGCC-------------------CCT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7644 18 -     13885 CAG-CT-GC-C--A------C--G-------------------TGCC-------------------CCT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16342 18 +     17162 CAG-CT-GC-C--A------C--G-------------------TGCC-------------------CCT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451297 18 + 189096842 CAG-CT-GC-C--A------C--G-------------------TGCC-------------------CCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17590 18 -     18408 CAG-CT-GC-C--A------C--G-------------------TGCC-------------------CCT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503295 14 +  60362399 cag-ct-ac-c--a------t-tg-------------------cg------------------------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6931 14 -     23171 cag-ct-ac-c--a------t-tg-------------------cg------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220274 14 +   9314153 CAA-CT-AC-C--A------T-TG-------------------CG------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613409 14 +  59632846 cag-ct-ac-c--a------t-tg-------------------cg------------------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45104990 14 -  63665305 cag-ct-ac-c--a------t-tg-------------------cg------------------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268118 12 +    496798 ----------C--A------C-TA-------------------TGCT-------------------CTT
i Carlito_syrichta.NW_007259797.1                        I 2 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2922 14 +      5315 cat-cc-gc-c--a------t-tg-------------------tg------------------------
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993835 17 +  23392119 caa-at-ac-t--a------t-t----------------------gt-----------------gc-ct
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997277 17 +  23407841 caa-at-ac-t--a------t-t----------------------gt-----------------gc-ct
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60378 17 -     66877 CAA-AT-AC-T--A------T-T----------------------GT-----GC-------------CT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2876 18 -     12580 CAG-CT-GC-C--A------C--G-------------------TGCC-------------------CCT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40762 18 +     53515 CAG-CT-GC-C--A------C--G-------------------TGCC-------------------CCT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368969 19 -  26074798 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5858 19 -     34880 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64953 19 -     89041 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1290 12 -      1636 ----------C--A------C-TA-------------------TGCT-------------------CTT
i Cephalopachus_bancanus.k141_72622                      I 2 C 0
s Ceratotherium_simum.JH767749.1                          15490030 14 -  27778364 cag-cc-ac-t--a------c-tg-------------------tg------------------------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16863 14 +     27315 cag-cc-ac-t--a------c-tg-------------------tg------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138533 19 -   4669795 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42273 19 +     47900 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42106 19 -     44860 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42089 19 -    148725 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25187 19 -     40656 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5156 19 +     20796 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9346 19 -     17524 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25068 19 -     34525 CAG-CC-GC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9777 19 -     25376 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362376 19 -  39242232 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268084 19 +  21565898 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29545 19 -     45857 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25365 19 -     32606 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1518 19 +      8499 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23037 19 +     70610 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19962 19 +     36323 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10677 13 -     19938 cag-c--ac-c--g------t-tg-------------------tg------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28483 19 -     33796 CAG-CC-AC-C--G------C-TA-------------------TGCC-------------------TTT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3013 19 -     15404 cag-cc-ac-c--g------c-ta-------------------tgcc-------------------ttt
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6872 13 -     32913 CAG-CC-TC-C--A------C-TG-------------------T-------------------------
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17285 13 -     40346 CAG-CC-TC-C--A------C-TG-------------------T-------------------------
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17540 13 +    216457 CAG-CC-TC-C--A------C-TG-------------------T-------------------------
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17333 13 +     39636 CAG-CC-TC-C--A------C-TG-------------------T-------------------------
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1712  9 +      5346 CAGCCC-AC-C----------------------------------------------------------
i Chiropotes_albinasus.k141_1946120                      C 0 I 7
s Chiropotes_israelita.k141_313004                           40404 19 -    112038 CAG-CC-AC-C--G------C-TG-------------------TGCC-------------------CTT
i Chiropotes_israelita.k141_313004                       C 0 I 7
s Chiropotes_sagulatus.k141_1113111                           5976 19 +     34062 CAG-CC-AC-C--G------C-TG-------------------TGCC-------------------CTT
i Chiropotes_sagulatus.k141_1113111                      C 0 I 7
s Chlorocebus_aethiops.ctg25                                340859 19 +  18827391 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7404 19 -     44032 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302184 19 - 135778131 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406638 10 -   2368649 CAG-CC-AC-C--A------c------------------------------------------------
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376514 10 - 200372422 cag-cc-ac-c--a------c------------------------------------------------
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                 63 10 -     84244 cag-cc-ac-c--a------c------------------------------------------------
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805145 14 +  53390261 cAA-TT-AC-C--A------C-TG-------------------TG------------------------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           621 14 -      8242 cag-cc-ac-t--a------c-tg-------------------tg------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40175 18 -     83289 CA--CC-AT-C--A------C-T----------------------CT-----GCC-----------CTT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112358 18 - 224834208 CA--AC-AG-T--A------C-A----------------------GT-----GC------T-----GTT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1784 14 +     87169 ctg-cc-at-c--a------c-tg-------------------tg------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642717 16 -   1526836 CAA-CC-AT-G--A------C-T----------------------TT-------------------CTT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2817 18 +     50838 CAA-CT-TC-T--A------G-T----------------------GT-----GC------------TCT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1460 18 +     36344 CAA-GT-AC-T--A------TCT----------------------GT-----GC-------------CT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108008 14 -   2246927 cag-cc-gc-c--g------t-tg-------------------tg------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290430 19 +  12879189 cag-cc-gc-t--g------c-tg-------------------tgcc-------------------ttg
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862588 14 -  20541912 cat-cc-ac-c--a------t-cg-------------------tg------------------------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662322 14 -   1390856 cag-cc-ac-t--a------c-tg-------------------tg------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137107 14 -    198055 cag-cc-ac-t--a------c-tg-------------------tg------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96190 18 -    115145 CAA-CT-AC-T--A------C-T----------------------GT-----GC------------CCT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7781 17 +     14636 CAA-AT-AC-T--A------T-T----------------------GT-----GC-------------TT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4154 14 +     19438 cag-gc-ac-t--a------c-tg-------------------tg------------------------
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105346 20 -  10337057 AAG-TC-AA-T--ACTGTGCC-TT-------------------TA------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28384 18 +    110024 CA--AA-AG-C--A------C-A----------------------GT-----GC------T-----CTT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10348 18 +     18970 CA--AA-AG-C--A------C-A----------------------GT-----GC------T-----CTT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913826 14 +  41312741 cag-cc-at-c--a------t-tg-------------------tg------------------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576220 14 +  14770903 cat-cc-ac-c--a------t-tg-------------------tg------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039304 13 -   4378816 cag-ct-a--c--a------c-tg-------------------tg------------------------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373238 13 +  39960074 cag-ct-a--c--a------c-tg-------------------tg------------------------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410024 13 -    498745 cag-ct-a--c--a------c-tg-------------------tg------------------------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260382 19 +  21539334 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186244414 14 - 206538554 cgg-cc-ac-c--a------c-tg-------------------tg------------------------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114200 14 - 205367284 CGG-CC-AC-C--A------C-TG-------------------TG------------------------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25303 14 -     30238 cgg-cc-ac-c--a------c-tg-------------------tg------------------------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122197  9 -    137831 CAC-TC-AC-C--A-------------------------------------------------------
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5737  9 +     22493 CAC-TC-AC-C--A-------------------------------------------------------
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17779  9 -     32986 cac-tc-ac-c--a-------------------------------------------------------
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16920 19 +     18121 cag-cc-ac-c--a------c-ca-------------------tgcc-------------------ctt
i Galeopterus_variegatus.GalVar_scaffold_74466           I 31 C 0
s Gorilla_beringei.k141_3358147                               3296 19 -      8343 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252307 19 - 186649187 cag-cc-ac-c--a------c-tg-------------------tgcc-------------------ttt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28288 14 -    327341 cgg-cc-ac-c--a------t-gg-------------------tg------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1924889 18 -  22651954 caa-ct-gc-t--a------c-t----------------------gt-----------------gccct
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548059 14 -   1711038 cag-cc-ac-t--a------c-tg-------------------tg------------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47375 14 +     49977 cag-cc-ac-t--a------c-tg-------------------tg------------------------
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140300 19 -    630532 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66771 14 +     83186 CGG-GC-AC-C--A------C-TG-------------------TG------------------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69255 17 +    143317 TAA-AT-AC-T--A------T-T----------------------GT-----GC-------------CT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3335 19 +     12352 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10518 19 +     55766 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050114 19 + 191637585 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7798992 19 +  11177569 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384642 19 +   7955117 caa-AC-AC-C--T------C-T----------------------CT-----GCC-----------CTT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     169 19 +     11955 CAG-CC-AC-C--G------C-TA-------------------TGCC-------------------TTT
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237064 19 +   9596543 taa-ct-ac-c--a------c-t-----------------gtg--cc-------------------ctt
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41117 19 +    110728 CTG-CC-AC-G--A------C-TG-------------------TGCC-------------------CTT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59699 14 -     65777 cat-cc-ac-c--a------t-tg-------------------tg------------------------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1797 18 -     13097 CAG-CC-GC-C--A------C--C-------------------TGCC-------------------CTC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1748 18 +      5940 CAG-CC-GC-C--A------C--C-------------------TGCC-------------------CTC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1379 18 -      5717 CAG-CC-GC-C--A------C--C-------------------TGCC-------------------CTC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     7991 18 -     11567 CAG-CT-GC-T--A------C--G-------------------TGCC-------------------CTT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9372 18 -     12945 CAG-CT-GC-T--A------C--G-------------------TGCC-------------------CTT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6839 19 +     29618 CAG-CC-AC-C--A------C-TA-------------------TGCC-------------------TTT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6836 19 +     31569 CAG-CC-AC-C--A------C-TA-------------------TGCC-------------------TTT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6846 19 +     24756 cag-cc-ac-c--a------c-ta-------------------tgcc-------------------ttt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6840 19 +     16388 CAG-CC-AC-C--A------C-TA-------------------TGCC-------------------TTT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811175 14 -   3914936 cag-cc-at-c--a------c-tg-------------------tg------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               330486 19 -   1826925 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7976  9 +     19643 CAC-GC-AC-C--A-------------------------------------------------------
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041636  9 -   6120653 CAC-GC-AC-C--A-------------------------------------------------------
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612564 14 +  59628241 cag-ct-ac-c--a------t-tg-------------------cg------------------------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42803 19 -     61512 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370464 19 -  60120075 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22719 19 +     30207 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19822 19 -     24934 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22671 19 +     30527 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33861 19 -     50087 CAG-CC-AC-C--A------C-CG-------------------TGCC-------------------TTT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43632 19 +     51645 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412800 19 - 187317192 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397023 19 +  25927173 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46187 19 -     62418 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22842 19 +     24253 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42663 19 +     59329 CAG-CC-AC-C--A------C-CG-------------------TGCC-------------------TTT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268596 19 +    668171 CAG-CC-AC-C--A------C-CG-------------------TGCC-------------------TTT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19777 19 +     21031 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  374 19 +     17132 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221120 14 -    270270 cag-cc-ac-t--a------c-tg-------------------tg------------------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319874 19 +  24302211 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354706 19 -    752769 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671402 14 -    737560 tgt-ac-at-c--a------t-tt-------------------ta------------------------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218695 14 +    317179 tgt-ac-at-c--a------t-tt-------------------ta------------------------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498850 19 +  40650429 cAA-AC-AC-C--A------C-T----------------------CT-----GCC-----------CTT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148321 15 +    207569 cag-ca-agtt--c------c-tg-------------------tg------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23695 14 -     74585 caa-cc-at-c--a------t-tg-------------------tg------------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46510 18 -    140813 CA--CT-AA-A--A------C-C----------------------CT-----G-------T---C-CTT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17426883 18 +  29670104 CA--GC-AG-T--A------A-A----------------------GT-----GC------T-----CTT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 7753 18 +     17804 CAG-CT-GC-C--A------C--G-------------------TGCC-------------------CCT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8537 18 -     12984 CAG-CT-GC-C--A------C--G-------------------TGCC-------------------CCT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16488 18 -     26561 CAG-CT-GC-C--A------C--G-------------------TGCC-------------------CCT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982452 19 +  93316391 CGG-CC-AC-C--G------C-TA-------------------TGCC-------------------TTT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182536 14 +    200668 cat-cc-ac-c--a------t-tg-------------------tc------------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19901 19 -     27822 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6185 14 +     27589 cag-cc-at-c--a------c-tg-------------------tg------------------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50247 19 -     62432 cgg-ct-ac-t--g------c-ta-------------------tgcc-------------------ttt
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176715 14 +    366855 CAT-CC-AC-C--A------T-TG-------------------TG------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16043 14 -     63510 cag-cc-ac-c--a------t-gg-------------------tg------------------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36569 14 +     47283 cat-cc-ac-c--a------t-tg-------------------tg------------------------
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    276 18 +      5579 CA--CT-GG-C--A------C-T----------------------TT-----GCC-----------ATT
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41682230 18 + 129401213 CA--CT-GG-C--A------C-T----------------------TT-----GCC-----------ATT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39489843 18 + 130317789 CA--CT-GG-C--A------C-T----------------------TT-----GCC-----------ATT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                             14352639 14 +  14710649 cag-cc-at-c--a------t-tg-------------------tg------------------------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790585 14 +  10118263 cat-cc-ac-c--a------t-nn-------------------nn------------------------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4384971 14 +   6019432 cat-cc-aa-c--a------t-tg-------------------tg------------------------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380806 11 +   4330536 cat-cc-ac-c--a------t-c----------------------------------------------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3350 14 +      3929 CAT-CC-AC-C--A------T-TG-------------------TG------------------------
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117444 14 +    130748 cag-c-tac-c--a------t-tg-------------------tg------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26482 38 +     34575 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466572 14 -  31847680 cag-cc-at-c--a------c-tg-------------------tg------------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125495 35 -    149072 CAT-CT-AC-CGCA------T-AGTTACAATGCCTACTACATCCG------------------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51224 19 -    132029 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7319 19 -     16345 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13204 19 +     22201 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411488 19 -  22158432 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23602 19 -     54323 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196164 14 +   9404916 cag-cc-ac-c--a------t-tg-------------------gg------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93633944  9 + 196305487 CAC-TC-AC-C--A-------------------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              702  9 -      3937 CAC-TC-AC-C--A-------------------------------------------------------
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562194  9 - 199412804 CAC-TC-AC-C--A-------------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11045165 18 -  11899542 CAA-CT-TT-T--A------C-T----------------------GT-----GC------------CCT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449380 14 +   2017862 cag-cc-at-c--a------c-ag-------------------tg------------------------
i Odobenus_rosmarus.KB229312.1                           I 20 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90112 18 -    140218 CA--AA-AG-C--A------C-A----------------------GT-----GC------T-----CTT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104952 18 +    107918 CA--AC-AA-T--A------T-G----------------------GT-----GC------T-----CTT
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11237 20 -     14239 cag-tc-at-c--attgtgcc-tg-------------------ta------------------------
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37204 14 +    559221 cag-cc-ac-c--a------t-tg-------------------gg------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37318  9 -     51505 cac-tc-gc-c--a-------------------------------------------------------
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350332  9 +   1103335 CAC-Tc-ac-c--a-------------------------------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470312 19 - 189151597 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22124 14 -    230217 cgg-cc-ac-c--a------c-tg-------------------tg------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459450 14 -  18783137 cgg-cc-ac-c--a------c-tg-------------------tg------------------------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970170 14 +   8748460 cgg-cc-ac-c--a------c-tg-------------------tg------------------------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240714 19 - 183742232 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7178 19 +     21308 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288217 19 -  20919399 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19833 19 -     27687 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12969 19 +     16796 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19779 19 -     23640 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12769 14 +     78924 tgg-cc-ac-c--a------c-tg-------------------tg------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23625  9 +     31479 CAC-TC-AC-C--A-------------------------------------------------------
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            15985  9 -     24908 CAC-TC-AC-C--A-------------------------------------------------------
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244597 18 +  18517816 CA--AC-AA-T--A------T-G----------------------GT-----GC------T-----CTT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29843 18 -     56120 CAG-CT-AA-C--A------C-T----------------------AT-----GC------------CTT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6633 19 +      7560 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62341 19 -     63152 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44940 19 +     45295 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2618 19 +      5735 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              745 14 +     22231 cat-tc-ac-c--a------t-tg-------------------tg------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62754 19 +    207309 CAG-CC-AC-T--G------C-GG-------------------TGCC-------------------CTT
i Pithecia_albicans.k141_1239476                         C 0 I 7
s Pithecia_chrysocephala.k141_785207                          3850 19 -     25401 CAG-CC-AC-C--G------C-GG-------------------TGCC-------------------CTT
i Pithecia_chrysocephala.k141_785207                     C 0 I 7
s Pithecia_hirsuta.k141_640380                               29589 19 +     58159 CAG-CC-AC-T--G------C-GG-------------------TGCC-------------------CTT
i Pithecia_hirsuta.k141_640380                           C 0 I 7
s Pithecia_mittermeieri.k141_1280039                         29865 19 +     63561 CAG-CC-AC-T--G------C-GG-------------------TGCC-------------------CTT
i Pithecia_mittermeieri.k141_1280039                     C 0 I 7
s Pithecia_pissinattii.k141_878371                           29628 19 +     51148 CAG-CC-AC-T--G------C-GG-------------------TGCC-------------------CTT
i Pithecia_pissinattii.k141_878371                       C 0 I 7
s Pithecia_pithecia.tarseq_165                              554597 19 -   4542175 CAG-CC-AC-C--G------C-GG-------------------TGCC-------------------CTT
i Pithecia_pithecia.tarseq_165                           C 0 I 7
s Pithecia_vanzolinii.k141_1369553                           29612 19 +     51125 CAG-CC-AC-T--G------C-GG-------------------TGCC-------------------CTT
i Pithecia_vanzolinii.k141_1369553                       C 0 I 7
s Plecturocebus_bernhardi.k141_2549090                        6042 13 +     39866 CAG-CC-TC-C--A------C-TG-------------------T-------------------------
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1127 13 -      9282 CAG-CC-TC-C--A------C-TG-------------------T-------------------------
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40531 13 -     87950 CAG-CC-TC-C--A------C-TG-------------------T-------------------------
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40924 13 -     88961 CAG-CC-TC-C--A------C-TG-------------------T-------------------------
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5623 13 -     39403 CAG-CC-TC-C--A------C-TG-------------------T-------------------------
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40577 13 +     87928 CAG-CC-TC-C--A------C-TG-------------------T-------------------------
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5620 13 -     60166 CAG-CC-TC-C--A------C-TG-------------------T-------------------------
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12556 13 -     67232 CAG-CC-TC-C--A------C-TG-------------------T-------------------------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40472 13 -     90634 CAG-CC-TC-C--A------C-TG-------------------T-------------------------
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41940 13 +     89403 CAG-CC-TC-C--A------C-TG-------------------T-------------------------
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175452 19 - 189387572 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190270 19 -   9816681 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25115 19 +     69807 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42310 19 -     80239 cag-cc-ac-c--a------c-tg-------------------tgcc-------------------ttt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563928 19 -   2598838 CAG-CC-AC-T--G------C-TA-------------------TGCC-------------------TTT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1564 19 -      7103 cag-cc-ac-c--g------c-ta-------------------tgcc-------------------ttt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2161 19 -     11706 cag-cc-ac-c--g------c-ta-------------------tgcc-------------------ttt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5897 19 -     30655 cag-cc-ac-c--g------c-ta-------------------tgcc-------------------ttt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32222 19 +     46564 cag-cc-ac-c--g------c-ta-------------------tgcc-------------------ttt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92493 19 -     98465 cag-cc-ac-t--g------c-ta-------------------tgcc-------------------ttt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6130 19 +     35169 cag-cc-ac-t--g------c-ta-------------------tgcc-------------------ttt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34046 18 +     52041 CA--CT-AA-C--A------C-T----------------------CT-----G-------T---C-CTT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49781 14 -     66298 cat-cc-ac-c--a------t-tg-------------------tg------------------------
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2416 14 -     18639 cac-cc-at-c--a------t-tg-------------------tg------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838748 14 -  28871421 cag-cc-ac-t--a------c-tg-------------------tg------------------------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535314 14 -   4952924 cag-cc-ac-t--a------c-tg-------------------tg------------------------
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096771 14 +  38429054 cgg-cc-ac-c--g------c-tg-------------------tg------------------------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24506 38 +     91421 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTATGCTTTT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  150999 38 -   7812017 CAG-CC-AC-T--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5376 38 +     72585 CAG-CC-AC-T--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020324 18 -  90668790 CA--CC-AA-C--A------C-T----------------------CT------C-AC---------CTT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911403 14 +   3329780 cag-cc-ac-t--a------c-ta-------------------tg------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26335 19 +     27361 cag-cc-ac-c--a------c-tg-------------------tgcc-------------------ttt
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119683 38 + 195417433 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACtgtgctttt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233943 19 -   7961872 cag-cc-ac-c--a------c-tg-------------------tgcc-------------------ttt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72731 14 -    116970 cag-cc-ac-t--a------c-gg-------------------tg------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1710 16 +     27962 CAG-C---C-C--A------C--C-------------------TGCC-------------------CTC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1718 16 +      6077 CAG-C---C-C--A------C--C-------------------TGCC-------------------CTC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1737 16 +      5971 CAG-C---C-C--A------C--C-------------------TGCC-------------------CTC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1791 16 +      5932 CAG-C---C-C--A------C--C-------------------TGCC-------------------CTC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1936 16 -      2099 CAG-C---C-C--A------C--C-------------------TGCC-------------------CTC
i Saguinus_labiatus.k141_1571581                         C 0 C 0
s Saguinus_midas.LG03                                       389058 16 - 209938924 CAG-C---C-C--A------C--C-------------------TGCC-------------------CTC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1739 16 +      5979 CAG-C---C-C--A------C--C-------------------TGCC-------------------CTC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2105 16 -      4301 CAG-C---C-C--A------C--C-------------------TGCC-------------------CTC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236189 19 +   5703754 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5779 19 +     21866 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------CTT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113942 14 +    313613 cag-tc-ac-c--a------c-tg-------------------tg------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22823 38 +     27374 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26342 38 +     58920 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12838 38 -     45317 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20496 38 -     42441 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23176 38 -     29113 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26245 38 -     48123 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46151 18 +     77746 CA--GC-AA-T--G------T-G----------------------GT-----GC------T-----CTA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856249 14 -   1910179 cag-cc-ac-c--a------c-tg-------------------ta------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866211 19 +   3870691 caa-AC-AC-C--T------C-T----------------------CT-----GCC-----------CTT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4414 14 -     97271 cag-cc-gt-c--a------c-tc-------------------gg------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122454 14 +    196729 cag-cc-ac-c--a------t-gg-------------------tg------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388460 19 +   1523678 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11557 14 +     22964 cat-cc-ac-c--a------c-tg-------------------tg------------------------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 562 14 +      5583 cag-c-tac-c--a------a-tg-------------------tg------------------------
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189283 14 +    199430 cag-cc-ac-c--a------c-tg-------------------tg------------------------
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103239 14 -    539355 cag-cc-ac-C--A------G-TG-------------------TG------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4810 12 +      6850 ----------C--A------T-TA-------------------TGCT-------------------CTT
i Tarsius_lariang.k141_1780720                           I 2 C 0
s Tarsius_wallacei.k141_226975                                4849 12 +     20590 ----------C--A------T-TA-------------------TGCT-------------------CTT
i Tarsius_wallacei.k141_226975                           I 2 C 0
s Theropithecus_gelada.CM009954.1                           350700 19 - 186847797 CAG-CC-AC-C--A------C-TG-------------------TGCC-------------------TTT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22171 18 -     33621 CAA-CT-AT-T--A------T-A----------------------AT-----GC------------CCT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17685 13 -     31044 cag-c--ac-c--a------t-tg-------------------ca------------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477598 14 -    610378 cat-cc-ac-c--a------t-tg-------------------tg------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18387 38 +     26378 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31071 10 -     78344 CAG-CC-AC-C--A------C------------------------------------------------
i Trachypithecus_crepusculus.k141_539312                 C 0 I 9
s Trachypithecus_cristatus.k141_180416                       17708 38 +     25722 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25933 38 -     62838 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26050 38 +     46913 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6858 38 -     28527 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27872 38 -     64340 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25909 38 -     63452 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7352 38 +     22490 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          780 38 -      6147 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7774 10 -     13050 cag-cc-ac-c--a------c------------------------------------------------
i Trachypithecus_obscurus.k141_848057                    C 0 I 9
s Trachypithecus_phayrei.ctg124                             253013 10 -   6242583 cag-cc-ac-c--a------c------------------------------------------------
i Trachypithecus_phayrei.ctg124                          C 0 I 9
s Trachypithecus_pileatus.k141_2862967                       58744 38 +     59866 CAG-CC-AC-C--A------C-TG-------------------TGCCTTTAAGCCACCACTGTGCTTTT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831804 19 -   4065304 cag-ct-gc-c--A------C-TG-------------------TGCC-------------------CTT
i Tupaia_chinensis.KB320699.1                            I 275 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6045 19 -     70247 cag-cc-gc-c--a------c-cg-------------------tgcc-------------------ctt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105166 14 -    105689 cat-tc-ac-c--a------c-tg-------------------tg------------------------
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179765 14 +   5085361 cag-tc-at-c--a------c-tg-------------------tg------------------------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  22982 19 -     30710 CAG-CC-ac-c--g------c-ta-------------------tgcc-------------------ttt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              21889 19 -    147434 CAG-cc-ac-c--g------c-ta-------------------tgcc-------------------ttt
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102928 14 -    112863 cag-ct-ac-c--a------t-tg-------------------gg------------------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        171983 19 -    224448 caa-ac-ac-c--a------c-t----------------------ct----------------gccctt
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26580 14 -     86975 cag-cc-at-c--a------c-ag-------------------tg------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1236 20 +      2695 TAA-CT-AT-T--A------C-T---AC--TG-------------CC-------------------CTT
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_28053       37455  0 +     38305 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254  0 -  37912305 C
e Microgale_talazaci.MicTal_scaffold_6613                    42585 403 +    145209 I
e Echinops_telfairi.JH980293.1                            62851496 405 - 111700974 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Loxodonta_africana.GL010049.1                           39078096  0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2978 1 +     36723 A
s Allactaga_bullata.AllBul_scaffold_20030                    15898 1 -     61208 T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41313 1 +     44087 A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13953 1 -     21945 A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15629 1 +     32033 A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70082 1 -     84148 A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42315 1 -     78289 A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41761 1 +     55831 A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40203 1 -     64179 A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21849 1 -     24835 A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38832 1 +     45454 C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44530 1 +     70886 A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6655 1 +     30854 A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30794 1 +     42133 A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13930 1 -     32367 t
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272593 1 +  21539123 A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8760 1 +     48076 A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3897 1 -     28759 A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31450 1 +     44353 A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46821 1 -     71267 A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20880 1 -     33135 A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4068 1 +     11645 a
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4069 1 -     19611 a
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5790 1 +     28062 C
i Cacajao_ayresi.k141_96119                              I 7 C 0
s Cacajao_calvus.k141_89051                                  41084 1 -     91139 C
i Cacajao_calvus.k141_89051                              I 7 C 0
s Cacajao_hosomi.k141_81245                                  18610 1 +     95584 C
i Cacajao_hosomi.k141_81245                              I 7 C 0
s Cacajao_melanocephalus.k141_619699                         18523 1 +    119600 C
i Cacajao_melanocephalus.k141_619699                     I 7 C 0
s Carlito_syrichta.NW_007259797.1                           268130 1 +    496798 A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993852 1 +  23392119 t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997294 1 +  23407841 t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60395 1 -     66877 T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1302 1 -      1636 A
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138552 1 -   4669795 A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42292 1 +     47900 A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42125 1 -     44860 A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42108 1 -    148725 A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25206 1 -     40656 A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5175 1 +     20796 A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9365 1 -     17524 A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25087 1 -     34525 A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9796 1 -     25376 A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362395 1 -  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268103 1 +  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29564 1 -     45857 A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25384 1 -     32606 A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1537 1 +      8499 A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23056 1 +     70610 A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19981 1 +     36323 A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             28502 1 -     33796 A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3032 1 -     15404 a
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1728 1 +      5346 C
i Chiropotes_albinasus.k141_1946120                      I 7 C 0
s Chiropotes_israelita.k141_313004                           40430 1 -    112038 C
i Chiropotes_israelita.k141_313004                       I 7 C 0
s Chiropotes_sagulatus.k141_1113111                           6002 1 +     34062 C
i Chiropotes_sagulatus.k141_1113111                      I 7 C 0
s Chlorocebus_aethiops.ctg25                                340878 1 +  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7423 1 -     44032 A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302203 1 - 135778131 A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40193 1 -     83289 T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112376 1 - 224834208 T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642733 1 -   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2835 1 +     50838 T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1478 1 +     36344 T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290449 1 +  12879189 a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96208 1 -    115145 T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7798 1 +     14636 T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28402 1 +    110024 T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10366 1 +     18970 T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Erythrocebus_patas.Contig38                               260401 1 +  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16939 1 +     18121 g
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               3315 1 -      8343 A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252326 1 - 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1924907 1 -  22651954 T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    140319 1 -    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69272 1 +    143317 T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 5
s Hylobates_agilis.k141_1155965                               3354 1 +     12352 A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10537 1 +     55766 A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050133 1 + 191637585 A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799011 1 +  11177569 A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384661 1 +   7955117 T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     188 1 +     11955 A
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237083 1 +   9596543 t
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41136 1 +    110728 A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6858 1 +     29618 A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6855 1 +     31569 A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6865 1 +     24756 a
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6859 1 +     16388 A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               330505 1 -   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              42822 1 -     61512 A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370483 1 -  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22738 1 +     30207 A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19841 1 -     24934 A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22690 1 +     30527 A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33880 1 -     50087 A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43651 1 +     51645 A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412819 1 - 187317192 A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397042 1 +  25927173 A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46206 1 -     62418 A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22861 1 +     24253 A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42682 1 +     59329 A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268615 1 +    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19796 1 +     21031 A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  393 1 +     17132 A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319893 1 +  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354725 1 -    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498869 1 +  40650429 T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46528 1 -    140813 T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17426901 1 +  29670104 T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Microcebus_murinus.CM007674.1                           74982471 1 +  93316391 A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19920 1 -     27822 A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     50266 1 -     62432 a
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mus_caroli.FMAL02030609.1                                    294 1 +      5579 A
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41682248 1 + 129401213 T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39489861 1 + 130317789 T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Nomascus_annamensis.k141_1771965                           51243 1 -    132029 A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7338 1 -     16345 A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13223 1 +     22201 A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411507 1 -  22158432 A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23621 1 -     54323 A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Octodon_degus.JH651603.1                                11045183 1 -  11899542 T
i Octodon_degus.JH651603.1                               C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90130 1 -    140218 T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104970 1 +    107918 T
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Pan_troglodytes.CM009242.2                               1470331 1 - 189151597 A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   240733 1 - 183742232 A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7197 1 +     21308 A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288236 1 -  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19852 1 -     27687 A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12988 1 +     16796 A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19798 1 -     23640 A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244615 1 +  18517816 T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29861 1 -     56120 T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6652 1 +      7560 A
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62360 1 -     63152 A
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44959 1 +     45295 A
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2637 1 +      5735 A
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62780 1 +    207309 C
i Pithecia_albicans.k141_1239476                         I 7 C 0
s Pithecia_chrysocephala.k141_785207                          3876 1 -     25401 C
i Pithecia_chrysocephala.k141_785207                     I 7 C 0
s Pithecia_hirsuta.k141_640380                               29615 1 +     58159 C
i Pithecia_hirsuta.k141_640380                           I 7 C 0
s Pithecia_mittermeieri.k141_1280039                         29891 1 +     63561 C
i Pithecia_mittermeieri.k141_1280039                     I 7 C 0
s Pithecia_pissinattii.k141_878371                           29654 1 +     51148 C
i Pithecia_pissinattii.k141_878371                       I 7 C 0
s Pithecia_pithecia.tarseq_165                              554623 1 -   4542175 C
i Pithecia_pithecia.tarseq_165                           I 7 C 0
s Pithecia_vanzolinii.k141_1369553                           29638 1 +     51125 C
i Pithecia_vanzolinii.k141_1369553                       I 7 C 0
s Pongo_abelii.CM009266.2                                   175471 1 - 189387572 A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190289 1 -   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563947 1 -   2598838 A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1583 1 -      7103 a
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2180 1 -     11706 a
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5916 1 -     30655 a
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32241 1 +     46564 a
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92512 1 -     98465 a
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6149 1 +     35169 a
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34064 1 +     52041 T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Rattus_norvegicus.chr16                                 37020342 1 -  90668790 T
i Rattus_norvegicus.chr16                                C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46169 1 +     77746 T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866230 1 +   3870691 T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388479 1 +   1523678 A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                4822 1 +      6850 A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4861 1 +     20590 A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350719 1 - 186847797 A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22189 1 -     33621 T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831823 1 -   4065304 T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6064 1 -     70247 t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  23001 1 -     30710 a
i Varecia_rubra.k141_787544                              C 0 I 124
s Varecia_variegata.k141_289850                              21908 1 -    147434 a
i Varecia_variegata.k141_289850                          C 0 I 124
s Xerus_inauris.XerIna_scaffold_2302                        172002 1 -    224448 c
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1256 1 +      2695 T
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_28053       37455 0 +     38305 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3201 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948254 0 -  37912305 C
e Microgale_talazaci.MicTal_scaffold_6613                    42585 403 +    145209 I
e Echinops_telfairi.JH980293.1                            62851496 405 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              11257 0 -     14239 C
e Elephantulus_edwardii.JH947257.1                         9105366 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11862602 0 -  20541912 C
e Pygathrix_nigripes_a.k141_215492                              5414 0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  151037 0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             24544 0 +     91421 C
e Callibella_humilis.k141_1233062                             7999 0 +     18648 C
e Perodicticus_potto.k141_1854441                            15994 0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          23634 0 +     31479 C
e Otolemur_garnettii.GL873799.1                             350341 0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        37327 0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562203 0 - 199412804 C
e Nycticebus_coucang.k141_3846325                              711 0 -      3937 C
e Nycticebus_bengalensis.LG01                             93633953 0 + 196305487 C
e Loris_tardigradus.ctg83                                  5041645 0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            7985 0 +     19643 C
e Galagoides_demidoff.k141_561628                            17788 0 -     32986 C
e Galago_senegalensis.k141_991736                             5746 0 +     22493 C
e Galago_moholi.ctg3793                                     122206 0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       18203 0 -     45910 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17698 0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2108022 0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10690 0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     13679 3 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               2936 0 +      5315 C
e Zalophus_californianus.ZalCal_flattened_line_17732         26594 0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102942 0 -    112863 C
e Ursus_maritimus.KK499267.1                                179779 0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              4428 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2430 0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        37218 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1449394 0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                196178 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11466586 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14352653 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         6199 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23709 0 -     74585 C
e Lycaon_pictus.CM007581.1                                41612578 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        811189 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913840 0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45105004 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41613423 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          220288 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6945 0 -     23171 C
e CanFam4.chr16                                           42503309 0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  2865 0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20413259 0 +  29979442 C
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   105180 0 -    105689 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58782 0 +     59866 C
e Trachypithecus_phayrei.ctg124                             253023 9 -   6242583 I
e Trachypithecus_obscurus.k141_848057                         7784 9 -     13050 I
e Trachypithecus_melamera.k141_591572                          818 0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     7390 0 +     22490 C
e Trachypithecus_laotum.k141_928651                          25947 0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      27910 0 -     64340 C
e Trachypithecus_germaini.k141_57262                          6896 0 -     28527 C
e Trachypithecus_geei.k141_1001272                           26088 0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      25971 0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       17746 0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     31081 9 -     78344 I
e Trachypithecus_auratus.k141_1189070                        18425 0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    477612 0 -    610378 C
e Tapirus_terrestris.TapTer_scaffold_755                    103253 0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      189297 0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                 576 0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                11571 0 +     22964 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122468 0 +    196729 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1856263 0 -   1910179 C
e Semnopithecus_vetulus.k141_244474                          26283 0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     23214 0 -     29113 C
e Semnopithecus_priam.k141_714795                            20534 0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12876 0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      26380 0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22861 0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    113956 0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           5798 0 +     21866 C
e Sapajus_apella.ctg103                                     236208 0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Saguinus_oedipus.k141_1466288                               2121 0 -      4301 C
e Saguinus_mystax.k141_8077960                                1755 0 +      5979 C
e Saguinus_midas.LG03                                       389074 0 - 209938924 C
e Saguinus_labiatus.k141_1571581                              1952 0 -      2099 C
e Saguinus_inustus.k141_2469308                               1807 0 +      5932 C
e Saguinus_imperator.k141_1898058                             1753 0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             1734 0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1726 0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72745 0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             233962 0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104119721 0 + 195417433 C
e Rhinopithecus_bieti.k119_221883                            26354 0 +     27361 C
e Rhinolophus_sinicus.LVEH01000134.1                       2911417 0 +   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096785 0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3535328 0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5838762 0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            49795 0 -     66298 C
e Prolemur_simus.MPIZ01000396.1                            1980511 0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42329 0 -     80239 C
e Presbytis_comata.k141_1230337                              25134 0 +     69807 C
e Plecturocebus_moloch.k141_1031110                          41953 0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          40485 0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      12569 0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          5633 0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          40590 0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          5636 0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     40937 0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       40544 0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          1140 0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        6055 0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              759 0 +     22231 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12783 0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3970184 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18459464 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   22138 0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566 3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Noctilio_leporinus.NocLep_scaffold_7894                   125530 0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26520 0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117458 0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3364 0 +      3929 C
e Myotis_lucifugus.GL429869.1                               380817 0 +   4330536 C
e Myotis_davidii.KB100139.1                                4384985 0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9790599 0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754 5 +  89631738 I
e Murina_feae.MurFea_scaffold_17764                          36583 0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   16057 0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176729 0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182550 0 +    200668 C
e Mico_schneideri.k141_1877700                                     16506 0 -     26561 C
e Mico_humeralifer.k141_1180625                               8555 0 -     12984 C
e Mico_argentatus.k141_582562                                 7771 0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Megaderma_lyra.MegLyr_scaffold_4542                       148336 0 +    207569 C
e Manis_pentadactyla.KN006162.1                             218709 0 +    317179 C
e Manis_javanica.JSZB01003497.1                             671416 0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                221134 0 -    270270 C
e Loxodonta_africana.GL010049.1                           39078096 0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Leontopithecus_rosalia.k141_349454                          9390 0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     8009 0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        1397 0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           1766 0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        1815 0 -     13097 C
e Lemur_catta.scaffold_24                                 14757355 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59713 0 -     65777 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66785 0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_23202               47389 0 +     49977 C
e Hipposideros_armiger.JXIK01000431.1                      1548073 0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28302 0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         14707 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707 0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 25317 0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185114214 0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              56878 0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027 0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879 0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306 0 +    112731 C
e Eulemur_collaris.k141_601111                               40347 0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Equus_przewalskii.KK951119.1                              410037 0 -    498745 C
e Equus_caballus.CM000403.2                               21373251 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3039317 0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12576234 0 +  14770903 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               4168 0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  137121 0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662336 0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1798 0 +     87169 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           635 0 -      8242 C
e Condylura_cristata.JH655891.1                           35805159 0 +  53390261 C
e Colobus_polykomos.k141_906115                                 73 0 -     84244 C
e Colobus_guereza.LG01                                      376524 0 - 200372422 C
e Colobus_angolensis.KN981557.1                             406648 0 -   2368649 C
e Cheracebus_torquatus.k141_890198                           17346 0 +     39636 C
e Cheracebus_regulus.k141_471822                             17553 0 +    216457 C
e Cheracebus_lugens.k141_1179667                             17298 0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             6885 0 -     32913 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16877 0 +     27315 C
e Cebus_unicolor.k141_1654760                                64972 0 -     89041 C
e Cebus_olivaceus.k141_1404781                                5877 0 -     34880 C
e Cebus_albifrons.Contig27                                  368988 0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               40780 0 +     53515 C
e Cebuella_niveiventris.k141_592277                           2894 0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Callithrix_kuhlii.k119_404482                              17608 0 -     18408 C
e Callithrix_jacchus.pat_scaffold_3                      165451315 0 + 189096842 C
e Callithrix_geoffroyi.k119_473390                           16360 0 +     17162 C
e Callimico_goeldii.k141_1609886                              7662 0 -     13885 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Aotus_vociferans.k141_944972                                7147 0 +      8415 C
e Aotus_trivirgatus.k141_192090                              22011 0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                670369 0 +   5030052 C
e Aotus_griseimembra.k141_982342                             42356 0 +     43593 C
e Aotus_azarae.k141_118258                                   48609 0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174580 0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allenopithecus_nigroviridis.k141_3755588                   45388 0 +     53615 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810522 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       2979 16 +     36723 A-GCC---A--T-----C----A-CTG-TGC---T------T
s Acinonyx_jubatus.LLWD01001279.1                           810522 18 +   1699592 --cca---a--g-----c---ta-cca-ttc---t----ttg
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45388  2 +     53615 ----------------------------------t------t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413259  8 +  29979442 --cct---a--g-----c---ta-------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15899  7 -     61208 G-ACC---A--A-----C------------------------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 6
s Allochrocebus_lhoesti.k141_441277                          41314 16 +     44087 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13954 16 -     21945 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15630 16 +     32033 A-GCC---A--C-----C----G-CTG-TGC---T------T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70083 14 -     84148 A-TCC---T--T-----C----A-TTG-TTC-----------
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42316 14 -     78289 A-TCC---T--T-----C----A-TTG-TTC-----------
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41762 14 +     55831 A-TCC---T--T-----C----A-TTG-TTC-----------
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40204 14 -     64179 A-TCC---T--T-----C----A-TTG-TTC-----------
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21850 14 -     24835 A-TCC---T--T-----C----A-TTG-TTC-----------
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38833 14 +     45454 A-TCC---T--T-----C----A-TTG-TTC-----------
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44531 14 +     70886 A-TCC---T--T-----C----A-TTG-TTC-----------
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6656 14 +     30854 A-TCC---T--T-----C----A-TTG-TTT-----------
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30795 14 +     42133 A-TCC---T--T-----C----A-TTG-TTC-----------
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174580 16 -    412891 --cat---a--g-----c---ta-cca-ttc---t------t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Aotus_azarae.k141_118258                                   48609  8 -     65372 -----------------C----A-TTG-CTC-----------
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42356  8 +     43593 -----------------C----A-TTG-CTC-----------
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670369  8 +   5030052 -----------------c----a-ttg-ctt-----------
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22011  8 -     23494 -----------------C----A-TTG-CTC-----------
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7147  8 +      8415 -----------------C----A-TTG-CTC-----------
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13931 14 -     32367 g-cct---c--c-----c--c-c-cta-tt------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2865 16 -     15198 --cat---a--g-----c---ta-cca-ttc---t------t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 1
s Ateles_geoffroyi_b.tarseq_1536                               272594 14 +  21539123 A-TCC---T--T-----C----A-TTG-TTC-----------
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8761 14 +     48076 A-TCC---T--T-----C----A-TTG-TTC-----------
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3898 14 -     28759 A-TCC---T--T-----C----A-TTG-TTC-----------
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31451 14 +     44353 A-TCC---T--T-----C----A-TTG-TTC-----------
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46822 14 -     71267 A-TCC---T--T-----C----A-TTG-TTC-----------
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20881 14 -     33135 A-TCC---T--T-----C----A-TTG-TTC-----------
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4069 17 +     11645 a-acc---a--t-----c--c-a-ccg-ttc---t------t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4070 17 -     19611 a-acc---a--t-----c---ta-ccg-ttc---t------t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5791  9 +     28062 ----------------------A-TTG-TTC---T------C
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41085  9 -     91139 ----------------------A-TTG-TTC---T------C
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18611  9 +     95584 ----------------------A-TCG-TTT---T------C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18524  9 +    119600 ----------------------A-TTG-TTC---T------C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             7999  8 +     18648 -----------------C----A-CTG-CTC-----------
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7662  8 -     13885 -----------------C----A-CTG-CTC-----------
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16360  8 +     17162 -----------------C----A-CTG-CTC-----------
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451315  8 + 189096842 -----------------C----A-CTG-CTC-----------
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17608  8 -     18408 -----------------C----A-CTG-CTC-----------
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503309  8 +  60362399 --cct---a--g-----c---ta-------------------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6945  8 -     23171 --cct---a--g-----c---ta-------------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220288  8 +   9314153 --CTT---A--G-----C---TA-------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613423  8 +  59632846 --cct---a--g-----c---ta-------------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105004  8 -  63665305 --cct---a--g-----c---ta-------------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268131 17 +    496798 A-ATA---A--T-----c--c-a-cca-ctt---t------t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2936 16 +      5315 --cat---a--g-----c---ta-cca-ttc---t------t
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 1
s Cavia_aperea.AVPZ01000300.1                              4993853 18 +  23392119 tcacc---a--t-----c---gg-cca-ttc---t------t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997295 18 +  23407841 tcacc---a--t-----c---gg-cca-ttc---t------t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60396 18 -     66877 TCACC---A--T-----C---GG-CCA-TTC---T------T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2894  8 -     12580 -----------------C----A-CTG-CTC-----------
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40780  8 +     53515 -----------------C----A-CTG-CTC-----------
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368988  8 -  26074798 -----------------C----A-TTG-CTC-----------
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5877  8 -     34880 -----------------C----A-TTG-CTC-----------
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64972  8 -     89041 -----------------C----A-TTG-CTC-----------
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1303 17 -      1636 A-ATA---A--T-----CC---A-CCA-CTT---T------T
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490044 16 -  27778364 --tct---a--g-----t---ta-cca-ttc---c------t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16877 16 +     27315 --tct---a--g-----t---ta-cca-ttc---c------t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138553 16 -   4669795 A-GCC---A--C-----C----A-ctg-tgc---t------t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42293 16 +     47900 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42126 16 -     44860 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42109 16 -    148725 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25207 16 -     40656 A-GCC---A--C-----C----A-CTG-TGT---T------T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5176 16 +     20796 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9366 16 -     17524 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25088 16 -     34525 A-GCC---A--C-----C----A-CTG-TGT---T------T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9797 16 -     25376 A-GCC---A--C-----C----A-CTG-TGT---T------T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362396 16 -  39242232 A-GCC---A--C-----C----A-CTG-TGT---T------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268104 16 +  21565898 A-GCC---A--C-----C----A-CTG-TGT---T------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29565 16 -     45857 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25385 16 -     32606 A-GCC---A--C-----C----A-CTG-TGT---T------T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1538 16 +      8499 A-GCC---A--C-----C----A-CTG-TGT---T------T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23057 16 +     70610 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19982 16 +     36323 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10690 21 -     19938 --cccttta--g-----c--c-ataca-ttc---t-----tc
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28503 17 -     33796 A-ACC---A--C-----CC---G-CCA-TTC---T------T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3033 17 -     15404 a-acg---c--c-----c--c-a-cca-ttc---t------t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6885  1 -     32913 -----------------------------------------T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17298  1 -     40346 -----------------------------------------T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17553  1 +    216457 -----------------------------------------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17346  1 +     39636 -----------------------------------------T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1729  9 +      5346 ----------------------A-CTG-CCC---C------T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40431  9 -    112038 ----------------------A-CTG-TTC---T------C
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6003  9 +     34062 ----------------------A-CTG-TTC---T------C
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340879 16 +  18827391 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7424 16 -     44032 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302204 16 - 135778131 A-GCC---A--C-----C----A-ctg-tgc---t------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406648  7 -   2368649 -------------------------tg-tgc---t------t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376524  7 - 200372422 -------------------------tg-tgc---t------t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                 73  7 -     84244 -------------------------tg-tgc---t------t
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805159 20 +  53390261 --CTT---A--G-----c---ta-cta-ttc---t--ttatt
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           635 18 -      8242 --cct---a--a-----c---ta--ca-tttccac------c
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40194 18 -     83289 A-ACC---T--C-----T---GA-TATATTG---C------T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112377 16 - 224834208 A-ACC---T--T-----T---GA-CAT-TAC---C-------
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1798 18 +     87169 --cct---a--g-----c---ta-cca-ttc---t----ttg
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642734 17 -   1526836 A-ACC---A--T-----C---TA-CCA-TTC---C------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2836 18 +     50838 TTACC---A--T-----T---TT-TGG-TTC---T------T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1479 18 +     36344 TCACC---A--T-----C---TG-CCA-TTC---T------T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108022 24 -   2246927 --cccttta--g-----c--c-ataca-ttc---t--tcttc
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290450 17 +  12879189 a-gcc---t--c-----c--c-g-ctg-ttc---t------t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862602 16 -  20541912 --tgg---a--g-----c---ta-cca-ttc---c------t
i Desmodus_rotundus.KZ672289.1                           C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662336 16 -   1390856 --tct---a--g-----t---ta-cca-ttc---c------t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137121 16 -    198055 --tct---a--g-----t---ta-cca-ttc---c------t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96209 18 -    115145 TCACC---A--T-----CC---A-CCT-TTC---T------C
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948254 14 -  37912305 ----c---g--t-----t---tc-cca-ttt---c------t
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3201 14 -     10735 ----c---g--t-----t---ta-CCA-TTT---C------T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7799 18 +     14636 TCACC---A--T-----C---TA-CCA-TTC---T------T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4168 16 +     19438 --cct---g--c-----c---ta-cca-ttc---t------t
i Eidolon_helvum.AWHC01266696.1                          C 0 I 1
s Elephantulus_edwardii.JH947257.1                         9105366 16 -  10337057 --TTT---G--T-----C---TA-CCA-TTC---T------C
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28403 16 +    110024 A-AAC---T--T-----T---GG-CAT-TTC---C-------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01026522.1                           10367 16 +     18970 A-AAC---T--T-----T---GA-CAT-TTC---C-------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               24913840  8 +  41312741 --cct---a--g-----c---ta-------------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576234 13 +  14770903 --ccc---a--g-----c---ta-cca-tt------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              3039317 16 -   4378816 --cct---a--c-----c---ta-tcc-ttc---t------t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373251 16 +  39960074 --cct---a--c-----c---ta-tcc-ttc---t------t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410037 16 -    498745 --cct---a--c-----c---ta-tcc-ttc---t------t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260402 16 +  21539334 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186244428 18 - 206538554 --cca---a--g-----c---ta-cca-ttc---t----ttg
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114214 18 - 205367284 --CCA---A--G-----C---TA-cca-ttc---t----ttg
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25317 18 -     30238 --cca---a--g-----c---ta-cca-ttc---t----ttg
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122206  5 -    137831 ----------------------------Ttc---t------t
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5746  5 +     22493 ----------------------------Ttc---t------t
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17788  5 -     32986 ----------------------------ttc---t------t
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16940 17 +     18121 a-gcc---a--t-----c---ta-cca-ttc---t------t
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               3316 16 -      8343 A-GCC---A--T-----C----A-CTG-TGC---T------T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252327 16 - 186649187 a-gcc---a--t-----c----a-ctg-tgc---t------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28302 18 -    327341 --cct---a--g-----c---ta-cca-ttc---t----ttg
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1924908 18 -  22651954 AAACC---A--T-----C--c-a-cca-ttc---t------t
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548073 16 -   1711038 --tct---a--g-----t---ta-cat-ttt---t------t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47389 16 +     49977 --cct---a--g-----t---ta-ctt-ttt---t------t
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140320 16 -    630532 A-GCC---A--T-----C----A-CTG-TGC---T------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66785 20 +     83186 --CCT---A--G-----C---TA-CCA-TTT-TTT---TT-G
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69278  6 +    143317 --------------------------G-TTC---T------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 5 C 0
s Hylobates_agilis.k141_1155965                               3355 16 +     12352 A-GCC---A--T-----C----A-CTG-TGC---T------T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10538 16 +     55766 A-GCC---A--T-----C----A-CTG-TGC---T------T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050134 16 + 191637585 A-GCC---A--T-----C----A-CTG-TGC---T------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799012 16 +  11177569 A-GCC---A--T-----C----A-CTG-TGC---T------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384662 17 +   7955117 A-TTC---A--T-----CCacca-gta-tt------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_2415743                                     189 17 +     11955 A-ACC---A--T-----CC---A-CCA-TTC---T------T
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237084  7 +   9596543 G-ACC---A--C-----A------------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 6
s Lagothrix_lagothricha.k141_246028                          41137 14 +    110728 A-TCC---T--T-----C----A-CTG-TTC-----------
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59713 13 -     65777 --cct---a--g-----c---ta-cca-tt------------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 1
s Leontocebus_fuscicollis.k141_2994775                        1815  8 -     13097 -----------------C----A-CTG-CTC-----------
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1766  8 +      5940 -----------------C----A-CTG-CTC-----------
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1397  8 -      5717 -----------------C----A-CTG-CTC-----------
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8009  8 -     11567 -----------------C----G-CTG-CTC-----------
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9390  8 -     12945 -----------------C----G-CTG-CTC-----------
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6859 17 +     29618 A-ACC---A--T-----CC---A-CCA-TTC---T------T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6856 17 +     31569 A-ACC---A--T-----CC---A-CCA-TTC---T------T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6866 17 +     24756 a-acc---a--t-----c--c-a-cca-ttc---t------t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6860 17 +     16388 A-ACC---A--T-----CC---A-CCA-TTC---T------T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811189  8 -   3914936 --cct---a--g-----c---ta-------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               330506 16 -   1826925 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7985  5 +     19643 ----------------------------TTT---T------T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041645  5 -   6120653 ----------------------------TTT---T------T
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612578  8 +  59628241 --cct---a--g-----c---tt-------------------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42823 16 -     61512 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370484 16 -  60120075 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22739 16 +     30207 T-GCC---A--C-----C----A-CTG-TGC---T------T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19842 16 -     24934 T-GCC---A--C-----C----A-CTG-TGC---T------T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22691 16 +     30527 T-GCC---A--C-----C----A-CTG-TGC---T------T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33881 16 -     50087 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43652 16 +     51645 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412820 16 - 187317192 T-GCC---A--C-----C----A-Ctg-tgc---t------t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397043 16 +  25927173 A-GCC---A--C-----C----A-ctg-tgc---t------t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46207 16 -     62418 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22862 16 +     24253 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42683 16 +     59329 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268616 16 +    668171 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19797 16 +     21031 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  394 16 +     17132 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221134 14 -    270270 --cct---g--c-----c---ta-tca-ttt-----------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 2
s Mandrillus_leucophaeus.scaffold280                        319894 16 +  24302211 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354726 16 -    752769 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671416 16 -    737560 --cct---a--g-----c---ta-cct-ttc---t------g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218709 16 +    317179 --cct---a--g-----c---ta-cct-ttc---t------g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498870 17 +  40650429 A-TTC---A--T-----ccacca-gta-tt------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                       148336 21 +    207569 --cgt---a--gctaacc---tt-tct-ttt---t------t
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23709  8 -     74585 --cct---a--g-----c---ta-------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46529 13 -    140813 A-ACC---T--T-----T---AA-CAT-T-------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 1
s Mesocricetus_auratus.KB708134.1                         17426902 16 +  29670104 A-AGC---T--T-----T---GA-CAT-TAc---c-------
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mico_argentatus.k141_582562                                 7771  8 +     17804 -----------------C----A-CTG-CTC-----------
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8555  8 -     12984 -----------------C----A-CTG-CTC-----------
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16506  8 -     26561 -----------------C----A-CTG-CTC-----------
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982472 16 +  93316391 A--CC---A--C-----CC---a-cca-ttc---t------t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182550 16 +    200668 --tat---a--g-----c---ta-cca-ttc---t------t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 1
s Miopithecus_ogouensis.k141_1534655                         19921 16 -     27822 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6199  8 +     27589 --cct---g--g-----c---ta-------------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50267 16 -     62432 a--cc---a--c-----c--c-a-cca-ttc---t------t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176729 16 +    366855 --CAT---A--G-----C---TA-CCA-TTC---T------T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_18455                   16057 18 -     63510 --cct---a--g-----c---ta-cca-ttc---t----ttg
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36583 13 +     47283 --cct---a--g-----c---ta-cca-tt------------
i Murina_feae.MurFea_scaffold_17764                      C 0 I 1
s Mus_caroli.FMAL02030609.1                                    295 13 +      5579 A-ACT---T--T-----T---GA-CAT-T-------------
i Mus_caroli.FMAL02030609.1                              C 0 I 1
s Mus_musculus.chr8                                       41682249 13 + 129401213 A-ACT---T--T-----T---GC-CAT-T-------------
i Mus_musculus.chr8                                      C 0 I 2
s Mus_spretus.CM004101.1                                  39489862 13 + 130317789 A-ACC---T--T-----T---GA-CAT-T-------------
i Mus_spretus.CM004101.1                                 C 0 I 1
s Mustela_putorius.JH418006.1                             14352653  8 +  14710649 --cct---a--g-----c---ta-------------------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790599 13 +  10118263 --nnn---n--n-----n---nn-nnn-nn------------
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                4384985 13 +   6019432 --cct---a--g-----t---ta-cca-tt------------
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                               380817  1 +   4330536 -----------------------------c------------
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_185951                        3364 13 +      3929 --CCT---A--G-----T---TA-CCA-TT------------
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117458 21 +    130748 --cccttta--g-----c--c-atgta-ttc---t-----tc
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466586  8 -  31847680 --cct---a--g-----c---ta-------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125530 16 -    149072 --CAT---A--G-----C---TC-CTG-TTC---T------T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51244 16 -    132029 A-GCC---A--T-----C----A-CTG-TGC---T------T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7339 16 -     16345 A-GCC---A--T-----C----A-CTG-TGC---T------T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13224 16 +     22201 A-GCC---A--T-----C----A-CTG-TGC---T------T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411508 16 -  22158432 A-GCC---A--T-----C----A-CTG-TGC---T------T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23622 16 -     54323 A-GCC---A--T-----C----A-CTG-TGC---T------T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93633953  5 + 196305487 ----------------------------CTT---T------T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              711  5 -      3937 ----------------------------CTT---T------T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562203  5 - 199412804 ----------------------------CTT---T------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196178  8 +   9404916 --ccc---a--g-----c---ta-------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11045184 18 -  11899542 TTATC---A--T-----C---TA-Tgg-ctc---t------t
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449394 10 +   2017862 --cct---tgtg-----c---ta-------------------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90131 16 -    140218 A-ACC---T--T-----T---GG-TAT-TTT---C-------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_2487                   104971 17 +    107918 A-ACC---T--G-----T---GA-CAT-TTC---C------T
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11257 16 -     14239 --gct---a--c-----c-a--a-cca-ttc---t------c
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37327  5 -     51505 ----------------------------ttc---t------t
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350341  5 +   1103335 ----------------------------ttc---t------t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37218  8 +    559221 --cct---a--g-----c---ta-------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_troglodytes.CM009242.2                               1470332 16 - 189151597 A-GCC---A--T-----C----A-CTG-TGC---T------T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22138 18 -    230217 --cca---a--g-----c---ta-cca-ttc---t----ttg
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459464 18 -  18783137 --cca---a--g-----c---ta-cca-ttc---t----ttg
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970184 18 +   8748460 --cca---a--g-----c---ta-cca-ttc---t----ttg
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240734 16 - 183742232 A-GCC---A--C-----C----A-Ctg-tgc---t------t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7198 16 +     21308 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288237 16 -  20919399 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19853 16 -     27687 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    12989 16 +     16796 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19799 16 -     23640 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12783 18 +     78924 --cct---a--g-----c---ta-cca-ttc---t----ttg
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23634  5 +     31479 ----------------------------TTC---T------T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            15994  5 -     24908 ----------------------------TTC---T------T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37455 14 +     38305 ----T---T--T-----T---TA-CCA-TTC---C------A
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244616 17 +  18517816 A-ACC---T--T-----T---GA-AAT-ttc---c------t
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29862 18 -     56120 TATAC---A--G-----TC---A-CCA-TTT---T------T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6653 16 +      7560 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62361 16 -     63152 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44960 16 +     45295 A-GCC---A--C-----C----A-CTG-TGC---T------T
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2638 16 +      5735 A-GCC---A--C-----C----A-ctg-tgc---t------t
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              759 13 +     22231 --cct---a--g-----c---ta-cta-tt------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 1
s Pithecia_albicans.k141_1239476                             62781  9 +    207309 ----------------------A-TTG-TTC---T------C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3877  9 -     25401 ----------------------A-TTG-TTC---T------C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29616  9 +     58159 ----------------------A-TTG-TTC---T------C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29892  9 +     63561 ----------------------A-TTG-TTC---T------C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29655  9 +     51148 ----------------------A-TTG-TTC---T------C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554624  9 -   4542175 ----------------------A-TTG-TTC---T------C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29639  9 +     51125 ----------------------A-TTG-TTC---T------C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6055  1 +     39866 -----------------------------------------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1140  1 -      9282 -----------------------------------------T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40544  1 -     87950 -----------------------------------------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40937  1 -     88961 -----------------------------------------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5636  1 -     39403 -----------------------------------------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40590  1 +     87928 -----------------------------------------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5633  1 -     60166 -----------------------------------------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12569  1 -     67232 -----------------------------------------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40485  1 -     90634 -----------------------------------------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41953  1 +     89403 -----------------------------------------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175472 16 - 189387572 A-GCC---A--T-----C----A-CTG-TGC---T------T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190290 16 -   9816681 A-GCC---A--T-----C----A-CTG-TGC---T------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563948 17 -   2598838 A-ACC---A--T-----CC---a-cca-ttc---t------t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1584 17 -      7103 a-acc---a--t-----c--c-a-cca-ttc---t------t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2181 17 -     11706 a-acc---a--t-----c--c-a-cca-ttc---t------t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5917 17 -     30655 a-acc---a--t-----c--c-a-cca-ttc---t------t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32242 17 +     46564 a-acc---a--t-----c--c-a-cca-ttc---t------t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92513 17 -     98465 a-acc---a--t-----c--c-a-cca-ttc---t------t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6150 17 +     35169 a-acc---a--t-----c--c-a-cca-ttc---t------t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34065 13 +     52041 a-acc---t--t-----t-a--a-cat-t-------------
i Psammomys_obesus.NESX01036366.1                        C 0 I 1
s Pteronotus_parnellii.KE847780.1                            49795 16 -     66298 --cat---a--g-----t---ta-cca-ttc---t------t
i Pteronotus_parnellii.KE847780.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2430  8 -     18639 --cct---a--g-----c---ta-------------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838762 16 -  28871421 --cct---g--c-----c---ta-cca-ttc---t------t
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN525825.1                             3535328 16 -   4952924 --cct---g--c-----c---ta-cta-ttc---t------t
i Pteropus_vampyrus.KN525825.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            18096785 18 +  38429054 --cca---a--g-----c---ta-cca-ttc---t----ttg
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Rattus_norvegicus.chr16                                 37020343 13 -  90668790 A-ACC---T--T-----T---GA-CAT-T-------------
i Rattus_norvegicus.chr16                                C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                       2911417 16 +   3329780 --cct---a--g-----c---ta-cct-ttt---t------t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 2
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72745 16 -    116970 --cct---g--c-----c---ta-cca-ttc---t------t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 1
s Saguinus_bicolor.k141_1429097                               1726  8 +     27962 -----------------C----A-CTG-CCC-----------
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1734  8 +      6077 -----------------C----A-CTG-CCC-----------
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1753  8 +      5971 -----------------C----A-CTT-CTC-----------
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1807  8 +      5932 -----------------C----A-CTT-CTC-----------
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_1571581                              1952  7 -      2099 -----------------C----A-CTT-CT------------
i Saguinus_labiatus.k141_1571581                         C 0 N 0
s Saguinus_midas.LG03                                       389074  8 - 209938924 -----------------C----A-CTG-CCC-----------
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1755  8 +      5979 -----------------C----A-CTT-CTC-----------
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2121  8 -      4301 -----------------C----A-CTG-CCC-----------
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236208  8 +   5703754 -----------------C----A-TTG-CTC-----------
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5798  8 +     21866 -----------------C----A-TTG-CTC-----------
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113956 20 +    313613 --cct---a--g-----c---ta-ctg-ttc---t--ttact
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46170 22 +     77746 A-ATC---T--T-----T---GA-CAT-TTC---C-CATTGT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 250
s Solenodon_paradoxus.SolPar_flattened_line_126            1856263 16 -   1910179 --gct---a--g-----c---ta-cca-ttc---t------t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866231 17 +   3870691 A-TTC---A--T-----CCacca-gta-tt------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525              4428  8 -     97271 --cct---a--g-----c---ta-------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122468 18 +    196729 --cct---a--g-----c---ta-cca-ttc---t----ttg
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388480 16 +   1523678 A-GCC---A--T-----C----A-CTG-TGC---T------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11571 16 +     22964 --cct---a--g-----c---ta-ctg-ttt---t------t
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_224794                 576 21 +      5583 --cccttta--g-----a--c-atata-ttt---t-----tc
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189297 15 +    199430 --cct---a--g-----c---ta-cca-tt----t------g
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103253 15 -    539355 --CCT---A--G-----C---TA-CCA-AT----T------T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4823 17 +      6850 A-AGA---A--T-----CC---A-CCA-CTT---T------T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4862 17 +     20590 A-AGA---A--T-----CC---A-CCA-CTT---T------T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350720 16 - 186847797 A-GCC---A--C-----C----A-ctg-tgc---t------t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22190 18 -     33621 TATAC---A--T-----CC---A-CCA-TTG---T------T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17698 24 -     31044 --cccttta--g-----c--c-ataca-ttc---t--tcttc
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477612 16 -    610378 --cat---a--g-----c---ta-cca-ttc---t------t
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Tupaia_chinensis.KB320699.1                              1831824 13 -   4065304 A-ACC---A--A-----CC---A-TGA-T-------------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6065 13 -     70247 a-acc---a--a-----c--c-a-cta-t-------------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105180 20 -    105689 --cct---t--G-----A---TA-ATA-TTT---TTCAT--T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179779  8 +   5085361 --cct---a--g-----c---ta-------------------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23126 12 -     30710 A-ACc---a--t-----c--c-a-cca---------------
i Varecia_rubra.k141_787544                              I 124 I 2
s Varecia_variegata.k141_289850                              22033 12 -    147434 A-ACc---a--t-----c--c-a-cca---------------
i Varecia_variegata.k141_289850                          I 124 I 2
s Vulpes_lagopus.VulLag_flattened_line_12041                102942  8 -    112863 --cct---a--g-----c---ta-------------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172003 17 -    224448 a-tct---a--t-----ccacca-cta-tt------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732         26594  8 -     86975 --cct---c--g-----c---ta-------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1257  7 +      2695 A-ACT---A--C-----C------------------------
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 6
e Microgale_talazaci.MicTal_scaffold_6613                    42585 403 +    145209 I
e Echinops_telfairi.JH980293.1                            62851496 405 - 111700974 I
e Pygathrix_nigripes_a.k141_215492                              5414  0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  151037  0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             24544  0 +     91421 C
e Arctocebus_calabarensis.k141_1364444                       18203  0 -     45910 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Trachypithecus_pileatus.k141_2862967                       58782  0 +     59866 C
e Trachypithecus_phayrei.ctg124                             253023  9 -   6242583 I
e Trachypithecus_obscurus.k141_848057                         7784  9 -     13050 I
e Trachypithecus_melamera.k141_591572                          818  0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     7390  0 +     22490 C
e Trachypithecus_laotum.k141_928651                          25947  0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      27910  0 -     64340 C
e Trachypithecus_germaini.k141_57262                          6896  0 -     28527 C
e Trachypithecus_geei.k141_1001272                           26088  0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      25971  0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       17746  0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     31081  9 -     78344 I
e Trachypithecus_auratus.k141_1189070                        18425  0 +     26378 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Semnopithecus_vetulus.k141_244474                          26283  0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     23214  0 -     29113 C
e Semnopithecus_priam.k141_714795                            20534  0 -     42441 C
e Semnopithecus_johnii.k141_843753                           12876  0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      26380  0 +     58920 C
e Semnopithecus_entellus.k141_158471                         22861  0 +     27374 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rhinopithecus_strykeri.ctg102                             233962  0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104119721  0 + 195417433 C
e Rhinopithecus_bieti.k119_221883                            26354  0 +     27361 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Presbytis_mitrata.k141_584736                              42329  0 -     80239 C
e Presbytis_comata.k141_1230337                              25134  0 +     69807 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              26520  0 +     34575 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Loxodonta_africana.GL010049.1                           39078096  0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       2995  5 +     36723 T--T------------------------C-----T-T
s Acinonyx_jubatus.LLWD01001279.1                           810540  5 +   1699592 ct-t------------------------t-----t--
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15912  5 -     61208 T--T------------------------A-----C-T
i Allactaga_bullata.AllBul_scaffold_20030                I 6 I 19
s Allenopithecus_nigroviridis.k141_3755588                   45390  5 +     53615 t--t------------------------c-----t-t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41330  5 +     44087 T--T------------------------C-----T-T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13970  5 -     21945 T--T------------------------C-----T-T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15646  5 +     32033 T--T------------------------C-----T-T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70097  4 -     84148 ---T------------------------T-----T-T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42330  4 -     78289 ---T------------------------T-----T-T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41776  4 +     55831 ---T------------------------T-----T-T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40218  4 -     64179 ---T------------------------T-----T-T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21864  4 -     24835 ---T------------------------T-----T-T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38847  4 +     45454 ---T------------------------T-----T-T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44545  4 +     70886 ---T------------------------T-----T-T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6670  4 +     30854 ---T------------------------T-----T-T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30809  4 +     42133 ---T------------------------T-----T-T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174597  4 -    412891 t--t------------------------t-----t--
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Aotus_azarae.k141_118258                                   48617  7 -     65372 ---T---------------------TTTC-----T-T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42364  7 +     43593 ---T---------------------TTTC-----T-T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670377  7 +   5030052 ---t---------------------tttc-----t-t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22019  7 -     23494 ---T---------------------TTTC-----T-T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7155  7 +      8415 ---T---------------------TTTC-----T-T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13945  2 -     32367 ----------------------------------t-t
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 2
s Arctocebus_calabarensis.k141_1364444                       18203  2 -     45910 ----------------------------------T-T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2882  5 -     15198 t--t------------------------t----tg--
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 1 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272608  4 +  21539123 ---T------------------------T-----T-T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8775  4 +     48076 ---T------------------------T-----T-T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3912  4 -     28759 ---T------------------------T-----T-T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31465  4 +     44353 ---T------------------------T-----T-T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46836  4 -     71267 ---T------------------------T-----T-T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20895  4 -     33135 ---T------------------------T-----T-T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4086  5 +     11645 t--c------------------------c-----t-t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4087 10 -     19611 t--c-------------------cttccc-----t-t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5800  5 +     28062 C--T------------------------C-----T-T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41094  5 -     91139 C--T------------------------C-----T-T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18620  5 +     95584 C--T------------------------C-----T-T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18533  5 +    119600 C--T------------------------C-----T-T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8007  7 +     18648 ---C---------------------TGTC-----T-T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7670  7 -     13885 ---C---------------------TGTC-----T-T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16368  7 +     17162 ---C---------------------TGTC-----T-T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451323  7 + 189096842 ---C---------------------TGTC-----T-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17616  7 -     18408 ---C---------------------TGTC-----T-T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268148  5 +    496798 t--t------------------------t-----t-c
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2953  4 +      5315 t--t------------------------t-----c--
i Carollia_perspicillata.CarPer_scaffold_170178          I 1 C 0
s Cavia_aperea.AVPZ01000300.1                              4993871  5 +  23392119 t--a------------------------t-----t-t
i Cavia_aperea.AVPZ01000300.1                            C 0 I 2
s Cavia_porcellus.DS562891.1                               4997313  5 +  23407841 t--a------------------------t-----t-t
i Cavia_porcellus.DS562891.1                             C 0 I 2
s Cavia_tschudii.CavTsc_scaffold_23560                       60414  5 -     66877 T--A------------------------T-----T-T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 2
s Cebuella_niveiventris.k141_592277                           2902  7 -     12580 ---C---------------------TGTC-----T-T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40788  7 +     53515 ---C---------------------TGTC-----T-T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  368996  7 -  26074798 ---T---------------------TTTC-----T-T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5885  7 -     34880 ---T---------------------TTTC-----T-T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64980  7 -     89041 ---T---------------------TTTC-----T-T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1320  5 -      1636 T--T------------------------T-----T-C
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490060  5 -  27778364 tt-t------------------------t-----t--
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16893  5 +     27315 tt-t------------------------t-----t--
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138569  5 -   4669795 t--t------------------------c-----t-t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42309  5 +     47900 T--T------------------------C-----T-T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42142  5 -     44860 T--T------------------------C-----T-T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42125  5 -    148725 T--T------------------------C-----T-T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25223  5 -     40656 T--T------------------------C-----T-T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5192  5 +     20796 T--T------------------------C-----T-T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9382  5 -     17524 T--T------------------------C-----T-T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25104  5 -     34525 T--T------------------------C-----T-T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9813  5 -     25376 T--T------------------------C-----T-T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362412  5 -  39242232 T--T------------------------C-----T-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268120  5 +  21565898 T--T------------------------C-----T-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29581  5 -     45857 T--T------------------------C-----T-T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25401  5 -     32606 T--T------------------------C-----T-T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1554  5 +      8499 T--T------------------------C-----T-T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23073  5 +     70610 T--T------------------------C-----T-T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         19998  5 +     36323 T--T------------------------C-----T-T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10711  4 -     19938 t--t------------------------t-----t--
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28520  5 -     33796 T--T------------------------C-----T-T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3050  5 -     15404 t--t------------------------c-----t-t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6886  5 -     32913 C--T------------------------C-----T-T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17299  5 -     40346 C--T------------------------C-----T-T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17554  5 +    216457 C--T------------------------C-----T-T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17347  5 +     39636 C--T------------------------C-----T-T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1738  5 +      5346 G--T------------------------C-----T-G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40440  5 -    112038 C--T------------------------C-----T-T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6012  5 +     34062 C--T------------------------C-----T-T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340895  5 +  18827391 T--T------------------------C-----T-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7440  5 -     44032 T--T------------------------C-----T-T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302220  5 - 135778131 t--t------------------------c-----t-t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406655  5 -   2368649 t--t------------------------c-----t-t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376531  5 - 200372422 t--t------------------------c-----t-t
i Colobus_guereza.LG01                                   C 0 T 713
s Colobus_polykomos.k141_906115                                 80  5 -     84244 t--t------------------------c-----t-t
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805179  4 +  53390261 t--t------------------------t-----t--
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           653  4 -      8242 c--c------------------------c-----t--
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40212  4 -     83289 T--T------------------------T-----A--
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 1
s Cricetulus_griseus.LT883664.1                          213112394  4 - 224834208 T--T------------------------T-----A--
i Cricetulus_griseus.LT883664.1                          I 1 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1816  5 +     87169 ct-t------------------------t-----t--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642751  5 -   1526836 T--T------------------------T-----T-G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 2
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2854  5 +     50838 T--A------------------------T-----T-T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 2
s Cuniculus_paca.CunPac_flattened_line_7025                   1497  5 +     36344 T--A------------------------T-----T-T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 2
s Dasypus_novemcinctus.JH564415.1                          2108046  4 -   2246927 t--t------------------------t-----t--
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290467  5 +  12879189 c--c------------------------c-----t-t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862619  4 -  20541912 t--t------------------------t-----c--
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662352  5 -   1390856 tt-t------------------------t-----t--
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137137  5 -    198055 tt-t------------------------t-----t--
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96227  5 -    115145 T--A------------------------T-----T-T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 2
s Dipodomys_ordii.KN672350.1                              18948268  4 -  37912305 t--t------------------------t-----t--
i Dipodomys_ordii.KN672350.1                             C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_89095                   3215  4 -     10735 T--T------------------------T-----T--
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_80628                  7817  5 +     14636 T--A------------------------T-----T-G
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 2
s Eidolon_helvum.AWHC01266696.1                               4185  4 +     19438 t--t------------------------t-----t--
i Eidolon_helvum.AWHC01266696.1                          I 1 C 0
s Elephantulus_edwardii.JH947257.1                         9105382  4 -  10337057 A--C------------------------T-----T--
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28420  4 +    110024 T--T------------------------C-----A--
i Ellobius_lutescens.LOEQ01008920.1                      I 1 I 1
s Ellobius_talpinus.LOJH01026522.1                           10384  4 +     18970 T--T------------------------C-----A--
i Ellobius_talpinus.LOJH01026522.1                       I 1 I 1
s Eptesicus_fuscus.JH977646.1                             12576248  9 +  14770903 t--t------------------------tcccccc--
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              3039333  5 -   4378816 tt-t------------------------t-----t--
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373267  5 +  39960074 tt-t------------------------t-----t--
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410053  5 -    498745 tt-t------------------------t-----t--
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260418  5 +  21539334 T--T------------------------C-----T-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186244446  5 - 206538554 ct-t------------------------t-----t--
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114232  5 - 205367284 ct-t------------------------t-----t--
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25335  5 -     30238 ct-t------------------------t-----t--
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122211  5 -    137831 t--t------------------------c-----t-t
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5751  5 +     22493 t--t------------------------c-----t-t
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17793  5 -     32986 t--t------------------------c-----t-t
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               16957  5 +     18121 t--t------------------------t-----t-t
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 38
s Gorilla_beringei.k141_3358147                               3332  5 -      8343 T--T------------------------C-----T-T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252343  5 - 186649187 t--t------------------------c-----t-t
i Gorilla_gorilla.LT578341.1                             C 0 I 38
s Helogale_parvula.HelPar_flattened_line_2585                28320  5 -    327341 ct-t------------------------t-----t--
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1924926  5 -  22651954 t--a------------------------t-----t-t
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                      1548089  4 -   1711038 t--g------------------------t-----t--
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47405  4 +     49977 t--a------------------------t-----t--
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140336  5 -    630532 T--T------------------------C-----T-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66805  5 +     83186 C-TT------------------------T-----T--
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69284  5 +    143317 T--A------------------------T-----T-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 2
s Hylobates_agilis.k141_1155965                               3371  5 +     12352 T--T------------------------C-----T-T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10554  5 +     55766 T--T------------------------C-----T-T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050150  5 + 191637585 T--T------------------------C-----T-T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799028  5 +  11177569 T--T------------------------C-----T-C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384680  2 +   7955117 ----------------------------------t-t
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 I 2
s Indri_indri.k141_2415743                                     206  5 +     11955 T--T------------------------C-----T-T
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237097  5 +   9596543 T--T------------------------A-----C-T
i Jaculus_jaculus.JH725527.1                             I 6 I 19
s Lagothrix_lagothricha.k141_246028                          41151  4 +    110728 ---T------------------------T-----T-T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59727  6 -     65777 t--t------------------------ccc---c--
i Lasiurus_borealis.LasBor_scaffold_16567                I 1 C 0
s Leontocebus_fuscicollis.k141_2994775                        1823  7 -     13097 ---C---------------------TGTC-----T-G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1774  7 +      5940 ---C---------------------TGTC-----T-G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1405  7 -      5717 ---C---------------------TGTC-----T-G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8017  7 -     11567 ---C---------------------TGTC-----T-T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9398  7 -     12945 ---C---------------------TGTC-----T-T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6876  5 +     29618 T--T------------------------C-----T-T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6873  5 +     31569 T--T------------------------C-----T-T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6883  5 +     24756 t--t------------------------c-----t-t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6877  5 +     16388 T--T------------------------C-----T-T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               330522  5 -   1826925 T--T------------------------C-----T-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7990  5 +     19643 T--T------------------------C-----T-T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041650  5 -   6120653 T--T------------------------C-----T-T
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_1757516                              42839  5 -     61512 T--T------------------------C-----T-T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370500  5 -  60120075 T--T------------------------C-----T-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22755  5 +     30207 T--T------------------------C-----T-T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19858  5 -     24934 T--T------------------------C-----T-T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22707  5 +     30527 T--T------------------------C-----T-T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33897  5 -     50087 T--T------------------------C-----T-T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43668  5 +     51645 T--T------------------------C-----T-T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412836  5 - 187317192 t--t------------------------c-----t-t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397059  5 +  25927173 t--t------------------------c-----t-t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46223  5 -     62418 T--T------------------------C-----T-T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22878  5 +     24253 T--T------------------------C-----T-T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42699  5 +     59329 T--T------------------------C-----T-T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268632  5 +    668171 T--T------------------------C-----T-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19813  5 +     21031 T--T------------------------C-----T-T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  410  5 +     17132 T--T------------------------C-----T-T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221150  4 -    270270 t--t------------------------t-----t--
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 2 C 0
s Mandrillus_leucophaeus.scaffold280                        319910  5 +  24302211 T--T------------------------C-----T-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354742  5 -    752769 T--T------------------------C-----T-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671432  5 -    737560 tt-t------------------------t-----t--
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218725  5 +    317179 tt-t------------------------t-----t--
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498888  3 +  40650429 ----------------------------------ttt
i Marmota_marmota.CZRN01000018.1                         I 1 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                       148357  4 +    207569 c--t------------------------t-----t--
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46543  4 -    140813 T--T------------------------T-----A--
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 I 1
s Mesocricetus_auratus.KB708134.1                         17426919  4 +  29670104 t--t------------------------t-----a--
i Mesocricetus_auratus.KB708134.1                        I 1 I 1
s Mico_argentatus.k141_582562                                 7779  7 +     17804 ---C---------------------TGTC-----T-T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8563  7 -     12984 ---T---------------------TGTC-----T-T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16514  7 -     26561 ---C---------------------TGTC-----T-T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982488  5 +  93316391 t--t------------------------c-----t-t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182567  4 +    200668 t--t------------------------t-----t--
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         19937  5 -     27822 T--T------------------------C-----T-T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     50283  5 -     62432 t--t------------------------c-----t-t
i Mirza_zaza.k141_766280                                 C 0 I 16
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176746  8 +    366855 T--T--------------------TTTTT-----T--
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16075  5 -     63510 ct-t------------------------t-----t--
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36597  1 +     47283 t------------------------------------
i Murina_feae.MurFea_scaffold_17764                      I 1 I 3
s Mus_caroli.FMAL02030609.1                                    309  4 +      5579 C--T------------------------C-----A--
i Mus_caroli.FMAL02030609.1                              I 1 I 1
s Mus_musculus.chr8                                       41682264  4 + 129401213 T--T------------------------C-----A--
i Mus_musculus.chr8                                      I 2 I 1
s Mus_spretus.CM004101.1                                  39489876  4 + 130317789 T--T------------------------C-----A--
i Mus_spretus.CM004101.1                                 I 1 I 1
s Myotis_brandtii.KE162005.1                               9790613 30 +  10118263 n--nnnnnnnnnnnnnnnnnnnnnnnnnn---nnn--
i Myotis_brandtii.KE162005.1                             I 1 I 2
s Myotis_davidii.KB100139.1                                4384999  6 +   6019432 c--c------------------------ccc---a--
i Myotis_davidii.KB100139.1                              I 1 I 2
s Myotis_lucifugus.GL429869.1                               380819  6 +   4330536 c--c------------------------ccc---a--
i Myotis_lucifugus.GL429869.1                            I 1 I 2
s Myotis_myotis.MyoMyo_scaffold_185951                        3378  6 +      3929 C--C------------------------C---CCA--
i Myotis_myotis.MyoMyo_scaffold_185951                   I 1 I 38
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117479  4 +    130748 t--t------------------------t-----t--
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26520  3 +     34575 ----------------------------C-----T-T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125546  3 -    149072 ---T------------------------T-----T--
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51260  5 -    132029 T--T------------------------C-----T-T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7355  5 -     16345 T--T------------------------C-----T-T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13240  5 +     22201 T--T------------------------C-----T-T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411524  5 -  22158432 T--T------------------------C-----T-T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23638  5 -     54323 T--T------------------------C-----T-T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93633958  5 + 196305487 T--T------------------------C-----T-T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              716  5 -      3937 T--T------------------------C-----T-T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562208  5 - 199412804 T--T------------------------C-----T-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11045202  5 -  11899542 t--a------------------------t-----t-t
i Octodon_degus.JH651603.1                               C 0 I 2
s Ondatra_zibethicus.OndZib_scaffold_7387                    90148  4 -    140218 T--T------------------------T-----A--
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 I 1
s Onychomys_torridus.OnyTor_scaffold_2487                   104988  4 +    107918 C--T------------------------T-----A--
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_171931              11273  4 -     14239 t--t------------------------t-----t--
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37332  5 -     51505 t--t------------------------c-----t-t
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350346  5 +   1103335 t--t------------------------c-----t-t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470348  5 - 189151597 T--T------------------------C-----T-T
i Pan_troglodytes.CM009242.2                             C 0 I 44
s Panthera_onca.PanOnc_flattened_line_3271                   22156  5 -    230217 ct-t------------------------t-----t--
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459482  5 -  18783137 ct-t------------------------t-----t--
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970202  5 +   8748460 ct-t------------------------t-----t--
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240750  5 - 183742232 t--t------------------------c-----t-t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7214  5 +     21308 T--T------------------------C-----T-T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288253  5 -  20919399 T--T------------------------C-----T-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19869  5 -     27687 T--T------------------------C-----T-T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13005  5 +     16796 T--T------------------------C-----T-T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19815  5 -     23640 T--T------------------------C-----T-T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12801  5 +     78924 ct-t------------------------t-----t--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23639  5 +     31479 T--T------------------------C-----T-T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            15999  5 -     24908 T--T------------------------C-----T-T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37469  4 +     38305 G--T------------------------T-----T--
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 I 1
s Peromyscus_maniculatus.KI615324.1                         244633  4 +  18517816 t--t------------------------t-----a--
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1
s Petromus_typicus.PetTyp_scaffold_17301                     29880  5 -     56120 T--A------------------------C-----T-T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 2
s Piliocolobus_badius.k141_2495623                            6669  5 +      7560 T--T------------------------T-----T-T
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62377  5 -     63152 T--T------------------------T-----T-T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44976  5 +     45295 T--T------------------------T-----T-T
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2654  5 +      5735 t--t------------------------t-----t-t
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              773  5 +     22231 t--t------------------------tc----c--
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 1 C 0
s Pithecia_albicans.k141_1239476                             62790  2 +    207309 ----------------------------------T-T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3886  2 -     25401 ----------------------------------T-T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29625  2 +     58159 ----------------------------------T-T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29901  2 +     63561 ----------------------------------T-T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29664  2 +     51148 ----------------------------------T-T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554633  2 -   4542175 ----------------------------------T-T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29648  2 +     51125 ----------------------------------T-T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6056  5 +     39866 C--T------------------------C-----T-T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1141  5 -      9282 C--T------------------------C-----T-T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40545  5 -     87950 C--T------------------------C-----T-T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40938  5 -     88961 C--T------------------------C-----T-T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5637  5 -     39403 C--T------------------------C-----T-T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40591  5 +     87928 C--T------------------------C-----T-T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5634  5 -     60166 C--T------------------------C-----T-T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12570  5 -     67232 C--T------------------------C-----T-T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40486  5 -     90634 C--T------------------------C-----T-T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41954  5 +     89403 C--T------------------------C-----T-T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175488  5 - 189387572 T--T------------------------C-----C-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190306  5 -   9816681 T--T------------------------C-----C-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25134  3 +     69807 ----------------------------C-----T-T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42329  3 -     80239 ----------------------------c-----t-t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563965  5 -   2598838 t--t------------------------c-----t-t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1601  5 -      7103 t--t------------------------c-----t-t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2198  5 -     11706 t--t------------------------c-----t-t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5934  5 -     30655 t--t------------------------c-----t-t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32259  5 +     46564 t--t------------------------c-----t-t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92530  5 -     98465 t--t------------------------c-----t-t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6167  5 +     35169 t--t------------------------c-----t-t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34079  6 +     52041 tttt------------------------c-----a--
i Psammomys_obesus.NESX01036366.1                        I 1 I 1
s Pteronotus_parnellii.KE847780.1                            49812  4 -     66298 t--t------------------------t-----c--
i Pteronotus_parnellii.KE847780.1                        I 1 C 0
s Pteropus_alecto.KB030862.1                               5838779  4 -  28871421 t--t------------------------t-----t--
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             3535345  2 -   4952924 t--t---------------------------------
i Pteropus_vampyrus.KN525825.1                           I 1 I 1
s Puma_concolor.QAVW01001104.1                            18096803  5 +  38429054 ct-t------------------------t-----t--
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24544  3 +     91421 ----------------------------C-----T-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151037  3 -   7812017 ----------------------------C-----T-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5414  3 +     72585 ----------------------------C-----T-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020357  4 -  90668790 T--T------------------------C-----A--
i Rattus_norvegicus.chr16                                I 1 I 1
s Rhinolophus_sinicus.LVEH01000134.1                       2911435  4 +   3329780 t--g------------------------t-----t--
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 I 1
s Rhinopithecus_bieti.k119_221883                            26354  3 +     27361 ----------------------------c-----t-t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119721  3 + 195417433 ----------------------------c-----t-t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233962  3 -   7961872 ----------------------------c-----t-t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72762  4 -    116970 t--t------------------------t-----c--
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 1 C 0
s Saguinus_bicolor.k141_1429097                               1734  7 +     27962 ---C---------------------TGTC-----T-G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1742  7 +      6077 ---C---------------------TGTC-----C-G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1761  7 +      5971 ---C---------------------TGTC-----T-G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1815  7 +      5932 ---C---------------------TGTC-----T-G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                                 3  3 -      4390 ----------------------------C-----T-G
i Saguinus_labiatus.k141_2380921                         N 0 C 0
s Saguinus_midas.LG03                                       389082  7 - 209938924 ---C---------------------TGTC-----T-G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1763  7 +      5979 ---C---------------------TGTC-----T-T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2129  7 -      4301 ---C---------------------TGTC-----C-G
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236216  7 +   5703754 ---T---------------------TTTC-----T-T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5806  7 +     21866 ---T---------------------TTTC-----T-T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113976  4 +    313613 t--t------------------------t-----t--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22861  3 +     27374 ----------------------------C-----T-T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26380  3 +     58920 ----------------------------C-----T-T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12876  3 -     45317 ----------------------------C-----T-T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20534  3 -     42441 ----------------------------C-----T-T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23214  3 -     29113 ----------------------------C-----T-T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26283  3 -     48123 ----------------------------C-----T-T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46442  4 +     77746 T--C------------------------T-----A--
i Sigmodon_hispidus.SigHis_scaffold_20193                I 250 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126            1856279  4 -   1910179 t--t------------------------t-----t--
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866249  2 +   3870691 ----------------------------------t-t
i Spermophilus_dauricus.KZ294078.1                       I 1 I 2
s Suricata_suricatta.SurSur_flattened_line_6629             122486  5 +    196729 ct-t------------------------t-----t--
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388496  5 +   1523678 T--T------------------------C-----T-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11589  4 +     22964 t--t------------------------t-----t--
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 597  4 +      5583 t--t------------------------t-----t--
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189312  4 +    199430 t--t------------------------t-----t--
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103268  4 -    539355 T--T------------------------T-----T--
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4840  3 +      6850 T--T------------------------T--------
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4879  5 +     20590 T--T------------------------T-----T-C
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350736  5 - 186847797 t--t------------------------c-----t-t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22208  5 -     33621 T--A------------------------T-----T-T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_31955                   17722  4 -     31044 t--t------------------------t-----t--
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477629  4 -    610378 t--t------------------------t-----t--
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_1189070                        18425  3 +     26378 ----------------------------C-----T-T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31090  3 -     78344 ----------------------------C-----T-T
i Trachypithecus_crepusculus.k141_539312                 I 9 C 0
s Trachypithecus_cristatus.k141_180416                       17746  3 +     25722 ----------------------------C-----T-T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25971  3 -     62838 ----------------------------C-----T-T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26088  3 +     46913 ----------------------------C-----T-T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6896  3 -     28527 ----------------------------C-----T-T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27910  3 -     64340 ----------------------------C-----T-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25947  3 -     63452 ----------------------------C-----T-T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7390  3 +     22490 ----------------------------C-----T-T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          818  3 -      6147 ----------------------------C-----T-T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7793  3 -     13050 ----------------------------c-----t-t
i Trachypithecus_obscurus.k141_848057                    I 9 C 0
s Trachypithecus_phayrei.ctg124                             253032  3 -   6242583 ----------------------------c-----t-t
i Trachypithecus_phayrei.ctg124                          I 9 C 0
s Trachypithecus_pileatus.k141_2862967                       58782  3 +     59866 ----------------------------C-----T-T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831837  5 -   4065304 T--T------------------------G-----T-G
i Tupaia_chinensis.KB320699.1                            C 0 I 3
s Tupaia_tana.TupTan_flattened_line_394                       6078  5 -     70247 t--t------------------------g-----t-t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 14
s Uropsilus_gracilis.UroGra_scaffold_7153                   105200  4 -    105689 C--T------------------------T-----T--
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Varecia_rubra.k141_787544                                  23140  5 -     30710 t--t------------------------c-----t-t
i Varecia_rubra.k141_787544                              I 2 C 0
s Varecia_variegata.k141_289850                              22047  5 -    147434 t--t------------------------c-----t-t
i Varecia_variegata.k141_289850                          I 2 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172021  2 -    224448 ----------------------------------t-t
i Xerus_inauris.XerIna_scaffold_2302                     I 1 I 2
s Zapus_hudsonius.ZapHud_scaffold_230229                      1270  5 +      2695 T--T------------------------A-----C-T
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 6 I 35
e Microgale_talazaci.MicTal_scaffold_6613                    42585 403 +    145209 I
e Echinops_telfairi.JH980293.1                            62851496 405 - 111700974 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Zalophus_californianus.ZalCal_flattened_line_17732         26602  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                102950  0 -    112863 C
e Ursus_maritimus.KK499267.1                                179787  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              4436  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2438  0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        37226  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1449404  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                196186  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11466594  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14352661  0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         6207  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23717  0 -     74585 C
e Lycaon_pictus.CM007581.1                                41612586  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        811197  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913848  0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45105012  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41613431  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          220296  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     6953  0 -     23171 C
e CanFam4.chr16                                           42503317  0 +  60362399 C
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20413267  0 +  29979442 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Prolemur_simus.MPIZ01000396.1                            1980511  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Loxodonta_africana.GL010049.1                           39078096  0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lemur_catta.scaffold_24                                 14757355  0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         14707  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          7707  0 -     42923 C
e Hapalemur_griseus.k141_763500                              58834  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             33965  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          12564  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              56878  0 -    111500 C
e Eulemur_rufus.k141_514691                                  40477  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            2754  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46027  0 -     97555 C
e Eulemur_macaco.k141_1562045                                21834  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51204  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             40879  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84306  0 +    112731 C
e Eulemur_collaris.k141_601111                               40347  0 -     70999 C
e Eulemur_albifrons.k141_51491                               12635  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3000 38 +     36723 C-C--T--------TT-GGT--CTT-CCAT-GG-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
s Acinonyx_jubatus.LLWD01001279.1                           810545 23 +   1699592 c-a--t--------tt-tct--cct-acgt-ga-act-t-------------c----------c------------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413267 26 +  29979442 ---------------------------cat-ga-ctt-g-------------c----------ttgatc-tccc---ct------------g-tt----t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15936 16 -     61208 ------------------------------------------------------------------ATT-ACTT---CT------------A-CTGT-TT
i Allactaga_bullata.AllBul_scaffold_20030                I 19 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45395 38 +     53615 c-c--t--------tt-tgt--ctt-gcgt-ga-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41335 38 +     44087 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         13975 38 -     21945 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15651 38 +     32033 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70101 39 -     84148 T-TACT--------TT-TGT--C-T-GCGT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42334 39 -     78289 A-CACT--------TT-TGT--C-T-GCGT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41780 39 +     55831 T-TACT--------TT-TGT--C-T-GCGT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40222 39 -     64179 T-TACT--------TT-TGT--C-T-GCGT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21868 39 -     24835 T-CACT--------TT-TGT--C-T-GCGT-GA-CTT-G-------------T----------TTGATT-TCTG---CT------------G-TT----T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38851 39 +     45454 T-CACT--------TT-TGT--C-T-GCGT-GA-CTT-G-------------T----------TTGATT-TCCG---CT------------G-TT----T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44549 39 +     70886 T-CACT--------TT-TGT--C-T-GCGT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6674 39 +     30854 T-TACT--------TT-TGT--C-T-GCGT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30813 39 +     42133 T-TACT--------TT-TGT--C-T-GCGT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174601 36 -    412891 c-c--t--------tt-cct--ctc-acat-ga-gtt-g-------------c----------tc-ac--ctag---ct------------g-tt----g
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48624 38 -     65372 C-C--T--------TT-TGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCCA---CT------------G-TT----T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42371 38 +     43593 C-C--T--------TT-TGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCCA---CT------------G-TT----T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670384 38 +   5030052 c-c--t--------tt-tgt--ctt-gCAT-GA-CTT-G-------------C----------TTGATT-TCCA---CT------------G-TT----T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22026 38 -     23494 C-C--T--------TT-TGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCCA---CT------------G-TT----T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7162 38 +      8415 C-C--T--------TT-TGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCCA---CT------------G-TT----T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13949 39 -     32367 t-t--t--------tt-ctt--ctc-atat-ga-ttt-a-------------c----------ttgattttctg---ct------------g-tt----t
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 2 C 0
s Arctocebus_calabarensis.k141_1364444                       18205 39 -     45910 C-T--T--------TT-CCT--TTC-ACAT-GGGCTT-A-------------C----------TTGATT-TCAT---CT------------G-TT----T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2887 35 -     15198 c-c--t--------tt-cct--ttc-acat-ga-gtt-t-------------c----------ct--t--ctag---ct------------g-tt----t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272612 40 +  21539123 T-CACT--------TT-GGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8779 40 +     48076 T-CACT--------TT-GGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3916 40 -     28759 T-CACT--------TT-GGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31469 40 +     44353 T-CACT--------TT-GGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46840 40 -     71267 T-CACT--------TT-GGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20899 40 -     33135 T-CACT--------TT-GGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4091 38 +     11645 c-c--t--------tt-cct--ttc-acat-gg-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4097 38 -     19611 c-c--t--------tt-cct--ttc-acat-gg-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5805 38 +     28062 C-C--T--------TT-TGT--CTT-GCTT-GA-CTT-G-------------C----------CTGATT-TCCG---CT------------G-TC----T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41099 38 -     91139 C-C--T--------TT-TGT--CTT-GCTT-GA-CTT-G-------------C----------CTGATT-TCCG---CT------------G-TC----T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18625 38 +     95584 C-C--T--------TT-TGT--CTT-GCTT-GA-CTT-G-------------C----------CTGATT-TCCG---CT------------G-TC----T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18538 38 +    119600 C-C--T--------TT-TGT--CTT-GCTT-GA-CTT-G-------------C----------CTGATT-TCCG---CT------------G-TC----T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8014 39 +     18648 C-C--T--------TT-TGT--CTTNGCAT-GA-CTT-G-------------C----------TTGATT-TCTG---CT------------G-TT----T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7677 38 -     13885 C-C--T--------TC-TGT--CTT-GCAT-GA-CTT-C-------------C----------TCGATT-TCTG---TT------------G-TT----T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16375 39 +     17162 C-C--T--------TT-TGT--CTTNGTAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451330 39 + 189096842 C-C--T--------TT-TGT--CTTNCTAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17623 39 -     18408 C-C--T--------TT-TGT--CTTNGTAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503317 26 +  60362399 ---------------------------cat-ga-ctt-t-------------c----------ttgatc-tcag---ct------------a-tt----t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6953 26 -     23171 ---------------------------cat-ga-ctt-t-------------c----------ttgatc-tcag---ct------------a-tt----t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220296 26 +   9314153 ---------------------------CAT-GA-CTT-T-------------C----------TTGATC-TCAG---CT------------A-TT----T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613431 26 +  59632846 ---------------------------cat-ga-ctt-t-------------c----------ttgatc-tcag---ct------------a-tt----t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105012 26 -  63665305 ---------------------------cat-ga-ctt-t-------------c----------ttgatc-tcag---ct------------a-tt----t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268153 38 +    496798 c-c--t--------tt-tct--ctg-acaG-GT-CTT-G-------------C----------TTGATC-TCGG---TT------------G-TT----T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2957 35 +      5315 c-c--t--------tt-cct--ttc-acat-ga-gtt-g-------------c----------tt--t--cttg---ct------------g-tt----t
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993878 39 +  23392119 c-c--t--------tt-agc--ctc-acat-ca-ctt-g-------------g----------ttgatttttca---ct------------g-tt----t
i Cavia_aperea.AVPZ01000300.1                            I 2 C 0
s Cavia_porcellus.DS562891.1                               4997320 39 +  23407841 c-c--t--------tt-agc--ctc-acat-ca-ctt-g-------------g----------ttgatttttca---ct------------g-tt----t
i Cavia_porcellus.DS562891.1                             I 2 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60421 39 -     66877 C-C--T--------TT-AGC--CTC-ACAT-CA-CTT-G-------------G----------TTGATTTTTCA---CT------------G-TT----T
i Cavia_tschudii.CavTsc_scaffold_23560                   I 2 C 0
s Cebuella_niveiventris.k141_592277                           2909 39 -     12580 C-C--T--------TT-TGT--CTTNGCAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40795 39 +     53515 C-C--T--------TT-TGT--CTTNGCAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369003 38 -  26074798 C-C--T--------CT-TGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5892 38 -     34880 C-C--T--------CT-TGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                64987 38 -     89041 C-C--T--------TT-TGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1325 38 -      1636 C-C--T--------TT-TCA--CTG-ACAG-AT-CTT-G-------------C----------TTGATC-TCGG---TT------------G-TT----T
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490065 36 -  27778364 t-c--t--------tt-cct--ctc-atgt-ca-ctt-g-------------c----------ttgat---cag---ct------------c-ct----t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16898 36 +     27315 t-c--t--------tt-cct--ctc-atgt-ca-ctt-g-------------c----------ttgat---cag---ct------------c-ct----t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138574 38 -   4669795 c-c--t--------tt-tgt--ctt-gTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42314 38 +     47900 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42147 38 -     44860 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42130 38 -    148725 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25228 38 -     40656 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5197 38 +     20796 C-C--T--------TT-TGT--CTT-GCGT-GA-CCT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9387 38 -     17524 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25109 38 -     34525 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9818 38 -     25376 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362417 38 -  39242232 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268125 38 +  21565898 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29586 38 -     45857 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25406 38 -     32606 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1559 38 +      8499 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23078 38 +     70610 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20003 38 +     36323 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10715 38 -     19938 c-t--t--------tt-cct--ctc-atat-ga-ctt-g-------------c----------ttgatt-gcag---tg------------g-tt----t
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28525 38 -     33796 C-C--T--------TT-CCT--CTC-CCAT-GG-CTT-G-------------C----------TTGATT-TCAG---CT------------G-AT----C
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3055 38 -     15404 c-c--t--------tt-cct--ctc-ccat-gg-ctt-g-------------c----------ttgatt-tcag---ct------------g-at----c
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6891 38 -     32913 C-C--T--------TC-TGT--CTT-GCGT-GA-CTC-G-------------C----------CTGGTT-TCCG---CT------------G-TC----T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17304 38 -     40346 C-C--T--------TC-TGT--CTT-GCGT-GA-CTC-G-------------C----------CTGGTT-TCCG---CT------------G-TC----T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17559 38 +    216457 C-C--T--------TC-TGT--CTT-GCGT-GA-CTC-G-------------C----------CTAGTT-TCCG---CT------------G-TC----T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17352 38 +     39636 C-C--T--------TC-TGT--CTT-GCGT-GA-CTC-G-------------C----------CTGGTT-TCCG---CT------------G-TC----T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1743 38 +      5346 C-C--T--------TT-TGT--CGT-GCGT-GA-CTG-G-------------C----------TTGATT-TCCG---CT------------G-TC----C
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40445 38 -    112038 C-C--T--------TT-TGT--CTT-GCTT-GA-CTT-G-------------C----------CTGATT-TCCG---CT------------G-TC----T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6017 38 +     34062 C-C--T--------TT-TGT--CTT-GCTT-GA-CTT-G-------------C----------CTGATT-TCCG---CT------------G-TC----T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340900 38 +  18827391 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7445 38 -     44032 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302225 38 - 135778131 c-c--t--------tt-tgt--ctt-gCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406660 38 -   2368649 c-c--t--------tt-tgt--ctc-gCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      375823 38 - 200372422 c-c--t--------tt-tgt--ctc-gcgt-ga-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Colobus_guereza.LG01                                   T 713 I 713
s Colobus_polykomos.k141_906115                                 85 38 -     84244 c-c--t--------tt-tgt--ctc-gcgt-ga-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805183 38 +  53390261 c-c--t--------ac-ctt--CTT-ACAT-GG-CTT-G-------------C----------TTGCAT-TTAG---CT------------C-TT----T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           657 35 -      8242 t-c--t--------tt-tct--ttc-atgt-ga-ttt-g-------------c----------ttgat--ct-----ct------------g-tt----t
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40217 38 -     83289 C-C--T--------TT-CTT--CTC-ACAT-GG-CTT-A-------------C----------TTGACT-TCTA---CT------------C-TT----C
i Cricetomys_gambianus.CriGam_scaffold_14425             I 1 C 0
s Cricetulus_griseus.LT883664.1                          213112399 37 - 224834208 C-C--T--------TT-CTT--CTC-ACAA-GA-TTT-A-------------T-----------TAATT-TGTA---CT------------G-TT----c
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1821 33 +     87169 c-a--t--------tt-tct--cct-acat-ga-ctt-g-------------cttgatctcagc------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    642758 38 -   1526836 C-C--T--------TT-CTC--TTC-CCAT-GA-CTT-A-------------T----------TAGATT-TCTA---CT------------G-TT----T
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2861 38 +     50838 c-c--t--------tt-t--gtttc-atgt-aa-ttt-a-------------g----------ctaatt-tcca---ct------------g-tt----t
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 2 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1504 38 +     36344 C-C--T--------TT-TGT--CTC-ACAT-AA-CTT-A-------------G----------TTGATT-TCCA---CT------------G-TT----T
i Cuniculus_paca.CunPac_flattened_line_7025              I 2 C 0
s Dasypus_novemcinctus.JH564415.1                          2108050 38 -   2246927 c-c--t--------tt-cct--ctc-ttat-ga-ctt-g-------------c----------ttgatg-gcag---tg------------t-tt----t
i Dasypus_novemcinctus.JH564415.1                        C 0 I 6
s Daubentonia_madagascariensis.ctg71                        290472 38 +  12879189 c-c--t--------cc-cct--ttc-acaa-gt-cgc-g-------------c----------ttgatt-tcgg---ct------------c-tt----t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862623 36 -  20541912 c-t--t--------tt-cct--ttc-acat-ga-gtt-g-------------c----------tt-at--ctag---ct------------g-tt----t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662357 36 -   1390856 t-c--t--------tt-cct--ctc-acgt-ca-ctt-g-------------c----------tttat---cag---ct------------c-tt----t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137142 36 -    198055 t-c--t--------tt-cct--ctc-atgt-ca-ctt-g-------------c----------ttgat---cag---ct------------c-tt----t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96234 36 -    115145 C-C--T--------TT-C----CTC-ACAT-AA-CTT-G-------------G----------TTGATT-TCCT---CT------------G-TT----T
i Dinomys_branickii.DinBra_scaffold_10381                I 2 C 0
s Dipodomys_ordii.KN672350.1                              18948273 58 -  37912305 c-c--t--------tt-ccc--ttt-ataT-CA-CAG-A----TCCACTGTTT----------TGAATT-TCTA---CATGGGTTCT-GGAG-TC----T
i Dipodomys_ordii.KN672350.1                             I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3220 58 -     10735 C-C--T--------TT-CCC--TTT-ATAT-CA-CAG-A----TCCACTGTTT----------TGAATT-TCTA---CATGAATTCT-GGAG-TC----T
i Dipodomys_stephensi.DipSte_scaffold_89095              I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7824 39 +     14636 C-C--T--------TT-TGC--CTC-ACAT-CA-CTT-A-------------G----------TTGATTTTTCA---CT------------G-TT----T
i Dolichotis_patagonum.DolPat_scaffold_80628             I 2 C 0
s Eidolon_helvum.AWHC01266696.1                               4189 37 +     19438 t-c--t--------tt-cct--ttc-acat-ga-ctt-g-------------t----------ttgat--tcag---ct------------g-tt----t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105386 11 -  10337057 C-A--T--------TT-TCA-ACA----------------------------------------------------------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 7
s Ellobius_lutescens.LOEQ01008920.1                          28425 37 +    110024 C-C--T--------CT-CTT--CTC-AGAA-GA-CTA-A-------------C-----------TGAAA-TCTA---CT------------G-TT----C
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01026522.1                           10389 37 +     18970 C-C--T--------CT-CTT--CTC-AGAA-GA-CTT-A-------------C-----------TGAAA-TCTA---CT------------G-TT----C
i Ellobius_talpinus.LOJH01026522.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               24913848 26 +  41312741 ---------------------------cat-ga-cct-g-------------c----------ttgatc-tctg---ct------------g-tt----t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576257 36 +  14770903 t-c--t--------tt-cct--ctc-acat-ga-ctt-g-------------c----------tt-at--c-------t-------a-aatg-tt----t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039338 37 -   4378816 t-c--t--------tt-cct--ctc-acattga-ctt-a-------------c----------ttgat---cag---cc------------c-tt----t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373272 37 +  39960074 t-c--t--------tt-cct--ctc-acattga-ctt-a-------------c----------ttgat---cag---cc------------c-tt----t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410058 37 -    498745 t-c--t--------tt-cct--ctc-acattga-ctt-a-------------c----------ttgat---cag---cc------------c-tt----t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260423 38 +  21539334 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12635 30 -     24895 ----------------------TTC-ACAT-GG-GTt-g-------------c----------ttgatt-tcag---ct------------c-tt----t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40347 30 -     70999 ----------------------TTC-ACAT-GG-GTt-g-------------c----------ttgatt-tcag---ct------------c-tt----t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84306 30 +    112731 ----------------------TTC-AAAT-GG-GTt-g-------------c----------ttgatt-tcag---ct------------c-tt----t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40879 30 +     68309 ----------------------TTC-ACAT-GG-GTt-g-------------c----------ttgatt-tcag---ct------------c-tt----t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51204 30 -     65740 ----------------------TTC-ACAT-GG-GTT-G-------------C----------TTGATT-TCAG---CT------------C-TT----T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21834 30 -     75513 ----------------------TTC-ACAT-GG-GTT-G-------------C----------TTGATT-TCAG---CT------------C-TT----T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46027 30 -     97555 ----------------------TTC-AAAT-GG-GTT-G-------------C----------TTGATT-TCAG---CT------------C-TT----T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2754 30 +     30972 ----------------------TTC-ACAT-GG-GTt-g-------------c----------ttgatt-tcag---ct------------c-tt----t
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40477 30 -     52037 ----------------------TTC-ACAT-GG-GTt-g-------------c----------ttgatt-tcag---ct------------c-tt----t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56878 30 -    111500 ----------------------TTC-ACAT-GG-GTt-g-------------c----------ttgatt-tcag---ct------------c-tt----t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244451 23 - 206538554 c-a--t--------tt-tct--cct-acat-ga-act-t-------------c----------c------------------------------------
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                          185114237 23 - 205367284 c-a--t--------tt-tct--cct-acaT-GA-ACT-T-------------C----------C------------------------------------
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_31944                 25340 24 -     30238 c-a-tt--------tt-tct--cct-acat-ga-act-t-------------c----------c------------------------------------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 1
s Galago_moholi.ctg3793                                     122216 38 -    137831 c-t--t--------tt-cct--ttc-acat-gg-ctt-g-------------c----------ttgatt-tcat---ct------------g-tt----t
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5756 38 +     22493 c-t--t--------tt-cct--ttc-acat-gg-ctt-g-------------c----------ttgatt-tcat---ct------------g-tt----t
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17798 38 -     32986 c-t--t--------tt-cct--ttc-acat-gg-ctt-g-------------c----------ttgatt-tcat---ct------------g-tt----t
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               4817 38 +      5976 c-c--t--------tt-cct--ctc-acat-ga-ttt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Galeopterus_variegatus.GalVar_scaffold_132127          I 42 I 122
s Gorilla_beringei.k141_3358147                               3337 38 -      8343 C-C--T--------TT-GGT--CTT-CCAT-GG-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 68809 38 +  33314783 c-c--t--------tt-ggt--ctt-ccat-gg-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Gorilla_gorilla.LT578336.1                             I 56 I 6
s Hapalemur_alaotrensis.k141_330369                          12564 30 -     40692 ----------------------TTC-ACAT-GG-GTt-g-------------c----------ttgatt-tcag---ct------------c-tt----t
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33965 30 +     49394 ----------------------TTC-ACAT-GG-GTt-g-------------c----------ttgatt-tcag---ct------------c-tt----t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58834 30 -     66874 ----------------------TTC-ACAT-GG-GTt-g-------------c----------ttgatt-tcag---ct------------c-tt----t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7707 30 -     42923 ----------------------TTC-ACAT-GG-GTt-g-------------c----------ttgatt-tcag---ct------------c-tt----t
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14707 30 -     53142 ----------------------TTC-ACAT-GG-GTt-g-------------c----------ttgatt-tcag---ct------------c-tt----t
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28325 33 -    327341 c-a--t--------tt-tct--cct-acgt-ga-ctt-g-------------cttgatctcagc------------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Heterocephalus_glaber.JH602082.1                         1924933 38 -  22651954 c-c--t--------tt-cct--ctc-acaT-AA-CTT-A-------------G----------TTGATT-TCCA---CT------------G-TT----T
i Heterocephalus_glaber.JH602082.1                       I 2 I 33
s Hipposideros_armiger.JXIK01000431.1                      1548093 46 -   1711038 t-t--gttttcctctt-cct--gtc-acat-ga-ctt-g-------------c----------ttgat-ctcag---ct------------g-tt----t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47409 46 +     49977 t-t--gttttcctttt-cct--gtc-acat-ga-ctt-g-------------c----------atgat-ctcag---ct------------g-tt----t
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140341 38 -    630532 C-C--T--------TT-TGT--CTT-GCAT-GA-TTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66810 33 +     83186 T-A--T--------TT-TCT--CCT-GCAT-GA-CTT-G-------------CTTGCTTTCAAC------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69291 39 +    143317 C-C--T--------TT-TGC--CTC-ACCT-CA-CCT-A-------------G----------TTGATTTTTCA---CT------------G-TT----T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 2 C 0
s Hylobates_agilis.k141_1155965                               3376 38 +     12352 C-C--T--------TT-TGT--CTT-GCAT-GA-TTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10559 38 +     55766 C-C--T--------TT-TGT--CTT-GCAT-GA-TTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050155 38 + 191637585 C-C--T--------TT-TGT--CTT-GCAT-GA-TTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799033 38 +  11177569 C-C--T--------TT-TGT--CTT-GCAT-GA-TTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384684 38 +   7955117 c-c--t--------tt-ctt--ctc-acat-GA-CTT-A-------------C----------TTGATT-TCTA---CC------------A-TT----T
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Indri_indri.k141_2415743                                     211 38 +     11955 C-C--T--------TT-CCT--TTC-ACAT-GG-TTT-G-------------C----------TTGATT-TCTG---CT------------G-TT----T
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237121 16 +   9596543 ------------------------------------------------------------------ATT-ACTT---CT------------A-CTGT-TT
i Jaculus_jaculus.JH725527.1                             I 19 C 0
s Lagothrix_lagothricha.k141_246028                          41155 40 +    110728 T-CACT--------TT-GGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59733 36 -     65777 a-c--g--------gt-cct--ttt-acat-ga-ctt-g-------------c----------tt-tt--c-------t-------a-aata-tt----t
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 15
s Lemur_catta.scaffold_24                                 14757355 30 +  30322482 ----------------------TTC-ACAT-GG-ATt-g-------------c----------ttgatt-tcag---ct------------c-tt----t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1830 38 -     13097 C-C--T--------TT-TGT--CGT-GCAT-GA-CTG-G-------------C----------TTGATT-TCCG---CT------------G-TT----C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1781 38 +      5940 C-C--T--------TT-TGT--CGT-GCAT-GA-CTG-G-------------C----------TTGATT-TCCG---CT------------G-TT----C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1412 38 -      5717 C-C--T--------TT-TGT--CGT-GCAT-GA-CTG-G-------------C----------TTGATT-TCCG---CT------------G-TT----C
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8024 38 -     11567 C-C--T--------TT-TGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCTG---TT------------G-TT----T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9405 38 -     12945 C-C--T--------TT-TGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCTG---TT------------G-TT----T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6881 38 +     29618 C-C--T--------TT-CCC--TTC-CCAT-GG-CTT-G-------------C----------ATGATT-TCAG---GT------------G-TT----C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6878 38 +     31569 C-C--T--------TT-CCC--TTC-CCAT-GG-CTT-G-------------C----------ATGATT-TCAG---GT------------G-TT----C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6888 38 +     24756 c-c--t--------tt-ccc--ttc-ccat-gg-ctt-g-------------c----------atgatt-tcag---gt------------g-tt----c
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6882 38 +     16388 C-C--T--------TT-CCC--TTC-CCAT-GG-CTT-G-------------C----------ATGATT-TCAG---GT------------G-TT----C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811197 26 -   3914936 ---------------------------cat-ga-ctt-g-------------c----------ttgatc-tcca---ct------------c-tt----t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               330527 38 -   1826925 T-A--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            7995 38 +     19643 C-T--T--------TT-CCT--TTC-CCAT-GG-CTT-A-------------C----------TTGATT-TCAT---CT------------A-TT----T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041655 38 -   6120653 C-T--T--------TT-CCT--TTC-CCAT-GG-TTT-A-------------C----------TTGATT-TCAT---CT------------A-TT----T
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612586 26 +  59628241 ---------------------------cat-ga-ctt-t-------------c----------ttgatc-tcag---ct------------a-tt----t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42844 38 -     61512 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370505 38 -  60120075 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22760 38 +     30207 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19863 38 -     24934 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22712 38 +     30527 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33902 38 -     50087 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43673 38 +     51645 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412841 38 - 187317192 c-c--t--------tt-tgt--ctt-gTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397064 38 +  25927173 c-c--t--------tt-tgt--ctt-gTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46228 38 -     62418 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22883 38 +     24253 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42704 38 +     59329 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268637 38 +    668171 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19818 38 +     21031 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  415 38 +     17132 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221154 37 -    270270 t-c--g--------tt-cct--ttc-acgt-ga-ctt-g-------------t----------ttgat--tcag---ct------------g-tt----t
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319915 38 +  24302211 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354747 38 -    752769 C-C--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671437 38 -    737560 c-c--t--------tt-cct--ctc-acat-ga-ctt-g-------------c----------ttgatc-tcag---ct------------g-tt----t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218730 38 +    317179 c-c--t--------tt-cct--ctc-acat-ga-ctt-g-------------c----------ttgatc-tcag---ct------------g-tt----t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498893 38 +  40650429 t-c--t--------tt-ctt--ctc-acat-GA-CTT-A-------------C----------CTGATT-TCTA---CC------------A-TT----T
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148361 29 +    207569 t-c--t--------tt-tct--ttc-gtgt-ga-ctt-g-------------c----------ttgat--tt----------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 4
s Mellivora_capensis.MelCap_flattened_line_19308             23717 26 -     74585 ---------------------------cat-ga-ctt-g-------------c----------ttgatc-tctc---ct------------g-tt----t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46548 38 -    140813 C-C--T--------TT-CTT--CTC-ACAT-GA-CTT-G-------------C----------TTGATT-TCTA---CT------------A-TT----C
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 C 0
s Mesocricetus_auratus.KB708134.1                         17426924 37 +  29670104 c-c--t--------tt-ctt--ctc-acaa-ga-ttt-a-------------t-----------ttatt-tgta---ct------------g-tt----c
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mico_argentatus.k141_582562                                 7786 39 +     17804 C-C--T--------TT-TGT--CTTNGCAT-GA-CTT-G-------------C----------TTGATT-TCTG---CT------------G-TT----T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8570 39 -     12984 C-C--T--------TT-TGT--CTTNGCAT-GA-CTT-G-------------C----------TTGATT-TCTG---CT------------G-TT----T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16521 39 -     26561 C-C--T--------TT-TGT--CTTNGCAT-GA-CTT-G-------------C----------TTGATT-TCTG---CT------------G-TT----T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982493 38 +  93316391 c-c--t--------tt-cct--ttc-ccat-gG-CTT-G-------------C----------TTGATT-TCAG---CT------------G-AC----T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182571 36 +    200668 c-c--c--------tg-cct--ttc-acat-ga-gtt-g-------------c----------tt-at--ctag---ct------------g-tt----t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19942 38 -     27822 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6207 26 +     27589 ---------------------------cat-ga-ctt-g-------------c----------ttgatc-tcca---ct------------c-tt----t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50304 18 -     62432 --------------------------------------g-------------c----------ttgatt-tcag---ct------------g-ac----t
i Mirza_zaza.k141_766280                                 I 16 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176754 37 +    366855 TCC--T--------TT-CCT--TTC-ACAT-GA-GTT-G-------------C----------TT-AT--CTAG---CT------------G-TT----T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16080 33 -     63510 c-a--t--------tt-tct--cct-acat-ga-ctt-g-------------cttgatctcagc------------------------------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 1
s Murina_feae.MurFea_scaffold_17764                          36601 36 +     47283 c-c--t--------tt-cct--ttc-acat-ga-ctt-g-------------c----------tt-at--c-------t-------a-aatg-tt----t
i Murina_feae.MurFea_scaffold_17764                      I 3 C 0
s Mus_caroli.FMAL02030609.1                                    314 51 +      5579 C-C--T--------TT-ATT--CTC-CCAT-Ga-ctt-atttaatttacttat----------tttatt-tcta---tt------------g-tt----c
i Mus_caroli.FMAL02030609.1                              I 1 C 0
s Mus_musculus.chr8                                       41682269 51 + 129401213 C-C--T--------TT-ATT--CTC-CCAT-GA-ctt-atttaatttacttat----------tttatt-tcta---tt------------g-tt----c
i Mus_musculus.chr8                                      I 1 C 0
s Mus_spretus.CM004101.1                                  39489881 51 + 130317789 C-C--T--------TT-ATT--CTC-CCAT-GA-CTT-Atttaacttacttat----------tttatt-tcta---tt------------g-tt----c
i Mus_spretus.CM004101.1                                 I 1 C 0
s Mustela_putorius.JH418006.1                             14352661 26 +  14710649 ---------------------------tat-ga-ctt-g-------------c----------ttgatc-tctg---ct------------g-tt----t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790645 36 +  10118263 n-n--n--------nn-nnn--nnn-nnnn-na-ctt-g-------------c----------tt-at--c-------t-------a-aatg-tt----t
i Myotis_brandtii.KE162005.1                             I 2 C 0
s Myotis_davidii.KB100139.1                                4385007 36 +   6019432 c-c--t--------tt-cct--ttc-aaat-ga-ctt-g-------------c----------tt-at--c-------t-------a-aatg-tt----t
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                               380827 36 +   4330536 c-c--t--------tt-cct--ttc-atat-ga-ctt-g-------------c----------tt-at--c-------t-------a-aatg-tt----t
i Myotis_lucifugus.GL429869.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_423922                         377 36 +       920 C-C--T--------TT-CCT--TTC-ATAT-GA-CTT-G-------------C----------TT-AT--C-------T-AAAT-------G-TT----T
i Myotis_myotis.MyoMyo_scaffold_423922                   I 224 I 155
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117483 38 +    130748 c-c--t--------tt-cct--ccc-acat-ga-ctt-g-------------c----------tcgatt-gcag---ct------------g-tt----t
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26523 38 +     34575 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466594 26 -  31847680 ---------------------------cat-ga-ctt-g-------------c----------ttgatc-tcca---ct------------c-tt----t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125549 36 -    149072 C-C--T--------TT-CCT--TTT-ACAC-AA-GTT-G-------------C----------TT-AC--CTAG---CT------------T-CT----T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51265 38 -    132029 C-C--T--------TT-TGT--CTT-GCAT-GA-TTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7360 38 -     16345 C-C--T--------TT-TGT--CTT-GCAT-GA-TTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13245 38 +     22201 C-C--T--------TT-TGT--CTT-GCAT-GA-TTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411529 38 -  22158432 C-C--T--------TT-TGT--CTT-GCAT-GA-TTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23643 38 -     54323 C-C--T--------TT-TGT--CTT-GCAT-GA-TTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196186 26 +   9404916 ---------------------------cat-ga-ctt-t-------------c----------ttgatc-tcag---ct------------a-tt----t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93633963 38 + 196305487 C-T--T--------TT-CCT--TTC-ACGT-GG-TTT-A-------------C----------TTGATT-TCAT---CT------------G-TT----T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              721 38 -      3937 C-T--T--------TT-CCT--TTC-ACGT-GG-TTT-A-------------C----------TTGATT-TCAT---CT------------G-TT----T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562213 38 - 199412804 C-T--T--------TT-CCT--TTC-ACGT-GG-CTT-A-------------C----------TTGATT-TCAT---CT------------G-TT----T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11045209 38 -  11899542 c-c--t--------tt-t--gtctc-atGT-AA-CTT-A-------------G----------TTGATT-TCCA---CT------------G-TT----t
i Octodon_degus.JH651603.1                               I 2 C 0
s Odobenus_rosmarus.KB229312.1                             1449404 26 +   2017862 ---------------------------cat-ga-ctt-g-------------c----------ttgatc-tcca---ct------------c-tt----t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90153 37 -    140218 C-C--T--------CT-CTT--CTC-AGAA-TA-TTT-A-------------C-----------TGAGA-TCTA---CT------------G-TT----C
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   104993 37 +    107918 C-C--T--------TT-TTT--CTC-ACAA-GA-CTT-A-------------C-----------TGATT-TCTA---CT------------C-TT----C
i Onychomys_torridus.OnyTor_scaffold_2487                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11277 39 -     14239 c-c--t--------ct-tct-tctc-acat-ga-caa-g-------------c----------ttgatc-tcaa---ct------------c-tt----t
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37226 26 +    559221 ---------------------------cat-ga-ctt-t-------------c----------ttgatc-tcag---ct------------a-tt----t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37337 38 -     51505 c-t--t--------tt-cct--ttc-acat-gg-ttt-g-------------c----------ttgatt-tcat---ct------------g-tt----t
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350351 38 +   1103335 c-t--t--------tt-cct--ttc-acat-gA-CTT-G-------------C----------TTGATT-TCAT---CT------------G-TT----T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.NBAG03001968.1                              1376 39 -     50635 C-C--T--------TT-GGT--CTT-CCAT-GG-CTT-G-------------C----------TTGATT-TCAG---CT------------GTTT----T
i Pan_troglodytes.NBAG03001968.1                         I 663 I 899
s Panthera_onca.PanOnc_flattened_line_3271                   22161 23 -    230217 c-a--t--------tt-tct--cct-acat-ga-act-t-------------c----------c------------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                              18459487 23 -  18783137 c-a--t--------tt-tct--cct-acat-ga-act-t-------------g----------g------------------------------------
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               3970207 23 +   8748460 c-a--t--------tt-tct--cct-acat-ga-act-t-------------c----------c------------------------------------
i Panthera_tigris.KE722367.1                             C 0 I 1
s Papio_anubis.CM001495.2                                   240755 38 - 183742232 c-a--t--------tt-tgt--ctt-gTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7219 38 +     21308 C-A--T--------TT-TGT--CTT-GTGT-GA-CTC-G-------------C----------TCGATT-TCGG---CT------------G-TT----T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288258 38 -  20919399 C-A--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19874 38 -     27687 C-A--T--------TT-TGT--CTT-GTGT-GA-CTC-G-------------C----------TCGATT-TCGG---CT------------G-TT----T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13010 38 +     16796 C-A--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19820 38 -     23640 C-A--T--------TT-TGT--CTT-GTGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12806 33 +     78924 g-a--t--------tt-tct--cct-acat-ga-ctt-g-------------cttgacctgagc------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_1921260                          23644 42 +     31479 C-T--T--------TT-CCT--TTC-ACAT-GGGCTT-A-------------C----------TTGATT-TCATTTTTT------------T-TT----T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16004 40 -     24908 C-T--T--------TT-CCT--TTC-ACAT-GGGCTT-A-------------C----------TTGATT-TCATT--TT------------T-TT----T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37474 58 +     38305 C-C--T--------TT-CCT--CTT-ACCT-GA-CAG-A----TCCACTGTTT----------TGAATT-TCGA---CATGTGTT-TCGGAG-TC----T
i Perognathus_longimembris.PerPac_flattened_line_28053   I 1 C 0
s Peromyscus_maniculatus.KI615324.1                         244638 38 +  18517816 c-c--t--------tttttt--ctc-ACGA-GA-CTT-A-------------C-----------TGATT-TCTA---CT------------G-TT----C
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29887 38 -     56120 C-C--T--------TT-CTT--CTC-TTGT-AA-CTT-G-------------G----------TTGATT-TCCA---CT------------G-TT----T
i Petromus_typicus.PetTyp_scaffold_17301                 I 2 C 0
s Piliocolobus_badius.k141_2495623                            6674 38 +      7560 C-C--T--------TT-TGT--CTC-GCGT-GA-CTT-G-------------C----------TTGATT-TCAA---CT------------G-TT----T
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62382 38 -     63152 C-C--T--------TT-TGT--CTC-GCAT-GA-CTT-G-------------C----------TTGATT-TCAA---CT------------G-TT----T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            44981 38 +     45295 C-C--T--------TT-TGT--CTC-GCAT-GA-CTT-G-------------C----------TTGATT-TCAA---CT------------G-TT----T
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2659 38 +      5735 c-c--t--------tt-tgt--ctc-gcAT-GA-CTT-G-------------C----------TTGATT-TCAA---CT------------G-TT----T
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              778 36 +     22231 a-c--t--------tt-cct--ttc-aaat-ga-ttt-g-------------c----------tt-at--c-------t-------a-aatg-tt----t
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62792 38 +    207309 C-C--T--------TT-TGT--CTT-GCTG-GA-CTT-G-------------C----------CTGATT-TCCG---CT------------G-TC----T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3888 38 -     25401 C-C--T--------TT-TGT--CTT-GCTG-GA-CTT-G-------------C----------CTGATT-TCCG---CT------------G-TC----T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29627 38 +     58159 C-C--T--------TT-TGT--CTT-GCTG-GA-CTT-G-------------C----------CTGATT-TCCG---CT------------G-TC----T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29903 38 +     63561 C-C--T--------TT-TGT--CTT-GCTG-GA-CTT-G-------------C----------CTGATT-TCCG---CT------------G-TC----T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29666 38 +     51148 C-C--T--------TT-TGT--CTT-GCTG-GA-CTT-G-------------C----------CTGATT-TCCG---CT------------G-TC----T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554635 38 -   4542175 C-C--T--------TT-TGT--CTT-GCTG-GA-CTT-G-------------C----------CTGATT-TCCG---CT------------G-TC----T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29650 38 +     51125 C-C--T--------TT-TGT--CTT-GCTG-GA-CTT-G-------------C----------CTGATT-TCCG---CT------------G-TC----T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6061 38 +     39866 C-C--T--------TC-TGT--CTT-GCGT-GA-CTC-G-------------C----------CTGGTT-TCCA---CT------------G-TC----T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1146 38 -      9282 C-C--T--------TC-TGT--CTT-GCGT-GA-CTC-G-------------C----------CTGGTT-TCCG---CT------------G-TC----T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40550 38 -     87950 C-C--T--------TC-TGT--CTT-GCGT-GA-CTC-G-------------C----------CTGGTT-TCCG---CT------------G-TC----T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40943 38 -     88961 C-C--T--------TC-TGT--CTT-GCGT-GA-CTC-G-------------C----------CTGGTT-TCCG---CT------------G-TC----T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5642 38 -     39403 C-C--T--------TC-TGT--CTT-GCGT-GA-CTC-G-------------C----------CTGGTT-TCCG---CT------------G-TC----T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40596 38 +     87928 C-C--T--------TC-TGT--CTT-GCGT-GA-CTC-G-------------C----------CTGGTT-TCCG---CT------------G-TC----T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5639 38 -     60166 C-C--T--------TC-TGT--CTT-GCGT-GA-CTC-G-------------C----------CTGGTT-TCCA---CT------------G-TC----T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12575 38 -     67232 C-C--T--------TC-TGT--CTT-GCGT-GA-CTC-G-------------C----------CTGGTT-TCCA---CT------------G-TC----T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40491 38 -     90634 C-C--T--------TC-TGT--CTT-GCGT-GA-CTC-G-------------C----------CTGGTT-TCCA---CT------------G-TC----T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41959 38 +     89403 C-C--T--------TC-TGT--CTT-GCGT-GA-CTC-G-------------C----------CTGGTT-TCCA---CT------------G-TC----T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175493 38 - 189387572 C-C--T--------TT-GGT--CTT-CCAT-GG-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190311 38 -   9816681 C-C--T--------TT-GGT--CTT-CCAT-GG-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25137 38 +     69807 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42332 38 -     80239 c-c--t--------tt-tgt--ctt-gcgt-ga-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980511 30 +   4620579 ----------------------TTC-ACAT-GG-GTT-G-------------C----------TTGATT-TCAG---CT------------C-TT----T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1563970 38 -   2598838 c-a--t--------tt-cct--ttc-acaT-GG-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1606 38 -      7103 c-g--t--------tc-cct--ttc-acat-gg-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2203 38 -     11706 c-g--t--------tt-cct--ttc-acat-ag-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5939 38 -     30655 c-g--t--------tt-cct--ttc-acat-gg-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32264 38 +     46564 c-g--t--------tt-cct--ttc-acat-ag-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92535 38 -     98465 c-g--t--------tt-cct--ttc-acat-gg-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6172 38 +     35169 c-g--t--------tt-cct--ttc-acat-gg-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34086 38 +     52041 c-c--t--------tt-ctt--ctc-ATAT-GA-CTT-G-------------T----------TTGATT-TCTA---CT------------G-TT----C
i Psammomys_obesus.NESX01036366.1                        I 1 C 0
s Pteronotus_parnellii.KE847780.1                            49816 37 -     66298 ccc--t--------tt-cct--ttc-agtt-ga-gtt-g-------------c----------tt-at--ctag---ct------------g-tt----t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2438 26 -     18639 ---------------------------cat-ga-ctt-g-------------c----------ttgatc-tctg---ct------------g-tt----t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838783 37 -  28871421 c-c--t--------tt-cct--ttc-atat-ga-ctt-g-------------t----------ttgat--tcag---ct------------g-tt----t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535348 37 -   4952924 c-c--t--------tt-cct--ttc-acat-ga-ctt-g-------------t----------ttgat--tcag---ct------------g-tt----t
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            18096808 23 +  38429054 c-a--t--------tt-tct--cct-acat-ga-act-t-------------c----------c------------------------------------
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             24547 38 +     91421 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151040 38 -   7812017 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5417 38 +     72585 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020362 51 -  90668790 C-C--T--------TT-CTT--CTC-ACAT-Ga-gct-attttatttacttac----------tttagt-TCTA---CT------------G-TT----T
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911440 46 +   3329780 t-t--gtttttctttt-cct--ttc-acat-ga-ctt-g-------------c----------tttat-ctcag---ct------------g-tt----t
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_221883                            26357 38 +     27361 c-c--t--------tt-tgt--ctt-gcgt-ga-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119724 38 + 195417433 c-c--t--------tt-tgt--ctt-gCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             233965 38 -   7961872 c-c--t--------tt-tgt--ctt-gcgt-ga-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72766 37 -    116970 c-c--t--------tt-ctt--ttc-acat-ga-ctt-g-------------t----------ttgat--tcag---ct------------g-tt----t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1741 38 +     27962 C-C--T--------TT-TGT--CGT-GCGT-GA-CTG-G-------------C----------TTGATT-TCCG---CT------------G-TC----C
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1749 38 +      6077 C-C--T--------TT-TGT--CGT-GCGT-GA-CTG-G-------------C----------TTGATT-TCCG---CT------------G-CC----C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1768 38 +      5971 C-C--T--------TT-TGT--CCT-GCGT-GA-CTG-G-------------C----------TTGATT-TCCG---CT------------G-TC----C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1822 38 +      5932 C-C--T--------TT-TGT--CCT-GCGT-GA-CTG-G-------------C----------TTGATT-TCCG---CT------------G-TC----C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                                 6 38 -      4390 C-C--T--------TT-TGT--CCT-GCGT-GA-CTG-G-------------C----------TTGATT-TCCG---CT------------G-TC----C
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389089 38 - 209938924 C-C--T--------TT-TGT--CGT-GCGT-GA-CTG-G-------------C----------TTGATT-TCCG---CT------------G-TC----C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1770 38 +      5979 C-C--T--------TT-TGT--CCT-GCGT-GA-CTG-G-------------C----------TTGATT-TCCG---CT------------G-TC----C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2136 38 -      4301 C-C--T--------TT-TGT--CGT-GCGT-GA-CTG-G-------------C----------TTGATT-TCCG---CT------------G-CC----C
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236223 38 +   5703754 C-C--T--------TT-TGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5813 38 +     21866 C-C--T--------TT-TGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCCG---CT------------G-TT----T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    113980 38 +    313613 c-c--t--------ac-ctt--ctt-acat-gg-ttt-g-------------c----------ttgagc-ttag---ct------------t-tt----t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22864 38 +     27374 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26383 38 +     58920 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12879 38 -     45317 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20537 38 -     42441 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23217 38 -     29113 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26286 38 -     48123 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46447 37 +     77746 C-C--T--------TT-CTT--CTC-ACAA-GA-TTT-A-------------T-----------TAATT-TCCA---TT------------G-TT----C
i Sigmodon_hispidus.SigHis_scaffold_20193                I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856283 39 -   1910179 c-c--t--------tt-tct--gtc-acag-ga-cttgg-------------c----------ttgatc-tcag---ct------------g-tt----t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866253 38 +   3870691 c-c--t--------tt-ctt--ttc-acat-GA-CTT-A-------------C----------TTGATT-TCTA---CC------------A-TT----T
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4436 26 -     97271 ---------------------------cat-ga-ctt-g-------------c----------ttgatc-tctg---tt------------g-tt----t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122491 33 +    196729 c-a--t--------tt-tct--cct-gcat-ga-ctt-g-------------cttgttctcagc------------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Symphalangus_syndactylus.tarseq_199                       388501 38 +   1523678 C-C--T--------TT-TGT--CTT-GCAT-GA-TTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11593 32 +     22964 c-c--t--------tt-cct--ttc-ccat-gg-ctt-g-------------c----------tt-at--c-------t------------g-tt----t
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 601 38 +      5583 c-c--t--------tt-cct--ccc-acat-ga-ctt-g-------------c----------tcgatt-gcag---ct------------g-tt----t
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189316 36 +    199430 t-c--t--------tt-tct--ctc-acat-ga-ctt-g-------------c----------ttgat---cag---ct------------g-tt----t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103272 36 -    539355 T-C--T--------TT-TCT--CTC-ACAT-GA-CTT-G-------------C----------TTGAT---CAG---CT------------G-TT----T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4843 38 +      6850 C-C--T--------TT-TCT--CTG-ATGG-GT-CTT-G-------------C----------TTGATC-TCAG---TT------------G-TT----T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4884 38 +     20590 C-C--T--------TT-TCT--CTG-ACGG-GT-CTT-G-------------C----------TTGATC-TCAG---TT------------G-TT----T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350741 38 - 186847797 c-c--t--------tt-tgt--ctt-gCGT-GA-CTT-G-------------C----------TTGATT-TCGG---CT------------G-TT----T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22215 38 -     33621 C-C--T--------TT-CTT--CTG-TCAT-AA-CTT-A-------------G----------TTGATT-TCCA---CT------------G-TT----T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17726 38 -     31044 c-c--t--------tt-cct--ctc-atat-ga-ctt-g-------------c----------ttgatt-gcag---tg------------g-tt----t
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477633 36 -    610378 c-c--t--------tt-cct--ttc-acat-ga-gtt-g-------------c----------tt-at--ctag---ct------------g-tt----t
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18428 38 +     26378 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31093 38 -     78344 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17749 38 +     25722 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      25974 38 -     62838 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26091 38 +     46913 C-T--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6899 38 -     28527 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27913 38 -     64340 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25950 38 -     63452 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7393 38 +     22490 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          821 38 -      6147 C-C--T--------TT-TGT--CTT-GCAT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7796 38 -     13050 c-c--t--------tt-tgt--ctt-gcgt-ga-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253035 38 -   6242583 c-c--t--------tt-tgt--ctt-gcgt-ga-ctt-g-------------c----------ttgatt-tcag---ct------------g-tt----t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58785 38 +     59866 C-C--T--------TT-TGT--CTT-GCGT-GA-CTT-G-------------C----------TTGATT-TCAG---CT------------G-TT----T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831845 24 -   4065304 -----------------------------T-GA-CTT-G-------------T----------TTGATT-TTAA---CT------------G-TT----T
i Tupaia_chinensis.KB320699.1                            I 3 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6097 24 -     70247 -----------------------------t-ga-ctt-g-------------t----------ttgatt-ttaa---ct------------g-tt----t
i Tupaia_tana.TupTan_flattened_line_394                  I 14 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105204 38 -    105689 C-C--T--------AG-CTT--CTC-ACAT-GG-TTT-G-------------C----------TTGAAC-TTAA---CT------------A-TT----T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179787 26 +   5085361 ---------------------------cat-ga-ctt-g-------------c----------ttgatc-tccc---ct------------g-tt----t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23145 38 -     30710 c-c--t--------tt-cct--ttc-acat-gg-ctt-g-------------c----------ttgatt-tcag---ct------------c-tt----t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22052 38 -    147434 c-c--t--------tt-cct--ttc-acat-gg-ctt-g-------------c----------ttgatt-tcag---ct------------c-tt----t
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102950 26 -    112863 ---------------------------cat-ga-ctt-t-------------c----------ttgatc-tcag---ct------------a-tt----t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172025 38 -    224448 c-c--t--------tt-ctt--ctc-acac-aa-ctt-a-------------c----------ttgatt-tcta---tc------------a-tt----t
i Xerus_inauris.XerIna_scaffold_2302                     I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26602 26 -     86975 ---------------------------cgt-ga-ctt-g-------------c----------ttgatc-tcca---gt------------c-tt----t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_211135                      1305 16 +      3117 ------------------------------------------------------------------ATT-TCTT---CT------------G-TT-TCTT
i Zapus_hudsonius.ZapHud_scaffold_211135                 I 140 I 88
e Microgale_talazaci.MicTal_scaffold_6613                    42585 403 +    145209 I
e Echinops_telfairi.JH980293.1                            62851496 405 - 111700974 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     13679  3 +     24238 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100566  3 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Loxodonta_africana.GL010049.1                           39078096  0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3038  6 +     36723 AGA----G----TC
s Acinonyx_jubatus.LLWD01001279.1                           810569  6 +   1699592 tga----g----tt
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413293  6 +  29979442 tga----g----tt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15952  6 -     61208 TGA----G----TC
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45433  6 +     53615 gga----g----tc
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41373  6 +     44087 GGA----G----TC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14013  6 -     21945 GGA----G----TC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15689  6 +     32033 GGA----G----TC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70140  6 -     84148 GGA----G----TC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42373  6 -     78289 GGA----G----TC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41819  6 +     55831 GGA----G----TC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40261  6 -     64179 GGA----G----TC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21907  6 -     24835 GGA----G----TC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38890  6 +     45454 GGA----G----TC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44588  6 +     70886 GGA----G----TC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6713  6 +     30854 GGA----G----TC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30852  6 +     42133 GGA----G----TC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174637  6 -    412891 tga----g----tc
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48662  6 -     65372 GGA----G----TC
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42409  6 +     43593 GGA----G----TC
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670422  6 +   5030052 GGA----G----TC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22064  6 -     23494 GGA----G----TC
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7200  6 +      8415 GGA----G----TC
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13988  6 -     32367 tga----g----tc
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18244  6 -     45910 TGA----A----TC
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2922  6 -     15198 tga----g----tg
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272652  6 +  21539123 GGA----G----TC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8819  6 +     48076 GGA----G----TC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3956  6 -     28759 GGA----G----TC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31509  6 +     44353 GGA----G----TC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46880  6 -     71267 GGA----G----TC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20939  6 -     33135 GGA----G----TC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4129  6 +     11645 tga----g----tc
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4135  6 -     19611 tga----g----tc
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5843  6 +     28062 GGA----G----TC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41137  6 -     91139 GGA----G----TC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18663  6 +     95584 GGA----G----TC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18576  6 +    119600 GGA----G----TC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8053  6 +     18648 GGA----G----TC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7715  6 -     13885 GGA----G----TC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16414  6 +     17162 GGA----G----TC
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451369  6 + 189096842 GGA----G----TC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17662  6 -     18408 GGA----G----TC
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503343  6 +  60362399 tga----g----tt
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6979  6 -     23171 tga----g----tt
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220322  6 +   9314153 TGA----G----TT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613457  6 +  59632846 tga----g----tt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105038  6 -  63665305 tga----g----tt
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268191  6 +    496798 TGA----G----GC
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_170178               2992  6 +      5315 tga----g----tc
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993917  6 +  23392119 taa----t----tc
i Cavia_aperea.AVPZ01000300.1                            C 0 I 2
s Cavia_porcellus.DS562891.1                               4997359  6 +  23407841 taa----t----tt
i Cavia_porcellus.DS562891.1                             C 0 I 2
s Cavia_tschudii.CavTsc_scaffold_23560                       60460  6 -     66877 TAA----T----TT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 2
s Cebuella_niveiventris.k141_592277                           2948  6 -     12580 GGA----G----TC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40834  6 +     53515 GGA----G----TC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369041  6 -  26074798 GGA----G----TC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5930  6 -     34880 GGA----G----TC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65025  6 -     89041 GGA----G----TC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1363  6 -      1636 TGA----G----GC
i Cephalopachus_bancanus.k141_72622                      C 0 I 1
s Ceratotherium_simum.JH767749.1                          15490101  6 -  27778364 tga----g----tc
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16934  6 +     27315 tga----g----tc
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138612  6 -   4669795 GGA----G----TC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42352  6 +     47900 GGA----G----TC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42185  6 -     44860 GGA----G----TC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42168  6 -    148725 GGA----G----TC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25266  6 -     40656 GGA----G----TC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5235  6 +     20796 GGA----G----TC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9425  6 -     17524 GGA----G----TC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25147  6 -     34525 GGA----G----TC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9856  6 -     25376 GGA----G----TC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362455  6 -  39242232 GGA----G----TC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268163  6 +  21565898 GGA----G----TC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29624  6 -     45857 GGA----G----TC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25444  6 -     32606 GGA----G----TC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1597  6 +      8499 GGA----G----TC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23116  6 +     70610 GGA----G----TC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20041  6 +     36323 GGA----G----TC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10753 10 -     19938 tca----tagtttc
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 2
s Cheirogaleus_major.k141_666340                             28563  6 -     33796 TGA----G----TC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3093  6 -     15404 tga----g----tc
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6929  6 -     32913 GGA----G----TC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17342  6 -     40346 GGA----G----TC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17597  6 +    216457 GGA----G----TC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17390  6 +     39636 GGA----G----TC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1781  6 +      5346 ACA----G----TC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40483  6 -    112038 GGA----G----TC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6055  6 +     34062 GGA----G----TC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340938  6 +  18827391 GGA----G----TC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7483  6 -     44032 GGA----G----TC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302263  6 - 135778131 GGA----G----TC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406698  6 -   2368649 GGA----G----TC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376574  6 - 200372422 gga----g----tc
i Colobus_guereza.LG01                                   I 713 C 0
s Colobus_polykomos.k141_906115                                123  6 -     84244 gga----g----tc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805221  6 +  53390261 TAA----G----TC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           692  6 -      8242 tga----t----tc
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40255  6 -     83289 ACA----G----TC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112436  6 - 224834208 aga----g----tc
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1855  6 +     87169 tga----g----tt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642796  6 -   1526836 AGA----G----TC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2899  6 +     50838 taa----g----tc
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 48
s Cuniculus_paca.CunPac_flattened_line_7025                   1542  6 +     36344 TAA----G----TC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 2
s Dasypus_novemcinctus.JH564415.1                          2108094  2 -   2246927 ------------tc
i Dasypus_novemcinctus.JH564415.1                        I 6 C 0
s Daubentonia_madagascariensis.ctg71                        290510  6 +  12879189 aga----g----tc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862659  6 -  20541912 tga----g----tc
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662393  6 -   1390856 tga----g----tc
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137178  6 -    198055 tga----g----tc
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96270  6 -    115145 TAA----G----TC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 153
s Dipodomys_ordii.KN672350.1                              18948331  6 -  37912305 ATG----G----TT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3278  6 -     10735 ATG----G----TT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7863  6 +     14636 TAA----G----TC
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 2
s Eidolon_helvum.AWHC01266696.1                               4226  6 +     19438 tga----g----tc
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105404  3 -  10337057 -------C----TT
i Elephantulus_edwardii.JH947257.1                       I 7 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28462  6 +    110024 AGA----G----TC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10426  6 +     18970 AGA----G----TC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913874  6 +  41312741 tga----a----tt
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576293  6 +  14770903 tga----c----tc
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039375  6 -   4378816 tga----g----tg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373309  6 +  39960074 tga----g----tg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410095  6 -    498745 tga----g----tg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260461  6 +  21539334 GGA----G----TC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12665  6 -     24895 tga----g----tc
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40377  6 -     70999 tga----g----tc
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84336  6 +    112731 tga----g----tc
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40909  6 +     68309 tga----g----tc
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51234  6 -     65740 TGA----G----TC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21864  6 -     75513 TGA----G----TC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46057  6 -     97555 TGA----G----TC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2784  6 +     30972 tga----g----tc
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40507  6 -     52037 tga----g----tc
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56908  6 -    111500 tga----g----tc
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244475  6 - 206538554 tga----g----ct
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                          185114261  6 - 205367284 TGA----G----CT
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25365  6 -     30238 tga----g----ct
i Felis_nigripes.FelNig_flattened_line_31944             I 1 C 0
s Galago_moholi.ctg3793                                     122254  6 -    137831 tga----g----tc
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5794  6 +     22493 tga----g----tc
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17836  6 -     32986 tga----g----tc
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17000  6 +     18121 tga----g----ac
i Galeopterus_variegatus.GalVar_scaffold_74466           I 38 C 0
s Gorilla_beringei.k141_3358147                               3375  6 -      8343 AGA----G----TC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252386  6 - 186649187 aga----g----tc
i Gorilla_gorilla.LT578341.1                             I 38 I 10
s Hapalemur_alaotrensis.k141_330369                          12594  6 -     40692 tga----g----tc
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             33995  6 +     49394 tga----g----tc
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58864  6 -     66874 tga----g----tc
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7737  6 -     42923 tga----g----tc
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14737  6 -     53142 tga----g----tc
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28359  6 -    327341 tga----g----tt
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Heterocephalus_glaber.JH602082.1                         1925004  6 -  22651954 taa----g----tc
i Heterocephalus_glaber.JH602082.1                       I 33 I 2
s Hipposideros_armiger.JXIK01000431.1                      1548139  6 -   1711038 tca----g----tt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47455  6 +     49977 tca----g----tt
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140379  6 -    630532 GGA----G----TC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66844  6 +     83186 TGA----G----TT
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69330  6 +    143317 TAA----G----TC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 2
s Hylobates_agilis.k141_1155965                               3414  6 +     12352 GGA----G----TC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10597  6 +     55766 GGA----G----TC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050193  6 + 191637585 GGA----G----TC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799071  6 +  11177569 GGA----G----TC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384722  6 +   7955117 TGT----G----TA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     249  6 +     11955 TGA----G----TC
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237137  6 +   9596543 TGA----G----TC
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Lagothrix_lagothricha.k141_246028                          41195  6 +    110728 GGA----G----TC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    29006  6 -     49555 TGA----C----TC
i Lasiurus_borealis.LasBor_scaffold_26245                I 105 C 0
s Lemur_catta.scaffold_24                                 14757385  6 +  30322482 tga----g----tc
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1868  6 -     13097 ACA----G----TC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1819  6 +      5940 ACA----G----TC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1450  6 -      5717 ACA----G----TC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8062  6 -     11567 GGA----G----TC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9443  6 -     12945 GGA----G----TC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6919  6 +     29618 TGA----G----TC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6916  6 +     31569 TGA----G----TC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6926  6 +     24756 tga----g----tc
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6920  6 +     16388 TGA----G----TC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811223  6 -   3914936 tga----g----ta
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     13682  2 +     24238 ------------GA
i Lepus_americanus.LepAme_scaffold_56121                 I 3 C 0
s Lophocebus_aterrimus.ctg367                               330565  6 -   1826925 GGA----G----TC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8033  6 +     19643 TGA----G----TC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041693  6 -   6120653 TGA----G----TC
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612612  6 +  59628241 tga----g----tt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42882  6 -     61512 GGA----G----TC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370543  6 -  60120075 GGA----G----TC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22798  6 +     30207 GGA----G----TC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19901  6 -     24934 GGA----G----TC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22750  6 +     30527 GGA----G----TC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33940  6 -     50087 GGA----G----TC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43711  6 +     51645 GGA----G----TC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412879  6 - 187317192 GGA----G----TC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397102  6 +  25927173 GGA----G----TC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46266  6 -     62418 GGA----G----TC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22921  6 +     24253 GGA----G----TC
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42742  6 +     59329 GGA----G----TC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268675  6 +    668171 GGA----G----TC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19856  6 +     21031 GGA----G----TC
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  453  6 +     17132 GGA----G----TC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221191  6 -    270270 tga----g----tc
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319953  6 +  24302211 GGA----G----TC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354785  6 -    752769 GGA----G----TC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671475  6 -    737560 tga----g----tc
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218768  6 +    317179 tga----g----tc
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498931  6 +  40650429 TGA----G----TA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148394  6 +    207569 tga----a----tc
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23743  6 -     74585 tga----a----tt
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46586  4 -    140813 --A----G----TC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 2
s Mesocricetus_auratus.KB708134.1                         17426961  6 +  29670104 aga----g----tc
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 7825  6 +     17804 GGA----G----TC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8609  6 -     12984 GGA----G----TC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16560  6 -     26561 GGA----G----TC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982531  6 +  93316391 TGA----G----TC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182607  6 +    200668 tga----a----tc
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19980  6 -     27822 GGA----G----TC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6233  6 +     27589 tga----g----ta
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50322  6 -     62432 tga----g----tc
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176791  6 +    366855 TGA----G----TC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16114  6 -     63510 tga----g----tt
i Mungos_mungo.MunMun_flattened_line_18455               I 1 C 0
s Murina_feae.MurFea_scaffold_17764                          36637  6 +     47283 tga----c----tc
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    365  4 +      5579 --A----G----CC
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41682320  4 + 129401213 --A----G----CC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39489932  4 + 130317789 --a----G----CC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                             14352687  6 +  14710649 tga----a----tt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790681  6 +  10118263 tga----c----tc
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385043  6 +   6019432 tga----c----tc
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380863  6 +   4330536 tga----c----tc
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3422  6 +      3929 TGA----C----TC
i Myotis_myotis.MyoMyo_scaffold_185951                   I 38 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117521 10 +    130748 tga----cagtctc
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26561  6 +     34575 GGA----G----TC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466620  6 -  31847680 tga----g----ta
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125585  6 -    149072 TGA----G----TC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51303  6 -    132029 GGA----G----TC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7398  6 -     16345 GGA----G----TC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13283  6 +     22201 GGA----G----TC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411567  6 -  22158432 GGA----G----TC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23681  6 -     54323 GGA----G----TC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196212  6 +   9404916 tga----a----tt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634001  6 + 196305487 TGA----G----TC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              759  6 -      3937 TGA----G----TC
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562251  6 - 199412804 TGA----G----TC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11045247  6 -  11899542 taa----g----tc
i Octodon_degus.JH651603.1                               C 0 I 50
s Odobenus_rosmarus.KB229312.1                             1449430  6 +   2017862 tga----g----tt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90190  6 -    140218 AGA----G----TC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105030  6 +    107918 AGG----G----TC
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11316 10 -     14239 ttactgtt----tc
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107100569  2 - 174332312 ------------NN
i Oryctolagus_cuniculus.CM000791.1                       I 3 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37252  6 +    559221 tga----g----tt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37375  6 -     51505 tga----g----tc
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350389  6 +   1103335 TGA----G----TC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.KZ622849.1                                 31074  6 -    110857 AGA----G----TC
i Pan_troglodytes.KZ622849.1                             I 174 I 194
s Panthera_onca.PanOnc_flattened_line_3271                   22185  6 -    230217 tga----g----tt
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                              18459511  6 -  18783137 tga----g----tt
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               3970231  6 +   8748460 tga----g----tt
i Panthera_tigris.KE722367.1                             I 1 C 0
s Papio_anubis.CM001495.2                                   240793  6 - 183742232 GGA----G----TC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7257  6 +     21308 GGA----G----TC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288296  6 -  20919399 GGA----G----TC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19912  6 -     27687 GGA----G----TC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13048  6 +     16796 GGA----G----TC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19858  6 -     23640 GGA----G----TC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12840  6 +     78924 tgc----a----tt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_1921260                          23686  6 +     31479 TGA----A----TC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16044  6 -     24908 TGA----A----TC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37532  6 +     38305 ATG----G----TT
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244676  6 +  18517816 AGG----G----TC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29925  6 -     56120 TAA----G----TC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 2
s Piliocolobus_badius.k141_2495623                            6712  6 +      7560 GGG----G----TC
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62420  6 -     63152 GGG----G----TC
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            45019  6 +     45295 GGG----G----TC
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2697  6 +      5735 GGG----G----TC
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              814  6 +     22231 aga----c----tc
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62830  6 +    207309 GGA----G----TC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3926  6 -     25401 GGA----G----TC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29665  6 +     58159 GGA----G----TC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29941  6 +     63561 GGA----G----TC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29704  6 +     51148 GGA----G----TC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554673  6 -   4542175 GGA----G----TC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29688  6 +     51125 GGA----G----TC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6099  6 +     39866 GGA----G----TC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1184  6 -      9282 GGA----G----TC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40588  6 -     87950 GGA----G----TC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40981  6 -     88961 GGA----G----TC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5680  6 -     39403 GGA----G----TC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40634  6 +     87928 GGA----G----TC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5677  6 -     60166 GGA----G----TC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12613  6 -     67232 GGA----G----TC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40529  6 -     90634 GGA----G----TC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          41997  6 +     89403 GGA----G----TC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175531  6 - 189387572 AGA----G----TC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190349  6 -   9816681 AGA----G----TC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25175  6 +     69807 GGA----G----TC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42370  6 -     80239 gga----g----tc
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980541  6 +   4620579 TGA----G----TC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564008  6 -   2598838 TGA----G----TC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1644  6 -      7103 tga----g----tc
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2241  6 -     11706 tga----g----tc
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5977  6 -     30655 tga----g----tc
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32302  6 +     46564 tga----g----tc
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92573  6 -     98465 tga----g----tc
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6210  6 +     35169 tga----g----tc
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34124  4 +     52041 --A----G----TC
i Psammomys_obesus.NESX01036366.1                        C 0 I 2
s Pteronotus_parnellii.KE847780.1                            49853  6 -     66298 tga----g----tc
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2464  6 -     18639 tga----a----tt
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838820  6 -  28871421 tga----a----tc
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535385  6 -   4952924 tga----a----tc
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096832  6 +  38429054 tga----g----tt
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             24585  6 +     91421 GGA----G----TC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151078  6 -   7812017 GGA----G----TC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5455  6 +     72585 GGA----G----TC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020413  4 -  90668790 --A----G----AC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911486  6 +   3329780 tga----g----tc
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26395  6 +     27361 gga----g----tc
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119762  6 + 195417433 GGA----G----TC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234003  6 -   7961872 gga----g----tc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72803  6 -    116970 tga----g----tc
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1779  6 +     27962 ACA----G----TC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1787  6 +      6077 ACA----G----TC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1806  6 +      5971 ACG----G----TC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1860  6 +      5932 ACG----G----TC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                                44  6 -      4390 ACG----G----TC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389127  6 - 209938924 ACA----G----TC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1808  6 +      5979 ACG----G----TC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2174  6 -      4301 ACA----G----TC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236261  6 +   5703754 GGA----G----TC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5851  6 +     21866 GGA----G----TC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114018  6 +    313613 taa----g----tc
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22902  6 +     27374 GGA----G----TC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26421  6 +     58920 GGA----G----TC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12917  6 -     45317 GGA----G----TC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20575  6 -     42441 GGA----G----TC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23255  6 -     29113 GGA----G----TC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26324  6 -     48123 GGA----G----TC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46484  6 +     77746 AGA----A----TC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856322  6 -   1910179 tga----g----tc
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866291  6 +   3870691 TGT----G----TA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4462  6 -     97271 tga----g----at
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122525  6 +    196729 tga----g----tt
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Symphalangus_syndactylus.tarseq_199                       388539  6 +   1523678 GGA----G----TC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11625  6 +     22964 tgc----g----tc
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 639 10 +      5583 tga----cagtctc
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189352  6 +    199430 tga----a----tc
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103308  6 -    539355 TGA----A----TC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4881  6 +      6850 TGA----G----GC
i Tarsius_lariang.k141_1780720                           C 0 I 1
s Tarsius_wallacei.k141_226975                                4922  6 +     20590 TGA----G----GC
i Tarsius_wallacei.k141_226975                           C 0 I 1
s Theropithecus_gelada.CM009954.1                           350779  6 - 186847797 GGA----G----TC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22253  6 -     33621 TAA----G----TC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_31955                   17764 10 -     31044 tca----tagtctc
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_294                    477669  6 -    610378 tga----g----tc
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18466  6 +     26378 GGA----G----TC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31131  6 -     78344 GGA----G----TC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17787  6 +     25722 GGA----G----TC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26012  6 -     62838 GGA----G----TC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26129  6 +     46913 GGA----G----TC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6937  6 -     28527 GGA----G----TC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27951  6 -     64340 GGA----G----TC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25988  6 -     63452 GGA----G----TC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7431  6 +     22490 GGA----G----TC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          859  6 -      6147 GGA----G----TC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7834  6 -     13050 gga----g----tc
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253073  6 -   6242583 gga----g----tc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58823  6 +     59866 GGA----G----TC
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831869  6 -   4065304 TGA----G----AC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6121  6 -     70247 tga----g----tc
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 28
s Uropsilus_gracilis.UroGra_scaffold_7153                   105242  6 -    105689 TGA----G----TC
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179813  6 +   5085361 tga----g----tt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23183  6 -     30710 tga----g----tt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22090  6 -    147434 tga----g----tc
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102976  6 -    112863 tga----g----tt
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172063  6 -    224448 tga----g----tc
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26628  6 -     86975 tga----g----tt
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1310  6 +      2695 TGA----G----TC
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 35 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    42585 403 +    145209 I
e Echinops_telfairi.JH980293.1                            62851496 405 - 111700974 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_3531             134551 489 +    183988 I
e Miniopterus_natalensis.LDJU01000308.1                     495116 489 -   1897963 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Loxodonta_africana.GL010049.1                           39078096  0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3044 10 +     36723 T----CT--ATAT--GT--A
s Acinonyx_jubatus.LLWD01001279.1                           810575 11 +   1699592 gctacac--atat-------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413299 11 +  29979442 tctacac--atat-------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15958  1 -     61208 T-------------------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 2
s Allenopithecus_nigroviridis.k141_3755588                   45439 10 +     53615 t----ct--gtat--gt--a
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41379 10 +     44087 T----CT--GTAT--GT--A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14019 10 -     21945 T----CT--GTAT--GT--A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15695 10 +     32033 T----CT--GTAT--GT--A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70146 12 -     84148 T----CT--ATGTGAGT--A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42379 12 -     78289 T----CT--ATGTGAGT--A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41825 12 +     55831 T----CT--ATGTGAGT--A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40267 12 -     64179 T----CT--ATGTGAGT--A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21913 12 -     24835 T----CT--ATGTGAGT--A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38896 12 +     45454 T----CT--ATGTGAGT--A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44594 12 +     70886 T----CT--ATGTGAGT--A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6719 12 +     30854 T----CT--ATGTGAGT--A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30858 12 +     42133 T----CT--ATGTGAGT--A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174643 11 -    412891 tttacac--agat-------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48668 12 -     65372 T----CA--ATGTCAGT--A
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42415 12 +     43593 T----CA--ATGTCAGT--A
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670428 12 +   5030052 T----CA--ATGTCAGT--A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22070 12 -     23494 T----CA--ATGTCAGT--A
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7206 12 +      8415 T----CA--ATGTCAGT--A
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13994  1 -     32367 t-------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 2
s Arctocebus_calabarensis.k141_1364444                       18250 10 -     45910 T----CC--TCAT--AC--A
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2928 11 -     15198 tttacat--agat-------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272658 12 +  21539123 T----CT--ATGCGAGT--A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8825 12 +     48076 T----CT--ATGAGAGT--A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3962 12 -     28759 T----CT--ATGCGAGT--A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31515 12 +     44353 T----CT--ATGCGAGT--A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46886 12 -     71267 T----CT--ATGAGAGT--A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20945 12 -     33135 T----CT--ATGCGAGT--A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4135 10 +     11645 t----cc--acat--gt--g
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4141 10 -     19611 t----cc--acat--gt--g
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5849 12 +     28062 T----CT--GTCTGAGT--A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41143 12 -     91139 T----CT--GTCTGAGT--A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18669 12 +     95584 T----CT--GTCTGAGT--A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18582 12 +    119600 T----CT--GTCTGAGT--A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8059  9 +     18648 T----CT--GT----G-TGA
i Callibella_humilis.k141_1233062                        C 0 I 2
s Callimico_goeldii.k141_1609886                              7721  7 -     13885 T----CT--GT----G---A
i Callimico_goeldii.k141_1609886                         C 0 I 2
s Callithrix_geoffroyi.k119_473390                           16420  9 +     17162 T----CT--GT----G-TGA
i Callithrix_geoffroyi.k119_473390                       C 0 I 2
s Callithrix_jacchus.pat_scaffold_3                      165451375  9 + 189096842 T----CT--GT----G-TGA
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 2
s Callithrix_kuhlii.k119_404482                              17668  9 -     18408 T----CT--GT----G-TGA
i Callithrix_kuhlii.k119_404482                          C 0 I 2
s CanFam4.chr16                                           42503349 11 +  60362399 tctacag--atat-------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6985 11 -     23171 tctacag--atat-------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220328 11 +   9314153 TCTACAG--ATAT-------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613463 11 +  59632846 tctacag--atat-------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105044 11 -  63665305 tctacag--atat-------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268198  7 +    496798 ---------ACAT--GT--A
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               2998 11 +      5315 tttacat--agat-------
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993925  1 +  23392119 t-------------------
i Cavia_aperea.AVPZ01000300.1                            I 2 C 0
s Cavia_porcellus.DS562891.1                               4997367  1 +  23407841 t-------------------
i Cavia_porcellus.DS562891.1                             I 2 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60468  1 -     66877 T-------------------
i Cavia_tschudii.CavTsc_scaffold_23560                   I 2 C 0
s Cebuella_niveiventris.k141_592277                           2954  9 -     12580 T----CT--GT----G-TGA
i Cebuella_niveiventris.k141_592277                      C 0 I 2
s Cebuella_pygmaea.k141_145798                               40840  9 +     53515 T----CT--GT----G-TGA
i Cebuella_pygmaea.k141_145798                           C 0 I 2
s Cebus_albifrons.Contig27                                  369047 12 -  26074798 T----CT--GTGTGAGT--A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5936 12 -     34880 T----CT--GTGTGAGT--A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65031 12 -     89041 T----CT--GTGTGAGT--A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1370  7 -      1636 ---------ACAT--GT--A
i Cephalopachus_bancanus.k141_72622                      I 1 C 0
s Ceratotherium_simum.JH767749.1                          15490107 10 -  27778364 tctatac--aga--------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16940 10 +     27315 tctatac--aga--------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138618 10 -   4669795 T----CT--GTAT--GT--A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42358 10 +     47900 T----CT--GTAT--GT--A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42191 10 -     44860 T----CT--GTAT--GT--A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42174 10 -    148725 T----CT--GTAT--GT--A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25272 10 -     40656 T----CT--GTAT--GT--A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5241 10 +     20796 T----CT--GTAT--GT--A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9431 10 -     17524 T----CT--GTAT--GT--A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25153 10 -     34525 T----CT--GTAT--GT--A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9862 10 -     25376 T----CT--GTAT--GT--A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362461 10 -  39242232 T----CT--GTAT--GT--A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268169 10 +  21565898 T----CT--GTAT--GT--A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29630 10 -     45857 T----CT--GTAT--GT--A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25450 10 -     32606 T----CT--GTAT--GT--A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1603 10 +      8499 T----CT--GTAT--GT--A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23122 10 +     70610 T----CT--GTAT--GT--A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20047 10 +     36323 T----CT--GTAT--GT--A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10765  7 -     19938 t----gc--atat-------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 2 C 0
s Cheirogaleus_major.k141_666340                             28569 10 -     33796 T----CC--AGAT--GT--G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3099 10 -     15404 t----cc--agat--gt--a
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6935 10 -     32913 T----C----TGTGAGT--A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17348 10 -     40346 T----C----TGTGAGT--A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17603 10 +    216457 T----C----TGTGAGT--A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17396 10 +     39636 T----C----TGTGAGT--A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1787  7 +      5346 T----CT--GTGT-------
i Chiropotes_albinasus.k141_1946120                      C 0 I 1
s Chiropotes_israelita.k141_313004                           40489 12 -    112038 T----CT--GTCTGAGT--A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6061 12 +     34062 T----CT--GTCTGAGT--A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340944 10 +  18827391 T----CT--GTAT--GT--A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7489 10 -     44032 T----CT--GTAT--GT--A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302269 10 - 135778131 T----CT--GTAT--GT--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406704 10 -   2368649 T----CT--GTAT--GT--A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376580 10 - 200372422 t----ct--gtat--gt--a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                129 10 -     84244 t----ct--gtat--gt--a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805227  9 +  53390261 T----ATACAGAT-------
i Condylura_cristata.JH655891.1                          C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           698 11 -      8242 tttacac--agat-------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40261  1 -     83289 T-------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 29
s Cricetulus_griseus.LT883664.1                          213112442  1 - 224834208 t-------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 118
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1861 11 +     87169 gctacag--atat-------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642802  1 -   1526836 T-------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2953  1 +     50838 t-------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 48 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1550  1 +     36344 T-------------------
i Cuniculus_paca.CunPac_flattened_line_7025              I 2 C 0
s Dasypus_novemcinctus.JH564415.1                          2108096  7 -   2246927 t----gc--atat-------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290516 10 +  12879189 t----cc--acac--gt--a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862665 11 -  20541912 tctacac--ggat-------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662399 10 -   1390856 tctatac--aga--------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137184 10 -    198055 tctatac--aga--------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96429  1 -    115145 T-------------------
i Dinomys_branickii.DinBra_scaffold_10381                I 153 C 0
s Dipodomys_ordii.KN672350.1                              18948337  1 -  37912305 T-------------------
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3284  1 -     10735 T-------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7871  1 +     14636 T-------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             I 2 C 0
s Eidolon_helvum.AWHC01266696.1                               4232 11 +     19438 tctacac--aaaa-------
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105407  7 -  10337057 C----AT--ATAT-------
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28468  1 +    110024 C-------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 33
s Ellobius_talpinus.LOJH01026522.1                           10432  1 +     18970 C-------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 49
s Enhydra_lutris.KZ291758.1                               24913880 11 +  41312741 tctacac--atat-------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576299 11 +  14770903 tctacac--agac-------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039381 11 -   4378816 tctacac--agac-------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373315 11 +  39960074 tctacac--agac-------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410101 11 -    498745 tctacac--agac-------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260467 10 +  21539334 T----CT--GTAT--GT--A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12671 10 -     24895 t----cc--tcat--gt--a
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40383 10 -     70999 t----cc--tcat--gt--a
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84342 10 +    112731 t----cc--tcat--gt--a
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40915 10 +     68309 t----tc--tcat--gt--a
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51240 10 -     65740 T----CC--TCAT--GT--A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21870 10 -     75513 T----TC--TCAT--GT--A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46063 10 -     97555 T----TC--TCAT--GT--A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2790 10 +     30972 t----cc--tcat--gt--a
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40513 10 -     52037 t----cc--tcat--gt--a
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56914 10 -    111500 t----cc--tcat--gt--a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244481 11 - 206538554 gctacac--atag-------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114267 11 - 205367284 GCTACAC--ATAG-------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25371 11 -     30238 gctacac--atag-------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122260 10 -    137831 t----ct--acat--ac--a
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5800 10 +     22493 t----ct--acat--ac--a
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17842 10 -     32986 t----cc--acat--ac--a
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17006 10 +     18121 t----gt--acat--gt--a
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               3381 10 -      8343 T----CT--ATAT--GT--A
i Gorilla_beringei.k141_3358147                          C 0 I 21
s Gorilla_gorilla.LT578336.1                                 68853 10 +  33314783 t----ct--atat--gt--a
i Gorilla_gorilla.LT578336.1                             I 6 I 257
s Hapalemur_alaotrensis.k141_330369                          12600 10 -     40692 t----cc--tcat--gt--a
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34001 10 +     49394 t----cc--tcat--gt--a
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58870 10 -     66874 t----cc--tcat--gt--a
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7743 10 -     42923 t----cc--tcat--gt--a
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14743 10 -     53142 t----cc--tcat--gt--a
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28365 11 -    327341 gctacag--atat-------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925012  1 -  22651954 t-------------------
i Heterocephalus_glaber.JH602082.1                       I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548145 11 -   1711038 tccacac--agat-------
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47461 11 +     49977 tctacac--agat-------
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140385 10 -    630532 T----CT--ATAT--GT--A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66850 11 +     83186 GCTACGT--ATAT-------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69338  1 +    143317 T-------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 2 C 0
s Hylobates_agilis.k141_1155965                               3420 10 +     12352 T----CT--ATAT--GT--A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10603 10 +     55766 T----CT--ATAT--GT--A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050199 10 + 191637585 T----CT--ATAT--GT--A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799077 10 +  11177569 T----CT--ATAT--GT--A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384728  1 +   7955117 T-------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 2
s Indri_indri.k141_2415743                                     255 10 +     11955 T----CG--ATAT--GT--A
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41201 12 +    110728 T----CT--ATGTGAGT--A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    29012 11 -     49555 TCTACAC--AGAC-------
i Lasiurus_borealis.LasBor_scaffold_26245                C 0 I 59
s Lemur_catta.scaffold_24                                 14757391 10 +  30322482 t----cc--tcat--gt--a
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1874  8 -     13097 T----CT--GT----GT--A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1825  8 +      5940 T----CT--GT----GT--A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1456  8 -      5717 T----CT--GT----GT--A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8068  9 -     11567 T----CT--GT----GT-GA
i Leontopithecus_chrysomelas.k141_1327670                C 0 I 2
s Leontopithecus_rosalia.k141_349454                          9449  9 -     12945 T----CT--GT----GT-GA
i Leontopithecus_rosalia.k141_349454                     C 0 I 2
s Lepilemur_ankaranensis.k141_567626                          6925 10 +     29618 C----CT--GCAT--GG--A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6922 10 +     31569 C----CT--GCAT--GG--A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6932 10 +     24756 t----ct--gcat--gg--a
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6926 10 +     16388 C----CT--GCAT--GG--A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811229 11 -   3914936 tctacac--atat-------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     13684 10 +     24238 A----GT--Tttt--tt--a
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330571 10 -   1826925 T----CT--GTAT--GT--A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8039 10 +     19643 T----CC--GCAT--AC--A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041699 10 -   6120653 T----CC--GCAT--AC--A
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612618 11 +  59628241 tctacag--atat-------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42888 10 -     61512 T----CT--CTAT--GT--A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370549 10 -  60120075 T----CT--GTAT--GT--A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22804 10 +     30207 T----CT--GTAT--GT--A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19907 10 -     24934 T----CT--GTAT--GT--A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22756 10 +     30527 T----CT--GTAT--GT--A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33946 10 -     50087 T----CT--GTAT--GT--A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43717 10 +     51645 T----CT--GTAT--GT--A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412885 10 - 187317192 T----CT--GTAT--GT--A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397108 10 +  25927173 T----CT--GTAT--GT--A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46272 10 -     62418 T----CT--GTAT--AT--A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22927 10 +     24253 T----CT--GTAT--GT--A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42748 10 +     59329 T----CT--GTAT--GT--A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268681 10 +    668171 T----CT--GTAT--GT--A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19862 10 +     21031 T----CT--GTAT--GT--A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  459 10 +     17132 T----CT--GTAT--GT--A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221197 11 -    270270 tctacac--aaaa-------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319959 10 +  24302211 T----CT--GTAT--GT--A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354791 10 -    752769 T----CT--GTAT--GT--A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671481 11 -    737560 tctacag--agac-------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218774 11 +    317179 tctacag--agac-------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498937  1 +  40650429 T-------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                       148400 11 +    207569 tctacac--agat-------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23749 11 -     74585 tctacac--atat-------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46592  1 -    140813 T-------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 2 I 29
s Mesocricetus_auratus.KB708134.1                         17426967  1 +  29670104 t-------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 155
s Mico_argentatus.k141_582562                                 7831  9 +     17804 T----CT--GT----G-TGA
i Mico_argentatus.k141_582562                            C 0 I 2
s Mico_humeralifer.k141_1180625                               8615  9 -     12984 T----CT--GT----G-TGA
i Mico_humeralifer.k141_1180625                          C 0 I 2
s Mico_schneideri.k141_1877700                                     16566  9 -     26561 T----CT--GT----G-TGA
i Mico_schneideri.k141_1877700                                 C 0 I 2
s Microcebus_murinus.CM007674.1                           74982537 10 +  93316391 T----CC--AGAT--AT--A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182613 11 +    200668 tttacac--agat-------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360720  5 -   8254450 ------C--AGAT-------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39621  5 -     48117 ------C--AGAT-------
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19986 10 -     27822 T----CT--GTAT--GT--A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6239 11 +     27589 tctacac--atat-------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50328 10 -     62432 t----cc--agat--gt--a
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176797 11 +    366855 TCTATAC--AGAT-------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16120 11 -     63510 gctacag--atat-------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36643 11 +     47283 tctacac--agac-------
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    369  1 +      5579 T-------------------
i Mus_caroli.FMAL02030609.1                              C 0 I 29
s Mus_musculus.chr8                                       41682324  1 + 129401213 T-------------------
i Mus_musculus.chr8                                      C 0 I 29
s Mus_spretus.CM004101.1                                  39489936  1 + 130317789 T-------------------
i Mus_spretus.CM004101.1                                 C 0 I 72
s Mustela_putorius.JH418006.1                             14352693 11 +  14710649 tctacac--atat-------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790687 11 +  10118263 tctacac--agac-------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385049 11 +   6019432 tctacac--agac-------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380869 11 +   4330536 tctacac--agac-------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3428 11 +      3929 TCTACAC--AGAC-------
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117531  9 +    130748 tgt--gc--atat-------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26567 10 +     34575 T----CT--GTAT--GT--A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466626 11 -  31847680 tctacac--atgt-------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125591 11 -    149072 TCTACAC--AGAT-------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51309 10 -    132029 T----CT--ATAT--GT--A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7404 10 -     16345 T----CT--ATAT--GT--A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13289 10 +     22201 T----CT--ATAT--GT--A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411573 10 -  22158432 T----CT--ATAT--GT--A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23687 10 -     54323 T----CT--ATAT--GT--A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196218 11 +   9404916 tctacac--atat-------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634007 10 + 196305487 T----CC--ACAT--AC--A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              765 10 -      3937 T----CC--ACAT--AC--A
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562257 10 - 199412804 T----CC--ACAT--AC--A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11045303  1 -  11899542 t-------------------
i Octodon_degus.JH651603.1                               I 50 C 0
s Odobenus_rosmarus.KB229312.1                             1449436 11 +   2017862 tctatac--atat-------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90196  1 -    140218 C-------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 36
s Onychomys_torridus.OnyTor_scaffold_2487                   105036  1 +    107918 T-------------------
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 I 29
s Orycteropus_afer.OryAfe_flattened_line_171931              11326  7 -     14239 t----ac--gtat-------
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107100571 10 - 174332312 N----NN--NNNN--NN--N
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37258 11 +    559221 tctacac--atat-------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37381 10 -     51505 t----cc--acat--ac--a
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350395 10 +   1103335 T----CC--ACAT--AC--A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470397 10 - 189151597 T----CT--ATAT--GT--A
i Pan_troglodytes.CM009242.2                             I 44 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22191 11 -    230217 gctacac--atat-------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459517 11 -  18783137 gctacac--atat-------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970237 11 +   8748460 gctacac--atat-------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240799 10 - 183742232 T----CT--GTAT--GT--A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7263 10 +     21308 T----CT--GTAT--GT--A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288302 10 -  20919399 T----CT--GTAT--GT--A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19918 10 -     27687 T----CT--GTAT--GT--A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13054 10 +     16796 T----CT--GTAT--GT--A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19864 10 -     23640 T----CT--GTAT--GT--A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12846 11 +     78924 gctacac--ataa-------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23692 10 +     31479 T----CC--ACAT--AC--A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16050 10 -     24908 T----CC--ACAT--AC--A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37538  1 +     38305 T-------------------
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244682  1 +  18517816 T-------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 29
s Petromus_typicus.PetTyp_scaffold_17301                     29933  1 -     56120 G-------------------
i Petromus_typicus.PetTyp_scaffold_17301                 I 2 C 0
s Piliocolobus_badius.k141_2495623                            6718 10 +      7560 T----CT--GTAT--GT--A
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62426 10 -     63152 T----CT--GTAT--GT--A
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            45025 10 +     45295 T----CT--GTAT--GT--A
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2703 10 +      5735 T----CT--GTAT--GT--A
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              820 11 +     22231 tctacac--agac-------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62836 12 +    207309 T----CT--GTGTGAGT--A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3932 12 -     25401 T----CT--GTGTGAGT--A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29671 12 +     58159 T----CT--GTGTGAGT--A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29947 12 +     63561 T----CT--GTGTGAGT--A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29710 12 +     51148 T----CT--GTGTGAGT--A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554679 12 -   4542175 T----CT--GTGTGAGT--A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29694 12 +     51125 T----CT--GTGTGAGT--A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6105 10 +     39866 T----C----TGTGAGT--A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1190 10 -      9282 T----C----TGTGAGT--A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40594 10 -     87950 T----C----TGTGAGT--A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40987 10 -     88961 T----C----TGTGAGT--A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5686 10 -     39403 T----C----TGTGAGT--A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40640  8 +     87928 T----C------TGAGT--A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5683 10 -     60166 T----C----TGTGAGT--A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12619 10 -     67232 T----C----TGTGAGT--A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40535 10 -     90634 T----C----TGTGAGT--A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42003 10 +     89403 T----C----TGTGAGT--A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175537 10 - 189387572 T----CT--ATAT--GT--A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190355 10 -   9816681 T----CT--ATAT--GT--A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25181 10 +     69807 T----CT--GTAT--GT--A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42376 10 -     80239 t----ct--gtat--gt--a
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980547 10 +   4620579 T----CC--TCAT--GT--A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564014 10 -   2598838 T----CC--ACAT--GT--G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1650 10 -      7103 t----cc--acat--gt--g
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2247 10 -     11706 t----cc--acat--gt--g
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5983 10 -     30655 t----cc--acat--gt--g
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32308 10 +     46564 t----cc--acat--gt--g
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92579 10 -     98465 t----cc--acat--gt--g
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6216 10 +     35169 t----cc--acat--gt--g
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34130  1 +     52041 T-------------------
i Psammomys_obesus.NESX01036366.1                        I 2 I 29
s Pteronotus_parnellii.KE847780.1                            49859 11 -     66298 tctacac--agat-------
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2470 11 -     18639 tctacac--atat-------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838826 11 -  28871421 tctacac--aaaa-------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535391 11 -   4952924 tctacac--aaaa-------
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096838 11 +  38429054 gctacac--atat-------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24591 10 +     91421 T----CT--GTAT--GT--A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151084 10 -   7812017 T----CT--GTAT--GT--A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5461 10 +     72585 T----CT--GTAT--GT--A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020417  1 -  90668790 T-------------------
i Rattus_norvegicus.chr16                                C 0 I 29
s Rhinolophus_sinicus.LVEH01000134.1                       2911492 11 +   3329780 tctacac--acat-------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26401 10 +     27361 t----ct--gtat--gt--a
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119768 10 + 195417433 T----CT--GTAT--GT--A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234009 10 -   7961872 t----ct--gtat--gt--a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72809 11 -    116970 tctacac--aaag-------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1785  8 +     27962 T----CT--GT----GT--A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1793  8 +      6077 T----CT--GT----GT--A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1812  8 +      5971 T----CT--GT----GT--A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1866  8 +      5932 T----CT--GT----GT--A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                                50  8 -      4390 T----CT--GT----GT--A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389133  8 - 209938924 T----CT--GT----GT--A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1814  8 +      5979 T----CT--GT----GT--A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2180  8 -      4301 T----CT--GT----GT--A
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236267 12 +   5703754 T----CT--GTGTGAGT--A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5857 12 +     21866 T----CT--GTGTGAGT--A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114024  9 +    313613 t----gcacagat-------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22908 10 +     27374 T----CT--GTAT--GT--A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26427 10 +     58920 T----CT--GTAT--GT--A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12923 10 -     45317 T----CT--GTAT--GT--A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20581 10 -     42441 T----CT--GTAT--GT--A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23261 10 -     29113 T----CT--GTAT--GT--A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26330 10 -     48123 T----CT--GTAT--GT--A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46490  1 +     77746 T-------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 49
s Solenodon_paradoxus.SolPar_flattened_line_126            1856328  7 -   1910179 t----gc--agat-------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866297  1 +   3870691 T-------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525              4468 11 -     97271 tttacac--atat-------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122531 11 +    196729 gctacag--atat-------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388545 10 +   1523678 T----CT--ATAT--GT--A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11631 11 +     22964 tctacac--agat-------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 649  9 +      5583 tgt--gc--atat-------
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189358 11 +    199430 tctacac--agat-------
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103314 11 -    539355 TCTACAC--AGAT-------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4888  7 +      6850 ---------ACAT--GT--A
i Tarsius_lariang.k141_1780720                           I 1 C 0
s Tarsius_wallacei.k141_226975                                4929  7 +     20590 ---------ACAT--GT--A
i Tarsius_wallacei.k141_226975                           I 1 C 0
s Theropithecus_gelada.CM009954.1                           350785 10 - 186847797 T----CT--GTAT--GT--A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22261  1 -     33621 T-------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17776  7 -     31044 t----gc--atat-------
i Tolypeutes_matacus.TolMat_scaffold_31955               I 2 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477675 11 -    610378 tctacat--agat-------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18472 10 +     26378 T----CT--GTAT--GT--A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31137 10 -     78344 T----CT--GTAT--GT--A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17793 10 +     25722 T----CT--GTAT--GT--A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26018 10 -     62838 T----CT--GTAT--GT--A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26135 10 +     46913 T----CT--GTAT--GT--A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6943 10 -     28527 T----CT--GTAT--GT--A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27957 10 -     64340 T----CT--GTAT--GT--A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          25994 10 -     63452 T----CT--GTAT--GT--A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7437 10 +     22490 T----CT--GTAT--GT--A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          865 10 -      6147 T----CT--GTAT--GT--A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7840 10 -     13050 t----ct--gtat--gt--a
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253079 10 -   6242583 t----ct--gtat--gt--a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58829 10 +     59866 T----CT--GTAT--GT--A
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831875 10 -   4065304 G----CT--ATAT--GT--A
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_394                       6155 10 -     70247 c----ct--atat--gt--a
i Tupaia_tana.TupTan_flattened_line_394                  I 28 I 1
s Uropsilus_gracilis.UroGra_scaffold_7153                   105248  9 -    105689 T----ACATAGAT-------
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179819 11 +   5085361 tctacac--atat-------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23189 10 -     30710 t----cc--acat--gt--a
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22096 10 -    147434 t----cc--acat--gt--a
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102982 11 -    112863 tctacac--atat-------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172069  1 -    224448 t-------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 2
s Zalophus_californianus.ZalCal_flattened_line_17732         26634 11 -     86975 tctacac--atat-------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1316  1 +      2695 T-------------------
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 2
e Microgale_talazaci.MicTal_scaffold_6613                    42585 403 +    145209 I
e Echinops_telfairi.JH980293.1                            62851496 405 - 111700974 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Loxodonta_africana.GL010049.1                           39078096  0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1237143  1 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3054 21 +     36723 CTT-TTG-A----GTCTAT----GGTCC----ATT
s Acinonyx_jubatus.LLWD01001279.1                           810586 20 +   1699592 ttt-tgg-a----gtctag----agttt----gt-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413310 21 +  29979442 ttt-tag-g----gtctag----agttt----atg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 2
s Allactaga_bullata.AllBul_scaffold_20030                    15961  3 -     61208 --------------------------------ACA
i Allactaga_bullata.AllBul_scaffold_20030                I 2 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45449 21 +     53615 ctt-ttg-a----gtctat----ggtcc----att
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41389 21 +     44087 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14029 21 -     21945 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15705 21 +     32033 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70158 21 -     84148 CTT-TTG-A----GTCTAT----CGTCC----ATA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42391 21 -     78289 CTT-TTG-A----GTCTAT----CGTCC----ATA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41837 21 +     55831 CTT-TTG-A----GTCTAT----CGTCC----ATA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40279 21 -     64179 CTT-TTG-A----ATCTAT----CATCC----ATA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21925 21 -     24835 CTT-TTG-A----GTCTAT----CGTCC----ATA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38908 21 +     45454 CTT-TTG-A----ATCTAT----CGTCC----ATA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44606 21 +     70886 CTT-TTG-A----GTCTAT----CGTCC----ATA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6731 21 +     30854 CTT-TTG-A----ATCTAT----CATCC----ATA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30870 21 +     42133 CTT-TTG-A----ATCTAT----CATCC----ATA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174654 21 -    412891 ttt-tgg-a----gtctat----agttc----atc
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48680 21 -     65372 CTT-TTG-A----GTCTAT----GGTCT----GTA
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42427 21 +     43593 CTT-TTG-A----GTCTAT----GGTCT----GTA
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670440 21 +   5030052 CTT-TTG-A----GTCTAT----GGTCT----GTA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22082 21 -     23494 CTT-TTG-A----GTCTAT----GGTCT----GTA
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7218 21 +      8415 CTT-TTG-A----GTCTAT----GGTCT----GTA
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      13997  3 -     32367 --------------------------------tca
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 2 C 0
s Arctocebus_calabarensis.k141_1364444                       18260 21 -     45910 TTT-TGG-A----GTCAAT----GATTT----ATA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2939 21 -     15198 ttt-tgg-a----gtctag----agttc----atc
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272670 21 +  21539123 CTT-TTG-A----GTCTAT----GGTCC----ATA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8837 21 +     48076 CTT-TTG-A----GTCTAT----GGTCC----ATA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3974 21 -     28759 CTT-TTG-A----GTCTAT----GGTCC----ATA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31527 21 +     44353 CTT-TTG-A----GTCTAT----GGTCC----ATA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46898 21 -     71267 CTT-TTG-A----GTCTAT----GGTCC----ATA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20957 21 -     33135 CTT-TTG-A----GTCTAT----GGTCC----ATA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4145 21 +     11645 ttt-tgg-a----gactat----ggttt----cta
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4151 21 -     19611 ttt-tgg-a----gactat----ggttt----cta
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5861 21 +     28062 CTT-TTG-A----GTCTAT----GGTCC----GTA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41155 21 -     91139 CTT-TTG-A----GTCTAT----GGTCC----ATA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18681 21 +     95584 CTT-TTG-A----GTCTAT----GGTCC----GTA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18594 21 +    119600 CTT-TTG-A----GTCTAT----GGTCC----GTA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8070 21 +     18648 CTT-TGG-A----GTCTGT----GGTCC----ATG
i Callibella_humilis.k141_1233062                        I 2 C 0
s Callimico_goeldii.k141_1609886                              7730 21 -     13885 CTT-TTG-A----GTCTGT----GGTCC----ATA
i Callimico_goeldii.k141_1609886                         I 2 C 0
s Callithrix_geoffroyi.k119_473390                           16431 21 +     17162 CTT-GTG-A----GTCTGT----GGTCC----ATG
i Callithrix_geoffroyi.k119_473390                       I 2 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451386 21 + 189096842 CTT-TTG-A----GTCTGT----GGTCC----ATG
i Callithrix_jacchus.pat_scaffold_3                      I 2 C 0
s Callithrix_kuhlii.k119_404482                              17679 21 -     18408 CTT-TTG-A----GTCTGT----GGTCC----ATG
i Callithrix_kuhlii.k119_404482                          I 2 C 0
s CanFam4.chr16                                           42503360 21 +  60362399 ttt-tgg-a----gtctag----agttt----gtg
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     6996 21 -     23171 ttt-tgg-a----gtctag----agttt----gtg
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220339 21 +   9314153 TTT-TGG-A----GTCTAG----AGTTT----GTG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613474 21 +  59632846 ttt-tgg-a----gtctag----agttt----gtg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105055 21 -  63665305 ttt-tgg-a----gtctag----agttt----gtg
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268205 25 +    496798 TTT-TGG-C----ATCTATTTGGGGTAG----ATG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3009 21 +      5315 ttt-tgg-a----gtctat----agttc----atc
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993926  3 +  23392119 --------------------------------aca
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997368  3 +  23407841 --------------------------------aca
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60469  3 -     66877 --------------------------------ACA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2965 19 -     12580 CTT-TGG-A----GTC--T----GGTCC----ATG
i Cebuella_niveiventris.k141_592277                      I 2 C 0
s Cebuella_pygmaea.k141_145798                               40851 19 +     53515 CTT-TGG-A----GTC--T----GGTCC----ATG
i Cebuella_pygmaea.k141_145798                           I 2 C 0
s Cebus_albifrons.Contig27                                  369059 21 -  26074798 CTT-TTG-A----GTCTGT----GGTCC----ATA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5948 21 -     34880 CTT-TTG-A----GTCTGT----GGTCC----ATA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65043 21 -     89041 CTT-TTG-A----GTCTGT----GGTCC----ATA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1377 25 -      1636 TTT-TGG-C----ATCTATTTGGGGTAG----ATG
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490117 21 -  27778364 ttt-tag-t----gtctat----agttt----ata
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16950 21 +     27315 ttt-tag-t----gtctat----agttt----ata
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138628 21 -   4669795 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42368 21 +     47900 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42201 21 -     44860 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42184 21 -    148725 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25282 21 -     40656 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5251 21 +     20796 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9441 21 -     17524 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25163 21 -     34525 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9872 21 -     25376 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362471 21 -  39242232 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268179 21 +  21565898 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29640 21 -     45857 CTT-TTG-A----GTCTAT----GGTTC----ATT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25460 21 -     32606 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1613 21 +      8499 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23132 21 +     70610 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20057 21 +     36323 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10772 20 -     19938 t-t-tgg-a----gtctac----agttt----ata
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28579 21 -     33796 TTT-TGG-A----GACTAT----GGTTT----CTA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3109 21 -     15404 ttt-tgg-a----gactat----ggttt----cta
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6945 21 -     32913 GTT-TTG-A----GTCTAC----GTTCC----AGA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17358 21 -     40346 CTT-TTG-A----GTCTAC----GGTCC----AGA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17613 21 +    216457 CTT-TTG-A----GTCTAC----GGTCC----AGA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17406 21 +     39636 CTT-TTG-A----GTCTAC----GGTCC----AGA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1795 21 +      5346 CTT-TTC-A----GTCTAT----GGTCC----ATA
i Chiropotes_albinasus.k141_1946120                      I 1 C 0
s Chiropotes_israelita.k141_313004                           40501 21 -    112038 CTT-TTG-A----GTCTAT----GGTCT----GTA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6073 21 +     34062 CTT-TTG-A----GTCTAT----GGTCC----GTA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340954 21 +  18827391 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7499 21 -     44032 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302279 21 - 135778131 CTT-CTG-A----GTCTAT----GGTCC----ATT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406714 21 -   2368649 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376590 21 - 200372422 ctt-ttg-a----gtctat----ggtcc----att
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                139 21 -     84244 ctt-ttg-a----gtctat----ggtcc----att
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805238  5 +  53390261 --------------------------TA----ACA
i Condylura_cristata.JH655891.1                          I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           709 21 -      8242 ttt-agg-a----atctaa----agctt----atc
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40291  3 -     83289 --------------------------------ATG
i Cricetomys_gambianus.CriGam_scaffold_14425             I 29 C 0
s Cricetulus_griseus.LT883664.1                          213112561  3 - 224834208 --------------------------------ata
i Cricetulus_griseus.LT883664.1                          I 118 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1872 20 +     87169 ttt-tgg-a----gtctag----agttt----gt-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 4
s Ctenodactylus_gundi.CteGun_scaffold_65                    642803  3 -   1526836 --------------------------------ACA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2954  3 +     50838 --------------------------------cca
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1551  3 +     36344 --------------------------------ACA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108103 20 -   2246927 t-t-tgg-a----gtctac----agttt----aca
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290526 21 +  12879189 ttc-tgg-a----gtctat----ggttt----ata
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862676 21 -  20541912 ttt-tgg-a----gtctat----agttc----atc
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662409 22 -   1390856 tttttgg-t----gtctac----agttt----ata
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137194 21 -    198055 ttt-tag-t----gtctat----agttt----ata
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96430  3 -    115145 --------------------------------ACA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948338  3 -  37912305 --------------------------------ATA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3285  3 -     10735 --------------------------------ATG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7872  3 +     14636 --------------------------------ACG
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4243 21 +     19438 ttt-tgg-a----atctac----aattt----atc
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105414 20 -  10337057 T-T-TAG-G----GTCTAC----CATTT----ATA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28502  3 +    110024 --------------------------------atg
i Ellobius_lutescens.LOEQ01008920.1                      I 33 C 0
s Ellobius_talpinus.LOJH01026522.1                           10482  3 +     18970 --------------------------------gtg
i Ellobius_talpinus.LOJH01026522.1                       I 49 C 0
s Enhydra_lutris.KZ291758.1                               24913891 21 +  41312741 ttt-tgg-g----gtctag----agttt----atg
i Enhydra_lutris.KZ291758.1                              C 0 I 2
s Eptesicus_fuscus.JH977646.1                             12576310 21 +  14770903 ttt-tgg-a----gtctgc----agttt----atc
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039392 21 -   4378816 ttt-tgg-g----gtctat----agttt----ata
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373326 21 +  39960074 ttt-tgg-g----gtctac----agttt----ata
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410112 21 -    498745 ttt-tgg-g----gtctac----agttt----ata
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260477 21 +  21539334 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12681 21 -     24895 ttt-tgg-a----gactat----ggttt----cta
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40393 21 -     70999 ttt-tgg-a----gactat----ggttt----cta
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84352 21 +    112731 ttt-tgg-a----gactat----ggttt----cta
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40925 21 +     68309 ttt-tgg-a----gactat----ggttt----cta
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51250 21 -     65740 TTT-TGG-A----GACTAT----GGTTT----CTA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21880 21 -     75513 TTT-CGG-A----GACTAT----GGTTT----CTA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46073 21 -     97555 TTT-TGG-A----GACTAT----GGTTT----CTA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2800 21 +     30972 ttt-tgg-a----gactat----ggttt----cta
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40523 21 -     52037 ttt-tgg-a----gactat----ggttt----cta
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56924 21 -    111500 ttt-tgg-a----gactat----ggttt----cta
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244492 20 - 206538554 ttt-tgg-a----gtctag----agttt----gt-
i Felis_catus.CM001381.2                                 C 0 I 4
s Felis_catus_fca126.CM031415.1                          185114278 20 - 205367284 TTT-TGG-A----GTCTAg----agttt----gt-
i Felis_catus_fca126.CM031415.1                          C 0 I 4
s Felis_nigripes.FelNig_flattened_line_31944                 25382 20 -     30238 ttt-tgg-a----gtctag----agttt----gt-
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 4
s Galago_moholi.ctg3793                                     122270 21 -    137831 ttt-tgg-a----gtcaat----aattt----ata
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5810 21 +     22493 ttt-tgg-a----gtcaat----gattt----ata
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17852 21 -     32986 ttt-tag-a----gtcaat----gaatt----ata
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17016 21 +     18121 ttt-tgg-a----gtccat----ggttt----ata
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_668773                                 344 21 -      1303 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Gorilla_beringei.k141_668773                           I 190 I 87
s Gorilla_gorilla.LT578341.1                                252402 21 - 186649187 ctt-ttg-a----gtctat----ggtcc----att
i Gorilla_gorilla.LT578341.1                             I 10 C 0
s Hapalemur_alaotrensis.k141_330369                          12610 20 -     40692 -tt-tgg-a----gagtat----ggttt----cta
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34011 20 +     49394 -tt-tgg-a----gagtat----ggttt----cta
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58880 20 -     66874 -tt-tgg-a----gagtat----ggttt----cta
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7753 20 -     42923 -tt-tgg-a----gagtat----ggttt----cta
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14753 20 -     53142 -tt-tgg-a----gagtat----ggttt----cta
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28376 20 -    327341 ttt-tgg-a----gtccag----agttt----gt-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 4
s Heterocephalus_glaber.JH602082.1                         1925013  3 -  22651954 --------------------------------aca
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548156 21 -   1711038 ttt-cgg-a----gtctac----agttt----atc
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47472 21 +     49977 ttt-tgg-a----gtctac----agttt----atc
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140395 21 -    630532 CTT-TTG-C----TTCTAT----GGTCC----ATT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66861 20 +     83186 TTT-TGG-A----GTCTGG----AATTT----GT-
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 2
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69339  3 +    143317 --------------------------------ACA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3430 21 +     12352 CTT-TTG-C----TTCTAT----GGTCC----ATT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10613 21 +     55766 CTT-TTG-C----TTCTAT----GGTCC----ATT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050209 21 + 191637585 GTT-TTG-C----TTCTAT----GGTCC----ATT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799087 21 +  11177569 GTT-TTG-C----TTCTAT----GGTCC----ATT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384731  3 +   7955117 --------------------------------GCA
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Indri_indri.k141_2415743                                     265 21 +     11955 TTT-TGG-A----GACTAT----GGTTT----CTA
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237144  3 +   9596543 --------------------------------ATA
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Lagothrix_lagothricha.k141_246028                          41213 21 +    110728 CTT-TTG-A----GTCTAT----GGTCC----ATA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59784 21 -     65777 ttt-tgg-a----gtttac----agttc----atc
i Lasiurus_borealis.LasBor_scaffold_16567                I 15 C 0
s Lemur_catta.scaffold_24                                 14757401 20 +  30322482 -tt-tgg-a----gactat----ggttt----cta
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1882 21 -     13097 CTT-TTG-A----GTCTAT----GGTCC----ATA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1833 21 +      5940 CTT-TTG-A----GTCTAT----GGTCC----ATA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1464 21 -      5717 CTT-TTG-A----GTCTAT----GGTCC----ATA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8079 21 -     11567 CTT-TTG-A----GTCTGT----GGTCC----ATA
i Leontopithecus_chrysomelas.k141_1327670                I 2 C 0
s Leontopithecus_rosalia.k141_349454                          9460 21 -     12945 CTT-TTG-A----GTCTGT----GGTCC----ATA
i Leontopithecus_rosalia.k141_349454                     I 2 C 0
s Lepilemur_ankaranensis.k141_567626                          6935 21 +     29618 TTT-TGG-A----GACTAT----GGTTT----CTA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6932 21 +     31569 TTT-TGG-A----GACTAT----GGTTT----CTA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6942 21 +     24756 ttt-tgg-a----gactat----ggttt----cta
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6936 21 +     16388 TTT-TGG-A----GACTAT----GGTTT----CTA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811240 22 -   3914936 ttt-tgggg----gtctag----agttt----atg
i Leptonychotes_weddellii.KB714746.1                     C 0 I 2
s Lepus_americanus.LepAme_scaffold_56121                     13694 25 +     24238 att-ttt-aaaaaatattt----atttt----att
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330581 21 -   1826925 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8049 21 +     19643 TTT-TGG-A----GTCAAT----GATTT----ATA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041709 21 -   6120653 TTT-TGG-A----GTCAAT----GATTT----ATA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078096  2 +  43346337 ---------------------------------ct
i Loxodonta_africana.GL010049.1                          C 0 I 148
s Lycaon_pictus.CM007581.1                                41612629 21 +  59628241 ttt-tgg-a----gtctag----agttt----gtg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42898 21 -     61512 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370559 21 -  60120075 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22814 21 +     30207 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19917 21 -     24934 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22766 21 +     30527 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33956 21 -     50087 CTT-TTG-A----GTGTAT----GGTCC----ATT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43727 21 +     51645 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412895 21 - 187317192 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397118 21 +  25927173 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46282 21 -     62418 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22937 21 +     24253 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42758 21 +     59329 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268691 21 +    668171 CTT-TTG-A----GTGTAT----GGTCC----ATT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19872 21 +     21031 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  469 21 +     17132 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221208 21 -    270270 ttt-tgg-a----gtctac----aattt----atc
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319969 21 +  24302211 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354801 21 -    752769 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671492 21 -    737560 ttt-tgg-a----gtctgt----agttt----gtg
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218785 21 +    317179 ttt-tgg-a----gtctgt----agttt----gta
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498940  3 +  40650429 --------------------------------GCA
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148411 21 +    207569 ttt-tgg-a----ctctac----agttt----atc
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23760 21 -     74585 ttt-tgg-g----gtccag----agttt----atg
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 2
s Meriones_unguiculatus.MerUng_scaffold_7390                 46622  3 -    140813 --------------------------------ACA
i Meriones_unguiculatus.MerUng_scaffold_7390             I 29 C 0
s Mesocricetus_auratus.KB708134.1                         17427123  3 +  29670104 --------------------------------ata
i Mesocricetus_auratus.KB708134.1                        I 155 C 0
s Mico_argentatus.k141_582562                                 7842 21 +     17804 CTT-TGG-A----GTCTGT----GGTCC----ATG
i Mico_argentatus.k141_582562                            I 2 C 0
s Mico_humeralifer.k141_1180625                               8626 21 -     12984 CTT-TGG-A----GTCTGT----GGTCC----ATG
i Mico_humeralifer.k141_1180625                          I 2 C 0
s Mico_schneideri.k141_1877700                                     16577 21 -     26561 CTT-TGG-A----GTCTGT----GGTCC----ATG
i Mico_schneideri.k141_1877700                                 I 2 C 0
s Microcebus_murinus.CM007674.1                           74982547 21 +  93316391 TTT-TGG-A----GACTAT----GATTT----CTA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182624 21 +    200668 ttt-tgg-t----gtctac----agctc----atc
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360725 21 -   8254450 ttt-tgg-a----gtctac----agttt----atc
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39626 21 -     48117 TTT-TGG-A----GTCTAC----AGTTT----ATC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         19996 21 -     27822 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6250 22 +     27589 ttt-ggggg----gtctag----agttt----atg
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 2
s Mirza_zaza.k141_766280                                     50338 21 -     62432 ttt-tgg-a----gactat----gattt----cta
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176808 21 +    366855 TTT-TGG-A----GTCTAT----AGTTT----ATC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16131 18 -     63510 ttt-tgg-a----gtccag----agttt-------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 2
s Murina_feae.MurFea_scaffold_17764                          36654 21 +     47283 ttt-tgg-a----gtctac----agttt----att
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    399  3 +      5579 --------------------------------ata
i Mus_caroli.FMAL02030609.1                              I 29 C 0
s Mus_musculus.chr8                                       41682354  3 + 129401213 --------------------------------ata
i Mus_musculus.chr8                                      I 29 C 0
s Mustela_putorius.JH418006.1                             14352704 21 +  14710649 ttt-tgg-g----gtctag----agttt----atg
i Mustela_putorius.JH418006.1                            C 0 I 2
s Myotis_brandtii.KE162005.1                               9790698 21 +  10118263 ttt-tgg-a----atctac----agttt----atc
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385060 21 +   6019432 ttt-tgg-a----atctac----agttt----atc
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380880 21 +   4330536 ttt-tgg-a----atctac----agttt----atc
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3439 21 +      3929 TTT-TAG-A----ATCTAC----Agttt----atc
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117540 20 +    130748 t-t-ttg-c----atcttt----agttt----ata
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26577 21 +     34575 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466637 22 -  31847680 ttt-tgggg----gtctag----agttt----atg
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_7894                   125602 21 -    149072 TTT-TGG-A----GTCTAT----AGTTG----ATC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51319 21 -    132029 CTT-TTG-C----TTCTAT----GGTCC----ATT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7414 21 -     16345 CTT-TTG-C----TTCTAT----GGTCC----ATT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13299 21 +     22201 CTT-TTG-C----TTCTAT----GGTCC----ATT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411583 21 -  22158432 CTT-TTG-C----TTCTAT----GGTCC----ATT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23697 21 -     54323 CTT-TTG-C----TTCTAT----GGTCC----ATT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196229 21 +   9404916 ttt-tgg-a----gtctag----agttt----gtg
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634017 21 + 196305487 TTT-TGG-A----GTCAAT----GATTT----ATA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              775 21 -      3937 TTT-TGG-A----GTCAAT----GATTT----ATA
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562267 21 - 199412804 TTT-TGG-A----TTCAAT----GATTT----ATA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11045304  3 -  11899542 --------------------------------cta
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449447 22 +   2017862 ttt-tgggg----gtctag----agttt----atg
i Odobenus_rosmarus.KB229312.1                           C 0 I 2
s Onychomys_torridus.OnyTor_scaffold_2487                   105066  3 +    107918 --------------------------------ATA
i Onychomys_torridus.OnyTor_scaffold_2487                I 29 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11333 20 -     14239 t-t-tgg-g----gtctct----aggtt----aca
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107100581 25 - 174332312 NNN-NNN-NNNNNNNNNNN----NNNNN----NNN
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37269 21 +    559221 ttt-tga-a----gtctag----agttt----gtg
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37391 21 -     51505 ttt-tgg-a----gtcaat----gattt----ata
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350405 21 +   1103335 TTT-TGG-A----GTCAAT----GATTT----ATA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470407 21 - 189151597 CTT-TTG-A----GTCTAT----GATCC----ATT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22202 24 -    230217 ttt-tgg-a----gtctag----agtttgtctgt-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459528 24 -  18783137 ttt-tgg-a----gtctag----agtttgtctgt-
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970248 24 +   8748460 ttt-tgg-a----gtctag----agtttgtctgt-
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240809 21 - 183742232 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7273 21 +     21308 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288312 21 -  20919399 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19928 21 -     27687 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13064 21 +     16796 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19874 21 -     23640 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12857 20 +     78924 ttt-tgg-a----gtctag----agttt----gt-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23702 21 +     31479 TTT-TGG-A----GTCAAT----GATTT----ATA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16060 21 -     24908 TTT-TGG-A----GTCAAT----GATTT----ATA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37539  3 +     38305 --------------------------------ATA
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244712  2 +  18517816 ---------------------------------ta
i Peromyscus_maniculatus.KI615324.1                      I 29 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29934  3 -     56120 --------------------------------ACA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6728 21 +      7560 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62436 21 -     63152 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            45035 21 +     45295 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2713 21 +      5735 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              831 21 +     22231 ttt-tgg-a----gtctac----agttt----atc
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62848 21 +    207309 CGT-TTG-A----GTCCAT----GGTCC----GTA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3944 21 -     25401 CTT-TTG-A----GTTCAT----GGTCC----GTA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29683 21 +     58159 CGT-TTG-A----GTCCAT----GGTCC----GTA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29959 21 +     63561 CGT-TTG-A----GTCCAT----GGTCC----GTA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29722 21 +     51148 CGT-TTG-A----GTCCAT----GGTCC----GTA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554691 21 -   4542175 CTT-TTG-A----GTTCAT----GGTCC----GTA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29706 21 +     51125 CGT-TTG-A----GTCCAT----GGTCC----GTA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6115 21 +     39866 CTT-TTG-A----GTCTAC----GGTCC----AGA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1200 21 -      9282 CTT-TTG-A----GTCTAC----GGTCC----AGA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40604 21 -     87950 CTT-TTG-A----GTCTAC----GGTCC----AGA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     40997 21 -     88961 CTT-TTG-A----GTCTAC----GGTCC----AGA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5696 21 -     39403 CTT-TTG-A----GTCTAC----GGTCC----AGA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40648 21 +     87928 CTT-TTG-A----GTCTAC----GGTCC----AGA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5693 21 -     60166 CTT-TTG-A----GTCTAC----GGTCC----AGA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12629 21 -     67232 CTT-TTG-A----GTCTAC----GGTCC----AGA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40545 21 -     90634 CTT-TTG-A----GTCTAC----GGTCC----AGA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42013 21 +     89403 CTT-TTG-A----GTCTAC----GGTCC----AGA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175547 21 - 189387572 CTT-TTG-A----GTCTAT----GGTCT----ATT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190365 21 -   9816681 CTG-TTG-A----GTCTAT----GGTCT----ATT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25191 21 +     69807 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42386 21 -     80239 ctt-ttg-a----gtctat----ggtcc----att
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980557 20 +   4620579 -TT-TGG-A----GACTAT----GGTTT----CTA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564024 21 -   2598838 TTT-TGG-A----GACTAT----GGTTT----CTA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1660 21 -      7103 ttt-tgg-a----gactat----ggttt----cta
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2257 21 -     11706 ttt-tgg-a----gactat----ggttt----cta
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            5993 21 -     30655 ttt-tgg-a----gactat----ggttt----cta
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32318 21 +     46564 ttt-tgg-a----gactat----ggttt----cta
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92589 21 -     98465 ttt-tgg-a----gactat----ggttt----cta
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6226 21 +     35169 ttt-tgg-a----gactat----ggttt----cta
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34160  3 +     52041 --------------------------------aca
i Psammomys_obesus.NESX01036366.1                        I 29 C 0
s Pteronotus_parnellii.KE847780.1                            49870 19 -     66298 ttt-tgg-a----gtctat----agtt------tc
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2481 21 -     18639 ttt-ggg-g----gtctag----agttt----atg
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 2
s Pteropus_alecto.KB030862.1                               5838837 21 -  28871421 ttt-tgg-a----gtctac----aactt----atc
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535402 21 -   4952924 ttt-tgg-a----gtctac----aattt----atc
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096849 20 +  38429054 ttt-tgg-a----gtctag----agttt----gt-
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24601 21 +     91421 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151094 21 -   7812017 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5471 21 +     72585 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020447  3 -  90668790 --------------------------------ata
i Rattus_norvegicus.chr16                                I 29 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911503 21 +   3329780 ttt-tgg-a----gtctac----agttt----atc
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26411 21 +     27361 ctt-ttg-a----gtctat----ggtcc----att
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119778 21 + 195417433 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234019 21 -   7961872 ctt-ttg-a----gtctat----ggtcc----att
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72820 21 -    116970 ttt-tgg-a----gtctac----aattt----atc
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1793 21 +     27962 CTT-TTC-A----GTCTAT----GGTCC----ATA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1801 21 +      6077 CTT-TTC-A----GTCTAT----GGTCC----ATA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1820 21 +      5971 CTT-TTG-A----GTCTAT----GGTCC----ATA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1874 21 +      5932 CTT-TTG-A----GTCTAT----GGTCC----ATA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                                58 21 -      4390 CTT-TTG-A----GTCTAT----GGTCC----ATA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389141 21 - 209938924 CTT-TTC-A----GTCTAT----GGTCC----ATA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1822 21 +      5979 CTT-TTG-A----GTCTAT----GGTCC----ATA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2188 21 -      4301 CTT-TTC-A----GTCTAT----GGTCC----ATA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236279 21 +   5703754 CTT-TTG-A----GTCTGT----GGTCC----ATA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5869 21 +     21866 CTT-TTG-A----GTCTGT----GGTCC----ATA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114033 21 +    313613 ttt-tgg-a----gtctac----actta----aca
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22918 21 +     27374 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26437 21 +     58920 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12933 21 -     45317 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20591 21 -     42441 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23271 21 -     29113 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26340 21 -     48123 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46540  3 +     77746 --------------------------------ATA
i Sigmodon_hispidus.SigHis_scaffold_20193                I 49 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856335 21 -   1910179 ttt-gaa-g----ccctac----aattt----aca
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866300  3 +   3870691 --------------------------------GCA
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4479 21 -     97271 ttg-ggg-a----gtctgg----acttt----atg
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 2
s Suricata_suricatta.SurSur_flattened_line_6629             122542 20 +    196729 ttt-tgg-a----gtccag----agttt----gt-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 4
s Symphalangus_syndactylus.tarseq_199                       388555 21 +   1523678 CTT-TTG-C----TTCTAT----GGTCC----ATT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11642 21 +     22964 ttt-tgg-a----gtctac----agctt----atc
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 658 20 +      5583 t-t-ttg-c----atcttt----agttt----cta
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189369  4 +    199430 ttt-T------------------------------
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103325  4 -    539355 TTt-t------------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4895 25 +      6850 TTT-TGG-C----GTCTATTTGGGGTAG----ATG
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4936 25 +     20590 TTT-TGG-C----GTCTATTTGGGGTAG----ATG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350795 21 - 186847797 CTT-TTG-A----GTCTAT----GGTCC----ATT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22262  3 -     33621 --------------------------------ACA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17783 20 -     31044 t-t-tgg-a----gtctac----agttt----ata
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477686 21 -    610378 ttt-tgg-a----gtttat----agttc----atc
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18482 21 +     26378 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31147 21 -     78344 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17803 21 +     25722 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26028 21 -     62838 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26145 21 +     46913 CTT-TTG-A----GTCTGT----GTTCC----ATT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6953 21 -     28527 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27967 21 -     64340 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26004 21 -     63452 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7447 21 +     22490 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          875 21 -      6147 CTT-TTG-A----GTCTGT----GGTCC----ATT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7850 21 -     13050 ctt-ttg-a----gtctgt----ggtcc----att
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253089 21 -   6242583 ctt-ttg-a----gtctgt----ggtcc----att
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58839 21 +     59866 CTT-TTG-A----GTCTGT----GTTCC----ATT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831886  9 -   4065304 ------------------T----GATCT----ATA
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6166  9 -     70247 ------------------t----gatct----ata
i Tupaia_tana.TupTan_flattened_line_394                  I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105257 21 -    105689 TTT-AGG-A----GTTTAC----ACTTA----ACA
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179830 21 +   5085361 ttt-tag-g----ttccag----agttt----atg
i Ursus_maritimus.KK499267.1                             C 0 I 2
s Varecia_rubra.k141_787544                                  23199 21 -     30710 ttt-tgg-a----gactat----ggttt----cta
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22106 21 -    147434 ttt-tgg-a----gactat----ggttt----cta
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                102993 21 -    112863 ttt-tgg-a----gtctag----agttt----gtg
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172072  3 -    224448 --------------------------------aca
i Xerus_inauris.XerIna_scaffold_2302                     I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26645 22 -     86975 ttt-tgggg----gtctag----agttt----atg
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_230229                      1319  3 +      2695 --------------------------------ACA
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 2 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    42585 403 +    145209 I
e Echinops_telfairi.JH980293.1                            62851496 405 - 111700974 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    90197 36 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39489937 72 + 130317789 I
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3075 1 +     36723 T
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413333 1 +  29979442 t
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 2 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15964 1 -     61208 T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45470 1 +     53615 t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41410 1 +     44087 T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14050 1 -     21945 T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15726 1 +     32033 T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70179 1 -     84148 T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42412 1 -     78289 T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41858 1 +     55831 T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40300 1 -     64179 T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21946 1 -     24835 T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38929 1 +     45454 T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44627 1 +     70886 T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6752 1 +     30854 T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30891 1 +     42133 T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174675 1 -    412891 t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48701 1 -     65372 T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42448 1 +     43593 T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670461 1 +   5030052 T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22103 1 -     23494 T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7239 1 +      8415 T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14000 1 -     32367 a
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18281 1 -     45910 T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2960 1 -     15198 t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272691 1 +  21539123 T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8858 1 +     48076 T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3995 1 -     28759 T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31548 1 +     44353 T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46919 1 -     71267 T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20978 1 -     33135 T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4166 1 +     11645 t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4172 1 -     19611 t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5882 1 +     28062 T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41176 1 -     91139 T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18702 1 +     95584 T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18615 1 +    119600 T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8091 1 +     18648 T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7751 1 -     13885 T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16452 1 +     17162 T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451407 1 + 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17700 1 -     18408 T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503381 1 +  60362399 t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7017 1 -     23171 t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220360 1 +   9314153 T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613495 1 +  59632846 t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105076 1 -  63665305 t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3030 1 +      5315 t
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993929 1 +  23392119 t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997371 1 +  23407841 t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60472 1 -     66877 T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2984 1 -     12580 T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40870 1 +     53515 T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369080 1 -  26074798 T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5969 1 -     34880 T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65064 1 -     89041 T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490138 1 -  27778364 t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16971 1 +     27315 t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138649 1 -   4669795 T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42389 1 +     47900 T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42222 1 -     44860 T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42205 1 -    148725 T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25303 1 -     40656 T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5272 1 +     20796 T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9462 1 -     17524 T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25184 1 -     34525 T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9893 1 -     25376 T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362492 1 -  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268200 1 +  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29661 1 -     45857 T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25481 1 -     32606 T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1634 1 +      8499 T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23153 1 +     70610 T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20078 1 +     36323 T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10792 1 -     19938 t
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28600 1 -     33796 T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3130 1 -     15404 t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6966 1 -     32913 T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17379 1 -     40346 T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17634 1 +    216457 T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17427 1 +     39636 T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1816 1 +      5346 T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40522 1 -    112038 T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6094 1 +     34062 T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340975 1 +  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7520 1 -     44032 T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302300 1 - 135778131 T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406735 1 -   2368649 T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376611 1 - 200372422 t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                160 1 -     84244 t
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805243 1 +  53390261 T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           730 1 -      8242 t
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40294 1 -     83289 T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112564 1 - 224834208 t
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642806 1 -   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2957 1 +     50838 t
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1554 1 +     36344 T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108123 1 -   2246927 t
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290547 1 +  12879189 t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862697 1 -  20541912 t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662431 1 -   1390856 t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137215 1 -    198055 t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96433 1 -    115145 T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948341 1 -  37912305 T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3288 1 -     10735 T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7875 1 +     14636 T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851901 1 - 111700974 c
i Echinops_telfairi.JH980293.1                           I 405 C 0
s Eidolon_helvum.AWHC01266696.1                               4264 1 +     19438 t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105434 1 -  10337057 C
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28505 1 +    110024 t
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10485 1 +     18970 t
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913914 1 +  41312741 t
i Enhydra_lutris.KZ291758.1                              I 2 C 0
s Eptesicus_fuscus.JH977646.1                             12576331 1 +  14770903 t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039413 1 -   4378816 t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373347 1 +  39960074 t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410133 1 -    498745 t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260498 1 +  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12702 1 -     24895 t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40414 1 -     70999 t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84373 1 +    112731 t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40946 1 +     68309 t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51271 1 -     65740 T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21901 1 -     75513 T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46094 1 -     97555 T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2821 1 +     30972 t
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40544 1 -     52037 t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56945 1 -    111500 t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg3793                                     122291 1 -    137831 t
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5831 1 +     22493 t
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17873 1 -     32986 t
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17037 1 +     18121 t
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               3412 1 -      8343 T
i Gorilla_beringei.k141_3358147                          I 21 C 0
s Gorilla_gorilla.LT578341.1                                252423 1 - 186649187 t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12630 1 -     40692 t
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34031 1 +     49394 t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58900 1 -     66874 t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7773 1 -     42923 t
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14773 1 -     53142 t
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925016 1 -  22651954 t
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548177 1 -   1711038 t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47493 1 +     49977 c
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140416 1 -    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69342 1 +    143317 T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3451 1 +     12352 T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10634 1 +     55766 T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050230 1 + 191637585 T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799108 1 +  11177569 T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384734 1 +   7955117 A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     286 1 +     11955 T
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237147 1 +   9596543 T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41234 1 +    110728 T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59805 1 -     65777 t
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757421 1 +  30322482 t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1903 1 -     13097 T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1854 1 +      5940 T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1485 1 -      5717 T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8100 1 -     11567 T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9481 1 -     12945 T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6956 1 +     29618 T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6953 1 +     31569 T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6963 1 +     24756 t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6957 1 +     16388 T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811264 1 -   3914936 t
i Leptonychotes_weddellii.KB714746.1                     I 2 C 0
s Lepus_americanus.LepAme_scaffold_56121                     13719 1 +     24238 t
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330602 1 -   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8070 1 +     19643 T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041730 1 -   6120653 T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078246 1 +  43346337 c
i Loxodonta_africana.GL010049.1                          I 148 C 0
s Lycaon_pictus.CM007581.1                                41612650 1 +  59628241 t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42919 1 -     61512 T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370580 1 -  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22835 1 +     30207 T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19938 1 -     24934 T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22787 1 +     30527 T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33977 1 -     50087 T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43748 1 +     51645 T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412916 1 - 187317192 T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397139 1 +  25927173 T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46303 1 -     62418 T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22958 1 +     24253 T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42779 1 +     59329 T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268712 1 +    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19893 1 +     21031 T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  490 1 +     17132 T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221229 1 -    270270 t
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319990 1 +  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354822 1 -    752769 T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671513 1 -    737560 t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218806 1 +    317179 t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498943 1 +  40650429 A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148432 1 +    207569 t
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23783 1 -     74585 t
i Mellivora_capensis.MelCap_flattened_line_19308         I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46625 1 -    140813 T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 49
s Mesocricetus_auratus.KB708134.1                         17427126 1 +  29670104 t
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 7863 1 +     17804 T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8647 1 -     12984 T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16598 1 -     26561 T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982568 1 +  93316391 T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    42988 1 +    145209 c
i Microgale_talazaci.MicTal_scaffold_6613                I 403 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182645 1 +    200668 t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360746 1 -   8254450 t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39647 1 -     48117 T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20017 1 -     27822 T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6274 1 +     27589 t
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 2 C 0
s Mirza_zaza.k141_766280                                     50359 1 -     62432 t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176829 1 +    366855 T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36675 1 +     47283 t
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    402 1 +      5579 t
i Mus_caroli.FMAL02030609.1                              C 0 I 69
s Mus_musculus.chr8                                       41682357 1 + 129401213 t
i Mus_musculus.chr8                                      C 0 I 57
s Mustela_putorius.JH418006.1                             14352727 1 +  14710649 t
i Mustela_putorius.JH418006.1                            I 2 C 0
s Myotis_brandtii.KE162005.1                               9790719 1 +  10118263 t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385081 1 +   6019432 t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380901 1 +   4330536 t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3460 1 +      3929 t
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117560 1 +    130748 t
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26598 1 +     34575 T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466661 1 -  31847680 t
i Neomonachus_schauinslandi.NINY01007730.1               I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125623 1 -    149072 C
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51340 1 -    132029 T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7435 1 -     16345 T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13320 1 +     22201 T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411604 1 -  22158432 T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23718 1 -     54323 T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196250 1 +   9404916 t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634038 1 + 196305487 C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              796 1 -      3937 C
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562288 1 - 199412804 C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11045307 1 -  11899542 t
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449471 1 +   2017862 t
i Odobenus_rosmarus.KB229312.1                           I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90233 1 -    140218 T
i Ondatra_zibethicus.OndZib_scaffold_7387                I 36 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105069 1 +    107918 C
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11353 1 -     14239 c
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107100606 1 - 174332312 N
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37290 1 +    559221 t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37412 1 -     51505 t
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350426 1 +   1103335 T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470428 1 - 189151597 T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   240830 1 - 183742232 T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7294 1 +     21308 T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288333 1 -  20919399 T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19949 1 -     27687 T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13085 1 +     16796 T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19895 1 -     23640 T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23723 1 +     31479 T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16081 1 -     24908 T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37542 1 +     38305 T
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244714 1 +  18517816 t
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29937 1 -     56120 T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6749 1 +      7560 T
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62457 1 -     63152 T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            45056 1 +     45295 T
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2734 1 +      5735 T
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              852 1 +     22231 t
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62869 1 +    207309 T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3965 1 -     25401 T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29704 1 +     58159 T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29980 1 +     63561 T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29743 1 +     51148 T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554712 1 -   4542175 T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29727 1 +     51125 T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6136 1 +     39866 T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1221 1 -      9282 T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40625 1 -     87950 T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41018 1 -     88961 T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5717 1 -     39403 T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40669 1 +     87928 T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5714 1 -     60166 T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12650 1 -     67232 T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40566 1 -     90634 T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42034 1 +     89403 T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175568 1 - 189387572 T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190386 1 -   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25212 1 +     69807 T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42407 1 -     80239 t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980577 1 +   4620579 T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564045 1 -   2598838 T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1681 1 -      7103 t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2278 1 -     11706 t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6014 1 -     30655 t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32339 1 +     46564 t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92610 1 -     98465 t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6247 1 +     35169 t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34163 1 +     52041 t
i Psammomys_obesus.NESX01036366.1                        C 0 I 49
s Pteronotus_parnellii.KE847780.1                            49889 1 -     66298 t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2504 1 -     18639 t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 2 C 0
s Pteropus_alecto.KB030862.1                               5838858 1 -  28871421 t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535423 1 -   4952924 t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24622 1 +     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151115 1 -   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5492 1 +     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020450 1 -  90668790 t
i Rattus_norvegicus.chr16                                C 0 I 50
s Rhinolophus_sinicus.LVEH01000134.1                       2911524 1 +   3329780 t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26432 1 +     27361 t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119799 1 + 195417433 T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234040 1 -   7961872 t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72841 1 -    116970 t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1814 1 +     27962 T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1822 1 +      6077 T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1841 1 +      5971 T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1895 1 +      5932 T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                                79 1 -      4390 T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389162 1 - 209938924 T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1843 1 +      5979 T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2209 1 -      4301 T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236300 1 +   5703754 T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5890 1 +     21866 T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114054 1 +    313613 t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22939 1 +     27374 T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26458 1 +     58920 T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12954 1 -     45317 T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20612 1 -     42441 T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23292 1 -     29113 T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26361 1 -     48123 T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46543 1 +     77746 T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856356 1 -   1910179 t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866303 1 +   3870691 A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4502 1 -     97271 t
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 2 C 0
s Symphalangus_syndactylus.tarseq_199                       388576 1 +   1523678 T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11663 1 +     22964 t
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 678 1 +      5583 t
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350816 1 - 186847797 T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22265 1 -     33621 T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17803 1 -     31044 t
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477707 1 -    610378 t
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18503 1 +     26378 T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31168 1 -     78344 T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17824 1 +     25722 T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26049 1 -     62838 T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26166 1 +     46913 T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6974 1 -     28527 T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27988 1 -     64340 T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26025 1 -     63452 T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7468 1 +     22490 T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          896 1 -      6147 T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7871 1 -     13050 t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253110 1 -   6242583 t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58860 1 +     59866 T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831895 1 -   4065304 T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6175 1 -     70247 t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105278 1 -    105689 T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179853 1 +   5085361 t
i Ursus_maritimus.KK499267.1                             I 2 C 0
s Varecia_rubra.k141_787544                                  23220 1 -     30710 t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22127 1 -    147434 t
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103014 1 -    112863 t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172075 1 -    224448 a
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26669 1 -     86975 t
i Zalophus_californianus.ZalCal_flattened_line_17732     I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1322 1 +      2695 T
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tarsius_wallacei.k141_226975                                4961 0 +     20590 C
e Tarsius_lariang.k141_1780720                                4920 0 +      6850 C
e Tapirus_terrestris.TapTer_scaffold_755                    103329 0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      189373 0 +    199430 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122562 4 +    196729 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096869 0 +  38429054 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12877 0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3970272 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18459552 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   22226 0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             80115 395 -     86153 I
e Mus_spretus.CM004101.1                                  39489937 72 + 130317789 I
e Mus_pahari.LT608297.1                                   58215754 5 +  89631738 I
e Mungos_mungo.MunMun_flattened_line_18455                   16149 2 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66881 2 +     83186 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28396 4 -    327341 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 25402 4 -     30238 I
e Felis_catus_fca126.CM031415.1                          185114298 4 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1892 4 +     87169 I
e Cephalopachus_bancanus.k141_72622                           1402 0 -      1636 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Carlito_syrichta.NW_007259797.1                           268230 0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810606 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3076  2 +     36723 C-----------------------------T
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413334  2 +  29979442 g-----------------------------t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15965  2 -     61208 G-----------------------------T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45471  2 +     53615 c-----------------------------t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41411  2 +     44087 C-----------------------------T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14051  2 -     21945 C-----------------------------T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15727  2 +     32033 C-----------------------------T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70180  2 -     84148 C-----------------------------T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42413  2 -     78289 C-----------------------------T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41859  2 +     55831 C-----------------------------T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40301  2 -     64179 C-----------------------------T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21947  2 -     24835 C-----------------------------T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38930  2 +     45454 C-----------------------------T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44628  2 +     70886 C-----------------------------T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6753  2 +     30854 C-----------------------------T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30892  2 +     42133 C-----------------------------T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174676  2 -    412891 c-----------------------------t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48702  2 -     65372 C-----------------------------T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42449  2 +     43593 C-----------------------------T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670462  2 +   5030052 C-----------------------------T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22104  2 -     23494 C-----------------------------T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7240  2 +      8415 C-----------------------------T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14001 20 -     32367 g----------tatcttggagttatactt-t
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18282  2 -     45910 T-----------------------------G
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2961  2 -     15198 c-----------------------------t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272692  2 +  21539123 C-----------------------------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8859  2 +     48076 C-----------------------------T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3996  2 -     28759 C-----------------------------T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31549  2 +     44353 C-----------------------------T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46920  2 -     71267 C-----------------------------T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20979  2 -     33135 C-----------------------------T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4167  2 +     11645 c-----------------------------t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4173  2 -     19611 c-----------------------------t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5883  2 +     28062 C-----------------------------T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41177  2 -     91139 C-----------------------------T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18703  2 +     95584 C-----------------------------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18616  2 +    119600 C-----------------------------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8092  2 +     18648 C-----------------------------T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7752  2 -     13885 C-----------------------------T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16453  2 +     17162 C-----------------------------T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451408  2 + 189096842 C-----------------------------T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17701  2 -     18408 C-----------------------------T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503382  2 +  60362399 a-----------------------------t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7018  2 -     23171 a-----------------------------t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220361  2 +   9314153 A-----------------------------T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613496  2 +  59632846 a-----------------------------t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105077  2 -  63665305 a-----------------------------t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268230  2 +    496798 C-----------------------------G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3031  2 +      5315 c-----------------------------t
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993930  2 +  23392119 g-----------------------------t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997372  2 +  23407841 g-----------------------------t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60473  2 -     66877 G-----------------------------T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2985  2 -     12580 C-----------------------------T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40871  2 +     53515 C-----------------------------T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369081  2 -  26074798 C-----------------------------T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5970  2 -     34880 C-----------------------------T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65065  2 -     89041 C-----------------------------T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1402  2 -      1636 T-----------------------------G
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490139  2 -  27778364 c-----------------------------t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16972  2 +     27315 c-----------------------------t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138650  2 -   4669795 C-----------------------------T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42390  2 +     47900 C-----------------------------T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42223  2 -     44860 C-----------------------------T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42206  2 -    148725 T-----------------------------T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25304  2 -     40656 C-----------------------------T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5273  2 +     20796 C-----------------------------T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9463  2 -     17524 C-----------------------------T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25185  2 -     34525 C-----------------------------T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9894  2 -     25376 C-----------------------------T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362493  2 -  39242232 C-----------------------------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268201  2 +  21565898 C-----------------------------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29662  2 -     45857 C-----------------------------T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25482  2 -     32606 C-----------------------------T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1635  2 +      8499 C-----------------------------T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23154  2 +     70610 C-----------------------------T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20079  2 +     36323 C-----------------------------T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10793  2 -     19938 c-----------------------------t
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28601  2 -     33796 C-----------------------------T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3131  2 -     15404 c-----------------------------t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6967  2 -     32913 C-----------------------------T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17380  2 -     40346 C-----------------------------T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17635  2 +    216457 C-----------------------------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17428  2 +     39636 C-----------------------------T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1817  2 +      5346 C-----------------------------T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40523  2 -    112038 C-----------------------------T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6095  2 +     34062 C-----------------------------T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340976  2 +  18827391 C-----------------------------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7521  2 -     44032 C-----------------------------T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302301  2 - 135778131 C-----------------------------T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406736  2 -   2368649 C-----------------------------T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376612  2 - 200372422 c-----------------------------t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                161  2 -     84244 c-----------------------------t
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805244  2 +  53390261 C-----------------------------T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           731  2 -      8242 c-----------------------------t
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40295  2 -     83289 A-----------------------------T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112565  2 - 224834208 a-----------------------------t
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642807  2 -   1526836 C-----------------------------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2958  2 +     50838 a-----------------------------t
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1555  2 +     36344 G-----------------------------T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108124  2 -   2246927 c-----------------------------t
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290548  2 +  12879189 c-----------------------------t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862698  2 -  20541912 c-----------------------------t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662432  2 -   1390856 c-----------------------------t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137216  2 -    198055 c-----------------------------t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96434  2 -    115145 A-----------------------------T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948342  2 -  37912305 c-----------------------------t
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3289  2 -     10735 C-----------------------------T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7876  2 +     14636 G-----------------------------T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851902  2 - 111700974 c-----------------------------c
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4265  2 +     19438 c-----------------------------t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105435  2 -  10337057 T-----------------------------T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28506  2 +    110024 g-----------------------------t
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10486  2 +     18970 g-----------------------------t
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913915  4 +  41312741 g--------------------------ct-t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576332  2 +  14770903 c-----------------------------c
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039414  2 -   4378816 c-----------------------------t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373348  2 +  39960074 c-----------------------------t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410134  2 -    498745 c-----------------------------t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260499  2 +  21539334 C-----------------------------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12703  2 -     24895 c-----------------------------t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40415  2 -     70999 c-----------------------------t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84374  2 +    112731 c-----------------------------t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40947  2 +     68309 c-----------------------------t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51272  2 -     65740 C-----------------------------T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21902  2 -     75513 C-----------------------------T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46095  2 -     97555 C-----------------------------T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2822  2 +     30972 c-----------------------------t
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40545  2 -     52037 c-----------------------------t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56946  2 -    111500 c-----------------------------t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg3793                                     122292  2 -    137831 t-----------------------------g
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5832  2 +     22493 t-----------------------------g
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17874  2 -     32986 t-----------------------------g
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17038  2 +     18121 c-----------------------------t
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               3413  2 -      8343 C-----------------------------T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252424  2 - 186649187 c-----------------------------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12631  2 -     40692 c-----------------------------t
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34032  2 +     49394 c-----------------------------t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58901  2 -     66874 c-----------------------------t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7774  2 -     42923 c-----------------------------t
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14774  2 -     53142 c-----------------------------t
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925017  2 -  22651954 g-----------------------------t
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548178  2 -   1711038 c-----------------------------t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47494  2 +     49977 c-----------------------------t
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140417  2 -    630532 C-----------------------------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69343  2 +    143317 G-----------------------------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3452  2 +     12352 C-----------------------------T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10635  2 +     55766 C-----------------------------T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050231  2 + 191637585 C-----------------------------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799109  2 +  11177569 C-----------------------------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384735 20 +   7955117 G--TA------TTATCAT--G-TTacagttt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     287  2 +     11955 C-----------------------------T
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237148  2 +   9596543 G-----------------------------T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41235  2 +    110728 C-----------------------------T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59806  2 -     65777 c-----------------------------t
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757422  2 +  30322482 c-----------------------------t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1904  2 -     13097 C-----------------------------T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1855  2 +      5940 C-----------------------------T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1486  2 -      5717 C-----------------------------T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8101  2 -     11567 C-----------------------------T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9482  2 -     12945 C-----------------------------T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6957  2 +     29618 C-----------------------------T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6954  2 +     31569 C-----------------------------T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6964  2 +     24756 c-----------------------------t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6958  2 +     16388 C-----------------------------T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811265  2 -   3914936 a-----------------------------t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     13720  2 +     24238 a-----------------------------t
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 1337
s Lophocebus_aterrimus.ctg367                               330603  2 -   1826925 C-----------------------------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8071  2 +     19643 T-----------------------------G
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041731  2 -   6120653 T-----------------------------G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078247  2 +  43346337 c-----------------------------c
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41612651  2 +  59628241 a-----------------------------t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42920  2 -     61512 C-----------------------------T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370581  2 -  60120075 C-----------------------------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22836  2 +     30207 C-----------------------------T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19939  2 -     24934 C-----------------------------T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22788  2 +     30527 C-----------------------------T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33978  2 -     50087 C-----------------------------T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43749  2 +     51645 C-----------------------------T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412917  2 - 187317192 C-----------------------------T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397140  2 +  25927173 C-----------------------------T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46304  2 -     62418 C-----------------------------T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22959  2 +     24253 C-----------------------------T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42780  2 +     59329 C-----------------------------T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268713  2 +    668171 C-----------------------------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19894  2 +     21031 C-----------------------------T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  491  2 +     17132 C-----------------------------T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221230  2 -    270270 c-----------------------------t
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319991  2 +  24302211 C-----------------------------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354823  2 -    752769 C-----------------------------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671514  2 -    737560 c-----------------------------t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218807  2 +    317179 c-----------------------------t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498944 20 +  40650429 GTATTCTCA-AGT-T--------acagtt-t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148433  2 +    207569 c-----------------------------t
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23784  4 -     74585 g--------------------------ct-t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46675  2 -    140813 A-----------------------------T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 49 C 0
s Mesocricetus_auratus.KB708134.1                         17427127  2 +  29670104 a-----------------------------t
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 7864  2 +     17804 C-----------------------------T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8648  2 -     12984 C-----------------------------T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16599  2 -     26561 C-----------------------------T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982569  2 +  93316391 C-----------------------------T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    42989  2 +    145209 c-----------------------------t
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182646  2 +    200668 c-----------------------------t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360747  2 -   8254450 c-----------------------------t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39648  2 -     48117 C-----------------------------T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20018  2 -     27822 C-----------------------------T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6275  2 +     27589 a-----------------------------t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50360  2 -     62432 c-----------------------------t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176830  2 +    366855 C-----------------------------T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36676  2 +     47283 c-----------------------------t
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    472  2 +      5579 a-----------------------------c
i Mus_caroli.FMAL02030609.1                              I 69 C 0
s Mus_musculus.chr8                                       41682415  2 + 129401213 a-----------------------------c
i Mus_musculus.chr8                                      I 57 C 0
s Mus_spretus.CM004101.1                                  39490009  2 + 130317789 a-----------------------------c
i Mus_spretus.CM004101.1                                 I 72 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80510  1 -     86153 ------------------------------T
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 395 C 0
s Mustela_putorius.JH418006.1                             14352728  4 +  14710649 g--------------------------ct-t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790720  2 +  10118263 c-----------------------------t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385082  2 +   6019432 c-----------------------------t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380902  2 +   4330536 c-----------------------------t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3461  2 +      3929 c-----------------------------t
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117561  2 +    130748 c-----------------------------t
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26599  2 +     34575 C-----------------------------T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466662  2 -  31847680 a-----------------------------t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125624  2 -    149072 C-----------------------------C
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51341  2 -    132029 C-----------------------------T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7436  2 -     16345 C-----------------------------T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13321  2 +     22201 C-----------------------------T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411605  2 -  22158432 C-----------------------------T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23719  2 -     54323 C-----------------------------T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196251  2 +   9404916 a-----------------------------t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634039  2 + 196305487 T-----------------------------G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              797  2 -      3937 T-----------------------------G
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562289  2 - 199412804 T-----------------------------G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11045308  2 -  11899542 c-----------------------------t
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449472  2 +   2017862 g-----------------------------t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90234  2 -    140218 A-----------------------------T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105070  2 +    107918 G-----------------------------T
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11354  2 -     14239 c-----------------------------c
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107100607  2 - 174332312 N-----------------------------N
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1191
s Otocyon_megalotis.JAEUCK010005147.1                        37291  2 +    559221 a-----------------------------t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37413  2 -     51505 t-----------------------------g
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350427  2 +   1103335 T-----------------------------G
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470429  2 - 189151597 C-----------------------------T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   240831  2 - 183742232 C-----------------------------T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7295  2 +     21308 T-----------------------------T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288334  2 -  20919399 C-----------------------------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19950  2 -     27687 T-----------------------------T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13086  2 +     16796 C-----------------------------T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19896  2 -     23640 C-----------------------------T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23724  2 +     31479 T-----------------------------G
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16082  2 -     24908 T-----------------------------G
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37543  2 +     38305 C-----------------------------T
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244715  2 +  18517816 g-----------------------------t
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29938  2 -     56120 A-----------------------------T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6750  2 +      7560 C-----------------------------T
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62458  2 -     63152 C-----------------------------T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            45057  2 +     45295 C-----------------------------T
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2735  2 +      5735 C-----------------------------T
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              853  2 +     22231 c-----------------------------t
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62870  2 +    207309 C-----------------------------T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3966  2 -     25401 C-----------------------------T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29705  2 +     58159 C-----------------------------T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29981  2 +     63561 C-----------------------------T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29744  2 +     51148 C-----------------------------T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554713  2 -   4542175 C-----------------------------T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29728  2 +     51125 C-----------------------------T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6137  2 +     39866 C-----------------------------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1222  2 -      9282 C-----------------------------T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40626  2 -     87950 C-----------------------------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41019  2 -     88961 C-----------------------------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5718  2 -     39403 C-----------------------------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40670  2 +     87928 C-----------------------------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5715  2 -     60166 C-----------------------------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12651  2 -     67232 C-----------------------------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40567  2 -     90634 C-----------------------------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42035  2 +     89403 C-----------------------------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175569  2 - 189387572 C-----------------------------T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190387  2 -   9816681 C-----------------------------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25213  2 +     69807 C-----------------------------T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42408  2 -     80239 c-----------------------------t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980578  2 +   4620579 C-----------------------------T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564046  2 -   2598838 C-----------------------------T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1682  2 -      7103 c-----------------------------t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2279  2 -     11706 c-----------------------------t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6015  2 -     30655 c-----------------------------t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32340  2 +     46564 c-----------------------------t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92611  2 -     98465 c-----------------------------t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6248  2 +     35169 c-----------------------------t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34213  2 +     52041 a-----------------------------t
i Psammomys_obesus.NESX01036366.1                        I 49 C 0
s Pteronotus_parnellii.KE847780.1                            49890  2 -     66298 c-----------------------------t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2505  4 -     18639 g--------------------------ct-t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838859  2 -  28871421 c-----------------------------t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535424  2 -   4952924 c-----------------------------t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24623  2 +     91421 C-----------------------------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151116  2 -   7812017 C-----------------------------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5493  2 +     72585 C-----------------------------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020501  4 -  90668790 a--------------------------ac-c
i Rattus_norvegicus.chr16                                I 50 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911525  2 +   3329780 c-----------------------------t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26433  2 +     27361 c-----------------------------t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119800  2 + 195417433 C-----------------------------T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234041  2 -   7961872 c-----------------------------t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72842  2 -    116970 c-----------------------------t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1815  2 +     27962 C-----------------------------T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1823  2 +      6077 C-----------------------------T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1842  2 +      5971 C-----------------------------T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1896  2 +      5932 C-----------------------------T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                                80  2 -      4390 C-----------------------------T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389163  2 - 209938924 C-----------------------------T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1844  2 +      5979 C-----------------------------T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2210  2 -      4301 C-----------------------------T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236301  2 +   5703754 C-----------------------------T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5891  2 +     21866 C-----------------------------T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114055  2 +    313613 c-----------------------------t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22940  2 +     27374 C-----------------------------T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26459  2 +     58920 C-----------------------------T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12955  2 -     45317 C-----------------------------T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20613  2 -     42441 C-----------------------------T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23293  2 -     29113 C-----------------------------T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26362  2 -     48123 C-----------------------------T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46544 30 +     77746 ACATACACACAATATTATATGCATGTATA-T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856357  2 -   1910179 c-----------------------------t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866304 20 +   3870691 G--TA------TTATCAT--G-TTacagttt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4503  2 -     97271 g-----------------------------t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388577  2 +   1523678 C-----------------------------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11664  2 +     22964 c-----------------------------c
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 679  2 +      5583 c-----------------------------t
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tarsius_lariang.k141_1780720                                4920  2 +      6850 C-----------------------------T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4961  2 +     20590 C-----------------------------T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350817  2 - 186847797 C-----------------------------T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22266  2 -     33621 G-----------------------------T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17804  2 -     31044 c-----------------------------t
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477708  2 -    610378 c-----------------------------t
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18504  2 +     26378 C-----------------------------T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31169  2 -     78344 C-----------------------------T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17825  2 +     25722 C-----------------------------T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26050  2 -     62838 C-----------------------------T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26167  2 +     46913 C-----------------------------T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6975  2 -     28527 C-----------------------------T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27989  2 -     64340 C-----------------------------T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26026  2 -     63452 C-----------------------------T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7469  2 +     22490 C-----------------------------T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          897  2 -      6147 C-----------------------------T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7872  2 -     13050 c-----------------------------t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253111  2 -   6242583 c-----------------------------t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58861  2 +     59866 C-----------------------------T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831896  2 -   4065304 C-----------------------------T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6176  2 -     70247 c-----------------------------t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105279  2 -    105689 C-----------------------------T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179854  2 +   5085361 g-----------------------------t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23221  1 -     30710 c------------------------------
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22128  1 -    147434 c------------------------------
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103015  2 -    112863 a-----------------------------t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172076 20 -    224448 g----------tattctgaagttacagtt-t
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26670  2 -     86975 g-----------------------------t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1323  2 +      2695 G-----------------------------T
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tapirus_terrestris.TapTer_scaffold_755                    103329  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      189373  0 +    199430 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122562  4 +    196729 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096869  0 +  38429054 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12877  0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3970272  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18459552  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   22226  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Mungos_mungo.MunMun_flattened_line_18455                   16149  2 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66881  2 +     83186 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28396  4 -    327341 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 25402  4 -     30238 I
e Felis_catus_fca126.CM031415.1                          185114298  4 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1892  4 +     87169 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810606  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3078 1 +     36723 A
s Allactaga_bullata.AllBul_scaffold_20030                    15967 1 -     61208 A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45473 1 +     53615 a
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41413 1 +     44087 A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14053 1 -     21945 A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15729 1 +     32033 A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70182 1 -     84148 A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42415 1 -     78289 A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41861 1 +     55831 A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40303 1 -     64179 A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21949 1 -     24835 A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38932 1 +     45454 A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44630 1 +     70886 A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6755 1 +     30854 A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30894 1 +     42133 A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174678 1 -    412891 g
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48704 1 -     65372 A
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42451 1 +     43593 A
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670464 1 +   5030052 A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22106 1 -     23494 A
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7242 1 +      8415 A
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14021 1 -     32367 t
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 7
s Arctocebus_calabarensis.k141_1364444                       18284 1 -     45910 A
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2963 1 -     15198 g
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272694 1 +  21539123 G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8861 1 +     48076 G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3998 1 -     28759 G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31551 1 +     44353 G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46922 1 -     71267 G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20981 1 -     33135 G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4169 1 +     11645 a
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4175 1 -     19611 a
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5885 1 +     28062 A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41179 1 -     91139 A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18705 1 +     95584 A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18618 1 +    119600 A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8094 1 +     18648 A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7754 1 -     13885 A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16455 1 +     17162 A
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451410 1 + 189096842 A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17703 1 -     18408 A
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268232 1 +    496798 A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3033 1 +      5315 g
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993932 1 +  23392119 a
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997374 1 +  23407841 a
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60475 1 -     66877 A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2987 1 -     12580 A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40873 1 +     53515 A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369083 1 -  26074798 A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5972 1 -     34880 A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65067 1 -     89041 A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1404 1 -      1636 A
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490141 1 -  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16974 1 +     27315 a
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138652 1 -   4669795 A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42392 1 +     47900 A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42225 1 -     44860 A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42208 1 -    148725 A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25306 1 -     40656 A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5275 1 +     20796 A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9465 1 -     17524 A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25187 1 -     34525 A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9896 1 -     25376 A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362495 1 -  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268203 1 +  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29664 1 -     45857 A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25484 1 -     32606 A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1637 1 +      8499 A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23156 1 +     70610 A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20081 1 +     36323 A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10795 1 -     19938 a
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28603 1 -     33796 A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3133 1 -     15404 a
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6969 1 -     32913 A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17382 1 -     40346 A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17637 1 +    216457 A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17430 1 +     39636 A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1819 1 +      5346 C
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40525 1 -    112038 A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6097 1 +     34062 A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340978 1 +  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7523 1 -     44032 A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302303 1 - 135778131 A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406738 1 -   2368649 A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376614 1 - 200372422 a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                163 1 -     84244 a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805246 1 +  53390261 G
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           733 1 -      8242 g
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40297 1 -     83289 A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112567 1 - 224834208 a
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642809 1 -   1526836 A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2960 1 +     50838 a
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1557 1 +     36344 A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108126 1 -   2246927 a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290550 1 +  12879189 a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862700 1 -  20541912 g
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662434 1 -   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137218 1 -    198055 a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96436 1 -    115145 A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948344 1 -  37912305 g
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3291 1 -     10735 G
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7878 1 +     14636 A
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851904 1 - 111700974 a
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4267 1 +     19438 a
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105437 1 -  10337057 A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28508 1 +    110024 g
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10488 1 +     18970 g
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576334 1 +  14770903 g
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039416 1 -   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373350 1 +  39960074 a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410136 1 -    498745 a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260501 1 +  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12705 1 -     24895 a
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40417 1 -     70999 a
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84376 1 +    112731 a
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40949 1 +     68309 a
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51274 1 -     65740 A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21904 1 -     75513 A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46097 1 -     97555 A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2824 1 +     30972 a
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40547 1 -     52037 a
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56948 1 -    111500 a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg3793                                     122294 1 -    137831 a
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5834 1 +     22493 a
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17876 1 -     32986 a
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17040 1 +     18121 a
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               3415 1 -      8343 A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252426 1 - 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12633 1 -     40692 a
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34034 1 +     49394 a
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58903 1 -     66874 a
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7776 1 -     42923 a
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14776 1 -     53142 a
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925019 1 -  22651954 a
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548180 1 -   1711038 a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47496 1 +     49977 a
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140419 1 -    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69345 1 +    143317 A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3454 1 +     12352 A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10637 1 +     55766 A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050233 1 + 191637585 A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799111 1 +  11177569 A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384755 1 +   7955117 t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 7
s Indri_indri.k141_2415743                                     289 1 +     11955 A
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237150 1 +   9596543 A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41237 1 +    110728 A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59808 1 -     65777 g
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757424 1 +  30322482 a
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1906 1 -     13097 A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1857 1 +      5940 A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1488 1 -      5717 A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8103 1 -     11567 A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9484 1 -     12945 A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6959 1 +     29618 A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6956 1 +     31569 A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6966 1 +     24756 a
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6960 1 +     16388 A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     15059 1 +     24238 A
i Lepus_americanus.LepAme_scaffold_56121                 I 1337 I 810
s Lophocebus_aterrimus.ctg367                               330605 1 -   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8073 1 +     19643 A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041733 1 -   6120653 A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078249 1 +  43346337 a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Macaca_arctoides.k141_1757516                              42922 1 -     61512 A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370583 1 -  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22838 1 +     30207 A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19941 1 -     24934 A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22790 1 +     30527 A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33980 1 -     50087 A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43751 1 +     51645 A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412919 1 - 187317192 A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397142 1 +  25927173 A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46306 1 -     62418 A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22961 1 +     24253 A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42782 1 +     59329 A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268715 1 +    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19896 1 +     21031 A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  493 1 +     17132 A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221232 1 -    270270 a
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319993 1 +  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354825 1 -    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671516 1 -    737560 a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218809 1 +    317179 a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498964 1 +  40650429 t
i Marmota_marmota.CZRN01000018.1                         C 0 I 7
s Megaderma_lyra.MegLyr_scaffold_4542                       148435 1 +    207569 g
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46677 1 -    140813 A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427129 1 +  29670104 a
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 7866 1 +     17804 A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8650 1 -     12984 A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16601 1 -     26561 A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982571 1 +  93316391 A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    42991 1 +    145209 t
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182648 1 +    200668 g
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360749 1 -   8254450 g
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39650 1 -     48117 G
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20020 1 -     27822 A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     50362 1 -     62432 a
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176832 1 +    366855 G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36678 1 +     47283 g
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    474 1 +      5579 a
i Mus_caroli.FMAL02030609.1                              C 0 I 16
s Mus_musculus.chr8                                       41682417 1 + 129401213 a
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39490011 1 + 130317789 a
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80511 1 -     86153 A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 7
s Myotis_brandtii.KE162005.1                               9790722 1 +  10118263 g
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385084 1 +   6019432 g
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380904 1 +   4330536 g
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3463 1 +      3929 g
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117563 1 +    130748 a
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26601 1 +     34575 A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125626 1 -    149072 C
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51343 1 -    132029 A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7438 1 -     16345 A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13323 1 +     22201 A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411607 1 -  22158432 A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23721 1 -     54323 A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93634041 1 + 196305487 A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              799 1 -      3937 A
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562291 1 - 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11045310 1 -  11899542 a
i Octodon_degus.JH651603.1                               C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90236 1 -    140218 A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105072 1 +    107918 A
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11356 1 -     14239 a
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37415 1 -     51505 a
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350429 1 +   1103335 A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470431 1 - 189151597 A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   240833 1 - 183742232 A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7297 1 +     21308 A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288336 1 -  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19952 1 -     27687 A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13088 1 +     16796 A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19898 1 -     23640 A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23726 1 +     31479 A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16084 1 -     24908 A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37545 1 +     38305 G
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244717 1 +  18517816 a
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29940 1 -     56120 T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2495623                            6752 1 +      7560 A
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62460 1 -     63152 A
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            45059 1 +     45295 A
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2737 1 +      5735 A
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              855 1 +     22231 a
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62872 1 +    207309 A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3968 1 -     25401 A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29707 1 +     58159 A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29983 1 +     63561 A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29746 1 +     51148 A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554715 1 -   4542175 A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29730 1 +     51125 A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6139 1 +     39866 A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1224 1 -      9282 A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40628 1 -     87950 A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41021 1 -     88961 A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5720 1 -     39403 A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40672 1 +     87928 A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5717 1 -     60166 A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12653 1 -     67232 A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40569 1 -     90634 A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42037 1 +     89403 A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175571 1 - 189387572 A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190389 1 -   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25215 1 +     69807 A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42410 1 -     80239 a
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980580 1 +   4620579 A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564048 1 -   2598838 A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1684 1 -      7103 a
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2281 1 -     11706 a
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6017 1 -     30655 a
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32342 1 +     46564 a
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92613 1 -     98465 a
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6250 1 +     35169 a
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34215 1 +     52041 a
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49892 1 -     66298 g
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                               5838861 1 -  28871421 g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535426 1 -   4952924 g
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24625 1 +     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151118 1 -   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5495 1 +     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020505 1 -  90668790 a
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911527 1 +   3329780 a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26435 1 +     27361 a
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119802 1 + 195417433 A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234043 1 -   7961872 a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72844 1 -    116970 a
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1817 1 +     27962 C
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1825 1 +      6077 C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1844 1 +      5971 C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1898 1 +      5932 C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                                82 1 -      4390 C
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389165 1 - 209938924 C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1846 1 +      5979 C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2212 1 -      4301 C
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236303 1 +   5703754 A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5893 1 +     21866 A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114057 1 +    313613 g
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22942 1 +     27374 A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26461 1 +     58920 A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12957 1 -     45317 A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20615 1 -     42441 A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23295 1 -     29113 A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26364 1 -     48123 A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46574 1 +     77746 T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856359 1 -   1910179 a
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866324 1 +   3870691 t
i Spermophilus_dauricus.KZ294078.1                       C 0 I 7
s Symphalangus_syndactylus.tarseq_199                       388579 1 +   1523678 A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11666 1 +     22964 a
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 681 1 +      5583 a
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tarsius_lariang.k141_1780720                                4922 1 +      6850 A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4963 1 +     20590 A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350819 1 - 186847797 A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22268 1 -     33621 A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17806 1 -     31044 a
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477710 1 -    610378 g
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18506 1 +     26378 A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31171 1 -     78344 A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17827 1 +     25722 A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26052 1 -     62838 A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26169 1 +     46913 A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6977 1 -     28527 A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27991 1 -     64340 A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26028 1 -     63452 A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7471 1 +     22490 A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          899 1 -      6147 A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7874 1 -     13050 a
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253113 1 -   6242583 a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58863 1 +     59866 A
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831898 1 -   4065304 A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6178 1 -     70247 g
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105281 1 -    105689 C
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Varecia_rubra.k141_787544                                  23222 1 -     30710 a
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22129 1 -    147434 a
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172096 1 -    224448 t
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 7
s Zapus_hudsonius.ZapHud_scaffold_230229                      1325 1 +      2695 A
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Zalophus_californianus.ZalCal_flattened_line_17732         26672 0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                103017 0 -    112863 C
e Ursus_maritimus.KK499267.1                                179856 0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              4505 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2509 0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        37293 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1449474 0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                196253 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11466664 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14352732 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         6277 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             23788 0 -     74585 C
e Lycaon_pictus.CM007581.1                                41612653 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        811267 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24913919 0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45105079 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41613498 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          220363 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     7020 0 -     23171 C
e CanFam4.chr16                                           42503384 0 +  60362399 C
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20413336 0 +  29979442 C
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tapirus_terrestris.TapTer_scaffold_755                    103329 0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      189373 0 +    199430 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122562 4 +    196729 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18096869 0 +  38429054 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12877 0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3970272 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18459552 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   22226 0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100609 1191 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215754 5 +  89631738 I
e Mungos_mungo.MunMun_flattened_line_18455                   16149 2 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  66881 2 +     83186 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28396 4 -    327341 I
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Glis_glis.GliGli_scaffold_33859                            31468 480 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 25402 4 -     30238 I
e Felis_catus_fca126.CM031415.1                          185114298 4 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              1892 4 +     87169 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810606 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3079  4 +     36723 T-----------------------------T-T--------------------A
s Acinonyx_jubatus.LLWD01001279.1                           810606  3 +   1699592 ------------------------------t-t--------------------t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413336  3 +  29979442 ------------------------------t-t--------------------t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15968 30 -     61208 T-GT-TGGAGTTTCTTG-TTAATATCTGTTT-T--------------------C
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45474  4 +     53615 t-----------------------------t-t--------------------a
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41414  4 +     44087 T-----------------------------T-T--------------------A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14054  4 -     21945 T-----------------------------T-T--------------------A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15730  4 +     32033 T-----------------------------T-T--------------------A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70183  4 -     84148 T-----------------------------T-T--------------------A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42416  4 -     78289 T-----------------------------T-T--------------------A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41862  4 +     55831 T-----------------------------T-T--------------------A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40304  4 -     64179 T-----------------------------T-T--------------------A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21950  4 -     24835 T-----------------------------T-T--------------------A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38933  4 +     45454 T-----------------------------T-T--------------------A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44631  4 +     70886 T-----------------------------G-T--------------------A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6756  4 +     30854 T-----------------------------T-T--------------------A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30895  4 +     42133 T-----------------------------T-T--------------------A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174679  4 -    412891 t-----------------------------t-t--------------------t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48705  4 -     65372 T-----------------------------T-T--------------------A
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42452  4 +     43593 T-----------------------------T-T--------------------A
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670465  4 +   5030052 T-----------------------------T-T--------------------A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22107  4 -     23494 T-----------------------------T-T--------------------A
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7243  4 +      8415 T-----------------------------T-T--------------------A
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14029  4 -     32367 t-----------------------------t-t--------------------c
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 7 C 0
s Arctocebus_calabarensis.k141_1364444                       18285  4 -     45910 G-----------------------------T-T--------------------T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2964  4 -     15198 t-----------------------------t-t--------------------t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272695  4 +  21539123 T-----------------------------T-T--------------------A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8862  4 +     48076 T-----------------------------T-T--------------------A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   3999  4 -     28759 T-----------------------------T-T--------------------A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31552  4 +     44353 T-----------------------------T-T--------------------A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46923  4 -     71267 T-----------------------------T-T--------------------A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20982  4 -     33135 T-----------------------------T-T--------------------A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4170  4 +     11645 g-----------------------------t-t--------------------t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4176  4 -     19611 g-----------------------------t-t--------------------t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5886  4 +     28062 T-----------------------------T-T--------------------A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41180  4 -     91139 T-----------------------------T-T--------------------A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18706  4 +     95584 T-----------------------------T-T--------------------A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18619  4 +    119600 T-----------------------------T-T--------------------A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8095  4 +     18648 T-----------------------------T-C--------------------A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7755  4 -     13885 T-----------------------------T-C--------------------A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16456  4 +     17162 T-----------------------------T-C--------------------A
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451411  4 + 189096842 T-----------------------------T-C--------------------A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17704  4 -     18408 T-----------------------------T-C--------------------A
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503384  3 +  60362399 ------------------------------t-t--------------------t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7020  3 -     23171 ------------------------------t-t--------------------t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220363  3 +   9314153 ------------------------------T-T--------------------T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613498  3 +  59632846 ------------------------------t-t--------------------t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105079  3 -  63665305 ------------------------------t-t--------------------t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268233  4 +    496798 T-----------------------------T-T--------------------T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3034  4 +      5315 t-----------------------------t-t--------------------t
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993933  4 +  23392119 t-----------------------------t-t--------------------t
i Cavia_aperea.AVPZ01000300.1                            C 0 I 26
s Cavia_porcellus.DS562891.1                               4997375  4 +  23407841 t-----------------------------t-t--------------------t
i Cavia_porcellus.DS562891.1                             C 0 I 26
s Cavia_tschudii.CavTsc_scaffold_23560                       60476  4 -     66877 T-----------------------------T-T--------------------T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 26
s Cebuella_niveiventris.k141_592277                           2988  4 -     12580 T-----------------------------T-C--------------------A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40874  4 +     53515 T-----------------------------T-C--------------------A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369084  4 -  26074798 T-----------------------------T-T--------------------A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5973  4 -     34880 T-----------------------------T-T--------------------A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65068  4 -     89041 T-----------------------------T-T--------------------A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1405  4 -      1636 T-----------------------------T-T--------------------T
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490142  4 -  27778364 t-----------------------------t-t--------------------t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16975  4 +     27315 t-----------------------------t-t--------------------t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138653  4 -   4669795 A-----------------------------T-T--------------------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42393  4 +     47900 A-----------------------------T-T--------------------A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42226  4 -     44860 A-----------------------------T-T--------------------A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42209  4 -    148725 A-----------------------------T-T--------------------A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25307  4 -     40656 T-----------------------------T-T--------------------A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5276  4 +     20796 T-----------------------------T-T--------------------A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9466  4 -     17524 T-----------------------------T-T--------------------A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25188  4 -     34525 T-----------------------------T-T--------------------A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9897  4 -     25376 T-----------------------------T-T--------------------A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362496  1 -  39242232 T-----------------------------------------------------
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268204  4 +  21565898 T-----------------------------T-T--------------------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29665  4 -     45857 T-----------------------------T-T--------------------A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25485  1 -     32606 T-----------------------------------------------------
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1638  4 +      8499 T-----------------------------T-T--------------------A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23157  4 +     70610 T-----------------------------T-T--------------------A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20082  4 +     36323 T-----------------------------T-T--------------------A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10796  4 -     19938 t-----------------------------t-t--------------------t
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28604  4 -     33796 G-----------------------------T-T--------------------T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3134  4 -     15404 g-----------------------------t-t--------------------t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6970  4 -     32913 T-----------------------------T-T--------------------A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17383  4 -     40346 T-----------------------------T-T--------------------A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17638  4 +    216457 T-----------------------------T-T--------------------A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17431  4 +     39636 T-----------------------------T-T--------------------A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1820  4 +      5346 T-----------------------------T-T--------------------A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40526  4 -    112038 T-----------------------------T-T--------------------A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6098  4 +     34062 T-----------------------------T-T--------------------A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340979  4 +  18827391 T-----------------------------T-T--------------------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7524  4 -     44032 T-----------------------------T-T--------------------A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302304  4 - 135778131 T-----------------------------T-T--------------------A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406739  4 -   2368649 T-----------------------------T-T--------------------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376615  4 - 200372422 t-----------------------------t-t--------------------a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                164  4 -     84244 t-----------------------------t-t--------------------a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805247  4 +  53390261 T-----------------------------T-T--------------------T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           734  4 -      8242 t-----------------------------t-t--------------------t
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40298  4 -     83289 T-----------------------------T-T--------------------T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 1
s Cricetulus_griseus.LT883664.1                          213112568  4 - 224834208 t-----------------------------t-t--------------------t
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1896  4 +     87169 ------------------------------t-t-t------------------t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 4 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642810  4 -   1526836 T-----------------------------T-T--------------------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   2961 12 +     50838 t-----------------------------a-ta---a--ga--ga-ga----c
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 39
s Cuniculus_paca.CunPac_flattened_line_7025                   1558  4 +     36344 T-----------------------------T-T--------------------T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 25
s Dasypus_novemcinctus.JH564415.1                          2108127  4 -   2246927 t-----------------------------t-t--------------------t
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290551  4 +  12879189 g-----------------------------t-t--------------------t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862701  4 -  20541912 t-----------------------------t-t--------------------t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662435  4 -   1390856 t-----------------------------t-t--------------------t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137219  4 -    198055 t-----------------------------t-t--------------------t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96437  4 -    115145 T-----------------------------T-T--------------------T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 26
s Dipodomys_ordii.KN672350.1                              18948345  4 -  37912305 t-----------------------------t-t--------------------t
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3292  4 -     10735 T-----------------------------T-T--------------------T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7879  4 +     14636 T-----------------------------T-T--------------------T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 26
s Echinops_telfairi.JH980293.1                            62851905  4 - 111700974 t-----------------------------t-c--------------------a
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4268  4 +     19438 t-----------------------------t-t--------------------t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105438  4 -  10337057 T-----------------------------T-T--------------------T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28509  4 +    110024 t-----------------------------a-t--------------------t
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01026522.1                           10489  4 +     18970 t-----------------------------a-t--------------------t
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               24913919  2 +  41312741 ------------------------------t-t---------------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576335  4 +  14770903 t-----------------------------t-t--------------------t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039417  4 -   4378816 t-----------------------------t-t--------------------t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373351  4 +  39960074 t-----------------------------t-t--------------------t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410137  4 -    498745 t-----------------------------t-t--------------------t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260502  4 +  21539334 T-----------------------------T-T--------------------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12706  4 -     24895 g-----------------------------t-t--------------------t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40418  4 -     70999 g-----------------------------t-t--------------------t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84377  4 +    112731 g-----------------------------t-t--------------------t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40950  4 +     68309 g-----------------------------t-t--------------------t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51275  4 -     65740 G-----------------------------T-T--------------------T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21905  4 -     75513 G-----------------------------T-T--------------------T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46098  4 -     97555 G-----------------------------T-T--------------------T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2825  4 +     30972 g-----------------------------t-t--------------------t
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40548  4 -     52037 g-----------------------------t-t--------------------t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56949  4 -    111500 g-----------------------------t-t--------------------t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244516  3 - 206538554 ------------------------------t-t--------------------t
i Felis_catus.CM001381.2                                 I 4 C 0
s Felis_catus_fca126.CM031415.1                          185114302  3 - 205367284 ------------------------------t-t--------------------t
i Felis_catus_fca126.CM031415.1                          I 4 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25406  3 -     30238 ------------------------------t-t--------------------t
i Felis_nigripes.FelNig_flattened_line_31944             I 4 C 0
s Galago_moholi.ctg3793                                     122295  4 -    137831 g-----------------------------t-t--------------------t
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5835  4 +     22493 g-----------------------------t-t--------------------t
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17877  4 -     32986 g-----------------------------t-t--------------------t
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17041  4 +     18121 t-----------------------------G-T--------------------T
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31948  1 -     36801 -----------------------------------------------------C
i Glis_glis.GliGli_scaffold_33859                        I 480 C 0
s Gorilla_beringei.k141_3358147                               3416  4 -      8343 T-----------------------------T-T--------------------A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252427  4 - 186649187 t-----------------------------t-t--------------------a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12634  4 -     40692 g-----------------------------t-t--------------------t
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34035  4 +     49394 g-----------------------------t-t--------------------t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58904  4 -     66874 g-----------------------------t-t--------------------t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7777  4 -     42923 g-----------------------------t-t--------------------t
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14777  4 -     53142 g-----------------------------t-t--------------------t
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28400  3 -    327341 ------------------------------t-t--------------------t
i Helogale_parvula.HelPar_flattened_line_2585            I 4 C 0
s Heterocephalus_glaber.JH602082.1                         1925020  4 -  22651954 t-----------------------------t-t--------------------t
i Heterocephalus_glaber.JH602082.1                       C 0 I 26
s Hipposideros_armiger.JXIK01000431.1                      1548181  4 -   1711038 t-----------------------------t-t--------------------t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47497  4 +     49977 t-----------------------------t-t--------------------t
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140420  4 -    630532 T-----------------------------T-T--------------------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66883  3 +     83186 ------------------------------T-T--------------------T
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 2 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69346  4 +    143317 T-----------------------------T-T--------------------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 26
s Hylobates_agilis.k141_1155965                               3455  4 +     12352 T-----------------------------T-T--------------------A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10638  4 +     55766 T-----------------------------T-T--------------------A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050234  4 + 191637585 T-----------------------------T-T--------------------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799112  4 +  11177569 T-----------------------------T-T--------------------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384763  5 +   7955117 t----------------------------tt-t--------------------c
i Ictidomys_tridecemlineatus.JH393364.1                  I 7 C 0
s Indri_indri.k141_2415743                                     290  4 +     11955 G-----------------------------T-T--------------------T
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237151 29 +   9596543 T-GT-TGAAGTTTCTGG-TTAATA-tcattt-c--------------------c
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41238  4 +    110728 T-----------------------------T-T--------------------A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59809  4 -     65777 t-----------------------------t-t--------------------t
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757425  4 +  30322482 g-----------------------------t-t--------------------t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1907  4 -     13097 T-----------------------------T-T--------------------A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1858  4 +      5940 T-----------------------------T-T--------------------A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1489  4 -      5717 T-----------------------------T-T--------------------A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8104  4 -     11567 T-----------------------------T-C--------------------A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9485  4 -     12945 T-----------------------------T-C--------------------A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6960  4 +     29618 G-----------------------------T-T--------------------T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6957  4 +     31569 G-----------------------------T-T--------------------T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6967  4 +     24756 g-----------------------------t-t--------------------t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6961  4 +     16388 G-----------------------------T-T--------------------T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811267  3 -   3914936 ------------------------------t-t--------------------t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     15870  4 +     24238 t-----------------------------a-t--------------------t
i Lepus_americanus.LepAme_scaffold_56121                 I 810 C 0
s Lophocebus_aterrimus.ctg367                               330606  4 -   1826925 A-----------------------------T-T--------------------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8074  4 +     19643 G-----------------------------T-T--------------------T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041734  4 -   6120653 G-----------------------------T-T--------------------T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078250  4 +  43346337 t-----------------------------t-t--------------------t
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41612653  3 +  59628241 ------------------------------t-t--------------------t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42923  4 -     61512 A-----------------------------T-T--------------------A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370584  4 -  60120075 A-----------------------------T-T--------------------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22839  4 +     30207 A-----------------------------T-T--------------------A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19942  4 -     24934 A-----------------------------T-T--------------------A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22791  4 +     30527 A-----------------------------T-T--------------------A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33981  4 -     50087 A-----------------------------T-T--------------------A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43752  4 +     51645 A-----------------------------T-T--------------------A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412920  4 - 187317192 A-----------------------------T-T--------------------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397143  4 +  25927173 A-----------------------------T-T--------------------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46307  4 -     62418 A-----------------------------T-T--------------------A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22962  4 +     24253 A-----------------------------T-T--------------------A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42783  4 +     59329 A-----------------------------T-T--------------------A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268716  4 +    668171 A-----------------------------T-T--------------------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19897  4 +     21031 A-----------------------------T-T--------------------A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  494  4 +     17132 A-----------------------------T-T--------------------A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221233  4 -    270270 t-----------------------------t-t--------------------t
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319994  4 +  24302211 A-----------------------------T-T--------------------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354826  4 -    752769 A-----------------------------T-T--------------------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671517  4 -    737560 t-----------------------------t-t--------------------t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218810  4 +    317179 t-----------------------------t-t--------------------t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498972  5 +  40650429 t----------------------------tt-t--------------------c
i Marmota_marmota.CZRN01000018.1                         I 7 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148436  4 +    207569 t-----------------------------t-t--------------------t
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23788  2 -     74585 ------------------------------t-t---------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46678  4 -    140813 T-----------------------------T-T--------------------T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 1
s Mesocricetus_auratus.KB708134.1                         17427130  4 +  29670104 t-----------------------------t-t--------------------t
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mico_argentatus.k141_582562                                 7867  4 +     17804 T-----------------------------T-C--------------------A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8651  4 -     12984 T-----------------------------T-C--------------------A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16602  4 -     26561 T-----------------------------T-C--------------------A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982572  4 +  93316391 G-----------------------------T-T--------------------T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    42992  4 +    145209 t-----------------------------t-a--------------------a
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182649  4 +    200668 t-----------------------------t-t--------------------t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360750  4 -   8254450 t-----------------------------t-t--------------------t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39651  4 -     48117 T-----------------------------T-T--------------------T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20021  4 -     27822 T-----------------------------T-T--------------------A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6277  3 +     27589 ------------------------------t-t--------------------t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50363  4 -     62432 g-----------------------------t-t--------------------t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176833  4 +    366855 T-----------------------------T-T--------------------T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16151  3 -     63510 ------------------------------t-t--------------------t
i Mungos_mungo.MunMun_flattened_line_18455               I 2 C 0
s Murina_feae.MurFea_scaffold_17764                          36679  4 +     47283 t-----------------------------t-t--------------------t
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    491  4 +      5579 t-----------------------------a-t--------------------t
i Mus_caroli.FMAL02030609.1                              I 16 I 1
s Mus_musculus.chr8                                       41682418  4 + 129401213 t-----------------------------a-t--------------------t
i Mus_musculus.chr8                                      C 0 I 1
s Mus_spretus.CM004101.1                                  39490012  4 + 130317789 t-----------------------------a-t--------------------t
i Mus_spretus.CM004101.1                                 C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_12866             80519  4 -     86153 C-----------------------------C-T--------------------C
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 7 C 0
s Mustela_putorius.JH418006.1                             14352732  2 +  14710649 ------------------------------t-t---------------------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790723  4 +  10118263 t-----------------------------t-t--------------------t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385085  4 +   6019432 t-----------------------------t-t--------------------t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380905  4 +   4330536 t-----------------------------t-t--------------------t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3464  4 +      3929 t-----------------------------t-t--------------------t
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117564  5 +    130748 t-----------------------------ttt--------------------t
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26602  4 +     34575 T-----------------------------T-T--------------------A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466664  3 -  31847680 ------------------------------t-t--------------------t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125627  4 -    149072 T-----------------------------T-T--------------------T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51344  4 -    132029 T-----------------------------T-T--------------------A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7439  4 -     16345 T-----------------------------T-T--------------------A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13324  4 +     22201 T-----------------------------T-T--------------------A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411608  4 -  22158432 T-----------------------------T-T--------------------A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23722  4 -     54323 T-----------------------------T-T--------------------A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196253  3 +   9404916 ------------------------------t-t--------------------t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634042  4 + 196305487 G-----------------------------T-T--------------------T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              800  4 -      3937 G-----------------------------T-T--------------------T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562292  4 - 199412804 G-----------------------------T-T--------------------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11045311 24 -  11899542 t-----------------------------c-tatctatctatctatcatctgc
i Octodon_degus.JH651603.1                               C 0 I 173
s Odobenus_rosmarus.KB229312.1                             1449474  3 +   2017862 ------------------------------t-t--------------------t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90237 27 -    140218 TAGAATATA-TATAT-G-T-A-TATATAT-T-T--------------------T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_2487                   105073  4 +    107918 T-----------------------------T-T--------------------T
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_171931              11357  4 -     14239 t-----------------------------t-t--------------------t
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37293  3 +    559221 ------------------------------t-t--------------------t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37416  4 -     51505 g-----------------------------t-t--------------------t
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350430  4 +   1103335 G-----------------------------T-T--------------------T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470432  4 - 189151597 T-----------------------------T-T--------------------A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22226  3 -    230217 ------------------------------t-t--------------------t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459552  3 -  18783137 ------------------------------t-t--------------------t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970272  3 +   8748460 ------------------------------t-t--------------------t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240834  4 - 183742232 A-----------------------------T-T--------------------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7298  4 +     21308 A-----------------------------T-T--------------------A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288337  4 -  20919399 A-----------------------------T-T--------------------A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19953  4 -     27687 A-----------------------------T-T--------------------A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13089  4 +     16796 A-----------------------------T-T--------------------A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19899  4 -     23640 A-----------------------------T-T--------------------A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12877  3 +     78924 ------------------------------t-t--------------------t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23727  4 +     31479 G-----------------------------T-T--------------------T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16085  4 -     24908 G-----------------------------T-T--------------------T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37546  4 +     38305 T-----------------------------T-T--------------------T
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244718  4 +  18517816 t-----------------------------t-t--------------------t
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1
s Petromus_typicus.PetTyp_scaffold_17301                     29941  4 -     56120 T-----------------------------T-T--------------------T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 24
s Piliocolobus_badius.k141_2495623                            6753  4 +      7560 T-----------------------------T-T--------------------A
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62461  4 -     63152 T-----------------------------T-T--------------------A
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            45060  4 +     45295 T-----------------------------T-T--------------------A
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2738  4 +      5735 T-----------------------------T-T--------------------A
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              856  4 +     22231 t-----------------------------t-t--------------------t
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62873  4 +    207309 T-----------------------------T-T--------------------A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3969  4 -     25401 T-----------------------------T-T--------------------A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29708  4 +     58159 T-----------------------------T-T--------------------A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29984  4 +     63561 T-----------------------------T-T--------------------A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29747  4 +     51148 T-----------------------------T-T--------------------A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554716  4 -   4542175 T-----------------------------T-T--------------------A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29731  4 +     51125 T-----------------------------T-T--------------------A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6140  4 +     39866 T-----------------------------T-T--------------------A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1225  4 -      9282 T-----------------------------T-T--------------------A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40629  4 -     87950 T-----------------------------T-T--------------------A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41022  4 -     88961 T-----------------------------T-T--------------------A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5721  4 -     39403 T-----------------------------T-T--------------------A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40673  4 +     87928 T-----------------------------T-T--------------------A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5718  4 -     60166 T-----------------------------T-T--------------------A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12654  4 -     67232 T-----------------------------T-T--------------------A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40570  4 -     90634 T-----------------------------T-T--------------------A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42038  4 +     89403 T-----------------------------T-T--------------------A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175572  4 - 189387572 T-----------------------------T-T--------------------A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190390  4 -   9816681 T-----------------------------T-T--------------------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25216  4 +     69807 T-----------------------------T-T--------------------A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42411  4 -     80239 t-----------------------------t-t--------------------a
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980581  4 +   4620579 G-----------------------------T-T--------------------T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564049  4 -   2598838 G-----------------------------T-T--------------------T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1685  4 -      7103 g-----------------------------t-t--------------------t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2282  4 -     11706 g-----------------------------t-t--------------------t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6018  4 -     30655 g-----------------------------t-t--------------------t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32343  4 +     46564 g-----------------------------t-t--------------------t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92614  4 -     98465 g-----------------------------t-t--------------------t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6251  4 +     35169 g-----------------------------t-t--------------------t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34216  4 +     52041 t-----------------------------t-t--------------------t
i Psammomys_obesus.NESX01036366.1                        C 0 I 1
s Pteronotus_parnellii.KE847780.1                            49893  4 -     66298 t-----------------------------t-t--------------------t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2509  2 -     18639 ------------------------------t-t---------------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838862  4 -  28871421 t-----------------------------t-t--------------------t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535427  4 -   4952924 t-----------------------------t-t--------------------t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096869  3 +  38429054 ------------------------------t-t--------------------t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24626  4 +     91421 T-----------------------------T-T--------------------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151119  4 -   7812017 T-----------------------------T-T--------------------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5496  4 +     72585 T-----------------------------T-T--------------------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020506  4 -  90668790 t-----------------------------a-t--------------------t
i Rattus_norvegicus.chr16                                C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                       2911528  4 +   3329780 t-----------------------------t-t--------------------t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26436  4 +     27361 t-----------------------------t-t--------------------a
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119803  4 + 195417433 T-----------------------------T-T--------------------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234044  4 -   7961872 t-----------------------------t-t--------------------a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72845  4 -    116970 t-----------------------------t-t--------------------t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1818  4 +     27962 T-----------------------------T-T--------------------A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1826  4 +      6077 T-----------------------------T-T--------------------A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1845  4 +      5971 T-----------------------------T-T--------------------A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1899  4 +      5932 T-----------------------------T-T--------------------A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                                83  4 -      4390 T-----------------------------T-T--------------------A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389166  4 - 209938924 T-----------------------------T-T--------------------A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1847  4 +      5979 T-----------------------------T-T--------------------A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2213  4 -      4301 T-----------------------------T-T--------------------A
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236304  4 +   5703754 T-----------------------------T-T--------------------A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5894  4 +     21866 T-----------------------------T-T--------------------A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114058  4 +    313613 t-----------------------------t-t--------------------t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22943  4 +     27374 T-----------------------------T-T--------------------A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26462  4 +     58920 T-----------------------------T-T--------------------A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12958  4 -     45317 T-----------------------------T-T--------------------A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20616  4 -     42441 T-----------------------------T-T--------------------A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23296  4 -     29113 T-----------------------------T-T--------------------A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26365  4 -     48123 T-----------------------------T-T--------------------A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46575  4 +     77746 T-----------------------------T-T--------------------T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126            1856360  4 -   1910179 t-----------------------------t-t--------------------t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 2
s Spermophilus_dauricus.KZ294078.1                         1866332  5 +   3870691 t----------------------------tt-t--------------------c
i Spermophilus_dauricus.KZ294078.1                       I 7 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4505  2 -     97271 ------------------------------t-t---------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122566  3 +    196729 ------------------------------t-t--------------------t
i Suricata_suricatta.SurSur_flattened_line_6629          I 4 C 0
s Symphalangus_syndactylus.tarseq_199                       388580  4 +   1523678 T-----------------------------T-T--------------------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11667  4 +     22964 t-----------------------------t-t--------------------t
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 682  5 +      5583 t-----------------------------ttt--------------------t
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tarsius_lariang.k141_1780720                                4923  4 +      6850 T-----------------------------T-T--------------------T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4964  4 +     20590 T-----------------------------T-T--------------------T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350820  4 - 186847797 A-----------------------------T-T--------------------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22269  4 -     33621 T-----------------------------T-T--------------------T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 26
s Tolypeutes_matacus.TolMat_scaffold_31955                   17807  4 -     31044 t-----------------------------t-t--------------------t
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477711  4 -    610378 t-----------------------------t-t--------------------t
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18507  4 +     26378 T-----------------------------T-T--------------------A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31172  4 -     78344 T-----------------------------T-T--------------------A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17828  4 +     25722 T-----------------------------T-T--------------------A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26053  4 -     62838 T-----------------------------T-T--------------------A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26170  4 +     46913 T-----------------------------T-T--------------------A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6978  4 -     28527 T-----------------------------T-T--------------------A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27992  4 -     64340 T-----------------------------T-T--------------------A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26029  4 -     63452 T-----------------------------T-T--------------------A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7472  4 +     22490 T-----------------------------T-T--------------------A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          900  4 -      6147 T-----------------------------T-T--------------------A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7875  4 -     13050 t-----------------------------t-t--------------------a
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253114  4 -   6242583 t-----------------------------t-t--------------------a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58864  4 +     59866 T-----------------------------T-T--------------------A
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831899  4 -   4065304 T-----------------------------T-G--------------------T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6179  4 -     70247 t-----------------------------t-g--------------------t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105282  4 -    105689 T-----------------------------T-T--------------------T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179856  3 +   5085361 ------------------------------t-t--------------------t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23223  4 -     30710 g-----------------------------t-t--------------------t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22130  4 -    147434 g-----------------------------t-t--------------------t
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103017  3 -    112863 ------------------------------t-t--------------------t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172104  4 -    224448 t-----------------------------t-t--------------------c
i Xerus_inauris.XerIna_scaffold_2302                     I 7 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26672  3 -     86975 ------------------------------t-t--------------------t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1326 28 +      2695 T-GT-TGGAATTTCT-GATTAATATCTGTTT-----------------------
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tapirus_terrestris.TapTer_scaffold_755                    103329  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      189373  0 +    199430 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100609 1191 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_90206                   11071 178 +     11903 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3083 1 +     36723 C
s Acinonyx_jubatus.LLWD01001279.1                           810609 1 +   1699592 t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413339 1 +  29979442 t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15998 1 -     61208 T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45478 1 +     53615 c
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41418 1 +     44087 C
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14058 1 -     21945 C
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15734 1 +     32033 C
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70187 1 -     84148 C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42420 1 -     78289 C
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41866 1 +     55831 C
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40308 1 -     64179 C
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21954 1 -     24835 C
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38937 1 +     45454 C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44635 1 +     70886 C
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6760 1 +     30854 C
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30899 1 +     42133 C
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174683 1 -    412891 c
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48709 1 -     65372 C
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42456 1 +     43593 C
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670469 1 +   5030052 C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22111 1 -     23494 C
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7247 1 +      8415 C
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14033 1 -     32367 t
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18289 1 -     45910 C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2968 1 -     15198 c
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272699 1 +  21539123 C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8866 1 +     48076 C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4003 1 -     28759 C
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31556 1 +     44353 C
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46927 1 -     71267 C
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20986 1 -     33135 C
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4174 1 +     11645 c
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4180 1 -     19611 c
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5890 1 +     28062 C
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41184 1 -     91139 C
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18710 1 +     95584 C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18623 1 +    119600 C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8099 1 +     18648 C
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7759 1 -     13885 C
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16460 1 +     17162 C
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451415 1 + 189096842 C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17708 1 -     18408 C
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503387 1 +  60362399 t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7023 1 -     23171 t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220366 1 +   9314153 T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613501 1 +  59632846 t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105082 1 -  63665305 t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268237 1 +    496798 C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3038 1 +      5315 c
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993963 1 +  23392119 t
i Cavia_aperea.AVPZ01000300.1                            I 26 C 0
s Cavia_porcellus.DS562891.1                               4997405 1 +  23407841 t
i Cavia_porcellus.DS562891.1                             I 26 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60506 1 -     66877 T
i Cavia_tschudii.CavTsc_scaffold_23560                   I 26 C 0
s Cebuella_niveiventris.k141_592277                           2992 1 -     12580 C
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40878 1 +     53515 C
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369088 1 -  26074798 C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5977 1 -     34880 C
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65072 1 -     89041 C
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1409 1 -      1636 C
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490146 1 -  27778364 c
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16979 1 +     27315 c
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138657 1 -   4669795 G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42397 1 +     47900 G
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42230 1 -     44860 G
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42213 1 -    148725 G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25311 1 -     40656 C
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5280 1 +     20796 C
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9470 1 -     17524 C
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25192 1 -     34525 T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9901 1 -     25376 C
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_mona.ctg39                                  268208 1 +  21565898 C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29669 1 -     45857 C
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1642 1 +      8499 C
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23161 1 +     70610 C
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20086 1 +     36323 C
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10800 1 -     19938 c
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28608 1 -     33796 C
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3138 1 -     15404 c
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6974 1 -     32913 C
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17387 1 -     40346 C
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17642 1 +    216457 C
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17435 1 +     39636 C
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1824 1 +      5346 C
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40530 1 -    112038 C
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6102 1 +     34062 C
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340983 1 +  18827391 C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7528 1 -     44032 C
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302308 1 - 135778131 C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406743 1 -   2368649 C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376619 1 - 200372422 c
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                168 1 -     84244 c
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805251 1 +  53390261 C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           738 1 -      8242 t
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40303 1 -     83289 T
i Cricetomys_gambianus.CriGam_scaffold_14425             I 1 C 0
s Cricetulus_griseus.LT883664.1                          213112573 1 - 224834208 t
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1900 1 +     87169 t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642814 1 -   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3012 1 +     50838 T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 39 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1587 1 +     36344 T
i Cuniculus_paca.CunPac_flattened_line_7025              I 25 C 0
s Dasypus_novemcinctus.JH564415.1                          2108131 1 -   2246927 c
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290555 1 +  12879189 c
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862705 1 -  20541912 g
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662439 1 -   1390856 c
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137223 1 -    198055 c
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96467 1 -    115145 T
i Dinomys_branickii.DinBra_scaffold_10381                I 26 C 0
s Dipodomys_ordii.KN672350.1                              18948349 1 -  37912305 t
i Dipodomys_ordii.KN672350.1                             C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_89095                   3296 1 -     10735 T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_80628                  7909 1 +     14636 T
i Dolichotis_patagonum.DolPat_scaffold_80628             I 26 C 0
s Echinops_telfairi.JH980293.1                            62851909 1 - 111700974 c
i Echinops_telfairi.JH980293.1                           C 0 I 10
s Eidolon_helvum.AWHC01266696.1                               4272 1 +     19438 c
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105442 1 -  10337057 T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28514 1 +    110024 a
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01026522.1                           10494 1 +     18970 a
i Ellobius_talpinus.LOJH01026522.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               24913921 1 +  41312741 t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576339 1 +  14770903 c
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039421 1 -   4378816 c
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373355 1 +  39960074 c
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410141 1 -    498745 c
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260506 1 +  21539334 C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12710 1 -     24895 c
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40422 1 -     70999 c
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84381 1 +    112731 c
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40954 1 +     68309 c
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51279 1 -     65740 C
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21909 1 -     75513 C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46102 1 -     97555 C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2829 1 +     30972 c
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40552 1 -     52037 c
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56953 1 -    111500 c
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244519 1 - 206538554 c
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114305 1 - 205367284 t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25409 1 -     30238 t
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122299 1 -    137831 c
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5839 1 +     22493 c
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17881 1 -     32986 c
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17045 1 +     18121 T
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               3420 1 -      8343 C
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252431 1 - 186649187 c
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11249 1 +     11903 A
i Graphiurus_murinus.GraMur_scaffold_90206               I 178 C 0
s Hapalemur_alaotrensis.k141_330369                          12638 1 -     40692 c
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34039 1 +     49394 c
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58908 1 -     66874 c
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7781 1 -     42923 c
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14781 1 -     53142 c
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28403 1 -    327341 t
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925050 1 -  22651954 t
i Heterocephalus_glaber.JH602082.1                       I 26 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548185 1 -   1711038 c
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47501 1 +     49977 c
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140424 1 -    630532 C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66886 1 +     83186 T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69376 1 +    143317 T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 26 C 0
s Hylobates_agilis.k141_1155965                               3459 1 +     12352 C
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10642 1 +     55766 C
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050238 1 + 191637585 C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799116 1 +  11177569 C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384768 1 +   7955117 t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     294 1 +     11955 C
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237180 1 +   9596543 t
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41242 1 +    110728 C
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59813 1 -     65777 c
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757429 1 +  30322482 c
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1911 1 -     13097 C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1862 1 +      5940 C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1493 1 -      5717 C
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8108 1 -     11567 C
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9489 1 -     12945 C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6964 1 +     29618 C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6961 1 +     31569 C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6971 1 +     24756 c
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6965 1 +     16388 C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811270 1 -   3914936 t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     15874 1 +     24238 t
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330610 1 -   1826925 G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8078 1 +     19643 C
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5041738 1 -   6120653 C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078254 1 +  43346337 c
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41612656 1 +  59628241 t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42927 1 -     61512 G
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370588 1 -  60120075 G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22843 1 +     30207 G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19946 1 -     24934 G
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22795 1 +     30527 G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33985 1 -     50087 G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43756 1 +     51645 G
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412924 1 - 187317192 G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397147 1 +  25927173 G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46311 1 -     62418 G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22966 1 +     24253 G
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42787 1 +     59329 G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268720 1 +    668171 G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19901 1 +     21031 G
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  498 1 +     17132 G
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221237 1 -    270270 c
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319998 1 +  24302211 G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354830 1 -    752769 G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671521 1 -    737560 c
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218814 1 +    317179 c
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498977 1 +  40650429 t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148440 1 +    207569 c
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23790 1 -     74585 t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46683 1 -    140813 T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 C 0
s Mesocricetus_auratus.KB708134.1                         17427135 1 +  29670104 t
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mico_argentatus.k141_582562                                 7871 1 +     17804 C
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8655 1 -     12984 C
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16606 1 -     26561 G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982576 1 +  93316391 C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    42996 1 +    145209 c
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 10
s Micronycteris_hirsuta.MicHir_scaffold_2233                182653 1 +    200668 c
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360754 1 -   8254450 t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39655 1 -     48117 T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20025 1 -     27822 A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6280 1 +     27589 t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50367 1 -     62432 c
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176837 1 +    366855 C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16154 1 -     63510 t
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36683 1 +     47283 c
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                    496 1 +      5579 a
i Mus_caroli.FMAL02030609.1                              I 1 I 61
s Mus_musculus.chr8                                       41682423 1 + 129401213 a
i Mus_musculus.chr8                                      I 1 I 200
s Mus_spretus.CM004101.1                                  39490017 1 + 130317789 a
i Mus_spretus.CM004101.1                                 I 1 I 1556
s Muscardinus_avellanarius.MusAve_scaffold_12866             80523 1 -     86153 A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14352734 1 +  14710649 t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790727 1 +  10118263 c
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385089 1 +   6019432 c
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380909 1 +   4330536 c
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3468 1 +      3929 c
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117569 1 +    130748 c
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26606 1 +     34575 C
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466667 1 -  31847680 t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125631 1 -    149072 C
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51348 1 -    132029 C
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7443 1 -     16345 C
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13328 1 +     22201 C
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411612 1 -  22158432 C
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23726 1 -     54323 C
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196256 1 +   9404916 c
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634046 1 + 196305487 C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              804 1 -      3937 C
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562296 1 - 199412804 C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11045508 1 -  11899542 T
i Octodon_degus.JH651603.1                               I 173 C 0
s Odobenus_rosmarus.KB229312.1                             1449477 1 +   2017862 t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90265 1 -    140218 A
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105078 1 +    107918 T
i Onychomys_torridus.OnyTor_scaffold_2487                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11361 1 -     14239 c
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37296 1 +    559221 t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37420 1 -     51505 c
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350434 1 +   1103335 C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470436 1 - 189151597 C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22229 1 -    230217 t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459555 1 -  18783137 t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970275 1 +   8748460 t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240838 1 - 183742232 G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7302 1 +     21308 G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288341 1 -  20919399 G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19957 1 -     27687 G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13093 1 +     16796 G
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19903 1 -     23640 G
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12880 1 +     78924 t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23731 1 +     31479 C
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16089 1 -     24908 C
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37550 1 +     38305 T
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244723 1 +  18517816 t
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29969 1 -     56120 T
i Petromus_typicus.PetTyp_scaffold_17301                 I 24 C 0
s Piliocolobus_badius.k141_2495623                            6757 1 +      7560 C
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62465 1 -     63152 C
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            45064 1 +     45295 C
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2742 1 +      5735 C
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              860 1 +     22231 c
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62877 1 +    207309 C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3973 1 -     25401 C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29712 1 +     58159 C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29988 1 +     63561 C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29751 1 +     51148 C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554720 1 -   4542175 C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29735 1 +     51125 C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6144 1 +     39866 C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1229 1 -      9282 C
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40633 1 -     87950 C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41026 1 -     88961 C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5725 1 -     39403 C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40677 1 +     87928 C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5722 1 -     60166 C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12658 1 -     67232 C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40574 1 -     90634 C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42042 1 +     89403 C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175576 1 - 189387572 C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190394 1 -   9816681 C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25220 1 +     69807 C
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42415 1 -     80239 c
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980585 1 +   4620579 C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564053 1 -   2598838 C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1689 1 -      7103 c
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2286 1 -     11706 c
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6022 1 -     30655 c
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32347 1 +     46564 c
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92618 1 -     98465 c
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6255 1 +     35169 c
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34221 1 +     52041 t
i Psammomys_obesus.NESX01036366.1                        I 1 C 0
s Pteronotus_parnellii.KE847780.1                            49897 1 -     66298 t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2511 1 -     18639 t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838866 1 -  28871421 c
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535431 1 -   4952924 c
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096872 1 +  38429054 t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24630 1 +     91421 C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151123 1 -   7812017 C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5500 1 +     72585 C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020511 1 -  90668790 t
i Rattus_norvegicus.chr16                                I 1 I 147
s Rhinolophus_sinicus.LVEH01000134.1                       2911532 1 +   3329780 c
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26440 1 +     27361 c
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119807 1 + 195417433 C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234048 1 -   7961872 c
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72849 1 -    116970 c
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1822 1 +     27962 C
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1830 1 +      6077 C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1849 1 +      5971 C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1903 1 +      5932 C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                                87 1 -      4390 C
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389170 1 - 209938924 C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1851 1 +      5979 C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2217 1 -      4301 C
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236308 1 +   5703754 C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5898 1 +     21866 C
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114062 1 +    313613 g
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22947 1 +     27374 C
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26466 1 +     58920 C
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12962 1 -     45317 C
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20620 1 -     42441 C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23300 1 -     29113 C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26369 1 -     48123 C
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46580 1 +     77746 T
i Sigmodon_hispidus.SigHis_scaffold_20193                I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856366 1 -   1910179 c
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 C 0
s Spermophilus_dauricus.KZ294078.1                         1866337 1 +   3870691 t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4507 1 -     97271 t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122569 1 +    196729 t
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388584 1 +   1523678 C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11671 1 +     22964 c
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 687 1 +      5583 c
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tarsius_lariang.k141_1780720                                4927 1 +      6850 C
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4968 1 +     20590 C
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350824 1 - 186847797 G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22299 1 -     33621 T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 26 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17811 1 -     31044 c
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477715 1 -    610378 c
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18511 1 +     26378 C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31176 1 -     78344 C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17832 1 +     25722 C
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26057 1 -     62838 C
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26174 1 +     46913 C
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6982 1 -     28527 C
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27996 1 -     64340 C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26033 1 -     63452 C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7476 1 +     22490 C
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          904 1 -      6147 C
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7879 1 -     13050 c
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253118 1 -   6242583 c
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58868 1 +     59866 C
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831903 1 -   4065304 C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6183 1 -     70247 c
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105286 1 -    105689 C
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179859 1 +   5085361 t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23227 1 -     30710 c
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22134 1 -    147434 c
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103020 1 -    112863 t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172108 1 -    224448 t
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26675 1 -     86975 t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1354 1 +      2695 T
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tapirus_terrestris.TapTer_scaffold_755                    103329 0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      189373 0 +    199430 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100609 1191 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2566781 17500 -   3988456 T
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215754 5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Glis_glis.GliGli_scaffold_33859                            31949 0 -     36801 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cercopithecus_nictitans.k141_2995370                       25486 0 -     32606 C
e Cercopithecus_albogularis.ctg5                                  362497 0 -  39242232 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3084 18 +     36723 TCCT------AG-------T-TCA-A-CTTA-A-----AA
s Acinonyx_jubatus.LLWD01001279.1                           810610 18 +   1699592 tcct------ag-------t-ttt-g-ctgg-a-----aa
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413340 18 +  29979442 tcct------ag-------t-ttt-g-ctga-a-----aa
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    15999 17 -     61208 C-TT------AG-------T-TTT-G-CTTT-A-----AA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45479 18 +     53615 tcct------ag-------t-ttg-g-cttc-a-----aa
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41419 18 +     44087 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14059 18 -     21945 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15735 18 +     32033 TCCT------AG-------T-TTG-A-CTTC-A-----AA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70188 18 -     84148 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42421 18 -     78289 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41867 18 +     55831 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40309 18 -     64179 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21955 18 -     24835 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38938 18 +     45454 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44636 18 +     70886 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6761 18 +     30854 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30900 18 +     42133 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174684 18 -    412891 tcct------ag-------t-ttt-g-ctta-a-----aa
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48710 18 -     65372 TCCT------AG-------T-TTT-G-CTTA-C-----AA
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42457 18 +     43593 TCCT------AG-------T-TTT-G-CTTA-C-----AA
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670470 18 +   5030052 TCCT------AG-------T-TTT-G-CTTA-C-----AA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22112 18 -     23494 TCCT------AG-------T-TTT-G-CTTA-C-----AA
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7248 18 +      8415 TCCT------AG-------T-TTT-G-CTTA-C-----AA
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14034 17 -     32367 c-ct------ag-------a-ttt-g-ctga-a-----aa
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18290 18 -     45910 CCCT------AG-------T-TTT-G-CTGA-C-----AA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2969 18 -     15198 tcct------ag-------t-ttt-g-ctta-g-----aa
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272700 18 +  21539123 CCCT------AG-------T-TTT-G-CTTA-A-----AA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8867 18 +     48076 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4004 18 -     28759 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31557 18 +     44353 CCCT------AG-------T-TTT-G-CTTA-A-----AA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46928 18 -     71267 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                20987 18 -     33135 CCCT------AG-------T-TTT-G-CTTA-A-----AA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4175 18 +     11645 tcct------ag-------a-ttt-g-ctga-c-----aa
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4181 18 -     19611 tcct------ag-------a-ttt-g-ctga-c-----aa
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5891 18 +     28062 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41185 18 -     91139 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18711 18 +     95584 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18624 18 +    119600 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8100 18 +     18648 TCCT------AC-------T-TTT-G-CTTT-C-----AA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7760 19 -     13885 TCCT------AC-------T-TTT-GGCTTA-C-----AA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16461 18 +     17162 TCCT------AC-------T-TTT-G-CTTT-C-----AA
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451416 18 + 189096842 TCCT------AC-------T-TTT-G-CTTT-C-----AA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17709 18 -     18408 TCCT------AC-------T-TTT-G-CTTT-C-----AA
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503388 18 +  60362399 ccct------aa-------t-ttt-g-ctga-a-----aa
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7024 18 -     23171 ccct------aa-------t-ttt-g-ctga-a-----aa
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220367 18 +   9314153 CCCT------AA-------T-TTT-G-CTGA-A-----aa
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613502 18 +  59632846 ccct------aa-------t-ttt-g-ctga-a-----aa
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105083 18 -  63665305 ccct------aa-------t-ttt-g-ctga-a-----aa
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268238 18 +    496798 TCCT------AG-------T-TTT-A-CTAA-A-----AA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3039 18 +      5315 tcct------ag-------t-ttt-g-ctta-a-----aa
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4993964 14 +  23392119 g-ct------ag-------t-ttt-g-ctga---------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997406 14 +  23407841 g-ct------ag-------t-ttt-g-ctga---------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60507 14 -     66877 G-CT------AG-------T-TTT-G-CTGA---------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           2993 18 -     12580 TCCT------AC-------T-TTT-G-CTTT-C-----AA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40879 18 +     53515 TCCT------AC-------T-TTT-G-CTTT-C-----AA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369089 18 -  26074798 TCCT------AG-------T-TTT-G-CTTA-C-----AA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5978 18 -     34880 TCCT------AG-------T-TTT-G-CTTA-C-----AA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65073 18 -     89041 TCCT------AG-------T-TTT-G-CTTA-C-----AA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1410 18 -      1636 TCCT------AG-------T-TTT-A-CTAA-A-----AA
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490147 18 -  27778364 tcct------aa-------t-ttt-g-ctga-a-----aa
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16980 18 +     27315 tcct------aa-------t-ttt-g-ctga-a-----aa
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138658 18 -   4669795 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42398 18 +     47900 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42231 18 -     44860 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42214 18 -    148725 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25312 18 -     40656 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5281 18 +     20796 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9471 18 -     17524 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25193 18 -     34525 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9902 18 -     25376 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362497 18 -  39242232 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268209 18 +  21565898 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29670 18 -     45857 TCGT------AG-------T-TTG-G-CTTC-A-----AA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25486 18 -     32606 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1643 18 +      8499 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23162 18 +     70610 TCAT------AG-------T-TTG-G-CTTC-A-----AA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20087 18 +     36323 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10801 18 -     19938 tcct------ag-------a-ttt-g-ttaa-a-----aa
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28609 18 -     33796 TCCT------AG-------T-TTT-G-CTGA-C-----AA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3139 18 -     15404 tcct------ag-------t-ttt-g-ctga-c-----aa
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6975 18 -     32913 TCCT------CG-------T-TTT-G-CTTA-A-----AA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17388 18 -     40346 TCCT------CG-------T-TTT-G-CTTA-A-----AA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17643 18 +    216457 TCCT------CG-------T-TTT-G-CTTA-A-----AA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17436 18 +     39636 TCCT------CG-------T-TTT-G-CTTA-A-----AA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1825 18 +      5346 CCCT------AG-------T-TTT-G-CTTA-C-----AA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40531 18 -    112038 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6103 18 +     34062 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                340984 18 +  18827391 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7529 18 -     44032 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302309 18 - 135778131 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406744 18 -   2368649 TCCT------AG-------T-TTG-G-CTTA-A-----AA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376620 18 - 200372422 tcct------ag-------t-ttg-g-ctta-a-----aa
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                169 18 -     84244 tcct------ag-------t-ttg-g-ctta-a-----aa
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805252 18 +  53390261 TCCT------CA-------A-CTt-g-ctga-a-----at
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           739  9 -      8242 tcct------ag-------t-tt-----------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 7
s Cricetomys_gambianus.CriGam_scaffold_14425                 40304 17 -     83289 T-TT------AG-------C-TTT-T-TGGA-A-----AA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112574 17 - 224834208 t-tt------gg-------t-ttt-g-tgga-a-----aa
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1901 18 +     87169 tcct------ag-------t-ttt-g-ctga-a-----aa
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642815 17 -   1526836 T-TA------AG-------C-TTT-G-CTGA-A-----AA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3013 14 +     50838 G-TG------AG-------G-TTT-T-CTGA---------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1588 14 +     36344 G-CT------AG-------T-TTT-G-CTGA---------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108132 18 -   2246927 tcct------ag-------a-att-g-ttaa-a-----aa
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290556 18 +  12879189 tcct------ag-------t-ttt-g-ccaa-c-----aa
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862706 18 -  20541912 tcct------ag-------t-ttt-g-ttta-a-----aa
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662440 18 -   1390856 tcct------aa-------t-ttt-g-ctga-a-----aa
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137224 18 -    198055 tcct------aa-------t-ttt-g-ctga-a-----aa
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96468 14 -    115145 G-CT------AG-------T-TTT-G-CTGA---------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948351 17 -  37912305 t-cc------ag-------t-ttt-g-ctga-a-----aa
i Dipodomys_ordii.KN672350.1                             I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3298 17 -     10735 T-CC------AG-------T-TTT-G-CTGA-A-----AA
i Dipodomys_stephensi.DipSte_scaffold_89095              I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7910 14 +     14636 G-CT------AG-------T-TTT-G-CTGA---------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851920 13 - 111700974 ---------------------------ctcaaatagacaa
i Echinops_telfairi.JH980293.1                           I 10 C 0
s Eidolon_helvum.AWHC01266696.1                               4273 18 +     19438 tcct------tg-------t-ttt-g-ctta-a-----aa
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105443 12 -  10337057 CATC----TACA-------T-TTT----------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 7
s Ellobius_lutescens.LOEQ01008920.1                          28515 17 +    110024 t-tt------at-------t-ttt-g-agga-a-----aa
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10495 17 +     18970 t-tt------at-------t-ttt-g-agga-a-----aa
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913922 18 +  41312741 tcct------ag-------t-ctt-g-ctga-a-----ga
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576340 18 +  14770903 tcct------ag-------t-ttt-g-ccta-a-----aa
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039422 18 -   4378816 tcct------aa-------t-ttt-g-ctaa-a-----aa
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373356 18 +  39960074 tcct------aa-------t-ttt-g-ctaa-a-----aa
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410142 18 -    498745 tcct------aa-------t-ttt-g-ctaa-a-----aa
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260507 18 +  21539334 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12711 18 -     24895 tcct------ag-------t-ttt-g-ctga-c-----aa
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40423 18 -     70999 tcct------ag-------t-ttt-g-ctga-c-----aa
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84382 18 +    112731 tcct------ag-------t-ttt-g-ctga-c-----aa
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40955 18 +     68309 tcct------ag-------t-ttt-g-ctga-c-----aa
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51280 18 -     65740 TCCT------AG-------T-TTT-G-CTGA-C-----AA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21910 18 -     75513 TCCT------AG-------T-TTT-G-CTGA-C-----AA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46103 18 -     97555 TCCT------AG-------T-TTT-G-CTGA-C-----AA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2830 18 +     30972 tcct------ag-------t-ttt-g-ctga-c-----aa
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40553 18 -     52037 tcct------ag-------t-ttt-g-ctga-c-----aa
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56954 18 -    111500 tcct------ag-------t-ttt-g-ctga-c-----aa
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244520 18 - 206538554 tcct------ag-------t-ttt-g-ctgg-a-----aa
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114306 18 - 205367284 tcct------aG-------T-TTT-G-CTGG-A-----aa
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25410 18 -     30238 tcct------ag-------t-ttt-g-ctgg-a-----aa
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122300 18 -    137831 ccct------ag-------t-ttc-a-ctga-c-----aa
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5840 18 +     22493 ccct------ag-------t-ttc-a-ctga-c-----aa
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17882 18 -     32986 ccct------ag-------t-ttc-a-ctga-c-----aa
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17046 18 +     18121 TCTT------AG-------T-TTT-G-CTGG-A-----AA
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Gorilla_beringei.k141_3358147                               3421 18 -      8343 TCCT------AG-------T-TCG-A-CTTA-A-----AA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252432 18 - 186649187 tcct------ag-------t-tcg-a-ctta-a-----aa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11250 17 +     11903 C-CT------AG-------T-TTT-T-CTGA-A-----AA
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12639 18 -     40692 tcct------ag-------t-ttt-g-ctga-c-----aa
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34040 18 +     49394 tcct------ag-------t-ttt-g-ctga-c-----aa
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58909 18 -     66874 tcct------ag-------t-ttt-g-ctga-c-----aa
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7782 18 -     42923 tcct------ag-------t-ttt-g-ctga-c-----aa
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14782 18 -     53142 tcct------ag-------t-ttt-g-ctga-c-----aa
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28404 18 -    327341 tcct------ac-------t-ttt-g-ctga-a-----aa
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925051 14 -  22651954 c-at------ag-------t-ttt-g-ctta---------
i Heterocephalus_glaber.JH602082.1                       C 0 I 7
s Hipposideros_armiger.JXIK01000431.1                      1548186 18 -   1711038 tcct------ag-------t-ttt-g-ctta-a-----aa
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47502 18 +     49977 tcct------ag-------t-ttt-g-ctta-a-----aa
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140425 18 -    630532 TCCT------AG-------T-CTG-G-CTTA-A-----AA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66887 18 +     83186 TCCC------AG-------T-TTT-G-CTGA-A-----AA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69377 14 +    143317 G-CT------AG-------T-TTT-G-CTCA---------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3460 18 +     12352 TCCT------AG-------T-CTG-G-CTTA-A-----AA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10643 18 +     55766 TCCT------AG-------T-CTG-G-CTTA-A-----AA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050239 18 + 191637585 TCCT------AG-------T-CTG-G-CTTA-A-----AA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799117 18 +  11177569 TCCT------AG-------T-CTG-G-CTTA-A-----AA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384769 17 +   7955117 c-ct------aa-------a-ttt-g-ctga-a-----aa
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     295 18 +     11955 TCCT------AG-------A-TTT-G-CTGA-C-----AA
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237181 18 +   9596543 t-tt------ag-------t-ttttg-cATT-A-----AA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41243 18 +    110728 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59814 18 -     65777 tcct------ag-------t-ttt-g-ccta-a-----aa
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757430 18 +  30322482 tcct------ag-------t-ttt-g-ctga-c-----aa
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1912 18 -     13097 CCCT------AG-------T-TTT-G-CTTA-C-----AA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1863 18 +      5940 CCCT------AG-------T-TTT-G-CTTA-C-----AA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1494 18 -      5717 CCCT------AG-------T-TTT-G-CTTA-C-----AA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8109 18 -     11567 TCCT------AC-------T-TTT-G-CTTA-C-----AA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9490 18 -     12945 TCCT------AC-------T-TTT-G-CTTA-C-----AA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6965 18 +     29618 TTCT------AG-------T-TTT-G-CTGA-C-----AA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6962 18 +     31569 TTCT------AG-------T-TTT-G-CTGA-C-----AA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6972 18 +     24756 tcct------ag-------t-ttt-g-ctga-c-----aa
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6966 18 +     16388 TTCT------AG-------T-TTT-G-CTGA-C-----AA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811271 18 -   3914936 tcct------ag-------t-ttt-g-ctga-a-----ac
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     15875 24 +     24238 g-tt------tcctccaagt-ttt-g-ctga-a-----ca
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330611 18 -   1826925 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8079 14 +     19643 CCCT------AG-------T-TTT-G-CTg----------
i Loris_lydekkerianus.k141_2031736                       C 0 I 281
s Loris_tardigradus.ctg83                                  5041739 14 -   6120653 CCCT------AG-------T-TTT-G-CTg----------
i Loris_tardigradus.ctg83                                C 0 I 282
s Loxodonta_africana.GL010049.1                           39078255 11 +  43346337 tcct------ag-------ttttt----------------
i Loxodonta_africana.GL010049.1                          C 0 I 7
s Lycaon_pictus.CM007581.1                                41612657 18 +  59628241 ccct------aa-------t-ttt-g-ctga-a-----aa
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42928 18 -     61512 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370589 18 -  60120075 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22844 18 +     30207 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19947 18 -     24934 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22796 18 +     30527 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 33986 18 -     50087 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43757 18 +     51645 TCCT------AG-------T-TTG-A-CTTC-A-----AA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412925 18 - 187317192 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397148 18 +  25927173 TCCT------AG-------T-TTG-G-CTTC-A-----Aa
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46312 18 -     62418 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22967 18 +     24253 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42788 18 +     59329 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268721 18 +    668171 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19902 18 +     21031 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  499 18 +     17132 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221238 18 -    270270 tcct------ag-------t-ttt-g-ctta-a-----aa
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        319999 18 +  24302211 TCCT------AG-------T-TTG-G-CTTC-A-----CA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354831 18 -    752769 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671522 18 -    737560 cctt------ag-------t-ttt-g-ttga-a-----aa
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218815 18 +    317179 cctt------ag-------t-ttt-g-ttga-a-----aa
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7498978 17 +  40650429 c-CT------AG-------A-ttt-g-ctga-a-----ag
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148441 18 +    207569 tcct------ag-------t-ttt-g-ctta-a-----aa
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23791 18 -     74585 ccct------ag-------t-ctt-g-ctga-a-----ga
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46684 17 -    140813 T-TT------TA-------T-TTT-G-TGGA-A-----AA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427136 17 +  29670104 t-tt------gg-------t-ttt-g-tgga-a-----aa
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 7872 18 +     17804 TCCT------AC-------T-TTT-G-CTTT-C-----AA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8656 18 -     12984 TCCT------AC-------T-TTT-G-CTTT-C-----AA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16607 18 -     26561 TCCT------AC-------T-TTT-G-CTTT-C-----AA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982577 18 +  93316391 TCCT------AG-------T-TTT-G-CTGA-C-----AA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43007 12 +    145209 ---------------------------ctca-atagccaa
i Microgale_talazaci.MicTal_scaffold_6613                I 10 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182654 18 +    200668 tcct------ag-------t-ttt-g-ctta-a-----aa
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360755 18 -   8254450 tcct------ag-------t-ttt-g-ccta-a-----aa
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39656 18 -     48117 TCCT------AG-------T-TTT-G-CCTA-A-----AA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20026 18 -     27822 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6281 18 +     27589 tcct------ag-------t-ttt-g-ctga-a-----ac
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50368 18 -     62432 tcct------ag-------t-ttt-g-ctga-c-----aa
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176838 18 +    366855 TCCT------AG-------T-TTT-G-CTTA-A-----AA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16155 18 -     63510 tcct------ac-------t-ttt-g-ctga-a-----aa
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36684 18 +     47283 tcct------ag-------t-ttt-g-tcta-a-----aa
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_musculus.chr8                                       41682624 16 + 129401213 --ta------ta-------t-ata-g-tgga-a-----aa
i Mus_musculus.chr8                                      I 200 C 0
s Mus_spretus.CM004101.1                                  39491574 16 + 130317789 --ta------ta-------t-ata-g-tgga-a-----aa
i Mus_spretus.CM004101.1                                 I 1556 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80524 17 -     86153 C-CT------AG-------T-TTT-T-CTGA-A-----AA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14352735 18 +  14710649 tcct------ag-------t-ctt-g-ctga-a-----ga
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790728 18 +  10118263 tcct------ag-------t-ttt-g-ccta-a-----aa
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385090 18 +   6019432 tcct------ag-------t-ttt-g-ccta-a-----aa
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380910 18 +   4330536 tcct------ag-------t-ttt-g-ccta-a-----aa
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3469 18 +      3929 tcct------ag-------t-ttt-g-ccta-a-----aa
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117570 17 +    130748 t-cc------ag-------a-ttt-g-ctaa-a-----aa
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26607 18 +     34575 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466668 18 -  31847680 tcct------ag-------t-ttt-g-ctga-a-----ac
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125632 18 -    149072 TCCT------AC-------T-TTT-G-CTTA-A-----AA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51349 18 -    132029 TCCT------AG-------T-CTG-G-CTTA-A-----AA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7444 18 -     16345 TCCT------AG-------T-CTG-G-CTTA-A-----AA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13329 18 +     22201 TCCT------AG-------T-CTG-G-CTTA-A-----AA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411613 18 -  22158432 TCCT------AG-------T-CTG-G-CTTA-A-----AA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23727 18 -     54323 TCCT------AG-------T-CTG-G-CTTA-A-----AA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196257 19 +   9404916 ccct------aa-t-----t-ttt-g-ctga-a-----aa
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634047 18 + 196305487 CCCT------AG-------T-TTT-G-CTGA-C-----AA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              805 18 -      3937 CCCT------AG-------T-TTT-G-CTGA-C-----AA
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562297 18 - 199412804 CCCT------AG-------T-TTT-G-CTGA-C-----AA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549281 12 -   3988456 -------------------N-NNN-N-NNNN-N-----NN
i Ochotona_princeps.JH802162.1                           T 17500 C 0
s Octodon_degus.JH651603.1                                11045509 14 -  11899542 G-TG------AG-------T-TTT-G-atga---------
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449478 18 +   2017862 tcct------ag-------t-ttt-g-ctga-a-----ac
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90266 17 -    140218 C-TT------GT-------T-TTT-G-AGAA-A-----AA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105079 17 +    107918 T-TT------AG-------T-TTT-G-TAGA-A-----AA
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11362 10 -     14239 ccct------ta-------t-ttt----------------
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 7
s Otocyon_megalotis.JAEUCK010005147.1                        37297 18 +    559221 ccct------ag-------t-ttt-g-ctga-a-----aa
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37421 18 -     51505 ccct------ag-------t-ttc-a-ctga-c-----aa
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350435 18 +   1103335 CCCT------AG-------T-TTC-A-CTGA-C-----aa
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470437 18 - 189151597 TCCT------AG-------T-TCG-A-Ctta-a-----aa
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22230 18 -    230217 tcct------ag-------t-ttt-g-ctgg-a-----aa
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459556 18 -  18783137 tcct------ag-------t-ttt-g-ctgg-a-----aa
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970276 18 +   8748460 tcct------ag-------t-ttt-g-ctgg-a-----aa
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240839 18 - 183742232 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7303 18 +     21308 TGCT------AG-------T-TTG-G-CTTC-A-----AA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288342 18 -  20919399 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19958 18 -     27687 TGCT------AG-------T-TTG-G-CTTC-A-----AA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13094 18 +     16796 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19904 18 -     23640 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12881 18 +     78924 tcct------ag-------t-ttt-g-ctga-a-----aa
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          23732 18 +     31479 CCCT------AG-------T-TTT-G-CTGA-C-----AA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16090 18 -     24908 CCCT------AG-------T-TTT-G-CTGA-C-----AA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37551 17 +     38305 C-CT------AG-------T-TTT-G-CTGA-A-----AA
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244724 17 +  18517816 t-tt------ag-------t-ttt-g-taga-a-----aa
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29970 14 -     56120 G-CT------AG-------T-TTT-A-CTGA---------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 7
s Piliocolobus_badius.k141_2495623                            6758 18 +      7560 TCCT------AG-------T-TTG-G-CTTA-A-----AA
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62466 18 -     63152 TCCT------AG-------T-TTG-G-CTTA-A-----AA
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            45065 18 +     45295 TCCT------AG-------T-TTG-G-CTTA-A-----AA
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2743 18 +      5735 TCCT------AG-------T-TTG-G-CTTA-A-----AA
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              861 18 +     22231 tcct------ag-------t-ttt-g-ccta-a-----aa
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62878 18 +    207309 TCCT------AG-------T-TTT-G-CTTA-A-----CA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3974 18 -     25401 TCCT------AG-------T-TTT-G-CTTA-A-----CA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29713 18 +     58159 TCCT------AG-------T-TTT-G-CTTA-A-----CA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         29989 18 +     63561 TCCT------AG-------T-TTT-G-CTTA-A-----CA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29752 18 +     51148 TCCT------AG-------T-TTT-G-CTTA-A-----CA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554721 18 -   4542175 TCCT------AA-------T-TTT-C-CTTA-A-----CA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29736 18 +     51125 TCCT------AG-------T-TTT-G-CTTA-A-----CA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6145 18 +     39866 TCCT------CG-------T-TTT-G-CTTA-A-----AA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1230 18 -      9282 TCCT------CG-------T-TTT-G-CTTA-A-----AA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40634 18 -     87950 TCCT------CG-------T-TTT-G-CTTA-A-----AA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41027 18 -     88961 TCCT------CG-------T-TTT-G-CTTA-A-----AA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5726 18 -     39403 TCCT------CT-------T-TTT-G-CTTA-A-----AA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40678 18 +     87928 TCCT------CA-------C-TTT-G-CTTA-A-----AA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5723 18 -     60166 TCCT------CG-------T-TTT-G-CTTA-A-----AA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12659 18 -     67232 TCCT------CG-------T-TTT-G-CTTA-A-----AA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40575 18 -     90634 TCCT------CG-------T-TTT-G-CTTA-A-----AA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42043 18 +     89403 TCCT------CG-------T-TTT-G-CTTA-A-----AA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175577 18 - 189387572 TCCT------AG-------T-TTG-G-Ctta-a-----aa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190395 18 -   9816681 TCCT------AG-------T-TTG-G-CTTA-A-----AA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25221 18 +     69807 TCCT------AG-------T-TTC-G-CTTA-A-----CA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42416 18 -     80239 tcct------ag-------t-ttc-g-ctta-a-----ca
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980586 18 +   4620579 TCCT------AG-------T-TTT-G-CTGA-C-----AA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564054 18 -   2598838 TCCT------AG-------A-TTT-G-CTGA-C-----AA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1690 18 -      7103 tcct------ag-------a-ttt-g-ctga-c-----aa
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2287 18 -     11706 tcct------ag-------a-ttt-g-ctga-c-----aa
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6023 18 -     30655 tcct------ag-------a-ttt-g-ctga-c-----aa
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32348 18 +     46564 tcct------ag-------a-ttt-g-ctga-c-----aa
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92619 18 -     98465 tcct------ag-------a-ttt-g-ctga-c-----aa
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6256 18 +     35169 tcct------ag-------a-ttt-g-ctga-c-----aa
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34222 17 +     52041 t-tt------ta-------t-ttt-g-tgga-a-----aa
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49898 18 -     66298 tcct------ag-------t-ttt-g-ctta-a-----aa
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2512 17 -     18639 tcct------ag-------t--tt-g-ctga-a-----ga
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838867 18 -  28871421 tcct------ag-------t-ttt-g-ctta-a-----aa
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535432 18 -   4952924 tcct------ag-------t-ttt-g-ctta-a-----aa
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18096873 18 +  38429054 tcct------ag-------t-ttt-g-ctgg-a-----aa
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24631 18 +     91421 TCCT------AG-------G-TTA-G-CTTA-A-----AA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151124 18 -   7812017 TCCT------AG-------G-TTA-G-CTTA-A-----AA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5501 18 +     72585 TCCT------AG-------G-TTA-G-CTTA-A-----AA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020659 22 -  90668790 --tatatacata-------t-ata-c-taga-A-----AA
i Rattus_norvegicus.chr16                                I 147 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911533 18 +   3329780 tcct------ag-------t-ttt-g-ttta-a-----aa
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26441 18 +     27361 tcct------ag-------t-tta-g-ctta-a-----aa
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119808 18 + 195417433 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234049 18 -   7961872 tcct------ag-------t-tta-g-ctta-a-----aa
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72850 18 -    116970 tcct------ag-------t-ttt-g-ctta-a-----aa
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1823 18 +     27962 CCCT------AG-------T-TTT-G-CTTA-C-----AA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1831 18 +      6077 CCCT------AG-------T-TTT-G-CTTA-C-----AA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1850 18 +      5971 CCCT------AG-------T-TTT-G-CTTA-C-----AA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1904 18 +      5932 CCCT------AG-------T-TTT-G-CTTA-C-----AA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                                88 18 -      4390 CCCT------AG-------T-TTT-G-CTTA-C-----AA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389171 18 - 209938924 CCCT------AG-------T-TTT-G-CTTA-C-----AA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1852 18 +      5979 CCCT------AG-------T-TTT-G-CTTA-C-----AA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2218 18 -      4301 CCCT------AG-------T-TTT-G-CTTA-C-----AA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236309 18 +   5703754 TCCT------AG-------T-TTT-G-CTTA-C-----AA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5899 18 +     21866 TCCT------AG-------T-TTT-G-CTTA-C-----AA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114063 18 +    313613 tctt------ca-------t-ttt-g-ctaa-a-----aa
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22948 18 +     27374 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26467 18 +     58920 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12963 18 -     45317 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20621 18 -     42441 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23301 18 -     29113 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26370 18 -     48123 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46581 17 +     77746 C-TT------AC-------T-TTT-G-TGAC-A-----AA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856367 18 -   1910179 ccct------aa-------t-ttt-g-ctga-a-----aa
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866338 17 +   3870691 c-CT------Aa-------g-ttt-g-ctga-a-----aa
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4508 18 -     97271 tcct------ag-------t-ctt-g-ctga-a-----ga
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122570 18 +    196729 tcct------ac-------t-ttt-g-ctga-a-----aa
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388585 18 +   1523678 TCCT------AG-------T-CTG-G-CTTA-A-----AA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11672 18 +     22964 gcct------ag-------t-ttt-g-ccta-a-----aa
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 688 18 +      5583 tcct------ag-------a-ttt-g-ctaa-a-----aa
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189373 17 +    199430 ---tt-t---tt-------t-ttt-g-gtga-g-----ga
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 229
s Tapirus_terrestris.TapTer_scaffold_755                    103329 15 -    539355 ---t------tt-------t-ttt-g-gtga-g-----ga
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 229
s Tarsius_lariang.k141_1780720                                4928 18 +      6850 TTCT------AG-------C-TTT-A-CTAA-A-----AA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4969 18 +     20590 TTCT------AG-------C-TTT-A-CTAA-A-----AA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350825 18 - 186847797 TCCT------AG-------T-TTG-G-CTTC-A-----AA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22300 14 -     33621 G-CT------AG-------T-TTT-G-CTGA---------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 7
s Tolypeutes_matacus.TolMat_scaffold_31955                   17812 18 -     31044 tcct------ag-------a-ttt-g-ctaa-a-----aa
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477716 18 -    610378 tctt------ag-------t-ttt-g-ctta-a-----aa
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18512 18 +     26378 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31177 18 -     78344 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17833 18 +     25722 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26058 18 -     62838 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26175 18 +     46913 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          6983 18 -     28527 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      27997 18 -     64340 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26034 18 -     63452 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7477 18 +     22490 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          905 18 -      6147 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7880 18 -     13050 tcct------ag-------t-tta-g-ctta-a-----aa
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253119 18 -   6242583 tcct------ag-------t-tta-g-ctta-a-----aa
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58869 18 +     59866 TCCT------AG-------T-TTA-G-CTTA-A-----AA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831904 16 -   4065304 TCCT------AG-------T-TTT-G-ctga-a-------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6184 16 -     70247 tcct------ag-------t-ttt-g-ctga-a-------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105287 18 -    105689 TCCT------GC-------T-ATG-G-TTGA-A-----AG
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179860 18 +   5085361 tcct------ag-------t-ttt-g-ctga-a-----aa
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23228 18 -     30710 tcct------ag-------t-ttt-g-ctga-c-----aa
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22135 18 -    147434 tcct------ag-------t-ttt-g-ctga-c-----aa
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103021 18 -    112863 ccca------aa-------t-ttt-g-ctga-a-----aa
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172109 17 -    224448 c-tt------ag-------a-ttt-g-ctga-a-----aa
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26676 18 -     86975 tcct------ag-------t-ttc-g-ctga-a-----ac
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1355 17 +      2695 C-TC------AG-------T-TTT-T-CTTT-A-----GA
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100609 1191 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Mus_caroli.FMAL02030609.1                                    497 61 +      5579 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Glis_glis.GliGli_scaffold_33859                            31949  0 -     36801 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3102 4 +     36723 TGAA
s Acinonyx_jubatus.LLWD01001279.1                           810628 4 +   1699592 tgga
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 219
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413358 4 +  29979442 tgga
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 8
s Allactaga_bullata.AllBul_scaffold_20030                    16016 4 -     61208 TGTA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45497 4 +     53615 tgga
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41437 4 +     44087 TGGA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14077 4 -     21945 TGGA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15753 4 +     32033 TGGA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70206 4 -     84148 TGGA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42439 4 -     78289 TGGA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41885 4 +     55831 TGGA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40327 4 -     64179 TGGA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21973 4 -     24835 TGGA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38956 4 +     45454 TGGA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44654 4 +     70886 TGGA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6779 4 +     30854 TGGA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30918 4 +     42133 TGGA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174702 3 -    412891 tgg-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 7
s Aotus_azarae.k141_118258                                   48728 4 -     65372 TGGA
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42475 4 +     43593 TGGA
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670488 4 +   5030052 tgga
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22130 4 -     23494 TGGA
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7266 4 +      8415 TGGA
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14051 2 -     32367 --aa
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18308 4 -     45910 TGAA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2987 4 -     15198 tggc
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 7
s Ateles_geoffroyi_b.tarseq_1536                               272718 4 +  21539123 TGGA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8885 4 +     48076 TGGA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4022 4 -     28759 TGGA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31575 4 +     44353 TGGA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46946 4 -     71267 TGGA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21005 4 -     33135 TGGA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4193 4 +     11645 tgga
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4199 4 -     19611 tgga
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5909 4 +     28062 TGGA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41203 4 -     91139 TGGA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18729 4 +     95584 TGGA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18642 4 +    119600 TGGA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8118 4 +     18648 TGGA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7779 4 -     13885 TGAA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16479 4 +     17162 TGGA
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451434 4 + 189096842 TGGA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17727 4 -     18408 TGGA
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503406 4 +  60362399 tggt
i CanFam4.chr16                                          C 0 I 8
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7042 4 -     23171 tggt
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 8
s Canis_lupus_dingo.QKWQ01000480.1                          220385 4 +   9314153 tggt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 8
s Canis_lupus_familiaris.chr16                            41613520 4 +  59632846 tggt
i Canis_lupus_familiaris.chr16                           C 0 I 8
s Canis_lupus_orion.HG994398.1                            45105101 4 -  63665305 tggt
i Canis_lupus_orion.HG994398.1                           C 0 I 8
s Carlito_syrichta.NW_007259797.1                           268256 4 +    496798 TGGa
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3057 4 +      5315 tgga
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 7
s Cebuella_niveiventris.k141_592277                           3011 4 -     12580 TGGA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40897 4 +     53515 TGGA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369107 4 -  26074798 TGGA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                5996 4 -     34880 TGGA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65091 4 -     89041 TGGA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1428 4 -      1636 TGGA
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490165 4 -  27778364 tgga
i Ceratotherium_simum.JH767749.1                         C 0 I 7
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          16998 4 +     27315 tgga
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 7
s Cercocebus_atys.KQ010504.1                                138676 4 -   4669795 tgga
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42416 4 +     47900 TGGA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42249 4 -     44860 TGGA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42232 4 -    148725 TGGA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25330 4 -     40656 TGGA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5299 4 +     20796 TGGA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9489 4 -     17524 TGGA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25211 4 -     34525 TGGA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9920 4 -     25376 TGGA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362515 4 -  39242232 TGGA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268227 4 +  21565898 TGGA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29688 4 -     45857 TGGA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25504 4 -     32606 TGGA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1661 4 +      8499 TGGA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23180 4 +     70610 TGGA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20105 4 +     36323 TGGA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10819 4 -     19938 tgga
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28627 4 -     33796 TGGA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3157 4 -     15404 tgga
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             6993 4 -     32913 TGGA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17406 4 -     40346 TGGA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17661 4 +    216457 TGGA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17454 4 +     39636 TGGA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1843 4 +      5346 GGGA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40549 4 -    112038 TGGA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6121 4 +     34062 TGGA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341002 4 +  18827391 TGGA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7547 4 -     44032 TGGA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302327 4 - 135778131 TGGA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406762 4 -   2368649 TGga
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376638 4 - 200372422 tgga
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                187 4 -     84244 tgga
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805270 4 +  53390261 tata
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           755 4 -      8242 tgga
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 7 I 7
s Cricetomys_gambianus.CriGam_scaffold_14425                 40321 4 -     83289 TAAA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112591 4 - 224834208 taaa
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              1919 4 +     87169 tgga
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 223
s Ctenodactylus_gundi.CteGun_scaffold_65                    642832 4 -   1526836 TGAA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108150 4 -   2246927 tgga
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290574 4 +  12879189 tgga
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862724 4 -  20541912 tgga
i Desmodus_rotundus.KZ672289.1                           C 0 I 7
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662458 4 -   1390856 tgga
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 7
s Diceros_bicornis.DicBicMic_scaffold_5955                  137242 4 -    198055 tgga
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 7
s Dipodomys_ordii.KN672350.1                              18948368 4 -  37912305 caga
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3315 4 -     10735 CAGA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62851933 4 - 111700974 cgga
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4291 4 +     19438 tgga
i Eidolon_helvum.AWHC01266696.1                          C 0 I 7
s Elephantulus_edwardii.JH947257.1                         9105462 4 -  10337057 Tgga
i Elephantulus_edwardii.JH947257.1                       I 7 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28532 4 +    110024 taaa
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10512 4 +     18970 taaa
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913940 4 +  41312741 taga
i Enhydra_lutris.KZ291758.1                              C 0 I 8
s Eptesicus_fuscus.JH977646.1                             12576358 4 +  14770903 taga
i Eptesicus_fuscus.JH977646.1                            C 0 I 7
s Equus_asinus.JREZ01000139.1                              3039440 4 -   4378816 tgga
i Equus_asinus.JREZ01000139.1                            C 0 I 7
s Equus_caballus.CM000403.2                               21373374 4 +  39960074 tgga
i Equus_caballus.CM000403.2                              C 0 I 7
s Equus_przewalskii.KK951119.1                              410160 4 -    498745 tgga
i Equus_przewalskii.KK951119.1                           C 0 I 7
s Erythrocebus_patas.Contig38                               260525 4 +  21539334 TGGA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12729 4 -     24895 tgga
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40441 4 -     70999 tgga
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84400 4 +    112731 tgga
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40973 4 +     68309 tgga
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51298 4 -     65740 TGGA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21928 4 -     75513 TGGA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46121 4 -     97555 TGGA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2848 4 +     30972 tgga
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40571 4 -     52037 tgga
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56972 4 -    111500 tgga
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244538 4 - 206538554 tgga
i Felis_catus.CM001381.2                                 C 0 I 219
s Felis_catus_fca126.CM031415.1                          185114324 4 - 205367284 tgga
i Felis_catus_fca126.CM031415.1                          C 0 I 219
s Felis_nigripes.FelNig_flattened_line_31944                 25428 4 -     30238 tgga
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 219
s Galago_moholi.ctg3793                                     122318 4 -    137831 tgaa
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             5858 4 +     22493 tgaa
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            17900 4 -     32986 tgaa
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17064 4 +     18121 TGGA
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31949 4 -     36801 TGGA
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3439 4 -      8343 TGAA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252450 4 - 186649187 tgaa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11267 4 +     11903 TGGA
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12657 4 -     40692 tgga
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34058 4 +     49394 tgga
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58927 4 -     66874 tgga
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7800 4 -     42923 tgga
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14800 4 -     53142 tgga
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28422 4 -    327341 tgga
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 217
s Hipposideros_armiger.JXIK01000431.1                      1548204 4 -   1711038 tgga
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 7
s Hipposideros_galeritus.HipGal_scaffold_23202               47520 4 +     49977 tgga
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 7
s Hoolock_leuconedys.ctg274                                    140443 4 -    630532 TGAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  66905 4 +     83186 TGGA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 216
s Hylobates_agilis.k141_1155965                               3478 4 +     12352 TGAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10661 4 +     55766 TGAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050257 4 + 191637585 TGAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799135 4 +  11177569 TGAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384786 4 +   7955117 aaaa
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     313 4 +     11955 TGGA
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237199 4 +   9596543 tggt
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41261 4 +    110728 TGGA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59832 4 -     65777 tgca
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 11
s Lemur_catta.scaffold_24                                 14757448 4 +  30322482 tgga
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1930 4 -     13097 GGGA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1881 4 +      5940 GGGA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1512 4 -      5717 GGGA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8127 4 -     11567 TGGA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9508 4 -     12945 TGGA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6983 4 +     29618 TGGA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              6980 4 +     31569 TGGA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          6990 4 +     24756 tgga
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       6984 4 +     16388 TGGA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811289 4 -   3914936 tgga
i Leptonychotes_weddellii.KB714746.1                     C 0 I 8
s Lepus_americanus.LepAme_scaffold_56121                     15899 4 +     24238 tggg
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330629 4 -   1826925 TGGA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39078273 4 +  43346337 tgga
i Loxodonta_africana.GL010049.1                          I 7 C 0
s Lycaon_pictus.CM007581.1                                41612675 4 +  59628241 tggt
i Lycaon_pictus.CM007581.1                               C 0 I 8
s Macaca_arctoides.k141_1757516                              42946 4 -     61512 TGGA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370607 4 -  60120075 TGGA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22862 4 +     30207 TGGA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19965 4 -     24934 TGGA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22814 4 +     30527 TGGA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34004 4 -     50087 TGGA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43775 4 +     51645 TGGA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412943 4 - 187317192 tgga
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397166 4 +  25927173 tgta
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46330 4 -     62418 TGGA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22985 4 +     24253 TGGA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42806 4 +     59329 TGGA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268739 4 +    668171 TGGA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19920 4 +     21031 TGGA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  517 4 +     17132 TGGA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221256 4 -    270270 tgga
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 7
s Mandrillus_leucophaeus.scaffold280                        320017 4 +  24302211 TGGA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354849 4 -    752769 TGGA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671540 4 -    737560 tgga
i Manis_javanica.JSZB01003497.1                          C 0 I 7
s Manis_pentadactyla.KN006162.1                             218833 4 +    317179 tgga
i Manis_pentadactyla.KN006162.1                          C 0 I 7
s Marmota_marmota.CZRN01000018.1                           7498995 4 +  40650429 aaaa
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148459 4 +    207569 tgga
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 7
s Mellivora_capensis.MelCap_flattened_line_19308             23809 4 -     74585 taga
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 8
s Meriones_unguiculatus.MerUng_scaffold_7390                 46701 4 -    140813 TAAA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427153 4 +  29670104 taaa
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 7890 4 +     17804 TGGA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8674 4 -     12984 TGGA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16625 4 -     26561 TGGA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982595 4 +  93316391 TGGA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43019 4 +    145209 tgga
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182672 4 +    200668 tgga
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 7
s Miniopterus_natalensis.LDJU01000034.1                    6360773 4 -   8254450 tgca
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 7
s Miniopterus_schreibersii.MinSch_scaffold_23309             39674 4 -     48117 TGCA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 7
s Miopithecus_ogouensis.k141_1534655                         20044 4 -     27822 TGGA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6299 4 +     27589 tgga
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 8
s Mirza_zaza.k141_766280                                     50386 4 -     62432 tgga
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176856 4 +    366855 TGGA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 7
s Mungos_mungo.MunMun_flattened_line_18455                   16173 4 -     63510 tgga
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 214
s Murina_feae.MurFea_scaffold_17764                          36702 4 +     47283 tgga
i Murina_feae.MurFea_scaffold_17764                      C 0 I 7
s Mus_musculus.chr8                                       41682640 4 + 129401213 taaa
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39491590 4 + 130317789 taaa
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80541 4 -     86153 TGTA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14352753 4 +  14710649 taga
i Mustela_putorius.JH418006.1                            C 0 I 8
s Myotis_brandtii.KE162005.1                               9790746 4 +  10118263 tgga
i Myotis_brandtii.KE162005.1                             C 0 I 7
s Myotis_davidii.KB100139.1                                4385108 4 +   6019432 tgga
i Myotis_davidii.KB100139.1                              C 0 I 7
s Myotis_lucifugus.GL429869.1                               380928 4 +   4330536 tgga
i Myotis_lucifugus.GL429869.1                            C 0 I 7
s Myotis_myotis.MyoMyo_scaffold_185951                        3487 4 +      3929 tgga
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 I 7
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117587 4 +    130748 tgga
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26625 4 +     34575 TGGA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466686 4 -  31847680 tgga
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 8
s Noctilio_leporinus.NocLep_scaffold_7894                   125650 4 -    149072 TGAA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 7
s Nomascus_annamensis.k141_1771965                           51367 4 -    132029 TGAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7462 4 -     16345 TGAA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13347 4 +     22201 TGAA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411631 4 -  22158432 TGAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23745 4 -     54323 TGAA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196276 4 +   9404916 tggt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 8
s Nycticebus_bengalensis.LG01                             93634065 4 + 196305487 TGAA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                              823 4 -      3937 TGAA
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562315 4 - 199412804 TGAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549293 4 -   3988456 NNNN
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449496 4 +   2017862 tgga
i Odobenus_rosmarus.KB229312.1                           C 0 I 8
s Ondatra_zibethicus.OndZib_scaffold_7387                    90283 4 -    140218 TAAA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105096 4 +    107918 TAAA
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11379 4 -     14239 cgga
i Orycteropus_afer.OryAfe_flattened_line_171931          I 7 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37315 3 +    559221 tg-t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 8
s Otolemur_crassicaudatus.k141_649260                        37439 4 -     51505 tgaa
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350453 4 +   1103335 tgaa
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470455 4 - 189151597 tgaa
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22248 4 -    230217 tgga
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 219
s Panthera_pardus.KV860321.1                              18459574 4 -  18783137 tgga
i Panthera_pardus.KV860321.1                             C 0 I 219
s Panthera_tigris.KE722367.1                               3970294 4 +   8748460 tgga
i Panthera_tigris.KE722367.1                             C 0 I 219
s Papio_anubis.CM001495.2                                   240857 4 - 183742232 tgga
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7321 4 +     21308 TGGA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288360 4 -  20919399 TGGA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19976 4 -     27687 TGGA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13112 4 +     16796 TGGA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19922 4 -     23640 TGGA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     12899 4 +     78924 tgga
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 222
s Perodicticus_ibeanus.k141_1921260                          23750 4 +     31479 TGAA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16108 4 -     24908 TGAA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37568 4 +     38305 TGGA
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244741 4 +  18517816 taaa
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Piliocolobus_badius.k141_2495623                            6776 4 +      7560 TGGA
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62484 4 -     63152 TGGA
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            45083 4 +     45295 TGGA
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2761 4 +      5735 Tgga
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              879 4 +     22231 tgga
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 7
s Pithecia_albicans.k141_1239476                             62896 4 +    207309 TGGA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3992 4 -     25401 TGGA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29731 4 +     58159 TGGA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30007 4 +     63561 TGGA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29770 4 +     51148 TGGA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554739 4 -   4542175 TGGA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29754 4 +     51125 TGGA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6163 4 +     39866 TGGA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1248 4 -      9282 TGGA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40652 4 -     87950 TGGA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41045 4 -     88961 TGGA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5744 4 -     39403 TGGA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40696 4 +     87928 TGGA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5741 4 -     60166 TGGA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12677 4 -     67232 TGGA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40593 4 -     90634 TGGA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42061 4 +     89403 TGGA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175595 4 - 189387572 tgaa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190413 4 -   9816681 TGAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25239 4 +     69807 TGGA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42434 4 -     80239 tgga
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980604 4 +   4620579 TGGA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564072 4 -   2598838 TGGA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1708 4 -      7103 tgga
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2305 4 -     11706 tgga
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6041 4 -     30655 tgga
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32366 4 +     46564 tgga
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92637 4 -     98465 tgga
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6274 4 +     35169 tgga
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34239 4 +     52041 taaa
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49916 4 -     66298 tgga
i Pteronotus_parnellii.KE847780.1                        C 0 I 7
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2529 4 -     18639 taga
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 8
s Pteropus_alecto.KB030862.1                               5838885 4 -  28871421 tgga
i Pteropus_alecto.KB030862.1                             C 0 I 7
s Pteropus_vampyrus.KN525825.1                             3535450 4 -   4952924 tgga
i Pteropus_vampyrus.KN525825.1                           C 0 I 7
s Puma_concolor.QAVW01001104.1                            18096891 4 +  38429054 tgga
i Puma_concolor.QAVW01001104.1                           C 0 I 219
s Pygathrix_cinerea.k141_1153803                             24649 4 +     91421 TGGA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151142 4 -   7812017 TGGA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5519 4 +     72585 TGGA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020681 4 -  90668790 TGAA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911551 4 +   3329780 tgga
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 7
s Rhinopithecus_bieti.k119_221883                            26459 4 +     27361 tgga
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119826 4 + 195417433 Tgga
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234067 4 -   7961872 tgga
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72868 4 -    116970 tgaa
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 12
s Saguinus_bicolor.k141_1429097                               1841 4 +     27962 GGGA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1849 4 +      6077 GGGA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1868 4 +      5971 GGGA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1922 4 +      5932 GGGA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               106 4 -      4390 GGGA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389189 4 - 209938924 GGGA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1870 4 +      5979 GGGA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2236 4 -      4301 GGGA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236327 4 +   5703754 TGGA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5917 4 +     21866 TGGA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114081 4 +    313613 tgaa
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22966 4 +     27374 TGGA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26485 4 +     58920 TGGA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12981 4 -     45317 TGGA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20639 4 -     42441 TGGA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23319 4 -     29113 TGGA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26388 4 -     48123 TGGA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46598 4 +     77746 TAAA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856385 4 -   1910179 tgaa
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866355 3 +   3870691 -aaa
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4526 4 -     97271 tgga
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 8
s Suricata_suricatta.SurSur_flattened_line_6629             122588 4 +    196729 taga
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 218
s Symphalangus_syndactylus.tarseq_199                       388603 4 +   1523678 TGAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11690 4 +     22964 tgga
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 7
s Tamandua_tetradactyla.TamTet_scaffold_224794                 706 4 +      5583 tgga
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189619 4 +    199430 TGGA
i Tapirus_indicus.TapInd_scaffold_7432                   I 229 I 7
s Tapirus_terrestris.TapTer_scaffold_755                    103573 4 -    539355 TGGA
i Tapirus_terrestris.TapTer_scaffold_755                 I 229 I 7
s Tarsius_lariang.k141_1780720                                4946 4 +      6850 TGGA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4987 4 +     20590 TGGA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350843 4 - 186847797 tgga
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17830 4 -     31044 tgaa
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477734 4 -    610378 tgga
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 7
s Trachypithecus_auratus.k141_1189070                        18530 4 +     26378 TGGA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31195 4 -     78344 TGGA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17851 4 +     25722 TGGA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26076 4 -     62838 TGGA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26193 4 +     46913 TGGA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7001 4 -     28527 TGGA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28015 4 -     64340 TGGA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26052 4 -     63452 TGGA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7495 4 +     22490 TGGA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          923 4 -      6147 TGGA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7898 4 -     13050 tgga
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253137 4 -   6242583 tgga
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58887 4 +     59866 TGGA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105305 4 -    105689 TGGA
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179878 4 +   5085361 tgga
i Ursus_maritimus.KK499267.1                             C 0 I 8
s Varecia_rubra.k141_787544                                  23246 4 -     30710 tgga
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22153 4 -    147434 tgga
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103039 4 -    112863 tggt
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 8
s Xerus_inauris.XerIna_scaffold_2302                        172126 4 -    224448 ataa
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26694 4 -     86975 tgga
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 8
s Zapus_hudsonius.ZapHud_scaffold_230229                      1372 4 +      2695 TGGA
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              22314 7 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     29984 7 -     56120 I
e Octodon_degus.JH651603.1                                11045523 0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69391 0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1925065 7 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  7924 0 +     14636 C
e Dinomys_branickii.DinBra_scaffold_10381                    96482 0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   1602 0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   3027 0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       60521 0 -     66877 C
e Cavia_porcellus.DS562891.1                               4997420 0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4993978 0 +  23392119 C
e Loris_tardigradus.ctg83                                  5041753 282 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            8093 281 +     19643 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tupaia_tana.TupTan_flattened_line_394                       6200 0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1831920 0 -   4065304 C
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100609 1191 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215754 5 +  89631738 I
e Mus_caroli.FMAL02030609.1                                    497 61 +      5579 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3106  3 +     36723 A-------T--T
s Acinonyx_jubatus.LLWD01001279.1                           810851  3 +   1699592 t-------t--t
i Acinonyx_jubatus.LLWD01001279.1                        I 219 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413370  3 +  29979442 t-------t--t
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 8 I 1
s Allactaga_bullata.AllBul_scaffold_20030                    16020  3 -     61208 A-------T--T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 3
s Allenopithecus_nigroviridis.k141_3755588                   45501  3 +     53615 a-------t--t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41441  3 +     44087 A-------T--T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14081  3 -     21945 A-------T--T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15757  3 +     32033 A-------T--T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70210  3 -     84148 A-------T--T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42443  3 -     78289 A-------T--T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41889  3 +     55831 A-------T--T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40331  3 -     64179 A-------T--T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21977  3 -     24835 A-------T--T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38960  3 +     45454 A-------T--T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44658  3 +     70886 A-------T--T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6783  3 +     30854 A-------T--T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30922  3 +     42133 A-------T--T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174712  2 -    412891 t-------t---
i Anoura_caudifer.AnoCau_scaffold_1412                   I 7 I 1
s Aotus_azarae.k141_118258                                   48732  3 -     65372 A-------T--T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42479  3 +     43593 A-------T--T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670492  3 +   5030052 a-------t--t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22134  3 -     23494 A-------T--T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7270  3 +      8415 A-------T--T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14053  3 -     32367 a-------t--t
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 3
s Arctocebus_calabarensis.k141_1364444                       18312  3 -     45910 A-------T--T
i Arctocebus_calabarensis.k141_1364444                   C 0 I 286
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  2998  2 -     15198 c-------t---
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 7 I 1
s Ateles_geoffroyi_b.tarseq_1536                               272722  3 +  21539123 A-------T--T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8889  3 +     48076 A-------T--T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4026  3 -     28759 A-------T--T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31579  3 +     44353 A-------T--T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46950  3 -     71267 A-------T--T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21009  3 -     33135 A-------T--T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4197  3 +     11645 a-------t--t
i Avahi_laniger.k141_2756659                             C 0 I 3
s Avahi_peyrierasi.k141_1823318                               4203  3 -     19611 a-------t--t
i Avahi_peyrierasi.k141_1823318                          C 0 I 3
s Cacajao_ayresi.k141_96119                                   5913  3 +     28062 A-------T--T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41207  3 -     91139 A-------T--T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18733  3 +     95584 A-------T--T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18646  3 +    119600 A-------T--T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8122  3 +     18648 A-------T--T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7783  3 -     13885 A-------T--C
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16483  3 +     17162 A-------T--T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451438  3 + 189096842 A-------T--T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17731  3 -     18408 A-------T--T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503418  3 +  60362399 t-------t--t
i CanFam4.chr16                                          I 8 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7054  3 -     23171 t-------t--t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 8 I 1
s Canis_lupus_dingo.QKWQ01000480.1                          220397  3 +   9314153 t-------t--t
i Canis_lupus_dingo.QKWQ01000480.1                       I 8 I 1
s Canis_lupus_familiaris.chr16                            41613532  3 +  59632846 t-------t--t
i Canis_lupus_familiaris.chr16                           I 8 I 1
s Canis_lupus_orion.HG994398.1                            45105113  3 -  63665305 t-------t--t
i Canis_lupus_orion.HG994398.1                           I 8 I 1
s Carlito_syrichta.NW_007259797.1                           268260  3 +    496798 a-------a--t
i Carlito_syrichta.NW_007259797.1                        C 0 I 3
s Carollia_perspicillata.CarPer_scaffold_170178               3068  2 +      5315 t-------t---
i Carollia_perspicillata.CarPer_scaffold_170178          I 7 I 1
s Cavia_aperea.AVPZ01000300.1                              4993978  3 +  23392119 a-------t--t
i Cavia_aperea.AVPZ01000300.1                            C 0 I 3
s Cavia_porcellus.DS562891.1                               4997420  3 +  23407841 a-------t--t
i Cavia_porcellus.DS562891.1                             C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_23560                       60521  3 -     66877 A-------T--T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 3
s Cebuella_niveiventris.k141_592277                           3015  3 -     12580 A-------T--T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40901  3 +     53515 A-------T--T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369111  3 -  26074798 A-------T--T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6000  3 -     34880 A-------T--T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65095  3 -     89041 A-------T--T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1432  3 -      1636 A-------A--T
i Cephalopachus_bancanus.k141_72622                      C 0 I 3
s Ceratotherium_simum.JH767749.1                          15490176  3 -  27778364 t-------t--t
i Ceratotherium_simum.JH767749.1                         I 7 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17009  3 +     27315 t-------t--t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 7 I 1
s Cercocebus_atys.KQ010504.1                                138680  3 -   4669795 a-------t--t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42420  3 +     47900 A-------T--T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42253  3 -     44860 A-------T--T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42236  3 -    148725 A-------T--T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25334  3 -     40656 A-------T--T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5303  3 +     20796 A-------T--T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9493  3 -     17524 A-------T--T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25215  3 -     34525 A-------T--T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9924  3 -     25376 A-------T--T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362519  3 -  39242232 A-------T--T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268231  3 +  21565898 A-------T--T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29692  3 -     45857 A-------T--T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25508  3 -     32606 A-------T--T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1665  3 +      8499 A-------T--T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23184  3 +     70610 A-------T--T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20109  3 +     36323 A-------T--T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10823  3 -     19938 a-------t--t
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 3
s Cheirogaleus_major.k141_666340                             28631  3 -     33796 A-------T--T
i Cheirogaleus_major.k141_666340                         C 0 I 3
s Cheirogaleus_medius.k141_759766                             3161  3 -     15404 a-------t--t
i Cheirogaleus_medius.k141_759766                        C 0 I 3
s Cheracebus_lucifer.k141_2312002                             6997  3 -     32913 A-------T--T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17410  3 -     40346 A-------T--T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17665  3 +    216457 A-------T--T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17458  3 +     39636 A-------T--T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1847  3 +      5346 A-------T--T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40553  3 -    112038 A-------T--T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6125  3 +     34062 A-------T--T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341006  3 +  18827391 A-------T--T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7551  3 -     44032 A-------T--T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302331  3 - 135778131 A-------T--T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406766  3 -   2368649 g-------t--t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376642  3 - 200372422 a-------t--t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                191  3 -     84244 a-------t--t
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805274 10 +  53390261 ttttgtatt--t
i Condylura_cristata.JH655891.1                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           766  3 -      8242 t-------t--A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 7 I 1
s Cricetomys_gambianus.CriGam_scaffold_14425                 40325  3 -     83289 A-------T--T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 3
s Cricetulus_griseus.LT883664.1                          213112595  3 - 224834208 a-------t--t
i Cricetulus_griseus.LT883664.1                          C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2146  3 +     87169 T-------T--T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 223 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    642836  3 -   1526836 A-------T--T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3027  3 +     50838 A-------T--T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 3
s Cuniculus_paca.CunPac_flattened_line_7025                   1602  3 +     36344 A-------T--T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 3
s Dasypus_novemcinctus.JH564415.1                          2108154  3 -   2246927 a-------t--t
i Dasypus_novemcinctus.JH564415.1                        C 0 I 3
s Daubentonia_madagascariensis.ctg71                        290578  3 +  12879189 a-------t--t
i Daubentonia_madagascariensis.ctg71                     C 0 I 3
s Desmodus_rotundus.KZ672289.1                            11862735  3 -  20541912 t-------t--t
i Desmodus_rotundus.KZ672289.1                           I 7 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662469  3 -   1390856 t-------t--t
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 7 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                  137253  3 -    198055 t-------t--t
i Diceros_bicornis.DicBicMic_scaffold_5955               I 7 I 1
s Dinomys_branickii.DinBra_scaffold_10381                    96482  3 -    115145 A-------T--T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 3
s Dipodomys_ordii.KN672350.1                              18948372  3 -  37912305 a-------t--t
i Dipodomys_ordii.KN672350.1                             C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_89095                   3319  3 -     10735 A-------T--T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 3
s Dolichotis_patagonum.DolPat_scaffold_80628                  7924  3 +     14636 G-------T--T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 3
s Echinops_telfairi.JH980293.1                            62851937  3 - 111700974 t-------t--a
i Echinops_telfairi.JH980293.1                           C 0 I 3
s Eidolon_helvum.AWHC01266696.1                               4302  3 +     19438 g-------t--t
i Eidolon_helvum.AWHC01266696.1                          I 7 I 1
s Elephantulus_edwardii.JH947257.1                         9105466  3 -  10337057 a-------t--t
i Elephantulus_edwardii.JH947257.1                       C 0 I 3
s Ellobius_lutescens.LOEQ01008920.1                          28536  3 +    110024 g-------t--t
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 3
s Ellobius_talpinus.LOJH01026522.1                           10516  3 +     18970 g-------t--t
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 3
s Enhydra_lutris.KZ291758.1                               24913952  3 +  41312741 t-------t--t
i Enhydra_lutris.KZ291758.1                              I 8 I 1
s Eptesicus_fuscus.JH977646.1                             12576369  3 +  14770903 t-------t--t
i Eptesicus_fuscus.JH977646.1                            I 7 I 1
s Equus_asinus.JREZ01000139.1                              3039451  3 -   4378816 t-------t--t
i Equus_asinus.JREZ01000139.1                            I 7 I 1
s Equus_caballus.CM000403.2                               21373385  3 +  39960074 t-------t--t
i Equus_caballus.CM000403.2                              I 7 I 1
s Equus_przewalskii.KK951119.1                              410171  3 -    498745 t-------t--t
i Equus_przewalskii.KK951119.1                           I 7 I 1
s Erythrocebus_patas.Contig38                               260529  3 +  21539334 A-------T--T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12733  3 -     24895 a-------t--t
i Eulemur_albifrons.k141_51491                           C 0 I 3
s Eulemur_collaris.k141_601111                               40445  3 -     70999 a-------t--t
i Eulemur_collaris.k141_601111                           C 0 I 3
s Eulemur_coronatus.k141_384460                              84404  3 +    112731 a-------t--t
i Eulemur_coronatus.k141_384460                          C 0 I 3
s Eulemur_flavifrons.k141_433119                             40977  3 +     68309 a-------t--t
i Eulemur_flavifrons.k141_433119                         C 0 I 3
s Eulemur_fulvus.k141_636316                                 51302  3 -     65740 A-------T--T
i Eulemur_fulvus.k141_636316                             C 0 I 3
s Eulemur_macaco.k141_1562045                                21932  3 -     75513 A-------T--T
i Eulemur_macaco.k141_1562045                            C 0 I 3
s Eulemur_mongoz.k141_232305                                 46125  3 -     97555 A-------T--T
i Eulemur_mongoz.k141_232305                             C 0 I 3
s Eulemur_rubriventer.k141_1423786                            2852  3 +     30972 a-------t--t
i Eulemur_rubriventer.k141_1423786                       C 0 I 3
s Eulemur_rufus.k141_514691                                  40575  3 -     52037 a-------t--t
i Eulemur_rufus.k141_514691                              C 0 I 3
s Eulemur_sanfordi.k141_1122526                              56976  3 -    111500 a-------t--t
i Eulemur_sanfordi.k141_1122526                          C 0 I 3
s Felis_catus.CM001381.2                                 186244761  3 - 206538554 t-------t--t
i Felis_catus.CM001381.2                                 I 219 I 1
s Felis_catus_fca126.CM031415.1                          185114547  3 - 205367284 t-------t--t
i Felis_catus_fca126.CM031415.1                          I 219 I 1
s Felis_nigripes.FelNig_flattened_line_31944                 25651  3 -     30238 T-------T--T
i Felis_nigripes.FelNig_flattened_line_31944             I 219 I 1
s Galago_moholi.ctg3793                                     122322  3 -    137831 a-------t--t
i Galago_moholi.ctg3793                                  C 0 I 295
s Galago_senegalensis.k141_991736                             5862  3 +     22493 a-------t--t
i Galago_senegalensis.k141_991736                        C 0 I 295
s Galagoides_demidoff.k141_561628                            17904  3 -     32986 a-------t--t
i Galagoides_demidoff.k141_561628                        C 0 I 306
s Galeopterus_variegatus.GalVar_scaffold_74466               17068  3 +     18121 A-------T--T
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 3
s Glis_glis.GliGli_scaffold_33859                            31953  3 -     36801 A-------T--T
i Glis_glis.GliGli_scaffold_33859                        C 0 I 3
s Gorilla_beringei.k141_3358147                               3443  3 -      8343 A-------T--T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252454  3 - 186649187 a-------t--t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11271  3 +     11903 A-------T--T
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 I 3
s Hapalemur_alaotrensis.k141_330369                          12661  3 -     40692 a-------t--t
i Hapalemur_alaotrensis.k141_330369                      C 0 I 3
s Hapalemur_gilberti.k141_646465                             34062  3 +     49394 a-------t--t
i Hapalemur_gilberti.k141_646465                         C 0 I 3
s Hapalemur_griseus.k141_763500                              58931  3 -     66874 a-------t--t
i Hapalemur_griseus.k141_763500                          C 0 I 3
s Hapalemur_meridionalis.k141_258450                          7804  3 -     42923 a-------t--t
i Hapalemur_meridionalis.k141_258450                     C 0 I 3
s Hapalemur_occidentalis.k141_578367                         14804  3 -     53142 a-------t--t
i Hapalemur_occidentalis.k141_578367                     C 0 I 3
s Helogale_parvula.HelPar_flattened_line_2585                28643  3 -    327341 T-------T--T
i Helogale_parvula.HelPar_flattened_line_2585            I 217 I 1
s Heterocephalus_glaber.JH602082.1                         1925072  3 -  22651954 a-------t--t
i Heterocephalus_glaber.JH602082.1                       I 7 I 3
s Hipposideros_armiger.JXIK01000431.1                      1548215  5 -   1711038 tt----a-t--t
i Hipposideros_armiger.JXIK01000431.1                    I 7 I 1
s Hipposideros_galeritus.HipGal_scaffold_23202               47531  5 +     49977 tt----a-t--t
i Hipposideros_galeritus.HipGal_scaffold_23202           I 7 I 1
s Hoolock_leuconedys.ctg274                                    140447  3 -    630532 A-------T--T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67125  3 +     83186 T-------T--T
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 216 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69391  3 +    143317 A-------T--T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 3
s Hylobates_agilis.k141_1155965                               3482  3 +     12352 A-------T--T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10665  3 +     55766 A-------T--T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050261  3 + 191637585 A-------T--T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799139  3 +  11177569 A-------T--T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384790  3 +   7955117 a-------t--t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Indri_indri.k141_2415743                                     317  3 +     11955 A-------T--T
i Indri_indri.k141_2415743                               C 0 I 3
s Jaculus_jaculus.JH725527.1                               1237203  3 +   9596543 a-------t--t
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Lagothrix_lagothricha.k141_246028                          41265  3 +    110728 A-------T--T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    29082  5 -     49555 G-------TTAA
i Lasiurus_borealis.LasBor_scaffold_26245                I 59 I 184
s Lemur_catta.scaffold_24                                 14757452  3 +  30322482 a-------t--t
i Lemur_catta.scaffold_24                                C 0 I 3
s Leontocebus_fuscicollis.k141_2994775                        1934  3 -     13097 A-------T--T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1885  3 +      5940 A-------T--T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1516  3 -      5717 A-------T--T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8131  3 -     11567 A-------T--T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9512  3 -     12945 A-------T--T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6987  3 +     29618 A-------T--T
i Lepilemur_ankaranensis.k141_567626                     C 0 I 3
s Lepilemur_dorsalis.k141_387009                              6984  3 +     31569 A-------T--T
i Lepilemur_dorsalis.k141_387009                         C 0 I 3
s Lepilemur_ruficaudatus.k141_330196                          6994  3 +     24756 a-------t--t
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 3
s Lepilemur_septentrionalis.k141_360456                       6988  3 +     16388 A-------T--T
i Lepilemur_septentrionalis.k141_360456                  C 0 I 3
s Leptonychotes_weddellii.KB714746.1                        811301  3 -   3914936 t-------t--t
i Leptonychotes_weddellii.KB714746.1                     I 8 I 1
s Lepus_americanus.LepAme_scaffold_56121                     15903  3 +     24238 a-------t--t
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 3
s Lophocebus_aterrimus.ctg367                               330633  3 -   1826925 A-------T--T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39078277  3 +  43346337 a-------t--t
i Loxodonta_africana.GL010049.1                          C 0 I 3
s Lycaon_pictus.CM007581.1                                41612687  3 +  59628241 t-------t--t
i Lycaon_pictus.CM007581.1                               I 8 I 1
s Macaca_arctoides.k141_1757516                              42950  3 -     61512 A-------T--T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370611  3 -  60120075 A-------T--T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22866  3 +     30207 A-------T--T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19969  3 -     24934 A-------T--T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22818  3 +     30527 A-------T--T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34008  3 -     50087 A-------T--T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43779  3 +     51645 A-------T--T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412947  3 - 187317192 a-------t--t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397170  3 +  25927173 a-------t--t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46334  3 -     62418 A-------T--T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22989  3 +     24253 A-------T--T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42810  3 +     59329 A-------T--T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268743  3 +    668171 A-------T--T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19924  3 +     21031 A-------T--T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  521  3 +     17132 A-------T--T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221267  3 -    270270 g-------t--t
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 7 I 1
s Mandrillus_leucophaeus.scaffold280                        320021  3 +  24302211 A-------T--T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354853  3 -    752769 A-------T--T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671551  3 -    737560 t-------t--t
i Manis_javanica.JSZB01003497.1                          I 7 I 1
s Manis_pentadactyla.KN006162.1                             218844  3 +    317179 t-------t--t
i Manis_pentadactyla.KN006162.1                          I 7 I 1
s Marmota_marmota.CZRN01000018.1                           7498999  3 +  40650429 a-------t--t
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                       148470  1 +    207569 t-----------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 7 I 1
s Mellivora_capensis.MelCap_flattened_line_19308             23821  3 -     74585 t-------t--t
i Mellivora_capensis.MelCap_flattened_line_19308         I 8 I 3
s Meriones_unguiculatus.MerUng_scaffold_7390                 46705  3 -    140813 A-------T--T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 3
s Mesocricetus_auratus.KB708134.1                         17427157  3 +  29670104 a-------t--t
i Mesocricetus_auratus.KB708134.1                        C 0 I 3
s Mico_argentatus.k141_582562                                 7894  3 +     17804 A-------T--T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8678  3 -     12984 A-------T--T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16629  3 -     26561 A-------T--T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982599  3 +  93316391 A-------T--t
i Microcebus_murinus.CM007674.1                          C 0 I 3
s Microgale_talazaci.MicTal_scaffold_6613                    43023  3 +    145209 t-------t--a
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_2233                182683  2 +    200668 t-------t---
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 7 I 2
s Miniopterus_natalensis.LDJU01000034.1                    6360784  3 -   8254450 g-------t--t
i Miniopterus_natalensis.LDJU01000034.1                  I 7 I 1
s Miniopterus_schreibersii.MinSch_scaffold_23309             39685  3 -     48117 T-------T--T
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 7 I 1
s Miopithecus_ogouensis.k141_1534655                         20048  3 -     27822 A-------T--T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6311  3 +     27589 t-------t--t
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 8 I 1
s Mirza_zaza.k141_766280                                     50390  3 -     62432 a-------t--t
i Mirza_zaza.k141_766280                                 C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176867  2 +    366855 T-------T---
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 7 I 1
s Mungos_mungo.MunMun_flattened_line_18455                   16391  3 -     63510 T-------T--T
i Mungos_mungo.MunMun_flattened_line_18455               I 214 I 1
s Murina_feae.MurFea_scaffold_17764                          36713  3 +     47283 t-------t--t
i Murina_feae.MurFea_scaffold_17764                      I 7 I 1
s Mus_musculus.chr8                                       41682644  3 + 129401213 a-------t--t
i Mus_musculus.chr8                                      C 0 I 3
s Mus_spretus.CM004101.1                                  39491594  3 + 130317789 a-------t--t
i Mus_spretus.CM004101.1                                 C 0 I 3
s Muscardinus_avellanarius.MusAve_scaffold_12866             80545  3 -     86153 A-------T--T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 3
s Mustela_putorius.JH418006.1                             14352765  3 +  14710649 t-------t--t
i Mustela_putorius.JH418006.1                            I 8 I 1
s Myotis_brandtii.KE162005.1                               9790757  3 +  10118263 a-------t--t
i Myotis_brandtii.KE162005.1                             I 7 I 2
s Myotis_davidii.KB100139.1                                4385119  3 +   6019432 t-------t--t
i Myotis_davidii.KB100139.1                              I 7 I 2
s Myotis_lucifugus.GL429869.1                               380939  3 +   4330536 a-------t--t
i Myotis_lucifugus.GL429869.1                            I 7 I 2
s Myotis_myotis.MyoMyo_scaffold_185951                        3498  3 +      3929 t-------t--t
i Myotis_myotis.MyoMyo_scaffold_185951                   I 7 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117591  3 +    130748 a-------t--t
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 3
s Nasalis_larvatus.k141_1350636                              26629  3 +     34575 A-------T--T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466698  3 -  31847680 t-------t--t
i Neomonachus_schauinslandi.NINY01007730.1               I 8 I 1
s Noctilio_leporinus.NocLep_scaffold_7894                   125661  3 -    149072 T-------T--T
i Noctilio_leporinus.NocLep_scaffold_7894                I 7 I 1
s Nomascus_annamensis.k141_1771965                           51371  3 -    132029 A-------T--T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7466  3 -     16345 A-------T--T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13351  3 +     22201 A-------T--T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411635  3 -  22158432 A-------T--T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23749  3 -     54323 A-------T--T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196288  3 +   9404916 t-------t--a
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 8 I 1
s Nycticebus_bengalensis.LG01                             93634069  3 + 196305487 A-------t--t
i Nycticebus_bengalensis.LG01                            C 0 I 314
s Nycticebus_coucang.k141_3846325                              827  3 -      3937 A-------t--t
i Nycticebus_coucang.k141_3846325                        C 0 I 314
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562319  3 - 199412804 A-------t--t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 303
s Ochotona_princeps.JH802162.1                             2549297  3 -   3988456 N-------N--N
i Ochotona_princeps.JH802162.1                           C 0 I 3
s Octodon_degus.JH651603.1                                11045523  3 -  11899542 a-------t--t
i Octodon_degus.JH651603.1                               C 0 I 15
s Odobenus_rosmarus.KB229312.1                             1449508  3 +   2017862 t-------t--t
i Odobenus_rosmarus.KB229312.1                           I 8 I 1
s Ondatra_zibethicus.OndZib_scaffold_7387                    90287  3 -    140218 A-------T--T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_2487                   105100  3 +    107918 A-------T--T
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 I 3
s Orycteropus_afer.OryAfe_flattened_line_171931              11383  3 -     14239 a-------t--t
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 3
s Otocyon_megalotis.JAEUCK010005147.1                        37326  3 +    559221 t-------t--a
i Otocyon_megalotis.JAEUCK010005147.1                    I 8 I 1
s Otolemur_crassicaudatus.k141_649260                        37443  3 -     51505 a-------t--t
i Otolemur_crassicaudatus.k141_649260                    C 0 I 322
s Otolemur_garnettii.GL873799.1                             350457  3 +   1103335 a-------t--t
i Otolemur_garnettii.GL873799.1                          C 0 I 311
s Pan_troglodytes.CM009242.2                               1470459  3 - 189151597 a-------t--t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22471  3 -    230217 t-------t--t
i Panthera_onca.PanOnc_flattened_line_3271               I 219 I 1
s Panthera_pardus.KV860321.1                              18459797  3 -  18783137 t-------t--t
i Panthera_pardus.KV860321.1                             I 219 I 1
s Panthera_tigris.KE722367.1                               3970517  3 +   8748460 t-------t--t
i Panthera_tigris.KE722367.1                             I 219 I 1
s Papio_anubis.CM001495.2                                   240861  3 - 183742232 a-------t--t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7325  3 +     21308 A-------T--T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288364  3 -  20919399 A-------T--T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19980  3 -     27687 A-------T--T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13116  3 +     16796 A-------T--T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19926  3 -     23640 A-------T--T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13125  3 +     78924 T-------T--A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 222 C 0
s Perodicticus_ibeanus.k141_1921260                          23754  3 +     31479 A-------T--T
i Perodicticus_ibeanus.k141_1921260                      C 0 I 1631
s Perodicticus_potto.k141_1854441                            16112  3 -     24908 A-------T--T
i Perodicticus_potto.k141_1854441                        C 0 I 1642
s Perognathus_longimembris.PerPac_flattened_line_28053       37572  3 +     38305 A-------T--T
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 I 3
s Peromyscus_maniculatus.KI615324.1                         244745  3 +  18517816 a-------t--t
i Peromyscus_maniculatus.KI615324.1                      C 0 I 3
s Petromus_typicus.PetTyp_scaffold_17301                     29991  3 -     56120 A-------T--T
i Petromus_typicus.PetTyp_scaffold_17301                 I 7 I 3
s Piliocolobus_badius.k141_2495623                            6780  3 +      7560 A-------T--T
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62488  3 -     63152 A-------T--T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            45087  3 +     45295 A-------T--T
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2765  3 +      5735 a-------t--t
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              890  3 +     22231 t-------t--t
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 7 I 1
s Pithecia_albicans.k141_1239476                             62900  3 +    207309 A-------T--T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3996  3 -     25401 A-------T--T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29735  3 +     58159 A-------T--T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30011  3 +     63561 A-------T--T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29774  3 +     51148 A-------T--T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554743  3 -   4542175 A-------T--T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29758  3 +     51125 A-------T--T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6167  3 +     39866 A-------T--T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1252  3 -      9282 A-------T--T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40656  3 -     87950 A-------T--T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41049  3 -     88961 A-------T--T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5748  3 -     39403 A-------T--T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40700  3 +     87928 A-------T--T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5745  3 -     60166 A-------T--T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12681  3 -     67232 A-------T--T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40597  3 -     90634 A-------T--T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42065  3 +     89403 A-------T--T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175599  3 - 189387572 a-------t--t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190417  3 -   9816681 A-------T--T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25243  3 +     69807 A-------T--T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42438  3 -     80239 a-------t--t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980608  3 +   4620579 A-------T--T
i Prolemur_simus.MPIZ01000396.1                          C 0 I 3
s Propithecus_coquerelli.NW_012148875.1                    1564076  3 -   2598838 A-------T--C
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 3
s Propithecus_coronatus.k141_209299                           1712  3 -      7103 a-------t--c
i Propithecus_coronatus.k141_209299                      C 0 I 3
s Propithecus_diadema.k141_153680                             2309  3 -     11706 a-------t--c
i Propithecus_diadema.k141_153680                        C 0 I 3
s Propithecus_edwardsi.k141_635656                            6045  3 -     30655 a-------t--c
i Propithecus_edwardsi.k141_635656                       C 0 I 3
s Propithecus_perrieri.k141_1496898                          32370  3 +     46564 a-------t--c
i Propithecus_perrieri.k141_1496898                      C 0 I 3
s Propithecus_tattersalli.k141_1127767                       92641  3 -     98465 a-------t--c
i Propithecus_tattersalli.k141_1127767                   C 0 I 3
s Propithecus_verreauxi.k141_1047036                          6278  3 +     35169 a-------t--c
i Propithecus_verreauxi.k141_1047036                     C 0 I 3
s Psammomys_obesus.NESX01036366.1                            34243  3 +     52041 a-------t--t
i Psammomys_obesus.NESX01036366.1                        C 0 I 3
s Pteronotus_parnellii.KE847780.1                            49927  2 -     66298 t-------t---
i Pteronotus_parnellii.KE847780.1                        I 7 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2541  3 -     18639 t-------t--t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 8 I 1
s Pteropus_alecto.KB030862.1                               5838896  3 -  28871421 g-------t--t
i Pteropus_alecto.KB030862.1                             I 7 I 1
s Pteropus_vampyrus.KN525825.1                             3535461  3 -   4952924 g-------t--t
i Pteropus_vampyrus.KN525825.1                           I 7 I 1
s Puma_concolor.QAVW01001104.1                            18097114  3 +  38429054 t-------t--t
i Puma_concolor.QAVW01001104.1                           I 219 I 1
s Pygathrix_cinerea.k141_1153803                             24653  3 +     91421 A-------T--T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151146  3 -   7812017 A-------T--T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5523  3 +     72585 A-------T--T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020685  3 -  90668790 A-------C--T
i Rattus_norvegicus.chr16                                C 0 I 3
s Rhinolophus_sinicus.LVEH01000134.1                       2911562  1 +   3329780 c-----------
i Rhinolophus_sinicus.LVEH01000134.1                     I 7 C 0
s Rhinopithecus_bieti.k119_221883                            26463  3 +     27361 a-------t--t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119830  3 + 195417433 a-------t--t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234071  3 -   7961872 a-------t--t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72884  3 -    116970 g-------t--t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 12 I 1
s Saguinus_bicolor.k141_1429097                               1845  3 +     27962 A-------T--T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1853  3 +      6077 A-------T--T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1872  3 +      5971 A-------T--T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1926  3 +      5932 A-------T--T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               110  3 -      4390 A-------T--T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389193  3 - 209938924 A-------T--T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1874  3 +      5979 A-------T--T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2240  3 -      4301 A-------T--T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236331  3 +   5703754 A-------T--T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5921  3 +     21866 A-------T--T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114085 10 +    313613 tattttatt--t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 1
s Semnopithecus_entellus.k141_158471                         22970  3 +     27374 A-------T--T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26489  3 +     58920 A-------T--T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12985  3 -     45317 A-------T--T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20643  3 -     42441 A-------T--T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23323  3 -     29113 A-------T--T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26392  3 -     48123 A-------T--T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46602  3 +     77746 A-------T--T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_126            1856389  3 -   1910179 a-------t--t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1866358  3 +   3870691 a-------t--t
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525              4538  3 -     97271 t-------t--t
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 8 I 1
s Suricata_suricatta.SurSur_flattened_line_6629             122810  3 +    196729 T-------T--T
i Suricata_suricatta.SurSur_flattened_line_6629          I 218 I 1
s Symphalangus_syndactylus.tarseq_199                       388607  3 +   1523678 A-------T--T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11701  3 +     22964 t-------a--t
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 7 I 1
s Tamandua_tetradactyla.TamTet_scaffold_224794                 710  3 +      5583 a-------t--t
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 3
s Tapirus_indicus.TapInd_scaffold_7432                      189630  3 +    199430 T-------T--T
i Tapirus_indicus.TapInd_scaffold_7432                   I 7 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    103584  3 -    539355 T-------T--T
i Tapirus_terrestris.TapTer_scaffold_755                 I 7 I 1
s Tarsius_lariang.k141_1780720                                4950  3 +      6850 A-------A--T
i Tarsius_lariang.k141_1780720                           C 0 I 3
s Tarsius_wallacei.k141_226975                                4991  3 +     20590 A-------A--T
i Tarsius_wallacei.k141_226975                           C 0 I 3
s Theropithecus_gelada.CM009954.1                           350847  3 - 186847797 a-------t--t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22321  3 -     33621 A-------T--T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 7 I 3
s Tolypeutes_matacus.TolMat_scaffold_31955                   17834  3 -     31044 a-------t--t
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 3
s Tonatia_saurophila.TonSau_scaffold_294                    477745  2 -    610378 g-------t---
i Tonatia_saurophila.TonSau_scaffold_294                 I 7 I 1
s Trachypithecus_auratus.k141_1189070                        18534  3 +     26378 A-------T--T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31199  3 -     78344 A-------T--T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17855  3 +     25722 A-------T--T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26080  3 -     62838 A-------T--T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26197  3 +     46913 A-------T--T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7005  3 -     28527 A-------T--T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28019  3 -     64340 A-------T--T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26056  3 -     63452 A-------T--T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7499  3 +     22490 A-------T--T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          927  3 -      6147 A-------T--T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7902  3 -     13050 a-------t--t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253141  3 -   6242583 a-------t--t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58891  3 +     59866 A-------T--T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831920  3 -   4065304 a-------t--t
i Tupaia_chinensis.KB320699.1                            C 0 I 3
s Tupaia_tana.TupTan_flattened_line_394                       6200  3 -     70247 c-------t--t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_7153                   105309 10 -    105689 TTTTGTATT--T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 1
s Ursus_maritimus.KK499267.1                                179890  3 +   5085361 t-------t--t
i Ursus_maritimus.KK499267.1                             I 8 I 1
s Varecia_rubra.k141_787544                                  23250  3 -     30710 a-------t--t
i Varecia_rubra.k141_787544                              C 0 I 3
s Varecia_variegata.k141_289850                              22157  3 -    147434 a-------t--t
i Varecia_variegata.k141_289850                          C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_12041                103051  1 -    112863 t-----------
i Vulpes_lagopus.VulLag_flattened_line_12041             I 8 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172130  3 -    224448 a-------t--t
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_17732         26706  3 -     86975 t-------t--t
i Zalophus_californianus.ZalCal_flattened_line_17732     I 8 I 1
s Zapus_hudsonius.ZapHud_scaffold_230229                      1376  3 +      2695 G-------T--T
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 3
e Loris_tardigradus.ctg83                                  5041753 282 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            8093 281 +     19643 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100609 1191 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Mus_caroli.FMAL02030609.1                                    497 61 +      5579 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3109  2 +     36723 G------------T
s Allactaga_bullata.AllBul_scaffold_20030                    16026  2 -     61208 A------------T
i Allactaga_bullata.AllBul_scaffold_20030                I 3 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45504  2 +     53615 g------------t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41444  2 +     44087 G------------T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14084  2 -     21945 G------------T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15760  2 +     32033 G------------T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70213  2 -     84148 G------------T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42446  2 -     78289 G------------T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41892  2 +     55831 G------------T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40334  2 -     64179 G------------T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21980  2 -     24835 G------------T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38963  2 +     45454 G------------T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44661  2 +     70886 G------------T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6786  2 +     30854 G------------T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30925  2 +     42133 G------------T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   48735  2 -     65372 G------------T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42482  2 +     43593 G------------T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670495  2 +   5030052 g------------t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22137  2 -     23494 G------------T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7273  2 +      8415 G------------T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14059  2 -     32367 A------------G
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 3 C 0
s Arctocebus_calabarensis.k141_1364444                       18601  2 -     45910 A------------T
i Arctocebus_calabarensis.k141_1364444                   I 286 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272725  2 +  21539123 G------------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8892  2 +     48076 G------------T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4029  2 -     28759 G------------T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31582  2 +     44353 G------------T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46953  2 -     71267 G------------T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21012  2 -     33135 G------------T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4203  2 +     11645 a------------t
i Avahi_laniger.k141_2756659                             I 3 C 0
s Avahi_peyrierasi.k141_1823318                               4209  2 -     19611 a------------t
i Avahi_peyrierasi.k141_1823318                          I 3 C 0
s Cacajao_ayresi.k141_96119                                   5916  2 +     28062 G------------T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41210  2 -     91139 G------------T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18736  2 +     95584 G------------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18649  2 +    119600 G------------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8125  2 +     18648 G------------T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7786  2 -     13885 G------------T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16486  2 +     17162 G------------T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451441  2 + 189096842 G------------T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17734  2 -     18408 G------------T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268266  2 +    496798 a------------t
i Carlito_syrichta.NW_007259797.1                        I 3 C 0
s Cavia_aperea.AVPZ01000300.1                              4993984  2 +  23392119 g------------t
i Cavia_aperea.AVPZ01000300.1                            I 3 C 0
s Cavia_porcellus.DS562891.1                               4997426  2 +  23407841 g------------t
i Cavia_porcellus.DS562891.1                             I 3 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60527  2 -     66877 G------------T
i Cavia_tschudii.CavTsc_scaffold_23560                   I 3 C 0
s Cebuella_niveiventris.k141_592277                           3018  2 -     12580 G------------T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40904  2 +     53515 G------------T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369114  2 -  26074798 G------------T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6003  2 -     34880 G------------T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65098  2 -     89041 G------------T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1438  2 -      1636 A------------T
i Cephalopachus_bancanus.k141_72622                      I 3 C 0
s Cercocebus_atys.KQ010504.1                                138683  2 -   4669795 a------------t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42423  2 +     47900 A------------T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42256  2 -     44860 A------------T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42239  2 -    148725 A------------T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25337  2 -     40656 G------------T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5306  2 +     20796 G------------T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9496  2 -     17524 G------------T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25218  2 -     34525 G------------T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9927  2 -     25376 G------------T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362522  2 -  39242232 G------------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268234  2 +  21565898 G------------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29695  2 -     45857 G------------T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25511  2 -     32606 G------------T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1668  2 +      8499 G------------T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23187  2 +     70610 G------------T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20112  2 +     36323 G------------T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             28637  2 -     33796 A------------T
i Cheirogaleus_major.k141_666340                         I 3 C 0
s Cheirogaleus_medius.k141_759766                             3167  2 -     15404 a------------t
i Cheirogaleus_medius.k141_759766                        I 3 C 0
s Cheracebus_lucifer.k141_2312002                             7000  2 -     32913 G------------T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17413  2 -     40346 G------------T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17668  2 +    216457 G------------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17461  2 +     39636 G------------T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1850  2 +      5346 G------------T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40556  2 -    112038 G------------T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6128  2 +     34062 G------------T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341009  2 +  18827391 G------------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7554  2 -     44032 G------------T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302334  2 - 135778131 G------------T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406769  2 -   2368649 g------------t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376645  2 - 200372422 g------------t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                194  2 -     84244 g------------t
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40331  2 -     83289 G------------T
i Cricetomys_gambianus.CriGam_scaffold_14425             I 3 C 0
s Cricetulus_griseus.LT883664.1                          213112601  2 - 224834208 a------------t
i Cricetulus_griseus.LT883664.1                          I 3 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642842  2 -   1526836 A------------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 3 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1608  2 +     36344 G------------T
i Cuniculus_paca.CunPac_flattened_line_7025              I 3 C 0
s Dasypus_novemcinctus.JH564415.1                          2108160  2 -   2246927 a------------t
i Dasypus_novemcinctus.JH564415.1                        I 3 I 3
s Daubentonia_madagascariensis.ctg71                        290584  2 +  12879189 a------------c
i Daubentonia_madagascariensis.ctg71                     I 3 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96488  2 -    115145 G------------T
i Dinomys_branickii.DinBra_scaffold_10381                I 3 C 0
s Dipodomys_ordii.KN672350.1                              18948378  1 -  37912305 a-------------
i Dipodomys_ordii.KN672350.1                             I 3 I 1
s Dipodomys_stephensi.DipSte_scaffold_89095                   3325  1 -     10735 A-------------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 3 I 1
s Dolichotis_patagonum.DolPat_scaffold_80628                  7930  2 +     14636 G------------T
i Dolichotis_patagonum.DolPat_scaffold_80628             I 3 C 0
s Echinops_telfairi.JH980293.1                            62851943 14 - 111700974 aactaccacagtac
i Echinops_telfairi.JH980293.1                           I 3 C 0
s Elephantulus_edwardii.JH947257.1                         9105472  2 -  10337057 a------------c
i Elephantulus_edwardii.JH947257.1                       I 3 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28542  2 +    110024 a------------t
i Ellobius_lutescens.LOEQ01008920.1                      I 3 C 0
s Ellobius_talpinus.LOJH01026522.1                           10522  2 +     18970 a------------t
i Ellobius_talpinus.LOJH01026522.1                       I 3 C 0
s Erythrocebus_patas.Contig38                               260532  2 +  21539334 G------------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12739  2 -     24895 a------------t
i Eulemur_albifrons.k141_51491                           I 3 C 0
s Eulemur_collaris.k141_601111                               40451  2 -     70999 a------------t
i Eulemur_collaris.k141_601111                           I 3 C 0
s Eulemur_coronatus.k141_384460                              84410  2 +    112731 a------------t
i Eulemur_coronatus.k141_384460                          I 3 C 0
s Eulemur_flavifrons.k141_433119                             40983  2 +     68309 a------------t
i Eulemur_flavifrons.k141_433119                         I 3 C 0
s Eulemur_fulvus.k141_636316                                 51308  2 -     65740 A------------T
i Eulemur_fulvus.k141_636316                             I 3 C 0
s Eulemur_macaco.k141_1562045                                21938  2 -     75513 A------------T
i Eulemur_macaco.k141_1562045                            I 3 C 0
s Eulemur_mongoz.k141_232305                                 46131  2 -     97555 A------------T
i Eulemur_mongoz.k141_232305                             I 3 C 0
s Eulemur_rubriventer.k141_1423786                            2858  2 +     30972 a------------t
i Eulemur_rubriventer.k141_1423786                       I 3 C 0
s Eulemur_rufus.k141_514691                                  40581  2 -     52037 a------------t
i Eulemur_rufus.k141_514691                              I 3 C 0
s Eulemur_sanfordi.k141_1122526                              56982  2 -    111500 a------------t
i Eulemur_sanfordi.k141_1122526                          I 3 C 0
s Galago_moholi.ctg3793                                     122620  2 -    137831 a------------t
i Galago_moholi.ctg3793                                  I 295 C 0
s Galago_senegalensis.k141_991736                             6160  2 +     22493 a------------t
i Galago_senegalensis.k141_991736                        I 295 C 0
s Galagoides_demidoff.k141_561628                            18213  2 -     32986 a------------t
i Galagoides_demidoff.k141_561628                        I 306 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17074  2 +     18121 A------------T
i Galeopterus_variegatus.GalVar_scaffold_74466           I 3 C 0
s Glis_glis.GliGli_scaffold_33859                            31959  2 -     36801 A------------T
i Glis_glis.GliGli_scaffold_33859                        I 3 C 0
s Gorilla_beringei.k141_3358147                               3446  2 -      8343 G------------T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252457  2 - 186649187 g------------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11277  2 +     11903 A------------T
i Graphiurus_murinus.GraMur_scaffold_90206               I 3 C 0
s Hapalemur_alaotrensis.k141_330369                          12667  2 -     40692 a------------t
i Hapalemur_alaotrensis.k141_330369                      I 3 C 0
s Hapalemur_gilberti.k141_646465                             34068  2 +     49394 a------------t
i Hapalemur_gilberti.k141_646465                         I 3 C 0
s Hapalemur_griseus.k141_763500                              58937  2 -     66874 a------------t
i Hapalemur_griseus.k141_763500                          I 3 C 0
s Hapalemur_meridionalis.k141_258450                          7810  2 -     42923 a------------t
i Hapalemur_meridionalis.k141_258450                     I 3 C 0
s Hapalemur_occidentalis.k141_578367                         14810  2 -     53142 a------------t
i Hapalemur_occidentalis.k141_578367                     I 3 C 0
s Heterocephalus_glaber.JH602082.1                         1925078  2 -  22651954 g------------t
i Heterocephalus_glaber.JH602082.1                       I 3 C 0
s Hoolock_leuconedys.ctg274                                    140450  2 -    630532 G------------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69397  2 +    143317 G------------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3 C 0
s Hylobates_agilis.k141_1155965                               3485  2 +     12352 G------------T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10668  2 +     55766 G------------T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050264  2 + 191637585 G------------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799142  2 +  11177569 G------------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384796  2 +   7955117 a------------c
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Indri_indri.k141_2415743                                     323  2 +     11955 A------------T
i Indri_indri.k141_2415743                               I 3 C 0
s Jaculus_jaculus.JH725527.1                               1237209  2 +   9596543 a------------t
i Jaculus_jaculus.JH725527.1                             I 3 C 0
s Lagothrix_lagothricha.k141_246028                          41268  2 +    110728 G------------T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757458  2 +  30322482 a------------t
i Lemur_catta.scaffold_24                                I 3 C 0
s Leontocebus_fuscicollis.k141_2994775                        1937  2 -     13097 G------------T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1888  2 +      5940 G------------T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1519  2 -      5717 G------------T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8134  2 -     11567 G------------T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9515  2 -     12945 G------------T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6993  2 +     29618 A------------T
i Lepilemur_ankaranensis.k141_567626                     I 3 C 0
s Lepilemur_dorsalis.k141_387009                              6990  2 +     31569 A------------T
i Lepilemur_dorsalis.k141_387009                         I 3 C 0
s Lepilemur_ruficaudatus.k141_330196                          7000  2 +     24756 a------------t
i Lepilemur_ruficaudatus.k141_330196                     I 3 C 0
s Lepilemur_septentrionalis.k141_360456                       6994  2 +     16388 A------------T
i Lepilemur_septentrionalis.k141_360456                  I 3 C 0
s Lepus_americanus.LepAme_scaffold_56121                     15909  2 +     24238 a------------t
i Lepus_americanus.LepAme_scaffold_56121                 I 3 C 0
s Lophocebus_aterrimus.ctg367                               330636  2 -   1826925 A------------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8374  2 +     19643 A------------T
i Loris_lydekkerianus.k141_2031736                       I 281 C 0
s Loris_tardigradus.ctg83                                  5042035  2 -   6120653 A------------T
i Loris_tardigradus.ctg83                                I 282 C 0
s Loxodonta_africana.GL010049.1                           39078283  3 +  43346337 a-c----------t
i Loxodonta_africana.GL010049.1                          I 3 C 0
s Macaca_arctoides.k141_1757516                              42953  2 -     61512 A------------T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370614  2 -  60120075 A------------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22869  2 +     30207 A------------T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19972  2 -     24934 A------------T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22821  2 +     30527 A------------T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34011  2 -     50087 A------------T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43782  2 +     51645 A------------T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412950  2 - 187317192 a------------t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397173  2 +  25927173 a------------t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46337  2 -     62418 A------------T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22992  2 +     24253 A------------T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42813  2 +     59329 A------------T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268746  2 +    668171 A------------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19927  2 +     21031 A------------T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  524  2 +     17132 A------------T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320024  2 +  24302211 A------------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354856  2 -    752769 A------------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499005  2 +  40650429 a------------c
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46711  2 -    140813 T------------T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 3 C 0
s Mesocricetus_auratus.KB708134.1                         17427163  2 +  29670104 a------------t
i Mesocricetus_auratus.KB708134.1                        I 3 C 0
s Mico_argentatus.k141_582562                                 7897  2 +     17804 G------------T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8681  2 -     12984 G------------T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16632  2 -     26561 G------------T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982605  2 +  93316391 a------------t
i Microcebus_murinus.CM007674.1                          I 3 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43029 14 +    145209 agctaccacaGTAC
i Microgale_talazaci.MicTal_scaffold_6613                I 3 C 0
s Miopithecus_ogouensis.k141_1534655                         20051  2 -     27822 G------------T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     50396  2 -     62432 a------------t
i Mirza_zaza.k141_766280                                 I 3 C 0
s Mus_musculus.chr8                                       41682650  2 + 129401213 t------------c
i Mus_musculus.chr8                                      I 3 C 0
s Mus_spretus.CM004101.1                                  39491600  2 + 130317789 g------------c
i Mus_spretus.CM004101.1                                 I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80551  2 -     86153 A------------T
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 3 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117597  2 +    130748 g------------t
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 3 I 3
s Nasalis_larvatus.k141_1350636                              26632  2 +     34575 G------------T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           51374  2 -    132029 G------------T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7469  2 -     16345 G------------T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13354  2 +     22201 G------------T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411638  2 -  22158432 G------------T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23752  2 -     54323 G------------T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93634386  2 + 196305487 A------------T
i Nycticebus_bengalensis.LG01                            I 314 C 0
s Nycticebus_coucang.k141_3846325                             1144  2 -      3937 A------------T
i Nycticebus_coucang.k141_3846325                        I 314 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562625  2 - 199412804 A------------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 303 C 0
s Ochotona_princeps.JH802162.1                             2549303  2 -   3988456 N------------N
i Ochotona_princeps.JH802162.1                           I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90293  2 -    140218 A------------T
i Ondatra_zibethicus.OndZib_scaffold_7387                I 3 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105106  2 +    107918 A------------T
i Onychomys_torridus.OnyTor_scaffold_2487                I 3 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11389  2 -     14239 a------------t
i Orycteropus_afer.OryAfe_flattened_line_171931          I 3 C 0
s Otolemur_crassicaudatus.k141_649260                        37768  2 -     51505 a------------t
i Otolemur_crassicaudatus.k141_649260                    I 322 C 0
s Otolemur_garnettii.GL873799.1                             350771  2 +   1103335 a------------t
i Otolemur_garnettii.GL873799.1                          I 311 C 0
s Pan_troglodytes.CM009242.2                               1470462  2 - 189151597 g------------t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   240864  2 - 183742232 a------------t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7328  2 +     21308 A------------T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288367  2 -  20919399 A------------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19983  2 -     27687 A------------T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13119  2 +     16796 A------------T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19929  2 -     23640 A------------T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25388  2 +     31479 A------------T
i Perodicticus_ibeanus.k141_1921260                      I 1631 C 0
s Perodicticus_potto.k141_1854441                            17757  2 -     24908 A------------T
i Perodicticus_potto.k141_1854441                        I 1642 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37578  2 +     38305 C------------T
i Perognathus_longimembris.PerPac_flattened_line_28053   I 3 C 0
s Peromyscus_maniculatus.KI615324.1                         244751  2 +  18517816 a------------t
i Peromyscus_maniculatus.KI615324.1                      I 3 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29997  2 -     56120 G------------T
i Petromus_typicus.PetTyp_scaffold_17301                 I 3 C 0
s Piliocolobus_badius.k141_2495623                            6783  2 +      7560 G------------T
i Piliocolobus_badius.k141_2495623                       C 0 C 0
s Piliocolobus_gordonorum.k141_905727                        62491  2 -     63152 G------------T
i Piliocolobus_gordonorum.k141_905727                    C 0 C 0
s Piliocolobus_kirkii.k141_579682                            45090  2 +     45295 G------------T
i Piliocolobus_kirkii.k141_579682                        C 0 C 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2768  2 +      5735 g------------t
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             62903  2 +    207309 G------------T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          3999  2 -     25401 G------------T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29738  2 +     58159 G------------T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30014  2 +     63561 G------------T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29777  2 +     51148 G------------T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554746  2 -   4542175 C------------T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29761  2 +     51125 G------------T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6170  2 +     39866 G------------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1255  2 -      9282 G------------T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40659  2 -     87950 G------------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41052  2 -     88961 G------------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5751  2 -     39403 G------------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40703  2 +     87928 G------------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5748  2 -     60166 G------------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12684  2 -     67232 G------------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40600  2 -     90634 G------------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42068  2 +     89403 G------------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175602  2 - 189387572 g------------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190420  2 -   9816681 G------------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25246  2 +     69807 G------------T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42441  2 -     80239 g------------t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980614  2 +   4620579 g------------t
i Prolemur_simus.MPIZ01000396.1                          I 3 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564082  2 -   2598838 A------------T
i Propithecus_coquerelli.NW_012148875.1                  I 3 C 0
s Propithecus_coronatus.k141_209299                           1718  2 -      7103 a------------t
i Propithecus_coronatus.k141_209299                      I 3 C 0
s Propithecus_diadema.k141_153680                             2315  2 -     11706 a------------t
i Propithecus_diadema.k141_153680                        I 3 C 0
s Propithecus_edwardsi.k141_635656                            6051  2 -     30655 a------------t
i Propithecus_edwardsi.k141_635656                       I 3 C 0
s Propithecus_perrieri.k141_1496898                          32376  2 +     46564 a------------t
i Propithecus_perrieri.k141_1496898                      I 3 C 0
s Propithecus_tattersalli.k141_1127767                       92647  2 -     98465 a------------t
i Propithecus_tattersalli.k141_1127767                   I 3 C 0
s Propithecus_verreauxi.k141_1047036                          6284  2 +     35169 a------------t
i Propithecus_verreauxi.k141_1047036                     I 3 C 0
s Psammomys_obesus.NESX01036366.1                            34249  2 +     52041 g------------t
i Psammomys_obesus.NESX01036366.1                        I 3 C 0
s Pygathrix_cinerea.k141_1153803                             24656  2 +     91421 G------------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151149  2 -   7812017 G------------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5526  2 +     72585 G------------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020691  2 -  90668790 C------------C
i Rattus_norvegicus.chr16                                I 3 C 0
s Rhinopithecus_bieti.k119_221883                            26466  2 +     27361 g------------t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119833  2 + 195417433 g------------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234074  2 -   7961872 g------------t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               1848  2 +     27962 G------------T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1856  2 +      6077 G------------T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1875  2 +      5971 G------------T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1929  2 +      5932 G------------T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               113  2 -      4390 G------------T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389196  2 - 209938924 G------------T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1877  2 +      5979 G------------T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2243  2 -      4301 G------------T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236334  2 +   5703754 G------------T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5924  2 +     21866 G------------T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         22973  2 +     27374 G------------T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26492  2 +     58920 G------------T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12988  2 -     45317 G------------T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20646  2 -     42441 G------------T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23326  2 -     29113 G------------T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26395  2 -     48123 G------------T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46608  2 +     77746 A------------T
i Sigmodon_hispidus.SigHis_scaffold_20193                I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1866364  2 +   3870691 a------------c
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Symphalangus_syndactylus.tarseq_199                       388610  2 +   1523678 G------------T
i Symphalangus_syndactylus.tarseq_199                    C 0 I 301
s Tamandua_tetradactyla.TamTet_scaffold_224794                 716  2 +      5583 g------------t
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 3 I 3
s Tarsius_lariang.k141_1780720                                4956  2 +      6850 A------------T
i Tarsius_lariang.k141_1780720                           I 3 C 0
s Tarsius_wallacei.k141_226975                                4997  2 +     20590 A------------T
i Tarsius_wallacei.k141_226975                           I 3 C 0
s Theropithecus_gelada.CM009954.1                           350850  2 - 186847797 a------------t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22327  2 -     33621 G------------T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 3 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17840  2 -     31044 a------------t
i Tolypeutes_matacus.TolMat_scaffold_31955               I 3 I 9
s Trachypithecus_auratus.k141_1189070                        18537  2 +     26378 G------------T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31202  2 -     78344 G------------T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17858  2 +     25722 G------------T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26083  2 -     62838 G------------T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26200  2 +     46913 G------------T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7008  2 -     28527 G------------T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28022  2 -     64340 G------------T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26059  2 -     63452 G------------T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7502  2 +     22490 G------------T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          930  2 -      6147 G------------T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7905  2 -     13050 g------------t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253144  2 -   6242583 g------------t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58894  2 +     59866 G------------T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831926  2 -   4065304 a------------t
i Tupaia_chinensis.KB320699.1                            I 3 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6206  2 -     70247 a------------t
i Tupaia_tana.TupTan_flattened_line_394                  I 3 C 0
s Varecia_rubra.k141_787544                                  23256  2 -     30710 a------------t
i Varecia_rubra.k141_787544                              I 3 C 0
s Varecia_variegata.k141_289850                              22163  2 -    147434 a------------t
i Varecia_variegata.k141_289850                          I 3 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172136  2 -    224448 a------------t
i Xerus_inauris.XerIna_scaffold_2302                     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1382  2 +      2695 A------------T
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 3 C 0
e Octodon_degus.JH651603.1                                11045526 15 -  11899542 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   3030  3 +     50838 I
e Desmodus_rotundus.KZ672289.1                            11862738  1 -  20541912 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10826  3 -     19938 I
e Carollia_perspicillata.CarPer_scaffold_170178               3070  1 +      5315 I
e Zalophus_californianus.ZalCal_flattened_line_17732         26709  1 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                103052  0 -    112863 C
e Ursus_maritimus.KK499267.1                                179893  1 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              4541  1 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2544  1 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        37329  1 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1449511  1 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                196291  1 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11466701  1 -  31847680 I
e Mustela_putorius.JH418006.1                             14352768  1 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         6314  1 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             23824  3 -     74585 I
e Lycaon_pictus.CM007581.1                                41612690  1 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        811304  1 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24913955  1 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45105116  1 -  63665305 I
e Canis_lupus_familiaris.chr16                            41613535  1 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          220400  1 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     7057  1 -     23171 I
e CanFam4.chr16                                           42503421  1 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  3000  1 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20413373  1 +  29979442 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   105319  1 -    105689 I
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    477747  1 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    103587  1 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      189633  1 +    199430 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                11704  1 +     22964 I
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122813  1 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1856392  1 -   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    114095  1 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72887  1 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2911563  0 +   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18097117  1 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3535464  1 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838899  1 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49929  1 -     66298 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              893  1 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13128  0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3970520  1 +   8748460 I
e Panthera_pardus.KV860321.1                              18459800  1 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   22474  1 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100609 1191 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Noctilio_leporinus.NocLep_scaffold_7894                   125664  1 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3501  2 +      3929 I
e Myotis_lucifugus.GL429869.1                               380942  2 +   4330536 I
e Myotis_davidii.KB100139.1                                4385122  2 +   6019432 I
e Myotis_brandtii.KE162005.1                               9790760  2 +  10118263 I
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Mus_caroli.FMAL02030609.1                                    497 61 +      5579 I
e Murina_feae.MurFea_scaffold_17764                          36716  1 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   16394  1 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176869  1 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39688  1 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6360787  1 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182685  2 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Megaderma_lyra.MegLyr_scaffold_4542                       148471  1 +    207569 I
e Manis_pentadactyla.KN006162.1                             218847  1 +    317179 I
e Manis_javanica.JSZB01003497.1                             671554  1 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                221270  1 -    270270 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_26245                    29087 184 -     49555 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  67128  1 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_23202               47536  1 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1548220  1 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28646  1 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 25654  1 -     30238 I
e Felis_catus_fca126.CM031415.1                          185114550  1 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Equus_przewalskii.KK951119.1                              410174  1 -    498745 I
e Equus_caballus.CM000403.2                               21373388  1 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3039454  1 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12576372  1 +  14770903 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               4305  1 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  137256  1 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662472  1 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              2149  1 +     87169 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           769  1 -      8242 I
e Condylura_cristata.JH655891.1                           35805284  1 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17012  1 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174714  1 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810854  1 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3111  7 +     36723 AT-----TTTAA
s Acinonyx_jubatus.LLWD01001279.1                           810855  5 +   1699592 -a---a-aaa--
i Acinonyx_jubatus.LLWD01001279.1                        I 1 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413374  5 +  29979442 -a---a-aaa--
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 I 3
s Allactaga_bullata.AllBul_scaffold_20030                    16028  6 -     61208 TT--T----AAA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45506  7 +     53615 ct-----tttaa
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41446  7 +     44087 CT-----TTTAA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14086  7 -     21945 CT-----TTTAA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15762  7 +     32033 CT-----TTTAA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70215  7 -     84148 AT-----TTTAA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42448  7 -     78289 AT-----TTTAA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41894  7 +     55831 AT-----TTTAA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40336  7 -     64179 AT-----TTTAA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21982  7 -     24835 AT-----TTTAA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38965  7 +     45454 AT-----TTTAA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44663  7 +     70886 AT-----TTTAA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6788  7 +     30854 AT-----TTTAA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30927  7 +     42133 AT-----TTTAA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174715  5 -    412891 -t---a-aaa--
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 I 4
s Aotus_azarae.k141_118258                                   48737  7 -     65372 AT-----TTTAA
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42484  7 +     43593 AT-----TTTAA
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670497  7 +   5030052 at-----tttaa
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22139  7 -     23494 AT-----TTTAA
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7275  7 +      8415 AT-----TTTAA
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14061  8 -     32367 TC--TAA--GAA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18603  7 -     45910 TT-----AACAA
i Arctocebus_calabarensis.k141_1364444                   C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3001  5 -     15198 -t---a-aaa--
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 1 I 4
s Ateles_geoffroyi_b.tarseq_1536                               272727  7 +  21539123 AT-----TTTAA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8894  7 +     48076 AT-----TTTAA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4031  7 -     28759 AT-----TTTAA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31584  7 +     44353 AT-----TTTAA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46955  7 -     71267 AT-----TTTAA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21014  7 -     33135 AT-----TTTAA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4205  7 +     11645 tt-----gaaaa
i Avahi_laniger.k141_2756659                             C 0 I 3
s Avahi_peyrierasi.k141_1823318                               4211  7 -     19611 tt-----gaaaa
i Avahi_peyrierasi.k141_1823318                          C 0 I 3
s Cacajao_ayresi.k141_96119                                   5918  7 +     28062 AT-----TTTAA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41212  7 -     91139 AT-----TTTAA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18738  7 +     95584 AT-----TTTAA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18651  7 +    119600 AT-----TTTAA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8127  7 +     18648 AT-----CTTAA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7788  7 -     13885 AT-----CTTAA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16488  7 +     17162 AT-----CTTAA
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451443  7 + 189096842 AT-----CTTAA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17736  7 -     18408 AT-----CTTAA
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503422  5 +  60362399 -a---a-aaa--
i CanFam4.chr16                                          I 1 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7058  5 -     23171 -a---a-aaa--
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 1 I 3
s Canis_lupus_dingo.QKWQ01000480.1                          220401  5 +   9314153 -a---a-aaa--
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 I 3
s Canis_lupus_familiaris.chr16                            41613536  5 +  59632846 -a---a-aaa--
i Canis_lupus_familiaris.chr16                           I 1 I 3
s Canis_lupus_orion.HG994398.1                            45105117  5 -  63665305 -a---a-aaa--
i Canis_lupus_orion.HG994398.1                           I 1 I 3
s Carlito_syrichta.NW_007259797.1                           268268  7 +    496798 gt-----tttaa
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3071  5 +      5315 -t---a-aaa--
i Carollia_perspicillata.CarPer_scaffold_170178          I 1 I 4
s Cavia_aperea.AVPZ01000300.1                              4993986  6 +  23392119 tt---a---aga
i Cavia_aperea.AVPZ01000300.1                            C 0 I 9
s Cavia_porcellus.DS562891.1                               4997428  6 +  23407841 tt---a---aga
i Cavia_porcellus.DS562891.1                             C 0 I 9
s Cavia_tschudii.CavTsc_scaffold_23560                       60529  6 -     66877 TT---A---AGA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 9
s Cebuella_niveiventris.k141_592277                           3020  7 -     12580 AT-----CTTAA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40906  7 +     53515 AT-----CTTAA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369116  7 -  26074798 AT-----TTTAA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6005  7 -     34880 AT-----TTTAA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65100  7 -     89041 AT-----TTTAA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1440  7 -      1636 TT-----TTTAA
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490180  4 -  27778364 -t---a-a-a--
i Ceratotherium_simum.JH767749.1                         I 1 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17013  4 +     27315 -t---a-a-a--
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 1 I 4
s Cercocebus_atys.KQ010504.1                                138685  7 -   4669795 ct-----tttaa
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42425  7 +     47900 CT-----TTTAA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42258  7 -     44860 CT-----TTTAA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42241  7 -    148725 CT-----TTTAA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25339  7 -     40656 CT-----TTTAA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5308  7 +     20796 CT-----TTTAA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9498  7 -     17524 CT-----TTTAA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25220  7 -     34525 CT-----TTTAA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9929  7 -     25376 CT-----TTTAA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362524  7 -  39242232 CT-----TTTAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268236  7 +  21565898 CT-----TTTAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29697  7 -     45857 CT-----TTTAA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25513  7 -     32606 CT-----TTTAA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1670  7 +      8499 CT-----TTTAA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23189  7 +     70610 CT-----TTTAA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20114  7 +     36323 CT-----TTTAA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10829  7 -     19938 tt--gA-AAA--
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 3 C 0
s Cheirogaleus_major.k141_666340                             28639  7 -     33796 TT-----GAAAA
i Cheirogaleus_major.k141_666340                         C 0 I 3
s Cheirogaleus_medius.k141_759766                             3169  7 -     15404 tt-----gaaaa
i Cheirogaleus_medius.k141_759766                        C 0 I 3
s Cheracebus_lucifer.k141_2312002                             7002  7 -     32913 AT-----TTTAA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17415  7 -     40346 AT-----TTTAA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17670  7 +    216457 AT-----TTTAA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17463  7 +     39636 AT-----TTTAA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1852  7 +      5346 AC-----CTTAA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40558  7 -    112038 AT-----TTTAA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6130  7 +     34062 AT-----TTTAA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341011  7 +  18827391 CT-----TTTAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7556  7 -     44032 CT-----TTTAA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302336  7 - 135778131 CT-----TTTAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406771  7 -   2368649 ct-----tttaa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376647  7 - 200372422 ct-----tttaa
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                196  7 -     84244 ct-----tttaa
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805285  5 +  53390261 -t---a-aaa--
i Condylura_cristata.JH655891.1                          I 1 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           770  5 -      8242 -A---A-AAA--
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 1 I 4
s Cricetomys_gambianus.CriGam_scaffold_14425                 40333  6 -     83289 TT--T----AAA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112603  6 - 224834208 ttt------aaa
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2150  5 +     87169 -A---A-AAA--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 I 3
s Ctenodactylus_gundi.CteGun_scaffold_65                    642844  6 -   1526836 TT---A---AAA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1610  6 +     36344 TT---A---AGA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 8
s Dasypus_novemcinctus.JH564415.1                          2108165  5 -   2246927 tt-----aaa--
i Dasypus_novemcinctus.JH564415.1                        I 3 C 0
s Daubentonia_madagascariensis.ctg71                        290586  7 +  12879189 tt-----gaaaa
i Daubentonia_madagascariensis.ctg71                     C 0 I 3
s Desmodus_rotundus.KZ672289.1                            11862739  5 -  20541912 -t---a-aaa--
i Desmodus_rotundus.KZ672289.1                           I 1 I 4
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662473  4 -   1390856 -t---a-a-a--
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 I 4
s Diceros_bicornis.DicBicMic_scaffold_5955                  137257  4 -    198055 -t---a-a-a--
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 I 4
s Dinomys_branickii.DinBra_scaffold_10381                    96490  6 -    115145 TT---A---AGG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 2
s Dipodomys_ordii.KN672350.1                              18948380  3 -  37912305 ---------aaa
i Dipodomys_ordii.KN672350.1                             I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3327  3 -     10735 ---------AAA
i Dipodomys_stephensi.DipSte_scaffold_89095              I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7932  6 +     14636 TT---A---AGA
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 7
s Echinops_telfairi.JH980293.1                            62851957  5 - 111700974 -t---g-aaa--
i Echinops_telfairi.JH980293.1                           C 0 I 7
s Eidolon_helvum.AWHC01266696.1                               4306  5 +     19438 -a---a-aaa--
i Eidolon_helvum.AWHC01266696.1                          I 1 I 5
s Elephantulus_edwardii.JH947257.1                         9105474  2 -  10337057 tt----------
i Elephantulus_edwardii.JH947257.1                       C 0 I 7
s Ellobius_lutescens.LOEQ01008920.1                          28544  6 +    110024 ttt------aaa
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01026522.1                           10524  6 +     18970 ttt------aaa
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913956  5 +  41312741 -c---a-aaa--
i Enhydra_lutris.KZ291758.1                              I 1 I 3
s Eptesicus_fuscus.JH977646.1                             12576373  5 +  14770903 -a---a-aat--
i Eptesicus_fuscus.JH977646.1                            I 1 I 4
s Equus_asinus.JREZ01000139.1                              3039455  5 -   4378816 -t---a-aaa--
i Equus_asinus.JREZ01000139.1                            I 1 I 4
s Equus_caballus.CM000403.2                               21373389  5 +  39960074 -t---a-aaa--
i Equus_caballus.CM000403.2                              I 1 I 4
s Equus_przewalskii.KK951119.1                              410175  5 -    498745 -t---a-aaa--
i Equus_przewalskii.KK951119.1                           I 1 I 4
s Erythrocebus_patas.Contig38                               260534  7 +  21539334 CT-----TTTAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12741  7 -     24895 tt-----GAAAA
i Eulemur_albifrons.k141_51491                           C 0 I 3
s Eulemur_collaris.k141_601111                               40453  7 -     70999 tt-----GAAAA
i Eulemur_collaris.k141_601111                           C 0 I 3
s Eulemur_coronatus.k141_384460                              84412  7 +    112731 tt-----GAAAA
i Eulemur_coronatus.k141_384460                          C 0 I 3
s Eulemur_flavifrons.k141_433119                             40985  7 +     68309 tt-----GAAAA
i Eulemur_flavifrons.k141_433119                         C 0 I 3
s Eulemur_fulvus.k141_636316                                 51310  7 -     65740 TT-----GAAAA
i Eulemur_fulvus.k141_636316                             C 0 I 3
s Eulemur_macaco.k141_1562045                                21940  7 -     75513 TT-----GAAAA
i Eulemur_macaco.k141_1562045                            C 0 I 3
s Eulemur_mongoz.k141_232305                                 46133  7 -     97555 TT-----GAAAA
i Eulemur_mongoz.k141_232305                             C 0 I 3
s Eulemur_rubriventer.k141_1423786                            2860  7 +     30972 tt-----GAAAA
i Eulemur_rubriventer.k141_1423786                       C 0 I 3
s Eulemur_rufus.k141_514691                                  40583  7 -     52037 tt-----GAAAA
i Eulemur_rufus.k141_514691                              C 0 I 3
s Eulemur_sanfordi.k141_1122526                              56984  7 -    111500 tt-----GAAAA
i Eulemur_sanfordi.k141_1122526                          C 0 I 3
s Felis_catus.CM001381.2                                 186244765  5 - 206538554 -a---a-aaa--
i Felis_catus.CM001381.2                                 I 1 I 3
s Felis_catus_fca126.CM031415.1                          185114551  5 - 205367284 -a---a-aaa--
i Felis_catus_fca126.CM031415.1                          I 1 I 3
s Felis_nigripes.FelNig_flattened_line_31944                 25655  5 -     30238 -A---A-AAa--
i Felis_nigripes.FelNig_flattened_line_31944             I 1 I 3
s Galago_moholi.ctg3793                                     122622  7 -    137831 tt-----gaaaa
i Galago_moholi.ctg3793                                  C 0 I 3
s Galago_senegalensis.k141_991736                             6162  7 +     22493 tt-----gaaaa
i Galago_senegalensis.k141_991736                        C 0 I 3
s Galagoides_demidoff.k141_561628                            18215  7 -     32986 tt-----gaaaa
i Galagoides_demidoff.k141_561628                        C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_74466               17076  8 +     18121 TT--T--AAAAA
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31961  7 -     36801 T---TAA--AAA
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3448  7 -      8343 AT-----TTTAA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252459  7 - 186649187 at-----tttaa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11279  8 +     11903 TT--TAA--AAA
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12669  7 -     40692 tt-----gaaaa
i Hapalemur_alaotrensis.k141_330369                      C 0 I 3
s Hapalemur_gilberti.k141_646465                             34070  7 +     49394 tt-----gaaaa
i Hapalemur_gilberti.k141_646465                         C 0 I 3
s Hapalemur_griseus.k141_763500                              58939  7 -     66874 tt-----gaaaa
i Hapalemur_griseus.k141_763500                          C 0 I 3
s Hapalemur_meridionalis.k141_258450                          7812  7 -     42923 tt-----gaaaa
i Hapalemur_meridionalis.k141_258450                     C 0 I 3
s Hapalemur_occidentalis.k141_578367                         14812  7 -     53142 tt-----gaaaa
i Hapalemur_occidentalis.k141_578367                     C 0 I 3
s Helogale_parvula.HelPar_flattened_line_2585                28647  5 -    327341 -A---A-AAA--
i Helogale_parvula.HelPar_flattened_line_2585            I 1 I 3
s Heterocephalus_glaber.JH602082.1                         1925080  6 -  22651954 tt---a---aac
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                      1548221  5 -   1711038 -a---a-aaa--
i Hipposideros_armiger.JXIK01000431.1                    I 1 I 7
s Hipposideros_galeritus.HipGal_scaffold_23202               47537  5 +     49977 -a---a-aaa--
i Hipposideros_galeritus.HipGal_scaffold_23202           I 1 I 7
s Hoolock_leuconedys.ctg274                                    140452  7 -    630532 AT-----TTTAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67129  5 +     83186 -A---A-AAA--
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1 I 3
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69399  6 +    143317 TT---A---AGA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 7
s Hylobates_agilis.k141_1155965                               3487  7 +     12352 AT-----TTTAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10670  7 +     55766 AT-----TTTAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050266  7 + 191637585 AT-----TTTAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799144  7 +  11177569 AT-----TTTAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384798  8 +   7955117 tt-aaa---aaa
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     325  7 +     11955 TT-----GAAAA
i Indri_indri.k141_2415743                               C 0 I 3
s Jaculus_jaculus.JH725527.1                               1237211  6 +   9596543 ttt------aaa
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41270  7 +    110728 AT-----TTTAA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59847  6 -     65777 -a--aa-aaa--
i Lasiurus_borealis.LasBor_scaffold_16567                I 11 I 4
s Lemur_catta.scaffold_24                                 14757460  7 +  30322482 tt-----GAAAA
i Lemur_catta.scaffold_24                                C 0 I 3
s Leontocebus_fuscicollis.k141_2994775                        1939  7 -     13097 AT-----CTTAA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1890  7 +      5940 AT-----CTTAA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1521  7 -      5717 AT-----CTTAA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8136  7 -     11567 AT-----CTTAA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9517  7 -     12945 AT-----CTTAA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          6995  7 +     29618 TT-----GAGAA
i Lepilemur_ankaranensis.k141_567626                     C 0 I 3
s Lepilemur_dorsalis.k141_387009                              6992  7 +     31569 TT-----GAGAA
i Lepilemur_dorsalis.k141_387009                         C 0 I 3
s Lepilemur_ruficaudatus.k141_330196                          7002  7 +     24756 tt-----gagaa
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 3
s Lepilemur_septentrionalis.k141_360456                       6996  7 +     16388 TT-----GAGAA
i Lepilemur_septentrionalis.k141_360456                  C 0 I 3
s Leptonychotes_weddellii.KB714746.1                        811305  5 -   3914936 -c---a-aaa--
i Leptonychotes_weddellii.KB714746.1                     I 1 I 3
s Lepus_americanus.LepAme_scaffold_56121                     15911 11 +     24238 ttttTA-AAAAA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330638  7 -   1826925 CT-----TTTAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8376  7 +     19643 TT-----GAAAA
i Loris_lydekkerianus.k141_2031736                       C 0 I 3
s Loris_tardigradus.ctg83                                  5042037  7 -   6120653 TT-----GAAAA
i Loris_tardigradus.ctg83                                C 0 I 3
s Loxodonta_africana.GL010049.1                           39078286  6 +  43346337 tt---a-aaa--
i Loxodonta_africana.GL010049.1                          C 0 I 5
s Lycaon_pictus.CM007581.1                                41612691  5 +  59628241 -a---a-aaa--
i Lycaon_pictus.CM007581.1                               I 1 I 3
s Macaca_arctoides.k141_1757516                              42955  7 -     61512 CT-----TTTAA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370616  7 -  60120075 CT-----TTTAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22871  7 +     30207 CT-----TTTAA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19974  7 -     24934 CT-----TTTAA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22823  7 +     30527 CT-----TTTAA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34013  7 -     50087 CT-----TTTAA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43784  7 +     51645 CT-----TTTAA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412952  7 - 187317192 ct-----tttaa
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397175  7 +  25927173 ct-----tttaa
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46339  7 -     62418 CT-----TTTAA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                22994  7 +     24253 CT-----TTTAA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42815  7 +     59329 CT-----TTTAA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268748  7 +    668171 CT-----TTTAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19929  7 +     21031 CT-----TTTAA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  526  7 +     17132 CT-----TTTAA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221271  5 -    270270 -a---a-aaa--
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 1 I 5
s Mandrillus_leucophaeus.scaffold280                        320026  7 +  24302211 CT-----TTTAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354858  7 -    752769 CT-----TTTAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671555  5 -    737560 -a---a-aaa--
i Manis_javanica.JSZB01003497.1                          I 1 I 4
s Manis_pentadactyla.KN006162.1                             218848  5 +    317179 -a---a-aaa--
i Manis_pentadactyla.KN006162.1                          I 1 I 4
s Marmota_marmota.CZRN01000018.1                           7499007  8 +  40650429 tt-aaa---aaa
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148472  3 +    207569 -------aaa--
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 I 4
s Mellivora_capensis.MelCap_flattened_line_19308             23827  3 -     74585 -------aaa--
i Mellivora_capensis.MelCap_flattened_line_19308         I 3 I 3
s Meriones_unguiculatus.MerUng_scaffold_7390                 46713  1 -    140813 T-----------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 5
s Mesocricetus_auratus.KB708134.1                         17427165  6 +  29670104 tat------aaa
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 7899  7 +     17804 AT-----CTTAA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8683  7 -     12984 AT-----CTTAA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16634  7 -     26561 AT-----CTTAA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982607  7 +  93316391 tt-----gaaaa
i Microcebus_murinus.CM007674.1                          C 0 I 3
s Microgale_talazaci.MicTal_scaffold_6613                    43043  5 +    145209 -T---G-AAA--
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 7
s Micronycteris_hirsuta.MicHir_scaffold_2233                182687  5 +    200668 -t---a-aaa--
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 2 I 4
s Miniopterus_natalensis.LDJU01000034.1                    6360788  5 -   8254450 -t---a-aaa--
i Miniopterus_natalensis.LDJU01000034.1                  I 1 I 4
s Miniopterus_schreibersii.MinSch_scaffold_23309             39689  5 -     48117 -T---A-AAA--
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 1 I 4
s Miopithecus_ogouensis.k141_1534655                         20053  7 -     27822 CT-----TTTAA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6315  5 +     27589 -c---a-aaa--
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 1 I 3
s Mirza_zaza.k141_766280                                     50398  7 -     62432 tt-----gaaaa
i Mirza_zaza.k141_766280                                 C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176870  5 +    366855 -T---A-AAA--
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 I 4
s Mungos_mungo.MunMun_flattened_line_18455                   16395  5 -     63510 -A---A-AAA--
i Mungos_mungo.MunMun_flattened_line_18455               I 1 I 3
s Murina_feae.MurFea_scaffold_17764                          36717  5 +     47283 -A---A-AAA--
i Murina_feae.MurFea_scaffold_17764                      I 1 I 4
s Mus_caroli.FMAL02030609.1                                    558  3 +      5579 ---------tta
i Mus_caroli.FMAL02030609.1                              I 61 I 4222
s Mus_musculus.chr8                                       41682652  6 + 129401213 ttt------tta
i Mus_musculus.chr8                                      C 0 I 2829
s Mus_spretus.CM004101.1                                  39491602  6 + 130317789 ttt------tta
i Mus_spretus.CM004101.1                                 C 0 I 3196
s Muscardinus_avellanarius.MusAve_scaffold_12866             80553  8 -     86153 TG--TAA--GAA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14352769  5 +  14710649 -c---a-aaa--
i Mustela_putorius.JH418006.1                            I 1 I 3
s Myotis_brandtii.KE162005.1                               9790762  5 +  10118263 -a---a-aaa--
i Myotis_brandtii.KE162005.1                             I 2 I 4
s Myotis_davidii.KB100139.1                                4385124  5 +   6019432 -a---a-aaa--
i Myotis_davidii.KB100139.1                              I 2 I 4
s Myotis_lucifugus.GL429869.1                               380944  5 +   4330536 -a---a-aaa--
i Myotis_lucifugus.GL429869.1                            I 2 I 4
s Myotis_myotis.MyoMyo_scaffold_185951                        3503  5 +      3929 -a---a-aaa--
i Myotis_myotis.MyoMyo_scaffold_185951                   I 2 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117602  6 +    130748 AA---A-AAA--
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 3 C 0
s Nasalis_larvatus.k141_1350636                              26634  7 +     34575 CT-----TTTAA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466702  5 -  31847680 -c---a-aaa--
i Neomonachus_schauinslandi.NINY01007730.1               I 1 I 3
s Noctilio_leporinus.NocLep_scaffold_7894                   125665  5 -    149072 -T---A-AAA--
i Noctilio_leporinus.NocLep_scaffold_7894                I 1 I 4
s Nomascus_annamensis.k141_1771965                           51376  7 -    132029 AT-----TTTAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7471  7 -     16345 AT-----TTTAA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13356  7 +     22201 AT-----TTTAA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411640  7 -  22158432 AT-----TTTAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23754  7 -     54323 AT-----TTTAA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196292  5 +   9404916 -a---a-aaa--
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 I 3
s Nycticebus_bengalensis.LG01                             93634388  7 + 196305487 TT-----GAAAA
i Nycticebus_bengalensis.LG01                            C 0 I 3
s Nycticebus_coucang.k141_3846325                             1146  7 -      3937 TT-----GAAAA
i Nycticebus_coucang.k141_3846325                        C 0 I 3
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562627  7 - 199412804 TT-----GAAAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 3
s Ochotona_princeps.JH802162.1                             2549305  8 -   3988456 NN---N-NNNNN
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449512  5 +   2017862 -c---a-aaa--
i Odobenus_rosmarus.KB229312.1                           I 1 I 3
s Ondatra_zibethicus.OndZib_scaffold_7387                    90295  6 -    140218 TT--T----AAA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105108  5 +    107918 TA---A---A-A
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11391  6 -     14239 tt---c-aaa--
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 6
s Otocyon_megalotis.JAEUCK010005147.1                        37330  5 +    559221 -a---a-aaa--
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 I 2
s Otolemur_crassicaudatus.k141_649260                        37770  7 -     51505 tt-----gaaaa
i Otolemur_crassicaudatus.k141_649260                    C 0 I 3
s Otolemur_garnettii.GL873799.1                             350773  7 +   1103335 tt-----gaaaa
i Otolemur_garnettii.GL873799.1                          C 0 I 3
s Pan_troglodytes.CM009242.2                               1470464  7 - 189151597 at-----tttaa
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22475  5 -    230217 -a---a-aaa--
i Panthera_onca.PanOnc_flattened_line_3271               I 1 I 3
s Panthera_pardus.KV860321.1                              18459801  5 -  18783137 -a---a-aaa--
i Panthera_pardus.KV860321.1                             I 1 I 3
s Panthera_tigris.KE722367.1                               3970521  5 +   8748460 -a---a-aaa--
i Panthera_tigris.KE722367.1                             I 1 I 3
s Papio_anubis.CM001495.2                                   240866  7 - 183742232 ct-----tttaa
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7330  7 +     21308 CT-----TTTAA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288369  7 -  20919399 CT-----TTTAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19985  7 -     27687 CT-----TTTAA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13121  7 +     16796 CT-----TTTAA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19931  7 -     23640 CT-----TTTAA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13128  5 +     78924 -A---A-AAA--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 3
s Perodicticus_ibeanus.k141_1921260                          25390  7 +     31479 TT-----AACAA
i Perodicticus_ibeanus.k141_1921260                      C 0 I 2
s Perodicticus_potto.k141_1854441                            17759  7 -     24908 TT-----AACAA
i Perodicticus_potto.k141_1854441                        C 0 I 2
s Perognathus_longimembris.PerPac_flattened_line_28053       37580  6 +     38305 TT---A---AAA
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244753  6 +  18517816 ta---a---aaa
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     29999  6 -     56120 TT---A---AAT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 7
s Piliocolobus_badius.k141_2495623                            6785  7 +      7560 CT-----TTTAA
i Piliocolobus_badius.k141_2495623                       C 0 N 0
s Piliocolobus_gordonorum.k141_905727                        62493  7 -     63152 CT-----TTTAA
i Piliocolobus_gordonorum.k141_905727                    C 0 N 0
s Piliocolobus_kirkii.k141_579682                            45092  7 +     45295 CT-----TTTAA
i Piliocolobus_kirkii.k141_579682                        C 0 N 0
s Piliocolobus_tephrosceles.PDMG02034973.1                    2770  7 +      5735 ct-----tttaa
i Piliocolobus_tephrosceles.PDMG02034973.1               C 0 N 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              894  6 +     22231 -a--aa-aat--
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 1 I 4
s Pithecia_albicans.k141_1239476                             62905  7 +    207309 AT-----TTTTA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4001  7 -     25401 AT-----TTTAA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29740  7 +     58159 AT-----TTTAA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30016  7 +     63561 AT-----TTTAA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29779  7 +     51148 AT-----TTTAA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554748  7 -   4542175 AT-----TTTAA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29763  7 +     51125 AT-----TTTAA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6172  7 +     39866 AT-----TTTAC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1257  7 -      9282 AT-----TTTAC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40661  7 -     87950 AT-----TTTAC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41054  7 -     88961 AT-----TTTAC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5753  7 -     39403 AT-----TTTAC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40705  7 +     87928 AT-----TTTAC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5750  7 -     60166 AT-----TTTAC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12686  7 -     67232 AT-----TTTAC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40602  7 -     90634 AT-----TTTAC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42070  7 +     89403 AT-----TTTAC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175604  7 - 189387572 at-----tttaa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190422  7 -   9816681 AT-----TTTAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25248  7 +     69807 CT-----TTTAA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42443  7 -     80239 ct-----tttaa
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980616  7 +   4620579 tt-----gaaaa
i Prolemur_simus.MPIZ01000396.1                          C 0 I 3
s Propithecus_coquerelli.NW_012148875.1                    1564084  7 -   2598838 TT-----GAAAA
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 3
s Propithecus_coronatus.k141_209299                           1720  7 -      7103 tt-----gaaaa
i Propithecus_coronatus.k141_209299                      C 0 I 3
s Propithecus_diadema.k141_153680                             2317  7 -     11706 tt-----gaaaa
i Propithecus_diadema.k141_153680                        C 0 I 3
s Propithecus_edwardsi.k141_635656                            6053  7 -     30655 tt-----gaaaa
i Propithecus_edwardsi.k141_635656                       C 0 I 3
s Propithecus_perrieri.k141_1496898                          32378  7 +     46564 tt-----GAAAA
i Propithecus_perrieri.k141_1496898                      C 0 I 3
s Propithecus_tattersalli.k141_1127767                       92649  7 -     98465 tt-----gaaaa
i Propithecus_tattersalli.k141_1127767                   C 0 I 3
s Propithecus_verreauxi.k141_1047036                          6286  7 +     35169 tt-----gaaaa
i Propithecus_verreauxi.k141_1047036                     C 0 I 3
s Psammomys_obesus.NESX01036366.1                            34251  1 +     52041 t-----------
i Psammomys_obesus.NESX01036366.1                        C 0 I 5
s Pteronotus_parnellii.KE847780.1                            49930  5 -     66298 -a---a-aaa--
i Pteronotus_parnellii.KE847780.1                        I 1 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2545  5 -     18639 -c---a-aaa--
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 1 I 3
s Pteropus_alecto.KB030862.1                               5838900  4 -  28871421 -a---a--aa--
i Pteropus_alecto.KB030862.1                             I 1 I 5
s Pteropus_vampyrus.KN525825.1                             3535465  5 -   4952924 -a---a-aaa--
i Pteropus_vampyrus.KN525825.1                           I 1 I 5
s Puma_concolor.QAVW01001104.1                            18097118  5 +  38429054 -a---a-aaa--
i Puma_concolor.QAVW01001104.1                           I 1 I 3
s Pygathrix_cinerea.k141_1153803                             24658  7 +     91421 CT-----TTTAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151151  7 -   7812017 CT-----TTTAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5528  7 +     72585 CT-----TTTAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020693  6 -  90668790 TT--T----gaa
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911563  2 +   3329780 --------ca--
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 7
s Rhinopithecus_bieti.k119_221883                            26468  7 +     27361 ct-----tttaa
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119835  7 + 195417433 ct-----tttaa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234076  7 -   7961872 ct-----tttaa
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72888  5 -    116970 -t---a-aaa--
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 1 I 2
s Saguinus_bicolor.k141_1429097                               1850  7 +     27962 AC-----CTTAA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1858  7 +      6077 AC-----CTTAA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1877  7 +      5971 AT-----CTTAA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1931  7 +      5932 AT-----CTTAG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               115  7 -      4390 AT-----CTTAA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389198  7 - 209938924 CC-----CTTAA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1879  7 +      5979 AT-----CTTAA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2245  7 -      4301 AC-----CTTAA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236336  7 +   5703754 AT-----TTTAA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5926  7 +     21866 AT-----TTTAA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114096  5 +    313613 -t---a-aaa--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 I 4
s Semnopithecus_entellus.k141_158471                         22975  7 +     27374 CT-----TTTAA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26494  7 +     58920 CT-----TTTAA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12990  7 -     45317 CT-----TTTAA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20648  7 -     42441 CT-----TTTAA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23328  7 -     29113 CT-----TTTAA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26397  7 -     48123 CT-----TTTAA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46610  8 +     77746 TT-TTT---TAA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856393  5 -   1910179 -t---a-aaa--
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 I 2
s Spermophilus_dauricus.KZ294078.1                         1866366  8 +   3870691 tt-aaa---aaa
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4542  5 -     97271 -c---a-aaa--
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 I 3
s Suricata_suricatta.SurSur_flattened_line_6629             122814  5 +    196729 -A---A-AAA--
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 I 3
s Symphalangus_syndactylus.tarseq_199                       388913  7 +   1523678 AT-----TTTAA
i Symphalangus_syndactylus.tarseq_199                    I 301 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11705  5 +     22964 -tt----aaa--
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 1 I 4
s Tamandua_tetradactyla.TamTet_scaffold_224794                 721  7 +      5583 AA--AA-AAA--
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 3 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189634  4 +    199430 -T---A-A-A--
i Tapirus_indicus.TapInd_scaffold_7432                   I 1 I 4
s Tapirus_terrestris.TapTer_scaffold_755                    103588  4 -    539355 -T---A-A-A--
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 I 4
s Tarsius_lariang.k141_1780720                                4958  7 +      6850 TT-----TTTAA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                4999  7 +     20590 TT-----TTTAA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350852  7 - 186847797 ct-----tttaa
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22329  6 -     33621 TT---A---AAT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 6
s Tolypeutes_matacus.TolMat_scaffold_31955                   17851  7 -     31044 ttt--a-aaa--
i Tolypeutes_matacus.TolMat_scaffold_31955               I 9 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477748  5 -    610378 -t---a-aaa--
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 I 4
s Trachypithecus_auratus.k141_1189070                        18539  7 +     26378 CT-----TTTAA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31204  7 -     78344 CT-----TTTAA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17860  7 +     25722 CT-----TTTAA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26085  7 -     62838 CT-----TTTAA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26202  7 +     46913 CT-----TTTAA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7010  7 -     28527 CT-----TTTAA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28024  7 -     64340 CT-----TTTAA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26061  7 -     63452 CT-----TTTAA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7504  7 +     22490 CT-----TTTAA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          932  7 -      6147 CT-----TTTAA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7907  7 -     13050 ct-----tttaa
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253146  7 -   6242583 ct-----tttaa
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58896  7 +     59866 CT-----TTTAA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831928  7 -   4065304 t-t----aaaaa
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6208  7 -     70247 t-t----aaaaa
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105320  5 -    105689 -A---A-AAA--
i Uropsilus_gracilis.UroGra_scaffold_7153                I 1 I 4
s Ursus_maritimus.KK499267.1                                179894  5 +   5085361 -a---a-aaa--
i Ursus_maritimus.KK499267.1                             I 1 I 3
s Varecia_rubra.k141_787544                                  23258  7 -     30710 tt-----GAAAA
i Varecia_rubra.k141_787544                              C 0 I 3
s Varecia_variegata.k141_289850                              22165  7 -    147434 tt-----GAAAA
i Varecia_variegata.k141_289850                          C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_12041                103052  5 -    112863 -a---a-aaa--
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 3
s Xerus_inauris.XerIna_scaffold_2302                        172138  8 -    224448 ttt-aa---aaa
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26710  5 -     86975 -c---a-aaa--
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 I 3
s Zapus_hudsonius.ZapHud_scaffold_230229                      1384  6 +      2695 TT--T----AAA
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Octodon_degus.JH651603.1                                11045526 15 -  11899542 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   3030  3 +     50838 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100609 1191 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3118 1 +     36723 A
s Allactaga_bullata.AllBul_scaffold_20030                    16034 1 -     61208 A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45513 1 +     53615 a
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41453 1 +     44087 A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14093 1 -     21945 A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15769 1 +     32033 A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70222 1 -     84148 A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42455 1 -     78289 A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41901 1 +     55831 A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40343 1 -     64179 A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21989 1 -     24835 A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38972 1 +     45454 A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44670 1 +     70886 A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6795 1 +     30854 A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30934 1 +     42133 A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_118258                                   48744 1 -     65372 A
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42491 1 +     43593 A
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670504 1 +   5030052 a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22146 1 -     23494 A
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7282 1 +      8415 A
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14069 1 -     32367 A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18612 1 -     45910 A
i Arctocebus_calabarensis.k141_1364444                   I 2 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272734 1 +  21539123 A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8901 1 +     48076 A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4038 1 -     28759 A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31591 1 +     44353 A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46962 1 -     71267 A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21021 1 -     33135 A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4215 1 +     11645 a
i Avahi_laniger.k141_2756659                             I 3 C 0
s Avahi_peyrierasi.k141_1823318                               4221 1 -     19611 a
i Avahi_peyrierasi.k141_1823318                          I 3 C 0
s Cacajao_ayresi.k141_96119                                   5925 1 +     28062 A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41219 1 -     91139 A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18745 1 +     95584 A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18658 1 +    119600 A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8134 1 +     18648 A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7795 1 -     13885 A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16495 1 +     17162 A
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451450 1 + 189096842 A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17743 1 -     18408 A
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s Cebuella_niveiventris.k141_592277                           3027 1 -     12580 A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40913 1 +     53515 A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369123 1 -  26074798 A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6012 1 -     34880 A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65107 1 -     89041 A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1447 1 -      1636 A
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138692 1 -   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42432 1 +     47900 A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42265 1 -     44860 A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42248 1 -    148725 A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25346 1 -     40656 A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5315 1 +     20796 A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9505 1 -     17524 A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25227 1 -     34525 A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9936 1 -     25376 A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362531 1 -  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268243 1 +  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29704 1 -     45857 A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25520 1 -     32606 A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1677 1 +      8499 A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23196 1 +     70610 A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20121 1 +     36323 A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             28649 1 -     33796 A
i Cheirogaleus_major.k141_666340                         I 3 C 0
s Cheirogaleus_medius.k141_759766                             3179 1 -     15404 a
i Cheirogaleus_medius.k141_759766                        I 3 C 0
s Cheracebus_lucifer.k141_2312002                             7009 1 -     32913 A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17422 1 -     40346 A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17677 1 +    216457 A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17470 1 +     39636 A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1859 1 +      5346 A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40565 1 -    112038 A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6137 1 +     34062 A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341018 1 +  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7563 1 -     44032 A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302343 1 - 135778131 A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406778 1 -   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376654 1 - 200372422 a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                203 1 -     84244 a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40339 1 -     83289 G
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112609 1 - 224834208 a
i Cricetulus_griseus.LT883664.1                          C 0 I 190
s Ctenodactylus_gundi.CteGun_scaffold_65                    642850 1 -   1526836 A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290596 1 +  12879189 a
i Daubentonia_madagascariensis.ctg71                     I 3 C 0
s Dipodomys_ordii.KN672350.1                              18948383 1 -  37912305 a
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3330 1 -     10735 A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28551 1 +    110024 a
i Ellobius_lutescens.LOEQ01008920.1                      I 1 I 187
s Ellobius_talpinus.LOJH01026522.1                           10530 1 +     18970 a
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 185
s Erythrocebus_patas.Contig38                               260541 1 +  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12751 1 -     24895 A
i Eulemur_albifrons.k141_51491                           I 3 C 0
s Eulemur_collaris.k141_601111                               40463 1 -     70999 A
i Eulemur_collaris.k141_601111                           I 3 C 0
s Eulemur_coronatus.k141_384460                              84422 1 +    112731 A
i Eulemur_coronatus.k141_384460                          I 3 C 0
s Eulemur_flavifrons.k141_433119                             40995 1 +     68309 A
i Eulemur_flavifrons.k141_433119                         I 3 C 0
s Eulemur_fulvus.k141_636316                                 51320 1 -     65740 A
i Eulemur_fulvus.k141_636316                             I 3 C 0
s Eulemur_macaco.k141_1562045                                21950 1 -     75513 A
i Eulemur_macaco.k141_1562045                            I 3 C 0
s Eulemur_mongoz.k141_232305                                 46143 1 -     97555 A
i Eulemur_mongoz.k141_232305                             I 3 C 0
s Eulemur_rubriventer.k141_1423786                            2870 1 +     30972 A
i Eulemur_rubriventer.k141_1423786                       I 3 C 0
s Eulemur_rufus.k141_514691                                  40593 1 -     52037 A
i Eulemur_rufus.k141_514691                              I 3 C 0
s Eulemur_sanfordi.k141_1122526                              56994 1 -    111500 A
i Eulemur_sanfordi.k141_1122526                          I 3 C 0
s Galago_moholi.ctg3793                                     122632 1 -    137831 a
i Galago_moholi.ctg3793                                  I 3 C 0
s Galago_senegalensis.k141_991736                             6172 1 +     22493 a
i Galago_senegalensis.k141_991736                        I 3 C 0
s Galagoides_demidoff.k141_561628                            18225 1 -     32986 a
i Galagoides_demidoff.k141_561628                        I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17084 1 +     18121 A
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31968 1 -     36801 G
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3455 1 -      8343 A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252466 1 - 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11287 1 +     11903 G
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12679 1 -     40692 a
i Hapalemur_alaotrensis.k141_330369                      I 3 C 0
s Hapalemur_gilberti.k141_646465                             34080 1 +     49394 a
i Hapalemur_gilberti.k141_646465                         I 3 C 0
s Hapalemur_griseus.k141_763500                              58949 1 -     66874 a
i Hapalemur_griseus.k141_763500                          I 3 C 0
s Hapalemur_meridionalis.k141_258450                          7822 1 -     42923 a
i Hapalemur_meridionalis.k141_258450                     I 3 C 0
s Hapalemur_occidentalis.k141_578367                         14822 1 -     53142 a
i Hapalemur_occidentalis.k141_578367                     I 3 C 0
s Hoolock_leuconedys.ctg274                                    140459 1 -    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               3494 1 +     12352 A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10677 1 +     55766 A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050273 1 + 191637585 A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799151 1 +  11177569 A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384806 1 +   7955117 a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     335 1 +     11955 A
i Indri_indri.k141_2415743                               I 3 C 0
s Jaculus_jaculus.JH725527.1                               1237217 1 +   9596543 a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41277 1 +    110728 A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757470 1 +  30322482 A
i Lemur_catta.scaffold_24                                I 3 C 0
s Leontocebus_fuscicollis.k141_2994775                        1946 1 -     13097 A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1897 1 +      5940 A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1528 1 -      5717 A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8143 1 -     11567 A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9524 1 -     12945 A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7005 1 +     29618 A
i Lepilemur_ankaranensis.k141_567626                     I 3 C 0
s Lepilemur_dorsalis.k141_387009                              7002 1 +     31569 A
i Lepilemur_dorsalis.k141_387009                         I 3 C 0
s Lepilemur_ruficaudatus.k141_330196                          7012 1 +     24756 a
i Lepilemur_ruficaudatus.k141_330196                     I 3 C 0
s Lepilemur_septentrionalis.k141_360456                       7006 1 +     16388 A
i Lepilemur_septentrionalis.k141_360456                  I 3 C 0
s Lepus_americanus.LepAme_scaffold_56121                     15922 1 +     24238 A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330645 1 -   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8386 1 +     19643 A
i Loris_lydekkerianus.k141_2031736                       I 3 C 0
s Loris_tardigradus.ctg83                                  5042047 1 -   6120653 A
i Loris_tardigradus.ctg83                                I 3 C 0
s Macaca_arctoides.k141_1757516                              42962 1 -     61512 A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370623 1 -  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22878 1 +     30207 A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19981 1 -     24934 A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22830 1 +     30527 A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34020 1 -     50087 A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43791 1 +     51645 A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412959 1 - 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397182 1 +  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46346 1 -     62418 A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23001 1 +     24253 A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42822 1 +     59329 A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268755 1 +    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19936 1 +     21031 A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  533 1 +     17132 A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320033 1 +  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354865 1 -    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499015 1 +  40650429 a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427171 1 +  29670104 a
i Mesocricetus_auratus.KB708134.1                        C 0 I 188
s Mico_argentatus.k141_582562                                 7906 1 +     17804 A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8690 1 -     12984 A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16641 1 -     26561 A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982617 1 +  93316391 a
i Microcebus_murinus.CM007674.1                          I 3 C 0
s Miopithecus_ogouensis.k141_1534655                         20060 1 -     27822 A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     50408 1 -     62432 a
i Mirza_zaza.k141_766280                                 I 3 C 0
s Mus_caroli.FMAL02030609.1                                   4783 1 +      5579 g
i Mus_caroli.FMAL02030609.1                              I 4222 C 0
s Mus_musculus.chr8                                       41685487 1 + 129401213 g
i Mus_musculus.chr8                                      I 2829 C 0
s Mus_spretus.CM004101.1                                  39494804 1 + 130317789 g
i Mus_spretus.CM004101.1                                 I 3196 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80561 1 -     86153 G
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Nasalis_larvatus.k141_1350636                              26641 1 +     34575 A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           51383 1 -    132029 A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7478 1 -     16345 A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13363 1 +     22201 A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411647 1 -  22158432 A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23761 1 -     54323 A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93634398 1 + 196305487 A
i Nycticebus_bengalensis.LG01                            I 3 C 0
s Nycticebus_coucang.k141_3846325                             1156 1 -      3937 A
i Nycticebus_coucang.k141_3846325                        I 3 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562637 1 - 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 3 C 0
s Ochotona_princeps.JH802162.1                             2549313 1 -   3988456 N
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90301 1 -    140218 A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 191
s Onychomys_torridus.OnyTor_scaffold_2487                   105113 1 +    107918 A
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 I 182
s Otolemur_crassicaudatus.k141_649260                        37780 1 -     51505 a
i Otolemur_crassicaudatus.k141_649260                    I 3 C 0
s Otolemur_garnettii.GL873799.1                             350783 1 +   1103335 a
i Otolemur_garnettii.GL873799.1                          I 3 C 0
s Pan_troglodytes.CM009242.2                               1470471 1 - 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   240873 1 - 183742232 a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7337 1 +     21308 A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288376 1 -  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19992 1 -     27687 A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13128 1 +     16796 A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19938 1 -     23640 A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25399 1 +     31479 A
i Perodicticus_ibeanus.k141_1921260                      I 2 T 1332
s Perodicticus_potto.k141_1854441                            17768 1 -     24908 A
i Perodicticus_potto.k141_1854441                        I 2 T 1342
s Perognathus_longimembris.PerPac_flattened_line_28053       37586 1 +     38305 A
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244759 1 +  18517816 a
i Peromyscus_maniculatus.KI615324.1                      C 0 I 182
s Piliocolobus_badius.k141_2704958                             156 1 +     55023 A
i Piliocolobus_badius.k141_2704958                       N 0 C 0
s Piliocolobus_kirkii.k141_1310104                             157 1 +     40849 A
i Piliocolobus_kirkii.k141_1310104                       N 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  251905 1 +  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               N 0 C 0
s Pithecia_albicans.k141_1239476                             62912 1 +    207309 A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4008 1 -     25401 A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29747 1 +     58159 A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30023 1 +     63561 A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29786 1 +     51148 A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554755 1 -   4542175 A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29770 1 +     51125 A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6179 1 +     39866 A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1264 1 -      9282 A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40668 1 -     87950 A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41061 1 -     88961 A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5760 1 -     39403 A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40712 1 +     87928 A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5757 1 -     60166 A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12693 1 -     67232 A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40609 1 -     90634 A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42077 1 +     89403 A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175611 1 - 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190429 1 -   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25255 1 +     69807 A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42450 1 -     80239 a
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980626 1 +   4620579 a
i Prolemur_simus.MPIZ01000396.1                          I 3 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564094 1 -   2598838 a
i Propithecus_coquerelli.NW_012148875.1                  I 3 C 0
s Propithecus_coronatus.k141_209299                           1730 1 -      7103 a
i Propithecus_coronatus.k141_209299                      I 3 C 0
s Propithecus_diadema.k141_153680                             2327 1 -     11706 a
i Propithecus_diadema.k141_153680                        I 3 C 0
s Propithecus_edwardsi.k141_635656                            6063 1 -     30655 a
i Propithecus_edwardsi.k141_635656                       I 3 C 0
s Propithecus_perrieri.k141_1496898                          32388 1 +     46564 A
i Propithecus_perrieri.k141_1496898                      I 3 C 0
s Propithecus_tattersalli.k141_1127767                       92659 1 -     98465 a
i Propithecus_tattersalli.k141_1127767                   I 3 C 0
s Propithecus_verreauxi.k141_1047036                          6296 1 +     35169 a
i Propithecus_verreauxi.k141_1047036                     I 3 C 0
s Pygathrix_cinerea.k141_1153803                             24665 1 +     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151158 1 -   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5535 1 +     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020699 1 -  90668790 a
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26475 1 +     27361 a
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119842 1 + 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234083 1 -   7961872 a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               1857 1 +     27962 A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1865 1 +      6077 A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1884 1 +      5971 A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1938 1 +      5932 A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               122 1 -      4390 A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389205 1 - 209938924 A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1886 1 +      5979 A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2252 1 -      4301 A
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236343 1 +   5703754 A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5933 1 +     21866 A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         22982 1 +     27374 A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26501 1 +     58920 A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12997 1 -     45317 A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20655 1 -     42441 A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23335 1 -     29113 A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26404 1 -     48123 A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46618 1 +     77746 A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 192
s Spermophilus_dauricus.KZ294078.1                         1866374 1 +   3870691 a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       388920 1 +   1523678 A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                4965 1 +      6850 A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5006 1 +     20590 A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350859 1 - 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18546 1 +     26378 A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31211 1 -     78344 A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17867 1 +     25722 A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26092 1 -     62838 A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26209 1 +     46913 A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7017 1 -     28527 A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28031 1 -     64340 A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26068 1 -     63452 A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7511 1 +     22490 A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          939 1 -      6147 A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7914 1 -     13050 a
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253153 1 -   6242583 a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58903 1 +     59866 A
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831935 1 -   4065304 a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6215 1 -     70247 a
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  23268 1 -     30710 A
i Varecia_rubra.k141_787544                              I 3 C 0
s Varecia_variegata.k141_289850                              22175 1 -    147434 A
i Varecia_variegata.k141_289850                          I 3 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172146 1 -    224448 a
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1390 1 +      2695 A
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              22335 6 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     30005 7 -     56120 I
e Octodon_degus.JH651603.1                                11045526 15 -  11899542 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69405 7 +    143317 I
e Heterocephalus_glaber.JH602082.1                         1925086 2 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  7938 7 +     14636 I
e Dinomys_branickii.DinBra_scaffold_10381                    96496 2 -    115145 I
e Cuniculus_paca.CunPac_flattened_line_7025                   1616 8 +     36344 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   3030 3 +     50838 I
e Cavia_tschudii.CavTsc_scaffold_23560                       60535 9 -     66877 I
e Cavia_porcellus.DS562891.1                               4997434 9 +  23407841 I
e Cavia_aperea.AVPZ01000300.1                              4993992 9 +  23392119 I
e Microgale_talazaci.MicTal_scaffold_6613                    43048 7 +    145209 I
e Echinops_telfairi.JH980293.1                            62851962 7 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              11397 6 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9105476 7 -  10337057 I
e Desmodus_rotundus.KZ672289.1                            11862744 4 -  20541912 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   17858 0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2108170 0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            10836 0 -     19938 C
e Carollia_perspicillata.CarPer_scaffold_170178               3076 4 +      5315 I
e Zalophus_californianus.ZalCal_flattened_line_17732         26715 3 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                103057 3 -    112863 I
e Ursus_maritimus.KK499267.1                                179899 3 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              4547 3 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          2550 3 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        37335 2 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1449517 3 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                196297 3 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11466707 3 -  31847680 I
e Mustela_putorius.JH418006.1                             14352774 3 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         6320 3 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             23830 3 -     74585 I
e Lycaon_pictus.CM007581.1                                41612696 3 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        811310 3 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24913961 3 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45105122 3 -  63665305 I
e Canis_lupus_familiaris.chr16                            41613541 3 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          220406 3 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     7063 3 -     23171 I
e CanFam4.chr16                                           42503427 3 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  3006 4 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20413379 3 +  29979442 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_7153                   105325 4 -    105689 I
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    477753 4 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    103592 4 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      189638 4 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                 728 0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                11710 4 +     22964 I
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             122819 3 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1856398 2 -   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    114101 4 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72893 2 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2911565 7 +   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18097123 3 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3535470 5 -   4952924 I
e Pteropus_alecto.KB030862.1                               5838904 5 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            49935 4 -     66298 I
e Psammomys_obesus.NESX01036366.1                            34252 5 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974              900 4 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13133 3 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3970526 3 +   8748460 I
e Panthera_pardus.KV860321.1                              18459806 3 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   22480 3 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100609 1191 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Noctilio_leporinus.NocLep_scaffold_7894                   125670 4 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117608 0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_185951                        3508 4 +      3929 I
e Myotis_lucifugus.GL429869.1                               380949 4 +   4330536 I
e Myotis_davidii.KB100139.1                                4385129 4 +   6019432 I
e Myotis_brandtii.KE162005.1                               9790767 4 +  10118263 I
e Mus_pahari.LT608297.1                                   58215754 5 +  89631738 I
e Murina_feae.MurFea_scaffold_17764                          36722 4 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   16400 3 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 176875 4 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             39694 4 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6360793 4 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                182692 4 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 46714 5 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       148475 4 +    207569 I
e Manis_pentadactyla.KN006162.1                             218853 4 +    317179 I
e Manis_javanica.JSZB01003497.1                             671560 4 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                221276 5 -    270270 I
e Loxodonta_africana.GL010049.1                           39078292 5 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    59853 4 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  67134 3 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_23202               47542 7 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1548226 7 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                28652 3 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 25660 3 -     30238 I
e Felis_catus_fca126.CM031415.1                          185114556 3 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Equus_przewalskii.KK951119.1                              410180 4 -    498745 I
e Equus_caballus.CM000403.2                               21373394 4 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3039460 4 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12576378 4 +  14770903 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               4311 5 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  137261 4 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  662477 4 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              2155 3 +     87169 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505           775 4 -      8242 I
e Condylura_cristata.JH655891.1                           35805290 4 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17017 4 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Carlito_syrichta.NW_007259797.1                           268275 0 +    496798 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      174720 4 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962 9 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           810860 3 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3119  9 +     36723 AT------ATAT-T-------CT
s Acinonyx_jubatus.LLWD01001279.1                           810863  4 +   1699592 -----------t-t-------tt
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413382  4 +  29979442 -----------t-t-------ct
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16035  8 -     61208 T-TCCT-----T-T-------A-
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45514  9 +     53615 at------atat-t-------ct
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41454  9 +     44087 AT------ATAT-T-------CT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14094  9 -     21945 AT------ATAT-T-------CT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15770  9 +     32033 AT------ATAT-T-------CT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70223  9 -     84148 AT------ATAT-T-------CT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42456  9 -     78289 AT------ATAT-T-------CT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41902  9 +     55831 AT------ATAT-T-------CT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40344  9 -     64179 AT------ATAT-T-------CT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21990  9 -     24835 AT------ATAT-T-------CT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38973  9 +     45454 AT------ATAT-T-------CT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44671  9 +     70886 AT------ATAT-T-------CT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6796  9 +     30854 AT------ATAT-T-------CT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30935  9 +     42133 AT------ATAT-T-------CT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174724  4 -    412891 -----------t-t-------tt
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 C 0
s Aotus_azarae.k141_118258                                   48745  9 -     65372 AT------ATAT-T-------CT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42492  9 +     43593 AT------ATAT-T-------CT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670505  9 +   5030052 at------atat-t-------ct
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22147  9 -     23494 AT------ATAT-T-------CT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7283  9 +      8415 AT------ATAT-T-------CT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14070  1 -     32367 T----------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 4
s Arctocebus_calabarensis.k141_1364444                       18613  5 -     45910 A----------T-T-------AT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3010  4 -     15198 -----------t-t-------tt
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 4 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272735  9 +  21539123 AT------ATAT-T-------GT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8902  9 +     48076 AT------ATAT-T-------GT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4039  9 -     28759 AT------ATAT-T-------GT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31592  9 +     44353 AT------ATAT-T-------GT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46963  9 -     71267 AT------ATAT-T-------GT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21022  9 -     33135 AT------ATAT-T-------GT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4216  8 +     11645 a----ttc---t-t-------ct
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4222  8 -     19611 a----ttc---t-t-------ct
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5926  9 +     28062 AT------ATAT-T-------CT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41220  9 -     91139 AT------ATAT-T-------CT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18746  9 +     95584 AT------ATAT-T-------CT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18659  9 +    119600 AT------ATAT-T-------CT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8135  9 +     18648 AT------ATAT-T-------CT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7796  9 -     13885 AT------ATAT-T-------CT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16496  9 +     17162 AT------ATAT-T-------CT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451451  9 + 189096842 AT------ATAT-T-------CT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17744  9 -     18408 AT------ATAT-T-------CT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503430  4 +  60362399 -----------t-t-------tt
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7066  4 -     23171 -----------t-t-------tt
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220409  4 +   9314153 -----------t-t-------tt
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            41613544  4 +  59632846 -----------t-t-------tt
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            45105125  4 -  63665305 -----------t-t-------tt
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Carlito_syrichta.NW_007259797.1                           268275  8 +    496798 aa------ata--t-------gg
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_170178               3080  4 +      5315 -----------t-t-------tt
i Carollia_perspicillata.CarPer_scaffold_170178          I 4 C 0
s Cavia_aperea.AVPZ01000300.1                              4994001  3 +  23392119 -----------t-t-------c-
i Cavia_aperea.AVPZ01000300.1                            I 9 C 0
s Cavia_porcellus.DS562891.1                               4997443  3 +  23407841 -----------t-t-------t-
i Cavia_porcellus.DS562891.1                             I 9 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60544  3 -     66877 -----------T-T-------T-
i Cavia_tschudii.CavTsc_scaffold_23560                   I 9 C 0
s Cebuella_niveiventris.k141_592277                           3028  9 -     12580 AT------ATAT-T-------CT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40914  9 +     53515 AT------ATAT-T-------CT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369124  9 -  26074798 AT------ATAT-T-------CT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6013  9 -     34880 AT------ATAT-T-------CT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65108  9 -     89041 AT------ATAT-T-------CT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1448  8 -      1636 AA------ATA--T-------GG
i Cephalopachus_bancanus.k141_72622                      C 0 I 1
s Ceratotherium_simum.JH767749.1                          15490188  4 -  27778364 -----------c-t-------tc
i Ceratotherium_simum.JH767749.1                         I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17021  4 +     27315 -----------c-t-------tc
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 4 C 0
s Cercocebus_atys.KQ010504.1                                138693  9 -   4669795 at------atat-t-------ct
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42433  9 +     47900 AT------ATAT-T-------CT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42266  9 -     44860 AT------ATAT-T-------CT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42249  9 -    148725 AT------ATAT-T-------CT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25347  9 -     40656 AT------ATAT-T-------CT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5316  9 +     20796 AT------ATAT-T-------CT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9506  9 -     17524 AT------ATAT-T-------CT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25228  9 -     34525 AT------ATAT-T-------CT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9937  9 -     25376 AT------ATAT-T-------CT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362532  9 -  39242232 AT------ATAT-T-------TT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268244  9 +  21565898 AT------ATAT-T-------CT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29705  9 -     45857 AT------ATAT-T-------CT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25521  9 -     32606 AT------ATAT-T-------CT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1678  9 +      8499 AT------ATAT-T-------CT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23197  9 +     70610 AT------ATAT-T-------CT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20122  9 +     36323 AG------ATAT-T-------CT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10836  4 -     19938 -----------T-T-------CT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28650  8 -     33796 A-TT---C---T-T-------CT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3180  8 -     15404 a----ttc---t-t-------ct
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7010  9 -     32913 AT------CTGT-T-------CT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17423  9 -     40346 AT------CTGT-T-------CT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17678  9 +    216457 AT------CTGT-T-------CT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17471  9 +     39636 AT------CTGT-T-------CT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1860  9 +      5346 AT------ATAT-C-------CT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40566  9 -    112038 AT------ATAT-T-------CT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6138  9 +     34062 AT------ATAT-T-------CT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341019  9 +  18827391 AT------ATAT-T-------CT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7564  9 -     44032 AT------ATAT-T-------CT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302344  9 - 135778131 GT------ATAT-T-------Ct
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406779  9 -   2368649 at------atac-t-------ct
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376655  9 - 200372422 at------atac-t-------ct
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                204  9 -     84244 at------atac-t-------ct
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805294  4 +  53390261 -----------t-t-------ct
i Condylura_cristata.JH655891.1                          I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           779  4 -      8242 -----------T-T-------CT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 4 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40340  7 -     83289 T-T---GC---A-T-------C-
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112800  5 - 224834208 t-TTT------G-----------
i Cricetulus_griseus.LT883664.1                          I 190 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2158  4 +     87169 -----------T-T-------CA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642851  7 -   1526836 G-TT---C---T-T-------C-
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3033  3 +     50838 -----------T-T-------C-
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 3 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1624  3 +     36344 -----------T-T-------C-
i Cuniculus_paca.CunPac_flattened_line_7025              I 8 C 0
s Dasypus_novemcinctus.JH564415.1                          2108170  4 -   2246927 -----------t-t-------ct
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290597  8 +  12879189 a----ttc---t-g-------ct
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862748  4 -  20541912 -----------t-t-------ct
i Desmodus_rotundus.KZ672289.1                           I 4 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662481  4 -   1390856 -----------a-t-------tt
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 4 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137265  4 -    198055 -----------c-t-------tc
i Diceros_bicornis.DicBicMic_scaffold_5955               I 4 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96498  4 -    115145 -----------TTT-------T-
i Dinomys_branickii.DinBra_scaffold_10381                I 2 C 0
s Dipodomys_ordii.KN672350.1                              18948384  5 -  37912305 a------a---t-t-------c-
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3331  5 -     10735 A------A---T-T-------C-
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7945  3 +     14636 -----------T-T-------C-
i Dolichotis_patagonum.DolPat_scaffold_80628             I 7 C 0
s Echinops_telfairi.JH980293.1                            62851969  4 - 111700974 -----------t-c-------ct
i Echinops_telfairi.JH980293.1                           I 7 C 0
s Eidolon_helvum.AWHC01266696.1                               4316  2 +     19438 ---------------------ct
i Eidolon_helvum.AWHC01266696.1                          I 5 C 0
s Elephantulus_edwardii.JH947257.1                         9105483  4 -  10337057 -----------t-t-------ct
i Elephantulus_edwardii.JH947257.1                       I 7 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28739  1 +    110024 ---------------------t-
i Ellobius_lutescens.LOEQ01008920.1                      I 187 C 0
s Ellobius_talpinus.LOJH01026522.1                           10716  1 +     18970 ---------------------t-
i Ellobius_talpinus.LOJH01026522.1                       I 185 C 0
s Enhydra_lutris.KZ291758.1                               24913964  4 +  41312741 -----------t-t-------ct
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                             12576382  4 +  14770903 -----------t-t-------ct
i Eptesicus_fuscus.JH977646.1                            I 4 C 0
s Equus_asinus.JREZ01000139.1                              3039464  4 -   4378816 -----------t-t-------ct
i Equus_asinus.JREZ01000139.1                            I 4 C 0
s Equus_caballus.CM000403.2                               21373398  4 +  39960074 -----------t-t-------ct
i Equus_caballus.CM000403.2                              I 4 C 0
s Equus_przewalskii.KK951119.1                              410184  4 -    498745 -----------t-t-------ct
i Equus_przewalskii.KK951119.1                           I 4 C 0
s Erythrocebus_patas.Contig38                               260542  9 +  21539334 AT------ATAT-T-------CT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12752  8 -     24895 A-TT---C---T-T-------CT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40464  8 -     70999 A-TT---C---T-T-------CT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84423  8 +    112731 C-TT---C---T-T-------CT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             40996  8 +     68309 A-TT---C---T-T-------CT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51321  8 -     65740 A-TT---C---T-T-------CT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21951  8 -     75513 A-TT---C---T-T-------CT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46144  8 -     97555 C-TT---C---T-T-------CT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2871  8 +     30972 A-TT---C---T-T-------CT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40594  8 -     52037 A-TT---C---T-T-------CT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              56995  8 -    111500 A-TT---C---T-T-------CT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244773  4 - 206538554 -----------t-t-------ct
i Felis_catus.CM001381.2                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                          185114559  4 - 205367284 -----------t-t-------ct
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25663  4 -     30238 -----------t-t-------ct
i Felis_nigripes.FelNig_flattened_line_31944             I 3 C 0
s Galago_moholi.ctg3793                                     122633  8 -    137831 a----ttc---t-t-------ct
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6173  8 +     22493 a----ttc---t-t-------ct
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18226  8 -     32986 a----ttc---t-t-------ct
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17085  8 +     18121 A-TT---C---T-T-------CT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31969 10 -     36801 T-TTTTTT---T-T-------C-
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3456  9 -      8343 AT------ATAT-T-------CT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252467  9 - 186649187 at------atat-t-------ct
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11288 10 +     11903 T-TTTTTT---T-T-------C-
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12680  8 -     40692 a----ttc---t-t-------ct
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34081  8 +     49394 a----ttc---t-t-------ct
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58950  8 -     66874 a----ttc---t-t-------ct
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7823  8 -     42923 a----ttc---t-t-------ct
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14823  8 -     53142 a----ttc---t-t-------ct
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28655  4 -    327341 -----------T-T-------CA
i Helogale_parvula.HelPar_flattened_line_2585            I 3 C 0
s Heterocephalus_glaber.JH602082.1                         1925088  3 -  22651954 -----------t-t-------c-
i Heterocephalus_glaber.JH602082.1                       I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548233  4 -   1711038 -----------t-t-------tt
i Hipposideros_armiger.JXIK01000431.1                    I 7 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47549  4 +     49977 -----------t-t-------tt
i Hipposideros_galeritus.HipGal_scaffold_23202           I 7 C 0
s Hoolock_leuconedys.ctg274                                    140460  9 -    630532 AT------ATAT-T-------CT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67137  4 +     83186 -----------T-T-------CA
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 3 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69412  3 +    143317 -----------T-T-------C-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 7 C 0
s Hylobates_agilis.k141_1155965                               3495  9 +     12352 AT------ATAT-T-------CT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10678  9 +     55766 AT------ATAT-T-------CT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050274  9 + 191637585 AT------ATAT-T-------CT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799152  9 +  11177569 AT------ATAT-T-------CT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384807  7 +   7955117 t----tct---t-t-------c-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     336  8 +     11955 A-TT---C---T-T-------CT
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237218  8 +   9596543 t---acct---t-t-------a-
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41278  9 +    110728 AT------ATAT-T-------CT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59857  4 -     65777 -----------t-t-------tt
i Lasiurus_borealis.LasBor_scaffold_16567                I 4 C 0
s Lemur_catta.scaffold_24                                 14757471  8 +  30322482 A-TT---C---T-T-------CT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1947  9 -     13097 AT------ATAT-C-------CT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1898  9 +      5940 AT------ATAT-C-------CT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1529  9 -      5717 AT------ATAT-C-------CT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8144  9 -     11567 AT------ATAT-T-------TT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9525  9 -     12945 AT------ATAT-T-------TT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7006  8 +     29618 A-TT---C---T-T-------CT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7003  8 +     31569 A-TT---C---T-T-------CT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7013  8 +     24756 a----ttc---t-t-------ct
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7007  8 +     16388 A-TT---C---T-T-------CT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811313  4 -   3914936 -----------t-t-------ct
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lepus_americanus.LepAme_scaffold_56121                     15923  7 +     24238 T-TCT-AC---T-----------
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330646  9 -   1826925 AT------AGAT-T-------CT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8387  8 +     19643 G-TT---A---T-T-------CT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042048  8 -   6120653 G-TT---A---T-T-------CT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078297  4 +  43346337 -----------t-t-------ct
i Loxodonta_africana.GL010049.1                          I 5 C 0
s Lycaon_pictus.CM007581.1                                41612699  4 +  59628241 -----------t-t-------tt
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_1757516                              42963  9 -     61512 AT------ATAT-T-------CT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370624  9 -  60120075 AT------ATAT-T-------CT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22879  9 +     30207 AT------ATAT-T-------CT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19982  9 -     24934 AT------ATAT-T-------CT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22831  9 +     30527 AT------ATAT-T-------CT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34021  9 -     50087 AT------ATAT-T-------CT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43792  9 +     51645 AT------ATAT-T-------CT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412960  9 - 187317192 at------atat-t-------ct
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397183  9 +  25927173 at------atat-t-------ct
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46347  9 -     62418 AT------ATAT-T-------CT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23002  9 +     24253 AT------ATAT-T-------CT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42823  9 +     59329 AT------ATAT-T-------CT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268756  9 +    668171 AT------ATAT-T-------CT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19937  9 +     21031 AT------ATAT-T-------CT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  534  9 +     17132 AT------ATAT-T-------CT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221281  2 -    270270 ---------------------ct
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 5 C 0
s Mandrillus_leucophaeus.scaffold280                        320034  9 +  24302211 AT------ATAT-T-------CT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354866  9 -    752769 AT------ATAT-T-------CT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671564  4 -    737560 -----------t-t-------ct
i Manis_javanica.JSZB01003497.1                          I 4 C 0
s Manis_pentadactyla.KN006162.1                             218857  4 +    317179 -----------t-t-------ct
i Manis_pentadactyla.KN006162.1                          I 4 C 0
s Marmota_marmota.CZRN01000018.1                           7499016  7 +  40650429 t----tct---t-t-------c-
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148479  4 +    207569 -----------t-t-------ct
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23833  4 -     74585 -----------t-t-------ct
i Mellivora_capensis.MelCap_flattened_line_19308         I 3 C 0
s Mesocricetus_auratus.KB708134.1                         17427360  5 +  29670104 t----ttt---g-----------
i Mesocricetus_auratus.KB708134.1                        I 188 I 1
s Mico_argentatus.k141_582562                                 7907  9 +     17804 AT------ATAT-T-------CT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8691  9 -     12984 AT------ATAT-T-------CT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16642  9 -     26561 AT------ATAT-T-------CT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982618  8 +  93316391 a----ttc---t-t-------ct
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43055  4 +    145209 -----------T-C-------CT
i Microgale_talazaci.MicTal_scaffold_6613                I 7 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182696  4 +    200668 -----------t-t-------tt
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 4 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360797  4 -   8254450 -----------t-t-------ct
i Miniopterus_natalensis.LDJU01000034.1                  I 4 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39698  4 -     48117 -----------T-T-------CT
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 4 C 0
s Miopithecus_ogouensis.k141_1534655                         20061  9 -     27822 AT------ATAT-T-------CT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6323  1 +     27589 ----------------------t
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 3 C 0
s Mirza_zaza.k141_766280                                     50409  8 -     62432 a----ttc---t-t-------ct
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176879  4 +    366855 -----------T-T-------TT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16403  4 -     63510 -----------T-T-------CA
i Mungos_mungo.MunMun_flattened_line_18455               I 3 C 0
s Murina_feae.MurFea_scaffold_17764                          36726  4 +     47283 -----------T-T-------CT
i Murina_feae.MurFea_scaffold_17764                      I 4 C 0
s Mus_caroli.FMAL02030609.1                                   4784  7 +      5579 t----ttt---g-t-------t-
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685488  7 + 129401213 t----ttt---g-t-------t-
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39494805  7 + 130317789 t----ttt---g-t-------t-
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80562 17 -     86153 T-TTTTTT---T-TTGTTTGTT-
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14352777  4 +  14710649 -----------t-t-------ct
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myotis_brandtii.KE162005.1                               9790771  4 +  10118263 -----------t-t-------ct
i Myotis_brandtii.KE162005.1                             I 4 C 0
s Myotis_davidii.KB100139.1                                4385133  4 +   6019432 -----------t-t-------ct
i Myotis_davidii.KB100139.1                              I 4 C 0
s Myotis_lucifugus.GL429869.1                               380953  4 +   4330536 -----------t-t-------ct
i Myotis_lucifugus.GL429869.1                            I 4 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3512  4 +      3929 -----------t-c-------ct
i Myotis_myotis.MyoMyo_scaffold_185951                   I 4 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117608  4 +    130748 -----------T-T-------CT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26642  9 +     34575 AT------ATAC-T-------CT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466710  4 -  31847680 -----------t-t-------ct
i Neomonachus_schauinslandi.NINY01007730.1               I 3 I 211
s Noctilio_leporinus.NocLep_scaffold_7894                   125674  4 -    149072 -----------T-T-------TT
i Noctilio_leporinus.NocLep_scaffold_7894                I 4 C 0
s Nomascus_annamensis.k141_1771965                           51384  9 -    132029 AT------ATAT-T-------CT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7479  9 -     16345 AT------ATAT-T-------CT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13364  9 +     22201 AT------ATAT-T-------CT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411648  9 -  22158432 AT------ATAT-T-------CT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23762  9 -     54323 AT------ATAT-T-------CT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196300  4 +   9404916 -----------t-t-------ct
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 C 0
s Nycticebus_bengalensis.LG01                             93634399  8 + 196305487 A-TT---A---T-T-------CT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1157  8 -      3937 A-TT---A---T-T-------CT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562638  8 - 199412804 A-TT---A---T-T-------CT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549314  5 -   3988456 N----NNN---N-----------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045541  3 -  11899542 -----------t-t-------c-
i Octodon_degus.JH651603.1                               I 15 C 0
s Odobenus_rosmarus.KB229312.1                             1449520  4 +   2017862 -----------t-t-------ct
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90493  1 -    140218 ---------------------T-
i Ondatra_zibethicus.OndZib_scaffold_7387                I 191 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105296  7 +    107918 T-TTT------T-C-------T-
i Onychomys_torridus.OnyTor_scaffold_2487                I 182 I 2
s Orycteropus_afer.OryAfe_flattened_line_171931              11403  4 -     14239 -----------t-t-------ct
i Orycteropus_afer.OryAfe_flattened_line_171931          I 6 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37337  4 +    559221 -----------t-t-------ct
i Otocyon_megalotis.JAEUCK010005147.1                    I 2 C 0
s Otolemur_crassicaudatus.k141_649260                        37781  8 -     51505 a----ttc---t-t-------ct
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350784  8 +   1103335 a----ttc---t-t-------cT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470472  9 - 189151597 at------atat-t-------ct
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22483  4 -    230217 -----------t-t-------ct
i Panthera_onca.PanOnc_flattened_line_3271               I 3 C 0
s Panthera_pardus.KV860321.1                              18459809  4 -  18783137 -----------t-t-------ct
i Panthera_pardus.KV860321.1                             I 3 C 0
s Panthera_tigris.KE722367.1                               3970529  4 +   8748460 -----------t-t-------ct
i Panthera_tigris.KE722367.1                             I 3 C 0
s Papio_anubis.CM001495.2                                   240874  9 - 183742232 at------agat-t-------ct
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7338  9 +     21308 AT------GTAT-T-------CT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288377  9 -  20919399 AT------AGAT-T-------CT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  19993  9 -     27687 AT------GTAT-T-------CT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13129  9 +     16796 AT------AGAT-T-------CT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19939  9 -     23640 AT------AGAT-T-------CT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13136  4 +     78924 -----------T-T-------CA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 C 0
s Perodicticus_ibeanus.k141_1921260                          24068  5 +     31479 A----------T-T-------CT
i Perodicticus_ibeanus.k141_1921260                      T 1332 C 0
s Perodicticus_potto.k141_1854441                            16427  5 -     24908 A----------T-T-------CT
i Perodicticus_potto.k141_1854441                        T 1342 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37587  5 +     38305 A------A---T-T-------C-
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244942  9 +  18517816 t--ttttt---t-t-------t-
i Peromyscus_maniculatus.KI615324.1                      I 182 I 2
s Petromus_typicus.PetTyp_scaffold_17301                     30012  3 -     56120 -----------T-T-------C-
i Petromus_typicus.PetTyp_scaffold_17301                 I 7 C 0
s Piliocolobus_badius.k141_2704958                             157  9 +     55023 AT------ATAC-T-------CT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             158  9 +     40849 AT------ATAC-T-------CT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  251906  9 +  14605196 AT------ATAC-T-------CT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              904  4 +     22231 -----------t-t-------ct
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 4 C 0
s Pithecia_albicans.k141_1239476                             62913  9 +    207309 AT------ATAT-T-------CT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4009  9 -     25401 AT------ATAT-T-------CT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29748  9 +     58159 AT------ATAT-T-------CT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30024  9 +     63561 AT------ATAT-T-------CT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29787  9 +     51148 AT------ATAT-T-------CT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554756  9 -   4542175 AT------ATAT-T-------CT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29771  9 +     51125 AT------ATAT-T-------CT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6180  9 +     39866 AT------CTGT-T-------CT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1265  9 -      9282 AT------CTGT-T-------CT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40669  9 -     87950 AT------CTGT-T-------CT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41062  9 -     88961 AT------CTGT-T-------CT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5761  9 -     39403 AT------CTGT-T-------CT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40713  9 +     87928 AT------CTGT-T-------CT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5758  9 -     60166 AT------CTGT-T-------CT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12694  9 -     67232 AT------CTGT-T-------CT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40610  9 -     90634 AT------CTGT-T-------CT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42078  9 +     89403 AT------CTGT-T-------CT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175612  9 - 189387572 at------atat-t-------ct
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190430  9 -   9816681 AT------ATAT-T-------CT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25256  9 +     69807 AT------ATAC-T-------CT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42451  9 -     80239 at------atac-t-------ct
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980627  8 +   4620579 a----ttc---t-t-------ct
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564095  8 -   2598838 a----ttc---t-t-------ct
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1731  8 -      7103 a----ttc---t-t-------ct
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2328  8 -     11706 a----ttc---t-t-------ct
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6064  8 -     30655 a----ttc---t-t-------ct
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32389  8 +     46564 A-TT---C---T-T-------CT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92660  8 -     98465 a----ttc---t-t-------ct
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6297  8 +     35169 a----ttc---t-t-------ct
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49939  4 -     66298 -----------t-t-------tt
i Pteronotus_parnellii.KE847780.1                        I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2553  4 -     18639 -----------t-t-------ct
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 3 C 0
s Pteropus_alecto.KB030862.1                               5838909  2 -  28871421 ---------------------ct
i Pteropus_alecto.KB030862.1                             I 5 C 0
s Pteropus_vampyrus.KN525825.1                             3535475  2 -   4952924 ---------------------ct
i Pteropus_vampyrus.KN525825.1                           I 5 C 0
s Puma_concolor.QAVW01001104.1                            18097126  4 +  38429054 -----------t-t-------ct
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                             24666  9 +     91421 AT------ATAC-T-------CT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151159  9 -   7812017 AT------ATAC-T-------CT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5536  9 +     72585 AT------ATAC-T-------CT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020700  7 -  90668790 t----tcc---t-t-------t-
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911572  4 +   3329780 -----------T-T-------CT
i Rhinolophus_sinicus.LVEH01000134.1                     I 7 C 0
s Rhinopithecus_bieti.k119_221883                            26476  9 +     27361 at------atac-t-------ct
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119843  9 + 195417433 at------atac-t-------ct
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234084  9 -   7961872 at------atac-t-------ct
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               1858  9 +     27962 AT------ATAT-C-------CT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1866  9 +      6077 AT------ATAT-C-------CT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1885  9 +      5971 AT------ATAT-C-------CT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1939  9 +      5932 AT------ATAT-C-------CT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               123  9 -      4390 AT------ATAT-C-------CT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389206  9 - 209938924 AT------ATAT-C-------CT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1887  9 +      5979 AT------ATAT-C-------CT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2253  9 -      4301 AT------ATAT-C-------CT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236344  9 +   5703754 AT------ATAT-T-------CT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5934  9 +     21866 AT------ATAT-T-------CT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114105  4 +    313613 -----------t-t-------ct
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 4 C 0
s Semnopithecus_entellus.k141_158471                         22983  9 +     27374 AT------ATAC-T-------CT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26502  9 +     58920 AT------ATAC-T-------CT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           12998  9 -     45317 AT------ATAC-T-------CT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20656  9 -     42441 AT------ATAC-T-------CT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23336  9 -     29113 AT------ATAC-T-------CT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26405  9 -     48123 AT------ATAC-T-------CT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46811  7 +     77746 T-TTT------G-C-------T-
i Sigmodon_hispidus.SigHis_scaffold_20193                I 192 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856400  4 -   1910179 -----------t-t-------ct
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 C 0
s Spermophilus_dauricus.KZ294078.1                         1866375  7 +   3870691 t----tct---t-t-------c-
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4550  4 -     97271 -----------t-t-------tt
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122822  4 +    196729 -----------T-T-------CA
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 C 0
s Symphalangus_syndactylus.tarseq_199                       388921  9 +   1523678 AT------ATAT-T-------CT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11714  4 +     22964 -----------t-t-------ct
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 4 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 728  4 +      5583 -----------T-T-------CT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189642  4 +    199430 -----------T-T-------CT
i Tapirus_indicus.TapInd_scaffold_7432                   I 4 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103596  4 -    539355 -----------T-T-------CT
i Tapirus_terrestris.TapTer_scaffold_755                 I 4 C 0
s Tarsius_lariang.k141_1780720                                4966  9 +      6850 AA------TTAT-T-------GT
i Tarsius_lariang.k141_1780720                           C 0 I 1
s Tarsius_wallacei.k141_226975                                5007  9 +     20590 AA------TTAT-T-------GT
i Tarsius_wallacei.k141_226975                           C 0 I 1
s Theropithecus_gelada.CM009954.1                           350860  9 - 186847797 at------atat-t-------ct
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22341  3 -     33621 -----------T-T-------C-
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 6 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17858  4 -     31044 -----------t-t-------ct
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477757  4 -    610378 -----------t-t-------tt
i Tonatia_saurophila.TonSau_scaffold_294                 I 4 C 0
s Trachypithecus_auratus.k141_1189070                        18547  9 +     26378 AT------ATAC-T-------CT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31212  9 -     78344 AT------ATAC-T-------CT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17868  9 +     25722 AT------ATAC-T-------CT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26093  9 -     62838 AT------ATAC-T-------CT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26210  9 +     46913 AT------ATAC-T-------CT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7018  9 -     28527 AT------ATAC-T-------CT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28032  9 -     64340 AT------ATAC-T-------CT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26069  9 -     63452 AT------ATAC-T-------CT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7512  9 +     22490 AT------ATAC-T-------CT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          940  9 -      6147 AT------ATAC-T-------CT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7915  9 -     13050 at------atac-t-------ct
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253154  9 -   6242583 at------atac-t-------ct
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58904  9 +     59866 AT------ATAC-T-------CT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831936  8 -   4065304 c----ttt---t-t-------ct
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6216  8 -     70247 c----ttt---t-t-------ct
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105329  3 -    105689 -----------T-T--------T
i Uropsilus_gracilis.UroGra_scaffold_7153                I 4 C 0
s Ursus_maritimus.KK499267.1                                179902  4 +   5085361 -----------t-t-------ct
i Ursus_maritimus.KK499267.1                             I 3 C 0
s Varecia_rubra.k141_787544                                  23269 10 -     30710 A-TATT-C---T-T-------CT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22176 10 -    147434 A-TATT-C---T-T-------CT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103060  4 -    112863 -----------t-t-------ct
i Vulpes_lagopus.VulLag_flattened_line_12041             I 3 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172147  5 -    224448 t----tcc---t-----------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26718  4 -     86975 -----------t-t-------ct
i Zalophus_californianus.ZalCal_flattened_line_17732     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1391  7 +      2695 T-TCTT-----T-T---------
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 9
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72893  2 -    116970 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            34252  5 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100609 1191 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 46714  5 -    140813 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3128  8 +     36723 T-GCT---GTT--T
s Acinonyx_jubatus.LLWD01001279.1                           810867  8 +   1699592 t-gct---gct--t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413386  8 +  29979442 t-gct---gct--t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16043  5 -     61208 ----T---GTT--T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45523  8 +     53615 t-gct---gtt--t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41463  8 +     44087 T-GCT---GTT--T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14103  8 -     21945 T-GCT---GTT--T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15779  8 +     32033 T-GCT---GTT--T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70232  8 -     84148 T-GCT---GTT--T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42465  8 -     78289 T-GCT---GTT--T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41911  8 +     55831 T-GCT---GTT--T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40353  8 -     64179 T-GCT---GTT--T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           21999  8 -     24835 T-GCT---GTT--T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38982  8 +     45454 T-GCT---GTT--T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44680  8 +     70886 T-GCT---GTT--T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6805  8 +     30854 T-GCT---GTT--T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30944  8 +     42133 T-GCT---GTT--T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174728  8 -    412891 g-tgt---gct--t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48754  8 -     65372 T-GCT---GTT--T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42501  8 +     43593 T-GCT---GTT--T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670514  8 +   5030052 t-gct---gtt--t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22156  8 -     23494 T-GCT---GTT--T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7292  8 +      8415 T-GCT---GTT--T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14075  1 -     32367 -------------T
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 4 C 0
s Arctocebus_calabarensis.k141_1364444                       18618  6 -     45910 C-GAT---GT----
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3014  8 -     15198 g-tgt---gcc--t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272744  8 +  21539123 T-GCT---GCT--T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8911  8 +     48076 T-GCT---GCT--T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4048  8 -     28759 T-GCT---GCT--T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31601  8 +     44353 T-GCT---GCT--T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46972  8 -     71267 T-GCT---GCT--T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21031  8 -     33135 T-GCT---GCT--T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4224  7 +     11645 t-gat----tt--t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4230  7 -     19611 t-gat----tt--t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5935  8 +     28062 T-GCT---GTT--T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41229  8 -     91139 T-GCT---GTT--T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18755  8 +     95584 T-GCT---GTT--T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18668  8 +    119600 T-GCT---GTT--T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8144  8 +     18648 T-GCT---GTT--T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7805  8 -     13885 T-GCT---GTT--T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16505  8 +     17162 T-GCT---GTT--T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451460  8 + 189096842 T-GCT---GTT--T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17753  8 -     18408 T-GCT---GTT--T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503434  8 +  60362399 t-gct---gct--t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7070  8 -     23171 t-gct---gct--t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220413  8 +   9314153 t-gct---gct--T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613548  8 +  59632846 t-gct---gct--t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105129  8 -  63665305 t-gct---gct--t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268284  3 +    496798 ---------tt--t
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3084  8 +      5315 g-tgt---gct--t
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994004  5 +  23392119 ----t---gtt--t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997446  5 +  23407841 ----t---gtt--t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60547  5 -     66877 ----T---GTT--T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3037  8 -     12580 T-GCT---TTT--T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40923  8 +     53515 T-GCT---TTT--T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369133  8 -  26074798 T-GCT---ATT--T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6022  8 -     34880 T-GCT---ATT--T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65117  8 -     89041 T-GCT---ATT--T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1457  3 -      1636 ---------TT--T
i Cephalopachus_bancanus.k141_72622                      I 1 C 0
s Ceratotherium_simum.JH767749.1                          15490192  9 -  27778364 tggct---gct--t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17025  9 +     27315 tggct---gct--t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138702  8 -   4669795 t-gct---gtt--t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42442  8 +     47900 T-GCT---GTT--T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42275  8 -     44860 T-GCT---GTT--T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42258  8 -    148725 T-GCT---GTT--T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25356  8 -     40656 T-GCT---GTT--T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5325  8 +     20796 T-GCT---GTT--T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9515  8 -     17524 T-GCT---GTT--T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25237  8 -     34525 T-GCT---GTT--T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9946  8 -     25376 T-GCT---GTT--T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362541  8 -  39242232 T-GCT---GTT--T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268253  8 +  21565898 T-GCT---GTT--T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29714  8 -     45857 T-GCT---GTT--T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25530  8 -     32606 T-GCT---GTT--T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1687  8 +      8499 T-GCT---GTT--T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23206  8 +     70610 T-GCT---GTT--T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20131  8 +     36323 T-GCT---GTT--T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10840  8 -     19938 T-GCT---GCT--T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28658  7 -     33796 T-GCT----GT--T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3188  7 -     15404 t-gct----gt--t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7019  8 -     32913 T-GCT---GTT--T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17432  8 -     40346 T-GCT---GTT--T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17687  8 +    216457 T-GCT---GTT--T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17480  8 +     39636 T-GCT---GTT--T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1869  1 +      5346 T-------------
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40575  8 -    112038 T-GCT---GTT--T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6147  8 +     34062 T-GCT---GTT--T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341028  8 +  18827391 T-GCT---GTT--T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7573  8 -     44032 T-GCT---GTT--T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302353  8 - 135778131 t-gct---gtt--t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406788  8 -   2368649 t-gct---gtt--t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376664  8 - 200372422 t-gct---gtt--t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                213  8 -     84244 t-gct---gtt--t
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805298  8 +  53390261 t-gcT---GCA--C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           783  8 -      8242 G-GAT---TCT--G
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40347  6 -     83289 ----T-C-ATT--T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112806  2 - 224834208 ----------T--T
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2162  8 +     87169 T-GCT---GCt--t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 184
s Ctenodactylus_gundi.CteGun_scaffold_65                    642858  5 -   1526836 ----T---GTG--T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3036  5 +     50838 ----A---GTC--T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1627  5 +     36344 ----T---GTT--T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108174  8 -   2246927 t-gct---gCT--G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290605  7 +  12879189 t-gct----tt--t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862752  8 -  20541912 g-tgt---gct--t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662485  8 -   1390856 t-gct---gct--t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137269  9 -    198055 tggct---gct--t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96502  5 -    115145 ----T---GTT--T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948389  5 -  37912305 ----t---att--t
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3336  5 -     10735 ----T---GCT--T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7948  5 +     14636 ----T---GTT--T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851973  6 - 111700974 t-gCT---GT----
i Echinops_telfairi.JH980293.1                           C 0 I 1
s Eidolon_helvum.AWHC01266696.1                               4318  8 +     19438 g-act---gct--t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105487  7 -  10337057 t-gct---t-t--c
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28740  2 +    110024 ----------t--t
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10717  2 +     18970 ----------t--t
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913968  8 +  41312741 t-att---gct--t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576386  8 +  14770903 g-gtt---gct--t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039468  8 -   4378816 t-gct---gct--t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373402  8 +  39960074 t-gct---gct--t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410188  8 -    498745 t-gct---gct--t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260551  8 +  21539334 T-GCT---GTT--T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12760  7 -     24895 T-GCT----TT--T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40472  7 -     70999 T-GCT----TT--T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84431  7 +    112731 T-GCT----TT--T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41004  7 +     68309 T-GCT----TT--T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51329  7 -     65740 T-GCT----TT--T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21959  7 -     75513 T-GCT----TT--T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46152  7 -     97555 T-GCT----TT--T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2879  7 +     30972 T-GCT----TT--T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40602  7 -     52037 T-GCT----TT--T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57003  7 -    111500 T-GCT----TT--T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244777  8 - 206538554 t-gat---gct--t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114563  8 - 205367284 t-gat---gct--t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25667  8 -     30238 t-gct---gct--t
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122641  8 -    137831 t-act---gtg--t
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6181  8 +     22493 t-act---gtg--t
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18234  8 -     32986 t-gct---gtg--t
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17093  8 +     18121 T-GCT---GTT--T
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31979  5 -     36801 ----T---GTT--T
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3465  8 -      8343 T-GCT---GTT--T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252476  8 - 186649187 t-gct---gtt--t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11298  5 +     11903 ----T---GTT--T
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12688  7 -     40692 t-gct----tt--t
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34089  7 +     49394 t-gct----tt--t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58958  7 -     66874 t-gct----tt--t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7831  7 -     42923 t-gct----tt--t
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14831  7 -     53142 t-gct----tt--t
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28659  8 -    327341 T-GCT---GCT--T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 160
s Heterocephalus_glaber.JH602082.1                         1925091  5 -  22651954 ----t---gtt--t
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548237  8 -   1711038 g-tgt---gct--t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47553  8 +     49977 g-tgt---gct--t
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140469  8 -    630532 T-GCT---GTT--T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67142  1 +     83186 -------------T
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1 I 129
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69415  5 +    143317 ----T---GTT--T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3504  8 +     12352 T-GCT---GTT--T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10687  8 +     55766 T-GCT---GTT--T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050283  8 + 191637585 T-GCT---GTT--T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799161  8 +  11177569 T-GCT---GTT--T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384814  5 +   7955117 ----t---gtt--t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     344  7 +     11955 T-GAT----TT--T
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237226  5 +   9596543 ----t---gTT--T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41287  8 +    110728 T-GCT---GTT--T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59861  8 -     65777 g-gct---gct--t
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757479  7 +  30322482 T-GCT----TT--T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1956  8 -     13097 T-GCT---GTT--T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1907  8 +      5940 T-GCT---GTT--T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1538  8 -      5717 T-GCT---GTT--T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8153  8 -     11567 T-GCT---GTT--T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9534  8 -     12945 T-GCT---GTT--T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7014  7 +     29618 T-GCT----TT--T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7011  7 +     31569 T-GCT----TT--T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7021  7 +     24756 t-gct----tt--t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7015  7 +     16388 T-GCT----TT--T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811317  8 -   3914936 t-gct---gct--t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     15930  8 +     24238 ----TGCTCTT--T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330655  8 -   1826925 T-GCT---GTT--T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8395  8 +     19643 T-GCT---GTG--G
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042056  8 -   6120653 T-GCT---GTG--G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078301  6 +  43346337 t-gct---gt----
i Loxodonta_africana.GL010049.1                          C 0 I 16
s Lycaon_pictus.CM007581.1                                41612703  8 +  59628241 t-gct---gct--t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42972  8 -     61512 T-GCT---GTT--T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370633  8 -  60120075 T-GCT---GTT--T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22888  8 +     30207 T-GCT---GTT--T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19991  8 -     24934 T-GCT---GTT--T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22840  8 +     30527 T-GCT---GTT--T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34030  8 -     50087 T-GCT---GTT--T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43801  8 +     51645 T-GCT---GTT--T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412969  8 - 187317192 t-gct---gtt--t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397192  8 +  25927173 t-gct---gtt--t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46356  8 -     62418 T-GCT---GTT--T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23011  8 +     24253 T-GCT---GTT--T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42832  8 +     59329 T-GCT---GTT--T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268765  8 +    668171 T-GCT---GTT--T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19946  8 +     21031 T-GCT---GTT--T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  543  8 +     17132 T-GCT---GTT--T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221283  8 -    270270 g-gct---gct--t
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320043  8 +  24302211 T-GAT---GTT--T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354875  8 -    752769 T-GAT---GTT--T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671568  8 -    737560 t-gct---gct--t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218861  8 +    317179 t-gct---act--t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499023  5 +  40650429 ----t---gtt--t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148483  8 +    207569 g-gat---gct--t
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23837  8 -     74585 t-att---gct--t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46719  4 -    140813 --------ATT--T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 5 C 0
s Mesocricetus_auratus.KB708134.1                         17427366  2 +  29670104 ----------t--t
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mico_argentatus.k141_582562                                 7916  8 +     17804 T-GCT---GTT--T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8700  8 -     12984 T-GCT---GTT--T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16651  8 -     26561 T-GCT---GTT--T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982626  7 +  93316391 t-gct----tt--t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43059  6 +    145209 T-TCT---GT----
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_2233                182700  8 +    200668 g-tat---gct--t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360801  8 -   8254450 g-tct---gct--t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39702  8 -     48117 G-TCT---GCT--T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20070  8 -     27822 T-GCT---GTT--T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6324  8 +     27589 t-gct---gct--t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50417  7 -     62432 t-gct----tt--t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176883  8 +    366855 G-TGT---ACA--T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16407  8 -     63510 T-GCT---GGT--T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 174
s Murina_feae.MurFea_scaffold_17764                          36730  8 +     47283 G-GCT---GCT--T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   4791  6 +      5579 ----t--tgct--t
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685495  4 + 129401213 ----t--tgt----
i Mus_musculus.chr8                                      C 0 I 1
s Mus_spretus.CM004101.1                                  39494812  6 + 130317789 ----t--tgtt--t
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80579  5 -     86153 ----T---GTT--T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14352781  8 +  14710649 t-att---gct--t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790775  8 +  10118263 g-gct---gct--t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385137  8 +   6019432 g-gct---gct--t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380957  8 +   4330536 g-gct---gct--t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3516  8 +      3929 g-gct---gct--t
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117612  8 +    130748 T-GCT---GCT--T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26651  8 +     34575 T-GCT---GTT--T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466925  8 -  31847680 t-gct---gtt--t
i Neomonachus_schauinslandi.NINY01007730.1               I 211 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125678  8 -    149072 G-TGT---GCT--T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51393  8 -    132029 T-GCT---GTT--T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7488  8 -     16345 T-GCT---GTT--T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13373  8 +     22201 T-GCT---GTT--T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411657  8 -  22158432 T-GCT---GTT--T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23771  8 -     54323 T-GCT---GTT--T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196304  8 +   9404916 t-gct---gct--t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634407  8 + 196305487 T-GCT---GTA--T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1165  8 -      3937 T-GCT---GTA--T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562646  8 - 199412804 T-GCT---GTA--T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549319  5 -   3988456 ----N---NNN--N
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045544  5 -  11899542 ----a---ctt--t
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449524  8 +   2017862 t-gct---gct--t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90494  2 -    140218 ----------T--T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105305  3 +    107918 ---------TT--T
i Onychomys_torridus.OnyTor_scaffold_2487                I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11407  8 -     14239 t-gct---gct--t
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37341  8 +    559221 t-gct---gct--t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37789  8 -     51505 t-gct---gtg--t
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350792  8 +   1103335 T-GCT---GTG--T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470481  8 - 189151597 t-gct---gtt--t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22487  8 -    230217 t-gct---gct--t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459813  8 -  18783137 t-gct---gct--t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970533  8 +   8748460 t-gct---gct--t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240883  8 - 183742232 t-gct---gtt--t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7347  8 +     21308 T-GCT---GTT--T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288386  8 -  20919399 T-GCT---GTT--T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20002  8 -     27687 T-GCT---GTT--T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13138  8 +     16796 T-GCT---GTT--T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19948  8 -     23640 T-GCT---GTT--T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13140  8 +     78924 T-GCT---ACT--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24073  8 +     31479 T-GCA---GTG--T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16432  8 -     24908 T-GCA---GTG--T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37592  5 +     38305 ----T---ACT--T
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         244953  3 +  18517816 ---------tt--t
i Peromyscus_maniculatus.KI615324.1                      I 2 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30015  5 -     56120 ----T---GTT--T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             166  8 +     55023 T-GCT---GTT--T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             167  8 +     40849 T-GCT---GTT--T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  251915  8 +  14605196 T-gct---gtt--t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              908  8 +     22231 g-gct---gct--t
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62922  8 +    207309 T-GCT---GTT--T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4018  8 -     25401 T-GCT---GTT--T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29757  8 +     58159 T-GCT---GTT--T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30033  8 +     63561 T-GCT---GTT--T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29796  8 +     51148 T-GCT---GTT--T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554765  8 -   4542175 T-GCT---GTT--T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29780  8 +     51125 T-GCT---GTT--T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6189  8 +     39866 T-GCT---GTT--T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1274  8 -      9282 T-GCT---GTT--T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40678  8 -     87950 T-GCT---GTT--T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41071  8 -     88961 T-GCT---GTT--T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5770  8 -     39403 T-GCT---GTT--T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40722  8 +     87928 T-GCT---GTT--T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5767  8 -     60166 T-GCT---GTT--T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12703  8 -     67232 T-GCT---GTT--T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40619  8 -     90634 T-GCT---GTT--T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42087  8 +     89403 T-GCT---GTT--T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175621  8 - 189387572 t-gct---gtt--t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190439  8 -   9816681 T-GCT---GTT--T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25265  8 +     69807 T-GCT---GTT--T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42460  8 -     80239 t-gct---gtt--t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980635  7 +   4620579 t-gct----tt--t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564103  7 -   2598838 t-gat----tt--t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1739  7 -      7103 t-gat----tt--t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2336  7 -     11706 t-gat----tt--t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6072  7 -     30655 t-gat----tt--t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32397  7 +     46564 T-GAT----TT--T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92668  7 -     98465 t-gat----tt--t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6305  7 +     35169 t-gat----tt--t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34257  4 +     52041 --------att--t
i Psammomys_obesus.NESX01036366.1                        I 5 C 0
s Pteronotus_parnellii.KE847780.1                            49943  8 -     66298 c-tgt---gtt--t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2557  8 -     18639 t-att---gct--t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838911  8 -  28871421 g-gct---gct--t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535477  8 -   4952924 g-gct---gct--t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097130  8 +  38429054 t-gct---gct--t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24675  8 +     91421 T-GCT---GTT--T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151168  8 -   7812017 T-GCT---GTT--T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5545  8 +     72585 T-GCT---GTT--T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020707  6 -  90668790 ----t--tgtt--t
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911576  8 +   3329780 G-TAT---gct--t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26485  8 +     27361 t-gct---gtt--t
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119852  8 + 195417433 t-gct---gtt--t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234093  8 -   7961872 t-gct---gtt--t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72895  6 -    116970 ---ct---act--t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 2 C 0
s Saguinus_imperator.k141_1898058                             1894  8 +      5971 T-GCT---GTT--T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1948  8 +      5932 T-GCT---GTT--T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               132  8 -      4390 T-GCT---GTT--T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_mystax.k141_8077960                                1896  8 +      5979 T-GCT---GTT--T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Sapajus_apella.ctg103                                     236353  8 +   5703754 T-GCT---GTT--T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5943  8 +     21866 T-GCT---GTT--T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114109  8 +    313613 t-gct---gca--t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         22992  8 +     27374 T-GCT---GTT--T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26511  8 +     58920 T-GCT---GTT--T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13007  8 -     45317 T-GCT---GTT--T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20665  8 -     42441 T-GCT---GTT--T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23345  8 -     29113 T-GCT---GTT--T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26414  8 -     48123 T-GCT---GTT--T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46818  2 +     77746 ----------T--T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856404  8 -   1910179 t-gct---cct--t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866382  5 +   3870691 ----t---ctt--t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4554 10 -     97271 g-act---gctatt
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122826  8 +    196729 T-GCT---GCT--T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 154
s Symphalangus_syndactylus.tarseq_199                       388930  8 +   1523678 T-GCT---GTT--T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11718  8 +     22964 g-gct---gat--t
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 732  8 +      5583 T-GCT---GCT--T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189646  8 +    199430 T-GCT---GCT--T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103600  8 -    539355 T-GCT---GCT--T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4976  3 +      6850 ---------TT--T
i Tarsius_lariang.k141_1780720                           I 1 C 0
s Tarsius_wallacei.k141_226975                                5017  3 +     20590 ---------TT--T
i Tarsius_wallacei.k141_226975                           I 1 C 0
s Theropithecus_gelada.CM009954.1                           350869  8 - 186847797 t-gct---gtt--t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22344  5 -     33621 ----T---GTT--T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17862  8 -     31044 t-gct---gct--t
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477761  8 -    610378 g-tgt---gct--t
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18556  8 +     26378 T-GCT---GTT--T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31221  8 -     78344 T-GCT---GTT--T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17877  8 +     25722 T-GCT---GTT--T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26102  8 -     62838 T-GCT---GTT--T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26219  8 +     46913 T-GCT---GTT--T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7027  8 -     28527 T-GCT---GTT--T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28041  8 -     64340 T-GCT---GTT--T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26078  8 -     63452 T-GCT---GTT--T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7521  8 +     22490 T-GCT---GTT--T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          949  8 -      6147 T-GCT---GTT--T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7924  8 -     13050 t-gct---gtt--t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253163  8 -   6242583 t-gct---gtt--t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58913  8 +     59866 T-GCT---GTT--T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831944  8 -   4065304 t-atg---gtt--t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6224  8 -     70247 t-atg---gtt--t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105332  8 -    105689 C-GCT---GCA--T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179906  8 +   5085361 t-gct---gct--t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23279  7 -     30710 T-GCT----TT--T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22186  7 -    147434 T-GCT----TT--T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103064  8 -    112863 t-gct---gct--t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172152  5 -    224448 ----t---gtt--t
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26722  8 -     86975 t-gct---gct--t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_211135                      1409  4 +      3117 --------GTT--T
i Zapus_hudsonius.ZapHud_scaffold_211135                 I 88 C 0
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Saguinus_oedipus.k141_1466288                               2262  0 -      4301 C
e Saguinus_midas.LG03                                       389215  0 - 209938924 C
e Saguinus_geoffroyi.k141_3779887                             1875  0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1867  0 +     27962 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100609 1191 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     17962  9 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3136 5 +     36723 TT--AGT
s Acinonyx_jubatus.LLWD01001279.1                           810875 5 +   1699592 ttaa--t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     17971 5 +     63021 TC--AGT
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 9 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413394 5 +  29979442 ttag--t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16048 5 -     61208 CC--AGT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45531 5 +     53615 tt--aat
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41471 5 +     44087 TT--AAT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14111 5 -     21945 TT--AAT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15787 5 +     32033 TT--AAT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70240 5 -     84148 TT--AGT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42473 5 -     78289 TT--AGT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41919 5 +     55831 TT--AGT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40361 5 -     64179 TT--AGT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22007 5 -     24835 TT--AGG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38990 5 +     45454 TT--AGG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44688 5 +     70886 TT--AGT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6813 5 +     30854 TT--AGT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30952 5 +     42133 TT--AGT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174736 5 -    412891 tttg--t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48762 5 -     65372 TT--AGT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42509 5 +     43593 TT--AGT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670522 5 +   5030052 tt--agt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22164 5 -     23494 TT--AGT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7300 5 +      8415 TT--AGT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14076 5 -     32367 TT--AGT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3022 5 -     15198 tttg--t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272752 5 +  21539123 TT--AGT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8919 5 +     48076 TT--AGT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4056 5 -     28759 TT--AGT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31609 5 +     44353 TT--AGT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46980 5 -     71267 TT--AGT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21039 5 -     33135 TT--AGT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4231 5 +     11645 tt--aga
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4237 5 -     19611 tt--aga
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   5943 5 +     28062 TC--AGT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41237 5 -     91139 TC--AGT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18763 5 +     95584 TC--AGT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18676 5 +    119600 TC--AGT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8152 5 +     18648 TT--ATT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7813 5 -     13885 TT--ATT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16513 5 +     17162 TT--ATT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451468 5 + 189096842 TT--ATA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17761 5 -     18408 TT--ATT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503442 5 +  60362399 ttag--t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7078 5 -     23171 ttag--t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220421 5 +   9314153 TTAG--T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613556 5 +  59632846 ttag--t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105137 5 -  63665305 ttag--t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268287 5 +    496798 ta--aat
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3092 5 +      5315 tttg--c
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994009 5 +  23392119 tt--agt
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997451 5 +  23407841 tt--agt
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60552 5 -     66877 TT--AGT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3045 5 -     12580 TT--ATT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40931 5 +     53515 TT--ATT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369141 5 -  26074798 TT--CAT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6030 5 -     34880 TT--CAT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65125 5 -     89041 TT--CAT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1460 5 -      1636 TA--AAT
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490201 5 -  27778364 ctag--g
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17034 5 +     27315 ctag--g
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138710 5 -   4669795 tt--aat
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42450 5 +     47900 TT--AAT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42283 5 -     44860 TT--AAT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42266 5 -    148725 TT--AAT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25364 5 -     40656 TT--AAT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5333 5 +     20796 TT--AAT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9523 5 -     17524 TT--AAT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25245 5 -     34525 TT--AAT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9954 5 -     25376 TT--AAT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362549 5 -  39242232 TT--AAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268261 5 +  21565898 TT--AAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29722 5 -     45857 TT--AAT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25538 5 -     32606 TT--AAT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1695 5 +      8499 TT--AAT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23214 5 +     70610 TT--AAT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20139 5 +     36323 TT--AAT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10848 3 -     19938 GT----A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 10
s Cheirogaleus_major.k141_666340                             28665 5 -     33796 TT--GGT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3195 5 -     15404 ct--agt
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7027 5 -     32913 TC--AGT
i Cheracebus_lucifer.k141_2312002                        C 0 I 8
s Cheracebus_lugens.k141_1179667                             17440 5 -     40346 TC--AGT
i Cheracebus_lugens.k141_1179667                         C 0 I 8
s Cheracebus_regulus.k141_471822                             17695 5 +    216457 TC--AGT
i Cheracebus_regulus.k141_471822                         C 0 I 8
s Cheracebus_torquatus.k141_890198                           17488 5 +     39636 TC--AGT
i Cheracebus_torquatus.k141_890198                       C 0 I 8
s Chiropotes_israelita.k141_313004                           40583 5 -    112038 TC--AGT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6155 5 +     34062 TC--AGT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341036 5 +  18827391 TT--AAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7581 5 -     44032 TT--AAT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302361 5 - 135778131 tt--aat
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406796 5 -   2368649 tt--aat
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376672 5 - 200372422 tt--aat
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                221 5 -     84244 tt--aat
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805306 5 +  53390261 TTCA--T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           791 5 -      8242 TCTG--T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40353 5 -     83289 TT--AGA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112808 5 - 224834208 TT--AGA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2354 5 +     87169 TTAA--T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 184 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642863 5 -   1526836 TT--AGT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3041 5 +     50838 TT--AGT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1632 5 +     36344 TT--AGT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108182 3 -   2246927 GT----G
i Dasypus_novemcinctus.JH564415.1                        C 0 I 10
s Daubentonia_madagascariensis.ctg71                        290612 5 +  12879189 tt--agt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862760 5 -  20541912 cttg--t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662493 5 -   1390856 ctag--t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137278 5 -    198055 ctag--g
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96507 5 -    115145 TT--AGT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948394 5 -  37912305 gc--aGT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3341 5 -     10735 GT--AGT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  7953 5 +     14636 TT--AGT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4326 5 +     19438 ttaa--t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105494 5 -  10337057 tAAC--T
i Elephantulus_edwardii.JH947257.1                       C 0 I 10
s Ellobius_lutescens.LOEQ01008920.1                          28742 5 +    110024 tt--aga
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           10719 5 +     18970 tt--aga
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24913976 5 +  41312741 ttag--t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576394 5 +  14770903 ttag--t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039476 5 -   4378816 ctag--t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373410 5 +  39960074 ctag--t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410196 5 -    498745 ctag--t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260559 5 +  21539334 TT--AAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12767 5 -     24895 TT--AGT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40479 5 -     70999 TT--AGT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84438 5 +    112731 TT--AGT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41011 5 +     68309 TT--AGT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51336 5 -     65740 TT--AGT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21966 5 -     75513 TT--AGT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46159 5 -     97555 TT--AGT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2886 5 +     30972 TT--AGT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40609 5 -     52037 TT--AGT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57010 5 -    111500 TT--AGT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244785 5 - 206538554 ttaa--t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114571 5 - 205367284 ttaa--t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25675 5 -     30238 ttaa--t
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122649 5 -    137831 tt--agt
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6189 5 +     22493 tt--agt
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18242 5 -     32986 tt--agt
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17101 5 +     18121 TT--ACT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            31984 5 -     36801 TC--AGT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3473 5 -      8343 TT--AGT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252484 5 - 186649187 tt--agt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11303 5 +     11903 TC--AGT
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12695 5 -     40692 tt--agt
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34096 5 +     49394 tt--agt
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58965 5 -     66874 tt--agt
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7838 5 -     42923 tt--agt
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14838 5 -     53142 tt--agt
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28827 5 -    327341 TTAA--T
i Helogale_parvula.HelPar_flattened_line_2585            I 160 C 0
s Heterocephalus_glaber.JH602082.1                         1925096 5 -  22651954 tt--agt
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548245 5 -   1711038 ttta--t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47561 5 +     49977 ttta--t
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140477 5 -    630532 TT--TGT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67272 5 +     83186 TTAA--T
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 129 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69420 5 +    143317 TT--AGT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3512 5 +     12352 TT--AGT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10695 5 +     55766 TT--AGT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050291 5 + 191637585 TT--AGT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799169 5 +  11177569 TT--AGT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384819 5 +   7955117 tt--agt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     351 5 +     11955 TT--AGA
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237231 5 +   9596543 TT--CGT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41295 5 +    110728 TT--AGT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59869 5 -     65777 ttag--t
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757486 5 +  30322482 TT--AGT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1964 5 -     13097 TT--AGT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1915 5 +      5940 TT--AGT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1546 5 -      5717 TT--AGT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8161 5 -     11567 TT--ATT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9542 5 -     12945 TT--ATT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7021 5 +     29618 TT--AGT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7018 5 +     31569 TT--AGT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7028 5 +     24756 tt--agt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7022 5 +     16388 TT--AGT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811325 5 -   3914936 ttag--t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     15938 5 +     24238 TT--AAT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330663 5 -   1826925 TT--AAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8403 5 +     19643 TT--AGT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042064 5 -   6120653 TT--AGT
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41612711 5 +  59628241 ttag--t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              42980 5 -     61512 TT--AAT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370641 5 -  60120075 TT--AAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22896 5 +     30207 TT--AAT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           19999 5 -     24934 TT--AAT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22848 5 +     30527 TT--AAT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34038 5 -     50087 TT--AAT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43809 5 +     51645 TT--AAT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412977 5 - 187317192 tt--aat
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397200 5 +  25927173 tt--aat
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46364 5 -     62418 TT--AAT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23019 5 +     24253 TT--AAT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42840 5 +     59329 TT--AAT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268773 5 +    668171 TT--AAT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19954 5 +     21031 TT--AAT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  551 5 +     17132 TT--AAT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221291 5 -    270270 ttaa--t
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320051 5 +  24302211 TT--AAT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354883 5 -    752769 TT--AAT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671576 5 -    737560 ttag--t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218869 5 +    317179 ttag--t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499028 6 +  40650429 tta-agt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148491 5 +    207569 ttct--t
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23845 5 -     74585 ttag--t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46723 5 -    140813 TT--TAA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427368 5 +  29670104 tt--aga
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 7924 5 +     17804 TT--ATT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8708 5 -     12984 TT--ACT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16659 5 -     26561 TT--ATT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982633 5 +  93316391 tt--agt
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182708 5 +    200668 tttg--t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360809 5 -   8254450 ttag--t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39710 5 -     48117 TTAG--T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20078 5 -     27822 TT--AAT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6332 5 +     27589 ttag--t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50424 5 -     62432 tt--agt
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176891 5 +    366855 TTAG--T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16589 5 -     63510 TTAA--T
i Mungos_mungo.MunMun_flattened_line_18455               I 174 C 0
s Murina_feae.MurFea_scaffold_17764                          36738 5 +     47283 TTAG--T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   4797 5 +      5579 tt--aga
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685500 5 + 129401213 tt--aga
i Mus_musculus.chr8                                      I 1 C 0
s Mus_spretus.CM004101.1                                  39494818 5 + 130317789 tt--aga
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80584 5 -     86153 TT--AGT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14352789 5 +  14710649 ttag--t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790783 5 +  10118263 ttag--t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385145 5 +   6019432 ttag--t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               380965 5 +   4330536 ttag--t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3524 5 +      3929 ttag--t
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117620 3 +    130748 GC----A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26659 5 +     34575 TT--AAT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466933 5 -  31847680 ttaa--t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125686 5 -    149072 TTAG--T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51401 5 -    132029 TT--AGT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7496 5 -     16345 TT--AGT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13381 5 +     22201 TT--AGT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411665 5 -  22158432 TT--AGT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23779 5 -     54323 TT--AGT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196312 5 +   9404916 ttac--t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634415 5 + 196305487 TT--AGT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1173 5 -      3937 TT--AGT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562654 5 - 199412804 TT--AGT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549324 5 -   3988456 NN--NNN
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045549 5 -  11899542 tt--agt
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449532 5 +   2017862 ttag--t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90496 5 -    140218 TT--AGA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105308 5 +    107918 TC--AGA
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11415 5 -     14239 ttag--t
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 10
s Otocyon_megalotis.JAEUCK010005147.1                        37349 5 +    559221 ttac--t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37797 5 -     51505 tt--agt
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350800 5 +   1103335 TT--AGT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470489 5 - 189151597 tt--agt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22495 5 -    230217 ttaa--t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459821 5 -  18783137 ttaa--t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970541 5 +   8748460 ttaa--t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240891 5 - 183742232 tt--aat
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7355 5 +     21308 TT--AAT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288394 5 -  20919399 TT--AAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20010 5 -     27687 TT--AAT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13146 5 +     16796 TT--AAT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19956 5 -     23640 TT--AAT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13148 5 +     78924 TTAA--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24081 5 +     31479 TT--AGT
i Perodicticus_ibeanus.k141_1921260                      C 0 I 1325
s Perodicticus_potto.k141_1854441                            16440 5 -     24908 TT--AGT
i Perodicticus_potto.k141_1854441                        C 0 I 1335
s Peromyscus_maniculatus.KI615324.1                         244956 5 +  18517816 ta--aga
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30020 5 -     56120 TT--AGT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             174 5 +     55023 TT--AAT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             175 5 +     40849 TT--AAT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  251923 5 +  14605196 tt--aat
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              916 5 +     22231 ttag--t
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             62930 5 +    207309 TC--AGT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4026 5 -     25401 TC--AGT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29765 5 +     58159 TC--AGT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30041 5 +     63561 TC--AGT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29804 5 +     51148 TC--AGT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554773 5 -   4542175 TC--AGT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29788 5 +     51125 TC--AGT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6197 5 +     39866 TC--AGC
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 8
s Plecturocebus_brunneus.k141_862875                          1282 5 -      9282 TC--AGC
i Plecturocebus_brunneus.k141_862875                     C 0 I 8
s Plecturocebus_caligatus.k141_1382851                       40686 5 -     87950 TC--AGC
i Plecturocebus_caligatus.k141_1382851                   C 0 I 8
s Plecturocebus_cinerascens.k141_1164729                     41079 5 -     88961 TC--AGC
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 8
s Plecturocebus_cupreus.k141_2351393                          5778 5 -     39403 TC--AGC
i Plecturocebus_cupreus.k141_2351393                     C 0 I 8
s Plecturocebus_dubius.k141_1058799                          40730 5 +     87928 TC--AGC
i Plecturocebus_dubius.k141_1058799                      C 0 I 8
s Plecturocebus_grovesi.k141_2013005                          5775 5 -     60166 TC--AGC
i Plecturocebus_grovesi.k141_2013005                     C 0 I 8
s Plecturocebus_hoffmannsi.k141_3303950                      12711 5 -     67232 TC--AGC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 8
s Plecturocebus_miltoni.k141_349282                          40627 5 -     90634 TC--AGC
i Plecturocebus_miltoni.k141_349282                      C 0 I 8
s Plecturocebus_moloch.k141_1031110                          42095 5 +     89403 TC--AGC
i Plecturocebus_moloch.k141_1031110                      C 0 I 8
s Pongo_abelii.CM009266.2                                   175629 5 - 189387572 tt--agt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190447 5 -   9816681 TT--AGT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25273 5 +     69807 TT--AAT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42468 5 -     80239 tt--aat
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980642 5 +   4620579 tt--agt
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564110 5 -   2598838 tt--aga
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1746 5 -      7103 tt--gga
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2343 5 -     11706 tt--aga
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6079 5 -     30655 tt--aga
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32404 5 +     46564 TT--AGA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92675 5 -     98465 tt--cga
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6312 5 +     35169 tt--gga
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34261 5 +     52041 tt--aga
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            49951 5 -     66298 ttag--t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2565 5 -     18639 ttat--t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5838919 5 -  28871421 ttaa--t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535485 5 -   4952924 taaa--t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097138 5 +  38429054 ttaa--t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24683 5 +     91421 TT--AAT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151176 5 -   7812017 TT--AAT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5553 5 +     72585 TT--AAT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020713 5 -  90668790 tt--aga
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911584 5 +   3329780 ttta--t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26493 5 +     27361 tt--aat
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119860 5 + 195417433 tt--aat
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234101 5 -   7961872 tt--aat
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72901 5 -    116970 ttaa--t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_imperator.k141_1898058                             1902 5 +      5971 TT--AGT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1956 5 +      5932 TT--AGT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               140 5 -      4390 TT--AGT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_mystax.k141_8077960                                1904 5 +      5979 TT--AGT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Sapajus_apella.ctg103                                     236361 5 +   5703754 TT--CGT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5951 5 +     21866 TT--CGT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114117 5 +    313613 ttct--t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23000 5 +     27374 TT--AAT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26519 5 +     58920 TT--AAT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13015 5 -     45317 TT--AAT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20673 5 -     42441 TT--AAT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23353 5 -     29113 TT--AAT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26422 5 -     48123 TT--AAT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46820 5 +     77746 TT--AGA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856412 3 -   1910179 tt----t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866387 5 +   3870691 tt--agt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4564 5 -     97271 ttag--t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             122988 5 +    196729 TTAA--T
i Suricata_suricatta.SurSur_flattened_line_6629          I 154 C 0
s Symphalangus_syndactylus.tarseq_199                       388938 5 +   1523678 TT--AGT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11726 5 +     22964 tcag--t
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 740 3 +      5583 GC----A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189654 5 +    199430 CTAT--T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103608 5 -    539355 CTAT--T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                4979 5 +      6850 TA--AAT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5020 5 +     20590 TA--AAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350877 5 - 186847797 tt--aat
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22349 5 -     33621 TC--AGT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17870 3 -     31044 GT----A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 10
s Tonatia_saurophila.TonSau_scaffold_294                    477769 5 -    610378 tttg--t
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18564 5 +     26378 TT--AAT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31229 5 -     78344 TT--AAT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17885 5 +     25722 TT--AAT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26110 5 -     62838 TT--AAT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26227 5 +     46913 TT--AAT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7035 5 -     28527 TT--AAT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28049 5 -     64340 TT--AAT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26086 5 -     63452 TT--AAT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7529 5 +     22490 TT--AAT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          957 5 -      6147 TT--AAT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7932 5 -     13050 tt--aat
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253171 5 -   6242583 tt--aat
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58921 5 +     59866 TT--AAT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831952 5 -   4065304 tt--agT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6232 5 -     70247 tt--agt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105340 5 -    105689 TTAG--T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                179914 5 +   5085361 ttag--t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23286 5 -     30710 TT--AGT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22193 5 -    147434 TT--AGT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103072 5 -    112863 ttag--t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172157 5 -    224448 tt--agt
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26730 5 -     86975 ttag--t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_211135                      1413 5 +      3117 TT--AGA
i Zapus_hudsonius.ZapHud_scaffold_211135                 C 0 I 692
e Perognathus_longimembris.PerPac_flattened_line_28053       37597 0 +     38305 C
e Microgale_talazaci.MicTal_scaffold_6613                    43065 1 +    145209 I
e Echinops_telfairi.JH980293.1                            62851979 1 - 111700974 I
e Arctocebus_calabarensis.k141_1364444                       18624 0 -     45910 C
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Saguinus_oedipus.k141_1466288                               2262 0 -      4301 C
e Saguinus_midas.LG03                                       389215 0 - 209938924 C
e Saguinus_geoffroyi.k141_3779887                             1875 0 +      6077 C
e Saguinus_bicolor.k141_1429097                               1867 0 +     27962 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107100609 1191 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215754 5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Loxodonta_africana.GL010049.1                           39078307 16 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Chiropotes_albinasus.k141_1946120                           1870 0 +      5346 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3141 21 +     36723 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----AGT
s Acinonyx_jubatus.LLWD01001279.1                           810880 21 +   1699592 gtta-t-ttc-------------c-----ag---g---------------a------aga---gt-----ggt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 27
s Acomys_cahirinus.AcoCah_scaffold_21377                     17976 21 +     63021 CCTC-C-CAT-------------T-----AG---A---------------A------ATA---AT-----ATT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 40
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413399 21 +  29979442 gtcc-t-ttc-------------c-----ag---g---------------a------ata---gt-----ggt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 27
s Allactaga_bullata.AllBul_scaffold_20030                    16053 23 -     61208 ATAC-T-TTT-------------C-----AG---A---------------G----AGAGA---GT-----ATT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 47
s Allenopithecus_nigroviridis.k141_3755588                   45536 21 +     53615 atta-t-ttt-------------c-----ag---g---------------a------aga---ac-----agt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41476 21 +     44087 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----ATT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14116 21 -     21945 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15792 21 +     32033 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70245 21 -     84148 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GC-----AGT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42478 21 -     78289 ATTG-T-TTT-------------T-----GG---G---------------A------GGA---GC-----AGT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41924 21 +     55831 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GC-----AGT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40366 21 -     64179 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GC-----AGT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22012 21 -     24835 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GC-----AGT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             38995 21 +     45454 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GC-----AGT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44693 21 +     70886 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GC-----AGT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6818 21 +     30854 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GC-----AGT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30957 21 +     42133 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GC-----AGT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174741 21 -    412891 gtta-t-ttc-------------c-----ag---a---------------a------aga---at-----ggt
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 27
s Aotus_azarae.k141_118258                                   48767 21 -     65372 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42514 21 +     43593 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670527 21 +   5030052 atta-t-ttt-------------t-----gg---g---------------A------GGA---GT-----AGT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22169 21 -     23494 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7305 21 +      8415 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14081 21 -     32367 GCCA-T-TTT-------------C-----TG---G---------------A------AGA---GT-----ATT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18624 23 -     45910 AGTA-T-TTTGGAGAGTTATCTAC-----A-------------------------------------------
i Arctocebus_calabarensis.k141_1364444                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3027 21 -     15198 gtta-t-ttt-------------c-----ag---a---------------a------aga---AT-----TGT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 27
s Ateles_geoffroyi_b.tarseq_1536                               272757 21 +  21539123 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8924 21 +     48076 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4061 21 -     28759 ATTA-T-TTT-------------G-----GG---G---------------A------GGA---GT-----AGT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31614 21 +     44353 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              46985 21 -     71267 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21044 21 -     33135 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4236 12 +     11645 atta-t-ttt-------------t-----ag---g--------------------------------------
i Avahi_laniger.k141_2756659                             C 0 I 18
s Avahi_peyrierasi.k141_1823318                               4242 12 -     19611 atta-t-ttt-------------t-----ag---g--------------------------------------
i Avahi_peyrierasi.k141_1823318                          C 0 I 18
s Cacajao_ayresi.k141_96119                                   5948 21 +     28062 ATTA-T-TTT-------------T-----GG---G---------------A------GAA---GT-----AGT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41242 21 -     91139 ATTA-T-TTT-------------T-----GG---G---------------A------GAA---GT-----AGT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18768 21 +     95584 ATTA-T-TTT-------------T-----GG---G---------------A------GAA---GT-----AGT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18681 21 +    119600 ATTA-T-TTT-------------T-----GG---G---------------A------GAA---GT-----AGT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8157 21 +     18648 ATTA-T-TTT-------------G-----GG---G---------------A------GGA---GG-----AGT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7818 21 -     13885 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GG-----AGT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16518 21 +     17162 ATTA-T-TTT-------------G-----GG---G---------------A------GGA---GG-----AGT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451473 21 + 189096842 ATTA-T-TTT-------------G-----GG---G---------------A------GGA---GG-----AGT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17766 21 -     18408 ATTA-T-TTT-------------G-----GG---G---------------A------GGA---GG-----AGT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503447 21 +  60362399 gtca-t-ttc-------------t-----ag---g---------------a------aca---gt-----ggt
i CanFam4.chr16                                          C 0 I 31
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7083 21 -     23171 gtca-t-ttc-------------t-----ag---g---------------a------aca---gt-----ggt
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 31
s Canis_lupus_dingo.QKWQ01000480.1                          220426 21 +   9314153 GTCA-T-TTC-------------T-----AG---G---------------A------ACA---GT-----GGT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 31
s Canis_lupus_familiaris.chr16                            41613561 21 +  59632846 gtca-t-ttc-------------t-----ag---g---------------a------aca---gt-----ggt
i Canis_lupus_familiaris.chr16                           C 0 I 31
s Canis_lupus_orion.HG994398.1                            45105142 21 -  63665305 gtca-t-ttc-------------t-----ag---g---------------a------aca---gt-----ggt
i Canis_lupus_orion.HG994398.1                           C 0 I 31
s Carlito_syrichta.NW_007259797.1                           268292 21 +    496798 atta-t-ttt-------------c-----ag---g---------------a------AGA---GT-----AGT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3097 21 +      5315 gtta-t-ttc-------------c-----ag---a---------------a------aga---at-----ggt
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 40
s Cavia_aperea.AVPZ01000300.1                              4994014 21 +  23392119 gtta-c-ttt-------------c-----ag---c---------------a------aga---at-----att
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997456 21 +  23407841 gtta-c-ttt-------------c-----ag---c---------------a------aga---at-----att
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60557 21 -     66877 GTTA-C-TTT-------------C-----AG---C---------------A------AGA---AT-----ATT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3050 21 -     12580 ATTA-T-TTT-------------G-----GG---G---------------A------GGA---GG-----AGT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40936 21 +     53515 ATTA-T-TTT-------------G-----GG---G---------------A------GGA---GG-----AGT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369146 21 -  26074798 ATTA-T-TTC-------------T-----GG---G---------------A------GGA---GC-----AGT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6035 21 -     34880 ATTA-T-TTC-------------T-----GG---G---------------A------GGA---GC-----AGT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65130 21 -     89041 ATTA-T-TTC-------------T-----GG---G---------------A------GGA---GC-----AGT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1465 21 -      1636 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----AGT
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490206 21 -  27778364 gtta-t-ttc-------------c-----aa---g---------------a------aga---gt-----ggt
i Ceratotherium_simum.JH767749.1                         C 0 I 27
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17039 21 +     27315 gtta-t-ttc-------------c-----aa---g---------------a------aga---gt-----ggt
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 27
s Cercocebus_atys.KQ010504.1                                138715 21 -   4669795 atta-t-ttt-------------c-----ag---g---------------a------AGA---GC-----AGT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42455 21 +     47900 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42288 21 -     44860 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42271 21 -    148725 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25369 21 -     40656 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5338 21 +     20796 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9528 21 -     17524 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25250 21 -     34525 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9959 21 -     25376 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362554 21 -  39242232 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268266 21 +  21565898 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29727 21 -     45857 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----ATT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25543 21 -     32606 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1700 21 +      8499 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23219 21 +     70610 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----ATT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20144 21 +     36323 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10861  7 -     19938 ----------------------------------------------------------GG---GT-----CAT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 10 C 0
s Cheirogaleus_major.k141_666340                             28670 12 -     33796 ATTA-T-TTT-------------T-----AG---G--------------------------------------
i Cheirogaleus_major.k141_666340                         C 0 I 18
s Cheirogaleus_medius.k141_759766                             3200 12 -     15404 atta-t-ttt-------------t-----ag---g--------------------------------------
i Cheirogaleus_medius.k141_759766                        C 0 I 18
s Cheracebus_lucifer.k141_2312002                             7040 12 -     32913 -----------------------------GG---G---------------A------GGA---GT-----AGT
i Cheracebus_lucifer.k141_2312002                        I 8 C 0
s Cheracebus_lugens.k141_1179667                             17453 12 -     40346 -----------------------------GG---G---------------A------GGA---GT-----AGT
i Cheracebus_lugens.k141_1179667                         I 8 C 0
s Cheracebus_regulus.k141_471822                             17708 12 +    216457 -----------------------------GG---G---------------A------GGA---GT-----AGT
i Cheracebus_regulus.k141_471822                         I 8 C 0
s Cheracebus_torquatus.k141_890198                           17501 12 +     39636 -----------------------------GG---G---------------A------GGA---GT-----AGT
i Cheracebus_torquatus.k141_890198                       I 8 C 0
s Chiropotes_albinasus.k141_1946120                           1870 13 +      5346 --------TT-------------T-----GG---G---------------A------GGA---GT-----C--
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40588 21 -    112038 ATTA-T-TTT-------------T-----GG---G---------------A------GAA---GT-----AGT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6160 21 +     34062 ATTA-T-TTT-------------T-----GG---G---------------A------GAA---GT-----AGT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341041 21 +  18827391 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----ATT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7586 21 -     44032 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----ATT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302366 21 - 135778131 atta-t-ttt-------------c-----ag---g---------------a------AGA---GC-----ATT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406801 21 -   2368649 atta-t-ttt-------------c-----ag---g---------------a------AGA---GC-----AGT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376677 21 - 200372422 atta-t-ttt-------------c-----ag---g---------------a------aga---gc-----agt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                226 21 -     84244 atta-t-ttt-------------c-----ag---g---------------a------aga---gc-----agt
i Colobus_polykomos.k141_906115                          C 0 I 7
s Condylura_cristata.JH655891.1                           35805311 21 +  53390261 GTTA-C-TTC-------------C-----AG---A---------------G------AGA---GT-----GGT
i Condylura_cristata.JH655891.1                          C 0 I 27
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           796 21 -      8242 GTTA-C-TTC-------------C-----AG---A---------------A------AGA---AT-----GGT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 27
s Cricetomys_gambianus.CriGam_scaffold_14425                 40358 21 -     83289 TTGT-T-TTT-------------C-----AG---A---------------A------AGA---GT-----ACT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 40
s Cricetulus_griseus.LT883664.1                          213112813 21 - 224834208 ATTC-T-TTT-------------T-----AG---A---------------A------AGA---GT-----ATT
i Cricetulus_griseus.LT883664.1                          C 0 I 41
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2359 21 +     87169 GTTA-T-TTC-------------C-----AG---G---------------A------AGA---GT-----GGT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 33
s Ctenodactylus_gundi.CteGun_scaffold_65                    642868 21 -   1526836 GTTA-T-TTT-------------C-----CA---A---------------A------AGA---AA-----ATT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3046 21 +     50838 GTTA-C-TTT-------------C-----AG---G---------------A------AGA---AT-----GTT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1637 21 +     36344 GTTA-C-TTT-------------C-----AG---G---------------A------AGA---AT-----ATT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108195  7 -   2246927 ----------------------------------------------------------GA---GT-----GGT
i Dasypus_novemcinctus.JH564415.1                        I 10 C 0
s Daubentonia_madagascariensis.ctg71                        290617 21 +  12879189 atga-t-ttt-------------c-----ag---g---------------a------aga---gt-----agt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862765 21 -  20541912 gctc-t-ttc-------------c-----ag---g---------------a------aga---at-----ggt
i Desmodus_rotundus.KZ672289.1                           C 0 I 27
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662498 21 -   1390856 gtta-t-ttc-------------c-----aa---g---------------a------aga---gt-----ggt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 27
s Diceros_bicornis.DicBicMic_scaffold_5955                  137283 21 -    198055 gtta-t-ttc-------------c-----aa---g---------------a------aga---gt-----ggt
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 27
s Dinomys_branickii.DinBra_scaffold_10381                    96512 21 -    115145 GTTA-C-TTT-------------C-----AG---G---------------A------AGA---AT-----ATT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948399 22 -  37912305 GTTATT-TTT-------------A-----AG---G---------------A------TGA---GT-----ATT
i Dipodomys_ordii.KN672350.1                             C 0 I 53
s Dipodomys_stephensi.DipSte_scaffold_89095                   3346 22 -     10735 GTTATT-TTT-------------A-----AG---G---------------A------TGA---GT-----ATT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 53
s Dolichotis_patagonum.DolPat_scaffold_80628                  7958 21 +     14636 GTTA-C-TTT-------------C-----AG---G---------------A------AGA---AT-----ATT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62851980  6 - 111700974 -----------------------------------------------------------A---TT-----GGT
i Echinops_telfairi.JH980293.1                           I 1 C 0
s Eidolon_helvum.AWHC01266696.1                               4331 21 +     19438 gtta-t-ttc-------------c-----ag---a---------------a------aga---at-----ggt
i Eidolon_helvum.AWHC01266696.1                          C 0 I 27
s Elephantulus_edwardii.JH947257.1                         9105509  6 -  10337057 -----------------------------------------------------------A---GT-----AGT
i Elephantulus_edwardii.JH947257.1                       I 10 C 0
s Ellobius_lutescens.LOEQ01008920.1                          28747 20 +    110024 attc-t-t-t-------------t-----aG---T---------------A------AGA---GT-----ATA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 418
s Ellobius_talpinus.LOJH01026522.1                           10724 20 +     18970 attc-t-t-t-------------t-----ag---T---------------A------AGA---GT-----ATT
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 417
s Enhydra_lutris.KZ291758.1                               24913981 21 +  41312741 gtcc-t-ttc-------------c-----ag---g---------------a------atg---gt-----ggt
i Enhydra_lutris.KZ291758.1                              C 0 I 27
s Eptesicus_fuscus.JH977646.1                             12576399 21 +  14770903 gtta-t-ttc-------------c-----ag---a---------------a------aga---at-----gtt
i Eptesicus_fuscus.JH977646.1                            C 0 I 27
s Equus_asinus.JREZ01000139.1                              3039481 21 -   4378816 gtta-t-ttc-------------c-----ag---g---------------a------aga---gg-----ggt
i Equus_asinus.JREZ01000139.1                            C 0 I 27
s Equus_caballus.CM000403.2                               21373415 21 +  39960074 gtta-t-ttc-------------c-----ag---g---------------a------aga---gg-----ggt
i Equus_caballus.CM000403.2                              C 0 I 27
s Equus_przewalskii.KK951119.1                              410201 21 -    498745 gtta-t-ttc-------------c-----ag---g---------------a------aga---gg-----ggt
i Equus_przewalskii.KK951119.1                           C 0 I 27
s Erythrocebus_patas.Contig38                               260564 21 +  21539334 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----ATT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12772 36 -     24895 ATTA-T-TTT-------------T-----AG---GATTAAAAATAAAATTA------AGA---GT-----GGT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40484 36 -     70999 ATTA-T-TTT-------------T-----AG---GATTAAAAATAAAATTA------AGA---GT-----GGT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84443 36 +    112731 ATTA-T-TTT-------------T-----AG---GATTAAAAATAAAATTA------AGA---GT-----GGT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41016 36 +     68309 ATTA-T-TTT-------------T-----AG---GATTAAAAATAAAATTA------AGA---GT-----GGT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51341 36 -     65740 ACTA-T-TTT-------------T-----AG---GATTAAAAATAAAATTA------AGA---GT-----GGT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                21971 36 -     75513 ATTA-T-TTT-------------T-----AG---GATTAAAAATAAAATTA------AGA---GT-----GGT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46164 36 -     97555 ATTA-T-TTT-------------T-----AG---GATTAAAAATAAAATTA------AGA---GT-----GGT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2891 36 +     30972 ATTA-T-TTT-------------T-----AG---GATTAAAAATAAAATTA------AGA---GT-----GGT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40614 36 -     52037 ATTA-T-TTT-------------T-----AG---GATTAAAAATAAAATTA------AGA---GT-----GGT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57015 36 -    111500 ATTA-T-TTT-------------T-----AG---GATTAAAAATAAAATTA------AGA---GT-----GGT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244790 21 - 206538554 gtta-t-ttc-------------c-----ag---g---------------a------aga---gt-----ggt
i Felis_catus.CM001381.2                                 C 0 I 27
s Felis_catus_fca126.CM031415.1                          185114576 21 - 205367284 gtta-t-ttc-------------c-----ag---g---------------a------aga---gt-----ggt
i Felis_catus_fca126.CM031415.1                          C 0 I 27
s Felis_nigripes.FelNig_flattened_line_31944                 25680 21 -     30238 gtta-t-ttc-------------c-----ag---g---------------a------aga---gt-----ggt
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 27
s Galago_moholi.ctg3793                                     122654 21 -    137831 gtta-t-ttt-------------c-----aa---g---------------a------aga---gt-----acc
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6194 21 +     22493 gtta-t-ttt-------------c-----aa---g---------------a------aga---gt-----agc
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18247 21 -     32986 gtta-t-ttt-------------c-----aa---g---------------a------aga---gt-----agc
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17106 16 +     18121 GTTC-T-TTT-------------C-----AG---G---------------A------ACA-------------
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 82
s Glis_glis.GliGli_scaffold_33859                            31989 21 -     36801 GCTA-T-TTT-------------C-----AT---G---------------A------AAT---GT-----ATT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3478 21 -      8343 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----AGT
i Gorilla_beringei.k141_3358147                          C 0 I 70
s Gorilla_gorilla.LT578341.1                                252489 21 - 186649187 atta-t-ttt-------------c-----ag---g---------------a------aga---gt-----agt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11308 21 +     11903 GTTA-T-TTT-------------C-----AT---G---------------A------AGA---GT-----ATT
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12700 36 -     40692 atta-t-ttt-------------t-----ag---gattaaaaataaaatta------aga---gt-----agt
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34101 36 +     49394 atta-t-ttt-------------t-----ag---gattaaaaataaaatta------aga---gt-----agt
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              58970 36 -     66874 atta-t-ttt-------------t-----ag---gattaaaaataaaatta------aga---gt-----agt
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7843 36 -     42923 atta-t-ttt-------------t-----ag---gattaaaaataaaatta------aga---gt-----agt
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14843 36 -     53142 atta-t-ttt-------------t-----ag---gattaaaaataaaatta------aga---gt-----agt
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28832 21 -    327341 GTAA-T-TTC-------------C-----AG---G---------------A------AGA---GT-----GGT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 27
s Heterocephalus_glaber.JH602082.1                         1925101 21 -  22651954 gtta-c-ttt-------------c-----ag---g---------------a------aga---at-----att
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548250 21 -   1711038 gtta-t-ttc-------------c-----ag---a---------------a------aga---AT-----GGT
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 27
s Hipposideros_galeritus.HipGal_scaffold_23202               47566 21 +     49977 gtta-t-ttc-------------c-----ag---a---------------a------aga---AT-----GGT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 27
s Hoolock_leuconedys.ctg274                                    140482 21 -    630532 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----AGT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67277 21 +     83186 GTTA-T-TTC-------------C-----AG---G---------------A------AGA---GT-----GAT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 27
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69425 21 +    143317 GTTA-C-TTT-------------C-----AG---G---------------A------AGA---AT-----ATT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 19
s Hylobates_agilis.k141_1155965                               3517 21 +     12352 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----AGT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10700 21 +     55766 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----AGT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050296 21 + 191637585 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----AGT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799174 21 +  11177569 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----AGT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384824 21 +   7955117 gTCA-T-TTT-------------C-----AG---G---------------A------ACA---AT-----TCT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 41
s Indri_indri.k141_2415743                                     356 35 +     11955 ATTA-T-TTT-------------T-----AG---GAT-AAAAATAAAATAA------AGA---GT-----AGT
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237236 27 +   9596543 ATAc-t-ttt-------------c-----ag---a---------------gaaaaagaga---gt-----att
i Jaculus_jaculus.JH725527.1                             C 0 I 47
s Lagothrix_lagothricha.k141_246028                          41300 21 +    110728 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59874 21 -     65777 gtta-t-ttc-------------c-----ag---a---------------a------aaa---at-----ggt
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 27
s Lemur_catta.scaffold_24                                 14757491 36 +  30322482 ATTA-T-TTT-------------T-----AG---GATTAAAAATAAAATTA------AGA---GT-----AGT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1969 19 -     13097 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----C--
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1920 19 +      5940 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----C--
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1551 22 -      5717 ATTA-T-TTT-------------T-----GG---G---------------A------GGAGGAGT-----C--
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8166 21 -     11567 ATTA-T-TAT-------------T-----GG---G---------------A------GGA---GG-----AGT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9547 21 -     12945 ATTA-T-TAT-------------T-----GG---G---------------A------GGA---GG-----AGT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7026 12 +     29618 ATTA-T-TTT-------------T-----GG---G--------------------------------------
i Lepilemur_ankaranensis.k141_567626                     C 0 I 12
s Lepilemur_dorsalis.k141_387009                              7023 12 +     31569 ATTA-T-TTT-------------T-----AG---G--------------------------------------
i Lepilemur_dorsalis.k141_387009                         C 0 I 12
s Lepilemur_ruficaudatus.k141_330196                          7033 12 +     24756 atta-t-ttt-------------t-----ag---g--------------------------------------
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 12
s Lepilemur_septentrionalis.k141_360456                       7027 12 +     16388 ATTA-T-TTT-------------T-----AG---G--------------------------------------
i Lepilemur_septentrionalis.k141_360456                  C 0 I 12
s Leptonychotes_weddellii.KB714746.1                        811330 21 -   3914936 gtca-t-ttc-------------c-----ag---a---------------a------ata---gt-----ggt
i Leptonychotes_weddellii.KB714746.1                     C 0 I 27
s Lepus_americanus.LepAme_scaffold_56121                     15943 21 +     24238 GTCC-T-GTT-------------T-----AG---A---------------G------AGA---GT-----AGT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330668 21 -   1826925 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8408 21 +     19643 GTTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----ATT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042069 21 -   6120653 GTTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----ATT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078323  7 +  43346337 ----------------------------------------------------------GA---AT-----GGT
i Loxodonta_africana.GL010049.1                          I 16 C 0
s Lycaon_pictus.CM007581.1                                41612716 21 +  59628241 gtca-t-ttc-------------t-----ag---g---------------a------aca---gt-----ggt
i Lycaon_pictus.CM007581.1                               C 0 I 31
s Macaca_arctoides.k141_1757516                              42985 21 -     61512 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370646 21 -  60120075 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22901 21 +     30207 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20004 21 -     24934 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22853 21 +     30527 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34043 21 -     50087 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43814 21 +     51645 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                412982 21 - 187317192 atta-t-ttt-------------c-----ag---g---------------a------AGA---GC-----AGT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397205 21 +  25927173 atta-t-ttt-------------c-----ag---g---------------a------AGA---GC-----AGT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46369 21 -     62418 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23024 21 +     24253 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42845 21 +     59329 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268778 21 +    668171 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 19959 21 +     21031 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  556 21 +     17132 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221296 21 -    270270 gtta-t-ttc-------------c-----ag---a---------------a------aga---at-----ggt
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 27
s Mandrillus_leucophaeus.scaffold280                        320056 21 +  24302211 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354888 21 -    752769 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671581 26 -    737560 atta-t-ttc-------------c-----ag---g---------------a------aga---gtgatgtgat
i Manis_javanica.JSZB01003497.1                          C 0 I 27
s Manis_pentadactyla.KN006162.1                             218874 26 +    317179 atta-t-ttc-------------c-----ag---g---------------a------aca---gTGATGTGAT
i Manis_pentadactyla.KN006162.1                          C 0 I 24
s Marmota_marmota.CZRN01000018.1                           7499034 21 +  40650429 gtCA-T-TTT-------------C-----AG---G---------------A------AGA---AT-----ACT
i Marmota_marmota.CZRN01000018.1                         C 0 I 41
s Megaderma_lyra.MegLyr_scaffold_4542                       148496 21 +    207569 gtta-t-tac-------------t-----ag---a---------------a------gga---at-----gat
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 26
s Mellivora_capensis.MelCap_flattened_line_19308             23850 21 -     74585 gtcc-t-ttc-------------c-----ag---g---------------a------ata---gt-----ggt
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 27
s Meriones_unguiculatus.MerUng_scaffold_7390                 46728 11 -    140813 ATTT-A-TTT-------------T-----AG------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 48
s Mesocricetus_auratus.KB708134.1                         17427373 21 +  29670104 attc-t-ttt-------------t-----ag---A---------------A------AGA---GT-----ATT
i Mesocricetus_auratus.KB708134.1                        C 0 I 41
s Mico_argentatus.k141_582562                                 7929 21 +     17804 ATTA-T-TTT-------------G-----GG---G---------------A------GGA---GG-----AGT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8713 21 -     12984 ATTA-T-TTT-------------G-----GG---G---------------A------GGA---GG-----AGT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16664 21 -     26561 ATTA-T-TTT-------------G-----GG---G---------------A------GGA---GG-----AGT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43066  6 +    145209 -----------------------------------------------------------A---AT-----GGT
i Microgale_talazaci.MicTal_scaffold_6613                I 1 C 0
s Microcebus_murinus.CM007674.1                           74982638 12 +  93316391 atta-t-ttt-------------t-----ag---g--------------------------------------
i Microcebus_murinus.CM007674.1                          C 0 I 18
s Micronycteris_hirsuta.MicHir_scaffold_2233                182713 21 +    200668 gtta-t-ttc-------------c-----ag---a---------------a------aga---at-----ggt
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 27
s Miniopterus_natalensis.LDJU01000034.1                    6360814 21 -   8254450 gtta-t-ttc-------------c-----gg---a---------------a------aga---at-----agt
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 27
s Miniopterus_schreibersii.MinSch_scaffold_23309             39715 21 -     48117 GTTA-T-TTC-------------C-----AG---A---------------A------AGA---AT-----AGT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 27
s Miopithecus_ogouensis.k141_1534655                         20083 21 -     27822 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6337 21 +     27589 gtca-t-ttc-------------c-----ag---a---------------a------ata---gt-----ggt
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 27
s Mirza_zaza.k141_766280                                     50429 12 -     62432 atta-t-ttt-------------t-----ag---a--------------------------------------
i Mirza_zaza.k141_766280                                 C 0 I 18
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176896 21 +    366855 GTTA-T-TTC-------------C-----AG---A---------------A------AGA---AC-----AGT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 27
s Mungos_mungo.MunMun_flattened_line_18455                   16594 21 -     63510 GTAA-T-TTC-------------C-----AG---G---------------A------AGA---AT-----GGT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 27
s Murina_feae.MurFea_scaffold_17764                          36743 21 +     47283 GTTA-T-TTC-------------C-----AG---A---------------A------AGA---AT-----GTT
i Murina_feae.MurFea_scaffold_17764                      C 0 I 27
s Mus_caroli.FMAL02030609.1                                   4802 21 +      5579 attC-T-CCT-------------T-----AG---G---------------A----AGA-----GT-----ATT
i Mus_caroli.FMAL02030609.1                              C 0 I 40
s Mus_musculus.chr8                                       41685505 21 + 129401213 attc-t-CCT-------------T-----AG---G---------------A----AGA-----GT-----ATT
i Mus_musculus.chr8                                      C 0 I 40
s Mus_spretus.CM004101.1                                  39494823 21 + 130317789 attc-t-CCT-------------T-----AG---G---------------A----AGA-----GT-----ATT
i Mus_spretus.CM004101.1                                 C 0 I 40
s Muscardinus_avellanarius.MusAve_scaffold_12866             80589 21 -     86153 GTTA-T-TTA-------------C-----TT---G---------------A------AGA---GT-----ATT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14352794 21 +  14710649 gtcc-t-ttc-------------c-----ag---g---------------a------ata---gt-----ggt
i Mustela_putorius.JH418006.1                            C 0 I 27
s Myotis_brandtii.KE162005.1                               9790788 21 +  10118263 gtta-t-ttc-------------c-----ag---a---------------a------aga---at-----gtt
i Myotis_brandtii.KE162005.1                             C 0 I 27
s Myotis_davidii.KB100139.1                                4385150 21 +   6019432 gtta-t-ttc-------------c-----ag---a---------------a------aga---at-----gtt
i Myotis_davidii.KB100139.1                              C 0 I 27
s Myotis_lucifugus.GL429869.1                               380970 21 +   4330536 gtta-t-ttc-------------c-----ag---a---------------a------aga---at-----gtt
i Myotis_lucifugus.GL429869.1                            C 0 I 27
s Myotis_myotis.MyoMyo_scaffold_185951                        3529 21 +      3929 gtta-t-ttc-------------c-----ag---a---------------a------aga---at-----gtt
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 I 76
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117623 16 +    130748 GCGT-TTATT-------------TCAGGAG-------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 7
s Nasalis_larvatus.k141_1350636                              26664 21 +     34575 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466938 21 -  31847680 gtca-t-ttc-------------c-----ag---a---------------a------ata---gt-----ggt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 27
s Noctilio_leporinus.NocLep_scaffold_7894                   125691 21 -    149072 GTTA-T-TTC-------------C-----AG---A---------------A------AGA---AT-----GGT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51406 21 -    132029 ATTA-T-TTT-------------C-----AA---G---------------A------AGA---GT-----AGT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7501 21 -     16345 ATTA-T-TTT-------------C-----AA---G---------------A------AGA---GT-----AGT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13386 21 +     22201 ATTA-T-TTT-------------C-----AA---G---------------A------AGA---GT-----AAT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411670 21 -  22158432 ATTA-T-TTT-------------C-----AA---G---------------A------AGA---GT-----AGT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23784 21 -     54323 ATTA-T-TTT-------------C-----AA---G---------------A------AGA---GT-----AGT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196317 21 +   9404916 gtca-t-ttc-------------t-----ag---g---------------a------aca---gt-----ggt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 32
s Nycticebus_bengalensis.LG01                             93634420 21 + 196305487 GTTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----AGT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1178 21 -      3937 GTTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----AGT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562659 21 - 199412804 GTTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----AGT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549329 21 -   3988456 NNNN-N-NNN-------------N-----NN---N---------------N------NNN---NN-----NNN
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045554 21 -  11899542 gtta-c-ttt-------------c-----ag---a---------------a------aaa---at-----att
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449537 21 +   2017862 gtca-t-ttc-------------c-----ag---g---------------a------ata---gt-----ggt
i Odobenus_rosmarus.KB229312.1                           C 0 I 25
s Ondatra_zibethicus.OndZib_scaffold_7387                    90501 21 -    140218 ATTCCT-T-T-------------T-----AG---A---------------A------AGC---GT-----AGT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 424
s Onychomys_torridus.OnyTor_scaffold_2487                   105313 21 +    107918 ATTC-T-TTT-------------T-----AG---A---------------A------AGA---GT-----ACT
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 I 41
s Orycteropus_afer.OryAfe_flattened_line_171931              11430  7 -     14239 ----------------------------------------------------------ga---gT-----GGT
i Orycteropus_afer.OryAfe_flattened_line_171931          I 10 C 0
s Oryctolagus_cuniculus.CM000791.1                       107101800 17 - 174332312 -----N-NNN-------------N-----NN---N---------------N------NNN---NN-----NNN
i Oryctolagus_cuniculus.CM000791.1                       I 1191 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37354 21 +    559221 gtca-t-ttc-------------t-----ag---g---------------a------aca---gt-----ggt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 32
s Otolemur_crassicaudatus.k141_649260                        37802 21 -     51505 gtta-t-ttt-------------c-----aa---g---------------a------aga---gt-----agc
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350805 21 +   1103335 GTTA-T-TTT-------------C-----AA---G---------------A------AGA---GT-----AGC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470494 21 - 189151597 atta-t-ttt-------------c-----ag---G---------------A------AGA---GT-----AGT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22500 21 -    230217 gtta-t-ttc-------------c-----ag---g---------------a------aga---gt-----gtt
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 27
s Panthera_pardus.KV860321.1                              18459826 21 -  18783137 gtta-t-ttc-------------c-----ag---g---------------a------aga---gt-----ggt
i Panthera_pardus.KV860321.1                             C 0 I 27
s Panthera_tigris.KE722367.1                               3970546 21 +   8748460 gtta-t-ttc-------------c-----ag---g---------------a------aga---gt-----ggt
i Panthera_tigris.KE722367.1                             C 0 I 27
s Papio_anubis.CM001495.2                                   240896 21 - 183742232 atta-t-ttt-------------c-----ag---g---------------a------AGA---GC-----AGT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7360 21 +     21308 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288399 21 -  20919399 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20015 21 -     27687 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13151 21 +     16796 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19961 21 -     23640 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13153 21 +     78924 GTAA-T-TTC-------------C-----GG---G---------------A------AGA---GT-----GGT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 24
s Perodicticus_ibeanus.k141_1921260                          25411 23 +     31479 AATA-T-TTTGGAGAGTTATCTAC-----A-------------------------------------------
i Perodicticus_ibeanus.k141_1921260                      I 1325 T 1327
s Perodicticus_potto.k141_1854441                            17780 23 -     24908 AATA-T-TTTGGAGAGTTATCTAC-----A-------------------------------------------
i Perodicticus_potto.k141_1854441                        I 1335 T 1337
s Perognathus_longimembris.PerPac_flattened_line_28053       37597 21 +     38305 GTAT-T-TTT-------------A-----AG---A---------------A------TGA---GT-----ATT
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 I 53
s Peromyscus_maniculatus.KI615324.1                         244961 21 +  18517816 attc-t-ttt-------------t-----ag---A---------------A------AGA---GT-----ACT
i Peromyscus_maniculatus.KI615324.1                      C 0 I 41
s Petromus_typicus.PetTyp_scaffold_17301                     30025 21 -     56120 ATTA-C-TTT-------------C-----AG---G---------------A------AGA---AT-----ATT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             179 21 +     55023 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             180 21 +     40849 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  251928 21 +  14605196 attg-t-ttt-------------c-----ag---G---------------A------AGA---GC-----AGT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              921 21 +     22231 gtta-t-ttc-------------c-----ag---a---------------a------aga---at-----gtt
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 27
s Pithecia_albicans.k141_1239476                             62935 21 +    207309 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4031 21 -     25401 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29770 21 +     58159 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30046 21 +     63561 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29809 21 +     51148 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554778 21 -   4542175 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29793 21 +     51125 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----AGT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6210 12 +     39866 -----------------------------GG---G---------------A------GGA---GT-----AGT
i Plecturocebus_bernhardi.k141_2549090                   I 8 C 0
s Plecturocebus_brunneus.k141_862875                          1295 12 -      9282 -----------------------------GG---G---------------A------GGA---GT-----AGT
i Plecturocebus_brunneus.k141_862875                     I 8 C 0
s Plecturocebus_caligatus.k141_1382851                       40699 12 -     87950 -----------------------------GG---G---------------A------GGA---GT-----AGT
i Plecturocebus_caligatus.k141_1382851                   I 8 C 0
s Plecturocebus_cinerascens.k141_1164729                     41092 12 -     88961 -----------------------------GG---G---------------A------GGA---GT-----AGT
i Plecturocebus_cinerascens.k141_1164729                 I 8 C 0
s Plecturocebus_cupreus.k141_2351393                          5791 12 -     39403 -----------------------------GG---G---------------A------GGA---GT-----AGT
i Plecturocebus_cupreus.k141_2351393                     I 8 C 0
s Plecturocebus_dubius.k141_1058799                          40743 12 +     87928 -----------------------------GG---G---------------A------GGA---GT-----AGT
i Plecturocebus_dubius.k141_1058799                      I 8 C 0
s Plecturocebus_grovesi.k141_2013005                          5788 12 -     60166 -----------------------------GG---G---------------A------GGA---GT-----AGT
i Plecturocebus_grovesi.k141_2013005                     I 8 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12724 12 -     67232 -----------------------------GG---G---------------A------GGA---GT-----AGT
i Plecturocebus_hoffmannsi.k141_3303950                  I 8 C 0
s Plecturocebus_miltoni.k141_349282                          40640 12 -     90634 -----------------------------GG---G---------------A------GGA---GT-----AGT
i Plecturocebus_miltoni.k141_349282                      I 8 C 0
s Plecturocebus_moloch.k141_1031110                          42108 12 +     89403 -----------------------------GG---G---------------A------GGA---GT-----AGT
i Plecturocebus_moloch.k141_1031110                      I 8 C 0
s Pongo_abelii.CM009266.2                                   175634 21 - 189387572 atta-t-ttt-------------c-----ag---G---------------A------AGA---GT-----AGT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190452 21 -   9816681 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----AGT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25278 21 +     69807 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42473 21 -     80239 attg-t-ttt-------------c-----ag---g---------------a------aga---gc-----agt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980647 36 +   4620579 atta-t-ttt-------------t-----ag---gattaaaaataaaatta------aga---gt-----agT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564115 35 -   2598838 atta-t-ttt-------------t-----ag---g-ataaaaataaaataa------aga---gt-----agT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1751 35 -      7103 atta-t-ttt-------------t-----ag---g-gtaaaaataaaataa------aga---gt-----agt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2348 35 -     11706 atta-t-ttt-------------t-----ag---g-ataaaaaTAAAATAA------AGA---GT-----AGT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6084 35 -     30655 atta-t-ttt-------------t-----ag---g-ataaaaaTAAAATAA------AGA---GT-----AGT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32409 35 +     46564 ATTA-T-TTT-------------T-----AG---GAT-AAAAATAAAATAA------AGA---GT-----AGT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92680 35 -     98465 atta-t-ttt-------------t-----ag---g-agaaaaaTAAGATAA------AGA---GT-----AGT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6317 35 +     35169 atta-t-ttt-------------t-----ag---g-gtaaaaataaaataa------aga---gt-----agt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34266 25 +     52041 attt-a-ttt-------------t-----agaaag---------------aa-----aga---gt-----aTT
i Psammomys_obesus.NESX01036366.1                        C 0 I 40
s Pteronotus_parnellii.KE847780.1                            49956 20 -     66298 gTCA-T-TTT-------------C-----AG---A---------------A------GGG---AT------GT
i Pteronotus_parnellii.KE847780.1                        C 0 I 27
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2570 21 -     18639 gtcc-t-ttc-------------c-----ag---g---------------a------ata---gt-----ggt
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 27
s Pteropus_alecto.KB030862.1                               5838924 21 -  28871421 gtta-t-ttc-------------c-----ag---a---------------a------aga---at-----ggt
i Pteropus_alecto.KB030862.1                             C 0 I 27
s Pteropus_vampyrus.KN525825.1                             3535490 21 -   4952924 gtta-t-ttc-------------c-----ag---a---------------a------aga---at-----ggt
i Pteropus_vampyrus.KN525825.1                           C 0 I 27
s Puma_concolor.QAVW01001104.1                            18097143 21 +  38429054 gtta-t-ttc-------------c-----ag---g---------------a------aga---gt-----ggt
i Puma_concolor.QAVW01001104.1                           C 0 I 27
s Pygathrix_cinerea.k141_1153803                             24688 21 +     91421 ATTG-T-TTT-------------C-----GG---G---------------A------AGA---GC-----GGT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151181 21 -   7812017 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----GGT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5558 21 +     72585 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----GGT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020718 19 -  90668790 attc-t-CTT-------------T-----AG---A---------------A------A-----TT-----ATT
i Rattus_norvegicus.chr16                                C 0 I 40
s Rhinolophus_sinicus.LVEH01000134.1                       2911589 21 +   3329780 gttg-t-ttc-------------c-----ag---A---------------A------AGA---AT-----GGT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 27
s Rhinopithecus_bieti.k119_221883                            26498 21 +     27361 attg-t-ttt-------------c-----ag---g---------------a------aga---gc-----agt
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119865 21 + 195417433 attg-t-ttt-------------c-----ag---G---------------A------AGA---GC-----AGT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234106 21 -   7961872 attg-t-ttt-------------c-----ag---g---------------a------aga---gc-----agt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72906 21 -    116970 gtta-t-ttc-------------c-----ag---a---------------a------aga---at-----ggt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 27
s Saguinus_bicolor.k141_1429097                               1867 14 +     27962 -------TTT-------------T-----GG---G---------------A------GGA---GT-----C--
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1875 14 +      6077 -------TTT-------------T-----GG---G---------------A------GGA---GT-----C--
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1907 19 +      5971 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----C--
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1961 19 +      5932 ATTA-T-TTT-------------C-----GG---G---------------A------GGA---GT-----C--
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               145 19 -      4390 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----C--
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389215 14 - 209938924 -------TTT-------------T-----GG---G---------------A------GGA---GT-----C--
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1909 19 +      5979 ATTA-T-TTT-------------T-----GG---G---------------A------GGA---GT-----C--
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2262 14 -      4301 -------TTT-------------T-----GG---G---------------A------GGA---GT-----C--
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236366 21 +   5703754 ATTA-T-TTC-------------T-----GG---G---------------A------GGA---GT-----AGT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5956 21 +     21866 ATTA-T-TTC-------------T-----GG---G---------------A------GGA---GT-----AGT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114122 21 +    313613 gtta-c-ttc-------------c-----aa---a---------------g------agt---gg-----ggt
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 27
s Semnopithecus_entellus.k141_158471                         23005 21 +     27374 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26524 21 +     58920 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13020 21 -     45317 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20678 21 -     42441 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23358 21 -     29113 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26427 21 -     48123 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46825 21 +     77746 ATTC-T-TTC-------------T-----GG---A---------------A------AGA---GT-----ATT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 41
s Solenodon_paradoxus.SolPar_flattened_line_126            1856415 21 -   1910179 gcta-t-tgc-------------a-----ag---g---------------a------gga---gt-----ggt
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866392 21 +   3870691 gTCA-T-TTT-------------C-----AG---G---------------A------ACA---AT-----TCT
i Spermophilus_dauricus.KZ294078.1                       C 0 I 41
s Spilogale_gracilis.SpiGra_flattened_line_13525              4569 21 -     97271 gtca-t-ttc-------------c-----ag---g---------------a------ata---gt-----ggt
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 27
s Suricata_suricatta.SurSur_flattened_line_6629             122993 21 +    196729 GTAA-T-TTC-------------C-----AG---G---------------A------AGA---AT-----GGT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 27
s Symphalangus_syndactylus.tarseq_199                       388943 21 +   1523678 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----AGT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11731 21 +     22964 gtta-c-tcc-------------c-----ag---a---------------a------aga---at-----ggt
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 27
s Tamandua_tetradactyla.TamTet_scaffold_224794                 743 16 +      5583 GCAT-TTATT-------------TCAGGAG-------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 7
s Tapirus_indicus.TapInd_scaffold_7432                      189659 21 +    199430 GTTA-T-TTC-------------C-----AG---G---------------A------AGA---AG-----GGT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 26
s Tapirus_terrestris.TapTer_scaffold_755                    103613 21 -    539355 GTTA-T-TTC-------------C-----AG---G---------------A------AGA---AG-----GGT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 26
s Tarsius_lariang.k141_1780720                                4984 21 +      6850 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----AGT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5025 21 +     20590 ATTA-T-TTT-------------C-----AG---G---------------A------AGA---GT-----AGT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350882 21 - 186847797 atta-t-ttt-------------c-----ag---g---------------a------AGA---GC-----AGT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22354 21 -     33621 GTTA-C-TTT-------------C-----AG---G---------------A------AGA---AT-----ATT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17883  7 -     31044 ----------------------------------------------------------GA---GT-----GAT
i Tolypeutes_matacus.TolMat_scaffold_31955               I 10 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477774 21 -    610378 gtta-t-ttc-------------c-----ag---c---------------a------aga---at-----ggc
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 27
s Trachypithecus_auratus.k141_1189070                        18569 21 +     26378 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31234 21 -     78344 ATTG-T-GTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17890 21 +     25722 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26115 21 -     62838 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26232 21 +     46913 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7040 21 -     28527 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28054 21 -     64340 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26091 21 -     63452 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7534 21 +     22490 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          962 21 -      6147 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7937 21 -     13050 attg-t-gtt-------------c-----ag---g---------------a------aga---gc-----agt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253176 21 -   6242583 attg-t-ttt-------------c-----ag---g---------------a------aga---gc-----agt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58926 21 +     59866 ATTG-T-TTT-------------C-----AG---G---------------A------AGA---GC-----AGT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831957 21 -   4065304 GTTA-T-TTC-------------C-----AG---G---------------G------AAA---AT-----AGT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6237 21 -     70247 gtca-t-ttc-------------c-----ag---g---------------g------aaa---at-----agt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105345 21 -    105689 ATTC-T-TTC-------------C-----AA---A---------------G------TGT---GT-----GGT
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 I 28
s Ursus_maritimus.KK499267.1                                179919 21 +   5085361 gtcc-t-ttc-------------c-----ag---a---------------a------ata---gt-----ggt
i Ursus_maritimus.KK499267.1                             C 0 I 27
s Varecia_rubra.k141_787544                                  23291 36 -     30710 ATTA-T-CTT-------------T-----AG---GATTAAACATAAAATAA------AGA---GT-----AGT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22198 36 -    147434 ATTA-T-TTT-------------T-----AG---GATTAAACATAAAATAA------AGA---GT-----AGT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103077 21 -    112863 gtca-t-ttc-------------t-----ag---g---------------a------aca---gt-----ggt
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 31
s Xerus_inauris.XerIna_scaffold_2302                        172162 21 -    224448 gtca-t-ttt-------------c-----ag---g---------------a------aga---gt-----act
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 40
s Zalophus_californianus.ZalCal_flattened_line_17732         26735 21 -     86975 gtca-t-ttc-------------c-----ag---g---------------a------ata---gt-----ggt
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 27
s Zapus_hudsonius.ZapHud_scaffold_230229                      1407 21 +      2695 ATAC-T-TTT-------------C-----AG---A---------------G------ATA---GT-----ATT
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 9 I 48
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Ailurus_fulgens.LNAC01001112.1                            212097 1282 +    347723 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215754  5 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15959754 826 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3162 70 +     36723 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--TAC-----C--------A------------------TGTCCCC-----TGATT---------------GT---A-------T-----------------TCTATTCA--TGCATCTCT-------------AAT
s Acinonyx_jubatus.LLWD01001279.1                           810928 59 +   1699592 ---------------------------------------------------------------c--------ataccACAGT-ATTGGCA-TGTTGCC-----TAATA---------------GT---AGTCACATC-----------------TCTAGTCA--CA--TCTCT-------------AAT
i Acinonyx_jubatus.LLWD01001279.1                        I 27 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18037 37 +     63021 -----------------------------------------------------------------------------------------------------------G---------------CT---A-------TAAAA--CTTAAAAAT-ACACAGTTA--CATACCCCT-------------A--
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 40 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413447 54 +  29979442 ---------------------------------------------------------------c--------gtactgTGGT-ATTTGCA-TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTCC--CATATCTCT-------------CAT
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 27 C 0
s Ailurus_fulgens.LNAC01001112.1                            213379 16 +    347723 --------------------------------------------------------------------------------------------------------------------------------------------------------------atca--caTGTTTCT-------------CAT
i Ailurus_fulgens.LNAC01001112.1                         I 1282 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16123 24 -     61208 ---------------------------------------------------------------------------------------------------------------------------GC---A-------A-----------------TCTAGTGA--TACATCTTT-------------AAT
i Allactaga_bullata.AllBul_scaffold_20030                I 47 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45557 81 +     53615 gagcaa-------t--g-------ctg-t--ttattca-a-ctc--tggtc-a--cac-----c--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CACATCTCT-------------AAT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41497 81 +     44087 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGATC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCTTT---------------GT---A-------C-----------------TCTACTCA--CACATCTCT-------------AAT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14137 81 -     21945 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGATC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CACATCTCT-------------AAT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15813 81 +     32033 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGATC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CACATCTCT-------------AAT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70266 76 -     84148 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCACT---------------GT---A-------C-----------------ACTATTCA--CACATCTCT-------------AAT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42499 76 -     78289 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCACT---------------GT---A-------C-----------------ACTATTCA--CACATCTCT-------------AAT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             41945 76 +     55831 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCACT---------------GT---A-------C-----------------ACTATTCA--CACATCTCT-------------AAT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40387 76 -     64179 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCACT---------------GT---A-------C-----------------ACTATTCA--CACATCTCT-------------AAT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22033 76 -     24835 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCACT---------------GT---A-------C-----------------ACTATTCA--CACATCTCT-------------AAT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39016 76 +     45454 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCACT---------------GT---A-------C-----------------ACTATTCA--CACATCTCT-------------AAT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44714 76 +     70886 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGAA-TGTCCCT-----TCACT---------------GT---A-------C-----------------ACTATTCA--CACATCTCT-------------AAT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6839 76 +     30854 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCACT---------------GT---A-------C-----------------ACTATTCA--CACATCTCT-------------AAT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             30978 76 +     42133 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCACT---------------GT---A-------C-----------------ACTATTCA--CACATCTCT-------------AAT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174789 49 -    412891 ---------------------------------------------------------------CAT--A-TTA--------T--T-GGCA-TGGCAGT-----TAATA---------------GT---A-------C-----------------ACTAGTCA--CTCATCTCT-------------AAG
i Anoura_caudifer.AnoCau_scaffold_1412                   I 27 C 0
s Aotus_azarae.k141_118258                                   48788 76 -     65372 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---A-------C-----------------TCGATTCA--CACATCTCT-------------AAT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42535 76 +     43593 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---A-------C-----------------TCGATTCA--CACATCTCT-------------AAT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670548 76 +   5030052 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---A-------C-----------------TCGATTCA--CACATCTCT-------------AAT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22190 76 -     23494 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---A-------C-----------------TCGATTCA--CACATCTCT-------------AAT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7326 76 +      8415 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---A-------C-----------------TCGATTCA--CACATCTCT-------------AAT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14102 32 -     32367 GAT--G-------T--G-------CTG-T--TTATTTA-A-CTG--TGGTC-A--TAC-----C--------T--------------------------------------------------------------------------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 45
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3075 49 -     15198 ---------------------------------------------------------------CAT-GT-T-A--------T--T-GGCA-TGGCACT-----TAATA---------------GT---A-------C-----------------ACTAGTCA--CTCATCTCT-------------AAC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 27 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272778 76 +  21539123 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCACT---------------GT---A-------C-----------------ACTATTCA--CACATCTCT-------------AAT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               8945 76 +     48076 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCACT---------------GT---A-------C-----------------ACTATTCA--CACATCTCT-------------AAT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4082 76 -     28759 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCACT---------------GT---A-------C-----------------ACTATTCA--CACATCTCT-------------AAT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31635 76 +     44353 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCACT---------------GT---A-------C-----------------ACTATTCA--CACATCTCT-------------AAT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47006 76 -     71267 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCACT---------------GT---A-------C-----------------ACTATTCA--CACATCTCT-------------AAT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21065 76 -     33135 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCACT---------------GT---A-------C-----------------ACTATTCA--CACATCTCT-------------AAT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4266 85 +     11645 gaggaa-------t--g-------ctg-t--tcatgcc-a-ctc--tggtc-a--cac-----cATTCA-T-A-------GT-ATTGGCG-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TTCATTCA--CACAGCTCT-------------AAT
i Avahi_laniger.k141_2756659                             I 18 C 0
s Avahi_peyrierasi.k141_1823318                               4272 85 -     19611 gaggaa-------t--g-------ctg-t--tcatgcc-a-ctc--tggtc-a--cac-----cATTCA-T-A-------GT-ATTGGCG-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCCATTCA--CACAGCTCT-------------AAT
i Avahi_peyrierasi.k141_1823318                          I 18 C 0
s Cacajao_ayresi.k141_96119                                   5969 76 +     28062 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---T-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41263 76 -     91139 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-G--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---T-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18789 76 +     95584 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---T-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18702 76 +    119600 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---T-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8178 75 +     18648 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGATC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCCTT---------------GT---A-------C-----------------T-GATTCA--CACATCTCT-------------AAT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7839 76 -     13885 AAGCAA-------T--G-------CTG-T--TCATTCA-G-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCCTC---------------GT---A-------C-----------------TCGATTCA--CACATCTCC-------------AGT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16539 75 +     17162 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GG-A-TGTCCCT-----TCCTT---------------GT---A-------T-----------------TCGATTCA--CACATCTCT-------------AAT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451494 75 + 189096842 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GG-A-TGTCCCT-----TCCTT---------------GT---A-------T-----------------TCGATTCA--CACATCTCT-------------AAT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17787 75 -     18408 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GG-A-TGTCCCT-----TCCTT---------------GT---A-------T-----------------TCGATTCA--CACATCTCT-------------AAT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503499 35 +  60362399 -------------------------------------------------------------------------------------------TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTC---CACATCTCT-------------AAT
i CanFam4.chr16                                          I 31 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7135 35 -     23171 -------------------------------------------------------------------------------------------TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTC---CACATCTCT-------------AAT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 31 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220478 35 +   9314153 -------------------------------------------------------------------------------------------TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTC---CACATCTCT-------------AAT
i Canis_lupus_dingo.QKWQ01000480.1                       I 31 C 0
s Canis_lupus_familiaris.chr16                            41613613 35 +  59632846 -------------------------------------------------------------------------------------------TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTC---CACATCTCT-------------AAT
i Canis_lupus_familiaris.chr16                           I 31 C 0
s Canis_lupus_orion.HG994398.1                            45105194 35 -  63665305 -------------------------------------------------------------------------------------------TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTC---CACATCTCT-------------AAT
i Canis_lupus_orion.HG994398.1                           I 31 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3158 36 +      5315 -------------------------------------------------------------------------------------------TGGCACT-----TAATA---------------GT---A-------C-----------------GCTAGTCA--CTCATCTCT-------------AAC
i Carollia_perspicillata.CarPer_scaffold_170178          I 40 I 222
s Carlito_syrichta.NW_007259797.1                           268313 36 +    496798 GAGAAA-------T--G-------GTA-T--TTATGCA-A-CTC--TTGTC-AGGTTA-----T--------A--------------------------------------------------------------------------------------------------------------------
i Carlito_syrichta.NW_007259797.1                        C 0 I 26
s Cavia_aperea.AVPZ01000300.1                              4994035 34 +  23392119 gagaga-------t--g-------ctg-t--ttatgcA-A-CTA--CTGTT-A--TAG-----C--------A--------------------------------------------------------------------------------------------------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 42
s Cavia_porcellus.DS562891.1                               4997477 34 +  23407841 gagaga-------t--g-------ctg-t--ttatgcA-A-CTA--CTGTT-A--TAG-----C--------A--------------------------------------------------------------------------------------------------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 42
s Cavia_tschudii.CavTsc_scaffold_23560                       60578 34 -     66877 GAGAGA-------T--G-------CTG-T--TTATGCA-A-CTA--CTGTT-A--TAG-----C--------A--------------------------------------------------------------------------------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 42
s Cebuella_niveiventris.k141_592277                           3071 75 -     12580 AAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCCTT---------------GT---A-------C-----------------T-GATTCA--CACATCTCT-------------AAT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               40957 75 +     53515 AAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCCTT---------------GT---A-------C-----------------T-GATTCA--CACATCTCT-------------AAT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369167 76 -  26074798 AAGCAA-------T--G-------CTG-T--TCATGCA-G-CTC--TGGTC-G--TGG-----C--------A-----C--T----GGGA-TGGCCCC-----TCATT---------------GT---C-------C-----------------TCGATTCA--CACATCTCT-------------AAT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6056 76 -     34880 AAGCAA-------T--G-------CTG-T--TCATGCA-G-CTC--TGGTC-G--TGG-----C--------A-----C--T----GGGA-TGGCCCC-----TCATT---------------GT---C-------C-----------------TCGATTCA--CACATCTCT-------------AAT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65151 76 -     89041 AAGCAA-------T--G-------CTG-T--TCATGCA-G-CTC--TGGTC-G--TGG-----C--------A-----C--T----GGGA-TGGCCCC-----TCATT---------------GT---C-------C-----------------TCGATTCA--CACATCTCT-------------AAT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1486 62 -      1636 GAGAAA-------T--G-------GTA-T--TTATGCA-A-CTC--TTGTC-AGGTTA-----C--------A-------GT-ATTGGCA-TGCCATA-----TAAGA---------------GT---G-------C-----------------T----------------------------------
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490254 54 -  27778364 ---------------------------------------------------------------A--------ATACCATTGT-ATTGGCA-TGTTGCT-----TAATA---------------GT---A-------C-----------------TCCAGTCA--CACATGTCT-------------AAT
i Ceratotherium_simum.JH767749.1                         I 27 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17087 54 +     27315 ---------------------------------------------------------------A--------ATACCATTGT-ATTGGCA-TGTTGCT-----TAATA---------------GT---A-------C-----------------TCCAGTCA--CACATGTCT-------------AAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 27 C 0
s Cercocebus_atys.KQ010504.1                                138736 81 -   4669795 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCCCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42476 81 +     47900 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCCCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42309 81 -     44860 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCCCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42292 81 -    148725 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCCCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25390 81 -     40656 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------G-----------------TCTACTCA--CACATCTCT-------------AAT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5359 81 +     20796 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------G-----------------TCTACTCA--CACATCTCT-------------AAT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9549 81 -     17524 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CACATCTCT-------------AAT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25271 81 -     34525 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------G-----------------TCTACTCA--CACATCTCT-------------AAT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                            9980 81 -     25376 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------G-----------------TCTACTCA--CACATCTCT-------------AAT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362575 81 -  39242232 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------G-----------------TCTACTCA--CACATCTCT-------------AAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268287 81 +  21565898 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGATC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------G-----------------TCTACTCA--CACATCTCT-------------AAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29748 81 -     45857 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGATC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CACATCTCT-------------AAT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25564 81 -     32606 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------G-----------------TCTACTCA--CACATCTCT-------------AAT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1721 81 +      8499 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------G-----------------TCTACTCA--CACATCTCT-------------AAT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23240 81 +     70610 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGATC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CACATCTCT-------------AAT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20165 81 +     36323 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CACATCTCT-------------AAT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10868 81 -     19938 GAGAGA-------T--G-------CTG-C--TTTTACA-A-CTA--TGGTC-A--CAC-----T--------A---TA-A-T-ATAGGAA-TGTCATT-----TACTA---------------GG---A-------C-----------------TCTAGTCA--CATATCTGT-------------AAT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28700 85 -     33796 GAGAAA-------T--G-------CTG-T--TCATGCC-A-CTG--TGGCC-A--CGC-----CATTCA-T-A-------GT-ACTGGCA-TGTCCGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CATGGCTCT-------------AAT
i Cheirogaleus_major.k141_666340                         I 18 C 0
s Cheirogaleus_medius.k141_759766                             3230 85 -     15404 gagaaa-------t--g-------ccg-t--tcatgcc-a-cca--tGGCC-A--CGC-----CATTCA-T-A-------GT-ACTGGCA-TGTCCGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACGGCTCT-------------AAT
i Cheirogaleus_medius.k141_759766                        I 18 C 0
s Cheracebus_lucifer.k141_2312002                             7052 76 -     32913 AAGCAA-------T--G-------CTG-T--TCATTCA-G-CTC--TGGTC-A--CAG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---C-------C-----------------GCTGTTCA--CACATCTCT-------------AAT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17465 76 -     40346 AAGCAA-------T--G-------CTG-T--TCATTCA-G-CTC--TGGTC-A--CAG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---C-------C-----------------GCTGTTCA--CACATCTCT-------------AAT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17720 76 +    216457 AAGCAA-------T--G-------CTG-T--TCATTCA-G-CTC--TGGTC-A--CAG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---T-------C-----------------GCTGTTCA--CACATCTCT-------------AAT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17513 76 +     39636 AAGCAA-------T--G-------CTG-T--TCATTCA-G-CTC--TGGTC-A--CAG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---C-------C-----------------GCTGTTCA--CACATCTCT-------------AAT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1883 74 +      5346 -AGCAA-------T--G-------CTG-T--TCATTCA-G-CCC--TG-TC-A--TGG-----C--------C-----C--T----GGGA-TGTCCTT-----TCCTA---------------GT---A-------C-----------------TCGACTCA--CACTTCTCC-------------AAT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40609 76 -    112038 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---T-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6181 76 +     34062 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---T-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341062 81 +  18827391 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGATC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CACATCTCT-------------AAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7607 81 -     44032 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGATC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CACATCTCT-------------AAT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302387 81 - 135778131 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGATC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CACATCTCT-------------AAT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406822 81 -   2368649 GAGCAA-------T--G-------CCG-T--TTATTCA-G-CTC--TGGTC-A--CAC-----C--------A--TGGCCCT--CAGG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTACTCT--TGCCTCTCT-------------AAT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376698 83 - 200372422 gagcaa-------tatg-------ccg-t--ttattca-g-ctc--tggtc-a--cac-----c--------A--TGGCCCT--CAGG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTACTCT--TGCCTCTCT-------------AAT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                254 74 -     84244 ----------------g-------ccg-t--ttattca-g-ctc--tggtc-a--cac-----c--------A--TGGCCCT--CAGG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTACTCT--TGCCTCTCT-------------AAT
i Colobus_polykomos.k141_906115                          I 7 C 0
s Condylura_cristata.JH655891.1                           35805359 44 +  53390261 ---------------------------------------------------------------C--------C--------T--T-GGCA-TGTCACT-----TATTA---------------GT---A-------T-----------------TCTATTCA--CATGTCTCT-------------AAT
i Condylura_cristata.JH655891.1                          I 27 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           844 49 -      8242 ---------------------------------------------------------------CAT--AGT-A--------T--T-GGCA-TATCACT-----TAATA---------------GT---A-------C-----------------CCTAGTCA--CACATCTCT-------------AAT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 27 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40419 37 -     83289 -----------------------------------------------------------------------------------------------------------G---------------CT---A-------CAGAA--CTTAATGGT-ACATAGTCA--CACCCCTCT-------------A--
i Cricetomys_gambianus.CriGam_scaffold_14425             I 40 I 1
s Cricetulus_griseus.LT883664.1                          213112875 37 - 224834208 -----------------------------------------------------------------------------------------------------------G---------------TT---C-------GAGCA--CTTAACACT-CTATAGTCA--CACACCTCT-------------A--
i Cricetulus_griseus.LT883664.1                          I 41 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2413 34 +     87169 -------------------------------------------------------------------------------------------TGTCACC-----TAATA---------------AT---A-------C-----------------TCTAGTCA--TA--TCTCT-------------AAT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 33 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642889 36 -   1526836 GAGAGA-------T--G-------CTT-TTTTTATGCA-A-GTG--TGTTC-A--TAC-----T--------C--------------------------------------------------------------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 32
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3067 34 +     50838 GAGCAA-------T--A-------CTG-T--TTATACA-A-CCA--TGGTT-A--TAC-----C--------A--------------------------------------------------------------------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 44
s Cuniculus_paca.CunPac_flattened_line_7025                   1658 34 +     36344 GAGAGA-------T--T-------CTG-T--TTATGCA-G-CTA--TGGTT-A--TAC-----C--------A--------------------------------------------------------------------------------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 44
s Dasypus_novemcinctus.JH564415.1                          2108202 80 -   2246927 GAGAGA-------G--G-------CTG-T--TTTCAGA-A-CTA--TGGTC-A--CAC-----C--------A---TA-A-T-ATTG-AA-TGTCATT-----TAATA---------------GG---A-------C-----------------TCTAATCA--TGTATCTCT-------------AAT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290638 83 +  12879189 gagaaa-------t--g-------ctg-t--tcctgcc-a-ctc--tggtc-a--cac-----cA--CA-C-A----A---T-ACTGGCA-CAACGGT-----GAGCA---------------GT---G-------C-----------------TCTATTCA--CACAGCTCT-------------AAT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862813 49 -  20541912 ---------------------------------------------------------------TGT--A-TTA--------T--TAG-CA-TGGCTCT-----TAATA---------------GC---A-------C-----------------ACTAGTCA--CTCATCTCT-------------AAC
i Desmodus_rotundus.KZ672289.1                           I 27 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662546 54 -   1390856 ---------------------------------------------------------------A--------ATACCATTGT-ATTGGCA-TGTTGCT-----TAATA---------------GT---A-------C-----------------TCCAGTCA--CACGTGTCT-------------AAT
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 27 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137331 54 -    198055 ---------------------------------------------------------------A--------ATACCATTGT-ATTGGCA-TGTTGCT-----TCATA---------------GT---A-------C-----------------TCCAGTCA--CACATGTCT-------------AAT
i Diceros_bicornis.DicBicMic_scaffold_5955               I 27 C 0
s Dipodomys_ordii.KN672350.1                              18948474 37 -  37912305 -----------------------------------------------------------------------------------------------------------A---------------GT---A-------C-----------------T-TGGTCA--CATCTTTCCggcttattttataaaa
i Dipodomys_ordii.KN672350.1                             I 53 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3421 37 -     10735 -----------------------------------------------------------------------------------------------------------A---------------GT---A-------C-----------------T-TGGTCA--CATCTTTCTGGCTTATTTTATAAAA
i Dipodomys_stephensi.DipSte_scaffold_89095              I 53 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96533 34 -    115145 GAGAGA-------T--G-------CTG-T--TTATGCA-A-CTA--TGGTT-A--TAC-----C--------A--------------------------------------------------------------------------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 44
s Dolichotis_patagonum.DolPat_scaffold_80628                  7979 34 +     14636 GAGAGG-------T--G-------CTG-T--CTTTGCA-A-CTA--TTTCT-G--TAA-----C--------A--------------------------------------------------------------------------------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 44
s Echinops_telfairi.JH980293.1                            62851986 81 - 111700974 GAGACA-------T--C-------CTG-T--TTATGCA-A-TTA--GGATT-A--TGC-----C--------C--TGGCA-T--T-GG-ACTATCATT-----TCATA---------------GT---A-------T-----------------GCTAATCA--CACATCTCT-------------AGG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4379 49 +     19438 ---------------------------------------------------------------caT--AGT-A--------T--TAG-CA-TATCACT-----TAATA---------------GT---A-------C-----------------TCTAGTCA--CACATCTTT-------------AAT
i Eidolon_helvum.AWHC01266696.1                          I 27 C 0
s Elephantulus_edwardii.JH947257.1                         9105515 88 -  10337057 AAGAGAGTTGACCT--T-------GTC-T--TTCTACA-T-TTA--GGACC-A--TAT-----A--------G----A-ATT-ATTGGTC-TGTTATT-----TAACA---------------GT---A-------T-----------------TATAATTA--TACATCTCT-------------AAT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29185 37 +    110024 -----------------------------------------------------------------------------------------------------------G---------------CT---A-------TAGAA--CTTAATAGT-TCATAGTCA--TGCACCTCT-------------A--
i Ellobius_lutescens.LOEQ01008920.1                      I 418 I 1
s Ellobius_talpinus.LOJH01026522.1                           11161 37 +     18970 -----------------------------------------------------------------------------------------------------------G---------------CT---A-------TAGAA--CTTAATAGT-TCATAGTCA--TGCACCTCT-------------A--
i Ellobius_talpinus.LOJH01026522.1                       I 417 I 1
s Enhydra_lutris.KZ291758.1                               24914029 54 +  41312741 ---------------------------------------------------------------c--------ataccATGGT-ATAGGCA-TGTCACC-----TAATA---------------GT---A-------C-----------------CAAAGTCA--CACATCTCT-------------CAT
i Enhydra_lutris.KZ291758.1                              I 27 C 0
s Eptesicus_fuscus.JH977646.1                             12576447 49 +  14770903 ---------------------------------------------------------------caT--A-TTA--------T--T-GGCA-TGGCACT-----TAATA---------------GT---A-------C-----------------TCTAGTCA--CACATCTCT-------------AAT
i Eptesicus_fuscus.JH977646.1                            I 27 C 0
s Equus_asinus.JREZ01000139.1                              3039529 57 -   4378816 ---------------------------------------------------------------c--------ataccATTGT-GTTGGCA-TGTCACT-----TAGTA---------------GTCACA-------C-----------------CCTAGTCA--CACATCTCT-------------AAC
i Equus_asinus.JREZ01000139.1                            I 27 C 0
s Equus_caballus.CM000403.2                               21373463 57 +  39960074 ---------------------------------------------------------------c--------ataccATTGT-GTTGGCA-TGTCACT-----TAGTA---------------GTCACA-------C-----------------CCTAGTCA--CACATCTCT-------------AAC
i Equus_caballus.CM000403.2                              I 27 C 0
s Equus_przewalskii.KK951119.1                              410249 57 -    498745 ---------------------------------------------------------------c--------ataccATTGT-GTTGGCA-TGTCACT-----TAGTA---------------GTCACA-------C-----------------CCTAGTCA--CACATCTCT-------------AAC
i Equus_przewalskii.KK951119.1                           I 27 C 0
s Erythrocebus_patas.Contig38                               260585 81 +  21539334 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGATC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CACATCTCT-------------AAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12808 85 -     24895 GAGAAA-------T--G-------CTG-T--TGATGCC-A-CTC--CAGTC-A--TAC-----CATACA-T-A-------GT-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATGCA--CACGTCTCT-------------AAT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40520 85 -     70999 GAGAAA-------T--A-------CTG-T--TCATGCC-A-CTC--CAGTC-A--TAC-----CATACA-T-A-------GT-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACGTCTCT-------------AAT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84479 85 +    112731 GAGAAA-------T--G-------CTG-T--TCATGCC-A-CTC--CAGTC-A--TAC-----CATACA-T-A-------GT-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACGTCTCT-------------AAT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41052 85 +     68309 GAGAAA-------T--G-------CTG-T--TCATACC-A-CTC--CAGTC-A--TAC-----CATACA-T-A-------GT-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATTTA--CACGTCTCT-------------AAT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51377 85 -     65740 GAGAAA-------T--G-------CTG-T--TCATGCC-A-CTC--CAGTC-A--TAC-----CATACA-T-A-------GT-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACGTCTCT-------------AAT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22007 85 -     75513 GAGAAA-------T--G-------CTG-T--TCATACC-A-CTC--CAGTC-A--TAC-----CATACA-T-A-------GT-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACGTCTCT-------------AAT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46200 85 -     97555 GAGAAA-------T--G-------CTG-T--TCATGCC-A-CTC--CAGTC-A--TAC-----CATACA-T-A-------GT-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACGTCTCT-------------AAT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            2927 85 +     30972 GAGAAA-------T--G-------CTG-T--TCATGTC-A-CTC--CAGTC-A--TAC-----CATACA-T-A-------GT-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACGTCTCT-------------AAT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40650 85 -     52037 GAGAAA-------T--A-------CTG-T--TCATGCC-A-CTC--CAGTC-A--TAC-----CATACA-T-A-------GT-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACGTCTCT-------------AAT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57051 85 -    111500 GAGAAA-------T--G-------CTG-T--TGATGCC-A-CTC--CAGTC-A--TAC-----CATACA-T-A-------GT-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATGCA--CACGTCTCT-------------AAT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244838 59 - 206538554 ---------------------------------------------------------------c--------ataccACAGT-ATTGGCA-TGTCACC-----TAATA---------------GT---AGTCACATC-----------------TCTAGTCA--CA--TCTCT-------------AAT
i Felis_catus.CM001381.2                                 I 27 C 0
s Felis_catus_fca126.CM031415.1                          185114624 59 - 205367284 ---------------------------------------------------------------c--------ataccACAGT-ATTGGCA-TGTCACC-----TAATA---------------GT---AGTCACATC-----------------TCTAGTCA--CA--TCTCT-------------AAT
i Felis_catus_fca126.CM031415.1                          I 27 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25728 59 -     30238 ---------------------------------------------------------------c--------ataccACAGT-ATTGGCA-TGTCACC-----TAATA---------------GT---AGTCACATC-----------------TCTAGTCA--CA--TCTCT-------------AAT
i Felis_nigripes.FelNig_flattened_line_31944             I 27 C 0
s Galago_moholi.ctg3793                                     122675 77 -    137831 acgaaa-------t--a-------ctg-T--TGGGCC--C-TTC--TGGTC-G--TCA-----T--------A-------GT-GTGGGTG-CATTGGT-----GACCA---------------AC---A-------C-----------------TCTTTTCA--TACTGTT-T-------------CAG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6215 77 +     22493 acgaaa-------t--a-------ctg-T--TGGGCC--C-TTC--TGGTC-A--TTG-----T--------A-------GT-GTGGGTG-CATTGGT-----GACCA---------------AC---A-------C-----------------TCTTTTCA--TACTGTT-T-------------CAG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18268 76 -     32986 acgaaa-------t--a-------ctg-T--TGGGCC--C-TTC--TGGTC-A--TCG-----T--------A-------GT-GTGGGTG-CGTTGGT-----GACCA---------------AC---A-------C------------------CCTTTCA--CACTGTT-T-------------CAG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               4977 81 +      5976 GAGAGA-------T--G-------CTG-T--TTATACA-T-CTA--AGGTC-A--TAC-----C--------A---TA--GT-ATTGGCA-TGTCACT-----TGAGA---------------GT---G-------C-----------------TCTATTCA--CATGTCTCT-------------AAG
i Galeopterus_variegatus.GalVar_scaffold_132127          I 122 I 241
s Glis_glis.GliGli_scaffold_33859                            32010 34 -     36801 GACAGA-------T--G-------CTA-T--TCATGCA-A-TTA--TGGGC-A--TAC-----C--------A--------------------------------------------------------------------------------------------------------------------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 35
s Gorilla_beringei.k141_668773                                 452 70 -      1303 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--TAC-----C--------A------------------TGTCCCC-----TGATT---------------GT---A-------T-----------------TTTATTCA--TGCATCTCT-------------AAT
i Gorilla_beringei.k141_668773                           I 87 I 285
s Gorilla_gorilla.LT578341.1                                252510 70 - 186649187 gagcaa-------t--g-------ctg-t--ttattca-a-ctc--tggtc-a--tac-----c--------a------------------tgtcccC-----TGATT---------------GT---A-------T-----------------TTTATTCA--TGCATCTCT-------------AAT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11329 34 +     11903 GACAGA-------T--G-------CTG-T--TCACGCA-A-CTA--TGAAC-A--TAC-----C--------A--------------------------------------------------------------------------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 I 35
s Hapalemur_alaotrensis.k141_330369                          12736 84 -     40692 gagaaa-------t--g-------ctg-t--tcatgcc-g-ctc--tggtc-a--tac-----cATACA-T-A-------GT-ATTGGCA-CGTCAGT-----G-AGA---------------GC---A-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34137 84 +     49394 gagaaa-------t--g-------ctg-t--tcatgcc-g-ctc--tggtc-a--tac-----cATACA-T-A-------GT-ATTGGCA-CGTCAGT-----G-AGA---------------GC---A-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59006 84 -     66874 gagaaa-------t--g-------ctg-t--tcatgcc-g-ctc--tggtc-a--tac-----cATACA-T-A-------GT-ATTGGCA-CGTCAGT-----G-AGA---------------GC---A-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7879 84 -     42923 gagaaa-------t--g-------ctg-t--tcatgcc-g-ctc--tggtc-a--tac-----cATACA-T-A-------GT-ATTGGCA-CGTCAGT-----G-AGA---------------GC---A-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14879 84 -     53142 gagaaa-------t--g-------ctg-t--tcatgcc-g-ctc--tggtc-a--tac-----cATACA-T-A-------GT-ATTGGCA-CGTCAGT-----G-AGA---------------GC---A-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28880 52 -    327341 ---------------------------------------------------------------C--------CTACCACAGT-ATTGGCA-TGTCACC-----TAATT---------------AT---A-------C-----------------TCTAGTCA--CA--TCTCT-------------AAT
i Helogale_parvula.HelPar_flattened_line_2585            I 27 C 0
s Heterocephalus_glaber.JH602082.1                         1925122 34 -  22651954 gagaga-------t--g-------ctg-t--ttatgca-a-cta--tggtt-a--tac-----c--------A--------------------------------------------------------------------------------------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 49
s Hipposideros_armiger.JXIK01000431.1                      1548298 49 -   1711038 ---------------------------------------------------------------CA--CAGT-A--------T--T-GGCA-TATCACT-----TAATA---------------GT---G-------C-----------------TCTAGTCA--TACATCTCT-------------AAT
i Hipposideros_armiger.JXIK01000431.1                    I 27 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47614 49 +     49977 ---------------------------------------------------------------CAT--AGT-A--------T--T-GTCA-TATCACT-----TAATA---------------GT---A-------C-----------------TCTAATCA--TACATCTCT-------------AAT
i Hipposideros_galeritus.HipGal_scaffold_23202           I 27 C 0
s Hoolock_leuconedys.ctg274                                    140503 70 -    630532 GAGCAA-------T--G-------CTG-G--TTATTCA-A-CTC--TGGTC-A--TAC-----C--------A------------------TGTCCCA-----TGATT---------------GT---A-------C-----------------TCTATTCA--CACATCTCC-------------AAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67325 52 +     83186 ---------------------------------------------------------------C--------ATACCATAGT-ATTGGCA-TGCTACT-----TAATA---------------AT---A-------C-----------------TCTGGTCA--CA--TCTCT-------------AAT
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 27 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69465 25 +    143317 -----------------------------------------------------------------------------------------------------------A---------------GT---A-------T-----------------TCTAGTCT--CATATCACT-------------AAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 19 C 0
s Hylobates_agilis.k141_1155965                               3538 70 +     12352 GAGCAA-------T--G-------CTG-G--TTATTCA-A-CTC--TGGTC-A--TAC-----C--------A------------------TGTCCCG-----TGATT---------------GT---A-------C-----------------TCTATTCA--CACATCTCC-------------AAT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10721 70 +     55766 GAGCAA-------T--G-------CTG-G--TTATTCA-A-CTC--TGGTC-A--TAC-----C--------A------------------TGTCCCG-----TGATT---------------GT---A-------C-----------------TCTATTCA--CACATCTCC-------------AAT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050317 70 + 191637585 GAGCAA-------T--G-------CTG-G--TTATTCA-A-CTC--TGGTC-A--TAC-----C--------A------------------TGTCCCG-----TGACT---------------GT---A-------C-----------------TCTATTCA--CACATCTCC-------------AAT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799195 70 +  11177569 GAGCAA-------T--G-------CTG-G--TTATTCA-A-CTC--TGGTC-A--TAC-----C--------A------------------TGTCCCG-----TGACT---------------GT---A-------C-----------------TCTATTCA--CACATCTCC-------------AAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384886 40 +   7955117 -----------------------------------------------------------------------------------------------------------A---------------GT---G-------TGTCA--CTTAACAGTGCTGTGGTCA--CACATCTTT-------------AAT
i Ictidomys_tridecemlineatus.JH393364.1                  I 41 C 0
s Indri_indri.k141_2415743                                     391 85 +     11955 GAGAAA-------T--G-------CTG-T--TCATGCC-A-CTC--TGGTC-A--CAC-----CATACA-T-A-------GT-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACAGCTCT-------------AAT
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237310 24 +   9596543 ---------------------------------------------------------------------------------------------------------------------------GC---A-------G-----------------TCTAGTGA--TACATCTCT-------------AAT
i Jaculus_jaculus.JH725527.1                             I 47 C 0
s Lagothrix_lagothricha.k141_246028                          41321 76 +    110728 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCGT-----TCACT---------------GT---A-------C-----------------AGTATTCA--CACATCTCT-------------AAT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59922 49 -     65777 ---------------------------------------------------------------caT--A-TTA--------T--T-GGCA-TGGCTCT-----TAATG---------------GT---A-------C-----------------TCTGGTCA--CACATCTCT-------------AAT
i Lasiurus_borealis.LasBor_scaffold_16567                I 27 C 0
s Lemur_catta.scaffold_24                                 14757527 84 +  30322482 GAGAAA-------T--G-------CTG-T--TAATGCC-G-CTC--CGGTC-A--TAC-----CATACA-T-A-------GT-ATTGGCA-CGTCAGT-----G-AGA---------------GC---A-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        1988 74 -     13097 -AGCAA-------T--G-------CTG-T--TCATTCA-A-CGC--TG-TC-A--TGG-----C--------A-----C--T----GGGA-TGTCCTT-----TCCGT---------------GT---A-------C-----------------TCCATTCA--CACGTCTCC-------------AAT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           1939 74 +      5940 -AGCAA-------T--G-------CTG-T--TCATTCA-A-CGC--TG-TC-A--TGG-----C--------A-----C--T----GGGA-TGTCCTT-----TCCGT---------------GT---A-------C-----------------TCCATTCG--CACGTCTCC-------------AAT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1573 74 -      5717 -AGCAA-------T--G-------CTG-T--TCATTCA-A-CGC--TG-TC-A--TGG-----C--------A-----C--T----GGGA-TGTCCTT-----TCCTT---------------GT---A-------C-----------------TCGATTCA--CACGTCTCC-------------AAT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8187 76 -     11567 AAGCAA-------T--G-------CTG-T--TCATTCA-T-CTC--TGGTC-G--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCCTT---------------GT---A-------C-----------------TCGATTCA--CACATCTCT-------------AAT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9568 76 -     12945 AAGCAA-------T--G-------CTG-T--TCATTCA-T-CTC--TGGTC-G--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCCTT---------------GT---A-------C-----------------TGGATTCA--CACATCTCT-------------AAT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7050 90 +     29618 GAGAAA-------T--G-------CTG-T--TCATGCC-A-CTG--TGGTC-A--TAC-----CATACA-T-A-------GT-ACTGGCT-TGTCAGTACTATGAAGA---------------GC---A-------C-----------------TGTATTCA--CACAGCTCT-------------AAT
i Lepilemur_ankaranensis.k141_567626                     I 12 C 0
s Lepilemur_dorsalis.k141_387009                              7047 90 +     31569 GAGAAA-------T--G-------CTG-T--TCATGCC-A-CTG--TGGTC-A--TAC-----CATACA-T-A-------GT-ACTGGCT-TGTCAGTACTATGAAGA---------------GC---A-------C-----------------TGTATTCA--CACAGCTCT-------------AAT
i Lepilemur_dorsalis.k141_387009                         I 12 C 0
s Lepilemur_ruficaudatus.k141_330196                          7057 90 +     24756 gagaaa-------t--g-------ctg-t--tcatgcc-a-ctg--tggtc-a--tac-----cATACA-T-A-------GT-ACTGGCT-TGTCAGTACTATGAAGA---------------GC---A-------C-----------------TGTATTCA--CACAGCTCT-------------AAT
i Lepilemur_ruficaudatus.k141_330196                     I 12 C 0
s Lepilemur_septentrionalis.k141_360456                       7051 95 +     16388 GAGAAA-------T--G-------CTG-T--TCATGCC-A-CTG--TGGTC-A--TACCATACCATACA-T-A-------GT-ACTGGCT-TGTCAGTACTATGAAGA---------------GC---A-------C-----------------TGTATTCA--CACAGCTCT-------------AAT
i Lepilemur_septentrionalis.k141_360456                  I 12 C 0
s Leptonychotes_weddellii.KB714746.1                        811378 54 -   3914936 ---------------------------------------------------------------c--------ataccATGGT-AATGACA-TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTCA--CATATCTCT-------------AAT
i Leptonychotes_weddellii.KB714746.1                     I 27 C 0
s Lepus_americanus.LepAme_scaffold_56121                     15964 79 +     24238 GAGAAT-------T--G-------CTA-T--TTGTGCA-G-CTG--TAGCT-T--TAT-----C--------A-----GGGT-ATTGACA-TGTCACT-----TTAGA---------------GG---A-------C-----------------TC--ATCA--CACACCTCT-------------AAT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330689 81 -   1826925 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCCCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8429 77 +     19643 GAGAAA-------T--A-------CTG-T--TTGGCC--C-TTC--TGGTC-A--TAG-----T--------A-------GT-GTTGGCA-CATTGGT-----GACAA---------------AC---A-------T-----------------ACTTTTCA--CACCCTG-T-------------CAG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042090 77 -   6120653 GAGAAA-------T--A-------CTG-T--TTGGCC--C-TTC--TGGTC-A--TAG-----T--------A-------GT-GTTGGCA-CATTGGT-----GACAA---------------AC---A-------T-----------------ACTTTTCA--CACCCTG-T-------------CAG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078330 82 +  43346337 GTGAGA-------T--C-------CTGGG--TTATGTA-A-CTG--TGGTC-A--TTC-----C--------A-----CAGT-CTTGGCC-TGTCATT-----GAATA---------------CT---A-------T-----------------TCTAATCA--CGCACATTT-------------AAT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41612768 35 +  59628241 -------------------------------------------------------------------------------------------TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTC---CACATCTCT-------------AAT
i Lycaon_pictus.CM007581.1                               I 31 C 0
s Macaca_arctoides.k141_1757516                              43006 81 -     61512 GAGCAA-------T--G-------CTG-T--TTACTCA-A-CTC--TGGTC-A--CAC-----C--------A--TGAC--T-CT-GAGG-TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370667 81 -  60120075 GAGCAA-------T--G-------CTG-T--TTACTCA-A-CTC--TGGTC-A--CAC-----C--------A--TGAC--T-CT-GAGG-TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                22922 81 +     30207 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------A--TGAC--T-CT-GAGG-TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20025 81 -     24934 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------A--TGAC--T-CT-GAGG-TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22874 81 +     30527 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------A--TGAC--T-CT-GAGG-TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34064 81 -     50087 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------A--TGAC--T-CT-GAGG-TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43835 80 +     51645 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------A--TGAC--T-CT-GAGG-TGT-CCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413003 81 - 187317192 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------A--TGAC--T-CT-GAGG-TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397226 81 +  25927173 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------A--TGAC--T-CT-GAGG-TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46390 81 -     62418 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------A--TGAC--T-CT-GAGG-TGTCCCC-----TCATT---------------GT---A-------C-----------------TCCACTCA--CGCATCTCT-------------AAT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23045 81 +     24253 GAGCAA-------T--G-------CTG-T--TTACTCA-A-CTC--TGGTC-A--CAC-----C--------A--TGAC--T-CT-GAGG-TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42866 81 +     59329 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------A--TGAC--T-CT-GAGG-TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268799 58 +    668171 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------A--TGAC--T-CT-GAGG-TGTCCCC-----TCATT---------------G-----------------------------------------------------------------
i Macaca_silenus.Contig273                               C 0 I 18
s Macaca_thibetana.k99_41370                                 19980 81 +     21031 GAGCAA-------T--G-------CTG-T--TTACTCA-A-CTC--TGGTC-A--CAC-----C--------A--TGAC--T-CT-GAGG-TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  577 81 +     17132 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------A--TGAC--T-CT-GAGG-TGTCCTC-----TCATT---------------GT---A-------C-----------------TCCACTCA--CGCATCTCT-------------AAT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221344 28 -    270270 ---------------------------------------------------------------caT--AGT-A--------T--TAG-CA-TATCACT-----TAATA---------------GT---A------------------------------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 27 I 20
s Mandrillus_leucophaeus.scaffold280                        320077 81 +  24302211 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCCCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354909 81 -    752769 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCCCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--CGCATCTCT-------------AAT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671634 54 -    737560 ---------------------------------------------------------------c--------ataccACAGT-GTAGGCG-TGTCACT-----TAACA---------------AT---A-------C-----------------TCTAGTCA--CATATTTCT-------------AAT
i Manis_javanica.JSZB01003497.1                          I 27 C 0
s Manis_pentadactyla.KN006162.1                             218924 54 +    317179 ---------------------------------------------------------------C--------ATACCACAGT-GTAGGCG-TGTCACT-----TAACA---------------AT---A-------C-----------------TCTAGTCA--CATATTTCT-------------AAT
i Manis_pentadactyla.KN006162.1                          I 24 C 0
s Marmota_marmota.CZRN01000018.1                           7499096 40 +  40650429 -----------------------------------------------------------------------------------------------------------A---------------GT---G-------TGTCA--CTTAACAGTGCTCTGGTCA--CACATCCCT-------------AAT
i Marmota_marmota.CZRN01000018.1                         I 41 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148543 49 +    207569 ---------------------------------------------------------------TAT--AGT-A----TC-G-----G-CA-TGTAACT-----TAATA---------------GT---A-------C-----------------TCTAGTCA--CACATCTCT-------------AAT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 26 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23898 54 -     74585 ---------------------------------------------------------------c--------aTTCCATGGT-ATTGGCA-TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTCA--CACATCTCT-------------CAT
i Mellivora_capensis.MelCap_flattened_line_19308         I 27 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46787 38 -    140813 -----------------------------------------------------------------------------------------------------------G---------------CT---A-------TAAAAAACTTA-TAGT-ACATAGTTA--CACACACCT-------------A--
i Meriones_unguiculatus.MerUng_scaffold_7390             I 48 I 1
s Mesocricetus_auratus.KB708134.1                         17427435 37 +  29670104 -----------------------------------------------------------------------------------------------------------G---------------TT---A-------AAGAA--TTTAACAGT-ACATAGTCA--CACACCTCT-------------A--
i Mesocricetus_auratus.KB708134.1                        I 41 I 1
s Mico_argentatus.k141_582562                                 7950 75 +     17804 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCCTT---------------GT---A-------C-----------------T-GATTCA--CACATCTCT-------------AAT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8734 75 -     12984 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCTT-----TCCTT---------------GT---A-------C-----------------T-GATTCA--CACATCTCT-------------AAT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16685 75 -     26561 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCCTT---------------GT---A-------C-----------------T-GATTCA--CACATCTCT-------------AAT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982668 85 +  93316391 GAGAAA-------T--G-------CTG-T--TCATGCC-A-CTG--TGGTC-A--TAC-----CATACA-T-A-------GT-ACTGGAA-TGGCAGT-----GACGA---------------GC---A-------C-----------------TCTGTTCA--TACAGCTCT-------------AAT
i Microcebus_murinus.CM007674.1                          I 18 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43072 80 +    145209 CAGACA-------T--C-------CTG-T--TTATGCA-A-TTA--GGGTC-A--TGC-----C--------A-----CA-TCATTGG-ACTGCGGTT-----TTATA----------------T---A-------T-----------------TCTAATCA--CACATCTCT-------------AGG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182761 49 +    200668 ---------------------------------------------------------------caT--A-TTA--------T--T-GGCC-TGGCACC-----TAATA---------------GT---A-------C-----------------ACTAGTCA--CTTGTTTCT-------------AAT
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 27 C 0
s Microtus_ochrogaster.CM001695.1                         15960580 37 +  27267610 -----------------------------------------------------------------------------------------------------------G---------------CT---A-------TAGAA--CTTGATAGT-TCATAGTCA--TGCACCTCT-------------A--
i Microtus_ochrogaster.CM001695.1                        I 826 I 1
s Miniopterus_natalensis.LDJU01000034.1                    6360862 49 -   8254450 ---------------------------------------------------------------caT--A-TTA--------T--T-GGTA-TGTCACT-----AAGTA---------------GT---A-------T-----------------TCTAGTCT--CACATCTCT-------------AAT
i Miniopterus_natalensis.LDJU01000034.1                  I 27 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39763 49 -     48117 ---------------------------------------------------------------CAT--A-TTA--------T--T-GGTA-TGTCACT-----AAGTA---------------GT---A-------T-----------------TCTAGTCC--CACATCTCT-------------AAT
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 27 C 0
s Miopithecus_ogouensis.k141_1534655                         20104 81 -     27822 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCGTT---------------GT---A-------C-----------------TCTACTCA--CACATCTCT-------------AAT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6385 54 +     27589 ---------------------------------------------------------------c--------ataccACGGT-AATGACA-TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTCA--CATATCTCT-------------AAT
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 27 C 0
s Mirza_zaza.k141_766280                                     50459 85 -     62432 gagaaa-------t--g-------ctg-t--tcatgcc-a-ctg--tggtc-g--tac-----cATACA-T-A-------GT-ACTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTGTTCA--CACAGCTCT-------------CAT
i Mirza_zaza.k141_766280                                 I 18 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176944 49 +    366855 ---------------------------------------------------------------CAT--A-TTA--------T--T-GGCA-TATCAGT-----TAATA---------------GT---A-------C-----------------ATTAGTCA--CTCATCTCT-------------AAC
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 27 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16642 31 -     63510 ---------------------------------------------------------------C--------CTACCACAGT-ATTGGCA-TGTCACC-----TAATT---------------A-----------------------------------------------------------------
i Mungos_mungo.MunMun_flattened_line_18455               I 27 I 13
s Murina_feae.MurFea_scaffold_17764                          36791 49 +     47283 ---------------------------------------------------------------CAT--A-TTA--------T--T-GGCA-TGGCGCT-----TAATA---------------GT---A-------T-----------------TCTATTAA--CACATCTCT-------------AAT
i Murina_feae.MurFea_scaffold_17764                      I 27 C 0
s Mus_caroli.FMAL02030609.1                                   4863 37 +      5579 -----------------------------------------------------------------------------------------------------------G---------------CT---A-------TAGAA--CTTAATAGT-ACATAATTA--CTCACTGTT-------------A--
i Mus_caroli.FMAL02030609.1                              I 40 I 1
s Mus_musculus.chr8                                       41685566 37 + 129401213 -----------------------------------------------------------------------------------------------------------G---------------CT---A-------TAGAA--CTTAATAGT-ACATAATTA--CTCACTGTT-------------A--
i Mus_musculus.chr8                                      I 40 I 1
s Mus_pahari.LT608297.1                                   58215759 17 +  89631738 -----------------------------------------------------------------------------------------------------------------------------------------------------------atatgca--ctcactgat-------------a--
i Mus_pahari.LT608297.1                                  I 5 I 2
s Mus_spretus.CM004101.1                                  39494884 37 + 130317789 -----------------------------------------------------------------------------------------------------------G---------------CT---A-------TAGAA--CTTAATAGT-AGATAATTA--CTCACTGTT-------------A--
i Mus_spretus.CM004101.1                                 I 40 I 1
s Muscardinus_avellanarius.MusAve_scaffold_12866             80610 34 -     86153 GGCAGA-------T--G-------CTG-T--TCATAAA-A-CTA--TGGGT-A--TGC-----C--------A--------------------------------------------------------------------------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 35
s Mustela_putorius.JH418006.1                             14352842 54 +  14710649 ---------------------------------------------------------------c--------ataccATGGT-ATTGGCA-TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTCA--CATATCTCT-------------CAT
i Mustela_putorius.JH418006.1                            I 27 C 0
s Myotis_brandtii.KE162005.1                               9790836 49 +  10118263 ---------------------------------------------------------------caT--A-TTA--------T--T-GGCA-TGGCGCT-----TAATA---------------GT---A-------C-----------------TCTAGTCA--CACATCTCT-------------AAT
i Myotis_brandtii.KE162005.1                             I 27 C 0
s Myotis_davidii.KB100139.1                                4385198 49 +   6019432 ---------------------------------------------------------------caT--A-TTA--------T--T-GGCA-TGACGCT-----TAATA---------------GT---A-------C-----------------TCTAGTCA--CACATCTCT-------------AAT
i Myotis_davidii.KB100139.1                              I 27 C 0
s Myotis_lucifugus.GL429869.1                               381018 49 +   4330536 ---------------------------------------------------------------caT--A-TTA--------T--T-GGCA-TGGCGCT-----TAATA---------------GT---A-------C-----------------TCTAGTCA--CACATCTCT-------------AAT
i Myotis_lucifugus.GL429869.1                            I 27 C 0
s Myotis_myotis.MyoMyo_scaffold_423922                         568 49 +       920 ---------------------------------------------------------------caT--A-TTA--------T--T-GGCA-TGGCGCT-----TAATA---------------GT---A-------C-----------------TCTAGTCA--CACATCTCT-------------AAT
i Myotis_myotis.MyoMyo_scaffold_423922                   I 155 I 98
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117646 81 +    130748 GAGCGC-------T--G-------CTA-T--TTATACA-A-CTA--TGGTC-G--TAC-----T--------A---TA-A-T-ACCGGCA-TGAAATT-----TAATA---------------AG---A-------C-----------------TCTAGTCA--CATATCTCT-------------AAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 7 C 0
s Nasalis_larvatus.k141_1350636                              26685 81 +     34575 GATCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11466986 54 -  31847680 ---------------------------------------------------------------c--------ataccATGGT-AATGACA-TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTCA--CATATCTCT-------------AAT
i Neomonachus_schauinslandi.NINY01007730.1               I 27 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125712 27 -    149072 AAGAGA-------A--G-------CTG-T--TTATGTA-A-CTA--TGGT-------------------------------------------------------------------------------------------------------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 37
s Nomascus_annamensis.k141_1771965                           51427 70 -    132029 GAGCAA-------T--G-------CTG-G--TTATTCA-A-CTC--TGGTC-A--TAC-----C--------A------------------TGTCCCG-----TGATT---------------GT---A-------C-----------------TCTATTCA--CACATCTCC-------------AAT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7522 70 -     16345 GAGCAA-------T--G-------CTG-G--TTATTCA-A-CTC--TGGTC-A--TAC-----C--------A------------------TGTCCCG-----TGATT---------------GT---A-------C-----------------TCTATTCA--CACATCTCC-------------AAT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13407 70 +     22201 GAGCAA-------T--G-------CTG-G--TTATTCA-A-CTC--TGGTC-A--TAC-----C--------A------------------TGTCCCG-----TGATT---------------GT---A-------C-----------------TCTATTCA--CACATCTCC-------------AAT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411691 70 -  22158432 GAGCAA-------T--G-------CTG-G--TTATTCA-A-CTC--TGGTC-A--TAC-----C--------A------------------TGTCCCG-----TGATT---------------GT---A-------C-----------------TCTATTCA--CACATCTCC-------------AAT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23805 70 -     54323 GAGCAA-------T--G-------CTG-G--TTATTCA-A-CTC--TGGTC-A--TAC-----C--------A------------------TGTCCCA-----TGATT---------------GT---A-------C-----------------TCTATTCA--CACATCTCC-------------AAT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196370 35 +   9404916 -------------------------------------------------------------------------------------------TGTCACC-----TAATG---------------GT---A-------C-----------------TCTAGTC---CACGTCTCT-------------AAT
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 32 C 0
s Nycticebus_bengalensis.LG01                             93634441 77 + 196305487 GAGAAA-------T--A-------CTG-T--TTGGCC--C-TTC--TGGTC-A--TGG-----T--------A-------GT-GTTGGCG-CATTGGT-----GACAA---------------AC---A-------C-----------------TCTTTTCA--CACTCTG-T-------------CAG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1199 77 -      3937 GAGAAA-------T--A-------CTG-T--TTGGCC--C-TTC--TGGTC-A--TGG-----T--------A-------GT-GTTGGCG-CATTGGT-----GACAA---------------AC---A-------C-----------------TCTTTTCA--CACTCTG-T-------------CAG
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562680 77 - 199412804 GAGAAA-------T--A-------CTG-T--TTGGCC--C-TTC--TGGTC-A--TGG-----T--------A-------GT-GTTGGCG-CATTGGT-----GACAA---------------AC---A-------C-----------------TCTTTTCA--CACTCTG-T-------------CAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549350 79 -   3988456 NNNNNN-------N--N-------NTG-T--TTATTGA-G-CTA--TAATT-T--TAC-----C--------A--GGA---T-ATTGGCA-TGCCATT-----TTAGT---------------GA---A-------C-----------------TA--ATCA--AACACCTCT-------------AAA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045575 34 -  11899542 gagCGA-------T--A-------CTG-T--TTATACA-A-CTA--TGGTT-A--TAC-----A--------G--------------------------------------------------------------------------------------------------------------------
i Octodon_degus.JH651603.1                               C 0 I 44
s Odobenus_rosmarus.KB229312.1                             1449583 54 +   2017862 ---------------------------------------------------------------t--------ataccATGGT-ATTGGCA-TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTCA--CATATCTCT-------------AAT
i Odobenus_rosmarus.KB229312.1                           I 25 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90946 37 -    140218 -----------------------------------------------------------------------------------------------------------A---------------CT---A-------TAGAA--CTTAACAGT-TCATAATCA--CACACCTCC-------------A--
i Ondatra_zibethicus.OndZib_scaffold_7387                I 424 I 1
s Onychomys_torridus.OnyTor_scaffold_2487                   105375 37 +    107918 -----------------------------------------------------------------------------------------------------------G---------------CT---A-------TAGAA--CTTAACAGT-ACATAGTCA--CACACCTCT-------------A--
i Onychomys_torridus.OnyTor_scaffold_2487                I 41 I 1
s Orycteropus_afer.OryAfe_flattened_line_171931              11437 81 -     14239 AAGAGA-------T--T-------CTG-T--TTATGCA-A-CTG--TGGTC-C--TAC-----C--------A-----CAGT-ATTGGTC-TGTCATT-----TAATA---------------GT---A-------T-----------------CCTAATCA--CATATCTTT-------------AAT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107101817 79 - 174332312 NNNNNN-------N--N-------NNN-N--NNNNNNN-N-NNN--NNNNN-N--NNN-----N--------N-----NNNN-NNNNNNN-NNNNNNN-----NNNNN---------------NN---N-------N-----------------TC--ATCA--CACATCTCT-------------AAG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37407 35 +    559221 -------------------------------------------------------------------------------------------TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTC---CACATCTCT-------------AAT
i Otocyon_megalotis.JAEUCK010005147.1                    I 32 C 0
s Otolemur_crassicaudatus.k141_649260                        37823 77 -     51505 acgaaa-------t--a-------ctg-T--TGGGCC--C-TTC--TGGTC-A--TCA-----T--------T-------GT-GTGGGTG-CGTTGGT-----GACCA---------------AC---A-------C-----------------TCTTTTCA--CACTGTT-T-------------CAG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350826 77 +   1103335 ACGAAA-------T--A-------CTG-T--TGGGCC--C-TTC--TGGTC-A--TCA-----T--------A-------GT-GTGGGTG-CGTTGGT-----GACCA---------------AC---A-------C-----------------TCTTTTCA--CACGGTT-T-------------CAG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470515 70 - 189151597 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--TAC-----C--------A------------------TGTCCCC-----TGATT---------------GT---A-------T-----------------TCTGTTCA--TGCATCTCT-------------AAT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22548 59 -    230217 ---------------------------------------------------------------c--------ataccACAGT-ATTGGCA-TGTCACC-----TAATA---------------GT---AATCACATC-----------------TCTAGTCA--CA--TCTCT-------------AAT
i Panthera_onca.PanOnc_flattened_line_3271               I 27 C 0
s Panthera_pardus.KV860321.1                              18459874 59 -  18783137 ---------------------------------------------------------------c--------ataccACAGT-ATTGGCA-TGTCACC-----TAATA---------------GT---AATCACATC-----------------TCTAGTCA--CA--TCTCT-------------AAT
i Panthera_pardus.KV860321.1                             I 27 C 0
s Panthera_tigris.KE722367.1                               3970594 59 +   8748460 ---------------------------------------------------------------c--------ataccACAGT-ATTGGCA-TGTCACC-----TAATA---------------GT---AGTCACATC-----------------TCTAGTCA--CA--TCTCT-------------AAT
i Panthera_tigris.KE722367.1                             I 27 C 0
s Papio_anubis.CM001495.2                                   240917 81 - 183742232 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCCCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCGACTCA--CGCATCTCT-------------AAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7381 81 +     21308 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCCCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCGACTCA--CGCATCTCT-------------AAT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288420 81 -  20919399 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCCCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCGACTCA--CGCATCTCT-------------AAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20036 81 -     27687 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCCCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCGACTCA--CGCATCTCT-------------AAT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13172 81 +     16796 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCCCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCGACTCA--CGCATCTCT-------------AAT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 19982 81 -     23640 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCCCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCGACTCA--CGCATCTCT-------------AAT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13198 52 +     78924 ---------------------------------------------------------------C--------ATACCATAGT-ATTGACA-TGTCACC-----TAATG---------------GT---A-------C-----------------TCTAGTCA--CA--TCTCT-------------AAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 24 C 0
s Perodicticus_ibeanus.k141_1921260                          24107 77 +     31479 AAGAAA-------T--A-------CTG-T--TGGGCC--C-TTC--TGGTC-A--TAG-----T--------A-------GT-GTTGGTG-CGTTAGT-----GACCA---------------AC---A-------C-----------------TCTTTTCA--CACTCTC-T-------------CAG
i Perodicticus_ibeanus.k141_1921260                      T 1327 C 0
s Perodicticus_potto.k141_1854441                            16466 77 -     24908 AAGAAA-------T--A-------CTG-T--TGGGCC--C-TTC--TGGTC-A--TAG-----T--------A-------GT-GTTGGTG-CGTTAGT-----GACCA---------------AC---A-------C-----------------TCTTTTCA--CACTCTC-T-------------CAG
i Perodicticus_potto.k141_1854441                        T 1337 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37671 36 +     38305 -----------------------------------------------------------------------------------------------------------A---------------GT---A-------C-----------------TGTGGTCA--CACTATTCT--GGCTTATTATAAAA
i Perognathus_longimembris.PerPac_flattened_line_28053   I 53 C 0
s Peromyscus_maniculatus.KI615324.1                         245023 37 +  18517816 -----------------------------------------------------------------------------------------------------------G---------------CT---C-------TAGAA--CTTAACAGT-ACATAGTCA--CAGACCTCT-------------A--
i Peromyscus_maniculatus.KI615324.1                      I 41 I 1
s Petromus_typicus.PetTyp_scaffold_17301                     30046 34 -     56120 GAAAGA-------T--G-------CTG-T--TTATGCA-A-CTA--TGATT-A--TAC-----C--------A--------------------------------------------------------------------------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 43
s Piliocolobus_badius.k141_2704958                             200 81 +     55023 GAGCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--TAC-----C--------A--TGGC--T-CTCAG-G-TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             201 81 +     40849 GAGCAA-------T--G-------CTG-T--TCATTCA-G-CTG--TGGTC-A--TAC-----C--------A--TGGC--T-CTCAG-G-TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  251949 81 +  14605196 GAGCAA-------T--G-------CTG-T--TCATTCA-G-CTG--TGGTC-A--TAC-----C--------A--TGGC--T-CTCAG-G-TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974              969 51 +     22231 ---------------------------------------------------------------caT-GT-T-A--------T--T-GGCA-TGGCGCT-----TAATA---------------GT---A-------C-----------------TCTAGACATACACATCTCT-------------AAT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 27 C 0
s Pithecia_albicans.k141_1239476                             62956 76 +    207309 AAGCAA-------T--G-------CTG-T--TCATTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---A-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4052 76 -     25401 AAGCGA-------T--G-------CTG-T--TCGTTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----GCATT---------------GT---A-------C-----------------TCTATTCC--CACATCTCT-------------AAT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29791 76 +     58159 AAGCAA-------T--G-------CTG-T--TCGTTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---A-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30067 76 +     63561 AAGCAA-------T--G-------CTG-T--TCGTTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---A-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29830 76 +     51148 AAGCAA-------T--G-------CTG-T--TCGTTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGAA-TGTCCCT-----TCATT---------------GT---A-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554799 76 -   4542175 AAGCGA-------T--G-------CTG-T--TCGTTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----GCATT---------------GT---A-------C-----------------TCTATTCC--CACATCTCT-------------AAT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29814 76 +     51125 AAGCAA-------T--G-------CTG-T--TCGTTCA-A-CTC--TGGTC-A--TGG-----C--------A-----C--T----GGGA-TGTCCCT-----TCATT---------------GT---A-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6222 75 +     39866 AAGCAA-------T--G-------CTG-T--TCATTCA-G-CTC--TGGTC-A--CAG-----C--------A-----C--T----GG-A-TGTCCCT-----TCATT---------------GT---C-------T-----------------GCTGTTCA--CACATCTCT-------------AAT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1307 75 -      9282 AAGCAA-------T--G-------CTG-T--TCATTCA-G-CTC--TGGTC-A--CAG-----C--------A-----C--T----GG-A-TGTCCCT-----TCATT---------------GT---C-------T-----------------GCTGTTCA--CACATCTCT-------------AAT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40711 75 -     87950 AAGCAA-------T--G-------CTG-T--TCATTTA-G-CTC--TGGTC-A--CAG-----C--------A-----C--T----GG-A-TGTCCCT-----TCATT---------------GT---C-------T-----------------GCTGTTCA--CACATCTCT-------------AAT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41104 75 -     88961 AAGCAA-------T--G-------CTG-T--TCATTCA-G-CTC--TGGTC-A--CAG-----C--------A-----C--T----GG-A-TGTCCCT-----TCATT---------------GT---C-------T-----------------GCTGTTCA--CACATCTCT-------------AAT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5803 75 -     39403 AAGCAA-------T--G-------CTG-T--TCATTCA-G-CTC--TGGTC-A--CAG-----C--------A-----C--T----GG-A-TGTCCCT-----TCATT---------------GT---C-------T-----------------GCTGTTCA--CACATCTCT-------------AAT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40755 75 +     87928 AAGCAA-------T--G-------CTG-T--TCATTCA-G-CTC--TGGTC-A--CAG-----C--------A-----C--T----GG-A-TGTCCCT-----TCATT---------------GT---C-------T-----------------GCTGTTCA--CACATCTCT-------------AAT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5800 75 -     60166 AAGCAA-------T--G-------CTG-T--TCATTCA-G-CTC--TGGTC-A--CAG-----C--------A-----C--T----GG-A-TGTCCCT-----TCATT---------------GT---C-------T-----------------GCTGTTCA--CACATCTCT-------------AAT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12736 75 -     67232 AAGCAA-------T--G-------CTG-T--TCATTCA-G-CTC--TGGTC-A--CAG-----C--------A-----C--T----GG-A-TGTCCCT-----TCATT---------------GT---C-------T-----------------GCTGTTCA--CACATCTCT-------------AAT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40652 75 -     90634 AAGCAA-------T--G-------CTG-T--TCATTCA-G-CTC--TGGTC-A--CAG-----C--------A-----C--T----GG-A-TGTCCCT-----TCATT---------------GT---C-------T-----------------GCTGTTCA--CACATCTCT-------------AAT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42120 75 +     89403 AAGCAA-------T--G-------CTG-T--TCATTCA-G-CTC--TGGTC-A--CAG-----C--------A-----C--T----GG-A-TGTCCCT-----TCATT---------------GT---C-------T-----------------GCTGTTCA--CACATCTCT-------------AAT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175655 70 - 189387572 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--TAC-----C--------A------------------TGTCCCC-----TGATT---------------GT---A-------T-----------------TCTATTCA--TGCATCTCT-------------AAT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190473 70 -   9816681 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--TAC-----C--------A------------------TGTCCCC-----TGATT---------------GT---A-------T-----------------TCTATTCA--TGCATCTCT-------------AAT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25299 81 +     69807 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------A--TGGC--T--TTGAGG-TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42494 81 -     80239 gaccaa-------t--g-------ctg-t--ttattca-g-ctg--tggtc-a--cac-----c--------A--TGGC--T--TTGAGG-TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980683 84 +   4620579 GAGAAA-------T--G-------CTG-T--TCATGCC-G-CTC--CGGTC-A--TAC-----CATACA-T-A-------GT-ATTCGCA-TGTCAGT-----G-AGA---------------GC---A-------C-----------------TCTATTCA--CACATGTCT-------------AAT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564150 85 -   2598838 GAGAAA-------T--G-------CTG-T--TCACGCC-A-CTC--TGGTC-A--CAC-----CATACG-T-A-------GT-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACAGCTCT-------------AAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1786 85 -      7103 gagaaa-------t--g-------ctg-t--tcacgcc-a-ctc--tggtc-a--cac-----cATACA-T-A-------GT-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACAGCTCT-------------AAT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2383 85 -     11706 GAGAAA-------T--G-------CTG-T--TCACGCC-A-CTC--TGGTC-A--CAC-----CATACA-C-A-------GG-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACAGCTCT-------------AAT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6119 85 -     30655 GAGAAA-------T--G-------CTG-T--TCACGCC-A-CTC--TGGTC-A--CAC-----CATACA-C-A--GGAC--T----GGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACAGCTCT-------------AAT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32444 85 +     46564 GAGAAA-------T--G-------CTG-T--TCACGCC-A-CTC--TGGTC-A--CAC-----CATACA-C-A-------GG-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACAGCTCT-------------AAT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92715 85 -     98465 GAGAAA-------T--G-------CTG-T--TCACGCC-A-CTC--TGGTC-A--CAC-----CATACA-T-A-------GT-ATTGTCA-TGTCAAT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACAGCTCT-------------AAT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6352 85 +     35169 gagaaa-------t--g-------ctg-t--tcacgcc-a-ctc--tggtc-a--cac-----cATACA-T-A-------GT-ATTGGCA-TGTCAGT-----GAAGA---------------GC---A-------C-----------------TCTATTCA--CACAGCTCT-------------ACT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34331 38 +     52041 -----------------------------------------------------------------------------------------------------------G---------------CT---A-------TAAAAAACT-AATAGT-ACATAGTTA--CACACACCT-------------A--
i Psammomys_obesus.NESX01036366.1                        I 40 I 1
s Pteronotus_parnellii.KE847780.1                            50003 49 -     66298 ---------------------------------------------------------------CAT--A-TTA--------T--T-GGCA-TGTCACT-----TAATA---------------GT---A-------C-----------------GCTAGTTA--CTTATCTCT-------------AAC
i Pteronotus_parnellii.KE847780.1                        I 27 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2618 54 -     18639 ---------------------------------------------------------------c--------ataccATGGT-ATTGGCA-TGTCACC-----TAATA---------------GT---A-------C-----------------TCCAGTCA--CACATCTCT-------------CAT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 27 C 0
s Pteropus_alecto.KB030862.1                               5838972 49 -  28871421 ---------------------------------------------------------------caT--AGT-A--------T--TAG-CA-TATCACT-----TAATA---------------GT---A-------C-----------------TCTGGTCA--CACATCTCT-------------AAT
i Pteropus_alecto.KB030862.1                             I 27 C 0
s Pteropus_vampyrus.KN525825.1                             3535538 49 -   4952924 ---------------------------------------------------------------caT--AGT-A--------T--TAG-CA-TATCACT-----TAATA---------------GT---A-------C-----------------TCTGGTCA--CACATCTCT-------------AAT
i Pteropus_vampyrus.KN525825.1                           I 27 C 0
s Puma_concolor.QAVW01001104.1                            18097191 59 +  38429054 ---------------------------------------------------------------c--------ataccACAGT-ATTGGCA-TGTCACC-----TAATA---------------GT---AGTCACATC-----------------TCTAGTCA--CA--TCTCT-------------AAT
i Puma_concolor.QAVW01001104.1                           I 27 C 0
s Pygathrix_cinerea.k141_1153803                             24709 81 +     91421 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151202 81 -   7812017 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5579 81 +     72585 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CACATCTCT-------------AAT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020777 37 -  90668790 -----------------------------------------------------------------------------------------------------------G---------------CT---A-------TAGAA--CTTAACAGT-ACATAGTCA--TACAGTGTT-------------A--
i Rattus_norvegicus.chr16                                I 40 I 1
s Rhinolophus_sinicus.LVEH01000134.1                       2911637 49 +   3329780 ---------------------------------------------------------------CAT--AGT-A--------T--T-GGCG-TATCACT-----TAACA---------------GT---A-------C-----------------TCTAGTCA--TACATATCT-------------TAT
i Rhinolophus_sinicus.LVEH01000134.1                     I 27 C 0
s Rhinopithecus_bieti.k119_221883                            26519 81 +     27361 gaccaa-------t--g-------ctg-t--ttattca-g-ctg--tggtc-a--cac-----c--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119886 81 + 195417433 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--TGCATCTCT-------------AAT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234127 81 -   7961872 gaccaa-------t--g-------ctg-t--ttattca-g-ctg--tggtc-a--cac-----c--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 72954 49 -    116970 ---------------------------------------------------------------CAT--AGT-C--------T--TAG-CA-TATTACT-----TAATA---------------GT---A-------C-----------------TCTAGTCA--CACATCTTT-------------AAT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 27 C 0
s Saguinus_bicolor.k141_1429097                               1881 74 +     27962 -AGCAA-------T--G-------CTG-T--TCATTCA-G-CCC--TG-TC-A--TGG-----C--------C-----C--T----GGGA-TGTCCTT-----TCCTA---------------GT---A-------C-----------------TCGACTCA--CACTTCTCC-------------AAT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1889 74 +      6077 -AGCAA-------T--G-------CTG-T--TCATTCA-G-CCC--TG-TC-A--TGG-----C--------C-----C--T----GGGA-TGTCCTT-----TCCTT---------------CT---A-------C-----------------TCGACTCA--CACATCTCC-------------AAT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             1926 74 +      5971 -AGCAA-------T--G-------CTG-T--TCATTCA-G-CCC--TG-TC-A--TGG-----C--------C-----C--T----GGGA-TGTCCTT-----TCCTT---------------GT---A-------C-----------------TCGACTCA--CACATCTCC-------------AAT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               1980 74 +      5932 -AGCAA-------T--G-------CTG-T--TCATTCA-G-CCC--TG-TC-A--TGG-----C--------C-----C--T----GGGA-TGTCCTT-----TCCTT---------------GT---A-------C-----------------TCGACTCA--CACATCTCC-------------AAT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               164 73 -      4390 -AGCAA-------T--G-------CTG-T--TCATTCA-G-CCC--TG-TC-A--TGG-----C--------C-----C--T----GGGA-TGTCCTT-----TCCTT---------------GT---A-------C-----------------T-GACTCA--CACATCTCC-------------AAT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389229 74 - 209938924 -AGCAA-------T--G-------CTG-T--TCATTCA-G-CCC--TG-TC-A--TGG-----C--------C-----C--T----GGGA-TGTCCTT-----TCCTA---------------GT---A-------C-----------------TCGACTCA--CACATCTCC-------------AAT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                1928 74 +      5979 -AGCAA-------T--G-------CTG-T--TCATTCA-G-CCC--TG-TC-A--TGG-----C--------C-----C--T----GGGA-TGTCCTT-----TCCTT---------------GT---A-------C-----------------TCGACTCA--CACATCTCC-------------AAT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2276 74 -      4301 -AGCAA-------T--G-------CTG-T--TCATTCA-G-CCC--TG-TC-A--TGG-----C--------C-----C--T----GGGA-TGTCCTT-----TCCTT---------------CT---A-------C-----------------TCGACTCA--CACATCTCC-------------AAT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236387 76 +   5703754 AAGCAA-------T--G-------CTG-T--TCATGCA-G-CTC--TGGTC-G--TGG-----C--------A-----C--T----GGGA-TGGCCCC-----TCATT---------------GT---C-------C-----------------TCGATTCA--CACATCTCT-------------AAT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           5977 76 +     21866 AAGCAA-------T--G-------CTG-T--TCATGCA-G-CTC--TGGTC-G--TGG-----C--------A-----C--T----GGGA-TGGCCCC-----TCATT---------------GT---C-------C-----------------TCGATTCA--CACATCTCT-------------AAT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114170 41 +    313613 ---------------------------------------------------------------T--------A--------T--T-GCCA-TGTCACT-----C---A---------------GC---A-------C-----------------TCTAGTCA--CATGTCTCT-------------AAT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 27 C 0
s Semnopithecus_entellus.k141_158471                         23026 81 +     27374 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26545 81 +     58920 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13041 81 -     45317 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20699 81 -     42441 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23379 81 -     29113 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26448 81 -     48123 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46887 34 +     77746 -----------------------------------------------------------------------------------------------------------G---------------CT---A-------CAGAA--CTTAGCAGT-ACATAGTCA--CTCACTT------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                I 41 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856436 81 -   1910179 gagaga-------t--g-------ctg-C--TAAAGCA-G-CAA--TGATC-A--TAT-----C--------A-----CAGT-TTTGGCA-TATCACT-----TCAGA---------------GT---A-------C-----------------TCCAGTCA--CACGTCTCT-------------CGT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866454 40 +   3870691 -----------------------------------------------------------------------------------------------------------A---------------GT---G-------TGTCA--CTTAACAGTGCTCTGGTCA--CACATCTCT-------------AAT
i Spermophilus_dauricus.KZ294078.1                       I 41 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4617 54 -     97271 ---------------------------------------------------------------C--------ATACTTTGGT-GTTGGCA-TGTCACC-----TAATA---------------GT---A-------C-----------------TCTTGTCA--CATATCTCT-------------CCT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 27 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123041 52 +    196729 ---------------------------------------------------------------C--------TTACCACAGT-ATTGGCA-TGTCACC-----TAATT---------------AT---A-------C-----------------TCTAGTCA--CA--TCTCT-------------AAT
i Suricata_suricatta.SurSur_flattened_line_6629          I 27 C 0
s Symphalangus_syndactylus.tarseq_199                       388964 70 +   1523678 GAGCAA-------T--G-------CTG-G--TCATTCA-A-CGC--TGGTC-A--TAC-----C--------A------------------TGTCCCG-----TGATT---------------GT---A-------C-----------------TCTATTCA--CACATTTCT-------------AAT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11779 49 +     22964 ---------------------------------------------------------------caT--A-TTA--------T--T-GGCA-TGTCACT-----TCATA---------------GT---A-------C-----------------TCTAGTCA--CACATCTCT-------------AAT
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 27 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 766 81 +      5583 GAGAGT-------T--G-------CTA-T--TTATACA-A-CTG--TGGTC-G--TAC-----T--------A---TA-A-T-CCTGTCA-TGAAATT-----TAATA---------------AG---A-------C-----------------TCTAGTCA--CATATCTCT-------------AAT
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 7 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189706 51 +    199430 ---------------------------------------------------------------C--------ATACCATTGT-ATTGGCA-TGTCACT-----TA------------------GT---A-------C-----------------TCTAGTCA--CACATCTCT-------------AAT
i Tapirus_indicus.TapInd_scaffold_7432                   I 26 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103660 51 -    539355 ---------------------------------------------------------------C--------ATACCATTGT-ATTGGCA-TGTCACT-----TA------------------GT---A-------C-----------------TCTAGTCA--CACATCTCT-------------AAT
i Tapirus_terrestris.TapTer_scaffold_755                 I 26 C 0
s Tarsius_lariang.k141_1780720                                5005 62 +      6850 GAGAAA-------T--G-------GTA-T--TTATGCA-A-CTC--TTGTC-AGCTTA-----T--------A-------GT-ATTGGCA-TGTCACA-----TAAGA---------------GT---A-------C-----------------T----------------------------------
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5046 62 +     20590 GAGAAA-------T--G-------GTA-T--TTATGCA-A-CTC--TTGTC-AGCTTA-----T--------A-------GT-ATTGGCA-TGTCACA-----TAAGA---------------GT---A-------C-----------------T----------------------------------
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350903 81 - 186847797 GAGCAA-------T--G-------CTG-T--TTATTCA-A-CTC--TGGTC-A--CAC-----C--------ATGGCCCTG--A--GG---TGTCCCC-----TCATT---------------GT---A-------C-----------------TCTACTCA--TGCATCTCT-------------AAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22375 34 -     33621 GAAGGA-------T--G-------CTG-T--TTATATA-A-CTA--TGATT-A--TAG-----C--------A--------------------------------------------------------------------------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 43
s Tolypeutes_matacus.TolMat_scaffold_31955                   17890 81 -     31044 GAGAGA-------T--G-------CTG-T--TTTCACA-A-CCA--TGGTC-A--CGC-----T--------A---TA-A-T-ACTGGAA-CGCCATG-----TAATA---------------GG---T-------C-----------------TCTAATCA--CATATCTCT-------------ATT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477822 49 -    610378 ---------------------------------------------------------------CAT--A-TTG----TC-G-----G-CA-TGGCACT-----TAACA---------------GT---A-------C-----------------ACTGGTCA--CTCATCTCT-------------GAC
i Tonatia_saurophila.TonSau_scaffold_294                 I 27 C 0
s Trachypithecus_auratus.k141_1189070                        18590 81 +     26378 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GC---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31255 80 -     78344 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGT-CCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17911 81 +     25722 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GC---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26136 81 -     62838 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26253 81 +     46913 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7061 81 -     28527 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28075 81 -     64340 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26112 81 -     63452 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7555 81 +     22490 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                          983 81 -      6147 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         7958 80 -     13050 gaccaa-------t--g-------ctg-t--ttattca-g-ctg--tggtc-a--cac-----c--------ATGGCTCTG--A--GG---TGT-CCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253197 80 -   6242583 gaccaa-------t--g-------ctg-t--ttattca-g-ctg--tggtc-a--cac-----c--------ATGGCTCTG--A--GG---TGT-CCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       58947 81 +     59866 GACCAA-------T--G-------CTG-T--TTATTCA-G-CTG--TGGTC-A--CAC-----C--------ATGGCTCTG--A--GG---TGTCCCC-----TCACT---------------GT---A-------C-----------------TCTATTCA--CGCATCTCT-------------AAT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1831978 79 -   4065304 GA--GG-------T--G-------CTG-T--TTACGCA-G-CTA--TGGTA-A--TAC-----C--------A---TA--GG-ATTGGCA-TGCCACT-----CAAGA---------------GC---A-------C-----------------TCTAATCA--CTAATTTCT-------------GAT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6258 79 -     70247 ga--ga-------t--g-------ccg-t--ttatgca-a-cta--tGGTA-A--TAC-----C--------A---TA--GT-ATTGGCA-TGCCACT-----CAAGA---------------GC---A-------C-----------------TCTAGTCA--CTAATTTCT-------------GAT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105394 44 -    105689 ---------------------------------------------------------------C--------A--------T--T-GAAA-TATCATT-----TGTTT---------------GT---A-------A-----------------TCTATTCT--CATATCTTT-------------AAT
i Uropsilus_gracilis.UroGra_scaffold_7153                I 28 C 0
s Ursus_maritimus.KK499267.1                                179967 54 +   5085361 ---------------------------------------------------------------c--------gtaccgTGGT-ATTTGCA-TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTCC--CATATCTCT-------------CAT
i Ursus_maritimus.KK499267.1                             I 27 C 0
s Varecia_rubra.k141_787544                                  23327 85 -     30710 GAGAAA-------T--A-------CTG-T--TCATGCC-A-CTC--CAGTC-A--TAC-----CATACA-T-A-------GT-ATTGGCC-TGTCAGT-----GAAGA---------------AC---A-------C-----------------TGTATTCA--CACATCTCT-------------AAT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22234 85 -    147434 GAGAAA-------T--A-------CTG-T--TCATGCC-A-CTC--CAGTC-A--TAC-----CATACA-T-A-------GT-ATTGGCA-TGTCAGT-----GAAGA---------------AC---A-------C-----------------TGTATTCA--CACATCTCT-------------AAT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103129 35 -    112863 -------------------------------------------------------------------------------------------TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTC---CACATCTCT-------------AAT
i Vulpes_lagopus.VulLag_flattened_line_12041             I 31 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172223 40 -    224448 -----------------------------------------------------------------------------------------------------------A---------------GT---G-------GGTCA--CTTAAGAGTGCTCTGGTCA--CACATATCT-------------AAT
i Xerus_inauris.XerIna_scaffold_2302                     I 40 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26783 54 -     86975 ---------------------------------------------------------------c--------ataccATGGT-ATTGGCA-TGTCACC-----TAATA---------------GT---A-------C-----------------TCTAGTCA--CATATCTCT-------------AAT
i Zalophus_californianus.ZalCal_flattened_line_17732     I 27 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1476 40 +      2695 -----------------------------------------------------------------------------------------------------------GGTTTATAACTGAACAGC---A-------G-----------------TCGAATGA--CACATCACT-------------AGT
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 48 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3232 5 +     36723 A--GAGC
s Acinonyx_jubatus.LLWD01001279.1                           810987 5 +   1699592 G--GAGC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413501 5 +  29979442 G--GAGC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213395 5 +    347723 G--GAGG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16147 5 -     61208 G--GAAT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45638 5 +     53615 A--CAGC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41578 5 +     44087 A--CAGC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14218 5 -     21945 A--CAGC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15894 5 +     32033 A--CAGC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70342 5 -     84148 C--AAGC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42575 5 -     78289 C--AAGC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42021 5 +     55831 C--AAGC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40463 5 -     64179 C--AAGC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22109 5 -     24835 C--AAGC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39092 5 +     45454 C--AAGC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44790 5 +     70886 C--AAGC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6915 5 +     30854 C--AAGC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31054 5 +     42133 C--AAGC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174838 5 -    412891 A--GGAC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48864 5 -     65372 C--AAGC
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42611 5 +     43593 C--AAGC
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670624 5 +   5030052 C--AAGC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22266 5 -     23494 C--AAGC
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7402 5 +      8415 C--AAGC
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14179 5 -     32367 G--GAAC
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 45 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3124 5 -     15198 A--GAAC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272854 5 +  21539123 C--AAGC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9021 5 +     48076 C--AAGC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4158 5 -     28759 C--AAGC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31711 5 +     44353 C--AAGC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47082 5 -     71267 C--AAGC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21141 5 -     33135 C--AAGC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4351 5 +     11645 G--GAAC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4357 5 -     19611 G--GAAC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6045 5 +     28062 C--AAGC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41339 5 -     91139 C--AAGC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18865 5 +     95584 C--AAGC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18778 5 +    119600 C--AAGC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8253 5 +     18648 C--AAGC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7915 5 -     13885 C--AAGC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16614 5 +     17162 C--AAGC
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451569 5 + 189096842 C--AAGC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17862 5 -     18408 C--AAGC
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503534 5 +  60362399 G--GAGC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7170 5 -     23171 G--GAGC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220513 5 +   9314153 G--GAGC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613648 5 +  59632846 G--GAGC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105229 5 -  63665305 G--GAGC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268375 5 +    496798 G--GAGT
i Carlito_syrichta.NW_007259797.1                        I 26 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3416 5 +      5315 a--gaaC
i Carollia_perspicillata.CarPer_scaffold_170178          I 222 C 0
s Cavia_aperea.AVPZ01000300.1                              4994111 5 +  23392119 G--GAAC
i Cavia_aperea.AVPZ01000300.1                            I 42 C 0
s Cavia_porcellus.DS562891.1                               4997553 5 +  23407841 G--GAAC
i Cavia_porcellus.DS562891.1                             I 42 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60654 5 -     66877 G--GAAC
i Cavia_tschudii.CavTsc_scaffold_23560                   I 42 C 0
s Cebuella_niveiventris.k141_592277                           3146 5 -     12580 C--AAGC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41032 5 +     53515 C--AAGC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369243 5 -  26074798 C--AAGC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6132 5 -     34880 C--AAGC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65227 5 -     89041 C--AAGC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1548 5 -      1636 G--GAGT
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490308 5 -  27778364 G--GAAC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17141 5 +     27315 G--GAAC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138817 5 -   4669795 A--CAGC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42557 5 +     47900 A--CAGC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42390 5 -     44860 A--CAGC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42373 5 -    148725 A--CAGC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25471 5 -     40656 A--CAGC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5440 5 +     20796 A--CAGC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9630 5 -     17524 A--CAGC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25352 5 -     34525 A--CAGC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10061 5 -     25376 A--CAGC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362656 5 -  39242232 A--CAGC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268368 5 +  21565898 A--CAGC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29829 5 -     45857 A--CAGC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25645 5 -     32606 A--CAGC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1802 5 +      8499 A--CAGC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23321 5 +     70610 A--CAGC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20246 5 +     36323 A--CAGC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10949 5 -     19938 G--GAAC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28785 5 -     33796 G--GAAC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3315 5 -     15404 G--GAAC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7128 5 -     32913 C--AAGC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17541 5 -     40346 C--AAGC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17796 5 +    216457 C--AAGC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17589 5 +     39636 C--AAGC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1957 5 +      5346 C--ACGC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40685 5 -    112038 C--AAGC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6257 5 +     34062 C--AAGC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341143 5 +  18827391 A--CAGC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7688 5 -     44032 A--CAGC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302468 5 - 135778131 A--CAGC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406903 5 -   2368649 A--CAGC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376781 5 - 200372422 A--CAGC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                328 5 -     84244 A--CAGC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805403 5 +  53390261 G--GAAC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           893 5 -      8242 G--GAAC
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2447 5 +     87169 G--GAGC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642957 5 -   1526836 A--AAAC
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 32 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3145 5 +     50838 G--GAGC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 44 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1736 5 +     36344 G--GAAC
i Cuniculus_paca.CunPac_flattened_line_7025              I 44 C 0
s Dasypus_novemcinctus.JH564415.1                          2108282 5 -   2246927 G--GAAT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290721 5 +  12879189 G--GAAC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862862 5 -  20541912 A--GAAC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662600 5 -   1390856 G--GAAC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137385 5 -    198055 G--GAAC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96611 5 -    115145 G--GACG
i Dinomys_branickii.DinBra_scaffold_10381                I 44 C 0
s Dipodomys_ordii.KN672350.1                              18948511 5 -  37912305 t--gatt
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3458 5 -     10735 T--GATT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8057 5 +     14636 G--GAAA
i Dolichotis_patagonum.DolPat_scaffold_80628             I 44 C 0
s Echinops_telfairi.JH980293.1                            62852067 5 - 111700974 G--ACAT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4428 5 +     19438 A--GAAC
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105603 5 -  10337057 A--AAAT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914083 5 +  41312741 G--GAGC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576496 5 +  14770903 G--GAAC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039586 5 -   4378816 G--GAAC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373520 5 +  39960074 G--GAAC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410306 5 -    498745 G--GAAC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260666 5 +  21539334 A--CAGC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12893 5 -     24895 G--GAAC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40605 5 -     70999 G--GAAC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84564 5 +    112731 G--GAAC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41137 5 +     68309 G--GAAC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51462 5 -     65740 G--GAAC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22092 5 -     75513 G--GAAC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46285 5 -     97555 G--GAAC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3012 5 +     30972 G--GAAC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40735 5 -     52037 G--GAAC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57136 5 -    111500 G--GAAC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244897 5 - 206538554 G--GAGC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114683 5 - 205367284 G--GAGC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25787 5 -     30238 G--GAGC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122752 5 -    137831 G--GAAC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6292 5 +     22493 G--GAAC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18344 5 -     32986 G--GAAC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17204 5 +     18121 A--GAGC
i Galeopterus_variegatus.GalVar_scaffold_74466           I 82 C 0
s Glis_glis.GliGli_scaffold_33859                            32079 5 -     36801 G--GAAC
i Glis_glis.GliGli_scaffold_33859                        I 35 C 0
s Gorilla_beringei.k141_3358147                               3569 5 -      8343 A--GAGC
i Gorilla_beringei.k141_3358147                          I 70 C 0
s Gorilla_gorilla.LT578341.1                                252580 5 - 186649187 A--GAGC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11398 5 +     11903 G--GAAC
i Graphiurus_murinus.GraMur_scaffold_90206               I 35 C 0
s Hapalemur_alaotrensis.k141_330369                          12820 5 -     40692 G--GAAC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34221 5 +     49394 G--GAAC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59090 5 -     66874 G--GAAC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7963 5 -     42923 G--GAAC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14963 5 -     53142 G--GAAC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28932 5 -    327341 G--GAGC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548347 5 -   1711038 G--GAAC
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47663 5 +     49977 G--GAAC
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140573 5 -    630532 A--GAGC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67377 5 +     83186 G--GAGC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 229
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69490 5 +    143317 G--GAAC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3608 5 +     12352 A--GAGC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10791 5 +     55766 A--GAGC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050387 5 + 191637585 A--GAGC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799265 5 +  11177569 A--GAGC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384926 5 +   7955117 T--GAAC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     476 5 +     11955 G--GAAC
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237334 5 +   9596543 G--GAAT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41397 5 +    110728 C--AAGC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59971 5 -     65777 G--GAAC
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757611 5 +  30322482 G--GAAC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2062 5 -     13097 C--AAGC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2013 5 +      5940 C--AAGC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1647 5 -      5717 C--AAGC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8263 5 -     11567 C--AAGC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9644 5 -     12945 C--AAGC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7140 5 +     29618 G--GAAC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7137 5 +     31569 G--GAAC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7147 5 +     24756 G--GAAC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7146 5 +     16388 G--GAAC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811432 5 -   3914936 G--GAGC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16043 5 +     24238 A--ACAC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330770 5 -   1826925 A--CAGC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8506 5 +     19643 G--GAAC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042167 5 -   6120653 G--GAAC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078412 5 +  43346337 G--GAAT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41612803 5 +  59628241 G--GAGC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43087 5 -     61512 A--CAGC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370748 5 -  60120075 A--CAGC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23003 5 +     30207 A--CAGC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20106 5 -     24934 A--CAGC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22955 5 +     30527 A--CAGC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34145 5 -     50087 A--CAGC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43915 5 +     51645 A--CAGC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413084 5 - 187317192 A--CAGC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397307 5 +  25927173 A--CAGC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46471 5 -     62418 A--CAGC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23126 5 +     24253 A--CAGC
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42947 5 +     59329 A--CAGC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268875 5 +    668171 A--CAGC
i Macaca_silenus.Contig273                               I 18 C 0
s Macaca_thibetana.k99_41370                                 20061 5 +     21031 A--CAGC
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  658 5 +     17132 A--CAGC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221392 5 -    270270 G--GAAC
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 20 C 0
s Mandrillus_leucophaeus.scaffold280                        320158 5 +  24302211 A--CAGC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354990 5 -    752769 A--CAGC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671688 5 -    737560 G--GAAC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218978 5 +    317179 G--GAAC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499136 5 +  40650429 C--AAAC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148592 5 +    207569 G--GAAC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23952 5 -     74585 G--GAGC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mico_argentatus.k141_582562                                 8025 5 +     17804 C--AAGC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8809 5 -     12984 C--AAGC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16760 5 -     26561 C--AAGC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982753 5 +  93316391 G--GAAC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43152 5 +    145209 G--AAGT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182810 5 +    200668 G--GGAC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360911 5 -   8254450 G--GAAC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39812 5 -     48117 G--GAAC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20185 5 -     27822 A--CAGC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6439 5 +     27589 G--GAGC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50544 5 -     62432 G--GAAC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176993 5 +    366855 A--GAAC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16686 5 -     63510 G--GAGC
i Mungos_mungo.MunMun_flattened_line_18455               I 13 C 0
s Murina_feae.MurFea_scaffold_17764                          36840 5 +     47283 G--GAGC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80679 6 -     86153 G-AAAAC
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 35 C 0
s Mustela_putorius.JH418006.1                             14352896 5 +  14710649 G--GAGC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790885 5 +  10118263 G--GAAC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385247 5 +   6019432 G--GAAC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381067 5 +   4330536 G--GAAC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3626 5 +      3929 G--GAAC
i Myotis_myotis.MyoMyo_scaffold_185951                   I 76 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117727 6 +    130748 G-AGGAC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26766 5 +     34575 A--CAGC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467040 5 -  31847680 G--GAGC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125776 5 -    149072 A--GAAC
i Noctilio_leporinus.NocLep_scaffold_7894                I 37 C 0
s Nomascus_annamensis.k141_1771965                           51497 5 -    132029 A--GAGC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7592 5 -     16345 A--GAGC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13477 5 +     22201 A--GAGC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411761 5 -  22158432 A--GAGC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23875 5 -     54323 A--GAGC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196405 5 +   9404916 G--GAGC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634518 5 + 196305487 G--GAAC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1276 5 -      3937 G--GAAC
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562757 5 - 199412804 G--GAAC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549429 5 -   3988456 G--AAAC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045653 5 -  11899542 G--GAGC
i Octodon_degus.JH651603.1                               I 44 C 0
s Odobenus_rosmarus.KB229312.1                             1449637 5 +   2017862 G--GAGC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11518 5 -     14239 G--AAAT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107101896 5 - 174332312 A--ACAC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37442 5 +    559221 G--GAGC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37900 5 -     51505 G--GAAC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350903 5 +   1103335 G--GAAC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470585 5 - 189151597 A--GAGC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22607 5 -    230217 G--GAGC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459933 5 -  18783137 G--GAGC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970653 5 +   8748460 G--GAGC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   240998 5 - 183742232 A--CAGC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7462 5 +     21308 A--CAGC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288501 5 -  20919399 A--CAGC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20117 5 -     27687 A--CAGC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13253 5 +     16796 A--CAGC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20063 5 -     23640 A--CAGC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13250 5 +     78924 G--GAGT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24184 5 +     31479 G--GAAC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16543 5 -     24908 G--GAAC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37707 5 +     38305 T--GACT
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Piliocolobus_badius.k141_2704958                             281 5 +     55023 A--CAGC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             282 5 +     40849 A--CAGC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252030 5 +  14605196 A--CAGC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1020 1 +     22231 G------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63032 5 +    207309 C--AAGC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4128 5 -     25401 C--AAGC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29867 5 +     58159 C--AAGC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30143 5 +     63561 C--AAGC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29906 5 +     51148 C--AAGC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554875 5 -   4542175 C--AAGC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29890 5 +     51125 C--AAGC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6297 5 +     39866 C--AAGC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1382 5 -      9282 C--AAGC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40786 5 -     87950 C--AAGC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41179 5 -     88961 C--AAGC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5878 5 -     39403 C--AAGC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40830 5 +     87928 C--AAGC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5875 5 -     60166 C--AAGC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12811 5 -     67232 C--AAGC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40727 5 -     90634 C--AAGC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42195 5 +     89403 C--AAGC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175725 5 - 189387572 A--GAGC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190543 5 -   9816681 A--GAGC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25380 5 +     69807 A--CAGC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42575 5 -     80239 A--CAGC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980767 5 +   4620579 G--GAAC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564235 5 -   2598838 G--GAAC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1871 5 -      7103 G--GAAC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2468 5 -     11706 G--GAAC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6204 5 -     30655 G--GAAC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32529 5 +     46564 G--GAAC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92800 5 -     98465 G--GAAC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6437 5 +     35169 G--GAAC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50052 5 -     66298 A--GAAC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2672 5 -     18639 G--GAGC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839021 5 -  28871421 G--GAAC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535587 5 -   4952924 G--GAAC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097250 5 +  38429054 G--GAGC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24790 5 +     91421 A--CAGC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151283 5 -   7812017 A--CAGC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5660 5 +     72585 A--CAGC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911686 5 +   3329780 A--GAAC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26600 5 +     27361 A--CAGC
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119967 5 + 195417433 A--CAGC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234208 5 -   7961872 A--CAGC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73003 5 -    116970 G--GAAC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1955 5 +     27962 C--ACGC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1963 5 +      6077 C--AAGC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2000 5 +      5971 C--ACGC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2054 5 +      5932 C--ACGC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               237 5 -      4390 C--ACGC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389303 5 - 209938924 C--ACGC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2002 5 +      5979 C--ACGC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2350 5 -      4301 C--AAGC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236463 5 +   5703754 C--AAGC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6053 5 +     21866 C--AAGC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114211 5 +    313613 T--GAAC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23107 5 +     27374 A--CAGC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26626 5 +     58920 A--CAGC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13122 5 -     45317 A--CAGC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20780 5 -     42441 A--CAGC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23460 5 -     29113 A--CAGC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26529 5 -     48123 A--CAGC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856517 5 -   1910179 G--GAAC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866494 5 +   3870691 T--GAAC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4671 5 -     97271 G--GAGG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123093 5 +    196729 G--GAGC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389034 5 +   1523678 A--GAGC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11828 5 +     22964 G--GAAC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 847 6 +      5583 G-AGGAC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189757 5 +    199430 G--GAAC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103711 5 -    539355 G--GAAC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5067 5 +      6850 G--GAGC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5108 5 +     20590 G--GAGC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350984 5 - 186847797 A--CAGC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17971 5 -     31044 G--GAAC
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477871 5 -    610378 G--GAAC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18671 5 +     26378 A--CAGC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31335 5 -     78344 G--CAGC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17992 5 +     25722 A--CAGC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26217 5 -     62838 A--CAGC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26334 5 +     46913 A--CAGC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7142 5 -     28527 A--CAGC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28156 5 -     64340 A--CAGC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26193 5 -     63452 A--CAGC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7636 5 +     22490 A--CAGC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1064 5 -      6147 A--CAGC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8038 5 -     13050 G--CAGC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253277 5 -   6242583 G--CAGC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59028 5 +     59866 A--CAGC
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832057 5 -   4065304 AGAG--T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6337 3 -     70247 A--G--T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105438 5 -    105689 G--GAAC
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 C 0
s Ursus_maritimus.KK499267.1                                180021 5 +   5085361 G--GAGC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23412 5 -     30710 G--GAAC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22319 5 -    147434 G--GAAC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103164 5 -    112863 G--GAGC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172263 5 -    224448 T--GAAC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26837 5 -     86975 G--GAGC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1516 5 +      2695 G--GAAT
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              22409 43 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     30080 43 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1925156 49 -  22651954 I
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    46921 0 +     77746 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37020814 1 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            34369 1 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         245060 1 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   105412 1 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    90983 1 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Mus_spretus.CM004101.1                                  39494921 1 + 130317789 I
e Mus_pahari.LT608297.1                                   58215776 2 +  89631738 I
e Mus_musculus.chr8                                       41685603 1 + 129401213 I
e Mus_caroli.FMAL02030609.1                                   4900 1 +      5579 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15960617 1 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17427472 1 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 46825 1 -    140813 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                           11198 1 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          29222 1 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cricetulus_griseus.LT883664.1                          213112912 1 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40456 1 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     18074 1 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3237 1 +     36723 T
s Acinonyx_jubatus.LLWD01001279.1                           810992 1 +   1699592 T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413506 1 +  29979442 T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213400 1 +    347723 T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16152 1 -     61208 G
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 32
s Allenopithecus_nigroviridis.k141_3755588                   45643 1 +     53615 T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41583 1 +     44087 T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14223 1 -     21945 T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15899 1 +     32033 T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70347 1 -     84148 T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42580 1 -     78289 T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42026 1 +     55831 T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40468 1 -     64179 T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22114 1 -     24835 T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39097 1 +     45454 T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44795 1 +     70886 T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6920 1 +     30854 T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31059 1 +     42133 T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174843 1 -    412891 T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Aotus_azarae.k141_118258                                   48869 1 -     65372 C
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42616 1 +     43593 C
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670629 1 +   5030052 C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22271 1 -     23494 C
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7407 1 +      8415 C
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14184 1 -     32367 T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3129 1 -     15198 T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 2
s Ateles_geoffroyi_b.tarseq_1536                               272859 1 +  21539123 T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9026 1 +     48076 T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4163 1 -     28759 T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31716 1 +     44353 T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47087 1 -     71267 T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21146 1 -     33135 T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4356 1 +     11645 T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4362 1 -     19611 T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6050 1 +     28062 T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41344 1 -     91139 T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18870 1 +     95584 T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18783 1 +    119600 T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8258 1 +     18648 T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7920 1 -     13885 T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16619 1 +     17162 T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451574 1 + 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17867 1 -     18408 T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503539 1 +  60362399 T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7175 1 -     23171 T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220518 1 +   9314153 T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613653 1 +  59632846 T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105234 1 -  63665305 T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268380 1 +    496798 G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3421 1 +      5315 T
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 2
s Cavia_aperea.AVPZ01000300.1                              4994116 1 +  23392119 C
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997558 1 +  23407841 C
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60659 1 -     66877 C
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3151 1 -     12580 T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41037 1 +     53515 A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369248 1 -  26074798 T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6137 1 -     34880 T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65232 1 -     89041 T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1553 1 -      1636 G
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490313 1 -  27778364 T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17146 1 +     27315 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138822 1 -   4669795 T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42562 1 +     47900 T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42395 1 -     44860 T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42378 1 -    148725 T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25476 1 -     40656 T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5445 1 +     20796 T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9635 1 -     17524 T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25357 1 -     34525 T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10066 1 -     25376 T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362661 1 -  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268373 1 +  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29834 1 -     45857 T
i Cercopithecus_neglectus.k141_858615                    C 0 I 7
s Cercopithecus_nictitans.k141_2995370                       25650 1 -     32606 T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1807 1 +      8499 T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23326 1 +     70610 T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20251 1 +     36323 T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10954 1 -     19938 T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28790 1 -     33796 T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3320 1 -     15404 T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7133 1 -     32913 T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17546 1 -     40346 T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17801 1 +    216457 T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17594 1 +     39636 T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1962 1 +      5346 T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40690 1 -    112038 T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6262 1 +     34062 T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341148 1 +  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7693 1 -     44032 T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302473 1 - 135778131 T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406908 1 -   2368649 T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376786 1 - 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                333 1 -     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805408 1 +  53390261 T
i Condylura_cristata.JH655891.1                          C 0 I 13
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           898 1 -      8242 T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2452 1 +     87169 T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642962 1 -   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3150 1 +     50838 C
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1741 1 +     36344 T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108287 1 -   2246927 G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290726 1 +  12879189 T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862867 1 -  20541912 T
i Desmodus_rotundus.KZ672289.1                           C 0 I 2
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662605 1 -   1390856 T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137390 1 -    198055 T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96616 1 -    115145 C
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948516 1 -  37912305 t
i Dipodomys_ordii.KN672350.1                             C 0 I 2
s Dipodomys_stephensi.DipSte_scaffold_89095                   3463 1 -     10735 T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 2
s Dolichotis_patagonum.DolPat_scaffold_80628                  8062 1 +     14636 C
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852072 1 - 111700974 T
i Echinops_telfairi.JH980293.1                           C 0 I 7
s Eidolon_helvum.AWHC01266696.1                               4433 1 +     19438 C
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105608 1 -  10337057 T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914088 1 +  41312741 T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576501 1 +  14770903 T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039591 1 -   4378816 T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373525 1 +  39960074 T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410311 1 -    498745 T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260671 1 +  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12898 1 -     24895 T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40610 1 -     70999 T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84569 1 +    112731 T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41142 1 +     68309 T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51467 1 -     65740 T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22097 1 -     75513 T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46290 1 -     97555 T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3017 1 +     30972 T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40740 1 -     52037 T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57141 1 -    111500 T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244902 1 - 206538554 T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114688 1 - 205367284 T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25792 1 -     30238 T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122757 1 -    137831 T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6297 1 +     22493 T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18349 1 -     32986 T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17209 1 +     18121 T
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32084 1 -     36801 T
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3574 1 -      8343 T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252585 1 - 186649187 T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11403 1 +     11903 T
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12825 1 -     40692 T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34226 1 +     49394 T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59095 1 -     66874 T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7968 1 -     42923 T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14968 1 -     53142 T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28937 1 -    327341 T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925205 1 -  22651954 C
i Heterocephalus_glaber.JH602082.1                       I 49 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548352 1 -   1711038 T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               47668 1 +     49977 T
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140578 1 -    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67611 1 +     83186 T
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 229 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69495 1 +    143317 C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3613 1 +     12352 T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10796 1 +     55766 T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050392 1 + 191637585 T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799270 1 +  11177569 T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384931 1 +   7955117 G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_2415743                                     481 1 +     11955 T
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237339 1 +   9596543 G
i Jaculus_jaculus.JH725527.1                             C 0 I 32
s Lagothrix_lagothricha.k141_246028                          41402 1 +    110728 T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59976 1 -     65777 T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757616 1 +  30322482 T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2067 1 -     13097 T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2018 1 +      5940 T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1652 1 -      5717 T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8268 1 -     11567 T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9649 1 -     12945 T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7145 1 +     29618 T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7142 1 +     31569 T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7152 1 +     24756 T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7151 1 +     16388 T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811437 1 -   3914936 T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16048 1 +     24238 T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330775 1 -   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8511 1 +     19643 T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042172 1 -   6120653 T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078417 1 +  43346337 G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41612808 1 +  59628241 T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43092 1 -     61512 T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370753 1 -  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23008 1 +     30207 T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20111 1 -     24934 T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22960 1 +     30527 T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34150 1 -     50087 T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43920 1 +     51645 T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413089 1 - 187317192 T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397312 1 +  25927173 T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46476 1 -     62418 T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23131 1 +     24253 T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42952 1 +     59329 T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268880 1 +    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20066 1 +     21031 T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  663 1 +     17132 T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221397 1 -    270270 C
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320163 1 +  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354995 1 -    752769 T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671693 1 -    737560 T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218983 1 +    317179 T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499141 1 +  40650429 A
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                       148597 1 +    207569 T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23957 1 -     74585 T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mico_argentatus.k141_582562                                 8030 1 +     17804 T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8814 1 -     12984 T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16765 1 -     26561 T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982758 1 +  93316391 T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43157 1 +    145209 T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182815 1 +    200668 T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 2
s Miniopterus_natalensis.LDJU01000034.1                    6360916 1 -   8254450 T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39817 1 -     48117 T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20190 1 -     27822 T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6444 1 +     27589 T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50549 1 -     62432 T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176998 1 +    366855 T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16691 1 -     63510 T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36845 1 +     47283 T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80685 1 -     86153 T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14352901 1 +  14710649 T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790890 1 +  10118263 T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385252 1 +   6019432 T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381072 1 +   4330536 T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3631 1 +      3929 T
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117733 1 +    130748 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26771 1 +     34575 T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467045 1 -  31847680 T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125781 1 -    149072 T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51502 1 -    132029 T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7597 1 -     16345 T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13482 1 +     22201 T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411766 1 -  22158432 T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23880 1 -     54323 T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196410 1 +   9404916 T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634523 1 + 196305487 T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1281 1 -      3937 T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562762 1 - 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549434 1 -   3988456 T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045658 1 -  11899542 C
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449642 1 +   2017862 T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11523 1 -     14239 T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107101901 1 - 174332312 T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37447 1 +    559221 T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37905 1 -     51505 T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350908 1 +   1103335 T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470590 1 - 189151597 T
i Pan_troglodytes.CM009242.2                             C 0 I 44
s Panthera_onca.PanOnc_flattened_line_3271                   22612 1 -    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459938 1 -  18783137 T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970658 1 +   8748460 T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241003 1 - 183742232 T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7467 1 +     21308 T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288506 1 -  20919399 T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20122 1 -     27687 T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13258 1 +     16796 T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20068 1 -     23640 T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13255 1 +     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24189 1 +     31479 T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16548 1 -     24908 T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37712 1 +     38305 T
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 I 2
s Petromus_typicus.PetTyp_scaffold_17301                     30123 1 -     56120 C
i Petromus_typicus.PetTyp_scaffold_17301                 I 43 C 0
s Piliocolobus_badius.k141_2704958                             286 1 +     55023 T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             287 1 +     40849 T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252035 1 +  14605196 T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             63037 1 +    207309 T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4133 1 -     25401 T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29872 1 +     58159 T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30148 1 +     63561 T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29911 1 +     51148 T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554880 1 -   4542175 T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29895 1 +     51125 T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6302 1 +     39866 T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1387 1 -      9282 T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40791 1 -     87950 T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41184 1 -     88961 T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5883 1 -     39403 T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40835 1 +     87928 T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5880 1 -     60166 T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12816 1 -     67232 T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40732 1 -     90634 T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42200 1 +     89403 T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175730 1 - 189387572 T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190548 1 -   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25385 1 +     69807 T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42580 1 -     80239 T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980772 1 +   4620579 T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564240 1 -   2598838 T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1876 1 -      7103 T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2473 1 -     11706 T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6209 1 -     30655 T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32534 1 +     46564 T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92805 1 -     98465 T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6442 1 +     35169 T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50057 1 -     66298 T
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2677 1 -     18639 T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839026 1 -  28871421 C
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535592 1 -   4952924 C
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097255 1 +  38429054 T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24795 1 +     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151288 1 -   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5665 1 +     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911691 1 +   3329780 T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26605 1 +     27361 T
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119972 1 + 195417433 T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234213 1 -   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73008 1 -    116970 C
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               1960 1 +     27962 T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1968 1 +      6077 T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2005 1 +      5971 T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2059 1 +      5932 T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               242 1 -      4390 T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389308 1 - 209938924 T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2007 1 +      5979 T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2355 1 -      4301 T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236468 1 +   5703754 T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6058 1 +     21866 T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114216 1 +    313613 T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23112 1 +     27374 T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26631 1 +     58920 T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13127 1 -     45317 T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20785 1 -     42441 T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23465 1 -     29113 T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26534 1 -     48123 T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856522 1 -   1910179 T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866499 1 +   3870691 A
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525              4676 1 -     97271 T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123098 1 +    196729 T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389039 1 +   1523678 T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11833 1 +     22964 T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 853 1 +      5583 T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189762 1 +    199430 T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103716 1 -    539355 T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5072 1 +      6850 G
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5113 1 +     20590 G
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350989 1 - 186847797 T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22452 1 -     33621 C
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 43 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17976 1 -     31044 T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477876 1 -    610378 T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_1189070                        18676 1 +     26378 T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31340 1 -     78344 T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17997 1 +     25722 T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26222 1 -     62838 T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26339 1 +     46913 T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7147 1 -     28527 T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28161 1 -     64340 T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26198 1 -     63452 T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7641 1 +     22490 T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1069 1 -      6147 T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8043 1 -     13050 T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253282 1 -   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59033 1 +     59866 T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832062 1 -   4065304 T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6340 1 -     70247 T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_7153                   105443 1 -    105689 T
i Uropsilus_gracilis.UroGra_scaffold_7153                C 0 N 0
s Ursus_maritimus.KK499267.1                                180026 1 +   5085361 T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23417 1 -     30710 T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22324 1 -    147434 T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103169 1 -    112863 T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172268 1 -    224448 T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26842 1 -     86975 T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1521 1 +      2695 G
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 34
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    46921 0 +     77746 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rattus_norvegicus.chr16                                 37020814 1 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Psammomys_obesus.NESX01036366.1                            34369 1 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             1021 0 +     22231 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         245060 1 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_2487                   105412 1 +    107918 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    90983 1 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Mus_spretus.CM004101.1                                  39494921 1 + 130317789 I
e Mus_pahari.LT608297.1                                   58215776 2 +  89631738 I
e Mus_musculus.chr8                                       41685603 1 + 129401213 I
e Mus_caroli.FMAL02030609.1                                   4900 1 +      5579 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Microtus_ochrogaster.CM001695.1                         15960617 1 +  27267610 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17427472 1 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 46825 1 -    140813 I
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                           11198 1 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          29222 1 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cricetulus_griseus.LT883664.1                          213112912 1 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40456 1 -     83289 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     18074 1 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3238 44 +     36723 CCT--AGA-CTTTTC-----CAAGGC-TTATATTGA--------------AGTGACTT-AATACATGT
s Acinonyx_jubatus.LLWD01001279.1                           810993 40 +   1699592 CCT--AGA-CTTCTC-----TAAGG-CTTA----GG--------------AAcaattg-aatatatat
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18075  8 +     63021 TAT--ATA-TT---------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413507 40 +  29979442 CCT--AGA-CTTTTC-----TAAGG-CTTG----gg--------------aataattt-aatatatat
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213401 40 +    347723 CCT--AGA-CTTTTC-----TAAAG-CTTG----gg--------------aataattt-aatatattt
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16185  8 -     61208 TGT--ATA-TT---------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_20030                I 32 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45644 44 +     53615 CCT--AGA-CTTTTC-----TGAAGC-TTATATTTA--------------AGTGACTT-CATACATGT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41584 44 +     44087 CCT--AGA-CTTTTC-----TGAAGC-TTATATTTA--------------AGTGACTT-CATACATGT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14224 44 -     21945 CCT--AGA-CTTTTC-----TGAAGC-TTATATTTA--------------AGTGACTT-CATACATGT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15900 44 +     32033 CCT--AGA-CTTTTC-----TGAAGC-TTATATTTA--------------AGTGACTT-CATACATGT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70348 44 -     84148 CCT--AGA-CCTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AAAACGTGT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42581 44 -     78289 CCT--AGA-CTTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACGTGT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42027 44 +     55831 CCT--AGA-CTTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AAAACGTGT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40469 43 -     64179 CC---AGA-CTTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AAAACGTGT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22115 44 -     24835 CCT--AGA-CTTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACGTGT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39098 44 +     45454 CCT--AGA-CTTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACGTGT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44796 44 +     70886 CCT--AGA-CTTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACGTGT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6921 44 +     30854 CCT--AGA-CTTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AAAACGTGT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31060 44 +     42133 CCT--AGA-CTTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AAAACGTGT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174846 36 -    412891 C----AGA-CTTTTT-----TAAGG-CTTG----GG--------------AATAATTT-AATGTG--T
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 C 0
s Aotus_azarae.k141_118258                                   48870 44 -     65372 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACATGT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42617 44 +     43593 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACATGT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670630 44 +   5030052 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACATGT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22272 44 -     23494 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACATGT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7408 44 +      8415 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACATGT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14185  8 -     32367 CCT--AGA-GT---------------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 39
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3132 36 -     15198 T----AGA-CTTTTC-----TACGG-CTTG----GG--------------AGTAATTT-AATATG--T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 2 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272860 44 +  21539123 CCT--AGA-CTTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AGTACATGT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9027 44 +     48076 CCT--AGA-CTTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AGTACATGT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4164 44 -     28759 CCT--AGA-CTTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AGTACATGT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31717 44 +     44353 CCT--AGA-CTTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AGTACATGT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47088 44 -     71267 CCT--AGA-CTTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AGTACATGT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21147 44 -     33135 CCT--AGA-CTTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AGTACATGT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4357 44 +     11645 CCT--AGA-TGTTCC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATGTATAT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4363 44 -     19611 CCT--AGA-TGTTCC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6051 44 +     28062 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACATGT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41345 44 -     91139 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACATGT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18871 44 +     95584 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACATGT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18784 44 +    119600 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACATGT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8259 44 +     18648 CCT--AGA-CTTCTC-----TGAGGC-TTGTATTAA--------------AGTGACTT-AATACATGT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7921 43 -     13885 CCT--AGA-CTTCTC-----TGAGGC-TTGTATTAA--------------AGTGACTT-AGTAC-TGT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16620 44 +     17162 CCT--AGA-CTTCTC-----TGAGGC-TTGTATTAA--------------AGTGACTT-AATACATGT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451575 44 + 189096842 CCT--AGA-CTTCTC-----TGAGGC-TTGTATTAA--------------AGTGACTT-AATACATGT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17868 44 -     18408 CCT--AGA-CTTCTC-----TGAGGC-TTGTATTAA--------------AGTGACTT-AATACATGT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503540 40 +  60362399 CCT--AGA-CTTTTC-----TAAGG-CTTG----GG--------------AATAGTTT-AATATGTAT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7176 40 -     23171 CCT--AGA-CTTTTC-----TAAGG-CTTG----GG--------------AATAGTTT-AATATGTAT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220519 40 +   9314153 CCT--AGA-CTTTTC-----TAAGG-CTTG----GG--------------AATAGTTT-AATATGTAT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613654 40 +  59632846 CCT--AGA-CTTTTC-----TAAGG-CTTG----GG--------------AATAGTTT-AATATGTAT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105235 40 -  63665305 CCT--AGA-CTTTTC-----TAAGG-CTTG----GG--------------AATAGTTT-AATATGTAT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268381 44 +    496798 TTT--AGA-CTTTGC-----TAAGTA-Ttatattaa--------------aatgattt-aatacatat
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3424 36 +      5315 C----AGA-CTTTTC-----TAAGG-CTTG----GG--------------AGTAATTT-ACTATG--T
i Carollia_perspicillata.CarPer_scaffold_170178          I 2 C 0
s Cavia_aperea.AVPZ01000300.1                              4994117  8 +  23392119 TCT--CGA-GT---------------------------------------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997559  8 +  23407841 TCT--CGA-GT---------------------------------------------------------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60660  8 -     66877 TCT--CGA-GT---------------------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3152 44 -     12580 CCT--AGA-CTTCTC-----TGAGGC-TTGTATTAA--------------AGTGACTT-AATACATGT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41038 44 +     53515 CCT--AGA-CTTCTC-----TGAGGC-TTGTATTAA--------------AGTGACTT-AATACATGT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369249 39 -  26074798 CCT--AGA-CTTCTC-----TGAGGC-TTA-----A--------------AGTGACTT-AATACATGG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6138 39 -     34880 CCT--AGA-CTTCTC-----TGAGGC-TTA-----A--------------AGTGACTT-AATACATGG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65233 39 -     89041 CCT--AGA-CTTCTC-----TGAGGC-TTA-----A--------------AGTGACTT-AATACATGG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1554 44 -      1636 TTT--AGA-CTTTGC-----TAAGTA-TTATATTAA--------------AATGATTT-AATACATAT
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490314 38 -  27778364 CC----GA-CTTTCC-----TAAGG-cttg----ga--------------aataattt-aatatatat
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17147 38 +     27315 CC----GA-CTTTCC-----TAAGG-CTTG----GA--------------AATAATTT-AATATATAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138823 44 -   4669795 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42563 44 +     47900 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42396 44 -     44860 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42379 44 -    148725 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25477  7 -     40656 CCT--AGA-C----------------------------------------------------------
i Cercopithecus_ascanius.k141_3120866                    C 0 I 26
s Cercopithecus_cephus.k141_4183004                           5446  7 +     20796 CCT--AGA-C----------------------------------------------------------
i Cercopithecus_cephus.k141_4183004                      C 0 I 26
s Cercopithecus_diana.k141_132293                             9636 44 -     17524 CCT--AGA-CTTTTC-----TGAAGC-TTATATTTA--------------AGTGACTT-CATACATGT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25358 44 -     34525 CCT--AGA-CTTTTC-----TGAAGC-TTATATTTA--------------AGTGACTT-CATACATGT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10067  7 -     25376 CCT--AGA-C----------------------------------------------------------
i Cercopithecus_lowei.k141_2101310                       C 0 I 25
s Cercopithecus_albogularis.ctg5                                  362662  7 -  39242232 CCT--AGA-C----------------------------------------------------------
i Cercopithecus_albogularis.ctg5                               C 0 I 26
s Cercopithecus_mona.ctg39                                  268374  7 +  21565898 CCT--AGA-C----------------------------------------------------------
i Cercopithecus_mona.ctg39                               C 0 I 25
s Cercopithecus_neglectus.k141_858615                        29842 37 -     45857 ----------TTTTC-----TGAAGC-TTATATTTA--------------AGTGATTT-CATACATGT
i Cercopithecus_neglectus.k141_858615                    I 7 C 0
s Cercopithecus_nictitans.k141_2995370                       25651  7 -     32606 CCT--AGA-C----------------------------------------------------------
i Cercopithecus_nictitans.k141_2995370                   C 0 I 26
s Cercopithecus_petaurista.k141_42573                         1808  7 +      8499 CCT--AGA-C----------------------------------------------------------
i Cercopithecus_petaurista.k141_42573                    C 0 I 26
s Cercopithecus_pogonias.k141_6079                           23327 44 +     70610 CCT--AGA-A-----TTTTCTGAAGC-TTATATTTA--------------AGTGATTT-CATACATGT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20252 44 +     36323 CCT--AGA-CTTTTC-----TGAAGC-TTATATTTA--------------AGTGACTT-CATACATGT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10955 40 -     19938 CCT--AGA-TTTTCC-----CAAGG-ATTG----GA--------------AATGATTT-AATATATAT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28791 44 -     33796 CTT--AGA-TGTTTA-----ATAGGC-TTATGTTAA--------------AAGGATTT-CATATATAT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3321 44 -     15404 CTT--AGA-TGTTTC-----CTAGGC-TTATGTTAA--------------AAGGATTT-CATATATAT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7134 44 -     32913 CCT--AGA-CTTCCC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACATGT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17547 44 -     40346 CCT--AGA-CTTCCC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACATGT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17802 44 +    216457 CCT--AGA-CTTCCC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACATGT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17595 44 +     39636 CCT--AGA-CTTCCC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACATGT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           1963 44 +      5346 CCT--AGA-CTCCTC-----CGAGGC-TTGTGTTAA--------------AGTGACTT-AATACGTGT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40691 44 -    112038 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACATGT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6263 44 +     34062 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACATGT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341149 44 +  18827391 CCT--AGA-CTTTTC-----TGAAGC-TTATATTTA--------------AGTGACTT-CATACATGT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7694 44 -     44032 CCT--AGA-CTTTTC-----TGAAGC-TTATATTTA--------------AGTGACTT-CATACATGT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302474 44 - 135778131 CCT--AGA-CTTTTC-----TGAAGC-TTATATTTA--------------AGTGACTT-CATACATGT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406909 44 -   2368649 CCT--AGA-CTTCTG-----TGAAAC-TTATATTAA--------------AGTGACTT-CATACATGT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376787 44 - 200372422 CCT--AGA-CTTCTG-----TGAAAC-TTATATTAA--------------AGTGACTT-CATACATGT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                334 44 -     84244 CCT--AGA-CTTCTG-----TGAAAC-TTATATTAA--------------AGTGACTT-CATACATGT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805422 27 +  53390261 ---------------------AAGA-CTTG----GT--------------AATAGTTT-AATAAGTAT
i Condylura_cristata.JH655891.1                          I 13 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           899 40 -      8242 C--TTAGG-CTTTTC-----TAGGG-CTTG----GG--------------GGTAATTC-AGTATCTAT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40457  8 -     83289 TTT--ATA-TT---------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             I 1 C 0
s Cricetulus_griseus.LT883664.1                          213112913  8 - 224834208 TCT--GTA-TT---------------------------------------------------------
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2453 40 +     87169 CCT--AGA-CTTTGC-----TAAGG-TTTG----AG--------------AATAATTT-AATATATAC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642963  8 -   1526836 CCC--AAA-GT---------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3151  8 +     50838 TAT--AGA-GT---------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1742  8 +     36344 CCT--TGA-GT---------------------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108288 36 -   2246927 CCT--AGA-TTTTCC-----CAAGG-ATTG----GA--------------AATGATGT-T----ATAT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290727 44 +  12879189 CTT--AGA-CGTTTC-----CCAGGC-TTATATTAA--------------AAAGATTT-CATATATAT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862870 36 -  20541912 C----AGA-CTTTTC-----CAAGG-GTTG----GG--------------AGTAACTT-AACATG--T
i Desmodus_rotundus.KZ672289.1                           I 2 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662606 38 -   1390856 CC----GA-CTTTCC-----TAAGG-Cttg----ga--------------aataattt-aatatatat
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137391 38 -    198055 CC----GA-CTTTCC-----TAAGG-CTTG----GA--------------AATAATTT-AATATATAT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            62852080 22 - 111700974 ---------------------------TTG----AA--------------ACTGATTT-AATTGTTAC
i Echinops_telfairi.JH980293.1                           I 7 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96617  8 -    115145 CCT--AGA-CT---------------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948519  9 -  37912305 cAC--ACATTT---------------------------------------------------------
i Dipodomys_ordii.KN672350.1                             I 2 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3466  9 -     10735 CAT--ATATTT---------------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 2 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8063  8 +     14636 TTT--TGA-GT---------------------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4434 38 +     19438 C----ATA-CCTTTC-----TAGGG-cttg----ga--------------aataattt-aatatatat
i Eidolon_helvum.AWHC01266696.1                          C 0 I 1
s Elephantulus_edwardii.JH947257.1                         9105609 40 -  10337057 TCC--AGA-TTTTTC-----TAAAT-CTTG----GA--------------AATGGGAT-AATATATAA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29223  8 +    110024 TCT--ATA-TT---------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01026522.1                           11199  8 +     18970 TCT--ATA-TT---------------------------------------------------------
i Ellobius_talpinus.LOJH01026522.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               24914089 40 +  41312741 CCT--AGA-CTTTTC-----TAAGG-CTTg----gt--------------aataattt-aatatatat
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576502 38 +  14770903 CTT--AGA-CTTGTC-----TAAGg-cttg----ga--------------aataattt-aatata--t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039592 40 -   4378816 CCT--AGA-CTTTTA-----TAAAG-Cttg----ta--------------aataattt-aatatatat
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373526 40 +  39960074 CCT--AGA-CTTTTA-----TAAAG-Cttg----ta--------------aataattt-aatatatat
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410312 40 -    498745 CCT--AGA-CTTTTA-----TAAAG-Cttg----ta--------------aataattt-aatatatat
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260672 44 +  21539334 CCT--AGA-CTTTTC-----TGAAGC-TTATATTTA--------------AGTGACTT-CATACATGT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12899 44 -     24895 CCT--AGA-TGTTTC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40611 44 -     70999 CCT--AGA-TGTTTC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84570 44 +    112731 CCT--AGA-TGTTTC-----CTAGGC-TCATATTAA--------------AAGGATTT-CATATATAT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41143 44 +     68309 CCT--AGA-TGTTTC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51468 44 -     65740 CCT--AGA-TGTTTC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22098 44 -     75513 CCT--AGA-TGTTTC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46291 44 -     97555 CCT--AGA-TGTTTC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3018 44 +     30972 CCT--AGA-TGTTTC-----CTAGGC-TTATATTAA--------------AGGGATTT-CATATATAT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40741 44 -     52037 CCT--AGA-TGTTTC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57142 44 -    111500 CCT--AGA-TGTTTC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244903 40 - 206538554 CCT--AGA-CTTCTC-----TAAGG-CTTA----GG--------------AAcaattg-aatatatat
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114689 40 - 205367284 TCT--AGA-CTTCTC-----TAAGG-CTTA----GG--------------Aacaattg-aatatatat
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25793 40 -     30238 CCT--AGA-CTTCTC-----TAAGG-CTTA----GG--------------AACAATTG-AATATATAT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122758 44 -    137831 CCT--AGA-CATTTC-----CCAGGA-TTATATTAA--------------AAGGAATT-CACATGTAT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6298 44 +     22493 CCT--AGA-CATTTC-----CCAGGA-TTATATTAA--------------AAGGAATT-CACATGTAT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18350 44 -     32986 CCT--AGA-CATTTC-----CCAGGA-TTATATTAA--------------AAGGAATT-TACATATAT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17210 46 +     18121 CCT--AGA-CCTTTC-----CAATGCCTTATATTAA--------------TATGACTTAAATATATAT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32085  8 -     36801 CGT--AGA-GT---------------------------------------------------------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 37
s Gorilla_beringei.k141_3358147                               3575 44 -      8343 CCT--AGA-CTTTTC-----CAAGGC-TTATATTGA--------------AGTGACTT-AATACATGT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252586 44 - 186649187 CCT--AGA-CTTTTC-----CAAGGC-TTATATTGA--------------AGTGACTT-AATACATGT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11404  8 +     11903 CCT--AAA-GT---------------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 I 37
s Hapalemur_alaotrensis.k141_330369                          12826 44 -     40692 CCT--ACA-TGTTTC-----TTAGGC-TCATATTAA--------------AAGGATTT-CATATATAT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34227 44 +     49394 CCT--ACA-TGTTTC-----TTAGGT-TCATATTAA--------------AAGGATTT-CATATATAT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59096 44 -     66874 CCT--ACA-TGTTTC-----TTAGGC-TCATATTAA--------------AAGGATTT-CATATATAT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          7969 44 -     42923 CCT--ACA-TGTTTC-----TTAGGC-TCATATTAA--------------AAGGATTT-CATATATAT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         14969 44 -     53142 CCT--ACA-TGTTTC-----TTAGGC-TCATACTAA--------------AAGGATTT-CATATATAT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28938 40 -    327341 CCT--AGA-CTTTTC-----TAAGG-CTTG----GG--------------AATAATTT-AATATGTGT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925206  8 -  22651954 CCT--GGA-GT---------------------------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1548353 40 -   1711038 C--CTAGA-CTTTCC-----TAAGG-CTTG----GG--------------AACGATTT-AATatttac
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 4980
s Hipposideros_galeritus.HipGal_scaffold_23202               47669 40 +     49977 C--CTAGA-CTTTCC-----TAAGG-CTTG----GG--------------AATGATTT-AATATTtac
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 1309
s Hoolock_leuconedys.ctg274                                    140579 39 -    630532 CCT--GGA-CTTTTC-----CGAGGC------TTAA--------------AGTAACTT-AATACATGT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67612 40 +     83186 TCT--AGA-CTTTTC-----TAAGG-CTTG----GG--------------AATCATTT-AATATATAT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69496  8 +    143317 TCT--TGA-GT---------------------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3614 39 +     12352 CCT--GGA-CTTTTC-----TGAGGC------TTAA--------------AGTGACTT-AATACATGT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10797 39 +     55766 CCT--GGA-CTTTTC-----TGAGGC------TTAA--------------AGTGACTT-AATACATGT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050393 39 + 191637585 CCT--GGA-CTTTTC-----CGAGGC------TTAA--------------AGTGACTT-AATACATGT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799271 39 +  11177569 CCT--GGA-CTTTTC-----CGAGGC------TTAA--------------AGTGACTT-AATACATGT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384933  2 +   7955117 ---------AT---------------------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 I 39
s Indri_indri.k141_2415743                                     482 44 +     11955 CCT--AGA-TGTTTC-----CTAGGC-TTATACTAA--------------AAGGATTT-CATATATAT
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237372  8 +   9596543 TGT--GTA-TT---------------------------------------------------------
i Jaculus_jaculus.JH725527.1                             I 32 C 0
s Lagothrix_lagothricha.k141_246028                          41403 44 +    110728 CCT--ACA-CTTTTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AGTACATGT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    59977 38 -     65777 CTT--AGA-CTTCCC-----CAAGG-CTTG----GA--------------AATAACTT-CACATG--T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757617 44 +  30322482 CCT--AGA-TGTTTC-----TTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2068 44 -     13097 CCG--AGA-CTTCTC-----CGAGGC-TTGTGTTAA--------------AGTGACTT-AATACATGT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2019 44 +      5940 CCG--AGA-CTTCTC-----CGAGGC-TTGTGTTAA--------------AGTGACTT-AATACATGT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1653 44 -      5717 CCG--AGA-CTTCTC-----CGAGGC-TTGTGTTAA--------------AGTGACTT-AATACATGT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8269 44 -     11567 CCT--AGA-CTTCTC-----TGAGGC-TTGTATTAA--------------AGTGACTT-AATACATGT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9650 44 -     12945 CCT--AGA-CTTCTC-----TGAGGC-TTGTATTAA--------------AGTGACTT-AATACATGT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7146 44 +     29618 CCC--AGA-TGTTTT-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATGTAC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7143 44 +     31569 CCC--AGA-TGTTTT-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATGTAC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7153 44 +     24756 CCC--AGA-TGTTTT-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATGTAC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7152 44 +     16388 CCC--AGA-TGTTTT-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATGTAC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811438 40 -   3914936 CCT--AGA-CTTTTC-----TAAGG-CTTG----gg--------------aataattt-aatatatat
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16049 43 +     24238 CTT--AGA-TGTTTC-----CAA-G-CTTACATTAA--------------AACATTGT-AATGAATGC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330776 44 -   1826925 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8512 44 +     19643 CCT--AGA-CATTTC-----CCAGGA-TTATATTAA--------------AATGAATT-CACATATAT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042173 44 -   6120653 CCT--AGA-CATTTC-----CCAGGA-TTATATTAA--------------AATGAATT-CACATATAT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078418 40 +  43346337 CCT--AGA-CTTTTC-----CAAGG-CTTG----GA--------------AATGATCT-AATAGATAT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41612809 40 +  59628241 CCT--AGA-CTTTTC-----TAAGG-CTTG----GG--------------AATAGTTT-AATATGTAT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43093 44 -     61512 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370754 44 -  60120075 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23009 44 +     30207 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20112 44 -     24934 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 22961 44 +     30527 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34151 44 -     50087 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43921 44 +     51645 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413090 44 - 187317192 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397313 44 +  25927173 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46477 44 -     62418 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23132 44 +     24253 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42953 44 +     59329 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268881 44 +    668171 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20067 44 +     21031 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  664 44 +     17132 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221398 38 -    270270 C----ATA-CCTTTC-----TTAGG-CTTG----GA--------------AATAATTT-AATATATAT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                        320164 44 +  24302211 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               354996 44 -    752769 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671694 40 -    737560 CCT--GGA-CTTTTC-----TAAGG-CTTA----GA--------------AATAAGTT-AATATAGAT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             218984 40 +    317179 CCT--GGA-CTTTTC-----TAAGG-CTTA----GA--------------AATAAGTT-AATATAGAT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499143  2 +  40650429 ---------AT---------------------------------------------------------
i Marmota_marmota.CZRN01000018.1                         I 1 I 39
s Megaderma_lyra.MegLyr_scaffold_4542                       148598 40 +    207569 C--TTGGG-CTTTTC-----TAGGG-CTTG----GG--------------GATAATTT-AATCTGTAT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23958 40 -     74585 CCT--AGA-CTTTTC-----CAAGG-CTTG----GT--------------AATAATTT-AATATATAT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46826  8 -    140813 TGT--ATA-TT---------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 C 0
s Mesocricetus_auratus.KB708134.1                         17427473  8 +  29670104 TCT--ATA-TT---------------------------------------------------------
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mico_argentatus.k141_582562                                 8031 44 +     17804 CCT--AGA-CTTCTC-----TGAGGC-TTGTATTAA--------------AGTGACTT-AATACATGT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8815 44 -     12984 CCT--AGA-CTTCTC-----TGAGGC-TTGTATTAA--------------AGTGACTT-AATACATGT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16766 44 -     26561 CCT--AGA-CTTCTC-----TGAGGC-TTGTATTAA--------------AGTGACTT-AATACATGT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982759 44 +  93316391 CTT--AGA-TGTTTC-----CTAGGC-TTATATTAA--------------AAggattt-catatatat
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43158 40 +    145209 CCT--AGA-CATTTC-----CAATG-CTTG----AA--------------GCTGTTTT-AGTAGTTAT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182818 36 +    200668 C----GGA-CTTTTC-----TAAGG-CTTG----GG--------------AATAATTT-AATATG--T
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 2 C 0
s Microtus_ochrogaster.CM001695.1                         15960618  8 +  27267610 TCT--ATA-TT---------------------------------------------------------
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360917 52 -   8254450 CTA--AGA-CTTTTC-----TAAGG-Ctta----aattatatagtaaatatataattt-aatata--t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39818 52 -     48117 CTA--AGA-CTTTTC-----TAAGG-CTTA----AATTATATAGTAAATATATAATTT-AATATA--T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20191 44 -     27822 CCT--AGA-CGTTTC-----TGAAGC-TTATATTTA--------------AGTGACTT-CATACATGT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6445 40 +     27589 CCT--AGA-CTTTTC-----TAAGG-CTTG----GG--------------AATAATTT-AATATATAT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50550 44 -     62432 CTT--AGA-TGTTTC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 176999 36 +    366855 C----AGA-TTTTTC-----TAAGG-CTTG----GG--------------AATAATTT-ACTATG--T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16692 40 -     63510 CCT--AGA-CTTTTC-----TAAGG-CTTG----GG--------------AATAATTT-AATATATAT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36846 38 +     47283 CTT--ACA-TTTTTC-----TAGGG-CTTG----GA--------------AATAATTT-AATGTA--T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   4901  8 +      5579 TGT--ATA-TT---------------------------------------------------------
i Mus_caroli.FMAL02030609.1                              I 1 C 0
s Mus_musculus.chr8                                       41685604  8 + 129401213 TGC--ATA-TT---------------------------------------------------------
i Mus_musculus.chr8                                      I 1 C 0
s Mus_pahari.LT608297.1                                   58215778  8 +  89631738 tgg--ata-tt---------------------------------------------------------
i Mus_pahari.LT608297.1                                  I 2 I 8
s Mus_spretus.CM004101.1                                  39494922  8 + 130317789 TGC--ATA-TT---------------------------------------------------------
i Mus_spretus.CM004101.1                                 I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80686  8 -     86153 CCT--AGA-GT---------------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 36
s Mustela_putorius.JH418006.1                             14352902 40 +  14710649 ACA--AGA-CTTTTC-----TAAGA-CTTG----GT--------------AATAagtt-aatacatat
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790891 38 +  10118263 CTT--AAA-TTTTTC-----TAAGG-CTTG----ga--------------aataattt-aatgta--t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385253 38 +   6019432 CTT--AAA-TTTTTC-----TAAGG-CTTG----ga--------------aataattt-aatgta--t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381073 38 +   4330536 CTT--AAA-TTTTTC-----TAAGG-CTTG----ga--------------aataattt-aatgta--t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3632 38 +      3929 CTT--AAA-CTTTTC-----TAAGG-CTTG----GA--------------GATAATTT-AATGTA--T
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117734 40 +    130748 CCT--AGA-TTTTCC-----CAAGG-ATTA----GA--------------AATCATTT-AATATATAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26772 44 +     34575 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467046 40 -  31847680 CCT--AGA-CTTTTC-----TAAGG-CTTG----gg--------------aataattt-aatatatat
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125782 36 -    149072 A----AGA-TTTTTC-----TAAGG-CTTG----GG--------------AATAATTT-AATATG--T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51503 39 -    132029 CCT--GGA-CTTTTC-----CGAGGC------TTAA--------------AGTGACTT-AATACATGT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7598 39 -     16345 CCT--GGA-CTTTTC-----CGAGGC------TTAA--------------AGTGACTT-AATACATGT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13483 39 +     22201 CCT--GGA-CTTTTC-----CGAGGC------TTAA--------------AGTGACTT-AATACATGT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411767 39 -  22158432 CCT--GGA-CTTTTC-----CGAGGC------TTAA--------------AGTGACTT-AATACATGT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23881 39 -     54323 CCT--GGA-CTTTTC-----CGAGGC------TTAA--------------AGTGACTT-AATACATGT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196411 40 +   9404916 CCT--AGA-CTTTTC-----TAATG-CTTG----GG--------------AATAGTTT-AATATGTAT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634524 44 + 196305487 CCT--AGA-CGTTTC-----CCAGGA-TTATATTAA--------------AAGGAATT-CACATATAT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1282 44 -      3937 CCT--AGA-CGTTTC-----CCAGGA-TTATATTAA--------------AAGGAATT-CACATATAT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562763 44 - 199412804 CCT--AGA-CATTTC-----CCAGGA-TTATATTAA--------------AAGGAATT-CACATATAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549435 43 -   3988456 CCT--AGA-CATTTC-----CAA-G-GCTTTATTAA--------------AGTGATTT-AATATGCAT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045659  8 -  11899542 CCT--AGA-GT---------------------------------------------------------
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449643 40 +   2017862 CCT--AGA-CTTTTC-----TAAAG-CTTG----gg--------------aataattt-aatatatat
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90984  8 -    140218 TCT--ATA-TT---------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105413  8 +    107918 TCT--ATA-TT---------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_2487                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11524 40 -     14239 CAC--AGA-CATTTT-----TAAGG-CTAG----GA--------------AATGATCT-AATATATAT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107101902 43 - 174332312 CTT--AGA-CGTTTC-----CAA-G-CTTACATTAA--------------AACATTGT-AATGAATAC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37448 40 +    559221 CCT--AGA-CTTTTC-----TAACG-CTTG----GT--------------AATAGTTT-AATATGTAT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37906 44 -     51505 CCT--AGA-CATTTC-----CCAGGA-TTATATTAA--------------AAGGAATT-CATATATAT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350909 44 +   1103335 CCT--AGA-CATTTC-----CCAGGA-TTATATTAA--------------AAGGAATT-CATATATAT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.KZ622849.1                                 31274 44 -    110857 CCT--AGA-CTTTTC-----CAAGGC-TTATATTGA--------------AGTGACTT-AATACATGT
i Pan_troglodytes.KZ622849.1                             I 194 I 29
s Panthera_onca.PanOnc_flattened_line_3271                   22613 40 -    230217 CCT--AGA-CTTCTC-----TAAGG-CTTA----GG--------------AACAATTG-AATATATAT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459939 40 -  18783137 CCT--AGA-CTTCTC-----TAAGG-CTTA----GG--------------AAcaattg-aatatatat
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970659 40 +   8748460 CCT--AGG-CTTCTC-----TAAGG-CTTA----GG--------------AAcaattg-aatatatat
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241004 44 - 183742232 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7468 44 +     21308 CCT--AGA-TTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288507 44 -  20919399 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20123 44 -     27687 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13259 44 +     16796 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20069 44 -     23640 CCT--AGA-TTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13256 40 +     78924 CCT--AGA-CTTTTC-----TAAGG-CTTG----GG--------------AATAATTT-AATGTATAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24190 44 +     31479 CTT--AGA-TATTTC-----CCAGGA-TTATATTAA--------------AAAGAATT-CATATATAT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16549 44 -     24908 CTT--AGA-TATTTC-----CCAGGA-TTATATTAA--------------AAAGAATT-CATATATAT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37715  9 +     38305 TAT--ACATTT---------------------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_28053   I 2 C 0
s Peromyscus_maniculatus.KI615324.1                         245061  3 +  18517816 TCT-----------------------------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30124  8 -     56120 TTT--ACA-GT---------------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             287 44 +     55023 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             288 44 +     40849 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252036 44 +  14605196 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1021 33 +     22231 -------A-CTTGTC-----TAAGG-TTTG----GA--------------AATAATTT-AATATA--T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63038 44 +    207309 CCT--AGA-CTTCTC-----TGAGGC-TTATGTTAA--------------AGTGACTT-AATACGTGT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4134 42 -     25401 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGAC---AATACGTGT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29873 44 +     58159 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACGTGT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30149 44 +     63561 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACGTGT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29912 44 +     51148 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACGTGT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554881 42 -   4542175 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGAC---AATACGTGT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29896 44 +     51125 CCT--AGA-CTTCTC-----TGAGGC-TTATATTAA--------------AGTGACTT-AATACGTGT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6303 44 +     39866 CCT--AGA-CGTCCC-----TGAGGC-TTACATTAA--------------AGTGACTT-AATACATGT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1388 44 -      9282 CCT--AGA-CGTCCC-----TGAGGC-TTACATTAA--------------AGTGACTT-AATACACGT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40792 44 -     87950 CCT--AGA-CGTCCC-----TGAGGC-TTACATTAA--------------AGTGACTT-AATACACGT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41185 44 -     88961 CCT--AGA-CGTCCC-----TGAGGC-TTACATTAA--------------AGTGACTT-AATACACGT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5884 44 -     39403 CCT--AGA-CGTCCC-----TGAGGC-TTACATTAA--------------AGTGACTT-AATACACGT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40836 44 +     87928 CCT--AGA-CGTCCC-----TGAGGC-TTACATTAA--------------AGTGACTT-AATACACGT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5881 44 -     60166 CCT--AGA-CGTCCC-----TGAGGC-TTACATTAA--------------AGTGACTT-AATACACCT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12817 44 -     67232 CCT--AGA-CGTCCC-----TGAGGC-TTACATTAA--------------AGTGACTT-AATACATGT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40733 44 -     90634 CCT--AGA-CGTCCC-----TGAGGC-TTACATTAA--------------AGTGACTT-AATACACGT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42201 44 +     89403 CCT--AGA-CGTCCC-----TGAGGC-TTACATTAA--------------AGTGACTT-AATACACCT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175731 44 - 189387572 CCT--AGA-CTTTTC-----CAAGGC-TCATATTAA--------------AGTGACTT-AATACATGT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190549 44 -   9816681 CCT--AGA-CTTTTC-----CAAGGC-TCATATTAA--------------AGTGACTT-AATACATGT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25386 44 +     69807 GCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42581 44 -     80239 GCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980773 44 +   4620579 CCT--AGA-TGTTTC-----TTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564241 44 -   2598838 CCT--AGA-TGTTCC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1877 44 -      7103 CCT--AGA-TGTTCC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2474 44 -     11706 CCT--AGA-TGTTCC-----CTAGGC-GTATATTAA--------------AAGGATTT-CATATATAT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6210 44 -     30655 CCT--AGA-TGTTCC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32535 44 +     46564 CCT--AGA-TGTTCC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92806 44 -     98465 CCT--AGA-TGTTCC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6443 44 +     35169 CCT--AGA-TGTTCC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34370  8 +     52041 TGT--ATA-TT---------------------------------------------------------
i Psammomys_obesus.NESX01036366.1                        I 1 C 0
s Pteronotus_parnellii.KE847780.1                            50058 36 -     66298 C----AGA-CTTTTC-----TATGG-CTTG----GG--------------AATAATTT-AATATG--T
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2678 40 -     18639 CCT--AGA-CTTTTC-----TAAGG-CTTG----GT--------------AATAATTT-AATATATAT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839027 38 -  28871421 C----ATA-CCTTTC-----TAAGg-cttg----ga--------------aataattt-aatatatat
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN525825.1                             3535593 38 -   4952924 C----ATA-CCTTTC-----TAAGG-cttg----ga--------------aataattt-aatatatat
i Pteropus_vampyrus.KN525825.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            18097256 40 +  38429054 CCT--AGA-CTTCTC-----TAAGG-CTTA----GG--------------Aacaattg-aatatatat
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24796 44 +     91421 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151289 44 -   7812017 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5666 44 +     72585 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020815  8 -  90668790 TGT--AAA-AT---------------------------------------------------------
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2911692 40 +   3329780 C--CTAGA-CTTTCC-----TAAGG-CTTG----gg--------------aacaattt-aatatatat
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 1296
s Rhinopithecus_bieti.k119_221883                            26606 44 +     27361 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104119973 44 + 195417433 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234214 44 -   7961872 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73009 38 -    116970 C----ATA-CCTTCT-----CAAGG-CTTG----GA--------------AATAATTT-AATATATAT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 1
s Saguinus_bicolor.k141_1429097                               1961 44 +     27962 CCT--AGA-CTCCTC-----CGAGGC-TTGTGTTAA--------------AGTGACTT-AATACGTGT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             1969 44 +      6077 CCT--AGA-CTCCTC-----CGAGGC-TTGTGTTAA--------------AGTGACTT-AATACGTGT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2006 44 +      5971 CCT--AGA-CTTCTC-----CGAGGC-TTGTGTTAA--------------AGTGACTT-AATACGTGT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2060 44 +      5932 CCT--AGA-CTTCTC-----CGAGGC-TTGTGTTAA--------------AGTGACTT-AATACCTGT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               243 44 -      4390 CCT--GGA-CTTCTC-----CGAGGC-TCGTGTTAA--------------AGTGACTT-AATACGTGT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389309 44 - 209938924 CCT--AGA-CTCCTC-----CGAGGC-TTGTGTTAA--------------AGTGACTT-AATACGTGT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2008 44 +      5979 CCT--AGA-CTTCTC-----CGAGGC-TTGTGTTAA--------------AGTGACTT-AATACGTGT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2356 44 -      4301 CCT--AGA-CTCCTC-----CGAGGC-TTGTGTTAA--------------AGTGACTT-AATACGTGT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236469 39 +   5703754 CCT--AGA-CTTCTC-----TGAGGC-TTA-----A--------------AGTGACTT-AATACATGG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6059 39 +     21866 CCT--AGA-CTTCTC-----TGAGGC-TTA-----A--------------AGTGACTT-AATACATGG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114217 40 +    313613 CCT--AGA-CTTTTTT----TAAGA-CTTG-----T--------------AATAGTTT-AATAAATCT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23113 44 +     27374 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26632 44 +     58920 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13128 44 -     45317 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20786 44 -     42441 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23466 44 -     29113 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26535 44 -     48123 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856523 40 -   1910179 CCT--AGA-CTTTTC-----TAAGG-CTCG----GA--------------ATTAATTT-CATTTATAT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866501  2 +   3870691 ---------AT---------------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       I 1 I 39
s Spilogale_gracilis.SpiGra_flattened_line_13525              4677 40 -     97271 CCT--GGA-CTTTTC-----TAGGG-CTTG----GG--------------AATAATTT-TTAATATAT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123099 40 +    196729 CCT--AGA-CTTTTC-----TAAGG-CTTG----GG--------------AATACTTT-AATATGTAT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389040 39 +   1523678 CCT--GGA-CTTTTC-----CGAGGC------TTAA--------------AGTGACTT-AATACATGT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11834 38 +     22964 CTT--AGA-CTTTTC-----TAAGA-CTTG----GA--------------AATAATTT-AATATG--T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 854 40 +      5583 CCT--AGA-CTTTCC-----CAAGG-ATTA----GA--------------AATCATTT-AATACATAT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189763 40 +    199430 CCT--AGA-CTTTTC-----TAAGG-CTTG----GA--------------AACAATTT-AATATATAT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103717 40 -    539355 ACT--AGA-CTTTTC-----TAAGG-CTTG----GA--------------AACAATGT-AATATATAT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5073 44 +      6850 TTT--AGA-CTTTGC-----TAAGTA-TTATATTAA--------------AATAATTT-AATACATAT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5114 44 +     20590 TTT--AGA-CTTTGC-----TAAGTA-TTATATTAA--------------AATAATTT-AATACATAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           350990 44 - 186847797 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22453  8 -     33621 TGT--ACA-GT---------------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   17977 40 -     31044 CCT--AGA-TTAGCC-----CAAGG-ATTA----GA--------------AATGATCT-AATACATAT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477879 36 -    610378 C----AGA-CTCTTC-----TGAGG-CTTG----GG--------------AGTCATTT-AATATG--T
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 C 0
s Trachypithecus_auratus.k141_1189070                        18677 44 +     26378 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31341 44 -     78344 CCT--AGG-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       17998 44 +     25722 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26223 44 -     62838 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26340 44 +     46913 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7148 44 -     28527 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28162 44 -     64340 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26199 44 -     63452 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7642 44 +     22490 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1070 44 -      6147 CCT--AGA-CTTTTC-----TTAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8044 44 -     13050 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253283 44 -   6242583 CCT--AGG-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59034 44 +     59866 CCT--AGA-CTTTTC-----TGAAGC-TTATATTAA--------------AGTGACTT-CATACATGT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832063 44 -   4065304 TCT--TGA-CTTTTC-----CAAGG-TTTATATTAA--------------AATGCTTT-AGTATACAT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6341 44 -     70247 TCT--CGA-CTTTTC-----CAAGG-TTTATATTAA--------------AATGCTTT-AGCATACAT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     417 27 -     21056 ---------------------AAGG-CTTG----GT--------------TAAGATTT-AATAAACAT
i Uropsilus_gracilis.UroGra_scaffold_46687               N 0 C 0
s Ursus_maritimus.KK499267.1                                180027 35 +   5085361 CCT--AGG-CTTTTT-----TAAGG-CTTA----GG--------------AATA------ATATATAT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23418 44 -     30710 CCT--AGA-TGTTTC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22325 44 -    147434 CCT--AGA-TGCTTC-----CTAGGC-TTATATTAA--------------AAGGATTT-CATATATAT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103170 40 -    112863 CCT--AGA-CTTTTC-----TAAGG-CTTG----GG--------------AATAGTTT-AATATGTAT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172269  8 -    224448 CTT--AGA-GT---------------------------------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 39
s Zalophus_californianus.ZalCal_flattened_line_17732         26843 40 -     86975 CCT--AGA-CTTTTC-----TAAAG-CTTG----GG--------------AATAATTT-AATATATAT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1556  8 +      2695 TGT--GTA-TT---------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 34 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    46921  0 +     77746 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3282 4 +     36723 TTG-T
s Acinonyx_jubatus.LLWD01001279.1                           811033 4 +   1699592 ttg-t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18083 1 +     63021 ----T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413547 3 +  29979442 -tg-t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213441 4 +    347723 -ttgt
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16193 1 -     61208 ----T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45688 4 +     53615 TTG-T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41628 4 +     44087 TTG-T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14268 4 -     21945 TTG-T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15944 4 +     32033 TTG-T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70392 4 -     84148 TTG-T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42625 4 -     78289 TTG-T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42071 4 +     55831 TTG-T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40512 4 -     64179 TTG-T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22159 4 -     24835 TTG-T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39142 4 +     45454 TTG-T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44840 4 +     70886 TTG-T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6965 4 +     30854 TTG-T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31104 4 +     42133 TTG-T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174882 4 -    412891 TTG-C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48914 4 -     65372 TTG-T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42661 4 +     43593 TTG-T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670674 4 +   5030052 TTG-T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22316 4 -     23494 TTG-T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7452 4 +      8415 TTG-T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14232 1 -     32367 ----T
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 39 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3168 4 -     15198 TTG-C
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272904 4 +  21539123 TTG-T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9071 4 +     48076 TTG-T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4208 4 -     28759 TTG-T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31761 4 +     44353 TTG-T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47132 4 -     71267 TTG-T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21191 4 -     33135 TTG-T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4401 4 +     11645 TTG-C
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4407 4 -     19611 TTG-C
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6095 4 +     28062 CTG-T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41389 4 -     91139 CTG-T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18915 4 +     95584 CTG-T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18828 4 +    119600 CTG-T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8303 4 +     18648 TTG-T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7964 4 -     13885 TTG-T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16664 4 +     17162 TTG-T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451619 4 + 189096842 TTG-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17912 4 -     18408 TTG-T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503580 3 +  60362399 -TG-C
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7216 3 -     23171 -TG-C
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220559 3 +   9314153 -TG-C
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613694 3 +  59632846 -TG-C
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105275 3 -  63665305 -TG-C
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268425 4 +    496798 ttg-t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3460 4 +      5315 TTG-C
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994125 1 +  23392119 ----T
i Cavia_aperea.AVPZ01000300.1                            C 0 I 37
s Cavia_porcellus.DS562891.1                               4997567 1 +  23407841 ----T
i Cavia_porcellus.DS562891.1                             C 0 I 37
s Cavia_tschudii.CavTsc_scaffold_23560                       60668 1 -     66877 ----T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 37
s Cebuella_niveiventris.k141_592277                           3196 4 -     12580 TTG-T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41082 4 +     53515 TTG-T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369288 4 -  26074798 TTC-T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6177 4 -     34880 TTC-T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65272 4 -     89041 TTC-T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1598 4 -      1636 TTG-T
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490352 4 -  27778364 ttg-t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17185 4 +     27315 TTG-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138867 4 -   4669795 TTG-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42607 4 +     47900 TTG-T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42440 4 -     44860 TTG-T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42423 4 -    148725 TTG-T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9680 4 -     17524 TTG-T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25402 4 -     34525 TTG-T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29879 4 -     45857 TTG-T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23371 4 +     70610 TTG-T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20296 4 +     36323 TTG-T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10995 4 -     19938 TTG-T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28835 4 -     33796 CTG-C
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3365 4 -     15404 CTG-C
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7178 4 -     32913 TTG-T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17591 4 -     40346 TTG-T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17846 4 +    216457 TTG-T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17639 4 +     39636 TTG-T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2007 4 +      5346 TTG-T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40735 4 -    112038 CTG-T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6307 4 +     34062 CTG-T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341193 4 +  18827391 TTG-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7738 4 -     44032 TTG-T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302518 4 - 135778131 TTG-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406953 4 -   2368649 TTG-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376831 4 - 200372422 TTG-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                378 4 -     84244 TTG-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805449 4 +  53390261 TTG-T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           939 4 -      8242 TTA-T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40465 1 -     83289 ----T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112921 1 - 224834208 ----T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2493 4 +     87169 TTG-T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642971 1 -   1526836 ----T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3159 1 +     50838 ----T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 37
s Cuniculus_paca.CunPac_flattened_line_7025                   1750 1 +     36344 ----T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 37
s Dasypus_novemcinctus.JH564415.1                          2108324 4 -   2246927 TTG-T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290771 4 +  12879189 TTG-C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862906 4 -  20541912 TTG-C
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662644 4 -   1390856 ttg-t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137429 4 -    198055 TTG-T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96625 1 -    115145 ----T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 37
s Dipodomys_ordii.KN672350.1                              18948528 1 -  37912305 ----T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3475 1 -     10735 ----T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8071 1 +     14636 ----T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 37
s Echinops_telfairi.JH980293.1                            62852102 2 - 111700974 TT---
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4473 4 +     19438 taG-T
i Eidolon_helvum.AWHC01266696.1                          I 1 C 0
s Elephantulus_edwardii.JH947257.1                         9105649 4 -  10337057 TTG-C
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29231 1 +    110024 ----C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11207 1 +     18970 ----C
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914129 3 +  41312741 -tt-t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576540 4 +  14770903 ttg-t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039632 4 -   4378816 ttg-t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373566 4 +  39960074 ctG-T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410352 4 -    498745 ttg-t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260716 4 +  21539334 TTG-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12943 4 -     24895 TTG-C
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40655 4 -     70999 TTG-C
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84614 4 +    112731 TTG-C
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41187 4 +     68309 TTG-C
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51512 4 -     65740 TTG-C
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22142 4 -     75513 TTG-C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46335 4 -     97555 TTG-C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3062 4 +     30972 TTG-C
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40785 4 -     52037 TTG-C
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57186 4 -    111500 TTG-C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244943 4 - 206538554 ttg-t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114729 4 - 205367284 ttg-t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25833 4 -     30238 TTG-T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122802 4 -    137831 TTG-C
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6342 4 +     22493 TTG-C
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18394 4 -     32986 TTG-C
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17256 4 +     18121 TTG-T
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32130 1 -     36801 ----T
i Glis_glis.GliGli_scaffold_33859                        I 37 C 0
s Gorilla_beringei.k141_3358147                               3619 4 -      8343 TTG-T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252630 4 - 186649187 TTG-T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11449 1 +     11903 ----T
i Graphiurus_murinus.GraMur_scaffold_90206               I 37 C 0
s Hapalemur_alaotrensis.k141_330369                          12870 4 -     40692 TTG-C
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34271 4 +     49394 TTG-C
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59140 4 -     66874 TTG-C
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8013 4 -     42923 TTG-C
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15013 4 -     53142 TTG-C
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28978 4 -    327341 TTG-T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925214 1 -  22651954 ----T
i Heterocephalus_glaber.JH602082.1                       C 0 I 37
s Hipposideros_galeritus.HipGal_scaffold_23202               49018 4 +     49977 TTG-T
i Hipposideros_galeritus.HipGal_scaffold_23202           I 1309 C 0
s Hoolock_leuconedys.ctg274                                    140618 4 -    630532 TTG-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67652 4 +     83186 TTG-T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69504 1 +    143317 ----T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 37
s Hylobates_agilis.k141_1155965                               3653 4 +     12352 TTG-T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10836 4 +     55766 TTG-T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050432 4 + 191637585 TTG-T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799310 4 +  11177569 TTG-T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384974 1 +   7955117 ----T
i Ictidomys_tridecemlineatus.JH393364.1                  I 39 C 0
s Indri_indri.k141_2415743                                     526 4 +     11955 TTG-C
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237380 1 +   9596543 ----T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41447 4 +    110728 TTG-T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60015 4 -     65777 TTG-T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757661 4 +  30322482 TTG-C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2112 4 -     13097 TTG-T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2063 4 +      5940 TTG-T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1697 4 -      5717 TTG-T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8313 4 -     11567 TTG-T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9694 4 -     12945 TTG-T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7190 4 +     29618 TTG-C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7187 4 +     31569 TTG-C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7197 4 +     24756 TTG-C
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7196 4 +     16388 TTG-C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811478 3 -   3914936 -tg-t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16092 4 +     24238 TTG-T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330820 4 -   1826925 TTG-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8556 4 +     19643 TTG-C
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042217 4 -   6120653 TTG-C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078458 2 +  43346337 TT---
i Loxodonta_africana.GL010049.1                          C 0 I 3
s Lycaon_pictus.CM007581.1                                41612849 3 +  59628241 -TG-C
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43137 4 -     61512 TTG-T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370798 4 -  60120075 TTG-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23053 4 +     30207 TTG-T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20156 4 -     24934 TTG-T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23005 4 +     30527 TTG-T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34195 4 -     50087 TTG-T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43965 4 +     51645 TTG-T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413134 4 - 187317192 TTG-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397357 4 +  25927173 TTG-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46521 4 -     62418 TTG-T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23176 4 +     24253 TTG-T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 42997 4 +     59329 TTG-T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268925 4 +    668171 TTG-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20111 4 +     21031 TTG-T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  708 4 +     17132 TTG-T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221437 4 -    270270 TAG-T
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                        320208 4 +  24302211 TTG-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355040 4 -    752769 TTG-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671734 4 -    737560 GTG-T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219024 4 +    317179 GTG-T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499184 1 +  40650429 ----T
i Marmota_marmota.CZRN01000018.1                         I 39 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148638 4 +    207569 TTG-T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23998 3 -     74585 -TT-T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46834 1 -    140813 ----T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427481 1 +  29670104 ----T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8075 4 +     17804 TTG-T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8859 4 -     12984 TTG-T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16810 4 -     26561 TTG-T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982803 4 +  93316391 ttg-c
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43198 2 +    145209 TT---
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182854 4 +    200668 TTG-C
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960626 1 +  27267610 ----C
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360969 4 -   8254450 ttg-t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39870 4 -     48117 TTG-T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20235 4 -     27822 TTG-T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6485 3 +     27589 -TG-T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50594 4 -     62432 TTG-C
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177035 4 +    366855 TCA-T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16732 4 -     63510 TTG-T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36884 4 +     47283 TTG-T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   4909 1 +      5579 ----T
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685612 1 + 129401213 ----T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39494930 1 + 130317789 ----T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80730 1 -     86153 ----T
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 36 C 0
s Mustela_putorius.JH418006.1                             14352942 3 +  14710649 -tt-t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9790929 4 +  10118263 ttg-T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385291 4 +   6019432 ttg-T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381111 4 +   4330536 ttg-T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3670 4 +      3929 TTG-T
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117774 4 +    130748 TTG-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26816 4 +     34575 TTG-T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467086 3 -  31847680 -tg-t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125818 4 -    149072 TTT-T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51542 4 -    132029 TTG-T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7637 4 -     16345 TTG-T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13522 4 +     22201 TTG-T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411806 4 -  22158432 TTG-T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23920 4 -     54323 TTG-T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196451 3 +   9404916 -TG-C
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634568 4 + 196305487 TTG-C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1326 4 -      3937 TTG-C
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562807 4 - 199412804 TTG-C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549478 4 -   3988456 TTG-T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045667 1 -  11899542 ----T
i Octodon_degus.JH651603.1                               C 0 I 37
s Odobenus_rosmarus.KB229312.1                             1449683 3 +   2017862 -tg-t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    90992 1 -    140218 ----A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105421 1 +    107918 ----T
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_171931              11564 4 -     14239 TTG-T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107101945 4 - 174332312 TTG-T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37488 3 +    559221 -TG-C
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37950 4 -     51505 TTG-C
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350953 4 +   1103335 TTG-C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470635 4 - 189151597 TTG-T
i Pan_troglodytes.CM009242.2                             I 44 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22653 4 -    230217 TTG-T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459979 4 -  18783137 ttg-t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970699 4 +   8748460 ttg-t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241048 4 - 183742232 TTG-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7512 4 +     21308 TTG-T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288551 4 -  20919399 TTG-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20167 4 -     27687 TTG-T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13303 4 +     16796 TTG-T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20113 4 -     23640 TTG-T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13296 4 +     78924 TTG-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24234 4 +     31479 TTG-C
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16593 4 -     24908 TTG-C
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37724 1 +     38305 ----T
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30132 1 -     56120 ----T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 32
s Piliocolobus_badius.k141_2704958                             331 4 +     55023 TTG-T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             332 4 +     40849 TTG-T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252080 4 +  14605196 TTG-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1054 4 +     22231 TTG-T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63082 4 +    207309 CTG-T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4176 4 -     25401 CTG-T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29917 4 +     58159 CTG-T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30193 4 +     63561 CTG-T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29956 4 +     51148 CTG-T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554923 4 -   4542175 CTG-T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29940 4 +     51125 CTG-T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6347 4 +     39866 TTG-T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1432 4 -      9282 TTG-T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40836 4 -     87950 TTG-T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41229 4 -     88961 TTG-T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5928 4 -     39403 TTG-T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40880 4 +     87928 TTG-T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5925 4 -     60166 TTG-T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12861 4 -     67232 TTG-T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40777 4 -     90634 TTG-T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42245 4 +     89403 TTG-T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175775 4 - 189387572 TTG-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190593 4 -   9816681 TTG-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25430 4 +     69807 TTG-T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42625 4 -     80239 TTG-T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980817 4 +   4620579 TTG-C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564285 4 -   2598838 TTG-C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1921 4 -      7103 TTG-C
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2518 4 -     11706 TTG-C
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6254 4 -     30655 TTG-C
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32579 4 +     46564 TTG-C
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92850 4 -     98465 TTG-C
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6487 4 +     35169 TTG-C
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34378 1 +     52041 ----T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50094 4 -     66298 TTG-T
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2718 3 -     18639 -TT-T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839066 4 -  28871421 tag-T
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             3535632 4 -   4952924 tag-T
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            18097296 4 +  38429054 ttg-t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24840 4 +     91421 TTG-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151333 4 -   7812017 TTG-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5710 4 +     72585 TTG-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020823 1 -  90668790 ----T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913028 4 +   3329780 TTG-T
i Rhinolophus_sinicus.LVEH01000134.1                     I 1296 C 0
s Rhinopithecus_bieti.k119_221883                            26650 4 +     27361 TTG-T
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120017 4 + 195417433 TTG-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234258 4 -   7961872 TTG-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73048 4 -    116970 TAG-T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 1 C 0
s Saguinus_bicolor.k141_1429097                               2005 4 +     27962 TTG-T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2013 4 +      6077 GTG-T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2050 4 +      5971 TTG-T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2104 4 +      5932 TTG-T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               287 4 -      4390 TTG-T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389353 4 - 209938924 TTG-T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2052 4 +      5979 TTG-T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2400 4 -      4301 GTG-T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236508 4 +   5703754 TTC-T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6098 4 +     21866 TTC-T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114257 4 +    313613 TTG-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23157 4 +     27374 TTG-A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26676 4 +     58920 TTG-T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13172 4 -     45317 TTG-A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20830 4 -     42441 TTG-A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23510 4 -     29113 TTG-A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26579 4 -     48123 TTG-T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856563 4 -   1910179 TTG-T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866542 1 +   3870691 ----T
i Spermophilus_dauricus.KZ294078.1                       I 39 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4717 3 -     97271 -TG-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123139 4 +    196729 TTG-T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389079 4 +   1523678 TTG-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11872 4 +     22964 TTG-T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 894 4 +      5583 TTG-T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189803 4 +    199430 CTG-T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103757 4 -    539355 TTG-T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5117 4 +      6850 TTG-T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5158 4 +     20590 TTG-T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351034 4 - 186847797 TTG-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22461 1 -     33621 ----T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 32
s Tolypeutes_matacus.TolMat_scaffold_31955                   18017 4 -     31044 TTG-T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477915 4 -    610378 TTG-C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18721 4 +     26378 TTG-A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31385 4 -     78344 TTG-A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18042 4 +     25722 TTG-A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26267 4 -     62838 TTG-A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26384 4 +     46913 TTG-A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7192 4 -     28527 TTG-A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28206 4 -     64340 TTG-A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26243 4 -     63452 TTG-A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7686 4 +     22490 TTG-A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1114 4 -      6147 TTG-A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8088 4 -     13050 TTG-A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253327 4 -   6242583 TTG-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59078 4 +     59866 TTG-A
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832107 4 -   4065304 TTG-T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6385 4 -     70247 TTG-T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     444 4 -     21056 TTG-T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180062 3 +   5085361 -TG-T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23462 4 -     30710 TTG-C
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22369 4 -    147434 TTG-C
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103210 3 -    112863 -TG-C
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172316 1 -    224448 ----T
i Xerus_inauris.XerIna_scaffold_2302                     I 39 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26883 3 -     86975 -TG-T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1564 1 +      2695 ----T
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    46921 0 +     77746 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         245064 0 +  18517816 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786 8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3286 11 +     36723 CAATGTTTCCT
s Acinonyx_jubatus.LLWD01001279.1                           811037 11 +   1699592 aaattgttCCT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18084 11 +     63021 ATGAATGCACT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413550 11 +  29979442 caatgcttact
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213445 11 +    347723 caatgcttact
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 215
s Allactaga_bullata.AllBul_scaffold_20030                    16194 11 -     61208 GTGAATGTACT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45692 11 +     53615 CAATGTTTCCT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41632 11 +     44087 CAATGTTTCCT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14272 11 -     21945 CAATGTTTCCT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15948 11 +     32033 CAATGTTTCCT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70396 11 -     84148 CAATGTTTCCT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42629 11 -     78289 CAATGTTTCCT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42075 11 +     55831 CAATGTTTCCT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40516 11 -     64179 CAATGTTTCCT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22163 11 -     24835 CAATGTTTCCT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39146 11 +     45454 CAATGTTTCCT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44844 11 +     70886 CAATGTTTCCT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6969 11 +     30854 CAATGTTTCCT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31108 11 +     42133 CAATGTTTCCT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174886 11 -    412891 CAATGCTCACT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48918 11 -     65372 CAATGTTTCCT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42665 11 +     43593 CAATGTTTCCT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670678 11 +   5030052 CAATGTTTCCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22320 11 -     23494 CAATGTTTCCT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7456 11 +      8415 CAATGTTTCCT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14233 11 -     32367 CAATGTTTATT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3172 11 -     15198 CAACGCTCACT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272908 11 +  21539123 CAATGTTTCCT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9075 11 +     48076 CAATGTTTCCT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4212 11 -     28759 CAATGTTTCCT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31765 11 +     44353 CAATGTTTCCT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47136 11 -     71267 CAATGTTTCCT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21195 11 -     33135 CAATGTTTCCT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4405 11 +     11645 CCATGTTTACT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4411 11 -     19611 CCATGTTTACT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6099 11 +     28062 CAGTGTTTCCT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41393 11 -     91139 CAGTGTTTCCT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18919 11 +     95584 CAGTGTTTCCT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18832 11 +    119600 CAGTGTTTCCT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8307 11 +     18648 CAATGTTCACT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7968 11 -     13885 CAATGTTTCCT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16668 11 +     17162 CAATGTTCGCT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451623 11 + 189096842 CAATGTTCGCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17916 11 -     18408 CAATGTTCGCT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503583 11 +  60362399 CAATGCTTACT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7219 11 -     23171 CAATGCTTACT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220562 11 +   9314153 CAATGCttact
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613697 11 +  59632846 CAATGCttact
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105278 11 -  63665305 CAATGCttact
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268429 11 +    496798 aaATGTTTACT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3464 11 +      5315 CAATGCCCGCT
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994163 11 +  23392119 CAATATTTact
i Cavia_aperea.AVPZ01000300.1                            I 37 C 0
s Cavia_porcellus.DS562891.1                               4997605 11 +  23407841 CAATATTTact
i Cavia_porcellus.DS562891.1                             I 37 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60706 11 -     66877 CAATATTTACT
i Cavia_tschudii.CavTsc_scaffold_23560                   I 37 C 0
s Cebuella_niveiventris.k141_592277                           3200 11 -     12580 CAATGTTCGCT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41086 11 +     53515 CAATGTTCGCT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369292 11 -  26074798 GAATGTTTCCT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6181 11 -     34880 GAATGTTTCCT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65276 11 -     89041 GAATGTTTCCT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1602 11 -      1636 AAATGTTTACT
i Cephalopachus_bancanus.k141_72622                      C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490356 11 -  27778364 caatGCTTACT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17189 11 +     27315 CAATGCTTACT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138871 11 -   4669795 CAATGTTTCCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42611 11 +     47900 CAATGTTTCCT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42444 11 -     44860 CAATGTTTCCT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42427 11 -    148725 CAATGTTTCCT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9684 11 -     17524 CAATGTTTCCT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25406 11 -     34525 CAATGTTTCCT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29883 11 -     45857 CAGTGTTTCCT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23375 11 +     70610 CAATGTTTCCT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20300 11 +     36323 CAATGTTTCCT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            10999 11 -     19938 CAATGCCTACT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28839 11 -     33796 CAATGTTTACT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3369  9 -     15404 CAATGTTTA--
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7182 11 -     32913 CGATGTTTCCT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17595 11 -     40346 CGATGTTTCCT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17850 11 +    216457 CGATGTTTCCT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17643 11 +     39636 CGATGTTTCCT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2011 11 +      5346 CCATGTTTCCT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40739 11 -    112038 CAGTGTTTCCT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6311 11 +     34062 CAGTGTTTCCT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341197 11 +  18827391 CAATGTTTCCT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7742 11 -     44032 CAATGTTTCCT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302522 11 - 135778131 CAATGTTTCCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406957 11 -   2368649 CAATGCTTCCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376835 11 - 200372422 CAATGCTTCCT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                382 11 -     84244 CAATGCTTCCT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805453 11 +  53390261 CAatgcttact
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           943 11 -      8242 CAATGCTTACT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40466 11 -     83289 ATGAATGCACT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112922 11 - 224834208 ATGAATGCACT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2497 11 +     87169 AAATTGTTCCT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    642972 11 -   1526836 AAATGTTTACT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3197 11 +     50838 CAATATTCACC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 37 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1788 11 +     36344 CAATGTTTACT
i Cuniculus_paca.CunPac_flattened_line_7025              I 37 C 0
s Dasypus_novemcinctus.JH564415.1                          2108328 11 -   2246927 CAATGCCGACA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290775 11 +  12879189 CAATGTTTACT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862910 11 -  20541912 CAATGCTCACT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662648 11 -   1390856 caaTGTTTACT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137433 11 -    198055 CAATGCTTACT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96663 11 -    115145 CAATATTTACA
i Dinomys_branickii.DinBra_scaffold_10381                I 37 C 0
s Dipodomys_ordii.KN672350.1                              18948529 11 -  37912305 CAATGGTtact
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3476 11 -     10735 CAATGGTTACT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8109 11 +     14636 CAATATTTACT
i Dolichotis_patagonum.DolPat_scaffold_80628             I 37 C 0
s Echinops_telfairi.JH980293.1                            62852104 10 - 111700974 -AGTGTATATT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4477 11 +     19438 CAATGCTTACT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105653 11 -  10337057 CAATGTATACT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29232 11 +    110024 ATGAATGCACT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11208 11 +     18970 ATGAATGCACT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914132 11 +  41312741 caatgcttact
i Enhydra_lutris.KZ291758.1                              C 0 I 189
s Eptesicus_fuscus.JH977646.1                             12576544 11 +  14770903 caATGCTCCCT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039636 11 -   4378816 caGTGCTTACT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373570 11 +  39960074 CAGTGCTTACT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410356 11 -    498745 caGTGCTTACT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260720 11 +  21539334 CAATGTTTCCT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12947 11 -     24895 TAATGTTTACT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40659 11 -     70999 TAATGTTTACT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84618 11 +    112731 TAATGTTTACT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41191 11 +     68309 TAATGTTTACT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51516 11 -     65740 TAATGTTTACT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22146 11 -     75513 TAATGTTTACT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46339 11 -     97555 TAATGTTTACT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3066 11 +     30972 TAATGTTTATT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40789 11 -     52037 TAATGTTTACT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57190 11 -    111500 TAATGTTTACT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244947 11 - 206538554 aaattgttCCT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114733 11 - 205367284 aaattgttCCT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25837 11 -     30238 AAATTGTTCCT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122806 11 -    137831 CAATGTTTACT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6346 11 +     22493 CAATGTTTACT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18398 11 -     32986 CAATGTTTACT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17260 11 +     18121 AAATGTTTATT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32131 11 -     36801 CAATGTTTATT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3623 11 -      8343 CAATGTTTCCT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252634 11 - 186649187 CAATGTTTCCT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11450 11 +     11903 CAATGTTTACT
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12874 11 -     40692 TAATGTTTACT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34275 11 +     49394 TAATGTTTACT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59144 11 -     66874 TAATGTTTACT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8017 11 -     42923 TAATGTTTACT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15017 11 -     53142 TAATGTTTACT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28982 11 -    327341 AAATTGTTCTT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925252 11 -  22651954 taatatttact
i Heterocephalus_glaber.JH602082.1                       I 37 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49022 11 +     49977 CAATGCTTACT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 4
s Hoolock_leuconedys.ctg274                                    140622 11 -    630532 CAATGTTTCCT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67656 11 +     83186 AAATTGTTCCT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69542 11 +    143317 CAATATTGACT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 37 C 0
s Hylobates_agilis.k141_1155965                               3657 11 +     12352 CAATGTTTCCT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10840 11 +     55766 CAATGTTTCCT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050436 11 + 191637585 CAATGTTTCCT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799314 11 +  11177569 CAATGTTTCCT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384975 11 +   7955117 CAATATTTGTT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     530 11 +     11955 CCATGTTTACT
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237381 11 +   9596543 GTGAGTGtgct
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41451 11 +    110728 CAATGTTTCCT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60019 11 -     65777 CAATGCTCACT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 14
s Lemur_catta.scaffold_24                                 14757665 11 +  30322482 TAATGTTTACT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2116 11 -     13097 CCATGTTTCCT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2067 11 +      5940 CCATGTTTCCT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1701 11 -      5717 CCATGTTTCCT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8317 11 -     11567 CAATGTTTCCT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9698 11 -     12945 CAATGTTTCCT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7194 11 +     29618 CAATGTTTACT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7191 11 +     31569 CAATGTTTACT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7201 11 +     24756 CAATGTTTACT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7200 11 +     16388 CAAGGTTTACT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811481 11 -   3914936 caaTGCTTAct
i Leptonychotes_weddellii.KB714746.1                     C 0 I 216
s Lepus_americanus.LepAme_scaffold_56121                     16096  9 +     24238 CAGTATTCA--
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 6
s Lophocebus_aterrimus.ctg367                               330824 11 -   1826925 CAATGTTTCCT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8560 11 +     19643 CAATGTTTACT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042221 11 -   6120653 CAATGTTTACT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078463 10 +  43346337 -AATGTATACT
i Loxodonta_africana.GL010049.1                          I 3 C 0
s Lycaon_pictus.CM007581.1                                41612852 11 +  59628241 CAATGCttact
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43141 11 -     61512 CAATGTTTCCT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370802 11 -  60120075 CAATGTTTCCT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23057 11 +     30207 CAATGTTTCCT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20160 11 -     24934 CAATGTTTCCT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23009 11 +     30527 CAATGTTTCCT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34199 11 -     50087 CAATGTTTCCT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43969 11 +     51645 CAATGTTTCCT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413138 11 - 187317192 CAATGTTTCCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397361 11 +  25927173 CAATGTTTCCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46525 11 -     62418 CAATGTTTCCT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23180 11 +     24253 CAATGTTTCCT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43001 11 +     59329 CAATGTTTCCT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268929 11 +    668171 CAATGTTTCCT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20115 11 +     21031 CAATGTTTCCT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  712 11 +     17132 CAATGTTTCCT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221441 11 -    270270 CAATGCTTACT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320212 11 +  24302211 CAATGTTTCCT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355044 11 -    752769 CAATGTTTCCT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671738 11 -    737560 CAATGCTtact
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219028 11 +    317179 CAATGCTtact
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499185 11 +  40650429 CAATGTTTGTT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148642 11 +    207569 CAATTCTTACT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24001 11 -     74585 CAATGCTTACT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 195
s Meriones_unguiculatus.MerUng_scaffold_7390                 46835 11 -    140813 ATGAATGCGCT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427482 11 +  29670104 ATGAATTCACT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8079 11 +     17804 CAATGTTCGCT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8863 11 -     12984 CAATGTTCGAT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16814 11 -     26561 CAATGTTCGCT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982807 11 +  93316391 CAATGTTTACT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43200 10 +    145209 -AGTGTATAGT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182858 11 +    200668 CAATGCTCACT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960627 11 +  27267610 ATGAATGCACT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360973 11 -   8254450 caGTGCTTact
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39874 11 -     48117 CAGTGCTTACT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20239 11 -     27822 CAATGTTTCCT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6488 11 +     27589 CAATGCTTACT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 220
s Mirza_zaza.k141_766280                                     50598 11 -     62432 CAATGTTTACT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177039  7 +    366855 CAATGCT----
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16736 11 -     63510 AAATTGTTCTT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          36888 11 +     47283 CAATGCTCACT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   4910 11 +      5579 TTGAATTCACT
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685613 11 + 129401213 TTGAATTCACT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39494931 11 + 130317789 TTGAATTCACT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80731 11 -     86153 TAATGTTTACT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14352945 11 +  14710649 caatgcttact
i Mustela_putorius.JH418006.1                            C 0 I 193
s Myotis_brandtii.KE162005.1                               9790933 11 +  10118263 CAATGCTCACT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385295 11 +   6019432 CAATGCTCACT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381115 11 +   4330536 CAATGCTCAct
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3674 11 +      3929 CAATGCTCACT
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117778 11 +    130748 CAATGCCTACT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26820 11 +     34575 CAGTGTTTCCT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467089  8 -  31847680 caaTGCtt---
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 214
s Noctilio_leporinus.NocLep_scaffold_7894                   125822 11 -    149072 CAATGCCTACT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51546 11 -    132029 CAATGTTTCCT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7641 11 -     16345 CAATGTTTCCT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13526 11 +     22201 CAATGTTTCCT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411810 11 -  22158432 CAATGTTTCCT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23924 11 -     54323 CAATGTTTCCT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196454 11 +   9404916 CAATGCttact
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634572 11 + 196305487 CAATGTTTACT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1330 11 -      3937 CAATGTTTACT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562811 11 - 199412804 CAATGTTTACT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549482  9 -   3988456 CAGTGTTCA--
i Ochotona_princeps.JH802162.1                           C 0 I 7
s Octodon_degus.JH651603.1                                11045705 11 -  11899542 CAATAGTTACT
i Octodon_degus.JH651603.1                               I 37 C 0
s Odobenus_rosmarus.KB229312.1                             1449686 11 +   2017862 caaTGCTTact
i Odobenus_rosmarus.KB229312.1                           C 0 I 210
s Ondatra_zibethicus.OndZib_scaffold_7387                    90993 11 -    140218 ATGAATGCACT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105423 11 +    107918 ATGAATGCACT
i Onychomys_torridus.OnyTor_scaffold_2487                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11568 11 -     14239 CAATGTATACT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107101949  9 - 174332312 CAGTATTCA--
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 6
s Otocyon_megalotis.JAEUCK010005147.1                        37491 11 +    559221 CAATGCttact
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37954 11 -     51505 CAATGTTTACT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350957 11 +   1103335 CAATGTTTACT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470639 11 - 189151597 CAATGTTTCCT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22657 11 -    230217 AAATTGTTCCT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18459983 11 -  18783137 aaattgttCCT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970703 11 +   8748460 aaattgttCCT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241052 11 - 183742232 CAATGTTTCCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7516 11 +     21308 CAATGTTTCCT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288555 11 -  20919399 CAATGTTTCCT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20171 11 -     27687 CAATGTTTCCT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13307 11 +     16796 CAATGTTTCCT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20117 11 -     23640 CAATGTTTCCT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13300 11 +     78924 AAATTGTTTTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24238 11 +     31479 TAATGTTTACT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16597 11 -     24908 TAATGTTTACT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37725 11 +     38305 CAATGCTTACT
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30165 11 -     56120 CAATATTTACT
i Petromus_typicus.PetTyp_scaffold_17301                 I 32 C 0
s Piliocolobus_badius.k141_2704958                             335 11 +     55023 CCATGTTTCCT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             336 11 +     40849 CCATGTTTCCT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252084 11 +  14605196 CCATGTTTCCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1058 11 +     22231 CAATGCTCACT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63086 11 +    207309 CAGCGTTTGCT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4180 11 -     25401 CAGCGTCTCCT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29921 11 +     58159 CAGCGTTTGCT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30197 11 +     63561 CAGCGTTTGCT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29960 11 +     51148 CAGCGTTTGCT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554927 11 -   4542175 CAGCGTCTCCT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29944 11 +     51125 CAGCGTTTGCT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6351 11 +     39866 CGATGTTTCCT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1436 11 -      9282 CGATGTTTCCT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40840 11 -     87950 CGATGTTTCCT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41233 11 -     88961 CGATGTTTCCT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5932 11 -     39403 CGATGTTTCCT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40884 11 +     87928 CGATGTTTCCT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5929 11 -     60166 CGATGTTTCCT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12865 11 -     67232 CGATGTTTCCT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40781 11 -     90634 CGATGTTTCCT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42249 11 +     89403 CGATGTTTCCT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175779 11 - 189387572 CAATGTTTCCT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190597 11 -   9816681 CAATGTTTCCT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25434 11 +     69807 CAATGTTTCCT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42629 11 -     80239 CAATGTTTCCT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980821 11 +   4620579 TAATGTTTACT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564289 11 -   2598838 CCATGTTTACT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1925 11 -      7103 CCATGTTTACT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2522 11 -     11706 CCATGTTTACT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6258 11 -     30655 CCTTGTTTACT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32583 11 +     46564 CCATGTTTACT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92854 11 -     98465 CCATGTTTACT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6491 11 +     35169 CCATGTTTACT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34379 11 +     52041 ATGAATGCGCT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50098 11 -     66298 CAATGCTTACt
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2721 11 -     18639 CAATGCTTACT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 191
s Pteropus_alecto.KB030862.1                               5839070 11 -  28871421 CAATGCTTACT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535636 11 -   4952924 CAATGCTTACT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097300 11 +  38429054 aaattgttCCT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24844 11 +     91421 CAATGTTTCCT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151337 11 -   7812017 CAATGTTTCCT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5714 11 +     72585 CAATGTTTCCT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020824 11 -  90668790 ATGAATGCACT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913032 11 +   3329780 GAATGCTTACT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26654 11 +     27361 CAATGTTTCCT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120021 11 + 195417433 CAATGTTTCCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234262 11 -   7961872 CAATGTTTCCT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73052 11 -    116970 CAATGCTTATT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2009 11 +     27962 CCATGTTTCCT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2017 11 +      6077 CCATGTTTCCT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2054 11 +      5971 CCATGTTTCCT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2108 11 +      5932 CCATGTTTCCT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               291 11 -      4390 CCATGTTTCCG
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389357 11 - 209938924 CCATGTTTCCT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2056 11 +      5979 CCATGTTTCCT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2404 11 -      4301 CCATGTTTCCT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236512 11 +   5703754 CAATGTTTCCT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6102 11 +     21866 CAATGTTTCCT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114261 11 +    313613 CAATGCTTACT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23161 11 +     27374 CAATGTTTCCT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26680 11 +     58920 CAATGTTTCCT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13176 11 -     45317 CAATGTTTCCT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20834 11 -     42441 CAATGTTTCCT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23514 11 -     29113 CAATGTTTCCT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26583 11 -     48123 CAATGTTTCCT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46921  7 +     77746 ----ACGCATT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856567 11 -   1910179 CAATGATTGCT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866543 11 +   3870691 CAATGTTTGTT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4720 11 -     97271 CAATACTTACT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629             123143 11 +    196729 AAGTTGTTCTT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389083 11 +   1523678 CAATGTTTCCT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11876 11 +     22964 CAATGCTTATT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 898 11 +      5583 CAATGCCTACT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189807 11 +    199430 CAATGCTTAGT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103761 11 -    539355 CAATGCTTAGT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5121 11 +      6850 AAATGTTTACT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5162 11 +     20590 AAATGTTTACT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351038 11 - 186847797 CAATGTTTCCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22494 11 -     33621 CAGTATTTACT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 32 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18021 11 -     31044 CAATACCTACT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477919 11 -    610378 CAATGCTCACT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18725 11 +     26378 CAATGTTTCCT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31389 11 -     78344 CAATGTTTCCT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18046 11 +     25722 CAATGTTTCCT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26271 11 -     62838 CAATGTTTCCT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26388 11 +     46913 CAATGTTTCCT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7196 11 -     28527 CAATGTTTCCT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28210 11 -     64340 CAATGTTTCCT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26247 11 -     63452 CAATGTTTCCT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7690 11 +     22490 CAATGTTTCCT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1118 11 -      6147 CAATGTTTCCT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8092 11 -     13050 CAATGTTTCCT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253331 11 -   6242583 CAATGTTTCCT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59082 11 +     59866 CAATGTTTCCT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832111 11 -   4065304 CCATGTTTGtt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6389 11 -     70247 CCATGTTTGTT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     448 11 -     21056 CAATGTTTACT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180065 11 +   5085361 CAATGCttact
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23466 11 -     30710 TAATGTTTACT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22373 11 -    147434 TAATGTTTACT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103213 11 -    112863 CAATGCTTACT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172317 11 -    224448 CAATATTTGTT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         26886 11 -     86975 CAATGCTTATT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 208
s Zapus_hudsonius.ZapHud_scaffold_230229                      1565 11 +      2695 GTGAATTTACC
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         245064  0 +  18517816 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786  8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3297 14 +     36723 ACA-------TTT--TCTA-C---------TCT
s Acinonyx_jubatus.LLWD01001279.1                           811048 12 +   1699592 ACA-------TTC--TTCA-C---------T--
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_21377                     18095 14 +     63021 AAA-------TTT--TCTA-C---------ATT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413561 15 +  29979442 aca-------ttt-tttta-t---------tct
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213671 14 +    347723 ata-------ttt--ttta-t---------tct
i Ailurus_fulgens.LNAC01001112.1                         I 215 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16205 14 -     61208 ACAT------TTT--T-TT-G---------ATT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45703 14 +     53615 ACA-------TTT--TCTA-C---------TCT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41643 14 +     44087 ACA-------TTT--TCTA-C---------TCT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14283 14 -     21945 ACA-------TTT--TCTA-C---------TCT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15959 14 +     32033 ACA-------TTT--TCTA-C---------TCT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70407 14 -     84148 ACA-------TTT--TCTG-C---------TCT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42640 14 -     78289 ACA-------TTT--TCTG-C---------TCT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42086 14 +     55831 ACA-------TTT--TCTG-C---------TCT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40527 14 -     64179 ACA-------TTT--TCTG-C---------TCT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22174 14 -     24835 ACA-------TTT--TCTG-C---------TCT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39157 14 +     45454 ACA-------TTT--TCTG-C---------TCT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44855 14 +     70886 ACA-------TTT--TCTG-C---------TCT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6980 14 +     30854 ACA-------TTT--TCTG-C---------TCT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31119 14 +     42133 ACA-------TTT--TCTG-C---------TCT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174897 14 -    412891 ACA-------TTT--TCTG-T---------TTT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48929 14 -     65372 ACA-------TTT--TCTA-C---------TCT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42676 14 +     43593 ACA-------TTT--TCTA-C---------TCT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670689 14 +   5030052 ACA-------TTT--TCTA-C---------TCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22331 14 -     23494 ACA-------TTT--TCTA-C---------TCT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7467 14 +      8415 ACA-------TTT--TCTA-C---------TCT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14244 12 -     32367 ACA-------TTT--T--T-C---------TCT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3183 14 -     15198 ACA-------TTT--TCTG-T---------TTT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272919 14 +  21539123 GCA-------TTT--TCTA-C---------TCT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9086 14 +     48076 GCA-------TTT--TCTA-C---------TCT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4223 14 -     28759 GCA-------TTT--TCTA-C---------TCT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31776 14 +     44353 GCA-------TTT--TCTA-C---------TCT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47147 14 -     71267 GCA-------TTT--TCTA-C---------TCT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21206 14 -     33135 GCA-------TTT--TCTA-C---------TCT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4416 14 +     11645 ATG-------TTT--TCTA-C---------TTT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4422 14 -     19611 ATG-------TTT--TCTA-C---------TTT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6110 14 +     28062 ACA-------TTT--TCTA-C---------TCT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41404 14 -     91139 ACA-------TTT--TCTA-C---------TCT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18930 14 +     95584 ACA-------TTT--TCTA-C---------TCT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18843 14 +    119600 ACA-------TTT--TCTA-C---------TCT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8318 14 +     18648 ACA-------TTT--TATA-C---------TCT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7979 14 -     13885 ACA-------TTT--TATA-C---------TCT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16679 14 +     17162 ACA-------TTT--TATA-C---------TCT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451634 14 + 189096842 ACA-------TTT--TATA-C---------TCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17927 14 -     18408 ACA-------TTT--TATA-C---------TCT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503594 13 +  60362399 ACA--------TT--TTTA-T---------TCT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7230 13 -     23171 ACA--------TT--TTTA-T---------TCT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220573 13 +   9314153 aca--------tt--ttta-t---------tct
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613708 13 +  59632846 aca--------tt--ttta-t---------tct
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105289 13 -  63665305 aca--------tt--ttta-t---------tct
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268440 11 +    496798 ACA-------CTT--TCCA-C------------
i Carlito_syrichta.NW_007259797.1                        C 0 I 3
s Carollia_perspicillata.CarPer_scaffold_170178               3475 14 +      5315 ACA-------TTT--TCTG-T---------TTT
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994174 14 +  23392119 aca-------ttt--ttta-c---------ttt
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997616 14 +  23407841 aca-------ttt--ttta-c---------ttt
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60717 14 -     66877 ACA-------TTT--TTTA-C---------TTT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3211 14 -     12580 ACA-------TTT--TATA-C---------TCT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41097 14 +     53515 ACA-------TTT--TATA-C---------TCT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369303 14 -  26074798 GCA-------TGT--TCTA-C---------CCT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6192 14 -     34880 GCA-------TGT--TCTA-C---------CCT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65287 14 -     89041 GCA-------TGT--TCTA-C---------CCT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_72622                           1613 23 -      1636 ACA-------CTT--TCTA-CTTTTTTTTTTTT
i Cephalopachus_bancanus.k141_72622                      C 0 N 0
s Ceratotherium_simum.JH767749.1                          15490367 14 -  27778364 ACA-------TTT--TCTA-C---------TCT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17200 14 +     27315 ACA-------TTT--TCTA-C---------TCT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                138882 14 -   4669795 ACA-------TTT--TCTA-C---------TCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42622 14 +     47900 ACA-------TTT--TCTA-C---------TCT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42455 14 -     44860 ACA-------TTT--TCTA-C---------TCT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42438 14 -    148725 ACA-------TTT--TCTA-C---------TCT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9695 14 -     17524 ACA-------TTT--TCTA-C---------TCT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25417 14 -     34525 ACA-------TTT--TCTA-C---------TCT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29894 14 -     45857 ACA-------TTT--TCTA-C---------TCT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23386 14 +     70610 ACA-------TTT--TCTA-C---------TCT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20311 14 +     36323 ACA-------TTT--TCTA-C---------TCT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11010 14 -     19938 ACA-------TTT--TCTA-C---------TAT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28850 14 -     33796 ATG-------TTT--TCTA-C---------TCT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3378  2 -     15404 -------------------------------CT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7193 14 -     32913 ACA-------TTT--TCTA-C---------TTT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17606 14 -     40346 ACA-------TTT--TCTA-C---------TTT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17861 14 +    216457 ACA-------TTT--TCTA-C---------TTT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17654 14 +     39636 ACA-------TTT--TCTA-C---------TTT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2022 14 +      5346 ACA-------TTT--TCTA-C---------TCT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40750 14 -    112038 ACA-------TTT--TCTA-C---------TCT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6322 14 +     34062 ACA-------TTT--TCTG-C---------TCT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341208 14 +  18827391 ACA-------TTT--TCTA-C---------TCT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7753 14 -     44032 ACA-------TTT--TCTA-C---------TCT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302533 14 - 135778131 ACA-------TTT--TCTA-C---------TCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406968 14 -   2368649 ACA-------TTT--TCTA-C---------TCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376846 14 - 200372422 ACA-------TTT--TCTA-C---------TCT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                393 14 -     84244 ACA-------TTT--TCTA-C---------TCT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805464 15 +  53390261 aat-------ttt-tttaa-c---------tcT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           954 14 -      8242 ACA-------TTT--TCTA-C---------TTT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40477 13 -     83289 -AA-------TTT--TCTG-C---------ACC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213112933 21 - 224834208 GAATTATGGATTT--TCTA-C---------ATT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2508 13 +     87169 ACA-------TTTT-TTTA-C---------T--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    642983 14 -   1526836 ACA-------TTT--TCTA-T---------TCT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3208 14 +     50838 ACA-------TTT--TCTA-C---------TTT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1799 14 +     36344 ATA-------TTT--TTTA-C---------TTT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108339 14 -   2246927 ACA-------TTT--TCTA-C---------TAT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290786 14 +  12879189 ACA-------TTT--TCTA-C---------TCC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862921 14 -  20541912 ACA-------TGT--TCTG-T---------CTT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662659 14 -   1390856 ACA-------TTT--TCTA-C---------TCt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137444 14 -    198055 ACA-------TTT--TCTA-T---------TCT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96674 14 -    115145 ACA-------TTT--TCTA-C---------TTT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948540  8 -  37912305 aca-------ttt--tc----------------
i Dipodomys_ordii.KN672350.1                             C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_89095                   3487  8 -     10735 ACA-------TTT--TC----------------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 3
s Dolichotis_patagonum.DolPat_scaffold_80628                  8120 14 +     14636 ACA-------TTT--TTTA-C---------TTT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852114 14 - 111700974 ACA-------TTT--TCTA-C---------TAT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4488 14 +     19438 ACA-------TTT--TCTG-C---------Tct
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105664 11 -  10337057 ATA-------T-----TCA-C---------TAT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29243 14 +    110024 GAA-------TTT--TCTA-C---------ACT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11219 14 +     18970 GAA-------TTT--TCTA-C---------ATT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914332 14 +  41312741 acc-------ttt--ttta-t---------tct
i Enhydra_lutris.KZ291758.1                              I 189 C 0
s Eptesicus_fuscus.JH977646.1                             12576555 14 +  14770903 ATA-------TTT--TCTA-C---------TTg
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039647 14 -   4378816 ACA-------TTT--CCTA-C---------TCT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373581 14 +  39960074 ACA-------TTT--CCTA-C---------TCT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410367 14 -    498745 ACA-------TTT--CCTA-C---------TCT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260731 14 +  21539334 ACA-------TTT--TCTA-C---------TCT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12958 14 -     24895 ATG-------TTT--TCTA-C---------TCT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40670 14 -     70999 ATG-------TTT--TCTA-C---------TCT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84629 14 +    112731 ATG-------TTT--TCTA-C---------TCT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41202 14 +     68309 ATG-------TTT--TCTA-C---------TCT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51527 14 -     65740 ATG-------TTT--TCTA-C---------TCT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22157 14 -     75513 ATG-------TTT--TCTA-C---------TCT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46350 14 -     97555 ATG-------TTT--TCTA-C---------TCT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3077 14 +     30972 ATG-------TTT--TCTA-C---------TCT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40800 14 -     52037 ATG-------TTT--TCTA-C---------TCT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57201 14 -    111500 ATG-------TTT--TCTA-C---------TCT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244958 12 - 206538554 ACA-------TTC--TTCA-C---------T--
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                          185114744 12 - 205367284 ACA-------TTC--TTCA-C---------T--
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_31944                 25848 12 -     30238 ACA-------TTC--TTCA-C---------T--
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 1
s Galago_moholi.ctg3793                                     122817 14 -    137831 ATG-------TTT--TCTA-C---------CTG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6357 14 +     22493 ATG-------TTT--TCTA-C---------CTG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18409 14 -     32986 ATG-------TTT--TCTA-C---------CTG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17271 14 +     18121 ACA-------TTT--TCTC-C---------TCT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32142 14 -     36801 TCA-------TTT--CAAA-C---------TCT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3634 14 -      8343 ACA-------TTT--TCTA-C---------TCT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252645 14 - 186649187 ACA-------TTT--TCTA-C---------TCT
i Gorilla_gorilla.LT578341.1                             C 0 I 15
s Graphiurus_murinus.GraMur_scaffold_90206                   11461 14 +     11903 GCA-------TTT--TAAA-C---------TCT
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          12885 14 -     40692 ATG-------TTT--TCTA-C---------TCT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34286 14 +     49394 ATG-------TTT--TCTA-C---------TCT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59155 14 -     66874 ATG-------TTT--TCTA-C---------TCT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8028 14 -     42923 ATG-------TTT--TCTA-C---------TCT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15028 14 -     53142 ATG-------TTT--TCTA-C---------TCT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                28993 14 -    327341 CTA-------TTTTTTTTA-C---------T--
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Heterocephalus_glaber.JH602082.1                         1925263 12 -  22651954 aca-------tt--ttcta-c---------t--
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49037 14 +     49977 ACA-------TTT--TATA-C---------TCT
i Hipposideros_galeritus.HipGal_scaffold_23202           I 4 C 0
s Hoolock_leuconedys.ctg274                                    140633 14 -    630532 ACA-------TTT--TCTA-C---------TCT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67667 13 +     83186 ACA-------TTTT-TTTA-C---------T--
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69553 15 +    143317 ACA-------TTT--TTAATC---------TTT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3668 14 +     12352 ACA-------TTT--TCTA-C---------TCT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10851 14 +     55766 ACA-------TTT--TCTA-C---------TCT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050447 14 + 191637585 ACA-------TTT--TCTA-C---------TCT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799325 14 +  11177569 ACA-------TTT--TCTA-C---------TCT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     384986 14 +   7955117 ACA-------TTT--CTTA-C---------Tct
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 12
s Indri_indri.k141_2415743                                     541 14 +     11955 ATG-------TTT--TCTA-C---------TCT
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237392 14 +   9596543 gca------tttt--t-aa-a---------att
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41462 14 +    110728 GCA-------TTT--TCTG-C---------TCT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    29271 13 -     49555 ATA-------TGT--TCTA-C---------T-T
i Lasiurus_borealis.LasBor_scaffold_26245                I 184 I 16
s Lemur_catta.scaffold_24                                 14757676 14 +  30322482 ATG-------TTT--TCTA-C---------TCT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2127 14 -     13097 ATA-------TTT--TCTA-C---------TCT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2078 14 +      5940 ATA-------TTT--TCTA-C---------TCT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1712 14 -      5717 ATA-------TTT--TCTA-C---------TCT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8328 14 -     11567 ACA-------TTT--TACA-C---------TCT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9709 14 -     12945 ACA-------TTT--TACA-C---------TCT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7205 14 +     29618 AAG-------TTT--TCTA-C---------TCT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7202 14 +     31569 ATG-------TTT--TCTA-C---------TCT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7212 14 +     24756 ATG-------TTT--TCTA-C---------TCT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7211 14 +     16388 ATG-------TTT--TCTA-C---------TCT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811708 14 -   3914936 aca-------ttt--ttta-t---------tct
i Leptonychotes_weddellii.KB714746.1                     I 216 C 0
s Lophocebus_aterrimus.ctg367                               330835 14 -   1826925 ACA-------TTT--TCTA-C---------TCT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8571 14 +     19643 ACA-------TTT--TCTA-C---------CTG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042232 14 -   6120653 ACA-------TTT--TCTA-C---------CTG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078473 14 +  43346337 ACA-------TTT--TCTA-C---------TAT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41612863 13 +  59628241 aca--------tt--ttta-t---------tct
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43152 14 -     61512 ACA-------TTT--TCTA-C---------TCT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370813 14 -  60120075 ACA-------TTT--TCTA-C---------TCT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23068 14 +     30207 ACA-------TTT--TCTA-C---------TCT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20171 14 -     24934 ACA-------TTT--TCTA-C---------TCT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23020 14 +     30527 ACA-------TTT--TCTA-C---------TCT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34210 14 -     50087 ACA-------TTT--TCTA-C---------TCT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43980 14 +     51645 ATA-------TTT--TCTA-C---------TCT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413149 14 - 187317192 ACA-------TTG--TCTA-C---------TCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397372 14 +  25927173 ACA-------TTT--TCTA-C---------TCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46536 14 -     62418 ACA-------TTT--TCTA-C---------TCT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23191 14 +     24253 ACA-------TTT--TCTA-C---------TCT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43012 14 +     59329 ACA-------TTT--TCTA-C---------TCT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268940 14 +    668171 ACA-------TTT--TCTA-C---------TCT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20126 14 +     21031 ACA-------TTT--TCTA-C---------TCT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  723 14 +     17132 ACA-------TTT--TCTA-C---------TCT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221452 14 -    270270 GCA-------TTT--TCTA-C---------TCT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320223 14 +  24302211 ACA-------TTT--TCTA-C---------TCT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355055 14 -    752769 ACA-------TTT--TCTA-C---------TCT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671749 14 -    737560 aca-------ttt--tcta-t---------ttt
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219039 14 +    317179 aca-------ttt--tcta-t---------ttt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499196 14 +  40650429 ACA-------TTT--TCTA-C---------Tct
i Marmota_marmota.CZRN01000018.1                         C 0 I 12
s Megaderma_lyra.MegLyr_scaffold_4542                       148653 14 +    207569 AGA-------TTT--TTCA-G---------TCT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24207 15 -     74585 ACA-------TTTT-TTTA-T---------TCT
i Mellivora_capensis.MelCap_flattened_line_19308         I 195 I 5
s Meriones_unguiculatus.MerUng_scaffold_7390                 46846 14 -    140813 AAA-------TTT--TCTA-C---------ATT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427493 14 +  29670104 GAC-------TTT--TCTA-C---------ATT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8090 14 +     17804 ACA-------TTT--TATA-C---------TCT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8874 14 -     12984 ACA-------TTT--TATA-C---------TCT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16825 14 -     26561 ACA-------TTT--TATA-C---------TCT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982818 14 +  93316391 ATG-------TTT--TCTA-C---------TCT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43210 14 +    145209 ATA-------TTT--TCTA-C---------TAT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182869 14 +    200668 ACA-------TTT--TCTG-T---------TTT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960638 14 +  27267610 GAA-------TTT--TCTA-C---------ATT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6360984 14 -   8254450 gta-------ttt--tcta-c---------ttt
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39885 14 -     48117 GTA-------TTT--TCTA-C---------TTT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20250 14 -     27822 ACA-------TTT--TCTA-C---------TCT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6719 14 +     27589 ACA-------TTT--TTTA-T---------TCT
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 220 C 0
s Mirza_zaza.k141_766280                                     50609 14 -     62432 ATG-------TTT--TCTC-T---------TCT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16747 13 -     63510 CTA-------TTTT-TTTA-C---------T--
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 1
s Murina_feae.MurFea_scaffold_17764                          36899 14 +     47283 ATA-------TTT--TCTA-C---------CTT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   4921 14 +      5579 AAA-------TTT--Tctg-c---------att
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685624 14 + 129401213 AAA-------TTT--TCTG-C---------att
i Mus_musculus.chr8                                      C 0 I 13
s Mus_spretus.CM004101.1                                  39494942 14 + 130317789 AAA-------Ttt--tctg-c---------att
i Mus_spretus.CM004101.1                                 C 0 I 13
s Muscardinus_avellanarius.MusAve_scaffold_12866             80742 13 -     86153 -CA-------TTT--TAAA-C---------TCT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353149 14 +  14710649 aca-------ttt--ttta-t---------tct
i Mustela_putorius.JH418006.1                            I 193 I 209
s Myotis_brandtii.KE162005.1                               9790944 14 +  10118263 ATA-------TTT--TCTA-C---------TGt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385306 14 +   6019432 ATG-------TTT--TCTA-c---------ttt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381126 14 +   4330536 ata-------ttt--tcta-c---------ttt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3685 14 +      3929 ATG-------TTT--TCTA-C---------TTT
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117789 14 +    130748 ATA-------TTT--TATA-G---------TAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26831 14 +     34575 GCA-------TTT--TCTA-C---------TCT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467311 14 -  31847680 aca-------tTT--TCTA-T---------TCT
i Neomonachus_schauinslandi.NINY01007730.1               I 214 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125833 14 -    149072 ACA-------TTT--TCTA-C---------TTT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51557 14 -    132029 ACA-------TTT--TCTA-C---------TCT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7652 14 -     16345 ACA-------TTT--TCTA-C---------TCT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13537 14 +     22201 ACA-------TTT--TCTA-C---------TCT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411821 14 -  22158432 ACA-------TTT--TCTA-C---------TCT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23935 14 -     54323 ACA-------TTT--TCTA-C---------TCT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196465 13 +   9404916 aca--------tt--ttta-t---------tct
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634583 14 + 196305487 ACA-------TTT--TCTA-C---------CTG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1341 14 -      3937 ACA-------TTT--TCTA-C---------CTG
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562822 14 - 199412804 ACA-------TTT--TCTA-C---------CTG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11045716 14 -  11899542 ACA-------TTT--TCTA-C---------TTT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1449907 14 +   2017862 aca-------ttt--ttta-t---------tct
i Odobenus_rosmarus.KB229312.1                           I 210 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91004 14 -    140218 GAA-------TTT--CATA-C---------ATT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105434 14 +    107918 AAA-------TTT--TCTT-C---------ATT
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11579 14 -     14239 ATA-------TAT--TCTA-C---------TAT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37502 13 +    559221 aca--------tt--ttta-t---------tct
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        37965 14 -     51505 ATG-------TTT--TCTA-C---------CTG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350968 14 +   1103335 ATG-------TTT--TCTA-C---------CTG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470650 14 - 189151597 ACA-------TTT--TCTA-C---------TCT
i Pan_troglodytes.CM009242.2                             C 0 I 24
s Panthera_onca.PanOnc_flattened_line_3271                   22668 12 -    230217 ACA-------TTC--TTCA-C---------T--
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                              18459994 12 -  18783137 ACA-------TTC--TTCA-C---------T--
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               3970714 12 +   8748460 ACA-------TTC--TTCA-C---------T--
i Panthera_tigris.KE722367.1                             C 0 I 1
s Papio_anubis.CM001495.2                                   241063 14 - 183742232 ACA-------TTT--TCTA-C---------TCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7527 14 +     21308 ACA-------TTT--TCTA-C---------TCT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288566 14 -  20919399 ACA-------TTT--TCTA-C---------TCT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20182 14 -     27687 ACA-------TTT--TCTA-C---------TCT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13318 14 +     16796 ACA-------TTT--TCTA-C---------TCT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20128 14 -     23640 ACA-------TTT--TCTA-C---------TCT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13311 12 +     78924 ATG-------TTT--TTTA-C---------T--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_1921260                          24249 14 +     31479 ACG-------TTT--CTTA-C---------CTG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16608 14 -     24908 ACG-------TTT--CTTA-C---------CTG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37736  8 +     38305 GCA-------TTT--CC----------------
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 I 7
s Peromyscus_maniculatus.KI615324.1                         245064 14 +  18517816 GAA-------TTT--TCTA-C---------ATT
i Peromyscus_maniculatus.KI615324.1                      C 0 I 2
s Petromus_typicus.PetTyp_scaffold_17301                     30176 13 -     56120 ACA-------TT---TCTA-C---------TTA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 11
s Piliocolobus_badius.k141_2704958                             346 14 +     55023 ACA-------TTT--TCTA-C---------TCT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             347 14 +     40849 ACA-------TTT--TCTA-C---------TCT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252095 14 +  14605196 ACA-------TTT--TCTA-C---------TCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1069 14 +     22231 ATA-------TTT--TCTA-C---------TTG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63097 14 +    207309 ACA-------TTT--TCTA-C---------TCT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4191 14 -     25401 ACA-------TTT--TCTG-C---------TCT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29932 14 +     58159 ACA-------TTT--TCTA-C---------TCT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30208 14 +     63561 ACA-------TTT--TCTA-C---------TCT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29971 14 +     51148 ACA-------TTT--TCTA-C---------TCT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554938 14 -   4542175 ACA-------TTT--TCTG-C---------TCT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29955 14 +     51125 ACA-------TTT--TCTA-C---------TCT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6362 14 +     39866 ACA-------TTT--TCTA-C---------TCT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1447 14 -      9282 ACA-------TTT--TCTA-C---------TCT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40851 14 -     87950 ACA-------TTT--TCTA-C---------TCT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41244 14 -     88961 ACA-------TTT--TCTA-C---------TCT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5943 14 -     39403 ACA-------TTT--TCTA-C---------TCT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40895 14 +     87928 ACA-------TTT--TCTA-C---------TCT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5940 14 -     60166 ACA-------TTT--TCTA-C---------TCT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12876 14 -     67232 ACA-------TTT--TCTA-C---------TCT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40792 14 -     90634 ACA-------TTT--TCTA-C---------TCT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42260 14 +     89403 ACA-------TTT--TCTA-C---------TCT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175790 14 - 189387572 ACA-------TTT--TCTA-C---------TCT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190608 14 -   9816681 ACA-------TTT--TCTA-C---------TCT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25445 14 +     69807 GCA-------TTT--TCTA-C---------TCT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42640 14 -     80239 GCA-------TTT--TCTA-C---------TCT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980832 14 +   4620579 ATG-------TTT--TCTA-C---------TCT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564300 14 -   2598838 ATG-------TTT--Tcta-c---------ttt
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1936 14 -      7103 ATG-------TTT--TCTA-C---------TTT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2533 14 -     11706 ATG-------TTT--TCTA-C---------TTT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6269 14 -     30655 ATG-------TTT--TCTA-C---------TTT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32594 14 +     46564 ATG-------TTT--TCTA-C---------TTT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92865 14 -     98465 ATG-------TTT--TCTA-C---------TTT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6502 14 +     35169 ATG-------TTT--TCTA-C---------TTT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34390 14 +     52041 AAA-------TTT--TCTA-C---------ATT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50109 14 -     66298 aca-------ttt--tctg-c---------ttt
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2923 14 -     18639 ACA-------TTT--TTTA-T---------TCT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 191 C 0
s Pteropus_alecto.KB030862.1                               5839081 14 -  28871421 ACA-------TTT--TCTA-C---------TCT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535647 14 -   4952924 ACA-------TTT--TCTA-C---------TCT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097311 12 +  38429054 ACA-------TTC--TTCA-C---------T--
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             24855 14 +     91421 GCA-------TTT--TCTA-C---------TCT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151348 14 -   7812017 GCA-------TTT--TCTA-C---------TCT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5725 14 +     72585 GCA-------TTT--TCTA-C---------TCT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020835 14 -  90668790 CAG-------TTT--tcta-t---------att
i Rattus_norvegicus.chr16                                C 0 I 13
s Rhinolophus_sinicus.LVEH01000134.1                       2913043 14 +   3329780 ACA-------TTT--TCTA-C---------TCC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26665 14 +     27361 GCA-------TTT--TCTA-C---------TCT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120032 14 + 195417433 GCA-------TTT--TCTA-C---------TCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234273 14 -   7961872 GCA-------TTT--TCTA-C---------TCT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73063 14 -    116970 ACA-------TCT--TCTA-C---------TCT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2020 14 +     27962 ACA-------TTT--TCTA-C---------TCT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2028 14 +      6077 ACA-------TTT--TCTA-C---------TCT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2065 14 +      5971 ACA-------TTT--TCTA-C---------TCT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2119 14 +      5932 ACA-------TTT--TCTA-C---------TCT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               302 14 -      4390 ACA-------TTT--TCTA-C---------TCT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389368 14 - 209938924 ACA-------TTT--TCTA-C---------TCT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2067 14 +      5979 ACA-------TTT--TCTA-C---------TCT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2415 14 -      4301 ACA-------TTT--TCTA-C---------TCT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236523 14 +   5703754 ACA-------TGT--TCTA-C---------TCT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6113 14 +     21866 ACA-------TGT--TCTA-C---------TCT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114272 12 +    313613 ATT-------TTTT-T----C---------TCT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23172 14 +     27374 GCA-------TTT--TCTA-C---------TCT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26691 14 +     58920 GCA-------TTT--TCTA-C---------TCT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13187 14 -     45317 GCA-------TTT--TCTA-C---------TCT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20845 14 -     42441 GCA-------TTT--TCTA-C---------TCT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23525 14 -     29113 GCA-------TTT--TCTA-C---------TCT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26594 14 -     48123 GCA-------TTT--TCTA-C---------TCT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46928 14 +     77746 AAA-------TTT--TCTA-C---------ATT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 13
s Solenodon_paradoxus.SolPar_flattened_line_126            1856578 14 -   1910179 ACA-------TTT--TCTA-C---------TCT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866554 14 +   3870691 ACA-------TTT--CTTA-C---------TCT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4732 13 -     97271 -TA-------TTT--TTTA-T---------TCT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123154 13 +    196729 CTA-------TTTT-TTTC-T---------T--
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Symphalangus_syndactylus.tarseq_199                       389094 14 +   1523678 ACA-------TTT--TCTA-C---------TCT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11887 14 +     22964 ATA-------TTT--TCTA-C---------TTT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 909 14 +      5583 ACA-------TTT--TATA-G---------TAT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189818 14 +    199430 ATG-------TTT--TCTA-C---------TCT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103772 14 -    539355 ATG-------TTT--TCTA-C---------TCT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5132 14 +      6850 ACA-------CTT--TCCA-C---------TTT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5173 14 +     20590 ACA-------CTT--TCCA-C---------TTT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351049 14 - 186847797 ACA-------TTT--TCTA-C---------TCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22505 14 -     33621 ACA-------TTT--TCTA-C---------TTT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18032 14 -     31044 ACA-------TTT--TCTA-C---------TAT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477930 14 -    610378 ACA-------TTT--TCTG-T---------TTT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18736 14 +     26378 GCA-------TTT--TCTA-C---------TCT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31400 14 -     78344 GCA-------TTT--TCTA-C---------TCT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18057 14 +     25722 GCA-------TTT--TCTA-C---------TCT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26282 14 -     62838 GCA-------TTT--TCTA-C---------TCT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26399 14 +     46913 GCA-------TTT--TCTA-C---------TCT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7207 14 -     28527 GCA-------TTT--TCTA-C---------TCT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28221 14 -     64340 GCA-------TTT--TCTA-C---------TCT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26258 14 -     63452 GCA-------TTT--TCTA-C---------TCT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7701 14 +     22490 GCA-------TTT--TCTA-C---------TCT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1129 14 -      6147 GCA-------TTT--TCTA-C---------TCT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8103 14 -     13050 GCA-------TTT--TCTA-C---------TCT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253342 14 -   6242583 GCA-------TTT--TCTA-C---------TCT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59093 14 +     59866 GCA-------TTT--TCTA-C---------TCT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832122  8 -   4065304 aca-------ttt--tc----------------
i Tupaia_chinensis.KB320699.1                            C 0 I 2
s Tupaia_tana.TupTan_flattened_line_394                       6400  8 -     70247 ACA-------TTT--TC----------------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_46687                     459 14 -     21056 ACG-------TTT--TTGA-C---------ACT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180076 13 +   5085361 aca-------ttt---tta-t---------tct
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23477 14 -     30710 ATG-------TTT--TCTA-C---------TCT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22384 14 -    147434 ATG-------TTT--TCTA-C---------TCT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103224 13 -    112863 ACA--------TT--TTTA-T---------TCT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172328 14 -    224448 ATA-------TTT--TCTA-C---------TTT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27105 14 -     86975 ACA-------TTT--TTTA-T---------TCT
i Zalophus_californianus.ZalCal_flattened_line_17732     I 208 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1576 15 +      2695 ATAT------TTT--TCTA-G---------ATT
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Lepus_americanus.LepAme_scaffold_56121                     16105  6 +     24238 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107101958  6 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2549491  7 -   3988456 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786  8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 177046  0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3311 15 +     36723 T---CA-------T--ATGTCT-----CATAT
s Acinonyx_jubatus.LLWD01001279.1                           811061 14 +   1699592 ----CA-------T--AAGTTT-----TACAT
i Acinonyx_jubatus.LLWD01001279.1                        I 1 I 1
s Acomys_cahirinus.AcoCah_scaffold_21377                     18109  6 +     63021 TA--TT-------T--A---------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 10
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413576 17 +  29979442 t-aaca-------t--ATGTTT-----TACAT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                            213685 17 +    347723 t-aaca-------t--atgttt-----tatac
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allactaga_bullata.AllBul_scaffold_20030                    16219  6 -     61208 T--GCA-------T--A---------------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 3
s Allenopithecus_nigroviridis.k141_3755588                   45717 15 +     53615 T---CA-------T--ATGTCT-----CATAT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41657 15 +     44087 T---CA-------T--ATGTCT-----CATCT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14297 15 -     21945 T---CA-------T--ATGTCT-----CATCT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15973 15 +     32033 T---CA-------T--ATGTCT-----CATCT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70421 15 -     84148 T---CG-------T--ATGTCC-----CATAT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42654 15 -     78289 T---CA-------T--ATGTCC-----CATAT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42100 15 +     55831 T---CG-------T--ATGTCC-----CATAT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40541 15 -     64179 T---CG-------T--ATGTCC-----CATAT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22188 15 -     24835 T---CA-------T--ATGTCC-----CATAT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39171 15 +     45454 T---CG-------T--ATGTCC-----CATAT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44869 15 +     70886 T---CG-------T--ATGTCC-----CATAC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              6994 15 +     30854 T---CA-------T--ATGTCC-----CATAT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31133 15 +     42133 T---CA-------T--ATGTCC-----CATAT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174911 16 -    412891 TA--CA-------T--ATGTTT-----GATTT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48943 15 -     65372 T---CG-------T--ATGTCC-----CATAT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42690 15 +     43593 T---CG-------T--ATGTCC-----CATAT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670703 15 +   5030052 T---CG-------T--ATGTCC-----CATAT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22345 15 -     23494 T---TG-------T--ATGTCC-----CATAT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7481 15 +      8415 T---TG-------T--ATGTCC-----CATAT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14256  5 -     32367 TA---C-------C--A---------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 10
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3197 16 -     15198 TA--CA-------T--CTGTTT-----GATTT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272933 15 +  21539123 T---CG-------T--ATGTCC-----CATAT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9100 15 +     48076 T---CG-------T--ATGTCC-----CATAT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4237 15 -     28759 T---CG-------T--ATGTCC-----CATAT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31790 15 +     44353 T---CG-------T--ATGTCC-----CATAT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47161 15 -     71267 T---CG-------T--ATGTCC-----CATAT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21220 15 -     33135 T---CG-------T--ATGTCC-----CATAT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4430 16 +     11645 T--GTA-------T--GTGTTT-----TATAC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4436 16 -     19611 T--GTA-------T--GTGTTT-----TATAC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6124 15 +     28062 T---CG-------T--ATGTCT-----CATAT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41418 15 -     91139 T---CG-------T--ATGTCT-----CATAT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18944 15 +     95584 T---CG-------T--ATGTCT-----CATAT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18857 15 +    119600 T---CA-------T--ATGTCT-----CATAT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8332 15 +     18648 T---CA-------T--ATGTCC-----CATAT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              7993 15 -     13885 T---CG-------T--ATGTCC-----TATAT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16693 15 +     17162 T---CA-------T--ATGTCC-----CATAT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451648 15 + 189096842 T---CA-------T--ATGTCC-----CATAT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17941 15 -     18408 T---CA-------T--ATGTCC-----CATAT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503607 15 +  60362399 TA-ACA-------T--A--TTT-----TACAT
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7243 15 -     23171 TA-ACA-------T--A--TTT-----TACAT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                          220586 15 +   9314153 t-aaca-------t--a--ttt-----tacat
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            41613721 15 +  59632846 t-aaca-------t--a--ttt-----tacat
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            45105302 15 -  63665305 t-aaca-------t--a--ttt-----tacat
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Carlito_syrichta.NW_007259797.1                           268454 18 +    496798 TACGTA-------T--GTTTTA-----TACAT
i Carlito_syrichta.NW_007259797.1                        I 3 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3489 16 +      5315 TA--CA-------T--ATGTTT-----GATTT
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994188 13 +  23392119 t--acacATGTGTT--A---------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 3
s Cavia_porcellus.DS562891.1                               4997630 13 +  23407841 t--acacATGTGTT--A---------------
i Cavia_porcellus.DS562891.1                             C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_23560                       60731 13 -     66877 TA--CACATGTGTT--A---------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 3
s Cebuella_niveiventris.k141_592277                           3225 15 -     12580 T---CA-------T--ATGTCC-----CATAT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41111 15 +     53515 T---CA-------T--ATGTCC-----CATAT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369317 15 -  26074798 T---CA-------T--ATGTCC-----CATAG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6206 15 -     34880 T---CA-------T--ATGTCC-----CATAG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65301 15 -     89041 T---CA-------T--ATGTCC-----CATAG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          431 18 -      5494 TATGTA-------T--GTTTTA-----TACAT
i Cephalopachus_bancanus.k141_1689090                    N 0 C 0
s Ceratotherium_simum.JH767749.1                          15490381 16 -  27778364 T--agt-------t--acatta-----tatat
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17214 16 +     27315 TA--GT-------T--ACATTT-----TATAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 1
s Cercocebus_atys.KQ010504.1                                138896 15 -   4669795 T---CA-------T--ATGTCT-----CATAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42636 15 +     47900 T---CA-------T--ATGTCT-----CATAT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42469 15 -     44860 T---CA-------T--ATGTCT-----CATAT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42452 15 -    148725 T---CA-------T--ATGTCT-----CATAT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9709 15 -     17524 T---CA-------T--ATGTCT-----CATAT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25431 15 -     34525 T---CA-------T--ATGTCT-----CATAT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29908 15 -     45857 T---CA-------T--ATGTCT-----CATAT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23400 15 +     70610 T---CA-------T--ATGTCT-----CATAT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20325 15 +     36323 T---CA-------T--ATGTCT-----CATAT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11024 18 -     19938 TA--CA-------TATATATTT-----TACAA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28864 16 -     33796 T--GCA-------T--ATGTTT-----TATAC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3380 16 -     15404 T--GTA-------T--ATGTTT-----TTTAT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7207 15 -     32913 T---CG-------T--ATGTCT-----CATAT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17620 15 -     40346 T---CG-------T--ATGTCT-----CATAT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17875 15 +    216457 T---TG-------T--ATGTCT-----CATAT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17668 15 +     39636 T---CG-------T--ATGTCT-----CATAT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2036 15 +      5346 T---TG-------T--ATGTCC-----CATAT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40764 15 -    112038 T---CG-------T--ATGTCT-----CATAT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6336 15 +     34062 T---CG-------T--ATGTCT-----CATAT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341222 15 +  18827391 T---CA-------T--ATGTCT-----CATAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7767 15 -     44032 T---CA-------T--ATGTCT-----CATAT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302547 15 - 135778131 T---CA-------T--ATGTCT-----CATAT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406982 15 -   2368649 T---CA-------T--ATGTCT-----CATGT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376860 15 - 200372422 T---CA-------T--ATGTCT-----CATGT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                407 15 -     84244 T---CA-------T--ATGTCT-----CATGT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805479 16 +  53390261 CA--CA-------T--ATCTTT-----TATAT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           968 16 -      8242 TA--CA-------T--ACATTT-----TATTG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40490  6 -     83289 TA--CA-------T--A---------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 10
s Cricetulus_griseus.LT883664.1                          213112954  6 - 224834208 TA--CA-------C--C---------------
i Cricetulus_griseus.LT883664.1                          C 0 I 10
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2522 14 +     87169 ----CT-------T--ATGTTT-----TACAT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    642997  6 -   1526836 TA--CA-------T--A---------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3222 13 +     50838 TA--CACATGCATT--A---------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 3
s Cuniculus_paca.CunPac_flattened_line_7025                   1813 11 +     36344 TA--A--ATGTGTT--A---------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 3
s Dasypus_novemcinctus.JH564415.1                          2108353 16 -   2246927 T--Ggg-------t--atattt-----tataa
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290800 16 +  12879189 T--GCA-------T--ATGTTT-----TATGC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862935 16 -  20541912 T-C-CA-------T--AAGTTT-----GATTT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662673 16 -   1390856 t--act-------t--atattt-----tatat
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                  137458 16 -    198055 TA--GT-------T--ACATTT-----TATAT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Dinomys_branickii.DinBra_scaffold_10381                    96688 13 -    115145 TA--CACATGTGTT--A---------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 3
s Dipodomys_ordii.KN672350.1                              18948551  6 -  37912305 t--tta-------t--a---------------
i Dipodomys_ordii.KN672350.1                             I 3 I 3
s Dipodomys_stephensi.DipSte_scaffold_89095                   3498  6 -     10735 T--TTA-------T--A---------------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 3 I 3
s Dolichotis_patagonum.DolPat_scaffold_80628                  8134 13 +     14636 TA--AACATGTGTT--A---------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 3
s Echinops_telfairi.JH980293.1                            62852128 16 - 111700974 T--GTC-------C--AAACTT-----TATAA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4502 16 +     19438 t--ata-------t--atgctt-----tattt
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105675 15 -  10337057 TA--CA-------C---Tactt-----tataa
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29257  6 +    110024 TA--CA-------T--C---------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 10
s Ellobius_talpinus.LOJH01026522.1                           11233  6 +     18970 TA--CA-------A--C---------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 10
s Enhydra_lutris.KZ291758.1                               24914346 17 +  41312741 t-aaca-------T--ATGTTT-----TACAT
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                             12576569 16 +  14770903 t--aca-------t--atgttt-----tattt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039661 16 -   4378816 T--act-------t--acatat-----tatat
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               21373595 16 +  39960074 T--act-------t--acatat-----tatat
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.KK951119.1                              410381 16 -    498745 T--act-------t--acatat-----tatat
i Equus_przewalskii.KK951119.1                           C 0 I 1
s Erythrocebus_patas.Contig38                               260745 15 +  21539334 T---CA-------T--ATGTCT-----CATAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12972 16 -     24895 T--GCA-------T--ATGTTT-----TATAC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40684 16 -     70999 T--GCA-------T--ATGTTT-----TATAC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84643 16 +    112731 T--GCA-------T--ATGTTT-----TATAC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41216 16 +     68309 T--GCA-------T--ATGTTT-----TATAC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51541 16 -     65740 T--GCA-------T--ATGTTT-----TATAC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22171 16 -     75513 T--GCA-------T--ATGTTT-----TATAC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46364 16 -     97555 T--GCA-------T--ATGTTT-----TATAC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3091 16 +     30972 T--GCA-------T--ATGTTT-----TATAC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40814 16 -     52037 T--GCA-------T--ATGTTT-----TATAC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57215 16 -    111500 T--GCA-------T--ATGTTT-----TATAC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244971 14 - 206538554 ----CA-------T--AAGTTT-----TACAT
i Felis_catus.CM001381.2                                 I 1 I 1
s Felis_catus_fca126.CM031415.1                          185114757 14 - 205367284 ----CA-------T--AAGTTT-----TACAT
i Felis_catus_fca126.CM031415.1                          I 1 I 1
s Felis_nigripes.FelNig_flattened_line_31944                 25861 14 -     30238 ----CA-------T--AAGTTT-----TACAT
i Felis_nigripes.FelNig_flattened_line_31944             I 1 I 1
s Galago_moholi.ctg3793                                     122831 11 -    137831 T--GCA-------T--A----------TACAT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6371 16 +     22493 T--GCA-------T--ATGTTT-----TACAT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18423 16 -     32986 T--GCA-------T--ATGTTT-----TACAT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17285 16 +     18121 TA--TG-------T--ATGTTT-----TATAT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32156  6 -     36801 CA--TA-------T--A---------------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 10
s Gorilla_beringei.k141_3358147                               3648 15 -      8343 T---CA-------T--ATGTCT-----CATAT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 69120 15 +  33314783 T---CA-------T--ATGTCT-----CATAT
i Gorilla_gorilla.LT578336.1                             I 257 I 482
s Graphiurus_murinus.GraMur_scaffold_90206                   11475  6 +     11903 TA--TA-------T--A---------------
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 I 10
s Hapalemur_alaotrensis.k141_330369                          12899 16 -     40692 T--GCA-------T--ATGTTT-----TATAC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34300 16 +     49394 T--GCG-------T--ATGTTT-----TATAC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59169 16 -     66874 T--GCG-------T--ATGTTT-----TATAC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8042 16 -     42923 T--GCG-------T--ATGTTT-----TATAC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15042 16 -     53142 T--GCA-------T--ATGTTT-----TATAC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29008 14 -    327341 ----CA-------T--ATGTTT-----TACAT
i Helogale_parvula.HelPar_flattened_line_2585            I 1 I 1
s Heterocephalus_glaber.JH602082.1                         1925275 15 -  22651954 tttacaCATGTGTT--A---------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_23202               49051 16 +     49977 TA--CA-------T--ATGTTT-----TATTT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 1
s Hoolock_leuconedys.ctg274                                    140647 15 -    630532 T---CA-------T--ATGTCT-----CATAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67681 14 +     83186 ----CA-------T--ATGTTT-----TACAT
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69568 13 +    143317 TA--AATACGTGTT--A---------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 3
s Hylobates_agilis.k141_1155965                               3682 15 +     12352 T---CA-------T--ATGTCT-----CGTAT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10865 15 +     55766 T---CA-------T--ATGTCT-----CGTAT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050461 15 + 191637585 T---CA-------T--ATGTTT-----CATAT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799339 15 +  11177569 T---CA-------T--ATGTTT-----CATAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385012  3 +   7955117 -----------------------------tat
i Ictidomys_tridecemlineatus.JH393364.1                  I 12 C 0
s Indri_indri.k141_2415743                                     555 16 +     11955 T--GCA-------T--ATGTTT-----TATAC
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237406  6 +   9596543 t--gta-------t--a---------------
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Lagothrix_lagothricha.k141_246028                          41476 15 +    110728 T---CG-------T--ATGTCC-----CATAT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60044 16 -     65777 TA--CG-------T--ATGTTT-----TATTT
i Lasiurus_borealis.LasBor_scaffold_16567                I 14 I 73
s Lemur_catta.scaffold_24                                 14757690 16 +  30322482 T--GCA-------T--ATGTTT-----TATAC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2141 15 -     13097 T---TG-------T--ATGTCC-----CATAT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2092 15 +      5940 T---TG-------T--ATGTCC-----CATAT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1726 15 -      5717 T---TG-------T--ATGTCC-----CATAT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8342 15 -     11567 T---CG-------T--CTGTCC-----CATAT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9723 15 -     12945 T---CG-------T--CTGTCC-----CATAT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7219 16 +     29618 T--GCT-------T--ATGTTT-----TATAC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7216 16 +     31569 T--GCT-------T--ATGTAT-----TATAC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7226 16 +     24756 T--GCT-------T--ATGTTT-----TATAC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7225 16 +     16388 T--GCT-------T--ATGTTT-----TATAC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811722 17 -   3914936 t-aaca-------t--aTGTTT-----TACAT
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lepus_americanus.LepAme_scaffold_56121                     16111  2 +     24238 ------------------------------AC
i Lepus_americanus.LepAme_scaffold_56121                 I 6 C 0
s Lophocebus_aterrimus.ctg367                               330849 15 -   1826925 T---CA-------T--ATGTCT-----CATAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8585 16 +     19643 T--GTA-------T--ATGTTT-----TACAT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042246 16 -   6120653 T--GTA-------T--ATGTTT-----TACAT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078487 16 +  43346337 TA--CA-------T--ATACTC-----TATAA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41612876 15 +  59628241 t-aaca-------t--a--ttt-----tacat
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_1757516                              43166 15 -     61512 T---CA-------T--ATGTCT-----CATAT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370827 15 -  60120075 T---CA-------T--ATGTCT-----CATAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23082 15 +     30207 T---CA-------T--ATGTCT-----CATAT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20185 15 -     24934 T---CA-------T--ATGTCT-----CATAT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23034 15 +     30527 T---CA-------T--ATGTCT-----CATAT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34224 15 -     50087 T---CA-------T--ATGTCT-----CATAT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  43994 15 +     51645 T---CA-------T--ATGTCT-----CATAT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413163 15 - 187317192 T---CA-------T--ATGTCT-----CATAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397386 15 +  25927173 T---CA-------T--ATGTCT-----CATAT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46550 15 -     62418 T---CA-------T--ATGTCT-----CATAT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23205 15 +     24253 T---CA-------T--ATGTCT-----CATAT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43026 15 +     59329 T---CA-------T--ATGTCT-----CATAT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268954 15 +    668171 T---CA-------T--ATGTCT-----CATAT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20140 15 +     21031 T---CA-------T--ATGTCT-----CATAT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  737 15 +     17132 T---CA-------T--ATGTCT-----CATAT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221466 16 -    270270 TA--CA-------T--ATGCTT-----TATCT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320237 15 +  24302211 T---CA-------T--ATGTCT-----CATAT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355069 15 -    752769 T---CA-------T--ATGTCT-----CATAT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671763 16 -    737560 t--aca-------t--gtGTTT-----TATAA
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                             219053 15 +    317179 t--aca-------t--gtgt-t-----tatat
i Manis_pentadactyla.KN006162.1                          C 0 I 1
s Marmota_marmota.CZRN01000018.1                           7499222  3 +  40650429 -----------------------------tat
i Marmota_marmota.CZRN01000018.1                         I 12 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148667 16 +    207569 TA--TA-------C--ATGTTT-----TATTT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24227 10 -     74585 -----------------TGTTT-----TACAT
i Mellivora_capensis.MelCap_flattened_line_19308         I 5 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 46860  6 -    140813 TA--CA-------T--A---------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 10
s Mesocricetus_auratus.KB708134.1                         17427507  6 +  29670104 TA--CA-------C--C---------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 10
s Mico_argentatus.k141_582562                                 8104 15 +     17804 T---CA-------T--ATGTCC-----CATAT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8888 15 -     12984 T---CA-------T--ATGTCC-----CATAT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16839 15 -     26561 T---CA-------T--ATGTCC-----CATAT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982832 11 +  93316391 T--GCA-------T--ATGTTT----------
i Microcebus_murinus.CM007674.1                          C 0 I 4
s Microgale_talazaci.MicTal_scaffold_6613                    43224 16 +    145209 T--GTC-------T--GTACTT-----TATAA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182883 16 +    200668 TA--CA-------T--ATGTTT-----GATTT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960652  6 +  27267610 TA--CA-------T--C---------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 10
s Miniopterus_natalensis.LDJU01000034.1                    6360998 16 -   8254450 t--acG-------T--ATGTTT-----TGTTT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39899 16 -     48117 TA--CG-------T--ATGTTT-----TGTTT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20264 15 -     27822 T---CA-------T--ATGTCT-----CATAT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6733 17 +     27589 TA-ACA-------T--ATGTTT-----TACAT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 1
s Mirza_zaza.k141_766280                                     50623 11 -     62432 T--GCA-------T--ATGTTT----------
i Mirza_zaza.k141_766280                                 C 0 I 4
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177046  7 +    366855 --------------------TT-----GATTT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16761 14 -     63510 ----CA-------T--ATGTTT-----TACAT
i Mungos_mungo.MunMun_flattened_line_18455               I 1 I 1
s Murina_feae.MurFea_scaffold_17764                          36913 16 +     47283 T--GCA-------T--ATGTTT-----TATTT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_musculus.chr8                                       41685651  3 + 129401213 -----------------------------tat
i Mus_musculus.chr8                                      I 13 C 0
s Mus_spretus.CM004101.1                                  39494969  3 + 130317789 -----------------------------tat
i Mus_spretus.CM004101.1                                 I 13 C 0
s Mus_caroli.FMAL02030609.1                                   4935  6 +      5579 t--ata-------t--a---------------
i Mus_caroli.FMAL02030609.1                              C 0 I 10
s Muscardinus_avellanarius.MusAve_scaffold_12866             80755  6 -     86153 TA--TA-------T--A---------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 10
s Mustela_putorius.JH418006.1                             14353372 17 +  14710649 t-aaCA-------T--ATGTTT-----TACAT
i Mustela_putorius.JH418006.1                            I 209 I 1
s Myotis_brandtii.KE162005.1                               9790958 16 +  10118263 t--aca-------t--atgttt-----tattt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385320 16 +   6019432 t--aca-------t--atgttt-----tattt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381140 16 +   4330536 t--aca-------t--atgttt-----tattt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3699 16 +      3929 TA--CA-------T--ATGTTT-----TATTT
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117803 16 +    130748 TA--CA-------T--ATATTT-----TATAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26845 15 +     34575 T---CA-------T--ATGTCT-----CATGT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467325 17 -  31847680 TA-GCG-------T--ATGTTT-----TGCAT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_7894                   125847 16 -    149072 TA--CA-------T--ATGTTT-----GATTT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51571 15 -    132029 T---CA-------T--ATGTCT-----CATAT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7666 15 -     16345 T---CA-------T--ATGTCT-----CATAT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13551 15 +     22201 T---CA-------T--ATGTCT-----CATAT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411835 15 -  22158432 T---CA-------T--ATGTCT-----CATAT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23949 15 -     54323 T---CA-------T--ATGTCT-----CATAT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196478 15 +   9404916 t-aaca-------t--a--ttt-----tacat
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                             93634597 16 + 196305487 T--GTA-------T--ATCTTT-----TACAT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1355 16 -      3937 T--GTA-------T--ATCTTT-----TACAT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562836 16 - 199412804 T--GTA-------T--ATGTTT-----TACAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549498  2 -   3988456 ------------------------------AA
i Ochotona_princeps.JH802162.1                           I 7 C 0
s Octodon_degus.JH651603.1                                11045730 13 -  11899542 TA--CATGTGTGTT--A---------------
i Octodon_degus.JH651603.1                               C 0 I 3
s Odobenus_rosmarus.KB229312.1                             1449921 17 +   2017862 t-aaca-------t--atGTCT-----TACAT
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_7387                    91018  6 -    140218 G--GCA-------T--C---------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 8
s Onychomys_torridus.OnyTor_scaffold_2487                   105448  6 +    107918 TA--TA-------T--C---------------
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 I 10
s Orycteropus_afer.OryAfe_flattened_line_171931              11593 16 -     14239 TA--CA-------T--ATACCT-----TATGA
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107101964  2 - 174332312 ------------------------------AC
i Oryctolagus_cuniculus.CM000791.1                       I 6 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37515 15 +    559221 t-aaca-------t--a--ttt-----tacat
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_649260                        37979 16 -     51505 T--GCG-------T--ATGTTT-----TACAT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350982 16 +   1103335 T--GCA-------T--ATGTTT-----TACAT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.KZ622849.1                                 31347 15 -    110857 T---CA-------T--ATGTCT-----CATAT
i Pan_troglodytes.KZ622849.1                             I 29 I 325
s Panthera_onca.PanOnc_flattened_line_3271                   22681 14 -    230217 ----CA-------T--AAGTTT-----TACAT
i Panthera_onca.PanOnc_flattened_line_3271               I 1 I 1
s Panthera_pardus.KV860321.1                              18460007 14 -  18783137 ----CA-------T--AAGTTT-----TACAT
i Panthera_pardus.KV860321.1                             I 1 I 1
s Panthera_tigris.KE722367.1                               3970727 14 +   8748460 ----ca-------t--aaattt-----tacat
i Panthera_tigris.KE722367.1                             I 1 I 1
s Papio_anubis.CM001495.2                                   241077 15 - 183742232 T---CA-------T--ATGTCT-----CATAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7541 15 +     21308 T---CA-------T--ATGTCT-----CATAT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288580 15 -  20919399 T---CA-------T--ATGTCT-----CATAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20196 15 -     27687 T---CA-------T--ATGTCT-----CATAT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13332 15 +     16796 T---CA-------T--ATGTCT-----CATAT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20142 15 -     23640 T---CA-------T--ATGTCT-----CATAT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13324 14 +     78924 ----CA-------T--ATGTTT-----TACAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 I 1
s Perodicticus_ibeanus.k141_1921260                          24263 16 +     31479 T--GCA-------T--ATGTTT-----TACAC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16622 16 -     24908 T--GCA-------T--ATGTTT-----TACAC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37751  3 +     38305 -----------------------------TAT
i Perognathus_longimembris.PerPac_flattened_line_28053   I 7 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30200  3 -     56120 -----------------------------TAT
i Petromus_typicus.PetTyp_scaffold_17301                 I 11 C 0
s Peromyscus_maniculatus.KI615324.1                         245080  4 +  18517816 ----CA-------T--C---------------
i Peromyscus_maniculatus.KI615324.1                      I 2 I 10
s Piliocolobus_badius.k141_2704958                             360 15 +     55023 T---CA-------T--ATGTCT-----CATTT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             361 15 +     40849 T---CA-------T--ATGTCT-----CATTT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252109 15 +  14605196 T---CA-------T--ATGTCT-----CATTT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1083 16 +     22231 TA--CA-------T--ATGTTT-----TATTT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63111 15 +    207309 T---CG-------C--ATGTCT-----CATAT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4205 15 -     25401 T---CG-------C--ATGTCT-----CATAT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29946 15 +     58159 T---CG-------C--ATGTCT-----CATAT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30222 15 +     63561 T---CG-------C--ATGTCT-----CATAT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           29985 15 +     51148 T---CG-------C--ATGTCT-----CATAT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554952 15 -   4542175 T---CG-------C--ATGTCT-----CATAT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29969 15 +     51125 T---CG-------C--ATGTCT-----CATAT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6376 15 +     39866 T---CG-------T--ATGCCT-----CATAT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1461 15 -      9282 T---CG-------T--ATGCCT-----CATAT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40865 15 -     87950 T---CG-------T--ATGCCT-----CATAT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41258 15 -     88961 T---CG-------T--ATGCCT-----CATAT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5957 15 -     39403 T---CG-------T--ATGCCT-----CATAT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40909 15 +     87928 T---CG-------T--ATGCCT-----CATAT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5954 15 -     60166 T---CG-------T--ATGCCT-----CATAT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12890 15 -     67232 T---CG-------T--ATGCCT-----CATAT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40806 15 -     90634 T---CG-------T--ATGCCT-----CATAT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42274 15 +     89403 T---CG-------T--ATGCCT-----CATAT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175804 15 - 189387572 T---CA-------T--ATGTCT-----CATAT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190622 15 -   9816681 T---CA-------T--ATGTCT-----CATAT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25459 15 +     69807 T---CA-------T--ATGTCT-----CATGT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42654 15 -     80239 T---CA-------T--ATGTCT-----CATGT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980846 16 +   4620579 T--GCA-------T--ATGTTT-----TATAG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564314 16 -   2598838 t--gca-------t--atattt-----tatac
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1950 16 -      7103 T--GCA-------T--ATATTT-----TATAC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2547 16 -     11706 T--GCA-------T--ATGTTT-----TATAC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6283 16 -     30655 T--GCA-------T--ATGTTT-----TATAC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32608 16 +     46564 T--GCA-------T--ATGTTT-----TATAC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92879 16 -     98465 T--GCA-------T--ATGTTT-----TATAC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6516 16 +     35169 T--GCA-------T--ATATTT-----TATAC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34404  6 +     52041 TA--CA-------T--A---------------
i Psammomys_obesus.NESX01036366.1                        C 0 I 10
s Pteronotus_parnellii.KE847780.1                            50123  9 -     66298 t--aca-------T--AGGT------------
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2937 17 -     18639 TA-ACA-------T--ATGTTT-----TACGT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 1
s Pteropus_alecto.KB030862.1                               5839095 16 -  28871421 TA--CA-------T--ATGCTT-----TATTT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535661 16 -   4952924 TA--CA-------T--ATGCTT-----TATTT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097324 14 +  38429054 ----CA-------T--AAGTTT-----TACAT
i Puma_concolor.QAVW01001104.1                           I 1 I 1
s Pygathrix_cinerea.k141_1153803                             24869 15 +     91421 T---CA-------T--ATGTCT-----CATGT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151362 15 -   7812017 T---CA-------T--ATGTCT-----CATGT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5739 15 +     72585 T---CA-------T--ATGTCT-----CATGT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020862  3 -  90668790 -----------------------------tAT
i Rattus_norvegicus.chr16                                I 13 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913057 16 +   3329780 t--cca-------t--atgttt-----tattt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26679 15 +     27361 T---CA-------T--ATGTCT-----CATGT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120046 15 + 195417433 T---CA-------T--ATGTCT-----CATGA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234287 15 -   7961872 T---CA-------T--ATGTCT-----CATGT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73077 16 -    116970 TA--CA-------T--ATGCTC-----TATTT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2034 15 +     27962 T---TG-------T--ATGTCC-----CATAT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2042 15 +      6077 T---TG-------T--ATGTCC-----CATAT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2079 15 +      5971 T---TG-------T--ATGTCC-----CATAT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2133 15 +      5932 T---CG-------T--ATGTCC-----CACAT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               316 15 -      4390 T---CG-------T--ATGTCC-----CACAT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389382 15 - 209938924 T---TG-------T--ATGTCC-----CATAT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2081 15 +      5979 T---CG-------T--ATGTCC-----CATAT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2429 15 -      4301 T---TG-------T--ATGTCC-----CATAT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236537 15 +   5703754 T---CA-------T--ATGTCC-----CATAT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6127 15 +     21866 T---CA-------T--ATGTCC-----CATAT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114284  6 +    313613 TA--CA-------T--A---------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 1
s Semnopithecus_entellus.k141_158471                         23186 15 +     27374 T---CA-------T--ATGTCT-----CATGT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26705 15 +     58920 T---CA-------T--ATGTCT-----CATGT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13201 15 -     45317 T---CA-------T--ATGTCT-----CATGT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20859 15 -     42441 T---CA-------T--ATGTCT-----CATGT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23539 15 -     29113 T---CA-------T--ATGTCT-----CATGT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26608 15 -     48123 T---CA-------T--ATGTCT-----CATGT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46955  3 +     77746 -----------------------------TAT
i Sigmodon_hispidus.SigHis_scaffold_20193                I 13 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856592 16 -   1910179 TA--CA-------G--ATGTTT-----TATAT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 2
s Spermophilus_dauricus.KZ294078.1                         1866568  5 +   3870691 TA---T-------T--A---------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 10
s Spilogale_gracilis.SpiGra_flattened_line_13525              4745 17 -     97271 TA-ACA-------T--GTGTTT-----TACAT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629             123168 14 +    196729 ----CA-------T--ATGTTT-----TACAT
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 I 1
s Symphalangus_syndactylus.tarseq_199                       389108 15 +   1523678 T---CA-------T--ATGTCT-----CATAT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11901 18 +     22964 TA--CT-------T-----TTTAAAAAAATTT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 923 16 +      5583 TA--CA-------T--ATATTT-----TATAA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189832 16 +    199430 TA--CT-------T--ACATTT-----TACGC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    103786 16 -    539355 TA--CT-------T--ACATTT-----TACAC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_1780720                                5146 18 +      6850 TATGTA-------T--GTTTTT-----TATAT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5187 18 +     20590 TATGTA-------T--GTTTTT-----TATAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351063 15 - 186847797 T---CA-------T--ATGTCT-----CATAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22519 13 -     33621 T--TCACATGTGTT--A---------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_31955                   18046 16 -     31044 TA--AA-------T--ATGTTT-----TATAA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477944 16 -    610378 TA--CA-------T--ATGTTT-----GATTT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18750 15 +     26378 T---CA-------T--ATGTCT-----CATGT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31414 15 -     78344 T---CA-------T--ATGTCT-----CATGT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18071 15 +     25722 T---CA-------T--ATGTCT-----CATGT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26296 15 -     62838 T---CA-------T--ATGTCT-----CATGT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26413 15 +     46913 T---CA-------T--ATGTCT-----CATGT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7221 13 -     28527 T---CA-------T--ATGTCT-----C--GT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28235 15 -     64340 T---CA-------T--ATGTCT-----CATGT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26272 15 -     63452 T---CA-------T--ATGTCT-----CATGT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7715 15 +     22490 T---CA-------T--ATGTCT-----CATGT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1143 15 -      6147 T---CA-------T--ATGTCT-----CATGT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8117 15 -     13050 T---CA-------T--ATGTCT-----CATGT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253356 15 -   6242583 T---CA-------T--ATGTCT-----CATGT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59107 15 +     59866 T---CA-------T--ATGTCT-----CATGT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832132 17 -   4065304 t--aaa-------a-aaaattt-----tattt
i Tupaia_chinensis.KB320699.1                            I 2 I 229
s Tupaia_tana.TupTan_flattened_line_394                       6410 16 -     70247 TA--AA-------A--AAATTt-----ttttt
i Tupaia_tana.TupTan_flattened_line_394                  I 2 I 265
s Uropsilus_gracilis.UroGra_scaffold_46687                     473 16 -     21056 TA--TG-------T--ATGTTT-----TACAT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 5
s Ursus_maritimus.KK499267.1                                180089 17 +   5085361 t-aaca-------t--aTGTTT-----TACAT
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_787544                                  23491 16 -     30710 T--GCA-------T--ATGTTT-----TATAC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22398 16 -    147434 T--GCA-------T--ATGTTT-----TATAC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103237 15 -    112863 TA-ACA-------T--A--TTT-----TACAT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 1
s Xerus_inauris.XerIna_scaffold_2302                        172342  5 -    224448 TA---A-------T--A---------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 10
s Zalophus_californianus.ZalCal_flattened_line_17732         27119 17 -     86975 TA-ACA-------T--ATGTCT-----TACAT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_230229                      1591  6 +      2695 T--TCA-------T--A---------------
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 3
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786  8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3326  9 +     36723 A---T--------GAT----G----C-TT
s Acinonyx_jubatus.LLWD01001279.1                           811076  8 +   1699592 ---------------TGA-TG----T-GT
i Acinonyx_jubatus.LLWD01001279.1                        I 1 I 21
s Acomys_cahirinus.AcoCah_scaffold_21377                     18125  9 +     63021 G---T--------GAT----G----T-TT
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 10 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413594  8 +  29979442 ---------------TGA-TG----T-AT
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 I 21
s Ailurus_fulgens.LNAC01001112.1                            213703  8 +    347723 ---------------tga-ta----t-AT
i Ailurus_fulgens.LNAC01001112.1                         I 1 I 21
s Allactaga_bullata.AllBul_scaffold_20030                    16228 14 -     61208 T---TACTATGGACGT----G--------
i Allactaga_bullata.AllBul_scaffold_20030                I 3 I 2
s Allenopithecus_nigroviridis.k141_3755588                   45732  9 +     53615 A---T--------GAT----G----C-TT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41672  9 +     44087 A---T--------GAT----G----C-TT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14312  9 -     21945 A---T--------GAT----G----C-TT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15988  9 +     32033 A---T--------GAT----G----C-TT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70436  9 -     84148 A---T--------GAT----G----T-TT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42669  9 -     78289 A---T--------GAT----G----T-TT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42115  9 +     55831 A---T--------GAT----G----T-TT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40556  9 -     64179 A---T--------GAT----G----T-TT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22203  9 -     24835 A---T--------GAT----G----T-TT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39186  9 +     45454 A---T--------GAT----G----T-TT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44884  9 +     70886 A---T--------GAT----G----T-TT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7009  9 +     30854 A---T--------GAT----G----T-TT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31148  9 +     42133 A---T--------GAT----G----T-TT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174927  9 -    412891 A---T--------GGT----G----T-TT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48958  9 -     65372 A---G--------GAT----A----T-TT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42705  9 +     43593 A---T--------GAT----A----T-TT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670718  9 +   5030052 A---T--------GAT----A----T-TT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22360  9 -     23494 A---T--------GAT----A----T-TT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7496  9 +      8415 A---T--------GAT----A----T-TT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14271  5 -     32367 A---T--------GAT-------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 10 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3213  9 -     15198 A---T--------GGT----G----T-TT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272948  9 +  21539123 A---C--------GAT----G----T-TT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9115  9 +     48076 A---C--------GAT----G----T-TT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4252  9 -     28759 A---C--------GAT----G----T-TT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31805  9 +     44353 A---C--------GAT----G----T-TT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47176  9 -     71267 A---C--------GAT----G----T-TT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21235  9 -     33135 A---C--------GAT----G----T-TT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4446  9 +     11645 A---T--------GAC----A----T-TT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4452  9 -     19611 G---T--------GAC----A----T-TT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6139  9 +     28062 C---C--------GAT----G----T-TT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41433  9 -     91139 C---C--------GAT----G----T-TT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18959  9 +     95584 C---C--------GAT----G----T-TT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18872  9 +    119600 C---C--------GAT----G----T-TT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8347  9 +     18648 A---C--------GAT----G----T-TT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8008  9 -     13885 A---C--------GAT----G----T-TT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16708  9 +     17162 A---C--------GAT----G----T-TT
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451663  9 + 189096842 A---C--------GAT----G----T-TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17956  9 -     18408 A---C--------GAT----G----T-TT
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503623  8 +  60362399 ---------------TGA-TG----T-AT
i CanFam4.chr16                                          I 1 I 21
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7259  8 -     23171 ---------------TGA-TG----T-AT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 1 I 21
s Canis_lupus_dingo.QKWQ01000480.1                          220602  8 +   9314153 ---------------tga-tG----T-AT
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 I 21
s Canis_lupus_familiaris.chr16                            41613737  8 +  59632846 ---------------tga-tG----T-AT
i Canis_lupus_familiaris.chr16                           I 1 I 21
s Canis_lupus_orion.HG994398.1                            45105318  8 -  63665305 ---------------tga-tG----T-AT
i Canis_lupus_orion.HG994398.1                           I 1 I 21
s Carlito_syrichta.NW_007259797.1                           268472  9 +    496798 A---T--------GAT----G----T-AT
i Carlito_syrichta.NW_007259797.1                        C 0 I 13
s Carollia_perspicillata.CarPer_scaffold_170178               3505  9 +      5315 A---T--------GGT----G----T-TT
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 13
s Cavia_aperea.AVPZ01000300.1                              4994204  9 +  23392119 G---T--------GAT----G----A-TT
i Cavia_aperea.AVPZ01000300.1                            I 3 I 16
s Cavia_porcellus.DS562891.1                               4997646  9 +  23407841 G---T--------GAT----G----A-TT
i Cavia_porcellus.DS562891.1                             I 3 I 16
s Cavia_tschudii.CavTsc_scaffold_23560                       60747  9 -     66877 G---T--------GAT----G----A-TT
i Cavia_tschudii.CavTsc_scaffold_23560                   I 3 I 16
s Cebuella_niveiventris.k141_592277                           3240  9 -     12580 A---C--------GAT----G----T-TT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41126  9 +     53515 A---C--------TAT----G----T-TT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369332  9 -  26074798 A---T--------GAT----G----T-TT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6221  9 -     34880 A---T--------GAT----G----T-TT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65316  9 -     89041 A---T--------GAT----G----T-TT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          449  9 -      5494 A---T--------GAT----G----T-AT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490398  8 -  27778364 ---------------tga-tg----T-TT
i Ceratotherium_simum.JH767749.1                         I 1 I 21
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17231  8 +     27315 ---------------TGA-TG----T-TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 1 I 21
s Cercocebus_atys.KQ010504.1                                138911  9 -   4669795 A---T--------GAT----G----C-TT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42651  9 +     47900 A---T--------GAT----G----C-TT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42484  9 -     44860 A---T--------GAT----G----C-TT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42467  9 -    148725 A---T--------GAT----G----C-TT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9724  9 -     17524 A---T--------GAT----G----C-TT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25446  9 -     34525 A---T--------GAT----G----C-TT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29923  9 -     45857 A---T--------GAT----G----C-TT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23415  9 +     70610 A---T--------GAT----G----C-TT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20340  9 +     36323 A---T--------GAT----G----C-TT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11042  9 -     19938 A---T--------GAT----G----T-TT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28880  9 -     33796 A---T--------GAC----A----T-TT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3396  9 -     15404 A---T--------GAC----A----T-TT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7222  9 -     32913 C---C--------GAT----G----T-TT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17635  9 -     40346 C---C--------GAT----G----T-TT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17890  9 +    216457 C---C--------GAT----G----T-TT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17683  9 +     39636 C---C--------GAT----G----T-TT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2051  9 +      5346 A---C--------GAT----G----T-TT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40779  9 -    112038 C---C--------GAT----G----T-TT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6351  9 +     34062 C---C--------GAT----G----T-TT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341237  9 +  18827391 A---T--------GAT----G----C-TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7782  9 -     44032 A---T--------GAT----G----C-TT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302562  9 - 135778131 A---T--------GAT----G----C-TT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             406997  9 -   2368649 A---T--------GAT----G----C-TT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376875  9 - 200372422 A---T--------GAT----G----C-TT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                422  9 -     84244 A---T--------GAT----G----C-TT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805495  5 +  53390261 AGGAT------------------------
i Condylura_cristata.JH655891.1                          C 0 I 15
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           984 13 -      8242 G---T--------GAT----GGGAGA-TT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40506  9 -     83289 G---T--------GAT----G----T-TT
i Cricetomys_gambianus.CriGam_scaffold_14425             I 10 C 0
s Cricetulus_griseus.LT883664.1                          213112970  9 - 224834208 G---T--------GAT----G----T-TT
i Cricetulus_griseus.LT883664.1                          I 10 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2537  8 +     87169 ---------------TGA-TG----T-GT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 I 21
s Ctenodactylus_gundi.CteGun_scaffold_65                    643006  9 -   1526836 G---A--------AAC----G----T-TT
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 3 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3238  9 +     50838 G---T--------GAT----G----G-TT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 3 I 16
s Cuniculus_paca.CunPac_flattened_line_7025                   1827  9 +     36344 G---T--------GAT----G----A-TT
i Cuniculus_paca.CunPac_flattened_line_7025              I 3 I 10
s Dasypus_novemcinctus.JH564415.1                          2108369  9 -   2246927 a---c--------atg----G----T-TT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290816  9 +  12879189 A---T--------GAC----A----T-TT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862951  9 -  20541912 A---C--------GGT----G----T-TT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662690  8 -   1390856 ---------------tga-tg----t-tT
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 I 21
s Diceros_bicornis.DicBicMic_scaffold_5955                  137475  8 -    198055 ---------------TGA-TG----T-TT
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 I 21
s Dinomys_branickii.DinBra_scaffold_10381                    96704  9 -    115145 G---T--------GAT----G----G-TT
i Dinomys_branickii.DinBra_scaffold_10381                I 3 I 16
s Dipodomys_ordii.KN672350.1                              18948560  9 -  37912305 g---c--------ctt----g----t-tt
i Dipodomys_ordii.KN672350.1                             I 3 I 9
s Dipodomys_stephensi.DipSte_scaffold_89095                   3507  9 -     10735 G---C--------CTT----G----T-TC
i Dipodomys_stephensi.DipSte_scaffold_89095              I 3 I 9
s Dolichotis_patagonum.DolPat_scaffold_80628                  8150  9 +     14636 G---T--------GAT----G----G-TT
i Dolichotis_patagonum.DolPat_scaffold_80628             I 3 I 16
s Echinops_telfairi.JH980293.1                            62852144  9 - 111700974 A---C--------GAT----G----T-TT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4518  9 +     19438 a---t--------gAT----G----T-TT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105690  9 -  10337057 a---a--------gat----a----t-tt
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29273  9 +    110024 G---T--------GAT----G----T-TT
i Ellobius_lutescens.LOEQ01008920.1                      I 10 C 0
s Ellobius_talpinus.LOJH01026522.1                           11249  9 +     18970 G---T--------GAT----G----T-TT
i Ellobius_talpinus.LOJH01026522.1                       I 10 C 0
s Enhydra_lutris.KZ291758.1                               24914364  8 +  41312741 ---------------TGA-TG----T-AT
i Enhydra_lutris.KZ291758.1                              I 1 I 31
s Eptesicus_fuscus.JH977646.1                             12576585  9 +  14770903 a---t--------ggt----G----T-TT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039678  8 -   4378816 ---------------tga-tg----T-TT
i Equus_asinus.JREZ01000139.1                            I 1 I 21
s Equus_caballus.CM000403.2                               21373612  8 +  39960074 ---------------tga-tg----T-TT
i Equus_caballus.CM000403.2                              I 1 I 21
s Equus_przewalskii.KK951119.1                              410398  8 -    498745 ---------------tga-tg----T-TT
i Equus_przewalskii.KK951119.1                           I 1 I 21
s Erythrocebus_patas.Contig38                               260760  9 +  21539334 A---T--------GAT----G----C-TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12988  9 -     24895 A---T--------GAC----A----T-TT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40700  9 -     70999 A---T--------GAC----A----T-TT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84659  9 +    112731 A---T--------GAC----A----T-TT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41232  9 +     68309 A---T--------GAC----A----T-TT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51557  9 -     65740 A---T--------GAC----A----T-TT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22187  9 -     75513 A---T--------GAC----A----T-TT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46380  9 -     97555 A---T--------GAC----A----T-TT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3107  9 +     30972 A---T--------GAC----A----T-TT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40830  9 -     52037 A---T--------GAC----A----T-TT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57231  9 -    111500 A---T--------GAC----A----T-TT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186244986  8 - 206538554 ---------------TGA-TG----T-GT
i Felis_catus.CM001381.2                                 I 1 I 21
s Felis_catus_fca126.CM031415.1                          185114772  8 - 205367284 ---------------TGA-TG----T-GT
i Felis_catus_fca126.CM031415.1                          I 1 I 21
s Felis_nigripes.FelNig_flattened_line_31944                 25876  8 -     30238 ---------------TGA-TG----T-GT
i Felis_nigripes.FelNig_flattened_line_31944             I 1 I 21
s Galago_moholi.ctg3793                                     122842  9 -    137831 G---C--------GAG----G----T-TT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6387  9 +     22493 G---C--------GAG----G----T-TT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18439  9 -     32986 G---T--------GAC----G----T-TT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17301  9 +     18121 A---T--------GAT----G----A-GT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32172  9 -     36801 G---T--------GAT----G----T-TT
i Glis_glis.GliGli_scaffold_33859                        I 10 C 0
s Gorilla_beringei.k141_3358147                               3663  9 -      8343 A---T--------GAT----G----C-TT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252674  9 - 186649187 A---T--------GAT----G----C-TT
i Gorilla_gorilla.LT578341.1                             I 15 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11491  9 +     11903 G---T--------AAT----G----T-TT
i Graphiurus_murinus.GraMur_scaffold_90206               I 10 C 0
s Hapalemur_alaotrensis.k141_330369                          12915  9 -     40692 A---T--------GAC----A----T-TT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34316  9 +     49394 A---T--------GAC----A----T-TT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59185  9 -     66874 A---T--------GAC----A----T-TT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8058  9 -     42923 A---T--------GAC----A----T-TT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15058  9 -     53142 A---T--------GAC----A----T-TT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29023  8 -    327341 ---------------TGA-TG----T-GC
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Heterocephalus_glaber.JH602082.1                         1925293  9 -  22651954 G---T--------GAT----G----A-TT
i Heterocephalus_glaber.JH602082.1                       I 3 I 11
s Hipposideros_galeritus.HipGal_scaffold_23202               49068  3 +     49977 -------------------------T-TT
i Hipposideros_galeritus.HipGal_scaffold_23202           I 1 C 0
s Hoolock_leuconedys.ctg274                                    140662  9 -    630532 A---T--------GAT----G----C-TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67696  8 +     83186 ---------------TGA-TG----T-GT
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1 I 21
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69584  9 +    143317 G---T--------GAT----G----A-TT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3 I 16
s Hylobates_agilis.k141_1155965                               3697  9 +     12352 A---T--------GAT----G----C-TT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10880  9 +     55766 A---T--------GAT----G----C-TT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050476  9 + 191637585 A---T--------GAT----G----C-TT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799354  9 +  11177569 A---T--------GAT----G----C-TT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385015  9 +   7955117 g---t--------gaT----G----T-TT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 20
s Indri_indri.k141_2415743                                     571  9 +     11955 A---T--------GAC----A----T-TT
i Indri_indri.k141_2415743                               C 0 I 4
s Jaculus_jaculus.JH725527.1                               1237415 14 +   9596543 T---TACTATGGATGT----G--------
i Jaculus_jaculus.JH725527.1                             I 3 I 2
s Lagothrix_lagothricha.k141_246028                          41491  9 +    110728 A---T--------GAT----G----T-TT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    29300  9 -     49555 A---T--------GGT----G----T-TT
i Lasiurus_borealis.LasBor_scaffold_26245                I 16 C 0
s Lemur_catta.scaffold_24                                 14757706  9 +  30322482 A---T--------GAC----A----T-TT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2156  9 -     13097 A---C--------GAT----G----T-TT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2107  9 +      5940 A---C--------GAT----G----T-TT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1741  9 -      5717 A---C--------GAT----G----T-TT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8357  9 -     11567 A---C--------GAT----G----T-TT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9738  9 -     12945 A---C--------GAT----G----T-TT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7235  9 +     29618 A---T--------GAC----A----T-TT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7232  9 +     31569 A---T--------GAC----A----T-TT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7242  9 +     24756 A---T--------GAC----A----T-TT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7241  9 +     16388 A---T--------GAC----A----T-TT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811740  8 -   3914936 ---------------TGA-TG----T-AT
i Leptonychotes_weddellii.KB714746.1                     I 1 I 21
s Lepus_americanus.LepAme_scaffold_56121                     16113  9 +     24238 A---C--------GAT----A----T-TT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 1
s Lophocebus_aterrimus.ctg367                               330864  9 -   1826925 A---T--------GAT----G----C-TT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8601  9 +     19643 G---T--------GAT----G----T-TT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042262  9 -   6120653 G---T--------GAT----G----T-TT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078503  9 +  43346337 A---T--------GAT----G----T-TT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41612892  8 +  59628241 ---------------tga-tg----T-AT
i Lycaon_pictus.CM007581.1                               I 1 I 21
s Macaca_arctoides.k141_1757516                              43181  9 -     61512 A---T--------GAT----G----C-TT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370842  9 -  60120075 A---T--------GAT----G----C-TT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23097  9 +     30207 A---T--------GAT----G----C-TT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20200  9 -     24934 A---T--------GAT----G----C-TT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23049  9 +     30527 A---T--------GAT----G----C-TT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34239  9 -     50087 A---T--------GAT----G----C-TT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44009  9 +     51645 A---T--------GAT----G----C-TT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413178  9 - 187317192 A---T--------GAT----G----C-TT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397401  9 +  25927173 A---T--------GAT----G----C-TT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46565  9 -     62418 A---T--------GAT----G----C-TT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23220  9 +     24253 A---T--------GAT----G----C-TT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43041  9 +     59329 A---T--------GAT----G----C-TT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268969  9 +    668171 A---T--------GAT----G----C-TT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20155  9 +     21031 A---T--------GAT----G----C-TT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  752  9 +     17132 A---T--------GAT----G----C-TT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221482  9 -    270270 A---T--------GAT----G----T-TT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320252  9 +  24302211 A---T--------GAT----G----C-TT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355084  9 -    752769 A---T--------GAT----G----C-TT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671780  8 -    737560 ---------------TGA-TG----T-TT
i Manis_javanica.JSZB01003497.1                          I 1 I 21
s Manis_pentadactyla.KN006162.1                             219069  8 +    317179 ---------------tga-TG----T-TT
i Manis_pentadactyla.KN006162.1                          I 1 I 21
s Marmota_marmota.CZRN01000018.1                           7499225  9 +  40650429 g---t--------gaT----G----T-TT
i Marmota_marmota.CZRN01000018.1                         C 0 I 20
s Megaderma_lyra.MegLyr_scaffold_4542                       148683  9 +    207569 A---T--------GCT----G----T-TT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24238  8 -     74585 ---------------TGA-TG----T-AT
i Mellivora_capensis.MelCap_flattened_line_19308         I 1 I 31
s Meriones_unguiculatus.MerUng_scaffold_7390                 46876  9 -    140813 G---T--------GAT----G----T-TT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 10 C 0
s Mesocricetus_auratus.KB708134.1                         17427523  9 +  29670104 G---T--------GAT----G----T-TT
i Mesocricetus_auratus.KB708134.1                        I 10 C 0
s Mico_argentatus.k141_582562                                 8119  9 +     17804 A---C--------GAT----G----T-TT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8903  9 -     12984 A---C--------GAT----G----T-TT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16854  9 -     26561 A---C--------GAT----G----T-TT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982847  9 +  93316391 A---T--------GAC----A----T-TT
i Microcebus_murinus.CM007674.1                          I 4 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43240  9 +    145209 A---T--------GAT----G----T-TT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182899  9 +    200668 A---C--------GGC----A----C-TT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960668  9 +  27267610 G---T--------GAT----G----T-TT
i Microtus_ochrogaster.CM001695.1                        I 10 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361014  9 -   8254450 A---T--------GGT----G----T-TT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39915  9 -     48117 A---T--------GGT----G----T-TT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20279  9 -     27822 A---T--------GAT----G----C-TT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6751  8 +     27589 ---------------TGA-TG----T-AT
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 1 I 21
s Mirza_zaza.k141_766280                                     50638  9 -     62432 A---T--------GAC----A----T-TT
i Mirza_zaza.k141_766280                                 I 4 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177053  9 +    366855 T---T--------GGT----G----T-TT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16776  8 -     63510 ---------------TGA-TG----T-GC
i Mungos_mungo.MunMun_flattened_line_18455               I 1 I 21
s Murina_feae.MurFea_scaffold_17764                          36929  9 +     47283 G---T--------GGT----C----T-TT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   4951  9 +      5579 g---t--------gat----G----T-TT
i Mus_caroli.FMAL02030609.1                              I 10 C 0
s Mus_musculus.chr8                                       41685654  9 + 129401213 G---T--------GAT----G----T-TT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39494972  9 + 130317789 g---t--------gAT----G----T-TT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80771  9 -     86153 G---T--------GAT----G----T-TT
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 10 C 0
s Mustela_putorius.JH418006.1                             14353390  8 +  14710649 ---------------TGA-TG----T-AT
i Mustela_putorius.JH418006.1                            I 1 I 31
s Myotis_brandtii.KE162005.1                               9790974  9 +  10118263 a---t--------ggt----G----T-TT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385336  9 +   6019432 a---t--------ggT----G----T-TT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381156  9 +   4330536 a---t--------ggt----G----T-TT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3715  9 +      3929 A---T--------GGT----G----T-TT
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 I 64
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117819  9 +    130748 A---T--------GAT----G----T-TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26860  9 +     34575 A---T--------GAT----G----C-TT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467343  8 -  31847680 ---------------TGA-TG----T-AT
i Neomonachus_schauinslandi.NINY01007730.1               I 1 I 21
s Noctilio_leporinus.NocLep_scaffold_7894                   125863  9 -    149072 A---T--------GGT----G----T-TT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51586  9 -    132029 A---T--------GAT----G----C-TT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7681  9 -     16345 A---T--------GAT----G----C-TT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13566  9 +     22201 A---T--------GAT----G----C-TT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411850  9 -  22158432 A---T--------GAT----G----C-TT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23964  9 -     54323 A---T--------GAT----G----C-TT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196494  8 +   9404916 ---------------tga-aa----t-at
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 I 21
s Nycticebus_bengalensis.LG01                             93634613  9 + 196305487 G---T--------GAC----G----T-TT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1371  9 -      3937 G---T--------GAC----G----T-TT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562852  9 - 199412804 G---T--------GAC----G----T-TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549500  9 -   3988456 A---T--------GAT----A----T-TT
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Octodon_degus.JH651603.1                                11045746  9 -  11899542 G---T--------GAT----G----G-TT
i Octodon_degus.JH651603.1                               I 3 I 16
s Odobenus_rosmarus.KB229312.1                             1449939  8 +   2017862 ---------------TGA-TG----T-AT
i Odobenus_rosmarus.KB229312.1                           I 1 I 21
s Ondatra_zibethicus.OndZib_scaffold_7387                    91032  4 -    140218 --------------------G----T-TT
i Ondatra_zibethicus.OndZib_scaffold_7387                I 8 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105464  9 +    107918 G---T--------GAT----G----T-TT
i Onychomys_torridus.OnyTor_scaffold_2487                I 10 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11609  9 -     14239 A---T--------GAT----G----T-TT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107101966  9 - 174332312 A---C--------GAT----A----T-TT
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                        37531  8 +    559221 ---------------taa-ta----t-at
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 I 21
s Otolemur_crassicaudatus.k141_649260                        37995  9 -     51505 G---T--------GAC----G----T-TT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             350998  9 +   1103335 G---T--------GGC----G----T-TT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.NBAG03003182.1                              9860 10 -     24457 A---T--------GAT----G----CTTT
i Pan_troglodytes.NBAG03003182.1                         I 388 I 75
s Panthera_onca.PanOnc_flattened_line_3271                   22696  8 -    230217 ---------------TGA-TG----T-GT
i Panthera_onca.PanOnc_flattened_line_3271               I 1 I 21
s Panthera_pardus.KV860321.1                              18460022  8 -  18783137 ---------------TGA-TG----T-GT
i Panthera_pardus.KV860321.1                             I 1 I 21
s Panthera_tigris.KE722367.1                               3970742  8 +   8748460 ---------------tga-tg----T-GT
i Panthera_tigris.KE722367.1                             I 1 I 21
s Papio_anubis.CM001495.2                                   241092  9 - 183742232 A---T--------GAT----G----C-TT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7556  9 +     21308 A---T--------GAT----G----C-TT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288595  9 -  20919399 A---T--------GAT----G----C-TT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20211  9 -     27687 A---T--------GAT----G----C-TT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13347  9 +     16796 A---T--------GAT----G----C-TT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20157  9 -     23640 A---T--------GAT----G----C-TT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13339  5 +     78924 ---------------T----G----T-GT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 I 21
s Perodicticus_ibeanus.k141_1921260                          24279  9 +     31479 G---T--------GAT----G----T-TT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16638  9 -     24908 G---T--------GAT----G----T-TT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37754  9 +     38305 T---T--------CTT----G----T-TT
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 I 59
s Peromyscus_maniculatus.KI615324.1                         245094  9 +  18517816 A---T--------GAT----G----T-TT
i Peromyscus_maniculatus.KI615324.1                      I 10 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30203  9 -     56120 G---T--------GAT----G----A-TT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 11
s Piliocolobus_badius.k141_2704958                             375  9 +     55023 A---T--------GAT----G----C-TT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             376  9 +     40849 A---T--------GAT----G----C-TT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252124  9 +  14605196 A---T--------GAT----G----C-TT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1099  9 +     22231 A---T--------GGC----G----T-TT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63126  9 +    207309 C---C--------GAT----G----T-TT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4220  9 -     25401 C---C--------GAT----G----T-TT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29961  9 +     58159 C---C--------GAT----G----T-TT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30237  9 +     63561 C---C--------GAT----G----T-TT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30000  9 +     51148 C---C--------GAT----G----T-TT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554967  9 -   4542175 C---C--------GAT----G----T-TT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29984  9 +     51125 C---C--------GAT----G----T-TT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6391  9 +     39866 C---C--------GAT----G----T-TT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1476  9 -      9282 C---C--------GAT----G----T-TT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40880  9 -     87950 C---C--------GAT----G----T-TT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41273  9 -     88961 C---C--------GAT----G----T-TT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5972  9 -     39403 C---C--------GAT----G----T-TT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40924  9 +     87928 C---C--------GAT----G----T-TT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5969  9 -     60166 C---C--------GAT----G----T-TT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12905  9 -     67232 C---C--------GAT----G----T-TT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40821  9 -     90634 C---C--------GAT----G----T-TT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42289  9 +     89403 C---C--------GAT----G----T-TT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175819  9 - 189387572 A---T--------GAT----G----C-TT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190637  9 -   9816681 A---T--------GAT----G----C-TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25474  9 +     69807 A---T--------GAT----G----C-TT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42669  9 -     80239 A---T--------GAT----G----C-TT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980862  9 +   4620579 A---T--------GAC----A----T-TT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564330  9 -   2598838 a---t--------gac----A----T-TT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1966  9 -      7103 A---T--------GAC----A----T-TT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2563  9 -     11706 A---T--------GAC----A----T-TT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6299  9 -     30655 A---T--------GAC----A----T-TT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32624  9 +     46564 A---T--------GAC----A----T-TT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92895  9 -     98465 G---T--------GAC----A----T-TT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6532  9 +     35169 A---T--------GAC----A----T-TT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34420  9 +     52041 G---T--------GAT----G----T-TT
i Psammomys_obesus.NESX01036366.1                        I 10 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2955  8 -     18639 ---------------TGA-TG----T-AT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 1 I 31
s Pteropus_alecto.KB030862.1                               5839111  9 -  28871421 A---T--------GAT----A----T-TT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535677  9 -   4952924 A---T--------GAT----A----T-TT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097339  8 +  38429054 ---------------TGA-TG----T-GT
i Puma_concolor.QAVW01001104.1                           I 1 I 21
s Pygathrix_cinerea.k141_1153803                             24884  9 +     91421 A---T--------GAT----G----C-TT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151377  9 -   7812017 A---T--------GAT----G----C-TT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5754  9 +     72585 A---T--------GAT----G----C-TT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020865  9 -  90668790 G---T--------GAT----G----G-TT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913073  9 +   3329780 a---t--------aat----g----t-tt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26694  9 +     27361 A---T--------GAT----G----C-TT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120061  9 + 195417433 A---T--------GAT----G----C-TT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234302  9 -   7961872 A---T--------GAT----G----C-TT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73093  9 -    116970 A---T--------GAT----A----T-TT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2049  9 +     27962 A---C--------GAT----G----T-TT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2057  9 +      6077 A---C--------GAT----G----T-TT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2094  9 +      5971 A---C--------GAT----G----T-TT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2148  9 +      5932 A---C--------GAT----G----T-TT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               331  9 -      4390 A---C--------GAT----G----T-TT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389397  9 - 209938924 A---C--------GAT----G----T-TT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2096  9 +      5979 A---C--------GAT----G----T-TT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2444  9 -      4301 A---C--------GAT----G----T-TT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236552  8 +   5703754 A---T--------GA-----G----T-TT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6142  8 +     21866 A---T--------GA-----G----T-TT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114291  4 +    313613 --------------------G----T-TT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 I 11
s Semnopithecus_entellus.k141_158471                         23201  9 +     27374 A---T--------GAT----G----C-TT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26720  9 +     58920 A---T--------GAT----G----C-TT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13216  9 -     45317 A---T--------GAT----G----C-TT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20874  9 -     42441 A---T--------GAT----G----C-TT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23554  9 -     29113 A---T--------GAT----G----C-TT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26623  9 -     48123 A---T--------GAT----G----C-TT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46958  9 +     77746 G---C--------AAC----C----T-CT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856610  4 -   1910179 --------------------G----A-TT
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 I 11
s Spermophilus_dauricus.KZ294078.1                         1866583  9 +   3870691 G---T--------GAT----G----T-TT
i Spermophilus_dauricus.KZ294078.1                       I 10 I 20
s Spilogale_gracilis.SpiGra_flattened_line_13525              4763  8 -     97271 ---------------C-ACTG----T-GT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 I 20
s Suricata_suricatta.SurSur_flattened_line_6629             123183  8 +    196729 ---------------TGA-TG----A-GC
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Symphalangus_syndactylus.tarseq_199                       389123  9 +   1523678 A---T--------GAT----G----C-TT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11919  9 +     22964 A---T--------GGT----G----T-TT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 939  9 +      5583 A---T--------GAT----G----T-TT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189849  8 +    199430 ---------------TGA-TG----T-TT
i Tapirus_indicus.TapInd_scaffold_7432                   I 1 I 21
s Tapirus_terrestris.TapTer_scaffold_755                    103803  8 -    539355 ---------------TGA-TG----T-TT
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 I 21
s Tarsius_lariang.k141_1780720                                5164  9 +      6850 A---T--------GAT----G----T-AT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5205  9 +     20590 A---T--------GAT----G----T-AT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351078  9 - 186847797 A---T--------GAT----G----C-TT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22535  9 -     33621 G---T--------GAT----G----A-CT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 3 I 11
s Tolypeutes_matacus.TolMat_scaffold_31955                   18062  9 -     31044 A---T--------GAT----G----T-TT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 41
s Tonatia_saurophila.TonSau_scaffold_294                    477960  9 -    610378 A---T--------GGC----G----T-TT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 5
s Trachypithecus_auratus.k141_1189070                        18765  9 +     26378 A---T--------GAT----G----C-TT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31429  9 -     78344 A---T--------GAT----G----C-TT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18086  9 +     25722 A---T--------GAT----G----C-TT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26311  9 -     62838 A---T--------GAT----G----C-TT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26428  9 +     46913 A---T--------GAT----G----C-TT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7234  9 -     28527 A---T--------GAT----G----C-TT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28250  9 -     64340 A---T--------GAT----G----C-TT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26287  9 -     63452 A---T--------GAT----G----C-TT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7730  9 +     22490 A---T--------GAT----G----C-TT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1158  9 -      6147 A---T--------GAT----G----C-TT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8132  9 -     13050 A---T--------GAT----G----C-TT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253371  9 -   6242583 A---T--------GAT----G----C-TT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59122  9 +     59866 A---T--------GAT----G----C-TT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832378  9 -   4065304 T---T--------GAT----G----T-TT
i Tupaia_chinensis.KB320699.1                            I 229 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6691  9 -     70247 A---T--------GAT----G----T-TT
i Tupaia_tana.TupTan_flattened_line_394                  I 265 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     494  4 -     21056 --------------------G----T-TT
i Uropsilus_gracilis.UroGra_scaffold_46687               I 5 I 11
s Ursus_maritimus.KK499267.1                                180107  8 +   5085361 ---------------TGA-TG----T-GT
i Ursus_maritimus.KK499267.1                             I 1 I 21
s Varecia_rubra.k141_787544                                  23507  9 -     30710 A---T--------GAC----A----T-TT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22414  9 -    147434 A---T--------GAC----A----T-TT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103253  8 -    112863 ---------------TGA-TA----T-AT
i Vulpes_lagopus.VulLag_flattened_line_12041             I 1 I 21
s Xerus_inauris.XerIna_scaffold_2302                        172357  9 -    224448 G---T--------GAT----G----C-TT
i Xerus_inauris.XerIna_scaffold_2302                     I 10 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27137  8 -     86975 ---------------TGA-TG----T-AT
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 I 21
s Zapus_hudsonius.ZapHud_scaffold_230229                      1600 17 +      2695 T---TACTATGTAGGT----G----T-AT
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 3 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Pteronotus_parnellii.KE847780.1                            50132  0 -     66298 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786  8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3335 74 +     36723 CAGTA------GGAG------TC-CC----------------------CAGT------GT-TTGGGGGACTCCTACTCTT--G--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--G--T--ATAATATTT----AT--T-------------T---T
s Acinonyx_jubatus.LLWD01001279.1                           811105 23 +   1699592 ---------------------------------------------------------------GG---------------CAAAAGACT---ATC---C-----------ATC-------CCT-C------------C------------------------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        I 21 I 11
s Acomys_cahirinus.AcoCah_scaffold_21377                     18134 63 +     63021 CATGA------GTAG------AC-TA----------------------TAAT------AT-TTGA---------------TAAAAGAGA---AGA---C-----------AAG-------G-T-C------------CATAT--A--C--ACAGCCTTT----CT--T-------------T---T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413623 45 +  29979442 ---------------------------------------------------------------GG---------------CAAAAGACTACTACC---C-----------ATC-------CCT-C------------CAAAT--A--C--GTAACA--T----CC--G-------------TT--T
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 21 C 0
s Ailurus_fulgens.LNAC01001112.1                            213732 44 +    347723 ---------------------------------------------------------------AC---------------CAAAAGACT---ATC---C-----------ATC-------CCT-C------------CAAAT--A--T--Gtaacattt----cc--t-------------t--tt
i Ailurus_fulgens.LNAC01001112.1                         I 21 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16244 67 -     61208 ATTTCAGGAGAAG--------AG-CA----------------------CGGT------GT-TTGG---------------TGAAAGGGC---AGT---C-----------AAC-------C-T-T------------GCTAT--A--T--ATAACATTT----CT--T-------------T---T
i Allactaga_bullata.AllBul_scaffold_20030                I 2 I 1
s Allenopithecus_nigroviridis.k141_3755588                   45741 63 +     53615 CAATA------GGAG------CC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--TTACCATGT----AT--T-------------T---T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41681 63 +     44087 CAATA------GGAG------CC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14321 62 -     21945 CAATA------GGAG------CC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CGAGT--G--T--CTACCATGT----AT--T-------------T----
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         15997 63 +     32033 CAATA------GGAG------CC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CGAGT--G--T--CTGCCATGT----AT--T-------------T---T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70445 61 -     84148 CAGTC------GGAG------TC-CC----------------------CAAT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42678 61 -     78289 CAGTC------GGAG------TC-CC----------------------CAAT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42124 61 +     55831 CAGTC------GGAG------TC-CC----------------------CAAT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40565 61 -     64179 CAGTC------GGAG------TC-CC----------------------CAAT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22212 61 -     24835 CAGTC------GGAG------TC-CC----------------------CAAT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39195 61 +     45454 CAGTC------GGAG------TC-CC----------------------CAAT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44893 61 +     70886 CAGTC------GGAG------TC-CC----------------------CAAT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7018 61 +     30854 CAGTC------GGAG------TC-CC----------------------CAAT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31157 61 +     42133 CAGTC------GGAG------TC-CC----------------------CAAT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174936 63 -    412891 CAGTG------GGAG------AT-TC----------------------CAGT------GT-TTTG---------------GAGAAGACT---AGT---C-----------ATC-------CCT-T------------CCAAT--G--T--ATAATG-TT----CC--T-------------T---T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   48967 61 -     65372 CAGTT------GGAG------TC-CC----------------------CAAT------GT-TTGG---------------CAA--GGGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42714 61 +     43593 CAGTC------GGAG------TC-CC----------------------CAAT------GT-TTGG---------------CAA--GGGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670727 61 +   5030052 CAGTC------GGAG------TC-CC----------------------CAAT------GT-TTGG---------------CAA--GGGT---AAC---C-----------AAG-------C-T-C------------TGAAt--g--t--attccattt----ct--t-------------t---t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22369 61 -     23494 CAGTT------GGAG------TC-CC----------------------CAAT------GT-TTGG---------------CAA--GGGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7505 61 +      8415 CAGTT------GGAG------TC-CC----------------------CAAT------GT-TTGG---------------CAA--GGGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14277 63 -     32367 TAGAA------AGAG------AA-CA----------------------CAAT------CT-TTGG---------------CAAAATAGA---AGC---T-----------AAA-------C-T-C------------CAAAT--G--C--ATAACATTT----CT--T-------------T---T
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 1 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3222 64 -     15198 CAGTG------GGAG------AT-TC----------------------CAGT------GT-TTTG---------------GAGAAGACT---AGC---C-----------ATC-------CCT-T------------CAAAT--G--T--ATAATGTTT----CT--A-------------T---T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               272957 61 +  21539123 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGGAT--G--T--ATTCCATTT----CT--T-------------T---T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9124 61 +     48076 CAGTC------GGAG------TG-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGGAT--G--T--ATTCCATTT----CT--T-------------T---T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4261 61 -     28759 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGGAT--G--T--ATTCCATTT----CT--T-------------T---T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31814 61 +     44353 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGGAT--G--T--ATTCCATTT----CT--T-------------T---T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47185 61 -     71267 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGGAT--G--T--ATTCCATTT----CT--T-------------T---T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21244 61 -     33135 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGT---C-----------AAG-------C-T-C------------TGGAT--G--T--ATTCCATTT----CT--T-------------T---T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4455 62 +     11645 CAGTA------GGGG------AT-CC----------------------CAAT------GT-TT-G---------------CAAAAGAGT---AAC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAACATTT----CT--T-------------T---T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4461 62 -     19611 CAGTA------GGGG------AT-CC----------------------CAAT------GT-TT-G---------------CAAAAGAGT---AAC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAACATTT----CT--T-------------T---T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6148 61 +     28062 CAGTC------GGAG------TT-CC----------------------CAGT------GC-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--A--ATTCCATTT----CT--T-------------T---T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41442 61 -     91139 CAGTC------GGAG------TT-CC----------------------CAGT------GC-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--A--ATTCCATTT----CT--T-------------T---T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  18968 61 +     95584 CAGTC------GGAG------TT-CC----------------------CAGT------GC-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--A--ATTCCATTT----CT--T-------------T---T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18881 61 +    119600 CAGTC------GGAG------TT-CC----------------------CAGT------GC-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--A--ATTCCATTT----CT--T-------------T---T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8356 60 +     18648 CAGTC------TGAG------TC-CC----------------------TGCT------GT-TTGG---------------CAG--GAGT---AGC---C-----------GAG-------C-T-C------------TGAAT--G--T--ATTCCGTTT----C---T-------------T---T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8017 60 -     13885 CCGTC------GGAG------TC-CC----------------------CACC------GT-TTGG---------------CAG--GAGT---AGC---C-----------AAG-------C-T-C------------TGAGC--G--T--ACTTCATTT----C---T-------------T---T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16717 60 +     17162 CAGTC------AGAG------TC-CC----------------------CACT------GT-TTGG---------------CAG--GGGT---AGC---C-----------GAG-------C-T-C------------TGAAT--G--T--ATTCCGTTT----C---T-------------T---T
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451672 60 + 189096842 CAGTC------AGAG------TC-CC----------------------CACT------GT-TTGG---------------CAG--GGGT---AGC---C-----------GAG-------C-T-C------------TGAAT--G--T--ATTCCGTTT----C---T-------------T---T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              17965 60 -     18408 CAGTC------AGAG------TC-CC----------------------CACT------GT-TTGG---------------CAG--GGGT---AGC---C-----------GAG-------C-T-C------------TGAAT--G--T--ATTCCGTTT----C---T-------------T---T
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503652 44 +  60362399 ---------------------------------------------------------------GG---------------CAAAAGACT---ACC---T-----------ATC-------TCT-C------------CAAAT--G--T--GTAACCTTT----CC--T-------------TT--T
i CanFam4.chr16                                          I 21 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7288 44 -     23171 ---------------------------------------------------------------GG---------------CAAAAGACT---ACC---T-----------ATC-------TCT-C------------CAAAT--G--T--GTAACCTTT----CC--T-------------TT--T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 21 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220631 44 +   9314153 ---------------------------------------------------------------GG---------------CAAAAGACT---ACC---T-----------ATC-------TCT-C------------CAAAT--G--T--Gtaaccttt----cc--t-------------t--tt
i Canis_lupus_dingo.QKWQ01000480.1                       I 21 C 0
s Canis_lupus_familiaris.chr16                            41613766 44 +  59632846 ---------------------------------------------------------------GG---------------CAAAAGACT---ACC---T-----------ATC-------TCT-C------------CAAAT--G--T--Gtaaccttt----cc--t-------------t--tt
i Canis_lupus_familiaris.chr16                           I 21 C 0
s Canis_lupus_orion.HG994398.1                            45105347 44 -  63665305 ---------------------------------------------------------------GG---------------CAAAAGACT---ACC---T-----------ATC-------TCT-C------------CAAAT--G--T--Gtaaccttt----cc--t-------------t--tt
i Canis_lupus_orion.HG994398.1                           I 21 C 0
s Carlito_syrichta.NW_007259797.1                           268494 50 +    496798 ------------------------------------------------CAAT------GT-TTGG---------------CAAAAGAGT---AGC---T-----------AAA-------C-T-T------------TGAAA--G--T--ATAACATTT----CT--C-------------T---T
i Carlito_syrichta.NW_007259797.1                        I 13 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3527 51 +      5315 ------------------------------------------------CAGT------GT-TTTG---------------GAGAAGACT---AGT---C-----------ATC-------CCT-T------------CAAAT--T--T--ATAATAGTT----CC--T-------------T---T
i Carollia_perspicillata.CarPer_scaffold_170178          I 13 C 0
s Cavia_aperea.AVPZ01000300.1                              4994229 47 +  23392119 ---------------------------------------------------T------GT-ATGG---------------CACAAGAAT---TGT---C-----------AAG-------C-T-C------------CAAAT--G--T--ATAatactt----ct--t-------------t---t
i Cavia_aperea.AVPZ01000300.1                            I 16 I 1
s Cavia_porcellus.DS562891.1                               4997671 47 +  23407841 ---------------------------------------------------T------GT-ATGG---------------CACAAGAAT---TGT---C-----------AAG-------C-T-C------------CAAAT--G--T--ATAatactt----ct--t-------------t---t
i Cavia_porcellus.DS562891.1                             I 16 I 1
s Cavia_tschudii.CavTsc_scaffold_23560                       60772 47 -     66877 ---------------------------------------------------T------GT-ATGG---------------CACAAGAAT---TGT---C-----------AAG-------C-T-C------------CAAAT--G--T--ATAATACTT----CT--T-------------T---T
i Cavia_tschudii.CavTsc_scaffold_23560                   I 16 I 1
s Cebuella_niveiventris.k141_592277                           3249 60 -     12580 CAGTC------TGAG------TC-CC----------------------TGCT------GT-TTGG---------------CAG--GAGT---AGC---C-----------GAG-------C-T-C------------TGAAT--G--T--ATTCCGTTT----C---T-------------T---T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41135 59 +     53515 CAGTC------TGAG------TC-CC----------------------TGCT------GT-TTGG---------------CAG--GAGT---AGC---C------------AG-------C-T-C------------TGAAT--G--T--ATTCCGTTT----C---T-------------T---T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369341 61 -  26074798 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6230 61 -     34880 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65325 61 -     89041 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          458 63 -      5494 CAGTA------GAAG------AT-CC----------------------CAAT------GT-TTGG---------------CAAAAGAGT---AGC---T-----------AAA-------C-T-T------------TGAAA--G--T--ATAACATTT----CT--C-------------T---T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490427 44 -  27778364 ---------------------------------------------------------------GA---------------CAAAAGACT---AAC---C-----------ATC-------CCT-C------------CAAAT--G--T--GTAACATTT----CC--T-------------TT--T
i Ceratotherium_simum.JH767749.1                         I 21 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17260 44 +     27315 ---------------------------------------------------------------GA---------------CAAAAGACT---AAC---C-----------ATC-------CCT-C------------CAAAT--G--T--GTAACATTT----CC--T-------------TT--T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 21 C 0
s Cercocebus_atys.KQ010504.1                                138920 63 -   4669795 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42660 63 +     47900 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42493 63 -     44860 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42476 63 -    148725 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9733 63 -     17524 CAATA------GGAG------CC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25455 63 -     34525 CAATA------GGAG------CC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29932 63 -     45857 CAATA------GGAG------CC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23424 63 +     70610 CAATA------GGAG------CC-CC----------------------CAGT------GT-TTGG---------------CGAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGC--G--T--CTACCATGT----AT--T-------------T---T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20349 63 +     36323 CAATA------GGAG------CC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11051 76 -     19938 CAATA------GGAG------AC-CA----------------------TAAT------AT-TTGG---------------CAAAAGACT---GGCTGCC-----------T--------CCCCCC---CCCGCCCCGCCCAT--A--T--ATACCATTT----CC--T-------------T---T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28889 63 -     33796 CAGTA------GGAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATGACATTT----AT--T-------------T---T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3405 63 -     15404 CAGTA------GGAG------AC-CC----------------------CTAT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATGGCATTT----CT--T-------------T---T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7231 61 -     32913 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AGG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17644 61 -     40346 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AGG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17899 61 +    216457 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AGG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17692 61 +     39636 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AGG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2060 57 +      5346 CAGGT------GGAG------TC-CC----------------------CACT------GT-TCGG---------------CAG--CAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T-----CCACGT----CT--G-------------T----
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40788 61 -    112038 CAGTC------GGAG------TT-CC----------------------CAGT------GC-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAGT--G--A--ATTCCATTT----CT--T-------------T---T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6360 61 +     34062 CAGTC------GGAG------TT-CC----------------------CAGT------GC-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAGT--G--A--ATTCCATTT----CT--T-------------T---T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341246 63 +  18827391 CAATA------GGAG------CC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7791 63 -     44032 CAATA------GGAG------CC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302571 63 - 135778131 CAATA------GGAG------CC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407006 62 -   2368649 CAATA------GGAG------TC-CC----------------------CAGC------GT-TTGG---------------CAGAAGAGT---AGC---C-----------GAA-------G-T-C------------TGAGT--G--T--CTGCCACGT----AT--T-------------T----
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376884 62 - 200372422 CAATA------GGAG------TC-CC----------------------CAGC------GT-TTGG---------------CAGAAGAGT---AGC---T-----------GAA-------G-T-C------------TGAGT--G--T--CTTCCACGT----AT--T-------------T----
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                431 62 -     84244 CAATA------GGAG------TC-CC----------------------CAGC------GT-TTGG---------------CAGAAGAGT---AGC---C-----------GAA-------G-T-C------------TGAGT--G--T--CTGCCACGT----AT--T-------------T----
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805515 42 +  53390261 -------------------------------------------------------------TCAA---------------CAAAACTCT---AGC---C-----------ATT-------TAT-C------------TTCAA--T--T--ATaac--tt----cc--c-------------t----
i Condylura_cristata.JH655891.1                          I 15 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505           997 64 -      8242 CAGTG------GGAG------AG-TC----------------------CAGT------GT-TTGA---------------CCAAAGACG---AGC---C-----------ATC-------CTT-C------------CAAAT--G--T--GTAACATTT----CC--C-------------T---T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40515 63 -     83289 CACAG------GAAG------AC-TA----------------------CAGT------AT-TTGA---------------TGAAAGATG---AGA---C-----------AAG-------G-T-C------------CATAT--A--T--ATAACATTT----TT--T-------------T---T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 1
s Cricetulus_griseus.LT883664.1                          213112979 61 - 224834208 CATGA------GGCA------AC-AA----------------------CAAT------AT-TTGA---------------TGAAAGATG---AGA---C-----------AAA-------C-T-C------------CCTAT--G--T--ATAGCATTT----CT--C------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2566 23 +     87169 ---------------------------------------------------------------GG---------------CAAAAGACT---TTC---C-----------ATC-------CCT-C------------C------------------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 21 I 10
s Ctenodactylus_gundi.CteGun_scaffold_65                    643015 63 -   1526836 CAGGA------TGGA------AC-CT----------------------CAAC------AT-GTAG---------------CAAAAATGT---AGC---C-----------CAA-------G-T-T------------CAAAT--G--T--ATGGCATTA----CT--T-------------T---T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3263 39 +     50838 ---------------------------------------------------T------GT-ATGG---------------CAAAAGAAC---AGT---C-----------AAA-------C-T-T------------AAAAT--G--T--GTGGTA------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 16 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1846 52 +     36344 ---------------------------------------------------TCTCAATAT-ATGG---------------CAAA-GAAT---AAT---T-----------AAA-------C-T-C------------CAAGT--G--T--ACAGTATTT----CC--T-------------T---T
i Cuniculus_paca.CunPac_flattened_line_7025              I 10 I 1
s Dasypus_novemcinctus.JH564415.1                          2108378 87 -   2246927 CAATA------AGAG------AC-CA----------------------TAAT------AT-TTGG---------------AAAAAGATT---GGctccc-----------tttccccgcccctccccaccccccactccagt--A--T--ATACCATTT----CC--T-------------T---T
i Dasypus_novemcinctus.JH564415.1                        C 0 I 4
s Daubentonia_madagascariensis.ctg71                        290825 63 +  12879189 CAGTA------GGAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAACAGT---AGC---C-----------AAA-------C-T-C------------CAGAT--G--C--ATAACATTG----CT--T-------------T---T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11862960 63 -  20541912 CAGTG------GGAG------AC-TC----------------------CAGT------GT-T-GG---------------GAGAAGACT---AGT---C-----------ATC-------CCT-C------------CAAAC--G--T--ATAATGTTT----cc--t-------------t---t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662719 44 -   1390856 ---------------------------------------------------------------GA---------------CAAAAGACT---AAC---C-----------ATC-------CCT-C------------GAAAT--G--T--GTAACATTT----CC--T-------------TT--T
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 21 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137504 44 -    198055 ---------------------------------------------------------------GA---------------CAAAAGACT---AAC---C-----------ATC-------CCT-C------------CAAAT--G--T--GTAACATTT----CC--T-------------TT--T
i Diceros_bicornis.DicBicMic_scaffold_5955               I 21 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96729 47 -    115145 ---------------------------------------------------T------GT-ATGG---------------CAAAAGAAT---AGG---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAGTATTT----CT--T-------------T---T
i Dinomys_branickii.DinBra_scaffold_10381                I 16 I 1
s Dipodomys_ordii.KN672350.1                              18948578 76 -  37912305 tttga------gaaG------AA-AC----------------------CCAT------GC-TTGG---------------TGAAAGCAT---AGC---C-----------TAA-------T-T-T------------TACAT--G--T--ATCACACAA----CT--TGGAATATACTGCCT---T
i Dipodomys_ordii.KN672350.1                             I 9 I 1
s Dipodomys_stephensi.DipSte_scaffold_89095                   3525 76 -     10735 TTCGA------GAAG------AA-AC----------------------CCAT------GC-TTGG---------------TGAAAGCAT---AGT---C-----------TAA-------T-T-T------------TACAT--G--T--ATCACACAA----CT--TGGAATATACTGCCT---T
i Dipodomys_stephensi.DipSte_scaffold_89095              I 9 I 1
s Dolichotis_patagonum.DolPat_scaffold_80628                  8175 44 +     14636 ---------------------------------------------------T------GT-ATGG---------------CAAAAGAAT---TGT---C-----------AAA-------C-T-C------------CCAAT--G--T--AT---ACTT----CC--T-------------T---T
i Dolichotis_patagonum.DolPat_scaffold_80628             I 16 I 1
s Echinops_telfairi.JH980293.1                            62852153 67 - 111700974 GAATA------GG-T------AC-CT----------------------TAAT------GT-TGGA---------------TGAAGGACT---AGT---G-----------ATC-------CTT-C------------CAAAT--GTATATGTAACCTTT----CA--T-------------C---T
i Echinops_telfairi.JH980293.1                           C 0 I 1
s Eidolon_helvum.AWHC01266696.1                               4527 64 +     19438 CAATG------GGAG------AC-TC----------------------CAGT------GT-TTGA---------------CAAAAGGTT---AGC---C-----------ATC-------CCT-C------------TAAAT--G--T--gtaacattt----cc--t-------------t---t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914403 29 +  41312741 --------------------------------------------------------------------------------------------------------------ATC-------Act-c------------caaat--a--t--gtaaaaatt----tc--t-------------t--tt
i Enhydra_lutris.KZ291758.1                              I 31 C 0
s Elephantulus_edwardii.JH947257.1                         9105699 32 -  10337057 cagTA------GGAC------AC-CT----------------------CACT------GT-TTCA---------------TAAAAGACT-------------------------------------------------------------------------------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 N 0
s Ellobius_lutescens.LOEQ01008920.1                          29282 31 +    110024 CATAA------GGAG------AC-TA----------------------GAGT------AT-TAGA---------------TGAAAGag--------------------------------------------------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 9
s Ellobius_talpinus.LOJH01026522.1                           11258 15 +     18970 CATAA------GGAG------AC-TA----------------------GA----------------------------------------------------------------------------------------------------------------------------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 17
s Eptesicus_fuscus.JH977646.1                             12576594 64 +  14770903 CAGTG------GGAG------AC-TC----------------------CAGT------GT-TTGG---------------CAAAAGACT---AGT---T-----------ATC-------CCT-T------------CAATT--G--T--ATAACATTT----CC--T-------------T---T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039707 44 -   4378816 ---------------------------------------------------------------GG---------------CAAAAGACT---AAC---C-----------ATC-------CCT-C------------CAAAT--g--t--gtaaaattt----cc--t-------------t--tt
i Equus_asinus.JREZ01000139.1                            I 21 C 0
s Equus_caballus.CM000403.2                               21373641 44 +  39960074 ---------------------------------------------------------------GG---------------CAAAAGACT---AAC---C-----------ATC-------CCT-C------------CAAAT--g--t--gtaaaattt----cc--t-------------t--tt
i Equus_caballus.CM000403.2                              I 21 C 0
s Equus_przewalskii.KK951119.1                              410427 44 -    498745 ---------------------------------------------------------------GG---------------CAAAAGACT---AAC---C-----------ATC-------CCT-C------------CAAAT--g--t--gtaaaattt----cc--t-------------t--tt
i Equus_przewalskii.KK951119.1                           I 21 C 0
s Erythrocebus_patas.Contig38                               260769 63 +  21539334 CAATA------GGAG------CC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               12997 63 -     24895 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGTGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATGAACTTT----CT--T-------------T---C
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40709 63 -     70999 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGTGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84668 63 +    112731 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGTGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41241 63 +     68309 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGTGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51566 63 -     65740 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGTGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22196 63 -     75513 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGTGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46389 63 -     97555 CAGTA------GAAG------AC-CG----------------------CAAG------GT-TTGG---------------CAAAAGTGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3116 63 +     30972 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGTGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40839 63 -     52037 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGTGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57240 63 -    111500 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGTGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245015 23 - 206538554 ---------------------------------------------------------------GG---------------CAAAAGACT---ATC---C-----------ATC-------Cct-c------------c------------------------------------------------
i Felis_catus.CM001381.2                                 I 21 I 13
s Felis_catus_fca126.CM031415.1                          185114801 23 - 205367284 ---------------------------------------------------------------GG---------------CAAAAGACT---ATC---C-----------ATC-------Cct-c------------c------------------------------------------------
i Felis_catus_fca126.CM031415.1                          I 21 I 13
s Felis_nigripes.FelNig_flattened_line_31944                 25905 23 -     30238 ---------------------------------------------------------------GG---------------CAAAAGACT---ATC---C-----------ATC-------CCT-C------------C------------------------------------------------
i Felis_nigripes.FelNig_flattened_line_31944             I 21 I 11
s Galago_moholi.ctg3793                                     122851 62 -    137831 CAGTA------GGAG------AC-CC----------------------CAAT------GT-TTGG---------------CCAAAGAGA---AGC---C-----------AAA-------T-G-G------------C-AAC--A--T--ATAACGTTC----CT--T-------------T---T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6396 62 +     22493 CAGTA------GGAG------AC-CC----------------------CAAT------GT-TTGG---------------CCAAAGAGA---AGC---C-----------AAA-------T-G-G------------C-AAC--A--T--ATAACGTTC----CT--T-------------T---T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18448 62 -     32986 CAGTA------GGAG------AC-CC----------------------CAAT------GT-TTGG---------------CCAAAGAGA---AGC---C-----------AAA-------C-T-G------------C-AAT--G--T--ATAACGTTC----CT--T-------------T---T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17310 63 +     18121 CAATG------GGAG------AC-CC----------------------TGAT------GT-TTGG---------------CAAAAGAGA---AGC---C-----------AAA-------C-T-C------------CGAAT--G--T--ATAACATTT----CT--T-------------T---T
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32181 60 -     36801 CGGGA------GGAG------AC-CC----------------------TGAT------GT-TTAG---------------CAAAAGAGC---ACC---C-----------AAG-------A-T-T------------CAAAT--G--T--AC---ATTT----CT--T-------------T---T
i Glis_glis.GliGli_scaffold_33859                        C 0 I 1
s Gorilla_beringei.k141_3358147                               3672 76 -      8343 CAGTA------GGAG------TC-CC----------------------CAGT------GT-TTGGGGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--G--T--ATAATACTT----CT--T-------------T---T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252683 76 - 186649187 CAGTA------GGAG------TC-CC----------------------CAGT------GT-TTGGGGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--G--T--ATACTATTT----CT--T-------------T---T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11500 46 +     11903 CAGGA------GGAG------AC-CC----------------------TGAT------GT-TTAG---------------TAAAAGAGC---ATC---C-----------AAG-------C-T-C------------CAAA---------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 I 11
s Hapalemur_alaotrensis.k141_330369                          12924 63 -     40692 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34325 63 +     49394 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59194 63 -     66874 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8067 63 -     42923 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15067 63 -     53142 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925313 47 -  22651954 -------------------------------------------------------------------------------------GTGT---GGG---AAAATAATAGTCAAA-------C-T-C------------CAAAt--g--t--atagtattt----ct--t-------------t--tt
i Heterocephalus_glaber.JH602082.1                       I 11 I 1
s Helogale_parvula.HelPar_flattened_line_2585                29031 13 -    327341 CAGTA------GGAG------AT-AC----------------------------------------------------------------------------------------------------------------------------------------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 39
s Hipposideros_galeritus.HipGal_scaffold_23202               49071 64 +     49977 CAGTG------GGAA------AC-TC----------------------CAAT------GT-CTGG---------------CAAAATACT---AGC---C-----------ATC-------CCT-C------------CAAAT--G--T--GTAGCATTT----CC--T-------------T---T
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140671 76 -    630532 CAGTA------GGAG------TC-CC----------------------CAGT------GT-CTGGAGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--G--T--ATAACATTT----AT--T-------------T---T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67725 23 +     83186 ---------------------------------------------------------------GG---------------CAAAAGACT---ATG---C-----------ATT-------CCT-C------------C------------------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 21 I 10
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69609 44 +    143317 ---------------------------------------------------T------GT-ATGG---------------CAAAAGAAT---TGT---C-----------AAA-------C-T-C------------CAAAT--G--G--AT---AGTA----CT--T-------------T---T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 16 I 1
s Hylobates_agilis.k141_1155965                               3706 76 +     12352 CAGTA------GGAG------TC-CC----------------------CAGT------GT-CTGGAGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--G--T--ATAACATTT----AT--T-------------T---T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10889 76 +     55766 CAGTA------GGAG------TC-CC----------------------CAGT------GT-CTGGAGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--G--T--ATAACATTT----AT--T-------------T---T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050485 76 + 191637585 CAGTA------GGAG------TC-CC----------------------CAGT------GT-CTGGAGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--G--T--ATAACATTT----AT--T-------------T---T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799363 76 +  11177569 CAGTA------GGAG------TC-CC----------------------CAGT------GT-CTGGAGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--G--T--ATAACATTT----AT--T-------------T---T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385044 35 +   7955117 -------------------------------------------------------------------------------------AAGT---ACC---C-----------AAA-------C-T-C------------CACAT--G--T--ATAACAATT----CT--T-------------T---T
i Ictidomys_tridecemlineatus.JH393364.1                  I 20 I 2
s Indri_indri.k141_2415743                                     584 56 +     11955 -------------AG------AT-CC----------------------CAAT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAACATTT----CT--T-------------T---T
i Indri_indri.k141_2415743                               I 4 C 0
s Jaculus_jaculus.JH725527.1                               1237431 67 +   9596543 GTTTCAGGAGAAG--------AG-CA----------------------CAGT------GT-TTGG---------------TGAAAGGGC---AAT---C-----------AAG-------C-T-T------------GCTAA--g--t--attacattt----ct--t-------------t---t
i Jaculus_jaculus.JH725527.1                             I 2 I 1
s Lagothrix_lagothricha.k141_246028                          41500 46 +    110728 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G-----------------------------------------
i Lagothrix_lagothricha.k141_246028                      C 0 I 14
s Lasiurus_borealis.LasBor_scaffold_26245                    29309 64 -     49555 CAGTG------GGAG------AC-TC----------------------CAGT------GT-TTGG---------------CAAAAAACT---AGT---T-----------ATT-------CCT-T------------CAATT--G--T--ATAACATTT----CC--T-------------T---T
i Lasiurus_borealis.LasBor_scaffold_26245                C 0 I 856
s Lemur_catta.scaffold_24                                 14757715 63 +  30322482 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2165 60 -     13097 CAGTC------GGAG------TC-CC----------------------CACT------GT-TTGG---------------CAA--CAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----C---T-------------G---T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2116 60 +      5940 CAGTC------GGAG------TC-CC----------------------CACT------GT-TTGG---------------CAA--CAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----C---T-------------G---T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1750 60 -      5717 CAGTC------GGAG------TC-CC----------------------CACT------GT-TTGG---------------CAA--CAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----C---T-------------G---T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8366 60 -     11567 CAGTC------AGAG------TC-CC----------------------CACT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----C---T-------------T---T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9747 60 -     12945 CAGTC------AGAG------TC-CC----------------------CACT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----C---T-------------T---T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7244 62 +     29618 CAGTA------GGAG------AT-CC----------------------CAAT------GT-TTGG---------------CAAAAGAAT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAACAATT----T---T-------------T---T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7241 62 +     31569 CAGTA------GGAG------AT-CC----------------------CAAT------GT-TTGG---------------CAAAAGAAT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAACAATT----T---T-------------T---T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7251 63 +     24756 CAGTA------GGAG------AT-CC----------------------CAAT------GT-TTGG---------------CAAAAGAAT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAACGATT----TT--T-------------T---T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7250 62 +     16388 CAGTA------GGAG------AT-CC----------------------CAAT------GT-TTGG---------------CAAAAGAAT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAACAATT----T---T-------------T---T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811769 44 -   3914936 ---------------------------------------------------------------GG---------------CAAAAGACT---ACC---C-----------ATC-------CCT-C------------CATAT--A--t--gtaacattt----cc--t-------------t--tt
i Leptonychotes_weddellii.KB714746.1                     I 21 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16123 34 +     24238 --------------------------------------------------------------------------------------TGT---AGT---C-----------TGC-------C-T-C------------CACAT--A--A--ATCACAATT----CC--T-------------T---T
i Lepus_americanus.LepAme_scaffold_56121                 I 1 C 0
s Lophocebus_aterrimus.ctg367                               330873 63 -   1826925 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8610 62 +     19643 CAGTA------GGAG------AC-CT----------------------CAAT------GT-TTGG---------------TCAAAGTGA---AGC---C-----------AAA-------C-T-G------------C-AAT--G--T--ATAACATTC----TT--T-------------T---T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042271 62 -   6120653 CAGTA------GGAG------AC-CT----------------------CAAT------GT-TTGG---------------TCAAAGTGA---AGC---C-----------AAA-------C-T-G------------C-AAT--G--T--ATAACATTC----TT--T-------------T---T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078512 64 +  43346337 CAGTG------GGAC------AC-CC----------------------CAGT------GT-TTGA---------------CAAAAGACT---AGC---C-----------ACT-------CTT-C------------CAAGT--G--C--ATAGCATTT----CA--T-------------T---T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41612921 44 +  59628241 ---------------------------------------------------------------GG---------------CAAAAGACT---ACC---T-----------ATC-------TCT-C------------CAAAT--G--T--Gtaaccttt----cc--t-------------t--tt
i Lycaon_pictus.CM007581.1                               I 21 C 0
s Macaca_arctoides.k141_1757516                              43190 63 -     61512 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370851 63 -  60120075 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23106 63 +     30207 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20209 63 -     24934 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23058 63 +     30527 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34248 62 -     50087 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----A---T-------------T---T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44018 63 +     51645 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413187 63 - 187317192 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397410 63 +  25927173 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46574 63 -     62418 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23229 63 +     24253 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43050 62 +     59329 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----A---T-------------T---T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  268978 62 +    668171 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----A---T-------------T---T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20164 63 +     21031 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  761 63 +     17132 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221491 64 -    270270 TAATG------GGAG------AC-TC----------------------CAGT------GT-TTGA---------------CAAAAGGTT---AGC---C-----------ATC-------CCT-C------------TAAAT--G--T--GTAACATTT----CC--T-------------T---T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320261 63 +  24302211 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355093 63 -    752769 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671809 43 -    737560 ---------------------------------------------------------------GG---------------CAAAAGACT---CCC---T-----------ATC-------CCT-C------------CAAAT--G--T--gtaacattt----cc--t-------------t---t
i Manis_javanica.JSZB01003497.1                          I 21 C 0
s Manis_pentadactyla.KN006162.1                             219098 42 +    317179 ---------------------------------------------------------------GG---------------CAAAAGACT---C-C---C-----------ATC-------CCT-C------------CAAAT--G--T--gtaacattt----cc--t-------------t---t
i Manis_pentadactyla.KN006162.1                          I 21 C 0
s Marmota_marmota.CZRN01000018.1                           7499254 35 +  40650429 -------------------------------------------------------------------------------------AGGT---ACC---C-----------AAA-------C-T-C------------CAGTT--G--T--ACAACAATT----CT--T-------------T---T
i Marmota_marmota.CZRN01000018.1                         I 20 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                       148692 64 +    207569 CAGTG------GGAG------AC-TC----------------------CAGT------GT-TCAG---------------TGAAAGACT---AGC---C-----------TTC-------CCT-C------------CAATT--G--T--GTAACATTT----CC--T-------------T---T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24277 29 -     74585 --------------------------------------------------------------------------------------------------------------ATC-------ACT-C------------CAAAT--A--T--GTAAAATTT----TC--T-------------TT--T
i Mellivora_capensis.MelCap_flattened_line_19308         I 31 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46885 63 -    140813 CTTGA------GGAG------AC-AA----------------------TAAT------AT-TTGA---------------TGAAAGAGG---AGA---C-----------AAG-------C-T-C------------CATAT--A--C--ATAGCATTT----CT--T-------------T---T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 1
s Mesocricetus_auratus.KB708134.1                         17427532 61 +  29670104 CATGA------GGCG------AC-AA----------------------CAAT------AT-TCGA---------------TGAAAGATG---AGA---C-----------AAG-------C-T-C------------AATAT--G--T--ACAGCATGT----CT--T------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 2
s Mico_argentatus.k141_582562                                 8128 60 +     17804 CAGTC------TGAG------TC-CC----------------------TGCT------GT-TTGG---------------CAG--GAGT---AGC---C-----------GAG-------C-T-C------------TGAAT--G--T--ATTCCGTTT----C---T-------------T---T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8912 60 -     12984 CAGTC------TGAG------TC-CC----------------------TGCT------GT-GTGG---------------CAG--GAGT---AGC---C-----------GAG-------C-T-C------------TGAAT--G--T--ATTCCGTTT----C---T-------------T---T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16863 60 -     26561 CAGTC------TGAG------TC-CC----------------------TGCT------GT-GTGG---------------CAG--GAGT---AGT---C-----------GAG-------C-T-C------------TGAAT--G--T--ATTCCGTTT----C---T-------------T---T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982856 63 +  93316391 CAGTA------GGAG------AC-CC----------------------CAAT------GT-TTGC---------------CAAAAGAGT---GGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAcatct----ct--t-------------t---t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43249 48 +    145209 TCATA------GGAT------AC-CT----------------------CAAC------GC-TTGA---------------TGAAGGACC---AGT---C-----------ATC-------CTT-C------------CAAGC--------------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 18
s Micronycteris_hirsuta.MicHir_scaffold_2233                182908 64 +    200668 CAGCG------GGAG------AT-CA----------------------CAGT------GT-TTTG---------------GAGAAGACT---AGT---C-----------ACC-------CCT-T------------CAAAT--G--T--GTAATGTTT----CC--T-------------T---T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960677 31 +  27267610 CATAA------GGAG------AC-TA----------------------CAGT------AT-TAGA---------------TGAAAGag--------------------------------------------------------------------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 9
s Miniopterus_natalensis.LDJU01000034.1                    6361023 64 -   8254450 CAATG------GGAG------AC-GC----------------------CAGT------GT-TTGG---------------CAAAAGACT---AGC---T-----------GTC-------CCT-T------------CAAAA--g--t--ataacattt----cc--t-------------t---t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39924 64 -     48117 CAATG------GGAG------AC-GC----------------------CAGT------GT-TTGG---------------CAAAAGACT---AGC---T-----------GTC-------CCT-T------------CAAAA--G--T--ATAACATTT----CC--T-------------T---T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20288 63 -     27822 CAATA------GGAA------CC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6780 44 +     27589 ---------------------------------------------------------------GG---------------CAAAAGACT---ACC---C-----------ATC-------CCT-C------------CATAT--A--T--GTAACATTT----CC--T-------------TT--T
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 21 C 0
s Mirza_zaza.k141_766280                                     50647 63 -     62432 CAGTA------GGAG------AC-CC----------------------CAAT------GT-TTGC---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAACATCT----CT--T-------------T---T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177062 64 +    366855 CAGTG------GGAG------AT-TC----------------------CAGT------GT-TTGG---------------CAAAAGACT---AGT---C-----------ATC-------CCT-T------------CAAAC--A--G--GTATCATTT----CC--T-------------T---T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16805 11 -     63510 ---------------------------------------------------------------GG---------------CAAAAGATT-------------------------------------------------------------------------------------------------
i Mungos_mungo.MunMun_flattened_line_18455               I 21 I 20
s Murina_feae.MurFea_scaffold_17764                          36938 64 +     47283 CAGTG------GGAG------AC-TC----------------------CAGT------GT-TTGG---------------CAAAAGACT---AGT---T-----------ATC-------CCT-T------------CAATT--G--T--ATAACATTT----CC--T-------------T---T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   4960 63 +      5579 AATGA------GGAG------AC-TA----------------------CAGT------AT-TTGA---------------TGAAAGATG---AGA---C-----------ATG-------C-T-C------------TATAT--A--G--ATTGGATTT----CT--T-------------T---T
i Mus_caroli.FMAL02030609.1                              C 0 I 1
s Mus_musculus.chr8                                       41685663 63 + 129401213 AATGA------GGAG------AC-TA----------------------CAGT------TT-TTGA---------------TGAAAGATG---AGA---C-----------ATG-------C-T-C------------TATAT--A--G--ATTGGATTT----CT--T-------------T---T
i Mus_musculus.chr8                                      C 0 I 1
s Mus_spretus.CM004101.1                                  39494981 63 + 130317789 AATGA------GGAG------AC-TA----------------------CAGT------AT-TTGA---------------TGAAAGATG---AGA---C-----------ATG-------C-T-C------------TATAT--A--G--ATTGGATTT----CT--T-------------T---T
i Mus_spretus.CM004101.1                                 C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_12866             80780 63 -     86153 CAGGA------GGAA------AT-CC----------------------TGGT------GT-TTAA---------------CAAAAGAGT---ACC---C-----------AAG-------C-T-A------------CAAAT--G--T--ACAACATTT----AT--T-------------T---T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 1
s Mustela_putorius.JH418006.1                             14353429 29 +  14710649 --------------------------------------------------------------------------------------------------------------ATC-------Act-c------------caaat--a--t--gtaaaattt----tc--t-------------t--tt
i Mustela_putorius.JH418006.1                            I 31 C 0
s Myotis_brandtii.KE162005.1                               9790983 64 +  10118263 CAGTG------GGAG------AC-TC----------------------CAGT------GT-TTGG---------------CAAAAGACT---AGT---T-----------ATC-------CCT-T------------CAATT--G--T--ATAACACTT----CT--T-------------T---T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385345 64 +   6019432 CAGTG------GGAG------AC-TC----------------------CAGT------GT-TTGG---------------CAAAAGACT---AGT---T-----------ATC-------CCT-T------------CAATT--G--T--ATAACACTT----CC--T-------------T---T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381165 64 +   4330536 CAGTG------GGAG------AC-TC----------------------CAGT------GT-TTGG---------------CAAAAGACT---AGT---T-----------ATC-------CCT-T------------CAATT--G--T--ATAGCACTT----CC--T-------------T---T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_423922                         715 64 +       920 CAGTG------GGAG------AC-TC----------------------CAGT------GT-TTGG---------------CAAAAGACT---AGT---T-----------ATC-------CCT-T------------CAATT--G--T--ATAACACTT----CC--T-------------T---T
i Myotis_myotis.MyoMyo_scaffold_423922                   I 98 n 64
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117828 40 +    130748 CAATA------AGAA------ATATG----------------------TATC------AT-TTGG---------------CAAAAGACT---GGCTACT---------------------------------------------------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 30
s Nasalis_larvatus.k141_1350636                              26869 62 +     34575 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467372 44 -  31847680 ---------------------------------------------------------------GG---------------CAAAAGACT---ACC---C-----------ATC-------CCT-C------------CATAT--a--t--gtaacattt----cc--t-------------t--tt
i Neomonachus_schauinslandi.NINY01007730.1               I 21 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125872 64 -    149072 CAGTG------GGGG------AT-TC----------------------CGGT------GT-TTGG---------------CAAAGGACC---AAT---C-----------ATC-------CCT-T------------CAAAT--G--T--ATAACATTT----CC--T-------------T---T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51595 76 -    132029 CAGTA------GGAG------TC-CC----------------------CAGT------GT-CTGGAGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--G--T--ATAACATTT----AT--T-------------T---T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7690 76 -     16345 CAGTA------GGAG------TC-CC----------------------CAGT------GT-CTGGAGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--G--T--ATAACATTT----AT--T-------------T---T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13575 76 +     22201 CAGTA------GGAG------TC-CC----------------------CAGT------GT-CTGGAGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--G--T--ATAACATTT----AT--T-------------T---T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411859 76 -  22158432 CAGTA------GGAG------TC-CC----------------------CAGT------GT-CTGGAGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--G--T--ATAACATTT----AT--T-------------T---T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  23973 76 -     54323 CAGTA------GGAG------TC-CC----------------------CAGT------GT-CTGGAGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--G--T--ATAACATTT----AT--T-------------T---T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196523 44 +   9404916 ---------------------------------------------------------------GG---------------CAAAAGACT---ACC---T-----------ATC-------TCT-C------------CAAAT--G--T--Gtaaccttt----cc--t-------------t--tt
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 21 C 0
s Nycticebus_bengalensis.LG01                             93634622 62 + 196305487 CAGTA------GGAG------AC-CC----------------------CAAT------GT-TTGG---------------CCAAAGCGA---AGC---C-----------AAA-------C-T-G------------C-AAT--G--T--ATAATATTC----CT--T-------------T---T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1380 62 -      3937 CAGTA------GGAG------AC-CC----------------------CAAT------GT-TTGG---------------CCAAAGCGA---AGC---C-----------AAA-------C-T-G------------C-AAT--G--T--ATAATATTC----CT--T-------------T---T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562861 62 - 199412804 CAGTA------GGAG------AC-CC----------------------CAAT------GT-TTGG---------------CCAAAGCGA---AGC---C-----------AAA-------C-T-G------------C-AAT--G--T--ATAATATTC----CT--T-------------T---T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549510 34 -   3988456 --------------------------------------------------------------------------------------TGT---AGT---C-----------TGT-------T-T-C------------TACAt--g--t--attacattt----ct--t-------------t---t
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Octodon_degus.JH651603.1                                11045771 39 -  11899542 ---------------------------------------------------T------GT-ATGG---------------CAAAAGAAC---AGT---C-----------AAA-------C-T-C------------CTAAT--G--T--GTATTA------------------------------
i Octodon_degus.JH651603.1                               I 16 C 0
s Odobenus_rosmarus.KB229312.1                             1449968 44 +   2017862 ---------------------------------------------------------------GG---------------CAAAAGATG---ACC---C-----------ATC-------CCT-C------------CATAT--A--T--gtaacattt----cc--t-------------t--tt
i Odobenus_rosmarus.KB229312.1                           I 21 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91036 29 -    140218 CATAA------GGAG------AC-TA----------------------CAGT------AT-TAGA---------------TGAAA--G--------------------------------------------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 9
s Onychomys_torridus.OnyTor_scaffold_2487                   105473 61 +    107918 CATGA------GGAG------AC-TA----------------------TAGT------GT-TTGA---------------TGAAGGAGG---AGA---C-----------AAG-------C-T-C------------CATAT--G--C--AAAGCATTT----CT--T------------------
i Onychomys_torridus.OnyTor_scaffold_2487                C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_171931              11618 64 -     14239 CAGTA------TAAC------AT-TC----------------------CAAT------GT-TTGA---------------CAAAGGACT---AAT---C-----------ATC-------TTT-C------------TAAAT--G--T--GTAACACTT----CA--T-------------G---T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107101976 34 - 174332312 --------------------------------------------------------------------------------------TGT---AGT---C-----------TGC-------C-T-C------------CACAT--A--A--ATCACaatt----cc--t-------------t---t
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37560 44 +    559221 ---------------------------------------------------------------GG---------------CAAAAGACT---ACC---T-----------ATC-------TCT-C------------CAAAT--G--T--Gtaaccttt----cc--t-------------t--tt
i Otocyon_megalotis.JAEUCK010005147.1                    I 21 C 0
s Otolemur_crassicaudatus.k141_649260                        38004 62 -     51505 CAGTA------GGAG------AC-CC----------------------CAAT------GT-TTGG---------------CCAAAGAGA---AGC---C-----------AAA-------C-T-G------------C-AAT--G--T--ATAACGTTC----CT--T-------------T---T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351007 62 +   1103335 CAGTA------GGAG------AC-CC----------------------CAAT------GT-TTGC---------------CCAAAGAGA---AGC---C-----------AAA-------C-T-G------------C-AAT--G--T--ATAACgttc----ct--t-------------t---t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470688 76 - 189151597 CAGTA------GGAG------TC-CC----------------------CAGT------GT-TTGGGGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--g--t--ataatattt----ct--t-------------t---t
i Pan_troglodytes.CM009242.2                             I 24 I 15
s Panthera_onca.PanOnc_flattened_line_3271                   22725 23 -    230217 ---------------------------------------------------------------GG---------------CAAAAGACT---ATC---C-----------ATC-------CCT-C------------C------------------------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               I 21 I 12
s Panthera_pardus.KV860321.1                              18460051 23 -  18783137 ---------------------------------------------------------------GG---------------CAAAAGACT---ATC---C-----------ATC-------CCT-C------------C------------------------------------------------
i Panthera_pardus.KV860321.1                             I 21 I 12
s Panthera_tigris.KE722367.1                               3970771 23 +   8748460 ---------------------------------------------------------------GG---------------CAAAAGACT---ATC---C-----------ATC-------CCt-c------------c------------------------------------------------
i Panthera_tigris.KE722367.1                             I 21 I 12
s Papio_anubis.CM001495.2                                   241101 63 - 183742232 CAATA------GGAG------TC-CC----------------------CAGC------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7565 63 +     21308 CAATA------GGAG------TC-CC----------------------CAGC------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288604 63 -  20919399 CAATA------GGAG------TC-CC----------------------CAGC------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20220 63 -     27687 CAATA------GGAG------TC-CC----------------------CAGC------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13356 63 +     16796 CAATA------GGAG------TC-CC----------------------CAGC------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20166 63 -     23640 CAATA------GGAG------TC-CC----------------------CAGC------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13365 23 +     78924 ---------------------------------------------------------------GG---------------CAAAAGACT---ATC---C-----------ATC-------CCA-C------------C------------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 21 I 10
s Perodicticus_ibeanus.k141_1921260                          24288 62 +     31479 CAGTA------AGAG------AC-CC----------------------CAAT------GT-TTGG---------------CCAAAGTGA---AGC---C-----------AAA-------C-T-G------------C-AAT--G--T--ATAACATTC----CT--T-------------T---T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16647 62 -     24908 CAGTA------AGAG------AC-CC----------------------CAAT------GT-TTGG---------------CCAAAGTGA---AGC---C-----------AAA-------C-T-G------------C-AAT--G--T--ATAACATTC----CT--T-------------T---T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37822 76 +     38305 TTGGA------GGAG------AT-CC----------------------TAAT------GC-TTGG---------------TTAAAGCAT---AGA---C-----------TAA-------T-T-T------------TACAT--G--T--AACACACAA----CA--TAGAATACACTGCCT---T
i Perognathus_longimembris.PerPac_flattened_line_28053   I 59 I 1
s Peromyscus_maniculatus.KI615324.1                         245103 61 +  18517816 CATGA------GGAG------AC-TA----------------------CAGT------GT-TTGA---------------TGAAGGAGG---AGA---C-----------AAG-------C-T-C------------CATAT--G--C--ATAGCATTT----CT--T------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 2
s Petromus_typicus.PetTyp_scaffold_17301                     30223 40 -     56120 ----------------------------------------------------------------G---------------TCAATGTGT---GGC---A-----------AAA-------C-T-C------------CAAAT--G--T--GTAATTTTT----CT--T-------------T----
i Petromus_typicus.PetTyp_scaffold_17301                 I 11 I 2
s Piliocolobus_badius.k141_2704958                             384 62 +     55023 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T----
i Piliocolobus_badius.k141_2704958                       C 0 I 1
s Piliocolobus_kirkii.k141_1310104                             385 62 +     40849 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T----
i Piliocolobus_kirkii.k141_1310104                       C 0 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                  252133 62 +  14605196 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T----
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1108 64 +     22231 CAGTG------GGAG------AC-TC----------------------CAGT------GT-TTGG---------------CAAAAGACT---AGT---T-----------ATC-------CCT-T------------CAATT--G--T--ATAACATTT----CC--T-------------T---T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63135 61 +    207309 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TCGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--C-------------T---T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4229 61 -     25401 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TCGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCACTT----CT--T-------------T---T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               29970 61 +     58159 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TCGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--C-------------T---T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30246 61 +     63561 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TCGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--C-------------T---T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30009 61 +     51148 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TCGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--C-------------T---T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              554976 61 -   4542175 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TCGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCACTT----CT--T-------------T---T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           29993 61 +     51125 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TCGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--C-------------T---T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6400 61 +     39866 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AGG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1485 61 -      9282 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------GGG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40889 61 -     87950 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AGG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41282 61 -     88961 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AGG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          5981 61 -     39403 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AGG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40933 61 +     87928 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AGG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          5978 61 -     60166 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AGG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12914 61 -     67232 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AGG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40830 61 -     90634 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AGG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42298 61 +     89403 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AGG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175828 76 - 189387572 CAGTA------GGAG------TC-CC----------------------CAGT------GT-TTGGGGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--g--t--ataatattt----ct--t-------------t---t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190646 76 -   9816681 CAGTA------GGAG------TC-CC----------------------CAGT------GT-TTGGGGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--G--T--ATAATATTT----CT--T-------------T---T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25483 62 +     69807 CAGTA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----GT--T-------------T----
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42678 62 -     80239 CAGTA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----GT--T-------------T----
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980871 63 +   4620579 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ataaacttt----ct--t-------------t---c
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564339 62 -   2598838 TAGTA------GGAG------AT-CC----------------------CAAT------GT-TT-G---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CCAAT--g--t--ataacattt----ct--t-------------t---t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           1975 62 -      7103 CAGTA------GGAG------AT-CC----------------------CAAT------GT-TT-G---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CCAAT--G--T--ATAACATTT----CT--T-------------T---T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2572 62 -     11706 CAGTA------GGAG------AT-CC----------------------CAAT------GT-TT-G---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--GTAACATTT----CT--T-------------T---T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6308 62 -     30655 CAGTA------GGAG------AT-CC----------------------CAAT------GT-TT-G---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAACATTT----CT--T-------------T---T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32633 62 +     46564 CAGTA------GGAG------AT-CC----------------------CAAT------GT-TT-G---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--GTAACATTT----CT--T-------------T---T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92904 62 -     98465 TCGTA------GGAG------AT-CC----------------------CAAT------GT-TT-G---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAACATTT----CT--T-------------T---T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6541 62 +     35169 CAGTA------GGAG------AT-CC----------------------CAAT------GT-TT-G---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAACATTT----CT--T-------------T---T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34429 63 +     52041 CATGA------GGAG------AC-AA----------------------TAAT------AT-TTGA---------------TGAAAGAGG---AGA---C-----------AAG-------C-T-C------------CATat--a--c--atagcattt----tt--t-------------t---t
i Psammomys_obesus.NESX01036366.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_48144          2994 29 -     18639 --------------------------------------------------------------------------------------------------------------ATC-------ACT-C------------CAAAT--A--T--GTAAAATTT----TC--T-------------TT--T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 31 C 0
s Pteronotus_parnellii.KE847780.1                            50132 22 -     66298 -------------------------------------------------GGA------GT-CTGG---------------GAACAGAGT---TGT---T---------------------------------------------------------------------------------------
i Pteronotus_parnellii.KE847780.1                        C 0 I 13
s Pteropus_alecto.KB030862.1                               5839120 64 -  28871421 CAATG------GGAG------AC-CC----------------------CAGT------GT-TTGA---------------CAAAAGGTT---AGC---C-----------ATC-------CCT-C------------TAAAT--G--T--gtaacattt----cc--t-------------t---t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535686 64 -   4952924 CAATG------GGAG------AC-TC----------------------CAGT------GT-TTGA---------------CAAAAGGTT---AGC---C-----------ATC-------CCT-C------------TAAAT--G--T--gtaacattt----cc--t-------------t---t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097368 23 +  38429054 ---------------------------------------------------------------GG---------------CAAAAGACT---ATC---C-----------ATC-------cct-c------------c------------------------------------------------
i Puma_concolor.QAVW01001104.1                           I 21 I 11
s Pygathrix_cinerea.k141_1153803                             24893 62 +     91421 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T----
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151386 62 -   7812017 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T----
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5763 62 +     72585 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T----
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020874 63 -  90668790 AACGT------GGAG------AC-TA----------------------CAGT------AT-TTGa---------------tggaagagg---aga---c-----------agg-------c-t-C------------TATAC--G--T--ATAGCCTTT----CT--T-------------T---C
i Rattus_norvegicus.chr16                                C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                       2913082 64 +   3329780 cattG------GGAG------AC-TC----------------------CAAA------GT-CTGA---------------CATAATATT---AGC---C-----------ATC-------CCT-C------------CATAT--T--T--GTAACATTT----CC--T-------------T---T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26703 62 +     27361 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----GT--T-------------T----
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120070 62 + 195417433 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----GT--T-------------T----
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234311 62 -   7961872 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----GT--T-------------T----
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73102 64 -    116970 CAATG------GGAG------AC-TC----------------------TAGT------TT-TTGA---------------CAAAAGGTT---AGC---C-----------ATC-------CCT-C------------TAAAT--G--T--ATACCATTT----CC--T-------------T---T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2058 57 +     27962 CAGGT------GGAG------TC-CC----------------------CACT------GT-TCGG---------------CAG--CAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T-----CCACGT----C---T-------------G---T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2066 56 +      6077 CAGTC------GGAG------TC-CC----------------------CACT------GT-TTGG---------------CAG--CAGT---AGC---C-----------AAG-------C-T-C-------------GAAT--G--T-----CCATGT----C---T-------------G---T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2103 57 +      5971 CAGTC------GGAG------TC-CC----------------------CACT------GT-TTGG---------------CAG--CAGT---AGC---C-----------AAG-------C-T-C------------TGAGT--G--T-----CCATCT----C---T-------------G---T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2157 57 +      5932 CAGTC------GGAG------TC-CC----------------------CACT------GT-TTGG---------------CAG--CAGT---AGC---C-----------AGG-------C-T-C------------TGAGT--G--T-----CCATCT----C---T-------------G---T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               340 57 -      4390 CAGTC------GGAG------TC-CC----------------------CACT------GT-TCGG---------------CAG--CAGT---AGC---C-----------AAG-------C-T-C------------TGAGT--G--T-----CCATTT----C---T-------------G---T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389406 57 - 209938924 CAGGT------GCAG------TC-CC----------------------CACT------GT-TCGG---------------CAG--CAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T-----CCATGT----C---T-------------G---T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2105 57 +      5979 CAGTC------GGAG------TC-CC----------------------CACT------GT-TCGG---------------CAG--CAGT---AGC---C-----------AAG-------C-T-C------------TGAGT--G--T-----CCATCT----C---T-------------G---T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2453 56 -      4301 CAGTC------GGAG------TC-CC----------------------CACT------GT-TTGG---------------CAG--CAGT---AGC---C-----------AAG-------C-T-C-------------GAAT--G--T-----CCATGT----C---T-------------G---T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236560 61 +   5703754 CAGTC------GGAG------TC-CC----------------------CTGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6150 61 +     21866 CAGTC------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAA--GAGT---AGC---C-----------AAG-------C-T-C------------TGAAT--G--T--ATTCCATTT----CT--T-------------T---T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114306 42 +    313613 -------------------------------------------------------------TCAG---------------CAAAACTCT---AGT---C-----------ATT-------TAT-C------------TTCAA--T--T--ATAAC--TT----CC--T-------------T----
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 11 C 0
s Semnopithecus_entellus.k141_158471                         23210 62 +     27374 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26729 62 +     58920 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13225 62 -     45317 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20883 62 -     42441 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23563 62 -     29113 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26632 62 -     48123 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    46967 61 +     77746 TATGA------GGAG------AC-TA----------------------TAGT------GT-TTGA---------------TGAAAGAGG---CAA---C-----------AAG-------C-T-C------------CATAT--A--T--ATAGTATTT----AT--T------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 2
s Solenodon_paradoxus.SolPar_flattened_line_126            1856625 46 -   1910179 -------------------------------------------------------------TTGG---------------CAAATGATT---AGG---CA----------ATT-------CCT-C------------CACAT--G--C--GCACCATTT----CC--T-------------T---T
i Solenodon_paradoxus.SolPar_flattened_line_126          I 11 C 0
s Spermophilus_dauricus.KZ294078.1                         1866612 35 +   3870691 -------------------------------------------------------------------------------------AAGT---ACC---C-----------AAA-------C-T-C------------CACAT--G--T--ATAACAATT----CT--T-------------T---T
i Spermophilus_dauricus.KZ294078.1                       I 20 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525              4791 44 -     97271 ---------------------------------------------------------------GG---------------CAAAAGACT---ATC---C-----------ATC-------CCT-C------------CAGAT--A--T--GTAACATTT----CC--T-------------TT--T
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 20 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123191 13 +    196729 CAGTA------GGAG------AT-GC----------------------------------------------------------------------------------------------------------------------------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 39
s Symphalangus_syndactylus.tarseq_199                       389132 76 +   1523678 CAGTA------GGAG------TC-CC----------------------CAGT------GT-CTGGAGGACTCCTACTCTTTTG--GAGT---AGC---C-----------AAA-------C-T-C------------TGAAT--G--C--ATAACATTT----CT--T-------------T---T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11928 64 +     22964 CACTG------GGAG------AC-TC----------------------CAGT------GT-TTGG---------------CAAAAGACT---AGT---T-----------ATC-------CCT-T------------CAAAT--G--T--ATAGCATTT----CC--T-------------T---T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                 948 40 +      5583 CACTA------AGAA------ATATG----------------------TATC------AT-TTGA---------------CAAAAGACT---GGCTACC---------------------------------------------------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 30
s Tapirus_indicus.TapInd_scaffold_7432                      189878 43 +    199430 ---------------------------------------------------------------GG---------------CAAAAGAC----AAC---A-----------GTC-------TCT-C------------CAAAT--G--T--GTGACATTT----CC--T-------------TT--T
i Tapirus_indicus.TapInd_scaffold_7432                   I 21 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103832 43 -    539355 ---------------------------------------------------------------GG---------------CAAAAGAC----AAC---A-----------GTC-------TCT-C------------CAAAT--G--T--GTGACATTT----CC--T-------------TT--T
i Tapirus_terrestris.TapTer_scaffold_755                 I 21 C 0
s Tarsius_lariang.k141_1780720                                5173 63 +      6850 CAGTA------GAAG------AT-CC----------------------CAAT------GT-TTGG---------------CAAAAAAGT---AGC---T-----------AAA-------C-T-T------------TGAAA--A--T--ATAACATTT----CT--C-------------T---T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5214 63 +     20590 CAGTA------GAAG------AT-CC----------------------CAAT------GT-TTGG---------------CAAAAAAGT---AGC---T-----------AAA-------C-T-T------------TGAAA--A--T--ATAACATTT----CT--C-------------T---T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351087 63 - 186847797 CAATA------GGAG------TC-CC----------------------CAGT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCATGT----AT--T-------------T---T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22555 34 -     33621 ----------------------------------------------------------------A---------------CAAATGTGT---GTC---G-----------AAA-------C-T-C------------CAAAT--G--T---------TT----CT--T-------------T---T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 11 I 1
s Tolypeutes_matacus.TolMat_scaffold_31955                   18112 38 -     31044 ------------------------------------------------------------------------------------------------------------------------CACCCCCACCCCCGCCCCCAAT--A--T--ACACCGTTT----TT--T-------------T---C
i Tolypeutes_matacus.TolMat_scaffold_31955               I 41 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    477974 58 -    610378 ------------GAG------AT-TC----------------------CAGT------GT-TTTG---------------GAGAAGACT---AGT---C-----------GTC-------CCT-T------------CAAGT--G--T--AGAACGTTT----CC--A-------------T---T
i Tonatia_saurophila.TonSau_scaffold_294                 I 5 C 0
s Trachypithecus_auratus.k141_1189070                        18774 62 +     26378 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31438 62 -     78344 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18095 62 +     25722 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26320 62 -     62838 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26437 62 +     46913 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7243 62 -     28527 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28259 62 -     64340 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26296 62 -     63452 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7739 62 +     22490 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1167 62 -      6147 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8141 62 -     13050 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253380 62 -   6242583 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59131 62 +     59866 CAATA------GGAG------TC-CT----------------------CAGT------GT-CTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------TGAGT--G--T--CTACCACGT----AT--T-------------T----
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832387 80 -   4065304 CAGTa------ggac------cc-ccccccacccccgccccaacTGCCCCAG------GT-TTGG---------------CCAAAGAGT---AAC---C-----------AAA-------c-t-c------------caaat--a--t-------attt----ct--t-------------t---t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6700 81 -     70247 CAGTA------GGAC------CC-CC-TCTCCCCACACCCCAACCACCCCAG------GT-TTGG---------------CCAAAGAGT---AGC---C-----------AAA-------T-T-C------------CAAATGTA--T-------ATTT----CT--T-------------T---T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     509 44 -     21056 -------------------------------------------------------------TCAG---------------CAGATCTTT---AGC---C-----------ATT-------TAT-C------------TTCAA--T--T--ATTACATTT----CC--T-------------T----
i Uropsilus_gracilis.UroGra_scaffold_46687               I 11 C 0
s Ursus_maritimus.KK499267.1                                180136 42 +   5085361 ---------------------------------------------------------------GG---------------CAAAAGACT---ACC---C-----------ATC-------CCT-C------------CAAAT--A--C--GTAACA--T----CC--G-------------TT--T
i Ursus_maritimus.KK499267.1                             I 21 C 0
s Varecia_rubra.k141_787544                                  23516 63 -     30710 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22423 63 -    147434 CAGTA------GAAG------AC-CC----------------------CAAT------GT-TTGG---------------CAAAAGAGT---AGC---C-----------AAA-------C-T-C------------CAAAT--G--T--ATAAACTTT----CT--T-------------T---C
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103282 44 -    112863 ---------------------------------------------------------------GG---------------CAAAAGACT---ACC---T-----------ATC-------TCT-C------------CAAAT--G--T--GTAACCTTT----CC--T-------------TT--T
i Vulpes_lagopus.VulLag_flattened_line_12041             I 21 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172366 64 -    224448 AAGAA------AGAG------AC-TC----------------------TAAT------CTCTTTT---------------TTAAAAAGT---ACC---C-----------AAA-------C-T-C------------CAGAT--G--T--ATAACAATT----CT--T-------------T---T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 2
s Zalophus_californianus.ZalCal_flattened_line_17732         27166 44 -     86975 ---------------------------------------------------------------GG---------------CAAAAGACG---ACC---C-----------ATC-------CCT-C------------CATAT--A--T--GTAACATTT----CC--T-------------TT--T
i Zalophus_californianus.ZalCal_flattened_line_17732     I 21 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1617 69 +      2695 TATTATGTATGTGAA------AC-CA----------------------CACT------AT-TTGG---------------TGAAAGGGT---AGC---C-----------AAG-------C-T-T------------GGTAT--G--T--GTAACATTT----CT--C-------------T---T
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 1
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786  8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3409 15 +     36723 C--C---CC-T--GCTT-CCA-----TC--A
s Acinonyx_jubatus.LLWD01001279.1                           811139 14 +   1699592 ---t---ct-t--gcct-tta-----tt--a
i Acinonyx_jubatus.LLWD01001279.1                        I 11 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18198 12 +     63021 ---C---CT-G---TTT-TA------TC--T
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413668 14 +  29979442 ---C---CC-T--GCCT-TTA-----TC--A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213776 14 +    347723 ---c---cc-t--gCCT-TTA-----TC--A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16312 13 -     61208 ---C---CT-T--CCCT-CA------TC--A
i Allactaga_bullata.AllBul_scaffold_20030                I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45804 15 +     53615 C--C---CC-T--GCTT-GCA-----TC--A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41744 14 +     44087 C--C---C--T--GCTT-GCA-----TC--A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14383 14 -     21945 ---C---CC-T--GCTT-GCA-----TC--A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16060 14 +     32033 C--C---C--T--GCTT-GCG-----TC--A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70506 15 -     84148 C--C---CC-T--GCTT-CCA-----TC--A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42739 15 -     78289 C--C---CC-T--GCTT-CCA-----TC--A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42185 15 +     55831 C--C---CC-T--GCTT-CCA-----TC--A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40626 15 -     64179 C--C---CC-T--GCTT-CCA-----TC--A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22273 15 -     24835 C--C---CC-T--GCTT-CCA-----TC--A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39256 15 +     45454 C--C---CC-T--GCTT-CCA-----TC--A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44954 15 +     70886 C--C---CC-T--GCTT-CCA-----TC--A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7079 15 +     30854 C--C---CC-T--GCTT-CCA-----TC--A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31218 15 +     42133 C--C---CC-T--GCTT-CCA-----TC--A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      174999 15 -    412891 T--C---CC-T--GCCT-GCA-----TC--A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49028 15 -     65372 C--C---CC-T--GCTT-ACA-----TC--A
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42775 15 +     43593 C--C---CC-T--GCTT-CCA-----TC--A
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670788 15 +   5030052 c--c---cC-T--GCTT-CCA-----TC--A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22430 15 -     23494 C--C---CC-T--GCTT-CCA-----TC--A
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7566 15 +      8415 C--C---CC-T--GCTT-CCA-----TC--A
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14342  7 -     32367 -------CC-T--GACT--------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 2 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3286 15 -     15198 C--C---CC-T--GCCT-CCA-----TC--A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273018 15 +  21539123 C--C---CC-T--GCTT-CCA-----TC--A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9185 15 +     48076 C--C---CC-T--GCTT-CCA-----TC--A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4322 15 -     28759 C--C---CC-T--GCTT-CCA-----TC--A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31875 15 +     44353 C--C---CC-T--GCTT-CCA-----TC--A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47246 15 -     71267 C--C---TC-T--GCTT-CCA-----TC--A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21305 15 -     33135 C--C---CC-T--GCTT-CCA-----TC--A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4517 15 +     11645 T--C---TC-T--GCCT-CCA-----TC--A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4523 15 -     19611 T--C---TC-T--GCCT-CCA-----TC--A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6209 15 +     28062 C--C---CC-G--GCTT-CCA-----TC--A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41503 15 -     91139 C--C---CC-G--GCTT-CCA-----TC--A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19029 15 +     95584 C--C---CC-G--GCTT-CCA-----TC--A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18942 15 +    119600 C--C---CC-G--GCTT-CCA-----TC--A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8416 15 +     18648 C--C---CC-T--GCTT-CTG-----TC--A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8077 15 -     13885 C--C---CC-T--GCTT-CCG-----TC--G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16777 15 +     17162 C--C---CC-T--GCTT-CCA-----TC--A
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451732 15 + 189096842 C--C---CC-T--GCTT-CCA-----TC--A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              18025 15 -     18408 C--C---CC-T--GCTT-CCA-----TC--A
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503696 14 +  60362399 ---C---TC-T--GCTT-TTA-----TC--A
i CanFam4.chr16                                          C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7332 14 -     23171 ---C---TC-T--GCTT-TTA-----TC--A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 3
s Canis_lupus_dingo.QKWQ01000480.1                          220675 14 +   9314153 ---c---tc-t--gctt-tta-----tc--A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 3
s Canis_lupus_familiaris.chr16                            41613810 14 +  59632846 ---c---tc-t--gctt-tta-----tc--A
i Canis_lupus_familiaris.chr16                           C 0 I 3
s Canis_lupus_orion.HG994398.1                            45105391 14 -  63665305 ---c---tc-t--gctt-tta-----tc--A
i Canis_lupus_orion.HG994398.1                           C 0 I 3
s Carlito_syrichta.NW_007259797.1                           268544 15 +    496798 T--T---CC-T--GCCT-CCA-----TA--A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3578 15 +      5315 C--C---GC-T--GCCT-CCA-----TC--A
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994277 13 +  23392119 t--c---tc-t--gttt--c------tc--a
i Cavia_aperea.AVPZ01000300.1                            I 1 C 0
s Cavia_porcellus.DS562891.1                               4997719 13 +  23407841 t--c---tc-t--gttt--c------tc--a
i Cavia_porcellus.DS562891.1                             I 1 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60820 13 -     66877 T--C---TC-T--GTTT--C------TC--A
i Cavia_tschudii.CavTsc_scaffold_23560                   I 1 C 0
s Cebuella_niveiventris.k141_592277                           3309 15 -     12580 C--C---CC-T--GCTT-CCG-----TC--A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41194 15 +     53515 C--C---CC-T--GCTT-CCG-----TC--A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369402 14 -  26074798 C--C---CC-T--GCTT-CC------TC--A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6291 14 -     34880 C--C---CC-T--GCTT-CC------TC--A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65386 14 -     89041 C--C---CC-T--GCTT-CC------TC--A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          521 15 -      5494 T--T---CC-T--GCCT-CCA-----TA--A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490471 14 -  27778364 ---C---CC-T--GCCT-CCG-----TC--A
i Ceratotherium_simum.JH767749.1                         C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17304 14 +     27315 ---C---CC-T--GCCT-CCG-----TC--A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 4
s Cercocebus_atys.KQ010504.1                                138983 15 -   4669795 C--C---CC-T--GCTT-GCA-----TC--A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42723 15 +     47900 C--C---CC-T--GCTT-GCA-----TC--A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42556 15 -     44860 C--C---CC-T--GCTT-GCA-----TC--A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42539 15 -    148725 C--C---CC-T--GCTT-GCA-----TC--A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9796 15 -     17524 C--C---CC-T--GCTT-GCA-----TC--A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25518 15 -     34525 C--C---CC-T--GCTT-GCA-----TC--A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        29995 15 -     45857 C--C---CC-T--GCTT-GCA-----TC--A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23487 15 +     70610 C--C---CC-T--GCTT-GCA-----TC--A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20412 15 +     36323 C--C---CC-T--GCTT-GCA-----TC--A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11127 15 -     19938 T--G---CT-T--GGCC-CCG-----TT--G
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28952 15 -     33796 T--C---TC-T--GCCT-CCA-----TC--A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3468 15 -     15404 T--C---TC-T--GCCT-CCA-----TC--A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7292 15 -     32913 C--C---CC-C--GCTT-CCA-----TC--A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17705 15 -     40346 C--C---CC-G--GCTT-CCA-----TC--A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17960 15 +    216457 C--C---CC-A--GCTT-CCA-----TC--A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17753 15 +     39636 C--C---CC-G--GCTT-CCA-----TC--A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2117 15 +      5346 C--C---CC-T--GCTT-CCG-----TC--A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40849 15 -    112038 G--C---CC-A--GCTT-CCA-----TC--A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6421 15 +     34062 C--C---CC-A--GCTT-CCA-----TC--A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341309 15 +  18827391 C--C---CC-T--GCTT-GCA-----TC--A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7854 15 -     44032 C--C---CC-T--GCTT-GCA-----TC--A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302634 15 - 135778131 C--C---CC-T--GCTT-GCA-----TC--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407068 14 -   2368649 ---C---CC-T--GCTT-GCA-----TC--A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376946 14 - 200372422 ---C---CC-T--GCTT-GCA-----TC--A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                493 14 -     84244 ---C---CC-T--GCTT-GCA-----TC--A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805557 15 +  53390261 t--c---ct-t--ccct-tga-----TC--A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1061 15 -      8242 T--C---CC-T--GCCT-ATA-----CC--A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40579 13 -     83289 ---C---TC-A--GGTT-CC------TC--T
i Cricetomys_gambianus.CriGam_scaffold_14425             I 1 C 0
s Cricetulus_griseus.LT883664.1                          213113042 12 - 224834208 ---C---CC-A---TTT-CA------TC--T
i Cricetulus_griseus.LT883664.1                          I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2599 14 +     87169 ---T---CC-T--GCCT-TTA-----TT--A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 10 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643079 14 -   1526836 T--T---CC-T--GTCT-CC------TT--A
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3302 14 +     50838 -------TC-TTTGTCT-CC------TC--G
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   1899 14 +     36344 T--C---TC-T--GTCT-CT------TC--A
i Cuniculus_paca.CunPac_flattened_line_7025              I 1 I 268
s Dasypus_novemcinctus.JH564415.1                          2108469 10 -   2246927 -------------GGCC-CCC-----TC--A
i Dasypus_novemcinctus.JH564415.1                        I 4 C 0
s Daubentonia_madagascariensis.ctg71                        290888 15 +  12879189 T--C---TC-T--GCCT-CCA-----GC--A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863023 20 -  20541912 t--c---cc-t--gcct-ccctcccctc--c
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662763 14 -   1390856 ---C---CC-T--GCCT-CCA-----TC--A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 4
s Diceros_bicornis.DicBicMic_scaffold_5955                  137548 14 -    198055 ---C---CC-T--GCCT-CCA-----TC--A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 4
s Dinomys_branickii.DinBra_scaffold_10381                    96777 14 -    115145 T--C---TC-T--ATCT-CC------TC--A
i Dinomys_branickii.DinBra_scaffold_10381                I 1 C 0
s Dipodomys_ordii.KN672350.1                              18948655 14 -  37912305 T--T---CC-T--GCTT-CA------TC--A
i Dipodomys_ordii.KN672350.1                             I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3602 14 -     10735 T--T---CC-T--GCTT-CA------TC--A
i Dipodomys_stephensi.DipSte_scaffold_89095              I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8220 13 +     14636 T--C---TC-T--GTTT--C------TC--A
i Dolichotis_patagonum.DolPat_scaffold_80628             I 1 C 0
s Echinops_telfairi.JH980293.1                            62852221 13 - 111700974 -------CT-T--GACA-CTC-----TA--A
i Echinops_telfairi.JH980293.1                           I 1 C 0
s Eidolon_helvum.AWHC01266696.1                               4591 15 +     19438 t--c---tc-t--gcct-cca-----tc--a
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         7814841 15 -  10337057 t--c---ct-g--gact-CTA-----GA--A
i Elephantulus_edwardii.JH947257.1                       N 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29322 13 +    110024 ---c--tgt-g---ttt-ca------tC--T
i Ellobius_lutescens.LOEQ01008920.1                      I 9 C 0
s Ellobius_talpinus.LOJH01026522.1                           11290 13 +     18970 ---C--TGT-G---TTT-CA------TC--T
i Ellobius_talpinus.LOJH01026522.1                       I 17 C 0
s Enhydra_lutris.KZ291758.1                               24914432 14 +  41312741 ---c---cc-t--gCTT-TTG-----TC--A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576658 15 +  14770903 C--C---CC-T--GCCT-CCA-----CC--A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039751 14 -   4378816 ---c---tg-t--gcct-cTA-----TC--A
i Equus_asinus.JREZ01000139.1                            C 0 I 4
s Equus_caballus.CM000403.2                               21373685 14 +  39960074 ---c---tg-t--gcct-cTA-----TC--A
i Equus_caballus.CM000403.2                              C 0 I 4
s Equus_przewalskii.KK951119.1                              410471 14 -    498745 ---c---tg-t--gcct-CTA-----TC--A
i Equus_przewalskii.KK951119.1                           C 0 I 4
s Erythrocebus_patas.Contig38                               260832 15 +  21539334 C--C---CC-T--GCTT-GCA-----TC--A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13060 15 -     24895 T--C---TC-T--GCCT-CCA-----TC--A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40772 12 -     70999 T--C---TC-T--GCCT-C--------C--A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84731 15 +    112731 T--C---TC-T--GCCT-CCA-----TC--A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41304 15 +     68309 T--G---TC-T--GCTT-CCA-----TC--A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51629 12 -     65740 T--C---TC-T--GCCT-C--------C--A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22259 15 -     75513 T--A---TC-T--GCCT-CCA-----TC--A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46452 15 -     97555 T--C---TC-T--GCCT-CCA-----TC--A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3179 15 +     30972 T--C---TC-T--GCCT-CCA-----TC--A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40902 12 -     52037 T--C---TC-T--GCCT-C--------C--A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57303 15 -    111500 T--C---TC-T--GCCT-CCA-----TC--A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245051 14 - 206538554 ---t---ct-t--gcct-tta-----tt--a
i Felis_catus.CM001381.2                                 I 13 C 0
s Felis_catus_fca126.CM031415.1                          185114837 14 - 205367284 ---t---ct-t--gcct-tta-----tt--a
i Felis_catus_fca126.CM031415.1                          I 13 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25939 14 -     30238 ---T---CT-T--GCCT-TTA-----TT--A
i Felis_nigripes.FelNig_flattened_line_31944             I 11 C 0
s Galago_moholi.ctg3793                                     122913 15 -    137831 T--C---TC-T--GCCT-CCA-----GC--A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6458 15 +     22493 T--C---TC-T--GCCT-CCA-----GC--A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18510 15 -     32986 T--C---TC-T--GCCT-CCA-----GC--A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17373 15 +     18121 T--C---CC-T--GCCT-CCA-----TC--A
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32242  9 -     36801 T--A---TT-C--ATCT--------------
i Glis_glis.GliGli_scaffold_33859                        I 1 C 0
s Gorilla_beringei.k141_3358147                               3748 15 -      8343 C--C---CC-T--GCTT-CCA-----TC--A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252759 15 - 186649187 C--C---CC-T--GCTT-CCA-----TC--A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11557  9 +     11903 C--A---CT-C--ATCT--------------
i Graphiurus_murinus.GraMur_scaffold_90206               I 11 C 0
s Hapalemur_alaotrensis.k141_330369                          12987 15 -     40692 C--C---TC-T--GCTT-CCA-----TC--A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34388 15 +     49394 T--C---TC-T--GCCT-CCA-----TC--A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59257 15 -     66874 T--C---TC-T--GCCT-CCA-----TC--A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8130 15 -     42923 T--C---TC-T--GCCT-CCA-----TC--A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15130 15 -     53142 T--C---TC-T--GCCT-CCA-----TC--A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29083 13 -    327341 ---T---CC-T--GCCT-TTA-----TT---
i Helogale_parvula.HelPar_flattened_line_2585            I 39 I 7
s Heterocephalus_glaber.JH602082.1                         1925361 14 -  22651954 t--c---tt-t--gtct-cc------tc--a
i Heterocephalus_glaber.JH602082.1                       I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49135 15 +     49977 T--T---TC-T--GCCT-CCA-----TC--A
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140747 15 -    630532 C--C---CC-T--GCTT-CCA-----TC--A
i Hoolock_leuconedys.ctg274                                 C 0 I 1
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67758 14 +     83186 ---T---CC-T--GCCT-TTA-----TT--A
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 10 I 7
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69654 13 +    143317 T--C---TC-T--GTTT--C------CT--A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 1 C 0
s Hylobates_agilis.k141_1155965                               3782 15 +     12352 C--C---CC-T--GCTT-CCA-----TC--A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10965 15 +     55766 C--C---CC-T--GCTT-CCA-----TC--A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050561 15 + 191637585 C--C---CC-T--GCTT-CCA-----TC--A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799439 15 +  11177569 C--C---CC-T--GCTT-CCA-----TC--A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385081 12 +   7955117 -------CC-T--GACT-CC------TC--T
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Indri_indri.k141_2415743                                     640 15 +     11955 T--C---TC-T--GCCT-CCA-----TC--A
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237499 13 +   9596543 ---c---ct-t--ccct-ca------tc--A
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Lagothrix_lagothricha.k141_246028                          41560 15 +    110728 C--C---CC-T--GCTT-CCG-----TC--A
i Lagothrix_lagothricha.k141_246028                      I 14 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60133 15 -     65777 C--C---CC-T--GCCT-CCA-----CC--A
i Lasiurus_borealis.LasBor_scaffold_16567                I 73 C 0
s Lemur_catta.scaffold_24                                 14757778 15 +  30322482 T--C---TC-T--GCCT-CCA-----TC--A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2225 15 -     13097 C--C---CC-T--GCTT-CCG-----TC--A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2176 15 +      5940 C--C---CC-T--GCTT-CCG-----TC--A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1810 15 -      5717 C--C---CC-T--GCTT-CCG-----TC--A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8426 15 -     11567 C--C---CC-T--GCTT-CCG-----TC--A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9807 15 -     12945 C--C---CC-T--GCTT-CCG-----TC--A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7306 18 +     29618 T--CCCCTC-T--GCCT-CCA-----TA--A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7303 18 +     31569 T--CCCCTC-T--GCCT-CCA-----TA--A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7314 18 +     24756 T--TCCCTC-T--GCCT-CCA-----TA--A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7312 18 +     16388 T--CCCCTC-T--GCCT-CCA-----TA--A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811813 14 -   3914936 ---c---cc-t--gCCT-TTA-----TC--A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16157 16 +     24238 TTCT----C-T--GCCT-TTG-----TC--A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330936 15 -   1826925 C--C---CC-T--GCTT-GCA-----TC--A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8672 15 +     19643 T--C---TC-T--GCCT-CCA-----GC--A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042333 15 -   6120653 T--C---TC-T--GCCT-CCA-----GC--A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078576 15 +  43346337 T-CC----T-G--GGCT-CTC-----TG--C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41612965 14 +  59628241 ---c---tc-t--gctt-tta-----tc--a
i Lycaon_pictus.CM007581.1                               C 0 I 3
s Macaca_arctoides.k141_1757516                              43253 15 -     61512 C--C---CC-T--GCTT-GCA-----TC--A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370914 15 -  60120075 C--C---CC-T--GCTT-GCA-----TC--A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23169 15 +     30207 C--C---CC-T--GCTT-GCA-----TC--A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20272 15 -     24934 C--C---CC-T--GCTT-GCA-----TC--A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23121 15 +     30527 C--C---CC-T--GCTT-GCA-----TC--A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34310 15 -     50087 C--C---CC-T--GCTT-GCA-----TC--A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44081 15 +     51645 C--C---CC-T--GCTT-GCA-----TC--A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413250 15 - 187317192 C--C---CC-T--GCTT-GCA-----TC--A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397473 15 +  25927173 C--C---CC-T--GCTT-GCA-----TC--A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46637 15 -     62418 C--C---CC-T--GCTT-GCA-----TC--A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23292 15 +     24253 C--C---CC-T--GCTT-GCA-----TC--A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43112 15 +     59329 C--C---CC-T--GCTT-GCA-----TC--A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269040 15 +    668171 C--C---CC-T--GCTT-GCA-----TC--A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20227 15 +     21031 C--C---CC-T--GCTT-GCA-----TC--A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  824 15 +     17132 C--C---CC-T--GCTT-GCA-----TC--A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221555 15 -    270270 T--C---TC-T--GCCT-CCA-----TC--A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320324 15 +  24302211 C--C---CC-T--GCTT-GCA-----TC--A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355156 15 -    752769 C--C---CC-T--GCTT-GCA-----TC--A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671852 13 -    737560 ---c---tt-t--gcct-atA-----TC---
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                             219140 13 +    317179 ---c---tt-t--gcct-cta-----tT---
i Manis_pentadactyla.KN006162.1                          C 0 I 1
s Marmota_marmota.CZRN01000018.1                           7499291 12 +  40650429 -------CC-T--GACT-CC------TC--T
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148756 15 +    207569 T--C---CC-C--GGCT-CCA-----TC--A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24306 14 -     74585 ---C---CC-T--GCCT-TTA-----TC--A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46949 11 -    140813 ---C---CT-G---TTT-T-------TC--T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 C 0
s Mesocricetus_auratus.KB708134.1                         17427595 12 +  29670104 ---C---CC-T---TTT-GA------TC--T
i Mesocricetus_auratus.KB708134.1                        I 2 C 0
s Mico_argentatus.k141_582562                                 8188 15 +     17804 C--C---CC-T--GCTT-CTG-----TC--A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8972 15 -     12984 C--C---CC-T--GCTT-CTG-----TC--A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16923 15 -     26561 C--C---CC-T--GCTT-CTA-----TC--A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982919 15 +  93316391 t--c---tc-t--gcct-ctA-----TC--A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43315 13 +    145209 -------CT-T--GACA-CTA-----TC--T
i Microgale_talazaci.MicTal_scaffold_6613                I 18 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182972 15 +    200668 T--C---CC-T--GCCT-CCA-----TC--A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960717 13 +  27267610 ---c--tgt-g---ttt-ca------tC--T
i Microtus_ochrogaster.CM001695.1                        I 9 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361087 15 -   8254450 t--c---ct-c--gCCT-CCA-----TC--A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             39988 15 -     48117 T--C---CT-T--GCCT-CCA-----TC--A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20351 15 -     27822 C--C---GC-T--GCTT-GCG-----TC--A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6824 14 +     27589 ---C---CC-T--GCCT-TTA-----TC--A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50710 15 -     62432 T--C---TC-T--GCCT-CCA-----TC--A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177126 15 +    366855 T--C---CC-T--GGCT-CCA-----TC--A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16836 13 -     63510 ---T---CC-T--GCCT-TTA-----TT---
i Mungos_mungo.MunMun_flattened_line_18455               I 20 I 7
s Murina_feae.MurFea_scaffold_17764                          37002 15 +     47283 C--C---CC-T--GCTT-CCA-----CC--A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   5024 12 +      5579 ---C---TT-A---CTT-TA------TC--T
i Mus_caroli.FMAL02030609.1                              I 1 C 0
s Mus_musculus.chr8                                       41685727 12 + 129401213 ---C---TT-A---CGT-TA------TC--T
i Mus_musculus.chr8                                      I 1 C 0
s Mus_spretus.CM004101.1                                  39495045 12 + 130317789 ---C---TT-A---CTT-TA------TC--T
i Mus_spretus.CM004101.1                                 I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80844  9 -     86153 T--A---CT-T--GTCT--------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 1 C 0
s Mustela_putorius.JH418006.1                             14353458 14 +  14710649 ---c---cc-t--gctt-tTG-----TC--A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791047 15 +  10118263 C--C---CC-T--GCCT-CCA-----CC--A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385409 15 +   6019432 C--C---CC-T--GCCT-CCA-----CC--A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381229 15 +   4330536 C--C---CC-T--GCCT-CCA-----CC--A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3788 15 +      3929 C--C---CC-T--GCCT-CCA-----CC--A
i Myotis_myotis.MyoMyo_scaffold_185951                   I 64 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117898 15 +    130748 T--C---CC-T--GCCC-ACA-----TC--A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 30 C 0
s Nasalis_larvatus.k141_1350636                              26931 14 +     34575 ---C---CC-T--GCTT-GCA-----TC--A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467416 14 -  31847680 ---c---tc-t--gcct-tta-----tc--A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125936 15 -    149072 T--C---CG-T--GCCT-CCA-----TC--T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51671 15 -    132029 C--C---CC-T--GCTT-CCA-----TC--A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7766 15 -     16345 C--C---CC-T--GCTT-CCA-----TC--A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13651 15 +     22201 C--C---CC-T--GCTT-CCA-----TC--A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411935 15 -  22158432 C--C---CC-T--GCTT-CCA-----TC--A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24049 15 -     54323 C--C---CC-T--GCTT-CCA-----TC--A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196567 14 +   9404916 ---c---tc-t--gctt-tta-----tc--a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 3
s Nycticebus_bengalensis.LG01                             93634684 15 + 196305487 T--C---TC-T--GTCT-CCA-----GC--A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1442 15 -      3937 T--C---TC-T--GTCT-CCA-----GC--A
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562923 15 - 199412804 T--C---TC-T--GCCT-CCA-----GC--A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549544 14 -   3988456 t--t----c-t--gcct-tct-----tc--A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045810 12 -  11899542 -------TC-T--ATCT-CC------TA--A
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450012 14 +   2017862 ---c---cc-t--gCCT-TTA-----TC--A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91074 13 -    140218 ---CC--GT-G---TTT-CA------TC--T
i Ondatra_zibethicus.OndZib_scaffold_7387                I 9 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105536 13 +    107918 -------AC-A---TTT-CA------TCATT
i Onychomys_torridus.OnyTor_scaffold_2487                I 2 I 10
s Orycteropus_afer.OryAfe_flattened_line_171931              11682 15 -     14239 T--T---CT-G--GGCT-CTA-----TA--A
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102010 16 - 174332312 ttct----c-t--gcct-tta-----tc--A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37604 14 +    559221 ---c---tc-t--gctt-tta-----tc--A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 3
s Otolemur_crassicaudatus.k141_649260                        38066 15 -     51505 T--C---TC-T--GCCT-CCA-----GC--A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351069 15 +   1103335 t--t---tc-t--gcct-cca-----gC--A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.NBAG03003182.1                              9945 16 -     24457 C--C---CC-T--GCTTCCCA-----TC--A
i Pan_troglodytes.NBAG03003182.1                         I 75 I 2632
s Panthera_onca.PanOnc_flattened_line_3271                   22760 14 -    230217 ---T---CT-T--GCCT-TTA-----TT--A
i Panthera_onca.PanOnc_flattened_line_3271               I 12 C 0
s Panthera_pardus.KV860321.1                              18460086 14 -  18783137 ---t---ct-t--gcct-tta-----tt--a
i Panthera_pardus.KV860321.1                             I 12 C 0
s Panthera_tigris.KE722367.1                               3970806 14 +   8748460 ---t---ct-t--gcct-tta-----tt--a
i Panthera_tigris.KE722367.1                             I 12 C 0
s Papio_anubis.CM001495.2                                   241164 15 - 183742232 C--C---CC-T--GCTT-GCA-----TC--A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7628 15 +     21308 C--C---CC-T--GCTT-GCA-----TC--A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288667 15 -  20919399 C--C---CC-T--GCTT-GCA-----TC--A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20283 15 -     27687 C--C---CC-T--GCTT-GCA-----TC--A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13419 15 +     16796 C--C---CC-T--GCTT-GCA-----TC--A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20229 15 -     23640 C--C---CC-T--GCTT-GCA-----TC--A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13398 14 +     78924 ---T---TC-T--GCCT-TTA-----TT--A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 10 C 0
s Perodicticus_ibeanus.k141_1921260                          24350 15 +     31479 T--C---TC-T--GCCT-CTA-----GT--A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16709 15 -     24908 T--C---TC-T--GCCT-CTA-----GT--A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37899 14 +     38305 T--C---CC-T--GCCT-CA------TC--A
i Perognathus_longimembris.PerPac_flattened_line_28053   I 1 C 0
s Peromyscus_maniculatus.KI615324.1                         245166 13 +  18517816 ---T--GCT-G---TTT-CA------TT--T
i Peromyscus_maniculatus.KI615324.1                      I 2 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30265 14 -     56120 T--C---TC-T--GTCT-CC------TT--A
i Petromus_typicus.PetTyp_scaffold_17301                 I 2 C 0
s Piliocolobus_badius.k141_2704958                             447 14 +     55023 ---C---CC-T--GCTT-GCA-----TC--A
i Piliocolobus_badius.k141_2704958                       I 1 C 0
s Piliocolobus_kirkii.k141_1310104                             448 14 +     40849 ---C---CC-T--GCTT-GCA-----TC--A
i Piliocolobus_kirkii.k141_1310104                       I 1 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252196 14 +  14605196 ---C---CC-T--GCTT-GCA-----TC--A
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1172 15 +     22231 C--C---CC-T--GCCT-CCA-----CC--A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 2
s Pithecia_albicans.k141_1239476                             63196 15 +    207309 C--C---CC-G--GCTT-CCA-----TC--C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4290 15 -     25401 C--C---CC-G--GCTT-CCA-----TC--C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30031 15 +     58159 C--C---CC-G--GCTT-CCA-----TC--C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30307 15 +     63561 C--C---CC-G--GCTT-CCA-----TC--C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30070 15 +     51148 C--C---CC-G--GCTT-CCA-----TC--C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555037 15 -   4542175 C--C---CC-G--GCTT-CCA-----TC--C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30054 15 +     51125 C--C---CC-G--GCTT-CCA-----TC--C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6461 15 +     39866 C--C---CC-G--GCTT-CCA-----TC--A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1546 15 -      9282 C--C---CC-G--GCTT-CCA-----TC--A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40950 15 -     87950 C--C---CC-G--GCTT-CCA-----TC--A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41343 15 -     88961 C--C---CC-G--GCTT-CCA-----TC--A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6042 15 -     39403 C--C---CC-G--GCTT-CCA-----TC--A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          40994 15 +     87928 C--C---CC-G--GCTT-CCA-----TC--A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6039 15 -     60166 C--C---CC-G--GCTT-CCA-----TC--A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12975 15 -     67232 C--C---CC-G--GCTT-CCA-----TC--A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40891 15 -     90634 C--C---CC-G--GCTT-CCA-----TC--A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42359 15 +     89403 C--C---CC-G--GCTT-CCA-----TC--A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175904 15 - 189387572 c--c---cc-T--GCTT-CCA-----TC--A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190722 15 -   9816681 C--C---CC-T--GCTT-CCA-----TC--A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25545 14 +     69807 ---C---CC-T--GCTT-GCA-----TC--A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42740 14 -     80239 ---C---CC-T--GCTT-GCA-----TC--A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980934 15 +   4620579 t--c---tc-t--gcct-cca-----tg--a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564401 15 -   2598838 t--c---tc-t--gcct-cca-----tc--a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2037 15 -      7103 T--C---TC-T--GCCT-CCA-----TC--A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2634 15 -     11706 T--C---TC-T--GCCT-CCA-----TC--A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6370 15 -     30655 T--C---TC-T--GCCT-CCA-----TC--A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32695 15 +     46564 T--C---TC-T--GCCT-CCA-----TC--A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92966 15 -     98465 T--C---TC-T--GCCT-CCA-----TC--A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6603 15 +     35169 T--C---TC-T--GCCT-CCA-----TC--A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34493 11 +     52041 ---c---ct-g---ttt-t-------tc--t
i Psammomys_obesus.NESX01036366.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3023 14 -     18639 ---C---CC-T--GCTT-TTG-----TC--A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839184 15 -  28871421 t--c---tc-t--gcct-cca-----tc--a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535750 15 -   4952924 t--c---tc-t--gcct-cca-----tc--a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097402 14 +  38429054 ---t---ct-t--gcct-tta-----tt--a
i Puma_concolor.QAVW01001104.1                           I 11 C 0
s Pygathrix_cinerea.k141_1153803                             24955 14 +     91421 ---C---CC-T--GCTT-GGA-----TC--A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151448 14 -   7812017 ---C---CC-T--GCTT-GGA-----TC--A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5825 14 +     72585 ---C---CC-T--GCTT-GGA-----TC--A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020938 12 -  90668790 ---C---CT-A---TTT-TG------TC--T
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913146 15 +   3329780 T--C---CC-T--GCCT-CCA-----TC--A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26765 14 +     27361 ---C---CC-T--GCTT-GCA-----TC--A
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120132 14 + 195417433 ---C---CC-T--GCTT-GCA-----TC--A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234373 14 -   7961872 ---C---CC-T--GCTT-GCA-----TC--A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73166 15 -    116970 T--C---TC-T--GCCT-CCA-----TC--A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2115 15 +     27962 C--C---CC-T--GCTT-CCG-----TC--A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2122 15 +      6077 C--C---CC-T--GCTT-CCG-----TC--A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2160 13 +      5971 C--C---CC-T--GCTT-CC-------C--A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2214 13 +      5932 C--C---CC-T--GCTT-CC-------C--A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               397 13 -      4390 C--C---CC-T--GCTT-CC-------G--A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389463 15 - 209938924 C--C---CC-T--GCTT-CCG-----TC--A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2162 13 +      5979 C--C---CC-T--GCTT-CC-------C--A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2509 15 -      4301 C--C---CC-T--GCTT-CCG-----TC--A
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236621 14 +   5703754 C--C---CC-T--GCTT-CC------TC--A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6211 14 +     21866 C--C---CC-T--GCTT-CC------TC--A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114348 15 +    313613 T--C---CC-T--CCCT-TGA-----TC--A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23272 14 +     27374 ---C---CC-T--GCTT-GCA-----TC--A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26791 14 +     58920 ---C---CC-T--GCTT-GCA-----TC--A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13287 14 -     45317 ---C---CC-T--GCTT-GCA-----TC--A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20945 14 -     42441 ---C---CC-T--GCTT-GCA-----TC--A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23625 14 -     29113 ---C---CC-T--GCTT-GCA-----TC--A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26694 14 -     48123 ---C---CC-T--GCTT-GCA-----TC--A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47030 13 +     77746 ---C---CCTG---TTG-TA------TT--T
i Sigmodon_hispidus.SigHis_scaffold_20193                I 2 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856671 15 -   1910179 T--C---CC-C--GCCT-CCA-----TC--A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 5
s Spermophilus_dauricus.KZ294078.1                         1866649 12 +   3870691 -------TC-T--GACT-CC------TC--T
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4835 14 -     97271 ---T---CC-T--GCCT-TTA-----TC--A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123243 13 +    196729 ---T---CC-T--GCCT-GTA-----TT---
i Suricata_suricatta.SurSur_flattened_line_6629          I 39 I 7
s Symphalangus_syndactylus.tarseq_199                       389208 15 +   1523678 C--T---CC-T--GCTT-CCA-----TC--A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                11992 15 +     22964 T--C---CC-T--GTCT-CCA-----TT--A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1018 15 +      5583 T--C---CC-T--GCCC-ACA-----TC--A
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 30 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189921 14 +    199430 ---C---CC-T--GCCT-CCA-----TC--A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 4
s Tapirus_terrestris.TapTer_scaffold_755                    103875 14 -    539355 ---C---CC-T--GCCT-CCA-----TC--A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 4
s Tarsius_lariang.k141_1780720                                5236 15 +      6850 T--T---CC-T--GCCT-CCA-----TC--A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5277 15 +     20590 T--T---CC-T--GCCT-CCA-----TC--A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351150 15 - 186847797 C--C---CC-T--GCTT-GCA-----TC--A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22590 14 -     33621 T--C---TC-T--GTCT-CC------TC--A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 1 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18150 15 -     31044 C--C---CT-T--GGCC-CCA-----TC--A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478032 15 -    610378 T--C---CC-T--GCCT-CCA-----TC--G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18836 14 +     26378 ---C---CC-T--GCTT-GCA-----TC--A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31500 14 -     78344 ---C---CC-T--GCTT-GCA-----TC--A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18157 14 +     25722 ---C---CC-T--GCTT-GCA-----TC--A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26382 14 -     62838 ---C---CC-T--GCTT-GCA-----TC--A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26499 14 +     46913 ---C---CC-T--GCTT-GCA-----TC--A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7305 14 -     28527 ---C---CC-T--GCTT-GCA-----TC--A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28321 14 -     64340 ---C---CC-T--GCTT-GCA-----TC--A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26358 14 -     63452 ---C---CC-T--GCTT-GCA-----TC--A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7801 14 +     22490 ---C---CC-T--GCTT-GCA-----TC--A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1229 14 -      6147 ---C---CC-T--GCTT-GCA-----TC--A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8203 14 -     13050 ---C---CC-T--GCTT-GCA-----TC--A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253442 14 -   6242583 ---C---CC-T--GCTT-GCA-----TC--A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59193 14 +     59866 ---C---CC-T--GCTT-GCA-----TC--A
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832467 14 -   4065304 t--t---cc-t--gcc--cCA-----TC--A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6781 14 -     70247 T--T---CC-T--GCC--CCA-----TC--A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     553 15 -     21056 T--C---CC-C--GCCT-TAA-----TC--A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 5
s Ursus_maritimus.KK499267.1                                180178 10 +   5085361 ---C---CC-T--GCCT-TT-----------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23579 15 -     30710 T--C---TC-T--GCCT-CCA-----TC--A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22486 15 -    147434 T--C---TC-T--GCCT-CCA-----TC--A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103326 14 -    112863 ---C---TC-T--GCTT-TTA-----TC--A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 3
s Xerus_inauris.XerIna_scaffold_2302                        172432 12 -    224448 -------CC-T--GTCT-CC------TC--T
i Xerus_inauris.XerIna_scaffold_2302                     I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27210 14 -     86975 ---C---CC-T--GCCT-TTA-----TC--A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1687 13 +      2695 ---C---CC-T--ACCT-CA------TC--A
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 1 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            601290 487 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                  9714 487 +     15858 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Pteronotus_parnellii.KE847780.1                            50154 13 -     66298 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786  8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3424 11 +     36723 G-TG-G-------TAG-T----AG---A
s Acinonyx_jubatus.LLWD01001279.1                           811153  4 +   1699592 G-TT-G----------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 12
s Acomys_cahirinus.AcoCah_scaffold_21377                     18210 10 +     63021 G-TG-G-------TAG-C----T----G
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413682  4 +  29979442 G-TT-G----------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 12
s Ailurus_fulgens.LNAC01001112.1                            213790  4 +    347723 G-TT-G----------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 12
s Allactaga_bullata.AllBul_scaffold_20030                    16325  5 -     61208 G-TT-G-------T--------------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 6
s Allenopithecus_nigroviridis.k141_3755588                   45819 11 +     53615 G-TG-G-------TAG-T----AC---A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41758 11 +     44087 G-TG-G-------TAG-T----AC---A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14397 11 -     21945 G-CG-G-------TAG-T----AC---A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16074 11 +     32033 G-TG-G-------TAG-T----AC---A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70521 11 -     84148 G-TG-G-------CAG-G----AG---A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42754 11 -     78289 G-TG-G-------CAG-G----AG---A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42200 11 +     55831 G-TG-G-------CAG-G----AG---A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40641 11 -     64179 G-TG-G-------CAG-G----AG---A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22288 11 -     24835 G-TG-G-------CAG-G----AG---A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39271 11 +     45454 G-TG-G-------CAG-G----AG---A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44969 11 +     70886 G-TG-G-------CAG-G----AG---A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7094 11 +     30854 G-TG-G-------CAG-G----AG---A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31233 11 +     42133 G-TG-G-------CAG-G----AG---A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175014 11 -    412891 G-TT-G-------TGA-T----AG---G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49043 11 -     65372 G-TG-G-------CAG-G----AG---G
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42790 11 +     43593 G-TG-G-------CAG-G----AG---G
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670803 11 +   5030052 G-TG-G-------CAG-G----AG---G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22445 11 -     23494 G-TG-G-------CAG-G----AG---G
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7581 11 +      8415 G-TG-G-------CAG-G----AG---G
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14352 11 -     32367 A-CT-T-------TAG-T----AG---A
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3301 11 -     15198 G-TT-G-------TGA-C----AG---A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273033 11 +  21539123 T-TG-G-------CTG-G----AG---A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9200 11 +     48076 G-TG-G-------CTG-G----AG---A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4337 11 -     28759 G-TG-G-------CTG-G----AG---A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31890 11 +     44353 C-TG-G-------CTG-G----AG---A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47261 11 -     71267 G-TG-G-------CTG-G----AG---A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21320 11 -     33135 C-TG-G-------CTG-G----AG---A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4532 11 +     11645 G-TT-G-------TAG-T----AG---A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4538 11 -     19611 G-TT-G-------TAG-T----AG---A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6224 11 +     28062 G-TG-A-------CAG-G----AG---A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41518 11 -     91139 G-TG-A-------CAG-G----AG---A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19044 11 +     95584 G-TG-A-------CAG-G----AG---A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18957 11 +    119600 G-TG-A-------CAG-G----AG---A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8431 11 +     18648 G-TG-A-------CAG-G----AG---A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8092 11 -     13885 G-TG-A-------CAG-G----AG---A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16792 11 +     17162 G-TG-A-------CAG-G----AG---A
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451747 11 + 189096842 G-TG-A-------CAG-G----AG---A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              18040 11 -     18408 G-TG-A-------CAG-G----AG---A
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503713  1 +  60362399 -----------------T----------
i CanFam4.chr16                                          I 3 I 11
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7349  1 -     23171 -----------------T----------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 3 I 11
s Canis_lupus_dingo.QKWQ01000480.1                          220692  1 +   9314153 -----------------T----------
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 I 11
s Canis_lupus_familiaris.chr16                            41613827  1 +  59632846 -----------------T----------
i Canis_lupus_familiaris.chr16                           I 3 I 11
s Canis_lupus_orion.HG994398.1                            45105408  1 -  63665305 -----------------T----------
i Canis_lupus_orion.HG994398.1                           I 3 I 11
s Carlito_syrichta.NW_007259797.1                           268559  7 +    496798 G-TT-G-------TGG------------
i Carlito_syrichta.NW_007259797.1                        C 0 I 57
s Carollia_perspicillata.CarPer_scaffold_170178               3593  7 +      5315 G-TT-G-------TGA------------
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 4
s Cavia_aperea.AVPZ01000300.1                              4994290  6 +  23392119 a-aT-G-------TA-------------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997732  6 +  23407841 a-aT-G-------TA-------------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60833  6 -     66877 A-AT-A-------TA-------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3324 11 -     12580 G-TG-A-------CAG-G----AG---A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41209 11 +     53515 G-TG-A-------CAG-G----AG---A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369416 11 -  26074798 G-TG-A-------CAG-G----AG---G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6305 11 -     34880 G-TG-A-------CAG-G----AG---G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65400 11 -     89041 G-TG-A-------CAG-G----AG---G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          536 11 -      5494 G-TT-G-------TGA-T----AG---A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490489  7 -  27778364 -----------------T----AGTAGA
i Ceratotherium_simum.JH767749.1                         I 4 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17322  7 +     27315 -----------------T----AGTAGA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 4 I 3
s Cercocebus_atys.KQ010504.1                                138998 11 -   4669795 G-TG-G-------TAA-T----AG---A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42738 11 +     47900 G-TG-G-------TAA-T----AG---A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42571 11 -     44860 G-TG-G-------TAA-T----AG---A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42554 11 -    148725 G-TG-G-------TAA-T----AG---A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9811 11 -     17524 G-TG-G-------TAG-T----AC---A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25533 11 -     34525 G-TG-G-------TGG-T----AC---A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30010 11 -     45857 G-TG-G-------TAG-T----AC---A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23502 11 +     70610 G-TG-G-------TAG-T----AC---A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20427 11 +     36323 G-TG-G-------TAG-T----AC---A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11142 11 -     19938 A-CT-G-------TGG-T----GG---A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28967 11 -     33796 G-TT-G-------TAG-T----AG---A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3483 11 -     15404 G-TT-G-------TAG-T----AG---A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7307 11 -     32913 G-TG-A-------CAG-G----AG---A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17720 11 -     40346 G-TG-A-------CAG-G----AG---A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17975 11 +    216457 G-TG-A-------CAG-G----AG---A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17768 11 +     39636 G-TG-A-------CAG-G----AG---A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2132 11 +      5346 G-TG-A-------CAG-G----AG---A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40864 11 -    112038 G-TG-A-------CAG-G----AG---A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6436 11 +     34062 G-TG-A-------CAG-G----AG---A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341324 11 +  18827391 G-TG-G-------TAG-T----AC---A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7869 11 -     44032 G-TG-G-------TAG-T----AC---G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302649 11 - 135778131 G-TG-G-------TAG-T----AC---A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10201  1 +     15858 ---------------------------G
i Choloepus_didactylus.ChoDid_scaffold_70559             I 487 C 0
s Choloepus_hoffmanni.KN194906.1                            601777  1 -    839153 ---------------------------G
i Choloepus_hoffmanni.KN194906.1                         I 487 C 0
s Colobus_angolensis.KN981557.1                             407082 15 -   2368649 G-TG-G-------TAG-TAGACAG---A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376960 15 - 200372422 G-TG-G-------TAG-TAGACAG---A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                507 15 -     84244 G-TG-G-------TAG-TAGACAG---A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805572  5 +  53390261 A-TT-G-------T--------------
i Condylura_cristata.JH655891.1                          C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1076 11 -      8242 G-TT-T-------TAG-T----AT---T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40592 10 -     83289 A-TG-G-------TAC-T----T----A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113054 10 - 224834208 G-TG-G-------TGG-T----T----G
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2613  4 +     87169 G-T-TG----------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 12
s Ctenodactylus_gundi.CteGun_scaffold_65                    643093  7 -   1526836 A-TT-G-------TAG------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 4
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3316  6 +     50838 A-AA-G-------TA-------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2181  6 +     36344 A-AT-G-------TA-------------
i Cuniculus_paca.CunPac_flattened_line_7025              I 268 C 0
s Dasypus_novemcinctus.JH564415.1                          2108479 11 -   2246927 C-TT-G-------TGG-T----AG---A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290903 11 +  12879189 G-TT-G-------TGG-T----AG---A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863043 11 -  20541912 g-tT-G-------TGA-C----GG---A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662781  7 -   1390856 -----------------T----AGTAGA
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 4 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                  137566  7 -    198055 -----------------T----AGTAGA
i Diceros_bicornis.DicBicMic_scaffold_5955               I 4 I 3
s Dinomys_branickii.DinBra_scaffold_10381                    96791  6 -    115145 A-AT-G-------TT-------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948669 11 -  37912305 A-TT-A-------CAG-T----GG---A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3616 11 -     10735 A-TT-A-------CAG-T----GG---A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8233  6 +     14636 A-AT-G-------TA-------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852234 11 - 111700974 G-TG-G-------TAG-A----AG---A
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4606 11 +     19438 G-TT-G-------TGG-T----AG---A
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         7814856 11 -  10337057 G-TT-G-------CTG-T----AG---A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29335 10 +    110024 G-TG-G-------TAG-C----T----G
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11303 10 +     18970 G-TG-G-------TAG-C----T----G
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914446  4 +  41312741 G-TC-G----------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 12
s Eptesicus_fuscus.JH977646.1                             12576673 11 +  14770903 G-TT-G-------CAA-T----AG---A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039769  7 -   4378816 -----------------T----AGTAGA
i Equus_asinus.JREZ01000139.1                            I 4 I 3
s Equus_caballus.CM000403.2                               21373703  7 +  39960074 -----------------T----AGTAGA
i Equus_caballus.CM000403.2                              I 4 I 3
s Equus_przewalskii.KK951119.1                              410489  7 -    498745 -----------------T----AGTAGA
i Equus_przewalskii.KK951119.1                           I 4 I 3
s Erythrocebus_patas.Contig38                               260847 11 +  21539334 G-TG-G-------TAG-T----AC---A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13075 11 -     24895 G-TT-G-------TAG-T----AG---A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40784 11 -     70999 G-TT-G-------TAG-T----AG---A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84746 11 +    112731 G-TT-G-------TAG-T----AG---A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41319 11 +     68309 G-TT-G-------TAG-T----AG---A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51641 11 -     65740 G-TT-G-------TAG-T----AG---A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22274 11 -     75513 G-TT-G-------TAG-T----AG---A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46467 11 -     97555 G-TT-G-------TAG-T----AG---A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3194 11 +     30972 G-TT-G-------TAG-T----AG---A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40914 11 -     52037 G-TT-G-------TAG-T----AG---A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57318 11 -    111500 G-TT-G-------TAG-T----AG---A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245065  4 - 206538554 G-TT-G----------------------
i Felis_catus.CM001381.2                                 C 0 I 12
s Felis_catus_fca126.CM031415.1                          185114851  4 - 205367284 G-TT-G----------------------
i Felis_catus_fca126.CM031415.1                          C 0 I 12
s Felis_nigripes.FelNig_flattened_line_31944                 25953  4 -     30238 G-TT-G----------------------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 12
s Galago_moholi.ctg3793                                     122928 11 -    137831 C-TT-G-------TCG-T----AG---G
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6473 11 +     22493 C-TT-G-------TCG-T----AG---G
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18525 11 -     32986 C-TT-G-------TTG-T----AG---G
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17388 11 +     18121 G-TT-G-------TAG-T----AG---A
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32251 11 -     36801 A-TT-T-------TAG-T----AG---A
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3763 11 -      8343 G-TG-G-------TAG-T----AG---A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252774 11 - 186649187 G-TG-G-------TAG-T----AG---A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11566 11 +     11903 A-TT-T-------TAG-T----AG---A
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13002 11 -     40692 G-TT-G-------TAG-T----AG---A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34403 11 +     49394 G-TT-G-------TAG-T----AG---A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59272 11 -     66874 G-TT-G-------TAG-T----AG---A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8145 11 -     42923 G-TT-G-------TAG-T----AG---A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15145 11 -     53142 G-TT-G-------TAG-T----AG---A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29103  1 -    327341 ---------------------------A
i Helogale_parvula.HelPar_flattened_line_2585            I 7 I 5
s Heterocephalus_glaber.JH602082.1                         1925375  6 -  22651954 A-AT-G-------TA-------------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49150 10 +     49977 --CT-G-------TGA-T----AG---A
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140763 10 -    630532 --TG-T-------TAG-T----AG---A
i Hoolock_leuconedys.ctg274                                 I 1 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67779  1 +     83186 ---------------------------A
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 7 I 5
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69667  7 +    143317 ATAT-G-------TA-------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3797 11 +     12352 G-TG-T-------TAG-T----AG---A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10980 11 +     55766 G-TG-T-------TAG-T----AG---A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050576 11 + 191637585 G-TG-T-------TAG-T----AG---A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799454 11 +  11177569 G-TG-T-------TAG-T----AG---A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_2415743                                     655 11 +     11955 G-TT-G-------TAG-T----AG---A
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237512  5 +   9596543 T-TT-G-------T--------------
i Jaculus_jaculus.JH725527.1                             C 0 I 6
s Lagothrix_lagothricha.k141_246028                          41575 11 +    110728 G-CG-G-------CAG-G----AG---A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60148 11 -     65777 G-TT-G-------CAA-T----AG---A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757793 11 +  30322482 G-TT-G-------TAG-T----AG---A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2240 11 -     13097 G-TG-A-------CAG-G----AG---A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2191 11 +      5940 G-TG-A-------CAG-G----AG---A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1825 11 -      5717 G-TG-A-------CAG-G----AG---A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8441 11 -     11567 G-TG-A-------CAG-G----AG---A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9822 11 -     12945 G-TG-A-------CAG-G----AG---A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7324 11 +     29618 G-TT-G-------TAC-T----AG---A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7321 11 +     31569 G-TT-G-------TAC-T----AG---A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7332 11 +     24756 G-TT-G-------TAC-T----AG---A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7330 11 +     16388 G-TT-G-------TAC-T----AG---A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811827  4 -   3914936 G-TT-G----------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 12
s Lepus_americanus.LepAme_scaffold_56121                     16173 11 +     24238 G-TT-G-------TGG-T----AG---A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               330951 11 -   1826925 G-TG-G-------TAG-T----AG---A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8687 11 +     19643 C-TT-G-------TCA-T----AG---A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042348 11 -   6120653 C-TT-G-------TCA-T----AG---A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078591 11 +  43346337 G-TT-G-------TGG-T----AG---A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41612982  1 +  59628241 -----------------T----------
i Lycaon_pictus.CM007581.1                               I 3 I 11
s Macaca_arctoides.k141_1757516                              43268 11 -     61512 G-TG-G-------TAG-T----AG---A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370929 11 -  60120075 G-TG-G-------TAG-T----AG---A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23184 11 +     30207 G-TG-G-------TAG-T----AG---A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20287 11 -     24934 G-TG-G-------TAG-T----AG---A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23136 11 +     30527 G-TG-G-------TAG-T----AG---A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34325 11 -     50087 G-TG-G-------TAG-T----AG---A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44096 11 +     51645 G-TG-G-------TAG-T----AG---A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413265 11 - 187317192 G-TG-G-------TAG-T----AG---A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397488 11 +  25927173 G-TG-G-------TAG-T----AG---A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46652 11 -     62418 G-TG-G-------TAG-T----AG---A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23307 11 +     24253 G-TG-G-------TAG-T----AG---A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43127 11 +     59329 G-TG-G-------TAG-T----AG---A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269055 11 +    668171 G-TG-G-------TAG-T----AG---A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20242 11 +     21031 G-TG-G-------TAG-T----AG---A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  839 11 +     17132 G-TG-G-------TAG-T----AG---A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221570 11 -    270270 A-TT-G-------TGG-T----AG---A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320339 11 +  24302211 G-TG-G-------TAG-T----AG---A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355171 11 -    752769 G-TG-G-------TAG-T----AG---A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499303 11 +  40650429 A-TG-T-------TAG-T----AG---A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148771 11 +    207569 G-TT-T-------TGG-T----TG---A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24320  4 -     74585 G-TC-A----------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 12
s Meriones_unguiculatus.MerUng_scaffold_7390                 46960 10 -    140813 G-TG-G-------TAG-T----T----G
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427607 10 +  29670104 G-TA-G-------TAG-T----T----G
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8203 11 +     17804 G-TG-A-------CAG-G----AG---A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8987 11 -     12984 G-TG-A-------CAG-G----AG---A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16938 11 -     26561 G-TG-A-------CAG-G----AG---A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982934 11 +  93316391 G-TT-G-------TAG-T----AG---A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43328 12 +    145209 G-TG-G-------TAGCC----AG---A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182987 11 +    200668 G-CA-G-------AGA-C----AG---T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960730 10 +  27267610 G-TG-G-------TAG-C----G----G
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361102 11 -   8254450 G-TT-G-------CAT-T----AG---A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40003 11 -     48117 G-TT-G-------CAT-T----AG---A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20366 11 -     27822 G-TG-G-------TAG-T----AC---A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6838  4 +     27589 G-TT-G----------------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 12
s Mirza_zaza.k141_766280                                     50725 11 -     62432 G-TT-G-------TAG-T----AG---A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177141 11 +    366855 G-TT-G-------TGA-T----AG---A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16856  1 -     63510 ---------------------------A
i Mungos_mungo.MunMun_flattened_line_18455               I 7 I 5
s Murina_feae.MurFea_scaffold_17764                          37017 11 +     47283 G-TT-G-------CAA-C----AG---A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   5036 10 +      5579 G-TG-T-------TAG-T----T----G
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685739 10 + 129401213 G-TG-T-------TAG-T----T----G
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39495057 10 + 130317789 G-TG-T-------TAG-T----T----G
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80853 11 -     86153 G-TT-T-------TAG-T----AG---A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353472  4 +  14710649 G-TC-G----------------------
i Mustela_putorius.JH418006.1                            C 0 I 12
s Myotis_brandtii.KE162005.1                               9791062 11 +  10118263 G-TT-G-------CAA-T----AG---A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385424 11 +   6019432 G-TG-G-------CAA-T----AG---A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381244 11 +   4330536 G-TT-G-------CAA-T----AG---A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3803 11 +      3929 G-TT-G-------CAA-T----AG---A
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117913 11 +    130748 G-CT-G-------TGG-T----AG---G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26945 11 +     34575 G-TG-G-------TAG-G----AG---A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467430  4 -  31847680 G-TT-G----------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 12
s Noctilio_leporinus.NocLep_scaffold_7894                   125951 11 -    149072 G-TT-G-------TGA-T----AC---G
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51686 11 -    132029 G-TG-T-------TAG-T----AG---A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7781 11 -     16345 G-TG-T-------TAG-T----AG---A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13666 11 +     22201 G-TG-T-------TAG-T----AG---A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411950 11 -  22158432 G-TG-T-------TAG-T----AG---A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24064 11 -     54323 G-TG-T-------TAG-T----AG---A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196584  1 +   9404916 -----------------T----------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 I 11
s Nycticebus_bengalensis.LG01                             93634699 11 + 196305487 C-TT-G-------TCA-T----AG---G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1457 11 -      3937 C-TT-G-------TCA-T----AG---G
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562938 11 - 199412804 C-TT-G-------TCA-T----AG---G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549558 11 -   3988456 G-TT-G-------TAG-T----AG---A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045822  6 -  11899542 A-AC-G-------TA-------------
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450026  4 +   2017862 G-TT-G----------------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 12
s Ondatra_zibethicus.OndZib_scaffold_7387                    91087 10 -    140218 G-TG-G-------TAG-C----C----G
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1468  9 -     41509 g-ta-g-------agg-t----t-----
i Onychomys_torridus.OnyTor_scaffold_28377               n 10 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11697 11 -     14239 G-TT-G-------AAG-T----AG---A
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102026 11 - 174332312 G-TT-G-------TGG-T----AG---A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37621  1 +    559221 -----------------T----------
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 I 11
s Otolemur_crassicaudatus.k141_649260                        38081 11 -     51505 C-TT-G-------TGG-T----AG---G
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351084 11 +   1103335 C-TT-G-------TCG-T----AG---G
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470779 11 - 189151597 G-TG-G-------TAG-T----AG---A
i Pan_troglodytes.CM009242.2                             I 15 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22774  4 -    230217 G-TT-G----------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 12
s Panthera_pardus.KV860321.1                              18460100  4 -  18783137 G-TT-G----------------------
i Panthera_pardus.KV860321.1                             C 0 I 12
s Panthera_tigris.KE722367.1                               3970820  4 +   8748460 G-TT-G----------------------
i Panthera_tigris.KE722367.1                             C 0 I 12
s Papio_anubis.CM001495.2                                   241179 11 - 183742232 G-TG-G-------TAG-T----AG---A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7643 11 +     21308 G-TG-G-------TAG-T----AG---A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288682 11 -  20919399 G-TG-G-------TAG-T----AG---A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20298 11 -     27687 G-TG-G-------TAG-T----AG---A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13434 11 +     16796 G-TG-G-------TAG-T----AG---A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20244 11 -     23640 G-TG-G-------TAG-T----AG---A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13412  4 +     78924 G-TG-G----------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 12
s Perodicticus_ibeanus.k141_1921260                          24365 11 +     31479 C-TT-G-------TTA-T----AG---G
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16724 11 -     24908 C-TT-G-------TTA-T----AG---G
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37913 11 +     38305 A-TT-A-------TAG-T----AG---A
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245179 10 +  18517816 G-AG-G-------TAG-C----T----G
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30279  6 -     56120 A-AT-G-------TA-------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             461 11 +     55023 G-TG-G-------TAG-T----AG---A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             462 11 +     40849 G-TG-G-------TAG-T----AG---A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252210 11 +  14605196 G-TG-G-------TAG-T----AG---A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1189 18 +     22231 A-CT-GGACCAATTAA-T----AG---A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 2 C 0
s Pithecia_albicans.k141_1239476                             63211 11 +    207309 G-TG-A-------CAG-G----AG---A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4305 11 -     25401 G-TG-A-------CAG-G----AG---A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30046 11 +     58159 G-TG-A-------CAG-G----AG---A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30322 11 +     63561 G-TG-A-------CAG-G----AG---A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30085 11 +     51148 G-TG-A-------CAG-G----AG---A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555052 11 -   4542175 G-TG-A-------CAG-G----AG---A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30069 11 +     51125 G-TG-A-------CAG-G----AG---A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6476 11 +     39866 G-TG-A-------CAG-G----AG---A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1561 11 -      9282 G-TG-A-------CAG-G----AG---A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40965 11 -     87950 G-TG-A-------CAG-G----AG---A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41358 11 -     88961 G-TG-A-------CAG-G----AG---A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6057 11 -     39403 G-TG-A-------CAG-G----AG---A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41009 11 +     87928 G-TG-A-------CAG-G----AG---A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6054 11 -     60166 G-TG-A-------CAG-G----AG---A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      12990 11 -     67232 G-TG-A-------CAG-G----AG---A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40906 11 -     90634 G-TG-A-------CAG-G----AG---A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42374 11 +     89403 G-TG-A-------CAG-G----AG---A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175919 11 - 189387572 G-TG-G-------TAG-T----AG---A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190737 11 -   9816681 G-TG-G-------TAG-T----AG---A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25559 11 +     69807 G-TG-G-------TAG-G----AG---A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42754 11 -     80239 G-TG-G-------TAG-G----AG---A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980949 11 +   4620579 g-tT-G-------TAG-T----AG---A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564416 11 -   2598838 g-TT-G-------TAG-T----AG---A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2052 11 -      7103 G-TT-G-------TAG-T----AG---A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2649 11 -     11706 G-TT-G-------TAG-T----AG---A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6385 11 -     30655 G-TT-G-------TAG-T----AG---A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32710 11 +     46564 G-TT-G-------TAG-T----AG---A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92981 11 -     98465 G-TT-G-------TAG-T----AG---A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6618 11 +     35169 G-TT-G-------TAG-T----AG---A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34504 10 +     52041 g-tg-g-------tAG-T----T----G
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3037  4 -     18639 G-TC-A----------------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 12
s Pteropus_alecto.KB030862.1                               5839199 11 -  28871421 G-TT-G-------TGG-T----AG---A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535765 11 -   4952924 G-TT-G-------TGG-T----AG---A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097416  4 +  38429054 G-TT-G----------------------
i Puma_concolor.QAVW01001104.1                           C 0 I 12
s Pygathrix_cinerea.k141_1153803                             24969 11 +     91421 G-TG-G-------TAG-G----AG---A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151462 11 -   7812017 G-TG-G-------TAG-G----AG---A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5839 11 +     72585 G-TG-G-------TAG-G----AG---A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020950 10 -  90668790 G-TG-G-------GAA-T----T----G
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913161 11 +   3329780 G-TT-A-------TGG-T----AG---A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26779 11 +     27361 G-TG-G-------TAG-G----AG---A
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120146 11 + 195417433 G-TG-G-------TAG-G----AG---A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234387 11 -   7961872 G-TG-G-------TAG-G----AG---A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73181 11 -    116970 G-TT-G-------TGG-T----AG---A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2130 11 +     27962 G-TG-A-------CAG-G----AG---A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2137 11 +      6077 G-TG-A-------CAG-G----AG---A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2173 11 +      5971 G-TG-A-------CAG-G----AG---A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2227 11 +      5932 G-TG-A-------CAG-G----AG---A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               410 11 -      4390 G-TG-A-------CAG-G----AG---A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389478 11 - 209938924 G-TG-A-------CAG-G----AG---A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2175 11 +      5979 G-TG-A-------CAG-G----AG---A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2524 11 -      4301 G-TG-A-------CAG-G----AG---A
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236635 11 +   5703754 G-TG-A-------CAG-G----AG---G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6225 11 +     21866 G-TG-A-------CAG-G----AG---G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114363  5 +    313613 G-TT-G-------T--------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 3
s Semnopithecus_entellus.k141_158471                         23286 11 +     27374 G-TG-G-------TAG-G----AG---A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26805 11 +     58920 G-TG-G-------TAG-G----AG---A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13301 11 -     45317 G-TG-G-------TAG-G----AG---A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20959 11 -     42441 G-TG-G-------TAG-G----AG---A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23639 11 -     29113 G-TG-G-------TAG-G----AG---A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26708 11 -     48123 G-TG-G-------TAG-G----AG---A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47043 10 +     77746 A-TG-G-------TAC-T----T----G
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856691  3 -   1910179 ----------------------AG---A
i Solenodon_paradoxus.SolPar_flattened_line_126          I 5 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123263  1 +    196729 ---------------------------A
i Suricata_suricatta.SurSur_flattened_line_6629          I 7 I 5
s Spermophilus_dauricus.KZ294078.1                         1866661  8 +   3870691 A-TG-T-------TAG-T----------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525              4849  4 -     97271 G-TT-G----------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 12
s Symphalangus_syndactylus.tarseq_199                       389223 11 +   1523678 G-TG-T-------TAA-T----AG---A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12007 11 +     22964 G-TT-G-------CAA-T----AG---A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1033 11 +      5583 G-CT-G-------TGG-T----AG---G
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189939  7 +    199430 -----------------T----AGCAGG
i Tapirus_indicus.TapInd_scaffold_7432                   I 4 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    103893  7 -    539355 -----------------T----AGTAGG
i Tapirus_terrestris.TapTer_scaffold_755                 I 4 I 3
s Tarsius_lariang.k141_1780720                                5251 11 +      6850 G-TT-G-------TGG-T----AG---A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5292 11 +     20590 G-TT-G-------TGG-T----AG---A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351165 11 - 186847797 G-TG-G-------TAG-T----AG---A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22604  6 -     33621 A-AT-G-------TA-------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18165 11 -     31044 G-CT-G-------TGG-T----AG---A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478047 11 -    610378 G-TT-G-------TGA-C----AG---A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18850 11 +     26378 G-TG-G-------TAG-G----AG---A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31514 11 -     78344 G-TG-G-------TAG-G----AC---A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18171 11 +     25722 G-TG-G-------TAG-G----AG---A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26396 11 -     62838 G-TG-G-------TAG-G----AG---A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26513 11 +     46913 G-TG-G-------TAG-G----AG---A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7319 11 -     28527 G-TG-G-------TAG-G----AG---A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28335 11 -     64340 G-TG-G-------TAG-G----AG---A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26372 11 -     63452 G-TG-G-------TAG-G----AG---A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7815 11 +     22490 G-TG-G-------TAG-G----AG---A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1243 11 -      6147 G-TG-G-------TAG-G----AG---A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8217 11 -     13050 G-TG-G-------TAG-G----AC---A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253456 11 -   6242583 G-TG-G-------TAG-G----AC---A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59207 11 +     59866 G-TG-G-------TAG-G----AG---A
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832481 11 -   4065304 G-TT-T-------TAG-T----AG---A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6795 11 -     70247 G-TT-T-------TAG-T----AG---A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     573  3 -     21056 ----------------------AG---A
i Uropsilus_gracilis.UroGra_scaffold_46687               I 5 C 0
s Ursus_maritimus.KK499267.1                                180188  4 +   5085361 G-TT-G----------------------
i Ursus_maritimus.KK499267.1                             C 0 I 12
s Varecia_rubra.k141_787544                                  23594 11 -     30710 G-TT-G-------TAG-T----AG---A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22501 11 -    147434 G-TT-G-------TAG-T----AG---A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103343  1 -    112863 -----------------T----------
i Vulpes_lagopus.VulLag_flattened_line_12041             I 3 I 11
s Xerus_inauris.XerIna_scaffold_2302                        172444  7 -    224448 G-TG-T-------TAG------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_17732         27224  4 -     86975 G-TT-G----------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 12
s Zapus_hudsonius.ZapHud_scaffold_230229                      1700  5 +      2695 G-TT-G-------T--------------
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 1
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Pteronotus_parnellii.KE847780.1                            50154 13 -     66298 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786  8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Manis_pentadactyla.KN006162.1                             219153  1 +    317179 I
e Manis_javanica.JSZB01003497.1                             671865  1 -    737560 I
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     385093  0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3435 3 +     36723 C---AC
s Acinonyx_jubatus.LLWD01001279.1                           811169 1 +   1699592 -----C
i Acinonyx_jubatus.LLWD01001279.1                        I 12 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18220 3 +     63021 T---AC
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413698 1 +  29979442 -----C
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 12 C 0
s Ailurus_fulgens.LNAC01001112.1                            213806 1 +    347723 -----C
i Ailurus_fulgens.LNAC01001112.1                         I 12 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45830 3 +     53615 C---AC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41769 3 +     44087 C---AC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14408 3 -     21945 C---AC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16085 3 +     32033 C---AC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70532 2 -     84148 T---A-
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42765 2 -     78289 T---A-
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42211 2 +     55831 T---A-
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40652 2 -     64179 T---A-
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22299 2 -     24835 T---A-
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39282 2 +     45454 T---A-
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44980 2 +     70886 T---A-
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7105 2 +     30854 T---A-
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31244 2 +     42133 T---A-
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175025 3 -    412891 C---AC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 5
s Aotus_azarae.k141_118258                                   49054 2 -     65372 T---A-
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42801 2 +     43593 T---A-
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670814 2 +   5030052 T---A-
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22456 2 -     23494 T---A-
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7592 2 +      8415 T---A-
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14363 3 -     32367 C---AC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3312 3 -     15198 C---AC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273044 2 +  21539123 T---A-
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9211 2 +     48076 T---A-
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4348 2 -     28759 T---A-
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31901 2 +     44353 T---A-
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47272 2 -     71267 T---A-
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21331 2 -     33135 T---A-
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4543 3 +     11645 C---CC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4549 3 -     19611 C---CC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6235 3 +     28062 T---AC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41529 3 -     91139 T---AC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19055 3 +     95584 T---AC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18968 3 +    119600 T---AC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8442 2 +     18648 T---G-
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8103 2 -     13885 T---A-
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16803 2 +     17162 T---G-
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451758 2 + 189096842 T---G-
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              18051 2 -     18408 T---G-
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503725 1 +  60362399 -----C
i CanFam4.chr16                                          I 11 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7361 1 -     23171 -----C
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 11 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220704 1 +   9314153 -----C
i Canis_lupus_dingo.QKWQ01000480.1                       I 11 C 0
s Canis_lupus_familiaris.chr16                            41613839 1 +  59632846 -----C
i Canis_lupus_familiaris.chr16                           I 11 C 0
s Canis_lupus_orion.HG994398.1                            45105420 1 -  63665305 -----C
i Canis_lupus_orion.HG994398.1                           I 11 C 0
s Carlito_syrichta.NW_007259797.1                           268623 3 +    496798 t---tc
i Carlito_syrichta.NW_007259797.1                        I 57 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3604 3 +      5315 C---AC
i Carollia_perspicillata.CarPer_scaffold_170178          I 4 C 0
s Cavia_aperea.AVPZ01000300.1                              4994296 1 +  23392119 -----C
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997738 1 +  23407841 -----C
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60839 1 -     66877 -----C
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3335 2 -     12580 T---G-
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41220 2 +     53515 T---G-
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369427 2 -  26074798 T---A-
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6316 2 -     34880 T---A-
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65411 2 -     89041 T---A-
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          547 3 -      5494 T---AC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490499 3 -  27778364 C---AC
i Ceratotherium_simum.JH767749.1                         I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17332 3 +     27315 C---AC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 3 C 0
s Cercocebus_atys.KQ010504.1                                139009 3 -   4669795 C---AC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42749 3 +     47900 C---AC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42582 3 -     44860 C---AC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42565 3 -    148725 C---AC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9822 3 -     17524 C---AC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25544 3 -     34525 C---AC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30021 3 -     45857 C---AC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23513 3 +     70610 C---AC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20438 3 +     36323 C---AC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11153 3 -     19938 C---CC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28978 3 -     33796 C---AC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3494 3 -     15404 C---AC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7318 3 -     32913 C---AC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17731 3 -     40346 C---AC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17986 3 +    216457 C---AC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17779 3 +     39636 C---AC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2143 3 +      5346 T---AC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40875 3 -    112038 T---AC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6447 3 +     34062 T---AC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341335 3 +  18827391 C---AC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7880 3 -     44032 C---AC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302660 3 - 135778131 C---AC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10202 3 +     15858 C---AC
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601778 3 -    839153 C---AC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407097 3 -   2368649 C---AC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376975 3 - 200372422 C---AC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                522 3 -     84244 C---AC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805580 3 +  53390261 C---AC
i Condylura_cristata.JH655891.1                          I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1087 3 -      8242 C---AC
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40602 3 -     83289 C---AC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113064 3 - 224834208 C---AC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2629 1 +     87169 -----T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 12 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643104 3 -   1526836 C---AC
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 4 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3322 1 +     50838 -----C
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2187 1 +     36344 -----C
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108490 3 -   2246927 C---AC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290914 3 +  12879189 C---GC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863054 3 -  20541912 C---AC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662791 3 -   1390856 C---AC
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137576 3 -    198055 C---AC
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96797 1 -    115145 -----C
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948680 3 -  37912305 C---AC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3627 3 -     10735 C---AC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8239 1 +     14636 -----C
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852245 3 - 111700974 A---AA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4617 3 +     19438 C---AC
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         7814867 3 -  10337057 T---AC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29345 3 +    110024 C---AC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11313 3 +     18970 C---AC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914462 1 +  41312741 -----C
i Enhydra_lutris.KZ291758.1                              I 12 C 0
s Eptesicus_fuscus.JH977646.1                             12576684 3 +  14770903 C---AT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039779 3 -   4378816 C---AC
i Equus_asinus.JREZ01000139.1                            I 3 C 0
s Equus_caballus.CM000403.2                               21373713 3 +  39960074 C---AC
i Equus_caballus.CM000403.2                              I 3 C 0
s Equus_przewalskii.KK951119.1                              410499 3 -    498745 C---AC
i Equus_przewalskii.KK951119.1                           I 3 C 0
s Erythrocebus_patas.Contig38                               260858 3 +  21539334 C---AC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13086 3 -     24895 C---AC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40795 3 -     70999 C---AC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84757 3 +    112731 T---AT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41330 3 +     68309 C---AC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51652 3 -     65740 C---AC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22285 3 -     75513 C---AC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46478 3 -     97555 C---AC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3205 3 +     30972 C---AC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40925 3 -     52037 C---AC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57329 3 -    111500 C---AC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245081 1 - 206538554 -----C
i Felis_catus.CM001381.2                                 I 12 C 0
s Felis_catus_fca126.CM031415.1                          185114867 1 - 205367284 -----C
i Felis_catus_fca126.CM031415.1                          I 12 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25969 1 -     30238 -----C
i Felis_nigripes.FelNig_flattened_line_31944             I 12 C 0
s Galago_moholi.ctg3793                                     122939 3 -    137831 C---AC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6484 3 +     22493 C---AC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18536 3 -     32986 C---AC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17399 3 +     18121 C---AC
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32262 3 -     36801 C---AC
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3774 3 -      8343 C---AC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252785 3 - 186649187 C---AC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11577 3 +     11903 T---AC
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13013 3 -     40692 C---AC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34414 3 +     49394 C---AC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59283 3 -     66874 C---AC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8156 3 -     42923 C---AC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15156 3 -     53142 C---AC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29109 1 -    327341 -----C
i Helogale_parvula.HelPar_flattened_line_2585            I 5 C 0
s Heterocephalus_glaber.JH602082.1                         1925381 1 -  22651954 -----C
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49160 3 +     49977 C---AC
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140773 3 -    630532 T---AC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67785 1 +     83186 -----C
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 5 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69674 1 +    143317 -----C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3808 3 +     12352 T---AC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10991 3 +     55766 T---AC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050587 3 + 191637585 T---AC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799465 3 +  11177569 T---AC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_2415743                                     666 3 +     11955 C---AC
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41586 2 +    110728 G---A-
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60159 3 -     65777 C---AT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757804 3 +  30322482 C---AC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2251 2 -     13097 T---A-
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2202 2 +      5940 T---A-
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1836 2 -      5717 T---A-
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8452 2 -     11567 T---A-
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9833 2 -     12945 T---A-
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7335 3 +     29618 C---AC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7332 3 +     31569 C---AC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7343 3 +     24756 C---AC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7341 3 +     16388 C---AC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811843 1 -   3914936 -----T
i Leptonychotes_weddellii.KB714746.1                     I 12 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16184 3 +     24238 C---AC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 4
s Lophocebus_aterrimus.ctg367                               330962 3 -   1826925 C---AC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8698 3 +     19643 T---AC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042359 3 -   6120653 T---AC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078602 3 +  43346337 C---AC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41612994 1 +  59628241 -----C
i Lycaon_pictus.CM007581.1                               I 11 C 0
s Macaca_arctoides.k141_1757516                              43279 3 -     61512 C---AC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370940 3 -  60120075 C---AC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23195 3 +     30207 C---AC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20298 3 -     24934 C---AC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23147 3 +     30527 C---AC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34336 3 -     50087 C---AC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44107 3 +     51645 C---AC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413276 3 - 187317192 C---AC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397499 3 +  25927173 C---AC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46663 3 -     62418 C---AC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23318 3 +     24253 C---AC
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43138 3 +     59329 C---AC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269066 3 +    668171 C---AC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20253 3 +     21031 C---AC
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  850 3 +     17132 C---AC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221581 3 -    270270 C---AC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320350 3 +  24302211 C---AC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355182 3 -    752769 C---AC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671866 1 -    737560 -----C
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                             219154 1 +    317179 -----C
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Marmota_marmota.CZRN01000018.1                           7499314 3 +  40650429 C---AC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148782 3 +    207569 C---AC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24336 1 -     74585 -----C
i Mellivora_capensis.MelCap_flattened_line_19308         I 12 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46970 3 -    140813 T---AC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427617 3 +  29670104 C---AC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8214 2 +     17804 T---G-
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               8998 2 -     12984 T---G-
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16949 2 -     26561 T---G-
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982945 3 +  93316391 C---AC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43340 3 +    145209 A---AT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                182998 3 +    200668 C---AC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960740 3 +  27267610 C---AC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361113 3 -   8254450 C---AC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40014 3 -     48117 C---AC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20377 3 -     27822 C---AC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6854 1 +     27589 -----T
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 12 C 0
s Mirza_zaza.k141_766280                                     50736 3 -     62432 C---AC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177152 3 +    366855 C---AC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16862 1 -     63510 -----C
i Mungos_mungo.MunMun_flattened_line_18455               I 5 C 0
s Murina_feae.MurFea_scaffold_17764                          37028 3 +     47283 C---AT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   5046 3 +      5579 T---AC
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685749 3 + 129401213 T---AC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39495067 3 + 130317789 T---AC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80864 3 -     86153 C---AC
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353488 1 +  14710649 -----C
i Mustela_putorius.JH418006.1                            I 12 C 0
s Myotis_brandtii.KE162005.1                               9791073 3 +  10118263 C---AT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385435 3 +   6019432 C---AT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381255 3 +   4330536 C---AT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3814 3 +      3929 C---AT
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117924 3 +    130748 C---AC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26956 3 +     34575 C---AC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467446 1 -  31847680 -----T
i Neomonachus_schauinslandi.NINY01007730.1               I 12 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125962 3 -    149072 C---AC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51697 3 -    132029 T---AC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7792 3 -     16345 T---AC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13677 3 +     22201 T---AC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411961 3 -  22158432 T---AC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24075 3 -     54323 T---AC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196596 1 +   9404916 -----C
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 11 C 0
s Nycticebus_bengalensis.LG01                             93634710 3 + 196305487 T---AC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1468 3 -      3937 T---AC
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562949 3 - 199412804 T---AC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549569 3 -   3988456 C---AC
i Ochotona_princeps.JH802162.1                           C 0 I 4
s Octodon_degus.JH651603.1                                11045828 1 -  11899542 -----G
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450042 1 +   2017862 -----T
i Odobenus_rosmarus.KB229312.1                           I 12 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91097 3 -    140218 C---AC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_2487                   105559 3 +    107918 C---AC
i Onychomys_torridus.OnyTor_scaffold_2487                I 10 n 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11708 3 -     14239 C---AC
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102037 3 - 174332312 C---AC
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 4
s Otocyon_megalotis.JAEUCK010005147.1                        37633 1 +    559221 -----C
i Otocyon_megalotis.JAEUCK010005147.1                    I 11 C 0
s Otolemur_crassicaudatus.k141_649260                        38092 3 -     51505 C---AC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351095 3 +   1103335 C---AC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1470790 3 - 189151597 C---AC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22790 1 -    230217 -----C
i Panthera_onca.PanOnc_flattened_line_3271               I 12 C 0
s Panthera_pardus.KV860321.1                              18460116 1 -  18783137 -----C
i Panthera_pardus.KV860321.1                             I 12 C 0
s Panthera_tigris.KE722367.1                               3970836 1 +   8748460 -----C
i Panthera_tigris.KE722367.1                             I 12 C 0
s Papio_anubis.CM001495.2                                   241190 3 - 183742232 C---AC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7654 3 +     21308 C---AC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288693 3 -  20919399 C---AC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20309 3 -     27687 C---AC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13445 3 +     16796 C---AC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20255 3 -     23640 C---AC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13428 1 +     78924 -----C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 12 C 0
s Perodicticus_ibeanus.k141_1921260                          24376 3 +     31479 T---AC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16735 3 -     24908 T---AC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37924 3 +     38305 C---AT
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245189 3 +  18517816 C---AC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30285 1 -     56120 -----C
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             472 3 +     55023 C---AC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             473 3 +     40849 C---AC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252221 3 +  14605196 C---AC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1207 3 +     22231 C---AT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63222 3 +    207309 T---AC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4316 3 -     25401 T---AC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30057 3 +     58159 T---AC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30333 3 +     63561 T---AC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30096 3 +     51148 T---AC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555063 3 -   4542175 T---AC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30080 3 +     51125 T---AC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6487 3 +     39866 C---AC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1572 3 -      9282 C---AC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40976 3 -     87950 C---AC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41369 3 -     88961 C---AC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6068 3 -     39403 C---AC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41020 3 +     87928 C---AC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6065 3 -     60166 C---AC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13001 3 -     67232 C---AC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40917 3 -     90634 C---AC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42385 3 +     89403 C---AC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175930 3 - 189387572 C---AC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190748 3 -   9816681 C---AC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25570 3 +     69807 C---AC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42765 3 -     80239 C---AC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980960 3 +   4620579 C---AC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564427 3 -   2598838 C---AC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2063 3 -      7103 C---AC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2660 3 -     11706 C---AC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6396 3 -     30655 C---AC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32721 3 +     46564 C---AC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92992 3 -     98465 C---AC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6629 3 +     35169 C---AC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34514 3 +     52041 T---AC
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3053 1 -     18639 -----C
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 12 C 0
s Pteropus_alecto.KB030862.1                               5839210 3 -  28871421 C---AC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535776 3 -   4952924 C---AC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097432 1 +  38429054 -----C
i Puma_concolor.QAVW01001104.1                           I 12 C 0
s Pygathrix_cinerea.k141_1153803                             24980 3 +     91421 C---AC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151473 3 -   7812017 C---AC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5850 3 +     72585 C---AC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020960 3 -  90668790 T---AC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913172 3 +   3329780 C---AC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26790 3 +     27361 C---AC
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120157 3 + 195417433 C---AC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234398 3 -   7961872 C---AC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73192 3 -    116970 C---AC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2141 2 +     27962 T---A-
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2148 2 +      6077 T---A-
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2184 2 +      5971 T---A-
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2238 2 +      5932 T---A-
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               421 2 -      4390 T---A-
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389489 2 - 209938924 T---A-
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2186 2 +      5979 T---A-
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2535 2 -      4301 T---A-
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236646 2 +   5703754 T---A-
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6236 2 +     21866 T---A-
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114371 3 +    313613 C---AC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 C 0
s Semnopithecus_entellus.k141_158471                         23297 3 +     27374 C---AC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26816 3 +     58920 C---AC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13312 3 -     45317 C---AC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20970 3 -     42441 C---AC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23650 3 -     29113 C---AC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26719 3 -     48123 C---AC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856694 3 -   1910179 C---CC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866672 3 +   3870691 C---AC
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4865 1 -     97271 -----C
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 12 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123269 1 +    196729 -----C
i Suricata_suricatta.SurSur_flattened_line_6629          I 5 C 0
s Symphalangus_syndactylus.tarseq_199                       389234 3 +   1523678 C---AC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12018 3 +     22964 C---AG
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1044 3 +      5583 C---AC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189949 6 +    199430 CACCAC
i Tapirus_indicus.TapInd_scaffold_7432                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103903 3 -    539355 C---AC
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 C 0
s Tarsius_lariang.k141_1780720                                5262 3 +      6850 T---AC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5303 3 +     20590 T---AC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351176 3 - 186847797 C---AC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22610 1 -     33621 -----C
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18176 3 -     31044 C---AG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478058 3 -    610378 C---AC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18861 3 +     26378 C---AC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31525 3 -     78344 C---AC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18182 3 +     25722 C---AC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26407 3 -     62838 C---AC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26524 3 +     46913 C---AC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7330 3 -     28527 C---AC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28346 3 -     64340 C---AC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26383 3 -     63452 C---AC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7826 3 +     22490 C---AC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1254 3 -      6147 C---AC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8228 3 -     13050 C---AC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253467 3 -   6242583 C---AC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59218 3 +     59866 C---AC
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832492 3 -   4065304 G---AC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6806 3 -     70247 G---AC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     576 3 -     21056 T---AC
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180204 1 +   5085361 -----C
i Ursus_maritimus.KK499267.1                             I 12 C 0
s Varecia_rubra.k141_787544                                  23605 3 -     30710 C---AC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22512 3 -    147434 C---AC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103355 1 -    112863 -----C
i Vulpes_lagopus.VulLag_flattened_line_12041             I 11 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172455 3 -    224448 C---AC
i Xerus_inauris.XerIna_scaffold_2302                     I 4 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27240 1 -     86975 -----T
i Zalophus_californianus.ZalCal_flattened_line_17732     I 12 C 0
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Zapus_hudsonius.ZapHud_scaffold_230229                      1705 1 +      2695 I
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    47053 0 +     77746 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Pteronotus_parnellii.KE847780.1                            50154 13 -     66298 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786 8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1237517 6 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     385093 0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    16330 6 -     61208 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3438 48 +     36723 CCTG----GAGGG-TCTAA-TTGCAAGCATAACCACCC-AACAGTTCTCTCCTT----------T
s Acinonyx_jubatus.LLWD01001279.1                           811170 21 +   1699592 TACG---ATTGGG-GCAAT-TAT-----------------------------TT----------T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18223 20 +     63021 CAAT----TTATA-GTAAT-TAA-----------------------------TT----------T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 201
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413699 21 +  29979442 TCCT---ATTGGG-GCAAT-TAA-----------------------------GT----------T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213807 21 +    347723 TACT---ATTGGG-GCAAT-TAA-----------------------------GG----------T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16336 18 -     61208 --AT----CAGTT-AGGGA-TAA-----------------------------GT----------T
i Allactaga_bullata.AllBul_scaffold_20030                I 6 I 12
s Allenopithecus_nigroviridis.k141_3755588                   45833 48 +     53615 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41772 48 +     44087 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14411 48 -     21945 CCTG----GAGGG-TCTAA-TTGCGGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16088 47 +     32033 CCTG-----AGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70534 48 -     84148 GCTG----CAGGA-TCTTA-GAGCAAGCTTAACCACCC-AGCAGTTCTCTCCTT----------T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42767 48 -     78289 GCTG----CAGGA-TCTTA-GAGCAAGCTTAACCACCC-AGCAGTTCTCTCCTT----------T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42213 48 +     55831 GCTG----CAGGA-TCTTA-GAGCAAGCTTAACCACCC-AATAGTTCTCTCCTC----------T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40654 48 -     64179 GCTG----CAGGA-TCTTA-GAGCAAGCTTAACCACCC-AGCAGTTCTCTCCTT----------T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22301 48 -     24835 GCTG----CAGGG-CCTTA-GAGCAAGCTTAACTACCC-AGCAGTTCTCTCCTT----------T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39284 48 +     45454 GCTG----CAGGG-CCTTA-GAGCAAGCTTAACCACCC-AGCAGTTCTCTCCTT----------T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              44982 48 +     70886 GCTG----CAGGA-TCTTA-GAGCAAGCTTAACCACCC-AGCAGTTCTCTCCTT----------T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7107 48 +     30854 GCTG----CAGGA-TCTTA-GAGCAAGCTTAACCACCC-AATAGTTCTCTCCTT----------T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31246 48 +     42133 GCTG----CAGGA-TCTTA-GAGCAAGCTTAACCACCC-AATAGTTCTCTCCTT----------T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175033 16 -    412891 --------CTGGA-GTGAT-GAA-----------------------------TT----------C
i Anoura_caudifer.AnoCau_scaffold_1412                   I 5 C 0
s Aotus_azarae.k141_118258                                   49056 48 -     65372 TCTG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGTTCTCTTCTT----------T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42803 48 +     43593 TCTG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGTTCTCTTCTT----------T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670816 48 +   5030052 TCTG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGTTCTCTTCTT----------T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22458 48 -     23494 TCTG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGTTCTCTTCTT----------T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7594 48 +      8415 TCTG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGTTCTCTTCTT----------T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14366 13 -     32367 CAAT----CTAGG-GTAA-----------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 15
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3315 24 -     15198 TTGTCCTACTGGA-GTGAT-GAA-----------------------------TT----------C
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273046 48 +  21539123 GCTG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGCTCTCTCCTT----------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9213 48 +     48076 GCTG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGCTCTCTCCTT----------T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4350 48 -     28759 GCTG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGCTCTCTTCTT----------T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31903 48 +     44353 GCTG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGCTCTCTCCTT----------T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47274 48 -     71267 GCTG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGCTCTCTCCTT----------T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21333 48 -     33135 GCTG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGCTCTCTCCTT----------T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4546 20 +     11645 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4552 20 -     19611 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6238 48 +     28062 TCTG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGTTCTCTCCTT----------T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41532 48 -     91139 TCTG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGTTCTCTCCTT----------T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19058 48 +     95584 TCTG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGTTCTCTCCTT----------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         18971 48 +    119600 TCTG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGTTCTCTCCTT----------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8444 48 +     18648 TCTG----TAGGG-TCTTA-GTGTGAGCTTCACCATCC-AGCAGTTCTTTCCTT----------C
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8105 48 -     13885 TCTG----CAGGG-TCTTA-GTGCCAGCTTCCCCATCC-AGCCATTCTTTGCCT----------T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16805 48 +     17162 TCTG----CAATG-TCTTA-GTGCGAGCTTCACCATCC-AGCAGTTCTTTCCTT----------C
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451760 48 + 189096842 TCTG----CAATG-TCTTA-GTGCGAGCTTCACCATCC-AGCAGTTCTTTCCTT----------C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              18053 48 -     18408 TCTG----CAATG-TCTTA-GTGCGAGCTTCACCATCC-AGCAGTTCTTTCCTT----------C
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503726 21 +  60362399 TACT---ACTGGG-GCAAT-TAA-----------------------------GT----------T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7362 21 -     23171 TACT---ACTGGG-GCAAT-TAA-----------------------------GT----------T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220705 21 +   9314153 TACT---ACTGGG-GCAAT-TAA-----------------------------GT----------T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613840 21 +  59632846 TACT---ACTGGG-GCAAT-TAA-----------------------------GT----------T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105421 21 -  63665305 TACT---ACTGGG-GCAAT-TAA-----------------------------GT----------T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268626 20 +    496798 cAAT----CTGGG-CCAAG-TAA-----------------------------TT----------T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3607 24 +      5315 TTGTCCTACTGGA-GTGAT-GAG-----------------------------TT----------C
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994297 20 +  23392119 TAAT----GTTTA-GTAGT-TCA-----------------------------TT----------T
i Cavia_aperea.AVPZ01000300.1                            C 0 I 14
s Cavia_porcellus.DS562891.1                               4997739 20 +  23407841 TAAT----GTTTA-GTAGT-TCA-----------------------------TT----------T
i Cavia_porcellus.DS562891.1                             C 0 I 14
s Cavia_tschudii.CavTsc_scaffold_23560                       60840 20 -     66877 TAAT----GTTTA-GTAGT-TCA-----------------------------TT----------T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 14
s Cebuella_niveiventris.k141_592277                           3337 39 -     12580 TCTG----TAGGG-TCTTA-GTGCGAGCTTCACCATCC-AGCAGTT-------------------
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41222 48 +     53515 TCTG----TAGGG-TCTTA-GTGCGAGCTTCACCATCC-AGCAGTTCTTTCCTT----------C
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369429 48 -  26074798 TCTG----CAGGG-TCTTA-GTGCAAGCTCAGCCACCC-AGCAGTTCTCTCCTC----------T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6318 48 -     34880 TCTG----CAGGG-TCTTA-GTGCAAGCTCAGCCACCC-AGCAGTTCTCTCCTC----------T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65413 48 -     89041 TCTG----CAGGG-TCTTA-GTGCAAGCTCAGCCACCC-AGCAGTTCTCTCCTC----------T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          550 20 -      5494 CCAT----CTGGG-CCAAG-TAA-----------------------------TT----------T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490502 20 -  27778364 TACT---ATTG-G-GCAAT-TCA-----------------------------TT----------T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17335 20 +     27315 TACT---ATTG-G-GCAAT-TCA-----------------------------TT----------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139012 48 -   4669795 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AGCAGTTCTCTCCTT----------T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42752 48 +     47900 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42585 48 -     44860 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42568 48 -    148725 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9825 48 -     17524 CCTG----GAGGG-TCTAA-TTGCAGGCTGAACCACCC-AACAGTTCTCTCCTT----------T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25547 48 -     34525 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30024 47 -     45857 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACA-TTCTCTCCTT----------T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23516 48 +     70610 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20441 48 +     36323 CCTG----GAGGG-TCTAA-TTGCAGGCTGAACCACCC-AACAGTTCTCTCCTT----------T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11156 19 -     19938 CAGC----CTGGG-GCAGT-TCA-----------------------------CT-----------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             28981 20 -     33796 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3497 20 -     15404 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7321 47 -     32913 TCTG----CAGGG-TCTTA-GCGCAAGCTGAGCCACGC-A-CAGTTCTCTCCGT----------T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17734 47 -     40346 TCTG----CAGGG-TCTTA-GCGCAAGCTGAGCCACGC-A-CAGTTCTCTCCGT----------T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             17989 47 +    216457 TCTG----CAGGG-TCTTA-GCGCAAGCTGAGCCACGC-A-CAGTTCTCTCCGT----------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17782 47 +     39636 TCTG----CAGGG-TCTTA-GCGCAAGCTGAGCCACGC-A-CAGTTCTCTCCGT----------T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2146 47 +      5346 C-TG----CAGGG-TCTTG-GTGCAAGCTTCATCATCC-AGCAGTTCTCTCCTG----------T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40878 37 -    112038 TCTG----CAGGG-TCTTA-G-----------CCACCC-AGCAGTTCTCTCCTT----------T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6450 37 +     34062 TCTG----CAGGG-TCTTA-G-----------CCACTC-AGCAGTTCTCTCCTT----------T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341338 48 +  18827391 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7883 48 -     44032 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302663 48 - 135778131 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTATCCTT----------T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10205 19 +     15858 CCAT----CTGGG-GCAAT-TAA-----------------------------TT-----------
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601781 19 -    839153 CCAT----CTGGG-GCAAT-TAA-----------------------------TT-----------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407100 47 -   2368649 CCTG----GAGGG-TCTAA--TGCAGGCTTAACCA-CCCAGCAGTTCTCTCCTT----------T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      376978 47 - 200372422 CCTG----GAGGG-TCTAA--TGCAGGCTTAACCA-CCCAGCAGTTCTCTCCTT----------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                525 47 -     84244 CCTG----GAGGG-TCTAA--TGCAGGCTTAACCA-CCCAGCAGTTCTCTCCTT----------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805583 17 +  53390261 T-C---TAG---T-GAAAT-CAG-----------------------------TT----------T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1090 24 -      8242 TACTCCAACTGGG-GCAAT-TAA-----------------------------TA----------T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40605 16 -     83289 CAAC----TTATG-A-----TAA-----------------------------TT----------T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 12
s Cricetulus_griseus.LT883664.1                          213113067 20 - 224834208 CAAG----TTATG-GCAGT-TGA-----------------------------TT----------C
i Cricetulus_griseus.LT883664.1                          C 0 I 12
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2630 21 +     87169 TACT---AATGGG-GCAAT-TAA-----------------------------TT----------T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643107 20 -   1526836 CAAC----CTATA-GTAAT-TAA-----------------------------GT----------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3323 20 +     50838 TAAC----AATTA-GCTGT-TCA-----------------------------TT----------T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 12
s Cuniculus_paca.CunPac_flattened_line_7025                   2188 20 +     36344 TAAT----GCTTA-GTAAT-TCA-----------------------------TT----------T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 12
s Dasypus_novemcinctus.JH564415.1                          2108493 19 -   2246927 CAGC----CTGGG-GTGAT-TAA-----------------------------GC-----------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290917 20 +  12879189 CAGT----CTGGG-ACAA-CTCG-----------------------------TT----------T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863057 24 -  20541912 TCGTCCTGCTGGA-GCGGT-TAA-----------------------------TT----------C
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662794 20 -   1390856 TACT---ACTG-G-GCAAT-TCA-----------------------------TT----------T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137579 20 -    198055 TACT---GCTG-G-GCAAT-TCA-----------------------------TT----------T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96798 20 -    115145 TGAC----GATTA-GTAGT-TCA-----------------------------TT----------T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 12
s Dipodomys_ordii.KN672350.1                              18948683 20 -  37912305 CAAT----CGAGG-GCAAA-TGA-----------------------------TT----------T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3630 20 -     10735 CAAT----CGAGG-GCAAA-TGA-----------------------------TT----------T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8240 20 +     14636 TAAC----GTTTA-GAAGT-TCA-----------------------------CT----------T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 14
s Echinops_telfairi.JH980293.1                            62852248 19 - 111700974 CAAC----CTGG--GCGAT-TAA-----------------------------TT----------T
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4620 24 +     19438 TATTCCTCTTGGG-Gcaat-taa-----------------------------tt----------t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         7814870 18 -  10337057 -AAC----CTGG--GTGAT-TAA-----------------------------TT----------T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29348 20 +    110024 TAAT----TTATG-TTGGA-TAA-----------------------------TT----------T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11316 20 +     18970 TAAT----TTATG-GTGGA-TAA-----------------------------TT----------T
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 12
s Enhydra_lutris.KZ291758.1                               24914463 21 +  41312741 TAGT---ATTGGG-GTAAT-TAA-----------------------------GG----------T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576687 24 +  14770903 TTCTCCTACTGGA-ACAAT-TAA-----------------------------TT----------T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039782 21 -   4378816 TACA---ACTGGG-GCAAT-TAA-----------------------------TT----------T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373716 21 +  39960074 TACA---ACTGGG-GCAAT-TAA-----------------------------TT----------T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410502 21 -    498745 TACA---ACTGGG-GCAAT-TAA-----------------------------TT----------T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260861 48 +  21539334 CCAG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13089 20 -     24895 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40798 20 -     70999 CAAT----CTGGG-ACAA-TTAT-----------------------------TT----------T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84760 20 +    112731 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41333 20 +     68309 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51655 20 -     65740 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22288 20 -     75513 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46481 20 -     97555 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3208 20 +     30972 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40928 20 -     52037 CAAT----CTGGG-ACAA-TTAT-----------------------------TT----------T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57332 20 -    111500 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245082 21 - 206538554 TACT---ATTGGG-ACAGT-TAT-----------------------------TT----------T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114868 21 - 205367284 TACT---ATTGGG-ACAGT-TAT-----------------------------TT----------T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25970 21 -     30238 TACT---ATTGGG-GCAAT-TAT-----------------------------TT----------T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122942 14 -    137831 CAGT----CTGGG-ACGAT----------------------------------------------
i Galago_moholi.ctg3793                                  C 0 I 2
s Galago_senegalensis.k141_991736                             6487 14 +     22493 CAGT----CTGGG-ATGAT----------------------------------------------
i Galago_senegalensis.k141_991736                        C 0 I 2
s Galagoides_demidoff.k141_561628                            18539 14 -     32986 CAGT----CTGGG-ACAAT----------------------------------------------
i Galagoides_demidoff.k141_561628                        C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_74466               17402 20 +     18121 CAAT----CTGGG-ACAAT-TAA-----------------------------TT----------T
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32265 20 -     36801 CAAT----CTAGG-GTAAT-TAA-----------------------------TT----------G
i Glis_glis.GliGli_scaffold_33859                        C 0 I 12
s Gorilla_beringei.k141_3358147                               3777 48 -      8343 CCTG----GAGGG-TCTAA-TTGCAAGCATAACCACTC-AACAGTTCTCTCCTT----------T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252788 48 - 186649187 CCTG----GAGGG-TCTAA-TTGCAAGCATAACCACCC-AACAGTTCTCTCCTT----------T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11580 21 +     11903 CAAT----CTAGG-GTAATTTAA-----------------------------TT----------G
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 I 12
s Hapalemur_alaotrensis.k141_330369                          13016 20 -     40692 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34417 20 +     49394 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59286 20 -     66874 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8159 20 -     42923 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15159 20 -     53142 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29110 21 -    327341 TACC---ATTGGG-GCAAT-TAA-----------------------------TT----------T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925382 20 -  22651954 TAAC----ATTTA-GTAgg-taa-----------------------------tt----------t
i Heterocephalus_glaber.JH602082.1                       C 0 I 12
s Hipposideros_galeritus.HipGal_scaffold_23202               49163 24 +     49977 TACTCCTTCTGGG-GCAAT-TAA-----------------------------TA----------C
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140776 48 -    630532 CCTG----GAGGG-TCTAA-TTGCAAAAATAAGCACCC-AACAGTTCTCTCCTT----------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67786 21 +     83186 TACT---ATTGGG-GCAAT-TAA-----------------------------TT----------T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69675 20 +    143317 TAAT----GCATA-GTAGT-TCA-----------------------------TT----------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3811 48 +     12352 CCTG----GAGGG-TCTAA-CTGCAAAAATAAGCACCC-AACAGTTCTCTCCCT----------T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              10994 48 +     55766 CCTG----GAGGG-TCTAA-TTGCAAAAATAAGCACCC-AACAGTTCTCTCCCT----------T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050590 48 + 191637585 CCTG----GAGGG-TCTAA-TTGCAAAAATAAGTACCC-AACAGTTCTCTCCTT----------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799468 48 +  11177569 CCTG----GAGGG-TCTAA-TTGCAAAAATAAGTACCC-AACAGTTCTCTCCTT----------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385093 19 +   7955117 -AAT----CTAGG-GTAAT-TAA-----------------------------TT----------T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 11
s Indri_indri.k141_2415743                                     669 20 +     11955 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237523 18 +   9596543 --AT----CAGTT-AGGGG-TAG-----------------------------TT----------T
i Jaculus_jaculus.JH725527.1                             I 6 I 12
s Lagothrix_lagothricha.k141_246028                          41588 48 +    110728 GCCG----CAGGG-TCTTA-GTGCAAGCTTAACCACCC-AGCAGTTCTCTCCTT----------T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60162 24 -     65777 TTCTCCTACTGGA-ACAAT-TAA-----------------------------TT----------T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757807 20 +  30322482 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2253 48 -     13097 TCTG----CAGGG-TCTTA-GTGCAAGCTTCACCATCC-AGCAGTTCTCTCCTT----------T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2204 48 +      5940 TCTG----CAGGG-TCTTA-GTGCAAGCTTCACCATCC-AGCAGTTCTCTCCTT----------T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        1838 48 -      5717 TCTG----CAGGG-TCTTA-GTGCAAGCTTCACCATCC-AGCAGTTCTCTCCTT----------T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8454 48 -     11567 TCTG----CAGGG-TCTTA-GTGCAAGCTTCACCATCC-AGCAGCTCTTTCCTT----------T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9835 48 -     12945 TCTG----CAGGG-TCTTA-GTGCAAGCTTCACCATCC-AGCAGCTCTTTCCTT----------T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7338 20 +     29618 CAAT----CTGGG-ACAA-CTAA-----------------------------TT----------T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7335 20 +     31569 CAAT----CTGGG-ACAA-CTAA-----------------------------TT----------T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7346 20 +     24756 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7344 20 +     16388 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811844 21 -   3914936 TACT---ATTGGG-GCAAA-TAA-----------------------------GT----------T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16191 20 +     24238 ---------------TGAC-TAA-----------------------------GTGAGAAATTAGT
i Lepus_americanus.LepAme_scaffold_56121                 I 4 I 1
s Lophocebus_aterrimus.ctg367                               330965 48 -   1826925 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8701 14 +     19643 CAAT----CTGGG-ACAAT----------------------------------------------
i Loris_lydekkerianus.k141_2031736                       C 0 I 2
s Loris_tardigradus.ctg83                                  5042362 14 -   6120653 CAAT----CTGGG-ACAAT----------------------------------------------
i Loris_tardigradus.ctg83                                C 0 I 2
s Loxodonta_africana.GL010049.1                           39078605 19 +  43346337 CGAC----CTGG--GTAAT-TTA-----------------------------TT----------T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41612995 21 +  59628241 TACT---ACTGGG-GCAAT-TAA-----------------------------GT----------T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43282 48 -     61512 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370943 48 -  60120075 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23198 48 +     30207 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20301 48 -     24934 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23150 48 +     30527 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34339 48 -     50087 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44110 48 +     51645 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413279 48 - 187317192 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397502 48 +  25927173 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46666 48 -     62418 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23321 48 +     24253 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43141 48 +     59329 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269069 48 +    668171 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20256 48 +     21031 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  853 48 +     17132 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221584 24 -    270270 TATTCCTACTGGG-GCAAT-TAA-----------------------------TT----------T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320353 48 +  24302211 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355185 48 -    752769 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671867 20 -    737560 TACT---ACTG-G-gcaat-taa-----------------------------tt----------t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219155 20 +    317179 TACT---ACTG-G-GCAAT-AAA-----------------------------TT----------T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499317 20 +  40650429 CAAT----TTAGG-GTAAT-TAA-----------------------------TT----------T
i Marmota_marmota.CZRN01000018.1                         C 0 I 11
s Megaderma_lyra.MegLyr_scaffold_4542                       148785 24 +    207569 TACTCCTACTGGG-GCAAT-TAA-----------------------------TT----------T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24337 21 -     74585 TACT---ATTGGG-GTAAT-TAA-----------------------------GG----------T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 46973 20 -    140813 CAAT----TGATG-GTAAT-TAA-----------------------------TT----------T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 12
s Mesocricetus_auratus.KB708134.1                         17427620 20 +  29670104 CAAC----TTATG-GCAGG-TCA-----------------------------TT----------T
i Mesocricetus_auratus.KB708134.1                        C 0 I 12
s Mico_argentatus.k141_582562                                 8216 48 +     17804 TCTG----TAGGG-TCTTA-GTGCGAGCTTCACCATCC-AGCAGTTCTTTCCTT----------C
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9000 48 -     12984 TCTG----TAGGG-TCTTA-GTGCGAGCTTCACCATCC-AGCAGTTCTTTCCTT----------C
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16951 48 -     26561 TCTG----TAGGG-TCTTA-GTGCGAGCTTCACCATCC-AGCAGTTCTGTCCTT----------C
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982948 20 +  93316391 CAAT----CTGGG-acaa-ttaa-----------------------------tt----------t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43343 19 +    145209 CAAA----CTGG--GTGAT-TAA-----------------------------TT----------T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183001 24 +    200668 TTGTCCTGCTGGA-GCGAT-TAA-----------------------------TT----------C
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960743 20 +  27267610 CAAT----TTATG-GTGGT-TAA-----------------------------TT----------T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361116 24 -   8254450 TCCTCCTGTGGGA-GCAAT-AAG-----------------------------TT----------T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40017 24 -     48117 TCCTCCTGTGGGA-GCAAT-AAG-----------------------------TT----------T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20380 47 -     27822 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6855 21 +     27589 TACT---ATTGGG-GCAAA-TAA-----------------------------GT----------T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50739 20 -     62432 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177155 24 +    366855 TTCTCCTATCGGA-ATGGT-TAA-----------------------------TT----------T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16863 21 -     63510 TACC---ATTGAG-ACAAT-TAA-----------------------------TT----------T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37031 24 +     47283 TTCTCCTACTGGA-ACAAT-TAA-----------------------------TT----------T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   5049 20 +      5579 CAAT----TTatg-ataaa-taa-----------------------------tt----------t
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685752 20 + 129401213 CAAT----TTATG-ATAAT-TAA-----------------------------TT----------T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39495070 20 + 130317789 CAAT----TTATG-ataat-taa-----------------------------tt----------t
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80867  6 -     86153 CAAT----TT-------------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 11
s Mustela_putorius.JH418006.1                             14353489 21 +  14710649 TAAT---ATTGGG-GTAAT-TAA-----------------------------GG----------T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791076 24 +  10118263 TTCTCCTACTGGA-ACACT-TAA-----------------------------TT----------T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385438 24 +   6019432 TTCTCCTACTGga-ataat-taa-----------------------------tt----------t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381258 24 +   4330536 TTCTCCTACTGGA-ACACT-TAA-----------------------------TT----------T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3817 24 +      3929 TTCTCCTACTGGA-ACAAT-TAA-----------------------------TT----------T
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117927 19 +    130748 CAGC----CTGGG-CCAAC-TGA-----------------------------TA-----------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              26959 47 +     34575 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467447 21 -  31847680 TACT---ATTGGG-GCAAA-TAA-----------------------------GT----------T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125965 24 -    149072 TTCTCCTACTAGG-GTAAT-TCA-----------------------------TT----------T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51700 48 -    132029 CCTG----GATGG-TCTAA-TTGCAAAAATAAGCACCC-AACAGTTCTCTCCTT----------T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7795 48 -     16345 CCTG----GATGG-TCTAA-TTGCAAAAATAAGCACCC-AACAGTTCTCTCCTT----------T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13680 48 +     22201 CCTG----GATGG-TCTAA-TTGCAAAAATAAGCACCC-AACAGTTCTCTCCTT----------T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8411964 48 -  22158432 CCTG----GATGG-TCTAA-TTGCAAAAATAAGCACCC-AACAGTTCTCTCCTT----------T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24078 48 -     54323 CCTG----GATGG-TCTAA-TTGCAAAAATAAGCACCC-AACAGTTCTCTCCTT----------T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196597 21 +   9404916 TACT---ACTGGG-GCAAT-TAG-----------------------------GT----------T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634713 14 + 196305487 CAAT----CTGGG-ACAAT----------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 I 2
s Nycticebus_coucang.k141_3846325                             1471 14 -      3937 CAAT----CTGGG-ACAAT----------------------------------------------
i Nycticebus_coucang.k141_3846325                        C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562952 14 - 199412804 CAAT----CTGGG-ATAAT----------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 2
s Ochotona_princeps.JH802162.1                             2549576 10 -   3988456 ---------------tgat-aaa-----------------------------tt----------t
i Ochotona_princeps.JH802162.1                           I 4 I 1
s Octodon_degus.JH651603.1                                11045829 20 -  11899542 TAAC----AATTA-GCTGT-TTG-----------------------------TT----------T
i Octodon_degus.JH651603.1                               C 0 I 12
s Odobenus_rosmarus.KB229312.1                             1450043 21 +   2017862 TACT---ATTGGG-GCAAA-TAA-----------------------------GT----------T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91100 20 -    140218 TGAT----TTATG-GTAGT-TAA-----------------------------TT----------T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1477 17 -     41509 ---t----ttgag-ggaaT-TAA-----------------------------TT----------T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 12
s Orycteropus_afer.OryAfe_flattened_line_171931              11711 19 -     14239 CAGC----CTAG--GTAAT-TAA-----------------------------TT----------T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102044 20 - 174332312 ---------------TGAC-TAA-----------------------------TTGAGAAATTAGT
i Oryctolagus_cuniculus.CM000791.1                       I 4 I 1
s Otocyon_megalotis.JAEUCK010005147.1                        37634 21 +    559221 TACT---ACTGGG-GCAAT-TGA-----------------------------GT----------T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38095 14 -     51505 CAGT----CTGGG-ACAAT----------------------------------------------
i Otolemur_crassicaudatus.k141_649260                    C 0 I 2
s Otolemur_garnettii.GL873799.1                             351098 14 +   1103335 CAGT----CTGGG-ACAAT----------------------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 I 2
s Pan_troglodytes.CM009242.2                               1470793 48 - 189151597 CCTG----GAGGG-TCTAA-TTGCAAGCATAACCACCC-AACAGTTCTCTCCTT----------T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22791 21 -    230217 TACT---ATTGGG-GCAAT-TAT-----------------------------TT----------T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460117 21 -  18783137 TACT---ATTGGG-GCAAT-TAT-----------------------------TT----------T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970837 21 +   8748460 TACT---ATTGGG-GCAAT-TAT-----------------------------TT----------T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241193 48 - 183742232 CCTG----GAAGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7657 48 +     21308 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288696 48 -  20919399 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20312 48 -     27687 CCTA----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13448 48 +     16796 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20258 48 -     23640 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13429 21 +     78924 TACT---ATTGGG-GCAAT-TAT-----------------------------TT----------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24379 14 +     31479 TAAT----CTGGG-ACAAT----------------------------------------------
i Perodicticus_ibeanus.k141_1921260                      C 0 I 2
s Perodicticus_potto.k141_1854441                            16738 14 -     24908 TAAT----CTGGG-ACAAT----------------------------------------------
i Perodicticus_potto.k141_1854441                        C 0 I 2
s Perognathus_longimembris.PerPac_flattened_line_28053       37927 20 +     38305 CAAT----CCAGA-GTAAA-TAA-----------------------------TG----------T
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245192 20 +  18517816 CAAC----TTATG-GCAAT-TGA-----------------------------TT----------T
i Peromyscus_maniculatus.KI615324.1                      C 0 I 12
s Petromus_typicus.PetTyp_scaffold_17301                     30286 20 -     56120 TAAC----ATTTA-GTATT-TAA-----------------------------TT----------T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 12
s Piliocolobus_badius.k141_2704958                             475 47 +     55023 GCTG----GAGGG-TCTAA-CTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------C
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             476 47 +     40849 GCTG----GAGGG-TCTAA-CTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------C
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252224 47 +  14605196 GCTG----GAGGG-TCTAA-CTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1210 24 +     22231 TTCTCCTACTGGA-CCAAT-TAA-----------------------------TT----------T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63225 48 +    207309 CCTG----CAGGG-TCTCA-GCGCAAGCTTCACCACCC-AGCAGTTCTCTCCTT----------T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4319 48 -     25401 CCTG----CAGGG-TCTCA-GCGCAAGCTTCACCACCC-AGCAGTTCTCTCCTT----------T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30060 48 +     58159 CCTG----CAGGG-TCTCA-GCGCAAGCTTCACCACCC-AGCAGTTCTCTCCTT----------T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30336 48 +     63561 CCTG----CAGGG-TCTCA-GCGCAAGCTTCACCACCC-AGCAGTTCTCTCCTT----------T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30099 48 +     51148 CCTG----CAGGG-TCTCA-GCGCAAGCTTCACCACCC-AGCAGTTCTCTCCTT----------T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555066 48 -   4542175 CCTG----CAGGG-TCTCA-GCGCAAGCTTCACCACCC-AGCAGTTCTCTCCTT----------T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30083 48 +     51125 CCTG----CAGGG-TCTCA-GCGCAAGCTTCACCACCC-AGCAGTTCTCTCCTT----------T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6490 47 +     39866 TCTG----CAGGG-TCTTA-GCACAGGCTGAGCCACCC-A-CAGTTCTCTCCGT----------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1575 47 -      9282 TCTG----CAGGG-TCTTA-GCACAGGCTGAGCCACCC-A-CAGTTCTCTCCGT----------T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       40979 47 -     87950 TCTG----CAGGG-TCTTA-GCACAGGCTGAGCCACCC-A-CAGTTCTCTCCGT----------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41372 47 -     88961 TCTG----CAGGG-TCTTA-GCACAGGCTGAGCCACCC-A-CAGTTCTCTCCGT----------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6071 47 -     39403 TCTG----CAGGG-TCTTA-GCACAGGCTGAGCCACCC-A-CAGTTCTCTCCGT----------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41023 47 +     87928 TCTG----CAGGG-TCTTA-GCACAGGCTGAGCCACCC-A-CAGTTCTCTCCGT----------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6068 47 -     60166 TCTG----CAGGG-TCTTA-GCACAGGCTGAGCCACCC-A-CAGTTCTCTCCGT----------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13004 47 -     67232 TCTG----CAGGG-TCTTA-GCACAGGCTGAGCCACCC-A-CAGTTCTCTCCGT----------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40920 47 -     90634 TCTG----CAGGA-TCTTA-GCACAGGCTGAGCCACCC-A-CAGTTCTCTCCGT----------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42388 47 +     89403 TCTG----CAGGG-TCTTA-GCACAGGCTGAGCCACCC-A-CAGTTCTCTCCGT----------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175933 36 - 189387572 CCTG----GAGGG-C-------------ATAACCACCC-AACAGTTCTCTCCTT----------T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190751 36 -   9816681 CCTG----GAGGG-C-------------ATAACCACCC-AACAGTTCTCTCTTT----------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25573 47 +     69807 GCTG----GAGGG-TCTAA-TCGCAGGCTTAACCA-CC-AACAGTTGTCTCCTT----------T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42768 47 -     80239 GCTG----GAGGG-TCTAA-TCGCAGGCTTAACCA-CC-AACAGTTGTCTCCTT----------T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980963 20 +   4620579 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564430 20 -   2598838 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2066 20 -      7103 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2663 20 -     11706 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6399 20 -     30655 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32724 20 +     46564 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       92995 20 -     98465 CAAT----CCGGG-ACAA-TTAA-----------------------------TT----------T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6632 20 +     35169 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34517 20 +     52041 CAAT----TGATg-gtaat-taa-----------------------------tt----------t
i Psammomys_obesus.NESX01036366.1                        C 0 I 12
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3054 21 -     18639 TACT---ATTGGG-GTAAT-TAA-----------------------------GG----------T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839213 24 -  28871421 TATTCCTACTGGG-GCAAT-TAA-----------------------------TT----------T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535779 24 -   4952924 TATTCCTACTGGg-gcaat-taa-----------------------------tt----------t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097433 21 +  38429054 TACG---ATTGGG-GCAAT-TAT-----------------------------TT----------T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             24983 47 +     91421 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151476 47 -   7812017 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5853 47 +     72585 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020963 20 -  90668790 CAAT----TTATG-ATAGT-CAA-----------------------------TT----------T
i Rattus_norvegicus.chr16                                C 0 I 12
s Rhinolophus_sinicus.LVEH01000134.1                       2913175 24 +   3329780 TACTCCCACTGGG-Acaat-aaa-----------------------------tt----------t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26793 47 +     27361 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120160 47 + 195417433 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234401 47 -   7961872 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73195 24 -    116970 TATTCCTAGTGGG-GCAAT-TAA-----------------------------TT----------T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2143 48 +     27962 CCTG----CAGGG-TCTTG-GTGCAAGCTTCATCATCC-AGCAGTTCTCTCCTG----------T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2150 48 +      6077 CCTG----CAGGG-TCTTG-GTGCAAGCTTCACCACCC-AGCAGTTCTCTCCTG----------T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2186 48 +      5971 CCTG----CTGGG-TCTTG-GTGCAAGCTTCACCATCC-AGCAGTTCTCTCCTG----------T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2240 48 +      5932 CCTG----CTGGG-TCTTG-GTGCAAGCTTCACCATCC-AGCAGTTCTCTCCTG----------T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               423 48 -      4390 CCTG----CTGGG-TCTTG-GTGCAAACTTCACCATCC-AGCAGTTCTCTCCTG----------T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389491 48 - 209938924 CCTG----CAGGG-TCTTG-GTGCAAGCGTCATCATCC-AGCAGTTCTCTCCTG----------C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2188 48 +      5979 CCTG----CTGGG-TCTTG-GTGCAAGCTTCACCATCC-AGCAGTTCTCTCCTG----------T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2537 48 -      4301 CCTG----CAGGG-TCTTG-GTGCAAGCTTCACCACCC-AGCAGTTCTCTCCTG----------T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236648 48 +   5703754 TCTG----CAGGG-TCTTA-GAGCAAGCTCAGCCACCC-AGCAGTTCTCTCCTC----------T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6238 48 +     21866 TCTG----CAGGG-TCTTA-GAGCAAGCTCAGCCACCC-AGCAGTTCTCTCCTC----------T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114374 18 +    313613 TAC---TAG---T-GAAAT-TAA-----------------------------TT----------T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23300 47 +     27374 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26819 47 +     58920 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13315 47 -     45317 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            20973 47 -     42441 GCTG----GAGGG-TCTAA-TTGCAGGCGTAACCA-CC-AACAGTTCTCTCCTT----------T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23653 47 -     29113 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26722 47 -     48123 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47053 11 +     77746 ---------TATG-G-----TAA-----------------------------TT----------G
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 12
s Solenodon_paradoxus.SolPar_flattened_line_126            1856697 23 -   1910179 -CCTACTACCCGG-GCTGT-TAA-----------------------------CT----------T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866675 20 +   3870691 CAAT----CTAGG-GTAAT-TAA-----------------------------TT----------T
i Spermophilus_dauricus.KZ294078.1                       C 0 I 11
s Spilogale_gracilis.SpiGra_flattened_line_13525              4866 21 -     97271 TACT---ACTGGG-GCAAT-TAA-----------------------------GG----------T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123270 21 +    196729 TACC---ATTGGG-GCAAT-TAA-----------------------------TT----------T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389237 48 +   1523678 CCTG----GAAGG-TCTAT-TTGCAAAAATAAGCACCC-AACAGTTCTCTCCTT----------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12021 21 +     22964 TT--C-TGCTGGA-GCAAT-TAG-----------------------------GT----------T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1047 19 +      5583 CAGC----CTGGG-CCAAC-TGA-----------------------------TA-----------
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189955 21 +    199430 TACT---ACTG-GGGAAGT-TAA-----------------------------TT----------T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103906 21 -    539355 TACT---ACTG-GGGCAGT-TAA-----------------------------TT----------T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5265 20 +      6850 CCAT----CTGGG-TCAAG-TAA-----------------------------TT----------T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5306 20 +     20590 CCAT----CTGGG-TCAAG-TAA-----------------------------TT----------T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351179 48 - 186847797 CCTG----GAGGG-TCTAA-TTGCAGGCTTAACCACCC-AACAGTTCTCTCCTT----------T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22611 20 -     33621 TATC----ATTTA-GTAGT-TAA-----------------------------TT----------T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 12
s Tolypeutes_matacus.TolMat_scaffold_31955                   18179 19 -     31044 CAGC----CTGGG-GCAAT-GGC-----------------------------TA-----------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478061 24 -    610378 TTCTCCTACTGGA-GCGAT-TAA-----------------------------CT----------C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18864 47 +     26378 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31528 47 -     78344 GCTG----GAGGA-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18185 47 +     25722 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26410 47 -     62838 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26527 47 +     46913 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7333 47 -     28527 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28349 47 -     64340 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26386 47 -     63452 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7829 47 +     22490 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1257 47 -      6147 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8231 47 -     13050 GCTG----GAGGA-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253470 47 -   6242583 GCTG----GAGGA-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59221 47 +     59866 GCTG----GAGGG-TCTAA-TTGCAGGCTTAACCA-CC-AACAGTTCTCTCCTT----------T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832495 13 -   4065304 CAGT----GTGGG-ACAA-----------------------------------------------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6809 13 -     70247 CAGT----GTGGG-ACAA-----------------------------------------------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     579 21 -     21056 TACTTCTAG---T-GAAAT-TAA-----------------------------TT----------T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180205 21 +   5085361 TCCT---ATTGGG-GCAAT-TAA-----------------------------GT----------T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23608 20 -     30710 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22515 20 -    147434 CAAT----CTGGG-ACAA-TTAA-----------------------------TT----------T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103356 21 -    112863 TACT---ACTGGG-GCAAT-TAA-----------------------------GT----------T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172458 20 -    224448 CAAC----TTAGG-GTAAT-TAA-----------------------------TT----------G
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 12
s Zalophus_californianus.ZalCal_flattened_line_17732         27241 21 -     86975 TACT---ATTGGG-GCAAA-TAA-----------------------------GT----------T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1706 18 +      2695 --AC----CTGTT-AAAGG-TTA-----------------------------TT----------T
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 1 I 12
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Pteronotus_parnellii.KE847780.1                            50154 13 -     66298 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786  8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3486 15 +     36723 A--GTTT-AGAGCCCTG-------------T
s Acinonyx_jubatus.LLWD01001279.1                           811191 15 +   1699592 T--GCTT-AGAACTCTG-------------T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18444  3 +     63021 ---------------TA-------------T
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 201 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413720 15 +  29979442 T--GCTG-GGAATCCTG-------------T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213828 15 +    347723 T--GCTT-AGAACCCTA-------------T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16366  3 -     61208 ---------------TG-------------T
i Allactaga_bullata.AllBul_scaffold_20030                I 12 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45881 15 +     53615 A--GTTT-AGAGCCCTG-------------T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41820 15 +     44087 A--GTTT-AGAGCCCTG-------------T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14459 14 -     21945 A--GTTT-AGAGCC-TG-------------T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16135 15 +     32033 A--GTTT-AGAGCCCTG-------------T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70582 15 -     84148 A--GTTT-AGAGCCCTG-------------T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42815 15 -     78289 A--GTTT-AGAGCCCTG-------------T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42261 15 +     55831 A--GTTT-AGAGCCCTG-------------T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40702 15 -     64179 A--GTTT-AGAGCCCTG-------------T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22349 15 -     24835 A--GTTT-AGAGCCCTG-------------T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39332 15 +     45454 A--GTTT-AGAGCCCTG-------------T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45030 15 +     70886 A--GTTT-AGAGCCCTG-------------T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7155 15 +     30854 A--GTTT-AGAGCCCTG-------------T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31294 15 +     42133 A--GTTT-AGAGCCCTG-------------T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175049 15 -    412891 T--GTTC-AGAGCCCTG-------------T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49104 15 -     65372 A--GTTT-AGAGCTCTG-------------T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42851 15 +     43593 A--GTTT-AGAGCTCTG-------------T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670864 15 +   5030052 A--GTTT-AGAGCTCTG-------------T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22506 15 -     23494 A--GTTT-AGAGCTCTG-------------T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7642 15 +      8415 A--GTTT-AGAGCTCTG-------------T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14394  3 -     32367 ---------------TG-------------T
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 15 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3339 15 -     15198 T--GTTC-AGAACCCTG-------------T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273094 15 +  21539123 A--GTTT-AGTGCCCTG-------------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9261 15 +     48076 A--GTTT-AGTGCCCTG-------------T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4398 15 -     28759 A--GTTT-AGAGCCCTG-------------T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31951 15 +     44353 A--GTTT-AGTGCCCTG-------------T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47322 15 -     71267 A--GTTT-AGTGCCCTG-------------T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21381 15 -     33135 A--GTTT-AGTGCCCTG-------------T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4566 15 +     11645 T--GTTT-AGCACGCTG-------------T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4572 15 -     19611 T--GTTT-AGCACTCTG-------------T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6286 15 +     28062 A--GTTT-AGAGCCCCG-------------T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41580 15 -     91139 A--GTTT-AGAGCCCCA-------------T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19106 15 +     95584 A--GTTT-AGAGCCCCG-------------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19019 15 +    119600 A--GTTT-AGAGCCCCG-------------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8492 15 +     18648 A--GTTT-ACAGCCCTG-------------T
i Callibella_humilis.k141_1233062                        C 0 I 83
s Callimico_goeldii.k141_1609886                              8153 15 -     13885 A--GTTT-ACAGCCCTG-------------T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16853 15 +     17162 A--GTTT-ACAGCCCTA-------------t
i Callithrix_geoffroyi.k119_473390                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165451808 15 + 189096842 A--GTTT-ACAGCCCTA-------------t
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_404482                              18101 15 -     18408 A--GTTT-ACAGCCCTA-------------t
i Callithrix_kuhlii.k119_404482                          C 0 C 0
s CanFam4.chr16                                           42503747 15 +  60362399 T--GCTT-AGAACGTTG-------------T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7383 15 -     23171 T--GCTT-AGAACGTTG-------------T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220726 15 +   9314153 T--GCTT-AGAACGTTG-------------T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613861 15 +  59632846 T--GCTT-AGAACGTTG-------------T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105442 15 -  63665305 T--GCTT-AGAACGTTG-------------T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268646 15 +    496798 T--GTTC-AAAACCCTG-------------C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3631 15 +      5315 T--GTTC-AGAACCCTG-------------T
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994331  3 +  23392119 ---------------TG-------------G
i Cavia_aperea.AVPZ01000300.1                            I 14 C 0
s Cavia_porcellus.DS562891.1                               4997773  3 +  23407841 ---------------TG-------------G
i Cavia_porcellus.DS562891.1                             I 14 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60874  3 -     66877 ---------------TG-------------G
i Cavia_tschudii.CavTsc_scaffold_23560                   I 14 C 0
s Cebuella_niveiventris.k141_592277                           3376 11 -     12580 ------T-ACAGCCCTG-------------T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41270 15 +     53515 A--GTTT-ACAGCCCTG-------------T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369477 15 -  26074798 A--GTTT-AGAGCCCTG-------------T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6366 15 -     34880 A--GTTT-AGAGCCCTG-------------T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65461 15 -     89041 A--GTTT-AGAGCCCTG-------------T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          570 15 -      5494 T--GTTC-AGAACCCTG-------------C
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490522 15 -  27778364 T--GTTT-AGAACCCTG-------------T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17355 15 +     27315 T--GTTT-AGAACCCTG-------------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139060 15 -   4669795 A--GTTT-AGAGCCCTG-------------T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42800 15 +     47900 A--GTTT-AGAGCCCTG-------------T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42633 15 -     44860 A--GTTT-AGAGCCCTG-------------T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42616 15 -    148725 A--GTTT-AGAGCCCTG-------------T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9873 15 -     17524 A--GTTT-AGAGCCCTG-------------T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25595 15 -     34525 A--GTTT-AGAGCCCTG-------------T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30071 15 -     45857 A--GTTT-AGAGCCCTG-------------T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23564 15 +     70610 A--GTTT-AGAGCCCTG-------------T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20489 15 +     36323 A--GTTT-AGAGCCCTG-------------T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11175 14 -     19938 ---GTTC-AGAACGCTG-------------T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29001 15 -     33796 T--GTTT-AGAACTCTG-------------T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3517 15 -     15404 T--GTTT-AGAACTCTG-------------T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7368 15 -     32913 A--CTTT-AGAGCCCTG-------------T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17781 15 -     40346 A--CTTT-AGAGCCCTG-------------T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18036 15 +    216457 A--CTTT-AGAGCCCTG-------------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17829 15 +     39636 A--CTTT-AGAGCCCTG-------------T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2193 15 +      5346 A--GTTT-ACAGCCCTG-------------T
i Chiropotes_albinasus.k141_1946120                      C 0 I 224
s Chiropotes_israelita.k141_313004                           40915 15 -    112038 A--GTTT-AGAGCCCTG-------------T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6487 15 +     34062 A--GTTT-AGAGCCCTG-------------T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341386 15 +  18827391 A--GTTT-AGAGCCCTG-------------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7931 15 -     44032 A--GTTT-AGAGCCCTG-------------T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302711 15 - 135778131 A--GTTT-AGAGCCCTG-------------T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10224 14 +     15858 ---ATTT-AGAATGCTG-------------C
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601800 14 -    839153 ---ATTT-AGAATGCTG-------------C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407147 15 -   2368649 A--GTTC-AGAGCCCCG-------------T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377025 15 - 200372422 A--GTTC-AGAGCCCCG-------------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                572 15 -     84244 A--GTTC-AGAGCCCCG-------------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805600 15 +  53390261 T--GTCT-ATAATCCTA-------------T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1114 15 -      8242 T--GTTT-AGGTCCCTG-------------T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40633  3 -     83289 ---------------TG-------------T
i Cricetomys_gambianus.CriGam_scaffold_14425             I 12 C 0
s Cricetulus_griseus.LT883664.1                          213113099  3 - 224834208 ---------------TG-------------T
i Cricetulus_griseus.LT883664.1                          I 12 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2651 15 +     87169 T--GCTT-AAAACCCTG-------------T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643130  3 -   1526836 ---------------TT-------------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 3 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3355  3 +     50838 ---------------TA-------------T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 12 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2220  3 +     36344 ---------------TG-------------T
i Cuniculus_paca.CunPac_flattened_line_7025              I 12 C 0
s Dasypus_novemcinctus.JH564415.1                          2108512 14 -   2246927 ---ATGT-AGAGTGCGG-------------C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290937 15 +  12879189 T--GTTT-AGAACCCTG-------------C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863081 15 -  20541912 T--GCTC-AGAACCCTG-------------T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662814 15 -   1390856 T--GTTT-AGAACCCTG-------------C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137599 15 -    198055 T--GTTT-AGAACCCTG-------------T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96830  3 -    115145 ---------------TG-------------T
i Dinomys_branickii.DinBra_scaffold_10381                I 12 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8274  3 +     14636 ---------------TG-------------G
i Dolichotis_patagonum.DolPat_scaffold_80628             I 14 C 0
s Dipodomys_ordii.KN672350.1                              18948703  3 -  37912305 T--GT--------------------------
i Dipodomys_ordii.KN672350.1                             C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_89095                   3650  3 -     10735 T--GT--------------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 3
s Echinops_telfairi.JH980293.1                            62852267 14 - 111700974 C--G-TT-AGAACTCTG-------------G
i Echinops_telfairi.JH980293.1                           C 0 I 4
s Eidolon_helvum.AWHC01266696.1                               4644 15 +     19438 t--gttt-agaaCCTTG-------------T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         7814888 15 -  10337057 ---------------TG-CTTAGAGCCCTGA
i Elephantulus_edwardii.JH947257.1                       C 0 N 0
s Ellobius_talpinus.LOJH01026522.1                           11348  3 +     18970 ---------------TA-------------G
i Ellobius_talpinus.LOJH01026522.1                       I 12 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29368  3 +    110024 T--GT--------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 12
s Enhydra_lutris.KZ291758.1                               24914484 15 +  41312741 T--ACTT-AGAACCATA-------------T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576711 15 +  14770903 T--GTTT-AGAACCCTG-------------T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039803 14 -   4378816 T--GTTT-AGC-TCCTG-------------T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373737 14 +  39960074 T--GTTT-AGC-TCCTG-------------T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410523 14 -    498745 T--GTTT-AGC-TCCTG-------------T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260909 15 +  21539334 A--GTTT-AGAGCCCTG-------------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13109 15 -     24895 T--GTTT-AGAACTCTG-------------T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40818 15 -     70999 T--GTTT-AGAACTCTG-------------T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84780 15 +    112731 T--GTTT-AGAACTCTG-------------T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41353 15 +     68309 T--GTTT-AGAACTCTG-------------T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51675 15 -     65740 T--GTTT-AGAACTCTG-------------T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22308 15 -     75513 T--GTTT-AGAACTCTG-------------T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46501 15 -     97555 T--GTTT-AGAACTCTG-------------T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3228 15 +     30972 T--GTTT-AGAACTCTG-------------T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40948 15 -     52037 T--GTTT-AGAACTCTG-------------T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57352 15 -    111500 T--GTTT-AGAACTCTG-------------T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245103 15 - 206538554 T--GCTT-AGAACTCTG-------------T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114889 15 - 205367284 T--GCTT-AGAACTCCG-------------T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 25991 15 -     30238 T--GCTT-AGAACTCCG-------------T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17422 13 +     18121 T--GTTT-AGGACTCT---------------
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32297  3 -     36801 ---------------TG-------------T
i Glis_glis.GliGli_scaffold_33859                        I 12 C 0
s Gorilla_beringei.k141_3358147                               3825 15 -      8343 A--GTTT-AGAGCCCTG-------------T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252836 15 - 186649187 A--GTTT-AGAGCCCTG-------------T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11613  3 +     11903 ---------------TG-------------T
i Graphiurus_murinus.GraMur_scaffold_90206               I 12 C 0
s Hapalemur_alaotrensis.k141_330369                          13036 15 -     40692 T--GTTT-AGAACTCTG-------------T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34437 15 +     49394 T--GTTT-AGAACTCTG-------------T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59306 15 -     66874 T--GTTT-AGAACTCTG-------------T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8179 15 -     42923 T--GTTT-AGAACTCTG-------------T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15179 15 -     53142 T--GTTT-AGAACTCTG-------------T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29131 15 -    327341 T--GCTT-AGAACCCTG-------------T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925414  3 -  22651954 ---------------tG-------------T
i Heterocephalus_glaber.JH602082.1                       I 12 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49187 15 +     49977 T--GTCT-AGAACCCTT-------------T
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140824 15 -    630532 A--GTTT-AGAGCCCTG-------------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67807 15 +     83186 T--GCTT-AGAACCCTG-------------T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69695  3 +    143317 T--GT--------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 14
s Hylobates_agilis.k141_1155965                               3859 15 +     12352 A--GTTT-AGAGCCCTG-------------T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11042 15 +     55766 A--GTTT-AGAGCCCTG-------------T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050638 15 + 191637585 A--GTTT-AGAGCCCTG-------------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799516 15 +  11177569 A--GTTT-AGAGCCCTG-------------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385123  9 +   7955117 ---------------TAACT-A-A-C----G
i Ictidomys_tridecemlineatus.JH393364.1                  I 11 C 0
s Indri_indri.k141_2415743                                     689 15 +     11955 T--GTTT-AGAACTCTG-------------T
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237553  3 +   9596543 ---------------TG-------------T
i Jaculus_jaculus.JH725527.1                             I 12 C 0
s Lagothrix_lagothricha.k141_246028                          41636 15 +    110728 A--GTTT-AGAGCCCTG-------------T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60186 15 -     65777 T--CTTT-AGAACCCTG-------------T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 1
s Lemur_catta.scaffold_24                                 14757827 15 +  30322482 T--GTTT-AGAACTCTG-------------T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2301 15 -     13097 A--GTTT-ACAGCCCTG-------------T
i Leontocebus_fuscicollis.k141_2994775                   C 0 I 262
s Leontocebus_illigeri.k141_2951200                           2252 15 +      5940 A--GTTT-ACAGCCCTG-------------T
i Leontocebus_illigeri.k141_2951200                      C 0 I 66
s Leontocebus_nigricollis.k141_3905062                        1886 15 -      5717 A--GTTT-ACAGCCCTG-------------T
i Leontocebus_nigricollis.k141_3905062                   C 0 I 262
s Leontopithecus_chrysomelas.k141_1327670                     8502 15 -     11567 A--GTTT-ACAGCCCTG-------------T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9883 15 -     12945 A--GTTT-ACAGCCCTG-------------T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7358 15 +     29618 T--GTTT-AGAACTCTG-------------T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7355 15 +     31569 T--GTTT-AGAACTCTG-------------T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7366 15 +     24756 T--GTTT-AGAACTCTG-------------T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7364 15 +     16388 T--GTTT-AGAACTCTG-------------T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811865 15 -   3914936 T--GCTT-AGAACCCTA-------------T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16212 15 +     24238 T--GTTT-AGAACCACA-------------T
i Lepus_americanus.LepAme_scaffold_56121                 I 1 C 0
s Lophocebus_aterrimus.ctg367                               331013 15 -   1826925 A--GTTT-AGAGCCCTG-------------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39078624  3 +  43346337 ---------------TG-------------T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613016 15 +  59628241 T--GCTT-AGAACGCTG-------------T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43330 15 -     61512 A--GTTT-AGAGCCCTG-------------T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 370991 15 -  60120075 A--GTTT-AGAGCCCTG-------------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23246 15 +     30207 A--GTTT-AGAGCCCTG-------------T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20349 15 -     24934 A--GTTT-AGAGCCCTG-------------T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23198 15 +     30527 A--GTTT-AGAGCCCTG-------------T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34387 15 -     50087 A--GTTT-AGAGCCCTG-------------T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44158 15 +     51645 A--GTTT-AGAGCCCTG-------------T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413327 15 - 187317192 A--GTTT-AGAGCCCTG-------------T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397550 15 +  25927173 A--GTTT-AGAGCCCTG-------------T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46714 15 -     62418 A--GTTT-AGAGCCCTG-------------T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23369 15 +     24253 A--GTTT-AGAGCCCTG-------------T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43189 15 +     59329 A--GTTT-AGAGCCCTG-------------T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269117 15 +    668171 A--GTTT-AGAGCCCTG-------------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20304 15 +     21031 A--GTTT-AGAGCCCTG-------------T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  901 15 +     17132 A--GTTT-AGAGCCCTG-------------T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221608 14 -    270270 T--GGTT-AGAA-CTTG-------------T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320401 15 +  24302211 A--GTTT-AGAGCCCTG-------------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355233 15 -    752769 A--GTTT-AGAGCCCTG-------------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671887 15 -    737560 t--gttt-ataagTCTA-------------T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219175 15 +    317179 T--GTTT-ACAAGTCTA-------------T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499348  9 +  40650429 ---------------TAACT-A-A-C----G
i Marmota_marmota.CZRN01000018.1                         I 11 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148809 13 +    207569 T--GTTT-AGAACCTT---------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24358 15 -     74585 T--ACTT-AGAACCATA-------------T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47005  3 -    140813 ---------------TG-------------T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 12 C 0
s Mesocricetus_auratus.KB708134.1                         17427652  3 +  29670104 ---------------TG-------------T
i Mesocricetus_auratus.KB708134.1                        I 12 C 0
s Mico_argentatus.k141_582562                                 8264 15 +     17804 A--GTTT-ACAGCCCTG-------------T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9048 15 -     12984 A--GTTT-ACAGCCCTG-------------T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     16999 15 -     26561 A--GTTT-ACAGCCCTG-------------t
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982968 15 +  93316391 t--gttt-agaaCTCTG-------------T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43362 15 +    145209 G--GTTT-AGAACTCTG-------------G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183025 15 +    200668 T--GCTC-AGAACCCTG-------------T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960763  3 +  27267610 T--GT--------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 12
s Miniopterus_natalensis.LDJU01000034.1                    6361140 15 -   8254450 T--GTTT-AGAACCCTG-------------T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40041 15 -     48117 T--GTTT-AGAACCCTG-------------T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20427 15 -     27822 A--GTTT-AGAGCGCTG-------------T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6876 15 +     27589 T--GCTT-AGAACCCTA-------------T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50759 15 -     62432 T--GTTT-AGAACTCTG-------------T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177179 15 +    366855 T--GTTC-AGAGCCCTG-------------C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16884 15 -     63510 T--GCTT-AGAACCCTG-------------T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37055 15 +     47283 T--GTTT-AGTACCCTG-------------T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80884  3 -     86153 ---------------TG-------------T
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 11 C 0
s Mus_caroli.FMAL02030609.1                                   5069  3 +      5579 t--gt--------------------------
i Mus_caroli.FMAL02030609.1                              C 0 I 12
s Mus_musculus.chr8                                       41685772  3 + 129401213 T--GT--------------------------
i Mus_musculus.chr8                                      C 0 I 12
s Mus_spretus.CM004101.1                                  39495090  3 + 130317789 t--gt--------------------------
i Mus_spretus.CM004101.1                                 C 0 I 12
s Mustela_putorius.JH418006.1                             14353510 15 +  14710649 T--ACTT-AGAACCATA-------------T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791100 15 +  10118263 T--GTTT-AGAACCCTG-------------T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385462 15 +   6019432 t--gttt-agaaCCCTG-------------T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381282 15 +   4330536 T--GTTT-AGAACCCTG-------------T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3841 15 +      3929 T--GTTT-AGAACCCTG-------------T
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117946 11 +    130748 ----TTT-AGCAT--AG-------------C
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              27006 15 +     34575 A--GTTC-AGAGCCCCG-------------C
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467468 15 -  31847680 T--GCTT-AGAACCCTA-------------T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   125989 15 -    149072 T--GTTT-AGAACCCTG-------------T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51748 15 -    132029 A--GTTT-AGAGCCCTG-------------T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7843 15 -     16345 A--GTTT-AGAGCCCTG-------------T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13728 15 +     22201 A--GTTT-AGAGCCCTG-------------T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412012 13 -  22158432 A--GTTT-AGAGCCCT---------------
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24126 15 -     54323 A--GTTT-AGAGCCCTG-------------T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196618 15 +   9404916 T--ACTT-AGAACGCTG-------------T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2549587 15 -   3988456 t--tttt-agaactgcA-------------T
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Octodon_degus.JH651603.1                                11045861  3 -  11899542 ---------------TG-------------T
i Octodon_degus.JH651603.1                               I 12 C 0
s Odobenus_rosmarus.KB229312.1                             1450064 15 +   2017862 T--GCTT-AGAACCCTA-------------T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1506  3 -     41509 ---------------TG-------------A
i Onychomys_torridus.OnyTor_scaffold_28377               I 12 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91120  3 -    140218 T--GT--------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 12
s Orycteropus_afer.OryAfe_flattened_line_171931              11730 15 -     14239 T--CTTT-AGAACTCTG-------------T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102065  2 - 174332312 T--A---------------------------
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37655 15 +    559221 T--GCTT-AGAACGCTG-------------T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_troglodytes.CM009242.2                               1470841 15 - 189151597 A--GTTT-AGAGCCCTG-------------T
i Pan_troglodytes.CM009242.2                             C 0 I 10
s Panthera_onca.PanOnc_flattened_line_3271                   22812 15 -    230217 T--GCTT-AGAACTCCA-------------T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460138 15 -  18783137 T--GCTT-AGAACTCCA-------------T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970858 15 +   8748460 T--GCTT-AGAACTCCG-------------T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241241 15 - 183742232 A--GTTT-AGAGCCCTG-------------T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7705 15 +     21308 A--GTTT-AGAGCCCTG-------------T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288744 15 -  20919399 A--GTTT-AGAGCCCTG-------------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20360 15 -     27687 A--GTTT-AGAGCCCTG-------------T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13496 15 +     16796 A--GTTT-AGAGCCCTG-------------T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20306 15 -     23640 A--GTTT-AGAGCCCTG-------------T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13450 15 +     78924 T--GCTT-AGAACCCTG-------------G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245224  3 +  18517816 ---------------TG-------------T
i Peromyscus_maniculatus.KI615324.1                      I 12 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30318  3 -     56120 ---------------TG-------------T
i Petromus_typicus.PetTyp_scaffold_17301                 I 12 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37947  3 +     38305 T--GT--------------------------
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 I 3
s Piliocolobus_badius.k141_2704958                             522 15 +     55023 A--GTTC-AGAGCCCCG-------------C
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             523 15 +     40849 A--GTTC-AGAGCCCCG-------------C
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252271 15 +  14605196 A--GTTC-AGAGCCCCG-------------C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1234 15 +     22231 T--GTTT-AGAACCCTG-------------T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63273 15 +    207309 A--GTTT-AGAGCCCTG-------------T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4367 15 -     25401 A--GTTT-AGAGCCCTG-------------T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30108 15 +     58159 A--GTTT-AGAGCCCTG-------------T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30384 15 +     63561 A--GTTT-AGAGCCCTG-------------T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30147 15 +     51148 A--GTTT-AGAGCCCTG-------------T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555114 15 -   4542175 A--GTTT-AGAGCCCTG-------------T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30131 15 +     51125 A--GTTT-AGAGCCCTG-------------T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6537 15 +     39866 A--GTTT-AGAGCCCTG-------------C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1622 15 -      9282 A--GTTT-AGAGCCCTG-------------C
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41026 15 -     87950 A--GTTT-ACAGCCCTG-------------C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41419 15 -     88961 A--GTTT-AGAGCCCTG-------------C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6118 15 -     39403 A--GTTT-AGAGCCCTG-------------C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41070 15 +     87928 A--GTTT-AGAGCCCTG-------------C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6115 15 -     60166 A--GTTT-AGAGCCCTG-------------C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13051 15 -     67232 A--GTTT-AGAGCCCTG-------------C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40967 15 -     90634 A--GTTT-AGAGCCCTG-------------C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42435 15 +     89403 A--GTTT-AGAGCCCTG-------------C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175969 15 - 189387572 A--GTTT-AGAGCCCTG-------------T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190787 15 -   9816681 A--GTTT-AGAGCCCTG-------------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25620 15 +     69807 G--GCTC-AGAGCCCCG-------------C
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42815 15 -     80239 G--GCTC-AGAGCCCCG-------------C
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980983 15 +   4620579 T--GTTT-AGAACTCTG-------------T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564450 15 -   2598838 T--GTTT-AGAACTCTG-------------T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2086 15 -      7103 T--GTTT-AGAACTCTG-------------T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2683 15 -     11706 T--GTTT-AGAACTTTG-------------T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6419 15 -     30655 T--GTTT-AGAACTCTG-------------T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32744 15 +     46564 T--GTTT-AGAACTCTG-------------T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93015 15 -     98465 T--GTTT-AGAACTCTG-------------T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6652 15 +     35169 T--GTTT-AGAACTCTG-------------T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34549  3 +     52041 ---------------TG-------------T
i Psammomys_obesus.NESX01036366.1                        I 12 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3075 15 -     18639 T--ACTT-AGAACCATA-------------T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839237 14 -  28871421 C--GTTT-TGAACCTT--------------T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535803 15 -   4952924 t--gttt-tgaaccTTG-------------T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097454 15 +  38429054 T--GCTT-AGAACTCCG-------------T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25030 15 +     91421 A--GTTC-AGAGCCCCG-------------C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151523 15 -   7812017 A--GTTC-AGAGCCCCG-------------C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5900 15 +     72585 A--GTTC-AGAGCCCCG-------------C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020995  3 -  90668790 ---------------TG-------------C
i Rattus_norvegicus.chr16                                I 12 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913199 15 +   3329780 t--gttt-agaaCCTTT-------------T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26840 15 +     27361 A--GTTC-AGAGCCCCG-------------C
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120207 15 + 195417433 A--GTTC-AGAGCCCCG-------------C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234448 15 -   7961872 A--GTTC-AGAGCCCCG-------------C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73219 15 -    116970 T--GTTT-AGAACCTTG-------------T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2191 15 +     27962 A--GTTT-ACAGCCCTG-------------T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2198 15 +      6077 A--GTTT-ACAGCCCTG-------------T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2234 15 +      5971 A--GTTT-ACAGCCCTG-------------G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2288 15 +      5932 A--GTTT-ACAGCCCTG-------------G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               471 15 -      4390 A--GTTT-ACAGCCCTG-------------G
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       389539 15 - 209938924 A--GTTT-ACAGCCCTG-------------T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2236 15 +      5979 A--GTTT-ACAGCCCTG-------------G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               2585 15 -      4301 A--GTTT-ACAGCCCTG-------------T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236696 15 +   5703754 A--GTTT-AGAGCCCTG-------------T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6286 15 +     21866 A--GTTT-AGAGCCCTG-------------T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114392 15 +    313613 T--GTTT-ATAATCCTG-------------T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23347 15 +     27374 A--GTTC-AGAGCCCCG-------------C
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26866 15 +     58920 A--GTTC-AGAGCCCCG-------------C
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13362 15 -     45317 A--GTTC-AGAGCCCCG-------------C
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21020 15 -     42441 A--GTTC-AGAGCCCCG-------------C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23700 15 -     29113 A--GTTC-AGAGCCCCG-------------C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26769 15 -     48123 A--GTTC-AGAGCCCCG-------------C
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47076  3 +     77746 ---------------TG-------------T
i Sigmodon_hispidus.SigHis_scaffold_20193                I 12 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856720 15 -   1910179 T--ACTT-GGAACCCTG-------------T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866706  9 +   3870691 ---------------TAACT-A-A-C----G
i Spermophilus_dauricus.KZ294078.1                       I 11 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4887 15 -     97271 T--TCTT-AGAACCCTA-------------T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123291 15 +    196729 T--GCTT-AGAACCCTG-------------T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389285 15 +   1523678 A--GTTT-AGAGCCCTG-------------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12042 15 +     22964 T--ATTT-AGAACCCTG-------------T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1066 12 +      5583 ---ATTT-AGCAT--AG-------------C
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189976 15 +    199430 T--TCTT-AGAACCCTG-------------T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103927 15 -    539355 T--TCTT-AGAACCCTG-------------T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5285 15 +      6850 T--GTTC-AGAACCCTG-------------C
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5326 15 +     20590 T--GTTC-AGAACCCTG-------------C
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351227 15 - 186847797 A--GTTT-AGAGCCCTG-------------T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22643  3 -     33621 ---------------TG-------------T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 12 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18198 14 -     31044 ---ATTT-ATAACGCTG-------------C
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478085 15 -    610378 T--GTTC-AGAACCCTG-------------T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18911 15 +     26378 A--GTTC-GGAGCCCCG-------------C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31575 15 -     78344 A--GTTC-AGAGCCCCG-------------C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18232 15 +     25722 A--GTTC-GGAGCCCCG-------------C
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26457 15 -     62838 A--GTTC-AGAGCCCCG-------------C
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26574 15 +     46913 A--GTTC-AGAGCCCCG-------------C
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7380 15 -     28527 A--GTTC-GGAGCCCCG-------------C
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28396 15 -     64340 A--GTTC-AGAGCCCCG-------------C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26433 15 -     63452 A--GTTC-AGAGCCCCG-------------C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7876 15 +     22490 A--GTTC-AGAGCCCCG-------------C
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1304 15 -      6147 A--GTTC-GGAGCCCCG-------------C
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8278 15 -     13050 A--GTTC-AGAGCCCCG-------------C
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253517 15 -   6242583 A--GTTC-AGAGCCCCG-------------C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59268 15 +     59866 A--GTTC-AGAGCCCCG-------------C
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     600 15 -     21056 T--GTTG-ATAATTCTG-------------C
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180226 15 +   5085361 T--GCTT-GGAACCCTA-------------T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23628 15 -     30710 T--GTTT-AGAAATCTG-------------T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22535 15 -    147434 T--GTTT-AGAAATCTG-------------T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103377 15 -    112863 T--GCTT-AGAACACTG-------------T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172490  3 -    224448 ---------------TA-------------T
i Xerus_inauris.XerIna_scaffold_2302                     I 12 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27262 15 -     86975 T--GCTT-AGAACCCTA-------------T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1736  3 +      2695 ---------------TG-------------T
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 12 C 0
e Perodicticus_potto.k141_1854441                            16752  2 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          24393  2 +     31479 I
e Otolemur_garnettii.GL873799.1                             351112  2 +   1103335 I
e Otolemur_crassicaudatus.k141_649260                        38109  2 -     51505 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562966  2 - 199412804 I
e Nycticebus_coucang.k141_3846325                             1485  2 -      3937 I
e Nycticebus_bengalensis.LG01                             93634727  2 + 196305487 I
e Loris_tardigradus.ctg83                                  5042376  2 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            8715  2 +     19643 I
e Galagoides_demidoff.k141_561628                            18553  2 -     32986 I
e Galago_senegalensis.k141_991736                             6501  2 +     22493 I
e Galago_moholi.ctg3793                                     122956  2 -    137831 I
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508  0 -   4065304 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Pteronotus_parnellii.KE847780.1                            50154 13 -     66298 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786  8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3501 10 +     36723 A-------GT-C---A----GTGT-----T
s Acinonyx_jubatus.LLWD01001279.1                           811206 10 +   1699592 A-------GT-C---A----GTGC-----T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18447 10 +     63021 A-------GT-T---A----GGTC-----T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413735 10 +  29979442 G-------GT-C---A----GTGC-----T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213843 13 +    347723 G-------GT-CCTAA----GTGC-----T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16369 10 -     61208 A-------GT-C---A----GTGC-----T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45896 10 +     53615 A-------GT-C---A----GTGC-----T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41835 10 +     44087 A-------GT-C---A----GTGC-----T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14473 10 -     21945 A-------GT-C---A----GTGC-----T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16150 10 +     32033 A-------GT-C---A----GTGC-----T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70597 10 -     84148 A-------GT-C---A----GAGC-----T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42830 10 -     78289 A-------GT-C---A----GAGC-----T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42276 10 +     55831 A-------GT-C---A----GAGC-----T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40717 10 -     64179 A-------GT-C---A----GAGC-----T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22364 10 -     24835 A-------GT-C---A----GAGC-----T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39347 10 +     45454 A-------GT-C---A----GAGC-----T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45045 10 +     70886 A-------GT-C---A----GAGC-----T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7170 10 +     30854 A-------GT-C---A----GAGC-----T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31309 10 +     42133 A-------GT-C---A----GAGC-----T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175064 10 -    412891 G-------GT-C---A----GTTC-----T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49119 10 -     65372 A-------GT-C---A----GGGT-----G
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42866 10 +     43593 A-------GT-C---A----GGGC-----T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670879 10 +   5030052 A-------GT-C---A----GGGC-----T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22521 10 -     23494 A-------GT-C---A----GGGC-----T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7657 10 +      8415 A-------GT-C---A----GGGC-----T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14397 10 -     32367 A-------GT-C---A----TTGC-----T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3354 10 -     15198 T-------GT-C---A----GTGC-----T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273109 10 +  21539123 A-------GT-C---A----GAGC-----T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9276 10 +     48076 A-------GT-C---A----GAGC-----T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4413 10 -     28759 A-------GT-C---A----GAGC-----T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31966 10 +     44353 A-------GT-C---A----GAGC-----T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47337 10 -     71267 A-------GT-C---A----GAGC-----T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21396 10 -     33135 A-------GT-C---A----GAGC-----T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4581 10 +     11645 A-------GT-C---A----GTGC-----T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4587 10 -     19611 A-------GT-C---A----GTGC-----T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6301 10 +     28062 A-------GT-C---A----GAGC-----C
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41595 10 -     91139 A-------GT-C---A----GAGC-----C
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19121 10 +     95584 A-------GT-C---A----GAGC-----C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19034 10 +    119600 A-------GT-C---A----GAGC-----C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callimico_goeldii.k141_1609886                              8168  6 -     13885 A-------GT-C---A----G---------
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_473390                           16868 10 +     17162 a-------gt-c---a----gggc-----c
i Callithrix_geoffroyi.k119_473390                       C 0 N 0
s Callithrix_jacchus.pat_scaffold_3                      165451823 10 + 189096842 a-------gt-c---a----gggc-----c
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 756
s Callithrix_kuhlii.k119_404482                              18116 10 -     18408 a-------gt-c---a----gggc-----c
i Callithrix_kuhlii.k119_404482                          C 0 N 0
s CanFam4.chr16                                           42503762 10 +  60362399 G-------GT-C---A----GTGC-----T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7398 10 -     23171 G-------GT-C---A----GTGC-----T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220741 10 +   9314153 G-------GT-C---A----GTGC-----T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613876 10 +  59632846 G-------GT-C---A----GTGC-----T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105457 10 -  63665305 G-------GT-C---A----GTGC-----T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268661 10 +    496798 A-------GT-C---A----GTGC-----T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3646 10 +      5315 A-------GT-C---G----GTGC-----T
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994334 10 +  23392119 A-------GT-C---A----CTGC-----T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997776 10 +  23407841 A-------GT-C---A----CTGC-----T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60877 10 -     66877 A-------GT-C---A----CTGC-----T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3387 10 -     12580 A-------GT-C---A----GGGC-----T
i Cebuella_niveiventris.k141_592277                      C 0 I 134
s Cebuella_pygmaea.k141_145798                               41285 10 +     53515 A-------AT-C---A----GGGC-----T
i Cebuella_pygmaea.k141_145798                           C 0 I 291
s Cebus_albifrons.Contig27                                  369492 10 -  26074798 A-------GT-C---A----GGGC-----T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6381 10 -     34880 A-------GT-C---A----GGGC-----T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65476 10 -     89041 A-------GT-C---A----GGGC-----T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          585 10 -      5494 A-------GT-C---A----GCGC-----T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490537 10 -  27778364 A-------GT-C---A----GTGC-----T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17370 10 +     27315 A-------GT-C---A----GTGC-----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139075 10 -   4669795 A-------GT-C---A----GTGC-----T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42815 10 +     47900 A-------GT-C---A----GTGC-----T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42648 10 -     44860 A-------GT-C---A----GTGC-----T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42631 10 -    148725 A-------GT-C---A----GTGC-----T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9888 10 -     17524 A-------GT-C---A----GTAC-----T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25610 10 -     34525 A-------GT-C---A----GTGC-----T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30086 10 -     45857 A-------GT-C---A----GTGC-----T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23579 10 +     70610 A-------GT-C---A----GTGC-----T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20504 10 +     36323 A-------GT-C---A----GTAC-----T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11189 10 -     19938 G-------GC-C---A----GTGT-----T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29016 10 -     33796 A-------GT-C---A----GTGC-----T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3532 10 -     15404 A-------GT-C---A----GTGC-----T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7383 10 -     32913 A-------GT-C---A----GAGC-----C
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17796 10 -     40346 A-------GT-C---A----GAGC-----C
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18051 10 +    216457 A-------GT-C---A----GAGC-----C
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17844 10 +     39636 A-------GT-C---A----GAGC-----C
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2432 10 +      5346 A-------GT-C---A----GGGC-----T
i Chiropotes_albinasus.k141_1946120                      I 224 C 0
s Chiropotes_israelita.k141_313004                           40930 10 -    112038 A-------GT-C---A----GAGC-----C
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6502 10 +     34062 A-------GT-C---A----GAGC-----C
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341401 10 +  18827391 A-------GT-C---A----GTGC-----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7946 10 -     44032 A-------GT-C---A----GTGC-----T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302726 10 - 135778131 A-------GT-C---A----GTGC-----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10238 10 +     15858 A-------GC-C---A----GTGT-----T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601814 10 -    839153 A-------GC-C---A----GTGT-----T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407162 10 -   2368649 A-------GT-C---A----GTGC-----T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377040 10 - 200372422 A-------GT-C---A----GTGC-----T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                587 10 -     84244 A-------GT-C---A----GTGC-----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805615 10 +  53390261 A-------GA-C---A----GTAC-----T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1129 10 -      8242 A-------GT-C---A----GTGC-----A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40636 10 -     83289 A-------GT-C---A----GGGC-----T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113102 10 - 224834208 A-------GT-A---A----ATGC-----T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2666  4 +     87169 A-------GT-C------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Ctenodactylus_gundi.CteGun_scaffold_65                    643133 10 -   1526836 T-------GT-C---A----TTGT-----T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3358 10 +     50838 A-------GT-C---A----TTGC-----T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2223 10 +     36344 A-------GT-C---A----TTGT-----T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108526 10 -   2246927 A-------GC-C---A----GGGT-----T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290952 10 +  12879189 A-------GT-C---A----GTGC-----T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863096 10 -  20541912 A-------GT-C---A----GTGC-----T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662829 10 -   1390856 A-------AT-C---A----GTGC-----T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137614 10 -    198055 A-------GT-C---A----GTGC-----T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96833 10 -    115145 A-------GT-C---A----CTGG-----T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948709  8 -  37912305 G-------AA-T---A----CTG-------
i Dipodomys_ordii.KN672350.1                             I 3 I 1
s Dipodomys_stephensi.DipSte_scaffold_89095                   3656  8 -     10735 G-------AA-T---A----CTG-------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 3 I 1
s Dolichotis_patagonum.DolPat_scaffold_80628                  8277 10 +     14636 A-------GT-C---A----CTGC-----T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852285 10 - 111700974 A-------GC-C---A----GTTC-----C
i Echinops_telfairi.JH980293.1                           I 4 C 0
s Eidolon_helvum.AWHC01266696.1                               4659 10 +     19438 A-------GT-C---A----GTGC-----T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105826 10 -  10337057 A-------AC-C---A----GTGC-----T
i Elephantulus_edwardii.JH947257.1                       N 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29383 10 +    110024 A-------GT-C---A----GGGC-----T
i Ellobius_lutescens.LOEQ01008920.1                      I 12 C 0
s Ellobius_talpinus.LOJH01026522.1                           11351 10 +     18970 A-------GT-C---A----GGGC-----T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914499  5 +  41312741 G-------GT-C---A--------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576726 10 +  14770903 A-------GT-C---A----GTGC-----T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039817 15 -   4378816 A-------GT-C---A----GTGCTACAGT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373751 15 +  39960074 A-------GT-C---A----GTGCTACAGT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410537 15 -    498745 A-------GT-C---A----GTGCTACAGT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260924 10 +  21539334 A-------GT-C---A----GTGC-----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13124 10 -     24895 A-------GT-C---A----GTGC-----T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40833 10 -     70999 A-------GT-C---A----GTGC-----T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84795 10 +    112731 A-------GT-C---A----GTGC-----T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41368 10 +     68309 A-------GT-T---A----GTGC-----T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51690 10 -     65740 A-------GT-C---A----GTGC-----T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22323 10 -     75513 A-------GT-T---A----GTGC-----T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46516 10 -     97555 A-------GT-C---A----GTGC-----T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3243 10 +     30972 A-------GT-C---A----GTGC-----T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40963 10 -     52037 A-------GT-C---A----GTGC-----T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57367 10 -    111500 A-------GT-C---A----GTGC-----T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245118 10 - 206538554 A-------GT-C---A----GTGC-----T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114904 10 - 205367284 A-------GT-C---A----GTGC-----T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26006 10 -     30238 A-------GT-C---A----GTGC-----T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17435 10 +     18121 A-------GT-C---A----GTGC-----C
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 4
s Glis_glis.GliGli_scaffold_33859                            32300 10 -     36801 A-------GT-C---A----TTGC-----T
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3840 10 -      8343 A-------GT-C---A----GTGT-----T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252851 10 - 186649187 A-------GT-C---A----GTGT-----T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11616 10 +     11903 A-------AT-C---A----TTGC-----T
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13051 10 -     40692 A-------GT-C---A----GTGC-----T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34452 10 +     49394 A-------GT-C---A----GTGC-----T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59321 10 -     66874 A-------GT-C---A----GTGC-----T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8194 10 -     42923 A-------GT-C---A----GTGC-----T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15194 10 -     53142 A-------GT-C---C----GTGC-----T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29146 10 -    327341 A-------GT-C---A----GTGC-----T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925417 10 -  22651954 A-------GT-C---A----TTCC-----T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49202 10 +     49977 A-------GT-C---A----GTGC-----T
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140839 10 -    630532 A-------GT-C---A----GTGC-----T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67822 10 +     83186 A-------GT-C---A----GTGC-----T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69712 10 +    143317 A-------GT-C---A----CTGC-----T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 14 C 0
s Hylobates_agilis.k141_1155965                               3874 10 +     12352 A-------GT-C---A----GTGC-----T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11057 10 +     55766 A-------GT-C---A----GTGC-----T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050653 10 + 191637585 A-------GT-C---A----GTGC-----T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799531 10 +  11177569 A-------GT-C---A----GTGC-----T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385132 10 +   7955117 A-------GT-C---A----TTGC-----T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     704 10 +     11955 A-------GT-C---A----GTGC-----T
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237556 10 +   9596543 G-------GT-C---A----GTGA-----T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41651 10 +    110728 A-------GT-C---A----GAGC-----T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60202  7 -     65777 G-------GT-C---A----AT--------
i Lasiurus_borealis.LasBor_scaffold_16567                I 1 I 1
s Lemur_catta.scaffold_24                                 14757842 10 +  30322482 A-------GT-C---A----GTGC-----T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8517 10 -     11567 A-------GT-C---A----GGGC-----T
i Leontopithecus_chrysomelas.k141_1327670                C 0 I 12
s Leontopithecus_rosalia.k141_349454                          9898 10 -     12945 A-------GT-C---A----GGGC-----T
i Leontopithecus_rosalia.k141_349454                     C 0 I 12
s Lepilemur_ankaranensis.k141_567626                          7373 10 +     29618 A-------GT-C---A----GTGC-----T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7370 10 +     31569 A-------GT-C---A----GTGC-----T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7381 10 +     24756 A-------GT-C---A----GTGC-----T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7379 10 +     16388 A-------GT-C---A----GTGC-----T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811880 10 -   3914936 G-------GT-C---A----GTGC-----T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16227  6 +     24238 ---------------A----GCGC-----T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331028 10 -   1826925 A-------GT-C---A----GTGC-----T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39078627 10 +  43346337 A-------GC-C---G----GTGC-----T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613031 10 +  59628241 G-------GT-C---A----GTGC-----T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43345 10 -     61512 A-------GT-C---A----GTGC-----T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371006 10 -  60120075 A-------GT-C---A----GTGC-----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23261 10 +     30207 A-------GT-C---A----GTGC-----T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20364 10 -     24934 A-------GT-C---A----GTGC-----T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23213 10 +     30527 A-------GT-C---A----GTGC-----T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34402 10 -     50087 A-------GT-C---A----GTGC-----T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44173 10 +     51645 A-------GT-C---A----GTGC-----T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413342 10 - 187317192 A-------GT-C---A----GTGC-----T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397565 10 +  25927173 A-------GT-C---A----GTGC-----T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46729 10 -     62418 A-------GT-C---A----GTGC-----T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23384 10 +     24253 A-------GT-C---A----GTGC-----T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43204 10 +     59329 A-------GT-C---A----GTGC-----T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269132 10 +    668171 A-------GT-C---A----GTGC-----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20319 10 +     21031 A-------GT-C---A----GTGC-----T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  916 10 +     17132 A-------GT-C---A----GTGC-----T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221622 10 -    270270 A-------GT-C---A----GTGC-----A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320416 10 +  24302211 A-------GT-C---A----GTGC-----T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355248 10 -    752769 A-------GT-C---A----GTGC-----T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671902 10 -    737560 A-------GT-T---A----GTGC-----T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219190 10 +    317179 A-------GT-T---A----GTGC-----T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499357 10 +  40650429 A-------GT-C---A----TTGC-----G
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24373 10 -     74585 G-------GT-C---A----GTGC-----T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47008 10 -    140813 A-------GT-C---A----GGGT-----T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427655 10 +  29670104 A-------GT-C---A----GGGC-----T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8279 10 +     17804 a-------gt-c---a----gggc-----t
i Mico_argentatus.k141_582562                            C 0 I 408
s Mico_humeralifer.k141_1180625                               9063 10 -     12984 A-------GT-C---A----GGGC-----T
i Mico_humeralifer.k141_1180625                          C 0 I 151
s Mico_schneideri.k141_1877700                                     17014 10 -     26561 a-------gt-c---a----gggc-----t
i Mico_schneideri.k141_1877700                                 C 0 I 492
s Microcebus_murinus.CM007674.1                           74982983 10 +  93316391 A-------GT-C---A----GTGC-----T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43377 10 +    145209 A-------GC-C---G----GTTC-----C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183040 10 +    200668 A-------GT-C---A----GTGC-----T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960778 10 +  27267610 A-------AT-C---G----GGGC-----T
i Microtus_ochrogaster.CM001695.1                        I 12 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361155 10 -   8254450 A-------GT-C---A----GTGC-----T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40056 10 -     48117 A-------GT-C---A----GTGC-----T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20442 10 -     27822 A-------GT-C---A----GTGC-----T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6891 10 +     27589 G-------GT-C---A----GTGC-----T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50774 10 -     62432 A-------GT-C---A----GTGC-----T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177194 10 +    366855 A-------GT-C---A----GTGC-----T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16899 10 -     63510 A-------GT-C---A----GTGC-----T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37070 10 +     47283 A-------GT-C---A----GTGC-----C
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   5084 10 +      5579 A-------TT-C---A----GGGT-----T
i Mus_caroli.FMAL02030609.1                              I 12 C 0
s Mus_musculus.chr8                                       41685787 10 + 129401213 A-------TT-C---A----GGGT-----T
i Mus_musculus.chr8                                      I 12 C 0
s Mus_spretus.CM004101.1                                  39495105 10 + 130317789 A-------TT-C---A----GGGT-----T
i Mus_spretus.CM004101.1                                 I 12 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80887 10 -     86153 A-------GT-C---A----TTGC-----T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353525 10 +  14710649 G-------GT-C---A----GTGC-----T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791115 10 +  10118263 A-------GT-C---A----GTGC-----T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385477 10 +   6019432 A-------AT-C---A----ATGC-----T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381297 10 +   4330536 A-------GT-C---A----GTGC-----T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3856 10 +      3929 A-------GT-C---A----GTGC-----T
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117957 10 +    130748 A-------GT-C---A----GTGT-----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              27021 10 +     34575 A-------GT-C---A----GTGC-----T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467483 10 -  31847680 G-------GT-C---A----GTGC-----T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126004 10 -    149072 A-------GT-C---T----GTGC-----T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51763 10 -    132029 A-------GT-C---A----GTGC-----T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7858 10 -     16345 A-------GT-C---A----GTGC-----T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13743 10 +     22201 A-------GT-C---A----GTGC-----T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_a.k141_941534                                  24141 10 -     54323 A-------GT-C---A----GTGC-----T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196633 10 +   9404916 G-------GT-C---A----GTGC-----T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2549602 10 -   3988456 ---------------AATCAGTGC-----T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045864 10 -  11899542 A-------GT-C---A----TTGG-----T
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450079 10 +   2017862 G-------GT-C---A----GTGC-----T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91135 10 -    140218 A-------GT-C---A----AGGC-----T
i Ondatra_zibethicus.OndZib_scaffold_7387                I 12 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1509 10 -     41509 A-------GT-C---A----GGGC-----T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11745 10 -     14239 A-------AT-C---A----GTGC-----T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37670 10 +    559221 G-------GT-C---A----GTGC-----T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             10391 11 -     26668 A-------GTGC---A----GTGT-----T
i Pan_troglodytes.NBAG03003091.1                         I 2503 I 139
s Panthera_onca.PanOnc_flattened_line_3271                   22827 10 -    230217 A-------GT-C---A----GTGC-----T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460153 10 -  18783137 A-------GT-C---A----GTGC-----T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970873 10 +   8748460 A-------GT-C---A----GTGC-----T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241256 10 - 183742232 A-------GT-C---A----GTGC-----T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7720 10 +     21308 A-------GT-C---A----GTGC-----T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288759 10 -  20919399 A-------GT-C---A----GTGC-----T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20375 10 -     27687 A-------GT-C---A----GTGC-----T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13511 10 +     16796 A-------GT-C---A----GTGC-----T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20321 10 -     23640 A-------GT-C---A----GTGC-----T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13465 10 +     78924 A-------GT-C---A----GTGC-----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37953  8 +     38305 G-------AA-T---A----TTG-------
i Perognathus_longimembris.PerPac_flattened_line_28053   I 3 I 1
s Peromyscus_maniculatus.KI615324.1                         245227 10 +  18517816 A-------GT-C---A----GGGC-----T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30321 10 -     56120 A-------AT-A---A----TTGC-----T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             537 10 +     55023 A-------GT-C---A----GTGC-----T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             538 10 +     40849 A-------GT-C---A----GTGC-----T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252286 10 +  14605196 A-------GT-C---A----GTGC-----T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1249 10 +     22231 A-------GT-C---A----GTGC-----T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63288 10 +    207309 A-------GT-C---A----GAGC-----C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4382 10 -     25401 A-------GT-C---A----GAGC-----C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30123 10 +     58159 A-------GT-C---A----GAGC-----C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30399 10 +     63561 A-------GT-C---A----GAGC-----C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30162 10 +     51148 A-------GT-C---A----GAGC-----C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555129 10 -   4542175 A-------GT-C---A----GAGC-----C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30146 10 +     51125 A-------GT-C---A----GAGC-----C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6552 10 +     39866 A-------GT-C---A----GAGC-----C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1637 10 -      9282 A-------GT-C---A----GAGC-----C
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41041 10 -     87950 A-------GT-C---A----GAGC-----C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41434 10 -     88961 A-------GT-C---A----GAGC-----C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6133 10 -     39403 A-------GT-C---A----GAGC-----C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41085 10 +     87928 A-------GT-C---A----GAGC-----C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6130 10 -     60166 A-------GT-C---A----GAGC-----C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13066 10 -     67232 A-------GT-C---A----GAGC-----C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40982 10 -     90634 A-------GT-C---A----GAGC-----C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42450 10 +     89403 A-------GT-C---A----GAGC-----T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175984 10 - 189387572 A-------GT-C---A----GTGC-----T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190802 10 -   9816681 A-------GT-C---A----GTGC-----T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25635 10 +     69807 A-------GT-C---A----GCGC-----T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42830 10 -     80239 A-------GT-C---A----GCGC-----T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1980998 10 +   4620579 A-------GT-C---A----GTGC-----T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564465 10 -   2598838 A-------GT-C---A----GTGC-----T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2101 10 -      7103 A-------GT-C---A----GTGC-----T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2698 10 -     11706 A-------GT-C---A----GCGC-----T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6434 10 -     30655 A-------GT-C---A----GTGC-----T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32759 10 +     46564 A-------GT-C---A----GTGC-----T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93030 10 -     98465 A-------GT-C---A----GTGC-----T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6667 10 +     35169 A-------GT-C---A----GTGC-----T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34552  2 +     52041 A-------G---------------------
i Psammomys_obesus.NESX01036366.1                        C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3090 10 -     18639 G-------GT-C---A----ATGC-----T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839251 10 -  28871421 A-------GT-C---A----GTGC-----T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535818 10 -   4952924 A-------GT-C---A----GTGC-----T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097469 10 +  38429054 A-------GT-C---A----GTGC-----T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25045 10 +     91421 A-------GT-C---A----GTGC-----T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151538 10 -   7812017 A-------GT-C---A----GTGC-----T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5915 10 +     72585 A-------GT-C---A----GTGC-----T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37020998 10 -  90668790 A-------AT-C---A----GGGC-----T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913214 10 +   3329780 A-------GT-C---A----GTGC-----T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26855 10 +     27361 A-------GT-C---A----GTGC-----T
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120222 10 + 195417433 A-------GT-C---A----GTGC-----T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234463 10 -   7961872 A-------GT-C---A----GTGC-----T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73234 10 -    116970 A-------GT-C---A----GTGC-----T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2206  4 +     27962 G-------GT-C------------------
i Saguinus_bicolor.k141_1429097                          C 0 I 246
s Saguinus_geoffroyi.k141_3779887                             2213  1 +      6077 G-----------------------------
i Saguinus_geoffroyi.k141_3779887                        C 0 I 137
s Saguinus_imperator.k141_1898058                             2249 10 +      5971 A-------GT-C---A----GGGC-----T
i Saguinus_imperator.k141_1898058                        C 0 I 184
s Saguinus_inustus.k141_2469308                               2303  1 +      5932 A-----------------------------
i Saguinus_inustus.k141_2469308                          C 0 I 81
s Saguinus_labiatus.k141_2380921                               486 10 -      4390 AGTCAGGGCT--------------------
i Saguinus_labiatus.k141_2380921                         C 0 I 212
s Saguinus_midas.LG03                                       389554 10 - 209938924 G-------Gt-c---a----gggc-----t
i Saguinus_midas.LG03                                    C 0 I 308
s Saguinus_mystax.k141_8077960                                2251  1 +      5979 A-----------------------------
i Saguinus_mystax.k141_8077960                           C 0 I 81
s Saguinus_oedipus.k141_1466288                               2600  4 -      4301 G-------Gt-c------------------
i Saguinus_oedipus.k141_1466288                          C 0 I 202
s Sapajus_apella.ctg103                                     236711 10 +   5703754 A-------GT-C---A----GGGC-----T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6301 10 +     21866 A-------GT-C---A----GGGC-----T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114407 10 +    313613 A-------GG-C---A----GTAC-----T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23362 10 +     27374 A-------GT-C---A----GTGC-----T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26881 10 +     58920 A-------GT-C---A----GTGC-----T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13377 10 -     45317 A-------GT-C---A----GTGC-----T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21035 10 -     42441 A-------GT-C---A----GTGC-----T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23715 10 -     29113 A-------GT-C---A----GTGC-----T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26784 10 -     48123 A-------GT-C---A----GTGC-----T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47079  8 +     77746 A-------GT-C---A----GGG-------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126            1856735 10 -   1910179 T-------GT-C---A----GTAC-----T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866715 10 +   3870691 A-------GT-C---A----TTGC-----T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4902 10 -     97271 G-------GT-C---A----GTGC-----T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123306 10 +    196729 A-------GT-C---A----GCGC-----T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389300 10 +   1523678 A-------GT-C---A----GTGC-----T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12057 10 +     22964 G-------GT-C---A----GTGC-----T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1078 10 +      5583 A-------GT-C---A----GTGT-----T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      189991 10 +    199430 A-------TT-C---G----GTGC-----T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103942 10 -    539355 A-------TT-C---G----GTGC-----T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5300 10 +      6850 A-------GT-C---A----GTGC-----T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5341 10 +     20590 A-------GT-C---A----GTGC-----T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351242 10 - 186847797 A-------GT-C---A----GTGC-----T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22646 10 -     33621 A-------GT-C---A----TTAC-----T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18212 10 -     31044 C-------GC-C---A----GCGC-----T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478100 10 -    610378 A-------GT-C---A----GTAC-----T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18926 10 +     26378 A-------GT-C---A----GTGC-----T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31590 10 -     78344 A-------GT-C---A----GTGC-----T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18247 10 +     25722 A-------GT-C---A----GTGC-----T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26472 10 -     62838 A-------GT-C---A----GTGC-----T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26589 10 +     46913 A-------GT-C---A----GTGC-----T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7395 10 -     28527 A-------GT-C---A----GTGC-----T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28411 10 -     64340 A-------GT-C---A----GTGC-----T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26448 10 -     63452 A-------GT-C---A----GTGC-----T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7891 10 +     22490 A-------GT-C---A----GTGC-----T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1319 10 -      6147 A-------GT-C---A----GTGC-----T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8293 10 -     13050 A-------GT-C---A----GTGC-----T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253532 10 -   6242583 A-------GT-C---A----GTGC-----T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59283 10 +     59866 A-------GT-C---A----GTGC-----T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     615  9 -     21056 A-------GG-C---A----GTGC------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180241 10 +   5085361 G-------GT-C---A----GTGC-----T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23643 10 -     30710 A-------GT-C---A----GTGC-----T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22550 10 -    147434 A-------GT-C---A----GTGC-----T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103392 10 -    112863 G-------GT-C---A----GTGC-----T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172493 10 -    224448 A-------GT-C---A----TTGC-----T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27277 10 -     86975 G-------GT-C---A----GTGC-----T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1739 10 +      2695 A-------GT-C---A----GTGC-----T
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Callibella_humilis.k141_1233062                             8507 83 +     18648 I
e Perodicticus_potto.k141_1854441                            16752  2 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          24393  2 +     31479 I
e Otolemur_garnettii.GL873799.1                             351112  2 +   1103335 I
e Otolemur_crassicaudatus.k141_649260                        38109  2 -     51505 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562966  2 - 199412804 I
e Nycticebus_coucang.k141_3846325                             1485  2 -      3937 I
e Nycticebus_bengalensis.LG01                             93634727  2 + 196305487 I
e Loris_tardigradus.ctg83                                  5042376  2 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            8715  2 +     19643 I
e Galagoides_demidoff.k141_561628                            18553  2 -     32986 I
e Galago_senegalensis.k141_991736                             6501  2 +     22493 I
e Galago_moholi.ctg3793                                     122956  2 -    137831 I
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508  0 -   4065304 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Pteronotus_parnellii.KE847780.1                            50154 13 -     66298 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107102067  0 - 174332312 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Nomascus_siki_b.tarseq_93                            8412025  0 -  22158432 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786  8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Megaderma_lyra.MegLyr_scaffold_4542                       148822  0 +    207569 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Leontocebus_nigricollis.k141_3905062                        1901 262 -      5717 I
e Leontocebus_illigeri.k141_2951200                           2267 66 +      5940 I
e Leontocebus_fuscicollis.k141_2994775                        2316 262 -     13097 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3511 4 +     36723 GG-CT
s Acinonyx_jubatus.LLWD01001279.1                           811216 4 +   1699592 AG-TT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18457 4 +     63021 AG-TT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413745 4 +  29979442 GC-TT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213856 4 +    347723 GG-TT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16379 4 -     61208 GG-TT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45906 4 +     53615 GG-CT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41845 4 +     44087 GG-CT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14483 4 -     21945 GG-CT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16160 4 +     32033 GG-CT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70607 4 -     84148 GG-TT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42840 4 -     78289 GG-TT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42286 4 +     55831 GG-TT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40727 4 -     64179 GG-TT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22374 4 -     24835 GG-TT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39357 4 +     45454 GG-TT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45055 4 +     70886 GG-TT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7180 4 +     30854 GG-TT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31319 4 +     42133 GG-TT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175074 4 -    412891 GG-TT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49129 3 -     65372 GG-T-
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42876 4 +     43593 GG-TT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670889 4 +   5030052 GG-TT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22531 4 -     23494 GG-TT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7667 4 +      8415 GG-TT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14407 4 -     32367 GA-TC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3364 4 -     15198 GG-TT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273119 4 +  21539123 GG-TT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9286 4 +     48076 GG-TT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4423 4 -     28759 GG-TT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31976 4 +     44353 GG-TT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47347 4 -     71267 GG-TT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21406 4 -     33135 GG-TT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4591 4 +     11645 GG-TT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4597 4 -     19611 GG-TT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6311 4 +     28062 GG-TC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41605 4 -     91139 GG-TC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19131 4 +     95584 GG-TC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19044 4 +    119600 GG-TC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8590 4 +     18648 GG-TT
i Callibella_humilis.k141_1233062                        I 83 C 0
s Callithrix_geoffroyi.k119_459277                             196 4 -      8861 GG-TT
i Callithrix_geoffroyi.k119_459277                       N 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452589 4 + 189096842 gg-tt
i Callithrix_jacchus.pat_scaffold_3                      I 756 C 0
s Callithrix_kuhlii.k119_102356                                112 4 +      8664 GG-TT
i Callithrix_kuhlii.k119_102356                          N 0 C 0
s CanFam4.chr16                                           42503772 4 +  60362399 GG-TT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7408 4 -     23171 GG-TT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220751 4 +   9314153 GG-TT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613886 4 +  59632846 GG-TT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105467 4 -  63665305 GG-TT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268671 4 +    496798 GG-TT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3656 4 +      5315 GG-TC
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994344 4 +  23392119 GG-TT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997786 4 +  23407841 GG-TT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60887 4 -     66877 GG-TT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebus_albifrons.Contig27                                  369502 4 -  26074798 GG-TT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6391 4 -     34880 GG-TT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65486 4 -     89041 GG-TT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          595 4 -      5494 GG-TT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490547 4 -  27778364 GG-TT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17380 4 +     27315 GG-TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139085 4 -   4669795 GG-CT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42825 4 +     47900 GG-CT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42658 4 -     44860 GG-CT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42641 4 -    148725 GG-CT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9898 4 -     17524 GG-CT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25620 4 -     34525 GG-CT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30096 4 -     45857 GG-CT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23589 4 +     70610 GG-CT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20514 4 +     36323 GG-CT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11199 4 -     19938 GG-TT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29026 4 -     33796 GG-TT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3542 4 -     15404 GG-TT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7393 4 -     32913 GG-TC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17806 4 -     40346 GG-TC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18061 4 +    216457 GG-TC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17854 4 +     39636 GG-TC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2442 4 +      5346 GG-TT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40940 4 -    112038 GG-TC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6512 4 +     34062 GG-TC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341411 4 +  18827391 GG-CT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7956 4 -     44032 GG-CT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302736 4 - 135778131 GG-CT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10248 4 +     15858 GG-TT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601824 4 -    839153 GG-TT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407172 4 -   2368649 TG-CT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377050 4 - 200372422 GG-CT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                597 4 -     84244 GG-CT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805625 4 +  53390261 GG-TT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1139 4 -      8242 GG-CT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40646 4 -     83289 AG-TT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113112 4 - 224834208 AG-TT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2672 4 +     87169 GG-TT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643143 4 -   1526836 GG-TA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3368 4 +     50838 GG-GT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2233 4 +     36344 GG-TT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108536 5 -   2246927 GGGTT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290962 4 +  12879189 GG-TT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863106 4 -  20541912 GG-CC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662839 4 -   1390856 GG-TT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137624 4 -    198055 GG-TT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96843 4 -    115145 AG-TT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948718 4 -  37912305 AG-TT
i Dipodomys_ordii.KN672350.1                             I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3665 4 -     10735 AG-TT
i Dipodomys_stephensi.DipSte_scaffold_89095              I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8287 4 +     14636 GG-TT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852295 4 - 111700974 TA-GT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4669 4 +     19438 GG-TT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105836 4 -  10337057 GA-TT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29393 4 +    110024 AG-TT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11361 4 +     18970 AG-TT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576736 4 +  14770903 GT-TT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039832 4 -   4378816 GG-TT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373766 4 +  39960074 GG-TT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410552 4 -    498745 GG-TT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260934 4 +  21539334 GG-CT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13134 4 -     24895 GG-TT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40843 4 -     70999 GG-TT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84805 4 +    112731 GG-TT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41378 4 +     68309 GG-TT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51700 4 -     65740 GG-TT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22333 4 -     75513 GG-TT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46526 4 -     97555 GG-TT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3253 4 +     30972 GG-TT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40973 4 -     52037 GG-TT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57377 4 -    111500 GG-TT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245128 4 - 206538554 AG-TT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114914 4 - 205367284 AG-TT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26016 4 -     30238 AG-TT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               5299 4 +      5976 GG-TT
i Galeopterus_variegatus.GalVar_scaffold_132127          I 241 I 152
s Glis_glis.GliGli_scaffold_33859                            32310 4 -     36801 GG-CT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3850 4 -      8343 GG-CC
i Gorilla_beringei.k141_3358147                          C 0 I 8
s Gorilla_gorilla.LT578341.1                                252861 4 - 186649187 GG-CC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11626 4 +     11903 GG-CT
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13061 4 -     40692 GG-TT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34462 4 +     49394 GG-TT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59331 4 -     66874 GG-TT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8204 4 -     42923 GG-TT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15204 4 -     53142 GG-TT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29156 4 -    327341 GG-TT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925427 4 -  22651954 GG-TT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49212 4 +     49977 GG-TT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140849 4 -    630532 GG-CC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67832 4 +     83186 GG-TT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69722 4 +    143317 GG-TT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3884 4 +     12352 GG-CC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11067 4 +     55766 GG-CC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050663 4 + 191637585 GG-CC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799541 4 +  11177569 GG-CC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385142 4 +   7955117 GG-TT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     714 4 +     11955 GG-TT
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237566 4 +   9596543 GG-TT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41661 4 +    110728 GG-TT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60210 4 -     65777 GT-TG
i Lasiurus_borealis.LasBor_scaffold_16567                I 1 C 0
s Lemur_catta.scaffold_24                                 14757852 4 +  30322482 GG-TT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2578 4 -     13097 GG-TT
i Leontocebus_fuscicollis.k141_2994775                   I 262 C 0
s Leontocebus_illigeri.k141_2951200                           2333 4 +      5940 GG-TT
i Leontocebus_illigeri.k141_2951200                      I 66 C 0
s Leontocebus_nigricollis.k141_3905062                        2163 4 -      5717 GG-TT
i Leontocebus_nigricollis.k141_3905062                   I 262 C 0
s Lepilemur_ankaranensis.k141_567626                          7383 4 +     29618 GG-TT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7380 4 +     31569 GG-TT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7391 4 +     24756 GG-TT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7389 4 +     16388 GG-TT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811890 4 -   3914936 GG-TT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16233 4 +     24238 GG-CT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331038 4 -   1826925 GG-CT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39078637 4 +  43346337 GG-TT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613041 4 +  59628241 GG-TT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43355 4 -     61512 GG-CT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371016 4 -  60120075 GG-CT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23271 4 +     30207 GG-CT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20374 4 -     24934 GG-CT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23223 4 +     30527 GG-CT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34412 4 -     50087 GG-CT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44183 4 +     51645 GG-CT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413352 4 - 187317192 GG-CT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397575 4 +  25927173 GG-CT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46739 4 -     62418 GG-CT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23394 4 +     24253 GG-CT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43214 4 +     59329 GG-CT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269142 4 +    668171 GG-CT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20329 4 +     21031 GG-CT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  926 4 +     17132 GG-CT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221632 4 -    270270 GG-TT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320426 4 +  24302211 GG-CT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355258 4 -    752769 GG-CT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671912 4 -    737560 GG-TT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219200 4 +    317179 GG-TT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499367 4 +  40650429 GG-TT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148822 4 +    207569 GG-TT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24383 4 -     74585 GG-TT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47018 4 -    140813 AG-TT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427665 4 +  29670104 AG-TT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8697 4 +     17804 gg-tt
i Mico_argentatus.k141_582562                            I 408 C 0
s Mico_schneideri.k141_1877700                                     17516 4 -     26561 gg-tt
i Mico_schneideri.k141_1877700                                 I 492 C 0
s Microcebus_murinus.CM007674.1                           74982993 4 +  93316391 GG-TT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43387 4 +    145209 TA-GC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183050 4 +    200668 AG-TG
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960788 4 +  27267610 AG-TT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361165 4 -   8254450 GG-TC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40066 4 -     48117 GG-TC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20452 4 -     27822 GG-CT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6901 4 +     27589 GG-TT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50784 4 -     62432 GG-GT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177204 4 +    366855 GG-TT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16909 4 -     63510 GG-TT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37080 4 +     47283 GT-TT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   5094 4 +      5579 AG-TT
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685797 4 + 129401213 AG-TT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39495115 4 + 130317789 AG-TT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80897 4 -     86153 GT-CC
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353535 4 +  14710649 GG-TT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791125 4 +  10118263 GT-TT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385487 4 +   6019432 GT-TT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381307 4 +   4330536 GT-TT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3866 4 +      3929 GT-TT
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117967 4 +    130748 GG-CT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              27031 4 +     34575 GG-CT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467493 4 -  31847680 GG-TT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126014 4 -    149072 GG-TT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51773 4 -    132029 GG-CC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7868 4 -     16345 GG-CC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13753 4 +     22201 GG-CC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_a.k141_941534                                  24151 4 -     54323 GG-CC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196643 4 +   9404916 GG-TT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2549612 4 -   3988456 GT-TA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045874 4 -  11899542 GG-GT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450089 4 +   2017862 GG-TT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91145 4 -    140218 AG-TT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1519 4 -     41509 AA-TT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11755 4 -     14239 AG-TT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102067 4 - 174332312 GG-CT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37680 4 +    559221 GT-TT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_troglodytes.CM009242.2                               1470866 4 - 189151597 GG-CC
i Pan_troglodytes.CM009242.2                             I 10 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22837 4 -    230217 AG-TT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460163 4 -  18783137 AG-TT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970883 4 +   8748460 AG-TT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241266 4 - 183742232 GG-CT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7730 4 +     21308 GG-CT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288769 4 -  20919399 GG-CT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20385 4 -     27687 GG-CT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13521 4 +     16796 GG-CT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20331 4 -     23640 GG-CT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13475 4 +     78924 GG-CT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37962 4 +     38305 AG-TT
i Perognathus_longimembris.PerPac_flattened_line_28053   I 1 C 0
s Peromyscus_maniculatus.KI615324.1                         245237 4 +  18517816 AA-TT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30331 4 -     56120 GA-TT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             547 4 +     55023 GG-CT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             548 4 +     40849 GG-CT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252296 4 +  14605196 GG-CT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1259 4 +     22231 GT-TT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63298 4 +    207309 GG-TC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4392 4 -     25401 GG-TC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30133 4 +     58159 GG-TC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30409 4 +     63561 GG-TC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30172 4 +     51148 GG-TC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555139 4 -   4542175 GG-TC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30156 4 +     51125 GG-TC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6562 4 +     39866 GG-TC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1647 4 -      9282 GG-TC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41051 4 -     87950 GG-TC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41444 4 -     88961 GG-TC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6143 4 -     39403 GG-TC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41095 4 +     87928 GG-TC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6140 4 -     60166 GG-TC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13076 4 -     67232 GG-TC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40992 4 -     90634 GG-TC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42460 4 +     89403 GG-TC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175994 4 - 189387572 GG-CC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190812 4 -   9816681 GG-CC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25645 4 +     69807 GG-CT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42840 4 -     80239 GG-CT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981008 4 +   4620579 GG-TT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564475 4 -   2598838 GG-TT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2111 4 -      7103 GG-TT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2708 4 -     11706 GG-TT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6444 4 -     30655 GG-TT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32769 4 +     46564 GG-TT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93040 4 -     98465 GG-TT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6677 4 +     35169 GG-TT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34556 4 +     52041 AG-TT
i Psammomys_obesus.NESX01036366.1                        I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3100 4 -     18639 GG-TT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839261 4 -  28871421 GG-TT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535828 4 -   4952924 GG-TT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097479 4 +  38429054 AG-TT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25055 4 +     91421 GG-CT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151548 4 -   7812017 GG-CT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5925 4 +     72585 GG-CT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021008 4 -  90668790 AG-TT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913224 4 +   3329780 GG-TT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26865 4 +     27361 GG-CT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120232 4 + 195417433 GG-CT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234473 4 -   7961872 GG-CT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73244 4 -    116970 GG-TT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_midas.LG03                                       389872 4 - 209938924 gg-tt
i Saguinus_midas.LG03                                    I 308 C 0
s Saguinus_oedipus.k141_1466288                               2806 4 -      4301 gg-tt
i Saguinus_oedipus.k141_1466288                          I 202 C 0
s Sapajus_apella.ctg103                                     236721 4 +   5703754 GG-TT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6311 4 +     21866 GG-TT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114417 4 +    313613 GG-TT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23372 4 +     27374 GG-CT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26891 4 +     58920 GG-CT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13387 4 -     45317 GG-CT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21045 4 -     42441 GG-CT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23725 4 -     29113 GG-CT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26794 4 -     48123 GG-CT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47088 4 +     77746 AA-TT
i Sigmodon_hispidus.SigHis_scaffold_20193                I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856745 4 -   1910179 GG-TT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866725 4 +   3870691 GG-TT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4912 4 -     97271 GG-TT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123316 4 +    196729 GG-TT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389310 4 +   1523678 GG-CC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12067 4 +     22964 AG-TT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1088 4 +      5583 GG-CT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190001 4 +    199430 GG-TT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103952 4 -    539355 GG-TT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5310 4 +      6850 GG-TT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5351 4 +     20590 GG-TT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351252 4 - 186847797 GG-CT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22656 4 -     33621 GG-TT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18222 4 -     31044 GG-TT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478110 4 -    610378 GG-TT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18936 4 +     26378 GG-CT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31600 4 -     78344 GG-CT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18257 4 +     25722 GG-CT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26482 4 -     62838 GG-CT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26599 4 +     46913 GG-CT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7405 4 -     28527 GG-CT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28421 4 -     64340 GG-CT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26458 4 -     63452 GG-CT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7901 4 +     22490 GG-CT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1329 4 -      6147 GG-CT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8303 4 -     13050 GG-CT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253542 4 -   6242583 GG-CT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59293 4 +     59866 GG-CT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Ursus_maritimus.KK499267.1                                180251 4 +   5085361 GG-TT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23653 4 -     30710 GG-TT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22560 4 -    147434 GG-TT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103402 4 -    112863 GG-TT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172503 4 -    224448 GG-TT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27287 4 -     86975 GG-TT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1749 4 +      2695 GG-TT
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Perodicticus_potto.k141_1854441                            16752 2 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          24393 2 +     31479 I
e Otolemur_garnettii.GL873799.1                             351112 2 +   1103335 I
e Otolemur_crassicaudatus.k141_649260                        38109 2 -     51505 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562966 2 - 199412804 I
e Nycticebus_coucang.k141_3846325                             1485 2 -      3937 I
e Nycticebus_bengalensis.LG01                             93634727 2 + 196305487 I
e Loris_tardigradus.ctg83                                  5042376 2 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            8715 2 +     19643 I
e Galagoides_demidoff.k141_561628                            18553 2 -     32986 I
e Galago_senegalensis.k141_991736                             6501 2 +     22493 I
e Galago_moholi.ctg3793                                     122956 2 -    137831 I
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822 0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508 0 -   4065304 C
e Enhydra_lutris.KZ291758.1                               24914504 0 +  41312741 C
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_46687                     624 0 -     21056 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Saguinus_mystax.k141_8077960                                2252 81 +      5979 I
e Saguinus_labiatus.k141_2380921                               496 212 -      4390 I
e Saguinus_inustus.k141_2469308                               2304 81 +      5932 I
e Saguinus_imperator.k141_1898058                             2259 184 +      5971 I
e Saguinus_geoffroyi.k141_3779887                             2214 137 +      6077 I
e Saguinus_bicolor.k141_1429097                               2210 246 +     27962 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Pteronotus_parnellii.KE847780.1                            50154 13 -     66298 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Nomascus_siki_b.tarseq_93                            8412025 0 -  22158432 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786 8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mico_humeralifer.k141_1180625                               9073 151 -     12984 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Leontopithecus_rosalia.k141_349454                          9908 12 -     12945 I
e Leontopithecus_chrysomelas.k141_1327670                     8527 12 -     11567 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Cebuella_pygmaea.k141_145798                               41295 291 +     53515 I
e Cebuella_niveiventris.k141_592277                           3397 134 -     12580 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Callimico_goeldii.k141_1609886                              8174 0 -     13885 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3515 8 +     36723 AGTAAGTT
s Acinonyx_jubatus.LLWD01001279.1                           811220 8 +   1699592 AATAGGTT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18461 8 +     63021 CCTAGGTA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413749 8 +  29979442 AGTAGGTT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213860 8 +    347723 AGTAGGTT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16383 7 -     61208 CATAGGA-
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45910 3 +     53615 AG-----T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41849 3 +     44087 AG-----T
i Allochrocebus_lhoesti.k141_441277                      C 0 I 5
s Allochrocebus_preussi.k141_1993939                         14487 3 -     21945 AG-----T
i Allochrocebus_preussi.k141_1993939                     C 0 I 5
s Allochrocebus_solatus.k141_3554717                         16164 3 +     32033 AG-----T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70611 8 -     84148 AGTAGCTT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42844 8 -     78289 AGTAGCTT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42290 8 +     55831 AGTAGCTT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40731 8 -     64179 AGTAGCTT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22378 8 -     24835 AGTAGCTT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39361 8 +     45454 AGTAGCTT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45059 8 +     70886 AGTAGCTT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7184 8 +     30854 AGTAGCTT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31323 8 +     42133 AGTAGCTT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175078 8 -    412891 AGCAGATG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49132 2 -     65372 ------GT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42880 8 +     43593 AGTAGCTT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670893 8 +   5030052 AGTAGCTT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22535 8 -     23494 AGTAGCTT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7671 8 +      8415 AGTAGCTT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14411 8 -     32367 AGTAGGTC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3368 8 -     15198 ACTAGACG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273123 8 +  21539123 AGTAGCTT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9290 8 +     48076 AGTAGCTT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4427 8 -     28759 AGTAGCTT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31980 8 +     44353 AGTAGCTT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47351 8 -     71267 AGTAGCTT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21410 8 -     33135 AGTAGCTT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4595 8 +     11645 TGTAGGTC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4601 8 -     19611 TGTAGGTC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6315 8 +     28062 AGTAGCTT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41609 8 -     91139 AGTAGCTT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19135 8 +     95584 AGTAGCTT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19048 8 +    119600 AGTAGCTT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8594 8 +     18648 AGCAGCTT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callithrix_geoffroyi.k119_459277                             200 8 -      8861 AGCAGCTT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452593 8 + 189096842 agcagctt
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                116 8 +      8664 AGCAGCTT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42503776 8 +  60362399 AGTAAGTT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7412 8 -     23171 AGTAAGTT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220755 8 +   9314153 AGTAAGTT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613890 8 +  59632846 AGTAAGTT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105471 8 -  63665305 AGTAAGTT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268675 8 +    496798 AGTAAGTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3660 8 +      5315 AGCAGACG
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994348 8 +  23392119 AGTAGGTC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997790 8 +  23407841 AGTAGGTC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60891 8 -     66877 AGTAGGTC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebus_albifrons.Contig27                                  369506 8 -  26074798 AGTAGCTT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6395 8 -     34880 AGTAGCTT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65490 8 -     89041 AGTAGCTT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          599 8 -      5494 AGTAAGTC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490551 8 -  27778364 AGCTGGTG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17384 8 +     27315 AGCTGGTG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139089 3 -   4669795 AG-----T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42829 3 +     47900 AG-----T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42662 3 -     44860 AG-----T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42645 3 -    148725 AG-----T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9902 3 -     17524 AG-----T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25624 3 -     34525 AG-----T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30100 3 -     45857 AG-----T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23593 3 +     70610 AG-----T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20518 3 +     36323 AG-----T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11203 8 -     19938 GGTGGGCC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29030 8 -     33796 TGTAGGTC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3546 8 -     15404 TGTAGGTC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7397 8 -     32913 AGTAGCTT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17810 8 -     40346 AGTAGCTT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18065 8 +    216457 AGTAGCTT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17858 8 +     39636 AGTAGCTT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2446 8 +      5346 AGTAGCTT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40944 8 -    112038 AGTAGTTT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6516 8 +     34062 AGTAGTTT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341415 3 +  18827391 AG-----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7960 3 -     44032 AG-----T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302740 3 - 135778131 AG-----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10252 8 +     15858 TGTCAGCC
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 1
s Choloepus_hoffmanni.KN194906.1                            601828 8 -    839153 TGTCAGCC
i Choloepus_hoffmanni.KN194906.1                         C 0 I 1
s Colobus_angolensis.KN981557.1                             407176 8 -   2368649 GGTAGGTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377054 8 - 200372422 GGTAGGTT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                601 8 -     84244 GGTAGGTT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805629 8 +  53390261 AGTAGGTT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1143 8 -      8242 AGCAGGTT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40650 8 -     83289 CATTAGTA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113116 8 - 224834208 CATAGATA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2676 8 +     87169 AATGGGTT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643147 8 -   1526836 AGTAGGTG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3372 8 +     50838 AGTAGGCC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2237 5 +     36344 AGTAG---
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108541 7 -   2246927 TGTAGGC-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290966 8 +  12879189 AGTGGGTC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863110 8 -  20541912 AGTAGACG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662843 8 -   1390856 AGCTGGTT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137628 8 -    198055 AGCTGGTG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96847 8 -    115145 AGTAGGTC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948722 2 -  37912305 GG------
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3669 2 -     10735 GG------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8291 8 +     14636 AGTAGTTC
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852299 8 - 111700974 AGCGGGCC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4673 8 +     19438 AGCAGGTT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105840 8 -  10337057 ACTGGGTC
i Elephantulus_edwardii.JH947257.1                       C 0 N 0
s Ellobius_lutescens.LOEQ01008920.1                          29397 8 +    110024 CATCAGTA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11365 8 +     18970 CATCGGTA
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914504 7 +  41312741 -GTAGGTT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576740 7 +  14770903 AGTA-GCT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039836 8 -   4378816 AGCGGGTT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373770 8 +  39960074 AGCGGGTT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410556 8 -    498745 AGCGGGTT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260938 3 +  21539334 AG-----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13138 8 -     24895 TGTAGGTC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40847 8 -     70999 TGCAGGTC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84809 8 +    112731 TGTAGGTC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41382 8 +     68309 TGTAGGTC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51704 8 -     65740 TGTAGGTC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22337 8 -     75513 TGTAGGTC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46530 8 -     97555 TGTAGGTC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3257 8 +     30972 TGTAGGTC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40977 8 -     52037 TGTAGGTC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57381 8 -    111500 TGTAGGTC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245132 8 - 206538554 AATAGGTT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114918 8 - 205367284 AATAGGTT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26020 8 -     30238 AATAGGTT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17449 8 +     18121 AGTAGGCT
i Galeopterus_variegatus.GalVar_scaffold_74466           I 4 C 0
s Glis_glis.GliGli_scaffold_33859                            32314 8 -     36801 AGTAGCTC
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_668773                                 807 8 -      1303 AGTAAGTT
i Gorilla_beringei.k141_668773                           I 285 I 4
s Gorilla_gorilla.LT578341.1                                252865 8 - 186649187 AGTAAGTT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11630 8 +     11903 AGTAGTTC
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13065 8 -     40692 TGTAGGTC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34466 8 +     49394 TGTAGGTC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59335 8 -     66874 TGTAGGTC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8208 8 -     42923 TGTAGGTC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15208 8 -     53142 TGTAGGTC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29160 8 -    327341 AATAGGTT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925431 8 -  22651954 AGTAGGTC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49216 8 +     49977 AGTAGGGT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140853 8 -    630532 AGTAGGTT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67836 8 +     83186 AATAGGTT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69726 8 +    143317 AGTAGGTC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3888 8 +     12352 AGTAGGTT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11071 8 +     55766 AGTAGGTT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050667 8 + 191637585 AGTAGGTT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799545 8 +  11177569 AGTAGGTT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385146 8 +   7955117 ACTAGTTC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     718 8 +     11955 TGTAGGTC
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237570 8 +   9596543 AGTAGGAA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41665 8 +    110728 AGTAGCTT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60214 7 -     65777 AGTA-GCT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757856 8 +  30322482 TGTAGGTC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2582 8 -     13097 AGTAGCTT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2337 8 +      5940 AGTAGCTT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2167 8 -      5717 AGTAGCTT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7387 8 +     29618 TGTAGGTC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7384 8 +     31569 TGTAGGTC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7395 8 +     24756 TGTAGGTC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7393 8 +     16388 TGTAGGTC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811894 8 -   3914936 AGTAGGTT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16237 7 +     24238 -GTGGGTT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331042 3 -   1826925 AG-----T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39078641 8 +  43346337 AGTGAGTC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613045 8 +  59628241 AGTAAGTT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43359 3 -     61512 AG-----T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371020 3 -  60120075 AG-----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23275 3 +     30207 AG-----T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20378 3 -     24934 AG-----T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23227 3 +     30527 AG-----T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34416 3 -     50087 AG-----T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44187 3 +     51645 AG-----T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413356 3 - 187317192 AG-----T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397579 3 +  25927173 AG-----T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46743 3 -     62418 AG-----T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23398 3 +     24253 AG-----T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43218 3 +     59329 AG-----T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269146 3 +    668171 AG-----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20333 3 +     21031 AG-----T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  930 3 +     17132 AG-----T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221636 8 -    270270 AGTAGGTT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320430 3 +  24302211 AG-----T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355262 3 -    752769 AG-----T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671916 8 -    737560 AGTAGGTT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219204 8 +    317179 AGTAGGTT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499371 8 +  40650429 ACTAGTTC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148826 8 +    207569 AGCAGGTT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24387 8 -     74585 AGTAGTTT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47022 8 -    140813 TGTAGGTA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427669 8 +  29670104 CATAGATA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8701 8 +     17804 agcagctt
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_schneideri.k141_1877700                                     17520 8 -     26561 agcagctt
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74982997 8 +  93316391 TGTAGGTC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43391 8 +    145209 AGTGGGCC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183054 8 +    200668 AGTAGATG
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960792 6 +  27267610 CGTAGG--
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361169 8 -   8254450 AGTAGGCT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40070 8 -     48117 AGTAGGCT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20456 3 -     27822 AG-----T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6905 8 +     27589 AGTAGGTT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50788 8 -     62432 TGTAGGTC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177208 8 +    366855 AGGAGGCT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16913 8 -     63510 AATAGGTT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37084 6 +     47283 AGTG-GC-
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   5098 8 +      5579 TGAAGGTA
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685801 8 + 129401213 CAAAGGTA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39495119 8 + 130317789 CAAAGGTA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80901 7 -     86153 A-TAGTGC
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353539 8 +  14710649 AGTAGGTT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791129 6 +  10118263 AGTA-GC-
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385491 6 +   6019432 AGTA-GC-
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381311 6 +   4330536 AGTA-GC-
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3870 6 +      3929 AGTA-GC-
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117971 8 +    130748 TGTTGGCC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 1
s Nasalis_larvatus.k141_1350636                              27035 8 +     34575 GGTAGGCT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467497 8 -  31847680 AGTAGGTT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126018 8 -    149072 GGTAGGCT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51777 8 -    132029 AGTAGGTT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7872 8 -     16345 AGTAGGTT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13757 8 +     22201 AGTAGGTT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_a.k141_941534                                  24155 8 -     54323 AGTAGGTT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196647 8 +   9404916 AGTAAGTT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2549616 7 -   3988456 -GTGAGTT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045878 8 -  11899542 AGTAAGTC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450093 8 +   2017862 AGTAGGCT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91149 8 -    140218 CATAGGTA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1523 8 -     41509 CCTAGGTA
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11759 8 -     14239 GGTATGCT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102071 7 - 174332312 -GTGGGTT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37684 8 +    559221 AGTAAGTT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_troglodytes.CM009242.2                               1470870 8 - 189151597 AGTAAGTT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22841 8 -    230217 AATAGGTT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460167 8 -  18783137 AATAGGTT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970887 8 +   8748460 AATAGGTT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241270 3 - 183742232 AG-----T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7734 3 +     21308 AG-----T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288773 3 -  20919399 AG-----T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20389 3 -     27687 AG-----T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13525 3 +     16796 AG-----T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20335 3 -     23640 AG-----T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13479 8 +     78924 AATTGGTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37966 2 +     38305 AG------
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245241 8 +  18517816 CCTAGGTA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30335 8 -     56120 ATTAGATT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             551 8 +     55023 GGTAGGCT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             552 8 +     40849 GGTAGGCT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252300 8 +  14605196 GGTAGGCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1263 7 +     22231 AGAA-GCT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63302 8 +    207309 AGTAGCTG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4396 8 -     25401 AGTAGCTG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30137 8 +     58159 AGTAGCTG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30413 8 +     63561 AGTAGCTG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30176 8 +     51148 AGTAGCTG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555143 8 -   4542175 AGTAGCTG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30160 8 +     51125 AGTAGCTG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6566 8 +     39866 AGTAGCTT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1651 8 -      9282 AGTAGCTT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41055 8 -     87950 AGTAGCTT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41448 8 -     88961 AGTAGCTT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6147 8 -     39403 AGTAGCTT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41099 8 +     87928 AGTAGCTT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6144 8 -     60166 AGTAGCTT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13080 8 -     67232 AGTAGCTT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          40996 8 -     90634 AGTAGCTT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42464 8 +     89403 AGTAGCTT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   175998 8 - 189387572 AGTAGGTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190816 8 -   9816681 AGTAGGTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25649 8 +     69807 GGTAGGCT
i Presbytis_comata.k141_1230337                          C 0 I 35
s Presbytis_mitrata.k141_584736                              42844 8 -     80239 GGTAGGCT
i Presbytis_mitrata.k141_584736                          C 0 I 35
s Prolemur_simus.MPIZ01000396.1                            1981012 8 +   4620579 TGTAGGTC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564479 8 -   2598838 TGTAGGTC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2115 8 -      7103 TGTAGGTC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2712 8 -     11706 TGTAGGTC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6448 8 -     30655 TGTAGGTC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32773 8 +     46564 TGTAGGTC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93044 8 -     98465 TGTAGGTC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6681 8 +     35169 TGTAGGTC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34560 8 +     52041 TGTAGGTA
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3104 8 -     18639 AATAGGTT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839265 8 -  28871421 AGCAGGTT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535832 8 -   4952924 AGCAGGTT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097483 8 +  38429054 AATAGGTT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25059 8 +     91421 GGTCGGCT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151552 8 -   7812017 GGTCGGCT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5929 8 +     72585 GGTCGGCT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021012 8 -  90668790 CTAAGGTA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913228 8 +   3329780 AGTAGGGT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26869 8 +     27361 GGTAGGCT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120236 8 + 195417433 GGTAGGCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234477 8 -   7961872 GGTAGGCT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73248 8 -    116970 AGCAGGTT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_midas.LG03                                       389876 8 - 209938924 agtagctt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_oedipus.k141_1466288                               2810 8 -      4301 agtacttt
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236725 8 +   5703754 AGTAGCTT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6315 8 +     21866 AGTAGCTT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114421 8 +    313613 AGTAGGTT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23376 8 +     27374 GGTCGGCT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26895 8 +     58920 GGTCGGCT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13391 8 -     45317 GGTCGGCT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21049 8 -     42441 GGTCGGCT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23729 8 -     29113 GGTCGGCT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26798 8 -     48123 GGTCGGCT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47092 8 +     77746 CATTAGTA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856749 8 -   1910179 AGTCGGTT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866729 8 +   3870691 ACTAGTTC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4916 8 -     97271 AGTAGGTT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123320 8 +    196729 AATAGGTT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389314 8 +   1523678 AGTAGGTT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12071 8 +     22964 AGTAGGCT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1092 8 +      5583 TATTGGCC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_7432                      190005 8 +    199430 AGCTGGTT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103956 8 -    539355 AGCTGGTT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5314 8 +      6850 AGTAAGTT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5355 8 +     20590 AGTAAGTT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351256 3 - 186847797 AG-----T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22660 8 -     33621 ATTTGATC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18226 8 -     31044 AGTAGGCC
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478114 8 -    610378 AGTAGACA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18940 8 +     26378 GGTCGGCT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31604 8 -     78344 GGTCGGCT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18261 8 +     25722 GGTCGGCT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26486 8 -     62838 GGTCGGCT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26603 8 +     46913 GGTCGGCT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7409 8 -     28527 GGTCGGCT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28425 8 -     64340 GGTCGGCT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26462 8 -     63452 GGTCGGCT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7905 8 +     22490 GGTCGGCT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1333 8 -      6147 GGTCGGCT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8307 8 -     13050 GGTCGGCT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253546 8 -   6242583 GGTCGGCT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59297 8 +     59866 GGTCGGCT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     624 8 -     21056 AGTAGGTG
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180255 8 +   5085361 AGTAGGTT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23657 8 -     30710 TGTAGGTC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22564 8 -    147434 TGTAGGTC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103406 8 -    112863 AGTAAGTT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172507 8 -    224448 AGTAGGTT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27291 8 -     86975 AGTAGGTT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1753 8 +      2695 AGTAGGGA
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Perodicticus_potto.k141_1854441                            16752 2 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          24393 2 +     31479 I
e Otolemur_garnettii.GL873799.1                             351112 2 +   1103335 I
e Otolemur_crassicaudatus.k141_649260                        38109 2 -     51505 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562966 2 - 199412804 I
e Nycticebus_coucang.k141_3846325                             1485 2 -      3937 I
e Nycticebus_bengalensis.LG01                             93634727 2 + 196305487 I
e Loris_tardigradus.ctg83                                  5042376 2 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            8715 2 +     19643 I
e Galagoides_demidoff.k141_561628                            18553 2 -     32986 I
e Galago_senegalensis.k141_991736                             6501 2 +     22493 I
e Galago_moholi.ctg3793                                     122956 2 -    137831 I
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822 0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508 0 -   4065304 C
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Saguinus_mystax.k141_8077960                                2252 81 +      5979 I
e Saguinus_labiatus.k141_2380921                               496 212 -      4390 I
e Saguinus_inustus.k141_2469308                               2304 81 +      5932 I
e Saguinus_imperator.k141_1898058                             2259 184 +      5971 I
e Saguinus_geoffroyi.k141_3779887                             2214 137 +      6077 I
e Saguinus_bicolor.k141_1429097                               2210 246 +     27962 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Pteronotus_parnellii.KE847780.1                            50154 13 -     66298 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Nomascus_siki_b.tarseq_93                            8412025 0 -  22158432 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786 8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mico_humeralifer.k141_1180625                               9073 151 -     12984 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Leontopithecus_rosalia.k141_349454                          9908 12 -     12945 I
e Leontopithecus_chrysomelas.k141_1327670                     8527 12 -     11567 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Cebuella_pygmaea.k141_145798                               41295 291 +     53515 I
e Cebuella_niveiventris.k141_592277                           3397 134 -     12580 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Callimico_goeldii.k141_1609886                              8174 0 -     13885 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3523  4 +     36723 G--T----------CG
s Acinonyx_jubatus.LLWD01001279.1                           811228  4 +   1699592 G--T----------AA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18469  4 +     63021 G--C----------AA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413757  3 +  29979442 G--G-----------G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213868  4 +    347723 G--G----------AG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16390  4 -     61208 A--C----------AA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45913  4 +     53615 G--T----------CA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41857  4 +     44087 G--T----------CA
i Allochrocebus_lhoesti.k141_441277                      I 5 C 0
s Allochrocebus_preussi.k141_1993939                         14495  4 -     21945 G--T----------CA
i Allochrocebus_preussi.k141_1993939                     I 5 C 0
s Allochrocebus_solatus.k141_3554717                         16167  4 +     32033 G--T----------CA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70619  4 -     84148 G--T----------AG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42852  4 -     78289 G--T----------AG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42298  4 +     55831 G--T----------AG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40739  4 -     64179 G--T----------AG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22386  4 -     24835 G--T----------AG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39369  4 +     45454 G--T----------AG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45067  4 +     70886 G--T----------AG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7192  4 +     30854 G--T----------AG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31331  4 +     42133 G--T----------AG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175086  4 -    412891 G--T----------AA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49134  4 -     65372 G--C----------TG
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42888  4 +     43593 G--T----------AG
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670901  4 +   5030052 G--T----------AG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22543  4 -     23494 G--T----------AG
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7679  4 +      8415 G--T----------AG
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14419  4 -     32367 A--C----------TG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3376  4 -     15198 G--T----------AA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273131  4 +  21539123 G--T----------AG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9298  4 +     48076 G--T----------AG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4435  4 -     28759 G--T----------AG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31988  4 +     44353 G--T----------AG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47359  4 -     71267 G--T----------AG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21418  4 -     33135 G--T----------AG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4603  4 +     11645 T--T----------GA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4609  4 -     19611 A--T----------GA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6323  4 +     28062 G--T----------AG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41617  4 -     91139 G--T----------AG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19143  4 +     95584 G--T----------AG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19056  4 +    119600 G--T----------AG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8602  4 +     18648 G--T----------AG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callithrix_geoffroyi.k119_459277                             208  4 -      8861 G--T----------AG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452601  4 + 189096842 g--t----------ag
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                124  4 +      8664 G--T----------AG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42503784  4 +  60362399 G--G----------AG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7420  4 -     23171 G--G----------AG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220763  4 +   9314153 G--G----------AG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613898  4 +  59632846 G--G----------AG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105479  4 -  63665305 G--G----------AG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268683  4 +    496798 G--T----------AA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3668  4 +      5315 G--T----------GA
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994356  4 +  23392119 A--T----------GA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997798  4 +  23407841 A--T----------GA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60899  4 -     66877 A--T----------GA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebus_albifrons.Contig27                                  369514  4 -  26074798 G--T----------AG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6403  4 -     34880 G--T----------AG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65498  4 -     89041 G--T----------AG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          607  4 -      5494 A--T----------AA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490559  4 -  27778364 G--T----------GA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17392  4 +     27315 G--T----------GA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139092  4 -   4669795 G--T----------CA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42832  4 +     47900 G--T----------CA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42665  4 -     44860 G--T----------CA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42648  4 -    148725 G--T----------CA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9905  4 -     17524 G--T----------CA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25627  4 -     34525 G--T----------CA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30103  4 -     45857 G--T----------CA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23596  4 +     70610 G--T----------CA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20521  4 +     36323 G--T----------CA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11211  4 -     19938 C--A----------GA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29038  4 -     33796 A--T----------GA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3554  4 -     15404 A--T----------GA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7405  4 -     32913 G--T----------AG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17818  4 -     40346 G--T----------AG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18073  4 +    216457 G--T----------AG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17866  4 +     39636 G--T----------AG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2454  4 +      5346 G--T----------AG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40952  4 -    112038 G--T----------AG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6524  4 +     34062 G--T----------AG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341418  4 +  18827391 G--T----------CA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7963  4 -     44032 G--T----------CA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302743  4 - 135778131 G--T----------CA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10261  2 +     15858 --------------AA
i Choloepus_didactylus.ChoDid_scaffold_70559             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            601837  2 -    839153 --------------AA
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                             407184  4 -   2368649 G--T----------CA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377062  4 - 200372422 G--T----------CA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                609  4 -     84244 G--T----------CA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805637  4 +  53390261 G--G----------AA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1151  4 -      8242 G--T----------AA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40658  4 -     83289 G--C----------AA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113124  4 - 224834208 G--C----------AA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2684  4 +     87169 G--T----------AA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643155  4 -   1526836 A--C----------AG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3380  4 +     50838 A--C----------TG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108548  4 -   2246927 T--A----------GA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290974  4 +  12879189 G--C----------AA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863118  4 -  20541912 G--C----------AA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662851  4 -   1390856 G--T----------GA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137636  4 -    198055 G--T----------GA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96855  4 -    115145 A--C----------AA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8299  4 +     14636 A--C----------AA
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852307  4 - 111700974 T--T----------GA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4681  4 +     19438 G--T----------AT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         7814917  2 -  10337057 --------------AG
i Elephantulus_edwardii.JH947257.1                       N 0 N 0
s Ellobius_lutescens.LOEQ01008920.1                          29405  4 +    110024 G--T----------GA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11373  4 +     18970 G--T----------GA
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914511  4 +  41312741 G--G----------AG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576747  4 +  14770903 A--T----------AA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039844  4 -   4378816 G--T----------AA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373778  4 +  39960074 G--T----------AA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410564  4 -    498745 G--T----------AA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260941  4 +  21539334 G--T----------CA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13146  4 -     24895 A--T----------GA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40855  4 -     70999 A--T----------GA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84817  4 +    112731 A--T----------GA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41390  4 +     68309 A--T----------GA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51712  4 -     65740 A--T----------GA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22345  4 -     75513 A--T----------GA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46538  4 -     97555 A--T----------GA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3265  4 +     30972 A--T----------GA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40985  4 -     52037 A--T----------GA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57389  4 -    111500 A--T----------GA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245140  4 - 206538554 G--T----------AA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114926  4 - 205367284 G--T----------AA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26028  4 -     30238 G--T----------AA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17457  4 +     18121 G--T----------AA
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32322  4 -     36801 C--C----------AG
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3862  4 -      8343 G--T----------CG
i Gorilla_beringei.k141_3358147                          I 8 I 116
s Gorilla_gorilla.LT578341.1                                252873  4 - 186649187 G--T----------TG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11638  4 +     11903 T--C----------AG
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13073  4 -     40692 A--T----------GA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34474  4 +     49394 A--T----------GA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59343  4 -     66874 A--T----------GA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8216  4 -     42923 A--T----------GA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15216  4 -     53142 A--T----------GA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29168  4 -    327341 G--T----------AG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925439  6 -  22651954 ACAC----------AA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49224  4 +     49977 G--T----------AA
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140861  4 -    630532 G--T----------CA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67844  4 +     83186 G--T----------AA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69734  4 +    143317 A--C----------AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3896  4 +     12352 G--T----------CA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11079  4 +     55766 G--T----------CA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050675  4 + 191637585 G--T----------CA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799553  4 +  11177569 G--T----------CA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385154  5 +   7955117 AC-T----------AG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     726  4 +     11955 A--T----------GA
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237578  4 +   9596543 A--C----------AA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41673  4 +    110728 G--T----------AG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60221  4 -     65777 G--T----------AA
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757864  4 +  30322482 A--T----------GA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2590  4 -     13097 G--T----------AG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2345  4 +      5940 G--T----------AG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2175  4 -      5717 G--T----------AG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8539  4 -     11567 G--T----------AG
i Leontopithecus_chrysomelas.k141_1327670                I 12 C 0
s Leontopithecus_rosalia.k141_349454                          9920  4 -     12945 G--T----------AG
i Leontopithecus_rosalia.k141_349454                     I 12 C 0
s Lepilemur_ankaranensis.k141_567626                          7395  4 +     29618 T--T----------GA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7392  4 +     31569 T--T----------GA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7403  4 +     24756 T--T----------GA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7401  4 +     16388 T--T----------GA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811902  4 -   3914936 G--G----------AG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16244  4 +     24238 G--T----------AA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331045  4 -   1826925 G--T----------CA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39078649  4 +  43346337 T--T----------GA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613053  4 +  59628241 G--G----------AG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43362  4 -     61512 G--T----------CA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371023  4 -  60120075 G--T----------CA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23278  4 +     30207 G--T----------CA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20381  4 -     24934 G--T----------CA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23230  4 +     30527 G--T----------CA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34419  4 -     50087 G--T----------CA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44190  4 +     51645 G--T----------CA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413359  4 - 187317192 G--T----------CA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397582  4 +  25927173 G--T----------CA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46746  4 -     62418 G--T----------CA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23401  4 +     24253 G--T----------CA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43221  4 +     59329 G--T----------CA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269149  4 +    668171 G--T----------CA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20336  4 +     21031 G--T----------CA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  933  4 +     17132 G--T----------CA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221644  4 -    270270 G--T----------AA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320433  4 +  24302211 G--T----------CA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355265  4 -    752769 G--T----------CA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671924  4 -    737560 G--T----------AA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219212  4 +    317179 G--T----------AA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499379  5 +  40650429 AC-T----------AG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148834  4 +    207569 G--T----------AA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24395  4 -     74585 G--G----------AG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47030  4 -    140813 G--C----------AA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427677  4 +  29670104 G--C----------AA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8709  4 +     17804 g--t----------ag
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_schneideri.k141_1877700                                     17528  4 -     26561 g--t----------ag
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983005  4 +  93316391 A--T----------GA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43399  4 +    145209 T--T----------GA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183062  4 +    200668 G--T----------AA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960798  3 +  27267610 ---A----------GA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361177  4 -   8254450 G--C----------AA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40078  4 -     48117 G--C----------AA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20459  4 -     27822 G--T----------CA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6913  4 +     27589 G--G----------AG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50796  4 -     62432 A--T----------GA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177216  4 +    366855 G--T----------AA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16921  4 -     63510 G--T----------AA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37090  4 +     47283 G--T----------GA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   5106  4 +      5579 G--C----------AA
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685809  4 + 129401213 G--C----------AA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39495127  4 + 130317789 G--C----------AA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             80908  4 -     86153 C--C----------AG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353547  4 +  14710649 G--G----------AG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791135  4 +  10118263 G--T----------AA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385497  4 +   6019432 A--T----------AA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381317  4 +   4330536 G--T----------AA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3876  4 +      3929 G--T----------AA
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117980  2 +    130748 --------------GA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 1 C 0
s Nasalis_larvatus.k141_1350636                              27043  4 +     34575 G--T----------CA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467505  4 -  31847680 G--G----------AG
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126026  4 -    149072 G--T----------AA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51785  4 -    132029 G--T----------CA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7880  4 -     16345 G--T----------CA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13765  4 +     22201 G--T----------CA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_a.k141_941534                                  24163  4 -     54323 G--T----------CA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196655  4 +   9404916 G--G----------AG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2549623  4 -   3988456 G--T----------AA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045886  4 -  11899542 A--T----------AA
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450101  4 +   2017862 G--G----------AG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91157  4 -    140218 G--C----------GA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1531  4 -     41509 G--C----------AG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11767  4 -     14239 T--T----------GA
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102078  4 - 174332312 G--T----------AA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37692  4 +    559221 G--G----------AG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_troglodytes.CM009242.2                               1470878  4 - 189151597 G--T----------CG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22849  4 -    230217 G--T----------GA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460175  4 -  18783137 G--T----------GA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970895  4 +   8748460 G--T----------AA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241273  4 - 183742232 G--T----------CA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7737  4 +     21308 G--T----------CA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288776  4 -  20919399 G--T----------CA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20392  4 -     27687 G--T----------CA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13528  4 +     16796 G--T----------CA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20338  4 -     23640 G--T----------CA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13487  4 +     78924 G--T----------AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245249  4 +  18517816 G--C----------AG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30343  4 -     56120 G--T----------AG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             559  4 +     55023 G--T----------CA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             560  4 +     40849 G--T----------CA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252308  4 +  14605196 G--T----------CA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1270  4 +     22231 G--T----------AA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63310  4 +    207309 G--T----------AG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4404  4 -     25401 G--T----------AG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30145  4 +     58159 G--T----------AG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30421  4 +     63561 G--T----------AG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30184  4 +     51148 G--T----------AG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555151  4 -   4542175 G--T----------AG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30168  4 +     51125 G--T----------AG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6574  4 +     39866 G--C----------AG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1659  4 -      9282 G--C----------AG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41063  4 -     87950 G--C----------AG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41456  4 -     88961 G--C----------AG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6155  4 -     39403 G--C----------AG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41107  4 +     87928 G--C----------AG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6152  4 -     60166 G--C----------AG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13088  4 -     67232 G--C----------AG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41004  4 -     90634 G--C----------AG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42472  4 +     89403 G--C----------AG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176006  4 - 189387572 G--T----------CG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190824  4 -   9816681 G--T----------CG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25692  4 +     69807 G--T----------CA
i Presbytis_comata.k141_1230337                          I 35 C 0
s Presbytis_mitrata.k141_584736                              42887  4 -     80239 G--T----------CA
i Presbytis_mitrata.k141_584736                          I 35 C 0
s Prolemur_simus.MPIZ01000396.1                            1981020  4 +   4620579 A--T----------GA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564487  4 -   2598838 A--T----------GA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2123  4 -      7103 A--T----------GA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2720  4 -     11706 A--T----------GA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6456  4 -     30655 A--T----------GA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32781  4 +     46564 A--T----------GA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93052  4 -     98465 A--T----------GA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6689  4 +     35169 A--T----------GA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34568  4 +     52041 G--C----------AA
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3112  4 -     18639 G--G----------AG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839273  4 -  28871421 G--T----------AA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535840  4 -   4952924 G--T----------AA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097491  4 +  38429054 G--T----------AA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25067  4 +     91421 G--T----------CA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151560  4 -   7812017 G--T----------CA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5937  4 +     72585 G--T----------CA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021020  4 -  90668790 G--C----------AA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913236  5 +   3329780 G-TT----------AA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26877  4 +     27361 G--T----------CA
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120244  4 + 195417433 G--T----------CA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234485  4 -   7961872 G--C----------CA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73256  4 -    116970 A--T----------AA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_midas.LG03                                       389884 14 - 209938924 g--tggttactcaggg
i Saguinus_midas.LG03                                    C 0 I 242
s Saguinus_oedipus.k141_1466288                               2818 14 -      4301 g--cggttagtcaggg
i Saguinus_oedipus.k141_1466288                          C 0 I 242
s Sapajus_apella.ctg103                                     236733  4 +   5703754 G--T----------AG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6323  4 +     21866 G--T----------AG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114429  4 +    313613 G--G----------AA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23384  4 +     27374 G--T----------CA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26903  4 +     58920 G--T----------CA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13399  4 -     45317 G--T----------CA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21057  4 -     42441 G--T----------CA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23737  4 -     29113 G--T----------CA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26806  4 -     48123 G--T----------CA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47100  4 +     77746 G--T----------GA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856757  4 -   1910179 G--T----------AG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866737  5 +   3870691 AC-T----------AG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123328  4 +    196729 G--T----------AG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389322  4 +   1523678 G--T----------CG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12079  4 +     22964 G--T----------AA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1101  2 +      5583 --------------GA
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 1 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190013  4 +    199430 G--T----------AA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103964  4 -    539355 G--T----------AA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5322  4 +      6850 G--T----------AA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5363  4 +     20590 G--T----------AA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351259  4 - 186847797 G--T----------CA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22668  4 -     33621 A--C----------AA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18234  4 -     31044 C--A----------GA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478122  4 -    610378 G--T----------GA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18948  4 +     26378 G--T----------CA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31612  4 -     78344 G--T----------CA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18269  4 +     25722 G--T----------CA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26494  4 -     62838 G--T----------CA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26611  4 +     46913 G--T----------CA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7417  4 -     28527 G--T----------CA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28433  4 -     64340 G--T----------CA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26470  4 -     63452 G--T----------CA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     7913  4 +     22490 G--T----------CA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1341  4 -      6147 G--T----------CA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8315  4 -     13050 G--T----------CA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253554  4 -   6242583 G--T----------CA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59305  4 +     59866 G--T----------CA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     632  4 -     21056 A--A----------AA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180263  3 +   5085361 G--G-----------G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23665  4 -     30710 A--T----------GA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22572  4 -    147434 A--T----------GA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103414  4 -    112863 G--G----------AG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172515  5 -    224448 AC-A----------AG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27299  4 -     86975 G--G----------AG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1761  4 +      2695 G--C----------AA
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_28053       37968  0 +     38305 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   3671  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948724  0 -  37912305 C
e Cuniculus_paca.CunPac_flattened_line_7025                   2242  0 +     36344 C
e Perodicticus_potto.k141_1854441                            16752  2 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          24393  2 +     31479 I
e Otolemur_garnettii.GL873799.1                             351112  2 +   1103335 I
e Otolemur_crassicaudatus.k141_649260                        38109  2 -     51505 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562966  2 - 199412804 I
e Nycticebus_coucang.k141_3846325                             1485  2 -      3937 I
e Nycticebus_bengalensis.LG01                             93634727  2 + 196305487 I
e Loris_tardigradus.ctg83                                  5042376  2 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            8715  2 +     19643 I
e Galagoides_demidoff.k141_561628                            18553  2 -     32986 I
e Galago_senegalensis.k141_991736                             6501  2 +     22493 I
e Galago_moholi.ctg3793                                     122956  2 -    137831 I
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508  0 -   4065304 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              4924  0 -     97271 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Saguinus_mystax.k141_8077960                                2252 81 +      5979 I
e Saguinus_labiatus.k141_2380921                               496 212 -      4390 I
e Saguinus_inustus.k141_2469308                               2304 81 +      5932 I
e Saguinus_imperator.k141_1898058                             2259 184 +      5971 I
e Saguinus_geoffroyi.k141_3779887                             2214 137 +      6077 I
e Saguinus_bicolor.k141_1429097                               2210 246 +     27962 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Pteronotus_parnellii.KE847780.1                            50154 13 -     66298 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Nomascus_siki_b.tarseq_93                            8412025  0 -  22158432 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786  8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mico_humeralifer.k141_1180625                               9073 151 -     12984 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Cebuella_pygmaea.k141_145798                               41295 291 +     53515 I
e Cebuella_niveiventris.k141_592277                           3397 134 -     12580 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callimico_goeldii.k141_1609886                              8174  0 -     13885 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3527 25 +     36723 T-G---GAGCACCCA-G--AGTGGACACTT-CA
s Acinonyx_jubatus.LLWD01001279.1                           811232 21 +   1699592 T-G---GGTTA-----G--AGTCAGTGCTT-AG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18473  9 +     63021 CAA----AGTA-----T--A-------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 5
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413760 21 +  29979442 T-G---GGTCA-----G--AACGGGTGCTT-AG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213872 21 +    347723 T-T---GGTCA-----G--AATGGGTGCTT-AT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16394 10 -     61208 T-G-G--GGCA-----G--A------------G
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45917 24 +     53615 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41861 24 +     44087 T-G---GG-TGCCCA-G--AGTGGCCACTT-CG
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14499 24 -     21945 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16171 24 +     32033 T-G---GG-TGCCCA-G--GGTGGCCACTT-CG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70623 25 -     84148 T-G---GGGCACCCA-G--AGTGGACACTT-AC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42856 25 -     78289 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42302 25 +     55831 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40743 25 -     64179 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22390 25 -     24835 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39373 25 +     45454 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45071 25 +     70886 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7196 25 +     30854 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31335 25 +     42133 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175090 21 -    412891 T-G---GGTCA-----G--AGTTGGTGCAT-AG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49138 25 -     65372 G-G---GGGCACCCA-G--AGTGGACACTT-AG
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42892 25 +     43593 T-G---GGGCACCCA-G--AGCGGACACTT-AG
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670905 25 +   5030052 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22547 25 -     23494 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7683 25 +      8415 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14424 18 -     32367 -------GATA-----G--TCTAGGAATTT-AT
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3380 21 -     15198 T-G---GGTCA-----G--GGTTGGTGCCT-AG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273135 25 +  21539123 C-G---GGGCACCCA-G--AGTGGACACTT-AG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9302 24 +     48076 C-G---GG-CACCCA-G--AGTGGACACTT-AG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4439 24 -     28759 C-G---GG-CACCCA-G--AGTGGACACTT-AG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              31992 25 +     44353 C-G---GGGCACCCA-G--AGTGGACACTT-AG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47363 24 -     71267 C-G---GG-CACCCA-G--AGTGGACACTT-AG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21422 25 -     33135 C-G---GGGCACCCA-G--AGTGGACACTT-AG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4607 20 +     11645 T-G---GGGTG-----G--CGTGAGTA-CT-AG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4613 20 -     19611 T-G---GGGTG-----G--CGTGAGTA-CT-AG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6327 25 +     28062 T-G---GGACACCCA-G--AGTGGACACTT-AG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41621 25 -     91139 T-G---GGACACCCA-G--AGTGGACACTT-AG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19147 25 +     95584 T-G---GGACACCCA-G--AGTGGACACTT-AG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19060 25 +    119600 T-G---GGACACCCA-G--AGTGGACACTT-AG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8606 25 +     18648 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callithrix_geoffroyi.k119_459277                             212 25 -      8861 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452605 25 + 189096842 t-g---gggcaCCCA-G--AGTGGACACTT-AG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                128 25 +      8664 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42503788 21 +  60362399 T-G---GGTCA-----G--AATGAGTGCTT-AG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7424 21 -     23171 T-G---GGTCA-----G--AATGAGTGCTT-AG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220767 21 +   9314153 T-G---GGTCA-----G--AATGAGTGCTT-AG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613902 21 +  59632846 T-G---GGTCA-----G--AATGAGTGCTT-AG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105483 21 -  63665305 T-G---GGTCA-----G--AATGAGTGCTT-AG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268687 21 +    496798 T-G---GGGTA-----G--AGTGAGCACTT-AC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3672 21 +      5315 T-G---ACTCA-----G--GGCTGGTGCCT-AG
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994360 21 +  23392119 CAG----GTCA-----G--TGTGGGCACTT-AC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997802 21 +  23407841 CAG----GTCA-----G--TGCGGGCACTT-AC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60903 21 -     66877 CAG----GTCA-----G--TGCGGGCACTT-AC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3531 19 -     12580 ----------ACCCA-G--AGTGGACACTT-AG
i Cebuella_niveiventris.k141_592277                      I 134 C 0
s Cebuella_pygmaea.k141_145798                               41586 19 +     53515 ----------ACCCA-G--AGTGGACACTT-AG
i Cebuella_pygmaea.k141_145798                           I 291 C 0
s Cebus_albifrons.Contig27                                  369518 25 -  26074798 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6407 25 -     34880 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65502 25 -     89041 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          611 21 -      5494 T-G---GGGTA-----G--AGTGAGCACTT-AC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490563 21 -  27778364 T-G---GGTCA-----G--AGGGGACACTT-AG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17396 21 +     27315 T-G---GGTCA-----G--AGGGGACACTT-AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139096 24 -   4669795 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42836 24 +     47900 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42669 24 -     44860 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42652 24 -    148725 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9909 24 -     17524 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25631 24 -     34525 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30107 24 -     45857 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23600 24 +     70610 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20525 24 +     36323 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11215 21 -     19938 T-G---GGGCA-----G--ATCAGGTGCTC-AG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 3
s Cheirogaleus_major.k141_666340                             29042 20 -     33796 T-G---GGTTG-----G--CATGAGTG-TT-AG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3558 20 -     15404 T-G---GGGTG-----G--CGTGAGTG-TT-CG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7409 25 -     32913 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17822 25 -     40346 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18077 25 +    216457 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17870 25 +     39636 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2458 25 +      5346 T-G---GGGCACCCA-G--AGTGGACGCTT-AG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40956 25 -    112038 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6528 25 +     34062 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341422 24 +  18827391 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7967 24 -     44032 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302747 24 - 135778131 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10263 21 +     15858 T-G---GGAGA-----G--GGTGGATGCTT-AG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601839 21 -    839153 T-G---GGAGA-----G--GGTGGATGCTT-AG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407188 24 -   2368649 T-G---GG-TGCCCA-G--AGTGGACGCTT-CG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377066 24 - 200372422 T-G---GG-TGCCCA-G--AGTGGACGCTT-CG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                613 24 -     84244 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805641 21 +  53390261 T-T---GGTTA-----G--AGTGAGTGCTT-AG
i Condylura_cristata.JH655891.1                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1155 21 -      8242 T-G---GATCA-----G--AGTGTGTGCTT-AG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40662 21 -     83289 CAG----AGTA-----G--AATGAACACTT-AG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 6
s Cricetulus_griseus.LT883664.1                          213113128 21 - 224834208 CAG----AATA-----G--AATGAGCACTT-AG
i Cricetulus_griseus.LT883664.1                          C 0 I 6
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2688 21 +     87169 T-G---GGTCA-----G--AGTGGGTGCTT-AT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643159 20 -   1526836 T-G----GATG-----G--AGTGGGTACTC-AG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3384 21 +     50838 TAA----GTTA-----A--TGTGAACATAT-AT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2242 18 +     36344 -------GTTA-----G--TGTGGGCACTT-GC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108552 20 -   2246927 T-G----AGCA-----G--AGTGGATGCTT-GG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290978 20 +  12879189 T-G---GGGCA-----G--AGTGAGTA-CT-AG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863122 21 -  20541912 T-G---GGTCA-----G--CGGTGGTGCCT-GG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662855 21 -   1390856 T-G---GGTCA-----G--AGGGGACACTT-AG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137640 21 -    198055 T-G---GGTCA-----G--AGGGGACACTT-AG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96859 21 -    115145 CAG----GTTA-----G--TGTGGGCACTT-AC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948724 19 -  37912305 --G----AGTA-----G--AGTAGGTGCTC-AG
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3671 19 -     10735 --G----AGTA-----G--AGTAGGTACTC-AG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8303 21 +     14636 TAG----GTTA-----G--TGTGGGCACTT-AC
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852311 21 - 111700974 T-G---CAGTA-----C--AGCGTGAGCTT-TG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4685 21 +     19438 T-G---GATCA-----G--AGTGGGCACTT-AG
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105852 21 -  10337057 T-G---GGGTA-----G--AAAGAACAGGT-AG
i Elephantulus_edwardii.JH947257.1                       N 0 N 0
s Ellobius_lutescens.LOEQ01008920.1                          29409  7 +    110024 CAG----AATC----------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 23
s Ellobius_talpinus.LOJH01026522.1                           11377  7 +     18970 CAG----AATA----------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 7
s Enhydra_lutris.KZ291758.1                               24914515 21 +  41312741 T-G---GGTCA-----G--AACAGGTGCTT-AG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576751 21 +  14770903 T-G---GATC-----AG--AGTGGGTGCTT-AG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039848 20 -   4378816 T-G---GGTCA-----G--GGGG-GCATGT-AG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373782 20 +  39960074 T-G---GGTCA-----G--GGGG-GCATGT-AG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410568 20 -    498745 T-G---GGTCA-----G--GGGG-GCATGT-AG
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260945 24 +  21539334 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13150 20 -     24895 T-G---GGGTG-----G--AGTGAGTA-CT-AG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40859 20 -     70999 T-G---GGGTG-----G--AGTGAGTA-CT-AG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84821 20 +    112731 T-G---GGGTA-----G--AGTGAGTA-CT-AG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41394 20 +     68309 T-G---AGGTG-----G--AGTGAGTA-CT-AG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51716 20 -     65740 T-G---GGGTG-----G--AGTGAGTA-CT-AG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22349 20 -     75513 T-G---GGGTG-----G--AGTGAGTA-CT-AG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46542 20 -     97555 T-G---GGGTG-----G--AGTGAGTA-CT-AG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3269 20 +     30972 T-G---GGGTG-----G--AGTGAGTA-CT-AG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  40989 20 -     52037 T-G---GGGTG-----G--AGTGAGTA-CT-AG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57393 20 -    111500 T-G---GGGTG-----G--AGTGAGTA-CT-AG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245144 21 - 206538554 T-G---GGTTA-----G--AGTCAGTGCTT-AG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114930 21 - 205367284 T-G---GGTTA-----G--AGTCAGTGCTT-AG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26032 21 -     30238 T-G---GGTTA-----G--AGTCAGTGCTT-AG
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17461 21 +     18121 T-G---GGGTA-----C--AGTGGGCATTT-AG
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32326 20 -     36801 T-G----GGTA-----G--AGTAGGTACTT-AG
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_668773                                 819 25 -      1303 T-G---GAGCACCCA-G--AGTGGACACTT-CA
i Gorilla_beringei.k141_668773                           I 4 C 0
s Gorilla_gorilla.LT578341.1                                252877 25 - 186649187 T-G---GAGCACCCA-G--AGTGGACACTT-CA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11642 20 +     11903 T-G----GGTA-----G--ACTGGGTACTT-AG
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13077 20 -     40692 C-G---GGGTG-----G--AGTGAGTA-TT-AG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34478 20 +     49394 C-G---GGGTG-----G--AGTGAGTA-TT-AG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59347 20 -     66874 C-G---GGGTG-----G--AGTGAGTA-TT-AG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8220 20 -     42923 C-G---GGGTG-----G--AGTGAGTA-TT-AG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15220 20 -     53142 T-G---GGGTG-----G--AGTGAGTA-CT-AG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29172 21 -    327341 T-G---GATCA-----G--AGTGGGTGCTT-AG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925445 21 -  22651954 TAG----GTTA-----A--TGTGGGCACTT-AC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49228 21 +     49977 T-G---AATCA-----G--AGTGGGCATTT-AA
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140865 26 -    630532 T-G---GGGCACCCA-G--AGTGGACACTTCCA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67848 21 +     83186 T-G---GGTCA-----G--AGTGGGTGCTT-AG
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69738 21 +    143317 TAG----GTTA-----G--TGTGGGCACTT-AC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               3900 25 +     12352 T-G---AGGCACCCA-G--AGTGGACACTT-CG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11083 25 +     55766 T-G---AGGCACCCA-G--AGTGGACACTT-CG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050679 25 + 191637585 T-G---GGGCACCCA-G--AGTGGACACTT-CG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799557 25 +  11177569 T-G---GGGCACCCA-G--AGTGGACACTT-CG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385159 20 +   7955117 G-A----GATA-----G--AGTAAGCACTT-AG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     730 20 +     11955 T-G---GGGTG-----G--TGTGAGTA-CT-AG
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237582 10 +   9596543 T-GA---GGTA-----G--A------------G
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41677 25 +    110728 C-G---GGGCACCCA-G--AGTGGACACTT-AG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60225 21 -     65777 T-G---GATC-----AG--AGTGGGTGCTT-AG
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757868 20 +  30322482 C-G---GGGTG-----G--AGTGAGTA-CT-AG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2594 25 -     13097 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2349 25 +      5940 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2179 25 -      5717 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8543 25 -     11567 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9924 25 -     12945 T-G---GGGCACCCC-G--AGTGGACACTT-AG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7399 20 +     29618 T-G---GGGTG-----G--GGTGAGTA-CT-AG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7396 20 +     31569 T-G---GGGTG-----G--GGTGAGTA-CT-AG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7407 20 +     24756 T-G---GGGTG-----G--GGTGAGTA-CT-AG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7405 20 +     16388 T-G---GGGTG-----G--GGTGAGTA-CT-AG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811906 21 -   3914936 T-G---GGTCA-----G--AAAGGGTGCTT-GG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16248 20 +     24238 T-G---GGATG-----G--AGTATG-GCTT-AG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331049 24 -   1826925 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39078653 21 +  43346337 G-G---GGGCA-----G--AGTGAACATTT-AG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613057 21 +  59628241 T-G---GGTCA-----G--AATGAGTGCTT-AG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43366 24 -     61512 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371027 24 -  60120075 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23282 24 +     30207 T-G---GG-TGCCCA-G--AGTGGACACTT-TG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20385 24 -     24934 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23234 24 +     30527 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34423 24 -     50087 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44194 24 +     51645 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413363 24 - 187317192 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397586 24 +  25927173 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46750 24 -     62418 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23405 24 +     24253 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43225 24 +     59329 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269153 24 +    668171 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20340 24 +     21031 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  937 24 +     17132 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221648 21 -    270270 T-G---GATCA-----G--AGTGGGCACTT-AG
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320437 24 +  24302211 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355269 24 -    752769 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671928 21 -    737560 T-G---GGTCA-----A--AGTGGGTGATT-AG
i Manis_javanica.JSZB01003497.1                          C 0 I 6
s Manis_pentadactyla.KN006162.1                             219216 21 +    317179 T-G---GGTCA-----A--AGTGGGTGGTT-AG
i Manis_pentadactyla.KN006162.1                          C 0 I 6
s Marmota_marmota.CZRN01000018.1                           7499384 20 +  40650429 G-A----GATA-----G--AGTAAGCACTT-AG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148838 21 +    207569 T-G---GATCA-----G--AGTGAGTGCTT-AG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24399 21 -     74585 T-G---GATCA-----G--AATAGGCGCTT-AG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47034 21 -    140813 CAA----AGTA-----G--AATGAATACTT-AG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 6
s Mesocricetus_auratus.KB708134.1                         17427681 21 +  29670104 CAG----AATA-----G--AATGAGCAATT-AG
i Mesocricetus_auratus.KB708134.1                        C 0 I 6
s Mico_argentatus.k141_582562                                 8713 25 +     17804 t-G---GGGCACCCA-G--AGTGGACACTT-AG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9224 19 -     12984 ----------ACCCA-G--AGTGGACACTT-AG
i Mico_humeralifer.k141_1180625                          I 151 C 0
s Mico_schneideri.k141_1877700                                     17532 25 -     26561 t-G---GGGCACCCA-G--AGTGGACACTT-AG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983009 20 +  93316391 T-G---GGGTG-----G--GGTGAGTA-CT-AG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43403 21 +    145209 T-G---CAGTG-----C--AGCACAAGTTT-GG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183066 20 +    200668 A-G---GGTCA-----G--GGCTGGTGCCT-A-
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960801 21 +  27267610 CAG----AATA-----G--AATGAGTACTT-AG
i Microtus_ochrogaster.CM001695.1                        C 0 I 6
s Miniopterus_natalensis.LDJU01000034.1                    6361181  7 -   8254450 T-G---GATC------C----------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_23309             40082  7 -     48117 T-G---GATC------C----------------
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 1
s Miopithecus_ogouensis.k141_1534655                         20463 24 -     27822 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6917 21 +     27589 T-G---GGTCA-----G--AAAGGGTGCTT-GG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50800 20 -     62432 T-G---GGGTG-----G--TGTGAGTA-CT-AC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177220 20 +    366855 T-G---GATCA-----G--GGTTGGCGCTT-A-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16925 21 -     63510 T-G---GGTCA-----G--AGTGGGTGCTT-AG
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37094 21 +     47283 T-G---GATC-----AG--AGTGGGTGCTT-AG
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   5110 21 +      5579 CAA----AGTA-----G--AATGAATATTT-AG
i Mus_caroli.FMAL02030609.1                              C 0 I 6
s Mus_musculus.chr8                                       41685813 21 + 129401213 CAA----AGTA-----G--AATGAATATTT-AG
i Mus_musculus.chr8                                      C 0 I 6
s Mus_spretus.CM004101.1                                  39495131 21 + 130317789 CAA----AGTA-----G--AATGAATATTT-AG
i Mus_spretus.CM004101.1                                 C 0 I 6
s Muscardinus_avellanarius.MusAve_scaffold_12866             80912 20 -     86153 T-G----GGTA-----G--GGTGGGTACTT-TG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353551 21 +  14710649 T-G---GGTCA-----G--AACAGGTGCTT-AG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791139 21 +  10118263 T-G---GATC-----AG--AGTGGGTGCTT-AG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385501 21 +   6019432 T-G---GATC-----AG--AGTGGGTGCTT-AG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381321 21 +   4330536 T-G---GATC-----AG--AGTGGGTGCTT-AG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_185951                        3880 21 +      3929 T-G---GATC-----AG--AGTGGGTGCTT-AG
i Myotis_myotis.MyoMyo_scaffold_185951                   C 0 N 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              117982 21 +    130748 T-G---GGGCA-----G--AGTGGATGATT-AG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              27047 24 +     34575 C-G---GG-TGCCCA-G--AGTGGACACTT-CC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467509 21 -  31847680 T-G---GGTCA-----G--AAAGTGTGCTT-GG
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126030 21 -    149072 T-G---GATCA-----G--GGCCTGCAATT-AG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51789 25 -    132029 T-G---GGGCACCCA-G--AGTGGACACTT-CA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7884 25 -     16345 T-G---GGGCACCCA-G--AGTGGACACTT-CG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13769 25 +     22201 T-G---GGGCACCCA-G--AGTGGACACTT-CG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_a.k141_941534                                  24167 25 -     54323 T-G---GGGCACCCA-G--AGTGGACACTT-CG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196659 21 +   9404916 T-G---GGTCA-----G--AATGAGTGCTT-AG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2549627 20 -   3988456 A-G---GGATG-----G--ATTAGA-GCTT-AA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045890 21 -  11899542 TAG----GTTA-----G--TTTGAGCATGT-AT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450105 21 +   2017862 T-G---GGTCA-----G--AATGGGTGCTT-GG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91161 21 -    140218 CTG----AATA-----G--AATGAGCACTT-AG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 6
s Onychomys_torridus.OnyTor_scaffold_28377                    1535 21 -     41509 GGG----AATA-----G--ATTGAGCTCTT-AG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 6
s Orycteropus_afer.OryAfe_flattened_line_171931              11771 21 -     14239 T-A---GGGCA-----A--AGTGAAAATTT-AG
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102082 20 - 174332312 T-G---GGATG-----G--ATTATG-GTTT-AG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37696 21 +    559221 T-G---GGTCA-----G--AATGAGTGCTT-AG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_troglodytes.CM009242.2                               1470882 25 - 189151597 T-G---GAGCACCCA-G--AGTGGACACTT-CA
i Pan_troglodytes.CM009242.2                             C 0 I 124
s Panthera_onca.PanOnc_flattened_line_3271                   22853 21 -    230217 T-G---GGTTA-----G--AGTCAGTGCTT-AG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460179 21 -  18783137 T-G---GGTTA-----G--AGTCAGTGCTT-AG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970899 21 +   8748460 T-G---GGTTA-----G--AGTCAGTGCTT-AG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241277 24 - 183742232 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7741 24 +     21308 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288780 24 -  20919399 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20396 24 -     27687 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13532 24 +     16796 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20342 24 -     23640 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13491 21 +     78924 T-G---GGTCA-----G--AGTGGGTGCTT-AG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       37968 19 +     38305 --G----AGTA-----G--AATGGGTGCTC-AG
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245253 21 +  18517816 CAG----AATA-----G--AATGAGCTCTT-AG
i Peromyscus_maniculatus.KI615324.1                      C 0 I 6
s Petromus_typicus.PetTyp_scaffold_17301                     30347 21 -     56120 TAG----GTTA-----A--TGTGGGCACTT-AC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             563 24 +     55023 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             564 24 +     40849 T-G---GG-TGCCCG-G--AGTGGACACTT-CG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252312 24 +  14605196 T-G---GG-TGCCCG-G--AGTGGACACTT-CG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1274 21 +     22231 T-G---GATC-----AG--AGTGGGTGCTT-AC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63314 25 +    207309 T-G---GGGCACCCA-G--GGTGGACACTT-AG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4408 25 -     25401 T-G---GGGCACCCA-G--GGTGGACACTT-AG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30149 25 +     58159 T-G---GGGCACCCA-G--GGTGGACACTT-AG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30425 25 +     63561 T-G---GGGCACCCA-G--GGTGGACACTT-AG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30188 25 +     51148 T-G---GGGCACCCA-G--GGTGGACACTT-AG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555155 25 -   4542175 T-G---GGGCACCCA-G--GGTGGACACTT-AG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30172 25 +     51125 T-G---GGGCACCCA-G--GGTGGACACTT-AG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6578 25 +     39866 T-G---GGGCACCCA-G--AGTGGACACTC-AG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1663 25 -      9282 T-G---GGGCACCCA-G--AGTGGACACTC-AG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41067 25 -     87950 T-G---GGGCACCCA-G--AGTGGACACTC-AG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41460 25 -     88961 T-G---GGGCACCCA-G--AGTGGACACTC-AG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6159 25 -     39403 T-G---GGGCACCCA-G--AGTGGACACTC-AG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41111 25 +     87928 T-G---GGGCACCCA-G--AGTGGACACTC-AG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6156 25 -     60166 T-G---GGGCACCCA-G--AGTGGACACTC-AG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13092 25 -     67232 T-G---GGGCACCCA-G--AGTGGACACTC-AG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41008 25 -     90634 T-G---GGGCACCCA-G--AGTGGACACTC-AG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42476 25 +     89403 T-G---GGGCACCCA-G--AGTGGACACTC-AG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176010 25 - 189387572 T-G---GAGCACCCA-G--AGTGGACACTT-CG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190828 25 -   9816681 T-G---GAGCACCCA-G--AGTGGACACTT-CG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25696 24 +     69807 C-G---GG-GACCCA-G--AGTGGACACTT-CC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42891 24 -     80239 C-G---GG-GACCCA-G--AGTGGACACTT-CC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981024 20 +   4620579 T-G---GGGTG-----G--AGTGAGTA-CT-AG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564491 20 -   2598838 T-G---GCGTG-----G--TGTGAGTA-CT-AG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2127 20 -      7103 T-G---GCGTG-----G--TGTGAGTA-CT-AG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2724 20 -     11706 T-G---GCGTG-----G--TGTGAGTA-CT-AG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6460 20 -     30655 T-G---GCGTG-----G--TGTGAGTA-CT-AG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32785 20 +     46564 T-G---GCGTG-----G--TGTGAGTA-CT-AG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93056 20 -     98465 T-G---GCGTG-----G--TGTGAGTA-CT-AG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6693 20 +     35169 T-G---GCGTG-----G--TGTGAGTA-CT-AG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34572 21 +     52041 CAA----AGTA-----G--AAAGAATGCTT-AG
i Psammomys_obesus.NESX01036366.1                        C 0 I 6
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3116 21 -     18639 T-G---GGTCA-----G--AATAGGTGCTT-AG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839277 21 -  28871421 T-G---GATCA-----G--AGTGGACACTT-AG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535844 21 -   4952924 T-G---GATCA-----G--AATGGACACTT-AG
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097495 21 +  38429054 T-G---GGTTA-----G--AGTCAGTGCTT-AG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25071 24 +     91421 C-G---GG-TGCCCA-G--AGTGGACACTT-CC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151564 24 -   7812017 C-G---GG-TGCCCA-G--AGTGGACACTT-CC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5941 24 +     72585 C-G---GG-TGCCCA-G--AGTGGACACTT-CC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021024 21 -  90668790 CAA----AGTA-----G--AAAGAATATTT-AG
i Rattus_norvegicus.chr16                                C 0 I 6
s Rhinolophus_sinicus.LVEH01000134.1                       2913241 21 +   3329780 T-G---GATCA-----G--AGTAGGCGCTT-AG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26881 24 +     27361 C-G---GG-TGCCCA-G--AGTGGACACTT-CC
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120248 24 + 195417433 C-G---GG-TGCCCA-G--AGTGGACACTT-CC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234489 24 -   7961872 C-G---GG-TGCCCA-G--AGTGGACACTT-CC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73260 21 -    116970 T-G---GATCA-----G--AGTGGGCACTT-AG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2456 25 +     27962 T-G---GGGCACCCA-G--AGTGGACGCTT-AG
i Saguinus_bicolor.k141_1429097                          I 246 C 0
s Saguinus_geoffroyi.k141_3779887                             2351 25 +      6077 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Saguinus_geoffroyi.k141_3779887                        I 137 C 0
s Saguinus_imperator.k141_1898058                             2443 25 +      5971 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Saguinus_imperator.k141_1898058                        I 184 C 0
s Saguinus_inustus.k141_2469308                               2385 25 +      5932 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Saguinus_inustus.k141_2469308                          I 81 C 0
s Saguinus_labiatus.k141_2380921                               708 25 -      4390 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Saguinus_labiatus.k141_2380921                         I 212 C 0
s Saguinus_midas.LG03                                       390140 25 - 209938924 t-G---GGGCACCCA-G--AGTGGACACTT-AG
i Saguinus_midas.LG03                                    I 242 C 0
s Saguinus_mystax.k141_8077960                                2333 25 +      5979 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Saguinus_mystax.k141_8077960                           I 81 C 0
s Saguinus_oedipus.k141_1466288                               3074 25 -      4301 t-G---GGGCACCCA-G--AGTGGACACTT-AG
i Saguinus_oedipus.k141_1466288                          I 242 C 0
s Sapajus_apella.ctg103                                     236737 25 +   5703754 T-G---GGGCACCCA-G--AGTGGACACTT-AA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6327 25 +     21866 T-G---GGGCACCCA-G--AGTGGACACTT-AG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114433 20 +    313613 T-T---GGTTA-----G--AGTGA-TACTT-AA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 1
s Semnopithecus_entellus.k141_158471                         23388 24 +     27374 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26907 24 +     58920 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13403 24 -     45317 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21061 24 -     42441 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23741 24 -     29113 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26810 24 -     48123 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47104 21 +     77746 GAG----AATA-----G--AATGAGCACTT-AG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 6
s Solenodon_paradoxus.SolPar_flattened_line_126            1856761 21 -   1910179 T-G---GATCA-----G--AGTAGGTGCTC-AG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866742 20 +   3870691 G-A----GATA-----G--AGTAAGCACTT-AG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123332 21 +    196729 T-G---GGTCA-----G--AGTGGGTGCCT-AG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 4
s Symphalangus_syndactylus.tarseq_199                       389326 25 +   1523678 T-G---GGGCACCCA-G--AGTGGACACTT-TG
i Symphalangus_syndactylus.tarseq_199                    C 0 I 4
s Tadarida_brasiliensis.TadBra_scaffold_54991                12083 20 +     22964 T-G---GGTC------G--AGTGGGTGCTG-AG
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1103 21 +      5583 T-G---GGGCA-----G--AGTGGATGATT-AG
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190017 20 +    199430 T-G---TGTCA-----G--AGGGGGC-CTT-AG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103968 20 -    539355 T-G---TATCA-----G--AGGGGGC-CTT-AG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5326 21 +      6850 T-G---GGGTA-----G--AGTGAGCACTT-AT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5367 21 +     20590 T-G---GGGTA-----G--AGTGAGCACTT-AT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351263 24 - 186847797 T-G---GG-TGCCCA-G--AGTGGACACTT-CG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22672 23 -     33621 TAA----GTTA-----GTTTGTGAGCACTT-AC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18238 21 -     31044 T-G---GGGCA-----G--AGTGGACACTA-AG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478126 21 -    610378 T-G---GGTCA-----G--GGTTGGTGCCC-AG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        18952 24 +     26378 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31616 24 -     78344 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18273 24 +     25722 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26498 24 -     62838 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Trachypithecus_francoisi.k141_1453105                  C 0 I 69
s Trachypithecus_geei.k141_1001272                           26615 24 +     46913 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7421 24 -     28527 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28437 24 -     64340 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 69
s Trachypithecus_laotum.k141_928651                          26474 24 -     63452 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Trachypithecus_laotum.k141_928651                      C 0 I 69
s Trachypithecus_leucocephalus.k141_96450                     7917 24 +     22490 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Trachypithecus_leucocephalus.k141_96450                C 0 I 69
s Trachypithecus_melamera.k141_591572                         1345 24 -      6147 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8319 24 -     13050 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253558 24 -   6242583 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59309 24 +     59866 C-G---GG-TGCCCA-G--CGTGGACACTT-CC
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     636 20 -     21056 T-G---GGTCA-----G--AATGGATG-TT-AA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 1
s Ursus_maritimus.KK499267.1                                180266 21 +   5085361 T-G---GGTCA-----G--AATCGGTGCTT-AG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23669 20 -     30710 T-G---GGGTG-----G--AGTAAGTA-CT-AG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22576 20 -    147434 T-G---GGGTG-----G--AGTAAGTA-CT-AG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103418 21 -    112863 T-G---GGTCA-----G--AATGAGTGCTT-AG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172520 20 -    224448 G-A----GATA-----G--AGTAAGCACTT-AG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27303 21 -     86975 T-G---GGTCA-----G--AACGGGTGCTT-GG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1765 21 +      2695 T-G-G--GGTA-----G--ATTGGGCACCT-GG
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Perodicticus_potto.k141_1854441                            16752  2 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          24393  2 +     31479 I
e Otolemur_garnettii.GL873799.1                             351112  2 +   1103335 I
e Otolemur_crassicaudatus.k141_649260                        38109  2 -     51505 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562966  2 - 199412804 I
e Nycticebus_coucang.k141_3846325                             1485  2 -      3937 I
e Nycticebus_bengalensis.LG01                             93634727  2 + 196305487 I
e Loris_tardigradus.ctg83                                  5042376  2 -   6120653 I
e Loris_lydekkerianus.k141_2031736                            8715  2 +     19643 I
e Galagoides_demidoff.k141_561628                            18553  2 -     32986 I
e Galago_senegalensis.k141_991736                             6501  2 +     22493 I
e Galago_moholi.ctg3793                                     122956  2 -    137831 I
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508  0 -   4065304 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              4924  0 -     97271 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Pteronotus_parnellii.KE847780.1                            50154 13 -     66298 I
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Nomascus_siki_b.tarseq_93                            8412025  0 -  22158432 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786  8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20137 17 -     39886 I
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Callimico_goeldii.k141_1609886                              8174  0 -     13885 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3552 91 +     36723 A--C--AG-GG-T----------------CTG-GTAGTCAGTGCTGGCCAGT-AGGTTGTCGTGGGGCACCCAGAGTGGACACTTTGACGTGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
s Acinonyx_jubatus.LLWD01001279.1                           811253 38 +   1699592 G--T-A-G-AG-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT-------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18487 29 +     63021 -------------------------------A-G----------------------------------------------------------------AAGA--TGGA--CCAG-TGG-C-A---A-A----C-AG--TA--T------AT-------
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 5 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413781 19 +  29979442 G--AG--G-AC-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--------------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 18
s Ailurus_fulgens.LNAC01001112.1                            213893 35 +    347723 G--TG--G-AC-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--TTAA-CAGA-------------C-AT--TA--T------AT-------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16404 38 -     61208 A--T--GA-GA-T----------------TTG-G----------------------------------------------------------------GAGC--AGAG--CTA---G-A--AGT-A-G-T--T-AT--TT--T------GT-------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   45941 28 +     53615 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41885 28 +     44087 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14523 28 -     21945 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16195 28 +     32033 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70648 28 -     84148 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42881 28 -     78289 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42327 28 +     55831 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40768 28 -     64179 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22415 28 -     24835 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39398 28 +     45454 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45096 28 +     70886 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7221 28 +     30854 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31360 28 +     42133 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175111 39 -    412891 G-TG---G-AG-G----------------CTG-G----------------------------------------------------------------GAAT--GGAG--T-TG-TG-A--A-C-A-G-T--C-AT--TA--T------TT------A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49163 28 -     65372 A--T--GG-GA-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42917 28 +     43593 A--T--GG-GA-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670930 28 +   5030052 A--T--GG-GA-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22572 28 -     23494 A--T--GG-GA-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7708 28 +      8415 A--T--GG-GA-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14442 35 -     32367 A--A--GG-AA-T----------------CTC-A----------------------------------------------------------------GAAT--AAAG--T----TGG-T-A-G-A------T-AT--TA--T------TT-------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3401 39 -     15198 G-TG---G-TG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--TTGT-C--A--A-C-A-G-A--C-AC--TA--T------TT------A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273160 28 +  21539123 A--T--GG-GG-T----------------CTG-T----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9326 28 +     48076 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4463 28 -     28759 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32017 28 +     44353 A--T--GG-GG-T----------------CTG-T----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47387 28 -     71267 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21447 28 -     33135 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4627 39 +     11645 A--T--GG-GG-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--CTGC--TCAC-A-G-A------C-AT--TA--T------TT------C
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4633 39 -     19611 A--T--GG-GG-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--CTGC--TCAC-A-G-A------C-AT--TA--T------TT------C
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6352 28 +     28062 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41646 28 -     91139 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19172 28 +     95584 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19085 28 +    119600 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8631 28 +     18648 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8174 23 -     13885 ----------G-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--CA--T------GT------C
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             237 28 -      8861 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452630 28 + 189096842 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                153 28 +      8664 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42503809 34 +  60362399 G--TG--A-AA-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--G----TG-TT-AAT-A-G-A--C-AT--T-------------------
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7445 34 -     23171 G--TG--A-AA-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--G----TG-TT-AAT-A-G-A--C-AT--T-------------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                          220788 34 +   9314153 G--TG--A-AA-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--G----TG-TT-AAT-A-G-A--C-AT--T-------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            41613923 34 +  59632846 G--TG--A-AA-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--G----TG-TT-AAT-A-G-A--C-AT--T-------------------
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            45105504 34 -  63665305 G--TG--A-AA-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--G----TG-TT-AAT-A-G-A--C-AT--T-------------------
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Carlito_syrichta.NW_007259797.1                           268708 39 +    496798 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--CTGT-TAGCT---G-A------C-AT--TA--T------TT------C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3693 39 +      5315 G-TG---G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--TTGT-C--A--A-C-A-G-A--C-GT--TA--T------TT------A
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20154  1 -     39886 ------------------------------------------------------------------------------------------------------------------------------------------------------G-------
i Castor_canadensis.CasCan_scaffold_39952                I 17 C 0
s Cavia_aperea.AVPZ01000300.1                              4994381 20 +  23392119 A--T--GA-GC-T----------------CCT-A----------------------------------------------------------------GAGC--ATAA--T-----------------------------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 10
s Cavia_porcellus.DS562891.1                               4997823 20 +  23407841 A--T--GA-GC-T----------------CCT-A----------------------------------------------------------------GAGC--ATAA--T-----------------------------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 10
s Cavia_tschudii.CavTsc_scaffold_23560                       60924 20 -     66877 A--T--GA-GC-T----------------CCT-A----------------------------------------------------------------GAGC--ATAA--T-----------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 10
s Cebuella_niveiventris.k141_592277                           3550 28 -     12580 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41605 28 +     53515 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369543 28 -  26074798 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6432 28 -     34880 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65527 28 -     89041 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          632 39 -      5494 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--CTGT-TAGCT---G-A------C-AT--TA--T------TT------C
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490584 39 -  27778364 G--TG--G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT------T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17417 39 +     27315 G--TG--G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139120 28 -   4669795 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42860 28 +     47900 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42693 28 -     44860 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42676 28 -    148725 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9933 28 -     17524 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25655 28 -     34525 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30131 28 -     45857 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23624 28 +     70610 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20549 28 +     36323 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11239 31 -     19938 ------------------------------CG-G----------------------------------------------------------------GTAC--AGAG--C-TC-TTGGC-A-----G-G--C-AC--TA--A------GT------C
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 3 C 0
s Cheirogaleus_major.k141_666340                             29062 39 -     33796 G--T--GG-GG-T----------------CTG-A----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3578 39 -     15404 A--T--GG-GG-T----------------CTG-A----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7434 28 -     32913 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--C------AT------C
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17847 28 -     40346 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--C------AT------C
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18102 28 +    216457 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--C------AT------C
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17895 28 +     39636 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--C------AT------C
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2483 28 +      5346 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           40981 28 -    112038 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6553 28 +     34062 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--T-----------------------AT--TA--T------GT------C
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341446 28 +  18827391 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        7991 28 -     44032 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302771 28 - 135778131 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10284 39 +     15858 G--T--GG-GG-T----------------TTG-G----------------------------------------------------------------GAAC--AGAG--TTGT-TGG-C-A-G-A------C-AT--TA--T------TT------C
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601860 39 -    839153 G--T--GG-GG-T----------------TTG-G----------------------------------------------------------------GAAC--AGAG--TCAT-TGG-C-A-G-A------C-AT--TA--T------TT------C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407212 28 -   2368649 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377090 28 - 200372422 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                637 28 -     84244 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805663 37 +  53390261 ------TG-AG-T----------------CTG-G----------------------------------------------------------------GAAT--GGCA--T----TG-TT-A-G-C-AGA--T-AC--TG--T------TT------A
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1176 19 -      8242 G-TG---G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 17
s Cricetomys_gambianus.CriGam_scaffold_14425                 40689 32 -     83289 -------------------------------A-G----------------------------------------------------------------AAAT--CAAA--CCAC-CGGAT-A-T-A-A-A--C-AA--TA--T------AT-------
i Cricetomys_gambianus.CriGam_scaffold_14425             I 6 I 1
s Cricetulus_griseus.LT883664.1                          213113155 29 - 224834208 -------------------------------A-G----------------------------------------------------------------GAGT--TGAA--CTGG-TGG-T-A---A-A----C-AG--TA--T------AT-------
i Cricetulus_griseus.LT883664.1                          I 6 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2709 35 +     87169 G--T-A-G-AA-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--TTAA-CAGA-------------C-AT--TA--T------TT-------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643179 38 -   1526836 G--T--GC-AT-T----------------CTG-G----------------------------------------------------------------GAGC--AGAA--C----TG-TT-A-G-C-AGA--C-AT--TA--T------TT-------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3405 20 +     50838 A--T--TA-CT-T----------------CCT-G----------------------------------------------------------------GAGC--AGGA--C-----------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 20
s Cuniculus_paca.CunPac_flattened_line_7025                   2260 20 +     36344 A--T--GA-GC-T----------------CCT-G----------------------------------------------------------------GAGC--AAAA--T-----------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 20
s Dasypus_novemcinctus.JH564415.1                          2108572 39 -   2246927 G--T--GG-GA-c----------------gtg-g----------------------------------------------------------------ggat--ggag--c-tg-ctggT-G-G-A------C-AT--TA--T------TT------C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        290998 39 +  12879189 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AAAG--C----TG-TT-A-C-C-ACA--C-AT--TA--T------TT------C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863143 39 -  20541912 G-AG---G-GG-T----------------CCG-G----------------------------------------------------------------GAAC--AGAG--TTGT-C--A--A-C-A-G-A--C-AT--TA--T------TT------A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662876 39 -   1390856 G--TG--G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT------T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137661 39 -    198055 G--TG--G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT------T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96880 20 -    115145 A--T--GA-GT-T----------------CCT-G----------------------------------------------------------------GGGC--AGAA--T-----------------------------------------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 20
s Dipodomys_ordii.KN672350.1                              18948743 39 -  37912305 G--T--TG-GA-T----------------CTG-G----------------------------------------------------------------GAGC--AGAA--TTGT-TAG-C-A-T-A------T-AC--TA--T-----GTC-------
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3690 39 -     10735 G--T--TG-GA-T----------------CTG-G----------------------------------------------------------------GAGC--AGAA--TTGT-TAG-C-A-T-A------T-AC--TA--C-----GTC-------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8324 20 +     14636 A--T--GA-GT-T----------------CCT-A----------------------------------------------------------------CAGC--GCGA--T-----------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 20
s Echinops_telfairi.JH980293.1                            62852332 36 - 111700974 G--C--AG-CA-T----------------CTG-A-------------------------------------------------------------------C--A--ACATTAT-TAG-C-G-G-A-A------AT--GA--T------TT------C
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4706 39 +     19438 G-TG---G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG-TT-AAT-A-G-A--C-AT--TA--T------TT------C
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         7814940 39 -  10337057 G--T--GG-CA-C----------------CTG-A----------------------------------------------------------------GAGC--AGAT--TTA-----TT-A-G-C-A-G--GTAT--TA--T------TT------C
i Elephantulus_edwardii.JH947257.1                       N 0 N 0
s Ellobius_lutescens.LOEQ01008920.1                          29439  7 +    110024 --------------------------------------------------------------------------------------------------------------------------------------GG--TA--T------AT-------
i Ellobius_lutescens.LOEQ01008920.1                      I 23 I 1
s Ellobius_talpinus.LOJH01026522.1                           11391 29 +     18970 -------------------------------A-G----------------------------------------------------------------GAGT--TGGA--CTGG-TGG-T-A---A-A----T-GG--TA--T------AT-------
i Ellobius_talpinus.LOJH01026522.1                       I 7 I 1
s Enhydra_lutris.KZ291758.1                               24914536 38 +  41312741 G--TG--G-AC-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A-ACA-A-A--C-CT--TA--T------AT-------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576772 39 +  14770903 G-TG---T-AT-T----------------CTG-G----------------------------------------------------------------AAAC--GGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT------A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039868 39 -   4378816 A--TG--G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT------T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373802 39 +  39960074 A--TG--G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT------T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410588 39 -    498745 A--TG--G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT------T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260969 28 +  21539334 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13170 39 -     24895 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-AT--TA--T------TT------G
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40879 39 -     70999 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-AT--TA--T------TT------G
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84841 39 +    112731 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-TT--TA--T------TT------G
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41414 39 +     68309 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--C----TG-TT-A-C-C-AGA--C-AT--TA--T------TT------G
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51736 39 -     65740 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-AT--TA--T------TT------G
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22369 39 -     75513 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-AT--TA--T------TT------G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46562 39 -     97555 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-AT--TA--T------TT------G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3289 39 +     30972 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-AT--TA--T------TT------G
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41009 39 -     52037 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-AT--TA--T------TT------G
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57413 39 -    111500 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-AT--TA--T------TT------G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245165 38 - 206538554 G--T-A-G-AG-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT-------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114951 38 - 205367284 G--T-A-G-AG-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT-------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26053 38 -     30238 G--T-A-G-AG-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT-------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122958 35 -    137831 ---------GG-C----------------CTG-G----------------------------------------------------------------GAGC--TCAG--CTA---TTA--A-C-A-G-A--C-AT--TA--T------TT------C
i Galago_moholi.ctg3793                                  I 2 I 2
s Galago_senegalensis.k141_991736                             6503 35 +     22493 ---------GG-C----------------CTG-G----------------------------------------------------------------GAGC--TCAA--CTA---TTA--A-C-A-G-A--C-AT--TA--T------TT------C
i Galago_senegalensis.k141_991736                        I 2 I 2
s Galagoides_demidoff.k141_561628                            18555 35 -     32986 ---------GA-C----------------CTG-G----------------------------------------------------------------GAGC--TCAG--CTA---TTA--A-C-A-G-A--C-AT--TA--T------TT------C
i Galagoides_demidoff.k141_561628                        I 2 I 2
s Galeopterus_variegatus.GalVar_scaffold_74466               17482 39 +     18121 A--T--GG-AG-T----------------CTG-G----------------------------------------------------------------AAGC--AGAG--CTGTTCGCAG-A----------C-AT--TT--T------TT------C
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32346 35 -     36801 A--T--GG-GA-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--C-TC-----T---T-A-G-A--C-AT--TA--T------TT-------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 266
s Gorilla_beringei.k141_668773                                 844 91 -      1303 A--C--AG-GG-T----------------CTG-GTATTCAGTGCTGGCCAGT-AGGTTGTCGTGGGGCATCCAGAGTGGACACTTTGACGTGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Gorilla_beringei.k141_668773                           C 0 I 38
s Gorilla_gorilla.LT578341.1                                252902 91 - 186649187 A--C--AG-GG-T----------------CTG-GTATTCAGTGCTGGCCAGT-AGGTTGTCGTGGGGCATCCAGAGTGGACACTTTGACGTGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_90206                   11662 35 +     11903 A--T--GG-GA-T----------------TTG-G----------------------------------------------------------------GAGC--AGAg--c-------tg-t-t-a-a-a--c-at--ta--c------tt-------
i Graphiurus_murinus.GraMur_scaffold_90206               C 0 N 0
s Hapalemur_alaotrensis.k141_330369                          13097 39 -     40692 A--T--GG-AG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-TT--TA--T------TT------C
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34498 39 +     49394 A--T--GG-AG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-TT--TA--T------TT------C
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59367 39 -     66874 A--T--GG-AG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-TT--TA--T------TT------C
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8240 39 -     42923 A--T--GG-AG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-TT--TA--T------TT------C
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15240 39 -     53142 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-A---G-TT-A-C-C-AGA--C-AT--TA--T------TT------C
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29193 37 -    327341 G--T-A-G-AA-C----------------CT--G----------------------------------------------------------------GTAC--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT-------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925466 20 -  22651954 A--T--GG-GT-T----------------CTG-G----------------------------------------------------------------GAGC--AGAA--T-----------------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 17
s Hipposideros_galeritus.HipGal_scaffold_23202               49249 39 +     49977 G-TG---G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG--T---T-A-ACAGGC-AT--TA--T------TT------C
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140891 91 -    630532 A--C--GG-GG-T----------------CTG-GTAGTCAGTGCTGGCCAGT-AGGTTGTCGTGGGGTATCCAGAGTGGACACTTCGACGAGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67869 54 +     83186 G--TG--G-AG-CATACTCCACCTATACTCTG-G----------------------------------------------------------------GCAT--AGAG--T-TG-TG-A--A-C-A-G-A--C-AT--TA--T------TC-------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69759 20 +    143317 A--T--GA-GT-T----------------CCT-A----------------------------------------------------------------GAGC--ACAA--T-----------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 20
s Hylobates_agilis.k141_1155965                               3925 91 +     12352 A--C--GG-GG-T----------------CTG-GTAGTCAGTGCTGGCCAGT-AGGTTGTCGTGGGGCACCCAGAGTGGACACTTCGACGAGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11108 91 +     55766 A--C--GG-GG-T----------------CTG-GTAGTCAGTGCTGGCCAGT-AGGTTGTCGTGGGGCACCCAGAGTGGACACTTCGACGAGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050704 91 + 191637585 A--C--GG-GG-T----------------CTG-GTAGTCAGTGCTGGCCAGT-AGGTTGTCGTGGGGCACCCAGAGTGGACACTTCGACGAGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799582 91 +  11177569 A--C--GG-GG-T----------------CTG-GTAGTCAGTGCTGGCCAGT-AGGTTGTCGTGGGGCACCCAGAGTGGACACTTCGACGAGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385179 36 +   7955117 A--T--GA-GA-T----------------TTG-G----------------------------------------------------------------GAGG-AACAG--C----TG--T---T-A-G-A--C-AT--TA--T------GT-------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_2415743                                     750 39 +     11955 A--T--GG-GG-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237592 38 +   9596543 A--T--GA-GA-T----------------TTG-G----------------------------------------------------------------GAGC--AGAG--C----TGGA--AGT-A-G-T--T-AT--TT--T------GT-------
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Lagothrix_lagothricha.k141_246028                          41702 28 +    110728 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60246 41 -     65777 G-TG---G-AT-T----------------CTG-G----------------------------------------------------------------AAAC--TGAG--T----TG-TT-A---ACAGA--C-ATAATA--T------TT------A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757888 39 +  30322482 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-CT-A-C-C-AGA--C-AT--TA--T------TT------C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2619 28 -     13097 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2374 28 +      5940 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2204 28 -      5717 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8568 28 -     11567 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAAC--AGAG--C-----------------------AT--TG--T------GT------C
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9949 28 -     12945 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAAC--AGAG--C-----------------------AT--TG--T------GT------C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7419 39 +     29618 A--T--GG-AG-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7416 39 +     31569 A--T--GG-GG-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7427 39 +     24756 A--T--GG-GG-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7425 39 +     16388 A--T--GG-AG-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811927 38 -   3914936 G--TG--G-AC-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A---ACAGA--C-AT--TG--T------AT-------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16268 39 +     24238 A--T-AGG-GG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAA--C----TG--T-A-G-C-AGA--C-AT--TA--C------TT------C
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331073 28 -   1826925 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8717 34 +     19643 ---------GG-C-----------------TG-G----------------------------------------------------------------GAGC--TCAG--CTA---TTA--A-C-A-G-A--C-AT--TA--T------TT------C
i Loris_lydekkerianus.k141_2031736                       I 2 I 2
s Loris_tardigradus.ctg83                                  5042378 34 -   6120653 ---------GG-C-----------------TG-G----------------------------------------------------------------GAGC--TCAG--CTA---TTA--A-C-A-G-A--C-AT--TA--T------TT------C
i Loris_tardigradus.ctg83                                I 2 I 2
s Loxodonta_africana.GL010049.1                           39078674 39 +  43346337 G--T--GG-CA-T----------------CTG-A----------------------------------------------------------------GAATGGA--G--TAAT-TAG-C-A-G-A------C-TT--TA--T------TT------C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613078 34 +  59628241 G--TG--A-AA-C----------------CTG-G----------------------------------------------------------------GTAT--GGAG--G----TG-TT-AAT-A-G-A--C-AT--T-------------------
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_1757516                              43390 28 -     61512 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371051 28 -  60120075 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23306 28 +     30207 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20409 28 -     24934 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23258 28 +     30527 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34447 28 -     50087 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--CA--T------GT------C
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44218 28 +     51645 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413387 28 - 187317192 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397610 28 +  25927173 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46774 28 -     62418 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23429 28 +     24253 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43249 28 +     59329 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--CA--T------GT------C
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269177 28 +    668171 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--CA--T------GT------C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20364 28 +     21031 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  961 28 +     17132 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221669 39 -    270270 G-TG---G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320461 28 +  24302211 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355293 28 -    752769 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671955 33 -    737560 -----------------------------CTT-G----------------------------------------------------------------GAAT--AGGG-TT----TG-TT-A---ACAGA--C-AT--TA--T------TT------T
i Manis_javanica.JSZB01003497.1                          I 6 C 0
s Manis_pentadactyla.KN006162.1                             219243 33 +    317179 -----------------------------CTT-G----------------------------------------------------------------GAAT--AGGG-TT----TG-TT-A---ACAGA--C-AT--TA--T------TT------T
i Manis_pentadactyla.KN006162.1                          I 6 C 0
s Marmota_marmota.CZRN01000018.1                           7499404 35 +  40650429 A--T--GA-GA-T----------------TTG-G----------------------------------------------------------------GAGA--ACAG--C----TG--T---T-A-G-A--C-AT--TA--T------GT-------
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                       148859 39 +    207569 G-TG---G-AA-T----------------CTG-G----------------------------------------------------------------GAAT--AAAG--C----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24420 38 -     74585 G--TG--G-AC-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A---ACAGA--C-CT--TA--T------AT-------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47061 29 -    140813 -------------------------------A-G----------------------------------------------------------------AAGT--TGAA--CTGG-TGG-C-A---A-A----C-AG--TA--T------AT-------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 6 I 1
s Mesocricetus_auratus.KB708134.1                         17427708 11 +  29670104 -------------------------------A-G----------------------------------------------------------------GAGT--AGAA--C-----------------------------------------------
i Mesocricetus_auratus.KB708134.1                        I 6 I 17
s Mico_argentatus.k141_582562                                 8738 28 +     17804 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9243 28 -     12984 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17557 28 -     26561 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983029 38 +  93316391 A--T--GG-GG-T----------------CTT-G-----------------------------------------------------------------AGC--AGAG--CTGTTCGCAG-A----------C-GT--TA--T------TT------C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43424 39 +    145209 G--C--CA-CA-T----------------CTG-A----------------------------------------------------------------GAAC--A--ACATTAT-TAG-C-A-G-A------C-AT--TA--T------TT------C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183086 39 +    200668 G-TG---G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG-TT-A---ACACA--C-GT--TA--T------TT------A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960828 29 +  27267610 -------------------------------A-G----------------------------------------------------------------GAGT--TGGA--CTGG-TGG-T-A---A-A-A----TG--TA--T------AT-------
i Microtus_ochrogaster.CM001695.1                        I 6 I 1
s Miniopterus_natalensis.LDJU01000034.1                    6361189 39 -   8254450 G-TG---G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG--T---T-A-ACAG-CCAT--TA--T------TT------A
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40090 39 -     48117 G-TG---G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG--T---T-A-ACAG-CCAT--TA--T------TT------A
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         20487 28 -     27822 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6938 38 +     27589 G--TG--G-AC-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------AT-------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50820 39 -     62432 A--T--GG-GG-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-AAT-A-G-A--C-GT--TA--T------TT------C
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177240 42 +    366855 GGTGGA-G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--C----TG--T---T-A-ACAGGC-AT--CA--T------TT------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16946 37 -     63510 G--T-A-G-AA-C----------------CT--G----------------------------------------------------------------GTAC--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT-------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37115 45 +     47283 G-TG---G-AT-T----------------CTG-G----------------------------------------------------------------AAAC--TGAG--T----TG-TT-A---ACAGA--C-GT--TG--T------TTACTAGTA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   5137 29 +      5579 -------------------------------A-G----------------------------------------------------------------AATT--TGAA--TTAG-TGG-C-A---A-A----C-AG--TA--T------AT-------
i Mus_caroli.FMAL02030609.1                              I 6 I 1
s Mus_musculus.chr8                                       41685840 29 + 129401213 -------------------------------A-G----------------------------------------------------------------AATT--TGAA--TTAG-TGG-C-A---A-A----C-AG--TA--T------AT-------
i Mus_musculus.chr8                                      I 6 I 1
s Mus_spretus.CM004101.1                                  39495158 29 + 130317789 -------------------------------A-G----------------------------------------------------------------AATT--TGAA--TTAG-TGG-C-A---A-A----C-AG--TA--T------AT-------
i Mus_spretus.CM004101.1                                 I 6 I 1
s Muscardinus_avellanarius.MusAve_scaffold_12866             80932 35 -     86153 A--T--GG-GA-T----------------CTG-G----------------------------------------------------------------AAGC--TAAA--C----TG--T---T-A-G-A--c-at--ta--t------tt-------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 295
s Mustela_putorius.JH418006.1                             14353572 38 +  14710649 G--TG--G-AC-C----------------TTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A---ACAGA--C-CT--TA--T------AT-------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791160 45 +  10118263 G-TG---G-AT-T----------------CTG-G----------------------------------------------------------------AAAC--TGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TTGCTAGTA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385522 45 +   6019432 G-TG---G-AT-T----------------CTG-G----------------------------------------------------------------AAAC--TGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TTGCTAGTA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381342 45 +   4330536 G-TA---G-AT-T----------------CTG-G----------------------------------------------------------------AAAC--TGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TTGCTAGTA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          171 45 +     18357 G-TG---G-AT-T----------------CTG-G----------------------------------------------------------------AAAC--TGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TTGCTAGTA
i Myotis_myotis.MyoMyo_scaffold_66571                    N 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118003 39 +    130748 T--T--GC-CG-T----------------GAG-G----------------------------------------------------------------GAAC--AGAG--T----TGTA--A-G-C-AGA--C-AA--TA--T------TT------C
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              27071 28 +     34575 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467530 38 -  31847680 G--TG--G-AC-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------AT-------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126051 39 -    149072 G-TG---G-AG-T----------------CTG-G----------------------------------------------------------------CAAC--AAAA--C----TG-TT-A---ACAGA--C-AT--CA--T------TT------A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51814 91 -    132029 A--T--GG-GG-T----------------CTG-GTAGTCAGTGCTGGCCAGT-AGGTTGTCGTGGGGCACCCAGAGTGGACACTTCGACGAGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               7909 91 -     16345 A--C--GG-GG-T----------------CTG-GTAGTCAGTGCTGGCCAGT-AGGTTGTCGTGGGGCACCCAGAGTGGACACTTCGACGAGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13794 91 +     22201 A--C--GG-GG-T----------------CTG-GTAGTCAGTGCTGGCCAGT-AGGTTGTCGTGGGGCACCCAGAGTGGACACTTTGACGAGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412025 81 -  22158432 ---------------------------------GTAGTCAGTGCTGGCCAGT-AGGTTGTCGTGGGGCACCCAGAGTGGACACTTCGACGAGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24192 91 -     54323 A--C--GG-GG-T----------------CTG-GTAGTCAGTGCTGGCCAGT-AGGTTGTCGTGGGGCACCCAGAGTGGACACTTCGACGAGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196680 33 +   9404916 G--TG--A-AA-C----------------CTG-G----------------------------------------------------------------GTA---AGGG--G----TG-TT-AAT-A-G-A--C-AT--T-------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                             93634729 34 + 196305487 ---------GG-C-----------------TG-G----------------------------------------------------------------GAGC--TCAG--CTA---TTA--A-C-A-G-A--C-AT--TA--T------TT------C
i Nycticebus_bengalensis.LG01                            I 2 I 2
s Nycticebus_coucang.k141_3846325                             1487 34 -      3937 ---------GG-C-----------------TG-G----------------------------------------------------------------GAGC--TCAG--CTA---TTA--A-C-A-G-A--C-AT--TA--T------TT------C
i Nycticebus_coucang.k141_3846325                        I 2 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93562968 34 - 199412804 ---------GG-C-----------------TG-G----------------------------------------------------------------GAGC--TCAG--CTA---TTA--A-C-A-G-A--C-AT--TA--T------TT------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 2 I 2
s Ochotona_princeps.JH802162.1                             2549647 38 -   3988456 G--T--GG-GG-T----------------CTA-G----------------------------------------------------------------GAGC--AGAG--CTAT-AGCAG-A----------C-AT--AA--C------TT------A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045911 20 -  11899542 A--T--GA-CT-T----------------CCT-G----------------------------------------------------------------GAGC--AGGA--T-----------------------------------------------
i Octodon_degus.JH651603.1                               C 0 I 20
s Odobenus_rosmarus.KB229312.1                             1450126 38 +   2017862 G--TG--G-AC-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------AT-------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91188 29 -    140218 -------------------------------C-G----------------------------------------------------------------GAGT--TGGA--CTGG-TGG-T-A---A-A----T-GG--TA--T------AT-------
i Ondatra_zibethicus.OndZib_scaffold_7387                I 6 I 1
s Onychomys_torridus.OnyTor_scaffold_28377                    1562 29 -     41509 -------------------------------A-G----------------------------------------------------------------GAGT--TGAA--C----TGG-TGA-T-A-A-A--C-AG--TA--T------AT-------
i Onychomys_torridus.OnyTor_scaffold_28377               I 6 I 1
s Orycteropus_afer.OryAfe_flattened_line_171931              11792 37 -     14239 G--T--GA-CA-T----------------CTG-A----------------------------------------------------------------AAAC--A--G--TTAT-TAG-C-A-G-A------C-AC--TA--A------TT------C
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102102 39 - 174332312 A--T-AGG-GG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAA--CTGC-AGCAG-A----------C-AT--TA--C------TT------C
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37717 34 +    559221 G--TG--A-AA-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--G----TG-TT-AAT-A-G-A--C-AT--T-------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_649260                        38111 35 -     51505 ---------GG-C----------------CTG-G----------------------------------------------------------------GAGC--TCAG--CTA---TTA--A-C-A-G-A--C-AT--TA--T------TT------C
i Otolemur_crassicaudatus.k141_649260                    I 2 I 2
s Otolemur_garnettii.GL873799.1                             351114 35 +   1103335 ---------GG-C----------------CTG-G----------------------------------------------------------------GAGC--TCAG--CTA---TTA--A-C-A-G-A--C-AT--TA--T------TT------C
i Otolemur_garnettii.GL873799.1                          I 2 I 2
s Pan_troglodytes.NBAG03003330.1                             10442 91 -     21856 A--C--AG-GG-T----------------CCG-gtagTCAGTGCTGGCCAGT-AGGTTGTCGTGGGGCACCCAGAGTGGACACTTTGACGTGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Pan_troglodytes.NBAG03003330.1                         n 124 n 124
s Panthera_onca.PanOnc_flattened_line_3271                   22874 38 -    230217 G--T-A-G-AG-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT-------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460200 38 -  18783137 G--T-A-G-AG-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT-------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970920 38 +   8748460 G--T-A-G-AG-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT-------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241301 28 - 183742232 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7765 28 +     21308 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288804 28 -  20919399 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20420 28 -     27687 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13556 28 +     16796 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20366 28 -     23640 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13512 38 +     78924 G--T-A-A-AG-C----------------CTG-T----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A-A-A-AGA--C-AA--TA--T------TT-------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24395 36 +     31479 ---------GGCC-----------------TG-G----------------------------------------------------------------GAGC--TCAG--CTA-----AT-A---ACAGA--C-AT--TA--T------TT-C----T
i Perodicticus_ibeanus.k141_1921260                      I 2 I 2
s Perodicticus_potto.k141_1854441                            16754 36 -     24908 ---------GGCC-----------------TG-G----------------------------------------------------------------GAGC--TCAG--CTA---TTA--A-C-A-G-A--C-AT--TA--T------TT-C----T
i Perodicticus_potto.k141_1854441                        I 2 I 2
s Perognathus_longimembris.PerPac_flattened_line_28053       37987 38 +     38305 G--T--GG-GA-T----------------CTA-G----------------------------------------------------------------GAGC--AGAG--TTGT-TAG-C-A-T-A------T-AC---A--T-----GCT-------
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245280 29 +  18517816 -------------------------------A-G----------------------------------------------------------------GAGT--TGAA--C----TGG-TGA-T-A-A-A--C-AG--TA--T------AT-------
i Peromyscus_maniculatus.KI615324.1                      I 6 I 1
s Petromus_typicus.PetTyp_scaffold_17301                     30368 20 -     56120 A--T--GG-GT-T----------------CTG-G----------------------------------------------------------------GAGC--AGAA--T-----------------------------------------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 20
s Piliocolobus_badius.k141_2704958                             587 28 +     55023 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                            0 28 -     89929 A--T--GG-GG-T----------------CTC-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Piliocolobus_gordonorum.k141_381342                    N 0 C 0
s Piliocolobus_kirkii.k141_1310104                             588 28 +     40849 A--T--GG-CG-T----------------CTC-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252336 28 +  14605196 A--T--GG-GG-T----------------CTC-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1295 39 +     22231 G-TG---G-AT-T----------------TTG-G----------------------------------------------------------------AAAC--TGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63339 28 +    207309 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--C------GT------C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4433 28 -     25401 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30174 28 +     58159 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30450 28 +     63561 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30213 28 +     51148 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555180 28 -   4542175 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30197 28 +     51125 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6603 28 +     39866 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--C------AT------C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1688 28 -      9282 G--T--GG-GG-T----------------CTA-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--C------GT------C
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41092 28 -     87950 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--C------GT------C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41485 28 -     88961 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--C------GT------C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6184 28 -     39403 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--C------AT------C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41136 28 +     87928 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--C------AT------C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6181 28 -     60166 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--C------GT------C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13117 28 -     67232 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--C------AT------C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41033 28 -     90634 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--C------GT------C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42501 28 +     89403 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--C------GT------C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176035 91 - 189387572 A--T--GG-GG-T----------------CTG-GTAGTCAGTGTTTGCCAGT-AGGTTGTCATGGGGCACCCAGAGTGGACACTTCCACGTGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190853 91 -   9816681 A--T--GG-GG-T----------------CTG-GTAGTCAGTGCTTGCCAGT-AGGTTGTCATGGGGCACCCAGAGTGGACACTTCCACGTGGTCTGGGAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25720 28 +     69807 A--T--GG-TG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42915 28 -     80239 A--T--GG-TG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981044 39 +   4620579 A--T--GG-CA-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-AT--TA--T------TT------C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564511 39 -   2598838 A--C--GG-GG-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2147 39 -      7103 A--T--GG-GG-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2744 39 -     11706 A--T--GG-GG-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A---ACAGA--C-AT--TG--T------TT------C
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6480 39 -     30655 A--T--GG-GG-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32805 39 +     46564 A--T--GG-GG-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93076 39 -     98465 A--T--GG-GG-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6713 39 +     35169 A--C--GG-GG-T----------------CTT-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34599 29 +     52041 -------------------------------A-G----------------------------------------------------------------AAGT--TGAA--C----TGG-TGA-C-A-A-A--C-AG--TA--T------AT-------
i Psammomys_obesus.NESX01036366.1                        I 6 I 1
s Pteronotus_parnellii.KE847780.1                            50167  2 -     66298 ------------------------------------------------------------------------------------------------------------------------------------------------------T------A
i Pteronotus_parnellii.KE847780.1                        I 13 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3137 38 -     18639 G--TG--G-AC-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A---ACAGA--C-CT--TA--T------AT-------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839298 39 -  28871421 G-TG---G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535865 39 -   4952924 G-TG---G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG-TT-A---ACAGA--C-AT--CA--T------TT------C
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097516 35 +  38429054 G--T-A-G-AG-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--TTAA-CAGA-------------C-AT--TA--T------TT-------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25095 28 +     91421 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151588 28 -   7812017 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5965 28 +     72585 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021051 29 -  90668790 -------------------------------A-G----------------------------------------------------------------AAGT--TGAA--TTGG-TGG-C-A---A-A----C-AG--ta--t------at-------
i Rattus_norvegicus.chr16                                I 6 I 1
s Rhinolophus_sinicus.LVEH01000134.1                       2913262 39 +   3329780 G-TG---G-AA-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG--T---T-A-ACAGGC-AT--TA--T------TT------C
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26905 28 +     27361 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120272 28 + 195417433 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234513 28 -   7961872 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73281 39 -    116970 G-TG---G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT------C
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2481 28 +     27962 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2376 28 +      6077 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2468 28 +      5971 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2410 28 +      5932 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               733 28 -      4390 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390165 28 - 209938924 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2358 28 +      5979 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3099 28 -      4301 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236762 28 +   5703754 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6352 28 +     21866 A--T--GG-GG-C----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114454 37 +    313613 ------TG-AG-T----------------CTG-G----------------------------------------------------------------GGAT--GGCA--T----TG--T---T-A-ACAG-CGAT--TA--C------TT------G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_158471                         23412 28 +     27374 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26931 28 +     58920 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13427 28 -     45317 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21085 28 -     42441 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23765 28 -     29113 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26834 28 -     48123 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47131 29 +     77746 -------------------------------A-A----------------------------------------------------------------GAGT--TGAA--ATAC-TG-AT-A---A-A----C-AG--TA--T------AT-------
i Sigmodon_hispidus.SigHis_scaffold_20193                I 6 I 36
s Solenodon_paradoxus.SolPar_flattened_line_126            1856782 39 -   1910179 G--T--GG-AG-C----------------CTG-G----------------------------------------------------------------GAAC--AGAG--T----TG-TT-A---ACAGA--C-AT--TC--T------TT------C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866762 35 +   3870691 A--T--GA-GA-T----------------TTG-G----------------------------------------------------------------GAGA--ACAG--C----TG--T---T-A-G-A--C-AT--TA--T------GT-------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525              4924 31 -     97271 ---------AC-C----------------CTG-G----------------------------------------------------------------GTAT--GGAA--TTAA-CAGA-------------C-AT--TA--T------AT-------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123357 33 +    196729 ---------AA-C----------------CT--G----------------------------------------------------------------GTAC--AGAG--T----TG--T---T-A-ACAGTC-GT--TA--T------TT-------
i Suricata_suricatta.SurSur_flattened_line_6629          I 4 C 0
s Symphalangus_syndactylus.tarseq_199                       389355 24 +   1523678 -------------------------------------------------------------------------------------------GGTCTGGGAGC--AAAG--C-----------------------AT--TA--T------GT------C
i Symphalangus_syndactylus.tarseq_199                    I 4 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12103 39 +     22964 A-TG---G-AG-T----------------CTA-G----------------------------------------------------------------GAAC--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------TT------A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1124 39 +      5583 G--T--GC-CG-T----------------GAG-G----------------------------------------------------------------GAAC--AGAG--T----TGTA--A-G-C-AGA--C-AT--TA--T------TT------C
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190037 39 +    199430 G--TG--G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--TC-C--TTA--A-C-A-G-A--C-AT--TA--T------TT------T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    103988 39 -    539355 G--TG--G-AG-T----------------CTG-G----------------------------------------------------------------GAAC--AGAG--TC----G-TT-A---ACAGA--C-AT--TA--T------TT------T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5347 32 +      6850 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-A-------------C-AT--TA--T------TT------C
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5388 39 +     20590 G--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--CTGT-TAGCT---G-A------C-AT--TA--T------TT------C
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351287 28 - 186847797 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TA--T------GT------C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22695 20 -     33621 A--T--GG-GT-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 20
s Tolypeutes_matacus.TolMat_scaffold_31955                   18259 39 -     31044 G--T--GG-GG-T----------------GTG-G----------------------------------------------------------------GTAC--AAAG--C----TG-TT-A-G-C-AGA--C-GT--TA--C------TT------C
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478147 39 -    610378 G-TG---G-AG-T----------------CAG-G----------------------------------------------------------------GAAC--AGAG--T-TG-TG-A--A-C-A-G-A--C-AG--CA--T------TT------A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 2
s Trachypithecus_auratus.k141_1189070                        18976 28 +     26378 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31640 28 -     78344 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18297 28 +     25722 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26591 28 -     62838 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Trachypithecus_francoisi.k141_1453105                  I 69 C 0
s Trachypithecus_geei.k141_1001272                           26639 28 +     46913 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7445 28 -     28527 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28530 28 -     64340 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Trachypithecus_hatinhensis.k141_31479                  I 69 C 0
s Trachypithecus_laotum.k141_928651                          26567 28 -     63452 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Trachypithecus_laotum.k141_928651                      I 69 C 0
s Trachypithecus_leucocephalus.k141_96450                     8010 28 +     22490 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Trachypithecus_leucocephalus.k141_96450                I 69 C 0
s Trachypithecus_melamera.k141_591572                         1369 28 -      6147 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8343 28 -     13050 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253582 28 -   6242583 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59333 28 +     59866 A--T--GG-CG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C-----------------------AT--TG--T------GT------C
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     657 36 -     21056 ------TG-AGTT----------------CTA-G----------------------------------------------------------------GAAT--GATA--T----TG--T-A---A-ACA--T-AT--TA--C------TT------A
i Uropsilus_gracilis.UroGra_scaffold_46687               I 1 I 1
s Ursus_maritimus.KK499267.1                                180287 19 +   5085361 G--AG--G-AC-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--------------------------------------------------
i Ursus_maritimus.KK499267.1                             C 0 I 18
s Varecia_rubra.k141_787544                                  23689 39 -     30710 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-AT--TA--T------TT------C
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22596 39 -    147434 A--T--GG-GG-T----------------CTG-G----------------------------------------------------------------GAGC--AGAG--C----TG-TT-A-C-C-AGA--C-AT--TA--T------TT------C
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103439 34 -    112863 G--TG--A-AA-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--G----TG-TT-AAT-A-G-A--C-AT--T-------------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 1
s Xerus_inauris.XerIna_scaffold_2302                        172540 35 -    224448 A--T--GA-GA-T----------------CTG-G----------------------------------------------------------------GAGG--AGAG--C----TG--T---T-A-G-A--C-AT--TA--T------TT-------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732         27324 38 -     86975 G--TG--G-AC-C----------------CTG-G----------------------------------------------------------------GTAT--AGAG--T----TG-TT-A---ACAGA--C-AT--TA--T------AT-------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1786 38 +      2695 A--G--GG-GA-T----------------TTG-G----------------------------------------------------------------AAGC--AGAA--C----TGG-T-C-G-T-C-G--CTAT--TT--T------AT-------
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 1
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508  0 -   4065304 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786  8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3643  6 +     36723 CA---C--T-----C-----T
s Acinonyx_jubatus.LLWD01001279.1                           811291  6 +   1699592 TA---C--T-----C-----C
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18517  6 +     63021 CA---T--T-----T-----T
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413818  6 +  29979442 TA---C--T-----C-----T
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 18 C 0
s Ailurus_fulgens.LNAC01001112.1                            213928  6 +    347723 TA---C--T-----C-----T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16443  6 -     61208 CA---T--T-----T-----T
i Allactaga_bullata.AllBul_scaffold_20030                I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45969  6 +     53615 CA---C--T-----C-----T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41913  6 +     44087 CA---C--T-----C-----T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14551  6 -     21945 CA---C--T-----C-----T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16223  6 +     32033 CA---C--T-----C-----T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70676  6 -     84148 CA---C--T-----C-----T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42909  6 -     78289 CA---C--T-----C-----T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42355  6 +     55831 CA---C--T-----C-----T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40796  6 -     64179 CA---C--T-----C-----T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22443  6 -     24835 CA---C--T-----C-----T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39426  6 +     45454 CA---C--T-----C-----T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45124  6 +     70886 CA---C--T-----C-----T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7249  6 +     30854 CA---C--T-----C-----T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31388  6 +     42133 CA---C--T-----C-----T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175150  6 -    412891 TA---C--T-----T-----T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49191  6 -     65372 CA---C--T-----C-----T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42945  6 +     43593 CA---C--T-----C-----T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670958  6 +   5030052 CA---C--T-----C-----T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22600  6 -     23494 CA---C--T-----C-----T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7736  6 +      8415 CA---C--T-----C-----T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14478  6 -     32367 TA---C--T-----T-----T
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3440  6 -     15198 TA---C--T-----C-----T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273188  6 +  21539123 CA---T--T-----C-----T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9354  6 +     48076 CA---C--T-----C-----T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4491  6 -     28759 CA---C--T-----C-----T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32045  6 +     44353 CA---T--T-----C-----T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47415  6 -     71267 CA---C--T-----C-----T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21475  6 -     33135 CA---C--T-----C-----T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4666  6 +     11645 TG---T--T-----C-----T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4672  6 -     19611 TG---T--T-----C-----T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6380  6 +     28062 CA---G--T-----C-----T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41674  6 -     91139 CA---G--T-----C-----T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19200  6 +     95584 CA---G--T-----C-----T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19113  6 +    119600 CA---G--T-----C-----T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8659  6 +     18648 CA---C--T-----C-----T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8197  6 -     13885 CA---C--T-----C-----T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             265  6 -      8861 CA---C--T-----C-----T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452658  6 + 189096842 CA---C--T-----C-----T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                181  6 +      8664 CA---C--T-----C-----T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42503844  6 +  60362399 TA---T--G-----C-----T
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7480  6 -     23171 TA---T--G-----C-----T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220823  6 +   9314153 TA---T--G-----C-----T
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            41613958  6 +  59632846 TA---T--G-----C-----T
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            45105539  6 -  63665305 TA---T--G-----C-----T
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Carlito_syrichta.NW_007259797.1                           268747  6 +    496798 CA---C--T-----C-----T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3732  6 +      5315 TA---C--T-----C-----T
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20155  6 -     39886 TA---C--C-----T-----T
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 9
s Cavia_aperea.AVPZ01000300.1                              4994411  4 +  23392119 -----C--T-----T-----T
i Cavia_aperea.AVPZ01000300.1                            I 10 I 4
s Cavia_porcellus.DS562891.1                               4997853  4 +  23407841 -----C--T-----T-----T
i Cavia_porcellus.DS562891.1                             I 10 I 4
s Cavia_tschudii.CavTsc_scaffold_23560                       60954  4 -     66877 -----C--T-----T-----T
i Cavia_tschudii.CavTsc_scaffold_23560                   I 10 I 4
s Cebuella_niveiventris.k141_592277                           3578  6 -     12580 CG---C--T-----T-----T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41633  6 +     53515 CG---C--T-----C-----T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369571  6 -  26074798 CA---C--T-----C-----T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6460  6 -     34880 CA---C--T-----C-----T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65555  6 -     89041 CA---C--T-----C-----T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          671  6 -      5494 CA---C--T-----C-----T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490623  6 -  27778364 CA---C--T-----C-----T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17456  6 +     27315 CA---C--T-----C-----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139148  6 -   4669795 CA---C--T-----C-----T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42888  6 +     47900 CA---C--T-----C-----T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42721  6 -     44860 CA---C--T-----C-----T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42704  6 -    148725 CA---C--T-----C-----T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9961  6 -     17524 TA---C--T-----C-----T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25683  6 -     34525 TA---C--T-----C-----T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30159  6 -     45857 CA---C--T-----C-----T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23652  6 +     70610 CA---C--T-----C-----T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20577  6 +     36323 TA---C--T-----C-----T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11270  6 -     19938 CT---C--T-----C-----C
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29101  6 -     33796 TG---T--T-----C-----T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3617  6 -     15404 TG---T--T-----C-----T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7462  6 -     32913 CA---C--T-----C-----T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17875  6 -     40346 CA---C--T-----C-----T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18130  6 +    216457 CA---C--T-----C-----T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17923  6 +     39636 CA---C--T-----C-----T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2511  6 +      5346 CA---C--T-----C-----T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41009  6 -    112038 CA---G--T-----C-----T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6581  6 +     34062 CA---G--T-----C-----T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341474  6 +  18827391 CA---C--T-----C-----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8019  6 -     44032 CA---C--T-----C-----T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302799  6 - 135778131 CA---C--T-----C-----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10323  6 +     15858 CA---C--T-----C-----C
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601899  6 -    839153 CA---C--T-----C-----C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407240  6 -   2368649 CG---C--G-----C-----T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377118  6 - 200372422 CG---C--G-----C-----T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                665  6 -     84244 CG---C--G-----C-----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805700  6 +  53390261 CA---C--T-----C-----T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1212  6 -      8242 CA---T--T-----C-----T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 17 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40722  6 -     83289 CT---T--T-----T-----T
i Cricetomys_gambianus.CriGam_scaffold_14425             I 1 C 0
s Cricetulus_griseus.LT883664.1                          213113185  6 - 224834208 CA---C--T-----T-----T
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2744  6 +     87169 TA---G--T-----C-----T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643217  6 -   1526836 CA---C--T-----T-----T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3445  5 +     50838 -A---G--T-----T-----T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 20 I 4
s Cuniculus_paca.CunPac_flattened_line_7025                   2300  5 +     36344 -A---A--T-----T-----T
i Cuniculus_paca.CunPac_flattened_line_7025              I 20 I 4
s Dasypus_novemcinctus.JH564415.1                          2108611  6 -   2246927 CA---T--G-----C-----C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291037  6 +  12879189 TG---T--T-----C-----C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863182  6 -  20541912 TA---C--T-----C-----T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662915  6 -   1390856 CA---C--T-----C-----T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137700  6 -    198055 CA---C--T-----C-----T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96920  5 -    115145 -A---C--T-----T-----T
i Dinomys_branickii.DinBra_scaffold_10381                I 20 I 20
s Dipodomys_ordii.KN672350.1                              18948782  6 -  37912305 CA---C--T-----T-----T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3729  6 -     10735 TA---C--T-----T-----T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8364  5 +     14636 -A---C--T-----T-----T
i Dolichotis_patagonum.DolPat_scaffold_80628             I 20 I 4
s Echinops_telfairi.JH980293.1                            62852368  6 - 111700974 CA---C--T-----T-----C
i Echinops_telfairi.JH980293.1                           C 0 I 5
s Eidolon_helvum.AWHC01266696.1                               4745  6 +     19438 CA---C--T-----C-----T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105909  6 -  10337057 CA---C--T-----C-----T
i Elephantulus_edwardii.JH947257.1                       N 0 I 5
s Ellobius_lutescens.LOEQ01008920.1                          29447  6 +    110024 TG---C--T-----T-----T
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01026522.1                           11421  6 +     18970 TG---C--T-----T-----T
i Ellobius_talpinus.LOJH01026522.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               24914574  6 +  41312741 TA---C--T-----C-----T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576811  6 +  14770903 TA---C--T-----C-----T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039907  6 -   4378816 CA---C--T-----C-----C
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373841  6 +  39960074 CA---C--T-----C-----C
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410627  6 -    498745 CA---C--T-----C-----C
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               260997  6 +  21539334 CA---C--T-----C-----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13209  6 -     24895 TG---T--T-----C-----T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40918  6 -     70999 TG---T--T-----C-----T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84880  6 +    112731 TG---T--T-----C-----T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41453  6 +     68309 TG---T--T-----C-----T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51775  6 -     65740 TG---T--T-----C-----T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22408  6 -     75513 TG---T--T-----C-----T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46601  6 -     97555 TG---T--T-----C-----T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3328  6 +     30972 TG---T--T-----C-----T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41048  6 -     52037 TG---T--T-----C-----T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57452  6 -    111500 TG---T--T-----C-----T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245203  6 - 206538554 TA---C--T-----C-----C
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114989  6 - 205367284 TA---C--T-----C-----C
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26091  6 -     30238 TA---C--T-----C-----C
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122995  3 -    137831 --------T-----C-----T
i Galago_moholi.ctg3793                                  I 2 C 0
s Galago_senegalensis.k141_991736                             6540  3 +     22493 --------T-----C-----T
i Galago_senegalensis.k141_991736                        I 2 C 0
s Galagoides_demidoff.k141_561628                            18592  3 -     32986 --------T-----C-----T
i Galagoides_demidoff.k141_561628                        I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17521  6 +     18121 CA---C--T-----C-----T
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32647  6 -     36801 CA---C--G-----T-----T
i Glis_glis.GliGli_scaffold_33859                        I 266 C 0
s Gorilla_beringei.k141_3358147                               3982  6 -      8343 CA---C--T-----C-----T
i Gorilla_beringei.k141_3358147                          I 116 C 0
s Gorilla_gorilla.LT578341.1                                252993  6 - 186649187 CA---C--T-----C-----T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     142  6 -     78134 ca---c--t-----t-----t
i Graphiurus_murinus.GraMur_scaffold_10447               N 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13136  6 -     40692 TG---T--T-----C-----T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34537  6 +     49394 TG---T--T-----C-----T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59406  6 -     66874 TG---T--T-----C-----T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8279  6 -     42923 TG---T--T-----C-----T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15279  6 -     53142 TG---T--T-----C-----T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29230  6 -    327341 TA---C--T-----C-----T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925503  5 -  22651954 -A---C--T-----T-----T
i Heterocephalus_glaber.JH602082.1                       I 17 I 4
s Hipposideros_galeritus.HipGal_scaffold_23202               49288  6 +     49977 CA---C--T-----C-----T
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    140982  6 -    630532 CA---C--T-----C-----T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67923  6 +     83186 TA---G--T-----C-----T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69799  5 +    143317 -A---C--T-----T-----T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 20 I 4
s Hylobates_agilis.k141_1155965                               4016  6 +     12352 CA---C--T-----C-----T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11199  6 +     55766 CA---C--T-----C-----T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050795  6 + 191637585 CA---C--T-----C-----T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799673  6 +  11177569 CA---C--T-----C-----T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385216  6 +   7955117 CC---C--T-----G-----T
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_2415743                                     789  6 +     11955 TG---T--T-----C-----T
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237631  6 +   9596543 CA---G--C-----T-----T
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Lagothrix_lagothricha.k141_246028                          41730  6 +    110728 CA---C--T-----C-----T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60287  6 -     65777 TA---C--T-----C-----T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757927  6 +  30322482 TG---T--T-----C-----T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2647  6 -     13097 CA---C--T-----C-----T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2402  6 +      5940 CA---C--T-----C-----T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2232  6 -      5717 CA---C--T-----C-----T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8596  6 -     11567 CA---C--T-----C-----T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9977  6 -     12945 CA---C--T-----C-----T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7458  6 +     29618 TG---T--T-----C-----T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7455  6 +     31569 TG---T--T-----C-----T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7466  6 +     24756 TG---T--T-----C-----T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7464  6 +     16388 TG---T--T-----C-----T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811965  6 -   3914936 TA---C--T-----C-----T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16307  6 +     24238 TA---T--T-----C-----T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331101  6 -   1826925 CA---C--T-----C-----T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8753  3 +     19643 --------T-----C-----T
i Loris_lydekkerianus.k141_2031736                       I 2 C 0
s Loris_tardigradus.ctg83                                  5042414  3 -   6120653 --------T-----C-----T
i Loris_tardigradus.ctg83                                I 2 C 0
s Loxodonta_africana.GL010049.1                           39078713  6 +  43346337 CA---C--T-----C-----T
i Loxodonta_africana.GL010049.1                          C 0 I 159
s Lycaon_pictus.CM007581.1                                41613113  6 +  59628241 TA---T--G-----C-----T
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_1757516                              43418  6 -     61512 CA---C--T-----C-----T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371079  6 -  60120075 CA---C--T-----C-----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23334  6 +     30207 CA---C--T-----C-----T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20437  6 -     24934 CA---C--T-----C-----T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23286  6 +     30527 CA---C--T-----C-----T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34475  6 -     50087 CA---C--T-----C-----T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44246  6 +     51645 CA---C--T-----C-----T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413415  6 - 187317192 CA---C--T-----C-----T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397638  6 +  25927173 CA---C--T-----C-----T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46802  6 -     62418 CA---C--T-----C-----T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23457  6 +     24253 CA---C--T-----C-----T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43277  6 +     59329 CA---C--T-----C-----T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269205  6 +    668171 CA---C--T-----C-----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20392  6 +     21031 CA---C--T-----C-----T
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  989  6 +     17132 CA---C--T-----C-----T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221708  6 -    270270 CA---C--T-----C-----T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320489  6 +  24302211 CA---C--T-----C-----T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355321  6 -    752769 CA---C--T-----C-----T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671988  6 -    737560 CA---G--A-----C-----T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219276  6 +    317179 CA---G--A-----C-----T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499440  6 +  40650429 CC---C--T-----G-----T
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148898  6 +    207569 TA---T--T-----C-----T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24458  6 -     74585 TA---C--T-----C-----T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47091  6 -    140813 CA---T--T-----T-----T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 C 0
s Mesocricetus_auratus.KB708134.1                         17427736  6 +  29670104 AA---C--T-----T-----T
i Mesocricetus_auratus.KB708134.1                        I 17 C 0
s Mico_argentatus.k141_582562                                 8766  6 +     17804 CA---C--T-----C-----T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9271  6 -     12984 CA---C--T-----C-----T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17585  6 -     26561 CA---C--T-----C-----T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983067  6 +  93316391 TG---T--T-----C-----T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43463  6 +    145209 TG---C--T-----T-----C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_2233                183125  6 +    200668 TA---C--T-----C-----T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960858  6 +  27267610 TG---C--T-----T-----T
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361228  6 -   8254450 TA---C--T-----C-----T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40129  6 -     48117 TA---C--T-----C-----T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20515  6 -     27822 CA---C--T-----C-----T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6976  6 +     27589 TA---C--T-----C-----T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50859  6 -     62432 TG---T--T-----C-----T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177282  6 +    366855 CG---C--T-----C-----T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16983  6 -     63510 TA---C--T-----C-----T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37160  6 +     47283 TA---C--T-----C-----T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   5167  6 +      5579 CA---T--T-----T-----T
i Mus_caroli.FMAL02030609.1                              I 1 C 0
s Mus_musculus.chr8                                       41685870  6 + 129401213 CA---T--T-----T-----T
i Mus_musculus.chr8                                      I 1 C 0
s Mus_spretus.CM004101.1                                  39495188  6 + 130317789 CA---T--T-----T-----T
i Mus_spretus.CM004101.1                                 I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81262  6 -     86153 TA---G--T-----T-----T
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 295 C 0
s Mustela_putorius.JH418006.1                             14353610  6 +  14710649 TA---C--T-----T-----T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791205  6 +  10118263 TA---C--T-----C-----T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385567  6 +   6019432 TA---C--T-----C-----T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381387  6 +   4330536 TA---C--T-----C-----T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          216  6 +     18357 TA---C--T-----C-----T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118042  6 +    130748 CA---C--T-----C-----C
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              27099  6 +     34575 CA---C--G-----C-----T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467568  6 -  31847680 TA---C--T-----C-----T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126090  6 -    149072 TA---G--T-----C-----T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51905  6 -    132029 CA---C--T-----C-----T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8000  6 -     16345 CA---C--T-----C-----T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13885  6 +     22201 CA---C--T-----C-----T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412106  6 -  22158432 CA---C--T-----C-----T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24283  6 -     54323 CA---C--T-----C-----T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196714  6 +   9404916 TA---T--G-----C-----T
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                             93634765  3 + 196305487 --------T-----C-----T
i Nycticebus_bengalensis.LG01                            I 2 C 0
s Nycticebus_coucang.k141_3846325                             1523  3 -      3937 --------T-----C-----T
i Nycticebus_coucang.k141_3846325                        I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563004  3 - 199412804 --------T-----C-----T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 2 C 0
s Ochotona_princeps.JH802162.1                             2549685  6 -   3988456 TA---C--T-----T-----T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045951  5 -  11899542 -A---G--T-----T-----T
i Octodon_degus.JH651603.1                               I 20 I 4
s Odobenus_rosmarus.KB229312.1                             1450164  6 +   2017862 TA---C--C-----C-----T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91218  6 -    140218 TG---C--T-----T-----T
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1592  6 -     41509 CA---T--T-----T-----T
i Onychomys_torridus.OnyTor_scaffold_28377               I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11829  6 -     14239 CA---C--T-----C-----T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 33
s Oryctolagus_cuniculus.CM000791.1                       107102141  6 - 174332312 TA---T--T-----C-----T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37752  6 +    559221 TA---T--G-----C-----T
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_649260                        38148  3 -     51505 --------T-----C-----T
i Otolemur_crassicaudatus.k141_649260                    I 2 C 0
s Otolemur_garnettii.GL873799.1                             351151  3 +   1103335 --------T-----C-----T
i Otolemur_garnettii.GL873799.1                          I 2 C 0
s Pan_troglodytes.NBAG03003091.1                             10541  9 -     26668 CACATC--T-----T-----T
i Pan_troglodytes.NBAG03003091.1                         I 139 I 82
s Panthera_onca.PanOnc_flattened_line_3271                   22912  6 -    230217 TA---C--T-----C-----C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460238  6 -  18783137 TA---C--T-----C-----C
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970958  6 +   8748460 TA---C--T-----C-----C
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241329  6 - 183742232 CA---C--T-----C-----T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7793  6 +     21308 CA---C--T-----C-----T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288832  6 -  20919399 CA---C--T-----C-----T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20448  6 -     27687 CA---C--T-----C-----T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13584  6 +     16796 CA---C--T-----C-----T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20394  6 -     23640 CA---C--T-----C-----T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13550  6 +     78924 TA---C--T-----C-----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24433  3 +     31479 --------T-----C-----T
i Perodicticus_ibeanus.k141_1921260                      I 2 C 0
s Perodicticus_potto.k141_1854441                            16792  3 -     24908 --------T-----C-----T
i Perodicticus_potto.k141_1854441                        I 2 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       38025  6 +     38305 CA---C--T-----T-----T
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245310  6 +  18517816 CA---T--T-----T-----T
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30408  5 -     56120 -A---C--T-----T-----T
i Petromus_typicus.PetTyp_scaffold_17301                 I 20 I 20
s Piliocolobus_badius.k141_2704958                             615  6 +     55023 CA---C--G-----C-----T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                           28  6 -     89929 CA---C--G-----C-----T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             616  6 +     40849 CA---C--G-----C-----T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252364  6 +  14605196 CA---C--G-----C-----T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1334  6 +     22231 TA---C--T-----C-----T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 13
s Pithecia_albicans.k141_1239476                             63367  6 +    207309 CA---C--T-----C-----T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4461  6 -     25401 CA---C--T-----C-----T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30202  6 +     58159 CA---C--T-----C-----T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30478  6 +     63561 CA---C--T-----C-----T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30241  6 +     51148 CA---C--T-----C-----T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555208  6 -   4542175 CA---C--T-----C-----T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30225  6 +     51125 CA---C--T-----C-----T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6631  6 +     39866 CA---C--T-----C-----T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1716  6 -      9282 CA---C--T-----C-----T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41120  6 -     87950 CA---C--T-----C-----T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41513  6 -     88961 CA---C--T-----C-----T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6212  6 -     39403 CA---C--T-----C-----T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41164  6 +     87928 CA---C--T-----C-----T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6209  6 -     60166 CA---C--T-----C-----T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13145  6 -     67232 CA---C--T-----C-----T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41061  6 -     90634 CA---C--T-----C-----T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42529  6 +     89403 CA---C--T-----C-----T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176126  6 - 189387572 CA---C--T-----C-----T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190944  6 -   9816681 CA---C--T-----C-----T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25748  6 +     69807 CA---C--G-----C-----T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42943  6 -     80239 CA---C--G-----C-----T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981083  6 +   4620579 TG---T--T-----C-----T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564550  6 -   2598838 TG---T--T-----C-----T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2186  6 -      7103 TG---T--T-----C-----T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2783  6 -     11706 TG---T--T-----C-----T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6519  6 -     30655 TG---T--T-----C-----T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32844  6 +     46564 TG---T--T-----C-----T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93115  6 -     98465 TG---T--T-----C-----T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6752  6 +     35169 TG---T--T-----C-----T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34629  6 +     52041 CA---T--T-----T-----T
i Psammomys_obesus.NESX01036366.1                        I 1 C 0
s Pteronotus_parnellii.KE847780.1                            50169  6 -     66298 CA---C--T-----C-----T
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3175  6 -     18639 TA---C--T-----C-----T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839337  6 -  28871421 CA---C--T-----T-----T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535904  6 -   4952924 CA---C--T-----C-----T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097551  6 +  38429054 TA---C--T-----C-----C
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25123  6 +     91421 CA---C--G-----C-----T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151616  6 -   7812017 CA---C--G-----C-----T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5993  6 +     72585 CA---C--G-----C-----T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021081  6 -  90668790 ca---t--t-----t-----t
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913301  6 +   3329780 CA---C--T-----C-----T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26933  6 +     27361 CA---C--G-----C-----T
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120300  6 + 195417433 CA---C--G-----C-----T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234541  6 -   7961872 CA---C--G-----C-----T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73320  6 -    116970 CA---C--T-----C-----T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2509  6 +     27962 CA---C--T-----C-----T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2404  6 +      6077 CA---C--T-----C-----T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2496  6 +      5971 CA---C--T-----C-----T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2438  6 +      5932 CA---C--T-----C-----T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               761  6 -      4390 CA---C--T-----C-----T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390193  6 - 209938924 CA---C--T-----C-----T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2386  6 +      5979 CA---C--T-----C-----T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3127  6 -      4301 CA---C--T-----C-----T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236790  6 +   5703754 CA---C--T-----C-----T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6380  6 +     21866 CA---C--T-----C-----T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114491  6 +    313613 CA---T--T-----C-----T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23440  6 +     27374 CA---C--G-----C-----T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26959  6 +     58920 CA---C--G-----C-----T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13455  6 -     45317 CA---C--G-----C-----T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21113  6 -     42441 CA---C--G-----C-----T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23793  6 -     29113 CA---C--G-----C-----T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26862  6 -     48123 CA---C--G-----C-----T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_40772                    20638 11 -     32514 ca---t--ggtaaat-----t
i Sigmodon_hispidus.SigHis_scaffold_40772                n 36 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856821  6 -   1910179 TT---C--T-----C-----T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866798  6 +   3870691 CC---C--T-----G-----T
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4955  8 -     97271 TG---CCCT-----C-----T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123390  6 +    196729 TA---C--T-----C-----T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389379  6 +   1523678 CA---C--T-----C-----T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12142  6 +     22964 TA---C--T-----C-----T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1163  6 +      5583 CA---C--T-----C-----C
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190076  6 +    199430 CA---C--T-----C-----T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104027  6 -    539355 CA---C--T-----C-----T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5379  6 +      6850 CA---C--T-----C-----T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5427  6 +     20590 CA---C--T-----C-----T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351315  6 - 186847797 CA---C--T-----C-----T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22735  5 -     33621 -G---C--T-----T-----T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 20 I 20
s Tolypeutes_matacus.TolMat_scaffold_31955                   18298 11 -     31044 TA---T--T-----CTATCTA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478188  6 -    610378 TA---C--T-----C-----T
i Tonatia_saurophila.TonSau_scaffold_294                 I 2 C 0
s Trachypithecus_auratus.k141_1189070                        19004  6 +     26378 CA---C--G-----C-----T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31668  6 -     78344 CA---C--G-----C-----T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18325  6 +     25722 CA---T--G-----C-----T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26619  6 -     62838 CA---C--G-----C-----T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26667  6 +     46913 CA---C--G-----C-----T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7473  6 -     28527 CA---C--G-----C-----T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28558  6 -     64340 CA---C--G-----C-----T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26595  6 -     63452 CA---C--G-----C-----T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8038  6 +     22490 CA---C--G-----C-----T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1397  6 -      6147 CA---C--G-----C-----T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8371  6 -     13050 CA---C--G-----C-----T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253610  6 -   6242583 CA---C--G-----C-----T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59361  6 +     59866 CA---C--G-----C-----T
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     694  6 -     21056 TA---T--T-----C-----T
i Uropsilus_gracilis.UroGra_scaffold_46687               I 1 I 2
s Ursus_maritimus.KK499267.1                                180324  6 +   5085361 TA---C--T-----C-----T
i Ursus_maritimus.KK499267.1                             I 18 C 0
s Varecia_rubra.k141_787544                                  23728  6 -     30710 TG---T--T-----C-----T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22635  6 -    147434 TG---T--T-----C-----T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103474  6 -    112863 TA---T--G-----C-----T
i Vulpes_lagopus.VulLag_flattened_line_12041             I 1 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172576  6 -    224448 CC---C--T-----G-----T
i Xerus_inauris.XerIna_scaffold_2302                     I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27362  6 -     86975 TA---C--T-----C-----T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1825  6 +      2695 CA---C--G-----T-----A
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 1 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508  0 -   4065304 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Procavia_capensis.ProCapCap_scaffold_121686                 8472 171 +     14086 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Mus_pahari.LT608297.1                                   58215786  8 +  89631738 I
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_99956                11302 171 +     12639 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3649 27 +     36723 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-GT-----------------TG---GA--CG
s Acinonyx_jubatus.LLWD01001279.1                           811297 27 +   1699592 CA---------------GAT-GAT-A------GATg-g---g-a--a----a-a-at-----------------caaaag-----
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18523 27 +     63021 TG---------------AAT-TAT-A------GCTT-G---T-A--A----A-A-AT-----------------AT---GA--AA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413824 27 +  29979442 TA---------------AAT-AGT-A------CCTG-G---G-A--A----A-A-AT-----------------AAGAAG-----
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213934 27 +    347723 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16449 27 -     61208 TG---------------AAT-AAC-A------ACTG-G---G-A--A----A-A-AT-----------------AC---CA--AG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   45975 27 +     53615 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41919 27 +     44087 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14557 27 -     21945 CG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16229 27 +     32033 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70682 27 -     84148 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42915 27 -     78289 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42361 27 +     55831 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40802 27 -     64179 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22449 27 -     24835 TG---------------AAT-AAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39432 27 +     45454 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45130 27 +     70886 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7255 27 +     30854 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31394 27 +     42133 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175156 23 -    412891 TG---------------AAT-GAT-A------CTTA-G---G-A--A----A-A-AT-----------------CA---------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49197 26 -     65372 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--A-
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42951 26 +     43593 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--A-
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670964 26 +   5030052 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--A-
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22606 26 -     23494 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--A-
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7742 26 +      8415 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--A-
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14484 27 -     32367 TG---------------GAT-AAT-G------GTTG-G---G-A--A----A-A-AT-----------------CT---GA--AA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3446 23 -     15198 CA---------------AAT-GAC-A------CTTG-G---G-A--A----A-A-AT-----------------CA---------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273194 27 +  21539123 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---CA--AG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9360 27 +     48076 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---CA--AG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4497 27 -     28759 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---CA--AG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32051 27 +     44353 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---CA--AG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47421 27 -     71267 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---CA--AG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21481 27 -     33135 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---CA--AG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4672 27 +     11645 TG---------------ACT-GAT-A------GCTG-G---G-A--A----A-G-AT-----------------CA---GA--AG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4678 27 -     19611 TG---------------ACT-GAT-A------GCCG-G---G-A--A----A-G-AT-----------------CA---GA--AG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6386 27 +     28062 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41680 27 -     91139 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19206 27 +     95584 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19119 27 +    119600 TG---------------AAT-GAC-A------GCTG-A---G-A--C----A-C-AT-----------------TG---AA--AG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8665 27 +     18648 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8203 27 -     13885 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             271 27 -      8861 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-T-AT-----------------TG---AA--AG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452664 27 + 189096842 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-T-AT-----------------TG---AA--AG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                187 27 +      8664 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-T-AT-----------------TG---AA--AG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42503850 27 +  60362399 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------TAGAAG-----
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7486 27 -     23171 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------TAGAAG-----
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220829 27 +   9314153 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------TAGAAG-----
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613964 27 +  59632846 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------TAGAAG-----
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105545 27 -  63665305 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------TAGAAG-----
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268753 24 +    496798 TT---------------AAT-GAT-A------G----A---G-A--C----A-A-AT-----------------CA---GC--AG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3738 23 +      5315 CA---------------AAT-GAT-A------CTTG-G---G-A--A----A-A-GT-----------------CA---------
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20170 12 -     39886 -------------------------------------------A--A----A-A-AG-----------------AT---GA--GG
i Castor_canadensis.CasCan_scaffold_39952                I 9 C 0
s Cavia_aperea.AVPZ01000300.1                              4994419 23 +  23392119 --------------------------------------------------------TGATATCTGAGGAAAA-TTT---AA--AC
i Cavia_aperea.AVPZ01000300.1                            I 4 C 0
s Cavia_porcellus.DS562891.1                               4997861 23 +  23407841 --------------------------------------------------------TGATATCTGAGGAAAA-TTT---AA--AG
i Cavia_porcellus.DS562891.1                             I 4 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60962 23 -     66877 --------------------------------------------------------TGATATCTGAGGAAAA-TTT---AA--AG
i Cavia_tschudii.CavTsc_scaffold_23560                   I 4 C 0
s Cebuella_niveiventris.k141_592277                           3584 27 -     12580 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41639 27 +     53515 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369577 26 -  26074798 TG---------------GAT-GAT-A------GCTG-G---G-G--C----A-C-AC-----------------TG----A--AA
i Cebus_albifrons.Contig27                               C 0 I 1
s Cebus_olivaceus.k141_1404781                                6466 26 -     34880 TG---------------GAT-GAT-A------GCTG-G---G-G--C----A-C-AC-----------------TG----A--AA
i Cebus_olivaceus.k141_1404781                           C 0 I 1
s Cebus_unicolor.k141_1654760                                65561 26 -     89041 TG---------------GAT-GAT-A------GCTG-G---G-G--C----A-C-AC-----------------TG----A--AA
i Cebus_unicolor.k141_1654760                            C 0 I 1
s Cephalopachus_bancanus.k141_1689090                          677 24 -      5494 TT---------------AAT-GAT-A------G----A---G-A--C----A-A-AT-----------------CA---GC--AG
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490629 27 -  27778364 TG---------------AGT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17462 27 +     27315 TG---------------AGT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139154 27 -   4669795 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42894 27 +     47900 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42727 27 -     44860 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42710 27 -    148725 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--TG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9967 27 -     17524 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25689 27 -     34525 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30165 27 -     45857 TG---------------AAT-GAC-A------GTTG-G---G-A--C----A-C-AT-----------------TG---GG--CG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23658 27 +     70610 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20583 27 +     36323 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11276 17 -     19938 TG---------------AAT-GAT-A------GCTG-G---G-A--A--------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 9
s Cheirogaleus_major.k141_666340                             29107 27 -     33796 TG---------------ACT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3623 27 -     15404 TG---------------ACT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7468 26 -     32913 TG---------------A-T-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17881 26 -     40346 TG---------------A-T-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18136 26 +    216457 TG---------------A-T-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17929 26 +     39636 TG---------------A-T-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2517 27 +      5346 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41015 27 -    112038 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6587 27 +     34062 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341480 27 +  18827391 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8025 27 -     44032 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302805 27 - 135778131 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10329 27 +     15858 TG---------------AAT-GAT-A------GCTG-G---G-A--A----T-A-AT-----------------TA---GA--AG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601905 27 -    839153 TG---------------AAT-GAT-A------GCTG-G---G-A--A----T-A-AT-----------------TA---GA--AG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407246 27 -   2368649 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377124 27 - 200372422 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                671 27 -     84244 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805706 24 +  53390261 TA---------------AGT-GAT-A------ACTG-G---G-A--A----A-A-AT-----------------CA---G-----
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1218 24 -      8242 CA---------------AAC-AAT-A------GTTG-G---G-A--A----A-A-AT-----------------CA---G-----
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40728 13 -     83289 TG---------------ACT-TAC-A------GCTT-------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 9
s Cricetulus_griseus.LT883664.1                          213113191 27 - 224834208 CG---------------AAC-TAC-A------GCTT-G---A-A--A----A-A-AT-----------------AT---GA--AG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2750 27 +     87169 CA---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643223 27 -   1526836 TG---------------AAT-GAC-A------GCAG-A---G-G--A----A-A-AC-----------------AT---GA--AG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3454  9 +     50838 --------------------------------------------------------T-----------------GA---AATCTG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 4 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2309 23 +     36344 --------------------------------------------------------TAACATCAAAGAAAAA-TTT---AA--AG
i Cuniculus_paca.CunPac_flattened_line_7025              I 4 C 0
s Dasypus_novemcinctus.JH564415.1                          2108617 27 -   2246927 TG---------------AAT-AGT-A------GCTG-G---G-A--A----A-A-AC-----------------TA---GA--AG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291043 27 +  12879189 CG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AC-----------------CA---GA--AG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863188 23 -  20541912 CG---------------CAT-GAT-A------CTTG-G---G-A--A----G-A-GT-----------------CA---------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662921 27 -   1390856 TG---------------AGT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137706 27 -    198055 TG---------------AGT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96945  7 -    115145 --------------------------------------------------------T-----------------AT---AA--AG
i Dinomys_branickii.DinBra_scaffold_10381                I 20 C 0
s Dipodomys_ordii.KN672350.1                              18948788 27 -  37912305 TG---------------AAT-GGC-A------ATTG-G---G-A--A----A-C-AT-----------------CT---AA--AG
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3735 27 -     10735 TG---------------AAT-GGC-A------ATTG-G---G-A--G----A-C-AT-----------------CT---GA--AG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8373 23 +     14636 --------------------------------------------------------TGATATCTGAG-AAAACTTT---CA--AG
i Dolichotis_patagonum.DolPat_scaffold_80628             I 4 C 0
s Echinops_telfairi.JH980293.1                            62852379 22 - 111700974 ---------------------GAT-A------ATTG-G---G-A--A----A-C-AT-----------------CA---GA--CG
i Echinops_telfairi.JH980293.1                           I 5 C 0
s Eidolon_helvum.AWHC01266696.1                               4751 24 +     19438 CA---------------AAT-GAT-A------GTTG-G---G-A--A----A-A-AT-----------------CA---G-----
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105920 28 -  10337057 ---------------------AAA-CCCCCATTTTG-G---T-A--A----A-A-CT-----------------CA---ga--gg
i Elephantulus_edwardii.JH947257.1                       I 5 N 0
s Ellobius_lutescens.LOEQ01008920.1                          29453 27 +    110024 TA---------------AAC-TAT-A------Gctt-g---a-a--a----a-a-ta-----------------tt---aa--ag
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11427 27 +     18970 TA---------------AAC-TAT-A------Gctt-g---a-a--a----a-a-ta-----------------tt---aa--ag
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914580 27 +  41312741 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576817 13 +  14770903 CA---------------AAT-GAT-A------GTTG-------------------------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 13
s Equus_asinus.JREZ01000139.1                              3039913 27 -   4378816 TG---------------AAT-GAT-G------GCTG-G---G-A--A----A-A-AT-----------------CGAAAG-----
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373847 27 +  39960074 TG---------------AAT-GAT-G------GCTG-G---G-A--A----A-A-AT-----------------CGAAAG-----
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410633 27 -    498745 TG---------------AAT-GAT-G------GCTG-G---G-A--A----A-A-AT-----------------CGAAAG-----
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               261003 27 +  21539334 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13215 27 -     24895 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40924 27 -     70999 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84886 27 +    112731 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41459 27 +     68309 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51781 27 -     65740 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22414 27 -     75513 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46607 27 -     97555 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3334 27 +     30972 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41054 27 -     52037 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57458 27 -    111500 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245209 27 - 206538554 CA---------------GAT-TAT-A------GATg-g---g-a--a----a-a-at-----------------caaaag-----
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185114995 27 - 205367284 CA---------------GAT-GAT-A------GATg-g---g-a--a----a-a-at-----------------caaaag-----
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26097 27 -     30238 CA---------------GAT-GAT-A------GATG-G---G-A--A----A-A-AT-----------------CAAAAG-----
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     122998 27 -    137831 TG---------------AAT-GAT-G------GGTA-G---G-T--A----G-A-AT-----------------TA---GG--AG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6543 27 +     22493 TG---------------AAT-GAT-A------GGTA-G---G-T--A----G-A-AT-----------------CA---GG--AG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18595 27 -     32986 TG---------------AAT-GAT-G------GCTG-G---G-T--A----G-A-AT-----------------CA---GG--AG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17527 27 +     18121 TG---------------AAT-GAC-A------GCTG-G---G-A--A----A-A-AT-----------------TA---GA--AG
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32653 26 -     36801 TG---------------AAT-GAT-A-------TTG-A---G-A--A----A-A-AT-----------------CT---GA--GA
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               3988 27 -      8343 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-G-GT-----------------TG---GA--CG
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                252999 27 - 186649187 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-GT-----------------TG---GA--CG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     148 27 -     78134 tg---------------aAT-GAT-A------GTTA-A---G-A--A----A-A-AT-----------------TT---GA--GA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13142 27 -     40692 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34543 27 +     49394 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59412 27 -     66874 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8285 27 -     42923 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15285 27 -     53142 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29236 27 -    327341 CA---------------AAT-GAT-A------GCTG-G---C-A--A----A-A-AT-----------------TGGAAG-----
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925512  7 -  22651954 --------------------------------------------------------T-----------------AT---AA--AG
i Heterocephalus_glaber.JH602082.1                       I 4 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11473 26 +     12639 ac----------------AT-GAT-A------GCTG-G---G-A--G----A-A-AT-----------------CA---GA--AA
i Heterohyrax_brucei.HetBruBak_scaffold_99956            I 171 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49294 24 +     49977 CA---------------AAT-GAC-A------TTTG-G---G-A--A----A-A-AT-----------------CA---G-----
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 4
s Hoolock_leuconedys.ctg274                                    140988 27 -    630532 TG---------------AAT-GAT-A------ACTG-G---G-A--C----A-C-GT-----------------TG---GA--TG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67929 27 +     83186 CA---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69808 23 +    143317 --------------------------------------------------------TGATATCTGAGAAAAA-TTT---AA--AG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 4 C 0
s Hylobates_agilis.k141_1155965                               4022 27 +     12352 TG---------------AAT-GAT-A------ACTG-G---G-A--C----A-C-AT-----------------TG---GA--TG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11205 27 +     55766 TG---------------AAT-GAT-A------ACTG-G---G-A--C----A-C-AT-----------------TG---GA--TG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050801 27 + 191637585 TG---------------AAT-GAT-A------ACTG-G---G-A--C----A-C-AT-----------------TG---GA--TG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799679 27 +  11177569 TG---------------AAT-GAT-A------ACTG-G---G-A--C----A-C-AT-----------------TG---GA--TG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385222 27 +   7955117 AG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CT---GA--AA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     795 27 +     11955 TG---------------ACT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237637 27 +   9596543 TG---------------AGT-GAC-A------ACTG-G---G-A--A----A-A-AT-----------------AC---CA--AG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41736 27 +    110728 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60293 14 -     65777 CA---------------AAT-GAG-A------GTTG-A-----------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 9
s Lemur_catta.scaffold_24                                 14757933 28 +  30322482 TG---------------AATAGAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2653 27 -     13097 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2408 27 +      5940 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2238 27 -      5717 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8602 27 -     11567 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                          9983 27 -     12945 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7464 27 +     29618 TG---------------ACT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7461 27 +     31569 TG---------------ACT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CT---GA--AG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7472 27 +     24756 TG---------------ACT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7470 27 +     16388 TG---------------ACT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811971 27 -   3914936 CA---------------AAT-GGT-A------ACTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16313 23 +     24238 TG---------------AAT-A---A------GCTG-G---T-A--A----A-G--T-----------------CA----A--AA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331107 27 -   1826925 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8756 27 +     19643 TG---------------AAT-GAT-T------GCTG-G---G-A--A----G-A-AT-----------------CA---GG--TG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042417 27 -   6120653 TG---------------AAT-GAT-T------GCTG-G---G-A--A----G-A-AT-----------------CA---GG--TG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078878 42 +  43346337 accaggggtccctcTTAAAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Loxodonta_africana.GL010049.1                          I 159 C 0
s Lycaon_pictus.CM007581.1                                41613119 27 +  59628241 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------TAGAAG-----
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43424 27 -     61512 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--TG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371085 27 -  60120075 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--TG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23340 27 +     30207 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20443 27 -     24934 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23292 27 +     30527 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34481 27 -     50087 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44252 27 +     51645 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413421 27 - 187317192 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397644 27 +  25927173 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46808 27 -     62418 TG---------------AAT-GAC-A------GCTA-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23463 27 +     24253 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--TG
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43283 27 +     59329 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269211 27 +    668171 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20398 27 +     21031 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--TG
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                  995 27 +     17132 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221714 24 -    270270 CA---------------AAT-GAT-A------GTTG-G---A-A--A----A-A-AT-----------------CA---G-----
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320495 27 +  24302211 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355327 27 -    752769 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             671994 30 -    737560 CG---------------AAT-gat-a------gctg-g---a-a--a-aaaa-a-at-----------------caaaag-----
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219282 29 +    317179 CA---------------AAT-GAt-a------gctg-g---g-a--a-aa-a-a-at-----------------aaaaag-----
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499446 27 +  40650429 AG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CT---GA--AA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148904 24 +    207569 TG---------------AAT-GAT-A------GTTG-G---G-G--A----A-A-AT-----------------CA---G-----
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24464 27 -     74585 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47097 25 -    140813 TG---------------AAT-TAC-A------GCTT-G---A-A--A----A-A-AT-----------------A-----A--AG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427742 27 +  29670104 TG---------------AAC-TAT-G------CCTT-G---A-A--A----A-A-AT-----------------AT---GA--AG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8772 27 +     17804 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9277 27 -     12984 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17591 27 -     26561 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983073 29 +  93316391 TG---------------ACT-GAT-A---TA-GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43471 20 +    145209 -----------------------T-A------ATTG-G---G-A--A----A-C-AT-----------------CA---GA--AG
i Microgale_talazaci.MicTal_scaffold_6613                I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183131 17 +    200668 CG---------------GAT-GAT-A------CTTG-G---G-A--A--------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 5
s Microtus_ochrogaster.CM001695.1                         15960864 27 +  27267610 GA---------------AAC-TAT-A------GCTT-G---A-A--A----A-A-TA-----------------TT---AA--GG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361234 24 -   8254450 CG---------------AAT-GAT-A------GTGG-G---G-A--A----A-A-AT-----------------CA---G-----
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40135 24 -     48117 CG---------------AAT-GAT-A------GTGG-G---G-A--A----A-A-AT-----------------CA---G-----
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20521 27 -     27822 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         6982 27 +     27589 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50865 27 -     62432 TG---------------ACT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177288 23 +    366855 CA---------------AAC-GAT-G------CTTG-C---T-A--A----A-A-AT-----------------CA---------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   16989 27 -     63510 CA---------------AAT-GAT-A------GCTG-G---A-A--A----A-A-AT-----------------CAGAAG-----
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37166 24 +     47283 CA---------------AAA-GAT-A------GTTG-A---A-A--A----A-A-AT-----------------CG---G-----
i Murina_feae.MurFea_scaffold_17764                      C 0 I 2
s Mus_caroli.FMAL02030609.1                                   5173 27 +      5579 TA---------------AGT-TAT-A------GCTT-G---A-A--A----A-A-CT-----------------AT---GA--AG
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685876 27 + 129401213 TA---------------AGT-TAT-A------GCTT-G---A-A--A----A-A-CT-----------------AT---GA--AG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58215794  2 +  89631738 -----------------------------------------------------------------------------------aa
i Mus_pahari.LT608297.1                                  I 8 C 0
s Mus_spretus.CM004101.1                                  39495194 27 + 130317789 TA---------------AGT-TAT-A------GCTT-G---G-A--A----A-A-CT-----------------AT---GA--AG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81268 19 -     86153 TG---------------AAT-GAC-A------GCTG-A---G-A--C----A-A-------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 6
s Mustela_putorius.JH418006.1                             14353616 27 +  14710649 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791211 27 +  10118263 CA---------------AAT-GAT-a------gttggg---a-aaaa----a-a-at-----------------ca---g-----
i Myotis_brandtii.KE162005.1                             C 0 I 2
s Myotis_davidii.KB100139.1                                4385573 25 +   6019432 CA---------------AAT-GAT-A------GTCGGG---A-A--A----A-A-AT-----------------CA---G-----
i Myotis_davidii.KB100139.1                              C 0 I 2
s Myotis_lucifugus.GL429869.1                               381393 27 +   4330536 CA---------------AAT-GAT-a------gttggg---a-aaaa----a-a-at-----------------ca---g-----
i Myotis_lucifugus.GL429869.1                            C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_66571                          222 25 +     18357 CA---------------AAT-GAT-A------GTTGGA---A-A--A----A-A-AT-----------------CA---G-----
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118048 27 +    130748 TG---------------AAT-GAT-A------GCTG-G---G-C--A----A-A-AT-----------------TA---GA--AG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              27105 27 +     34575 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467574 27 -  31847680 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126096 23 -    149072 CG---------------AAT-GAC-A------GTTG-A---G-A--A----A-A-AT-----------------CA---------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51911 27 -    132029 TG---------------AAT-GAT-A------ACTG-G---G-A--C----A-A-GT-----------------TG---GA--TG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8006 27 -     16345 TG---------------AAT-GAT-A------ACTG-G---G-A--C----A-A-GT-----------------TG---GA--TG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13891 27 +     22201 TG---------------AAT-GAT-A------ACTG-G---G-A--C----A-A-GT-----------------TG---GA--TG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412112 27 -  22158432 TG---------------AAT-GAT-A------ACTG-G---G-A--C----A-A-GT-----------------TG---GA--TG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24289 27 -     54323 TG---------------AAT-GAT-A------ACTG-G---G-A--C----A-A-GT-----------------TG---GA--TG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196720 27 +   9404916 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------TAGAAG-----
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634768 27 + 196305487 TG---------------AAT-GAT-T------GCTG-G---G-A--A----G-A-AT-----------------CA---GG--AG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1526 27 -      3937 TG---------------AAT-GAT-T------GCTG-G---G-A--A----G-A-AT-----------------CA---GG--AG
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563007 27 - 199412804 TG---------------AAT-GAT-T------GCTG-G---G-A--A----G-A-AT-----------------CA---GG--AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549691 25 -   3988456 TG---------------AAT-AAT-A------GCTG-A---C-A--A----A-G--T-----------------GA----G--AA
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Octodon_degus.JH651603.1                                11045960  9 -  11899542 --------------------------------------------------------T-----------------Ga---agtctg
i Octodon_degus.JH651603.1                               I 4 I 14
s Odobenus_rosmarus.KB229312.1                             1450170 27 +   2017862 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91224 27 -    140218 TA---------------AAC-TAT-A------GCCT-G---A-A--A----T-T-TA-----------------TT---AA--GG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1598 26 -     41509 TT---------------CAT-TAC-A------GCTT-G---A-A--A----A-A-A------------------AT---GA--AG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11868 24 -     14239 ------------------AT-GAT-G------GCTG-G---A-A--A----A-A-AT-----------------CA---GA--AG
i Orycteropus_afer.OryAfe_flattened_line_171931          I 33 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102147 23 - 174332312 TG---------------AAT-A---A------GCTG-G---T-G--A----A-G--T-----------------CA----A--AA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37758 27 +    559221 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------TAGAAG-----
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38151 27 -     51505 TG---------------AAT-GAT-G------GCTG-G---G-T--A----G-A-AT-----------------CA---GG--AG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351154 27 +   1103335 TG---------------AAT-GAT-G------GCTG-G---G-T--A----G-A-AT-----------------CA---GG--AG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.KZ622849.1                                 31687 27 -    110857 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-TT-----------------TG---GA--CG
i Pan_troglodytes.KZ622849.1                             I 325 I 5
s Panthera_onca.PanOnc_flattened_line_3271                   22918 27 -    230217 CA---------------AAT-GAT-A------GATG-G---G-A--A----A-A-AT-----------------CAAAAG-----
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460244 27 -  18783137 CA---------------AAT-GAT-A------GATg-g---g-a--a----a-a-at-----------------caaaag-----
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970964 27 +   8748460 CA---------------AAT-GAT-A------GATg-g---g-a--a----a-a-at-----------------caaaag-----
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241335 27 - 183742232 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7799 27 +     21308 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288838 27 -  20919399 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20454 27 -     27687 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13590 27 +     16796 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20400 27 -     23640 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13556 28 +     78924 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-AGAT-----------------CAGAAG-----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24436 27 +     31479 TG---------------AAT-CAT-G------GCTG-G---G-G--A----G-A-AT-----------------CA---GG--AG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16795 27 -     24908 TG---------------AAT-CAT-G------GCTG-G---G-A--A----G-A-AT-----------------CA---GG--AG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       38031 27 +     38305 TG---------------AAT-GGT-A------GTTG-G---G-A--A----A-C-AT-----------------CT---GA--AG
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245316 27 +  18517816 TG---------------AAT-TGC-A------GCTT-G---A-A--A----A-A-AA-----------------CT---GA--AG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30433  7 -     56120 --------------------------------------------------------T-----------------AT---AA--AG
i Petromus_typicus.PetTyp_scaffold_17301                 I 20 C 0
s Piliocolobus_badius.k141_2704958                             621 26 +     55023 TG---------------AGT-GAT-A------GCTG-G---G-G--C----A-C-AC-----------------TG---GA--C-
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                           34 27 -     89929 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             622 27 +     40849 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252370 27 +  14605196 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1353 13 +     22231 -----------------------------------------AAAAAA----A-A-AT-----------------CA---G-----
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 13 I 2
s Pithecia_albicans.k141_1239476                             63373 27 +    207309 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4467 27 -     25401 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30208 27 +     58159 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30484 27 +     63561 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30247 27 +     51148 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555214 27 -   4542175 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30231 27 +     51125 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6637 26 +     39866 TG---------------A-T-GAT-A------GCTG-G---C-A--C----A-C-AC-----------------TG---AA--AG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1722 26 -      9282 TG---------------A-T-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---AA--AG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41126 26 -     87950 TG---------------A-T-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---AA--AG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41519 26 -     88961 TG---------------A-T-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---AA--AG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6218 26 -     39403 TG---------------A-T-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---AA--AG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41170 26 +     87928 TG---------------A-T-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---AA--AG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6215 26 -     60166 TG---------------A-T-GAT-A------GCTG-G---C-A--C----A-C-AC-----------------TG---AA--AG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13151 26 -     67232 TG---------------A-T-GAT-A------GCTG-G---C-A--C----A-C-AC-----------------TG---AA--AG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41067 26 -     90634 TG---------------A-T-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---AA--AG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42535 26 +     89403 TG---------------A-T-GAT-A------GCTG-G---C-A--C----A-C-AC-----------------TG---AA--AG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176132 27 - 189387572 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-GT-----------------TG---GA--CG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190950 27 -   9816681 TG---------------AAT-GAT-A------GCTG-G---G-A--C----A-C-GT-----------------TG---GA--CG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25754 27 +     69807 TG---------------GGT-GAT-A------GCTG-G---G-A--C----A-C-GC-----------------TG---CA--CG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42949 27 -     80239 TG---------------GGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---CA--CG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8643 26 +     14086 ac----------------AT-GAT-A------GCTG-G---G-A--G----A-A-AT-----------------CA---GA--AA
i Procavia_capensis.ProCapCap_scaffold_121686            I 171 C 0
s Prolemur_simus.MPIZ01000396.1                            1981089 27 +   4620579 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564556 27 -   2598838 TG---------------ACT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2192 27 -      7103 TG---------------ACT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2789 27 -     11706 TG---------------ACT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6525 27 -     30655 TC---------------ACT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32850 27 +     46564 TC---------------ACT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93121 27 -     98465 TG---------------ACT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6758 27 +     35169 TG---------------ACT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34635 28 +     52041 TG---------------AAT-TAC-a------gctt-g---a-a--a----aga-aa-----------------at---ga--ag
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50175 23 -     66298 CC---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CG---------
i Pteronotus_parnellii.KE847780.1                        C 0 I 5
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3181 27 -     18639 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839343 24 -  28871421 CA---------------AAT-GAT-A------GTTG-G---G-A--A----A-A-AT-----------------CA---G-----
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535910 24 -   4952924 CA---------------AAT-GAT-A------GTTG-G---G-A--A----A-A-AT-----------------CA---G-----
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097557 27 +  38429054 CA---------------GAT-GAT-A------GATg-g---g-a--a----a-a-at-----------------caaaag-----
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25129 27 +     91421 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151622 27 -   7812017 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              5999 27 +     72585 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021087 27 -  90668790 aa---------------aat-tac-a------gCTT-G---A-A--A----A-A-CT-----------------AT---GA--AG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913307 24 +   3329780 CA---------------AAT-GGT-A------GTTG-G---G-A--A----A-A-AT-----------------CA---G-----
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26939 27 +     27361 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120306 27 + 195417433 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234547 27 -   7961872 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73326 24 -    116970 CA---------------AAT-GAT-A------GTTG-G---G-A--A----A-A-AT-----------------CA---G-----
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2515 27 +     27962 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2410 27 +      6077 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2502 27 +      5971 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2444 27 +      5932 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               767 27 -      4390 TG---------------AGT-GAT-A------GCTG-G---G-A--A----A-C-AT-----------------TG---AA--AG
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390199 27 - 209938924 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2392 27 +      5979 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---AA--AG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3133 27 -      4301 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AT-----------------TG---AA--AG
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236796 26 +   5703754 TG---------------GAT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG----A--AA
i Sapajus_apella.ctg103                                  C 0 I 1
s Sapajus_macrocephalus.k141_796559                           6386 26 +     21866 TG---------------GAT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG----A--AA
i Sapajus_macrocephalus.k141_796559                      C 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114497 24 +    313613 TG---------------AAT-GTT-A------ACTA-A---A-A--A----G-A-AT-----------------CA---G-----
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23446 27 +     27374 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26965 27 +     58920 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13461 27 -     45317 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21119 27 -     42441 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23799 27 -     29113 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26868 27 -     48123 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_40772                    20649 31 -     32514 aa---------------aat-taa-a------aaat-g---a-a--ataaaa-a-at-----------------at---ga--ag
i Sigmodon_hispidus.SigHis_scaffold_40772                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856827 29 -   1910179 CG---------------AAC-GAT-G------AGTG-GGGAA-A--A----A-A-AT-----------------CA---GA--A-
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866804 27 +   3870691 AG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CT---GA--AA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4963 27 -     97271 GA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123396 27 +    196729 CA---------------AAC-GAT-A------GCTG-G---A-A--A----A-A-AT-----------------CAGAAG-----
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389385 27 +   1523678 TG---------------AAT-GAT-A------GATG-G---G-A--C----A-C-AT-----------------TG---GA--TG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12148 24 +     22964 TG---------------AAT-GAT-A------GTGG-G---G-A--T----G-A-AT-----------------CA---G-----
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_224794                1169 27 +      5583 TG---------------AAT-GAT-A------GCTG-G---G-C--A----A-A-AT-----------------TA---GA--AA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190082 27 +    199430 TG---------------AAT-GAT-A------GCGG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104033 27 -    539355 TG---------------AAT-GAT-A------GCGG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5385 24 +      6850 TT---------------AAT-GAT-A------G----A---G-A--C----A-A-AT-----------------CA---GC--AG
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5433 24 +     20590 TT---------------AAT-GAT-A------G----A---G-A--C----A-A-AT-----------------CA---GC--AG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351321 27 - 186847797 TG---------------AAT-GAC-A------GCTG-G---G-A--C----A-C-AT-----------------TG---GA--CG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22760  7 -     33621 --------------------------------------------------------T-----------------AT---AA--AG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 20 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18309 27 -     31044 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478194 23 -    610378 TC---------------AAT-GAT-A------CTTG-G---G-A--A----A-A-AT-----------------CA---------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19010 27 +     26378 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31674 27 -     78344 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18331 27 +     25722 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26625 27 -     62838 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26673 27 +     46913 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7479 27 -     28527 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28564 27 -     64340 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26601 27 -     63452 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8044 27 +     22490 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1403 27 -      6147 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Trachypithecus_melamera.k141_591572                    C 0 I 69
s Trachypithecus_obscurus.k141_848057                         8377 27 -     13050 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253616 27 -   6242583 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59367 27 +     59866 TG---------------AGT-GAT-A------GCTG-G---G-A--C----A-C-AC-----------------TG---GA--CG
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     702 19 -     21056 ---------------------GAT-A------AATG-G---A-A--A----A-A-AT-----------------CA---G-----
i Uropsilus_gracilis.UroGra_scaffold_46687               I 2 C 0
s Ursus_maritimus.KK499267.1                                180330 27 +   5085361 CA---------------AAT-AGT-A------CCTG-G---G-A--A----A-A-AT-----------------AAGAAG-----
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23734 27 -     30710 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22641 27 -    147434 TG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CA---GA--AG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103480 27 -    112863 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------TAGAAG-----
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172582 27 -    224448 AG---------------AAT-GAT-A------GCTG-G---G-A--A----A-A-AT-----------------CT---GA--AA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27368 27 -     86975 CA---------------AAT-GGT-A------CCTG-G---G-A--A----A-A-AT-----------------CAGAAG-----
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1831 27 +      2695 TG---------------AAT-GAC-A------GCTG-T---G-A--A----A-A-AC-----------------AT---CA--AG
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508  0 -   4065304 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3676 2 +     36723 AT
s Acinonyx_jubatus.LLWD01001279.1                           811324 1 +   1699592 g-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18550 2 +     63021 GT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413851 1 +  29979442 G-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213961 1 +    347723 G-
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16476 2 -     61208 GT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46002 2 +     53615 GT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41946 2 +     44087 GT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14584 2 -     21945 GT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16256 2 +     32033 GT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70709 2 -     84148 GT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42942 2 -     78289 GT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42388 2 +     55831 GT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40829 2 -     64179 GT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22476 2 -     24835 GT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39459 2 +     45454 GT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45157 2 +     70886 GT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7282 2 +     30854 GT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31421 2 +     42133 GT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175179 2 -    412891 GA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49223 2 -     65372 GT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42977 2 +     43593 GT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670990 2 +   5030052 GT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22632 2 -     23494 GT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7768 2 +      8415 GG
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14511 2 -     32367 AT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3469 2 -     15198 GA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273221 2 +  21539123 GT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9387 2 +     48076 GT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4524 2 -     28759 GT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32078 2 +     44353 GT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47448 2 -     71267 GT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21508 2 -     33135 GT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4699 2 +     11645 GT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4705 2 -     19611 GT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6413 2 +     28062 AT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41707 2 -     91139 AT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19233 2 +     95584 AT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19146 2 +    119600 AT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8692 2 +     18648 GT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8230 2 -     13885 GT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             298 2 -      8861 GT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452691 2 + 189096842 GT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                214 2 +      8664 GT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42503877 1 +  60362399 G-
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7513 1 -     23171 G-
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220856 1 +   9314153 G-
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613991 1 +  59632846 G-
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105572 1 -  63665305 G-
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268777 2 +    496798 AT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3761 2 +      5315 GA
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20182 2 -     39886 AA
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994442 2 +  23392119 GT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997884 2 +  23407841 GT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60985 2 -     66877 GT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3611 2 -     12580 GT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41666 2 +     53515 GT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369604 2 -  26074798 GT
i Cebus_albifrons.Contig27                               I 1 C 0
s Cebus_olivaceus.k141_1404781                                6493 2 -     34880 GT
i Cebus_olivaceus.k141_1404781                           I 1 C 0
s Cebus_unicolor.k141_1654760                                65588 2 -     89041 GT
i Cebus_unicolor.k141_1654760                            I 1 C 0
s Cephalopachus_bancanus.k141_1689090                          701 2 -      5494 AT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490656 2 -  27778364 GC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17489 2 +     27315 GC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139181 2 -   4669795 GT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42921 2 +     47900 GT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42754 2 -     44860 GT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42737 2 -    148725 GT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9994 2 -     17524 GT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25716 2 -     34525 GT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30192 2 -     45857 GT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23685 2 +     70610 GT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20610 2 +     36323 GT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11302 1 -     19938 C-
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 9 C 0
s Cheirogaleus_major.k141_666340                             29134 2 -     33796 GT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3650 2 -     15404 GT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7494 2 -     32913 CT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17907 2 -     40346 CT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18162 2 +    216457 CT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17955 2 +     39636 CT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2544 2 +      5346 GT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41042 2 -    112038 AC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6614 2 +     34062 AC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341507 2 +  18827391 GT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8052 2 -     44032 GT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302832 2 - 135778131 GT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10356 2 +     15858 GT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601932 2 -    839153 GT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407273 2 -   2368649 GT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377151 2 - 200372422 GT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                698 2 -     84244 GT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805730 2 +  53390261 AT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1242 1 -      8242 -A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40750 2 -     83289 GT
i Cricetomys_gambianus.CriGam_scaffold_14425             I 9 C 0
s Cricetulus_griseus.LT883664.1                          213113218 2 - 224834208 GT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2777 1 +     87169 G-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643250 2 -   1526836 AT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3463 2 +     50838 GC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2332 2 +     36344 GT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108644 1 -   2246927 T-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291070 2 +  12879189 CT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863211 2 -  20541912 GG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662948 2 -   1390856 GC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137733 2 -    198055 GC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96952 2 -    115145 GC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8396 2 +     14636 GT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852401 2 - 111700974 GT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4775 1 +     19438 -A
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         7815012 2 -  10337057 GG
i Elephantulus_edwardii.JH947257.1                       N 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29480 2 +    110024 tt
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11454 2 +     18970 tt
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914607 1 +  41312741 G-
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576843 2 +  14770903 GG
i Eptesicus_fuscus.JH977646.1                            I 13 C 0
s Equus_asinus.JREZ01000139.1                              3039940 2 -   4378816 GT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373874 2 +  39960074 GT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410660 2 -    498745 GT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               261030 2 +  21539334 GT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13242 2 -     24895 GT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40951 2 -     70999 GT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84913 2 +    112731 GT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41486 2 +     68309 AT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51808 2 -     65740 GT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22441 2 -     75513 AT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46634 2 -     97555 GT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3361 2 +     30972 GT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41081 2 -     52037 GT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57485 2 -    111500 GT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245236 1 - 206538554 g-
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115022 1 - 205367284 g-
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26124 1 -     30238 G-
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123025 2 -    137831 GT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6570 2 +     22493 GT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18622 2 -     32986 GT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17554 2 +     18121 GT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32679 2 -     36801 GT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4015 2 -      8343 GT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253026 2 - 186649187 GT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     175 2 -     78134 GT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13169 2 -     40692 GT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34570 2 +     49394 GT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59439 2 -     66874 GT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8312 2 -     42923 GT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15312 2 -     53142 GT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29263 1 -    327341 G-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925519 2 -  22651954 GT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11499 1 +     12639 G-
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hoolock_leuconedys.ctg274                                    141015 2 -    630532 GT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67956 1 +     83186 G-
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69831 2 +    143317 GT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4049 2 +     12352 GT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11232 2 +     55766 GT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050828 2 + 191637585 GT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799706 2 +  11177569 GT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385249 2 +   7955117 GT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     822 2 +     11955 GT
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237664 2 +   9596543 GT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41763 2 +    110728 GT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14757961 2 +  30322482 GT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2680 2 -     13097 GT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2435 2 +      5940 GT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2265 2 -      5717 GT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8629 2 -     11567 GT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10010 2 -     12945 GT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7491 2 +     29618 GT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7488 2 +     31569 GT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7499 2 +     24756 GT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7497 2 +     16388 GT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811998 1 -   3914936 G-
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16336 2 +     24238 GT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331134 2 -   1826925 GT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8783 2 +     19643 GT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042444 2 -   6120653 GT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078920 2 +  43346337 GT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613146 1 +  59628241 G-
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43451 2 -     61512 GT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371112 2 -  60120075 GT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23367 2 +     30207 GT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20470 2 -     24934 GT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23319 2 +     30527 GT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34508 2 -     50087 GT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44279 2 +     51645 GT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413448 2 - 187317192 GT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397671 2 +  25927173 GT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46835 2 -     62418 GT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23490 2 +     24253 GT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43310 2 +     59329 GT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269238 2 +    668171 GT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20425 2 +     21031 GT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 1022 2 +     17132 GT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221738 1 -    270270 -A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320522 2 +  24302211 GT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355354 2 -    752769 GT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672024 2 -    737560 ac
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219311 2 +    317179 ac
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499473 2 +  40650429 GT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148928 1 +    207569 -A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_19308             24491 1 -     74585 T-
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47122 2 -    140813 GT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427769 2 +  29670104 GT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8799 2 +     17804 GT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9304 2 -     12984 GT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17618 2 -     26561 GT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983102 2 +  93316391 GT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43491 2 +    145209 GT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183153 2 +    200668 GG
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 5 C 0
s Microtus_ochrogaster.CM001695.1                         15960891 2 +  27267610 TT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361258 1 -   8254450 -G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40159 1 -     48117 -G
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20548 2 -     27822 GT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7009 1 +     27589 G-
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50892 2 -     62432 GT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177311 2 +    366855 GA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17016 1 -     63510 G-
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37192 2 +     47283 GG
i Murina_feae.MurFea_scaffold_17764                      I 2 C 0
s Mus_caroli.FMAL02030609.1                                   5200 2 +      5579 CT
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685903 2 + 129401213 CT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58215796 2 +  89631738 ct
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495221 2 + 130317789 CT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81293 2 -     86153 GT
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 6 C 0
s Mustela_putorius.JH418006.1                             14353643 1 +  14710649 G-
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791240 2 +  10118263 gg
i Myotis_brandtii.KE162005.1                             I 2 C 0
s Myotis_davidii.KB100139.1                                4385600 2 +   6019432 GG
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                               381422 2 +   4330536 gg
i Myotis_lucifugus.GL429869.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          249 2 +     18357 GG
i Myotis_myotis.MyoMyo_scaffold_66571                    I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118075 2 +    130748 GT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              27132 2 +     34575 GT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467601 1 -  31847680 G-
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126119 2 -    149072 GA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51938 2 -    132029 GT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8033 2 -     16345 GT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13918 2 +     22201 GT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412139 2 -  22158432 GT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24316 2 -     54323 GT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196747 1 +   9404916 G-
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634795 2 + 196305487 GT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1553 2 -      3937 GT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563034 2 - 199412804 GT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549717 2 -   3988456 GT
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Octodon_degus.JH651603.1                                11045983 2 -  11899542 gc
i Octodon_degus.JH651603.1                               I 14 C 0
s Odobenus_rosmarus.KB229312.1                             1450197 1 +   2017862 G-
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91251 1 -    140218 T-
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1624 2 -     41509 GT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11892 2 -     14239 GT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102170 2 - 174332312 GT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37785 1 +    559221 G-
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38178 2 -     51505 GT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351181 2 +   1103335 GT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1471031 2 - 189151597 GT
i Pan_troglodytes.CM009242.2                             I 124 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22945 1 -    230217 G-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460271 1 -  18783137 g-
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970991 1 +   8748460 g-
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241362 2 - 183742232 GT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7826 2 +     21308 GT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288865 2 -  20919399 GT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20481 2 -     27687 GT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13617 2 +     16796 GT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20427 2 -     23640 GT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13584 1 +     78924 G-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24463 2 +     31479 GT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16822 2 -     24908 GT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       38058 2 +     38305 GA
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245343 2 +  18517816 GT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30440 2 -     56120 GT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_gordonorum.k141_381342                           61 2 -     89929 GT
i Piliocolobus_gordonorum.k141_381342                    C 0 I 135
s Piliocolobus_kirkii.k141_1310104                             649 2 +     40849 GT
i Piliocolobus_kirkii.k141_1310104                       C 0 I 135
s Piliocolobus_tephrosceles.PDMG02000141.1                  252397 2 +  14605196 GN
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 54
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1368 2 +     22231 GG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 2 C 0
s Pithecia_albicans.k141_1239476                             63400 2 +    207309 GT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4494 2 -     25401 GT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30235 2 +     58159 GT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30511 2 +     63561 GT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30274 2 +     51148 GT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555241 2 -   4542175 GT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30258 2 +     51125 GT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6663 2 +     39866 CT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1748 2 -      9282 CT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41152 2 -     87950 CT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41545 2 -     88961 CT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6244 2 -     39403 CT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41196 2 +     87928 CT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6241 2 -     60166 CT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13177 2 -     67232 CT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41093 2 -     90634 CT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42561 2 +     89403 CT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176159 2 - 189387572 GT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190977 2 -   9816681 GT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25781 2 +     69807 GT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42976 2 -     80239 GT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8669 1 +     14086 G-
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981116 2 +   4620579 GT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564583 2 -   2598838 GT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2219 2 -      7103 GT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2816 2 -     11706 GT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6552 2 -     30655 GT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32877 2 +     46564 GT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93148 2 -     98465 GT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6785 2 +     35169 GT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34663 2 +     52041 gt
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3208 1 -     18639 G-
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839367 1 -  28871421 -A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535934 1 -   4952924 -A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097584 1 +  38429054 g-
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25156 2 +     91421 GT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151649 2 -   7812017 GT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6026 2 +     72585 GT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021114 2 -  90668790 GT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913331 1 +   3329780 -A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26966 2 +     27361 GT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120333 2 + 195417433 GT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234574 2 -   7961872 GT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73350 1 -    116970 -A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2542 2 +     27962 GT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2437 2 +      6077 GT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2529 2 +      5971 GT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2471 2 +      5932 GT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               794 2 -      4390 GT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390226 2 - 209938924 GT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2419 2 +      5979 GT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3160 2 -      4301 GT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236823 2 +   5703754 GT
i Sapajus_apella.ctg103                                  I 1 C 0
s Sapajus_macrocephalus.k141_796559                           6413 2 +     21866 GT
i Sapajus_macrocephalus.k141_796559                      I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114521 2 +    313613 GT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23473 2 +     27374 GT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26992 2 +     58920 GT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13488 2 -     45317 GT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21146 2 -     42441 GT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23826 2 -     29113 GT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26895 2 -     48123 GT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_40772                    20680 2 -     32514 gt
i Sigmodon_hispidus.SigHis_scaffold_40772                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856856 2 -   1910179 GT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866831 2 +   3870691 GT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              4990 1 -     97271 G-
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123423 1 +    196729 G-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389412 2 +   1523678 GT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12174 2 +     22964 GA
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1196 2 +      5583 GT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190109 2 +    199430 GC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104060 2 -    539355 GC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5409 2 +      6850 AT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5457 2 +     20590 AT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351348 2 - 186847797 GT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22767 2 -     33621 GT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18336 1 -     31044 T-
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478217 2 -    610378 GG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19037 2 +     26378 GT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31701 2 -     78344 GT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18358 2 +     25722 GT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26652 2 -     62838 GT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26700 2 +     46913 GT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7506 2 -     28527 GT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28591 2 -     64340 GT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26628 2 -     63452 GT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8071 2 +     22490 GT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1499 2 -      6147 GT
i Trachypithecus_melamera.k141_591572                    I 69 C 0
s Trachypithecus_obscurus.k141_848057                         8404 2 -     13050 GT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253643 2 -   6242583 GT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59394 2 +     59866 GT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     721 2 -     21056 GA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180357 1 +   5085361 G-
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23761 2 -     30710 GT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22668 2 -    147434 GT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103507 1 -    112863 G-
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172609 2 -    224448 GT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27395 1 -     86975 G-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1858 2 +      2695 GT
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Dipodomys_stephensi.DipSte_scaffold_89095                   3762 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948815 0 -  37912305 C
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822 0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508 0 -   4065304 C
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Pteronotus_parnellii.KE847780.1                            50198 5 -     66298 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Piliocolobus_badius.k141_2704958                             647 0 +     55023 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_16567                    60307 9 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_galeritus.HipGal_scaffold_23202               49318 4 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3678  3 +     36723 G---------G-----A
s Acinonyx_jubatus.LLWD01001279.1                           811325  8 +   1699592 a---aaact-a-----C
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18552  2 +     63021 A---------A------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413852  9 +  29979442 C--A-AAATAA-----T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213962  9 +    347723 C--AAAACA-A-----T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16478  2 -     61208 A---------A------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 9
s Allenopithecus_nigroviridis.k141_3755588                   46004  3 +     53615 G---------G-----A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41948  3 +     44087 G---------G-----A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14586  3 -     21945 G---------G-----A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16258  3 +     32033 G---------G-----A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70711  3 -     84148 G---------C-----A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42944  3 -     78289 G---------C-----A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42390  3 +     55831 G---------C-----A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40831  3 -     64179 G---------C-----A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22478  3 -     24835 G---------C-----A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39461  3 +     45454 G---------C-----A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45159  3 +     70886 G---------C-----A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7284  3 +     30854 G---------C-----A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31423  3 +     42133 G---------C-----A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175181  8 -    412891 AG-A-A-CT-A-----C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49225  3 -     65372 G---------G-----A
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42979  3 +     43593 G---------G-----A
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670992  3 +   5030052 G---------G-----A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22634  3 -     23494 G---------G-----A
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7770  3 +      8415 G---------G-----A
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14513  2 -     32367 A---------A------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 9
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3471  8 -     15198 AG-A-A-CT-A-----T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273223  3 +  21539123 G---------G-----A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9389  3 +     48076 G---------G-----A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4526  3 -     28759 G---------G-----A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32080  3 +     44353 G---------G-----A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47450  3 -     71267 G---------G-----A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21510  3 -     33135 G---------G-----A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Cacajao_ayresi.k141_96119                                   6415  3 +     28062 G---------G-----A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41709  3 -     91139 G---------G-----A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19235  3 +     95584 G---------G-----A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19148  3 +    119600 G---------G-----A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8694  3 +     18648 G---------G-----A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8232  3 -     13885 G---------G-----A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             300  3 -      8861 G---------G-----A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452693  3 + 189096842 G---------G-----A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                216  3 +      8664 G---------G-----A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42503878  9 +  60362399 C--A-AAATGA-----T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7514  9 -     23171 C--A-AAATGA-----T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220857  9 +   9314153 C--A-AAATGA-----T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41613992  9 +  59632846 C--A-AAATGA-----T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105573  9 -  63665305 C--A-AAATGA-----T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268779  3 +    496798 A---------A-----A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3763  8 +      5315 AG-A-A-CG-A-----C
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20184  2 -     39886 A---------A------
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994444  2 +  23392119 A---------T------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997886  2 +  23407841 A---------T------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60987  2 -     66877 A---------T------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3613  3 -     12580 G---------G-----A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41668  3 +     53515 G---------G-----A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369606  3 -  26074798 G---------G-----A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6495  3 -     34880 G---------G-----A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65590  3 -     89041 G---------G-----A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          703  3 -      5494 A---------A-----A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490658  8 -  27778364 A--A-AACT-A-----C
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17491  8 +     27315 A--A-AACT-A-----C
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139183  3 -   4669795 G---------G-----A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42923  3 +     47900 G---------G-----A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42756  3 -     44860 G---------G-----A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42739  3 -    148725 G---------G-----A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9996  3 -     17524 G---------G-----A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25718  3 -     34525 G---------G-----A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30194  3 -     45857 G---------G-----A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23687  3 +     70610 G---------G-----A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20612  3 +     36323 G---------G-----A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11303  9 -     19938 A--AAATCT-T-----C
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7496  3 -     32913 G---------G-----A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17909  3 -     40346 G---------G-----A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18164  3 +    216457 G---------G-----A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17957  3 +     39636 G---------G-----A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2546  3 +      5346 G---------G-----A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41044  3 -    112038 G---------G-----A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6616  3 +     34062 G---------G-----A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341509  3 +  18827391 G---------G-----A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8054  3 -     44032 G---------G-----A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302834  3 - 135778131 G---------G-----A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10358  9 +     15858 A--AAATCT-T-----C
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601934  9 -    839153 A--AAATCT-T-----C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407275  3 -   2368649 G---------G-----A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377153  3 - 200372422 G---------G-----A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                700  3 -     84244 G---------G-----A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805732  8 +  53390261 A--A-AACT-A-----C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1243  8 -      8242 AG-A-A-CT-A-----C
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40752  2 -     83289 A---------A------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113220  2 - 224834208 A---------A------
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2778  8 +     87169 A--A-AACT-A-----T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643252  2 -   1526836 A---------A------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3465  2 +     50838 A---------A------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2334  2 +     36344 A---------A------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108645  9 -   2246927 C--AAATCT-T-----C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863213  8 -  20541912 AG-A-A-CT-A-----C
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662950  8 -   1390856 A---aaact-a-----c
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137735  8 -    198055 A--A-AACT-A-----C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96954  2 -    115145 A---------A------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8398  2 +     14636 A---------T------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852403  8 - 111700974 A--A-AGCA-A-----T
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4776 11 +     19438 AGGAGAGCT-A-----C
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         7815014  8 -  10337057 A--A-AGCC-A-----A
i Elephantulus_edwardii.JH947257.1                       C 0 N 0
s Ellobius_lutescens.LOEQ01008920.1                          29482  2 +    110024 a---------a------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11456  2 +     18970 a---------a------
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914608  9 +  41312741 C--AAAACA-A-----T
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                             12576845  8 +  14770903 AG-A-A-CT-C-----C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039942  8 -   4378816 G--A-AACG-A-----C
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373876  8 +  39960074 G--A-AACG-A-----C
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410662  8 -    498745 G--A-AACG-A-----C
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               261032  3 +  21539334 G---------G-----A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186245237  8 - 206538554 a---aaact-a-----C
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115023  8 - 205367284 a---aaact-a-----C
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26125  8 -     30238 A--A-AACT-A-----C
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17556  3 +     18121 A---------A-----C
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32681  2 -     36801 A---------A------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 7
s Gorilla_beringei.k141_3358147                               4017  3 -      8343 G---------G-----A
i Gorilla_beringei.k141_3358147                          C 0 I 33
s Gorilla_gorilla.LT578341.1                                253028  3 - 186649187 G---------G-----A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     177  2 -     78134 A---------A------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 7
s Helogale_parvula.HelPar_flattened_line_2585                29264  8 -    327341 A--A-AACT-A-----C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925521  2 -  22651954 a---------a------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11500  8 +     12639 A--A-AGCT-A-----T
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49322  2 +     49977 ----------A-----T
i Hipposideros_galeritus.HipGal_scaffold_23202           I 4 C 0
s Hoolock_leuconedys.ctg274                                    141017  3 -    630532 G---------G-----A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67957  8 +     83186 A--A-AACG-A-----C
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69833  2 +    143317 A---------T------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4051  3 +     12352 G---------G-----A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11234  3 +     55766 G---------G-----A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050830  3 + 191637585 G---------G-----A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799708  3 +  11177569 G---------G-----A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385251  2 +   7955117 A---------A------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 9
s Jaculus_jaculus.JH725527.1                               1237666  2 +   9596543 A---------A------
i Jaculus_jaculus.JH725527.1                             C 0 I 9
s Lagothrix_lagothricha.k141_246028                          41765  3 +    110728 G---------G-----A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60316  2 -     65777 ----------A-----C
i Lasiurus_borealis.LasBor_scaffold_16567                I 9 C 0
s Leontocebus_fuscicollis.k141_2994775                        2682  3 -     13097 G---------G-----A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2437  3 +      5940 G---------G-----A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2267  3 -      5717 G---------G-----A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8631  3 -     11567 G---------G-----A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10012  3 -     12945 G---------G-----A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        811999  9 -   3914936 C--AAAACA-A-----T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16338  8 +     24238 A---------AAACTAC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331136  3 -   1826925 G---------G-----A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39078922  8 +  43346337 A--A-AGCT-A-----T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613147  9 +  59628241 C--A-AAATGA-----T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43453  3 -     61512 G---------G-----A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371114  3 -  60120075 G---------G-----A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23369  3 +     30207 G---------G-----A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20472  3 -     24934 G---------G-----A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23321  3 +     30527 G---------G-----A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34510  3 -     50087 G---------G-----A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44281  3 +     51645 G---------G-----A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413450  3 - 187317192 G---------G-----A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397673  3 +  25927173 G---------G-----A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46837  3 -     62418 G---------G-----A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23492  3 +     24253 G---------G-----A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43312  3 +     59329 G---------G-----A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269240  3 +    668171 G---------G-----A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20427  3 +     21031 G---------G-----A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 1024  3 +     17132 G---------G-----A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221739 11 -    270270 AGGAGAACT-A-----C
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320524  3 +  24302211 G---------G-----A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355356  3 -    752769 G---------G-----A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672026  8 -    737560 a---aaact-A-----C
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219313  8 +    317179 a---aaact-a-----c
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499475  2 +  40650429 A---------A------
i Marmota_marmota.CZRN01000018.1                         C 0 I 9
s Megaderma_lyra.MegLyr_scaffold_4542                       148932  2 +    207569 ----------A-----C
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24492  9 -     74585 C--AAAACA-A-----T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47124  2 -    140813 A---------A------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427771  2 +  29670104 A---------A------
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8801  3 +     17804 G---------G-----A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9306  3 -     12984 G---------G-----A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17620  3 -     26561 G---------G-----A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43493  8 +    145209 A--A-AGCA-A-----T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183155  8 +    200668 AG-A-A-CT-A-----C
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960893  2 +  27267610 C---------A------
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361259  8 -   8254450 AG-A-A-CT-A-----C
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_23309             40160  8 -     48117 AG-A-A-CT-A-----C
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 1
s Miopithecus_ogouensis.k141_1534655                         20550  3 -     27822 G---------G-----A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7010  9 +     27589 C--AAAACA-A-----T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177313  8 +    366855 AG-A-A-CC-A-----T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17017  8 -     63510 A--A-AACT-A-----T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37194  8 +     47283 AG-A-A-CT-A-----C
i Murina_feae.MurFea_scaffold_17764                      C 0 I 7
s Mus_caroli.FMAL02030609.1                                   5202  2 +      5579 A---------A------
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685905  2 + 129401213 A---------A------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58215798  2 +  89631738 t---------a------
i Mus_pahari.LT608297.1                                  C 0 I 22
s Mus_spretus.CM004101.1                                  39495223  2 + 130317789 A---------A------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81295  2 -     86153 A---------A------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 7
s Mustela_putorius.JH418006.1                             14353644  9 +  14710649 C--AAAACA-A-----T
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myotis_brandtii.KE162005.1                               9791242  8 +  10118263 AG-A-A-CT-A-----C
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385602  8 +   6019432 AG-A-A-CT-A-----C
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381424  8 +   4330536 AG-A-A-CT-A-----C
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          251  8 +     18357 AG-A-A-CT-A-----C
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118077  9 +    130748 A--AAATCA-C-----C
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              27134  3 +     34575 G---------G-----A
i Nasalis_larvatus.k141_1350636                          C 0 I 69
s Neomonachus_schauinslandi.NINY01007730.1                11467602  9 -  31847680 C--AAAACA-A-----T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126121  8 -    149072 AG-A-A-CG-A-----T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51940  3 -    132029 G---------G-----A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8035  3 -     16345 G---------G-----A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13920  3 +     22201 G---------G-----A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412141  3 -  22158432 G---------G-----A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24318  3 -     54323 G---------G-----A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196748  9 +   9404916 C--A-AAATGA-----T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2549719  8 -   3988456 G---------AAACTAT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11045985  2 -  11899542 a---------a------
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450198  9 +   2017862 C--AAAACA-A-----T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91252  2 -    140218 A---------A------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1626  2 -     41509 A---------A------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 3
s Orycteropus_afer.OryAfe_flattened_line_171931              11894  8 -     14239 G--A-AACT-A-----T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102172  8 - 174332312 A---------AAACTAC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37786  9 +    559221 C--A-AAATGA-----T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Pan_troglodytes.CM009242.2                               1471033  3 - 189151597 G---------G-----A
i Pan_troglodytes.CM009242.2                             C 0 I 33
s Panthera_onca.PanOnc_flattened_line_3271                   22946  8 -    230217 A--A-AACT-A-----C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460272  8 -  18783137 a---aaact-a-----C
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3970992  8 +   8748460 a---aaact-a-----C
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241364  3 - 183742232 G---------G-----A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7828  3 +     21308 G---------G-----A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288867  3 -  20919399 G---------G-----A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20483  3 -     27687 G---------G-----A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13619  3 +     16796 G---------G-----A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20429  3 -     23640 G---------G-----A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13585  8 +     78924 A--A-AACT-T-----C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       38060  2 +     38305 A---------A------
i Perognathus_longimembris.PerPac_flattened_line_28053   C 0 I 8
s Peromyscus_maniculatus.KI615324.1                         245345  2 +  18517816 A---------A------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30442  2 -     56120 A---------A------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             647  3 +     55023 G---------G-----A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          198  3 -     89929 G---------G-----A
i Piliocolobus_gordonorum.k141_381342                    I 135 C 0
s Piliocolobus_kirkii.k141_1310104                             786  3 +     40849 G---------G-----A
i Piliocolobus_kirkii.k141_1310104                       I 135 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252453  3 +  14605196 G---------G-----A
i Piliocolobus_tephrosceles.PDMG02000141.1               I 54 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1370  8 +     22231 AG-A-A-CT-C-----C
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63402  3 +    207309 G---------G-----A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4496  3 -     25401 G---------G-----A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30237  3 +     58159 G---------G-----A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30513  3 +     63561 G---------G-----A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30276  3 +     51148 G---------G-----A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555243  3 -   4542175 G---------G-----A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30260  3 +     51125 G---------G-----A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6665  3 +     39866 G---------G-----A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1750  3 -      9282 G---------G-----A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41154  3 -     87950 G---------G-----A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41547  3 -     88961 G---------G-----A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6246  3 -     39403 G---------G-----A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41198  3 +     87928 G---------G-----A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6243  3 -     60166 G---------G-----A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13179  3 -     67232 G---------G-----A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41095  3 -     90634 G---------G-----A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42563  3 +     89403 G---------G-----A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176161  3 - 189387572 G---------G-----A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190979  3 -   9816681 G---------G-----A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25783  3 +     69807 G---------G-----A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42978  3 -     80239 G---------G-----A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8670  8 +     14086 A--A-AGCT-A-----T
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34665  2 +     52041 a---------a------
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50203  2 -     66298 ----------A-----C
i Pteronotus_parnellii.KE847780.1                        I 5 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3209  9 -     18639 C--AAAACA-A-----T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 1
s Pteropus_alecto.KB030862.1                               5839368 11 -  28871421 AGGAGAACT-A-----C
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535935 11 -   4952924 AGGAGAACT-A-----C
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097585  8 +  38429054 a---aaact-a-----C
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25158  3 +     91421 G---------G-----A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151651  3 -   7812017 G---------G-----A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6028  3 +     72585 G---------G-----A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021116  2 -  90668790 A---------A------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913332  8 +   3329780 AG-A-A-CT-A-----C
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            26968  3 +     27361 G---------G-----A
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120335  3 + 195417433 G---------G-----A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234576  3 -   7961872 G---------G-----A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73351  8 -    116970 AG-A-A-CT-A-----C
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2544  3 +     27962 G---------G-----A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2439  3 +      6077 G---------G-----A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2531  3 +      5971 G---------G-----A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2473  3 +      5932 G---------G-----A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               796  3 -      4390 G---------G-----A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390228  3 - 209938924 G---------G-----A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2421  3 +      5979 G---------G-----A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3162  3 -      4301 G---------G-----A
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236825  3 +   5703754 G---------G-----A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6415  3 +     21866 G---------G-----A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114523  8 +    313613 A--A-AACT-A-----C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23475  3 +     27374 G---------G-----A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26994  3 +     58920 G---------G-----A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13490  3 -     45317 G---------G-----A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21148  3 -     42441 G---------G-----A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23828  3 -     29113 G---------G-----A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26897  3 -     48123 G---------G-----A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_40772                    20682  2 -     32514 a---------a------
i Sigmodon_hispidus.SigHis_scaffold_40772                C 0 I 56
s Solenodon_paradoxus.SolPar_flattened_line_126            1856858  8 -   1910179 C--A-AAAT-A-----C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866833  2 +   3870691 A---------A------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 9
s Spilogale_gracilis.SpiGra_flattened_line_13525              4991  9 -     97271 C--AAAACA-G-----T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123424  8 +    196729 AG-A-A-CT-A-----C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389414  3 +   1523678 G---------G-----A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12176  8 +     22964 AG-A-A-CT-A-----T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1198  9 +      5583 A--AAATCA-C-----C
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190111  8 +    199430 A--A-AACT-A-----C
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104062  8 -    539355 A--A-AACT-A-----C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5411  3 +      6850 A---------A-----A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5459  3 +     20590 A---------A-----A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351350  3 - 186847797 G---------G-----A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22769  2 -     33621 C---------A------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18337  9 -     31044 A--AAATCC-T-----C
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478219  8 -    610378 AG-A-A-CT-A-----C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19039  3 +     26378 G---------G-----A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31703  3 -     78344 G---------G-----A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18360  3 +     25722 G---------G-----A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26654  3 -     62838 G---------G-----A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26702  3 +     46913 G---------G-----A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7508  3 -     28527 G---------G-----A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28593  3 -     64340 G---------G-----A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26630  3 -     63452 G---------G-----A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8073  3 +     22490 G---------G-----A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1501  3 -      6147 G---------G-----A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8406  3 -     13050 G---------G-----A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253645  3 -   6242583 G---------G-----A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59396  3 +     59866 G---------G-----A
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     723  8 -     21056 A--A-AACT-A-----T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180358  9 +   5085361 C--A-AAATAA-----T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103508  9 -    112863 C--A-AAATGA-----T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172611  2 -    224448 A---------A------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 9
s Zalophus_californianus.ZalCal_flattened_line_17732         27396  9 -     86975 C--AAAACA-A-----T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1860  2 +      2695 T---------A------
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 9
e Dipodomys_stephensi.DipSte_scaffold_89095                   3762  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18948815  0 -  37912305 C
e Perodicticus_potto.k141_1854441                            16824  0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          24465  0 +     31479 C
e Otolemur_garnettii.GL873799.1                             351183  0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        38180  0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563036  0 - 199412804 C
e Nycticebus_coucang.k141_3846325                             1555  0 -      3937 C
e Nycticebus_bengalensis.LG01                             93634797  0 + 196305487 C
e Loris_tardigradus.ctg83                                  5042446  0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            8785  0 +     19643 C
e Galagoides_demidoff.k141_561628                            18624  0 -     32986 C
e Galago_senegalensis.k141_991736                             6572  0 +     22493 C
e Galago_moholi.ctg3793                                     123027  0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508  0 -   4065304 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Varecia_variegata.k141_289850                              22670  0 -    147434 C
e Varecia_rubra.k141_787544                                  23763  0 -     30710 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Propithecus_verreauxi.k141_1047036                          6787  0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       93150  0 -     98465 C
e Propithecus_perrieri.k141_1496898                          32879  0 +     46564 C
e Propithecus_edwardsi.k141_635656                            6554  0 -     30655 C
e Propithecus_diadema.k141_153680                             2818  0 -     11706 C
e Propithecus_coronatus.k141_209299                           2221  0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1564585  0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1981118  0 +   4620579 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mirza_zaza.k141_766280                                     50894  0 -     62432 C
e Microcebus_murinus.CM007674.1                           74983104  0 +  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       7499  0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          7501  0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              7490  0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          7493  0 +     29618 C
e Lemur_catta.scaffold_24                                 14757963  0 +  30322482 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Indri_indri.k141_2415743                                     824  0 +     11955 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Hapalemur_occidentalis.k141_578367                         15314  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          8314  0 -     42923 C
e Hapalemur_griseus.k141_763500                              59441  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             34572  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          13171  0 -     40692 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eulemur_sanfordi.k141_1122526                              57487  0 -    111500 C
e Eulemur_rufus.k141_514691                                  41083  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            3363  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46636  0 -     97555 C
e Eulemur_macaco.k141_1562045                                22443  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 51810  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             41488  0 +     68309 C
e Eulemur_coronatus.k141_384460                              84915  0 +    112731 C
e Eulemur_collaris.k141_601111                               40953  0 -     70999 C
e Eulemur_albifrons.k141_51491                               13244  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        291072  0 +  12879189 C
e Cheirogaleus_medius.k141_759766                             3652  0 -     15404 C
e Cheirogaleus_major.k141_666340                             29136  0 -     33796 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               4707  0 -     19611 C
e Avahi_laniger.k141_2756659                                  4701  0 +     11645 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3681 33 +     36723 ACCAACA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
s Acinonyx_jubatus.LLWD01001279.1                           811333 20 +   1699592 -----CA-C-A----------AT-C----AT----------AG-GC-TTT-----GT----------GC--------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18554 34 +     63021 ---------AAATA--CAATAAC-G----AC----------AG-GC-TTA-----AT----------GG-A----TG-ACCTA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413861 20 +  29979442 -----CA-G-A----------AT-C----AT----------AG-GC-TTT-----GT----------GG--------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213971 20 +    347723 -----AA-G-A----------AT-C----GT----------AG-GT-TTT-----GT----------GT--------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16489 24 -     61208 ---------A-----------AA-C----AC----------AG-AT-TTC-----AT----------GG-A----AG--GCCG
i Allactaga_bullata.AllBul_scaffold_20030                I 9 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46007 33 +     53615 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41951 33 +     44087 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14589 33 -     21945 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16261 33 +     32033 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70714 33 -     84148 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCGG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42947 33 -     78289 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCGG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42393 33 +     55831 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCGG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40834 33 -     64179 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCGG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22481 33 -     24835 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCGG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39464 33 +     45454 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCGG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45162 33 +     70886 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCGG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7287 33 +     30854 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCGG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31426 33 +     42133 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCGG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175189 20 -    412891 -----CA-G-A----------AT-C----AC----------AG-GA-TTC-----AT----------GG--------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 10
s Aotus_azarae.k141_118258                                   49228 33 -     65372 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             42982 33 +     43593 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                670995 33 +   5030052 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22637 33 -     23494 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7773 33 +      8415 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14524 26 -     32367 ---------A-----------AT-C----AC----------TGGGT-TAC-----AT----------GA-A----TG-ATTTG
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 9 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3479 20 -     15198 -----TA-G-A----------AT-C----AC----------CA-GA-TTC-----AT----------GA--------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 10
s Ateles_geoffroyi_b.tarseq_1536                               273226 33 +  21539123 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9392 33 +     48076 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4529 33 -     28759 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32083 33 +     44353 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47453 33 -     71267 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21513 33 -     33135 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4701 26 +     11645 --------AA-----------AA-C----CC----------AG-TC-TTC-----AT----------GG-A----TG-ACCTG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4707 26 -     19611 --------AA-----------AA-C----TC----------AG-TC-TTC-----AT----------GG-A----TG-ACCTG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6418 33 +     28062 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-G----TG-ACCTG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41712 33 -     91139 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-G----TG-ACCTG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19238 33 +     95584 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-G----TG-ACCTG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19151 33 +    119600 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-G----TG-ACCTG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8697 33 +     18648 ACCAGCA-GA-----------AT-T----CC----------CG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8235 33 -     13885 ACCAGGA-GA-----------AT-C----CC----------CG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             303 33 -      8861 ACCAGCA-GA-----------AT-C----CC----------CG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452696 33 + 189096842 ACCAGCA-GA-----------AT-C----CC----------CG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                219 33 +      8664 ACCAGCA-GA-----------AT-C----CC----------CG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42503887 20 +  60362399 -----CA-G-A----------AT-C----AT----------AT-GC-TTT-----GT----------GG--------------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7523 20 -     23171 -----CA-G-A----------AT-C----AT----------AT-GC-TTT-----GT----------GG--------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220866 20 +   9314153 -----CA-G-A----------AT-C----AT----------AT-GC-TTT-----GT----------GG--------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614001 20 +  59632846 -----CA-G-A----------AT-C----AT----------AT-GC-TTT-----GT----------GG--------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105582 20 -  63665305 -----CA-G-A----------AT-C----AT----------AT-GC-TTT-----GT----------GG--------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268782 33 +    496798 ACTATT-AGA-----------AT-C----AC----------AA-GC-TTC-----AC----------AA-A----TG-ACCTG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3771 20 +      5315 -----TG-G----------G-AT-C----AC----------AG-GA-TTC-----AT----------GG--------------
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 10
s Castor_canadensis.CasCan_scaffold_39952                    20186  3 -     39886 ---------A-----------AG------------------------------------------------------------
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 1
s Cavia_aperea.AVPZ01000300.1                              4994446 35 +  23392119 ---------A-----------AC-T----ACCAGAATTAA-AT-GT-TTCA----TT----------GG-A----CA-TCCTG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997888 35 +  23407841 ---------A-----------AC-T----ACCAGAATCAA-AT-GT-TTCA----TT----------GG-A----CA-TCCTG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       60989 35 -     66877 ---------A-----------AC-T----ACCAGAATCAA-AT-GT-TTCA----TT----------GG-A----CA-TCCTG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3616 33 -     12580 ACCAGCA-GA-----------AT-C----CC----------TG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41671 33 +     53515 ACCAGCA-GA-----------AT-C----CC----------CG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369609 33 -  26074798 ACCAGCA-GA-----------AT-C----CA----------GG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6498 33 -     34880 ACCAGCA-GA-----------AT-C----CA----------GG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65593 33 -     89041 ACCAGCA-GA-----------AT-C----CA----------GG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          706 32 -      5494 ACTACT--GA-----------AT-C----AC----------AA-GC-TTC-----AC----------AA-A----TG-ACCTG
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490666 20 -  27778364 -----CA-G-A----------AT-C----AC----------AG-GC-TTC-----GT----------GG--------------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17499 20 +     27315 -----CA-G-A----------AT-C----AC----------AG-GC-TTC-----GT----------GG--------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139186 33 -   4669795 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42926 33 +     47900 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42759 33 -     44860 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42742 33 -    148725 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                             9999 33 -     17524 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25721 33 -     34525 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30197 33 -     45857 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23690 33 +     70610 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20615 33 +     36323 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11312 28 -     19938 -----TG-GA-----------AT-C----AC----------AG-CC-TTC-----CT----------GG-A----TG-AACTG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29136 17 -     33796 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------G---------------
i Cheirogaleus_major.k141_666340                         C 0 I 5
s Cheirogaleus_medius.k141_759766                             3652 17 -     15404 --------AA-----------AA-C----AT----------AG-GC-TTC-----AT----------G---------------
i Cheirogaleus_medius.k141_759766                        C 0 I 5
s Cheracebus_lucifer.k141_2312002                             7499 33 -     32913 ACCAGCA-GA-----------AT-C----AC----------AG-CC-TTC-----AT----------GG-A----TG-ACCTG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17912 33 -     40346 ACCAGCA-GA-----------AT-C----AC----------AG-CC-TTC-----AT----------GG-A----TG-ACCTG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18167 33 +    216457 ACCAGCA-GA-----------AT-C----AC----------AG-CC-TTC-----AT----------GG-A----TG-ACCTG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17960 33 +     39636 ACCAGCA-GA-----------AT-C----AC----------AG-CC-TTC-----AT----------GG-A----TG-ACCTG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2549 33 +      5346 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41047 33 -    112038 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-G----TG-ACCTG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6619 33 +     34062 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-G----TG-ACCTG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341512 33 +  18827391 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8057 33 -     44032 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302837 33 - 135778131 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10367 28 +     15858 -----TG-GA-----------AT-C----AC----------AG-GC-TTC-----CT----------GG-A----TG-ACCTG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601943 28 -    839153 -----TG-GA-----------AT-C----AC----------AG-GC-TTC-----CT----------GG-A----TG-ACCTG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_13368               21217 14 +     34467 -------------------------------------------------T-----TC----------CT-A---TAA-GCCTG
i Chrysochloris_asiatica.ChrAsi_scaffold_13368           N 0 N 0
s Colobus_angolensis.KN981557.1                             407278 33 -   2368649 CACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377156 33 - 200372422 CACAGCA-AA-----------AT-C----AC----------AG-GC-CTC-----GT----------GG-A----TG-ACCTG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                703 33 -     84244 CACAGCA-AA-----------AT-C----AC----------AG-GC-CTC-----GT----------GG-A----TG-ACCTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805740 30 +  53390261 -----CC-A-A----------AT-C----CT----------AG-AT-TTT-----GTGGATGACCTGGG--------------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1251 18 -      8242 -----CA-G-A----------AT-C----A------------G-GC-TTC-----AT----------GG--------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 10
s Cricetomys_gambianus.CriGam_scaffold_14425                 40754 24 -     83289 ---------AAATA-A-AAGAGC-C----AA----------AG-GC-TTC-----AT--------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 6
s Cricetulus_griseus.LT883664.1                          213113222 34 - 224834208 ---------AAACATA-A-GAAT-C----AA----------AA-GC-TTC-----AT----------GG-A----TG-ATCTG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2786 20 +     87169 -----CA-G-A----------AT-T----AT----------AG-GC-TTT-----GT----------GC--------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643254 26 -   1526836 ---------A-----------AC-G----AT----------AG-GC-TTCA----AC----------CG-A----TG-ACCTG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3467 35 +     50838 ---------A-----------CA-T----TAGAGAATCAG-GA-GT-TTGA----AT----------GG-G----CA-ACCTG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2336 35 +     36344 ---------A-----------AC-T----ACCAGAATCAT-GG-GT-TTCA----GT----------GG-A----TA-ACCTG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108654 28 -   2246927 -----TG-GA-----------AT-C----AC----------AG-CC-TTC-----CT----------GG-A----TG-ACCTG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291072 26 +  12879189 --------AA-----------AA-C----AC----------AG-GC-TTC-----AG----------GG-A----TG-ACCTG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863221 20 -  20541912 -----CA-G-A----------AT-C----GC----------AG-GA-TCC-----AT----------GG--------------
i Desmodus_rotundus.KZ672289.1                           C 0 I 10
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662958 20 -   1390856 -----ca-g-----------aat-c----ac----------ag-gc-tTC-----GT----------GG--------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137743 20 -    198055 -----CA-G-A----------AT-C----AC----------AG-GC-TTC-----GT----------GG--------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96956 35 -    115145 ---------A-----------AC-T----GCCAGAATCAG-GA-GT-TTCA----GT----------AG-A----TA-ACCTG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948815 25 -  37912305 ---------A-----------AT-C----AC----------AA-GC-TTC-----AT----------GG-A----TG-ACCTG
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3762 25 -     10735 ---------A-----------AT-C----AC----------AA-GC-TTC-----AT----------GG-A----TG-ACCTG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8400 35 +     14636 ---------A-----------AC-T----ACCAGAATCAA-GT-GT-TTCA----TT----------GG-A----TA-ACTTG
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852411 32 - 111700974 -----TG-AA-----------AT-C----AT----------CG-GC-TTC-----CT----------GG-AGAACCT-GCCTG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4787 20 +     19438 -----CA-G-A----------AT-C----AA----------AA-GC-TTT-----GT----------GG--------------
i Eidolon_helvum.AWHC01266696.1                          C 0 I 10
s Elephantulus_edwardii.JH947257.1                         9105958 27 -  10337057 -----ga--a-----------at-c----at----------tA-GC-TTC-----CT----------AT-A-A---G-ACCTG
i Elephantulus_edwardii.JH947257.1                       N 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29484 34 +    110024 ---------gAACA--CAAGAAC-C----AA----------AG-TC-TTC-----AT----------GG-T----TG-ACCTG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11458 34 +     18970 ---------gAACA--CAAGAAC-C----AC----------AG-GC-TTC-----AT----------GG-T----TG-ACCTG
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914618 16 +  41312741 ---------------------AT-C----AT----------AG-GC-TTT-----GT----------GG--------------
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                             12576853 20 +  14770903 -----CA-G-A----------AT-C----AC----------AG-GA-TTT-----GT----------GG--------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 10
s Equus_asinus.JREZ01000139.1                              3039950 19 -   4378816 -----CA-G------------AT-G----GT----------AG-AT-GAC-----CT----------GG--------------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373884 19 +  39960074 -----CA-G------------AT-G----GT----------AG-AT-GAC-----CT----------GG--------------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410670 19 -    498745 -----CA-G------------AT-G----GT----------AG-AT-GAC-----CT----------GG--------------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               261035 33 +  21539334 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13244 26 -     24895 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40953 26 -     70999 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84915 26 +    112731 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41488 26 +     68309 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51810 26 -     65740 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22443 26 -     75513 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46636 26 -     97555 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3363 25 +     30972 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT-----------G-A----TG-ACCTG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41083 26 -     52037 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57487 26 -    111500 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245245 20 - 206538554 -----CA-C-A----------AT-C----GT----------AG-GC-TTT-----GT----------GC--------------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115031 20 - 205367284 -----CA-C-A----------AT-C----GT----------AG-GC-TTT-----GT----------GC--------------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26133 20 -     30238 -----CA-C-A----------AT-C----AT----------AG-GC-TTT-----GT----------GC--------------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123027 26 -    137831 --------GA-----------AA-G----TC----------AG-GC-TTC-----AC----------GG-A----TG-ACCAG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6572 26 +     22493 --------GA-----------AA-G----TC----------AG-GC-TTC-----AT----------GG-A----TG-ACCAG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18624 26 -     32986 --------GA-----------AA-A----TC----------AG-GC-CTC-----AT----------GG-A----TG-ACTGG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17559 28 +     18121 -----CA-GA-----------AC-C----AC----------AG-GT-TTC-----AT----------GG-A----TG-ACCTG
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32690 25 -     36801 ---------A-----------AT-C----AC----------AG-GT-TTC-----AT----------GG-A----TG-ACCTG
i Glis_glis.GliGli_scaffold_33859                        I 7 C 0
s Gorilla_beringei.k141_668773                                 973 33 -      1303 ACCAACA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Gorilla_beringei.k141_668773                           I 38 n 33
s Gorilla_gorilla.LT578341.1                                253031 33 - 186649187 ACCAACA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     186 25 -     78134 ---------A-----------AT-C----AC----------AG-GT-TTC-----AT----------GG-A----TA-ACCTC
i Graphiurus_murinus.GraMur_scaffold_10447               I 7 C 0
s Hapalemur_alaotrensis.k141_330369                          13171 26 -     40692 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34572 26 +     49394 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59441 26 -     66874 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8314 26 -     42923 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15314 26 -     53142 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29272 20 -    327341 -----CA-G-A----------AT-A----AT----------AG-GC-TTT-----GT----------GC--------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925523 35 -  22651954 ---------g-----------ac-c----atcagaatcat-gg-GT-CTTA----AT----------GG-A----TA-ACCTG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11508 28 +     12639 -----TA-GA-----------GT-C----AC----------AG-GC-TTT-----CT----------GG-C----CA-ACCTT
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49324 20 +     49977 -----CA-G-A----------AT-C----AC----------AG-GC-TTC-----GT----------GG--------------
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 10
s Hoolock_leuconedys.ctg274                                    141020 33 -    630532 ACCAGCA-GA-----------AT-C----AC----------AG-AC-TTC-----AT----------GG-A----TG-ACCTG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67965 20 +     83186 -----CA-G-A----------AT-C----AC----------AA-GC-TAT-----GT----------GC--------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69835 35 +    143317 ---------G-----------AC-T----ACCAGAATCAA-GT-GT-TTGA----TT----------GG-A----TA-ACCTG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4054 33 +     12352 ACCAGCA-GA-----------AT-C----AC----------AG-AC-TTC-----AT----------GG-A----TG-ACCTG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11237 33 +     55766 ACCAGCA-GA-----------AT-C----AC----------AG-AC-TTC-----AT----------GG-A----TG-ACCTG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050833 33 + 191637585 ACCAGCA-GA-----------AT-C----AC----------AG-AC-TTC-----AT----------GG-A----TG-ACCTG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799711 33 +  11177569 ACCAGCA-GA-----------AT-C----AC----------AG-AC-TTC-----AT----------GG-A----TG-ACCTG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385262 25 +   7955117 ---------A-----------AT-C----AC----------AG-GT-TTT-----AT----------GA-A----TG-ATCTG
i Ictidomys_tridecemlineatus.JH393364.1                  I 9 C 0
s Indri_indri.k141_2415743                                     824 26 +     11955 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-AGCTG
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237677 24 +   9596543 ---------A-----------AG-C----AC----------AG-AT-TTC-----AG----------GG-A----AG--ACTG
i Jaculus_jaculus.JH725527.1                             I 9 C 0
s Lagothrix_lagothricha.k141_246028                          41768 33 +    110728 ACCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60318 20 -     65777 -----CA-G-------C----AT-C----AC----------AG-GA-TTT-----GT----------GG--------------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 10
s Lemur_catta.scaffold_24                                 14757963 26 +  30322482 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2685 33 -     13097 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2440 33 +      5940 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2270 33 -      5717 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTT-----AT----------GG-A----TG-ACCTG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8634 33 -     11567 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10015 33 -     12945 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7493 26 +     29618 --------AA-----------AA-C----AC----------AG-GC-TTA-----AT----------GG-A----TG-ACCTG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7490 26 +     31569 --------AA-----------AA-C----AC----------AG-GC-TTA-----AT----------GG-A----TG-ACCTG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7501 26 +     24756 --------AA-----------AA-C----AC----------AG-GC-TTA-----AT----------GG-A----TG-ACCTG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7499 26 +     16388 --------AA-----------AA-C----AC----------AG-GC-TTA-----AT----------GG-A----TG-ACCTG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812008 20 -   3914936 -----AA-G-A----------AT-C----AT----------AG-GC-TTT-----GT----------GG--------------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16346 27 +     24238 -----CA-GC-----------AT-C----AT----------AG-GC-TTC------T----------GG-A----AG-ACCCA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331139 33 -   1826925 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8785 26 +     19643 --------GA-----------AA-A----TC----------AG-GC-TTC-----AT----------GG-A----TG-ACCGG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042446 26 -   6120653 --------GA-----------AA-A----TC----------AG-GC-TTC-----AT----------GG-A----TG-ACCGG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078930 28 +  43346337 -----TA-GA-----------GT-C----AT----------AG-GT-CTT-----CT----------GG-A----TG-ACCTG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613156 20 +  59628241 -----CA-G-A----------AT-C----AT----------AT-GC-TTT-----GT----------GG--------------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43456 33 -     61512 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371117 33 -  60120075 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23372 33 +     30207 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20475 33 -     24934 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23324 33 +     30527 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34513 33 -     50087 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44284 33 +     51645 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413453 33 - 187317192 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397676 33 +  25927173 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46840 33 -     62418 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23495 33 +     24253 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43315 33 +     59329 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269243 33 +    668171 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20430 33 +     21031 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 1027 33 +     17132 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221750 20 -    270270 -----CA-G-A----------AT-C----AA----------AA-GC-TTT-----GT----------GG--------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 10
s Mandrillus_leucophaeus.scaffold280                        320527 33 +  24302211 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355359 33 -    752769 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672034 24 -    737560 -----CA-G-A----------AT-CAAGCAC----------AG-GC-TTC-----AT----------GA--------------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219321 24 +    317179 -----cA-G-A----------AT-CAAGCAT----------AG-GC-TTC-----AT----------GA--------------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499486 25 +  40650429 ---------A-----------AT-C----AC----------AG-GT-TTT-----AT----------GA-A----TG-ATCTG
i Marmota_marmota.CZRN01000018.1                         I 9 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148934 20 +    207569 -----CA-G-A----------AT-C----AC----------AG-GC-TTC-----GT----------GG--------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 10
s Mellivora_capensis.MelCap_flattened_line_19308             24501 20 -     74585 -----AA-G-A----------AT-C----AT----------AG-GC-TTT-----GT----------GG--------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47126 34 -    140813 ---------AAATA--CAATAAC-C----AT----------AG-GC-TCT-----AG----------GT-C----TG-ACCTG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427773 34 +  29670104 ---------AAACA--CAAGAAT-C----AC----------AA-GC-TTC-----AT----------GA-A----TG-ATCTG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8804 33 +     17804 ACCAGCA-GA-----------AT-C----CC----------CG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9309 33 -     12984 ACCAGCA-GA-----------AT-T----CC----------CG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17623 33 -     26561 ACCAGCA-GA-----------AT-C----CC----------CG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983104 27 +  93316391 --------AA-----------AAAC----AC----------AG-GC-TTC-----AC----------GG-A----TG-ACCTG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43501 32 +    145209 -----TG-AA-----------AT-C----AT----------AG-GC-TTC-----CT----------GG-AGAACCT-GCCTG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183163 20 +    200668 -----TA-G-A----------AT-C----AC----------AG-GA-TTC-----AT----------GG--------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 10
s Microtus_ochrogaster.CM001695.1                         15960895 34 +  27267610 ---------GAACA--CAAGAAC-C----AC----------AG-GC-TTC-----AT----------GG-T----TG-ACCTG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361268 11 -   8254450 -----------------------------------------AG-GA-ATC-----CT----------GG--------------
i Miniopterus_natalensis.LDJU01000034.1                  I 1 I 10
s Miniopterus_schreibersii.MinSch_scaffold_23309             40169 11 -     48117 -----------------------------------------AG-GA-TTC-----CT----------GG--------------
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 1 I 10
s Miopithecus_ogouensis.k141_1534655                         20553 33 -     27822 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7019 20 +     27589 -----AA-G-A----------AT-C----AT----------AG-GC-TTT-----GT----------GG--------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50894 26 -     62432 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177321 20 +    366855 -----CA-G----------G-AT-C----AC----------AG-GA-TTC-----GT----------GG--------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 10
s Mungos_mungo.MunMun_flattened_line_18455                   17025 20 -     63510 -----TA-C-A----------GT-A----AT----------AG-GC-TTT-----GT----------GC--------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37209 11 +     47283 -----------------------------------------AG-GA-TTT-----GT----------GG--------------
i Murina_feae.MurFea_scaffold_17764                      I 7 I 10
s Mus_caroli.FMAL02030609.1                                   5204 34 +      5579 ---------GACTA--CAAGAAC-C----AC----------CT-GC-GTC-----AT----------GG-A----TG-ACCTG
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685907 34 + 129401213 ---------GAATA--CAAGAAC-C----AC----------CT-GC-GTC-----AT----------GG-A----TG-CCCTG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58215822  8 +  89631738 ----------------------------------------------------------------------a----TG-GCTTG
i Mus_pahari.LT608297.1                                  I 22 C 0
s Mus_spretus.CM004101.1                                  39495225 36 + 130317789 ---------GAATATACAAGAAC-C----AC----------CT-GC-ATC-----AT----------GG-A----TG-CCCTG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81304 25 -     86153 ---------A-----------AT-T----AC----------AT-GT-TTC-----AT----------GG-A----TG-ACCAG
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 7 C 0
s Mustela_putorius.JH418006.1                             14353654 16 +  14710649 ---------------------AT-C----AT----------AG-GC-TTT-----GT----------GG--------------
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myotis_brandtii.KE162005.1                               9791250 20 +  10118263 -----CA-G-A----------AT-C----AC----------AG-GA-TTT-----GT----------GG--------------
i Myotis_brandtii.KE162005.1                             C 0 I 10
s Myotis_davidii.KB100139.1                                4385610 20 +   6019432 -----CA-G-A----------AC-C----AC----------AG-GA-TTT-----GT----------GG--------------
i Myotis_davidii.KB100139.1                              C 0 I 10
s Myotis_lucifugus.GL429869.1                               381432 20 +   4330536 -----CA-G-A----------AT-C----AC----------AG-GA-TTT-----GT----------GG--------------
i Myotis_lucifugus.GL429869.1                            C 0 I 10
s Myotis_myotis.MyoMyo_scaffold_66571                          259 20 +     18357 -----CA-G-A----------AC-C----AC----------AG-GA-TTT-----GT----------GG--------------
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 10
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118086 29 +    130748 -----TA-GA-----------AC-C----AC----------AG-GC-TTC-----CT----------GGAA----TG-ACCTG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              27206 33 +     34575 CACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCCG
i Nasalis_larvatus.k141_1350636                          I 69 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467611 20 -  31847680 -----AA-G-A----------AT-C----AT----------AG-GC-TTT-----GT----------GG--------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126129 20 -    149072 -----CA-G-A----------AT-C----AT----------AG-GA-TTC-----CT----------GG--------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 10
s Nomascus_annamensis.k141_1771965                           51943 33 -    132029 ACCAGCA-GA-----------AT-C----AC----------AG-AC-TTC-----AT----------GG-A----TG-ACCCG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8038 33 -     16345 ACCAGCA-GA-----------AT-C----AC----------AG-AC-TTC-----AT----------GG-A----TG-ACCTG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13923 33 +     22201 ACCAGCA-GA-----------AT-C----AC----------AG-AC-TTC-----AT----------GG-A----TG-ACCCG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412144 33 -  22158432 ACCAGCA-GA-----------AT-C----AC----------AG-AC-TTC-----AT----------GG-A----TG-ACCTG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24321 33 -     54323 ACCAGCA-GA-----------AT-C----AC----------AG-AC-TTC-----AT----------GG-A----TG-ACCTG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196757 20 +   9404916 -----CA-G-A----------AT-C----AT----------AT-GC-TTT-----GT----------GG--------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634797 26 + 196305487 --------GA-----------AA-A----TC----------AG-GC-TTC-----AT----------GG-A----TG-ACCGG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1555 26 -      3937 --------GA-----------AA-A----TC----------AG-GC-TTC-----AT----------GG-A----TG-ACCGG
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563036 26 - 199412804 --------GA-----------AA-A----TC----------AG-GC-TTC-----AT----------GG-A----TG-ACCGG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549727 18 -   3988456 -----AA-GC-----------AT-C----CT----------AG-GC-TTC------T----------G---------------
i Ochotona_princeps.JH802162.1                           C 0 I 6
s Octodon_degus.JH651603.1                                11045987 35 -  11899542 ---------A-----------AG-T----ACCAGA-TTCAGGA-GT-TTCA----AT----------TG-A----TG-ACCTT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450207 20 +   2017862 -----AA-G-A----------AT-C----AT----------AG-GC-TTT-----GT----------GG--------------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91254 34 -    140218 ---------AAACA--CAAGAAC-C----AC----------AG-GC-TTC-----AC----------GG-T----TG-ACCTG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1631 24 -     41509 ---------------------AC-C----AC----------AG-GC-TTC-----AT----------GG-C----TG-ACCTG
i Onychomys_torridus.OnyTor_scaffold_28377               I 3 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11902 29 -     14239 -----TA-GA-----------AT-C----AC----------AG-AC-TTC-----CT----------GG-A-A--CT-ACCTG
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102180 27 - 174332312 -----CA-GC-----------CT-C----AT----------AG-GC-TTC------C----------GG-A----AG-ACCTA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37795 20 +    559221 -----CA-G-A----------AT-C----AT----------AT-GC-TTC-----GT----------GG--------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38180 26 -     51505 --------GA-----------AA-G----TC----------AG-GC-TTC-----AT----------GG-A----TG-ACCAG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351183 26 +   1103335 --------GA-----------AA-G----TC----------AG-GC-TTC-----AT----------GG-G----TG-ACCAG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.KZ622849.1                                 31719 33 -    110857 ACCAACA-AA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Pan_troglodytes.KZ622849.1                             I 5 I 93
s Panthera_onca.PanOnc_flattened_line_3271                   22954 20 -    230217 -----CA-C-A----------AT-C----AT----------AG-GC-TTT-----GT----------GC--------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460280 20 -  18783137 -----CA-C-A----------AT-C----AT----------AG-GC-TTT-----GT----------GC--------------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971000 20 +   8748460 -----CA-C-A----------AT-C----AT----------AG-GC-TTT-----GT----------GC--------------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241367 33 - 183742232 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7831 33 +     21308 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288870 33 -  20919399 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20486 33 -     27687 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13622 33 +     16796 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20432 33 -     23640 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13593 20 +     78924 -----CA-G-A----------AT-C----AC----------GG-GC-TTT-----GT----------GC--------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24465 26 +     31479 --------GA-----------AA-T----TC----------AG-GC-TTC-----AT----------GG-A----TG-ACTGG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16824 26 -     24908 --------GA-----------AA-T----TC----------AG-GC-TTC-----AT----------GG-A----TG-ACTGG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_28053       38070 29 +     38305 ---------A-----------AC-C----AC----------AA-GC-TTTAGTGGAT----------GG-A----TG-ACCT-
i Perognathus_longimembris.PerPac_flattened_line_28053   I 8 N 0
s Peromyscus_maniculatus.KI615324.1                         245347 34 +  18517816 ---------AAACA--CAAGAAC-C----AC----------AG-GC-TTC-----AT----------GA-A----TG-ATCTG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30444 35 -     56120 ---------T-----------AC-T----ATCAGAATCAT-GA-GT-TTTA----GT----------GG-A----TA-ATCTG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             650 33 +     55023 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          201 33 -     89929 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             789 33 +     40849 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252456 33 +  14605196 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTT-----AT----------GG-A----TG-ACCTG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1378 20 +     22231 -----CA-G-A----------AT-C----AC----------AG-GA-TCT-----GT----------GG--------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 10
s Pithecia_albicans.k141_1239476                             63405 33 +    207309 GCCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4499 33 -     25401 GGCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30240 33 +     58159 GCCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30516 33 +     63561 GCCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30279 33 +     51148 GCCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555246 33 -   4542175 GGCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30263 33 +     51125 GCCAGCA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6668 33 +     39866 ACCAGCA-GA-----------AT-C----AC----------AG-CC-TTC-----AT----------GG-A----TG-ACCTG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1753 33 -      9282 ACCAGCA-GA-----------AT-C----AC----------AG-CC-TTC-----AT----------GG-A----TG-ACCTG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41157 33 -     87950 ACCAGCA-GA-----------AT-C----AC----------AG-CC-TTC-----AT----------GG-A----TG-ACCTG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41550 33 -     88961 ACCAGCA-GA-----------AT-C----AC----------AG-CC-TTC-----AT----------GG-A----TG-ACCTG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6249 33 -     39403 ACCAGCA-GA-----------AT-C----AC----------AG-CC-TTC-----AT----------GG-A----TG-ACCTG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41201 33 +     87928 ACCAGCA-GA-----------AT-C----AC----------AG-CC-TTC-----AT----------GG-A----TG-ACCTG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6246 33 -     60166 ACCAGCA-GA-----------AT-C----AC----------AG-CC-TTC-----AT----------GG-A----TG-ACCTG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13182 33 -     67232 ACCAGCA-GA-----------AT-C----AC----------AA-CC-TTC-----AT----------GG-A----TG-ACCTG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41098 33 -     90634 ACCAGCA-GA-----------AT-C----AC----------AG-CC-TTC-----AT----------GG-A----TG-ACCTG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42566 33 +     89403 ACCAGCA-GA-----------AT-C----AC----------AG-CC-TTC-----AT----------GG-A----TG-ACCTG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176164 33 - 189387572 ACCAACA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      190982 33 -   9816681 ACCAACA-GA-----------AT-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25786 33 +     69807 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              42981 33 -     80239 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8678 28 +     14086 -----TA-GA-----------GT-C----AC----------AG-GC-TTT-----CT----------GG-C----CA-ACCTT
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981118 26 +   4620579 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------AG-A----TG-ACCTG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564585 26 -   2598838 --------AA-----------AA-C----CC----------AG-TC-TTC-----AT----------GG-A----TG-ACCTG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2221 26 -      7103 --------AA-----------AA-C----CC----------AG-TC-TTC-----AT----------GG-A----TG-ACCTG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2818 26 -     11706 --------AA-----------AA-C----CC----------AG-TG-TTC-----AT----------GG-A----TG-ACCTG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6554 26 -     30655 --------AA-----------AA-C----CC----------AG-TC-TTC-----AT----------GG-A----TG-ACCTG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32879 26 +     46564 --------AA-----------AA-C----CC----------AG-TC-TTC-----AT----------GG-A----TG-ACCTG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93150 26 -     98465 --------AA-----------AA-C----CC----------AG-TC-TTC-----AT----------GG-A----TG-ACCTG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6787 26 +     35169 --------AA-----------AA-C----CC----------AG-TC-TTC-----AT----------GG-A----TG-ACCTG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34667 34 +     52041 ---------a--aataCAATAAC-C----AT----------AG-GC-TCT-----AG----------GT-C----TG-ACCTG
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50207 18 -     66298 --------G-A----------AC-C----AC----------AG-GA-TTC-----GT----------GG--------------
i Pteronotus_parnellii.KE847780.1                        I 2 I 10
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3219 16 -     18639 ---------------------AT-C----AT----------AG-GC-TTT-----GT----------GG--------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 1 C 0
s Pteropus_alecto.KB030862.1                               5839379 20 -  28871421 -----CA-G-A----------AT-C----AA----------AA-GC-TTT-----GT----------GG--------------
i Pteropus_alecto.KB030862.1                             C 0 I 68
s Pteropus_vampyrus.KN525825.1                             3535946 20 -   4952924 -----CA-G-A----------AT-C----AA----------AA-GC-TTT-----GT----------GG--------------
i Pteropus_vampyrus.KN525825.1                           C 0 I 10
s Puma_concolor.QAVW01001104.1                            18097593 20 +  38429054 -----CA-C-A----------AT-C----AT----------AG-GC-TTT-----GT----------GC--------------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25161 33 +     91421 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151654 33 -   7812017 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6031 33 +     72585 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021118 34 -  90668790 ---------AAATA--CTAGAAG-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-GAGTG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913340 20 +   3329780 -----CA-G-A----------AT-C----AC----------AG-GC-TTC-----AT----------GG--------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 10
s Rhinopithecus_bieti.k119_221883                            26971 33 +     27361 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120338 33 + 195417433 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234579 33 -   7961872 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73359 20 -    116970 -----CA-G-A----------AT-C----AA----------AA-GC-TTT-----GT----------GG--------------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 10
s Saguinus_bicolor.k141_1429097                               2547 33 +     27962 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2442 33 +      6077 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2534 33 +      5971 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2476 33 +      5932 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AC----------GG-A----TG-ACCTG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               799 33 -      4390 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390231 33 - 209938924 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2424 33 +      5979 ACCAGCG-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3165 33 -      4301 ACCAGCA-GA-----------AT-C----CC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236828 33 +   5703754 ACCAGCA-GA-----------AT-C----CA----------GG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6418 33 +     21866 ACCAGCA-GA-----------AT-C----CA----------GG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114531 30 +    313613 -----CA-G-A----------AT-C----AT----------AG-GC-TTT-----GTGGGTGACCTAGG--------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23478 33 +     27374 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      26997 33 +     58920 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13493 33 -     45317 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21151 33 -     42441 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23831 33 -     29113 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26900 33 -     48123 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47196 34 +     77746 ---------AAACA--CAAGAAC-C----AC----------AA-GC-TTT-----AT----------GG-A----TG-ACCTG
i Sigmodon_hispidus.SigHis_scaffold_20193                I 36 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856866 19 -   1910179 -----CA-G------------AT-C----AC----------AG-GC-TTT-----GC----------GG--------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866844 25 +   3870691 ---------A-----------AT-C----AC----------AG-GT-TTT-----AT----------GA-A----TG-ATCTG
i Spermophilus_dauricus.KZ294078.1                       I 9 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5000 20 -     97271 -----AA-G-A----------AT-C----AT----------AG-AC-TTT-----GT----------GG--------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123432 20 +    196729 -----CA-C-A----------AT-A----AT----------AG-GC-TTT-----GT----------GC--------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389417 30 +   1523678 ACCAGCA-GA-----------AT-C----AC----------AG-AC-TTC-----AT----------GG-A----TG-AC---
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12184 20 +     22964 -----CA-G-A----------AT-C----AC----------AG-GA-ATT-----GT----------GG--------------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 10
s Tamandua_tetradactyla.TamTet_scaffold_224794                1207 29 +      5583 -----TA-GA-----------AC-C----AC----------AG-GC-TTC-----CT----------GGAA----TG-ACCTG
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190119 20 +    199430 -----CA-G-A----------AT-C----AC----------AG-GC-TTC-----AT----------GG--------------
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104070 20 -    539355 -----CA-G-A----------AT-C----AC----------AG-GC-TTC-----AG----------GG--------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5414 33 +      6850 ACTACTA-GA-----------AT-C----AC----------AG-GC-TTC-----AC----------AG-A----TG-ACCTG
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5462 33 +     20590 ACTACTA-GA-----------AT-C----AC----------AG-GT-TTC-----AC----------AG-A----TG-ACCTG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351353 33 - 186847797 AACAGCA-AA-----------AT-C----AC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22771 35 -     33621 ---------A-----------AT-T----ACCAGAATCAT-GG-GT-TTTA----GT----------GG-A----TA-ACCTG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18346 28 -     31044 -----TG-GA-----------AT-C----AC----------AG-GT-TTC-----CT----------GG-A----GG-ACCTG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478227 20 -    610378 -----CA-G-A----------GT-C----AC----------AG-GA-TTC-----AT----------GG--------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 10
s Trachypithecus_auratus.k141_1189070                        19042 33 +     26378 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31706 33 -     78344 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18363 33 +     25722 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26657 33 -     62838 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26705 33 +     46913 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7511 33 -     28527 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28596 33 -     64340 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26633 33 -     63452 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8076 33 +     22490 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1504 33 -      6147 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TA-ACCTG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8409 33 -     13050 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253648 33 -   6242583 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59399 33 +     59866 AACAGCA-AA-----------AT-C----CC----------AG-GC-TTC-----GT----------GG-A----TG-ACCTG
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     731 30 -     21056 -----CG-G-A----------AA-C----AT----------AA-GC-TTT-----GTGTGTGATCTGGG--------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180367 20 +   5085361 -----CA-G-A----------AT-C----AT----------AG-GC-TTT-----GT----------GG--------------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23763 26 -     30710 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22670 26 -    147434 --------AA-----------AA-C----AC----------AG-GC-TTC-----AT----------GG-A----TG-ACCTG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103517 20 -    112863 -----CA-G-A----------AT-C----AT----------AT-GC-TTT-----GT----------GG--------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172622 25 -    224448 ---------A-----------AT-C----AC----------AG-GT-TTT-----AT----------GG-A----TT-ATTTG
i Xerus_inauris.XerIna_scaffold_2302                     I 9 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27405 20 -     86975 -----AA-G-A----------AT-C----AT----------AG-GC-TTT-----GT----------GG--------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1871 23 +      2695 ---------A-----------AA-C----AA----------AG-A--TTC-----AT----------GG-A----AG--TCTG
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 9 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508  0 -   4065304 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3714  7 +     36723 GG---A--------------------TTTT
s Acinonyx_jubatus.LLWD01001279.1                           811353 15 +   1699592 -----ATGA------A---C-TGGGATTGC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18588  7 +     63021 GA---G--------------------TTTT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413881 15 +  29979442 -----ATGACCTGGGA----------TTTC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            213991 15 +    347723 -----ATGACCTGGGA----------TTTC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16513  7 -     61208 TC---A--------------------TTTT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46040  7 +     53615 GG---A--------------------TTTT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41984  7 +     44087 GG---A--------------------TTTT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14622  7 -     21945 GG---A--------------------TTTT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16294  7 +     32033 GG---A--------------------TTTT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70747  7 -     84148 GG---A--------------------TTTT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42980  7 -     78289 CG---A--------------------TTTT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42426  7 +     55831 GG---A--------------------TTTT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40867  7 -     64179 GG---A--------------------TTTT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22514  7 -     24835 GG---A--------------------TTTT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39497  7 +     45454 GG---A--------------------TTTT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45195  7 +     70886 GG---A--------------------TTTT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7320  7 +     30854 GG---A--------------------TTTT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31459  7 +     42133 GG---A--------------------TTTT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175219  5 -    412891 -----A--------------------TTTC
i Anoura_caudifer.AnoCau_scaffold_1412                   I 10 C 0
s Aotus_azarae.k141_118258                                   49261  7 -     65372 GG---A--------------------TTTT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43015  7 +     43593 GG---A--------------------TTTT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671028  7 +   5030052 GG---A--------------------TTTT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22670  7 -     23494 GG---A--------------------TTTT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7806  7 +      8415 GG---A--------------------TTTT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14550  7 -     32367 GA---A--------------------TTTC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3509  5 -     15198 -----A--------------------TTTC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 10 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273259  7 +  21539123 GG---A--------------------TTTT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9425  7 +     48076 GG---A--------------------TTTT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4562  7 -     28759 GG---A--------------------TTTT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32116  7 +     44353 GG---A--------------------TTTT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47486  7 -     71267 GG---A--------------------TTTT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21546  7 -     33135 GG---A--------------------TTTT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4727  7 +     11645 GG---A--------------------TTTC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4733  7 -     19611 GG---A--------------------TTTC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6451  7 +     28062 GG---A--------------------TTTT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41745  7 -     91139 GG---A--------------------TTTT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19271  7 +     95584 GG---A--------------------TTTT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19184  7 +    119600 GG---A--------------------TTTT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8730  7 +     18648 GG---A--------------------TTTT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8268  7 -     13885 GG---A--------------------TTTT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             336  7 -      8861 GG---A--------------------TTTT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452729  7 + 189096842 GG---A--------------------TTTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                252  7 +      8664 GG---A--------------------TTTT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42503907 15 +  60362399 -----ATGACC----A--A---GG-ATTTC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7543 15 -     23171 -----ATGACC----A--A---GG-ATTTC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220886 15 +   9314153 -----ATGACC----A--A---GG-ATTTC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614021 15 +  59632846 -----ATGACC----A--A---GG-ATTTC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105602 15 -  63665305 -----ATGACC----A--A---GG-ATTTC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268815  7 +    496798 AG---A--------------------TTGC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3801  5 +      5315 -----A--------------------TTTC
i Carollia_perspicillata.CarPer_scaffold_170178          I 10 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20190  7 -     39886 AA---A--------------------TTTC
i Castor_canadensis.CasCan_scaffold_39952                I 1 C 0
s Cavia_aperea.AVPZ01000300.1                              4994481  7 +  23392119 GA---A--------------------TTTC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997923  7 +  23407841 GA---A--------------------TTTC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61024  7 -     66877 GA---A--------------------TTTC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3649  7 -     12580 GG---A--------------------TTTT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41704  7 +     53515 GG---A--------------------TTTT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369642  7 -  26074798 GG---A--------------------TTTT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6531  7 -     34880 GG---A--------------------TTTT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65626  7 -     89041 GG---A--------------------TTTT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          738  7 -      5494 AG---A--------------------TTGT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490686 15 -  27778364 -----AT--C-----A---CCTGGGATTTC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17519 15 +     27315 -----AT--C-----A---CCTGGGATTTC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139219  7 -   4669795 GG---A--------------------TTTT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42959  7 +     47900 GG---A--------------------TTTT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42792  7 -     44860 GG---A--------------------TTTT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42775  7 -    148725 GG---A--------------------TTTT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10032  7 -     17524 GG---A--------------------TTTT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25754  7 -     34525 GG---A--------------------TTTT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30230  7 -     45857 GG---A--------------------TTTT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23723  7 +     70610 GG---A--------------------TTTT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20648  7 +     36323 GG---A--------------------TTTT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11340  7 -     19938 AG---A--------------------TTTA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29158  7 -     33796 GG---A--------------------TTTC
i Cheirogaleus_major.k141_666340                         I 5 C 0
s Cheirogaleus_medius.k141_759766                             3674  7 -     15404 GG---A--------------------TTTC
i Cheirogaleus_medius.k141_759766                        I 5 C 0
s Cheracebus_lucifer.k141_2312002                             7532  7 -     32913 GG---A--------------------TTTT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17945  7 -     40346 GG---A--------------------TTTT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18200  7 +    216457 GG---A--------------------TTTT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           17993  7 +     39636 GG---A--------------------TTTT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2582  7 +      5346 GG---A--------------------TTTT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41080  7 -    112038 GG---A--------------------TTTT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6652  7 +     34062 GG---A--------------------TTTT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341545  7 +  18827391 GG---A--------------------TTTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8090  7 -     44032 GG---A--------------------TTTT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302870  7 - 135778131 GG---A--------------------TTTT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10395  7 +     15858 TG---G--------------------TGTA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601971  7 -    839153 TG---G--------------------TGTA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407311  7 -   2368649 GG---A--------------------TTTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377189  7 - 200372422 GG---A--------------------TTTT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                736  7 -     84244 GG---A--------------------TTTT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805770  4 +  53390261 -----G--------------------TTT-
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1279  5 -      8242 -----A--------------------TTTC
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 10 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40784  7 -     83289 GA---G--------------------TTTC
i Cricetomys_gambianus.CriGam_scaffold_14425             I 6 C 0
s Cricetulus_griseus.LT883664.1                          213113256  7 - 224834208 GA---A--------------------TTTC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2806 15 +     87169 -----GTGA------A---C-TGGGATTGC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643280  7 -   1526836 GA---G--------------------TTTC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3502  7 +     50838 GA---A--------------------TTTC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2371  7 +     36344 GA---A--------------------TTTC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108682  7 -   2246927 GG---A--------------------TTTC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291098  7 +  12879189 GG---A--------------------TTTC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863251  5 -  20541912 -----A--------------------CTTC
i Desmodus_rotundus.KZ672289.1                           I 10 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662978 15 -   1390856 -----AT--C-----A---CCTGGGCTTTC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137763 15 -    198055 -----AT--C-----A---CCTGGGATTTC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96991  7 -    115145 GA---G--------------------TTTC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948840  6 -  37912305 GG---G--------------------C-AC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3787  6 -     10735 GG---G--------------------C-AC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8435  7 +     14636 GA---A--------------------TTTC
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852443  7 - 111700974 GG---A--------------------GTTC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4817  5 +     19438 -----A--------------------TATC
i Eidolon_helvum.AWHC01266696.1                          I 10 C 0
s Elephantulus_edwardii.JH947257.1                         9105985  7 -  10337057 AG---A--------------------TGTC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29518  7 +    110024 GA---A--------------------TTTC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11492  7 +     18970 AA---A--------------------TTTC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914634 15 +  41312741 -----ATGACCTGGGA----------TTTC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576883  5 +  14770903 -----A--------------------TATC
i Eptesicus_fuscus.JH977646.1                            I 10 C 0
s Equus_asinus.JREZ01000139.1                              3039969 25 -   4378816 -----ATGACCTGGGATGACCTGGGATTTC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373903 15 +  39960074 -----ATGACCTGGGA----------TTTC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410689 15 -    498745 -----ATGACCTGGGA----------TTTC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               261068  7 +  21539334 GG---A--------------------TTTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13270  7 -     24895 GC---A--------------------TTTC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40979  7 -     70999 GC---A--------------------TTTC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84941  7 +    112731 GC---A--------------------TTTC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41514  7 +     68309 GC---A--------------------TTTC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51836  7 -     65740 GC---A--------------------TTTC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22469  7 -     75513 GC---A--------------------TTTC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46662  7 -     97555 GC---A--------------------TTTC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3388  7 +     30972 GC---A--------------------TTTC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41109  7 -     52037 GC---A--------------------TTTC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57513  7 -    111500 GC---A--------------------TTTC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245265 15 - 206538554 -----ATGA------A---C-TGGGATTGC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115051 15 - 205367284 -----ATGA------A---C-TGGGATTGC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26153 15 -     30238 -----ATGA------A---C-TGGGATTGC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123053 10 -    137831 GGATTA--------------------TTTC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6598 10 +     22493 GAATTA--------------------TTTC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18650 10 -     32986 GGATTA--------------------TTTC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17587  7 +     18121 CG---A--------------------TTTT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32715  7 -     36801 GA---A--------------------TTTC
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4053  7 -      8343 GG---A--------------------TTTT
i Gorilla_beringei.k141_3358147                          I 33 C 0
s Gorilla_gorilla.LT578341.1                                253064  7 - 186649187 GG---A--------------------TTTT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     211  7 -     78134 AA---A--------------------TTTC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13197  7 -     40692 GC---A--------------------TTTC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34598  7 +     49394 GC---A--------------------TTTC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59467  7 -     66874 GC---A--------------------TTTC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8340  7 -     42923 GC---A--------------------TTTC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15340  7 -     53142 GC---A--------------------TTTC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29292 15 -    327341 -----ATGA------A---C-TGGGATTGC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925558  7 -  22651954 GA---A--------------------TTTC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11536  7 +     12639 GG---A--------------------GTTC
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 I 7
s Hipposideros_galeritus.HipGal_scaffold_23202               49354  5 +     49977 -----A--------------------TTTC
i Hipposideros_galeritus.HipGal_scaffold_23202           I 10 C 0
s Hoolock_leuconedys.ctg274                                    141053  7 -    630532 AG---A--------------------TTTT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  67985 15 +     83186 -----ATGA------A---C-TGGGATTGC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69870  7 +    143317 GA---A--------------------TTTC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4087  7 +     12352 GG---A--------------------TTTT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11270  7 +     55766 GG---A--------------------TTTT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050866  7 + 191637585 GG---A--------------------TTTT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799744  7 +  11177569 GG---A--------------------TTTT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385287  7 +   7955117 AA---G--------------------GTTC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     850  7 +     11955 GG---A--------------------TTTC
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237701  7 +   9596543 AC---A--------------------TTTT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41801  7 +    110728 GG---A--------------------TTTT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60348  5 -     65777 -----A--------------------TATC
i Lasiurus_borealis.LasBor_scaffold_16567                I 10 C 0
s Lemur_catta.scaffold_24                                 14757989  7 +  30322482 GC---A--------------------TTTC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2718  7 -     13097 GG---A--------------------TTTT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2473  7 +      5940 GG---A--------------------TTTT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2303  7 -      5717 GG---A--------------------TTTT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8667  6 -     11567 GG---A--------------------TTT-
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10048  6 -     12945 GG---A--------------------TTT-
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7519  7 +     29618 AG---A--------------------TTTT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7516  7 +     31569 AG---A--------------------TTTT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7527  7 +     24756 AG---A--------------------TTTC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7525  7 +     16388 AG---A--------------------TTTT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812028 15 -   3914936 -----ATGACCTGGGA----------TTTC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16373  7 +     24238 GG---A--------------------CTCC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331172  7 -   1826925 AG---A--------------------TTTT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8811 10 +     19643 GGATTA--------------------TTTC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042472 10 -   6120653 GGATTA--------------------TTTC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078958  7 +  43346337 GG---A--------------------TTTC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613176 15 +  59628241 -----ATGACC----A--A---GG-ATTTC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43489  7 -     61512 GG---A--------------------TTTT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371150  7 -  60120075 GG---A--------------------TTTT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23405  7 +     30207 GG---A--------------------TTTT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20508  7 -     24934 GG---A--------------------TTTT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23357  7 +     30527 GG---A--------------------TTTT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34546  7 -     50087 GG---A--------------------TTTT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44317  7 +     51645 GG---A--------------------TTTT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413486  7 - 187317192 GG---A--------------------TTTT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397709  7 +  25927173 GG---A--------------------TTTT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46873  7 -     62418 GG---A--------------------TTTT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23528  7 +     24253 GG---A--------------------TTTT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43348  7 +     59329 GG---A--------------------TTTT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269276  7 +    668171 GG---A--------------------TTTT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20463  7 +     21031 GG---A--------------------TTTT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 1060  7 +     17132 GG---A--------------------TTTT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221780  5 -    270270 -----A--------------------TATC
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 10 C 0
s Mandrillus_leucophaeus.scaffold280                        320560  7 +  24302211 GG---A--------------------TTTT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355392  7 -    752769 GG---A--------------------TTTT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672058 15 -    737560 -----AT--C-----AT--C-TGAGATTTC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219345 15 +    317179 -----ATGACCTG--A-GA-------TTTC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499511  7 +  40650429 AA---G--------------------GTTC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148964  5 +    207569 -----A--------------------TTTC
i Megaderma_lyra.MegLyr_scaffold_4542                    I 10 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24521 15 -     74585 -----ATGACCTGGGA----------TTTC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47160  7 -    140813 AA---G--------------------TTTC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427807  7 +  29670104 GA---A--------------------TTTC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8837  7 +     17804 GG---A--------------------TTTT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9342  7 -     12984 GG---A--------------------TTTT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17656  7 -     26561 GG---A--------------------TTTT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983131  7 +  93316391 GG---A--------------------TTTC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43533  7 +    145209 GG---A--------------------GTTC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183193  5 +    200668 -----A--------------------TTTC
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 10 C 0
s Microtus_ochrogaster.CM001695.1                         15960929  7 +  27267610 GA---A--------------------TTTC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361289  5 -   8254450 -----A--------------------TTTC
i Miniopterus_natalensis.LDJU01000034.1                  I 10 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40190  5 -     48117 -----A--------------------TTTC
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 10 C 0
s Miopithecus_ogouensis.k141_1534655                         20586  7 -     27822 GG---A--------------------TTTT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7039 15 +     27589 -----ATGACCTGGGA----------TTTC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50920  7 -     62432 GG---A--------------------TTTC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177351  5 +    366855 -----G--------------------TTTC
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 10 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17045 15 -     63510 -----ATGA------A---C-TGGGATTGC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37230  5 +     47283 -----A--------------------TATC
i Murina_feae.MurFea_scaffold_17764                      I 10 C 0
s Mus_caroli.FMAL02030609.1                                   5238  7 +      5579 GA---G--------------------TTTC
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685941  7 + 129401213 GA---G--------------------TTTC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58215830  7 +  89631738 GA---G--------------------TTTC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495261  7 + 130317789 GA---G--------------------TTTC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81329  7 -     86153 GA---A--------------------TCTT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353670 15 +  14710649 -----ATGACCTGGGA----------TTTC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791280  5 +  10118263 -----A--------------------TATC
i Myotis_brandtii.KE162005.1                             I 10 C 0
s Myotis_davidii.KB100139.1                                4385640  5 +   6019432 -----A--------------------TATC
i Myotis_davidii.KB100139.1                              I 10 C 0
s Myotis_lucifugus.GL429869.1                               381462  5 +   4330536 -----A--------------------TATC
i Myotis_lucifugus.GL429869.1                            I 10 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          289  5 +     18357 -----A--------------------TATC
i Myotis_myotis.MyoMyo_scaffold_66571                    I 10 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118115  7 +    130748 GG---G--------------------TGTA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              27239  7 +     34575 GG---A--------------------TTTT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467631 15 -  31847680 -----ATGACCTGGGA----------TTTC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126159  5 -    149072 -----A--------------------TTTC
i Noctilio_leporinus.NocLep_scaffold_7894                I 10 C 0
s Nomascus_annamensis.k141_1771965                           51976  7 -    132029 GG---A--------------------TTTT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8071  7 -     16345 GG---A--------------------TTTT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13956  7 +     22201 GG---A--------------------TTTT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412177  7 -  22158432 AG---A--------------------TTTT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24354  7 -     54323 GG---A--------------------TTTT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196777 15 +   9404916 -----ATGACC----A--A---GG-ATTTC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634823 10 + 196305487 GGATTA--------------------TTTC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1581 10 -      3937 GGATTA--------------------TTTC
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563062 10 - 199412804 GGATTA--------------------TTTC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549751  7 -   3988456 GG---A--------------------CTTT
i Ochotona_princeps.JH802162.1                           I 6 C 0
s Octodon_degus.JH651603.1                                11046022  7 -  11899542 GA---A--------------------TTTC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450227 15 +   2017862 -----ATGACCTGGGA----------TTTC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91288  7 -    140218 GA---A--------------------TTTC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1655  7 -     41509 TA---G--------------------TTTC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11931  7 -     14239 GG---A--------------------TTTC
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102207  7 - 174332312 GG---A--------------------CTTC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37815 15 +    559221 -----ATGACC----A--A---GG-ATTTC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38206 10 -     51505 GGATTA--------------------TTTC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351209 10 +   1103335 GGATTA--------------------TTTC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1471069  7 - 189151597 GG---A--------------------TTTT
i Pan_troglodytes.CM009242.2                             I 33 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   22974 15 -    230217 -----ATGA------A---C-TGGGATTGC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460300 15 -  18783137 -----ATGA------A---C-TGGGATTGC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971020 15 +   8748460 -----ATGA------A---C-TGGGATTGC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241400  7 - 183742232 GG---A--------------------TTTT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7864  7 +     21308 GG---A--------------------TTTT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288903  7 -  20919399 GG---A--------------------TTTT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20519  7 -     27687 GG---A--------------------TTTT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13655  7 +     16796 GG---A--------------------TTTT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20465  7 -     23640 GG---A--------------------TTTT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13613 15 +     78924 -----ATGA------A---C-TGGGATTGC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24491 10 +     31479 GGATTA--------------------TTTC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16850 10 -     24908 GGATTA--------------------TTTC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         205  6 +      9367 GC---A--------------------T-TC
i Perognathus_longimembris.PerPac_flattened_line_89005   N 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245381  7 +  18517816 GA---G--------------------TTTC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30479  7 -     56120 GA---A--------------------TTTC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             683  7 +     55023 GG---A--------------------TTTT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          234  7 -     89929 GG---A--------------------TTTT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             822  7 +     40849 GG---A--------------------TTTT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252489  7 +  14605196 GG---A--------------------TTTT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1408  5 +     22231 -----A--------------------TATC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 10 C 0
s Pithecia_albicans.k141_1239476                             63438  7 +    207309 GG---A--------------------TTTT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4532  7 -     25401 GG---A--------------------TTTT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30273  7 +     58159 GG---A--------------------TTTT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30549  7 +     63561 GG---A--------------------TTTT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30312  7 +     51148 GG---A--------------------TTTT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555279  7 -   4542175 GG---A--------------------TTTT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30296  7 +     51125 GG---A--------------------TTTT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6701  7 +     39866 GG---A--------------------TTTT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1786  7 -      9282 GG---A--------------------TTTT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41190  7 -     87950 GG---A--------------------TTTT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41583  7 -     88961 GG---A--------------------TTTT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6282  7 -     39403 GG---A--------------------TTTT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41234  7 +     87928 GG---A--------------------TTTT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6279  7 -     60166 GG---A--------------------TTTT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13215  7 -     67232 GG---A--------------------TTTT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41131  7 -     90634 GG---A--------------------TTCT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42599  7 +     89403 GG---A--------------------TTTT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176197  7 - 189387572 GG---A--------------------TTTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191015  7 -   9816681 GG---A--------------------TTTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25819  7 +     69807 GG---A--------------------TTTT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43014  7 -     80239 GG---A--------------------TTTT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8706  7 +     14086 GG---A--------------------GTTC
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 I 7
s Prolemur_simus.MPIZ01000396.1                            1981144  7 +   4620579 GC---A--------------------TTTC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564611  7 -   2598838 GG---A--------------------TTTC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2247  7 -      7103 GG---A--------------------TTTC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2844  7 -     11706 GG---A--------------------TTTC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6580  7 -     30655 GG---A--------------------TTTC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32905  7 +     46564 GG---A--------------------TTTC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93176  7 -     98465 GG---A--------------------TTTC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6813  7 +     35169 GG---A--------------------TTTC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34701  7 +     52041 AA---G--------------------TTTC
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50235  5 -     66298 -----A--------------------TTTC
i Pteronotus_parnellii.KE847780.1                        I 10 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3235 15 -     18639 -----AT--C-----A---CCTGGGATTTC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839467  5 -  28871421 -----A--------------------TATC
i Pteropus_alecto.KB030862.1                             I 68 C 0
s Pteropus_vampyrus.KN525825.1                             3535976  5 -   4952924 -----A--------------------TATC
i Pteropus_vampyrus.KN525825.1                           I 10 C 0
s Puma_concolor.QAVW01001104.1                            18097613 15 +  38429054 -----ATGA------A---C-TGGGATTGC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25194  7 +     91421 GG---A--------------------TTTT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151687  7 -   7812017 GG---A--------------------TTTT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6064  7 +     72585 GG---A--------------------TTTT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021152  7 -  90668790 GA---G--------------------TTTC
i Rattus_norvegicus.chr16                                C 0 I 35
s Rhinolophus_sinicus.LVEH01000134.1                       2913370  5 +   3329780 -----A--------------------TTTC
i Rhinolophus_sinicus.LVEH01000134.1                     I 10 C 0
s Rhinopithecus_bieti.k119_221883                            27004  7 +     27361 GG---A--------------------TTTT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120371  7 + 195417433 GG---A--------------------TTTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234612  7 -   7961872 GG---A--------------------TTTT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73389  5 -    116970 -----A--------------------TATC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 10 C 0
s Saguinus_bicolor.k141_1429097                               2580  7 +     27962 GG---A--------------------TTTT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2475  7 +      6077 GG---A--------------------TTTT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2567  7 +      5971 GG---A--------------------TTTT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2509  7 +      5932 GG---A--------------------TTTT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               832  7 -      4390 GG---A--------------------TTTT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390264  7 - 209938924 GG---A--------------------TTTT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2457  7 +      5979 GG---A--------------------TTTT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3198  7 -      4301 GG---A--------------------TTTT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236861  7 +   5703754 GG---A--------------------TTTT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6451  7 +     21866 GG---A--------------------TTTT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114561  5 +    313613 -----A--------------------TTTC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23511  7 +     27374 GG---A--------------------TTTT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27030  7 +     58920 GG---A--------------------TTTT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13526  7 -     45317 GG---A--------------------TTTT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21184  7 -     42441 GG---A--------------------TTTT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23864  7 -     29113 GG---A--------------------TTTT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26933  7 -     48123 GG---A--------------------TTTT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47230  7 +     77746 GA---A--------------------TTTC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856885  5 -   1910179 -----A--------------------TTTC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866869  7 +   3870691 AA---G--------------------GTTC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5020 15 -     97271 -----ATGACCTGGGA----------TTTC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123452 15 +    196729 -----ATGA------A---C-TGGGATTGC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12214  5 +     22964 -----C--------------------TTTC
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 10 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1236  7 +      5583 GG---G--------------------TGTA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190139 14 +    199430 -----ATGACCTGG-A----------TTTC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104090 14 -    539355 -----ATGACCTGG-A----------TTTC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5447  7 +      6850 AG---A--------------------TTGC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5495  7 +     20590 AG---A--------------------TTGC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351386  7 - 186847797 GG---A--------------------TTTT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22806  7 -     33621 GA---A--------------------TTTC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18374  7 -     31044 GG---A--------------------TTTA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478257  5 -    610378 -----A--------------------TTTC
i Tonatia_saurophila.TonSau_scaffold_294                 I 10 C 0
s Trachypithecus_auratus.k141_1189070                        19075  7 +     26378 GG---A--------------------TTTT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31739  7 -     78344 GG---G--------------------TTTT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18396  7 +     25722 GG---A--------------------TTTT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26690  7 -     62838 GG---A--------------------TTTT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26738  7 +     46913 GG---A--------------------TTTT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7544  7 -     28527 GG---A--------------------TTTT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28629  7 -     64340 GG---A--------------------TTTT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26666  7 -     63452 GG---A--------------------TTTT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8109  7 +     22490 GG---A--------------------TTTT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1537  7 -      6147 GG---A--------------------TTTT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8442  7 -     13050 GG---A--------------------TTTT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253681  7 -   6242583 GG---A--------------------TTTT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59432  7 +     59866 GG---A--------------------TTTT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     761  5 -     21056 -----A--------------------TTTT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180387 15 +   5085361 -----ATGAC-T----TG----GG-ATTTC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23789  7 -     30710 GG---A--------------------TTTC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22696  7 -    147434 GG---A--------------------TTTC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103537 15 -    112863 -----ATGACC----A--A---GG-ATTTC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172647  7 -    224448 AA---G--------------------GTTT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27425 15 -     86975 -----ATGACCTGGGA----------TTTC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1894  7 +      2695 GT---A--------------------TTTT
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508  0 -   4065304 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Symphalangus_syndactylus.tarseq_199                       389447  0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3721 7 +     36723 CC----TGC--AT
s Acinonyx_jubatus.LLWD01001279.1                           811368 7 +   1699592 CC----TAC--GT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18595 7 +     63021 TC----TGT--AC
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413896 7 +  29979442 CT----TAT--GT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214006 7 +    347723 CC----TAT--GT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16520 7 -     61208 CC----TAT--GT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46047 7 +     53615 CC----TGC--AT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41991 7 +     44087 CC----TGC--AT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14629 7 -     21945 CC----TGC--AT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16301 7 +     32033 CC----TGC--AT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70754 7 -     84148 CC----TGC--AT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42987 7 -     78289 CC----TGC--AT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42433 7 +     55831 CC----TGC--AT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40874 7 -     64179 CC----TGC--AT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22521 7 -     24835 CC----TGG--AT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39504 7 +     45454 CC----TGG--AT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45202 7 +     70886 CC----TGC--AT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7327 7 +     30854 CC----TGC--AT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31466 7 +     42133 CC----TGC--AT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175224 7 -    412891 CC----TAT--GT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49268 7 -     65372 CC----TGC--CT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43022 7 +     43593 CC----TGC--CT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671035 7 +   5030052 CC----TGC--CT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22677 7 -     23494 CC----TGC--CT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7813 7 +      8415 CC----TGC--CT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14557 7 -     32367 CC----TGT--GT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3514 7 -     15198 CC----TAT--GA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273266 7 +  21539123 CC----TGC--TT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9432 7 +     48076 CC----TGC--AT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4569 7 -     28759 CC----TGC--TT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32123 7 +     44353 CC----TGC--TT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47493 7 -     71267 CC----TGC--AT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21553 7 -     33135 CC----TGC--TT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4734 7 +     11645 CT----TTT--GT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4740 7 -     19611 CT----TTT--GT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6458 7 +     28062 CC----TGC--GT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41752 7 -     91139 CC----TGC--GT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19278 7 +     95584 CC----TGC--GT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19191 7 +    119600 CC----TGC--GT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8737 7 +     18648 CC----TGC--CT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8275 7 -     13885 CC----TGC--CT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             343 7 -      8861 CC----TGC--CT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452736 7 + 189096842 CC----TGC--CT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                259 7 +      8664 CC----TGC--TT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42503922 7 +  60362399 CC----TAT--GT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7558 7 -     23171 CC----TAT--GT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220901 7 +   9314153 CC----TAT--GT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614036 7 +  59632846 CC----TAT--GT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105617 7 -  63665305 CC----TAT--GT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268822 7 +    496798 TT----TGT--GT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3806 7 +      5315 CC----TAC--GT
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20197 7 -     39886 CC----TAT--GT
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 200
s Cavia_aperea.AVPZ01000300.1                              4994488 6 +  23392119 CC----TGT--G-
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997930 6 +  23407841 CC----TGT--G-
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61031 6 -     66877 CC----TGT--G-
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3656 7 -     12580 CC----CGC--CT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41711 7 +     53515 CC----TGC--CT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369649 7 -  26074798 CC----TGC--CT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6538 7 -     34880 CC----TGC--CT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65633 7 -     89041 CC----TGC--CT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          745 7 -      5494 CT----TGT--GT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490701 7 -  27778364 CC----TGT--GT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17534 7 +     27315 CC----TGT--GT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139226 7 -   4669795 CC----TGC--AT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42966 7 +     47900 CC----TGC--AT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42799 7 -     44860 CC----TGC--AT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42782 7 -    148725 CC----TGC--AT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10039 7 -     17524 CC----TGC--AT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25761 7 -     34525 CC----TGC--AT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30237 7 -     45857 CC----TGC--AT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23730 7 +     70610 CC----TGC--AT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20655 7 +     36323 CC----TGC--AT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11347 7 -     19938 CT----TGT--GC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29165 7 -     33796 CT----TGT--GT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3681 7 -     15404 CT----TGT--GT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7539 7 -     32913 CC----CAC--AT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17952 7 -     40346 CC----CAC--AT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18207 7 +    216457 CC----CAC--AT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18000 7 +     39636 CC----CAC--AT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2589 7 +      5346 CC----TGC--CT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41087 7 -    112038 CC----TGC--GT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6659 7 +     34062 CC----TGC--GT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341552 7 +  18827391 CC----TGC--AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8097 7 -     44032 CC----TGC--AT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302877 7 - 135778131 CC----TGC--AT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10402 7 +     15858 CT----TGT--GC
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            601978 7 -    839153 CT----TGT--GC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407318 7 -   2368649 CC----TGC--AT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377196 7 - 200372422 CC----TGC--AT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                743 7 -     84244 CC----TGC--AT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805774 7 +  53390261 CT----TAT--GT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1284 7 -      8242 CC----TAT--GG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40791 7 -     83289 CC----TGT--GC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113263 7 - 224834208 CC----TGT--TC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2821 7 +     87169 CT----TAT--GT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643287 7 -   1526836 CT----TGT--GT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3509 6 +     50838 CC----TGT--G-
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2378 6 +     36344 CC----TGT--A-
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108689 7 -   2246927 CT----TGT--GC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291105 7 +  12879189 CT----TGT--GT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863256 7 -  20541912 CC----TAT--GT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  662993 7 -   1390856 CC----TGT--GT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137778 7 -    198055 CC----TGT--GT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    96998 6 -    115145 CT----TCT--G-
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948846 7 -  37912305 TT----TGT--AT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3793 7 -     10735 TT----TGT--AT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8442 6 +     14636 CC----TGT--G-
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852450 7 - 111700974 CCTGTCT------
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4822 7 +     19438 CC----TGT--GT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105992 3 -  10337057 CT----T------
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29525 7 +    110024 CT----GGT--TC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11499 7 +     18970 CT----TGT--CC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914649 7 +  41312741 CC----TAT--GT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576888 7 +  14770903 CC----TAT--GT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3039994 7 -   4378816 CC----TGT--GT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373918 7 +  39960074 CC----TGT--GT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410704 7 -    498745 CC----TGT--GT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               261075 7 +  21539334 CC----TGC--AT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13277 7 -     24895 CT----TGT--GT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40986 7 -     70999 CT----TGT--GT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84948 7 +    112731 CT----TGT--GT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41521 7 +     68309 CT----TGT--GT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51843 7 -     65740 CT----TGT--GT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22476 7 -     75513 CT----TGT--GT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46669 7 -     97555 CT----TGT--GT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3395 7 +     30972 CT----TGT--GT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41116 7 -     52037 CT----TGT--GT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57520 7 -    111500 CT----TGT--GT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245280 7 - 206538554 CC----TAT--GT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115066 7 - 205367284 CC----TAT--GT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26168 7 -     30238 CC----TAT--GT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123063 7 -    137831 CT----GGT--GT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6608 7 +     22493 CT----GGT--GT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18660 7 -     32986 CT----GGT--GT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17594 7 +     18121 CC----TAT--GT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 24
s Glis_glis.GliGli_scaffold_33859                            32722 7 -     36801 TC----TGT--GT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4060 7 -      8343 CC----TGC--AT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253071 7 - 186649187 CC----TGC--AT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     218 7 -     78134 TC----TGT--GT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13204 7 -     40692 CT----TGT--GT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34605 7 +     49394 CT----TGT--GT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59474 7 -     66874 CT----TGT--GT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8347 7 -     42923 CT----TGT--GT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15347 7 -     53142 CT----TGT--GT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29307 7 -    327341 CT----TAC--GT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925565 6 -  22651954 CC----T--GTG-
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_9610                 79535 7 -    129986 CC----CGT--GT
i Heterohyrax_brucei.HetBruBak_scaffold_9610             n 7 n 7
s Hipposideros_galeritus.HipGal_scaffold_23202               49359 7 +     49977 CC----TAG--GT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141060 7 -    630532 CC----TGC--AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68000 7 +     83186 CT----TAC--AT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69877 6 +    143317 CC----TGT--G-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4094 7 +     12352 CC----TGC--AT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11277 7 +     55766 CC----TGC--AT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050873 7 + 191637585 CC----TGC--AT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799751 7 +  11177569 CC----TGC--AT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385294 7 +   7955117 CC----TGT--GC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     857 7 +     11955 CT----TGT--AT
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237708 7 +   9596543 CC----CAg--at
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41808 7 +    110728 CC----TGC--AT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60353 7 -     65777 CC----TAT--GT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14757996 7 +  30322482 CT----TGT--GT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2725 7 -     13097 CC----TGC--CT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2480 7 +      5940 CC----TGC--CT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2310 7 -      5717 CC----TGC--CT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8673 7 -     11567 CC----TGC--CT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10054 7 -     12945 CC----TGC--CT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7526 7 +     29618 CT----TGT--GT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7523 7 +     31569 CT----TGT--GT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7534 7 +     24756 CT----TGT--GT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7532 7 +     16388 CT----TGT--GT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812043 7 -   3914936 TC----TAT--GT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16380 7 +     24238 TC----TGT--GA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331179 7 -   1826925 CC----TGC--AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8821 7 +     19643 CT----GGT--GT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042482 7 -   6120653 CT----GGT--GT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078965 7 +  43346337 CC----TGA--GT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613191 7 +  59628241 CT----TAT--GT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43496 7 -     61512 CC----TGC--AT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371157 7 -  60120075 CC----TGC--AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23412 7 +     30207 CC----TGC--AT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20515 7 -     24934 CC----TGC--AT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23364 7 +     30527 CC----TGC--AT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34553 7 -     50087 CC----TGC--AT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44324 7 +     51645 CC----TGC--AT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413493 7 - 187317192 CC----TGC--AT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397716 7 +  25927173 CC----TGC--AT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46880 7 -     62418 CC----TGC--AT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23535 7 +     24253 CC----TGC--AT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43355 7 +     59329 CC----TGC--AT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269283 7 +    668171 CC----TGC--AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20470 7 +     21031 CC----TGC--AT
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 1067 7 +     17132 CC----TGC--AT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221785 7 -    270270 CC----TAT--GT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320567 7 +  24302211 CC----TGC--AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355399 7 -    752769 CC----TGC--AT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672073 7 -    737560 CC----TAT--GT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219360 7 +    317179 CC----TAT--GT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499518 7 +  40650429 CC----TGT--GC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148969 7 +    207569 CC----TGT--GT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24536 7 -     74585 CC----TAT--GT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47167 7 -    140813 TT----AGT--AC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427814 7 +  29670104 CT----TGT--TC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8844 7 +     17804 CC----TGC--CT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9349 7 -     12984 CC----TGC--CT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17663 7 -     26561 CC----TGC--CT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983138 7 +  93316391 CT----TGT--GT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43540 7 +    145209 CCTGTCT------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183198 7 +    200668 CC----GAT--GT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960936 7 +  27267610 CC----TGT--TC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361294 7 -   8254450 CC----TGT--GT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40195 7 -     48117 CC----TGT--GT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20593 7 -     27822 CC----TGC--AT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7054 7 +     27589 TC----TAT--GT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50927 7 -     62432 CT----TGT--GT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177356 7 +    366855 CC----TGT--GT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17060 7 -     63510 CT----TAC--GT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37235 7 +     47283 CC----TAT--GT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   5245 7 +      5579 TG----TGT--AC
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685948 7 + 129401213 TG----TGT--AC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58215837 7 +  89631738 CA----TGT--AC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495268 7 + 130317789 TG----TGT--AC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81336 7 -     86153 TC----TGT--GT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353685 7 +  14710649 CC----CAT--GT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791285 7 +  10118263 CC----TAT--GT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385645 7 +   6019432 AC----TAT--GC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381467 7 +   4330536 CC----TAT--GT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          294 7 +     18357 CC----TAT--GT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118122 7 +    130748 CC----TAT--GC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              27246 7 +     34575 CC----TGC--AT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467646 7 -  31847680 TC----TAT--GT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126164 7 -    149072 CT----TAT--GT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51983 7 -    132029 CC----TGC--AT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8078 7 -     16345 CC----TGC--AT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13963 7 +     22201 CC----TGC--AT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412184 7 -  22158432 CC----TGC--AT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24361 7 -     54323 CC----TGC--AT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196792 7 +   9404916 CC----TAT--GT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634833 7 + 196305487 CT----GGT--GT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1591 7 -      3937 CT----GGT--GT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563072 7 - 199412804 CT----GGT--GT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549758 7 -   3988456 CT----TGT--GA
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Octodon_degus.JH651603.1                                11046029 6 -  11899542 CC----TGT--G-
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450242 7 +   2017862 CC----TAT--GT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91295 7 -    140218 CC----TGT--TC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1662 7 -     41509 CC----TGT--AC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11938 3 -     14239 CC----T------
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102214 7 - 174332312 TC----TGT--GA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37830 7 +    559221 CC----TAT--GT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38216 7 -     51505 CT----GGT--GT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351219 7 +   1103335 CT----GGT--GT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1471076 7 - 189151597 CC----TGC--AT
i Pan_troglodytes.CM009242.2                             C 0 I 23
s Panthera_onca.PanOnc_flattened_line_3271                   22989 7 -    230217 CC----TAC--GT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460315 7 -  18783137 CC----TAC--GT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971035 7 +   8748460 CC----TAC--GT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241407 7 - 183742232 CC----CGC--AT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7871 7 +     21308 CC----CGC--AT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288910 7 -  20919399 CC----CGC--AT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20526 7 -     27687 CC----TGC--AT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13662 7 +     16796 CC----CGC--AT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20472 7 -     23640 CC----CGC--AT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13628 7 +     78924 CC----TAC--GT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24501 7 +     31479 CT----GGT--GT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16860 7 -     24908 CT----GGT--GT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         211 7 +      9367 TT----TGT--AT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245388 7 +  18517816 CT----TGT--ac
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30486 4 -     56120 TC----T----G-
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             690 7 +     55023 CC----TGC--AT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          241 7 -     89929 CC----TGC--AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             829 7 +     40849 CC----TGC--AT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252496 7 +  14605196 CC----TGC--AT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1413 7 +     22231 CC----TAT--GT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63445 7 +    207309 CC----TGC--AT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4539 7 -     25401 CC----TGC--AT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30280 7 +     58159 CC----TGC--AT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30556 7 +     63561 CC----TGC--AT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30319 7 +     51148 CC----TGC--AT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555286 7 -   4542175 CC----TGC--AT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30303 7 +     51125 CC----TGC--AT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6708 7 +     39866 CC----CAC--AT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1793 7 -      9282 CC----CAC--AT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41197 7 -     87950 CC----CAC--AT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41590 7 -     88961 CC----CAC--AT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6289 7 -     39403 CC----CAC--AT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41241 7 +     87928 CC----CAC--AT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6286 7 -     60166 CC----CAC--AT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13222 7 -     67232 CC----CAC--AT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41138 7 -     90634 CC----CAC--AT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42606 7 +     89403 CC----CAC--AT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176204 7 - 189387572 CC----TGC--AT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191022 7 -   9816681 CC----TGC--AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25826 7 +     69807 CC----TGC--AT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43021 7 -     80239 CC----TGC--AT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_23273                 34029 7 -     63916 CC----CGT--GT
i Procavia_capensis.ProCapCap_scaffold_23273             n 7 n 7
s Prolemur_simus.MPIZ01000396.1                            1981151 7 +   4620579 CT----TGT--GT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564618 7 -   2598838 CT----TGT--GT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2254 7 -      7103 CT----TGT--GT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2851 7 -     11706 CT----TGT--GT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6587 7 -     30655 CT----TGT--GT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32912 7 +     46564 CT----TGT--GT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93183 7 -     98465 CT----TGT--GT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6820 7 +     35169 CT----TGT--GT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34708 7 +     52041 TT----AGT--AC
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50240 7 -     66298 CT----CAT--GC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3250 7 -     18639 CC----TAT--GT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839472 7 -  28871421 CC----TAT--GT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535981 7 -   4952924 CC----TAT--GT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097628 7 +  38429054 CC----TAC--AT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25201 7 +     91421 CC----TGC--AT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151694 7 -   7812017 CC----TGC--AT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6071 7 +     72585 CC----TGC--AT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021194 7 -  90668790 TA----TAT--AC
i Rattus_norvegicus.chr16                                I 35 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913375 7 +   3329780 CC----GAG--GT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            27011 7 +     27361 CC----TGC--AT
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120378 7 + 195417433 CC----TGC--AT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234619 7 -   7961872 CC----TGC--AT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73394 7 -    116970 CC----TAT--AT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2587 7 +     27962 CC----TGC--CT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2482 7 +      6077 CC----TGC--CT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2574 7 +      5971 CC----TGC--CT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2516 7 +      5932 CC----TGC--CT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               839 7 -      4390 CC----TGC--CT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390271 7 - 209938924 CC----TGC--CT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2464 7 +      5979 CC----TGC--GT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3205 7 -      4301 CC----TGC--CT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236868 7 +   5703754 CG----GGC--CT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6458 7 +     21866 CG----GGC--CT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114566 7 +    313613 CT----TAT--GT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23518 7 +     27374 CC----TGC--AT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27037 7 +     58920 CC----TGC--AT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13533 7 -     45317 CC----TGC--AT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21191 7 -     42441 CC----TGC--AT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23871 7 -     29113 CC----TGC--AT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26940 7 -     48123 CC----TGC--AT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47237 7 +     77746 CC----TGT--AC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856890 7 -   1910179 CC----TAC--AT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866876 7 +   3870691 CC----TGT--GC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5035 7 -     97271 CC----TAT--AT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123467 7 +    196729 CT----TAC--GT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389447 3 +   1523678 --------C--AT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12219 7 +     22964 CC----TAG--GT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1243 7 +      5583 CC----TGT--GC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190153 7 +    199430 CC----TGT--GT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104104 7 -    539355 CC----TGT--GT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5454 7 +      6850 TT----TGT--GT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5502 7 +     20590 TT----TGT--GT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351393 7 - 186847797 CC----TGC--AT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22813 4 -     33621 TC----T----G-
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18381 7 -     31044 CT----TGT--GC
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478262 7 -    610378 CC----TAT--GT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19082 7 +     26378 CC----TGC--AT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31746 7 -     78344 CC----TGC--AT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18403 7 +     25722 CC----TGC--AT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26697 7 -     62838 CC----TGC--AT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26745 7 +     46913 CC----TGC--AT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7551 7 -     28527 CC----TGC--AT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28636 7 -     64340 CC----TGC--AT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26673 7 -     63452 CC----TGC--AT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8116 7 +     22490 CC----TGC--AT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1544 7 -      6147 CC----TGC--AT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8449 7 -     13050 CC----TGC--AT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253688 7 -   6242583 CC----TGC--AT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59439 7 +     59866 CC----TGC--AT
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     766 7 -     21056 CT----AAT--GT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180402 7 +   5085361 CT----TAT--GT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23796 7 -     30710 CT----TGT--GT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22703 7 -    147434 CT----TGT--GT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103552 7 -    112863 CC----TAT--GT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172654 7 -    224448 CT----TGT--GC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27440 7 -     86975 CC----TAT--GT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1901 7 +      2695 CC----TGT--AT
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822 0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508 0 -   4065304 C
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3728 23 +     36723 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
s Acinonyx_jubatus.LLWD01001279.1                           811375 24 +   1699592 TT----AA----TCTTCA-GGAA-A----------GTG-----T--GAA-GA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18602 24 +     63021 TG----TA----TTGTAA-GGAA-A----------ACA-----T--GAA-GG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413903 24 +  29979442 TT----AA----TCATCA-GGAA-A----------GTG-----A--GAA-GA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214013 24 +    347723 TT----AA----TCACCA-GGAA-A----------GCA-----G--GAA-GA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16527 24 -     61208 TA----AA----TTGTAA-AGAA-A----------GAA-----T--AAA-GA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46054 23 +     53615 TC----AG----TCAGTA-A-AA-A----------GTG-----T--GAA-GA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          41998 23 +     44087 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14636 23 -     21945 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16308 23 +     32033 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70761 23 -     84148 TC----AG----TCCGTAGA-AA-A----------GTG-----T--GAA-G-
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               42994 23 -     78289 TC----AG----TCTGTAGA-AA-A----------GTG-----T--GAA-G-
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42440 23 +     55831 TC----AG----TCCATAGA-AA-A----------GTG-----T--GAA-G-
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40881 23 -     64179 TC----AG----TCCGTAGA-AA-A----------GTG-----T--GAA-G-
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22528 23 -     24835 TC----AG----TCCGTAGA-AA-A----------GTG-----T--GAA-G-
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39511 23 +     45454 TC----AG----TCCGTAGA-AA-A----------GTG-----T--GAA-G-
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45209 23 +     70886 TC----AG----TCCGTAGA-AA-A----------GTG-----T--GAA-G-
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7334 23 +     30854 TC----AG----TCTGTAGA-AA-A----------GTG-----T--GAA-G-
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31473 23 +     42133 TC----AG----TCCGTAGA-AA-A----------GTG-----T--GAA-G-
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175231 24 -    412891 TC----AG----TCTTCA-AGAA-A----------GTG-----T--AAA-GA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49275 23 -     65372 TC----AG----TCGGTAGA-AA-A----------GTG-----T--GAA-G-
i Aotus_azarae.k141_118258                               C 0 I 2
s Aotus_griseimembra.k141_982342                             43029 23 +     43593 TC----AG----TCGGTAGA-AA-A----------GTG-----T--GAA-G-
i Aotus_griseimembra.k141_982342                         C 0 I 2
s Aotus_nancymaae.KZ198451.1                                671042 23 +   5030052 TC----AG----TCGGTAGA-AA-A----------GTG-----T--GAA-G-
i Aotus_nancymaae.KZ198451.1                             C 0 I 2
s Aotus_trivirgatus.k141_192090                              22684 23 -     23494 TC----AG----TCGGTAGA-AA-A----------GTG-----T--GAA-G-
i Aotus_trivirgatus.k141_192090                          C 0 I 2
s Aotus_vociferans.k141_944972                                7820 23 +      8415 TC----AG----TCGGTAGA-AA-A----------GTG-----T--GAA-G-
i Aotus_vociferans.k141_944972                           C 0 I 2
s Aplodontia_rufa.AprRuf_scaffold_46868                      14564 24 -     32367 TC----AA----TTGTCA-GGAA-A----------GTA-----T--GTA-TA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3521 24 -     15198 TC----AG----TCTGCA-GGAA-A----------GTG-----T--AAA-GA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273273 23 +  21539123 TC----AA----TCCGTAGA-AA-A----------GTG-----T--GAA-G-
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9439 23 +     48076 TC----AG----TCCGTAGA-AA-A----------CTG-----T--GAA-G-
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4576 23 -     28759 TC----AA----TCCGTAGA-AA-A----------GTG-----T--GAA-G-
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32130 23 +     44353 TC----AA----TCCGTAGA-AA-A----------GTG-----T--GAA-G-
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47500 23 -     71267 TC----AG----TCCGTAGA-AA-A----------CTG-----T--GAA-G-
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21560 23 -     33135 TC----AA----TCCGTAGA-AA-A----------GTG-----T--GAA-G-
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4741 24 +     11645 TC----AG----TCAACAGG-GA-A----------GCA-----T--AAA-GA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4747 24 -     19611 TC----AG----TCAACAGG-GA-A----------GCA-----T--AAA-GA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6465 23 +     28062 TC----AG----TTGGTAGA-AA-A----------GTG-----T--GAA-G-
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41759 23 -     91139 TC----AG----TTGGTAGA-AA-A----------GTG-----T--GAA-G-
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19285 23 +     95584 TC----AG----TTGGTAGA-AA-A----------GTG-----T--GAA-G-
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19198 23 +    119600 TC----AG----TTGGTAGA-AA-A----------GTG-----T--GAA-G-
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8744 23 +     18648 TC----AG----TTGGTAGA-AA-G----------ATG-----T--G-AAG-
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8282 23 -     13885 TC----AG----CCTGTAGA-AA-G----------ATG-----T--G-AAG-
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             350 23 -      8861 TC----AG----TTGGTAGA-AA-G----------ATG-----T--G-AAG-
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452743 23 + 189096842 TC----AG----TTGGTAGA-AA-G----------ATG-----T--G-AAG-
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                266 23 +      8664 TC----AG----TTGGTAGA-AA-G----------ATG-----T--G-AAG-
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42503929 22 +  60362399 TT----AA----TCATCA-GGAA-A----------GCA-----T----A-GA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7565 22 -     23171 TT----AA----TCATCA-GGAA-A----------GCA-----T----A-GA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220908 22 +   9314153 TT----AA----TCATCA-GGAA-A----------GCA-----T----A-GA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614043 22 +  59632846 TT----AA----TCATCA-GGAA-A----------GCA-----T----A-GA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105624 22 -  63665305 TT----AA----TCATCA-GGAA-A----------GCA-----T----A-GA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268829 24 +    496798 TT----GG----GCAGCA-GGAA-A----------GTG-----T--GAA-GA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3813 24 +      5315 TC----AG----TCTTCA-GGAA-A----------GTG-----G--AAA-GA
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20404 24 -     39886 TT----CC----ATGGTG-ATAA-T----------GTG-----G--GAA-AT
i Castor_canadensis.CasCan_scaffold_39952                I 200 C 0
s Cavia_aperea.AVPZ01000300.1                              4994494 13 +  23392119 ---------------TCA-GCAA-G----------GTT-----T--G-----
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997936 13 +  23407841 ---------------TCA-GCAA-G----------GTT-----T--G-----
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61037 13 -     66877 ---------------TCA-GCAA-G----------GTT-----T--G-----
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3663 23 -     12580 TC----AG----TTGGTAGA-AA-G----------ATG-----T--G-AAG-
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41718 23 +     53515 TC----AG----TTGGTAGA-AA-G----------ATG-----T--G-AAG-
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369656 23 -  26074798 TC----AG----TCGGTAGA-AA-G----------GTG-----T--GAA-G-
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6545 23 -     34880 TC----AG----TCGGTAGA-AA-G----------GTG-----T--GAA-G-
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65640 23 -     89041 TC----AG----TCGGTAGA-AA-G----------GTG-----T--GAA-G-
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          752 24 -      5494 TC----GG----GCAGCA-GGAA-A----------GTG-----T--GAA-GA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490708 24 -  27778364 TC----AA----TCTTTA-GGAG-A----------GTG-----T--GAA-GA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17541 24 +     27315 TC----AA----TCTTTA-GGAG-A----------GTG-----T--GAA-GA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139233 23 -   4669795 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42973 23 +     47900 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42806 23 -     44860 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42789 23 -    148725 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10046 23 -     17524 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25768 23 -     34525 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30244 23 -     45857 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23737 23 +     70610 TC----AG----TCAGTA-A-AA-A----------GTG-----T--GAA-GA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20662 23 +     36323 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11354 24 -     19938 TC----AA----TCTTCA-GAAA-A----------GTG-----T--AAA-GG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29172 24 -     33796 TC----AG----TCAACAGA-CA-A----------GTG-----T--AAA-GA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3688 24 -     15404 TC----AG----TCAACAGA-CA-A----------GTG-----T--AAA-GA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7546 23 -     32913 TC----AC----TCGGTAGA-AA-A----------CCG-----T--GAA-G-
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17959 23 -     40346 TC----AC----TCGATAGA-AA-A----------CCG-----T--GAA-G-
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18214 23 +    216457 TC----AC----TCGGTAGA-AA-A----------CCG-----T--GAA-G-
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18007 23 +     39636 TC----AC----TCGGTAGA-AA-A----------CCG-----T--GAA-G-
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2596 22 +      5346 TC----AG----TCGGTAGA-AA-G----------ATG-----T--GA--G-
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41094 23 -    112038 TC----AG----TCGGTAGA-AA-A----------GTG-----T--GAA-G-
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6666 23 +     34062 TC----AG----TCGGTAGA-AA-A----------GTG-----T--GAA-G-
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341559 23 +  18827391 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8104 23 -     44032 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302884 23 - 135778131 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10409 24 +     15858 CC----AA----TCTTCA-GGAA-A----------GTG-----T--GGA-GA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 5
s Choloepus_hoffmanni.KN194906.1                            601985 24 -    839153 CC----AA----TCTTCA-GGAA-A----------GTG-----T--GGA-GA
i Choloepus_hoffmanni.KN194906.1                         C 0 I 5
s Colobus_angolensis.KN981557.1                             407325 23 -   2368649 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377203 23 - 200372422 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                750 23 -     84244 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805781 24 +  53390261 TA----TA----TCTTAA-GTAA-A----------ATA-----T--GGA-GA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1291 24 -      8242 TC----AA----TCATCA-GGAA-A----------GTA-----T--GAA-GG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 89
s Cricetomys_gambianus.CriGam_scaffold_14425                 40798 22 -     83289 TA----CA----TTGTAA-GGAA-A----------GCA-----T--GAA---
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113270 26 - 224834208 TA----CA----TTGTAA-GGAA-A----------GCA-----TAAGAA-GG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2828 24 +     87169 TT----AT----TCTTCA-GGAA-A----------GTG-----T--GAA-GA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643294 24 -   1526836 TC----AG----TTGTTA-GAAT-A----------GTG-----C--GAA-GA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3515 13 +     50838 ---------------TCA-ACAA-G----------GTT-----T--G-----
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2384 13 +     36344 ---------------TTA-GCAA-G----------GTT-----T--G-----
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108696 24 -   2246927 TC----CA----TCTTCA-GAAA-A----------GTG-----T--GAG-GA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291112 24 +  12879189 TC----AG----TCAACAGG-AA-A----------GTC-----T--GAA-GA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863263 23 -  20541912 TC----AG----TCTTCA-GGAA-A----------GTG-----T--A-A-GG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663000 24 -   1390856 TC----AA----TCTTTA-GGAG-A----------GTG-----T--GAA-GA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137785 24 -    198055 TC----AA----TCTTTA-GGAG-A----------GTG-----T--GAA-GA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97004 13 -    115145 ---------------TCA-GCAA-G----------GTT-----T--G-----
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948853 24 -  37912305 TA----AA----TTGTCA-AGAA-A----------TTG-----C--GCA-AA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3800 24 -     10735 TA----AA----TTGTCA-AGAA-A----------CTG-----C--GCA-AA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8448 13 +     14636 ---------------TCA-GCAA-G----------GTT-----T--G-----
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852457 24 - 111700974 TC----CT----TCTACA-CGGA-A----------GTG-----T--GAA-GA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4829 24 +     19438 TC----AA----TCTTCA-GGAA-A----------GTG-----T--GAG-GA
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9105995 15 -  10337057 GCCACTAT----tctgaa-g--------------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 9
s Ellobius_lutescens.LOEQ01008920.1                          29532 24 +    110024 TA----CA----TCACAA-GAAA-A----------GCA-----T--GAA-GG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11506 24 +     18970 TA----CA----TCACAA-GAAA-A----------GCA-----T--GAA-GG
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914656 24 +  41312741 TT----AA----TCATCA-GAAA-A----------GTG-----T--GAA-GA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576895 25 +  14770903 TC----AA----CCTTCA-GGAAAA----------ATG-----C--GAA-GA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040001 24 -   4378816 TC----AA----TTTTCA-GGAG-A----------GTG-----T--GAA-GA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373925 24 +  39960074 TC----AG----TTTTCA-GGAG-A----------GTG-----T--GAA-GA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410711 24 -    498745 TC----AA----TTTTCA-GGAG-A----------GTG-----T--GAA-GA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               261082 23 +  21539334 TC----AG----TCGGTA-A-AA-A----------GCG-----T--GAA-GA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13284 24 -     24895 TC----AG----TCAACAGG-GA-A----------GCG-----T---AAAGA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               40993 24 -     70999 TC----AG----TCAACAGG-GA-A----------GCG-----T---AAAGA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84955 24 +    112731 TC----AG----TCAACAGG-GA-A----------GCG-----T---AAAGA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41528 24 +     68309 TC----AG----TCAGCAGG-GA-A----------GCG-----T---AAAGA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51850 24 -     65740 TC----AG----TCAACAGG-GA-A----------GCG-----T---AAAGA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22483 24 -     75513 TC----AG----TCAGCAGG-GA-A----------GCG-----T---AAAGA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46676 24 -     97555 TC----AG----TCAACAGG-GA-A----------GCG-----T---AAAGA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3402 24 +     30972 TC----AG----TCAACAGG-GA-A----------GCG-----T---AAAAA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41123 24 -     52037 TC----AG----TCAACAGG-GA-A----------GCG-----T---AAAGA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57527 24 -    111500 TC----AG----TCAACAGG-GA-A----------GCG-----T---AAAGA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245287 24 - 206538554 TT----AA----TCTTCA-GGAA-A----------GTG-----T--GAA-GA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115073 24 - 205367284 TT----AA----TCTTCA-GGAA-A----------GTG-----T--GAA-GA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26175 24 -     30238 TT----AA----TCTTCA-GGAA-A----------GTG-----T--GAA-GA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123070 19 -    137831 TC----A--------GCA-G-AA-A----------GTG-----C--AGA-GA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6615 19 +     22493 TC----A--------GCA-G-AA-A----------GTG-----C--AGA-GA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18667 19 -     32986 TC----A--------GCA-G-AA-A----------GTG-----C--AGA-GA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               5455 24 +      5976 TC----AA----TCAGCA-GGAA-A----------ATG-----T--GAA-GT
i Galeopterus_variegatus.GalVar_scaffold_132127          I 152 I 303
s Glis_glis.GliGli_scaffold_33859                            32729 24 -     36801 TT----AC----TTGTCA-GTAA-A----------GTG-----T--GAA-GA
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4067 23 -      8343 TC----AG----TCGGTA-A-AA-A----------GCG-----T--GAA-GA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253078 23 - 186649187 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     225 24 -     78134 TT----AC----CTGTCA-GTAA-A----------GTG-----T--GAA-GA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13211 24 -     40692 TC----AG----TCAACAGG-GA-A----------GCG-----T---AAAGA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34612 24 +     49394 TC----AG----TCAACAGG-GA-A----------GCG-----T---AAAGA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59481 24 -     66874 TC----AG----TCAACAGG-GA-A----------GCG-----T---AAAGA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8354 24 -     42923 TC----AG----TCAACAGG-GA-A----------GCG-----T---AAAGA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15354 24 -     53142 TC----AG----TCAACAGG-GA-A----------GCG-----T---AAAGA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29314 24 -    327341 TT----AT----TCTTCA-GGAA-A----------GTG-----T--GAA-GA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925571 17 -  22651954 ---------------TCA-GCAA-G----------GTT-----T--GAC-GA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11550 24 +     12639 TC----AG----TCTGCA-GAGA-A----------ATA-----T--GAA-GA
i Heterohyrax_brucei.HetBruBak_scaffold_99956            I 7 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49366 24 +     49977 TC----AA----TCTTCA-GGAA-A----------GTG-----T--AAG-GA
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141067 23 -    630532 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68007 24 +     83186 TT----AA----TCTTCA-GGAA-A----------GTG-----T--GAT-GA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69883 13 +    143317 ---------------TCA-GCAA-G----------GTT-----T--G-----
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4101 23 +     12352 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11284 23 +     55766 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050880 23 + 191637585 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799758 23 +  11177569 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385301 24 +   7955117 TC----AA----TTGTCA-GGAA-A----------GTG-----T--GAG-GA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     864 24 +     11955 TC----AG----TCAACAGG-GA-A----------GCG-----C--AAA-GA
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237715 24 +   9596543 ta----aa----ttataa-agaa-a----------gag-----T--AAA-GA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          41815 23 +    110728 TC----AG----TCCGTAGA-AA-A----------GTG-----T--GAA-G-
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60360 25 -     65777 TC----AA----CCTTCA-GGAAAA----------ATG-----T--GAA-GA
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758003 24 +  30322482 TC----AG----TCAACAGG-GA-A----------GCG-----T---AAAGA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2732 22 -     13097 TC----AG----TCGGTAGA-AA-G----------ATA-----T--G-A-G-
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2487 22 +      5940 TC----AG----CCGGTAGA-AA-G----------ATA-----T--G-A-G-
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2317 22 -      5717 TC----AG----TCGGTAGA-AA-G----------ATA-----T--G-A-G-
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8680 23 -     11567 TC----AG----TCGGTAGA-GA-G----------ATG-----T--G-AAG-
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10061 23 -     12945 TC----AG----TCGGTAGA-GA-G----------ATG-----T--G-AAG-
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7533 24 +     29618 TC----AG----TCAACAGG-GA-A----------GTG-----T--ACA-GA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7530 24 +     31569 TC----GG----TCAACAGG-GA-A----------GTG-----T--ACA-GA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7541 24 +     24756 TC----GG----TCAACAGG-GA-A----------GTG-----T--ACA-GA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7539 24 +     16388 TC----AG----TCAACAGG-GA-A----------GTG-----T--ACA-GA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812050 24 -   3914936 TT----AA----TCATCA-GGAA-A----------GTG-----T--GAA-GA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16387 24 +     24238 TC----AG----TTGGCA-GGAA-A----------GTG-----T--GAG-GG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331186 23 -   1826925 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8828 19 +     19643 TC----A--------GCA-G-AA-A----------GTG-----C--AGA-GA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042489 19 -   6120653 TC----A--------GCA-G-AA-A----------GTG-----C--AGA-GA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078972 24 +  43346337 TC----AT----TCTGCA-GGGA-A----------GTG-----T--GAA-GA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613198 22 +  59628241 TT----AA----TCATCA-GGAA-A----------GCA-----T----A-GA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43503 23 -     61512 TC----AG----TTGGTA-A-AA-A----------CTG-----T--GAA-GA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371164 23 -  60120075 TC----AG----TTGGTA-A-AA-A----------CTG-----T--GAA-GA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23419 23 +     30207 TC----AG----TTGGTA-A-AA-A----------GTG-----T--GAA-GA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20522 23 -     24934 TC----AG----TTGGTA-A-AA-A----------GTG-----T--GAA-GA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23371 23 +     30527 TC----AG----TTGGTA-A-AA-A----------GTG-----T--GAA-GA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34560 23 -     50087 TC----AG----TTGGTA-A-AA-A----------GTG-----T--GAA-GA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44331 23 +     51645 TC----AG----TTGGTA-A-AA-A----------GTG-----T--GAA-GA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413500 23 - 187317192 TC----AG----TTGGTA-A-AA-A----------GTG-----T--GAA-GA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397723 23 +  25927173 TC----AG----TTGGTA-A-AA-A----------GTG-----T--GAA-GA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46887 23 -     62418 TC----AG----TTGGTA-A-AA-A----------GTG-----T--GAA-GA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23542 23 +     24253 TC----AG----TTGGTC-A-AA-A----------CTG-----T--GAA-GA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43362 23 +     59329 TC----AG----TTGGTA-A-AA-A----------GTG-----T--GAA-GA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269290 23 +    668171 TC----AG----TTGGTA-A-AA-A----------GTG-----T--GAA-GA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20477 23 +     21031 TC----AG----TTGGTA-A-AA-A----------CTG-----T--GAA-GA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 1074 23 +     17132 TC----AG----TTGGTA-A-AA-A----------GTG-----T--GAA-GA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221792 24 -    270270 TC----AA----TCTTTA-GGAA-A----------GTA-----T--GAG-GA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320574 23 +  24302211 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355406 23 -    752769 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672080 34 -    737560 TC----AA----TCTTCA-GGAA-AGAAGTACACAGTG-----T--GAG-GA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219367 34 +    317179 TC----AA----TCTTCA-GGAA-AGAAGTACACAGTG-----T--GAG-GA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499525 24 +  40650429 TC----AA----TTGTCA-GGAA-A----------GTG-----T--GAA-GA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148976  9 +    207569 TC----A-----TGTTTA----------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_19308             24543 24 -     74585 TT----AA----TCATCA-GAAA-A----------GTG-----T--GAA-GA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47174 24 -    140813 TC----TA----TTGTAA-GTAA-A----------GCA-----T--GAA-GG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427821 24 +  29670104 TA----CA----TTATAA-AGAA-A----------CCA-----T--GAA-GG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8851 23 +     17804 TC----AG----TTGGTAGA-AA-G----------ATG-----T--G-AAG-
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9356 23 -     12984 TC----AG----TTGGTAGA-AA-G----------ATG-----T--G-AAG-
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17670 23 -     26561 TC----AG----TTGGTAGA-AA-G----------ATG-----T--G-AAG-
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983145 24 +  93316391 TC----AG----TCAACAGA-GA-A----------GTG-----T--AAA-GA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43547 24 +    145209 TC----AT----TCTATA-AGGA-A----------GTG-----T--GAA-GA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183205 22 +    200668 TC----GG----TCTTCA-GGAA-A----------GTG-----T----A-GA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960943 24 +  27267610 TA----TA----TCACAA-GAAA-A----------GCA-----T--GAA-GG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361301 24 -   8254450 TC----AA----TCTTCA-GGGA-A----------GTG-----T--GAA-GA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40202 24 -     48117 TC----AA----TCTTCA-GGGA-A----------GTG-----T--GAA-GA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20600 23 -     27822 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7061 24 +     27589 TT----AA----TCATCA-GGAA-A----------GTG-----T--GAA-GA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     50934 24 -     62432 TC----AG----TCAACAGA-GA-A----------GTG-----T--AAA-GA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177363 24 +    366855 TT----TA----TCTTTA-GGAA-A----------CTG-----T--GAA-GA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17067 24 -     63510 TT----AG----TCTTCA-GGAA-A----------GTG-----T--GAA-GA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37242 25 +     47283 TC----AG----CCCTCA-GGAAAA----------ATG-----T--GAA-GA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   5252 21 +      5579 TG----CA----TTGTAA-GGAG-A----------GCA-----T--GA----
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685955 21 + 129401213 TG----CA----TTGTAA-GGAG-A----------GCA-----T--GA----
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58215844 21 +  89631738 TA----GA----CTGTAA-GGAG-A----------GGA-----T--GA----
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495275 21 + 130317789 TG----CA----TTGTAA-GGAG-A----------GCA-----T--GA----
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81343 24 -     86153 TC----AC----TAGTCA-GTAA-A----------GTG-----T--GAG-GA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353692 24 +  14710649 TT----AA----TCATCA-TAAA-A----------ATG-----T--GAA-GA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791292 25 +  10118263 TT----AA----CCTTCA-GGAAAA----------ATG-----T--ATA-GA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385652 25 +   6019432 TC----AA----CCTTTA-GGAAAA----------ATG-----T--ATG-GA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381474 25 +   4330536 TC----AA----CCTTCA-GGAAAA----------ATG-----T--ATA-GA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          301 25 +     18357 TC----AA----CCTTCA-GGAAAA----------ATG-----T--ATA-GA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118129 24 +    130748 CC----AG----TCTTCA-GAAA-A----------GTG-----G--GAC-AA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              27253 23 +     34575 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467653 24 -  31847680 TT----AA----TCATCA-GGAA-A----------GTG-----T--GAA-GA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126171 24 -    149072 TC----AA----TCTTCA-GGAA-A----------GTG-----T--GAA-GA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           51990 23 -    132029 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8085 23 -     16345 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13970 23 +     22201 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412191 23 -  22158432 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24368 23 -     54323 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196799 22 +   9404916 TT----AA----TCATCA-GGAA-A----------GAA-----T----A-GA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634840 19 + 196305487 TC----A--------GCA-G-AA-A----------GTG-----C--AGA-GA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1598 19 -      3937 TC----A--------GCA-G-AA-A----------GTG-----C--AGA-GA
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563079 19 - 199412804 TC----A--------GCA-G-AA-A----------GTG-----C--AGA-GA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549766 19 -   3988456 -------------TGACA-GGAA-A----------ATG-----T--GAG-GG
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Octodon_degus.JH651603.1                                11046035 13 -  11899542 ---------------TCA-GCAA-G----------GTT-----T--G-----
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450249 24 +   2017862 TT----AA----TCATCA-GGAA-A----------GTG-----T--GAA-GA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91302 24 -    140218 TA----CA----TCACAA-GAAA-A----------GCA-----T--GAA-GG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1669 24 -     41509 TT----CA----TTGTAA-GAAA-A----------GTA-----T--GAA-GT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11941 24 -     14239 TC----AT----TCTGCA-AGAA-A----------GTG-----T--GAA-GA
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102221 24 - 174332312 TC----AG----TTGGCA-GGAA-A----------GTA-----T--GAA-GG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37837 22 +    559221 TT----AA----TCATCA-GAAA-A----------GCG-----T----A-GA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38223 19 -     51505 TC----A--------GCA-G-AA-A----------GTA-----C--AGA-GA
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351226 19 +   1103335 tc----a--------gca-g-aa-a----------gta-----c--aga-ga
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             10632 26 -     26668 TC----A-AGCTCCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Pan_troglodytes.NBAG03003091.1                         I 82 I 526
s Panthera_onca.PanOnc_flattened_line_3271                   22996 24 -    230217 TT----AA----TCTTCA-GGAA-A----------GTG-----T--GAA-GA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460322 24 -  18783137 TT----AA----TCTTCA-GGAA-A----------GTG-----T--GAA-GA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971042 24 +   8748460 TT----AA----TCTTCA-GGAA-A----------GTG-----T--GAA-GA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241414 23 - 183742232 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7878 23 +     21308 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288917 23 -  20919399 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20533 23 -     27687 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13669 23 +     16796 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20479 23 -     23640 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13635 24 +     78924 TT----AA----TCTTCA-GGAA-A----------GTG-----T--GAA-GA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24508 19 +     31479 TC----A--------ACA-G-AA-A----------GTG-----C--AGA-GA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16867 24 -     24908 TC----A--------ACA-G-AA-A----------GTGTTCAAC--AGA-GA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         218 24 +      9367 TA----AA----TAGTCA-AGGA-A----------GTG-----T--GAA-AA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 5
s Peromyscus_maniculatus.KI615324.1                         245395 24 +  18517816 tt----ca----ttaaaa-gaaa-a----------aca-----t--gaa-gg
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30490 17 -     56120 ---------------TCA-GCAG-T----------GTG-----A--GAA-GA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             697 23 +     55023 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          248 23 -     89929 TC----GG----TCAGTA-A-AA-A----------GTG-----T--GAA-GA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             836 23 +     40849 TC----GG----TCAGTA-A-AA-A----------ATG-----T--GAA-GA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252503 23 +  14605196 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1420 25 +     22231 TC----AG----CCTTCA-GGAAAA----------ATG-----T--GAA-GA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63452 23 +    207309 TC----AG----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4546 23 -     25401 TC----AG----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30287 23 +     58159 TC----AG----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30563 23 +     63561 TC----AG----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30326 23 +     51148 TC----AG----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555293 23 -   4542175 TC----AG----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30310 23 +     51125 TC----AG----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6715 23 +     39866 TC----AC----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 11
s Plecturocebus_brunneus.k141_862875                          1800 23 -      9282 TC----AC----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Plecturocebus_brunneus.k141_862875                     C 0 I 11
s Plecturocebus_caligatus.k141_1382851                       41204 23 -     87950 TC----AC----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Plecturocebus_caligatus.k141_1382851                   C 0 I 11
s Plecturocebus_cinerascens.k141_1164729                     41597 23 -     88961 TC----AC----TCGGTAGA-AA-A----------CCG-----T--GAA-G-
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 11
s Plecturocebus_cupreus.k141_2351393                          6296 23 -     39403 TC----AC----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Plecturocebus_cupreus.k141_2351393                     C 0 I 11
s Plecturocebus_dubius.k141_1058799                          41248 23 +     87928 TC----AC----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Plecturocebus_dubius.k141_1058799                      C 0 I 11
s Plecturocebus_grovesi.k141_2013005                          6293 23 -     60166 TC----AC----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Plecturocebus_grovesi.k141_2013005                     C 0 I 11
s Plecturocebus_hoffmannsi.k141_3303950                      13229 23 -     67232 TC----AC----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 11
s Plecturocebus_miltoni.k141_349282                          41145 23 -     90634 TC----AC----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Plecturocebus_miltoni.k141_349282                      C 0 I 11
s Plecturocebus_moloch.k141_1031110                          42613 23 +     89403 TC----AC----TCGGTAGA-AA-A----------GCG-----T--GAA-G-
i Plecturocebus_moloch.k141_1031110                      C 0 I 11
s Pongo_abelii.CM009266.2                                   176211 22 - 189387572 TC----AG----TCAGT--A-AA-A----------GTG-----T--GAA-GA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191029 22 -   9816681 TC----AG----TCAGT--A-AA-A----------GTG-----T--GAA-GA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25833 23 +     69807 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43028 23 -     80239 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8720 24 +     14086 TC----AG----TCTGCA-GAGA-A----------ATA-----T--GAA-GA
i Procavia_capensis.ProCapCap_scaffold_121686            I 7 C 0
s Prolemur_simus.MPIZ01000396.1                            1981158 24 +   4620579 TC----AG----TCAACAGG-GA-A----------GCG-----T---AAAGA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564625 24 -   2598838 TC----AG----TCAACAGG-GA-A----------GTG-----T--AAA-GA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2261 24 -      7103 TC----AG----TCAACAGG-GA-A----------GCG-----T--AAA-GA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2858 24 -     11706 TC----AG----TCAACAGG-GA-A----------GTG-----T--AAA-GA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6594 24 -     30655 TC----AG----TCAACAGG-GA-A----------GTG-----T--AAA-GA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32919 24 +     46564 TC----AG----TCAACAGG-GA-A----------GTG-----T--AAA-GA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93190 24 -     98465 TC----AG----TCAACAGG-GA-A----------GCG-----T--AAA-GA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6827 24 +     35169 TC----AG----TCAACAGG-GA-A----------GCG-----T--AAA-GA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34715 24 +     52041 TC----TA----TTGTAA-GTAA-A----------GCA-----T--GAA-GG
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50247 24 -     66298 TC----AA----TCTTCA-GAAA-A----------GAG-----T--GGA-GA
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3257 24 -     18639 TT----AA----TCATCA-GAAA-A----------GTG-----T--GAA-AA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839479 24 -  28871421 TC----AA----TCTTCA-GGAA-A----------GTG-----T--GAG-GA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3535988 24 -   4952924 TC----AA----TCTTCA-GGAA-A----------GTG-----T--GAG-GA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097635 24 +  38429054 CT----AA----TCTTCA-GGAA-A----------GTG-----T--GAA-GA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25208 23 +     91421 TC----GG----TCAGTA-A-AA-A----------GTG-----T--GAA-GA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151701 23 -   7812017 TC----GG----TCAGTA-A-AA-A----------GTG-----T--GAA-GA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6078 23 +     72585 TC----GG----TCAGTA-A-AA-A----------GTG-----T--GAA-GA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021201 21 -  90668790 TG----CA----TTATAA-GGAA-A----------GTA-----T--GA----
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913382 24 +   3329780 TC----AA----TCTTCA-GGAA-A----------GTG-----T--AAG-GA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            27018 23 +     27361 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120385 23 + 195417433 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234626 23 -   7961872 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73401 24 -    116970 TC----AA----TCTTCA-GGGA-G----------GTG-----T--GAG-GA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2594 22 +     27962 TC----AG----TCAGTAGA-AA-G----------ATG-----T--G-A-G-
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2489 22 +      6077 TC----AG----TCGGTAGA-AA-G----------ATG-----T--G-A-G-
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2581 22 +      5971 TC----AG----CCGGTAGA-AA-G----------ATG-----T--G-A-G-
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2523 22 +      5932 TC----AG----CCGGTAGA-AA-G----------ATG-----T--G-A-G-
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               846 22 -      4390 TC----AG----CCGGTAGA-AA-G----------ATG-----T--G-A-G-
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390278 22 - 209938924 TC----AG----TCGGTAGA-AA-G----------ATG-----T--G-A-G-
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2471 22 +      5979 TC----AG----CCGGTAGA-AA-G----------ATG-----T--G-A-G-
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3212 22 -      4301 TC----AG----TCGGTAGA-AA-G----------ATG-----T--G-A-G-
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236875 23 +   5703754 TC----AG----TCGGTAGA-AA-G----------GTG-----T--GAA-G-
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6465 23 +     21866 TC----AG----TCGGTAGA-AA-G----------GTG-----T--GAA-G-
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114573 24 +    313613 TA----AA----TTTTAA-GAAA-A----------TTA-----T--GAC-AA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 9
s Semnopithecus_entellus.k141_158471                         23525 23 +     27374 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27044 23 +     58920 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13540 23 -     45317 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21198 23 -     42441 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23878 23 -     29113 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26947 23 -     48123 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47244 21 +     77746 TA----CA----TTATAA-GAAA-A----------TCA-----T--GA----
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 415
s Solenodon_paradoxus.SolPar_flattened_line_126            1856897 24 -   1910179 TC----AG----TCTTCG-GGAG-C----------GTA-----T--GAG-GA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866883 24 +   3870691 TC----AA----TTGTCA-GGAA-A----------GTG-----T--GAA-GA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5042 24 -     97271 TT----AA----TCATTA-GGAA-A----------GCG-----T--GAA-GA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123474 24 +    196729 TT----AT----TCTTCA-GGAA-A----------GTG-----T--GAA-GA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389450 23 +   1523678 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12226 24 +     22964 TC----AA----TCTTCA-GGAA-A----------GTA-----A--GAG-GA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1250 24 +      5583 CC----AA----TCTTCA-GAAA-A----------GTG-----G--GAC-AA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 5
s Tapirus_indicus.TapInd_scaffold_7432                      190160 24 +    199430 TC----AA----ACTTTA-GGAG-A----------ATG-----T--GAA-GA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104111 24 -    539355 TC----AA----TCTTTA-GGAG-A----------ATG-----T--GAA-GA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5461 24 +      6850 TC----GG----GCAGCA-GGAA-A----------GTG-----T--GAA-GA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5509 24 +     20590 TC----GG----GCAGCA-GGAA-A----------GTG-----T--GAA-GA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351400 23 - 186847797 TC----AG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22817 17 -     33621 ---------------TCA-GCAA-G----------GTT-----A--GAA-GA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18388 24 -     31044 TC----AA----TCTTCA-GAAA-A----------GTG-----T--AAA-GA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478269 24 -    610378 TC----AA----TCTTCA-GGAA-A----------GTG-----T--GAA-GA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19089 23 +     26378 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31753 23 -     78344 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18410 23 +     25722 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26704 23 -     62838 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26752 23 +     46913 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7558 23 -     28527 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28643 23 -     64340 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26680 23 -     63452 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8123 23 +     22490 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1551 23 -      6147 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8456 23 -     13050 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253695 23 -   6242583 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59446 23 +     59866 TC----GG----TCGGTA-A-AA-A----------GTG-----T--GAA-GA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     773 23 -     21056 TC----AA----T-TTAA-GGAA-A----------GTG-----T--GAA-GA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180409 24 +   5085361 TT----AA----TCATCA-GGAA-A----------GTG-----A--GAA-GA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23803 23 -     30710 TC----AG----TCAACAGG-GA-A----------GCT-----T---AA-GA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22710 23 -    147434 TC----AG----TCAACAGG-GA-A----------GCT-----T---AA-GA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103559 22 -    112863 TT----AA----TCATCA-GGAA-A----------GCG-----T----A-GA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172661 24 -    224448 TC----AA----TTGTCA-GGAA-A----------GTG-----T--GAA-GA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27447 24 -     86975 TT----AA----TCATCA-GGAA-A----------GTG-----T--GAA-GA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1908 24 +      2695 TA----AA----TTATAA-GGGA-G----------GAG-----T--CAA-GA
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508  0 -   4065304 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3751 25 +     36723 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
s Acinonyx_jubatus.LLWD01001279.1                           811399 25 +   1699592 GT--------------AC---CAAG-----C-A--T----------CC--C--T---CATATTG----AGA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18626 25 +     63021 GT--------------AT---TAAA---T-----GA----------TA--T--TT--GA-ATTG----AGG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413927 25 +  29979442 GT--------------AC---TAAC-----C---GT----------CC--C--T---CATATTG----AGA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214037 11 +    347723 GT--------------AC---TAAG---T-----GT-----------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 2
s Allactaga_bullata.AllBul_scaffold_20030                    16551 25 -     61208 GT--------------CC---TAAT----------T----------CT--T-CTT--GAGATTG----AGA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 2
s Allenopithecus_nigroviridis.k141_3755588                   46077 25 +     53615 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42021 25 +     44087 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14659 25 -     21945 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16331 25 +     32033 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70784 25 -     84148 GT--------------AG---TAAG----------T----------CC--C--TCT-CAGATTG----AGA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43017 25 -     78289 GT--------------AG---TAAA----------T----------CC--C--TCT-CAGATTG----AGA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42463 25 +     55831 GT--------------AG---TAAG----------T----------CC--C--TCT-CAGATTG----AGA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40904 25 -     64179 GT--------------AG---TAAG----------T----------CC--C--TCT-CAGATTG----AGA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22551 25 -     24835 GT--------------AG---TAAG----------T----------CC--C--TCT-CAGATTG----AGA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39534 25 +     45454 GT--------------AG---TAAA----------T----------CC--C--TCT-CAGATTG----AGA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45232 25 +     70886 GT--------------AG---TAAG----------T----------CC--C--TCT-CAGACTG----AGA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7357 25 +     30854 GT--------------AG---TAAG----------T----------CC--C--TCT-CAGATTG----AGA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31496 25 +     42133 GT--------------AG---TAAG----------T----------CC--C--TCT-CAGATTG----AGA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175255 25 -    412891 GT--------------GC---TAAT----------G----------CC--CTCT---CATATTG----AAA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49300  9 -     65372 ----------------------------------------------------------AGATTG----AGA
i Aotus_azarae.k141_118258                               I 2 C 0
s Aotus_griseimembra.k141_982342                             43054  9 +     43593 ----------------------------------------------------------AGATTG----AGA
i Aotus_griseimembra.k141_982342                         I 2 C 0
s Aotus_nancymaae.KZ198451.1                                671067  9 +   5030052 ----------------------------------------------------------AGATTG----AGA
i Aotus_nancymaae.KZ198451.1                             I 2 C 0
s Aotus_trivirgatus.k141_192090                              22709  9 -     23494 ----------------------------------------------------------AGATTG----AGA
i Aotus_trivirgatus.k141_192090                          I 2 C 0
s Aotus_vociferans.k141_944972                                7845  9 +      8415 ----------------------------------------------------------AGATTG----AGA
i Aotus_vociferans.k141_944972                           I 2 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14588 25 -     32367 GT--------------AC---TGCG----------A----------CT--T--TC-TAAAAGTG----AGA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3545 25 -     15198 GT--------------AC---TAGG----------C----------CC--CTCT---CATATTG----AAA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273296 25 +  21539123 GT--------------AG---AAAG----------T----------CC--C--TCT-CAGATTG----AGA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9462 25 +     48076 GT--------------AG---AAAG----------T----------CC--C--TCT-CAGATTG----AGA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4599 25 -     28759 GT--------------AG---AAAG----------T----------CC--C--TCT-CAGATTG----AGA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32153 25 +     44353 GT--------------AG---AAAG----------T----------CC--C--TCT-CAGATTG----AGA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47523 25 -     71267 GT--------------AG---AAAG----------T----------CC--C--TCT-CAGATTG----AGA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21583 25 -     33135 GT--------------AG---AAAG----------T----------CC--C--TCT-CAGATTG----AGA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4765 24 +     11645 -T--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4771 24 -     19611 -T--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6488 25 +     28062 GC--------------AG---CAAG----------T----------CC--C--TCT-CAGATTC----AGA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41782 25 -     91139 GC--------------AG---CAAG----------T----------CC--C--TCT-CAGATTC----AGA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19308 25 +     95584 GC--------------AG---CAAG----------T----------CC--C--TCT-CAGATTC----AGA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19221 25 +    119600 GC--------------AG---CAAG----------T----------CC--C--TCT-CAGATTC----AGA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8767 25 +     18648 GT--------------AG---CTAG----------T----------CC--C--TCT-CAGATTG----AGA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8305 25 -     13885 GT--------------AG---CTAG----------T----------CC--C--TCT-CAGATTG----AGA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             373 25 -      8861 GT--------------AG---CTAG----------T----------CC--C--TCT-CAGATTG----AGA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452766 25 + 189096842 GT--------------AG---CTAG----------T----------CC--C--TCT-CAGATTG----AGA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                289 25 +      8664 GT--------------AG---CTAG----------T----------CC--C--TCT-CAGATTG----AGA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42503951 25 +  60362399 GT--------------AC---TAAG---T-----GT----------CC--C--T---CATATTG----AGA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7587 25 -     23171 GT--------------AC---TAAG---T-----GT----------CC--C--T---CATATTG----AGA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220930 25 +   9314153 GT--------------AC---TAAG---T-----GT----------CC--C--T---CATATTG----AGA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614065 25 +  59632846 GT--------------AC---TAAG---T-----GT----------CC--C--T---CATATTG----AGA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105646 25 -  63665305 GT--------------AC---TAAG---T-----GT----------CC--C--T---CATATTG----AGA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268853 25 +    496798 GT--------------AC---TGAA----------G----------CC--C--TCT-CATACTG----AGC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3837 25 +      5315 GT--------------AT---CAAG----------C----------CC--CGCT---CATATTG----AAA
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20428 21 -     39886 GA--------------AC---TAAA----------C----------AG--T--GT--TAGAAAG-------
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994507 29 +  23392119 -----------------------AG----------GAATACTAAGACC--A--TC-TCAGATTG----ATA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4997949 29 +  23407841 -----------------------AG----------GAATACTAAGACC--A--TC-TCAGATTG----ATA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61050 29 -     66877 -----------------------AG----------GAATACTAAGACC--A--TC-TCAGATTG----ATA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3686 25 -     12580 GT--------------AG---CTAG----------T----------CC--C--TCT-CAGATTG----AGA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41741 25 +     53515 GT--------------AG---CTAG----------T----------CC--C--TCT-CAGATTG----AGA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369679 19 -  26074798 GTAGCAAGTCCCTCTCAG---A-------------------------------------------------
i Cebus_albifrons.Contig27                               C 0 I 6
s Cebus_olivaceus.k141_1404781                                6568 19 -     34880 GTAGCAAGTCCCTCTCAG---A-------------------------------------------------
i Cebus_olivaceus.k141_1404781                           C 0 I 6
s Cebus_unicolor.k141_1654760                                65663 19 -     89041 GTAGCAAGTCCCTCTCAG---A-------------------------------------------------
i Cebus_unicolor.k141_1654760                            C 0 I 6
s Cephalopachus_bancanus.k141_1689090                          776 25 -      5494 GT--------------AC---TGAA----------G----------CC--C--TCT-CACACTG----AGC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490732 25 -  27778364 GT--------------AC---TAAA----------A----------CC--CTCT---TATACTG----AGA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17565 25 +     27315 GT--------------AC---TAAA----------A----------CC--CTCT---TATACTG----AGA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139256 25 -   4669795 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       42996 25 +     47900 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42829 25 -     44860 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42812 25 -    148725 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10069 25 -     17524 AT--------------AT---TAAG----------A----------CC--C--TCT-AAGATTG----AGA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25791 25 -     34525 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30267 25 -     45857 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23760 25 +     70610 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20685 25 +     36323 AT--------------AT---TAAG----------A----------CC--C--TCT-AAGATTG----AGA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11378 25 -     19938 GC--------------AC---TAAG----------C----------CC--T--TCT-TAGATTG----TGA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29196 24 -     33796 -T--------------AT---TAAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3712 24 -     15404 -T--------------AT---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7569 25 -     32913 GT--------------AG---CAAG----------T----------CC--C--TCT-CAGATTG----AGA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             17982 25 -     40346 GT--------------AG---CAAG----------T----------CC--C--TCT-CAGATTG----AGA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18237 25 +    216457 GT--------------AG---CAAG----------T----------CC--C--TCT-CAGACTG----AGA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18030 25 +     39636 GT--------------AG---CAAG----------T----------CC--C--TCT-CAGATTG----AGA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2618 25 +      5346 GT--------------AG---CTAG----------T----------CC--C--ACT-CACATTG----AGA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41117 25 -    112038 GC--------------GG---CAAG----------T----------CC--C--TCT-CAGATTC----AGA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6689 25 +     34062 GC--------------AG---CAAG----------T----------CC--C--TCT-CAGATTC----AGA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341582 25 +  18827391 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8127 25 -     44032 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302907 25 - 135778131 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGACTG----AGA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10438  5 +     15858 --------------------------------------------------------------TT----AGA
i Choloepus_didactylus.ChoDid_scaffold_70559             I 5 C 0
s Choloepus_hoffmanni.KN194906.1                            602014  5 -    839153 --------------------------------------------------------------TT----AGA
i Choloepus_hoffmanni.KN194906.1                         I 5 C 0
s Colobus_angolensis.KN981557.1                             407348 25 -   2368649 AT--------------AT---TAAG----------A----------CC--C--TCA-GAGATTG----AGA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377226 25 - 200372422 AT--------------AT---TAAG----------A----------CC--C--TCA-GAGATTG----AGA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                773 25 -     84244 AT--------------AT---TAAG----------A----------CC--C--TCA-GAGATTG----AGA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805805 25 +  53390261 AT--------------AC---TAAG---T--T---T----------CT--C--TC---ATTTTG----aga
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1404 25 -      8242 ac--------------gg---taAT----------C----------CC--CTCT---CATATGG----AGA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 89 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40820 18 -     83289 ------------------------A---T-----GC----------CA--C--TC--CA-ACTG----AGG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113296 25 - 224834208 AT--------------AT---TAAG---TA-----A----------TA--C--TC--GG-GTTG----AAG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2852 25 +     87169 GG--------------AC---CAAG-----C-A--T----------CC--C--T---CATATTG----AAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643318 24 -   1526836 GT--------------AT---TAAG----------C----------CC--T--TC--CACATTG----ATA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3528 19 +     50838 -----------------------AA----------G----------CC--A--TC-TTGGATAG----ATA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2397 29 +     36344 -----------------------AGGAATACTAAGG----------TC--A--TC-TCAGATTG----ATA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108720 25 -   2246927 GC--------------TC---TAAG----------C----------CC--T--TCT-TAGACTG----TGA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291136 25 +  12879189 GT--------------AC---TAAG----------C----------TA--T--TCT-CAGGTTG----AAA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863286 25 -  20541912 GT--------------AC---TAAG----------C----------CC--CTCT---CATATCG----AAA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663024 23 -   1390856 GT--------------AC---TAAA----------A----------CC--C--T---TATACTG----aga
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137809 25 -    198055 GT--------------AC---TAAA----------A----------CC--CTCT---TATACTG----AGA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97017 19 -    115145 -----------------------AG----------G----------CC--A--TC-TCAGATTG----ATA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18948877 26 -  37912305 TT--------------AC---TAAT----------T----------CCTCT--CT--CAGACTG----AGA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3824 26 -     10735 TT--------------AC---TAAT----------T----------CTTCT--CT--CAGACTG----AGA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8461 29 +     14636 -----------------------AG----------GACTACTAAGACC--A--TC-TCAGATTG----ATA
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62852481 25 - 111700974 AC--------------AC---TAAA----------A----------TC--C--TGT-CACATTG----AGA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4853 25 +     19438 GT--------------AT---TGAG----------T----------TA--CTGT---CATTTTG----AGA
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9106019 21 -  10337057 ---------------------aaag----------a----------ac--a--tgt-caGATTG----AGA
i Elephantulus_edwardii.JH947257.1                       I 9 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29556 14 +    110024 AT--------------AT---TAAG---T-----GA----------TA--C--------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 9
s Ellobius_talpinus.LOJH01026522.1                           11530 14 +     18970 GT--------------AT---TAAG---T-----GA----------TA--C--------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 9
s Enhydra_lutris.KZ291758.1                               24914680 25 +  41312741 GT--------------AC---TAAG---T-----GT----------CC--C--T---CATATTG----AGA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576920 25 +  14770903 GT--------------AC---TAAG----------C----------CT--CTCT---TATACTG----AAA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040025 16 -   4378816 GT--------------AC---TGAG----------C----------CC--C--A---TCT-----------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373949 16 +  39960074 GT--------------AC---TGAG----------C----------CC--C--A---TCT-----------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410735 16 -    498745 GT--------------AC---TGAG----------C----------CC--C--A---TCT-----------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               261105 25 +  21539334 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13308 25 -     24895 GT--------------AC---TGAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41017 25 -     70999 GT--------------AC---TGAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              84979 25 +    112731 GT--------------AC---TAAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41552 25 +     68309 GT--------------AC---TGAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51874 25 -     65740 GT--------------AC---TGAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22507 25 -     75513 GT--------------AC---TGAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46700 25 -     97555 GT--------------AC---TGAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3426 25 +     30972 GT--------------AC---TAAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41147 25 -     52037 GT--------------AC---TGAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57551 25 -    111500 GT--------------AC---TGAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245311 25 - 206538554 GT--------------AC---CAAG-----C-A--T----------CC--C--T---CATATTG----AGA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115097 25 - 205367284 GT--------------AC---CAAG-----C-A--T----------CC--C--T---CATATTG----AGA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26199 25 -     30238 GC--------------AC---CAAG-----C-A--T----------CC--C--T---CATATTG----AGA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123089 25 -    137831 GT--------------GC---TAAG----------C----------CC--T--TTC-CAGGCTG----AAA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6634 25 +     22493 GT--------------GC---TAAG----------C----------CC--T--TTC-CAGGCTG----AAA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18686 24 -     32986 GT--------------GC---TAAG----------C----------CC--T--TTC-CA-GCTG----AAA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17625 25 +     18121 GT--------------AT---GAAG----------C----------CC--C--TCT-CAGACTG----AGG
i Galeopterus_variegatus.GalVar_scaffold_74466           I 24 C 0
s Glis_glis.GliGli_scaffold_33859                            32753 24 -     36801 GT--------------AT---TA-G----------C----------CC--T--GC-TCAGATTG----AGA
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4090 25 -      8343 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253101 25 - 186649187 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     249 25 -     78134 GT--------------AC---TATG----------C----------CC--T--TA-TCAGATTG----AGA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13235 25 -     40692 GT--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34636 25 +     49394 GT--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59505 25 -     66874 GT--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8378 25 -     42923 GT--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15378 25 -     53142 GT--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29338 25 -    327341 GT--------------AC---CAAG-----C-A--T----------CC--C--T---CATATTG----AGA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925588 25 -  22651954 AT--------------AC---TAAG----------G----------TC--A--TC-TCAGATTG----ATA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11574 25 +     12639 AT--------------GC---TAAG----------C----------CC--C--TGT-TAGACTG----AGA
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49390 25 +     49977 GT--------------AC---TAAG----------C----------TC--CTCT---CATATTA----AGA
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141090 25 -    630532 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68031 25 +     83186 GT--------------AC---CAAG-----C-A--C----------CC--C--T---CATATTG----AGA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69896 28 +    143317 -----------------------AA----------GAATACTAAGGCC--A--TC-TCAGATTG----AT-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4124 25 +     12352 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11307 25 +     55766 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050903 25 + 191637585 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799781 25 +  11177569 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385325 25 +   7955117 GT--------------AC---TGAG----------T----------CT--T--TC-TCAAATTG----AAA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     888 24 +     11955 -T--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237739 25 +   9596543 GT--------------TC---TAAT----------T----------CC--T-ATT--GAGATTG----AGA
i Jaculus_jaculus.JH725527.1                             C 0 I 2
s Lagothrix_lagothricha.k141_246028                          41838 25 +    110728 GT--------------AC---TGAG----------T----------CC--C--TCT-CAGATTG----AGA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60385 25 -     65777 GA--------------AC---TAAG----------C----------CT--CTCT---TATGCTG----AAA
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758027 25 +  30322482 GT--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----ACA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2754 25 -     13097 GT--------------AG---CTAG----------T----------CC--C--GCT-CAGATTG----AGA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2509 25 +      5940 GT--------------AG---CTAG----------T----------CC--C--GCT-CAGATTG----AGA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2339 25 -      5717 GT--------------AG---CTAG----------T----------CC--C--GCT-CAGATTG----AGA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8703 25 -     11567 GT--------------AG---CTAG----------T----------CC--C--TCT-CAGATTG----AGA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10084 25 -     12945 GT--------------AG---CTAG----------T----------CC--C--TCT-CAGATTG----AGA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7557 24 +     29618 -T--------------AC---TAAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7554 24 +     31569 -T--------------AC---TAAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7565 24 +     24756 -T--------------AC---TAAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7563 24 +     16388 -T--------------AC---TAAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812074 25 -   3914936 GT--------------AC---TAAG---T-----GT----------CC--C--T---TATATTG----ACA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16411 24 +     24238 CT--------------AC---TCC-----------C----------CT--T--TCT-CAGAC--TTTG--A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331209 25 -   1826925 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8847 25 +     19643 GT--------------GC---TAAG----------C----------CC--T--TTC-CAGGCTG----AAA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042508 25 -   6120653 GT--------------GC---TAAG----------C----------CC--T--TTC-CAGGCTG----AAA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39078996 25 +  43346337 AT--------------AC---TAAG----------C----------CC--C--TGT-TAGATGG----AGA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613220 25 +  59628241 GT--------------AC---TAAG---T-----GT----------CC--C--T---CATACTG----AGA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43526 25 -     61512 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371187 25 -  60120075 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23442 25 +     30207 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20545 25 -     24934 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23394 25 +     30527 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34583 25 -     50087 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44354 25 +     51645 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413523 25 - 187317192 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397746 25 +  25927173 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTC----AGA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46910 25 -     62418 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23565 25 +     24253 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43385 25 +     59329 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269313 25 +    668171 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20500 25 +     21031 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 1097 25 +     17132 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221816 25 -    270270 GT--------------AT---CAAG----------C----------TA--CTCT---CATGTTG----AGA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320597 25 +  24302211 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355429 25 -    752769 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672114 25 -    737560 GT--------------AC---AAAG-----C---CC----------CT--C--T---CATACTG----AGA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219401 25 +    317179 GT--------------AC---AAAG-----C---CC----------CT--C--T---CATACTG----AGA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499549 25 +  40650429 GT--------------AC---TGAG----------C----------CT--T--TC-TCAAATTG----AAA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       148988 25 +    207569 GT--------------AC---TAAG----------C----------CC--CTCT---CATATTA----AGA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24567 25 -     74585 GT--------------AC---TAAA---T-----GT----------CC--C--T---CATATTG----AGA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47198 24 -    140813 AT--------------AT----AAG-A-------GA----------TA--G--TC--AA-GTTG----AGG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427845 25 +  29670104 GT--------------AT---TAAG---T-----GA----------TA--C--TC--GA-ATTG----AAG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8874 28 +     17804 GT--------------AGTAGCTAG----------T----------CC--C--TCT-CAGATTG----AGA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9379 25 -     12984 GT--------------AG---CTAG----------T----------CC--C--TCT-CAGATTG----AGA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17693 25 -     26561 GT--------------AG---CTAG----------T----------CC--C--TCT-CAGATTG----AGA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983169 24 +  93316391 -T--------------AC---TAAG----------C----------TC--T--TCT-CGGgttg----aaa
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43571 25 +    145209 AC--------------AC---TCAG----------A----------TC--C--TGC-CACATCG----AGA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183227 25 +    200668 AT--------------AC---TAAG----------C----------CC--ATCT---CATATTG----AAA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960967 14 +  27267610 GT--------------AT---TAAG---T-----GA----------TA--T--------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 9
s Miniopterus_natalensis.LDJU01000034.1                    6361325 25 -   8254450 GT--------------AC---TAAA----------C----------CC--CTCT---TATAATG----AAA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40226 25 -     48117 GT--------------AC---TAAA----------C----------CC--CTCT---TATAATG----AAA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20623 25 -     27822 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7085 25 +     27589 GT--------------AC---TAAG---T-----GT----------CC--C--T---CATATTG----ACA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 5
s Mirza_zaza.k141_766280                                     50958 24 -     62432 -T--------------AC---TAAG----------C----------TC--T--TCT-CGGGTTG----AAA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177387 25 +    366855 GT--------------AC---TAAG----------T----------CC--CTCT---CATATTG----AAA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17091 25 -     63510 GT--------------AC---CAAG-----C-A--T----------CC--C--T---CATATTG----AGA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37267 25 +     47283 GG--------------AC---TAAG----------C----------CT--CTCT---TATACTG----AAA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   5273 19 +      5579 -----------------------AG---T-----GA----------TA--C--TC--AA-ATTA----AGT
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685976 19 + 129401213 -----------------------AG---T-----GA----------TA--C--TC--AA-ATTA----AGT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58215865 19 +  89631738 -----------------------TG---T--T---A----------AA--C--TC--AA-ATTA----GGC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495296 19 + 130317789 -----------------------AG---T-----GA----------TA--C--TC--AA-ATTA----AGT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81367 23 -     86153 GT--------------AC---TAAT----------A----------CC--T--GC-TCAGGTTG----A--
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353716 25 +  14710649 GT--------------AC---TAAG---T-----GT----------CC--C--T---CATATTG----AGA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791317 25 +  10118263 GG--------------AC---TAAG----------C----------CT--CTTT---TATACTG----AAA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385677 25 +   6019432 GG--------------AC---AAAG----------C----------CT--CTCT---TACACTG----AAA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381499 25 +   4330536 AG--------------AC---TAAG----------C----------CA--CTCT---TATACTG----AAA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          326 25 +     18357 GG--------------AC---TAAG----------C----------CG--CTCT---TATACTG----AAA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118153 25 +    130748 AC--------------AC---CAAA----------C----------CC--C--TCT-CTGATTG----AGA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              27276 25 +     34575 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467677 25 -  31847680 GT--------------AC---TAAG---T-----GT----------CC--C--T---CATATTG----AGA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126195 23 -    149072 GT--------------AC---CAAG----------C----------CC--CTGT---CAT--TG----AAA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52013 25 -    132029 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8108 25 -     16345 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             13993 25 +     22201 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412214 25 -  22158432 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24391 25 -     54323 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196821 25 +   9404916 GT--------------AC---TAAG---T-----GT----------CC--C--T---CATATTG----AGA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634859 27 + 196305487 GT--------------GC---TAAG----------C----------CC--T--TTC-CAGGCTG--AAAAA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1617 27 -      3937 GT--------------GC---TAAG----------C----------CC--T--TTC-CAGGCTG--AAAAA
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563098 27 - 199412804 GT--------------GT---TAAG----------C----------CC--T--TTC-CAGGCTG--AAAAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549785 21 -   3988456 CT--------------AC---TCTA----------C----------CC--T--TCT-CAGAC--------A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11046048 19 -  11899542 -----------------------AA----------G----------CC--A--CG-TCAGATAG----ATA
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450273 25 +   2017862 GT--------------AG---TAAG---T-----GT----------CC--C--T---CATATCG----AGA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91326 14 -    140218 GT--------------AT---TAAG---T-----GA----------TA--C--------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 9
s Onychomys_torridus.OnyTor_scaffold_28377                    1693 25 -     41509 GT--------------AT---TAAG---T-----GA----------TA--C--TC--GA-ATTG----AAG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11965 25 -     14239 AC--------------TC---TAAG----------T----------CT--C--TGT-CAAATTG----ATA
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102245 24 - 174332312 CT--------------AC---TCC-----------C----------CT--T--TCT-CAGAC--tttg--a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37859 25 +    559221 GT--------------AC---TAAG---T-----GT----------CC--C--T---CATATTG----AGA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38242 25 -     51505 GT--------------GC---TAAG----------C----------CC--T--TTC-CAGGCTG----AAA
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351245 25 +   1103335 gt--------------gc---TAAG----------C----------CC--T--TTC-CAGGCTG----AAA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1471106 25 - 189151597 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
i Pan_troglodytes.CM009242.2                             I 23 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23020 25 -    230217 GT--------------AC---CAAG-----C-A--T----------CC--C--T---CATATTG----AGA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460346 25 -  18783137 GT--------------AC---CAAG-----C-A--T----------CC--C--T---CATATTG----AGA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971066 25 +   8748460 GT--------------AC---CAAG-----C-A--T----------CC--C--T---CATATTG----AGA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241437 25 - 183742232 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7901 25 +     21308 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288940 25 -  20919399 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20556 25 -     27687 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13692 25 +     16796 AT--------------AT---TACG----------A----------CC--C--TCT-GAGATTG----AGA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20502 25 -     23640 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13659 25 +     78924 GT--------------AC---CAAG-----C-A--T----------CC--C--C---CATATTG----AGA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24527 26 +     31479 GT-G------------GC---TAAG----------C----------CC--T--TTC-CAGGCTG----AAA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16891 26 -     24908 GT-G------------GC---TAAG----------C----------CC--T--TTC-CAGGCTG----AAA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         247 13 +      9367 --------------------------------------------------T--TT--CAGATTG----AGA
i Perognathus_longimembris.PerPac_flattened_line_89005   I 5 C 0
s Peromyscus_maniculatus.KI615324.1                         245419 25 +  18517816 gT--------------AT---TAAG---TA-----A----------TA--C--TC--GA-ATTG----AAG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30507 25 -     56120 AT--------------AC---TGAG----------G----------CC--A--TT-TCAGATTG----ATA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             720 25 +     55023 AT--------------AT---TAAG----------A----------CC--C--TCA-GAGATTG----AGA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          271 25 -     89929 AT--------------AT---TAAG----------A----------CC--C--TCA-GAGATTG----AGA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             859 25 +     40849 AT--------------AT---TAAG----------A----------CC--C--TCA-GAGATTG----AGA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252526 25 +  14605196 AT--------------AT---TAAG----------A----------CC--C--TCA-GAGATTG----AGA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1445 25 +     22231 GT--------------AC---TAAG----------C----------CT--CTCT---TATACTG----AAA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63475 25 +    207309 GC--------------AG---CAAG----------T----------CC--T--TCT-CAGATTC----AGA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4569 25 -     25401 GC--------------AG---AAAG----------T----------CC--C--TCT-CAGATTC----AGA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30310 25 +     58159 GC--------------AG---CAAG----------T----------CC--T--TCT-CAGATTC----AGA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30586 25 +     63561 GC--------------AG---CAAG----------T----------CC--T--TCT-CAGATTC----AGA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30349 25 +     51148 GC--------------AG---CAAG----------T----------CC--T--TCT-CAGATTC----AGA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555316 25 -   4542175 GC--------------AG---AAAG----------T----------CC--C--TCT-CAGATTC----AGA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30333 25 +     51125 GC--------------AG---CAAG----------T----------CC--T--TCT-CAGATTC----AGA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6749 13 +     39866 -----------------------------------------------------TCT-CAGATTG----AGA
i Plecturocebus_bernhardi.k141_2549090                   I 11 C 0
s Plecturocebus_brunneus.k141_862875                          1834 13 -      9282 -----------------------------------------------------TCT-CAGACTG----AGA
i Plecturocebus_brunneus.k141_862875                     I 11 C 0
s Plecturocebus_caligatus.k141_1382851                       41238 13 -     87950 -----------------------------------------------------TCT-CAGACTG----AGA
i Plecturocebus_caligatus.k141_1382851                   I 11 C 0
s Plecturocebus_cinerascens.k141_1164729                     41631 13 -     88961 -----------------------------------------------------TCT-CAGACTG----AGA
i Plecturocebus_cinerascens.k141_1164729                 I 11 C 0
s Plecturocebus_cupreus.k141_2351393                          6330 13 -     39403 -----------------------------------------------------TCT-CAGACTG----AGA
i Plecturocebus_cupreus.k141_2351393                     I 11 C 0
s Plecturocebus_dubius.k141_1058799                          41282 13 +     87928 -----------------------------------------------------TCT-CAGACTG----AGA
i Plecturocebus_dubius.k141_1058799                      I 11 C 0
s Plecturocebus_grovesi.k141_2013005                          6327 13 -     60166 -----------------------------------------------------TCT-CAGATTG----AGA
i Plecturocebus_grovesi.k141_2013005                     I 11 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13263 13 -     67232 -----------------------------------------------------TCT-CAGATTG----AGA
i Plecturocebus_hoffmannsi.k141_3303950                  I 11 C 0
s Plecturocebus_miltoni.k141_349282                          41179 13 -     90634 -----------------------------------------------------TCT-CAGACTG----AGA
i Plecturocebus_miltoni.k141_349282                      I 11 C 0
s Plecturocebus_moloch.k141_1031110                          42647 13 +     89403 -----------------------------------------------------TCT-CAGATTG----AGA
i Plecturocebus_moloch.k141_1031110                      I 11 C 0
s Pongo_abelii.CM009266.2                                   176233 25 - 189387572 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191051 25 -   9816681 GT--------------AT---TAAG----------T----------CC--C--TCT-GAGATTG----AGA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25856 25 +     69807 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43051 25 -     80239 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8744 25 +     14086 AT--------------GC---TAAG----------C----------CC--C--TGT-TAGACTG----AGA
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981182 25 +   4620579 AT--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564649 24 -   2598838 -T--------------AC---TAAG----------C----------CC--T--TCT-TGGGTTG----AAA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2285 24 -      7103 -T--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2882 24 -     11706 -T--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6618 24 -     30655 -T--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32943 24 +     46564 -T--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93214 24 -     98465 -T--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6851 24 +     35169 -T--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34739 25 +     52041 AT--------------AT---TAAG-AA-------A----------TA--C--TC--CA-GTTG----AGG
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50271 23 -     66298 GT--------------AC---TCAG----------C----------TC--CTCT---CA--TTG----AAA
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3281 25 -     18639 GT--------------AC---TAAG---T-----GT----------CC--C--T---CATATTG----ACA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839503 25 -  28871421 GT--------------AT---TGAG----------C----------TA--CTCT---CATGTTG----AGA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536012 25 -   4952924 GT--------------AT---TGAG----------C----------TA--CTCT---CACGTCG----AGA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097659 25 +  38429054 GT--------------AC---CAAG-----C-A--T----------CC--C--T---CATATTG----AGA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25231 25 +     91421 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151724 25 -   7812017 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6101 25 +     72585 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021222 19 -  90668790 -----------------------AG---T-----GA----------TG--C--TT--GA-ATTA----ATG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913406 25 +   3329780 AT--------------AC---TAAG----------C----------TC--CTCT---CATATTa----aga
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            27041 25 +     27361 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120408 25 + 195417433 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234649 25 -   7961872 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73425 25 -    116970 GT--------------AT---TGAG----------C----------TA--CTCT---CATGTTG----AGA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2616 25 +     27962 GT--------------AG---CTAG----------T----------CC--C--ACT-CACATTG----AGA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2511 25 +      6077 GT--------------AG---CTAG----------T----------CC--C--ACT-CACATTG----AGA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2603 25 +      5971 GT--------------AG---CTAG----------T----------CC--C--ACT-CACATTG----AGA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2545 25 +      5932 GT--------------AG---CTAG----------T----------CC--C--ACT-CATATTG----AGA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               868 25 -      4390 GT--------------AG---CTAG----------T----------CC--C--ACT-CACATTG----AGA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390300 25 - 209938924 GT--------------AG---CTAG----------T----------CC--C--ACT-CACATTG----AGA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2493 25 +      5979 GT--------------AG---CTAG----------T----------CC--C--ACT-CACATTG----AGA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3234 25 -      4301 GT--------------AG---CTAG----------T----------CC--C--ACT-CACATTG----AGA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114606 13 +    313613 -----------------------------------------------T--C--TC---ATTTTG----AGA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 9 C 0
s Sapajus_apella.ctg103                                     236898 19 +   5703754 GTAGCAAGTCCCTCTCAG---A-------------------------------------------------
i Sapajus_apella.ctg103                                  C 0 I 6
s Sapajus_macrocephalus.k141_796559                           6488 19 +     21866 GTAGCAAGTCCCTCTCAG---A-------------------------------------------------
i Sapajus_macrocephalus.k141_796559                      C 0 I 6
s Semnopithecus_entellus.k141_158471                         23548 25 +     27374 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27067 25 +     58920 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13563 25 -     45317 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21221 25 -     42441 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23901 25 -     29113 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26970 25 -     48123 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_40772                    20740 25 -     32514 GT--------------GT---TAAA---T-----GA----------TA--C--TC--AA-ATTG----AAG
i Sigmodon_hispidus.SigHis_scaffold_40772                I 56 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856921 24 -   1910179 GT--------------AC---TAAG----------T----------CC--A--TC--AATATTG----AGA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866907 25 +   3870691 GT--------------AC---TGAG----------C----------CT--T--TC-TCAAATTG----AAA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5066 25 -     97271 GT--------------AC---TAAG---T-----GT----------CC--C--T---CATACTG----AGA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123498 25 +    196729 GT--------------AC---CAAG-----C-A--G----------CC--C--A---CATATAG----AGA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389473 25 +   1523678 GT--------------AT---TAAG----------T----------TC--C--TCT-GAGATTG----AGA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12250 25 +     22964 GT--------------GC---TCAG----------C----------CT--CTCT---TACACTG----AAA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1279 15 +      5583 -----------------------------------------------C--A--CTT-CTGATTG----AAA
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 5 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190184 25 +    199430 GT--------------AC---TAAA----------A----------CC--CTCT---CTTATTG----AGG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104135 25 -    539355 GT--------------AC---TAAA----------A----------CC--CTCT---TTTATTG----AGG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5485 25 +      6850 GT--------------AC---TGAA----------G----------CC--C--TCT-CACACTG----AGC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5533 25 +     20590 GT--------------AC---TGAA----------G----------CC--C--TCT-CACACTG----AGC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351423 25 - 186847797 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22834 25 -     33621 AT--------------AC---TGAA----------G----------CC--A--TT-TCAGATTG----ATA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18412 25 -     31044 GC--------------AC---TAAG----------C----------CC--T--TCT-TAGATTG----TGA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478293 25 -    610378 GT--------------AC---TAAG----------C----------CC--CTCT---CATATTG----AAA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19112 25 +     26378 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31776 25 -     78344 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18433 25 +     25722 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26727 25 -     62838 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26775 25 +     46913 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7581 25 -     28527 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28666 25 -     64340 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26703 25 -     63452 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8146 25 +     22490 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1574 25 -      6147 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8479 25 -     13050 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253718 25 -   6242583 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59469 25 +     59866 AT--------------AT---TAAG----------A----------CC--C--TCT-GAGATTG----AGA
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     796 25 -     21056 AT--------------AC---TAAG-----CT---T----------CC--C--TT---GTTTTG----ACA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180433 25 +   5085361 GT--------------AC---TAAC---T-----GT----------CC--C--T---CATATTG----AGA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23826 25 -     30710 GT--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22733 25 -    147434 GT--------------AC---TAAG----------C----------CC--T--TCT-CGGGTTG----AAA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103581 25 -    112863 GT--------------AC---TAAG---T-----GT----------CT--C--T---CATATTG----AGA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172685 25 -    224448 GT--------------AC---TGAG----------C----------CT--T--TC-TAAAATTG----AAA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27471 25 -     86975 GT--------------AC---TAAG---T-----GT----------CC--C--T---CATATTG----AGA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      1932 25 +      2695 GT--------------TC---TAAG----------A----------CC--T-ATT--GGGATTG----AAA
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 61
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508  0 -   4065304 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3776 30 +     36723 GGG-AACA-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
s Acinonyx_jubatus.LLWD01001279.1                           811424 30 +   1699592 GTG-Gaag-ta----------------attttga----g-a--------a-----a-a--------------a-----at-ggCATC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18651 16 +     63021 ATG-AATG-CA----------------ATTTTGA-----------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 14
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413952 30 +  29979442 GTG-Aaag-ta----------------attttga----g-a--------a-----a-a--------------a-----tt-ggcATC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214050 30 +    347723 GTG-Aaag-ta----------------attttga----g-a--------a-----a-a--------------a-----tt-ggCATC
i Ailurus_fulgens.LNAC01001112.1                         I 2 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16578 32 -     61208 --G-AGTA-CA----------------ATTTTGA----A-A--------AAAAAAAAA--------------A-----CC-TG-AT-
i Allactaga_bullata.AllBul_scaffold_20030                I 2 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46102 30 +     53615 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-AGCATC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42046 30 +     44087 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14684 30 -     21945 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16356 30 +     32033 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70809 30 -     84148 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43042 30 -     78289 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42488 30 +     55831 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40929 30 -     64179 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22576 30 -     24835 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39559 30 +     45454 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45257 30 +     70886 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7382 30 +     30854 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31521 30 +     42133 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175280 30 -    412891 GTG-GAGG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----T-TGGCATC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_118258                                   49309 30 -     65372 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CC-GGCATC
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43063 30 +     43593 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671076 30 +   5030052 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CC-GGCATC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22718 30 -     23494 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CC-GGCATC
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7854 30 +      8415 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CC-GGCATC
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14613 29 -     32367 GTG-AATG-TA----------------GTTTTGA----A-A--------A-----A-A--------------A------T-GGCATC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3570 30 -     15198 GTG-GAGG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----C-TGGCATC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273321 30 +  21539123 GGG-AACA-TG----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GACGTC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9487 30 +     48076 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4624 30 -     28759 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32178 30 +     44353 GGG-AACA-TG----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GACGTC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47548 30 -     71267 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21608 30 -     33135 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCGTC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4789 30 +     11645 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------G-----TT-GGCATC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4795 30 -     19611 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------G-----TT-GGCATC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6513 30 +     28062 GGG-AACA-TA----------------ATTTTGG----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41807 30 -     91139 GGG-AACA-TA----------------ATTTTGG----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19333 30 +     95584 GGG-AACA-TA----------------ATTTTGG----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19246 30 +    119600 GGG-AACA-TA----------------ATTTTGG----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8792 30 +     18648 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------G-----CT-GGCATC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8330 30 -     13885 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCTTC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             398 30 -      8861 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------G-----CT-GGCATC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452791 30 + 189096842 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------G-----CT-GGCATC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                314 30 +      8664 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------G-----CT-GGCATC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42503976 30 +  60362399 ATG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7612 30 -     23171 ATG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220955 30 +   9314153 ATG-AAag-ta----------------attttga----g-a--------a-----a-a--------------a-----tt-ggcATC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614090 30 +  59632846 ATG-AAag-ta----------------attttga----g-a--------a-----a-a--------------a-----tt-ggcATC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105671 30 -  63665305 ATG-AAag-ta----------------attttga----g-a--------a-----a-a--------------a-----tt-ggcATC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268878 30 +    496798 GTG-AAAG-CA----------------ATTTTGA----G-G--------A-----A-A--------------A-----TT-GGCATC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3862 30 +      5315 GTG-GAGG-TA----------------ATTTTGA----G-A--------A-----A-A--------------C-----C-TGGCATC
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994536 19 +  23392119 GCG-AGTG-TA----------------ACTTTGG----A-A--------A-------------------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 16
s Cavia_porcellus.DS562891.1                               4997978 19 +  23407841 GCG-AGTG-TA----------------ACTTTGG----A-A--------A-------------------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 16
s Cavia_tschudii.CavTsc_scaffold_23560                       61079 19 -     66877 GCG-AGTG-TA----------------ACTTTGG----A-A--------A-------------------------------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 16
s Cebuella_niveiventris.k141_592277                           3711 30 -     12580 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------G-----CT-GGCATC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41766 30 +     53515 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------G-----CT-GGCATC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369704 30 -  26074798 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cebus_albifrons.Contig27                               I 6 C 0
s Cebus_olivaceus.k141_1404781                                6593 30 -     34880 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cebus_olivaceus.k141_1404781                           I 6 C 0
s Cebus_unicolor.k141_1654760                                65688 30 -     89041 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cebus_unicolor.k141_1654760                            I 6 C 0
s Cephalopachus_bancanus.k141_1689090                          801 30 -      5494 GTG-AAAG-CA----------------ATTTTGA----G-G--------A-----A-A--------------A-----TT-GGCATC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490757 30 -  27778364 GTG-Aaag-ta----------------attttga----g-a--------a-----a-a--------------a-----tt-ggcATC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17590 30 +     27315 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139281 30 -   4669795 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43021 30 +     47900 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42854 30 -     44860 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42837 30 -    148725 GGG-AATG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10094 30 -     17524 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25816 30 -     34525 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30292 30 -     45857 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23785 30 +     70610 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20710 30 +     36323 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11403 32 -     19938 GCC-AAAG-TA-T--A-----------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GACATA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29220 30 -     33796 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3736 30 -     15404 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7594 30 -     32913 GGG-GACA-TA----------------ACTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18007 30 -     40346 GGG-GACA-TA----------------ACTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18262 30 +    216457 GGG-GACA-TA----------------ACTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18055 30 +     39636 GGG-GACA-TA----------------ACTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2643 30 +      5346 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41142 30 -    112038 GGG-AACA-TA----------------ATTTTGG----G-A--------A-----C-A--------------A-----CT-GGCATC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6714 30 +     34062 GGG-AACA-TA----------------ATTTTGG----G-A--------A-----C-A--------------A-----CT-GGCATC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341607 30 +  18827391 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8152 30 -     44032 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302932 30 - 135778131 GGG-AATG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10443 32 +     15858 GCA-AAAG-TA-T---G----------ATTTTGA----G-G--------A-----A-A--------------A-----TT-AACATA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            602019 32 -    839153 GCA-AAAG-TA-T---G----------ATTTTGA----G-G--------A-----A-A--------------A-----TT-AACATA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407373 30 -   2368649 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377251 30 - 200372422 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                798 30 -     84244 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805830 30 +  53390261 gtg-aaat-ta----------------attttag----a-a--------a-----a-a--------------a-----tt-agtATG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1429 22 -      8242 GTG-AAAA-TA----------------CTTATGA----G-A--------A-----A-A--------------A--------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40838 23 -     83289 GTG-ACTG-TG----------------ATTTCGG----G-G--------AA----G-A--------------A--------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 5
s Cricetulus_griseus.LT883664.1                          213113321 30 - 224834208 gtg-aatg-aa----------------attttca----g-g--------a----aa-a--------------a-----at-gcTAT-
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2877 30 +     87169 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643342 43 -   1526836 GTG-TTTA-TC----------------ATTTAAA----A-ACAAAAACAAA----A-A----------TGACA-----TG-GGTATC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26244  9 +     75252 ------------------------------------------------------------------------C-----CT-GGAATT
i Dasyprocta_punctata.DasPun_flattened_line_15900        N 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3547 22 +     50838 GTG-AGTG-TA----------------ATTTTGA----A-G--------GAA---A-------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 15
s Cuniculus_paca.CunPac_flattened_line_7025                   2426 21 +     36344 GTG-AGTA-TA----------------ATTTTGA----A-A--------AA----A-------------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 49
s Dasypus_novemcinctus.JH564415.1                          2108745 32 -   2246927 GCC-CAAG-GG-T--A-----------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291161 30 +  12879189 GTA-AATG-TA----------------ATTTTAA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863311 30 -  20541912 GTG-GAGG-TA----------------ATTTGGA----G-A--------A-----A-A--------------A-----C-TGGCATC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663047 30 -   1390856 gtg-aaat-ta----------------attttga----g-a--------a-----a-a--------------a-----tt-ggCATC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137834 30 -    198055 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97036 21 -    115145 GTG-AGTG-TA----------------ATTTTGA----A-A--------A----GA-------------------------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 11
s Dipodomys_ordii.KN672350.1                              18948903 19 -  37912305 GTG-AATG-TA----------------ATTTTGA----G-A--------A-------------------------------------
i Dipodomys_ordii.KN672350.1                             C 0 I 10
s Dipodomys_stephensi.DipSte_scaffold_89095                   3850 19 -     10735 GTG-AATG-TA----------------ATTTTGA----G-A--------A-------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 10
s Dolichotis_patagonum.DolPat_scaffold_80628                  8490 21 +     14636 GTG-AGTG-TA----------------ACTTTGG----A-A--------AA----A-------------------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 17
s Echinops_telfairi.JH980293.1                            62852506 32 - 111700974 GTA-AAAG-TA----------C----ATCTTTGA----G-A--------A-----A-A--------------G-----TT-CATAGA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               4878 30 +     19438 GTG-aaag-ta----------------attttga----g-a--------a-----a-a--------------a----t-t-ggcATC
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9106040 32 -  10337057 ATG-AGag-ca--------------tctttttga----g-a--------a-----a-a--------------a-----cT-GGCATT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29579 19 +    110024 GTG-AATG-AG----------------AATTTGA----G-G--------A-------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 9 I 10
s Ellobius_talpinus.LOJH01026522.1                           11553 30 +     18970 GTG-AATG-AG----------------ATTTTGA----G-G--------AA----A-A--------------A-----AT-GGTAT-
i Ellobius_talpinus.LOJH01026522.1                       I 9 C 0
s Enhydra_lutris.KZ291758.1                               24914705 30 +  41312741 GTG-Aaag-ta----------------attttga----g-a--------a-----a-a--------------a-----tt-cacATC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576945 29 +  14770903 GCG-GAgg-ta----------------attttga----g-a--------a-----a-a--------------a------a-ggcatc
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                               261130 30 +  21539334 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13333 30 -     24895 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41042 30 -     70999 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85004 30 +    112731 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41577 30 +     68309 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51899 30 -     65740 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22532 30 -     75513 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46725 30 -     97555 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3451 30 +     30972 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41172 30 -     52037 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57576 30 -    111500 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245336 31 - 206538554 GTG-GAag-ta----------------attttga----gga--------a-----aaa--------------a------t-ggcATC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115122 30 - 205367284 GTG-Gaag-ta----------------attttga----g-a--------a-----aaa--------------a------t-ggCATC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26224 30 -     30238 GTG-GAAA-TA----------------ATTTTGA----G-A--------A-----AAA--------------A------T-GGCATC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123114 31 -    137831 GTC-AATGTTA----------------ATTTAGA----G-A--------G-----C-T--------------G-----TT-GACATT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6659 31 +     22493 GTC-AATGTTA----------------ATTTAGA----G-A--------G-----C-T--------------G-----TT-GACGTT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18710 31 -     32986 GTC-AATGTTA----------------ATTTAGA----G-A--------G-----C-T--------------G-----TT-GACATT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17650 29 +     18121 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCA-C
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32777 29 -     36801 TT--CATG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----CT-AGCATC
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4115 30 -      8343 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253126 30 - 186649187 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     274 30 -     78134 TT-ACATA-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----AT-GGCATC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13260 30 -     40692 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34661 30 +     49394 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59530 30 -     66874 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8403 30 -     42923 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15403 30 -     53142 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29363 30 -    327341 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925613 50 -  22651954 GTA-actg-ta----------------attttga----a-a--------a----aa-acccaaacaaacaaaccaaatct-GGTATC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11599 32 +     12639 GTG-AAAG-TA-T---G----------CTTCTGA----G-A--------A-----A-T--------------G-----GT-GCCTTA
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49415 21 +     49977 GTG-AAAA-TA----------------ATTTT-A----T-A--------A-----A-A--------------A--------------
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141115 30 -    630532 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68056 30 +     83186 GTA-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCGTC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69924 13 +    143317 ----------A----------------ACTTTGA----A-A--------AA----A-------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 16
s Hylobates_agilis.k141_1155965                               4149 30 +     12352 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11332 30 +     55766 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050928 30 + 191637585 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799806 30 +  11177569 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385350 30 +   7955117 GTG-AATG-TA----------------GTTTTGA----A-T--------G-----A-A--------------A-----TT-GGCATC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     912 30 +     11955 GTG-AAAG-TA----------------ATTTTGA----G-T--------A-----A-A--------------A-----TT-GGCATC
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237766 28 +   9596543 --G-AGTA-CA----------------ATTCTGG----G-A--------AA----AAA--------------A-----GC-TG-AT-
i Jaculus_jaculus.JH725527.1                             I 2 C 0
s Lagothrix_lagothricha.k141_246028                          41863 30 +    110728 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCGTC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60410 30 -     65777 GTG-GAGG-TA----------------ATTTTGA----G-A--------A-----AAA--------------A------A-GGCATC
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758052 30 +  30322482 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2779 30 -     13097 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2534 30 +      5940 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2364 30 -      5717 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8728 30 -     11567 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCAGT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10109 30 -     12945 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7581 30 +     29618 GTG-AAAG-TA----------------ATTTGGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7578 30 +     31569 GTG-AAAG-TA----------------ATTTGGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7589 30 +     24756 GTG-AAAG-TA----------------ATTTGGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7587 30 +     16388 GTG-AAAG-TA----------------ATTTGGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812099 30 -   3914936 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------G-----TT-GGCATC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16435 30 +     24238 GAA-AAGG-TG----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGTATC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331234 30 -   1826925 GGG-AACG-CC----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8872 31 +     19643 GTC-AATGTTA----------------ATTTAGA----G-A--------G-----C-T--------------G-----TC-AACATT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042533 31 -   6120653 GTC-AATGTTA----------------ATTTAGA----G-A--------G-----C-T--------------G-----TC-AACATT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079021 32 +  43346337 GTG-AAGT-TA-T---G----------CTTTTCA----G-A--------A-----A-A--------------G-----TT-AACATA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613245 30 +  59628241 ATG-Aaag-ta----------------attttga----g-a--------a-----a-a--------------a-----tt-ggcATC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43551 30 -     61512 GGG-AATG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371212 30 -  60120075 GGG-AATG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23467 30 +     30207 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20570 30 -     24934 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23419 30 +     30527 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34608 30 -     50087 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44379 30 +     51645 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413548 30 - 187317192 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397771 30 +  25927173 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46935 30 -     62418 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23590 30 +     24253 GGG-AATG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43410 30 +     59329 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269338 30 +    668171 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20525 30 +     21031 GGG-AATG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 1122 30 +     17132 GGG-AATG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221841 30 -    270270 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A----T-T-GGCATC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320622 30 +  24302211 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355454 30 -    752769 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672139 30 -    737560 ATG-GAAA-tg----------------attttga----g-a--------a-----a-c--------------a-----ct-ggcatC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219426 30 +    317179 ATG-GAAA-tg----------------attttga----g-a--------a-----a-c--------------a-----ct-ggcatC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499574 30 +  40650429 GTG-AATG-TA----------------GTTTTGA----A-T--------G-----A-A--------------A-----TT-GGCATC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149013 22 +    207569 ATG-AAAA-TA----------------ATTTTGA----G-A--------A-----A-A--------------T--------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24592 30 -     74585 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GACATC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47222 20 -    140813 GT--AATG-CA----------------ATTTTAATTAAA------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 10
s Mesocricetus_auratus.KB708134.1                         17427870 30 +  29670104 GTg-gatg-aa----------------attttca----g-g--------a----aa-a--------------a-----at-gcTAT-
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8902 30 +     17804 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------G-----CT-GGCATC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9404 30 -     12984 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------G-----CT-GGCATC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17718 30 -     26561 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------G-----CT-GGCATC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983193 30 +  93316391 atg-aaag-ta----------------attttga----g-a--------a-----a-a--------------a-----tt-ggcatc
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43596 32 +    145209 GTA-AAAG-TG----------C-G---TCTCTGA----G-A--------A-----A-C--------------G-----TT-AACCGA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183252 30 +    200668 GTG-GAGG-TA----------------ATTTTGA----G-A--------A-----G-A--------------A-----C-TGCCATC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15960990 30 +  27267610 GTG-AATG-AG----------------ATTTTGA----G-G--------AA----G-A--------------A-----AT-GGTAT-
i Microtus_ochrogaster.CM001695.1                        I 9 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361350 30 -   8254450 GTG-GAGG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40251 30 -     48117 GTG-GAGG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         20648 19 -     27822 GGG-AACG-TA----------------ATTTTAA----G-A--------A-------------------------------------
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7115 21 +     27589 ---------------------------ATTTTGA----G-A--------A-----A-A--------------G-----TT-GGCATC
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 5 C 0
s Mirza_zaza.k141_766280                                     50982 30 -     62432 GTG-AAAG-TC----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GACATC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177412 30 +    366855 TTG-GAGG-TA----------------GTTTTGA----G-A--------G-----A-A--------------A-----C-TGACATC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17116 30 -     63510 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37292 29 +     47283 GTG-GAGG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A------A-GGCATC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.FMAL02030609.1                                   5292 31 +      5579 GTA-AGta-ca----------------attttga----a-g--------a----aa-a--------------a-a---gt-gTTAT-
i Mus_caroli.FMAL02030609.1                              C 0 C 0
s Mus_musculus.chr8                                       41685995 31 + 129401213 GTG-AGTa-ca----------------attttga----a-g--------a----aa-a--------------a-a---at-cttat-
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58215884 30 +  89631738 GTG-AGta-ca----------------attttga----a-g--------a----aa-a--------------a-----at-tgTAT-
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495315 31 + 130317789 GTG-AGTa-tg----------------attttga----a-g--------a----aa-a--------------a-a---at-cttat-
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                             14353741 30 +  14710649 GTG-AAAg-tg----------------attttga----g-a--------a-----a-a--------------a-----tt-gaCATC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791342 29 +  10118263 GTG-GAgg-ta----------------attttga----g-a--------a-----a-a--------------a------a-ggcatc
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385702 29 +   6019432 GTT-GAgg-ta----------------attttga----g-a--------a-----a-a--------------a------a-ggcatc
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381524 29 +   4330536 GTG-GAgg-ta----------------attttga----g-a--------a-----a-a--------------a------a-ggcatc
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          351 29 +     18357 GTG-GAGG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A------A-GGCATC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118178 20 +    130748 GCA-AAAG-TA-T--A-----------ATTTTGA----G-A----------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 11
s Nasalis_larvatus.k141_1350636                              27301 30 +     34575 GGG-AACG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467702 30 -  31847680 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------G-----TT-GGCATC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126218 15 -    149072 GTG-GAGG-TA----------------ATCGTG------------------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 4
s Nomascus_annamensis.k141_1771965                           52038 30 -    132029 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8133 30 -     16345 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14018 30 +     22201 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412239 30 -  22158432 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24416 30 -     54323 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196846 30 +   9404916 ATG-Aaag-ta----------------attttga----g-a--------a-----a-a--------------a-----tt-ggcATC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634886  5 + 196305487 GTC-AA---------------------------------------------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 I 10
s Nycticebus_coucang.k141_3846325                             1644  5 -      3937 GTC-AA---------------------------------------------------------------------------------
i Nycticebus_coucang.k141_3846325                        C 0 I 10
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563125  5 - 199412804 GTC-AA---------------------------------------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 10
s Ochotona_princeps.JH802162.1                             2549806 20 -   3988456 GAG-AAAC-TA----------------GTTTTGA----G-A--------A-----A-------------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 10
s Octodon_degus.JH651603.1                                11046067 22 -  11899542 GTG-Agtg-ta----------------attttga----a-a--------g---ata-------------------------------
i Octodon_degus.JH651603.1                               C 0 I 15
s Odobenus_rosmarus.KB229312.1                             1450298 30 +   2017862 GTG-aaag-ta----------------attttta----g-a--------a-----a-a--------------a-----tt-ggcATC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91349 30 -    140218 GTG-AATG-AG----------------ATTTTGA----G-G--------AA----T-A--------------A-----AT-GGTGT-
i Ondatra_zibethicus.OndZib_scaffold_7387                I 9 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1718 30 -     41509 GTG-AATG-AA----------------ATTTTGA----G-G--------AA----A-A--------------A-----AT-GGTAT-
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              11990 32 -     14239 ATG-AAAG-TA-T--A-----------CTTTTGA----G-A--------A-----A-A--------------G-----TT-AATTTA
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102269 30 - 174332312 gag-aaaa-ta----------------attttga----g-a--------a-----a-a--------------a-----cT-GGTATC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37884 30 +    559221 ATG-AAag-ta----------------attttga----g-a--------a-----a-a--------------a-----tt-ggcATC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38267 31 -     51505 GTC-AATGTTA----------------ATTTAGA----G-A--------G-----C-T--------------G-----TT-GACATT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351270 31 +   1103335 GTC-AATGTTA----------------ATTTAGA----G-A--------G-----C-T--------------G-----TT-GACATT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1471131 30 - 189151597 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23045 30 -    230217 GTG-GAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----AT-GGCATC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460371 30 -  18783137 GTG-Gaag-ta----------------attttga----g-a--------a-----a-a--------------a-----at-ggCATc
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971091 30 +   8748460 GTG-Gaag-ta----------------attttga----g-a--------a-----a-a--------------a-----at-ggCATc
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241462 30 - 183742232 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7926 30 +     21308 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288965 30 -  20919399 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20581 30 -     27687 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13717 30 +     16796 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20527 30 -     23640 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13684 30 +     78924 GTG-AAAG-TA----------------CTTCTAA----G-G--------A-----A-A--------------A-----AT-GACATC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24553 27 +     31479 GTC-AATGTTAATTTAGAGAGCTGTTGA-----------------------------------------------------------
i Perodicticus_ibeanus.k141_1921260                      C 0 I 4
s Perodicticus_potto.k141_1854441                            16917 27 -     24908 GTC-AATGTTAATTTAGAGAGCTGTTGA-----------------------------------------------------------
i Perodicticus_potto.k141_1854441                        C 0 I 4
s Perognathus_longimembris.PerPac_flattened_line_89005         260 19 +      9367 GTG-AATA-TG----------------ATTTTGA----G-G--------A-------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 9
s Peromyscus_maniculatus.KI615324.1                         245444 11 +  18517816 GTG-AATG-AA----------------AT----------------------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 5
s Petromus_typicus.PetTyp_scaffold_17301                     30532 44 -     56120 GTG-AATA-TA----------------ACTTTGA----A-A--------AA----A-A-CCAGACAGACGAAC-----TT-AGTGTC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             745 30 +     55023 GGG-AACG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          296 30 -     89929 GGG-AACG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             884 30 +     40849 GGG-AACG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252551 30 +  14605196 GGG-AACG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1470 29 +     22231 GTG-GAGG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A------A-GGCATC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63500 30 +    207309 GGG-AGCA-TA----------------ATTTTGG----G-A--------A-----C-A--------------A-----CT-GGCATC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4594 30 -     25401 GGG-AGCA-TA----------------ATTTTGG----G-A--------A-----C-A--------------A-----CT-GGCATC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30335 30 +     58159 GGG-AGCA-TA----------------ATTTTGG----G-A--------A-----C-A--------------A-----CT-GGCATC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30611 30 +     63561 GGG-AGCA-TA----------------ATTTTGG----G-A--------A-----C-A--------------A-----CT-GGCATC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30374 30 +     51148 GGG-AGCA-TA----------------ATTTTGG----G-A--------A-----C-A--------------A-----CT-GGCATC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555341 30 -   4542175 GGG-AGCA-TA----------------ATTTTGG----G-A--------A-----C-A--------------A-----CT-GGCATC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30358 30 +     51125 GGG-AGCA-TA----------------ATTTTGG----G-A--------A-----C-A--------------A-----CT-GGCATC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6762 30 +     39866 GGG-GACA-TG----------------ACTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1847 30 -      9282 GGG-GACA-TG----------------ACTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41251 30 -     87950 GGG-GACA-TG----------------ACTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41644 30 -     88961 GGG-GACA-TG----------------ACTTTGA----T-T--------A-----A-A--------------A-----CT-GGCATC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6343 30 -     39403 GGG-GACA-TG----------------ACTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41295 30 +     87928 GGG-GACA-TG----------------ACTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6340 30 -     60166 GGG-GACA-TG----------------ACTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13276 30 -     67232 GGG-GACA-TG----------------ACTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41192 30 -     90634 GGG-GACA-TG----------------ACTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42660 30 +     89403 GGG-GACA-TG----------------ACTTTGA----G-A--------A-----A-A--------------A-----CT-GGCATC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176258 29 - 189387572 GGG-AACA-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GG-ATC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191076 29 -   9816681 GGG-AACA-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GG-ATC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25881 30 +     69807 GGG-AACG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43076 30 -     80239 GGG-AACG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8769 32 +     14086 GTG-AAAG-TA-T---G----------CTTCTGA----G-A--------A-----A-T--------------G-----GT-GCCTTA
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981207 30 +   4620579 GTG-AAag-ta----------------attttga----g-a--------a-----a-a--------------a-----tt-ggcCTC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564673 30 -   2598838 GTG-Aaag-ta----------------attttga----g-a--------a-----a-a--------------a-----tt-ggcATC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2309 30 -      7103 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2906 30 -     11706 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6642 30 -     30655 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32967 30 +     46564 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93238 30 -     98465 GTG-AAAA-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6875 30 +     35169 GTG-AAAA-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34764 32 +     52041 GTG-aatg-ca----------------at--taattaaa-a--------a----aa-a--------------a-----ac-tttat-
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50294 30 -     66298 GTG-GAGg-ta----------------attttga----g-a--------a-----a-a--------------a-----c-tggccag
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3306 30 -     18639 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GACATC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839528 30 -  28871421 GTG-aaag-ta----------------attttga----g-a--------a-----a-a--------------a----t-t-ggcATC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536037 30 -   4952924 GTG-Aaag-ta----------------attttga----g-a--------a-----a-a--------------a----t-t-ggcATC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097684 31 +  38429054 GTG-Gaag-ta----------------attttga----g-a--------a-----aaa--------------a-----at-ggcatc
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25256 30 +     91421 GGG-AACG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151749 30 -   7812017 GGG-AACG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6126 30 +     72585 GGG-AACG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021241 29 -  90668790 GTG-AATA-CA----------------ATTTTGA----G-G--------A-----A-A--------------A-----AT-TGTAT-
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913431 21 +   3329780 gtg-aaaa-ta----------------atttt-a----g-a--------a-----a-a--------------a--------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            27066 30 +     27361 GGG-AACG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120433 30 + 195417433 GGG-AACG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234674 30 -   7961872 GGG-AACG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73450 30 -    116970 GTG-AAAG-TA----------------ATTTTGA----G-G--------A-----A-A--------------A----C-T-GGCATC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2641 30 +     27962 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2536 30 +      6077 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2628 30 +      5971 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2570 30 +      5932 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               893 30 -      4390 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390325 30 - 209938924 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2518 30 +      5979 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3259 30 -      4301 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236923 30 +   5703754 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Sapajus_apella.ctg103                                  I 6 C 0
s Sapajus_macrocephalus.k141_796559                           6513 30 +     21866 GGG-AACA-TA----------------ATTTTGA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Sapajus_macrocephalus.k141_796559                      I 6 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114619 30 +    313613 GTG-AAAT-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-AGTATG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23573 30 +     27374 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27092 30 +     58920 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13588 30 -     45317 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21246 30 -     42441 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23926 30 -     29113 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          26995 30 -     48123 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_40772                    20765 31 -     32514 GTG-AATG-AA----------------ATTTTGA----G-G-------GGA----A-A--------------A-----AT-GGTCT-
i Sigmodon_hispidus.SigHis_scaffold_40772                C 0 n 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856945 30 -   1910179 GTG-AAAG-TA----------------ATTTTGG----G-A--------A-----A-A--------------A-----TT-GGCATC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866932 30 +   3870691 GTG-AATG-TA----------------GTTTTGA----A-T--------G-----A-A--------------A-----TT-GGCATC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5091 30 -     97271 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123523 30 +    196729 GTG-AGAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389498 30 +   1523678 GGG-AACG-TA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12275 30 +     22964 GTG-GAGG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----GT-GGCAAC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1294 20 +      5583 GTA-AAAG-TA-T--------C-----ATTTTGA----G-A----------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 11
s Tapirus_indicus.TapInd_scaffold_7432                      190209 30 +    199430 GTG-AGAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GATATC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104160 30 -    539355 GTG-AGAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GACATC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5510 30 +      6850 GTG-AAAG-CA----------------ATTTTGA----G-G--------A-----A-A--------------A-----TT-GGCATC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5558 30 +     20590 GTG-AAAG-CA----------------ATTTTGA----G-G--------A-----A-A--------------A-----TT-GGCATC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351448 30 - 186847797 GGG-AACG-CA----------------ATTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22859 21 -     33621 GTG-AATG-TA----------------ATTTTGA----A-A--------A----GA-------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 21
s Tolypeutes_matacus.TolMat_scaffold_31955                   18437 32 -     31044 GCC-AAAG-TG-T--A-----------AATTTGA----G-A--------A-----A-A--------------A-----TT-GACATA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478318 30 -    610378 GTG-GAGG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----C-TGGCATC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19137 30 +     26378 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31801 30 -     78344 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18458 30 +     25722 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26752 30 -     62838 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26800 30 +     46913 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7606 30 -     28527 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28691 30 -     64340 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26728 30 -     63452 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8171 30 +     22490 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1599 30 -      6147 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8504 30 -     13050 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253743 30 -   6242583 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59494 30 +     59866 GGG-AATG-TA----------------ACTTTAA----G-A--------A-----C-A--------------A-----CT-GGCATC
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     821 30 -     21056 GTG-AAAG-TA----------------ATTCTGA----G-A--------T-----A-A--------------A-----TT-ATTATG
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180458 30 +   5085361 GTG-Aaag-ta----------------attttga----g-a--------a-----a-a--------------a-----tt-ggCATC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23851 30 -     30710 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22758 30 -    147434 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103606 30 -    112863 ATG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172710 30 -    224448 GTG-AATG-TA----------------GTTTTGA----A-T--------G-----A-A--------------A-----TT-GGCATC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27496 30 -     86975 GTG-AAAG-TA----------------ATTTTGA----G-A--------A-----A-A--------------A-----TT-GGCATC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2018 29 +      2695 ATG-AATG-AA----------------ATTTTGA----A-A--------AA----A-A--------------A-----CC-TG-AT-
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 61 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508  0 -   4065304 C
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             81390  0 -     86153 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Equus_przewalskii.KK951119.1                              410751  0 -    498745 C
e Equus_caballus.CM000403.2                               21373965  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041  0 -   4378816 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20449  0 -     39886 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3806 1 +     36723 A
s Acinonyx_jubatus.LLWD01001279.1                           811454 1 +   1699592 a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18681 1 +     63021 A
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 14 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413982 1 +  29979442 A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214080 1 +    347723 A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16610 1 -     61208 A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 6
s Allenopithecus_nigroviridis.k141_3755588                   46132 1 +     53615 A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42076 1 +     44087 A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14714 1 -     21945 A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16386 1 +     32033 A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70839 1 -     84148 A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43072 1 -     78289 A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42518 1 +     55831 A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40959 1 -     64179 A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22606 1 -     24835 A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39589 1 +     45454 A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45287 1 +     70886 A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7412 1 +     30854 A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31551 1 +     42133 A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175310 1 -    412891 A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 17
s Aotus_azarae.k141_118258                                   49339 1 -     65372 A
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43093 1 +     43593 A
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671106 1 +   5030052 a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22748 1 -     23494 A
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7884 1 +      8415 A
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14642 1 -     32367 G
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3600 1 -     15198 A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 17
s Ateles_geoffroyi_b.tarseq_1536                               273351 1 +  21539123 A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9517 1 +     48076 A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4654 1 -     28759 A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32208 1 +     44353 A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47578 1 -     71267 A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21638 1 -     33135 A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4819 1 +     11645 A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4825 1 -     19611 A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6543 1 +     28062 A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41837 1 -     91139 A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19363 1 +     95584 A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19276 1 +    119600 A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8822 1 +     18648 A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8360 1 -     13885 A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             428 1 -      8861 A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452821 1 + 189096842 A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                344 1 +      8664 A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42504006 1 +  60362399 A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7642 1 -     23171 A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          220985 1 +   9314153 A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614120 1 +  59632846 A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105701 1 -  63665305 A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268908 1 +    496798 A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3892 1 +      5315 A
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 17
s Cavia_aperea.AVPZ01000300.1                              4994571 1 +  23392119 A
i Cavia_aperea.AVPZ01000300.1                            I 16 C 0
s Cavia_porcellus.DS562891.1                               4998013 1 +  23407841 A
i Cavia_porcellus.DS562891.1                             I 16 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61114 1 -     66877 A
i Cavia_tschudii.CavTsc_scaffold_23560                   I 16 C 0
s Cebuella_niveiventris.k141_592277                           3741 1 -     12580 A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41796 1 +     53515 A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369734 1 -  26074798 A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6623 1 -     34880 A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65718 1 -     89041 A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          831 1 -      5494 A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490787 1 -  27778364 A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17620 1 +     27315 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139311 1 -   4669795 A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43051 1 +     47900 A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42884 1 -     44860 A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42867 1 -    148725 A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10124 1 -     17524 A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25846 1 -     34525 A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30322 1 -     45857 A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23815 1 +     70610 A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20740 1 +     36323 A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11435 1 -     19938 A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29250 1 -     33796 A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3766 1 -     15404 A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7624 1 -     32913 A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18037 1 -     40346 A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18292 1 +    216457 A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18085 1 +     39636 A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2673 1 +      5346 A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41172 1 -    112038 A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6744 1 +     34062 A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341637 1 +  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8182 1 -     44032 A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302962 1 - 135778131 A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10475 1 +     15858 A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            602051 1 -    839153 A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407403 1 -   2368649 A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377281 1 - 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                828 1 -     84244 A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805860 1 +  53390261 A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40866 1 -     83289 A
i Cricetomys_gambianus.CriGam_scaffold_14425             I 5 C 0
s Cricetulus_griseus.LT883664.1                          213113351 1 - 224834208 A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2907 1 +     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643385 1 -   1526836 A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3584 1 +     50838 A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 15 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2496 1 +     36344 A
i Cuniculus_paca.CunPac_flattened_line_7025              I 49 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26253 1 +     75252 A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108777 1 -   2246927 A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291191 1 +  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863341 1 -  20541912 c
i Desmodus_rotundus.KZ672289.1                           C 0 I 17
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663077 1 -   1390856 A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137864 1 -    198055 A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97068 1 -    115145 A
i Dinomys_branickii.DinBra_scaffold_10381                I 11 C 0
s Dipodomys_ordii.KN672350.1                              18948932 1 -  37912305 G
i Dipodomys_ordii.KN672350.1                             I 10 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3879 1 -     10735 G
i Dipodomys_stephensi.DipSte_scaffold_89095              I 10 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8528 1 +     14636 A
i Dolichotis_patagonum.DolPat_scaffold_80628             I 17 C 0
s Echinops_telfairi.JH980293.1                            62852538 1 - 111700974 A
i Echinops_telfairi.JH980293.1                           C 0 I 203
s Eidolon_helvum.AWHC01266696.1                               4908 1 +     19438 a
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9106072 1 -  10337057 G
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29608 1 +    110024 A
i Ellobius_lutescens.LOEQ01008920.1                      I 10 C 0
s Ellobius_talpinus.LOJH01026522.1                           11583 1 +     18970 A
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914735 1 +  41312741 A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12576974 1 +  14770903 a
i Eptesicus_fuscus.JH977646.1                            C 0 I 17
s Erythrocebus_patas.Contig38                               261160 1 +  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13363 1 -     24895 A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41072 1 -     70999 A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85034 1 +    112731 A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41607 1 +     68309 A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51929 1 -     65740 A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22562 1 -     75513 A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46755 1 -     97555 A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3481 1 +     30972 A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41202 1 -     52037 A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57606 1 -    111500 A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245367 1 - 206538554 a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115152 1 - 205367284 a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26254 1 -     30238 A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123145 1 -    137831 A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6690 1 +     22493 A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18741 1 -     32986 A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17679 1 +     18121 A
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32806 1 -     36801 A
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4145 1 -      8343 A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253156 1 - 186649187 A
i Gorilla_gorilla.LT578341.1                             C 0 I 76
s Graphiurus_murinus.GraMur_scaffold_10447                     304 1 -     78134 A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13290 1 -     40692 A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34691 1 +     49394 A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59560 1 -     66874 A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8433 1 -     42923 A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15433 1 -     53142 A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29393 1 -    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925663 1 -  22651954 A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11631 1 +     12639 G
i Heterohyrax_brucei.HetBruBak_scaffold_99956            C 0 I 37
s Hoolock_leuconedys.ctg274                                    141145 1 -    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68086 1 +     83186 C
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69953 1 +    143317 A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 16 C 0
s Hylobates_agilis.k141_1155965                               4179 1 +     12352 A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11362 1 +     55766 A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050958 1 + 191637585 A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799836 1 +  11177569 A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385380 1 +   7955117 A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                     942 1 +     11955 A
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237794 1 +   9596543 A
i Jaculus_jaculus.JH725527.1                             C 0 I 6
s Lagothrix_lagothricha.k141_246028                          41893 1 +    110728 A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60440 1 -     65777 A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 17
s Lemur_catta.scaffold_24                                 14758082 1 +  30322482 A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2809 1 -     13097 A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2564 1 +      5940 A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2394 1 -      5717 A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8758 1 -     11567 A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10139 1 -     12945 A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7611 1 +     29618 A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7608 1 +     31569 A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7619 1 +     24756 A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7617 1 +     16388 A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812129 1 -   3914936 A
i Leptonychotes_weddellii.KB714746.1                     C 0 I 32
s Lepus_americanus.LepAme_scaffold_56121                     16465 1 +     24238 C
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331264 1 -   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8903 1 +     19643 A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042564 1 -   6120653 A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079053 1 +  43346337 A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613275 1 +  59628241 A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              43581 1 -     61512 A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371242 1 -  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23497 1 +     30207 A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20600 1 -     24934 A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23449 1 +     30527 A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34638 1 -     50087 A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44409 1 +     51645 A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413578 1 - 187317192 A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397801 1 +  25927173 A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46965 1 -     62418 A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23620 1 +     24253 A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43440 1 +     59329 A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269368 1 +    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20555 1 +     21031 A
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 1152 1 +     17132 A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221871 1 -    270270 A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320652 1 +  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355484 1 -    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672169 1 -    737560 A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219456 1 +    317179 A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499604 1 +  40650429 A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24622 1 -     74585 A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47252 1 -    140813 A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 10 C 0
s Mesocricetus_auratus.KB708134.1                         17427900 1 +  29670104 A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                 8932 1 +     17804 A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9434 1 -     12984 A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17748 1 -     26561 A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983223 1 +  93316391 a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43628 1 +    145209 A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 205
s Micronycteris_hirsuta.MicHir_scaffold_2233                183282 1 +    200668 A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 17
s Microtus_ochrogaster.CM001695.1                         15961020 1 +  27267610 A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361380 1 -   8254450 A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 17
s Miniopterus_schreibersii.MinSch_scaffold_23309             40281 1 -     48117 A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 17
s Mirounga_angustirostris.MirAng_flattened_line_54046         7136 1 +     27589 A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 32
s Mirza_zaza.k141_766280                                     51012 1 -     62432 A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177442 1 +    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 17
s Mungos_mungo.MunMun_flattened_line_18455                   17146 1 -     63510 A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37321 1 +     47283 A
i Murina_feae.MurFea_scaffold_17764                      C 0 I 17
s Mus_caroli.FMAL02030609.1                                   5323 1 +      5579 A
i Mus_caroli.FMAL02030609.1                              C 0 n 0
s Mus_musculus.chr8                                       41686026 1 + 129401213 g
i Mus_musculus.chr8                                      C 0 I 7
s Mus_pahari.LT608297.1                                   58215914 1 +  89631738 A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495346 1 + 130317789 a
i Mus_spretus.CM004101.1                                 C 0 I 7
s Mustela_putorius.JH418006.1                             14353771 1 +  14710649 A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791371 1 +  10118263 a
i Myotis_brandtii.KE162005.1                             C 0 I 17
s Myotis_davidii.KB100139.1                                4385731 1 +   6019432 a
i Myotis_davidii.KB100139.1                              C 0 I 17
s Myotis_lucifugus.GL429869.1                               381553 1 +   4330536 a
i Myotis_lucifugus.GL429869.1                            C 0 I 17
s Myotis_myotis.MyoMyo_scaffold_66571                          380 1 +     18357 A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 17
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118209 1 +    130748 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 11 C 0
s Nasalis_larvatus.k141_1350636                              27331 1 +     34575 A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467732 1 -  31847680 A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 32
s Noctilio_leporinus.NocLep_scaffold_7894                   126237 1 -    149072 A
i Noctilio_leporinus.NocLep_scaffold_7894                I 4 I 16
s Nomascus_annamensis.k141_1771965                           52068 1 -    132029 A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8163 1 -     16345 A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14048 1 +     22201 A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412269 1 -  22158432 A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24446 1 -     54323 A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196876 1 +   9404916 A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93634901 1 + 196305487 A
i Nycticebus_bengalensis.LG01                            I 10 C 0
s Nycticebus_coucang.k141_3846325                             1659 1 -      3937 A
i Nycticebus_coucang.k141_3846325                        I 10 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563140 1 - 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 10 C 0
s Ochotona_princeps.JH802162.1                             2549836 1 -   3988456 A
i Ochotona_princeps.JH802162.1                           I 10 C 0
s Octodon_degus.JH651603.1                                11046104 1 -  11899542 A
i Octodon_degus.JH651603.1                               I 15 C 0
s Odobenus_rosmarus.KB229312.1                             1450328 1 +   2017862 A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91379 1 -    140218 A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    1748 1 -     41509 A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 487
s Orycteropus_afer.OryAfe_flattened_line_171931              12022 1 -     14239 T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102299 1 - 174332312 T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37914 1 +    559221 A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38298 1 -     51505 A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351301 1 +   1103335 a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1471161 1 - 189151597 A
i Pan_troglodytes.CM009242.2                             C 0 I 76
s Panthera_onca.PanOnc_flattened_line_3271                   23075 1 -    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460401 1 -  18783137 a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971121 1 +   8748460 a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   241492 1 - 183742232 A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7956 1 +     21308 A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288995 1 -  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20611 1 -     27687 A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13747 1 +     16796 A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20557 1 -     23640 A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13714 1 +     78924 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24584 1 +     31479 A
i Perodicticus_ibeanus.k141_1921260                      I 4 C 0
s Perodicticus_potto.k141_1854441                            16948 1 -     24908 A
i Perodicticus_potto.k141_1854441                        I 4 C 0
s Peromyscus_maniculatus.KI615324.1                         245460 1 +  18517816 A
i Peromyscus_maniculatus.KI615324.1                      I 5 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30576 1 -     56120 A
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             775 1 +     55023 A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          326 1 -     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             914 1 +     40849 A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252581 1 +  14605196 A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1499 1 +     22231 A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 17
s Pithecia_albicans.k141_1239476                             63530 1 +    207309 A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4624 1 -     25401 A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30365 1 +     58159 A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30641 1 +     63561 A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30404 1 +     51148 A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555371 1 -   4542175 A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30388 1 +     51125 A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6792 1 +     39866 A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1877 1 -      9282 A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41281 1 -     87950 A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41674 1 -     88961 A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6373 1 -     39403 A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41325 1 +     87928 A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6370 1 -     60166 A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13306 1 -     67232 A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41222 1 -     90634 A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42690 1 +     89403 A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176287 1 - 189387572 A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191105 1 -   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25911 1 +     69807 A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43106 1 -     80239 A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8801 1 +     14086 G
i Procavia_capensis.ProCapCap_scaffold_121686            C 0 I 37
s Prolemur_simus.MPIZ01000396.1                            1981237 1 +   4620579 a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564703 1 -   2598838 a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2339 1 -      7103 A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2936 1 -     11706 A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6672 1 -     30655 A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32997 1 +     46564 A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93268 1 -     98465 A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6905 1 +     35169 A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34796 1 +     52041 a
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50324 1 -     66298 a
i Pteronotus_parnellii.KE847780.1                        C 0 I 17
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3336 1 -     18639 A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839558 1 -  28871421 A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536067 1 -   4952924 A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097715 1 +  38429054 a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25286 1 +     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151779 1 -   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6156 1 +     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021270 1 -  90668790 A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_221883                            27096 1 +     27361 A
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120463 1 + 195417433 A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234704 1 -   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73480 1 -    116970 A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2671 1 +     27962 A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2566 1 +      6077 A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2658 1 +      5971 A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2600 1 +      5932 A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               923 1 -      4390 A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390355 1 - 209938924 A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2548 1 +      5979 A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3289 1 -      4301 A
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Sapajus_apella.ctg103                                     236953 1 +   5703754 A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6543 1 +     21866 A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114649 1 +    313613 A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23603 1 +     27374 A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27122 1 +     58920 A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13618 1 -     45317 A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21276 1 -     42441 A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23956 1 -     29113 A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27025 1 -     48123 A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47680 1 +     77746 A
i Sigmodon_hispidus.SigHis_scaffold_20193                I 415 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856975 1 -   1910179 A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1866962 1 +   3870691 A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5121 1 -     97271 A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123553 1 +    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389528 1 +   1523678 A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12305 1 +     22964 A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 17
s Tamandua_tetradactyla.TamTet_scaffold_224794                1325 1 +      5583 A
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 11 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190239 1 +    199430 A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104190 1 -    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5540 1 +      6850 A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5588 1 +     20590 A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351478 1 - 186847797 A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22901 1 -     33621 A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 21 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18469 1 -     31044 A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478348 1 -    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 17
s Trachypithecus_auratus.k141_1189070                        19167 1 +     26378 A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31831 1 -     78344 A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18488 1 +     25722 A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26782 1 -     62838 A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26830 1 +     46913 A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7636 1 -     28527 A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28721 1 -     64340 A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26758 1 -     63452 A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8201 1 +     22490 A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1629 1 -      6147 A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8534 1 -     13050 A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253773 1 -   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59524 1 +     59866 A
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     851 1 -     21056 A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180488 1 +   5085361 A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  23881 1 -     30710 A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22788 1 -    147434 A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103636 1 -    112863 A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172740 1 -    224448 A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27526 1 -     86975 A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2047 1 +      2695 A
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 6
e Perognathus_longimembris.PerPac_flattened_line_89005         279 9 +      9367 I
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       6822 0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832508 0 -   4065304 C
e Vicugna_pacos.KN270157.1                                   75090 0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081 0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884 0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468 0 +     16473 C
e Rhinolophus_sinicus.LVEH01000134.1                       2913452 0 +   3329780 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 0 +     55069 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214 0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130 0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394 0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875 0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272 0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894 0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002 0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             81390 0 -     86153 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907 0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833 0 +    437263 C
e Miopithecus_ogouensis.k141_1534655                         20667 0 -     27822 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944 0 +     93471 C
e Megaderma_lyra.MegLyr_scaffold_4542                       149035 0 +    207569 C
e Lipotes_vexillifer.KE559953.1                             333400 0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877 0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_galeritus.HipGal_scaffold_23202               49436 0 +     49977 C
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 0 -     36432 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641 0 -    133382 C
e Equus_przewalskii.KK951119.1                              410751 0 -    498745 C
e Equus_caballus.CM000403.2                               21373965 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041 0 -   4378816 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090 0 -  35494412 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          1451 0 -      8242 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20449 0 -     39886 C
e Capra_hircus.CM004588.1                                 26589921 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559 0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852 0 +  48749331 C
e Bison_bison.KN261452.1                                     20465 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762 0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036 0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937 0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3807 76 +     36723 GATCG---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTAATATA-AA-A
s Acinonyx_jubatus.LLWD01001279.1                           811455 81 +   1699592 gatca---ttt-a-ttcattaaatttgaC-AGGAATT----------------------T----------A-TAAG-GC-ATC---T-TTCAT-A----TCA--TG--TTGTC---ATGA----CCAT---TG-GCTCATATA-AG-A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 3
s Acomys_cahirinus.AcoCah_scaffold_21377                     18682 49 +     63021 GGACA---TTT-A-TT---TTCAC------------TTGACAATAAT-----------TT----------A-TA-A-AT-AT----T-TTAAC-A----TCA--TG------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20413983 80 +  29979442 GAtca---ctc-a-ttcatttcatttgaC-AAGAATT----------------------T----------A-TAAA-GC-ATC---T-TTCAT-A----TCA--TG--T-GCC---ATAA----CCTT---GG-ATTCATATA-AA-A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 3
s Ailurus_fulgens.LNAC01001112.1                            214081 80 +    347723 gacca---ttt-a-ttcatttcatttgac-AAGAATT----------------------T----------A-TAGA-GC-ATC---T-TTCAT-A----TCA--TG--T-GGC---ATAA----TCAT---GG-ATTCatata-aa-a
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 3
s Allactaga_bullata.AllBul_scaffold_20030                    16617 58 -     61208 -------------------TTTAT------------TTGAAAGTGAT-----------TT----------A-TA-A-AC-ATT---T-TTAGC-A----TCA--TG--T-GCC---ACAA----TCAT---AG-GCTGA---------
i Allactaga_bullata.AllBul_scaffold_20030                I 6 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46133 76 +     53615 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42077 76 +     44087 GACCA---TTT-A-TTCAATTTAC------------TTGACCAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14715 76 -     21945 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16387 76 +     32033 GACCA---TTT-A-TTCATTTTAC------------TTGACCAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70840 76 -     84148 TACCA---TTT-A-TTTATTTTAC------------TTGAAAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TATAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43073 76 -     78289 TACCA---TTT-A-TTTATTTTAC------------TTGAAAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TATAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42519 76 +     55831 TACCA---TTT-A-TTTATTTTAC------------TTGAAAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TATAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                40960 76 -     64179 TACCA---TTT-A-TTTATTTTAC------------TTGAAAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TATAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22607 76 -     24835 TACCA---TTT-A-TTTATTTTAC------------TTGAAAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TATAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39590 76 +     45454 TACCA---TTT-A-TTTATTTTAC------------TTGAAAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TATAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45288 76 +     70886 TACCA---TTT-A-TTTATTTTAC------------TTGAAAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TATAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7413 76 +     30854 TATCA---TTT-A-TTTATTTTAC------------TTGAAAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TATAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31552 76 +     42133 TACCA---TTT-A-TTTATTTTAC------------TTGAAAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TATAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175328 38 -    412891 --------------------------------------------------------------------------------ATC---T-TTAAT-A----TCA--TG--T-GCC---ATAG----CCAT---GG-ACTGATATA-----
i Anoura_caudifer.AnoCau_scaffold_1412                   I 17 C 0
s Aotus_azarae.k141_118258                                   49340 76 -     65372 TACCA---TTT-A-TTTATCTTAC------------TTGACAAGAAT-----------TT----------A-CA-C-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATG-AA-A
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43094 76 +     43593 TACCA---TTT-A-TTTATCTTAC------------TTGACAAGAAT-----------TT----------A-CA-C-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATG-AA-A
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671107 76 +   5030052 tacca---ttt-a-tttatcttaC------------TTGACAAGAAT-----------TT----------A-CA-C-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGAtatg-aa-a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22749 76 -     23494 TACCA---TTT-A-TTTATCTTAC------------TTGACAAGAAT-----------TT----------A-CA-C-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATG-AA-A
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7885 76 +      8415 TACCA---TTT-A-TTTATCTTAC------------TTGACAAGAAT-----------TT----------A-CA-C-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATG-AA-A
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14643 68 -     32367 GACCA---TTT-A-TTCATTTTAC------------TTGGCAGGAAT-----------TT----------A-CA-A-AC-ACC---T-TTAAT-A----T--TGTG--T-GTC---TCCA----GCAT---GG-A-------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3618 41 -     15198 --------------------------------------------------------------------------------ATC---T-TTAAT-A----TCA--TG--T-GCTTTAATAG----CCAT---GG-ACTGATATA-----
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 17 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273352 76 +  21539123 TACCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-GC-GTC---T-TATAT-G----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9518 76 +     48076 TATCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-GC-GTC---T-TATAT-G----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4655 76 -     28759 TATCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-GC-GTC---T-TATAT-G----T-----G--T-GCC---ACAG----CCAT---GG-ACTGATATA-AA-A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32209 76 +     44353 TACCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-GC-GTC---T-TATAT-G----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47579 76 -     71267 TATCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-GC-GTC---T-TATAT-G----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21639 76 -     33135 TACCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-GC-GTC---T-TATAT-G----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4820 76 +     11645 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTAAT-A----G-----A--T-GCC---ATAA----CCAT---AG-ACTGATATA-AA-A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4826 76 -     19611 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTAAT-A----G-----A--T-GCC---ATAA----CCAT---AG-ACTGATATA-AA-A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6544 76 +     28062 TGCCA---TTT-A-TTTATTTCAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GTC---ACAA----CCAT---AG-ACTGATGTA-AA-A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41838 76 -     91139 TGCCA---TTT-A-TTTATTTCAC------------TTGACAAGAGT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GTC---ACAA----CCAT---AG-ACTGATGTA-AA-A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19364 76 +     95584 TGCCA---TTT-A-TTTATTTCAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GTC---ACAA----CCAT---AG-ACTGATGTA-AA-A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19277 76 +    119600 TGCCA---TTT-A-TTTATTTCAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GTC---ACAA----CCAT---AG-ACTGATGTA-AA-A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8823 76 +     18648 TACCG---TTT-A-TTTATCTTGC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8361 76 -     13885 TACCG---TTT-A-TTTATCTTGC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             429 76 -      8861 TACCG---TTT-A-TTTATCTTGC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452822 76 + 189096842 TACCG---TTT-A-TTTATCTTGC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                345 76 +      8664 TACCG---TTT-A-TTTATCTTGC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42504007 80 +  60362399 GACCA---CTT-A-CTCATTTCACTTAAC-AAGAATT----------------------T----------A-TAAA-GC-ATC---T-TTCAT-A----TCA--TA--T-ACC---ATTA----CCAT---GG-ACTCATATA-AA-A
i CanFam4.chr16                                          C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7643 80 -     23171 GACCA---CTT-A-CTCATTTCACTTAAC-AAGAATT----------------------T----------A-TAAA-GC-ATC---T-TTCAT-A----TCA--TA--T-ACC---ATTA----CCAT---GG-ACTCATATA-AA-A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 3
s Canis_lupus_dingo.QKWQ01000480.1                          220986 80 +   9314153 GACCA---CTT-A-CTCATTTCACTTAAC-AAGAATT----------------------T----------A-TAAA-GC-ATC---T-TTCAT-A----TCA--TA--T-ACC---ATTA----CCAT---GG-ACtcatata-aa-a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 3
s Canis_lupus_familiaris.chr16                            41614121 80 +  59632846 GACCA---CTT-A-CTCATTTCACTTAAC-AAGAATT----------------------T----------A-TAAA-GC-ATC---T-TTCAT-A----TCA--TA--T-ACC---ATTA----CCAT---GG-ACtcatata-aa-a
i Canis_lupus_familiaris.chr16                           C 0 I 3
s Canis_lupus_orion.HG994398.1                            45105702 80 -  63665305 GACCA---CTT-A-CTCATTTCACTTAAC-AAGAATT----------------------T----------A-TAAA-GC-ATC---T-TTCAT-A----TCA--TA--T-ACC---ATTA----CCAT---GG-ACtcatata-aa-a
i Canis_lupus_orion.HG994398.1                           C 0 I 3
s Carlito_syrichta.NW_007259797.1                           268909 76 +    496798 Gacca---tgt-a-tttattttac------------ttgataGGGAT-----------GT----------A-TG-A-AC-ATC---T-CTAAT-A----T-----G--T-GTC---ATAA----CCAC---GG-actgatata-aa-a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3910 38 +      5315 --------------------------------------------------------------------------------ATC---T-TTAAT-A----TCA--TG--C-GCC---ATAG----TCAT---GG-ACTGATATA-----
i Carollia_perspicillata.CarPer_scaffold_170178          I 17 C 0
s Cavia_aperea.AVPZ01000300.1                              4994572 74 +  23392119 Gacca---ttt-a-ttcattttac------------tggacaagaat-----------tt----------a-ta-a-at-att---c-ttaat-A----TCA--TG--T-GTC---CCAG----CAGT---AG-attgata-------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 2
s Cavia_porcellus.DS562891.1                               4998014 74 +  23407841 Gacca---ttt-a-ttcattttac------------tggacaagaat-----------tt----------a-ta-a-at-att---c-ttaat-A----TCA--TG--T-GTT---CCAG----CAGT---AG-attgata-------
i Cavia_porcellus.DS562891.1                             C 0 I 2
s Cavia_tschudii.CavTsc_scaffold_23560                       61115 74 -     66877 GACCA---TTT-A-TTCATTTTAC------------TGGACAAGAAT-----------TT----------A-TA-A-AT-ATT---C-TTAAT-A----TCA--TG--T-GTT---CCAG----CAGT---AG-ATTGATA-------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 2
s Cebuella_niveiventris.k141_592277                           3742 76 -     12580 TACCG---TTT-A-TTTATCTTGC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41797 76 +     53515 TACCG---TTT-A-TTTATCTTGC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369735 76 -  26074798 TACCA---TTT-A-TTTATCTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAG----CCAT---GG-ACTGATATA-AA-A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6624 76 -     34880 TACCA---TTT-A-TTTATCTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAG----CCAT---GG-ACTGATATA-AA-A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65719 76 -     89041 TACCA---TTT-A-TTTATCTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAG----CCAT---GG-ACTGATATA-AA-A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          832 76 -      5494 GACCA---TGT-A-TTTATTTTAC------------TTGATAGGGAT-----------GT----------A-TG-A-AC-ATC---T-CTAAT-A----T-----G--T-GTC---ATAA----CCAC---GA-ACTGATATA-AA-A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490788 79 -  27778364 gacca---ttt-a-ttcatttcac------------t----------tgacaaaaatt-t----------a-taaa-gc-atC---T-TTAAT-A----T-A--TG--T-GCT---GTAA----CCAT---GG-ACTAATATA-AA-A
i Ceratotherium_simum.JH767749.1                         C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17621 79 +     27315 GACCA---TTT-A-TTCATTTCAC------------T----------TGACAAAAATT-T----------A-TAAA-GC-ATC---T-TTAAT-A----T-A--TG--T-GCT---GTAA----CCAT---GG-ACTAATATA-AA-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 4
s Cercocebus_atys.KQ010504.1                                139312 76 -   4669795 gacca---ttt-a-ttcattttac------------ttgaCAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43052 76 +     47900 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42885 76 -     44860 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42868 76 -    148725 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10125 76 -     17524 GACCA---TTT-A-TTCATTTCAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25847 76 -     34525 GACCA---TTT-A-TTCATTTCAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30323 76 -     45857 GACCA---TTT-A-TTCATTTCAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23816 76 +     70610 GACCA---TTT-A-TTCATTTCAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20741 76 +     36323 GACCA---TTT-A-TTCATTTCAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11436 79 -     19938 GATCA---TTT-A-TTCATTTCAT------------TTGACAAGAAC-----------TT----------C-TACG-GC-ATC---TATTTAT-A----TCA--TG--T-GCA---TGAG----CCAT---GG-ACTGATATA-A---
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 19
s Cheirogaleus_major.k141_666340                             29251 75 -     33796 GATCA---TTT-A-TTCATTTTAC-------------TGACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTAAC-A----G-----A--T-GCC---ATAA----CCAT---GG-ACTGATACA-AA-A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3767 76 -     15404 GATCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-GTA---T-TTAAC-A----G-----A--T-GCC---ATAA----CCAT---GG-ACTGATATA-AA-A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7625 76 -     32913 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TC----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---AG-ACTGATATG-AA-A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18038 76 -     40346 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TC----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---AG-ACTGATATG-AA-A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18293 76 +    216457 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TC----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---AG-ACTGATATG-AA-A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18086 76 +     39636 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TC----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---AG-ACTGATATG-AA-A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2674 73 +      5346 TACCA---TTT-A-TTTATCTTGC------------TTGACAA---T-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41173 76 -    112038 TGCCA---TTT-A-TTTATTTCAC------------TTGACAAGAAT-----------TT----------A-CG-A-AC-ATC---T-TCAAT-A----T-----G--T-GCT---ACAA----CCAT---AG-ACTGATGTG-AA-A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6745 76 +     34062 TGCCA---TTT-A-TTTATTTCAC------------TTGACAAGAAT-----------TT----------A-CG-A-AC-ATC---T-TCAAT-A----T-----G--T-GCT---ACAA----CCAT---AG-ACTGATGTG-AA-A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341638 76 +  18827391 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8183 76 -     44032 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            302963 76 - 135778131 gacca---ttt-a-ttcattttac------------ttgaCAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10476 79 +     15858 GATCA---TTT-A-TTCATTTCAC------------TTGACAATAAC-----------TT----------A-TATA-GC-ATC---CATTTAT-A----TC--GTG--T-GCA---TGAA----GCAT---AG-ACTGATATA-A---
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            602052 79 -    839153 GATCG---TTT-A-TTCATTTCAC------------TTGACAATAAC-----------TT----------A-TATA-GC-ATC---CATTTAT-A----TC--GTG--T-GCA---TGAA----GCAT---AG-ACTGATATA-A---
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407404 76 -   2368649 gacca---ttt-a-ttcattttac------------ttgaCAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377282 76 - 200372422 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                829 76 -     84244 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805861 78 +  53390261 GACCC---Ttt-a-ttaatttcac------------t----------------------ttatatGAATGA-TA-G-AC-ATC---T-TTAAT-A----TCA--TG--T-GCC---ATAA----ATGT---GA-ACTAATTTA-CA-A
i Condylura_cristata.JH655891.1                          C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1451 71 -      8242 --------TTT-A-CTTGTATCGC------------T----------------------TGGCAAGAATTA-TAAA-GA-ATC---T-TTAAT-A----ACA--TG--T-CTC---CTAA----TCAT---GG-ACTGATATA-----
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40867 65 -     83289 GACCA---CTG-A-TC--TTTTAC------------TTGACAATAAT-----------TT----------A-TA-C-AC-AT----T-TTAGC-A----T-A-TTG--T-GCC---AC--------AT---AA-GTTGA---------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 10
s Cricetulus_griseus.LT883664.1                          213113352 32 - 224834208 Gacca---ttt-a-tt---tttac------------ttgacagtaat-----------tt----------a-ta--------------------------------------------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 40
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2908 81 +     87169 GACCA---TTT-A-TTCATTTCATTTGAC-AAGAATT----------------------T----------A-TAAG-GC-ATC---T-TTCAT-A----TCA--TG--TTGCC---ATAA----CTAT---TG-ACTCATGTA-AA-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 3
s Ctenodactylus_gundi.CteGun_scaffold_65                    643386 74 -   1526836 GACAA---CTC-A-TTCGTTTCCC------------TTAACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTAAT-A----TCAC--A--T-GCT---ACAT----GTAT---GA-ACTGATA-------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3585 70 +     50838 GACAA---CTT-A-TTTATTTTTC------------TTAAAA----A-----------TT----------T-TT-A-AT-GTA---T-TTCAT-G----ACA--TG--T-GCC---TCAG----TAGT---GG-ACTGATA-------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 2
s Cuniculus_paca.CunPac_flattened_line_7025                   2497 74 +     36344 GACCA---TTT-A-TTCATTTTAT------------TTGATAATACT-----------TT----------A-TA-A-AT-ATT---T-TTAAT-A----TCA--TG--T-GTC---CCAG----CAGT---AG-ACTGACA-------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 7
s Dasyprocta_punctata.DasPun_flattened_line_15900            26254 74 +     75252 GACGA---TTT-A-TTCATTCTGC------------TTGACAAGAAT-----------TT----------A-GA-A-AT-ACT---T-TCAAT-A----TCA--TG--T-TTC---CCAG----CAGT---AG-ACTGATA-------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 2
s Dasypus_novemcinctus.JH564415.1                          2108778 79 -   2246927 GATCA---TTT-A-CTCATTTCAT------------TTGACAACACC-----------TT----------C-TATG-GC-ATC---TGTTAAT-A----TCA--TG--T-GCA---GGAA----CCGT---GG-ACtgatata-a---
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291192 76 +  12879189 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-TA-A-AT-ATC---T-TTAAT-G----T-----G--T-GCC---ATAA----CCAT---AG-ACTGATATA-AA-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863359 38 -  20541912 --------------------------------------------------------------------------------atc---t-TTAAT-A----TCA--TG--T-GCC---ATAG----CCTT---GG-ACTGGTATA-----
i Desmodus_rotundus.KZ672289.1                           I 17 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663078 80 -   1390856 GACCA---TTT-A-TTCATTTCAC------------T----------TGACAAAAATT-T----------A-TAAA-GC-ATC---T-TTAAT-A----TCA--TG--T-GCT---GTAA----CCAT---GG-ACtaatata-aa-a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 4
s Diceros_bicornis.DicBicMic_scaffold_5955                  137865 79 -    198055 GACCA---TTT-A-TTCATTTCAC------------T----------TGACAAAAATT-T----------A-TAAA-GC-ATC---T-TTAAT-A----T-A--TG--T-GCT---GTAA----CCAT---GG-ACTAATATA-AA-A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 4
s Dinomys_branickii.DinBra_scaffold_10381                    97069 74 -    115145 GACCA---TTT-A-TTCATTTTAC------------TTGACAACAAT-----------TT----------A-TA-A-AT-ATC---T-TTAAT-A----TC--GTG--T-GCC---CCAG----CAGT---GG-ACTGATA-------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 2
s Dipodomys_ordii.KN672350.1                              18948933 72 -  37912305 GAAGA---TTC-A-TTCATTTAAC------------TTGACAATAAT-----------TT----------A-TA-T-GC-AGC---T-TGACT-A----TCA--TG--C-ATA---ACAA----CCAT---G--GCTTAT--------
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3880 72 -     10735 GAAGA---TTC-A-TTCATTTAAC------------TTGACAATAAT-----------TT----------A-TA-T-GC-AGC---T-TGACT-A----TCA--TG--C-ATA---ACAA----CCAT---G--GCTTAT--------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8529 74 +     14636 GACCA---TTT-A-TTCATTTTAC------------TGGACAAGAAT-----------TT----------A-TA-A-CT-ATT---T-TTAAT-A----TCA--TG--T-GTT---CCAG----CAGT---AG-ACTGATA-------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 2
s Echinops_telfairi.JH980293.1                            62852742 36 - 111700974 ----------------------------------------------------------------------------------------CTACT-A----TCA--TG--T-GCC---AG-T----CCAT---GA-ACTGATATA-AA-A
i Echinops_telfairi.JH980293.1                           I 203 I 224
s Eidolon_helvum.AWHC01266696.1                               4909 76 +     19438 gacca---ttt-a-ttcattttac------------t----------------------tgacaagaattt-taaa-gc-atc---t-TTAAT-A----C-A-ATG--T-GCC---ATAA----CCAT---GG-ACTGATATA-----
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9106073 81 -  10337057 GTCTA---CTT-A-TTAATTTCAT------------TTGCTAAGAAT-----------TT----------A-CAAA-GC-AAC---T-TTAAT-G----TCA--TG--T-GCC---AGAA----ATAT---GC-ACAGCTGTa-gaca
i Elephantulus_edwardii.JH947257.1                       C 0 I 872
s Ellobius_lutescens.LOEQ01008920.1                          29609 68 +    110024 Gagca---ttt-a-tt---tttgc------------ttgacaataat-----------tt----------a-ta-a-at-at----t-ttaac-a----t--tgtG--T-GCC---AC--AACC--AT---AA-GTTGA---------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11584 68 +     18970 gacca---ttt-a-tt---tttac------------ttgacaataat-----------tc----------a-ta-a-at-at----t-ttaac-a----t--tgtg--T-GCC---AC--AACC--AT---AA-GTTGA---------
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914736 80 +  41312741 gacca---ttt-a-ttcatttcatttgac-aagAATT----------------------T----------A-TAAA-GC-ATC---T-TTCAT-A----TCA--TA--T-GCC---CTAA----CTAT---GG-ATTTATATA-AA-A
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Eptesicus_fuscus.JH977646.1                             12576992 38 +  14770903 --------------------------------------------------------------------------------atc---t-ttagT-A----TCA--TG--T-GCT---ATAA----ACAT---GG-ACTGATATA-----
i Eptesicus_fuscus.JH977646.1                            I 17 C 0
s Erythrocebus_patas.Contig38                               261161 76 +  21539334 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13364 76 -     24895 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41073 76 -     70999 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85035 76 +    112731 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41608 76 +     68309 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 51930 76 -     65740 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22563 76 -     75513 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46756 76 -     97555 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3482 76 +     30972 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41203 76 -     52037 GACCA---TTT-G-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57607 76 -    111500 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245368 81 - 206538554 gatca---ttt-a-ttcattaaatttgaC-AGGAATT----------------------T----------A-TAAG-GC-ATC---T-TTCAT-A----TCA--TG--TTGTC---ATGA----CCAT---TG-GCTCATata-aa-a
i Felis_catus.CM001381.2                                 C 0 I 3
s Felis_catus_fca126.CM031415.1                          185115153 81 - 205367284 gatca---ttt-a-ttcattaaatttgaC-AGGAATT----------------------T----------A-TAAG-GC-ATC---T-TTCAT-A----TCA--TG--TTGTC---ATGA----CCAT---TG-GCTCATata-aa-a
i Felis_catus_fca126.CM031415.1                          C 0 I 3
s Felis_nigripes.FelNig_flattened_line_31944                 26255 81 -     30238 GATCA---TTT-A-TTCATTAAATTTGAC-AGGAATT----------------------T----------A-TAAG-CC-ATC---T-TTCAT-A----TCA--TG--TTGTC---ATGA----CCAT---TG-GCTCATATA-AA-A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 3
s Galago_moholi.ctg3793                                     123146 76 -    137831 GACCA---TTT-A-TTCATTTTAC------------TTCACAATAAT-----------TT----------A-TA-A-AT-ATC---T-TTAAT-G----T-----G--T-GAC---ATCA----CCAC---GA-ACTGTTCTA-AA-A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6691 76 +     22493 GACCA---TTT-A-TTCATTTTAC------------TTCACAATAAT-----------TT----------A-TA-A-AT-ATC---T-TTAAT-G----T-----G--T-GAC---ATCA----CCAC---GA-ACTGTTCTA-AA-A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18742 76 -     32986 GGCCA---TTT-A-TTCATTTTAC------------TTCACAGTAAT-----------TT----------A-TA-A-AT-ATC---T-TTAAT-G----T-----G--T-GAC---ATCA----CCAT---GA-ACTGTTCTA-AA-A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17680 77 +     18121 GACCA---TTT-G-TTCATTTTAC------------TTGACAAGAAA-----------TT----------A-TG-A-AC-ATC---T-TTAAT-A----TCA--TG--T-GCC---ATAA----CCAC---AG-GGTGATATG-A---
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32807 77 -     36801 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTAA--A----TC-C-TG--T-GTC---TCAA----CCAT---GA-ACTGATATA-AA--
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4146 76 -      8343 GATCG---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTAATATA-AA-A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 69617 76 +  33314783 GATCG---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-actaatata-aa-a
i Gorilla_gorilla.LT578336.1                             I 482 I 62
s Graphiurus_murinus.GraMur_scaffold_10447                     305 79 -     78134 GATCA---ATT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-ACC---T-TTGAT-A----TC-C-TG--T-GCC---TCAA----CCAT---GA-ACTGATATA-AA-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13291 76 -     40692 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34692 76 +     49394 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59561 76 -     66874 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8434 76 -     42923 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15434 76 -     53142 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29394 81 -    327341 GACCA---TTT-A-TTCATTTCATTTGACGAG-AATT----------------------C----------A-TAAG-GC-ATC---T-TTCAT-A----TCA--TA--TTGCA---ATAA----GCCT---TG-ACTCATGTA-AA-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 3
s Heterocephalus_glaber.JH602082.1                         1925664 53 -  22651954 gacca---ttt-a-ttcatttagc------------ttGACAAGAAT-----------TT----------A-CA-A-AT-ATC---T-TTAAT-A----TTA--TG------------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 40
s Heterohyrax_brucei.HetBruBak_scaffold_99956                11669 46 +     12639 -----------------------------------------------------------------------------GC-ATCTGTT-TTTAA-G----CCA--TG--T-TCT---GGAA----CCAC---GG-ACTGAAAGG-AA-A
i Heterohyrax_brucei.HetBruBak_scaffold_99956            I 37 N 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49436 71 +     49977 --------TGT-A-TTCATTTAAC------------T----------------------TGACAAGAATGA-TAAG-AT-ATC---T-TTAAT-A----G--TGTG--A-GCC---ATAA----CCAC---AG-ACAGGTACA-----
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141146 76 -    630532 GACCG---TTT-A-TTAGTTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTAATATA-AA-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68087 81 +     83186 GGCCA---TTT-C-TTTATTTCATTTGAC-AAGAATT----------------------T----------G-TAAG-GC-ATC---T-TTCAT-A----TCA--TG--CTGCC---ATAA----TCAT---TG-ACTCATGTA-AA-A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 3
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            69954 74 +    143317 GACCA---TTT-A-TTCATTTTAC------------TGGACAAGAAT-----------TT----------A-TA-A-AT-GTT---T-TTAAT-A----TCA--TG--T-GTC---CCAG----CAGT---AG-ACTGATA-------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 2
s Hylobates_agilis.k141_1155965                               4180 76 +     12352 GACCG---TTT-A-TTCGTTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTAATATA-AA-A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11363 76 +     55766 GACCG---TTT-A-TTCGTTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTAATATA-AA-A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2050959 76 + 191637585 GACCG---TTT-A-TTCGTTTTAC------------TTGACGAGAAT-----------TT----------A-CA-A-AC-ATC---T-TAAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTAATATA-AA-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799837 76 +  11177569 GACCG---TTT-A-TTCGTTTTAC------------TTGACGAGAAT-----------TT----------A-CA-A-AC-ATC---T-TAAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTAATATA-AA-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385381 56 +   7955117 gacca---ttt-a-ttcattttac------------tagGCAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----TC--GTG--T-GC------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 16
s Indri_indri.k141_2415743                                     943 76 +     11955 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTAAT-A----G-----A--T-GCC---ATAA----CCAT---GG-ACTGATATA-AA-A
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237801 58 +   9596543 -------------------TTTAC------------TTGAAAAcgat-----------tt----------a-ta-a-ac-att---t-ttaac-g----TCA--TG--T-GCC---ACAA----TCAT---AG-GCTGA---------
i Jaculus_jaculus.JH725527.1                             I 6 C 0
s Lagothrix_lagothricha.k141_246028                          41894 76 +    110728 TACCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TATAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGataca-aa-a
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60458 38 -     65777 --------------------------------------------------------------------------------ATC---T-TTAGA-A----TCA--TG--T-GCT---GTAA----ATAT---GG-CCTGATATA-----
i Lasiurus_borealis.LasBor_scaffold_16567                I 17 C 0
s Lemur_catta.scaffold_24                                 14758083 76 +  30322482 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CTGT---GG-ACTGATATA-AA-A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2810 73 -     13097 TACCA---TTT-A-TTTATCTTGC------------TTGACAA---T-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2565 73 +      5940 TACCA---TTT-A-TTTATCTTGC------------TTGACAA---T-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2395 73 -      5717 TACCA---TTT-A-TTTATCTTGC------------TTGACAA---T-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8759 76 -     11567 TACCA---TTT-A-TTTATCTTGC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10140 76 -     12945 TACCA---TTT-A-TTTATCTTGC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7612 76 +     29618 GACCA---TTT-A-TTCATTTCAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTATT-A----G-----A--T-GCT---GTAA----CCAT---GG-ACTGATATA-AA-A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7609 76 +     31569 GACCA---TTT-A-TTCATTTCAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTATT-A----G-----A--T-GCT---GTAA----CCAT---GG-ACTGATATA-AA-A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7620 76 +     24756 GACCA---TTT-A-TTCATTTCAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTATT-A----G-----A--T-GCC---GTAA----CCAT---GG-ACTGATATA-AA-A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7618 76 +     16388 GACCA---TTT-A-TTCATTTCAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTATT-A----G-----A--T-GCT---GTAA----CCAT---GG-ACTGATATA-AA-A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812162 47 -   3914936 ------------------------------------------------------------------------TAAA-GC-ATC---T-TTCAT-A----TCA--TG--T-GCC---ATAA----CCAT---GG-ATTCATATA-AA-A
i Leptonychotes_weddellii.KB714746.1                     I 32 I 3
s Lepus_americanus.LepAme_scaffold_56121                     16466 79 +     24238 AAACA---TCT-A-TTCACTTTAC------------TTGAGAAGAAT-----------TT----------A-TA-A-AC-ATA---C-CTAAG-A----TCA--TG--T-ATC---ATAA----CCAT---GG-GCTGATATA-AA-A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               331265 76 -   1826925 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8904 76 +     19643 GACTG---TTT-A-TTCATTTTAC------------TTCACAGTAAT-----------TT----------A-TA-A-AT-ATC---T-TTAAT-G----T-----G--T-GAC---ATTA----TCAT---GA-ACTGTTCCA-AG-A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042565 76 -   6120653 GACTG---TTT-A-TTCATTTTAC------------TTCACAGTAAT-----------TT----------A-TA-A-AT-ATC---T-TTAAT-G----T-----G--T-GAC---ATTA----TCAT---GA-ACTGTTCCA-AG-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079054 81 +  43346337 GTCTA---CAT-G-TTCATTTTAT------------TTAACAAGAAC-----------TT----------A-TAAAAGC-ACC---T-TTAAC-A----C-A-ATG--T-ACC---AGAG----CCAT---GG-Acagatgta-aa-a
i Loxodonta_africana.GL010049.1                          C 0 I 568
s Lycaon_pictus.CM007581.1                                41613276 80 +  59628241 GACCA---CTT-A-CTCATTTCACTTAAC-AAGAATT----------------------T----------A-TAAA-GC-ATC---T-TTCAT-A----TCA--TA--T-ACC---ATTA----CCAT---GG-Actcatata-aa-a
i Lycaon_pictus.CM007581.1                               C 0 I 3
s Macaca_arctoides.k141_1757516                              43582 76 -     61512 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371243 76 -  60120075 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23498 76 +     30207 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20601 76 -     24934 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23450 76 +     30527 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34639 76 -     50087 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44410 76 +     51645 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413579 76 - 187317192 gacca---ttt-a-ttcattttac------------ttgaCAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397802 76 +  25927173 gacca---ttt-a-ttcattttac------------ttgaCAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  46966 76 -     62418 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23621 76 +     24253 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43441 76 +     59329 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269369 76 +    668171 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20556 76 +     21031 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 1153 76 +     17132 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----TCAT---GG-ACTGATATA-AA-G
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221872 76 -    270270 GACCA---TTT-A-TTCATTTTAT------------T----------------------TGACAAGATTTT-TAAA-GC-ATC---T-TTAAT-A----CCA--TG--T-GCC---ATAA----TCAT---GG-ACTGATATA-----
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320653 76 +  24302211 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATACA-AA-G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355485 76 -    752769 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATACA-AA-G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672170 80 -    737560 GCCCA---CTTAA-TTCATTTCACTAAAC-AAGAATT----------------------T----------A-TAAA-GA-ATC---T-TTAAT-A----TCA--TG--T-GCC---ATA-----CCAC---AG-ACTggagta-aa-a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219457 80 +    317179 GCCCA---CTTAA-TTCATTTCACTAGAC-AAGAATT----------------------T----------A-TAAA-GA-ATC---T-TTAAT-A----TCA--TG--T-GCC---ATA-----CCAC---AG-ACTgaagta-aa-a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499605 56 +  40650429 gacca---ttt-a-ttcattttac------------tagGCAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----TC--GTG--T-GC------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 16
s Megaderma_lyra.MegLyr_scaffold_4542                       149035 47 +    207569 --------TTT-A-TTCATTTCAC------------T----------------------TGACAAGAATTA-TAAA-GC-ATC---T--TAAC-A----GCA--TA------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 22
s Mellivora_capensis.MelCap_flattened_line_19308             24623 80 -     74585 GACCA---TTT-A-TTCATTTCATTGGAC-AAGAATT----------------------T----------A-TAAA-GC-ATC---T-TTCAT-A----TTA--TA--T-GCC---CTAA----CCGT---GG-ATTCATATA-AA-A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 15
s Meriones_unguiculatus.MerUng_scaffold_7390                 47253 46 -    140813 GACCA---TTT-A-TT---AT---------------TTGACAATCAT-----------TT----------A-TA-C-AT-AT----T-TTAAC-A----TCA--TG------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17427901 68 +  29670104 Gacca---ttt-a-tt---tttac------------ttgacagtaat-----------tt----------a-ta-a-at-at----t-ttagc-a----t-A-GTA--T-GCT---AT--AACC--AT---AA-GCTAA---------
i Mesocricetus_auratus.KB708134.1                        C 0 I 5
s Mico_argentatus.k141_582562                                 8933 76 +     17804 TACCG---TTT-A-TTTATCTTGC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9435 76 -     12984 TACCG---TTT-A-TTTATCTTGC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17749 76 -     26561 TACTG---TTT-A-TTTATCTTGC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983224 76 +  93316391 gatca---ttt-a-ttcattttac------------ttgaCAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTAAT-A----G-----A--T-GCC---ATAA----CCAC---GG-ACTGATGTA-AA-A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    43834 40 +    145209 ----------------------------------------------------------------------------------------TTACT-ATCGATCA--TG--T-GCC---AG-A----ACAT---GA-ACTGATATC-AA-A
i Microgale_talazaci.MicTal_scaffold_6613                I 205 I 223
s Micronycteris_hirsuta.MicHir_scaffold_2233                183300 38 +    200668 --------------------------------------------------------------------------------ATC---T-TTAAT-A----TCA--TG--T-GCC---ATAG----CCAT---GG-ACTGATATA-----
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 17 C 0
s Microtus_ochrogaster.CM001695.1                         15961021 68 +  27267610 gacca---ttt-a-tt---tttac------------ttgacaataat-----------tt----------a-ta-a-at-at----t-ttaac-a----t--tgtg--T-GCC---AC--ACCC--AT---AA-GTTGA---------
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361398 38 -   8254450 --------------------------------------------------------------------------------ATC---T-TTAAT-A----TCA--TG--T-GCT---ATAA----CCAT---GG-ACTGATGTA-----
i Miniopterus_natalensis.LDJU01000034.1                  I 17 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40299 38 -     48117 --------------------------------------------------------------------------------ATC---T-TTAAT-A----TCA--TG--T-GCT---ATAA----CCAT---GG-ACTGATGTA-----
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 17 C 0
s Miopithecus_ogouensis.k141_1534655                         20667 73 -     27822 ---CA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7169 47 +     27589 ------------------------------------------------------------------------TAAA-GC-ATC---T-TTCAT-A----TCA--TG--T-GCC---ATAA----CCAT---GG-ATTCATATA-AA-A
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 32 I 3
s Mirza_zaza.k141_766280                                     51013 76 -     62432 GATCA---TTT-A-TTCATTTTCC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTAAT-A----G-----A--T-GCC---ATAA----CCAT---GG-ACTGATATA-AA-A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177460 38 +    366855 --------------------------------------------------------------------------------ATC---T-TTAAA-A----TCA--TG--T-GCC---ATAA----CCAT---GG-ACTGACATA-----
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 17 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17147 81 -     63510 GACCA---TTT-A-TTCATTTCATTTGAC-AAGAATT----------------------C----------A-TAAG-GC-ATC---T-TTCAT-A----TCA--TA--TTGCC---ATAA----CCCT---TG-ACTCATGTA-AA-A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 3
s Murina_feae.MurFea_scaffold_17764                          37339 38 +     47283 --------------------------------------------------------------------------------ATC---T-TTAGT-A----TCA--TC--T-GCC---ATAA----ACAT---GG-ACCGATGTA-----
i Murina_feae.MurFea_scaffold_17764                      I 17 C 0
s Mus_caroli.LT608237.1                                   35591669 48 + 120012414 ----ACCATCT-A-TT---TTTAA------------TGGACAATAAT-----------Tc----------a-ca-a-at-at----t-ttaac-a----t--aata------------------------------------------
i Mus_caroli.LT608237.1                                  I 6698 C 0
s Mus_musculus.chr8                                       41686034 42 + 129401213 ----------T-A-TT---TTTAG------------TGgacaataat-----------tt----------a-ta-a-at-at----t-ttaac-a----t--catG------------------------------------------
i Mus_musculus.chr8                                      I 7 C 0
s Mus_pahari.LT608297.1                                   58215915 48 +  89631738 GA--T--ATTT-A-TT---TCTAC------------TGGActatagt-----------tt----------a-ta-a-at-at----t-ttaac-a----t--catG------------------------------------------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495354 42 + 130317789 ----------T-A-TT---TTTAG------------TGgacaataat-----------tt----------a-ta-a-at-at----t-ttaac-a----t--catG------------------------------------------
i Mus_spretus.CM004101.1                                 I 7 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81390 79 -     86153 GACCA---TTT-A-TTCATTTTAC------------TTGAGAATAAT-----------TG----------A-TA-A-AC-ATC---T-TTGAT-A----TC-C-TG--T-GCC---TCAA----TCAT---GA-ACTGATATA-AA-A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353772 80 +  14710649 gacta---ttt-a-ttcatttcacttgAC-AAGAATT----------------------T----------A-TAAA-GC-ATC---T-TTCAT-A----TCA--TA--T-GCC---CTAA----CCAT---GG-ATTGATATA-AA-A
i Mustela_putorius.JH418006.1                            C 0 I 3
s Myotis_brandtii.KE162005.1                               9791389 38 +  10118263 --------------------------------------------------------------------------------atc---t-ttagt-A----TCA--TG--T-GCT---ATAA----ACAT---GT-ACTGATGTA-----
i Myotis_brandtii.KE162005.1                             I 17 C 0
s Myotis_davidii.KB100139.1                                4385749 38 +   6019432 --------------------------------------------------------------------------------acc---t-ttagC-A----TCA--TG--T-GCT---ATAA----ACAT---GG-ACTGATGTA-----
i Myotis_davidii.KB100139.1                              I 17 C 0
s Myotis_lucifugus.GL429869.1                               381571 38 +   4330536 --------------------------------------------------------------------------------atc---t-ttagt-A----TCA--TG--T-GCT---ATAA----ACAT---GG-ACTGATGTA-----
i Myotis_lucifugus.GL429869.1                            I 17 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          398 38 +     18357 --------------------------------------------------------------------------------ACC---T-TTAGT-A----TCA--TG--T-GCT---ATAA----ACAT---GG-ACTGATGTA-----
i Myotis_myotis.MyoMyo_scaffold_66571                    I 17 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118210 79 +    130748 GAGCA---TTT-A-TTCATTTCAT------------TTGACAAGAAC-----------AT----------A-TAAA-AC-ATC---TATTAAT-A----TCA--TG--T-GCA---TGAA----ACAG---GG-ATGGGTATA-A---
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              27332 76 +     34575 GACTA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467765 47 -  31847680 ------------------------------------------------------------------------taaa-gc-atC---T-TTCAT-A----TCA--TG--T-GCC---ATAA----CCAT---GG-ATTCATATA-AA-A
i Neomonachus_schauinslandi.NINY01007730.1               I 32 I 3
s Noctilio_leporinus.NocLep_scaffold_7894                   126254 36 -    149072 --------------------------------------------------------------------------------ATC---G-GTAAT-A----TCA--TG--T-GCC---GTAA----CCAT---GG-CCTGATA-------
i Noctilio_leporinus.NocLep_scaffold_7894                I 16 C 0
s Nomascus_annamensis.k141_1771965                           52069 76 -    132029 GACCG---TTT-A-TTCGTTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTAATATA-AA-A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8164 76 -     16345 GACCG---TTT-A-TTCGTTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTAATATA-AA-A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14049 76 +     22201 GACCG---TTT-A-TTCGTTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTAATATA-AA-A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412270 76 -  22158432 GACCG---TTT-A-TTCGTTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTAATATA-AA-A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24447 76 -     54323 GACCG---TTT-A-TTCGTTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTAATATA-AA-A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196877 40 +   9404916 GACCA---CTT-A-CTCATTTCACTTAAC-AAGAATT----------------------T----------A-TGAA-GC-A-------------------------------------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 39
s Nycticebus_bengalensis.LG01                             93634902 76 + 196305487 GACCA---TTT-A-TTCATTTTAC------------TTCACAGTAAT-----------TT----------A-TA-A-AT-ATC---T-TTAAT-G----T-----G--T-GAC---ATTA----CCAT---GA-ACTGTTCTA-AA-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1660 76 -      3937 GACCA---TTT-A-TTCATTTTAC------------TTCACAGTAAT-----------TT----------A-TA-A-AT-ATC---T-TTAAT-G----T-----G--T-GAC---ATTA----CCAT---GA-ACTGTTCTA-AA-A
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563141 76 - 199412804 GACCA---TTT-A-TTCATTTTAC------------TTCACAGTAAT-----------TT----------A-TA-A-AT-ATC---T-TTAAT-G----T-----G--T-GAC---ATTA----CCAT---GA-ACTGTTCTA-AA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549837 40 -   3988456 GACCA---TTT-A-TTCGTTTTAC------------TGAACAAGAAT-----------TT----------A-CA-A-AC-AT------------------------------------------------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 36
s Octodon_degus.JH651603.1                                11046105 73 -  11899542 Gatga---ttc-a-ttcattttac------------ttgaaa----a--a-a------tt----------tata-a-at-gtc---t-ttACT-A----TCA--TG--C-ACC---TCAG----CAGT---Gg-actgata-------
i Octodon_degus.JH651603.1                               C 0 I 2
s Odobenus_rosmarus.KB229312.1                             1450329 80 +   2017862 GAGCA---CTT-A-TTCATTTCACTTGAC-AAGAATT----------------------T----------A-TAAA-GC-ATC---T-TTCAT-A----TCAC--G--T-GCC---ATAA----CCAT---GG-ATTCATATA-AA-A
i Odobenus_rosmarus.KB229312.1                           C 0 I 3
s Ondatra_zibethicus.OndZib_scaffold_7387                    91380 68 -    140218 GACCA---CTT-A-TT---TTTAC------------TTGAGAATAAT-----------TT----------A-TA-A-AT-AT----T-TTAAC-A----CTA--TG--T-GCC---AC--AACC--AT---AA-GTTGA---------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2236 71 -     41509 gacCA---TTT-G-TT---TTTAC------------TTGACAGTAAT-----------TT----------A-TA-A-AT-AT----T-TTAGC-A----TCA--TG--T-ACT---AC--AACC--ATAATAA-TTTGA---------
i Onychomys_torridus.OnyTor_scaffold_28377               I 487 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12023 80 -     14239 GTCTC---CTT-A-TTCATTTCAT------------TTCACAAAAAA-----------TT----------A-TGAA-GT-ATC---T-TTAAT-G----TCA--TG--T-GCC---AGAA----CCAT---GG-ACTTATATA-AA-A
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 232
s Oryctolagus_cuniculus.CM000791.1                       107102300 79 - 174332312 AAACA---tct-a-ttcattttac------------ttgagaaGAAT-----------TT----------A-TA-A-AC-ATA---C-CTAAG-A----TCA--TG--T-ATC---ATAA----CCAT---GG-GCTgatata-aa-a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37915 80 +    559221 GACCA---CTT-A-CTCATTTCACTTAAC-AAGAATT----------------------T----------A-TGAA-GC-ATC---T-TTCAT-A----TCA--TA--T-ACC---ATTA----CCAT---GG-ACtcatata-aa-a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 3
s Otolemur_crassicaudatus.k141_649260                        38299 76 -     51505 GACCA---TTT-A-TTCATTTTAC------------TTCACAGTAAT-----------TT----------A-TA-A-AT-ATC---T-TTAAT-G----T-----G--T-GAC---ATCA----CCAT---GA-ACTGTTCTA-AA-A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351302 76 +   1103335 gacca---ttt-a-ttcattttac------------ttcacagtaat-----------tt----------a-ta-a-at-atc---t-ttaat-g----T-----G--T-GAC---ATCA----CCAT---GA-ACTGTtcta-aa-a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.KZ622849.1                                 31845 76 -    110857 GATCG---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-actaatata-aa-a
i Pan_troglodytes.KZ622849.1                             I 93 I 458
s Panthera_onca.PanOnc_flattened_line_3271                   23076 81 -    230217 GATCA---TTT-A-TTCATTAAATTTGAC-AGGAATT----------------------T----------A-TAAG-GC-ATC---T-TTCAT-A----TCA--TG--TTGTC---ATGA----CCAT---TG-ACTCATATA-AA-A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 3
s Panthera_pardus.KV860321.1                              18460402 81 -  18783137 gatca---ttt-a-ttcattaaatttgaC-AGGAATT----------------------T----------A-TAAG-GC-ATC---T-TTCAT-A----TCA--TG--TTGTC---ATGA----CCAT---TG-ACTCATata-aa-a
i Panthera_pardus.KV860321.1                             C 0 I 3
s Panthera_tigris.KE722367.1                               3971122 81 +   8748460 gatca---ttt-a-ttcattaaatttgaC-AGGAATT----------------------T----------A-TAAG-GC-ATC---T-TTCAT-A----TCA--TG--TTGTC---ATGA----CCAT---TG-ACTCATATA-AA-A
i Panthera_tigris.KE722367.1                             C 0 I 3
s Papio_anubis.CM001495.2                                   241493 76 - 183742232 gacca---ttt-a-ttcattttac------------ttgaCAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             7957 76 +     21308 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  288996 76 -  20919399 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Papio_hamadryas.Contig39                               C 0 I 19
s Papio_kindae.k141_2214839                                  20612 76 -     27687 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13748 76 +     16796 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20558 76 -     23640 GACCA---TTT-A-TTCATTTTGC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13715 81 +     78924 GACCA---TTT-A-TTCATTCCATTAGAC-AAGAATT----------------------T----------G-TAAG-GC-ACC---T-TTTGT-A----TCA--TG--TCACC---ATAA----CTAT---TG-ACTCATGTA-AA-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 3
s Perodicticus_ibeanus.k141_1921260                          24585 76 +     31479 GACCA---TAT-A-TTCATTTTAC------------TTCACAGTAAT-----------TT----------A-TA-A-AT-ATC---T-TTGAT-G----T-----G--T-GAC---ATCA----CCAT---GA-ACTGTTCTA-AA-A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            16949 76 -     24908 GACCA---TAT-A-TTCATTTTAC------------TTCACAGTAAT-----------TT----------A-TA-A-AT-ATC---T-TTGAT-G----T-----G--T-GAC---ATCA----CCAT---GA-ACTGTTCTA-AA-A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         288 69 +      9367 GAATA---TTC-A-TTCATTTAGT------------TTGACA---AT-----------TT----------A-TA-T-GC-ATT---T-GGTGT-A----T--TGTG--C-ATA---ACAA----CGAT---G--GCTGAT--------
i Perognathus_longimembris.PerPac_flattened_line_89005   I 9 C 0
s Peromyscus_maniculatus.KI615324.1                         245461 71 +  18517816 GACCA---TTT-G-TT---TTTAC------------TGGACAGTAAT-----------TT----------A-TA-G-GC-AT----T-TTAGC-A----TCA--TG--T-ACC---AC--ATCC--ATAATAA-GTtga---------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30577 53 -     56120 GATCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-TA-A-AT-GTC---T-TTAAT-A----TCA--TA------------------------------------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                             776 76 +     55023 GACCA---TTT-A-TTCATTTTAC------------TTGATAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATACA-AA-G
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          327 76 -     89929 GACCA---TTT-A-TTCATTTTAC------------TTGATAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATACA-AA-G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             915 76 +     40849 GACCA---TTT-A-TTCATTTTAC------------TTGATAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATACA-AA-G
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252582 76 +  14605196 gacca---ttt-a-ttcattttac------------ttgaTAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATACA-AA-G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1517 38 +     22231 --------------------------------------------------------------------------------ATC---T-TTAGT-A----TCA--TG--T-GCT---ATAA----ACAT---GG-ACTGACATA-----
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 17 C 0
s Pithecia_albicans.k141_1239476                             63531 76 +    207309 TGCCA---TTC-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---GCAA----CCAT---AG-ACTGATGTA-AA-A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4625 76 -     25401 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---GCAA----CCAT---AA-ACTGATGTA-AA-A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30366 76 +     58159 TGCCA---TTC-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---GCAA----CCAT---AG-ACTGATGTA-AA-A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30642 76 +     63561 TGCCA---TTC-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---GCAA----CCAT---AG-ACTGATGTA-AA-A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30405 76 +     51148 TGCCA---TTC-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---GCAA----CCAT---AG-ACTGATGTA-AA-A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555372 76 -   4542175 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---GCAA----CCAT---AG-ACTGATGTA-AA-A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30389 76 +     51125 TGCCA---TTC-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---GCAA----CCAT---AG-ACTGATGTA-AA-A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6793 76 +     39866 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TC----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---AG-GCTGATATG-AA-A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1878 76 -      9282 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TC----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---AG-GCTGATATG-AA-A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41282 76 -     87950 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TC----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---AG-GCTGATATG-AA-A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41675 76 -     88961 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TC----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---AG-GCTGATATG-AA-A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6374 76 -     39403 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TC----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---AG-GCTGATATG-AA-A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41326 76 +     87928 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TC----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---AG-GCTGATATG-AA-A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6371 76 -     60166 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TC----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---AG-GCTGATATG-AA-A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13307 76 -     67232 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TC----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---AG-GCTGATATG-AA-A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41223 76 -     90634 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TC----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---AG-GCTGATATG-AA-A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42691 76 +     89403 TGCCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TC----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---AG-GCTGATATG-AA-A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176288 76 - 189387572 GATCg---ttt-a-ttcattttac------------ttgaCAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-actaatata-aa-a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191106 76 -   9816681 GATCG---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTAATATA-AA-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25912 76 +     69807 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43107 76 -     80239 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_121686                 8839 46 +     14086 -----------------------------------------------------------------------------GC-ATCTGTT-TTTAA-G----CCA--TG--T-TCT---GGAA----CCAC---GG-ACTGAAAGG-AA-A
i Procavia_capensis.ProCapCap_scaffold_121686            I 37 N 0
s Prolemur_simus.MPIZ01000396.1                            1981238 76 +   4620579 gacca---ttt-a-ttcattttac------------ttgaCAAGAAT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---GTAA----CTGT---GG-Actgatata-aa-a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564704 76 -   2598838 gacca---ttt-a-ttcattttac------------ttgaCAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTAAT-A----G-----A--T-GCC---ATAA----CCAT---GG-ACTGATACA-AA-A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2340 76 -      7103 GACCG---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTAAT-A----G-----A--T-GCC---ATAA----CCAT---GG-ACTGATACA-AA-A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             2937 76 -     11706 GACCG---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTAAT-A----G-----A--T-GCC---ATAA----CCAT---GG-ACTGATACA-AA-A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6673 76 -     30655 GACCG---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-GTC---T-TTAAT-A----G-----A--T-GCC---ATAA----CCAT---GG-ACTGATACA-AA-A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          32998 76 +     46564 GACCG---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-GTC---T-TTAAT-A----G-----A--T-GCC---ATAA----CCAT---GG-ACTGATACA-AA-A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93269 76 -     98465 GACCA---TTT-A-TTTATTTTAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTAAT-A----G-----A--T-GCC---ATAA----CCAT---GG-ACTGATACA-AA-A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          6906 76 +     35169 GACCA---TTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-TA-A-AC-ATC---T-TTAAT-A----G-----A--T-GCC---ATAA----CCAT---GG-ACTGATACA-AA-A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            34797 46 +     52041 gacca---ttt-a-tt---at---------------ttgacaatcat-----------tt----------a-ta-c-at-at----t-ttaac-a----tCA--TG------------------------------------------
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50342 38 -     66298 --------------------------------------------------------------------------------acc---T-TTAAT-A----TCA--TG--T-GCC---ATAA----CCAT---GG-actgatata-----
i Pteronotus_parnellii.KE847780.1                        I 17 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3337 80 -     18639 GACCA---TTT-A-TTCATTTCATTTGAC-AAGAATT----------------------T----------A-TAAA-AC-ATC---T-TTCAT-A----TCA--TA--T-GCC---CTAA----CTAT---GG-ATTCATATA-AA-A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 3
s Pteropus_alecto.KB030862.1                               5839559 76 -  28871421 GACCA---TTT-A-TTCACTTTAC------------t----------------------tgacaagaattt-taaa-gc-atc---t-tTAAT-A----CCA--TA--T-GCC---ATAA----CCAT---GG-ACtgatata-----
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536068 76 -   4952924 GACCA---TTT-A-TTCACTTTAC------------t----------------------tgacaagaattt-taaa-gc-atc---t-ttAAT-A----CCA--TA--T-GCC---ATAA----CCAT---GG-ACtgatata-----
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097716 81 +  38429054 gatca---ttt-a-tttattaaatttgac-AGGAATT----------------------T----------A-TAAG-GC-ATC---T-TTCAT-A----TCA--TG--TTGTC---ATGA----CCAT---TG-GCTCATata-aa-a
i Puma_concolor.QAVW01001104.1                           C 0 I 3
s Pygathrix_cinerea.k141_1153803                             25287 76 +     91421 GACTA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AC-G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151780 76 -   7812017 GACTA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AC-G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6157 76 +     72585 GACTA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AC-G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021271 49 -  90668790 GACCA---TTT-G-TT---TTTAC------------TTGacaataat-----------tt----------a-tt-a-at-at----t-ttaac-a----cCA--TG------------------------------------------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913452 71 +   3329780 --------ctt-a-TTCATTTAAC------------T----------------------TGACAAGAATTA-TAAC-AT-ATC---T-TTAAT-A----GTA--TG--A-GCC---ATAA----CCAT---AG-ACAGAtata-----
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            27097 76 +     27361 GACTA---CTT-T-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120464 76 + 195417433 Gacta---ctt-t-ttcattttac------------ttgACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234705 76 -   7961872 GACTA---CTT-T-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73481 76 -    116970 GACCA---TTT-A-TTCATTTTAC------------T----------------------TGACAAGAATTT-TAAA-GC-ATC---T-TTAAT-A----CCA--TG--T-GCC---ATAA----CCAT---GG-ACTTATATA-----
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2672 73 +     27962 TACCA---TTT-A-TTTATCTTGC------------TTGACAA---T-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2567 73 +      6077 TACCA---TTT-A-TTTATCTTGC------------TTGACAA---T-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2659 73 +      5971 TACCA---TTT-A-TTTATCTTGC------------TTGACAA---T-----------TT----------A-CA-A-AG-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATAAA-AA-A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2601 73 +      5932 TACCA---TTT-A-TTTATCTTGC------------TTGACAA---T-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATAAA-AA-A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               924 73 -      4390 TACCA---TTT-A-TTTATCTTGC------------TTGACAA---T-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATAAA-AA-A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390356 73 - 209938924 TACCA---TTT-A-TTTATCTTGC------------TTGACAA---T-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2549 73 +      5979 TACCA---TTT-A-TTTATCTTGC------------TTGACAA---T-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAG----CCAT---GG-ACTGATAAA-AA-A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3290 73 -      4301 TACCA---TTT-A-TTTATCTTGC------------TTGACAA---T-----------TT----------A-CA-A-AC-ATC---T-TCAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-A
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107729 44 + 121099817 -------------------------------------------------------------------------A-A-AA-ATT---G-TTTGT-G----T-----GTAT-GCC---ACAA----CCAT---GG-ACTGATATG-AA-A
i Saimiri_boliviensis.NW_024100920.1                     N 0 I 1
s Saimiri_cassiquiarensis.k141_1467335                       29291 44 -     47369 -------------------------------------------------------------------------A-A-AA-ATT---G-TTTGT-G----T-----GTAT-GCC---ACAA----CCAT---GG-ACTGATATG-AA-A
i Saimiri_cassiquiarensis.k141_1467335                   N 0 I 1
s Saimiri_macrodon.k141_1173117                              29680 44 -     79414 -------------------------------------------------------------------------A-A-AA-ATT---G-TTTGT-G----T-----GTAT-GCC---ACAA----CCAT---GG-ACTGATATG-AA-A
i Saimiri_macrodon.k141_1173117                          N 0 I 1
s Saimiri_oerstedii.k141_245838                              26372 44 -     34454 -------------------------------------------------------------------------A-A-AA-ATT---G-TTTGT-G----T-----GTAT-GCC---ACAA----CCAT---GG-ACTGATATG-AA-A
i Saimiri_oerstedii.k141_245838                          N 0 I 1
s Saimiri_sciureus.k141_1467173                              13778 44 -     22428 -------------------------------------------------------------------------A-A-AA-ATT---G-TTTGT-G----T-----GTAT-GCC---ACAA----CCAT---GG-ACTGATATG-AA-A
i Saimiri_sciureus.k141_1467173                          N 0 I 1
s Saimiri_ustus.k141_360372                                  28923 44 -     47109 -------------------------------------------------------------------------A-A-AA-ATT---G-TTTGT-G----T-----GTAT-GCC---ACAA----CCAT---GG-ACTGATATG-AA-A
i Saimiri_ustus.k141_360372                              N 0 I 1
s Sapajus_apella.ctg103                                     236954 76 +   5703754 TACCA---TTT-A-TTCATCTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAG----CCAT---GG-ACTGATATA-AA-A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6544 76 +     21866 TACCA---TTT-A-TTTATCTTAC------------TTGACAAGAAT-----------TT----------A-CA-G-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAG----CCAT---GG-ACTGATATA-AA-A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114650 79 +    313613 GACCA---TTT-A-TTCATTTCAC------------T----------------------TGATAAAAATGA-TAAA-AC-ATC---T-TTAAT-A----TCA--TG--T-GCC---ATAA----ATGT---GA-ACTAACATA-AA-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 3
s Semnopithecus_entellus.k141_158471                         23604 76 +     27374 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27123 76 +     58920 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13619 76 -     45317 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21277 76 -     42441 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     23957 76 -     29113 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27026 76 -     48123 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47681 68 +     77746 GACCA---TTA-C-TT---TTAAC------------TTGACAATAAT-----------TC----------A-TA-A-AT-GT----T-TTAGC-A----TC--GTG--A-GCC---AC--ATTC--AT---AC-AGTGA---------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1856976 69 -   1910179 GACCA---TTT-A-TTCATTTCAC------------T----------------------T----------A-TACA-AC-ATG---T-CTAAC-A----TC--GTG--T-GCC---ATAA----CCGT---GG-ACTGATAGA-CA-A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1866963 56 +   3870691 gacca---ttt-a-ttcattttac------------tagGTAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----TC--GTG--T-GC------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 16
s Spilogale_gracilis.SpiGra_flattened_line_13525              5122 62 -     97271 GACCA---TTT-A-TTCATTTCATTTGAC-AAGAATT----------------------T----------G-TAAA-GC-ATC---T-TTCAT-A----TCA--TG--T-GCC---ATAA----------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 6
s Suricata_suricatta.SurSur_flattened_line_6629             123554 81 +    196729 GACCA---TTT-A-TTCATTTCATTTGAC-AAGAATT----------------------C----------A-TAAG-GC-ATC---T-TTCAT-A----TCA--TA--TTGCC---ATAA----CCCT---TG-ACTCATGTA-AG-A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 3
s Symphalangus_syndactylus.tarseq_199                       389529 76 +   1523678 GACCG---TTT-A-TTCGTTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAGT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTAATATA-AA-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12323 38 +     22964 --------------------------------------------------------------------------------ATC---T-TTAAT-A----TCA--TG--T-GCT---GTAA----CCAT---GG-ACTGATATA-----
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 17 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1326 79 +      5583 GAGCA---TTT-A-TTCATTTCAT------------TTGACAGGAAC-----------AT----------A-TAAA-AC-ATC---TATTAAT-A----TCA--TG--T-GCA---TGAA----ACAG---GG-ATGGGTATA-A---
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190240 80 +    199430 GACCA---TTT-A-TTCATTTCAG------------T----------TGGCAAAAATT-T----------A-TAAA-GC-TTC---T-TTAAT-A----TCA--TG--T-GCC---ATAA----CCAG---GG-ACTAATATA-GA-A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 4
s Tapirus_terrestris.TapTer_scaffold_755                    104191 80 -    539355 GACCA---TTT-A-CTCATTTCAG------------T----------TGACAAAAATT-T----------A-TAAA-CC-TTC---T-TTAAT-A----TCA--TG--T-GCC---ATAA----CCAG---GG-ACTAATATA-GA-A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 4
s Tarsius_lariang.k141_1780720                                5541 76 +      6850 GACCA---TGT-A-TTTATTTTAC------------TTGATAGGGAT-----------GC----------A-TG-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ATAA----CTAC---GG-ACTGATTTG-AA-A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5589 76 +     20590 GACCA---TGT-A-TTTATTTTAC------------TTGATAGGGAT-----------GC----------A-TG-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ATAA----CCAC---GG-ACTGATTTG-AA-A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351479 76 - 186847797 gacca---ttt-a-ttcattttac------------ttgaCAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GCC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22902 74 -     33621 GGTTA---TTT-A-TTCATTTTAC------------TTGAAAAGAAT-----------TT----------A-TA-A-AT-GTC---T-TTAAT-A----TCAC--A--T-ATG---ACAG----CTAT---AG-ACTAATA-------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 7
s Tolypeutes_matacus.TolMat_scaffold_31955                   18470 80 -     31044 GAGCA---TTT-AATTCATTTCAT------------TTGACCAGAAC-----------TT----------C-TACG-GC-ATC---TCTTAAT-A----TCA--TG--T-GCA---TGAA----CCAC---GG-ACTAACATA-A---
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478366 38 -    610378 --------------------------------------------------------------------------------GTC---T-TTAAT-A----TCA--TG--T-GCC---ATAG----CTGT---GG-ACTGATATA-----
i Tonatia_saurophila.TonSau_scaffold_294                 I 17 C 0
s Trachypithecus_auratus.k141_1189070                        19168 76 +     26378 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31832 76 -     78344 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18489 76 +     25722 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26783 76 -     62838 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26831 76 +     46913 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7637 76 -     28527 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28722 76 -     64340 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26759 76 -     63452 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8202 76 +     22490 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1630 76 -      6147 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8535 76 -     13050 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253774 76 -   6242583 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59525 76 +     59866 GACCA---CTT-A-TTCATTTTAC------------TTGACAAGAAT-----------TT----------A-CA-A-AC-ATC---T-TTAAT-A----T-----G--T-GTC---ACAA----CCAT---GG-ACTGATATA-AA-G
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832508 64 -   4065304 ------------------TTTTGC------------TTGTcagtaat-----------tt----------a-ta-a-at-atc---t-tcaAA-A----TCAC--G--T---C---ATAA----CTAT---GG-ATCGATACA-AA-A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6822 66 -     70247 ------------------TTTTGC------------TTGTCAGTAAT-----------TT----------A-TA-A-AT-ATC---T-TCAAA-A----TCACATG--T---C---ATAA----CTAT---GG-ACTGATACA-AA-A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     852 78 -     21056 GATCA---TTT-A-TTCATTTCAT------------T----------------------TCATAAGAATGG-TAAA-AC-ACC---T-TCAAT-A----T--TGTG--T-GCT---ATAA----ATGT---GA-AACAATATA--A-A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 3
s Ursus_maritimus.KK499267.1                                180489 80 +   5085361 GAtca---ctc-a-ttcatttcatttgaC-AAGAATT----------------------T----------A-TAAA-GC-ATC---T-TTCAT-A----TCA--TG--T-GCC---ATAA----CCTT---GG-ATTCATATA-AA-A
i Ursus_maritimus.KK499267.1                             C 0 I 3
s Varecia_rubra.k141_787544                                  23882 76 -     30710 GCCCA---TTT-A-TTCATTTTAC------------TTGACAAGACT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CCAT---GG-ACTGATATA-AA-A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22789 76 -    147434 GCCCA---TTT-A-TTCATTTTAC------------TTGACAAGACT-----------TT----------G-TA-A-AC-ATC---T-TTAAT-G----G-----A--T-GCC---ATAA----CCAT---GG-ACTGATATA-AA-A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103637 80 -    112863 GACCA---CTT-A-CTCATTTCACTTAAC-AAGAATT----------------------T----------A-TGAA-GC-ATC---T-TTCAT-A----TCA--TA--T-ACC---ATTA----CCAT---GG-ACTCATATA-AA-A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 3
s Xerus_inauris.XerIna_scaffold_2302                        172741 56 -    224448 GATCA---TTT-A-TTCATTTTAC------------TAGACAAGAAT-----------TT----------A-CA-A-AT-ATC---T-TTAAT-A----T--TGTG--C-AC------------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 16
s Zalophus_californianus.ZalCal_flattened_line_17732         27527 80 -     86975 GACCA---CTT-A-TTCATTTCACTTGAC-AAGAATT----------------------T----------A-TAAA-GC-ATC---T-TTCAT-A----TCAC--G--T-GCC---ATAA----CCAT---GG-ATTCATATA-AA-A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_230229                      2054 35 +      2695 -------------------TTTAC------------TTGAAAAGAAT-----------TC----------A-TA-A-AG-ACT---T-TTAGC-A----T------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 6 I 50
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Vicugna_pacos.KN270157.1                                   75090  0 +   5488506 C
e Tursiops_truncatus.MRVK01000835.1                       17360011  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6478966 186 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172081  0 -    200418 C
e Sus_scrofa.CM000828.4                                    6639884  0 +  69701581 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6468  0 +     16473 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51815  0 +     55069 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3214  0 -      8168 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11130  0 -     15039 C
e Pantholops_hodgsonii.KE114653.1                          1614318  0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       3394  0 +     17875 C
e Ovis_aries.CM001607.2                                   26402875  0 -  44047080 C
e Orcinus_orca.KB316932.1                                  8095272  0 +  10937097 C
e Okapia_johnstoni.LVCL01S0005463.1                          12886  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434894  0 -    630418 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226002  0 -   7148211 C
e Moschus_moschiferus.MosMos_scaffold_13123                  22907  0 -     82753 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351833  0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79944  0 +     93471 C
e Lipotes_vexillifer.KE559953.1                             333400  0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64366  0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1877  0 -     16823 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6354  0 -     36432 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755  0 +     48891 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90002  0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3857  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63641  0 -    133382 C
e Equus_przewalskii.KK951119.1                              410751  0 -    498745 C
e Equus_caballus.CM000403.2                               21373965  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041  0 -   4378816 C
e Elaphurus_davidianus.JRFZ01104969.1                       238323  0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18624090  0 -  35494412 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75421  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20449  0 -     39886 C
e Capra_hircus.CM004588.1                                 26589921  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407648  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207698  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664038  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629752  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1528583  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543559  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753420  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354852  0 +  48749331 C
e Bison_bison.KN261452.1                                     20465  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84932  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         2970  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955762  0 -  23207421 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49036  0 -     68529 C
e Ammotragus_lervia.NIVO01071767.1                         1583937  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       3883 44 +     36723 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CAGaaaagtgg-aaa-a----tg----cc
s Acinonyx_jubatus.LLWD01001279.1                           811539 38 +   1699592 ------------------------aac-a-----caaataca--caaaagag-T----A-TGCA--AGGGG-AAA-A----TG----G-
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18731 18 +     63021 ------------------------------------------------------------TATACATTGAA--AC-A----AG----TT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414066 38 +  29979442 ------------------------AAT-A-----CAAATGCA--CAAAAGAA-T----A-TACA--AGTGG-AAA-A----TG----G-
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Ailurus_fulgens.LNAC01001112.1                            214164 38 +    347723 ------------------------aat-a-----taaatgaa--caaaagag-t----A-TACA--AGTGG-AAA-A----TG----G-
i Ailurus_fulgens.LNAC01001112.1                         I 3 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16675 32 -     61208 --------------------------T-A-----CAAATGCA---AAAGAGA-A----G-CTGAAAGTAGA--AC--------------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   46209 44 +     53615 TA--------------------GAA-T-A-----CAGATATA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42153 44 +     44087 TA--------------------GAA-T-A-----CAGATGTA--CAAAAGAG-A----G-CACAAAAGTGG-AAA-A----TA----GC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14791 44 -     21945 TA--------------------GAA-T-A-----CAGATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16463 44 +     32033 TA--------------------GAA-T-A-----CAGATGTA--CAAAAGAG-A----G-CACAAAAGTGG-AAA-A----TA----GC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70916 44 -     84148 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43149 44 -     78289 TA--------------------AAA-T-A-----CAAATGCA--CAGAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42595 44 +     55831 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41036 44 -     64179 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-A----G-CACAAAAGTGG-AAA-A----TA----GC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22683 44 -     24835 TA--------------------AAA-T-A-----CAGATGCA--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39666 44 +     45454 TA--------------------AAA-T-A-----CAGATGCA--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45364 44 +     70886 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7489 44 +     30854 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31628 44 +     42133 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-A----G-CACAAAAGTGG-AAA-A----TA----GC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583937 15 +   2318259 ---------------------------------------------------------------aaaagtaa-aat-a----tg----g-
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175366 26 -    412891 ----------------------------------------------AAAGAA-A----A-TACCAaaataa-aaa-a----tg----a-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 4
s Antilocapra_americana.AntAmePen_scaffold_21030             49036 15 -     68529 ---------------------------------------------------------------AAAAGTAA-AAT-A----TG----G-
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   49416 44 -     65372 TG--------------------AAA-T-A-----CAAATGCA--TAAAAGAG-A----A-CACAAAAGTGG-AAA-A----CA----GC
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43170 44 +     43593 TG--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----CA----GC
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671183 44 +   5030052 tg--------------------aaa-t-a-----caaatgCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----CA----GC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22825 44 -     23494 TG--------------------AAA-T-A-----CAAATGCA--TAAAAGAG-A----A-CACAAAAGTGG-AAA-A----CA----GC
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                7961 44 +      8415 TG--------------------AAA-T-A-----CAAATGCA--TAAAAGAG-A----A-CACAAAAGTGG-AAA-A----CA----GC
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14711 38 -     32367 -----------------------GA-T-G-----TAAGTGCA--CAAAAGGG-A----A---CAAAATAAA--AC-A----TA----GT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3659 26 -     15198 ----------------------------------------------AAAGAG-A----A-TACCAAAATAA-AAA-G----CA----G-
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 4
s Ateles_geoffroyi_b.tarseq_1536                               273428 44 +  21539123 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9594 44 +     48076 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4731 44 -     28759 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32285 44 +     44353 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47655 44 -     71267 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21715 44 -     33135 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-A----A-CACAGAAGTGG-AAA-A----TA----GC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4896 39 +     11645 TA--------------------GAA-T-A-----CAAATGCA--CGAAAGAG-A----A-CACAAAAATGG-AAA--------------
i Avahi_laniger.k141_2756659                             C 0 I 14
s Avahi_peyrierasi.k141_1823318                               4902 39 -     19611 TA--------------------GAA-T-A-----CAAATGCA--CGAAAGAG-A----A-CACAAAAATGG-AAA--------------
i Avahi_peyrierasi.k141_1823318                          C 0 I 14
s Balaenoptera_acutorostrata.KI537508.1                    7955762 15 -  23207421 ---------------------------------------------------------------aaaagtaa-aaa-a----tg----g-
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 4
s Balaenoptera_bonaerensis.DF507193.1                         2970 15 -      4711 ---------------------------------------------------------------aaaagtaa-aaa-a----tg----g-
i Balaenoptera_bonaerensis.DF507193.1                    C 0 I 4
s Beatragus_hunteri.BeaHun_scaffold_7278                     84932 15 +    124022 ---------------------------------------------------------------AAAAGCAA-AAT-A----TG----G-
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20465 15 +    288883 ---------------------------------------------------------------aaaagtaa-aat-a----cg----G-
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354852 15 +  48749331 ---------------------------------------------------------------aaaagtaa-aat-a----cg----G-
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753420 15 +   1948126 ---------------------------------------------------------------aaaagtaa-aat-a----cg----G-
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543559 15 -  45695690 ---------------------------------------------------------------aaaagtaa-aat-a----cg----G-
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528583 15 -   4408762 ---------------------------------------------------------------agaagtaa-aat-t----tg----g-
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6620 44 +     28062 TA--------------------AAA-T-A-----CAAACGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41914 44 -     91139 TA--------------------AAA-T-A-----CAAACGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19440 44 +     95584 TA--------------------AAA-T-A-----CAAACGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19353 44 +    119600 TA--------------------AAA-T-A-----CAAACGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8899 44 +     18648 TG--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-G----A-CACAAAGGTGA-AAA-A----TA----GC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8437 44 -     13885 TG--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-A----A-CACAAAGGTGG-GAA-A----TA----GC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             505 44 -      8861 TG--------------------AAA-T-A-----CAAATGTA--CAAAAGAT-G----A-CACAAAGGTGG-AAA-A----CA----GC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452898 44 + 189096842 TG--------------------AAA-T-A-----CAAATGTA--CAAAAGAT-G----A-CACAAAGGTGG-AAA-A----CA----GC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                421 44 +      8664 TG--------------------AAA-T-A-----CAAATGTA--CAAAAGAT-G----A-CACAAAGGTGG-AAA-A----CA----GC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629752 15 +  17673402 ---------------------------------------------------------------ataagcaa-aaa-a----tg----g-
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664038 15 +   7040546 ---------------------------------------------------------------ataagcaa-aaa-a----tg----g-
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207698 15 +   1652518 ---------------------------------------------------------------ataagcaa-aaa-a----tg----g-
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504090 36 +  60362399 ------------------------AAA-A-----CAAATG----CAAAAGAA-T----A-TACA--TGTGG-AAA-A----TG----G-
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7726 36 -     23171 ------------------------AAA-A-----CAAATG----CAAAAGAA-T----A-TACA--TGTGG-AAA-A----TG----G-
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221069 36 +   9314153 ------------------------aaa-a-----caaatg----caaaagaa-t----a-tacA--TGTGG-AAA-A----TG----G-
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            41614204 36 +  59632846 ------------------------aaa-a-----caaatg----caaaagaa-t----a-tacA--TGTGG-AAA-A----TG----G-
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            45105785 36 -  63665305 ------------------------aaa-a-----caaatg----caaaagaa-t----a-tacA--TGTGG-AAA-A----TG----G-
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Capra_aegagrus.CM003241.1                               27407648 15 -  46296322 ---------------------------------------------------------------aaaagtga-aat-a----tg----g-
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589921 15 +  44709034 ---------------------------------------------------------------aaaagtga-aat-a----tg----G-
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           268985 44 +    496798 ta--------------------taa-t-a-----caaatgca--caaaagag-a----a-cacaaaagtGG-AAA-A----TG----gc
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3948 26 +      5315 ----------------------------------------------AAAGAG-A----A-TACCAAACTAA-AAA-G----CA----G-
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 4
s Castor_canadensis.CasCan_scaffold_39952                    20449 19 -     39886 ----------------------------------------------------------A-TTCAAAAGGGG--AA-A----TA----TT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75421 16 -    217609 ---------------------------------------------------------------AAAAGTAA-AAACA----GG----G-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994648 47 +  23392119 ----------------------aaa-t-aaattacaaataca--taaaagag-a----a-cacaaaagtgga-ac-a----ta----gt
i Cavia_aperea.AVPZ01000300.1                            I 2 C 0
s Cavia_porcellus.DS562891.1                               4998090 47 +  23407841 ----------------------aaa-t-aaattacaaataca--taaaagag-a----a-cacaaaagtgga-ac-a----ta----gt
i Cavia_porcellus.DS562891.1                             I 2 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61191 47 -     66877 ----------------------AAA-T-AAATTACAAATACA--TAAAAGAG-A----A-CACAAAAGTGGA-AC-A----TA----GT
i Cavia_tschudii.CavTsc_scaffold_23560                   I 2 C 0
s Cebuella_niveiventris.k141_592277                           3818 44 -     12580 TG--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-G----A-CACAAAGGTGA-AAA-A----TA----GC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41873 44 +     53515 TG--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-G----A-CACAAAGGTGA-AAA-A----TA----GC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369811 44 -  26074798 TG--------------------AAA-T-A-----CAAAGGCA--CAAAAGAC-A----A-CACGAAAGTGG-AAA-A----CA----GC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6700 44 -     34880 TG--------------------AAA-T-A-----CAAAGGCA--CAAAAGAC-A----A-CACGAAAGTGG-AAA-A----CA----GC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65795 44 -     89041 TG--------------------AAA-T-A-----CAAAGGCA--CAAAAGAC-A----A-CACGAAAGTGG-AAA-A----CA----GC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          908 44 -      5494 TA--------------------CAA-T-A-----CAAATGCA--TAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TG----GC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490871 39 -  27778364 ------------------------A-T-A-----CAAACACA--CCAAAGAG-A----A-TACAACAGTAG-AAA-A----CG----G-
i Ceratotherium_simum.JH767749.1                         I 4 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17704 39 +     27315 ------------------------A-T-A-----CAAACACA--CCAAAGAG-A----A-TACAACAGTAG-AAA-A----CG----G-
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 4 I 4
s Cercocebus_atys.KQ010504.1                                139388 44 -   4669795 TA--------------------GAA-T-A-----CAAATGTa--caaaagag-a----a-cacaaaagTGG-AAA-A----TA----GC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43128 44 +     47900 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          42961 44 -     44860 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42944 44 -    148725 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10201 44 -     17524 TA--------------------GAA-T-A-----CAGATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25923 44 -     34525 TA--------------------GAA-T-A-----CAGATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30399 44 -     45857 TA--------------------GAA-T-A-----CAGATGTA--TAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23892 44 +     70610 TA--------------------GAA-T-A-----CAGATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20817 44 +     36323 TA--------------------GAA-T-A-----CAGATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11534 17 -     19938 --------------------------------------------------------------CAAAAGTGG-AAA-A----TG----GT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 19 C 0
s Cheirogaleus_major.k141_666340                             29326 23 -     33796 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-------------------------------------
i Cheirogaleus_major.k141_666340                         C 0 I 18
s Cheirogaleus_medius.k141_759766                             3843 23 -     15404 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-------------------------------------
i Cheirogaleus_medius.k141_759766                        C 0 I 18
s Cheracebus_lucifer.k141_2312002                             7701 44 -     32913 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAGAAGTGG-AAA-A----TA----GC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18114 44 -     40346 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAGAAGTGG-AAA-A----TA----GC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18369 44 +    216457 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAGAAGTGG-AAA-A----TA----GC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18162 44 +     39636 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAGAAGTGG-AAA-A----TA----GC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2747 44 +      5346 TG--------------------AAA-T-A-----CAAATGTG--CAAAAGAT-A----A-CACGAAAGTGG-AAA-A----TA----GC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41249 43 -    112038 T---------------------AAA-T-A-----CAAACGCA--CAAAAGAG-A----A-CATAGAAGTGG-AAA-G----TA----GC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6821 43 +     34062 T---------------------AAA-T-A-----CAAACGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-G----TA----GC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341714 44 +  18827391 TA--------------------GAA-T-A-----CAGATGTA--CAAAAGAG-A----G-CACAAAAGTAG-AAA-A----TA----GC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8259 44 -     44032 TA--------------------GAA-T-A-----CAGATGTA--CAAAAGAG-A----G-CACAAAAGTAG-AAA-A----TA----GC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303039 44 - 135778131 TA--------------------GAA-T-A-----CAGATGTA--CAAAAGAG-A----G-CACAAAAGTAG-AAA-A----TA----GC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10555 47 +     15858 AA-G-----A------------GAA-T-A-----TGTAAGCA--CAAAGAACTA----T-TCCAAAAGTGG-AAA-A----TG----AT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            602131 47 -    839153 AA-G-----A------------GAA-T-A-----TGTAAGCA--CAAAGAACTA----T-TCCAAAAGTGG-AAA-A----TG----AT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407480 44 -   2368649 TA--------------------GAA-T-A-----CGAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377358 44 - 200372422 TA--------------------GAA-T-A-----CGAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                905 44 -     84244 TA--------------------GAA-T-A-----CGAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805942 39 +  53390261 ------------------------C-T-G-----TAGATGCA--CAAAAGAG-A----C-TACAAATGTGG-AAT-A----TG----G-
i Condylura_cristata.JH655891.1                          I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1522 30 -      8242 ----------------------------------------------AAAGAG-G----A-TACAAAAATGG-AAA-A----TGGTACA-
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40942 28 -     83289 --------------------------------------------CAAAGAGA-A----C-CACACATTGAA--AC-A----GG----GT
i Cricetomys_gambianus.CriGam_scaffold_14425             I 10 C 0
s Cricetulus_griseus.LT883664.1                          213113424 10 - 224834208 -------------------------------------------------------------ATACTTTTGT------------------
i Cricetulus_griseus.LT883664.1                          I 40 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129              2992 38 +     87169 ------------------------AAC-A-----TAAATACA--CAAAAGAG-T----A-CATA--AGTAG-AAA-A----TG----A-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643460 45 -   1526836 ----------------------AAA-T-G-----AAAATACA--CAGAAAGG-AAGTCA-CATAAAAGAGG--AC-A----AA----AT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3657 47 +     50838 ----------------------AAA-T-AAAATATAAAAACATAAAAAAC---A----A-TACAAAAGTGGA-AC-A----TG----GA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 2 I 1
s Cuniculus_paca.CunPac_flattened_line_7025                   2578 37 +     36344 ----------------------------------CAAATACA--TAAAAGAG-A----A-CACAAAAGTGGA-AC-A----TT----GT
i Cuniculus_paca.CunPac_flattened_line_7025              I 7 I 1
s Dasyprocta_punctata.DasPun_flattened_line_15900            26330 47 +     75252 ----------------------AAA-T-AAACTACAAATACA--TGAAAGAG-A----A-CACAAAAGTGGA-AC-A----TG----GT
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 2 I 1
s Dasypus_novemcinctus.JH564415.1                          2108857 19 -   2246927 aa------------------aagaa-t-a--t-gcatAAGCA-----------------------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 16
s Daubentonia_madagascariensis.ctg71                        291268 39 +  12879189 TA--------------------GAA-C-A-----CAAATGTA--CAAAAGAG-A----G-CACACAAGTGG-AAA--------------
i Daubentonia_madagascariensis.ctg71                     C 0 I 14
s Delphinapterus_leucas.KZ290073.1                        18624090 15 -  35494412 ---------------------------------------------------------------aaaagtaa-aaa-a----tg----g-
i Delphinapterus_leucas.KZ290073.1                       C 0 I 4
s Desmodus_rotundus.KZ672289.1                            11863397 26 -  20541912 ----------------------------------------------AAAGAG-A----A-TACCAAAATGA-AAA-G----CG----G-
i Desmodus_rotundus.KZ672289.1                           C 0 I 4
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663162 39 -   1390856 ------------------------a-t-a-----taaacaca--caaaagag-A----A-TACAACAGTAG-AAA-A----TG----G-
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 4 I 4
s Diceros_bicornis.DicBicMic_scaffold_5955                  137948 39 -    198055 ------------------------A-T-A-----CAAACACA--CCAAAGAG-A----A-TACAACAGTAG-AAA-A----CA----G-
i Diceros_bicornis.DicBicMic_scaffold_5955               I 4 I 4
s Dinomys_branickii.DinBra_scaffold_10381                    97145 47 -    115145 ----------------------AAA-T-AAAATACAAATACA--TAAAAGAC-A----A-CACAAAAGTGTA-AC-A----TG----TT
i Dinomys_branickii.DinBra_scaffold_10381                I 2 I 1
s Dipodomys_ordii.KN672350.1                              18949005 62 -  37912305 -ATGGTTGTAGTCTATAAATAAGAA-T-G-----CAAATACA--CAA-AGAG-T----G-TATAAAAGTGGA-AT-A----TG----GT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   3952 62 -     10735 -ATGATTGTAGTCTATAAATAAGAA-T-G-----CAAATACA--CAA-AGAG-A----G-TATAAAAGTGGA-AT-A----TG----GT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8605 46 +     14636 ----------------------AAA-T-AAATTACAAATACA--TAAAAGAG-A----A-CACCA-AGTGGA-GC-A----TG----GT
i Dolichotis_patagonum.DolPat_scaffold_80628             I 2 I 1
s Echinops_telfairi.JH980293.1                            62853002 42 - 111700974 AA-G-----A------------GAA-T-A-----CATATTTG--CAAATAACCG----T-TATGAAGTTGC-CAA--------------
i Echinops_telfairi.JH980293.1                           I 224 I 3
s Eidolon_helvum.AWHC01266696.1                               4985 30 +     19438 ----------------------------------------------AAGGAG-A----A-TATAAAAGTGG-AAA-A----TGATAAA-
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238323 15 -    607251 ---------------------------------------------------------------aaaagtaa-aat-a----tg----g-
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107026 47 -  10337057 AA-G-----A------------GAA-T-A-----CACTTGCA--CAAGTAACTA----C-TCAAAAAGTGC-CAA-A----TA----AT
i Elephantulus_edwardii.JH947257.1                       I 872 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29677 31 +    110024 --------------------------T-A-----TACTtaca--caaagaaa-a----t-catatttttga------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 3
s Ellobius_talpinus.LOJH01026522.1                           11652 31 +     18970 --------------------------T-A-----TACTtaca--caaagaaa-a----t-catacttTTGA------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 3
s Enhydra_lutris.KZ291758.1                               24914819 37 +  41312741 ------------------------AAT-A-----CA-ATGCA--CAAAAGAG-T----G-TACA--AGTGG-AAA-A----TG----G-
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                             12577030 24 +  14770903 ----------------------------------------------AAggag-a----a-tacaaaaatga-aaa-g----t-------
i Eptesicus_fuscus.JH977646.1                            C 0 I 2
s Erythrocebus_patas.Contig38                               261237 44 +  21539334 TA--------------------GAA-T-A-----CAGATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63641 15 -    133382 ---------------------------------------------------------------aaaagtta-aaa-a----tg----g-
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 4
s Eubalaena_japonica.EubJap_flattened_line_118172             3857 15 +      7672 ---------------------------------------------------------------AAAAGTAA-AAA-A----TG----G-
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 I 4
s Eulemur_albifrons.k141_51491                               13440 39 -     24895 TA--------------------GAA-T-A-----GAAGTGCA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Eulemur_albifrons.k141_51491                           C 0 I 14
s Eulemur_collaris.k141_601111                               41149 39 -     70999 TA--------------------GAA-T-A-----GAAGTGCA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Eulemur_collaris.k141_601111                           C 0 I 14
s Eulemur_coronatus.k141_384460                              85111 39 +    112731 TA--------------------GAA-T-A-----GAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Eulemur_coronatus.k141_384460                          C 0 I 14
s Eulemur_flavifrons.k141_433119                             41684 39 +     68309 TA--------------------GAA-T-A-----GAAGTGCA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Eulemur_flavifrons.k141_433119                         C 0 I 14
s Eulemur_fulvus.k141_636316                                 52006 39 -     65740 TA--------------------GAA-T-A-----GAAGTGCA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Eulemur_fulvus.k141_636316                             C 0 I 14
s Eulemur_macaco.k141_1562045                                22639 39 -     75513 TA--------------------GAA-T-A-----GAAGTGCA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Eulemur_macaco.k141_1562045                            C 0 I 14
s Eulemur_mongoz.k141_232305                                 46832 39 -     97555 TA--------------------GAA-T-A-----GAAGTGCA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Eulemur_mongoz.k141_232305                             C 0 I 14
s Eulemur_rubriventer.k141_1423786                            3558 39 +     30972 TA--------------------GAA-T-A-----GAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Eulemur_rubriventer.k141_1423786                       C 0 I 14
s Eulemur_rufus.k141_514691                                  41279 39 -     52037 TA--------------------GAA-T-A-----GAAGTGCA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Eulemur_rufus.k141_514691                              C 0 I 14
s Eulemur_sanfordi.k141_1122526                              57683 39 -    111500 TA--------------------GAA-T-A-----GAAGTGCA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Eulemur_sanfordi.k141_1122526                          C 0 I 14
s Felis_catus.CM001381.2                                 186245452 38 - 206538554 ------------------------aat-a-----caaataca--caaaagag-T----A-TACA--AGGGG-AAA-A----TG----G-
i Felis_catus.CM001381.2                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                          185115237 38 - 205367284 ------------------------aat-a-----caaataca--caaaagag-T----A-TACA--AGGGG-AAA-A----TG----G-
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26339 38 -     30238 ------------------------AAT-A-----AAAATACA--CAAAAGAG-T----A-TACA--AGGGG-AAA-A----TG----G-
i Felis_nigripes.FelNig_flattened_line_31944             I 3 C 0
s Galago_moholi.ctg3793                                     123222 39 -    137831 AA--------------------GAA-T-A-----CAAATGTA--CAGAAGAG-A----A-CACAAAATTAG-AAA--------------
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6767 39 +     22493 AA--------------------GAA-T-A-----CAAATGTA--CAGAAGAG-A----A-CACAAAATTAG-AAA--------------
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18818 39 -     32986 AA--------------------GAA-T-A-----CAAATGTA--TAAAAGAG-A----A-CACAAAAGTAG-AAA--------------
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17757 44 +     18121 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TG----GT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90002 15 -     95226 ---------------------------------------------------------------aaaagtaa-aat-a----tg----g-
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32884 42 -     36801 -A--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACTAAGTGGA--AC-A----TG----GT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4222 44 -      8343 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CAGAAAAGTGG-AAA-A----TG----TC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253233 44 - 186649187 ta--------------------gaa-t-a-----caaatgca--caaaagag-a----a-cagaaaagtgG-AAA-A----TG----TC
i Gorilla_gorilla.LT578341.1                             I 76 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     384 24 -     78134 TA--------------------GAA-T-A-----CAGATGCA--CAAAAGAG-A-----------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 16
s Hapalemur_alaotrensis.k141_330369                          13367 39 -     40692 TA--------------------GAA-T-A-----GAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Hapalemur_alaotrensis.k141_330369                      C 0 I 14
s Hapalemur_gilberti.k141_646465                             34768 39 +     49394 TA--------------------GAA-T-A-----GAAATGCA--CAAAAGAG-A----A-CACAAAAGTAG-AGA--------------
i Hapalemur_gilberti.k141_646465                         C 0 I 14
s Hapalemur_griseus.k141_763500                              59637 39 -     66874 TA--------------------GAA-T-A-----GAAATGCA--CAAAAGAG-A----A-CACAAAAGTAG-AGA--------------
i Hapalemur_griseus.k141_763500                          C 0 I 14
s Hapalemur_meridionalis.k141_258450                          8510 39 -     42923 TA--------------------GAA-T-A-----GAAATGCA--CAAAAGAG-A----A-CACAAAAGTAG-AGA--------------
i Hapalemur_meridionalis.k141_258450                     C 0 I 14
s Hapalemur_occidentalis.k141_578367                         15510 39 -     53142 TA--------------------GAA-T-A-----GAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Hapalemur_occidentalis.k141_578367                     C 0 I 14
s Helogale_parvula.HelPar_flattened_line_2585                29478 38 -    327341 ------------------------AAC-A-----CAAATACA--CAAAAGAG-C----A-CACC--AGTGG-AAA-A----TG----G-
i Helogale_parvula.HelPar_flattened_line_2585            I 3 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7755 15 +     48891 ---------------------------------------------------------------AAAAGTAA-AAT-A----TG----G-
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925757 30 -  22651954 -----------------------------------------a--caaaagAG-A----A-CACAAAAGTGGA-AA-G----TG----TT
i Heterocephalus_glaber.JH602082.1                       I 40 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6354 15 -     36432 ---------------------------------------------------------------AAAAGTAA-AAA-A----TG----G-
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 4
s Hipposideros_galeritus.HipGal_scaffold_23202               49507 30 +     49977 ----------------------------------------------AAAGAG-A----G-CACAAAAACAG-AAA-A----TGGTGAG-
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141222 44 -    630532 TA--------------------CAA-T-A-----CAAATGCA--CTAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68171 35 +     83186 ------------------------AAC-A-----CAAATACA--CA--AGAG-T----A-CGC---AGTGG-AAA-A----TG----G-
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 3 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70030 47 +    143317 ----------------------AAA-T-AAATTACAAATACA--TAAAAGAG-G----A-TACAAAAGTAGA-GC-A----TG----GT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 2 I 1
s Hylobates_agilis.k141_1155965                               4256 44 +     12352 TA--------------------CAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAGGTGG-AAA-A----TA----GC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11439 44 +     55766 TA--------------------CAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAGGTGG-AAA-A----TA----GC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051035 44 + 191637585 TA--------------------CAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799913 44 +  11177569 TA--------------------CAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385453 43 +   7955117 aa--------------------gaa-t-g-----caaatgcA--GAAAAGCG-A----G-CACAAAATGGA--AT-A----TG----GT
i Ictidomys_tridecemlineatus.JH393364.1                  I 16 C 0
s Indri_indri.k141_2415743                                    1019 39 +     11955 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA--------------
i Indri_indri.k141_2415743                               C 0 I 14
s Inia_geoffrensis.IniGeo_flattened_line_69447                1877 15 -     16823 ---------------------------------------------------------------AAAAGTAA-AAA-A----TG----G-
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 4
s Jaculus_jaculus.JH725527.1                               1237859 32 +   9596543 --------------------------T-A-----TAAATGTA---AAAGAGA-A----G-CTGAAAGTGGA--GC--------------
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_3970                 64366 15 -     97402 ---------------------------------------------------------------AAAATTAA-AAA-A----TG----G-
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 4
s Lagothrix_lagothricha.k141_246028                          41970 44 +    110728 ta--------------------aaa-t-a-----caaatgca--caaaagat-a----a-cacaaaagtgg-aaa-a----ta----gc
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60496 24 -     65777 ----------------------------------------------AAGCAG-A----A-TACAAAAATGA-AAA-G----T-------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 2
s Lemur_catta.scaffold_24                                 14758159 39 +  30322482 TA--------------------GAA-C-A-----GAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Lemur_catta.scaffold_24                                C 0 I 14
s Leontocebus_fuscicollis.k141_2994775                        2883 44 -     13097 TG--------------------AAA-T-A-----CAAATGCG--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2638 44 +      5940 TG--------------------AAA-T-A-----CAAATGCG--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2468 44 -      5717 TG--------------------AAA-T-A-----CAAATGCG--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8835 44 -     11567 TG--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-A----A-CACAAAAGTAG-GAA-A----TA----GC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10216 44 -     12945 TG--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-A----A-CACAAAAGTAG-GAA-A----TA----GC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7688 39 +     29618 TA--------------------GAA-T-A-----CAAATGGA--CAAAAGAG-A----A-CACAAAAGTGG-AAA--------------
i Lepilemur_ankaranensis.k141_567626                     C 0 I 14
s Lepilemur_dorsalis.k141_387009                              7685 38 +     31569 TA--------------------GAA-T-A-----CAAATGAA--CAAAAGAG-A----A-CACAAAAGTGG--AA--------------
i Lepilemur_dorsalis.k141_387009                         C 0 I 14
s Lepilemur_ruficaudatus.k141_330196                          7696 39 +     24756 TA--------------------GAA-T-A-----CAAATGAA--CAAAAGAG-A----A-CACAAAAGTGG-AAA--------------
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 14
s Lepilemur_septentrionalis.k141_360456                       7694 39 +     16388 TA--------------------GAA-T-A-----CAAATGAA--CAAAAGAG-A----A-CACAAAAGTGG-AAA--------------
i Lepilemur_septentrionalis.k141_360456                  C 0 I 14
s Leptonychotes_weddellii.KB714746.1                        812212 39 -   3914936 ------------------------AAT-A-----CAAATGCA--CAAAAGAG-T----ATTACA--AGTGG-AAA-A----TG----G-
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16545 44 +     24238 TA--------------------AAA-T-A-----AAGATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAG-A----CA----GT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333400 15 +    662738 ---------------------------------------------------------------aaaagtaa-aaa-a----tg----g-
i Lipotes_vexillifer.KE559953.1                          C 0 I 4
s Lophocebus_aterrimus.ctg367                               331341 44 -   1826925 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            8980 39 +     19643 CA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAATAGTAG-AAA--------------
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042641 39 -   6120653 CA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAATAGTAG-AAA--------------
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079703 47 +  43346337 aa------------------gagaa-t-a-----catatgca--caaataacta----t-tgcaaaagtgg-taa-a----ca----gt
i Loxodonta_africana.GL010049.1                          I 568 C 0
s Lycaon_pictus.CM007581.1                                41613359 36 +  59628241 ------------------------aaa-a-----caaatg----caaaagaa-t----a-tacA--TGTGG-AAA-A----TG----G-
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_1757516                              43658 44 -     61512 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371319 44 -  60120075 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23574 44 +     30207 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20677 44 -     24934 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23526 44 +     30527 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34715 44 -     50087 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44486 44 +     51645 TA--------------------GAA-T-A-----CAAACGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413655 44 - 187317192 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397878 44 +  25927173 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47042 44 -     62418 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23697 44 +     24253 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43517 44 +     59329 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269445 44 +    668171 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20632 44 +     21031 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 1229 44 +     17132 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221948 30 -    270270 ----------------------------------------------AAAGGG-A----A-TATAAAAGTGG-AAA-A----TGATAAG-
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320729 44 +  24302211 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355561 44 -    752769 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672250 40 -    737560 ------------------------aat-a-----taaatgca--caaaagag-a----a-tacaaaagtgg-aaa-a----tg----g-
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219537 40 +    317179 ------------------------aat-g-----taaatgca--caaaagag-a----g-tacaaaagtgg-aaa-a----tg----g-
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499677 43 +  40650429 aa--------------------gaa-t-g-----caaatgcA--GAAAAGCG-A----G-CACAAAACGGA--AT-A----TG----GT
i Marmota_marmota.CZRN01000018.1                         I 16 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149104 30 +    207569 ----------------------------------------------AAAGAG-A----C-TAAAAAAGTGG-AAG-A----TGGTAAG-
i Megaderma_lyra.MegLyr_scaffold_4542                    I 22 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24718 26 -     74585 --------------------------------------------CAAAAGAG-T----A-TACA--AGTGG-AAA-A----TG----G-
i Mellivora_capensis.MelCap_flattened_line_19308         I 15 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47299 18 -    140813 ------------------------------------------------------------CATACATTGAA--AC-A----ag----at
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 550
s Mesocricetus_auratus.KB708134.1                         17427974 10 +  29670104 -------------------------------------------------------------ATACATTTGA------------------
i Mesocricetus_auratus.KB708134.1                        I 5 I 3
s Mesoplodon_bidens.MesBid_scaffold_6114                     79944 15 +     93471 ---------------------------------------------------------------AAAAGTAA-AAA-A----TG----G-
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 4
s Mico_argentatus.k141_582562                                 9009 44 +     17804 TG--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-G----A-CACAAAGGTGA-AAA-A----TA----GC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9511 44 -     12984 TG--------------------AAA-T-A-----CAAATGCA--CAAAAGAT-G----A-CACAAAGGTGA-AAA-A----TA----GC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17825 44 -     26561 TG--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-G----A-CACAAAGGTGA-AAA-A----TA----GC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983300 39 +  93316391 CA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA--------------
i Microcebus_murinus.CM007674.1                          C 0 I 14
s Microgale_talazaci.MicTal_scaffold_6613                    44097 42 +    145209 AA-G-----A------------GAA-G-A-----TGTCTTTG--CAAATAAGCA----T-TACGGAGTGGC-AAG--------------
i Microgale_talazaci.MicTal_scaffold_6613                I 223 I 3
s Micronycteris_hirsuta.MicHir_scaffold_2233                183338 26 +    200668 ----------------------------------------------AAAGAG-A----A-TACCAAAATGA-AAA-G----CG----G-
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 4
s Microtus_ochrogaster.CM001695.1                         15961089 31 +  27267610 --------------------------T-G-----TACTTACA--CAAAGAAA-A----C-CGTACTTTTGa------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 3
s Miniopterus_natalensis.LDJU01000034.1                    6361436 26 -   8254450 ----------------------------------------------AAagag-a----a-tacaaaaatga-aaa-g----tg----g-
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 4
s Miniopterus_schreibersii.MinSch_scaffold_23309             40337 26 -     48117 ----------------------------------------------AAAGAG-A----A-TACAAAAATGA-AAA-G----TG----G-
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 4
s Miopithecus_ogouensis.k141_1534655                         20740 44 -     27822 TA--------------------GAA-T-A-----CAGATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7219 39 +     27589 ------------------------AAT-A-----CAAATGCA--CAAAAGAG-T----ATTACA--AGTGG-AAA-A----TG----G-
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 3 C 0
s Mirza_zaza.k141_766280                                     51089 39 -     62432 CA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA--------------
i Mirza_zaza.k141_766280                                 C 0 I 14
s Monodon_monoceros.MonMon_M_scaffold_103                   351833 15 +    437263 ---------------------------------------------------------------AAAAGTAA-AAA-A----TG----G-
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 4
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177498 26 +    366855 ----------------------------------------------AAAGAG-A----A-TCCAAAAATGA-AAA-G----TG----G-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 4
s Moschus_moschiferus.MosMos_scaffold_13123                  22907 15 -     82753 ---------------------------------------------------------------AAAAGTAA-AAT-A----TG----G-
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17231 38 -     63510 ------------------------AAC-A-----CAAATACA--CAAAAGAG-T----A-TGCA--AGTGG-AAA-A----TG----G-
i Mungos_mungo.MunMun_flattened_line_18455               I 3 C 0
s Murina_feae.MurFea_scaffold_17764                          37377 24 +     47283 ----------------------------------------------AAGGAG-A----A-TACCGAAATGA-AAA-G----T-------
i Murina_feae.MurFea_scaffold_17764                      C 0 I 2
s Mus_caroli.LT608237.1                                   35591717 17 + 120012414 ------------------------------------------------------------ca-ACATTTAA--AG-A----Ag----gt
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686076 17 + 129401213 ------------------------------------------------------------CA-ACATTGAA--AG-A----AG----gt
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58215963 17 +  89631738 ------------------------------------------------------------CA-ATACTGAA--AG-A----AG----gt
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495396 17 + 130317789 ------------------------------------------------------------CA-ACATTGAA--AG-A----Ag----gt
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81469 43 -     86153 TA--------------------GAA-T-A-----CAAATGCA--CAAAGGAG-A----A-CACAAAGTGGA--AC-A----CA----GT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353855 36 +  14710649 ------------------------AAT-A-----CAAATGCA--CA--AGAG-T----A-TACA--AGTGG-AAA-A----TG----G-
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myotis_brandtii.KE162005.1                               9791427 24 +  10118263 ----------------------------------------------AAGGAG-A----A-TACCAAAATGA-AAA-G----T-------
i Myotis_brandtii.KE162005.1                             C 0 I 2
s Myotis_davidii.KB100139.1                                4385787 24 +   6019432 ----------------------------------------------AAGGAG-A----A-TACCAAATTGA-AAA-G----T-------
i Myotis_davidii.KB100139.1                              C 0 I 2
s Myotis_lucifugus.GL429869.1                               381609 24 +   4330536 ----------------------------------------------AAGGAG-A----A-TACCAAAATGA-AAA-G----T-------
i Myotis_lucifugus.GL429869.1                            C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_66571                          436 24 +     18357 ----------------------------------------------AAGGAG-A----A-TACCAAAATGA-AAA-G----T-------
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118289 46 +    130748 AA-G-----A------------GAA-T-A-----CAT-AGCT--CAAAGAACTG----T-TGCAAAAGTGG-CAA-A----TG----AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             944794  4 +   3037898 ---------------------------------------------------------------------------------GG----GT
i Nannospalax_galili.KL204047.1                          N 0 C 0
s Nasalis_larvatus.k141_1350636                              27408 44 +     34575 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467815 39 -  31847680 ------------------------AAT-A-----CAAATGCA--CAAAAGAG-T----ATTACA--AGTGG-AAA-A----TG----G-
i Neomonachus_schauinslandi.NINY01007730.1               I 3 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226002 15 -   7148211 ---------------------------------------------------------------aaaagtaa-aaa-a----tg----g-
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 4
s Noctilio_leporinus.NocLep_scaffold_7894                   126290 23 -    149072 -------------------------------------------------GAG-A----C-TCCAAAAATGG-AAA-G----TG----G-
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52145 44 -    132029 TA--------------------CAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8240 44 -     16345 TA--------------------CAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14125 44 +     22201 TA--------------------CAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412346 44 -  22158432 TA--------------------CAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24523 44 -     54323 TA--------------------CAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196956 36 +   9404916 ------------------------aaa-a-----caaatg----caaaagaa-t----a-tacA--TGTGG-AAA-A----TG----G-
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 39 C 0
s Nycticebus_bengalensis.LG01                             93634978 39 + 196305487 CA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAATAGTAG-AAA--------------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1736 39 -      3937 CA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAATAGTAG-AAA--------------
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563217 39 - 199412804 CA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAATAGTAG-AAA--------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549913 36 -   3988456 ----------------------------------aaaatgtt--gaaaaca--a----a-cATGGAAGTGG-AAG-G----TG----GG
i Ochotona_princeps.JH802162.1                           I 36 C 0
s Octodon_degus.JH651603.1                                11046180 45 -  11899542 ----------------------aaa-t-aaaatataaaaaca--aaaaag---a----a-tacaaaagtggA-AC-A----TG----GT
i Octodon_degus.JH651603.1                               I 2 I 1
s Odobenus_rosmarus.KB229312.1                             1450412 39 +   2017862 ------------------------AAT-A-----CAAATGCA--CAGAAGAG-T----ATTATG--AGTGG-AAA-A----TG----G-
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Odocoileus_virginianus.KZ100018.1                         434894 15 -    630418 ---------------------------------------------------------------aaaagtaa-aat-a----tg----g-
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12886 15 +    150152 ---------------------------------------------------------------aaaagtaa-aat-a----tg----g-
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91448 31 -    140218 --------------------------T-A-----TACTTACA--CAAAGAAA-A----C-CATACTTTTGA------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_28377                    2307 31 -     41509 --------------------------T-A-----TACATATA--CAAAGAGA-A----C-CATACATTTGA------------------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 3
s Orcinus_orca.KB316932.1                                  8095272 15 +  10937097 ---------------------------------------------------------------aaaagtaa-aaa-a----tg----g-
i Orcinus_orca.KB316932.1                                C 0 I 4
s Orycteropus_afer.OryAfe_flattened_line_171931              12335 47 -     14239 AA-G-----A------------GAA-T-A-----TAGAAGCA--CAAATAACTA----T-TACAAAAATGG-CAA-A----TA----GT
i Orycteropus_afer.OryAfe_flattened_line_171931          I 232 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102379 42 - 174332312 ----------------------aaa-c-a-----aagatgtg--cAAAAGAG-A----A-CACAAAAGTGG-Aag-a----ca----gt
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        37998 36 +    559221 ------------------------aaa-a-----cagata----caAAAGAA-T----A-TACA--TGTGG-AAA-A----TG----G-
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 C 0
s Otolemur_crassicaudatus.k141_649260                        38375 39 -     51505 AA--------------------GAA-T-A-----CAAATGTA--CAGAAGAG-A----A-CACAAAATTAG-AAA--------------
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351378 39 +   1103335 aa--------------------gaa-t-a-----caaatgta--CAGAAGAg-a----a-cacaaaattag-aaa--------------
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402875 15 -  44047080 ---------------------------------------------------------------aaaagtaa-aat-a----tg----g-
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3394 15 +     17875 ---------------------------------------------------------------AAAAGTAA-AAT-A----TG----G-
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471238 44 - 189151597 TA--------------------GAA-T-A-----CAAATGca--caaaagag-a----a-cagaaaagtgG-AAA-A----TG----TC
i Pan_troglodytes.CM009242.2                             I 76 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23160 38 -    230217 ------------------------AAC-A-----CAAATACA--CAAAAGAG-T----A-TACA--AGGGG-AAA-A----TG----G-
i Panthera_onca.PanOnc_flattened_line_3271               I 3 C 0
s Panthera_pardus.KV860321.1                              18460486 38 -  18783137 ------------------------aac-a-----caaataca--caaaagag-T----A-TACA--AGGGG-AAA-A----TG----G-
i Panthera_pardus.KV860321.1                             I 3 C 0
s Panthera_tigris.KE722367.1                               3971206 38 +   8748460 ------------------------aat-a-----caaataca--caaaagag-T----A-TACA--AGGGG-AAA-A----TG----G-
i Panthera_tigris.KE722367.1                             I 3 C 0
s Pantholops_hodgsonii.KE114653.1                          1614318 15 +   2937107 ---------------------------------------------------------------aaaagtaa-aat-a----tg----g-
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   241569 44 - 183742232 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8033 44 +     21308 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  289091 25 -  20919399 ------------------------------------------------AGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Papio_hamadryas.Contig39                               I 19 I 1538
s Papio_kindae.k141_2214839                                  20688 44 -     27687 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13824 44 +     16796 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20634 44 -     23640 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13799 38 +     78924 ------------------------ACT-A-----CGAATACA--CAAAAGAG-T----A-TATA--AGTGG-AAA-A----TG----G-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 C 0
s Perodicticus_ibeanus.k141_1921260                          24661 39 +     31479 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTAG-AAA--------------
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17025 39 -     24908 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTAG-AAA--------------
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         357 62 +      9367 -ATGGTTGTATTCTATAAATTAGAG-C-A-----CAACTATA--TAA-AAAG-A----G-TATAAAAGTAGA-AT-A----TG----GT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245532 31 +  18517816 --------------------------t-a-----tacataca--caaagaga-a----C-TATACATTTga------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 3
s Petromus_typicus.PetTyp_scaffold_17301                     30630 30 -     56120 -----------------------------------------A--GATAAGAG-T----A-CACAAAAGCAGA-AA-A----TA----CG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 1
s Phocoena_phocoena.PhoPho_flattened_line_46867              11130 15 -     15039 ---------------------------------------------------------------AAAAGTAA-AAA-A----TG----G-
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 I 4
s Piliocolobus_badius.k141_2704958                             852 44 +     55023 TA--------------------GAA-T-A-----CAAATGTA--CAGAAGAG-A----A-CACAAAAGTGG-AAA-A----TG----GC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          403 44 -     89929 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TG----GC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                             991 44 +     40849 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TG----GC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252658 44 +  14605196 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TG----GC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1555 24 +     22231 ----------------------------------------------AAGGAG-A----A-TACAAAAATGA-AAA-G----T-------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 2
s Pithecia_albicans.k141_1239476                             63607 44 +    207309 TA--------------------AAA-T-A-----CAAAGGCA--CAAAAGAG-A----A-CACAAGAGTGG-AAA-A----TA----GC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4701 44 -     25401 TA--------------------AAA-T-A-----CAAAGGCA--CAAAAGAG-A----A-CACAAGAGTGG-AAA-A----TA----GC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30442 44 +     58159 TA--------------------AAA-T-A-----CAAAGGCA--CAAAAGAG-A----A-CACAAGAGTGG-AAA-A----TA----GC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30718 44 +     63561 TA--------------------AAA-T-A-----CAAAGGCA--CAAAAGAG-A----A-CACAAGAGTGG-AAA-A----TA----GC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30481 44 +     51148 TA--------------------AAA-T-A-----CAAAGGCA--CAAAAGAG-A----A-CACAAGAGTGG-AAA-A----TA----GC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555448 44 -   4542175 TG--------------------AAA-T-A-----CAAAGGCA--CAAAAGAG-A----A-CACAAGAGTGG-AAA-A----TA----GC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30465 44 +     51125 TA--------------------AAA-T-A-----CAAAGGCA--CAAAAGAG-A----A-CACAAGAGTGG-AAA-A----TA----GC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3214 15 -      8168 ---------------------------------------------------------------AAAAGTAA-AAA-A----TG----G-
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 I 4
s Plecturocebus_bernhardi.k141_2549090                        6869 44 +     39866 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAGAAGTGG-AAA-A----TA----GC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1954 44 -      9282 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAGAAGTGG-AAA-A----TA----GC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41358 44 -     87950 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAGAAGTGG-AAA-A----TA----GC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41751 44 -     88961 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAGAAGTGG-AAA-A----TA----GC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6450 44 -     39403 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAGAAGTGG-AAA-A----TA----GC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41402 44 +     87928 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAGAAGTGG-AAA-A----TA----GC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6447 44 -     60166 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAGAAGTGG-AAA-A----TA----GC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13383 44 -     67232 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAGAAGTGG-AAA-A----TA----GC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41299 44 -     90634 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAGAAGTGG-AAA-A----TA----GC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42767 44 +     89403 TA--------------------AAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAGAAGTGG-AAA-A----TA----GC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176364 44 - 189387572 ta--------------------gaa-t-a-----caaatgca--caaaagag-a----a-cagaaaagtgG-AAA-A----TG----TC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191182 44 -   9816681 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CAGAAAAGTGG-AAA-A----TG----TC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              25988 44 +     69807 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43183 44 -     80239 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981314 39 +   4620579 ta--------------------gaa-t-a-----gaaatgcA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Prolemur_simus.MPIZ01000396.1                          C 0 I 14
s Propithecus_coquerelli.NW_012148875.1                    1564780 39 -   2598838 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGCGG-AAA--------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 14
s Propithecus_coronatus.k141_209299                           2416 39 -      7103 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGCAG-AAA--------------
i Propithecus_coronatus.k141_209299                      C 0 I 14
s Propithecus_diadema.k141_153680                             3013 39 -     11706 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA--------------
i Propithecus_diadema.k141_153680                        C 0 I 14
s Propithecus_edwardsi.k141_635656                            6749 39 -     30655 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA--------------
i Propithecus_edwardsi.k141_635656                       C 0 I 14
s Propithecus_perrieri.k141_1496898                          33074 39 +     46564 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA--------------
i Propithecus_perrieri.k141_1496898                      C 0 I 14
s Propithecus_tattersalli.k141_1127767                       93345 39 -     98465 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA--------------
i Propithecus_tattersalli.k141_1127767                   C 0 I 14
s Propithecus_verreauxi.k141_1047036                          6982 39 +     35169 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGCGG-AAA--------------
i Propithecus_verreauxi.k141_1047036                     C 0 I 14
s Psammomys_obesus.NESX01036366.1                            34843 18 +     52041 ------------------------------------------------------------CATACATTGAA--AC-A----AG----AT
i Psammomys_obesus.NESX01036366.1                        C 0 I 579
s Pteronotus_parnellii.KE847780.1                            50380 26 -     66298 ----------------------------------------------aatgaa-a----a-tacaaaaatga-aaa-g----tg----g-
i Pteronotus_parnellii.KE847780.1                        C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3420 38 -     18639 ------------------------AAT-A-----CAAATGCA--CAAAAGAG-T----G-TACA--AGTGG-AAA-A----TG----G-
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 3 C 0
s Pteropus_alecto.KB030862.1                               5839635 30 -  28871421 ----------------------------------------------aaagag-a----a-tataaaagtgG-AAC-A----TGATAAA-
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536144 30 -   4952924 ----------------------------------------------aaagag-a----a-tataaaagtgg-aaa-a----tgaTAAG-
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097800 38 +  38429054 ------------------------aat-a-----caaataca--caaaagag-T----A-TATA--AGGGG-AAA-A----TG----G-
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                             25363 44 +     91421 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151856 44 -   7812017 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6233 44 +     72585 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51815 15 +     55069 ---------------------------------------------------------------AAAAGTAA-AAT-A----TG----G-
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021320 18 -  90668790 ------------------------------------------------------------CAAACATTGAA--AC-a----ag----at
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913523 30 +   3329780 ----------------------------------------------aaagag-a----a-cacaaaaatag-aaa-a----tggtaaG-
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            27173 44 +     27361 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120540 44 + 195417433 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----a-cacaaaagtga-aaa-a----ta----gC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234781 44 -   7961872 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73557 30 -    116970 ----------------------------------------------AAAGAG-A----A-TATAAAAGTGG-GAA-A----TGATAAG-
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2745 44 +     27962 TG--------------------AAA-T-A-----CAAATGTG--CAAAAGAT-A----A-CACGAAAGTGG-AAA-A----TA----GC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2640 44 +      6077 TG--------------------AAA-T-A-----CAAATGCG--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2732 43 +      5971 TG--------------------AAA-T-A-----CAAATGCG--CAAAAGAT-A----A-CACAAA-GTGG-AAA-A----CA----GC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2674 43 +      5932 TG--------------------AAA-T-A-----CAAATGCG--CAAAAGAT-A----A-CACAAA-GTGG-AAA-A----CA----GC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                               997 43 -      4390 TG--------------------AAA-T-A-----CAAATGCG--CAAAAGAT-A----A-CACAAA-GTGG-AAA-A----CA----GC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390429 44 - 209938924 TG--------------------AAA-T-A-----CAAATGTG--CAAAAGAT-A----A-CACGAAAGTGG-AAA-A----TA----GC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2622 43 +      5979 TG--------------------AAA-T-A-----CAAATGCG--CAAAAGAT-A----A-CACAAA-GTGG-AAA-A----CA----GC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3363 44 -      4301 TG--------------------AAA-T-A-----CAAATGCG--CAAAAGAT-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6468 15 +     16473 ---------------------------------------------------------------AAAAGTAA-ACT-A----TG----G-
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107774 38 + 121099817 ----------------------------A-----CAAATGCA--CAAAAGAT-A----A-CACGAAAGTGG-AAA-A----GA----GC
i Saimiri_boliviensis.NW_024100920.1                     I 1 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29336 38 -     47369 ----------------------------A-----CAAATGCA--CAAAAGAT-A----A-CACGAAAGTAG-AAA-A----GA----GC
i Saimiri_cassiquiarensis.k141_1467335                   I 1 C 0
s Saimiri_macrodon.k141_1173117                              29725 38 -     79414 ----------------------------A-----CAAATGCA--CAAAAGAT-A----A-CACGAAAGTGG-AAA-A----GA----GC
i Saimiri_macrodon.k141_1173117                          I 1 C 0
s Saimiri_oerstedii.k141_245838                              26417 38 -     34454 ----------------------------A-----CAAATGCA--CAAAAGAT-A----A-CACGAAAGTGG-AAA-A----GA----GC
i Saimiri_oerstedii.k141_245838                          I 1 C 0
s Saimiri_sciureus.k141_1467173                              13823 38 -     22428 ----------------------------A-----CAAATGCA--CAAAAGAT-A----A-CACGAAAGTGG-AAA-A----GA----GC
i Saimiri_sciureus.k141_1467173                          I 1 C 0
s Saimiri_ustus.k141_360372                                  28968 38 -     47109 ----------------------------A-----CAAATGCA--CAAAAGAT-A----A-CACGAAAGTAG-AAA-A----GA----GC
i Saimiri_ustus.k141_360372                              I 1 C 0
s Sapajus_apella.ctg103                                     237030 44 +   5703754 TG--------------------AAA-T-A-----CAAAGGCA--CAAAAGAC-A----A-CACGAAAGTGG-AAA-A----CA----GC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6620 44 +     21866 TG--------------------AAA-T-A-----CAAAGGCA--CAAAAGAC-A----A-CACGAAAGTGG-AAA-A----CA----GC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114732 39 +    313613 ------------------------C-T-A-----TACATGCA--CAAAAGAG-A----A-TATAAATGTGG-AAT-A----TG----G-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 C 0
s Semnopithecus_entellus.k141_158471                         23680 44 +     27374 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27199 44 +     58920 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13695 44 -     45317 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21353 44 -     42441 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CAGAAAAGTGA-AAA-A----TA----GC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24033 44 -     29113 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27102 44 -     48123 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47749 30 +     77746 --------------------------T-A-----TACATACA--CAAA-AGA-A----A-CAGACATTTGA------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_126            1857048 40 -   1910179 ------------------------C-AAA-----GAGGTGTA--CAAAGGAG-A----C-AACGAAAGTGG-AAA-A----TG----G-
i Solenodon_paradoxus.SolPar_flattened_line_126          I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1867035 43 +   3870691 aa--------------------gaa-t-g-----caaatgca--GAAAAGCG-A----G-CACAAAATGGA--AT-A----TA----GT
i Spermophilus_dauricus.KZ294078.1                       I 16 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5190 36 -     97271 ------------------------AAT-G-----CATATGCA--CA--AGAG-T----A-TACA--AGTGG-AAA-A----TG----G-
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 6 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123638 38 +    196729 ------------------------AAC-A-----CAAATACA--CAAAAGAG-T----A-TGCA--AGTGG-AAA-A----TG----G-
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 C 0
s Sus_scrofa.CM000828.4                                    6639884 15 +  69701581 ---------------------------------------------------------------aaaagtaa-aaa-a----gg----g-
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389605 44 +   1523678 TA--------------------CAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12361 26 +     22964 ----------------------------------------------AAAGAG-A----A-TATAAAAATGA-AAA-G----TG----G-
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 4
s Tamandua_tetradactyla.TamTet_scaffold_224794                1405 46 +      5583 AA-G-----A------------GAA-T-A-----CAT-AGCT--CAAAGAACTG----T-TGCAAAAGTGG-CAA-A----TG----AT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190324 39 +    199430 ------------------------A-T-A-----CAAATGCA--CAAAAGAG-A----A-TACAACAGTGG-AAA-A----CG----G-
i Tapirus_indicus.TapInd_scaffold_7432                   I 4 I 4
s Tapirus_terrestris.TapTer_scaffold_755                    104275 39 -    539355 ------------------------A-T-A-----CAAATGCA--CAAAAGAG-A----A-TACAACAGTGG-AAA-A----CG----G-
i Tapirus_terrestris.TapTer_scaffold_755                 I 4 I 4
s Tarsius_lariang.k141_1780720                                5617 44 +      6850 TA--------------------GAA-T-A-----CGAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TG----GC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5665 44 +     20590 TA--------------------GAA-T-A-----CGAATGCA--CAAAAGAG-A----A-CACAAAAGTAG-AAA-A----TG----GC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351555 44 - 186847797 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGG-AAA-A----TA----GC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              22983 37 -     33621 ----------------------------------CAAATATA--CAAAAGAG-T----A-CACAGCAGTGGA-AC-A----TC----CT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 7 I 1
s Tonatia_saurophila.TonSau_scaffold_294                    478404 26 -    610378 ----------------------------------------------AAAGAG-A----A-TACCAAAATAA-AAA-G----CA----G-
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 4
s Tolypeutes_matacus.TolMat_scaffold_31955                   18550 19 -     31044 AA-G-----A------------GAA-T-A---AACATAAGCA-----------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 17
s Trachypithecus_auratus.k141_1189070                        19244 44 +     26378 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31908 44 -     78344 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18565 44 +     25722 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26859 44 -     62838 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26907 44 +     46913 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7713 44 -     28527 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28798 44 -     64340 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26835 44 -     63452 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8278 44 +     22490 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1706 44 -      6147 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8611 44 -     13050 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253850 44 -   6242583 TA--------------------GAA-T-A-----CAAATGTA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59601 44 +     59866 TA--------------------GAA-T-A-----CAAATGCA--CAAAAGAG-A----A-CACAAAAGTGA-AAA-A----TA----GC
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172081 19 -    200418 ---------------------------------------------------------------AAAAGTCA-AAA-ACAGTAG----G-
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479152 46 -  10818551 aa------------------gagaa-t-a-----cataggca--caaataacta----t-tgcaaaggtg--taa-a----ta----gt
i Trichechus_manatus.JH594705.1                          I 186 C 0
s Tupaia_chinensis.KB320699.1                              1832572 44 -   4065304 CG--------------------GAA-T-G-----CGAATGCA--CAAATGAT-A----A-CACAAACGTGG-AAA-A----CA----GT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6888 44 -     70247 TG--------------------GAA-T-G-----CAAATGCA--CAAACAAT-A----A-CACAAACATGG-AAA-A----CA----GT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360011 15 -  33153633 ---------------------------------------------------------------aaaagtaa-aaa-a----tg----g-
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 4
s Uropsilus_gracilis.UroGra_scaffold_46687                     933 37 -     21056 ------------------------C-T-A-----TAGATACA--C--AAGAG-A----A-TACAAAAAAGT-AGA-A----TG----G-
i Uropsilus_gracilis.UroGra_scaffold_46687               I 3 C 0
s Ursus_maritimus.KK499267.1                                180572 38 +   5085361 ------------------------AAT-A-----CAAATGCG--CAAAAGAA-T----A-TACA--AGTAG-AAA-A----TG----G-
i Ursus_maritimus.KK499267.1                             I 3 C 0
s Varecia_rubra.k141_787544                                  23958 39 -     30710 TA--------------------GAA-T-A-----GAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Varecia_rubra.k141_787544                              C 0 I 14
s Varecia_variegata.k141_289850                              22865 39 -    147434 TA--------------------GAA-T-A-----GAAATGCA--CAAAAGAG-A----A-CACAAAAGTGG-AGA--------------
i Varecia_variegata.k141_289850                          C 0 I 14
s Vicugna_pacos.KN270157.1                                   75090 15 +   5488506 ---------------------------------------------------------------ataagcaa-aaa-a----tg----g-
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103720 36 -    112863 ------------------------AAA-A-----CAAATG----CAAAAGAA-T----A-TACA--TGTGG-AAA-A----TG----G-
i Vulpes_lagopus.VulLag_flattened_line_12041             I 3 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172813 43 -    224448 TA--------------------GAA-T-G-----CACATGCA--GAAAAGAG-A----G-CACAAAATGGA--AT-A----TG----GT
i Xerus_inauris.XerIna_scaffold_2302                     I 16 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27610 39 -     86975 ------------------------AAT-A-----CAAATGCA--CAGAAGAG-T----ATTATG--AGTGG-AAA-A----TG----G-
i Zalophus_californianus.ZalCal_flattened_line_17732     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_211135                      2110 33 +      3117 --------------------------T-A-----TAAATGCA--CAAAGAGA-A----G-CTGAAAGTGGA--AC--------------
i Zapus_hudsonius.ZapHud_scaffold_211135                 I 692 I 10
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751  0 -    498745 C
e Equus_caballus.CM000403.2                               21373965  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041  0 -   4378816 C
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3927 8 +     36723 aagt----aaca
s Acinonyx_jubatus.LLWD01001279.1                           811577 6 +   1699592 ---TAAGTG---
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18749 4 +     63021 A-AT----T---
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414104 6 +  29979442 ---TAAGTG---
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214202 6 +    347723 ---TAAGTG---
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16708 4 -     61208 T-GA----T---
i Allactaga_bullata.AllBul_scaffold_20030                I 1 I 2
s Allenopithecus_nigroviridis.k141_3755588                   46253 8 +     53615 AAGT----AACA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42197 8 +     44087 AAGT----AACA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14835 8 -     21945 AAGT----AACA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16507 8 +     32033 AAGT----AACA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70960 8 -     84148 AAGT----GACG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43193 8 -     78289 AAGT----GACG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42639 8 +     55831 AAGT----GACG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41080 8 -     64179 AAGT----GACG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22727 8 -     24835 AAGT----GACG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39710 8 +     45454 AAGT----GACG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45408 8 +     70886 AAGT----GACA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7533 8 +     30854 AAGT----GACG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31672 8 +     42133 AAGT----GACG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583952 2 +   2318259 ---t----G---
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175396 2 -    412891 ---t----g---
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49051 2 -     68529 ---T----G---
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   49460 8 -     65372 AAGT----GATG
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43214 8 +     43593 AAGT----GATG
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671227 8 +   5030052 AAGT----GATG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22869 8 -     23494 AAGT----GATG
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                8005 8 +      8415 AAGT----GATG
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14749 5 -     32367 AAGT----G---
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3689 2 -     15198 ---T----G---
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 4 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273472 8 +  21539123 AAGT----GACG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9638 8 +     48076 AAGT----GACG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4775 8 -     28759 AAGT----GACG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32329 8 +     44353 AAGT----GACG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47699 8 -     71267 AAGT----GACG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21759 8 -     33135 AAGT----GACG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955781 2 -  23207421 ---T----G---
i Balaenoptera_acutorostrata.KI537508.1                  I 4 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2989 2 -      4711 ---T----G---
i Balaenoptera_bonaerensis.DF507193.1                    I 4 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84947 2 +    124022 ---T----G---
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20480 2 +    288883 ---T----G---
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354867 2 +  48749331 ---T----G---
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753435 2 +   1948126 ---T----G---
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543574 2 -  45695690 ---T----G---
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528598 2 -   4408762 ---T----G---
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6664 8 +     28062 AAGT----GACA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41958 8 -     91139 AAGT----GACA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19484 8 +     95584 AAGT----GACA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19397 8 +    119600 AAGT----GACA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8943 8 +     18648 AAGT----GACG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8481 8 -     13885 AAGT----GACA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             549 8 -      8861 AAGT----GATG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452942 8 + 189096842 AAGT----GATG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                465 8 +      8664 AAGT----GATA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629767 6 +  17673402 ---TAAGTG---
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664053 6 +   7040546 ---TAAGTG---
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207713 6 +   1652518 ---TAAGTG---
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504126 1 +  60362399 ---T--------
i CanFam4.chr16                                          C 0 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7762 1 -     23171 ---T--------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 4
s Canis_lupus_dingo.QKWQ01000480.1                          221105 1 +   9314153 ---T--------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 4
s Canis_lupus_familiaris.chr16                            41614240 1 +  59632846 ---T--------
i Canis_lupus_familiaris.chr16                           C 0 I 4
s Canis_lupus_orion.HG994398.1                            45105821 1 -  63665305 ---T--------
i Canis_lupus_orion.HG994398.1                           C 0 I 4
s Capra_aegagrus.CM003241.1                               27407663 2 -  46296322 ---T----G---
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589936 2 +  44709034 ---T----G---
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269029 8 +    496798 aagt----gacc
i Carlito_syrichta.NW_007259797.1                        C 0 I 3
s Carollia_perspicillata.CarPer_scaffold_170178               3978 2 +      5315 ---T----G---
i Carollia_perspicillata.CarPer_scaffold_170178          I 4 C 0
s Castor_canadensis.CasCan_scaffold_39952                    20468 4 -     39886 T-AA----T---
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75437 2 -    217609 ---T----G---
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994695 4 +  23392119 C-AT----t---
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998137 4 +  23407841 c-at----t---
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61238 4 -     66877 C-AT----T---
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3862 8 -     12580 AAGT----GATG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41917 8 +     53515 AAGT----GATG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369855 8 -  26074798 AAGT----GACG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6744 8 -     34880 AAGT----GACG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65839 8 -     89041 AAGT----GACG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          952 8 -      5494 AAGT----GACC
i Cephalopachus_bancanus.k141_1689090                    C 0 I 3
s Ceratotherium_simum.JH767749.1                          15490914 2 -  27778364 ---T----G---
i Ceratotherium_simum.JH767749.1                         I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17747 2 +     27315 ---T----G---
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 4 C 0
s Cercocebus_atys.KQ010504.1                                139432 5 -   4669795 aagt----a---
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43172 5 +     47900 AAGT----A---
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43005 5 -     44860 AAGT----A---
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42988 5 -    148725 AAGT----A---
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10245 8 -     17524 AAGT----AACA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25967 8 -     34525 AAGT----AACA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30443 8 -     45857 AAGT----AACA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23936 8 +     70610 AAGT----AACA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20861 8 +     36323 AAGT----AACA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11551 4 -     19938 AAG-----T---
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7745 8 -     32913 GAGT----GACG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18158 8 -     40346 GAGT----GACG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18413 8 +    216457 GAGT----GACG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18206 8 +     39636 GAGT----GACG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2791 8 +      5346 AAGT----GACG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41292 8 -    112038 AAGT----GACA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6864 8 +     34062 AAGT----GACA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341758 8 +  18827391 AAGT----AACA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8303 8 -     44032 AAGT----AACA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303083 8 - 135778131 AAgt----aaca
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10602 5 +     15858 AAGT----T---
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            602178 5 -    839153 AAGT----T---
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407524 8 -   2368649 AAGT----Aacc
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377402 8 - 200372422 AAGT----AACC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                949 8 -     84244 AAGT----AACC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805981 2 +  53390261 ---T----G---
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1552 2 -      8242 ---T----G---
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40970 4 -     83289 C-GT----T---
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3030 6 +     87169 ---CAAGTG---
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643505 4 -   1526836 T-GC----T---
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3705 4 +     50838 T-GT----T---
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 1 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2616 4 +     36344 T-GT----T---
i Cuniculus_paca.CunPac_flattened_line_7025              I 1 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26378 4 +     75252 C-AT----C---
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 1 C 0
s Dasypus_novemcinctus.JH564415.1                          2108892 5 -   2246927 AAGT----T---
i Dasypus_novemcinctus.JH564415.1                        I 16 C 0
s Delphinapterus_leucas.KZ290073.1                        18624109 2 -  35494412 ---t----g---
i Delphinapterus_leucas.KZ290073.1                       I 4 C 0
s Desmodus_rotundus.KZ672289.1                            11863427 2 -  20541912 ---T----G---
i Desmodus_rotundus.KZ672289.1                           I 4 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663205 2 -   1390856 ---T----G---
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 4 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137991 2 -    198055 ---T----G---
i Diceros_bicornis.DicBicMic_scaffold_5955               I 4 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97193 4 -    115145 C-AT----T---
i Dinomys_branickii.DinBra_scaffold_10381                I 1 C 0
s Dipodomys_ordii.KN672350.1                              18949067 2 -  37912305 A-G---------
i Dipodomys_ordii.KN672350.1                             C 0 I 4
s Dipodomys_stephensi.DipSte_scaffold_89095                   4014 2 -     10735 A-G---------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 4
s Dolichotis_patagonum.DolPat_scaffold_80628                  8652 4 +     14636 C-AT----T---
i Dolichotis_patagonum.DolPat_scaffold_80628             I 1 C 0
s Echinops_telfairi.JH980293.1                            62853047 5 - 111700974 AAAT----G---
i Echinops_telfairi.JH980293.1                           I 3 C 0
s Eidolon_helvum.AWHC01266696.1                               5015 2 +     19438 ---T----G---
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238338 2 -    607251 ---t----G---
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107073 5 -  10337057 AGGT----G---
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914856 6 +  41312741 ---TAAATG---
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577056 2 +  14770903 ---T----G---
i Eptesicus_fuscus.JH977646.1                            I 2 C 0
s Erythrocebus_patas.Contig38                               261281 8 +  21539334 AAGT----AACA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63660 2 -    133382 ---t----g---
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 4 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3876 2 +      7672 ---T----G---
i Eubalaena_japonica.EubJap_flattened_line_118172        I 4 C 0
s Felis_catus.CM001381.2                                 186245490 6 - 206538554 ---TAAGTG---
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115275 6 - 205367284 ---TAAGTG---
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26377 6 -     30238 ---TAAGTG---
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17801 5 +     18121 AATT----G---
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90017 2 -     95226 ---t----G---
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32926 5 -     36801 AAGT----G---
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4266 6 -      8343 AAGT----AA--
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253277 8 - 186649187 AAgt----aaca
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     424 5 -     78134 AAGA----G---
i Graphiurus_murinus.GraMur_scaffold_10447               I 16 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29516 6 -    327341 ---CAAGTG---
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7770 2 +     48891 ---T----G---
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925788 4 -  22651954 a-gt----t---
i Heterocephalus_glaber.JH602082.1                       I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6373 2 -     36432 ---T----G---
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 4 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49537 2 +     49977 ---T----G---
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141266 8 -    630532 AAGT----AACA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68206 6 +     83186 ---TAAGTG---
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70078 4 +    143317 T-AT----T---
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 1 C 0
s Hylobates_agilis.k141_1155965                               4300 8 +     12352 AAGT----AACA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11483 8 +     55766 AAGT----AACA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051079 8 + 191637585 AAGT----AACA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799957 8 +  11177569 AAGT----AACA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385496 5 +   7955117 AAGT----G---
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1896 2 -     16823 ---T----G---
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 4 C 0
s Jaculus_jaculus.JH725527.1                               1237892 4 +   9596543 C-AA----T---
i Jaculus_jaculus.JH725527.1                             I 1 I 2
s Kogia_breviceps.KogBre_flattened_line_3970                 64385 2 -     97402 ---T----G---
i Kogia_breviceps.KogBre_flattened_line_3970             I 4 C 0
s Lagothrix_lagothricha.k141_246028                          42014 8 +    110728 aaGT----GATG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60522 2 -     65777 ---t----g---
i Lasiurus_borealis.LasBor_scaffold_16567                I 2 C 0
s Leontocebus_fuscicollis.k141_2994775                        2927 8 -     13097 AAGT----GACA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2682 8 +      5940 AAGT----GACG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2512 8 -      5717 AAGT----GACG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8879 8 -     11567 AAGT----GACG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10260 8 -     12945 AAGT----GACG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812251 6 -   3914936 ---TAAGTG---
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16589 5 +     24238 AACT----G---
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333419 2 +    662738 ---T----G---
i Lipotes_vexillifer.KE559953.1                          I 4 C 0
s Lophocebus_aterrimus.ctg367                               331385 8 -   1826925 AAGT----AACA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39079750 5 +  43346337 aaat----g---
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613395 1 +  59628241 ---T--------
i Lycaon_pictus.CM007581.1                               C 0 I 4
s Macaca_arctoides.k141_1757516                              43702 8 -     61512 AAGT----AACA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371363 8 -  60120075 AAGT----AACA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23618 8 +     30207 AAGT----AACA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20721 8 -     24934 AAGT----AACA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23570 8 +     30527 AAGT----AACA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34759 8 -     50087 AAGT----AACA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44530 8 +     51645 AAGT----AACA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413699 8 - 187317192 AAgt----aaca
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397922 8 +  25927173 AAgt----aaca
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47086 8 -     62418 AAGT----AACA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23741 8 +     24253 AAGT----AACA
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43561 8 +     59329 AAGT----AACA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269489 8 +    668171 AAGT----AACA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20676 8 +     21031 AAGT----AACA
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 1273 8 +     17132 AAGT----AACA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221978 2 -    270270 ---T----A---
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        320773 8 +  24302211 AAGT----AACA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355605 8 -    752769 AAGT----AACA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672290 6 -    737560 ---taaatg---
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219577 6 +    317179 ---taaatg---
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499720 5 +  40650429 AAGT----g---
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149134 2 +    207569 ---T----G---
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24744 6 -     74585 ---TAAATG---
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47867 4 -    140813 A-AT----T---
i Meriones_unguiculatus.MerUng_scaffold_7390             I 550 I 2
s Mesoplodon_bidens.MesBid_scaffold_6114                     79963 2 +     93471 ---t----g---
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 4 C 0
s Mico_argentatus.k141_582562                                 9053 8 +     17804 AAGT----GACG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9555 8 -     12984 AAGT----GACG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17869 8 -     26561 AAGT----GACG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44142 5 +    145209 AAAT----G---
i Microgale_talazaci.MicTal_scaffold_6613                I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183368 2 +    200668 ---T----G---
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 4 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361466 2 -   8254450 ---T----g---
i Miniopterus_natalensis.LDJU01000034.1                  I 4 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40367 2 -     48117 ---T----G---
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 4 C 0
s Miopithecus_ogouensis.k141_1534655                         20784 8 -     27822 AAGT----AACA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7258 6 +     27589 ---TAAGTG---
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351852 2 +    437263 ---t----g---
i Monodon_monoceros.MonMon_M_scaffold_103                I 4 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177528 2 +    366855 ---T----G---
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  22922 2 -     82753 ---T----G---
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 144
s Mungos_mungo.MunMun_flattened_line_18455                   17269 6 -     63510 ---CAAGTG---
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 2
s Murina_feae.MurFea_scaffold_17764                          37403 2 +     47283 ---T----G---
i Murina_feae.MurFea_scaffold_17764                      I 2 C 0
s Mus_caroli.LT608237.1                                   35591734 4 + 120012414 a-at----t---
i Mus_caroli.LT608237.1                                  C 0 I 2
s Mus_musculus.chr8                                       41686093 4 + 129401213 a-at----t---
i Mus_musculus.chr8                                      C 0 I 2
s Mus_pahari.LT608297.1                                   58215980 4 +  89631738 a-at----t---
i Mus_pahari.LT608297.1                                  C 0 I 2
s Mus_spretus.CM004101.1                                  39495413 4 + 130317789 a-at----t---
i Mus_spretus.CM004101.1                                 C 0 I 2
s Muscardinus_avellanarius.MusAve_scaffold_12866             81512 5 -     86153 AAGT----G---
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353891 6 +  14710649 ---TAAATG---
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791453 2 +  10118263 ---T----G---
i Myotis_brandtii.KE162005.1                             I 2 C 0
s Myotis_davidii.KB100139.1                                4385813 2 +   6019432 ---T----G---
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                               381635 2 +   4330536 ---T----G---
i Myotis_lucifugus.GL429869.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          462 2 +     18357 ---T----G---
i Myotis_myotis.MyoMyo_scaffold_66571                    I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118335 5 +    130748 AAGG----T---
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             944798 4 +   3037898 A-AT----T---
i Nannospalax_galili.KL204047.1                          C 0 I 2
s Nasalis_larvatus.k141_1350636                              27452 8 +     34575 AAGC----AACC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467854 6 -  31847680 ---TAAGTG---
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226021 2 -   7148211 ---t----g---
i Neophocaena_asiaeorientalis.KZ687982.1                 I 4 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126313 2 -    149072 ---T----G---
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52189 8 -    132029 AAGT----AATA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8284 8 -     16345 AAGT----AATA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14169 8 +     22201 AAGT----AATA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412390 8 -  22158432 AAGT----AATA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24567 8 -     54323 AAGT----AATA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196992 1 +   9404916 ---T--------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 4
s Ochotona_princeps.JH802162.1                             2549949 5 -   3988456 Aagc----a---
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11046226 4 -  11899542 t-gt----t---
i Octodon_degus.JH651603.1                               I 1 C 0
s Odobenus_rosmarus.KB229312.1                             1450451 6 +   2017862 ---TAAGTG---
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434909 2 -    630418 ---t----G---
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12901 2 +    150152 ---t----g---
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8095291 2 +  10937097 ---t----g---
i Orcinus_orca.KB316932.1                                I 4 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12382 5 -     14239 AAAT----G---
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102421 5 - 174332312 aact----g---
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38034 1 +    559221 ---T--------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 4
s Ovis_aries.CM001607.2                                   26402890 2 -  44047080 ---t----G---
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3409 2 +     17875 ---T----G---
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471282 8 - 189151597 AAgt----aaca
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23198 6 -    230217 ---TAAGTG---
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460524 6 -  18783137 ---TAAGTG---
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971244 6 +   8748460 ---TAAGTG---
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614333 2 +   2937107 ---t----G---
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   241613 8 - 183742232 AAGT----aaca
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8077 8 +     21308 AAGT----AACA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  290654 8 -  20919399 AAGT----AACA
i Papio_hamadryas.Contig39                               I 1538 C 0
s Papio_kindae.k141_2214839                                  20732 8 -     27687 AAGT----AACA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13868 8 +     16796 AAGT----AACA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20678 8 -     23640 AAGT----AACA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13837 6 +     78924 ---TAAGCG---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         419 2 +      9367 A-G---------
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 4
s Petromus_typicus.PetTyp_scaffold_17301                     30661 4 -     56120 A-GC----T---
i Petromus_typicus.PetTyp_scaffold_17301                 I 1 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11149 2 -     15039 ---T----G---
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 4 C 0
s Piliocolobus_badius.k141_2704958                             896 8 +     55023 AAGT----AACC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          447 8 -     89929 AAGT----AACC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1035 8 +     40849 AAGT----AACC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252702 8 +  14605196 AAGT----Aacc
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1581 2 +     22231 ---T----G---
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 2 C 0
s Pithecia_albicans.k141_1239476                             63651 8 +    207309 AAGT----GACG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4745 8 -     25401 AAGT----GACG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30486 8 +     58159 AAGT----GACG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30762 8 +     63561 AAGT----GACG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30525 8 +     51148 AAGT----GACG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555492 8 -   4542175 AAGT----GACG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30509 8 +     51125 AAGT----GACG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3233 2 -      8168 ---T----G---
i Platanista_gangetica.PlaMin_flattened_line_167872      I 4 C 0
s Plecturocebus_bernhardi.k141_2549090                        6913 8 +     39866 GAGT----GACG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          1998 8 -      9282 GAGT----GACG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41402 8 -     87950 GAGT----GACG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41795 8 -     88961 GAGT----GACG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6494 8 -     39403 GAGT----GACG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41446 8 +     87928 GAGT----GACG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6491 8 -     60166 GAGT----GACG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13427 8 -     67232 GAGT----GACG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41343 8 -     90634 GAGT----GACG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42811 8 +     89403 GAGT----GACG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176408 8 - 189387572 AAgt----aaca
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191226 8 -   9816681 AAGT----AACA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26032 8 +     69807 AAGT----AACC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43227 8 -     80239 AAGT----AACC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Psammomys_obesus.NESX01036366.1                            35440 4 +     52041 a-at----t---
i Psammomys_obesus.NESX01036366.1                        I 579 I 2
s Pteronotus_parnellii.KE847780.1                            50410 2 -     66298 ---C----A---
i Pteronotus_parnellii.KE847780.1                        I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3458 6 -     18639 ---TAAATG---
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839665 2 -  28871421 ---T----G---
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536174 2 -   4952924 ---T----G---
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097838 6 +  38429054 ---TAAGTG---
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25407 8 +     91421 AAGT----AACC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151900 8 -   7812017 AAGT----AACC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6277 8 +     72585 AAGT----AACC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51830 2 +     55069 ---T----G---
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021338 4 -  90668790 a-at----t---
i Rattus_norvegicus.chr16                                C 0 I 2
s Rhinolophus_sinicus.LVEH01000134.1                       2913553 2 +   3329780 ---T----G---
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_221883                            27217 8 +     27361 AAGT----AACC
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120584 8 + 195417433 AAGT----Aacc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234825 8 -   7961872 AAGT----AACC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73587 2 -    116970 ---T----C---
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2789 8 +     27962 AAGT----GACG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2684 8 +      6077 AAGT----GACG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2775 8 +      5971 AAGT----GACG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2717 8 +      5932 AAGT----GACG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1040 8 -      4390 AAGT----GACG
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390473 8 - 209938924 AAGT----GACG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2665 8 +      5979 AAGT----GACG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3407 8 -      4301 AAGT----GACG
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6483 2 +     16473 ---T----G---
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107812 7 + 121099817 AAGT----GAT-
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29374 7 -     47369 AAGT----GAT-
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29763 7 -     79414 ACGT----GAT-
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26455 7 -     34454 ACGT----GAT-
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13861 7 -     22428 ACGT----GAT-
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29006 7 -     47109 AAGT----GAT-
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237074 8 +   5703754 AAGT----GACA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6664 8 +     21866 AAGT----GACA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114771 2 +    313613 ---T----G---
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         23724 8 +     27374 AAGT----AACC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27243 8 +     58920 AAGT----AACC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13739 8 -     45317 AAGT----AACC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21397 8 -     42441 AAGT----AACC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24077 8 -     29113 AAGT----AACC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27146 8 -     48123 AAGT----AACC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857088 2 -   1910179 ---T----G---
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867078 5 +   3870691 AAGT----G---
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5226 6 -     97271 ---TAAGTG---
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123676 6 +    196729 ---CAAGTG---
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                    6639899 2 +  69701581 ---t----G---
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389649 8 +   1523678 AAGT----AACA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12391 2 +     22964 ---T----G---
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 4 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1451 5 +      5583 AAGG----T---
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190367 2 +    199430 ---T----G---
i Tapirus_indicus.TapInd_scaffold_7432                   I 4 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104318 2 -    539355 ---T----G---
i Tapirus_terrestris.TapTer_scaffold_755                 I 4 C 0
s Tarsius_lariang.k141_1780720                                5661 8 +      6850 AAGT----GACC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5709 8 +     20590 AAGT----GACA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351599 8 - 186847797 AAgt----aaca
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23021 4 -     33621 A-GC----T---
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 1 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18586 4 -     31044 AAG-----T---
i Tolypeutes_matacus.TolMat_scaffold_31955               I 17 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478434 2 -    610378 ---T----G---
i Tonatia_saurophila.TonSau_scaffold_294                 I 4 C 0
s Trachypithecus_auratus.k141_1189070                        19288 8 +     26378 AAGT----AACC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31952 8 -     78344 AAGT----AACC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18609 8 +     25722 AAGT----AACC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26903 8 -     62838 AAGT----AACC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26951 8 +     46913 AAGT----AACC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7757 8 -     28527 AAGT----AACC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28842 8 -     64340 AAGT----AACC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26879 8 -     63452 AAGT----AACC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8322 8 +     22490 AAGT----AACC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1750 8 -      6147 AAGT----AACC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8655 8 -     13050 AAGT----AACC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253894 8 -   6242583 AAGT----AACC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59645 8 +     59866 AAGT----AACC
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172100 2 -    200418 ---T----G---
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479198 5 -  10818551 aaat----g---
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832616 5 -   4065304 AAGT----G---
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6932 5 -     70247 AAGT----G---
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360030 2 -  33153633 ---t----g---
i Tursiops_truncatus.MRVK01000835.1                      I 4 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     970 2 -     21056 ---T----G---
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180610 6 +   5085361 ---TAAGTG---
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   75105 6 +   5488506 ---TAAGTG---
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103756 1 -    112863 ---T--------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 4
s Xerus_inauris.XerIna_scaffold_2302                        172856 5 -    224448 AAAT----G---
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27649 6 -     86975 ---TAAGTG---
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2139 4 +      2695 C-AC----T---
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 50 I 2
e Perodicticus_potto.k141_1854441                            17064 0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          24700 0 +     31479 C
e Otolemur_garnettii.GL873799.1                             351417 0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        38414 0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563256 0 - 199412804 C
e Nycticebus_coucang.k141_3846325                             1775 0 -      3937 C
e Nycticebus_bengalensis.LG01                             93635017 0 + 196305487 C
e Loris_tardigradus.ctg83                                  5042680 0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            9019 0 +     19643 C
e Galagoides_demidoff.k141_561628                            18857 0 -     32986 C
e Galago_senegalensis.k141_991736                             6806 0 +     22493 C
e Galago_moholi.ctg3793                                     123261 0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Varecia_variegata.k141_289850                              22904 14 -    147434 I
e Varecia_rubra.k141_787544                                  23997 14 -     30710 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    47779 3 +     77746 I
e Propithecus_verreauxi.k141_1047036                          7021 14 +     35169 I
e Propithecus_tattersalli.k141_1127767                       93384 14 -     98465 I
e Propithecus_perrieri.k141_1496898                          33113 14 +     46564 I
e Propithecus_edwardsi.k141_635656                            6788 14 -     30655 I
e Propithecus_diadema.k141_153680                             3052 14 -     11706 I
e Propithecus_coronatus.k141_209299                           2455 14 -      7103 I
e Propithecus_coquerelli.NW_012148875.1                    1564819 14 -   2598838 I
e Prolemur_simus.MPIZ01000396.1                            1981353 14 +   4620579 I
e Peromyscus_maniculatus.KI615324.1                         245563 3 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    2338 3 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    91479 3 -    140218 I
e Mirza_zaza.k141_766280                                     51128 14 -     62432 I
e Microtus_ochrogaster.CM001695.1                         15961120 3 +  27267610 I
e Microcebus_murinus.CM007674.1                           74983339 14 +  93316391 I
e Mesocricetus_auratus.KB708134.1                         17427984 3 +  29670104 I
e Lepilemur_septentrionalis.k141_360456                       7733 14 +     16388 I
e Lepilemur_ruficaudatus.k141_330196                          7735 14 +     24756 I
e Lepilemur_dorsalis.k141_387009                              7723 14 +     31569 I
e Lepilemur_ankaranensis.k141_567626                          7727 14 +     29618 I
e Lemur_catta.scaffold_24                                 14758198 14 +  30322482 I
e Indri_indri.k141_2415743                                    1058 14 +     11955 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hapalemur_occidentalis.k141_578367                         15549 14 -     53142 I
e Hapalemur_meridionalis.k141_258450                          8549 14 -     42923 I
e Hapalemur_griseus.k141_763500                              59676 14 -     66874 I
e Hapalemur_gilberti.k141_646465                             34807 14 +     49394 I
e Hapalemur_alaotrensis.k141_330369                          13406 14 -     40692 I
e Eulemur_sanfordi.k141_1122526                              57722 14 -    111500 I
e Eulemur_rufus.k141_514691                                  41318 14 -     52037 I
e Eulemur_rubriventer.k141_1423786                            3597 14 +     30972 I
e Eulemur_mongoz.k141_232305                                 46871 14 -     97555 I
e Eulemur_macaco.k141_1562045                                22678 14 -     75513 I
e Eulemur_fulvus.k141_636316                                 52045 14 -     65740 I
e Eulemur_flavifrons.k141_433119                             41723 14 +     68309 I
e Eulemur_coronatus.k141_384460                              85150 14 +    112731 I
e Eulemur_collaris.k141_601111                               41188 14 -     70999 I
e Eulemur_albifrons.k141_51491                               13479 14 -     24895 I
e Equus_przewalskii.KK951119.1                              410751 0 -    498745 C
e Equus_caballus.CM000403.2                               21373965 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041 0 -   4378816 C
e Ellobius_talpinus.LOJH01026522.1                           11683 3 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          29708 3 +    110024 I
e Daubentonia_madagascariensis.ctg71                        291307 14 +  12879189 I
e Cricetulus_griseus.LT883664.1                          213113434 3 - 224834208 I
e Cheirogaleus_medius.k141_759766                             3866 18 -     15404 I
e Cheirogaleus_major.k141_666340                             29349 18 -     33796 I
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Avahi_peyrierasi.k141_1823318                               4941 14 -     19611 I
e Avahi_laniger.k141_2756659                                  4935 14 +     11645 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3935 3 +     36723 cac
s Acinonyx_jubatus.LLWD01001279.1                           811583 2 +   1699592 -AC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 4
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414110 2 +  29979442 -AC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 4
s Ailurus_fulgens.LNAC01001112.1                            214208 2 +    347723 -AC
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 4
s Allenopithecus_nigroviridis.k141_3755588                   46261 3 +     53615 CAC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42205 3 +     44087 CAC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         14843 3 -     21945 CAC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16515 3 +     32033 CAC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70968 3 -     84148 CAG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43201 3 -     78289 CAG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42647 3 +     55831 CAG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41088 3 -     64179 CAG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22735 3 -     24835 CAG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39718 3 +     45454 CAG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45416 3 +     70886 CAG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7541 3 +     30854 CAG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31680 3 +     42133 CAG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583954 2 +   2318259 -AC
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_1412                      175398 2 -    412891 -tt
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 4
s Antilocapra_americana.AntAmePen_scaffold_21030             49053 2 -     68529 -AC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 4
s Aotus_azarae.k141_118258                                   49468 3 -     65372 CGC
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43222 3 +     43593 CGC
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671235 3 +   5030052 CGC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22877 3 -     23494 CGC
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                8013 3 +      8415 CGC
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14754 2 -     32367 -AC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 4
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3691 2 -     15198 -TC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 4
s Ateles_geoffroyi_b.tarseq_1536                               273480 3 +  21539123 CAG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9646 3 +     48076 CAG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4783 3 -     28759 CAG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32337 3 +     44353 CAG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47707 3 -     71267 CAG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21767 3 -     33135 CAG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4949 2 +     11645 -AT
i Avahi_laniger.k141_2756659                             I 14 C 0
s Avahi_peyrierasi.k141_1823318                               4955 2 -     19611 -AT
i Avahi_peyrierasi.k141_1823318                          I 14 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955783 2 -  23207421 -TC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 3
s Balaenoptera_bonaerensis.DF507193.1                         2991 2 -      4711 -TC
i Balaenoptera_bonaerensis.DF507193.1                    C 0 I 4
s Beatragus_hunteri.BeaHun_scaffold_7278                     84949 2 +    124022 -AC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 4
s Bison_bison.KN261452.1                                     20482 2 +    288883 -AC
i Bison_bison.KN261452.1                                 C 0 I 4
s Bos_indicus.CM003047.1                                  20354869 2 +  48749331 -AC
i Bos_indicus.CM003047.1                                 C 0 I 4
s Bos_mutus.JH880303.1                                      753437 2 +   1948126 -AC
i Bos_mutus.JH880303.1                                   C 0 I 4
s Bos_taurus.CM000203.6                                   27543576 2 -  45695690 -AC
i Bos_taurus.CM000203.6                                  C 0 I 4
s Bubalus_bubalis.KI419123.1                               1528600 2 -   4408762 -AC
i Bubalus_bubalis.KI419123.1                             C 0 I 4
s Cacajao_ayresi.k141_96119                                   6672 3 +     28062 CAC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41966 3 -     91139 CAC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19492 3 +     95584 CAC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19405 3 +    119600 CAC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8951 3 +     18648 CGC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8489 3 -     13885 CAC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             557 3 -      8861 CCC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452950 3 + 189096842 CCC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                473 3 +      8664 CCC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629773 2 +  17673402 -GC
i Camelus_bactrianus.KN276810.1                          C 0 I 4
s Camelus_dromedarius.KN272107.1                           4664059 2 +   7040546 -GC
i Camelus_dromedarius.KN272107.1                         C 0 I 4
s Camelus_ferus.KB017975.1                                 1207719 2 +   1652518 -GC
i Camelus_ferus.KB017975.1                               C 0 I 4
s Capra_aegagrus.CM003241.1                               27407665 2 -  46296322 -AC
i Capra_aegagrus.CM003241.1                              C 0 I 4
s Capra_hircus.CM004588.1                                 26589938 2 +  44709034 -AC
i Capra_hircus.CM004588.1                                C 0 I 4
s Carlito_syrichta.NW_007259797.1                           269040 3 +    496798 aaa
i Carlito_syrichta.NW_007259797.1                        I 3 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3980 2 +      5315 -TC
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 4
s Castor_canadensis.CasCan_scaffold_39952                    20472 2 -     39886 -AT
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 6252
s Catagonus_wagneri.CatWag_scaffold_2839                     75439 2 -    217609 -AC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 4
s Cavia_aperea.AVPZ01000300.1                              4994699 2 +  23392119 -ac
i Cavia_aperea.AVPZ01000300.1                            C 0 I 4
s Cavia_porcellus.DS562891.1                               4998141 2 +  23407841 -ac
i Cavia_porcellus.DS562891.1                             C 0 I 4
s Cavia_tschudii.CavTsc_scaffold_23560                       61242 2 -     66877 -AC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 4
s Cebuella_niveiventris.k141_592277                           3870 3 -     12580 CGC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41925 3 +     53515 CGC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369863 3 -  26074798 CAC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6752 3 -     34880 CAC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65847 3 -     89041 CAC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          963 3 -      5494 AAA
i Cephalopachus_bancanus.k141_1689090                    I 3 C 0
s Ceratotherium_simum.JH767749.1                          15490916 2 -  27778364 -AC
i Ceratotherium_simum.JH767749.1                         C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17749 2 +     27315 -AC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 4
s Cercocebus_atys.KQ010504.1                                139437 2 -   4669795 -ac
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43177 2 +     47900 -AC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43010 2 -     44860 -AC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          42993 2 -    148725 -AC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10253 3 -     17524 CAC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          25975 3 -     34525 CAC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30451 3 -     45857 CAC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23944 3 +     70610 CAC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20869 3 +     36323 CAC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11555 2 -     19938 -AC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 4
s Cheirogaleus_major.k141_666340                             29367 2 -     33796 -AT
i Cheirogaleus_major.k141_666340                         I 18 C 0
s Cheirogaleus_medius.k141_759766                             3884 2 -     15404 -AT
i Cheirogaleus_medius.k141_759766                        I 18 C 0
s Cheracebus_lucifer.k141_2312002                             7753 3 -     32913 CAC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18166 3 -     40346 CAC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18421 3 +    216457 CAC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18214 3 +     39636 CAC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2799 3 +      5346 CAC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41300 3 -    112038 CAC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6872 3 +     34062 CAC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341766 3 +  18827391 CAC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8311 3 -     44032 CAC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303091 3 - 135778131 cac
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10607 2 +     15858 -AC
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 4
s Choloepus_hoffmanni.KN194906.1                            602183 2 -    839153 -AC
i Choloepus_hoffmanni.KN194906.1                         C 0 I 4
s Colobus_angolensis.KN981557.1                             407532 3 -   2368649 cac
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377410 3 - 200372422 CAC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                957 3 -     84244 CAC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805983 2 +  53390261 -at
i Condylura_cristata.JH655891.1                          C 0 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1554 2 -      8242 -AT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3036 2 +     87169 -GC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 4
s Ctenodactylus_gundi.CteGun_scaffold_65                    643509 2 -   1526836 -TT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 4
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3709 2 +     50838 -AC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 4
s Cuniculus_paca.CunPac_flattened_line_7025                   2620 2 +     36344 -AC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 4
s Dasyprocta_punctata.DasPun_flattened_line_15900            26382 2 +     75252 -GC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 4
s Dasypus_novemcinctus.JH564415.1                          2108897 2 -   2246927 -AC
i Dasypus_novemcinctus.JH564415.1                        C 0 I 4
s Daubentonia_madagascariensis.ctg71                        291321 2 +  12879189 -AT
i Daubentonia_madagascariensis.ctg71                     I 14 C 0
s Delphinapterus_leucas.KZ290073.1                        18624111 2 -  35494412 -tc
i Delphinapterus_leucas.KZ290073.1                       C 0 I 4
s Desmodus_rotundus.KZ672289.1                            11863429 2 -  20541912 -TG
i Desmodus_rotundus.KZ672289.1                           C 0 I 4
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663207 2 -   1390856 -AT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 4
s Diceros_bicornis.DicBicMic_scaffold_5955                  137993 2 -    198055 -AC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 4
s Dinomys_branickii.DinBra_scaffold_10381                    97197 2 -    115145 -AC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 4
s Dolichotis_patagonum.DolPat_scaffold_80628                  8656 2 +     14636 -AC
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 4
s Echinops_telfairi.JH980293.1                            62853052 2 - 111700974 -AC
i Echinops_telfairi.JH980293.1                           C 0 I 3
s Eidolon_helvum.AWHC01266696.1                               5017 2 +     19438 -AC
i Eidolon_helvum.AWHC01266696.1                          C 0 I 4
s Elaphurus_davidianus.JRFZ01104969.1                       238340 2 -    607251 -AC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 4
s Elephantulus_edwardii.JH947257.1                         9107078 2 -  10337057 -AT
i Elephantulus_edwardii.JH947257.1                       C 0 I 5
s Enhydra_lutris.KZ291758.1                               24914862 2 +  41312741 -AT
i Enhydra_lutris.KZ291758.1                              C 0 I 4
s Eptesicus_fuscus.JH977646.1                             12577058 2 +  14770903 -AC
i Eptesicus_fuscus.JH977646.1                            C 0 I 5
s Erythrocebus_patas.Contig38                               261289 3 +  21539334 CAC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63662 2 -    133382 -tc
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_118172             3878 2 +      7672 -TC
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 I 4
s Eulemur_albifrons.k141_51491                               13493 2 -     24895 -AT
i Eulemur_albifrons.k141_51491                           I 14 C 0
s Eulemur_collaris.k141_601111                               41202 2 -     70999 -AT
i Eulemur_collaris.k141_601111                           I 14 C 0
s Eulemur_coronatus.k141_384460                              85164 2 +    112731 -AT
i Eulemur_coronatus.k141_384460                          I 14 C 0
s Eulemur_flavifrons.k141_433119                             41737 2 +     68309 -AT
i Eulemur_flavifrons.k141_433119                         I 14 C 0
s Eulemur_fulvus.k141_636316                                 52059 2 -     65740 -AT
i Eulemur_fulvus.k141_636316                             I 14 C 0
s Eulemur_macaco.k141_1562045                                22692 2 -     75513 -AT
i Eulemur_macaco.k141_1562045                            I 14 C 0
s Eulemur_mongoz.k141_232305                                 46885 2 -     97555 -AT
i Eulemur_mongoz.k141_232305                             I 14 C 0
s Eulemur_rubriventer.k141_1423786                            3611 2 +     30972 -AT
i Eulemur_rubriventer.k141_1423786                       I 14 C 0
s Eulemur_rufus.k141_514691                                  41332 2 -     52037 -AT
i Eulemur_rufus.k141_514691                              I 14 C 0
s Eulemur_sanfordi.k141_1122526                              57736 2 -    111500 -AT
i Eulemur_sanfordi.k141_1122526                          I 14 C 0
s Felis_catus.CM001381.2                                 186245496 2 - 206538554 -AC
i Felis_catus.CM001381.2                                 C 0 I 4
s Felis_catus_fca126.CM031415.1                          185115281 2 - 205367284 -AC
i Felis_catus_fca126.CM031415.1                          C 0 I 4
s Felis_nigripes.FelNig_flattened_line_31944                 26383 2 -     30238 -AC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 4
s Galago_moholi.ctg3793                                     123261 2 -    137831 -AT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6806 2 +     22493 -AT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18857 2 -     32986 -AT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17806 2 +     18121 -AC
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 4
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90019 2 -     95226 -AC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 4
s Glis_glis.GliGli_scaffold_33859                            32931 2 -     36801 -AC
i Glis_glis.GliGli_scaffold_33859                        C 0 I 4
s Gorilla_beringei.k141_3358147                               4272 1 -      8343 --C
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253285 3 - 186649187 cac
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     429 2 -     78134 -AC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 4
s Hapalemur_alaotrensis.k141_330369                          13420 2 -     40692 -AT
i Hapalemur_alaotrensis.k141_330369                      I 14 C 0
s Hapalemur_gilberti.k141_646465                             34821 2 +     49394 -AT
i Hapalemur_gilberti.k141_646465                         I 14 C 0
s Hapalemur_griseus.k141_763500                              59690 2 -     66874 -AT
i Hapalemur_griseus.k141_763500                          I 14 C 0
s Hapalemur_meridionalis.k141_258450                          8563 2 -     42923 -AT
i Hapalemur_meridionalis.k141_258450                     I 14 C 0
s Hapalemur_occidentalis.k141_578367                         15563 2 -     53142 -AT
i Hapalemur_occidentalis.k141_578367                     I 14 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7772 2 +     48891 -AC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 4
s Heterocephalus_glaber.JH602082.1                         1925792 2 -  22651954 -at
i Heterocephalus_glaber.JH602082.1                       C 0 I 4
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6375 2 -     36432 -AC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 4
s Hipposideros_galeritus.HipGal_scaffold_23202               49539 2 +     49977 -AC
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 3
s Hoolock_leuconedys.ctg274                                    141274 3 -    630532 CAC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68212 2 +     83186 -AC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 4
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70082 2 +    143317 -AC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 4
s Hylobates_agilis.k141_1155965                               4308 3 +     12352 CAC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11491 3 +     55766 CAC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051087 3 + 191637585 CAC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799965 3 +  11177569 CAC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385501 2 +   7955117 -ac
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 4
s Indri_indri.k141_2415743                                    1072 2 +     11955 -AT
i Indri_indri.k141_2415743                               I 14 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1898 2 -     16823 -TC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 4
s Kogia_breviceps.KogBre_flattened_line_3970                 64387 2 -     97402 -TC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 3
s Lagothrix_lagothricha.k141_246028                          42022 3 +    110728 CAG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60524 2 -     65777 -ac
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 407
s Lemur_catta.scaffold_24                                 14758212 2 +  30322482 -AG
i Lemur_catta.scaffold_24                                I 14 C 0
s Leontocebus_fuscicollis.k141_2994775                        2935 3 -     13097 CAC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2690 3 +      5940 CAC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2520 3 -      5717 CAC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8887 3 -     11567 CAC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10268 3 -     12945 CAC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7741 2 +     29618 -AC
i Lepilemur_ankaranensis.k141_567626                     I 14 C 0
s Lepilemur_dorsalis.k141_387009                              7737 2 +     31569 -AT
i Lepilemur_dorsalis.k141_387009                         I 14 C 0
s Lepilemur_ruficaudatus.k141_330196                          7749 2 +     24756 -AT
i Lepilemur_ruficaudatus.k141_330196                     I 14 C 0
s Lepilemur_septentrionalis.k141_360456                       7747 2 +     16388 -AT
i Lepilemur_septentrionalis.k141_360456                  I 14 C 0
s Leptonychotes_weddellii.KB714746.1                        812257 2 -   3914936 -AC
i Leptonychotes_weddellii.KB714746.1                     C 0 I 4
s Lepus_americanus.LepAme_scaffold_56121                     16594 2 +     24238 -AC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 4
s Lipotes_vexillifer.KE559953.1                             333421 2 +    662738 -TC
i Lipotes_vexillifer.KE559953.1                          C 0 I 4
s Lophocebus_aterrimus.ctg367                               331393 3 -   1826925 CAC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9019 2 +     19643 -AT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042680 2 -   6120653 -AT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079755 2 +  43346337 -ac
i Loxodonta_africana.GL010049.1                          C 0 I 4
s Macaca_arctoides.k141_1757516                              43710 3 -     61512 CAC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371371 3 -  60120075 CAC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23626 3 +     30207 CAC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           20729 3 -     24934 CAC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23578 3 +     30527 CAC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 34767 3 -     50087 CAC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44538 3 +     51645 CAC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                413707 3 - 187317192 cac
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              397930 3 +  25927173 cac
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47094 3 -     62418 CAC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                23749 3 +     24253 CAC
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43569 3 +     59329 CAC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269497 3 +    668171 CAC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20684 3 +     21031 CAC
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 1281 3 +     17132 CAC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221980 2 -    270270 -AC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 4
s Mandrillus_leucophaeus.scaffold280                        320781 3 +  24302211 CAC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355613 3 -    752769 CAC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672296 2 -    737560 -ac
i Manis_javanica.JSZB01003497.1                          C 0 I 4
s Manis_pentadactyla.KN006162.1                             219583 2 +    317179 -ac
i Manis_pentadactyla.KN006162.1                          C 0 I 4
s Marmota_marmota.CZRN01000018.1                           7499725 2 +  40650429 -ac
i Marmota_marmota.CZRN01000018.1                         C 0 I 4
s Megaderma_lyra.MegLyr_scaffold_4542                       149136 2 +    207569 -AT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 4
s Mellivora_capensis.MelCap_flattened_line_19308             24750 2 -     74585 -AT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 4
s Mesoplodon_bidens.MesBid_scaffold_6114                     79965 2 +     93471 -tc
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 3
s Mico_argentatus.k141_582562                                 9061 3 +     17804 CAC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9563 3 -     12984 CGC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17877 3 -     26561 CAC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983353 2 +  93316391 -AT
i Microcebus_murinus.CM007674.1                          I 14 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44147 2 +    145209 -AC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_2233                183370 2 +    200668 -TC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 4
s Miniopterus_natalensis.LDJU01000034.1                    6361468 2 -   8254450 -ac
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 4
s Miniopterus_schreibersii.MinSch_scaffold_23309             40369 2 -     48117 -AC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 4
s Miopithecus_ogouensis.k141_1534655                         20792 3 -     27822 CAC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7264 2 +     27589 -AC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 4
s Mirza_zaza.k141_766280                                     51142 2 -     62432 -AT
i Mirza_zaza.k141_766280                                 I 14 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351854 2 +    437263 -tc
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 4
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177530 2 +    366855 -AC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 4
s Moschus_moschiferus.MosMos_scaffold_13123                  23068 2 -     82753 -AC
i Moschus_moschiferus.MosMos_scaffold_13123              I 144 I 4
s Murina_feae.MurFea_scaffold_17764                          37405 2 +     47283 -AC
i Murina_feae.MurFea_scaffold_17764                      C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_12866             81517 2 -     86153 -AC
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 4
s Mustela_putorius.JH418006.1                             14353897 2 +  14710649 -AT
i Mustela_putorius.JH418006.1                            C 0 I 4
s Myotis_brandtii.KE162005.1                               9791455 2 +  10118263 -Ac
i Myotis_brandtii.KE162005.1                             C 0 I 3
s Myotis_davidii.KB100139.1                                4385815 2 +   6019432 -AC
i Myotis_davidii.KB100139.1                              C 0 I 4
s Myotis_lucifugus.GL429869.1                               381637 2 +   4330536 -Ac
i Myotis_lucifugus.GL429869.1                            C 0 I 3
s Myotis_myotis.MyoMyo_scaffold_66571                          464 2 +     18357 -AC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118340 2 +    130748 -AC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 4
s Nasalis_larvatus.k141_1350636                              27460 3 +     34575 CAC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467860 2 -  31847680 -AC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 4
s Neophocaena_asiaeorientalis.KZ687982.1                   1226023 2 -   7148211 -tc
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 4
s Noctilio_leporinus.NocLep_scaffold_7894                   126315 2 -    149072 -AC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 4
s Nomascus_annamensis.k141_1771965                           52197 3 -    132029 CAC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8292 3 -     16345 CAC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14177 3 +     22201 CAC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412398 3 -  22158432 CAC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24575 3 -     54323 CAC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93635017 2 + 196305487 -AT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1775 2 -      3937 -AT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563256 2 - 199412804 -AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549954 2 -   3988456 -aa
i Ochotona_princeps.JH802162.1                           C 0 I 4
s Octodon_degus.JH651603.1                                11046230 2 -  11899542 -ac
i Octodon_degus.JH651603.1                               C 0 I 4
s Odobenus_rosmarus.KB229312.1                             1450457 2 +   2017862 -AC
i Odobenus_rosmarus.KB229312.1                           C 0 I 4
s Odocoileus_virginianus.KZ100018.1                         434911 2 -    630418 -AT
i Odocoileus_virginianus.KZ100018.1                      C 0 I 4
s Okapia_johnstoni.LVCL01S0005463.1                          12903 2 +    150152 -ac
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 4
s Orcinus_orca.KB316932.1                                  8095293 2 +  10937097 -tc
i Orcinus_orca.KB316932.1                                C 0 I 4
s Orycteropus_afer.OryAfe_flattened_line_171931              12387 2 -     14239 -AC
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 3
s Oryctolagus_cuniculus.CM000791.1                       107102426 2 - 174332312 -ac
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 4
s Otolemur_crassicaudatus.k141_649260                        38414 2 -     51505 -AT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351417 2 +   1103335 -at
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402892 2 -  44047080 -AC
i Ovis_aries.CM001607.2                                  C 0 I 4
s Ovis_canadensis.OviCan_scaffold_67953                       3411 2 +     17875 -AC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 4
s Pan_troglodytes.CM009242.2                               1471290 3 - 189151597 cac
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23204 2 -    230217 -AC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 4
s Panthera_pardus.KV860321.1                              18460530 2 -  18783137 -AC
i Panthera_pardus.KV860321.1                             C 0 I 4
s Panthera_tigris.KE722367.1                               3971250 2 +   8748460 -AC
i Panthera_tigris.KE722367.1                             C 0 I 4
s Pantholops_hodgsonii.KE114653.1                          1614335 2 +   2937107 -AC
i Pantholops_hodgsonii.KE114653.1                        C 0 I 4
s Papio_anubis.CM001495.2                                   241621 3 - 183742232 cac
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8085 3 +     21308 CAC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  290662 3 -  20919399 CAC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  20740 3 -     27687 CAC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    13876 3 +     16796 CAC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20686 3 -     23640 CAC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13843 2 +     78924 -AC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 4
s Perodicticus_ibeanus.k141_1921260                          24700 2 +     31479 -AT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17064 2 -     24908 -AT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30665 2 -     56120 -AT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 4
s Phocoena_phocoena.PhoPho_flattened_line_46867              11151 2 -     15039 -TC
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 I 4
s Piliocolobus_badius.k141_2704958                             904 3 +     55023 CAC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          455 3 -     89929 CAC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1043 3 +     40849 CAC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252710 3 +  14605196 cac
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1583 2 +     22231 -AC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 7
s Pithecia_albicans.k141_1239476                             63659 3 +    207309 CAG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4753 3 -     25401 CAG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30494 3 +     58159 CAG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30770 3 +     63561 CAG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30533 3 +     51148 CAG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555500 3 -   4542175 CAG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30517 3 +     51125 CAG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3235 2 -      8168 -TC
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 I 4
s Plecturocebus_bernhardi.k141_2549090                        6921 3 +     39866 CAC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2006 3 -      9282 CAC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41410 3 -     87950 CAC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41803 3 -     88961 CAC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6502 3 -     39403 CAC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41454 3 +     87928 CAC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6499 3 -     60166 CAC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13435 3 -     67232 CAC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41351 3 -     90634 CAC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42819 3 +     89403 CAC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176416 3 - 189387572 cac
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191234 3 -   9816681 CAC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26040 3 +     69807 CAC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43235 3 -     80239 CAC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981367 2 +   4620579 -at
i Prolemur_simus.MPIZ01000396.1                          I 14 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564833 2 -   2598838 -at
i Propithecus_coquerelli.NW_012148875.1                  I 14 C 0
s Propithecus_coronatus.k141_209299                           2469 2 -      7103 -AT
i Propithecus_coronatus.k141_209299                      I 14 C 0
s Propithecus_diadema.k141_153680                             3066 2 -     11706 -AT
i Propithecus_diadema.k141_153680                        I 14 C 0
s Propithecus_edwardsi.k141_635656                            6802 2 -     30655 -AT
i Propithecus_edwardsi.k141_635656                       I 14 C 0
s Propithecus_perrieri.k141_1496898                          33127 2 +     46564 -AT
i Propithecus_perrieri.k141_1496898                      I 14 C 0
s Propithecus_tattersalli.k141_1127767                       93398 2 -     98465 -AT
i Propithecus_tattersalli.k141_1127767                   I 14 C 0
s Propithecus_verreauxi.k141_1047036                          7035 2 +     35169 -AT
i Propithecus_verreauxi.k141_1047036                     I 14 C 0
s Pteronotus_parnellii.KE847780.1                            50412 2 -     66298 -ac
i Pteronotus_parnellii.KE847780.1                        C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3464 2 -     18639 -AT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 4
s Pteropus_alecto.KB030862.1                               5839667 2 -  28871421 -AC
i Pteropus_alecto.KB030862.1                             C 0 I 4
s Pteropus_vampyrus.KN525825.1                             3536176 2 -   4952924 -AC
i Pteropus_vampyrus.KN525825.1                           C 0 I 4
s Puma_concolor.QAVW01001104.1                            18097844 2 +  38429054 -AC
i Puma_concolor.QAVW01001104.1                           C 0 I 4
s Pygathrix_cinerea.k141_1153803                             25415 3 +     91421 CAC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151908 3 -   7812017 CAC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6285 3 +     72585 CAC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51832 2 +     55069 -AC
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 4
s Rhinolophus_sinicus.LVEH01000134.1                       2913555 2 +   3329780 -Ac
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 3
s Rhinopithecus_bieti.k119_221883                            27225 3 +     27361 CAC
i Rhinopithecus_bieti.k119_221883                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120592 3 + 195417433 cac
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234833 3 -   7961872 CAC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73589 2 -    116970 -AC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 4
s Saguinus_bicolor.k141_1429097                               2797 3 +     27962 CAC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2692 3 +      6077 CAC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2783 3 +      5971 CAC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2725 2 +      5932 CA-
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1048 3 -      4390 CAC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390481 3 - 209938924 CAC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2673 3 +      5979 CAC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3415 3 -      4301 CAC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6485 2 +     16473 -AC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 4
s Saimiri_boliviensis.NW_024100920.1                       1107819 3 + 121099817 CAC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29381 3 -     47369 CAC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29770 3 -     79414 CAC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26462 3 -     34454 CAC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13868 3 -     22428 CAC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29013 3 -     47109 CAC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237082 3 +   5703754 CAC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6672 3 +     21866 CAC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114773 2 +    313613 -AC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 4
s Semnopithecus_entellus.k141_158471                         23732 3 +     27374 CAC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27251 3 +     58920 CAC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           13747 3 -     45317 CAC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21405 3 -     42441 CAC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24085 3 -     29113 CAC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27154 3 -     48123 CAC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857090 2 -   1910179 -AC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 4
s Spermophilus_dauricus.KZ294078.1                         1867083 2 +   3870691 -ac
i Spermophilus_dauricus.KZ294078.1                       C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_13525              5232 2 -     97271 -AC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 3
s Sus_scrofa.CM000828.4                                    6639901 2 +  69701581 -AT
i Sus_scrofa.CM000828.4                                  C 0 I 3
s Symphalangus_syndactylus.tarseq_199                       389657 3 +   1523678 CAC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12393 2 +     22964 -AC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 4
s Tamandua_tetradactyla.TamTet_scaffold_224794                1456 2 +      5583 -AC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 4
s Tapirus_indicus.TapInd_scaffold_7432                      190369 2 +    199430 -AC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 4
s Tapirus_terrestris.TapTer_scaffold_755                    104320 2 -    539355 -GC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 4
s Tarsius_lariang.k141_1780720                                5669 3 +      6850 AAA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5717 3 +     20590 AAA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351607 3 - 186847797 cac
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23025 2 -     33621 -AC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 4
s Tolypeutes_matacus.TolMat_scaffold_31955                   18590 2 -     31044 -AC
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 4
s Tonatia_saurophila.TonSau_scaffold_294                    478436 2 -    610378 -TC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 4
s Trachypithecus_auratus.k141_1189070                        19296 3 +     26378 CAC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     31960 3 -     78344 CAC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18617 3 +     25722 CAC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      26911 3 -     62838 CAC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           26959 3 +     46913 CAC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          7765 3 -     28527 CAC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      28850 3 -     64340 CAC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          26887 3 -     63452 CAC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8330 3 +     22490 CAC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         1758 3 -      6147 CAC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8663 3 -     13050 CAC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             253902 3 -   6242583 CAC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2862967                       59653 3 +     59866 CAC
i Trachypithecus_pileatus.k141_2862967                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172102 2 -    200418 -AC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 4
s Trichechus_manatus.JH594705.1                            6479203 2 -  10818551 -ac
i Trichechus_manatus.JH594705.1                          C 0 I 4
s Tupaia_chinensis.KB320699.1                              1832621 2 -   4065304 -AT
i Tupaia_chinensis.KB320699.1                            C 0 I 4
s Tupaia_tana.TupTan_flattened_line_394                       6937 2 -     70247 -AT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 4
s Tursiops_truncatus.MRVK01000835.1                       17360032 2 -  33153633 -tc
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 4
s Uropsilus_gracilis.UroGra_scaffold_46687                     972 2 -     21056 -AC
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 4
s Ursus_maritimus.KK499267.1                                180616 2 +   5085361 -AC
i Ursus_maritimus.KK499267.1                             C 0 I 4
s Varecia_rubra.k141_787544                                  24011 2 -     30710 -AT
i Varecia_rubra.k141_787544                              I 14 C 0
s Varecia_variegata.k141_289850                              22918 2 -    147434 -AT
i Varecia_variegata.k141_289850                          I 14 C 0
s Vicugna_pacos.KN270157.1                                   75111 2 +   5488506 -GC
i Vicugna_pacos.KN270157.1                               C 0 I 4
s Xerus_inauris.XerIna_scaffold_2302                        172861 2 -    224448 -AC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_17732         27655 2 -     86975 -AC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 4
e Nannospalax_galili.KL204047.1                             944802 2 +   3037898 I
e Perognathus_longimembris.PerPac_flattened_line_89005         421 4 +      9367 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   4016 4 -     10735 I
e Dipodomys_ordii.KN672350.1                              18949069 4 -  37912305 I
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Vulpes_lagopus.VulLag_flattened_line_12041                103757 4 -    112863 I
e Otocyon_megalotis.JAEUCK010005147.1                        38035 4 +    559221 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                196993 4 +   9404916 I
e Lycaon_pictus.CM007581.1                                41613396 4 +  59628241 I
e Canis_lupus_orion.HG994398.1                            45105822 4 -  63665305 I
e Canis_lupus_familiaris.chr16                            41614241 4 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          221106 4 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     7763 4 -     23171 I
e CanFam4.chr16                                           42504127 4 +  60362399 I
e Zapus_hudsonius.ZapHud_scaffold_230229                      2143 2 +      2695 I
e Suricata_suricatta.SurSur_flattened_line_6629             123682 2 +    196729 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    47779 3 +     77746 I
e Rattus_norvegicus.chr16                                 37021342 2 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            35444 2 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         245563 3 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    2338 3 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    91479 3 -    140218 I
e Mus_spretus.CM004101.1                                  39495417 2 + 130317789 I
e Mus_pahari.LT608297.1                                   58215984 2 +  89631738 I
e Mus_musculus.chr8                                       41686097 2 + 129401213 I
e Mus_caroli.LT608237.1                                   35591738 2 + 120012414 I
e Mungos_mungo.MunMun_flattened_line_18455                   17275 2 -     63510 I
e Microtus_ochrogaster.CM001695.1                         15961120 3 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17427984 3 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 47871 2 -    140813 I
e Jaculus_jaculus.JH725527.1                               1237896 2 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Helogale_parvula.HelPar_flattened_line_2585                29522 2 -    327341 I
e Equus_przewalskii.KK951119.1                              410751 0 -    498745 C
e Equus_caballus.CM000403.2                               21373965 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041 0 -   4378816 C
e Ellobius_talpinus.LOJH01026522.1                           11683 3 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          29708 3 +    110024 I
e Cricetulus_griseus.LT883664.1                          213113434 3 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40974 2 -     83289 I
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Allactaga_bullata.AllBul_scaffold_20030                    16712 2 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     18753 2 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3938 7 +     36723 ag---agtaa
s Acinonyx_jubatus.LLWD01001279.1                           811589 3 +   1699592 GG---A----
i Acinonyx_jubatus.LLWD01001279.1                        I 4 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18755 3 +     63021 CA---T----
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414116 3 +  29979442 gg---a----
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 4 C 0
s Ailurus_fulgens.LNAC01001112.1                            214214 3 +    347723 GG---A----
i Ailurus_fulgens.LNAC01001112.1                         I 4 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16714 3 -     61208 GA---T----
i Allactaga_bullata.AllBul_scaffold_20030                I 2 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46264 6 +     53615 AG---AGAA-
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42208 7 +     44087 AG---AGAAA
i Allochrocebus_lhoesti.k141_441277                      C 0 I 1
s Allochrocebus_preussi.k141_1993939                         14846 7 -     21945 AG---AGAAA
i Allochrocebus_preussi.k141_1993939                     C 0 I 1
s Allochrocebus_solatus.k141_3554717                         16518 7 +     32033 AG---AGAAA
i Allochrocebus_solatus.k141_3554717                     C 0 I 1
s Alouatta_belzebul.k141_1011583                             70971 3 -     84148 AG---A----
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43204 3 -     78289 AG---A----
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42650 3 +     55831 AG---A----
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41091 3 -     64179 AG---A----
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22738 3 -     24835 AG---A----
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39721 3 +     45454 AG---A----
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45419 3 +     70886 AG---A----
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7544 3 +     30854 AG---A----
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31683 3 +     42133 AG---A----
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583960 3 +   2318259 GG---A----
i Ammotragus_lervia.NIVO01071767.1                       I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175404 3 -    412891 gg---a----
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 I 3
s Antilocapra_americana.AntAmePen_scaffold_21030             49059 3 -     68529 GG---A----
i Antilocapra_americana.AntAmePen_scaffold_21030         I 4 C 0
s Aotus_azarae.k141_118258                                   49471 4 -     65372 AG---AG---
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43225 4 +     43593 AG---AG---
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671238 4 +   5030052 AG---AG---
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22880 4 -     23494 AG---AG---
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                8016 4 +      8415 AG---AG---
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14760 3 -     32367 AA---G----
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 4 I 6
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3697 3 -     15198 GG---A----
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 4 I 3
s Ateles_geoffroyi_b.tarseq_1536                               273483 3 +  21539123 AG---A----
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9649 3 +     48076 AG---A----
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4786 3 -     28759 AG---A----
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32340 3 +     44353 AG---A----
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47710 3 -     71267 AG---A----
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21770 3 -     33135 AG---A----
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4951 4 +     11645 GG---AG---
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4957 4 -     19611 GG---AG---
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955788 3 -  23207421 GG---A----
i Balaenoptera_acutorostrata.KI537508.1                  I 3 C 0
s Balaenoptera_bonaerensis.DF507193.1                         2997 3 -      4711 GG---A----
i Balaenoptera_bonaerensis.DF507193.1                    I 4 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84955 3 +    124022 GG---A----
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 4 C 0
s Bison_bison.KN261452.1                                     20488 3 +    288883 GG---A----
i Bison_bison.KN261452.1                                 I 4 C 0
s Bos_indicus.CM003047.1                                  20354875 3 +  48749331 GG---A----
i Bos_indicus.CM003047.1                                 I 4 C 0
s Bos_mutus.JH880303.1                                      753443 3 +   1948126 GG---A----
i Bos_mutus.JH880303.1                                   I 4 C 0
s Bos_taurus.CM000203.6                                   27543582 3 -  45695690 GG---A----
i Bos_taurus.CM000203.6                                  I 4 C 0
s Bubalus_bubalis.KI419123.1                               1528606 3 -   4408762 GG---A----
i Bubalus_bubalis.KI419123.1                             I 4 C 0
s Cacajao_ayresi.k141_96119                                   6675 4 +     28062 AG---AG---
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41969 4 -     91139 AG---AG---
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19495 4 +     95584 AG---AG---
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19408 4 +    119600 AG---AG---
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8954 4 +     18648 AG---AG---
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8492 4 -     13885 AG---AG---
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             560 4 -      8861 AG---AG---
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452953 4 + 189096842 AG---AG---
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                476 4 +      8664 AG---AG---
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629779 3 +  17673402 GG---A----
i Camelus_bactrianus.KN276810.1                          I 4 C 0
s Camelus_dromedarius.KN272107.1                           4664065 3 +   7040546 GG---A----
i Camelus_dromedarius.KN272107.1                         I 4 C 0
s Camelus_ferus.KB017975.1                                 1207725 3 +   1652518 GG---A----
i Camelus_ferus.KB017975.1                               I 4 C 0
s CanFam4.chr16                                           42504131 3 +  60362399 GG---A----
i CanFam4.chr16                                          I 4 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7767 3 -     23171 GG---A----
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 4 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221110 3 +   9314153 GG---A----
i Canis_lupus_dingo.QKWQ01000480.1                       I 4 C 0
s Canis_lupus_familiaris.chr16                            41614245 3 +  59632846 GG---A----
i Canis_lupus_familiaris.chr16                           I 4 C 0
s Canis_lupus_orion.HG994398.1                            45105826 3 -  63665305 GG---A----
i Canis_lupus_orion.HG994398.1                           I 4 C 0
s Capra_aegagrus.CM003241.1                               27407671 3 -  46296322 GG---A----
i Capra_aegagrus.CM003241.1                              I 4 C 0
s Capra_hircus.CM004588.1                                 26589944 3 +  44709034 GG---A----
i Capra_hircus.CM004588.1                                I 4 C 0
s Carlito_syrichta.NW_007259797.1                           269043 4 +    496798 aa---aa---
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               3986 3 +      5315 GG---A----
i Carollia_perspicillata.CarPer_scaffold_170178          I 4 I 3
s Catagonus_wagneri.CatWag_scaffold_2839                     75445 3 -    217609 GG---A----
i Catagonus_wagneri.CatWag_scaffold_2839                 I 4 C 0
s Cavia_aperea.AVPZ01000300.1                              4994705 3 +  23392119 aa---a----
i Cavia_aperea.AVPZ01000300.1                            I 4 C 0
s Cavia_porcellus.DS562891.1                               4998147 3 +  23407841 aa---a----
i Cavia_porcellus.DS562891.1                             I 4 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61248 3 -     66877 AA---A----
i Cavia_tschudii.CavTsc_scaffold_23560                   I 4 C 0
s Cebuella_niveiventris.k141_592277                           3873 4 -     12580 AG---AG---
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41928 4 +     53515 AG---AG---
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369866 4 -  26074798 AG---AG---
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6755 4 -     34880 AG---AG---
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65850 4 -     89041 AG---AG---
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          966 4 -      5494 AA---AA---
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490922 3 -  27778364 GG---A----
i Ceratotherium_simum.JH767749.1                         I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17755 3 +     27315 GG---A----
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 4 C 0
s Cercocebus_atys.KQ010504.1                                139439 7 -   4669795 ag---agaaa
i Cercocebus_atys.KQ010504.1                             C 0 I 1
s Cercocebus_chrysogaster.k141_1522556                       43179 7 +     47900 AG---AGAAA
i Cercocebus_chrysogaster.k141_1522556                   C 0 I 1
s Cercocebus_lunulatus.k141_2779015                          43012 7 -     44860 AG---AGAAA
i Cercocebus_lunulatus.k141_2779015                      C 0 I 1
s Cercocebus_torquatus.k141_2159127                          42995 7 -    148725 AG---AGAAA
i Cercocebus_torquatus.k141_2159127                      C 0 I 1
s Cercopithecus_diana.k141_132293                            10256 5 -     17524 AG---AGA--
i Cercopithecus_diana.k141_132293                        C 0 I 3
s Cercopithecus_hamlyni.k141_566925                          25978 5 -     34525 AG---AGA--
i Cercopithecus_hamlyni.k141_566925                      C 0 I 145
s Cercopithecus_neglectus.k141_858615                        30454 5 -     45857 AG---AGA--
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           23947 5 +     70610 AG---AGA--
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         20872 5 +     36323 AG---AGA--
i Cercopithecus_roloway.k141_3012935                     C 0 I 146
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11561 3 -     19938 GG---A----
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 4 I 3
s Cheirogaleus_major.k141_666340                             29369 4 -     33796 GA---AG---
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3886 4 -     15404 GG---AG---
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7756 4 -     32913 AG---AG---
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18169 4 -     40346 AG---AG---
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18424 4 +    216457 AG---AG---
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18217 4 +     39636 AG---AG---
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2802 4 +      5346 AG---AG---
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41303 4 -    112038 AG---AG---
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6875 4 +     34062 AG---AG---
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                341769 5 +  18827391 AG---AGA--
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8314 5 -     44032 AG---AGA--
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303094 5 - 135778131 ag---aga--
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10613 3 +     15858 GG---A----
i Choloepus_didactylus.ChoDid_scaffold_70559             I 4 I 4
s Choloepus_hoffmanni.KN194906.1                            602189 3 -    839153 GG---A----
i Choloepus_hoffmanni.KN194906.1                         I 4 I 4
s Colobus_angolensis.KN981557.1                             407535 7 -   2368649 ag---agaaa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377413 7 - 200372422 AG---AGAAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                                960 7 -     84244 AG---AGAAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35805989 3 +  53390261 aa---a----
i Condylura_cristata.JH655891.1                          I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1560 3 -      8242 GG---A----
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 4 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 40976 3 -     83289 CA---T----
i Cricetomys_gambianus.CriGam_scaffold_14425             I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3042 3 +     87169 AG---A----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 4 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643515 3 -   1526836 AA---G----
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 4 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3715 3 +     50838 AA---A----
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 4 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2626 3 +     36344 AA---A----
i Cuniculus_paca.CunPac_flattened_line_7025              I 4 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26388 3 +     75252 GA---A----
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 4 C 0
s Dasypus_novemcinctus.JH564415.1                          2108903 3 -   2246927 GG---A----
i Dasypus_novemcinctus.JH564415.1                        I 4 I 4
s Daubentonia_madagascariensis.ctg71                        291323 4 +  12879189 GG---AG---
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624117 3 -  35494412 gg---a----
i Delphinapterus_leucas.KZ290073.1                       I 4 C 0
s Desmodus_rotundus.KZ672289.1                            11863435 3 -  20541912 gg---a----
i Desmodus_rotundus.KZ672289.1                           I 4 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663213 3 -   1390856 GG---A----
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 4 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  137999 3 -    198055 GG---A----
i Diceros_bicornis.DicBicMic_scaffold_5955               I 4 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97203 3 -    115145 AA---A----
i Dinomys_branickii.DinBra_scaffold_10381                I 4 C 0
s Dipodomys_ordii.KN672350.1                              18949073 3 -  37912305 ca---g----
i Dipodomys_ordii.KN672350.1                             I 4 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4020 3 -     10735 CA---G----
i Dipodomys_stephensi.DipSte_scaffold_89095              I 4 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8662 3 +     14636 AA---A----
i Dolichotis_patagonum.DolPat_scaffold_80628             I 4 C 0
s Echinops_telfairi.JH980293.1                            62853057 3 - 111700974 TG---G----
i Echinops_telfairi.JH980293.1                           I 3 C 0
s Eidolon_helvum.AWHC01266696.1                               5023 3 +     19438 GG---A----
i Eidolon_helvum.AWHC01266696.1                          I 4 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238346 3 -    607251 GG---A----
i Elaphurus_davidianus.JRFZ01104969.1                    I 4 C 0
s Elephantulus_edwardii.JH947257.1                         9107085 3 -  10337057 ga---g----
i Elephantulus_edwardii.JH947257.1                       I 5 C 0
s Enhydra_lutris.KZ291758.1                               24914868 3 +  41312741 GG---A----
i Enhydra_lutris.KZ291758.1                              I 4 C 0
s Eptesicus_fuscus.JH977646.1                             12577065 2 +  14770903 -g---a----
i Eptesicus_fuscus.JH977646.1                            I 5 C 0
s Erythrocebus_patas.Contig38                               261292 7 +  21539334 AG---AGAAA
i Erythrocebus_patas.Contig38                            C 0 I 1
s Eschrichtius_robustus.EscRob_flattened_line_8968           63667 3 -    133382 gg---a----
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 3 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3884 3 +      7672 GG---A----
i Eubalaena_japonica.EubJap_flattened_line_118172        I 4 C 0
s Eulemur_albifrons.k141_51491                               13495 4 -     24895 GG---AG---
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41204 4 -     70999 GG---AG---
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85166 4 +    112731 GG---AG---
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41739 4 +     68309 GG---AG---
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52061 4 -     65740 GG---AG---
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22694 4 -     75513 GG---AG---
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46887 4 -     97555 GG---AG---
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3613 4 +     30972 GG---AG---
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41334 4 -     52037 GG---AG---
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57738 4 -    111500 GG---AG---
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245502 3 - 206538554 GG---A----
i Felis_catus.CM001381.2                                 I 4 C 0
s Felis_catus_fca126.CM031415.1                          185115287 3 - 205367284 GG---A----
i Felis_catus_fca126.CM031415.1                          I 4 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26389 3 -     30238 GG---A----
i Felis_nigripes.FelNig_flattened_line_31944             I 4 C 0
s Galago_moholi.ctg3793                                     123263 4 -    137831 GG---AG---
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6808 4 +     22493 GG---AG---
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18859 4 -     32986 GG---AG---
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17812 4 +     18121 GG---AG---
i Galeopterus_variegatus.GalVar_scaffold_74466           I 4 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90025 3 -     95226 GG---A----
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 4 C 0
s Glis_glis.GliGli_scaffold_33859                            32937 3 -     36801 AA---G----
i Glis_glis.GliGli_scaffold_33859                        I 4 I 6
s Gorilla_beringei.k141_3358147                               4273 7 -      8343 AG---AGAAA
i Gorilla_beringei.k141_3358147                          C 0 I 125
s Gorilla_gorilla.LT578341.1                                253288 7 - 186649187 ag---agaaa
i Gorilla_gorilla.LT578341.1                             C 0 I 293
s Graphiurus_murinus.GraMur_scaffold_10447                     435 3 -     78134 AA---G----
i Graphiurus_murinus.GraMur_scaffold_10447               I 4 C 0
s Hapalemur_alaotrensis.k141_330369                          13422 4 -     40692 GA---AG---
i Hapalemur_alaotrensis.k141_330369                      C 0 I 1
s Hapalemur_gilberti.k141_646465                             34823 4 +     49394 GA---AG---
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59692 4 -     66874 GA---AG---
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8565 4 -     42923 GA---AG---
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15565 4 -     53142 GA---AG---
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29524 3 -    327341 AG---A----
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7778 3 +     48891 GG---A----
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 4 C 0
s Heterocephalus_glaber.JH602082.1                         1925798 3 -  22651954 aa---a----
i Heterocephalus_glaber.JH602082.1                       I 4 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6381 3 -     36432 GG---A----
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 4 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49544 3 +     49977 AG---A----
i Hipposideros_galeritus.HipGal_scaffold_23202           I 3 C 0
s Hoolock_leuconedys.ctg274                                    141277 7 -    630532 AG---AGAAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68218 3 +     83186 AG---A----
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 4 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70088 3 +    143317 AA---A----
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 4 C 0
s Hylobates_agilis.k141_1155965                               4311 5 +     12352 -----ATAAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11494 5 +     55766 -----ATAAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051090 7 + 191637585 AG---ATAAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7799968 7 +  11177569 AG---ATAAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385507 6 +   7955117 aaaagg----
i Ictidomys_tridecemlineatus.JH393364.1                  I 4 I 6
s Indri_indri.k141_2415743                                    1074 4 +     11955 GG---AG---
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1904 3 -     16823 GG---A----
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 4 C 0
s Jaculus_jaculus.JH725527.1                               1237898 3 +   9596543 CA---T----
i Jaculus_jaculus.JH725527.1                             I 2 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64392 1 -     97402 -----A----
i Kogia_breviceps.KogBre_flattened_line_3970             I 3 C 0
s Lagothrix_lagothricha.k141_246028                          42025 3 +    110728 AG---A----
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60933 3 -     65777 GG---A----
i Lasiurus_borealis.LasBor_scaffold_16567                I 407 C 0
s Lemur_catta.scaffold_24                                 14758214 4 +  30322482 GA---AG---
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2938 4 -     13097 AG---AG---
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2693 4 +      5940 AG---AG---
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2523 4 -      5717 AG---AG---
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8890 4 -     11567 AG---AG---
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10271 4 -     12945 AG---AG---
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7743 4 +     29618 GG---AG---
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7739 4 +     31569 GG---AG---
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7751 4 +     24756 GG---AG---
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7749 4 +     16388 GG---AG---
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812263 3 -   3914936 gg---a----
i Leptonychotes_weddellii.KB714746.1                     I 4 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16600 2 +     24238 AA--------
i Lepus_americanus.LepAme_scaffold_56121                 I 4 C 0
s Lipotes_vexillifer.KE559953.1                             333427 2 +    662738 GG--------
i Lipotes_vexillifer.KE559953.1                          I 4 C 0
s Lophocebus_aterrimus.ctg367                               331396 7 -   1826925 AG---AGAAA
i Lophocebus_aterrimus.ctg367                            C 0 I 1
s Loris_lydekkerianus.k141_2031736                            9021 4 +     19643 GG---AG---
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042682 4 -   6120653 GG---AG---
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079761 3 +  43346337 ga---a----
i Loxodonta_africana.GL010049.1                          I 4 C 0
s Lycaon_pictus.CM007581.1                                41613400 3 +  59628241 GG---A----
i Lycaon_pictus.CM007581.1                               I 4 C 0
s Macaca_arctoides.k141_1757516                              43713 7 -     61512 AG---AGAAA
i Macaca_arctoides.k141_1757516                          C 0 I 1
s Macaca_assamensis.Contig5                                 371374 7 -  60120075 AG---AGAAA
i Macaca_assamensis.Contig5                              C 0 I 1
s Macaca_cyclopis.k119_263443                                23629 7 +     30207 AG---AGAAA
i Macaca_cyclopis.k119_263443                            C 0 I 1
s Macaca_fascicularis.k141_1397292                           20732 6 -     24934 AG---AGA-A
i Macaca_fascicularis.k141_1397292                       C 0 I 1
s Macaca_fuscata.k119_546792                                 23581 7 +     30527 AG---AGAAA
i Macaca_fuscata.k119_546792                             C 0 I 1
s Macaca_leonina.k141_321385                                 34770 7 -     50087 AG---AGAAA
i Macaca_leonina.k141_321385                             C 0 I 1
s Macaca_maura.k141_1103459                                  44541 7 +     51645 AG---AGAAA
i Macaca_maura.k141_1103459                              C 0 I 1
s Macaca_mulatta.NC_041758.1                                413710 7 - 187317192 ag---agaaa
i Macaca_mulatta.NC_041758.1                             C 0 I 1
s Macaca_nemestrina.KQ007038.1                              397933 7 +  25927173 ag---agaaa
i Macaca_nemestrina.KQ007038.1                           C 0 I 1
s Macaca_nigra.k141_2818840                                  47097 7 -     62418 AG---AGAAA
i Macaca_nigra.k141_2818840                              C 0 I 1
s Macaca_radiata.k141_3557992                                23752 7 +     24253 AG---AGAAA
i Macaca_radiata.k141_3557992                            C 0 I 1
s Macaca_siberu.k141_2185972                                 43572 7 +     59329 AG---AGAAA
i Macaca_siberu.k141_2185972                             C 0 I 1
s Macaca_silenus.Contig273                                  269500 7 +    668171 AG---AGAAA
i Macaca_silenus.Contig273                               C 0 I 1
s Macaca_thibetana.k99_41370                                 20687 7 +     21031 AG---AGAAA
i Macaca_thibetana.k99_41370                             C 0 I 1
s Macaca_tonkeana.k141_339739                                 1284 7 +     17132 AG---AGAAA
i Macaca_tonkeana.k141_339739                            C 0 I 1
s Macroglossus_sobrinus.MacSob_scaffold_4024                221986 3 -    270270 GG---A----
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 4 C 0
s Mandrillus_leucophaeus.scaffold280                        320784 7 +  24302211 AG---AGAAA
i Mandrillus_leucophaeus.scaffold280                     C 0 I 1
s Mandrillus_sphinx.Contig270                               355616 7 -    752769 AG---AGAAA
i Mandrillus_sphinx.Contig270                            C 0 I 1
s Manis_javanica.JSZB01003497.1                             672302 3 -    737560 gg---a----
i Manis_javanica.JSZB01003497.1                          I 4 C 0
s Manis_pentadactyla.KN006162.1                             219589 3 +    317179 gg---a----
i Manis_pentadactyla.KN006162.1                          I 4 C 0
s Marmota_marmota.CZRN01000018.1                           7499731 3 +  40650429 aa---g----
i Marmota_marmota.CZRN01000018.1                         I 4 I 6
s Megaderma_lyra.MegLyr_scaffold_4542                       149142 3 +    207569 GG---A----
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24756 3 -     74585 GG---A----
i Mellivora_capensis.MelCap_flattened_line_19308         I 4 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47873 3 -    140813 CA---T----
i Meriones_unguiculatus.MerUng_scaffold_7390             I 2 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79970 3 +     93471 gg---a----
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 3 C 0
s Mico_argentatus.k141_582562                                 9064 4 +     17804 AG---AG---
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9566 4 -     12984 AG---AG---
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17880 4 -     26561 AG---AG---
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983355 4 +  93316391 GG---AG---
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44152 3 +    145209 TG---G----
i Microgale_talazaci.MicTal_scaffold_6613                I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183376 3 +    200668 GG---A----
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 4 I 3
s Miniopterus_natalensis.LDJU01000034.1                    6361474 3 -   8254450 ag---a----
i Miniopterus_natalensis.LDJU01000034.1                  I 4 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40375 3 -     48117 AG---A----
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 4 C 0
s Miopithecus_ogouensis.k141_1534655                         20795 5 -     27822 AG---AGA--
i Miopithecus_ogouensis.k141_1534655                     C 0 I 4
s Mirounga_angustirostris.MirAng_flattened_line_54046         7270 3 +     27589 gg---a----
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 4 C 0
s Mirza_zaza.k141_766280                                     51144 4 -     62432 GG---AA---
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351860 3 +    437263 gg---a----
i Monodon_monoceros.MonMon_M_scaffold_103                I 4 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177536 3 +    366855 GG---A----
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 I 3
s Moschus_moschiferus.MosMos_scaffold_13123                  23074 3 -     82753 GG---A----
i Moschus_moschiferus.MosMos_scaffold_13123              I 4 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17277 3 -     63510 AG---A----
i Mungos_mungo.MunMun_flattened_line_18455               I 2 C 0
s Murina_feae.MurFea_scaffold_17764                          37411 3 +     47283 gg---a----
i Murina_feae.MurFea_scaffold_17764                      I 4 C 0
s Mus_caroli.LT608237.1                                   35591740 3 + 120012414 ca---t----
i Mus_caroli.LT608237.1                                  I 2 I 2
s Mus_musculus.chr8                                       41686099 3 + 129401213 ca---t----
i Mus_musculus.chr8                                      I 2 I 2
s Mus_pahari.LT608297.1                                   58215986 3 +  89631738 ca---t----
i Mus_pahari.LT608297.1                                  I 2 I 3
s Mus_spretus.CM004101.1                                  39495419 3 + 130317789 ca---t----
i Mus_spretus.CM004101.1                                 I 2 I 2
s Muscardinus_avellanarius.MusAve_scaffold_12866             81523 3 -     86153 AA---G----
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 4 I 4
s Mustela_putorius.JH418006.1                             14353903 3 +  14710649 GG---A----
i Mustela_putorius.JH418006.1                            I 4 C 0
s Myotis_brandtii.KE162005.1                               9791460 3 +  10118263 gg---a----
i Myotis_brandtii.KE162005.1                             I 3 C 0
s Myotis_davidii.KB100139.1                                4385821 3 +   6019432 GG---A----
i Myotis_davidii.KB100139.1                              I 4 C 0
s Myotis_lucifugus.GL429869.1                               381642 3 +   4330536 gg---a----
i Myotis_lucifugus.GL429869.1                            I 3 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          470 3 +     18357 GG---A----
i Myotis_myotis.MyoMyo_scaffold_66571                    I 4 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118346 3 +    130748 AG---A----
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 4 I 4
s Nannospalax_galili.KL204047.1                             944804 3 +   3037898 CA---T----
i Nannospalax_galili.KL204047.1                          I 2 C 0
s Nasalis_larvatus.k141_1350636                              27463 7 +     34575 AG---AGAAA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467866 3 -  31847680 gg---a----
i Neomonachus_schauinslandi.NINY01007730.1               I 4 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226029 3 -   7148211 gg---a----
i Neophocaena_asiaeorientalis.KZ687982.1                 I 4 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126321 3 -    149072 GG---A----
i Noctilio_leporinus.NocLep_scaffold_7894                I 4 I 6
s Nomascus_annamensis.k141_1771965                           52200 7 -    132029 AG---AGAAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8295 7 -     16345 AG---AGAAA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14180 7 +     22201 AG---AGAAA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412401 7 -  22158432 AG---AGAAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24578 7 -     54323 AG---AGAAA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                196997 3 +   9404916 GG---A----
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 4 C 0
s Nycticebus_bengalensis.LG01                             93635019 4 + 196305487 GG---AG---
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1777 4 -      3937 GG---AG---
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563258 4 - 199412804 GG---AG---
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2549960 3 -   3988456 ag---g----
i Ochotona_princeps.JH802162.1                           I 4 C 0
s Octodon_degus.JH651603.1                                11046236 3 -  11899542 aa---a----
i Octodon_degus.JH651603.1                               I 4 C 0
s Odobenus_rosmarus.KB229312.1                             1450463 3 +   2017862 gg---a----
i Odobenus_rosmarus.KB229312.1                           I 4 C 0
s Odocoileus_virginianus.KZ100018.1                         434917 3 -    630418 GG---A----
i Odocoileus_virginianus.KZ100018.1                      I 4 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12909 3 +    150152 gg---a----
i Okapia_johnstoni.LVCL01S0005463.1                      I 4 C 0
s Orcinus_orca.KB316932.1                                  8095299 3 +  10937097 gg---a----
i Orcinus_orca.KB316932.1                                I 4 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12392 3 -     14239 GA---A----
i Orycteropus_afer.OryAfe_flattened_line_171931          I 3 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102432 3 - 174332312 aa---a----
i Oryctolagus_cuniculus.CM000791.1                       I 4 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38039 3 +    559221 GG---A----
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 C 0
s Otolemur_crassicaudatus.k141_649260                        38416 4 -     51505 GG---AG---
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351419 4 +   1103335 gg---ag---
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402898 3 -  44047080 GG---A----
i Ovis_aries.CM001607.2                                  I 4 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3417 3 +     17875 GG---A----
i Ovis_canadensis.OviCan_scaffold_67953                  I 4 C 0
s Pan_troglodytes.CM009242.2                               1471293 7 - 189151597 ag---agaaa
i Pan_troglodytes.CM009242.2                             C 0 I 301
s Panthera_onca.PanOnc_flattened_line_3271                   23210 3 -    230217 GG---A----
i Panthera_onca.PanOnc_flattened_line_3271               I 4 C 0
s Panthera_pardus.KV860321.1                              18460536 3 -  18783137 GG---A----
i Panthera_pardus.KV860321.1                             I 4 C 0
s Panthera_tigris.KE722367.1                               3971256 3 +   8748460 GG---A----
i Panthera_tigris.KE722367.1                             I 4 C 0
s Pantholops_hodgsonii.KE114653.1                          1614341 3 +   2937107 GG---A----
i Pantholops_hodgsonii.KE114653.1                        I 4 C 0
s Papio_anubis.CM001495.2                                   241624 7 - 183742232 ag---aggaa
i Papio_anubis.CM001495.2                                C 0 I 1
s Papio_cynocephalus.k141_1507553                             8088 7 +     21308 AG---AGGAA
i Papio_cynocephalus.k141_1507553                        C 0 I 1
s Papio_hamadryas.Contig39                                  290665 7 -  20919399 AG---AGGAA
i Papio_hamadryas.Contig39                               C 0 T 1393
s Papio_kindae.k141_2214839                                  20743 7 -     27687 AG---AGGAA
i Papio_kindae.k141_2214839                              C 0 I 1
s Papio_papio.k141_799093                                    13879 7 +     16796 AG---AGGAA
i Papio_papio.k141_799093                                C 0 I 1
s Papio_ursinus.k141_2278143                                 20689 7 -     23640 AG---AGGAA
i Papio_ursinus.k141_2278143                             C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13849 3 +     78924 AG---A----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Perodicticus_ibeanus.k141_1921260                          24702 4 +     31479 GG---AG---
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17066 4 -     24908 GG---AG---
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         425 3 +      9367 GA---G----
i Perognathus_longimembris.PerPac_flattened_line_89005   I 4 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30671 3 -     56120 AA---A----
i Petromus_typicus.PetTyp_scaffold_17301                 I 4 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11157 3 -     15039 GG---A----
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 4 C 0
s Piliocolobus_badius.k141_2704958                             907 7 +     55023 AG---AGAAA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          458 7 -     89929 AG---AGAAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1046 7 +     40849 AG---AGAAA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252713 7 +  14605196 ag---agaaa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1592 2 +     22231 G----G----
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 7 C 0
s Pithecia_albicans.k141_1239476                             63662 4 +    207309 AG---AG---
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4756 4 -     25401 AG---AG---
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30497 4 +     58159 AG---AG---
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30773 4 +     63561 AG---AG---
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30536 4 +     51148 AG---AG---
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555503 4 -   4542175 AG---AG---
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30520 4 +     51125 AG---AG---
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3241 3 -      8168 GG---A----
i Platanista_gangetica.PlaMin_flattened_line_167872      I 4 C 0
s Plecturocebus_bernhardi.k141_2549090                        6924 4 +     39866 AG---AA---
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2009 4 -      9282 AG---AA---
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41413 4 -     87950 AG---AA---
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41806 4 -     88961 AG---AA---
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6505 4 -     39403 AG---AA---
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41457 4 +     87928 AG---AA---
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6502 4 -     60166 AG---AA---
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13438 4 -     67232 AG---AA---
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41354 4 -     90634 AG---AA---
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42822 4 +     89403 AG---AA---
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176419 7 - 189387572 ag---agaaa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191237 7 -   9816681 AG---AGAAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26043 7 +     69807 AG---AGAAA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43238 7 -     80239 AG---AGAAA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981369 4 +   4620579 ga---ag---
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564835 4 -   2598838 gg---ag---
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2471 4 -      7103 GG---AG---
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3068 4 -     11706 GG---AG---
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6804 4 -     30655 GG---AG---
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33129 4 +     46564 GG---AG---
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93400 4 -     98465 GG---AG---
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7037 4 +     35169 GG---AG---
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            35446 3 +     52041 ca---t----
i Psammomys_obesus.NESX01036366.1                        I 2 C 0
s Pteronotus_parnellii.KE847780.1                            50418 3 -     66298 gg---a----
i Pteronotus_parnellii.KE847780.1                        I 4 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3470 3 -     18639 GG---A----
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 4 C 0
s Pteropus_alecto.KB030862.1                               5839673 3 -  28871421 GG---A----
i Pteropus_alecto.KB030862.1                             I 4 C 0
s Pteropus_vampyrus.KN525825.1                             3536182 3 -   4952924 GG---A----
i Pteropus_vampyrus.KN525825.1                           I 4 C 0
s Puma_concolor.QAVW01001104.1                            18097850 3 +  38429054 GG---A----
i Puma_concolor.QAVW01001104.1                           I 4 C 0
s Pygathrix_cinerea.k141_1153803                             25418 7 +     91421 AG---AGAAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151911 7 -   7812017 AG---AGAAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6288 7 +     72585 AG---AGAAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51838 3 +     55069 GG---A----
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 4 C 0
s Rattus_norvegicus.chr16                                 37021344 3 -  90668790 ta---t----
i Rattus_norvegicus.chr16                                I 2 I 2
s Rhinolophus_sinicus.LVEH01000134.1                       2913560 3 +   3329780 gg---a----
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 C 0
s Rhinopithecus_bieti.k119_221883                            27228 7 +     27361 AG---AGAAA
i Rhinopithecus_bieti.k119_221883                        C 0 N 0
s Rhinopithecus_roxellana.NC_044550.1                    104120595 7 + 195417433 ag---agaaa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             234836 7 -   7961872 AG---AGAAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73595 3 -    116970 GG---A----
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 4 C 0
s Saguinus_bicolor.k141_1429097                               2800 4 +     27962 AG---AG---
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2695 4 +      6077 AG---AG---
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2786 4 +      5971 AG---AG---
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2727 3 +      5932 -G---AG---
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1051 4 -      4390 AG---AG---
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390484 4 - 209938924 AG---AG---
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2676 4 +      5979 AG---AG---
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3418 4 -      4301 AG---AG---
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6491 3 +     16473 GG---A----
i Saiga_tatarica.SaiTat_scaffold_39512                   I 4 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107822 4 + 121099817 AG---AG---
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29384 4 -     47369 AG---AG---
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29773 4 -     79414 AG---AG---
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26465 4 -     34454 AG---AG---
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13871 4 -     22428 AG---AG---
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29016 4 -     47109 AG---AG---
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237085 4 +   5703754 AG---AG---
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6675 4 +     21866 AG---AG---
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114779 3 +    313613 GA---G----
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 4 C 0
s Semnopithecus_entellus.k141_158471                         23735 7 +     27374 AG---AGAAA
i Semnopithecus_entellus.k141_158471                     C 0 I 4
s Semnopithecus_hypoleucos.k141_1910531                      27254 7 +     58920 AG---AGAAA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 I 4
s Semnopithecus_johnii.k141_843753                           13750 7 -     45317 AG---AGAAA
i Semnopithecus_johnii.k141_843753                       C 0 I 4
s Semnopithecus_priam.k141_714795                            21408 7 -     42441 AG---AGAAA
i Semnopithecus_priam.k141_714795                        C 0 I 4
s Semnopithecus_schistaceus.k141_1432920                     24088 7 -     29113 AG---AGAAA
i Semnopithecus_schistaceus.k141_1432920                 C 0 I 4
s Semnopithecus_vetulus.k141_244474                          27157 7 -     48123 AG---AGAAA
i Semnopithecus_vetulus.k141_244474                      C 0 I 4
s Solenodon_paradoxus.SolPar_flattened_line_126            1857096 3 -   1910179 TG---A----
i Solenodon_paradoxus.SolPar_flattened_line_126          I 4 I 5
s Spermophilus_dauricus.KZ294078.1                         1867089 3 +   3870691 aa---g----
i Spermophilus_dauricus.KZ294078.1                       I 4 I 6
s Spilogale_gracilis.SpiGra_flattened_line_13525              5237 3 -     97271 GG---A----
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123684 3 +    196729 AG---A----
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                    6639906 3 +  69701581 GG---A----
i Sus_scrofa.CM000828.4                                  I 3 C 0
s Symphalangus_syndactylus.tarseq_199                       389660 7 +   1523678 AG---AGAAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12399 3 +     22964 GG---A----
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 4 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1462 3 +      5583 AG---A----
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 4 I 4
s Tapirus_indicus.TapInd_scaffold_7432                      190375 3 +    199430 AG---A----
i Tapirus_indicus.TapInd_scaffold_7432                   I 4 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104326 3 -    539355 ag---a----
i Tapirus_terrestris.TapTer_scaffold_755                 I 4 C 0
s Tarsius_lariang.k141_1780720                                5672 1 +      6850 A---------
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5720 4 +     20590 AA---AA---
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351610 7 - 186847797 ag---agaaa
i Theropithecus_gelada.CM009954.1                        C 0 I 1
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23031 3 -     33621 AA---A----
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 4 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18596 3 -     31044 GG---A----
i Tolypeutes_matacus.TolMat_scaffold_31955               I 4 I 4
s Tonatia_saurophila.TonSau_scaffold_294                    478442 3 -    610378 gg---a----
i Tonatia_saurophila.TonSau_scaffold_294                 I 4 I 3
s Trachypithecus_auratus.k141_1189070                        19299 7 +     26378 AG---AGAAA
i Trachypithecus_auratus.k141_1189070                    C 0 I 4
s Trachypithecus_crepusculus.k141_539312                     31963 7 -     78344 AG---AGAAA
i Trachypithecus_crepusculus.k141_539312                 C 0 I 4
s Trachypithecus_cristatus.k141_180416                       18620 7 +     25722 AG---AGAAA
i Trachypithecus_cristatus.k141_180416                   C 0 I 4
s Trachypithecus_francoisi.k141_1453105                      26914 7 -     62838 AG---AGAAA
i Trachypithecus_francoisi.k141_1453105                  C 0 I 4
s Trachypithecus_geei.k141_1001272                           26962 7 +     46913 AG---AGAAA
i Trachypithecus_geei.k141_1001272                       C 0 I 4
s Trachypithecus_germaini.k141_57262                          7768 7 -     28527 AG---AGAAA
i Trachypithecus_germaini.k141_57262                     C 0 I 4
s Trachypithecus_hatinhensis.k141_31479                      28853 7 -     64340 AG---AGAAA
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 4
s Trachypithecus_laotum.k141_928651                          26890 7 -     63452 AG---AGAAA
i Trachypithecus_laotum.k141_928651                      C 0 I 4
s Trachypithecus_leucocephalus.k141_96450                     8333 7 +     22490 AG---AGAAA
i Trachypithecus_leucocephalus.k141_96450                C 0 I 4
s Trachypithecus_melamera.k141_591572                         1761 7 -      6147 AG---AGAAA
i Trachypithecus_melamera.k141_591572                    C 0 I 4
s Trachypithecus_obscurus.k141_848057                         8666 7 -     13050 AG---AGAAA
i Trachypithecus_obscurus.k141_848057                    C 0 I 4
s Trachypithecus_phayrei.ctg124                             253905 7 -   6242583 AG---AGAAA
i Trachypithecus_phayrei.ctg124                          C 0 I 4
s Trachypithecus_pileatus.k141_2862967                       59656 7 +     59866 AG---AGAAA
i Trachypithecus_pileatus.k141_2862967                   C 0 N 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172108 3 -    200418 AG---A----
i Tragulus_javanicus.TraJav_scaffold_3462                I 4 C 0
s Trichechus_manatus.JH594705.1                            6479209 3 -  10818551 ga---a----
i Trichechus_manatus.JH594705.1                          I 4 C 0
s Tupaia_chinensis.KB320699.1                              1832627 4 -   4065304 GG---AG---
i Tupaia_chinensis.KB320699.1                            I 4 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6943 4 -     70247 GG---AG---
i Tupaia_tana.TupTan_flattened_line_394                  I 4 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360038 3 -  33153633 gg---a----
i Tursiops_truncatus.MRVK01000835.1                      I 4 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     978 3 -     21056 GA---A----
i Uropsilus_gracilis.UroGra_scaffold_46687               I 4 C 0
s Ursus_maritimus.KK499267.1                                180622 3 +   5085361 GG---A----
i Ursus_maritimus.KK499267.1                             I 4 C 0
s Varecia_rubra.k141_787544                                  24013 4 -     30710 GG---AG---
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22920 4 -    147434 GG---AG---
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75117 3 +   5488506 GG---A----
i Vicugna_pacos.KN270157.1                               I 4 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103761 3 -    112863 GG---A----
i Vulpes_lagopus.VulLag_flattened_line_12041             I 4 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172867 3 -    224448 AA---G----
i Xerus_inauris.XerIna_scaffold_2302                     I 4 I 6
s Zalophus_californianus.ZalCal_flattened_line_17732         27661 3 -     86975 gg---a----
i Zalophus_californianus.ZalCal_flattened_line_17732     I 4 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2145 3 +      2695 CA---G----
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 2 I 22
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    47779 3 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         245563 3 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    2338 3 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    91479 3 -    140218 I
e Microtus_ochrogaster.CM001695.1                         15961120 3 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17427984 3 +  29670104 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751 0 -    498745 C
e Equus_caballus.CM000403.2                               21373965 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041 0 -   4378816 C
e Ellobius_talpinus.LOJH01026522.1                           11683 3 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          29708 3 +    110024 I
e Cricetulus_griseus.LT883664.1                          213113434 3 - 224834208 I
e Cercopithecus_petaurista.k141_42573                         1815 26 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       25658 26 -     32606 I
e Cercopithecus_mona.ctg39                                  268381 25 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  362669 26 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           10074 25 -     25376 I
e Cercopithecus_cephus.k141_4183004                           5453 26 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        25484 26 -     40656 I
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       3945 302 +     36723 a-a-------tta-ctggc-cggg-ca-cagtggctcatgcctgtaatc-gcagccctttgggaggccga-ggcaggtggatcagcaggtcaggagttcgagaccagt-ctgaccaacatggtgaaa-ccctgtctct-actaaaaatac-a--aa-a-a-a-attagccga-gcatggtggcgggcgcctataa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacctgggaggc-agaggttg-cag-tgagccgacattgc--accactgta---ctccagcctgggcaa-cagagagagactccatctcaaaaaaaaa----aaaa
s Allenopithecus_nigroviridis.k141_3755588                   46270 300 +     53615 A-AAAA----TTA-CTggc-cggggcg-cagtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggagatcaagaccatc-ctggctaacacggtgaaa-ctccatctct-actaaaaatac-a--ga-a-aaa-attagccgc-gtgtggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagcgagactccatctcc----aaag----a---
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42216 299 +     44087 A-AAAA----TTA-TTggc-cagg-cg-cagtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggagatcaagactgtc-ctggctaacacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtgtggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ccccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Allochrocebus_lhoesti.k141_441277                      I 1 C 0
s Allochrocebus_preussi.k141_1993939                         14854 299 -     21945 A-AAAA----TTA-TTggc-cagg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggagatcaagactgtc-ctggctaacacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtgtggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagctgagattgc--accactgca---ccccagcctgggtga-cagagcgagactccatctca----aaag----a---
i Allochrocebus_preussi.k141_1993939                     I 1 I 3
s Allochrocebus_solatus.k141_3554717                         16526 299 +     32033 A-AAAA----TTA-CTggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggagatcaagactgtc-ctggctaacacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtgtggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Allochrocebus_solatus.k141_3554717                     I 1 C 0
s Cercocebus_atys.KQ010504.1                                139447 299 -   4669795 a-a----aaatta-ctggc-tggg-cg-cagtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaagaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Cercocebus_atys.KQ010504.1                             I 1 C 0
s Cercocebus_chrysogaster.k141_1522556                       43187 299 +     47900 A-AAAA----TTA-CTggc-tggg-cg-cagtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggacatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaagaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Cercocebus_chrysogaster.k141_1522556                   I 1 C 0
s Cercocebus_lunulatus.k141_2779015                          43020 299 -     44860 A-AAAA----TTA-CTggc-tggg-cg-cagtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaagaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Cercocebus_lunulatus.k141_2779015                      I 1 C 0
s Cercocebus_torquatus.k141_2159127                          43003 299 -    148725 A-AAAA----TTA-CTggc-tggg-cg-cagtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaagaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Cercocebus_torquatus.k141_2159127                      I 1 C 0
s Cercopithecus_ascanius.k141_3120866                        25510  15 -     40656 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCATCTCA----AAAG----A---
i Cercopithecus_ascanius.k141_3120866                    I 26 I 4
s Cercopithecus_cephus.k141_4183004                           5479  15 +     20796 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCATCTCA----AAAG----A---
i Cercopithecus_cephus.k141_4183004                      I 26 I 4
s Cercopithecus_diana.k141_132293                            10264 300 -     17524 A-AAAA----TTA-CTggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggaaatcaagaccatc-ctggctaacacagtgaaa-ccccatctct-actaaaaatac-aa-aa-a-aaa-attagccgg-gtgtggtgacacatgcctgtaa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagctgagattgc--accactgca---ctccagcctgggcga-cagagcgagactccatctca----aaag----a---
i Cercopithecus_diana.k141_132293                        I 3 C 0
s Cercopithecus_hamlyni.k141_566925                          26128 157 -     34525 -----------------------------------------------------------------------------------------------------------------------------------------------------------------a-attagccgg-gtgtggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagcgagactccatctca----aaag----a---
i Cercopithecus_hamlyni.k141_566925                      I 145 C 0
s Cercopithecus_lowei.k141_2101310                           10099  16 -     25376 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCATCTCA----AAAG----A---
i Cercopithecus_lowei.k141_2101310                       I 25 I 3
s Cercopithecus_albogularis.ctg5                                  362695  15 -  39242232 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCATCTCA----AAAG----A---
i Cercopithecus_albogularis.ctg5                               I 26 I 3
s Cercopithecus_mona.ctg39                                  268406  16 +  21565898 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCATCTCA----AAAG----A---
i Cercopithecus_mona.ctg39                               I 25 I 3
s Cercopithecus_neglectus.k141_858615                        30459 303 -     45857 A-AAAAAAAATTA-CTggc-cagg-cg-cggtgactcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggagatcaagaccatc-ctggctaacacggtgaaa-tcccgtctct-actaaaaatac-aa-a--a-aaa-attagccgg-gtgtggtgacacatgcctgtaa--tcccagctactcgggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagcgagactccgactca----aaag----a---
i Cercopithecus_neglectus.k141_858615                    C 0 I 3
s Cercopithecus_nictitans.k141_2995370                       25684  15 -     32606 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCATCTCA----AAAG----A---
i Cercopithecus_nictitans.k141_2995370                   I 26 I 3
s Cercopithecus_petaurista.k141_42573                         1841  15 +      8499 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCATCTCA----AAAG----A---
i Cercopithecus_petaurista.k141_42573                    I 26 I 3
s Cercopithecus_pogonias.k141_6079                           23952 303 +     70610 A-AAAAAAAATTA-CTggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggagatcaagaccatc-ctggctaacacggtgaaa-ccccatctct-actaaaaatac-aa-a--a-aaa-attagccgg-gtgtggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagcgagactccatctca----aaag----a---
i Cercopithecus_pogonias.k141_6079                       C 0 I 4
s Cercopithecus_roloway.k141_3012935                         21023 156 +     36323 -------------------------------------------------------------------------------------------------------------------------------------------------------------------attagccgg-gtgtggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagcgagactccatctca----aaag----a---
i Cercopithecus_roloway.k141_3012935                     I 146 C 0
s Chlorocebus_aethiops.ctg25                                341774 300 +  18827391 A-AAAA----TTA-CTggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggagatcaagactgtc-ctggctaacacggtgaaa-ccccatctct-actaaaaatac-aa-aa-a-aaa-attagccgg-gtgtggtgacacatgcctgcaa--tcccagctactcaggaggctgagccaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagcgagactccatctca----aaag----a---
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8319 301 -     44032 A-AAAA----TTA-CTggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggagatcaagactgtc-ctggctaacacggtgaaa-ccccatctct-actaaaaatac-aa-aa-aaaaa-attagccgg-gtgtggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agagcttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagcgagactccatctca----aaag----a---
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303099 300 - 135778131 a-a----aaatta-ctggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggagatcaagactgtc-ctggctaacacggtgaaa-ccccatctct-actaaaaatac-aa-aa-a-aaa-attagccgg-gtgtggtgacacacgcctgcaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-ggaggttg-cag-tgagccgagattgc--accactgca---cgccagcctgggcaa-cagagtgagactctgtctca----aaag----a---
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407542 303 -   2368649 a-a----aaatta-ctggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccttttgggaggccga-ggcaggtggatcacgaggtcagaagatcgagaccatc-ctggctaacacggtgaaa-ccccgtctct-actaaaaatac-a--aaaa-aaa-attagccgg-gtgtggtgacacacgcct-taa--tcccagctactcgggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cgg-tgagccaagattgt--gccactgca---ctccagcctgggtga-cagagcgagactccatctca----aaaaaaaga---
i Colobus_angolensis.KN981557.1                          C 0 I 4
s Colobus_guereza.LG01                                      377420 302 - 200372422 A-AAAA----TTA-CTggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccttttgggaggccaa-ggcaggtggatcacgaggtcagaagatcgagaccatc-ctggctaacacggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtgtggtgacacacgcct-taa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cgg-tgagccaagattgt--gccactgca---ctccagcctgggtga-cagagcgagactccatctca----aaaaaaaga---
i Colobus_guereza.LG01                                   C 0 I 4
s Colobus_polykomos.k141_906115                                967 302 -     84244 A-AAAA----TTA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccttttgggaggccga-ggcaggtggatcacgaggtcagaagatcgagaccatc-ctggctaacacggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtgtggtgacacacgcct-taa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cgg-tgagccaagattgt--gccactgca---ctccagcctgggtga-cagagcgagactccatctca----aaaaaaaga---
i Colobus_polykomos.k141_906115                          C 0 I 4
s Erythrocebus_patas.Contig38                               261300 299 +  21539334 A-AAAA----TTA-CTggc-cggg-cg-cggtgtcttacgcctgtaatc-ccagccctttgggaggccga-gacaggtggatcactaggtcaggagatcaagactgtc-ctggctaacacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtgtggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-agcccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagcgagaccccatctca----aaag----a---
i Erythrocebus_patas.Contig38                            I 1 C 0
s Gorilla_beringei.k141_3358147                               4405 159 -      8343 --------------------------------------------------------------------------------------------------------------------------------------------------------------------ttagccga-gcatggtggcgggcgcctataa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacctgggaggc-agaggttg-cag-tgagccaacattgc--accactgta---ctccagcctgggcaa-cagagagagactccatctcaaaaaaaaa----a---
i Gorilla_beringei.k141_3358147                          I 125 C 0
s Gorilla_gorilla.LT578336.1                                 69755 302 +  33314783 a-a----atatta-ctggc-tggg-cg-cagtggctcatgcctgtaatc-gcagccctttgggaggccga-ggcaggtggatcatcaggtcaggagttcgagaccagt-ctgaccaacatggtgaaa-ccctgtctct-actaaaaatac-a--aa-a-a-a-attagccga-gcatggtggcgggcacctataa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacctgggaggc-agaggttg-cag-tgagccgacattgc--accactgta---ctccagcctgggcaa-cagagagagactccatctcaaaaaaaaa----a---
i Gorilla_gorilla.LT578336.1                             I 62 I 5
s Hoolock_leuconedys.ctg274                                    141284 297 -    630532 A-AAA-----TTA-CTggc-gggg-cg-cggtggctcccacctgtaatc-ccagccctttgggaggccga-ggcaggtggatcatcaggtcaggagttcgagaccagt-ctgaccaacatggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-a-a-attagccag-gcatggtggcgggtgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacctg-aacccgggaagc-agaagttg-cag-taagctgacattga--gccactgta---ctccagcctgggcgg-cagagcgagactccatctca----aaaa----a---
i Hoolock_leuconedys.ctg274                                 C 0 I 5
s Hylobates_agilis.k141_1155965                               4316 298 +     12352 A-AAAA----TTA-CTggc-gggg-cg-cagtggctcccgcctgtaatc-ccaaccctttgggaggccaa-ggcaggtggatcatcaggtcaggagttcgagaccagt-ctgaccaacatggtgaaa-ccccatctct-accaaaaatac-a--aa-a-a-a-attagccgg-gcatggtggcgggtgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccgggaggc-agaagttg-cag-tgagccgacattga--gccactgta---ctccagcctgggtga-cagagcgagactccatctca----aaaa----a---
i Hylobates_agilis.k141_1155965                          C 0 I 2
s Hylobates_klossii.k141_738755                              11499 298 +     55766 A-AAAA----TTA-CTggc-gggg-cg-cagtggctcccgcctgtaatc-ccaaccctttgggaggccaa-ggcaggtggatcatcaggtcaggagttcgagacaagt-ctgaccaacatggtgaaa-ccccatctct-accaaaaatac-a--aa-a-a-a-attagccgg-gcatggtggcgggtgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccgggaggc-agaagttg-cag-tgagccgacattga--gccactgta---ctccagcctgggtga-cagagcgagactccatctca----aaaa----a---
i Hylobates_klossii.k141_738755                          C 0 I 3
s Hylobates_pileatus_b.LG02                                       2051097 298 + 191637585 A-AAAA----TTA-CTggc-gggg-cg-cagtggctcccgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcatcaggtcaggagttcgagaccagt-ctgaccaacatggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-a-a-attagccgg-gcatggtggcaggtgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccgggaggc-agaagttg-cag-tgagccgacattga--gccactgta---ctccagcctgggcga-cagagcaagactccatctca----aaaa----a---
i Hylobates_pileatus_b.LG02                                     C 0 I 3
s Hylobates_pileatus_a.tarseq_633                            7799975 298 +  11177569 A-AAAA----TTA-CTggc-gggg-cg-cagtggctcccgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcatcaggtcaggagttcgagaccagt-ctgaccaacatggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-a-a-attagccgg-gcatggtggcaggtgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccgggaggc-agaagttg-cag-tgagccgacattga--gccactgta---ctccagcctgggcga-cagagcaagactccatctca----aaaa----a---
i Hylobates_pileatus_a.tarseq_633                          C 0 I 3
s Lophocebus_aterrimus.ctg367                               331404 300 -   1826925 AAAAAA----TTA-CTggc-tggg-tg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Lophocebus_aterrimus.ctg367                            I 1 C 0
s Macaca_arctoides.k141_1757516                              43721 299 -     61512 A-AAAA----TTA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgtctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Macaca_arctoides.k141_1757516                          I 1 C 0
s Macaca_assamensis.Contig5                                 371382 299 -  60120075 A-AAAA----TTA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgtctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_263443                                23637 298 +     30207 A-AAAA-----TA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggcgaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgtctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagatttc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Macaca_cyclopis.k119_263443                            I 1 C 0
s Macaca_fascicularis.k141_1397292                           20739 299 -     24934 A-AAAA----ATA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggcgaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgtctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagatttc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Macaca_fascicularis.k141_1397292                       I 1 C 0
s Macaca_fuscata.k119_546792                                 23589 298 +     30527 A-AAAA-----TA-CTggc-tggg-tg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggcgaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgtctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Macaca_fuscata.k119_546792                             I 1 C 0
s Macaca_leonina.k141_321385                                 34778 299 -     50087 A-AAAA----TTA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggcgaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgtctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Macaca_leonina.k141_321385                             I 1 C 0
s Macaca_maura.k141_1103459                                  44549 299 +     51645 A-AAAA----TTA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggcgaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgtctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcaa-cagagtgagactccatctca----aaag----a---
i Macaca_maura.k141_1103459                              I 1 C 0
s Macaca_mulatta.NC_041758.1                                413718 299 - 187317192 a-a----aaaata-ctggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggcgaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgtctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Macaca_mulatta.NC_041758.1                             I 1 C 0
s Macaca_nemestrina.KQ007038.1                              397941 299 +  25927173 a-a----aaatta-ctggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggcgaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgtctgtaa--tcccagctactcaggaggctgaggcaggagaatttcttg-aaccttggaggt-ggaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Macaca_nemestrina.KQ007038.1                           I 1 C 0
s Macaca_nigra.k141_2818840                                  47105 299 -     62418 A-AAAA----TTA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgtctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Macaca_nigra.k141_2818840                              I 1 C 0
s Macaca_radiata.k141_3557992                                23760 299 +     24253 A-AAAA----TTA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgtctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Macaca_radiata.k141_3557992                            I 1 C 0
s Macaca_siberu.k141_2185972                                 43580 299 +     59329 A-AAAA----TTA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgtctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagaatgagactccatctca----aaag----a---
i Macaca_siberu.k141_2185972                             I 1 C 0
s Macaca_silenus.Contig273                                  269508 299 +    668171 A-AAAA----TTA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagactatc-ctggcgaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgtctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Macaca_silenus.Contig273                               I 1 C 0
s Macaca_thibetana.k99_41370                                 20695 299 +     21031 A-AAAA----TTA-CTggc-tggg-tg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgtctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Macaca_thibetana.k99_41370                             I 1 C 0
s Macaca_tonkeana.k141_339739                                 1292 299 +     17132 A-AAAA----TTA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgtctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Macaca_tonkeana.k141_339739                            I 1 C 0
s Mandrillus_leucophaeus.scaffold280                        320792 299 +  24302211 A-AAAA----TTA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaagaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Mandrillus_leucophaeus.scaffold280                     I 1 C 0
s Mandrillus_sphinx.Contig270                               355624 299 -    752769 A-AAAA----TTA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaagaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Mandrillus_sphinx.Contig270                            I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         20804 299 -     27822 A-AAAA----TTA-CTggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggagatcaagaccatc-ctggctaacacagtgaaa-ccacatctct-actaaaaatac-aa-a--a-aaa-attagccgg-gtgtggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagcgagactccatctca----aaag----g---
i Miopithecus_ogouensis.k141_1534655                     I 4 C 0
s Nasalis_larvatus.k141_1350636                              27470 302 +     34575 A-AAAA----TTA-CTggc-cgga-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-ccctgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcttgggcga-cagagcgagactccatctca----aaaaaaaga---
i Nasalis_larvatus.k141_1350636                          C 0 I 1
s Nomascus_annamensis.k141_1771965                           52207 298 -    132029 A-AAAA----TTA-CTggc-gggg-cg-cagtggctcccgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcatcaggtcaggagttcgagaccagt-ctgaccaacatggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-a-a-attagccgg-gcatggtggcgggtggctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccgggaggc-agaagttg-cag-tgagccgacattga--gccactgta---ctccagcctgggcga-cagagcgagactccatctca----aaaa----a---
i Nomascus_annamensis.k141_1771965                       C 0 I 3
s Nomascus_concolor.k141_735679                               8302 298 -     16345 A-AAAA----TTA-CTggc-gggg-cg-cagtggctcccgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcatcaggtcaggagttcgagacaagt-ctgaccaacatggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-a-a-attagccgg-gcatggtggcgggtggctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccgggaggc-agaagttg-cag-tgagccgacattga--gccactgta---ctccagcctgggcga-cagagcgagactccatctca----aaaa----a---
i Nomascus_concolor.k141_735679                          C 0 I 3
s Nomascus_gabriellae.k141_57920                             14187 298 +     22201 A-AAAA----TTA-CTggc-aggg-cg-cagtggctcccgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcatcaggtcaggagttcgagaccagt-ctgaccaacatggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-a-a-attagctgg-gcatggtggcgggtggctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccgggaggc-agaagttg-cag-tgagccgacattga--gccactgta---ctccagcctgggcga-cagagcgagactccatctca----aaaa----a---
i Nomascus_gabriellae.k141_57920                         C 0 I 3
s Nomascus_siki_b.tarseq_93                            8412408 298 -  22158432 A-AAAA----TTA-CTggc-gggg-cg-cagtggctcccgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcatcaggtcaggagttcgagaccagt-ctgaccaacatggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-a-a-attagccgg-gcatggtggcgggtggctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccgggaggc-agaagttg-cag-tgagccgacattga--gccactgta---ctccagcctgggcga-cagagcgagactccatctca----aaaa----a---
i Nomascus_siki_b.tarseq_93                          C 0 I 3
s Nomascus_siki_a.k141_941534                                  24585 298 -     54323 A-AAAA----TTA-CTggc-gggg-cg-cagtggctcccgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcatcaggtcaggagttcgagaccagt-ctgaccaacatggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-a-a-attagccgg-gcatggtggcgggtggctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccgggaggc-agaagttg-cag-tgagccgacattga--gccactgta---ctccagcctgggcga-cagagcgagactccatctca----aaaa----a---
i Nomascus_siki_a.k141_941534                              C 0 I 3
s Pan_troglodytes.NBAG03001968.1                              2314 303 -     50635 a-a----aaatta-ctggc-cagg-cg-cagtggctcatgcctgtaatc-gcagccctttgggaggccgagggcaggtggatcatcaggtcaggagttcgagaccagt-ctgaccaacatggtgaaa-ccctgtctct-actaaaaatac-a--aa-a-a-a-attag-cgaggcatggtggcgggtgcctata----tccagctactcaggaggctgaggcaggagaatcacttg-aacctgggaggc-agaggttg-cagttgagccgacattgc--accactgta---ctccagcctgggcaa-cagagagagactccatctcaaaaaaaaa----aa--
i Pan_troglodytes.NBAG03001968.1                         I 899 I 53
s Papio_anubis.CM001495.2                                   241632 299 - 183742232 a-a----aaatta-ctggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactgcatctca----aaag----a---
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_1507553                             8096 299 +     21308 A-AAAA----TTA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Papio_cynocephalus.k141_1507553                        I 1 C 0
s Papio_hamadryas.Contig39                                  289279 155 -  20919399 --------------------------------------------------------------------------------------------------------------------------------------------------------------------ttagccgg-gtatggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactgcatctca----aaag----a---
i Papio_hamadryas.Contig39                               T 1393 I 1533
s Papio_kindae.k141_2214839                                  20751 299 -     27687 A-AAAA----TTA-CTggc-tggg-ca-cggtgtctcatgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaataccgtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactgcatctca----aaag----a---
i Papio_kindae.k141_2214839                              I 1 C 0
s Papio_papio.k141_799093                                    13887 299 +     16796 A-AAAA----TTA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactgcatctca----aaag----a---
i Papio_papio.k141_799093                                I 1 C 0
s Papio_ursinus.k141_2278143                                 20697 299 -     23640 A-AAAA----TTA-CTggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactgcatctca----aaag----a---
i Papio_ursinus.k141_2278143                             I 1 C 0
s Piliocolobus_badius.k141_2704958                             914 302 +     55023 A-AAAA----TTA-CTggc-cggg-ag-cagtgtctcacgcctgtaatt-ccagccctttgggaggccaa-gacaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-ccccgtctct-actaaaaatgc-a--aa-a-aaa-attagccag-gtgtggtgacacacgcct-taa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--gccactgca---ctccagcctgggcga-cagagcgagacgccatctca----aaaaaaaga---
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          465 302 -     89929 A-AAAA----TTA-CTggc-cggg-ag-cagtgtctcacggctgtaatc-ccagccctttgggaggccaa-gacaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-ccccgtctct-actaaaaatgc-a--aa-a-aaa-attagccag-gtgtggtgacacacgcct-taa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--gccactgca---ctccagcctgggcga-cagagcgagacgccatctca----aaaaaaaga---
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1053 302 +     40849 A-AAAA----TTA-CTggc-cggg-ag-cagtgtctcacggctgtaatc-ccagccctttgggaggccaa-gacaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-ccccgtctct-actaaaaatgc-a--aa-a-aaa-attagccag-gtgtggtgacacacgcct-taa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--gccactgca---ctccagcctgggcga-cagagcgagacgccatctca----aaaaaaaga---
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  252720 302 +  14605196 a-a----aaatta-ctggc-cGGG-AG-CAGTgtctcacggctgtaatc-ccagccctttgggaggccaa-gacaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-ccccgtctct-actaaaaatgc-a--aa-a-aaa-attagccag-gtgtggtgacacacgcct-taa--tcccagctacacaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--gccactgca---ctccagcctgggcga-cagagcgagacgccatctca----aaaaaaaga---
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                   176426 298 - 189387572 a-a----aaatta-ctggc-tggg-cg-cagtggcttacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggaccatcaggtcaggagttcaagaccagt-ctgaccaacatggtgaaa-ccctgtctct-actaaaaatac-a--aa-a-a-a-attagccga-gcatggtggcggccgcctataa--tcccagctacccaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgacattgt--gccactgta---ctccagcctgggtga-cagagagagactccatatca----aaaa----a---
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191244 298 -   9816681 A-GAAA----TTA-CTggc-tggg-cg-cagtggcttacgcctgtaatc-ccagccctttgggaggctga-ggcaggtggaccatcaggtcaggagttcaagaccagt-ctgaccaacatggtgaaa-acctgtctct-actaaaaatac-a--aa-a-a-a-attagccga-gcatggtggcggccgcctataa--tcccagctacccaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgacattgt--gccactgta---ctccagcctgggtga-cagagagagactccatatca----aaaa----a---
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26050 303 +     69807 A-AAA-----TTA-CTggc-cggg-cg-cggtgtctcactcctgtaatc-ccaggcctttgggaggccga-ggcaggtggatcacgaggtcaggagatggagaccatc-ctggctaacacggtgaaa-ccccgtctct-actaaaaatac-aaaaa-a-aaa-attagccaa-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagtgagactccatctca----aaaaaaaga---
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43245 302 -     80239 A-AAA-----TTA-CTggc-cggg-cg-cag-gtctcacgcctgtaatc-ccaggcctttgggaggccga-ggcaggtggatcacgaggtcaggagatggagaccatc-ctggctaacacggtgaaa-ccccgtctct-actaaaaatac-aaaaa-a-aaa-attagccaa-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--gccactgca---ctccagcctgggcga-cagagcgagactccatctca----aaaaaaaga---
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25425 302 +     91421 A-AAAA----TTA-CTggc-cgga-tg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacacct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agagcttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  151918 302 -   7812017 A-AAAA----TGA-CTggc-cgga-tg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacacct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agagcttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcgagactccatctca----aaaaaaaga---
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6295 302 +     72585 A-AAAA----TGA-CTggc-cgga-tg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacacct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agagcttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcgagactccatctca----aaaaaaaga---
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                                1 295 +      7119 --------------CTggc-caga-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-aaaaattagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagtgagactccatctca----aaaaaaaga---
i Rhinopithecus_bieti.k119_778604                        N 0 I 5
s Rhinopithecus_roxellana.NC_044550.1                    104120602 303 + 195417433 a-a----aaatta-ctggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-aaaaattagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--gccactgca---ctccagcctgggcga-cagagcgagactccatctca----aaaaaaaga---
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 1
s Rhinopithecus_strykeri.ctg102                             234843 303 -   7961872 A-AAAA----TTA-CTggc-caga-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatctcgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-aaaaattagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagtgagactccatctca----aaaaaaaga---
i Rhinopithecus_strykeri.ctg102                          C 0 I 1
s Semnopithecus_entellus.k141_158471                         23746 293 +     27374 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggtga-cagagcaagactccatctca----aaaaaaaga---
i Semnopithecus_entellus.k141_158471                     I 4 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27265 293 +     58920 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgagatcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagctga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Semnopithecus_hypoleucos.k141_1910531                  I 4 I 4
s Semnopithecus_johnii.k141_843753                           13761 292 -     45317 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aa-ccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Semnopithecus_johnii.k141_843753                       I 4 C 0
s Semnopithecus_priam.k141_714795                            21419 293 -     42441 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--accactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Semnopithecus_priam.k141_714795                        I 4 C 0
s Semnopithecus_schistaceus.k141_1432920                     24099 293 -     29113 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgt--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Semnopithecus_schistaceus.k141_1432920                 I 4 C 0
s Semnopithecus_vetulus.k141_244474                          27168 293 -     48123 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagattgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--accactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Semnopithecus_vetulus.k141_244474                      I 4 C 0
s Symphalangus_syndactylus.tarseq_199                       389667 298 +   1523678 A-AAAA----TTA-CTggc-gggg-cg-ctgtggctcctgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcatcaggtcaggagttcaagaccagt-ctgaccaacatggtgaaa-ccccgtctct-actaaaaatac-a--aa-a-a-a-attagccgg-gcatggtggcgggtgcctgtaa--tcccagctactcaggaggctgacgcaggagaatcacttg-aacccgggaggc-agaagttg-cag-tgagccaacattga--gcctctgta---ctccagcctgggcga-cagagcgagactccatctca----aaaa----a---
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                           351618 299 - 186847797 a-a----aaatta-ctggc-tggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcactaggtcaggagatggagaccatc-ctggctaatacggtgaaa-ccccatctct-actaaaaatac-a--aa-a-aaa-attagccgg-gtatggtgacacatgcctgtaa--tcccagctactcaggaggctgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-tgagccgagattgc--accactgca---ctccagcctgggcga-cagagtgagactccatctca----aaag----a---
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Trachypithecus_auratus.k141_1189070                        19310 293 +     26378 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Trachypithecus_auratus.k141_1189070                    I 4 C 0
s Trachypithecus_crepusculus.k141_539312                     31974 293 -     78344 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Trachypithecus_crepusculus.k141_539312                 I 4 C 0
s Trachypithecus_cristatus.k141_180416                       18631 293 +     25722 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Trachypithecus_cristatus.k141_180416                   I 4 C 0
s Trachypithecus_francoisi.k141_1453105                      26925 293 -     62838 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcatgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Trachypithecus_francoisi.k141_1453105                  I 4 C 0
s Trachypithecus_geei.k141_1001272                           26973 293 +     46913 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccaa-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Trachypithecus_geei.k141_1001272                       I 4 C 0
s Trachypithecus_germaini.k141_57262                          7779 293 -     28527 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Trachypithecus_germaini.k141_57262                     I 4 C 0
s Trachypithecus_hatinhensis.k141_31479                      28864 293 -     64340 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacatgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Trachypithecus_hatinhensis.k141_31479                  I 4 C 0
s Trachypithecus_laotum.k141_928651                          26901 293 -     63452 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacatgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Trachypithecus_laotum.k141_928651                      I 4 C 0
s Trachypithecus_leucocephalus.k141_96450                     8344 293 +     22490 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcatgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Trachypithecus_leucocephalus.k141_96450                I 4 C 0
s Trachypithecus_melamera.k141_591572                         1772 293 -      6147 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Trachypithecus_melamera.k141_591572                    I 4 C 0
s Trachypithecus_obscurus.k141_848057                         8677 293 -     13050 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Trachypithecus_obscurus.k141_848057                    I 4 C 0
s Trachypithecus_phayrei.ctg124                             253916 293 -   6242583 ---------------Tggc-cggg-cg-cggtgtctcacgcctgtaatc-ccagccctttgggaggccga-ggcaggtggatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Trachypithecus_phayrei.ctg124                          I 4 C 0
s Trachypithecus_pileatus.k141_2622778                           1 234 +     19340 -------------------------------------------------------------------------------gatcacgaggtcaggagatcgagaccatc-ctggctaacacggtgaaa-cctcgtctct-actaaaaatac-a--aa-a-aaa-attagccga-gtgtggtgacacacgcct-taa--tcccagctactcaggagactgaggcaggagaatcacttg-aacccaggaggc-agaggttg-cag-taagccgagattgc--gccactgca---ctccagcctgggcga-cagagcaagactccatctca----aaaaaaaga---
i Trachypithecus_pileatus.k141_2622778                   N 0 C 0
e Nannospalax_galili.KL204047.1                             944807   0 +   3037898 C
e Saimiri_ustus.k141_360372                                  29020   0 -     47109 C
e Saimiri_sciureus.k141_1467173                              13875   0 -     22428 C
e Saimiri_oerstedii.k141_245838                              26469   0 -     34454 C
e Saimiri_macrodon.k141_1173117                              29777   0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       29388   0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1107826   0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            26391   0 +     75252 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23034   0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     30674   0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_89005         428   0 +      9367 C
e Octodon_degus.JH651603.1                                11046239   0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70091   0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1925801   0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                  8665   0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   4023   0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18949076   0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    97206   0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   2629   0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                   3718   0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       61251   0 -     66877 C
e Cavia_porcellus.DS562891.1                               4998150   0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4994708   0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    44155   0 +    145209 C
e Echinops_telfairi.JH980293.1                            62853060   0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_171931              12395   0 -     14239 C
e Elephantulus_edwardii.JH947257.1                         9107088   0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11863438   3 -  20541912 I
e Callibella_humilis.k141_1233062                             8958   0 +     18648 C
e Perodicticus_potto.k141_1854441                            17070   0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          24706   0 +     31479 C
e Otolemur_garnettii.GL873799.1                             351423   0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        38420   0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563262   0 - 199412804 C
e Nycticebus_coucang.k141_3846325                             1781   0 -      3937 C
e Nycticebus_bengalensis.LG01                             93635023   0 + 196305487 C
e Loris_tardigradus.ctg83                                  5042686   0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            9025   0 +     19643 C
e Galagoides_demidoff.k141_561628                            18863   0 -     32986 C
e Galago_senegalensis.k141_991736                             6812   0 +     22493 C
e Galago_moholi.ctg3793                                     123267   0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       18647   1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            602192   4 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                 10616   4 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   18599   4 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2108906   4 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            11564   3 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     16602   0 +     24238 C
e Carollia_perspicillata.CarPer_scaffold_170178               3989   3 +      5315 I
e Tupaia_tana.TupTan_flattened_line_394                       6947   0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832631   0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         27664   0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                103764   0 -    112863 C
e Ursus_maritimus.KK499267.1                                180625   0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              5240   0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3473   0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        38042   0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1450466   0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                197000   0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11467869   0 -  31847680 C
e Mustela_putorius.JH418006.1                             14353906   0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         7273   0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             24759   0 -     74585 C
e Lycaon_pictus.CM007581.1                                41613403   0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        812266   0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24914871   0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45105829   0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41614248   0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          221113   0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     7770   0 -     23171 C
e CanFam4.chr16                                           42504134   0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  3700   3 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            214217   0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20414119   0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_230229                      2148  22 +      2695 I
e Xerus_inauris.XerIna_scaffold_2302                        172870   6 -    224448 I
e Vicugna_pacos.KN270157.1                                   75120   0 +   5488506 C
e Varecia_variegata.k141_289850                              22924   0 -    147434 C
e Varecia_rubra.k141_787544                                  24017   0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_46687                     981   0 -     21056 C
e Tursiops_truncatus.MRVK01000835.1                       17360041   0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6479212   0 -  10818551 C
e Tragulus_javanicus.TraJav_scaffold_3462                   172111   0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    478445   3 -    610378 I
e Tarsius_wallacei.k141_226975                                5724   0 +     20590 C
e Tarsius_lariang.k141_1780720                                5673   0 +      6850 C
e Tapirus_terrestris.TapTer_scaffold_755                    104329   0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      190378   0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                1465   4 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                12402   0 +     22964 C
e Sus_scrofa.CM000828.4                                    6639909   0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             123687   0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1867092   6 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1857099   5 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    47779   3 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    114782   0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           6679   0 +     21866 C
e Sapajus_apella.ctg103                                     237089   0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6494   0 +     16473 C
e Saguinus_oedipus.k141_1466288                               3422   0 -      4301 C
e Saguinus_mystax.k141_8077960                                2680   0 +      5979 C
e Saguinus_midas.LG03                                       390488   0 - 209938924 C
e Saguinus_labiatus.k141_2380921                              1055   0 -      4390 C
e Saguinus_inustus.k141_2469308                               2730   0 +      5932 C
e Saguinus_imperator.k141_1898058                             2790   0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             2699   0 +      6077 C
e Saguinus_bicolor.k141_1429097                               2804   0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73598   0 -    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                       2913563   0 +   3329780 C
e Rattus_norvegicus.chr16                                 37021347   2 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51841   0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18097853   0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3536185   0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5839676   0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            50421   3 -     66298 I
e Psammomys_obesus.NESX01036366.1                            35449   0 +     52041 C
e Propithecus_verreauxi.k141_1047036                          7041   0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       93404   0 -     98465 C
e Propithecus_perrieri.k141_1496898                          33133   0 +     46564 C
e Propithecus_edwardsi.k141_635656                            6808   0 -     30655 C
e Propithecus_diadema.k141_153680                             3072   0 -     11706 C
e Propithecus_coronatus.k141_209299                           2475   0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1564839   0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1981373   0 +   4620579 C
e Plecturocebus_moloch.k141_1031110                          42826   0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          41358   0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      13442   0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          6506   0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          41461   0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          6509   0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     41810   0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       41417   0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          2013   0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        6928   0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3244   0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           30524   0 +     51125 C
e Pithecia_pithecia.tarseq_165                              555507   0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           30540   0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         30777   0 +     63561 C
e Pithecia_hirsuta.k141_640380                               30501   0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          4760   0 -     25401 C
e Pithecia_albicans.k141_1239476                             63666   0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             1594   0 +     22231 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11160   0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         245563   3 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13852   0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614344   0 +   2937107 C
e Panthera_tigris.KE722367.1                               3971259   0 +   8748460 C
e Panthera_pardus.KV860321.1                              18460539   0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   23213   0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3420   0 +     17875 C
e Ovis_aries.CM001607.2                                   26402901   0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107102435   0 - 174332312 C
e Orcinus_orca.KB316932.1                                  8095302   0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    2338   3 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    91479   3 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          12912   0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         434920   0 -    630418 C
e Ochotona_princeps.JH802162.1                             2549963   0 -   3988456 C
e Noctilio_leporinus.NocLep_scaffold_7894                   126324   6 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226032   0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118349   4 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                          473   0 +     18357 C
e Myotis_lucifugus.GL429869.1                               381645   0 +   4330536 C
e Myotis_davidii.KB100139.1                                4385824   0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9791463   0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             81526   4 -     86153 I
e Mus_spretus.CM004101.1                                  39495422   2 + 130317789 I
e Mus_pahari.LT608297.1                                   58215989   3 +  89631738 I
e Mus_musculus.chr8                                       41686102   2 + 129401213 I
e Mus_caroli.LT608237.1                                   35591743   2 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          37414   0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   17280   0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  23077   0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 177539   3 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351863   0 +    437263 C
e Mirza_zaza.k141_766280                                     51148   0 -     62432 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             40378   0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6361477   0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15961120   3 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                183379   3 +    200668 I
e Microcebus_murinus.CM007674.1                           74983359   0 +  93316391 C
e Mico_schneideri.k141_1877700                                     17884   0 -     26561 C
e Mico_humeralifer.k141_1180625                               9570   0 -     12984 C
e Mico_argentatus.k141_582562                                 9068   0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     79973   0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17427984   3 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 47876   0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       149145   0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7499734   6 +  40650429 I
e Manis_pentadactyla.KN006162.1                             219592   0 +    317179 C
e Manis_javanica.JSZB01003497.1                             672305   0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                221989   0 -    270270 C
e Loxodonta_africana.GL010049.1                           39079764   0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333429   0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       7753   0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          7755   0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              7743   0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          7747   0 +     29618 C
e Leontopithecus_rosalia.k141_349454                         10275   0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     8894   0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        2527   0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           2697   0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        2942   0 -     13097 C
e Lemur_catta.scaffold_24                                 14758218   0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    60936   0 -     65777 C
e Lagothrix_lagothricha.k141_246028                          42028   0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64393   0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1237901   0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                1907   0 -     16823 C
e Indri_indri.k141_2415743                                    1078   0 +     11955 C
e Ictidomys_tridecemlineatus.JH393364.1                     385513   6 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  68221   0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_23202               49547   0 +     49977 C
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6384   0 -     36432 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7781   0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                29527   0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         15569   0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          8569   0 -     42923 C
e Hapalemur_griseus.k141_763500                              59696   0 -     66874 C
e Hapalemur_gilberti.k141_646465                             34827   0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          13426   1 -     40692 I
e Graphiurus_murinus.GraMur_scaffold_10447                     438   0 -     78134 C
e Glis_glis.GliGli_scaffold_33859                            32940   6 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90028   0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               17816   0 +     18121 C
e Felis_nigripes.FelNig_flattened_line_31944                 26392   0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185115290   0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              57742   0 -    111500 C
e Eulemur_rufus.k141_514691                                  41338   0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            3617   0 +     30972 C
e Eulemur_mongoz.k141_232305                                 46891   0 -     97555 C
e Eulemur_macaco.k141_1562045                                22698   0 -     75513 C
e Eulemur_fulvus.k141_636316                                 52065   0 -     65740 C
e Eulemur_flavifrons.k141_433119                             41743   0 +     68309 C
e Eulemur_coronatus.k141_384460                              85170   0 +    112731 C
e Eulemur_collaris.k141_601111                               41208   0 -     70999 C
e Eulemur_albifrons.k141_51491                               13499   0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             3887   0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63670   0 -    133382 C
e Equus_przewalskii.KK951119.1                              410751   0 -    498745 C
e Equus_caballus.CM000403.2                               21373965   0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041   0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12577067   0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           11683   3 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          29708   3 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238349   0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               5026   0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  138002   0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  663216   0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624120   0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        291327   0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    643518   0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              3045   0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213113434   3 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 40979   0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          1563   0 -      8242 C
e Condylura_cristata.JH655891.1                           35805992   0 +  53390261 C
e Chiropotes_sagulatus.k141_1113111                           6879   0 +     34062 C
e Chiropotes_israelita.k141_313004                           41307   0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           2806   0 +      5346 C
e Cheracebus_torquatus.k141_890198                           18221   0 +     39636 C
e Cheracebus_regulus.k141_471822                             18428   0 +    216457 C
e Cheracebus_lugens.k141_1179667                             18173   0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             7760   0 -     32913 C
e Cheirogaleus_medius.k141_759766                             3890   0 -     15404 C
e Cheirogaleus_major.k141_666340                             29373   0 -     33796 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17758   0 +     27315 C
e Cephalopachus_bancanus.k141_1689090                          970   0 -      5494 C
e Cebus_unicolor.k141_1654760                                65854   0 -     89041 C
e Cebus_olivaceus.k141_1404781                                6759   0 -     34880 C
e Cebus_albifrons.Contig27                                  369870   0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               41932   0 +     53515 C
e Cebuella_niveiventris.k141_592277                           3877   0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75448   0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Carlito_syrichta.NW_007259797.1                           269047   0 +    496798 C
e Capra_hircus.CM004588.1                                 26589947   0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407674   0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207728   0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664068   0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629782   0 +  17673402 C
e Callithrix_kuhlii.k119_102356                                480   0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165452957   0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                             564   0 -      8861 C
e Callimico_goeldii.k141_1609886                              8496   0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         19412   0 +    119600 C
e Cacajao_hosomi.k141_81245                                  19499   0 +     95584 C
e Cacajao_calvus.k141_89051                                  41973   0 -     91139 C
e Cacajao_ayresi.k141_96119                                   6679   0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528609   0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543585   0 -  45695690 C
e Bos_mutus.JH880303.1                                      753446   0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354878   0 +  48749331 C
e Bison_bison.KN261452.1                                     20491   0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     84958   0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         3000   0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955791   0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               4961   0 -     19611 C
e Avahi_laniger.k141_2756659                                  4955   0 +     11645 C
e Ateles_paniscus.k141_866194                                21773   0 -     33135 C
e Ateles_marginatus.k141_970259                              47713   0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              32343   0 +     44353 C
e Ateles_chamek.k141_615173                                   4789   0 -     28759 C
e Ateles_belzebuth.k141_1572163                               9652   0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               273486   0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      14763   6 -     32367 I
e Aotus_vociferans.k141_944972                                8020   0 +      8415 C
e Aotus_trivirgatus.k141_192090                              22884   0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                671242   0 +   5030052 C
e Aotus_griseimembra.k141_982342                             43229   0 +     43593 C
e Aotus_azarae.k141_118258                                   49475   0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49062   0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      175407   3 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1583963   0 +   2318259 C
e Alouatta_seniculus.k141_928287                             31686   0 +     42133 C
e Alouatta_puruensis.k141_251022                              7547   0 +     30854 C
e Alouatta_palliata.k141_638677                              45422   0 +     70886 C
e Alouatta_nigerrima.k141_376068                             39724   0 +     45454 C
e Alouatta_macconnelli.k141_361275                           22741   0 -     24835 C
e Alouatta_juara.k141_1687208                                41094   0 -     64179 C
e Alouatta_discolor.k141_2561099                             42653   0 +     55831 C
e Alouatta_caraya.k141_1109140                               43207   0 -     78289 C
e Alouatta_belzebul.k141_1011583                             70974   0 -     84148 C
e Allactaga_bullata.AllBul_scaffold_20030                    16717   0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     18758   0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           811592   0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4247 13 +     36723 aaa-a---a--a----------a----------------------------a--------agt-------ac
s Acinonyx_jubatus.LLWD01001279.1                           811592 12 +   1699592 --G-G---A--A----------G----------------------------A--------AGT--T----AC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 5
s Acomys_cahirinus.AcoCah_scaffold_21377                     18758  5 +     63021 --A-A---G--A----------A-------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414119 12 +  29979442 --g-g---a--a----------a----------------------------a--------att------tac
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 5
s Ailurus_fulgens.LNAC01001112.1                            214217 12 +    347723 --G-G---A--A----------A----------------------------A--------ATT----G--AC
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 5
s Allactaga_bullata.AllBul_scaffold_20030                    16717 17 -     61208 --A-G---A--A----------A--------G----------G-----G--C--------AAA----GTTAT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 5
s Allenopithecus_nigroviridis.k141_3755588                   46570 13 +     53615 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42515 13 +     44087 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15156  9 -     21945 --------a--a----------a----------------------------a--------aGT-------AC
i Allochrocebus_preussi.k141_1993939                     I 3 C 0
s Allochrocebus_solatus.k141_3554717                         16825 13 +     32033 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70974 10 -     84148 ----A---A--A----------G----------------------------A--------ATC-------AC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43207 10 -     78289 ----A---A--A----------G----------------------------A--------ATC-------AC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42653 10 +     55831 ----A---A--A----------G----------------------------A--------ATC-------AC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41094 10 -     64179 ----A---A--A----------G----------------------------A--------ATC-------AC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22741 10 -     24835 ----A---A--A----------G----------------------------A--------ATC-------AC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39724 10 +     45454 ----A---A--A----------G----------------------------A--------ATC-------AC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45422 10 +     70886 ----A---A--A----------G----------------------------A--------ATC-------AC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7547 10 +     30854 ----A---A--A----------G----------------------------A--------ATC-------AC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31686 10 +     42133 ----A---A--A----------G----------------------------A--------ATC-------AC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583963  9 +   2318259 --G-G---A--G----------A----------------------------A--------AAT---------
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 3
s Anoura_caudifer.AnoCau_scaffold_1412                      175410  9 -    412891 -----------a----------a----------------------------a--------aat------tac
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 I 5
s Antilocapra_americana.AntAmePen_scaffold_21030             49062  9 -     68529 --G-G---A--G----------A----------------------------A--------AAT---------
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 4
s Aotus_azarae.k141_118258                                   49475 11 -     65372 --G-A---A--A----------G----------------------------A--------AGT-------AC
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43229 11 +     43593 --G-A---A--A----------G----------------------------A--------AGT-------AC
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671242 11 +   5030052 --G-A---A--A----------G----------------------------A--------AGT-------AC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22884 11 -     23494 --G-A---A--A----------G----------------------------A--------AGT-------AC
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                8020 11 +      8415 --G-A---A--A----------G----------------------------A--------AGT-------AC
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14769  6 -     32367 ------------------------------------------------------------AAT--T----AT
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 6 I 5
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3703  9 -     15198 -----------C----------A----------------------------A--------AAT--T----AC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 3 I 5
s Ateles_geoffroyi_b.tarseq_1536                               273486 10 +  21539123 ----A---A--A----------G----------------------------A--------ATT-------AC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9652 10 +     48076 ----A---A--A----------G----------------------------A--------ATT-------AC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4789 10 -     28759 ----A---A--A----------G----------------------------A--------ATT-------AC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32343 10 +     44353 ----A---A--A----------G----------------------------A--------ATT-------AC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47713 10 -     71267 ----A---A--A----------G----------------------------A--------ATT-------AC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21773 10 -     33135 ----A---A--A----------G----------------------------A--------ATT-------AC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4955 11 +     11645 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Avahi_laniger.k141_2756659                             C 0 I 5
s Avahi_peyrierasi.k141_1823318                               4961 11 -     19611 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Avahi_peyrierasi.k141_1823318                          C 0 I 5
s Balaenoptera_acutorostrata.KI537508.1                    7955791  9 -  23207421 --G-G---A--G----------A----------------------------A--------AAT---------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 4
s Balaenoptera_bonaerensis.DF507193.1                         3000  9 -      4711 --G-G---A--G----------A----------------------------A--------AAT---------
i Balaenoptera_bonaerensis.DF507193.1                    C 0 I 4
s Beatragus_hunteri.BeaHun_scaffold_7278                     84958  9 +    124022 --G-G---A--G----------A----------------------------A--------AAT---------
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 4
s Bison_bison.KN261452.1                                     20491  9 +    288883 --G-G---A--G----------A----------------------------A--------AAT---------
i Bison_bison.KN261452.1                                 C 0 I 4
s Bos_indicus.CM003047.1                                  20354878  9 +  48749331 --G-G---A--G----------A----------------------------A--------AAT---------
i Bos_indicus.CM003047.1                                 C 0 I 4
s Bos_mutus.JH880303.1                                      753446  9 +   1948126 --G-G---A--G----------A----------------------------A--------AAT---------
i Bos_mutus.JH880303.1                                   C 0 I 4
s Bos_taurus.CM000203.6                                   27543585  9 -  45695690 --G-G---A--G----------A----------------------------A--------AAT---------
i Bos_taurus.CM000203.6                                  C 0 I 4
s Bubalus_bubalis.KI419123.1                               1528609  9 -   4408762 --G-G---A--G----------A----------------------------A--------AAT---------
i Bubalus_bubalis.KI419123.1                             C 0 I 4
s Cacajao_ayresi.k141_96119                                   6679 11 +     28062 --G-A---A--A----------G----------------------------A--------ATC-------AC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41973 11 -     91139 --G-A---A--A----------G----------------------------A--------ATC-------AC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19499 11 +     95584 --G-A---A--A----------G----------------------------A--------ATC-------AC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19412 11 +    119600 --G-A---A--A----------G----------------------------A--------ATC-------AC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8958 11 +     18648 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8496 11 -     13885 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             564 11 -      8861 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452957 11 + 189096842 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                480 11 +      8664 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629782 12 +  17673402 --G-G---A--A----------A----------------------------A--------ATT--T----AC
i Camelus_bactrianus.KN276810.1                          C 0 I 5
s Camelus_dromedarius.KN272107.1                           4664068 12 +   7040546 --G-G---A--A----------A----------------------------A--------ATT--T----AC
i Camelus_dromedarius.KN272107.1                         C 0 I 5
s Camelus_ferus.KB017975.1                                 1207728 12 +   1652518 --G-G---A--A----------A----------------------------A--------ATT--T----AC
i Camelus_ferus.KB017975.1                               C 0 I 5
s CanFam4.chr16                                           42504134 12 +  60362399 --G-G---A--A----------A----------------------------A--------ATC--T----AC
i CanFam4.chr16                                          C 0 I 5
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7770 12 -     23171 --G-G---A--A----------A----------------------------A--------ATC--T----AC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 5
s Canis_lupus_dingo.QKWQ01000480.1                          221113 12 +   9314153 --G-G---A--A----------A----------------------------A--------ATC--T----AC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 5
s Canis_lupus_familiaris.chr16                            41614248 12 +  59632846 --G-G---A--A----------A----------------------------A--------ATC--T----AC
i Canis_lupus_familiaris.chr16                           C 0 I 5
s Canis_lupus_orion.HG994398.1                            45105829 12 -  63665305 --G-G---A--A----------A----------------------------A--------ATC--T----AC
i Canis_lupus_orion.HG994398.1                           C 0 I 5
s Capra_aegagrus.CM003241.1                               27407674  9 -  46296322 --G-G---A--G----------A----------------------------A--------AAT---------
i Capra_aegagrus.CM003241.1                              C 0 I 4
s Capra_hircus.CM004588.1                                 26589947  9 +  44709034 --G-G---A--G----------A----------------------------A--------AAT---------
i Capra_hircus.CM004588.1                                C 0 I 4
s Carlito_syrichta.NW_007259797.1                           269047 11 +    496798 --a-a---a--a----------a----------------------------a--------atc-------ac
i Carlito_syrichta.NW_007259797.1                        C 0 I 5
s Carollia_perspicillata.CarPer_scaffold_170178               3992  9 +      5315 -----------A----------A----------------------------A--------AAT--T----AC
i Carollia_perspicillata.CarPer_scaffold_170178          I 3 I 5
s Catagonus_wagneri.CatWag_scaffold_2839                     75448 12 -    217609 --G-G---A--G----------A----------------------------A--------AAT--T----AT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 5
s Cavia_aperea.AVPZ01000300.1                              4994708 16 +  23392119 --g-g---g--a--------aaa------------------------aaaaa--------g--------gat
i Cavia_aperea.AVPZ01000300.1                            C 0 I 5
s Cavia_porcellus.DS562891.1                               4998150 16 +  23407841 --g-g---a--a--------aca------------------------aaaaa--------g--------gat
i Cavia_porcellus.DS562891.1                             C 0 I 5
s Cavia_tschudii.CavTsc_scaffold_23560                       61251 16 -     66877 --G-G---A--AA--------CA-----A-----AA-A-------------A--------G------G--AT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 5
s Cebuella_niveiventris.k141_592277                           3877 11 -     12580 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41932 11 +     53515 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369870 11 -  26074798 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6759 11 -     34880 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65854 11 -     89041 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          970 19 -      5494 --A-A---A--A----------A----------------------------AAAAAAAAAATC-------AC
i Cephalopachus_bancanus.k141_1689090                    C 0 I 5
s Ceratotherium_simum.JH767749.1                          15490925 12 -  27778364 --G-G---A--A----------A----------------------------A--------ACA--T----AC
i Ceratotherium_simum.JH767749.1                         C 0 I 5
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17758 12 +     27315 --G-G---A--A----------A----------------------------A--------ACA--T----AC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 5
s Cercocebus_atys.KQ010504.1                                139746 13 -   4669795 aaa-a---a--t----------a----------------------------a--------agt-------ac
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43486 14 +     47900 aaa-a--aa--a----------a----------------------------a--------aGT-------AC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43319 13 -     44860 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43302 13 -    148725 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25529  9 -     40656 --------A--A----------A----------------------------A--------AGT-------AC
i Cercopithecus_ascanius.k141_3120866                    I 4 C 0
s Cercopithecus_cephus.k141_4183004                           5498  9 +     20796 --------A--A----------C----------------------------A--------AGT-------AC
i Cercopithecus_cephus.k141_4183004                      I 4 C 0
s Cercopithecus_diana.k141_132293                            10564 13 -     17524 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26285 13 -     34525 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10118 10 -     25376 --------A--A----------A----------------------------AA-------AGT-------AC
i Cercopithecus_lowei.k141_2101310                       I 3 C 0
s Cercopithecus_albogularis.ctg5                                  362713  9 -  39242232 --------A--A----------A----------------------------A--------AGT-------AC
i Cercopithecus_albogularis.ctg5                               I 3 C 0
s Cercopithecus_mona.ctg39                                  268425 10 +  21565898 --------A--A----------A----------------------------AA-------AGT-------AC
i Cercopithecus_mona.ctg39                               I 3 C 0
s Cercopithecus_neglectus.k141_858615                        30765  9 -     45857 --------a--a----------a----------------------------a--------aGT-------AC
i Cercopithecus_neglectus.k141_858615                    I 3 C 0
s Cercopithecus_nictitans.k141_2995370                       25702  9 -     32606 --------A--A----------A----------------------------A--------AGT-------AC
i Cercopithecus_nictitans.k141_2995370                   I 3 C 0
s Cercopithecus_petaurista.k141_42573                         1859  9 +      8499 --------A--A----------A----------------------------A--------AGT-------AC
i Cercopithecus_petaurista.k141_42573                    I 3 C 0
s Cercopithecus_pogonias.k141_6079                           24259 10 +     70610 --------a--a----------a----------------------------a-------aaGT-------AC
i Cercopithecus_pogonias.k141_6079                       I 4 C 0
s Cercopithecus_roloway.k141_3012935                         21179 13 +     36323 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11567  7 -     19938 ---------------------------------------------------A--------TCT----G--AC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 3 I 5
s Cheirogaleus_major.k141_666340                             29373 11 -     33796 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Cheirogaleus_major.k141_666340                         C 0 I 5
s Cheirogaleus_medius.k141_759766                             3890 11 -     15404 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Cheirogaleus_medius.k141_759766                        C 0 I 5
s Cheracebus_lucifer.k141_2312002                             7760 11 -     32913 --A-A---A--A----------G----------------------------A--------AAG-------AC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18173 11 -     40346 --A-A---A--A----------G----------------------------A--------AAG-------AC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18428 11 +    216457 --A-A---A--A----------G----------------------------A--------AAG-------AC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18221 11 +     39636 --A-A---A--A----------G----------------------------A--------AAG-------AC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2806 11 +      5346 --G-A---A--A----------T----------------------------A--------ATT-------AC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41307 11 -    112038 --G-A---A--A----------G----------------------------A--------ATC-------AC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6879 11 +     34062 --G-A---A--A----------G----------------------------A--------ATC-------AC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342074 13 +  18827391 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8620 13 -     44032 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303399 13 - 135778131 aaa-a---a--a----------a----------------------------a--------agt-------ac
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10620  7 +     15858 ---------------------------------------------------A--------ACT----G--AC
i Choloepus_didactylus.ChoDid_scaffold_70559             I 4 I 5
s Choloepus_hoffmanni.KN194906.1                            602196  7 -    839153 ---------------------------------------------------A--------ACT----G--AC
i Choloepus_hoffmanni.KN194906.1                         I 4 I 5
s Colobus_angolensis.KN981557.1                             407849  9 -   2368649 --------a--a----------a----------------------------a--------agt-------ac
i Colobus_angolensis.KN981557.1                          I 4 C 0
s Colobus_guereza.LG01                                      377726  9 - 200372422 --------a--a----------a----------------------------a--------aGT-------AC
i Colobus_guereza.LG01                                   I 4 C 0
s Colobus_polykomos.k141_906115                               1273  9 -     84244 --------a--a----------a----------------------------a--------aGT-------AC
i Colobus_polykomos.k141_906115                          I 4 C 0
s Condylura_cristata.JH655891.1                           35805992 11 +  53390261 --g-g---a--a----------a----------------------------a---------gt------tac
i Condylura_cristata.JH655891.1                          C 0 I 5
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1563 12 -      8242 --G-G---A--A----------A----------------------------A--------AAT--T----AC
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 5
s Cricetomys_gambianus.CriGam_scaffold_14425                 40979 18 -     83289 --A-A---A--A----------A--------G----------G-----G--A--------AAA-GTT-T-AT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 5
s Cricetulus_griseus.LT883664.1                          213113437  9 - 224834208 ---------------------------------------------------a---------aa---gtttat
i Cricetulus_griseus.LT883664.1                          I 3 I 5
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3045 12 +     87169 --G-G---A--A----------G----------------------------A--------AGT--T----AC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 5
s Ctenodactylus_gundi.CteGun_scaffold_65                    643518 17 -   1526836 --A-G---ATTA----------TC----A--G-------------------G--------AAA----G--GT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 5
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3718  9 +     50838 --G-G---A--A----------A-----A-----AA---------------A--------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 21
s Cuniculus_paca.CunPac_flattened_line_7025                   2629 13 +     36344 --G-A---A--A----------A-----A-----AA---------------A--------G----T----AT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 5
s Dasyprocta_punctata.DasPun_flattened_line_15900            26391 21 +     75252 --G-G---A--AAAAG-AGAA-A-----A-----AA---------------A--------G----T----AT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 5
s Dasypus_novemcinctus.JH564415.1                          2108910  7 -   2246927 ---------------------------------------------------A--------TCT----G--GC
i Dasypus_novemcinctus.JH564415.1                        I 4 I 5
s Daubentonia_madagascariensis.ctg71                        291327 11 +  12879189 --G-A---A--A----------A----------------------------A--------GTG-------AC
i Daubentonia_madagascariensis.ctg71                     C 0 I 5
s Delphinapterus_leucas.KZ290073.1                        18624120  9 -  35494412 --g-g---a--g----------a----------------------------a--------gat---------
i Delphinapterus_leucas.KZ290073.1                       C 0 I 4
s Desmodus_rotundus.KZ672289.1                            11863441  9 -  20541912 -----------a----------a----------------------------a--------aat------gac
i Desmodus_rotundus.KZ672289.1                           I 3 I 5
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663216 12 -   1390856 --G-G---A--A----------A----------------------------A--------AGA--T----AC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 5
s Diceros_bicornis.DicBicMic_scaffold_5955                  138002 12 -    198055 --G-G---A--A----------A----------------------------A--------ACA--T----AC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 5
s Dinomys_branickii.DinBra_scaffold_10381                    97206  5 -    115145 --G-G---A--A----------A-------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 12
s Dipodomys_ordii.KN672350.1                              18949076 16 -  37912305 --a-a--ga--a----------a-------------------------ataa--------aac------taa
i Dipodomys_ordii.KN672350.1                             C 0 I 5
s Dipodomys_stephensi.DipSte_scaffold_89095                   4023 16 -     10735 --A-AA--A--A----------A-----A-T---A----------------A--------AAC--T----AA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 5
s Dolichotis_patagonum.DolPat_scaffold_80628                  8665 22 +     14636 --G-G---A--AAAAG-AAAA-A-----A-----AA-A-------------A--------G------G--AT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 5
s Echinops_telfairi.JH980293.1                            62853060  9 - 111700974 --G-G---G--A----------T----------------------------A--------AAA---------
i Echinops_telfairi.JH980293.1                           C 0 I 1
s Eidolon_helvum.AWHC01266696.1                               5026 12 +     19438 --G-G---A--A----------A----------------------------A--------ATT--T----GC
i Eidolon_helvum.AWHC01266696.1                          C 0 I 5
s Elaphurus_davidianus.JRFZ01104969.1                       238349  9 -    607251 --G-G---A--G----------A----------------------------A--------AAT---------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 4
s Elephantulus_edwardii.JH947257.1                         9107088 13 -  10337057 --ggg---a--a----------a----------------------------a--------aat------gac
i Elephantulus_edwardii.JH947257.1                       C 0 I 5
s Ellobius_lutescens.LOEQ01008920.1                          29711  9 +    110024 ---------------------------------------------------a---------aa---gtttat
i Ellobius_lutescens.LOEQ01008920.1                      I 3 I 5
s Ellobius_talpinus.LOJH01026522.1                           11686  9 +     18970 ---------------------------------------------------a---------aa---gtttat
i Ellobius_talpinus.LOJH01026522.1                       I 3 I 5
s Enhydra_lutris.KZ291758.1                               24914871 12 +  41312741 --G-G---A--A----------A----------------------------A--------ATT--T----AC
i Enhydra_lutris.KZ291758.1                              C 0 I 5
s Eptesicus_fuscus.JH977646.1                             12577067 12 +  14770903 --g-g---a--a----------a----------------------------a--------aat------tac
i Eptesicus_fuscus.JH977646.1                            C 0 I 5
s Erythrocebus_patas.Contig38                               261599 14 +  21539334 aaa-a--aa--a----------a----------------------------a--------aGT-------AC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63670  9 -    133382 --g-g---a--g----------a----------------------------a--------aat---------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 4
s Eubalaena_japonica.EubJap_flattened_line_118172             3887  9 +      7672 --G-G---A--G----------A----------------------------A--------AAT---------
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 I 4
s Eulemur_albifrons.k141_51491                               13499 11 -     24895 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Eulemur_albifrons.k141_51491                           C 0 I 5
s Eulemur_collaris.k141_601111                               41208 11 -     70999 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Eulemur_collaris.k141_601111                           C 0 I 5
s Eulemur_coronatus.k141_384460                              85170 11 +    112731 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Eulemur_coronatus.k141_384460                          C 0 I 5
s Eulemur_flavifrons.k141_433119                             41743 11 +     68309 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Eulemur_flavifrons.k141_433119                         C 0 I 5
s Eulemur_fulvus.k141_636316                                 52065 11 -     65740 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Eulemur_fulvus.k141_636316                             C 0 I 5
s Eulemur_macaco.k141_1562045                                22698 11 -     75513 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Eulemur_macaco.k141_1562045                            C 0 I 5
s Eulemur_mongoz.k141_232305                                 46891 11 -     97555 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Eulemur_mongoz.k141_232305                             C 0 I 5
s Eulemur_rubriventer.k141_1423786                            3617 11 +     30972 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Eulemur_rubriventer.k141_1423786                       C 0 I 4
s Eulemur_rufus.k141_514691                                  41338 11 -     52037 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Eulemur_rufus.k141_514691                              C 0 I 5
s Eulemur_sanfordi.k141_1122526                              57742 11 -    111500 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Eulemur_sanfordi.k141_1122526                          C 0 I 5
s Felis_catus.CM001381.2                                 186245505 12 - 206538554 --G-G---A--A----------G----------------------------A--------AGT--T----AC
i Felis_catus.CM001381.2                                 C 0 I 5
s Felis_catus_fca126.CM031415.1                          185115290 12 - 205367284 --G-G---A--A----------G----------------------------A--------AGT--T----AC
i Felis_catus_fca126.CM031415.1                          C 0 I 5
s Felis_nigripes.FelNig_flattened_line_31944                 26392 12 -     30238 --G-G---A--A----------G----------------------------A--------AGT--T----AC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 5
s Galago_moholi.ctg3793                                     123267 12 -    137831 --G-G--GA--A----------A----------------------------A--------AAG-------AC
i Galago_moholi.ctg3793                                  C 0 I 5
s Galago_senegalensis.k141_991736                             6812 12 +     22493 --G-G--GA--A----------A----------------------------A--------AAG-------AC
i Galago_senegalensis.k141_991736                        C 0 I 5
s Galagoides_demidoff.k141_561628                            18863 12 -     32986 --G-G--GA--A----------A----------------------------A--------AAG-------AC
i Galagoides_demidoff.k141_561628                        C 0 I 5
s Galeopterus_variegatus.GalVar_scaffold_74466               17816 12 +     18121 --G-A---A--A----------A----------------------------A--------AAT--T----TC
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 5
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90028  9 -     95226 --G-G---A--G----------A----------------------------G--------AAG---------
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 4
s Glis_glis.GliGli_scaffold_33859                            32946  6 -     36801 ------------------------------------------------------------AAT--T----AC
i Glis_glis.GliGli_scaffold_33859                        I 6 I 5
s Gorilla_beringei.k141_3358147                               4564 13 -      8343 caa-a---a--a----------a----------------------------a--------aGT-------AC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 70062  7 +  33314783 ----------------------a----------------------------a--------agt-------ac
i Gorilla_gorilla.LT578336.1                             I 5 I 114
s Graphiurus_murinus.GraMur_scaffold_10447                     438  5 -     78134 --G-A---A--A----------A-------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 12
s Hapalemur_alaotrensis.k141_330369                          13427  9 -     40692 --------A--A----------A----------------------------A--------ATG-------AC
i Hapalemur_alaotrensis.k141_330369                      I 1 I 5
s Hapalemur_gilberti.k141_646465                             34827 11 +     49394 --G-A---A--A----------A----------------------------A--------CTG-------AC
i Hapalemur_gilberti.k141_646465                         C 0 I 5
s Hapalemur_griseus.k141_763500                              59696 11 -     66874 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Hapalemur_griseus.k141_763500                          C 0 I 5
s Hapalemur_meridionalis.k141_258450                          8569 11 -     42923 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Hapalemur_meridionalis.k141_258450                     C 0 I 5
s Hapalemur_occidentalis.k141_578367                         15569 11 -     53142 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Hapalemur_occidentalis.k141_578367                     C 0 I 5
s Helogale_parvula.HelPar_flattened_line_2585                29527 12 -    327341 --G-G---A--G----------G----------------------------A--------AGT--T----AC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 5
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7781  9 +     48891 --G-G---A--G----------A----------------------------A--------AAT---------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 4
s Heterocephalus_glaber.JH602082.1                         1925801 15 -  22651954 --g-g---a--a----------a-------------------------aaaa--------aaa------tat
i Heterocephalus_glaber.JH602082.1                       C 0 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6384  9 -     36432 --G-G---A--G----------A----------------------------A--------AAT---------
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 4
s Hipposideros_galeritus.HipGal_scaffold_23202               49547 12 +     49977 --G-G---A--A----------C----------------------------A--------AAT--T----AC
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 5
s Hoolock_leuconedys.ctg274                                    141586  9 -    630532 --------a--a----------a----------------------------a--------aGT-------AC
i Hoolock_leuconedys.ctg274                                 I 5 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68221 12 +     83186 --G-G---A--G----------G----------------------------A--------AGT--T----AC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 233
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70091 24 +    143317 --G-G---A--AAAAGTAAAAAA-----A-----AA-A-------------A--------G------G--AT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 5
s Hylobates_agilis.k141_1155965                               4616  9 +     12352 --------a--a----------a----------------------------a--------aGT-------AC
i Hylobates_agilis.k141_1155965                          I 2 C 0
s Hylobates_klossii.k141_738755                              11800  9 +     55766 --------a--a----------a----------------------------a--------aGT-------AC
i Hylobates_klossii.k141_738755                          I 3 C 0
s Hylobates_pileatus_b.LG02                                       2051398  9 + 191637585 --------a--a----------a----------------------------a--------aGT-------AC
i Hylobates_pileatus_b.LG02                                     I 3 C 0
s Hylobates_pileatus_a.tarseq_633                            7800276  9 +  11177569 --------a--a----------a----------------------------a--------aGT-------AC
i Hylobates_pileatus_a.tarseq_633                          I 3 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385519  6 +   7955117 ------------------------------------------------------------aat------tat
i Ictidomys_tridecemlineatus.JH393364.1                  I 6 I 5
s Indri_indri.k141_2415743                                    1078 11 +     11955 --G-A---A--C----------A----------------------------A--------ATG-------AC
i Indri_indri.k141_2415743                               C 0 I 5
s Inia_geoffrensis.IniGeo_flattened_line_69447                1907  9 -     16823 --G-G---A--G----------A----------------------------A--------GAT---------
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 4
s Jaculus_jaculus.JH725527.1                               1237901 17 +   9596543 --A-G---A--A----------G-----A--G----------G--------A--------AAA----GTTAT
i Jaculus_jaculus.JH725527.1                             C 0 I 5
s Kogia_breviceps.KogBre_flattened_line_3970                 64393  9 -     97402 --G-G---A--G----------A----------------------------A--------AAT---------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 4
s Lagothrix_lagothricha.k141_246028                          42028 10 +    110728 ----A---A--A----------G----------------------------A--------ATT-------AC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60936 12 -     65777 --G-A---A--A----------A----------------------------A--------AAT--T----AT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 5
s Lemur_catta.scaffold_24                                 14758218 11 +  30322482 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Lemur_catta.scaffold_24                                C 0 I 5
s Leontocebus_fuscicollis.k141_2994775                        2942 11 -     13097 --G-A---A--A----------T----------------------------A--------ATT-------AC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2697 11 +      5940 --G-A---A--A----------T----------------------------A--------ATT-------AC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2527 11 -      5717 --G-A---A--A----------T----------------------------A--------ATT-------AC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8894 11 -     11567 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10275 11 -     12945 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7747 11 +     29618 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Lepilemur_ankaranensis.k141_567626                     C 0 I 5
s Lepilemur_dorsalis.k141_387009                              7743 11 +     31569 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Lepilemur_dorsalis.k141_387009                         C 0 I 5
s Lepilemur_ruficaudatus.k141_330196                          7755 11 +     24756 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 5
s Lepilemur_septentrionalis.k141_360456                       7753 11 +     16388 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Lepilemur_septentrionalis.k141_360456                  C 0 I 5
s Leptonychotes_weddellii.KB714746.1                        812266 12 -   3914936 --g-g---a--a----------g----------------------------a--------att------tac
i Leptonychotes_weddellii.KB714746.1                     C 0 I 5
s Lepus_americanus.LepAme_scaffold_56121                     16602  9 +     24238 -----------A----------A----------------------------T--------AAT--T----GC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 5
s Lipotes_vexillifer.KE559953.1                             333429  7 +    662738 --------A--G----------A----------------------------A--------GGT---------
i Lipotes_vexillifer.KE559953.1                          C 0 I 4
s Lophocebus_aterrimus.ctg367                               331704 13 -   1826925 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9025 11 +     19643 --G-G---G--A----------A----------------------------A--------AAG-------AC
i Loris_lydekkerianus.k141_2031736                       C 0 I 5
s Loris_tardigradus.ctg83                                  5042686 11 -   6120653 --G-G---G--A----------A----------------------------A--------AAG-------AC
i Loris_tardigradus.ctg83                                C 0 I 5
s Loxodonta_africana.GL010049.1                           39079764 12 +  43346337 --g-t---a--a----------a----------------------------a--------aat------tac
i Loxodonta_africana.GL010049.1                          C 0 I 5
s Lycaon_pictus.CM007581.1                                41613403 12 +  59628241 --G-G---A--A----------A----------------------------A--------ATC--T----AC
i Lycaon_pictus.CM007581.1                               C 0 I 5
s Macaca_arctoides.k141_1757516                              44020 14 -     61512 aaa-a--aa--a----------a----------------------------a--------aGT-------AC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371681 13 -  60120075 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23935  7 +     30207 aaa-a---a--a----------a-------------------------------------------------
i Macaca_cyclopis.k119_263443                            C 0 I 5
s Macaca_fascicularis.k141_1397292                           21038 12 -     24934 -aa-a---a--a----------a----------------------------a--------aGT-------AC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23887 13 +     30527 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35077 13 -     50087 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44848 13 +     51645 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414017 13 - 187317192 aaa-a---a--a----------a----------------------------a--------agt-------ac
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398240 13 +  25927173 aaa-a---a--a----------a----------------------------a--------agt-------ac
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47404 13 -     62418 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                24059 14 +     24253 aaa-a--aa--a----------a----------------------------a--------aGT-------AC
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43879 13 +     59329 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269807 13 +    668171 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 20994 13 +     21031 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Macaca_thibetana.k99_41370                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 1591 13 +     17132 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                221989 12 -    270270 --G-G---A--A----------A----------------------------A--------ATT--T----GC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 5
s Mandrillus_leucophaeus.scaffold280                        321091 13 +  24302211 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355923 13 -    752769 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672305 12 -    737560 --g-g---a--a----------a----------------------------a--------aaa------cac
i Manis_javanica.JSZB01003497.1                          C 0 I 7
s Manis_pentadactyla.KN006162.1                             219592 12 +    317179 --g-g---a--a----------a----------------------------a--------aaa------cac
i Manis_pentadactyla.KN006162.1                          C 0 I 7
s Marmota_marmota.CZRN01000018.1                           7499740  6 +  40650429 ------------------------------------------------------------aat------tat
i Marmota_marmota.CZRN01000018.1                         I 6 I 5
s Megaderma_lyra.MegLyr_scaffold_4542                       149145 12 +    207569 --G-G---A--A----------A----------------------------A--------AAT--T----AC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_19308             24759 12 -     74585 --G-G---A--A----------A----------------------------A--------ATT--T----AC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 5
s Mesocricetus_auratus.KB708134.1                         17427987  9 +  29670104 ---------------------------------------------------a---------aa---gtttat
i Mesocricetus_auratus.KB708134.1                        I 3 I 5
s Meriones_unguiculatus.MerUng_scaffold_7390                 47876  5 -    140813 --A-A---A--A----------A-------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     79973  9 +     93471 --g-g---a--g----------a----------------------------a--------gat---------
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 4
s Mico_argentatus.k141_582562                                 9068 11 +     17804 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9570 11 -     12984 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17884 11 -     26561 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983359 11 +  93316391 --G-A---A--A----------A----------------------------A--------ACG-------AC
i Microcebus_murinus.CM007674.1                          C 0 I 5
s Microgale_talazaci.MicTal_scaffold_6613                    44155  9 +    145209 --G-G---A--G----------A----------------------------T--------GAT---------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_2233                183382  9 +    200668 -----------A----------A----------------------------A--------AAT--T----AC
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 3 I 5
s Microtus_ochrogaster.CM001695.1                         15961123  9 +  27267610 ---------------------------------------------------a---------aa---gtttat
i Microtus_ochrogaster.CM001695.1                        I 3 I 5
s Miniopterus_natalensis.LDJU01000034.1                    6361477 12 -   8254450 --g-g---a--a----------a----------------------------a--------aat------tgc
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 5
s Miniopterus_schreibersii.MinSch_scaffold_23309             40378 12 -     48117 --G-G---A--A----------A----------------------------A--------AAT--T----GC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 5
s Miopithecus_ogouensis.k141_1534655                         21103 13 -     27822 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7273 12 +     27589 --g-g---a--a----------g----------------------------a--------att------tac
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 5
s Mirza_zaza.k141_766280                                     51148 11 -     62432 --T-T---A--A----------A----------------------------A--------ATG-------AC
i Mirza_zaza.k141_766280                                 C 0 I 5
s Monodon_monoceros.MonMon_M_scaffold_103                   351863  9 +    437263 --g-g---a--g----------a----------------------------a--------gat---------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 4
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177542  9 +    366855 -----------A----------A----------------------------A--------AAT--T----AC
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 I 5
s Moschus_moschiferus.MosMos_scaffold_13123                  23077  9 -     82753 --G-G---A--G----------A----------------------------A--------AAT---------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 4
s Mungos_mungo.MunMun_flattened_line_18455                   17280 12 -     63510 --G-G---A--G----------G----------------------------A--------AGT--T----AC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 5
s Murina_feae.MurFea_scaffold_17764                          37414 12 +     47283 --g-g---a--a----------a----------------------------a--------cat------tac
i Murina_feae.MurFea_scaffold_17764                      C 0 I 5
s Muscardinus_avellanarius.MusAve_scaffold_12866             81530  5 -     86153 -------------------------------------------------------------AA--T----AC
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 4 I 5
s Mus_caroli.LT608237.1                                   35591745  2 + 120012414 -----------a----------a-------------------------------------------------
i Mus_caroli.LT608237.1                                  I 2 C 0
s Mus_musculus.chr8                                       41686104  2 + 129401213 -----------a----------a-------------------------------------------------
i Mus_musculus.chr8                                      I 2 C 0
s Mus_pahari.LT608297.1                                   58215992  2 +  89631738 -----------a----------a-------------------------------------------------
i Mus_pahari.LT608297.1                                  I 3 C 0
s Mus_spretus.CM004101.1                                  39495424  2 + 130317789 -----------a----------a-------------------------------------------------
i Mus_spretus.CM004101.1                                 I 2 C 0
s Mustela_putorius.JH418006.1                             14353906 12 +  14710649 --G-G---A--A----------A----------------------------A--------ATT--T----AC
i Mustela_putorius.JH418006.1                            C 0 I 5
s Myotis_brandtii.KE162005.1                               9791463 12 +  10118263 --g-g---a--a----------a----------------------------a--------cat------tac
i Myotis_brandtii.KE162005.1                             C 0 I 5
s Myotis_davidii.KB100139.1                                4385824 12 +   6019432 --G-G---A--A----------A----------------------------A--------CAT--T----AC
i Myotis_davidii.KB100139.1                              C 0 I 5
s Myotis_lucifugus.GL429869.1                               381645 12 +   4330536 --g-g---a--a----------a----------------------------a--------cat------tac
i Myotis_lucifugus.GL429869.1                            C 0 I 5
s Myotis_myotis.MyoMyo_scaffold_66571                          473 12 +     18357 --G-G---A--A----------A----------------------------A--------CAT--T----AC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 5
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118353  7 +    130748 ---------------------------------------------------A--------ACA----G--AC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 4 I 5
s Nannospalax_galili.KL204047.1                             944807 18 +   3037898 --G-A---A--A----------A--------G----------G-----G--A--------AAA-GTTG--AT
i Nannospalax_galili.KL204047.1                          C 0 I 5
s Nasalis_larvatus.k141_1350636                              27773  9 +     34575 -----------a----------a----------------------------a-------aaGT-------AC
i Nasalis_larvatus.k141_1350636                          I 1 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467869 12 -  31847680 --g-g---a--a----------g----------------------------a--------att------tac
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 5
s Neophocaena_asiaeorientalis.KZ687982.1                   1226032  9 -   7148211 --g-g---a--g----------a----------------------------a--------gat---------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 4
s Noctilio_leporinus.NocLep_scaffold_7894                   126330  7 -    149072 ---------------------------------------------------A--------AAT----G--AC
i Noctilio_leporinus.NocLep_scaffold_7894                I 6 I 5
s Nomascus_annamensis.k141_1771965                           52508  9 -    132029 --------a--a----------a----------------------------a--------aGT-------AC
i Nomascus_annamensis.k141_1771965                       I 3 C 0
s Nomascus_concolor.k141_735679                               8603  9 -     16345 --------a--a----------a----------------------------a--------aGT-------AC
i Nomascus_concolor.k141_735679                          I 3 C 0
s Nomascus_gabriellae.k141_57920                             14488  9 +     22201 --------a--a----------a----------------------------a--------aGT-------AC
i Nomascus_gabriellae.k141_57920                         I 3 C 0
s Nomascus_siki_b.tarseq_93                            8412709  9 -  22158432 --------a--a----------a----------------------------a--------aGT-------AC
i Nomascus_siki_b.tarseq_93                          I 3 C 0
s Nomascus_siki_a.k141_941534                                  24886  9 -     54323 --------a--a----------a----------------------------a--------aGT-------AC
i Nomascus_siki_a.k141_941534                              I 3 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197000 12 +   9404916 --G-G---A--A----------A----------------------------A--------ATC--T----AC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 5
s Nycticebus_bengalensis.LG01                             93635023 11 + 196305487 --G-G---G--A----------A----------------------------A--------AAG-------AC
i Nycticebus_bengalensis.LG01                            C 0 I 5
s Nycticebus_coucang.k141_3846325                             1781 11 -      3937 --G-G---G--A----------A----------------------------A--------AAG-------AC
i Nycticebus_coucang.k141_3846325                        C 0 I 5
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563262 11 - 199412804 --G-G---G--A----------A----------------------------A--------AAG-------AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 5
s Ochotona_princeps.JH802162.1                             2549963 13 -   3988456 --g-a---a--a----------a---------------------------gc--------aat--T----TC
i Ochotona_princeps.JH802162.1                           C 0 I 5
s Octodon_degus.JH651603.1                                11046239  9 -  11899542 --g-a---a--a----------a-------------------------aaaa--------------------
i Octodon_degus.JH651603.1                               C 0 I 6
s Odobenus_rosmarus.KB229312.1                             1450466  9 +   2017862 --g-g---a--a----------a----------------------------a--------att---------
i Odobenus_rosmarus.KB229312.1                           C 0 I 8
s Odocoileus_virginianus.KZ100018.1                         434920  9 -    630418 --G-G---A--G----------A----------------------------A--------AAT---------
i Odocoileus_virginianus.KZ100018.1                      C 0 I 4
s Okapia_johnstoni.LVCL01S0005463.1                          12912  9 +    150152 --g-g---a--g----------a----------------------------a--------aag---------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 4
s Ondatra_zibethicus.OndZib_scaffold_7387                    91482  9 -    140218 ---------------------------------------------------A---------AT-GTT-T-AT
i Ondatra_zibethicus.OndZib_scaffold_7387                I 3 I 5
s Onychomys_torridus.OnyTor_scaffold_28377                    2341  9 -     41509 ---------------------------------------------------A---------AGGCTT---AT
i Onychomys_torridus.OnyTor_scaffold_28377               I 3 I 5
s Orcinus_orca.KB316932.1                                  8095302  9 +  10937097 --g-g---a--g----------a----------------------------a--------gat---------
i Orcinus_orca.KB316932.1                                C 0 I 4
s Orycteropus_afer.OryAfe_flattened_line_171931              12395 12 -     14239 --G-G---A--A----------A----------------------------A--------AAT--T----AT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 5
s Oryctolagus_cuniculus.CM000791.1                       107102435 13 - 174332312 --a-g---g-aa----------a----------------------------t--------aat------tac
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 5
s Otocyon_megalotis.JAEUCK010005147.1                        38042 12 +    559221 --G-G---A--A----------A----------------------------A--------ATC--T----AC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 5
s Otolemur_crassicaudatus.k141_649260                        38420 12 -     51505 --G-G--GA--A----------A----------------------------A--------AAG-------AC
i Otolemur_crassicaudatus.k141_649260                    C 0 I 5
s Otolemur_garnettii.GL873799.1                             351423 12 +   1103335 --g-g--ga--a----------a----------------------------a--------aag-------ac
i Otolemur_garnettii.GL873799.1                          C 0 I 5
s Ovis_aries.CM001607.2                                   26402901  9 -  44047080 --G-G---A--G----------A----------------------------A--------AAT---------
i Ovis_aries.CM001607.2                                  C 0 I 4
s Ovis_canadensis.OviCan_scaffold_67953                       3420  9 +     17875 --G-G---A--G----------A----------------------------A--------AAT---------
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 4
s Pan_troglodytes.CM009242.2                               1471601 12 - 189151597 -aa-a---a--t----------a----------------------------a--------agt-------ac
i Pan_troglodytes.CM009242.2                             I 301 I 76
s Panthera_onca.PanOnc_flattened_line_3271                   23213 12 -    230217 --G-G---A--A----------G----------------------------A--------AGT--T----AC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 5
s Panthera_pardus.KV860321.1                              18460539 12 -  18783137 --G-G---A--A----------G----------------------------A--------AGT--T----AC
i Panthera_pardus.KV860321.1                             C 0 I 5
s Panthera_tigris.KE722367.1                               3971259 12 +   8748460 --G-G---A--A----------G----------------------------A--------AGT--T----AC
i Panthera_tigris.KE722367.1                             C 0 I 5
s Pantholops_hodgsonii.KE114653.1                          1614344  9 +   2937107 --G-G---A--G----------A----------------------------A--------AAT---------
i Pantholops_hodgsonii.KE114653.1                        C 0 I 4
s Papio_anubis.CM001495.2                                   241931 13 - 183742232 aaa-a---a--a----------a----------------------------a--------agt-------gc
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8395 13 +     21308 aaa-a---a--a----------a----------------------------a--------aGT-------GC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  290967 13 -  20919399 aaa-a---a--a----------a----------------------------a--------aGT-------GC
i Papio_hamadryas.Contig39                               I 1533 C 0
s Papio_kindae.k141_2214839                                  21050 13 -     27687 aaa-a---a--a----------a----------------------------a--------aGT-------GC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14186 13 +     16796 aaa-a---a--a----------a----------------------------a--------aGT-------GC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 20996 13 -     23640 aaa-a---a--a----------a----------------------------a--------aGT-------GC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13852 12 +     78924 --G-G---A--A----------G----------------------------A--------AGT--T----AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 5
s Perodicticus_ibeanus.k141_1921260                          24706 11 +     31479 --G-G---G--A----------A----------------------------A--------AAG-------AC
i Perodicticus_ibeanus.k141_1921260                      C 0 I 5
s Perodicticus_potto.k141_1854441                            17070 11 -     24908 --G-G---G--A----------A----------------------------A--------AAG-------AC
i Perodicticus_potto.k141_1854441                        C 0 I 5
s Perognathus_longimembris.PerPac_flattened_line_89005         428 15 +      9367 --A-A---A--A----------A-----A-T---A----------------A--------AAC--T----AG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 5
s Peromyscus_maniculatus.KI615324.1                         245566  9 +  18517816 ---------------------------------------------------a---------ag---gtttat
i Peromyscus_maniculatus.KI615324.1                      I 3 I 5
s Petromus_typicus.PetTyp_scaffold_17301                     30674 46 -     56120 --A-G---A--A----------ACTCTTACTGCCAACAACCTGATTAAGGAG--------ATACCTTGTCAT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 5
s Phocoena_phocoena.PhoPho_flattened_line_46867              11160  9 -     15039 --G-G---A--G----------A----------------------------A--------GAT---------
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 I 4
s Piliocolobus_badius.k141_2704958                            1216 14 +     55023 aaaaa---g--a----------a----------------------------a--------aGT-------AC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          767 14 -     89929 aaaaa---g--a----------a----------------------------a--------aGT-------AC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1355 14 +     40849 aaaaa---g--a----------a----------------------------a--------aGT-------AC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253022 14 +  14605196 aaaaa---g--a----------a----------------------------a--------agt-------ac
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1594 12 +     22231 --A-A---A--A----------A----------------------------A--------AAT--T----AC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 5
s Pithecia_albicans.k141_1239476                             63666 11 +    207309 --G-A---A--A----------G----------------------------A--------ATC-------AC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4760 11 -     25401 --G-A---A--A----------G----------------------------A--------ATC-------AC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30501 11 +     58159 --G-A---A--A----------G----------------------------A--------ATC-------AC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30777 11 +     63561 --G-A---A--A----------G----------------------------A--------ATC-------AC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30540 11 +     51148 --G-A---A--A----------G----------------------------A--------ATC-------AC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555507 11 -   4542175 --G-A---A--A----------G----------------------------A--------ATC-------AC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30524 11 +     51125 --G-A---A--A----------G----------------------------A--------ATC-------AC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3244  9 -      8168 --G-G---A--G----------A----------------------------A--------GAT---------
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 I 4
s Plecturocebus_bernhardi.k141_2549090                        6928 11 +     39866 --G-A---A--A----------G----------------------------A--------ACG-------AC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2013 11 -      9282 --G-A---A--A----------G----------------------------A--------ACG-------AC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41417 11 -     87950 --G-A---A--A----------G----------------------------A--------ACG-------AC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41810 11 -     88961 --G-A---A--A----------G----------------------------A--------ACG-------AC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6509 11 -     39403 --G-A---A--A----------G----------------------------A--------ACG-------AC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41461 11 +     87928 --G-A---A--A----------G----------------------------A--------ACG-------AC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6506 11 -     60166 --G-A---A--A----------G----------------------------A--------ACG-------AC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13442 11 -     67232 --G-A---A--A----------G----------------------------A--------ACG-------AC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41358 11 -     90634 --G-A---A--A----------G----------------------------A--------ATG-------AC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42826 11 +     89403 --G-A---A--A----------G----------------------------A--------ACG-------AC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176724 13 - 189387572 aaa-a---a--a----------a----------------------------a--------agt-------ac
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191542  7 -   9816681 aaa-a---a--a----------a-------------------------------------------------
i Pongo_pygmaeus.ctg66                                   C 0 I 5
s Presbytis_comata.k141_1230337                              26353 13 +     69807 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43547 13 -     80239 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981373 11 +   4620579 --g-a---a--a----------a----------------------------a--------atg-------ac
i Prolemur_simus.MPIZ01000396.1                          C 0 I 5
s Propithecus_coquerelli.NW_012148875.1                    1564839 11 -   2598838 --g-a---a--a----------a----------------------------a--------atg-------ac
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 5
s Propithecus_coronatus.k141_209299                           2475 11 -      7103 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Propithecus_coronatus.k141_209299                      C 0 I 5
s Propithecus_diadema.k141_153680                             3072 11 -     11706 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Propithecus_diadema.k141_153680                        C 0 I 5
s Propithecus_edwardsi.k141_635656                            6808 11 -     30655 --A-A---A--A----------A----------------------------A--------ATG-------AC
i Propithecus_edwardsi.k141_635656                       C 0 I 5
s Propithecus_perrieri.k141_1496898                          33133 11 +     46564 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Propithecus_perrieri.k141_1496898                      C 0 I 5
s Propithecus_tattersalli.k141_1127767                       93404 11 -     98465 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Propithecus_tattersalli.k141_1127767                   C 0 I 5
s Propithecus_verreauxi.k141_1047036                          7041 11 +     35169 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Propithecus_verreauxi.k141_1047036                     C 0 I 5
s Psammomys_obesus.NESX01036366.1                            35449  5 +     52041 --a-a---a--a----------a-------------------------------------------------
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50424  9 -     66298 -----------a----------a----------------------------a--------aat------tac
i Pteronotus_parnellii.KE847780.1                        I 3 I 5
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3473 12 -     18639 --G-G---A--A----------A----------------------------A--------ATT--T----AC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 5
s Pteropus_alecto.KB030862.1                               5839676 12 -  28871421 --G-G---A--A----------A----------------------------A--------ATT--T----GC
i Pteropus_alecto.KB030862.1                             C 0 I 5
s Pteropus_vampyrus.KN525825.1                             3536185 12 -   4952924 --G-G---A--A----------A----------------------------A--------ATT--T----GC
i Pteropus_vampyrus.KN525825.1                           C 0 I 5
s Puma_concolor.QAVW01001104.1                            18097853 12 +  38429054 --G-G---A--A----------G----------------------------A--------AGT--T----AC
i Puma_concolor.QAVW01001104.1                           C 0 I 5
s Pygathrix_cinerea.k141_1153803                             25727 13 +     91421 -aa-a---a--a----------a----------------------------a-------aaGT-------AC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152220 13 -   7812017 -aa-a---a--a----------a----------------------------a-------aaGT-------AC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6597 13 +     72585 -aa-a---a--a----------a----------------------------a-------aaGT-------AC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51841  9 +     55069 --G-G---A--G----------A----------------------------A--------AAT---------
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 4
s Rattus_norvegicus.chr16                                 37021349  2 -  90668790 -----------a----------a-------------------------------------------------
i Rattus_norvegicus.chr16                                I 2 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913563 12 +   3329780 --g-g---a--a----------a----------------------------a--------aat------tac
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 5
s Rhinopithecus_bieti.k119_778604                              301  9 +      7119 -----------a----------a----------------------------a-------aaGT-------AC
i Rhinopithecus_bieti.k119_778604                        I 5 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120906 14 + 195417433 aaa-a---a--a----------a----------------------------a-------aagt-------ac
i Rhinopithecus_roxellana.NC_044550.1                    I 1 C 0
s Rhinopithecus_strykeri.ctg102                             235147 14 -   7961872 aaa-a---a--a----------a----------------------------a-------aaGT-------AC
i Rhinopithecus_strykeri.ctg102                          I 1 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73598 12 -    116970 --G-G---A--A----------A----------------------------A--------ATT--T----GC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 5
s Saguinus_bicolor.k141_1429097                               2804 11 +     27962 --G-A---A--A----------T----------------------------A--------ATT-------AC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2699 11 +      6077 --G-A---A--A----------T----------------------------A--------ATT-------AC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2790 11 +      5971 --G-A---A--A----------T----------------------------A--------ATC-------AC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2730 11 +      5932 --G-A---A--A----------T----------------------------A--------ATT-------AC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1055 11 -      4390 --G-A---A--A----------T----------------------------A--------ATT-------AC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390488 11 - 209938924 --G-A---A--A----------T----------------------------A--------ATT-------AC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2680 11 +      5979 --G-A---A--A----------T----------------------------A--------ATC-------AC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3422 11 -      4301 --G-A---A--A----------T----------------------------A--------ATT-------AC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6494  9 +     16473 --G-G---A--G----------A----------------------------A--------AAT---------
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 4
s Saimiri_boliviensis.NW_024100920.1                       1107826 11 + 121099817 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29388 11 -     47369 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29777 11 -     79414 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26469 11 -     34454 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13875 11 -     22428 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29020 11 -     47109 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237089 11 +   5703754 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6679 11 +     21866 --G-A---A--A----------G----------------------------A--------ATT-------AC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114782 11 +    313613 --G-A---A--A----------A----------------------------A---------GT--T----AC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 5
s Semnopithecus_entellus.k141_158471                         24039 14 +     27374 aaa-a---a--a----------a----------------------------a-------aaGT-------AC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27562  9 +     58920 -----------a----------a----------------------------a-------aaGT-------AC
i Semnopithecus_hypoleucos.k141_1910531                  I 4 C 0
s Semnopithecus_johnii.k141_843753                           14053 14 -     45317 aaa-a---a--a----------a----------------------------a-------aaGT-------AC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21712 14 -     42441 aaa-a---a--a----------a----------------------------a-------aaGT-------AC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24392 14 -     29113 aaa-a---a--a----------a----------------------------a-------aaGT-------AC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27461 14 -     48123 aaa-a---a--a----------a----------------------------a-------aaGT-------AC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47782  9 +     77746 ---------------------------------------------------A---------GA-GTT-T-AT
i Sigmodon_hispidus.SigHis_scaffold_20193                I 3 I 5
s Solenodon_paradoxus.SolPar_flattened_line_126            1857104  7 -   1910179 ---------------------------------------------------A--------AAT----G--AC
i Solenodon_paradoxus.SolPar_flattened_line_126          I 5 I 5
s Spermophilus_dauricus.KZ294078.1                         1867098  6 +   3870691 ------------------------------------------------------------aat------tat
i Spermophilus_dauricus.KZ294078.1                       I 6 I 5
s Spilogale_gracilis.SpiGra_flattened_line_13525              5240 12 -     97271 --G-G---A--A----------A----------------------------A--------ATT--T----AC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 5
s Suricata_suricatta.SurSur_flattened_line_6629             123687 12 +    196729 --G-G---G--G----------G----------------------------A--------AGT--T----AC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 5
s Sus_scrofa.CM000828.4                                    6639909 12 +  69701581 --G-G---A--G----------G----------------------------A--------AAT--T----AT
i Sus_scrofa.CM000828.4                                  C 0 I 5
s Symphalangus_syndactylus.tarseq_199                       389965 14 +   1523678 aaaaa---a--a----------a----------------------------a--------aGT-------AC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12402 12 +     22964 --G-G---A--A----------A----------------------------G--------AAT--T----AC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 4
s Tamandua_tetradactyla.TamTet_scaffold_224794                1469  7 +      5583 ---------------------------------------------------A--------ACA----G--AC
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 4 I 5
s Tapirus_indicus.TapInd_scaffold_7432                      190378 11 +    199430 --G-G---A--A----------A----------------------------A--------A-T--T----AC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 5
s Tapirus_terrestris.TapTer_scaffold_755                    104329 12 -    539355 --g-g---a--a----------a----------------------------a--------agt------tac
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 5
s Tarsius_lariang.k141_1780720                                5673 11 +      6850 --A-A---A--A----------A----------------------------A--------ATC-------AC
i Tarsius_lariang.k141_1780720                           C 0 I 5
s Tarsius_wallacei.k141_226975                                5724 11 +     20590 --A-A---A--A----------A----------------------------A--------ATC-------AC
i Tarsius_wallacei.k141_226975                           C 0 I 5
s Theropithecus_gelada.CM009954.1                           351917 15 - 186847797 aaa-a---a--a----------a----------------------------a------aaagt-------ac
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23034 14 -     33621 --G-G---A--A----------A-----A-----A----------------G--------ATA--T----AT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 5
s Tolypeutes_matacus.TolMat_scaffold_31955                   18603  7 -     31044 ---------------------------------------------------A--------TCT----G--AC
i Tolypeutes_matacus.TolMat_scaffold_31955               I 4 I 5
s Tonatia_saurophila.TonSau_scaffold_294                    478448  9 -    610378 -----------a----------a----------------------------a--------aat------tac
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 I 5
s Trachypithecus_auratus.k141_1189070                        19603  9 +     26378 -----------a----------a----------------------------a-------aaGT-------AC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32267 14 -     78344 aaa-a---a--a----------a----------------------------a-------aaGT-------AC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18924  9 +     25722 -----------a----------a----------------------------a-------aaGT-------AC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27218 14 -     62838 aaa-a---a--a----------a----------------------------a-------aaGT-------AC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27266 13 +     46913 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8072 14 -     28527 aaa-a---a--a----------a----------------------------a-------aaGT-------AC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29157 14 -     64340 aaa-a---a--a----------a----------------------------a-------aaGT-------AC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27194 14 -     63452 aaa-a---a--a----------a----------------------------a-------aaGT-------AC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8637 14 +     22490 aaa-a---a--a----------a----------------------------a-------aaGT-------AC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2065 14 -      6147 aaa-a---a--a----------a----------------------------a-------aaGT-------AC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8970 13 -     13050 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254209 14 -   6242583 aaa-a---a--a----------a----------------------------a-------aaGT-------AC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         235 13 +     19340 aaa-a---a--a----------a----------------------------a--------aGT-------AC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172111  9 -    200418 --G-G---A--G----------A----------------------------A--------AAT---------
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 4
s Trichechus_manatus.JH594705.1                            6479212 13 -  10818551 --g-g---a--a---------aa----------------------------a--------aat------tac
i Trichechus_manatus.JH594705.1                          C 0 I 5
s Tupaia_chinensis.KB320699.1                              1832631 12 -   4065304 --G-G---A--A----------A----------------------------A--------CAT--T----AC
i Tupaia_chinensis.KB320699.1                            C 0 I 8
s Tupaia_tana.TupTan_flattened_line_394                       6947 12 -     70247 --G-A---A--A----------A----------------------------A--------AAT--T----AC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 8
s Tursiops_truncatus.MRVK01000835.1                       17360041  9 -  33153633 --g-g---a--g----------a----------------------------a--------gat---------
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 4
s Uropsilus_gracilis.UroGra_scaffold_46687                     981 12 -     21056 --G-G---G--A----------A----------------------------A--------GAT--T----AC
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 5
s Ursus_maritimus.KK499267.1                                180625 12 +   5085361 --G-G---A--A----------A----------------------------A--------ATT--T----AC
i Ursus_maritimus.KK499267.1                             C 0 I 5
s Varecia_rubra.k141_787544                                  24017 11 -     30710 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Varecia_rubra.k141_787544                              C 0 I 5
s Varecia_variegata.k141_289850                              22924 11 -    147434 --G-A---A--A----------A----------------------------A--------ATG-------AC
i Varecia_variegata.k141_289850                          C 0 I 5
s Vicugna_pacos.KN270157.1                                   75120 12 +   5488506 --G-G---A--A----------A----------------------------A--------ATT--T----AC
i Vicugna_pacos.KN270157.1                               C 0 I 5
s Vulpes_lagopus.VulLag_flattened_line_12041                103764 12 -    112863 --G-G---A--A----------A----------------------------A--------ATC--T----AG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 5
s Xerus_inauris.XerIna_scaffold_2302                        172876  6 -    224448 ------------------------------------------------------------AAT--T----AT
i Xerus_inauris.XerIna_scaffold_2302                     I 6 I 5
s Zalophus_californianus.ZalCal_flattened_line_17732         27664 12 -     86975 --g-g---a--a----------a----------------------------a--------att------tac
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 5
s Zapus_hudsonius.ZapHud_scaffold_211135                      2153 17 +      3117 --A-G---A--A----------A--------G----------G-----G--A--------AAA----GTTAC
i Zapus_hudsonius.ZapHud_scaffold_211135                 I 10 I 47
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751  0 -    498745 C
e Equus_caballus.CM000403.2                               21373965  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041  0 -   4378816 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4260 20 +     36723 tt--g-ag-aggatatgaaaaa-----c------------T
s Acinonyx_jubatus.LLWD01001279.1                           811609 20 +   1699592 TT--G-GG-AGAATATCAGGAA-----A------------G
i Acinonyx_jubatus.LLWD01001279.1                        I 5 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414136 20 +  29979442 tt--g-gg-aatatatcaggaa-----a------------g
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 5 C 0
s Ailurus_fulgens.LNAC01001112.1                            214234 20 +    347723 TT--A-GG-AGTATATCAGTAA-----A------------T
i Ailurus_fulgens.LNAC01001112.1                         I 5 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16739  8 -     61208 TT--G-AA-------------G-----T------------A
i Allactaga_bullata.AllBul_scaffold_20030                I 5 I 9
s Allenopithecus_nigroviridis.k141_3755588                   46583 20 +     53615 TT--G-AG-AGGATATCAAAAA-----C------------T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42528 20 +     44087 TT--G-AG-AGGATATCAAAAA-----C------------T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15165 20 -     21945 TT--G-AG-AGGATATCAAAAA-----C------------T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16838 20 +     32033 TT--G-AG-AGGATATCAAAAA-----C------------T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             70984 20 -     84148 TT--G-AG-AGGATATCAAAGA-----C------------T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43217 20 -     78289 TT--G-AG-AGGATATCAAAGA-----C------------T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42663 20 +     55831 TT--G-AG-AGGATATCAAAGA-----C------------T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41104 20 -     64179 TT--G-AG-AGGATATCAAAGA-----C------------T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22751 20 -     24835 TT--G-AG-AGGATATCAAAGA-----C------------T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39734 20 +     45454 TT--G-AG-AAGATATCAAAGA-----C------------T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45432 20 +     70886 TT--G-AG-AGGATATCAAAGA-----C------------T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7557 20 +     30854 TT--G-AG-AGGATATCAAAGA-----C------------T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31696 20 +     42133 TT--G-AG-AGGATATCAAAGA-----C------------T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583975 20 +   2318259 TT--T-GG-ACGTTATCAGGAA-----A------------G
i Ammotragus_lervia.NIVO01071767.1                       I 3 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175424 21 -    412891 tt--g-ggggggatatcaggaa-----a------------g
i Anoura_caudifer.AnoCau_scaffold_1412                   I 5 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49075 20 -     68529 TT--T-GG-AGGTTATCAGGAA-----A------------G
i Antilocapra_americana.AntAmePen_scaffold_21030         I 4 C 0
s Aotus_azarae.k141_118258                                   49486 20 -     65372 TT--G-AG-AGGATAACAAAGC-----C------------T
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43240 20 +     43593 TT--G-AG-AGGATAACAAAGC-----C------------T
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671253 20 +   5030052 TT--G-AG-AGGATAACAAAGC-----C------------T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22895 20 -     23494 TT--G-AG-AGGATAACAAAGC-----T------------T
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                8031 20 +      8415 TT--G-AG-AGGATAACAAAGC-----T------------T
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14780 20 -     32367 TT--A-AG-AGAATATCAGGAA-----A------------A
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 5 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3717 20 -     15198 tg--g-gg-aggatatcaggaa-----a------------g
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 5 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273496 20 +  21539123 TT--G-AG-AGGATATCAAAGA-----C------------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9662 20 +     48076 TT--G-AG-AGGATATCAAAGA-----C------------T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4799 20 -     28759 TT--G-AG-AGGATATCAAAGA-----C------------T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32353 20 +     44353 TT--G-AG-AGGATATCAAAGA-----C------------T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47723 20 -     71267 TT--G-AG-AGGATATCAAAGA-----C------------T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21783 20 -     33135 TT--G-AG-AGGATATCAAAGA-----C------------T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4971 19 +     11645 TT--G-AG-AGGATATCAGGA------A------------G
i Avahi_laniger.k141_2756659                             I 5 C 0
s Avahi_peyrierasi.k141_1823318                               4977 19 -     19611 TT--G-AG-AGAATATCAGGA------A------------G
i Avahi_peyrierasi.k141_1823318                          I 5 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955804 20 -  23207421 TC--T-GG-AGGATATCAGGAA-----A------------T
i Balaenoptera_acutorostrata.KI537508.1                  I 4 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3013 20 -      4711 TC--T-GG-AGGATATCAGGAA-----A------------T
i Balaenoptera_bonaerensis.DF507193.1                    I 4 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84971 20 +    124022 TT--T-GG-ACGTTATCAGGAA-----A------------G
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 4 C 0
s Bison_bison.KN261452.1                                     20504 20 +    288883 TT--T-GG-AGGTTATCAGGAA-----A------------G
i Bison_bison.KN261452.1                                 I 4 C 0
s Bos_indicus.CM003047.1                                  20354891 20 +  48749331 TT--T-GG-AGGTTATCAGGAA-----A------------G
i Bos_indicus.CM003047.1                                 I 4 C 0
s Bos_mutus.JH880303.1                                      753459 20 +   1948126 TT--T-GG-AGGTTATCAGGAA-----A------------G
i Bos_mutus.JH880303.1                                   I 4 C 0
s Bos_taurus.CM000203.6                                   27543598 20 -  45695690 TT--T-GG-AGGTTATCAGGAA-----A------------G
i Bos_taurus.CM000203.6                                  I 4 C 0
s Bubalus_bubalis.KI419123.1                               1528622 20 -   4408762 TT--T-GG-AGGCTATCAGGAA-----A------------G
i Bubalus_bubalis.KI419123.1                             I 4 C 0
s Cacajao_ayresi.k141_96119                                   6690 20 +     28062 TG--G-AG-AGGATATCAAAGA-----C------------T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  41984 20 -     91139 TG--G-AG-AGGATATGAAAGA-----C------------T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19510 20 +     95584 TG--G-AG-AGGATATCAAAGA-----C------------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19423 20 +    119600 TG--G-AG-AGGATATCAAAGA-----C------------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             8969 20 +     18648 TT--G-AG-AGGATATCAAAGA-----C------------T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8507 20 -     13885 TT--G-AG-AGGATATCAAAGA-----C------------T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             575 20 -      8861 TT--G-AG-AGGATATCAAAGA-----C------------T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452968 20 + 189096842 TT--G-AG-AGGATATCAAAGA-----C------------T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                491 20 +      8664 TT--G-AG-AGGATATCAAAGA-----C------------T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629799 20 +  17673402 TT--G-GG-AGGATATCAGGAA-----A------------G
i Camelus_bactrianus.KN276810.1                          I 5 C 0
s Camelus_dromedarius.KN272107.1                           4664085 20 +   7040546 TT--G-GG-AGGATATCAGGAA-----A------------G
i Camelus_dromedarius.KN272107.1                         I 5 C 0
s Camelus_ferus.KB017975.1                                 1207745 20 +   1652518 TT--G-GG-AGGATATCAGGAA-----A------------G
i Camelus_ferus.KB017975.1                               I 5 C 0
s CanFam4.chr16                                           42504151 20 +  60362399 TT--G-GG-AGTATATCAAGAA-----A------------G
i CanFam4.chr16                                          I 5 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7787 20 -     23171 TT--G-GG-AGTATATCAAGAA-----A------------G
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 5 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221130 20 +   9314153 TT--G-GG-AGTATATCAAGAA-----A------------G
i Canis_lupus_dingo.QKWQ01000480.1                       I 5 C 0
s Canis_lupus_familiaris.chr16                            41614265 20 +  59632846 TT--G-GG-AGTATATCAAGAA-----A------------G
i Canis_lupus_familiaris.chr16                           I 5 C 0
s Canis_lupus_orion.HG994398.1                            45105846 20 -  63665305 TT--G-GG-AGTATATCAAGAA-----A------------G
i Canis_lupus_orion.HG994398.1                           I 5 C 0
s Capra_aegagrus.CM003241.1                               27407687 20 -  46296322 TT--T-GG-ACGTTATCAGGGA-----A------------G
i Capra_aegagrus.CM003241.1                              I 4 C 0
s Capra_hircus.CM004588.1                                 26589960 20 +  44709034 TT--T-GG-ACGTTATCAGGGA-----A------------G
i Capra_hircus.CM004588.1                                I 4 C 0
s Carlito_syrichta.NW_007259797.1                           269063 20 +    496798 tc--C-AG-AGGATATCAGGAA-----A------------G
i Carlito_syrichta.NW_007259797.1                        I 5 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               4006 20 +      5315 TT--G-GG-AGGATATCCGGAA-----A------------G
i Carollia_perspicillata.CarPer_scaffold_170178          I 5 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75465 20 -    217609 TT--G-GG-AGGATATCAGGAA-----A------------A
i Catagonus_wagneri.CatWag_scaffold_2839                 I 5 C 0
s Cavia_aperea.AVPZ01000300.1                              4994729 13 +  23392119 TT--A-AT-A------------GGCTAA------------T
i Cavia_aperea.AVPZ01000300.1                            I 5 I 5
s Cavia_porcellus.DS562891.1                               4998171 13 +  23407841 TT--A-AT-A------------GGCTAA------------T
i Cavia_porcellus.DS562891.1                             I 5 I 5
s Cavia_tschudii.CavTsc_scaffold_23560                       61272 13 -     66877 TT--A-AT-A------------GGCTAA------------T
i Cavia_tschudii.CavTsc_scaffold_23560                   I 5 I 5
s Cebuella_niveiventris.k141_592277                           3888 20 -     12580 TT--G-AG-AGGATATCAAAGA-----C------------T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41943 20 +     53515 TT--G-AG-AGGATATCAAAGA-----C------------T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369881 20 -  26074798 TT--G-AG-AGGATATCAAAGA-----C------------T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6770 20 -     34880 TT--G-AG-AGGATATCAAAGA-----C------------T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65865 20 -     89041 TT--G-AG-AGGATATCAAAGA-----C------------T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                          994 20 -      5494 TC--C-AG-AGGATATCAGGAA-----A------------G
i Cephalopachus_bancanus.k141_1689090                    I 5 C 0
s Ceratotherium_simum.JH767749.1                          15490942 20 -  27778364 TT--G-GG-AGGATCTCAGGAA-----A------------G
i Ceratotherium_simum.JH767749.1                         I 5 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17775 20 +     27315 TT--G-GG-AGGATCTCAGGAA-----A------------G
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 5 C 0
s Cercocebus_atys.KQ010504.1                                139759 20 -   4669795 tt--g-AG-AGGATATCAAAAA-----C------------T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43500 20 +     47900 TT--G-AG-AGGATATCAAAAA-----C------------T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43332 20 -     44860 TT--G-AG-AGGATATCAAAAA-----C------------T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43315 20 -    148725 TT--G-AG-AGGATATCAAAAA-----C------------T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25538 20 -     40656 TT--G-AG-AGGATATCAAAAA-----C------------T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5507 20 +     20796 TT--G-AG-AGAATATCAAAAA-----C------------T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10577 20 -     17524 TT--G-AG-AGGATATCAAAAA-----C------------T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26298 20 -     34525 TT--G-AG-AGGATATCAAAAA-----C------------T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10128 20 -     25376 TT--G-AG-AGGATATCAAAAA-----C------------T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362722 20 -  39242232 TT--G-AG-AGGATATCAAAAA-----C------------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268435 20 +  21565898 TT--G-AG-AGGATATCAAAAA-----C------------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30774 20 -     45857 TT--G-AG-AGGATATCAAAAA-----C------------T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25711 20 -     32606 TT--G-AG-AGGATATCAAAAA-----C------------T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1868 20 +      8499 TT--G-AG-AGGATATCAAAAA-----C------------T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24269 20 +     70610 TT--G-AG-AGGATATCAAAAA-----C------------T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21192 20 +     36323 TT--G-AG-AGGATATCAAAAA-----C------------T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11579 20 -     19938 TT--G-GG-AAGGTATCTGGAA-----A------------G
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 5 C 0
s Cheirogaleus_major.k141_666340                             29389 19 -     33796 TT--G-AT-AGGATATCAGGA------A------------G
i Cheirogaleus_major.k141_666340                         I 5 C 0
s Cheirogaleus_medius.k141_759766                             3906 19 -     15404 TT--G-AT-AGGATATCAGGA------A------------G
i Cheirogaleus_medius.k141_759766                        I 5 C 0
s Cheracebus_lucifer.k141_2312002                             7771 20 -     32913 TT--G-AG-AGGATCTCAAAGA-----C------------T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18184 20 -     40346 TT--G-AG-AGGATCTCAAAGA-----C------------T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18439 20 +    216457 TT--G-AG-AGGATCTCAAAGA-----C------------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18232 20 +     39636 TT--G-AG-AGGATCTCAAAGA-----C------------T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2817 20 +      5346 TT--G-AG-AGGATATAAAAAA-----C------------T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41318 20 -    112038 TG--G-AG-AGGATATCAAGGA-----C------------T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6890 20 +     34062 TG--G-AG-AGGATATCAAGGA-----C------------T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342087 20 +  18827391 TT--G-AG-AGGATATCAAAAA-----C------------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8633 20 -     44032 TT--G-AG-AGGATATCAAAAA-----C------------T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303412 20 - 135778131 tt--g-ag-aGGATATCAAAAA-----C------------T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10632 20 +     15858 TT--G-GG-AGGATACCTGGAA-----A------------T
i Choloepus_didactylus.ChoDid_scaffold_70559             I 5 C 0
s Choloepus_hoffmanni.KN194906.1                            602208 20 -    839153 TT--G-GG-AGGATACCTGGAA-----A------------T
i Choloepus_hoffmanni.KN194906.1                         I 5 C 0
s Colobus_angolensis.KN981557.1                             407858 20 -   2368649 tt--g-ag-aGGGTATCAAAAA-----C------------T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377735 20 - 200372422 TT--G-AG-AGGGTATCAAAAA-----C------------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1282 20 -     84244 TT--G-AG-AGGGTATCAAAAA-----C------------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806008 20 +  53390261 TT--G-GG-AGGATAATAGGAA-----A------------G
i Condylura_cristata.JH655891.1                          I 5 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1580 18 -      8242 ----G-GG-AGAATATCAGGAA-----C------------A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 5 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41002  9 -     83289 TT--G-TAG------------A-----T------------A
i Cricetomys_gambianus.CriGam_scaffold_14425             I 5 I 9
s Cricetulus_griseus.LT883664.1                          213113451  9 - 224834208 tt--g-aag------------a-----t------------a
i Cricetulus_griseus.LT883664.1                          I 5 I 9
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3062 20 +     87169 TT--G-GG-ATAATATCAGGAA-----A------------G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 5 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643540  8 -   1526836 AA--A-AC-A-----------------T------------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 5 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3748 13 +     50838 TT--A-AG-A------------GGCCAG------------T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 21 I 7
s Cuniculus_paca.CunPac_flattened_line_7025                   2647 13 +     36344 TT--G-AC-A------------GGTTAA------------T
i Cuniculus_paca.CunPac_flattened_line_7025              I 5 I 7
s Dasyprocta_punctata.DasPun_flattened_line_15900            26417 13 +     75252 TT--G-AC-A------------GGCTAA------------T
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 5 I 7
s Dasypus_novemcinctus.JH564415.1                          2108922 20 -   2246927 TT--G-AG-AGGATATCTGGAA-----A------------G
i Dasypus_novemcinctus.JH564415.1                        I 5 C 0
s Daubentonia_madagascariensis.ctg71                        291343 19 +  12879189 TT--G-AG-AGGACATCAGGA------A------------G
i Daubentonia_madagascariensis.ctg71                     I 5 C 0
s Delphinapterus_leucas.KZ290073.1                        18624133 20 -  35494412 tc--t-gg-aggatatcaggaa-----a------------g
i Delphinapterus_leucas.KZ290073.1                       I 4 C 0
s Desmodus_rotundus.KZ672289.1                            11863455 20 -  20541912 tt--g-gg-agggtatcaggaa-----a------------g
i Desmodus_rotundus.KZ672289.1                           I 5 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663233 20 -   1390856 TT--G-GG-AGGATCTCAGGAA-----A------------G
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 5 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138019 20 -    198055 TT--G-GG-AGGATCTCAGGAA-----A------------G
i Diceros_bicornis.DicBicMic_scaffold_5955               I 5 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97223 13 -    115145 TT--G-AT-G------------GGCTAT------------T
i Dinomys_branickii.DinBra_scaffold_10381                I 12 I 7
s Dipodomys_ordii.KN672350.1                              18949097  6 -  37912305 AT--A-AG-------------G-------------------
i Dipodomys_ordii.KN672350.1                             I 5 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4044  6 -     10735 AT--A-AG-------------G-------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 5 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8692 13 +     14636 TT--A-AC-A------------GGCTAA------------T
i Dolichotis_patagonum.DolPat_scaffold_80628             I 5 I 7
s Echinops_telfairi.JH980293.1                            62853070  7 - 111700974 -----------------AGAGG-----A------------T
i Echinops_telfairi.JH980293.1                           I 1 C 0
s Eidolon_helvum.AWHC01266696.1                               5043 20 +     19438 GT--G-GG-AGGATATTAGGAA-----A------------A
i Eidolon_helvum.AWHC01266696.1                          I 5 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238362 20 -    607251 TT--T-GG-AGGTTATCAGGAA-----A------------G
i Elaphurus_davidianus.JRFZ01104969.1                    I 4 C 0
s Elephantulus_edwardii.JH947257.1                         9107106 20 -  10337057 TT--G-AG-AGGATATCAAGTC-----A------------T
i Elephantulus_edwardii.JH947257.1                       I 5 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29725  9 +    110024 tt--g-aag------------a-----t------------a
i Ellobius_lutescens.LOEQ01008920.1                      I 5 I 9
s Ellobius_talpinus.LOJH01026522.1                           11700  9 +     18970 tt--g-aag------------a-----t------------a
i Ellobius_talpinus.LOJH01026522.1                       I 5 I 9
s Enhydra_lutris.KZ291758.1                               24914888 20 +  41312741 TT--A-AG-AGTATATCAGGAA-----A------------T
i Enhydra_lutris.KZ291758.1                              I 5 C 0
s Eptesicus_fuscus.JH977646.1                             12577084 20 +  14770903 tt--g-ga-aggatagcaggaa-----a------------a
i Eptesicus_fuscus.JH977646.1                            I 5 C 0
s Erythrocebus_patas.Contig38                               261613 20 +  21539334 TT--G-CG-AGGATATCATAAA-----C------------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63683 20 -    133382 tc--t-gg-aggaaatcaggaa-----a------------g
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 4 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3900 20 +      7672 TC--T-GG-AGGATATCAGGAA-----A------------G
i Eubalaena_japonica.EubJap_flattened_line_118172        I 4 C 0
s Eulemur_albifrons.k141_51491                               13515 19 -     24895 TT--G-AG-AGAATATCAGGA------A------------G
i Eulemur_albifrons.k141_51491                           I 5 C 0
s Eulemur_collaris.k141_601111                               41224 19 -     70999 TT--G-AG-AGAATATCAGGA------A------------G
i Eulemur_collaris.k141_601111                           I 5 C 0
s Eulemur_coronatus.k141_384460                              85186 19 +    112731 TT--G-AG-AGGATATCAGGA------A------------G
i Eulemur_coronatus.k141_384460                          I 5 C 0
s Eulemur_flavifrons.k141_433119                             41759 19 +     68309 TT--G-AG-AGGATATCAAGA------A------------G
i Eulemur_flavifrons.k141_433119                         I 5 C 0
s Eulemur_fulvus.k141_636316                                 52081 19 -     65740 TT--G-AG-AGGATATCAGGA------A------------G
i Eulemur_fulvus.k141_636316                             I 5 C 0
s Eulemur_macaco.k141_1562045                                22714 19 -     75513 TT--G-AG-AGGATATCAAGA------A------------G
i Eulemur_macaco.k141_1562045                            I 5 C 0
s Eulemur_mongoz.k141_232305                                 46907 19 -     97555 TT--G-AG-AGGATATCAGGA------A------------G
i Eulemur_mongoz.k141_232305                             I 5 C 0
s Eulemur_rubriventer.k141_1423786                            3632 19 +     30972 TT--G-AG-AGGATATCAGGA------A------------G
i Eulemur_rubriventer.k141_1423786                       I 4 C 0
s Eulemur_rufus.k141_514691                                  41354 19 -     52037 TT--G-AG-AGAATATCAGGA------A------------G
i Eulemur_rufus.k141_514691                              I 5 C 0
s Eulemur_sanfordi.k141_1122526                              57758 19 -    111500 TT--G-AG-AGGATATCAGGA------A------------G
i Eulemur_sanfordi.k141_1122526                          I 5 C 0
s Felis_catus.CM001381.2                                 186245522 20 - 206538554 TT--G-GC-AGAATATCAGGAA-----A------------G
i Felis_catus.CM001381.2                                 I 5 C 0
s Felis_catus_fca126.CM031415.1                          185115307 20 - 205367284 TT--G-GC-AGAATATCAGGAA-----A------------G
i Felis_catus_fca126.CM031415.1                          I 5 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26409 20 -     30238 TT--G-GC-AGACTATCAGGAA-----A------------G
i Felis_nigripes.FelNig_flattened_line_31944             I 5 C 0
s Galago_moholi.ctg3793                                     123284 20 -    137831 CT--G-AG-GAGATATCAGGAG-----G------------G
i Galago_moholi.ctg3793                                  I 5 C 0
s Galago_senegalensis.k141_991736                             6829 20 +     22493 CT--G-AG-GAGATCTCAGGAG-----G------------G
i Galago_senegalensis.k141_991736                        I 5 C 0
s Galagoides_demidoff.k141_561628                            18880 20 -     32986 CT--G-AG-CAGATATCAGGAG-----G------------G
i Galagoides_demidoff.k141_561628                        I 5 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17833 18 +     18121 TT--G-A---GGATATCAGAAA-----A------------G
i Galeopterus_variegatus.GalVar_scaffold_74466           I 5 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90041 20 -     95226 TT--T-GG-AGGTTATCAGGAA-----A------------G
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 4 C 0
s Glis_glis.GliGli_scaffold_33859                            32957 20 -     36801 TT--A-AA-AGGATATTGGGAA-----G------------G
i Glis_glis.GliGli_scaffold_33859                        I 5 C 0
s Gorilla_beringei.k141_3358147                               4577 20 -      8343 TT--G-AG-AGGATATGAAAAA-----C------------T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253588 20 - 186649187 tt--g-ag-AGGATATGAAAAA-----C------------T
i Gorilla_gorilla.LT578341.1                             I 293 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     455 20 -     78134 TT--A-AG-AGGATATTGGGAA-----G------------A
i Graphiurus_murinus.GraMur_scaffold_10447               I 12 C 0
s Hapalemur_alaotrensis.k141_330369                          13441 19 -     40692 TT--G-AG-AGGAAATAAGGA------A------------G
i Hapalemur_alaotrensis.k141_330369                      I 5 C 0
s Hapalemur_gilberti.k141_646465                             34843 19 +     49394 TT--G-AG-AGGATATCAGGA------A------------G
i Hapalemur_gilberti.k141_646465                         I 5 C 0
s Hapalemur_griseus.k141_763500                              59712 19 -     66874 TT--G-AG-AGGATATCAGGA------A------------G
i Hapalemur_griseus.k141_763500                          I 5 C 0
s Hapalemur_meridionalis.k141_258450                          8585 19 -     42923 TT--G-AG-AGGAAATAAGGA------A------------G
i Hapalemur_meridionalis.k141_258450                     I 5 C 0
s Hapalemur_occidentalis.k141_578367                         15585 19 -     53142 TT--G-AG-AGGAAATAAGGA------A------------G
i Hapalemur_occidentalis.k141_578367                     I 5 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29544 20 -    327341 TT--G-GG-ATAATATCAGGAA-----A------------G
i Helogale_parvula.HelPar_flattened_line_2585            I 5 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7794 20 +     48891 TT--T-GG-ACGTTATCAGGAA-----A------------G
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 4 C 0
s Heterocephalus_glaber.JH602082.1                         1925821 13 -  22651954 tt--g-ac-A------------GGCTAT------------T
i Heterocephalus_glaber.JH602082.1                       I 5 I 54
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6397 20 -     36432 TT--T-GG-AGGATATCGGGAA-----A------------G
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 4 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49564 19 +     49977 TT--G-GG-AGGATATAAG-AA-----A------------T
i Hipposideros_galeritus.HipGal_scaffold_23202           I 5 C 0
s Hoolock_leuconedys.ctg274                                    141595 20 -    630532 TT--G-AG-AGGATATGAAAAA-----C------------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68466 20 +     83186 TT--G-GA-AAAATATCAGGAA-----A------------G
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 233 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70120 13 +    143317 TG--A-AC-A------------GGCTAA------------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 5 I 7
s Hylobates_agilis.k141_1155965                               4625 20 +     12352 TT--G-AG-AGGATATGAAAAA-----C------------T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11809 20 +     55766 TT--G-AG-AGGATATGAAAAA-----C------------T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051407 20 + 191637585 TT--G-AG-AGGATATGAAAAA-----C------------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800285 20 +  11177569 TT--G-AG-AGGATATGAAAAA-----C------------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385530 20 +   7955117 tt--a-ag-agGATACAAGGAA-----A------------G
i Ictidomys_tridecemlineatus.JH393364.1                  I 5 C 0
s Indri_indri.k141_2415743                                    1094 19 +     11955 TT--G-AG-AGGATATCAGGA------A------------G
i Indri_indri.k141_2415743                               I 5 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1920 20 -     16823 TC--T-GG-AGGATATCATGAA-----A------------G
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 4 C 0
s Jaculus_jaculus.JH725527.1                               1237923  8 +   9596543 TT--G-AA-------------G-----G------------A
i Jaculus_jaculus.JH725527.1                             I 5 I 9
s Kogia_breviceps.KogBre_flattened_line_3970                 64406 20 -     97402 TC--T-GG-AGGATATCAGGAA-----A------------G
i Kogia_breviceps.KogBre_flattened_line_3970             I 4 C 0
s Lagothrix_lagothricha.k141_246028                          42038 20 +    110728 TT--G-AG-AGGATATCAAAGA-----C------------T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60953 20 -     65777 TT--G-GG-AGGCTATCAGGAA-----A------------A
i Lasiurus_borealis.LasBor_scaffold_16567                I 5 C 0
s Lemur_catta.scaffold_24                                 14758234 19 +  30322482 TT--G-AG-AGGATATCAGGA------A------------G
i Lemur_catta.scaffold_24                                I 5 C 0
s Leontocebus_fuscicollis.k141_2994775                        2953 20 -     13097 TT--G-AG-AGGATATAAAAAA-----C------------T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2708 20 +      5940 TT--G-AG-AGGATATAAAAAA-----C------------T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2538 20 -      5717 TT--G-AG-AGGATATAAAAAA-----C------------T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8905 20 -     11567 TT--G-AG-AGGATATCAAAGA-----C------------T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10286 20 -     12945 TT--G-AG-AGGATATCAAAGA-----C------------T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7763 19 +     29618 TG--G-AG-AGGATATCAGGA------A------------G
i Lepilemur_ankaranensis.k141_567626                     I 5 C 0
s Lepilemur_dorsalis.k141_387009                              7759 19 +     31569 TG--G-AG-AGGATATCAGGA------A------------G
i Lepilemur_dorsalis.k141_387009                         I 5 C 0
s Lepilemur_ruficaudatus.k141_330196                          7771 19 +     24756 TG--G-AG-AGGATATCAGGA------A------------G
i Lepilemur_ruficaudatus.k141_330196                     I 5 C 0
s Lepilemur_septentrionalis.k141_360456                       7769 19 +     16388 TG--G-AG-AGGATATCAGGA------A------------G
i Lepilemur_septentrionalis.k141_360456                  I 5 C 0
s Leptonychotes_weddellii.KB714746.1                        812283 20 -   3914936 tt--g-gg-agtatatcaggaa-----a------------g
i Leptonychotes_weddellii.KB714746.1                     I 5 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16616 20 +     24238 TT--G-AG-AGGATATCAGAAA-----A------------G
i Lepus_americanus.LepAme_scaffold_56121                 I 5 C 0
s Lipotes_vexillifer.KE559953.1                             333440 20 +    662738 TC--T-GG-AGGATATCAGGAA-----A------------G
i Lipotes_vexillifer.KE559953.1                          I 4 C 0
s Lophocebus_aterrimus.ctg367                               331717 20 -   1826925 TT--G-AG-AGGATATCAAAAA-----C------------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9041 20 +     19643 CT--G-AG-GAGATATCAGGAG-----G------------G
i Loris_lydekkerianus.k141_2031736                       I 5 C 0
s Loris_tardigradus.ctg83                                  5042702 20 -   6120653 CT--G-AG-GAGATATCAGGAG-----G------------G
i Loris_tardigradus.ctg83                                I 5 C 0
s Loxodonta_africana.GL010049.1                           39079781 20 +  43346337 tt--g-gg-aggatatcaggga-----a------------t
i Loxodonta_africana.GL010049.1                          I 5 C 0
s Lycaon_pictus.CM007581.1                                41613420 20 +  59628241 TT--G-GG-AGTATATCAGGAA-----A------------G
i Lycaon_pictus.CM007581.1                               I 5 C 0
s Macaca_arctoides.k141_1757516                              44034 20 -     61512 TT--G-AG-AGGATATCAAAAA-----C------------T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371694 20 -  60120075 TT--G-AG-AGGATATCAAAAA-----C------------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23947 20 +     30207 TT--G-AG-AGGATATCAAAAA-----C------------T
i Macaca_cyclopis.k119_263443                            I 5 C 0
s Macaca_fascicularis.k141_1397292                           21050 20 -     24934 TT--G-AG-AGGATATCAAAAA-----C------------T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23900 20 +     30527 TT--G-AG-AGGATATCAAAAA-----C------------T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35090 20 -     50087 TT--G-AG-AGGATATCAAAAA-----C------------T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44861 20 +     51645 TT--G-AG-AGGATATCAAAAA-----C------------T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414030 20 - 187317192 tt--g-ag-aGGATATCAAAAA-----C------------T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398253 20 +  25927173 tt--g-ag-aGGATATCAAAAA-----C------------T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47417 20 -     62418 TT--G-AG-AGGATATCAAAAA-----C------------T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                24073 20 +     24253 TT--G-AG-AGGATATCAAAAA-----C------------T
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43892 20 +     59329 TT--G-AG-AGGATATCAAAAA-----C------------T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269820 20 +    668171 TT--G-AG-AGGATATCAAAAA-----C------------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_41370                                 21007 20 +     21031 TT--G-AG-AGGATATCAAAAA-----C------------T
i Macaca_thibetana.k99_41370                             C 0 N 0
s Macaca_tonkeana.k141_339739                                 1604 20 +     17132 TT--G-AG-AGGATATCAAAAA-----C------------T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222006 20 -    270270 GT--G-GG-AGGATATAAGGAA-----A------------G
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 5 C 0
s Mandrillus_leucophaeus.scaffold280                        321104 20 +  24302211 TT--G-AG-AGGATATCAAAAA-----C------------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355936 20 -    752769 TT--G-AG-AGGATATCAAAAA-----C------------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672324 17 -    737560 ------GG-AGGGTATCAGGAA-----A------------G
i Manis_javanica.JSZB01003497.1                          I 7 C 0
s Manis_pentadactyla.KN006162.1                             219611 17 +    317179 ------GG-AGGGTAACAGGAA-----A------------G
i Manis_pentadactyla.KN006162.1                          I 7 C 0
s Marmota_marmota.CZRN01000018.1                           7499751 20 +  40650429 tt--a-ag-agGATATAAGGAA-----A------------A
i Marmota_marmota.CZRN01000018.1                         I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149162 20 +    207569 TT--G-GG-ACGACATCAGGAA-----A------------G
i Megaderma_lyra.MegLyr_scaffold_4542                    I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24776 20 -     74585 TT--A-AG-AGTATATCAGGAA-----A------------T
i Mellivora_capensis.MelCap_flattened_line_19308         I 5 C 0
s Mesocricetus_auratus.KB708134.1                         17428001  9 +  29670104 tt--g-aag------------a-----t------------g
i Mesocricetus_auratus.KB708134.1                        I 5 I 9
s Mesoplodon_bidens.MesBid_scaffold_6114                     79986 20 +     93471 tc--t-gg-aggatatcaggaa-----a------------c
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 4 C 0
s Mico_argentatus.k141_582562                                 9079 20 +     17804 TT--G-AG-AGGATATCAAAGA-----C------------T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9581 20 -     12984 TT--G-AG-AGGATATCAAAGA-----C------------T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17895 20 -     26561 TT--G-AG-AGGATATCAAAGA-----C------------T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983375 19 +  93316391 TT--T-AG-AGGGTATCAGTA------A------------G
i Microcebus_murinus.CM007674.1                          I 5 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44165  7 +    145209 -----------------AAAGG-----G------------T
i Microgale_talazaci.MicTal_scaffold_6613                I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183396 20 +    200668 TT--G-AG-AGGATATCAGGAA-----A------------G
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 5 C 0
s Microtus_ochrogaster.CM001695.1                         15961137  9 +  27267610 tt--g-aag------------a-----t------------a
i Microtus_ochrogaster.CM001695.1                        I 5 I 9
s Miniopterus_natalensis.LDJU01000034.1                    6361494 20 -   8254450 TT--G-GG-AGGACATCAGAAA-----A------------G
i Miniopterus_natalensis.LDJU01000034.1                  I 5 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40395 20 -     48117 TT--G-GG-AGGACATCAGAAA-----A------------G
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 5 C 0
s Miopithecus_ogouensis.k141_1534655                         21116 20 -     27822 TT--G-AG-AGGATATCAAAAA-----C------------T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7290 20 +     27589 tt--g-gg-agtatatcaggaa-----a------------g
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 5 C 0
s Mirza_zaza.k141_766280                                     51164 21 -     62432 TTGAG-AG-AGGGTATCCGTA------A------------G
i Mirza_zaza.k141_766280                                 I 5 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351876 20 +    437263 tc--t-gg-aggatatcaggaa-----a------------g
i Monodon_monoceros.MonMon_M_scaffold_103                I 4 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177556 20 +    366855 TT--G-GG-AGGACATCAGGAA-----A------------G
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 5 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23090 20 -     82753 TT--T-GG-AGGCTATCAGGAA-----A------------G
i Moschus_moschiferus.MosMos_scaffold_13123              I 4 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17297 20 -     63510 TT--G-CT-ATAATATCAGGAA-----A------------G
i Mungos_mungo.MunMun_flattened_line_18455               I 5 C 0
s Murina_feae.MurFea_scaffold_17764                          37431 20 +     47283 tt--g-gg-aggatatcaggaa-----g------------a
i Murina_feae.MurFea_scaffold_17764                      I 5 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81540 20 -     86153 TT--A-AA-AGGCTATCGGGAA-----G------------G
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 5 C 0
s Mustela_putorius.JH418006.1                             14353923 20 +  14710649 TT--A-AG-AGTATATCAGGAA-----A------------T
i Mustela_putorius.JH418006.1                            I 5 C 0
s Myotis_brandtii.KE162005.1                               9791480 20 +  10118263 tt--g-gg-aggatatcaggaa-----a------------a
i Myotis_brandtii.KE162005.1                             I 5 C 0
s Myotis_davidii.KB100139.1                                4385841 20 +   6019432 TT--G-GG-AGGATATCAGGAA-----A------------A
i Myotis_davidii.KB100139.1                              I 5 C 0
s Myotis_lucifugus.GL429869.1                               381662 20 +   4330536 tt--g-gg-aggatatcaggaa-----a------------a
i Myotis_lucifugus.GL429869.1                            I 5 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          490 20 +     18357 TT--G-GG-AGGATATCAGGAA-----A------------A
i Myotis_myotis.MyoMyo_scaffold_66571                    I 5 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118365 20 +    130748 TT--G-GG-AGGTTATCTGAAA-----A------------G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 5 C 0
s Nannospalax_galili.KL204047.1                             944830  9 +   3037898 TT--A-AAG------------A-----T------------A
i Nannospalax_galili.KL204047.1                          I 5 I 9
s Nasalis_larvatus.k141_1350636                              27782 20 +     34575 TT--G-AG-AGGGTATCAAAAA-----C------------T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467886 20 -  31847680 tt--g-gg-agtatatcaggaa-----a------------g
i Neomonachus_schauinslandi.NINY01007730.1               I 5 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226045 20 -   7148211 tc--t-gg-aggatatcaggaa-----a------------g
i Neophocaena_asiaeorientalis.KZ687982.1                 I 4 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126342 20 -    149072 TT--G-GG-AGGATGTCAGGAA-----A------------G
i Noctilio_leporinus.NocLep_scaffold_7894                I 5 C 0
s Nomascus_annamensis.k141_1771965                           52517 20 -    132029 TT--G-AG-AGGATATGAAAAA-----C------------T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8612 20 -     16345 TT--G-AG-AGGATATGAAAAA-----C------------T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14497 20 +     22201 TT--G-AG-AGGATATGAAAAA-----C------------T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412718 20 -  22158432 TT--G-AG-AGGATATGAAAAA-----C------------T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24895 20 -     54323 TT--G-AG-AGGATATGAAAAA-----C------------T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197017 20 +   9404916 TT--G-GG-AGTATATCAGGAA-----A------------G
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 5 C 0
s Nycticebus_bengalensis.LG01                             93635039 20 + 196305487 CT--G-AG-GAGACATCAGGAG-----G------------G
i Nycticebus_bengalensis.LG01                            I 5 C 0
s Nycticebus_coucang.k141_3846325                             1797 20 -      3937 CT--G-AG-GAGACATCAGGAG-----G------------G
i Nycticebus_coucang.k141_3846325                        I 5 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563278 20 - 199412804 CT--G-AG-GAGACATCAGGAG-----G------------G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 5 C 0
s Ochotona_princeps.JH802162.1                             2549981 20 -   3988456 TT--G-AG-AGAATATTGGGAA-----A------------G
i Ochotona_princeps.JH802162.1                           I 5 C 0
s Octodon_degus.JH651603.1                                11046254 13 -  11899542 tt--g-ac-A------------GGCCAT------------T
i Octodon_degus.JH651603.1                               I 6 I 7
s Odobenus_rosmarus.KB229312.1                             1450483 20 +   2017862 tt--g-gg-agtatatcaggaa-----a------------g
i Odobenus_rosmarus.KB229312.1                           I 8 C 0
s Odocoileus_virginianus.KZ100018.1                         434933 20 -    630418 TT--T-GG-AGGTTATCAGGAA-----A------------G
i Odocoileus_virginianus.KZ100018.1                      I 4 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12925 20 +    150152 tt--t-gg-aggttatcaggaa-----a------------g
i Okapia_johnstoni.LVCL01S0005463.1                      I 4 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91496  9 -    140218 TT--G-AAG------------A-----T------------A
i Ondatra_zibethicus.OndZib_scaffold_7387                I 5 I 9
s Onychomys_torridus.OnyTor_scaffold_28377                    2355  9 -     41509 TT--G-AAG------------A-----T------------A
i Onychomys_torridus.OnyTor_scaffold_28377               I 5 I 9
s Orcinus_orca.KB316932.1                                  8095315 20 +  10937097 tc--t-gg-aggatatcaggaa-----a------------g
i Orcinus_orca.KB316932.1                                I 4 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12412 20 -     14239 TT--G-GG-AGGATATCAGGGA-----A------------T
i Orycteropus_afer.OryAfe_flattened_line_171931          I 5 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102453 20 - 174332312 tt--g-ag-aggatatcaggaa-----a------------g
i Oryctolagus_cuniculus.CM000791.1                       I 5 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38059 20 +    559221 TT--G-GG-AGTATATCAGGAT-----A------------G
i Otocyon_megalotis.JAEUCK010005147.1                    I 5 C 0
s Otolemur_crassicaudatus.k141_649260                        38437 20 -     51505 CT--G-AG-GAGATATCAGGAG-----G------------G
i Otolemur_crassicaudatus.k141_649260                    I 5 C 0
s Otolemur_garnettii.GL873799.1                             351440 20 +   1103335 CT--T-AG-GAGATATCAGGAG-----G------------G
i Otolemur_garnettii.GL873799.1                          I 5 C 0
s Ovis_aries.CM001607.2                                   26402914 20 -  44047080 TT--T-GG-ACGTTATCAGGAA-----A------------G
i Ovis_aries.CM001607.2                                  I 4 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3433 20 +     17875 TT--T-GG-ATGTTATCAGGAA-----A------------G
i Ovis_canadensis.OviCan_scaffold_67953                  I 4 C 0
s Pan_troglodytes.NBAG03003091.1                             11184 21 -     26668 tt--G-AG-AGGATATGAAAAA-----C-T----------T
i Pan_troglodytes.NBAG03003091.1                         I 526 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23230 20 -    230217 TT--G-GG-AGAATATCAGGAA-----A------------G
i Panthera_onca.PanOnc_flattened_line_3271               I 5 C 0
s Panthera_pardus.KV860321.1                              18460556 20 -  18783137 TT--G-GG-AGAATATCAGGAA-----A------------G
i Panthera_pardus.KV860321.1                             I 5 C 0
s Panthera_tigris.KE722367.1                               3971276 20 +   8748460 TT--G-GG-AGAATATCAGGAA-----A------------G
i Panthera_tigris.KE722367.1                             I 5 C 0
s Pantholops_hodgsonii.KE114653.1                          1614357 20 +   2937107 TT--T-GG-ACGTTATCAGGAA-----A------------G
i Pantholops_hodgsonii.KE114653.1                        I 4 C 0
s Papio_anubis.CM001495.2                                   241944 20 - 183742232 tt--g-ag-AGGATATCAAAAA-----C------------T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8408 20 +     21308 TT--G-AG-AGGATATCAAAAA-----C------------T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  290980 20 -  20919399 TT--G-AG-AGGATATCAAAAA-----C------------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21063 20 -     27687 TT--G-AG-AGGATATCAAAAA-----C------------T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14199 20 +     16796 TT--G-AG-AGGATATCAAAAA-----C------------T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21009 20 -     23640 TT--G-AG-AGGATATCAAAAA-----C------------T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13869 20 +     78924 TT--A-GA-AGAATATCACGAA-----A------------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 5 C 0
s Perodicticus_ibeanus.k141_1921260                          24722 20 +     31479 CT--G-GG-GAAATATCAGGAG-----G------------G
i Perodicticus_ibeanus.k141_1921260                      I 5 C 0
s Perodicticus_potto.k141_1854441                            17086 20 -     24908 CT--G-GG-GAGATATCAGGAG-----G------------G
i Perodicticus_potto.k141_1854441                        I 5 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         448 20 +      9367 TT--A-AG-------------A-----TATCAGGAAAGGAT
i Perognathus_longimembris.PerPac_flattened_line_89005   I 5 C 0
s Peromyscus_maniculatus.KI615324.1                         245580  9 +  18517816 tt--g-aag------------a-----t------------a
i Peromyscus_maniculatus.KI615324.1                      I 5 I 5
s Petromus_typicus.PetTyp_scaffold_17301                     30725 13 -     56120 TT--G-AC-A------------AGATAT------------A
i Petromus_typicus.PetTyp_scaffold_17301                 I 5 I 1
s Phocoena_phocoena.PhoPho_flattened_line_46867              11173 20 -     15039 TC--T-GG-AGGATATCAGGAA-----A------------G
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 4 C 0
s Piliocolobus_badius.k141_2704958                            1230 20 +     55023 TT--G-AG-AGGGTATCAAAAA-----C------------T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          781 20 -     89929 TT--G-AG-AGGGTATCAAAAA-----C------------T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1369 20 +     40849 TT--G-AG-AGGGTATCAAAAA-----C------------T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253036 20 +  14605196 tt--g-AG-AGGGTATCAAAAA-----C------------T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1611 20 +     22231 TT--G-GA-AGGATAGCAGGAA-----A------------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 5 C 0
s Pithecia_albicans.k141_1239476                             63677 20 +    207309 TT--G-AG-AGGATATCAAAGA-----C------------T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4771 20 -     25401 TT--G-AG-AGGATATCAAAGA-----C------------T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30512 20 +     58159 TT--G-AG-AGGATATCAAAGA-----C------------T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30788 20 +     63561 TT--G-AG-AGGATATCAAAGA-----C------------T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30551 20 +     51148 TT--G-AG-AGGATATCAAAGA-----C------------T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555518 20 -   4542175 TT--G-AG-AGGATATCAAAGA-----C------------T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30535 20 +     51125 TT--G-AG-AGGATATCAAAGA-----C------------T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3257 20 -      8168 TC--T-TT-AGGCTATCAGAAA-----A------------G
i Platanista_gangetica.PlaMin_flattened_line_167872      I 4 C 0
s Plecturocebus_bernhardi.k141_2549090                        6939 20 +     39866 TT--G-AG-AGGATCTCGAAGA-----C------------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2024 20 -      9282 TT--G-AG-AGGATCTCGAAGA-----C------------T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41428 20 -     87950 TT--G-AG-AGGATCTCGAAGA-----C------------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41821 20 -     88961 TT--G-AG-AGGATCTCGAAGA-----C------------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6520 20 -     39403 TT--G-AG-AGGATCTCGAAGA-----C------------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41472 20 +     87928 TT--G-AG-AGGATCTCGAAGA-----C------------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6517 20 -     60166 TT--G-AG-AGGATCTCGAAGA-----C------------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13453 20 -     67232 TT--G-AG-AGGATCTCGAAGA-----C------------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41369 20 -     90634 TT--G-AG-AGGATCTCGAAGA-----C------------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42837 20 +     89403 TT--G-AG-AGGATCTCGAAGA-----C------------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176737 20 - 189387572 tt--g-ag-aGGATATGAAAAA-----C------------T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191554 20 -   9816681 TT--G-AG-AGGATATGAAAAA-----C------------T
i Pongo_pygmaeus.ctg66                                   I 5 C 0
s Presbytis_comata.k141_1230337                              26366 20 +     69807 TT--G-AG-AGGGTATCAAAAA-----C------------T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43560 19 -     80239 TT--G-AG-AGGGTATCAAAAA-----C-------------
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981389 19 +   4620579 TT--G-AG-AGGATATCAGGA------A------------G
i Prolemur_simus.MPIZ01000396.1                          I 5 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564855 19 -   2598838 TT--G-AG-AGGGTATCAGGA------A------------G
i Propithecus_coquerelli.NW_012148875.1                  I 5 C 0
s Propithecus_coronatus.k141_209299                           2491 19 -      7103 TT--G-AG-AGGGTATCAGGA------A------------G
i Propithecus_coronatus.k141_209299                      I 5 C 0
s Propithecus_diadema.k141_153680                             3088 19 -     11706 TT--G-AG-AGGATATCAGGA------A------------G
i Propithecus_diadema.k141_153680                        I 5 C 0
s Propithecus_edwardsi.k141_635656                            6824 19 -     30655 TT--G-AG-AGGATATCAGGA------A------------G
i Propithecus_edwardsi.k141_635656                       I 5 C 0
s Propithecus_perrieri.k141_1496898                          33149 19 +     46564 TT--G-AG-AGGATATCAGGA------A------------G
i Propithecus_perrieri.k141_1496898                      I 5 C 0
s Propithecus_tattersalli.k141_1127767                       93420 19 -     98465 TT--G-AG-AGGGTATCAGGA------A------------G
i Propithecus_tattersalli.k141_1127767                   I 5 C 0
s Propithecus_verreauxi.k141_1047036                          7057 19 +     35169 TT--G-AG-AGGGTATCAGGA------A------------G
i Propithecus_verreauxi.k141_1047036                     I 5 C 0
s Pteronotus_parnellii.KE847780.1                            50438 20 -     66298 TT--G-TG-AGGATATTAGGAA-----C------------G
i Pteronotus_parnellii.KE847780.1                        I 5 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3490 20 -     18639 TT--A-AG-AGTATATCAGGAA-----A------------T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 5 C 0
s Pteropus_alecto.KB030862.1                               5839693 20 -  28871421 GT--G-GG-AGGATATCAGGAA-----A------------G
i Pteropus_alecto.KB030862.1                             I 5 C 0
s Pteropus_vampyrus.KN525825.1                             3536202 20 -   4952924 GT--G-GG-AGGATATCAGGAA-----A------------G
i Pteropus_vampyrus.KN525825.1                           I 5 C 0
s Puma_concolor.QAVW01001104.1                            18097870 20 +  38429054 TT--G-GG-AGAATATCAGGAA-----A------------G
i Puma_concolor.QAVW01001104.1                           I 5 C 0
s Pygathrix_cinerea.k141_1153803                             25740 20 +     91421 TT--G-AG-AGGGTATCAAAAA-----C------------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152233 20 -   7812017 TT--G-AG-AGGGTATCAAAAA-----C------------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6610 20 +     72585 TT--G-AG-AGGGTATCAAAAA-----C------------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51854 20 +     55069 TT--T-GG-AGGTTATCAGGAA-----A------------G
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 4 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913580 20 +   3329780 tt--g-gg-aggatatcaggaa-----a------------a
i Rhinolophus_sinicus.LVEH01000134.1                     I 5 C 0
s Rhinopithecus_bieti.k119_778604                              310 20 +      7119 TT--G-AG-AGGGTATCAAAAA-----C------------T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120920 20 + 195417433 tt--g-ag-aGGGTATCAAAAA-----C------------T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235161 20 -   7961872 TT--G-AG-AGGGTATCAAAAA-----C------------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73615 20 -    116970 AT--G-GG-AGGATATCAAGAA-----A------------G
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 5 C 0
s Saguinus_bicolor.k141_1429097                               2815 20 +     27962 TT--G-AG-AGGATATAAAAAA-----C------------T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2710 20 +      6077 TT--G-AG-AGGATATAAAAAA-----C------------T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2801 20 +      5971 TT--G-AG-AGGATATAAAAAA-----C------------T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2741 20 +      5932 TT--G-AG-AGGATATAAAAAA-----C------------T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1066 20 -      4390 TT--G-AG-AGGATATAAAAAA-----C------------T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390499 20 - 209938924 TT--G-AG-AGGATATAAAAAA-----C------------T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2691 20 +      5979 TT--G-AG-AGGATATAAAAAA-----C------------T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3433 20 -      4301 TT--G-AG-AGGATATAAAAAA-----C------------T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6507 20 +     16473 TT--T-GG-ACGTTATCAGGAA-----A------------G
i Saiga_tatarica.SaiTat_scaffold_39512                   I 4 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107837 20 + 121099817 TT--G-AG-AGGATATCAAAGA-----C------------T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29399 20 -     47369 TT--G-AG-AGGATATCAAAGA-----C------------T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29788 20 -     79414 TT--G-AG-AGGATATCAAAGA-----C------------T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26480 20 -     34454 TT--G-AG-AGGATATCAAAGA-----C------------T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13886 20 -     22428 TT--G-AG-AGGATATCAAAGA-----C------------T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29031 20 -     47109 TT--G-AG-AGGATATCAAAGA-----C------------T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237100 18 +   5703754 TT--G-AG-AGGATATCAGA-------C------------T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6690 18 +     21866 TT--G-AG-AGGATATCAGA-------C------------T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114798 20 +    313613 TT--G-GG-AACATAATAGGAA-----A------------G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 5 C 0
s Semnopithecus_entellus.k141_158471                         24053 20 +     27374 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27571 20 +     58920 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14067 20 -     45317 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21726 20 -     42441 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24406 20 -     29113 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27475 20 -     48123 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    47796  9 +     77746 TT--G-AAG------------T-----T------------A
i Sigmodon_hispidus.SigHis_scaffold_20193                I 5 I 197
s Solenodon_paradoxus.SolPar_flattened_line_126            1857116 21 -   1910179 TT--TGGG-AGGATATCAGGAA-----A------------G
i Solenodon_paradoxus.SolPar_flattened_line_126          I 5 C 0
s Spermophilus_dauricus.KZ294078.1                         1867109 20 +   3870691 tt--a-ag-agGATACAAGGAA-----A------------G
i Spermophilus_dauricus.KZ294078.1                       I 5 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5257 20 -     97271 TT--A-GG-AGTATATCAGGAA-----A------------T
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123704 20 +    196729 TT--G-GG-ATAATGTCAGGAA-----A------------G
i Suricata_suricatta.SurSur_flattened_line_6629          I 5 C 0
s Sus_scrofa.CM000828.4                                    6639926 20 +  69701581 TT--G-GG-AGGATATCAGGAA-----A------------A
i Sus_scrofa.CM000828.4                                  I 5 C 0
s Symphalangus_syndactylus.tarseq_199                       389979 20 +   1523678 TT--G-AG-AGGATATGAAAAA-----C------------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12418 20 +     22964 TT--G-GG-ACAGTATCAGGAA-----A------------G
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 4 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1481 20 +      5583 TT--G-GG-AGGTTATCTGGAA-----A------------G
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 5 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190394 20 +    199430 tt--g-gg-aggatctcaggaa-----a------------g
i Tapirus_indicus.TapInd_scaffold_7432                   I 5 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104346 20 -    539355 tt--g-gg-aggatctcaggaa-----a------------g
i Tapirus_terrestris.TapTer_scaffold_755                 I 5 C 0
s Tarsius_lariang.k141_1780720                                5689 20 +      6850 TC--C-AG-TGGATATCAGGAA-----A------------G
i Tarsius_lariang.k141_1780720                           I 5 C 0
s Tarsius_wallacei.k141_226975                                5740 20 +     20590 TC--C-AG-TGGATATCAGGAA-----A------------G
i Tarsius_wallacei.k141_226975                           I 5 C 0
s Theropithecus_gelada.CM009954.1                           351932 20 - 186847797 tt--g-ag-aGGATATCAAAAA-----C------------T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23053 12 -     33621 TT--G-AC-A------------AG-TAT------------A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 5 I 1
s Tolypeutes_matacus.TolMat_scaffold_31955                   18615 20 -     31044 TT--G-GG-AAGATATCTGGAA-----A------------G
i Tolypeutes_matacus.TolMat_scaffold_31955               I 5 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478462 20 -    610378 tt--g-gg-agcatatcaggaa-----a------------g
i Tonatia_saurophila.TonSau_scaffold_294                 I 5 C 0
s Trachypithecus_auratus.k141_1189070                        19612 20 +     26378 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32281 20 -     78344 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18933 20 +     25722 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27232 20 -     62838 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27279 20 +     46913 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8086 20 -     28527 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29171 20 -     64340 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27208 20 -     63452 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8651 20 +     22490 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2079 20 -      6147 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         8983 20 -     13050 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254223 20 -   6242583 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         248 20 +     19340 TT--G-AG-AGGGTATCAGAAA-----C------------T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172124 20 -    200418 TT--T-GG-AGGATATCAGGCA-----A------------G
i Tragulus_javanicus.TraJav_scaffold_3462                I 4 C 0
s Trichechus_manatus.JH594705.1                            6479230 20 -  10818551 tt--g-gg-agggtatcaggga-----a------------t
i Trichechus_manatus.JH594705.1                          I 5 C 0
s Tupaia_chinensis.KB320699.1                              1832651 12 -   4065304 ------------ACATTAGGAA-----A------------G
i Tupaia_chinensis.KB320699.1                            I 8 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6967 12 -     70247 ------------ATATTAGGAA-----A------------G
i Tupaia_tana.TupTan_flattened_line_394                  I 8 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360054 20 -  33153633 tc--t-gg-aggatatcaggaa-----a------------g
i Tursiops_truncatus.MRVK01000835.1                      I 4 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     998 20 -     21056 TT--C-GG-AGGATAATAGGAA-----A------------G
i Uropsilus_gracilis.UroGra_scaffold_46687               I 5 C 0
s Ursus_maritimus.KK499267.1                                180642 20 +   5085361 TT--G-GG-AATATATCAGGAA-----A------------G
i Ursus_maritimus.KK499267.1                             I 5 C 0
s Varecia_rubra.k141_787544                                  24033 19 -     30710 TT--G-TG-AGAATATCAGGA------A------------G
i Varecia_rubra.k141_787544                              I 5 C 0
s Varecia_variegata.k141_289850                              22940 19 -    147434 TT--G-TG-AGAATATCAGGA------A------------G
i Varecia_variegata.k141_289850                          I 5 C 0
s Vicugna_pacos.KN270157.1                                   75137 20 +   5488506 TT--G-GG-AGGATATCAGGAA-----A------------G
i Vicugna_pacos.KN270157.1                               I 5 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103781 20 -    112863 TT--G-GG-AGTATATCAGGAA-----A------------G
i Vulpes_lagopus.VulLag_flattened_line_12041             I 5 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172887 20 -    224448 TT--A-AG-AGGATACCAGGAA-----A------------G
i Xerus_inauris.XerIna_scaffold_2302                     I 5 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27681 20 -     86975 tt--g-gg-agtatatcaggaa-----a------------g
i Zalophus_californianus.ZalCal_flattened_line_17732     I 5 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2170  8 +      2695 TA--G-AA-------------A-----G------------A
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 22 I 9
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Rattus_norvegicus.chr16                                 37021351  0 -  90668790 C
e Psammomys_obesus.NESX01036366.1                            35454  0 +     52041 C
e Mus_spretus.CM004101.1                                  39495426  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58215994  0 +  89631738 C
e Mus_musculus.chr8                                       41686106  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35591747  0 + 120012414 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 47881  0 -    140813 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751  0 -    498745 C
e Equus_caballus.CM000403.2                               21373965  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041  0 -   4378816 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     18763  0 +     63021 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4280 22 +     36723 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATAA---TT
s Acinonyx_jubatus.LLWD01001279.1                           811629 22 +   1699592 G--TT-CC--CC-A----CA---AGC-----------A-------------------------GTATTA---TT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414156 22 +  29979442 a---ttcc--cc-g----ga---aga-----------g-------------------------gtatta---tt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214254 21 +    347723 A--TT-C---CC-A----GT---AGA-----------G-------------------------GTATTA---TT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16756 25 -     61208 TTC-----CCCT-T----GA---GGAGATATTATTTGC------------------------------------
i Allactaga_bullata.AllBul_scaffold_20030                I 9 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46603 22 +     53615 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42548 22 +     44087 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15185 22 -     21945 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16858 22 +     32033 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71004 22 -     84148 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43237 22 -     78289 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42683 22 +     55831 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41124 22 -     64179 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22771 22 -     24835 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39754 22 +     45454 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45452 22 +     70886 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7577 22 +     30854 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31716 22 +     42133 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1583995 22 +   2318259 A--TTTC---CC-A----GA---AGA-----------G-------------------------GTATTG---TT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175445 22 -    412891 g---ttcc--cc-t----ga---aga-----------g-------------------------gtatta---tt
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49095 22 -     68529 A--TT-CC--CC-A----GA---AGA-----------G-------------------------GTATTG---TT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   49506 22 -     65372 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43260 22 +     43593 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671273 22 +   5030052 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22915 22 -     23494 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                8051 22 +      8415 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14800 12 -     32367 GTC-----CCCA-A----GA---AC-------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 7
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3737 22 -     15198 g---ttcc--ct-g----ga---aga-----------g-------------------------gtagca---tt
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273516 22 +  21539123 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9682 22 +     48076 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4819 22 -     28759 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32373 22 +     44353 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47743 22 -     71267 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21803 22 -     33135 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  4990 22 +     11645 GTT-----CCCC-A----AC---AGT-----------A-------------------------GCAATA---TT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               4996 22 -     19611 GTT-----CCCC-A----AC---AGT-----------A-------------------------GCAATA---TT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955824 22 -  23207421 G--TT-CC--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3033 22 -      4711 G--TT-CC--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     84991 22 +    124022 A--TTTC---CC-A----GA---AGA-----------G-------------------------GTATTG---TT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20524 22 +    288883 A--TTTC---CC-A----AA---AGA-----------G-------------------------GTATTG---TT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354911 22 +  48749331 A--TTTC---CC-A----AA---AGA-----------G-------------------------GTATTG---TT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753479 22 +   1948126 A--TTTC---CC-A----AA---AGA-----------G-------------------------GTATTG---TT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543618 22 -  45695690 A--TTTC---CC-A----AA---AGA-----------G-------------------------GTATTG---TT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528642 22 -   4408762 A--TTTC---CC-A----GA---AGA-----------G-------------------------GTATTG---TT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6710 22 +     28062 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCGTTA---TT
i Cacajao_ayresi.k141_96119                              C 0 I 10
s Cacajao_calvus.k141_89051                                  42004 22 -     91139 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCGTTA---TT
i Cacajao_calvus.k141_89051                              C 0 I 10
s Cacajao_hosomi.k141_81245                                  19530 22 +     95584 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCGTTA---TT
i Cacajao_hosomi.k141_81245                              C 0 I 10
s Cacajao_melanocephalus.k141_619699                         19443 22 +    119600 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCGTTA---TT
i Cacajao_melanocephalus.k141_619699                     C 0 I 10
s Callibella_humilis.k141_1233062                             8989 22 +     18648 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATCA---TT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8527 22 -     13885 GCT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             595 22 -      8861 GTT-----CCCT-A----GA---GGT-----------G-------------------------GCATTA---TT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165452988 22 + 189096842 GTT-----CTCT-A----GA---GGT-----------G-------------------------GCATTA---TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                511 22 +      8664 GTT-----CCCT-A----GA---GGT-----------G-------------------------GCATTA---TT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629819 11 +  17673402 A--TT-CC--TC-A----GA---A--------------------------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 I 8
s Camelus_dromedarius.KN272107.1                           4664105 11 +   7040546 A--TT-CC--TC-A----GA---A--------------------------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 8
s Camelus_ferus.KB017975.1                                 1207765 11 +   1652518 A--TT-CC--TC-A----GA---A--------------------------------------------------
i Camelus_ferus.KB017975.1                               C 0 I 8
s CanFam4.chr16                                           42504171 22 +  60362399 A--TT-CT--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7807 22 -     23171 A--TT-CT--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221150 22 +   9314153 A--TT-CT--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614285 22 +  59632846 A--TT-CT--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105866 22 -  63665305 A--TT-CT--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407707 22 -  46296322 A--TTTC---CC-A----GA---AGA-----------G-------------------------GCATTG---TT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26589980 22 +  44709034 A--TTTC---CC-A----GA---AGA-----------G-------------------------GCATTG---TT
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269083 22 +    496798 TCT-----CCCC-A----GA---GGT-----------G-------------------------GCATTG---TT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               4026 22 +      5315 G--TT-CC--CT-G----GA---AGA-----------G-------------------------GCAGTA---TT
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75485 22 -    217609 G--TT-CC--CC-A----GT---ACA-----------G-------------------------GTATTT---TT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994747 14 +  23392119 GTT-----TCCT-A----GA---GGA-----------G------------------------------------
i Cavia_aperea.AVPZ01000300.1                            I 5 C 0
s Cavia_porcellus.DS562891.1                               4998189 14 +  23407841 GTT-----TCCT-A----GA---GGA-----------G------------------------------------
i Cavia_porcellus.DS562891.1                             I 5 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61290 14 -     66877 GTT-----TCCT-A----GA---GGA-----------G------------------------------------
i Cavia_tschudii.CavTsc_scaffold_23560                   I 5 C 0
s Cebuella_niveiventris.k141_592277                           3908 22 -     12580 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATCA---TT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41963 22 +     53515 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATCA---TT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369901 22 -  26074798 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6790 22 -     34880 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65885 22 -     89041 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1014 22 -      5494 TCT-----CCCC-A----GA---GGT-----------G-------------------------GCATTG---TT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490962 22 -  27778364 A--TT-CC--CC-A----GA---AGG-----------G-------------------------GTATGA---TT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17795 22 +     27315 A--TT-CC--CC-A----GA---AGG-----------G-------------------------GTATGA---TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139779 22 -   4669795 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43520 22 +     47900 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43352 22 -     44860 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43335 22 -    148725 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25558 22 -     40656 GTT-----CCCC-A----GA---GGT-----------G-------------------------TCATTA---TT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5527 22 +     20796 GTT-----CCCC-A----GA---GGT-----------G-------------------------TCATTA---TT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10597 22 -     17524 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26318 22 -     34525 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10148 22 -     25376 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362742 22 -  39242232 GTT-----CCCC-A----GA---GGT-----------G-------------------------TCATTA---TT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268455 22 +  21565898 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30794 21 -     45857 GTT------CCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25731 22 -     32606 GTT-----CCCC-A----GA---GGT-----------G-------------------------TCATTA---TT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1888 22 +      8499 GTT-----CCCC-A----GA---GGT-----------G-------------------------TCATTA---TT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24289 22 +     70610 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21212 22 +     36323 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11599 22 -     19938 GCT-----TCTC-A----GG---GGA-----------G-------------------------GCATTG---TT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29408 22 -     33796 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3925 22 -     15404 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7791 22 -     32913 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCGTTA---TT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18204 22 -     40346 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCGTTA---TT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18459 22 +    216457 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCGTTA---TT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18252 22 +     39636 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCGTTA---TT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2837 22 +      5346 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41338 22 -    112038 GTT-----CCCC-A----GG---GGC-----------G-------------------------GCGTTA---TT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6910 22 +     34062 GTT-----CCCC-A----GG---GGC-----------G-------------------------GCGTTA---TT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342107 22 +  18827391 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8653 22 -     44032 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303432 22 - 135778131 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10652 22 +     15858 GCT-----ACCC-A----GC---GGA-----------G-------------------------GCATTA---TT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            602228 22 -    839153 GCT-----ACCC-A----GC---GGA-----------G-------------------------GCATTA---TT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407878 22 -   2368649 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377755 22 - 200372422 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1302 22 -     84244 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806028 21 +  53390261 G--T-GC---CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1598 26 -      8242 T--TT-CC--TC-ACAAGGA---AGG-----------G-------------------------GTATTA---TT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41020 26 -     83289 ATG---C-TTCC-A----GA---GAAGGCATTATTTAG------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             I 9 C 0
s Cricetulus_griseus.LT883664.1                          213113469 26 - 224834208 ATT---C-CTCC-A----AA---GGAGGCATTCTTTAG------------------------------------
i Cricetulus_griseus.LT883664.1                          I 9 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3082 22 +     87169 T--TT-CC--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643548 14 -   1526836 GTT-----ATAT-A----GA---AAA-----------T------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3768 14 +     50838 GTT-----TCCC-A----GA---GGA-----------G------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 7 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2667 14 +     36344 GTC-----TCCC-A----GA---GGA-----------G------------------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              I 7 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26437 14 +     75252 GTC-----TCCC-A----GA---GGA-----------G------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 7 C 0
s Dasypus_novemcinctus.JH564415.1                          2108942 22 -   2246927 GCT-----ACTC-A----GT---GGA-----------G-------------------------GCATTG---TT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291362 22 +  12879189 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCAGTA---TC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624153 22 -  35494412 g---ttcc--cc-a----ga---aga-----------g-------------------------gtatta---tt
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863475 22 -  20541912 g---atcc--cc-t----ga---aga-----------g-------------------------gtatta---tt
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663253 22 -   1390856 A--TT-CC--CC-A----GA---CGG-----------G-------------------------GTATGA---TT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138039 22 -    198055 A--TT-CC--CC-A----GA---AGG-----------G-------------------------GTATGA---TT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97243 14 -    115145 GTC-----TCCC-A----GA---GGA-----------G------------------------------------
i Dinomys_branickii.DinBra_scaffold_10381                I 7 C 0
s Dipodomys_ordii.KN672350.1                              18949103 13 -  37912305 -TC-----AGCT-A----GA---GGA-----------G------------------------------------
i Dipodomys_ordii.KN672350.1                             C 0 I 11
s Dipodomys_stephensi.DipSte_scaffold_89095                   4050 13 -     10735 -TC-----AGCT-A----GA---GGA-----------G------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 11
s Dolichotis_patagonum.DolPat_scaffold_80628                  8712 14 +     14636 GTC-----TCCC-A----GA---GGA-----------G------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             I 7 C 0
s Echinops_telfairi.JH980293.1                            62853077 40 - 111700974 GTT-----TTCC-A----GA---GGA-----------GATGTTATTTGAAGGTTACATTGCATG----------
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5063 22 +     19438 G--TT-CC--TC-C----AA---AGT-----------G-------------------------ATATTG---TT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238382 22 -    607251 A--TT-CC--CC-A----GA---AGA-----------G-------------------------GTATTG---TT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107126 14 -  10337057 GCT-----T-CT-T----GA---GGA-----------G-------------------------G----------
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29743 26 +    110024 ATT---C-CTCC-A----AA---GGAGGCATTATTTAG------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 9 C 0
s Ellobius_talpinus.LOJH01026522.1                           11718 26 +     18970 ATT---C-CTCC-A----AA---GGAGGCATTATTTAG------------------------------------
i Ellobius_talpinus.LOJH01026522.1                       I 9 C 0
s Enhydra_lutris.KZ291758.1                               24914908 21 +  41312741 A--TT-C---CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577104 22 +  14770903 c---ttcc--cc-a----ga---aga-----------g-------------------------gtacta---tt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                               261633 22 +  21539334 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63703 22 -    133382 g---ttcc--cc-a----ga---aga-----------g-------------------------gtatta---tt
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3920 22 +      7672 G--TT-CC--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13534 22 -     24895 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41243 22 -     70999 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85205 22 +    112731 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41778 22 +     68309 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52100 22 -     65740 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22733 22 -     75513 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46926 22 -     97555 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3651 22 +     30972 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41373 22 -     52037 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57777 22 -    111500 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245542 22 - 206538554 G--TT-CC--CC-A----CA---AGC-----------A-------------------------GTATTA---TT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115327 22 - 205367284 G--TT-CC--CC-G----CA---AGC-----------A-------------------------GTATTA---TT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26429 22 -     30238 G--TT-CC--CC-A----CA---AGC-----------A-------------------------GTATTA---TT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123304 21 -    137831 GGA-----CTCCTG----GA---CTT-----------G-------------------------GCAGTA-----
i Galago_moholi.ctg3793                                  C 0 I 1
s Galago_senegalensis.k141_991736                             6849 21 +     22493 GGA-----CCCCTG----GA---CTT-----------G-------------------------GCAGTA-----
i Galago_senegalensis.k141_991736                        C 0 I 1
s Galagoides_demidoff.k141_561628                            18900 21 -     32986 GGA-----CCCCTG----GA---GAT-----------G-------------------------GCAGTA-----
i Galagoides_demidoff.k141_561628                        C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_74466               17851 22 +     18121 ATT-----CCAC-A----GA---GAA-----------G-------------------------GCATTC---TC
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90061 22 -     95226 A--CT-CC--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32977 22 -     36801 GTC-----CCCC-A----GA---GAA-----------G-------------------------GTGTTA---TT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4597 22 -      8343 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATAA---TT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253608 22 - 186649187 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATAA---TT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     475 22 -     78134 GTC-----CCCG-A----GA---GGA-----------G-------------------------GTACTA---TT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13460 22 -     40692 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34862 22 +     49394 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59731 22 -     66874 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8604 22 -     42923 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15604 22 -     53142 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29564 25 -    327341 C--T-CCC--CC-A----GAAGAAGA-----------G-------------------------GTATGA---TT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7814 22 +     48891 A--TTTC---CC-A----GA---AGA-----------G-------------------------GTATTG---TT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6417 21 -     36432 G--TT-CC--CC-A----G----AGA-----------G-------------------------GTATTA---TT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49583 22 +     49977 G--TT-CC--TC-A----GA---AGA-----------G-------------------------GTGTTA---TT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141615 22 -    630532 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68486 22 +     83186 G--TT-CC--CC-A----GA---AGA-----------G-------------------------ATATTA---TT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70140 14 +    143317 CTC-----TCCC-A----AA---GGA-----------G------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 7 C 0
s Hylobates_agilis.k141_1155965                               4645 22 +     12352 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11829 22 +     55766 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051427 22 + 191637585 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800305 22 +  11177569 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385550 22 +   7955117 GTC-----CCCC-A----GA---GGA-----------G-------------------------GCATTA---TT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1113 22 +     11955 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1940 22 -     16823 G--TT-CC--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237940 25 +   9596543 GTC-----CCCT-T----GA---GGAGATATTATTTGT------------------------------------
i Jaculus_jaculus.JH725527.1                             I 9 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64426 20 -     97402 G--TT-C---CC-A----GC---AGA-----------C-------------------------GTGTTA---T-
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42058 22 +    110728 GTT-----CTCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    60973 17 -     65777 C----------C-G----GA---AGA-----------G-------------------------GTACTA---TT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 36
s Lemur_catta.scaffold_24                                 14758253 22 +  30322482 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2973 22 -     13097 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2728 22 +      5940 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2558 22 -      5717 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8925 22 -     11567 GTT-----CCCC-A----GA---GGT-----------G-------------------------GGATTA---TT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10306 22 -     12945 GTT-----CCCC-A----GA---GGT-----------G-------------------------GGATTA---TT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7782 22 +     29618 GGT-----CCCC-A----GC---AGG-----------A-------------------------GCAATA---TT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7778 22 +     31569 GGT-----CCCC-A----GC---AGG-----------A-------------------------GCAATA---TT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7790 22 +     24756 GGT-----CCCC-A----GC---AGG-----------A-------------------------GCAATA---TT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7788 22 +     16388 GGT-----CCCC-A----GC---AGG-----------A-------------------------GCAATA---TT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812303 22 -   3914936 a---ttcc--cc-a----ga---aga-----------g-------------------------gtatta---tt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16636 22 +     24238 GCT-----TCCC-A----GG---GGA-----------A-------------------------GCATTA---TT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333460 22 +    662738 G--TT-CC--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               331737 22 -   1826925 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9061 21 +     19643 GGA-----CCCCTA----AA---GAT-----------G-------------------------GCAGTT-----
i Loris_lydekkerianus.k141_2031736                       C 0 I 1
s Loris_tardigradus.ctg83                                  5042722 21 -   6120653 GGA-----CCCCTA----AA---GAT-----------G-------------------------GCAGTT-----
i Loris_tardigradus.ctg83                                C 0 I 1
s Loxodonta_africana.GL010049.1                           39079801 22 +  43346337 gct-----tccc-a----ga---gga-----------g-------------------------gtgtgg---tt
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613440 22 +  59628241 A--TT-CT--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44054 22 -     61512 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371714 22 -  60120075 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23967 22 +     30207 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21070 22 -     24934 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23920 22 +     30527 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35110 22 -     50087 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44881 22 +     51645 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414050 22 - 187317192 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398273 22 +  25927173 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47437 22 -     62418 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                24093 22 +     24253 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43912 22 +     59329 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269840 22 +    668171 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                   95 22 +      1732 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Macaca_thibetana.k99_503078                            N 0 C 0
s Macaca_tonkeana.k141_339739                                 1624 22 +     17132 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222026 22 -    270270 C--TT-CC--TC-C----GA---AGT-----------G-------------------------ATATTA---TT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321124 22 +  24302211 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355956 22 -    752769 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672341 17 -    737560 A--T--C---CC-T----GA---AGA-----------G-------------------------GTA------TT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219628 17 +    317179 A--T--C---CC-T----GC---AGA-----------G-------------------------ATA------TT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499771 22 +  40650429 GTC-----CCCC-G----GA---GGA-----------G-------------------------GCATTA---TT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149182 22 +    207569 T--TTTC---TC-A----GA---AGA-----------G-------------------------TTATTA---TT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24796 22 -     74585 A--T-CCC--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428019 26 +  29670104 ATT---C-CTCC-A----GA---GGAGGCATTCTTTAG------------------------------------
i Mesocricetus_auratus.KB708134.1                        I 9 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80006 22 +     93471 g---ttcc--cc-a----ga---aga-----------g-------------------------gtatta---tt
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9099 22 +     17804 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCTTCA---TT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9601 22 -     12984 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATCA---TT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17915 22 -     26561 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATCA---TT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983394 22 +  93316391 GTT-----CCCT-A----GC---AGT-----------A-------------------------GCAATA---TT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44172 40 +    145209 GCT-----TTCC-A----GA---GGA-----------GGTGTTACTTGAAGGTTACATTGCATG----------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183416 22 +    200668 G--TT-CT--CC-T----GA---AGA-----------G-------------------------GTATTA---TT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961155 26 +  27267610 ATT---C-CTCC-A----AA---GGAGGCATTTTTTAG------------------------------------
i Microtus_ochrogaster.CM001695.1                        I 9 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361514 22 -   8254450 T--TT-CC--CC-G----CA---GGA-----------G-------------------------GTATTA---TT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40415 22 -     48117 T--TT-CC--CC-G----CA---GGA-----------G-------------------------GTATTA---TT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21136 22 -     27822 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7310 22 +     27589 a---ttcc--cc-a----ga---aga-----------g-------------------------gtatta---tt
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51185 22 -     62432 GTT-----CCCT-A----GC---AGT-----------A-------------------------GCAATA---TT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351896 22 +    437263 g---ttcc--cc-a----ga---aga-----------g-------------------------gtatta---tt
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177576 22 +    366855 G--TT-CC--CC-A----GA---AGA-----------G-------------------------GGAGTA---TT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23110 22 -     82753 A--CT-CC--CC-A----GA---AGA-----------G-------------------------GTATTG---TT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17317 25 -     63510 C--TT-CC--CC-A----GAAGAAGA-----------G-------------------------GTATTA---TT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37451 22 +     47283 c---ttca--cc-a----ga---aga-----------g-------------------------gtacta---tt
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81560 21 -     86153 GTC-----C-CC-A----GA---GAA-----------G-------------------------GTATTA---TT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353943 22 +  14710649 A--TT-CC--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791500 22 +  10118263 c---ttcc--cc-a----ga---aga-----------g-------------------------gtacta---tt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385861 22 +   6019432 C--TT-CC--CC-A----GA---AGA-----------A-------------------------GTACTA---TT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381682 22 +   4330536 c---ttcc--cc-a----ga---aga-----------g-------------------------gtacta---tt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          510 22 +     18357 C--TT-CC--CC-A----GA---AGA-----------A-------------------------GTACTA---TT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118385 22 +    130748 GCT-----ACCC-A----GT---GGA-----------G-------------------------GCATTA---TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             944848 23 +   3037898 AGC-------CC-A----GA---GGAGACATTatttag------------------------------------
i Nannospalax_galili.KL204047.1                          I 9 C 0
s Nasalis_larvatus.k141_1350636                              27802 22 +     34575 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467906 22 -  31847680 a---ttcc--cc-a----ga---aga-----------g-------------------------gtatta---tt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226065 22 -   7148211 g---ttcc--cc-a----ga---aga-----------g-------------------------gtatta---tt
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126362 23 -    149072 G--TTTCC--CA-A----GA---TGC-----------G-------------------------GTGTCA---TT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52537 22 -    132029 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8632 22 -     16345 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14517 22 +     22201 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412738 22 -  22158432 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24915 22 -     54323 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197037 22 +   9404916 A--TT-CT--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635059 21 + 196305487 GGA-----CCCCTG----GA---GAT-----------G-------------------------GCAGTT-----
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_3846325                             1817 21 -      3937 GGA-----CCCCTG----GA---GAT-----------G-------------------------GCAGTT-----
i Nycticebus_coucang.k141_3846325                        C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563298 21 - 199412804 GGA-----CCCCTG----GA---GAT-----------G-------------------------GCAGTT-----
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Ochotona_princeps.JH802162.1                             2550001 22 -   3988456 GTT-----TCCC-A----GG---GGC-----------A-------------------------GCATTG---TT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11046274 14 -  11899542 GTT-----TCCC-A----GA---GGA-----------G------------------------------------
i Octodon_degus.JH651603.1                               I 7 C 0
s Odobenus_rosmarus.KB229312.1                             1450503 22 +   2017862 a---ttcc--cc-a----ga---aga-----------g-------------------------gtatta---tt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434953 22 -    630418 A--TT-CC--CC-A----GA---AGA-----------G-------------------------GTATTG---TT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12945 22 +    150152 a---ctcc--cc-a----ga---aga-----------g-------------------------gtatta---tt
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91514 26 -    140218 ATT---C-CTCC-A----AT---GGAGGCATTATTTAG------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                I 9 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2373 26 -     41509 ATT---C-CTCC-A----GA---GGAGGCATTATTTAG------------------------------------
i Onychomys_torridus.OnyTor_scaffold_28377               I 9 C 0
s Orcinus_orca.KB316932.1                                  8095335 22 +  10937097 g---ttcc--cc-a----ga---aga-----------g-------------------------gtatta---tt
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12432 15 -     14239 ACG-----TCCC-A----GA---GGA-----------G-------------------------G----------
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102473 22 - 174332312 gct-----tccc-a----gg---gga-----------a-------------------------gcatta---tt
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38079 22 +    559221 A--TT-CT--CC-C----GA---AGA-----------G-------------------------GTATTA---TT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38457 21 -     51505 GGA-----CCCCTG----GA---CAT-----------G-------------------------GCAGTA-----
i Otolemur_crassicaudatus.k141_649260                    C 0 I 1
s Otolemur_garnettii.GL873799.1                             351460 21 +   1103335 GGA-----CCCCTG----GA---CAT-----------G-------------------------GCAGTA-----
i Otolemur_garnettii.GL873799.1                          C 0 I 1
s Ovis_aries.CM001607.2                                   26402934 22 -  44047080 A--TTTC---CC-A----GA---AGA-----------G-------------------------GTATTG---TT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3453 22 +     17875 A--TTTC---CC-A----GA---AGA-----------G-------------------------GTATTG---TT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             11205 24 -     26668 GTT------CCC-A----GA---GGT-----------G-------------------------GCATAAATTTT
i Pan_troglodytes.NBAG03003091.1                         C 0 I 106
s Panthera_onca.PanOnc_flattened_line_3271                   23250 22 -    230217 G--TT-CC--CC-A----CA---AGC-----------A-------------------------GTATTA---TT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460576 22 -  18783137 G--TT-CC--CC-A----CA---AGC-----------A-------------------------GTATTA---TT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971296 22 +   8748460 G--TT-CC--CC-A----CA---AGC-----------A-------------------------GTATTA---TT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614377 22 +   2937107 A--TTTC---CC-A----GG---AGA-----------G-------------------------GTATTG---TT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   241964 22 - 183742232 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8428 22 +     21308 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291000 22 -  20919399 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21083 22 -     27687 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14219 22 +     16796 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21029 22 -     23640 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13889 22 +     78924 G--TT-CC--CC-A----GG---AGA-----------G-------------------------GTATTA---TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24742 20 +     31479 GGA-----CCC-TA----GA---GAT-----------G-------------------------GCATTA-----
i Perodicticus_ibeanus.k141_1921260                      C 0 I 1
s Perodicticus_potto.k141_1854441                            17106 20 -     24908 GGA-----CCC-TG----GA---GAT-----------G-------------------------GCATTA-----
i Perodicticus_potto.k141_1854441                        C 0 I 1
s Perognathus_longimembris.PerPac_flattened_line_89005         468 14 +      9367 ATT-----AGCT-A----GA---GGA-----------G------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 11
s Peromyscus_maniculatus.KI615324.1                         245594 26 +  18517816 ATTT----CTCC-A----GA---GGAGGCATTATTTAG------------------------------------
i Peromyscus_maniculatus.KI615324.1                      I 5 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11193 22 -     15039 G--TT-CC--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1250 22 +     55023 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          801 22 -     89929 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1389 22 +     40849 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253056 22 +  14605196 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1631 22 +     22231 C--TT-CC--CC-A----GA---AGA-----------G-------------------------GTACTA---TT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63697 22 +    207309 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4791 22 -     25401 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30532 22 +     58159 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30808 22 +     63561 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30571 22 +     51148 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555538 22 -   4542175 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30555 22 +     51125 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3277 22 -      8168 G--TT-CC--CC-A----GA---AGA-----------G-------------------------GTGTTA---TT
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6959 22 +     39866 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCGTTA---TT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2044 22 -      9282 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCGTTA---TT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41448 22 -     87950 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCGTTA---TT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41841 22 -     88961 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6540 22 -     39403 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCGTTA---TT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41492 22 +     87928 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCGTTA---TT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6537 22 -     60166 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCGTTA---TT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13473 22 -     67232 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCGTTA---TT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41389 22 -     90634 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCGTTA---TT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42857 22 +     89403 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCGTTA---TT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176757 22 - 189387572 GTT-----CCCC-T----GA---GGT-----------G-------------------------GTATAA---TT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191574 22 -   9816681 GTT-----CCCC-T----GA---GGT-----------G-------------------------GTATAA---TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26386 22 +     69807 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATCA---TT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43579 21 -     80239 -TT-----CCCC-A----GA---GGT-----------G-------------------------GCATCA---TT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981408 22 +   4620579 GTT-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564874 22 -   2598838 GTT-----CCTC-A----AC---TGT-----------A-------------------------GCAATA---TT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2510 22 -      7103 GTT-----CCTC-A----AC---AGT-----------A-------------------------GCACTA---TT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3107 22 -     11706 GTT-----CCTC-A----AC---AGT-----------A-------------------------GCAATA---TT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6843 22 -     30655 GTT-----CCTC-A----AC---AGT-----------A-------------------------GCAATA---TT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33168 22 +     46564 GTT-----CCTC-A----AC---AGT-----------A-------------------------GCAATA---TT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93439 22 -     98465 GTT-----CCTC-A----AC---AGT-----------A-------------------------GCAATA---TT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7076 22 +     35169 GTT-----CCTC-A----AC---TGT-----------A-------------------------GCAATA---TT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50458 22 -     66298 G--TT-CC--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3510 22 -     18639 A--TT-CC--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839713 22 -  28871421 G--TT-CT--TC-T----GA---AGT-----------G-------------------------ATATTA---TT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536222 22 -   4952924 G--TT-CT--TC-T----GA---AGT-----------G-------------------------ATATTA---TT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097890 22 +  38429054 G--TT-CC--CC-A----CA---AGC-----------A-------------------------GTATTA---TT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25760 22 +     91421 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152253 22 -   7812017 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6630 22 +     72585 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51874 22 +     55069 A--TT-CC--CC-A----GA---AGA-----------G-------------------------GTATTG---TT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913600 22 +   3329780 g---ttcc--tc-a----ga---aga-----------a-------------------------atatta---tt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              330 22 +      7119 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120940 22 + 195417433 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235181 22 -   7961872 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73635 22 -    116970 G--TT-CC--TC-T----GA---AGT-----------G-------------------------ATCTTA---TT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2835 22 +     27962 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2730 22 +      6077 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2821 22 +      5971 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2761 22 +      5932 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1086 22 -      4390 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390519 22 - 209938924 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2711 21 +      5979 GTT------CCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3453 22 -      4301 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6527 22 +     16473 A--TTTC---CC-A----GA---AGA-----------G-------------------------GTATTG---TT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107857 22 + 121099817 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29419 22 -     47369 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29808 22 -     79414 GTC-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26500 22 -     34454 GTC-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13906 22 -     22428 GTC-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29051 22 -     47109 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237118 22 +   5703754 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6708 22 +     21866 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114818 21 +    313613 G--T-GC---CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24073 22 +     27374 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27591 22 +     58920 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14087 22 -     45317 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21746 22 -     42441 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24426 22 -     29113 GTT-----CCCC-A----GA---GGC-----------A-------------------------GCATTA---TT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27495 22 -     48123 GTT-----CCCC-A----GA---GGC-----------A-------------------------GCATTA---TT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48002 26 +     77746 ATT---C-CTCC-A----GA---GGCGGCAGTATTTAT------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                I 197 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857137 18 -   1910179 G---------CC-A----GA---AGA-----------G-------------------------GCATTA---CT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867129 22 +   3870691 TCC-----CCCC-A----GA---GGA-----------G-------------------------GCATTA---TT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5277 22 -     97271 G--TT-CC--CA-A----GA---AGA-----------G-------------------------GTATTA---TT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123724 25 +    196729 C--TT-CT--CC-A----GAGGACGA-----------G-------------------------GTATTA---TT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6639946 22 +  69701581 G--TT-CC--CC-T----GT---ACA-----------G-------------------------GTGTTT---TT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       389999 22 +   1523678 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12438 22 +     22964 G--TT-CT--CC-A----GA---AGA-----------G-------------------------GTGTTA---TC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1501 22 +      5583 GCT-----ACCC-A----GT---GGA-----------G-------------------------GCATTA---TT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190414 22 +    199430 g---ttcc--cc-a----ga---aga-----------g-------------------------gtaata---tt
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104366 22 -    539355 g---ttcc--cc-a----ga---aga-----------g-------------------------gtaata---tt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5709 22 +      6850 TCT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5760 22 +     20590 TCT-----CCCC-A----GA---GTT-----------G-------------------------GCATTA---TT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351952 22 - 186847797 GTT-----CCCC-A----GA---GGT-----------G-------------------------GCATTA---TT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18635 22 -     31044 GCT-----TCTC-A----GG---GAA-----------G-------------------------GCGTGG---TT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478482 22 -    610378 g---ttcc--ct-t----ga---agg-----------g-------------------------gtatta---tt
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19632 22 +     26378 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32301 22 -     78344 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18953 22 +     25722 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27252 22 -     62838 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27299 22 +     46913 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8106 22 -     28527 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29191 22 -     64340 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27228 22 -     63452 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8671 22 +     22490 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2099 22 -      6147 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9003 22 -     13050 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254243 22 -   6242583 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         268 22 +     19340 GTT-----CCCC-A----GA---GGC-----------G-------------------------GCATTA---TT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172144 21 -    200418 A--TT-C---CC-A----GA---AGA-----------G-------------------------GTGTTA---TT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479250 22 -  10818551 gac-----ttcc-a----ga---aga-----------g-------------------------gtgtat---tt
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832663 17 -   4065304 GTT-----CC-C-A----GA---GGG-----------G--------------------------C---A---CG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6979 17 -     70247 GTT-----CC-C-A----GA---GGG-----------G--------------------------C---A---TG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360074 22 -  33153633 g---ttcc--cc-a----ga---aga-----------g-------------------------gtatta---tt
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    1018 21 -     21056 A--T-GC---CC-A----GA---AGA-----------G-------------------------GCATTA---TT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 276
s Ursus_maritimus.KK499267.1                                180662 22 +   5085361 A--TT-CC--CC-A----GA---AGA-----------G-------------------------AGATTA---TT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24052 22 -     30710 TTC-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22959 22 -    147434 TTC-----CCCC-A----GC---AGT-----------A-------------------------GCAATA---TT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75157 11 +   5488506 A--TT-CC--TC-A----GA---A--------------------------------------------------
i Vicugna_pacos.KN270157.1                               C 0 I 8
s Vulpes_lagopus.VulLag_flattened_line_12041                103801 22 -    112863 A--TT-CT--CC-A----GA---AGA-----------G-------------------------GTATTA---TT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172907 22 -    224448 GTC-----CCCC-A----GA---GGA-----------G-------------------------GCATTA---TT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27701 22 -     86975 a---ttcc--cc-a----ga---aga-----------g-------------------------gtatta---tt
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2187 25 +      2695 GTC-----CCCT-G----GA---GGAGACATTATTTAC------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 9 I 34
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23065  1 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     30738  1 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1925834 54 -  22651954 I
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Rattus_norvegicus.chr16                                 37021351  0 -  90668790 C
e Psammomys_obesus.NESX01036366.1                            35454  0 +     52041 C
e Mus_spretus.CM004101.1                                  39495426  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58215994  0 +  89631738 C
e Mus_musculus.chr8                                       41686106  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35591747  0 + 120012414 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 47881  0 -    140813 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751  0 -    498745 C
e Equus_caballus.CM000403.2                               21373965  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041  0 -   4378816 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     18763  0 +     63021 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4302 34 +     36723 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGT--TGGT-GTC-AAG--------GA-------AAT
s Acinonyx_jubatus.LLWD01001279.1                           811651 42 +   1699592 TCAAG-GTATTTA-T-T-GC---------AT--ACT-G---T--------GTAT--TGAT-TTC-GAA--------AC-------ACT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18763  1 +     63021 ---------------------------------------------------------------------------------------C
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414178 42 +  29979442 tgaAG-GTATCAA-T-T-AC---------AG--AGT-G---T--------GTAT--TGAT-TTC-AAg--------gg-------aat
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214275 42 +    347723 TGAAG-GTATCAA-T-T-AC---------AT--AGT-A---T--------GTAT--TGAC-TTT-AAg--------gg-------aat
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16781 32 -     61208 ----G-G-------T-T-AC---------AT--AGT-G---T--------AGGT--TGAT-ATT-AAG--------GA-------TAT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   46625 36 +     53615 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42570 36 +     44087 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15207 36 -     21945 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16880 36 +     32033 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71026 36 -     84148 TGGAA-G-------T-T-AC---------AT--AGC-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43259 36 -     78289 TGGAA-G-------T-T-AC---------AG--AGC-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42705 36 +     55831 TGGAA-G-------T-T-AC---------AT--AGC-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41146 45 -     64179 TGGAA-G-------T-T-ACAGAGGTTACAG--AGT-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22793 36 -     24835 TGGAA-G-------T-T-AC---------AG--AGC-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39776 36 +     45454 TGGAA-G-------T-T-AC---------AG--AGC-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45474 36 +     70886 TGGAA-G-------T-T-AC---------AT--AGC-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7599 36 +     30854 TGGAA-G-------T-T-AC---------CG--AGT-T---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31738 36 +     42133 TGGAA-G-------T-T-AC---------AG--AGT-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584017 37 +   2318259 TAAAG-G-------T-T-AC---------AT--AAT-G---T--------GTGC--TGAT-TTCTAAG--------GG-------AGT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175467 36 -    412891 tgaag-g-------t--tga---------gT--AGT-G---T--------GTGT--TGAT-TTC-AGG--------GG-------AGT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49117 36 -     68529 TGAAG-G-------T-T-AC---------AT--AAT-A---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   49528 36 -     65372 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGC--TGAT-GTG-AAG--------GA-------AAT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43282 36 +     43593 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGC--TGAT-GTG-AAG--------GA-------AAT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671295 36 +   5030052 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGC--TGAT-GTG-AAG--------GA-------AAT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22937 36 -     23494 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGC--TGAT-GTG-AAG--------GA-------AAT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                8073 36 +      8415 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGC--TGAT-GTG-AAG--------GA-------AAT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14819 17 -     32367 TGGAG-G-------T-T-AC---------AT--AGT-A---T----------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 7 I 13
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3759 36 -     15198 tgaAG-G-------T-T-GG---------GT--AGT-G---T--------GTGT--TGAT-TTC-AGG--------GG-------AGT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273538 36 +  21539123 TGGAT-G-------T-T-AC---------AT--AGC-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9704 36 +     48076 TGGAT-G-------T-T-AC---------AT--AGC-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4841 36 -     28759 TGGAT-G-------T-T-AC---------AT--AGC-G---T--------ATGT--TAAT-GTC-AAG--------GA-------AAT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32395 36 +     44353 TGGAT-G-------T-T-AC---------AT--AGC-G---T--------ATGT--TGAT-GTC-AAG--------CA-------AAT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47765 36 -     71267 TGGAT-G-------T-T-AC---------AT--AGC-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21825 36 -     33135 TGGAT-G-------T-T-AC---------AT--AGC-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5012 36 +     11645 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-AGC-AAG--------GG-------AAT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5018 36 -     19611 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-AGC-AAG--------GG-------AAT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955846 36 -  23207421 TGAAG-G-------T-T-GC---------CT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3055 36 -      4711 TGAAG-G-------T-T-GC---------CT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85013 36 +    124022 TGAAG-G-------T-T-AC---------AT--AAT-G---T--------ATGC--TGAT-TTC-AAG--------GG-------AGT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20546 36 +    288883 TGAAG-G-------T-T-AC---------GT--AAG-G---T--------GTGC--TGAT-GTC-AAG--------GG-------AGT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354933 36 +  48749331 TGAAG-N-------T-T-AC---------GT--AAG-G---T--------GTGC--TGAT-GTC-AAG--------GG-------AGT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753501 36 +   1948126 TGAAG-G-------T-T-AC---------GT--AAG-G---T--------GTGC--TGAT-GTC-AAG--------GG-------AGT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543640 36 -  45695690 TGAAG-A-------T-T-AC---------GT--AAG-G---T--------GTGC--TGAT-GTC-AAG--------GG-------AGT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528664 36 -   4408762 TGAAG-G-------T-T-AC---------AT--AAG-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AGG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6742 24 +     28062 ---------------------------------AGC-G---T--------ATGT--AGAT-GTC-AAG--------GA-------AAT
i Cacajao_ayresi.k141_96119                              I 10 C 0
s Cacajao_calvus.k141_89051                                  42036 24 -     91139 ---------------------------------AGC-G---T--------ATGT--AGAT-GTC-AAG--------GA-------AAT
i Cacajao_calvus.k141_89051                              I 10 C 0
s Cacajao_hosomi.k141_81245                                  19562 24 +     95584 ---------------------------------AGC-G---T--------ATGT--AGAT-GTC-AAG--------GA-------AAT
i Cacajao_hosomi.k141_81245                              I 10 C 0
s Cacajao_melanocephalus.k141_619699                         19475 24 +    119600 ---------------------------------AGC-G---T--------ATGT--AGAT-GTC-AAG--------GA-------AAT
i Cacajao_melanocephalus.k141_619699                     I 10 C 0
s Callibella_humilis.k141_1233062                             9011 36 +     18648 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8549 36 -     13885 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             617 36 -      8861 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AAG--------AA-------AAT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453010 36 + 189096842 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AAG--------AA-------AAT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                533 36 +      8664 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AAG--------AA-------AAT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629838 36 +  17673402 TGCAG-G-------T-T-AC---------TT--AGT-G---T--------GTGT--TGAT-TTC-AAA--------GG-------AGT
i Camelus_bactrianus.KN276810.1                          I 8 C 0
s Camelus_dromedarius.KN272107.1                           4664124 36 +   7040546 TGCAG-G-------T-T-AC---------TT--AGT-G---T--------GTGT--TGAT-TTC-AAA--------GG-------AGT
i Camelus_dromedarius.KN272107.1                         I 8 C 0
s Camelus_ferus.KB017975.1                                 1207784 36 +   1652518 TGCAG-G-------T-T-AC---------TT--AGT-G---T--------GTGT--TGAT-TTC-AAA--------GG-------AGT
i Camelus_ferus.KB017975.1                               I 8 C 0
s CanFam4.chr16                                           42504193 42 +  60362399 TGGAG-GTATCAA-T-T-AC---------AC--TGT-G---T--------GTAT--TGAC-TTC-AAG--------GG-------AAT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7829 42 -     23171 TGGAG-GTATCAA-T-T-AC---------AC--TGT-G---T--------GTAT--TGAC-TTC-AAG--------GG-------AAT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221172 42 +   9314153 TGGAG-GTATCAA-T-T-AC---------AC--TGT-G---T--------GTAT--TGAC-TTC-AAG--------GG-------AAT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614307 42 +  59632846 TGGAG-GTATCAA-T-T-AC---------AC--TGT-G---T--------GTAT--TGAC-TTC-AAG--------GG-------AAT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105888 42 -  63665305 TGGAG-GTATCAA-T-T-AC---------AC--TGT-G---T--------GTAT--TGAC-TTC-AAG--------GG-------AAT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407729 37 -  46296322 TGAAG-G-------T-T-AC---------AT--AAT-G---T--------GTGC--TGAT-TTCTAAG--------GG-------AGT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590002 37 +  44709034 TGAAG-G-------T-T-AC---------AT--AAT-G---T--------GTGC--TGAT-TTCTAAG--------GG-------AGT
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269105 36 +    496798 TGGAG-A-------T-T-AC---------AT--AGC-A---T--------ATGT--TGAT-GTC-AAg--------ga-------aat
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               4048 36 +      5315 TGAAG-G-------T-T-GG---------GT--AGT-G---T--------GTGT--TGAT-TTC-AGG--------GG-------AAT
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75507 36 -    217609 TGAAG-G-------T-T-AC---------AT--AGT-G---T--------GTAC--TGAT-TTC-AAG--------GG-------AAT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994761 36 +  23392119 ---AA-A-------T-T-AT-----TT-GAA--AGT-G---T--------ATGT--TGAT-ATA-AGA--------GG-------AAT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998203 36 +  23407841 ---AA-A-------T-T-AT-----TT-GAA--AGT-A---T--------ATGC--TGAT-ATA-AGA--------GG-------AAT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61304 36 -     66877 ---AA-A-------T-T-AT-----TT-GAA--AGT-A---T--------ATGC--TGAT-ATA-AGA--------GG-------AAT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3930 36 -     12580 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGC--TGAT-GTC-AAG--------GA-------AAT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               41985 36 +     53515 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369923 36 -  26074798 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6812 36 -     34880 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65907 36 -     89041 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1036 36 -      5494 TGGAG-A-------T-T-AC---------AT--AGC-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15490984 36 -  27778364 TGAAG-G-------T-T-AC---------GT--AGC-G---T--------GTGT--TGTT-TTC-AAA--------GG-------AAT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17817 36 +     27315 TGAAG-G-------T-T-AC---------GT--AGC-G---T--------GTGT--TGTT-TTC-AAA--------GG-------AAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139801 36 -   4669795 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43542 36 +     47900 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43374 36 -     44860 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43357 36 -    148725 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25580 36 -     40656 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5549 36 +     20796 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10619 36 -     17524 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26340 36 -     34525 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10170 36 -     25376 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362764 37 -  39242232 TGGAA-G-------T-T-AT-----T---AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268477 36 +  21565898 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30815 36 -     45857 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ACGT--TGAT-GTC-AAG--------GA-------AAT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25753 36 -     32606 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1910 36 +      8499 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24311 36 +     70610 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21234 36 +     36323 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11621 22 -     19938 TGAAG-G-------T-T-AC---------GT--AGA-G---T--------GTGT--G-------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 6
s Cheirogaleus_major.k141_666340                             29430 36 -     33796 TAGAC-A-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-ATA-AAG--------GG-------AAT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3947 36 -     15404 TAGAT-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-ATA-AAG--------GG-------AAT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7813 36 -     32913 TGGAA-G-------T-T-AC---------AT--AGC-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18226 36 -     40346 TGGAA-G-------T-T-AC---------AT--AGC-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18481 36 +    216457 TGGAA-G-------T-T-AC---------AT--AGC-G---T--------ATGT--TTAT-GTC-AAG--------GA-------AAT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18274 36 +     39636 TGGAA-G-------T-T-AC---------AT--AGC-G---T--------ATGT--TTAT-GTC-AAG--------GA-------AAT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237227 34 -   2543920 ------a-------t--tat------ttgaa--agt-g---t--------ATGT--TCAT-ATA-AGG--------AG-------AGt
i Chinchilla_lanigera.JH722012.1                         N 0 C 0
s Chiropotes_albinasus.k141_1946120                           2859 36 +      5346 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AGG--------GA-------AAT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41360 34 -    112038 TGGAA-G-------T--GAC---------A----GC-G---T--------ATGT--GGAT-GTC-AAG--------GA-------AAT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6932 34 +     34062 TGGAA-G-------T--GAC---------A----GC-G---T--------ATGT--GGAT-GTC-AAG--------GA-------AAT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342129 36 +  18827391 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8675 36 -     44032 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303454 36 - 135778131 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10674 36 +     15858 TGAAG-G-------TCT--C---------AT--AGT-G---T--------GTGT--TGGT-GTC-ATA--------GG-------AAC
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            602250 36 -    839153 TGAAG-G-------TC--AC---------AT--AGT-G---T--------GTGT--TGGT-GTC-ATA--------GG-------AAC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407900 36 -   2368649 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377777 36 - 200372422 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1324 36 -     84244 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806049 36 +  53390261 TGAAG-G-------T-T-AA---------GT--AAT-A---T--------AGGT--TGAT-TTC-AAA--------GG-------AAT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1624 36 -      8242 TGAAG-T-------T-T-AC---------AT--AGT-G---T--------GTGT--TGAT-TTC-AAG--------GG-------AAT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41046 35 -     83289 ---AG-G-------TCTCCC---------AT--AGT-G---A--------ATGT--TGAT-ATC-AAG--------GG-------AAT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113495 35 - 224834208 ---CG-A-------TCTGAT---------GT--AGT-G---C--------ATGT--TGAT-ATC-AAG--------GG-------GAT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3104 50 +     87169 TAAAG-GTATCTA-T-T-AC---------AT--AGT-G---TAATACATAGTAT--TGAT-TTC-AAG--------GC-------ACT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643562 33 -   1526836 ---AG-G-------T-T-AT---------AC--AGT-A---T--------ATAT--TGAT-ATC-AAG--------AG-------AAT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   3782 36 +     50838 ---AA-A-------T-T-AT-----TTA-TA--AGT-T---T--------GTGT--TCAC-ATC-AGG--------GG-------AAT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 8134
s Cuniculus_paca.CunPac_flattened_line_7025                   2681 36 +     36344 ---AA-A-------T-T-AT-----TT-GAA--AGT-G---T--------ATGT--TGAT-ATA-AGG--------GG-------AAT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26451 36 +     75252 ---AA-A-------T-T-AT-----TT-GAA--AGT-G---T--------GTGT--TGAT-ATA-AGG--------AG-------AAT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108964 22 -   2246927 TGAAG-G-------T-T-AC---------AT--AGT-G---T--------GTGT--T-------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 6
s Daubentonia_madagascariensis.ctg71                        291384 36 +  12879189 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-ATC-AAG--------GG-------AAT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624175 36 -  35494412 tgaAG-G-------T-T-GC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863497 36 -  20541912 tgaag-g-------t--tgg---------ac--AGT-G---T--------GTGT--TGAT-TTC-AGG--------GG-------AAT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663275 36 -   1390856 TGAAG-G-------T-T-AC---------GT--AGC-A---T--------GTGT--TGAT-TTC-AAA--------GG-------AAT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138061 36 -    198055 TGAAG-G-------T-T-AC---------AT--AGC-G---T--------GTGT--TGTT-TTC-AAA--------GG-------AAT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97257 36 -    115145 ---AA-A-------T-T-AT-----TT-GAA--AGT-G---T--------ATGT--TCAT-ATA-AGG--------GG-------AAT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949127 27 -  37912305 ---AG-G-------T-T-AT---------CT--AGT-G---T--------GTGC--CGAT-ATT-GA---------------------
i Dipodomys_ordii.KN672350.1                             I 11 I 2
s Dipodomys_stephensi.DipSte_scaffold_89095                   4074 27 -     10735 ---AG-G-------T-T-AT---------CT--AGT-G---T--------GTGC--CGAT-ATT-GA---------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 11 I 2
s Dolichotis_patagonum.DolPat_scaffold_80628                  8726 36 +     14636 ---AA-A-------T-T-AT-----TT-GAA--AGT-G---A--------ATGG--TGAT-ATA-AGA--------GG-------AAT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853117 18 - 111700974 ---------------------------------------------------TGT--TAAT-GTC-AAG--------GG-------AAC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5085 36 +     19438 TTAAG-G-------T-T-AC---------AT--ATT-G---T--------ATCC--CGAT-TTA-AAG--------GG-------aat
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238404 36 -    607251 TGAAG-G-------T-T-AC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107140  7 -  10337057 ---------------------------------------------------TGT--TATT----------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 226
s Ellobius_lutescens.LOEQ01008920.1                          29769 35 +    110024 ---AG-T-------TCTTAT---------GT--AGT-G---C--------CTGT--TGAT-ATT-AAG--------GA-------AAT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11744 35 +     18970 ---AG-T-------TCTTAT---------GT--AGT-G---C--------CTGT--TGAT-ATT-AAG--------GA-------AAT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914929 42 +  41312741 TGAAG-GTATCAA-T-T-AC---------AT--AGT-A---T--------GTAT--TGAT-TTC-AAG--------Gg-------aat
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577126 36 +  14770903 tgaAG-G-------T-T-GC---------AT--AGT-G---T--------GTGT--TGAT-TTC-AAG--------GA-------AAT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                               261655 36 +  21539334 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63725 36 -    133382 tgaAG-G-------T-T-GC---------CT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3942 36 +      7672 TGACG-G-------T-T-GC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13556 36 -     24895 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTGT--TGAT-ATC-AAG--------GG-------AAT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41265 36 -     70999 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTGT--TGAT-ATC-AAG--------GG-------AAT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85227 36 +    112731 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTGT--TGAT-ATC-AAG--------GG-------AAT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41800 36 +     68309 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTGT--TGAT-ATC-AAG--------GG-------AAT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52122 36 -     65740 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTGT--TGAT-ATC-AAG--------AG-------AAT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22755 36 -     75513 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTGT--TGAT-ATC-AAG--------GG-------AAT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46948 36 -     97555 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTGT--TGAT-ATC-AAG--------GG-------AAT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3673 36 +     30972 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTGT--TGAT-ATC-AAG--------GG-------AAT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41395 36 -     52037 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTGT--TGAT-ATC-AAG--------GG-------AAT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57799 36 -    111500 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTGT--TGAT-ATC-AAG--------GG-------AAT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245564 42 - 206538554 TAAAG-GTATTTA-T-T-AC---------AT--ACT-G---T--------GTAT--TGAT-TTT-GAA--------AC-------ACT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115349 42 - 205367284 TAAAG-GTATTTA-T-T-AC---------AT--ACT-G---T--------GTAT--TGAT-TTT-GAA--------AC-------ACT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26451 42 -     30238 TAAAG-GTATTTA-T-T-AC---------AT--ACT-G---T--------GTAT--TGAT-TTC-GAA--------AC-------ACT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123326 37 -    137831 TGAAG-G-------T-T-AC---------AA--AGT-A---T--------ATAT--TGATAAGC-AAG--------AG-------AAG
i Galago_moholi.ctg3793                                  I 1 C 0
s Galago_senegalensis.k141_991736                             6871 37 +     22493 TGAAG-G-------T-T-AC---------AA--AGC-A---T--------ATAT--TGATAAGC-AAG--------AG-------AAG
i Galago_senegalensis.k141_991736                        I 1 C 0
s Galagoides_demidoff.k141_561628                            18922 37 -     32986 TGGAG-G-------T-T-AC---------AA--AGT-A---T--------ATGT--TGATAATC-AAG--------AG-------AAT
i Galagoides_demidoff.k141_561628                        I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17873 43 +     18121 TGGAA-G-------C-T-AC---------AT--AGT-G---T--------ATGT--TGAT-GTC-AAG--------GGGGTAAAGAAC
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90083 36 -     95226 TGAAG-A-------T-T-AC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            32999 36 -     36801 TGTAG-G-------T-T-GC---------AT--AGA-A---T--------ATCC--TCAT-ATT-GAG--------GG-------AAT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4619 34 -      8343 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGT--TGGT-GTC-AAG--------GA-------AAT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253630 34 - 186649187 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGT--TGGT-GTC-AAG--------GA-------AAT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     497 36 -     78134 TGTAG-G-------T-T-GC---------AT--AGT-A---T--------ATCT--TGAT-ATA-GAG--------TG-------AAT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13482 36 -     40692 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTAT--TGAT-ATC-AAG--------GG-------AAT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34884 36 +     49394 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTAT--TGAT-ATC-AAG--------GG-------AAT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59753 36 -     66874 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTAT--TGAT-ATC-AAG--------GG-------AAT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8626 36 -     42923 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTAT--TGAT-ATC-AAG--------GG-------AAT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15626 36 -     53142 TGGAG-G-------T-T-AC---------AA--AGT-A---T--------GTAT--TGAT-ATC-AAG--------GG-------AAT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29589 42 -    327341 TAAAG-GTATATA-T-T-AC---------AC--AGT-G---T--------GTAT--TGAT-TTC-AAG--------CC-------ACT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7836 37 +     48891 TGAAG-G-------T-T-AC---------AT--AAT-G---T--------GTGC--TGAT-TTCTAAG--------GG-------AGT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925888  2 -  22651954 --------------------------------------------------------------------------------------AT
i Heterocephalus_glaber.JH602082.1                       I 54 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6438 36 -     36432 TGAAG-G-------T-T-GC---------AT--AAT-G---T--------GTGT--TGAT-TTC-AAG--------GG-------AAT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49605 36 +     49977 TGAAG-G-------T-T-AT---------AC--AGT-A---T--------GTGC--TGAT-ATC-AAG--------GG-------AAT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141637 34 -    630532 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGC--TGAT-GTC-AAG--------GA-------AAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68508 42 +     83186 TAAAG-GTATCTA-T-T-TC---------AT--AGT-G---T--------GTAT--TTAT-TTC-AGG--------AC-------ACT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70154 36 +    143317 ---AA-A-------T-T-AT-----TT-CAA--AGT-G---T--------ATGT--TGAT-ATA-AGG--------GG-------AAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4667 34 +     12352 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGC--TGAT-GTC-AAG--------GA-------AAT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11851 34 +     55766 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGC--TGAT-GTC-AAG--------GA-------AAT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051449 34 + 191637585 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGC--TGAT-GTC-AAG--------GA-------AAT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800327 34 +  11177569 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGC--TGAT-GTC-AAG--------GA-------AAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385572 36 +   7955117 TGGAG-G-------C-T-AC---------AT--ATT-G---T--------ATAT--TGAT-ATc-aag--------ag-------aat
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1135 36 +     11955 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-ATC-AAG--------GG-------AAT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1962 36 -     16823 TGGAG-G-------T-T-GC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237965 33 +   9596543 ---AG-T-------T-T-AT---------AT--AGT-G---T--------AGGT--TGGt-att-aag--------ga-------aat
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_3970                 64446 36 -     97402 TGAAG-G-------T-T-GC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42080 36 +    110728 TGGAA-G-------T-T-AC---------AT--AGT-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    30229 36 -     49555 GGAAG-G-------T-T-GC---------AT--AGT-G---T--------GTGT--GGAT-TTC-AAG--------GA-------AAT
i Lasiurus_borealis.LasBor_scaffold_26245                I 856 I 827
s Lemur_catta.scaffold_24                                 14758275 36 +  30322482 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTGT--TGAT-ATC-AAG--------GG-------AAT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        2995 36 -     13097 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AGG--------GA-------AAT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2750 36 +      5940 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AGG--------GA-------AAT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2580 36 -      5717 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AGG--------GA-------AAT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8947 36 -     11567 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10328 36 -     12945 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7804 36 +     29618 TGGAG-A-------T-T-AC---------AT--AGT-A---T--------AAAT--TGAT-ATC-AAG--------GG-------AAT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7800 36 +     31569 TGGAG-A-------T-T-AC---------AT--AGT-A---T--------AAAT--TGAT-ATC-AAG--------GG-------AAT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7812 36 +     24756 TGGAG-A-------T-T-AC---------AT--AGT-A---T--------AAAT--TGAT-ATC-AAG--------GG-------AAT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7810 36 +     16388 TGGAG-A-------T-T-AC---------AT--AGT-A---T--------AAAT--TGAT-ATC-AAG--------GG-------AAT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812325 42 -   3914936 tgaAG-GTATCAA-T-T-AC---------AT--AGT-G---T--------GTAT--TGAT-TCC-aag--------ga-------aat
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16658 34 +     24238 TGGAA-A-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GCT-AAG--------GG-------A--
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333482 36 +    662738 CGAAG-G-------T-T-GT---------GT--AAC-G---T--------GTGC--TGAT-TTC-AAA--------GG-------AAT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               331759 36 -   1826925 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9083 37 +     19643 TGGAG-G-------T-T-AT---------AA--AGT-A---T--------ATAT--TGAAAAGA-AAG--------AG-------AAT
i Loris_lydekkerianus.k141_2031736                       I 1 C 0
s Loris_tardigradus.ctg83                                  5042744 37 -   6120653 TGGAG-G-------T-T-AT---------AA--AGT-A---T--------ATAT--TGAAAAGA-AAG--------AG-------AAT
i Loris_tardigradus.ctg83                                I 1 C 0
s Loxodonta_africana.GL010049.1                           39079823 33 +  43346337 tgaAG-G-------T-T-AC---------A-----T-A---T--------GTGT--TAAA-GTc-aag--------tg-------aat
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613462 42 +  59628241 TAGAG-GTATCAA-T-T-AC---------AC--TGT-G---T--------GTAT--TGAC-TTC-AAG--------AG-------AAT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44076 36 -     61512 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371736 36 -  60120075 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                23989 36 +     30207 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21092 36 -     24934 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23942 36 +     30527 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35132 36 -     50087 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44903 36 +     51645 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414072 36 - 187317192 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398295 36 +  25927173 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47459 36 -     62418 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                24115 36 +     24253 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43934 36 +     59329 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269862 36 +    668171 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  117 36 +      1732 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1646 36 +     17132 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222048 36 -    270270 TCAAG-G-------T-T-AC---------GT--ATT-G---T--------ATCC--TGAT-TTA-AAG--------GG-------AAT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321146 36 +  24302211 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               355978 36 -    752769 TGGAA-G-------T-T-AT---------AT--GGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672358 36 -    737560 TGAAG-G-------T-T-AC---------CT--AGT-G---T--------GTAT--CCAG-TTC-AAG--------AG-------ATG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219645 36 +    317179 TGAAG-G-------T-T-AC---------CT--AGT-G---T--------GTAT--CCAG-TTC-AAG--------AG-------ATT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499793 36 +  40650429 TTGAG-G-------C-T-AC---------AT--ATT-G---T--------ATAT--TGAT-ATc-aag--------ag-------aat
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149204 36 +    207569 TGAAA-A-------T--GAC---------AC--AGT-T---T--------ATGT--TGAT-ATC-AAG--------GG-------AAT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24818 42 -     74585 TGAAG-GTATTAA-T-T-AC---------AT--AGT-A---T--------GTAT--TGAT-TTC-AAG--------GT-------AAT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47881  1 -    140813 ---------------------------------------------------------------------------------------T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428045 35 +  29670104 ---AG-G-------TCTTAT---------GT--GGC-A---C--------ATGT--TAAT-ATC-AAG--------GG-------GAT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80028 36 +     93471 tgaAG-G-------T-T-GC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9121 36 +     17804 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9623 36 -     12984 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17937 36 -     26561 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983416 35 +  93316391 TAGAG-T-------T-T-AC---------AT--AGT-A---T--------ATGT--TGTT-ATA-AAG--------GG-------AA-
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44212 18 +    145209 ---------------------------------------------------TGT--TAAT-GTC-AAG--------GG-------AAC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183438 36 +    200668 TGAAG-G-------T-T-GG---------AG--AGT-G---T--------GTGT--TGAT-TTC-AGG--------GA-------AAT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961181 35 +  27267610 ---AG-T-------TCTTAT---------AT--AGT-G---C--------CTGT--TGAT-ATC-AAG--------GA-------AAT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361536 36 -   8254450 TGAAG-G-------T-T-GC---------AT--AAT-A---T--------GTGT--TGAT-TTC-GAG--------GG-------ATT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40437 36 -     48117 TGAAG-G-------T-T-GC---------AT--AAT-A---T--------GTGT--TGAT-TTC-GAG--------GG-------ATT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21158 36 -     27822 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7332 42 +     27589 tgaAG-GTGT-CAGT-T-AC---------AT--AGT-G---T--------GTAT--TGAT-TCC-AAG--------GA-------AAT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51207 35 -     62432 TAGAG-G-------T-T-AT---------AT--AGT-A---T--------ATGT--TGAT-ATA-AAA--------GG-------AA-
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351918 36 +    437263 tgaAG-G-------T-T-GT---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177598 36 +    366855 TGAAG-G-------T-T-GC---------AT--ACT-G---T--------GTGT--TGAT-TTC-AAG--------GG-------AAT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23132 36 -     82753 TGAAG-G-------A--AAC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AGT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17342 42 -     63510 TAAAG-GTATATA-T-T-AC---------AC--AGT-G---T--------GTAT--TGAT-TTC-AAG--------CC-------ACT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37473 36 +     47283 tgaAG-G-------T-T-GC---------AT--AGT-G---T--------GTGT--TGAT-TTC-AAG--------GA-------AAT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35591747  1 + 120012414 ---------------------------------------------------------------------------------------t
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686106  1 + 129401213 ---------------------------------------------------------------------------------------t
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58215994  1 +  89631738 ---------------------------------------------------------------------------------------t
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495426  1 + 130317789 ---------------------------------------------------------------------------------------t
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81581 34 -     86153 AGTAG-G-------T-T-GC---------AT--AGT-G---T--------AGGT--TG-C-AT--GAG--------GG-------AAT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14353965 42 +  14710649 TGAAG-GTATCAA-T-T-AC---------AT--AGT-A---T--------GTAT--TGAT-TTC-AAG--------Gg-------aat
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791522 36 +  10118263 tgaA-GG-------T-T-GC---------AT--AGT-G---T--------GTGT--TGAT-TTC-AAG--------GA-------AAT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385883 35 +   6019432 TGAA--G-------T-T-GC---------AT--AGT-A---T--------GTGT--TGAT-TTC-AAG--------GA-------aat
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381704 35 +   4330536 tgaA--G-------T-T-GC---------AT--AGT-G---T--------GTGT--TGAT-TTC-AAG--------GA-------AAT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          532 35 +     18357 TGAA--G-------T-T-GC---------AT--AGT-A---T--------GTGT--TGAT-TTC-AAG--------GA-------AAT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118407 36 +    130748 TGAAG-G-------T-T-AC---------AT--AGC-G---T--------GTGT--TGGT-GTC-ATA--------GG-------AAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             944871 33 +   3037898 ---ag-g-------t--tgc---------at--tgt-g---t--------aTGT--TGGT-ATC-AAG--------GG-------AAT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              27824 36 +     34575 TGGAA-G-------T-T-TT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467928 42 -  31847680 tgaAG-GTATCAA-T-T-AC---------AT--AGT-G---T--------GTAT--TGAT-TCC-aag--------ga-------aat
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226087 36 -   7148211 tgaAG-G-------T-T-GC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126385 36 -    149072 TGAAA-G-------T-T-GC---------AT--TGT-G---T--------ATGT--TGAT-TTC-AAA--------GG-------AGT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52559 34 -    132029 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGC--TGAT-GTC-AAG--------AA-------AAT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8654 34 -     16345 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGC--TGAT-GTC-AAG--------AA-------AAT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14539 34 +     22201 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGC--TGAT-GTC-AAG--------AA-------AAT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412760 34 -  22158432 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGC--TGAT-GTC-AAG--------AA-------AAT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24937 34 -     54323 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGC--TGAT-GTC-AAG--------AA-------AAT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197059 18 +   9404916 TGGAG-GTATCAA-T-T-AC---------AC---------------------------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 20
s Nycticebus_bengalensis.LG01                             93635081 35 + 196305487 TGGAG-G-------T-T-AT---------AA--AGT-A---T--------AT----TGAAAAGG-AAG--------AG-------AAT
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_3846325                             1839 35 -      3937 TGGAG-G-------T-T-AT---------AA--AGT-A---T--------AT----TGAAAAGG-AAG--------AG-------AAT
i Nycticebus_coucang.k141_3846325                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563320 35 - 199412804 TGGAG-G-------T-T-AT---------AA--AGT-A---T--------AT----TGAAAAGG-AAG--------AG-------AAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Ochotona_princeps.JH802162.1                             2550023 34 -   3988456 TGGAG-G-------CC--AC---------TT--AGA-G---C--------AAGC--TGAT-GTG-AAG--------GG-------A--
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11046288 36 -  11899542 ---AA-A-------T-T-AT-----TT-GAA--AGT-G---T--------GTGT--TCAC-AAC-AGG--------GG-------AAT
i Octodon_degus.JH651603.1                               C 0 I 6585
s Odobenus_rosmarus.KB229312.1                             1450525 42 +   2017862 tgaAG-GTATCAA-T-T-AC---------AT--AGT-G---T--------ATAT--TGAT-TTC-aag--------ga-------aat
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         434975 36 -    630418 TGAAG-G-------T-T-AC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          12967 36 +    150152 tgaAG-G-------T-T-AC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91540 35 -    140218 ---GG-T-------TCTTAT---------GT--AGT-G---C--------CTGT--TCAT-ATC-AAG--------GA-------AAT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2399 35 -     41509 ---AG-G-------TCTTAT---------GA--AGT-G---C--------ATGT--TGAT-ATC-AAG--------GG-------AAT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095357 36 +  10937097 tgaAG-G-------T-T-GC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12447 18 -     14239 ---------------------------------------------------TGC--TAAT-ATC-AAG--------GG-------AAT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102495 34 - 174332312 tgGAA-A-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GCT-AAG--------GG-------a--
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38101 42 +    559221 TGGAG-GTAT-CAGT-T-AC---------AC--TGT-G---T--------GTAT--TGAC-TTC-AAG--------GG-------AAT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38479 37 -     51505 TGAAG-G-------T-T-AC---------AA--AGT-A---T--------ATAT--TGATAATC-AAG--------AG-------AAT
i Otolemur_crassicaudatus.k141_649260                    I 1 C 0
s Otolemur_garnettii.GL873799.1                             351482 37 +   1103335 TGAAG-G-------T-T-AC---------AA--AGT-A---T--------ATAT--TGATAATC-AAG--------AG-------Aat
i Otolemur_garnettii.GL873799.1                          I 1 C 0
s Ovis_aries.CM001607.2                                   26402956 37 -  44047080 TGAAG-G-------T-T-AC---------AT--AAT-G---T--------GTGC--TGAT-TTCTAAG--------GG-------AGT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3475 37 +     17875 TGAAG-G-------T-T-AC---------AT--AAT-G---T--------GTGC--TGAT-TTCTAAG--------GG-------AGT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03001968.1                              2670 35 -     50635 TGGAA-G-------T----C---------AT--AGTGG---T--------ATGT--TGGT-GTC-AAG--------GA-------AAT
i Pan_troglodytes.NBAG03001968.1                         I 53 n 106
s Panthera_onca.PanOnc_flattened_line_3271                   23272 42 -    230217 TAAAG-GTATTTA-T-T-AC---------AT--ACT-G---T--------GTTT--TGAT-TTC-GAA--------AC-------ACT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460598 42 -  18783137 TAAAG-GTATTTA-T-T-AC---------AT--ACT-G---T--------GTTT--TGAT-TTC-GAA--------AC-------ACT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971318 42 +   8748460 TAAAG-GTATTTA-T-T-AC---------AT--AGT-G---T--------GTTT--TGAT-TTC-GAA--------AC-------ACT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614399 36 +   2937107 TGAAG-G-------T--AAC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AGT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   241986 36 - 183742232 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8450 36 +     21308 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291022 36 -  20919399 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21105 36 -     27687 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14241 36 +     16796 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21051 36 -     23640 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13911 42 +     78924 TAAAG-GTATCTG-T-T-AC---------AT--AGT-G---T--------GTAT--TGAT-TTC-AAG--------AC-------GCT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24763 37 +     31479 TGGAG-G-------T-T-AC---------AA--AGT-A---T--------AT--GCTGATAATC-AAG--------AG-------AAT
i Perodicticus_ibeanus.k141_1921260                      I 1 C 0
s Perodicticus_potto.k141_1854441                            17127 37 -     24908 TGGAG-G-------T-T-AC---------AA--AGT-A---T--------AT--GCTGATAATC-AAG--------AG-------AAT
i Perodicticus_potto.k141_1854441                        I 1 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         493 31 +      9367 ---AG-G-------T-T-GC---------CT--AGT-C---T--------ATGC--TGAT-ATT-AA----------G-------AAT
i Perognathus_longimembris.PerPac_flattened_line_89005   I 11 C 0
s Peromyscus_maniculatus.KI615324.1                         245620 35 +  18517816 ---AG-G-------TCTTAT---------AT--AGT-G---C--------GTAT--TGAT-ATC-AAG--------GG-------AAT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30739  2 -     56120 --------------------------------------------------------------------------------------AT
i Petromus_typicus.PetTyp_scaffold_17301                 I 1 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11215 36 -     15039 TGAAG-G-------T-T-GC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1272 36 +     55023 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--CAGT-GTC-AAG--------GA-------AGT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          823 36 -     89929 TGGAA-G-------T-T-AT---------GT--AGA-G---T--------ATGT--CAAT-GTC-AAG--------GA-------AGT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1411 36 +     40849 TGGAA-G-------T-T-AT---------GT--AGA-G---T--------ATGT--CAAT-GTC-AAG--------GA-------AGT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253078 36 +  14605196 TGGAA-G-------T-T-AT---------GT--AGA-G---T--------ATGT--CAAT-GTC-AAG--------GA-------AGT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1653 36 +     22231 TGAAG-G-------T-T-GC---------AT--AGT-G---T--------GTGT--TGAT-TTc-aag--------ga-------aat
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63719 36 +    207309 TGGAA-G-------T--GAC---------AT--AGC-G---T--------ATGT--GGAT-GTC-AAG--------GA-------AAT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4813 36 -     25401 TGGAA-G-------T--GAC---------AT--AGC-G---T--------ATGT--GGAT-GTC-AAG--------GA-------AAT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30554 36 +     58159 TGGAA-G-------T--GAC---------AT--AGC-G---T--------ATGT--GGAT-GTC-AAG--------GA-------AAT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30830 36 +     63561 TGGAA-G-------T--GAC---------AT--AGC-G---T--------ATGT--GGAT-GTC-AAG--------GA-------AAT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30593 36 +     51148 TGGAA-G-------T--GAC---------AT--AGC-G---T--------ATGT--GGAT-GTC-AAG--------GA-------AAT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555560 36 -   4542175 TGGAA-G-------T--GAC---------AT--AGC-G---T--------ATGT--GGAT-GTC-AAG--------GA-------AAT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30577 36 +     51125 TGGAA-G-------T--GAC---------AT--AGC-G---T--------ATGT--GGAT-GTC-AAG--------GA-------AAT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3299 36 -      8168 TGAAG-G-------T-T-GT---------GT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        6981 36 +     39866 TGGAA-G-------T-T-AC---------AT--AGT-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2066 36 -      9282 TGGAA-G-------T-T-AC---------AC--AGT-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41470 36 -     87950 TGGAA-G-------T-T-AC---------AT--AGT-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41863 36 -     88961 TGGAA-G-------T-T-AC---------AT--AGT-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6562 36 -     39403 TGGAA-G-------T-T-AC---------AT--AGT-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41514 36 +     87928 TGGAA-G-------T-T-AC---------AT--AGT-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6559 36 -     60166 TGGAA-G-------T-T-AC---------AT--AGT-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13495 36 -     67232 TGGAA-G-------T-T-AC---------AT--AGT-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41411 36 -     90634 TGGAA-G-------T-T-AC---------AT--AGT-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42879 36 +     89403 TGGAA-G-------T-T-AC---------AT--AGT-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176779 34 - 189387572 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGT--TGGT-GTC-AAG--------GA-------AAT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191596 34 -   9816681 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGT--TGGT-GTC-AAG--------GA-------AAT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26408 36 +     69807 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAC-GTC-AAG--------GA-------AGT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43600 36 -     80239 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAC-GTC-AAG--------GA-------AGT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981430 36 +   4620579 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------GTGT--TGAT-ATC-AAG--------GG-------AAT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564896 36 -   2598838 TGGAG-G-------T-T-TC---------AT--AGT-A---T--------ATGT--TGAT-AGC-AAG--------GG-------AAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2532 36 -      7103 TGGAG-G-------T-T-TC---------AT--AGT-A---T--------ATGT--TGAT-AGC-AAG--------GG-------AAT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3129 36 -     11706 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-AGC-AAG--------GG-------AAT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6865 36 -     30655 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-AGC-AAG--------GG-------AAT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33190 36 +     46564 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-AGC-AAG--------GG-------AAT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93461 36 -     98465 TGGAG-G-------T-T-TC---------AT--AGT-A---T--------ATGT--TGAT-AGC-AAG--------GG-------AAT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7098 36 +     35169 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-AGC-AAG--------GG-------AAT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            35454  1 +     52041 ---------------------------------------------------------------------------------------t
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50480 36 -     66298 TGAAG-G-------T-T-GC---------AT--AGT-G---T--------GTGT--TGAT-TTC-AAG--------GG-------AAT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3532 42 -     18639 TGAAG-GTATCAA-T-T-AC---------AT--AGC-A---T--------GTAT--TGAT-TTC-AAG--------GG-------AAT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839735 36 -  28871421 TCAAG-G-------T-T-AC---------GT--ATT-A---T--------ATCC--CGAT-TTA-AAg--------gg-------aat
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536244 36 -   4952924 TCAAG-G-------T-T-AT---------GT--ATT-A---T--------ATCC--CGAT-TTA-AAG--------GG-------aat
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097912 42 +  38429054 TAAAG-GTATTTA-T-T-AC---------AT--ACT-G---T--------GTAT--TTAT-TTC-GAA--------AC-------ACT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25782 36 +     91421 TGGAA-G-------T-T-AT---------AT--GGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152275 36 -   7812017 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6652 36 +     72585 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51896 36 +     55069 TGAAG-G-------T-T-AC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021351  1 -  90668790 ---------------------------------------------------------------------------------------t
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913622 36 +   3329780 tgaag-g-------t--tAC---------AT--AGT-A---T--------GTGT--TGAT-ATC-AAG--------GG-------AAT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              352 36 +      7119 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120962 36 + 195417433 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235203 36 -   7961872 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73657 36 -    116970 TCAAG-G-------T-T-AC---------GT--ACT-G---T--------ATCC--TGAT-CTA-AAG--------GG-------AAT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2857 36 +     27962 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AGG--------GA-------AAT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2752 36 +      6077 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AGG--------GA-------AAT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2843 36 +      5971 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AGG--------GA-------AAT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2783 36 +      5932 TGGAA-G-------T-T-AC---------AT--ACT-A---T--------ATGT--TGAT-GTC-AGG--------GA-------AAT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1108 36 -      4390 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AGG--------GA-------AAT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390541 36 - 209938924 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AGG--------GA-------AAT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2732 36 +      5979 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AGG--------GA-------AAT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3475 36 -      4301 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AGG--------GA-------AAT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6549 36 +     16473 TGAAG-G-------T-T-AC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AGT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107879 36 + 121099817 TGGCA-G-------T-T-AC---------AT--AGC-A---T--------ATGT--TGAT-GTC-AAG--------GA-------Aat
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29441 36 -     47369 TGGCA-G-------T-T-AC---------AT--AGC-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29830 36 -     79414 TGGCA-G-------T-T-AC---------AT--AGC-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26522 36 -     34454 TGGCA-G-------T-T-AC---------AT--AGC-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13928 36 -     22428 TGGCA-G-------T-T-AC---------AT--AGC-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29073 36 -     47109 TGGCA-G-------T-T-AC---------AT--AGC-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237140 36 +   5703754 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6730 36 +     21866 TGGAA-G-------T-T-AC---------AT--AGT-A---T--------ATGC--TGAT-GTC-AAG--------GA-------AAT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114839 36 +    313613 TGAAG-G-------T-T-AC---------GT--AGT-A---T--------GTGT--TGAT-TTC-AAA--------GG-------AAT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24095 36 +     27374 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27613 36 +     58920 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14109 36 -     45317 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21768 36 -     42441 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24448 36 -     29113 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27517 36 -     48123 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48028 35 +     77746 ---TT-G-------TATTAT---------GT--AGT-A---C--------ATGT--TGAT-ATC-AAG--------GG-------AAT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857155 34 -   1910179 TGAAG-G-------C----C---------GT--AGT-G---T--------ATGT--TGAT-TTC-AAG--------GG-------ACT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867151 36 +   3870691 TGGAG-G-------C-T-AC---------AT--ATT-G---T--------ATAT--TGAT-ATC-aag--------ag-------aat
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5299 42 -     97271 TGAAG-GCAT-CAGT-T-AC---------AT--AGT-A---T--------GTAT--TGAT-TTC-AAG--------GG-------AGT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123749 42 +    196729 TAAAG-GTATATA-T-T-AC---------AT--AGT-G---T--------GTAT--TGAT-TTC-AAG--------CC-------ACT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6639968 36 +  69701581 TGAAA-G-------T-T-AC---------AT--AGT-G---C--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390021 34 +   1523678 TGGAA-G-------T----C---------AT--AGT-G---T--------ATGC--TGAT-GTC-AAG--------GA-------AAT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12460 36 +     22964 TGCAG-G-------T-T-GC---------AT--AGT-G---T--------GTGT--TGAT-TTC-AAG--------GG-------AAT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1523 36 +      5583 TGAAG-G-------T-T-AC---------AT--AGA-G---T--------GTGT--TGGT-GTC-ATA--------GG-------AAT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190436 36 +    199430 tgaAA-G-------T-T-AC---------GG--AGC-G---T--------GTGT--TGAT-TTC-CAG--------GG-------AAT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104388 36 -    539355 tgaAA-G-------T-T-AC---------GG--AGC-G---T--------GTGT--TGAT-TTC-CAG--------GG-------AAT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5731 36 +      6850 TGGAG-A-------T-T-AC---------AT--AGC-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5782 36 +     20590 TGGAG-A-------T-T-AC---------AT--AGC-A---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           351974 36 - 186847797 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23066  2 -     33621 --------------------------------------------------------------------------------------AT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 1 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18657 22 -     31044 TGAAG-G-------T-T-AC---------AG--AGT-G---T--------GTGT--G-------------------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 6
s Tonatia_saurophila.TonSau_scaffold_294                    478504 38 -    610378 tgaag-g-------t--tgg---------gG--AGT-GTG-T--------GTGT--TGAT-TTC-AGG--------GG-------AAT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19654 36 +     26378 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32323 36 -     78344 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-GAG--------GA-------AGT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       18975 36 +     25722 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27274 36 -     62838 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27321 36 +     46913 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8128 36 -     28527 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29213 36 -     64340 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27250 36 -     63452 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8693 36 +     22490 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2121 36 -      6147 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9025 36 -     13050 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-GAG--------GA-------AGT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254265 36 -   6242583 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-GAG--------GA-------AGT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         290 36 +     19340 TGGAA-G-------T-T-AT---------AT--AGA-G---T--------ATGT--TGAT-GTC-AAG--------GA-------AGT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172165 36 -    200418 ATAAG-A-------T-T-AC---------AT--AAT-G---T--------GTGT--GGAT-TTC-AAG--------GA-------AAT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479272 44 -  10818551 tgaAG-G-------T-T-AC---------A-----T-AGGGT--------GTGT--TAAT-GTC-AAGGGAGTAcgtg-------aat
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832680 33 -   4065304 TGGTG-G-------T-T-AC---------AT--AGC-A---T--------AT-----GAT-GTT-Gag--------gg-------aat
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       6996 33 -     70247 TGGTG-G-------T-T-AC---------AT--AGT-A---T--------AT-----GAT-GTT-GAG--------GG-------AAT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360096 36 -  33153633 tgaAG-G-------T-T-GC---------AT--AAT-G---T--------GTGC--TGAT-TTC-AAG--------GG-------AAT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    1315 17 -     21056 ----------------------------------------------------GT--TGAT-TTC-TAA--------GG-------AAT
i Uropsilus_gracilis.UroGra_scaffold_46687               I 276 C 0
s Ursus_maritimus.KK499267.1                                180684 42 +   5085361 TGAAG-GTATGAA-T-T-AC---------AT--AGT-G---T--------GTAT--TGAT-TTC-AAG--------gg-------aat
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24074 36 -     30710 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-ATC-AAG--------GG-------AAT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              22981 36 -    147434 TGGAG-G-------T-T-AC---------AT--AGT-A---T--------ATGT--TGAT-ATC-AAG--------GG-------AAT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75176 34 +   5488506 TGCAG-G-------T-T-AC---------TT--AGT-G---T--------GTGT--TGAT-TTC-AAA--------GG-------A--
i Vicugna_pacos.KN270157.1                               I 8 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103823 42 -    112863 TGGAG-GTATCAA-T-T-AC---------AC--TGT-G---T--------GTAT--TGAC-TTC-AAG--------GG-------AAT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172929 36 -    224448 TGGAG-G-------T-T-AC---------GT--ATT-G---T--------ATAT--TGAT-ATC-AAG--------GG-------AAT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27723 42 -     86975 tgaAG-GTATCAA-T-T-AC---------AT--AGT-G---T--------ATAT--TGAT-TTC-AAG--------GA-------AAT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_211135                      2217 33 +      3117 ---AG-G-------T-T-AC---------AT--TGT-G---T--------AGGT--TGAT-ATC-AAG--------GA-------AAA
i Zapus_hudsonius.ZapHud_scaffold_211135                 I 47 n 34
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751  0 -    498745 C
e Equus_caballus.CM000403.2                               21373965  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041  0 -   4378816 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4336 1 +     36723 A
s Acinonyx_jubatus.LLWD01001279.1                           811693 1 +   1699592 A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18764 1 +     63021 A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414220 1 +  29979442 a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214317 1 +    347723 t
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46661 1 +     53615 A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42606 1 +     44087 A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15243 1 -     21945 A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16916 1 +     32033 A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71062 1 -     84148 A
i Alouatta_belzebul.k141_1011583                         C 0 I 50
s Alouatta_caraya.k141_1109140                               43295 1 -     78289 A
i Alouatta_caraya.k141_1109140                           C 0 I 56
s Alouatta_discolor.k141_2561099                             42741 1 +     55831 A
i Alouatta_discolor.k141_2561099                         C 0 I 49
s Alouatta_juara.k141_1687208                                41191 1 -     64179 A
i Alouatta_juara.k141_1687208                            C 0 I 52
s Alouatta_macconnelli.k141_361275                           22829 1 -     24835 A
i Alouatta_macconnelli.k141_361275                       C 0 I 51
s Alouatta_nigerrima.k141_376068                             39812 1 +     45454 A
i Alouatta_nigerrima.k141_376068                         C 0 I 54
s Alouatta_palliata.k141_638677                              45510 1 +     70886 A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7635 1 +     30854 A
i Alouatta_puruensis.k141_251022                         C 0 I 55
s Alouatta_seniculus.k141_928287                             31774 1 +     42133 A
i Alouatta_seniculus.k141_928287                         C 0 I 52
s Ammotragus_lervia.NIVO01071767.1                         1584054 1 +   2318259 A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175503 1 -    412891 C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49153 1 -     68529 A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   49564 1 -     65372 A
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43318 1 +     43593 A
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671331 1 +   5030052 a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22973 1 -     23494 A
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                8109 1 +      8415 A
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14849 1 -     32367 A
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 13 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3795 1 -     15198 C
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273574 1 +  21539123 A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9740 1 +     48076 A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4877 1 -     28759 A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32431 1 +     44353 A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47801 1 -     71267 A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21861 1 -     33135 A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5048 1 +     11645 A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5054 1 -     19611 A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955882 1 -  23207421 A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3091 1 -      4711 A
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85049 1 +    124022 A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20582 1 +    288883 A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354969 1 +  48749331 A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753537 1 +   1948126 A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543676 1 -  45695690 A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528700 1 -   4408762 A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6766 1 +     28062 A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42060 1 -     91139 A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19586 1 +     95584 A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19499 1 +    119600 A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9047 1 +     18648 A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8585 1 -     13885 A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             653 1 -      8861 A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453046 1 + 189096842 A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                569 1 +      8664 A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629874 1 +  17673402 A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664160 1 +   7040546 A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207820 1 +   1652518 A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504235 1 +  60362399 T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7871 1 -     23171 T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221214 1 +   9314153 t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614349 1 +  59632846 t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105930 1 -  63665305 t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407766 1 -  46296322 A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590039 1 +  44709034 A
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_108409                   6248 1 +      8835 t
i Capromys_pilorides.CapPil_scaffold_108409              N 0 I 458
s Carlito_syrichta.NW_007259797.1                           269141 1 +    496798 a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               4084 1 +      5315 C
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75543 1 -    217609 A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994797 1 +  23392119 G
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998239 1 +  23407841 G
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61340 1 -     66877 G
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3966 1 -     12580 A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42021 1 +     53515 A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369959 1 -  26074798 A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6848 1 -     34880 A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65943 1 -     89041 A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1072 1 -      5494 A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491020 1 -  27778364 A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17853 1 +     27315 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139837 1 -   4669795 A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43578 1 +     47900 A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43410 1 -     44860 A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43393 1 -    148725 A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25616 1 -     40656 A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5585 1 +     20796 A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10655 1 -     17524 A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26376 1 -     34525 A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10206 1 -     25376 A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362801 1 -  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268513 1 +  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30851 1 -     45857 A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25789 1 -     32606 A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1946 1 +      8499 A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24347 1 +     70610 A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21270 1 +     36323 A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11649 1 -     19938 A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 6 C 0
s Cheirogaleus_major.k141_666340                             29466 1 -     33796 G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3983 1 -     15404 G
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7849 1 -     32913 A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18262 1 -     40346 A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18517 1 +    216457 A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18310 1 +     39636 A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237261 1 -   2543920 a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2895 1 +      5346 A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41394 1 -    112038 A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6966 1 +     34062 A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342165 1 +  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8711 1 -     44032 A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303490 1 - 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10710 1 +     15858 A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            602286 1 -    839153 a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407936 1 -   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377813 1 - 200372422 G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1360 1 -     84244 A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806085 1 +  53390261 A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1660 1 -      8242 C
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41081 1 -     83289 A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113530 1 - 224834208 A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3154 1 +     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643595 1 -   1526836 A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  11952 1 +     50838 t
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 8134 I 4297
s Cuniculus_paca.CunPac_flattened_line_7025                   2717 1 +     36344 G
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26487 1 +     75252 G
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108992 1 -   2246927 a
i Dasypus_novemcinctus.JH564415.1                        I 6 C 0
s Daubentonia_madagascariensis.ctg71                        291420 1 +  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624211 1 -  35494412 A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863533 1 -  20541912 C
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663311 1 -   1390856 A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138097 1 -    198055 A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97293 1 -    115145 G
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949156 1 -  37912305 G
i Dipodomys_ordii.KN672350.1                             I 2 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4103 1 -     10735 G
i Dipodomys_stephensi.DipSte_scaffold_89095              I 2 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8762 1 +     14636 G
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853135 1 - 111700974 A
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5121 1 +     19438 c
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238440 1 -    607251 A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29804 1 +    110024 A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11779 1 +     18970 A
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914971 1 +  41312741 a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577162 1 +  14770903 C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                               261691 1 +  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63761 1 -    133382 A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3978 1 +      7672 A
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13592 1 -     24895 A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41301 1 -     70999 A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85263 1 +    112731 A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41836 1 +     68309 A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52158 1 -     65740 A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22791 1 -     75513 A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46984 1 -     97555 A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3709 1 +     30972 A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41431 1 -     52037 A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57835 1 -    111500 A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245606 1 - 206538554 A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115391 1 - 205367284 A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26493 1 -     30238 A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123363 1 -    137831 G
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6908 1 +     22493 G
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18959 1 -     32986 G
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17916 1 +     18121 A
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90119 1 -     95226 A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33035 1 -     36801 G
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4653 1 -      8343 A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253664 1 - 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     533 1 -     78134 G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13518 1 -     40692 A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34920 1 +     49394 A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59789 1 -     66874 A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8662 1 -     42923 A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15662 1 -     53142 A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29631 1 -    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7873 1 +     48891 A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925890 1 -  22651954 G
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6474 1 -     36432 A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49641 1 +     49977 C
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141671 1 -    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68550 1 +     83186 A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70190 1 +    143317 G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4701 1 +     12352 A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11885 1 +     55766 A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051483 1 + 191637585 A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800361 1 +  11177569 A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385608 1 +   7955117 a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1171 1 +     11955 A
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                1998 1 -     16823 A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64482 1 -     97402 A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42116 1 +    110728 A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61026 1 -     65777 C
i Lasiurus_borealis.LasBor_scaffold_16567                I 36 C 0
s Lemur_catta.scaffold_24                                 14758311 1 +  30322482 A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3031 1 -     13097 A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2786 1 +      5940 A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2616 1 -      5717 A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8983 1 -     11567 A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10364 1 -     12945 A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7840 1 +     29618 A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7836 1 +     31569 A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7848 1 +     24756 A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7846 1 +     16388 A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812367 1 -   3914936 a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333518 1 +    662738 A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               331795 1 -   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9120 1 +     19643 G
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042781 1 -   6120653 G
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41613504 1 +  59628241 t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44112 1 -     61512 A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371772 1 -  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24025 1 +     30207 A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21128 1 -     24934 A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23978 1 +     30527 A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_maura.k141_1103459                                  44939 1 +     51645 A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414108 1 - 187317192 A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398331 1 +  25927173 A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47495 1 -     62418 A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                24151 1 +     24253 A
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43970 1 +     59329 A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_thibetana.k99_503078                                  153 1 +      1732 A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1682 1 +     17132 A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222084 1 -    270270 A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321182 1 +  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356014 1 -    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672394 1 -    737560 A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219681 1 +    317179 A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499829 1 +  40650429 a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149240 1 +    207569 C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24860 1 -     74585 A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47882 1 -    140813 A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428080 1 +  29670104 A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80064 1 +     93471 A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9157 1 +     17804 A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9659 1 -     12984 A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17973 1 -     26561 A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44230 1 +    145209 A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183474 1 +    200668 G
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961216 1 +  27267610 A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361572 1 -   8254450 T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40473 1 -     48117 T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21194 1 -     27822 A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7374 1 +     27589 A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351954 1 +    437263 A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177634 1 +    366855 C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23168 1 -     82753 A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17384 1 -     63510 A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37509 1 +     47283 C
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35591748 1 + 120012414 a
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686107 1 + 129401213 a
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58215995 1 +  89631738 c
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495427 1 + 130317789 a
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81615 1 -     86153 G
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354007 1 +  14710649 a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791558 1 +  10118263 C
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385918 1 +   6019432 c
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381739 1 +   4330536 C
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          567 1 +     18357 C
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118443 1 +    130748 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             944904 1 +   3037898 a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              27860 1 +     34575 A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467970 1 -  31847680 a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226123 1 -   7148211 A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126421 1 -    149072 C
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52593 1 -    132029 A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8688 1 -     16345 A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14573 1 +     22201 A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412794 1 -  22158432 A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24971 1 -     54323 A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197097 1 +   9404916 t
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 20 C 0
s Nycticebus_bengalensis.LG01                             93635116 1 + 196305487 G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1874 1 -      3937 G
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563355 1 - 199412804 G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450567 1 +   2017862 a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435011 1 -    630418 A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13003 1 +    150152 A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91575 1 -    140218 A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2434 1 -     41509 A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095393 1 +  10937097 A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12465 1 -     14239 A
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38143 1 +    559221 T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38516 1 -     51505 G
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351519 1 +   1103335 g
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402993 1 -  44047080 A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3512 1 +     17875 A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471689 1 - 189151597 A
i Pan_troglodytes.CM009242.2                             I 76 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23314 1 -    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460640 1 -  18783137 A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971360 1 +   8748460 A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614435 1 +   2937107 G
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242022 1 - 183742232 A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8486 1 +     21308 A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291058 1 -  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21141 1 -     27687 A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14277 1 +     16796 A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21087 1 -     23640 A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13953 1 +     78924 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24800 1 +     31479 A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17164 1 -     24908 A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         524 1 +      9367 A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245655 1 +  18517816 A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30741 1 -     56120 G
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11251 1 -     15039 A
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1308 1 +     55023 A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          859 1 -     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1447 1 +     40849 A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253114 1 +  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1689 1 +     22231 t
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63755 1 +    207309 A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4849 1 -     25401 A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30590 1 +     58159 A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30866 1 +     63561 A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30629 1 +     51148 A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555596 1 -   4542175 A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30613 1 +     51125 A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3335 1 -      8168 A
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7017 1 +     39866 A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2102 1 -      9282 A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41506 1 -     87950 A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41899 1 -     88961 A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6598 1 -     39403 A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41550 1 +     87928 A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6595 1 -     60166 A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13531 1 -     67232 A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41447 1 -     90634 A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42915 1 +     89403 A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176813 1 - 189387572 A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191630 1 -   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26444 1 +     69807 A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43636 1 -     80239 A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981466 1 +   4620579 A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564932 1 -   2598838 A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2568 1 -      7103 A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3165 1 -     11706 A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6901 1 -     30655 A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33226 1 +     46564 A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93497 1 -     98465 A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7134 1 +     35169 A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            35455 1 +     52041 a
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50516 1 -     66298 C
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3574 1 -     18639 A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839771 1 -  28871421 c
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536280 1 -   4952924 c
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097954 1 +  38429054 A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25818 1 +     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51932 1 +     55069 A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021352 1 -  90668790 a
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913658 1 +   3329780 C
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              388 1 +      7119 A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120998 1 + 195417433 A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235239 1 -   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73693 1 -    116970 C
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2893 1 +     27962 A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2788 1 +      6077 A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2879 1 +      5971 A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2819 1 +      5932 A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1144 1 -      4390 A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390577 1 - 209938924 A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2768 1 +      5979 A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3511 1 -      4301 A
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6585 1 +     16473 A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107915 1 + 121099817 a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29477 1 -     47369 A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29866 1 -     79414 A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26558 1 -     34454 A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13964 1 -     22428 A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29109 1 -     47109 A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237176 1 +   5703754 A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6766 1 +     21866 A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114875 1 +    313613 A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24131 1 +     27374 A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27649 1 +     58920 A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14145 1 -     45317 G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21804 1 -     42441 G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24484 1 -     29113 A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27553 1 -     48123 A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48063 1 +     77746 A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857189 1 -   1910179 A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867187 1 +   3870691 a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5341 1 -     97271 A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123791 1 +    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6640004 1 +  69701581 A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390055 1 +   1523678 A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12496 1 +     22964 C
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1559 1 +      5583 G
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190472 1 +    199430 A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104424 1 -    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5767 1 +      6850 A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5818 1 +     20590 A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352010 1 - 186847797 A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23068 1 -     33621 G
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18685 1 -     31044 A
i Tolypeutes_matacus.TolMat_scaffold_31955               I 6 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478542 1 -    610378 C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19690 1 +     26378 A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32359 1 -     78344 A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19011 1 +     25722 A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27310 1 -     62838 A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27357 1 +     46913 A
i Trachypithecus_geei.k141_1001272                       C 0 I 1
s Trachypithecus_germaini.k141_57262                          8164 1 -     28527 A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29249 1 -     64340 A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27286 1 -     63452 A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8729 1 +     22490 A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2157 1 -      6147 A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9061 1 -     13050 A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254301 1 -   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         326 1 +     19340 A
i Trachypithecus_pileatus.k141_2622778                   C 0 I 1
s Tragulus_javanicus.TraJav_scaffold_3462                   172201 1 -    200418 A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832713 1 -   4065304 g
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7029 1 -     70247 G
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360132 1 -  33153633 A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    1332 1 -     21056 A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180726 1 +   5085361 a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24110 1 -     30710 A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23017 1 -    147434 A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103865 1 -    112863 T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172965 1 -    224448 A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27765 1 -     86975 A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2246 1 +      2695 A
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 34 C 0
e Octodon_degus.JH651603.1                                11046324 6585 -  11899542 I
e Elephantulus_edwardii.JH947257.1                         9107147 226 -  10337057 I
e Pygathrix_nigripes_a.k141_215492                              6688 0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  152311 0 -   7812017 C
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Lepus_americanus.LepAme_scaffold_56121                     16692 0 +     24238 C
e Vicugna_pacos.KN270157.1                                   75210 0 +   5488506 C
e Trichechus_manatus.JH594705.1                            6479316 0 -  10818551 C
e Oryctolagus_cuniculus.CM000791.1                       107102529 0 - 174332312 C
e Ochotona_princeps.JH802162.1                             2550057 0 -   3988456 C
e Mirza_zaza.k141_766280                                     51242 0 -     62432 C
e Microcebus_murinus.CM007674.1                           74983451 0 +  93316391 C
e Macaca_silenus.Contig273                                  269898 0 +    668171 C
e Macaca_leonina.k141_321385                                 35168 0 -     50087 C
e Loxodonta_africana.GL010049.1                           39079856 0 +  43346337 C
e Jaculus_jaculus.JH725527.1                               1237998 1 +   9596543 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751 0 -    498745 C
e Equus_caballus.CM000403.2                               21373965 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041 0 -   4378816 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Allactaga_bullata.AllBul_scaffold_20030                    16813 1 -     61208 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4337 6 +     36723 A-G-TGA-G
s Acinonyx_jubatus.LLWD01001279.1                           811694 6 +   1699592 G-TATGT--
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18765 7 +     63021 A-T-TAACA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414221 6 +  29979442 g-tattt--
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214318 6 +    347723 g-tattt--
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16814 6 -     61208 A-A-TGA-A
i Allactaga_bullata.AllBul_scaffold_20030                I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46662 6 +     53615 A-G-TGA-G
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42607 6 +     44087 A-G-TGA-G
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15244 6 -     21945 A-G-TGA-G
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16917 6 +     32033 A-G-TGA-G
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71113 6 -     84148 A-G-TGA-G
i Alouatta_belzebul.k141_1011583                         I 50 C 0
s Alouatta_caraya.k141_1109140                               43352 6 -     78289 A-G-TGA-G
i Alouatta_caraya.k141_1109140                           I 56 C 0
s Alouatta_discolor.k141_2561099                             42791 6 +     55831 A-G-TGA-G
i Alouatta_discolor.k141_2561099                         I 49 C 0
s Alouatta_juara.k141_1687208                                41244 6 -     64179 A-G-TGA-G
i Alouatta_juara.k141_1687208                            I 52 C 0
s Alouatta_macconnelli.k141_361275                           22881 6 -     24835 A-G-TGA-G
i Alouatta_macconnelli.k141_361275                       I 51 C 0
s Alouatta_nigerrima.k141_376068                             39867 6 +     45454 A-G-TGA-G
i Alouatta_nigerrima.k141_376068                         I 54 C 0
s Alouatta_palliata.k141_638677                              45511 6 +     70886 A-G-TGA-G
i Alouatta_palliata.k141_638677                          C 0 I 1
s Alouatta_puruensis.k141_251022                              7691 6 +     30854 A-G-TGA-G
i Alouatta_puruensis.k141_251022                         I 55 C 0
s Alouatta_seniculus.k141_928287                             31827 6 +     42133 A-G-TGA-G
i Alouatta_seniculus.k141_928287                         I 52 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584055 5 +   2318259 A-A-TGA--
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175504 5 -    412891 A-A-TGA--
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49154 5 -     68529 A-A-TGA--
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   49565 6 -     65372 A-G-TGA-G
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43319 6 +     43593 A-G-TGA-G
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671332 6 +   5030052 a-g-tga-g
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22974 6 -     23494 A-G-TGA-G
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                8110 6 +      8415 A-G-TGA-G
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14850 6 -     32367 A-G-TGA-A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3796 5 -     15198 A-A-TGA--
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273575 6 +  21539123 A-G-TGA-G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9741 6 +     48076 A-G-TGA-G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4878 6 -     28759 A-G-TGA-G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32432 6 +     44353 A-G-TGA-G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47802 6 -     71267 A-G-TGA-G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21862 6 -     33135 A-G-TGA-G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5049 6 +     11645 A-G-TGA-G
i Avahi_laniger.k141_2756659                             C 0 I 1
s Avahi_peyrierasi.k141_1823318                               5055 6 -     19611 A-G-TGA-G
i Avahi_peyrierasi.k141_1823318                          C 0 I 1
s Balaenoptera_acutorostrata.KI537508.1                    7955883 5 -  23207421 A-G-TGA--
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3092 5 -      4711 A-G-TGA--
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85050 5 +    124022 A-A-TGA--
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20583 5 +    288883 A-A-TGA--
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354970 5 +  48749331 A-A-TGA--
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753538 5 +   1948126 A-A-TGA--
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543677 5 -  45695690 A-A-TGA--
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528701 5 -   4408762 A-A-TGA--
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6767 4 +     28062 A-G-TA---
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42061 4 -     91139 A-G-TA---
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19587 4 +     95584 A-G-TA---
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19500 4 +    119600 A-G-TA---
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9048 5 +     18648 A-G-TGA--
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8586 6 -     13885 A-G-TGA-G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             654 6 -      8861 A-G-TGA-G
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453047 6 + 189096842 A-G-TGA-G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                570 6 +      8664 A-G-TGA-G
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629875 5 +  17673402 A-G-Tga--
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664161 5 +   7040546 A-G-Tga--
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207821 5 +   1652518 A-G-Tga--
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504236 6 +  60362399 G-TATGT--
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7872 6 -     23171 G-TATGT--
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221215 6 +   9314153 g-tatgt--
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614350 6 +  59632846 g-tatgt--
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105931 6 -  63665305 g-tatgt--
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407767 5 -  46296322 A-A-TGA--
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590040 5 +  44709034 A-A-TGA--
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_108409                   6707 6 +      8835 A-C-CAA-T
i Capromys_pilorides.CapPil_scaffold_108409              I 458 C 0
s Carlito_syrichta.NW_007259797.1                           269142 3 +    496798 a-g-t----
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               4085 5 +      5315 A-A-TGA--
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75544 5 -    217609 A-G-TGA--
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994798 6 +  23392119 A-G-TGA-A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998240 6 +  23407841 A-G-tga-a
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61341 6 -     66877 A-G-TGA-A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3967 6 -     12580 A-G-TGA-G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42022 6 +     53515 A-G-TGA-G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369960 6 -  26074798 A-G-TGA-G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6849 6 -     34880 A-G-TGA-G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65944 6 -     89041 A-G-TGA-G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1073 3 -      5494 A-G-T----
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491021 5 -  27778364 A-G-tga--
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17854 5 +     27315 A-G-TGA--
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139838 6 -   4669795 a-g-tga-g
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43579 6 +     47900 A-G-TGA-G
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43411 6 -     44860 A-G-TGA-G
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43394 6 -    148725 A-G-TGA-G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25617 6 -     40656 A-G-TGA-G
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5586 6 +     20796 A-G-TGA-G
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10656 6 -     17524 A-G-TGA-G
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26377 6 -     34525 A-G-TGA-G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10207 6 -     25376 A-G-TGA-G
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362802 6 -  39242232 A-G-TGA-G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268514 6 +  21565898 A-G-TGA-G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30852 6 -     45857 A-G-TGA-G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25790 6 -     32606 A-G-TGA-G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1947 6 +      8499 A-G-TGA-G
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24348 6 +     70610 A-G-TGA-G
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21271 6 +     36323 A-G-TGA-G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11650 6 -     19938 A-G-TGA-G
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29467 6 -     33796 A-G-TGA-G
i Cheirogaleus_major.k141_666340                         C 0 I 1
s Cheirogaleus_medius.k141_759766                             3984 6 -     15404 A-G-TGA-G
i Cheirogaleus_medius.k141_759766                        C 0 I 1
s Cheracebus_lucifer.k141_2312002                             7850 4 -     32913 A-G-TA---
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18263 4 -     40346 A-G-TA---
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18518 4 +    216457 A-G-TA---
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18311 4 +     39636 A-G-TA---
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237262 6 -   2543920 a-g-tga-a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2896 4 +      5346 A-G-TG---
i Chiropotes_albinasus.k141_1946120                      C 0 I 4
s Chiropotes_israelita.k141_313004                           41395 4 -    112038 A-G-TA---
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6967 4 +     34062 A-G-TA---
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342166 6 +  18827391 A-G-TGA-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8712 6 -     44032 A-G-TGA-G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303491 6 - 135778131 a-g-tga-a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10711 6 +     15858 A-G-TAA-G
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            602287 6 -    839153 a-g-taa-g
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407937 6 -   2368649 a-g-tga-g
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377814 3 - 200372422 A-G-T----
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1361 6 -     84244 A-G-TGA-G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806086 5 +  53390261 A-G-TAA--
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1661 5 -      8242 A-G-TGA--
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41082 6 -     83289 G-G-TGA-G
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113531 6 - 224834208 G-g-tga-g
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3155 6 +     87169 G-TATAT--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643596 6 -   1526836 A-G-TGG-A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16250 6 +     50838 G-C-CTA-A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 4297 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2718 6 +     36344 A-G-TGA-A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26488 6 +     75252 A-G-TGA-A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2108993 6 -   2246927 a-g-tga-g
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291421 6 +  12879189 A-A-TGA-G
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Delphinapterus_leucas.KZ290073.1                        18624212 5 -  35494412 A-G-TGA--
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863534 5 -  20541912 A-A-TAA--
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663312 5 -   1390856 A-G-TGa--
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138098 5 -    198055 A-G-TGA--
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97294 6 -    115145 A-G-TGA-A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949157 6 -  37912305 A-g-tga-a
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4104 6 -     10735 A-G-TGA-A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8763 6 +     14636 A-G-TGA-A
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853136 6 - 111700974 C-g-tga-g
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5122 3 +     19438 ----tga--
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238441 5 -    607251 A-A-TGC--
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107373 4 -  10337057 ----tga-g
i Elephantulus_edwardii.JH947257.1                       I 226 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29805 6 +    110024 g-g-tga-g
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11780 6 +     18970 G-g-tga-g
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914972 6 +  41312741 g-tattc--
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577163 5 +  14770903 A-G-TGA--
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                               261692 6 +  21539334 A-G-TGA-G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63762 5 -    133382 A-G-TGA--
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3979 5 +      7672 A-G-TGA--
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13593 6 -     24895 A-G-TGA-G
i Eulemur_albifrons.k141_51491                           C 0 I 1
s Eulemur_collaris.k141_601111                               41302 6 -     70999 A-G-TGA-G
i Eulemur_collaris.k141_601111                           C 0 I 1
s Eulemur_coronatus.k141_384460                              85264 6 +    112731 A-G-TGA-G
i Eulemur_coronatus.k141_384460                          C 0 I 1
s Eulemur_flavifrons.k141_433119                             41837 6 +     68309 A-G-TGA-G
i Eulemur_flavifrons.k141_433119                         C 0 I 1
s Eulemur_fulvus.k141_636316                                 52159 6 -     65740 A-G-TGA-G
i Eulemur_fulvus.k141_636316                             C 0 I 1
s Eulemur_macaco.k141_1562045                                22792 6 -     75513 A-G-TGA-G
i Eulemur_macaco.k141_1562045                            C 0 I 1
s Eulemur_mongoz.k141_232305                                 46985 6 -     97555 A-G-TGA-G
i Eulemur_mongoz.k141_232305                             C 0 I 1
s Eulemur_rubriventer.k141_1423786                            3710 6 +     30972 A-G-TGA-G
i Eulemur_rubriventer.k141_1423786                       C 0 I 1
s Eulemur_rufus.k141_514691                                  41432 6 -     52037 A-G-TGA-G
i Eulemur_rufus.k141_514691                              C 0 I 1
s Eulemur_sanfordi.k141_1122526                              57836 6 -    111500 A-G-TGA-G
i Eulemur_sanfordi.k141_1122526                          C 0 I 1
s Felis_catus.CM001381.2                                 186245607 6 - 206538554 G-TATGT--
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115392 6 - 205367284 G-TATGT--
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26494 6 -     30238 G-TATGT--
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123364 5 -    137831 A-G-TTA--
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6909 5 +     22493 A-G-TTA--
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18960 5 -     32986 A-G-TTA--
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17917 6 +     18121 A-G-TGA-T
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90120 5 -     95226 A-A-TGA--
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33036 6 -     36801 A-G-TGA-A
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4654 6 -      8343 A-G-TGA-G
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253665 6 - 186649187 a-g-tga-g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     534 6 -     78134 A-G-TGA-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13519 6 -     40692 A-G-TGA-G
i Hapalemur_alaotrensis.k141_330369                      C 0 I 1
s Hapalemur_gilberti.k141_646465                             34921 6 +     49394 A-G-TAA-G
i Hapalemur_gilberti.k141_646465                         C 0 I 1
s Hapalemur_griseus.k141_763500                              59790 6 -     66874 A-G-TGA-G
i Hapalemur_griseus.k141_763500                          C 0 I 1
s Hapalemur_meridionalis.k141_258450                          8663 6 -     42923 A-G-TGA-G
i Hapalemur_meridionalis.k141_258450                     C 0 I 1
s Hapalemur_occidentalis.k141_578367                         15663 6 -     53142 A-G-TGA-G
i Hapalemur_occidentalis.k141_578367                     C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585                29632 6 -    327341 G-TATGT--
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7874 5 +     48891 A-A-TGA--
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1925891 6 -  22651954 a-g-tga-a
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6475 5 -     36432 A-G-TGA--
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49642 5 +     49977 A-G-TGA--
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141672 6 -    630532 A-G-TGA-G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68551 6 +     83186 G-TATGT--
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70191 6 +    143317 A-T-TGA-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4702 6 +     12352 A-G-TGA-G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11886 6 +     55766 A-G-TGA-G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051484 6 + 191637585 A-G-TGA-G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800362 6 +  11177569 A-G-TGA-G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385609 6 +   7955117 a-a-tga-a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1172 6 +     11955 A-G-TGA-G
i Indri_indri.k141_2415743                               C 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_69447                1999 5 -     16823 A-A-TGA--
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1237999 6 +   9596543 a-a-tga-a
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64483 5 -     97402 A-G-TGA--
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42117 6 +    110728 A-G-TGA-G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61027 5 -     65777 T-G-TGA--
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758312 6 +  30322482 A-G-TGA-G
i Lemur_catta.scaffold_24                                C 0 I 1
s Leontocebus_fuscicollis.k141_2994775                        3032 6 -     13097 A-G-TGA-G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2787 6 +      5940 A-G-TGA-G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2617 6 -      5717 A-G-TGA-G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     8984 6 -     11567 A-G-TGA-G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10365 6 -     12945 A-G-TGA-G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7841 6 +     29618 A-G-TGA-G
i Lepilemur_ankaranensis.k141_567626                     C 0 I 1
s Lepilemur_dorsalis.k141_387009                              7837 6 +     31569 C-G-TGA-G
i Lepilemur_dorsalis.k141_387009                         C 0 I 1
s Lepilemur_ruficaudatus.k141_330196                          7849 6 +     24756 A-A-TGA-G
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7847 6 +     16388 A-G-TGA-G
i Lepilemur_septentrionalis.k141_360456                  C 0 I 1
s Leptonychotes_weddellii.KB714746.1                        812368 6 -   3914936 g-tattt--
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16692 5 +     24238 --G-TGA-G
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333519 5 +    662738 A-G-TGA--
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               331796 6 -   1826925 A-G-TGA-G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9121 5 +     19643 A-G-TTA--
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042782 5 -   6120653 A-G-TTA--
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41613505 6 +  59628241 g-tatgt--
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44113 6 -     61512 A-G-TGA-G
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371773 6 -  60120075 A-G-TGA-G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24026 6 +     30207 A-G-TGA-G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21129 6 -     24934 A-G-TGA-G
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23979 6 +     30527 A-G-TGA-G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35168 3 -     50087 -----GA-G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44940 6 +     51645 A-G-TGA-G
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414109 6 - 187317192 A-G-Tga-g
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398332 6 +  25927173 a-g-tga-g
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47496 6 -     62418 A-G-TGA-G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                24152 6 +     24253 A-G-TGA-G
i Macaca_radiata.k141_3557992                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43971 6 +     59329 A-G-TGA-G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269898 3 +    668171 -----GA-G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  154 6 +      1732 A-G-TGA-G
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1683 6 +     17132 A-G-TGA-G
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222085 3 -    270270 ----TGA--
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321183 6 +  24302211 A-G-TGA-G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356015 6 -    752769 A-G-TGA-G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672395 7 -    737560 AAGGTGT--
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219682 7 +    317179 AAGGTGT--
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499830 6 +  40650429 a-a-tga-a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149241 5 +    207569 A-C-TGA--
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             24861 6 -     74585 G-TATTC--
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47883 7 -    140813 A-T-TAACA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428081 6 +  29670104 G-G-Tga-g
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80065 5 +     93471 A-G-TGA--
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9158 5 +     17804 A-G-TGA--
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9660 5 -     12984 A-G-TGA--
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17974 5 -     26561 A-A-TGA--
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983451 4 +  93316391 ----tga-g
i Microcebus_murinus.CM007674.1                          C 0 I 1
s Microgale_talazaci.MicTal_scaffold_6613                    44231 6 +    145209 A-G-TGA-G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183475 5 +    200668 A-A-TGA--
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961217 6 +  27267610 g-g-tga-g
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361573 5 -   8254450 G-G-TGA--
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40474 5 -     48117 G-G-TGA--
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21195 6 -     27822 A-G-TGA-G
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7375 6 +     27589 G-TATTT--
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51242 4 -     62432 ----TGA-G
i Mirza_zaza.k141_766280                                 C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_103                   351955 5 +    437263 A-G-TGA--
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177635 5 +    366855 A-G-TGA--
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23169 5 -     82753 A-A-TGA--
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17385 6 -     63510 G-TATGT--
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37510 5 +     47283 A-G-TGA--
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35591749 7 + 120012414 a-t-taaca
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686108 7 + 129401213 a-t-taaca
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58215996 7 +  89631738 a-t-taaca
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495428 7 + 130317789 a-t-taaca
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81616 6 -     86153 A-G-TGA-A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354008 6 +  14710649 g-tattc--
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791559 5 +  10118263 T-G-TAA--
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385919 5 +   6019432 t-g-tgt--
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381740 3 +   4330536 t-g-t----
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          568 5 +     18357 T-G-TGC--
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118444 6 +    130748 A-G-TGA-G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             944905 6 +   3037898 a-t-aat-g
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              27861 6 +     34575 A-G-TGA-G
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467971 6 -  31847680 g-tattt--
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226124 5 -   7148211 A-G-TGA--
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126422 5 -    149072 G-G-TGA--
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52594 6 -    132029 A-G-TGA-G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8689 6 -     16345 A-G-TGA-G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14574 6 +     22201 A-G-TGA-G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412795 6 -  22158432 A-G-TGA-G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24972 6 -     54323 A-G-TGA-G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197098 6 +   9404916 g-tatgt--
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635117 5 + 196305487 A-G-TTA--
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1875 5 -      3937 A-G-TTA--
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563356 5 - 199412804 A-G-TTA--
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550057 5 -   3988456 --G-TGA-G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11052909 6 -  11899542 a-c-cta-a
i Octodon_degus.JH651603.1                               I 6585 C 0
s Odobenus_rosmarus.KB229312.1                             1450568 6 +   2017862 g-tattt--
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435012 5 -    630418 A-A-TGT--
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13004 5 +    150152 A-A-TGA--
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91576 6 -    140218 G-G-TGA-G
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2435 6 -     41509 G-G-TGG-G
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095394 5 +  10937097 A-G-TGA--
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12466 6 -     14239 A-T-TAA-G
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102529 5 - 174332312 --g-tga-g
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38144 6 +    559221 G-tatgt--
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38517 5 -     51505 A-G-TTA--
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351520 5 +   1103335 a-g-tta--
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402994 5 -  44047080 A-A-TGA--
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3513 5 +     17875 A-A-TGA--
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471690 6 - 189151597 A-G-TGa-g
i Pan_troglodytes.CM009242.2                             C 0 I 5
s Panthera_onca.PanOnc_flattened_line_3271                   23315 6 -    230217 G-TATGT--
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460641 6 -  18783137 G-TATGT--
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971361 6 +   8748460 G-TATGT--
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614436 5 +   2937107 A-A-TGA--
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242023 6 - 183742232 a-g-tga-g
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8487 6 +     21308 A-G-TGA-G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291059 6 -  20919399 A-G-TGA-G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21142 6 -     27687 A-G-TGA-G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14278 6 +     16796 A-G-TGA-G
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21088 6 -     23640 A-G-TGA-G
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13954 6 +     78924 G-TGTGT--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24801 5 +     31479 A-G-TTA--
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17165 5 -     24908 A-G-TTA--
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         525 6 +      9367 A-G-TGA-A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245656 6 +  18517816 G-G-TGA-G
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30742 6 -     56120 A-G-TGA-A
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11252 5 -     15039 A-G-TGA--
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1309 6 +     55023 A-G-TGA-G
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          860 6 -     89929 A-G-TGA-G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1448 6 +     40849 A-G-TGA-G
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253115 6 +  14605196 a-g-tga-g
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1690 5 +     22231 a-g-tga--
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63756 4 +    207309 A-G-TA---
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4850 4 -     25401 A-G-TA---
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30591 4 +     58159 A-G-TA---
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30867 4 +     63561 A-G-TA---
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30630 4 +     51148 A-G-TA---
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555597 4 -   4542175 A-G-TA---
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30614 4 +     51125 A-G-TA---
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3336 5 -      8168 A-G-TGA--
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7018 4 +     39866 A-G-TA---
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2103 4 -      9282 A-G-TA---
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41507 4 -     87950 A-G-TA---
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41900 4 -     88961 A-G-TA---
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6599 4 -     39403 A-G-TA---
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41551 4 +     87928 A-G-TA---
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6596 4 -     60166 A-G-TA---
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13532 4 -     67232 A-G-TA---
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41448 4 -     90634 A-G-TA---
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42916 4 +     89403 A-G-TA---
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176814 6 - 189387572 a-g-tga-g
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191631 6 -   9816681 A-G-TGA-G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26445 6 +     69807 A-G-TGA-A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43637 6 -     80239 A-G-TGA-A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981467 6 +   4620579 A-G-tga-g
i Prolemur_simus.MPIZ01000396.1                          C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                    1564933 6 -   2598838 A-G-TGa-g
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 1
s Propithecus_coronatus.k141_209299                           2569 6 -      7103 A-G-TGA-G
i Propithecus_coronatus.k141_209299                      C 0 I 1
s Propithecus_diadema.k141_153680                             3166 6 -     11706 A-G-TGA-G
i Propithecus_diadema.k141_153680                        C 0 I 1
s Propithecus_edwardsi.k141_635656                            6902 6 -     30655 A-G-TGA-G
i Propithecus_edwardsi.k141_635656                       C 0 I 1
s Propithecus_perrieri.k141_1496898                          33227 6 +     46564 A-G-TGA-G
i Propithecus_perrieri.k141_1496898                      C 0 I 1
s Propithecus_tattersalli.k141_1127767                       93498 6 -     98465 A-G-TGA-G
i Propithecus_tattersalli.k141_1127767                   C 0 I 1
s Propithecus_verreauxi.k141_1047036                          7135 6 +     35169 A-G-TGA-G
i Propithecus_verreauxi.k141_1047036                     C 0 I 1
s Psammomys_obesus.NESX01036366.1                            35456 7 +     52041 a-t-taaca
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50517 5 -     66298 A-G-tga--
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3575 6 -     18639 G-TATTC--
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839772 3 -  28871421 ----tga--
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536281 3 -   4952924 ----tga--
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18097955 6 +  38429054 G-TATGT--
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25819 6 +     91421 A-G-TGA-G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152311 3 -   7812017 -----GA-G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6688 3 +     72585 -----GA-G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51933 5 +     55069 A-A-TGT--
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021353 7 -  90668790 a-t-taaca
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913659 5 +   3329780 A-G-Tga--
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              389 6 +      7119 A-G-TGA-G
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104120999 6 + 195417433 A-G-tga-g
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235240 6 -   7961872 A-G-TGA-G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73694 3 -    116970 ----TGA--
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2894 6 +     27962 A-G-TGA-G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2789 6 +      6077 A-G-TGA-G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2880 6 +      5971 A-G-TGA-G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2820 6 +      5932 A-G-TGA-G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1145 6 -      4390 A-G-TGA-G
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390578 6 - 209938924 A-G-TGA-G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2769 6 +      5979 A-G-TGA-G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3512 6 -      4301 A-G-TGA-G
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6586 5 +     16473 A-A-TGA--
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107916 6 + 121099817 a-g-tta-g
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29478 6 -     47369 A-G-TTA-G
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29867 6 -     79414 A-G-TTA-G
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26559 6 -     34454 A-G-TTA-G
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13965 6 -     22428 A-G-TTA-G
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29110 6 -     47109 A-G-TTA-G
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237177 6 +   5703754 A-G-TGA-G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6767 6 +     21866 A-G-TGA-G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114876 5 +    313613 A-G-TAA--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24132 6 +     27374 A-G-TGA-G
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27650 6 +     58920 A-G-TGA-G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14146 6 -     45317 A-G-TGA-G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21805 6 -     42441 A-G-TGA-G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24485 6 -     29113 A-G-TGA-G
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27554 6 -     48123 A-G-TGA-G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48064 6 +     77746 G-A-TAA-G
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857190 5 -   1910179 A-G-TGA--
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867188 6 +   3870691 a-a-tga-a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5342 6 -     97271 G-TAttt--
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123792 6 +    196729 G-TATGT--
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6640005 5 +  69701581 A-g-tga--
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390056 6 +   1523678 A-G-TGA-G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12497 5 +     22964 A-G-TGG--
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1560 6 +      5583 A-G-TGA-G
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190473 5 +    199430 A-G-TGA--
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104425 5 -    539355 A-G-TGA--
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5768 3 +      6850 A-G-T----
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5819 3 +     20590 A-G-T----
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352011 6 - 186847797 a-g-tga-g
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23069 6 -     33621 A-G-TAA-A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18686 4 -     31044 A-G---A-G
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478543 5 -    610378 A-A-TGA--
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19691 6 +     26378 A-G-TGA-G
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32360 6 -     78344 A-G-TGA-G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19012 6 +     25722 A-G-TGA-G
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27311 6 -     62838 A-G-TGA-G
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s Trachypithecus_geei.k141_1001272                           27359 4 +     46913 ----TGA-G
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s Trachypithecus_germaini.k141_57262                          8165 6 -     28527 A-G-TGA-G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29250 6 -     64340 A-G-TGA-G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27287 6 -     63452 A-G-TGA-G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8730 6 +     22490 A-G-TGA-G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2158 6 -      6147 A-G-TGA-G
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9062 6 -     13050 A-G-TGA-G
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254302 6 -   6242583 A-G-TGA-G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         328 4 +     19340 ----TGA-G
i Trachypithecus_pileatus.k141_2622778                   I 1 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172202 5 -    200418 A-A-CAA--
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832714 5 -   4065304 t-t-tta--
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7030 5 -     70247 T-T-TTA--
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360133 5 -  33153633 A-G-TGA--
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    1333 5 -     21056 A-A-TGA--
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180727 6 +   5085361 g-tattt--
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24111 6 -     30710 A-G-TGA-G
i Varecia_rubra.k141_787544                              C 0 I 1
s Varecia_variegata.k141_289850                              23018 6 -    147434 A-G-TGA-G
i Varecia_variegata.k141_289850                          C 0 I 1
s Vicugna_pacos.KN270157.1                                   75210 4 +   5488506 --G-Tga--
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103866 6 -    112863 T-TATGT--
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172966 6 -    224448 A-A-TGA-A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27766 6 -     86975 G-TATTT--
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2247 6 +      2695 T-A-TGA-A
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Trichechus_manatus.JH594705.1                            6479316 0 -  10818551 C
e Loxodonta_africana.GL010049.1                           39079856 0 +  43346337 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751 0 -    498745 C
e Equus_caballus.CM000403.2                               21373965 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041 0 -   4378816 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4343 5 +     36723 TTC-TT
s Acinonyx_jubatus.LLWD01001279.1                           811700 1 +   1699592 -----T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_21377                     18772 5 +     63021 TTT-TT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414227 1 +  29979442 -----t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                            214324 1 +    347723 -----t
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 217
s Allactaga_bullata.AllBul_scaffold_20030                    16820 5 -     61208 TTT-TT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   46668 5 +     53615 TTC-TT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42613 5 +     44087 TTC-TT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15250 5 -     21945 TTC-TT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16923 5 +     32033 TTC-TT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71119 3 -     84148 T---TT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43358 3 -     78289 T---TT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42797 3 +     55831 T---TT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41250 3 -     64179 T---TT
i Alouatta_juara.k141_1687208                            C 0 I 4
s Alouatta_macconnelli.k141_361275                           22887 3 -     24835 T---TT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39873 3 +     45454 T---TT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45518 3 +     70886 T---TT
i Alouatta_palliata.k141_638677                          I 1 C 0
s Alouatta_puruensis.k141_251022                              7697 3 +     30854 T---TT
i Alouatta_puruensis.k141_251022                         C 0 I 4
s Alouatta_seniculus.k141_928287                             31833 3 +     42133 T---TT
i Alouatta_seniculus.k141_928287                         C 0 I 4
s Ammotragus_lervia.NIVO01071767.1                         1584060 1 +   2318259 -----C
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      175509 1 -    412891 -----A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_21030             49159 1 -     68529 -----G
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 1
s Aotus_azarae.k141_118258                                   49571 3 -     65372 G---TT
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43325 3 +     43593 G---TT
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671338 3 +   5030052 g---tt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22980 3 -     23494 G---TT
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                8116 3 +      8415 G---TT
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14856 3 -     32367 --T-TT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3801 1 -     15198 -----A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 1
s Ateles_geoffroyi_b.tarseq_1536                               273581 3 +  21539123 T---TT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9747 3 +     48076 T---TT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4884 3 -     28759 T---TT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32438 3 +     44353 T---TT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47808 3 -     71267 T---TT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21868 3 -     33135 T---TT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5056 5 +     11645 TAT-AT
i Avahi_laniger.k141_2756659                             I 1 C 0
s Avahi_peyrierasi.k141_1823318                               5062 5 -     19611 TAT-AT
i Avahi_peyrierasi.k141_1823318                          I 1 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955888 1 -  23207421 -----G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 1
s Balaenoptera_bonaerensis.DF507193.1                         3097 1 -      4711 -----G
i Balaenoptera_bonaerensis.DF507193.1                    C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_7278                     85055 1 +    124022 -----C
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 1
s Bison_bison.KN261452.1                                     20588 1 +    288883 -----G
i Bison_bison.KN261452.1                                 C 0 I 1
s Bos_indicus.CM003047.1                                  20354975 1 +  48749331 -----G
i Bos_indicus.CM003047.1                                 C 0 I 1
s Bos_mutus.JH880303.1                                      753543 1 +   1948126 -----G
i Bos_mutus.JH880303.1                                   C 0 I 1
s Bos_taurus.CM000203.6                                   27543682 1 -  45695690 -----G
i Bos_taurus.CM000203.6                                  C 0 I 1
s Bubalus_bubalis.KI419123.1                               1528706 1 -   4408762 -----G
i Bubalus_bubalis.KI419123.1                             C 0 I 1
s Cacajao_ayresi.k141_96119                                   6771 2 +     28062 ----TT
i Cacajao_ayresi.k141_96119                              C 0 I 3
s Cacajao_calvus.k141_89051                                  42065 2 -     91139 ----TT
i Cacajao_calvus.k141_89051                              C 0 I 3
s Cacajao_hosomi.k141_81245                                  19591 2 +     95584 ----TT
i Cacajao_hosomi.k141_81245                              C 0 I 3
s Cacajao_melanocephalus.k141_619699                         19504 2 +    119600 ----TT
i Cacajao_melanocephalus.k141_619699                     C 0 I 3
s Callibella_humilis.k141_1233062                             9053 3 +     18648 G---TT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8592 2 -     13885 T----T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             660 3 -      8861 G---TT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453053 3 + 189096842 G---TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                576 3 +      8664 G---TT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629880 1 +  17673402 -----g
i Camelus_bactrianus.KN276810.1                          C 0 I 5
s Camelus_dromedarius.KN272107.1                           4664166 1 +   7040546 -----g
i Camelus_dromedarius.KN272107.1                         C 0 I 5
s Camelus_ferus.KB017975.1                                 1207826 1 +   1652518 -----g
i Camelus_ferus.KB017975.1                               C 0 I 5
s CanFam4.chr16                                           42504242 1 +  60362399 -----T
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7878 1 -     23171 -----T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                          221221 1 +   9314153 -----t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            41614356 1 +  59632846 -----t
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            45105937 1 -  63665305 -----t
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Capra_aegagrus.CM003241.1                               27407772 1 -  46296322 -----C
i Capra_aegagrus.CM003241.1                              C 0 I 1
s Capra_hircus.CM004588.1                                 26590045 1 +  44709034 -----C
i Capra_hircus.CM004588.1                                C 0 I 1
s Capromys_pilorides.CapPil_scaffold_108409                   6713 5 +      8835 TTT-TT
i Capromys_pilorides.CapPil_scaffold_108409              C 0 I 1
s Carlito_syrichta.NW_007259797.1                           269145 3 +    496798 --t-tg
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               4090 1 +      5315 -----A
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     75549 1 -    217609 -----A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cavia_aperea.AVPZ01000300.1                              4994804 5 +  23392119 TTC-TT
i Cavia_aperea.AVPZ01000300.1                            C 0 I 1
s Cavia_porcellus.DS562891.1                               4998246 5 +  23407841 tta-tt
i Cavia_porcellus.DS562891.1                             C 0 I 1
s Cavia_tschudii.CavTsc_scaffold_23560                       61347 5 -     66877 TTA-TT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 1
s Cebuella_niveiventris.k141_592277                           3973 3 -     12580 G---TT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42028 3 +     53515 G---TT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369966 3 -  26074798 T---TT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6855 3 -     34880 T---TT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65950 3 -     89041 T---TT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1076 3 -      5494 --T-TG
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491026 1 -  27778364 -----c
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17859 1 +     27315 -----C
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 1
s Cercocebus_atys.KQ010504.1                                139844 5 -   4669795 ttc-tt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43585 5 +     47900 TTC-TT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43417 5 -     44860 TTC-TT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43400 5 -    148725 TTC-TT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25623 5 -     40656 TTC-TT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5592 5 +     20796 TTC-TT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10662 5 -     17524 TTC-TT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26383 5 -     34525 TTC-TT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10213 5 -     25376 TTC-TT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362808 5 -  39242232 TTC-TT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268520 5 +  21565898 TTC-TT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30858 5 -     45857 TTC-TT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25796 5 -     32606 TTC-TT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1953 5 +      8499 TTC-TT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24354 5 +     70610 TTC-TT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21277 5 +     36323 TTC-TT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11656 5 -     19938 TTT-TT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 1
s Cheirogaleus_major.k141_666340                             29474 5 -     33796 TAT-AG
i Cheirogaleus_major.k141_666340                         I 1 C 0
s Cheirogaleus_medius.k141_759766                             3991 5 -     15404 TAT-AT
i Cheirogaleus_medius.k141_759766                        I 1 C 0
s Cheracebus_lucifer.k141_2312002                             7854 2 -     32913 ----TT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18267 2 -     40346 ----TT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18522 2 +    216457 ----TT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18315 2 +     39636 ----TT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237268 5 -   2543920 ttt-tt
i Chinchilla_lanigera.JH722012.1                         C 0 I 1
s Chiropotes_albinasus.k141_1946120                           2904 2 +      5346 ----TT
i Chiropotes_albinasus.k141_1946120                      I 4 C 0
s Chiropotes_israelita.k141_313004                           41399 2 -    112038 ----TT
i Chiropotes_israelita.k141_313004                       C 0 I 4
s Chiropotes_sagulatus.k141_1113111                           6971 2 +     34062 ----TT
i Chiropotes_sagulatus.k141_1113111                      C 0 I 4
s Chlorocebus_aethiops.ctg25                                342172 5 +  18827391 TTC-TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8718 5 -     44032 TTC-TT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303497 5 - 135778131 ttc-tt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 10717 5 +     15858 TTT-Tt
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 2256
s Choloepus_hoffmanni.KN194906.1                            602293 5 -    839153 ttt-tt
i Choloepus_hoffmanni.KN194906.1                         C 0 I 2256
s Colobus_angolensis.KN981557.1                             407943 5 -   2368649 ttc-tt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377817 5 - 200372422 TCT-TT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1367 5 -     84244 TTC-TT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806091 1 +  53390261 -----T
i Condylura_cristata.JH655891.1                          C 0 I 6
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1666 1 -      8242 -----G
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_14425                 41088 5 -     83289 GTT-TC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 1
s Cricetulus_griseus.LT883664.1                          213113537 5 - 224834208 ttt-tc
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3161 1 +     87169 -----T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    643602 5 -   1526836 TTT-TT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16256 5 +     50838 TTT-TT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 1
s Cuniculus_paca.CunPac_flattened_line_7025                   2724 4 +     36344 TTT-T-
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26494 5 +     75252 ATT-TT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 1
s Dasypus_novemcinctus.JH564415.1                          2108999 5 -   2246927 ttt-tt
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Daubentonia_madagascariensis.ctg71                        291428 5 +  12879189 TAT-AT
i Daubentonia_madagascariensis.ctg71                     I 1 C 0
s Delphinapterus_leucas.KZ290073.1                        18624217 1 -  35494412 -----G
i Delphinapterus_leucas.KZ290073.1                       C 0 I 1
s Desmodus_rotundus.KZ672289.1                            11863539 1 -  20541912 -----A
i Desmodus_rotundus.KZ672289.1                           C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663317 1 -   1390856 -----g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                  138103 1 -    198055 -----C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Dinomys_branickii.DinBra_scaffold_10381                    97300 5 -    115145 TTG-TT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 1
s Dipodomys_ordii.KN672350.1                              18949163 5 -  37912305 tat-tt
i Dipodomys_ordii.KN672350.1                             C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_89095                   4110 5 -     10735 TAT-TT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_80628                  8769 5 +     14636 GTT-TT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 1
s Echinops_telfairi.JH980293.1                            62853142 4 - 111700974 tt--tt
i Echinops_telfairi.JH980293.1                           C 0 I 2
s Eidolon_helvum.AWHC01266696.1                               5125 1 +     19438 -----a
i Eidolon_helvum.AWHC01266696.1                          C 0 I 1
s Elaphurus_davidianus.JRFZ01104969.1                       238446 1 -    607251 -----G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 1
s Elephantulus_edwardii.JH947257.1                         9107377 4 -  10337057 tt--tt
i Elephantulus_edwardii.JH947257.1                       C 0 I 6
s Ellobius_lutescens.LOEQ01008920.1                          29811 5 +    110024 ttt-tc
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01026522.1                           11786 5 +     18970 ttt-tc
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               24914978 1 +  41312741 -----t
i Enhydra_lutris.KZ291758.1                              C 0 I 13
s Eptesicus_fuscus.JH977646.1                             12577168 1 +  14770903 -----G
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Erythrocebus_patas.Contig38                               261698 5 +  21539334 TTC-TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63767 1 -    133382 -----G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_118172             3984 1 +      7672 -----G
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 I 1
s Eulemur_albifrons.k141_51491                               13600 5 -     24895 TAT-AT
i Eulemur_albifrons.k141_51491                           I 1 C 0
s Eulemur_collaris.k141_601111                               41309 5 -     70999 TAT-AT
i Eulemur_collaris.k141_601111                           I 1 C 0
s Eulemur_coronatus.k141_384460                              85271 5 +    112731 TAT-AT
i Eulemur_coronatus.k141_384460                          I 1 C 0
s Eulemur_flavifrons.k141_433119                             41844 5 +     68309 TAT-AT
i Eulemur_flavifrons.k141_433119                         I 1 C 0
s Eulemur_fulvus.k141_636316                                 52166 5 -     65740 TAT-AT
i Eulemur_fulvus.k141_636316                             I 1 C 0
s Eulemur_macaco.k141_1562045                                22799 5 -     75513 TAT-AT
i Eulemur_macaco.k141_1562045                            I 1 C 0
s Eulemur_mongoz.k141_232305                                 46992 5 -     97555 TAT-AT
i Eulemur_mongoz.k141_232305                             I 1 C 0
s Eulemur_rubriventer.k141_1423786                            3717 5 +     30972 TAT-AT
i Eulemur_rubriventer.k141_1423786                       I 1 C 0
s Eulemur_rufus.k141_514691                                  41439 5 -     52037 TAT-AT
i Eulemur_rufus.k141_514691                              I 1 C 0
s Eulemur_sanfordi.k141_1122526                              57843 5 -    111500 TAT-AT
i Eulemur_sanfordi.k141_1122526                          I 1 C 0
s Felis_catus.CM001381.2                                 186245613 1 - 206538554 -----T
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                          185115398 1 - 205367284 -----T
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_31944                 26500 1 -     30238 -----T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 1
s Galago_moholi.ctg3793                                     123369 5 -    137831 TAT-AT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6914 5 +     22493 TAT-AT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18965 5 -     32986 TAT-AT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17923 5 +     18121 TTT-TT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 12
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90125 1 -     95226 -----G
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 1
s Glis_glis.GliGli_scaffold_33859                            33042 5 -     36801 TTT-TT
i Glis_glis.GliGli_scaffold_33859                        C 0 I 1
s Gorilla_beringei.k141_3358147                               4660 5 -      8343 TTC-TT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253671 5 - 186649187 ttc-tt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     540 4 -     78134 TTT--T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 1
s Hapalemur_alaotrensis.k141_330369                          13526 5 -     40692 TAT-AT
i Hapalemur_alaotrensis.k141_330369                      I 1 C 0
s Hapalemur_gilberti.k141_646465                             34928 5 +     49394 TAT-AT
i Hapalemur_gilberti.k141_646465                         I 1 C 0
s Hapalemur_griseus.k141_763500                              59797 5 -     66874 TAT-AT
i Hapalemur_griseus.k141_763500                          I 1 C 0
s Hapalemur_meridionalis.k141_258450                          8670 5 -     42923 TAT-AT
i Hapalemur_meridionalis.k141_258450                     I 1 C 0
s Hapalemur_occidentalis.k141_578367                         15670 5 -     53142 TAT-AT
i Hapalemur_occidentalis.k141_578367                     I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29638 1 -    327341 -----T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7879 1 +     48891 -----C
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 1
s Heterocephalus_glaber.JH602082.1                         1925897 5 -  22651954 gtt-tt
i Heterocephalus_glaber.JH602082.1                       C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6480 1 -     36432 -----G
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_23202               49647 1 +     49977 -----G
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 1
s Hoolock_leuconedys.ctg274                                    141678 5 -    630532 TTC-TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68557 1 +     83186 -----T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70197 5 +    143317 TAT-TT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 1
s Hylobates_agilis.k141_1155965                               4708 5 +     12352 TTC-TT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11892 5 +     55766 TTC-TT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051490 5 + 191637585 TTC-TT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800368 5 +  11177569 TTC-TT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385615 5 +   7955117 att-tt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_2415743                                    1179 5 +     11955 TAT-AT
i Indri_indri.k141_2415743                               I 1 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2004 1 -     16823 -----G
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 1
s Jaculus_jaculus.JH725527.1                               1238005 5 +   9596543 ttt-tt
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_3970                 64488 1 -     97402 -----G
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 1
s Lagothrix_lagothricha.k141_246028                          42123 3 +    110728 G---TT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61032 1 -     65777 -----G
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 1
s Lemur_catta.scaffold_24                                 14758319 5 +  30322482 TAT-AT
i Lemur_catta.scaffold_24                                I 1 C 0
s Leontocebus_fuscicollis.k141_2994775                        3038 3 -     13097 T---TT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2793 3 +      5940 T---TT
i Leontocebus_illigeri.k141_2951200                      C 0 I 1
s Leontocebus_nigricollis.k141_3905062                        2623 3 -      5717 T---TT
i Leontocebus_nigricollis.k141_3905062                   C 0 I 1
s Leontopithecus_chrysomelas.k141_1327670                     8990 3 -     11567 T---TT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10371 3 -     12945 T---TT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7848 5 +     29618 TAT-AT
i Lepilemur_ankaranensis.k141_567626                     I 1 C 0
s Lepilemur_dorsalis.k141_387009                              7844 5 +     31569 TAT-AT
i Lepilemur_dorsalis.k141_387009                         I 1 C 0
s Lepilemur_ruficaudatus.k141_330196                          7855 3 +     24756 --T-AT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7854 5 +     16388 TAT-AT
i Lepilemur_septentrionalis.k141_360456                  I 1 C 0
s Leptonychotes_weddellii.KB714746.1                        812374 1 -   3914936 -----t
i Leptonychotes_weddellii.KB714746.1                     C 0 I 3
s Lepus_americanus.LepAme_scaffold_56121                     16697 5 +     24238 TTT-TT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 1
s Lipotes_vexillifer.KE559953.1                             333524 1 +    662738 -----G
i Lipotes_vexillifer.KE559953.1                          C 0 I 1
s Lophocebus_aterrimus.ctg367                               331802 5 -   1826925 TTC-TT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9126 5 +     19643 TAT-AT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042787 5 -   6120653 TAT-AT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079856 4 +  43346337 tt--tt
i Loxodonta_africana.GL010049.1                          C 0 I 1
s Lycaon_pictus.CM007581.1                                41613511 1 +  59628241 -----t
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_1757516                              44119 5 -     61512 TTC-TT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371779 5 -  60120075 TTC-TT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24032 5 +     30207 TTC-TT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21135 5 -     24934 TTC-TT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23985 5 +     30527 TTC-TT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35171 5 -     50087 TTC-AT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44946 5 +     51645 TTC-TT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414115 5 - 187317192 ttc-tt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398338 5 +  25927173 ttc-tt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47502 5 -     62418 TTC-TT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                24158 5 +     24253 TTC-TT
i Macaca_radiata.k141_3557992                            C 0 I 22
s Macaca_siberu.k141_2185972                                 43977 5 +     59329 TTC-TT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269901 5 +    668171 TTC-TT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  160 5 +      1732 TTC-TT
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1689 5 +     17132 TTC-TT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222088 1 -    270270 -----T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                        321189 5 +  24302211 TTC-TT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356021 5 -    752769 TTC-TT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672402 1 -    737560 -----T
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                             219689 1 +    317179 -----T
i Manis_pentadactyla.KN006162.1                          C 0 I 1
s Marmota_marmota.CZRN01000018.1                           7499836 5 +  40650429 att-tt
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                       149246 1 +    207569 -----G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_19308             24867 1 -     74585 -----T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 227
s Meriones_unguiculatus.MerUng_scaffold_7390                 47890 5 -    140813 CTG-TT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 1
s Mesocricetus_auratus.KB708134.1                         17428087 5 +  29670104 ctt-tc
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_6114                     80070 1 +     93471 -----G
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 1
s Mico_argentatus.k141_582562                                 9163 3 +     17804 G---TT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9665 3 -     12984 G---TT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     17979 3 -     26561 G---TT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983456 5 +  93316391 tat-at
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44237 4 +    145209 tt--tt
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_2233                183480 1 +    200668 -----A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 1
s Microtus_ochrogaster.CM001695.1                         15961223 5 +  27267610 ttt-tc
i Microtus_ochrogaster.CM001695.1                        C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    6361578 1 -   8254450 -----G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_23309             40479 1 -     48117 -----G
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 2
s Miopithecus_ogouensis.k141_1534655                         21201 5 -     27822 TTC-TT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7381 1 +     27589 -----T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 4
s Mirza_zaza.k141_766280                                     51247 5 -     62432 TAT-AT
i Mirza_zaza.k141_766280                                 I 1 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351960 1 +    437263 -----G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177640 1 +    366855 -----G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_13123                  23174 1 -     82753 -----A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_18455                   17391 1 -     63510 -----T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 1
s Murina_feae.MurFea_scaffold_17764                          37515 1 +     47283 -----G
i Murina_feae.MurFea_scaffold_17764                      C 0 I 1
s Mus_caroli.LT608237.1                                   35591756 6 + 120012414 tttttt
i Mus_caroli.LT608237.1                                  C 0 I 1
s Mus_musculus.chr8                                       41686115 5 + 129401213 ttt-tt
i Mus_musculus.chr8                                      C 0 I 1
s Mus_pahari.LT608297.1                                   58216003 4 +  89631738 tt--tt
i Mus_pahari.LT608297.1                                  C 0 I 1
s Mus_spretus.CM004101.1                                  39495435 5 + 130317789 gtt-tt
i Mus_spretus.CM004101.1                                 C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_12866             81622 5 -     86153 TTT-TA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 1
s Mustela_putorius.JH418006.1                             14354014 1 +  14710649 -----t
i Mustela_putorius.JH418006.1                            C 0 I 13
s Myotis_brandtii.KE162005.1                               9791564 1 +  10118263 -----G
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                4385924 1 +   6019432 -----g
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                               381743 1 +   4330536 -----g
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_66571                          573 1 +     18357 -----G
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118450 5 +    130748 TTT-TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 1
s Nannospalax_galili.KL204047.1                             944911 5 +   3037898 ttt-tc
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_1350636                              27867 5 +     34575 TTC-TT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467977 1 -  31847680 -----t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 3
s Neophocaena_asiaeorientalis.KZ687982.1                   1226129 1 -   7148211 -----G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_7894                   126427 1 -    149072 -----G
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 1
s Nomascus_annamensis.k141_1771965                           52600 5 -    132029 TTC-TT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8695 5 -     16345 TTC-TT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14580 5 +     22201 TTC-TT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412801 5 -  22158432 TTC-TT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24978 5 -     54323 TTC-TT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197104 1 +   9404916 -----t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                             93635122 5 + 196305487 TAT-AT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1880 5 -      3937 TAT-AT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563361 5 - 199412804 TAT-AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550062 5 -   3988456 CTT-TT
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Octodon_degus.JH651603.1                                11052915 5 -  11899542 tat-tt
i Octodon_degus.JH651603.1                               C 0 I 1
s Odobenus_rosmarus.KB229312.1                             1450574 1 +   2017862 -----t
i Odobenus_rosmarus.KB229312.1                           C 0 I 2
s Odocoileus_virginianus.KZ100018.1                         435017 1 -    630418 -----G
i Odocoileus_virginianus.KZ100018.1                      C 0 I 1
s Okapia_johnstoni.LVCL01S0005463.1                          13009 1 +    150152 -----G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_7387                    91582 5 -    140218 TTT-TC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_28377                    2441 5 -     41509 TTT-TC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 1
s Orcinus_orca.KB316932.1                                  8095399 1 +  10937097 -----G
i Orcinus_orca.KB316932.1                                C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_171931              12472 4 -     14239 TT--TT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                       107102534 5 - 174332312 ttt-tt
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                        38150 1 +    559221 -----t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_649260                        38522 5 -     51505 TAT-AT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351525 5 +   1103335 tat-at
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26402999 1 -  44047080 -----C
i Ovis_aries.CM001607.2                                  C 0 I 1
s Ovis_canadensis.OviCan_scaffold_67953                       3518 1 +     17875 -----C
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 1
s Pan_troglodytes.KZ622849.1                                 32379 5 -    110857 ttc-tt
i Pan_troglodytes.KZ622849.1                             I 458 I 193
s Panthera_onca.PanOnc_flattened_line_3271                   23321 1 -    230217 -----T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                              18460647 1 -  18783137 -----T
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               3971367 1 +   8748460 -----T
i Panthera_tigris.KE722367.1                             C 0 I 1
s Pantholops_hodgsonii.KE114653.1                          1614441 1 +   2937107 -----C
i Pantholops_hodgsonii.KE114653.1                        C 0 I 1
s Papio_anubis.CM001495.2                                   242029 5 - 183742232 ttc-tt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8493 5 +     21308 TTC-TT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291065 5 -  20919399 TTC-TT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21148 5 -     27687 TTC-TT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14284 5 +     16796 TTC-TT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21094 5 -     23640 TTC-TT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13960 1 +     78924 -----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_1921260                          24806 5 +     31479 TAT-AT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17170 5 -     24908 TAT-AT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         531 5 +      9367 TGA-TT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 1
s Peromyscus_maniculatus.KI615324.1                         245662 5 +  18517816 TTT-TC
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1
s Petromus_typicus.PetTyp_scaffold_17301                     30748 5 -     56120 ATT-TC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 1
s Phocoena_phocoena.PhoPho_flattened_line_46867              11257 1 -     15039 -----G
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 I 1
s Piliocolobus_badius.k141_2704958                            1315 5 +     55023 TTC-TT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          866 5 -     89929 TTC-TT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1454 5 +     40849 TTC-TT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253121 5 +  14605196 ttc-tt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             1695 1 +     22231 -----g
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 421
s Pithecia_albicans.k141_1239476                             63760 2 +    207309 ----TT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4854 2 -     25401 ----TT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30595 2 +     58159 ----TT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30871 2 +     63561 ----TT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30634 2 +     51148 ----TT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555601 2 -   4542175 ----TT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30618 2 +     51125 ----TT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3341 1 -      8168 -----G
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 I 1
s Plecturocebus_bernhardi.k141_2549090                        7022 2 +     39866 ----TT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2107 2 -      9282 ----TT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41511 2 -     87950 ----TT
i Plecturocebus_caligatus.k141_1382851                   C 0 I 3
s Plecturocebus_cinerascens.k141_1164729                     41904 2 -     88961 ----TT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6603 2 -     39403 ----TT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41555 2 +     87928 ----TT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6600 2 -     60166 ----TT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13536 2 -     67232 ----TT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41452 2 -     90634 ----TT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42920 2 +     89403 ----TT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176820 5 - 189387572 ttc-tt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191637 5 -   9816681 TTC-TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26451 5 +     69807 TTC-TT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43643 5 -     80239 TTC-TT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981474 5 +   4620579 tat-at
i Prolemur_simus.MPIZ01000396.1                          I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564940 5 -   2598838 tat-at
i Propithecus_coquerelli.NW_012148875.1                  I 1 C 0
s Propithecus_coronatus.k141_209299                           2576 5 -      7103 TAT-AT
i Propithecus_coronatus.k141_209299                      I 1 C 0
s Propithecus_diadema.k141_153680                             3173 5 -     11706 TAT-AT
i Propithecus_diadema.k141_153680                        I 1 C 0
s Propithecus_edwardsi.k141_635656                            6909 5 -     30655 TAT-AT
i Propithecus_edwardsi.k141_635656                       I 1 C 0
s Propithecus_perrieri.k141_1496898                          33234 5 +     46564 TAT-AT
i Propithecus_perrieri.k141_1496898                      I 1 C 0
s Propithecus_tattersalli.k141_1127767                       93505 5 -     98465 TAT-AT
i Propithecus_tattersalli.k141_1127767                   I 1 C 0
s Propithecus_verreauxi.k141_1047036                          7142 5 +     35169 TAT-AT
i Propithecus_verreauxi.k141_1047036                     I 1 C 0
s Psammomys_obesus.NESX01036366.1                            35463 5 +     52041 ctg-TT
i Psammomys_obesus.NESX01036366.1                        C 0 I 1
s Pteronotus_parnellii.KE847780.1                            50522 1 -     66298 -----g
i Pteronotus_parnellii.KE847780.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3581 1 -     18639 -----T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 13
s Pteropus_alecto.KB030862.1                               5839775 1 -  28871421 -----a
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN525825.1                             3536284 1 -   4952924 -----a
i Pteropus_vampyrus.KN525825.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            18097961 1 +  38429054 -----T
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_nigripes_b.ctg100                                  152314 5 -   7812017 TTC-TT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6691 5 +     72585 TTC-TT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51938 1 +     55069 -----G
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 1
s Rattus_norvegicus.chr16                                 37021360 5 -  90668790 ttt-tt
i Rattus_norvegicus.chr16                                C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                       2913664 1 +   3329780 -----g
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 1
s Rhinopithecus_bieti.k119_778604                              395 5 +      7119 TTC-TT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121005 5 + 195417433 ttc-tt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235246 5 -   7961872 TTC-TT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73697 1 -    116970 -----A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 1
s Saguinus_bicolor.k141_1429097                               2900 3 +     27962 T---TT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2795 3 +      6077 T---TT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2886 3 +      5971 T---TT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2826 3 +      5932 T---TT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1151 3 -      4390 T---TT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390584 3 - 209938924 T---TT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2775 3 +      5979 T---TT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3518 3 -      4301 T---TT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6591 1 +     16473 -----C
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 1
s Saimiri_boliviensis.NW_024100920.1                       1107922 3 + 121099817 t---tt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29484 3 -     47369 T---TT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29873 3 -     79414 T---TT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26565 3 -     34454 T---TT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13971 3 -     22428 T---TT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29116 3 -     47109 T---TT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237183 3 +   5703754 T---TT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6773 3 +     21866 T---TT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114881 1 +    313613 -----T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 6
s Semnopithecus_entellus.k141_158471                         24138 5 +     27374 TTA-TT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27656 5 +     58920 TTC-TT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14152 5 -     45317 TTC-TT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21811 5 -     42441 TTC-TT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24491 5 -     29113 TTC-TT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27560 5 -     48123 TTC-TT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48070 5 +     77746 TTT-TC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126            1857195 1 -   1910179 -----G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1867194 5 +   3870691 att-tt
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525              5348 1 -     97271 -----t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 207
s Suricata_suricatta.SurSur_flattened_line_6629             123798 1 +    196729 -----T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                    6640010 1 +  69701581 -----g
i Sus_scrofa.CM000828.4                                  C 0 I 1
s Symphalangus_syndactylus.tarseq_199                       390062 5 +   1523678 TTC-TT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12502 1 +     22964 -----G
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_224794                1566 5 +      5583 TTT-TT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_7432                      190478 1 +    199430 -----G
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    104430 1 -    539355 -----G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_1780720                                5771 3 +      6850 --T-TG
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5822 3 +     20590 --T-TG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352017 5 - 186847797 ttc-tt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23075 5 -     33621 GTT-TT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 1
s Tolypeutes_matacus.TolMat_scaffold_31955                   18690 5 -     31044 TTT-TT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_294                    478548 1 -    610378 -----A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_1189070                        19697 5 +     26378 TTC-TT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32366 5 -     78344 TTC-TT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19018 5 +     25722 TTC-TT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27317 5 -     62838 TTC-TT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27363 5 +     46913 TTC-TT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8171 5 -     28527 TTC-TT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29256 5 -     64340 TTC-TT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27293 5 -     63452 TTC-TT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8736 5 +     22490 TTC-TT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2164 5 -      6147 TTC-TT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9068 5 -     13050 TTC-TT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254308 5 -   6242583 TTC-TT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         332 5 +     19340 TTC-TT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172207 1 -    200418 -----G
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 1
s Trichechus_manatus.JH594705.1                            6479316 4 -  10818551 tt--tt
i Trichechus_manatus.JH594705.1                          C 0 I 1
s Tupaia_chinensis.KB320699.1                              1832719 4 -   4065304 -tt-tt
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_394                       7035 4 -     70247 -TT-TT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 1
s Tursiops_truncatus.MRVK01000835.1                       17360138 1 -  33153633 -----G
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_46687                    1338 1 -     21056 -----T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 1
s Ursus_maritimus.KK499267.1                                180733 1 +   5085361 -----t
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Varecia_rubra.k141_787544                                  24118 5 -     30710 TAT-AT
i Varecia_rubra.k141_787544                              I 1 C 0
s Varecia_variegata.k141_289850                              23025 5 -    147434 TAT-AT
i Varecia_variegata.k141_289850                          I 1 C 0
s Vicugna_pacos.KN270157.1                                   75214 1 +   5488506 -----g
i Vicugna_pacos.KN270157.1                               C 0 I 5
s Vulpes_lagopus.VulLag_flattened_line_12041                103872 1 -    112863 -----T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 1
s Xerus_inauris.XerIna_scaffold_2302                        172972 5 -    224448 ATT-TT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732         27772 1 -     86975 -----T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_230229                      2253 5 +      2695 TTA-TA
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 1
e Pygathrix_cinerea.k141_1153803                             25825 0 +     91421 C
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751 0 -    498745 C
e Equus_caballus.CM000403.2                               21373965 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041 0 -   4378816 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4348 14 +     36723 T--T-T--T--T-T--------AAAG-A-A-A-G
s Acinonyx_jubatus.LLWD01001279.1                           811702 13 +   1699592 T--C-C--T--T-A--------AA-G-A-A-T-G
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18780 14 +     63021 C--T-T--T--A-A--------AT-A-A-A-CAG
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414229 13 +  29979442 t--t-c--t--t-a--------aa-g-a-a-c-a
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                            214542 10 +    347723 --------t--a-a--------aa-g-a-a-c-a
i Ailurus_fulgens.LNAC01001112.1                         I 217 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16826  7 -     61208 T--TTT--T--A-A--------------------
i Allactaga_bullata.AllBul_scaffold_20030                I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46673 14 +     53615 T--T-T--T--T-T--------AAAA-G-A-A-T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42618 14 +     44087 T--T-T--T--T-A--------AAAG-A-A-A-G
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15255 14 -     21945 T--T-T--T--T-A--------AAAG-A-A-A-G
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16928 14 +     32033 T--T-T--T--T-A--------AAAG-A-A-A-G
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71122 14 -     84148 T--T-T--T--T-T--------TTAA-A-G-A-A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43361 14 -     78289 T--T-T--T--T-T--------TAAA-G-A-A-A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42800 14 +     55831 T--T-T--T--T-T--------TTAA-A-G-A-A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41257  8 -     64179 ----------------------TAAA-G-A-A-A
i Alouatta_juara.k141_1687208                            I 4 C 0
s Alouatta_macconnelli.k141_361275                           22890 14 -     24835 T--T-T--T--T-T--------TAAA-G-A-A-A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39876 14 +     45454 T--T-T--T--T-T--------TAAA-G-A-A-A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45521 14 +     70886 T--T-T--T--T-T--------TTAA-A-G-A-A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7704  8 +     30854 ----------------------TAAA-G-A-A-A
i Alouatta_puruensis.k141_251022                         I 4 C 0
s Alouatta_seniculus.k141_928287                             31840  8 +     42133 ----------------------TAAA-G-A-A-A
i Alouatta_seniculus.k141_928287                         I 4 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584062 14 +   2318259 G--A-T--T-Ct-t--------aa-g-a-a-a-g
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175511 15 -    412891 T--T-TTCT--T-A--------AA-T-A-A-T-G
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49161 14 -     68529 T--T-T--T-CT-T--------AA-G-A-A-A-G
i Antilocapra_americana.AntAmePen_scaffold_21030         I 1 C 0
s Aotus_azarae.k141_118258                                   49574  8 -     65372 T--T-T--T--TTT--------A-----------
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43328  7 +     43593 T--T-T--T--T-T--------A-----------
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671341  7 +   5030052 t--t-t--t--t-t--------a-----------
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22983  7 -     23494 T--T-T--T--T-T--------A-----------
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                8119  7 +      8415 T--T-T--T--T-T--------A-----------
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14860 13 -     32367 T--T-T--T--T-A--------AA-G-A-A-T-G
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3803 10 -     15198 T--T-TTCT--T-A--------AA----------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 1 I 1
s Ateles_geoffroyi_b.tarseq_1536                               273584 14 +  21539123 T--T-T--T--T-T--------AAAA-A-A-A-G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9750 15 +     48076 T--TTT--T--T-T--------AAAG-A-A-A-G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4887 14 -     28759 T--T-T--T--T-T--------AAAG-A-A-A-G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32441 14 +     44353 T--T-T--T--T-T--------AAAA-A-A-A-G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47811 15 -     71267 T--T-T--T--TTT--------AAAG-A-A-A-G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21871 14 -     33135 T--T-T--T--T-T--------AAAG-A-A-A-G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5061 15 +     11645 G--T-T--T--T-T--------AAAAGA-C-A-G
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5067 15 -     19611 G--T-T--T--T-T--------AAAAGA-C-A-G
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955890 14 -  23207421 T--T-T--T-CG-T--------AA-G-A-A-A-G
i Balaenoptera_acutorostrata.KI537508.1                  I 1 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3099 14 -      4711 T--T-T--T-CG-T--------AA-G-A-A-A-G
i Balaenoptera_bonaerensis.DF507193.1                    I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85057 14 +    124022 T--A-T--T-CT-T--------AA-G-A-A-A-G
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 1 C 0
s Bison_bison.KN261452.1                                     20590 14 +    288883 T--A-T--T-CT-T--------AA-G-A-A-A-G
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003047.1                                  20354977 14 +  48749331 T--A-T--T-CT-T--------AA-G-A-A-A-N
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                      753545 14 +   1948126 T--A-T--T-CT-T--------AA-G-A-A-A-C
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000203.6                                   27543684 14 -  45695690 T--A-T--T-CT-T--------AA-G-A-A-A-C
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               1528708 14 -   4408762 T--A-T--T-CT-T--------AA-G-A-A-A-G
i Bubalus_bubalis.KI419123.1                             I 1 C 0
s Cacajao_ayresi.k141_96119                                   6776 10 +     28062 -----------T-T--------AAAG-A-A-A-G
i Cacajao_ayresi.k141_96119                              I 3 C 0
s Cacajao_calvus.k141_89051                                  42070 10 -     91139 -----------T-T--------AAAG-A-A-A-G
i Cacajao_calvus.k141_89051                              I 3 C 0
s Cacajao_hosomi.k141_81245                                  19596 10 +     95584 -----------T-T--------AAAG-A-A-A-G
i Cacajao_hosomi.k141_81245                              I 3 C 0
s Cacajao_melanocephalus.k141_619699                         19509 10 +    119600 -----------T-T--------AAAG-A-A-A-G
i Cacajao_melanocephalus.k141_619699                     I 3 C 0
s Callibella_humilis.k141_1233062                             9056 12 +     18648 T--T-T--T--T-T--------AAAG-A-A----
i Callibella_humilis.k141_1233062                        C 0 I 4
s Callimico_goeldii.k141_1609886                              8594 12 -     13885 T--T-T--T--T-A--------AAAT-A-A----
i Callimico_goeldii.k141_1609886                         C 0 I 4
s Callithrix_geoffroyi.k119_459277                             663 12 -      8861 T--T-T--T--T-T--------AAAG-A-A----
i Callithrix_geoffroyi.k119_459277                       C 0 I 4
s Callithrix_jacchus.pat_scaffold_3                      165453056 12 + 189096842 T--T-T--T--T-T--------AAAG-A-A----
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 4
s Callithrix_kuhlii.k119_102356                                579 12 +      8664 T--T-T--T--T-T--------AAAG-A-A----
i Callithrix_kuhlii.k119_102356                          C 0 I 4
s Camelus_bactrianus.KN276810.1                            7629886  7 +  17673402 ----------------------ct-t-a-a-a-g
i Camelus_bactrianus.KN276810.1                          I 5 C 0
s Camelus_dromedarius.KN272107.1                           4664172  7 +   7040546 ----------------------ct-t-a-a-a-g
i Camelus_dromedarius.KN272107.1                         I 5 C 0
s Camelus_ferus.KB017975.1                                 1207832  7 +   1652518 ----------------------ct-t-a-a-a-g
i Camelus_ferus.KB017975.1                               I 5 C 0
s CanFam4.chr16                                           42504244 13 +  60362399 T--T-C--T--T-A--------AA-G-A-A-C-A
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7880 13 -     23171 T--T-C--T--T-A--------AA-G-A-A-C-A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221223 13 +   9314153 t--t-c--t--t-a--------aa-g-a-a-c-a
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            41614358 13 +  59632846 t--t-c--t--t-a--------aa-g-a-a-c-a
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            45105939 13 -  63665305 t--t-c--t--t-a--------aa-g-a-a-c-a
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capra_aegagrus.CM003241.1                               27407774 14 -  46296322 G--A-T--T-Ct-t--------aa-g-a-a-a-g
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 26590047 14 +  44709034 G--A-T--T-CT-T--------AA-G-A-A-A-G
i Capra_hircus.CM004588.1                                I 1 C 0
s Capromys_pilorides.CapPil_scaffold_108409                   6719 12 +      8835 T--T-T--T--T-A--------CA---A-T-T-G
i Capromys_pilorides.CapPil_scaffold_108409              I 1 I 160
s Carlito_syrichta.NW_007259797.1                           269148 14 +    496798 t--t-t--t--t-t--------aaag-a-a-a-g
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               4092 15 +      5315 T--T-TTCT--T-A--------AA-G-A-A-G-G
i Carollia_perspicillata.CarPer_scaffold_170178          I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75551 14 -    217609 T--G-C--t--t-t--------tt-t-g-aaa-t
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cavia_aperea.AVPZ01000300.1                              4994810 12 +  23392119 G--T-T--T--T-G--------AA---A-T-T-G
i Cavia_aperea.AVPZ01000300.1                            I 1 I 141
s Cavia_porcellus.DS562891.1                               4998252 12 +  23407841 t--t-t--t--t-g--------aa---a-t-t-g
i Cavia_porcellus.DS562891.1                             I 1 I 141
s Cavia_tschudii.CavTsc_scaffold_23560                       61353 12 -     66877 T--T-T--T--T-G--------AA---A-T-T-G
i Cavia_tschudii.CavTsc_scaffold_23560                   I 1 I 141
s Cebuella_niveiventris.k141_592277                           3976 12 -     12580 T--T-T--T--T-T--------AAAG-A-A----
i Cebuella_niveiventris.k141_592277                      C 0 I 4
s Cebuella_pygmaea.k141_145798                               42031 12 +     53515 T--T-T--T--T-T--------AAAG-A-A----
i Cebuella_pygmaea.k141_145798                           C 0 I 4
s Cebus_albifrons.Contig27                                  369969 12 -  26074798 T--T-T--T--T-T--------AATA-T-A----
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6858 12 -     34880 T--T-T--T--T-T--------AATA-T-A----
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65953 12 -     89041 T--T-T--T--T-T--------AATA-T-A----
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1079 14 -      5494 T--T-T--T--T-A--------AAAG-A-A-A-G
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491028 15 -  27778364 t--t-t--tctt-a--------aa-g-a-a-a-g
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17861 15 +     27315 T--T-T--TCTT-A--------AA-G-A-A-A-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 1 C 0
s Cercocebus_atys.KQ010504.1                                139849 14 -   4669795 t--t-t--t--t-t--------aaaa-g-a-a-a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43590 14 +     47900 T--T-T--T--T-T--------AAAA-G-A-A-A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43422 14 -     44860 T--T-T--T--T-T--------AAAA-G-A-A-A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43405 14 -    148725 T--T-T--T--T-T--------AAAA-G-A-A-A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25628 14 -     40656 T--T-T--T--T-T--------AAAA-G-A-A-A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5597 14 +     20796 T--T-T--T--T-T--------AAAA-G-A-A-A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10667 14 -     17524 T--T-T--T--T-T--------AAAA-G-A-A-A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26388 14 -     34525 T--T-T--T--T-T--------AAAA-G-A-A-A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10218 14 -     25376 T--T-T--T--T-T--------AAAA-G-A-A-A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362813 14 -  39242232 T--T-T--T--T-T--------AAAA-G-A-A-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268525 14 +  21565898 T--T-T--T--T-T--------TAAA-G-A-A-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30863 14 -     45857 T--T-T--T--T-T--------AAAA-G-A-A-A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25801 14 -     32606 T--T-T--T--T-T--------AAAA-G-A-A-A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1958 14 +      8499 T--T-T--T--T-T--------TAAA-G-A-A-A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24359 10 +     70610 T--T-T--T--T-T--------AAAG--------
i Cercopithecus_pogonias.k141_6079                       C 0 I 3
s Cercopithecus_roloway.k141_3012935                         21282 14 +     36323 T--T-T--T--T-T--------AAAA-G-A-A-A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11662 13 -     19938 T--T-T--T--T-A--------AA-G-A-G-A-G
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 1 C 0
s Cheirogaleus_major.k141_666340                             29479 16 -     33796 T--TTT--T--T-T--------TAAAGA-A-A-G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             3996 16 -     15404 T--TTT--T--T-T--------TAAAGA-A-A-A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7856 14 -     32913 T--T-T--T--T-T--------AAAG-A-A-A-G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18269 14 -     40346 T--T-T--T--T-T--------AAAG-A-A-A-G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18524 14 +    216457 T--T-T--T--T-T--------AAAG-A-A-A-G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18317 14 +     39636 T--T-T--T--T-T--------AAAG-A-A-A-G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237274 12 -   2543920 t--t-t--t--t-a--------aa---a-t-t-g
i Chinchilla_lanigera.JH722012.1                         I 1 I 157
s Chiropotes_albinasus.k141_1946120                           2906 14 +      5346 T--T-T--T--T-T--------AAAG-A-A-A-G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41405  9 -    112038 -------------T--------AAAG-A-A-A-G
i Chiropotes_israelita.k141_313004                       I 4 C 0
s Chiropotes_sagulatus.k141_1113111                           6977  9 +     34062 -------------T--------AAAG-A-A-A-G
i Chiropotes_sagulatus.k141_1113111                      I 4 C 0
s Chlorocebus_aethiops.ctg25                                342177 14 +  18827391 T--T-T--T--T-A--------AAAG-A-A-A-G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8723 14 -     44032 T--T-T--T--T-A--------AAAG-A-A-A-G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303502 14 - 135778131 t--t-t--t--t-a--------aaag-a-a-a-g
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 12978 13 +     15858 T--T-T--T--T-A--------GA-G-A-A-A-G
i Choloepus_didactylus.ChoDid_scaffold_70559             I 2256 C 0
s Choloepus_hoffmanni.KN194906.1                            604554 13 -    839153 t--t-t--t--t-a--------aa-g-a-a-a-g
i Choloepus_hoffmanni.KN194906.1                         I 2256 C 0
s Colobus_angolensis.KN981557.1                             407948 14 -   2368649 t--t-t--t--t-t--------taaa-g-a-a-a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377822 14 - 200372422 T--T-T--T--T-T--------TAAA-G-A-A-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1372 14 -     84244 T--T-T--T--T-T--------TAAA-G-A-A-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806098  6 +  53390261 -----------------------T-T-A-A-A-G
i Condylura_cristata.JH655891.1                          I 6 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1668 14 -      8242 T--T-TTCT--T-A--------AA-T-A-A-A--
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 1 I 4
s Cricetomys_gambianus.CriGam_scaffold_14425                 41094 13 -     83289 T--T-T--T--A-T--------AA-G-A-A-A-G
i Cricetomys_gambianus.CriGam_scaffold_14425             I 1 C 0
s Cricetulus_griseus.LT883664.1                          213113543 12 - 224834208 t--t-t--t--t-t--------aa---a-a-a-g
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3163 13 +     87169 T--C-C--T--T-A--------AA-G-A-A-T-G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643608 13 -   1526836 T--T-T--T--C-A--------AA-G-A-T-T-G
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 1 I 178
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16262 12 +     50838 T--T-T--T--T-A--------CA---A-T-T-G
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 1 I 157
s Cuniculus_paca.CunPac_flattened_line_7025                   2728 11 +     36344 ---T-T--T--T-G--------AA---A-T-T-G
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 170
s Dasyprocta_punctata.DasPun_flattened_line_15900            26500 12 +     75252 T--T-T--T--T-G--------AA---A-T-T-G
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 1 I 154
s Dasypus_novemcinctus.JH564415.1                          2109005 13 -   2246927 t--t-t--t--t-a--------aa-g-a-a-a-g
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                        291433 14 +  12879189 T--T-T--T--T-T--------AAAA-A-A-T-G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624219 14 -  35494412 T--T-T--T-CG-T--------AA-G-A-A-A-G
i Delphinapterus_leucas.KZ290073.1                       I 1 C 0
s Desmodus_rotundus.KZ672289.1                            11863541 15 -  20541912 T--T-TTCT--C-A--------AA-G-A-A-T-G
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663319 15 -   1390856 t--t-t--tctt-a--------aa-g-a-a-a-g
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138105 15 -    198055 T--T-T--TCTT-A--------AA-G-A-A-A-G
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97306 12 -    115145 T--T-T--T--T-A--------AA---A-T-T-G
i Dinomys_branickii.DinBra_scaffold_10381                I 1 I 160
s Dipodomys_ordii.KN672350.1                              18949169  9 -  37912305 c--t-t--c--a-a--------aa-a--------
i Dipodomys_ordii.KN672350.1                             I 1 I 5
s Dipodomys_stephensi.DipSte_scaffold_89095                   4116  9 -     10735 C--T-T--C--A-A--------AA-A--------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 1 I 5
s Dolichotis_patagonum.DolPat_scaffold_80628                  8775 12 +     14636 T--T-T--T--T-G--------AA---A-T-C-G
i Dolichotis_patagonum.DolPat_scaffold_80628             I 1 I 145
s Echinops_telfairi.JH980293.1                            62853148 13 - 111700974 t--t-t--t--g-a--------aa-g-a-a-a-g
i Echinops_telfairi.JH980293.1                           I 2 C 0
s Eidolon_helvum.AWHC01266696.1                               5127 11 +     19438 t--t-ttct--t-a--------aa-t--------
i Eidolon_helvum.AWHC01266696.1                          I 1 I 1
s Elaphurus_davidianus.JRFZ01104969.1                       238448 14 -    607251 T--T-T--T-CT-T--------AG-G-A-A-A-G
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 C 0
s Elephantulus_edwardii.JH947257.1                         9107387  3 -  10337057 -----------------------------a-a-c
i Elephantulus_edwardii.JH947257.1                       I 6 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29817 13 +    110024 c--t-t--t--t-a--------aa-g-a-a-a-g
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01026522.1                           11792 13 +     18970 c--t-t--t--t-a--------aa-g-g-a-a-g
i Ellobius_talpinus.LOJH01026522.1                       I 1 C 0
s Eptesicus_fuscus.JH977646.1                             12577170 14 +  14770903 ---T-TTCT--T-A--------AA-G-A-A-A-G
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Erythrocebus_patas.Contig38                               261703 14 +  21539334 T--T-T--T--T-A--------AAAG-A-A-A-G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63769 14 -    133382 T--T-T--T-CA-T--------AA-G-A-A-A-G
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             3986 14 +      7672 T--T-T--T-CG-T--------AA-G-A-A-A-G
i Eubalaena_japonica.EubJap_flattened_line_118172        I 1 C 0
s Eulemur_albifrons.k141_51491                               13605 14 -     24895 T--T-T--T--T-T--------AAAG-A-A-A-G
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41314 14 -     70999 T--T-T--T--T-T--------AAAG-A-A-A-G
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85276 14 +    112731 T--T-T--T--T-T--------AAAG-A-A-A-G
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41849 14 +     68309 T--T-T--T--T-T--------AAAG-A-A-A-G
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52171 14 -     65740 T--T-T--T--T-T--------AAAG-A-A-A-G
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22804 14 -     75513 T--T-T--T--T-T--------AAAG-A-A-A-G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 46997 14 -     97555 T--T-T--T--T-T--------AAAG-A-A-A-G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3722 14 +     30972 T--T-T--T--T-T--------AAAG-A-A-A-G
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41444 14 -     52037 T--T-T--T--T-T--------AAAG-A-A-A-G
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57848 14 -    111500 T--T-T--T--T-T--------AAAG-A-A-A-G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245615 13 - 206538554 T--C-C--T--T-A--------AA-G-A-A-T-G
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                          185115400 13 - 205367284 T--C-C--T--T-A--------AA-G-A-A-T-G
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26502 13 -     30238 T--C-C--T--T-A--------AA-G-A-A-T-G
i Felis_nigripes.FelNig_flattened_line_31944             I 1 C 0
s Galago_moholi.ctg3793                                     123374 14 -    137831 T--T-T--T--T-A--------AAAG-A-A-A-G
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6919 14 +     22493 T--T-T--T--T-A--------AAAA-A-A-A-G
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18970 14 -     32986 T--T-T--T--T-T--------AAAG-A-A-A-G
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_132127               5782 13 +      5976 T--T-T--T--T-T--------AA-G-A-A-A-G
i Galeopterus_variegatus.GalVar_scaffold_132127          I 303 n 12
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90127 14 -     95226 T--T-T--T-CT-T--------AA-G-A-A-A-G
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 1 C 0
s Glis_glis.GliGli_scaffold_33859                            33048 13 -     36801 T--T-T--T--T-A--------AA-A-A-A-A-G
i Glis_glis.GliGli_scaffold_33859                        I 1 C 0
s Gorilla_beringei.k141_3358147                               4665 15 -      8343 TT-T-T--T--T-T--------AAAG-A-A-A-G
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253676 15 - 186649187 t-tt-t--t--t-t--------aaag-a-a-a-g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     545 13 -     78134 T--T-T--T--T-A--------AC-G-A-A-A-G
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 C 0
s Hapalemur_alaotrensis.k141_330369                          13531 14 -     40692 C--T-T--T--T-T--------AAAG-A-A-A-G
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34933 14 +     49394 T--T-T--T--T-T--------AAAG-A-A-A-G
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59802 14 -     66874 T--T-T--T--T-T--------AAAG-A-A-A-G
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8675 14 -     42923 C--T-T--T--T-T--------AAAG-A-A-A-G
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15675 14 -     53142 C--T-T--T--T-T--------AAAG-A-A-A-G
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29640 13 -    327341 T--C-C--T--T-A--------AA-G-A-A-T-G
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7881 14 +     48891 T--A-T--T-CT-T--------AA-G-A-A-A-G
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 1 C 0
s Heterocephalus_glaber.JH602082.1                         1925903 12 -  22651954 t--t-t--t--t-a--------aa---a-t-t-g
i Heterocephalus_glaber.JH602082.1                       I 1 I 166
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6482 14 -     36432 T--T-T--T-CC-T--------AA-G-A-A-A-G
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49649 14 +     49977 T--T-TTCT--T-A--------AA-T-A-A-A--
i Hipposideros_galeritus.HipGal_scaffold_23202           I 1 C 0
s Hoolock_leuconedys.ctg274                                    141683 14 -    630532 T--T-T--T--T-T--------AAAG-A-A-A-G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68559 13 +     83186 T--C-T--T--G-A--------AA-G-A-A-T-C
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70203 12 +    143317 T--T-T--C--T-G--------AA---A-T-T-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 1 I 135
s Hylobates_agilis.k141_1155965                               4713 14 +     12352 T--T-T--T--T-T--------AAAG-A-A-A-G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11897 14 +     55766 T--T-T--T--T-T--------AAAG-A-A-A-G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051495 14 + 191637585 T--T-T--T--T-T--------AAAG-A-A-A-G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800373 14 +  11177569 T--T-T--T--T-T--------AAAG-A-A-A-G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385621 13 +   7955117 t--t-t--t--g-a--------aa-g-a-a-a-g
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_2415743                                    1184 15 +     11955 G--T-T--T--T-T--------AAAAGA-A-A-G
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2006 14 -     16823 T--T-T--T-CG-T--------AA-G-A-A-A-G
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 1 C 0
s Jaculus_jaculus.JH725527.1                               1238011  6 +   9596543 t--t-t--t--a-g--------------------
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64490 14 -     97402 T--T-T--T-CG-T--------AG-G-A-A-A-G
i Kogia_breviceps.KogBre_flattened_line_3970             I 1 C 0
s Lagothrix_lagothricha.k141_246028                          42126 16 +    110728 T--T-TTTT--T-T--------AAAG-A-A-A-G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61034 16 -     65777 T--T-TTCT--T-A--------AA-G-AAA-A-G
i Lasiurus_borealis.LasBor_scaffold_16567                I 1 C 0
s Lemur_catta.scaffold_24                                 14758324 14 +  30322482 T--T-T--T--T-T--------AAAG-A-A-A-G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3041 12 -     13097 T--T-T--T--T-T--------TAAA-G-A----
i Leontocebus_fuscicollis.k141_2994775                   C 0 I 5
s Leontocebus_illigeri.k141_2951200                           2797 10 +      5940 -----T--T--T-T--------TAAA-G-A----
i Leontocebus_illigeri.k141_2951200                      I 1 I 5
s Leontocebus_nigricollis.k141_3905062                        2627 10 -      5717 -----A--T--T-T--------TAAA-G-A----
i Leontocebus_nigricollis.k141_3905062                   I 1 I 5
s Leontopithecus_chrysomelas.k141_1327670                     8993 12 -     11567 T--T-A--T--T-T--------AAAG-A-A----
i Leontopithecus_chrysomelas.k141_1327670                C 0 I 4
s Leontopithecus_rosalia.k141_349454                         10374 12 -     12945 T--T-A--T--T-T--------AAAG-A-A----
i Leontopithecus_rosalia.k141_349454                     C 0 I 4
s Lepilemur_ankaranensis.k141_567626                          7853 14 +     29618 ---T-T--T--T-T--------TAAAGA-A-A-G
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7849 14 +     31569 ---T-T--T--T-T--------TAAAGA-A-A-G
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7858 15 +     24756 A--T-T--T--T-T--------TAAAGA-A-A-G
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7859 14 +     16388 ---T-T--T--T-T--------TAAAGA-A-A-G
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812378 13 -   3914936 t--t-c--t--t-a--------aa-a-a-a-c-a
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16703 14 +     24238 C--T-TT-T--T-A--------AA-G-G-A-A-G
i Lepus_americanus.LepAme_scaffold_56121                 I 1 C 0
s Lipotes_vexillifer.KE559953.1                             333526 14 +    662738 T--T-T--T-CG-T--------AA-G-A-A-A-G
i Lipotes_vexillifer.KE559953.1                          I 1 C 0
s Lophocebus_aterrimus.ctg367                               331807 14 -   1826925 T--T-T--T--T-T--------AAAA-G-A-A-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9131 14 +     19643 T--T-T--T--T-T--------AAAG-A-A-A-G
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042792 14 -   6120653 T--T-T--T--T-T--------AAAG-A-A-A-G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079861 13 +  43346337 t--t-t--t--t-a--------ag-g-a-a-a-g
i Loxodonta_africana.GL010049.1                          I 1 C 0
s Lycaon_pictus.CM007581.1                                41613513 13 +  59628241 t--t-c--t--t-a--------aa-g-a-a-c-a
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_1757516                              44124 14 -     61512 T--T-T--T--T-T--------AAAA-G-A-A-A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371784 14 -  60120075 T--T-T--T--T-T--------AAAA-G-A-A-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24037 14 +     30207 C--T-T--T--T-T--------AAAA-G-A-A-A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21140 14 -     24934 C--T-T--T--T-T--------AAAA-G-A-A-A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 23990 14 +     30527 T--T-T--T--T-T--------TAAA-G-A-A-A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35176 14 -     50087 T--T-T--T--T-T--------AAAA-G-A-A-A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44951  6 +     51645 T--T-T--T--T-T--------------------
i Macaca_maura.k141_1103459                              C 0 I 3
s Macaca_mulatta.NC_041758.1                                414120 14 - 187317192 c--t-t--t--t-t--------aaaa-g-a-a-a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398343 14 +  25927173 t--t-t--t--t-t--------aaaa-g-a-a-a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47507 14 -     62418 T--T-T--T--T-T--------AAAA-G-A-A-A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                   49 14 +     14901 T--T-T--T--T-T--------AAAA-A-A-A-A
i Macaca_radiata.k141_2139468                            n 22 C 0
s Macaca_siberu.k141_2185972                                 43982 14 +     59329 T--T-T--T--T-T--------AAAA-G-A-A-A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269906 14 +    668171 T--T-T--T--T-T--------AAAA-G-A-A-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  165 14 +      1732 T--T-T--T--T-T--------AAAA-G-A-A-A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1694 14 +     17132 T--T-T--T--T-T--------AAAA-G-A-A-A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222090 13 -    270270 TTTT-TTCT--T-A--------AA-T--------
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 1 I 1
s Mandrillus_leucophaeus.scaffold280                        321194 14 +  24302211 T--T-T--T--T-T--------AAAA-G-A-A-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356026 14 -    752769 T--T-T--T--T-T--------AAAA-G-A-A-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672404 13 -    737560 T--C-C--T--t-a--------aa-g-a-a-a-g
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                             219691 13 +    317179 T--C-C--T--T-A--------AA-g-a-a-a-g
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Marmota_marmota.CZRN01000018.1                           7499842 13 +  40650429 t--t-t--t--a-a--------aa-g-a-a-a-g
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149248 14 +    207569 T--T-TTTT--T-A--------AA-T-A-A-A--
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 I 2
s Meriones_unguiculatus.MerUng_scaffold_7390                 47896 11 -    140813 C--T-T--T--A-A-----------C-A-A-T-A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 C 0
s Mesocricetus_auratus.KB708134.1                         17428093 13 +  29670104 t--t-t--t--t-a--------aa-g-a-a-a-g
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80072 14 +     93471 T--T-T--T-CG-T--------AA-G-A-A-A-G
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 1 C 0
s Mico_argentatus.k141_582562                                 9166 12 +     17804 T--T-T--T--T-T--------AAAG-A-A----
i Mico_argentatus.k141_582562                            C 0 I 4
s Mico_humeralifer.k141_1180625                               9668 12 -     12984 T--T-T--T--T-T--------AAAG-A-A----
i Mico_humeralifer.k141_1180625                          C 0 I 4
s Mico_schneideri.k141_1877700                                     17982 12 -     26561 T--T-T--T--T-T--------AAAG-A-A----
i Mico_schneideri.k141_1877700                                 C 0 I 4
s Microcebus_murinus.CM007674.1                           74983461 16 +  93316391 t-tt-t--t--t-t--------aaaaga-a-a-g
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44243 13 +    145209 t--t-t--t--a-a--------aa-g-a-a-a-g
i Microgale_talazaci.MicTal_scaffold_6613                I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183482 15 +    200668 T--T-TTCT--T-A--------AA-G-A-A-T-G
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 1 C 0
s Microtus_ochrogaster.CM001695.1                         15961229 13 +  27267610 c--t-t--t--t-a--------aa-g-a-a-a-g
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361581 13 -   8254450 -----TTCT--T-A--------GA-G-A-A-A-G
i Miniopterus_natalensis.LDJU01000034.1                  I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40482 13 -     48117 -----TTCT--T-A--------GA-G-A-A-A-G
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 2 C 0
s Miopithecus_ogouensis.k141_1534655                         21206 14 -     27822 T--T-T--T--T-T--------AAAA-G-A-A-A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7386 13 +     27589 T--T-C--T--T-G--------AA-G-A-A-C-A
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 4 C 0
s Mirza_zaza.k141_766280                                     51252 14 -     62432 T--T-T--T--T-T--------AAA-GA-A-A-G
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351962 14 +    437263 T--T-T--T-CG-T--------AA-G-A-A-A-G
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177642 15 +    366855 T--T-TTCT--T-A--------AA-G-A-A-A-G
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23176 14 -     82753 T--T-T--T-CT-T--------AA-G-A-A-C-G
i Moschus_moschiferus.MosMos_scaffold_13123              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17393 13 -     63510 T--C-C--T--T-A--------AA-G-A-A-T-G
i Mungos_mungo.MunMun_flattened_line_18455               I 1 C 0
s Murina_feae.MurFea_scaffold_17764                          37517 15 +     47283 T--T-TTCT--T-A--------AA-G-A-A-A-T
i Murina_feae.MurFea_scaffold_17764                      I 1 C 0
s Mus_caroli.LT608237.1                                   35591763 13 + 120012414 t--t-t--t--a-a--------aa-g-a-a-t-a
i Mus_caroli.LT608237.1                                  I 1 C 0
s Mus_musculus.chr8                                       41686121 13 + 129401213 t--t-t--t--a-a--------aa-g-a-a-t-a
i Mus_musculus.chr8                                      I 1 C 0
s Mus_pahari.LT608297.1                                   58216008 13 +  89631738 t--c-t--t--a-a--------aa-g-a-a-t-a
i Mus_pahari.LT608297.1                                  I 1 C 0
s Mus_spretus.CM004101.1                                  39495441 13 + 130317789 t--t-t--t--a-a--------aa-g-a-a-t-a
i Mus_spretus.CM004101.1                                 I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81628 13 -     86153 T--T-T--T--T-A--------AA-G-A-A-A-G
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 1 C 0
s Myotis_brandtii.KE162005.1                               9791566 15 +  10118263 T--T-TTCT--T-A--------AA-G-A-A-T-G
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                4385926 15 +   6019432 g--t-ttct--t-a--------aa-g-A-A-A-G
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                               381745 15 +   4330536 t--t-ttct--t-a--------aa-g-a-a-a-g
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          575 15 +     18357 T--T-TTCT--G-A--------AA-G-A-A-A-G
i Myotis_myotis.MyoMyo_scaffold_66571                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118456 13 +    130748 T--T-T--T--T-A--------AA-G-G-A-A-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 1 C 0
s Nannospalax_galili.KL204047.1                             944917 13 +   3037898 t--a-t--t--t-a--------aa-g-A-A-A-G
i Nannospalax_galili.KL204047.1                          I 1 C 0
s Nasalis_larvatus.k141_1350636                              27872 14 +     34575 T--T-T--T--C-T--------TAAA-G-A-A-A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467981 13 -  31847680 t--t-c--t--t-a--------aa-g-a-a-c-a
i Neomonachus_schauinslandi.NINY01007730.1               I 3 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226131 14 -   7148211 T--T-T--T-CG-T--------AA-G-A-A-A-G
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126429 15 -    149072 T--T-CCCT--T-A--------AA-G-A-A-A-G
i Noctilio_leporinus.NocLep_scaffold_7894                I 1 C 0
s Nomascus_annamensis.k141_1771965                           52605 14 -    132029 T--T-T--T--T-T--------AAAG-A-A-A-G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8700 14 -     16345 T--T-T--T--T-T--------AAAG-A-A-A-G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14585 14 +     22201 T--T-T--T--T-T--------AAAG-A-A-A-G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412806 14 -  22158432 T--T-T--T--T-T--------AAAG-A-A-A-G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24983 14 -     54323 T--T-T--T--T-T--------AAAG-A-A-A-G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197106 13 +   9404916 t--t-c--t--t-a--------aa-g-a-a-c-a
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Nycticebus_bengalensis.LG01                             93635127 14 + 196305487 T--T-T--T--T-T--------GAAG-A-A-A-G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1885 14 -      3937 T--T-T--T--T-T--------GAAG-A-A-A-G
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563366 14 - 199412804 T--T-T--T--T-T--------AAAG-A-A-A-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550068 13 -   3988456 T--T-T--T--T-A--------CA-G-C-A-a-g
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Octodon_degus.JH651603.1                                11052921 12 -  11899542 t--t-t--t--t-a--------ca---a-t-t-g
i Octodon_degus.JH651603.1                               I 1 I 166
s Odobenus_rosmarus.KB229312.1                             1450577 13 +   2017862 t--t-c--t--t-a--------aa-g-a-a-c-a
i Odobenus_rosmarus.KB229312.1                           I 2 C 0
s Odocoileus_virginianus.KZ100018.1                         435019 14 -    630418 T--T-T--T-CT-T--------AA-G-A-A-A-G
i Odocoileus_virginianus.KZ100018.1                      I 1 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13011 14 +    150152 T--T-T--T-CT-T--------AA-G-A-A-A-G
i Okapia_johnstoni.LVCL01S0005463.1                      I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91588 13 -    140218 C--T-T--T--T-A--------AA-G-A-A-A-G
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2447 13 -     41509 C--T-T--T--T-A--------AA-C-A-A-A-G
i Onychomys_torridus.OnyTor_scaffold_28377               I 1 C 0
s Orcinus_orca.KB316932.1                                  8095401 14 +  10937097 T--T-T--T-CG-T--------AA-G-A-A-A-G
i Orcinus_orca.KB316932.1                                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12477 13 -     14239 T--T-T--T--T-A--------AA-G-A-A-A-G
i Orycteropus_afer.OryAfe_flattened_line_171931          I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102540 13 - 174332312 c--t-t--t--t-a--------ag-g-g-a-a-G
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38152 13 +    559221 t--t-c--t--t-a--------aa-g-a-a-c-a
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_649260                        38527 14 -     51505 T--T-T--T--T-T--------AAAG-A-A-A-G
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351530 14 +   1103335 t--t-t--t--t-t--------aaag-a-a-a-g
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403001 14 -  44047080 T--A-T--T-Ct-t--------aa-g-a-a-a-g
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3520 14 +     17875 T--A-T--T-CT-T--------AA-G-A-A-A-G
i Ovis_canadensis.OviCan_scaffold_67953                  I 1 C 0
s Pan_troglodytes.CM009242.2                               1471701 14 - 189151597 t--t-t--t--t-t--------aaag-a-a-a-g
i Pan_troglodytes.CM009242.2                             I 5 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23323 13 -    230217 T--C-C--T--T-A--------AA-G-A-A-T-G
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                              18460649 13 -  18783137 T--C-C--T--T-A--------AA-G-A-A-T-G
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               3971369 13 +   8748460 T--C-C--T--T-A--------AA-G-A-A-T-G
i Panthera_tigris.KE722367.1                             I 1 C 0
s Pantholops_hodgsonii.KE114653.1                          1614443 14 +   2937107 T--A-T--Tc-t-t--------aa-g-a-a-a-g
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                   242034 14 - 183742232 t--t-t--t--t-t--------aaaa-g-a-a-a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8498 14 +     21308 T--T-T--T--T-T--------AAAA-G-A-A-A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291070 14 -  20919399 T--T-T--T--T-T--------AAAA-G-A-A-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21153 14 -     27687 T--T-T--T--T-T--------AAAA-G-A-A-A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14289 14 +     16796 T--T-T--T--T-T--------AAAA-G-A-A-A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21099 14 -     23640 T--T-T--T--T-T--------AAAA-G-A-A-A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13962 13 +     78924 T--C-C--T--T-A--------AA-G-A-A-T-G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perodicticus_ibeanus.k141_1921260                          24811 11 +     31479 A--T-T--T--T-T--------AAAG-A------
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17175 14 -     24908 A--T-T--T--T-T--------AAAG-A-A-A-G
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         537  9 +      9367 C--T-T--A--A-A--------AA-A--------
i Perognathus_longimembris.PerPac_flattened_line_89005   I 1 I 4
s Peromyscus_maniculatus.KI615324.1                         245668 13 +  18517816 C--T-T--T--T-A--------AA-G-A-A-A-G
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30754 12 -     56120 A--T-T--T--T-A--------AA---A-C-T-G
i Petromus_typicus.PetTyp_scaffold_17301                 I 1 I 158
s Phocoena_phocoena.PhoPho_flattened_line_46867              11259 14 -     15039 T--T-T--T-CG-T--------AA-G-A-A-A-G
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 1 C 0
s Piliocolobus_badius.k141_2704958                            1320 14 +     55023 T--T-T--T--T-T--------TAAA-G-A-A-A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          871 14 -     89929 T--T-T--T--T-T--------TAAA-G-A-A-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1459 14 +     40849 T--T-T--T--T-T--------TAAA-G-A-A-A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253126 14 +  14605196 t--t-t--t--t-t--------taaa-g-a-a-a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2117 16 +     22231 TT-T-TTTT--T-A--------AA-G-A-A-A-G
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 421 C 0
s Pithecia_albicans.k141_1239476                             63762 14 +    207309 T--T-T--T--T-T--------AAAG-A-A-A-G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4856 14 -     25401 T--T-T--T--T-T--------AAAG-A-A-A-G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30597 14 +     58159 T--T-T--T--T-T--------AAAG-A-A-A-G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30873 14 +     63561 T--T-T--T--T-T--------AAAG-A-A-A-G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30636 14 +     51148 T--T-T--T--T-T--------AAAG-A-A-A-G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555603 14 -   4542175 T--T-T--T--T-T--------AAAG-A-A-A-G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30620 14 +     51125 T--T-T--T--T-T--------AAAG-A-A-A-G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3343 14 -      8168 T--T-T--T-CA-T--------AA-G-A-A-A-G
i Platanista_gangetica.PlaMin_flattened_line_167872      I 1 C 0
s Plecturocebus_bernhardi.k141_2549090                        7024 14 +     39866 T--T-T--T--T-T--------AAAG-A-A-A-G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2109 14 -      9282 T--T-T--T--T-T--------AAAG-A-A-A-G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41516 10 -     87950 -----------T-T--------AAAG-A-A-A-G
i Plecturocebus_caligatus.k141_1382851                   I 3 C 0
s Plecturocebus_cinerascens.k141_1164729                     41906 14 -     88961 T--T-T--T--T-T--------AAAG-A-A-A-G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6605 13 -     39403 ---T-T--T--T-T--------AAAG-A-A-A-G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41557 14 +     87928 T--T-T--T--T-T--------AAAG-A-A-A-G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6602 14 -     60166 T--T-T--T--T-T--------AAAG-A-A-A-G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13538 14 -     67232 T--T-T--T--T-T--------AAAG-A-A-A-G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41454 14 -     90634 T--T-T--T--T-T--------AAAG-A-A-A-G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42922 14 +     89403 T--T-T--T--T-T--------AAAG-A-A-A-G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176825 14 - 189387572 t--t-t--t--t-t--------aaag-a-a-a-g
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191642 14 -   9816681 T--T-T--T--T-T--------AAAG-A-A-A-G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26456 12 +     69807 T--T-T--T--C-T--------TAAA-G-G----
i Presbytis_comata.k141_1230337                          C 0 I 2
s Presbytis_mitrata.k141_584736                              43648 14 -     80239 T--T-T--T--C-T--------TAAA-G-A-A-A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981479 14 +   4620579 t--t-t--t--t-t--------aaag-a-a-a-g
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564945 15 -   2598838 g--t-t--t--t-t--------aaaaga-a-a-g
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2581 15 -      7103 G--T-T--T--T-T--------AAAAGA-A-A-G
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3178 15 -     11706 G--T-T--T--T-T--------AAAAGA-A-A-G
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6914 15 -     30655 G--T-T--T--T-T--------AAAAGA-A-A-G
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33239 15 +     46564 G--T-T--T--T-T--------AAAAGA-A-A-G
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93510 15 -     98465 G--T-T--T--T-T--------AAAAGA-A-A-G
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7147 15 +     35169 G--T-T--T--T-T--------AAAAGA-A-A-G
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            35469 11 +     52041 C--T-T--T--A-A-----------C-A-A-T-G
i Psammomys_obesus.NESX01036366.1                        I 1 C 0
s Pteronotus_parnellii.KE847780.1                            50524 15 -     66298 t--t-ttct--t-a--------aa-g-a-a-a-g
i Pteronotus_parnellii.KE847780.1                        I 1 C 0
s Pteropus_alecto.KB030862.1                               5839777 11 -  28871421 t--t-ttct--t-a--------aa-t--------
i Pteropus_alecto.KB030862.1                             I 1 I 1
s Pteropus_vampyrus.KN525825.1                             3536286 11 -   4952924 t--t-ttct--t-a--------aa-t--------
i Pteropus_vampyrus.KN525825.1                           I 1 I 1
s Puma_concolor.QAVW01001104.1                            18097963 13 +  38429054 T--C-C--T--T-A--------AA-G-A-A-T-G
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             25825 14 +     91421 T--T-T--T--C-T--------TAAA-G-A-A-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152319 14 -   7812017 T--T-T--T--C-T--------TAAA-G-A-A-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6696 14 +     72585 T--T-T--T--C-T--------TAAA-G-A-A-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51940 14 +     55069 T--T-T--T-CT-T--------AA-G-A-A-A-G
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 1 C 0
s Rattus_norvegicus.chr16                                 37021366 13 -  90668790 t--t-t--t--a-a--------aa-g-a-a-t-g
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913666 14 +   3329780 t--t-ttct--t-a--------aa-t-a-a-a--
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_778604                              400 14 +      7119 T--T-T--T--C-T--------TAAA-G-A-A-A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121010 14 + 195417433 t--t-t--t--c-t--------taaa-g-a-a-a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235251 14 -   7961872 T--T-T--T--C-T--------TAAA-G-A-A-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73699 11 -    116970 T--T-TTCT--T-A--------AA-T--------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 1 I 1
s Saguinus_bicolor.k141_1429097                               2903 12 +     27962 T--T-T--T--T-T--------TAAA-G-A----
i Saguinus_bicolor.k141_1429097                          C 0 I 3
s Saguinus_geoffroyi.k141_3779887                             2798 12 +      6077 T--T-T--T--T-T--------TAAA-G-A----
i Saguinus_geoffroyi.k141_3779887                        C 0 I 3
s Saguinus_imperator.k141_1898058                             2889  9 +      5971 T--T-T--T--T-T--------AAA---------
i Saguinus_imperator.k141_1898058                        C 0 I 5
s Saguinus_labiatus.k141_2380921                              1154  8 -      4390 ---T-T--T--T-T--------AAA---------
i Saguinus_labiatus.k141_2380921                         C 0 I 5
s Saguinus_midas.LG03                                       390587 13 - 209938924 TT-T-T--T--T-T--------TAAA-G-A----
i Saguinus_midas.LG03                                    C 0 I 3
s Saguinus_oedipus.k141_1466288                               3521 12 -      4301 T--T-T--T--T-T--------TAAA-G-A----
i Saguinus_oedipus.k141_1466288                          C 0 I 4
s Saiga_tatarica.SaiTat_scaffold_39512                        6593 14 +     16473 T--A-T--T-CT-T--------AA-G-A-A-A-C
i Saiga_tatarica.SaiTat_scaffold_39512                   I 1 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107925 20 + 121099817 t--t-t--t--t-tttttaaaagaaa-g-a----
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29487 19 -     47369 T--T-T--T--T-T-TTTAAAAGAAA-G-A----
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29876 19 -     79414 T--T-T--T--T-T-TTTTAAAGAAA-G-A----
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26568 18 -     34454 T--T-T--T--T-T--TTTAAAGAAA-G-A----
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13974 19 -     22428 T--T-T--T--T-T-TTTTAAAGAAA-G-A----
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29119 19 -     47109 T--T-T--T--T-T-TTTAAAAGAAA-G-A----
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237186 12 +   5703754 T--T-T--T--T-T--------AATA-T-A----
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6776 12 +     21866 T--T-T--T--T-T--------AATA-T-A----
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114888  6 +    313613 -----------------------T-T-A-A-A-G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 6 C 0
s Semnopithecus_entellus.k141_158471                         24143 14 +     27374 T--T-T--T--C-T--------TAAA-G-A-A-A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27661 14 +     58920 T--T-T--T--C-T--------TAAA-G-A-A-A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14157 14 -     45317 T--T-T--T--C-T--------TAAA-G-A-A-A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21816 14 -     42441 T--T-T--T--C-T--------TAAA-G-A-A-A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24496 14 -     29113 T--T-T--T--C-T--------TAAA-G-A-A-A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27565 14 -     48123 T--T-T--T--C-T--------TAAA-G-A-A-A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48076 13 +     77746 C--A-T--T--T-A--------AA-G-A-A-A-G
i Sigmodon_hispidus.SigHis_scaffold_20193                I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857197 13 -   1910179 T--T-T--C--T-T--------TT-G-A-A-A-G
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1867200 13 +   3870691 t--t-t--t--a-a--------aa-g-a-a-a-g
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5556 13 -     97271 T--T-C--T--T-A--------AA-G-A-A-C-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 207 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123800 13 +    196729 T--C-C--T--T-A--------AA-G-A-A-T-G
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                    6640012 13 +  69701581 t--t-c--t--t-t--------tt-t-t-a-a-t
i Sus_scrofa.CM000828.4                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_199                       390067 14 +   1523678 T--T-T--T--T-T--------AAAG-A-A-A-G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12504 15 +     22964 T--T-TTCT--T-A--------AA-G-A-A-A-G
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1572 13 +      5583 T--T-T--T--T-A--------AA-G-C-G-A-T
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 1 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190480 15 +    199430 T--T-T--TCTT-A--------CA-G-A-A-A-G
i Tapirus_indicus.TapInd_scaffold_7432                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104432 15 -    539355 T--T-T--TCTT-A--------AA-G-A-A-A-G
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_1780720                                5774 14 +      6850 T--T-T--T--T-A--------AAAG-A-A-A-G
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5825 14 +     20590 T--T-T--T--T-A--------AAAG-A-A-A-G
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352022 14 - 186847797 t--t-t--t--t-t--------aaaa-g-a-a-a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23081 12 -     33621 A--T-T--T--A-A--------AA---A-T-T-C
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 1 I 141
s Tolypeutes_matacus.TolMat_scaffold_31955                   18696 13 -     31044 T--T-T--T--T-A--------AA-G-A-G-A-G
i Tolypeutes_matacus.TolMat_scaffold_31955               I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478550 15 -    610378 T--T-CTCT--T-A--------AA-G-A-A-A-G
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_1189070                        19702 11 +     26378 T--T-T--T--C-T--------TAAA-G------
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32371 14 -     78344 T--T-T--T--C-T--------TAAA-G-A-A-A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19023 14 +     25722 T--T-T--T--C-T--------TAAA-G-A-A-A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27322 14 -     62838 T--T-T--T--C-T--------TAAA-G-A-A-A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27368 15 +     46913 T--T-TT-T--C-T--------TAAA-G-A-A-A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8176 14 -     28527 T--T-T--T--C-T--------TAAA-G-A-A-A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29261 14 -     64340 T--T-T--T--C-T--------TAAA-G-A-A-A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27298 14 -     63452 T--T-T--T--C-T--------TAAA-G-A-A-A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8741 14 +     22490 T--T-T--T--C-T--------TAAA-G-A-A-A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2169 14 -      6147 T--T-T--T--C-T--------TAAA-G-A-A-A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9073 14 -     13050 T--T-T--T--C-T--------TAAA-G-A-A-A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254313 14 -   6242583 T--T-T--T--C-T--------TAAA-G-A-A-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         337 14 +     19340 T--T-T--T--C-T--------TAAA-G-A-A-A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172209 14 -    200418 T--T-T--T-CT-T--------AA-G-A-A-A-G
i Tragulus_javanicus.TraJav_scaffold_3462                I 1 C 0
s Trichechus_manatus.JH594705.1                            6479321 13 -  10818551 t--t-t--t--t-a--------ag-g-a-a-a-t
i Trichechus_manatus.JH594705.1                          I 1 C 0
s Tupaia_chinensis.KB320699.1                              1832724  8 -   4065304 t--t-t--t--t-g--------aa----------
i Tupaia_chinensis.KB320699.1                            I 1 I 1
s Tupaia_tana.TupTan_flattened_line_394                       7040 13 -     70247 T--T-T--T--T-G--------AA-G-A-A-A-G
i Tupaia_tana.TupTan_flattened_line_394                  I 1 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360140 14 -  33153633 T--T-T--T-CG-T--------AA-G-A-A-A-G
i Tursiops_truncatus.MRVK01000835.1                      I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    1340 13 -     21056 T--T-T--T--T-T--------AT-T-A-A-A-G
i Uropsilus_gracilis.UroGra_scaffold_46687               I 1 C 0
s Ursus_maritimus.KK499267.1                                180735 13 +   5085361 t--t-c--t--t-a--------aa-g-a-a-c-a
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_787544                                  24123 14 -     30710 T--T-T--T--T-T--------AAAG-A-A-A-G
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23030 14 -    147434 T--T-T--T--T-T--------AAAG-A-A-A-G
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75220  7 +   5488506 ----------------------ct-t-a-a-a-g
i Vicugna_pacos.KN270157.1                               I 5 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103874 13 -    112863 T--T-C--T--T-A--------AA-G-A-A-C-A
i Vulpes_lagopus.VulLag_flattened_line_12041             I 1 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172978 13 -    224448 T--T-T--T--T-A--------AA-G-A-A-A-G
i Xerus_inauris.XerIna_scaffold_2302                     I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27775 13 -     86975 T--T-C--T--T-A--------AA-G-A-A-C-A
i Zalophus_californianus.ZalCal_flattened_line_17732     I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2259  6 +      2695 T--T-T--T--A-G--------------------
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 1 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3582 13 -     18639 I
e Mustela_putorius.JH418006.1                             14354015 13 +  14710649 I
e Mellivora_capensis.MelCap_flattened_line_19308             24868 227 -     74585 I
e Enhydra_lutris.KZ291758.1                               24914979 13 +  41312741 I
e Saguinus_mystax.k141_8077960                                2778  0 +      5979 C
e Saguinus_inustus.k141_2469308                               2829  0 +      5932 C
e Hystrix_cristata.HysCri_scaffold_5660                       2742 286 -    135385 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751  0 -    498745 C
e Equus_caballus.CM000403.2                               21373965  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041  0 -   4378816 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4362  2 +     36723 A--------------------------T
s Acinonyx_jubatus.LLWD01001279.1                           811715  2 +   1699592 A--------------------------T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18794  2 +     63021 G--------------------------C
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414242  2 +  29979442 a--------------------------T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214552  2 +    347723 a--------------------------t
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16833  2 -     61208 G--------------------------T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46687  2 +     53615 G--------------------------G
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42632  6 +     44087 G----------------------TTTTT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15269  6 -     21945 G----------------------GTTTT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16942  6 +     32033 G----------------------TTTTT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71136  2 -     84148 A--------------------------G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43375  2 -     78289 G--------------------------T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42814  2 +     55831 A--------------------------G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41265  2 -     64179 G--------------------------T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22904  2 -     24835 G--------------------------T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39890  2 +     45454 G--------------------------T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45535  2 +     70886 A--------------------------G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7712  2 +     30854 G--------------------------T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31848  2 +     42133 G--------------------------T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584076  2 +   2318259 a--------------------------t
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175526  2 -    412891 G--------------------------T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49175  2 -     68529 A--------------------------T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14873  2 -     32367 A--------------------------T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3814  2 -     15198 T--------------------------T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 1 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273598  2 +  21539123 A--------------------------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9765  2 +     48076 A--------------------------T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4901  2 -     28759 A--------------------------T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32455  2 +     44353 A--------------------------T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47826  2 -     71267 A--------------------------T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21885  2 -     33135 A--------------------------T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5076  6 +     11645 A----------------------TTGTT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5082  6 -     19611 A----------------------TTGTT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955904  2 -  23207421 T--------------------------T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3113  2 -      4711 T--------------------------T
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85071  2 +    124022 A--------------------------T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20604  2 +    288883 A--------------------------T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20354991  2 +  48749331 A--------------------------T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753559  2 +   1948126 A--------------------------T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543698  2 -  45695690 A--------------------------T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528722  2 -   4408762 A--------------------------T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6786  2 +     28062 A--------------------------T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42080  2 -     91139 A--------------------------T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19606  2 +     95584 A--------------------------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19519  2 +    119600 A--------------------------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629893  2 +  17673402 a--------------------------a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664179  2 +   7040546 a--------------------------a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207839  2 +   1652518 a--------------------------a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504257  2 +  60362399 A--------------------------T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7893  2 -     23171 A--------------------------T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221236  2 +   9314153 a--------------------------T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614371  2 +  59632846 a--------------------------T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105952  2 -  63665305 a--------------------------T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407788  2 -  46296322 a--------------------------t
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590061  2 +  44709034 A--------------------------T
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_108409                   6891  2 +      8835 A--------------------------C
i Capromys_pilorides.CapPil_scaffold_108409              I 160 C 0
s Carlito_syrichta.NW_007259797.1                           269162  2 +    496798 a--------------------------t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               4107  2 +      5315 T--------------------------T
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     75565  2 -    217609 t--------------------------t
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994963  2 +  23392119 G--------------------------T
i Cavia_aperea.AVPZ01000300.1                            I 141 C 0
s Cavia_porcellus.DS562891.1                               4998405  2 +  23407841 G--------------------------T
i Cavia_porcellus.DS562891.1                             I 141 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61506  2 -     66877 G--------------------------T
i Cavia_tschudii.CavTsc_scaffold_23560                   I 141 C 0
s Cephalopachus_bancanus.k141_1689090                         1093  2 -      5494 A--------------------------T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491043  2 -  27778364 t--------------------------t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17876  2 +     27315 T--------------------------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139863  2 -   4669795 g--------------------------g
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43604  2 +     47900 G--------------------------G
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43436  2 -     44860 G--------------------------G
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43419  2 -    148725 G--------------------------G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25642  2 -     40656 G--------------------------G
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5611  2 +     20796 G--------------------------G
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10681  2 -     17524 G--------------------------G
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26402  2 -     34525 G--------------------------G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10232  2 -     25376 G--------------------------G
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362827  2 -  39242232 G--------------------------G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268539  2 +  21565898 G--------------------------G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30877  2 -     45857 G--------------------------G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25815  2 -     32606 G--------------------------G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1972  2 +      8499 G--------------------------G
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24372  2 +     70610 G--------------------------G
i Cercopithecus_pogonias.k141_6079                       I 3 C 0
s Cercopithecus_roloway.k141_3012935                         21296  2 +     36323 G--------------------------G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11675  2 -     19938 A--------------------------T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29495  6 -     33796 A----------------------TTATT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4012  6 -     15404 A----------------------TTATT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7870  2 -     32913 A--------------------------T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18283  2 -     40346 A--------------------------T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18538  2 +    216457 A--------------------------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18331  2 +     39636 A--------------------------T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237443  2 -   2543920 A--------------------------C
i Chinchilla_lanigera.JH722012.1                         I 157 C 0
s Chiropotes_albinasus.k141_1946120                           2920  2 +      5346 A--------------------------T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41414  2 -    112038 A--------------------------T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6986  2 +     34062 A--------------------------T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342191  2 +  18827391 G--------------------------T
i Chlorocebus_aethiops.ctg25                             C 0 I 1
s Chlorocebus_pygerythrus.k141_3063162                        8737  2 -     44032 G--------------------------T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 I 2
s Chlorocebus_sabaeus.CM001947.1                            303516  2 - 135778131 g--------------------------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 1
s Choloepus_didactylus.ChoDid_scaffold_70559                 12991  2 +     15858 A--------------------------T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            604567  2 -    839153 a--------------------------t
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407962  2 -   2368649 g--------------------------t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377836  2 - 200372422 G--------------------------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1386  2 -     84244 G--------------------------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806104  2 +  53390261 G--------------------------T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41107  2 -     83289 G--------------------------C
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113555  2 - 224834208 g--------------------------t
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3176  2 +     87169 G--------------------------T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643799  2 -   1526836 T--------------------------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 178 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16431  2 +     50838 A--------------------------T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 157 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2909  2 +     36344 a--------------------------T
i Cuniculus_paca.CunPac_flattened_line_7025              I 170 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26666  2 +     75252 G--------------------------T
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 154 C 0
s Dasypus_novemcinctus.JH564415.1                          2109018  2 -   2246927 g--------------------------t
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291447  6 +  12879189 A----------------------TTATT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624233  2 -  35494412 T--------------------------T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863556  2 -  20541912 C--------------------------T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663334  2 -   1390856 a--------------------------t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138120  2 -    198055 A--------------------------T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97478  2 -    115145 A--------------------------T
i Dinomys_branickii.DinBra_scaffold_10381                I 160 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8932  2 +     14636 G--------------------------T
i Dolichotis_patagonum.DolPat_scaffold_80628             I 145 C 0
s Echinops_telfairi.JH980293.1                            62853161 28 - 111700974 actgtttaaagaattaaaaaaatcattt
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5139  1 +     19438 ---------------------------t
i Eidolon_helvum.AWHC01266696.1                          I 1 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238462  2 -    607251 A--------------------------T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107390  2 -  10337057 a--------------------------g
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29830  2 +    110024 g--------------------------t
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11805  2 +     18970 g--------------------------t
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577184  2 +  14770903 A--------------------------T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                               261717  2 +  21539334 G--------------------------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63783  2 -    133382 T--------------------------T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4000  2 +      7672 T--------------------------T
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13619  6 -     24895 T----------------------TTATT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41328  6 -     70999 T----------------------TTATT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85290  6 +    112731 T----------------------TTATT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41863  6 +     68309 T----------------------TTATT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52185  6 -     65740 T----------------------TTATT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22818  6 -     75513 T----------------------TTATT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47011  6 -     97555 T----------------------TTATT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3736  6 +     30972 T----------------------TTATT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41458  6 -     52037 T----------------------TTATT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57862  6 -    111500 T----------------------TTATT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245628  2 - 206538554 A--------------------------T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115413  2 - 205367284 A--------------------------T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26515  2 -     30238 A--------------------------T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123388  2 -    137831 A--------------------------T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6933  2 +     22493 A--------------------------T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18984  2 -     32986 A--------------------------T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17940  2 +     18121 A--------------------------T
i Galeopterus_variegatus.GalVar_scaffold_74466           I 12 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90141  2 -     95226 A--------------------------T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33061  2 -     36801 A--------------------------T
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4680  2 -      8343 A--------------------------T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253691  2 - 186649187 a--------------------------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     558  2 -     78134 A--------------------------T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13545  6 -     40692 A----------------------TTATT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34947  6 +     49394 A----------------------TTATT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59816  6 -     66874 A----------------------TTATT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8689  6 -     42923 A----------------------TTATT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15689  6 -     53142 A----------------------TTATT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29653  2 -    327341 G--------------------------C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7895  2 +     48891 A--------------------------T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1926081  2 -  22651954 a--------------------------t
i Heterocephalus_glaber.JH602082.1                       I 166 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6496  2 -     36432 C--------------------------T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49663  1 +     49977 ---------------------------A
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141697  2 -    630532 G--------------------------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68572  2 +     83186 G--------------------------T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70350  2 +    143317 G--------------------------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 135 C 0
s Hylobates_agilis.k141_1155965                               4727  2 +     12352 G--------------------------T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11911  2 +     55766 G--------------------------T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051509  2 + 191637585 G--------------------------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800387  2 +  11177569 G--------------------------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3028  2 -    135385 a--------------------------T
i Hystrix_cristata.HysCri_scaffold_5660                  I 286 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385634  2 +   7955117 a--------------------------t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1199  6 +     11955 A----------------------TTATT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2020  2 -     16823 T--------------------------T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238017  2 +   9596543 g--------------------------T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64504  1 -     97402 T---------------------------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 6
s Lagothrix_lagothricha.k141_246028                          42142  2 +    110728 A--------------------------T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61050  2 -     65777 A--------------------------T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758338  6 +  30322482 A----------------------TTATT
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7867  6 +     29618 A----------------------TTATT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7863  6 +     31569 A----------------------TTATT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7873  6 +     24756 A----------------------TTATT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7873  6 +     16388 A----------------------TTATT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812391  2 -   3914936 a--------------------------t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16717  2 +     24238 G--------------------------T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333540  2 +    662738 T--------------------------T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               331821  2 -   1826925 G--------------------------G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9145  2 +     19643 A--------------------------T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042806  2 -   6120653 A--------------------------T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079874  2 +  43346337 a--------------------------T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613526  2 +  59628241 a--------------------------T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44138  2 -     61512 G--------------------------G
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371798  2 -  60120075 G--------------------------G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24051  2 +     30207 G--------------------------G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21154  2 -     24934 G--------------------------G
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24004  2 +     30527 G--------------------------G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35190  2 -     50087 G--------------------------G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_mulatta.NC_041758.1                                414134  2 - 187317192 g--------------------------g
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398357  2 +  25927173 g--------------------------c
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47521  2 -     62418 G--------------------------G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                   63  2 +     14901 A--------------------------G
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 43996  2 +     59329 G--------------------------G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269920  2 +    668171 G--------------------------G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  179  2 +      1732 G--------------------------G
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1708  2 +     17132 G--------------------------G
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222104  1 -    270270 ---------------------------T
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                        321208  2 +  24302211 G--------------------------G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356040  2 -    752769 G--------------------------G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672417  2 -    737560 a--------------------------t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219704  2 +    317179 a--------------------------t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499855  2 +  40650429 a--------------------------t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149264  1 +    207569 ---------------------------T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47907  2 -    140813 G--------------------------T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428106  2 +  29670104 g--------------------------t
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80086  2 +     93471 T--------------------------T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983477  6 +  93316391 a-t-t--a-----t-------------t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44256  2 +    145209 a--------------------------t
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183497  2 +    200668 G--------------------------T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961242  2 +  27267610 g--------------------------t
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361594  2 -   8254450 A--------------------------T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40495  2 -     48117 A--------------------------T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21220  2 -     27822 G--------------------------G
i Miopithecus_ogouensis.k141_1534655                     C 0 I 8
s Mirounga_angustirostris.MirAng_flattened_line_54046         7399  2 +     27589 A--------------------------T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51266  6 -     62432 A----------------------TTATT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351976  2 +    437263 T--------------------------T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177657  2 +    366855 A--------------------------T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23190  2 -     82753 A--------------------------T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17406  2 -     63510 G--------------------------C
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37532  2 +     47283 A--------------------------T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35591776  2 + 120012414 g--------------------------c
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686134  2 + 129401213 g--------------------------c
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216021  2 +  89631738 g--------------------------c
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495454  2 + 130317789 g--------------------------c
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81641  2 -     86153 A--------------------------T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Myotis_brandtii.KE162005.1                               9791581  2 +  10118263 A--------------------------T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385941  2 +   6019432 A--------------------------T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381760  2 +   4330536 a--------------------------t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          590  2 +     18357 A--------------------------T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118469  2 +    130748 A--------------------------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             944930  2 +   3037898 G--------------------------C
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              27886  2 +     34575 G--------------------------G
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467994  2 -  31847680 a--------------------------T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226145  2 -   7148211 T--------------------------T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126444  2 -    149072 G--------------------------T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52619  2 -    132029 G--------------------------T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8714  2 -     16345 G--------------------------T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14599  2 +     22201 G--------------------------T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412820  2 -  22158432 G--------------------------T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24997  2 -     54323 G--------------------------T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197119  2 +   9404916 a--------------------------T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635141  2 + 196305487 A--------------------------T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1899  2 -      3937 A--------------------------T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563380  2 - 199412804 A--------------------------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550081  2 -   3988456 g--------------------------t
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053099  2 -  11899542 A--------------------------T
i Octodon_degus.JH651603.1                               I 166 C 0
s Odobenus_rosmarus.KB229312.1                             1450590  2 +   2017862 a--------------------------T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435033  2 -    630418 A--------------------------T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13025  2 +    150152 A--------------------------T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91601  2 -    140218 G--------------------------T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2460  2 -     41509 G--------------------------T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095415  2 +  10937097 T--------------------------T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12490  2 -     14239 A--------------------------T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102553  2 - 174332312 G--------------------------T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38165  2 +    559221 a--------------------------T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38541  2 -     51505 A--------------------------T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351544  2 +   1103335 a--------------------------t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403015  2 -  44047080 a--------------------------t
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3534  2 +     17875 A--------------------------T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471715  2 - 189151597 g--------------------------t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23336  2 -    230217 A--------------------------T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460662  2 -  18783137 A--------------------------T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971382  2 +   8748460 A--------------------------T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614457  2 +   2937107 a--------------------------t
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242048  2 - 183742232 g--------------------------g
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8512  2 +     21308 G--------------------------G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291084  2 -  20919399 G--------------------------G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21167  2 -     27687 G--------------------------G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14303  2 +     16796 G--------------------------G
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21113  2 -     23640 G--------------------------G
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13975  2 +     78924 G--------------------------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24822  1 +     31479 ---------------------------T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17189  2 -     24908 A--------------------------T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245681  2 +  18517816 G--------------------------T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30924  2 -     56120 a--------------------------T
i Petromus_typicus.PetTyp_scaffold_17301                 I 158 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11273  2 -     15039 T--------------------------T
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1334  2 +     55023 G--------------------------G
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          885  2 -     89929 G--------------------------G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1473  2 +     40849 G--------------------------G
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253140  2 +  14605196 g--------------------------a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2133  2 +     22231 A--------------------------T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63776  2 +    207309 A--------------------------T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4870  2 -     25401 A--------------------------T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30611  2 +     58159 A--------------------------T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30887  2 +     63561 A--------------------------T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pithecia.tarseq_165                              555617  2 -   4542175 A--------------------------T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3357  2 -      8168 T--------------------------T
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7038  2 +     39866 A--------------------------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2123  2 -      9282 A--------------------------T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41526  2 -     87950 A--------------------------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41920  2 -     88961 A--------------------------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6618  2 -     39403 A--------------------------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41571  2 +     87928 A--------------------------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6616  2 -     60166 A--------------------------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13552  2 -     67232 A--------------------------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41468  2 -     90634 A--------------------------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42936  2 +     89403 A--------------------------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176839  2 - 189387572 g--------------------------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191656  2 -   9816681 G--------------------------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_mitrata.k141_584736                              43662  2 -     80239 G--------------------------G
i Presbytis_mitrata.k141_584736                          C 0 I 2
s Prolemur_simus.MPIZ01000396.1                            1981493  6 +   4620579 a-t-t--a-----t-------------t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564960  6 -   2598838 a-t-t-----g--t-------------t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2596  6 -      7103 A----------------------TTGTT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3193  6 -     11706 A----------------------TTGTT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6929  6 -     30655 A----------------------TTGTT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33254  6 +     46564 A----------------------TTGTT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93525  6 -     98465 A----------------------TTGTT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7162  6 +     35169 A----------------------TTGTT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            35480  2 +     52041 g--------------------------t
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50539  2 -     66298 g--------------------------t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                               5839789  1 -  28871421 ---------------------------t
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             3536298  1 -   4952924 ---------------------------t
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            18097976  2 +  38429054 A--------------------------T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25839  2 +     91421 G--------------------------G
i Pygathrix_cinerea.k141_1153803                         C 0 I 1
s Pygathrix_nigripes_b.ctg100                                  152333  2 -   7812017 G--------------------------G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6710  2 +     72585 G--------------------------G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51954  2 +     55069 A--------------------------T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021379  2 -  90668790 g--------------------------t
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913680  1 +   3329780 ---------------------------g
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              414  2 +      7119 G--------------------------G
i Rhinopithecus_bieti.k119_778604                        C 0 I 1
s Rhinopithecus_roxellana.NC_044550.1                    104121024  2 + 195417433 g--------------------------g
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 1
s Rhinopithecus_strykeri.ctg102                             235265  2 -   7961872 G--------------------------G
i Rhinopithecus_strykeri.ctg102                          C 0 I 1
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73711  1 -    116970 ---------------------------T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6607  2 +     16473 A--------------------------T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114894  2 +    313613 G--------------------------T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24157  2 +     27374 G--------------------------G
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27675  2 +     58920 G--------------------------G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14171  2 -     45317 G--------------------------G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21830  2 -     42441 G--------------------------G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24510  2 -     29113 G--------------------------G
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27579  2 -     48123 G--------------------------G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48089  2 +     77746 G--------------------------T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857210  2 -   1910179 A--------------------------T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867213  2 +   3870691 a--------------------------t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5569  2 -     97271 A--------------------------T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123813  2 +    196729 G--------------------------C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6640025  2 +  69701581 t--------------------------t
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390081  2 +   1523678 G--------------------------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12519  2 +     22964 A--------------------------T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1585  2 +      5583 A--------------------------T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190495  2 +    199430 A--------------------------T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104447  2 -    539355 A--------------------------T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5788  2 +      6850 A--------------------------T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5839  2 +     20590 A--------------------------T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352036  2 - 186847797 g--------------------------g
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23234  2 -     33621 a--------------------------t
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 141 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18709  2 -     31044 A--------------------------T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478565  2 -    610378 T--------------------------T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19713  1 +     26378 ---------------------------T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32385  2 -     78344 G--------------------------G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19037  2 +     25722 G--------------------------T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27336  2 -     62838 G--------------------------G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27383  2 +     46913 G--------------------------G
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8190  2 -     28527 G--------------------------G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29275  2 -     64340 G--------------------------G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27312  2 -     63452 G--------------------------G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8755  2 +     22490 G--------------------------G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2183  2 -      6147 G--------------------------G
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9087  2 -     13050 G--------------------------G
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254327  2 -   6242583 G--------------------------G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         351  2 +     19340 G--------------------------G
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172223  2 -    200418 A--------------------------T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479334  2 -  10818551 a--------------------------c
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832733  2 -   4065304 a--------------------------c
i Tupaia_chinensis.KB320699.1                            I 1 I 2
s Tupaia_tana.TupTan_flattened_line_394                       7053  2 -     70247 A--------------------------C
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 2
s Tursiops_truncatus.MRVK01000835.1                       17360154  2 -  33153633 T--------------------------T
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 6
s Ursus_maritimus.KK499267.1                                180748  2 +   5085361 a--------------------------T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24137  6 -     30710 A----------------------TTATT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23044  6 -    147434 A----------------------TTATT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75227  2 +   5488506 a--------------------------a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103887  2 -    112863 A--------------------------T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172991  2 -    224448 A--------------------------T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27788  2 -     86975 A--------------------------T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2265  2 +      2695 G--------------------------G
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Saimiri_ustus.k141_360372                                  29138  0 -     47109 C
e Saimiri_sciureus.k141_1467173                              13993  0 -     22428 C
e Saimiri_oerstedii.k141_245838                              26586  0 -     34454 C
e Saimiri_macrodon.k141_1173117                              29895  0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       29506  0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1107945  0 + 121099817 C
e Perognathus_longimembris.PerPac_flattened_line_89005         546  4 +      9367 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   4125  5 -     10735 I
e Dipodomys_ordii.KN672350.1                              18949178  5 -  37912305 I
e Callibella_humilis.k141_1233062                             9068  4 +     18648 I
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3582 13 -     18639 I
e Mustela_putorius.JH418006.1                             14354015 13 +  14710649 I
e Mellivora_capensis.MelCap_flattened_line_19308             24868 227 -     74585 I
e Enhydra_lutris.KZ291758.1                               24914979 13 +  41312741 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    1353  0 -     21056 C
e Sapajus_macrocephalus.k141_796559                           6788  0 +     21866 C
e Sapajus_apella.ctg103                                     237198  0 +   5703754 C
e Saguinus_oedipus.k141_1466288                               3533  4 -      4301 I
e Saguinus_mystax.k141_8077960                                2778  0 +      5979 C
e Saguinus_midas.LG03                                       390600  3 - 209938924 I
e Saguinus_labiatus.k141_2380921                              1162  5 -      4390 I
e Saguinus_inustus.k141_2469308                               2829  0 +      5932 C
e Saguinus_imperator.k141_1898058                             2898  5 +      5971 I
e Saguinus_geoffroyi.k141_3779887                             2810  3 +      6077 I
e Saguinus_bicolor.k141_1429097                               2915  3 +     27962 I
e Presbytis_comata.k141_1230337                              26468  2 +     69807 I
e Pithecia_vanzolinii.k141_1369553                           30634  0 +     51125 C
e Pithecia_pissinattii.k141_878371                           30650  0 +     51148 C
e Mico_schneideri.k141_1877700                                     17994  4 -     26561 I
e Mico_humeralifer.k141_1180625                               9680  4 -     12984 I
e Mico_argentatus.k141_582562                                 9178  4 +     17804 I
e Macaca_maura.k141_1103459                                  44957  3 +     51645 I
e Leontopithecus_rosalia.k141_349454                         10386  4 -     12945 I
e Leontopithecus_chrysomelas.k141_1327670                     9005  4 -     11567 I
e Leontocebus_nigricollis.k141_3905062                        2637  5 -      5717 I
e Leontocebus_illigeri.k141_2951200                           2807  5 +      5940 I
e Leontocebus_fuscicollis.k141_2994775                        3053  5 -     13097 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751  0 -    498745 C
e Equus_caballus.CM000403.2                               21373965  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041  0 -   4378816 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          1682  4 -      8242 I
e Cebus_unicolor.k141_1654760                                65965  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                6870  0 -     34880 C
e Cebus_albifrons.Contig27                                  369981  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               42043  4 +     53515 I
e Cebuella_niveiventris.k141_592277                           3988  4 -     12580 I
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Callithrix_kuhlii.k119_102356                                591  4 +      8664 I
e Callithrix_jacchus.pat_scaffold_3                      165453068  4 + 189096842 I
e Callithrix_geoffroyi.k119_459277                             675  4 -      8861 I
e Callimico_goeldii.k141_1609886                              8606  4 -     13885 I
e Aotus_vociferans.k141_944972                                8126  0 +      8415 C
e Aotus_trivirgatus.k141_192090                              22990  0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                671348  0 +   5030052 C
e Aotus_griseimembra.k141_982342                             43335  0 +     43593 C
e Aotus_azarae.k141_118258                                   49582  0 -     65372 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4364  6 +     36723 G-----T----T-T--------T----G
s Allenopithecus_nigroviridis.k141_3755588                   46689  6 +     53615 T-----T----T-T--------T----T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42638  6 +     44087 T-----T----T-T--------T----T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15275  6 -     21945 T-----T----T-T--------T----T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16948  6 +     32033 T-----T----T-T--------T----G
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Cercocebus_atys.KQ010504.1                                139865  6 -   4669795 t-----t----t-a--------t----t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43606  6 +     47900 T-----T----T-T--------T----T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43438  6 -     44860 T-----T----T-T--------T----T
i Cercocebus_lunulatus.k141_2779015                      C 0 I 2
s Cercocebus_torquatus.k141_2159127                          43421  6 -    148725 T-----T----T-T--------T----T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25644  6 -     40656 T-----T----T-T--------T----T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5613  6 +     20796 T-----T----T-T--------T----T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10683  7 -     17524 TG----T----T-T--------T----T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26404 11 -     34525 TGTGTTT----T-T--------T----T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10234  6 -     25376 T-----T----T-T--------T----T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362829  6 -  39242232 T-----T----T-T--------T----T
i Cercopithecus_albogularis.ctg5                               C 0 I 1
s Cercopithecus_mona.ctg39                                  268541  6 +  21565898 T-----T----T-T--------T----T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30879  5 -     45857 T-----T----T-T--------T-----
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25817  6 -     32606 T-----T----T-T--------T----T
i Cercopithecus_nictitans.k141_2995370                   C 0 I 1
s Cercopithecus_petaurista.k141_42573                         1974  6 +      8499 T-----T----T-T--------T----T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24374  5 +     70610 T-----T----T-T--------T-----
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21298  6 +     36323 T-----T----T-T--------T----T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chlorocebus_aethiops.ctg25                                342194  3 +  18827391 -------------T--------T----T
i Chlorocebus_aethiops.ctg25                             I 1 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8741  3 -     44032 -------------G--------T----T
i Chlorocebus_pygerythrus.k141_3063162                   I 2 C 0
s Chlorocebus_sabaeus.CM001947.1                            303519  3 - 135778131 -------------g--------t----t
i Chlorocebus_sabaeus.CM001947.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                             407964  6 -   2368649 t-----t----t-t--------t----t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377838  7 - 200372422 T-----T----T-T-------GT----T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1388  6 -     84244 T-----T----T-T--------T----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                               261719  6 +  21539334 T-----T----T-G--------T----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3358147                               4682  6 -      8343 G-----T----T-T--------T----G
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253693  6 - 186649187 g-----t----t-t--------t----g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    141699  6 -    630532 G-----T----T-T--------T----G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               4729  6 +     12352 G-----T----T-T--------T----G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11913  6 +     55766 G-----T----T-T--------T----G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051511  6 + 191637585 G-----T----T-T--------T----G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800389  6 +  11177569 G-----T----T-T--------T----G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               331823  6 -   1826925 T-----T----T-T--------T----T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              44140  6 -     61512 T-----G----T-T--------T----T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371800  2 -  60120075 T-----G---------------------
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24053  1 +     30207 T---------------------------
i Macaca_cyclopis.k119_263443                            C 0 I 7
s Macaca_fascicularis.k141_1397292                           21156  6 -     24934 T-----T----T-T--------T----T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24006  1 +     30527 T---------------------------
i Macaca_fuscata.k119_546792                             C 0 I 7
s Macaca_leonina.k141_321385                                 35192  6 -     50087 T-----T----T-T--------T----G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_mulatta.NC_041758.1                                414136  1 - 187317192 t---------------------------
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398359  6 +  25927173 t-----t----t-t--------t----t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47523 14 -     62418 T-----T----T-TTTTTTTTGT----T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                   65 10 +     14901 T-----TGTTTT-T--------T----T
i Macaca_radiata.k141_2139468                            C 0 I 35
s Macaca_siberu.k141_2185972                                 43998  6 +     59329 T-----T----T-T--------T----T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269922  6 +    668171 T-----T----T-T--------T----G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  181  2 +      1732 T-----G---------------------
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1710  6 +     17132 T-----T----T-T--------T----T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321210  6 +  24302211 T-----T----T-T--------T----T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356042  6 -    752769 T-----T----T-T--------T----T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21230  6 -     27822 T-----T----T-T--------T----T
i Miopithecus_ogouensis.k141_1534655                     I 8 C 0
s Nasalis_larvatus.k141_1350636                              27888  5 +     34575 T-----T----T-T--------T-----
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           52621  6 -    132029 G-----T----T-T--------T----G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8716  6 -     16345 G-----T----T-T--------T----G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14601  6 +     22201 G-----T----T-T--------T----G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412822  6 -  22158432 G-----T----T-T--------T----G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  24999  6 -     54323 G-----T----T-T--------T----G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_troglodytes.CM009242.2                               1471717  6 - 189151597 g-----t----t-t--------t----g
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   242050  6 - 183742232 t-----g----t-t--------t----t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8514  6 +     21308 T-----G----T-T--------T----T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291086  6 -  20919399 T-----G----T-T--------T----T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21169  6 -     27687 T-----G----T-T--------T----T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14305  7 +     16796 T-----G----TTT--------T----T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21115  6 -     23640 T-----G----T-T--------T----T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Piliocolobus_badius.k141_2704958                            1336  6 +     55023 T-----T----T-T--------T----T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          887  6 -     89929 T-----T----T-T--------T----T
i Piliocolobus_gordonorum.k141_381342                    C 0 I 2
s Piliocolobus_kirkii.k141_1310104                            1475  6 +     40849 T-----T----T-T--------T----T
i Piliocolobus_kirkii.k141_1310104                       C 0 I 3
s Piliocolobus_tephrosceles.PDMG02000141.1                  253142  6 +  14605196 t-----t----t-t--------t----t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                   176841  6 - 189387572 g-----t----t-t--------t----g
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191658  6 -   9816681 G-----T----T-T--------T----G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26470  6 +     69807 T-----T----T-T--------T----T
i Presbytis_comata.k141_1230337                          I 2 C 0
s Presbytis_mitrata.k141_584736                              43666  6 -     80239 T-----T----T-T--------T----T
i Presbytis_mitrata.k141_584736                          I 2 C 0
s Pygathrix_cinerea.k141_1153803                             25842  8 +     91421 T-T-T-T----T-T--------T----T
i Pygathrix_cinerea.k141_1153803                         I 1 C 0
s Pygathrix_nigripes_b.ctg100                                  152335  8 -   7812017 T-T-T-T----T-T--------T----T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6712  8 +     72585 T-T-T-T----T-T--------T----T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                              417  5 +      7119 -----------T-TT-------T----T
i Rhinopithecus_bieti.k119_778604                        I 1 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121027  4 + 195417433 -----------t-t--------t----t
i Rhinopithecus_roxellana.NC_044550.1                    I 1 C 0
s Rhinopithecus_strykeri.ctg102                             235268  4 -   7961872 -----------T-T--------T----T
i Rhinopithecus_strykeri.ctg102                          I 1 C 0
s Semnopithecus_entellus.k141_158471                         24159 10 +     27374 T-----T----T-T--------TTTTTT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27677  6 +     58920 T-----T----T-T--------T----T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14173  6 -     45317 T-----T----T-T--------T----T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21832  6 -     42441 T-----T----T-T--------T----T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24512  6 -     29113 T-----T----G-T--------T----T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27581  6 -     48123 T-----T----T-T--------T----T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390083  6 +   1523678 G-----T----T-T--------T----G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                           352038  2 - 186847797 t-----t---------------------
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19714  6 +     26378 T-----T----T-T--------T----T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32387  6 -     78344 T-----T----T-T--------T----T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19039  6 +     25722 T-----T----T-T--------T----T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27338  6 -     62838 T-----T----T-T--------T----T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27385  6 +     46913 T-----T----T-T--------T----T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8192  8 -     28527 T-----T----T-T--------TTT--T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29277  6 -     64340 T-----T----T-T--------T----T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27314  6 -     63452 T-----T----T-T--------T----T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8757  6 +     22490 T-----T----T-T--------T----T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2185  6 -      6147 T-----T----T-T--------T----T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9089  6 -     13050 T-----T----T-T--------T----T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254329  6 -   6242583 T-----T----T-T--------T----T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         353  6 +     19340 T-----T----T-T--------T----T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
e Capromys_pilorides.CapPil_scaffold_108409                   6893  0 +      8835 C
e Chinchilla_lanigera.JH722012.1                           1237445  0 -   2543920 C
e Nannospalax_galili.KL204047.1                             944932  0 +   3037898 C
e Saimiri_ustus.k141_360372                                  29138  0 -     47109 C
e Saimiri_sciureus.k141_1467173                              13993  0 -     22428 C
e Saimiri_oerstedii.k141_245838                              26586  0 -     34454 C
e Saimiri_macrodon.k141_1173117                              29895  0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       29506  0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1107945  0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            26668  0 +     75252 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23236  0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     30926  0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_89005         546  4 +      9367 I
e Octodon_degus.JH651603.1                                11053101  0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70352  0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1926083  0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                  8934  0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   4125  5 -     10735 I
e Dipodomys_ordii.KN672350.1                              18949178  5 -  37912305 I
e Dinomys_branickii.DinBra_scaffold_10381                    97480  0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   2911  0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  16433  0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       61508  0 -     66877 C
e Cavia_porcellus.DS562891.1                               4998407  0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4994965  0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    44258  0 +    145209 C
e Echinops_telfairi.JH980293.1                            62853189  0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_171931              12492  0 -     14239 C
e Elephantulus_edwardii.JH947257.1                         9107392  0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11863558  0 -  20541912 C
e Callibella_humilis.k141_1233062                             9068  4 +     18648 I
e Perodicticus_potto.k141_1854441                            17191  0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          24823  0 +     31479 C
e Otolemur_garnettii.GL873799.1                             351546  0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        38543  0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563382  0 - 199412804 C
e Nycticebus_coucang.k141_3846325                             1901  0 -      3937 C
e Nycticebus_bengalensis.LG01                             93635143  0 + 196305487 C
e Loris_tardigradus.ctg83                                  5042808  0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            9147  0 +     19643 C
e Galagoides_demidoff.k141_561628                            18986  0 -     32986 C
e Galago_senegalensis.k141_991736                             6935  0 +     22493 C
e Galago_moholi.ctg3793                                     123390  0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            604569  0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_70559                 12993  0 +     15858 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   18711  0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2109020  0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            11677  0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     16719  0 +     24238 C
e Carollia_perspicillata.CarPer_scaffold_170178               4109  0 +      5315 C
e Tupaia_tana.TupTan_flattened_line_394                       7055  2 -     70247 I
e Tupaia_chinensis.KB320699.1                              1832735  2 -   4065304 I
e Zalophus_californianus.ZalCal_flattened_line_17732         27790  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                103889  0 -    112863 C
e Ursus_maritimus.KK499267.1                                180750  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              5571  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3582 13 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        38167  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1450592  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                197121  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11467996  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14354015 13 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         7401  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             24868 227 -     74585 I
e Lycaon_pictus.CM007581.1                                41613528  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        812393  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24914979 13 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45105954  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41614373  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          221238  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     7895  0 -     23171 C
e CanFam4.chr16                                           42504259  0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  3816  0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            214554  0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20414244  0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_230229                      2267  0 +      2695 C
e Xerus_inauris.XerIna_scaffold_2302                        172993  0 -    224448 C
e Vicugna_pacos.KN270157.1                                   75229  0 +   5488506 C
e Varecia_variegata.k141_289850                              23050  0 -    147434 C
e Varecia_rubra.k141_787544                                  24143  0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    1353  0 -     21056 C
e Tursiops_truncatus.MRVK01000835.1                       17360156  6 -  33153633 I
e Trichechus_manatus.JH594705.1                            6479336  0 -  10818551 C
e Tragulus_javanicus.TraJav_scaffold_3462                   172225  0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    478567  0 -    610378 C
e Tarsius_wallacei.k141_226975                                5841  0 +     20590 C
e Tarsius_lariang.k141_1780720                                5790  0 +      6850 C
e Tapirus_terrestris.TapTer_scaffold_755                    104449  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      190497  0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                1587  0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                12521  0 +     22964 C
e Sus_scrofa.CM000828.4                                    6640027  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             123815  0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1867215  0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1857212  0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    48091  0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    114896  0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           6788  0 +     21866 C
e Sapajus_apella.ctg103                                     237198  0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6609  0 +     16473 C
e Saguinus_oedipus.k141_1466288                               3533  4 -      4301 I
e Saguinus_mystax.k141_8077960                                2778  0 +      5979 C
e Saguinus_midas.LG03                                       390600  3 - 209938924 I
e Saguinus_labiatus.k141_2380921                              1162  5 -      4390 I
e Saguinus_inustus.k141_2469308                               2829  0 +      5932 C
e Saguinus_imperator.k141_1898058                             2898  5 +      5971 I
e Saguinus_geoffroyi.k141_3779887                             2810  3 +      6077 I
e Saguinus_bicolor.k141_1429097                               2915  3 +     27962 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73712  0 -    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                       2913681  0 +   3329780 C
e Rattus_norvegicus.chr16                                 37021381  0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51956  0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18097978  0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3536299  0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5839790  0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            50541  0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            35482  0 +     52041 C
e Propithecus_verreauxi.k141_1047036                          7168  0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       93531  0 -     98465 C
e Propithecus_perrieri.k141_1496898                          33260  0 +     46564 C
e Propithecus_edwardsi.k141_635656                            6935  0 -     30655 C
e Propithecus_diadema.k141_153680                             3199  0 -     11706 C
e Propithecus_coronatus.k141_209299                           2602  0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1564966  0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1981499  0 +   4620579 C
e Plecturocebus_moloch.k141_1031110                          42938  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          41470  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      13554  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          6618  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          41573  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          6620  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     41922  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       41528  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          2125  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        7040  0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3359  0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           30634  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              555619  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           30650  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         30889  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               30613  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          4872  0 -     25401 C
e Pithecia_albicans.k141_1239476                             63778  0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             2135  0 +     22231 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11275  0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         245683  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13977  0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614459  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3971384  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18460664  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   23338  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       3536  0 +     17875 C
e Ovis_aries.CM001607.2                                   26403017  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107102555  0 - 174332312 C
e Orcinus_orca.KB316932.1                                  8095417  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    2462  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    91603  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          13027  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         435035  0 -    630418 C
e Ochotona_princeps.JH802162.1                             2550083  0 -   3988456 C
e Noctilio_leporinus.NocLep_scaffold_7894                   126446  0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226147  0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118471  0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_66571                          592  0 +     18357 C
e Myotis_lucifugus.GL429869.1                               381762  0 +   4330536 C
e Myotis_davidii.KB100139.1                                4385943  0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9791583  0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             81643  0 -     86153 C
e Mus_spretus.CM004101.1                                  39495456  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58216023  0 +  89631738 C
e Mus_musculus.chr8                                       41686136  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35591778  0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          37534  0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   17408  0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  23192  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 177659  0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   351978  0 +    437263 C
e Mirza_zaza.k141_766280                                     51272  0 -     62432 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             40497  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6361596  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15961244  0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                183499  0 +    200668 C
e Microcebus_murinus.CM007674.1                           74983483  0 +  93316391 C
e Mico_schneideri.k141_1877700                                     17994  4 -     26561 I
e Mico_humeralifer.k141_1180625                               9680  4 -     12984 I
e Mico_argentatus.k141_582562                                 9178  4 +     17804 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     80088  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17428108  0 +  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 47909  0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       149265  0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7499857  0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             219706  0 +    317179 C
e Manis_javanica.JSZB01003497.1                             672419  0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                222105  0 -    270270 C
e Macaca_maura.k141_1103459                                  44957  3 +     51645 I
e Loxodonta_africana.GL010049.1                           39079876  0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333542  0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       7879  0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          7879  0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              7869  0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          7873  0 +     29618 C
e Leontopithecus_rosalia.k141_349454                         10386  4 -     12945 I
e Leontopithecus_chrysomelas.k141_1327670                     9005  4 -     11567 I
e Leontocebus_nigricollis.k141_3905062                        2637  5 -      5717 I
e Leontocebus_illigeri.k141_2951200                           2807  5 +      5940 I
e Leontocebus_fuscicollis.k141_2994775                        3053  5 -     13097 I
e Lemur_catta.scaffold_24                                 14758344  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    61052  0 -     65777 C
e Lagothrix_lagothricha.k141_246028                          42144  0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64505  6 -     97402 I
e Jaculus_jaculus.JH725527.1                               1238019  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                2022  0 -     16823 C
e Indri_indri.k141_2415743                                    1205  0 +     11955 C
e Ictidomys_tridecemlineatus.JH393364.1                     385636  0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       3030  0 -    135385 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  68574  0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_23202               49664  0 +     49977 C
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6498  0 -     36432 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7897  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                29655  0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         15695  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          8695  0 -     42923 C
e Hapalemur_griseus.k141_763500                              59822  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             34953  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          13551  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_10447                     560  0 -     78134 C
e Glis_glis.GliGli_scaffold_33859                            33063  0 -     36801 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90143  0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_74466               17942  0 +     18121 C
e Felis_nigripes.FelNig_flattened_line_31944                 26517  0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185115415  0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              57868  0 -    111500 C
e Eulemur_rufus.k141_514691                                  41464  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            3742  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 47017  0 -     97555 C
e Eulemur_macaco.k141_1562045                                22824  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 52191  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             41869  0 +     68309 C
e Eulemur_coronatus.k141_384460                              85296  0 +    112731 C
e Eulemur_collaris.k141_601111                               41334  0 -     70999 C
e Eulemur_albifrons.k141_51491                               13625  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             4002  0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           63785  0 -    133382 C
e Equus_przewalskii.KK951119.1                              410751  0 -    498745 C
e Equus_caballus.CM000403.2                               21373965  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041  0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12577186  0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           11807  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          29832  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       238464  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               5140  0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  138122  0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  663336  0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18624235  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        291453  0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    643801  0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              3178  0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213113557  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 41109  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          1682  4 -      8242 I
e Condylura_cristata.JH655891.1                           35806106  0 +  53390261 C
e Chiropotes_sagulatus.k141_1113111                           6988  0 +     34062 C
e Chiropotes_israelita.k141_313004                           41416  0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           2922  0 +      5346 C
e Cheracebus_torquatus.k141_890198                           18333  0 +     39636 C
e Cheracebus_regulus.k141_471822                             18540  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             18285  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             7872  0 -     32913 C
e Cheirogaleus_medius.k141_759766                             4018  0 -     15404 C
e Cheirogaleus_major.k141_666340                             29501  0 -     33796 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17878  0 +     27315 C
e Cephalopachus_bancanus.k141_1689090                         1095  0 -      5494 C
e Cebus_unicolor.k141_1654760                                65965  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                6870  0 -     34880 C
e Cebus_albifrons.Contig27                                  369981  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               42043  4 +     53515 I
e Cebuella_niveiventris.k141_592277                           3988  4 -     12580 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75567  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Carlito_syrichta.NW_007259797.1                           269164  0 +    496798 C
e Capra_hircus.CM004588.1                                 26590063  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27407790  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1207841  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664181  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7629895  0 +  17673402 C
e Callithrix_kuhlii.k119_102356                                591  4 +      8664 I
e Callithrix_jacchus.pat_scaffold_3                      165453068  4 + 189096842 I
e Callithrix_geoffroyi.k119_459277                             675  4 -      8861 I
e Callimico_goeldii.k141_1609886                              8606  4 -     13885 I
e Cacajao_melanocephalus.k141_619699                         19521  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  19608  0 +     95584 C
e Cacajao_calvus.k141_89051                                  42082  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   6788  0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528724  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27543700  0 -  45695690 C
e Bos_mutus.JH880303.1                                      753561  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20354993  0 +  48749331 C
e Bison_bison.KN261452.1                                     20606  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     85073  0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         3115  0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7955906  0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               5088  0 -     19611 C
e Avahi_laniger.k141_2756659                                  5082  0 +     11645 C
e Ateles_paniscus.k141_866194                                21887  0 -     33135 C
e Ateles_marginatus.k141_970259                              47828  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              32457  0 +     44353 C
e Ateles_chamek.k141_615173                                   4903  0 -     28759 C
e Ateles_belzebuth.k141_1572163                               9767  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               273600  0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      14875  0 -     32367 C
e Aotus_vociferans.k141_944972                                8126  0 +      8415 C
e Aotus_trivirgatus.k141_192090                              22990  0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                671348  0 +   5030052 C
e Aotus_griseimembra.k141_982342                             43335  0 +     43593 C
e Aotus_azarae.k141_118258                                   49582  0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49177  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      175528  0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1584078  0 +   2318259 C
e Alouatta_seniculus.k141_928287                             31850  0 +     42133 C
e Alouatta_puruensis.k141_251022                              7714  0 +     30854 C
e Alouatta_palliata.k141_638677                              45537  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             39892  0 +     45454 C
e Alouatta_macconnelli.k141_361275                           22906  0 -     24835 C
e Alouatta_juara.k141_1687208                                41267  0 -     64179 C
e Alouatta_discolor.k141_2561099                             42816  0 +     55831 C
e Alouatta_caraya.k141_1109140                               43377  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             71138  0 -     84148 C
e Allactaga_bullata.AllBul_scaffold_20030                    16835  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     18796  0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           811717  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4370 2 +     36723 T-----T
s Acinonyx_jubatus.LLWD01001279.1                           811717 2 +   1699592 T-----G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 8
s Acomys_cahirinus.AcoCah_scaffold_21377                     18796 2 +     63021 T-----A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 6
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414244 2 +  29979442 T-----G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 8
s Ailurus_fulgens.LNAC01001112.1                            214554 2 +    347723 t-----g
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 8
s Allactaga_bullata.AllBul_scaffold_20030                    16835 2 -     61208 T-----A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 4
s Allenopithecus_nigroviridis.k141_3755588                   46695 2 +     53615 T-----T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42644 2 +     44087 T-----T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15281 2 -     21945 T-----T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16954 2 +     32033 T-----T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71138 2 -     84148 T-----T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43377 2 -     78289 T-----T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42816 2 +     55831 T-----T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41267 2 -     64179 T-----T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22906 2 -     24835 T-----T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39892 2 +     45454 T-----T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45537 2 +     70886 T-----T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7714 2 +     30854 T-----T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31850 2 +     42133 T-----T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584078 2 +   2318259 g-----a
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_1412                      175528 2 -    412891 T-----A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 8
s Antilocapra_americana.AntAmePen_scaffold_21030             49177 2 -     68529 T-----A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 4
s Aplodontia_rufa.AprRuf_scaffold_46868                      14875 1 -     32367 T------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3816 2 -     15198 T-----A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 8
s Ateles_geoffroyi_b.tarseq_1536                               273600 2 +  21539123 T-----T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9767 2 +     48076 T-----T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4903 2 -     28759 T-----T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32457 2 +     44353 T-----T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47828 2 -     71267 T-----T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21887 2 -     33135 T-----T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5082 2 +     11645 T-----A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5088 2 -     19611 T-----A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955906 2 -  23207421 T-----A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 8
s Balaenoptera_bonaerensis.DF507193.1                         3115 2 -      4711 T-----A
i Balaenoptera_bonaerensis.DF507193.1                    C 0 I 8
s Beatragus_hunteri.BeaHun_scaffold_7278                     85073 2 +    124022 G-----A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 4
s Bison_bison.KN261452.1                                     20606 2 +    288883 T-----A
i Bison_bison.KN261452.1                                 C 0 I 4
s Bos_indicus.CM003047.1                                  20354993 2 +  48749331 T-----A
i Bos_indicus.CM003047.1                                 C 0 I 4
s Bos_mutus.JH880303.1                                      753561 2 +   1948126 T-----A
i Bos_mutus.JH880303.1                                   C 0 I 4
s Bos_taurus.CM000203.6                                   27543700 2 -  45695690 T-----A
i Bos_taurus.CM000203.6                                  C 0 I 4
s Bubalus_bubalis.KI419123.1                               1528724 2 -   4408762 T-----A
i Bubalus_bubalis.KI419123.1                             C 0 I 4
s Cacajao_ayresi.k141_96119                                   6788 2 +     28062 T-----T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42082 2 -     91139 T-----T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19608 2 +     95584 T-----T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19521 2 +    119600 T-----T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9072 2 +     18648 T-----T
i Callibella_humilis.k141_1233062                        I 4 I 2
s Callimico_goeldii.k141_1609886                              8610 2 -     13885 T-----T
i Callimico_goeldii.k141_1609886                         I 4 I 3
s Callithrix_geoffroyi.k119_459277                             679 2 -      8861 T-----T
i Callithrix_geoffroyi.k119_459277                       I 4 I 2
s Callithrix_jacchus.pat_scaffold_3                      165453072 2 + 189096842 T-----T
i Callithrix_jacchus.pat_scaffold_3                      I 4 I 2
s Callithrix_kuhlii.k119_102356                                595 2 +      8664 T-----T
i Callithrix_kuhlii.k119_102356                          I 4 I 1
s Camelus_bactrianus.KN276810.1                            7629895 2 +  17673402 a-----a
i Camelus_bactrianus.KN276810.1                          C 0 I 7
s Camelus_dromedarius.KN272107.1                           4664181 2 +   7040546 a-----a
i Camelus_dromedarius.KN272107.1                         C 0 I 7
s Camelus_ferus.KB017975.1                                 1207841 2 +   1652518 a-----a
i Camelus_ferus.KB017975.1                               C 0 I 7
s CanFam4.chr16                                           42504259 2 +  60362399 T-----G
i CanFam4.chr16                                          C 0 I 8
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7895 2 -     23171 T-----G
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 8
s Canis_lupus_dingo.QKWQ01000480.1                          221238 2 +   9314153 T-----G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 8
s Canis_lupus_familiaris.chr16                            41614373 2 +  59632846 T-----G
i Canis_lupus_familiaris.chr16                           C 0 I 8
s Canis_lupus_orion.HG994398.1                            45105954 2 -  63665305 T-----G
i Canis_lupus_orion.HG994398.1                           C 0 I 8
s Capra_aegagrus.CM003241.1                               27407790 2 -  46296322 g-----a
i Capra_aegagrus.CM003241.1                              C 0 I 4
s Capra_hircus.CM004588.1                                 26590063 2 +  44709034 G-----A
i Capra_hircus.CM004588.1                                C 0 I 4
s Capromys_pilorides.CapPil_scaffold_108409                   6893 2 +      8835 T-----G
i Capromys_pilorides.CapPil_scaffold_108409              C 0 I 4
s Carlito_syrichta.NW_007259797.1                           269164 2 +    496798 t-----a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               4109 2 +      5315 T-----A
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 8
s Catagonus_wagneri.CatWag_scaffold_2839                     75567 4 -    217609 tta---a
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 2698
s Cavia_aperea.AVPZ01000300.1                              4994965 2 +  23392119 T-----G
i Cavia_aperea.AVPZ01000300.1                            C 0 I 4
s Cavia_porcellus.DS562891.1                               4998407 2 +  23407841 T-----G
i Cavia_porcellus.DS562891.1                             C 0 I 4
s Cavia_tschudii.CavTsc_scaffold_23560                       61508 2 -     66877 T-----G
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 4
s Cebuella_niveiventris.k141_592277                           3992 2 -     12580 T-----T
i Cebuella_niveiventris.k141_592277                      I 4 I 1
s Cebuella_pygmaea.k141_145798                               42047 2 +     53515 T-----T
i Cebuella_pygmaea.k141_145798                           I 4 I 2
s Cebus_albifrons.Contig27                                  369981 2 -  26074798 T-----T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6870 2 -     34880 T-----T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65965 2 -     89041 T-----T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1095 2 -      5494 T-----A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491045 2 -  27778364 T-----G
i Ceratotherium_simum.JH767749.1                         C 0 I 8
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17878 2 +     27315 T-----G
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 8
s Cercocebus_atys.KQ010504.1                                139871 7 -   4669795 ttatttt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43612 6 +     47900 T-TTGTT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43446 1 -     44860 ------T
i Cercocebus_lunulatus.k141_2779015                      I 2 C 0
s Cercocebus_torquatus.k141_2159127                          43427 6 -    148725 T-TTTTT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25650 2 -     40656 T-----T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5619 2 +     20796 T-----T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10690 2 -     17524 T-----T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26415 2 -     34525 T-----T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10240 2 -     25376 T-----T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362836 2 -  39242232 T-----T
i Cercopithecus_albogularis.ctg5                               I 1 C 0
s Cercopithecus_mona.ctg39                                  268547 2 +  21565898 T-----T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25824 2 -     32606 T-----T
i Cercopithecus_nictitans.k141_2995370                   I 1 C 0
s Cercopithecus_petaurista.k141_42573                         1980 2 +      8499 T-----T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21304 2 +     36323 T-----T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11677 2 -     19938 T-----A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 4
s Cheirogaleus_major.k141_666340                             29501 2 -     33796 T-----A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4018 2 -     15404 T-----A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7872 2 -     32913 T-----T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18285 2 -     40346 T-----T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18540 2 +    216457 T-----T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18333 2 +     39636 T-----T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237445 2 -   2543920 T-----G
i Chinchilla_lanigera.JH722012.1                         C 0 I 4
s Chiropotes_albinasus.k141_1946120                           2922 1 +      5346 ------T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41416 2 -    112038 T-----T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6988 2 +     34062 T-----T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342197 2 +  18827391 T-----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8744 2 -     44032 T-----T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303522 2 - 135778131 t-----t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 12993 2 +     15858 T-----A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 4
s Choloepus_hoffmanni.KN194906.1                            604569 2 -    839153 t-----a
i Choloepus_hoffmanni.KN194906.1                         C 0 I 4
s Colobus_angolensis.KN981557.1                             407970 2 -   2368649 t-----t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377845 2 - 200372422 T-----T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1394 2 -     84244 T-----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806106 2 +  53390261 T-----A
i Condylura_cristata.JH655891.1                          C 0 I 4
s Cricetomys_gambianus.CriGam_scaffold_14425                 41109 2 -     83289 T-----A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 6
s Cricetulus_griseus.LT883664.1                          213113557 2 - 224834208 c-----a
i Cricetulus_griseus.LT883664.1                          C 0 I 6
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3178 2 +     87169 T-----G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 8
s Ctenodactylus_gundi.CteGun_scaffold_65                    643801 2 -   1526836 C-----G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 4
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16433 2 +     50838 T-----T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 4
s Cuniculus_paca.CunPac_flattened_line_7025                   2911 2 +     36344 T-----G
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 4
s Dasyprocta_punctata.DasPun_flattened_line_15900            26668 2 +     75252 T-----G
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 4
s Dasypus_novemcinctus.JH564415.1                          2109020 2 -   2246927 t-----a
i Dasypus_novemcinctus.JH564415.1                        C 0 I 4
s Daubentonia_madagascariensis.ctg71                        291453 2 +  12879189 T-----A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624235 2 -  35494412 T-----A
i Delphinapterus_leucas.KZ290073.1                       C 0 I 8
s Desmodus_rotundus.KZ672289.1                            11863558 2 -  20541912 T-----G
i Desmodus_rotundus.KZ672289.1                           C 0 I 8
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663336 2 -   1390856 T-----G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 8
s Diceros_bicornis.DicBicMic_scaffold_5955                  138122 2 -    198055 T-----G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 8
s Dinomys_branickii.DinBra_scaffold_10381                    97480 2 -    115145 T-----G
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 4
s Dolichotis_patagonum.DolPat_scaffold_80628                  8934 2 +     14636 T-----G
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 4
s Echinops_telfairi.JH980293.1                            62853189 2 - 111700974 t-----a
i Echinops_telfairi.JH980293.1                           C 0 I 4
s Eidolon_helvum.AWHC01266696.1                               5140 2 +     19438 t-----a
i Eidolon_helvum.AWHC01266696.1                          C 0 I 7
s Elaphurus_davidianus.JRFZ01104969.1                       238464 2 -    607251 T-----A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 4
s Elephantulus_edwardii.JH947257.1                         9107392 2 -  10337057 t-----a
i Elephantulus_edwardii.JH947257.1                       C 0 I 4
s Ellobius_lutescens.LOEQ01008920.1                          29832 2 +    110024 t-----g
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 6
s Ellobius_talpinus.LOJH01026522.1                           11807 2 +     18970 t-----g
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 6
s Eptesicus_fuscus.JH977646.1                             12577186 2 +  14770903 T-----A
i Eptesicus_fuscus.JH977646.1                            C 0 I 8
s Erythrocebus_patas.Contig38                               261725 2 +  21539334 T-----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63785 2 -    133382 T-----A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 8
s Eubalaena_japonica.EubJap_flattened_line_118172             4002 2 +      7672 T-----G
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 I 8
s Eulemur_albifrons.k141_51491                               13625 3 -     24895 T----AA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41334 2 -     70999 T-----A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85296 2 +    112731 T-----A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41869 2 +     68309 T-----A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52191 2 -     65740 T-----A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22824 2 -     75513 T-----A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47017 3 -     97555 T----AA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3742 3 +     30972 T----AA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41464 2 -     52037 T-----A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57868 2 -    111500 T-----A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245630 2 - 206538554 T-----G
i Felis_catus.CM001381.2                                 C 0 I 8
s Felis_catus_fca126.CM031415.1                          185115415 2 - 205367284 T-----G
i Felis_catus_fca126.CM031415.1                          C 0 I 8
s Felis_nigripes.FelNig_flattened_line_31944                 26517 2 -     30238 T-----G
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 8
s Galago_moholi.ctg3793                                     123390 2 -    137831 T-----A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6935 2 +     22493 T-----A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18986 2 -     32986 T-----A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17942 2 +     18121 T-----A
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 I 4
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90143 2 -     95226 T-----A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 4
s Glis_glis.GliGli_scaffold_33859                            33063 2 -     36801 T-----A
i Glis_glis.GliGli_scaffold_33859                        C 0 I 4
s Gorilla_beringei.k141_3358147                               4688 2 -      8343 T-----T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253699 2 - 186649187 t-----t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     560 2 -     78134 T-----A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 4
s Hapalemur_alaotrensis.k141_330369                          13551 2 -     40692 T-----A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34953 2 +     49394 T-----A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59822 2 -     66874 T-----A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8695 2 -     42923 T-----A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15695 2 -     53142 T-----A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29655 2 -    327341 T-----G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 8
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7897 2 +     48891 G-----A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 4
s Heterocephalus_glaber.JH602082.1                         1926083 2 -  22651954 t-----g
i Heterocephalus_glaber.JH602082.1                       C 0 I 4
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6498 2 -     36432 T-----A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 8
s Hipposideros_galeritus.HipGal_scaffold_23202               49664 5 +     49977 T--TTGT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 7
s Hoolock_leuconedys.ctg274                                    141705 1 -    630532 T------
i Hoolock_leuconedys.ctg274                                 C 0 I 1
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68574 2 +     83186 G-----G
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 8
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70352 2 +    143317 T-----G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 4
s Hylobates_agilis.k141_1155965                               4735 2 +     12352 T-----T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11919 2 +     55766 T-----T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051517 2 + 191637585 T-----T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800395 2 +  11177569 T-----T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3030 2 -    135385 T-----G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 4
s Ictidomys_tridecemlineatus.JH393364.1                     385636 2 +   7955117 t-----A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 4
s Indri_indri.k141_2415743                                    1205 2 +     11955 T-----A
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2022 2 -     16823 T-----A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 8
s Jaculus_jaculus.JH725527.1                               1238019 2 +   9596543 T-----A
i Jaculus_jaculus.JH725527.1                             C 0 I 4
s Lagothrix_lagothricha.k141_246028                          42144 2 +    110728 T-----T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61052 2 -     65777 T-----A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 8
s Lemur_catta.scaffold_24                                 14758344 2 +  30322482 T-----A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3058 2 -     13097 T-----T
i Leontocebus_fuscicollis.k141_2994775                   I 5 C 0
s Leontocebus_illigeri.k141_2951200                           2812 2 +      5940 T-----T
i Leontocebus_illigeri.k141_2951200                      I 5 C 0
s Leontocebus_nigricollis.k141_3905062                        2642 2 -      5717 T-----T
i Leontocebus_nigricollis.k141_3905062                   I 5 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9009 2 -     11567 T-----T
i Leontopithecus_chrysomelas.k141_1327670                I 4 C 0
s Leontopithecus_rosalia.k141_349454                         10390 2 -     12945 T-----T
i Leontopithecus_rosalia.k141_349454                     I 4 C 0
s Lepilemur_ankaranensis.k141_567626                          7873 2 +     29618 T-----A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7869 2 +     31569 T-----A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7879 2 +     24756 T-----A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7879 2 +     16388 T-----A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812393 2 -   3914936 t-----g
i Leptonychotes_weddellii.KB714746.1                     C 0 I 8
s Lepus_americanus.LepAme_scaffold_56121                     16719 2 +     24238 T-----A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 4
s Lipotes_vexillifer.KE559953.1                             333542 2 +    662738 T-----A
i Lipotes_vexillifer.KE559953.1                          C 0 I 8
s Lophocebus_aterrimus.ctg367                               331829 2 -   1826925 T-----T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9147 2 +     19643 T-----A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042808 2 -   6120653 T-----A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079876 2 +  43346337 T-----G
i Loxodonta_africana.GL010049.1                          C 0 I 4
s Lycaon_pictus.CM007581.1                                41613528 2 +  59628241 T-----G
i Lycaon_pictus.CM007581.1                               C 0 I 8
s Macaca_arctoides.k141_1757516                              44146 1 -     61512 T------
i Macaca_arctoides.k141_1757516                          C 0 I 9
s Macaca_fascicularis.k141_1397292                           21162 2 -     24934 T-----T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_leonina.k141_321385                                 35198 2 -     50087 T-----T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398365 2 +  25927173 t-----t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47537 2 -     62418 T-----T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_3557992                                24185 2 +     24253 T-----T
i Macaca_radiata.k141_3557992                            I 22 C 0
s Macaca_siberu.k141_2185972                                 44004 2 +     59329 T-----T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269928 2 +    668171 T-----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_tonkeana.k141_339739                                 1716 1 +     17132 T------
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222105 2 -    270270 T-----A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 7
s Mandrillus_leucophaeus.scaffold280                        321216 6 +  24302211 T-TTGTT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356048 6 -    752769 T-TTGTT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672419 2 -    737560 t-----a
i Manis_javanica.JSZB01003497.1                          C 0 I 8
s Manis_pentadactyla.KN006162.1                             219706 2 +    317179 t-----a
i Manis_pentadactyla.KN006162.1                          C 0 I 8
s Marmota_marmota.CZRN01000018.1                           7499857 2 +  40650429 t-----a
i Marmota_marmota.CZRN01000018.1                         C 0 I 4
s Megaderma_lyra.MegLyr_scaffold_4542                       149265 2 +    207569 T-----A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 8
s Meriones_unguiculatus.MerUng_scaffold_7390                 47909 2 -    140813 T-----A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 6
s Mesocricetus_auratus.KB708134.1                         17428108 2 +  29670104 c-----A
i Mesocricetus_auratus.KB708134.1                        C 0 I 6
s Mesoplodon_bidens.MesBid_scaffold_6114                     80088 2 +     93471 T-----A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 8
s Mico_argentatus.k141_582562                                 9182 2 +     17804 T-----T
i Mico_argentatus.k141_582562                            I 4 I 2
s Mico_humeralifer.k141_1180625                               9684 2 -     12984 T-----T
i Mico_humeralifer.k141_1180625                          I 4 I 2
s Mico_schneideri.k141_1877700                                     17998 2 -     26561 T-----T
i Mico_schneideri.k141_1877700                                 I 4 I 2
s Microcebus_murinus.CM007674.1                           74983483 2 +  93316391 t-----a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44258 2 +    145209 t-----a
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 4
s Micronycteris_hirsuta.MicHir_scaffold_2233                183499 2 +    200668 T-----A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 8
s Microtus_ochrogaster.CM001695.1                         15961244 2 +  27267610 t-----g
i Microtus_ochrogaster.CM001695.1                        C 0 I 6
s Miniopterus_natalensis.LDJU01000034.1                    6361596 2 -   8254450 T-----A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 8
s Miniopterus_schreibersii.MinSch_scaffold_23309             40497 2 -     48117 T-----A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 8
s Miopithecus_ogouensis.k141_1534655                         21236 2 -     27822 T-----T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7401 2 +     27589 T-----G
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 8
s Mirza_zaza.k141_766280                                     51272 2 -     62432 T-----A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351978 2 +    437263 T-----A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 8
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177659 2 +    366855 T-----A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 8
s Moschus_moschiferus.MosMos_scaffold_13123                  23192 2 -     82753 T-----A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 4
s Mungos_mungo.MunMun_flattened_line_18455                   17408 2 -     63510 T-----G
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 8
s Murina_feae.MurFea_scaffold_17764                          37534 2 +     47283 T-----A
i Murina_feae.MurFea_scaffold_17764                      C 0 I 8
s Mus_caroli.LT608237.1                                   35591778 2 + 120012414 t-----c
i Mus_caroli.LT608237.1                                  C 0 I 6
s Mus_musculus.chr8                                       41686136 2 + 129401213 t-----c
i Mus_musculus.chr8                                      C 0 I 6
s Mus_pahari.LT608297.1                                   58216023 2 +  89631738 t-----c
i Mus_pahari.LT608297.1                                  C 0 I 6
s Mus_spretus.CM004101.1                                  39495456 2 + 130317789 t-----a
i Mus_spretus.CM004101.1                                 C 0 I 6
s Muscardinus_avellanarius.MusAve_scaffold_12866             81643 2 -     86153 T-----A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 4
s Myotis_brandtii.KE162005.1                               9791583 2 +  10118263 T-----A
i Myotis_brandtii.KE162005.1                             C 0 I 8
s Myotis_davidii.KB100139.1                                4385943 2 +   6019432 T-----A
i Myotis_davidii.KB100139.1                              C 0 I 8
s Myotis_lucifugus.GL429869.1                               381762 2 +   4330536 t-----A
i Myotis_lucifugus.GL429869.1                            C 0 I 8
s Myotis_myotis.MyoMyo_scaffold_66571                          592 2 +     18357 T-----A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 8
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118471 2 +    130748 T-----A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 4
s Nannospalax_galili.KL204047.1                             944932 2 +   3037898 T-----A
i Nannospalax_galili.KL204047.1                          C 0 I 5
s Nasalis_larvatus.k141_1350636                              27893 2 +     34575 T-----T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11467996 2 -  31847680 T-----G
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 8
s Neophocaena_asiaeorientalis.KZ687982.1                   1226147 2 -   7148211 T-----A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 8
s Noctilio_leporinus.NocLep_scaffold_7894                   126446 2 -    149072 T-----A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 8
s Nomascus_annamensis.k141_1771965                           52627 2 -    132029 T-----T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8722 2 -     16345 T-----T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14607 2 +     22201 T-----T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412828 2 -  22158432 T-----T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25005 2 -     54323 T-----T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197121 2 +   9404916 T-----G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 8
s Nycticebus_bengalensis.LG01                             93635143 2 + 196305487 T-----A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1901 2 -      3937 T-----A
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563382 2 - 199412804 T-----A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550083 2 -   3988456 t-----a
i Ochotona_princeps.JH802162.1                           C 0 I 4
s Octodon_degus.JH651603.1                                11053101 2 -  11899542 T-----G
i Octodon_degus.JH651603.1                               C 0 I 4
s Odobenus_rosmarus.KB229312.1                             1450592 2 +   2017862 T-----G
i Odobenus_rosmarus.KB229312.1                           C 0 I 8
s Odocoileus_virginianus.KZ100018.1                         435035 2 -    630418 T-----A
i Odocoileus_virginianus.KZ100018.1                      C 0 I 4
s Okapia_johnstoni.LVCL01S0005463.1                          13027 2 +    150152 T-----A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 4
s Ondatra_zibethicus.OndZib_scaffold_7387                    91603 2 -    140218 T-----G
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 6
s Onychomys_torridus.OnyTor_scaffold_28377                    2462 2 -     41509 T-----G
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 6
s Orcinus_orca.KB316932.1                                  8095417 2 +  10937097 T-----A
i Orcinus_orca.KB316932.1                                C 0 I 8
s Orycteropus_afer.OryAfe_flattened_line_171931              12492 2 -     14239 T-----A
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 4
s Oryctolagus_cuniculus.CM000791.1                       107102555 2 - 174332312 T-----A
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 4
s Otocyon_megalotis.JAEUCK010005147.1                        38167 2 +    559221 T-----G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 8
s Otolemur_crassicaudatus.k141_649260                        38543 2 -     51505 T-----A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351546 2 +   1103335 t-----a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403017 2 -  44047080 g-----a
i Ovis_aries.CM001607.2                                  C 0 I 4
s Ovis_canadensis.OviCan_scaffold_67953                       3536 2 +     17875 G-----A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 4
s Pan_troglodytes.CM009242.2                               1471723 2 - 189151597 t-----t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23338 2 -    230217 T-----G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 8
s Panthera_pardus.KV860321.1                              18460664 2 -  18783137 T-----G
i Panthera_pardus.KV860321.1                             C 0 I 8
s Panthera_tigris.KE722367.1                               3971384 2 +   8748460 T-----G
i Panthera_tigris.KE722367.1                             C 0 I 8
s Pantholops_hodgsonii.KE114653.1                          1614459 2 +   2937107 g-----a
i Pantholops_hodgsonii.KE114653.1                        C 0 I 4
s Papio_anubis.CM001495.2                                   242056 2 - 183742232 t-----t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8520 2 +     21308 T-----T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291092 2 -  20919399 T-----T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21175 2 -     27687 T-----T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14312 2 +     16796 T-----T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21121 2 -     23640 T-----T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13977 2 +     78924 T-----G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 8
s Perodicticus_ibeanus.k141_1921260                          24823 2 +     31479 T-----A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17191 2 -     24908 T-----A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245683 2 +  18517816 T-----g
i Peromyscus_maniculatus.KI615324.1                      C 0 I 6
s Petromus_typicus.PetTyp_scaffold_17301                     30926 2 -     56120 T-----G
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 4
s Phocoena_phocoena.PhoPho_flattened_line_46867              11275 2 -     15039 T-----A
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 I 8
s Piliocolobus_badius.k141_2704958                            1342 2 +     55023 T-----T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          895 2 -     89929 T-----T
i Piliocolobus_gordonorum.k141_381342                    I 2 C 0
s Piliocolobus_kirkii.k141_1310104                            1484 2 +     40849 T-----T
i Piliocolobus_kirkii.k141_1310104                       I 3 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253148 2 +  14605196 t-----t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2135 2 +     22231 T-----A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 8
s Pithecia_albicans.k141_1239476                             63778 2 +    207309 T-----T
i Pithecia_albicans.k141_1239476                         C 0 I 1
s Pithecia_chrysocephala.k141_785207                          4872 2 -     25401 T-----T
i Pithecia_chrysocephala.k141_785207                     C 0 I 1
s Pithecia_hirsuta.k141_640380                               30613 2 +     58159 T-----T
i Pithecia_hirsuta.k141_640380                           C 0 I 1
s Pithecia_mittermeieri.k141_1280039                         30889 2 +     63561 T-----T
i Pithecia_mittermeieri.k141_1280039                     C 0 I 1
s Pithecia_pissinattii.k141_878371                           30650 1 +     51148 ------T
i Pithecia_pissinattii.k141_878371                       C 0 I 1
s Pithecia_pithecia.tarseq_165                              555619 2 -   4542175 T-----T
i Pithecia_pithecia.tarseq_165                           C 0 I 1
s Pithecia_vanzolinii.k141_1369553                           30634 1 +     51125 ------T
i Pithecia_vanzolinii.k141_1369553                       C 0 I 1
s Platanista_gangetica.PlaMin_flattened_line_167872           3359 2 -      8168 T-----A
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 I 8
s Plecturocebus_bernhardi.k141_2549090                        7040 2 +     39866 T-----T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2125 2 -      9282 T-----T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41528 2 -     87950 T-----T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41922 2 -     88961 T-----T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6620 2 -     39403 T-----T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41573 2 +     87928 T-----T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6618 2 -     60166 T-----T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13554 2 -     67232 T-----T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41470 2 -     90634 T-----T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42938 2 +     89403 T-----T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176847 2 - 189387572 t-----t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191664 2 -   9816681 T-----T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26476 2 +     69807 T-----T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43672 2 -     80239 T-----T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981499 2 +   4620579 t-----a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564966 2 -   2598838 T-----A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2602 2 -      7103 T-----A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3199 2 -     11706 T-----A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6935 2 -     30655 T-----A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33260 2 +     46564 T-----A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93531 2 -     98465 T-----A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7168 2 +     35169 T-----A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            35482 2 +     52041 t-----a
i Psammomys_obesus.NESX01036366.1                        C 0 I 6
s Pteronotus_parnellii.KE847780.1                            50541 2 -     66298 T-----A
i Pteronotus_parnellii.KE847780.1                        C 0 I 8
s Pteropus_alecto.KB030862.1                               5839790 2 -  28871421 t-----a
i Pteropus_alecto.KB030862.1                             C 0 I 7
s Pteropus_vampyrus.KN525825.1                             3536299 2 -   4952924 t-----a
i Pteropus_vampyrus.KN525825.1                           C 0 I 7
s Puma_concolor.QAVW01001104.1                            18097978 2 +  38429054 T-----G
i Puma_concolor.QAVW01001104.1                           C 0 I 8
s Pygathrix_cinerea.k141_1153803                             25850 2 +     91421 T-----T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152343 2 -   7812017 T-----T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6720 2 +     72585 T-----T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51956 2 +     55069 T-----A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 2
s Rattus_norvegicus.chr16                                 37021381 2 -  90668790 t-----a
i Rattus_norvegicus.chr16                                C 0 I 6
s Rhinolophus_sinicus.LVEH01000134.1                       2913681 5 +   3329780 tt-t-gt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 7
s Rhinopithecus_bieti.k119_778604                              422 2 +      7119 T-----T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121031 2 + 195417433 t-----t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235272 2 -   7961872 T-----T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73712 2 -    116970 T-----A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 7
s Saguinus_bicolor.k141_1429097                               2918 2 +     27962 A-----T
i Saguinus_bicolor.k141_1429097                          I 3 C 0
s Saguinus_geoffroyi.k141_3779887                             2813 2 +      6077 A-----T
i Saguinus_geoffroyi.k141_3779887                        I 3 C 0
s Saguinus_imperator.k141_1898058                             2903 2 +      5971 A-----T
i Saguinus_imperator.k141_1898058                        I 5 C 0
s Saguinus_labiatus.k141_2380921                              1167 3 -      4390 A----TT
i Saguinus_labiatus.k141_2380921                         I 5 C 0
s Saguinus_midas.LG03                                       390603 2 - 209938924 A-----T
i Saguinus_midas.LG03                                    I 3 C 0
s Saguinus_oedipus.k141_1466288                               3537 2 -      4301 T-----T
i Saguinus_oedipus.k141_1466288                          I 4 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6609 2 +     16473 T-----A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 4
s Saimiri_boliviensis.NW_024100920.1                       1107945 2 + 121099817 t-----t
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29506 2 -     47369 T-----T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29895 2 -     79414 T-----T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26586 2 -     34454 T-----T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13993 1 -     22428 T------
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29138 2 -     47109 T-----T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237198 2 +   5703754 T-----T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6788 2 +     21866 T-----T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114896 2 +    313613 T-----A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 4
s Semnopithecus_entellus.k141_158471                         24169 2 +     27374 T-----T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27683 2 +     58920 T-----T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14179 2 -     45317 T-----T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21838 2 -     42441 T-----T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24518 2 -     29113 T-----T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27587 2 -     48123 T-----T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48091 2 +     77746 T-----G
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 6
s Solenodon_paradoxus.SolPar_flattened_line_126            1857212 2 -   1910179 T-----A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 4
s Spermophilus_dauricus.KZ294078.1                         1867215 2 +   3870691 t-----a
i Spermophilus_dauricus.KZ294078.1                       C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_13525              5571 2 -     97271 T-----G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 8
s Suricata_suricatta.SurSur_flattened_line_6629             123815 2 +    196729 T-----G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 8
s Sus_scrofa.CM000828.4                                    6640027 4 +  69701581 tt---ca
i Sus_scrofa.CM000828.4                                  C 0 I 2928
s Symphalangus_syndactylus.tarseq_199                       390089 2 +   1523678 T-----T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12521 2 +     22964 T-----A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 8
s Tamandua_tetradactyla.TamTet_scaffold_224794                1587 2 +      5583 T-----A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 4
s Tapirus_indicus.TapInd_scaffold_7432                      190497 2 +    199430 T-----C
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 8
s Tapirus_terrestris.TapTer_scaffold_755                    104449 2 -    539355 T-----C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 8
s Tarsius_lariang.k141_1780720                                5790 2 +      6850 T-----A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5841 2 +     20590 T-----A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352040 2 - 186847797 t-----t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23236 2 -     33621 t-----a
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 4
s Tolypeutes_matacus.TolMat_scaffold_31955                   18711 2 -     31044 T-----A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 4
s Tonatia_saurophila.TonSau_scaffold_294                    478567 2 -    610378 T-----C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 8
s Trachypithecus_auratus.k141_1189070                        19720 2 +     26378 T-----T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32393 2 -     78344 T-----T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19045 2 +     25722 T-----T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27344 2 -     62838 T-----T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27391 2 +     46913 T-----T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8200 2 -     28527 T-----T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29283 2 -     64340 T-----T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27320 2 -     63452 T-----T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8763 2 +     22490 T-----T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2191 2 -      6147 T-----T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9095 2 -     13050 T-----T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254335 2 -   6242583 T-----T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         359 2 +     19340 T-----T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172225 2 -    200418 G-----A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 4
s Trichechus_manatus.JH594705.1                            6479336 2 -  10818551 t-----g
i Trichechus_manatus.JH594705.1                          C 0 I 4
s Uropsilus_gracilis.UroGra_scaffold_46687                    1353 2 -     21056 T-----A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 4
s Ursus_maritimus.KK499267.1                                180750 2 +   5085361 T-----G
i Ursus_maritimus.KK499267.1                             C 0 I 8
s Varecia_rubra.k141_787544                                  24143 2 -     30710 T-----A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23050 2 -    147434 T-----A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75229 2 +   5488506 a-----a
i Vicugna_pacos.KN270157.1                               C 0 I 7
s Vulpes_lagopus.VulLag_flattened_line_12041                103889 2 -    112863 T-----G
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 8
s Xerus_inauris.XerIna_scaffold_2302                        172993 2 -    224448 T-----A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_17732         27790 2 -     86975 T-----G
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 8
s Zapus_hudsonius.ZapHud_scaffold_230229                      2267 2 +      2695 T-----A
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 4
e Perognathus_longimembris.PerPac_flattened_line_89005         546 4 +      9367 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   4125 5 -     10735 I
e Dipodomys_ordii.KN672350.1                              18949178 5 -  37912305 I
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       7055 2 -     70247 I
e Tupaia_chinensis.KB320699.1                              1832735 2 -   4065304 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3582 13 -     18639 I
e Mustela_putorius.JH418006.1                             14354015 13 +  14710649 I
e Mellivora_capensis.MelCap_flattened_line_19308             24868 227 -     74585 I
e Enhydra_lutris.KZ291758.1                               24914979 13 +  41312741 I
e Tursiops_truncatus.MRVK01000835.1                       17360156 6 -  33153633 I
e Saguinus_mystax.k141_8077960                                2778 0 +      5979 C
e Saguinus_inustus.k141_2469308                               2829 0 +      5932 C
e Macaca_thibetana.k99_503078                                  183 0 +      1732 C
e Macaca_mulatta.NC_041758.1                                414137 0 - 187317192 C
e Macaca_maura.k141_1103459                                  44957 3 +     51645 I
e Macaca_fuscata.k119_546792                                 24007 7 +     30527 I
e Macaca_cyclopis.k119_263443                                24054 7 +     30207 I
e Macaca_assamensis.Contig5                                 371802 0 -  60120075 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64505 6 -     97402 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751 0 -    498745 C
e Equus_caballus.CM000403.2                               21373965 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041 0 -   4378816 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          1682 4 -      8242 I
e Cercopithecus_pogonias.k141_6079                           24379 0 +     70610 C
e Cercopithecus_neglectus.k141_858615                        30884 0 -     45857 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Aotus_vociferans.k141_944972                                8126 0 +      8415 C
e Aotus_trivirgatus.k141_192090                              22990 0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                671348 0 +   5030052 C
e Aotus_griseimembra.k141_982342                             43335 0 +     43593 C
e Aotus_azarae.k141_118258                                   49582 0 -     65372 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4372 3 +     36723 T-----TG
s Allenopithecus_nigroviridis.k141_3755588                   46697 2 +     53615 T-----T-
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42646 2 +     44087 T-----T-
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15283 2 -     21945 T-----T-
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16956 2 +     32033 T-----T-
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71140 2 -     84148 C-----T-
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43379 2 -     78289 T-----T-
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42818 2 +     55831 A-----T-
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41269 2 -     64179 T-----T-
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22908 2 -     24835 T-----T-
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39894 2 +     45454 T-----T-
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45539 2 +     70886 T-----T-
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7716 2 +     30854 T-----T-
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31852 2 +     42133 T-----T-
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273602 2 +  21539123 T-----T-
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9769 2 +     48076 T-----T-
i Ateles_belzebuth.k141_1572163                          C 0 I 1
s Ateles_chamek.k141_615173                                   4905 4 -     28759 TTT---T-
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32459 2 +     44353 T-----T-
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47830 2 -     71267 T-----T-
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21889 2 -     33135 T-----T-
i Ateles_paniscus.k141_866194                            C 0 C 0
s Cacajao_ayresi.k141_96119                                   6790 2 +     28062 T-----T-
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42084 2 -     91139 T-----T-
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19610 2 +     95584 T-----T-
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19523 2 +    119600 T-----T-
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9076 2 +     18648 T-----T-
i Callibella_humilis.k141_1233062                        I 2 C 0
s Callimico_goeldii.k141_1609886                              8615 2 -     13885 T-----T-
i Callimico_goeldii.k141_1609886                         I 3 C 0
s Callithrix_geoffroyi.k119_459277                             683 2 -      8861 T-----T-
i Callithrix_geoffroyi.k119_459277                       I 2 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453076 2 + 189096842 T-----T-
i Callithrix_jacchus.pat_scaffold_3                      I 2 C 0
s Callithrix_kuhlii.k119_102356                                598 2 +      8664 T-----T-
i Callithrix_kuhlii.k119_102356                          I 1 C 0
s Carlito_syrichta.NW_007259797.1                           269166 2 +    496798 t-----t-
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cebuella_niveiventris.k141_592277                           3995 1 -     12580 ------T-
i Cebuella_niveiventris.k141_592277                      I 1 C 0
s Cebuella_pygmaea.k141_145798                               42051 2 +     53515 T-----T-
i Cebuella_pygmaea.k141_145798                           I 2 C 0
s Cebus_albifrons.Contig27                                  369983 2 -  26074798 T-----T-
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6872 2 -     34880 T-----T-
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65967 2 -     89041 T-----T-
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1097 2 -      5494 T-----T-
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                139878 1 -   4669795 a-------
i Cercocebus_atys.KQ010504.1                             C 0 I 2
s Cercocebus_chrysogaster.k141_1522556                       43618 2 +     47900 T-----T-
i Cercocebus_chrysogaster.k141_1522556                   C 0 I 3
s Cercocebus_lunulatus.k141_2779015                          43447 1 -     44860 T-------
i Cercocebus_lunulatus.k141_2779015                      C 0 I 2
s Cercocebus_torquatus.k141_2159127                          43433 1 -    148725 T-------
i Cercocebus_torquatus.k141_2159127                      C 0 I 2
s Cercopithecus_ascanius.k141_3120866                        25652 2 -     40656 A-----A-
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5621 2 +     20796 T-----T-
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10692 2 -     17524 T-----T-
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26417 2 -     34525 T-----T-
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10242 2 -     25376 T-----T-
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362838 2 -  39242232 T-----T-
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268549 2 +  21565898 T-----T-
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30884 1 -     45857 ------T-
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25826 2 -     32606 T-----T-
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1982 2 +      8499 T-----T-
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24379 2 +     70610 T-----T-
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21306 2 +     36323 T-----T-
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7874 2 -     32913 C-----T-
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18287 2 -     40346 C-----T-
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18542 2 +    216457 C-----T-
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18335 2 +     39636 C-----T-
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2923 2 +      5346 T-----T-
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41418 2 -    112038 T-----T-
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6990 1 +     34062 ------T-
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342199 2 +  18827391 T-----T-
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8746 2 -     44032 T-----T-
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303524 2 - 135778131 t-----t-
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407972 2 -   2368649 t-----t-
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377847 2 - 200372422 T-----T-
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1396 2 -     84244 T-----T-
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                               261727 2 +  21539334 T-----T-
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3358147                               4690 2 -      8343 T-----T-
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253701 2 - 186649187 t-----t-
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hylobates_agilis.k141_1155965                               4737 2 +     12352 T-----T-
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11921 2 +     55766 T-----T-
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051519 2 + 191637585 T-----T-
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800397 2 +  11177569 T-----T-
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42146 2 +    110728 T-----T-
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3060 2 -     13097 T-----T-
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2814 2 +      5940 T-----T-
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2644 2 -      5717 T-----T-
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9011 2 -     11567 C-----T-
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10392 2 -     12945 C-----T-
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               331831 2 -   1826925 T-----T-
i Lophocebus_aterrimus.ctg367                            C 0 I 6
s Macaca_assamensis.Contig5                                 371802 1 -  60120075 ------T-
i Macaca_assamensis.Contig5                              C 0 I 15
s Macaca_cyclopis.k119_263443                                24061 2 +     30207 G-----T-
i Macaca_cyclopis.k119_263443                            I 7 I 11
s Macaca_fascicularis.k141_1397292                           21164 2 -     24934 G-----T-
i Macaca_fascicularis.k141_1397292                       C 0 I 11
s Macaca_fuscata.k119_546792                                 24014 2 +     30527 G-----T-
i Macaca_fuscata.k119_546792                             I 7 I 11
s Macaca_leonina.k141_321385                                 35200 2 -     50087 T-----T-
i Macaca_leonina.k141_321385                             C 0 I 14
s Macaca_mulatta.NC_041758.1                                414137 2 - 187317192 g-----t-
i Macaca_mulatta.NC_041758.1                             C 0 I 11
s Macaca_nemestrina.KQ007038.1                              398367 2 +  25927173 t-----t-
i Macaca_nemestrina.KQ007038.1                           C 0 I 11
s Macaca_nigra.k141_2818840                                  47539 2 -     62418 T-----T-
i Macaca_nigra.k141_2818840                              C 0 I 11
s Macaca_radiata.k141_3557992                                24187 2 +     24253 T-----T-
i Macaca_radiata.k141_3557992                            C 0 I 18
s Macaca_siberu.k141_2185972                                 44006 7 +     59329 TTTGTTT-
i Macaca_siberu.k141_2185972                             C 0 I 11
s Macaca_silenus.Contig273                                  269930 2 +    668171 T-----T-
i Macaca_silenus.Contig273                               C 0 I 13
s Macaca_thibetana.k99_503078                                  183 1 +      1732 ------T-
i Macaca_thibetana.k99_503078                            C 0 I 31
s Macaca_tonkeana.k141_339739                                 1717 2 +     17132 T-----T-
i Macaca_tonkeana.k141_339739                            C 0 I 11
s Mandrillus_leucophaeus.scaffold280                        321222 2 +  24302211 T-----T-
i Mandrillus_leucophaeus.scaffold280                     C 0 I 6
s Mandrillus_sphinx.Contig270                               356054 2 -    752769 T-----T-
i Mandrillus_sphinx.Contig270                            C 0 I 6
s Mico_argentatus.k141_582562                                 9186 2 +     17804 T-----T-
i Mico_argentatus.k141_582562                            I 2 C 0
s Mico_humeralifer.k141_1180625                               9688 2 -     12984 T-----T-
i Mico_humeralifer.k141_1180625                          I 2 C 0
s Mico_schneideri.k141_1877700                                     18002 2 -     26561 T-----T-
i Mico_schneideri.k141_1877700                                 I 2 C 0
s Miopithecus_ogouensis.k141_1534655                         21238 2 -     27822 T-----T-
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Nasalis_larvatus.k141_1350636                              27895 2 +     34575 T-----T-
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           52629 2 -    132029 T-----T-
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8724 2 -     16345 T-----T-
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14609 2 +     22201 T-----T-
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412830 2 -  22158432 T-----T-
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25007 2 -     54323 T-----T-
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_troglodytes.CM009242.2                               1471725 3 - 189151597 t-----tg
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   242058 2 - 183742232 t-----t-
i Papio_anubis.CM001495.2                                C 0 I 6
s Papio_cynocephalus.k141_1507553                             8522 2 +     21308 T-----T-
i Papio_cynocephalus.k141_1507553                        C 0 I 4
s Papio_hamadryas.Contig39                                  291094 2 -  20919399 T-----T-
i Papio_hamadryas.Contig39                               C 0 I 6
s Papio_kindae.k141_2214839                                  21177 2 -     27687 T-----T-
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14314 2 +     16796 T-----T-
i Papio_papio.k141_799093                                C 0 I 6
s Papio_ursinus.k141_2278143                                 21123 2 -     23640 T-----T-
i Papio_ursinus.k141_2278143                             C 0 I 6
s Piliocolobus_badius.k141_2704958                            1344 2 +     55023 T-----T-
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          897 1 -     89929 T-------
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1486 1 +     40849 T-------
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253150 1 +  14605196 t-------
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             63781 2 +    207309 T-----T-
i Pithecia_albicans.k141_1239476                         I 1 C 0
s Pithecia_chrysocephala.k141_785207                          4875 2 -     25401 T-----T-
i Pithecia_chrysocephala.k141_785207                     I 1 C 0
s Pithecia_hirsuta.k141_640380                               30616 2 +     58159 T-----T-
i Pithecia_hirsuta.k141_640380                           I 1 C 0
s Pithecia_mittermeieri.k141_1280039                         30892 2 +     63561 T-----T-
i Pithecia_mittermeieri.k141_1280039                     I 1 C 0
s Pithecia_pissinattii.k141_878371                           30652 2 +     51148 T-----T-
i Pithecia_pissinattii.k141_878371                       I 1 C 0
s Pithecia_pithecia.tarseq_165                              555622 2 -   4542175 T-----T-
i Pithecia_pithecia.tarseq_165                           I 1 C 0
s Pithecia_vanzolinii.k141_1369553                           30636 2 +     51125 T-----T-
i Pithecia_vanzolinii.k141_1369553                       I 1 C 0
s Plecturocebus_bernhardi.k141_2549090                        7042 2 +     39866 T-----T-
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2127 2 -      9282 T-----T-
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41530 2 -     87950 T-----T-
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41924 2 -     88961 T-----T-
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6622 2 -     39403 T-----T-
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41575 2 +     87928 T-----T-
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6620 1 -     60166 ------T-
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13556 2 -     67232 T-----T-
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41472 2 -     90634 T-----T-
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42940 1 +     89403 ------T-
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176849 2 - 189387572 t-----t-
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191666 2 -   9816681 T-----T-
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26478 2 +     69807 T-----T-
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43674 2 -     80239 T-----T-
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25852 2 +     91421 T-----T-
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152345 2 -   7812017 T-----T-
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6722 2 +     72585 T-----T-
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                              424 2 +      7119 T-----T-
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121033 1 + 195417433 ------t-
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235274 2 -   7961872 T-----T-
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               2920 2 +     27962 T-----T-
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2815 2 +      6077 T-----T-
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2905 2 +      5971 T-----T-
i Saguinus_imperator.k141_1898058                        C 0 I 1
s Saguinus_inustus.k141_2469308                               2829 1 +      5932 ------T-
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1170 2 -      4390 T-----T-
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390605 2 - 209938924 T-----T-
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2778 1 +      5979 ------T-
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3539 2 -      4301 T-----T-
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107947 2 + 121099817 t-----t-
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29508 2 -     47369 T-----T-
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29897 1 -     79414 ------T-
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26588 2 -     34454 T-----T-
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13994 2 -     22428 T-----T-
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29140 2 -     47109 T-----T-
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237200 2 +   5703754 T-----T-
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6790 2 +     21866 T-----T-
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         24171 2 +     27374 T-----T-
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27685 2 +     58920 T-----T-
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14181 2 -     45317 T-----T-
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21840 2 -     42441 T-----T-
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24520 2 -     29113 T-----T-
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27589 2 -     48123 T-----T-
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390091 2 +   1523678 T-----T-
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                5792 2 +      6850 T-----T-
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5843 2 +     20590 T-----T-
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352042 2 - 186847797 t-----t-
i Theropithecus_gelada.CM009954.1                        C 0 I 6
s Trachypithecus_auratus.k141_1189070                        19722 2 +     26378 T-----T-
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32395 2 -     78344 T-----T-
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19047 2 +     25722 T-----T-
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27346 2 -     62838 T-----T-
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27393 2 +     46913 T-----T-
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8202 2 -     28527 T-----T-
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29285 2 -     64340 T-----T-
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27322 2 -     63452 T-----T-
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8765 2 +     22490 T-----T-
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2193 2 -      6147 T-----T-
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9097 2 -     13050 T-----T-
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254337 2 -   6242583 T-----T-
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         361 2 +     19340 T-----T-
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
e Capromys_pilorides.CapPil_scaffold_108409                   6895 4 +      8835 I
e Chinchilla_lanigera.JH722012.1                           1237447 4 -   2543920 I
e Nannospalax_galili.KL204047.1                             944934 5 +   3037898 I
e Dasyprocta_punctata.DasPun_flattened_line_15900            26670 4 +     75252 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23238 4 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     30928 4 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005         546 4 +      9367 I
e Octodon_degus.JH651603.1                                11053103 4 -  11899542 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70354 4 +    143317 I
e Heterocephalus_glaber.JH602082.1                         1926085 4 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  8936 4 +     14636 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   4125 5 -     10735 I
e Dipodomys_ordii.KN672350.1                              18949178 5 -  37912305 I
e Dinomys_branickii.DinBra_scaffold_10381                    97482 4 -    115145 I
e Cuniculus_paca.CunPac_flattened_line_7025                   2913 4 +     36344 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  16435 4 +     50838 I
e Cavia_tschudii.CavTsc_scaffold_23560                       61510 4 -     66877 I
e Cavia_porcellus.DS562891.1                               4998409 4 +  23407841 I
e Cavia_aperea.AVPZ01000300.1                              4994967 4 +  23392119 I
e Microgale_talazaci.MicTal_scaffold_6613                    44260 4 +    145209 I
e Echinops_telfairi.JH980293.1                            62853191 4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              12494 4 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9107394 4 -  10337057 I
e Desmodus_rotundus.KZ672289.1                            11863560 8 -  20541912 I
e Perodicticus_potto.k141_1854441                            17193 0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          24825 0 +     31479 C
e Otolemur_garnettii.GL873799.1                             351548 0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        38545 0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563384 0 - 199412804 C
e Nycticebus_coucang.k141_3846325                             1903 0 -      3937 C
e Nycticebus_bengalensis.LG01                             93635145 0 + 196305487 C
e Loris_tardigradus.ctg83                                  5042810 0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            9149 0 +     19643 C
e Galagoides_demidoff.k141_561628                            18988 0 -     32986 C
e Galago_senegalensis.k141_991736                             6937 0 +     22493 C
e Galago_moholi.ctg3793                                     123392 0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            604571 4 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                 12995 4 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   18713 4 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2109022 4 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            11679 4 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     16721 4 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               4111 8 +      5315 I
e Tupaia_tana.TupTan_flattened_line_394                       7055 2 -     70247 I
e Tupaia_chinensis.KB320699.1                              1832735 2 -   4065304 I
e Zalophus_californianus.ZalCal_flattened_line_17732         27792 8 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                103891 8 -    112863 I
e Ursus_maritimus.KK499267.1                                180752 8 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              5573 8 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3582 13 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        38169 8 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1450594 8 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                197123 8 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11467998 8 -  31847680 I
e Mustela_putorius.JH418006.1                             14354015 13 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         7403 8 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             24868 227 -     74585 I
e Lycaon_pictus.CM007581.1                                41613530 8 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        812395 8 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24914979 13 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45105956 8 -  63665305 I
e Canis_lupus_familiaris.chr16                            41614375 8 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          221240 8 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     7897 8 -     23171 I
e CanFam4.chr16                                           42504261 8 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  3818 8 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            214556 8 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20414246 8 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_230229                      2269 4 +      2695 I
e Xerus_inauris.XerIna_scaffold_2302                        172995 4 -    224448 I
e Vicugna_pacos.KN270157.1                                   75231 7 +   5488506 I
e Varecia_variegata.k141_289850                              23052 0 -    147434 C
e Varecia_rubra.k141_787544                                  24145 0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    1355 4 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17360156 6 -  33153633 I
e Trichechus_manatus.JH594705.1                            6479338 4 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172227 4 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    478569 8 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    104451 8 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      190499 8 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                1589 4 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                12523 8 +     22964 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             123817 8 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1867217 4 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1857214 4 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    48093 6 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    114898 4 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6611 4 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73714 7 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2913686 7 +   3329780 I
e Rattus_norvegicus.chr16                                 37021383 6 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51958 2 +     55069 I
e Puma_concolor.QAVW01001104.1                            18097980 8 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3536301 7 -   4952924 I
e Pteropus_alecto.KB030862.1                               5839792 7 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            50543 8 -     66298 I
e Psammomys_obesus.NESX01036366.1                            35484 6 +     52041 I
e Propithecus_verreauxi.k141_1047036                          7170 0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       93533 0 -     98465 C
e Propithecus_perrieri.k141_1496898                          33262 0 +     46564 C
e Propithecus_edwardsi.k141_635656                            6937 0 -     30655 C
e Propithecus_diadema.k141_153680                             3201 0 -     11706 C
e Propithecus_coronatus.k141_209299                           2604 0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1564968 0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1981501 0 +   4620579 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3361 8 -      8168 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             2137 8 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_46867              11277 8 -     15039 I
e Peromyscus_maniculatus.KI615324.1                         245685 6 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13979 8 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1614461 4 +   2937107 I
e Panthera_tigris.KE722367.1                               3971386 8 +   8748460 I
e Panthera_pardus.KV860321.1                              18460666 8 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   23340 8 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       3538 4 +     17875 I
e Ovis_aries.CM001607.2                                   26403019 4 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107102557 4 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095419 8 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    2464 6 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    91605 6 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          13029 4 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         435037 4 -    630418 I
e Ochotona_princeps.JH802162.1                             2550085 4 -   3988456 I
e Noctilio_leporinus.NocLep_scaffold_7894                   126448 8 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226149 8 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118473 4 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                          594 8 +     18357 I
e Myotis_lucifugus.GL429869.1                               381764 8 +   4330536 I
e Myotis_davidii.KB100139.1                                4385945 8 +   6019432 I
e Myotis_brandtii.KE162005.1                               9791585 8 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             81645 4 -     86153 I
e Mus_spretus.CM004101.1                                  39495458 6 + 130317789 I
e Mus_pahari.LT608297.1                                   58216025 6 +  89631738 I
e Mus_musculus.chr8                                       41686138 6 + 129401213 I
e Mus_caroli.LT608237.1                                   35591780 6 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          37536 8 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   17410 8 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  23194 4 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 177661 8 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351980 8 +    437263 I
e Mirza_zaza.k141_766280                                     51274 0 -     62432 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             40499 8 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6361598 8 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15961246 6 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                183501 8 +    200668 I
e Microcebus_murinus.CM007674.1                           74983485 0 +  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     80090 8 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17428110 6 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 47911 6 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       149267 8 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7499859 4 +  40650429 I
e Manis_pentadactyla.KN006162.1                             219708 8 +    317179 I
e Manis_javanica.JSZB01003497.1                             672421 8 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                222107 7 -    270270 I
e Macaca_maura.k141_1103459                                  44957 3 +     51645 I
e Macaca_arctoides.k141_1757516                              44147 9 -     61512 I
e Loxodonta_africana.GL010049.1                           39079878 4 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333544 8 +    662738 I
e Lepilemur_septentrionalis.k141_360456                       7881 0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          7881 0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              7871 0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          7875 0 +     29618 C
e Lemur_catta.scaffold_24                                 14758346 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    61054 8 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64505 6 -     97402 I
e Jaculus_jaculus.JH725527.1                               1238021 4 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                2024 8 -     16823 I
e Indri_indri.k141_2415743                                    1207 0 +     11955 C
e Ictidomys_tridecemlineatus.JH393364.1                     385638 4 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       3032 4 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  68576 8 +     83186 I
e Hoolock_leuconedys.ctg274                                    141706 1 -    630532 I
e Hipposideros_galeritus.HipGal_scaffold_23202               49669 7 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6500 8 -     36432 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7899 4 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                29657 8 -    327341 I
e Hapalemur_occidentalis.k141_578367                         15697 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          8697 0 -     42923 C
e Hapalemur_griseus.k141_763500                              59824 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             34955 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          13553 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_10447                     562 4 -     78134 I
e Glis_glis.GliGli_scaffold_33859                            33065 4 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90145 4 -     95226 I
e Galeopterus_variegatus.GalVar_scaffold_74466               17944 4 +     18121 I
e Felis_nigripes.FelNig_flattened_line_31944                 26519 8 -     30238 I
e Felis_catus_fca126.CM031415.1                          185115417 8 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              57870 0 -    111500 C
e Eulemur_rufus.k141_514691                                  41466 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            3745 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 47020 0 -     97555 C
e Eulemur_macaco.k141_1562045                                22826 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 52193 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             41871 0 +     68309 C
e Eulemur_coronatus.k141_384460                              85298 0 +    112731 C
e Eulemur_collaris.k141_601111                               41336 0 -     70999 C
e Eulemur_albifrons.k141_51491                               13628 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             4004 8 +      7672 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           63787 8 -    133382 I
e Equus_przewalskii.KK951119.1                              410751 0 -    498745 C
e Equus_caballus.CM000403.2                               21373965 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041 0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12577188 8 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           11809 6 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          29834 6 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238466 4 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               5142 7 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  138124 8 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  663338 8 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18624237 8 -  35494412 I
e Daubentonia_madagascariensis.ctg71                        291455 0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    643803 4 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              3180 8 +     87169 I
e Cricetulus_griseus.LT883664.1                          213113559 6 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 41111 6 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          1682 4 -      8242 I
e Condylura_cristata.JH655891.1                           35806108 4 +  53390261 I
e Cheirogaleus_medius.k141_759766                             4020 0 -     15404 C
e Cheirogaleus_major.k141_666340                             29503 0 -     33796 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17880 8 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75571 2698 -    217609 I
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Capra_hircus.CM004588.1                                 26590065 4 +  44709034 I
e Capra_aegagrus.CM003241.1                               27407792 4 -  46296322 I
e Camelus_ferus.KB017975.1                                 1207843 7 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4664183 7 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7629897 7 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1528726 4 -   4408762 I
e Bos_taurus.CM000203.6                                   27543702 4 -  45695690 I
e Bos_mutus.JH880303.1                                      753563 4 +   1948126 I
e Bos_indicus.CM003047.1                                  20354995 4 +  48749331 I
e Bison_bison.KN261452.1                                     20608 4 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     85075 4 +    124022 I
e Balaenoptera_bonaerensis.DF507193.1                         3117 8 -      4711 I
e Balaenoptera_acutorostrata.KI537508.1                    7955908 8 -  23207421 I
e Avahi_peyrierasi.k141_1823318                               5090 0 -     19611 C
e Avahi_laniger.k141_2756659                                  5084 0 +     11645 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      14876 1 -     32367 I
e Aotus_vociferans.k141_944972                                8126 0 +      8415 C
e Aotus_trivirgatus.k141_192090                              22990 0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                671348 0 +   5030052 C
e Aotus_griseimembra.k141_982342                             43335 0 +     43593 C
e Aotus_azarae.k141_118258                                   49582 0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49179 4 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      175530 8 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1584080 4 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    16837 4 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     18798 6 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           811719 8 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4375 10 +     36723 TTTTGTTTTG
s Gorilla_gorilla.LT578336.1                                 70183  1 +  33314783 ---------g
i Gorilla_gorilla.LT578336.1                             I 114 C 0
s Hylobates_agilis.k141_1155965                               4739  1 +     12352 ---------G
i Hylobates_agilis.k141_1155965                          C 0 I 2
s Hylobates_klossii.k141_738755                              11923  1 +     55766 ---------G
i Hylobates_klossii.k141_738755                          C 0 I 2
s Hylobates_pileatus_b.LG02                                       2051521  1 + 191637585 ---------G
i Hylobates_pileatus_b.LG02                                     C 0 I 2
s Hylobates_pileatus_a.tarseq_633                            7800399  1 +  11177569 ---------G
i Hylobates_pileatus_a.tarseq_633                          C 0 I 2
s Nomascus_annamensis.k141_1771965                           52631  1 -    132029 ---------G
i Nomascus_annamensis.k141_1771965                       C 0 I 2
s Nomascus_concolor.k141_735679                               8726  1 -     16345 ---------G
i Nomascus_concolor.k141_735679                          C 0 I 2
s Nomascus_gabriellae.k141_57920                             14611  1 +     22201 ---------G
i Nomascus_gabriellae.k141_57920                         C 0 I 2
s Nomascus_siki_b.tarseq_93                            8412832  1 -  22158432 ---------G
i Nomascus_siki_b.tarseq_93                          C 0 I 2
s Nomascus_siki_a.k141_941534                                  25009  1 -     54323 ---------G
i Nomascus_siki_a.k141_941534                              C 0 I 2
s Pan_troglodytes.CM009242.2                               1471728  4 - 189151597 tttt------
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pongo_abelii.CM009266.2                                   176851  1 - 189387572 ---------g
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191668  1 -   9816681 ---------G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390093  1 +   1523678 ---------G
i Symphalangus_syndactylus.tarseq_199                    C 0 I 2
e Capromys_pilorides.CapPil_scaffold_108409                   6895  4 +      8835 I
e Chinchilla_lanigera.JH722012.1                           1237447  4 -   2543920 I
e Nannospalax_galili.KL204047.1                             944934  5 +   3037898 I
e Saimiri_ustus.k141_360372                                  29142  0 -     47109 C
e Saimiri_sciureus.k141_1467173                              13996  0 -     22428 C
e Saimiri_oerstedii.k141_245838                              26590  0 -     34454 C
e Saimiri_macrodon.k141_1173117                              29898  0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       29510  0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1107949  0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            26670  4 +     75252 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23238  4 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     30928  4 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005         546  4 +      9367 I
e Octodon_degus.JH651603.1                                11053103  4 -  11899542 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70354  4 +    143317 I
e Heterocephalus_glaber.JH602082.1                         1926085  4 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  8936  4 +     14636 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   4125  5 -     10735 I
e Dipodomys_ordii.KN672350.1                              18949178  5 -  37912305 I
e Dinomys_branickii.DinBra_scaffold_10381                    97482  4 -    115145 I
e Cuniculus_paca.CunPac_flattened_line_7025                   2913  4 +     36344 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  16435  4 +     50838 I
e Cavia_tschudii.CavTsc_scaffold_23560                       61510  4 -     66877 I
e Cavia_porcellus.DS562891.1                               4998409  4 +  23407841 I
e Cavia_aperea.AVPZ01000300.1                              4994967  4 +  23392119 I
e Microgale_talazaci.MicTal_scaffold_6613                    44260  4 +    145209 I
e Echinops_telfairi.JH980293.1                            62853191  4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              12494  4 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9107394  4 -  10337057 I
e Desmodus_rotundus.KZ672289.1                            11863560  8 -  20541912 I
e Pygathrix_nigripes_a.k141_215492                              6724  0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  152347  0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             25854  0 +     91421 C
e Callibella_humilis.k141_1233062                             9078  0 +     18648 C
e Perodicticus_potto.k141_1854441                            17193  0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          24825  0 +     31479 C
e Otolemur_garnettii.GL873799.1                             351548  0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        38545  0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563384  0 - 199412804 C
e Nycticebus_coucang.k141_3846325                             1903  0 -      3937 C
e Nycticebus_bengalensis.LG01                             93635145  0 + 196305487 C
e Loris_tardigradus.ctg83                                  5042810  0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            9149  0 +     19643 C
e Galagoides_demidoff.k141_561628                            18988  0 -     32986 C
e Galago_senegalensis.k141_991736                             6937  0 +     22493 C
e Galago_moholi.ctg3793                                     123392  0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Allochrocebus_solatus.k141_3554717                         16958  0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         15285  0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            604571  4 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                 12995  4 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   18713  4 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2109022  4 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            11679  4 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     16721  4 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               4111  8 +      5315 I
e Tupaia_tana.TupTan_flattened_line_394                       7055  2 -     70247 I
e Tupaia_chinensis.KB320699.1                              1832735  2 -   4065304 I
e Zalophus_californianus.ZalCal_flattened_line_17732         27792  8 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                103891  8 -    112863 I
e Ursus_maritimus.KK499267.1                                180752  8 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              5573  8 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3582 13 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        38169  8 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1450594  8 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                197123  8 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11467998  8 -  31847680 I
e Mustela_putorius.JH418006.1                             14354015 13 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         7403  8 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             24868 227 -     74585 I
e Lycaon_pictus.CM007581.1                                41613530  8 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        812395  8 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24914979 13 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45105956  8 -  63665305 I
e Canis_lupus_familiaris.chr16                            41614375  8 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          221240  8 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     7897  8 -     23171 I
e CanFam4.chr16                                           42504261  8 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  3818  8 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            214556  8 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20414246  8 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_230229                      2269  4 +      2695 I
e Xerus_inauris.XerIna_scaffold_2302                        172995  4 -    224448 I
e Vicugna_pacos.KN270157.1                                   75231  7 +   5488506 I
e Varecia_variegata.k141_289850                              23052  0 -    147434 C
e Varecia_rubra.k141_787544                                  24145  0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    1355  4 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17360156  6 -  33153633 I
e Trichechus_manatus.JH594705.1                            6479338  4 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172227  4 -    200418 I
e Trachypithecus_pileatus.k141_2622778                         363  0 +     19340 C
e Trachypithecus_phayrei.ctg124                             254339  0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                         9099  0 -     13050 C
e Trachypithecus_melamera.k141_591572                         2195  0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                     8767  0 +     22490 C
e Trachypithecus_laotum.k141_928651                          27324  0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      29287  0 -     64340 C
e Trachypithecus_germaini.k141_57262                          8204  0 -     28527 C
e Trachypithecus_geei.k141_1001272                           27395  0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      27348  0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       19049  0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     32397  0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        19724  0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    478569  8 -    610378 I
e Theropithecus_gelada.CM009954.1                           352044  6 - 186847797 I
e Tarsius_wallacei.k141_226975                                5845  0 +     20590 C
e Tarsius_lariang.k141_1780720                                5794  0 +      6850 C
e Tapirus_terrestris.TapTer_scaffold_755                    104451  8 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      190499  8 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                1589  4 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                12523  8 +     22964 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             123817  8 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1867217  4 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1857214  4 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    48093  6 +     77746 I
e Semnopithecus_vetulus.k141_244474                          27591  0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     24522  0 -     29113 C
e Semnopithecus_priam.k141_714795                            21842  0 -     42441 C
e Semnopithecus_johnii.k141_843753                           14183  0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      27687  0 +     58920 C
e Semnopithecus_entellus.k141_158471                         24173  0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    114898  4 +    313613 I
e Sapajus_macrocephalus.k141_796559                           6792  0 +     21866 C
e Sapajus_apella.ctg103                                     237202  0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        6611  4 +     16473 I
e Saguinus_oedipus.k141_1466288                               3541  0 -      4301 C
e Saguinus_mystax.k141_8077960                                2779  0 +      5979 C
e Saguinus_midas.LG03                                       390607  0 - 209938924 C
e Saguinus_labiatus.k141_2380921                              1172  0 -      4390 C
e Saguinus_inustus.k141_2469308                               2830  0 +      5932 C
e Saguinus_imperator.k141_1898058                             2907  1 +      5971 I
e Saguinus_geoffroyi.k141_3779887                             2817  0 +      6077 C
e Saguinus_bicolor.k141_1429097                               2922  0 +     27962 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73714  7 -    116970 I
e Rhinopithecus_strykeri.ctg102                             235276  0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104121034  0 + 195417433 C
e Rhinopithecus_bieti.k119_778604                              426  0 +      7119 C
e Rhinolophus_sinicus.LVEH01000134.1                       2913686  7 +   3329780 I
e Rattus_norvegicus.chr16                                 37021383  6 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51958  2 +     55069 I
e Puma_concolor.QAVW01001104.1                            18097980  8 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3536301  7 -   4952924 I
e Pteropus_alecto.KB030862.1                               5839792  7 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            50543  8 -     66298 I
e Psammomys_obesus.NESX01036366.1                            35484  6 +     52041 I
e Propithecus_verreauxi.k141_1047036                          7170  0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       93533  0 -     98465 C
e Propithecus_perrieri.k141_1496898                          33262  0 +     46564 C
e Propithecus_edwardsi.k141_635656                            6937  0 -     30655 C
e Propithecus_diadema.k141_153680                             3201  0 -     11706 C
e Propithecus_coronatus.k141_209299                           2604  0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1564968  0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1981501  0 +   4620579 C
e Presbytis_mitrata.k141_584736                              43676  0 -     80239 C
e Presbytis_comata.k141_1230337                              26480  0 +     69807 C
e Plecturocebus_moloch.k141_1031110                          42941  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          41474  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      13558  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          6621  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          41577  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          6624  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     41926  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       41532  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          2129  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        7044  0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3361  8 -      8168 I
e Pithecia_vanzolinii.k141_1369553                           30638  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              555624  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           30654  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         30894  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               30618  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          4877  0 -     25401 C
e Pithecia_albicans.k141_1239476                             63783  0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             2137  8 +     22231 I
e Piliocolobus_tephrosceles.PDMG02000141.1                  253151  0 +  14605196 C
e Piliocolobus_kirkii.k141_1310104                            1487  0 +     40849 C
e Piliocolobus_gordonorum.k141_381342                          898  0 -     89929 C
e Piliocolobus_badius.k141_2704958                            1346  0 +     55023 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11277  8 -     15039 I
e Peromyscus_maniculatus.KI615324.1                         245685  6 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13979  8 +     78924 I
e Papio_ursinus.k141_2278143                                 21125  6 -     23640 I
e Papio_papio.k141_799093                                    14316  6 +     16796 I
e Papio_kindae.k141_2214839                                  21179  0 -     27687 C
e Papio_hamadryas.Contig39                                  291096  6 -  20919399 I
e Papio_cynocephalus.k141_1507553                             8524  4 +     21308 I
e Papio_anubis.CM001495.2                                   242060  6 - 183742232 I
e Pantholops_hodgsonii.KE114653.1                          1614461  4 +   2937107 I
e Panthera_tigris.KE722367.1                               3971386  8 +   8748460 I
e Panthera_pardus.KV860321.1                              18460666  8 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   23340  8 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       3538  4 +     17875 I
e Ovis_aries.CM001607.2                                   26403019  4 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107102557  4 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095419  8 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    2464  6 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    91605  6 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          13029  4 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         435037  4 -    630418 I
e Ochotona_princeps.JH802162.1                             2550085  4 -   3988456 I
e Noctilio_leporinus.NocLep_scaffold_7894                   126448  8 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226149  8 -   7148211 I
e Nasalis_larvatus.k141_1350636                              27897  0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118473  4 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                          594  8 +     18357 I
e Myotis_lucifugus.GL429869.1                               381764  8 +   4330536 I
e Myotis_davidii.KB100139.1                                4385945  8 +   6019432 I
e Myotis_brandtii.KE162005.1                               9791585  8 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             81645  4 -     86153 I
e Mus_spretus.CM004101.1                                  39495458  6 + 130317789 I
e Mus_pahari.LT608297.1                                   58216025  6 +  89631738 I
e Mus_musculus.chr8                                       41686138  6 + 129401213 I
e Mus_caroli.LT608237.1                                   35591780  6 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          37536  8 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   17410  8 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  23194  4 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 177661  8 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351980  8 +    437263 I
e Mirza_zaza.k141_766280                                     51274  0 -     62432 C
e Miopithecus_ogouensis.k141_1534655                         21240  0 -     27822 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             40499  8 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6361598  8 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15961246  6 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                183501  8 +    200668 I
e Microcebus_murinus.CM007674.1                           74983485  0 +  93316391 C
e Mico_schneideri.k141_1877700                                     18004  0 -     26561 C
e Mico_humeralifer.k141_1180625                               9690  0 -     12984 C
e Mico_argentatus.k141_582562                                 9188  0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     80090  8 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17428110  6 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 47911  6 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       149267  8 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7499859  4 +  40650429 I
e Manis_pentadactyla.KN006162.1                             219708  8 +    317179 I
e Manis_javanica.JSZB01003497.1                             672421  8 -    737560 I
e Mandrillus_sphinx.Contig270                               356056  6 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        321224  6 +  24302211 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                222107  7 -    270270 I
e Macaca_tonkeana.k141_339739                                 1719 11 +     17132 I
e Macaca_thibetana.k99_503078                                  184 31 +      1732 I
e Macaca_silenus.Contig273                                  269932 13 +    668171 I
e Macaca_siberu.k141_2185972                                 44013 11 +     59329 I
e Macaca_radiata.k141_3557992                                24189 18 +     24253 I
e Macaca_nigra.k141_2818840                                  47541 11 -     62418 I
e Macaca_nemestrina.KQ007038.1                              398369 11 +  25927173 I
e Macaca_mulatta.NC_041758.1                                414139 11 - 187317192 I
e Macaca_maura.k141_1103459                                  44957  3 +     51645 I
e Macaca_leonina.k141_321385                                 35202 14 -     50087 I
e Macaca_fuscata.k119_546792                                 24016 11 +     30527 I
e Macaca_fascicularis.k141_1397292                           21166 11 -     24934 I
e Macaca_cyclopis.k119_263443                                24063 11 +     30207 I
e Macaca_assamensis.Contig5                                 371803 15 -  60120075 I
e Macaca_arctoides.k141_1757516                              44147  9 -     61512 I
e Loxodonta_africana.GL010049.1                           39079878  4 +  43346337 I
e Lophocebus_aterrimus.ctg367                               331833  6 -   1826925 I
e Lipotes_vexillifer.KE559953.1                             333544  8 +    662738 I
e Lepilemur_septentrionalis.k141_360456                       7881  0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          7881  0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              7871  0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          7875  0 +     29618 C
e Leontopithecus_rosalia.k141_349454                         10394  0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     9013  0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        2646  0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           2816  0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        3062  0 -     13097 C
e Lemur_catta.scaffold_24                                 14758346  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    61054  8 -     65777 I
e Lagothrix_lagothricha.k141_246028                          42148  0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 64505  6 -     97402 I
e Jaculus_jaculus.JH725527.1                               1238021  4 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                2024  8 -     16823 I
e Indri_indri.k141_2415743                                    1207  0 +     11955 C
e Ictidomys_tridecemlineatus.JH393364.1                     385638  4 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       3032  4 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  68576  8 +     83186 I
e Hoolock_leuconedys.ctg274                                    141706  1 -    630532 I
e Hipposideros_galeritus.HipGal_scaffold_23202               49669  7 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6500  8 -     36432 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7899  4 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                29657  8 -    327341 I
e Hapalemur_occidentalis.k141_578367                         15697  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          8697  0 -     42923 C
e Hapalemur_griseus.k141_763500                              59824  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             34955  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          13553  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_10447                     562  4 -     78134 I
e Gorilla_beringei.k141_3358147                               4692  0 -      8343 C
e Glis_glis.GliGli_scaffold_33859                            33065  4 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90145  4 -     95226 I
e Galeopterus_variegatus.GalVar_scaffold_74466               17944  4 +     18121 I
e Felis_nigripes.FelNig_flattened_line_31944                 26519  8 -     30238 I
e Felis_catus_fca126.CM031415.1                          185115417  8 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              57870  0 -    111500 C
e Eulemur_rufus.k141_514691                                  41466  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            3745  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 47020  0 -     97555 C
e Eulemur_macaco.k141_1562045                                22826  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 52193  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             41871  0 +     68309 C
e Eulemur_coronatus.k141_384460                              85298  0 +    112731 C
e Eulemur_collaris.k141_601111                               41336  0 -     70999 C
e Eulemur_albifrons.k141_51491                               13628  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             4004  8 +      7672 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           63787  8 -    133382 I
e Erythrocebus_patas.Contig38                               261729  0 +  21539334 C
e Equus_przewalskii.KK951119.1                              410751  0 -    498745 C
e Equus_caballus.CM000403.2                               21373965  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041  0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12577188  8 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           11809  6 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          29834  6 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238466  4 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               5142  7 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  138124  8 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  663338  8 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18624237  8 -  35494412 I
e Daubentonia_madagascariensis.ctg71                        291455  0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    643803  4 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              3180  8 +     87169 I
e Cricetulus_griseus.LT883664.1                          213113559  6 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 41111  6 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          1682  4 -      8242 I
e Condylura_cristata.JH655891.1                           35806108  4 +  53390261 I
e Colobus_polykomos.k141_906115                               1398  0 -     84244 C
e Colobus_guereza.LG01                                      377849  0 - 200372422 C
e Colobus_angolensis.KN981557.1                             407974  0 -   2368649 C
e Chlorocebus_sabaeus.CM001947.1                            303526  0 - 135778131 C
e Chlorocebus_pygerythrus.k141_3063162                        8748  0 -     44032 C
e Chlorocebus_aethiops.ctg25                                342201  0 +  18827391 C
e Chiropotes_sagulatus.k141_1113111                           6991  0 +     34062 C
e Chiropotes_israelita.k141_313004                           41420  0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           2925  0 +      5346 C
e Cheracebus_torquatus.k141_890198                           18337  0 +     39636 C
e Cheracebus_regulus.k141_471822                             18544  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             18289  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             7876  0 -     32913 C
e Cheirogaleus_medius.k141_759766                             4020  0 -     15404 C
e Cheirogaleus_major.k141_666340                             29503  0 -     33796 C
e Cercopithecus_roloway.k141_3012935                         21308  0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           24381  0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         1984  0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       25828  0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        30885  0 -     45857 C
e Cercopithecus_mona.ctg39                                  268551  0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  362840  0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                           10244  0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          26419  0 -     34525 C
e Cercopithecus_diana.k141_132293                            10694  0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           5623  0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        25654  0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          43434  2 -    148725 I
e Cercocebus_lunulatus.k141_2779015                          43448  2 -     44860 I
e Cercocebus_chrysogaster.k141_1522556                       43620  3 +     47900 I
e Cercocebus_atys.KQ010504.1                                139879  2 -   4669795 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17880  8 +     27315 I
e Cephalopachus_bancanus.k141_1689090                         1099  0 -      5494 C
e Cebus_unicolor.k141_1654760                                65969  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                6874  0 -     34880 C
e Cebus_albifrons.Contig27                                  369985  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               42053  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           3996  0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75571 2698 -    217609 I
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Carlito_syrichta.NW_007259797.1                           269168  0 +    496798 C
e Capra_hircus.CM004588.1                                 26590065  4 +  44709034 I
e Capra_aegagrus.CM003241.1                               27407792  4 -  46296322 I
e Camelus_ferus.KB017975.1                                 1207843  7 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4664183  7 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7629897  7 +  17673402 I
e Callithrix_kuhlii.k119_102356                                600  0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165453078  0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                             685  0 -      8861 C
e Callimico_goeldii.k141_1609886                              8617  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         19525  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  19612  0 +     95584 C
e Cacajao_calvus.k141_89051                                  42086  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   6792  0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528726  4 -   4408762 I
e Bos_taurus.CM000203.6                                   27543702  4 -  45695690 I
e Bos_mutus.JH880303.1                                      753563  4 +   1948126 I
e Bos_indicus.CM003047.1                                  20354995  4 +  48749331 I
e Bison_bison.KN261452.1                                     20608  4 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     85075  4 +    124022 I
e Balaenoptera_bonaerensis.DF507193.1                         3117  8 -      4711 I
e Balaenoptera_acutorostrata.KI537508.1                    7955908  8 -  23207421 I
e Avahi_peyrierasi.k141_1823318                               5090  0 -     19611 C
e Avahi_laniger.k141_2756659                                  5084  0 +     11645 C
e Ateles_paniscus.k141_866194                                21891  0 -     33135 C
e Ateles_marginatus.k141_970259                              47832  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              32461  0 +     44353 C
e Ateles_chamek.k141_615173                                   4909  0 -     28759 C
e Ateles_belzebuth.k141_1572163                               9771  1 +     48076 I
e Ateles_geoffroyi_b.tarseq_1536                               273604  0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      14876  1 -     32367 I
e Aotus_vociferans.k141_944972                                8126  0 +      8415 C
e Aotus_trivirgatus.k141_192090                              22990  0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                671348  0 +   5030052 C
e Aotus_griseimembra.k141_982342                             43335  0 +     43593 C
e Aotus_azarae.k141_118258                                   49582  0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49179  4 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      175530  8 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1584080  4 +   2318259 I
e Alouatta_seniculus.k141_928287                             31854  0 +     42133 C
e Alouatta_puruensis.k141_251022                              7718  0 +     30854 C
e Alouatta_palliata.k141_638677                              45541  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             39896  0 +     45454 C
e Alouatta_macconnelli.k141_361275                           22910  0 -     24835 C
e Alouatta_juara.k141_1687208                                41271  0 -     64179 C
e Alouatta_discolor.k141_2561099                             42820  0 +     55831 C
e Alouatta_caraya.k141_1109140                               43381  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             71142  0 -     84148 C
e Allochrocebus_lhoesti.k141_441277                          42648  0 +     44087 C
e Allenopithecus_nigroviridis.k141_3755588                   46699  0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    16837  4 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     18798  6 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           811719  8 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4385 1 +     36723 T
s Allenopithecus_nigroviridis.k141_3755588                   46699 1 +     53615 T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42648 1 +     44087 T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15285 1 -     21945 T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16958 1 +     32033 T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71142 1 -     84148 T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43381 1 -     78289 T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42820 1 +     55831 T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41271 1 -     64179 T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22910 1 -     24835 T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39896 1 +     45454 T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45541 1 +     70886 T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7718 1 +     30854 T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31854 1 +     42133 T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273604 1 +  21539123 T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9772 1 +     48076 T
i Ateles_belzebuth.k141_1572163                          I 1 C 0
s Ateles_chamek.k141_615173                                   4909 1 -     28759 T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32461 1 +     44353 T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47832 1 -     71267 T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21891 1 -     33135 T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Callibella_humilis.k141_1233062                             9078 1 +     18648 T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8617 1 -     13885 T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             685 1 -      8861 T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453078 1 + 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                600 1 +      8664 T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269168 1 +    496798 T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cebuella_niveiventris.k141_592277                           3996 1 -     12580 T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42053 1 +     53515 T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369985 1 -  26074798 T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6874 1 -     34880 T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65969 1 -     89041 T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1099 1 -      5494 T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                139881 1 -   4669795 t
i Cercocebus_atys.KQ010504.1                             I 2 C 0
s Cercocebus_chrysogaster.k141_1522556                       43623 1 +     47900 T
i Cercocebus_chrysogaster.k141_1522556                   I 3 C 0
s Cercocebus_lunulatus.k141_2779015                          43450 1 -     44860 T
i Cercocebus_lunulatus.k141_2779015                      I 2 C 0
s Cercocebus_torquatus.k141_2159127                          43436 1 -    148725 T
i Cercocebus_torquatus.k141_2159127                      I 2 C 0
s Cercopithecus_ascanius.k141_3120866                        25654 1 -     40656 A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5623 1 +     20796 T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10694 1 -     17524 T
i Cercopithecus_diana.k141_132293                        C 0 I 3
s Cercopithecus_hamlyni.k141_566925                          26419 1 -     34525 T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10244 1 -     25376 T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362840 1 -  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268551 1 +  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30885 1 -     45857 T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25828 1 -     32606 T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1984 1 +      8499 T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24381 1 +     70610 T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21308 1 +     36323 T
i Cercopithecus_roloway.k141_3012935                     C 0 I 3
s Cheracebus_lucifer.k141_2312002                             7876 1 -     32913 T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18289 1 -     40346 T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18544 1 +    216457 T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18337 1 +     39636 T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2925 1 +      5346 T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41420 1 -    112038 T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6991 1 +     34062 T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342201 1 +  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8748 1 -     44032 T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303526 1 - 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407974 1 -   2368649 t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377849 1 - 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1398 1 -     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                               261729 1 +  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_gorilla.LT578336.1                                 70184 1 +  33314783 t
i Gorilla_gorilla.LT578336.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    141707 1 -    630532 T
i Hoolock_leuconedys.ctg274                                 I 1 C 0
s Hylobates_agilis.k141_1155965                               4742 1 +     12352 T
i Hylobates_agilis.k141_1155965                          I 2 C 0
s Hylobates_klossii.k141_738755                              11926 1 +     55766 T
i Hylobates_klossii.k141_738755                          I 2 C 0
s Hylobates_pileatus_b.LG02                                       2051524 1 + 191637585 T
i Hylobates_pileatus_b.LG02                                     I 2 C 0
s Hylobates_pileatus_a.tarseq_633                            7800402 1 +  11177569 T
i Hylobates_pileatus_a.tarseq_633                          I 2 C 0
s Lagothrix_lagothricha.k141_246028                          42148 1 +    110728 T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3062 1 -     13097 T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2816 1 +      5940 T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2646 1 -      5717 T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9013 1 -     11567 T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10394 1 -     12945 T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               331839 1 -   1826925 T
i Lophocebus_aterrimus.ctg367                            I 6 C 0
s Macaca_arctoides.k141_1757516                              44156 1 -     61512 A
i Macaca_arctoides.k141_1757516                          I 9 C 0
s Macaca_assamensis.Contig5                                 371818 1 -  60120075 T
i Macaca_assamensis.Contig5                              I 15 C 0
s Macaca_cyclopis.k119_263443                                24074 1 +     30207 T
i Macaca_cyclopis.k119_263443                            I 11 I 2
s Macaca_fascicularis.k141_1397292                           21177 1 -     24934 T
i Macaca_fascicularis.k141_1397292                       I 11 I 2
s Macaca_fuscata.k119_546792                                 24027 1 +     30527 T
i Macaca_fuscata.k119_546792                             I 11 I 2
s Macaca_mulatta.NC_041758.1                                414150 1 - 187317192 t
i Macaca_mulatta.NC_041758.1                             I 11 I 2
s Macaca_nemestrina.KQ007038.1                              398380 1 +  25927173 t
i Macaca_nemestrina.KQ007038.1                           I 11 I 2
s Macaca_nigra.k141_2818840                                  47552 1 -     62418 T
i Macaca_nigra.k141_2818840                              I 11 I 2
s Macaca_radiata.k141_3557992                                24207 1 +     24253 T
i Macaca_radiata.k141_3557992                            I 18 C 0
s Macaca_siberu.k141_2185972                                 44024 1 +     59329 T
i Macaca_siberu.k141_2185972                             I 11 I 2
s Macaca_thibetana.k99_503078                                  215 1 +      1732 T
i Macaca_thibetana.k99_503078                            I 31 C 0
s Macaca_tonkeana.k141_339739                                 1730 1 +     17132 T
i Macaca_tonkeana.k141_339739                            I 11 I 2
s Mandrillus_leucophaeus.scaffold280                        321230 1 +  24302211 T
i Mandrillus_leucophaeus.scaffold280                     I 6 C 0
s Mandrillus_sphinx.Contig270                               356062 1 -    752769 T
i Mandrillus_sphinx.Contig270                            I 6 C 0
s Mico_argentatus.k141_582562                                 9188 1 +     17804 T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9690 1 -     12984 T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18004 1 -     26561 T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21240 1 -     27822 T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Nasalis_larvatus.k141_1350636                              27897 1 +     34575 T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           52634 1 -    132029 T
i Nomascus_annamensis.k141_1771965                       I 2 C 0
s Nomascus_concolor.k141_735679                               8729 1 -     16345 T
i Nomascus_concolor.k141_735679                          I 2 C 0
s Nomascus_gabriellae.k141_57920                             14614 1 +     22201 T
i Nomascus_gabriellae.k141_57920                         I 2 C 0
s Nomascus_siki_b.tarseq_93                            8412835 1 -  22158432 T
i Nomascus_siki_b.tarseq_93                          I 2 C 0
s Nomascus_siki_a.k141_941534                                  25012 1 -     54323 T
i Nomascus_siki_a.k141_941534                              I 2 C 0
s Papio_anubis.CM001495.2                                   242066 1 - 183742232 t
i Papio_anubis.CM001495.2                                I 6 C 0
s Papio_cynocephalus.k141_1507553                             8528 1 +     21308 T
i Papio_cynocephalus.k141_1507553                        I 4 C 0
s Papio_hamadryas.Contig39                                  291102 1 -  20919399 T
i Papio_hamadryas.Contig39                               I 6 C 0
s Papio_papio.k141_799093                                    14322 1 +     16796 T
i Papio_papio.k141_799093                                I 6 C 0
s Papio_ursinus.k141_2278143                                 21131 1 -     23640 T
i Papio_ursinus.k141_2278143                             I 6 C 0
s Piliocolobus_badius.k141_2704958                            1346 1 +     55023 T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4877 1 -     25401 T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30618 1 +     58159 T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30894 1 +     63561 T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30654 1 +     51148 T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555624 1 -   4542175 T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30638 1 +     51125 T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7044 1 +     39866 T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2129 1 -      9282 T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41532 1 -     87950 T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41926 1 -     88961 T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6624 1 -     39403 T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41577 1 +     87928 T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6621 1 -     60166 T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13558 1 -     67232 T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41474 1 -     90634 T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42941 1 +     89403 T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176852 1 - 189387572 t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191669 1 -   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26480 1 +     69807 T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43676 1 -     80239 T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25854 1 +     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152347 1 -   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 I 4
s Pygathrix_nigripes_a.k141_215492                              6724 1 +     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                              426 1 +      7119 A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121034 1 + 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235276 1 -   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               2922 1 +     27962 T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2817 1 +      6077 T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2908 1 +      5971 T
i Saguinus_imperator.k141_1898058                        I 1 C 0
s Saguinus_inustus.k141_2469308                               2830 1 +      5932 T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1172 1 -      4390 T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390607 1 - 209938924 T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2779 1 +      5979 T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3541 1 -      4301 T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107949 1 + 121099817 t
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29510 1 -     47369 T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29898 1 -     79414 T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26590 1 -     34454 T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13996 1 -     22428 T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29142 1 -     47109 T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237202 1 +   5703754 T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6792 1 +     21866 T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         24173 1 +     27374 T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27687 1 +     58920 T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14183 1 -     45317 T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21842 1 -     42441 T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24522 1 -     29113 T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27591 1 -     48123 T
i Semnopithecus_vetulus.k141_244474                      C 0 I 3
s Symphalangus_syndactylus.tarseq_199                       390096 1 +   1523678 T
i Symphalangus_syndactylus.tarseq_199                    I 2 C 0
s Tarsius_lariang.k141_1780720                                5794 1 +      6850 T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5845 1 +     20590 T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352050 1 - 186847797 t
i Theropithecus_gelada.CM009954.1                        I 6 C 0
s Trachypithecus_auratus.k141_1189070                        19724 1 +     26378 T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32397 1 -     78344 T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19049 1 +     25722 T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27348 1 -     62838 T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27395 1 +     46913 T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8204 1 -     28527 T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29287 1 -     64340 T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27324 1 -     63452 T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8767 1 +     22490 T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2195 1 -      6147 T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9099 1 -     13050 T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254339 1 -   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         363 1 +     19340 A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
e Capromys_pilorides.CapPil_scaffold_108409                   6895 4 +      8835 I
e Chinchilla_lanigera.JH722012.1                           1237447 4 -   2543920 I
e Nannospalax_galili.KL204047.1                             944934 5 +   3037898 I
e Dasyprocta_punctata.DasPun_flattened_line_15900            26670 4 +     75252 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23238 4 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     30928 4 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005         546 4 +      9367 I
e Octodon_degus.JH651603.1                                11053103 4 -  11899542 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70354 4 +    143317 I
e Heterocephalus_glaber.JH602082.1                         1926085 4 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  8936 4 +     14636 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   4125 5 -     10735 I
e Dipodomys_ordii.KN672350.1                              18949178 5 -  37912305 I
e Dinomys_branickii.DinBra_scaffold_10381                    97482 4 -    115145 I
e Cuniculus_paca.CunPac_flattened_line_7025                   2913 4 +     36344 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  16435 4 +     50838 I
e Cavia_tschudii.CavTsc_scaffold_23560                       61510 4 -     66877 I
e Cavia_porcellus.DS562891.1                               4998409 4 +  23407841 I
e Cavia_aperea.AVPZ01000300.1                              4994967 4 +  23392119 I
e Microgale_talazaci.MicTal_scaffold_6613                    44260 4 +    145209 I
e Echinops_telfairi.JH980293.1                            62853191 4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              12494 4 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9107394 4 -  10337057 I
e Desmodus_rotundus.KZ672289.1                            11863560 8 -  20541912 I
e Perodicticus_potto.k141_1854441                            17193 0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          24825 0 +     31479 C
e Otolemur_garnettii.GL873799.1                             351548 0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        38545 0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563384 0 - 199412804 C
e Nycticebus_coucang.k141_3846325                             1903 0 -      3937 C
e Nycticebus_bengalensis.LG01                             93635145 0 + 196305487 C
e Loris_tardigradus.ctg83                                  5042810 0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            9149 0 +     19643 C
e Galagoides_demidoff.k141_561628                            18988 0 -     32986 C
e Galago_senegalensis.k141_991736                             6937 0 +     22493 C
e Galago_moholi.ctg3793                                     123392 0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            604571 4 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_70559                 12995 4 +     15858 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   18713 4 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2109022 4 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            11679 4 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     16721 4 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_170178               4111 8 +      5315 I
e Tupaia_tana.TupTan_flattened_line_394                       7055 2 -     70247 I
e Tupaia_chinensis.KB320699.1                              1832735 2 -   4065304 I
e Zalophus_californianus.ZalCal_flattened_line_17732         27792 8 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                103891 8 -    112863 I
e Ursus_maritimus.KK499267.1                                180752 8 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              5573 8 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3582 13 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        38169 8 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1450594 8 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                197123 8 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11467998 8 -  31847680 I
e Mustela_putorius.JH418006.1                             14354015 13 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         7403 8 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             24868 227 -     74585 I
e Lycaon_pictus.CM007581.1                                41613530 8 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        812395 8 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24914979 13 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45105956 8 -  63665305 I
e Canis_lupus_familiaris.chr16                            41614375 8 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          221240 8 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     7897 8 -     23171 I
e CanFam4.chr16                                           42504261 8 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  3818 8 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            214556 8 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20414246 8 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_230229                      2269 4 +      2695 I
e Xerus_inauris.XerIna_scaffold_2302                        172995 4 -    224448 I
e Vicugna_pacos.KN270157.1                                   75231 7 +   5488506 I
e Varecia_variegata.k141_289850                              23052 0 -    147434 C
e Varecia_rubra.k141_787544                                  24145 0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    1355 4 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17360156 6 -  33153633 I
e Trichechus_manatus.JH594705.1                            6479338 4 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172227 4 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    478569 8 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    104451 8 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      190499 8 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                1589 4 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                12523 8 +     22964 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             123817 8 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1867217 4 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1857214 4 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    48093 6 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    114898 4 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6611 4 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73714 7 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2913686 7 +   3329780 I
e Rattus_norvegicus.chr16                                 37021383 6 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51958 2 +     55069 I
e Puma_concolor.QAVW01001104.1                            18097980 8 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3536301 7 -   4952924 I
e Pteropus_alecto.KB030862.1                               5839792 7 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            50543 8 -     66298 I
e Psammomys_obesus.NESX01036366.1                            35484 6 +     52041 I
e Propithecus_verreauxi.k141_1047036                          7170 0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       93533 0 -     98465 C
e Propithecus_perrieri.k141_1496898                          33262 0 +     46564 C
e Propithecus_edwardsi.k141_635656                            6937 0 -     30655 C
e Propithecus_diadema.k141_153680                             3201 0 -     11706 C
e Propithecus_coronatus.k141_209299                           2604 0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1564968 0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1981501 0 +   4620579 C
e Platanista_gangetica.PlaMin_flattened_line_167872           3361 8 -      8168 I
e Pithecia_albicans.k141_1239476                             63783 0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             2137 8 +     22231 I
e Piliocolobus_tephrosceles.PDMG02000141.1                  253151 0 +  14605196 C
e Piliocolobus_kirkii.k141_1310104                            1487 0 +     40849 C
e Piliocolobus_gordonorum.k141_381342                          898 0 -     89929 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              11277 8 -     15039 I
e Peromyscus_maniculatus.KI615324.1                         245685 6 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13979 8 +     78924 I
e Papio_kindae.k141_2214839                                  21179 0 -     27687 C
e Pantholops_hodgsonii.KE114653.1                          1614461 4 +   2937107 I
e Panthera_tigris.KE722367.1                               3971386 8 +   8748460 I
e Panthera_pardus.KV860321.1                              18460666 8 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   23340 8 -    230217 I
e Pan_troglodytes.CM009242.2                               1471732 0 - 189151597 C
e Ovis_canadensis.OviCan_scaffold_67953                       3538 4 +     17875 I
e Ovis_aries.CM001607.2                                   26403019 4 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107102557 4 - 174332312 I
e Orcinus_orca.KB316932.1                                  8095419 8 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    2464 6 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    91605 6 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          13029 4 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         435037 4 -    630418 I
e Ochotona_princeps.JH802162.1                             2550085 4 -   3988456 I
e Noctilio_leporinus.NocLep_scaffold_7894                   126448 8 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226149 8 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118473 4 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                          594 8 +     18357 I
e Myotis_lucifugus.GL429869.1                               381764 8 +   4330536 I
e Myotis_davidii.KB100139.1                                4385945 8 +   6019432 I
e Myotis_brandtii.KE162005.1                               9791585 8 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             81645 4 -     86153 I
e Mus_spretus.CM004101.1                                  39495458 6 + 130317789 I
e Mus_pahari.LT608297.1                                   58216025 6 +  89631738 I
e Mus_musculus.chr8                                       41686138 6 + 129401213 I
e Mus_caroli.LT608237.1                                   35591780 6 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          37536 8 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   17410 8 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  23194 4 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 177661 8 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351980 8 +    437263 I
e Mirza_zaza.k141_766280                                     51274 0 -     62432 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             40499 8 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6361598 8 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15961246 6 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                183501 8 +    200668 I
e Microcebus_murinus.CM007674.1                           74983485 0 +  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     80090 8 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17428110 6 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 47911 6 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       149267 8 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7499859 4 +  40650429 I
e Manis_pentadactyla.KN006162.1                             219708 8 +    317179 I
e Manis_javanica.JSZB01003497.1                             672421 8 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                222107 7 -    270270 I
e Macaca_silenus.Contig273                                  269932 13 +    668171 I
e Macaca_maura.k141_1103459                                  44957 3 +     51645 I
e Macaca_leonina.k141_321385                                 35202 14 -     50087 I
e Loxodonta_africana.GL010049.1                           39079878 4 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             333544 8 +    662738 I
e Lepilemur_septentrionalis.k141_360456                       7881 0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          7881 0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              7871 0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          7875 0 +     29618 C
e Lemur_catta.scaffold_24                                 14758346 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    61054 8 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64505 6 -     97402 I
e Jaculus_jaculus.JH725527.1                               1238021 4 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                2024 8 -     16823 I
e Indri_indri.k141_2415743                                    1207 0 +     11955 C
e Ictidomys_tridecemlineatus.JH393364.1                     385638 4 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       3032 4 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  68576 8 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_23202               49669 7 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6500 8 -     36432 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7899 4 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                29657 8 -    327341 I
e Hapalemur_occidentalis.k141_578367                         15697 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          8697 0 -     42923 C
e Hapalemur_griseus.k141_763500                              59824 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             34955 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          13553 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_10447                     562 4 -     78134 I
e Gorilla_beringei.k141_3358147                               4692 0 -      8343 C
e Glis_glis.GliGli_scaffold_33859                            33065 4 -     36801 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90145 4 -     95226 I
e Galeopterus_variegatus.GalVar_scaffold_74466               17944 4 +     18121 I
e Felis_nigripes.FelNig_flattened_line_31944                 26519 8 -     30238 I
e Felis_catus_fca126.CM031415.1                          185115417 8 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              57870 0 -    111500 C
e Eulemur_rufus.k141_514691                                  41466 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            3745 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 47020 0 -     97555 C
e Eulemur_macaco.k141_1562045                                22826 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 52193 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             41871 0 +     68309 C
e Eulemur_coronatus.k141_384460                              85298 0 +    112731 C
e Eulemur_collaris.k141_601111                               41336 0 -     70999 C
e Eulemur_albifrons.k141_51491                               13628 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             4004 8 +      7672 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           63787 8 -    133382 I
e Equus_przewalskii.KK951119.1                              410751 0 -    498745 C
e Equus_caballus.CM000403.2                               21373965 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041 0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12577188 8 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           11809 6 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          29834 6 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238466 4 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               5142 7 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  138124 8 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  663338 8 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18624237 8 -  35494412 I
e Daubentonia_madagascariensis.ctg71                        291455 0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    643803 4 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              3180 8 +     87169 I
e Cricetulus_griseus.LT883664.1                          213113559 6 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 41111 6 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          1682 4 -      8242 I
e Condylura_cristata.JH655891.1                           35806108 4 +  53390261 I
e Cheirogaleus_medius.k141_759766                             4020 0 -     15404 C
e Cheirogaleus_major.k141_666340                             29503 0 -     33796 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17880 8 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75571 2698 -    217609 I
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Capra_hircus.CM004588.1                                 26590065 4 +  44709034 I
e Capra_aegagrus.CM003241.1                               27407792 4 -  46296322 I
e Camelus_ferus.KB017975.1                                 1207843 7 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4664183 7 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7629897 7 +  17673402 I
e Cacajao_melanocephalus.k141_619699                         19525 0 +    119600 C
e Cacajao_hosomi.k141_81245                                  19612 0 +     95584 C
e Cacajao_calvus.k141_89051                                  42086 0 -     91139 C
e Cacajao_ayresi.k141_96119                                   6792 0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1528726 4 -   4408762 I
e Bos_taurus.CM000203.6                                   27543702 4 -  45695690 I
e Bos_mutus.JH880303.1                                      753563 4 +   1948126 I
e Bos_indicus.CM003047.1                                  20354995 4 +  48749331 I
e Bison_bison.KN261452.1                                     20608 4 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     85075 4 +    124022 I
e Balaenoptera_bonaerensis.DF507193.1                         3117 8 -      4711 I
e Balaenoptera_acutorostrata.KI537508.1                    7955908 8 -  23207421 I
e Avahi_peyrierasi.k141_1823318                               5090 0 -     19611 C
e Avahi_laniger.k141_2756659                                  5084 0 +     11645 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      14876 1 -     32367 I
e Aotus_vociferans.k141_944972                                8126 0 +      8415 C
e Aotus_trivirgatus.k141_192090                              22990 0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                671348 0 +   5030052 C
e Aotus_griseimembra.k141_982342                             43335 0 +     43593 C
e Aotus_azarae.k141_118258                                   49582 0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49179 4 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      175530 8 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1584080 4 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    16837 4 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     18798 6 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           811719 8 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4386 2 +     36723 TT
s Acomys_cahirinus.AcoCah_scaffold_21377                     18804 1 +     63021 -A
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 6 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16841 1 -     61208 -A
i Allactaga_bullata.AllBul_scaffold_20030                I 4 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46700 2 +     53615 TT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42649 2 +     44087 TT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15286 2 -     21945 TT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16959 2 +     32033 TT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71143 2 -     84148 TT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43382 2 -     78289 TT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42821 2 +     55831 TT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41272 1 -     64179 T-
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22911 1 -     24835 T-
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39897 1 +     45454 T-
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45542 2 +     70886 TT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7719 1 +     30854 T-
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31855 1 +     42133 T-
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14877 1 -     32367 -A
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 1 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273605 2 +  21539123 TT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9773 2 +     48076 TT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4910 2 -     28759 TT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32462 2 +     44353 TT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47833 2 -     71267 TT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21892 2 -     33135 TT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5084 1 +     11645 -A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5090 1 -     19611 -A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   6792 2 +     28062 TT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42086 2 -     91139 TT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19612 2 +     95584 TT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19525 2 +    119600 TT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9079 1 +     18648 -T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8618 1 -     13885 -T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             686 1 -      8861 -T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453079 1 + 189096842 -T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                601 1 +      8664 -T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_108409                   6899 1 +      8835 -G
i Capromys_pilorides.CapPil_scaffold_108409              I 4 C 0
s Carlito_syrichta.NW_007259797.1                           269169 2 +    496798 AA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994971 1 +  23392119 -g
i Cavia_aperea.AVPZ01000300.1                            I 4 C 0
s Cavia_porcellus.DS562891.1                               4998413 1 +  23407841 -g
i Cavia_porcellus.DS562891.1                             I 4 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61514 1 -     66877 -G
i Cavia_tschudii.CavTsc_scaffold_23560                   I 4 C 0
s Cebuella_niveiventris.k141_592277                           3997 1 -     12580 -T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42054 1 +     53515 -T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369986 1 -  26074798 T-
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6875 1 -     34880 T-
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65970 1 -     89041 T-
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1100 2 -      5494 AA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                139882 2 -   4669795 tt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43624 2 +     47900 TT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43451 2 -     44860 TT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43437 2 -    148725 TT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25655 2 -     40656 AA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5624 2 +     20796 TT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10698 2 -     17524 TT
i Cercopithecus_diana.k141_132293                        I 3 C 0
s Cercopithecus_hamlyni.k141_566925                          26420 2 -     34525 TT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10245 1 -     25376 T-
i Cercopithecus_lowei.k141_2101310                       C 0 I 5
s Cercopithecus_albogularis.ctg5                                  362841 2 -  39242232 TA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268552 2 +  21565898 TT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30886 2 -     45857 TT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25829 2 -     32606 TT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         1985 2 +      8499 TT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24382 2 +     70610 TT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21312 2 +     36323 TT
i Cercopithecus_roloway.k141_3012935                     I 3 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11683 1 -     19938 -A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 4 C 0
s Cheirogaleus_major.k141_666340                             29503 1 -     33796 -A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4020 1 -     15404 -A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7877 2 -     32913 TT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18290 2 -     40346 TT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18545 2 +    216457 TT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18338 2 +     39636 TT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237451 1 -   2543920 -G
i Chinchilla_lanigera.JH722012.1                         I 4 C 0
s Chiropotes_albinasus.k141_1946120                           2926 2 +      5346 TT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41421 2 -    112038 TT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6992 2 +     34062 TT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342202 2 +  18827391 TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8749 2 -     44032 TT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303527 2 - 135778131 tt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 12999 1 +     15858 -C
i Choloepus_didactylus.ChoDid_scaffold_70559             I 4 C 0
s Choloepus_hoffmanni.KN194906.1                            604575 1 -    839153 -c
i Choloepus_hoffmanni.KN194906.1                         I 4 C 0
s Colobus_angolensis.KN981557.1                             407975 2 -   2368649 tt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377850 2 - 200372422 TT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1399 2 -     84244 TT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41117 1 -     83289 -A
i Cricetomys_gambianus.CriGam_scaffold_14425             I 6 C 0
s Cricetulus_griseus.LT883664.1                          213113565 1 - 224834208 -A
i Cricetulus_griseus.LT883664.1                          I 6 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643807 1 -   1526836 -G
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 4 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16439 1 +     50838 -G
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 4 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2917 1 +     36344 -G
i Cuniculus_paca.CunPac_flattened_line_7025              I 4 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26674 1 +     75252 -G
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 4 C 0
s Dasypus_novemcinctus.JH564415.1                          2109026 1 -   2246927 -a
i Dasypus_novemcinctus.JH564415.1                        I 4 C 0
s Daubentonia_madagascariensis.ctg71                        291455 1 +  12879189 -A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97486 1 -    115145 -G
i Dinomys_branickii.DinBra_scaffold_10381                I 4 C 0
s Dipodomys_ordii.KN672350.1                              18949183 1 -  37912305 -a
i Dipodomys_ordii.KN672350.1                             I 5 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4130 1 -     10735 -A
i Dipodomys_stephensi.DipSte_scaffold_89095              I 5 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8940 1 +     14636 -G
i Dolichotis_patagonum.DolPat_scaffold_80628             I 4 C 0
s Elephantulus_edwardii.JH947257.1                         9107398 1 -  10337057 -a
i Elephantulus_edwardii.JH947257.1                       I 4 I 10
s Ellobius_lutescens.LOEQ01008920.1                          29840 1 +    110024 -a
i Ellobius_lutescens.LOEQ01008920.1                      I 6 C 0
s Ellobius_talpinus.LOJH01026522.1                           11815 1 +     18970 -a
i Ellobius_talpinus.LOJH01026522.1                       I 6 C 0
s Erythrocebus_patas.Contig38                               261730 2 +  21539334 TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13628 1 -     24895 -A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41336 1 -     70999 -A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85298 1 +    112731 -A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41871 1 +     68309 -A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52193 1 -     65740 -A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22826 1 -     75513 -A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47020 1 -     97555 -A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3745 1 +     30972 -A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41466 1 -     52037 -A
i Eulemur_rufus.k141_514691                              C 0 I 1
s Eulemur_sanfordi.k141_1122526                              57870 1 -    111500 -A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg3793                                     123392 1 -    137831 -A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6937 1 +     22493 -A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18988 1 -     32986 -A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17948 1 +     18121 -A
i Galeopterus_variegatus.GalVar_scaffold_74466           I 4 C 0
s Glis_glis.GliGli_scaffold_33859                            33069 1 -     36801 -A
i Glis_glis.GliGli_scaffold_33859                        I 4 C 0
s Gorilla_gorilla.LT578336.1                                 70185 2 +  33314783 tt
i Gorilla_gorilla.LT578336.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     566 1 -     78134 -A
i Graphiurus_murinus.GraMur_scaffold_10447               I 4 C 0
s Hapalemur_alaotrensis.k141_330369                          13553 1 -     40692 -A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34955 1 +     49394 -A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59824 1 -     66874 -A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8697 1 -     42923 -A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15697 1 -     53142 -A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1926089 1 -  22651954 -a
i Heterocephalus_glaber.JH602082.1                       I 4 C 0
s Hoolock_leuconedys.ctg274                                    141708 2 -    630532 TG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70358 1 +    143317 -G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 4 C 0
s Hylobates_agilis.k141_1155965                               4743 2 +     12352 TG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11927 2 +     55766 TG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051525 2 + 191637585 TG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800403 2 +  11177569 TG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3036 1 -    135385 -G
i Hystrix_cristata.HysCri_scaffold_5660                  I 4 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385642 1 +   7955117 -A
i Ictidomys_tridecemlineatus.JH393364.1                  I 4 C 0
s Indri_indri.k141_2415743                                    1207 1 +     11955 -A
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238025 1 +   9596543 -A
i Jaculus_jaculus.JH725527.1                             I 4 C 0
s Lagothrix_lagothricha.k141_246028                          42149 2 +    110728 CT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14758346 1 +  30322482 -A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3063 1 -     13097 -T
i Leontocebus_fuscicollis.k141_2994775                   C 0 I 2
s Leontocebus_illigeri.k141_2951200                           2817 1 +      5940 -T
i Leontocebus_illigeri.k141_2951200                      C 0 I 2
s Leontocebus_nigricollis.k141_3905062                        2647 1 -      5717 -T
i Leontocebus_nigricollis.k141_3905062                   C 0 I 2
s Leontopithecus_chrysomelas.k141_1327670                     9014 1 -     11567 -T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10395 1 -     12945 -T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7875 1 +     29618 -A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7871 1 +     31569 -A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7881 1 +     24756 -A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7881 1 +     16388 -A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16725 1 +     24238 -A
i Lepus_americanus.LepAme_scaffold_56121                 I 4 C 0
s Lophocebus_aterrimus.ctg367                               331840 2 -   1826925 TT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9149 1 +     19643 -A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042810 1 -   6120653 -A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079882 1 +  43346337 -A
i Loxodonta_africana.GL010049.1                          I 4 C 0
s Macaca_arctoides.k141_1757516                              44157 1 -     61512 A-
i Macaca_arctoides.k141_1757516                          C 0 I 4
s Macaca_assamensis.Contig5                                 371819 1 -  60120075 T-
i Macaca_assamensis.Contig5                              C 0 I 4
s Macaca_cyclopis.k119_263443                                24077 2 +     30207 TT
i Macaca_cyclopis.k119_263443                            I 2 C 0
s Macaca_fascicularis.k141_1397292                           21180 2 -     24934 TT
i Macaca_fascicularis.k141_1397292                       I 2 C 0
s Macaca_fuscata.k119_546792                                 24030 2 +     30527 TT
i Macaca_fuscata.k119_546792                             I 2 C 0
s Macaca_mulatta.NC_041758.1                                414153 2 - 187317192 tt
i Macaca_mulatta.NC_041758.1                             I 2 C 0
s Macaca_nemestrina.KQ007038.1                              398383 2 +  25927173 tt
i Macaca_nemestrina.KQ007038.1                           I 2 C 0
s Macaca_nigra.k141_2818840                                  47555 2 -     62418 TT
i Macaca_nigra.k141_2818840                              I 2 C 0
s Macaca_radiata.k141_3557992                                24208 1 +     24253 T-
i Macaca_radiata.k141_3557992                            C 0 I 4
s Macaca_siberu.k141_2185972                                 44027 2 +     59329 TT
i Macaca_siberu.k141_2185972                             I 2 C 0
s Macaca_thibetana.k99_503078                                  216 1 +      1732 T-
i Macaca_thibetana.k99_503078                            C 0 I 4
s Macaca_tonkeana.k141_339739                                 1733 2 +     17132 TT
i Macaca_tonkeana.k141_339739                            I 2 C 0
s Mandrillus_leucophaeus.scaffold280                        321231 2 +  24302211 TT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356063 2 -    752769 TT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499863 1 +  40650429 -A
i Marmota_marmota.CZRN01000018.1                         I 4 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47917 1 -    140813 -A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 6 C 0
s Mesocricetus_auratus.KB708134.1                         17428116 1 +  29670104 -A
i Mesocricetus_auratus.KB708134.1                        I 6 C 0
s Mico_argentatus.k141_582562                                 9189 1 +     17804 -T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9691 1 -     12984 -T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18005 1 -     26561 -T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983485 1 +  93316391 -a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961252 1 +  27267610 -a
i Microtus_ochrogaster.CM001695.1                        I 6 C 0
s Miopithecus_ogouensis.k141_1534655                         21241 2 -     27822 TT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     51274 1 -     62432 -A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mus_caroli.LT608237.1                                   35591786 1 + 120012414 -a
i Mus_caroli.LT608237.1                                  I 6 C 0
s Mus_musculus.chr8                                       41686144 1 + 129401213 -a
i Mus_musculus.chr8                                      I 6 C 0
s Mus_pahari.LT608297.1                                   58216031 1 +  89631738 -a
i Mus_pahari.LT608297.1                                  I 6 C 0
s Mus_spretus.CM004101.1                                  39495464 1 + 130317789 -a
i Mus_spretus.CM004101.1                                 I 6 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81649 1 -     86153 -A
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 4 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118477 1 +    130748 -A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 4 C 0
s Nannospalax_galili.KL204047.1                             944939 1 +   3037898 -G
i Nannospalax_galili.KL204047.1                          I 5 C 0
s Nasalis_larvatus.k141_1350636                              27898 2 +     34575 AA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           52635 2 -    132029 TG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8730 2 -     16345 TG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14615 2 +     22201 TG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412836 2 -  22158432 TG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25013 2 -     54323 TG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93635145 1 + 196305487 -A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1903 1 -      3937 -A
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563384 1 - 199412804 -A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550089 1 -   3988456 -a
i Ochotona_princeps.JH802162.1                           I 4 I 1
s Octodon_degus.JH651603.1                                11053107 1 -  11899542 -G
i Octodon_degus.JH651603.1                               I 4 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91611 1 -    140218 -A
i Ondatra_zibethicus.OndZib_scaffold_7387                I 6 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2470 1 -     41509 -A
i Onychomys_torridus.OnyTor_scaffold_28377               I 6 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12498 1 -     14239 -A
i Orycteropus_afer.OryAfe_flattened_line_171931          I 4 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102561 1 - 174332312 -c
i Oryctolagus_cuniculus.CM000791.1                       I 4 C 0
s Otolemur_crassicaudatus.k141_649260                        38545 1 -     51505 -A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351548 1 +   1103335 -a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Papio_anubis.CM001495.2                                   242067 2 - 183742232 tt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8529 2 +     21308 TT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291103 2 -  20919399 TT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_papio.k141_799093                                    14323 2 +     16796 TT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21132 2 -     23640 TT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24825 1 +     31479 -A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17193 1 -     24908 -A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         550 1 +      9367 -A
i Perognathus_longimembris.PerPac_flattened_line_89005   I 4 C 0
s Peromyscus_maniculatus.KI615324.1                         245691 1 +  18517816 -a
i Peromyscus_maniculatus.KI615324.1                      I 6 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30932 1 -     56120 -T
i Petromus_typicus.PetTyp_scaffold_17301                 I 4 C 0
s Piliocolobus_badius.k141_2704958                            1347 2 +     55023 TT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          898 1 -     89929 -T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1487 1 +     40849 -T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253151 1 +  14605196 -t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             63783 2 +    207309 TT
i Pithecia_albicans.k141_1239476                         C 0 I 2
s Pithecia_chrysocephala.k141_785207                          4878 2 -     25401 TT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30619 2 +     58159 TT
i Pithecia_hirsuta.k141_640380                           C 0 I 2
s Pithecia_mittermeieri.k141_1280039                         30895 2 +     63561 TT
i Pithecia_mittermeieri.k141_1280039                     C 0 I 2
s Pithecia_pissinattii.k141_878371                           30655 2 +     51148 TT
i Pithecia_pissinattii.k141_878371                       C 0 I 2
s Pithecia_pithecia.tarseq_165                              555625 2 -   4542175 TT
i Pithecia_pithecia.tarseq_165                           C 0 I 2
s Pithecia_vanzolinii.k141_1369553                           30639 2 +     51125 TT
i Pithecia_vanzolinii.k141_1369553                       C 0 I 2
s Plecturocebus_bernhardi.k141_2549090                        7045 2 +     39866 TT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2130 2 -      9282 TT
i Plecturocebus_brunneus.k141_862875                     C 0 I 1
s Plecturocebus_caligatus.k141_1382851                       41533 2 -     87950 TT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41927 2 -     88961 TT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6625 2 -     39403 TT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41578 2 +     87928 TT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6622 2 -     60166 TT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13559 2 -     67232 TT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41475 2 -     90634 TT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42942 2 +     89403 TT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176853 2 - 189387572 tt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191670 2 -   9816681 TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26481 2 +     69807 TA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43677 2 -     80239 TT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981501 1 +   4620579 -a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564968 1 -   2598838 -A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2604 1 -      7103 -A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3201 1 -     11706 -A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6937 1 -     30655 -A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33262 1 +     46564 -A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93533 1 -     98465 -A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7170 1 +     35169 -A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            35490 1 +     52041 -a
i Psammomys_obesus.NESX01036366.1                        I 6 C 0
s Pygathrix_cinerea.k141_1153803                             25855 2 +     91421 AA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152352 2 -   7812017 AA
i Pygathrix_nigripes_b.ctg100                               I 4 C 0
s Pygathrix_nigripes_a.k141_215492                              6725 2 +     72585 AA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021389 1 -  90668790 -a
i Rattus_norvegicus.chr16                                I 6 C 0
s Rhinopithecus_bieti.k119_778604                              427 2 +      7119 AA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121035 2 + 195417433 aa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235277 2 -   7961872 AA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               2923 1 +     27962 -T
i Saguinus_bicolor.k141_1429097                          C 0 I 2
s Saguinus_geoffroyi.k141_3779887                             2818 1 +      6077 -T
i Saguinus_geoffroyi.k141_3779887                        C 0 I 2
s Saguinus_imperator.k141_1898058                             2909 1 +      5971 -T
i Saguinus_imperator.k141_1898058                        C 0 I 2
s Saguinus_inustus.k141_2469308                               2831 1 +      5932 -T
i Saguinus_inustus.k141_2469308                          C 0 I 2
s Saguinus_labiatus.k141_2380921                              1173 1 -      4390 -T
i Saguinus_labiatus.k141_2380921                         C 0 I 2
s Saguinus_midas.LG03                                       390608 1 - 209938924 -T
i Saguinus_midas.LG03                                    C 0 I 2
s Saguinus_mystax.k141_8077960                                2780 1 +      5979 -T
i Saguinus_mystax.k141_8077960                           C 0 I 2
s Saguinus_oedipus.k141_1466288                               3542 1 -      4301 -T
i Saguinus_oedipus.k141_1466288                          C 0 I 2
s Saimiri_boliviensis.NW_024100920.1                       1107950 2 + 121099817 tt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29511 2 -     47369 TT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29899 2 -     79414 TT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26591 1 -     34454 -T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13997 2 -     22428 TT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29143 2 -     47109 TT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237203 2 +   5703754 TT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6793 2 +     21866 TT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         24174 2 +     27374 TA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27688 2 +     58920 TA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14184 2 -     45317 TA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21843 2 -     42441 TA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24523 2 -     29113 TT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27595 2 -     48123 AA
i Semnopithecus_vetulus.k141_244474                      I 3 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48099 1 +     77746 -A
i Sigmodon_hispidus.SigHis_scaffold_20193                I 6 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857218 1 -   1910179 -A
i Solenodon_paradoxus.SolPar_flattened_line_126          I 4 C 0
s Spermophilus_dauricus.KZ294078.1                         1867221 1 +   3870691 -A
i Spermophilus_dauricus.KZ294078.1                       I 4 C 0
s Symphalangus_syndactylus.tarseq_199                       390097 2 +   1523678 TG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1593 1 +      5583 -A
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 4 C 0
s Tarsius_lariang.k141_1780720                                5795 2 +      6850 AA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5846 2 +     20590 AA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352051 2 - 186847797 tt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23242 1 -     33621 -t
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 4 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18717 1 -     31044 -A
i Tolypeutes_matacus.TolMat_scaffold_31955               I 4 C 0
s Trachypithecus_auratus.k141_1189070                        19725 2 +     26378 AA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32398 2 -     78344 AA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19050 2 +     25722 AA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27349 2 -     62838 AA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27396 2 +     46913 AA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8205 2 -     28527 AA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29288 2 -     64340 AA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27325 2 -     63452 AA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8768 2 +     22490 AA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2196 2 -      6147 AA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9100 2 -     13050 TA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254340 2 -   6242583 AA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         364 2 +     19340 AA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Trichechus_manatus.JH594705.1                            6479342 1 -  10818551 -a
i Trichechus_manatus.JH594705.1                          I 4 C 0
s Tupaia_chinensis.KB320699.1                              1832737 1 -   4065304 -A
i Tupaia_chinensis.KB320699.1                            I 2 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7057 1 -     70247 -A
i Tupaia_tana.TupTan_flattened_line_394                  I 2 C 0
s Varecia_rubra.k141_787544                                  24145 1 -     30710 -A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23052 1 -    147434 -A
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        172999 1 -    224448 -A
i Xerus_inauris.XerIna_scaffold_2302                     I 4 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2273 1 +      2695 -A
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 4 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    44260 4 +    145209 I
e Echinops_telfairi.JH980293.1                            62853191 4 - 111700974 I
e Desmodus_rotundus.KZ672289.1                            11863560 8 -  20541912 I
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Carollia_perspicillata.CarPer_scaffold_170178               4111 8 +      5315 I
e Zalophus_californianus.ZalCal_flattened_line_17732         27792 8 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                103891 8 -    112863 I
e Ursus_maritimus.KK499267.1                                180752 8 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              5573 8 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3582 13 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        38169 8 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1450594 8 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                197123 8 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11467998 8 -  31847680 I
e Mustela_putorius.JH418006.1                             14354015 13 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         7403 8 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             24868 227 -     74585 I
e Lycaon_pictus.CM007581.1                                41613530 8 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        812395 8 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24914979 13 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45105956 8 -  63665305 I
e Canis_lupus_familiaris.chr16                            41614375 8 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          221240 8 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     7897 8 -     23171 I
e CanFam4.chr16                                           42504261 8 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  3818 8 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            214556 8 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20414246 8 +  29979442 I
e Vicugna_pacos.KN270157.1                                   75231 7 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    1355 4 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17360156 6 -  33153633 I
e Tragulus_javanicus.TraJav_scaffold_3462                   172227 4 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    478569 8 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    104451 8 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      190499 8 +    199430 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                12523 8 +     22964 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             123817 8 +    196729 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    114898 4 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6611 4 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73714 7 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2913686 7 +   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51958 2 +     55069 I
e Puma_concolor.QAVW01001104.1                            18097980 8 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3536301 7 -   4952924 I
e Pteropus_alecto.KB030862.1                               5839792 7 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            50543 8 -     66298 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3361 8 -      8168 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             2137 8 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_46867              11277 8 -     15039 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13979 8 +     78924 I
e Papio_kindae.k141_2214839                                  21179 0 -     27687 C
e Pantholops_hodgsonii.KE114653.1                          1614461 4 +   2937107 I
e Panthera_tigris.KE722367.1                               3971386 8 +   8748460 I
e Panthera_pardus.KV860321.1                              18460666 8 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   23340 8 -    230217 I
e Pan_troglodytes.CM009242.2                               1471732 0 - 189151597 C
e Ovis_canadensis.OviCan_scaffold_67953                       3538 4 +     17875 I
e Ovis_aries.CM001607.2                                   26403019 4 -  44047080 I
e Orcinus_orca.KB316932.1                                  8095419 8 +  10937097 I
e Okapia_johnstoni.LVCL01S0005463.1                          13029 4 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         435037 4 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   126448 8 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226149 8 -   7148211 I
e Myotis_myotis.MyoMyo_scaffold_66571                          594 8 +     18357 I
e Myotis_lucifugus.GL429869.1                               381764 8 +   4330536 I
e Myotis_davidii.KB100139.1                                4385945 8 +   6019432 I
e Myotis_brandtii.KE162005.1                               9791585 8 +  10118263 I
e Murina_feae.MurFea_scaffold_17764                          37536 8 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   17410 8 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  23194 4 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 177661 8 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351980 8 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             40499 8 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6361598 8 -   8254450 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                183501 8 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     80090 8 +     93471 I
e Megaderma_lyra.MegLyr_scaffold_4542                       149267 8 +    207569 I
e Manis_pentadactyla.KN006162.1                             219708 8 +    317179 I
e Manis_javanica.JSZB01003497.1                             672421 8 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                222107 7 -    270270 I
e Macaca_silenus.Contig273                                  269932 13 +    668171 I
e Macaca_maura.k141_1103459                                  44957 3 +     51645 I
e Macaca_leonina.k141_321385                                 35202 14 -     50087 I
e Lipotes_vexillifer.KE559953.1                             333544 8 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    61054 8 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64505 6 -     97402 I
e Inia_geoffrensis.IniGeo_flattened_line_69447                2024 8 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  68576 8 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_23202               49669 7 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6500 8 -     36432 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7899 4 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                29657 8 -    327341 I
e Gorilla_beringei.k141_3358147                               4692 0 -      8343 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90145 4 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 26519 8 -     30238 I
e Felis_catus_fca126.CM031415.1                          185115417 8 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_118172             4004 8 +      7672 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           63787 8 -    133382 I
e Equus_przewalskii.KK951119.1                              410751 0 -    498745 C
e Equus_caballus.CM000403.2                               21373965 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041 0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12577188 8 +  14770903 I
e Elaphurus_davidianus.JRFZ01104969.1                       238466 4 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               5142 7 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  138124 8 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  663338 8 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18624237 8 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              3180 8 +     87169 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          1682 4 -      8242 I
e Condylura_cristata.JH655891.1                           35806108 4 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17880 8 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     75571 2698 -    217609 I
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Capra_hircus.CM004588.1                                 26590065 4 +  44709034 I
e Capra_aegagrus.CM003241.1                               27407792 4 -  46296322 I
e Camelus_ferus.KB017975.1                                 1207843 7 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4664183 7 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7629897 7 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1528726 4 -   4408762 I
e Bos_taurus.CM000203.6                                   27543702 4 -  45695690 I
e Bos_mutus.JH880303.1                                      753563 4 +   1948126 I
e Bos_indicus.CM003047.1                                  20354995 4 +  48749331 I
e Bison_bison.KN261452.1                                     20608 4 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     85075 4 +    124022 I
e Balaenoptera_bonaerensis.DF507193.1                         3117 8 -      4711 I
e Balaenoptera_acutorostrata.KI537508.1                    7955908 8 -  23207421 I
e Aotus_vociferans.k141_944972                                8126 0 +      8415 C
e Aotus_trivirgatus.k141_192090                              22990 0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                671348 0 +   5030052 C
e Aotus_griseimembra.k141_982342                             43335 0 +     43593 C
e Aotus_azarae.k141_118258                                   49582 0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49179 4 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      175530 8 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1584080 4 +   2318259 I
e Acinonyx_jubatus.LLWD01001279.1                           811719 8 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4388 1 +     36723 T
s Allenopithecus_nigroviridis.k141_3755588                   46702 1 +     53615 T
i Allenopithecus_nigroviridis.k141_3755588               C 0 I 7
s Allochrocebus_lhoesti.k141_441277                          42651 1 +     44087 T
i Allochrocebus_lhoesti.k141_441277                      C 0 I 19
s Allochrocebus_preussi.k141_1993939                         15288 1 -     21945 T
i Allochrocebus_preussi.k141_1993939                     C 0 I 7
s Allochrocebus_solatus.k141_3554717                         16961 1 +     32033 T
i Allochrocebus_solatus.k141_3554717                     C 0 I 17
s Alouatta_belzebul.k141_1011583                             71145 1 -     84148 T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43384 1 -     78289 A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42823 1 +     55831 T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41273 1 -     64179 T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22912 1 -     24835 T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39898 1 +     45454 T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45544 1 +     70886 T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7720 1 +     30854 T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31856 1 +     42133 T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273607 1 +  21539123 T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9775 1 +     48076 T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4912 1 -     28759 T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32464 1 +     44353 T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47835 1 -     71267 T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21894 1 -     33135 T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Cacajao_ayresi.k141_96119                                   6794 1 +     28062 T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42088 1 -     91139 T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19614 1 +     95584 T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19527 1 +    119600 T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9080 1 +     18648 T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8619 1 -     13885 T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             687 1 -      8861 T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453080 1 + 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                602 1 +      8664 T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Cebuella_niveiventris.k141_592277                           3998 1 -     12580 T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42055 1 +     53515 T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369987 1 -  26074798 T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6876 1 -     34880 T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65971 1 -     89041 T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cercocebus_atys.KQ010504.1                                139884 1 -   4669795 t
i Cercocebus_atys.KQ010504.1                             C 0 I 7
s Cercocebus_chrysogaster.k141_1522556                       43626 1 +     47900 T
i Cercocebus_chrysogaster.k141_1522556                   C 0 I 7
s Cercocebus_lunulatus.k141_2779015                          43453 1 -     44860 T
i Cercocebus_lunulatus.k141_2779015                      C 0 I 7
s Cercocebus_torquatus.k141_2159127                          43439 1 -    148725 T
i Cercocebus_torquatus.k141_2159127                      C 0 I 7
s Cercopithecus_ascanius.k141_3120866                        25657 1 -     40656 A
i Cercopithecus_ascanius.k141_3120866                    C 0 I 7
s Cercopithecus_cephus.k141_4183004                           5626 1 +     20796 A
i Cercopithecus_cephus.k141_4183004                      C 0 I 4
s Cercopithecus_diana.k141_132293                            10700 1 -     17524 T
i Cercopithecus_diana.k141_132293                        C 0 I 7
s Cercopithecus_hamlyni.k141_566925                          26422 1 -     34525 T
i Cercopithecus_hamlyni.k141_566925                      C 0 I 7
s Cercopithecus_albogularis.ctg5                                  362843 1 -  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 I 7
s Cercopithecus_mona.ctg39                                  268554 1 +  21565898 T
i Cercopithecus_mona.ctg39                               C 0 I 8
s Cercopithecus_neglectus.k141_858615                        30888 1 -     45857 A
i Cercopithecus_neglectus.k141_858615                    C 0 I 8
s Cercopithecus_nictitans.k141_2995370                       25831 1 -     32606 T
i Cercopithecus_nictitans.k141_2995370                   C 0 I 5
s Cercopithecus_petaurista.k141_42573                         1987 1 +      8499 T
i Cercopithecus_petaurista.k141_42573                    C 0 I 7
s Cercopithecus_pogonias.k141_6079                           24384 1 +     70610 T
i Cercopithecus_pogonias.k141_6079                       C 0 I 8
s Cercopithecus_roloway.k141_3012935                         21314 1 +     36323 T
i Cercopithecus_roloway.k141_3012935                     C 0 I 7
s Cheracebus_lucifer.k141_2312002                             7879 1 -     32913 T
i Cheracebus_lucifer.k141_2312002                        C 0 I 1
s Cheracebus_lugens.k141_1179667                             18292 1 -     40346 T
i Cheracebus_lugens.k141_1179667                         C 0 I 1
s Cheracebus_regulus.k141_471822                             18547 1 +    216457 T
i Cheracebus_regulus.k141_471822                         C 0 I 1
s Cheracebus_torquatus.k141_890198                           18340 1 +     39636 T
i Cheracebus_torquatus.k141_890198                       C 0 I 1
s Chiropotes_albinasus.k141_1946120                           2928 1 +      5346 T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41423 1 -    112038 T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6994 1 +     34062 T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342204 1 +  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 I 8
s Chlorocebus_pygerythrus.k141_3063162                        8751 1 -     44032 T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 I 7
s Chlorocebus_sabaeus.CM001947.1                            303529 1 - 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 7
s Colobus_angolensis.KN981557.1                             407977 1 -   2368649 t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377852 1 - 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1401 1 -     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                               261732 1 +  21539334 T
i Erythrocebus_patas.Contig38                            C 0 I 7
s Gorilla_gorilla.LT578336.1                                 70187 1 +  33314783 t
i Gorilla_gorilla.LT578336.1                             C 0 I 121
s Hoolock_leuconedys.ctg274                                    141710 1 -    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               4745 1 +     12352 T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11929 1 +     55766 T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051527 1 + 191637585 T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800405 1 +  11177569 T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42151 1 +    110728 T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3066 1 -     13097 A
i Leontocebus_fuscicollis.k141_2994775                   I 2 C 0
s Leontocebus_illigeri.k141_2951200                           2820 1 +      5940 A
i Leontocebus_illigeri.k141_2951200                      I 2 C 0
s Leontocebus_nigricollis.k141_3905062                        2650 1 -      5717 A
i Leontocebus_nigricollis.k141_3905062                   I 2 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9015 1 -     11567 T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10396 1 -     12945 T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               331842 1 -   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 I 5
s Macaca_cyclopis.k119_263443                                24079 1 +     30207 T
i Macaca_cyclopis.k119_263443                            C 0 I 7
s Macaca_fascicularis.k141_1397292                           21182 1 -     24934 T
i Macaca_fascicularis.k141_1397292                       C 0 I 7
s Macaca_fuscata.k119_546792                                 24032 1 +     30527 T
i Macaca_fuscata.k119_546792                             C 0 I 7
s Macaca_mulatta.NC_041758.1                                414155 1 - 187317192 t
i Macaca_mulatta.NC_041758.1                             C 0 I 7
s Macaca_nemestrina.KQ007038.1                              398385 1 +  25927173 t
i Macaca_nemestrina.KQ007038.1                           C 0 I 7
s Macaca_nigra.k141_2818840                                  47557 1 -     62418 T
i Macaca_nigra.k141_2818840                              C 0 I 7
s Macaca_siberu.k141_2185972                                 44029 1 +     59329 T
i Macaca_siberu.k141_2185972                             C 0 I 7
s Macaca_tonkeana.k141_339739                                 1735 1 +     17132 T
i Macaca_tonkeana.k141_339739                            C 0 I 7
s Mandrillus_leucophaeus.scaffold280                        321233 1 +  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 I 7
s Mandrillus_sphinx.Contig270                               356065 1 -    752769 T
i Mandrillus_sphinx.Contig270                            C 0 I 7
s Mico_argentatus.k141_582562                                 9190 1 +     17804 T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9692 1 -     12984 T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18006 1 -     26561 T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21243 1 -     27822 T
i Miopithecus_ogouensis.k141_1534655                     C 0 I 7
s Nasalis_larvatus.k141_1350636                              27900 1 +     34575 A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           52637 1 -    132029 T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8732 1 -     16345 T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14617 1 +     22201 T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412838 1 -  22158432 T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25015 1 -     54323 T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Papio_anubis.CM001495.2                                   242069 1 - 183742232 t
i Papio_anubis.CM001495.2                                C 0 I 7
s Papio_cynocephalus.k141_1507553                             8531 1 +     21308 T
i Papio_cynocephalus.k141_1507553                        C 0 I 7
s Papio_hamadryas.Contig39                                  291105 1 -  20919399 T
i Papio_hamadryas.Contig39                               C 0 I 7
s Papio_kindae.k141_2214839                                  21179 1 -     27687 T
i Papio_kindae.k141_2214839                              C 0 I 7
s Papio_papio.k141_799093                                    14325 1 +     16796 T
i Papio_papio.k141_799093                                C 0 I 7
s Papio_ursinus.k141_2278143                                 21134 1 -     23640 T
i Papio_ursinus.k141_2278143                             C 0 I 9
s Piliocolobus_badius.k141_2704958                            1349 1 +     55023 T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          899 1 -     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1488 1 +     40849 T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253152 1 +  14605196 t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             63787 1 +    207309 T
i Pithecia_albicans.k141_1239476                         I 2 C 0
s Pithecia_chrysocephala.k141_785207                          4880 1 -     25401 T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30623 1 +     58159 T
i Pithecia_hirsuta.k141_640380                           I 2 C 0
s Pithecia_mittermeieri.k141_1280039                         30899 1 +     63561 T
i Pithecia_mittermeieri.k141_1280039                     I 2 C 0
s Pithecia_pissinattii.k141_878371                           30659 1 +     51148 T
i Pithecia_pissinattii.k141_878371                       I 2 C 0
s Pithecia_pithecia.tarseq_165                              555629 1 -   4542175 T
i Pithecia_pithecia.tarseq_165                           I 2 C 0
s Pithecia_vanzolinii.k141_1369553                           30643 1 +     51125 T
i Pithecia_vanzolinii.k141_1369553                       I 2 C 0
s Plecturocebus_bernhardi.k141_2549090                        7047 1 +     39866 T
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 1
s Plecturocebus_caligatus.k141_1382851                       41535 1 -     87950 T
i Plecturocebus_caligatus.k141_1382851                   C 0 I 1
s Plecturocebus_cinerascens.k141_1164729                     41929 1 -     88961 T
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 1
s Plecturocebus_cupreus.k141_2351393                          6627 1 -     39403 T
i Plecturocebus_cupreus.k141_2351393                     C 0 I 1
s Plecturocebus_dubius.k141_1058799                          41580 1 +     87928 T
i Plecturocebus_dubius.k141_1058799                      C 0 I 1
s Plecturocebus_grovesi.k141_2013005                          6624 1 -     60166 T
i Plecturocebus_grovesi.k141_2013005                     C 0 I 1
s Plecturocebus_hoffmannsi.k141_3303950                      13561 1 -     67232 T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 1
s Plecturocebus_miltoni.k141_349282                          41477 1 -     90634 T
i Plecturocebus_miltoni.k141_349282                      C 0 I 1
s Plecturocebus_moloch.k141_1031110                          42944 1 +     89403 T
i Plecturocebus_moloch.k141_1031110                      C 0 I 1
s Pongo_abelii.CM009266.2                                   176855 1 - 189387572 t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191672 1 -   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26483 1 +     69807 A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43679 1 -     80239 A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25857 1 +     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152354 1 -   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6727 1 +     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                              429 1 +      7119 A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121037 1 + 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235279 1 -   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               2926 1 +     27962 T
i Saguinus_bicolor.k141_1429097                          I 2 C 0
s Saguinus_geoffroyi.k141_3779887                             2821 1 +      6077 T
i Saguinus_geoffroyi.k141_3779887                        I 2 C 0
s Saguinus_imperator.k141_1898058                             2912 1 +      5971 T
i Saguinus_imperator.k141_1898058                        I 2 C 0
s Saguinus_inustus.k141_2469308                               2834 1 +      5932 T
i Saguinus_inustus.k141_2469308                          I 2 C 0
s Saguinus_labiatus.k141_2380921                              1176 1 -      4390 T
i Saguinus_labiatus.k141_2380921                         I 2 C 0
s Saguinus_midas.LG03                                       390611 1 - 209938924 T
i Saguinus_midas.LG03                                    I 2 C 0
s Saguinus_mystax.k141_8077960                                2783 1 +      5979 T
i Saguinus_mystax.k141_8077960                           I 2 C 0
s Saguinus_oedipus.k141_1466288                               3545 1 -      4301 T
i Saguinus_oedipus.k141_1466288                          I 2 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107952 1 + 121099817 t
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29513 1 -     47369 T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29901 1 -     79414 T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26592 1 -     34454 T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              13999 1 -     22428 T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29145 1 -     47109 T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237205 1 +   5703754 T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6795 1 +     21866 T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         24176 1 +     27374 A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27690 1 +     58920 A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14186 1 -     45317 A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21845 1 -     42441 A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24525 1 -     29113 T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27597 1 -     48123 A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390099 1 +   1523678 T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                           352053 1 - 186847797 t
i Theropithecus_gelada.CM009954.1                        C 0 I 7
s Trachypithecus_auratus.k141_1189070                        19727 1 +     26378 A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32400 1 -     78344 A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19052 1 +     25722 A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27351 1 -     62838 A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27398 1 +     46913 A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8207 1 -     28527 A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29290 1 -     64340 A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27327 1 -     63452 A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8770 1 +     22490 A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2198 1 -      6147 A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9102 1 -     13050 A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254342 1 -   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         366 1 +     19340 A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
e Capromys_pilorides.CapPil_scaffold_108409                   6900 0 +      8835 C
e Chinchilla_lanigera.JH722012.1                           1237452 0 -   2543920 C
e Nannospalax_galili.KL204047.1                             944940 0 +   3037898 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            26675 0 +     75252 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23243 0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     30933 0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_89005         551 0 +      9367 C
e Octodon_degus.JH651603.1                                11053108 0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70359 0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1926090 0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                  8941 0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   4131 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18949184 0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    97487 0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   2918 0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  16440 0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       61515 0 -     66877 C
e Cavia_porcellus.DS562891.1                               4998414 0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4994972 0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    44260 4 +    145209 I
e Echinops_telfairi.JH980293.1                            62853191 4 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              12499 0 -     14239 C
e Elephantulus_edwardii.JH947257.1                         9107399 10 -  10337057 I
e Desmodus_rotundus.KZ672289.1                            11863560 8 -  20541912 I
e Perodicticus_potto.k141_1854441                            17194 0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          24826 0 +     31479 C
e Otolemur_garnettii.GL873799.1                             351549 0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        38546 0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563385 0 - 199412804 C
e Nycticebus_coucang.k141_3846325                             1904 0 -      3937 C
e Nycticebus_bengalensis.LG01                             93635146 0 + 196305487 C
e Loris_tardigradus.ctg83                                  5042811 0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            9150 0 +     19643 C
e Galagoides_demidoff.k141_561628                            18989 0 -     32986 C
e Galago_senegalensis.k141_991736                             6938 0 +     22493 C
e Galago_moholi.ctg3793                                     123393 0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Choloepus_hoffmanni.KN194906.1                            604576 0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_70559                 13000 0 +     15858 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   18718 0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2109027 0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            11684 0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     16726 0 +     24238 C
e Carollia_perspicillata.CarPer_scaffold_170178               4111 8 +      5315 I
e Tupaia_tana.TupTan_flattened_line_394                       7058 0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1832738 0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         27792 8 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                103891 8 -    112863 I
e Ursus_maritimus.KK499267.1                                180752 8 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              5573 8 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3582 13 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        38169 8 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1450594 8 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                197123 8 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11467998 8 -  31847680 I
e Mustela_putorius.JH418006.1                             14354015 13 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         7403 8 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             24868 227 -     74585 I
e Lycaon_pictus.CM007581.1                                41613530 8 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        812395 8 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24914979 13 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45105956 8 -  63665305 I
e Canis_lupus_familiaris.chr16                            41614375 8 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          221240 8 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     7897 8 -     23171 I
e CanFam4.chr16                                           42504261 8 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  3818 8 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            214556 8 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20414246 8 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_230229                      2274 0 +      2695 C
e Xerus_inauris.XerIna_scaffold_2302                        173000 0 -    224448 C
e Vicugna_pacos.KN270157.1                                   75231 7 +   5488506 I
e Varecia_variegata.k141_289850                              23053 0 -    147434 C
e Varecia_rubra.k141_787544                                  24146 0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    1355 4 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17360156 6 -  33153633 I
e Trichechus_manatus.JH594705.1                            6479343 0 -  10818551 C
e Tragulus_javanicus.TraJav_scaffold_3462                   172227 4 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    478569 8 -    610378 I
e Tarsius_wallacei.k141_226975                                5848 0 +     20590 C
e Tarsius_lariang.k141_1780720                                5797 0 +      6850 C
e Tapirus_terrestris.TapTer_scaffold_755                    104451 8 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      190499 8 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                1594 0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                12523 8 +     22964 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             123817 8 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1867222 0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1857219 0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    48100 0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    114898 4 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        6611 4 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73714 7 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2913686 7 +   3329780 I
e Rattus_norvegicus.chr16                                 37021390 0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29815                 51958 2 +     55069 I
e Puma_concolor.QAVW01001104.1                            18097980 8 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3536301 7 -   4952924 I
e Pteropus_alecto.KB030862.1                               5839792 7 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            50543 8 -     66298 I
e Psammomys_obesus.NESX01036366.1                            35491 0 +     52041 C
e Propithecus_verreauxi.k141_1047036                          7171 0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       93534 0 -     98465 C
e Propithecus_perrieri.k141_1496898                          33263 0 +     46564 C
e Propithecus_edwardsi.k141_635656                            6938 0 -     30655 C
e Propithecus_diadema.k141_153680                             3202 0 -     11706 C
e Propithecus_coronatus.k141_209299                           2605 0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1564969 0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1981502 0 +   4620579 C
e Plecturocebus_brunneus.k141_862875                          2132 1 -      9282 I
e Platanista_gangetica.PlaMin_flattened_line_167872           3361 8 -      8168 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             2137 8 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_46867              11277 8 -     15039 I
e Peromyscus_maniculatus.KI615324.1                         245692 0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13979 8 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1614461 4 +   2937107 I
e Panthera_tigris.KE722367.1                               3971386 8 +   8748460 I
e Panthera_pardus.KV860321.1                              18460666 8 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   23340 8 -    230217 I
e Pan_troglodytes.CM009242.2                               1471732 0 - 189151597 C
e Ovis_canadensis.OviCan_scaffold_67953                       3538 4 +     17875 I
e Ovis_aries.CM001607.2                                   26403019 4 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107102562 0 - 174332312 C
e Orcinus_orca.KB316932.1                                  8095419 8 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    2471 0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    91612 0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          13029 4 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         435037 4 -    630418 I
e Ochotona_princeps.JH802162.1                             2550090 1 -   3988456 I
e Noctilio_leporinus.NocLep_scaffold_7894                   126448 8 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1226149 8 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118478 0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_66571                          594 8 +     18357 I
e Myotis_lucifugus.GL429869.1                               381764 8 +   4330536 I
e Myotis_davidii.KB100139.1                                4385945 8 +   6019432 I
e Myotis_brandtii.KE162005.1                               9791585 8 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             81650 0 -     86153 C
e Mus_spretus.CM004101.1                                  39495465 0 + 130317789 C
e Mus_pahari.LT608297.1                                   58216032 0 +  89631738 C
e Mus_musculus.chr8                                       41686145 0 + 129401213 C
e Mus_caroli.LT608237.1                                   35591787 0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          37536 8 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   17410 8 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  23194 4 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 177661 8 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   351980 8 +    437263 I
e Mirza_zaza.k141_766280                                     51275 0 -     62432 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             40499 8 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6361598 8 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15961253 0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                183501 8 +    200668 I
e Microcebus_murinus.CM007674.1                           74983486 0 +  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     80090 8 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17428117 0 +  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 47918 0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       149267 8 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7499864 0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             219708 8 +    317179 I
e Manis_javanica.JSZB01003497.1                             672421 8 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                222107 7 -    270270 I
e Macaca_thibetana.k99_503078                                  217 4 +      1732 I
e Macaca_silenus.Contig273                                  269932 13 +    668171 I
e Macaca_radiata.k141_3557992                                24209 4 +     24253 I
e Macaca_maura.k141_1103459                                  44957 3 +     51645 I
e Macaca_leonina.k141_321385                                 35202 14 -     50087 I
e Macaca_assamensis.Contig5                                 371820 4 -  60120075 I
e Macaca_arctoides.k141_1757516                              44158 4 -     61512 I
e Loxodonta_africana.GL010049.1                           39079883 0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             333544 8 +    662738 I
e Lepilemur_septentrionalis.k141_360456                       7882 0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          7882 0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              7872 0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          7876 0 +     29618 C
e Lemur_catta.scaffold_24                                 14758347 0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    61054 8 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 64505 6 -     97402 I
e Jaculus_jaculus.JH725527.1                               1238026 0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                2024 8 -     16823 I
e Indri_indri.k141_2415743                                    1208 0 +     11955 C
e Ictidomys_tridecemlineatus.JH393364.1                     385643 0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       3037 0 -    135385 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  68576 8 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_23202               49669 7 +     49977 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6500 8 -     36432 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  7899 4 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                29657 8 -    327341 I
e Hapalemur_occidentalis.k141_578367                         15698 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                          8698 0 -     42923 C
e Hapalemur_griseus.k141_763500                              59825 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             34956 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          13554 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_10447                     567 0 -     78134 C
e Gorilla_beringei.k141_3358147                               4692 0 -      8343 C
e Glis_glis.GliGli_scaffold_33859                            33070 0 -     36801 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90145 4 -     95226 I
e Galeopterus_variegatus.GalVar_scaffold_74466               17949 0 +     18121 C
e Felis_nigripes.FelNig_flattened_line_31944                 26519 8 -     30238 I
e Felis_catus_fca126.CM031415.1                          185115417 8 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              57871 0 -    111500 C
e Eulemur_rufus.k141_514691                                  41467 1 -     52037 I
e Eulemur_rubriventer.k141_1423786                            3746 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 47021 0 -     97555 C
e Eulemur_macaco.k141_1562045                                22827 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 52194 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             41872 0 +     68309 C
e Eulemur_coronatus.k141_384460                              85299 0 +    112731 C
e Eulemur_collaris.k141_601111                               41337 0 -     70999 C
e Eulemur_albifrons.k141_51491                               13629 0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_118172             4004 8 +      7672 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           63787 8 -    133382 I
e Equus_przewalskii.KK951119.1                              410751 0 -    498745 C
e Equus_caballus.CM000403.2                               21373965 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041 0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12577188 8 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           11816 0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          29841 0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       238466 4 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               5142 7 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  138124 8 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  663338 8 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18624237 8 -  35494412 I
e Daubentonia_madagascariensis.ctg71                        291456 0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    643808 0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              3180 8 +     87169 I
e Cricetulus_griseus.LT883664.1                          213113566 0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 41118 0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          1682 4 -      8242 I
e Condylura_cristata.JH655891.1                           35806108 4 +  53390261 I
e Cheirogaleus_medius.k141_759766                             4021 0 -     15404 C
e Cheirogaleus_major.k141_666340                             29504 0 -     33796 C
e Cercopithecus_lowei.k141_2101310                           10246 5 -     25376 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17880 8 +     27315 I
e Cephalopachus_bancanus.k141_1689090                         1102 0 -      5494 C
e Catagonus_wagneri.CatWag_scaffold_2839                     75571 2698 -    217609 I
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Carlito_syrichta.NW_007259797.1                           269171 0 +    496798 C
e Capra_hircus.CM004588.1                                 26590065 4 +  44709034 I
e Capra_aegagrus.CM003241.1                               27407792 4 -  46296322 I
e Camelus_ferus.KB017975.1                                 1207843 7 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4664183 7 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7629897 7 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1528726 4 -   4408762 I
e Bos_taurus.CM000203.6                                   27543702 4 -  45695690 I
e Bos_mutus.JH880303.1                                      753563 4 +   1948126 I
e Bos_indicus.CM003047.1                                  20354995 4 +  48749331 I
e Bison_bison.KN261452.1                                     20608 4 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     85075 4 +    124022 I
e Balaenoptera_bonaerensis.DF507193.1                         3117 8 -      4711 I
e Balaenoptera_acutorostrata.KI537508.1                    7955908 8 -  23207421 I
e Avahi_peyrierasi.k141_1823318                               5091 0 -     19611 C
e Avahi_laniger.k141_2756659                                  5085 0 +     11645 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      14878 0 -     32367 C
e Aotus_vociferans.k141_944972                                8126 0 +      8415 C
e Aotus_trivirgatus.k141_192090                              22990 0 -     23494 C
e Aotus_nancymaae.KZ198451.1                                671348 0 +   5030052 C
e Aotus_griseimembra.k141_982342                             43335 0 +     43593 C
e Aotus_azarae.k141_118258                                   49582 0 -     65372 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49179 4 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      175530 8 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1584080 4 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    16842 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     18805 0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           811719 8 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4389 4 +     36723 A--A-AG
s Acinonyx_jubatus.LLWD01001279.1                           811727 1 +   1699592 ------A
i Acinonyx_jubatus.LLWD01001279.1                        I 8 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18805 4 +     63021 A--G-AG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414254 1 +  29979442 ------A
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 8 C 0
s Ailurus_fulgens.LNAC01001112.1                            214564 1 +    347723 ------A
i Ailurus_fulgens.LNAC01001112.1                         I 8 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16842 4 -     61208 A--G-AG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46710 4 +     53615 A--A-GC
i Allenopithecus_nigroviridis.k141_3755588               I 7 I 1
s Allochrocebus_lhoesti.k141_441277                          42671 4 +     44087 A--A-GC
i Allochrocebus_lhoesti.k141_441277                      I 19 I 1
s Allochrocebus_preussi.k141_1993939                         15296 4 -     21945 A--A-GC
i Allochrocebus_preussi.k141_1993939                     I 7 I 1
s Allochrocebus_solatus.k141_3554717                         16979 4 +     32033 A--A-GC
i Allochrocebus_solatus.k141_3554717                     I 17 I 1
s Alouatta_belzebul.k141_1011583                             71146 4 -     84148 A--A-AG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43385 4 -     78289 A--A-AG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42824 4 +     55831 A--A-AG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41274 4 -     64179 A--A-AG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22913 4 -     24835 A--A-AG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39899 4 +     45454 A--A-AG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45545 4 +     70886 A--A-AG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7721 4 +     30854 A--A-AG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31857 4 +     42133 A--A-AG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584084 1 +   2318259 ------g
i Ammotragus_lervia.NIVO01071767.1                       I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175538 1 -    412891 ------G
i Anoura_caudifer.AnoCau_scaffold_1412                   I 8 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49183 1 -     68529 ------G
i Antilocapra_americana.AntAmePen_scaffold_21030         I 4 I 2
s Aotus_azarae.k141_118258                                   49582 3 -     65372 ---A-AG
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43335 3 +     43593 ---A-AG
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671348 3 +   5030052 ---a-ag
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22990 3 -     23494 ---A-AG
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                8126 3 +      8415 ---A-AG
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14878 4 -     32367 A--G-AG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3826 1 -     15198 ------G
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 8 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273608 4 +  21539123 A--A-AG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9776 4 +     48076 A--A-AG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4913 4 -     28759 A--A-AG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32465 4 +     44353 A--A-AG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47836 4 -     71267 A--A-AG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21895 4 -     33135 A--A-AG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5085 4 +     11645 A--G-AG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5091 4 -     19611 A--G-AG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955916 1 -  23207421 ------G
i Balaenoptera_acutorostrata.KI537508.1                  I 8 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3125 1 -      4711 ------G
i Balaenoptera_bonaerensis.DF507193.1                    I 8 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85079 1 +    124022 ------G
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 4 C 0
s Bison_bison.KN261452.1                                     20612 1 +    288883 ------G
i Bison_bison.KN261452.1                                 I 4 C 0
s Bos_indicus.CM003047.1                                  20354999 1 +  48749331 ------G
i Bos_indicus.CM003047.1                                 I 4 C 0
s Bos_mutus.JH880303.1                                      753567 1 +   1948126 ------G
i Bos_mutus.JH880303.1                                   I 4 C 0
s Bos_taurus.CM000203.6                                   27543706 1 -  45695690 ------G
i Bos_taurus.CM000203.6                                  I 4 C 0
s Bubalus_bubalis.KI419123.1                               1528730 1 -   4408762 ------G
i Bubalus_bubalis.KI419123.1                             I 4 C 0
s Cacajao_ayresi.k141_96119                                   6795 4 +     28062 A--A-AG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42089 4 -     91139 A--A-AG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19615 4 +     95584 A--A-AG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19528 4 +    119600 A--A-AG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9081 4 +     18648 T--A-AG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8620 4 -     13885 A--A-AG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             688 4 -      8861 A--A-AG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453081 4 + 189096842 A--A-AG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                603 4 +      8664 A--A-AG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629904 1 +  17673402 ------g
i Camelus_bactrianus.KN276810.1                          I 7 C 0
s Camelus_dromedarius.KN272107.1                           4664190 1 +   7040546 ------g
i Camelus_dromedarius.KN272107.1                         I 7 C 0
s Camelus_ferus.KB017975.1                                 1207850 1 +   1652518 ------g
i Camelus_ferus.KB017975.1                               I 7 C 0
s CanFam4.chr16                                           42504269 1 +  60362399 ------A
i CanFam4.chr16                                          I 8 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7905 1 -     23171 ------A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 8 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221248 1 +   9314153 ------A
i Canis_lupus_dingo.QKWQ01000480.1                       I 8 C 0
s Canis_lupus_familiaris.chr16                            41614383 1 +  59632846 ------A
i Canis_lupus_familiaris.chr16                           I 8 C 0
s Canis_lupus_orion.HG994398.1                            45105964 1 -  63665305 ------A
i Canis_lupus_orion.HG994398.1                           I 8 C 0
s Capra_aegagrus.CM003241.1                               27407796 1 -  46296322 ------g
i Capra_aegagrus.CM003241.1                              I 4 C 0
s Capra_hircus.CM004588.1                                 26590069 1 +  44709034 ------G
i Capra_hircus.CM004588.1                                I 4 C 0
s Capromys_pilorides.CapPil_scaffold_108409                   6900 4 +      8835 A--G-AG
i Capromys_pilorides.CapPil_scaffold_108409              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269171 4 +    496798 A--G-AG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               4119 1 +      5315 ------G
i Carollia_perspicillata.CarPer_scaffold_170178          I 8 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78269 1 -    217609 ------G
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2698 C 0
s Cavia_aperea.AVPZ01000300.1                              4994972 4 +  23392119 a--g-ag
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998414 4 +  23407841 a--g-ag
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61515 4 -     66877 A--G-AG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           3999 4 -     12580 T--A-AG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42056 4 +     53515 T--A-AG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369988 4 -  26074798 A--A-AG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6877 4 -     34880 A--A-AG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65972 4 -     89041 A--A-AG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1102 4 -      5494 A--G-AG
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491055 1 -  27778364 ------G
i Ceratotherium_simum.JH767749.1                         I 8 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17888 1 +     27315 ------G
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 8 C 0
s Cercocebus_atys.KQ010504.1                                139892 5 -   4669795 a--aagc
i Cercocebus_atys.KQ010504.1                             I 7 I 1
s Cercocebus_chrysogaster.k141_1522556                       43634 5 +     47900 A--AAGC
i Cercocebus_chrysogaster.k141_1522556                   I 7 I 1
s Cercocebus_lunulatus.k141_2779015                          43461 5 -     44860 A--AAGC
i Cercocebus_lunulatus.k141_2779015                      I 7 I 1
s Cercocebus_torquatus.k141_2159127                          43447 5 -    148725 A--AAGC
i Cercocebus_torquatus.k141_2159127                      I 7 I 1
s Cercopithecus_ascanius.k141_3120866                        25665 4 -     40656 A--A-GC
i Cercopithecus_ascanius.k141_3120866                    I 7 I 1
s Cercopithecus_cephus.k141_4183004                           5631 4 +     20796 A--A-GC
i Cercopithecus_cephus.k141_4183004                      I 4 I 1
s Cercopithecus_diana.k141_132293                            10708 4 -     17524 A--A-AC
i Cercopithecus_diana.k141_132293                        I 7 I 1
s Cercopithecus_hamlyni.k141_566925                          26430 4 -     34525 A--A-GC
i Cercopithecus_hamlyni.k141_566925                      I 7 I 1
s Cercopithecus_lowei.k141_2101310                           10251 4 -     25376 A--A-AC
i Cercopithecus_lowei.k141_2101310                       I 5 I 1
s Cercopithecus_albogularis.ctg5                                  362851 4 -  39242232 A--A-GC
i Cercopithecus_albogularis.ctg5                               I 7 I 1
s Cercopithecus_mona.ctg39                                  268563 4 +  21565898 A--A-GC
i Cercopithecus_mona.ctg39                               I 8 I 1
s Cercopithecus_neglectus.k141_858615                        30897 4 -     45857 A--A-GC
i Cercopithecus_neglectus.k141_858615                    I 8 I 1
s Cercopithecus_nictitans.k141_2995370                       25837 4 -     32606 A--A-GC
i Cercopithecus_nictitans.k141_2995370                   I 5 I 1
s Cercopithecus_petaurista.k141_42573                         1995 4 +      8499 A--A-GC
i Cercopithecus_petaurista.k141_42573                    I 7 I 1
s Cercopithecus_pogonias.k141_6079                           24393 4 +     70610 A--A-GC
i Cercopithecus_pogonias.k141_6079                       I 8 I 1
s Cercopithecus_roloway.k141_3012935                         21322 4 +     36323 A--A-AC
i Cercopithecus_roloway.k141_3012935                     I 7 I 1
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11684 4 -     19938 A--G-AG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29504 4 -     33796 A--G-AG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4021 4 -     15404 A--G-AG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7881 2 -     32913 -----AG
i Cheracebus_lucifer.k141_2312002                        I 1 C 0
s Cheracebus_lugens.k141_1179667                             18294 2 -     40346 -----AG
i Cheracebus_lugens.k141_1179667                         I 1 C 0
s Cheracebus_regulus.k141_471822                             18549 2 +    216457 -----AG
i Cheracebus_regulus.k141_471822                         I 1 C 0
s Cheracebus_torquatus.k141_890198                           18342 2 +     39636 -----AG
i Cheracebus_torquatus.k141_890198                       I 1 C 0
s Chinchilla_lanigera.JH722012.1                           1237452 4 -   2543920 A--G-AG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2929 4 +      5346 A--A-AG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41424 4 -    112038 A--A-AG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6995 4 +     34062 A--A-AG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342213 4 +  18827391 A--A-GC
i Chlorocebus_aethiops.ctg25                             I 8 I 1
s Chlorocebus_pygerythrus.k141_3063162                        8759 4 -     44032 A--A-GC
i Chlorocebus_pygerythrus.k141_3063162                   I 7 I 1
s Chlorocebus_sabaeus.CM001947.1                            303537 4 - 135778131 a--a-gc
i Chlorocebus_sabaeus.CM001947.1                         I 7 I 1
s Choloepus_didactylus.ChoDid_scaffold_70559                 13000 4 +     15858 A--G-AG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            604576 4 -    839153 a--g-ag
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407978 1 -   2368649 ------t
i Colobus_angolensis.KN981557.1                          C 0 I 1
s Colobus_guereza.LG01                                      377853 1 - 200372422 ------T
i Colobus_guereza.LG01                                   C 0 I 1
s Colobus_polykomos.k141_906115                               1402 1 -     84244 ------T
i Colobus_polykomos.k141_906115                          C 0 I 1
s Condylura_cristata.JH655891.1                           35806112 1 +  53390261 ------G
i Condylura_cristata.JH655891.1                          I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1686 1 -      8242 ------G
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 4 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41118 4 -     83289 G--G-AG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113566 4 - 224834208 C--G-AC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3188 1 +     87169 ------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 8 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643808 4 -   1526836 A--G-AG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16440 4 +     50838 A--G-AA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2918 4 +     36344 A--G-AG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26675 4 +     75252 A--G-AG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109027 4 -   2246927 a--g-aa
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291456 4 +  12879189 A--G-AG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624245 1 -  35494412 ------G
i Delphinapterus_leucas.KZ290073.1                       I 8 C 0
s Desmodus_rotundus.KZ672289.1                            11863568 1 -  20541912 ------G
i Desmodus_rotundus.KZ672289.1                           I 8 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663346 1 -   1390856 ------G
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 8 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138132 1 -    198055 ------G
i Diceros_bicornis.DicBicMic_scaffold_5955               I 8 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97487 4 -    115145 A--G-AG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949184 4 -  37912305 a--a-cc
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4131 4 -     10735 A--A-CC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8941 4 +     14636 G--C-AG
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853195 4 - 111700974 g--g-gc
i Echinops_telfairi.JH980293.1                           I 4 I 424
s Eidolon_helvum.AWHC01266696.1                               5149 1 +     19438 ------g
i Eidolon_helvum.AWHC01266696.1                          I 7 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238470 1 -    607251 ------G
i Elaphurus_davidianus.JRFZ01104969.1                    I 4 I 2
s Elephantulus_edwardii.JH947257.1                         9107409 4 -  10337057 A--G-AA
i Elephantulus_edwardii.JH947257.1                       I 10 I 9
s Ellobius_lutescens.LOEQ01008920.1                          29841 4 +    110024 a--g-ag
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11816 4 +     18970 a--g-ag
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577196 1 +  14770903 ------G
i Eptesicus_fuscus.JH977646.1                            I 8 C 0
s Erythrocebus_patas.Contig38                               261740 4 +  21539334 A--A-GC
i Erythrocebus_patas.Contig38                            I 7 I 1
s Eschrichtius_robustus.EscRob_flattened_line_8968           63795 1 -    133382 ------G
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 8 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4012 1 +      7672 ------G
i Eubalaena_japonica.EubJap_flattened_line_118172        I 8 C 0
s Eulemur_albifrons.k141_51491                               13629 4 -     24895 A--G-AG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41337 5 -     70999 A-AG-AG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85299 5 +    112731 A-AG-AG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41872 1 +     68309 A------
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52194 5 -     65740 A-AG-AG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22827 1 -     75513 A------
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47021 4 -     97555 A--G-AG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3746 4 +     30972 A--G-AG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41468 2 -     52037 -----AG
i Eulemur_rufus.k141_514691                              I 1 C 0
s Felis_catus.CM001381.2                                 186245640 1 - 206538554 ------A
i Felis_catus.CM001381.2                                 I 8 C 0
s Felis_catus_fca126.CM031415.1                          185115425 1 - 205367284 ------A
i Felis_catus_fca126.CM031415.1                          I 8 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26527 1 -     30238 ------A
i Felis_nigripes.FelNig_flattened_line_31944             I 8 C 0
s Eulemur_sanfordi.k141_1122526                              57871 1 -    111500 A------
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg3793                                     123393 4 -    137831 A--G-AG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6938 4 +     22493 A--G-AG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18989 4 -     32986 A--G-AG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17949 4 +     18121 A--G-AG
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90149 1 -     95226 ------G
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 4 I 2
s Glis_glis.GliGli_scaffold_33859                            33070 4 -     36801 A--G-AG
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4692 4 -      8343 A--A-AG
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253703 4 - 186649187 a--a-ag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     567 4 -     78134 A--G-AG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13554 4 -     40692 A--G-AG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34956 4 +     49394 A--G-AG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59825 4 -     66874 A--G-AG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8698 4 -     42923 A--G-AG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15698 4 -     53142 A--G-AG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29665 1 -    327341 ------A
i Helogale_parvula.HelPar_flattened_line_2585            I 8 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7903 1 +     48891 ------G
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 4 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6508 1 -     36432 ------G
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 8 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49676 1 +     49977 ------G
i Hipposideros_galeritus.HipGal_scaffold_23202           I 7 C 0
s Heterocephalus_glaber.JH602082.1                         1926090 4 -  22651954 agAG---
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    141711 4 -    630532 A--A-AG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68584 1 +     83186 ------A
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 8 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70359 4 +    143317 A--G-AG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4746 4 +     12352 A--A-AG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11930 4 +     55766 A--A-AG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051528 4 + 191637585 A--A-AG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800406 4 +  11177569 A--A-AG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3037 4 -    135385 A--G-AA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385643 4 +   7955117 A--G-AG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 2
s Indri_indri.k141_2415743                                    1208 4 +     11955 A--G-AG
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2032 1 -     16823 ------A
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 8 C 0
s Jaculus_jaculus.JH725527.1                               1238026 4 +   9596543 A--G-AG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64511 1 -     97402 ------G
i Kogia_breviceps.KogBre_flattened_line_3970             I 6 C 0
s Lagothrix_lagothricha.k141_246028                          42152 4 +    110728 A--A-AG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61062 1 -     65777 ------G
i Lasiurus_borealis.LasBor_scaffold_16567                I 8 C 0
s Lemur_catta.scaffold_24                                 14758347 4 +  30322482 A--G-AG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3067 4 -     13097 A--A-AG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2821 4 +      5940 A--A-AG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2651 4 -      5717 A--A-AG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9016 4 -     11567 A--A-AG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10397 4 -     12945 A--A-AG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7876 4 +     29618 A--G-AG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7872 4 +     31569 A--G-AG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7882 4 +     24756 A--G-AG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7882 4 +     16388 A--G-AG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812403 1 -   3914936 ------A
i Leptonychotes_weddellii.KB714746.1                     I 8 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16726 4 +     24238 A--G-GG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333552 1 +    662738 ------G
i Lipotes_vexillifer.KE559953.1                          I 8 C 0
s Lophocebus_aterrimus.ctg367                               331848 2 -   1826925 -----GC
i Lophocebus_aterrimus.ctg367                            I 5 I 1
s Loris_lydekkerianus.k141_2031736                            9150 4 +     19643 A--G-AG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042811 4 -   6120653 A--G-AG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079883 4 +  43346337 A--G-AA
i Loxodonta_africana.GL010049.1                          C 0 I 9
s Lycaon_pictus.CM007581.1                                41613538 1 +  59628241 ------A
i Lycaon_pictus.CM007581.1                               I 8 C 0
s Macaca_arctoides.k141_1757516                              44162 4 -     61512 A--A-GC
i Macaca_arctoides.k141_1757516                          I 4 I 1
s Macaca_assamensis.Contig5                                 371824 4 -  60120075 A--A-GC
i Macaca_assamensis.Contig5                              I 4 I 1
s Macaca_cyclopis.k119_263443                                24087 4 +     30207 A--A-GC
i Macaca_cyclopis.k119_263443                            I 7 I 1
s Macaca_fascicularis.k141_1397292                           21190 4 -     24934 A--A-GC
i Macaca_fascicularis.k141_1397292                       I 7 I 1
s Macaca_fuscata.k119_546792                                 24040 4 +     30527 A--A-GC
i Macaca_fuscata.k119_546792                             I 7 I 1
s Macaca_leonina.k141_321385                                 35216 4 -     50087 A--A-GC
i Macaca_leonina.k141_321385                             I 14 I 1
s Macaca_maura.k141_1103459                                  44960 4 +     51645 A--A-GC
i Macaca_maura.k141_1103459                              I 3 I 1
s Macaca_mulatta.NC_041758.1                                414163 4 - 187317192 a--a-gc
i Macaca_mulatta.NC_041758.1                             I 7 I 1
s Macaca_nemestrina.KQ007038.1                              398393 4 +  25927173 a--a-gc
i Macaca_nemestrina.KQ007038.1                           I 7 I 1
s Macaca_nigra.k141_2818840                                  47565 4 -     62418 A--A-GC
i Macaca_nigra.k141_2818840                              I 7 I 1
s Macaca_radiata.k141_3557992                                24213 4 +     24253 A--A-TA
i Macaca_radiata.k141_3557992                            I 4 I 1
s Macaca_siberu.k141_2185972                                 44037 4 +     59329 A--A-GC
i Macaca_siberu.k141_2185972                             I 7 I 1
s Macaca_silenus.Contig273                                  269945 4 +    668171 A--A-GC
i Macaca_silenus.Contig273                               I 13 I 1
s Macaca_thibetana.k99_503078                                  221 4 +      1732 A--A-GC
i Macaca_thibetana.k99_503078                            I 4 I 1
s Macaca_tonkeana.k141_339739                                 1743 4 +     17132 A--A-GC
i Macaca_tonkeana.k141_339739                            I 7 I 1
s Macroglossus_sobrinus.MacSob_scaffold_4024                222114 1 -    270270 ------G
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 7 C 0
s Mandrillus_leucophaeus.scaffold280                        321241 5 +  24302211 A--AAGC
i Mandrillus_leucophaeus.scaffold280                     I 7 I 1
s Mandrillus_sphinx.Contig270                               356073 5 -    752769 A--AAGC
i Mandrillus_sphinx.Contig270                            I 7 I 1
s Manis_javanica.JSZB01003497.1                             672429 1 -    737560 ------G
i Manis_javanica.JSZB01003497.1                          I 8 C 0
s Manis_pentadactyla.KN006162.1                             219716 1 +    317179 ------a
i Manis_pentadactyla.KN006162.1                          I 8 C 0
s Marmota_marmota.CZRN01000018.1                           7499864 4 +  40650429 A--G-AG
i Marmota_marmota.CZRN01000018.1                         C 0 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                       149275 1 +    207569 ------G
i Megaderma_lyra.MegLyr_scaffold_4542                    I 8 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25095 1 -     74585 ------a
i Mellivora_capensis.MelCap_flattened_line_19308         I 227 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47918 4 -    140813 G--A-AG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428117 4 +  29670104 A--G-GC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80098 1 +     93471 ------G
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 8 C 0
s Mico_argentatus.k141_582562                                 9191 3 +     17804 ---A-AG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9693 3 -     12984 ---A-AG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18007 3 -     26561 ---A-AG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983486 4 +  93316391 a--g-AG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44264 4 +    145209 g--g-gc
i Microgale_talazaci.MicTal_scaffold_6613                I 4 I 400
s Micronycteris_hirsuta.MicHir_scaffold_2233                183509 1 +    200668 ------G
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 8 C 0
s Microtus_ochrogaster.CM001695.1                         15961253 4 +  27267610 a--g-ag
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361606 1 -   8254450 ------G
i Miniopterus_natalensis.LDJU01000034.1                  I 8 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40507 1 -     48117 ------G
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 8 C 0
s Miopithecus_ogouensis.k141_1534655                         21251 4 -     27822 A--A-GC
i Miopithecus_ogouensis.k141_1534655                     I 7 I 1
s Mirounga_angustirostris.MirAng_flattened_line_54046         7411 1 +     27589 ------A
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 8 C 0
s Mirza_zaza.k141_766280                                     51275 4 -     62432 A--G-AG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351988 1 +    437263 ------G
i Monodon_monoceros.MonMon_M_scaffold_103                I 8 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177669 1 +    366855 ------G
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 8 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23198 1 -     82753 ------G
i Moschus_moschiferus.MosMos_scaffold_13123              I 4 I 2
s Mungos_mungo.MunMun_flattened_line_18455                   17418 1 -     63510 ------A
i Mungos_mungo.MunMun_flattened_line_18455               I 8 C 0
s Murina_feae.MurFea_scaffold_17764                          37544 1 +     47283 ------G
i Murina_feae.MurFea_scaffold_17764                      I 8 C 0
s Mus_caroli.LT608237.1                                   35591787 4 + 120012414 a--g-aa
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686145 4 + 129401213 a--g-aa
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216032 4 +  89631738 a--g-ag
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495465 4 + 130317789 a--g-aa
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81650 4 -     86153 C--G-AG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Myotis_brandtii.KE162005.1                               9791593 1 +  10118263 ------G
i Myotis_brandtii.KE162005.1                             I 8 C 0
s Myotis_davidii.KB100139.1                                4385953 1 +   6019432 ------G
i Myotis_davidii.KB100139.1                              I 8 C 0
s Myotis_lucifugus.GL429869.1                               381772 1 +   4330536 ------G
i Myotis_lucifugus.GL429869.1                            I 8 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          602 1 +     18357 ------G
i Myotis_myotis.MyoMyo_scaffold_66571                    I 8 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118478 4 +    130748 G--G-GG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             944940 4 +   3037898 A--G-AG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              27901 4 +     34575 A--A-AC
i Nasalis_larvatus.k141_1350636                          C 0 I 1
s Neomonachus_schauinslandi.NINY01007730.1                11468006 1 -  31847680 ------A
i Neomonachus_schauinslandi.NINY01007730.1               I 8 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226157 1 -   7148211 ------G
i Neophocaena_asiaeorientalis.KZ687982.1                 I 8 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126456 1 -    149072 ------G
i Noctilio_leporinus.NocLep_scaffold_7894                I 8 C 0
s Nomascus_annamensis.k141_1771965                           52638 4 -    132029 A--A-AG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8733 4 -     16345 A--A-AG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14618 4 +     22201 A--A-AG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412839 4 -  22158432 A--A-AG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25016 4 -     54323 A--A-AG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197131 1 +   9404916 ------A
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 8 C 0
s Nycticebus_bengalensis.LG01                             93635146 4 + 196305487 A--A-AG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1904 4 -      3937 A--A-AG
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563385 4 - 199412804 A--G-AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550091 4 -   3988456 a--a-ag
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Octodon_degus.JH651603.1                                11053108 4 -  11899542 A--G-AG
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450602 1 +   2017862 ------A
i Odobenus_rosmarus.KB229312.1                           I 8 C 0
s Odocoileus_virginianus.KZ100018.1                         435041 1 -    630418 ------G
i Odocoileus_virginianus.KZ100018.1                      I 4 I 2
s Okapia_johnstoni.LVCL01S0005463.1                          13033 1 +    150152 ------G
i Okapia_johnstoni.LVCL01S0005463.1                      I 4 I 2
s Ondatra_zibethicus.OndZib_scaffold_7387                    91612 4 -    140218 A--G-AG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2471 4 -     41509 A--G-AG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095427 1 +  10937097 ------G
i Orcinus_orca.KB316932.1                                I 8 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12499 4 -     14239 A--G-AA
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 10
s Oryctolagus_cuniculus.CM000791.1                       107102562 4 - 174332312 a--g-gg
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38177 1 +    559221 ------A
i Otocyon_megalotis.JAEUCK010005147.1                    I 8 C 0
s Otolemur_crassicaudatus.k141_649260                        38546 4 -     51505 A--G-AG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351549 4 +   1103335 a--g-aG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403023 1 -  44047080 ------g
i Ovis_aries.CM001607.2                                  I 4 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3542 1 +     17875 ------G
i Ovis_canadensis.OviCan_scaffold_67953                  I 4 C 0
s Pan_troglodytes.CM009242.2                               1471732 4 - 189151597 a--a-ag
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23348 1 -    230217 ------A
i Panthera_onca.PanOnc_flattened_line_3271               I 8 C 0
s Panthera_pardus.KV860321.1                              18460674 1 -  18783137 ------A
i Panthera_pardus.KV860321.1                             I 8 C 0
s Panthera_tigris.KE722367.1                               3971394 1 +   8748460 ------A
i Panthera_tigris.KE722367.1                             I 8 C 0
s Pantholops_hodgsonii.KE114653.1                          1614465 1 +   2937107 ------g
i Pantholops_hodgsonii.KE114653.1                        I 4 C 0
s Papio_anubis.CM001495.2                                   242077 2 - 183742232 -----gc
i Papio_anubis.CM001495.2                                I 7 I 1
s Papio_cynocephalus.k141_1507553                             8539 2 +     21308 -----GC
i Papio_cynocephalus.k141_1507553                        I 7 I 1
s Papio_hamadryas.Contig39                                  291113 2 -  20919399 -----GC
i Papio_hamadryas.Contig39                               I 7 I 1
s Papio_kindae.k141_2214839                                  21187 2 -     27687 -----GC
i Papio_kindae.k141_2214839                              I 7 I 1
s Papio_papio.k141_799093                                    14333 2 +     16796 -----GC
i Papio_papio.k141_799093                                I 7 I 1
s Papio_ursinus.k141_2278143                                 21144 2 -     23640 -----GC
i Papio_ursinus.k141_2278143                             I 9 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13987 1 +     78924 ------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 8 C 0
s Perodicticus_ibeanus.k141_1921260                          24826 4 +     31479 A--G-AG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17194 4 -     24908 A--G-AG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         551 4 +      9367 A--G-CC
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245692 4 +  18517816 a--g-ag
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11285 1 -     15039 ------G
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 8 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30933 2 -     56120 A--A---
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                            1350 4 +     55023 A--A-AC
i Piliocolobus_badius.k141_2704958                       C 0 I 1
s Piliocolobus_gordonorum.k141_381342                          900 4 -     89929 A--A-AC
i Piliocolobus_gordonorum.k141_381342                    C 0 I 1
s Piliocolobus_kirkii.k141_1310104                            1489 4 +     40849 A--A-AC
i Piliocolobus_kirkii.k141_1310104                       C 0 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                  253153 4 +  14605196 a--a-ac
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2145 1 +     22231 ------G
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 8 C 0
s Pithecia_albicans.k141_1239476                             63788 4 +    207309 A--A-AG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4881 4 -     25401 A--A-AG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30624 4 +     58159 A--A-AG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30900 4 +     63561 A--A-AG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30660 4 +     51148 A--A-AG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555630 4 -   4542175 A--A-AG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30644 4 +     51125 A--A-AG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3369 1 -      8168 ------G
i Platanista_gangetica.PlaMin_flattened_line_167872      I 8 C 0
s Plecturocebus_bernhardi.k141_2549090                        7049 2 +     39866 -----AG
i Plecturocebus_bernhardi.k141_2549090                   I 1 C 0
s Plecturocebus_brunneus.k141_862875                          2133 2 -      9282 -----AG
i Plecturocebus_brunneus.k141_862875                     I 1 C 0
s Plecturocebus_caligatus.k141_1382851                       41537 2 -     87950 -----AG
i Plecturocebus_caligatus.k141_1382851                   I 1 C 0
s Plecturocebus_cinerascens.k141_1164729                     41931 2 -     88961 -----AG
i Plecturocebus_cinerascens.k141_1164729                 I 1 C 0
s Plecturocebus_cupreus.k141_2351393                          6629 2 -     39403 -----AG
i Plecturocebus_cupreus.k141_2351393                     I 1 C 0
s Plecturocebus_dubius.k141_1058799                          41582 2 +     87928 -----AG
i Plecturocebus_dubius.k141_1058799                      I 1 C 0
s Plecturocebus_grovesi.k141_2013005                          6626 2 -     60166 -----AG
i Plecturocebus_grovesi.k141_2013005                     I 1 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13563 2 -     67232 -----AG
i Plecturocebus_hoffmannsi.k141_3303950                  I 1 C 0
s Plecturocebus_miltoni.k141_349282                          41479 2 -     90634 -----AG
i Plecturocebus_miltoni.k141_349282                      I 1 C 0
s Plecturocebus_moloch.k141_1031110                          42946 2 +     89403 -----AG
i Plecturocebus_moloch.k141_1031110                      I 1 C 0
s Pongo_abelii.CM009266.2                                   176856 4 - 189387572 a--a-ag
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191673 4 -   9816681 A--A-AG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26484 4 +     69807 A--A-AC
i Presbytis_comata.k141_1230337                          C 0 I 1
s Presbytis_mitrata.k141_584736                              43680 4 -     80239 A--A-AC
i Presbytis_mitrata.k141_584736                          C 0 I 1
s Prolemur_simus.MPIZ01000396.1                            1981502 4 +   4620579 a--g-aG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564969 4 -   2598838 A--G-AG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2605 4 -      7103 A--G-AG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3202 4 -     11706 A--G-AG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6938 4 -     30655 A--G-AG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33263 4 +     46564 A--G-AG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93534 4 -     98465 A--G-AG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7171 4 +     35169 A--G-AG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            35491 4 +     52041 g--a-ag
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50551 1 -     66298 ------G
i Pteronotus_parnellii.KE847780.1                        I 8 C 0
s Pteropus_alecto.KB030862.1                               5839799 1 -  28871421 ------g
i Pteropus_alecto.KB030862.1                             I 7 C 0
s Pteropus_vampyrus.KN525825.1                             3536308 1 -   4952924 ------g
i Pteropus_vampyrus.KN525825.1                           I 7 C 0
s Puma_concolor.QAVW01001104.1                            18097988 1 +  38429054 ------A
i Puma_concolor.QAVW01001104.1                           I 8 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51960 1 +     55069 ------G
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 2 I 2
s Pygathrix_cinerea.k141_1153803                             25858 2 +     91421 A--A---
i Pygathrix_cinerea.k141_1153803                         C 0 I 3
s Pygathrix_nigripes_b.ctg100                                  152355 2 -   7812017 C--A---
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6728 2 +     72585 A--A---
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rattus_norvegicus.chr16                                 37021390 4 -  90668790 a--g-ag
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913693 1 +   3329780 ------G
i Rhinolophus_sinicus.LVEH01000134.1                     I 7 C 0
s Rhinopithecus_bieti.k119_778604                              430 4 +      7119 A--A-AC
i Rhinopithecus_bieti.k119_778604                        C 0 I 1
s Rhinopithecus_roxellana.NC_044550.1                    104121038 4 + 195417433 a--a-aa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 1
s Rhinopithecus_strykeri.ctg102                             235280 4 -   7961872 A--A-AC
i Rhinopithecus_strykeri.ctg102                          C 0 I 1
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73721 1 -    116970 ------G
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 7 C 0
s Saguinus_bicolor.k141_1429097                               2927 4 +     27962 A--A-AG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2822 4 +      6077 A--A-AG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2913 4 +      5971 A--A-AG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2835 4 +      5932 A--A-AG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1177 4 -      4390 A--A-AG
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390612 4 - 209938924 A--A-AG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2784 4 +      5979 A--A-AG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3546 4 -      4301 A--A-AG
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6615 1 +     16473 ------G
i Saiga_tatarica.SaiTat_scaffold_39512                   I 4 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107953 4 + 121099817 a--a-ag
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29514 4 -     47369 A--A-AG
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29902 4 -     79414 A--A-AG
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26593 4 -     34454 A--A-AG
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14000 4 -     22428 A--A-AG
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29146 4 -     47109 A--A-AG
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237206 4 +   5703754 A--A-AG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6796 4 +     21866 A--A-AG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114902 1 +    313613 ------C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 4 C 0
s Semnopithecus_entellus.k141_158471                         24177 4 +     27374 A--A-AC
i Semnopithecus_entellus.k141_158471                     C 0 I 1
s Semnopithecus_hypoleucos.k141_1910531                      27691 4 +     58920 A--A-AC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 I 1
s Semnopithecus_johnii.k141_843753                           14187 4 -     45317 A--A-AC
i Semnopithecus_johnii.k141_843753                       C 0 I 1
s Semnopithecus_priam.k141_714795                            21846 4 -     42441 A--A-AC
i Semnopithecus_priam.k141_714795                        C 0 I 1
s Semnopithecus_schistaceus.k141_1432920                     24526 3 -     29113 A--A-A-
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27598 4 -     48123 A--A-AC
i Semnopithecus_vetulus.k141_244474                      C 0 I 1
s Sigmodon_hispidus.SigHis_scaffold_20193                    48100 4 +     77746 A--G-AG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857219 4 -   1910179 A--G-AG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867222 4 +   3870691 A--G-AG
i Spermophilus_dauricus.KZ294078.1                       C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525              5581 1 -     97271 ------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 8 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123825 1 +    196729 ------A
i Suricata_suricatta.SurSur_flattened_line_6629          I 8 C 0
s Symphalangus_syndactylus.tarseq_199                       390100 4 +   1523678 A--A-AG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12531 1 +     22964 ------G
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 8 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1594 4 +      5583 G--G-AG
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190507 1 +    199430 ------G
i Tapirus_indicus.TapInd_scaffold_7432                   I 8 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104459 1 -    539355 ------G
i Tapirus_terrestris.TapTer_scaffold_755                 I 8 C 0
s Tarsius_lariang.k141_1780720                                5797 4 +      6850 A--G-AG
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5848 4 +     20590 A--G-AG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352061 4 - 186847797 a--a-gc
i Theropithecus_gelada.CM009954.1                        I 7 I 1
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23243 2 -     33621 t--a---
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18718 4 -     31044 A--G-AG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478577 1 -    610378 ------G
i Tonatia_saurophila.TonSau_scaffold_294                 I 8 C 0
s Trachypithecus_auratus.k141_1189070                        19728 2 +     26378 A--A---
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32401 4 -     78344 A-AA--C
i Trachypithecus_crepusculus.k141_539312                 C 0 I 1
s Trachypithecus_cristatus.k141_180416                       19053 2 +     25722 A--A---
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27352 3 -     62838 A--A--C
i Trachypithecus_francoisi.k141_1453105                  C 0 I 1
s Trachypithecus_geei.k141_1001272                           27399 4 +     46913 A--A-AC
i Trachypithecus_geei.k141_1001272                       C 0 I 1
s Trachypithecus_germaini.k141_57262                          8208 4 -     28527 A--AA-C
i Trachypithecus_germaini.k141_57262                     C 0 I 1
s Trachypithecus_hatinhensis.k141_31479                      29291 3 -     64340 A--A--C
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 1
s Trachypithecus_laotum.k141_928651                          27328 3 -     63452 A--A--C
i Trachypithecus_laotum.k141_928651                      C 0 I 1
s Trachypithecus_leucocephalus.k141_96450                     8771 3 +     22490 A--A--C
i Trachypithecus_leucocephalus.k141_96450                C 0 I 1
s Trachypithecus_melamera.k141_591572                         2199 3 -      6147 A--A--C
i Trachypithecus_melamera.k141_591572                    C 0 I 1
s Trachypithecus_obscurus.k141_848057                         9103 4 -     13050 A-AA--C
i Trachypithecus_obscurus.k141_848057                    C 0 I 1
s Trachypithecus_phayrei.ctg124                             254343 4 -   6242583 A-AA--C
i Trachypithecus_phayrei.ctg124                          C 0 I 1
s Trachypithecus_pileatus.k141_2622778                         367 4 +     19340 A--A-AC
i Trachypithecus_pileatus.k141_2622778                   C 0 I 1
s Tragulus_javanicus.TraJav_scaffold_3462                   172231 1 -    200418 ------G
i Tragulus_javanicus.TraJav_scaffold_3462                I 4 I 2
s Trichechus_manatus.JH594705.1                            6479343 4 -  10818551 a--g-aa
i Trichechus_manatus.JH594705.1                          C 0 I 9
s Tupaia_chinensis.KB320699.1                              1832738 4 -   4065304 A--G-AC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7058 4 -     70247 A--G-AG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360162 1 -  33153633 ------G
i Tursiops_truncatus.MRVK01000835.1                      I 6 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    1359 1 -     21056 ------G
i Uropsilus_gracilis.UroGra_scaffold_46687               I 4 C 0
s Ursus_maritimus.KK499267.1                                180760 1 +   5085361 ------A
i Ursus_maritimus.KK499267.1                             I 8 C 0
s Varecia_rubra.k141_787544                                  24146 4 -     30710 A--G-AG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23053 4 -    147434 A--G-AG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75238 1 +   5488506 ------g
i Vicugna_pacos.KN270157.1                               I 7 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103899 1 -    112863 ------A
i Vulpes_lagopus.VulLag_flattened_line_12041             I 8 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173000 4 -    224448 A--G-AG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27800 1 -     86975 ------A
i Zalophus_californianus.ZalCal_flattened_line_17732     I 8 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2274 4 +      2695 A--G-AG
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3582 13 -     18639 I
e Mustela_putorius.JH418006.1                             14354015 13 +  14710649 I
e Enhydra_lutris.KZ291758.1                               24914979 13 +  41312741 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751 0 -    498745 C
e Equus_caballus.CM000403.2                               21373965 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041 0 -   4378816 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4393  4 +     36723 A-G-------A---A
s Acinonyx_jubatus.LLWD01001279.1                           811728  1 +   1699592 G--------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18809  4 +     63021 A-A-------A---A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414255  4 +  29979442 G-G-------A---A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214565  4 +    347723 A-G-------A---A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16846  4 -     61208 A-G-------A---A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46715  2 +     53615 ----------A---A
i Allenopithecus_nigroviridis.k141_3755588               I 1 C 0
s Allochrocebus_lhoesti.k141_441277                          42676  2 +     44087 ----------A---A
i Allochrocebus_lhoesti.k141_441277                      I 1 C 0
s Allochrocebus_preussi.k141_1993939                         15301  2 -     21945 ----------A---A
i Allochrocebus_preussi.k141_1993939                     I 1 C 0
s Allochrocebus_solatus.k141_3554717                         16984  2 +     32033 ----------A---A
i Allochrocebus_solatus.k141_3554717                     I 1 C 0
s Alouatta_belzebul.k141_1011583                             71150  4 -     84148 A-G-------A---A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43389  4 -     78289 A-G-------A---A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42828  4 +     55831 A-G-------A---A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41278  4 -     64179 A-G-------A---A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22917  4 -     24835 A-G-------A---A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39903  4 +     45454 A-G-------A---A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45549  4 +     70886 A-G-------A---A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7725  4 +     30854 A-G-------A---A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31861  4 +     42133 A-G-------A---A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584085  2 +   2318259 a-C------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      175539  4 -    412891 A-G-------A---A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49186  1 -     68529 --------------A
i Antilocapra_americana.AntAmePen_scaffold_21030         I 2 C 0
s Aotus_azarae.k141_118258                                   49585  4 -     65372 A-G-------A---A
i Aotus_azarae.k141_118258                               C 0 C 0
s Aotus_griseimembra.k141_982342                             43338  4 +     43593 A-G-------A---A
i Aotus_griseimembra.k141_982342                         C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671351  4 +   5030052 a-g-------a---a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_192090                              22993  4 -     23494 A-G-------A---A
i Aotus_trivirgatus.k141_192090                          C 0 C 0
s Aotus_vociferans.k141_944972                                8129  4 +      8415 A-G-------A---A
i Aotus_vociferans.k141_944972                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14882  4 -     32367 A-A-------A---A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3827  4 -     15198 A-G-------A---A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273612  4 +  21539123 A-G-------A---A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9780  4 +     48076 A-G-------A---A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4917  4 -     28759 A-G-------A---A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32469  4 +     44353 A-G-------A---A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47840  4 -     71267 A-G-------A---A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21899  4 -     33135 A-G-------A---A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5089  4 +     11645 A-G-------A---G
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5095  4 -     19611 A-G-------A---G
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955917  4 -  23207421 A-G-------A---A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3126  4 -      4711 A-G-------A---A
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85080  2 +    124022 A-C------------
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 1
s Bison_bison.KN261452.1                                     20613  2 +    288883 A-C------------
i Bison_bison.KN261452.1                                 C 0 I 1
s Bos_indicus.CM003047.1                                  20355000  2 +  48749331 A-C------------
i Bos_indicus.CM003047.1                                 C 0 I 1
s Bos_mutus.JH880303.1                                      753568  2 +   1948126 A-C------------
i Bos_mutus.JH880303.1                                   C 0 I 1
s Bos_taurus.CM000203.6                                   27543707  2 -  45695690 A-C------------
i Bos_taurus.CM000203.6                                  C 0 I 1
s Bubalus_bubalis.KI419123.1                               1528731  2 -   4408762 A-C------------
i Bubalus_bubalis.KI419123.1                             C 0 I 1
s Cacajao_ayresi.k141_96119                                   6799  4 +     28062 A-A-------A---A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42093  4 -     91139 A-A-------A---A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19619  4 +     95584 A-A-------A---A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19532  4 +    119600 A-A-------A---A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9085  4 +     18648 A-G-------A---A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8624  4 -     13885 A-G-------A---A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             692  4 -      8861 A-G-------A---A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453085  4 + 189096842 A-G-------A---A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                607  4 +      8664 A-G-------A---A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629905  4 +  17673402 a-g-------a---A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664191  4 +   7040546 a-g-------a---A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207851  4 +   1652518 a-g-------a---A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504270  4 +  60362399 G-G-------A---A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7906  4 -     23171 G-G-------A---A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221249  4 +   9314153 G-G-------A---A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614384  4 +  59632846 G-G-------A---A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105965  4 -  63665305 G-G-------A---A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407797  2 -  46296322 a-C------------
i Capra_aegagrus.CM003241.1                              C 0 I 1
s Capra_hircus.CM004588.1                                 26590070  2 +  44709034 A-C------------
i Capra_hircus.CM004588.1                                C 0 I 1
s Capromys_pilorides.CapPil_scaffold_108409                   6904  4 +      8835 A-G-------A---A
i Capromys_pilorides.CapPil_scaffold_108409              C 0 I 7
s Carlito_syrichta.NW_007259797.1                           269175  4 +    496798 A-G-------A---A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               4120  4 +      5315 A-G-------A---A
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78270  4 -    217609 A-G-------A---A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994976  4 +  23392119 a-g-------a---a
i Cavia_aperea.AVPZ01000300.1                            C 0 I 9
s Cavia_porcellus.DS562891.1                               4998418  4 +  23407841 a-g-------a---a
i Cavia_porcellus.DS562891.1                             C 0 I 9
s Cavia_tschudii.CavTsc_scaffold_23560                       61519  4 -     66877 A-G-------A---A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 9
s Cebuella_niveiventris.k141_592277                           4003  4 -     12580 A-G-------A---A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42060  4 +     53515 A-G-------A---A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369992  4 -  26074798 A-G-------A---G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6881  4 -     34880 A-G-------A---G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65976  4 -     89041 A-G-------A---G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1106  4 -      5494 A-G-------A---A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491056  4 -  27778364 A-G-------A---A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17889  4 +     27315 A-G-------A---A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139898  2 -   4669795 ----------a---a
i Cercocebus_atys.KQ010504.1                             I 1 C 0
s Cercocebus_chrysogaster.k141_1522556                       43640  2 +     47900 ----------A---A
i Cercocebus_chrysogaster.k141_1522556                   I 1 C 0
s Cercocebus_lunulatus.k141_2779015                          43467  2 -     44860 ----------A---A
i Cercocebus_lunulatus.k141_2779015                      I 1 C 0
s Cercocebus_torquatus.k141_2159127                          43453  2 -    148725 ----------A---A
i Cercocebus_torquatus.k141_2159127                      I 1 C 0
s Cercopithecus_ascanius.k141_3120866                        25670  2 -     40656 ----------A---A
i Cercopithecus_ascanius.k141_3120866                    I 1 C 0
s Cercopithecus_cephus.k141_4183004                           5636  2 +     20796 ----------A---A
i Cercopithecus_cephus.k141_4183004                      I 1 C 0
s Cercopithecus_diana.k141_132293                            10713  2 -     17524 ----------A---A
i Cercopithecus_diana.k141_132293                        I 1 C 0
s Cercopithecus_hamlyni.k141_566925                          26435  2 -     34525 ----------A---A
i Cercopithecus_hamlyni.k141_566925                      I 1 C 0
s Cercopithecus_lowei.k141_2101310                           10256  2 -     25376 ----------A---A
i Cercopithecus_lowei.k141_2101310                       I 1 C 0
s Cercopithecus_albogularis.ctg5                                  362856  2 -  39242232 ----------A---A
i Cercopithecus_albogularis.ctg5                               I 1 C 0
s Cercopithecus_mona.ctg39                                  268568  2 +  21565898 ----------A---A
i Cercopithecus_mona.ctg39                               I 1 C 0
s Cercopithecus_neglectus.k141_858615                        30902  2 -     45857 ----------A---A
i Cercopithecus_neglectus.k141_858615                    I 1 C 0
s Cercopithecus_nictitans.k141_2995370                       25842  2 -     32606 ----------A---A
i Cercopithecus_nictitans.k141_2995370                   I 1 C 0
s Cercopithecus_petaurista.k141_42573                         2000  2 +      8499 ----------A---A
i Cercopithecus_petaurista.k141_42573                    I 1 C 0
s Cercopithecus_pogonias.k141_6079                           24398  2 +     70610 ----------A---A
i Cercopithecus_pogonias.k141_6079                       I 1 C 0
s Cercopithecus_roloway.k141_3012935                         21327  2 +     36323 ----------A---A
i Cercopithecus_roloway.k141_3012935                     I 1 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11688  4 -     19938 A-G-------A---A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29508  4 -     33796 A-G-------A---G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4025  4 -     15404 A-G-------A---G
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7883  4 -     32913 A-A-------A---A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18296  4 -     40346 A-A-------A---A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18551  4 +    216457 A-A-------A---A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18344  4 +     39636 A-A-------A---A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237456  4 -   2543920 A-C-------A---A
i Chinchilla_lanigera.JH722012.1                         C 0 I 9
s Chiropotes_albinasus.k141_1946120                           2933  4 +      5346 A-G-------A---A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41428  4 -    112038 A-A-------A---A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           6999  4 +     34062 A-A-------A---A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342218  2 +  18827391 ----------A---A
i Chlorocebus_aethiops.ctg25                             I 1 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8764  2 -     44032 ----------A---A
i Chlorocebus_pygerythrus.k141_3063162                   I 1 C 0
s Chlorocebus_sabaeus.CM001947.1                            303542  2 - 135778131 ----------a---a
i Chlorocebus_sabaeus.CM001947.1                         I 1 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13004  3 +     15858 A-G-------G----
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            604580  3 -    839153 a-g-------g----
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407980  2 -   2368649 ----------a---a
i Colobus_angolensis.KN981557.1                          I 1 C 0
s Colobus_guereza.LG01                                      377855  2 - 200372422 ----------A---A
i Colobus_guereza.LG01                                   I 1 C 0
s Colobus_polykomos.k141_906115                               1404  2 -     84244 ----------A---A
i Colobus_polykomos.k141_906115                          I 1 C 0
s Condylura_cristata.JH655891.1                           35806113  4 +  53390261 A-G-------A---A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1687  4 -      8242 A-G-------A---A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113570  4 - 224834208 A-A-------A---A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3189  1 +     87169 G--------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643812  4 -   1526836 A-A-------G---A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16444  4 +     50838 A-G-------A---A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 9
s Cuniculus_paca.CunPac_flattened_line_7025                   2922  4 +     36344 A-G-------A---A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 7
s Dasyprocta_punctata.DasPun_flattened_line_15900            26679  4 +     75252 A-G-------A---A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 9
s Dasypus_novemcinctus.JH564415.1                          2109031  4 -   2246927 a-g-------a---a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291460  4 +  12879189 G-G-------A---G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624246  4 -  35494412 A-G-------A---A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863569  4 -  20541912 A-G-------A---A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663347  4 -   1390856 A-G-------A---A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138133  4 -    198055 A-G-------A---A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97491  4 -    115145 A-G-------A---A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 9
s Dipodomys_ordii.KN672350.1                              18949188  4 -  37912305 a-g-------A---A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4135  4 -     10735 A-G-------A---A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8945  4 +     14636 A-G-------A---A
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 9
s Echinops_telfairi.JH980293.1                            62853623 11 - 111700974 a-atATGCACA---T
i Echinops_telfairi.JH980293.1                           I 424 C 0
s Eidolon_helvum.AWHC01266696.1                               5150  4 +     19438 a-g-------A---A
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238473  1 -    607251 --------------A
i Elaphurus_davidianus.JRFZ01104969.1                    I 2 C 0
s Elephantulus_edwardii.JH947257.1                         9107422 11 -  10337057 A-GTGAGCACA---A
i Elephantulus_edwardii.JH947257.1                       I 9 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29845  4 +    110024 a-a-------a---a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11820  4 +     18970 a-a-------a---a
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24914992  4 +  41312741 a-g-------a---a
i Enhydra_lutris.KZ291758.1                              I 13 C 0
s Eptesicus_fuscus.JH977646.1                             12577197  4 +  14770903 A-G-------A---G
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erythrocebus_patas.Contig38                               261745  2 +  21539334 ----------A---A
i Erythrocebus_patas.Contig38                            I 1 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63796  4 -    133382 A-G-------A---A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4013  4 +      7672 A-G-------A---A
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13633  4 -     24895 A-G-------A---G
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41342  4 -     70999 A-G-------A---G
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85304  4 +    112731 A-G-------A---G
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41873  4 +     68309 A-G-------A---G
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52199  4 -     65740 A-G-------A---G
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22828  4 -     75513 A-G-------A---G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47025  4 -     97555 A-G-------A---G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3750  4 +     30972 A-G-------A---G
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41470  4 -     52037 A-G-------A---G
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57872  4 -    111500 A-G-------A---G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245641  1 - 206538554 G--------------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115426  1 - 205367284 G--------------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26528  1 -     30238 G--------------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123397  4 -    137831 A-G-------A---G
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6942  4 +     22493 A-G-------A---G
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18993  4 -     32986 A-G-------A---G
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17953  4 +     18121 A-G-------A---A
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90152  1 -     95226 --------------A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 2 C 0
s Glis_glis.GliGli_scaffold_33859                            33074  4 -     36801 A-G-------A---A
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4696  4 -      8343 A-G-------A---A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253707  4 - 186649187 a-g-------a---a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     571  4 -     78134 A-G-------A---A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13558  4 -     40692 A-G-------A---G
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34960  4 +     49394 A-G-------A---G
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59829  4 -     66874 A-G-------A---G
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8702  4 -     42923 A-G-------A---G
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15702  4 -     53142 A-G-------A---G
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29666  1 -    327341 G--------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7904  2 +     48891 A-C------------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 1
s Heterocephalus_glaber.JH602082.1                         1926094  4 -  22651954 A-G-------A---A
i Heterocephalus_glaber.JH602082.1                       C 0 I 9
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6509  4 -     36432 A-G-------A---A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49677  4 +     49977 G-G-------A---G
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141715  4 -    630532 A-G-------A---A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68585  1 +     83186 G--------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70363  4 +    143317 A-C-------A---A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 9
s Hylobates_agilis.k141_1155965                               4750  4 +     12352 A-G-------A---A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11934  4 +     55766 A-G-------A---A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051532  4 + 191637585 A-G-------A---A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800410  4 +  11177569 A-G-------A---A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3041  4 -    135385 A-G-------A---A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 9
s Ictidomys_tridecemlineatus.JH393364.1                     385649  1 +   7955117 --------------A
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Indri_indri.k141_2415743                                    1212  4 +     11955 A-G-------A---G
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2033  4 -     16823 A-C-------A---A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238030  4 +   9596543 A-G-------A---A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64512  4 -     97402 A-G-------A---A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42156  4 +    110728 A-G-------A---A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61063  4 -     65777 A-A-------A---G
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758351  4 +  30322482 A-G-------A---G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3071  4 -     13097 A-G-------A---A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2825  4 +      5940 A-G-------A---A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2655  4 -      5717 A-G-------A---A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9020  4 -     11567 A-G-------A---A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10401  4 -     12945 A-G-------A---A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7880  4 +     29618 A-G-------A---G
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7876  4 +     31569 A-G-------A---G
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7886  4 +     24756 A-G-------A---G
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7886  4 +     16388 A-G-------A---G
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812404  4 -   3914936 G-G-------A---A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16730  4 +     24238 A-G-------A---G
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333553  4 +    662738 A-G-------A---A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               331851  2 -   1826925 ----------A---A
i Lophocebus_aterrimus.ctg367                            I 1 C 0
s Loris_lydekkerianus.k141_2031736                            9154  4 +     19643 A-G-------A---G
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042815  4 -   6120653 A-G-------A---G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079896 11 +  43346337 A-GTATGCACA---A
i Loxodonta_africana.GL010049.1                          I 9 C 0
s Lycaon_pictus.CM007581.1                                41613539  4 +  59628241 G-G-------A---A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44167  2 -     61512 ----------A---A
i Macaca_arctoides.k141_1757516                          I 1 C 0
s Macaca_assamensis.Contig5                                 371829  2 -  60120075 ----------A---A
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_263443                                24092  2 +     30207 ----------A---A
i Macaca_cyclopis.k119_263443                            I 1 C 0
s Macaca_fascicularis.k141_1397292                           21195  2 -     24934 ----------A---A
i Macaca_fascicularis.k141_1397292                       I 1 C 0
s Macaca_fuscata.k119_546792                                 24045  2 +     30527 ----------A---A
i Macaca_fuscata.k119_546792                             I 1 C 0
s Macaca_leonina.k141_321385                                 35221  2 -     50087 ----------A---A
i Macaca_leonina.k141_321385                             I 1 C 0
s Macaca_maura.k141_1103459                                  44965  2 +     51645 ----------A---A
i Macaca_maura.k141_1103459                              I 1 C 0
s Macaca_mulatta.NC_041758.1                                414168  2 - 187317192 ----------a---a
i Macaca_mulatta.NC_041758.1                             I 1 C 0
s Macaca_nemestrina.KQ007038.1                              398398  2 +  25927173 ----------a---a
i Macaca_nemestrina.KQ007038.1                           I 1 C 0
s Macaca_nigra.k141_2818840                                  47570  2 -     62418 ----------A---A
i Macaca_nigra.k141_2818840                              I 1 C 0
s Macaca_radiata.k141_3557992                                24218  2 +     24253 ----------A---A
i Macaca_radiata.k141_3557992                            I 1 n 1
s Macaca_siberu.k141_2185972                                 44042  2 +     59329 ----------A---A
i Macaca_siberu.k141_2185972                             I 1 C 0
s Macaca_silenus.Contig273                                  269950  2 +    668171 ----------A---A
i Macaca_silenus.Contig273                               I 1 C 0
s Macaca_thibetana.k99_503078                                  226  2 +      1732 ----------A---A
i Macaca_thibetana.k99_503078                            I 1 C 0
s Macaca_tonkeana.k141_339739                                 1748  2 +     17132 ----------A---A
i Macaca_tonkeana.k141_339739                            I 1 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222115  4 -    270270 A-G-------A---A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321247  2 +  24302211 ----------A---A
i Mandrillus_leucophaeus.scaffold280                     I 1 C 0
s Mandrillus_sphinx.Contig270                               356079  2 -    752769 ----------A---A
i Mandrillus_sphinx.Contig270                            I 1 C 0
s Manis_javanica.JSZB01003497.1                             672430  4 -    737560 A-G-------A---A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219717  4 +    317179 a-g-------a---a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499870  1 +  40650429 --------------A
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149276  4 +    207569 A-G-------A---A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25096  4 -     74585 a-g-------a---a
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47922  4 -    140813 A-A-------A---A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428121  4 +  29670104 A-A-------A---A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80099  4 +     93471 A-G-------A---A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9194  4 +     17804 A-G-------A---A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9696  4 -     12984 A-G-------A---A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18010  4 -     26561 A-G-------A---A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983490  4 +  93316391 A-G-------A---G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44668  5 +    145209 c-at------A---T
i Microgale_talazaci.MicTal_scaffold_6613                I 400 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183510  4 +    200668 A-G-------A---A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961257  4 +  27267610 a-a-------a---a
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6361607  4 -   8254450 A-G-------A---G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             40508  4 -     48117 A-G-------A---G
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21256  2 -     27822 ----------A---A
i Miopithecus_ogouensis.k141_1534655                     I 1 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7412  4 +     27589 G-G-------A---A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51279  4 -     62432 A-G-------A---G
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351989  4 +    437263 A-G-------A---A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177670  4 +    366855 A-G-------G---A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23201  1 -     82753 --------------A
i Moschus_moschiferus.MosMos_scaffold_13123              I 2 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17419  1 -     63510 G--------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37545  4 +     47283 A-G-------A---G
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35591791  4 + 120012414 a-a-------a---a
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686149  5 + 129401213 aaa-------a---a
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216036  4 +  89631738 a-a-------a---a
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495469  5 + 130317789 aaa-------a---a
i Mus_spretus.CM004101.1                                 C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_12866             81654  4 -     86153 A-G-------A---A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354028  4 +  14710649 a-g-------a---a
i Mustela_putorius.JH418006.1                            I 13 C 0
s Myotis_brandtii.KE162005.1                               9791594  4 +  10118263 A-G-------A---G
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4385954  4 +   6019432 A-G-------A---G
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               381773  4 +   4330536 A-G-------A---G
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                          603  3 +     18357 A-G-------A----
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118482  4 +    130748 A-G-------A---A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             944944  4 +   3037898 A-C-------A---A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              27906  2 +     34575 ----------A---A
i Nasalis_larvatus.k141_1350636                          I 1 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468007  4 -  31847680 G-G-------A---A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226158  4 -   7148211 A-G-------A---A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126457  1 -    149072 A--------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52642  4 -    132029 A-G-------A---A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8737  4 -     16345 A-G-------A---A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14622  4 +     22201 A-G-------A---A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412843  4 -  22158432 A-G-------A---A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25020  4 -     54323 A-G-------A---A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197132  4 +   9404916 G-G-------A---A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635150  4 + 196305487 A-G-------A---T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1908  4 -      3937 A-G-------A---T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563389  4 - 199412804 A-G-------A---T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550095  4 -   3988456 a-g-------a---g
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053112  4 -  11899542 A-G-------A---A
i Octodon_degus.JH651603.1                               C 0 I 9
s Odobenus_rosmarus.KB229312.1                             1450603  4 +   2017862 G-G-------A---A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435044  1 -    630418 --------------A
i Odocoileus_virginianus.KZ100018.1                      I 2 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13036  1 +    150152 --------------A
i Okapia_johnstoni.LVCL01S0005463.1                      I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91616  4 -    140218 A-A-------A---A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2475  4 -     41509 A-A-------A---A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095428  4 +  10937097 A-G-------A---A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12513 11 -     14239 A-GTATGCACA---T
i Orycteropus_afer.OryAfe_flattened_line_171931          I 10 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102566  4 - 174332312 a-g-------a---g
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38178  4 +    559221 G-G-------A---A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38550  4 -     51505 A-G-------A---G
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351553  4 +   1103335 A-G-------A---G
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403024  2 -  44047080 a-C------------
i Ovis_aries.CM001607.2                                  C 0 I 1
s Ovis_canadensis.OviCan_scaffold_67953                       3543  2 +     17875 A-C------------
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 1
s Pan_troglodytes.CM009242.2                               1471736  4 - 189151597 a-g-------a---a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   242080  2 - 183742232 ----------a---a
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_1507553                             8542  2 +     21308 ----------A---A
i Papio_cynocephalus.k141_1507553                        I 1 C 0
s Papio_hamadryas.Contig39                                  291116  2 -  20919399 ----------A---A
i Papio_hamadryas.Contig39                               I 1 C 0
s Papio_kindae.k141_2214839                                  21190  2 -     27687 ----------A---A
i Papio_kindae.k141_2214839                              I 1 C 0
s Papio_papio.k141_799093                                    14336  2 +     16796 ----------A---A
i Papio_papio.k141_799093                                I 1 C 0
s Papio_ursinus.k141_2278143                                 21147  2 -     23640 ----------A---A
i Papio_ursinus.k141_2278143                             I 1 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23349  1 -    230217 G--------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460675  1 -  18783137 G--------------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971395  1 +   8748460 G--------------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614466  2 +   2937107 a-c------------
i Pantholops_hodgsonii.KE114653.1                        C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13988  1 +     78924 A--------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24830  4 +     31479 A-G-------A---G
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17198  4 -     24908 A-G-------A---G
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         555  4 +      9367 A-G-------A---A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245696  4 +  18517816 a-a-------a---a
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30935  4 -     56120 A-G-------A---A
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 9
s Phocoena_phocoena.PhoPho_flattened_line_46867              11286  4 -     15039 A-G-------A---A
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1355  2 +     55023 ----------A---A
i Piliocolobus_badius.k141_2704958                       I 1 C 0
s Piliocolobus_gordonorum.k141_381342                          905  2 -     89929 ----------A---A
i Piliocolobus_gordonorum.k141_381342                    I 1 C 0
s Piliocolobus_kirkii.k141_1310104                            1494  2 +     40849 ----------A---A
i Piliocolobus_kirkii.k141_1310104                       I 1 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253158  2 +  14605196 ----------a---a
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2146  1 +     22231 A--------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63792  4 +    207309 A-A-------A---A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4885  4 -     25401 A-A-------A---A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30628  4 +     58159 A-A-------A---A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30904  4 +     63561 A-A-------A---A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30664  4 +     51148 A-A-------A---A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555634  4 -   4542175 A-A-------A---A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30648  4 +     51125 A-A-------A---A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3370  4 -      8168 A-G-------A---A
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7051  4 +     39866 A-A-------A---A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2135  4 -      9282 A-A-------A---A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41539  4 -     87950 A-A-------A---A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41933  4 -     88961 A-A-------A---A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6631  4 -     39403 A-A-------A---A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41584  4 +     87928 A-A-------A---A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6628  4 -     60166 A-A-------A---A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13565  4 -     67232 A-A-------A---A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41481  4 -     90634 A-A-------A---A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42948  4 +     89403 A-A-------A---A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176860  4 - 189387572 a-g-------a---a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191677  4 -   9816681 A-G-------A---A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26489  2 +     69807 ----------A---A
i Presbytis_comata.k141_1230337                          I 1 C 0
s Presbytis_mitrata.k141_584736                              43685  2 -     80239 ----------A---A
i Presbytis_mitrata.k141_584736                          I 1 C 0
s Prolemur_simus.MPIZ01000396.1                            1981506  4 +   4620579 A-G-------A---G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564973  4 -   2598838 A-G-------A---G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2609  4 -      7103 A-G-------A---G
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3206  4 -     11706 A-G-------A---G
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6942  4 -     30655 A-G-------A---G
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33267  4 +     46564 A-G-------A---G
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93538  4 -     98465 A-G-------A---G
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7175  4 +     35169 A-G-------A---G
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            35495  4 +     52041 a-a-------a---a
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50552  4 -     66298 A-T-------A---G
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3595  4 -     18639 A-G-------A---A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 13 C 0
s Pteropus_alecto.KB030862.1                               5839800  4 -  28871421 a-g-------A---A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536309  4 -   4952924 a-G-------A---A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25863  2 +     91421 ----------A---A
i Pygathrix_cinerea.k141_1153803                         I 3 C 0
s Pygathrix_nigripes_b.ctg100                                  152357  2 -   7812017 ----------A---A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6730  2 +     72585 ----------A---A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51963  1 +     55069 --------------A
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 2 C 0
s Puma_concolor.QAVW01001104.1                            18097989  1 +  38429054 G--------------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Rattus_norvegicus.chr16                                 37021394  4 -  90668790 a-a-------a---a
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913694  4 +   3329780 A-G-------A---A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              435  2 +      7119 ----------A---A
i Rhinopithecus_bieti.k119_778604                        I 1 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121043  2 + 195417433 ----------a---a
i Rhinopithecus_roxellana.NC_044550.1                    I 1 C 0
s Rhinopithecus_strykeri.ctg102                             235285  2 -   7961872 ----------A---A
i Rhinopithecus_strykeri.ctg102                          I 1 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73722  4 -    116970 A-G-------A---T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               2931  4 +     27962 A-G-------A---A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2826  4 +      6077 A-G-------A---A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2917  4 +      5971 A-G-------A---A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2839  4 +      5932 A-G-------A---A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1181  4 -      4390 A-G-------A---A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390616  4 - 209938924 A-G-------A---A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2788  4 +      5979 A-G-------A---A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3550  4 -      4301 A-G-------A---A
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6616  2 +     16473 A-C------------
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 1
s Saimiri_boliviensis.NW_024100920.1                       1107957  4 + 121099817 a-g-------a---g
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29518  4 -     47369 A-G-------A---G
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29906  4 -     79414 A-G-------A---G
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26597  4 -     34454 A-G-------A---G
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14004  4 -     22428 A-G-------A---G
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29150  4 -     47109 A-G-------A---G
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237210  4 +   5703754 A-G-------A---G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6800  4 +     21866 A-G-------A---G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114903  4 +    313613 A-G-------A---G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24182  2 +     27374 ----------A---A
i Semnopithecus_entellus.k141_158471                     I 1 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27696  2 +     58920 ----------A---A
i Semnopithecus_hypoleucos.k141_1910531                  I 1 C 0
s Semnopithecus_johnii.k141_843753                           14192  2 -     45317 ----------A---A
i Semnopithecus_johnii.k141_843753                       I 1 C 0
s Semnopithecus_priam.k141_714795                            21851  2 -     42441 ----------A---A
i Semnopithecus_priam.k141_714795                        I 1 C 0
s Semnopithecus_schistaceus.k141_1432920                     24529  2 -     29113 ----------A---A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27603  2 -     48123 ----------A---A
i Semnopithecus_vetulus.k141_244474                      I 1 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48104  7 +     77746 A-A-------AAAAA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857223  4 -   1910179 A-G-------A---A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867228  1 +   3870691 --------------A
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5582  4 -     97271 A-G-------A---A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123826  1 +    196729 G--------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390104  4 +   1523678 A-G-------A---A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12532  4 +     22964 A-G-------A---A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1598  4 +      5583 A-T-------A---A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190508  4 +    199430 A-G-------A---A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104460  4 -    539355 A-G-------A---A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5801  4 +      6850 A-G-------A---A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5852  4 +     20590 A-G-------A---A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352066  2 - 186847797 ----------a---a
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23245  4 -     33621 a-g-------a---a
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 336
s Tolypeutes_matacus.TolMat_scaffold_31955                   18722  4 -     31044 A-G-------A---A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478578  4 -    610378 A-G-------A---A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32406  2 -     78344 ----------A---A
i Trachypithecus_crepusculus.k141_539312                 I 1 C 0
s Trachypithecus_francoisi.k141_1453105                      27356  2 -     62838 ----------A---A
i Trachypithecus_francoisi.k141_1453105                  I 1 C 0
s Trachypithecus_geei.k141_1001272                           27404  2 +     46913 ----------A---A
i Trachypithecus_geei.k141_1001272                       I 1 C 0
s Trachypithecus_germaini.k141_57262                          8213  2 -     28527 ----------A---A
i Trachypithecus_germaini.k141_57262                     I 1 C 0
s Trachypithecus_hatinhensis.k141_31479                      29295  2 -     64340 ----------A---A
i Trachypithecus_hatinhensis.k141_31479                  I 1 C 0
s Trachypithecus_laotum.k141_928651                          27332  2 -     63452 ----------A---A
i Trachypithecus_laotum.k141_928651                      I 1 C 0
s Trachypithecus_leucocephalus.k141_96450                     8775  2 +     22490 ----------A---A
i Trachypithecus_leucocephalus.k141_96450                I 1 C 0
s Trachypithecus_melamera.k141_591572                         2203  2 -      6147 ----------A---A
i Trachypithecus_melamera.k141_591572                    I 1 C 0
s Trachypithecus_obscurus.k141_848057                         9108  2 -     13050 ----------A---A
i Trachypithecus_obscurus.k141_848057                    I 1 C 0
s Trachypithecus_phayrei.ctg124                             254348  2 -   6242583 ----------A---A
i Trachypithecus_phayrei.ctg124                          I 1 C 0
s Trachypithecus_pileatus.k141_2622778                         372  2 +     19340 ----------A---A
i Trachypithecus_pileatus.k141_2622778                   I 1 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172234  1 -    200418 --------------A
i Tragulus_javanicus.TraJav_scaffold_3462                I 2 C 0
s Trichechus_manatus.JH594705.1                            6479356 11 -  10818551 a-gTATGCGTA---A
i Trichechus_manatus.JH594705.1                          I 9 C 0
s Tupaia_chinensis.KB320699.1                              1832742  4 -   4065304 A-G-------A---A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7062  4 -     70247 A-G-------A---A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360163  4 -  33153633 A-G-------A---A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    1360  4 -     21056 A-T-------A---A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180761  4 +   5085361 G-G-------A---A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24150  4 -     30710 A-G-------A---G
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23057  4 -    147434 A-G-------A---G
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75239  4 +   5488506 a-g-------a---A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103900  4 -    112863 G-G-------A---A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173004  4 -    224448 A-A-------A---A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27801  4 -     86975 G-G-------A---A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2278  4 +      2695 A-A-------A---A
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Trachypithecus_cristatus.k141_180416                       19055  0 +     25722 C
e Trachypithecus_auratus.k141_1189070                        19730  0 +     26378 C
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751  0 -    498745 C
e Equus_caballus.CM000403.2                               21373965  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041  0 -   4378816 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 41122  0 -     83289 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4397 2 +     36723 C-A
s Acomys_cahirinus.AcoCah_scaffold_21377                     18813 2 +     63021 C-A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 6
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414259 2 +  29979442 T-G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214569 2 +    347723 T-G
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16850 2 -     61208 C-A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 5
s Allenopithecus_nigroviridis.k141_3755588                   46717 2 +     53615 C-A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42678 2 +     44087 C-A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15303 2 -     21945 C-A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         16986 2 +     32033 A-A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71154 2 -     84148 C-A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43393 2 -     78289 C-A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42832 2 +     55831 C-A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41282 2 -     64179 C-A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22921 2 -     24835 C-A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39907 2 +     45454 C-A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45553 2 +     70886 C-A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7729 2 +     30854 C-A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31865 2 +     42133 C-A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584088 2 +   2318259 T-C
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      175543 2 -    412891 C-A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 523
s Antilocapra_americana.AntAmePen_scaffold_21030             49187 2 -     68529 T-A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_118258                                   49589 2 -     65372 C-A
i Aotus_azarae.k141_118258                               C 0 N 0
s Aotus_griseimembra.k141_982342                             43342 2 +     43593 C-A
i Aotus_griseimembra.k141_982342                         C 0 N 0
s Aotus_nancymaae.KZ198451.1                                671355 2 +   5030052 c-a
i Aotus_nancymaae.KZ198451.1                             C 0 I 85
s Aotus_trivirgatus.k141_192090                              22997 2 -     23494 A-A
i Aotus_trivirgatus.k141_192090                          C 0 N 0
s Aotus_vociferans.k141_944972                                8133 2 +      8415 A-A
i Aotus_vociferans.k141_944972                           C 0 N 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14886 2 -     32367 A-A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  3831 2 -     15198 T-A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 514
s Ateles_geoffroyi_b.tarseq_1536                               273616 2 +  21539123 C-A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9784 2 +     48076 C-A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4921 2 -     28759 C-A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32473 2 +     44353 C-A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47844 2 -     71267 C-A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21903 2 -     33135 C-A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5093 2 +     11645 C-A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5099 2 -     19611 C-A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955921 2 -  23207421 C-A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3130 2 -      4711 C-A
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85083 2 +    124022 T-A
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 1 C 0
s Bison_bison.KN261452.1                                     20616 2 +    288883 T-A
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003047.1                                  20355003 2 +  48749331 T-A
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                      753571 2 +   1948126 T-A
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000203.6                                   27543710 2 -  45695690 T-A
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               1528734 2 -   4408762 T-A
i Bubalus_bubalis.KI419123.1                             I 1 C 0
s Cacajao_ayresi.k141_96119                                   6803 2 +     28062 T-A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42097 2 -     91139 T-A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19623 2 +     95584 T-A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19536 2 +    119600 T-A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9089 2 +     18648 C-A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8628 2 -     13885 C-A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             696 2 -      8861 C-A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453089 2 + 189096842 C-A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                611 2 +      8664 C-A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629909 2 +  17673402 C-A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664195 2 +   7040546 C-A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207855 2 +   1652518 C-A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504274 2 +  60362399 T-G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7910 2 -     23171 T-G
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221253 2 +   9314153 T-G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614388 2 +  59632846 T-G
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105969 2 -  63665305 T-G
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407800 2 -  46296322 T-A
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 26590073 2 +  44709034 T-A
i Capra_hircus.CM004588.1                                I 1 C 0
s Capromys_pilorides.CapPil_scaffold_108409                   6915 2 +      8835 C-A
i Capromys_pilorides.CapPil_scaffold_108409              I 7 C 0
s Carlito_syrichta.NW_007259797.1                           269179 2 +    496798 C-A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               4124 2 +      5315 C-A
i Carollia_perspicillata.CarPer_scaffold_170178          C 0 I 693
s Catagonus_wagneri.CatWag_scaffold_2839                     78274 2 -    217609 C-T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994989 2 +  23392119 C-A
i Cavia_aperea.AVPZ01000300.1                            I 9 C 0
s Cavia_porcellus.DS562891.1                               4998431 2 +  23407841 c-A
i Cavia_porcellus.DS562891.1                             I 9 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61532 2 -     66877 C-A
i Cavia_tschudii.CavTsc_scaffold_23560                   I 9 C 0
s Cebuella_niveiventris.k141_592277                           4007 2 -     12580 C-A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42064 2 +     53515 C-A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369996 2 -  26074798 C-A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6885 2 -     34880 C-A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65980 2 -     89041 C-A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1110 2 -      5494 C-A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491060 2 -  27778364 C-A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17893 2 +     27315 C-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139900 2 -   4669795 c-a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43642 2 +     47900 C-A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43469 2 -     44860 C-A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43455 2 -    148725 C-A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25672 2 -     40656 C-A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5638 2 +     20796 C-A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10715 2 -     17524 C-A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26437 2 -     34525 C-A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10258 2 -     25376 C-A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362858 2 -  39242232 C-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268570 2 +  21565898 C-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30904 2 -     45857 C-A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25844 2 -     32606 C-A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2002 2 +      8499 C-A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24400 2 +     70610 C-A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21329 2 +     36323 C-A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11692 2 -     19938 T-A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29512 2 -     33796 C-A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4029 2 -     15404 C-A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7887 2 -     32913 C-A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18300 2 -     40346 C-A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18555 2 +    216457 C-A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18348 2 +     39636 C-A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237469 2 -   2543920 C-A
i Chinchilla_lanigera.JH722012.1                         I 9 C 0
s Chiropotes_albinasus.k141_1946120                           2937 2 +      5346 C-A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41432 2 -    112038 T-A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7003 2 +     34062 T-A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342220 2 +  18827391 C-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8766 2 -     44032 C-A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303544 2 - 135778131 c-a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13007 1 +     15858 --A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            604583 1 -    839153 --a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407982 2 -   2368649 c-a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377857 2 - 200372422 C-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1406 2 -     84244 C-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806117 2 +  53390261 T-A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1691 2 -      8242 T-A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41122 2 -     83289 C-A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 6
s Cricetulus_griseus.LT883664.1                          213113574 2 - 224834208 C-A
i Cricetulus_griseus.LT883664.1                          C 0 I 6
s Ctenodactylus_gundi.CteGun_scaffold_65                    643816 2 -   1526836 C-A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16457 2 +     50838 C-A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 9 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2933 2 +     36344 C-G
i Cuniculus_paca.CunPac_flattened_line_7025              I 7 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26692 2 +     75252 C-A
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 9 C 0
s Dasypus_novemcinctus.JH564415.1                          2109035 2 -   2246927 t-a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291464 2 +  12879189 C-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624250 2 -  35494412 C-A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11863573 2 -  20541912 C-A
i Desmodus_rotundus.KZ672289.1                           C 0 I 624
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663351 2 -   1390856 C-A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138137 2 -    198055 C-A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97504 2 -    115145 C-A
i Dinomys_branickii.DinBra_scaffold_10381                I 9 C 0
s Dipodomys_ordii.KN672350.1                              18949192 2 -  37912305 C-A
i Dipodomys_ordii.KN672350.1                             C 0 I 6
s Dipodomys_stephensi.DipSte_scaffold_89095                   4139 2 -     10735 C-A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 6
s Dolichotis_patagonum.DolPat_scaffold_80628                  8958 2 +     14636 C-A
i Dolichotis_patagonum.DolPat_scaffold_80628             I 9 C 0
s Echinops_telfairi.JH980293.1                            62853634 3 - 111700974 TGA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5154 2 +     19438 C-A
i Eidolon_helvum.AWHC01266696.1                          C 0 I 4
s Elaphurus_davidianus.JRFZ01104969.1                       238474 2 -    607251 T-A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107433 3 -  10337057 CAG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29849 2 +    110024 c-a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 6
s Ellobius_talpinus.LOJH01026522.1                           11824 2 +     18970 c-a
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 6
s Enhydra_lutris.KZ291758.1                               24914996 2 +  41312741 t-g
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577201 2 +  14770903 C-A
i Eptesicus_fuscus.JH977646.1                            C 0 I 523
s Erythrocebus_patas.Contig38                               261747 2 +  21539334 C-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63800 2 -    133382 C-A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4017 2 +      7672 C-A
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13637 2 -     24895 C-A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41346 2 -     70999 C-A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85308 2 +    112731 C-A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41877 2 +     68309 C-A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52203 2 -     65740 C-A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22832 2 -     75513 C-A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47029 2 -     97555 C-A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3754 2 +     30972 C-A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41474 2 -     52037 C-A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57876 2 -    111500 C-A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg3793                                     123401 2 -    137831 C-A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6946 2 +     22493 C-A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18997 2 -     32986 C-A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17957 2 +     18121 C-A
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90153 2 -     95226 T-A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33078 2 -     36801 C-A
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4700 2 -      8343 C-A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253711 2 - 186649187 c-A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     575 2 -     78134 C-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13562 2 -     40692 C-A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34964 2 +     49394 C-A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59833 2 -     66874 C-A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8706 2 -     42923 C-A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15706 2 -     53142 C-A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7907 2 +     48891 T-C
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 1 C 0
s Heterocephalus_glaber.JH602082.1                         1926107 2 -  22651954 C-A
i Heterocephalus_glaber.JH602082.1                       I 9 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6513 2 -     36432 C-A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49681 2 +     49977 C-A
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141719 2 -    630532 C-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70376 2 +    143317 T-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 9 C 0
s Hylobates_agilis.k141_1155965                               4754 2 +     12352 C-A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11938 2 +     55766 C-A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051536 2 + 191637585 C-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800414 2 +  11177569 C-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3054 2 -    135385 C-A
i Hystrix_cristata.HysCri_scaffold_5660                  I 9 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385650 2 +   7955117 C-A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1216 2 +     11955 C-A
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2037 2 -     16823 C-A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238034 2 +   9596543 C-A
i Jaculus_jaculus.JH725527.1                             C 0 I 5
s Kogia_breviceps.KogBre_flattened_line_3970                 64516 2 -     97402 C-A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42160 2 +    110728 C-A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61067 2 -     65777 C-A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 520
s Lemur_catta.scaffold_24                                 14758355 2 +  30322482 C-A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3075 2 -     13097 C-A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2829 2 +      5940 C-A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2659 2 -      5717 C-A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9024 2 -     11567 C-A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10405 2 -     12945 C-A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7884 2 +     29618 C-A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7880 2 +     31569 C-A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7890 2 +     24756 C-A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7890 2 +     16388 C-A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812408 2 -   3914936 T-G
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16734 2 +     24238 C-A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333557 2 +    662738 C-A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               331853 2 -   1826925 C-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9158 2 +     19643 T-A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042819 2 -   6120653 T-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079907 3 +  43346337 CAG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613543 2 +  59628241 T-G
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44169 2 -     61512 T-A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371831 2 -  60120075 T-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24094 2 +     30207 C-A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21197 2 -     24934 C-A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24047 2 +     30527 C-A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35223 2 -     50087 C-A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44967 2 +     51645 C-A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414170 2 - 187317192 c-a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398400 2 +  25927173 c-a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47572 2 -     62418 C-A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  110 2 +     14901 C-A
i Macaca_radiata.k141_2139468                            I 35 C 0
s Macaca_siberu.k141_2185972                                 44044 2 +     59329 C-A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269952 2 +    668171 C-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  228 2 +      1732 C-A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1750 2 +     17132 C-A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222119 2 -    270270 C-A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 4
s Mandrillus_leucophaeus.scaffold280                        321249 2 +  24302211 C-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356081 2 -    752769 C-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672434 2 -    737560 C-A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219721 2 +    317179 c-a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499871 2 +  40650429 C-A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149280 2 +    207569 T-A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25100 2 -     74585 T-G
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47926 2 -    140813 C-A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428125 2 +  29670104 C-A
i Mesocricetus_auratus.KB708134.1                        C 0 I 6
s Mesoplodon_bidens.MesBid_scaffold_6114                     80103 2 +     93471 C-A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9198 2 +     17804 C-A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9700 2 -     12984 C-A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18014 2 -     26561 C-A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983494 2 +  93316391 C-A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44673 3 +    145209 TGA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                183514 2 +    200668 C-A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 522
s Microtus_ochrogaster.CM001695.1                         15961261 2 +  27267610 c-a
i Microtus_ochrogaster.CM001695.1                        C 0 I 6
s Miniopterus_natalensis.LDJU01000034.1                    6361611 2 -   8254450 C-A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 535
s Miniopterus_schreibersii.MinSch_scaffold_23309             40512 2 -     48117 C-A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 535
s Miopithecus_ogouensis.k141_1534655                         21258 2 -     27822 C-A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7416 2 +     27589 T-G
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51283 2 -     62432 C-A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351993 2 +    437263 C-A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 177674 2 +    366855 C-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 524
s Moschus_moschiferus.MosMos_scaffold_13123                  23202 2 -     82753 T-A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          37549 2 +     47283 C-A
i Murina_feae.MurFea_scaffold_17764                      C 0 I 533
s Mus_caroli.LT608237.1                                   35591795 2 + 120012414 c-a
i Mus_caroli.LT608237.1                                  C 0 I 6
s Mus_musculus.chr8                                       41686154 2 + 129401213 c-a
i Mus_musculus.chr8                                      C 0 I 6
s Mus_pahari.LT608297.1                                   58216040 2 +  89631738 c-a
i Mus_pahari.LT608297.1                                  C 0 I 6
s Mus_spretus.CM004101.1                                  39495475 2 + 130317789 c-a
i Mus_spretus.CM004101.1                                 I 1 I 6
s Muscardinus_avellanarius.MusAve_scaffold_12866             81658 2 -     86153 C-A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354032 2 +  14710649 t-g
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9791598 2 +  10118263 C-A
i Myotis_brandtii.KE162005.1                             C 0 I 736
s Myotis_davidii.KB100139.1                                4385958 2 +   6019432 C-A
i Myotis_davidii.KB100139.1                              C 0 I 535
s Myotis_lucifugus.GL429869.1                               381777 2 +   4330536 C-A
i Myotis_lucifugus.GL429869.1                            C 0 I 536
s Myotis_myotis.MyoMyo_scaffold_66571                          606 2 +     18357 T-A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 535
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118486 2 +    130748 A-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             944948 2 +   3037898 C-A
i Nannospalax_galili.KL204047.1                          C 0 I 6
s Nasalis_larvatus.k141_1350636                              27908 2 +     34575 C-A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468011 2 -  31847680 T-G
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226162 2 -   7148211 C-A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126458 1 -    149072 --A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 453
s Nomascus_annamensis.k141_1771965                           52646 2 -    132029 C-A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8741 2 -     16345 C-A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14626 2 +     22201 C-A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412847 2 -  22158432 C-A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25024 2 -     54323 C-A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197136 2 +   9404916 T-G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635154 2 + 196305487 C-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1912 2 -      3937 C-A
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563393 2 - 199412804 C-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550099 2 -   3988456 c-a
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053125 2 -  11899542 C-A
i Octodon_degus.JH651603.1                               I 9 C 0
s Odobenus_rosmarus.KB229312.1                             1450607 2 +   2017862 T-G
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435045 2 -    630418 T-A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13037 2 +    150152 T-A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91620 2 -    140218 C-A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 6
s Onychomys_torridus.OnyTor_scaffold_28377                    2479 2 -     41509 C-A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 6
s Orcinus_orca.KB316932.1                                  8095432 2 +  10937097 C-A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12524 3 -     14239 AAA
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102570 2 - 174332312 c-a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38182 2 +    559221 T-G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38554 2 -     51505 C-A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351557 2 +   1103335 C-A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403027 2 -  44047080 T-T
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3546 2 +     17875 T-C
i Ovis_canadensis.OviCan_scaffold_67953                  I 1 C 0
s Pan_troglodytes.CM009242.2                               1471740 2 - 189151597 c-A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614469 2 +   2937107 T-A
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                   242082 2 - 183742232 c-a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8544 2 +     21308 C-A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291118 2 -  20919399 C-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21192 2 -     27687 C-A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14338 2 +     16796 C-A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21149 2 -     23640 C-A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24834 2 +     31479 C-A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17202 2 -     24908 C-A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         559 2 +      9367 C-A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 6
s Peromyscus_maniculatus.KI615324.1                         245700 2 +  18517816 c-a
i Peromyscus_maniculatus.KI615324.1                      C 0 I 6
s Petromus_typicus.PetTyp_scaffold_17301                     30948 2 -     56120 C-A
i Petromus_typicus.PetTyp_scaffold_17301                 I 9 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11290 2 -     15039 C-A
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1357 2 +     55023 C-A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          907 2 -     89929 C-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1496 2 +     40849 C-A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253160 2 +  14605196 c-a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2147 1 +     22231 --A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 519
s Pithecia_albicans.k141_1239476                             63796 2 +    207309 C-A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4889 2 -     25401 C-A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30632 2 +     58159 C-A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30908 2 +     63561 C-A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30668 2 +     51148 C-A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555638 2 -   4542175 C-A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30652 2 +     51125 C-A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3374 2 -      8168 C-A
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7055 2 +     39866 C-A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2139 2 -      9282 C-A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41543 2 -     87950 C-A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41937 2 -     88961 C-A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6635 2 -     39403 C-A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41588 2 +     87928 C-A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6632 2 -     60166 C-A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13569 2 -     67232 C-A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41485 2 -     90634 C-A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42952 2 +     89403 C-A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176864 2 - 189387572 c-A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191681 2 -   9816681 C-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26491 2 +     69807 C-A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43687 2 -     80239 C-A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981510 2 +   4620579 C-A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564977 2 -   2598838 C-A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2613 2 -      7103 C-A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3210 2 -     11706 C-A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6946 2 -     30655 C-A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33271 2 +     46564 C-A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93542 2 -     98465 C-A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7179 2 +     35169 C-A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            35499 2 +     52041 c-a
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            50556 2 -     66298 C-A
i Pteronotus_parnellii.KE847780.1                        C 0 I 525
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3599 2 -     18639 T-G
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839804 2 -  28871421 C-A
i Pteropus_alecto.KB030862.1                             C 0 I 4
s Pteropus_vampyrus.KN525825.1                             3536313 2 -   4952924 C-A
i Pteropus_vampyrus.KN525825.1                           C 0 I 4
s Pygathrix_cinerea.k141_1153803                             25865 2 +     91421 C-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152359 2 -   7812017 C-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6732 2 +     72585 C-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51964 2 +     55069 T-A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021398 2 -  90668790 c-a
i Rattus_norvegicus.chr16                                C 0 I 6
s Rhinolophus_sinicus.LVEH01000134.1                       2913698 2 +   3329780 C-A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              437 2 +      7119 C-A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121045 2 + 195417433 c-a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235287 2 -   7961872 C-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73726 2 -    116970 C-A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 4
s Saguinus_bicolor.k141_1429097                               2935 2 +     27962 C-A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2830 2 +      6077 C-A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2921 2 +      5971 C-A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2843 2 +      5932 C-A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1185 2 -      4390 C-A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390620 2 - 209938924 C-A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2792 2 +      5979 C-A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3554 2 -      4301 C-A
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6619 2 +     16473 T-A
i Saiga_tatarica.SaiTat_scaffold_39512                   I 1 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107961 2 + 121099817 c-a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29522 2 -     47369 C-A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29910 2 -     79414 C-A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26601 2 -     34454 C-A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14008 2 -     22428 C-A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29154 2 -     47109 C-A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237214 2 +   5703754 C-A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6804 2 +     21866 C-A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114907 2 +    313613 T-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24184 2 +     27374 C-A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27698 2 +     58920 C-A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14194 2 -     45317 C-A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21853 2 -     42441 C-A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24531 2 -     29113 C-A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27605 2 -     48123 C-A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48111 2 +     77746 A-A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 6
s Solenodon_paradoxus.SolPar_flattened_line_126            1857227 2 -   1910179 T-A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867229 2 +   3870691 C-A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5586 2 -     97271 T-G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390108 2 +   1523678 C-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                12536 2 +     22964 C-A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 531
s Tamandua_tetradactyla.TamTet_scaffold_224794                1602 2 +      5583 A-A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190512 2 +    199430 C-A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104464 2 -    539355 C-A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5805 2 +      6850 C-A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5856 2 +     20590 C-A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352068 2 - 186847797 c-a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23585 2 -     33621 C-A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 336 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18726 2 -     31044 T-A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    478582 2 -    610378 C-A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 527
s Trachypithecus_auratus.k141_1189070                        19730 2 +     26378 C-A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32408 2 -     78344 C-A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19055 2 +     25722 C-A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27358 2 -     62838 C-A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27406 2 +     46913 C-A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8215 2 -     28527 C-A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29297 2 -     64340 C-A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27334 2 -     63452 C-A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8777 2 +     22490 C-A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2205 2 -      6147 C-A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9110 2 -     13050 C-A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254350 2 -   6242583 C-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         374 2 +     19340 C-A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172235 2 -    200418 C-A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479367 3 -  10818551 CGG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832746 2 -   4065304 C-A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7066 2 -     70247 C-A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360167 2 -  33153633 C-A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    1364 2 -     21056 C-T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180765 2 +   5085361 T-G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24154 2 -     30710 C-A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23061 2 -    147434 C-A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75243 2 +   5488506 C-A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103904 2 -    112863 T-G
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173008 2 -    224448 C-A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_17732         27805 2 -     86975 T-G
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2282 2 +      2695 C-A
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 6
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             123827 0 +    196729 C
e Puma_concolor.QAVW01001104.1                            18097990 0 +  38429054 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13989 0 +     78924 C
e Panthera_tigris.KE722367.1                               3971396 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18460676 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   23350 0 -    230217 C
e Mungos_mungo.MunMun_flattened_line_18455                   17420 0 -     63510 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  68586 0 +     83186 C
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Helogale_parvula.HelPar_flattened_line_2585                29667 0 -    327341 C
e Felis_nigripes.FelNig_flattened_line_31944                 26529 0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185115427 0 - 205367284 C
e Equus_przewalskii.KK951119.1                              410751 0 -    498745 C
e Equus_caballus.CM000403.2                               21373965 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041 0 -   4378816 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              3190 0 +     87169 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Acinonyx_jubatus.LLWD01001279.1                           811729 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4399 19 +     36723 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
s Acinonyx_jubatus.LLWD01001279.1                           811729 18 +   1699592 ------------------------------A-GTCC-TT--T----A-A-CA--A-----TA---GGC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18821  7 +     63021 -------------------------------------TT--T----C-------ACA-----------
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 6 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414261 19 +  29979442 G-----------------------------G-GTCC-TT--T----A-A-CA--G-----TA---TGC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214571 19 +    347723 G-----------------------------G-GTCC-TT--T----A-A-CA--A-----TA---TGC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16857 13 -     61208 -------------------------------------GT--T----A-------ACAG--TA---TGT
i Allactaga_bullata.AllBul_scaffold_20030                I 5 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46719 13 +     53615 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Allenopithecus_nigroviridis.k141_3755588               C 0 I 2
s Allochrocebus_lhoesti.k141_441277                          42680 13 +     44087 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Allochrocebus_lhoesti.k141_441277                      C 0 I 2
s Allochrocebus_preussi.k141_1993939                         15305 13 -     21945 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Allochrocebus_preussi.k141_1993939                     C 0 I 2
s Allochrocebus_solatus.k141_3554717                         16988 13 +     32033 A-----------------------------G-GTTA-AT--T----A-------TAA-----------
i Allochrocebus_solatus.k141_3554717                     C 0 I 2
s Alouatta_belzebul.k141_1011583                             71156 18 -     84148 ------------------------------G-GTTC-GT--T----A-------ACAA--TA---TGC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43395 18 -     78289 ------------------------------G-GTTC-GT--T----A-------ACAA--TA---TGC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42834 18 +     55831 ------------------------------G-GTTC-GT--T----A-------ACAA--TA---TGC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41284 18 -     64179 ------------------------------G-GTTC-GT--T----A-------ACAA--TA---TGC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22923 18 -     24835 ------------------------------G-GTTC-GT--T----A-------ACAA--TA---TGC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39909 18 +     45454 ------------------------------G-GTTC-GT--T----A-------ACAA--TA---TGC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45555 18 +     70886 ------------------------------G-GTTC-GT--T----A-------ACAA--TA---TGC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7731 18 +     30854 ------------------------------G-GTTC-GT--T----A-------ACAA--TA---TGC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31867 18 +     42133 ------------------------------G-GTTC-GT--T----A-------ACAA--TA---TGC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584090 19 +   2318259 A-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176068 20 -    412891 G-----------------------------GGGCCC-AT--G----G-A---CGA-----CA---GGC
i Anoura_caudifer.AnoCau_scaffold_1412                   I 523 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49189 19 -     68529 G-----------------------------G-GTCC-TT--C----A-A-CA--G-----TA---TGC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     122  6 +     17741 ---------------------------------------------------------A--TA---TGC
i Aotus_azarae.k141_887050                               N 0 C 0
s Aotus_griseimembra.k141_3192254                              737 16 -     15923 ---------------------------------TTC-AT--T----A-------ACA-AT-A---TGC
i Aotus_griseimembra.k141_3192254                        N 0 C 0
s Aotus_nancymaae.KZ198451.1                                671442  6 +   5030052 ---------------------------------------------------------c--ta---tac
i Aotus_nancymaae.KZ198451.1                             I 85 I 66
s Aotus_trivirgatus.k141_318729                               1023  5 -     16391 ------------------------------------------------------------TA---TGC
i Aotus_trivirgatus.k141_318729                          N 0 C 0
s Aotus_vociferans.k141_1514463                                572 16 -     17186 ---------------------------------TTC-AT--T----A-------AGA-AT-A---TGC
i Aotus_vociferans.k141_1514463                          N 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14888 19 -     32367 A-----------------------------G-TTTA-TT--T----A-------ACGA--TG---TGC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4347 20 -     15198 G-----------------------------GGGCCC-TG--G----G-A-CA--A-----TA---GGC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 514 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273618 18 +  21539123 ------------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9786 18 +     48076 ------------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4923 18 -     28759 ------------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32475 18 +     44353 ------------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47846 18 -     71267 ------------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21905 18 -     33135 ------------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5095 19 +     11645 A-----------------------------G-GTCC-TT--T----A-------ATAA--TA---TGC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5101 19 -     19611 A-----------------------------G-GTCC-TT--T----A-------ATAA--TA---TGC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955923 19 -  23207421 G-----------------------------G-GTCC-TT--C----A-A-CA--A-----TA---TGC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3132 19 -      4711 G-----------------------------G-GTCC-TT--C----A-A-CA--A-----TA---TGC
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85085 19 +    124022 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20618 19 +    288883 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----Ta---tgc
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355005 19 +  48749331 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753573 19 +   1948126 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543712 19 -  45695690 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528736 19 -   4408762 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6805 19 +     28062 A-----------------------------G-GTTT-AT--T----A-------ACAA--TA---TGC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42099 19 -     91139 A-----------------------------G-GTTT-AT--T----A-------ACAA--TA---TGC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19625 19 +     95584 A-----------------------------G-GTTT-AT--T----A-------ACAA--TA---TGC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19538 19 +    119600 A-----------------------------G-GTTT-AT--T----A-------ACAA--TA---TGC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9091 19 +     18648 A-----------------------------A-GTTT-AT--T----A-------ACTA--TA---TGC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8630 19 -     13885 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             698 19 -      8861 G-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453091 19 + 189096842 G-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                613 19 +      8664 G-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629911 19 +  17673402 G-----------------------------G-GTCC-TT--C----A-A---caa-----ta---tgc
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664197 19 +   7040546 A-----------------------------G-GTCC-TT--C----A-A-CA--A-----TA---TGC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207857 19 +   1652518 G-----------------------------G-GTCC-TT--C----A-A---caa-----ta---tgc
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504276 19 +  60362399 G-----------------------------G-GTCC-TT--T----A-A-CA--A-----TA---TGT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7912 19 -     23171 G-----------------------------G-GTCC-TT--T----A-A-CA--A-----TA---TGT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221255 19 +   9314153 G-----------------------------G-GTCC-TT--T----A-A-CA--A-----TA---TGT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614390 19 +  59632846 G-----------------------------G-GTCC-TT--T----A-A-CA--A-----TA---TGT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105971 19 -  63665305 G-----------------------------G-GTCC-TT--T----A-A-CA--A-----TA---TGT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407802 19 -  46296322 A-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590075 19 +  44709034 A-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_108409                   6917 16 +      8835 G-----------------------------G-TC----C--T----A-------TCAG--TG---TGC
i Capromys_pilorides.CapPil_scaffold_108409              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269181 19 +    496798 A-----------------------------A-GTCC-TT--T----A-------ATag--ga---tac
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                282 20 -      1021 G-----------------------------GGGCCC-TT--G----G-A-CA--G-----TA---GGC
i Carollia_perspicillata.CarPer_scaffold_668536          n 693 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78276 21 -    217609 G-----------------------------A-GTCC-TT--TT--CA--GCA--A-----TA---TGC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4994991 16 +  23392119 G-----------------------------G-TC----C--T----C-------TCAG--TA---TGC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998433 16 +  23407841 G-----------------------------G-TC----C--T----C-------TCAG--TA---TGC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61534 16 -     66877 G-----------------------------G-TC----C--T----C-------TCAG--TA---TGC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4009 19 -     12580 A-----------------------------A-GTTC-AT--T----A-------ACTA--TA---TGC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42066 19 +     53515 A-----------------------------A-GTTC-AT--T----A-------ACTA--TA---TGC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  369998 19 -  26074798 A-----------------------------G-GTTC-AT--T----C-------ACAA--TA---TGC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6887 19 -     34880 A-----------------------------G-GTTC-AT--T----C-------ACAA--TA---TGC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                65982 19 -     89041 A-----------------------------G-GTTC-AT--T----C-------ACAA--TA---TGC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1112 19 -      5494 A-----------------------------A-GTTC-TT--T----A-------ATAG--GA---TAC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491062 19 -  27778364 G-----------------------------G-GTCC-TT--T----G-A-CA--A-----TA---TGC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17895 19 +     27315 G-----------------------------G-GTCC-TT--T----G-A-CA--A-----TA---TGC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139902 13 -   4669795 a-----------------------------g-gtTC-AT--T----A-------TCA-----------
i Cercocebus_atys.KQ010504.1                             C 0 I 2
s Cercocebus_chrysogaster.k141_1522556                       43644 13 +     47900 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Cercocebus_chrysogaster.k141_1522556                   C 0 I 2
s Cercocebus_lunulatus.k141_2779015                          43471 13 -     44860 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Cercocebus_lunulatus.k141_2779015                      C 0 I 2
s Cercocebus_torquatus.k141_2159127                          43457 13 -    148725 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Cercocebus_torquatus.k141_2159127                      C 0 I 2
s Cercopithecus_ascanius.k141_3120866                        25674 13 -     40656 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Cercopithecus_ascanius.k141_3120866                    C 0 I 2
s Cercopithecus_cephus.k141_4183004                           5640 13 +     20796 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Cercopithecus_cephus.k141_4183004                      C 0 I 2
s Cercopithecus_diana.k141_132293                            10717 13 -     17524 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Cercopithecus_diana.k141_132293                        C 0 I 2
s Cercopithecus_hamlyni.k141_566925                          26439 13 -     34525 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Cercopithecus_hamlyni.k141_566925                      C 0 I 2
s Cercopithecus_lowei.k141_2101310                           10260 13 -     25376 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Cercopithecus_lowei.k141_2101310                       C 0 I 2
s Cercopithecus_albogularis.ctg5                                  362860 13 -  39242232 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Cercopithecus_albogularis.ctg5                               C 0 I 2
s Cercopithecus_mona.ctg39                                  268572 13 +  21565898 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Cercopithecus_mona.ctg39                               C 0 I 2
s Cercopithecus_neglectus.k141_858615                        30906 13 -     45857 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Cercopithecus_neglectus.k141_858615                    C 0 I 2
s Cercopithecus_nictitans.k141_2995370                       25846 13 -     32606 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Cercopithecus_nictitans.k141_2995370                   C 0 I 2
s Cercopithecus_petaurista.k141_42573                         2004 13 +      8499 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Cercopithecus_petaurista.k141_42573                    C 0 I 2
s Cercopithecus_pogonias.k141_6079                           24402 13 +     70610 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Cercopithecus_pogonias.k141_6079                       C 0 I 2
s Cercopithecus_roloway.k141_3012935                         21331 13 +     36323 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Cercopithecus_roloway.k141_3012935                     C 0 I 2
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11694 18 -     19938 G-----------------------------T-GTCC-TT--T----A-------A-AA--TA---TTT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29514 19 -     33796 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TGC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4031 19 -     15404 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TGC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7889 19 -     32913 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18302 19 -     40346 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18557 19 +    216457 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18350 19 +     39636 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237471 16 -   2543920 T-----------------------------A-TC----C--T----C-------TCAG--TA---TGC
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2939 19 +      5346 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41434 19 -    112038 A-----------------------------G-GTTT-AT--T----A-------ACAA--TA---TGC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7005 19 +     34062 A-----------------------------G-GTTT-AT--T----A-------ACAA--TA---AGC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342222 13 +  18827391 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Chlorocebus_aethiops.ctg25                             C 0 I 2
s Chlorocebus_pygerythrus.k141_3063162                        8768 13 -     44032 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Chlorocebus_pygerythrus.k141_3063162                   C 0 I 2
s Chlorocebus_sabaeus.CM001947.1                            303546 13 - 135778131 a-----------------------------g-gtTC-AT--T----A-------TCA-----------
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 2
s Choloepus_didactylus.ChoDid_scaffold_70559                 13008 20 +     15858 A-----------------------------T-GTCC-TTATA----A-------A-AA--TA---TTC
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            604584 20 -    839153 a-----------------------------t-gtcc-ttata----a-------a-aa--ta---ttc
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407984 13 -   2368649 a-----------------------------g-gttc-AT--T----A-------TCA-----------
i Colobus_angolensis.KN981557.1                          C 0 I 2
s Colobus_guereza.LG01                                      377859 13 - 200372422 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Colobus_guereza.LG01                                   C 0 I 2
s Colobus_polykomos.k141_906115                               1408 13 -     84244 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Colobus_polykomos.k141_906115                          C 0 I 2
s Condylura_cristata.JH655891.1                           35806119 20 +  53390261 G-----------------------------G-GTCC-TT--CTTATG-------A-----TA---CGT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1693 18 -      8242 G-----------------------------G-GT-C-TT--T----A-A--A-AA-----AA---TAC
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41130 13 -     83289 -------------------------------------TT--T----C-------ACGA--TA---TGT
i Cricetomys_gambianus.CriGam_scaffold_14425             I 6 C 0
s Cricetulus_griseus.LT883664.1                          213113582 13 - 224834208 -------------------------------------TT--T----C-------ACAA--TA---TGT
i Cricetulus_griseus.LT883664.1                          I 6 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3190 18 +     87169 ------------------------------G-GTCC-TT--T----A-A-CA--A-----TA---TGC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643818 16 -   1526836 G-----------------------------G-TT----T--T----C-------TGAA--CA---TGC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16459 15 +     50838 G-----------------------------G-TC----T--T----T-------TCAG--TA---T-T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2935 16 +     36344 G-----------------------------G-AC----C--T----C-------TCAG--TA---TGC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26694 16 +     75252 G-----------------------------G-TC----C--T----C-------TCAG--TA---TGC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109037 18 -   2246927 g-----------------------------t-gtcc-tt--t----a-------a-aa--ta---ttt
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291466 19 +  12879189 A-----------------------------G-GCCC-TT--T----A-------ACAA--TA---TGC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624252 19 -  35494412 A-----------------------------G-GTCC-TT--C----A-A-CA--A-----TA---TGC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.PEHR01003915.1                             124 19 +       233 G-----------------------------G-GCCC-TT--G----G-A-CA--C-----GA---GGC
i Desmodus_rotundus.PEHR01003915.1                       n 624 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663353 19 -   1390856 G-----------------------------A-GTCC-TT--T----A-A-CA--A-----TA---TGC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138139 19 -    198055 G-----------------------------G-GTCC-TT--T----G-A-CA--A-----TA---TGT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97506 16 -    115145 G-----------------------------G-TC----C--T----C-------CAAG--TA---TGC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949200 13 -  37912305 -------------------------------------TT--T----A-------ACAA--TA---TAA
i Dipodomys_ordii.KN672350.1                             I 6 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4147 13 -     10735 -------------------------------------TT--T----A-------ACAA--TA---TAA
i Dipodomys_stephensi.DipSte_scaffold_89095              I 6 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8960 16 +     14636 G-----------------------------G-TC----C--T----C-------TCAG--TA---TGC
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853637 19 - 111700974 G-----------------------------T-TCCT-TT--T----A-------ATAA--TA---TGT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5160 11 +     19438 -----------------------------------------T----A----acaa-----ta---tgc
i Eidolon_helvum.AWHC01266696.1                          I 4 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238476 19 -    607251 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107436 19 -  10337057 G-----------------------------T-GTCC-TT--T----A-------CAAA--TA---GCT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29857 13 +    110024 -------------------------------------TT--T----C-------ACAA--TA---TGT
i Ellobius_lutescens.LOEQ01008920.1                      I 6 C 0
s Ellobius_talpinus.LOJH01026522.1                           11832 13 +     18970 -------------------------------------TT--T----C-------ACAA--TA---CGT
i Ellobius_talpinus.LOJH01026522.1                       I 6 C 0
s Enhydra_lutris.KZ291758.1                               24914998 19 +  41312741 g-----------------------------g-gtCC-TT--T----A-A-CA--A-----TA---TGC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577726 15 +  14770903 -----------------------------------------A----ACAGTATAA-----TA---TGC
i Eptesicus_fuscus.JH977646.1                            I 523 C 0
s Erythrocebus_patas.Contig38                               261749 13 +  21539334 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Erythrocebus_patas.Contig38                            C 0 I 2
s Eschrichtius_robustus.EscRob_flattened_line_8968           63802 19 -    133382 G-----------------------------G-GTCC-TT--C----A-A-CA--A-----TA---TGC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4019 19 +      7672 G-----------------------------G-GTCC-TT--C----A-A-CA--A-----TA---TGC
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13639 19 -     24895 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41348 19 -     70999 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85310 19 +    112731 A-----------------------------G-GTCA-TT--T----A-------AGAA--TA---TGC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41879 19 +     68309 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52205 19 -     65740 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22834 19 -     75513 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47031 19 -     97555 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3756 19 +     30972 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41476 19 -     52037 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57878 19 -    111500 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245642 18 - 206538554 ------------------------------A-GTCC-TT--T----A-A-CA--A-----TA---TGC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115427 18 - 205367284 ------------------------------A-GTCC-TT--T----A-A-CA--A-----TA---TGC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26529 18 -     30238 ------------------------------A-GTCC-TT--T----A-A-CA--A-----TA---TGC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123403 19 -    137831 A-----------------------------T-GTCC-TG--T----A-------ACAA--TA---TGC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6948 19 +     22493 A-----------------------------T-GTCC-TG--T----A-------ACAA--TA---TGC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            18999 19 -     32986 A-----------------------------T-GTCC-TT--T----A-------ACAA--TA---TGC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17959 19 +     18121 A-----------------------------G-GTCC-TT--T----A-------ACAA--TG---TGC
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90155 19 -     95226 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33080 18 -     36801 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TA-
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4702 19 -      8343 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253713 19 - 186649187 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     577 18 -     78134 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TC-
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13564 19 -     40692 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34966 19 +     49394 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59835 19 -     66874 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8708 19 -     42923 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15708 19 -     53142 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29667 18 -    327341 ------------------------------G-GTCC-TT--T----C-A-CA--A-----TA---TGT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7909 19 +     48891 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1926109 16 -  22651954 G-----------------------------G-TC----C--T----C-------TC-----AGTATGG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                5849 18 +      6687 ------------------------------g-GTCG-TT--T----A-------ATAA--TA---TGT
i Heterohyrax_brucei.HetBruBak_scaffold_128297           N 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6515 19 -     36432 G-----------------------------A-GTCC-TT--C----A-A-CA--A-----TA---TGC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49683 19 +     49977 G-----------------------------G-GT-CATT--T----A-A-CA--A-----TA---TGT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141721 19 -    630532 G-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68586 18 +     83186 ------------------------------G-GTCC-TT--T----A-A-CA--A-----TA---TGC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70378 16 +    143317 G-----------------------------G-TC----C--T----C-------TCAG--GA---TGC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4756 19 +     12352 G-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11940 19 +     55766 G-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051538 19 + 191637585 C-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800416 19 +  11177569 C-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3056 16 -    135385 G-----------------------------C-TC----C--T----C-------TCAA--TA---TGT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385652 19 +   7955117 A-----------------------------G-TTTC-TT--T----A-------ATAA--TA---TGT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1218 19 +     11955 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TGC
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2039 19 -     16823 G-----------------------------G-GTCC-TT--C----A-A-CA--A-----TA---TGC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238041 13 +   9596543 -------------------------------------GT--T----A-------TCAA--TA---TGT
i Jaculus_jaculus.JH725527.1                             I 5 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64518 19 -     97402 G-----------------------------G-GTCC-TT--C----A-A-CA--A-----TA---TGC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42162 18 +    110728 ------------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61589 15 -     65777 -----------------------------------------A----GCAGGATAA-----TA---TGC
i Lasiurus_borealis.LasBor_scaffold_16567                I 520 C 0
s Lemur_catta.scaffold_24                                 14758357 19 +  30322482 A-----------------------------G-GTCA-TT--T----A-------ACAA--CA---TGC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3077 19 -     13097 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2831 19 +      5940 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2661 19 -      5717 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9026 19 -     11567 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10407 19 -     12945 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7886 19 +     29618 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TGC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7882 19 +     31569 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TGC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7892 19 +     24756 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TGC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7892 19 +     16388 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TGC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812410 19 -   3914936 G-----------------------------T-GTCC-TT--T----A-A-TA--A-----TA---TGC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16736 19 +     24238 A-----------------------------G-GTCC-TT--T----A-------ACAA--TG---TGC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333559 19 +    662738 G-----------------------------G-GTCC-TT--C----A-A-CA--A-----TA---CGC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               331855 13 -   1826925 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Lophocebus_aterrimus.ctg367                            C 0 I 2
s Loris_lydekkerianus.k141_2031736                            9160 19 +     19643 A-----------------------------T-GTCC-TT--T----A-------ATGA--TA---TGC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042821 19 -   6120653 A-----------------------------T-GTCC-TT--T----A-------ATGA--TA---TGC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079910 19 +  43346337 G-----------------------------G-GTCC-TT--T----A-------ATGA--CA---TGT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613545 19 +  59628241 G-----------------------------G-GTCC-TT--T----A-A-CA--A-----TA---TGT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44171 13 -     61512 A-----------------------------A-GTTC-AT--T----A-------TCA-----------
i Macaca_arctoides.k141_1757516                          C 0 I 2
s Macaca_assamensis.Contig5                                 371833 13 -  60120075 A-----------------------------A-GTTC-AT--T----A-------TCA-----------
i Macaca_assamensis.Contig5                              C 0 I 2
s Macaca_cyclopis.k119_263443                                24096 13 +     30207 A-----------------------------A-GTTC-AT--T----A-------TCA-----------
i Macaca_cyclopis.k119_263443                            C 0 I 2
s Macaca_fascicularis.k141_1397292                           21199 13 -     24934 A-----------------------------A-GTTC-AT--T----A-------TCA-----------
i Macaca_fascicularis.k141_1397292                       C 0 I 2
s Macaca_fuscata.k119_546792                                 24049 13 +     30527 A-----------------------------A-GTTC-AT--T----A-------TCA-----------
i Macaca_fuscata.k119_546792                             C 0 I 2
s Macaca_leonina.k141_321385                                 35225 13 -     50087 A-----------------------------A-GTTC-AT--T----A-------TCA-----------
i Macaca_leonina.k141_321385                             C 0 I 2
s Macaca_maura.k141_1103459                                  44969 13 +     51645 A-----------------------------A-GTTC-AT--T----A-------TCA-----------
i Macaca_maura.k141_1103459                              C 0 I 2
s Macaca_mulatta.NC_041758.1                                414172 13 - 187317192 a-----------------------------a-gttC-AT--T----A-------TCA-----------
i Macaca_mulatta.NC_041758.1                             C 0 I 2
s Macaca_nemestrina.KQ007038.1                              398402 13 +  25927173 a-----------------------------a-gttC-AT--T----A-------TCA-----------
i Macaca_nemestrina.KQ007038.1                           C 0 I 2
s Macaca_nigra.k141_2818840                                  47574 13 -     62418 A-----------------------------A-GTTC-AT--T----A-------TCA-----------
i Macaca_nigra.k141_2818840                              C 0 I 2
s Macaca_radiata.k141_2139468                                  112 13 +     14901 A-----------------------------A-GTTC-AT--T----A-------TCA-----------
i Macaca_radiata.k141_2139468                            C 0 I 2
s Macaca_siberu.k141_2185972                                 44046 13 +     59329 A-----------------------------A-GTTC-AT--T----A-------TCA-----------
i Macaca_siberu.k141_2185972                             C 0 I 2
s Macaca_silenus.Contig273                                  269954 13 +    668171 A-----------------------------A-GTTC-AT--T----A-------TCA-----------
i Macaca_silenus.Contig273                               C 0 I 2
s Macaca_thibetana.k99_503078                                  230 13 +      1732 A-----------------------------A-GTTC-AT--T----A-------TCA-----------
i Macaca_thibetana.k99_503078                            C 0 I 2
s Macaca_tonkeana.k141_339739                                 1752 13 +     17132 A-----------------------------A-GTTC-AT--T----A-------TCA-----------
i Macaca_tonkeana.k141_339739                            C 0 I 2
s Macroglossus_sobrinus.MacSob_scaffold_4024                222125 11 -    270270 -----------------------------------------T----A-A-CA--A-----TA---TGC
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 4 C 0
s Mandrillus_leucophaeus.scaffold280                        321251 13 +  24302211 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Mandrillus_leucophaeus.scaffold280                     C 0 I 2
s Mandrillus_sphinx.Contig270                               356083 13 -    752769 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Mandrillus_sphinx.Contig270                            C 0 I 2
s Manis_javanica.JSZB01003497.1                             672436 18 -    737560 G-----------------------------A-GTCC-T---T----A-A-CA--A-----TA---TGC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219723 18 +    317179 g-----------------------------a-gtCC-T---T----A-A-CA--A-----TA---TGC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499873 19 +  40650429 A-----------------------------G-TTTC-TT--T----A-------ACAA--TA---TGC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149282 19 +    207569 G-----------------------------A-GT-CCTT--T----A-A-CA--A-----TA---TAC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25102 19 -     74585 G-----------------------------G-GTCC-TT--T----A-A-CA--C-----TA---TGC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428133 12 +  29670104 -------------------------------------TT--T----C-------ACAA--TG---AG-
i Mesocricetus_auratus.KB708134.1                        I 6 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47928  6 -    140813 A--------------------------GGTC-C-----------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 7
s Mesoplodon_bidens.MesBid_scaffold_6114                     80105 19 +     93471 G-----------------------------G-GTCC-TT--C----A-A-CA--A-----TA---TGC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9200 19 +     17804 A-----------------------------A-GTTC-AT--T----A-------ACTA--TA---TGC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9702 19 -     12984 A-----------------------------A-GTTC-AT--T----A-------ACTA--TA---TGC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18016 19 -     26561 A-----------------------------A-GTTC-AT--T----A-------ACTA--TA---TGC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983496 19 +  93316391 A-----------------------------G-GCCC-TT--T----A-------ACAA--TA---TGC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44676 18 +    145209 G-----------------------------T-TCCT--T--T----A-------ATAA--TA---TGT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184038 19 +    200668 G-----------------------------G-GCCC-GT--G----G--GCA--A-----TA---GGC
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 522 C 0
s Microtus_ochrogaster.CM001695.1                         15961269 13 +  27267610 -------------------------------------TT--T----C-------ACAC--TA---TGT
i Microtus_ochrogaster.CM001695.1                        I 6 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362148 11 -   8254450 -----------------------------------------T----A-A-CA--A-----TA---TGC
i Miniopterus_natalensis.LDJU01000034.1                  I 535 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41049 11 -     48117 -----------------------------------------T----A-A-CA--A-----TA---TGC
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 535 C 0
s Miopithecus_ogouensis.k141_1534655                         21260 13 -     27822 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Miopithecus_ogouensis.k141_1534655                     C 0 I 2
s Mirounga_angustirostris.MirAng_flattened_line_54046         7418 19 +     27589 G-----------------------------T-GTCC-TT--T----A-A-TA--A-----TA---TGC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51285 19 -     62432 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TGC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   351995 19 +    437263 A-----------------------------G-GTCC-TT--C----A-A-CA--A-----TA---TGC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178200 19 +    366855 G-----------------------------G-GCCC-TT--T----A-A---CGA-----TA---TGC
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 524 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23204 19 -     82753 G-----------------------------G-GCCC-TT--C----C-A-CA--A-----TA---TGC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17420 18 -     63510 ------------------------------G-GTCC-TT--T----C-A-CA--A-----TA---TGC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38084 15 +     47283 -----------------------------------------A----ACAGTATGA-----TA---TAC
i Murina_feae.MurFea_scaffold_17764                      I 533 C 0
s Mus_caroli.LT608237.1                                   35591803 13 + 120012414 -------------------------------------TT--T----T-------ACAA--TG---TGT
i Mus_caroli.LT608237.1                                  I 6 C 0
s Mus_musculus.chr8                                       41686162 13 + 129401213 -------------------------------------TT--T----T-------ACAA--TG---TGT
i Mus_musculus.chr8                                      I 6 C 0
s Mus_pahari.LT608297.1                                   58216048 13 +  89631738 -------------------------------------TT--T----T-------ACAA--TG---TGT
i Mus_pahari.LT608297.1                                  I 6 C 0
s Mus_spretus.CM004101.1                                  39495483 13 + 130317789 -------------------------------------TT--T----G-------ACAA--TG---TGT
i Mus_spretus.CM004101.1                                 I 6 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81660 18 -     86153 A-----------------------------G-TTTC-TT--T----A-------ACAA--TA---TA-
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354034 19 +  14710649 g-----------------------------g-gTCC-TT--T----A-A-CA--A-----TA---TGC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792336 15 +  10118263 -----------------------------------------A----ACAGTATAA-----TA---TGC
i Myotis_brandtii.KE162005.1                             I 736 C 0
s Myotis_davidii.KB100139.1                                4386495 15 +   6019432 -----------------------------------------A----ACAGTATAA-----TA---TGC
i Myotis_davidii.KB100139.1                              I 535 C 0
s Myotis_lucifugus.GL429869.1                               382315 15 +   4330536 -----------------------------------------A----ACAGTATAA-----TA---TGC
i Myotis_lucifugus.GL429869.1                            I 536 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1143 15 +     18357 -----------------------------------------A----ACAGTATAA-----TA---TGC
i Myotis_myotis.MyoMyo_scaffold_66571                    I 535 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118488 18 +    130748 A-----------------------------C-ATCC-TT--T----A-------A-AA--TA---TTT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             944956  7 +   3037898 -------------------------------------TT--T----A-------ACA-----------
i Nannospalax_galili.KL204047.1                          I 6 C 0
s Nasalis_larvatus.k141_1350636                              27910 13 +     34575 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Nasalis_larvatus.k141_1350636                          C 0 I 2
s Neomonachus_schauinslandi.NINY01007730.1                11468013 19 -  31847680 G-----------------------------T-GTCC-TT--T----A-A-TA--A-----TA---TGC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226164 19 -   7148211 G-----------------------------G-GTCC-TT--C----A-A-CA--A-----TA---TGC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126912 18 -    149072 A-----------------------------A-GTCC-TG--T----A-A-CA--A-----T----TGC
i Noctilio_leporinus.NocLep_scaffold_7894                I 453 C 0
s Nomascus_annamensis.k141_1771965                           52648 19 -    132029 G-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8743 19 -     16345 G-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14628 19 +     22201 G-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412849 19 -  22158432 G-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25026 19 -     54323 G-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197138 19 +   9404916 G-----------------------------G-GTCC-TT--T----A-A-CA--A-----TA---TGT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635156 19 + 196305487 A-----------------------------T-GTCC-TT--T----A-------ATGA--TA---TGC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1914 19 -      3937 A-----------------------------T-GTCC-TT--T----A-------ATGA--TA---TGC
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563395 19 - 199412804 A-----------------------------T-GTCC-TT--T----A-------ATGA--TA---TGC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550101 19 -   3988456 a-----------------------------G-GTCC-TT--T----A-------ACAA--TG---TGC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053127 16 -  11899542 G-----------------------------G-TC----C--T----T-------TCAG--TA---TTT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450609 19 +   2017862 G-----------------------------T-GTCC-TT--T----A-A-TA--A-----TA---TGC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435047 19 -    630418 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13039 19 +    150152 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91628 13 -    140218 -------------------------------------TT--T----C-------ACAA--TA---CGT
i Ondatra_zibethicus.OndZib_scaffold_7387                I 6 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2487 13 -     41509 -------------------------------------TT--T----C-------ACAA--TA---TGT
i Onychomys_torridus.OnyTor_scaffold_28377               I 6 C 0
s Orcinus_orca.KB316932.1                                  8095434 19 +  10937097 G-----------------------------G-GTCC-TT--C----A-A-CA--A-----TA---TGC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12527 19 -     14239 G-----------------------------G-GTCC-TT--T----A-------ATAA--TA---TGT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102572 19 - 174332312 a-----------------------------g-gtcc-tT--T----A-------ACAA--TG---TGC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38184 19 +    559221 G-----------------------------G-GTCC-TT--T----A-A-CA--A-----TA---TGT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38556 19 -     51505 A-----------------------------T-GTCC-TG--T----A-------ACAA--TA---TGC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351559 19 +   1103335 A-----------------------------T-GTCC-TG--T----A-------ACAA--TA---TGC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403029 19 -  44047080 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3548 19 +     17875 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471742 19 - 189151597 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Pan_troglodytes.CM009242.2                             C 0 I 15
s Panthera_onca.PanOnc_flattened_line_3271                   23350 18 -    230217 ------------------------------A-GTCC-TT--T----A-A-CA--A-----TA---TGC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460676 18 -  18783137 ------------------------------A-GTCC-TT--T----A-A-CA--A-----TA---TGC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971396 18 +   8748460 ------------------------------A-GTCC-TT--T----A-A-CA--A-----TA---TGC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614471 19 +   2937107 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242084 13 - 183742232 a-----------------------------g-gtTC-AT--T----A-------TCA-----------
i Papio_anubis.CM001495.2                                C 0 I 2
s Papio_cynocephalus.k141_1507553                             8546 13 +     21308 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Papio_cynocephalus.k141_1507553                        C 0 I 2
s Papio_hamadryas.Contig39                                  291120 13 -  20919399 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Papio_hamadryas.Contig39                               C 0 I 2
s Papio_kindae.k141_2214839                                  21194 13 -     27687 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Papio_kindae.k141_2214839                              C 0 I 2
s Papio_papio.k141_799093                                    14340 13 +     16796 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Papio_papio.k141_799093                                C 0 I 2
s Papio_ursinus.k141_2278143                                 21151 13 -     23640 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Papio_ursinus.k141_2278143                             C 0 I 2
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     13989 18 +     78924 ------------------------------G-GTCC-TT--T----A-AG-A--A-----TA---TGC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24836 19 +     31479 A-----------------------------T-GTCC-TT--T----A-------ACAA--TA---TGC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17204 19 -     24908 A-----------------------------T-GTCC-TT--T----A-------ACAA--TA---TGC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         567 10 +      9367 -------------------------------------TT--T----A-------ACAA--TA------
i Perognathus_longimembris.PerPac_flattened_line_89005   I 6 C 0
s Peromyscus_maniculatus.KI615324.1                         245708 13 +  18517816 -------------------------------------TT--T----C-------ACAA--TA---TGT
i Peromyscus_maniculatus.KI615324.1                      I 6 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30950 13 -     56120 A-----------------------------G-TC----C--T----G-------TC-----A---TGC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11292 19 -     15039 G-----------------------------G-GTCC-TT--C----A-A-CA--A-----TA---TGC
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1359 13 +     55023 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Piliocolobus_badius.k141_2704958                       C 0 I 2
s Piliocolobus_gordonorum.k141_381342                          909 13 -     89929 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Piliocolobus_gordonorum.k141_381342                    C 0 I 2
s Piliocolobus_kirkii.k141_1310104                            1498 13 +     40849 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Piliocolobus_kirkii.k141_1310104                       C 0 I 2
s Piliocolobus_tephrosceles.PDMG02000141.1                  253162 13 +  14605196 a-----------------------------g-gTTC-AT--T----A-------TCA-----------
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 2
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2667 15 +     22231 -----------------------------------------A----ATCGTATAA-----TA---TGC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 519 C 0
s Pithecia_albicans.k141_1239476                             63798 19 +    207309 A-----------------------------G-GTTT-AT--T----A-------ACAA--TA---TGC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4891 19 -     25401 A-----------------------------G-GTTT-AT--T----A-------ACAG--TA---TGC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30634 19 +     58159 A-----------------------------G-GTTT-AT--T----A-------ACAA--TA---TGC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30910 19 +     63561 A-----------------------------G-GTTT-AT--T----A-------ACAA--TA---TGC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30670 19 +     51148 A-----------------------------G-GTTT-AT--T----A-------ACAA--TA---TGC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555640 19 -   4542175 A-----------------------------G-GTTT-AT--T----A-------ACAA--TA---TGC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30654 19 +     51125 A-----------------------------G-GTTT-AT--T----A-------ACAA--TA---TGC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3376 19 -      8168 G-----------------------------G-GTCC-GT--C----A-A-CA--A-----TA---TGC
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7057 19 +     39866 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2141 19 -      9282 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41545 19 -     87950 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41939 19 -     88961 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6637 19 -     39403 A-----------------------------G-GTTC-AT--T----A-------ACAA--TG---TGC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41590 17 +     87928 A-----------------------------G-GTTC-AT--T----A-------ACA----A---TGC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6634 19 -     60166 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13571 19 -     67232 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41487 19 -     90634 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42954 19 +     89403 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176866 19 - 189387572 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191683 19 -   9816681 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26493 13 +     69807 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Presbytis_comata.k141_1230337                          C 0 I 2
s Presbytis_mitrata.k141_584736                              43689 13 -     80239 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Presbytis_mitrata.k141_584736                          C 0 I 2
s Procavia_capensis.ProCapCap_scaffold_255930                 2235 18 +      3019 ------------------------------g-GTCG-TT--T----A-------ATAA--TA---TGT
i Procavia_capensis.ProCapCap_scaffold_255930            N 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981512 19 +   4620579 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564979 19 -   2598838 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TGC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2615 19 -      7103 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TGC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3212 19 -     11706 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TGC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6948 19 -     30655 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TGC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33273 19 +     46564 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TGC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93544 19 -     98465 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TGC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7181 19 +     35169 A-----------------------------G-GTCC-TT--T----A-------ACAA--TA---TGC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            35501 32 +     52041 ggaatagttatatttaagaagaaaactgtTC-C-----------------------------------
i Psammomys_obesus.NESX01036366.1                        C 0 I 7
s Pteronotus_parnellii.KE847780.1                            51083 19 -     66298 G-----------------------------G-GCCC-TT--T----A-A-CA--A-----TA---TGC
i Pteronotus_parnellii.KE847780.1                        I 525 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3601 19 -     18639 G-----------------------------G-GTCC-TT--T----A-A-CA--A-----TA---TGC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839810 11 -  28871421 -----------------------------------------T----A-A-CA--A-----TA---TGC
i Pteropus_alecto.KB030862.1                             I 4 C 0
s Pteropus_vampyrus.KN525825.1                             3536319 11 -   4952924 -----------------------------------------T----A-A-CA--A-----TA---TGC
i Pteropus_vampyrus.KN525825.1                           I 4 C 0
s Puma_concolor.QAVW01001104.1                            18097990 18 +  38429054 ------------------------------A-GTCC-TT--T----A-A-CA--A-----TA---TGC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25867 13 +     91421 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Pygathrix_cinerea.k141_1153803                         C 0 I 2
s Pygathrix_nigripes_b.ctg100                                  152361 13 -   7812017 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Pygathrix_nigripes_b.ctg100                               C 0 I 2
s Pygathrix_nigripes_a.k141_215492                              6734 13 +     72585 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Pygathrix_nigripes_a.k141_215492                         C 0 I 2
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51966 19 +     55069 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021406 13 -  90668790 -------------------------------------tT--T----T-------ACAA--TA---TGT
i Rattus_norvegicus.chr16                                I 6 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913700 20 +   3329780 G-----------------------------GCGT-CATT--T----A-A-CA--A-----TA---TGT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              439 13 +      7119 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Rhinopithecus_bieti.k119_778604                        C 0 I 2
s Rhinopithecus_roxellana.NC_044550.1                    104121047 13 + 195417433 a-----------------------------g-gttc-aT--T----A-------TCA-----------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 2
s Rhinopithecus_strykeri.ctg102                             235289 13 -   7961872 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Rhinopithecus_strykeri.ctg102                          C 0 I 2
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73732 11 -    116970 -----------------------------------------T----A-A-CA--A-----TA---TGC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 4 C 0
s Saguinus_bicolor.k141_1429097                               2937 19 +     27962 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2832 19 +      6077 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2923 19 +      5971 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2845 19 +      5932 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1187 19 -      4390 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390622 19 - 209938924 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2794 19 +      5979 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3556 19 -      4301 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6621 19 +     16473 G-----------------------------G-GCCC-TT--C----A-A-CA--A-----TA---TGC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107963 19 + 121099817 a-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29524 19 -     47369 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29912 19 -     79414 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26603 19 -     34454 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14010 19 -     22428 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29156 19 -     47109 A-----------------------------G-GTTC-AT--T----A-------ACAA--TA---TGC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237216 19 +   5703754 A-----------------------------G-GTTC-AT--T----C-------ACAA--TA---TGC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6806 19 +     21866 A-----------------------------G-GTTC-AT--T----C-------ACAA--TA---TGC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114909 21 +    313613 G-----------------------------G-GTCC-TT--CTTATG-------A-----TA--ATGT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24186 13 +     27374 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Semnopithecus_entellus.k141_158471                     C 0 I 2
s Semnopithecus_hypoleucos.k141_1910531                      27700 13 +     58920 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Semnopithecus_hypoleucos.k141_1910531                  C 0 I 2
s Semnopithecus_johnii.k141_843753                           14196 13 -     45317 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Semnopithecus_johnii.k141_843753                       C 0 I 2
s Semnopithecus_priam.k141_714795                            21855 13 -     42441 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Semnopithecus_priam.k141_714795                        C 0 I 2
s Semnopithecus_schistaceus.k141_1432920                     24533 13 -     29113 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Semnopithecus_schistaceus.k141_1432920                 C 0 I 2
s Semnopithecus_vetulus.k141_244474                          27607 13 -     48123 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Semnopithecus_vetulus.k141_244474                      C 0 I 2
s Sigmodon_hispidus.SigHis_scaffold_20193                    48119 13 +     77746 -------------------------------------TT--T----T-------GTAG--TA---TGT
i Sigmodon_hispidus.SigHis_scaffold_20193                I 6 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857229 16 -   1910179 A-----------------------------A-GTTC-TT--T----A-------A-----TT---TGC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867231 19 +   3870691 A-----------------------------G-TTTC-TT--T----A-------ATAA--TA---TGC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5588 19 -     97271 G-----------------------------G-GTCC-TT--T----A-A-CA--A-----TA---TGC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123827 18 +    196729 ------------------------------G-GTCC-TT--T----A-A-CA--A-----TA---TGT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390110 19 +   1523678 G-----------------------------G-GTTC-AT--T----A-------ACAT--TA---TGC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13069 19 +     22964 G-----------------------------C-GTCC-TT--T----A-A-CA--A-----TA---TGC
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 531 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1604 18 +      5583 A-----------------------------C-GTCC-TT--T----A-------A-AA--TA---TTT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190514 19 +    199430 G-----------------------------G-GTTC-TT--G----A-A-CA--A-----TA---TGC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104466 19 -    539355 G-----------------------------G-GTTC-TT--G----A-A-CA--A-----TA---TGC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5807 19 +      6850 A-----------------------------A-GTCC-TT--T----A-------ATAG--GA---TGC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5858 19 +     20590 A-----------------------------A-GTCC-TT--T----A-------ATAG--GA---TGC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352070 13 - 186847797 a-----------------------------g-gtTC-AT--T----A-------TCA-----------
i Theropithecus_gelada.CM009954.1                        C 0 I 2
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23587 13 -     33621 G-----------------------------G-TC----C--T----C-------TC-----A---TGC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18728 18 -     31044 G-----------------------------T-GTCT-TT--T----G-------A-AA--TA---TTT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479111 19 -    610378 G-----------------------------G-CCCC-TT--G----T-A-CA--A-----TA---GGC
i Tonatia_saurophila.TonSau_scaffold_294                 I 527 C 0
s Trachypithecus_auratus.k141_1189070                        19732 13 +     26378 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Trachypithecus_auratus.k141_1189070                    C 0 I 2
s Trachypithecus_crepusculus.k141_539312                     32410 13 -     78344 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Trachypithecus_crepusculus.k141_539312                 C 0 I 2
s Trachypithecus_cristatus.k141_180416                       19057 13 +     25722 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Trachypithecus_cristatus.k141_180416                   C 0 I 2
s Trachypithecus_francoisi.k141_1453105                      27360 13 -     62838 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Trachypithecus_francoisi.k141_1453105                  C 0 I 2
s Trachypithecus_geei.k141_1001272                           27408 13 +     46913 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Trachypithecus_geei.k141_1001272                       C 0 I 2
s Trachypithecus_germaini.k141_57262                          8217 13 -     28527 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Trachypithecus_germaini.k141_57262                     C 0 I 2
s Trachypithecus_hatinhensis.k141_31479                      29299 13 -     64340 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 2
s Trachypithecus_laotum.k141_928651                          27336 13 -     63452 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Trachypithecus_laotum.k141_928651                      C 0 I 2
s Trachypithecus_leucocephalus.k141_96450                     8779 13 +     22490 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Trachypithecus_leucocephalus.k141_96450                C 0 I 2
s Trachypithecus_melamera.k141_591572                         2207 13 -      6147 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Trachypithecus_melamera.k141_591572                    C 0 I 2
s Trachypithecus_obscurus.k141_848057                         9112 13 -     13050 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Trachypithecus_obscurus.k141_848057                    C 0 I 2
s Trachypithecus_phayrei.ctg124                             254352 13 -   6242583 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Trachypithecus_phayrei.ctg124                          C 0 I 2
s Trachypithecus_pileatus.k141_2622778                         376 13 +     19340 A-----------------------------G-GTTC-AT--T----A-------TCA-----------
i Trachypithecus_pileatus.k141_2622778                   C 0 I 2
s Tragulus_javanicus.TraJav_scaffold_3462                   172237 19 -    200418 G-----------------------------G-GCCC-TT--T----A-A-CA--A-----TA---TGC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479370 19 -  10818551 G-----------------------------G-GTCC-TT--T----A-------ATAA--TA---TGC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832748 19 -   4065304 A-----------------------------T-GTCC-TT--T----A-------ACTG--TA---TGT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7068 19 -     70247 A-----------------------------G-GTCC-TT--T----A-------ACTG--TA---TGC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360169 19 -  33153633 G-----------------------------G-GTCC-TT--C----A-A-CA--A-----TA---TGC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    1366 20 -     21056 G-----------------------------G-GCCC-TT--TTTAGG-------A-----TA---TGT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180767 19 +   5085361 G-----------------------------G-GTCC-TT--T----A-A-CA--G-----TA---TGC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24156 19 -     30710 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23063 19 -    147434 A-----------------------------G-GTCA-TT--T----A-------ACAA--TA---TGC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75245 19 +   5488506 G-----------------------------G-GTCC-TT--C----A-A---caa-----ta---tgc
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103906 19 -    112863 G-----------------------------G-GTCC-TT--T----A-A-CA--A-----TA---TGT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173013 12 -    224448 --------------------------------------T--T----A-------ACAA--TA---TGC
i Xerus_inauris.XerIna_scaffold_2302                     I 3 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27807 19 -     86975 G-----------------------------T-GTCC-TT--T----A-A-TA--A-----TA---TGC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2290 13 +      2695 -------------------------------------TT--T----A-------ACAA--TA---TGT
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 6 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751  0 -    498745 C
e Equus_caballus.CM000403.2                               21373965  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041  0 -   4378816 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4418 15 +     36723 AAAACAGATGA-A--AT---------G
s Acinonyx_jubatus.LLWD01001279.1                           811747 15 +   1699592 AAAATAGAAGA-A--AT---------G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     18828  8 +     63021 -------ATAA-A--AT---------T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414280 15 +  29979442 AGAATAGATAA-A--AG---------G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214590 15 +    347723 AGAATAGATAA-A--AT---------g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16870 15 -     61208 AGAACATAAAA-C--AT---------G
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46734 15 +     53615 AAAACAGATGA-A--AT---------G
i Allenopithecus_nigroviridis.k141_3755588               I 2 C 0
s Allochrocebus_lhoesti.k141_441277                          42695 15 +     44087 AAAACAGATGA-A--AT---------G
i Allochrocebus_lhoesti.k141_441277                      I 2 C 0
s Allochrocebus_preussi.k141_1993939                         15320 15 -     21945 AAAACAGATGA-A--AT---------G
i Allochrocebus_preussi.k141_1993939                     I 2 C 0
s Allochrocebus_solatus.k141_3554717                         17003 15 +     32033 AAAACAGATGA-A--AT---------G
i Allochrocebus_solatus.k141_3554717                     I 2 C 0
s Alouatta_belzebul.k141_1011583                             71174 15 -     84148 AAAACAGATGA-A--AT---------G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43413 15 -     78289 AAAACAGATGA-A--AT---------G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42852 15 +     55831 AAAACAGATGA-A--AT---------G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41302 15 -     64179 AAAACAGATGA-A--AT---------G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22941 15 -     24835 AAAACAGATGA-A--AT---------G
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39927 15 +     45454 AAAACAGATGA-A--AT---------G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45573 15 +     70886 AAAACAGATGA-A--AT---------G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7749 15 +     30854 AAAACAGATGA-A--AT---------G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31885 15 +     42133 AAAACAGATGA-A--AT---------G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584109 15 +   2318259 AGAATAGATAA-A--AT---------G
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176088 15 -    412891 AGGGCAGACAA-G--GT---------G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49208 15 -     68529 AGAATAGATAA-A--AT---------G
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     128 15 +     17741 AAAACAGATGA-A--AT---------G
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              753 15 -     15923 AAAACAGATGA-A--AT---------G
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671514 15 +   5030052 agaacagaggc-c--tc---------g
i Aotus_nancymaae.KZ198451.1                             I 66 C 0
s Aotus_trivirgatus.k141_318729                               1028 15 -     16391 AAAACAGATGA-A--AT---------G
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                588 15 -     17186 AAAACAGATGA-A--AT---------G
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14907 11 -     32367 AGAACAGATAA----------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4367 15 -     15198 CGGACAGGCAA-G--GT---------G
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273636 15 +  21539123 AAAACAGATGA-A--AT---------G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9804 15 +     48076 AAAACAGATGA-A--AT---------G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4941 15 -     28759 AAAACAGATGA-A--AT---------G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32493 15 +     44353 AAAACAGATGA-A--AT---------G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47864 15 -     71267 AAAACAGATGA-A--AT---------G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21923 15 -     33135 AAAACAGATGA-A--AT---------G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5114 15 +     11645 AGAACAGATAA-A--AA---------G
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5120 15 -     19611 AGAACAGATAA-A--AA---------G
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955942 15 -  23207421 AGGACAGATAA-A--AT---------G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 4
s Balaenoptera_bonaerensis.DF507193.1                         3151 15 -      4711 AGGACAGATAA-A--AT---------G
i Balaenoptera_bonaerensis.DF507193.1                    C 0 I 4
s Beatragus_hunteri.BeaHun_scaffold_7278                     85104 15 +    124022 GGAATAGATAA-A--AT---------G
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20637 15 +    288883 agaataaataa-a--at---------g
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355024 15 +  48749331 AGAATAGATAA-A--AT---------G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753592 15 +   1948126 AGAATAGATAA-A--AT---------G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543731 15 -  45695690 AGAATAGATAA-A--AT---------G
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528755 15 -   4408762 AGAATAGATAA-A--AT---------G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6824 15 +     28062 AAAACAGATGA-A--AT---------T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42118 15 -     91139 AAAACAGATGA-A--AT---------T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19644 15 +     95584 AAAACAGATGA-A--AT---------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19557 15 +    119600 AAAACGGATGA-A--AT---------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9110 15 +     18648 AAAACAGATGG-A--AT---------G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8649 15 -     13885 AAAACAGATGA-A--AT---------G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             717 15 -      8861 AAAACAGATGA-A--AT---------G
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453110 15 + 189096842 AAAACAGATGA-A--AT---------G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                632 15 +      8664 AAAACAGATGA-A--AT---------G
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629930 15 +  17673402 agaacagataa-a--at---------G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664216 15 +   7040546 AGAACAGACAA-A--AT---------G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207876 15 +   1652518 agaacagataa-a--at---------G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504295 15 +  60362399 AGAATAGATAA-A--AT---------G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7931 15 -     23171 AGAATAGATAA-A--AT---------G
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221274 15 +   9314153 AGAATAGATAA-A--AT---------G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614409 15 +  59632846 AGAATAGATAA-A--AT---------G
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45105990 15 -  63665305 AGAATAGATAA-A--AT---------G
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407821 15 -  46296322 AGAATAGATAA-A--AT---------G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590094 15 +  44709034 AGAATAGATAA-A--AT---------G
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_108409                   6933 15 +      8835 AGAACAGGTAA-A--GG---------A
i Capromys_pilorides.CapPil_scaffold_108409              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269200 15 +    496798 aaaacaaataa-a--at---------g
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                302 15 -      1021 AGGCCAGACGC-A--GT---------G
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78297 14 -    217609 AAAACAAGTAA-A--AC----------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995007 15 +  23392119 AGAACAGATAA-A--AT---------A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998449 15 +  23407841 AGAACAGATAA-A--AT---------A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61550 15 -     66877 AGAACAGATAA-A--AT---------A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4028 15 -     12580 AAAACAGATGA-A--AT---------G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42085 15 +     53515 AAAACAGATGA-A--AT---------A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370017 15 -  26074798 AAAACAGATGA-A--AT---------G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6906 15 -     34880 AAAACAGATGA-A--AT---------G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66001 15 -     89041 AAAACAGATGA-A--AT---------G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1131 15 -      5494 AAAACAAATAA-A--AT---------G
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491081 15 -  27778364 AGAACACCTAA-A--AT---------G
i Ceratotherium_simum.JH767749.1                         C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17914 15 +     27315 AGAACACCTAA-A--AT---------G
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 4
s Cercocebus_atys.KQ010504.1                                139917 15 -   4669795 AAAACAGATGA-A--AT---------G
i Cercocebus_atys.KQ010504.1                             I 2 C 0
s Cercocebus_chrysogaster.k141_1522556                       43659 15 +     47900 AAAACAGATGA-A--AT---------G
i Cercocebus_chrysogaster.k141_1522556                   I 2 C 0
s Cercocebus_lunulatus.k141_2779015                          43486 15 -     44860 AAAACAGATGA-A--AT---------G
i Cercocebus_lunulatus.k141_2779015                      I 2 C 0
s Cercocebus_torquatus.k141_2159127                          43472 15 -    148725 AAAACAGATGA-A--AT---------G
i Cercocebus_torquatus.k141_2159127                      I 2 C 0
s Cercopithecus_ascanius.k141_3120866                        25689 15 -     40656 AAAACAGATGA-A--AT---------G
i Cercopithecus_ascanius.k141_3120866                    I 2 C 0
s Cercopithecus_cephus.k141_4183004                           5655 15 +     20796 AAAACAGATGA-A--AT---------G
i Cercopithecus_cephus.k141_4183004                      I 2 C 0
s Cercopithecus_diana.k141_132293                            10732 15 -     17524 AAAACAGATGA-A--AT---------G
i Cercopithecus_diana.k141_132293                        I 2 C 0
s Cercopithecus_hamlyni.k141_566925                          26454 15 -     34525 AAAACAGATGA-A--AT---------G
i Cercopithecus_hamlyni.k141_566925                      I 2 C 0
s Cercopithecus_lowei.k141_2101310                           10275 15 -     25376 AAAACAGATGA-A--AT---------G
i Cercopithecus_lowei.k141_2101310                       I 2 C 0
s Cercopithecus_albogularis.ctg5                                  362875 15 -  39242232 AAAACAGATGA-A--AT---------G
i Cercopithecus_albogularis.ctg5                               I 2 C 0
s Cercopithecus_mona.ctg39                                  268587 15 +  21565898 AAAACAGATGA-A--AT---------G
i Cercopithecus_mona.ctg39                               I 2 C 0
s Cercopithecus_neglectus.k141_858615                        30921 15 -     45857 AAAACAGATGA-A--AT---------G
i Cercopithecus_neglectus.k141_858615                    I 2 C 0
s Cercopithecus_nictitans.k141_2995370                       25861 15 -     32606 AAAACAGATGA-A--AT---------G
i Cercopithecus_nictitans.k141_2995370                   I 2 C 0
s Cercopithecus_petaurista.k141_42573                         2019 15 +      8499 AAAACAGATGA-A--AT---------G
i Cercopithecus_petaurista.k141_42573                    I 2 C 0
s Cercopithecus_pogonias.k141_6079                           24417 15 +     70610 AAAACAGATGA-A--AT---------G
i Cercopithecus_pogonias.k141_6079                       I 2 C 0
s Cercopithecus_roloway.k141_3012935                         21346 15 +     36323 AAAACAGATGA-A--AT---------G
i Cercopithecus_roloway.k141_3012935                     I 2 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11712 15 -     19938 GGAACAGGTAA-A--AT---------G
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29533 15 -     33796 AGAACAGATAA-A--AA---------G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4050 15 -     15404 AGAACAGATAA-A--AA---------G
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7908 15 -     32913 AAAACAGATGA-A--AT---------G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18321 15 -     40346 AAAACAGATGA-A--AT---------G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18576 15 +    216457 AAAACAGATGA-A--AT---------G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18369 15 +     39636 AAAACAGATGA-A--AT---------G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237487 15 -   2543920 AGAACAGGTAA-A--GT---------A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2958 15 +      5346 AAAACAGATGA-A--AT---------G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41453 15 -    112038 AAAACAGATGA-A--AT---------G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7024 15 +     34062 AAAACAGATGA-A--AT---------G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342237 15 +  18827391 AAAACAGATGA-A--AT---------G
i Chlorocebus_aethiops.ctg25                             I 2 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8783 15 -     44032 AAAACAGATGA-A--AT---------G
i Chlorocebus_pygerythrus.k141_3063162                   I 2 C 0
s Chlorocebus_sabaeus.CM001947.1                            303561 15 - 135778131 AAAACAGATGA-A--AT---------G
i Chlorocebus_sabaeus.CM001947.1                         I 2 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13028 15 +     15858 AGAATAGGTAA-A--AT---------G
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            604604 15 -    839153 agaataggtaA-A--AT---------G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             407999 15 -   2368649 AAAACAGATGA-A--AT---------G
i Colobus_angolensis.KN981557.1                          I 2 C 0
s Colobus_guereza.LG01                                      377874 15 - 200372422 AAAACAGATGA-A--AT---------G
i Colobus_guereza.LG01                                   I 2 C 0
s Colobus_polykomos.k141_906115                               1423 15 -     84244 AAAACAGATGA-A--AT---------G
i Colobus_polykomos.k141_906115                          I 2 C 0
s Condylura_cristata.JH655891.1                           35806139 19 +  53390261 ACAATagataa-a--at-----gaagt
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1711 15 -      8242 AGAACAGATAA-A--AT---------G
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41143 15 -     83289 AGAATAGATAA-A--AT---------T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113595 15 - 224834208 AGACTAGATAG-A--AT---------T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6044 11 +     12657 ----TAGGACA-A--TT---------A
i Crocidura_indochinensis.CroInd_scaffold_77846          N 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3208 15 +     87169 AGAATAGAGGA-A--AT---------T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643834 15 -   1526836 AAAAGAGATAA-A--AT---------G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16474 15 +     50838 AAAGCAGGTAA-A--GG---------A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2951 15 +     36344 AGAACAGGTAA-A--GT---------A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26710 14 +     75252 AGAACAGGTAA-A--GT----------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109055 15 -   2246927 ggaacaGGTAA-A--AT---------G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291485 15 +  12879189 AGAACAGATAA-A--AT---------G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624271 15 -  35494412 AGGACAGATAA-A--AT---------G
i Delphinapterus_leucas.KZ290073.1                       C 0 I 4
s Desmodus_rotundus.PEHR01003915.1                             143 15 +       233 AGGACAGATAA-G--GT---------G
i Desmodus_rotundus.PEHR01003915.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663372 15 -   1390856 AGAACACCTAA-A--AT---------G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 4
s Diceros_bicornis.DicBicMic_scaffold_5955                  138158 15 -    198055 AGAACACCTAA-A--AT---------G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 4
s Dinomys_branickii.DinBra_scaffold_10381                    97522 15 -    115145 AGAACAGGTAA-A--GT---------A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949213 15 -  37912305 TGAAGAGATAA-A--AT---------G
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4160 15 -     10735 TGAAGAGATAA-A--AT---------G
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8976 15 +     14636 AGAACAGGTAA-A--AC---------A
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853656 15 - 111700974 AGAATGGAAAA-G--AT---------G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5171 15 +     19438 agaacagataa-a--at---------a
i Eidolon_helvum.AWHC01266696.1                          C 0 I 4
s Elaphurus_davidianus.JRFZ01104969.1                       238495 15 -    607251 AGAACAGATAA-A--AT---------G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107455 15 -  10337057 AGAACTGATAA-A--AT---------G
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29870 15 +    110024 AGACTAGATAA-A--AT---------G
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11845 15 +     18970 AGACTAGATAA-A--AT---------G
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915017 15 +  41312741 AGATAAGATAA-A--AT---------G
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577741 15 +  14770903 AGAACAGATAA-A--AC---------A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3664383 11 +   7059049 ----TAGATAA-A--AT---------A
i Erinaceus_europaeus.JH835339.1                         N 0 I 4
s Erythrocebus_patas.Contig38                               261764 15 +  21539334 AAAACAGATGA-A--AT---------G
i Erythrocebus_patas.Contig38                            I 2 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63821 15 -    133382 AGGACAGATAA-A--AT---------G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 4
s Eubalaena_japonica.EubJap_flattened_line_118172             4038 15 +      7672 AGGACAGATAA-A--AT---------G
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 I 4
s Eulemur_albifrons.k141_51491                               13658 15 -     24895 AGAACAGATAA-A--AT---------G
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41367 15 -     70999 AGAACAGATAA-A--AT---------G
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85329 15 +    112731 AGAACAGATAA-A--AT---------G
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41898 15 +     68309 AGAACAGATAA-A--AT---------G
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52224 15 -     65740 AGAACAGATAA-A--AT---------G
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22853 15 -     75513 AGAACAGATAA-A--AT---------G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47050 15 -     97555 AGAACAGATAA-A--AT---------G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3775 15 +     30972 AGAACAGATAA-A--AT---------G
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41495 15 -     52037 AGAACAGATAA-A--AT---------G
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57897 15 -    111500 AGAACAGATAA-A--AT---------G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245660 15 - 206538554 AAAATAGAAGA-A--AT---------G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115445 15 - 205367284 AAAATAGAAGA-A--AT---------G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26547 15 -     30238 AAAATAGAAGA-A--AT---------G
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123422 14 -    137831 -AAACAGATTA-A--AT---------G
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6967 14 +     22493 -AAACAGATTA-A--AT---------G
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19018 14 -     32986 -AAACAGACAA-A--AT---------G
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17978 15 +     18121 AGAACAGATAA-A--AT---------G
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90174 15 -     95226 AGAATAGATAA-A--AT---------G
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33098 11 -     36801 AGAACGGATAA----------------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 3
s Gorilla_beringei.k141_3358147                               4721 14 -      8343 AAAACAGATGA-A---T---------G
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253732 15 - 186649187 AAAACAGATGA-A--AT---------G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     595 11 -     78134 AGAACAGATAA----------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 3
s Hapalemur_alaotrensis.k141_330369                          13583 15 -     40692 AGAACAGATAA-A--AT---------G
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             34985 15 +     49394 AGAACAGATAA-A--AT---------G
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59854 14 -     66874 AG-ACAGATAA-A--AT---------G
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8727 15 -     42923 AGAACAGATAA-A--AT---------G
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15727 15 -     53142 AGAACAGATAA-A--AT---------G
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29685 15 -    327341 GGAATAGAGGA-A--GT---------G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7928 15 +     48891 AGAATAGATAA-A--AT---------G
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1926125  6 -  22651954 AGAAAA---------------------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                5867 15 +      6687 AGAACAGATAA-A--AT---------G
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6534 15 -     36432 AGGACAGATAA-A--AT---------G
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 4
s Hipposideros_galeritus.HipGal_scaffold_23202               49702 15 +     49977 AGAACAGATAA-A--AT---------G
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141740 15 -    630532 AAAACAGATGA-A--AT---------G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68604 15 +     83186 AGAATAGAGGA-A--AT---------G
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70394 15 +    143317 AGAACAGGTAA-A--AT---------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4775 15 +     12352 AAAACAGATGA-A--AT---------G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11959 15 +     55766 AAAACAGATGA-A--AT---------G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051557 15 + 191637585 AAAACAGATGA-A--AT---------G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800435 15 +  11177569 AAAACAGATGA-A--AT---------G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3072 15 -    135385 AGAAGAGGTAA-A--GT---------A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385671 11 +   7955117 AGAACAGATAA----------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Indri_indri.k141_2415743                                    1237 15 +     11955 AGAACAGATAA-A--AA---------G
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2058 15 -     16823 AGGACAGATAA-A--AT---------G
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 4
s Jaculus_jaculus.JH725527.1                               1238054 15 +   9596543 GGAGCATAAAA-T--Gt---------t
i Jaculus_jaculus.JH725527.1                             C 0 I 369
s Kogia_breviceps.KogBre_flattened_line_3970                 64537 15 -     97402 AGGACAGATAA-A--AT---------G
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 4
s Lagothrix_lagothricha.k141_246028                          42180 15 +    110728 AAAACAGATGA-A--AT---------G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61604 15 -     65777 AGAACAGATAA-A--AT---------G
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758376 15 +  30322482 AGAACAGATAA-A--AT---------G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3096 15 -     13097 AAAACAGATGA-A--AT---------G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2850 15 +      5940 AAAACAGATGA-A--AT---------G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2680 15 -      5717 AAAACAGATGA-A--AT---------G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9045 15 -     11567 AAAACAGATGA-A--AT---------G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10426 15 -     12945 AAAACAGATGA-A--AT---------G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7905 15 +     29618 AGAACAGATAA-A--AT---------G
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7901 15 +     31569 AGAACAGATAA-A--AT---------G
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7911 15 +     24756 AGAACAGATAA-A--AT---------G
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7911 15 +     16388 AGAACAGATAA-A--AT---------G
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812429 15 -   3914936 AGAATAGATAA-A--GG---------G
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16755 15 +     24238 ATAACAGATAA-A--AT---------A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333578 15 +    662738 AGGCCAGATAA-A--AT---------G
i Lipotes_vexillifer.KE559953.1                          C 0 I 4
s Lophocebus_aterrimus.ctg367                               331870 15 -   1826925 AAAACAGATGA-A--AT---------G
i Lophocebus_aterrimus.ctg367                            I 2 C 0
s Loris_lydekkerianus.k141_2031736                            9179 14 +     19643 -AAACCGATAA-A--AT---------G
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042840 14 -   6120653 -AAACCGATAA-A--AT---------G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079929 15 +  43346337 Agaacagataa-a--at---------g
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613564 15 +  59628241 AGAATAGATAA-A--AT---------G
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44186 15 -     61512 AAAACAGATGA-A--AT---------G
i Macaca_arctoides.k141_1757516                          I 2 C 0
s Macaca_assamensis.Contig5                                 371848 15 -  60120075 AAAACAGATGA-A--AT---------G
i Macaca_assamensis.Contig5                              I 2 C 0
s Macaca_cyclopis.k119_263443                                24111 15 +     30207 AAAACAGATGA-A--AT---------G
i Macaca_cyclopis.k119_263443                            I 2 C 0
s Macaca_fascicularis.k141_1397292                           21214 15 -     24934 AAAACAGATGA-A--AT---------G
i Macaca_fascicularis.k141_1397292                       I 2 C 0
s Macaca_fuscata.k119_546792                                 24064 15 +     30527 AAAACAGATGA-A--AT---------G
i Macaca_fuscata.k119_546792                             I 2 C 0
s Macaca_leonina.k141_321385                                 35240 15 -     50087 AAAACAGATGA-A--AT---------G
i Macaca_leonina.k141_321385                             I 2 C 0
s Macaca_maura.k141_1103459                                  44984 15 +     51645 AAAACAGATGA-A--AT---------G
i Macaca_maura.k141_1103459                              I 2 C 0
s Macaca_mulatta.NC_041758.1                                414187 15 - 187317192 AAAACAGATGA-A--AT---------G
i Macaca_mulatta.NC_041758.1                             I 2 C 0
s Macaca_nemestrina.KQ007038.1                              398417 15 +  25927173 AAAACAGATGA-A--AT---------G
i Macaca_nemestrina.KQ007038.1                           I 2 C 0
s Macaca_nigra.k141_2818840                                  47589 15 -     62418 AAAACAGATGA-A--AT---------G
i Macaca_nigra.k141_2818840                              I 2 C 0
s Macaca_radiata.k141_2139468                                  127 15 +     14901 AAAACAGATGA-A--AT---------G
i Macaca_radiata.k141_2139468                            I 2 C 0
s Macaca_siberu.k141_2185972                                 44061 15 +     59329 AAAACAGATGA-A--AT---------G
i Macaca_siberu.k141_2185972                             I 2 C 0
s Macaca_silenus.Contig273                                  269969 15 +    668171 AAAACAGATGA-A--AT---------G
i Macaca_silenus.Contig273                               I 2 C 0
s Macaca_thibetana.k99_503078                                  245 15 +      1732 AAAACAGATGA-A--AT---------G
i Macaca_thibetana.k99_503078                            I 2 C 0
s Macaca_tonkeana.k141_339739                                 1767 15 +     17132 AAAACAGATGA-A--AT---------G
i Macaca_tonkeana.k141_339739                            I 2 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222136 15 -    270270 AGAACAGATAA-A--AT---------A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 4
s Mandrillus_leucophaeus.scaffold280                        321266 15 +  24302211 AAAACAGATGA-A--AT---------G
i Mandrillus_leucophaeus.scaffold280                     I 2 C 0
s Mandrillus_sphinx.Contig270                               356098 15 -    752769 AAAACAGATGA-A--AT---------G
i Mandrillus_sphinx.Contig270                            I 2 C 0
s Manis_javanica.JSZB01003497.1                             672454 15 -    737560 AGAAGAGATAA-A--AT---------G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219741 15 +    317179 AGAAGAGATAA-A--AT---------G
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499892 11 +  40650429 AGAACAGACAA----------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                       149301 15 +    207569 AGAACAGATAA-A--AT---------A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25121 15 -     74585 AGATAAGATAA-A--AT---------G
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 47941 15 -    140813 AGGCTTGACAA-A--AT---------T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 7 C 0
s Mesocricetus_auratus.KB708134.1                         17428145 11 +  29670104 ----TAGATAA-A--AT---------T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80124 13 +     93471 AGGACAGA--A-A--AT---------G
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 4
s Mico_argentatus.k141_582562                                 9219 15 +     17804 AAAACAGATGA-A--AT---------G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9721 15 -     12984 AAAACAGATGA-A--AT---------G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18035 15 -     26561 AAAACAGATGA-A--AT---------G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983515 15 +  93316391 AGAACAAGTAA-A--AA---------G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44694 15 +    145209 TGCACTGGAAA-G--AT---------T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184057 15 +    200668 AGGGGAGGCGA-G--GT---------G
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961282 15 +  27267610 AGACTGGATAA-A--AT---------G
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362159 15 -   8254450 AGAACAGATAA-A--AT---------G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41060 15 -     48117 AGAACAGATAA-A--AT---------G
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21275 15 -     27822 AAAACAGATGA-A--AT---------G
i Miopithecus_ogouensis.k141_1534655                     I 2 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7437 15 +     27589 AGAATAGATAA-A--GG---------G
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51304 15 -     62432 AGAACAAATAA-A--AA---------G
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352014 15 +    437263 AGGACAGATAA-A--AT---------G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 4
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178219 15 +    366855 ACAACAGGTAA-C--AT---------G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23223 15 -     82753 AGAATAGATAA-A--AT---------G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17438 15 -     63510 GGAATAGAGGA-A--AT---------G
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38099 15 +     47283 AGAACAGATAA-A--AA---------G
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35591816 15 + 120012414 AAACTAGATAA-A--AT---------T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686175 15 + 129401213 AAACTAGATAA-A--AT---------T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216061 15 +  89631738 AAACTAGATAA-A--AT---------T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495496 15 + 130317789 AAACTAGATAA-A--AT---------T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81678 11 -     86153 AGAACAAATAG----------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 3
s Mustela_putorius.JH418006.1                             14354053 15 +  14710649 AGATAAGATAA-A--AT---------G
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792351 15 +  10118263 AGAACAGATAA-A--AT---------G
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386510 15 +   6019432 AGAACAGATAA-A--AC---------G
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382330 15 +   4330536 AGAACAGATAA-A--AC---------G
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1158 15 +     18357 AGAACAGATAA-A--AC---------G
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118506 15 +    130748 GGAGCAGATAA-A--AT---------G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             944963 15 +   3037898 GGAACAGATAA-A--AC---------G
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              27925 15 +     34575 AAAACAGATGA-A--AT---------G
i Nasalis_larvatus.k141_1350636                          I 2 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468032 15 -  31847680 AGAATAGATAA-A--GG---------G
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226183 15 -   7148211 AGGACAGATAA-A--AT---------G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 4
s Noctilio_leporinus.NocLep_scaffold_7894                   126930 15 -    149072 AGAACAGATAA-A--AT---------G
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52667 15 -    132029 AAAACAGATGA-A--AT---------G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8762 15 -     16345 AAAACAGATGA-A--AT---------G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14647 15 +     22201 AAAACAGATGA-A--AT---------G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412868 15 -  22158432 AAAACAGATGA-A--AT---------G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25045 15 -     54323 AAAACAGATGA-A--AT---------G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197157 15 +   9404916 AGAATAGATAA-A--AT---------G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635175 14 + 196305487 -AAACAGATAA-A--AT---------G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1933 14 -      3937 -AAACAGATAA-A--AT---------G
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563414 14 - 199412804 -AAACAGATAA-A--AT---------G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550120 15 -   3988456 ATAACAGATAA-A--AT---------A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053143 15 -  11899542 AGAACAGGTAA-A--GG---------A
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450628 15 +   2017862 AAAATAGATAA-A--GG---------G
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435066 15 -    630418 AGAACAGATAA-A--AT---------G
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13058 15 +    150152 AGAATAGATAA-A--AT---------G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91641 15 -    140218 AGACTAGATAA-A--AT---------G
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2500 15 -     41509 GGACTAGAAAA-A--AT---------C
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095453 15 +  10937097 AGGACAGATAA-A--AT---------G
i Orcinus_orca.KB316932.1                                C 0 I 4
s Orycteropus_afer.OryAfe_flattened_line_171931              12546 15 -     14239 GGAACAGATAT-A--AT---------G
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102591 15 - 174332312 ATAACAGATAA-A--AT---------A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38203 15 +    559221 AGAATAGATAA-A--AT---------G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38575 14 -     51505 -AAACAGATTA-A--AT---------G
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351578 14 +   1103335 -AAACAGATTA-A--AT---------G
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403048 15 -  44047080 AGAATAGATAA-A--AT---------G
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3567 15 +     17875 AGAATAGATAA-A--AT---------G
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             11335 16 -     26668 AAAACAGATGGAA--AT---------G
i Pan_troglodytes.NBAG03003091.1                         I 106 I 6
s Panthera_onca.PanOnc_flattened_line_3271                   23368 15 -    230217 AAAATAGAAGA-A--AT---------G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460694 15 -  18783137 AAAATAGAAGA-A--AT---------G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971414 15 +   8748460 AAAATAGAAGA-A--AT---------G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614490 15 +   2937107 AGAATAGATAA-A--AT---------G
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242099 15 - 183742232 AAAACAGATGA-A--AT---------G
i Papio_anubis.CM001495.2                                I 2 C 0
s Papio_cynocephalus.k141_1507553                             8561 15 +     21308 AAAACAGATGA-A--AT---------G
i Papio_cynocephalus.k141_1507553                        I 2 C 0
s Papio_hamadryas.Contig39                                  291135 15 -  20919399 AAAACAGATGA-A--AT---------G
i Papio_hamadryas.Contig39                               I 2 C 0
s Papio_kindae.k141_2214839                                  21209 15 -     27687 AAAACAGATGA-A--AT---------G
i Papio_kindae.k141_2214839                              I 2 C 0
s Papio_papio.k141_799093                                    14355 15 +     16796 AAAACAGATGA-A--AT---------G
i Papio_papio.k141_799093                                I 2 C 0
s Papio_ursinus.k141_2278143                                 21166 15 -     23640 AAAACAGATGA-A--AT---------G
i Papio_ursinus.k141_2278143                             I 2 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14007 15 +     78924 AGAATAGAGGA-A--GT---------G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          24855 14 +     31479 -AAATAGATAA-A--AT---------G
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17223 14 -     24908 -AAATAGATAA-A--AT---------G
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         577 15 +      9367 TGAAGAGATAA-A--AT---------G
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245721 15 +  18517816 GGACTAGAAAA-A--AA---------C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30963 15 -     56120 AGAACAGGTAA-A--GG---------A
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11311 15 -     15039 AGGACAGGTAA-A--AT---------G
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 I 4
s Piliocolobus_badius.k141_2704958                            1374 15 +     55023 AAAACAGATGG-A--AT---------G
i Piliocolobus_badius.k141_2704958                       I 2 C 0
s Piliocolobus_gordonorum.k141_381342                          924 15 -     89929 AAAACAGATGA-A--AT---------G
i Piliocolobus_gordonorum.k141_381342                    I 2 C 0
s Piliocolobus_kirkii.k141_1310104                            1513 15 +     40849 AAAACAGATGA-A--AT---------G
i Piliocolobus_kirkii.k141_1310104                       I 2 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253177 15 +  14605196 AAAACAGATGG-A--AT---------G
i Piliocolobus_tephrosceles.PDMG02000141.1               I 2 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2682 15 +     22231 AGAACAGATAA-A--AT---------G
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63817 15 +    207309 AAAACAGATGA-A--AT---------G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4910 15 -     25401 AAAACAGATGA-A--AT---------G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30653 15 +     58159 AAAACAGATGA-A--AT---------G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30929 15 +     63561 AAAACAGATGA-A--AT---------G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30689 15 +     51148 AAAACAGATGA-A--AT---------G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555659 15 -   4542175 AAAACAGATGA-A--AT---------G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30673 15 +     51125 AAAACAGATGA-A--AT---------G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3395 15 -      8168 AGGACAGATAA-A--AT---------G
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 I 4
s Plecturocebus_bernhardi.k141_2549090                        7076 15 +     39866 AAAACAGATGA-A--AT---------G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2160 15 -      9282 AAAACAGATGA-A--AT---------G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41564 15 -     87950 AAAACAGATGA-A--AT---------G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41958 15 -     88961 AAAACAGATGA-A--AT---------G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6656 15 -     39403 AAAACAGATGA-A--AT---------G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41607 15 +     87928 AAAACAGATGA-A--AT---------G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6653 15 -     60166 AAAACAGATGA-A--AT---------G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13590 15 -     67232 AAAACAGATGA-A--AT---------G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41506 15 -     90634 AAAACAGATGA-A--AT---------G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42973 15 +     89403 AAAACAGATGA-A--AT---------G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176885 15 - 189387572 AAAACAGATGA-A--AT---------G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191702 15 -   9816681 AAAACAGATGA-A--AT---------G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26508 15 +     69807 AAAACAGATGA-A--AT---------G
i Presbytis_comata.k141_1230337                          I 2 C 0
s Presbytis_mitrata.k141_584736                              43704 15 -     80239 AAAACAGATGA-A--AT---------G
i Presbytis_mitrata.k141_584736                          I 2 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2253 15 +      3019 AGAACAGATAA-A--AT---------G
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981531 15 +   4620579 AGAACCAATAA-A--AT---------G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1564998 15 -   2598838 AGAACAGATAA-A--AA---------G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2634 15 -      7103 AGAACAGATAA-A--AA---------G
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3231 15 -     11706 AGAACAGATAA-A--AA---------G
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6967 15 -     30655 AGAACAGATAA-A--AA---------G
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33292 15 +     46564 AGAACAGATAA-A--AA---------G
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93563 15 -     98465 AGAACAGATAA-A--AA---------G
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7200 15 +     35169 AGAACAGATAA-A--AA---------G
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            35540 15 +     52041 AGACTTGACAA-A--AT---------T
i Psammomys_obesus.NESX01036366.1                        I 7 C 0
s Pteronotus_parnellii.KE847780.1                            51102 15 -     66298 AGAACAGATAA-C--AT---------G
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3620 15 -     18639 AGATAAGATAA-A--AT---------G
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839821 15 -  28871421 AGAACAGATAA-A--AT---------A
i Pteropus_alecto.KB030862.1                             C 0 I 4
s Pteropus_vampyrus.KN525825.1                             3536330 15 -   4952924 AGAACAGATAA-A--AT---------A
i Pteropus_vampyrus.KN525825.1                           C 0 I 4
s Puma_concolor.QAVW01001104.1                            18098008 15 +  38429054 AAAATAGAAGA-A--AT---------G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25882 15 +     91421 AAAACAGATGA-A--AT---------G
i Pygathrix_cinerea.k141_1153803                         I 2 C 0
s Pygathrix_nigripes_b.ctg100                                  152376 15 -   7812017 AAAACAGATGA-A--AT---------G
i Pygathrix_nigripes_b.ctg100                               I 2 C 0
s Pygathrix_nigripes_a.k141_215492                              6749 15 +     72585 AAAACAGATGA-A--AT---------G
i Pygathrix_nigripes_a.k141_215492                         I 2 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 51985 15 +     55069 AGAACAGATAA-A--AT---------G
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021419 15 -  90668790 AAACTAGATAA-A--AT---------T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913720 15 +   3329780 AGAACAGATAA-A--AT---------A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              454 15 +      7119 AAAACAGATGA-A--AT---------G
i Rhinopithecus_bieti.k119_778604                        I 2 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121062 15 + 195417433 AAAACAGATGA-A--AT---------G
i Rhinopithecus_roxellana.NC_044550.1                    I 2 C 0
s Rhinopithecus_strykeri.ctg102                             235304 15 -   7961872 AAAACAGATGA-A--AT---------G
i Rhinopithecus_strykeri.ctg102                          I 2 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73743 15 -    116970 AGAACAGATAA-A--AT---------A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 4
s Saguinus_bicolor.k141_1429097                               2956 15 +     27962 AAAACAGATGA-A--AT---------G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2851 15 +      6077 AAAACAGATGA-A--AT---------G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2942 15 +      5971 AAAACAGATGA-A--AT---------G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2864 15 +      5932 AAAACAGATGA-A--AT---------G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1206 15 -      4390 AAAACAGATGA-A--AT---------G
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390641 15 - 209938924 AAAACAGATGA-A--AT---------G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2813 15 +      5979 AAAACAGATGA-A--AT---------G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3575 15 -      4301 AAAACAGATGA-A--AT---------G
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6640 15 +     16473 AGAATAGATAA-A--GT---------G
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107982 15 + 121099817 AAAACAGATGA-A--AT---------G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29543 15 -     47369 AAAACAGATGA-A--AT---------G
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29931 15 -     79414 AAAACAGATGA-A--AT---------G
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26622 15 -     34454 AAAACAGATGA-A--AT---------G
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14029 15 -     22428 AAAACAGATGA-A--AT---------G
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29175 15 -     47109 AAAACAGATGA-A--AT---------G
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237235 15 +   5703754 AAAACAGATGA-A--AT---------G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6825 15 +     21866 AAAACAGATGA-A--AT---------G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114930 19 +    313613 GGAATAGATGA-A--AT-T---AAG-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24201 15 +     27374 AAAACAGGTGA-A--AT---------G
i Semnopithecus_entellus.k141_158471                     I 2 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27715 15 +     58920 AAAACAGGTGA-A--AT---------G
i Semnopithecus_hypoleucos.k141_1910531                  I 2 C 0
s Semnopithecus_johnii.k141_843753                           14211 15 -     45317 AAAACAGGTGA-A--AT---------G
i Semnopithecus_johnii.k141_843753                       I 2 C 0
s Semnopithecus_priam.k141_714795                            21870 15 -     42441 AAAACAGGTGA-A--AT---------G
i Semnopithecus_priam.k141_714795                        I 2 C 0
s Semnopithecus_schistaceus.k141_1432920                     24548 15 -     29113 AAAACAGGTGA-A--AT---------G
i Semnopithecus_schistaceus.k141_1432920                 I 2 C 0
s Semnopithecus_vetulus.k141_244474                          27622 15 -     48123 AAAACAGGTGA-A--AT---------G
i Semnopithecus_vetulus.k141_244474                      I 2 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48132 15 +     77746 GGACTAGAAAA-T--AA---------T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857245 15 -   1910179 AGAATAGATCA-A--AT---------A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4669898 11 +  18376816 ----AAGGAAG-A--AT---------A
i Sorex_araneus.JH798187.1                               N 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867250 11 +   3870691 AGAACAGATAA----------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525              5607 16 -     97271 AGAATAAATAAAA--AT---------G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123845 15 +    196729 GGAATAGAGGA-A--AT---------G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390129 15 +   1523678 AAAACAGATGA-A--AT---------G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13088 15 +     22964 AGAACAGATAA-C--AT---------G
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1622 15 +      5583 GGAGCAGATAA-A--AT---------G
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190533 15 +    199430 AGAACACCTAA-A--AT---------G
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 4
s Tapirus_terrestris.TapTer_scaffold_755                    104485 15 -    539355 AGAACACCTAA-A--AT---------G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 4
s Tarsius_lariang.k141_1780720                                5826 15 +      6850 AAAACAGATAA-A--AT---------G
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5877 15 +     20590 AAAATAGATAA-A--AT---------G
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352085 15 - 186847797 AAAACAGATGA-A--AT---------G
i Theropithecus_gelada.CM009954.1                        I 2 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23600 15 -     33621 AGAAGAGGTTA-A--GA---------A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18746 15 -     31044 GGAACAGGTAA-A--AT---------G
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479130 15 -    610378 AGGACAGACAA-A--GT---------G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19747 15 +     26378 AAAACAGGTGA-A--AT---------G
i Trachypithecus_auratus.k141_1189070                    I 2 C 0
s Trachypithecus_crepusculus.k141_539312                     32425 15 -     78344 AAAACAGGTGA-A--AT---------G
i Trachypithecus_crepusculus.k141_539312                 I 2 C 0
s Trachypithecus_cristatus.k141_180416                       19072 15 +     25722 AAAACAGGTGA-A--AT---------G
i Trachypithecus_cristatus.k141_180416                   I 2 C 0
s Trachypithecus_francoisi.k141_1453105                      27375 15 -     62838 AAAACAGGTGA-A--AT---------G
i Trachypithecus_francoisi.k141_1453105                  I 2 C 0
s Trachypithecus_geei.k141_1001272                           27423 15 +     46913 AAAACAGGTGA-A--AT---------G
i Trachypithecus_geei.k141_1001272                       I 2 C 0
s Trachypithecus_germaini.k141_57262                          8232 15 -     28527 AAAACAGGTGA-A--AT---------G
i Trachypithecus_germaini.k141_57262                     I 2 C 0
s Trachypithecus_hatinhensis.k141_31479                      29314 15 -     64340 AAAACAGGTGA-A--AT---------G
i Trachypithecus_hatinhensis.k141_31479                  I 2 C 0
s Trachypithecus_laotum.k141_928651                          27351 15 -     63452 AAAACAGGTGA-A--AT---------G
i Trachypithecus_laotum.k141_928651                      I 2 C 0
s Trachypithecus_leucocephalus.k141_96450                     8794 15 +     22490 AAAACAGGTGA-A--AT---------G
i Trachypithecus_leucocephalus.k141_96450                I 2 C 0
s Trachypithecus_melamera.k141_591572                         2222 15 -      6147 AAAACAGGTGA-A--AT---------G
i Trachypithecus_melamera.k141_591572                    I 2 C 0
s Trachypithecus_obscurus.k141_848057                         9127 15 -     13050 AAAACAGGTGA-A--AT---------G
i Trachypithecus_obscurus.k141_848057                    I 2 C 0
s Trachypithecus_phayrei.ctg124                             254367 15 -   6242583 AAAACAGGTGA-A--AT---------G
i Trachypithecus_phayrei.ctg124                          I 2 C 0
s Trachypithecus_pileatus.k141_2622778                         391 15 +     19340 AAAACAGGTGA-A--AT---------G
i Trachypithecus_pileatus.k141_2622778                   I 2 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172256 15 -    200418 AAAACAGATAA-A--AT---------G
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 1
s Trichechus_manatus.JH594705.1                            6479389 14 -  10818551 AGAACAGATA--A--AT---------G
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832767 15 -   4065304 AGAAAGGGTAC-A--AT---------G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7087 15 -     70247 GGAAAGGAAAA-A--AT---------G
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360188 15 -  33153633 AGGACAGATAA-A--AT---------G
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 4
s Uropsilus_gracilis.UroGra_scaffold_46687                    1386 24 -     21056 AGAATAGATAA-A--ATGTGGTCAGGT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180786 15 +   5085361 AGAATAGATAA-A--AG---------G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24175 15 -     30710 AGAACAGATAA-A--AT---------G
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23082 15 -    147434 AG--CCAATAA-CCTAT---------G
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75264 15 +   5488506 agaacagataa-a--at---------G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103925 15 -    112863 AGAATAGATAA-A--AT---------G
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173025 11 -    224448 AGAGCAGATAA----------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_17732         27826 15 -     86975 AAAATAGATAA-A--GG---------G
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2303 15 +      2695 GGAACATAAAA-T--AC---------A
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751  0 -    498745 C
e Equus_caballus.CM000403.2                               21373965  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041  0 -   4378816 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4433  6 +     36723 CAGTC--------A
s Acinonyx_jubatus.LLWD01001279.1                           811762  2 +   1699592 C------------A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 11
s Acomys_cahirinus.AcoCah_scaffold_21377                     18836  6 +     63021 TGGTC--------A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 395
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414295  2 +  29979442 T------------G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 16
s Ailurus_fulgens.LNAC01001112.1                            214605  2 +    347723 t------------a
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 16
s Allactaga_bullata.AllBul_scaffold_20030                    16885  6 -     61208 TAGTT--------A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 14
s Allenopithecus_nigroviridis.k141_3755588                   46749  6 +     53615 CAGTC--------A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42710  6 +     44087 CAGTC--------A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15335  6 -     21945 CAGTC--------A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17018  6 +     32033 CAGTC--------A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71189  6 -     84148 CAGTT--------G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43428  6 -     78289 CAGTT--------G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42867  6 +     55831 CAGTT--------G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41317  6 -     64179 CAGTT--------G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22956  6 -     24835 CAGTT--------G
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39942  6 +     45454 CAGTT--------G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45588  6 +     70886 CAATT--------G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7764  6 +     30854 CAGTT--------G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31900  6 +     42133 CAGTT--------G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584124  2 +   2318259 C------------A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176103  2 -    412891 C------------A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 4
s Antilocapra_americana.AntAmePen_scaffold_21030             49223  2 -     68529 A------------A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     143  6 +     17741 CAGTC--------G
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              768  6 -     15923 CAGTC--------G
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671529  6 +   5030052 gaggc--------a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               1043  6 -     16391 CAGTC--------G
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                603  6 -     17186 CAGTC--------G
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14921  6 -     32367 AAATC--------A
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4382  2 -     15198 C------------A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 4
s Ateles_geoffroyi_b.tarseq_1536                               273651  6 +  21539123 CAGTT--------G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9819  6 +     48076 CAGTT--------G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4956  6 -     28759 CAGTT--------G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32508  6 +     44353 CAGTT--------G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47879  6 -     71267 CAGTT--------G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21938  6 -     33135 CAGTT--------G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5129  6 +     11645 CGGTT--------G
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5135  6 -     19611 CGGTT--------G
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955961  2 -  23207421 C------------A
i Balaenoptera_acutorostrata.KI537508.1                  I 4 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3170  2 -      4711 C------------A
i Balaenoptera_bonaerensis.DF507193.1                    I 4 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85119  2 +    124022 C------------A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20652  2 +    288883 c------------a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355039  2 +  48749331 C------------A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753607  2 +   1948126 C------------A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543746  2 -  45695690 C------------A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528770  2 -   4408762 C------------A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6839  6 +     28062 CAGTT--------G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42133  6 -     91139 CAGTT--------G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19659  6 +     95584 CAGTT--------G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19572  6 +    119600 CAGTT--------G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9125  6 +     18648 TAGTT--------G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8664  6 -     13885 CAGTT--------G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             732  6 -      8861 CAGTT--------G
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453125  6 + 189096842 CAGTT--------G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                647  6 +      8664 CAGTT--------G
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629945  6 +  17673402 C----AGTC----A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664231  6 +   7040546 C----AGTC----A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207891  6 +   1652518 C----AGTC----A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504310  2 +  60362399 T------------A
i CanFam4.chr16                                          C 0 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7946  2 -     23171 T------------A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 4
s Canis_lupus_dingo.QKWQ01000480.1                          221289  2 +   9314153 T------------A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 4
s Canis_lupus_familiaris.chr16                            41614424  2 +  59632846 T------------A
i Canis_lupus_familiaris.chr16                           C 0 I 4
s Canis_lupus_orion.HG994398.1                            45106005  2 -  63665305 T------------A
i Canis_lupus_orion.HG994398.1                           C 0 I 4
s Capra_aegagrus.CM003241.1                               27407836  2 -  46296322 C------------A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590109  2 +  44709034 C------------A
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_108409                   6948  6 +      8835 CAGTT--------A
i Capromys_pilorides.CapPil_scaffold_108409              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269215  6 +    496798 cagtt--------A
i Carlito_syrichta.NW_007259797.1                        C 0 I 5
s Carollia_perspicillata.CarPer_scaffold_668536                317  2 -      1021 C------------A
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 I 4
s Cavia_aperea.AVPZ01000300.1                              4995022  6 +  23392119 CAATC--------A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998464  6 +  23407841 CAATC--------A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61565  6 -     66877 CAATC--------A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4043  6 -     12580 TAGTT--------G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42100  6 +     53515 TAGTT--------G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370032  6 -  26074798 CAGTC--------A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6921  6 -     34880 CAGTC--------A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66016  6 -     89041 CAGTC--------A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1146  6 -      5494 CAGCT--------A
i Cephalopachus_bancanus.k141_1689090                    C 0 I 3
s Ceratotherium_simum.JH767749.1                          15491100  2 -  27778364 C------------A
i Ceratotherium_simum.JH767749.1                         I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17933  2 +     27315 C------------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 4 C 0
s Cercocebus_atys.KQ010504.1                                139932  6 -   4669795 CAGTC--------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43674  6 +     47900 CAGTC--------A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43501  6 -     44860 CAGTC--------A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43487  6 -    148725 CAGTC--------A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25704  6 -     40656 CAGTC--------A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5670  6 +     20796 CAGTC--------A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10747  6 -     17524 CAGTC--------A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26469  6 -     34525 CAGTC--------A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10290  6 -     25376 CAGTC--------A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362890  6 -  39242232 CAGTC--------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268602  6 +  21565898 CAGTC--------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30936  6 -     45857 CAGTC--------A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25876  6 -     32606 CAGTC--------A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2034  6 +      8499 CAGTC--------A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24432  6 +     70610 CAGTC--------A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21361  6 +     36323 CAGTC--------A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11727  6 -     19938 CAAAA--------G
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29548  6 -     33796 CAGTT--------G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4065  6 -     15404 CAGTT--------G
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7923  6 -     32913 CAGTC--------G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18336  6 -     40346 CAGTC--------G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18591  6 +    216457 CAGTC--------G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18384  6 +     39636 CAGTC--------G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237502  6 -   2543920 TAGTC--------A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2973  6 +      5346 CAGTC--------G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41468  6 -    112038 CAGTT--------G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7039  6 +     34062 CAGTT--------G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342252  6 +  18827391 CAGTC--------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8798  6 -     44032 CAGTC--------A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303576  6 - 135778131 CAGTC--------A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13043  6 +     15858 CAAAA--------G
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            604619  6 -    839153 CAAAA--------G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408014  6 -   2368649 CAGTC--------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377889  6 - 200372422 CAGTC--------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1438  6 -     84244 CAGTC--------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806158  2 +  53390261 c------------a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1726  2 -      8242 A------------G
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 12
s Cricetomys_gambianus.CriGam_scaffold_14425                 41158  2 -     83289 CT------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 19
s Cricetulus_griseus.LT883664.1                          213113610  6 - 224834208 TGGTC--------A
i Cricetulus_griseus.LT883664.1                          C 0 I 22
s Crocidura_indochinensis.CroInd_scaffold_77846               6055 10 +     12657 C----CTTCGCAGA
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3223  2 +     87169 C------------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 4
s Ctenodactylus_gundi.CteGun_scaffold_65                    643849  6 -   1526836 TAGTA--------A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16489  6 +     50838 TAGCT--------A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2966  6 +     36344 CAATC--------A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26724  3 +     75252 ---TC--------A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109070  6 -   2246927 CAAAA--------G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291500  6 +  12879189 CAGTC--------A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624290  2 -  35494412 C------------A
i Delphinapterus_leucas.KZ290073.1                       I 4 C 0
s Desmodus_rotundus.PEHR01003915.1                             158  2 +       233 C------------A
i Desmodus_rotundus.PEHR01003915.1                       C 0 I 4
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663391  2 -   1390856 C------------A
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 4 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138177  2 -    198055 C------------A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 4 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97537  6 -    115145 TAGCC--------A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949228  6 -  37912305 TAGCA--------A
i Dipodomys_ordii.KN672350.1                             C 0 I 6
s Dipodomys_stephensi.DipSte_scaffold_89095                   4175  6 -     10735 TTGCA--------A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 5
s Dolichotis_patagonum.DolPat_scaffold_80628                  8991  6 +     14636 CAATC--------A
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853671  6 - 111700974 CAGTT--------G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238510  2 -    607251 C------------A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107470  6 -  10337057 CAGTA--------G
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29885  6 +    110024 CGGTC--------A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 20
s Ellobius_talpinus.LOJH01026522.1                           11860  6 +     18970 CTGTC--------A
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 20
s Enhydra_lutris.KZ291758.1                               24915032  2 +  41312741 T------------A
i Enhydra_lutris.KZ291758.1                              C 0 I 30
s Eptesicus_fuscus.JH977646.1                             12577756  2 +  14770903 T------------A
i Eptesicus_fuscus.JH977646.1                            C 0 I 4
s Erinaceus_europaeus.JH835339.1                           3664398  2 +   7059049 C------------A
i Erinaceus_europaeus.JH835339.1                         I 4 C 0
s Erythrocebus_patas.Contig38                               261779  6 +  21539334 CAGTC--------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63840  2 -    133382 C------------A
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 4 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4057  2 +      7672 C------------A
i Eubalaena_japonica.EubJap_flattened_line_118172        I 4 C 0
s Eulemur_albifrons.k141_51491                               13673  6 -     24895 CAGCC--------A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41382  6 -     70999 CAGCC--------A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85344  6 +    112731 CAGCC--------A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41913  6 +     68309 CAGCC--------A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52239  6 -     65740 CAGCC--------A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22868  6 -     75513 CAGCC--------A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47065  6 -     97555 CAGCC--------A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3790  6 +     30972 CAGCC--------A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41510  6 -     52037 CAGCC--------A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57912  6 -    111500 CAGCC--------A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245675  2 - 206538554 C------------A
i Felis_catus.CM001381.2                                 C 0 I 11
s Felis_catus_fca126.CM031415.1                          185115460  2 - 205367284 C------------A
i Felis_catus_fca126.CM031415.1                          C 0 I 11
s Felis_nigripes.FelNig_flattened_line_31944                 26562  2 -     30238 C------------A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 7
s Galago_moholi.ctg3793                                     123436  6 -    137831 CAGCC--------C
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             6981  6 +     22493 CAGCC--------C
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19032  6 -     32986 TAGCC--------T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               17993  6 +     18121 CAGTC--------C
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90189  2 -     95226 C------------A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33112  6 -     36801 TAGTC--------A
i Glis_glis.GliGli_scaffold_33859                        I 3 C 0
s Gorilla_beringei.k141_3358147                               4735  6 -      8343 CAGTC--------A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253747  6 - 186649187 CAGTC--------A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     609  6 -     78134 TAGTC--------A
i Graphiurus_murinus.GraMur_scaffold_10447               I 3 C 0
s Hapalemur_alaotrensis.k141_330369                          13598  6 -     40692 CAGCC--------A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35000  6 +     49394 CAGCC--------A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59868  6 -     66874 CAGCC--------A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8742  6 -     42923 CAGCC--------A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15742  6 -     53142 CAGCC--------A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29700  2 -    327341 C------------A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 4
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7943  2 +     48891 C------------A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1926131  4 -  22651954 --GTC--------A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                5882  6 +      6687 CAGTC--------A
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6553  2 -     36432 C------------A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 4 I 8
s Hipposideros_galeritus.HipGal_scaffold_23202               49717  2 +     49977 T------------G
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 12
s Hoolock_leuconedys.ctg274                                    141755  6 -    630532 CAGTC--------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68619  2 +     83186 C------------A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 4
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70409  6 +    143317 CAATC--------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4790  6 +     12352 CAGTC--------A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11974  6 +     55766 CAGTC--------A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051572  6 + 191637585 CAGTC--------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800450  6 +  11177569 CAGTC--------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3087  6 -    135385 CTGTC--------A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 19
s Ictidomys_tridecemlineatus.JH393364.1                     385685  6 +   7955117 TATTC--------A
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Indri_indri.k141_2415743                                    1252  6 +     11955 CAGTT--------G
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2077  2 -     16823 C------------A
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 4 C 0
s Jaculus_jaculus.JH725527.1                               1238438  6 +   9596543 tagtt--------a
i Jaculus_jaculus.JH725527.1                             I 369 I 14
s Kogia_breviceps.KogBre_flattened_line_3970                 64556  2 -     97402 C------------A
i Kogia_breviceps.KogBre_flattened_line_3970             I 4 C 0
s Lagothrix_lagothricha.k141_246028                          42195  6 +    110728 CAGTT--------G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61619  2 -     65777 G------------A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 4
s Lemur_catta.scaffold_24                                 14758391  6 +  30322482 CAGCC--------A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3111  6 -     13097 CAGTC--------G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2865  6 +      5940 CAGTC--------G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2695  6 -      5717 CAGTC--------G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9060  6 -     11567 CAGTT--------G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10441  6 -     12945 CAGTT--------G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7920  6 +     29618 CAGTT--------G
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7916  6 +     31569 CAGTT--------G
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7926  6 +     24756 CAGTT--------G
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7926  6 +     16388 CAGTT--------G
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812444  2 -   3914936 T------------A
i Leptonychotes_weddellii.KB714746.1                     C 0 I 16
s Lepus_americanus.LepAme_scaffold_56121                     16770  6 +     24238 TAGTC--------A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333597  2 +    662738 C------------A
i Lipotes_vexillifer.KE559953.1                          I 4 C 0
s Lophocebus_aterrimus.ctg367                               331885  6 -   1826925 CAGTC--------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9193  6 +     19643 CCGCC--------A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5042854  6 -   6120653 CCGCC--------A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39079944  6 +  43346337 caatt--------g
i Loxodonta_africana.GL010049.1                          C 0 I 3
s Lycaon_pictus.CM007581.1                                41613579  2 +  59628241 T------------A
i Lycaon_pictus.CM007581.1                               C 0 I 4
s Macaca_arctoides.k141_1757516                              44201  6 -     61512 CAGTC--------A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371863  6 -  60120075 CAGTC--------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24126  6 +     30207 CAGTC--------A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21229  6 -     24934 CAGTC--------A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24079  6 +     30527 CAGTC--------A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35255  6 -     50087 CAGTC--------A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  44999  6 +     51645 CAGTC--------A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414202  6 - 187317192 CAGTC--------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398432  6 +  25927173 CAGTC--------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47604  6 -     62418 CAGTC--------A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  142  6 +     14901 CAGTC--------A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44076  6 +     59329 CAGTC--------A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269984  6 +    668171 CAGTC--------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  260  6 +      1732 CAGTC--------A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1782  6 +     17132 CAGTC--------A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321281  6 +  24302211 CAGTC--------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356113  6 -    752769 CAGTC--------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672469  2 -    737560 C------------A
i Manis_javanica.JSZB01003497.1                          C 0 I 4
s Manis_pentadactyla.KN006162.1                             219756  2 +    317179 C------------A
i Manis_pentadactyla.KN006162.1                          C 0 I 4
s Marmota_marmota.CZRN01000018.1                           7499906  6 +  40650429 TAGTC--------A
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149316  2 +    207569 T------------G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 12
s Mellivora_capensis.MelCap_flattened_line_19308             25136  2 -     74585 T------------A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 30
s Meriones_unguiculatus.MerUng_scaffold_7390                 47956  6 -    140813 TGGTC--------G
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 668
s Mesocricetus_auratus.KB708134.1                         17428156  6 +  29670104 TGGTC--------A
i Mesocricetus_auratus.KB708134.1                        C 0 I 20
s Mesoplodon_bidens.MesBid_scaffold_6114                     80141  2 +     93471 C------------A
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 4 C 0
s Mico_argentatus.k141_582562                                 9234  6 +     17804 TAGTT--------G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9736  6 -     12984 TAGTT--------G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18050  6 -     26561 TAGTT--------G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983530  6 +  93316391 CAGTT--------G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44709  6 +    145209 CAGTT--------G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 33
s Micronycteris_hirsuta.MicHir_scaffold_2233                184072  2 +    200668 C------------A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 35
s Microtus_ochrogaster.CM001695.1                         15961297  6 +  27267610 TGGTC--------A
i Microtus_ochrogaster.CM001695.1                        C 0 I 20
s Miniopterus_natalensis.LDJU01000034.1                    6362174  2 -   8254450 T------------A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 4
s Miniopterus_schreibersii.MinSch_scaffold_23309             41075  2 -     48117 T------------A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 4
s Miopithecus_ogouensis.k141_1534655                         21290  6 -     27822 CAGTC--------A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7452  2 +     27589 T------------A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 16
s Mirza_zaza.k141_766280                                     51319  6 -     62432 CAGTT--------G
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352033  2 +    437263 C------------A
i Monodon_monoceros.MonMon_M_scaffold_103                I 4 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178234  2 +    366855 C------------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 4
s Moschus_moschiferus.MosMos_scaffold_13123                  23238  2 -     82753 C------------A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17453  2 -     63510 C------------A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 4
s Murina_feae.MurFea_scaffold_17764                          38114  2 +     47283 T------------A
i Murina_feae.MurFea_scaffold_17764                      C 0 I 4
s Mus_caroli.LT608237.1                                   35591831  6 + 120012414 TGATC--------A
i Mus_caroli.LT608237.1                                  C 0 I 20
s Mus_musculus.chr8                                       41686190  6 + 129401213 TGGTC--------A
i Mus_musculus.chr8                                      C 0 I 20
s Mus_pahari.LT608297.1                                   58216076  6 +  89631738 TGGTC--------A
i Mus_pahari.LT608297.1                                  C 0 I 20
s Mus_spretus.CM004101.1                                  39495511  6 + 130317789 TGGTC--------A
i Mus_spretus.CM004101.1                                 C 0 I 20
s Muscardinus_avellanarius.MusAve_scaffold_12866             81692  6 -     86153 TAATC--------A
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 3 C 0
s Mustela_putorius.JH418006.1                             14354068  2 +  14710649 T------------A
i Mustela_putorius.JH418006.1                            C 0 I 30
s Myotis_brandtii.KE162005.1                               9792366  2 +  10118263 T------------A
i Myotis_brandtii.KE162005.1                             C 0 I 4
s Myotis_davidii.KB100139.1                                4386525  2 +   6019432 T------------A
i Myotis_davidii.KB100139.1                              C 0 I 4
s Myotis_lucifugus.GL429869.1                               382345  2 +   4330536 T------------A
i Myotis_lucifugus.GL429869.1                            C 0 I 4
s Myotis_myotis.MyoMyo_scaffold_66571                         1173  2 +     18357 T------------A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118521  6 +    130748 CAAAA--------G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             944978  6 +   3037898 TAGTC--------A
i Nannospalax_galili.KL204047.1                          C 0 I 20
s Nasalis_larvatus.k141_1350636                              27940  6 +     34575 CAGTC--------A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468047  2 -  31847680 T------------A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 16
s Neophocaena_asiaeorientalis.KZ687982.1                   1226202  2 -   7148211 C------------A
i Neophocaena_asiaeorientalis.KZ687982.1                 I 4 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126945  2 -    149072 C------------A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 3
s Nomascus_annamensis.k141_1771965                           52682  6 -    132029 CAGTC--------A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8777  6 -     16345 CAGTC--------A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14662  6 +     22201 CAGTC--------A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412883  6 -  22158432 CAGTC--------A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25060  6 -     54323 CAGTC--------A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197172  2 +   9404916 T------------A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 4
s Nycticebus_bengalensis.LG01                             93635189  6 + 196305487 CAGCC--------A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             1947  6 -      3937 CAGCC--------A
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563428  6 - 199412804 CAGCC--------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550135  6 -   3988456 TGGTC--------A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053158  6 -  11899542 CCATT--------A
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450643  2 +   2017862 T------------A
i Odobenus_rosmarus.KB229312.1                           C 0 I 16
s Odocoileus_virginianus.KZ100018.1                         435081  2 -    630418 C------------A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13073  2 +    150152 C------------A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91656  6 -    140218 TGGTC--------A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 20
s Onychomys_torridus.OnyTor_scaffold_28377                    2515  6 -     41509 TGGTC--------A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 20
s Orcinus_orca.KB316932.1                                  8095472  2 +  10937097 C------------A
i Orcinus_orca.KB316932.1                                I 4 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12561  6 -     14239 CAGTA--------G
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102606  6 - 174332312 TAGTC--------A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38218  2 +    559221 T------------A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 4
s Otolemur_crassicaudatus.k141_649260                        38589  6 -     51505 CAGTC--------C
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351592  6 +   1103335 CAGCC--------C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403063  2 -  44047080 C------------A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3582  2 +     17875 C------------A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471776  6 - 189151597 CAGTC--------A
i Pan_troglodytes.CM009242.2                             I 15 I 59
s Panthera_onca.PanOnc_flattened_line_3271                   23383  2 -    230217 C------------A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 11
s Panthera_pardus.KV860321.1                              18460709  2 -  18783137 C------------A
i Panthera_pardus.KV860321.1                             C 0 I 11
s Panthera_tigris.KE722367.1                               3971429  2 +   8748460 C------------A
i Panthera_tigris.KE722367.1                             C 0 I 11
s Pantholops_hodgsonii.KE114653.1                          1614505  2 +   2937107 C------------A
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242114  6 - 183742232 CAGTC--------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8576  6 +     21308 CAGTC--------A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291150  6 -  20919399 CAGTC--------A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21224  6 -     27687 CAGTC--------A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14370  6 +     16796 CAGTC--------A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21181  6 -     23640 CAGTC--------A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14022  2 +     78924 C------------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 4
s Perodicticus_ibeanus.k141_1921260                          24869  6 +     31479 CAACC--------A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17237  6 -     24908 CAACC--------A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         592  6 +      9367 TAGCA--------A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 6
s Peromyscus_maniculatus.KI615324.1                         245736  6 +  18517816 TGGTC--------A
i Peromyscus_maniculatus.KI615324.1                      C 0 I 20
s Petromus_typicus.PetTyp_scaffold_17301                     30978  6 -     56120 TGACC--------C
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11330  2 -     15039 C------------A
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 4 C 0
s Piliocolobus_badius.k141_2704958                            1389  6 +     55023 CAGTC--------A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          939  6 -     89929 CAGTC--------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1528  6 +     40849 CAGTC--------A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253192  6 +  14605196 CAGTC--------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2697  2 +     22231 T------------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 4
s Pithecia_albicans.k141_1239476                             63832  6 +    207309 CCGTT--------G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4925  6 -     25401 CCGTT--------G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30668  6 +     58159 CCGTT--------G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30944  6 +     63561 CCGTT--------G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30704  6 +     51148 CCGTT--------G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555674  6 -   4542175 CCGTT--------G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30688  6 +     51125 CCGTT--------G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3414  2 -      8168 C------------A
i Platanista_gangetica.PlaMin_flattened_line_167872      I 4 C 0
s Plecturocebus_bernhardi.k141_2549090                        7091  6 +     39866 CAGTT--------G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2175  6 -      9282 CAGTT--------G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41579  6 -     87950 CAGTT--------G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41973  6 -     88961 CAGTT--------G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6671  6 -     39403 CAGTT--------G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41622  6 +     87928 CAGTT--------G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6668  6 -     60166 CAGTT--------G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13605  6 -     67232 CAGTT--------G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41521  6 -     90634 CAGTT--------G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42988  6 +     89403 CAGTT--------G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176900  6 - 189387572 CAGTC--------A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191717  6 -   9816681 CAGTC--------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26523  6 +     69807 CAGTC--------A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43719  6 -     80239 CAGTC--------A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2268  6 +      3019 CAATC--------A
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 I 3
s Prolemur_simus.MPIZ01000396.1                            1981546  6 +   4620579 CAGCC--------A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565013  6 -   2598838 TGGTT--------G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2649  6 -      7103 CAGTT--------G
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3246  6 -     11706 CGGTT--------G
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6982  6 -     30655 CGGTT--------G
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33307  6 +     46564 CGGTT--------G
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93578  6 -     98465 CGGTT--------G
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7215  6 +     35169 CGGTT--------G
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            35555  6 +     52041 TGGTC--------A
i Psammomys_obesus.NESX01036366.1                        C 0 I 476
s Pteronotus_parnellii.KE847780.1                            51117  2 -     66298 C------------A
i Pteronotus_parnellii.KE847780.1                        C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3635  2 -     18639 T------------A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 30
s Puma_concolor.QAVW01001104.1                            18098023  2 +  38429054 C------------A
i Puma_concolor.QAVW01001104.1                           C 0 I 11
s Pygathrix_cinerea.k141_1153803                             25897  6 +     91421 CAGTC--------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152391  6 -   7812017 CAGTC--------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6764  6 +     72585 CAGTC--------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52000  2 +     55069 C------------A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021434  6 -  90668790 TGGTC--------A
i Rattus_norvegicus.chr16                                C 0 I 20
s Rhinolophus_sinicus.LVEH01000134.1                       2913735  2 +   3329780 T------------G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 12
s Rhinopithecus_bieti.k119_778604                              469  6 +      7119 CAGTC--------A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121077  6 + 195417433 CAGTC--------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235319  6 -   7961872 CAGTC--------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               2971  6 +     27962 CAGTC--------G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2866  6 +      6077 CAGTC--------G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2957  6 +      5971 CAGTC--------G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2879  6 +      5932 CAGTC--------G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1221  6 -      4390 CAGTC--------G
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390656  6 - 209938924 CAGTC--------G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2828  6 +      5979 CAGTC--------G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3590  6 -      4301 CAGTC--------A
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6655  2 +     16473 C------------A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1107997  6 + 121099817 CAGTC--------A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29558  6 -     47369 CAGTC--------A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29946  6 -     79414 CAGTC--------A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26637  6 -     34454 CAGTC--------A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14044  6 -     22428 CAGTC--------A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29190  6 -     47109 CAGTC--------A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237250  6 +   5703754 CAGTC--------A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6840  6 +     21866 CAGTC--------A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114949  2 +    313613 C------------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24216  6 +     27374 CAGTC--------A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27730  6 +     58920 CAGTC--------A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14226  6 -     45317 CAGTC--------A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21885  6 -     42441 CAGTC--------A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24563  6 -     29113 CAGTC--------A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27637  6 -     48123 CAGTC--------A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48147  6 +     77746 TGGTC--------A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 19
s Solenodon_paradoxus.SolPar_flattened_line_126            1857260  2 -   1910179 C------------A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4669909  2 +  18376816 C------------A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867264  6 +   3870691 TAGTC--------A
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5623  2 -     97271 T------------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 15
s Suricata_suricatta.SurSur_flattened_line_6629             123860  2 +    196729 C------------A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 4
s Symphalangus_syndactylus.tarseq_199                       390144  6 +   1523678 CAGTC--------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13103  2 +     22964 T------------A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 4
s Tamandua_tetradactyla.TamTet_scaffold_224794                1637  6 +      5583 CAAAA--------G
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190552  2 +    199430 C------------A
i Tapirus_indicus.TapInd_scaffold_7432                   I 4 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104504  2 -    539355 C------------A
i Tapirus_terrestris.TapTer_scaffold_755                 I 4 C 0
s Tarsius_lariang.k141_1780720                                5841  6 +      6850 CAGTT--------A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5892  6 +     20590 CAGTT--------A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352100  6 - 186847797 CAGTC--------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23615  6 -     33621 CGGTC--------A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18761  6 -     31044 CAAAA--------G
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479145  2 -    610378 C------------A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 4
s Trachypithecus_auratus.k141_1189070                        19762  6 +     26378 CAGTC--------A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32440  6 -     78344 CAGTC--------A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19087  6 +     25722 CAGTC--------A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27390  6 -     62838 CAGTC--------A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27438  6 +     46913 CAGTC--------A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8247  6 -     28527 CAGTC--------A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29329  6 -     64340 CAGTC--------A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27366  6 -     63452 CAGTC--------A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8809  6 +     22490 CAGTC--------A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2237  6 -      6147 CAGTC--------A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9142  6 -     13050 CAGTC--------A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254382  6 -   6242583 CAGTC--------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         406  6 +     19340 CAGTC--------A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172272  2 -    200418 C------------A
i Tragulus_javanicus.TraJav_scaffold_3462                I 1 C 0
s Trichechus_manatus.JH594705.1                            6479403  6 -  10818551 CAATC--------G
i Trichechus_manatus.JH594705.1                          C 0 I 3
s Tupaia_chinensis.KB320699.1                              1832782  6 -   4065304 CAATC--------A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7102  6 -     70247 CAATC--------A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360207  2 -  33153633 C------------A
i Tursiops_truncatus.MRVK01000835.1                      I 4 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    1410  2 -     21056 C------------A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180801  2 +   5085361 T------------G
i Ursus_maritimus.KK499267.1                             C 0 I 16
s Varecia_rubra.k141_787544                                  24190  6 -     30710 CAGCC--------A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23097  6 -    147434 CAGCC--------A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75279  6 +   5488506 C----AGTC----A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103940  2 -    112863 T------------A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 4
s Xerus_inauris.XerIna_scaffold_2302                        173039  6 -    224448 CAGTC--------A
i Xerus_inauris.XerIna_scaffold_2302                     I 3 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27841  2 -     86975 T------------A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 16
s Zapus_hudsonius.ZapHud_scaffold_230229                      2318  6 +      2695 CAGTT--------A
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 15
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73758  4 -    116970 I
e Pteropus_vampyrus.KN525825.1                             3536345  4 -   4952924 I
e Pteropus_alecto.KB030862.1                               5839836  4 -  28871421 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                222151  4 -    270270 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Equus_przewalskii.KK951119.1                              410751  0 -    498745 C
e Equus_caballus.CM000403.2                               21373965  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040041  0 -   4378816 C
e Eidolon_helvum.AWHC01266696.1                               5186  4 +     19438 I
e Catagonus_wagneri.CatWag_scaffold_2839                     78311  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4439 59 +     36723 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-CTACAG-A-----------ATG--CG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
s Acinonyx_jubatus.LLWD01001279.1                           811775 51 +   1699592 --------------------------TGGA--AAAT-GAC-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTAC-C-ATTCTAG-C
i Acinonyx_jubatus.LLWD01001279.1                        I 11 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     19237 36 +     63021 ----------------------------------------------CT-ATACAG-A-----------ATT--AT--A------A------------------AG-----------------CAG-CA--ATAA-T-GTTTTAG-A
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 395 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414313 42 +  29979442 --------------------------------------AT-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CA-GGTGA-C-ATTCTAG-C
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 16 C 0
s Ailurus_fulgens.LNAC01001112.1                            214623 42 +    347723 --------------------------------------at-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTGA-C-ATTCTAG-C
i Ailurus_fulgens.LNAC01001112.1                         I 16 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16905 21 -     61208 ------------------------------------------------------------------------------------A------------------AT-----------------AAT-TA--ATAA-T-AGTTGAG-A
i Allactaga_bullata.AllBul_scaffold_20030                I 14 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46755 59 +     53615 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42716 59 +     44087 ATA-ATGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15341 59 -     21945 ATA-ATGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17024 59 +     32033 ATA-ATGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71195 59 -     84148 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CGT-CA--GTAA-C-ATTTTAG-C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43434 59 -     78289 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CGT-CA--GTAA-C-ATTTTAG-C
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42873 59 +     55831 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CGT-CA--GTAA-C-ATTTTAG-C
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41323 59 -     64179 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CGT-CA--GTAA-C-ATTTTAG-C
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           22962 59 -     24835 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--GTTA-C-ATTTTAG-C
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             39948 59 +     45454 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--GTTA-C-ATTTTAG-C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45594 59 +     70886 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATAGAG-A-----------ATA--AG--A------A------------------AG-----------------CGT-CA--GTAA-C-ATTTTAG-C
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7770 59 +     30854 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CGT-CA--GTAA-C-ATTTTAG-C
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31906 59 +     42133 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CGT-CA--GTAA-C-ATTTTAG-C
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584126 64 +   2318259 ATA-AT-C---T-----T--A-----TGGA--AGAT-CAT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-TAA-GTAA-T-AGTGAAA-C
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176109 60 -    412891 GTT-AC-CC--------T--G-----TGGA--ATAT-CCC-CTT--CG-GAGCAG-G-----------GT----AAGA------A------------------AG-----------------CAG-CAA-GTAA-C-ATTCTAG-C
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49225 64 -     68529 ATA-AT-C---T-----T--A-----TGAA--AGAT-CAT-CTT--CT-ACACAG-C-----------AT----G--AATGAAGA------------------AG-----------------TAA-GAA-GTAA-T-AGTAAAA-C
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     149 59 +     17741 ATA-ACAC---------T--A-----TGAA--AAAT-CAG-TTT--CT-ATACAT-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              774 59 -     15923 ATA-ACAC---------T--A-----TGAA--AAAT-CAG-TTT--CT-ATACAT-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671535 53 +   5030052 acacaaca---------t--a-----tcta--caac-ctg-tct--cttatacac-atctagatgtgtata--ag--a------g------------------a------------------------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               1049 59 -     16391 ATA-ACAC---------T--A-----TGAA--AAAT-CAG-TTT--CT-ATACAT-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                609 59 -     17186 ATA-ACAC---------T--A-----TGAA--AAAT-CAG-TTT--CT-ATACAT-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14927 56 -     32367 ATT-GC-CC--------TATG-----AG----AGA----T-ATT--TT-ACACAA-T-----------ATT--CA--A------A------------------AG-----------------TAC-AA--ATAA-T-ATTTTAG-C
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4388 60 -     15198 GTT-AC-CC--------T--G-----TGGA--ACAT-CCC-CTT--CT-GAGCAG-G-----------GT----GAGA------A------------------AG-----------------CAG-CAA-GTAA-C-ATTCTAG-C
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 4 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273657 59 +  21539123 GTA-ACAC---------T--G-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--ATAA-C-GTTTTAG-C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9825 59 +     48076 GTA-ACAC---------T--A-----TGAA--AAGT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CGT-CA--ATAA-C-GTTTTAG-C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   4962 59 -     28759 GTA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATTCAG-A-----------ATA--AG--A------A------------------AG-----------------CGT-CA--ATAA-C-ATTTAAG-C
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32514 59 +     44353 GTA-ACAC---------T--G-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--ATAA-C-GTTTTAG-C
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47885 59 -     71267 GTA-ACAC---------T--A-----TGAA--AAGT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CGT-CA--ATAA-C-GTTTTAG-C
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                21944 59 -     33135 GTA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CGT-CA--ATAA-C-GTTTTAG-C
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5135 58 +     11645 ATG-AT-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------CAC-CA--ATAA-C-GTTTTAG-C
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5141 58 -     19611 ATG-AT-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------CAC-CA--ATAA-C-GTTTTAG-C
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7955963 61 -  23207421 ATT-TT-CC--------T--A-----TGGA--AAAT-CAC-CTT--CC-ATACAG-C-----------GT----G--AA--A--A------------------AG--T--------------TAT-TAA-GTCA-T-AGTTAAA-C
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3172 61 -      4711 ATT-TT-CC--------T--A-----TGGA--AAAT-CAC-CTT--CC-ATACAG-C-----------GT----G--AA--A--A------------------AG--T--------------TAT-TAA-GTCA-T-AGTTAAA-C
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85121 60 +    124022 ATA-AT-T---T-----T--A-----TGGA--AGAT-CCT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-T-----AA-T-AGTGAAA-C
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20654 64 +    288883 ata-at-c---T-----T--A-----TGGA--AGAT-CAT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-TAA-GTAA-T-AGTAAAA-C
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355041 64 +  48749331 ATA-AT-C---T-----T--A-----TGGA--AGAT-CAT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-TAA-GTAA-T-AGTAAAA-C
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753609 64 +   1948126 ATA-AT-C---T-----T--G-----TAGA--AGAT-CAT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-TAA-GTAA-T-AGTAAAA-C
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543748 64 -  45695690 ATA-AT-C---T-----T--A-----TGGA--AGAT-CAT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-TAA-GTAA-T-AGTAAAA-C
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528772 64 -   4408762 ATA-GT-C---T-----T--A-----TGGA--AGAT-CAT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-TAA-GTAA-T-AGTAAAA-C
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6845 59 +     28062 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--ATAA-C-GTTTTAG-C
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42139 59 -     91139 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--ATAA-C-GTTTTAG-C
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19665 59 +     95584 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--ATAA-C-GTTTTAG-C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19578 59 +    119600 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--ATAA-C-GTTTTAG-C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9131 59 +     18648 ATA-ACAC---------T--A-----CGAA--AAAT-CGT-TTT--TT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8670 59 -     13885 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------AAA--GT--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             738 59 -      8861 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453131 59 + 189096842 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                653 59 +      8664 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7629951 60 +  17673402 ATT-AT-CC--------T--A-----TAGA--AAAT-CTT-CTT--CC-ACATAG-T-----------AT----G--AA-G---A------------------AG-----------------TGT-CAA-GTAA-C-ATTCAAG-C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664237 60 +   7040546 ATT-AT-CC--------T--A-----TAGA--AAAT-CTT-CTT--CC-ACATAG-T-----------AT----G--AA-G---A------------------CG-----------------TGT-CAA-GTAA-C-ATTCAAG-C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207897 60 +   1652518 ATT-AT-CC--------T--A-----TAGA--AAAT-CTT-CTT--CC-ACATAG-T-----------AT----G--AA-G---A------------------AG-----------------TGT-CAA-GTAA-C-ATTCAAG-C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504316 60 +  60362399 ATT-TC-CC--------T--A-----TGGA--AAGT-CAC-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTGA-T-ATTCTAA-C
i CanFam4.chr16                                          I 4 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     7952 60 -     23171 ATT-TC-CC--------T--A-----TGGA--AAGT-CAC-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTGA-T-ATTCTAA-C
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 4 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221295 60 +   9314153 ATT-TC-CC--------T--A-----TGGA--AAGT-CAC-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTGA-T-ATTCTAA-C
i Canis_lupus_dingo.QKWQ01000480.1                       I 4 C 0
s Canis_lupus_familiaris.chr16                            41614430 60 +  59632846 ATT-TC-CC--------T--A-----TGGA--AAGT-CAC-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTGA-T-ATTCTAA-C
i Canis_lupus_familiaris.chr16                           I 4 C 0
s Canis_lupus_orion.HG994398.1                            45106011 60 -  63665305 ATT-TC-CC--------T--A-----TGGA--AAGT-CAC-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTGA-T-ATTCTAA-C
i Canis_lupus_orion.HG994398.1                           I 4 C 0
s Capra_aegagrus.CM003241.1                               27407838 64 -  46296322 ATA-AT-C---T-----T--A-----TGGA--AGAT-CAT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-TAA-GTAA-T-AGTAAAA-C
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590111 64 +  44709034 ATA-AT-C---T-----T--A-----TGGA--AGAT-CAT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-TAA-GTAA-T-AGTAAAA-C
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_108409                   6954 61 +      8835 ATT-GT-C---T-----TATG-----AAGA--AAAT-CCT-CTT--CT-ATAAAG-A-----------CTT--GA--A------A------------------AG-----------------ACT-CA--GTAA-C-ATTTTAG-T
i Capromys_pilorides.CapPil_scaffold_108409              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269226 50 +    496798 --------------------------TGAA--AAAT-TTC-CTT--CT-ATACAG-A-----------ATA--AT--A------A------------------AG-----------------CAT-GA--ATAA-C-ATGTTAA-C
i Carlito_syrichta.NW_007259797.1                        I 5 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                323 60 -      1021 GTT-AC-CC--------T--G-----TGGA--GCGT-CCC-CTT--CA-GAGCAG-G-----------GG----GAGG------A------------------AG-----------------CCA-CAA-GTAA-C-ATTGGAG-C
i Carollia_perspicillata.CarPer_scaffold_668536          I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78311  3 -    217609 ---------------------------------------------------------------------------------------------------------------------------------------T-G-------C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995028 61 +  23392119 ATT-AT-C---T-----TATG-----AAGA--AAAT-CCT-GTT--CT-ACACAG-C-----------CTT--AG--A------A------------------AG-----------------ATT-CA--GCAA-C-ATTTTAG-T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998470 61 +  23407841 ATT-AT-C---T-----TATG-----AAGA--AAAT-CCT-GTT--CT-ACACAG-C-----------CTT--AG--A------A------------------AG-----------------ATT-CA--GCAA-C-ATTTTAG-T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61571 61 -     66877 ATT-AT-C---T-----TATG-----AAGA--AAAT-CCT-GTT--CT-ACACAG-C-----------CTT--AG--A------A------------------AG-----------------ATT-CA--GCAA-C-ATTTTAG-T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4049 59 -     12580 ATA-ACAC---------T--A-----CGAA--AAAT-TGT-TTT--TT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42106 60 +     53515 ATA-ACAC---------T--A-----CGAA--AAAT-TGTTTTT--TT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370038 59 -  26074798 ATA-AACC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATAAAG-A-----------ATA--AG--A------A------------------AA-----------------CAT-CA--ATAA-T-GTTTTAG-C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6927 59 -     34880 ATA-AACC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATAAAG-A-----------ATA--AG--A------A------------------AA-----------------CAT-CA--ATAA-T-GTTTTAG-C
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66022 59 -     89041 ATA-AACC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATAAAG-A-----------ATA--AG--A------A------------------AA-----------------CAT-CA--ATAA-T-GTTTTAG-C
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1155 50 -      5494 --------------------------TGAA--AAAT-TTC-CTT--CT-ATACAG-A-----------ATA--AT--A------A------------------AA-----------------CAT-GA--ATAA-C-ATGTTAA-C
i Cephalopachus_bancanus.k141_1689090                    I 3 C 0
s Ceratotherium_simum.JH767749.1                          15491102 60 -  27778364 ATT-AC-CC--------T--A-----TGGG--AAAT-CAC-CTT--CC-ATGCAG-C-----------GT----GAGA------A------------------AG-----------------TAC-CAA-GTAA-T-ATTCTAG-C
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17935 60 +     27315 ATT-AC-CC--------T--A-----TGGG--AAAT-CAC-CTT--CC-ATGCAG-C-----------GT----GAGA------A------------------AG-----------------TAC-CAA-GTAA-T-ATTCTAG-C
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139938 59 -   4669795 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATta-c-attttag-c
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43680 59 +     47900 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43507 59 -     44860 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43493 59 -    148725 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACGG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25710 59 -     40656 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5676 59 +     20796 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10753 59 -     17524 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAC-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26475 59 -     34525 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10296 59 -     25376 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362896 59 -  39242232 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268608 59 +  21565898 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        30942 59 -     45857 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25882 59 -     32606 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2040 59 +      8499 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24438 59 +     70610 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21367 59 +     36323 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11733 60 -     19938 ATT-AC-CC--------T--A-----TGAA--AAAT-CAC-CTG--CC-ATGTGG-C-----------ATG--AG--A------C------------------AT-----------------TCT-CAA-CTAA-C-ATTTTAG-A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29554 58 -     33796 ATA-AT-C---------T--A-----TTAA--AAAT-CTC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TGT-CA--ATAA-C-GTTTTAG-C
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4071 58 -     15404 ATA-AT-C---------T--A-----TTAA--AAAT-CTC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-CA--ATAA-C-ATTTTAG-C
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7929 59 -     32913 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------GTA--AG--A------A------------------GG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18342 59 -     40346 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------GG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18597 59 +    216457 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------GG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18390 59 +     39636 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------GG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237508 61 -   2543920 Att-gt-t--------ttatg-----aaga--aaat-ccC-CTT--CT-ACACA-GA-----------CTT--AG--A------A------------------AG-----------------ATT-CA--GTAA-C-ACTTTAG-T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           2979 59 +      5346 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-AAACAG-A-----------GTA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41474 59 -    112038 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--ATAA-C-GTTTTAG-C
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7045 59 +     34062 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--ATAA-C-GTTTTAG-C
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342258 59 +  18827391 ATA-ATGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8804 59 -     44032 ATA-ATGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303582 59 - 135778131 ATA-ATGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATaa-c-attttag-c
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13049 34 +     15858 ATT-AC-CC--------T--A-----TAAA--AAAT-CAA-CTT--CC-ATGTGG-T-----------AT----------------------------------------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 15
s Choloepus_hoffmanni.KN194906.1                            604625 34 -    839153 ATT-AC-CC--------T--A-----TAAA--AAAT-CAA-CTT--CC-ATGTGG-T-----------At----------------------------------------------------------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 15
s Colobus_angolensis.KN981557.1                             408020 59 -   2368649 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTaa-c-attttag-c
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377895 59 - 200372422 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CG-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1444 59 -     84244 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CG-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806160 60 +  53390261 ttt-ac-c---T-----T--A-----TAGA--AGAT-CAC-CTC--CC-ACACAG-C-----------AT-AA-G--A------A------------------AG-----------------TAT-CAA-ATAA-C-ACTCTAG-T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1740 45 -      8242 ----------------------------------AT-TAT-CTT--CC-ACAAAG-G-----------GT----GAGA------A------------------AG-----------------TAT-CAA-GTAA-C-ATTTTAG-C
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 12 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41179 36 -     83289 ----------------------------------------------CT-GTACAG-C-----------ATT--GT--A------A------------------AG-----------------CAT-CA--ATAA-C-ATCTTAG-A
i Cricetomys_gambianus.CriGam_scaffold_14425             I 19 C 0
s Cricetulus_griseus.LT883664.1                          213113638 36 - 224834208 ----------------------------------------------CT-GTACGA-C-----------ATT--AT--T------A------------------AG-----------------TGT-CA--ATAA-C-ATTTTAG-A
i Cricetulus_griseus.LT883664.1                          I 22 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6065 45 +     12657 ATT-AT-ACACTGTACAA--A-----TGGC--ATAG-TAC-ATG--CC-ACATAA-A-----------AC----C--A------A-------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 18
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3229 31 +     87169 ATT-AC-TC--------T--G-----TGGA--AAAT-CAC-CTT--TC-ACACTG-------------------------------------------------------------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 4 I 27
s Ctenodactylus_gundi.CteGun_scaffold_65                    643855 40 -   1526836 ATT-GC-C---T-----TGTG-----AA-A--TATA-CCC-CAT--CT-ACACAG-C-----------ATT--AG--A------A-------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 14
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16495 61 +     50838 AAT-GT-C---T-----TATG-----AAGA--AAAT-CCC-CTT--CC-ACACAG-A-----------CTT--AA--A------A------------------TG-----------------ACT-CT--GTAA-C-ATTTCAT-T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   2972 61 +     36344 ATT-GT-C---T-----TATG-----AAGA--AAAT-CCC-CTT--CT-ACACAG-C-----------CTT--AG--A------A------------------AG-----------------ATT-CA--GTAA-C-ACTTTAG-T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26727 61 +     75252 ATC-AT-CC--------TATG-----AAGA--AAAT-CCC-CTT--CT-ACACAG-C-----------CTT--AG--A------A------------------AG-----------------ATT-CA--GTTA-C-ATTTTAG-T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109076 61 -   2246927 ATT-AC-CC--------T--A-----TGAA--AAAT-CACCCTT--CT-GTGTGG-C-----------ATG--AG--A------C------------------GT-----------------GCT-CA-GTTAA-C-ATGTTAG-A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291506 58 +  12879189 ATA-AC-C---------T--A-----CGAA--AAAT-CAC-TTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AA-----------------TAT-CA--ATAA-C-ATTTTAG-C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624292 61 -  35494412 ATT-TT-CC--------T--A-----TGGA--AAAT-CAC-CTT--CC-ATACAG-T-----------GT----G--AA-G---A------------------TG--T--------------TAT-TAA-GTCA-T-AGTGAAA-C
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.PEHR01003915.1                             164 60 +       233 GTT-AC-CC--------T--G-----TGGA--GAAG-CCC-CTT--CT-GCGCAG-G-----------GT----GAGA------A------------------AG-----------------AAG-CAA-GGAA-C-ATTCTAG-C
i Desmodus_rotundus.PEHR01003915.1                       I 4 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663393 60 -   1390856 ATT-AC-CC--------T--A-----TGGG--AAAT-CAC-CTT--CC-ACGCAG-C-----------GT----GAGA------A------------------AG-----------------TAC-CAA-GTAA-T-GTTCTAG-C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138179 60 -    198055 ATT-AC-CC--------T--A-----TGGC--AAAT-CAC-CTT--CC-ATGCAG-C-----------GT----GAGA------A------------------AG-----------------TAC-CAA-GTAA-T-ATTCTAG-C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97543 32 -    115145 TTT-GT-T---T-----TCTG-----GAAA--AAAT-CCC-CTT--CT-ACACA--------------------------------------------------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 23
s Dipodomys_ordii.KN672350.1                              18949240 35 -  37912305 -----------------------------------------------T-AGACAA-T-----------GTT--AG--A------A------------------AA-----------------CAT-CA--ATAG-C-ATTTTAA-C
i Dipodomys_ordii.KN672350.1                             I 6 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4186 31 -     10735 ----------------------------------------------------CAA-T-----------GTT--AG--A------A------------------AA-----------------CAT-CA--ATAG-C-ATTTTAA-C
i Dipodomys_stephensi.DipSte_scaffold_89095              I 5 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  8997 61 +     14636 ATT-GT-C---T-----TATG-----AAGA--AAAT-CCC-CTG--CT-ACATAG-C-----------CTT--AG--A------A------------------AG-----------------ATT-CA--GTAA-C-ATTTTAG-T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853677 26 - 111700974 ATT-AC-AC--------T--A-----TGAA--AAAT-CAC-CTC---C-CC-----------------------------------------------------------------------------------------------
i Echinops_telfairi.JH980293.1                           C 0 I 28
s Eidolon_helvum.AWHC01266696.1                               5190 60 +     19438 att-ac-a--------at--a-----taga--atat-CAC-CTT--CC-ACACAG-C-----------AC----GAGA------A------------------AA-----------------TAT-CAA-GTAA-C-ATTCTAG-C
i Eidolon_helvum.AWHC01266696.1                          I 4 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238512 44 -    607251 ATA-AT-C---T-----T--A-----TGGA--AGAT-CAT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------A------------------------------------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 13
s Elephantulus_edwardii.JH947257.1                         9107476 26 -  10337057 ATT-AT-AC--------T--A-----TGAA--ACAT-CAC-CTC---A-AC-----------------------------------------------------------------------------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 28
s Ellobius_lutescens.LOEQ01008920.1                          29911 36 +    110024 ----------------------------------------------CT-GTACAA-T-----------GAT--AT--T------A------------------AG-----------------CAT-CA--ATAA-T-ACTTTTG-A
i Ellobius_lutescens.LOEQ01008920.1                      I 20 C 0
s Ellobius_talpinus.LOJH01026522.1                           11886 36 +     18970 ----------------------------------------------CT-GTACAA-T-----------GAT--AT--T------A------------------AG-----------------CAT-CA--ATAA-T-ACTTTAG-A
i Ellobius_talpinus.LOJH01026522.1                       I 20 C 0
s Enhydra_lutris.KZ291758.1                               24915064 26 +  41312741 --------------------------------------------------------------------------GAGA------A------------------AG-----------------CAT-CCA-GTGA-C-ATTCTAG-C
i Enhydra_lutris.KZ291758.1                              I 30 C 0
s Eptesicus_fuscus.JH977646.1                             12577762 60 +  14770903 ATT-AC-CC--------C--A-----TAGA--ATAT-TAC-CTT--CC-ACAGAG-C-----------AT----GAGA------A------------------AG-----------------TAT-CAA-GTAA-C-ATTCTAG-A
i Eptesicus_fuscus.JH977646.1                            I 4 C 0
s Equus_asinus.JREZ01000139.1                              3040041  9 -   4378816 ---------------------------------------------------------------------------------------------------------------------------------------C-ATTCTAG-C
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373965  9 +  39960074 ---------------------------------------------------------------------------------------------------------------------------------------C-ATTCTAG-C
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410751  9 -    498745 ---------------------------------------------------------------------------------------------------------------------------------------C-ATTCTAG-C
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3664400 56 +   7059049 ATT-AT-C-A-------T--A-----TGCA--TAAT-CAT-CAG--CT-ACAGGG-C-----------AT----A--A------G------------------AG-----------------AGT--AA-G-AA-T-ATTTTCA-C
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               261785 59 +  21539334 ATA-ATGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATATAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63842 61 -    133382 ATT-TT-CC--------T--A-----TGGA--AAAT-CAC-CTT--CC-ATACAG-C-----------GT----G--AA-G---A------------------AG--T--------------TAT-TAA-GTCA-T-AGTCAAA-C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4059 61 +      7672 ATT-TT-CC--------T--A-----TGGA--AAAT-CAC-CTT--CC-ATACAG-C-----------GT----A--AA-G---A------------------AG--T--------------TAT-TAA-GTCA-T-AGTCAAA-C
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13679 58 -     24895 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACATAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-AA--ATAA-C-ATTTTAG-C
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41388 58 -     70999 ATA-AC-C---------T--A-----TGAG--AAAT-CAC-CTT--CT-ACATAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-AA--ATAA-C-ATTTTAG-C
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85350 58 +    112731 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACATAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-AA--ATAA-C-ATTTTAG-C
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41919 58 +     68309 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACATAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-AA--ATAA-C-ATTTTAG-C
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52245 58 -     65740 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--GT-ACATAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-AA--ATAA-C-ATTTTAG-C
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22874 58 -     75513 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACATAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-AA--ATAA-C-ATTTTAG-C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47071 58 -     97555 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACATAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-AA--ATAA-C-ATTTTAG-C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3796 58 +     30972 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACATAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-AA--ATAA-C-ATTTTAG-C
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41516 58 -     52037 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACATAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-AA--ATAA-C-ATTTTAG-C
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57918 58 -    111500 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACATAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-AA--ATAA-C-ATTTTAG-C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245688 51 - 206538554 --------------------------TGGA--AAAT-GAC-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTAC-C-ATTCTAG-C
i Felis_catus.CM001381.2                                 I 11 C 0
s Felis_catus_fca126.CM031415.1                          185115473 51 - 205367284 --------------------------TGGA--AAAT-GAC-TTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTAC-C-ATTCTAG-C
i Felis_catus_fca126.CM031415.1                          I 11 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26571 51 -     30238 --------------------------TGGA--AAAT-GAC-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTAC-C-ATTCTAG-C
i Felis_nigripes.FelNig_flattened_line_31944             I 7 C 0
s Galago_moholi.ctg3793                                     123442 58 -    137831 CTA-AC-C---------C--A-----TGAA--AAAT-CAC-CTT--TT-CTGCAG-A-----------GTG--AG--A------A------------------AG-----------------TAT-CA--GTAA-T-Gttttag-c
i Galago_moholi.ctg3793                                  C 0 I 309
s Galago_senegalensis.k141_991736                             6987 58 +     22493 CTA-AC-C---------C--A-----TGAA--AAAT-CAC-CTT--TT-CTGCAG-A-----------GTG--AG--A------A------------------AG-----------------TAT-CA--GTAA-T-GTTTTAG-C
i Galago_senegalensis.k141_991736                        C 0 I 309
s Galagoides_demidoff.k141_561628                            19038 57 -     32986 CTA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT---T-CTGCAG-A-----------GTG--AG--A------A------------------AG-----------------TAT-CA--GTAA-T-GTTTTAG-C
i Galagoides_demidoff.k141_561628                        C 0 I 311
s Galeopterus_variegatus.GalVar_scaffold_74466               17999 59 +     18121 ATT-AC-C---T-----T--G-----TGAA--AAAT-CAC-CTT--CT-ACACAG-C-----------ACA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATGTTGG-C
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90191 64 -     95226 ATA-AT-C---T-----T--A-----TGGA--TGAT-CAT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-GAA-GTAA-T-AGTAAAA-C
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33118 41 -     36801 ATT-GT-CC--------TATT---TTAAAA--AACT-CAC-CTT--CT-ATACAG-C-----------ATT--TG-----------------------------------------------------------------------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 21
s Gorilla_beringei.k141_3358147                               4741 59 -      8343 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253753 59 - 186649187 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     615 41 -     78134 ATT-GC-TC--------TACT---TTAAAA--AGAT-CAC-CTT--CT-ATACAG-C-----------ATT--CA-----------------------------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 21
s Hapalemur_alaotrensis.k141_330369                          13604 58 -     40692 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-CA--ATAA-C-ATTTTAG-C
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35006 58 +     49394 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-CA--ATAA-C-ATTTTAG-C
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59874 58 -     66874 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-CA--ATAA-C-ATTTTAG-C
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8748 58 -     42923 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-CA--ATAA-C-ATTTTAG-C
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15748 58 -     53142 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-CA--ATAA-C-ATTTTAG-C
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29706 31 -    327341 ATT-AC-TC--------T--G-----TGGA--AAAT-TAC-CTT--TC-ACTCTG-------------------------------------------------------------------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            I 4 I 27
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  7945 64 +     48891 ATA-AT-C---T-----T--A-----TGGA--AGAT-CGT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-TAA-GTAA-T-AGTGAAA-C
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1926135 61 -  22651954 ATT-GT-C---T-----TATG-----AGGA--AAAT-CCC-CTT--CT-ACACAG-C-----------CTT--AG--A------C------------------AG-----------------ATT-CA--GTAA-C-ATTTTAG-T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                5891 51 +      6687 --------------------A-----TGAA--AGGT-CAC-CTT---C-ATATGG-T-----------GTA--AC--A------A------------------AG-----------------CAA-CA-GATAA-C-ATTCCAG-G
i Heterohyrax_brucei.HetBruBak_scaffold_128297           I 3 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6563 50 -     36432 --------------------A-----CAGA--AAAT-CAC-CTT--CT-ACACAG-T-----------GT----G--AA-G---A------------------A-------------------AT-AT-CGTCA-T-AGTCAAA-C
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 8 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49731 45 +     49977 ----------------------------------AT-GAT-CTT--TT-ACAAAG-T-----------GT----GAGA------A------------------AG-----------------TAT-CAA-GTAA-C-ATTTTAG-C
i Hipposideros_galeritus.HipGal_scaffold_23202           I 12 C 0
s Hoolock_leuconedys.ctg274                                    141761 59 -    630532 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-GTACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68625 60 +     83186 ATT-AT-CC--------T--A-----TGGA--AAGT-CAC-CTT--TC-ACATTG-T-----------AG----GAGA------A------------------AG-----------------CAG-CAA-GTAC-C-ATTCTTG-C
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 4 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70415 58 +    143317 ACT-GT-T---T-----TATG-----AAGA--AAAT-CCC-CTT--GA-A------T-----------CTTGAAG--A------A------------------AG-----------------ATT-CG--GTAG-C-ATTTTAG-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4796 59 +     12352 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-GTACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              11980 59 +     55766 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-GTACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051578 59 + 191637585 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-GTACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800456 59 +  11177569 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-GTACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3112 30 -    135385 -----------------------------------------------------AC-A-----------CTT--AG--A------A------------------AT-----------------CTT-CA--GTAA-T-ATTTTAC-T
i Hystrix_cristata.HysCri_scaffold_5660                  I 19 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385691 59 +   7955117 ACT-GT-CC--------TATG-----AT----AAAT-CAT-CTT--CT-ACACAG-T-----------Att--ca--a------a------------------aa-----------------tat-ca--ataa-c-attGTAG-C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1258 58 +     11955 ATG-AT-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATGA-C-GTTTTAG-C
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2079 61 -     16823 ATT-TT-CC--------T--A-----TGGA--AAAT-CAC-CTT--CC-ATACAG-C-----------GT----G--AA-G---A------------------TG--T--------------TAT-TAA-GTCA-T-AGTCAAA-C
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238458 21 +   9596543 ------------------------------------------------------------------------------------C------------------AT-----------------CAT-TA--ATAA-c-agtttag-a
i Jaculus_jaculus.JH725527.1                             I 14 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64558 61 -     97402 ATT-TT-CC--------T--A-----TGGA--AAAT-CAC-CTT--TC-ATACAG-C-----------GT----G--AA-G---A------------------TG--T--------------TAT-TAA-GTCA-T-AGTCAAA-C
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42201 59 +    110728 GTA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61625 60 -     65777 ATT-AT-CC--------C--A-----CCGA--CTAG-CAC-CTT--CC-ACAGAG-C-----------AT----GGGA------A------------------CG-----------------TAT-GAA-GTAA-C-ATTCTAG-A
i Lasiurus_borealis.LasBor_scaffold_16567                I 4 C 0
s Lemur_catta.scaffold_24                                 14758397 58 +  30322482 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-CA--ATAA-C-ATTTTAG-C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3117 59 -     13097 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-AAACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2871 59 +      5940 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-AAACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2701 59 -      5717 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-AAACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9066 59 -     11567 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-AAACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CC--ATAA-C-GTTTCAA-C
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10447 59 -     12945 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-AAACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CC--ATAA-C-GTTTCAA-C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7926 58 +     29618 ATA-AC-T---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-CA--ATAA-T-GTTTTAG-C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7922 58 +     31569 ATA-AC-T---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TGT-CA--ATAA-C-GTTTTAG-C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7932 58 +     24756 ATA-AC-T---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-CA--ATAA-C-ATTTTAG-C
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7932 58 +     16388 ATA-AC-T---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TGT-CA--ATAA-C-GTTTTAG-C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812462 42 -   3914936 --------------------------------------AT-CGT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTGA-C-ATTCTAG-C
i Leptonychotes_weddellii.KB714746.1                     I 16 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16776 56 +     24238 ATT-AC-TC--------T--G-------AA--AAAT-CAC-CC---CT-ACACAG-C-----------ATG--AG--A------A------------------AA-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333599 61 +    662738 ATT-TT-CC--------T--A-----TGGA--AAAT-CAC-CTT--CC-ATACAG-T-----------GT----G--AA-G---A------------------TG--T--------------TAT-TAA-GTCA-T-AGTCAAA-C
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               331891 59 -   1826925 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9199 58 +     19643 TTT-GC-C---------T--A-----TGAA--AAAT-CAC-ATT--CT-CTGCAG-A-----------GTG--AG--A------A------------------AG-----------------TAT-CA--ATAA-T-GCTTTAG-C
i Loris_lydekkerianus.k141_2031736                       C 0 I 310
s Loris_tardigradus.ctg83                                  5042860 58 -   6120653 TTT-GC-C---------T--A-----TGAA--AAAT-CAC-ATT--CT-CTGCAG-A-----------GTG--AG--A------A------------------AG-----------------TAT-CA--ATAA-T-GCTTTAG-C
i Loris_tardigradus.ctg83                                C 0 I 306
s Loxodonta_africana.GL010049.1                           39079953 51 +  43346337 --------------------A-----TGAA--AAAT-CAC-CTT---C-ACATGG-T-----------GTA--AG--A------C------------------AG-----------------CAC-GAA-ATAA-T-ATTCTAG-G
i Loxodonta_africana.GL010049.1                          I 3 C 0
s Lycaon_pictus.CM007581.1                                41613585 60 +  59628241 ATT-AC-CC--------T--A-----TGGA--AAGT-CAC-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTGA-T-ATTCTAA-C
i Lycaon_pictus.CM007581.1                               I 4 C 0
s Macaca_arctoides.k141_1757516                              44207 59 -     61512 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371869 59 -  60120075 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24132 59 +     30207 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21235 59 -     24934 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24085 59 +     30527 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35261 59 -     50087 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45005 59 +     51645 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414208 59 - 187317192 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATta-c-attttag-c
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398438 59 +  25927173 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATta-c-attttag-c
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47610 59 -     62418 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  148 59 +     14901 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44082 59 +     59329 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  269990 59 +    668171 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  266 59 +      1732 ATA-ACGC---------A--A-----TGAA--AAAC-CAC-TTT--CC-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1788 59 +     17132 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222155 59 -    270270 ATT-AC-G-A-------T--A-----TAGA--ATAT-CAC-CTT--CT-ACACAG-C-----------AT----GAAA------A------------------AA-----------------TAT-CAA-GTAA-C-AT-CTAG-C
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 4 C 0
s Mandrillus_leucophaeus.scaffold280                        321287 59 +  24302211 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356119 59 -    752769 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672475 59 -    737560 ATT-A--C-A-------T--A-----TAGA--AAAT-GGC-CTA--CC-ACATAG-T-----------GT----GAGA------A------------------ag-----------------tat-ca-agtaa-t-attctag-C
i Manis_javanica.JSZB01003497.1                          I 4 C 0
s Manis_pentadactyla.KN006162.1                             219762 59 +    317179 ATT-A--C-A-------T--A-----TAGA--AAAT-GGC-CTA--CC-ACATAG-T-----------GT----GAGA------A------------------ag-----------------tat-ca-agtaa-t-attctag-C
i Manis_pentadactyla.KN006162.1                          I 4 C 0
s Marmota_marmota.CZRN01000018.1                           7499912 59 +  40650429 ACT-GT-CC--------TATG-----AT----AAAT-CAT-CTT--CT-ACACAG-T-----------Gtt--ca--a------a------------------aa-----------------tat-ca--ataa-c-attGTAT-C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149330 45 +    207569 ----------------------------------AT-TAT-CTT--CC-ACAAAG-T-----------GT----GAGA------A------------------AA-----------------TAT-CAA-GTAA-C-ATTCTAG-C
i Megaderma_lyra.MegLyr_scaffold_4542                    I 12 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25168 26 -     74585 --------------------------------------------------------------------------GAGA------A------------------AG-----------------CAT-CCA-GTGA-C-ATTCTAG-C
i Mellivora_capensis.MelCap_flattened_line_19308         I 30 C 0
s Mesocricetus_auratus.KB708134.1                         17428182 36 +  29670104 ----------------------------------------------AT-GTATAG-C-----------ATT--AT--T------A------------------AG-----------------TGT-CA--ATAA-C-ATTTTAG-A
i Mesocricetus_auratus.KB708134.1                        I 20 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 48630  8 -    140813 ATT-TC-CC--------C--------------------------------------------------------------------------------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 668 I 261
s Mesoplodon_bidens.MesBid_scaffold_6114                     80143 61 +     93471 ATT-TT-CC--------T--A-----TGGA--AAAT-CAC-CTT--CC-ATACAG-C-----------GT----G--AA-G---A------------------TG--T--------------TAT-TAA-GTCA-T-AGTCAAA-C
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9240 59 +     17804 ATA-ACAC---------T--A-----CGAA--AAAT-CGT-TTT--TT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9742 59 -     12984 ATA-ACGC---------T--A-----CGAA--AAAT-CGT-TTT--TT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18056 59 -     26561 ATA-ACAC---------T--A-----CAAA--AAAT-CGT-TTT--TT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983536 58 +  93316391 ATA-AT-C---------T--A-----TCAA--AAAT-CAC-CTT--CT-ACATAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44748 20 +    145209 -------------------------------------------------------------------------------------------------------AG-----------------C-T-CAA-ATGA-C-ATTTTAG-G
i Microgale_talazaci.MicTal_scaffold_6613                I 33 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184109 28 +    200668 --------------------------------------------------------------------GT----GAGA------A------------------AG-----------------CAG-CGA-GTAA-C-ATTCCAG-C
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 35 C 0
s Microtus_ochrogaster.CM001695.1                         15961323 36 +  27267610 ----------------------------------------------CT-GTACAA-T-----------GTT--AT--T------A------------------AG-----------------CAT-Ca--ataa-t-attttag-a
i Microtus_ochrogaster.CM001695.1                        I 20 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362180 60 -   8254450 AAT-AC-CC--------G--A-----TAGA--ATAC-CAC-CTT--CC-ACAGAG-C-----------AT----GAGG------G------------------AG-----------------TAT-CAA-GTAA-C-ATTCTAG-C
i Miniopterus_natalensis.LDJU01000034.1                  I 4 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41081 60 -     48117 AAT-AC-CC--------G--A-----TAGA--ATAC-CAC-CTT--CC-ACAGAG-C-----------AT----GAGG------G------------------AG-----------------TAT-CAA-GTAA-C-ATTCTAG-C
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 4 C 0
s Miopithecus_ogouensis.k141_1534655                         21296 59 -     27822 ATA-ACAC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7470 42 +     27589 --------------------------------------AT-CGT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTGA-C-ATTCTAG-C
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 16 C 0
s Mirza_zaza.k141_766280                                     51325 58 -     62432 ATA-AT-C---------T--A-----TTAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-CA--ATAA-C-GTTTTAG-C
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352035 61 +    437263 ATT-TT-CC--------T--A-----TGGA--AAAT-CAC-CTT--CC-ATACAG-T-----------GT----G--AA-G---A------------------TG--T--------------TAT-TAA-GTCA-T-AGTGAAA-C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178240 60 +    366855 GTT-AC-CC--------T--A-----TAGA--ATAT-TAC-CCT--CT-GCACAG-G-----------GT----GAGA------A------------------AA-----------------CAT-CAA-GTTA-C-ATTCTAG-C
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23240 64 -     82753 ATA-AT-C---T-----T--A-----CGGA--AGAT-CAT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------GAA-GAA-GTAA-T-AGTAAAA-C
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17459 31 -     63510 ATT-AC-TC--------T--G-----TGGA--AAAT-CAC-CTT--TC-ACTCTG-------------------------------------------------------------------------------------------
i Mungos_mungo.MunMun_flattened_line_18455               I 4 I 27
s Murina_feae.MurFea_scaffold_17764                          38120 61 +     47283 ATT-AC-CC--------C--A-----CAGA--ATAT-CAC-CTT--CC-GCAGAG-C-----------AT----GAGA------A------------------AC-----------------TAT-CAA-GTAA-C-ATTCTATTA
i Murina_feae.MurFea_scaffold_17764                      I 4 C 0
s Mus_caroli.LT608237.1                                   35591857 36 + 120012414 ----------------------------------------------CT-GTACAG-T-----------TTT--CC--A------A------------------AG-----------------CAT-CT--AAAA-T-GTTTTCG-A
i Mus_caroli.LT608237.1                                  I 20 C 0
s Mus_musculus.chr8                                       41686216 36 + 129401213 ----------------------------------------------CT-GTACAG-C-----------TTT--CC--A------A------------------AG-----------------CAT-CT--AAAA-T-GGTTTCG-A
i Mus_musculus.chr8                                      I 20 C 0
s Mus_pahari.LT608297.1                                   58216102 36 +  89631738 ----------------------------------------------CT-GTACAG-C-----------TTT--AC--A------A------------------AG-----------------AAT-CT--AAAA-T-GTTTTAG-G
i Mus_pahari.LT608297.1                                  I 20 C 0
s Mus_spretus.CM004101.1                                  39495537 36 + 130317789 ----------------------------------------------CT-GTACAG-C-----------TTT--CC--A------A------------------AG-----------------CAT-CT--AAAA-T-GGTTTCA-A
i Mus_spretus.CM004101.1                                 I 20 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81698 41 -     86153 AGT-AC-CC--------TATT---TAAAAA--AAAT-AAC-CTT--CT-ATACAA-C-----------ATT--CA-----------------------------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 22
s Mustela_putorius.JH418006.1                             14354100 26 +  14710649 --------------------------------------------------------------------------GAGA------A------------------AG-----------------CAT-CCA-GTGA-C-ATTCTAG-C
i Mustela_putorius.JH418006.1                            I 30 C 0
s Myotis_brandtii.KE162005.1                               9792372 60 +  10118263 ATT-AC-CC--------C--A-----TAGA--TTAT-CAC-CTT--CC-GCAGAG-C-----------AT----GAGA------A------------------AG-----------------TAT-CAA-CTAA-C-ATTCTAG-A
i Myotis_brandtii.KE162005.1                             I 4 C 0
s Myotis_davidii.KB100139.1                                4386531 61 +   6019432 ATT-AC-CC--------C--A-----TAGA--ATAT-CAC-CTT--CC-GCAGAG-C-----------AT----GAGA------A------------------AG-----------------TAT-CAAACTAA-C-ATTCTAG-A
i Myotis_davidii.KB100139.1                              I 4 C 0
s Myotis_lucifugus.GL429869.1                               382351 60 +   4330536 ATT-AC-CC--------C--A-----TAGA--ATAT-CAC-CTT--CC-GCAGAG-C-----------AT----GAGA------A------------------AG-----------------TAT-CAA-CTAA-C-ATTCTAG-A
i Myotis_lucifugus.GL429869.1                            I 4 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1179 60 +     18357 ATT-AC-CC--------C--A-----TAGA--ATAT-CAC-CTT--CC-GCAGAG-C-----------AT----GAGA------A------------------AG-----------------TAT-CAA-CAAA-C-ATTCTAG-G
i Myotis_myotis.MyoMyo_scaffold_66571                    I 4 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118527 77 +    130748 ATC-AC-TC--------C--A-----TGAA--AAAT-CAC-TTT--CC-ATGTGG-G-----------ACG--AG--A------A------------------ATCATCAATTAACGTTTTTCAT-CAA-TTAA-C-ATTTTAC-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945004 36 +   3037898 ----------------------------------------------CT-ATACAG-C-----------ATT--TG--A------A------------------AG-----------------CAT-CA--AAAA-C-ATTTTAG-A
i Nannospalax_galili.KL204047.1                          I 20 C 0
s Nasalis_larvatus.k141_1350636                              27946 59 +     34575 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468065 42 -  31847680 --------------------------------------AT-CAT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTGA-C-ATTCTAG-C
i Neomonachus_schauinslandi.NINY01007730.1               I 16 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226204 61 -   7148211 ATT-TT-CC--------T--A-----TGGA--AAAT-CAC-CTT--CC-ATACAG-T-----------GT----G--AA-G---A------------------TG--T--------------TAT-TAA-GTCA-T-AGTGAAA-C
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   126950 54 -    149072 ----AC-CC--------T--A-----TAGA--ATAT-TAC-C-----T-GCACAG-G-----------GT----AAGA------A------------------AA-----------------TAT-CAA-GAAA-C-ATTCTAG-C
i Noctilio_leporinus.NocLep_scaffold_7894                I 3 C 0
s Nomascus_annamensis.k141_1771965                           52688 59 -    132029 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-GTACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8783 59 -     16345 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-GTACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14668 59 +     22201 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-GTACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412889 59 -  22158432 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-GTACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25066 59 -     54323 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-GTACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197178 60 +   9404916 ATT-AC-CC--------T--A-----TGGA--AAGT-CAC-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTGA-T-ATTCTAA-C
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 4 C 0
s Nycticebus_bengalensis.LG01                             93635195 58 + 196305487 CTT-GC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-CTGCAG-A-----------GTG--AG--A------A------------------AG-----------------TAT-CA--ATAA-T-GCTTTAG-C
i Nycticebus_bengalensis.LG01                            C 0 I 314
s Nycticebus_coucang.k141_3846325                             1953 58 -      3937 CTT-GC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-CTGCAG-A-----------GTG--AG--A------A------------------AG-----------------TAT-CA--ATAA-T-GCTTTAG-C
i Nycticebus_coucang.k141_3846325                        C 0 I 314
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563434 58 - 199412804 CTT-GC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-CTGCAG-A-----------GTG--AG--A------A------------------AG-----------------TAT-CA--ATAA-T-GCTTTAG-C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 314
s Ochotona_princeps.JH802162.1                             2550141 59 -   3988456 ATT-AC-TC--------T--G-----AGAA--AAAT-CAC-CCT--CT-ACACAG-C-----------ATG--AA--A------A------------------AA-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053164 66 -  11899542 ATT-Gt-c--------ttataattaaaaga--aaat-ccc-cTT--CT-ACACAG-A-----------CTT--GA--A------A------------------AG-----------------ACT-CA--GTAA-C-ATTTCAG-T
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450661 42 +   2017862 --------------------------------------AT-CGT--TC-ACATTG-T-----------GG----GAGA------A------------------AG-----------------TAT-CAA-GTGA-C-ATTCTAG-C
i Odobenus_rosmarus.KB229312.1                           I 16 C 0
s Odocoileus_virginianus.KZ100018.1                         435083 44 -    630418 GTA-AT-C---T-----T--A-----TGGA--AGAT-CAT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------A------------------------------------------
i Odocoileus_virginianus.KZ100018.1                      C 0 I 13
s Okapia_johnstoni.LVCL01S0005463.1                          13075 64 +    150152 ATA-AT-C---T-----T--A-----TGGA--TGAT-CAT-CTT--CC-ACGCAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-GAA-GTAA-T-AGTATAA-C
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91682 36 -    140218 ----------------------------------------------CT-GTACAA-T-----------GTT--AT--T------A------------------AG-----------------CAT-CA--ATAA-T-ATTTTAG-A
i Ondatra_zibethicus.OndZib_scaffold_7387                I 20 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2541 36 -     41509 ----------------------------------------------CT-GTACAG-C-----------ATT--AT--T------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAA-G
i Onychomys_torridus.OnyTor_scaffold_28377               I 20 C 0
s Orcinus_orca.KB316932.1                                  8095474 61 +  10937097 ATA-TT-CC--------T--A-----TGGA--AAAT-CAC-CTT--CC-ATACAG-T-----------GT----G--AA-G---A------------------TG--T--------------TAT-TAA-GTAA-T-AGTCAAA-C
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12567 76 -     14239 ATT-GC-A----G----T--A-----TGAA--AAAT-TAC-CTT---C-ACATGG-T-----------ATA--AA--A------ATTTCCTTCATCTGGCTTAAG-----------------C-T-CAA-ATAG-C-ATTTTAG-G
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102612 56 - 174332312 ATT-AC-TC--------T--G-------AA--AAAT-CAC-CC---CT-ACACAG-C-----------ATG--AG--A------A------------------AA-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38224 60 +    559221 ATT-AC-CC--------T--A-----TAGA--AAGT-CAC-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTGA-T-ATTCTAA-C
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 C 0
s Otolemur_crassicaudatus.k141_649260                        38595 58 -     51505 CTA-AC-C---------C--A-----TGAA--AAAT-CAC-CTT--TT-CTGCAG-A-----------GTG--AG--A------A------------------AG-----------------TAT-CA--GTAA-T-GTTTTAG-C
i Otolemur_crassicaudatus.k141_649260                    C 0 I 311
s Otolemur_garnettii.GL873799.1                             351598 58 +   1103335 CTA-AC-C---------C--A-----TGAA--AAAT-CAC-CTT--TT-CTGCAG-A-----------GTG--AG--A------A------------------AG-----------------TAT-CA--GTAA-T-ATTTtag-c
i Otolemur_garnettii.GL873799.1                          C 0 I 311
s Ovis_aries.CM001607.2                                   26403065 64 -  44047080 ATA-AT-C---T-----T--A-----TGGA--AGAT-CGT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-TAA-GTAA-T-AGTGAAA-C
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3584 64 +     17875 ATA-AT-C---T-----T--A-----TGGA--AGAT-CGT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-TAA-GTAA-T-AGTGAAA-C
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             11357 61 -     26668 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTC--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CATACA--ATAA-CAATTTTAG-C
i Pan_troglodytes.NBAG03003091.1                         I 6 I 13
s Panthera_onca.PanOnc_flattened_line_3271                   23396 51 -    230217 --------------------------TGGA--AAAT-GAC-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTAC-C-ATTCTGG-C
i Panthera_onca.PanOnc_flattened_line_3271               I 11 C 0
s Panthera_pardus.KV860321.1                              18460722 51 -  18783137 --------------------------TGGA--AAAT-GAC-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTAC-C-ATTCTGG-C
i Panthera_pardus.KV860321.1                             I 11 C 0
s Panthera_tigris.KE722367.1                               3971442 51 +   8748460 --------------------------TGGA--AAAT-GAC-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTAC-C-ATTCTAG-C
i Panthera_tigris.KE722367.1                             I 11 C 0
s Pantholops_hodgsonii.KE114653.1                          1614507 64 +   2937107 ATA-AT-C---T-----T--A-----TGGA--AGAT-CAT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-TAA-GTAA-T-AGTAAAA-C
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242120 59 - 183742232 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTa-c-attttag-c
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8582 59 +     21308 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291156 59 -  20919399 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21230 59 -     27687 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14376 59 +     16796 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATTA-C-ATTTTAG-C
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21187 59 -     23640 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATTA-C-ATTTTAG-C
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14028 61 +     78924 ATT-AC-TC--------T--G-----TGGA--AAAT-CAC-TTT-TTG-ACACTG-T-----------TG----GAGA------A------------------AG-----------------CAT-CAA-GTAC-C-ATTCTAG-C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Perodicticus_ibeanus.k141_1921260                          24875 58 +     31479 CTA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-CTGTAG-A-----------GTG--AG--A------a------------------ag-----------------taa-ta--ataa-t-gttttag-c
i Perodicticus_ibeanus.k141_1921260                      C 0 I 502
s Perodicticus_potto.k141_1854441                            17243 58 -     24908 CTA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-CTGTAG-A-----------GTG--AG--A------A------------------AG-----------------TAA-TA--ATAA-T-Gttttag-c
i Perodicticus_potto.k141_1854441                        C 0 I 503
s Perognathus_longimembris.PerPac_flattened_line_89005         604 35 +      9367 -----------------------------------------------T-ATACAG-T-----------GTT--AG--A------A------------------AA-----------------CAT-CA--ATAG-C-ATTTTAA-C
i Perognathus_longimembris.PerPac_flattened_line_89005   I 6 C 0
s Peromyscus_maniculatus.KI615324.1                         245762 36 +  18517816 ----------------------------------------------CT-GTACAG-C-----------ATT--AT--T------A------------------AG-----------------CAT-CA--ATAA-C-ACTTTAA-G
i Peromyscus_maniculatus.KI615324.1                      I 20 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     30984 61 -     56120 ATT-GT-C---T-----TAGG-----AAGA--AAAT-CCC-CTT--CA-ACACAA-C-----------CTT--GG--G------A------------------AG-----------------ATT-CA--GTAA-C-TACTTAG-T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11332 41 -     15039 ATT-TT-CC--------T--A-----TGGA--AAAT-CAC-CTT--CC-ATACAG-T-----------GT----G--AA-G---A------------------TG-----------------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 I 17
s Piliocolobus_badius.k141_2704958                            1395 59 +     55023 ATA-ACGC---------G--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                          945 59 -     89929 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1534 59 +     40849 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253198 59 +  14605196 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTaa-c-attttag-c
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2703 60 +     22231 GTT-AC-CC--------C--A-----TAGA--ATAT-CAC-CTT--CC-ACAGAG-C-----------AT----GAGA------A------------------CG-----------------TAT-CAA-GTAA-C-ATTCTAG-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 4 C 0
s Pithecia_albicans.k141_1239476                             63838 59 +    207309 ATA-ACAC---------T--A-----TGAA--AAAT-CGT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--ATAA-G-GTTTTAG-C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4931 59 -     25401 ATA-ACAC---------T--A-----TGAA--AAAT-CGT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--ATAA-G-GTTTTAG-C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30674 59 +     58159 ATA-ACAC---------T--A-----TGAA--AAAT-CGT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--ATAA-G-GTTTTAG-C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         30950 59 +     63561 ATA-ACAC---------T--A-----TGAA--AAAT-CGT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--ATAA-G-GTTTTAG-C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30710 59 +     51148 ATA-ACAC---------T--A-----TGAA--AAAT-CGT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--ATAA-G-GTTTTAG-C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555680 59 -   4542175 ATA-ACAC---------T--A-----TGAA--AAAT-CGT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--ATAA-G-GTTTTAG-C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30694 59 +     51125 ATA-ACAC---------T--A-----TGAA--AAAT-CGT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------AG-----------------TGT-CA--ATAA-G-GTTTTAG-C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3416 61 -      8168 ATT-TT-CC--------T--A-----TGGA--AAAT-CAC-CTT--CC-ATACAG-C-----------GT----G--AA-G---A------------------TG--T--------------TAT-GAA-GTCA-T-AGTCAAA-C
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7097 59 +     39866 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------GG-----------------CGT-CA--ACAA-T-GTTTTAG-T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2181 59 -      9282 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------GG-----------------CGT-CA--ACAA-T-GTTTTAG-T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41585 59 -     87950 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------GG-----------------CGT-CA--ACAA-T-GTTTTAG-T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     41979 59 -     88961 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------GG-----------------CGT-CA--ACAA-T-GTTTTAC-T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6677 59 -     39403 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------GG-----------------CGT-CA--ACAA-T-GTTTTAG-T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41628 59 +     87928 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------GG-----------------CGT-CA--ACAA-T-GTTTTAG-T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6674 59 -     60166 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------GG-----------------CGT-CA--ACAA-T-GTTTTAG-T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13611 59 -     67232 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------GG-----------------CGT-CA--ACAA-T-GTTTTAG-T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41527 59 -     90634 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------GG-----------------CGT-CA--ACAA-T-GTTTTAG-T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          42994 59 +     89403 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-GTACAG-A-----------ATA--AG--A------A------------------GG-----------------CGT-CA--ACAA-T-GTTTTAG-T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176906 59 - 189387572 ATA-ATGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATaa-c-attttag-c
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191723 59 -   9816681 ATA-ATGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-CA--ATAA-C-ATTTTAG-C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26529 59 +     69807 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43725 59 -     80239 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2277 51 +      3019 --------------------A-----TGAA--AGGT-CAC-CTT---C-ATATGG-T-----------GTA--AC--A------A------------------AG-----------------CAA-CA-GATAA-C-ATTCCAG-G
i Procavia_capensis.ProCapCap_scaffold_255930            I 3 C 0
s Prolemur_simus.MPIZ01000396.1                            1981552 58 +   4620579 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-CA--ATAA-C-ATTTTAG-C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565019 58 -   2598838 ATG-AT-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2655 58 -      7103 ATG-AT-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3252 58 -     11706 AGG-AT-C---------T--A-----TGAA--AACT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            6988 58 -     30655 AGG-AT-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33313 58 +     46564 AGG-AT-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93584 58 -     98465 ATG-AT-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7221 58 +     35169 ATG-AT-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36037  8 +     52041 ATT-TC-CC--------C--------------------------------------------------------------------------------------------------------------------------------
i Psammomys_obesus.NESX01036366.1                        I 476 I 261
s Pteronotus_parnellii.KE847780.1                            51123 60 -     66298 ATT-AT-CC--------T--A-----TAGA--ATGT-CAC-CCT--CT-GCACAG-G-----------GT----GGGA------A------------------AG-----------------CAT-CAA-GTAA-C-ATTCTAG-C
i Pteronotus_parnellii.KE847780.1                        I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3667 26 -     18639 --------------------------------------------------------------------------GAGA------A------------------AG-----------------CAT-CCA-GTGA-C-ATTCTAG-C
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 30 C 0
s Pteropus_alecto.KB030862.1                               5839840 60 -  28871421 ACT-AC-G-A-------T--A-----TAGA--ATAT-CAC-CTT--CC-ACACAG-C-----------AT----GAGA------A------------------AA-----------------TAT-CAA-GTAA-C-ATTCTAG-C
i Pteropus_alecto.KB030862.1                             I 4 C 0
s Pteropus_vampyrus.KN525825.1                             3536349 60 -   4952924 ACT-AC-G-A-------T--A-----TAGA--ATAT-CAC-CTT--CC-ACACAG-C-----------AT----GAGA------A------------------AA-----------------TAT-CAA-GTAA-C-ATTCTAG-C
i Pteropus_vampyrus.KN525825.1                           I 4 C 0
s Puma_concolor.QAVW01001104.1                            18098036 51 +  38429054 --------------------------TGGA--AAAT-GAC-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTAC-C-ATTCTAG-C
i Puma_concolor.QAVW01001104.1                           I 11 C 0
s Pygathrix_cinerea.k141_1153803                             25903 59 +     91421 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152397 57 -   7812017 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-------------------T-CA--GTAA-C-ATTTTAG-C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6770 59 +     72585 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52002 44 +     55069 GTA-AT-C---T-----T--A-----TGGA--AGAT-CAT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------A------------------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 13
s Rattus_norvegicus.chr16                                 37021460 36 -  90668790 ----------------------------------------------CT-GTACAG-C-----------TTT--AC--A------A------------------AA-----------------TAT-TG--ATAA-T-AGTTTAT-A
i Rattus_norvegicus.chr16                                I 20 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913749 45 +   3329780 ----------------------------------AT-CAT-GTT--CA-ACAGAG-T-----------GT----GAGA------A------------------AG-----------------TAT-CAA-GTAA-C-ATTCTAG-C
i Rhinolophus_sinicus.LVEH01000134.1                     I 12 C 0
s Rhinopithecus_bieti.k119_778604                              475 59 +      7119 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121083 59 + 195417433 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTaa-c-attttag-c
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235325 59 -   7961872 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73762 60 -    116970 ATT-AC-A-A-------T--A-----TAGA--ATAT-CAC-CTT--CC-ACACAG-C-----------AT----GAGA------A------------------AA-----------------TAT-CA-GATGA-C-ATTCTAG-C
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 4 C 0
s Saguinus_bicolor.k141_1429097                               2977 59 +     27962 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-AAACAG-A-----------GTA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2872 59 +      6077 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-AAACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             2963 59 +      5971 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-AAACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2885 59 +      5932 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-AAACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1227 59 -      4390 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-AAACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390662 59 - 209938924 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-AAACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2834 59 +      5979 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-AAACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3596 59 -      4301 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-AAACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6657 64 +     16473 ATA-AT-C---T-----T--A-----TGGA--AGAT-CAT-CTT--CC-ACACAG-T-----------GT----G--AATGAAGA------------------AG-----------------TAA-TAA-GTAA-T-AGTAAAA-C
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108003 59 + 121099817 ATA-ACAC---------t--a-----tgaa--aaat-cat-ttt--ct-atACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29564 59 -     47369 ATA-AAAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              29952 59 -     79414 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26643 59 -     34454 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14050 59 -     22428 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29196 59 -     47109 ATA-ACAC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATACAG-A-----------ATA--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-GTTTTAG-C
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237256 59 +   5703754 ATA-AACC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATAAAG-A-----------ATA--AG--A------A------------------AA-----------------CAT-CA--ATAA-T-GTTTTAG-C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6846 59 +     21866 ATA-AACC---------T--A-----TGAA--AAAT-CAT-TTT--CT-ATAAAG-A-----------ATA--AG--A------A------------------AA-----------------CAT-CA--ATAA-T-GTTTTAG-C
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    114951 60 +    313613 ATT-AC-C---T-----T--A-----AGGA--AAAT-CGT-CTC--CC-ATACAG-C-----------AT-AA-G--A------A------------------AG-----------------TAT-CAA-ATAA-C-ACTCTAA-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24222 59 +     27374 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27736 59 +     58920 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14232 59 -     45317 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21891 59 -     42441 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AT-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24569 59 -     29113 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27643 59 -     48123 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48172 36 +     77746 ----------------------------------------------CT-GTACAG-C-----------ATT--AT--T------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTCG-A
i Sigmodon_hispidus.SigHis_scaffold_20193                I 19 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857262 58 -   1910179 ATT-AC-CC--------T--A-----TGGA--AAAG-TAC-TGT--CT-ACACAG-A-----------AT----G--A------A------------------AG-----------------TAT-CAA-GTAA-C-ATTCCAG-C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4669911 46 +  18376816 ATT-CA-GAAATGTACAA--A-----CAAC--ATGGCTAT-AAG--CA-GCacca-g-----------gc----a--a------g-------------------------------------------------------------
i Sorex_araneus.JH798187.1                               C 0 I 15
s Spermophilus_dauricus.KZ294078.1                         1867270 59 +   3870691 ACT-GT-CC--------TGTG-----AT----AAAT-AAT-CTT--CT-ACAcag-t-----------att--aa--a------a------------------aa-----------------tat-ca--ataa-c-attGTAG-C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5640 42 -     97271 --------------------------------------AT-CTT--TC-ACACTG-G-----------GA----GAGA------A------------------AG-----------------CAT-CTA-GTGA-C-ATTCTAG-C
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 15 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123866 31 +    196729 ATT-AC-TC--------T--G-----TGGA--AAAT-CAC-CTT--TC-ACTCTG-------------------------------------------------------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 4 I 24
s Symphalangus_syndactylus.tarseq_199                       390150 59 +   1523678 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-GTACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--ATAA-C-ATTTTAG-C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13109 58 +     22964 ATT-AC-CC--------T--G-----TAG----TAT-CAC-CTT--CC-GCAGAG-T-----------GT----GAGA------A------------------AG-----------------TAT-CAA-GCTA-C-ATTCCAG-C
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 4 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1643 77 +      5583 ATC-AC-TC--------T--A-----TAAA--GAAT-CAC-CTT--CC-ATGTGG-G-----------ATG--AG--G------A------------------ATCATTAATTAACGTTTTTCAT-CAA-TTAA-C-ATTTTAC-A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190554 60 +    199430 ATT-AC-CC--------C--G-----TGGG--AAAT-CAC-CTT--CT-ACACGG-C-----------AT----GAGA------A------------------AG-----------------TAT-CAA-GTGA-T-ATTCTAG-C
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104506 60 -    539355 ATT-AC-CC--------C--G-----TGGG--AAAT-CAC-CTT--CT-ACACGG-C-----------AT----GAGA------A------------------AG-----------------TAT-CAA-GTGA-T-ATTCTAG-C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5847 55 +      6850 -----CTC---------T--A-----TGAA--AAAT-CTC-CTT--CT-ACACAG-A-----------ATA--AT--A------A------------------AA-----------------CAT-GA--ATAA-C-ATGTTAA-C
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5898 55 +     20590 -----CTC---------T--A-----TGAA--AAAT-CTC-CTT--CT-ACACAG-A-----------ATA--AT--A------A------------------AA-----------------CAT-GA--ATAA-C-ATGTTAA-C
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352106 59 - 186847797 ATA-ACGC---------T--A-----TGAA--AAAC-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CG--ATta-c-attttag-c
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23621 32 -     33621 ATT-GT-C---T-----TATG-----AATA--AATT-CCC-CTT--CA-ACACA--------------------------------------------------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 23
s Tolypeutes_matacus.TolMat_scaffold_31955                   18767 38 -     31044 ATT-AC-CC--------T--A-----TGAA--ACAT-CTC-CTG--CC-ATGTGG-C-----------ATG--AG--A--------------------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 20
s Tonatia_saurophila.TonSau_scaffold_294                    479151 60 -    610378 GTT-AC-CC--------T--G-----TGCA--GTAT-TCC-CTT--CT-ACACGG-G-----------GT----GAGA------A------------------AG-----------------CAG-CAA-GTCA-C-CTTCTGG-C
i Tonatia_saurophila.TonSau_scaffold_294                 I 4 C 0
s Trachypithecus_auratus.k141_1189070                        19768 59 +     26378 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32446 59 -     78344 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19093 59 +     25722 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27396 61 -     62838 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTTCGCT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27444 59 +     46913 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8253 59 -     28527 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29335 59 -     64340 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27372 59 -     63452 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8815 61 +     22490 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTTCGCT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2243 59 -      6147 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9148 59 -     13050 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254388 59 -   6242583 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         412 59 +     19340 ATA-ACGC---------T--A-----TGAA--AAAT-CAC-TTT--CT-ATACAG-A-----------ATG--AG--A------A------------------AG-----------------CAT-CA--GTAA-C-ATTTTAG-C
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172274 61 -    200418 ATT----T---T-----T--A-----TGGA--AAAT-CAC-CTT--CC-ACACAG-T-----------GT----G--AAGGAAGA------------------AG-----------------GAT-CAA-GCAG-T-AGTG-AA-C
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479412 52 -  10818551 --------------------A-----TGAAA-AAAT-CAC-CTT---C-GCATGG-C-----------GTA--AG--A------A------------------AG-----------------CAT-CAA-ATAA-C-ATCCTAG-G
i Trichechus_manatus.JH594705.1                          I 3 C 0
s Tupaia_chinensis.KB320699.1                              1832788 60 -   4065304 GCT-AC-CC--------T--A-----TGAA--ATAT-CAC-CTT--CT-ACACAA-C-----------TTG-GGG--A------A------------------AA-----------------CAT-CA--GTAA-C-GTTTgag-c
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7108 60 -     70247 GTT-AC-CC--------T--G-----TGAA--ATAT-CAC-CTT--CT-ACACAA-C-----------TTG-GGG--A------A------------------AA-----------------CAT-CA--ATAA-C-ATTTGAG-C
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360209 61 -  33153633 ATT-TT-CC--------T--A-----TGGA--AAAT-CAC-CTT--CC-ATACAG-T-----------GT----G--AA-G---A------------------TG--T--------------TAT-TAA-GTCA-T-AGTCAAA-C
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    1412 60 -     21056 GTT-AT-CC--------T--A-----TAGA--AAAT-CAG-CTC--AT-GCACAG-C-----------AT-AA-G--A------A------------------AG-----------------TAT-TA-CGTAA-T-GCTCTAA-T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180819 42 +   5085361 --------------------------------------AT-CTT--TC-ACACTG-T-----------GG----GAGA------A------------------AG-----------------CAT-CA-GGTGA-C-ATTTTAG-C
i Ursus_maritimus.KK499267.1                             I 16 C 0
s Varecia_rubra.k141_787544                                  24196 58 -     30710 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-CA--ATAA-C-ATTTTAG-C
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23103 58 -    147434 ATA-AC-C---------T--A-----TGAA--AAAT-CAC-CTT--CT-ACACAG-A-----------ATG--AG--A------A------------------AG-----------------TAT-CA--ATAA-C-ATTTTAG-C
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75285 60 +   5488506 ATT-AT-CC--------T--A-----TAGA--AAAT-CAT-CTT--CC-ACATAG-T-----------AT----G--AA-G---A------------------AG-----------------TGT-CAA-GTAA-C-ATTCAAG-C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                103946 60 -    112863 ATT-AC-CC--------T--A-----TGGA--AAGT-CAC-CTT--TC-ACACTA-T-----------GA----GAGA------A------------------AG-----------------CAT-CAA-GTGA-T-ATTTTAA-C
i Vulpes_lagopus.VulLag_flattened_line_12041             I 4 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173045 59 -    224448 GCT-GT-C---T-----TATG-----AG----AAAT-CAT-CTT--CT-ACACAG-T-----------ATT--CA--A------A------------------TA-----------------TAC-CA--ATAA-C-ATTGTAG-C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27859 41 -     86975 --------------------------------------AT-TGT--TC-ACA-TG-T-----------GG----GAGA------A------------------AG-----------------CAT-CAA-GTGA-C-ATTCTAG-C
i Zalophus_californianus.ZalCal_flattened_line_17732     I 16 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2339 21 +      2695 ------------------------------------------------------------------------------------A------------------AT-----------------CAT-CA--ATAA-C-AGTTTAG-A
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 15 C 0
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4498 4 +     36723 CTT-----T
s Acinonyx_jubatus.LLWD01001279.1                           811826 4 +   1699592 TTT-----A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     19273 9 +     63021 CTTTTTTTT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 636
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414355 4 +  29979442 TTT-----A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214665 4 +    347723 TTT-----A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16926 4 -     61208 TTT-----T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46814 4 +     53615 TTT-----T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42775 4 +     44087 TTT-----T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15400 4 -     21945 TTT-----T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17083 4 +     32033 TTT-----T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71254 4 -     84148 TTT-----T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43493 4 -     78289 TTT-----T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42932 4 +     55831 TTT-----T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41382 4 -     64179 TTT-----T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23021 4 -     24835 TTT-----T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40007 4 +     45454 TTT-----T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45653 4 +     70886 TTT-----T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7829 4 +     30854 TTT-----T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31965 4 +     42133 TTT-----T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584190 4 +   2318259 TCT-----A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176169 4 -    412891 CTT-----A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49289 4 -     68529 TCT-----A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     208 4 +     17741 TTT-----T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              833 4 -     15923 TTT-----T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1108 4 -     16391 TTT-----T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                668 4 -     17186 TTT-----T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14983 4 -     32367 TTT-----T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4448 4 -     15198 CTT-----A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273716 4 +  21539123 TTT-----T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9884 4 +     48076 TTT-----T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5021 4 -     28759 TTT-----T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32573 4 +     44353 TTT-----T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47944 4 -     71267 TTT-----T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22003 4 -     33135 TTT-----T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5193 4 +     11645 TAT-----T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5199 4 -     19611 TAT-----T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956024 4 -  23207421 TCT-----C
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3233 4 -      4711 TCT-----C
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85181 4 +    124022 TCT-----A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20718 4 +    288883 TCT-----A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355105 4 +  48749331 TCT-----A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753673 4 +   1948126 TCT-----A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543812 4 -  45695690 TCT-----A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528836 4 -   4408762 TCT-----A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6904 4 +     28062 TTT-----T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42198 4 -     91139 TTT-----T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19724 4 +     95584 TTT-----T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19637 4 +    119600 TTT-----T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9190 4 +     18648 TTT-----T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8729 4 -     13885 TTT-----T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             797 4 -      8861 TTA-----T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453190 4 + 189096842 TTT-----T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                712 4 +      8664 TTT-----T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630011 4 +  17673402 TTT-----A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664297 4 +   7040546 TTT-----A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207957 4 +   1652518 TTT-----A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504376 4 +  60362399 TTT-----A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8012 4 -     23171 TTT-----A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221355 4 +   9314153 TTT-----A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614490 4 +  59632846 TTT-----A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106071 4 -  63665305 TTT-----A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407902 4 -  46296322 TCT-----A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590175 4 +  44709034 TCT-----A
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_108409                   7015 4 +      8835 GTT-----C
i Capromys_pilorides.CapPil_scaffold_108409              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269276 4 +    496798 TTT-----A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                383 4 -      1021 CTT-----A
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78314 4 -    217609 TCT-----A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995089 4 +  23392119 GTT-----A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998531 4 +  23407841 GTT-----A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61632 4 -     66877 GTT-----A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4108 4 -     12580 TTT-----T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42166 4 +     53515 TTT-----T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370097 4 -  26074798 TTT-----T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6986 4 -     34880 TTT-----T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66081 4 -     89041 TTT-----T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1205 4 -      5494 TTT-----A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491162 4 -  27778364 CTT-----A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17995 4 +     27315 CTT-----A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                139997 4 -   4669795 ttt-----t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43739 4 +     47900 TTT-----T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43566 4 -     44860 TTT-----T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43552 4 -    148725 TTT-----T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25769 4 -     40656 TTT-----T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5735 4 +     20796 TTT-----T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10812 4 -     17524 TTT-----T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26534 4 -     34525 TTT-----T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10355 4 -     25376 TTT-----T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362955 4 -  39242232 TTT-----T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268667 4 +  21565898 TTT-----T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31001 4 -     45857 TTT-----T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25941 4 -     32606 TTT-----T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2099 4 +      8499 TTT-----T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24497 4 +     70610 TTT-----T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21426 4 +     36323 TTT-----T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11793 4 -     19938 TTT-----T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29612 3 -     33796 TTT------
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4129 3 -     15404 TTT------
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7988 4 -     32913 TTT-----T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18401 4 -     40346 TTT-----T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18656 4 +    216457 TTT-----T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18449 4 +     39636 TTT-----T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237569 4 -   2543920 GTT-----C
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3038 4 +      5346 TTT-----T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41533 4 -    112038 TTT-----T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7104 4 +     34062 TTT-----T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342317 4 +  18827391 TTT-----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8863 4 -     44032 TTT-----T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303641 4 - 135778131 ttt-----t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13098 4 +     15858 TTT-----T
i Choloepus_didactylus.ChoDid_scaffold_70559             I 15 C 0
s Choloepus_hoffmanni.KN194906.1                            604674 4 -    839153 ttt-----t
i Choloepus_hoffmanni.KN194906.1                         I 15 C 0
s Colobus_angolensis.KN981557.1                             408079 4 -   2368649 ttt-----t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377954 4 - 200372422 TTT-----T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1503 4 -     84244 TTT-----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806220 4 +  53390261 TTT-----A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1785 4 -      8242 TTG-----A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41215 4 -     83289 CCT-----T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113674 4 - 224834208 TTT-----T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6128 4 +     12657 TAC-----T
i Crocidura_indochinensis.CroInd_scaffold_77846          I 18 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3287 4 +     87169 TTT-----A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 27 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643909 4 -   1526836 GTT-----T
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 14 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16556 4 +     50838 GTT-----C
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3033 4 +     36344 GTT-----C
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26788 4 +     75252 GTT-----C
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109137 4 -   2246927 TTT-----T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291564 4 +  12879189 TTT-----T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624353 4 -  35494412 TCT-----C
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.PEHR01003915.1                             224 4 +       233 CTT-----A
i Desmodus_rotundus.PEHR01003915.1                       C 0 n 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663453 4 -   1390856 TTT-----A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138239 4 -    198055 CTT-----A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97598 4 -    115145 GTT-----C
i Dinomys_branickii.DinBra_scaffold_10381                I 23 C 0
s Dipodomys_ordii.KN672350.1                              18949275 4 -  37912305 TTT-----T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4217 4 -     10735 TTT-----T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9058 4 +     14636 GTT-----A
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853731 4 - 111700974 TTT-----T
i Echinops_telfairi.JH980293.1                           I 28 C 0
s Eidolon_helvum.AWHC01266696.1                               5250 4 +     19438 TTC-----A
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238569 4 -    607251 TCT-----A
i Elaphurus_davidianus.JRFZ01104969.1                    I 13 C 0
s Elephantulus_edwardii.JH947257.1                         9107530 4 -  10337057 TTC-----T
i Elephantulus_edwardii.JH947257.1                       I 28 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29947 4 +    110024 TTT-----T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           11922 4 +     18970 TTT-----T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915090 4 +  41312741 TTT-----A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577822 4 +  14770903 TTT-----A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040050 4 -   4378816 TTT-----A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373974 4 +  39960074 TTT-----A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410760 4 -    498745 TTT-----A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3664456 4 +   7059049 TTT-----T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               261844 4 +  21539334 TTT-----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63903 4 -    133382 TCT-----C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4120 4 +      7672 TCT-----C
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13737 4 -     24895 TTT-----T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41446 4 -     70999 TTT-----T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85408 4 +    112731 TTT-----T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41977 4 +     68309 TTT-----T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52303 4 -     65740 TTT-----T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22932 4 -     75513 TTT-----T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47129 4 -     97555 TTT-----T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3854 4 +     30972 TTT-----T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41574 4 -     52037 TTT-----T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57976 4 -    111500 TTT-----T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245739 4 - 206538554 TTT-----A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115524 4 - 205367284 TTT-----A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26622 4 -     30238 TTT-----A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123809 4 -    137831 ttt-----t
i Galago_moholi.ctg3793                                  I 309 C 0
s Galago_senegalensis.k141_991736                             7354 4 +     22493 TTT-----T
i Galago_senegalensis.k141_991736                        I 309 C 0
s Galagoides_demidoff.k141_561628                            19406 4 -     32986 TTT-----T
i Galagoides_demidoff.k141_561628                        I 311 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               18058 4 +     18121 TTT-----T
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90255 4 -     95226 TCT-----A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33180 4 -     36801 TTT-----T
i Glis_glis.GliGli_scaffold_33859                        I 21 C 0
s Gorilla_beringei.k141_3358147                               4800 4 -      8343 CTT-----T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253812 4 - 186649187 CTT-----T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     677 4 -     78134 TTT-----T
i Graphiurus_murinus.GraMur_scaffold_10447               I 21 C 0
s Hapalemur_alaotrensis.k141_330369                          13662 4 -     40692 TTT-----T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35064 4 +     49394 TTT-----T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59932 4 -     66874 TTT-----T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8806 4 -     42923 TTT-----T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15806 4 -     53142 TTT-----T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29764 4 -    327341 TTT-----A
i Helogale_parvula.HelPar_flattened_line_2585            I 27 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8009 4 +     48891 TCT-----A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1926196 3 -  22651954 GTT------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                5942 4 +      6687 TTT-----T
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6613 4 -     36432 TCT-----A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49776 4 +     49977 TTT-----A
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141820 4 -    630532 TTT-----T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68685 4 +     83186 TTT-----A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70473 4 +    143317 GTT-----A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4855 4 +     12352 TTT-----T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12039 4 +     55766 TTT-----T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051637 4 + 191637585 TTT-----T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800515 4 +  11177569 TTT-----T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3142 4 -    135385 GTT-----A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385750 4 +   7955117 TTT-----T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1316 4 +     11955 TTT-----T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2140 4 -     16823 TCT-----C
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238479 4 +   9596543 ttt-----t
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64619 4 -     97402 TCT-----C
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42260 4 +    110728 TTT-----T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61685 4 -     65777 TGT-----A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758455 4 +  30322482 TTT-----T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3176 4 -     13097 TTT-----T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2930 4 +      5940 TTT-----T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2760 4 -      5717 TTT-----T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9125 4 -     11567 TTT-----C
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10506 4 -     12945 TTT-----C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7984 4 +     29618 TTT-----T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7980 4 +     31569 TTT-----T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7990 4 +     24756 TTT-----T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7990 4 +     16388 TTT-----T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812504 4 -   3914936 TTT-----A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16832 4 +     24238 TTT-----T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333660 4 +    662738 TCT-----C
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               331950 4 -   1826925 TTT-----T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9567 4 +     19643 TTT-----T
i Loris_lydekkerianus.k141_2031736                       I 310 C 0
s Loris_tardigradus.ctg83                                  5043224 4 -   6120653 TTT-----T
i Loris_tardigradus.ctg83                                I 306 C 0
s Loxodonta_africana.GL010049.1                           39080004 4 +  43346337 TTT-----T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613645 4 +  59628241 TTT-----A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44266 4 -     61512 TTT-----T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371928 4 -  60120075 TTT-----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24191 4 +     30207 TTT-----T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21294 4 -     24934 TTT-----T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24144 4 +     30527 TTT-----T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35320 4 -     50087 TTT-----T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45064 4 +     51645 TTT-----T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414267 4 - 187317192 ttt-----t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398497 4 +  25927173 ttt-----t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47669 4 -     62418 TTT-----T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  207 4 +     14901 TTT-----T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44141 4 +     59329 TTT-----T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270049 4 +    668171 TTT-----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  325 4 +      1732 TTT-----T
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1847 4 +     17132 TTT-----T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222214 4 -    270270 TTC-----A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321346 4 +  24302211 TTT-----T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356178 4 -    752769 TTT-----T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672534 4 -    737560 TTT-----A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219821 4 +    317179 TTT-----A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499971 4 +  40650429 ATT-----T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149375 4 +    207569 TTT-----A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25194 4 -     74585 TTT-----A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428219 2 +  29670104 --T-----T
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80204 4 +     93471 TCT-----T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9299 4 +     17804 TTT-----T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9801 4 -     12984 TTT-----T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18115 4 -     26561 TTT-----T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983594 3 +  93316391 TTT------
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44768 4 +    145209 TTT-----T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184137 4 +    200668 CTT-----A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961359 4 +  27267610 ttt-----t
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362240 4 -   8254450 TTT-----A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41141 4 -     48117 TTT-----A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21355 4 -     27822 TTT-----T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7512 4 +     27589 TTT-----A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51383 3 -     62432 TTT------
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352096 4 +    437263 TCT-----C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178300 4 +    366855 TTT-----T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23304 4 -     82753 TCT-----A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17517 4 -     63510 TTT-----A
i Mungos_mungo.MunMun_flattened_line_18455               I 27 C 0
s Murina_feae.MurFea_scaffold_17764                          38181 4 +     47283 CTT-----A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35591893 4 + 120012414 TTT-----T
i Mus_caroli.LT608237.1                                  C 0 I 228
s Mus_musculus.chr8                                       41686252 4 + 129401213 TTT-----T
i Mus_musculus.chr8                                      C 0 I 241
s Mus_pahari.LT608297.1                                   58216138 4 +  89631738 TTT-----T
i Mus_pahari.LT608297.1                                  C 0 I 213
s Mus_spretus.CM004101.1                                  39495573 4 + 130317789 TTT-----T
i Mus_spretus.CM004101.1                                 C 0 I 228
s Muscardinus_avellanarius.MusAve_scaffold_12866             81761 2 -     86153 --T-----T
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 22 C 0
s Mustela_putorius.JH418006.1                             14354126 4 +  14710649 TTT-----A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792432 4 +  10118263 TTt-----a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386592 4 +   6019432 TTt-----a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382411 4 +   4330536 TTt-----a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1239 4 +     18357 TTT-----A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118604 4 +    130748 TTT-----C
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945040 4 +   3037898 TTT-----T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28005 4 +     34575 TTT-----T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468107 4 -  31847680 TTT-----A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226265 4 -   7148211 TCT-----C
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127004 4 -    149072 TTC-----A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52747 4 -    132029 TTT-----T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8842 4 -     16345 TTT-----T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14727 4 +     22201 TTT-----T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412948 4 -  22158432 TTT-----T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25125 4 -     54323 TTT-----T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197238 4 +   9404916 TTT-----A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635567 4 + 196305487 ttT-----T
i Nycticebus_bengalensis.LG01                            I 314 C 0
s Nycticebus_coucang.k141_3846325                             2325 4 -      3937 ttt-----t
i Nycticebus_coucang.k141_3846325                        I 314 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563806 4 - 199412804 TTT-----T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 314 C 0
s Ochotona_princeps.JH802162.1                             2550200 4 -   3988456 ATT-----T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053230 4 -  11899542 GTT-----C
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450703 4 +   2017862 TTT-----A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435140 4 -    630418 TCT-----A
i Odocoileus_virginianus.KZ100018.1                      I 13 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13139 4 +    150152 TCT-----A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91718 4 -    140218 TTT-----T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2577 4 -     41509 TTT-----T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095535 4 +  10937097 TCT-----C
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12643 4 -     14239 TTT-----T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102668 4 - 174332312 TTT-----T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38284 4 +    559221 TTT-----A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38964 4 -     51505 TTT-----T
i Otolemur_crassicaudatus.k141_649260                    I 311 C 0
s Otolemur_garnettii.GL873799.1                             351967 4 +   1103335 ttt-----t
i Otolemur_garnettii.GL873799.1                          I 311 C 0
s Ovis_aries.CM001607.2                                   26403129 4 -  44047080 TCT-----A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3648 4 +     17875 TCT-----A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471841 4 - 189151597 CTT-----T
i Pan_troglodytes.CM009242.2                             I 59 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23447 4 -    230217 TTT-----A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460773 4 -  18783137 TTT-----A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971493 4 +   8748460 TTT-----A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614571 4 +   2937107 TCT-----A
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242179 4 - 183742232 ttt-----t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8641 4 +     21308 TTT-----T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291215 4 -  20919399 TTT-----T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21289 4 -     27687 TTT-----T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14435 4 +     16796 TTT-----T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21246 4 -     23640 TTT-----T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14089 4 +     78924 TTT-----A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         639 4 +      9367 TTT-----T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245798 4 +  18517816 TTT-----T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31045 3 -     56120 GTT------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11390 4 -     15039 TCT-----C
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 17 C 0
s Piliocolobus_badius.k141_2704958                            1454 4 +     55023 TTT-----T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1004 4 -     89929 TTT-----T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1593 4 +     40849 TTT-----T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253257 4 +  14605196 ttt-----t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2763 4 +     22231 TTT-----A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63897 4 +    207309 TTT-----T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4990 4 -     25401 TTT-----T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30733 4 +     58159 TTT-----T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31009 4 +     63561 TTT-----T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30769 4 +     51148 TTT-----T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555739 4 -   4542175 TTT-----T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30753 4 +     51125 TTT-----T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3477 4 -      8168 TCT-----C
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7156 4 +     39866 TTT-----T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2240 4 -      9282 TTT-----C
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41644 4 -     87950 TTT-----T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42038 4 -     88961 TTT-----T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6736 4 -     39403 TTT-----T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41687 4 +     87928 TTT-----T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6733 4 -     60166 TTT-----T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13670 4 -     67232 TTT-----T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41586 4 -     90634 TTT-----C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43053 4 +     89403 TTT-----T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176965 4 - 189387572 ttt-----t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191782 4 -   9816681 TTT-----T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26588 4 +     69807 TTT-----T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43784 4 -     80239 TTT-----T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2328 4 +      3019 TTT-----T
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981610 4 +   4620579 TTT-----T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565077 4 -   2598838 TTT-----T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2713 4 -      7103 TTT-----T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3310 4 -     11706 TTT-----T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7046 4 -     30655 TTT-----T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33371 4 +     46564 TTT-----T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93642 4 -     98465 TTT-----T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7279 4 +     35169 TTT-----T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51183 4 -     66298 TTT-----A
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3693 4 -     18639 TTT-----A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839900 4 -  28871421 TTC-----A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536409 4 -   4952924 TTC-----A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098087 4 +  38429054 TTT-----A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25962 4 +     91421 TTT-----T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152454 4 -   7812017 TTT-----T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6829 4 +     72585 TTT-----T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52059 4 +     55069 TCT-----A
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 13 C 0
s Rattus_norvegicus.chr16                                 37021496 4 -  90668790 TTT-----T
i Rattus_norvegicus.chr16                                C 0 I 203
s Rhinolophus_sinicus.LVEH01000134.1                       2913794 4 +   3329780 TTT-----A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              534 4 +      7119 TTT-----T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121142 4 + 195417433 ttt-----t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235384 4 -   7961872 TTT-----T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73822 4 -    116970 TTT-----A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3036 4 +     27962 TTT-----T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2931 4 +      6077 TTT-----T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3022 4 +      5971 TTT-----T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2944 4 +      5932 TTT-----T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1286 4 -      4390 TTT-----T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390721 4 - 209938924 TTT-----T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2893 4 +      5979 TTT-----T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3655 4 -      4301 TTT-----T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6721 4 +     16473 TCT-----A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108062 4 + 121099817 TTT-----T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29623 4 -     47369 TTT-----T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30011 4 -     79414 TTT-----T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26702 4 -     34454 TTT-----T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14109 4 -     22428 TTT-----T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29255 4 -     47109 TTT-----T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237315 4 +   5703754 TTT-----T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6905 4 +     21866 TTT-----T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115011 4 +    313613 TTT-----A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24281 4 +     27374 TTT-----T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27795 4 +     58920 TTT-----T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14291 4 -     45317 TTT-----T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21950 4 -     42441 TTT-----T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24628 4 -     29113 TTT-----T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27702 4 -     48123 TTT-----T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48208 4 +     77746 TTT-----T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857320 4 -   1910179 TTT-----T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4669972 4 +  18376816 tac-----t
i Sorex_araneus.JH798187.1                               I 15 C 0
s Spermophilus_dauricus.KZ294078.1                         1867329 4 +   3870691 TTT-----T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5682 4 -     97271 TTT-----A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123921 4 +    196729 TTT-----A
i Suricata_suricatta.SurSur_flattened_line_6629          I 24 C 0
s Symphalangus_syndactylus.tarseq_199                       390209 4 +   1523678 TTT-----T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13167 4 +     22964 TTT-----A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1720 4 +      5583 TTT-----C
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190614 4 +    199430 TTT-----C
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104566 4 -    539355 TTT-----A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5902 4 +      6850 TTT-----G
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5953 4 +     20590 TTT-----G
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352165 4 - 186847797 ttt-----t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23676 3 -     33621 GTT------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 23 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18825 4 -     31044 TTT-----T
i Tolypeutes_matacus.TolMat_scaffold_31955               I 20 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479211 4 -    610378 CTT-----A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19827 4 +     26378 TTT-----T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32505 4 -     78344 TTT-----T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19152 4 +     25722 TTT-----T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27457 4 -     62838 TTT-----T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27503 4 +     46913 TTT-----T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8312 4 -     28527 TTT-----T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29394 4 -     64340 TTT-----T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27431 4 -     63452 TTT-----T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8876 4 +     22490 TTT-----T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2302 4 -      6147 TTT-----T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9207 4 -     13050 TTT-----T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254447 4 -   6242583 TTT-----T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         471 4 +     19340 TTT-----T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172335 4 -    200418 TCT-----A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479464 4 -  10818551 TTT-----T
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832848 4 -   4065304 ttt-----t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7168 4 -     70247 TTT-----T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360270 4 -  33153633 TCT-----C
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    1472 4 -     21056 TCT-----A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180861 4 +   5085361 TTT-----A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24254 4 -     30710 TTT-----T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23161 4 -    147434 TTT-----T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75345 4 +   5488506 TTT-----A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104006 4 -    112863 TTT-----A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173104 4 -    224448 TTT-----T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27900 4 -     86975 TTT-----A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2360 4 +      2695 TTT-----T
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 C 0
e Perodicticus_potto.k141_1854441                            17301 503 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          24933 502 +     31479 I
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Psammomys_obesus.NESX01036366.1                            36045 261 +     52041 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 48638 261 -    140813 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4502  8 +     36723 A-TTTT---G-CT
s Acinonyx_jubatus.LLWD01001279.1                           811830  8 +   1699592 A-CTTT---A-CT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414359  8 +  29979442 G-CTTT---A-CG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214669  8 +    347723 G-CTTT---a-tg
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16930  6 -     61208 G-TTTT---A---
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   46818  8 +     53615 G-TTTT---A-CT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42779  8 +     44087 G-TTTT---A-CT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15404  8 -     21945 G-TTTT---A-CT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17087  8 +     32033 G-TTTT---A-CT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71258  8 -     84148 G-CTTT---A-CT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43497  8 -     78289 G-CTTT---A-CT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42936  8 +     55831 G-CTTT---A-CT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41386  8 -     64179 G-CTTT---A-CT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23025  8 -     24835 G-CTTT---A-CT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40011  8 +     45454 G-CTTT---A-CT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45657  8 +     70886 G-CTTT---A-CT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7833  8 +     30854 G-CTTT---A-CT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31969  8 +     42133 G-CTTT---A-CT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584194  8 +   2318259 G-TTTC---T-GT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176173  8 -    412891 G-CTTT---C-CT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49293  8 -     68529 G-TTTC---C-GT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     212  8 +     17741 G-CTTT---A-CT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              837  8 -     15923 G-CTTT---A-CT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1112  8 -     16391 G-CTTT---A-CT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                672  8 -     17186 G-CTTT---A-CT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14987  8 -     32367 G-GTTT---G-CT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4452  8 -     15198 G-CTTT---T-CT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273720  8 +  21539123 G-CTTT---A-CT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9888  8 +     48076 G-CTTT---A-CT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5025  8 -     28759 G-CTTT---A-CT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32577  8 +     44353 G-CTTT---A-CT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47948  8 -     71267 G-CTTT---A-CT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22007  8 -     33135 G-CTTT---A-CT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5197  7 +     11645 G-C-TT---T-AT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5203  7 -     19611 G-C-TT---T-AT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956028  8 -  23207421 G-TTTT---C-CT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3237  8 -      4711 G-TTTT---C-CT
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85185  8 +    124022 G-TTTC---T-GG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20722  8 +    288883 G-TTTC---T-GT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355109  8 +  48749331 G-TTTC---T-GT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753677  8 +   1948126 G-TTTC---T-GT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543816  8 -  45695690 G-TTTC---T-GT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528840  8 -   4408762 G-TTTC---T-GT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6908  4 +     28062 G-CTT--------
i Cacajao_ayresi.k141_96119                              C 0 I 2
s Cacajao_calvus.k141_89051                                  42202  4 -     91139 G-CTT--------
i Cacajao_calvus.k141_89051                              C 0 I 2
s Cacajao_hosomi.k141_81245                                  19728  4 +     95584 G-CTT--------
i Cacajao_hosomi.k141_81245                              C 0 I 2
s Cacajao_melanocephalus.k141_619699                         19641  4 +    119600 G-CTT--------
i Cacajao_melanocephalus.k141_619699                     C 0 I 2
s Callibella_humilis.k141_1233062                             9194  8 +     18648 G-CTTT---A-CT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8733  8 -     13885 G-CTTT---A-CT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             801  8 -      8861 G-CTTT---A-CT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453194  8 + 189096842 G-CTTT---A-CT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                716  8 +      8664 G-CTTT---A-CT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630015  8 +  17673402 G-TTTT---C-CT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664301  8 +   7040546 G-TTTT---C-CT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207961  8 +   1652518 G-TTTT---C-CT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504380  8 +  60362399 G-CTTT---A-CA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8016  8 -     23171 G-CTTT---A-CA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221359  8 +   9314153 G-CTTT---A-CA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614494  8 +  59632846 G-CTTT---A-CA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106075  8 -  63665305 G-CTTT---A-CA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407906  8 -  46296322 G-TTTC---T-GC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590179  8 +  44709034 G-TTTC---T-GC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_108409                   7019  8 +      8835 A-TTTC---A-CT
i Capromys_pilorides.CapPil_scaffold_108409              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269280  8 +    496798 A-CCTT---A-CT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                387  8 -      1021 G-CTTT---T-CT
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78318  8 -    217609 G-TTTT---C-TT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995093  8 +  23392119 A-CTTC---A-CT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998535  8 +  23407841 A-CTTC---A-CT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61636  8 -     66877 A-CTTC---A-CT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4112  8 -     12580 G-CTTT---A-CT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42170  8 +     53515 G-CTTT---A-CT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370101  8 -  26074798 G-CTTT---A-CT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6990  8 -     34880 G-CTTT---A-CT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66085  8 -     89041 G-CTTT---A-CT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1209  8 -      5494 A-CCTT---A-CT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491166  8 -  27778364 G-CTTT---C-CT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          17999  8 +     27315 G-CTTT---C-CT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140001  8 -   4669795 g-tttt---a-ct
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43743  8 +     47900 G-TTTT---A-CT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43570  8 -     44860 G-TTTT---A-CT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43556  8 -    148725 G-TTTT---A-CT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25773  8 -     40656 G-TTTT---A-CT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5739  8 +     20796 G-TTTT---A-CT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10816  8 -     17524 G-TTTT---A-CT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26538  8 -     34525 G-TTTT---A-CT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10359  8 -     25376 G-TTTT---A-CT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362959  8 -  39242232 G-TTTT---A-CT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268671  8 +  21565898 G-TTTT---A-CT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31005  8 -     45857 G-TTTT---A-CT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25945  7 -     32606 --TTTT---A-CT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2103  8 +      8499 G-TTTT---A-CT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24501  8 +     70610 G-TTTT---A-CT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21430  8 +     36323 G-TTTT---A-CT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11797  8 -     19938 G-CTTT---C-CT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29615  7 -     33796 G-C-TT---T-AT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4132  7 -     15404 G-C-TT---T-AT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             7992  8 -     32913 G-CTTT---A-CT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18405  8 -     40346 G-CTTT---A-CT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18660  8 +    216457 G-CTTT---A-CT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18453  8 +     39636 G-CTTT---A-CT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237573  8 -   2543920 A-CTTC---A-CT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3042  8 +      5346 G-CTTT---A-CT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41537  8 -    112038 G-CTTT---A-CT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7108  8 +     34062 G-CTTT---A-CT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342321  8 +  18827391 G-TTTT---A-CT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8867  8 -     44032 G-TTTT---A-CT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303645  8 - 135778131 g-tttt---a-ct
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13102  8 +     15858 G-CTTT---A-CT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 663
s Choloepus_hoffmanni.KN194906.1                            604678  8 -    839153 g-attt---a-ct
i Choloepus_hoffmanni.KN194906.1                         C 0 I 663
s Colobus_angolensis.KN981557.1                             408083  8 -   2368649 g-tttt---a-ct
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377958  8 - 200372422 G-TTTT---A-CT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1507  8 -     84244 G-TTTT---A-CT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806224 12 +  53390261 GGTTTA-CGATTT
i Condylura_cristata.JH655891.1                          C 0 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1789  8 -      8242 A-CTTT---C-CC
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41219  6 -     83289 G-CACT---A---
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 1
s Cricetulus_griseus.LT883664.1                          213113678  6 - 224834208 G-CTCA---A---
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_77846               6132  5 +     12657 G-TTCA-------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 25
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3291  8 +     87169 G-CTTT---A-CT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    643913  8 -   1526836 G-CCTC---A-CT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16560  8 +     50838 A-CTTC---A-CT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3037  8 +     36344 A-CTTC---A-CT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            26792  8 +     75252 A-CTTC---A-CA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109141  8 -   2246927 G-CTTT---C-CT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291568  7 +  12879189 G-C-TT---T-AT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624357  8 -  35494412 A-TTTT---C-CT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864199  7 -  20541912 G-CTT----T-CT
i Desmodus_rotundus.KZ672289.1                           I 624 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663457  8 -   1390856 G-CTTT---C-CT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138243  8 -    198055 G-CTTT---C-CT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97602  6 -    115145 G-CTTC---A---
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949279  8 -  37912305 G-TCCT---A-TT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4221  8 -     10735 G-TCCT---A-TT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9062  8 +     14636 A-CTTC---A-CT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853735  8 - 111700974 G-CTTT---A-CT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5254  8 +     19438 G-CTTT---c-cc
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238573  8 -    607251 G-TTTC---C-GT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107534  8 -  10337057 G-CTTT---G-CT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29951  6 +    110024 G-CTCT---A---
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01026522.1                           11926  6 +     18970 G-TTCT---A---
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               24915094  8 +  41312741 G-TTTT---A-TG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577826  8 +  14770903 G-CTTT---t-ct
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040054  8 -   4378816 G-TTTT---c-ct
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373978  8 +  39960074 G-TTTT---c-ct
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410764  8 -    498745 G-TTTT---c-ct
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3664460 11 +   7059049 GCTTTC-TTG-CT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               261848  8 +  21539334 G-TTTT---A-CT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63907  8 -    133382 A-TTTT---C-CT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4124  8 +      7672 G-TTTT---C-CT
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13741  7 -     24895 G-C-TT---T-AC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41450  7 -     70999 G-C-TT---T-AC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85412  7 +    112731 G-C-TT---T-AC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41981  7 +     68309 G-C-TT---T-AC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52307  7 -     65740 G-C-TT---T-AC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22936  7 -     75513 G-C-TT---T-AC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47133  7 -     97555 G-C-TT---T-AC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3858  7 +     30972 G-C-TT---T-AC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41578  7 -     52037 G-C-TT---T-AC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57980  7 -    111500 G-C-TT---T-AC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245743  8 - 206538554 A-CTTT---A-CT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115528  8 - 205367284 A-CTTT---A-CT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26626  8 -     30238 A-CTTT---A-CT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123813  7 -    137831 g-c-tt---t-gt
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7358  7 +     22493 G-C-TT---T-GT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19410  7 -     32986 G-C-TT---T-GT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               18062  8 +     18121 G-CTTT---A-CT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90259  8 -     95226 G-TTTC---T-GT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33184  8 -     36801 G-TTTT---A-CT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4804  8 -      8343 A-TTTT---A-CC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253816  8 - 186649187 A-TTTT---A-CT
i Gorilla_gorilla.LT578341.1                             C 0 I 25
s Graphiurus_murinus.GraMur_scaffold_10447                     681  8 -     78134 G-TTTT---A-CT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13666  7 -     40692 G-C-TT---T-AT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35068  7 +     49394 G-C-TT---T-AT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59936  7 -     66874 G-C-TT---T-AT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8810  7 -     42923 G-C-TT---T-AT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15810  7 -     53142 G-C-TT---T-AT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29768  8 -    327341 G-CTTT---A-CT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8013  8 +     48891 G-TTTC---T-GT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1926199  4 -  22651954 -----C---A-CT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                5946  8 +      6687 G-CTTT---G-CT
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6617  8 -     36432 G-TTTT---C-CT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49780  8 +     49977 A-CTTT---C-CC
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141824  8 -    630532 G-TTTT---A-CT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68689  5 +     83186 G-C------A-CT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70477  8 +    143317 A-CTTC---A-CT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4859  8 +     12352 G-TTTT---A-CT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12043  8 +     55766 G-TTTT---A-CT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051641  8 + 191637585 G-TTTT---A-CT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800519  8 +  11177569 G-TTTT---A-CT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3146  8 -    135385 G-GTTC---T-CT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385754  8 +   7955117 G-CTTT---G-CT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1320  7 +     11955 G-C-TT---T-AT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2144  8 -     16823 A-TTTT---C-CT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238483  6 +   9596543 a-tttt---a---
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_3970                 64623  8 -     97402 G-TTTT---C-CT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42264  8 +    110728 G-CTTT---A-CT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61689  8 -     65777 G-TTTT---T-CT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758459  7 +  30322482 G-C-TT---T-AT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3180  8 -     13097 G-CTTT---A-CT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2934  8 +      5940 G-CTTT---A-CT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2764  8 -      5717 G-CTTT---A-CT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9129  8 -     11567 G-CTTT---A-CT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10510  8 -     12945 G-CTTT---A-CT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7988  7 +     29618 G-C-TT---T-AT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7984  7 +     31569 G-C-TT---T-AT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          7994  7 +     24756 G-C-TT---T-AT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       7994  7 +     16388 G-C-TT---T-AT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812508  8 -   3914936 G-CTTT---A-TG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16836  8 +     24238 G-CTTT---A-CT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333664  8 +    662738 G-TTTT---C-CT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               331954  8 -   1826925 A-TTTT---A-CT
i Lophocebus_aterrimus.ctg367                            C 0 I 4
s Loris_lydekkerianus.k141_2031736                            9571  7 +     19643 G-C-TT---T-GT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043228  7 -   6120653 G-C-TT---T-GT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080008  8 +  43346337 G-CTTT---A-CT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613649  8 +  59628241 G-CTTT---A-CA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44270  8 -     61512 G-TTTT---A-CT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371932  8 -  60120075 G-TTTT---A-CT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24195  8 +     30207 G-TTTT---A-CT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21298  8 -     24934 G-TTTT---A-CT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24148  8 +     30527 G-TTTT---A-CT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35324  8 -     50087 G-TTTT---A-CT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45068  8 +     51645 G-TTTT---A-CT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414271  8 - 187317192 g-tttt---a-ct
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398501  8 +  25927173 g-tttt---a-ct
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47673  8 -     62418 G-TTTT---A-CT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  211  8 +     14901 G-TTTT---A-CT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44145  8 +     59329 G-TTTT---A-CT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270053  8 +    668171 G-TTTT---A-CT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  329  8 +      1732 G-TTTT---A-CT
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1851  8 +     17132 G-TTTT---A-CT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222218  8 -    270270 G-CTTT---C-TC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321350  8 +  24302211 G-TTTT---A-CT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356182  8 -    752769 G-TTTT---A-CT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672538  8 -    737560 G-TTTT---A-CT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219825  8 +    317179 G-TTTT---A-CT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499975  8 +  40650429 G-CTTT---G-CT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149379  8 +    207569 G-CTTT---C-CC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25198  8 -     74585 G-TTTT---A-TG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 48899  6 -    140813 g-Ctct---a---
i Meriones_unguiculatus.MerUng_scaffold_7390             I 261 I 1
s Mesocricetus_auratus.KB708134.1                         17428221  6 +  29670104 G-CTCT---A---
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_6114                     80208  8 +     93471 G-TTTT---C-CT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9303  8 +     17804 G-CTTT---A-CT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9805  8 -     12984 G-CCTT---A-CT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18119  8 -     26561 G-CCTT---A-CT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983597  7 +  93316391 G-C-TT---T-AT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44772  8 +    145209 G-CTCT---A-CT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184141  8 +    200668 G-CTTT---T-CT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961363  6 +  27267610 g-CTCT---A---
i Microtus_ochrogaster.CM001695.1                        C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    6362244  8 -   8254450 G-CTTT---T-CT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41145  8 -     48117 G-CTTT---T-CT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21359  7 -     27822 G--TTT---G-CT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7516  8 +     27589 G-CTTT---A-TG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51386  7 -     62432 G-C-TT---T-AT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352100  8 +    437263 A-TTTT---C-CT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178304  8 +    366855 G-CTTT---T-CT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23308  8 -     82753 G-TTTC---T-GT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17521  8 -     63510 G-CTTT---C-CT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38185  8 +     47283 G-ATTT---T-CT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592125  6 + 120012414 g-cttt---a---
i Mus_caroli.LT608237.1                                  I 228 I 1
s Mus_musculus.chr8                                       41686497  6 + 129401213 g-cttt---a---
i Mus_musculus.chr8                                      I 241 I 1
s Mus_pahari.LT608297.1                                   58216355  9 +  89631738 g-ctttatta---
i Mus_pahari.LT608297.1                                  I 213 I 1
s Mus_spretus.CM004101.1                                  39495805  6 + 130317789 g-cttt---a---
i Mus_spretus.CM004101.1                                 I 228 I 1
s Muscardinus_avellanarius.MusAve_scaffold_12866             81763  8 -     86153 G-TTTT---A-CT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354130  8 +  14710649 G-TTTT---A-TG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792436  8 +  10118263 g-cttt---t-ct
i Myotis_brandtii.KE162005.1                             C 0 I 6
s Myotis_davidii.KB100139.1                                4386596  8 +   6019432 g-cttt---t-ct
i Myotis_davidii.KB100139.1                              C 0 I 6
s Myotis_lucifugus.GL429869.1                               382415  8 +   4330536 g-cttt---t-ct
i Myotis_lucifugus.GL429869.1                            C 0 I 6
s Myotis_myotis.MyoMyo_scaffold_66571                         1243  8 +     18357 G-CTTT---T-CT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 6
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118608  8 +    130748 A-TCTT---A-CT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945044  6 +   3037898 G-CTTT---A---
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_1350636                              28009  8 +     34575 G-TTTT---A-CT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468111  8 -  31847680 G-CTTT---A-TG
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226269  8 -   7148211 A-TTTT---C-CT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127008  8 -    149072 G-CTTT---T-CT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52751  8 -    132029 G-TTTT---A-CT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8846  8 -     16345 G-TTTT---A-CT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14731  8 +     22201 G-TTTT---A-CT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412952  8 -  22158432 G-TTTT---A-CT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25129  8 -     54323 G-TTTT---A-CT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197242  8 +   9404916 G-CTTT---A-CA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635571  7 + 196305487 G-C-TT---T-GT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2329  7 -      3937 G-C-TT---T-GT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563810  7 - 199412804 G-C-TT---T-GT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550204  8 -   3988456 G-CTTT---A-CT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053234  8 -  11899542 C-CTTC---A-CT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450707  8 +   2017862 G-CTTt---a-tg
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435144  8 -    630418 G-TTTC---T-GT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13143  8 +    150152 G-TTTC---C-GT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91722  6 -    140218 G-CTCT---A---
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_28377                    2581  6 -     41509 G-CTCT---A---
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 1
s Orcinus_orca.KB316932.1                                  8095539  8 +  10937097 A-TTTT---C-CT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12647  8 -     14239 G-CTTC---A-CT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102672  8 - 174332312 G-CTTT---A-CT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38288  8 +    559221 G-CTTT---A-CA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38968  7 -     51505 G-C-TT---T-GT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             351971  7 +   1103335 g-c-tt---t-gt
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403133  8 -  44047080 G-TTTC---T-GT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3652  8 +     17875 G-TTTC---T-GT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471845  8 - 189151597 A-TTTT---A-CT
i Pan_troglodytes.CM009242.2                             C 0 I 25
s Panthera_onca.PanOnc_flattened_line_3271                   23451  8 -    230217 A-CTTT---A-CT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460777  8 -  18783137 A-CTTT---A-CT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971497  8 +   8748460 A-CTTT---A-CT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614575  8 +   2937107 G-TTTC---T-GC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242183  8 - 183742232 g-tttt---a-ct
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8645  8 +     21308 G-TTTT---A-CT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291219  8 -  20919399 G-TTTT---A-CT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21293  8 -     27687 G-TTTT---A-CT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14439  8 +     16796 G-TTTT---A-CT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21250  8 -     23640 G-TTTT---A-CT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14093  8 +     78924 G-CCTT---A-CT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         643  8 +      9367 A-CCCT---A-CT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245802  6 +  18517816 G-CTCT---A---
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1
s Petromus_typicus.PetTyp_scaffold_17301                     31048  4 -     56120 -----C---A-CT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11394  8 -     15039 A-TTTT---C-CT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1458  8 +     55023 G-TTTT---A-CT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1008  8 -     89929 G-TTTT---A-CT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1597  8 +     40849 G-TTTT---A-CT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253261  8 +  14605196 g-tttt---a-ct
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2767  8 +     22231 G-CTTT---T-CT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63901  8 +    207309 G-CTTT---A-CT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          4994  8 -     25401 G-CTTT---A-CT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30737  8 +     58159 G-CTTT---A-CT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31013  8 +     63561 G-CTTT---A-CT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30773  8 +     51148 G-CTTT---A-CT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555743  8 -   4542175 G-CTTT---A-CT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30757  8 +     51125 G-CTTT---A-CT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3481  8 -      8168 A-TTTT---C-CT
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7160  8 +     39866 G-CTTT---A-CT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2244  8 -      9282 G-CTTT---A-CT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41648  8 -     87950 G-CTTT---A-CT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42042  8 -     88961 G-CTTT---A-CT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6740  8 -     39403 G-CTTT---A-CT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41691  8 +     87928 G-CTTT---A-CT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6737  8 -     60166 G-CTTT---A-CT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13674  8 -     67232 G-CTTT---A-CT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41590  8 -     90634 G-CTTT---A-CT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43057  8 +     89403 G-CTTT---A-CT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176969  8 - 189387572 a-tttt---a-cc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191786  8 -   9816681 A-TTTT---A-CC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26592  8 +     69807 G-TTTT---A-CT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43788  8 -     80239 G-TTTT---A-CT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2332  8 +      3019 G-CTTT---G-CT
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981614  7 +   4620579 G-C-TT---T-AT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565081  7 -   2598838 G-C-TT---T-AT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2717  7 -      7103 G-C-TT---T-AT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3314  7 -     11706 G-C-TT---T-AT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7050  7 -     30655 G-C-TT---T-AT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33375  7 +     46564 G-C-TT---T-AT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93646  7 -     98465 G-C-TT---T-AT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7283  7 +     35169 G-C-TT---T-AT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36306  6 +     52041 g-ctct---a---
i Psammomys_obesus.NESX01036366.1                        I 261 I 1
s Pteronotus_parnellii.KE847780.1                            51187  8 -     66298 G-CTTT---T-CT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3697  8 -     18639 G-TTTT---A-TG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839904  8 -  28871421 G-CTTT---C-cc
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536413  8 -   4952924 G-CTTT---C-CC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098091  8 +  38429054 A-CTTT---A-CT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25966  8 +     91421 G-TTTT---A-CT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152458  8 -   7812017 G-TTTT---A-CT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6833  8 +     72585 G-TTTT---A-CT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52063  8 +     55069 G-TTTC---T-GT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021703  6 -  90668790 g-ctct---a---
i Rattus_norvegicus.chr16                                I 203 I 1
s Rhinolophus_sinicus.LVEH01000134.1                       2913798  8 +   3329780 G-CTTT---C-cc
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              538  8 +      7119 G-TTTT---A-CT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121146  8 + 195417433 g-tttt---a-ct
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235388  8 -   7961872 G-TTTT---A-CT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73826  8 -    116970 G-CTTA---C-CC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3040  8 +     27962 G-CTTT---A-CT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2935  8 +      6077 G-CTTT---A-CT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3026  8 +      5971 G-CTTT---A-CT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2948  8 +      5932 G-CTTT---A-CT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1290  8 -      4390 G-CTTT---A-CT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390725  8 - 209938924 G-CTTT---A-CT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2897  8 +      5979 G-CTTT---A-CT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3659  8 -      4301 G-CTTT---A-CT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6725  8 +     16473 G-TTTC---T-GT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108066  8 + 121099817 G-CTTT---A-CT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29627  8 -     47369 G-CTTT---A-CT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30015  8 -     79414 G-CTTT---A-CT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26706  8 -     34454 G-CTTT---A-CT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14113  8 -     22428 G-CTTT---A-CT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29259  8 -     47109 G-CTTT---A-CT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237319  8 +   5703754 G-CTTT---A-CT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6909  8 +     21866 G-CTTT---A-CT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115015 12 +    313613 GGTTTA-CCAGTC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24285  8 +     27374 G-TTTT---A-CT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27799  8 +     58920 G-TTTT---A-CT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14295  8 -     45317 G-TTTT---A-CT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21954  8 -     42441 G-TTTT---A-CT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24632  8 -     29113 G-TTTT---A-CT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27706  8 -     48123 G-TTTT---A-CT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48212  6 +     77746 G-CTCT---A---
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126            1857324 10 -   1910179 G-TTTA-AAA-CT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4669976  5 +  18376816 g-ttca-------
i Sorex_araneus.JH798187.1                               C 0 I 82
s Spermophilus_dauricus.KZ294078.1                         1867333  8 +   3870691 G-CTTT---G-CT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5686  8 -     97271 G-CTTT---A-CA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123925  8 +    196729 G-CTTT---A-CT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390213  8 +   1523678 G-TTTT---A-CT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13171  8 +     22964 G-CTTT---T-CT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1724  8 +      5583 A-CCTT---G-CT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190618  8 +    199430 G-CTTT---C-GT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104570  8 -    539355 G-CTTT---C-GT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5906  8 +      6850 G-CTTT---A-CT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5957  8 +     20590 G-CTTT---A-CT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352169  8 - 186847797 g-tttt---a-tt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23679  4 -     33621 -----C---A-CC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18829  8 -     31044 G-CTTT---C-CT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479215  8 -    610378 G-CGTT---T-CA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19831  8 +     26378 G-TTTT---A-CT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32509  8 -     78344 G-TTTT---A-CT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19156  8 +     25722 G-TTTT---A-CT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27461  8 -     62838 G-TTTT---A-CT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27507  8 +     46913 G-TTTT---A-CT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8316  8 -     28527 G-TTTT---A-CT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29398  8 -     64340 G-TTTT---A-CT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27435  8 -     63452 G-TTTT---A-CT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8880  8 +     22490 G-TTTT---A-CT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2306  8 -      6147 G-TTTT---A-CT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9211  8 -     13050 G-TTTT---A-CT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254451  8 -   6242583 G-TTTT---A-CT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         475  8 +     19340 G-TTTT---A-CT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172339  8 -    200418 A-CTTC---C-AT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479468  8 -  10818551 G-CTTT---A-CT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832852  8 -   4065304 g-cttt---t-tt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7172  8 -     70247 G-CTTT---T-TT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360274  8 -  33153633 A-TTTT---C-CT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    1476 12 -     21056 GGTTTA-TCATTT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180865  8 +   5085361 G-CTTT---A-GG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24258  7 -     30710 G-C-TT---T-AT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23165  7 -    147434 G-C-TT---T-AT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75349  8 +   5488506 G-TTTT---C-CT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104010  8 -    112863 G-CTTT---A-CA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173108  8 -    224448 G-CTTT---G-CT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27904  8 -     86975 G-CTTT---A-TG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2364  6 +      2695 G-CTTT---A---
i Zapus_hudsonius.ZapHud_scaffold_230229                 C 0 I 1
e Perodicticus_potto.k141_1854441                            17301 503 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          24933 502 +     31479 I
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     19282 636 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4510 25 +     36723 GTTTAG---------T-AGAGA-ATTA---------T-CA--C-TA------T--------------------------A-G
s Acinonyx_jubatus.LLWD01001279.1                           811838 25 +   1699592 CTTTAA---------T-AGAAA-AATA---------C-CA--G-TT------G--------------------------A-G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     19918  3 +     63021 ----------------------------------------------------t--------------------------g-c
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 636 I 131
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414367 25 +  29979442 GTTTAA---------T-AGAAA-AATG---------C-CA--G-TA------T--------------------------A-G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214677 25 +    347723 atttaa---------t-agaaa-aatg---------t-CA--G-TG------T--------------------------A-G
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    16937  6 -     61208 ------------------AGGG-AT---------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_20030                I 1 I 190
s Allenopithecus_nigroviridis.k141_3755588                   46826 25 +     53615 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42787 25 +     44087 GTTTAC---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15412 25 -     21945 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17095 25 +     32033 GTTTAC---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71266 25 -     84148 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-GG------T--------------------------A-G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43505 25 -     78289 GTTGAG---------T-AGAGA-ATTA---------T-CA--G-GG------T--------------------------A-G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42944 25 +     55831 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41394 25 -     64179 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-GG------T--------------------------A-G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23033 25 -     24835 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-GG------T--------------------------A-G
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40019 25 +     45454 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-GG------T--------------------------A-G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45665 25 +     70886 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-GG------T--------------------------A-G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7841 25 +     30854 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-GG------T--------------------------A-G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             31977 25 +     42133 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-GG------T--------------------------A-G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584202 25 +   2318259 GTTTAA---------T-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-G
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176181 25 -    412891 GTTCAA---------T-AGAAA-CTTA---------T-CA--G-AG------T--------------------------A-G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49301 25 -     68529 GTTTAA---------T-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-G
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     220 25 +     17741 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              845 25 -     15923 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1120 25 -     16391 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                680 25 -     17186 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      14995 31 -     32367 GTTTAA---------T-AGAGA-ATTA---------T-CAG-T-GTAATA-GT--------------------------A-C
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 63
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4460 25 -     15198 GTTCAG---------T-AGAAA-ATTA---------T-CA--G-AG------T--------------------------A-G
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273728 25 +  21539123 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9896 25 +     48076 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5033 25 -     28759 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32585 25 +     44353 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47956 25 -     71267 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22015 25 -     33135 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5204 25 +     11645 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5210 25 -     19611 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956036 25 -  23207421 gtttaa---------t-agaaa-attt---------t-ca--g-TG------T--------------------------A-G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3245 25 -      4711 gtttaa---------t-agaaa-attt---------t-ca--g-TG------T--------------------------A-G
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85193 25 +    124022 GTTTAA---------T-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-G
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20730 25 +    288883 GTTTAA---------C-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-G
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355117 25 +  48749331 GTTTAA---------C-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753685 25 +   1948126 GTTTAA---------C-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543824 25 -  45695690 GTTTAA---------C-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-G
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528848 25 -   4408762 GTGTAA---------C-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6914 22 +     28062 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------------------------------------
i Cacajao_ayresi.k141_96119                              I 2 C 0
s Cacajao_calvus.k141_89051                                  42208 22 -     91139 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------------------------------------
i Cacajao_calvus.k141_89051                              I 2 C 0
s Cacajao_hosomi.k141_81245                                  19734 22 +     95584 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------------------------------------
i Cacajao_hosomi.k141_81245                              I 2 C 0
s Cacajao_melanocephalus.k141_619699                         19647 22 +    119600 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------------------------------------
i Cacajao_melanocephalus.k141_619699                     I 2 C 0
s Callibella_humilis.k141_1233062                             9202 25 +     18648 CTTTAG---------T-GGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8741 25 -     13885 CTTTAA---------T-GGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             809 25 -      8861 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453202 25 + 189096842 CTTTAG---------T-GGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                724 25 +      8664 CTTTAG---------T-GGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630023 25 +  17673402 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664309 25 +   7040546 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207969 25 +   1652518 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504388 25 +  60362399 GTTTAA---------T-AGAAA-AATG---------C-CA--G-TG------T--------------------------A-G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8024 25 -     23171 GTTTAA---------T-AGAAA-AATG---------C-CA--G-TG------T--------------------------A-G
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221367 25 +   9314153 GTTTAA---------T-AGAAA-AATG---------C-CA--G-TG------T--------------------------A-G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614502 25 +  59632846 GTTTAA---------T-AGAAA-AATG---------C-CA--G-TG------T--------------------------A-G
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106083 25 -  63665305 GTTTAA---------T-AGAAA-AATG---------C-CA--G-TG------T--------------------------A-G
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407914 25 -  46296322 GTTTAA---------T-AGAAT-ATTA---------T-CA--A-TG------C--------------------------A-G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590187 25 +  44709034 GTTTAA---------T-AGAAT-ATTA---------T-CA--A-TG------C--------------------------A-G
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_108409                   7027 25 +      8835 GTTCAA---------T-AGAGA-ATTG---------T-CA--G-CT------T--------------------------A-C
i Capromys_pilorides.CapPil_scaffold_108409              C 0 N 0
s Carlito_syrichta.NW_007259797.1                           269288 27 +    496798 GTTTAA---------T-AGAGA-ATTA---------C-TAGTG-TG------T--------------------------A-G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                395 25 -      1021 GTTGAG---------T-AGAAA-ATGA---------T-CA--G-AG------T--------------------------G-G
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78326 25 -    217609 GTTTAA---------T-AGAAA-ATTG---------T-CA--G-TG------T--------------------------A-G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995101 25 +  23392119 GTTTAA---------T-AGAGA-ATTA---------T-CA--a-ct------t--------------------------a-c
i Cavia_aperea.AVPZ01000300.1                            C 0 I 333
s Cavia_porcellus.DS562891.1                               4998543 25 +  23407841 GTTTAA---------T-AGAGA-ATTA---------T-CA--A-Ct------t--------------------------a-c
i Cavia_porcellus.DS562891.1                             C 0 I 333
s Cavia_tschudii.CavTsc_scaffold_23560                       61644 25 -     66877 GTTTAA---------T-AGAGA-ATTA---------T-CA--A-CT------T--------------------------A-C
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 313
s Cebuella_niveiventris.k141_592277                           4120 25 -     12580 CTTTAG---------T-GGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42178 25 +     53515 CTTTAG---------T-GGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370109 25 -  26074798 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                6998 25 -     34880 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66093 25 -     89041 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1217 27 -      5494 GTTTAA---------T-AGAGA-ATCA---------C-TAGTG-TG------T--------------------------A-G
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491174 25 -  27778364 GTTTAA---------T-GGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18007 25 +     27315 GTTTAA---------T-GGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140009 25 -   4669795 gtttag---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43751 25 +     47900 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------G-G
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43578 25 -     44860 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43564 25 -    148725 GTTTAG---------T-AGAGA-ATTA---------T-CG--G-TA------T--------------------------A-G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25781 25 -     40656 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5747 25 +     20796 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10824 25 -     17524 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26546 25 -     34525 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10367 25 -     25376 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------C--------------------------A-G
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362967 25 -  39242232 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268679 25 +  21565898 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------C--------------------------A-G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31013 25 -     45857 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25952 25 -     32606 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2111 25 +      8499 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24509 25 +     70610 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21438 25 +     36323 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11805 25 -     19938 GTTTAA---------T-GGAGA-ATCA---------T-CA--C-TT------T--------------------------A-T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29622 25 -     33796 GTTTAA---------C-AGAAA-ATTG---------T-CA--G-TG------T--------------------------A-G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4139 25 -     15404 GTTTAA---------C-AGAAA-ATTG---------T-CA--G-TG------T--------------------------A-G
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8000 25 -     32913 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18413 25 -     40346 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18668 25 +    216457 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18461 25 +     39636 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237581 25 -   2543920 GTTTAA---------T-AGAGA-ATTA---------T-Ca--g-at------t--------------------------a-c
i Chinchilla_lanigera.JH722012.1                         C 0 I 289
s Chiropotes_albinasus.k141_1946120                           3050 25 +      5346 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41545 25 -    112038 CTTTAG---------C-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7116 25 +     34062 CTTTAG---------C-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342329 25 +  18827391 GTTTAC---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8875 26 -     44032 GTTTAC---------T-AGAGA-ATTA--------CT-CA--G-TA------T--------------------------A-G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303653 25 - 135778131 gtttac---------t-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13773 25 +     15858 GTTTAA---------T-AGAGA-ATCA---------T-TA--G-TT------T--------------------------A-T
i Choloepus_didactylus.ChoDid_scaffold_70559             I 663 C 0
s Choloepus_hoffmanni.KN194906.1                            605349 25 -    839153 gtttAA---------T-AGAGA-ATCA---------T-TA--G-TT------T--------------------------A-T
i Choloepus_hoffmanni.KN194906.1                         I 663 C 0
s Colobus_angolensis.KN981557.1                             408091 25 -   2368649 gtttag---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377966 25 - 200372422 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1515 25 -     84244 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806240 14 +  53390261 ---------------------G-CTTG---------T-CA--G-GG------T--------------------------A-G
i Condylura_cristata.JH655891.1                          I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1797 25 -      8242 AATTAA---------C-AGAAA-ATCA---------T-CA--G-TG------T--------------------------A-A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41226  9 -     83289 ------------------AGGA-ATTA---------T---------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             I 1 I 68
s Cricetulus_griseus.LT883664.1                          213113685  9 - 224834208 ------------------AGGA-ATTA---------T---------------------------------------------
i Cricetulus_griseus.LT883664.1                          I 1 I 66
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3299 17 +     87169 CTTTAA---------T-AGAAA-AATA---------T---------------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 6
s Ctenodactylus_gundi.CteGun_scaffold_65                    643921 25 -   1526836 GTTTAA---------A-ACATA-ATTA---------T-CA--G-TA------T--------------------------A-A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 90
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16568 25 +     50838 GTTTAA---------T-AGAGA-ACTG---------T-CA--G-TT------T--------------------------A-C
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 278
s Cuniculus_paca.CunPac_flattened_line_7025                   3045 25 +     36344 GTTTAA---------T-AGAGA-ATTA---------T-CA--A-TT------T--------------------------A-C
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 277
s Dasyprocta_punctata.DasPun_flattened_line_15900            26800 25 +     75252 GTTTAA---------T-AGAGA-ATTA---------A-CA--G-CT------T--------------------------A-C
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 317
s Dasypus_novemcinctus.JH564415.1                          2109149 25 -   2246927 GTTTAA---------T-AGAGA-ATCA---------T-cg--g-tt------t--------------------------a-t
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291575 18 +  12879189 GTTTAA---------C-AGAAA-ATTA---------T-C-------------------------------------------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624365 25 -  35494412 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864206 19 -  20541912 GTTCAA---------T-TGAAA-ATTA---------T-CA------------------------------------------
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663465 25 -   1390856 GTTTAA---------T-GGAAA-ACTA---------T-CA--G-TG------T--------------------------A-G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138251 25 -    198055 GTTTAA---------T-GGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97608 24 -    115145 GTTTGA---------C-GGAGA-AT-A---------C-TG--G-GT------C--------------------------A-C
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 253
s Dipodomys_ordii.KN672350.1                              18949287 21 -  37912305 GTTTAA---------C---A---ATTA---------T-CA--C-CG------T--------------------------a-g
i Dipodomys_ordii.KN672350.1                             C 0 I 236
s Dipodomys_stephensi.DipSte_scaffold_89095                   4229 23 -     10735 GTTCAA---------C---Aaa-atta---------t-ca--c-tg------t--------------------------a-g
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 227
s Dolichotis_patagonum.DolPat_scaffold_80628                  9070 21 +     14636 GCTTAA---------T-AGAGA-ATCA---------T-CA--A-C-------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 312
s Echinops_telfairi.JH980293.1                            62853743 25 - 111700974 GTCCAA---------T-CGAGT-TTTA---------T-CA--G-TC------G--------------------------A-G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5262 25 +     19438 atttaa---------t-agaaa-atta---------t-ca--g-TG------T--------------------------A-A
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238581 25 -    607251 GTTTAA---------T-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107542 25 -  10337057 GTTTAA---------T-AGAGT-ACTA---------T-TA--G-TA------T--------------------------A-G
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          29958  9 +    110024 ------------------AGGA-ATTA---------T---------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 1 I 87
s Ellobius_talpinus.LOJH01026522.1                           11933  9 +     18970 ------------------AGGA-ATTA---------T---------------------------------------------
i Ellobius_talpinus.LOJH01026522.1                       I 1 I 88
s Enhydra_lutris.KZ291758.1                               24915102 25 +  41312741 ATTTAA---------T-AGATA-AATG---------C-CA--G-TT------C--------------------------A-G
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577834 25 +  14770903 gtttaa-------taa-a--aa-atta---------t-ca--g-aG------T--------------------------A-G
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040062 25 -   4378816 gtttaa---------t-aaaaa-atta---------t-ca--g-tg------T--------------------------T-G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21373986 25 +  39960074 gtttaa---------t-aaaaa-atta---------t-ca--g-tg------T--------------------------T-G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410772 25 -    498745 gtttaa---------t-aaaaa-atta---------t-ca--g-tg------T--------------------------T-G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3664471 21 +   7059049 TATTAG---------A-----A-ATTA---------G-CA--A-TG------C--------------------------A-T
i Erinaceus_europaeus.JH835339.1                         C 0 I 1
s Erythrocebus_patas.Contig38                               261856 25 +  21539334 GTTTAC---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63915 25 -    133382 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4132 25 +      7672 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13748 25 -     24895 GTTTAA---------C-AGAAA-ATTA---------T-TA--G-TG------T--------------------------A-G
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41457 25 -     70999 GTTTAA---------C-AGAAA-ATTA---------T-TA--G-TG------T--------------------------A-G
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85419 25 +    112731 GTTTAA---------C-AGAAA-ATTA---------T-TA--G-TG------T--------------------------A-G
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             41988 25 +     68309 GTTTAA---------C-AGAAA-ATTA---------T-TA--G-TG------T--------------------------A-G
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52314 25 -     65740 ATTTAA---------C-AGAAA-ATTA---------T-TA--G-TG------T--------------------------A-G
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22943 25 -     75513 GTTTAA---------C-AGAAA-ATTA---------T-TA--G-TG------T--------------------------A-G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47140 25 -     97555 GTTTAA---------C-AGAAA-ATTA---------T-TA--G-TG------T--------------------------A-G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3865 25 +     30972 GTTTAA---------C-AGAAA-ATTA---------T-TA--G-TG------T--------------------------A-G
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41585 25 -     52037 GTTTAA---------C-AGAAA-ATTA---------T-TA--G-TG------T--------------------------A-G
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              57987 25 -    111500 GTTTAA---------C-AGAAA-ATTA---------T-TA--G-TG------T--------------------------A-G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245751 22 - 206538554 CTTTAA---------T-AGAAA-AATA---------C-CA--G-TT------------------------------------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115536 22 - 205367284 CTTTAA---------T-AGAAA-AATA---------c-ca--g-tt------------------------------------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26634 25 -     30238 CTTTAA---------T-AGAAA-AATA---------C-CA--G-TT------G--------------------------A-G
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123820 18 -    137831 atttAA---------C-AAAAA-ATTA---------T-C-------------------------------------------
i Galago_moholi.ctg3793                                  C 0 I 2
s Galago_senegalensis.k141_991736                             7365 18 +     22493 ATTTAA---------C-AAAAA-ATTA---------T-C-------------------------------------------
i Galago_senegalensis.k141_991736                        C 0 I 2
s Galagoides_demidoff.k141_561628                            19417 25 -     32986 ATTTAA---------C-AAAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               18070 25 +     18121 GCTTAA---------T-AGAGA-ATTA---------T-CG--G-TG------T--------------------------A-G
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90267 25 -     95226 GTTTAA---------T-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-G
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33192 15 -     36801 GTTTAA---------TGAGAGA-AT---------------------------------------------------------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 91
s Gorilla_beringei.k141_3358147                               4812 25 -      8343 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 70309 25 +  33314783 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Gorilla_gorilla.LT578336.1                             I 121 I 75
s Graphiurus_murinus.GraMur_scaffold_10447                     689 15 -     78134 GTTTAA---------TGAGAGA-AT---------------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 90
s Hapalemur_alaotrensis.k141_330369                          13673 25 -     40692 GTTTAA---------A-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35075 25 +     49394 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59943 25 -     66874 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8817 25 -     42923 GTTTAA---------A-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15817 25 -     53142 GTTTAA---------A-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29776 26 -    327341 CTTTAA---------T-AGAAAAAATA---------T-AA--A-TG------T--------------------------A-C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8021 25 +     48891 GTTTAA---------T-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-G
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1926203 25 -  22651954 GTTTCA---------T-AGAGA-ATTA---------T-Ca--g-ct------t--------------------------a-a
i Heterocephalus_glaber.JH602082.1                       C 0 I 5443
s Heterohyrax_brucei.HetBruBak_scaffold_128297                5954 25 +      6687 GTTGAA---------T-ACAGT-ATTA---------G-CA--G-TT------T--------------------------A-G
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6625 25 -     36432 GTTTAA---------T-AGAAA-ATTA---------T-TG--G-TG------T--------------------------A-G
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49788 25 +     49977 TTTTAA---------T-AGAAA-ATTA---------T-CT--G-TG------G--------------------------A-A
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141832 25 -    630532 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68694 25 +     83186 CTTGAA---------T-AGAAA-AATG---------T-CA--G-AG------T--------------------------A-G
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70485 26 +    143317 GTTTAA---------T-AGAGA-ATTA---------T-CG--G-TT--T---T--------------------------T-C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 353
s Hylobates_agilis.k141_1155965                               4867 25 +     12352 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12051 25 +     55766 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051649 25 + 191637585 GTTTAG---------T-AGATA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800527 25 +  11177569 GTTTAG---------T-AGATA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3154 25 -    135385 GTTTAA---------T-AGAGA-ATTA---------T-CA--T-CT------T--------------------------A-C
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 323
s Ictidomys_tridecemlineatus.JH393364.1                     385762 31 +   7955117 GTTAAA---------T-AGAGA-ATTG---------T-TA--GGGTAAta-gt--------------------------a-c
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 78
s Indri_indri.k141_2415743                                    1327 25 +     11955 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2152 25 -     16823 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238490  7 +   9596543 ------------------aggg-aTC--------------------------------------------------------
i Jaculus_jaculus.JH725527.1                             I 1 I 188
s Kogia_breviceps.KogBre_flattened_line_3970                 64631 25 -     97402 GTTTAA---------T-AGGAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42272 25 +    110728 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61697 22 -     65777 GTGTAA---------T-A---A-ATTA---------T-CA--G-AG------T--------------------------A-A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758466 25 +  30322482 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3188 23 -     13097 CT--AG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2942 23 +      5940 CT--AG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2772 23 -      5717 CT--AG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9137 34 -     11567 CTGGAGAGAGTAAAGT-GGAGA-ATTA---------T-TA--G-TG------T--------------------------A-G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10518 34 -     12945 CTGGAGAGAGTAAAGT-GGAGA-ATTA---------T-TA--G-TG------T--------------------------A-G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          7995 25 +     29618 GTTTAA---------C-AGAAA-ATTA---------A-CA--G-TG------T--------------------------A-G
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              7991 25 +     31569 GTTTAA---------C-AGAAA-ATTA---------A-CA--G-TG------T--------------------------A-G
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8001 25 +     24756 GTTTAA---------C-AGAAA-ATTA---------G-CA--G-TG------T--------------------------A-G
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8001 25 +     16388 GTGTAA---------C-AGAAA-ATTA---------A-CA--G-TG------T--------------------------A-G
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812516 25 -   3914936 GTTTAA---------T-AGAAA-AATG---------C-CA--G-TG------T--------------------------A-G
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16844 24 +     24238 G-TTAA---------T-AGAGA-ATTA---------C-CA--G-TT------T--------------------------A-C
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333672 25 +    662738 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               331966 21 -   1826925 ----AG---------T-AGAGA-ATTA---------T-CA--G-TA------C--------------------------A-G
i Lophocebus_aterrimus.ctg367                            I 4 I 932
s Loris_lydekkerianus.k141_2031736                            9578 25 +     19643 ATTTAA---------C-AAAAA-TTTA---------T-CA--G-TA------T--------------------------A-G
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043235 25 -   6120653 ATTTAA---------C-AAAAA-TTTA---------T-CA--G-TA------T--------------------------A-G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080016 25 +  43346337 GTTTAA---------T-AGAAT-ATTA---------T-CA--G-TT------T--------------------------A-G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613657 25 +  59628241 GTTTAA---------T-AGAAA-AATG---------C-CA--G-TG------T--------------------------A-G
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44278 25 -     61512 GCTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371940 25 -  60120075 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24203 25 +     30207 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21306 25 -     24934 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24156 25 +     30527 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35332 25 -     50087 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45076 25 +     51645 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414279 25 - 187317192 gtttag---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398509 25 +  25927173 gtttag---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47681 25 -     62418 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  219 25 +     14901 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44153 25 +     59329 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270061 25 +    668171 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  337 25 +      1732 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1859 25 +     17132 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222226 25 -    270270 ATTTAA---------T-AGAAA-ATTA---------C-CA--G-TG------T--------------------------A-A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321358 25 +  24302211 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356190 25 -    752769 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672546 25 -    737560 GTTTAA---------T-AGAAG-ATTA---------T-CC--A-TG------T--------------------------A-G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219833 22 +    317179 GTTTAA---------T-AG----ATTA---------T-CC--A-TG------T--------------------------A-G
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7499983 31 +  40650429 GTTAAA---------T-AGAGA-ATTG---------T-TA--AGGTAATA-gt--------------------------a-c
i Marmota_marmota.CZRN01000018.1                         C 0 I 77
s Megaderma_lyra.MegLyr_scaffold_4542                       149387 20 +    207569 AATTAA---------T-AGAAA-ATTG---------T-CA--G---------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_19308             25206 25 -     74585 ATTTAA---------T-AGATA-AATG---------C-AA--G-TG------T--------------------------A-G
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 48906 18 -    140813 ------------------aaat-attagcccctctct---------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 I 256
s Mesocricetus_auratus.KB708134.1                         17428228  9 +  29670104 ------------------AGGA-ATTA---------T---------------------------------------------
i Mesocricetus_auratus.KB708134.1                        I 1 I 69
s Mesoplodon_bidens.MesBid_scaffold_6114                     80216 25 +     93471 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9311 25 +     17804 CTTTAG---------T-GGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9813 25 -     12984 CTTTAG---------T-GGAGA-ATTA---------T-CA--A-TG------T--------------------------A-G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18127 25 -     26561 CTTTAG---------T-GGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983604 25 +  93316391 GTTTAT---------C-AGAAA-ATTG---------T-CA--G-TG------T--------------------------A-G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44780 25 +    145209 GTTCAA---------T-AGAGT-TTTA---------C-CA--G-TC------T--------------------------C-A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184149 25 +    200668 GTTCTA---------T-AGAAA-ATTA---------T-CA--G-AG------C--------------------------A-G
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961370  9 +  27267610 ------------------AGGA-ATTA---------T---------------------------------------------
i Microtus_ochrogaster.CM001695.1                        I 1 I 113
s Miniopterus_natalensis.LDJU01000034.1                    6362252 25 -   8254450 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-AG------T--------------------------A-G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41153 25 -     48117 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-AG------T--------------------------A-G
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21366 25 -     27822 GTTTAC---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7524 25 +     27589 GTTTAA---------T-AGAAA-AATG---------C-CA--G-TG------T--------------------------A-G
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51393 25 -     62432 GTTTAA---------C-AGAAA-ATTG---------T-CA--G-TG------T--------------------------T-T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352108 25 +    437263 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178312 25 +    366855 CTTCAA---------T-AGAAA-ATTA---------T-CA--G-AG------T--------------------------A-G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23316 25 -     82753 GTTTAA---------T-AGAAT-GTTA---------T-CA--G-TG------T--------------------------A-G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17529 26 -     63510 CTTTAA---------T-AGAAAAAATA---------T-AA--A-TG------T--------------------------A-C
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38193 24 +     47283 ATTTAA---------T-AAAA--AAAA---------T-CA--A-TG------T--------------------------A-G
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592132  9 + 120012414 ------------------agaa-atta---------t---------------------------------------------
i Mus_caroli.LT608237.1                                  I 1 I 80
s Mus_musculus.chr8                                       41686504  9 + 129401213 ------------------agaa-atta---------t---------------------------------------------
i Mus_musculus.chr8                                      I 1 I 93
s Mus_pahari.LT608297.1                                   58216365  9 +  89631738 ------------------agaa-atta---------t---------------------------------------------
i Mus_pahari.LT608297.1                                  I 1 I 89
s Mus_spretus.CM004101.1                                  39495812  9 + 130317789 ------------------agaa-atta---------t---------------------------------------------
i Mus_spretus.CM004101.1                                 I 1 I 81
s Muscardinus_avellanarius.MusAve_scaffold_12866             81771 16 -     86153 ATTTAA---------TAAAAAA-AAT--------------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 114
s Mustela_putorius.JH418006.1                             14354138 25 +  14710649 ACTTAA---------T-AGATA-AATG---------T-CA--G-TG------T--------------------------A-G
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792450 17 +  10118263 ------------------aaaa-atta---------t-ca--g-ag------t--------------------------A-G
i Myotis_brandtii.KE162005.1                             I 6 C 0
s Myotis_davidii.KB100139.1                                4386610 17 +   6019432 ------------------aaaa-atta---------t-ca--g-ag------t--------------------------A-G
i Myotis_davidii.KB100139.1                              I 6 C 0
s Myotis_lucifugus.GL429869.1                               382429 17 +   4330536 ------------------aaaa-aata---------t-ca--g-ag------t--------------------------A-G
i Myotis_lucifugus.GL429869.1                            I 6 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1257 17 +     18357 ------------------AAAA-TTTA---------T-CA--G-AG------T--------------------------A-G
i Myotis_myotis.MyoMyo_scaffold_66571                    I 6 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118616 25 +    130748 GATTAA---------T-AGAGA-GTCA---------T-CA--G-TT------T--------------------------A-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945051  7 +   3037898 ------------------AGGA-aat--------------------------------------------------------
i Nannospalax_galili.KL204047.1                          I 1 I 65
s Nasalis_larvatus.k141_1350636                              28017 25 +     34575 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468119 25 -  31847680 GTTTAA---------T-AGAAA-AATG---------T-CA--G-TG------T--------------------------A-G
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226277 25 -   7148211 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127016 25 -    149072 GTGTAG---------T-ACAAA-GTTA---------T-CA--G-AG------A--------------------------A-G
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52759 25 -    132029 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8854 25 -     16345 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14739 25 +     22201 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412960 25 -  22158432 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25137 25 -     54323 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197250 25 +   9404916 GTTTAA---------T-AGAAA-AATG---------C-CA--G-TG------T--------------------------A-G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635578 25 + 196305487 ATTTAA---------C-AAAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2336 25 -      3937 ATTTAA---------C-AAAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563817 51 - 199412804 ATTTAA---------C-AAAAA-ATTA---------T-CA--G-TG------TATTCAGTATACACTGATATACTCCTCA-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550212 23 -   3988456 G-T-AA---------T-AGAGA-ATTA---------C-CA--G-TT------T--------------------------A-C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053242 25 -  11899542 GTTTAA---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-c
i Octodon_degus.JH651603.1                               C 0 I 423
s Odobenus_rosmarus.KB229312.1                             1450715 25 +   2017862 gtttaa---------a-agaaa-aatg---------c-ca--g-tG------T--------------------------A-G
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435152 25 -    630418 GTTTAA---------T-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-G
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13151 25 +    150152 GTTTAA---------T-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91729  9 -    140218 ------------------AGGA-ATTA---------T---------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 I 90
s Onychomys_torridus.OnyTor_scaffold_28377                    2588  9 -     41509 ------------------GGGa-atta---------t---------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_28377               I 1 I 125
s Orcinus_orca.KB316932.1                                  8095547 25 +  10937097 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12655 25 -     14239 GTTTAA---------T-AGAGT-ATTA---------T-CA--A-TT------T--------------------------A-G
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102680 24 - 174332312 G-TTAA---------T-AGAGA-ATTA---------C-CA--G-TT------T--------------------------A-C
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38296 25 +    559221 GTTTAA---------T-AGAAA-AATG---------C-TA--G-TG------T--------------------------A-G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38975 18 -     51505 ATTTAA---------C-AAAAA-ATTA---------T-C-------------------------------------------
i Otolemur_crassicaudatus.k141_649260                    C 0 I 2
s Otolemur_garnettii.GL873799.1                             351978 18 +   1103335 atttaa---------c-aaaaa-atta---------t-c-------------------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 I 2
s Ovis_aries.CM001607.2                                   26403141 25 -  44047080 GTTTAA---------T-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3660 25 +     17875 GTTTAA---------T-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             11431 28 -     26668 GTTTAG---------TAAGAGA-ATTA---------T-CA--G-TA------TA---A---------------------A-G
i Pan_troglodytes.NBAG03003091.1                         I 13 I 94
s Panthera_onca.PanOnc_flattened_line_3271                   23459 25 -    230217 CTTTAA---------T-AGAAA-AATA---------C-CA--G-TT------G--------------------------A-G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460785 25 -  18783137 CTTTAA---------T-AGAAA-AATA---------C-CA--G-TT------G--------------------------A-G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971505 25 +   8748460 CTTTAA---------T-AGAAA-AATA---------C-CA--G-TT------G--------------------------A-G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614583 25 +   2937107 GTTTAA---------T-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-G
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242191 25 - 183742232 gtttag---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8653 25 +     21308 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291227 25 -  20919399 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21301 25 -     27687 GTTTAG---------T-ACAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14447 25 +     16796 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21258 25 -     23640 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14101 25 +     78924 CTTTAA---------T-AGAAA-AAAA---------T-CA--G-TA------T--------------------------A-G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         651 25 +      9367 GTTTAA---------A-AGAAA-Ataa---------t-ca--c-tg------c--------------------------a-g
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 200
s Peromyscus_maniculatus.KI615324.1                         245809  9 +  18517816 ------------------AGGA-ATTA---------T---------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      I 1 I 100
s Petromus_typicus.PetTyp_scaffold_17301                     31052 25 -     56120 GTGTAA---------T-AGAGA-ATTA---------T-CA--G-GT------T--------------------------A-C
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 204
s Phocoena_phocoena.PhoPho_flattened_line_46867              11402 25 -     15039 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1466 24 +     55023 GTTTAG---------T-AGAGA-ATTA---------T-C---G-TC------T--------------------------A-G
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1016 24 -     89929 GTTTAG---------T-AGAGA-ATTA---------T-C---G-TA------G--------------------------A-G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1605 24 +     40849 GTTTAG---------T-AGAGA-ATTA---------T-C---G-TA------G--------------------------A-G
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253269 24 +  14605196 gtttag---------T-AGAGA-ATTA---------T-C---G-TA------T--------------------------A-G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2775 25 +     22231 GTTTAA----TA---A-A--AA-ATGA---------T-CA--G-AG------T--------------------------A-G
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63909 25 +    207309 CTTTTG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5002 25 -     25401 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30745 25 +     58159 CTTTTG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31021 25 +     63561 CTTTTG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30781 25 +     51148 CTTTTG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555751 25 -   4542175 CTTTTG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30765 25 +     51125 CTTTTG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3489 25 -      8168 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7168 25 +     39866 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2252 25 -      9282 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41656 25 -     87950 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42050 25 -     88961 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6748 25 -     39403 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41699 25 +     87928 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6745 25 -     60166 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13682 25 -     67232 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41598 25 -     90634 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43065 25 +     89403 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   176977 25 - 189387572 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191794 25 -   9816681 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26600 25 +     69807 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43796 25 -     80239 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2340 25 +      3019 GTTGAA---------T-ACAGT-ATTA---------G-CA--G-TT------T--------------------------A-G
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981621 25 +   4620579 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565088 25 -   2598838 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2724 25 -      7103 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3321 25 -     11706 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7057 25 -     30655 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33382 25 +     46564 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93653 25 -     98465 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7290 25 +     35169 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36313 18 +     52041 ------------------aaAT-ATTagcccctctct---------------------------------------------
i Psammomys_obesus.NESX01036366.1                        I 1 I 190
s Pteronotus_parnellii.KE847780.1                            51195 25 -     66298 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-AG------T--------------------------A-G
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3705 25 -     18639 ATTTAA---------T-AGATA-AATG---------C-CA--G-TG------T--------------------------A-G
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839912 25 -  28871421 atttaa---------t-ggaat-atta---------t-ca--g-cG------T--------------------------A-A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536421 25 -   4952924 atttaa---------t-agaat-atta---------t-ca--G-TG------T--------------------------A-A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098099 25 +  38429054 CTTTAG---------T-AGAAA-AATA---------C-CA--G-TT------G--------------------------A-G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25974 25 +     91421 GTTTAG---------T-AGAGA-ATTA---------T-CT--G-TA------T--------------------------A-G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152466 25 -   7812017 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6841 25 +     72585 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52071 25 +     55069 GTTTAA---------T-AGAAT-ATTA---------T-CA--T-TG------T--------------------------A-G
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021710  9 -  90668790 ------------------aaaa-atta---------t---------------------------------------------
i Rattus_norvegicus.chr16                                I 1 I 100
s Rhinolophus_sinicus.LVEH01000134.1                       2913806 25 +   3329780 atttaa---------t-agaaa-atta---------t-ca--G-TG------T--------------------------A-A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              546 25 +      7119 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121154 25 + 195417433 gtttag---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235396 25 -   7961872 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73834 13 -    116970 ATTAAA---------T-AGAAA-A----------------------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3048 25 +     27962 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2943 25 +      6077 CTTTAG---------T-AGAGA-ATTG---------T-CA--G-TG------T--------------------------A-G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3034 25 +      5971 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2956 25 +      5932 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1298 25 -      4390 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390733 25 - 209938924 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2905 25 +      5979 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3667 25 -      4301 CTTTAG---------T-AGAGA-ATTG---------T-CA--G-TG------T--------------------------A-G
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6733 25 +     16473 GTTTAG---------T-AGAAT-ATTA---------T-CA--A-TG------T--------------------------A-G
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108074 25 + 121099817 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------T-G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29635 25 -     47369 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------T-G
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30023 25 -     79414 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------T-G
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26714 25 -     34454 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------T-G
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14121 25 -     22428 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------T-G
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29267 25 -     47109 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------T-G
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237327 25 +   5703754 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6917 25 +     21866 CTTTAG---------T-AGAGA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115027 21 +    313613 AGTAGA---------A-----G-ATTG---------T-CA--G-GG------T--------------------------A-G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24293 25 +     27374 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27807 25 +     58920 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14303 25 -     45317 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21962 25 -     42441 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24640 25 -     29113 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27714 25 -     48123 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48219  9 +     77746 ------------------AGAC-ATTA---------T---------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                I 1 I 66
s Solenodon_paradoxus.SolPar_flattened_line_126            1857334 21 -   1910179 GTTTAA---------T-----G-ATTA---------T-CA--A-TG------C--------------------------A-G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867341 31 +   3870691 GTTAAA---------T-AGAGA-ATTG---------T-TA--GGGTAATA-GT--------------------------A-C
i Spermophilus_dauricus.KZ294078.1                       C 0 I 79
s Spilogale_gracilis.SpiGra_flattened_line_13525              5694 25 -     97271 ATTTAA---------T-AGAAA-AATG---------C-CA--G-TG------T--------------------------A-G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123933 26 +    196729 CTTTAA---------T-AGAAAAAATA---------C-AA--A-TG------T--------------------------A-C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390221 25 +   1523678 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13179 25 +     22964 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-AG------T--------------------------A-G
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1732 25 +      5583 GATTAA---------T-AAAGA-GTCA---------T-CA--G-TT------T--------------------------A-T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190626 25 +    199430 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104578 25 -    539355 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5914 25 +      6850 GTTTAA---------T-AGAGA-ATTA---------C-TA--G-TG------T--------------------------A-G
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5965 25 +     20590 GTTTAA---------T-AGAGA-ATTA---------C-TA--G-TG------T--------------------------A-G
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352177 25 - 186847797 gtttag---------t-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23683 25 -     33621 ATATAA---------T-AGAGA-ATTA---------T-CA--G-CT------T--------------------------A-C
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 200
s Tolypeutes_matacus.TolMat_scaffold_31955                   18837 25 -     31044 GTTTAA---------T-AGAGA-ATTA---------T-CA--G-TT------T--------------------------A-T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479223 25 -    610378 GTTTTG---------T-AGAAA-ATTA---------T-CA--G-AG------T--------------------------A-G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19839 25 +     26378 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32517 25 -     78344 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19164 25 +     25722 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27469 25 -     62838 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27515 25 +     46913 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8324 25 -     28527 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29406 25 -     64340 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27443 25 -     63452 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8888 25 +     22490 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2314 25 -      6147 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9219 25 -     13050 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254459 25 -   6242583 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         483 25 +     19340 GTTTAG---------T-AGAGA-ATTA---------T-CA--G-TA------T--------------------------A-G
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172347 25 -    200418 GTTTAG---------T-AGATA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479476 25 -  10818551 GTTTAA---------T-AGAGT-ATTC---------T-TA--G-TT------T--------------------------A-G
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832860 25 -   4065304 gtttga---------t-aGAGA-ATTA---------C-CA--C-TA------T--------------------------A-G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7180  6 -     70247 GTTTGA----------------------------------------------------------------------------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360282 25 -  33153633 GTTTAA---------T-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    1488 21 -     21056 ATTAGA---------A-----G-ATCA---------T-CA--G-CA------T--------------------------A-G
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180873 25 +   5085361 GTTTAA---------T-AGAAA-AATG---------C-CA--G-TG------T--------------------------A-G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24265 25 -     30710 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23172 25 -    147434 GTTTAA---------C-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75357 25 +   5488506 GTTTGA---------T-AGAAA-ATTA---------T-CA--G-TG------T--------------------------A-G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104018 25 -    112863 GTTTAA---------T-AGAAA-AATG---------C-CA--G-TG------T--------------------------A-G
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173116 30 -    224448 GTTAAA---------C-AGAGA-ATTA---------T-CA--G-GTAATA-GT--------------------------A-C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 84
s Zalophus_californianus.ZalCal_flattened_line_17732         27912 24 -     86975 GT-TAA---------A-AGAAA-AATG---------C-CA--G-GG------T--------------------------A-G
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_230229                      2371  9 +      2695 ------------------AGGA-ATTA---------T---------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_230229                 I 1 N 0
e Sorex_araneus.JH798187.1                                 4669981 82 +  18376816 I
e Crocidura_indochinensis.CroInd_scaffold_77846               6137 25 +     12657 I
e Perodicticus_potto.k141_1854441                            17301 503 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          24933 502 +     31479 I
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Castor_canadensis.CasCan_scaffold_39952                    20474 6252 -     39886 I
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4535  5 +     36723 T-----GT---TT
s Acinonyx_jubatus.LLWD01001279.1                           811863  5 +   1699592 C-----TT---TT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     20052  5 +     63021 t-----at---tt
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 131 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414392  5 +  29979442 T-----AT---TT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214702  5 +    347723 T-----AT---TT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17133  5 -     61208 T-----AT---TT
i Allactaga_bullata.AllBul_scaffold_20030                I 190 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46851  5 +     53615 T-----CT---TT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42812  5 +     44087 T-----CT---TT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15437  5 -     21945 T-----CT---TT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17120  5 +     32033 T-----CT---TT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71291  5 -     84148 T-----GT---TT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43530  5 -     78289 T-----GT---TT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42969  5 +     55831 T-----GT---TT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41419  5 -     64179 T-----GT---TT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23058  5 -     24835 T-----GT---TT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40044  5 +     45454 T-----GT---TT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45690  5 +     70886 T-----GT---TT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7866  5 +     30854 T-----GT---TT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32002  5 +     42133 T-----GT---TT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584227  5 +   2318259 T-----AT---TT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176206  5 -    412891 G-----AT---TT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49326  5 -     68529 T-----AT---TT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     245  5 +     17741 T-----GT---TT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              870  5 -     15923 T-----GT---TT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1145  5 -     16391 T-----GT---TT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                705  5 -     17186 T-----GT---TT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15089  5 -     32367 T-----AT---TT
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 63 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4485  5 -     15198 T-----AT---TT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273753  5 +  21539123 T-----GT---TT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9921  5 +     48076 T-----GT---TT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5058  5 -     28759 T-----GT---TT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32610  5 +     44353 T-----GT---TT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47981  5 -     71267 T-----GT---TT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22040  5 -     33135 T-----GT---TT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5229  5 +     11645 T-----GT---TT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5235  5 -     19611 T-----GT---TT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956061  5 -  23207421 T-----AT---TT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3270  5 -      4711 T-----AT---TT
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85218  5 +    124022 T-----AT---TT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20755  5 +    288883 T-----CT---TT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355142  5 +  48749331 T-----CT---TT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753710  5 +   1948126 T-----CT---TT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543849  5 -  45695690 T-----CT---TT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528873  5 -   4408762 T-----CT---TT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Callibella_humilis.k141_1233062                             9227  5 +     18648 T-----GT---TT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8766  5 -     13885 T-----GT---TT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             834  5 -      8861 T-----GT---TT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453227  5 + 189096842 T-----GT---TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                749  5 +      8664 T-----GT---TT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630048  5 +  17673402 T-----TT---TT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664334  5 +   7040546 T-----TT---TT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207994  5 +   1652518 T-----TT---TT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504413  5 +  60362399 A-----GT---TT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8049  5 -     23171 A-----GT---TT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221392  5 +   9314153 A-----GT---TT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614527  5 +  59632846 A-----GT---TT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106108  5 -  63665305 A-----GT---TT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407939  5 -  46296322 T-----AT---TT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590212  5 +  44709034 T-----AT---TT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    562  5 -      1880 C-----CT---TT
i Capromys_pilorides.CapPil_scaffold_652123              N 0 C 0
s Carlito_syrichta.NW_007259797.1                           269315  5 +    496798 T-----AT---TT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                420  5 -      1021 T-----AT---TG
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26726  5 -     39886 T-----AT---TT
i Castor_canadensis.CasCan_scaffold_39952                I 6252 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78351  5 -    217609 T-----AT---TT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995459  5 +  23392119 T-----AT---TT
i Cavia_aperea.AVPZ01000300.1                            I 333 C 0
s Cavia_porcellus.DS562891.1                               4998901  5 +  23407841 T-----AT---TT
i Cavia_porcellus.DS562891.1                             I 333 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61982  5 -     66877 T-----AT---TT
i Cavia_tschudii.CavTsc_scaffold_23560                   I 313 C 0
s Cebuella_niveiventris.k141_592277                           4145  5 -     12580 T-----GT---TT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42203  5 +     53515 T-----GT---TT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370134  5 -  26074798 T-----GT---TT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7023  5 -     34880 T-----GT---TT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66118  5 -     89041 T-----GT---TT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1244  5 -      5494 T-----AT---TT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491199  5 -  27778364 T-----AT---TT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18032  5 +     27315 T-----AT---TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140034  5 -   4669795 T-----CT---TT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43776  5 +     47900 T-----CT---TT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43603  5 -     44860 T-----CT---TT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43589  5 -    148725 T-----CT---TT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25806  5 -     40656 T-----CT---TT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5772  5 +     20796 T-----CT---TT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10849  5 -     17524 T-----CT---TT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26571  5 -     34525 T-----CT---TT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10392  5 -     25376 T-----CT---TT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362992  5 -  39242232 T-----CT---TT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268704  5 +  21565898 T-----CT---TT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31038  5 -     45857 T-----CT---TT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25977  5 -     32606 T-----CT---TT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2136  5 +      8499 T-----CT---TT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24534  5 +     70610 T-----CT---TT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21463  5 +     36323 T-----CT---TT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11830  5 -     19938 T-----AT---TT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29647  5 -     33796 T-----GT---TT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4164  5 -     15404 T-----GT---TT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8025  5 -     32913 T-----GT---TT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18438  5 -     40346 T-----GT---TT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18693  5 +    216457 T-----GT---TT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18486  5 +     39636 T-----GT---TT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237895  5 -   2543920 T-----AT---TT
i Chinchilla_lanigera.JH722012.1                         I 289 C 0
s Chiropotes_albinasus.k141_1946120                           3075  5 +      5346 T-----GT---TT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41570  1 -    112038 T------------
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7141  1 +     34062 T------------
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342354  5 +  18827391 T-----CT---TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8901  5 -     44032 T-----CT---TT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303678  5 - 135778131 T-----CT---TT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13798  5 +     15858 T-----AT---TT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605374  5 -    839153 T-----AT---TT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408116  5 -   2368649 T-----CT---TT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377991  5 - 200372422 T-----CT---TT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1540  5 -     84244 T-----CT---TT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806254  5 +  53390261 T-----AT---TC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1822  5 -      8242 T-----AG---TT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41303  5 -     83289 C-----AT---TT
i Cricetomys_gambianus.CriGam_scaffold_14425             I 68 C 0
s Cricetulus_griseus.LT883664.1                          213113760  5 - 224834208 T-----AT---TT
i Cricetulus_griseus.LT883664.1                          I 66 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3322  3 +     87169 T-----TA-----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 6 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644036  5 -   1526836 T-----AG---TT
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 90 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16871  5 +     50838 C-----AT---TT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 278 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27142  5 +     75252 T-----AT---TT
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 317 C 0
s Dasypus_novemcinctus.JH564415.1                          2109174  5 -   2246927 t-----at---tt
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624390  5 -  35494412 T-----AT---TT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864228  5 -  20541912 T-----AT---TT
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663490  5 -   1390856 T-----AT---TT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138276  5 -    198055 T-----AT---TT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97885  5 -    115145 T-----AT---TT
i Dinomys_branickii.DinBra_scaffold_10381                I 253 C 0
s Dipodomys_ordii.KN672350.1                              18949544  1 -  37912305 T------------
i Dipodomys_ordii.KN672350.1                             I 236 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4479  1 -     10735 T------------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 227 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9403  5 +     14636 T-----AT---TT
i Dolichotis_patagonum.DolPat_scaffold_80628             I 312 C 0
s Echinops_telfairi.JH980293.1                            62853768  5 - 111700974 T-----GT---TT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5287  5 +     19438 T-----AT---TT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238606  5 -    607251 T-----AT---TT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107567  5 -  10337057 T-----AT---TT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30054  5 +    110024 T-----GT---TT
i Ellobius_lutescens.LOEQ01008920.1                      I 87 C 0
s Ellobius_talpinus.LOJH01026522.1                           12030  5 +     18970 T-----GT---TT
i Ellobius_talpinus.LOJH01026522.1                       I 88 C 0
s Enhydra_lutris.KZ291758.1                               24915127  5 +  41312741 T-----AT---TT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577859  5 +  14770903 T-----AT---TT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040087  5 -   4378816 T-----GT---TT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374011  5 +  39960074 T-----GT---TT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410797  5 -    498745 T-----GT---TT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3664493  1 +   7059049 ------------T
i Erinaceus_europaeus.JH835339.1                         I 1 C 0
s Erythrocebus_patas.Contig38                               261881  5 +  21539334 T-----CT---TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63940  5 -    133382 T-----AT---TT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4157  5 +      7672 T-----AT---TT
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13773  5 -     24895 T-----GT---TT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41482  5 -     70999 T-----GT---TT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85444  5 +    112731 T-----GT---TT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42013  5 +     68309 T-----GT---TT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52339  5 -     65740 T-----GT---TT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22968  5 -     75513 T-----GT---TT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47165  5 -     97555 T-----GT---TT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3890  5 +     30972 T-----GT---TT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41610  5 -     52037 T-----GT---TT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58012  5 -    111500 T-----GT---TT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245773  5 - 206538554 T-----TT---TT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115558  5 - 205367284 t-----tt---tt
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26659  5 -     30238 T-----TT---TT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123840  5 -    137831 T-----AT---TT
i Galago_moholi.ctg3793                                  I 2 C 0
s Galago_senegalensis.k141_991736                             7385  5 +     22493 T-----AT---TT
i Galago_senegalensis.k141_991736                        I 2 C 0
s Galagoides_demidoff.k141_561628                            19442  5 -     32986 T-----AT---TT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               18095  5 +     18121 T-----AT---TT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90292  5 -     95226 T-----AG---TT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33298  5 -     36801 T-----AT---TT
i Glis_glis.GliGli_scaffold_33859                        I 91 C 0
s Gorilla_beringei.k141_3358147                               4837  5 -      8343 T-----GT---TT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253849  5 - 186649187 T-----GT---TT
i Gorilla_gorilla.LT578341.1                             I 25 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     794  5 -     78134 T-----AT---TT
i Graphiurus_murinus.GraMur_scaffold_10447               I 90 C 0
s Hapalemur_alaotrensis.k141_330369                          13698  5 -     40692 T-----GT---TT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35100  5 +     49394 T-----GT---TT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59968  5 -     66874 T-----GT---TT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8842  5 -     42923 T-----GT---TT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15842  5 -     53142 T-----GT---TT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29802  5 -    327341 T-----TA---TC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8046  5 +     48891 T-----AT---TT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                5979  1 +      6687 G------------
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6650  5 -     36432 T-----AT---TT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49813  5 +     49977 T-----AT---CT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141857  5 -    630532 T-----GT---TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68719  5 +     83186 T-----TA---TT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70864  5 +    143317 T-----AT---TA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 353 C 0
s Hylobates_agilis.k141_1155965                               4892  5 +     12352 T-----GT---TT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12076  5 +     55766 T-----GT---TT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051674  5 + 191637585 T-----GT---TT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800552  5 +  11177569 T-----GT---TT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3502  5 -    135385 T-----AT---TT
i Hystrix_cristata.HysCri_scaffold_5660                  I 323 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385871  5 +   7955117 t-----aT---TT
i Ictidomys_tridecemlineatus.JH393364.1                  I 78 C 0
s Indri_indri.k141_2415743                                    1352  5 +     11955 T-----GT---TT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2177  5 -     16823 T-----AT---TT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238685  5 +   9596543 T-----AT---TT
i Jaculus_jaculus.JH725527.1                             I 188 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64656  5 -     97402 T-----AT---TT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42297  5 +    110728 T-----GT---TT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61719  5 -     65777 T-----AT---TT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758491  5 +  30322482 T-----GT---TT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3211  5 -     13097 T-----GT---TT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2965  5 +      5940 T-----GT---TT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2795  5 -      5717 T-----GT---TT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9171  5 -     11567 T-----GT---TT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10552  5 -     12945 T-----GT---TT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8020  5 +     29618 T-----GT---TC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8016  5 +     31569 T-----GT---TT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8026  5 +     24756 T-----GT---TT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8026  5 +     16388 T-----GT---TT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812541  5 -   3914936 T-----AT---TT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16868  5 +     24238 T-----AT---TT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333697  5 +    662738 T-----AT---TT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               332919  5 -   1826925 T-----CT---TT
i Lophocebus_aterrimus.ctg367                            I 932 C 0
s Loris_lydekkerianus.k141_2031736                            9603  5 +     19643 T-----AT---TT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043260  5 -   6120653 T-----AT---TT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080041  5 +  43346337 T-----AT---TT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613682  5 +  59628241 A-----GT---TT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44303  5 -     61512 T-----CT---TT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371965  5 -  60120075 T-----CT---TT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24228  5 +     30207 T-----CT---TT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21331  5 -     24934 T-----CT---TT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24181  5 +     30527 T-----CT---TT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35357  5 -     50087 T-----CT---TT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45101  5 +     51645 T-----CT---TT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414304  5 - 187317192 T-----CT---TT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398534  5 +  25927173 T-----CT---TT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47706  5 -     62418 T-----CT---TT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  244  5 +     14901 T-----CT---TT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44178  5 +     59329 T-----CT---TT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270086  5 +    668171 T-----CT---TT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  362  5 +      1732 T-----CT---TT
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1884  5 +     17132 T-----CT---TT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222251  5 -    270270 T-----AT---TT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321383  5 +  24302211 T-----CT---TT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356215  5 -    752769 T-----CT---TT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672571  5 -    737560 T-----AT---TT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219855  5 +    317179 T-----AT---TT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500091  5 +  40650429 t-----aT---TT
i Marmota_marmota.CZRN01000018.1                         I 77 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149410  5 +    207569 T-----AC---TT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25231  5 -     74585 T-----AT---TT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49180  5 -    140813 T-----AT---TT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 256 C 0
s Mesocricetus_auratus.KB708134.1                         17428306  5 +  29670104 T-----AT---TT
i Mesocricetus_auratus.KB708134.1                        I 69 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80241  5 +     93471 T-----AT---TT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9336  5 +     17804 T-----GT---TT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9838  5 -     12984 T-----GT---TT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18152  5 -     26561 T-----GT---TT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983629  5 +  93316391 T-----GT---TT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44805  4 +    145209 A------C---TC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184174  5 +    200668 C-----AC---TT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961492  5 +  27267610 T-----GT---TT
i Microtus_ochrogaster.CM001695.1                        I 113 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362277  5 -   8254450 T-----AT---TT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41178  5 -     48117 T-----AT---TT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21391  5 -     27822 T-----CT---TT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7549  5 +     27589 T-----AT---TT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51418  5 -     62432 T-----GT---TT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352133  5 +    437263 T-----AT---TT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178337  5 +    366855 C-----AT---TT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23341  5 -     82753 T-----GT---TT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17555  5 -     63510 T-----TA---TC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38217  5 +     47283 T-----AT---TT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592221  5 + 120012414 a-----at---aT
i Mus_caroli.LT608237.1                                  I 80 C 0
s Mus_musculus.chr8                                       41686606  5 + 129401213 a-----at---at
i Mus_musculus.chr8                                      I 93 C 0
s Mus_pahari.LT608297.1                                   58216463  5 +  89631738 a-----tt---aT
i Mus_pahari.LT608297.1                                  I 89 C 0
s Mus_spretus.CM004101.1                                  39495902  5 + 130317789 A-----AT---AT
i Mus_spretus.CM004101.1                                 I 81 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81901  5 -     86153 T-----AT---TT
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 114 C 0
s Mustela_putorius.JH418006.1                             14354163  5 +  14710649 T-----AT---TT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792467  5 +  10118263 T-----AT---TT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386627  5 +   6019432 T-----AT---TT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382446  5 +   4330536 T-----AT---TT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1274  5 +     18357 T-----AT---TT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118641  5 +    130748 T-----AT---TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945123  5 +   3037898 t-----at---tt
i Nannospalax_galili.KL204047.1                          I 65 C 0
s Nasalis_larvatus.k141_1350636                              28042  5 +     34575 T-----CT---TT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468144  5 -  31847680 T-----AT---TT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226302  5 -   7148211 T-----AT---TT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127041  8 -    149072 T-----ATTGTTT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52784  5 -    132029 T-----GT---TT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8879  5 -     16345 T-----GT---TT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14764  5 +     22201 T-----GT---TT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412985  5 -  22158432 T-----GT---TT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25162  5 -     54323 T-----GT---TT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197275  5 +   9404916 A-----GT---TT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635603  5 + 196305487 T-----AT---TT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2361  5 -      3937 T-----AT---TT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563868  5 - 199412804 T-----AT---TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550235  5 -   3988456 T-----AT---TT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053690  5 -  11899542 C-----AC---TT
i Octodon_degus.JH651603.1                               I 423 C 0
s Odobenus_rosmarus.KB229312.1                             1450740  5 +   2017862 T-----AT---TT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435177  5 -    630418 T-----AT---TT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13176  5 +    150152 T-----AT---TT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91828  5 -    140218 T-----GT---TT
i Ondatra_zibethicus.OndZib_scaffold_7387                I 90 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2722  5 -     41509 T-----AT---TT
i Onychomys_torridus.OnyTor_scaffold_28377               I 125 C 0
s Orcinus_orca.KB316932.1                                  8095572  5 +  10937097 T-----AT---TT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12680  5 -     14239 T-----AT---TT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102704  5 - 174332312 T-----AT---TT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38321  5 +    559221 A-----GT---TT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        38995 10 -     51505 TGTAGTAT---TT
i Otolemur_crassicaudatus.k141_649260                    I 2 C 0
s Otolemur_garnettii.GL873799.1                             351998 10 +   1103335 TGTAGTAT---TT
i Otolemur_garnettii.GL873799.1                          I 2 C 0
s Ovis_aries.CM001607.2                                   26403166  5 -  44047080 T-----AT---TT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3685  5 +     17875 T-----AT---TT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471878  5 - 189151597 T-----GT---TT
i Pan_troglodytes.CM009242.2                             I 25 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23484  5 -    230217 T-----TT---TT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460810  5 -  18783137 T-----TT---TT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971530  5 +   8748460 T-----TT---TT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614608  5 +   2937107 T-----AT---TT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242216  5 - 183742232 T-----CT---TT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8678  5 +     21308 T-----CT---TT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291252  5 -  20919399 T-----CT---TT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21326  5 -     27687 T-----CT---TT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14472  5 +     16796 T-----CT---TT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21283  5 -     23640 T-----CT---TT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14126  5 +     78924 T-----TT---TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         876  1 +      9367 T------------
i Perognathus_longimembris.PerPac_flattened_line_89005   I 200 C 0
s Peromyscus_maniculatus.KI615324.1                         245918  5 +  18517816 T-----AT---TT
i Peromyscus_maniculatus.KI615324.1                      I 100 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11427  5 -     15039 T-----AT---TT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1490  5 +     55023 T-----CT---TT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1040  5 -     89929 T-----CT---TT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1629  5 +     40849 T-----CT---TT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253293  5 +  14605196 T-----CT---TT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2800  5 +     22231 C-----AT---TT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63934  5 +    207309 T-----GT---TT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5027  5 -     25401 T-----GT---TT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30770  5 +     58159 T-----GT---TT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31046  5 +     63561 T-----GT---TT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30806  5 +     51148 T-----GT---TT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555776  5 -   4542175 T-----GT---TT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30790  5 +     51125 T-----GT---TT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3514  5 -      8168 T-----AT---TT
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7193  5 +     39866 T-----GT---TT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2277  5 -      9282 T-----GT---TT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41681  5 -     87950 T-----GT---TT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42075  5 -     88961 T-----GT---TT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6773  5 -     39403 T-----GT---TT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41724  5 +     87928 T-----GT---TT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6770  5 -     60166 T-----GT---TT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13707  5 -     67232 T-----GT---TT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41623  5 -     90634 T-----GT---TT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43090  5 +     89403 T-----GT---TT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177002  5 - 189387572 T-----GT---TT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191819  5 -   9816681 T-----GT---TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26625  5 +     69807 T-----CT---TT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43821  5 -     80239 T-----CT---TT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2365  1 +      3019 G------------
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981646  5 +   4620579 T-----GT---TT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565113  5 -   2598838 T-----GT---TT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2749  5 -      7103 T-----GT---TT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3346  5 -     11706 T-----GT---TT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7082  5 -     30655 T-----GT---TT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33407  5 +     46564 T-----GT---TT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93678  5 -     98465 T-----GT---TT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7315  5 +     35169 T-----GT---TT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36521  5 +     52041 T-----AT---TT
i Psammomys_obesus.NESX01036366.1                        I 190 C 0
s Pteronotus_parnellii.KE847780.1                            51220  5 -     66298 T-----AT---TT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3730  5 -     18639 T-----AT---TT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839937  5 -  28871421 T-----AT---TT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536446  5 -   4952924 T-----AT---TT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098124  5 +  38429054 T-----TT---TT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             25999  5 +     91421 T-----CT---TT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152491  5 -   7812017 T-----CT---TT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6866  5 +     72585 T-----CT---TT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52096  5 +     55069 T-----AT---TT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021819  5 -  90668790 t-----gt---tt
i Rattus_norvegicus.chr16                                I 100 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913831  5 +   3329780 T-----AT---TT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              571  5 +      7119 T-----CT---TT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121179  5 + 195417433 T-----CT---TT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235421  5 -   7961872 T-----CT---TT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73847  3 -    116970 -------T---TT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3073  5 +     27962 T-----GT---TT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2968  5 +      6077 T-----GT---TT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3059  5 +      5971 T-----GT---TT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2981  5 +      5932 T-----GT---TT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1323  5 -      4390 T-----GT---TT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390758  5 - 209938924 T-----GT---TT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2930  5 +      5979 T-----GT---TT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3692  5 -      4301 T-----GT---TT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6758  5 +     16473 T-----AT---TT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108099  5 + 121099817 T-----GT---TT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29660  5 -     47369 T-----GT---TT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30048  5 -     79414 T-----GT---TT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26739  5 -     34454 T-----GT---TT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14146  5 -     22428 T-----GT---TT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29292  5 -     47109 T-----GT---TT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237352  5 +   5703754 T-----GT---TT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6942  5 +     21866 T-----GT---TT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115048  5 +    313613 T-----AA---TT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24318  5 +     27374 T-----CT---TT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27832  5 +     58920 T-----CT---TT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14328  5 -     45317 T-----CT---TT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21987  5 -     42441 T-----CT---TT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24665  5 -     29113 T-----CT---TT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27739  5 -     48123 T-----GT---TT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48294  5 +     77746 T-----AT---TT
i Sigmodon_hispidus.SigHis_scaffold_20193                I 66 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857355  5 -   1910179 T-----AC---GT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867451  5 +   3870691 t-----aT---TT
i Spermophilus_dauricus.KZ294078.1                       I 79 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5719  5 -     97271 T-----AT---TT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123959  5 +    196729 T-----TA---TT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390246  5 +   1523678 T-----GT---TT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13204  5 +     22964 T-----AT---TT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1757  5 +      5583 T-----AT---TT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190651  5 +    199430 T-----AT---TT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104603  5 -    539355 T-----AT---TT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5939  5 +      6850 T-----AT---TT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5990  5 +     20590 T-----AT---TT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352202  5 - 186847797 T-----CT---TT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18862  5 -     31044 T-----AT---TT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479248  5 -    610378 T-----AT---TT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19864  5 +     26378 T-----CT---TT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32542  5 -     78344 T-----CT---TT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19189  5 +     25722 T-----CT---TT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27494  5 -     62838 T-----CT---TT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27540  5 +     46913 T-----CT---TT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8349  5 -     28527 T-----CT---TT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29431  5 -     64340 T-----CT---TT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27468  5 -     63452 T-----CT---TT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8913  5 +     22490 T-----CT---TT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2339  5 -      6147 T-----CT---TT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9244  5 -     13050 T-----CT---TT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254484  5 -   6242583 T-----CT---TT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         508  5 +     19340 T-----CT---TT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172372  5 -    200418 T-----AT---TT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479501  5 -  10818551 T-----AT---TT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832885  5 -   4065304 T-----GT---TT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360307  5 -  33153633 T-----AT---TT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    1509  5 -     21056 T-----GT---TC
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 1290
s Ursus_maritimus.KK499267.1                                180898  5 +   5085361 T-----AG---TT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24290  5 -     30710 T-----GT---TT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23197  5 -    147434 T-----GT---TT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75382  5 +   5488506 T-----TT---TT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104043  5 -    112863 A-----GT---TT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173230  5 -    224448 T-----AT---TT
i Xerus_inauris.XerIna_scaffold_2302                     I 84 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27936  5 -     86975 T-----AT---TT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       238  5 -       753 T-----AA---TT
i Zapus_hudsonius.ZapHud_scaffold_533409                 N 0 C 0
e Sorex_araneus.JH798187.1                                 4669981 82 +  18376816 I
e Crocidura_indochinensis.CroInd_scaffold_77846               6137 25 +     12657 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Cuniculus_paca.CunPac_flattened_line_7025                   3070 277 +     36344 I
e Perodicticus_potto.k141_1854441                            17301 503 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          24933 502 +     31479 I
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       7186  0 -     70247 C
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Daubentonia_madagascariensis.ctg71                        291593  0 +  12879189 C
e Cacajao_melanocephalus.k141_619699                         19669  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  19756  0 +     95584 C
e Cacajao_calvus.k141_89051                                  42230  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   6936  0 +     28062 C
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4540 1 +     36723 T
s Acinonyx_jubatus.LLWD01001279.1                           811868 1 +   1699592 T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     20057 1 +     63021 t
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 4131
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414397 1 +  29979442 T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214707 1 +    347723 T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17138 1 -     61208 T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46856 1 +     53615 T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42817 1 +     44087 T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15442 1 -     21945 T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17125 1 +     32033 T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71296 1 -     84148 T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43535 1 -     78289 T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42974 1 +     55831 T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41424 1 -     64179 T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23063 1 -     24835 T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40049 1 +     45454 T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45695 1 +     70886 T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7871 1 +     30854 T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32007 1 +     42133 T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584232 1 +   2318259 T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176211 1 -    412891 T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49331 1 -     68529 T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     250 1 +     17741 T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              875 1 -     15923 T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1150 1 -     16391 T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                710 1 -     17186 T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15094 1 -     32367 T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4490 1 -     15198 T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273758 1 +  21539123 T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9926 1 +     48076 T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5063 1 -     28759 T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32615 1 +     44353 T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47986 1 -     71267 T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22045 1 -     33135 T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5234 1 +     11645 T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5240 1 -     19611 T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956066 1 -  23207421 T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3275 1 -      4711 T
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85223 1 +    124022 T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20760 1 +    288883 T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355147 1 +  48749331 T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753715 1 +   1948126 T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543854 1 -  45695690 T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528878 1 -   4408762 T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Callibella_humilis.k141_1233062                             9232 1 +     18648 T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8771 1 -     13885 T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             839 1 -      8861 T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453232 1 + 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                754 1 +      8664 T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630053 1 +  17673402 T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664339 1 +   7040546 T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1207999 1 +   1652518 T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504418 1 +  60362399 T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8054 1 -     23171 T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221397 1 +   9314153 T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614532 1 +  59632846 T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106113 1 -  63665305 T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407944 1 -  46296322 T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590217 1 +  44709034 T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269320 1 +    496798 T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                425 1 -      1021 T
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26731 1 -     39886 T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78356 1 -    217609 T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           4150 1 -     12580 T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42208 1 +     53515 T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370139 1 -  26074798 T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7028 1 -     34880 T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66123 1 -     89041 T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1249 1 -      5494 T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491204 1 -  27778364 T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18037 1 +     27315 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140039 1 -   4669795 T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43781 1 +     47900 T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43608 1 -     44860 T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43594 1 -    148725 T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25811 1 -     40656 T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5777 1 +     20796 T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10854 1 -     17524 T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26576 1 -     34525 T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10397 1 -     25376 T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362997 1 -  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268709 1 +  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31043 1 -     45857 T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25982 1 -     32606 T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2141 1 +      8499 T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24539 1 +     70610 T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21468 1 +     36323 T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11835 1 -     19938 T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29652 1 -     33796 T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4169 1 -     15404 T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8030 1 -     32913 T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18443 1 -     40346 T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18698 1 +    216457 T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18491 1 +     39636 T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3080 1 +      5346 T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342359 1 +  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8906 1 -     44032 T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303683 1 - 135778131 T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13803 1 +     15858 T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605379 1 -    839153 T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408121 1 -   2368649 T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377996 1 - 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1545 1 -     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806259 1 +  53390261 T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1827 1 -      8242 C
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41308 1 -     83289 T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113765 1 - 224834208 C
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644041 1 -   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109179 1 -   2246927 t
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624395 1 -  35494412 T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864233 1 -  20541912 T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663495 1 -   1390856 T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138281 1 -    198055 T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            62853773 1 - 111700974 C
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5292 1 +     19438 T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238611 1 -    607251 T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107572 1 -  10337057 C
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30059 1 +    110024 T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12035 1 +     18970 T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915132 1 +  41312741 T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577864 1 +  14770903 T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040092 1 -   4378816 T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374016 1 +  39960074 T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410802 1 -    498745 T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3664494 1 +   7059049 t
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               261886 1 +  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63945 1 -    133382 T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4162 1 +      7672 T
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13778 1 -     24895 T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41487 1 -     70999 T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85449 1 +    112731 T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42018 1 +     68309 T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52344 1 -     65740 T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22973 1 -     75513 T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47170 1 -     97555 T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3895 1 +     30972 T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41615 1 -     52037 T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58017 1 -    111500 T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115563 1 - 205367284 t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26664 1 -     30238 T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123845 1 -    137831 T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7390 1 +     22493 T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19447 1 -     32986 T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               18100 1 +     18121 T
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90297 1 -     95226 T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33303 1 -     36801 T
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4842 1 -      8343 T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253854 1 - 186649187 T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     799 1 -     78134 T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13703 1 -     40692 T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35105 1 +     49394 T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59973 1 -     66874 T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8847 1 -     42923 T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15847 1 -     53142 T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29807 1 -    327341 T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8051 1 +     48891 T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6655 1 -     36432 T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49818 1 +     49977 C
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141862 1 -    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68724 1 +     83186 T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               4897 1 +     12352 T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12081 1 +     55766 T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051679 1 + 191637585 T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800557 1 +  11177569 T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385876 1 +   7955117 T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1357 1 +     11955 T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2182 1 -     16823 T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238690 1 +   9596543 T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64661 1 -     97402 T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42302 1 +    110728 T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61724 1 -     65777 T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758496 1 +  30322482 T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3216 1 -     13097 T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2970 1 +      5940 T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2800 1 -      5717 T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9176 1 -     11567 T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10557 1 -     12945 T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8025 1 +     29618 T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8021 1 +     31569 T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8031 1 +     24756 T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8031 1 +     16388 T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812546 1 -   3914936 T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16873 1 +     24238 T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333702 1 +    662738 T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               332924 1 -   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9608 1 +     19643 T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043265 1 -   6120653 T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080046 1 +  43346337 C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613687 1 +  59628241 T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44308 1 -     61512 T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371970 1 -  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24233 1 +     30207 T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21336 1 -     24934 T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24186 1 +     30527 T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35362 1 -     50087 T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45106 1 +     51645 T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414309 1 - 187317192 T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398539 1 +  25927173 T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47711 1 -     62418 T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  249 1 +     14901 T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44183 1 +     59329 T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270091 1 +    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  367 1 +      1732 T
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1889 1 +     17132 T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222256 1 -    270270 T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321388 1 +  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356220 1 -    752769 T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672576 1 -    737560 T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219860 1 +    317179 T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500096 1 +  40650429 T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149415 1 +    207569 T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25236 1 -     74585 T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49185 1 -    140813 T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428311 1 +  29670104 T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80246 1 +     93471 T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9341 1 +     17804 T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9843 1 -     12984 T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18157 1 -     26561 T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983634 1 +  93316391 T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44809 1 +    145209 C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184179 1 +    200668 T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961497 1 +  27267610 T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362282 1 -   8254450 T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41183 1 -     48117 T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21396 1 -     27822 T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7554 1 +     27589 T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51423 1 -     62432 T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352138 1 +    437263 T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178342 1 +    366855 T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23346 1 -     82753 T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17560 1 -     63510 T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38222 1 +     47283 T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592226 1 + 120012414 T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686611 1 + 129401213 T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216468 1 +  89631738 T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495907 1 + 130317789 T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81906 1 -     86153 T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354168 1 +  14710649 T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792472 1 +  10118263 T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386632 1 +   6019432 T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382451 1 +   4330536 T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1279 1 +     18357 T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118646 1 +    130748 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945128 1 +   3037898 t
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28047 1 +     34575 T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468149 1 -  31847680 T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226307 1 -   7148211 T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127049 1 -    149072 T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52789 1 -    132029 T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8884 1 -     16345 T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14769 1 +     22201 T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412990 1 -  22158432 T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25167 1 -     54323 T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197280 1 +   9404916 T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635608 1 + 196305487 T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2366 1 -      3937 T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563873 1 - 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550240 1 -   3988456 T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450745 1 +   2017862 T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435182 1 -    630418 T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13181 1 +    150152 T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91833 1 -    140218 T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2727 1 -     41509 T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095577 1 +  10937097 T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12685 1 -     14239 C
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102709 1 - 174332312 T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38326 1 +    559221 T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39005 1 -     51505 T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352008 1 +   1103335 T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403171 1 -  44047080 T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3690 1 +     17875 T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471883 1 - 189151597 T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23489 1 -    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460815 1 -  18783137 T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971535 1 +   8748460 T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614613 1 +   2937107 T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242221 1 - 183742232 T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8683 1 +     21308 T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291257 1 -  20919399 T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21331 1 -     27687 T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14477 1 +     16796 T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21288 1 -     23640 T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14131 1 +     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245923 1 +  18517816 T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11432 1 -     15039 T
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1495 1 +     55023 T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1045 1 -     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1634 1 +     40849 T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253298 1 +  14605196 T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2805 1 +     22231 T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63939 1 +    207309 T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5032 1 -     25401 T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30775 1 +     58159 T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31051 1 +     63561 T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30811 1 +     51148 T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555781 1 -   4542175 T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30795 1 +     51125 T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3519 1 -      8168 T
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7198 1 +     39866 T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2282 1 -      9282 T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41686 1 -     87950 T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42080 1 -     88961 T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6778 1 -     39403 T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41729 1 +     87928 T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6775 1 -     60166 T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13712 1 -     67232 T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41628 1 -     90634 T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43095 1 +     89403 T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177007 1 - 189387572 T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191824 1 -   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26630 1 +     69807 T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43826 1 -     80239 T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981651 1 +   4620579 T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565118 1 -   2598838 T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2754 1 -      7103 T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3351 1 -     11706 T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7087 1 -     30655 T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33412 1 +     46564 T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93683 1 -     98465 T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7320 1 +     35169 T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36526 1 +     52041 T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51225 1 -     66298 T
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3735 1 -     18639 T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839942 1 -  28871421 T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536451 1 -   4952924 T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098129 1 +  38429054 T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26004 1 +     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152496 1 -   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6871 1 +     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52101 1 +     55069 T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021824 1 -  90668790 t
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913836 1 +   3329780 T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              576 1 +      7119 T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121184 1 + 195417433 T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235426 1 -   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73850 1 -    116970 T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3078 1 +     27962 T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2973 1 +      6077 T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3064 1 +      5971 T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2986 1 +      5932 T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1328 1 -      4390 T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390763 1 - 209938924 T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2935 1 +      5979 T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3697 1 -      4301 T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6763 1 +     16473 T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108104 1 + 121099817 T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29665 1 -     47369 T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30053 1 -     79414 T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26744 1 -     34454 T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14151 1 -     22428 T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29297 1 -     47109 T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237357 1 +   5703754 T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6947 1 +     21866 T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115053 1 +    313613 T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24323 1 +     27374 T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27837 1 +     58920 T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14333 1 -     45317 T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21992 1 -     42441 T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24670 1 -     29113 T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27744 1 -     48123 T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48299 1 +     77746 T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857360 1 -   1910179 T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867456 1 +   3870691 T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5724 1 -     97271 T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123964 1 +    196729 T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390251 1 +   1523678 T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13209 1 +     22964 T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1762 1 +      5583 T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190656 1 +    199430 T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104608 1 -    539355 T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5944 1 +      6850 T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5995 1 +     20590 T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352207 1 - 186847797 T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18867 1 -     31044 T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479253 1 -    610378 T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19869 1 +     26378 T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32547 1 -     78344 T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19194 1 +     25722 T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27499 1 -     62838 T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27545 1 +     46913 T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8354 1 -     28527 T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29436 1 -     64340 T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27473 1 -     63452 T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8918 1 +     22490 T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2344 1 -      6147 T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9249 1 -     13050 T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254489 1 -   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         513 1 +     19340 T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172377 1 -    200418 G
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479506 1 -  10818551 C
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832890 1 -   4065304 T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360312 1 -  33153633 T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2804 1 -     21056 T
i Uropsilus_gracilis.UroGra_scaffold_46687               I 1290 C 0
s Ursus_maritimus.KK499267.1                                180903 1 +   5085361 T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24295 1 -     30710 T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23202 1 -    147434 T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75387 1 +   5488506 T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104048 1 -    112863 T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173235 1 -    224448 T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27941 1 -     86975 T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       243 1 -       753 T
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
e Sorex_araneus.JH798187.1                                 4669981 82 +  18376816 I
e Crocidura_indochinensis.CroInd_scaffold_77846               6137 25 +     12657 I
e Capromys_pilorides.CapPil_scaffold_652123                    567 0 -      1880 C
e Chinchilla_lanigera.JH722012.1                           1237900 0 -   2543920 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            27147 0 +     75252 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005         877 0 +      9367 C
e Octodon_degus.JH651603.1                                11053695 0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70869 0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  9408 0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   4480 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18949545 0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    97890 0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   3070 277 +     36344 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  16876 0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       61987 0 -     66877 C
e Cavia_porcellus.DS562891.1                               4998906 0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4995464 0 +  23392119 C
e Perodicticus_potto.k141_1854441                            17301 503 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          24933 502 +     31479 I
e Arctocebus_calabarensis.k141_1364444                       18647 1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       7186 0 -     70247 C
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Procavia_capensis.ProCapCap_scaffold_255930                 2366 0 +      3019 C
e Hystrix_cristata.HysCri_scaffold_5660                       3507 0 -    135385 C
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Heterohyrax_brucei.HetBruBak_scaffold_128297                5980 0 +      6687 C
e Daubentonia_madagascariensis.ctg71                        291593 0 +  12879189 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              3325 0 +     87169 C
e Chiropotes_sagulatus.k141_1113111                           7142 0 +     34062 C
e Chiropotes_israelita.k141_313004                           41571 0 -    112038 C
e Cacajao_melanocephalus.k141_619699                         19669 0 +    119600 C
e Cacajao_hosomi.k141_81245                                  19756 0 +     95584 C
e Cacajao_calvus.k141_89051                                  42230 0 -     91139 C
e Cacajao_ayresi.k141_96119                                   6936 0 +     28062 C
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4541 10 +     36723 C----ACTA------G--T--T--AT
s Acinonyx_jubatus.LLWD01001279.1                           811869 10 +   1699592 C----ACTA------A--T--T--AT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24189 10 +     63021 c----tc--t---c-c--t--t--ac
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 4131 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414398 10 +  29979442 C----ACTA------G--T--T--AT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214708 10 +    347723 C----ATGA------G--T--T--AT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17139  3 -     61208 C----AC-------------------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   46857 10 +     53615 C----ACTA------G--T--T--AT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42818 10 +     44087 C----ACTA------G--T--T--AT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15443 10 -     21945 C----ACTA------G--T--T--AT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17126 10 +     32033 C----ACTA------G--T--T--AT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71297 10 -     84148 C----AATA------G--T--T--AT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43536 10 -     78289 C----AATA------G--T--T--AT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42975 10 +     55831 C----AATA------G--T--T--AT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41425 10 -     64179 C----AATA------G--T--T--AT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23064 10 -     24835 C----AATA------G--T--T--AT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40050 10 +     45454 C----AATA------G--T--T--AT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45696 10 +     70886 C----AATA------G--T--T--AT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7872 10 +     30854 C----AATA------G--T--T--AT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32008 10 +     42133 C----AATA------G--T--T--AT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584233 10 +   2318259 C----ACTA------G--T--T--TT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176212 10 -    412891 T----ACTA------G--T--T--AT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49332 10 -     68529 C----ACTA------G--T--T--TT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     251 10 +     17741 C----AATA------G--T--T--AT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              876 10 -     15923 C----AATA------G--T--T--AT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1151 10 -     16391 C----AATA------G--T--T--AT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                711 10 -     17186 C----AATA------G--T--T--AT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15095 10 -     32367 C----AC------TAA--T--T--AC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4491 10 -     15198 G----ACTA------G--T--C--AT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273759 10 +  21539123 C----AGTA------G--T--T--AT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9927 10 +     48076 C----AGTA------G--T--T--AT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5064 10 -     28759 C----AATA------G--T--T--AT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32616 10 +     44353 C----AGTA------G--T--T--AT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47987 10 -     71267 C----AGTA------G--T--T--AT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22046 10 -     33135 C----AGTA------G--T--T--AT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5235 10 +     11645 T----CCTA------G--T--C--CT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5241 10 -     19611 T----CCTA------G--T--C--CT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956067 10 -  23207421 C----ACTA------G--T--T--TT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3276 10 -      4711 T----ACTA------G--T--T--TT
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85224 10 +    124022 C----ACTA------G--T--T--TT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20761 10 +    288883 C----ACTA------G--T--T--TT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355148 10 +  48749331 N----ACTA------G--T--T--TT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753716 10 +   1948126 C----ACTA------G--T--T--TT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543855 10 -  45695690 T----ACTA------G--T--T--TT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528879 10 -   4408762 C----ACTA------G--T--T--TT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6936  7 +     28062 -------TA------G--T--T--AT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42230  7 -     91139 -------TA------G--T--T--AT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19756  7 +     95584 -------TA------G--T--T--AT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19669  7 +    119600 -------TA------G--T--T--AT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9233 10 +     18648 C----AATA------G--A--T--AT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8772 10 -     13885 C----AATA------G--T--T--AT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             840  9 -      8861 C----AGTA------C--T--C--A-
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453233  9 + 189096842 C----AGTA------C--T--C--A-
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                755  9 +      8664 C----AGTA------C--T--C--A-
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630054 10 +  17673402 C----ACTA------G--T--T--AT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664340 10 +   7040546 C----ACTA------G--T--T--AT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208000 10 +   1652518 C----ACTA------G--T--T--AT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504419 10 +  60362399 C----ACTA------C--T--T--AC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8055 10 -     23171 C----ACTA------C--T--T--AC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221398 10 +   9314153 C----ACTA------C--T--T--AC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614533 10 +  59632846 C----ACTA------C--T--T--AC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106114 10 -  63665305 C----ACTA------C--T--T--AC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407945 10 -  46296322 C----ACTA------G--T--T--TT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590218 10 +  44709034 C----ACTA------G--T--T--TT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    567  8 -      1880 A----AC--------A--T--T--AC
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269321 10 +    496798 C----ACTA------G--T--T--AT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                426 10 -      1021 T----ACTA------G--T--T--AT
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26732 14 -     39886 CTTTCAC------TAG--T--T--AC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78357 10 -    217609 C----ACAA------G--T--T--AT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995464  8 +  23392119 A----GC--------A--T--T--AC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998906  8 +  23407841 A----GC--------A--T--T--AC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61987  8 -     66877 A----GC--------A--T--T--AC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4151 10 -     12580 C----AATA------G--A--T--AT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42209 10 +     53515 C----AATA------G--A--T--AT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370140 10 -  26074798 C----AAAA------G--T--T--AT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7029 10 -     34880 C----AAAA------G--T--T--AT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66124 10 -     89041 C----AAAA------G--T--T--AT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1250 10 -      5494 C----ACTA------G--T--T--AT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491205 10 -  27778364 C----ACTA------G--T--T--GT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18038 10 +     27315 C----ACTA------G--T--T--GT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140040 10 -   4669795 C----ACTA------G--T--T--AT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43782 10 +     47900 C----ACTA------G--T--T--AT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43609 10 -     44860 C----ACTA------G--T--T--AT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43595 10 -    148725 C----ACTA------G--T--T--AT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25812 10 -     40656 C----ACTA------G--T--T--AT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5778 10 +     20796 C----ACTA------G--T--T--AT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10855 10 -     17524 C----ACTA------G--T--T--AT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26577 10 -     34525 C----ACTA------G--T--T--AT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10398 10 -     25376 C----ACTA------G--T--T--AT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  362998 10 -  39242232 C----ACTA------G--T--T--AT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268710 10 +  21565898 C----ACTA------G--T--T--AT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31044 10 -     45857 C----ACTA------G--T--T--AT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25983 10 -     32606 C----ACTA------G--T--T--AT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2142 10 +      8499 C----ACTA------G--T--T--AT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24540 10 +     70610 C----ACTA------G--T--T--AT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21469 10 +     36323 C----ACTA------G--T--T--AT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11836 10 -     19938 A----ACCA------G--C--T--AT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29653 10 -     33796 T----CCTA------G--T--C--CT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4170 10 -     15404 T----CCTA------G--T--C--CT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8031 10 -     32913 T----AATA------G--T--T--AT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18444 10 -     40346 T----AATA------G--T--T--AT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18699 10 +    216457 T----AATA------G--T--T--AT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18492 10 +     39636 T----AATA------G--T--T--AT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237900  8 -   2543920 A----GC--------A--T--T--Ac
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3081 10 +      5346 C----AATA------G--T--T--AT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41571  3 -    112038 ---------------------T--AT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7142  3 +     34062 ---------------------T--AT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342360 10 +  18827391 C----ACTA------G--T--T--AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8907 10 -     44032 C----ACTA------G--T--T--AT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303684 10 - 135778131 C----ACTA------G--T--T--AT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13804 10 +     15858 C----ACTA------T--A--C--AT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605380 10 -    839153 C----ACTA------T--A--C--AT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408122 10 -   2368649 C----ACTA------G--T--T--AT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      377997 10 - 200372422 C----ACTA------G--T--T--AT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1546 10 -     84244 C----ACTA------G--T--T--AT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806260 10 +  53390261 T----ATGA------G--T--G--AT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1828 10 -      8242 C----TTTA------G--T--T--AT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41309 10 -     83289 C----AC------TAG--T--T--AT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113766 10 - 224834208 T----GC------TAG--T--T--AT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3325  6 +     87169 --------A------A--T--T--AT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644042  8 -   1526836 C----AT--------A--T--T--AC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16876  8 +     50838 A----GC--------A--C--T--AT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3347  7 +     36344 -----GC--------A--T--T--AC
i Cuniculus_paca.CunPac_flattened_line_7025              I 277 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27147  8 +     75252 A----GC--------A--T--T--AC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109180 10 -   2246927 a----acta------g--C--T--AC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624396 10 -  35494412 C----ATTA------G--T--T--TT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864234 10 -  20541912 T----ACTA------G--T--T--AT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663496 10 -   1390856 C----ACTA------G--T--T--GT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138282 10 -    198055 C----ACTA------G--T--T--GT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97890  8 -    115145 A----GC--------A--T--T--AC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9408  8 +     14636 A----GC--------A--T--T--AT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853774  4 - 111700974 T------GA------G----------
i Echinops_telfairi.JH980293.1                           C 0 I 1
s Eidolon_helvum.AWHC01266696.1                               5293 10 +     19438 C----ACTG------G--T--T--AT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238612 10 -    607251 C----ACTA------G--G--T--TT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107573 10 -  10337057 T----ATGA------G--C--T--AA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12036 10 +     18970 C----AC------TAG--T--T--TT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915133 10 +  41312741 C----ACTA------G--T--T--AT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577865 10 +  14770903 C----ATCA------G--T--T--AT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040093 10 -   4378816 C----ACTA------G--T--T--GT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374017 10 +  39960074 C----ACTA------G--T--T--GT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410803 10 -    498745 C----ACTA------G--T--T--GT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3664495 10 +   7059049 c----acta------g--t--t--at
i Erinaceus_europaeus.JH835339.1                         C 0 I 360
s Erythrocebus_patas.Contig38                               261887 10 +  21539334 C----ACTA------G--T--T--AT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63946 10 -    133382 C----ACTA------G--T--T--TT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4163 10 +      7672 C----ACTA------G--T--T--TT
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13779 10 -     24895 T----CCTA------G--T--C--AT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41488 10 -     70999 T----CCTA------G--T--C--AT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85450 10 +    112731 T----CCTA------G--T--C--AT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42019 10 +     68309 T----CCTA------G--T--C--AT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52345 10 -     65740 T----CCTA------G--T--C--AT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22974 10 -     75513 T----CCTA------G--T--C--AT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47171 10 -     97555 T----CCTA------G--T--C--AT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3896 10 +     30972 T----CCTA------G--T--C--AT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41616 10 -     52037 T----CCTA------G--T--C--AT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58018 10 -    111500 T----CCTA------G--T--C--AT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245778 10 - 206538554 C----CCTA------A--T--T--AT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115564 10 - 205367284 c----ccta------a--t--t--at
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26665 10 -     30238 C----ACTG------A--T--T--AT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123846 10 -    137831 G----GGGA------G--T--T--AT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7391 10 +     22493 G----GGGA------G--T--T--AT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19448 10 -     32986 G----GGGA------G--T--T--AC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               18101 10 +     18121 C----ACTA------G--T--T--AT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90298 10 -     95226 C----ACTA------G--T--T--TT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33304 10 -     36801 C----AC------TAG--T--T--AC
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4843 10 -      8343 C----ACTA------G--T--T--AT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253855 10 - 186649187 C----ACTA------G--T--T--AT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     800 10 -     78134 C----AC------TAG--T--T--AC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13704 10 -     40692 T----CTTA------G--T--C--AT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35106 10 +     49394 T----CTTA------G--T--C--AT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59974 10 -     66874 T----CTTA------G--T--C--AT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8848 10 -     42923 T----CTTA------G--T--C--AT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15848 10 -     53142 T----CTTA------G--T--C--AT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29808 10 -    327341 C----ACTA------A--T--T--AT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8052 10 +     48891 C----ACTA------G--T--T--TT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                5980  3 +      6687 ---------------------T--AT
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6656 10 -     36432 C----ACTA------G--T--T--TT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49819 10 +     49977 C----TCTA------G--A--T--AT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141863 10 -    630532 C----ACTA------G--T--T--AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68725 10 +     83186 C----ACTG------A--T--T--AT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70869  8 +    143317 A----GC--------A--T--T--AC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4898 10 +     12352 C----ACTA------G--T--T--AT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12082 10 +     55766 C----ACTA------G--T--T--AT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051680 10 + 191637585 C----ACTA------G--T--T--AT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800558 10 +  11177569 C----ACTA------G--T--T--AT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3507  8 -    135385 C----AC--------A--T--T--AC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385877 10 +   7955117 C----AC------CAG--T--T--AC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1358 10 +     11955 T----CCTA------G--T--G--CT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2183 10 -     16823 C----ACTA------G--T--T--TT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238691  6 +   9596543 C----AC------TAG----------
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_3970                 64662 10 -     97402 C----ACTA------G--T--T--TT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42303 10 +    110728 C----AATA------G--T--T--AT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61725 10 -     65777 C----ATCA------G--G--T--AT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758497 10 +  30322482 T----CTTA------G--T--C--GT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3217 10 -     13097 C----AATA------G--T--T--AT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2971 10 +      5940 C----AATA------G--T--T--AT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2801 10 -      5717 C----AATA------G--T--T--AT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9177 10 -     11567 C----AATA------G--T--T--GT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10558 10 -     12945 C----AATA------G--T--T--GT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8026 10 +     29618 T----CCTA------G--T--C--AT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8022 10 +     31569 T----CCTA------G--T--C--AT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8032 10 +     24756 T----CCCA------G--T--C--AT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8032 10 +     16388 T----CCTA------G--T--C--AT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812547 10 -   3914936 C----ACTA------G--T--T--AT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16874 10 +     24238 C----ACTA------G--T--T--AT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333703 10 +    662738 C----ACTA------G--T--T--TT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               332925 10 -   1826925 C----ACTA------G--T--T--AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9609 10 +     19643 G----GGGA------G--T--T--AT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043266 10 -   6120653 G----GGGA------G--T--T--AT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080047 10 +  43346337 T----ATGC------A--T--G--AT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613688 10 +  59628241 C----ACTA------C--T--T--AC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44309 10 -     61512 C----ACTA------G--T--T--AT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371971 10 -  60120075 C----ACTA------G--T--T--AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24234 10 +     30207 C----ACTA------G--T--T--AT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21337 10 -     24934 C----ACTA------G--T--T--AT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24187 10 +     30527 C----ACTA------G--T--T--AT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35363 10 -     50087 C----ACTA------G--T--T--AT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45107 10 +     51645 C----ACTA------G--T--T--AT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414310 10 - 187317192 C----ACTA------G--T--T--AT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398540 10 +  25927173 C----ACTA------G--T--T--AT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47712 10 -     62418 C----ACTA------G--T--T--AT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  250 10 +     14901 C----ACTA------G--T--T--AT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44184 10 +     59329 C----ACTA------G--T--T--AT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270092 10 +    668171 C----ACTA------G--T--T--AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  368 10 +      1732 C----ACTA------G--T--T--AT
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1890 10 +     17132 C----ACTA------G--T--T--AT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222257 10 -    270270 C----ACTG------G--T--T--AT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321389 10 +  24302211 C----ACTA------G--T--T--AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356221 10 -    752769 C----ACTA------G--T--T--AT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672577 10 -    737560 C----ACTA------G--C--T--AT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219861 10 +    317179 C----ACTA------G--C--T--AT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500097 10 +  40650429 C----AC------CAG--T--T--AC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149416 10 +    207569 A----TGTA------G--T--T--AT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25237 10 -     74585 C----ACTA------G--T--T--AT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49186 10 -    140813 C----AC------TCC--C--T--AT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80247 10 +     93471 C----ACTA------T--T--T--TT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9342 10 +     17804 C----AATA------G--A--T--AT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9844 10 -     12984 C----AATA------G--A--T--AT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18158 10 -     26561 C----AATA------G--A--T--AT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983635 10 +  93316391 T----CCTA------G--T--C--CT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44810  4 +    145209 C------GA------G----------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_2233                184180 10 +    200668 T----ACTA------G--T--T--AT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961498 10 +  27267610 C----AC------TAG--T--T--AT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362283 10 -   8254450 C----TCTA------G--T--T--AT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41184 10 -     48117 C----TCTA------G--T--T--AT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21397 10 -     27822 C----ACTA------G--T--T--AT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7555 10 +     27589 C----ACTA------G--T--T--AT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51424 10 -     62432 T----CCTA------G--T--C--TT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352139 10 +    437263 C----ATTA------G--T--T--TT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178343 10 +    366855 T----ACTC------G--T--T--AT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23347 10 -     82753 C----ACTA------G--T--T--TT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17561 10 -     63510 C----ACTA------A--T--T--AT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38223 10 +     47283 C----ATTA------G--T--T--AT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592227 10 + 120012414 C----AC------TCC--T--T--AT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686612 10 + 129401213 C----CC------TCC--T--T--AT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216469 10 +  89631738 C----CC------TCC--T--T--AT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495908 10 + 130317789 C----CC------TCC--T--T--AT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81907 10 -     86153 C----AC------TAC--T--T--AC
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354169  5 +  14710649 T----ACTA-----------------
i Mustela_putorius.JH418006.1                            C 0 I 3
s Myotis_brandtii.KE162005.1                               9792473 10 +  10118263 C----ATTA------G--T--T--AT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386633 10 +   6019432 C----ATTA------G--G--T--AT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382452 10 +   4330536 C----ATTA------G--T--T--AT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1280 10 +     18357 C----ATTA------G--G--T--AT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118647 10 +    130748 C----ACTA------G--C--T--AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945129 14 +   3037898 t----at--tatgcaa--A--T--AT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28048 10 +     34575 C----ACTA------G--T--T--AC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468150 10 -  31847680 C----ACTA------G--T--T--AT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226308 10 -   7148211 C----ACTA------G--T--T--TT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127050 10 -    149072 T----ACTA------G--T--T--AT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52790 10 -    132029 C----ACTA------G--T--T--AT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8885 10 -     16345 C----ACTA------G--T--T--AT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14770 10 +     22201 C----ACTA------G--T--T--AT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8412991 10 -  22158432 C----ACTA------G--T--T--AT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25168 10 -     54323 C----ACTA------G--T--T--AT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197281 10 +   9404916 C----ACTA------C--T--T--AT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635609 10 + 196305487 G----GGGA------G--T--T--AT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2367 10 -      3937 G----GGGA------G--T--T--AT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563874 10 - 199412804 G----GGGA------G--T--T--AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550241 10 -   3988456 C----TCTG------G--T--T--AT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053695  8 -  11899542 A----GC--------A--T--T--AT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450746 10 +   2017862 C----ACTA------G--T--T--AT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435183 10 -    630418 C----ATTA------G--T--T--TT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13182 10 +    150152 C----ACTA------G--T--T--TT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91834 10 -    140218 C----AC------TAG--T--T--AG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2728 10 -     41509 T----AC------TCA--T--T--AT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095578 10 +  10937097 C----ACTA------G--T--T--TT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12686 10 -     14239 T----ATGA------G--T--T--AT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102710 10 - 174332312 C----ACTA------G--T--T--AT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38327 10 +    559221 C----ACTT------C--T--T--AT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39006 10 -     51505 G----GGAA------G--T--T--AT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352009 10 +   1103335 G----GGGA------G--T--T--AT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403172 10 -  44047080 C----ACTA------G--T--T--TT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3691 10 +     17875 C----ACTC------G--T--T--TT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471884 10 - 189151597 C----ACTA------G--T--T--AT
i Pan_troglodytes.CM009242.2                             C 0 I 8
s Panthera_onca.PanOnc_flattened_line_3271                   23490 10 -    230217 C----ACTA------A--T--T--AT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460816 10 -  18783137 C----ACTA------A--T--T--AT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971536 10 +   8748460 C----ACTA------A--T--T--AT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614614 10 +   2937107 C----ACTA------G--T--T--TT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242222 10 - 183742232 C----ACTA------G--T--T--AT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8684 10 +     21308 C----ACTA------G--T--T--AT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291258 10 -  20919399 C----ACTA------G--T--T--AT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21332 10 -     27687 C----ACTA------G--T--T--AT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14478 10 +     16796 C----ACTA------G--T--T--AT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21289 10 -     23640 C----ACTA------G--T--T--AT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14132 10 +     78924 C----ACTA------A--T--T--AT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245924 10 +  18517816 C----AC------TCA--T--T--AT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11433 10 -     15039 C----ACTC------G--T--T--TT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1496 10 +     55023 C----ACTA------G--T--T--AT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1046 10 -     89929 C----TCTA------G--T--T--AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1635 10 +     40849 C----TCTA------G--T--T--AT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253299 10 +  14605196 C----ACTA------G--T--T--AT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2806 10 +     22231 C----ATCA------G--T--T--AT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63940 10 +    207309 C----AATA------G--T--T--AT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5033 10 -     25401 C----AATA------G--T--T--AT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30776 10 +     58159 C----AATA------G--T--T--AT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31052 10 +     63561 C----AATA------G--T--T--AT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30812 10 +     51148 C----AATA------G--T--T--AT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555782 10 -   4542175 C----AATA------G--T--T--AT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30796 10 +     51125 C----AATA------G--T--T--AT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3520 10 -      8168 C----ACTA------G--T--T--TT
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7199 10 +     39866 T----AATA------G--T--T--AT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2283 10 -      9282 T----AATA------G--T--T--AT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41687 10 -     87950 T----AATA------G--T--T--AT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42081 10 -     88961 T----AATA------G--T--T--AT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6779 10 -     39403 T----AATA------G--T--T--AT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41730 10 +     87928 T----AATA------G--T--T--AT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6776 10 -     60166 T----AATA------G--T--T--AT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13713 10 -     67232 T----AATA------G--T--T--AT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41629 10 -     90634 T----AATA------G--T--T--AT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43096 10 +     89403 T----AATA------G--T--T--AT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177008 10 - 189387572 C----ACTA------G--T--T--AT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191825 10 -   9816681 C----ACTA------G--T--T--AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26631 10 +     69807 C----ACTA------G--T--T--AT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43827 10 -     80239 C----ACTA------G--T--T--AT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2366  3 +      3019 ---------------------T--AT
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981652 10 +   4620579 T----CTTA------G--T--C--AT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565119 10 -   2598838 T----CCTA------G--T--C--CT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2755 10 -      7103 T----CCTA------G--T--C--CT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3352 10 -     11706 T----CCTA------G--T--C--CT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7088 10 -     30655 T----CCTA------G--T--C--CT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33413 10 +     46564 T----CCTA------G--T--C--CT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93684 10 -     98465 T----CCTA------G--T--C--CT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7321 10 +     35169 T----CCTA------G--T--C--CT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36527 10 +     52041 C----AC------TCT--C--T--AT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51226 10 -     66298 C----ACTA------G--T--T--AT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3736 10 -     18639 C----ACTA------G--T--T--AT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839943 10 -  28871421 C----ACTG------G--T--T--AT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536452 10 -   4952924 C----ACTG------G--T--T--AT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098130 10 +  38429054 C----ACTA------A--T--T--AT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26005 10 +     91421 C----ACTA------G--T--T--AT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152497 10 -   7812017 C----ACTA------G--T--T--AT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6872 10 +     72585 C----ACTA------G--T--T--AT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52102 10 +     55069 C----ACTA------G--T--T--TT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021825 10 -  90668790 c----at--t-t---c--t--t--at
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913837 10 +   3329780 C----ACTA------G--T--T--AT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              577 10 +      7119 C----ACTA------G--T--T--AT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121185 10 + 195417433 C----ACTA------G--T--T--AT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235427 10 -   7961872 C----ACTA------G--T--T--AT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73851 10 -    116970 C----ACTA------G--T--T--AT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3079 10 +     27962 C----AATA------G--T--T--AT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2974 10 +      6077 C----AATA------G--T--T--AT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3065 10 +      5971 C----AATA------G--T--T--AT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2987 10 +      5932 C----AATA------G--T--T--AT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1329 10 -      4390 C----AATA------G--T--T--AT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390764 10 - 209938924 C----AATA------G--T--T--AT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2936 10 +      5979 C----AATA------G--T--T--AT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3698 10 -      4301 C----AATA------G--T--T--AT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6764 10 +     16473 C----ACTA------G--T--T--TT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108105 10 + 121099817 C----AATA------A--T--T--AT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29666 12 -     47369 C----AATA------A--T--TTTAT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30054 10 -     79414 C----AATA------A--T--T--AT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26745 10 -     34454 C----AATA------A--T--T--AT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14152 10 -     22428 C----AATA------A--T--T--AT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29298 12 -     47109 C----AATA------ATTT--T--AT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237358 10 +   5703754 C----AATA------G--T--T--AT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6948 10 +     21866 C----AATA------G--T--T--AT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115054 10 +    313613 C----ACTA------G--T--T--AT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24324 10 +     27374 C----ACTA------G--T--T--AT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27838 10 +     58920 C----ACTA------G--T--T--AT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14334 10 -     45317 C----ACTA------G--T--T--AT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            21993 10 -     42441 C----ACTA------G--T--T--AT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24671 10 -     29113 C----ACTA------G--T--T--AT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27745 10 -     48123 C----ACTA------G--T--T--AT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48300 10 +     77746 C----TC------TAT--T--T--AT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857361 10 -   1910179 C----ACTG------G--T--T--TT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867457 10 +   3870691 C----AC------CAG--T--T--AC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5725 10 -     97271 C----ACTA------G--T--T--AT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123965 10 +    196729 C----ACTA------A--T--T--AT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390252 10 +   1523678 C----ACTA------G--T--T--AT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13210 10 +     22964 C----ACTA------G--T--T--AT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1763 10 +      5583 C----ACTA------G--C--T--AT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190657 12 +    199430 C----ACTA------G--CATT--TT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104609 12 -    539355 C----ACTA------G--CATT--TT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5945 10 +      6850 C----ACTA------G--T--T--AT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                5996 10 +     20590 C----ACTA------G--T--T--AT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352208 10 - 186847797 C----ACTA------G--T--T--AT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18868 10 -     31044 A----ACTA------G--C--T--AT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479254 10 -    610378 T----ACTG------G--T--T--AT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19870 10 +     26378 C----ACTA------G--T--T--AT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32548 10 -     78344 C----ACTA------G--T--T--AT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19195 10 +     25722 C----ACTA------G--T--T--AT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27500 10 -     62838 C----ACTA------G--T--T--AT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27546 10 +     46913 C----ACTA------G--T--T--AT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8355 10 -     28527 C----ACTA------G--T--T--AT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29437 10 -     64340 C----ACTA------G--T--T--AT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27474 10 -     63452 C----ACTA------G--T--T--AT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8919 10 +     22490 C----ACTA------G--T--T--AT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2345 10 -      6147 C----ACTA------G--T--T--AT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9250 10 -     13050 C----ACTA------G--T--T--AT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254490 10 -   6242583 C----ACTA------G--T--T--AT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         514 10 +     19340 C----ACTA------G--T--T--AT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172378 10 -    200418 C----ACTG------A--T--T--TT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479507 10 -  10818551 T----ATGC------A--T--T--AT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832891 10 -   4065304 C----ATTA------G--T--T--GT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360313 10 -  33153633 C----ACTA------G--T--T--TT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2805 10 -     21056 C----AATA------G--T--T--AT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180904 10 +   5085361 C----ATTA------G--T--T--AT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24296 10 -     30710 T----CCTA------G--T--C--AT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23203 10 -    147434 T----CCTA------G--T--C--AT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75388 10 +   5488506 C----ACTA------G--T--T--AT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104049 10 -    112863 C----ACTA------C--T--T--AT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173236 10 -    224448 C----AC------TAG--T--T--AC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27942 10 -     86975 C----ACTA------G--T--T--AT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       244  6 -       753 C----TC------TAG----------
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 I 3
e Sorex_araneus.JH798187.1                                 4669981 82 +  18376816 I
e Crocidura_indochinensis.CroInd_scaffold_77846               6137 25 +     12657 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005         877  0 +      9367 C
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   4480  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18949545  0 -  37912305 C
e Perodicticus_potto.k141_1854441                            17301 503 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          24933 502 +     31479 I
e Arctocebus_calabarensis.k141_1364444                       18647  1 -     45910 I
e Tupaia_tana.TupTan_flattened_line_394                       7186  0 -     70247 C
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Mesocricetus_auratus.KB708134.1                         17428312  0 +  29670104 C
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Ellobius_lutescens.LOEQ01008920.1                          30060  0 +    110024 C
e Daubentonia_madagascariensis.ctg71                        291593  0 +  12879189 C
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4551  8 +     36723 CAGCA-T--------------------CT
s Acinonyx_jubatus.LLWD01001279.1                           811879  8 +   1699592 TAGCA-T--------------------CT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24199  8 +     63021 ttgCC-T--------------------CT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414408  8 +  29979442 CAACA-T--------------------CT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214718  8 +    347723 CAACA-C--------------------CT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17143  9 -     61208 ATTGCAT--------------------CT
i Allactaga_bullata.AllBul_scaffold_20030                I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46867  8 +     53615 CAGTA-T--------------------CT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42828  8 +     44087 CAGTA-T--------------------CT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15453  8 -     21945 CAGTA-T--------------------CT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17136  8 +     32033 CAGTA-T--------------------CT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71307  8 -     84148 CAGTA-T--------------------CT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43546  8 -     78289 CAGTA-T--------------------CT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42985  8 +     55831 CAGTA-T--------------------CT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41435  8 -     64179 CAGTA-T--------------------CT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23074  8 -     24835 CAGTA-T--------------------CT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40060  8 +     45454 CAGTA-T--------------------CT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45706  8 +     70886 CAGTA-T--------------------CT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7882  8 +     30854 CAGTA-T--------------------CT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32018  8 +     42133 CAGTA-T--------------------CT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584243  8 +   2318259 CAGTA-T--------------------TG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176222  8 -    412891 CAGTA-T--------------------CT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49342  8 -     68529 CAGTA-T--------------------TG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     261  8 +     17741 CAGTA-T--------------------CT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              886  8 -     15923 CAGTA-T--------------------CT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1161  8 -     16391 CAGTA-T--------------------CT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                721  8 -     17186 CAGTA-T--------------------CT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15105  8 -     32367 CTGCA-T--------------------CT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18648  2 -     45910 ---------------------------CT
i Arctocebus_calabarensis.k141_1364444                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4501  8 -     15198 CAGCA-T--------------------CT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273769  8 +  21539123 CAGTG-T--------------------CT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9937  8 +     48076 CAGTG-T--------------------CT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5074  8 -     28759 CAGTA-T--------------------CT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32626  8 +     44353 CAGTG-T--------------------CT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              47997  8 -     71267 CAGTG-T--------------------CT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22056  8 -     33135 CAGTA-T--------------------CT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5245  8 +     11645 CAGCA-G--------------------CT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5251  8 -     19611 CAGCA-G--------------------CT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956077  8 -  23207421 CAGCA-T--------------------TG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3286  8 -      4711 CAGCA-T--------------------TG
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85234  8 +    124022 CAGTA-T--------------------TG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20771  8 +    288883 CAGTA-T--------------------TG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355158  8 +  48749331 CAGTA-T--------------------TN
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753726  8 +   1948126 CAGTA-T--------------------TG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543865  8 -  45695690 CAGTA-T--------------------TA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528889  8 -   4408762 CAGTA-T--------------------TG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6943  8 +     28062 CAGTA-T--------------------CT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42237  8 -     91139 CAGTA-T--------------------CT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19763  8 +     95584 CAGTA-T--------------------CT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19676  8 +    119600 CAGTA-T--------------------CT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9243  8 +     18648 CAGTA-T--------------------CT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8782  8 -     13885 CAGTA-T--------------------CT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             849  7 -      8861 -AGTA-T--------------------CT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453242  7 + 189096842 -AGTA-T--------------------CT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                764  7 +      8664 -AGTA-T--------------------CT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630064  8 +  17673402 CAGCA-t--------------------ca
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664350  8 +   7040546 CAGCA-t--------------------ca
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208010  8 +   1652518 CAGCA-t--------------------ca
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504429  8 +  60362399 CAGCA-T--------------------CT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8065  8 -     23171 CAGCA-T--------------------CT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221408  8 +   9314153 CAGCA-T--------------------CT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614543  8 +  59632846 CAGCA-T--------------------CT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106124  8 -  63665305 CAGCA-T--------------------CT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407955  8 -  46296322 CAGTA-T--------------------TG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590228  8 +  44709034 CAGTA-T--------------------TG
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    575  8 -      1880 CTGCA-C--------------------CT
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269331  8 +    496798 CTGCA-T--------------------CT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                436  8 -      1021 CAGTA-G--------------------CT
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26746  8 -     39886 CTGCA-T--------------------CT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78367  8 -    217609 CAGCA-T--------------------CA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995472  8 +  23392119 CTGCA-T--------------------TT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998914  8 +  23407841 CTGCA-T--------------------TT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       61995  8 -     66877 CTGCA-T--------------------TT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4161  8 -     12580 CAGTA-T--------------------CT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42219  8 +     53515 CAGTA-T--------------------CT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370150  8 -  26074798 CAGTA-T--------------------CT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7039  8 -     34880 CAGTA-T--------------------CT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66134  8 -     89041 CAGTA-T--------------------CT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1260  8 -      5494 CTGCA-T--------------------CT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491215  8 -  27778364 CAGCA-T--------------------CT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18048  8 +     27315 CAGCA-T--------------------CT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140050  8 -   4669795 CAGTA-T--------------------CT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43792  8 +     47900 CAGTA-T--------------------CT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43619  8 -     44860 CAGTA-T--------------------CT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43605  8 -    148725 CAGTA-T--------------------CT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25822  8 -     40656 CAGTA-T--------------------CT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5788  8 +     20796 CAGTA-T--------------------CT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10865  8 -     17524 CAGTA-T--------------------CT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26587  8 -     34525 CAGTA-T--------------------CT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10408  8 -     25376 CAGTA-T--------------------CT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363008  8 -  39242232 CAGTA-T--------------------CT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268720  8 +  21565898 CAGTA-T--------------------CT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31054  8 -     45857 CAGTA-T--------------------CT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       25993  8 -     32606 CAGTA-T--------------------CT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2152  8 +      8499 CAGTA-T--------------------CT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24550  8 +     70610 CAGTA-T--------------------CT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21479  8 +     36323 CAGTA-T--------------------CT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11846  8 -     19938 GAGCA-T--------------------CG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29663  8 -     33796 CAGCA-G--------------------CT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4180  8 -     15404 CAGCA-G--------------------CT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8041  8 -     32913 CGGTA-T--------------------CT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18454  8 -     40346 CAGTA-T--------------------CT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18709  8 +    216457 CGGTA-T--------------------CT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18502  8 +     39636 CGGTA-T--------------------CT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237908  8 -   2543920 ctgca-t--------------------tt
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3091  8 +      5346 CAGTA-T--------------------CT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41574  8 -    112038 CAGTA-T--------------------CT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7145  8 +     34062 CAGTA-T--------------------CT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342370  8 +  18827391 CAGTA-T--------------------CT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8917  8 -     44032 CAGTA-T--------------------CT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303694  8 - 135778131 CAGTA-T--------------------CT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13814  8 +     15858 GAGCA-T--------------------TG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605390  8 -    839153 GAGCA-T--------------------TG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408132  8 -   2368649 CAGTA-T--------------------CT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378007  8 - 200372422 CAGTA-T--------------------CT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1556  8 -     84244 CAGTA-T--------------------CT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806270  8 +  53390261 TGGTT-C--------------------CT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1838  8 -      8242 CAGAA-T--------------------CT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 41319  8 -     83289 CTGCA-T--------------------CT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 2051
s Cricetulus_griseus.LT883664.1                          213113776  8 - 224834208 CTGAA-T--------------------CT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3331  8 +     87169 TAACA-T--------------------CT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644050  8 -   1526836 CTCAA-T--------------------CT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16884  8 +     50838 CTGCA-T--------------------CT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3354  8 +     36344 CTGCA-T--------------------TT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27155  8 +     75252 CTATA-T--------------------TT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109190  8 -   2246927 GAGCA-T--------------------TG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291593  7 +  12879189 -AGTA-T--------------------CT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624406  8 -  35494412 CAGCA-T--------------------CG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864244  8 -  20541912 CAGTG-T--------------------CT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663506  8 -   1390856 CAGCA-T--------------------CT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138292  8 -    198055 CAGCA-T--------------------CT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97898  8 -    115145 CTGCA-T--------------------TT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9416  8 +     14636 CTGCA-T--------------------TT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853779  8 - 111700974 CAGCA-T--------------------CT
i Echinops_telfairi.JH980293.1                           I 1 C 0
s Eidolon_helvum.AWHC01266696.1                               5303  8 +     19438 CACCA-T--------------------CT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238622  8 -    607251 CAGAA-T--------------------TG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107583  8 -  10337057 TAGta-t--------------------ct
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30060  8 +    110024 CTGCA-T--------------------CT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12046  8 +     18970 CTGCA-T--------------------CT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915143  8 +  41312741 CAACA-T--------------------CT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577875  8 +  14770903 CAGTA-T--------------------GT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040103  8 -   4378816 CAGCA-T--------------------CT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374027  8 +  39960074 CAGCA-T--------------------GT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410813  8 -    498745 CAGCA-T--------------------CT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3664865  5 +   7059049 T---T-T--------------------CT
i Erinaceus_europaeus.JH835339.1                         I 360 C 0
s Erythrocebus_patas.Contig38                               261897  8 +  21539334 CAGTA-T--------------------CT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63956  8 -    133382 CAGCA-T--------------------CG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4173  8 +      7672 CAGCA-T--------------------CG
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13789  8 -     24895 CAGCA-A--------------------CT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41498  8 -     70999 CAGCA-A--------------------CT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85460  8 +    112731 CAGCA-A--------------------CT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42029  8 +     68309 CAGCA-G--------------------CT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52355  8 -     65740 CAGCA-A--------------------CT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22984  8 -     75513 CAGCA-G--------------------CT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47181  8 -     97555 CAGCA-A--------------------CT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3906  8 +     30972 CAGCA-A--------------------CT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41626  8 -     52037 CAGCA-A--------------------CT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58028  8 -    111500 CAGCA-G--------------------CT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245788  8 - 206538554 Tagca-t--------------------ct
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115574  8 - 205367284 tagca-t--------------------ct
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26675  8 -     30238 TAGCA-T--------------------CT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123856  8 -    137831 CTATA-T--------------------CT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7401  8 +     22493 CTATA-T--------------------CT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19458  8 -     32986 CTACA-T--------------------CT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_74466               18111  8 +     18121 CACCA-T--------------------CT
i Galeopterus_variegatus.GalVar_scaffold_74466           C 0 N 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90308  8 -     95226 CAGTA-T--------------------TG
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33314  8 -     36801 CTGAA-T--------------------CT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4853  8 -      8343 CAGCA-T--------------------CT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253865  8 - 186649187 CAGCA-T--------------------CT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     810  8 -     78134 CTGAA-T--------------------TT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13714  8 -     40692 CAGTA-G--------------------AT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35116  8 +     49394 CAGCA-G--------------------AT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59984  8 -     66874 CAGCA-G--------------------AT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8858  8 -     42923 CAGCA-G--------------------AT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15858  8 -     53142 CAGCA-G--------------------AT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29818  8 -    327341 TAGCA-T--------------------CT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8062  8 +     48891 CAGTA-T--------------------TG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                5983  8 +      6687 CAGCA-T--------------------CT
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6666  8 -     36432 CAGCT-T--------------------CC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49829  8 +     49977 CAGCA-T--------------------CT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141873  8 -    630532 CAGTA-T--------------------CC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68735  8 +     83186 TAGCA-T--------------------CT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70877  8 +    143317 CTGCT-T--------------------TT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4908  8 +     12352 CAGTA-T--------------------CC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12092  8 +     55766 CAGTA-T--------------------CC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051690  8 + 191637585 CAGTA-T--------------------CC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800568  8 +  11177569 CAGTA-T--------------------CC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3515  8 -    135385 CTGCA-T--------------------CT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385887  8 +   7955117 CTGCA-T--------------------CT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1368  8 +     11955 CAGCA-G--------------------CT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2193  8 -     16823 CAGCA-T--------------------CG
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238700  9 +   9596543 ATTGCAT--------------------CT
i Jaculus_jaculus.JH725527.1                             I 3 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64672  8 -     97402 CAGCA-T--------------------CG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42313  8 +    110728 CAGTA-T--------------------CT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61735  8 -     65777 CAGTA-T--------------------GT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758507  8 +  30322482 CAGCA-G--------------------AT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3227  8 -     13097 CAGGA-T--------------------CT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2981  8 +      5940 CAGGA-T--------------------CT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2811  8 -      5717 CAGGA-T--------------------CT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9187  8 -     11567 CAGTA-T--------------------CT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10568  8 -     12945 CAGTA-T--------------------CT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8036  8 +     29618 CAGCA-G--------------------CT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8032  8 +     31569 CAGCA-G--------------------CT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8042  8 +     24756 CAGCA-G--------------------CT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8042  8 +     16388 CAGCA-G--------------------CT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812557  8 -   3914936 CAACA-T--------------------CT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16884  8 +     24238 CAGCA-T--------------------CC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333713  8 +    662738 CAGCA-T--------------------CT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               332935  8 -   1826925 CAGTA-T--------------------CT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9619  8 +     19643 CTACA-T--------------------CT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043276  8 -   6120653 CTACA-T--------------------CT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080057  8 +  43346337 CAGCA-C--------------------CT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613698  8 +  59628241 CAGCA-T--------------------CT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44319  8 -     61512 CAGTA-T--------------------CT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371981  8 -  60120075 CAGTA-T--------------------CT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24244  8 +     30207 CAGTA-T--------------------CT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21347  8 -     24934 CAGTA-T--------------------CT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24197  8 +     30527 CAGTA-T--------------------CT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35373  8 -     50087 CAGTA-T--------------------CT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45117  8 +     51645 CAGTA-T--------------------CT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414320  8 - 187317192 CAGTA-T--------------------CT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398550  8 +  25927173 CAGTA-T--------------------CT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47722  8 -     62418 CAGTA-T--------------------CT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  260  8 +     14901 CAGTA-T--------------------CT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44194  8 +     59329 CAGTA-T--------------------CT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270102  8 +    668171 CAGTA-T--------------------CT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  378  8 +      1732 CAGTA-T--------------------CT
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1900  8 +     17132 CAGTA-T--------------------CT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222267  8 -    270270 CACCA-T--------------------CT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321399  8 +  24302211 CAGTA-T--------------------CT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356231  8 -    752769 CAGTA-T--------------------CT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672587  8 -    737560 CAGCa-t--------------------ct
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219871  8 +    317179 CAGca-t--------------------ct
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500107  8 +  40650429 CTGCA-T--------------------CT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149426  8 +    207569 CAGCA-T--------------------CT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25247  8 -     74585 CAACA-T--------------------CT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49196  8 -    140813 GTGCA-T--------------------CT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80257  8 +     93471 TAGCA-T--------------------CA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9352  8 +     17804 CAGTA-T--------------------CT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9854  8 -     12984 CAGTA-T--------------------CT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18168  8 -     26561 CAGTA-T--------------------CT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983645  8 +  93316391 CAGCA-G--------------------CT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44815  8 +    145209 CAGCA-T--------------------CT
i Microgale_talazaci.MicTal_scaffold_6613                I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184190  8 +    200668 CAGTA-T--------------------CT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961508  8 +  27267610 CGACA-T--------------------CT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362293  8 -   8254450 CAGTA-T--------------------CT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41194  8 -     48117 CAGTA-T--------------------CT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21407  8 -     27822 CAGTA-T--------------------CT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7565  8 +     27589 CAACA-T--------------------CT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51434  8 -     62432 CAGCA-G--------------------CT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352149  8 +    437263 CAGCA-T--------------------CG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178353  8 +    366855 CAGTA-T--------------------CT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23357  8 -     82753 CGGTA-T--------------------TG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17571  8 -     63510 TAGCA-T--------------------CT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38233  8 +     47283 CAGTA-T--------------------GT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592237  8 + 120012414 CTACA-T--------------------CT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686622  8 + 129401213 CTACA-T--------------------CT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216479  8 +  89631738 CTACA-T--------------------CT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495918  8 + 130317789 CTGCA-T--------------------CT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81917  8 -     86153 CTGCA-T--------------------CT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354177  8 +  14710649 CAACA-T--------------------CT
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myotis_brandtii.KE162005.1                               9792483  8 +  10118263 CAGTA-T--------------------GT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386643  8 +   6019432 CAGTA-T--------------------GT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382462  8 +   4330536 CAGTA-T--------------------GT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1290  8 +     18357 CAGTA-T--------------------GT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118657  8 +    130748 GAGCA-T--------------------TG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945143  8 +   3037898 AGGTA-T--------------------CT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28058  8 +     34575 CAGTA-T--------------------CT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468160  8 -  31847680 CAACA-T--------------------CT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226318  8 -   7148211 CAGCA-T--------------------CG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127060  8 -    149072 CCATA-T--------------------CT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52800  8 -    132029 CAGTA-T--------------------CC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8895  8 -     16345 CAGTA-T--------------------CC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14780  8 +     22201 CAGTA-T--------------------CC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413001  8 -  22158432 CAGTA-T--------------------CC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25178  8 -     54323 CAGTA-T--------------------CC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197291  8 +   9404916 CAGCA-T--------------------CT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635619 28 + 196305487 TTATA-TCTCTTTTAATTGCTTATGTGCT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2377 28 -      3937 TTATA-TCTCTTTTAATTGCTTATGTGCT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563884 28 - 199412804 TTACA-TCTCTTTTAATTGCTTATGTGCT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550251  8 -   3988456 CAACA-T--------------------CC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053703  8 -  11899542 CTGCA-T--------------------CT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450756  8 +   2017862 CAACA-T--------------------CT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435193  8 -    630418 CAGTA-T--------------------TG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13192  8 +    150152 CAGTA-T--------------------TG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91844  8 -    140218 CTGCA-T--------------------CT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2738  8 -     41509 CTGCA-T--------------------CT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095588  8 +  10937097 CAGCA-T--------------------CG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12696  8 -     14239 CAGTA-T--------------------CT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102720  8 - 174332312 CAGCA-T--------------------CC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38337  8 +    559221 CAGCA-T--------------------CT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39016  8 -     51505 CTACA-T--------------------CT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352019  8 +   1103335 CTACA-T--------------------CT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403182  8 -  44047080 CAGTA-T--------------------TG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3701  8 +     17875 CAGTA-T--------------------TG
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.KZ622849.1                                 32577  8 -    110857 CAGCA-T--------------------CT
i Pan_troglodytes.KZ622849.1                             I 193 I 247
s Panthera_onca.PanOnc_flattened_line_3271                   23500  8 -    230217 TAGCA-T--------------------CT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460826  8 -  18783137 TAGCA-T--------------------CT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971546  8 +   8748460 TAGCA-T--------------------CT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614624  8 +   2937107 CAGTA-T--------------------TG
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242232  8 - 183742232 CAGTA-T--------------------CT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8694  8 +     21308 CAGTA-T--------------------CT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291268  8 -  20919399 CAGTA-T--------------------CT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21342  8 -     27687 CAGTA-T--------------------CT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14488  8 +     16796 CAGTA-T--------------------CT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21299  8 -     23640 CAGTA-T--------------------CT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14142  8 +     78924 TAGCA-T--------------------CT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25435  2 +     31479 ---------------------------CT
i Perodicticus_ibeanus.k141_1921260                      I 502 C 0
s Perodicticus_potto.k141_1854441                            17804  2 -     24908 ---------------------------CT
i Perodicticus_potto.k141_1854441                        I 503 C 0
s Peromyscus_maniculatus.KI615324.1                         245934  8 +  18517816 CTGCA-T--------------------CT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11443  8 -     15039 CAGCA-T--------------------CG
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1506  8 +     55023 CAGTA-T--------------------CT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1056  8 -     89929 CAGTA-T--------------------CT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1645  8 +     40849 CAGTA-T--------------------CT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253309  8 +  14605196 CAGTA-T--------------------CT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2816  8 +     22231 CAGTA-T--------------------GT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63950  8 +    207309 CAGTA-T--------------------CT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5043  8 -     25401 CAGTA-T--------------------CT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30786  8 +     58159 CAGTA-T--------------------CT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31062  8 +     63561 CAGTA-T--------------------CT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30822  8 +     51148 CAGTA-T--------------------CT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555792  8 -   4542175 CAGTA-T--------------------CT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30806  8 +     51125 CAGTA-T--------------------CT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3530  8 -      8168 CAGTA-T--------------------CA
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7209  8 +     39866 CAATA-T--------------------CT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2293  8 -      9282 CGATA-T--------------------CT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41697  8 -     87950 CGATA-T--------------------CT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42091  8 -     88961 CGATA-T--------------------CT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6789  8 -     39403 CGATA-T--------------------CT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41740  8 +     87928 CGATA-T--------------------CT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6786  8 -     60166 CAATA-T--------------------CT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13723  8 -     67232 CAATA-T--------------------CT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41639  8 -     90634 CGATA-T--------------------CT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43106  8 +     89403 CAATA-T--------------------CT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177018  8 - 189387572 CAGTA-T--------------------CT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191835  8 -   9816681 CAGTA-T--------------------CT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26641  8 +     69807 TAGTA-T--------------------CT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43837  8 -     80239 CAGTA-T--------------------CT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2369  8 +      3019 CAGCA-T--------------------CT
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981662  8 +   4620579 CAGCA-G--------------------AT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565129  8 -   2598838 CAGCA-G--------------------CT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2765  8 -      7103 CAGCA-G--------------------CT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3362  8 -     11706 CAGCA-G--------------------CT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7098  8 -     30655 CAGCA-G--------------------CT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33423  8 +     46564 CAGCA-G--------------------CT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93694  8 -     98465 CAGCA-G--------------------CT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7331  8 +     35169 CAGCA-G--------------------CT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36537  8 +     52041 GTGCA-T--------------------CT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51236  8 -     66298 CAGTA-T--------------------CT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3746  8 -     18639 CAACA-T--------------------CT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839953  8 -  28871421 CACCA-T--------------------CT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536462  8 -   4952924 CACCA-T--------------------CT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098140  8 +  38429054 TAGCA-T--------------------CT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26015  8 +     91421 CAGTA-T--------------------CT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152507  8 -   7812017 CAGTA-T--------------------CT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6882  8 +     72585 CAGTA-T--------------------CT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52112  8 +     55069 CAGTA-T--------------------TG
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021835  8 -  90668790 ctGCA-C--------------------TC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913847  8 +   3329780 CAGCA-T--------------------CT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              587  8 +      7119 CAGTA-T--------------------CT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121195  8 + 195417433 CAGTA-T--------------------CT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235437  8 -   7961872 CAGTA-T--------------------CT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73861  8 -    116970 CACCA-T--------------------CT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3089  8 +     27962 CAGTA-T--------------------CT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2984  8 +      6077 CAGTA-T--------------------CT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3075  8 +      5971 CAGTA-T--------------------CT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               2997  8 +      5932 CAGTA-T--------------------CT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1339  8 -      4390 CAGTA-T--------------------CT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390774  8 - 209938924 CAGTA-T--------------------CT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2946  8 +      5979 CAGTA-T--------------------CT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3708  8 -      4301 CAGTA-T--------------------CT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6774  8 +     16473 CAGTA-T--------------------TG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108115  8 + 121099817 CAGTA-T--------------------CT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29678  8 -     47369 CAGTA-T--------------------CT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30064  8 -     79414 CAGTA-T--------------------CT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26755  8 -     34454 CAGTA-T--------------------CT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14162  8 -     22428 CAGTA-T--------------------CT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29310  8 -     47109 CAGTA-T--------------------CT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237368  8 +   5703754 CAGTA-T--------------------CT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6958  8 +     21866 CAGTA-T--------------------CT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115064  8 +    313613 CAGTA-C--------------------CA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24334  8 +     27374 CAGTA-T--------------------CT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27848  8 +     58920 CAGTA-T--------------------CT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14344  8 -     45317 CAGTA-T--------------------CT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22003  8 -     42441 CAGTA-T--------------------CT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24681  8 -     29113 CAGTA-T--------------------CT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27755  8 -     48123 CAGTA-T--------------------CT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48310  8 +     77746 CTGCA-T--------------------GT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857371  8 -   1910179 CAGCA-T--------------------CT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867467  8 +   3870691 CTGCA-T--------------------CT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5735  8 -     97271 CGACA-T--------------------CT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123975  8 +    196729 TAGCA-T--------------------CT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390262  8 +   1523678 CAGTA-T--------------------CC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13220  8 +     22964 CAGTA-T--------------------CT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1773  8 +      5583 GAGCA-T--------------------TG
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190669  8 +    199430 CAGCA-T--------------------CT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104621  8 -    539355 CAGCA-T--------------------CT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5955  8 +      6850 CAGCA-T--------------------CT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6006  8 +     20590 CAGCA-T--------------------CT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352218  8 - 186847797 CAGTA-T--------------------CT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18878  8 -     31044 GAGAA-T--------------------TG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479264  8 -    610378 GAATA-T--------------------CT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19880  8 +     26378 CAGTA-T--------------------CT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32558  8 -     78344 CAGTA-T--------------------CT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19205  8 +     25722 CAGTA-T--------------------CT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27510  8 -     62838 CAGTA-T--------------------CT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27556  8 +     46913 CAGTA-T--------------------CT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8365  8 -     28527 CAGTA-T--------------------CT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29447  8 -     64340 CAGTA-T--------------------CT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27484  8 -     63452 CAGTA-T--------------------CT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8929  8 +     22490 CAGTA-T--------------------CT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2355  8 -      6147 CAGTA-T--------------------CT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9260  8 -     13050 CAGTA-T--------------------CT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254500  8 -   6242583 CAGTA-T--------------------CT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         524  8 +     19340 CAGTA-T--------------------CT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172388  8 -    200418 CATCA-C--------------------CA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479517  8 -  10818551 CAGCG-T--------------------CT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832901  8 -   4065304 CAGCG-T--------------------CT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360323  8 -  33153633 CAGCA-T--------------------CG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2815  8 -     21056 CTGTA-T--------------------GT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180914  8 +   5085361 CAACA-T--------------------CT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24306  8 -     30710 CAGCA-G--------------------CT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23213  8 -    147434 CAGCA-G--------------------CT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75398  8 +   5488506 CAGCa-t--------------------ca
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104059  8 -    112863 CAGCA-T--------------------CT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173246  8 -    224448 CTGCA-C--------------------CT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27952  8 -     86975 CAACA-T--------------------CT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       253  9 -       753 ATCAATT--------------------AT
i Zapus_hudsonius.ZapHud_scaffold_533409                 I 3 C 0
e Sorex_araneus.JH798187.1                                 4669981 82 +  18376816 I
e Crocidura_indochinensis.CroInd_scaffold_77846               6137 25 +     12657 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005         877  0 +      9367 C
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   4480  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18949545  0 -  37912305 C
e Tupaia_tana.TupTan_flattened_line_394                       7186  0 -     70247 C
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Mesocricetus_auratus.KB708134.1                         17428312  0 +  29670104 C
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4559 8 +     36723 TAA-GGGAA
s Acinonyx_jubatus.LLWD01001279.1                           811887 8 +   1699592 TCA-GGGAA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24207 8 +     63021 TAA-GGTAA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414416 8 +  29979442 TAA-GGGAA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214726 8 +    347723 TAA-GGGAA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17152 8 -     61208 TAA-AGTAA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46875 8 +     53615 TCA-GGGAA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42836 8 +     44087 TCA-GGGAA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15461 8 -     21945 TCA-GGGAA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17144 8 +     32033 TCA-GGGAA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71315 8 -     84148 TAA-GGGAA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43554 8 -     78289 TAA-GGGAA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             42993 8 +     55831 TAA-GGGAA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41443 8 -     64179 TAA-GGGAA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23082 8 -     24835 TAA-GGGAA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40068 8 +     45454 TAA-GGGAA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45714 8 +     70886 TAA-GGGAA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7890 8 +     30854 TAA-GGGAA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32026 8 +     42133 TAA-GGGAA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584251 8 +   2318259 CAA-GGGAA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176230 8 -    412891 AAA-GGTAA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49350 8 -     68529 CAA-GGGAA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     269 8 +     17741 A-AAGGGAA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              894 8 -     15923 A-AAGGGAA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1169 8 -     16391 A-AAGGGAA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                729 8 -     17186 A-AAGGGAA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15113 8 -     32367 TAA-GGTAA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18650 8 -     45910 TAA-GGGGA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4509 8 -     15198 TAA-GGAAA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273777 9 +  21539123 TAAAGGGAA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9945 8 +     48076 TAA-GGGAA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5082 8 -     28759 TAA-GGGAA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32634 9 +     44353 TAAAGGGAA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48005 8 -     71267 TAA-GGGAA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22064 8 -     33135 TAA-GGGAA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5253 8 +     11645 TAA-GGGAA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5259 8 -     19611 TAA-GGGAA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956085 8 -  23207421 TGA-GGGAA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3294 8 -      4711 TGA-GGGAA
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85242 8 +    124022 CAA-GGGAA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20779 8 +    288883 CAA-GGGAA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355166 8 +  48749331 CAA-GGGAA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753734 8 +   1948126 CAA-GGGAA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27543873 8 -  45695690 CAA-GGGAA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1528897 8 -   4408762 CAA-GGGAA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6951 8 +     28062 TAA-GGGAA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42245 8 -     91139 TAA-GGGAA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19771 8 +     95584 TAA-GGGAA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19684 8 +    119600 TAA-GGGAA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9251 8 +     18648 C-AAAGGAA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8790 8 -     13885 C-AAGGGAA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             856 8 -      8861 C-AAGGGAA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453249 8 + 189096842 C-AAGGGAA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                771 8 +      8664 C-AAGGGAA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630072 8 +  17673402 taa-aggaa
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664358 8 +   7040546 taa-aggaa
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208018 8 +   1652518 taa-aggaa
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504437 8 +  60362399 TAA-GGGAA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8073 8 -     23171 TAA-GGGAA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221416 8 +   9314153 TAA-GGGAA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614551 8 +  59632846 TAA-GGGAA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106132 8 -  63665305 TAA-GGGAA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407963 8 -  46296322 CAA-GGGAA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590236 8 +  44709034 CAA-GGGAA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    583 8 -      1880 TAA-GTTAA
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269339 8 +    496798 TGA-AGGAA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                444 8 -      1021 TAA-GGAAA
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 I 20
s Castor_canadensis.CasCan_scaffold_39952                    26754 8 -     39886 TAA-AGAAA
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78375 8 -    217609 TAA-GGGAA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995480 8 +  23392119 TAA-GGTAA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998922 8 +  23407841 TAA-GGTAA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62003 8 -     66877 TAA-GGTAA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4169 8 -     12580 C-AAAGGAA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42227 8 +     53515 C-AAAGGAA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370158 8 -  26074798 TAA-GGGAA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7047 8 -     34880 TAA-AGGAA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66142 8 -     89041 TAA-GGGAA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1268 8 -      5494 TGA-AGGAA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491223 8 -  27778364 TAA-GGGAA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18056 8 +     27315 TAA-GGGAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140058 8 -   4669795 TCA-GGGAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43800 8 +     47900 TCA-GGGAA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43627 8 -     44860 TCA-GGGAA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43613 8 -    148725 TCA-GGGAA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25830 8 -     40656 TCA-GGGAA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5796 8 +     20796 TCA-GGGAA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10873 8 -     17524 TTA-GGGAA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26595 8 -     34525 TCA-GGGAA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10416 8 -     25376 TCA-GGGAA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363016 8 -  39242232 TCA-GGGAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268728 8 +  21565898 TCA-GGGAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31062 8 -     45857 TCA-GGGAA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26001 8 -     32606 TCA-GGGAA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2160 8 +      8499 TCA-GGGAA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24558 8 +     70610 TCA-GGGAA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21487 8 +     36323 TTA-GGGAA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11854 7 -     19938 TAA-G-GAA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29671 8 -     33796 TAA-GGGAA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4188 8 -     15404 TAA-GGGAA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8049 8 -     32913 TAA-GGGAA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18462 8 -     40346 TAA-GGGAA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18717 8 +    216457 TAA-GAGAA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18510 8 +     39636 TAC-GAGAA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237916 8 -   2543920 taa-agtaa
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3099 8 +      5346 TAA-GGGAA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41582 8 -    112038 TGA-GGGAA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7153 8 +     34062 TGA-GGGAA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342378 8 +  18827391 TCA-GGGAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8925 8 -     44032 TCA-GGGAA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303702 8 - 135778131 TCA-GGGAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13822 7 +     15858 TAA-G-AAA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605398 7 -    839153 TAA-G-AAA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408140 8 -   2368649 TCA-GGGAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378015 8 - 200372422 TCA-GGGAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1564 8 -     84244 TCA-GGGAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806278 8 +  53390261 TAA-GAGTA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1846 8 -      8242 TAA-GGTAA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43378 8 -     83289 TAA-AGTAA
i Cricetomys_gambianus.CriGam_scaffold_14425             I 2051 C 0
s Cricetulus_griseus.LT883664.1                          213113784 8 - 224834208 AAA-GGTAA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3339 8 +     87169 TAA-GGGGA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644058 3 -   1526836 T------AA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16892 8 +     50838 CAA-GGTAA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3362 8 +     36344 CAA-GGTAA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27163 8 +     75252 TAA-GGTAA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109198 7 -   2246927 GAA-A-GAA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291600 8 +  12879189 TAA-TGGAA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624414 8 -  35494412 TGA-AGGAA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864252 8 -  20541912 TAC-GGTAA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663514 8 -   1390856 TAA-GGGAA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138300 8 -    198055 TAA-GGGAA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97906 8 -    115145 TAA-AGTAA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9424 8 +     14636 TAA-GGTAA
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 8
s Echinops_telfairi.JH980293.1                            62853787 8 - 111700974 TAG-AGGCA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5311 8 +     19438 TAT-GGTAA
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238630 8 -    607251 CAA-GGGAA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107591 8 -  10337057 aaa-agaaa
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30068 8 +    110024 AAA-GGCAA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12054 8 +     18970 AAA-GGTAA
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915151 8 +  41312741 TAA-GGGAA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577883 8 +  14770903 TAA-GGTAA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040111 8 -   4378816 TAA-GGGAA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374035 8 +  39960074 TAA-GGGAA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410821 8 -    498745 TAA-GGGAA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3664870 8 +   7059049 TAA-GGGAA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               261905 8 +  21539334 TCA-GGGAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63964 8 -    133382 TGA-GGGAA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4181 8 +      7672 TGA-GGGAA
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13797 8 -     24895 TAA-GGGGA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41506 8 -     70999 TAA-GGGGA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85468 8 +    112731 TAA-GGGGA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42037 8 +     68309 TAA-GGGGA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52363 8 -     65740 TAA-GGGGA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                22992 8 -     75513 TAA-GGGGA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47189 8 -     97555 TAA-GGGGA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3914 8 +     30972 TAA-GGGGA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41634 8 -     52037 TAA-GGGGA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58036 8 -    111500 TAA-GGGGA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245796 8 - 206538554 tca-gggaa
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115582 8 - 205367284 tca-gggaa
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26683 8 -     30238 TCA-GGGAA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123864 8 -    137831 TAA-GGGGA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7409 8 +     22493 TAA-GGGGA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19466 8 -     32986 TAA-GGGGA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 197 8 -     28519 TAA-GAGAA
i Galeopterus_variegatus.GalVar_scaffold_51812           N 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90316 8 -     95226 CAA-GGGAA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33322 8 -     36801 CAA-AGTAA
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4861 8 -      8343 TAA-GGGAA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253873 8 - 186649187 TAA-GGGAA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     818 8 -     78134 CAA-AGTAA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13722 8 -     40692 TAA-GGGGA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35124 8 +     49394 TAA-GGGGA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              59992 8 -     66874 TAA-GGGGA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8866 8 -     42923 TAA-GGGGA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15866 8 -     53142 TAA-GGGGA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29826 8 -    327341 TAA-GGGGA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8070 8 +     48891 CAA-GGGAA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                5991 8 +      6687 TAA-AGGGA
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6674 8 -     36432 TGA-GGGGA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49837 8 +     49977 TAA-GGTAA
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141881 8 -    630532 TAA-GGGAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68743 8 +     83186 TAA-GGGGA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70885 8 +    143317 TAA-AGTAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4916 8 +     12352 TAA-GGGAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12100 8 +     55766 TAA-GGGAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051698 8 + 191637585 TAA-GGGAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800576 8 +  11177569 TAA-GGGAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3523 8 -    135385 TAA-GGTAA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385895 8 +   7955117 TCA-GGTAA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1376 8 +     11955 TAA-GGGAC
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2201 8 -     16823 TGA-GGGAA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238709 8 +   9596543 TAA-AGTAA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64680 8 -     97402 TGA-GGGAA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42321 8 +    110728 TAA-GGGAA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61743 8 -     65777 TAA-GGTAA
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758515 8 +  30322482 TAA-GGGGA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3235 8 -     13097 T-AAGGGAA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2989 8 +      5940 T-AAGGGAA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2819 8 -      5717 T-AAGGGAA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9195 8 -     11567 T-CAGGGAA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10576 8 -     12945 T-CAGGGAA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8044 8 +     29618 TAA-GGGAA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8040 8 +     31569 TAA-GGGAA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8050 8 +     24756 TAA-GGGAA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8050 8 +     16388 TAA-GGGAA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812565 8 -   3914936 TAA-GAGAA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16892 8 +     24238 TAA-GGGAA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333721 8 +    662738 TGA-GGGAA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               332943 8 -   1826925 TCA-GGGAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9627 8 +     19643 TAA-GGGGA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043284 8 -   6120653 TAA-GGGGA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080065 8 +  43346337 TAA-GGGAA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613706 8 +  59628241 TAA-GGGAA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44327 8 -     61512 TCA-GGGAA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371989 8 -  60120075 TCA-GGGAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24252 8 +     30207 TCA-GGGAA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21355 8 -     24934 TCA-GGGAA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24205 8 +     30527 TCA-GGGAA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35381 8 -     50087 TCA-GGGAA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45125 8 +     51645 TCA-GGGAA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414328 8 - 187317192 TCA-GGGAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398558 8 +  25927173 TCA-GGGAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47730 8 -     62418 TCA-GGGAA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  268 8 +     14901 TCA-GGGAA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44202 8 +     59329 TCA-GGGAA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270110 8 +    668171 TCA-GGGAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  386 8 +      1732 TCA-GGGAA
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1908 8 +     17132 TCA-GGGAA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222275 8 -    270270 TAT-GGCAA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321407 8 +  24302211 TCA-GGGAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356239 8 -    752769 TCA-GGGAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672595 8 -    737560 taa-agaaa
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219879 8 +    317179 taa-agaaa
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500115 8 +  40650429 TAA-GGTAA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149434 8 +    207569 TAA-GGTAA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25255 8 -     74585 TAA-GGGAA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49204 8 -    140813 TAA-GGTAA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80265 8 +     93471 TGA-GGGAA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9360 8 +     17804 C-AAAGGAA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9862 8 -     12984 C-AAAGGAA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18176 8 -     26561 C-AAAGGAA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983653 8 +  93316391 TAA-GGGAA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44823 8 +    145209 TAA-AGGCA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184198 8 +    200668 TAA-GGTAA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961516 8 +  27267610 AAA-GGTAA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362301 8 -   8254450 TAa-ggtaa
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41202 8 -     48117 TAA-GGTAA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21415 8 -     27822 TCA-GGGAA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7573 8 +     27589 TAA-GAGAA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51442 8 -     62432 TAA-AGGAA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352157 8 +    437263 TGA-AGGAA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178361 8 +    366855 TAA-GGTAA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  23365 8 -     82753 CAA-GGGAA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17579 8 -     63510 TAA-GGGGA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38241 8 +     47283 TAA-GGTAA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592245 8 + 120012414 TAA-GATAA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686630 8 + 129401213 TAA-GATAA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216487 8 +  89631738 TAA-GATGA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495926 8 + 130317789 TAA-GATAA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81925 8 -     86153 CAA-AGTAA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354185 8 +  14710649 TAA-GGGAA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792491 8 +  10118263 TAA-GGTAA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386651 8 +   6019432 TAA-GGTAA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382470 8 +   4330536 TAA-GGTAA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1298 8 +     18357 TAA-GGTAA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118665 7 +    130748 TAA-G-GAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945151 8 +   3037898 CAT-AGTAG
i Nannospalax_galili.KL204047.1                          C 0 I 46
s Nasalis_larvatus.k141_1350636                              28066 8 +     34575 TCA-GGGAA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468168 8 -  31847680 TAA-GAGAA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226326 8 -   7148211 TGA-AGGAA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127068 8 -    149072 TAA-GGTAA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52808 8 -    132029 TAA-GGGAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8903 8 -     16345 TAA-GGGAA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14788 8 +     22201 TAA-GGGAA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413009 8 -  22158432 TAA-GGGAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25186 8 -     54323 TAA-GGGAA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197299 8 +   9404916 TAA-GGGAA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635647 8 + 196305487 CAC-TGGTG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2405 8 -      3937 CAC-TGGTG
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563912 8 - 199412804 CAC-GGGTG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550259 8 -   3988456 CAA-GGCAA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053711 8 -  11899542 TAA-AGTAA
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450764 8 +   2017862 TAA-GAGAA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435201 8 -    630418 TAA-GGGAA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13200 8 +    150152 CAA-GGGAA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91852 8 -    140218 AAA-GGTAA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2746 8 -     41509 AAA-GGTAA
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095596 8 +  10937097 TGA-AGGAA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12704 8 -     14239 TAA-GGGAA
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102728 8 - 174332312 TAA-GGAAA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38345 8 +    559221 TAA-GGGAA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39024 8 -     51505 TAA-GGGGA
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352027 8 +   1103335 TAA-GGGGA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403190 8 -  44047080 CAA-GGGAA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3709 8 +     17875 CAA-GGGAA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471902 8 - 189151597 TAA-GGGAA
i Pan_troglodytes.CM009242.2                             I 8 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23508 8 -    230217 TCA-GGGAA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460834 8 -  18783137 TCA-GGGAA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971554 8 +   8748460 TCA-GGGAA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614632 8 +   2937107 CAA-GGGAA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242240 8 - 183742232 TCA-GGGAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8702 8 +     21308 TCA-GGGAA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291276 8 -  20919399 TCA-GGGAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21350 8 -     27687 TCA-GGGAA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14496 8 +     16796 TCA-GGGAA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21307 8 -     23640 TCA-GGGAA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14150 8 +     78924 TAA-GGGGA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25437 8 +     31479 TAA-GGGGA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17806 8 -     24908 TAA-GGGGA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245942 8 +  18517816 AAA-AGTAA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11451 8 -     15039 TGA-AGGAA
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1514 8 +     55023 TCA-GGGAA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1064 8 -     89929 TCA-GGGAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1653 8 +     40849 TCA-GGGAA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253317 8 +  14605196 TCA-GGGAA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2824 8 +     22231 TAA-GGTAA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63958 8 +    207309 TAA-GGGAA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5051 8 -     25401 TAA-CGGAA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30794 8 +     58159 TAA-GGGAA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31070 8 +     63561 TAA-GGGAA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30830 8 +     51148 TAA-GGGAA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555800 8 -   4542175 TAA-GGGAA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30814 8 +     51125 TAA-GGGAA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3538 8 -      8168 TGA-GGGAA
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7217 8 +     39866 TAA-GGGAA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2301 8 -      9282 TAA-GGGAA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41705 8 -     87950 TAA-GGGAA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42099 8 -     88961 GAA-GGGAA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6797 8 -     39403 TAA-GGGAA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41748 8 +     87928 TAA-GGGAA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6794 8 -     60166 TAA-GGGAA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13731 8 -     67232 TAA-GGGAA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41647 8 -     90634 GAA-GGGAA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43114 8 +     89403 TAA-GGGAA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177026 8 - 189387572 TAA-GGGAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191843 8 -   9816681 TAA-GGGAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26649 8 +     69807 TCA-GGGAA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43845 8 -     80239 TCA-GGGAA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2377 8 +      3019 TAA-AGGGA
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981670 8 +   4620579 TAA-GGGGA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565137 8 -   2598838 TAA-GGGAA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2773 8 -      7103 TAA-GGGAA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3370 8 -     11706 TAA-GGGAA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7106 8 -     30655 TAA-GGGAA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33431 8 +     46564 TAA-GGGAA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93702 8 -     98465 TAA-GGGAA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7339 8 +     35169 TAA-GGGAA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36545 8 +     52041 TAA-GGTAA
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51244 8 -     66298 TAA-GGTAA
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3754 8 -     18639 TAA-GGGAA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839961 8 -  28871421 TAC-GGTAA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536470 8 -   4952924 TAT-GGTAA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098148 8 +  38429054 TCA-GGGAA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26023 8 +     91421 TCA-GGGAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152515 8 -   7812017 TCA-GGGAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6890 8 +     72585 TCA-GGGAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52120 8 +     55069 TAA-GGGTA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021843 8 -  90668790 CAA-GTTAA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913855 8 +   3329780 TAA-GGTAA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              595 8 +      7119 TCA-GGGAA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121203 8 + 195417433 TCA-GGGAA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235445 8 -   7961872 TCA-GGGAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73869 8 -    116970 TAT-GGTAG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3097 8 +     27962 T-AAGGGAA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             2992 8 +      6077 T-AAGGAAA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3083 8 +      5971 T-AAGGGAA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3005 8 +      5932 T-AAGGGAA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1347 8 -      4390 T-AAGGGAA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390782 8 - 209938924 T-AAGGGAA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2954 8 +      5979 T-AAGGGAA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3716 8 -      4301 T-AAGGAAA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6782 8 +     16473 CAA-GAGAC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108123 8 + 121099817 TAAGGGAA-
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29686 8 -     47369 TAAGGGAA-
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30072 8 -     79414 TAAGGGAA-
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26763 8 -     34454 TAAGGGAA-
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14170 8 -     22428 TAAGGGAA-
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29318 8 -     47109 TAAGGGAA-
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237376 8 +   5703754 TAA-GGGAA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6966 8 +     21866 TAA-GGGAA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115072 8 +    313613 TAA-GAGAA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24342 8 +     27374 TCA-GGGAA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27856 8 +     58920 TCA-GGGAA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14352 8 -     45317 TCA-GGGAA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22011 8 -     42441 TCA-GGGAA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24689 8 -     29113 TCA-GGGAA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27763 8 -     48123 TCA-GGGAA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48318 8 +     77746 AAA-GGTAA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857379 8 -   1910179 TAG-GGAAA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867475 8 +   3870691 TCA-GGTAA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5743 8 -     97271 TAA-GGGAA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123983 8 +    196729 TAA-GGGGA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390270 8 +   1523678 TAA-GGGAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13228 8 +     22964 TAA-GATAA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1781 7 +      5583 TAA-G-GAA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190677 8 +    199430 TAA-GGGAA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104629 8 -    539355 TAA-GGGAA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5963 8 +      6850 TAA-AGGAA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6014 8 +     20590 TAA-AGGAA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352226 8 - 186847797 TCA-GGGAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18886 7 -     31044 TAA-G-GAA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479272 8 -    610378 TAA-GGAAG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19888 8 +     26378 TCA-GGGAA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32566 8 -     78344 TCA-GGGAA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19213 8 +     25722 TCA-GGGAA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27518 8 -     62838 TCA-GGGAA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27564 8 +     46913 TCA-GGGAA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8373 8 -     28527 TCA-GGGAA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29455 8 -     64340 TCA-GGGAA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27492 8 -     63452 TCA-GGGAA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8937 8 +     22490 TCA-GGGAA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2363 8 -      6147 TCA-GGGAA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9268 8 -     13050 TCA-GGGAA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254508 8 -   6242583 TCA-GGGAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         532 8 +     19340 TCA-GGGAA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172396 8 -    200418 CAG-GGGAA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479525 8 -  10818551 GAA-GGGAA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832909 8 -   4065304 TAA-GGGCA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360331 8 -  33153633 TGA-AGGAA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2823 8 -     21056 TAA-GAGAG
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180922 8 +   5085361 TAA-GGGAA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24314 8 -     30710 TAA-GGGAA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23221 8 -    147434 TAA-GGAAA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75406 8 +   5488506 taa-aggaa
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104067 8 -    112863 TAA-GGGAA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173254 8 -    224448 TAA-GGTAA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27960 8 -     86975 TAA-GAGAA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       262 4 -       753 TAA-----A
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
e Sorex_araneus.JH798187.1                                 4669981 82 +  18376816 I
e Crocidura_indochinensis.CroInd_scaffold_77846               6137 25 +     12657 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005         877 0 +      9367 C
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   4480 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18949545 0 -  37912305 C
e Tupaia_tana.TupTan_flattened_line_394                       7186 0 -     70247 C
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Mesocricetus_auratus.KB708134.1                         17428312 0 +  29670104 C
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4567 19 +     36723 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
s Acinonyx_jubatus.LLWD01001279.1                           811895 21 +   1699592 A--------T--------ATT---CAT----ATG------------CACTG-GACCT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24215 19 +     63021 A--------C--------CTT---CAT----ATG------------CACTG-TA--C
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414424 21 +  29979442 A--------T--------GTT---CAT----ATG------------TActg-cacct
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214734 21 +    347723 A--------T--------GTT---CAT----ATA------------TACtg-cacct
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17160 16 -     61208 A--------T----------T----AA----GTA------------TACTG-TA--T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46883 19 +     53615 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42844 19 +     44087 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15469 19 -     21945 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17152 19 +     32033 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71323 19 -     84148 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43562 19 -     78289 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43001 19 +     55831 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41451 19 -     64179 G--------T--------ACT---TAT----GTG------------TATTG-TA--C
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23090 19 -     24835 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40076 19 +     45454 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45722 19 +     70886 A--------T--------ACT---TAT----GTG------------TATTG-TA--C
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7898 19 +     30854 G--------T--------ACT---TAT----GTG------------TATTG-TA--C
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32034 19 +     42133 G--------T--------ACT---TAT----GTG------------TATTG-TA--C
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584259 19 +   2318259 A--------T--------ATT---CAT----TTG------------TACTG-ca--c
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 163
s Anoura_caudifer.AnoCau_scaffold_1412                      176238 19 -    412891 A--------T--------ATT---CAT----GAC------------TATGA-CA--C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_21030             49358 19 -     68529 A--------T--------ATT---CAT----GTG------------TACTG-CA--C
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 162
s Aotus_azarae.k141_887050                                     277 19 +     17741 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              902 19 -     15923 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1177 19 -     16391 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                737 19 -     17186 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15121 19 -     32367 A--------T--------ATT---CAT----GTG------------TAGTC-TA--T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18658 20 -     45910 C--------A--------GTT--CCAT----GAG------------TGTTA-GA--T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4517 19 -     15198 A--------T--------ATT---TAT----GCA------------TATGA-CA--C
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 1
s Ateles_geoffroyi_b.tarseq_1536                               273786 19 +  21539123 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9953 19 +     48076 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5090 19 -     28759 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32643 19 +     44353 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48013 19 -     71267 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22072 19 -     33135 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5261 19 +     11645 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5267 19 -     19611 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956093 19 -  23207421 A--------T--------ATT---CAT----GTG------------TAGtg-ca--c
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 2
s Balaenoptera_bonaerensis.DF507193.1                         3302 19 -      4711 A--------T--------ATT---CAT----GTG------------TAGtg-ca--c
i Balaenoptera_bonaerensis.DF507193.1                    C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_7278                     85250 19 +    124022 A--------T--------ATT---CAT----ATG------------TACTG-CA--C
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 163
s Bison_bison.KN261452.1                                     20787 19 +    288883 A--------T--------ATT---CAT----GTG------------TACCA-CA--C
i Bison_bison.KN261452.1                                 C 0 I 158
s Bos_indicus.CM003047.1                                  20355174 19 +  48749331 A--------T--------ATT---CAT----GTG------------TACCA-CA--C
i Bos_indicus.CM003047.1                                 C 0 I 157
s Bos_mutus.JH880303.1                                      753742 19 +   1948126 A--------T--------ATT---CAT----GTG------------TACCA-CA--C
i Bos_mutus.JH880303.1                                   C 0 I 157
s Bos_taurus.CM000203.6                                   27543881 19 -  45695690 A--------T--------ATT---CAT----GTG------------TACCA-CA--C
i Bos_taurus.CM000203.6                                  C 0 I 157
s Bubalus_bubalis.KI419123.1                               1528905 19 -   4408762 A--------T--------ATT---CAT----GTG------------TACCG-CA--C
i Bubalus_bubalis.KI419123.1                             C 0 I 158
s Cacajao_ayresi.k141_96119                                   6959 19 +     28062 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42253 19 -     91139 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19779 19 +     95584 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19692 19 +    119600 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9259 19 +     18648 G--------T--------ACT---TAC----ATA------------TATTG-TA--C
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8798 19 -     13885 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             864 19 -      8861 G--------T--------ACT---TAC----ATA------------TATTG-TA--C
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453257 19 + 189096842 G--------T--------ACT---TAC----ATA------------TATTG-TA--C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                779 19 +      8664 G--------T--------ACT---TAC----ATA------------TATTG-TA--C
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630080 19 +  17673402 a--------t--------att---tat----gtg------------tactg-ca--c
i Camelus_bactrianus.KN276810.1                          C 0 I 2
s Camelus_dromedarius.KN272107.1                           4664366 19 +   7040546 a--------t--------att---tat----gtg------------tactg-ca--c
i Camelus_dromedarius.KN272107.1                         C 0 I 2
s Camelus_ferus.KB017975.1                                 1208026 19 +   1652518 a--------t--------att---tat----gtg------------tactg-ca--c
i Camelus_ferus.KB017975.1                               C 0 I 2
s CanFam4.chr16                                           42504445 18 +  60362399 A--------T--------ATT---CAT----ATG------------TACTG-CA---
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8081 18 -     23171 A--------T--------ATT---CAT----ATG------------TACTG-CA---
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221424 18 +   9314153 A--------T--------ATT---CAT----ATg------------tactg-ca---
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614559 18 +  59632846 A--------T--------ATT---CAT----ATg------------tactg-ca---
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106140 18 -  63665305 A--------T--------ATT---CAT----ATg------------tactg-ca---
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27407971 19 -  46296322 A--------T--------ATT---CAT----ATG------------TACTG-ca--c
i Capra_aegagrus.CM003241.1                              C 0 I 163
s Capra_hircus.CM004588.1                                 26590244 19 +  44709034 A--------T--------ATT---CAT----ATG------------TACTG-ca--c
i Capra_hircus.CM004588.1                                C 0 I 163
s Capromys_pilorides.CapPil_scaffold_652123                    591 27 -      1880 A--------TACTGAAATACT---CAT----GCA------------TACCT-TA--T
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269347 18 +    496798 A--------T--------ATT---CAT----GTG------------TAT-G-TA--C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               4819 19 +      5315 A--------T--------ATT---CAT----GCA------------TATGA-CA--C
i Carollia_perspicillata.CarPer_scaffold_170178          I 693 I 8
s Castor_canadensis.CasCan_scaffold_39952                    26762 19 -     39886 A--------A--------ATT---TAT----GCA------------TACTG-AA--C
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78383 19 -    217609 A--------T--------ATA---AAT----GTG------------TAGTG-CA--C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995488 19 +  23392119 G--------T--------GCT---CAT----GTG------------tacta-ta--c
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998930 19 +  23407841 G--------T--------GCT---CAT----GTG------------tacta-ta--c
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62011 19 -     66877 G--------T--------GCT---CAT----GTG------------TACTA-TA--C
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4177 19 -     12580 A--------T--------ACT---TAC----ATA------------TATTG-TA--C
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42235 19 +     53515 A--------T--------ACT---TAC----ATA------------TATTG-TA--C
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370166 19 -  26074798 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7055 19 -     34880 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66150 19 -     89041 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1276 18 -      5494 A--------T--------ACT---CAT----GTG------------TAT-G-TA--C
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491231 21 -  27778364 A--------T--------ATT---CAT----GCA------------TACTG-CACCT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18064 21 +     27315 A--------T--------ATT---CAT----GCA------------TACTG-CACCT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140066 19 -   4669795 G--------T--------ACT---TAC----GTG------------TGTTG-TA--C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43808 19 +     47900 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43635 19 -     44860 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43621 19 -    148725 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25838 19 -     40656 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5804 19 +     20796 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10881 19 -     17524 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26603 19 -     34525 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10424 19 -     25376 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363024 19 -  39242232 G--------T--------ACC---TAT----GTG------------TGTTG-TA--C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268736 19 +  21565898 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31070 19 -     45857 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26009 19 -     32606 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2168 19 +      8499 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24566 19 +     70610 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21495 19 +     36323 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11861 18 -     19938 A--------T--------TTT---CAT----GT-------------TACTG-CA--T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29679 19 -     33796 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4196 19 -     15404 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8057 19 -     32913 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18470 19 -     40346 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18725 19 +    216457 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18518 19 +     39636 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237924 19 -   2543920 a--------t--------act---cAT----Gtg------------tactg-ta--c
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3107 19 +      5346 G--------T--------ACT---TAC----ATG------------TATTG-TG--C
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41590 19 -    112038 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7161 19 +     34062 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342386 19 +  18827391 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8933 19 -     44032 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303710 19 - 135778131 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13829 19 +     15858 A--------T--------ATT---CAT----GAG------------TACTG-CA--T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605405 19 -    839153 A--------T--------ATT---CAT----GAG------------TACTG-CA--T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408148 19 -   2368649 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378023 19 - 200372422 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1572 19 -     84244 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806286  7 +  53390261 A--------T--------TTT---CA-------------------------------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1854 19 -      8242 A--------T--------AGT---CAT----GCG------------TACTG-CA--C
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_14425                 43386 19 -     83289 A--------T--------ATG---CAT----ATC------------AAGTC-TA--C
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113792 19 - 224834208 C--------T--------ATC---CAT----ATG------------TATTG-TA--A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3347 21 +     87169 A--------T--------ATT---CAT----ATG------------CACTG-GACCT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644061 19 -   1526836 C--------T--------ATG---CAT----GTG------------TACTG-TG--C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16900 26 +     50838 A--------TACTGAAATACT---CAT----GT-------------TACTG-TA--T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3370 21 +     36344 A--------TA-T-----ATT---CAT----GTG------------GACTG-TA--C
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27171 19 +     75252 A--------T--------ACT---CAT----GTG------------TACTG-TA--C
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109205 18 -   2246927 A--------C--------ATT---CAT----GT-------------TACTG-CA--T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291608 19 +  12879189 A--------T--------ATT---CAT----GTG------------TATTG-TA--C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624422 19 -  35494412 A--------T--------ATT---CAT----GGG------------TAGTg-ca--c
i Delphinapterus_leucas.KZ290073.1                       C 0 I 2
s Desmodus_rotundus.KZ672289.1                            11864260 19 -  20541912 C--------T--------ATT---CAT----GCA------------TATGA-CA--C
i Desmodus_rotundus.KZ672289.1                           C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663522 21 -   1390856 A--------T--------ATT---CAT----GCA------------TACTG-CACCT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138308 21 -    198055 A--------T--------ATT---CAT----GCA------------TACTG-CACCT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97914 19 -    115145 A--------T--------ACT---CAT----GTG------------TGCTG-TA--C
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949545 10 -  37912305 --------------------------------TA------------TATTG-TA--C
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4480 10 -     10735 --------------------------------TA------------TATTG-TA--C
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9440 11 +     14636 -------------------------------GGG------------TACTG-TA--C
i Dolichotis_patagonum.DolPat_scaffold_80628             I 8 C 0
s Echinops_telfairi.JH980293.1                            62853795  6 - 111700974 A--------C--------ATT---T--------------------------------
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5319 19 +     19438 A--------C--------ATT---CAT----GCG------------TACCA-Ta--c
i Eidolon_helvum.AWHC01266696.1                          C 0 I 1
s Elaphurus_davidianus.JRFZ01104969.1                       238638 19 -    607251 A--------T--------ATT---CAT----GTG------------TACTg-ca--t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 157
s Elephantulus_edwardii.JH947257.1                         9107599 19 -  10337057 a--------t--------att---tat----gtg------------aGTTG-GA--C
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30076 19 +    110024 A--------T--------ATC---TAT----TTG------------CCTTG-TA--C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12062 19 +     18970 A--------T--------ATC---CAT----ATG------------CCTTG-TA--C
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915159 18 +  41312741 A--------T--------GTT---CAT----ATG------------tactg-tg---
i Enhydra_lutris.KZ291758.1                              C 0 I 2
s Eptesicus_fuscus.JH977646.1                             12577891 19 +  14770903 A--------T--------ATT---CAT----GCA------------TACTA-CA--A
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              3040119 21 -   4378816 A--------T--------TTT---CAT----GCA------------TTCTg-cacct
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374043 21 +  39960074 A--------T--------TTT---CAT----GCA------------TTCTg-cacct
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410829 21 -    498745 A--------T--------TTT---CAT----GCA------------TTCTg-cacct
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3664878 18 +   7059049 A--------T--------ATT---CAT----GTT------------TACTG-CC---
i Erinaceus_europaeus.JH835339.1                         C 0 I 2
s Erythrocebus_patas.Contig38                               261913 19 +  21539334 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63972 19 -    133382 A--------T--------ATT---CAT----GTG------------TACTG-CA--C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_118172             4189 19 +      7672 A--------T--------ATT---CAT----GTG------------TACTG-CA--C
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 I 2
s Eulemur_albifrons.k141_51491                               13805 19 -     24895 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41514 19 -     70999 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85476 19 +    112731 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42045 19 +     68309 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52371 19 -     65740 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23000 19 -     75513 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47197 19 -     97555 A--------T--------ATT---AAT----GTG------------TATTA-CA--C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3922 19 +     30972 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41642 19 -     52037 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58044 19 -    111500 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245804 21 - 206538554 a--------t--------act---cCT----ATG------------CACTG-GACCT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115590 21 - 205367284 a--------t--------act---cCT----ATG------------CACTG-GACCT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26691 21 -     30238 A--------T--------ATT---CAT----ATG------------CACTG-GACCT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123872 20 -    137831 C--------A--------GTT--CCAT----GAG------------TGTTA-GA--C
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7417 20 +     22493 C--------A--------GTT--CCAT----GAG------------TGTTA-GA--C
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19474 20 -     32986 C--------A--------GTT--CCAT----GAA------------TGTTA-GA--c
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 205 19 -     28519 A--------T--------ATT---CAC----TTG------------TGCTG-TA--C
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90324 19 -     95226 A--------T--------CTT---CAT----GTG------------TACTG-ca--c
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 160
s Glis_glis.GliGli_scaffold_33859                            33330 19 -     36801 A--------T--------ATT---CAA----GTT------------TACTG-TA--A
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4869 19 -      8343 G--------T--------ACT---TCT----GTG------------TGTTG-TA--A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253881 19 - 186649187 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     826 19 -     78134 A--------T--------ATT---CAA----ATT------------TACTG-TA--A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13730 19 -     40692 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35132 19 +     49394 A--------T--------GTT---AAT----GTG------------TATTA-TA--C
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60000 19 -     66874 A--------T--------GTT---AAT----GTG------------TATTA-TA--C
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8874 19 -     42923 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15874 19 -     53142 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29834 21 -    327341 A--------T--------ATT---CAT----ATG------------CACTG-GACCT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8078 19 +     48891 A--------T--------ATT---CAT----ATG------------TACTG-CA--T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 163
s Heterohyrax_brucei.HetBruBak_scaffold_128297                5999 17 +      6687 G--------T--------GTT---T------GTG------------GGCTG-CA--C
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6682 19 -     36432 A--------T--------ATC---CAT----TTG------------TATTG-CA--C
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_23202               49845 19 +     49977 A--------T--------ATT---CAT----GCA------------TAATA-CA--T
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 I 1
s Hoolock_leuconedys.ctg274                                    141889 19 -    630532 G--------T--------ACT---TAC----ATG------------CATTG-TA--T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68751 21 +     83186 A--------T--------ATT---CAT----ATG------------CGCTG-GACCT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70893 19 +    143317 A--------T--------ACT---CAT----TTG------------TACTA-TA--C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4924 19 +     12352 G--------T--------ACT---TAC----ATG------------CATTG-TA--T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12108 19 +     55766 G--------T--------ACT---TAC----ATG------------CATTG-TA--T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051706 19 + 191637585 G--------T--------ACT---TAC----ATG------------CATTG-TA--T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800584 19 +  11177569 G--------T--------ACT---TAC----ATG------------CATTG-TA--T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3531 19 -    135385 A--------T--------ACT---CAT----GTG------------TACTG-GA--T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385903 19 +   7955117 A--------T--------ATT---CAT----GTG------------TACTC-TA--C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1384 19 +     11955 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2209 19 -     16823 A--------T--------ATT---CAT----GTG------------TACTG-CA--T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 2
s Jaculus_jaculus.JH725527.1                               1238717 18 +   9596543 A--------T--------ATT----AT----GTG------------TATTG-TA--T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64688 19 -     97402 A--------T--------ATT---CAT----GTG------------TACTG-CG--C
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 2
s Lagothrix_lagothricha.k141_246028                          42329 19 +    110728 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61751 19 -     65777 A--------T--------ATC---CAG----GCG------------TACTA-CA--A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 1
s Lemur_catta.scaffold_24                                 14758523 19 +  30322482 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3243 19 -     13097 G--------T--------ACT---TAC----ATG------------TAGTG-TA--C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           2997 19 +      5940 G--------T--------ACT---TAC----ATG------------TAGTG-TA--C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2827 19 -      5717 G--------T--------ACT---TAC----ATG------------TACTG-TA--C
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9203 19 -     11567 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10584 19 -     12945 G--------T--------ACT---TAC----ATG------------TATTA-TA--C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8052 19 +     29618 A--------T--------ATT---AAT----GTA------------TATTA-TA--C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8048 19 +     31569 A--------T--------ATT---AAT----GTA------------TATTA-TA--C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8058 19 +     24756 A--------T--------ATT---AAT----GTA------------TATTA-TA--C
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8058 19 +     16388 A--------T--------ATT---AAT----GTA------------TATTA-TA--C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812573 21 -   3914936 A--------T--------GTT---CAT----ATG------------tactg-tatct
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16900 19 +     24238 C--------T--------ATT---CAT----GGA------------TACTA-TA--C
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333729 19 +    662738 A--------T--------ATT---CAT----GTG------------TACTg-ca--c
i Lipotes_vexillifer.KE559953.1                          C 0 I 2
s Lophocebus_aterrimus.ctg367                               332951 19 -   1826925 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9635 20 +     19643 C--------A--------GTT--CCAT----GAG------------TGTTA-GA--C
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043292 20 -   6120653 C--------A--------GTT--CCAT----GAA------------TGTTA-GA--C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080073 19 +  43346337 A--------T--------ATT---TAT----GTG------------TGCTG-CA--C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613714 18 +  59628241 A--------T--------ATT---CAT----ATg------------tactg-ca---
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44335 19 -     61512 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 371997 19 -  60120075 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24260 19 +     30207 G--------T--------ACT---TAC----GTG------------TGTTG-TA--C
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21363 19 -     24934 G--------T--------ACT---TAC----GTG------------TGTTG-TA--C
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24213 19 +     30527 G--------T--------ACT---TAC----GTG------------TGTTG-TA--C
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35389 19 -     50087 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45133 19 +     51645 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414336 19 - 187317192 G--------T--------ACT---TAC----GTG------------TGTTG-TA--C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398566 19 +  25927173 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47738 19 -     62418 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  276 19 +     14901 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44210 19 +     59329 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270118 19 +    668171 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  394 19 +      1732 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1916 19 +     17132 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222283 19 -    270270 A--------C--------ATT---CAT----GCG------------TACCA-TA--C
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                        321415 19 +  24302211 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356247 19 -    752769 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672603 16 -    737560 a--------t--------att---cat----gtg------------TACTA------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219887 16 +    317179 a--------t--------att---cat----atg------------tACTG------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500123 19 +  40650429 A--------T--------ATT---CAT----GTG------------TACTC-TA--C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149442 19 +    207569 A--------T--------ATT---CAT----GTG------------TACTG-TG--C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_19308             25263 18 -     74585 A--------T--------GTT---CAT----ATG------------TACTG-TG---
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 2
s Meriones_unguiculatus.MerUng_scaffold_7390                 49212 19 -    140813 A--------T--------ATT---CAA----ATG------------CTCTG-TA--C
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428312 15 +  29670104 --------------------C---CCT----ATG------------TATTG-TA--A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80273 19 +     93471 A--------T--------ATT---CAT----GTG------------TACTG-CA--C
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 2
s Mico_argentatus.k141_582562                                 9368 19 +     17804 G--------T--------ACT---TAC----ATA------------TATTG-TA--C
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9870 19 -     12984 G--------T--------ACT---TAC----ATA------------TATTG-TA--C
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18184 19 -     26561 G--------T--------ACT---TAC----ATA------------TATTG-TA--C
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983661 19 +  93316391 A--------T--------ATT---AAT----GTG------------CATTA-TA--C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44831 19 +    145209 A--------C--------ATT---TAT----GTA------------TATTA-TA--C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184206 19 +    200668 A--------T--------ATT---CAC----GCA------------TAGGA-CA--C
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 1
s Microtus_ochrogaster.CM001695.1                         15961524 19 +  27267610 A--------T--------ATT---CAT----ATG------------CATTG-TA--C
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362309 19 -   8254450 a--------t--------att---tat----gca------------tatta-ca--t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_23309             41210 19 -     48117 A--------T--------ATT---TAT----GCA------------TATTA-CA--T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 1
s Miopithecus_ogouensis.k141_1534655                         21423 19 -     27822 G--------T--------ACT---TAC----GTG------------TGTTG-TA--C
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7581 21 +     27589 A--------T--------GTT---CAT----ATG------------TACTG-TATCT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51450 19 -     62432 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352165 19 +    437263 A--------T--------ATT---CAT----GGG------------TAGTG-CA--C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178369 19 +    366855 A--------T--------ATT---CAC----GCA------------TACTA-CA--C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_13123                  23373 19 -     82753 A--------T--------ATT---CAC----ATG------------TACTG-CA--C
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 1233
s Mungos_mungo.MunMun_flattened_line_18455                   17587 21 -     63510 A--------T--------ATT---CAT----ATG------------CACTG-GACCT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38249 19 +     47283 A--------T--------ATT---CAT----GCA------------TACTA-CA--A
i Murina_feae.MurFea_scaffold_17764                      C 0 I 1
s Mus_caroli.LT608237.1                                   35592253 19 + 120012414 A--------T--------ATC---CAC----ATG------------CACAG-TG--C
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686638 19 + 129401213 A--------T--------ATC---CAC----ATG------------CACGG-TG--C
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216495 19 +  89631738 A--------T--------ATC---CGC----ATG------------CACAG-TG--C
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495934 19 + 130317789 A--------T--------ATC---CAC----ATG------------CACAG-TG--C
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81933 19 -     86153 A--------T--------ATT---CAA----GTT------------TACTG-TA--A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354193 18 +  14710649 A--------T--------GTT---CAC----ATG------------tactg-tg---
i Mustela_putorius.JH418006.1                            C 0 I 2
s Myotis_brandtii.KE162005.1                               9792499 19 +  10118263 A--------T--------ATT---CAT----GCA------------TActa-ca--a
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                4386659 19 +   6019432 A--------T--------ATT---CAT----GCA------------TACTA-CA--A
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                               382478 19 +   4330536 A--------T--------ATT---CAT----GCA------------TACTA-CA--A
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_66571                         1306 19 +     18357 A--------T--------ATT---CAT----GCA------------TACTA-CA--A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118672 19 +    130748 A--------T--------ATT---CAT----GTG------------TACTG-CA--T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945205 19 +   3037898 A--------C--------ATG---CAT----ATC------------TAATG-TA--T
i Nannospalax_galili.KL204047.1                          I 46 C 0
s Nasalis_larvatus.k141_1350636                              28074 19 +     34575 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468176 21 -  31847680 A--------T--------GTT---CAT----ATG------------tactg-tatct
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226334 19 -   7148211 A--------T--------ATT---CAT----GGG------------TAGtg-ca--c
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_7894                   127076 19 -    149072 A--------T--------AAT---CAT----GCA------------TACTA-Ca--c
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 1
s Nomascus_annamensis.k141_1771965                           52816 19 -    132029 G--------T--------ACT---TAC----ATG------------CATTG-TA--T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8911 19 -     16345 G--------T--------ACT---TAC----ATG------------CATTG-TA--T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14796 19 +     22201 G--------T--------ACT---TAC----ATG------------CATTG-TA--T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413017 19 -  22158432 G--------T--------ACT---TAC----ATG------------CATTG-TA--T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25194 19 -     54323 G--------T--------ACT---TAC----ATG------------CATTG-TA--T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197307 18 +   9404916 A--------T--------ATT---CAT----ATg------------tactg-ca---
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635655 28 + 196305487 CTGCCTTGAA--------GTT--CCAC----GAG------------TGTTA-GA--C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2413 28 -      3937 CTGCCTTGAA--------GTT--CCAT----GAG------------TGTTA-GA--C
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563920 28 - 199412804 CTGCCTTGAA--------GTT--CCAT----GAG------------TGTTA-GA--C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550267 19 -   3988456 A--------T--------ATT---CAT----GGA------------TACTA-TA--G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053719 27 -  11899542 A--------TACTGAAATACT---CAT----ATG------------TACTG-TA--T
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450772 22 +   2017862 A--------T--------GTT---CAT----ATG------------Tactcttatct
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435209 19 -    630418 A--------T--------ATT---CAT----GTG------------TATTg-ca--t
i Odocoileus_virginianus.KZ100018.1                      C 0 I 162
s Okapia_johnstoni.LVCL01S0005463.1                          13208 19 +    150152 A--------T--------CTT---CGT----GTG------------TACTG-ca--c
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 160
s Ondatra_zibethicus.OndZib_scaffold_7387                    91860 19 -    140218 A--------T--------ATC---CGT----ATG------------CATTG-TA--C
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2754 19 -     41509 A--------C--------ATT---CAT----ATG------------TATCA-TA--T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095604 19 +  10937097 A--------T--------ATT---CAT----GGG------------TAGtg-ca--c
i Orcinus_orca.KB316932.1                                C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_171931              12712 19 -     14239 A--------T--------ATT---TAT----GAA------------TGCTG-CA--C
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102736 19 - 174332312 A--------T--------ATT---CAT----GGA------------TATta-ta--c
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38353 18 +    559221 A--------T--------ATT---CAT----ATg------------tactg-ca---
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39032 20 -     51505 C--------A--------GTT--CCAT----GAG------------TGTTA-GA--C
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352035 20 +   1103335 C--------A--------GTT--CCAT----GAG------------TGTTA-GA--C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403198 19 -  44047080 A--------T--------ATT---CAT----ATG------------TACTg-ca--t
i Ovis_aries.CM001607.2                                  C 0 I 163
s Ovis_canadensis.OviCan_scaffold_67953                       3717 19 +     17875 A--------T--------ATT---CAT----ATG------------TACTG-CA--T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 163
s Pan_troglodytes.CM009242.2                               1471910 19 - 189151597 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23516 21 -    230217 A--------T--------ATT---CAT----ATG------------CACTG-GACCT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460842 21 -  18783137 A--------T--------ATT---CAT----ATG------------CACTG-GACCT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971562 21 +   8748460 A--------T--------ATT---CAT----ATG------------CACTG-GACCT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614640 19 +   2937107 A--------T--------ATT---CAT----ATG------------TACtg-ca--c
i Pantholops_hodgsonii.KE114653.1                        C 0 I 159
s Papio_anubis.CM001495.2                                   242248 19 - 183742232 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8710 19 +     21308 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291284 19 -  20919399 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21358 19 -     27687 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14504 19 +     16796 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21315 19 -     23640 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14158 33 +     78924 A--------T--------ATT---CAT----ATTCCTTTTTAAAGGAACTG-GACCT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25445 20 +     31479 C--------A--------GTT--CCAT----AAG------------TGTTA-GA--T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17814 20 -     24908 C--------A--------GTT--CCAT----AAG------------TGTTA-GA--T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         877 10 +      9367 --------------------------------TA------------TATTG-TA--C
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245950 19 +  18517816 A--------C--------ATT---CAT----ATG------------TGTCG-TA--C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11459 19 -     15039 A--------T--------ATT---CAT----GGG------------TAGTG-CA--C
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 I 2
s Piliocolobus_badius.k141_2704958                            1522 19 +     55023 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1072 19 -     89929 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1661 19 +     40849 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253325 19 +  14605196 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2832 19 +     22231 A--------T--------ATT---CAT----GCA------------TACTA-CA--A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 1
s Pithecia_albicans.k141_1239476                             63966 19 +    207309 G--------T--------ACT---TAC----ATG------------TATTG-CA--C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5059 19 -     25401 G--------T--------ACT---TAC----ATG------------TATTG-CA--C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30802 19 +     58159 G--------T--------ACT---TAC----ATG------------TATTG-CA--C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31078 19 +     63561 G--------T--------ACT---TAC----ATG------------TATTG-CA--C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30838 19 +     51148 G--------T--------ACT---TAC----ATG------------TATTG-CA--C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555808 19 -   4542175 G--------T--------ACT---TAC----ATG------------TATCG-CA--C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30822 19 +     51125 G--------T--------ACT---TAC----ATG------------TATTG-CA--C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3546 19 -      8168 A--------T--------ATT---CAC----GTG------------TACTG-CA--C
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 I 2
s Plecturocebus_bernhardi.k141_2549090                        7225 19 +     39866 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2309 19 -      9282 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41713 19 -     87950 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42107 19 -     88961 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6805 19 -     39403 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41756 19 +     87928 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6802 19 -     60166 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13739 19 -     67232 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41655 19 -     90634 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43122 19 +     89403 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177034 19 - 189387572 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191851 19 -   9816681 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26657 19 +     69807 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43853 19 -     80239 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2385 17 +      3019 G--------T--------GTT---T------GTG------------GGCTG-CA--C
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981678 19 +   4620579 A--------T--------ATT---AAT----GTG------------TATTA-TA--T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565145 19 -   2598838 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2781 19 -      7103 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3378 19 -     11706 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7114 19 -     30655 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33439 19 +     46564 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93710 19 -     98465 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7347 19 +     35169 A--------T--------ATT---AAT----GTG------------TATTA-TA--C
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36553 19 +     52041 A--------T--------ATT---CAT----ATG------------CTCTG-TA--C
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51252 19 -     66298 A--------T--------ATT---CAT----GCA------------TACTG-CA--C
i Pteronotus_parnellii.KE847780.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3762 18 -     18639 A--------T--------GTT---CAT----ATG------------TACTG-TG---
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 2
s Pteropus_alecto.KB030862.1                               5839969 19 -  28871421 A--------C--------ATT---CAT----GCA------------TAcca-ta--t
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN525825.1                             3536478 19 -   4952924 A--------C--------ATT---CGT----GCA------------TACca-ta--a
i Pteropus_vampyrus.KN525825.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            18098156 21 +  38429054 A--------T--------ATT---CAT----ATG------------CACTG-GACCT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26031 19 +     91421 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152523 19 -   7812017 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6898 19 +     72585 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52128 19 +     55069 A--------T--------ATT---CAT----GTG------------TACTG-CA--T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 162
s Rattus_norvegicus.chr16                                 37021851 19 -  90668790 A--------T--------ATT---CAT----ATG------------CACAG-TA--C
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913863 19 +   3329780 A--------T--------ATT---CAT----GTA------------TACTA-CA--C
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 1
s Rhinopithecus_bieti.k119_778604                              603 19 +      7119 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121211 19 + 195417433 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235453 19 -   7961872 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73877 19 -    116970 A--------C--------ATT---CAT----GCG------------TACCA-TA--C
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 1
s Saguinus_bicolor.k141_1429097                               3105 19 +     27962 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3000 19 +      6077 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3091 19 +      5971 G--------T--------AGT---TAC----ATG------------TATTG-TA--T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3013 19 +      5932 G--------T--------AGT---TAC----ATG------------TATTG-TA--C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1355 19 -      4390 G--------T--------AGT---TAC----ATG------------TATTG-TA--T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390790 19 - 209938924 G--------T--------ACT---TAC----ATG------------TATTG-TA--G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2962 19 +      5979 G--------T--------AGT---TAC----ATG------------TATTG-TA--C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3724 19 -      4301 G--------T--------ACT---TAC----ATG------------TATTG-TA--C
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6790 19 +     16473 A--------T--------ATT---CAT----ATG------------TACTG-CA--C
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 163
s Saimiri_boliviensis.NW_024100920.1                       1108131 15 + 121099817 --------------------T---TAC----GTA------------TATTG-TA--C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29694 19 -     47369 --------------------T---TACTTACGTA------------TATTG-TA--C
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30080 19 -     79414 --------------------T---TACTTACGTA------------TATTG-TA--C
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26771 19 -     34454 --------------------T---TACTTACGTA------------TATTG-TA--C
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14178 15 -     22428 --------------------T---TAC----GTA------------TATTG-TA--C
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29326 19 -     47109 --------------------T---TACTTACGTA------------TATTG-TA--C
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237384 19 +   5703754 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6974 19 +     21866 G--------T--------ACT---TAC----GTG------------TATTG-TA--C
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115080  7 +    313613 A--------T--------ATT---CA-------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24350 19 +     27374 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27864 19 +     58920 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14360 19 -     45317 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22019 19 -     42441 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24697 19 -     29113 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27771 19 -     48123 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48326 19 +     77746 A--------T--------ATT---CAC----ATG------------TATTG-TA--C
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857387 19 -   1910179 A--------A--------ATT---CAT----GTG------------TACTC-TA--C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867483 19 +   3870691 A--------T--------ATT---CAT----GTG------------TACTC-TA--C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5751 21 -     97271 A--------T--------GTT---CAT----ATG------------TACTG-CACCT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             123991 21 +    196729 A--------T--------ATT---CAT----ATG------------TACTG-GACCT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390278 19 +   1523678 G--------T--------ACT---TAC----ATG------------CATTG-TA--T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13236 19 +     22964 A--------T--------ATT---CAT----GCA------------TACCA-CA--C
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_224794                1788 19 +      5583 A--------T--------ATT---CAT----GTG------------TACTG-CT--T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190685 21 +    199430 A--------T--------ATT---CAT----GCA------------TACTG-CACCT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104637 21 -    539355 A--------T--------ATT---CAT----GCA------------TACTG-CACCT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5971 18 +      6850 A--------T--------ACT---CAT----GTG------------TAT-G-TG--C
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6022 18 +     20590 A--------T--------ATT---CAT----GTG------------TAT-G-TG--C
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352234 19 - 186847797 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18893 18 -     31044 A--------T--------ATT---CAT----GT-------------TACTG-CA--T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479280 19 -    610378 A--------T--------ATT---CAT----GCA------------TAGGA-CA--C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_1189070                        19896 19 +     26378 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32574 19 -     78344 G--------T--------ACT---TGT----GTG------------TGTTG-TA--C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19221 19 +     25722 G--------T--------ACT---TAT----GTG------------TGTTA-TA--C
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27526 19 -     62838 G--------T--------ACT---TGT----GTG------------TGTTG-TA--C
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27572 19 +     46913 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8381 19 -     28527 G--------T--------ACT---TGT----GTG------------TGTTG-TA--C
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29463 19 -     64340 G--------T--------ACT---TGT----GTG------------TGTTG-TA--C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27500 19 -     63452 G--------T--------ACT---TGT----GTG------------TGTTG-TA--C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8945 19 +     22490 G--------T--------ACT---TGT----GTG------------TGTTG-TA--C
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2371 19 -      6147 G--------T--------ACT---TGT----GTG------------TGTTG-TA--C
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9276 19 -     13050 G--------T--------ACT---TGT----GTG------------TGTTG-TA--C
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254516 19 -   6242583 G--------T--------ACT---TGT----GTG------------TGTTG-TA--C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         540 19 +     19340 G--------T--------ACT---TAT----GTG------------TGTTG-TA--C
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172404 19 -    200418 A--------T--------AGT---CAT----GTG------------TATAG-CT--C
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 164
s Trichechus_manatus.JH594705.1                            6479533 19 -  10818551 A--------T--------GTT---TAC----GTG------------TGCTG-CA--C
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832917 19 -   4065304 A--------T--------ATT---TAT----GTG------------TACTG-TA--A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7186 18 -     70247 ---------T--------ATT---TAT----GTG------------TACTG-TA--A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360339 19 -  33153633 A--------T--------ATT---CAT----GGG------------TAGTG-CA--C
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_46687                    2831  7 -     21056 A--------T--------ATT---CA-------------------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180930 21 +   5085361 A--------T--------GTT---CAT----ATG------------Tactg-tacct
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24322 19 -     30710 A--------T--------ATT---AAT----GTG------------TATTC-TA--C
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23229 19 -    147434 A--------T--------ATT---AAT----GTG------------TATTC-TA--C
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75414 19 +   5488506 a--------t--------att---tat----gtg------------tactg-ca--c
i Vicugna_pacos.KN270157.1                               C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_12041                104075 18 -    112863 A--------T--------ATT---CAT----ACG------------TACTG-CA---
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173262 19 -    224448 A--------T--------ATT---CAT----GTG------------TACCC-TA--C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27968 21 -     86975 A--------T--------GTT---CAT----ATG------------TACTG-TATCT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       266 18 -       753 A--------T--------ATT----AT----GTG------------CACTG-TG--C
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
e Sorex_araneus.JH798187.1                                 4669981 82 +  18376816 I
e Crocidura_indochinensis.CroInd_scaffold_77846               6137 25 +     12657 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4586 4 +     36723 C---T-T-T
s Acinonyx_jubatus.LLWD01001279.1                           811916 3 +   1699592 T---T-T--
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24234 5 +     63021 C---T-TCT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414445 3 +  29979442 t---t-t--
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214755 4 +    347723 t--tt-t--
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17176 4 -     61208 C---T-T-T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46902 4 +     53615 C---T-T-T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42863 4 +     44087 C---T-T-T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15488 4 -     21945 C---T-T-T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17171 4 +     32033 C---T-T-T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71342 4 -     84148 C---T-T-T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43581 4 -     78289 C---T-T-T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43020 4 +     55831 C---T-T-T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41470 4 -     64179 C---T-T-T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23109 4 -     24835 C---T-T-T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40095 4 +     45454 C---T-T-T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45741 4 +     70886 C---T-T-T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7917 4 +     30854 C---T-T-T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32053 4 +     42133 C---T-T-T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584441 3 +   2318259 T---C-T--
i Ammotragus_lervia.NIVO01071767.1                       I 163 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176258 3 -    412891 T---T-T--
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49539 3 -     68529 T---T-T--
i Antilocapra_americana.AntAmePen_scaffold_21030         I 162 C 0
s Aotus_azarae.k141_887050                                     296 4 +     17741 C---T-T-T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              921 4 -     15923 C---T-T-T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1196 4 -     16391 C---T-T-T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                756 4 -     17186 C---T-T-T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15140 4 -     32367 C---T-T-T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18678 4 -     45910 G---T-T-C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4537 3 -     15198 T---T-T--
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 1 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273805 4 +  21539123 C---T-T-T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9972 4 +     48076 C---T-T-T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5109 4 -     28759 C---T-T-T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32662 4 +     44353 C---T-T-T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48032 4 -     71267 C---T-T-T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22091 4 -     33135 C---T-T-T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5280 4 +     11645 C---T-T-T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5286 4 -     19611 C---T-T-T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956114 3 -  23207421 t---t-t--
i Balaenoptera_acutorostrata.KI537508.1                  I 2 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3323 3 -      4711 t---t-t--
i Balaenoptera_bonaerensis.DF507193.1                    I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85432 3 +    124022 T---C-T--
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 163 C 0
s Bison_bison.KN261452.1                                     20964 3 +    288883 T---C-T--
i Bison_bison.KN261452.1                                 I 158 C 0
s Bos_indicus.CM003047.1                                  20355350 3 +  48749331 T---C-T--
i Bos_indicus.CM003047.1                                 I 157 C 0
s Bos_mutus.JH880303.1                                      753918 3 +   1948126 T---C-T--
i Bos_mutus.JH880303.1                                   I 157 C 0
s Bos_taurus.CM000203.6                                   27544057 3 -  45695690 T---C-T--
i Bos_taurus.CM000203.6                                  I 157 C 0
s Bubalus_bubalis.KI419123.1                               1529082 3 -   4408762 T---C-T--
i Bubalus_bubalis.KI419123.1                             I 158 C 0
s Cacajao_ayresi.k141_96119                                   6978 4 +     28062 T---T-T-T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42272 4 -     91139 T---T-T-T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19798 4 +     95584 T---T-T-T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19711 4 +    119600 T---T-T-T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9278 4 +     18648 C---T-T-T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8817 4 -     13885 C---T-T-T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             883 4 -      8861 C---T-T-T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453276 4 + 189096842 C---T-T-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                798 4 +      8664 C---T-T-T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630101 3 +  17673402 t---t-t--
i Camelus_bactrianus.KN276810.1                          I 2 C 0
s Camelus_dromedarius.KN272107.1                           4664387 3 +   7040546 t---t-t--
i Camelus_dromedarius.KN272107.1                         I 2 C 0
s Camelus_ferus.KB017975.1                                 1208047 3 +   1652518 t---t-t--
i Camelus_ferus.KB017975.1                               I 2 C 0
s CanFam4.chr16                                           42504463 2 +  60362399 ----T-T--
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8099 2 -     23171 ----T-T--
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221442 2 +   9314153 ----t-t--
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614577 2 +  59632846 ----t-t--
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106158 2 -  63665305 ----t-t--
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408153 3 -  46296322 T---C-T--
i Capra_aegagrus.CM003241.1                              I 163 C 0
s Capra_hircus.CM004588.1                                 26590426 3 +  44709034 T---C-T--
i Capra_hircus.CM004588.1                                I 163 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    618 4 -      1880 A---T-C-T
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269365 4 +    496798 C---T-T-T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                472 3 -      1021 T---T-T--
i Carollia_perspicillata.CarPer_scaffold_668536          I 20 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26781 4 -     39886 C---T-C-T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78402 3 -    217609 T---T-T--
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995507 4 +  23392119 a---t-t-t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998949 4 +  23407841 a---t-t-t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62030 4 -     66877 A---T-T-T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4196 4 -     12580 C---T-T-T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42254 4 +     53515 C---T-T-T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370185 4 -  26074798 C---T-T-T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7074 4 -     34880 C---T-T-T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66169 4 -     89041 C---T-T-T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1294 4 -      5494 C---T-T-T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491252 3 -  27778364 T---T-T--
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18085 3 +     27315 T---T-T--
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140085 4 -   4669795 C---T-T-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43827 4 +     47900 C---T-T-T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43654 4 -     44860 C---T-T-T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43640 4 -    148725 C---T-T-T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25857 4 -     40656 C---T-T-T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5823 4 +     20796 C---T-T-T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10900 4 -     17524 C---T-T-T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26622 4 -     34525 C---T-T-T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10443 4 -     25376 C---T-T-T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363043 4 -  39242232 C---T-T-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268755 4 +  21565898 C---T-T-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31089 4 -     45857 C---T-T-T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26028 4 -     32606 C---T-T-T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2187 4 +      8499 C---T-T-T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24585 4 +     70610 C---T-T-T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21514 4 +     36323 C---T-T-T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11879 5 -     19938 C---TTC-T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29698 4 -     33796 C---T-T-T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4215 4 -     15404 C---T-T-T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8076 4 -     32913 C---T-T-T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18489 4 -     40346 C---T-T-T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18744 4 +    216457 C---T-T-T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18537 4 +     39636 C---T-T-T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237943 4 -   2543920 a---t-t-t
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3126 4 +      5346 C---T-T-T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41609 4 -    112038 C---T-T-T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7180 4 +     34062 C---T-T-T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342405 4 +  18827391 C---T-T-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8952 4 -     44032 C---T-T-T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303729 4 - 135778131 C---T-T-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13848 5 +     15858 C---CCC-T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605424 5 -    839153 C---CCC-T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408167 4 -   2368649 A---T-T-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378042 4 - 200372422 A---T-T-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1591 4 -     84244 A---T-T-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1874 3 -      8242 C---T-T--
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43405 4 -     83289 C---T-T-T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113811 5 - 224834208 C---A-TCT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3368 3 +     87169 T---T-T--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644080 4 -   1526836 C---T-T-T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16926 4 +     50838 A---T-T-T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3391 4 +     36344 A---T-T-T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27190 4 +     75252 A---T-T-T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109223 5 -   2246927 C---TTC-T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291627 4 +  12879189 C---T-T-T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624443 3 -  35494412 t---t-t--
i Delphinapterus_leucas.KZ290073.1                       I 2 C 0
s Desmodus_rotundus.KZ672289.1                            11864280 3 -  20541912 T---T-T--
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663543 3 -   1390856 T---T-T--
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138329 3 -    198055 T---T-T--
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97933 4 -    115145 A---T-T-T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949555 4 -  37912305 T---T-T-T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4490 4 -     10735 T---T-T-T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9451 4 +     14636 A---T-T-T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5339 3 +     19438 t---t-t--
i Eidolon_helvum.AWHC01266696.1                          I 1 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238814 3 -    607251 t---t-t--
i Elaphurus_davidianus.JRFZ01104969.1                    I 157 C 0
s Elephantulus_edwardii.JH947257.1                         9107618 5 -  10337057 C---CCA-T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30095 5 +    110024 C---T-TCC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12081 5 +     18970 C---T-TCC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915179 4 +  41312741 t--tt-t--
i Enhydra_lutris.KZ291758.1                              I 2 C 0
s Eptesicus_fuscus.JH977646.1                             12577911 3 +  14770903 T---T-T--
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              3040140 3 -   4378816 t---t-t--
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374064 3 +  39960074 t---t-t--
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410850 3 -    498745 t---t-t--
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3664898 2 +   7059049 ----T-T--
i Erinaceus_europaeus.JH835339.1                         I 2 C 0
s Erythrocebus_patas.Contig38                               261932 4 +  21539334 C---T-T-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63993 3 -    133382 T---T-T--
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4210 3 +      7672 T---T-T--
i Eubalaena_japonica.EubJap_flattened_line_118172        I 2 C 0
s Eulemur_albifrons.k141_51491                               13824 4 -     24895 C---T-T-T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41533 4 -     70999 C---T-T-T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85495 4 +    112731 C---T-T-T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42064 4 +     68309 C---T-T-T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52390 4 -     65740 C---T-T-T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23019 4 -     75513 C---T-T-T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47216 4 -     97555 C---T-T-T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3941 4 +     30972 C---T-T-T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41661 4 -     52037 C---T-T-T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58063 4 -    111500 C---T-T-T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245825 3 - 206538554 T---T-T--
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115611 3 - 205367284 T---T-T--
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26712 3 -     30238 T---T-T--
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123892 4 -    137831 C---t-t-c
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7437 4 +     22493 C---t-t-c
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19494 4 -     32986 c---t-t-t
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 224 4 -     28519 C---T-T-T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90503 3 -     95226 T---T-T--
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 160 C 0
s Glis_glis.GliGli_scaffold_33859                            33349 4 -     36801 C---T-T-T
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4888 4 -      8343 C---T-T-T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253900 4 - 186649187 C---T-T-T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     845 4 -     78134 C---T-T-T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13749 4 -     40692 C---T-T-T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35151 4 +     49394 C---T-T-T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60019 4 -     66874 C---T-T-T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8893 4 -     42923 C---T-T-T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15893 4 -     53142 C---T-T-T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29855 3 -    327341 T---T-T--
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8260 3 +     48891 T---C-T--
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 163 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6016 5 +      6687 T---TCT-T
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6703 3 -     36432 T---T-T--
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49865 3 +     49977 C---T-T--
i Hipposideros_galeritus.HipGal_scaffold_23202           I 1 C 0
s Hoolock_leuconedys.ctg274                                    141908 4 -    630532 C---T-T-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68772 3 +     83186 T---T-T--
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70912 4 +    143317 A---T-T-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4943 4 +     12352 C---T-T-T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12127 4 +     55766 C---T-T-T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051725 4 + 191637585 C---T-T-T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800603 4 +  11177569 C---T-T-T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3550 4 -    135385 A---T-T-T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385922 4 +   7955117 C---T-T-T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1403 4 +     11955 C---T-T-T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2230 3 -     16823 T---T-T--
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 2 C 0
s Jaculus_jaculus.JH725527.1                               1238735 4 +   9596543 C---T-T-T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64709 3 -     97402 T---T-T--
i Kogia_breviceps.KogBre_flattened_line_3970             I 2 C 0
s Lagothrix_lagothricha.k141_246028                          42348 4 +    110728 C---T-T-T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61771 3 -     65777 T---T-T--
i Lasiurus_borealis.LasBor_scaffold_16567                I 1 C 0
s Lemur_catta.scaffold_24                                 14758542 4 +  30322482 C---T-T-T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3262 4 -     13097 C---T-T-T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3016 4 +      5940 C---T-T-T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2846 4 -      5717 C---T-T-T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9222 4 -     11567 C---T-T-C
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10603 4 -     12945 C---T-T-C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8071 4 +     29618 C---T-T-T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8067 4 +     31569 C---T-T-T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8077 4 +     24756 C---T-T-T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8077 4 +     16388 C---T-T-T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812594 4 -   3914936 t---ttt--
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16919 4 +     24238 C---T-T-T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 3
s Lipotes_vexillifer.KE559953.1                             333750 3 +    662738 t---t-t--
i Lipotes_vexillifer.KE559953.1                          I 2 C 0
s Lophocebus_aterrimus.ctg367                               332970 4 -   1826925 C---T-T-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9655 4 +     19643 C---T-T-C
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043312 4 -   6120653 C---T-T-C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080092 5 +  43346337 C---TCT-T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613732 2 +  59628241 ----t-t--
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44354 4 -     61512 C---T-T-T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372016 4 -  60120075 C---T-T-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24279 4 +     30207 C---T-T-T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21382 4 -     24934 C---T-T-T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24232 4 +     30527 C---T-T-T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35408 4 -     50087 C---T-T-T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45152 4 +     51645 C---T-T-T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414355 4 - 187317192 C---T-T-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398585 4 +  25927173 C---T-T-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47757 4 -     62418 C---T-T-T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  295 4 +     14901 C---T-T-T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44229 4 +     59329 C---T-T-T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270137 4 +    668171 C---T-T-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  413 4 +      1732 C---T-T-T
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1935 4 +     17132 C---T-T-T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222303 3 -    270270 T---T-T--
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                        321434 4 +  24302211 C---T-T-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356266 4 -    752769 C---T-T-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500142 4 +  40650429 C---T-T-T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149462 3 +    207569 C---T-T--
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25283 4 -     74585 TT--T-T--
i Mellivora_capensis.MelCap_flattened_line_19308         I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49231 5 -    140813 C---T-TCT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428327 5 +  29670104 C---T-TCT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80294 3 +     93471 T---T-T--
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 2 C 0
s Mico_argentatus.k141_582562                                 9387 4 +     17804 C---T-T-T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9889 4 -     12984 C---T-T-T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18203 4 -     26561 C---T-T-T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983680 4 +  93316391 C---T-T-T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44850 5 +    145209 C---CCT-T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184226 3 +    200668 T---T-T--
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 1 C 0
s Microtus_ochrogaster.CM001695.1                         15961543 5 +  27267610 C---T-TCC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362329 3 -   8254450 t---t-t--
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41230 3 -     48117 T---T-T--
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         21442 4 -     27822 C---T-T-T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7602 3 +     27589 T---T-T--
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51469 4 -     62432 C---T-T-T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352186 3 +    437263 T---T-T--
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178389 3 +    366855 T---T-T--
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24625 3 -     82753 T---C-T--
i Moschus_moschiferus.MosMos_scaffold_13123              I 1233 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17608 3 -     63510 T---T-T--
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38269 3 +     47283 T---T-T--
i Murina_feae.MurFea_scaffold_17764                      I 1 C 0
s Mus_caroli.LT608237.1                                   35592272 5 + 120012414 C---T-TCT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686657 5 + 129401213 C---T-TCT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216514 5 +  89631738 C---T-TCT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495953 5 + 130317789 C---T-TCT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81952 4 -     86153 T---T-T-T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354213 4 +  14710649 t--tt-t--
i Mustela_putorius.JH418006.1                            I 2 C 0
s Myotis_brandtii.KE162005.1                               9792519 3 +  10118263 t---t-t--
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                4386679 3 +   6019432 T---T-T--
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                               382498 3 +   4330536 T---T-T--
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1326 3 +     18357 T---T-T--
i Myotis_myotis.MyoMyo_scaffold_66571                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118691 5 +    130748 G---TCT-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945224 4 +   3037898 A---T-T-T
i Nannospalax_galili.KL204047.1                          C 0 I 81
s Nasalis_larvatus.k141_1350636                              28093 4 +     34575 A---T-T-T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468197 3 -  31847680 t---t-t--
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226355 3 -   7148211 t---t-t--
i Neophocaena_asiaeorientalis.KZ687982.1                 I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127096 3 -    149072 t---t-t--
i Noctilio_leporinus.NocLep_scaffold_7894                I 1 C 0
s Nomascus_annamensis.k141_1771965                           52835 4 -    132029 C---T-T-T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8930 4 -     16345 C---T-T-T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14815 4 +     22201 C---T-T-T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413036 4 -  22158432 C---T-T-T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25213 4 -     54323 C---T-T-T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197325 2 +   9404916 ----t-t--
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635683 4 + 196305487 C---T-T-C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2441 4 -      3937 C---T-T-C
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563948 4 - 199412804 C---T-T-C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550286 4 -   3988456 C---T-T-T
i Ochotona_princeps.JH802162.1                           C 0 I 3
s Octodon_degus.JH651603.1                                11053746 4 -  11899542 G---T-T-T
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450794 3 +   2017862 t---t-t--
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435390 3 -    630418 T---T-T--
i Odocoileus_virginianus.KZ100018.1                      I 162 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13387 3 +    150152 T---T-T--
i Okapia_johnstoni.LVCL01S0005463.1                      I 160 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91879 5 -    140218 C---T-TCT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2773 5 -     41509 C---T-TCT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095625 3 +  10937097 t---t-t--
i Orcinus_orca.KB316932.1                                I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12731 5 -     14239 C---CCT-T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102755 4 - 174332312 c---t-t-t
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 3
s Otocyon_megalotis.JAEUCK010005147.1                        38371 2 +    559221 ----t-t--
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39052 4 -     51505 C---t-t-c
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352055 4 +   1103335 C---T-T-C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403380 3 -  44047080 T---C-T--
i Ovis_aries.CM001607.2                                  I 163 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3899 3 +     17875 T---C-T--
i Ovis_canadensis.OviCan_scaffold_67953                  I 163 C 0
s Pan_troglodytes.CM009242.2                               1471929 4 - 189151597 C---T-T-T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23537 3 -    230217 T---T-T--
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460863 3 -  18783137 T---T-T--
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971583 3 +   8748460 T---T-T--
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614818 3 +   2937107 T---C-T--
i Pantholops_hodgsonii.KE114653.1                        I 159 C 0
s Papio_anubis.CM001495.2                                   242267 4 - 183742232 C---T-T-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8729 4 +     21308 C---T-T-T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291303 4 -  20919399 C---T-T-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21377 4 -     27687 C---T-T-T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14523 4 +     16796 C---T-T-T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21334 4 -     23640 C---T-T-T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14191 3 +     78924 T---T-T--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25465 4 +     31479 G---T-T-C
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17834 4 -     24908 G---T-T-C
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         887 4 +      9367 A---T-T-T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245969 5 +  18517816 C---T-TCT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11480 3 -     15039 T---T-T--
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 2 C 0
s Piliocolobus_badius.k141_2704958                            1541 4 +     55023 A---T-T-T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1091 4 -     89929 A---T-T-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1680 4 +     40849 A---T-T-T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253344 4 +  14605196 A---T-T-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2852 3 +     22231 T---T-T--
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 1 C 0
s Pithecia_albicans.k141_1239476                             63985 4 +    207309 C---T-T-T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5078 4 -     25401 C---T-T-T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30821 4 +     58159 C---T-T-T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31097 4 +     63561 C---T-T-T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30857 4 +     51148 C---T-T-T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555827 4 -   4542175 C---T-T-T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30841 4 +     51125 C---T-T-T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3567 3 -      8168 T---T-T--
i Platanista_gangetica.PlaMin_flattened_line_167872      I 2 C 0
s Plecturocebus_bernhardi.k141_2549090                        7244 4 +     39866 C---T-T-T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2328 4 -      9282 C---T-T-T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41732 4 -     87950 C---T-T-T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42126 4 -     88961 C---T-T-T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6824 4 -     39403 C---T-T-T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41775 4 +     87928 C---T-T-T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6821 4 -     60166 C---T-T-T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13758 4 -     67232 C---T-T-T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41674 4 -     90634 C---T-T-T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43141 4 +     89403 C---T-T-T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177053 4 - 189387572 C---T-T-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191870 4 -   9816681 C---T-T-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26676 4 +     69807 A---T-T-T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43872 4 -     80239 A---T-T-T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2402 5 +      3019 T---TCT-T
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981697 4 +   4620579 C---T-T-T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565164 4 -   2598838 C---T-T-T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2800 4 -      7103 C---T-T-T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3397 4 -     11706 C---T-T-T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7133 4 -     30655 C---T-T-T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33458 4 +     46564 C---T-T-T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93729 4 -     98465 C---T-T-T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7366 4 +     35169 C---T-T-T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36572 5 +     52041 C---T-TCT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51272 3 -     66298 T---T-T--
i Pteronotus_parnellii.KE847780.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3782 4 -     18639 TT--T-T--
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 2 C 0
s Pteropus_alecto.KB030862.1                               5839989 3 -  28871421 t---t-t--
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             3536498 3 -   4952924 t---t-t--
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            18098177 3 +  38429054 T---T-T--
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26050 4 +     91421 A---T-T-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152542 4 -   7812017 A---T-T-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6917 4 +     72585 A---T-T-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52309 3 +     55069 T---T-T--
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 162 C 0
s Rattus_norvegicus.chr16                                 37021870 5 -  90668790 C---T-TCT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913883 3 +   3329780 C---T-T--
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_778604                              622 4 +      7119 A---T-T-T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121230 4 + 195417433 A---T-T-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235472 4 -   7961872 A---T-T-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73897 3 -    116970 T---T-T--
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 1 C 0
s Saguinus_bicolor.k141_1429097                               3124 4 +     27962 C---T-T-T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3019 4 +      6077 C---T-T-T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3110 4 +      5971 C---T-T-T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3032 4 +      5932 C---T-T-T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1374 4 -      4390 C---T-T-T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390809 4 - 209938924 C---T-T-T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2981 4 +      5979 C---T-T-T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3743 4 -      4301 C---T-T-T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6972 3 +     16473 T---C-T--
i Saiga_tatarica.SaiTat_scaffold_39512                   I 163 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108146 4 + 121099817 C---T-T-T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29713 4 -     47369 C---T-T-T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30099 4 -     79414 C---T-T-T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26790 4 -     34454 C---T-T-T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14193 4 -     22428 C---T-T-T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29345 4 -     47109 C---T-T-T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237403 4 +   5703754 C---T-T-T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6993 4 +     21866 C---T-T-T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         24369 4 +     27374 A---T-T-T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27883 4 +     58920 A---T-T-T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14379 4 -     45317 A---T-T-T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22038 4 -     42441 A---T-T-T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24716 4 -     29113 A---T-T-T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27790 4 -     48123 A---T-T-T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48345 5 +     77746 C---T-TCT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857406 6 -   1910179 CTTTT-T--
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867502 4 +   3870691 C---T-T-T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5772 4 -     97271 TT--T-T--
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124012 3 +    196729 T---T-T--
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390297 4 +   1523678 C---T-T-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13256 3 +     22964 T---T-T--
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1807 5 +      5583 G---TCT-T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190706 3 +    199430 T---T-T--
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104658 3 -    539355 T---T-T--
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5989 4 +      6850 C---T-T-T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6040 4 +     20590 C---T-T-T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352253 4 - 186847797 T---T-T-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18911 5 -     31044 C---TTC-T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479300 3 -    610378 T---T-T--
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_1189070                        19915 4 +     26378 A---T-T-T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32593 4 -     78344 A---T-T-T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19240 4 +     25722 A---T-T-T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27545 4 -     62838 A---T-T-T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27591 4 +     46913 A---T-T-T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8400 4 -     28527 A---T-T-T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29482 4 -     64340 A---T-T-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27519 4 -     63452 A---T-T-T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8964 4 +     22490 A---T-T-T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2390 4 -      6147 A---T-T-T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9295 4 -     13050 A---T-T-T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254535 4 -   6242583 A---T-T-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         559 4 +     19340 A---T-T-T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172587 3 -    200418 T---T-T--
i Tragulus_javanicus.TraJav_scaffold_3462                I 164 C 0
s Trichechus_manatus.JH594705.1                            6479552 5 -  10818551 C---TCT-T
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832936 4 -   4065304 C---T-T-T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7204 4 -     70247 C---T-T-T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360360 3 -  33153633 C---T-T--
i Tursiops_truncatus.MRVK01000835.1                      I 2 C 0
s Ursus_maritimus.KK499267.1                                180951 3 +   5085361 t---t-t--
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24341 4 -     30710 T---T-T-T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23248 4 -    147434 T---T-T-T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75435 3 +   5488506 t---t-t--
i Vicugna_pacos.KN270157.1                               I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104093 2 -    112863 ----T-T--
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173281 4 -    224448 C---T-T-T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27989 3 -     86975 T---T-T--
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       284 4 -       753 C---T-T-T
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
e Sorex_araneus.JH798187.1                                 4669981 82 +  18376816 I
e Crocidura_indochinensis.CroInd_scaffold_77846               6137 25 +     12657 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Echinops_telfairi.JH980293.1                            62853801 0 - 111700974 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    2838 0 -     21056 C
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    115087 0 +    313613 C
e Manis_pentadactyla.KN006162.1                             219903 0 +    317179 C
e Manis_javanica.JSZB01003497.1                             672619 0 -    737560 C
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Condylura_cristata.JH655891.1                           35806293 0 +  53390261 C
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4590  7 +     36723 T--GA-A----AAC
s Acinonyx_jubatus.LLWD01001279.1                           811919  7 +   1699592 T--AC-A----AGC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24239  7 +     63021 T--AG-C----AAC
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414448  7 +  29979442 t--aa-a----aac
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214759  9 +    347723 ttaaa-a----aac
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17180  7 -     61208 T--AA-C----AAT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46906  7 +     53615 T--GA-A----AAC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42867  7 +     44087 T--GA-A----AAC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15492  7 -     21945 T--GA-A----AAC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17175  7 +     32033 T--GA-A----AAC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71346  7 -     84148 T--GA-A----AAC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43585  7 -     78289 T--GA-A----AAC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43024  7 +     55831 T--GA-A----AAC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41474  7 -     64179 T--GA-A----AAC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23113  7 -     24835 T--GA-A----AAC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40099  7 +     45454 T--GA-A----AAC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45745  7 +     70886 T--GA-A----AAC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7921  7 +     30854 T--GA-A----AAC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32057  7 +     42133 T--GA-A----AAC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584444  7 +   2318259 T--AA-A----AAT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176261  4 -    412891 T--AA-A-------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49542  7 -     68529 T--AA-A----AAT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     300  7 +     17741 T--AA-A----AAC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              925  7 -     15923 T--GA-A----AAC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1200  7 -     16391 T--GA-A----AAC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                760  7 -     17186 T--GA-A----AAC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15144  7 -     32367 G--AA-A----ATC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18682  7 -     45910 T--GA-A----AAC
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4540  4 -     15198 T--AG-A-------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273809  7 +  21539123 T--GA-A----AAC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9976  7 +     48076 T--GA-A----AAC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5113  7 -     28759 T--GA-A----AAC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32666  7 +     44353 T--GA-A----AAC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48036  7 -     71267 T--GA-A----AAC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22095  7 -     33135 T--GA-A----AAC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5284  7 +     11645 T--GA-A----AAC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5290  7 -     19611 T--GA-A----AAC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956117  7 -  23207421 t--aa-a----aac
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3326  7 -      4711 t--aa-a----aac
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85435  7 +    124022 T--AA-A----AAT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20967  7 +    288883 T--AA-A----AAT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355353  7 +  48749331 T--AA-A----AAT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753921  7 +   1948126 T--AA-A----AAT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544060  7 -  45695690 T--AA-A----AAT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529085  7 -   4408762 T--AA-A----AAT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6982  7 +     28062 T--GA-A----AAC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42276  7 -     91139 T--GA-A----AAC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19802  7 +     95584 T--GA-A----AAC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19715  7 +    119600 T--GA-A----AAC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9282  7 +     18648 T--GA-A----AAC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8821  7 -     13885 T--GA-A----AAC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             887  7 -      8861 T--GA-A----AAC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453280  7 + 189096842 T--GA-A----AAC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                802  7 +      8664 T--GA-A----AAC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630104  7 +  17673402 t--aa-a----aac
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664390  7 +   7040546 t--aa-a----aac
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208050  7 +   1652518 t--aa-a----aac
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504465  7 +  60362399 T--AA-A----AAA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8101  7 -     23171 T--AA-A----AAA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221444  7 +   9314153 t--aa-a----aaa
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614579  7 +  59632846 t--aa-a----aaa
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106160  7 -  63665305 t--aa-a----aaa
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408156  7 -  46296322 T--AA-A----AAT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590429  7 +  44709034 T--AA-A----AAT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    622  7 -      1880 T--GA-A----AAC
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269369  7 +    496798 T--GA-A----AGC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                475  4 -      1021 T--AG-A-------
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 I 9
s Castor_canadensis.CasCan_scaffold_39952                    26785  7 -     39886 T--TA-A----AAC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78405  7 -    217609 T--AA-A----AAT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995511  7 +  23392119 t--ta-a----aac
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998953  7 +  23407841 t--ta-a----aac
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62034  7 -     66877 T--TA-A----AAC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4200  7 -     12580 T--GA-A----AAC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42258  7 +     53515 T--GA-A----AAC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370189  7 -  26074798 T--GA-A----AAC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7078  7 -     34880 T--GA-A----AAC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66173  7 -     89041 T--GA-A----AAC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1298  7 -      5494 T--GA-A----AGC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491255  7 -  27778364 T--AA-A----AGC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18088  7 +     27315 T--AA-A----AGC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140089  7 -   4669795 T--GA-A----AAC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43831  7 +     47900 T--GA-A----AAC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43658  7 -     44860 T--GA-A----AAC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43644  7 -    148725 T--GA-A----AAC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25861  7 -     40656 T--GA-A----AAC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5827  7 +     20796 T--GA-A----AAC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10904  7 -     17524 T--GA-A----AAC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26626  7 -     34525 T--GA-A----AAC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10447  7 -     25376 T--GG-A----AAC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363047  7 -  39242232 T--GA-A----AAC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268759  7 +  21565898 T--GG-A----AAC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31093  7 -     45857 T--GA-A----AAC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26032  7 -     32606 T--GA-A----AAC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2191  7 +      8499 T--GA-A----AAC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24589  7 +     70610 T--GA-A----AAC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21518  7 +     36323 T--GA-A----AAC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11884  7 -     19938 T--TA-A----AAC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29702  7 -     33796 T--GA-A----AAC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4219  7 -     15404 T--GA-A----AAC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8080  7 -     32913 T--GA-A----AAC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18493  7 -     40346 T--GA-A----AAC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18748  7 +    216457 T--GA-A----AAC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18541  7 +     39636 T--GA-A----AAC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237947  7 -   2543920 t--aa-a----aac
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3130  7 +      5346 T--GA-A----AAC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41613  7 -    112038 T--GA-A----AAC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7184  7 +     34062 T--GA-A----AAC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342409  7 +  18827391 T--GA-A----AAC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8956  7 -     44032 T--GA-A----AAC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303733  7 - 135778131 T--GA-A----AAC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13853  7 +     15858 T--TA-A----AAC
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605429  7 -    839153 T--TA-A----AAC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408171  7 -   2368649 T--GA-A----AAC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378046  7 - 200372422 T--GA-A----AAC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1595  7 -     84244 T--GA-A----AAC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1877  7 -      8242 T--CA-A----AAA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43409  7 -     83289 A--AA-C----AAC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113816  7 - 224834208 T--AA-C----AAC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3371  7 +     87169 T--AA-A----AAC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644084  7 -   1526836 T--AA-A----ATC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16930  7 +     50838 G--GA-A----CAC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3395  7 +     36344 T--AA-A----AAC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27194  7 +     75252 T--AA-A----AAC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109228  7 -   2246927 T--TA-A----GAC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291631  7 +  12879189 T--GA-A----AAC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624446  7 -  35494412 t--aa-a----aac
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864283  4 -  20541912 T--AG-A-------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663546  7 -   1390856 T--AA-A----AGC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138332  7 -    198055 T--AA-A----AGC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97937  7 -    115145 T--AA-A----AAC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949559  7 -  37912305 T--TA-G----AAC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4494  7 -     10735 T--TA-G----AAC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9455  7 +     14636 T--AA-A----AAC
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853801  6 - 111700974 ---TG-A----AAC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5342  7 +     19438 t--ca-a----aaa
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238817  7 -    607251 t--aa-a----act
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107623  7 -  10337057 T--TA-A----AAC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30100  7 +    110024 T--AA-C----AGC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12086  7 +     18970 T--AA-C----AAC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915183  7 +  41312741 t--ta-a----aac
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577914  5 +  14770903 T--AA-A----A--
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040143  7 -   4378816 t--aa-a----aac
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374067  7 +  39960074 t--aa-a----aac
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              410853  7 -    498745 t--aa-a----aac
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3664900  7 +   7059049 A--AA-A----AGC
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               261936  7 +  21539334 T--GA-A----AAC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           63996  7 -    133382 A--AA-A----AAC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4213  7 +      7672 A--AA-A----AAC
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13828  7 -     24895 T--GA-A----AAC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41537  7 -     70999 T--GA-A----AAC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85499  7 +    112731 T--GA-A----AAC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42068  7 +     68309 T--GA-A----AAC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52394  7 -     65740 T--GA-A----AAC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23023  7 -     75513 T--GA-A----AAC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47220  7 -     97555 T--GA-A----AAC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3945  7 +     30972 T--GA-A----AAC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41665  7 -     52037 T--GA-A----AAC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58067  7 -    111500 T--GA-A----AAC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245828  7 - 206538554 T--AC-A----AGC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115614  7 - 205367284 T--AT-A----AGC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26715  7 -     30238 T--AT-A----AGC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123896  7 -    137831 t--ga-a----aac
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7441  7 +     22493 t--ga-a----aac
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19498  7 -     32986 t--ga-a----aac
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 228  7 -     28519 T--AA-A----AAC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90506  7 -     95226 G--AA-A----ACT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33353  7 -     36801 T--AA-A----AAC
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4892  7 -      8343 T--GA-A----AAC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253904  7 - 186649187 T--GA-A----AAC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     849  7 -     78134 T--AA-A----AAC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13753  7 -     40692 T--GA-A----AAC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35155  7 +     49394 T--GA-A----AAC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60023  7 -     66874 T--GA-A----AAC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8897  7 -     42923 T--GA-A----AAC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15897  7 -     53142 T--GA-A----AAC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29858  8 -    327341 A--AAAA----AAC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8263  7 +     48891 T--AA-A----AAT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6021  7 +      6687 T--TA-A----AAC
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6706  7 -     36432 A--AA-A----AAT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49868  7 +     49977 T--TA-A----AAA
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141912  7 -    630532 T--GA-A----AAC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68775  8 +     83186 C-AAA-A----AAC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70916  7 +    143317 T--AA-A----AAC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4947  7 +     12352 T--GA-A----AAC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12131  7 +     55766 T--GA-A----AAC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051729  7 + 191637585 T--GA-A----AAC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800607  7 +  11177569 T--GA-A----AAC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3554  7 -    135385 T--AA-A----AAC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385926  7 +   7955117 C--AA-A----AAC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1407  7 +     11955 T--GA-A----AAC
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2233  7 -     16823 T--AA-T----AAC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238739  7 +   9596543 T--AG-C----AAC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64712  7 -     97402 T--AA-A----AAC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42352  7 +    110728 T--GA-A----AAC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61774  5 -     65777 T--AA-A----A--
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758546  7 +  30322482 T--GA-A----AAC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3266  7 -     13097 T--GA-A----AAC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3020  7 +      5940 T--GA-A----AAC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2850  7 -      5717 T--GA-A----AAC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9226  7 -     11567 T--GA-A----AAC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10607  7 -     12945 T--GA-A----AAC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8075  7 +     29618 T--GA-A----AAC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8071  7 +     31569 T--GA-A----AAC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8081  7 +     24756 T--GA-A----AAC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8081  7 +     16388 T--GA-A----AAC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812598  7 -   3914936 t--aa-a----aac
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16926  3 +     24238 -----------AAT
i Lepus_americanus.LepAme_scaffold_56121                 I 3 C 0
s Lipotes_vexillifer.KE559953.1                             333753  7 +    662738 t--aa-a----aac
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               332974  7 -   1826925 T--GA-A----AAC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9659  7 +     19643 T--GA-A----AAC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043316  7 -   6120653 T--GA-A----AAC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080097  7 +  43346337 T--TA-A----AAC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613734  7 +  59628241 t--aa-a----aaa
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44358  7 -     61512 T--GA-A----AAC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372020  7 -  60120075 T--GA-A----AAC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24283  7 +     30207 T--GA-A----AAC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21386  7 -     24934 T--GA-A----AAC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24236  7 +     30527 T--GA-A----AAC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35412  7 -     50087 T--GA-A----AAC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45156  7 +     51645 T--GA-A----AAC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414359  7 - 187317192 T--GA-A----AAC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398589  7 +  25927173 T--GA-A----AAC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47761  7 -     62418 T--GA-A----AAC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  299  7 +     14901 T--GA-A----AAC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44233  7 +     59329 T--GA-A----AAC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270141  7 +    668171 T--GA-A----AAC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  417  7 +      1732 T--GA-A----AAC
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1939  7 +     17132 T--GA-A----AAC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222306  7 -    270270 T--CA-A----AAA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321438  7 +  24302211 T--GA-A----AAC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356270  7 -    752769 T--GA-A----AAC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672619  7 -    737560 T--AA-A----AAC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219903  7 +    317179 T--AA-A----AAC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500146  7 +  40650429 C--AA-A----AAC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149465  7 +    207569 T--TA-A----AAA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25287  7 -     74585 T--AA-A----AAC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49236  7 -    140813 T--AA-C----AAC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428332  7 +  29670104 T--AA-C----AAC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80297  7 +     93471 T--AA-A----AAC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9391  7 +     17804 T--GA-A----AAC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9893  7 -     12984 T--GA-A----AAC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18207  7 -     26561 T--GA-A----AAC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983684  7 +  93316391 T--GA-A----AAC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44855  7 +    145209 T--TG-A----AAC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184229  4 +    200668 T--AA-A-------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961548  7 +  27267610 T--AA-C----AGC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362332  5 -   8254450 t--aa-a----a--
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41233  5 -     48117 T--AA-A----A--
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21446  7 -     27822 T--GA-A----AAC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7605  7 +     27589 T--AA-A----AAC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51473  7 -     62432 T--GA-A----AAC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352189  7 +    437263 T--AA-A----AAC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178392  4 +    366855 T--AA-A-------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24628  7 -     82753 T--AA-C----AAT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17611  7 -     63510 A--AA-A----AAC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38272  5 +     47283 T--AA-A----A--
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592277  7 + 120012414 A--AA-C----AAC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686662  7 + 129401213 A--AA-C----AAC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216519  7 +  89631738 T--AA-C----AAC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495958  7 + 130317789 A--AA-C----AAC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81956  7 -     86153 T--AA-G----AAC
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354217  7 +  14710649 t--aa-a----aac
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792522  5 +  10118263 t--aa-a----a--
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386682  5 +   6019432 G--AA-A----A--
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382501  5 +   4330536 T--Aa-a----a--
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1329  5 +     18357 G--AA-A----A--
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118696  7 +    130748 T--TA-A----AAC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945309  7 +   3037898 T--AG-C----AGC
i Nannospalax_galili.KL204047.1                          I 81 C 0
s Nasalis_larvatus.k141_1350636                              28097  7 +     34575 T--GA-A----AAC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468200  7 -  31847680 t--aa-a----aac
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226358  7 -   7148211 t--aa-a----aac
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127099 11 -    149072 a--aa-aaactaac
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 222
s Nomascus_annamensis.k141_1771965                           52839  7 -    132029 T--GA-A----AAC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8934  7 -     16345 T--GA-A----AAC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14819  7 +     22201 T--GA-A----AAC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413040  7 -  22158432 T--GA-A----AAC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25217  7 -     54323 T--GA-A----AAC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197327  7 +   9404916 t--aa-a----aaa
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635687  7 + 196305487 T--GA-A----AAC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2445  7 -      3937 T--GA-A----AAC
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563952  7 - 199412804 T--GA-A----AAC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550293  3 -   3988456 -----------AAT
i Ochotona_princeps.JH802162.1                           I 3 C 0
s Octodon_degus.JH651603.1                                11053750  7 -  11899542 T--GA-A----AAC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450797  7 +   2017862 t--aa-a----aac
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435393  7 -    630418 T--AA-A----ACT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13390  7 +    150152 T--AA-A----ACT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91884  7 -    140218 T--AA-C----AAG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2778  7 -     41509 T--AA-C----AAC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095628  7 +  10937097 t--aa-a----aac
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12736  7 -     14239 C--AG-A----AGC
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102762  3 - 174332312 -----------aat
i Oryctolagus_cuniculus.CM000791.1                       I 3 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38373  7 +    559221 t--aa-a----aaa
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_649260                        39056  7 -     51505 t--ga-a----aac
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352059  7 +   1103335 T--GA-A----AAC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403383  7 -  44047080 T--AA-A----AAT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3902  7 +     17875 T--AA-A----AAT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471933  7 - 189151597 T--GA-A----AAC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23540  7 -    230217 T--AC-A----AGC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460866  7 -  18783137 T--AC-A----AGC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971586  7 +   8748460 T--AC-A----AGC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614821  7 +   2937107 T--AA-A----AAT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242271  7 - 183742232 T--GA-A----AAC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8733  7 +     21308 T--GA-A----AAC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291307  7 -  20919399 T--GA-A----AAC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21381  7 -     27687 T--GA-A----AAC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14527  7 +     16796 T--GA-A----AAC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21338  7 -     23640 T--GA-A----AAC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14194  7 +     78924 T--AA-A----AAC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25469  7 +     31479 T--GA-A----AAC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17838  7 -     24908 T--GA-A----AAC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         891  7 +      9367 T--TA-G----AAG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245974  7 +  18517816 T--AA-C----AAT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11483  7 -     15039 T--AA-A----AAC
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1545  7 +     55023 T--GA-A----AAC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1095  7 -     89929 T--GA-A----AAC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1684  7 +     40849 T--GA-A----AAC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253348  7 +  14605196 T--GA-A----AAC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2855  5 +     22231 T--AA-A----A--
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             63989  7 +    207309 T--GA-A----AAC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5082  7 -     25401 T--GA-A----AAC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30825  7 +     58159 T--GA-A----AAC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31101  7 +     63561 T--GA-A----AAC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30861  7 +     51148 T--GA-A----AAC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555831  7 -   4542175 T--GA-A----AAC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30845  7 +     51125 T--GA-A----AAC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3570  7 -      8168 T--AA-A----AAC
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7248  7 +     39866 T--GA-A----AAC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2332  7 -      9282 T--GA-A----AAC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41736  7 -     87950 T--GA-A----AAC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42130  7 -     88961 T--GA-A----AAC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6828  7 -     39403 T--GA-A----AAC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41779  7 +     87928 T--GA-A----AAC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6825  7 -     60166 T--GA-A----AAC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13762  7 -     67232 T--GA-A----AAC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41678  7 -     90634 T--GA-A----AAC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43145  7 +     89403 T--GA-A----AAC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177057  7 - 189387572 T--GA-A----AAC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191874  7 -   9816681 T--GA-A----AAC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26680  7 +     69807 T--GA-A----AAC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43876  7 -     80239 T--GA-A----AAC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2407  7 +      3019 T--TA-A----AAC
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981701  7 +   4620579 T--GA-A----AAC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565168  7 -   2598838 T--GA-A----AAC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2804  7 -      7103 T--GA-A----AAC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3401  7 -     11706 T--GA-A----AAC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7137  7 -     30655 T--GA-A----AAC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33462  7 +     46564 T--GA-A----AAC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93733  7 -     98465 T--GA-A----AAC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7370  7 +     35169 T--GA-A----AAC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36577  7 +     52041 T--AA-C----AAC
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51275  4 -     66298 T--AA-A-------
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3786  7 -     18639 T--AA-A----AAC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839992  7 -  28871421 t--ca-a----aaa
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536501  7 -   4952924 t--ca-a----aaa
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098180  7 +  38429054 T--AC-A----AGC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26054  7 +     91421 T--GA-A----AAC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152546  7 -   7812017 T--GA-A----AAC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6921  7 +     72585 T--GA-A----AAC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52312  7 +     55069 T--AA-A----ACT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021875  7 -  90668790 T--AA-C----GAC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913886  7 +   3329780 T--TA-A----CTA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              626  7 +      7119 T--GA-A----AAC
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121234  7 + 195417433 T--GA-A----AAC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235476  7 -   7961872 T--GA-A----AAC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73900  7 -    116970 T--CA-A----AAA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3128  7 +     27962 T--GA-A----AAA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3023  7 +      6077 T--GA-A----AAC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3114  7 +      5971 T--GA-A----AAC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3036  7 +      5932 T--GA-A----AAC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1378  7 -      4390 T--GA-A----AAC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390813  7 - 209938924 T--GA-A----AAC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2985  7 +      5979 T--GA-A----AAC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3747  7 -      4301 T--GA-A----AAC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6975  7 +     16473 T--AA-A----AAT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108150  7 + 121099817 T--GA-A----AAC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29717  7 -     47369 T--GA-A----AAC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30103  7 -     79414 T--GA-A----AAC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26794  7 -     34454 T--GA-A----AAC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14197  7 -     22428 T--GA-A----AAC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29349  7 -     47109 T--GA-A----AAC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237407  7 +   5703754 T--GA-A----AAC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           6997  7 +     21866 T--GA-A----AAC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         24373  7 +     27374 T--GA-A----AAC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27887  7 +     58920 T--GA-A----AAC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14383  7 -     45317 T--GA-A----AAC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22042  7 -     42441 T--GA-A----AAC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24720  7 -     29113 T--GA-A----AAC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27794  7 -     48123 T--GA-A----AAC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48350  7 +     77746 T--AA-C----AAC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857412  7 -   1910179 T--AA-A----AGC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867506  7 +   3870691 C--AA-A----AAC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5776  7 -     97271 T--AA-A----AAC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124015  7 +    196729 A--AA-A----AAC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390301  7 +   1523678 T--GA-A----AAC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13259  5 +     22964 T--AA-A----A--
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1812  7 +      5583 T--TA-A----AAC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190709  7 +    199430 T--AA-A----AAC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104661  7 -    539355 T--AA-A----AAC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                5993  7 +      6850 T--GA-A----AGC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6044  7 +     20590 T--GA-A----AGC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352257  7 - 186847797 T--GA-A----AAC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18916  7 -     31044 T--TA-A----AAC
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479303  4 -    610378 T--AA-A-------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19919  7 +     26378 T--GA-A----AAC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32597  7 -     78344 T--GA-A----AAC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19244  7 +     25722 T--GA-A----AAC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27549  7 -     62838 T--GA-A----AAC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27595  7 +     46913 T--GA-A----AAC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8404  7 -     28527 T--GA-A----AAC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29486  7 -     64340 T--GA-A----AAC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27523  7 -     63452 T--GA-A----AAC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8968  7 +     22490 T--GA-A----AAC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2394  7 -      6147 T--GA-A----AAC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9299  7 -     13050 T--GA-A----AAC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254539  7 -   6242583 T--GA-A----AAC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         563  7 +     19340 T--GA-A----AAC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172590  7 -    200418 T--AA-A----AAC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479557  7 -  10818551 T--TA-A----AAC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832940  7 -   4065304 C--AA-A----AAC
i Tupaia_chinensis.KB320699.1                            C 0 I 2
s Tupaia_tana.TupTan_flattened_line_394                       7208  7 -     70247 C--AA-A----AAC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360363  7 -  33153633 T--AA-A----AAC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Ursus_maritimus.KK499267.1                                180954  7 +   5085361 t--aa-a----aac
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24345  7 -     30710 T--GA-A----AAC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23252  7 -    147434 T--GA-A----AAC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75438  7 +   5488506 t--aa-a----aac
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104095  8 -    112863 T-AAA-A----AAA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173285  7 -    224448 G--AA-A----AAC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27992  7 -     86975 T--AA-A----AAC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       288  7 -       753 T--AA-A----AGC
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595               0  7 +      1812 T--AA-A----AAC
i Ziphius_cavirostris.ZipCav_flattened_line_572595       N 0 C 0
e Sorex_araneus.JH798187.1                                 4669981 82 +  18376816 I
e Crocidura_indochinensis.CroInd_scaffold_77846               6137 25 +     12657 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    2838  0 -     21056 C
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    115087  0 +    313613 C
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Condylura_cristata.JH655891.1                           35806293  0 +  53390261 C
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4597  7 +     36723 TG-GA-----A-T-C
s Acinonyx_jubatus.LLWD01001279.1                           811926  7 +   1699592 TG-AA-----A-T-T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24246  7 +     63021 CA-GT-----G-T-T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414455  7 +  29979442 tg-ga-----a-t-t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214768  7 +    347723 tg-ga-----a-t-t
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17187  7 -     61208 TT-GA-----A-T-T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46913  7 +     53615 TG-GA-----A-T-C
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42874  7 +     44087 TG-GA-----A-T-C
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15499  7 -     21945 TG-GA-----A-T-C
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17182  7 +     32033 TG-GA-----A-T-C
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71353  7 -     84148 TG-GA-----A-T-C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43592  7 -     78289 TG-GA-----A-T-C
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43031  7 +     55831 TG-GA-----A-T-A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41481  7 -     64179 TG-GA-----A-T-C
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23120  7 -     24835 TG-GA-----A-T-C
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40106  7 +     45454 TG-GA-----A-T-C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45752  7 +     70886 TG-GA-----A-T-C
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7928  7 +     30854 TG-GA-----A-T-C
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32064  7 +     42133 TG-GA-----A-T-C
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584451  7 +   2318259 TG-CA----AT-C--
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49549  6 -     68529 TT-CA-----A-T--
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     307  7 +     17741 TG-GA-----A-T-C
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              932  7 -     15923 TG-GA-----A-T-C
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1207  7 -     16391 TG-GA-----A-T-C
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                767  7 -     17186 TG-GA-----A-T-C
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15151  7 -     32367 TG-GG-----A-T-T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18689  7 -     45910 TA-GA-----G-T-C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273816  7 +  21539123 TG-GA-----A-T-C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9983  7 +     48076 TG-GA-----A-T-C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5120  7 -     28759 TG-GA-----A-T-C
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32673  7 +     44353 TG-GA-----A-T-C
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48043  7 -     71267 TG-GA-----A-T-C
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22102  7 -     33135 TG-GA-----A-T-C
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5291  8 +     11645 TA-GA-----ATT-C
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5297  8 -     19611 TG-GA-----ATT-C
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956124  7 -  23207421 tg-ca-----a-t-c
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3333  7 -      4711 tg-ca-----a-t-c
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85442  7 +    124022 TG-CA----AT-C--
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20974  7 +    288883 TG-CA----AT-C--
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355360  7 +  48749331 TG-CA----AT-C--
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753928  7 +   1948126 TG-CA----AT-C--
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544067  7 -  45695690 TG-CA----AT-C--
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529092  7 -   4408762 TG-CA----AT-C--
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6989  7 +     28062 TA-GA-----A-T-C
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42283  7 -     91139 TA-GA-----A-T-C
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19809  7 +     95584 TA-GA-----A-T-C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19722  7 +    119600 TA-GA-----A-T-C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9289  7 +     18648 TG-GA-----A-T-C
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8828  7 -     13885 TG-GA-----A-T-C
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             894  7 -      8861 TG-GA-----A-T-C
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453287  7 + 189096842 TG-GA-----A-T-C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                809  7 +      8664 TG-GA-----A-T-C
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630111  7 +  17673402 tg-ct-----a-t-c
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664397  7 +   7040546 tg-ct-----a-t-c
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208057  7 +   1652518 tg-ct-----a-t-c
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504472  7 +  60362399 TG-GA-----A-T-T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8108  7 -     23171 TG-GA-----A-T-T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221451  7 +   9314153 tg-ga-----a-t-t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614586  7 +  59632846 tg-ga-----a-t-t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106167  7 -  63665305 tg-ga-----a-t-t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408163  7 -  46296322 TG-CA----AT-C--
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590436  7 +  44709034 TG-CA----AT-C--
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    629  7 -      1880 TG-GA-----C-T-C
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269376  7 +    496798 TG-GA-----A-T-C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26792  7 -     39886 TG-GA-----T-T-C
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78412  5 -    217609 GG-CA-----A----
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           4207  7 -     12580 TG-GA-----A-T-C
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42265  7 +     53515 TG-GA-----A-T-C
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370196  7 -  26074798 TG-GA-----A-T-C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7085  7 -     34880 TG-GA-----A-T-C
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66180  7 -     89041 TG-GA-----A-T-C
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1305  7 -      5494 TG-GA-----A-T-C
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491262  8 -  27778364 TT-GA-----A-TCA
i Ceratotherium_simum.JH767749.1                         C 0 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18095  8 +     27315 TT-GA-----A-TCA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 2
s Cercocebus_atys.KQ010504.1                                140096  7 -   4669795 TG-GA-----A-T-C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43838  7 +     47900 TG-GA-----A-T-C
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43665  7 -     44860 TG-GA-----A-T-C
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43651  7 -    148725 TG-GA-----A-T-C
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25868  7 -     40656 TG-GA-----A-T-C
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5834  7 +     20796 TG-GA-----A-T-C
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10911  7 -     17524 TG-GA-----A-T-C
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26633  7 -     34525 TG-GA-----A-T-C
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10454  7 -     25376 TG-GA-----A-T-C
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363054  7 -  39242232 TG-GA-----A-T-C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268766  7 +  21565898 TG-GA-----A-T-C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31100  7 -     45857 TG-GA-----A-T-C
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26039  7 -     32606 TG-GA-----A-T-C
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2198  7 +      8499 TG-GA-----A-T-C
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24596  7 +     70610 TG-GA-----A-T-C
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21525  7 +     36323 TG-GA-----A-T-C
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11891  7 -     19938 TG-GA-----A-T-C
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29709  7 -     33796 TG-GA-----A-T-C
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4226  7 -     15404 TG-GA-----A-T-C
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8087  7 -     32913 TG-GA-----A-T-C
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18500  7 -     40346 TG-GA-----A-T-C
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18755  7 +    216457 TG-GA-----A-T-C
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18548  7 +     39636 TG-GA-----A-T-C
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237954  7 -   2543920 tg-ga-----a-t-c
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3137  7 +      5346 TG-TA-----A-T-C
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41620  7 -    112038 TA-GA-----A-T-C
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7191  7 +     34062 TA-GA-----A-T-C
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342416  7 +  18827391 TG-GA-----A-T-C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8963  7 -     44032 TG-GA-----A-T-C
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303740  7 - 135778131 TG-GA-----A-T-C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13860  7 +     15858 TA-GA-----A-T-C
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605436  7 -    839153 TA-GA-----A-T-C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408178  7 -   2368649 TG-GA-----A-T-C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378053  7 - 200372422 TG-GA-----A-T-C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1602  7 -     84244 TG-GA-----A-T-C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1884  4 -      8242 TT-GG----------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43416  7 -     83289 AA-GT-----A-T-T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113823  7 - 224834208 TA-GC-----A-T-t
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6162  5 +     12657 ---aa-----a-t-g
i Crocidura_indochinensis.CroInd_scaffold_77846          I 25 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3378  7 +     87169 TG-GA-----C-T-T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644091  7 -   1526836 TG-GA-----G-T-C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16937  7 +     50838 TG-GA-----A-T-T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109235  7 -   2246927 TG-GA-----A-T-C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291638  7 +  12879189 TG-GA-----A-T-C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624453  7 -  35494412 tg-ca-----a-t-c
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663553  8 -   1390856 TT-GA-----A-TCA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138339  8 -    198055 TT-GA-----A-TCA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 2
s Dinomys_branickii.DinBra_scaffold_10381                    97944  7 -    115145 TG-GA-----A-T-C
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949566  7 -  37912305 GA-Ga-----c-t-t
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4501  7 -     10735 GA-GA-----C-T-T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62853807  7 - 111700974 TG-GA-----A-T-C
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5349  2 +     19438 ---tg----------
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238824  3 -    607251 tg-C-----------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107630  7 -  10337057 AG-GA-----A-T-G
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30107  7 +    110024 TA-GC-----A-C-T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12093  8 +     18970 TAAGC-----A-C-T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915190  7 +  41312741 tg-ga-----a-t-t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040150  8 -   4378816 tg-ga-----a-tca
i Equus_asinus.JREZ01000139.1                            C 0 I 273
s Equus_caballus.CM000403.2                               21374074  8 +  39960074 tg-ga-----a-tca
i Equus_caballus.CM000403.2                              C 0 I 273
s Equus_przewalskii.KK951119.1                              410860  8 -    498745 tg-ga-----a-tca
i Equus_przewalskii.KK951119.1                           C 0 I 273
s Erinaceus_europaeus.JH835339.1                           3664907  7 +   7059049 TG-GA-----T-T-C
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               261943  7 +  21539334 TG-GA-----A-T-C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64003  7 -    133382 TG-AA-----A-T-C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4220  7 +      7672 TG-CA-----A-T-C
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13835  7 -     24895 TG-GC-----A-T-C
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41544  7 -     70999 TG-GC-----A-T-C
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85506  7 +    112731 TG-GC-----A-T-C
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42075  7 +     68309 TG-GC-----A-T-C
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52401  7 -     65740 TG-GC-----A-T-C
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23030  7 -     75513 TG-GC-----A-T-C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47227  7 -     97555 TG-GC-----A-T-C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3952  7 +     30972 TG-GC-----A-T-C
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41672  7 -     52037 TG-GC-----A-T-C
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58074  7 -    111500 TG-GC-----A-T-C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245835  7 - 206538554 TG-AA-----A-T-T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115621  7 - 205367284 TG-AA-----A-T-T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26722  7 -     30238 TG-AA-----A-T-T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123903  7 -    137831 tg-ga-----g-t-c
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7448  7 +     22493 tg-ga-----g-t-c
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19505  7 -     32986 tg-ga-----g-t-c
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 235  7 -     28519 TG-CC-----A-T-C
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90513  6 -     95226 TG-CA-----T-C--
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33360  7 -     36801 TG-GA-----A-T-T
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4899  7 -      8343 TG-TA-----A-T-C
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253911  7 - 186649187 TG-GA-----A-T-C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     856  4 -     78134 TG-GA----------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Hapalemur_alaotrensis.k141_330369                          13760  7 -     40692 TG-GC-----A-T-C
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35162  7 +     49394 TG-GC-----A-T-C
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60030  7 -     66874 TG-GC-----A-T-C
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8904  7 -     42923 TG-GC-----A-T-C
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15904  7 -     53142 TG-GC-----A-T-C
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29866  7 -    327341 TG-GG-----C-T-T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8270  7 +     48891 TG-CA----AT-C--
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6028  7 +      6687 TG-GA-----A-T-C
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6713  7 -     36432 TG-CA-----A-T-C
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49875  4 +     49977 AT-TG----------
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141919  7 -    630532 TG-GA-----A-T-C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68783  7 +     83186 TG-GA-----A-T-T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               4954  7 +     12352 TG-GA-----A-T-C
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12138  7 +     55766 TG-GA-----A-T-C
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051736  7 + 191637585 TG-GA-----A-T-C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800614  7 +  11177569 TG-GA-----A-T-C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3561  7 -    135385 TG-GA-----T-T-C
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385933  7 +   7955117 TG-GG-----A-T-C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1414  7 +     11955 TG-GA-----A-T-T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2240  7 -     16823 TG-CA-----A-T-C
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238746  7 +   9596543 TT-GA-----A-T-T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64719  7 -     97402 TG-CA-----A-T-C
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42359  7 +    110728 TG-GA-----A-T-C
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14758553  7 +  30322482 TG-GC-----A-T-C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3273  7 -     13097 TG-TA-----A-T-C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3027  7 +      5940 TG-TA-----A-T-C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2857  7 -      5717 TG-TA-----A-T-C
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9233  7 -     11567 TG-GA-----A-T-C
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10614  7 -     12945 TG-GA-----A-T-C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8082  7 +     29618 TG-GA-----A-T-C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8078  7 +     31569 TG-GA-----A-T-C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8088  7 +     24756 TG-GA-----A-T-C
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8088  7 +     16388 TG-GA-----A-T-C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812605  7 -   3914936 tg-ga-----a-t-t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16929  7 +     24238 TA-AA-----A-T-C
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333760  7 +    662738 tg-ca-----a-t-c
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               332981  7 -   1826925 TG-GA-----A-T-C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9666  7 +     19643 TG-GA-----G-T-C
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043323  7 -   6120653 TG-GA-----G-T-C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080104  7 +  43346337 TG-GA-----G-T-C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613741  7 +  59628241 tg-ga-----a-t-t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44365  7 -     61512 TG-GA-----A-T-C
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372027  7 -  60120075 TG-GA-----A-T-C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24290  7 +     30207 TG-GA-----A-T-C
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21393  7 -     24934 TG-GA-----A-T-C
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24243  7 +     30527 TG-GA-----A-T-C
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35419  7 -     50087 TG-GA-----A-T-C
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45163  7 +     51645 TG-GA-----A-T-C
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414366  7 - 187317192 TA-GA-----A-T-C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398596  7 +  25927173 TG-GA-----A-T-C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47768  7 -     62418 TG-GA-----A-T-C
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  306  7 +     14901 TG-GA-----A-T-C
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44240  7 +     59329 TG-GA-----A-T-C
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270148  7 +    668171 TG-GA-----A-T-C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  424  7 +      1732 TG-GA-----A-T-C
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1946  7 +     17132 TG-GA-----A-T-C
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222313  2 -    270270 ---TG----------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321445  7 +  24302211 TG-GA-----A-T-C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356277  7 -    752769 TG-GA-----A-T-C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672626  7 -    737560 TG-GA-----A-C-C
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219910  7 +    317179 TG-GA-----G-C-C
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500153  7 +  40650429 TG-GG-----A-T-C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149472  4 +    207569 CT-GA----------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25294  7 -     74585 TG-GA-----A-T-T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49243  7 -    140813 TT-GC-----A-T-T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428339  7 +  29670104 TA-GT-----A-T-T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80304  7 +     93471 TG-AA-----A-T-C
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9398  7 +     17804 TG-GA-----A-T-C
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9900  7 -     12984 TG-GA-----A-T-C
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18214  7 -     26561 TG-GA-----A-T-C
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983691  7 +  93316391 TG-GA-----A-T-C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44862  7 +    145209 TG-GA-----A-T-T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961555  7 +  27267610 TA-GC-----A-T-T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21453  7 -     27822 TG-GA-----A-T-C
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7612  7 +     27589 TG-GA-----A-T-T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51480  7 -     62432 TG-GA-----A-T-C
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352196  7 +    437263 TG-CA-----C-T-C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24635  3 -     82753 TG-C-----------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17618  7 -     63510 TG-GG-----C-T-T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mus_caroli.LT608237.1                                   35592284  7 + 120012414 TA-GC-----A-A-t
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686669  7 + 129401213 TA-GC-----A-A-T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216526  7 +  89631738 TA-GC-----G-A-T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495965  7 + 130317789 TA-GC-----A-A-t
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81963  7 -     86153 TG-GA-----A-T-C
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354224  7 +  14710649 ta-ga-----a-g-t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118703  7 +    130748 TG-GA-----A-T-C
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945316  7 +   3037898 TG-AC-----A-T-t
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28104  7 +     34575 TG-GA-----A-T-C
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468207  7 -  31847680 tg-ga-----a-t-t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226365  7 -   7148211 tg-ca-----a-t-c
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127332 12 -    149072 tt-aaaaaaaa-a-a
i Noctilio_leporinus.NocLep_scaffold_7894                I 222 C 0
s Nomascus_annamensis.k141_1771965                           52846  7 -    132029 TG-GA-----A-T-C
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8941  7 -     16345 TG-GA-----A-T-C
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14826  7 +     22201 TG-GA-----A-T-C
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413047  7 -  22158432 TG-GA-----A-T-C
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25224  7 -     54323 TG-GA-----A-T-C
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197334  7 +   9404916 tg-ga-----a-t-t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635694  7 + 196305487 TG-GA-----G-T-C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2452  7 -      3937 TG-GA-----G-T-C
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563959  7 - 199412804 TG-GA-----G-T-C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550296  7 -   3988456 GA-GA-----A-C-T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053757  7 -  11899542 TG-GA-----A-T-C
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450804  7 +   2017862 tg-ga-----a-t-t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435400  3 -    630418 TG-C-----------
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13397  6 +    150152 TG-CA-----T-C--
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91891  7 -    140218 TA-GC-----A-C-T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2785  7 -     41509 CA-GC-----A-T-T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095635  7 +  10937097 tg-ca-----a-t-c
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12743  7 -     14239 TG-GA-----A-T-C
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102765  7 - 174332312 ta-aa-----a-t-c
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38381  7 +    559221 tg-ga-----a-t-t
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_649260                        39063  7 -     51505 tg-ga-----g-t-c
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352066  7 +   1103335 TG-GA-----G-T-C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403390  7 -  44047080 TG-CA----AT-C--
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3909  7 +     17875 TG-CA----AT-C--
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471940  7 - 189151597 TG-GA-----A-T-C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23547  7 -    230217 TG-AA-----A-T-T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460873  7 -  18783137 TG-AA-----A-T-T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971593  7 +   8748460 TG-AA-----A-T-T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614828  7 +   2937107 TG-CA----AT-C--
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242278  7 - 183742232 TG-GA-----A-T-C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8740  7 +     21308 TG-GA-----A-T-C
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291314  7 -  20919399 TG-GA-----A-T-C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21388  7 -     27687 TG-GA-----A-T-C
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14534  7 +     16796 TG-GA-----A-T-C
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21345  7 -     23640 TG-GA-----A-T-C
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14201  7 +     78924 TA-GA-----A-T-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25476  7 +     31479 TG-GA-----G-T-C
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17845  7 -     24908 TG-GA-----G-T-C
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         898  7 +      9367 CA-GA-----C-T-T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245981  7 +  18517816 CA-GC-----A-T-T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11490  7 -     15039 TG-CA-----A-T-C
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1552  7 +     55023 TG-GA-----A-T-C
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1102  7 -     89929 TA-GA-----A-T-C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1691  7 +     40849 TA-GA-----A-T-C
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253355  7 +  14605196 TA-GA-----A-T-C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             63996  7 +    207309 TG-GA-----A-T-C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5089  7 -     25401 TG-GA-----A-T-C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30832  7 +     58159 TG-GA-----A-T-C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31108  7 +     63561 TG-GA-----A-T-C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30868  7 +     51148 TG-GA-----A-T-C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555838  7 -   4542175 TG-GA-----A-T-C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30852  7 +     51125 TG-GA-----A-T-C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3577  7 -      8168 TG-CA-----A-T-C
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7255  7 +     39866 TG-GA-----A-T-C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2339  7 -      9282 TG-GA-----A-T-C
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41743  7 -     87950 TG-GA-----A-T-C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42137  7 -     88961 TG-GA-----A-T-C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6835  7 -     39403 TG-GA-----A-T-C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41786  7 +     87928 TG-GA-----A-T-C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6832  7 -     60166 TG-GA-----A-T-C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13769  7 -     67232 TG-GA-----A-T-C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41685  7 -     90634 TG-GA-----A-T-C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43152  7 +     89403 TG-GA-----A-T-C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177064  7 - 189387572 TG-GA-----A-T-C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191881  7 -   9816681 TG-GA-----A-T-C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26687  7 +     69807 TG-GA-----A-T-C
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43883  7 -     80239 TG-GA-----A-T-C
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2414  7 +      3019 TG-GA-----A-T-C
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981708  7 +   4620579 TG-GC-----A-T-C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565175  8 -   2598838 TG-GA-----ATT-C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2811  8 -      7103 TG-GA-----ATT-C
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3408  8 -     11706 TG-GA-----ATT-C
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7144  8 -     30655 TG-GA-----ATT-C
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33469  8 +     46564 TG-GA-----ATT-C
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93740  8 -     98465 TG-GA-----ATT-C
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7377  8 +     35169 TG-GA-----ATT-C
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36584  7 +     52041 TT-GC-----A-t-t
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3793  7 -     18639 TG-GA-----A-T-T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5839999  2 -  28871421 ---tg----------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536508  2 -   4952924 ---tg----------
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098187  7 +  38429054 TG-AA-----A-T-T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26061  7 +     91421 TG-GA-----A-T-C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152553  7 -   7812017 TG-GA-----A-T-C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6928  7 +     72585 TG-GA-----A-T-C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52319  3 +     55069 TG-C-----------
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021882  7 -  90668790 TA-AC-----G-A-T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913893  4 +   3329780 Tt-gg----------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              633  7 +      7119 TG-GA-----A-T-C
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121241  7 + 195417433 TG-GA-----A-T-C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235483  7 -   7961872 TG-GA-----A-T-C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73907  2 -    116970 ---AG----------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3135  7 +     27962 TG-TA-----A-T-C
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3030  7 +      6077 TG-CA-----A-T-C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3121  7 +      5971 TG-TA-----A-T-C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3043  7 +      5932 TG-TA-----A-T-C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1385  7 -      4390 TG-TA-----A-T-C
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390820  7 - 209938924 TG-TA-----A-T-C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2992  7 +      5979 TG-TA-----A-T-C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3754  7 -      4301 TG-CA-----A-T-C
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6982  7 +     16473 TG-CA----AT-C--
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108157  7 + 121099817 TG-GA-----A-T-C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29724  7 -     47369 TG-GA-----A-T-C
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30110  7 -     79414 TG-GA-----A-T-C
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26801  7 -     34454 TG-GA-----A-T-C
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14204  7 -     22428 TG-GA-----A-T-C
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29356  7 -     47109 TG-GA-----A-T-C
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237414  7 +   5703754 TG-GA-----A-T-C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7004  7 +     21866 TG-GA-----A-T-C
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         24380  7 +     27374 TG-GA-----A-T-C
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27894  7 +     58920 TG-GA-----A-T-C
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14390  7 -     45317 TG-GA-----A-T-C
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22049  7 -     42441 TG-GA-----A-T-C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24727  7 -     29113 TG-GA-----A-T-C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27801  7 -     48123 TG-GA-----A-T-C
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48357  7 +     77746 TA-GC-----A-T-T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857419  7 -   1910179 TG-GA-----A-T-C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670063  5 +  18376816 ---aa-----a-t-g
i Sorex_araneus.JH798187.1                               I 82 C 0
s Spermophilus_dauricus.KZ294078.1                         1867513  7 +   3870691 TG-GG-----A-T-C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5783  7 -     97271 TA-GA-----A-T-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124022  7 +    196729 TG-GG-----C-T-T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390308  7 +   1523678 TG-GA-----A-T-C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1819  7 +      5583 TG-GG-----A-T-C
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190716  8 +    199430 TG-GA-----G-TCA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104668  8 -    539355 TG-AA-----G-TCA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6000  7 +      6850 TG-GA-----A-T-C
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6051  7 +     20590 TG-GA-----A-T-C
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352264  7 - 186847797 TG-GA-----A-T-C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18923  7 -     31044 TG-GA-----A-T-C
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19926  7 +     26378 TG-GA-----A-T-C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32604  7 -     78344 TG-GA-----A-T-C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19251  7 +     25722 TG-GA-----A-T-C
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27556  7 -     62838 TG-GA-----A-T-C
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27602  7 +     46913 TG-GA-----A-T-C
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8411  7 -     28527 TG-GA-----A-T-C
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29493  7 -     64340 TG-GA-----A-T-C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27530  7 -     63452 TG-GA-----A-T-C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8975  7 +     22490 TG-GA-----A-T-C
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2401  7 -      6147 TG-GA-----A-T-C
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9306  7 -     13050 TG-GA-----A-T-C
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254546  7 -   6242583 TG-GA-----A-T-C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         570  7 +     19340 TG-GA-----A-T-C
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172597  6 -    200418 TG-CA-----A-T--
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479564  7 -  10818551 GG-GT-----A-T-C
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832949  1 -   4065304 --------------C
i Tupaia_chinensis.KB320699.1                            I 2 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7215  2 -     70247 TG-------------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 1
s Tursiops_truncatus.MRVK01000835.1                       17360370  7 -  33153633 TG-CA-----A-T-C
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Ursus_maritimus.KK499267.1                                180961  7 +   5085361 tg-ga-----a-t-t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24352  7 -     30710 TG-GC-----A-T-C
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23259  7 -    147434 TG-GC-----A-T-C
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75445  7 +   5488506 tg-ct-----a-t-c
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104103  7 -    112863 TG-GA-----A-T-T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173292  7 -    224448 TA-GA-----A-T-C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         27999  7 -     86975 TG-GA-----A-T-T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       295  7 -       753 TG-GT-----A-C-T
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595               7  7 +      1812 TG-AA-----A-T-C
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Dasyprocta_punctata.DasPun_flattened_line_15900            27201  0 +     75252 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70923  0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  9462  0 +     14636 C
e Cuniculus_paca.CunPac_flattened_line_7025                   3402  0 +     36344 C
e Cavia_tschudii.CavTsc_scaffold_23560                       62041  0 -     66877 C
e Cavia_porcellus.DS562891.1                               4998960  0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4995518  0 +  23392119 C
e Desmodus_rotundus.KZ672289.1                            11864287  0 -  20541912 C
e Carollia_perspicillata.CarPer_scaffold_668536                479  9 -      1021 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  4544  0 -     15198 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    2838  0 -     21056 C
e Tonatia_saurophila.TonSau_scaffold_294                    479307  0 -    610378 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                13264  0 +     22964 C
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    115087  0 +    313613 C
e Pteronotus_parnellii.KE847780.1                            51279  0 -     66298 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             2860  0 +     22231 C
e Myotis_myotis.MyoMyo_scaffold_66571                         1334  0 +     18357 C
e Myotis_lucifugus.GL429869.1                               382506  0 +   4330536 C
e Myotis_davidii.KB100139.1                                4386687  0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9792527  0 +  10118263 C
e Murina_feae.MurFea_scaffold_17764                          38277  0 +     47283 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 178396  0 +    366855 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             41238  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6362337  0 -   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                184233  0 +    200668 C
e Lasiurus_borealis.LasBor_scaffold_16567                    61779  0 -     65777 C
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Eptesicus_fuscus.JH977646.1                             12577919  0 +  14770903 C
e Condylura_cristata.JH655891.1                           35806293  0 +  53390261 C
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C
e Anoura_caudifer.AnoCau_scaffold_1412                      176265  0 -    412891 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4604 6 +     36723 ATAGAA
s Acinonyx_jubatus.LLWD01001279.1                           811933 6 +   1699592 AGAGAA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24253 6 +     63021 GTATAA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414462 6 +  29979442 ctAGAA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214775 6 +    347723 atagaa
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17194 6 -     61208 ATCCAA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46920 6 +     53615 ACAGAA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42881 6 +     44087 ACAGAA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15506 6 -     21945 ACAGAA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17189 6 +     32033 ACAGAA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71360 6 -     84148 ATAAAA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43599 6 -     78289 ATAAAA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43038 6 +     55831 ATAAAA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41488 6 -     64179 ATAAAA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23127 6 -     24835 ATAAAA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40113 6 +     45454 ATAAAA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45759 6 +     70886 ATAAAA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7935 6 +     30854 ATAAAA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32071 6 +     42133 ATAAAA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584458 6 +   2318259 AAAGAA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49555 6 -     68529 CAAGAA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     314 6 +     17741 ATAGAA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              939 6 -     15923 ATAGAA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1214 6 -     16391 ATAGAA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                774 6 -     17186 ATAGAA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15158 6 -     32367 GTTGAA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18696 6 -     45910 ATAGAA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273823 6 +  21539123 ATAGAA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9990 6 +     48076 ATAGAA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5127 6 -     28759 ATAGAA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32680 6 +     44353 ATAGAA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48050 6 -     71267 ATAGAA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22109 6 -     33135 ATAGAA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5299 6 +     11645 ATAGAA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5305 6 -     19611 ATAGAA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956131 6 -  23207421 AAAGAA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3340 6 -      4711 AAAGAA
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85449 6 +    124022 AAAGAA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20981 6 +    288883 AAAGAA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355367 6 +  48749331 AAAGAA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753935 6 +   1948126 AAAGAA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544074 6 -  45695690 AAAGAA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529099 6 -   4408762 AAAGAA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   6996 6 +     28062 ACAGAG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42290 6 -     91139 ACAGAG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19816 6 +     95584 ACAGAG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19729 6 +    119600 ACAGAG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9296 6 +     18648 ATAGAA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8835 6 -     13885 ATAGAA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             901 6 -      8861 ATAGAA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453294 6 + 189096842 ATAGAA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                816 6 +      8664 ATAGAA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630118 6 +  17673402 AAAGAA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664404 6 +   7040546 AAAGAA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208064 6 +   1652518 AAAGAA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504479 6 +  60362399 ATAGGA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8115 6 -     23171 ATAGGA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221458 6 +   9314153 ataggA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614593 6 +  59632846 ataggA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106174 6 -  63665305 ataggA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408170 6 -  46296322 AAAGAA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590443 6 +  44709034 AAAGAA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    636 6 -      1880 ATAGAA
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269383 6 +    496798 ATAGAA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26799 4 -     39886 AT--AA
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78417 4 -    217609 --AGAA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           4214 6 -     12580 ATAGAA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42272 6 +     53515 ATAGAA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370203 6 -  26074798 TTAGAA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7092 6 -     34880 TTAGAA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66187 6 -     89041 TTAGAA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1312 6 -      5494 ATAGAA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491272 3 -  27778364 ---GAA
i Ceratotherium_simum.JH767749.1                         I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18105 3 +     27315 ---GAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 2 C 0
s Cercocebus_atys.KQ010504.1                                140103 6 -   4669795 ACAGAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43845 6 +     47900 ACAGAA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43672 4 -     44860 A--GAA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43658 6 -    148725 ACAGAA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25875 6 -     40656 ACAGAA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5841 6 +     20796 ACAGAA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10918 6 -     17524 ACAGAA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26640 6 -     34525 ACAGAA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10461 6 -     25376 ACAGAA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363061 6 -  39242232 ACAGAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268773 6 +  21565898 ACAGAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31107 6 -     45857 ACAGAA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26046 6 -     32606 ACAGAA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2205 6 +      8499 ACAGAA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24603 6 +     70610 ACAGAA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21532 6 +     36323 ACAGAA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11898 6 -     19938 ATACAA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29716 6 -     33796 ATAGCA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4233 6 -     15404 ATAGCA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8094 6 -     32913 ATAGAA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18507 6 -     40346 ATAGAA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18762 6 +    216457 ATAGAA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18555 6 +     39636 ATAGAA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237961 6 -   2543920 aTAGAA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3144 6 +      5346 ATAGAA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41627 6 -    112038 ACAGAG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7198 6 +     34062 ACAGAG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342423 6 +  18827391 ACAGAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8970 6 -     44032 ACAGAA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303747 6 - 135778131 ACAGAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13867 6 +     15858 ATATGA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605443 6 -    839153 ATATGA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408185 6 -   2368649 ACAGAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378060 6 - 200372422 ATAGAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1609 6 -     84244 ATAGAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43423 6 -     83289 GTAGAA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113830 6 - 224834208 gtagaa
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6167 6 +     12657 acacaa
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3385 6 +     87169 AGAGAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644098 6 -   1526836 ATAGAA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16944 6 +     50838 ATAGAA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109242 6 -   2246927 AGACAA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291645 6 +  12879189 ATAGAA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624460 6 -  35494412 AAAGAA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663561 3 -   1390856 ---GAA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138349 3 -    198055 ---GAA
i Diceros_bicornis.DicBicMic_scaffold_5955               I 2 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97951 6 -    115145 ACAGAA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949573 6 -  37912305 atataa
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4508 6 -     10735 ATATAA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62853814 4 - 111700974 CA--AA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238827 6 -    607251 AAAGAA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107637 6 -  10337057 ATAAAA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30114 5 +    110024 GTAGA-
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12101 5 +     18970 GTAGA-
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915197 6 +  41312741 agagaa
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040431 6 -   4378816 ATAGAA
i Equus_asinus.JREZ01000139.1                            I 273 C 0
s Equus_caballus.CM000403.2                               21374355 6 +  39960074 ATAGAA
i Equus_caballus.CM000403.2                              I 273 C 0
s Equus_przewalskii.KK951119.1                              411141 6 -    498745 ATAGAA
i Equus_przewalskii.KK951119.1                           I 273 C 0
s Erinaceus_europaeus.JH835339.1                           3664914 6 +   7059049 ATGGAA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               261950 6 +  21539334 ACAGAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64010 6 -    133382 AAAGAA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4227 6 +      7672 AAAGAA
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13842 6 -     24895 ATAGAA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41551 6 -     70999 ATAGAA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85513 6 +    112731 ATAGAA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42082 6 +     68309 ATAGAA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52408 6 -     65740 ATAGAA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23037 6 -     75513 ATAGAA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47234 6 -     97555 ATAGAA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3959 6 +     30972 ATAGAA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41679 6 -     52037 ATAGAA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58081 6 -    111500 ATAGAA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245842 6 - 206538554 AGAGAA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115628 6 - 205367284 AGAGAA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26729 6 -     30238 AGAGAA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     123910 6 -    137831 atagaa
i Galago_moholi.ctg3793                                  C 0 I 200
s Galago_senegalensis.k141_991736                             7455 6 +     22493 atagaa
i Galago_senegalensis.k141_991736                        C 0 I 200
s Galagoides_demidoff.k141_561628                            19512 6 -     32986 atagaa
i Galagoides_demidoff.k141_561628                        C 0 I 200
s Galeopterus_variegatus.GalVar_scaffold_51812                 242 6 -     28519 ACAGAA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90519 6 -     95226 AAAGAA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33367 6 -     36801 ATAGAT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4906 6 -      8343 ATAGAT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253918 6 - 186649187 ATAGAA
i Gorilla_gorilla.LT578341.1                             C 0 I 17
s Graphiurus_murinus.GraMur_scaffold_10447                     862 4 -     78134 --AGAA
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Hapalemur_alaotrensis.k141_330369                          13767 6 -     40692 ATAGAA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35169 6 +     49394 ATAGAA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60037 6 -     66874 ATAGAA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8911 6 -     42923 ATAGAA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15911 6 -     53142 ATAGAA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29873 6 -    327341 AGAGAA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8277 6 +     48891 AAAGAA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6035 6 +      6687 GTGTAA
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6720 6 -     36432 AAAGAA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141926 6 -    630532 ATAGAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68790 6 +     83186 AGAGAA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               4961 6 +     12352 ATAGAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12145 6 +     55766 ATAGAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051743 6 + 191637585 ATAGAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800621 6 +  11177569 ATAGAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3568 6 -    135385 ATAGAA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385940 6 +   7955117 ATAGAA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1421 6 +     11955 ATAGAA
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2247 6 -     16823 AAAGAA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238753 6 +   9596543 ATCcaa
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64726 6 -     97402 AAAGAA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42366 6 +    110728 ATAAAA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14758560 6 +  30322482 ATAGAA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3280 6 -     13097 GTAGAA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3034 6 +      5940 GTAGAA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2864 6 -      5717 ATAGAA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9240 6 -     11567 ATAGAA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10621 6 -     12945 ATAGAA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8089 6 +     29618 ATAGCA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8085 6 +     31569 ATAGCA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8095 6 +     24756 ATAGCA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8095 6 +     16388 ATAGCA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812612 6 -   3914936 atAGAA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16936 6 +     24238 ATAAAA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333767 6 +    662738 AAAGAA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               332988 6 -   1826925 ACAGAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9673 6 +     19643 ATAGAA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043330 6 -   6120653 ATAGAA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080111 6 +  43346337 ACATAA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613748 6 +  59628241 ataggA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44372 6 -     61512 ACAGAA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372034 6 -  60120075 ACAGAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24297 6 +     30207 ACAGAA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21400 6 -     24934 ACAGAA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24250 6 +     30527 ACAGAA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35426 6 -     50087 ACAGAA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45170 6 +     51645 ACAGAA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414373 6 - 187317192 ACAGAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398603 6 +  25927173 ACAGAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47775 6 -     62418 ACAGAA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  313 6 +     14901 ACAGAA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44247 6 +     59329 ACAGAA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270155 6 +    668171 ACAGAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  431 6 +      1732 ACAGAA
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1953 6 +     17132 ACAGAA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321452 6 +  24302211 ACAGAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356284 6 -    752769 ACAGAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672633 6 -    737560 ACAGAA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219917 6 +    317179 ACAGAA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500160 6 +  40650429 ATAGAA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25301 6 -     74585 AGAGAA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49250 6 -    140813 ATAGAA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428346 6 +  29670104 gtagaa
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80311 6 +     93471 AAAGAA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9405 6 +     17804 ATAGAA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9907 6 -     12984 ATAGAA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18221 6 -     26561 ATAGAA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983698 6 +  93316391 GTAGCA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44869 4 +    145209 CA--AA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961562 5 +  27267610 gtaga-
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21460 6 -     27822 ACAGAA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7619 6 +     27589 ATAGAA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51487 6 -     62432 ATAGCA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352203 6 +    437263 AAAGAA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24638 6 -     82753 AAAGCA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17625 6 -     63510 AGAGAA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mus_caroli.LT608237.1                                   35592291 6 + 120012414 gcagaa
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686676 6 + 129401213 gcagaa
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216533 6 +  89631738 GTAgaa
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495972 6 + 130317789 gcagaa
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81970 6 -     86153 ATGAAA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354231 6 +  14710649 agagaa
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118710 6 +    130748 CTCTGA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945323 6 +   3037898 acagaa
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28111 6 +     34575 ATAGCA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468214 6 -  31847680 atAGAA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226372 6 -   7148211 aAAGAA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127344 2 -    149072 ac----
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52853 6 -    132029 ATAGAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8948 6 -     16345 ATAGAA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14833 6 +     22201 ATAGAA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413054 6 -  22158432 ATAGAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25231 6 -     54323 ATAGAA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197341 6 +   9404916 atagga
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635701 6 + 196305487 ATACAA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2459 6 -      3937 ATACAA
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563966 6 - 199412804 ATACAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550303 6 -   3988456 ATAAAA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053764 6 -  11899542 ATAGAA
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450811 6 +   2017862 atAGAA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435403 6 -    630418 AAAGAA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13403 6 +    150152 AAAGAA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91898 5 -    140218 GTAGA-
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2792 6 -     41509 GTATAA
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095642 6 +  10937097 AAAGAA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12750 6 -     14239 ATGTAA
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102772 6 - 174332312 ataaaa
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38388 6 +    559221 ataggA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39070 6 -     51505 atagaa
i Otolemur_crassicaudatus.k141_649260                    C 0 I 200
s Otolemur_garnettii.GL873799.1                             352073 6 +   1103335 ATAGAA
i Otolemur_garnettii.GL873799.1                          C 0 I 200
s Ovis_aries.CM001607.2                                   26403397 6 -  44047080 AAAGAA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3916 6 +     17875 AAAGAA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471947 6 - 189151597 ATAGAT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23554 6 -    230217 AGAGAA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460880 6 -  18783137 AGAGAA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971600 6 +   8748460 AGAGAA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614835 6 +   2937107 AAAGAA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242285 6 - 183742232 ACAGAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8747 6 +     21308 ACAGAA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291321 6 -  20919399 ACAGAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21395 6 -     27687 ACAGAA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14541 6 +     16796 ACAGAA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21352 6 -     23640 ACAGAA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14208 6 +     78924 AGAGAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25483 6 +     31479 ATAGAG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17852 6 -     24908 ATAGAG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         905 6 +      9367 AAATAA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245988 6 +  18517816 Gtacaa
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11497 6 -     15039 AAAGAA
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1559 6 +     55023 ATAGAA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1109 6 -     89929 ATAGAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1698 6 +     40849 ATAGAA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253362 6 +  14605196 ATAGAA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             64003 6 +    207309 ATACAG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5096 6 -     25401 ATACAG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30839 6 +     58159 ATACAG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31115 6 +     63561 ATACAG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30875 6 +     51148 ATACAG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555845 6 -   4542175 ATACAG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30859 6 +     51125 ATACAG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3584 6 -      8168 AAAGAG
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7262 6 +     39866 ATAGAA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2346 6 -      9282 ATAGAA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41750 6 -     87950 ATAGAA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42144 6 -     88961 ATAGAA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6842 6 -     39403 ATAGAA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41793 6 +     87928 ATAGAA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6839 6 -     60166 ATAGAA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13776 6 -     67232 ATAGAA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41692 6 -     90634 ATAGAA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43159 6 +     89403 ATAGAA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177071 6 - 189387572 ATAGAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191888 6 -   9816681 ATAGAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26694 6 +     69807 ATAGAA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43890 6 -     80239 ATAGAA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2421 6 +      3019 ATGTAA
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981715 6 +   4620579 ATAGAA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565183 6 -   2598838 ATAGAA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2819 6 -      7103 ATAGAA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3416 6 -     11706 ATAGAA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7152 6 -     30655 ATAGAA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33477 6 +     46564 ATAGAA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93748 6 -     98465 ATAGAA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7385 6 +     35169 ATAGAA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36591 6 +     52041 atagaa
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3800 6 -     18639 AGAGAA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098194 6 +  38429054 AGAGAA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26068 6 +     91421 ATAGAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152560 6 -   7812017 ATAGAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6935 6 +     72585 ATAGAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52322 6 +     55069 AAAGAA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021889 6 -  90668790 GTAGAA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_778604                              640 6 +      7119 ATAGAA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121248 6 + 195417433 ATAGAA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235490 6 -   7961872 ATAGAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               3142 6 +     27962 ATAGAA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3037 6 +      6077 ATAGAA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3128 6 +      5971 ATAGAA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3050 6 +      5932 ATAGAA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1392 6 -      4390 ATAGAA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390827 6 - 209938924 ATAGAA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                2999 6 +      5979 ATAGAA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3761 6 -      4301 ATAGAA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6989 6 +     16473 AAAGAA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108164 6 + 121099817 ATAGAA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29731 6 -     47369 ATAGAA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30117 6 -     79414 ATAGAA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26808 6 -     34454 ATAGAA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14211 6 -     22428 ATAGAA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29363 6 -     47109 ATAGAA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237421 6 +   5703754 ACAGAA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7011 6 +     21866 ACAGAA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         24387 6 +     27374 ATAGAA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27901 6 +     58920 ATAGAA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14397 6 -     45317 ATAGAA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22056 6 -     42441 ATAGAA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24734 6 -     29113 ATAGAA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27808 6 -     48123 ATAGAA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48364 6 +     77746 GTAGAA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857426 6 -   1910179 ATACAA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670068 6 +  18376816 gcatga
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867520 6 +   3870691 ATAGAA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5790 6 -     97271 ATAGAA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124029 6 +    196729 AGAGAA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390315 6 +   1523678 ATAGAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1826 6 +      5583 CTCTGG
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190724 3 +    199430 ---GAA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104676 3 -    539355 ---GAA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6007 6 +      6850 ATAGAA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6058 6 +     20590 ATAGAA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352271 6 - 186847797 ACAGAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18930 6 -     31044 ATACAA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19933 6 +     26378 ATAGAA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32611 6 -     78344 ATAGAA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19258 6 +     25722 ATAGAA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27563 6 -     62838 ATAGAA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27609 6 +     46913 ATAGAA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8418 6 -     28527 ATAGAA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29500 6 -     64340 ATAGAA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27537 6 -     63452 ATAGAA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8982 6 +     22490 ATAGAA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2408 6 -      6147 ATAGAA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9313 6 -     13050 ATAGAA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254553 6 -   6242583 ATAGAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         577 6 +     19340 ATAGAA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172603 6 -    200418 AAAGAA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479571 6 -  10818551 ACATAA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832950 6 -   4065304 CTAGAA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7218 6 -     70247 CTAGAA
i Tupaia_tana.TupTan_flattened_line_394                  I 1 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360377 6 -  33153633 AAAGAA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Ursus_maritimus.KK499267.1                                180968 6 +   5085361 ttaTAA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24359 6 -     30710 ATAGAA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23266 6 -    147434 ATAGAA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75452 6 +   5488506 AAAGAA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104110 6 -    112863 ATAGGA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173299 6 -    224448 ATAGAA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28006 6 -     86975 ATAGAA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       302 6 -       753 ATACAA
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595              14 6 +      1812 AAAGAA
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Dasyprocta_punctata.DasPun_flattened_line_15900            27201 0 +     75252 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70923 0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  9462 0 +     14636 C
e Cuniculus_paca.CunPac_flattened_line_7025                   3402 0 +     36344 C
e Cavia_tschudii.CavTsc_scaffold_23560                       62041 0 -     66877 C
e Cavia_porcellus.DS562891.1                               4998960 0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4995518 0 +  23392119 C
e Desmodus_rotundus.KZ672289.1                            11864287 0 -  20541912 C
e Carollia_perspicillata.CarPer_scaffold_668536                479 9 -      1021 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  4544 0 -     15198 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    2838 0 -     21056 C
e Tonatia_saurophila.TonSau_scaffold_294                    479307 0 -    610378 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                13264 0 +     22964 C
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    115087 0 +    313613 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73909 0 -    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                       2913897 0 +   3329780 C
e Pteropus_vampyrus.KN525825.1                             3536510 0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5840001 0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            51279 0 -     66298 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             2860 0 +     22231 C
e Myotis_myotis.MyoMyo_scaffold_66571                         1334 0 +     18357 C
e Myotis_lucifugus.GL429869.1                               382506 0 +   4330536 C
e Myotis_davidii.KB100139.1                                4386687 0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9792527 0 +  10118263 C
e Murina_feae.MurFea_scaffold_17764                          38277 0 +     47283 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 178396 0 +    366855 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             41238 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6362337 0 -   8254450 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                184233 0 +    200668 C
e Megaderma_lyra.MegLyr_scaffold_4542                       149476 0 +    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                222315 0 -    270270 C
e Lasiurus_borealis.LasBor_scaffold_16567                    61779 0 -     65777 C
e Hipposideros_galeritus.HipGal_scaffold_23202               49879 0 +     49977 C
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Eptesicus_fuscus.JH977646.1                             12577919 0 +  14770903 C
e Eidolon_helvum.AWHC01266696.1                               5351 0 +     19438 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          1888 0 -      8242 C
e Condylura_cristata.JH655891.1                           35806293 0 +  53390261 C
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C
e Anoura_caudifer.AnoCau_scaffold_1412                      176265 0 -    412891 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4610 17 +     36723 TGCTT----T-------AAATTATTGTA
s Acinonyx_jubatus.LLWD01001279.1                           811939 17 +   1699592 TGCtc----t-------gaaataattta
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24259 17 +     63021 CTATT----T-------GAAATTTTATC
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414468 17 +  29979442 TGTTC----T-------AAATTATTTCA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214781 17 +    347723 tttta----t-------aaattatttca
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17200 17 -     61208 TTATT----T-------AAAATATTATG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46926 17 +     53615 TACTC----T-------AAATTGTTATA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42887 17 +     44087 TACTC----T-------AAATTATTATA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15512 17 -     21945 TACTC----T-------AAATTATTATA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17195 17 +     32033 TACTC----T-------AAATTATTATA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71366 17 -     84148 TGCTC----T-------AAATTATTATA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43605 17 -     78289 TGCTC----T-------AAATTATCATA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43044 17 +     55831 TGCTC----T-------AAATTATTATA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41494 17 -     64179 TGCTC----T-------AAATTATTATA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23133 13 -     24835 TGCTC----T-------AAATTAT----
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40119 17 +     45454 TGCTC----T-------AAATTATTATA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45765 17 +     70886 TGCTC----T-------AAATTATTACA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7941 17 +     30854 TGCTC----T-------AAATTATTATA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32077 17 +     42133 TGCTC----T-------AAATTATTATA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584464 17 +   2318259 TGCTC----T-------CAATGATTATG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176265  8 -    412891 ------------------ACTGT--AAT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49561 17 -     68529 TGCTC----T-------CAATGGTTATG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     320 17 +     17741 TGCTC----T-------AAATTATTATA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              945 17 -     15923 TGCTC----T-------AAATTATTATA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1220 17 -     16391 TGCTC----T-------AAATTATTATA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                780 17 -     17186 TGCTC----T-------AAATTATTATA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15164 17 -     32367 TGTTT----T-------GCATTATTACA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18702 17 -     45910 TGTTC----T-------ACATTATTACA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4544  9 -     15198 -----------------TACTGG--AAT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273829 17 +  21539123 TGCTC----T-------AAATTATTATA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               9996 17 +     48076 TGCTC----T-------AAATTATTATA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5133 17 -     28759 TGCTC----T-------AAATTATTATA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32686 17 +     44353 TGCTC----T-------AAATTATTATA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48056 17 -     71267 TGCTC----T-------AAATTATTATA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22115 17 -     33135 TGCTC----T-------AAATTATTATA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5305 17 +     11645 TGCTC----T-------GCATTATTGCA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5311 17 -     19611 TGCTC----T-------GCATTATTGCA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956137 17 -  23207421 TGCTC----T-------CAATTATTATG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3346 17 -      4711 TGCTC----T-------CAATTATTATG
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85455 17 +    124022 TGCTC----T-------CAATGATTATG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     20987 17 +    288883 TGCTC----T-------CAATGATTCTG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355373 17 +  48749331 TGCTC----T-------CAATGNTTCTG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753941 17 +   1948126 TGCTC----T-------CAATGATTCTG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544080 17 -  45695690 TGCTC----T-------CAATGCTTCTG
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529105 17 -   4408762 TGCTC----T-------CAATGATTCTG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7002 17 +     28062 TGTTC----T-------AAATTATTATA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42296 17 -     91139 TGTTC----T-------AAATTATTATA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19822 17 +     95584 TGTTC----T-------AAATTATTATA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19735 17 +    119600 TGTTC----T-------AAATTATTATA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9302 17 +     18648 TGCTC----T-------AAATTATTATA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8841 17 -     13885 TGCTC----T-------AAATTATTGTA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             907 17 -      8861 TGCTC----T-------ACATTATTATA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453300 17 + 189096842 TGCTC----T-------AAATTATTATA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                822 17 +      8664 TGCTC----T-------AAATTATTATA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630124 17 +  17673402 TGCTC----T-------CAATTATTGCA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664410 17 +   7040546 TGCTC----T-------CAATTATTGCA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208070 17 +   1652518 TGCTC----T-------CAATTATTGCA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504485 17 +  60362399 TGCTC----T-------AAATTATTTCA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8121 17 -     23171 TGCTC----T-------AAATTATTTCA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221464 17 +   9314153 TGctc----t-------aaattatttca
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614599 17 +  59632846 TGctc----t-------aaattatttca
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106180 17 -  63665305 TGctc----t-------aaattatttca
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408176 17 -  46296322 TGCTC----T-------CAATGATTATG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590449 17 +  44709034 TGCTC----T-------CAATGATTATG
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    642 13 -      1880 TGCTT----T-------AA----TTACC
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269389 17 +    496798 TGCTt----t-------aaattattaca
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               4846  9 +      5315 -----------------TGCTGG--AAT
i Carollia_perspicillata.CarPer_scaffold_170178          I 8 I 16
s Castor_canadensis.CasCan_scaffold_39952                    26803 17 -     39886 TTATT----T-------AAATTATTACA
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78421 17 -    217609 TGCTC----T-------CAATTATTACA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995518 16 +  23392119 -actt----t-------aatttATTGCc
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998960 16 +  23407841 -actt----t-------aattTATTACC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62041 16 -     66877 -ACTT----T-------AATTTATTACC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4220 17 -     12580 TGCTC----T-------AAATTATTATA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42278 17 +     53515 TGCTC----T-------AAATTATTATA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370209 17 -  26074798 TGCTC----T-------AAATTATTATA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7098 17 -     34880 TGCTC----T-------AAATTATTATA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66193 17 -     89041 TGCTC----T-------AAATTATTACA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1318 17 -      5494 TGCTT----T-------AAATTATTACA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491275 17 -  27778364 TGCTC----t-------aaattattaca
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18108 17 +     27315 TGCTC----T-------AAATTATTACA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140109 17 -   4669795 TGCtc----t-------aaattattata
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43851 17 +     47900 TGCTC----T-------AAATTATTATA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43676 17 -     44860 TGCTC----T-------AAATTATTATA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43664 17 -    148725 TGCTC----T-------AAATTATTATA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25881 17 -     40656 TACTC----T-------AAATTATTATA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5847 17 +     20796 TACTC----T-------AAATTATTATA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10924 17 -     17524 TACTC----T-------AAATTATTATA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26646 17 -     34525 TACTC----T-------AAATTATTATA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10467 17 -     25376 TACTC----T-------AAATTATTATA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363067 13 -  39242232 TACTC----T-------AA----TTATA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268779 17 +  21565898 TACTC----T-------AAATTATTATA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31113 17 -     45857 TACTC----T-------AAATTATTATA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26052 17 -     32606 TACTC----T-------AAATTATTATA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2211 17 +      8499 TACTC----T-------AAATTATTATA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24609 17 +     70610 TACTC----T-------AAATTATTATA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21538 17 +     36323 TACTC----T-------AAATTATCATA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11904 17 -     19938 TGCTC----T-------CAATTGTTACA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29722 17 -     33796 TGCTC----T-------ACATTATCGCA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4239 17 -     15404 TGCTC----T-------ACATTATCGCA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8100 17 -     32913 TATTC----T-------AAATTATTATA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18513 17 -     40346 TATTC----T-------AAATTATTATA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18768 17 +    216457 TATTC----T-------AAATTATTATA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18561 17 +     39636 TATTC----T-------AAATTATTATA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237967 17 -   2543920 CACTT----T-------aatttattacc
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3150 17 +      5346 TGCTC----T-------AAATTATTATA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41633 17 -    112038 TGTTC----T-------AAATTATTATA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7204 17 +     34062 TGCTC----T-------AAATTATTATA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342429 17 +  18827391 TACTC----T-------AAATTATTATA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8976 17 -     44032 TACTC----T-------AAATTATTATA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303753 17 - 135778131 TActc----t-------aaattattata
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13873 17 +     15858 TGCTC----T-------AAATTGTTACA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605449 17 -    839153 TGCTC----T-------AAATTGTTACA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408191 17 -   2368649 TGctc----t-------aaattattata
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378066 17 - 200372422 TGCTC----T-------AAATTATTATA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1615 17 -     84244 TGCTC----T-------AAATTATTATA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806293 15 +  53390261 --CCC----T-------AAATCTCTGCA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1888  8 -      8242 ------------------AATAG--AAA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43429 17 -     83289 TTATT----T-------AAAATTTTTAC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113836 17 - 224834208 ttatt----t-------aaaaatgtatc
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6173  4 +     12657 tgct------------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 390
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3391 17 +     87169 TGCTC----T-------AAATTAATTCA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644104 17 -   1526836 TGCTG----T-------CAATTATTGTG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16950 24 +     50838 TGCTT----TATTCTATAATTTATTACC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3402 16 +     36344 -ACTT----T-------AATTTATTGTC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27201 16 +     75252 -ACTT----T-------AATTTATTGCC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109248 17 -   2246927 TGCAC----t-------caattattaca
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291651 17 +  12879189 TGCTC----T-------ACATTATTACA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624466 17 -  35494412 TGCTC----T-------CAATTATTACG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864287  9 -  20541912 -----------------AACTGG--AAT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663564 17 -   1390856 TGCTc----t-------aaatttttaca
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138352 17 -    198055 TGCTC----T-------AAATTATTACA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97957 17 -    115145 CACTT----T-------AATTTGTTACC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949579 17 -  37912305 ttatt----a-------aaattatcacA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4514 17 -     10735 TTATT----A-------AAATTATCACA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9462 16 +     14636 -ACTT----T-------AATTTATTGCC
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853818 21 - 111700974 TGCTTTATTT-------AAATTGTTACA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5351  8 +     19438 ------------------aatag--aaa
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238833 17 -    607251 TGCTC----T-------CAATGATTATG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107643 17 -  10337057 TGTTC----T-------AAACTGTTACA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30119 13 +    110024 ----T----T-------AAAATTTTACc
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12106 13 +     18970 ----T----T-------AAAATTTTACc
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915203 17 +  41312741 ttttc----t-------gaaatatttca
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577919  8 +  14770903 ------------------ACGGG--AAT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040437 17 -   4378816 TGCTG----T-------AAATTAgtaca
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374361 17 +  39960074 TGCTG----T-------AAATTAgtaca
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411147 17 -    498745 TGCTG----T-------AAATTAgtaca
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3664920 17 +   7059049 TACTC----T-------AGATTCTTACA
i Erinaceus_europaeus.JH835339.1                         C 0 I 285
s Erythrocebus_patas.Contig38                               261956 17 +  21539334 TACTC----T-------AAATTATTATA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64016 17 -    133382 TGCTC----T-------CAATTATTACG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4233 17 +      7672 TGCTC----T-------CAATTATTACG
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13848 17 -     24895 TGCTC----T-------ACATTACTGCA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41557 17 -     70999 TGCTC----T-------ACATTACTGCA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85519 17 +    112731 TGCTC----T-------ACATTACTGCA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42088 17 +     68309 TGCTC----T-------ACATTACTGCA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52414 17 -     65740 TGCTC----T-------ACATTACTGCA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23043 17 -     75513 TGCTC----T-------ACATTACTGCA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47240 17 -     97555 TGCTC----T-------ACATTACTGCA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3965 17 +     30972 TGCTC----T-------ACATTATTGCA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41685 17 -     52037 TGCTC----T-------ACATTACTGCA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58087 17 -    111500 TGCTC----T-------ACATTACTGCA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245848 17 - 206538554 TGCtc----t-------gaaataattta
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115634 17 - 205367284 TGCtc----t-------gaaataattta
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26735 17 -     30238 TGCTC----T-------GAAATAATTTA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124116 17 -    137831 tgttc----t-------acattattaca
i Galago_moholi.ctg3793                                  I 200 C 0
s Galago_senegalensis.k141_991736                             7661 17 +     22493 tgttc----t-------acattattaca
i Galago_senegalensis.k141_991736                        I 200 C 0
s Galagoides_demidoff.k141_561628                            19718 17 -     32986 tgttc----t-------acattattaca
i Galagoides_demidoff.k141_561628                        I 200 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 248 17 -     28519 TGCTC----C-------AAACTATTACA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90525 17 -     95226 TGCTC----T-------CAAGGATTATG
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33373 17 -     36801 TGTTT----T-------AAATTATTACA
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4912 17 -      8343 TGCTC----T-------AAATTATTGTA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 70409 17 +  33314783 TGCTC----T-------AAATTATTGTA
i Gorilla_gorilla.LT578336.1                             I 75 I 1242
s Graphiurus_murinus.GraMur_scaffold_10447                     866 17 -     78134 TGTTT----T-------AAATTTTTACA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13773 17 -     40692 TGCTC----T-------ACATTACTGCA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35175 17 +     49394 TGCTC----T-------ACATTACTGCA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60043 17 -     66874 TGCTC----T-------ACATTACTGCA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8917 17 -     42923 TGCTC----T-------ACATTACTGCA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15917 17 -     53142 TGCTC----T-------ACATTACTGCA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29879 17 -    327341 TGCTC----T-------AAATTAATTCA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8283 17 +     48891 TGCTC----T-------CGATGATTATG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6041 14 +      6687 GGTTT----T-------ACATTGTT---
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6726 17 -     36432 TGCTC----T-------CAATTATTACG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49879  8 +     49977 ------------------ATTCA--AAA
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141932 17 -    630532 TGCTC----T-------AAATTATTATA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68796 17 +     83186 TGCTC----T-------AAATTAATTCA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70923 16 +    143317 -ACTT----T-------AATTTATTGCC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4967 17 +     12352 TGCTC----T-------AAATTATTATA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12151 17 +     55766 TGCTC----T-------AAATTATTATA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051749 17 + 191637585 TGCTC----T-------AAATTATTATA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800627 17 +  11177569 TGCTC----T-------AAATTATTATA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3574 17 -    135385 TACTT----T-------AATTTATTACC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385946 17 +   7955117 TGCTT----T-------AAGTTATTCCA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1427 17 +     11955 TGCTC----T-------GCATTATTGCA
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2253 17 -     16823 TGCTC----T-------CAATTATTACG
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238759 17 +   9596543 ctatt----t-------aaaatattgtg
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64732 17 -     97402 TGCTC----T-------CAATTATTACG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42372 17 +    110728 TGTTC----T-------AAATTACTATA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61779  8 -     65777 ------------------ACTGG--GAT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758566 17 +  30322482 TGCTC----T-------ACATTACTGCA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3286 17 -     13097 TGCTC----T-------AAATTATTATA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3040 17 +      5940 TGCTC----T-------AAATTATTATA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2870 17 -      5717 TGCTC----T-------AAATTCTTATA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9246 17 -     11567 TGCTC----T-------AAATTATTACA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10627 17 -     12945 TGCTC----T-------AAATTATTACA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8095 17 +     29618 TACTT----T-------ACATTATTGCA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8091 17 +     31569 TACTT----T-------ACATTATTGCA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8101 17 +     24756 TACTT----T-------ACATTATTGCA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8101 17 +     16388 TACTT----T-------ACATTATTGCA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812618 17 -   3914936 TGTTC----T-------AAATTATTTCA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16942 17 +     24238 TGCTC----T-------AAGTTGTTACA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333773 17 +    662738 TGTTC----T-------CAATTATTACG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               332994 17 -   1826925 TGCTC----T-------AAATTATTATA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9679 17 +     19643 TGTTC----T-------ACATTATTACA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043336 17 -   6120653 TGTTC----T-------ACATTATTACA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080117 17 +  43346337 TGCTC----T-------ACGTCGttaca
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613754 17 +  59628241 TGctc----t-------aaattatttca
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44378 17 -     61512 TGCTC----T-------AAATTATTATA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372040 17 -  60120075 TGCTC----T-------AAATTATTATA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24303 17 +     30207 TGCTC----T-------AAATTATTATA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21406 17 -     24934 TGCTC----T-------AAATTATTATA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24256 17 +     30527 TGCTC----T-------AAATTATTATA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35432 17 -     50087 TGCTC----T-------AAATTATTATA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45176 17 +     51645 TGCTC----T-------AAATTATTATA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414379 17 - 187317192 TGctc----t-------aaattattata
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398609 17 +  25927173 TGCtc----t-------aaattattata
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47781 17 -     62418 TGCTC----T-------AAATTATTATA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  319 17 +     14901 TGCTC----T-------AAATTATTATA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44253 17 +     59329 TGCTC----T-------AAATTATTATA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270161 17 +    668171 TGCTC----T-------AAATTATTATA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  437 17 +      1732 TGCTC----T-------AAATTATTATA
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1959 17 +     17132 TGCTC----T-------AAATTATTATA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222315  8 -    270270 ------------------AATAG--AAA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321458 17 +  24302211 TGCTC----T-------AAATTATTATA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356290 17 -    752769 TGCTC----T-------AAATTATTATA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672639 17 -    737560 TGCTT----T-------AAATTATTACA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219923 17 +    317179 TGCTC----T-------AAATTATTACA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500166 17 +  40650429 TGCTT----T-------AAGTTATTACA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149476  8 +    207569 ------------------AGTCA--AAA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25307 17 -     74585 TTTTC----T-------AAAATATTTCA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49256 17 -    140813 TTATT----T-------AAAATTTTATC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428352 11 +  29670104 ttatt----t-------taa------ta
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80317 17 +     93471 TGCTC----T-------CAATTATTACG
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9411 17 +     17804 TGCTC----T-------AAATTATTATA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9913 17 -     12984 TGCTC----T-------AAATTATTATA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18227 17 -     26561 TGCTC----T-------AAATTATTATA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983704 17 +  93316391 TGCTG----T-------ACTTCATTGCA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44873 17 +    145209 TGCTT----T-------AAATTGTTACA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184233  9 +    200668 -----------------AACGGA--AAT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961567 13 +  27267610 ----t----t-------aaaattttaaa
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362337  7 -   8254450 ------------------actgg--aa-
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41238  7 -     48117 ------------------ACTGG--AA-
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21466 17 -     27822 TACTC----T-------AAATTATTATA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7625 17 +     27589 TGTTC----T-------AAATTATTTCA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51493 17 -     62432 TGCTC----T-------ACTTTATTGCA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352209 17 +    437263 TGCTC----T-------CAATTATTACG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178396  9 +    366855 -----------------AACTGC--AGT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_13123                  24644 17 -     82753 TGCTC----T-------CAATGATTATG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17631 17 -     63510 TGCTC----T-------AAATTAATTCA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38277  8 +     47283 ------------------ACTGG--AAT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592297 17 + 120012414 ttatt----t-------aaaaatttatc
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686682 17 + 129401213 ttatt----t-------aaaattttatc
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216539 17 +  89631738 ttatt----t-------acaattttatc
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495978 17 + 130317789 ttatt----t-------aaaattttatc
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81976 17 -     86153 TGTTT----T-------AAATTATTACA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354237 16 +  14710649 tt-tc----t-------aaaatatttca
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792527  8 +  10118263 ------------------actgg--aat
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386687  8 +   6019432 ------------------ACtgg--aat
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382506  8 +   4330536 ------------------actgg--aat
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1334  8 +     18357 ------------------ACTGG--AAT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118716 17 +    130748 CACTC----T-------AAATTTTTACA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945329 17 +   3037898 ttatt----t-------aaaattttaca
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28117 17 +     34575 TCCTC----T-------AAATTATTATA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468220 17 -  31847680 TGTTC----T-------AAATTATTTca
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226378 17 -   7148211 TGCTC----T-------CAATTATTACG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127346  6 -    149072 --------------------tgt--aat
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52859 17 -    132029 TGCTC----T-------AAATTATTATA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8954 17 -     16345 TGCTC----T-------AAATTATTATA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14839 17 +     22201 TGCTC----T-------AAATTATTATA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413060 17 -  22158432 TGCTC----T-------AAATTATTATA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25237 17 -     54323 TGCTC----T-------AAATTATTATA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197347 17 +   9404916 tgttc----t-------aaattatttca
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635707 17 + 196305487 TGTTC----T-------ACATTATTACA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2465 17 -      3937 TGTTC----T-------ACATTATTACA
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563972 17 - 199412804 TGTTC----T-------ACATTATTACA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550309 16 -   3988456 TGCTC----C-------AAGTT-TTACA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053770 17 -  11899542 TGCTT----T-------AATTTATTAcc
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450817 17 +   2017862 TGTTC----T-------AAATTATTTca
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435409 17 -    630418 TGCTC----T-------CAATGATTATG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13409 17 +    150152 TGCTC----T-------CAAGGATTATG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91903 12 -    140218 ----T----T-------AAAAT-TTACC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2798 17 -     41509 TTATT----T-------GAAATTTTATC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095648 17 +  10937097 TGCTC----t-------caattattaca
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12756 17 -     14239 TACAC----T-------AAATTGTTACA
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102778 17 - 174332312 tgctC----T-------AAGTTGTTACA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38394 17 +    559221 TGCTC----T-------AAAATACTTCa
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39276 17 -     51505 tgttc----t-------acattattaca
i Otolemur_crassicaudatus.k141_649260                    I 200 C 0
s Otolemur_garnettii.GL873799.1                             352279 17 +   1103335 tgttc----t-------acATTATTACA
i Otolemur_garnettii.GL873799.1                          I 200 C 0
s Ovis_aries.CM001607.2                                   26403403 17 -  44047080 TGCTC----T-------CAATGATTATG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3922 17 +     17875 TGCTC----T-------CAATGATTATG
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471953 17 - 189151597 TGCTC----T-------AAATTATTGTA
i Pan_troglodytes.CM009242.2                             C 0 I 5
s Panthera_onca.PanOnc_flattened_line_3271                   23560 17 -    230217 TGCTC----T-------GAAATAATTTA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460886 17 -  18783137 TGCtc----t-------gaaataattta
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971606 17 +   8748460 TGctc----t-------gaaataattta
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614841 17 +   2937107 TGCTC----T-------CAATGattatg
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242291 17 - 183742232 TGCtc----t-------aaattattata
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8753 17 +     21308 TGCTC----T-------AAATTATTATA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291327 17 -  20919399 TGCTC----T-------AAATTATTATA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21401 17 -     27687 TGCTC----T-------AAATTATTATA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14547 17 +     16796 TGCTC----T-------AAATTATTATA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21358 17 -     23640 TGCTC----T-------AAATTATTATA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14214 17 +     78924 TGCTC----T-------AAATCAATTCA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25489 17 +     31479 TGTTC----T-------ACATTATTACA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17858 17 -     24908 TGTTC----T-------ACATTATTACA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         911 17 +      9367 TTATT----G-------AAATTGTCACA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         245994 17 +  18517816 ttatt----t-------gaaattttatc
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11503 17 -     15039 TGCTC----T-------CAATTATTACG
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1565 17 +     55023 TGCTC----T-------AAATTATTATA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1115 17 -     89929 TGCTC----T-------AAATTATTATA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1704 17 +     40849 TGCTC----T-------AAATTATTATA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253368 17 +  14605196 TGctc----t-------aaattattata
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2860  8 +     22231 ------------------ATGGG--AAT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64009 17 +    207309 TGTTC----T-------AAATTATTATA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5102 17 -     25401 TGTTC----T-------AAATTATTATA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30845 17 +     58159 TGTTC----T-------AAATTATTATA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31121 17 +     63561 TGTTC----T-------AAATTATTATA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30881 17 +     51148 TGTTC----T-------AAATTATTATA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555851 17 -   4542175 TGTTC----T-------AAATTATTATA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30865 17 +     51125 TGTTC----T-------AAATTATTATA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3590 17 -      8168 TGCTC----T-------CAATTATTACG
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7268 17 +     39866 TATTC----T-------AAATTATTATA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2352 17 -      9282 TATTC----T-------AAATTATTATA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41756 17 -     87950 TATTC----T-------AAATTATTATA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42150 17 -     88961 TATTC----T-------AAATTATTATA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6848 17 -     39403 TATTC----T-------AAATTATTATA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41799 17 +     87928 TATTC----T-------AAATTATTATA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6845 17 -     60166 TATTC----T-------AAATTATTATA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13782 17 -     67232 TATTC----T-------AAATTATTATA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41698 17 -     90634 TATTC----T-------AAATTATTATA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43165 17 +     89403 TATTC----T-------AAATTATTATA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177077 17 - 189387572 TGCTC----T-------AAATTATTGTA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191894 17 -   9816681 TGCTC----T-------AAATTATTGTA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26700 17 +     69807 TGCTC----T-------AAATTATTATA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43896 17 -     80239 TGCTC----T-------AAATTATTATA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2427 14 +      3019 GGCTT----T-------ACATTGTT---
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981721 17 +   4620579 TGCTC----T-------ACATTACTGCA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565189 17 -   2598838 TGCTC----T-------GCATTATTGCA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2825 17 -      7103 TGCTC----T-------GCATTATTGCA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3422 17 -     11706 TGCTC----T-------GCATTATTGCA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7158 17 -     30655 TGCTC----T-------GCATTATTGCA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33483 17 +     46564 TGCTC----T-------GCATTATTGCA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93754 17 -     98465 TGCTC----T-------GCATTATTGCA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7391 17 +     35169 TGCTC----T-------GCATTATTGCA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36597 17 +     52041 ttatt----t-------aaaattttatc
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51279  9 -     66298 -----------------AACcgg--aat
i Pteronotus_parnellii.KE847780.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3806 17 -     18639 TTTTC----T-------GAAATATTTCA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840001  8 -  28871421 ------------------aatag--aaa
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536510  8 -   4952924 ------------------aatag--aaa
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098200 17 +  38429054 TGCtc----t-------gaaataattta
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26074 17 +     91421 TGCTC----T-------AAATTATTATA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152566 17 -   7812017 TGCTC----T-------AAATTATTATA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6941 17 +     72585 TGCTC----T-------AAATTATTATA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52328 17 +     55069 TGCTC----T-------CAATGATTACG
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021895 17 -  90668790 TCATT----T-------AACATTTTATC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913897  8 +   3329780 ------------------aatca--aaa
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              646 17 +      7119 TGCTC----T-------AAATTATTATA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121254 17 + 195417433 TGCtc----t-------aaattattata
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235496 17 -   7961872 TGCTC----T-------AAATTATTATA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73909  8 -    116970 ------------------AATAG--AAA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3148 17 +     27962 TGCTC----T-------AAATTATTATA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3043 17 +      6077 TGCTC----T-------AAATTATTATA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3134 17 +      5971 TGCTC----T-------AAATTATTATA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3056 17 +      5932 TGCTC----T-------AAATTATTATA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1398 17 -      4390 TGCTC----T-------AAATTATTATA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390833 17 - 209938924 TGCTC----T-------AAATTATTATA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3005 17 +      5979 TGCTC----T-------AAATTATTATA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3767 17 -      4301 TGCTC----T-------AAATTATTATA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        6995 17 +     16473 TGCTC----T-------CAATGATTATG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108170 17 + 121099817 TGCTC----t-------aaattattatt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29737 17 -     47369 TGCTC----T-------AAATTATTATT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30123 17 -     79414 TGCTC----T-------AAATTATTATT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26814 17 -     34454 TGCTC----T-------AAATTATTATT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14217 17 -     22428 TGCTC----T-------AAATTATTATT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29369 17 -     47109 TGCTC----T-------AAATTATTATT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237427 17 +   5703754 TGCTC----T-------AAATTATTATA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7017 17 +     21866 TGCTC----T-------AAATTATTATA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115087 15 +    313613 --CCT----T-------AAGTCCTTATA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24393 17 +     27374 TGCTC----T-------AAATTATTATA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27907 17 +     58920 TGCTC----T-------AACTTATTATA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14403 17 -     45317 TGCTC----T-------AACTTATTATA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22062 17 -     42441 TGCTC----T-------AAATTATTATA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24740 17 -     29113 TGCTC----T-------AACTTATTATA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27814 17 -     48123 TGCTC----T-------AAATTATTATA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48370 17 +     77746 TTATT----T-------AAATTTTTGTC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857432 17 -   1910179 TGCTC----T-------AAGTTATTACA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670074  4 +  18376816 tcct------------------------
i Sorex_araneus.JH798187.1                               C 0 I 397
s Spermophilus_dauricus.KZ294078.1                         1867526 17 +   3870691 TGTTT----T-------AAGTTATGACA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5796 17 -     97271 TTTTC----T-------AAATTATTTCA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124035 17 +    196729 TGCTC----T-------AAATTAATTCA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390321 17 +   1523678 TGCTC----T-------AAATTATTATA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13264  8 +     22964 ------------------ACTGG--AAT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1832 17 +      5583 CACTC----T-------AAATTGTTACA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190727 17 +    199430 TGCTC----T-------AAGTTATTACA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104679 17 -    539355 TGCTC----T-------AAGTTATTACA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6013 17 +      6850 TGCTT----T-------AAATTATTACA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6064 17 +     20590 TGCTT----T-------AAATTATTACA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352277 17 - 186847797 TGCtc----t-------aaattattata
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18936 17 -     31044 TGCTC----T-------CGATTATTACG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479307  9 -    610378 -----------------AACTGG--AAT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19939 17 +     26378 TGCTC----T-------AACTTATTATA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32617 17 -     78344 TGCTC----T-------AACTTATTATA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19264 17 +     25722 TGCTC----T-------AACTTATTATA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27569 17 -     62838 TGCTC----T-------AACTTATTATA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27615 17 +     46913 TGCTC----T-------AACTTATTATA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8424 17 -     28527 TGCTC----T-------AACTTATTATA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29506 17 -     64340 TGCTC----T-------AACTTATTATA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27543 17 -     63452 TGCTC----T-------AACTTATTATA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     8988 17 +     22490 TGCTC----T-------AACTTATTATA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2414 17 -      6147 TGCTC----T-------AACTTATTATA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9319 17 -     13050 TGCTC----T-------AACTTATTATA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254559 17 -   6242583 TGCTC----T-------AACTTATTATA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         583 17 +     19340 TGCTC----T-------AACTTATTATA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172609 17 -    200418 TGCTC----T-------CAATGCTTATG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479577 17 -  10818551 TGCTC----C-------AAATCGTTACA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832956 17 -   4065304 TGATC----T-------AAATTATTACA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7224 17 -     70247 TAATC----T-------AGATTATTACA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360383 17 -  33153633 TGCTC----T-------CAATTATTACG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2838 14 -     21056 --CCT----T-------AAATC-CTACA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180974 17 +   5085361 TGTTC----T-------AAATTATTTCA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24365 17 -     30710 TGATC----T-------ACATTATTGCA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23272 17 -    147434 TGATC----T-------ACATTATTGCA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75458 17 +   5488506 TGCTC----T-------CAATTATTGCA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104116 17 -    112863 TGCTC----T-------AAATTATTTCA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173305 17 -    224448 TGCTT----T-------AAGTTATTACA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28012 17 -     86975 TGTTC----T-------AAATTATTTCA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       308 17 -       753 TTATT----T-------AAAATATTATG
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595              20 17 +      1812 TGCTC----T-------CAATTATTACA
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4627  5 +     36723 TT---------A-AA
s Acinonyx_jubatus.LLWD01001279.1                           811956  4 +   1699592 t----------t-ga
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24276  3 +     63021 GT---------A---
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414485  4 +  29979442 C----------T-AA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214798  4 +    347723 c----------t-aa
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17217  5 -     61208 CT---------G-AA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46943  5 +     53615 TT---------A-AA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42904  5 +     44087 TT---------A-AA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15529  5 -     21945 TT---------A-AA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17212  5 +     32033 TT---------A-AA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71383  5 -     84148 GT---------A-AA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43622  5 -     78289 GT---------A-AA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43061  5 +     55831 GT---------A-AA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41511  5 -     64179 GT---------A-AA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23146  4 -     24835 -T---------A-AA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40136  5 +     45454 GT---------A-AA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45782  5 +     70886 GT---------A-AA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7958  5 +     30854 GT---------A-AA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32094  5 +     42133 GT---------A-AA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584481  4 +   2318259 T----------T-AA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176273  4 -    412891 A----------A-AA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49578  4 -     68529 T----------T-AA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     337  5 +     17741 GT---------A-AA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              962  5 -     15923 GT---------A-AA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1237  5 -     16391 GT---------A-AA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                797  5 -     17186 GT---------A-AA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15181  4 -     32367 TT---------A-A-
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18719  5 -     45910 GG---------A-AA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4553  4 -     15198 A----------A-AA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273846  5 +  21539123 GT---------A-AA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10013  5 +     48076 GT---------A-AA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5150  5 -     28759 GT---------A-AA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32703  5 +     44353 GT---------A-AA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48073  5 -     71267 GT---------A-AA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22132  5 -     33135 GT---------A-AA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5322  5 +     11645 TG---------A-AA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5328  5 -     19611 TG---------A-AA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956154  4 -  23207421 T----------T-AA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3363  4 -      4711 T----------T-AA
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85472  4 +    124022 T----------T-AA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21004  4 +    288883 T----------T-AA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355390  4 +  48749331 T----------T-AA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753958  4 +   1948126 T----------T-AA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544097  4 -  45695690 T----------T-AA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529122  4 -   4408762 T----------T-AA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7019  5 +     28062 GT---------A-AA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42313  5 -     91139 GT---------A-AA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19839  5 +     95584 GT---------A-AA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19752  5 +    119600 GT---------A-AA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9319  5 +     18648 GT---------A-AA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8858  5 -     13885 GT---------A-AA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             924  5 -      8861 GT---------A-AA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453317  5 + 189096842 GT---------A-AA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                839  5 +      8664 GT---------A-AA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630141  2 +  17673402 C----------T---
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664427  2 +   7040546 C----------T---
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208087  2 +   1652518 C----------T---
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504502  4 +  60362399 T----------T-AA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8138  4 -     23171 T----------T-AA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221481  4 +   9314153 t----------t-aa
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614616  4 +  59632846 t----------t-aa
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106197  4 -  63665305 t----------t-aa
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408193  4 -  46296322 T----------T-AA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590466  4 +  44709034 T----------T-AA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    655  5 -      1880 TC---------A-AA
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269406  5 +    496798 tt---------a-aa
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                488  4 -      1021 A----------A-AA
i Carollia_perspicillata.CarPer_scaffold_668536          I 9 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26820  4 -     39886 TT---------A-A-
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78438  4 -    217609 T----------T-AA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995534  5 +  23392119 tt---------a-aa
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998976  5 +  23407841 TT---------A-AA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62057  5 -     66877 TT---------A-AA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4237  5 -     12580 GT---------A-AA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42295  5 +     53515 GT---------A-AA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370226  5 -  26074798 GT---------A-AA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7115  5 -     34880 GT---------A-AA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66210  5 -     89041 GT---------A-AA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1335  5 -      5494 TT---------A-AA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491292  5 -  27778364 t----------taaa
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18125  5 +     27315 T----------TAAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140126  5 -   4669795 tt---------a-aa
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43868  5 +     47900 TT---------A-AA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43693  5 -     44860 TT---------A-AA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43681  5 -    148725 TT---------A-AA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25898  5 -     40656 TT---------A-AA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5864  5 +     20796 TT---------A-AA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10941  5 -     17524 TT---------A-AA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26663  5 -     34525 TT---------A-AA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10484  5 -     25376 TT---------A-AA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363080  5 -  39242232 TT---------A-AA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268796  5 +  21565898 TT---------A-AA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31130  5 -     45857 TT---------A-AA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26069  5 -     32606 TT---------A-AA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2228  5 +      8499 TT---------A-AA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24626  5 +     70610 TT---------A-AA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21555  5 +     36323 TT---------A-AA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11921  5 -     19938 TT---------A-AA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29739  5 -     33796 TG---------A-AA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4256  5 -     15404 TG---------A-AA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8117  5 -     32913 GT---------A-AA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18530  5 -     40346 GT---------A-AA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18785  5 +    216457 GT---------A-AA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18578  5 +     39636 GT---------A-AA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237984  5 -   2543920 tt---------a-aa
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3167  5 +      5346 GT---------A-AA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41650  5 -    112038 GT---------A-AG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7221  5 +     34062 GT---------A-AG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342446  5 +  18827391 TT---------A-AA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8993  5 -     44032 TT---------A-AA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303770  5 - 135778131 tt---------a-aa
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13890  5 +     15858 TT---------A-AA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605466  5 -    839153 TT---------A-AA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408208  5 -   2368649 tt---------a-aa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378083  5 - 200372422 TT---------A-AA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1632  5 -     84244 TT---------A-AA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806308  5 +  53390261 T---------TA-AA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1896  4 -      8242 A----------A-CA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43446  5 -     83289 AT---------T-AA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113853  5 - 224834208 tt---------a-ac
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6567  4 +     12657 T----------A-AA
i Crocidura_indochinensis.CroInd_scaffold_77846          I 390 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3408  4 +     87169 T----------T-GA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644121  5 -   1526836 TT---------A-CA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16974  5 +     50838 TT---------A-AA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3418  5 +     36344 TT---------A-AA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27217  5 +     75252 TT---------A-AA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109265  5 -   2246927 tt---------a-aa
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291668  5 +  12879189 TG---------A-AA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624483  4 -  35494412 T----------T-AA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864296  4 -  20541912 G----------A-AA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663581  5 -   1390856 t----------taaa
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138369  5 -    198055 T----------TAAA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97974  5 -    115145 TT---------A-AA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949596  4 -  37912305 TT---------A-A-
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4531  4 -     10735 TT---------A-A-
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9478  5 +     14636 TT---------A-AA
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853839  5 - 111700974 TT---------A-AG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5359  4 +     19438 a----------a-ta
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238850  4 -    607251 T----------T-AA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107660  5 -  10337057 TT---------G-AA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30132  5 +    110024 tt---------a-ac
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12119  5 +     18970 tt---------a-ac
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915220  4 +  41312741 c----------t-AA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577927  4 +  14770903 A----------A-AA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040454  5 -   4378816 t----------taaa
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374378  5 +  39960074 t----------taaa
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411164  5 -    498745 t----------taaa
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665222  4 +   7059049 t----------c-aa
i Erinaceus_europaeus.JH835339.1                         I 285 C 0
s Erythrocebus_patas.Contig38                               261973  5 +  21539334 TT---------A-AA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64033  4 -    133382 T----------T-AA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4250  4 +      7672 T----------T-AA
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13865  5 -     24895 TG---------A-AG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41574  5 -     70999 TG---------A-AG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85536  5 +    112731 TG---------A-AG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42105  5 +     68309 TG---------A-AG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52431  5 -     65740 TG---------A-AG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23060  5 -     75513 TG---------A-AG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47257  5 -     97555 TG---------A-AG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3982  5 +     30972 TG---------A-AG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41702  5 -     52037 TG---------A-AG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58104  5 -    111500 TG---------A-AG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245865  4 - 206538554 t----------t-ga
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115651  4 - 205367284 t----------t-ga
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26752  4 -     30238 T----------T-GA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124133  5 -    137831 tg---------a-aa
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7678  5 +     22493 tg---------a-aa
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19735 14 -     32986 tgtagactatta-aa
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 265  5 -     28519 TT---------A-CA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90542  4 -     95226 T----------T-AA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33390  4 -     36801 TT---------A-A-
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4929  5 -      8343 TT---------A-AA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253941  5 - 186649187 TT---------A-AA
i Gorilla_gorilla.LT578341.1                             I 17 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     883  5 -     78134 TT---------A-AA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13790  5 -     40692 TG---------A-AA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35192  5 +     49394 TG---------A-AA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60060  5 -     66874 TG---------A-AA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8934  5 -     42923 TG---------A-AA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15934  5 -     53142 TG---------A-AA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29896  4 -    327341 C----------C-GA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8300  4 +     48891 T----------T-AA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6055  3 +      6687 -----------A-AA
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6743  4 -     36432 T----------T-AA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49887  4 +     49977 A----------A-CA
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141949  5 -    630532 TT---------A-AA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68813  4 +     83186 T----------T-AA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70939  5 +    143317 TT---------A-AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4984  5 +     12352 TT---------A-AA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12168  5 +     55766 TT---------A-AA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051766  5 + 191637585 TT---------A-AA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800644  5 +  11177569 TT---------A-AA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3591  5 -    135385 TT---------A-AA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385963  4 +   7955117 TT---------A-A-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1444  5 +     11955 TG---------A-AA
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2270  4 -     16823 T----------T-AA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238776 10 +   9596543 gg---cct-gga-aa
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64749  4 -     97402 T----------T-AA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42389  5 +    110728 GT---------A-AA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61787  4 -     65777 A----------A-AA
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758583  5 +  30322482 TG---------A-AA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3303  5 -     13097 GT---------A-AA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3057  5 +      5940 GT---------A-AA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2887  5 -      5717 GT---------A-AA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9263  4 -     11567 -T---------A-AA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10644  4 -     12945 -T---------A-AA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8112  5 +     29618 TG---------A-AA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8108  5 +     31569 TG---------A-AA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8118  5 +     24756 TG---------A-AA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8118  5 +     16388 TG---------A-AA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812635  4 -   3914936 C----------T-AA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16959  5 +     24238 TC---------A-AA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333790  4 +    662738 T----------T-AA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333011  5 -   1826925 TG---------A-AA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9696  5 +     19643 TG---------A-AA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043353  5 -   6120653 TG---------A-AA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080134  5 +  43346337 tt---------a-aa
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613771  4 +  59628241 t----------t-aa
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44395  5 -     61512 TT---------A-AA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372057  5 -  60120075 TT---------A-AA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24320  5 +     30207 TT---------A-AA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21423  5 -     24934 TT---------A-AA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24273  5 +     30527 TT---------A-AA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35449  5 -     50087 TT---------A-AA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45193  5 +     51645 TT---------A-AA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414396  5 - 187317192 tt---------a-aa
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398626  5 +  25927173 tt---------a-aa
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47798  5 -     62418 TT---------A-AA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  336  5 +     14901 TT---------A-AA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44270  5 +     59329 TT---------A-AA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270178  5 +    668171 TT---------A-AA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  454  5 +      1732 TT---------A-AA
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1976  5 +     17132 TT---------A-AA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222323  4 -    270270 A----------A-CA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321475  5 +  24302211 TT---------A-AA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356307  5 -    752769 TT---------A-AA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672656  5 -    737560 T----------TGAA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219940  5 +    317179 T----------TGAA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500183  4 +  40650429 TT---------A-A-
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149484  4 +    207569 A----------A-GA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25324  4 -     74585 C----------T-AA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49273  3 -    140813 TT---------A---
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428363  5 +  29670104 tt---------a-ac
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80334  4 +     93471 T----------T-AA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9428  5 +     17804 GT---------A-AA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9930  5 -     12984 GT---------A-AA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18244  5 -     26561 GT---------A-AA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983721  5 +  93316391 TG---------A-AA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44890  5 +    145209 TT---------A-AG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184242  1 +    200668 --------------A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961580  5 +  27267610 tt---------a-ac
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362344  4 -   8254450 a----------a-aa
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41245  4 -     48117 A----------A-AA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21483  5 -     27822 TT---------A-AA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7642  4 +     27589 C----------T-AA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51510  5 -     62432 TG---------A-AA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352226  4 +    437263 T----------T-AA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178406  4 +    366855 A----------A-AA
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24661  4 -     82753 T----------T-AA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17648  4 -     63510 C----------C-GA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38285  4 +     47283 A----------A-AA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592314  3 + 120012414 tt---------a---
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686699  3 + 129401213 tt---------a---
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216556  3 +  89631738 tT---------A---
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495995  3 + 130317789 tt---------a---
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81993  5 -     86153 TT---------T-AA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354253  4 +  14710649 c----------t-aa
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792535  4 +  10118263 a----------a-aa
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386695  4 +   6019432 a----------a-aa
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382514  4 +   4330536 a----------a-aa
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1342  4 +     18357 A----------A-AA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118733  5 +    130748 TT---------A-AA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 126
s Nannospalax_galili.KL204047.1                             945346  5 +   3037898 tt---------a-ac
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28134  5 +     34575 TT---------A-AA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468237  4 -  31847680 c----------t-aa
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226395  4 -   7148211 T----------T-AA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127352  4 -    149072 a----------a-aa
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52876  5 -    132029 TT---------A-AA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8971  5 -     16345 TT---------A-AA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14856  5 +     22201 TT---------A-AA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413077  5 -  22158432 TT---------A-AA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25254  5 -     54323 TT---------A-AA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197364  4 +   9404916 t----------t-aa
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635724  5 + 196305487 TG---------A-AA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2482  5 -      3937 TG---------A-AA
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563989  5 - 199412804 TG---------A-AA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550325  5 -   3988456 TA---------G-AA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053787  5 -  11899542 tt---------a-aa
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450834  4 +   2017862 c----------t-aa
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435426  4 -    630418 T----------T-AA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13426  4 +    150152 T----------T-AA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91915  5 -    140218 TT---------A-AC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2815  2 -     41509 AT-------------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095665  4 +  10937097 t----------t-aa
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12773  5 -     14239 TT---------A-AA
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102795  5 - 174332312 TC---------A-AA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38411  4 +    559221 t----------t-ag
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39293  5 -     51505 tg---------a-aa
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352296  5 +   1103335 TG---------A-AA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403420  4 -  44047080 T----------T-AA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3939  4 +     17875 T----------T-AA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             11553  7 -     26668 ttta-------a-aa
i Pan_troglodytes.NBAG03003091.1                         I 94 I 8
s Panthera_onca.PanOnc_flattened_line_3271                   23577  4 -    230217 T----------T-GA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460903  4 -  18783137 t----------t-ga
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971623  4 +   8748460 t----------t-ga
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614858  4 +   2937107 t----------t-aa
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242308  5 - 183742232 tt---------a-aa
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8770  5 +     21308 TT---------A-AA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291344  5 -  20919399 TT---------A-AA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21418  5 -     27687 TT---------A-AA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14564  5 +     16796 TT---------A-AA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21375  5 -     23640 TT---------A-AA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14231  4 +     78924 T----------T-GA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25506  5 +     31479 TG---------A-AA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17875  5 -     24908 TG---------A-AA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         928  4 +      9367 TT---------A-A-
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246011  2 +  18517816 at-------------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11520  4 -     15039 T----------T-AA
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1582  5 +     55023 TT---------A-AA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1132  5 -     89929 TT---------A-AA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1721  5 +     40849 TT---------A-AA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253385  5 +  14605196 tt---------a-aa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2868  3 +     22231 A----------A-A-
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64026  5 +    207309 GT---------A-AA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5119  5 -     25401 GT---------A-AA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30862  5 +     58159 GT---------A-AA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31138  5 +     63561 GT---------A-AA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30898  5 +     51148 GT---------A-AA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555868  5 -   4542175 GT---------A-AA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30882  5 +     51125 GT---------A-AA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3607  4 -      8168 T----------T-AA
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7285  5 +     39866 GT---------A-AA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2369  5 -      9282 GT---------A-AA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41773  5 -     87950 GT---------A-AA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42167  5 -     88961 GT---------A-AA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6865  5 -     39403 GT---------A-AA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41816  5 +     87928 GT---------A-AA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6862  5 -     60166 GT---------A-AA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13799  5 -     67232 GT---------A-AA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41715  5 -     90634 GT---------A-AA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43182  5 +     89403 GT---------A-AA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177094  5 - 189387572 TT---------A-AA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191911  5 -   9816681 TT---------A-AA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26717  5 +     69807 TT---------A-AA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43913  5 -     80239 TT---------A-AA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2441  3 +      3019 -----------A-GA
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981738  5 +   4620579 TG---------A-AA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565206  5 -   2598838 TG---------A-AA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2842  5 -      7103 TG---------A-AA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3439  5 -     11706 TG---------A-AA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7175  5 -     30655 TG---------A-AA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33500  5 +     46564 TG---------A-AA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93771  5 -     98465 TG---------A-AA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7408  5 +     35169 TG---------A-AA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36614  3 +     52041 tt---------a---
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51289  4 -     66298 a----------a-aa
i Pteronotus_parnellii.KE847780.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3823  4 -     18639 C----------T-AA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840009  4 -  28871421 a----------a-ca
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536518  4 -   4952924 a----------a-ca
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098217  4 +  38429054 t----------t-ga
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26091  5 +     91421 TT---------A-AA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152583  5 -   7812017 TT---------A-AA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6958  5 +     72585 TT---------A-AA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52345  4 +     55069 T----------T-AA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021912  3 -  90668790 TT---------A---
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913905  4 +   3329780 a----------a-ca
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              663  5 +      7119 TT---------A-AA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121271  5 + 195417433 tt---------a-aa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235513  5 -   7961872 TT---------A-AA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73917  4 -    116970 A----------A-CA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3165  5 +     27962 GT---------A-AA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3060  5 +      6077 GT---------A-AA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3151  5 +      5971 GT---------A-AA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3073  5 +      5932 GT---------A-AA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1415  5 -      4390 GT---------A-AA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390850  5 - 209938924 GT---------A-AA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3022  5 +      5979 GT---------A-AA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3784  5 -      4301 GT---------A-AA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7012  4 +     16473 T----------T-AA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108187  5 + 121099817 gt---------a-aa
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29754  5 -     47369 GT---------A-AA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30140  5 -     79414 GT---------A-AA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26831  5 -     34454 GT---------A-AA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14234  5 -     22428 GT---------A-AA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29386  5 -     47109 GT---------A-AA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237444  5 +   5703754 GT---------A-AA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7034  5 +     21866 GT---------A-AA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115102  5 +    313613 T---------TA-AA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24410  5 +     27374 TT---------A-AA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27924  5 +     58920 TT---------A-AA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14420  5 -     45317 TT---------A-AA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22079  5 -     42441 TT---------A-AA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24757  5 -     29113 TT---------A-AA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27831  5 -     48123 TT---------A-AA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48387  5 +     77746 TT---------A-AT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857449  4 -   1910179 T----------C-AA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670475  4 +  18376816 t----------a-aa
i Sorex_araneus.JH798187.1                               I 397 C 0
s Spermophilus_dauricus.KZ294078.1                         1867543  4 +   3870691 TT---------A-A-
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5813  4 -     97271 C----------T-AA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124052  4 +    196729 C----------C-GA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390338  5 +   1523678 TT---------A-AA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13272  4 +     22964 A----------A-AA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1849  4 +      5583 TT---------A-A-
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190744  5 +    199430 T----------TAAA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104696  5 -    539355 T----------TAAA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6030  5 +      6850 TT---------A-AA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6081  5 +     20590 TT---------A-AA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352294  5 - 186847797 tt---------a-aa
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18953  5 -     31044 TT---------A-AA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479316  4 -    610378 A----------A-AA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19956  5 +     26378 TT---------A-AA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32634  5 -     78344 TT---------A-AA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19281  5 +     25722 TT---------A-AA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27586  5 -     62838 TT---------A-AA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27632  5 +     46913 TT---------A-AA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8441  5 -     28527 TT---------A-AA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29523  5 -     64340 TT---------A-AA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27560  5 -     63452 TT---------A-AA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9005  5 +     22490 TT---------A-AA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2431  5 -      6147 TT---------A-AC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9336  5 -     13050 TT---------A-AA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254576  5 -   6242583 TT---------A-AA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         600  5 +     19340 TT---------A-AA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172626  4 -    200418 T----------G-AA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479594  5 -  10818551 TC---------A-AA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832973  4 -   4065304 TT---------A-A-
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7241  4 -     70247 TT---------A-A-
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360400  4 -  33153633 T----------T-AA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2852  5 -     21056 T---------TA-AA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180991  4 +   5085361 C----------T-AA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24382  5 -     30710 TG---------A-AA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23289  5 -    147434 TG---------A-AA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75475  2 +   5488506 C----------T---
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104133  4 -    112863 T----------T-AA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173322  4 -    224448 TT---------A-A-
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28029  4 -     86975 C----------T-AA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       325  5 -       753 CT---------A-AT
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595              37  4 +      1812 T----------T-AA
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4632 4 +     36723 AA--TT
s Acinonyx_jubatus.LLWD01001279.1                           811960 4 +   1699592 aa--tc
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24279 3 +     63021 -A--CC
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414489 4 +  29979442 GAT--T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214802 3 +    347723 aa---t
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allactaga_bullata.AllBul_scaffold_20030                    17222 4 -     61208 AA--CT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46948 4 +     53615 AA--TT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42909 4 +     44087 AA--TT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15534 4 -     21945 AA--TT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17217 4 +     32033 AA--TT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71388 4 -     84148 GA--TT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43627 4 -     78289 GA--TT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43066 4 +     55831 GA--TT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41516 4 -     64179 GA--TT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23150 4 -     24835 GA--TT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40141 4 +     45454 GA--TT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45787 4 +     70886 GA--TT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7963 4 +     30854 GA--TT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32099 4 +     42133 GA--TT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584485 4 +   2318259 AA--TT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176277 4 -    412891 AA--TA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49582 4 -     68529 AA--TT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     342 4 +     17741 AA--TT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              967 4 -     15923 AA--TT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1242 4 -     16391 GA--TT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                802 4 -     17186 GA--TT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15185 4 -     32367 AA--TT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18724 4 -     45910 GT--TT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4557 4 -     15198 CA--TA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273851 4 +  21539123 AA--TT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10018 4 +     48076 AA--TT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5155 4 -     28759 AA--TT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32708 4 +     44353 AA--TT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48078 4 -     71267 AA--TT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22137 4 -     33135 AA--TT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5327 4 +     11645 AA--TT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5333 4 -     19611 AA--TT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956158 4 -  23207421 AA--TT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3367 4 -      4711 AA--TT
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85476 4 +    124022 AA--TT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21008 4 +    288883 AA--TT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355394 4 +  48749331 AA--TT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753962 4 +   1948126 AA--TT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544101 4 -  45695690 AA--TT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529126 4 -   4408762 AA--TT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7024 4 +     28062 AA--TT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42318 4 -     91139 AA--TT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19844 4 +     95584 AA--TT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19757 4 +    119600 AA--TT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9324 4 +     18648 AA--TT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8863 4 -     13885 AA--TT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             929 4 -      8861 AA--TT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453322 4 + 189096842 AA--TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                844 4 +      8664 AA--TT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630143 3 +  17673402 -G--TT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664429 3 +   7040546 -G--TT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208089 3 +   1652518 -G--TT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504506 3 +  60362399 AA---C
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8142 3 -     23171 AA---C
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221485 3 +   9314153 aa---c
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614620 3 +  59632846 aa---c
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106201 3 -  63665305 aa---c
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408197 4 -  46296322 AA--TT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590470 4 +  44709034 AA--TT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    660 4 -      1880 AT--TT
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269411 4 +    496798 aa--tt
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                492 4 -      1021 CA--TA
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26824 3 -     39886 -A--TT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78442 4 -    217609 AA--TT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995539 4 +  23392119 at--tt
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998981 4 +  23407841 AT--TT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62062 4 -     66877 AT--TT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4242 4 -     12580 AA--TT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42300 4 +     53515 AA--TT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370231 4 -  26074798 AA--TT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7120 4 -     34880 AA--TT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66215 4 -     89041 AA--TT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1340 4 -      5494 AA--TT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491297 4 -  27778364 aa--tt
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18130 4 +     27315 AA--TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140131 4 -   4669795 aa--tt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43873 4 +     47900 AA--TT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43698 4 -     44860 AA--TT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43686 4 -    148725 AA--TT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25903 4 -     40656 AA--TT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5869 4 +     20796 AA--TT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10946 4 -     17524 AA--TT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26668 4 -     34525 AA--TT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10489 4 -     25376 AA--TT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363085 4 -  39242232 AA--TT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268801 4 +  21565898 AA--TT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31135 4 -     45857 AA--TT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26074 4 -     32606 AA--TT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2233 4 +      8499 AA--TT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24631 4 +     70610 AA--TT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21560 4 +     36323 AA--TT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11926 4 -     19938 AA--TT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29744 4 -     33796 AA--TT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4261 4 -     15404 AA--TT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8122 4 -     32913 AA--TT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18535 4 -     40346 AA--TT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18790 4 +    216457 AA--TT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18583 4 +     39636 AA--TT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237989 4 -   2543920 at--tt
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3172 4 +      5346 AA--TT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41655 4 -    112038 AA--TT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7226 4 +     34062 AA--TT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342451 4 +  18827391 AA--TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        8998 4 -     44032 AA--TT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303775 4 - 135778131 aa--tt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13895 4 +     15858 AA--TG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605471 4 -    839153 AA--TG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408213 4 -   2368649 aa--tt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378088 4 - 200372422 AA--TT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1637 4 -     84244 AA--TT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806313 4 +  53390261 AA--CT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1900 4 -      8242 AA--TT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43451 4 -     83289 TA--CC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113858 4 - 224834208 AA--TC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6571 4 +     12657 AG--TA
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3412 4 +     87169 AA--TT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644126 4 -   1526836 AA--TC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16979 4 +     50838 AT--TT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3423 4 +     36344 AT--TT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27222 4 +     75252 AT--TT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109270 4 -   2246927 aa--tt
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291673 4 +  12879189 AA--TT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624487 4 -  35494412 AA--TT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864300 4 -  20541912 AA--TA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663586 4 -   1390856 aa--tt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138374 4 -    198055 AA--TT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97979 4 -    115145 AT--TT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949600 4 -  37912305 CA--TT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4535 4 -     10735 CA--TT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9483 4 +     14636 AT--TT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853844 4 - 111700974 AT--TT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5363 4 +     19438 aa--tt
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238854 4 -    607251 AA--TT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107665 4 -  10337057 GT--TT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30137 4 +    110024 aa--tc
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12124 4 +     18970 aa--tc
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915224 3 +  41312741 AA---T
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                             12577931 4 +  14770903 AA--TA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040459 4 -   4378816 aa--tt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374383 4 +  39960074 aa--tt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411169 4 -    498745 aa--tt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665226 4 +   7059049 at--tt
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               261978 4 +  21539334 AA--TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64037 4 -    133382 AA--TT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4254 4 +      7672 AA--TT
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13870 4 -     24895 AA--TT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41579 4 -     70999 AA--TT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85541 4 +    112731 AA--TT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42110 4 +     68309 AA--TT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52436 4 -     65740 AA--TT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23065 4 -     75513 AA--TT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47262 4 -     97555 AA--TT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3987 4 +     30972 AA--CT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41707 4 -     52037 AA--TT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58109 4 -    111500 AA--TT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245869 4 - 206538554 aa--tt
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115655 4 - 205367284 aa--tt
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26756 4 -     30238 AA--TT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124138 4 -    137831 gg--tt
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7683 4 +     22493 gg--tt
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19749 4 -     32986 gg--TT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 270 4 -     28519 AA--TT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90546 4 -     95226 AA--TT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33394 4 -     36801 AA--TT
i Glis_glis.GliGli_scaffold_33859                        C 0 I 225
s Gorilla_beringei.k141_3358147                               4934 4 -      8343 AA--TT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253946 4 - 186649187 AA--TT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                     888 4 -     78134 AA--TT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 222
s Hapalemur_alaotrensis.k141_330369                          13795 4 -     40692 AA--TT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35197 4 +     49394 AA--TT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60065 4 -     66874 AA--TT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8939 4 -     42923 AA--TT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15939 4 -     53142 AA--TT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29900 4 -    327341 AA--TT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8304 4 +     48891 AA--TT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6058 4 +      6687 TT--TT
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6747 4 -     36432 AA--TT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49891 4 +     49977 AA--CT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141954 4 -    630532 AA--TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68817 4 +     83186 AG--TC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70944 4 +    143317 AT--TT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4989 4 +     12352 AA--TT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12173 4 +     55766 AA--TT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051771 4 + 191637585 AA--TT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800649 4 +  11177569 AA--TT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3596 3 -    135385 A---TT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385967 4 +   7955117 CA--TT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1449 4 +     11955 AA--TT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2274 4 -     16823 AA--TT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238786 3 +   9596543 g---at
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64753 4 -     97402 AA--TG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42394 4 +    110728 AA--TT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61791 4 -     65777 AA--TA
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758588 4 +  30322482 AA--TT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3308 4 -     13097 AA--TT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3062 4 +      5940 AA--TT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2892 4 -      5717 AA--AT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9267 4 -     11567 AA--TT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10648 4 -     12945 AA--TT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8117 4 +     29618 AA--TT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8113 4 +     31569 AA--TT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8123 4 +     24756 AA--TT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8123 4 +     16388 AA--TT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812639 3 -   3914936 AA---C
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16964 4 +     24238 AA--TT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333794 4 +    662738 AA--TT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333016 4 -   1826925 AA--TT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9701 4 +     19643 GG--TT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043358 4 -   6120653 GG--TT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080139 4 +  43346337 tt--tt
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613775 3 +  59628241 aa---c
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44400 4 -     61512 AA--TT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372062 4 -  60120075 AA--TT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24325 4 +     30207 AA--TT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21428 4 -     24934 AA--TT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24278 4 +     30527 AA--TT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35454 4 -     50087 AA--TT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45198 4 +     51645 AA--TT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414401 4 - 187317192 aa--tt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398631 4 +  25927173 aa--tt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47803 4 -     62418 AA--TT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  341 4 +     14901 AA--TT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44275 4 +     59329 AA--TT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270183 4 +    668171 AA--TT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  459 4 +      1732 AA--TT
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1981 4 +     17132 AA--TT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222327 4 -    270270 AA--TT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321480 4 +  24302211 AA--TT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356312 4 -    752769 AA--TT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672661 4 -    737560 AA--TA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219945 4 +    317179 AA--TA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500187 4 +  40650429 AA--TT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149488 4 +    207569 AA--TT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25328 3 -     74585 AA---T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 49276 5 -    140813 -ATATC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428368 4 +  29670104 aa--tC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80338 4 +     93471 AA--TT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9433 4 +     17804 AA--TT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9935 4 -     12984 AA--TT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18249 4 -     26561 AA--TT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983726 4 +  93316391 AA--TT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44895 4 +    145209 AT--TT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184243 4 +    200668 AA--TA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961585 4 +  27267610 aa--tc
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362348 4 -   8254450 aa--ta
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41249 4 -     48117 AA--TA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21488 4 -     27822 AA--TT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7646 3 +     27589 AA---T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51515 4 -     62432 AA--TT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352230 4 +    437263 AA--TT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178410 4 +    366855 AA--CA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24665 4 -     82753 AA--CT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17652 4 -     63510 AA--TT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38289 4 +     47283 AA--TA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592317 3 + 120012414 -A--TC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686702 3 + 129401213 -a--tc
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216559 3 +  89631738 -A--TC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39495998 3 + 130317789 -a--tc
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             81998 4 -     86153 AA--TT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 450
s Mustela_putorius.JH418006.1                             14354257 3 +  14710649 aa---t
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myotis_brandtii.KE162005.1                               9792539 4 +  10118263 aa--ta
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386699 4 +   6019432 aa--ta
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382518 4 +   4330536 aa--ta
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1346 4 +     18357 AA--TA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118864 4 +    130748 aa--TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 126 C 0
s Nannospalax_galili.KL204047.1                             945351 4 +   3037898 AA--TT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28139 4 +     34575 AA--TT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468241 3 -  31847680 aa---t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226399 4 -   7148211 AA--TT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127356 4 -    149072 aa--ta
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52881 4 -    132029 AA--TT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8976 4 -     16345 AA--TT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14861 4 +     22201 AA--TT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413082 4 -  22158432 AA--TT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25259 4 -     54323 AA--TT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197368 3 +   9404916 aa---c
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635729 4 + 196305487 GG--TT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2487 4 -      3937 GG--TT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563994 4 - 199412804 GG--TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550330 4 -   3988456 AA--TT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053792 4 -  11899542 at--tt
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450838 3 +   2017862 aa---t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435430 4 -    630418 AA--TT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13430 4 +    150152 AA--TT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91920 4 -    140218 AA--TC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2817 4 -     41509 AA--TC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095669 4 +  10937097 aa--tt
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12778 4 -     14239 CA--TT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102800 4 - 174332312 AA--TT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38415 3 +    559221 aa---c
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39298 4 -     51505 gg--tt
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352301 4 +   1103335 GG--TT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403424 4 -  44047080 AA--TT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3943 4 +     17875 AA--TT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471975 4 - 189151597 AA--TT
i Pan_troglodytes.CM009242.2                             I 5 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23581 4 -    230217 AA--TT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460907 4 -  18783137 aa--tt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971627 1 +   8748460 a-----
i Panthera_tigris.KE722367.1                             C 0 I 8
s Pantholops_hodgsonii.KE114653.1                          1614862 4 +   2937107 aa--tt
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242313 4 - 183742232 aa--tt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8775 4 +     21308 AA--TT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291349 4 -  20919399 AA--TT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21423 4 -     27687 AA--TT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14569 4 +     16796 AA--TT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21380 4 -     23640 AA--TT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14235 4 +     78924 AA--TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25511 4 +     31479 GG--TT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17880 4 -     24908 GG--TT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         932 4 +      9367 CT--CT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246013 4 +  18517816 AA--TC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11524 4 -     15039 AA--TT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1587 4 +     55023 AA--TT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1137 4 -     89929 AA--TT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1726 4 +     40849 AA--TT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253390 4 +  14605196 aa--tt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2871 4 +     22231 AA--TA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64031 4 +    207309 AA--TT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5124 4 -     25401 AA--TT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30867 4 +     58159 AA--TT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31143 4 +     63561 AA--TT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30903 4 +     51148 AA--TT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555873 4 -   4542175 AA--TT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30887 4 +     51125 AA--TT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3611 4 -      8168 AA--TT
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7290 4 +     39866 AA--TT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2374 4 -      9282 AA--TT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41778 4 -     87950 AA--TT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42172 4 -     88961 AA--TT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6870 4 -     39403 AA--TT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41821 4 +     87928 AA--TT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6867 4 -     60166 AA--TT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13804 4 -     67232 AA--TT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41720 4 -     90634 AA--TT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43187 4 +     89403 AA--TT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177099 4 - 189387572 AA--TT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191916 4 -   9816681 AA--TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26722 4 +     69807 AA--TA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43918 4 -     80239 AA--TT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2444 4 +      3019 TT--TT
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981743 4 +   4620579 AA--TT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565211 4 -   2598838 AA--TT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2847 4 -      7103 AA--TT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3444 4 -     11706 AA--TT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7180 4 -     30655 AA--TT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33505 4 +     46564 AA--TT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93776 4 -     98465 AA--TT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7413 4 +     35169 AA--TT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36617 5 +     52041 -atatC
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51293 4 -     66298 aa--ta
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3827 3 -     18639 AA---T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 1
s Pteropus_alecto.KB030862.1                               5840013 4 -  28871421 aa--tt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536522 4 -   4952924 aa--tt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098221 4 +  38429054 aa--tt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26096 4 +     91421 AA--TT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152588 4 -   7812017 AA--TT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6963 4 +     72585 AA--TT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52349 4 +     55069 AA--TT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021915 3 -  90668790 -G--TC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913909 4 +   3329780 aa--tt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              668 4 +      7119 AA--TT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121276 4 + 195417433 aa--tt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235518 4 -   7961872 AA--TT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73921 4 -    116970 AA--TT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3170 4 +     27962 AA--TT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3065 4 +      6077 AA--TT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3156 4 +      5971 AA--TT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3078 4 +      5932 AA--TT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1420 4 -      4390 AA--TT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390855 4 - 209938924 AA--TT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3027 4 +      5979 AA--TT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3789 4 -      4301 AA--TT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7016 4 +     16473 AA--TT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108192 4 + 121099817 aa--TT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29759 4 -     47369 AA--TT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30145 4 -     79414 AA--TT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26836 4 -     34454 AA--TT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14239 4 -     22428 AA--TT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29391 4 -     47109 AA--TT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237449 4 +   5703754 AA--TT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7039 4 +     21866 AA--TT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115107 4 +    313613 TA--TT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24415 4 +     27374 AA--TT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27929 4 +     58920 AA--TT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14425 4 -     45317 AA--TT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22084 4 -     42441 AA--TT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24762 4 -     29113 AA--TT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27836 4 -     48123 AA--TT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48392 4 +     77746 AG--TC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857453 4 -   1910179 AG--TT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670479 4 +  18376816 ag--tt
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867547 4 +   3870691 CA--TT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5817 3 -     97271 AA---T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629             124056 4 +    196729 AA--TT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390343 4 +   1523678 AA--TT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13276 4 +     22964 AA--TA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1853 4 +      5583 AA--TT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190749 4 +    199430 AA--TT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104701 4 -    539355 AA--TT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6035 4 +      6850 AA--TT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6086 4 +     20590 AA--TT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352299 4 - 186847797 aa--tt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18958 4 -     31044 TT--TT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479320 4 -    610378 AA--TA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19961 4 +     26378 AA--TT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32639 4 -     78344 AA--TT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19286 4 +     25722 AA--TT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27591 4 -     62838 AA--TT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27637 4 +     46913 AA--TT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8446 4 -     28527 AG--TT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29528 4 -     64340 AA--TT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27565 4 -     63452 AA--TT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9010 4 +     22490 AA--TT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2436 4 -      6147 AA--TT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9341 4 -     13050 AA--TT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254581 4 -   6242583 AA--TT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         605 4 +     19340 AA--TT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172630 4 -    200418 AA--TT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479599 4 -  10818551 TT--TT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832977 4 -   4065304 GA--TT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7245 4 -     70247 AA--TT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360404 4 -  33153633 AA--TT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2857 4 -     21056 AA--TT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180995 4 +   5085361 GAT--T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24387 4 -     30710 AA--TT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23294 4 -    147434 AA--TT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75477 3 +   5488506 -G--TT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104137 3 -    112863 AA---C
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173326 4 -    224448 AA--TT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28033 3 -     86975 AA---T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       330 4 -       753 GA--TT
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595              41 4 +      1812 AA--TT
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4636 3 +     36723 GAA
s Acinonyx_jubatus.LLWD01001279.1                           811964 3 +   1699592 GTT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24282 3 +     63021 ATC
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414493 3 +  29979442 GTT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214806 3 +    347723 ttt
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17226 3 -     61208 GCT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46952 3 +     53615 GAA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42913 3 +     44087 GAA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15538 3 -     21945 GAA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17221 3 +     32033 GAA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71392 3 -     84148 GGA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43631 3 -     78289 GGA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43070 3 +     55831 GGA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41520 3 -     64179 GGA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23154 3 -     24835 GGA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40145 3 +     45454 GGA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45791 3 +     70886 GGA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7967 3 +     30854 GGA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32103 3 +     42133 GGA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584489 3 +   2318259 GAT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176281 3 -    412891 GAT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49586 3 -     68529 GAT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     346 3 +     17741 GGA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              971 3 -     15923 GGA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1246 3 -     16391 GGA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                806 3 -     17186 GGA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15189 3 -     32367 GAG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18728 3 -     45910 GAC
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4561 3 -     15198 GAT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273855 3 +  21539123 GGA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10022 3 +     48076 GGA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5159 3 -     28759 GGA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32712 3 +     44353 GGA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48082 3 -     71267 GGA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22141 3 -     33135 GGA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5331 3 +     11645 GAT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5337 3 -     19611 GAT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956162 3 -  23207421 GAT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3371 3 -      4711 GAT
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85480 3 +    124022 GAT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21012 3 +    288883 GAT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355398 3 +  48749331 GAT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753966 3 +   1948126 GAT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544105 3 -  45695690 GAT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529130 3 -   4408762 GAT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7028 3 +     28062 GGA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42322 3 -     91139 GGA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19848 3 +     95584 GGA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19761 3 +    119600 GGA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9328 3 +     18648 AGA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8867 3 -     13885 GGA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             933 3 -      8861 GGA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453326 3 + 189096842 GGA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                848 3 +      8664 GGA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630146 3 +  17673402 GAT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664432 3 +   7040546 GAT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208092 3 +   1652518 GAT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504509 3 +  60362399 ATT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8145 3 -     23171 ATT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221488 3 +   9314153 att
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614623 3 +  59632846 att
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106204 3 -  63665305 att
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408201 3 -  46296322 GAT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590474 3 +  44709034 GAT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    664 3 -      1880 TAT
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269415 2 +    496798 ta-
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                496 3 -      1021 GAT
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26827 3 -     39886 GAC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78446 3 -    217609 GAT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995543 3 +  23392119 gat
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998985 3 +  23407841 GAT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62066 3 -     66877 GAT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4246 3 -     12580 GGA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42304 3 +     53515 GGA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370235 3 -  26074798 GGA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7124 3 -     34880 GGA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66219 3 -     89041 GGA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1344 2 -      5494 GA-
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491301 3 -  27778364 aat
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18134 3 +     27315 AAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140135 3 -   4669795 gaa
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43877 3 +     47900 GAA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43702 3 -     44860 GAA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43690 3 -    148725 GAA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25907 3 -     40656 GAA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5873 3 +     20796 GAA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10950 3 -     17524 GAA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26672 3 -     34525 GAA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10493 3 -     25376 GAA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363089 3 -  39242232 GAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268805 3 +  21565898 GAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31139 3 -     45857 GAA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26078 3 -     32606 GAA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2237 3 +      8499 GAA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24635 3 +     70610 GAA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21564 3 +     36323 GAA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11930 3 -     19938 GAT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29748 3 -     33796 GAT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4265 3 -     15404 GAT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8126 3 -     32913 GGA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18539 3 -     40346 GGA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18794 3 +    216457 GGA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18587 3 +     39636 GGA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237993 3 -   2543920 gat
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3176 3 +      5346 GGA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41659 3 -    112038 GGA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7230 3 +     34062 GGA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342455 3 +  18827391 GAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9002 3 -     44032 GAA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303779 3 - 135778131 gaa
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13899 3 +     15858 GTT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605475 3 -    839153 GTT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408217 3 -   2368649 gaa
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378092 3 - 200372422 GAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1641 3 -     84244 GAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806317 3 +  53390261 GAC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1904 3 -      8242 GAT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43455 3 -     83289 AAT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113862 3 - 224834208 AAA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6575 3 +     12657 GAT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3416 3 +     87169 GTT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644130 3 -   1526836 GAT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  16983 3 +     50838 aaa
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 464
s Cuniculus_paca.CunPac_flattened_line_7025                   3427 3 +     36344 GAT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27226 3 +     75252 GAT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109274 3 -   2246927 ggt
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291677 3 +  12879189 GAT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624491 3 -  35494412 GAT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864304 3 -  20541912 GAT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663590 3 -   1390856 aat
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138378 3 -    198055 AAT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97983 3 -    115145 GAT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949604 3 -  37912305 TAC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4539 3 -     10735 TAC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9487 3 +     14636 GAT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853848 3 - 111700974 TAT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5367 3 +     19438 gtt
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238858 3 -    607251 GAT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107669 3 -  10337057 TAT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30141 3 +    110024 aaa
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12128 3 +     18970 aaa
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915228 3 +  41312741 GCT
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                             12577935 3 +  14770903 GAC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040463 3 -   4378816 aac
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374387 3 +  39960074 aac
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411173 3 -    498745 aac
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665230 1 +   7059049 --t
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               261982 3 +  21539334 GAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64041 3 -    133382 GAT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4258 3 +      7672 GAT
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13874 3 -     24895 GAT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41583 3 -     70999 GAT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85545 3 +    112731 GAT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42114 3 +     68309 GAT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52440 3 -     65740 GAT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23069 3 -     75513 GAT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47266 3 -     97555 GAT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3991 3 +     30972 GAT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41711 3 -     52037 GAT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58113 3 -    111500 GAT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245873 3 - 206538554 gTT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115659 3 - 205367284 gTT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26760 3 -     30238 GTT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124142 3 -    137831 gac
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7687 3 +     22493 gac
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19753 3 -     32986 GAC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 274 3 -     28519 AAT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90550 3 -     95226 GAT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33623 3 -     36801 gat
i Glis_glis.GliGli_scaffold_33859                        I 225 C 0
s Gorilla_beringei.k141_3358147                               4938 3 -      8343 GAA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253950 3 - 186649187 GAA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1114 3 -     78134 gat
i Graphiurus_murinus.GraMur_scaffold_10447               I 222 C 0
s Hapalemur_alaotrensis.k141_330369                          13799 3 -     40692 GAT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35201 3 +     49394 GAT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60069 3 -     66874 GAT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8943 3 -     42923 GAT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15943 3 -     53142 GAT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29904 3 -    327341 GTT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8308 3 +     48891 GAT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6062 3 +      6687 TGC
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6751 3 -     36432 GGT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49895 3 +     49977 TAT
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141958 3 -    630532 GAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68821 3 +     83186 GTT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70948 3 +    143317 GAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4993 3 +     12352 GAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12177 3 +     55766 GAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051775 3 + 191637585 GAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800653 3 +  11177569 GAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3599 3 -    135385 GAG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385971 3 +   7955117 GAT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1453 3 +     11955 GAT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2278 3 -     16823 GAT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238789 3 +   9596543 ggt
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64757 3 -     97402 GAT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42398 3 +    110728 GGA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61795 3 -     65777 GAC
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758592 3 +  30322482 GAT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3312 3 -     13097 GGA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3066 3 +      5940 GGA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2896 3 -      5717 GGA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9271 3 -     11567 GGA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10652 3 -     12945 GGA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8121 3 +     29618 GAT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8117 3 +     31569 GAT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8127 3 +     24756 GAT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8127 3 +     16388 GAT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812642 3 -   3914936 GTT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16968 3 +     24238 GAT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333798 3 +    662738 GAT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333020 3 -   1826925 GAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9705 3 +     19643 GAC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043362 3 -   6120653 GAC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080143 3 +  43346337 tat
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613778 3 +  59628241 att
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44404 3 -     61512 GAA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372066 3 -  60120075 GAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24329 3 +     30207 GAA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21432 3 -     24934 GAA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24282 3 +     30527 GAA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35458 3 -     50087 GAA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45202 3 +     51645 GAA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414405 3 - 187317192 gaa
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398635 3 +  25927173 gaa
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47807 3 -     62418 GAA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  345 3 +     14901 GAA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44279 3 +     59329 GAA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270187 3 +    668171 GAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  463 3 +      1732 GAA
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1985 3 +     17132 GAA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222331 3 -    270270 GAT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321484 3 +  24302211 GAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356316 3 -    752769 GAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672665 3 -    737560 GAT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219949 3 +    317179 GAT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500191 3 +  40650429 GAT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149492 3 +    207569 AAT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25332 3 -     74585 GCT
i Mellivora_capensis.MelCap_flattened_line_19308         I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49281 3 -    140813 AAT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428372 3 +  29670104 AAA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80342 3 +     93471 GAT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9437 3 +     17804 GGA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9939 3 -     12984 GGA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18253 3 -     26561 GGA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983730 3 +  93316391 GAT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44899 3 +    145209 TAT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184247 3 +    200668 GAT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961589 3 +  27267610 AAA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362352 3 -   8254450 gat
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41253 3 -     48117 GAT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21492 3 -     27822 GAA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7649 3 +     27589 GTT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51519 3 -     62432 GAT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352234 3 +    437263 GAT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178414 3 +    366855 GAC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24669 3 -     82753 GAT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17656 3 -     63510 GTT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38293 3 +     47283 GAT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592320 3 + 120012414 AAT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686705 3 + 129401213 AAT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216562 3 +  89631738 AAT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39496001 3 + 130317789 AAT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82452 3 -     86153 gat
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 450 C 0
s Mustela_putorius.JH418006.1                             14354261 3 +  14710649 GCT
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myotis_brandtii.KE162005.1                               9792543 3 +  10118263 gat
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386703 3 +   6019432 gat
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382522 3 +   4330536 gat
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1350 3 +     18357 GAT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118868 3 +    130748 GAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945355 3 +   3037898 GAT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28143 3 +     34575 GAA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468244 3 -  31847680 gtt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226403 3 -   7148211 GAT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127360 3 -    149072 gat
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52885 3 -    132029 GAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8980 3 -     16345 GAA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14865 3 +     22201 GAA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413086 3 -  22158432 GAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25263 3 -     54323 GAA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197371 3 +   9404916 att
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635733 3 + 196305487 GAC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2491 3 -      3937 GAC
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93563998 3 - 199412804 GAC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550334 3 -   3988456 CTT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11053796 3 -  11899542 aaa
i Octodon_degus.JH651603.1                               C 0 I 461
s Odobenus_rosmarus.KB229312.1                             1450841 3 +   2017862 gtt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435434 3 -    630418 GAT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13434 3 +    150152 GAT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91924 3 -    140218 AAA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2821 3 -     41509 AAA
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095673 3 +  10937097 gaT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12782 3 -     14239 TAT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102804 3 - 174332312 GAT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38418 3 +    559221 att
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39302 3 -     51505 gac
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352305 3 +   1103335 GAC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403428 3 -  44047080 GAT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3947 3 +     17875 GAT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471979 3 - 189151597 GAA
i Pan_troglodytes.CM009242.2                             C 0 I 3
s Panthera_onca.PanOnc_flattened_line_3271                   23585 3 -    230217 GTT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460911 3 -  18783137 gtT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614866 3 +   2937107 aat
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242317 3 - 183742232 gaa
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8779 3 +     21308 GAA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291353 3 -  20919399 GAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21427 3 -     27687 GAA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14573 3 +     16796 GAA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21384 3 -     23640 GAA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14239 3 +     78924 GTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25515 3 +     31479 GAT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17884 3 -     24908 GAT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         936 3 +      9367 TAT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246017 3 +  18517816 AAA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11528 3 -     15039 GAT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1591 3 +     55023 GAA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1141 3 -     89929 GAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1730 3 +     40849 GAA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253394 3 +  14605196 gaa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2875 3 +     22231 GAC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64035 3 +    207309 GGA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5128 3 -     25401 GGA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30871 3 +     58159 GGA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31147 3 +     63561 GGA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30907 3 +     51148 GGA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555877 3 -   4542175 GGA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30891 3 +     51125 GGA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3615 3 -      8168 GAT
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7294 3 +     39866 GGA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2378 3 -      9282 GGA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41782 3 -     87950 GGA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42176 3 -     88961 GGA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6874 3 -     39403 GGA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41825 3 +     87928 GGA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6871 3 -     60166 GGA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13808 3 -     67232 GGA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41724 3 -     90634 GGA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43191 3 +     89403 GGA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177103 3 - 189387572 GAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191920 3 -   9816681 GAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26726 3 +     69807 GAA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43922 3 -     80239 GAA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2448 3 +      3019 TGC
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981747 3 +   4620579 GAT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565215 3 -   2598838 GAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2851 3 -      7103 GAT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3448 3 -     11706 GAT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7184 3 -     30655 GAT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33509 3 +     46564 GAT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93780 3 -     98465 GAT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7417 3 +     35169 GAT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36622 3 +     52041 AAT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51297 3 -     66298 gat
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3831 3 -     18639 GCT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 1 C 0
s Pteropus_alecto.KB030862.1                               5840017 3 -  28871421 gat
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536526 3 -   4952924 gat
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098225 3 +  38429054 gtT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26100 3 +     91421 GAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152592 3 -   7812017 GAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6967 3 +     72585 GAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52353 3 +     55069 TAT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021918 3 -  90668790 AAT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913913 3 +   3329780 gaT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              672 3 +      7119 GAA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121280 3 + 195417433 gaa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235522 3 -   7961872 GAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73925 3 -    116970 GAT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3174 3 +     27962 GGA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3069 3 +      6077 GGA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3160 3 +      5971 GGA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3082 3 +      5932 GGA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1424 3 -      4390 GGA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390859 3 - 209938924 GGA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3031 3 +      5979 GGA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3793 3 -      4301 GGA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7020 3 +     16473 GAT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108196 3 + 121099817 GGA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29763 3 -     47369 GGA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30149 3 -     79414 GGA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26840 3 -     34454 GGA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14243 3 -     22428 GGA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29395 3 -     47109 GGA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237453 3 +   5703754 GGA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7043 3 +     21866 GGA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115111 3 +    313613 GAT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24419 3 +     27374 GAA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27933 3 +     58920 GAA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14429 3 -     45317 GAA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22088 3 -     42441 GAA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24766 3 -     29113 GAA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27840 3 -     48123 GAA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48396 3 +     77746 AAA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857457 3 -   1910179 GAT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670483 3 +  18376816 cat
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867551 3 +   3870691 GAT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5821 3 -     97271 GTT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124060 3 +    196729 GTA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390347 3 +   1523678 GAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13280 3 +     22964 GAT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1857 3 +      5583 GAT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190753 3 +    199430 AAT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104705 3 -    539355 AAT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6039 2 +      6850 GA-
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6090 2 +     20590 GA-
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352303 3 - 186847797 gaa
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18962 3 -     31044 TAA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479324 3 -    610378 GAT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19965 3 +     26378 GAA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32643 3 -     78344 GAA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19290 3 +     25722 GAA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27595 3 -     62838 GAA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27641 3 +     46913 GAA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8450 3 -     28527 GAA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29532 3 -     64340 GAA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27569 3 -     63452 GAA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9014 3 +     22490 GAA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2440 3 -      6147 GAA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9345 3 -     13050 GAA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254585 3 -   6242583 GAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         609 3 +     19340 GAA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172634 3 -    200418 GAT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479603 3 -  10818551 TAC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832981 3 -   4065304 GAc
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7249 3 -     70247 GAC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360408 3 -  33153633 GAT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2861 3 -     21056 GAT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                180999 3 +   5085361 GTT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24391 3 -     30710 GAT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23298 3 -    147434 GAT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75480 3 +   5488506 GAT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104140 3 -    112863 ATT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173330 3 -    224448 GAC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28036 3 -     86975 GTT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       334 3 -       753 GAT
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595              45 3 +      1812 GAT
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Panthera_tigris.KE722367.1                               3971628 8 +   8748460 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4639 3 +     36723 G-TG
s Acinonyx_jubatus.LLWD01001279.1                           811967 3 +   1699592 T-GA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24285 1 +     63021 A---
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414496 3 +  29979442 T-TA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214809 3 +    347723 t-ta
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17229 3 -     61208 T-TA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46955 3 +     53615 G-TA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42916 3 +     44087 G-TA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15541 3 -     21945 G-TA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17224 3 +     32033 G-TA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71395 3 -     84148 T-TA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43634 3 -     78289 T-TA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43073 3 +     55831 T-TA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41523 3 -     64179 T-TA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23157 3 -     24835 T-TA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40148 3 +     45454 T-TA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45794 3 +     70886 T-TA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7970 3 +     30854 T-TA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32106 3 +     42133 T-TA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584492 3 +   2318259 T-TA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176284 3 -    412891 T-TA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49589 3 -     68529 T-TA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     349 3 +     17741 T-TA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              974 3 -     15923 T-TA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1249 3 -     16391 T-TA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                809 3 -     17186 T-TA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15192 3 -     32367 T-TA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18731 3 -     45910 T-AA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4564 3 -     15198 T-TA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273858 3 +  21539123 T-TA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10025 3 +     48076 T-TA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5162 3 -     28759 T-TA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32715 3 +     44353 T-TA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48085 3 -     71267 T-TA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22144 3 -     33135 T-TA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5334 3 +     11645 T-TA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5340 3 -     19611 T-TA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956165 3 -  23207421 T-TA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3374 3 -      4711 T-TA
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85483 3 +    124022 T-TA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21015 3 +    288883 T-TA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355401 3 +  48749331 T-TA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753969 3 +   1948126 T-TA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544108 3 -  45695690 T-TA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529133 3 -   4408762 T-TA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7031 3 +     28062 T-TA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42325 3 -     91139 T-TA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19851 3 +     95584 T-TA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19764 3 +    119600 T-TA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9331 3 +     18648 T-TA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8870 3 -     13885 T-TA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             936 3 -      8861 T-TA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453329 3 + 189096842 T-TA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                851 3 +      8664 T-TA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630149 3 +  17673402 T-TA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664435 3 +   7040546 T-TA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208095 3 +   1652518 T-TA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504512 3 +  60362399 T-TA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8148 3 -     23171 T-TA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221491 3 +   9314153 t-ta
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614626 3 +  59632846 t-ta
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106207 3 -  63665305 t-ta
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408204 3 -  46296322 T-TA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590477 3 +  44709034 T-TA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    667 3 -      1880 T-TA
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269417 3 +    496798 t-ta
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                499 3 -      1021 T-TA
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26830 3 -     39886 T-TA
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78449 3 -    217609 T-TT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995546 3 +  23392119 t-ta
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998988 3 +  23407841 T-TA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62069 3 -     66877 T-TA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4249 3 -     12580 T-TA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42307 3 +     53515 T-TA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370238 3 -  26074798 T-TA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7127 3 -     34880 T-TA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66222 3 -     89041 T-TA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1346 3 -      5494 T-TA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491304 3 -  27778364 t-ta
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18137 3 +     27315 T-TA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140138 3 -   4669795 g-TA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43880 3 +     47900 G-TA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43705 3 -     44860 G-TA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43693 3 -    148725 G-TA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25910 2 -     40656 G-T-
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5876 2 +     20796 G-T-
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10953 3 -     17524 G-TA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26675 3 -     34525 G-TA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10496 2 -     25376 G-T-
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363092 2 -  39242232 G-T-
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268808 2 +  21565898 G-T-
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31142 2 -     45857 G-T-
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26081 2 -     32606 G-T-
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2240 2 +      8499 G-T-
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24638 2 +     70610 G-T-
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21567 3 +     36323 G-TA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11933 3 -     19938 T-TA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29751 3 -     33796 T-TA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4268 3 -     15404 T-TA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8129 3 -     32913 T-TA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18542 3 -     40346 T-TA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18797 3 +    216457 T-TA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18590 3 +     39636 T-TA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237996 3 -   2543920 t-ta
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3179 3 +      5346 T-TA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41662 3 -    112038 T-TA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7233 3 +     34062 T-TA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342458 3 +  18827391 G-TA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9005 3 -     44032 G-TA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303782 3 - 135778131 g-TA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13902 3 +     15858 T-TA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605478 3 -    839153 T-TA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408220 3 -   2368649 g-TA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378095 3 - 200372422 G-TA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1644 3 -     84244 G-TA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806320 3 +  53390261 T-TC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1907 3 -      8242 T-TA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43458 3 -     83289 T-TT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113865 3 - 224834208 T-CT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6578 3 +     12657 T-TT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3419 3 +     87169 T-TA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644133 3 -   1526836 G-TA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17450 3 +     50838 T-TA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 464 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3430 3 +     36344 T-TA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27229 3 +     75252 T-TA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109277 3 -   2246927 T-TA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291680 3 +  12879189 T-TA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624494 3 -  35494412 T-TA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864307 3 -  20541912 T-TA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663593 3 -   1390856 t-ta
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138381 3 -    198055 T-TA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97986 3 -    115145 T-TA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949607 3 -  37912305 T-TA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4542 3 -     10735 T-TA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9490 3 +     14636 T-TA
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853851 3 - 111700974 T-TA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5370 3 +     19438 g-ta
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238861 3 -    607251 T-TA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107672 3 -  10337057 T-TA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30144 3 +    110024 t-tt
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12131 3 +     18970 t-tt
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915231 3 +  41312741 T-TA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577938 3 +  14770903 T-TA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040466 3 -   4378816 t-ta
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374390 3 +  39960074 t-ta
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411176 3 -    498745 t-ta
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665231 3 +   7059049 t-tc
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               261985 3 +  21539334 G-TA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64044 3 -    133382 T-TA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4261 3 +      7672 T-TA
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13877 3 -     24895 T-TA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41586 3 -     70999 T-TA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85548 3 +    112731 T-TA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42117 3 +     68309 T-TA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52443 3 -     65740 T-TA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23072 3 -     75513 T-TA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47269 3 -     97555 T-TA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3994 3 +     30972 T-TA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41714 3 -     52037 T-TA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58116 3 -    111500 T-TA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245876 3 - 206538554 T-TA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115662 3 - 205367284 T-TA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26763 3 -     30238 T-TA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124145 3 -    137831 t-aa
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7690 3 +     22493 t-aa
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19756 3 -     32986 T-AA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 277 3 -     28519 T-TA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90553 3 -     95226 T-TA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33626 3 -     36801 t-ta
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4941 3 -      8343 G-TA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253953 3 - 186649187 G-TA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1117 3 -     78134 t-ta
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13802 3 -     40692 T-TA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35204 3 +     49394 T-TA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60072 3 -     66874 T-TA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8946 3 -     42923 T-TA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15946 3 -     53142 T-TA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29907 3 -    327341 T-TA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8311 3 +     48891 T-TA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6065 3 +      6687 T-TA
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6754 3 -     36432 T-TA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49898 3 +     49977 T-TA
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141961 3 -    630532 G-TA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68824 3 +     83186 T-TC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70951 3 +    143317 T-TA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4996 3 +     12352 G-TA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12180 3 +     55766 G-TA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051778 3 + 191637585 G-TA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800656 3 +  11177569 G-TA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3602 3 -    135385 T-TA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385974 3 +   7955117 T-TC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1456 3 +     11955 T-TA
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2281 3 -     16823 T-TA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238792 3 +   9596543 t-ta
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64760 3 -     97402 T-TG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42401 3 +    110728 T-TA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61798 3 -     65777 T-TA
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758595 3 +  30322482 T-TA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3315 3 -     13097 T-TA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3069 3 +      5940 T-TA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2899 3 -      5717 T-TA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9274 3 -     11567 T-TA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10655 3 -     12945 T-TA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8124 3 +     29618 T-TA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8120 3 +     31569 T-TA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8130 3 +     24756 T-TA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8130 3 +     16388 T-TA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812645 3 -   3914936 T-TA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16971 3 +     24238 T-TA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333801 3 +    662738 T-CA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333023 3 -   1826925 G-TA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9708 3 +     19643 T-AA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043365 3 -   6120653 T-AA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080146 3 +  43346337 t-ta
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613781 3 +  59628241 t-ta
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44407 3 -     61512 G-TA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372069 3 -  60120075 G-TA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24332 3 +     30207 G-TA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21435 3 -     24934 G-TA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24285 3 +     30527 G-TA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35461 3 -     50087 G-TA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45205 3 +     51645 G-TA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414408 3 - 187317192 g-TA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398638 3 +  25927173 g-TA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47810 3 -     62418 G-TA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  348 3 +     14901 G-TA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44282 3 +     59329 G-TA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270190 3 +    668171 G-TA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  466 3 +      1732 G-TA
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1988 3 +     17132 G-TA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222334 3 -    270270 T-TA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321487 3 +  24302211 G-TA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356319 3 -    752769 G-TA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672668 3 -    737560 T-TA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219952 3 +    317179 T-TA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500194 3 +  40650429 T-TC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149495 3 +    207569 T-TA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25335 3 -     74585 T-TA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49284 3 -    140813 T-TC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428375 3 +  29670104 T-AT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80345 3 +     93471 T-TA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9440 3 +     17804 T-TA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9942 3 -     12984 T-TA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18256 3 -     26561 T-TA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983733 3 +  93316391 T-CA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44902 3 +    145209 T-TA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184250 3 +    200668 T-TA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961592 3 +  27267610 T-TT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362355 3 -   8254450 t-ta
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41256 3 -     48117 T-TA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21495 3 -     27822 G-TA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7652 3 +     27589 T-TA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51522 3 -     62432 T-TA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352237 3 +    437263 T-TA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178417 3 +    366855 T-TA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24672 3 -     82753 T-TA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17659 3 -     63510 T-TA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38296 3 +     47283 T-TA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592323 3 + 120012414 A-TT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686708 3 + 129401213 A-TT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216565 3 +  89631738 A-TT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39496004 3 + 130317789 A-TT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82455 3 -     86153 t-tA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354264 3 +  14710649 T-TA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792546 3 +  10118263 t-ta
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386706 3 +   6019432 t-ta
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382525 3 +   4330536 t-ta
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1353 3 +     18357 T-TA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118871 3 +    130748 T-TA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945358 3 +   3037898 T-TA
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28146 3 +     34575 G-TA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468247 3 -  31847680 t-ta
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226406 3 -   7148211 T-TA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127363 3 -    149072 a-ta
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52888 3 -    132029 G-TA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8983 3 -     16345 G-TA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14868 3 +     22201 G-TA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413089 3 -  22158432 G-TA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25266 3 -     54323 G-TA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197374 3 +   9404916 t-ta
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635736 3 + 196305487 T-AA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2494 3 -      3937 T-AA
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564001 3 - 199412804 T-AA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550337 3 -   3988456 T-TA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11054260 3 -  11899542 T-TA
i Octodon_degus.JH651603.1                               I 461 C 0
s Odobenus_rosmarus.KB229312.1                             1450844 3 +   2017862 t-ta
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435437 3 -    630418 T-TA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13437 3 +    150152 T-TA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91927 3 -    140218 T-TT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2824 3 -     41509 T-TT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095676 3 +  10937097 T-TA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12785 3 -     14239 T-TG
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102807 3 - 174332312 T-TA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38421 3 +    559221 t-ta
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39305 3 -     51505 t-aa
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352308 3 +   1103335 T-AA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403431 3 -  44047080 T-TA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3950 3 +     17875 T-TA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             11568 4 -     26668 gtta
i Pan_troglodytes.NBAG03003091.1                         I 8 I 8
s Panthera_onca.PanOnc_flattened_line_3271                   23588 3 -    230217 T-TA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460914 3 -  18783137 T-TA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614869 3 +   2937107 t-ta
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242320 3 - 183742232 g-TA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8782 3 +     21308 G-TA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291356 3 -  20919399 G-TA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21430 3 -     27687 G-TA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14576 3 +     16796 G-TA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21387 3 -     23640 G-TA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14242 3 +     78924 T-TA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25518 3 +     31479 T-AA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17887 3 -     24908 T-AA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         939 3 +      9367 T-TA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246020 3 +  18517816 T-TT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11531 3 -     15039 T-TA
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1594 3 +     55023 G-TA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1144 3 -     89929 G-TA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1733 3 +     40849 G-TA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253397 3 +  14605196 g-TA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2878 3 +     22231 T-TA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64038 3 +    207309 T-TA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5131 3 -     25401 T-TA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30874 3 +     58159 T-TA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31150 3 +     63561 T-TA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30910 3 +     51148 T-TA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555880 3 -   4542175 T-TA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30894 3 +     51125 T-TA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3618 3 -      8168 T-TA
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7297 3 +     39866 T-TA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2381 3 -      9282 T-TA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41785 3 -     87950 T-TA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42179 3 -     88961 T-TA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6877 3 -     39403 T-TA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41828 3 +     87928 T-TA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6874 3 -     60166 T-TA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13811 3 -     67232 T-TA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41727 3 -     90634 T-TA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43194 3 +     89403 T-TA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177106 3 - 189387572 G-TA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191923 3 -   9816681 G-TA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26729 3 +     69807 G-TC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43925 3 -     80239 G-AC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2451 3 +      3019 T-TA
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981750 3 +   4620579 T-TA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565218 3 -   2598838 T-TA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2854 3 -      7103 T-TA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3451 3 -     11706 T-TA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7187 3 -     30655 T-TA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33512 3 +     46564 T-TA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93783 3 -     98465 T-TA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7420 3 +     35169 T-TA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36625 3 +     52041 T-TC
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51300 3 -     66298 t-ta
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3834 3 -     18639 T-TA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840020 3 -  28871421 t-ta
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536529 3 -   4952924 t-ta
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098228 3 +  38429054 T-TA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26103 3 +     91421 G-TA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152595 3 -   7812017 G-TA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6970 3 +     72585 G-TA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52356 3 +     55069 T-TA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021921 3 -  90668790 A-AT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913916 3 +   3329780 T-TA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              675 3 +      7119 G-TA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121283 3 + 195417433 g-TA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235525 3 -   7961872 G-TA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73928 3 -    116970 T-TA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3177 3 +     27962 T-TA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3072 3 +      6077 T-TA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3163 3 +      5971 T-TA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3085 3 +      5932 T-TA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1427 3 -      4390 T-TA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390862 3 - 209938924 T-TA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3034 3 +      5979 T-TA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3796 3 -      4301 T-TA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7023 3 +     16473 T-TA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108199 3 + 121099817 T-TA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29766 3 -     47369 T-TA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30152 3 -     79414 T-TA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26843 3 -     34454 T-TA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14246 3 -     22428 T-TA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29398 3 -     47109 T-TA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237456 3 +   5703754 T-TA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7046 3 +     21866 T-TA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115114 3 +    313613 T-TC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24422 3 +     27374 G-TA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27936 3 +     58920 G-TA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14432 3 -     45317 G-TA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22091 3 -     42441 G-TA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24769 3 -     29113 G-TA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27843 3 -     48123 G-TA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48399 3 +     77746 T-TT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857460 3 -   1910179 T-GC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670486 4 +  18376816 tttt
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867554 3 +   3870691 T-TC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5824 3 -     97271 T-TA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124063 3 +    196729 T-TA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390350 3 +   1523678 G-TA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13283 3 +     22964 T-TA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1860 3 +      5583 T-TA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190756 3 +    199430 T-TA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104708 3 -    539355 T-TA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6041 3 +      6850 T-TA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6092 3 +     20590 T-TA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352306 3 - 186847797 g-TA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18965 3 -     31044 A-AA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479327 3 -    610378 T-TA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19968 3 +     26378 G-TA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32646 3 -     78344 G-TA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19293 3 +     25722 G-TA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27598 3 -     62838 G-TA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27644 3 +     46913 G-TA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8453 3 -     28527 G-TA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29535 3 -     64340 G-TA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27572 3 -     63452 G-TA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9017 3 +     22490 G-TA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2443 3 -      6147 G-TA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9348 3 -     13050 G-TA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254588 3 -   6242583 G-TA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         612 3 +     19340 G-TA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172637 3 -    200418 T-TA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479606 3 -  10818551 T-TA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1832984 3 -   4065304 t-ta
i Tupaia_chinensis.KB320699.1                            C 0 I 280
s Tupaia_tana.TupTan_flattened_line_394                       7252 3 -     70247 T-TA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360411 3 -  33153633 T-TA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2864 3 -     21056 T-TC
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181002 3 +   5085361 T-TA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24394 3 -     30710 T-TA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23301 3 -    147434 T-TA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75483 3 +   5488506 T-TA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104143 3 -    112863 T-TA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173333 3 -    224448 T-TC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28039 3 -     86975 T-TA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       337 3 -       753 T-TA
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595              48 3 +      1812 T-TA
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Panthera_tigris.KE722367.1                               3971628 8 +   8748460 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4642 1 +     36723 A
s Acinonyx_jubatus.LLWD01001279.1                           811970 1 +   1699592 A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24286 1 +     63021 G
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414499 1 +  29979442 A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214812 1 +    347723 a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17232 1 -     61208 A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46958 1 +     53615 A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42919 1 +     44087 A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15544 1 -     21945 A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17227 1 +     32033 A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71398 1 -     84148 A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43637 1 -     78289 A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43076 1 +     55831 A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41526 1 -     64179 A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23160 1 -     24835 A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40151 1 +     45454 A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45797 1 +     70886 A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7973 1 +     30854 A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32109 1 +     42133 A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584495 1 +   2318259 A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176287 1 -    412891 G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49592 1 -     68529 A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     352 1 +     17741 A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              977 1 -     15923 A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1252 1 -     16391 A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                812 1 -     17186 A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15195 1 -     32367 A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18734 1 -     45910 A
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4567 1 -     15198 G
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273861 1 +  21539123 A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10028 1 +     48076 A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5165 1 -     28759 A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32718 1 +     44353 A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48088 1 -     71267 A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22147 1 -     33135 A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5337 1 +     11645 A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5343 1 -     19611 A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956168 1 -  23207421 A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3377 1 -      4711 A
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85486 1 +    124022 A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21018 1 +    288883 A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355404 1 +  48749331 A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753972 1 +   1948126 A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544111 1 -  45695690 A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529136 1 -   4408762 A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7034 1 +     28062 A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42328 1 -     91139 A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19854 1 +     95584 A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19767 1 +    119600 A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9334 1 +     18648 A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8873 1 -     13885 A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             939 1 -      8861 A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453332 1 + 189096842 A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                854 1 +      8664 A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630152 1 +  17673402 A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664438 1 +   7040546 A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208098 1 +   1652518 A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504515 1 +  60362399 A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8151 1 -     23171 A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221494 1 +   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614629 1 +  59632846 a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106210 1 -  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408207 1 -  46296322 A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590480 1 +  44709034 A
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269420 1 +    496798 a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                502 1 -      1021 G
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26833 1 -     39886 A
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78452 1 -    217609 A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 239
s Cavia_aperea.AVPZ01000300.1                              4995549 1 +  23392119 a
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998991 1 +  23407841 A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62072 1 -     66877 A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4252 1 -     12580 A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42310 1 +     53515 A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370241 1 -  26074798 A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7130 1 -     34880 A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66225 1 -     89041 A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1349 1 -      5494 A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491307 1 -  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18140 1 +     27315 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140141 1 -   4669795 A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43883 1 +     47900 A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43708 1 -     44860 A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43696 1 -    148725 A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10956 1 -     17524 A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26678 1 -     34525 A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21570 1 +     36323 A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11936 1 -     19938 A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29754 1 -     33796 A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4271 1 -     15404 A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8132 1 -     32913 G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18545 1 -     40346 G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18800 1 +    216457 G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18593 1 +     39636 G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1237999 1 -   2543920 a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3182 1 +      5346 G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41665 1 -    112038 A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7236 1 +     34062 A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342461 1 +  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9008 1 -     44032 A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303785 1 - 135778131 A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13905 1 +     15858 A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605481 1 -    839153 A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408223 1 -   2368649 A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378098 1 - 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1647 1 -     84244 A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806323 1 +  53390261 A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1910 1 -      8242 A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43461 1 -     83289 A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113868 1 - 224834208 G
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6581 1 +     12657 A
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3422 1 +     87169 A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644136 1 -   1526836 A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17453 1 +     50838 G
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3433 1 +     36344 A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27232 1 +     75252 A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109280 1 -   2246927 A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291683 1 +  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624497 1 -  35494412 A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864310 1 -  20541912 G
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663596 1 -   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138384 1 -    198055 A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97989 1 -    115145 A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949610 1 -  37912305 A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4545 1 -     10735 A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9493 1 +     14636 A
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853854 1 - 111700974 A
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5373 1 +     19438 a
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238864 1 -    607251 A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107675 1 -  10337057 A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30147 1 +    110024 g
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12134 1 +     18970 g
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915234 1 +  41312741 A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577941 1 +  14770903 A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040469 1 -   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374393 1 +  39960074 a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411179 1 -    498745 a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665234 1 +   7059049 a
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               261988 1 +  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64047 1 -    133382 A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4264 1 +      7672 A
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13880 1 -     24895 A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41589 1 -     70999 A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85551 1 +    112731 A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42120 1 +     68309 A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52446 1 -     65740 A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23075 1 -     75513 A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47272 1 -     97555 A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3997 1 +     30972 A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41717 1 -     52037 A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58119 1 -    111500 A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245879 1 - 206538554 A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115665 1 - 205367284 A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26766 1 -     30238 A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124148 1 -    137831 a
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7693 1 +     22493 a
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19759 1 -     32986 A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 280 1 -     28519 A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90556 1 -     95226 A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33629 1 -     36801 a
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4944 1 -      8343 A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253956 1 - 186649187 A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1120 1 -     78134 a
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13805 1 -     40692 A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35207 1 +     49394 A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60075 1 -     66874 A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8949 1 -     42923 A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15949 1 -     53142 A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29910 1 -    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8314 1 +     48891 A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6068 1 +      6687 A
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6757 1 -     36432 A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49901 1 +     49977 A
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141964 1 -    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68827 1 +     83186 A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70954 1 +    143317 A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               4999 1 +     12352 A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12183 1 +     55766 A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051781 1 + 191637585 A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800659 1 +  11177569 A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3605 1 -    135385 A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385977 1 +   7955117 A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1459 1 +     11955 A
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2284 1 -     16823 A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238795 1 +   9596543 g
i Jaculus_jaculus.JH725527.1                             C 0 I 9
s Kogia_breviceps.KogBre_flattened_line_3970                 64763 1 -     97402 A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42404 1 +    110728 A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61801 1 -     65777 A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758598 1 +  30322482 A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3318 1 -     13097 G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3072 1 +      5940 G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2902 1 -      5717 G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9277 1 -     11567 C
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10658 1 -     12945 C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8127 1 +     29618 A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8123 1 +     31569 A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8133 1 +     24756 A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8133 1 +     16388 A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812648 1 -   3914936 A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16974 1 +     24238 G
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333804 1 +    662738 A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333026 1 -   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9711 1 +     19643 A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043368 1 -   6120653 A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080149 1 +  43346337 g
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613784 1 +  59628241 a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44410 1 -     61512 A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372072 1 -  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24335 1 +     30207 A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21438 1 -     24934 A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24288 1 +     30527 A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35464 1 -     50087 A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45208 1 +     51645 A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414411 1 - 187317192 A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398641 1 +  25927173 A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47813 1 -     62418 A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  351 1 +     14901 A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44285 1 +     59329 A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270193 1 +    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  469 1 +      1732 A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1991 1 +     17132 A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222337 1 -    270270 A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321490 1 +  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356322 1 -    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672671 1 -    737560 A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219955 1 +    317179 A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500197 1 +  40650429 A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149498 1 +    207569 A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25338 1 -     74585 A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49287 1 -    140813 G
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428378 1 +  29670104 G
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80348 1 +     93471 A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9443 1 +     17804 A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9945 1 -     12984 A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18259 1 -     26561 A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983736 1 +  93316391 A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44905 1 +    145209 A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184253 1 +    200668 G
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961595 1 +  27267610 G
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362358 1 -   8254450 a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41259 1 -     48117 A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21498 1 -     27822 A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7655 1 +     27589 A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51525 1 -     62432 A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352240 1 +    437263 A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178420 1 +    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24675 1 -     82753 A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17662 1 -     63510 A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38299 1 +     47283 A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592326 1 + 120012414 T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686711 1 + 129401213 T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216568 1 +  89631738 T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39496007 1 + 130317789 T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82458 1 -     86153 A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354267 1 +  14710649 A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792549 1 +  10118263 g
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386709 1 +   6019432 a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382528 1 +   4330536 a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1356 1 +     18357 A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118874 1 +    130748 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945361 1 +   3037898 A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28149 1 +     34575 A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468250 1 -  31847680 a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226409 1 -   7148211 A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127366 1 -    149072 a
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52891 1 -    132029 A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8986 1 -     16345 A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14871 1 +     22201 A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413092 1 -  22158432 A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25269 1 -     54323 A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197377 1 +   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635739 1 + 196305487 A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2497 1 -      3937 A
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564004 1 - 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550340 1 -   3988456 G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11054263 1 -  11899542 A
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450847 1 +   2017862 a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435440 1 -    630418 A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13440 1 +    150152 A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91930 1 -    140218 G
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2827 1 -     41509 G
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095679 1 +  10937097 A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12788 1 -     14239 A
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102810 1 - 174332312 G
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38424 1 +    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39308 1 -     51505 a
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352311 1 +   1103335 A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403434 1 -  44047080 A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3953 1 +     17875 A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471985 1 - 189151597 A
i Pan_troglodytes.CM009242.2                             I 3 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23591 1 -    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18460917 1 -  18783137 A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614872 1 +   2937107 a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242323 1 - 183742232 A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8785 1 +     21308 A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291359 1 -  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21433 1 -     27687 A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14579 1 +     16796 A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21390 1 -     23640 A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14245 1 +     78924 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25521 1 +     31479 A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17890 1 -     24908 A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         942 1 +      9367 A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246023 1 +  18517816 G
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11534 1 -     15039 A
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1597 1 +     55023 A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1147 1 -     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1736 1 +     40849 A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253400 1 +  14605196 A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2881 1 +     22231 A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64041 1 +    207309 A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5134 1 -     25401 A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30877 1 +     58159 A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31153 1 +     63561 A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30913 1 +     51148 A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555883 1 -   4542175 A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30897 1 +     51125 A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3621 1 -      8168 A
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7300 1 +     39866 G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2384 1 -      9282 G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41788 1 -     87950 G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42182 1 -     88961 G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6880 1 -     39403 G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41831 1 +     87928 G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6877 1 -     60166 G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13814 1 -     67232 G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41730 1 -     90634 G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43197 1 +     89403 G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177109 1 - 189387572 A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191926 1 -   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26732 1 +     69807 A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43928 1 -     80239 A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2454 1 +      3019 A
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981753 1 +   4620579 A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565221 1 -   2598838 A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2857 1 -      7103 A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3454 1 -     11706 A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7190 1 -     30655 A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33515 1 +     46564 A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93786 1 -     98465 A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7423 1 +     35169 A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36628 1 +     52041 G
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51303 1 -     66298 a
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3837 1 -     18639 A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840023 1 -  28871421 A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536532 1 -   4952924 A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098231 1 +  38429054 A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26106 1 +     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152598 1 -   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6973 1 +     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52359 1 +     55069 A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021924 1 -  90668790 G
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913919 1 +   3329780 A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              678 1 +      7119 A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121286 1 + 195417433 A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235528 1 -   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73931 1 -    116970 A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3180 1 +     27962 G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3075 1 +      6077 G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3166 1 +      5971 G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3088 1 +      5932 G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1430 1 -      4390 G
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390865 1 - 209938924 G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3037 1 +      5979 G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3799 1 -      4301 G
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7026 1 +     16473 A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108202 1 + 121099817 A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29769 1 -     47369 A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30155 1 -     79414 A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26846 1 -     34454 A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14249 1 -     22428 A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29401 1 -     47109 A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237459 1 +   5703754 A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7049 1 +     21866 A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115117 1 +    313613 G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24425 1 +     27374 A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27939 1 +     58920 A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14435 1 -     45317 A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22094 1 -     42441 A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24772 1 -     29113 A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27846 1 -     48123 A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48402 1 +     77746 T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857463 1 -   1910179 A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670490 1 +  18376816 a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867557 1 +   3870691 A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5827 1 -     97271 A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124066 1 +    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390353 1 +   1523678 A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13286 1 +     22964 A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1863 1 +      5583 A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190759 1 +    199430 A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104711 1 -    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6044 1 +      6850 A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6095 1 +     20590 A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352309 1 - 186847797 A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18968 1 -     31044 A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479330 1 -    610378 G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19971 1 +     26378 A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32649 1 -     78344 A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19296 1 +     25722 A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27601 1 -     62838 A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27647 1 +     46913 A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8456 1 -     28527 A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29538 1 -     64340 A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27575 1 -     63452 A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9020 1 +     22490 A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2446 1 -      6147 A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9351 1 -     13050 A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254591 1 -   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         615 1 +     19340 A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172640 1 -    200418 A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479609 1 -  10818551 A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833267 1 -   4065304 a
i Tupaia_chinensis.KB320699.1                            I 280 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7255 1 -     70247 A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360414 1 -  33153633 A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2867 1 -     21056 A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181005 1 +   5085361 A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24397 1 -     30710 A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23304 1 -    147434 A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75486 1 +   5488506 A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104146 1 -    112863 A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173336 1 -    224448 A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28042 1 -     86975 A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       340 1 -       753 A
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595              51 1 +      1812 A
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Capromys_pilorides.CapPil_scaffold_652123                    670 0 -      1880 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Sus_scrofa.CM000828.4                                    6640031 2928 +  69701581 I
e Panthera_tigris.KE722367.1                               3971628 8 +   8748460 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Cercopithecus_pogonias.k141_6079                           24640 0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         2242 0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       26083 0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        31144 0 -     45857 C
e Cercopithecus_mona.ctg39                                  268810 0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  363094 0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                           10498 0 -     25376 C
e Cercopithecus_cephus.k141_4183004                           5878 0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        25912 0 -     40656 C
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4643 1 +     36723 T
s Acinonyx_jubatus.LLWD01001279.1                           811971 1 +   1699592 T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 60
s Acomys_cahirinus.AcoCah_scaffold_21377                     24287 1 +     63021 T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414500 1 +  29979442 T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214813 1 +    347723 t
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17233 1 -     61208 C
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46959 1 +     53615 T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42920 1 +     44087 T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15545 1 -     21945 T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17228 1 +     32033 T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71399 1 -     84148 T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43638 1 -     78289 T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43077 1 +     55831 T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41527 1 -     64179 T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23161 1 -     24835 T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40152 1 +     45454 T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45798 1 +     70886 T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7974 1 +     30854 T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32110 1 +     42133 T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584496 1 +   2318259 T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176288 1 -    412891 T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49593 1 -     68529 T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     353 1 +     17741 T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              978 1 -     15923 T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1253 1 -     16391 T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                813 1 -     17186 T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15196 1 -     32367 A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18735 1 -     45910 T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4568 1 -     15198 C
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273862 1 +  21539123 T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10029 1 +     48076 T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5166 1 -     28759 T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32719 1 +     44353 T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48089 1 -     71267 T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22148 1 -     33135 T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5338 1 +     11645 T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5344 1 -     19611 T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956169 1 -  23207421 T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3378 1 -      4711 T
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85487 1 +    124022 T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21019 1 +    288883 T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355405 1 +  48749331 T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753973 1 +   1948126 T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544112 1 -  45695690 T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529137 1 -   4408762 T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7035 1 +     28062 T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42329 1 -     91139 T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19855 1 +     95584 T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19768 1 +    119600 T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9335 1 +     18648 T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8874 1 -     13885 T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             940 1 -      8861 T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453333 1 + 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                855 1 +      8664 T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630153 1 +  17673402 T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664439 1 +   7040546 T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208099 1 +   1652518 T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504516 1 +  60362399 T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8152 1 -     23171 T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221495 1 +   9314153 t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614630 1 +  59632846 t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106211 1 -  63665305 t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408208 1 -  46296322 C
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590481 1 +  44709034 C
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269421 1 +    496798 t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                503 1 -      1021 T
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 I 6
s Castor_canadensis.CasCan_scaffold_39952                    26834 1 -     39886 T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78692 1 -    217609 t
i Catagonus_wagneri.CatWag_scaffold_2839                 I 239 C 0
s Cavia_aperea.AVPZ01000300.1                              4995550 1 +  23392119 t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998992 1 +  23407841 T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62073 1 -     66877 T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4253 1 -     12580 T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42311 1 +     53515 T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370242 1 -  26074798 C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7131 1 -     34880 C
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66226 1 -     89041 C
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1350 1 -      5494 T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491308 1 -  27778364 t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18141 1 +     27315 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140142 1 -   4669795 T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43884 1 +     47900 T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43709 1 -     44860 T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43697 1 -    148725 T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10957 1 -     17524 T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26679 1 -     34525 T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21571 1 +     36323 T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11937 1 -     19938 G
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 5
s Cheirogaleus_major.k141_666340                             29755 1 -     33796 T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4272 1 -     15404 T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8133 1 -     32913 T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18546 1 -     40346 T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18801 1 +    216457 T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18594 1 +     39636 T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238000 1 -   2543920 t
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3183 1 +      5346 T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41666 1 -    112038 T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7237 1 +     34062 T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342462 1 +  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9009 1 -     44032 T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303786 1 - 135778131 T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13906 1 +     15858 T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 5
s Choloepus_hoffmanni.KN194906.1                            605482 1 -    839153 T
i Choloepus_hoffmanni.KN194906.1                         C 0 I 5
s Colobus_angolensis.KN981557.1                             408224 1 -   2368649 T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378099 1 - 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1648 1 -     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806324 1 +  53390261 T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1911 1 -      8242 T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43462 1 -     83289 T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113869 1 - 224834208 T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6582 1 +     12657 T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3423 1 +     87169 T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644137 1 -   1526836 C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17454 1 +     50838 T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3434 1 +     36344 T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27233 1 +     75252 T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109281 1 -   2246927 T
i Dasypus_novemcinctus.JH564415.1                        C 0 I 5
s Daubentonia_madagascariensis.ctg71                        291684 1 +  12879189 T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624498 1 -  35494412 T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864311 1 -  20541912 T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663597 1 -   1390856 t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138385 1 -    198055 T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97990 1 -    115145 C
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949611 1 -  37912305 T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4546 1 -     10735 T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9494 1 +     14636 T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853855 1 - 111700974 T
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5374 1 +     19438 T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238865 1 -    607251 T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107676 1 -  10337057 T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30148 1 +    110024 t
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12135 1 +     18970 t
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915235 1 +  41312741 T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577942 1 +  14770903 T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040470 1 -   4378816 t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374394 1 +  39960074 t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411180 1 -    498745 t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665235 1 +   7059049 t
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               261989 1 +  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64048 1 -    133382 T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4265 1 +      7672 T
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13881 1 -     24895 T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41590 1 -     70999 T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85552 1 +    112731 T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42121 1 +     68309 T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52447 1 -     65740 T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23076 1 -     75513 T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47273 1 -     97555 T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3998 1 +     30972 T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41718 1 -     52037 T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58120 1 -    111500 T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245880 1 - 206538554 T
i Felis_catus.CM001381.2                                 C 0 I 60
s Felis_catus_fca126.CM031415.1                          185115666 1 - 205367284 T
i Felis_catus_fca126.CM031415.1                          C 0 I 60
s Felis_nigripes.FelNig_flattened_line_31944                 26767 1 -     30238 T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 60
s Galago_moholi.ctg3793                                     124149 1 -    137831 t
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7694 1 +     22493 t
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19760 1 -     32986 T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 281 1 -     28519 T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90557 1 -     95226 T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33630 1 -     36801 t
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4945 1 -      8343 T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253957 1 - 186649187 T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1121 1 -     78134 t
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13806 1 -     40692 T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35208 1 +     49394 T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60076 1 -     66874 T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8950 1 -     42923 T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15950 1 -     53142 T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29911 1 -    327341 T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8315 1 +     48891 T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6069 1 +      6687 T
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6758 1 -     36432 T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49902 1 +     49977 T
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141965 1 -    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68828 1 +     83186 T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70955 1 +    143317 T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5000 1 +     12352 T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12184 1 +     55766 T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051782 1 + 191637585 T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800660 1 +  11177569 T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3606 1 -    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385978 1 +   7955117 T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1460 1 +     11955 T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2285 1 -     16823 T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64764 1 -     97402 T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42405 1 +    110728 T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61802 1 -     65777 T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758599 1 +  30322482 T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3319 1 -     13097 T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3073 1 +      5940 T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2903 1 -      5717 T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9278 1 -     11567 T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10659 1 -     12945 T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8128 1 +     29618 T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8124 1 +     31569 T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8134 1 +     24756 T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8134 1 +     16388 T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812649 1 -   3914936 T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16975 1 +     24238 T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333805 1 +    662738 T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333027 1 -   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9712 1 +     19643 T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043369 1 -   6120653 T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080150 1 +  43346337 t
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613785 1 +  59628241 t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44411 1 -     61512 T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372073 1 -  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24336 1 +     30207 T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21439 1 -     24934 T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24289 1 +     30527 T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35465 1 -     50087 T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45209 1 +     51645 T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414412 1 - 187317192 T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398642 1 +  25927173 T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47814 1 -     62418 T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  352 1 +     14901 T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44286 1 +     59329 T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270194 1 +    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  470 1 +      1732 T
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1992 1 +     17132 T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222338 1 -    270270 T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321491 1 +  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356323 1 -    752769 T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672672 1 -    737560 T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219956 1 +    317179 T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500198 1 +  40650429 T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149499 1 +    207569 T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25339 1 -     74585 T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49288 1 -    140813 T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428379 1 +  29670104 T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80349 1 +     93471 T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9444 1 +     17804 T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9946 1 -     12984 T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18260 1 -     26561 T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983737 1 +  93316391 T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44906 1 +    145209 T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184254 1 +    200668 T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961596 1 +  27267610 T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362359 1 -   8254450 t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41260 1 -     48117 T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21499 1 -     27822 T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7656 1 +     27589 T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51526 1 -     62432 T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352241 1 +    437263 T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178421 1 +    366855 C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24676 1 -     82753 T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17663 1 -     63510 T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38300 1 +     47283 T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592327 1 + 120012414 T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686712 1 + 129401213 T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216569 1 +  89631738 T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39496008 1 + 130317789 T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82459 1 -     86153 T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354268 1 +  14710649 T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792550 1 +  10118263 t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386710 1 +   6019432 t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382529 1 +   4330536 t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1357 1 +     18357 T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118875 1 +    130748 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 5
s Nannospalax_galili.KL204047.1                             945362 1 +   3037898 T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28150 1 +     34575 T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468251 1 -  31847680 t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226410 1 -   7148211 T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127367 1 -    149072 C
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52892 1 -    132029 T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8987 1 -     16345 T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14872 1 +     22201 T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413093 1 -  22158432 T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25270 1 -     54323 T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197378 1 +   9404916 t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635740 1 + 196305487 T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2498 1 -      3937 T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564005 1 - 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550341 1 -   3988456 T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11054264 1 -  11899542 T
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450848 1 +   2017862 t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435441 1 -    630418 T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13441 1 +    150152 T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91931 1 -    140218 T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2828 1 -     41509 T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095680 1 +  10937097 T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12789 1 -     14239 T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102811 1 - 174332312 C
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38425 1 +    559221 t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39309 1 -     51505 t
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352312 1 +   1103335 T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403435 1 -  44047080 T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3954 1 +     17875 T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471986 1 - 189151597 T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23592 1 -    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 60
s Panthera_pardus.KV860321.1                              18460918 1 -  18783137 T
i Panthera_pardus.KV860321.1                             C 0 I 60
s Pantholops_hodgsonii.KE114653.1                          1614873 1 +   2937107 t
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242324 1 - 183742232 T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8786 1 +     21308 T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291360 1 -  20919399 T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21434 1 -     27687 T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14580 1 +     16796 T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21391 1 -     23640 T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14246 1 +     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25522 1 +     31479 T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17891 1 -     24908 T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         943 1 +      9367 T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246024 1 +  18517816 T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11535 1 -     15039 T
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1598 1 +     55023 T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1148 1 -     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1737 1 +     40849 T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253401 1 +  14605196 T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2882 1 +     22231 T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64042 1 +    207309 T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5135 1 -     25401 T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30878 1 +     58159 T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31154 1 +     63561 T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30914 1 +     51148 T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555884 1 -   4542175 T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30898 1 +     51125 T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3622 1 -      8168 T
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7301 1 +     39866 T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2385 1 -      9282 T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41789 1 -     87950 T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42183 1 -     88961 T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6881 1 -     39403 T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41832 1 +     87928 T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6878 1 -     60166 T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13815 1 -     67232 T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41731 1 -     90634 T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43198 1 +     89403 T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177110 1 - 189387572 T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191927 1 -   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26733 1 +     69807 T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43929 1 -     80239 T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2455 1 +      3019 T
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981754 1 +   4620579 T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565222 1 -   2598838 T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2858 1 -      7103 T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3455 1 -     11706 T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7191 1 -     30655 T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33516 1 +     46564 T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93787 1 -     98465 T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7424 1 +     35169 T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36629 1 +     52041 T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51304 1 -     66298 t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3838 1 -     18639 T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840024 1 -  28871421 T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536533 1 -   4952924 T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098232 1 +  38429054 T
i Puma_concolor.QAVW01001104.1                           C 0 I 60
s Pygathrix_cinerea.k141_1153803                             26107 1 +     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152599 1 -   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6974 1 +     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52360 1 +     55069 T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021925 1 -  90668790 T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913920 1 +   3329780 T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              679 1 +      7119 T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121287 1 + 195417433 T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235529 1 -   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73932 1 -    116970 T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3181 1 +     27962 T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3076 1 +      6077 T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3167 1 +      5971 T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3089 1 +      5932 T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1431 1 -      4390 T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390866 1 - 209938924 T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3038 1 +      5979 T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3800 1 -      4301 T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7027 1 +     16473 T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108203 1 + 121099817 T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29770 1 -     47369 T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30156 1 -     79414 T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26847 1 -     34454 T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14250 1 -     22428 T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29402 1 -     47109 T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237460 1 +   5703754 C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7050 1 +     21866 C
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115118 1 +    313613 T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24426 1 +     27374 T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27940 1 +     58920 T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14436 1 -     45317 T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22095 1 -     42441 T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24773 1 -     29113 T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27847 1 -     48123 T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48403 1 +     77746 T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857464 1 -   1910179 T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670491 1 +  18376816 t
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867558 1 +   3870691 T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5828 1 -     97271 T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124067 1 +    196729 T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6642959 1 +  69701581 c
i Sus_scrofa.CM000828.4                                  I 2928 C 0
s Symphalangus_syndactylus.tarseq_199                       390354 1 +   1523678 T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13287 1 +     22964 G
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1864 1 +      5583 T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 5
s Tapirus_indicus.TapInd_scaffold_7432                      190760 1 +    199430 T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104712 1 -    539355 T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6045 1 +      6850 T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6096 1 +     20590 T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352310 1 - 186847797 T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18969 1 -     31044 T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 5
s Tonatia_saurophila.TonSau_scaffold_294                    479331 1 -    610378 T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19972 1 +     26378 T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32650 1 -     78344 T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19297 1 +     25722 T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27602 1 -     62838 T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27648 1 +     46913 T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8457 1 -     28527 T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29539 1 -     64340 T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27576 1 -     63452 T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9021 1 +     22490 T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2447 1 -      6147 T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9352 1 -     13050 T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254592 1 -   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         616 1 +     19340 T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172641 1 -    200418 T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479610 1 -  10818551 T
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833268 1 -   4065304 t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7256 1 -     70247 T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360415 1 -  33153633 T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2868 1 -     21056 T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181006 1 +   5085361 T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24398 1 -     30710 T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23305 1 -    147434 T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75487 1 +   5488506 T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104147 1 -    112863 T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173337 1 -    224448 T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28043 1 -     86975 T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       341 1 -       753 T
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595              52 1 +      1812 T
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Capromys_pilorides.CapPil_scaffold_652123                    670 0 -      1880 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Panthera_tigris.KE722367.1                               3971628 8 +   8748460 I
e Jaculus_jaculus.JH725527.1                               1238796 9 +   9596543 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Cercopithecus_pogonias.k141_6079                           24640 0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         2242 0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       26083 0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        31144 0 -     45857 C
e Cercopithecus_mona.ctg39                                  268810 0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  363094 0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                           10498 0 -     25376 C
e Cercopithecus_cephus.k141_4183004                           5878 0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        25912 0 -     40656 C
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4644 6 +     36723 GATAAC
s Acinonyx_jubatus.LLWD01001279.1                           812032 6 +   1699592 AATCAA
i Acinonyx_jubatus.LLWD01001279.1                        I 60 I 10
s Acomys_cahirinus.AcoCah_scaffold_21377                     24288 6 +     63021 GAGCAC
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414501 6 +  29979442 GATCAG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214814 6 +    347723 gatcag
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17234 6 -     61208 AATTAC
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46960 6 +     53615 GATCAC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42921 6 +     44087 GATCAC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15546 6 -     21945 GATCAC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17229 6 +     32033 GATCAC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71400 6 -     84148 GATTAC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43639 6 -     78289 GATTAC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43078 6 +     55831 GATTAC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41528 6 -     64179 GATTAC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23162 6 -     24835 GATTAC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40153 6 +     45454 GATTGC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45799 6 +     70886 GATTAC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7975 6 +     30854 GATTAC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32111 6 +     42133 GATTAC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584497 6 +   2318259 GATCAC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176289 6 -    412891 GATTGC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49594 6 -     68529 GATCAC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     354 6 +     17741 GATTAC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              979 6 -     15923 GATTAC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1254 6 -     16391 GATTAC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                814 6 -     17186 GATTAC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15197 6 -     32367 AATCAC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18736 3 -     45910 ---AAC
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4569 6 -     15198 GATTGC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273863 6 +  21539123 GATTAC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10030 6 +     48076 GATTAC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5167 6 -     28759 GATTAC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32720 6 +     44353 GATTAC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48090 6 -     71267 GATTAC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22149 6 -     33135 GATTAC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5339 6 +     11645 TATAGC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5345 6 -     19611 GATAGC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956170 6 -  23207421 GATCAC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3379 6 -      4711 GATCAC
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85488 6 +    124022 GATTAC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21020 6 +    288883 GATTAC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355406 6 +  48749331 GATTAC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753974 6 +   1948126 GATTAC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544113 6 -  45695690 GATTAC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529138 6 -   4408762 GATTAC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7036 6 +     28062 GATTAC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42330 6 -     91139 GATTAC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19856 6 +     95584 GATTAC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19769 6 +    119600 GATTAC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9336 6 +     18648 GATTAC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8875 6 -     13885 GATTAC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             941 6 -      8861 GATTAC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453334 6 + 189096842 GATTAC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                856 6 +      8664 GATTAC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630154 6 +  17673402 GATCAC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664440 6 +   7040546 GATCAC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208100 6 +   1652518 GATCAC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504517 6 +  60362399 AATCAG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8153 6 -     23171 AATCAG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221496 6 +   9314153 aatcag
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614631 6 +  59632846 aatcag
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106212 6 -  63665305 aatcag
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408209 6 -  46296322 GATCAC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590482 6 +  44709034 GATCAC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    670 5 -      1880 -ATAAT
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               4871 6 +      5315 GATCGC
i Carollia_perspicillata.CarPer_scaffold_170178          I 16 I 129
s Castor_canadensis.CasCan_scaffold_39952                    26835 6 -     39886 TATTAC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78693 6 -    217609 gggaac
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995551 6 +  23392119 aaTCAT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4998993 6 +  23407841 AATCAT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62074 6 -     66877 AATCAT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4254 6 -     12580 GATTAC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42312 6 +     53515 GATTAC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370243 6 -  26074798 GATTAC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7132 6 -     34880 GATTAC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66227 6 -     89041 GATTAC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491309 6 -  27778364 gatcAC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18142 6 +     27315 GATCAC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140143 6 -   4669795 GATCAC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43885 6 +     47900 GATCAC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43710 6 -     44860 GATCAC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43698 6 -    148725 GATCAC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10958 6 -     17524 GATCAC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26680 6 -     34525 GATCAC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21572 6 +     36323 GATCAC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11943 6 -     19938 GGATCC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 5 C 0
s Cheirogaleus_major.k141_666340                             29756 6 -     33796 GATAAC
i Cheirogaleus_major.k141_666340                         C 0 I 16
s Cheirogaleus_medius.k141_759766                             4273 6 -     15404 GATAAC
i Cheirogaleus_medius.k141_759766                        C 0 I 16
s Cheracebus_lucifer.k141_2312002                             8134 6 -     32913 GATTAT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18547 6 -     40346 GATTAT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18802 6 +    216457 GATTAT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18595 6 +     39636 GATTAT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238001 6 -   2543920 aatCAT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3184 6 +      5346 GATTAC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41667 6 -    112038 GATTAC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7238 6 +     34062 GATTAC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342463 6 +  18827391 GATCAC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9010 6 -     44032 GATCAC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303787 6 - 135778131 GATCAC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13912 6 +     15858 CAATCC
i Choloepus_didactylus.ChoDid_scaffold_70559             I 5 C 0
s Choloepus_hoffmanni.KN194906.1                            605488 6 -    839153 CAATCC
i Choloepus_hoffmanni.KN194906.1                         I 5 C 0
s Colobus_angolensis.KN981557.1                             408225 6 -   2368649 GATCAC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378100 6 - 200372422 GATCAC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1649 6 -     84244 GATCAC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806325 6 +  53390261 GATCAA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1912 6 -      8242 TATCAC
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43463 6 -     83289 GAGTAT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113870 5 - 224834208 GAGCA-
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6583 6 +     12657 GATCAA
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3424 6 +     87169 GATCAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644138 6 -   1526836 AATCAC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17455 6 +     50838 ATTCAT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3435 6 +     36344 AGTCAT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27234 6 +     75252 AATCAT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109287 6 -   2246927 AGATCC
i Dasypus_novemcinctus.JH564415.1                        I 5 C 0
s Daubentonia_madagascariensis.ctg71                        291685 6 +  12879189 GATAAC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624499 6 -  35494412 GATCAC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864312 6 -  20541912 GATTGC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663598 6 -   1390856 gatcAC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138386 6 -    198055 GATCAC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97991 6 -    115145 AGTCAT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949612 6 -  37912305 AATCAT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4547 6 -     10735 AATCAT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9495 6 +     14636 AATCAT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62853856 6 - 111700974 GAACAC
i Echinops_telfairi.JH980293.1                           C 0 I 213
s Eidolon_helvum.AWHC01266696.1                               5375 6 +     19438 GGTCAC
i Eidolon_helvum.AWHC01266696.1                          C 0 I 19
s Elaphurus_davidianus.JRFZ01104969.1                       238866 6 -    607251 GATCAC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107677 6 -  10337057 GATCAC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30149 6 +    110024 gaGAAC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12136 6 +     18970 gaGAAC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915236 6 +  41312741 GATTAG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577943 6 +  14770903 GATCGC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040471 6 -   4378816 gaTCAC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374395 6 +  39960074 gaTCAC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411181 6 -    498745 gaTCAC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665236 6 +   7059049 tattac
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               261990 6 +  21539334 GATCAC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64049 6 -    133382 GATCAC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4266 6 +      7672 GATCAC
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13882 6 -     24895 GATAAC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41591 6 -     70999 GATAAC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85553 6 +    112731 GATAAC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42122 6 +     68309 GATAAC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52448 6 -     65740 GATAAC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23077 6 -     75513 GATAAC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47274 6 -     97555 GATAAC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            3999 6 +     30972 GATAAC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41719 6 -     52037 GATAAC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58121 6 -    111500 GATAAC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245941 6 - 206538554 AATCAA
i Felis_catus.CM001381.2                                 I 60 I 10
s Felis_catus_fca126.CM031415.1                          185115727 6 - 205367284 AATCAA
i Felis_catus_fca126.CM031415.1                          I 60 I 10
s Felis_nigripes.FelNig_flattened_line_31944                 26828 6 -     30238 AATCAA
i Felis_nigripes.FelNig_flattened_line_31944             I 60 I 10
s Galago_moholi.ctg3793                                     124150 6 -    137831 gaTAAC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7695 6 +     22493 gaTAAC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19761 6 -     32986 GATAAC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 282 6 -     28519 GATCAC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90558 6 -     95226 GATCAC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33631 6 -     36801 gaTCAC
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4946 6 -      8343 GATAAC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253958 6 - 186649187 GATAAC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1122 6 -     78134 gatCAC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13807 6 -     40692 GATAAC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35209 6 +     49394 GATAAC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60077 6 -     66874 GATAAC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8951 6 -     42923 GATAAC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15951 6 -     53142 GATAAC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29912 6 -    327341 GATCAA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8316 6 +     48891 GATCAC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6070 6 +      6687 GATCAC
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 I 162
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6759 6 -     36432 GATCAC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49903 6 +     49977 GATCAC
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 C 0
s Hoolock_leuconedys.ctg274                                    141966 6 -    630532 GGTCAC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68829 6 +     83186 GATCAA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70956 6 +    143317 AATCAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5001 6 +     12352 GGTCAC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12185 6 +     55766 GGTCAC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051783 6 + 191637585 GGTCAC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800661 6 +  11177569 GGTCAC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3607 6 -    135385 AATCAC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     385979 6 +   7955117 GATCAC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_2415743                                    1461 6 +     11955 GATAGC
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2286 6 -     16823 GATCAC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64765 6 -     97402 GATCAC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42406 6 +    110728 GATTAC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61803 6 -     65777 GATCGC
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758600 6 +  30322482 GATAAC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3320 6 -     13097 GATTAC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3074 6 +      5940 GATTAC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2904 6 -      5717 GATTAC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9279 6 -     11567 GATTAC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10660 6 -     12945 GATTAC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8129 6 +     29618 GATAAT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8125 6 +     31569 GATAAT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8135 6 +     24756 GATAAT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8135 6 +     16388 GATAAT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812650 6 -   3914936 GATCAG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16976 6 +     24238 GATCAT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             333806 6 +    662738 GATCAC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333028 6 -   1826925 GATCAC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9713 6 +     19643 GATAAC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043370 6 -   6120653 GATAAC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080151 6 +  43346337 gaTCAC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613786 6 +  59628241 aatcag
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44412 6 -     61512 GATCAC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372074 6 -  60120075 GATCAC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24337 6 +     30207 GATCAC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21440 6 -     24934 GATCAC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24290 6 +     30527 GATCAC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35466 6 -     50087 GATCAC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45210 6 +     51645 GATCAC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414413 6 - 187317192 GATCAC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398643 6 +  25927173 GATCAC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47815 6 -     62418 GATCAC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  353 6 +     14901 GATCAC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44287 6 +     59329 GATCAC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270195 6 +    668171 GATCAC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  471 6 +      1732 GATCAC
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1993 6 +     17132 GATCAC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222339 5 -    270270 -GTCAC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 19
s Mandrillus_leucophaeus.scaffold280                        321492 6 +  24302211 GATCAC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356324 6 -    752769 GATCAC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672673 6 -    737560 GATCAC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219957 6 +    317179 GATCAC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500199 6 +  40650429 GATCAC
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                       149500 6 +    207569 GATCAC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25340 6 -     74585 GATCAG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49289 6 -    140813 GAGCAC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428380 5 +  29670104 GAGCA-
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80350 6 +     93471 GATCAC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9445 6 +     17804 GATTAC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9947 6 -     12984 GATTAC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18261 6 -     26561 GATTAC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983738 6 +  93316391 GATAAC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    44907 6 +    145209 GAACAC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 209
s Micronycteris_hirsuta.MicHir_scaffold_2233                184255 6 +    200668 GATTGC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961597 6 +  27267610 GAGAAC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362360 6 -   8254450 aatCGC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41261 6 -     48117 AATCGC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21500 6 -     27822 GATCAC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7657 6 +     27589 GATCAG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51527 6 -     62432 GATAAC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352242 6 +    437263 GATCAC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178422 6 +    366855 GATTGC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24677 6 -     82753 GATCGC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17664 6 -     63510 GATCAA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38301 6 +     47283 GATCAC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592328 6 + 120012414 GAGCAC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686713 6 + 129401213 GAGCAC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216570 6 +  89631738 GAGCAC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39496009 6 + 130317789 GAGCAC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82460 6 -     86153 GATCAC
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354269 6 +  14710649 GATTAG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792551 6 +  10118263 gATCGC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386711 6 +   6019432 gaTCGC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382530 6 +   4330536 gatCGC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1358 6 +     18357 GATCGC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118881 6 +    130748 TAATCC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 5 C 0
s Nannospalax_galili.KL204047.1                             945363 6 +   3037898 GATCAC
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28151 6 +     34575 GATCAC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468252 6 -  31847680 gatcAG
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226411 6 -   7148211 GATCAC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127368 6 -    149072 GATTGC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52893 6 -    132029 GGTCAC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8988 6 -     16345 GGTCAC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14873 6 +     22201 GGTCAC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413094 6 -  22158432 GGTCAC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25271 6 -     54323 GGTCAC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197379 6 +   9404916 aatcag
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635741 6 + 196305487 GATAAC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2499 6 -      3937 GATAAC
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564006 6 - 199412804 GATAAC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550342 6 -   3988456 GATCAT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11054265 6 -  11899542 AATCAT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450849 6 +   2017862 gatcAG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435442 6 -    630418 GATCAC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13442 6 +    150152 GATCAC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91932 6 -    140218 GAGAGC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2829 6 -     41509 GAGTAC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095681 6 +  10937097 GATCAC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12790 6 -     14239 AATCAC
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102812 6 - 174332312 GATCAT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38426 6 +    559221 aatcaG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39310 6 -     51505 gatAAC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352313 6 +   1103335 GATAAC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403436 6 -  44047080 GATCAC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3955 6 +     17875 GATCAC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1471987 6 - 189151597 GATAAC
i Pan_troglodytes.CM009242.2                             C 0 I 84
s Panthera_onca.PanOnc_flattened_line_3271                   23653 6 -    230217 AATCAA
i Panthera_onca.PanOnc_flattened_line_3271               I 60 I 10
s Panthera_pardus.KV860321.1                              18460979 6 -  18783137 AATCAA
i Panthera_pardus.KV860321.1                             I 60 I 10
s Panthera_tigris.KE722367.1                               3971636 6 +   8748460 AATCAA
i Panthera_tigris.KE722367.1                             I 8 I 10
s Pantholops_hodgsonii.KE114653.1                          1614874 6 +   2937107 gattAC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242325 6 - 183742232 GATCAC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8787 6 +     21308 GATCAC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291361 6 -  20919399 GATCAC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21435 6 -     27687 GATCAC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14581 6 +     16796 GATCAC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21392 6 -     23640 GATCAC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14247 6 +     78924 GATCAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25523 3 +     31479 ---AGC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17892 3 -     24908 ---AGC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         944 6 +      9367 GATAAT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246025 6 +  18517816 GAGTAC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11536 6 -     15039 GATCAC
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1599 6 +     55023 GATCAC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1149 6 -     89929 GATCAC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1738 6 +     40849 GATCAC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253402 6 +  14605196 GATCAC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2883 6 +     22231 GATCAC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64043 6 +    207309 GATTAC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5136 6 -     25401 GATTAC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30879 6 +     58159 GATTAC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31155 6 +     63561 GATTAC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30915 6 +     51148 GATTAC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555885 6 -   4542175 GATTAC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30899 6 +     51125 GATTAC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3623 6 -      8168 GATCAC
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7302 6 +     39866 GATTAT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2386 6 -      9282 GATTAT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41790 6 -     87950 GATTAT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42184 6 -     88961 GATTAT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6882 6 -     39403 GATTAT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41833 6 +     87928 GATTAT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6879 6 -     60166 GATTAT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13816 6 -     67232 GATTAT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41732 6 -     90634 GATTAT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43199 6 +     89403 GATTAT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177111 6 - 189387572 GATAAC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191928 6 -   9816681 GATAAC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26734 6 +     69807 GATCAC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43930 6 -     80239 GATCAC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2456 6 +      3019 GATCAC
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 I 155
s Prolemur_simus.MPIZ01000396.1                            1981755 6 +   4620579 GATAAC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565223 6 -   2598838 GATAGC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2859 6 -      7103 GATAGC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3456 6 -     11706 GATAGC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7192 6 -     30655 GATAGC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33517 6 +     46564 GATAGC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93788 6 -     98465 GATAGC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7425 6 +     35169 GATAGC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36630 6 +     52041 GAGCAC
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51305 6 -     66298 gatTGC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3839 6 -     18639 GATTAG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840025 6 -  28871421 GGTCAC
i Pteropus_alecto.KB030862.1                             C 0 I 19
s Pteropus_vampyrus.KN525825.1                             3536534 6 -   4952924 GGTCAC
i Pteropus_vampyrus.KN525825.1                           C 0 I 19
s Puma_concolor.QAVW01001104.1                            18098293 6 +  38429054 AATCAA
i Puma_concolor.QAVW01001104.1                           I 60 I 10
s Pygathrix_cinerea.k141_1153803                             26108 6 +     91421 GATCAC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152600 6 -   7812017 GATCAC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6975 6 +     72585 GATCAC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52361 6 +     55069 GATCAC
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021926 6 -  90668790 AAGCAC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913921 6 +   3329780 GACGAC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              680 6 +      7119 GATCAC
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121288 6 + 195417433 GATCAC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235530 6 -   7961872 GATCAC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73933 6 -    116970 GGTCAC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 19
s Saguinus_bicolor.k141_1429097                               3182 6 +     27962 GATTAC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3077 6 +      6077 GATTAC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3168 6 +      5971 GATTAC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3090 6 +      5932 GATTAC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1432 6 -      4390 GATTAC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390867 6 - 209938924 GATTAC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3039 6 +      5979 GATTAC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3801 6 -      4301 GATTAC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7028 6 +     16473 GATTAC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108204 6 + 121099817 GATTAC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29771 6 -     47369 GATTAC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30157 6 -     79414 GATTAC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26848 6 -     34454 GATTAC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14251 6 -     22428 GATTAC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29403 6 -     47109 GATTAC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237461 6 +   5703754 GATTAC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7051 6 +     21866 GATTAC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115119 6 +    313613 GATCAA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24427 6 +     27374 GATCAC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27941 6 +     58920 GATCAC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14437 6 -     45317 GATCAC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22096 6 -     42441 GATCAC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24774 6 -     29113 GATCAC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27848 6 -     48123 GATCAC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48404 6 +     77746 GAGCAT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857465 6 -   1910179 GGTCAC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670492 6 +  18376816 gtTCAC
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867559 6 +   3870691 GATCAT
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525              5829 6 -     97271 GATCAA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124068 6 +    196729 GATCAA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6642960 6 +  69701581 gggaac
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390355 6 +   1523678 GGTCAC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13288 6 +     22964 GATCAC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1870 6 +      5583 TAATCC
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 5 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190761 6 +    199430 GATCAC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104713 6 -    539355 GATCAC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                           352311 6 - 186847797 GATCAC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18975 6 -     31044 GGATCC
i Tolypeutes_matacus.TolMat_scaffold_31955               I 5 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479332 6 -    610378 GATTGC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19973 6 +     26378 GATCAC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32651 6 -     78344 GATCAC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19298 6 +     25722 GATCAC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27603 6 -     62838 GATCAC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27649 6 +     46913 GATCAC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8458 6 -     28527 GATCAC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29540 6 -     64340 GATCAC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27577 6 -     63452 GATCAC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9022 6 +     22490 GATCAC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2448 6 -      6147 GATTAC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9353 6 -     13050 GATCAC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254593 6 -   6242583 GATCAC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         617 6 +     19340 GATCAC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172642 6 -    200418 GATAAC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479611 6 -  10818551 GATCAC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833269 6 -   4065304 GATCAC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7257 6 -     70247 GATCAC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360416 6 -  33153633 GATCAC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2869 6 -     21056 AATCAA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 5
s Ursus_maritimus.KK499267.1                                181007 6 +   5085361 GATCAG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24399 6 -     30710 GATAAC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23306 6 -    147434 GATAAC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75488 6 +   5488506 GATCAC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104148 6 -    112863 AATCAT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173338 6 -    224448 GATCAC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28044 6 -     86975 GATCAG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       342 6 -       753 AATCAT
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595              53 6 +      1812 GACCAC
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Tarsius_wallacei.k141_226975                                6097 0 +     20590 C
e Tarsius_lariang.k141_1780720                                6046 0 +      6850 C
e Jaculus_jaculus.JH725527.1                               1238796 9 +   9596543 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Cercopithecus_pogonias.k141_6079                           24640 0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         2242 0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       26083 0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        31144 0 -     45857 C
e Cercopithecus_mona.ctg39                                  268810 0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  363094 0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                           10498 0 -     25376 C
e Cercopithecus_cephus.k141_4183004                           5878 0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        25912 0 -     40656 C
e Cephalopachus_bancanus.k141_1689090                         1351 0 -      5494 C
e Carlito_syrichta.NW_007259797.1                           269422 0 +    496798 C
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4650 36 +     36723 TATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
s Acinonyx_jubatus.LLWD01001279.1                           812048 30 +   1699592 ----------------------AT-GCC---CA-TGTC-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Acinonyx_jubatus.LLWD01001279.1                        I 10 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24294 44 +     63021 CATTCAGC---AG----GA-GAAT-GTTG---A-TGTC-AGA-AA--G-------------A-A-A-CT-------GAG-A--ATG-A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414507 42 +  29979442 CATTCAAC---TG----G---AAT-ACC----AATGTC-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 9
s Ailurus_fulgens.LNAC01001112.1                            214820 37 +    347723 ----cAAC---TC----G---AGT-GCC----AATGTC--GG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17240 40 -     61208 CATTCAAC---TG----G---AAT-GTTG---A-TATA-G---GG--A-------------A-A-G-TT-------GGA-A--GTG-A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   46966 36 +     53615 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-G--ATG-A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42927 36 +     44087 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15552 36 -     21945 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17235 36 +     32033 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71406 36 -     84148 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43645 36 -     78289 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43084 36 +     55831 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41534 36 -     64179 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23168 36 -     24835 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40159 36 +     45454 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45805 36 +     70886 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              7981 36 +     30854 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32117 36 +     42133 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584503 43 +   2318259 CATTCAAC---TG----A---AAT-GC----TAATGTC-AGC-GA--G-------------AAG-C--T-------GCA-A--ATAGA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176295 43 -    412891 CATTCAGC---TG----G---AAT-GCC----AGTGTC-AGG-AA-AA-------------A-AGA--T-------GGA-A--ATG-A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49600 43 -     68529 CATTCAAC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ATGTG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     360 36 +     17741 CATTCAGC---TG----G---CAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                              985 36 -     15923 CATTCAGC---TG----G---CAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1260 36 -     16391 CATTCAGC---TG----G---CAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                820 36 -     17186 CATTCAGC---TG----G---CAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15203 28 -     32367 TTTTTAAC---TC----A---AAT-GCC----AATGTC-AGG-TA-------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 10
s Arctocebus_calabarensis.k141_1364444                       18739 42 -     45910 CATTTCAC---TA----A---AAT-GC----AAACATT-AGG-GA--A-------------A-A-G-GT-------GAC-A--ATG-G
i Arctocebus_calabarensis.k141_1364444                   C 0 I 20
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4575 42 -     15198 CATTCAGC---CA----G---AAT-GCCAGG----GTC-AGG-AA--A-------------A-AGA--T-------GGA-A--ATG-A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273869 35 +  21539123 CATT-AGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10036 35 +     48076 CATT-AGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5173 35 -     28759 CATT-AGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32726 35 +     44353 CATT-AGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48096 35 -     71267 CATT-AGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22155 35 -     33135 CATT-AGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5345 42 +     11645 CATTCAAC---TG----G---CAT-GCC----AATGTT-AGG-AA--A-------------A-A-T-CT-------GAA-A--ATG-A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5351 42 -     19611 CATTCAAC---TG----G---CAT-GCC----AATGTT-AGG-AA--A-------------A-A-T-CT-------GAA-A--ATG-A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956176 43 -  23207421 CATCCAAC---TG----G---AAT-GC----TAATGTC-AGG-AA--A-------------AAG-C--T-------GGA-A--ATGTA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3385 43 -      4711 CATCCAAC---TG----G---AAT-GC----TAATGTC-AGG-AG--A-------------AAG-C--T-------GGA-A--ATGTA
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85494 43 +    124022 CATTCAAC---TA----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ATAGG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21026 43 +    288883 CATTCAAC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ATGTA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355412 43 +  48749331 CATTCAAC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ATGTA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      753980 43 +   1948126 CATTCAAC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ATGTA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544119 43 -  45695690 CATTCAAC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ATGTA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529144 43 -   4408762 CATTCAAC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ATGTA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7042 36 +     28062 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TC-------GAA-A--ATG-A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42336 36 -     91139 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TC-------GAA-A--ATG-A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19862 36 +     95584 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TC-------GAA-A--ATG-A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19775 36 +    119600 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TC-------GAA-A--ATG-A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9342 36 +     18648 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8881 36 -     13885 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ACG-A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             947 36 -      8861 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453340 36 + 189096842 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                862 36 +      8664 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630160 42 +  17673402 CGTTCAGC---TG----G---AAT-GC----TATTGTC-AGG-GA--A-------------A-A-G--T-------GGA-A--ATGTA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664446 42 +   7040546 CGTTCAGC---TG----G---AAT-GC----TATTGTC-AGG-GA--A-------------A-A-G--T-------GGA-A--ATGTA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208106 42 +   1652518 CGTTCAGC---TG----G---AAT-GC----TATTGTC-AGG-GA--A-------------A-A-G--T-------GGA-A--ATGTA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504523 41 +  60362399 CATTCAA----TG----G---AAT-GCC----AATGTC-AGG-AA--A-------------A-A-GC-T-------GGA-A--ATA-A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8159 41 -     23171 CATTCAA----TG----G---AAT-GCC----AATGTC-AGG-AA--A-------------A-A-GC-T-------GGA-A--ATA-A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221502 41 +   9314153 CATTCAA----TG----G---AAT-GCC----AATGTC-AGG-AA--A-------------A-A-GC-T-------GGA-A--ATA-A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614637 41 +  59632846 CATTCAA----TG----G---AAT-GCC----AATGTC-AGG-AA--A-------------A-A-GC-T-------GGA-A--ATA-A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106218 41 -  63665305 CATTCAA----TG----G---AAT-GCC----AATGTC-AGG-AA--A-------------A-A-GC-T-------GGA-A--ATA-A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408215 43 -  46296322 CATTCAAC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ACAGA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590488 43 +  44709034 CATTCAAC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ACAGA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    675 28 -      1880 CGTTCCAC---TA----G---AAC-A--G--CAATGTC-AGG-AA-------------------------------------------
i Capromys_pilorides.CapPil_scaffold_652123              C 0 I 13
s Carlito_syrichta.NW_007259797.1                           269422 39 +    496798 ---tcaAC---TG----G---AAT-g----ccaaagtc-agg-aa--a-------------a-a-a-ct-------gaa-a--atg-a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                510 43 -      1021 CGTTCAGC---TG----G---AAT-GCC----AGTGCC-AGG-AA-AA-------------A-AGA--C-------AGA-A--ACG-A
i Carollia_perspicillata.CarPer_scaffold_668536          I 6 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26841 42 -     39886 CATTCAAC---TG----A---AAT-GCC----AATGTG-ATG-AA--A-------------A-G-G-CT-------GAA-A--ATG-G
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78699 43 -    217609 tTTTCAAC---TG----G---AAT-C----TTAATGTC-AGG-AA--A-------------AAG-C--T-------GGA-A--ATGTG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995557 28 +  23392119 CATTCAAT---TA----G---AAT-G--G--CAATGTC-AGG-AA-------------------------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 13
s Cavia_porcellus.DS562891.1                               4998999 28 +  23407841 CATTCAAT---TA----G---AAT-G--G--CAATGTC-AGG-AA-------------------------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 13
s Cavia_tschudii.CavTsc_scaffold_23560                       62080 28 -     66877 CATTCAAT---TA----G---AAT-G--G--CAATGTC-AGG-AA-------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 13
s Cebuella_niveiventris.k141_592277                           4260 36 -     12580 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42318 36 +     53515 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370249 36 -  26074798 CATTCAGC---TG----G---AAT-G----------CC-AGG-AA--A-------------A-T-G-TT-------GAA-G--ATG-A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7138 36 -     34880 CATTCAGC---TG----G---AAT-G----------CC-AGG-AA--A-------------A-T-G-TT-------GAA-G--ATG-A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66233 36 -     89041 CATTCAGC---TG----G---AAT-G----------CC-AGG-AA--A-------------A-T-G-TT-------GAA-G--ATG-A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1351 39 -      5494 ---TCAAC---TG----G---AAT-GCC----AAAGTC-AGG-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491315 42 -  27778364 CATTCAAC---TG----G---AAT-GCC----AGTGTC-AGG-AA--G-------------A-A-GC-T-------GAA-A--ATG-A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18148 42 +     27315 CATTCAAC---TG----G---AAT-GCC----AGTGTC-AGG-AA--G-------------A-A-GC-T-------GAA-A--ATG-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140149 36 -   4669795 CATTCAGC---TG----G---AAT-G----------TC-agg-aa--a-------------a-t-g-tt-------gaa-a--atg-a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43891 36 +     47900 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43716 36 -     44860 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43704 36 -    148725 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25912  5 -     40656 --------------------------------------------------------------------------------A--ATG-A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5878  5 +     20796 --------------------------------------------------------------------------------A--ATG-A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            10964 36 -     17524 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26686 36 -     34525 CATTCAGC---TG----G---ATT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10498  5 -     25376 --------------------------------------------------------------------------------A--ATG-A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363094  5 -  39242232 --------------------------------------------------------------------------------A--ATG-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268810  5 +  21565898 --------------------------------------------------------------------------------A--ATG-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31144  5 -     45857 --------------------------------------------------------------------------------A--ATG-A
i Cercopithecus_neglectus.k141_858615                    C 0 I 40
s Cercopithecus_nictitans.k141_2995370                       26083  5 -     32606 --------------------------------------------------------------------------------A--ATG-A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2242  5 +      8499 --------------------------------------------------------------------------------A--ATG-A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24640  5 +     70610 --------------------------------------------------------------------------------A--ATG-A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21578 36 +     36323 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11949 42 -     19938 CCTTCCAC---TA----G---AAT-GCC----AATGCC-AGG-AA--A-------------A-T-C-CT-------GAA-A--ATG-G
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29778 21 -     33796 ------------------------------------TT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Cheirogaleus_major.k141_666340                         I 16 C 0
s Cheirogaleus_medius.k141_759766                             4295 21 -     15404 ------------------------------------GT-AGG-AA--A-------------C-A-A-CT-------GAA-A--ATG-A
i Cheirogaleus_medius.k141_759766                        I 16 C 0
s Cheracebus_lucifer.k141_2312002                             8140 36 -     32913 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-CT-------GAA-A--ATG-A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18553 36 -     40346 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18808 36 +    216457 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18601 36 +     39636 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238007 28 -   2543920 CATTCAAC---TG----G---AAT-GCC----AATGTC-AGG-AA-------------------------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 13
s Chiropotes_albinasus.k141_1946120                           3190 36 +      5346 CATTCAGC---TG----G---AAT-G----------TC-AGG-GA--A-------------A-T-G-TT-------GAA-A--ATG-G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41673 36 -    112038 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TG-------GAA-A--ATG-A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7244 36 +     34062 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TG-------GAA-A--ATG-A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342469 36 +  18827391 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9016 36 -     44032 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303793 36 - 135778131 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13918 44 +     15858 CATTTAAC---TG----G---GAT-GCCAGG----GCC-AGG-AA--AA------------A-A-A-CT-------GAA-A-TCTG-C
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605494 44 -    839153 CATTTAAC---TG----G---GAT-GCCAGG----Gcc-agg-aa--a------------aa-a-a-ct-------gaa-a-tctg-C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408231 21 -   2368649 CATTCAGC---TG----G---AAT-G----------TC-AGG-A--------------------------------------------
i Colobus_angolensis.KN981557.1                          C 0 I 6
s Colobus_guereza.LG01                                      378106 21 - 200372422 CATTCAGC---TG----G---AAT-G----------TC-AGG-A--------------------------------------------
i Colobus_guereza.LG01                                   C 0 I 6
s Colobus_polykomos.k141_906115                               1655 21 -     84244 CATTCAGC---TG----G---AAT-G----------TC-AGG-A--------------------------------------------
i Colobus_polykomos.k141_906115                          C 0 I 6
s Condylura_cristata.JH655891.1                           35806331 41 +  53390261 C-TTCAGC---TG----G---AAT-GTC---CA-TGtc-aag-aa--a-------------a-t-g--t------tgaa-a--atg-c
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1918 42 -      8242 CATTCAAC---AG----G---AAT-GTC----AATGTC-AGG-GA--A-------------A-AGC--T-------GGA-A--ATG-A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43469 42 -     83289 CATTCAAC---TG----G---AAT-GTTG---A-TGTC-AGG-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 14
s Cricetulus_griseus.LT883664.1                          213113875 42 - 224834208 CATTCAAT---TG----G---AAT-GTTG---A-CGTT-GG-GGA--A-------------A-G-G-CT-------GAA-A--ATG-A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6589 41 +     12657 CTTTTGAC---TG----G---AAA-GCC----AATATT-AGG-AA--A-------------A-T-A--T-------CAA-A--GTA-G
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3430 41 +     87169 CATTCAGC---TG----A---AAT-GCC---CA-TGTC-GGG-AA--A-------------A-A-GC-T-------AA--A--ATG-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644144 28 -   1526836 CACTCAGC---TG----G---AAT-GCC----AATGCT-GAA-AA-------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 22
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17461 31 +     50838 CATTCGAC---TA----GAAGAAT-GTC----AATGTC-AAG-AA-------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 13
s Cuniculus_paca.CunPac_flattened_line_7025                   3441 28 +     36344 CATTCAAC---TA----G---AAT-GCC----AATGTT-AGG-AA-------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 13
s Dasyprocta_punctata.DasPun_flattened_line_15900            27240 28 +     75252 CATTCAAC---TA----G---AAT-GCC----AAGGTC-AGG-AA-------------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 13
s Dasypus_novemcinctus.JH564415.1                          2109293 42 -   2246927 CATTCCAC---CA----G---AAT-GCC----AATGCC-AGG-AA--A-------------A-A-C-CT-------GAA-A--TCG-A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291691 42 +  12879189 CATTCAAC---TG----G---AAT-GCC----AATGTT-AGG-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624505 43 -  35494412 CATTCAAC---TA----G---AAT-GC----TAATGTC-TGG-AA--A-------------AAG-C--T-------AGA-A--ATGTA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864318 41 -  20541912 CATTCAGC---TG----G---AAT-GCC----AA-GTC-AGG-AC--A-------------A-AGA--T-------GGA-A--ATG-A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663604 42 -   1390856 CATTCAAC---TG----G---AAT-GCC----AGTGTC-AGG-AA--G-------------A-A-GC-T-------GAA-A--ATG-A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138392 42 -    198055 CATTCAAC---TG----G---AAT-GCC----AGTGTC-AGG-AA--G-------------A-A-GC-T-------GAA-A--ATG-A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    97997 28 -    115145 CATTCACC---TG----G---AAT-GCC----AATGTC-AGG-AA-------------------------------------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 13
s Dipodomys_ordii.KN672350.1                              18949618 42 -  37912305 CATTCAAG---TG----G---AAT-GTC----AATGTC-AGG-GA--A-------------A-A-C-TT-------GAA-T--GTG-A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4553 42 -     10735 CATTCAAG---TG----G---AAT-GTC----AATGTC-AGG-GA--C-------------A-A-C-TT-------GAA-T--GTG-A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9501 28 +     14636 CATTCAAC---TA----G---AAT-G--G--CAATGTC-AGG-AA-------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 13
s Echinops_telfairi.JH980293.1                            62854075 36 - 111700974 TGTTCAAG---CC----G---GAA-G----------TC-CAG-AT--A-------------A-A-G-AT-------GAA-A--ATG-A
i Echinops_telfairi.JH980293.1                           I 213 C 0
s Eidolon_helvum.AWHC01266696.1                               5400 21 +     19438 ------------------------------------TC-AAG-AA--A-------------A-AGT--T-------GGA-A--ATG-A
i Eidolon_helvum.AWHC01266696.1                          I 19 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238872 43 -    607251 CATTCAAC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ATGTA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107683 36 -  10337057 TGTTCAAG---AA----G---GAT-G----------TA-AGG-AA--A-------------A-A-C-Ca-------gaa-a--atg-a
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30155 43 +    110024 CATTCAAC---TG----G---AAT-GTTG---A-TGTC-AGGGAA--A-------------A-G-G-TT-------GAA-A--ATG-A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12142 43 +     18970 CATTCAAC---TG----G---AAC-GTTG---A-TGTC-AGGGAA--G-------------A-G-G-TT-------GAA-A--ATG-A
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915242 42 +  41312741 CATTCAAC---TC----A---AAT-GCC----AATGTC-AGG-GA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577949 42 +  14770903 TATTCAAC---TA----G---ATT-GCC----AATGTC-AGG-AA--A-------------A-AGA--T-------GGA-A--ATG-A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040477 42 -   4378816 CATTCAAC---TG----G---AAT-GCC----AGTGTC-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Equus_asinus.JREZ01000139.1                            C 0 I 11
s Equus_caballus.CM000403.2                               21374401 42 +  39960074 CATTCAAC---TG----G---AAT-GCC----AGTGTC-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Equus_caballus.CM000403.2                              C 0 I 11
s Equus_przewalskii.KK951119.1                              411187 42 -    498745 CATTCAAC---TG----G---AAT-GCC----AGTGTC-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Equus_przewalskii.KK951119.1                           C 0 I 11
s Erinaceus_europaeus.JH835339.1                           3665242 48 +   7059049 cATTTCAT---TG----G---AAT-GC----caatagg-aaa-aa--a-------------c-a-a--aaaacagtgaa-a--tTG-C
i Erinaceus_europaeus.JH835339.1                         C 0 I 10
s Erythrocebus_patas.Contig38                               261996 36 +  21539334 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64055 43 -    133382 CATTCAAC---TG----G---AAT-GC----TAATGTC-AGG-AA--A-------------AAG-C--T-------GGA-A--ATGTA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4272 43 +      7672 CATTCAAC---TG----G---AAT-GC----TAATGTC-AGG-AA--A-------------AAG-C--T-------GGA-A--ATGTA
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13888 42 -     24895 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41597 42 -     70999 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85559 42 +    112731 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42128 42 +     68309 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52454 42 -     65740 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23083 42 -     75513 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47280 42 -     97555 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4005 42 +     30972 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41725 42 -     52037 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58127 42 -    111500 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245957 30 - 206538554 ----------------------AT-GCC---CA-TGTC-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Felis_catus.CM001381.2                                 I 10 C 0
s Felis_catus_fca126.CM031415.1                          185115743 30 - 205367284 ----------------------AT-GCC---C-GTGTC-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Felis_catus_fca126.CM031415.1                          I 10 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26844 30 -     30238 ----------------------AT-GCC---CA-TGTC-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Felis_nigripes.FelNig_flattened_line_31944             I 10 C 0
s Galago_moholi.ctg3793                                     124156 42 -    137831 CATTTCAC---TG----A---AAT-GCAGG----TGTT-AGG-GA--A-------------A-A-T-GT-------GAG-A--ATG-G
i Galago_moholi.ctg3793                                  C 0 I 20
s Galago_senegalensis.k141_991736                             7701 42 +     22493 CATTTCAC---TG----A---AAT-GCAGG----TGTT-AGG-GA--A-------------A-A-T-GT-------GAG-A--ATG-G
i Galago_senegalensis.k141_991736                        C 0 I 20
s Galagoides_demidoff.k141_561628                            19767 42 -     32986 CATTTCAC---TG----A---AAT-GCAG---A-TGTT-AGG-GA--A-------------A-A-G-GT-------GAC-A--ACG-G
i Galagoides_demidoff.k141_561628                        C 0 I 20
s Galeopterus_variegatus.GalVar_scaffold_51812                 288 41 -     28519 CATTCAAC---TG----G---AAT-GCC----AA-GTC-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90564 43 -     95226 CATTCTGC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ATGTA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33637 42 -     36801 CATTCAAC---TG----G---AAT-GCC----AATGTC-AGG-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4952 36 -      8343 TATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                253964 36 - 186649187 TATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1128 42 -     78134 CATTCAAT---TG----G---AAT-GCC----AATATC-AGG-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13813 42 -     40692 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35215 42 +     49394 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60083 42 -     66874 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8957 42 -     42923 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15957 42 -     53142 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29918 41 -    327341 CATTCAAC---TG----A---AAT-GTC---C-GTGTC-AGG-AA--A-------------A-A-GC-T-------GA--A--ATG-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8322 43 +     48891 CATTCAAC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ATAGA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6238 35 +      6687 tATTCAAA---TG----G---GAT-G----------T--GAG-GA--A-------------A-A-G-CC-------AAA-A--ATG-A
i Heterohyrax_brucei.HetBruBak_scaffold_128297           I 162 I 9
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6765 43 -     36432 CATTCTCC---TG----G---AAT-GC----TAATGTC-AGG-AA--A-------------AAA-C--T-------GGA-A--ATGTA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_23202               49909 42 +     49977 CATTCAAC---TG----A---AAT-GCC----AATGTC-AAG-AA--A-------------A-AAC--T-------GGA-A--ATG-A
i Hipposideros_galeritus.HipGal_scaffold_23202           C 0 N 0
s Hoolock_leuconedys.ctg274                                    141972 36 -    630532 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68835 42 +     83186 CATTTAAC---TG----A---AAT-GCC---CA-TGTG-AGG-AA--A-------------A-A-GC-T-------GA-AA--ATG-A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            70962 28 +    143317 CATTCAAC---TA----G---AAT-G--G--TAATGTC-AGG-AA-------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 13
s Hylobates_agilis.k141_1155965                               5007 36 +     12352 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12191 36 +     55766 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051789 36 + 191637585 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800667 36 +  11177569 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3613 28 -    135385 CATTCAAC---TG----G---AAT-GTC----AATGTC-AGG-AA-------------------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 13
s Ictidomys_tridecemlineatus.JH393364.1                     385986 31 +   7955117 ---------------------AAG-GCC----AATCTC-AGG-AT--A-------------A-A-G-CC-------AAA-A--ATG-A
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_2415743                                    1467 42 +     11955 CATTCAAC---TG----G---CAT-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2292 43 -     16823 CTTTCAAC---TG----G---AAT-GC----TAATGTC-AGG-AA--A-------------AAG-C--T-------AGA-A--ATGTA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238805 13 +   9596543 -------------------------------------------------------------t-a-c-tt-------gcc-t--gtg-a
i Jaculus_jaculus.JH725527.1                             I 9 I 10
s Kogia_breviceps.KogBre_flattened_line_3970                 64771 43 -     97402 CATTCAAC---TG----G---AAT-GCTG---A-TGTC-AGG-AA--A-------------AAG-C--T-------GGA-A--ATGTA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42412 36 +    110728 CATTCACC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61809 42 -     65777 TATTCAAC---TA----G---ATT-GCC---CA-TGTC-AGG-AG--A-------------A-AGA--T-------GGA-A--ATG-A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 49
s Lemur_catta.scaffold_24                                 14758606 42 +  30322482 CATTCAAC---TG----G---CAG-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3326 36 -     13097 CATTCAGC---TG----G---AAT-G----------TC-AGG-GA--A-------------A-T-G-TT-------GAA-A--ATG-G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3080 36 +      5940 CATTCAGC---TG----G---AAT-G----------TC-AGG-GA--A-------------A-T-G-TT-------GAA-A--ATG-G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2910 36 -      5717 CATTCAGC---TG----G---AAT-G----------TC-AGG-GA--A-------------A-T-G-TT-------GAA-A--ATG-G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9285 36 -     11567 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10666 36 -     12945 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8135 42 +     29618 CATTCAAC---TG----G---CAT-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8131 42 +     31569 CATTCAAC---TG----G---CAT-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8141 42 +     24756 CATTCAAC---TG----G---CAT-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8141 42 +     16388 CATTCAAC---TG----G---CAT-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812656 42 -   3914936 CATTCAAC---TG----G---AAT-GCC----AATGTT-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     16982 41 +     24238 CATTCAGT---TG----A---AAT-GCC----AGT-CT-AGG-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 12
s Lipotes_vexillifer.KE559953.1                             333812 43 +    662738 CATTCAAC---TG----G---AAT-GC----TAATGTC-AGG-AA--A-------------AAG-C--T-------AGA-A--ATGTA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333034 36 -   1826925 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9719 43 +     19643 CATTTCAC---TG----A---AATAACAG-ACA---TT-AGG-GA--A-------------A-A-G-GT-------GAC-A--ATG-G
i Loris_lydekkerianus.k141_2031736                       C 0 I 20
s Loris_tardigradus.ctg83                                  5043376 43 -   6120653 CATTTCAC---TG----A---AATAACAG-ACA---TT-AGG-GA--A-------------A-A-G-GT-------GAC-A--ATG-G
i Loris_tardigradus.ctg83                                C 0 I 20
s Loxodonta_africana.GL010049.1                           39080157 36 +  43346337 TATTCAAG---CG----G---GAT-G----------CT-GAG-AG--A-------------A-A-G-CT-------GAA-A--ATA-A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613792 41 +  59628241 CATTCGA----TG----G---AAT-GCC----AATGTC-AGG-AA--A-------------A-A-GC-T-------GGA-A--ATA-A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44418 36 -     61512 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372080 36 -  60120075 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24343 36 +     30207 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21446 36 -     24934 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24296 36 +     30527 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35472 36 -     50087 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45216 36 +     51645 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414419 36 - 187317192 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398649 36 +  25927173 CATTCAGC---TG----G---AAT-G----------TC-agg-aa--a-------------a-t-g-tt-------gaa-a--atg-a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47821 36 -     62418 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  359 36 +     14901 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44293 36 +     59329 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270201 36 +    668171 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  477 36 +      1732 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 1999 36 +     17132 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222363 21 -    270270 ------------------------------------TC-AGG-AA--A-------------A-AGC--T-------GGA-A--ATG-A
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 19 C 0
s Mandrillus_leucophaeus.scaffold280                        321498 36 +  24302211 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356330 36 -    752769 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672679 38 -    737560 ----CAAC---TA----G---AAT-GCC----AGTGTc-agg-aa--a-------------a-a-at-t-------gaa-a--atg-a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             219963 38 +    317179 ----CAAC---TA----G---AAT-GCC----AGTGTc-agg-aa--a-------------a-a-at-t-------gaa-a--atg-a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500206 31 +  40650429 ---------------------AAG-GTC----AATCTC-AGG-AA--A-------------A-A-G-CC-------AAA-A--ATG-A
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149506 42 +    207569 TATTCATC---TG----G---AAT-GCC----AATGTC-AGG-AA--A-------------A-AGC--T-------GAA-A--ATG-A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25346 42 -     74585 CATTCAAC---TC----G---AAT-GCC----AATATC-AAG-GA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49295 48 -    140813 CATTCACA---AAATATT-TGAAT-GTTG---A-TGTC-AGA-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428385 43 +  29670104 TATTCAAC---TG----G---AGT-GTTG---A-TGTC-AGGGGA--G-------------A-A-G-CT-------GAA-A--ATG-A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80356 43 +     93471 CATTCAAC---TG----G---AAT-AC----TAATGTC-AGG-AA--A-------------AAG-C--T-------GGA-A--ATGTA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9451 36 +     17804 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9953 36 -     12984 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18267 36 -     26561 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983744 42 +  93316391 CATTCAAT---TG----G---CAT-GCC----AATGtt-agg-aa--a-------------a-a-a-ct-------gaa-a--atg-a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45122 36 +    145209 tATTCAAG---TC----G---GAA-T----------TT-AGG-AT--A-------------A-A-G-AT-------GAA-A--ATG-C
i Microgale_talazaci.MicTal_scaffold_6613                I 209 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184261 42 +    200668 CATTCAGC---TG----G---AAT-GCC----AGTGTC-AGG-GA--A-------------A-AGA--C-------AGA-A--ATG-A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961603 43 +  27267610 TGTTCAAC---TG----G---AAC-ATTG---A-TGTC-AGAGAA--A-------------A-G-G-TT-------GAA-A--ATG-A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362366 42 -   8254450 TATTCAAC---TG----G---AAT-GCC----AATGTC-TGG-AA--A-------------A-AGA--T-------GGA-A--ATG-A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41267 28 -     48117 TATTCAAC---TG----G---AAT-GCC----AATGTC-TGG-AA-------------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 12
s Miopithecus_ogouensis.k141_1534655                         21506 36 -     27822 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7663 42 +     27589 CATTCAAC---TG----G---AAT-GCC----AATGTT-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51533 42 -     62432 CATTCAAC---TG----G---CAT-GCC----AATGTT-AGG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352248 43 +    437263 CATTCAAC---TA----G---AAT-GC----TAATGTC-TGG-AA--A-------------AAG-C--T-------AGA-A--ATGTA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178428 42 +    366855 CATTCAGC---TG----G---AAC-ACC----AATGTC-AGG-AA--A-------------A-AGA--T-------GGA-A--ATG-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24683 43 -     82753 CATTCAAC---TG----A---AAT-GC---TCA-TGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ATGTA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17670 41 -     63510 CATTCAAC---TG----A---AAT-GTC---C-GTGTC-AGG-AA--A-------------A-A-AC-T-------GA--A--ATG-A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38307 42 +     47283 TATTCAAC---TA----G---ATT-GCC----AATGTG-AGG-AA--A-------------A-AGA--T-------GGA-A--ATG-A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592334 44 + 120012414 CATTCAGC---TT----G-GGAAT-GTTG---A-TGTT-AGG-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686719 44 + 129401213 CATTCAGC---TA----G-GGAAT-GTTG---A-TGTT-AGG-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216576 44 +  89631738 CATTCAGC---TG----G-GGAAT-GTTG---A-TGTC-AGG-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39496015 44 + 130317789 CATTCAGC---TA----G-GGAAT-GTTG---A-TGTT-AGG-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82466 42 -     86153 CATTTAAC---TG----G---AAT-GCC----AATGTC-AGG-AA--A-------------A-A-G-CT-------GGA-A--ATG-A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354275 41 +  14710649 CATTCAAC---TC----A---AAT-ACC----AATGTC-AG--GC--A-------------A-A-GC-T-------GAA-A--ATG-A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792557 42 +  10118263 TATTCAAC---TA----G---ATT-GCC----AATGTC-AGG-AA--A-------------A-AGA--T-------GGA-A--ATG-A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386717 42 +   6019432 TATTCAAC---TA----G---ATT-GCC----AATGTC-AGG-AA--A-------------A-AGA--T-------GGA-A--ATG-A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382536 42 +   4330536 TATTCAAC---TA----G---ATT-GCC----AAAGTC-AGG-AA--A-------------A-AGA--T-------GGA-C--ATG-A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1364 42 +     18357 TATTCAAC---TA----G---ATT-GCC----AATGTC-AGG-AA--A-------------A-AGA--T-------GGA-A--ATG-A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118887 42 +    130748 CATTCAAC---TG----G---AAT-GC----AAATGCC-CAC-AA--A-------------A-A-T-CT-------GAA-A--ATG-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945369 42 +   3037898 CATTTAAC---TG----G---AGT-A----TTACTGCC-AGG-AA--A-------------A-G-G-GT-------GAA-A--ATG-A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28157 36 +     34575 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468258 42 -  31847680 CATTCAAC---TG----G---AAT-GCC----AATGTT-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226417 43 -   7148211 CATTCAAC---TA----G---AAT-GC----TAATGTC-TGG-AA--A-------------AAG-C--T-------AGA-A--ATGTA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127374 56 -    149072 CATTCAAC---TG----G---AAT-GCC----AATATC-AAA-AA-AAAAAAAAAAAAAAAA-AGA--T-------GGA-A--ATG-A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52899 36 -    132029 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               8994 36 -     16345 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14879 36 +     22201 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413100 36 -  22158432 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25277 36 -     54323 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197385 41 +   9404916 CATTCAA----TG----G---AAT-GCC----AATGTC-AGG-AA--A-------------A-A-GC-T-------GGA-A--ATA-A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635747 42 + 196305487 CATTTCAC---TG----A---AAT-ACAG---A-TGTT-AGG-GA--A-------------A-A-G-GT-------GAC-A--ATG-G
i Nycticebus_bengalensis.LG01                            C 0 I 20
s Nycticebus_coucang.k141_3846325                             2505 42 -      3937 CATTTCAC---TG----A---AAT-ACAG---A-TGTT-AGG-GA--A-------------A-A-G-GT-------GAC-A--ATG-G
i Nycticebus_coucang.k141_3846325                        C 0 I 20
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564012 42 - 199412804 CATTTTAC---TG----A---AAT-AC-GG--A-TGTT-AGG-GA--A-------------A-A-G-GT-------GAC-A--ATG-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 20
s Ochotona_princeps.JH802162.1                             2550348 41 -   3988456 CATTCACT---TG----A---AAT-GCC----AGT-AC-Agg-aa--a-------------a-a-g-ct-------gaa-a--atg-a
i Ochotona_princeps.JH802162.1                           C 0 I 10
s Octodon_degus.JH651603.1                                11054271 28 -  11899542 CATTCAAC---TA----G---AAT-GCC----AATGTC-AAG-AA-------------------------------------------
i Octodon_degus.JH651603.1                               C 0 I 13
s Odobenus_rosmarus.KB229312.1                             1450855 42 +   2017862 CATTCAAC---TG----G---AAT-GCC----AATGTT-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435448 43 -    630418 CATTCAAC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ATGTA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13448 43 +    150152 CATTCTGC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GAA-A--ATGTA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91938 43 -    140218 CACTCAAC---TG----G---AAC-ATTG---A-TGTC-AGGGAA--A-------------A-G-G-TT-------GAA-A--ATG-A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2835 43 -     41509 CAGTCAAC---TG----C---AAT-ATTG---A-TGTCAGGG-GA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8095687 43 +  10937097 CATTCAAC---TG----G---AAT-GC----TAATGTC-AGG-AA--A-------------AAG-C--T-------AGA-A--ATGTA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12796 36 -     14239 TACTCAAG---TG----G---GAT-G----------TC-AGG-AA--A-------------A-A-G-CA-------GAA-A--ATG-A
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102818 41 - 174332312 CATGCAGT---TG----A---AAT-GCC----AGT-CT-AGG-AA--A-------------A-A-G-CT-------GAA-A--GTG-A
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 13
s Otocyon_megalotis.JAEUCK010005147.1                        38432 41 +    559221 CATTCAA----TG----G---AAT-GCC----AATGTC-AGG-AA--A-------------A-A-GC-T-------GGA-A--ATA-A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39316 42 -     51505 CATTTCAC---TG----A---AAT-GCAGG----TGTT-AGG-GA--A-------------A-A-C-GT-------GAG-A--ATG-G
i Otolemur_crassicaudatus.k141_649260                    C 0 I 20
s Otolemur_garnettii.GL873799.1                             352319 42 +   1103335 CATTTCAC---TG----A---AAT-GCAGG----TGTT-AGG-GA--A-------------A-A-C-GT-------GAG-A--ATG-G
i Otolemur_garnettii.GL873799.1                          C 0 I 20
s Ovis_aries.CM001607.2                                   26403442 43 -  44047080 CATTCAAC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ATTGA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       3961 43 +     17875 CATTCAAC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ATTGA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             11580 40 -     26668 TATTCAGCACTTG----G---AAT-G----------TC-AGG-AA--A-------------A-G-TGTT-------GAA-A--ATG-A
i Pan_troglodytes.NBAG03003091.1                         I 8 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23669 30 -    230217 ----------------------AT-GCC---CA-TGTC-AGG-AA--A-------------A-A-TC-T-------GAA-A--ATG-A
i Panthera_onca.PanOnc_flattened_line_3271               I 10 C 0
s Panthera_pardus.KV860321.1                              18460995 30 -  18783137 ----------------------AT-GCC---CA-TGTc-agg-aa--a-------------a-a-tc-t-------gaa-a--atg-a
i Panthera_pardus.KV860321.1                             I 10 C 0
s Panthera_tigris.KE722367.1                               3971652 30 +   8748460 ----------------------AT-GCC---CA-TGTc-agg-aa--a-------------a-a-tc-t-------gaa-a--atg-a
i Panthera_tigris.KE722367.1                             I 10 C 0
s Pantholops_hodgsonii.KE114653.1                          1614880 43 +   2937107 CATTCAAC---TG----A---AAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GTA-A--ATAGA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242331 36 - 183742232 CATTCAGC---TG----G---AAT-G----------TC-agg-aa--a-------------a-t-g-tt-------gaa-a--atg-a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8793 36 +     21308 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291367 36 -  20919399 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21441 36 -     27687 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14587 36 +     16796 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21398 36 -     23640 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14253 41 +     78924 CATTCAAC---TG----A---AAT-ACC---CA-TGTC-AGG-AA--A-------------A-G-GT-A-------AA--A--ATG-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25526 42 +     31479 CATTTCAC---TA----T---AAT-GCAG-ACA---TT-AGG-GA--A-------------A-A-G-AT-------GAC-A--ATG-G
i Perodicticus_ibeanus.k141_1921260                      C 0 I 20
s Perodicticus_potto.k141_1854441                            17895 42 -     24908 CATTTCAC---TA----T---AAT-GCAG-ACA---TT-AGG-GA--A-------------A-A-G-AT-------GAC-A--ATG-G
i Perodicticus_potto.k141_1854441                        C 0 I 20
s Perognathus_longimembris.PerPac_flattened_line_89005         950 42 +      9367 CATTCAAG---TG----A---AAT-GTC----AATGTC-AGG-GA--A-------------A-A-T-TT-------GAA-T--GTG-A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246031 42 +  18517816 CATTCAAC---TG----C---AAT-GTTG---A-TGTC-GGG-GA--T-------------A-A-G-CT-------GAA-A--ATG-A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              11542 43 -     15039 CATTCAAC---TA----G---AAT-GC----TAATGTC-TGG-AA--A-------------AAG-C--T-------AGA-A--ATGTA
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1605 36 +     55023 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-T--ATT-A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1155 36 -     89929 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1744 36 +     40849 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253408 36 +  14605196 CATTCAGC---TG----G---AAT-G----------Tc-agg-aa--a-------------a-t-g-tt-------gaa-a--atg-a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2889 42 +     22231 TGTTCAAC---TA----G---ATT-GCC----AATGTC-AGG-AA--A-------------A-AGA--T-------GGA-A--ATG-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64049 36 +    207309 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5142 36 -     25401 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30885 36 +     58159 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31161 36 +     63561 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30921 36 +     51148 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555891 36 -   4542175 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30905 36 +     51125 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3629 43 -      8168 CATTCAAC---TG----G---AAT-GC----TAATGTC-AGG-AA--A-------------AGG-C--T-------GGA-A--ATGTA
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7308 36 +     39866 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2392 36 -      9282 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41796 36 -     87950 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42190 36 -     88961 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6888 36 -     39403 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41839 36 +     87928 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6885 36 -     60166 CATTCGGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13822 36 -     67232 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41738 36 -     90634 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43205 36 +     89403 CATTCGGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177117 36 - 189387572 TATTCAGC---TG----G---AAT-G----------TC-GGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191934 36 -   9816681 TATTCAGC---TG----G---AAT-G----------TC-GGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26740 36 +     69807 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              43936 36 -     80239 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2617 35 +      3019 tATTCAAA---TG----G---GAT-G----------T--GAG-GA--A-------------A-A-G-CC-------AAA-A--ATG-A
i Procavia_capensis.ProCapCap_scaffold_255930            I 155 I 9
s Prolemur_simus.MPIZ01000396.1                            1981761 42 +   4620579 CATTCAAC---TG----G---CAG-GCC---CA-TGtt-agg-aa--a-------------a-a-a-ct-------gaa-a--atg-a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565229 42 -   2598838 CATTCAAC---TG----G---CAT-GCC----AATGTt-agg-aa--a-------------a-a-t-ct-------gaa-a--atg-a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2865 42 -      7103 CATTCAAT---TG----G---CAT-GCC----AATGTT-AGG-AA--A-------------A-A-T-CT-------GAA-A--ATG-A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3462 42 -     11706 CATTCAAC---TG----G---CAT-GCC----AATGTT-AGG-AA--A-------------A-A-T-CT-------GAA-A--ATG-A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7198 42 -     30655 CATTCAAC---TG----G---CAT-GCC----AATGTT-AGG-AA--A-------------A-A-T-CT-------GAA-A--ATG-A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33523 42 +     46564 CATTCAAC---TG----G---CAT-GCC----AATGTT-AGG-AA--A-------------A-A-T-CT-------GAA-A--ATG-A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93794 42 -     98465 CATTCAAC---TG----G---CAT-GCC----AATGTT-AGG-AA--A-------------A-A-T-CT-------GAA-A--ATG-A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7431 42 +     35169 CATTCAAC---TG----G---CAT-GCC----AATGTT-AGG-AA--A-------------A-A-T-CT-------GAA-A--ATG-A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36636 48 +     52041 CATtcaca---aaatatt-tgaaa-t----ttgatGTC-AGA-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51311 44 -     66298 CATTCAGC---TA----G---AAT-GC----caatgtc-aga-aaaaa-------------a-aga--t-------gga-a--atg-a
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3845 42 -     18639 CATTCAAC---TC----A---AAT-GCC----AATGTC-AGG-GA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840050 21 -  28871421 ------------------------------------TC-AGG-AA--A-------------A-AGC--T-------GGA-A--ATG-A
i Pteropus_alecto.KB030862.1                             I 19 I 2
s Pteropus_vampyrus.KN525825.1                             3536559 21 -   4952924 ------------------------------------TC-AGG-AA--A-------------A-AGC--T-------GGA-A--ATG-A
i Pteropus_vampyrus.KN525825.1                           I 19 C 0
s Puma_concolor.QAVW01001104.1                            18098309 30 +  38429054 ----------------------AT-GCC---CA-TGTC-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Puma_concolor.QAVW01001104.1                           I 10 C 0
s Pygathrix_cinerea.k141_1153803                             26114 36 +     91421 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152606 36 -   7812017 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              6981 36 +     72585 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52367 43 +     55069 CATTCAGC---TG----A---AAT-GC----TAATGTT-AGG-AA--G-------------AAG-C--T-------GCA-A--ATGTA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021932 44 -  90668790 CTTTCAGC---TG----G-GGAAT-GTTG---A-TGTC-AGG-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913927 42 +   3329780 CATTCAAC---TG----G---AAT-GCC----AATGTC-AAG-AA--A-------------A-AGC--T-------GGA-A--ATG-A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              686 36 +      7119 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121294 36 + 195417433 CATTCAGC---TG----G---AAT-G----------TC-agg-aa--a-------------a-t-g-tt-------gaa-a--atg-a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235536 36 -   7961872 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73958 21 -    116970 ------------------------------------TC-AGG-AA--A-------------A-AGC--T-------GGA-A--ATG-A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 19 C 0
s Saguinus_bicolor.k141_1429097                               3188 36 +     27962 CATTCAGC---TG----G---AAT-G----------TC-AGG-GA--A-------------A-T-G-TT-------GAA-A--ATG-G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3083 36 +      6077 CATTCAGC---TG----G---AAT-G----------TC-AGG-GA--A-------------A-T-G-TT-------GAA-A--ATG-G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3174 36 +      5971 CATTCAGC---TG----G---AAT-G----------TC-AGG-GA--A-------------A-T-G-TT-------GAA-A--ATG-G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3096 36 +      5932 CATTCAGC---TG----G---AAT-G----------TC-AGG-GA--A-------------A-T-G-TT-------GAA-A--ATG-G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1438 36 -      4390 CATTCAGC---TG----G---AAT-G----------TC-AGG-GA--A-------------A-T-G-TT-------GAA-A--ATG-G
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390873 36 - 209938924 CATTCAGC---TG----G---AAT-C----------TC-AGG-GA--A-------------A-T-G-TT-------GAA-A--ATG-G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3045 36 +      5979 CATTCAGC---TG----G---AAT-G----------TC-AGG-GA--A-------------A-T-G-TT-------GAA-A--ATG-G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3807 36 -      4301 CATTCAGC---TG----G---AAT-G----------TC-AGG-GA--A-------------A-T-G-TT-------GAA-A--ATG-G
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7034 43 +     16473 CATTCAAC---TG----A---GAT-GC----TAATGTC-AGG-AA--G-------------AAG-C--T-------GCA-A--ATATA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108210 36 + 121099817 CATTCGGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29777 36 -     47369 CATTCGGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30163 36 -     79414 CATTCGGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26854 36 -     34454 CATTCGGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14257 36 -     22428 CATTCGGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29409 36 -     47109 CATTCGGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--GTG-A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237467 36 +   5703754 CATTCAGC---TG----G---AAT-G----------CC-AGG-AA--A-------------A-T-G-TT-------GAA-G--ATG-A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7057 36 +     21866 CATTCAGC---TG----G---AAT-G----------CC-AGG-AA--A-------------A-T-G-TT-------GAA-G--ATG-A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115125 41 +    313613 C-TTTAGC---TG----G---AAT-GTC---TA-TGTC-AGG-AA--T-------------G-T-A--T------TGAA-A--ATG-C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24433 36 +     27374 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      27947 36 +     58920 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14443 36 -     45317 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22102 36 -     42441 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24780 36 -     29113 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27854 36 -     48123 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48410 43 +     77746 CATTCAAC---TG----A---AAT-GTTG---A-TGTC-AAGGAA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857471 41 -   1910179 CATTCAAC---TG----G---AAT-GCC----AATGTC-AGG-AA--A-------------C-A-A--A-------CAA-A--GTG-C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670498 41 +  18376816 CTTTCAAC---TA----g---aat-g----caaatatt-aaa-aa--a-------------a-a-a--t-------cca-a--aag-a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867566 31 +   3870691 ---------------------AAG-GCC----AATCTC-AGG-AT--A-------------A-A-G-CC-------AAA-A--ATG-A
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5835 42 -     97271 TGTTCAAC---TC----C---AAT-GCC----AATGTC-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124074 41 +    196729 CATTCAAC---TG----A---AAT-GTC---C-GTGTC-AGG-AA--A-------------A-A-GC-T-------GA--A--ATG-A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6642966 43 +  69701581 tcctcaac---tg----g---aAT-C----TTAATGTC-AGG-AA--A-------------AAG-C--T-------GGA-A--ATGTA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390361 36 +   1523678 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATC-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13294 42 +     22964 TATTCAAC---TG----G---AAT-GTC----AATGTC-AGG-AA--A-------------A-AGA--T-------GAA-A--ATG-A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1876 42 +      5583 CATTCAAC---CG----G---AAT-GCC----AATGCC-CAG-AA--A-------------A-A-T-CT-------GAA-C--GTG-A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190767 41 +    199430 TATTCAAC---TG----G---AAT-GCC----AATGTC-AGG-AA--A-------------A-A-GC-T-------GAT-A--ATG--
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104719 42 -    539355 TATTCAAC---TG----G---AAT-GCC----AATGTC-GGG-AA--A-------------A-A-GC-T-------GAT-A--ATG-A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6046 39 +      6850 ---TCAAC---TG----G---AAT-GCC----AAAGTC-AGG-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6097 39 +     20590 ---TCAAC---TG----G---AAT-GCC----AAAGTC-AGG-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352317 36 - 186847797 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   18981 42 -     31044 CGTTCCAC---TA----G---AAT-GCC----AATGCC-AGG-AA--A-------------A-A-C-CT-------GAA-A--ATG-A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479338 42 -    610378 CACTCAGC---TG----G---AAT-GCC----AGTATC-AGG-AA--A-------------A-AGA--T-------GGA-A--ATG-G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        19979 36 +     26378 CATTCACC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32657 36 -     78344 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19304 36 +     25722 CATTCACC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27609 36 -     62838 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27655 36 +     46913 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8464 36 -     28527 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29546 36 -     64340 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27583 36 -     63452 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9028 36 +     22490 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2454 36 -      6147 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9359 36 -     13050 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254599 36 -   6242583 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         623 36 +     19340 CATTCAGC---TG----G---AAT-G----------TC-AGG-AA--A-------------A-T-G-TT-------GAA-A--ATG-A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172648 43 -    200418 CATTCAAC---TG----A---AAT-GC---TCA-CGTT-AGG-AA--A-------------AAC-C--T-------GGA-C--ATGTA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479617 35 -  10818551 T-TTCAAG---TG----G---GAT-G----------TC-GGG-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833275 45 -   4065304 CATTCAAC----G----G---AAT-GCCGGGCAATGTG-AGG-AA--A-------------A-a-g-ct-------gaa-a--atg-a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7263 46 -     70247 CATTCAAC---TG----G---AAT-GCCAGGCAATGTG-AGG-AA--A-------------A-A-G-CT-------GAA-A--ATG-A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360422 43 -  33153633 CATTCAAC---TG----G---AAT-GC----TAATGTC-AGG-AA--A-------------AAG-C--T-------AGA-A--ATGTA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2880 28 -     21056 -----------------------T-ATC----A-TGTG-AGG-AA--A-------------A-A-G--T------TGAA-A--ATA-T
i Uropsilus_gracilis.UroGra_scaffold_46687               I 5 C 0
s Ursus_maritimus.KK499267.1                                181013 42 +   5085361 CATTCAAC---TG----G---AAT-ACC----AATGTC-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24405 42 -     30710 CATTCAAC---TG----G---CAG-GCC----AATGTT-AAG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23312 42 -    147434 CATTCAAC---TG----G---CAG-GCC----AATGTT-AAG-AA--A-------------A-A-A-CT-------GAA-A--ATG-A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75494 42 +   5488506 CGTTCAGC---TG----G---AAT-GC----TATTGTC-AGG-GA--A-------------A-A-G--T-------GGA-A--ATGTA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104154 41 -    112863 CATTAAA----TG----G---AAT-GCC----AATGTC-AGG-GA--A-------------A-A-GC-T-------GGA-A--ATA-A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173344 42 -    224448 TATTCAAC---TC----A---AAG-ACC----AATCTC-AGG-AA--A-------------A-A-G-CT-------AAA-A--ATG-A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28050 42 -     86975 CATTCAAC---TG----G---AAT-GCC----AATGTT-AGG-AA--A-------------A-A-GC-T-------GAA-A--ATG-A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       348 42 -       753 CATTCAAC---TA----G---ACT-GATG---A-TGTT-GGG-GG--A-------------A-A-G-CT-------GGA-A--GTG-A
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595              59 43 +      1812 CATTCAGC---TG----G---AAT-AC----TAATGTC-AGG-AA--A-------------AAG-C--T-------GGA-A--ATGTA
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4686 44 +     36723 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-TCTGGT-C-------AT
s Acinonyx_jubatus.LLWD01001279.1                           812078 48 +   1699592 GT-A-AGAG---T-T-TACAT-TACCAG-GA--AA-----------------GCC----TTC-AG---GG-T------G-G--------CA-CCTAGT-T-------AT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24338 46 +     63021 AC-A-CAAG---TG--CC--T--GCTGG-GA-AAA-----------------GGC----TGC-AG---GG-C------A-G--------CA-GCTGGC-T-------GT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414558 33 +  29979442 ------------------------CCGG-GA-AAA-----------------GTC----TTC-AG---GG-T------A-C--------CA-CCtagt-t-------at
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 9 C 0
s Ailurus_fulgens.LNAC01001112.1                            214857 49 +    347723 Gc-a-agag---t--ttatat-tactcg-ga-aaa-----------------gta----ttc-ag---gg-t------a-c--------tg-cctagt-t-------aa
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17280 47 -     61208 AT-A-C--A---TT--TATAT-TGCTAG-GA-CAA-----------------GGC----TAC-AG---AA-T------A-G--------CA-CCTtgt-c-------at
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47002 44 +     53615 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          42963 44 +     44087 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15588 44 -     21945 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17271 44 +     32033 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71442 45 -     84148 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---AG-T------A-G--------CA-CCCCGT-C-------AT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43681 45 -     78289 CC-A-AAAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---AG-T------A-G--------CA-CCGCGT-C-------AT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43120 45 +     55831 CG-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---AG-T------A-G--------CA-CCCCGT-C-------AT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41570 45 -     64179 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---AG-T------A-G--------CA-CCCCAT-C-------AT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23204 45 -     24835 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------A-G--------CA-CCCCGT-C-------AT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40195 45 +     45454 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------A-G--------CA-CCCCGT-C-------AT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45841 45 +     70886 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GTC----TGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8017 45 +     30854 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---AG-T------A-G--------CA-CCCCAT-C-------AT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32153 45 +     42133 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---AG-T------A-G--------CA-CCCCAT-C-------AT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584546 32 +   2318259 GC-A-AGAG---T-T-TATAC-TACTAA-CAAAAA-----------------TGC----TTC-----------------------------------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176338 50 -    412891 ATGA-AAAG---T-T-TACAT-TACCAA-GA-AAA-----------------GGC----TTC-AG---AG-T------G-G--------CA-CCGAGT-C-------AC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49643 50 -     68529 GC-T-AGAA---T-T-TATAC-CACTCT-CAAAAA-----------------TGC----TTC-AG---GG-T------C-A--------CA-CCTGGT-C-------AT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     396 45 +     17741 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CTTGGT-C-------AT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1021 45 -     15923 CC-A-GGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CTTGGT-C-------AT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1296 45 -     16391 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CTTGGT-C-------AT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                856 45 -     17186 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CTTGGT-C-------AT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15241 48 -     32367 -C-A-ACAG---TT--TACTT-TAATGG-GA-AAA-----------------TGC----TGT-GA---GG-T------A-G--------TA-CCTGGT-T-------GT
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 10 C 0
s Arctocebus_calabarensis.k141_1364444                       18801 24 -     45910 ----------------------------------------------------AAC----TAC-AG---GG-C------A-G--------TA-CCTGGT-C-------AC
i Arctocebus_calabarensis.k141_1364444                   I 20 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4617 47 -     15198 ATGA-AGAG---T-T-T-------CCAA-GA-AAA-----------------GGC----TTC-AGAAGGG-T------A-G--------CA-CCTGGT-C-------AC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273904 45 +  21539123 CC-A-AGGG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------A-G--------CA-CCCAGT-C-------AT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10071 45 +     48076 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5208 45 -     28759 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32761 45 +     44353 CC-A-AGGG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------A-G--------CA-CCCAGT-C-------AT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48131 45 -     71267 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22190 45 -     33135 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5387 49 +     11645 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-G------A-G--------GA-CCCGGT-C-------AC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5393 49 -     19611 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-G------A-G--------GA-CCCGGT-C-------AC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956219 50 -  23207421 AC-A-AGAG---T-T-TACAT-TACCAA-CAAAAA-----------------GGC----TTC-AG---GG-T------C-A--------CA-CCTggt-c-------at
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 218
s Balaenoptera_bonaerensis.DF507193.1                         3428 50 -      4711 AC-A-AGAG---T-T-TACAT-TACCAG-CAAAAA-----------------GGC----TTC-AG---GG-T------C-A--------CA-CCTggt-c-------at
i Balaenoptera_bonaerensis.DF507193.1                    C 0 I 218
s Beatragus_hunteri.BeaHun_scaffold_7278                     85537 50 +    124022 GC-A-AGAG---T-T-TATAC-TACTAA-CAAAAA-----------------TGC----TTC-AG---AG-T------C-A--------CA-CCTGGT-C-------AT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21069 50 +    288883 GC-A-GGAG---T-T-TATAC-TACTAA-CAAAAA-----------------TGC----TTA-AG---AG-T------C-A--------CA-CCGGGT-C-------AT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355455 50 +  48749331 GC-A-GGAG---T-T-TATAC-TACTAA-CAAAAA-----------------TGC----TTA-AG---AG-T------C-A--------CA-CCTGGT-C-------AT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754023 50 +   1948126 GC-A-GAAG---T-T-TATAC-TACTAA-CAAAAA-----------------TGC----TTA-AG---AG-T------C-A--------CA-CCTGGT-C-------AT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544162 50 -  45695690 GC-A-GGAG---T-T-TATAC-TACTAA-CAAAAA-----------------TGC----TTA-AG---AG-T------C-A--------CA-CCTGGT-C-------AT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529187 50 -   4408762 GC-A-GGAG---T-T-TATAC-TACTAA-CAAAAA-----------------TGC----TTC-AG---AG-T------C-A--------CA-CCTGGT-C-------AT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7078 45 +     28062 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42372 45 -     91139 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19898 45 +     95584 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19811 45 +    119600 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9378 45 +     18648 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8917 45 -     13885 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                             983 45 -      8861 CC-A-AGAG---TT--TA------CCAG-GA-AAC-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453376 45 + 189096842 CC-A-AGAG---TT--TA------CCAG-GA-AAC-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                898 45 +      8664 CC-A-AGAG---TT--TA------CCAG-GA-AAC-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630202 49 +  17673402 AC-A-AGAG---T-T-TACAT-TACCAA-CAAAAA-----------------GGC-----TC-AG---GG-T------C-A--------CA-CCTTGG-T-------AC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664488 49 +   7040546 AC-A-AGAG---T-T-TACAT-TACCAA-CAAAAA-----------------GGC-----TC-AG---GG-T------C-G--------CA-CCTTGG-C-------AC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208148 49 +   1652518 AC-A-AGAG---T-T-TACAT-TACCAA-CAAAAA-----------------GGC-----TC-AG---GG-T------C-A--------CA-CCTTGG-T-------AC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504564 49 +  60362399 AC-A-AGAG---C-T-TACAT-TACCAG-GA-AAG-----------------GTC----TTC-AG---GG-T------A-C--------TA-TCTAGT-T-------AT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8200 49 -     23171 AC-A-AGAG---C-T-TACAT-TACCAG-GA-AAG-----------------GTC----TTC-AG---GG-T------A-C--------TA-TCTAGT-T-------AT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221543 49 +   9314153 AC-A-AGAG---C-T-TACAT-TACCAG-GA-AAG-----------------GTC----TTC-AG---GG-T------A-C--------TA-TCTagt-t-------at
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614678 49 +  59632846 AC-A-AGAG---C-T-TACAT-TACCAG-GA-AAG-----------------GTC----TTC-AG---GG-T------A-C--------TA-TCTagt-t-------at
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106259 49 -  63665305 AC-A-AGAG---C-T-TACAT-TACCAG-GA-AAG-----------------GTC----TTC-AG---GG-T------A-C--------TA-TCTagt-t-------at
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408258 50 -  46296322 GC-A-AGAG---T-T-TATAC-TACTAA-CAAAAA-----------------TGC----TTC-AG---AG-T------C-A--------TA-CCTGGT-C-------AT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590531 50 +  44709034 GC-A-AGAG---T-T-TATAC-TACTAA-CAAAAA-----------------TGC----TTC-AG---AG-T------C-A--------TA-CCTGGT-C-------AT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    716 34 -      1880 AT-G-AGAG---TT--TACAT-TACTAG-AG-AAT-----------------AGC----TGC-TG---G----------------------------------------
i Capromys_pilorides.CapPil_scaffold_652123              I 13 I 26
s Carlito_syrichta.NW_007259797.1                           269461 48 +    496798 ac-a-aGAG---TT--TATAT-TACCAG-GA-AA------------------GGC----TGC-AG---GG-T------A-G--------CA-CCTGGT-C-------AT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                553 53 -      1021 ATGA-AGAG---T-T-TACAT-TACCCA-GA-AAA-----------------GGC----TTC-AGAAGGG-T------A-G--------CA-CCTGGT-C-------AC
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26883 27 -     39886 AC-A-AGAG---TT--TATAT-TACTGG-AA-AGA-----------------GG-------------------------------------------------------
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 16
s Catagonus_wagneri.CatWag_scaffold_2839                     78742 50 -    217609 AC-A-AGAG---T-T-TACAT-TACCAA-CAAAAA-----------------AGC----TTC-AG---GG-T------C-A--------CA-CCTGAA-C-------AT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995598 47 +  23392119 AT-G---AG---TT--TACAT-TACTGG-GA-AAT-----------------GGC----TGC-TG---TT-T------A-A--------AA-CCTGAT-C-------AT
i Cavia_aperea.AVPZ01000300.1                            I 13 C 0
s Cavia_porcellus.DS562891.1                               4999040 47 +  23407841 GT-G---TG---TT--TACAT-TACTGG-GA-AAT-----------------GGC----TGC-TG---TT-T------A-A--------AA-CCTGAT-C-------AT
i Cavia_porcellus.DS562891.1                             I 13 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62121 47 -     66877 GT-G---TG---TT--TACAT-TACTGG-GA-AAT-----------------GGC----TGC-TG---TT-T------A-A--------AA-CCTGAT-C-------AT
i Cavia_tschudii.CavTsc_scaffold_23560                   I 13 C 0
s Cebuella_niveiventris.k141_592277                           4296 45 -     12580 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42354 45 +     53515 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370285 45 -  26074798 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7174 45 -     34880 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66269 45 -     89041 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1390 48 -      5494 AC-A-AGAG---TT--Tatat-taccag-ga-aa------------------ggc----tgc-ag---gg-t------a-g--------ca-cctggt-c-------at
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491357 48 -  27778364 AC-A-AGAG---T-T-TACGT-TACCAA-GA-AAA-----------------AGT-----TC-AG---AG-T------A-G--------CA-CTTGGT-C-------AT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18190 48 +     27315 AC-A-AGAG---T-T-TACGT-TACCAA-GA-AAA-----------------AGT-----TC-AG---AG-T------A-G--------CA-CTTGGT-C-------AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140185 44 -   4669795 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43927 44 +     47900 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43752 44 -     44860 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43740 44 -    148725 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25917 44 -     40656 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5883 44 +     20796 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11000 44 -     17524 CC-A-AGAG---TT--TA------CCAG-GA-GAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26722 44 -     34525 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10503 44 -     25376 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363099 44 -  39242232 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268815 44 +  21565898 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31189 44 -     45857 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercopithecus_neglectus.k141_858615                    I 40 C 0
s Cercopithecus_nictitans.k141_2995370                       26088 44 -     32606 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2247 44 +      8499 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24645 44 +     70610 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21614 44 +     36323 CC-A-AGAG---TT--TA------CCAG-GA-GAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            11991 48 -     19938 -C-A-AGAG---CT--TAC-TGTACCAG-GA-AAA-----------------GCC----TGT-CA---GG-T------A-G--------GA-CCTGGT-C-------TT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29799 49 -     33796 AC-A-AGGG---TT--TGCAT-TAGTAG-GA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4316 49 -     15404 AC-A-AGGG---TT--TGCAT-TAGTAG-GA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8176 29 -     32913 CC-A-AGCA---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA--------------------------------------------
i Cheracebus_lucifer.k141_2312002                        C 0 I 11
s Cheracebus_lugens.k141_1179667                             18589 29 -     40346 CC-A-AGCA---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA--------------------------------------------
i Cheracebus_lugens.k141_1179667                         C 0 I 11
s Cheracebus_regulus.k141_471822                             18844 29 +    216457 CC-A-AGCA---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA--------------------------------------------
i Cheracebus_regulus.k141_471822                         C 0 I 11
s Cheracebus_torquatus.k141_890198                           18637 29 +     39636 CC-A-AGCA---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA--------------------------------------------
i Cheracebus_torquatus.k141_890198                       C 0 I 11
s Chinchilla_lanigera.JH722012.1                           1238048 49 -   2543920 AT-G-AGAG---TT--TATAT-TACTGG-GA-AAT-----------------GGC----AGC-TG---GG-T------A-A--------AA-TCTGAT-C-------AT
i Chinchilla_lanigera.JH722012.1                         I 13 C 0
s Chiropotes_albinasus.k141_1946120                           3226 45 +      5346 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41709 45 -    112038 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------A-G--------CA-CCCAGT-C-------AT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7280 45 +     34062 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------A-G--------CA-CCCAGT-C-------AT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342505 44 +  18827391 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9052 44 -     44032 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303829 44 - 135778131 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 13962 48 +     15858 AC-G-ATAG---TT--TGTAG-TCCCAG-GA-AAA------------------CC----TGT-TG---GG-T------A-G--------CA-CCTGGT-C-------AT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605538 48 -    839153 AC-G-ATAG---TT--TGTAG-TCCCAG-GA-AAA------------------CC----TGT-TG---GG-T------A-G--------CA-CCTGGT-C-------AT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408258 44 -   2368649 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Colobus_angolensis.KN981557.1                          I 6 C 0
s Colobus_guereza.LG01                                      378133 44 - 200372422 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Colobus_guereza.LG01                                   I 6 C 0
s Colobus_polykomos.k141_906115                               1682 44 -     84244 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Colobus_polykomos.k141_906115                          I 6 C 0
s Condylura_cristata.JH655891.1                           35806372 47 +  53390261 aC-A-AG-T---T----ACAT-TACCGA-GA-AAT-----------------GGC----TTC-AG---GG-T------G-G--------TA-CCTGGCTC-------AT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          1960 49 -      8242 AT-A-AGAG---T-T-TACAT-TACCAA-AG-AAA-----------------GGC----TGT-AG---GG-T------A-G--------CA-CCTGGT-C-------AA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43525 11 -     83289 -----------------------------------------------------------------------------------------CA-CCTGGC-C-------AG
i Cricetomys_gambianus.CriGam_scaffold_14425             I 14 C 0
s Cricetulus_griseus.LT883664.1                          213113917 54 - 224834208 AC-A-TGAG---TT--TCTAG-CACTGG-GA-AAA-----------------GGC----TGT-AG---GA-T------A-G--------CA-CCTGGT-CATA--GCCT
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_77846               6630 50 +     12657 T--A-AGAGAGCT---TATTT-TACCAA-GA-AAA-----------------GGC----TAA-AG---GG-T------C-A--------CA-TTTAGT-C-------AT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3471 48 +     87169 AT-T-AGAG---T-T-TATAT-TACTTG-GA--AA-----------------GTC----TTC-AG---GG-T------G-T--------CA-CCtagt-t-------at
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644194 40 -   1526836 ----------------CACAT-CTCTGG-GA-AAA-----------------GAC----TGC-AG---GA-T------A-G--------CA-CCCAGT-T-------CT
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 22 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17505 49 +     50838 AT-G-AGAA---TT--TACAT-TACTGG-GG-AAT-----------------GGC----CAC-TG---GA-T------A-A--------AA-CCTGAT-C-------AT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 13 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3482 50 +     36344 AT-G-AGAG-G-TT--TACAT-TACTGG-GA-AAT-----------------GGC----TGC-TG---GG-T------A-A--------AA-CCTGAT-C-------AT
i Cuniculus_paca.CunPac_flattened_line_7025              I 13 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27281 49 +     75252 AT-A-AGAG---TT--TACAT-TAGTGG-GA-AAT-----------------GGC----TGC-TG---GG-T------A-A--------AA-CCTGAT-C-------AT
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 13 C 0
s Dasypus_novemcinctus.JH564415.1                          2109335 49 -   2246927 AC-A-AGAG---TT--TAC-TGTCCCAG-GA-AAA-----------------GCC----TGT-TG---GG-T------A-G--------CA-CCTGGT-C-------AT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291733 49 +  12879189 AC-A-AGGG---TT--TACAC-TACTAG-GA-AAA-----------------GGC----TGC-AG---GA-C------A-G--------GA-CCTGGT-C-------AC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18624548 50 -  35494412 AC-A-AGAG---T-T-TACAT-TACCGA-CAAAAA-----------------GGC----TTC-AG---GG-T------C-A--------AA-CCTgct-c-------at
i Delphinapterus_leucas.KZ290073.1                       C 0 I 421
s Desmodus_rotundus.KZ672289.1                            11864359 50 -  20541912 ATGA-AGAG---T-T-TACAT-TACCAA-GA-AAA-----------------GGC----TTC-AG---GG-T------A-G--------CA-CCCGAT-C-------AC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663646 48 -   1390856 AT-G-AGAG---T-T-TATGT-TACCAA-GA-AAA-----------------GGT-----TC-AG---AA-T------A-G--------CA-CTTGGT-C-------AT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138434 48 -    198055 AC-A-AGAG---T-T-TACGT-TACCAA-GA-AAA-----------------GGT-----TC-AG---AG-T------A-G--------CA-CTTGGT-C-------AT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98038 49 -    115145 AT-G-AGAG---TT--TATAT-TACTGG-GA-AAT-----------------GGC----TGC-TG---GG-T------A-A--------AA-CCTGAt-c-------tt
i Dinomys_branickii.DinBra_scaffold_10381                I 13 C 0
s Dipodomys_ordii.KN672350.1                              18949660 51 -  37912305 AC-A-AGAG---TT--TACAT-TACTGG-GG-AAA-----------------GGT-T--TGC-TG---GA-T------AAA--------CA-CCTGAT-C-------AT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4595 51 -     10735 AC-A-AGAG---TT--TACAT-TACTGG-GG-AAA-----------------GGT-T--TGC-TG---GA-T------AAA--------CA-CCTGGT-C-------AT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9542 32 +     14636 AT-G-AGAG---TT--TACAT-TACTGG-AA-AAT-----------------GGC----TGC-T---------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             I 13 I 6
s Echinops_telfairi.JH980293.1                            62854111 44 - 111700974 AC-A-ATTG---CT--TA--T--A-CAG-GG-GGA-----------------GTC----TA--CA---AG-T------A-G--------CA-ACCCAT-C-------AT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5421 49 +     19438 AC-A-AGAG---T-T-TATAA-TACCAA-GA-AAA-----------------ATC----TTC-AG---GG-T------A-G--------CA-CCTGAT-T-------AG
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238915 49 -    607251 GC-A-AGAG---T-T-TATAC-T-CTGA-CAAAAA-----------------TGC----TTC-AG---TG-T------C-A--------CA-CCTGGT-C-------AT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107719 49 -  10337057 ag-a-acaa---tg--tatac-tTCCAG-GA-ACA-----------------GAA----TGC-CA---AG-T------A-A--------CA-CCCTGC-C-------AT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30198 54 +    110024 AC-A-TGTT---TT--TCTAT-TACTGG-GA-AAA-----------------GGC----TGT-AG---GG-T------A-G--------CA-Cctggt-c-tcctc-tc
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01026522.1                           12185 54 +     18970 AC-A-TGAT---TT--TCTAT-TACTGG-GA-AAA-----------------GGC----TGT-AG---GG-T------A-G--------CA-CCTggt-c-ccccc-tc
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               24915284 49 +  41312741 GC-A-AGAG---T-T-TACAT-GACTGG-GA-AAA-----------------ATC----TTC-AG---GG-T------A-C--------TA-CCTAGT-T-------AT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12577991 49 +  14770903 AC-A-AGAG---T--ATACAT-TACCAA-GA-AAA-----------------GGC----TTC-AG---GG-T------A-G--------CA-TCTGGT-C-------AG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040530 32 -   4378816 ------------------------CCAA-GA-AAA-----------------GGC-----TC-AG---GG-T------A-G--------CA-GCTGGT-T-------AT
i Equus_asinus.JREZ01000139.1                            I 11 C 0
s Equus_caballus.CM000403.2                               21374454 32 +  39960074 ------------------------CCAA-GA-AAA-----------------GGC-----TC-AG---GG-T------A-G--------CA-GCTGGT-T-------AT
i Equus_caballus.CM000403.2                              I 11 C 0
s Equus_przewalskii.KK951119.1                              411240 32 -    498745 ------------------------CCAA-GA-AAA-----------------GGC-----TC-AG---GG-T------A-G--------CA-GCTGGT-T-------AT
i Equus_przewalskii.KK951119.1                           I 11 C 0
s Erinaceus_europaeus.JH835339.1                           3665300 39 +   7059049 ------------------------CTAA-GA-AAA-----------------GAC----TTC-AG---GG-TAACAGTA-G--------CA-TCTAGT-C-------TG
i Erinaceus_europaeus.JH835339.1                         I 10 C 0
s Erythrocebus_patas.Contig38                               262032 44 +  21539334 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64098 50 -    133382 AC-A-AGAG---T-T-TACAT-TACCAA-CAAAAA-----------------GGC----TTC-AG---GG-T------C-A--------CA-CCTGGT-C-------AT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 217
s Eubalaena_japonica.EubJap_flattened_line_118172             4315 50 +      7672 AC-A-AGAG---T-T-TACAT-TACCAA-CAAAAA-----------------GGC----TTC-AG---GG-T------C-A--------CA-CCTGGT-C-------AT
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 I 213
s Eulemur_albifrons.k141_51491                               13930 49 -     24895 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41639 49 -     70999 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85601 49 +    112731 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42170 49 +     68309 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52496 49 -     65740 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23125 49 -     75513 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47322 49 -     97555 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4047 49 +     30972 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41767 49 -     52037 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58169 49 -    111500 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186245987 48 - 206538554 GT-A-AGAG---T-T-TACAT-TACCAG-GA--AA-----------------GCA----TTC-AG---GG-T------G-G--------CA-CCTAGT-T-------GT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115773 48 - 205367284 GT-A-AGAG---T-T-TACAT-TACCAG-GA--AA-----------------GCA----TTC-AG---GG-T------G-G--------CA-CCTAGT-T-------GT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26874 48 -     30238 GT-A-AGAG---T-T-TACAT-TACCAG-GA--AA-----------------GCC----TTC-AG---GG-T------G-G--------CA-CCTAGT-T-------AT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124218 23 -    137831 ----------------------------------------------------GGC----TAC-AG---GG-C------A-G--------TG-C-TGGT-C-------AC
i Galago_moholi.ctg3793                                  I 20 C 0
s Galago_senegalensis.k141_991736                             7763 23 +     22493 ----------------------------------------------------GGC----TAC-AG---GG-C------A-G--------TG-C-TGGT-C-------AC
i Galago_senegalensis.k141_991736                        I 20 C 0
s Galagoides_demidoff.k141_561628                            19829 24 -     32986 ----------------------------------------------------GGC----TAT-AG---GG-C------A-G--------TG-CCTGGT-C-------AC
i Galagoides_demidoff.k141_561628                        I 20 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 329 49 -     28519 AC-A-AGAG---TT--TACAT-TACGAG-GA-AAA-----------------GGC----TGC-GG---GC-T------A-G--------CA-CCTGGT-C-------AT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90607 50 -     95226 GC-A-AGAG---T-T-TATAC-TACTCA-CAAAAA-----------------TGC----TTC-AG---GG-T------C-A--------CA-CCTGGT-C-------AT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33679 48 -     36801 AC-A-AA-G---TT--TACAT-TACTGG-GA-AAA-----------------GGC----TGC-AG---GG-T------A-G--------CA-CCTGGT-C-------AT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               4988 44 -      8343 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254000 44 - 186649187 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1170 48 -     78134 AC-A-AA-G---TT--TACGT-TAGTGG-GA-AAA-----------------GGC----TGC-AG---GG-T------A-G--------CA-CCTGGT-C-------AT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13855 49 -     40692 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGT----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35257 49 +     49394 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGT----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60125 49 -     66874 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGT----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          8999 49 -     42923 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGT----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         15999 49 -     53142 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGT----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                29959 47 -    327341 AT-T-AGAG---T---TACAT-TACTCG-GA--AA-----------------GTC----TTC-AG---GG-T------G-G--------CA-CCTAGT-T-------AT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8365 50 +     48891 GC-A-AGAG---T-T-TATAC-TACTAA-CAAAAA-----------------TGC----TTC-AG---AG-T------T-A--------CA-CCTGGT-C-------AT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6282 33 +      6687 ------------------------CCAG-GA-AAC-----------------AGT----TGC-CA---GA-T------G-G--------CA-CCAGGT-C-------AG
i Heterohyrax_brucei.HetBruBak_scaffold_128297           I 9 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6808 50 -     36432 AC-A-AGAG---T-T-TACAT-TACCAA-CAAAAA-----------------GGC----TTC-AG---GG-T------C-A--------CA-CCTGGT-C-------AT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                173 49 -      2730 AC-A-AGAG---C-T-TACAT-TACCAA-GA-AAA-----------------AGC----TTC-AG---GG-T------A-G--------TA-CCTGGT-C-------AG
i Hipposideros_galeritus.HipGal_scaffold_164997          N 0 C 0
s Hoolock_leuconedys.ctg274                                    142008 44 -    630532 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68877 48 +     83186 AT-A-AGAT---T--GTACAT-TACTAG-GA--AG-----------------GTC----TTC-AG---GG-T------G-G--------CA-CCTAGT-T-------AT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71003 49 +    143317 AT-G-AGAG---TT--TACAT-TACTGG-GA-AAT-----------------GGC----TGC-TG---GG-T------A-A--------AA-CCTGAT-C-------AT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 13 C 0
s Hylobates_agilis.k141_1155965                               5043 44 +     12352 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12227 44 +     55766 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051825 44 + 191637585 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800703 44 +  11177569 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3654 49 -    135385 AA-G-AGAA---TT--TACAT-TGCTGG-GA-AAT-----------------GGC----TGC-TG---GG-T------A-C--------CA-CCTGAT-C-------AT
i Hystrix_cristata.HysCri_scaffold_5660                  I 13 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386017 49 +   7955117 AC-A-ACAG---TT--TATAT-TACTGG-GA-AAA-----------------GGC----TAT-GA---GA-T------T-G--------CA-CCTGCT-T-------AT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1509 49 +     11955 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGc-ag---ga-g------a-g--------ga-cctggt-c-------ac
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2335 50 -     16823 AC-A-AGAG---T-T-TACAT-TACCAA-CAAAAA-----------------GGC----TTC-AG---GG-T------C-A--------AA-CCTGGT-C-------AT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 445
s Jaculus_jaculus.JH725527.1                               1238828 10 +   9596543 ------------------------------------------------------------------------------------------c-ccaggt-c-------at
i Jaculus_jaculus.JH725527.1                             I 10 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 64814 50 -     97402 GC-A-AGAG---T-T-TACAT-TACCAA-CTAAAA-----------------GAC----TTC-AG---GG-T------C-A--------AA-CCTGGT-C-------AT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 214
s Lagothrix_lagothricha.k141_246028                          42448 45 +    110728 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    31092 49 -     49555 AC-A-AGGG---T--ATACAT-TACCAA-GA-AAA-----------------GGC----TTC-AG---GG-G------A-G--------CA-TCTGGT-C-------AG
i Lasiurus_borealis.LasBor_scaffold_26245                I 827 I 266
s Lemur_catta.scaffold_24                                 14758648 49 +  30322482 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3362 44 -     13097 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CC-GGT-C-------AC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3116 44 +      5940 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CC-GGT-C-------AC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2946 44 -      5717 CC-A-AGAG---TT--TG------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CC-GGT-C-------AC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9321 45 -     11567 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCTGGT-C-------AT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10702 45 -     12945 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8177 48 +     29618 -C-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TTC-AG---GA-T------A-G--------GA-CCTGAT-C-------AC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8173 48 +     31569 -C-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TTC-AG---GA-T------A-G--------GA-CCTGAT-C-------AC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8183 49 +     24756 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TTC-AG---GA-T------A-G--------GA-CCTGAT-C-------AC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8183 48 +     16388 -C-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TTC-AG---GA-T------A-G--------GA-CCTGAT-C-------AC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812698 49 -   3914936 GC-A-AGAG---T-T-TACAT-TACTGG-GA-AAA-----------------GTC----TTC-AG---GA-T------A-C--------TA-CCtagt-t-------at
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17035 33 +     24238 ------------------------CCAT-GA-AAA-----------------GCC----TGC-AT---GG-T------A-G--------TA-CTTGGT-T-------AT
i Lepus_americanus.LepAme_scaffold_56121                 I 12 C 0
s Lipotes_vexillifer.KE559953.1                             333855 50 +    662738 AC-A-AGAG---T-T-TACAT-TACCAA-CAAAAA-----------------GGC----TTC-AG---TG-T------C-A--------AA-CCTggt-c-------at
i Lipotes_vexillifer.KE559953.1                          C 0 I 459
s Lophocebus_aterrimus.ctg367                               333070 44 -   1826925 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9782 24 +     19643 ----------------------------------------------------GGC----TAC-AG---GG-C------A-G--------CA-CCTGGT-C-------AC
i Loris_lydekkerianus.k141_2031736                       I 20 C 0
s Loris_tardigradus.ctg83                                  5043439 24 -   6120653 ----------------------------------------------------GGC----TAC-AG---GG-C------A-G--------CA-CCTGGt-c-------ac
i Loris_tardigradus.ctg83                                I 20 C 0
s Loxodonta_africana.GL010049.1                           39080193 49 +  43346337 GC-AAACAG---TT--CACAC-T-CCAG-GA-AAA-----------------GGC----TGC-CA---GG-T------A-G--------CA-CCTGGC-C-------AG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613833 49 +  59628241 AC-A-AGAG---C-T-TACAT-TACCAG-GA-AAG-----------------GTC----TTC-AG---GG-T------A-C--------TA-TCtagt-t-------at
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44454 44 -     61512 CC-A-AGCG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372116 44 -  60120075 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24379 44 +     30207 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21482 44 -     24934 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24332 44 +     30527 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35508 44 -     50087 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45252 44 +     51645 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414455 43 - 187317192 CC-A-AGAG---TT--TA-------CAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398685 44 +  25927173 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47857 44 -     62418 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  395 44 +     14901 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44329 44 +     59329 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270237 44 +    668171 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  513 44 +      1732 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2035 44 +     17132 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222384 49 -    270270 AC-A-AGAG---T-T-TATAA-TGCCAA-GA-AAA-----------------ATC----TTC-AG---GG-T------A-G--------CA-CCTGGT-C-------AG
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321534 44 +  24302211 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356366 44 -    752769 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672717 49 -    737560 ac-a-gGAG---T-T-TATAT-TGCCAA-GG-AAA-----------------GGC----TTC-AG---GG-T------A-G--------CA-ACTGTT-C-------AT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220001 49 +    317179 ac-a-gGAG---T-T-TATAT-TGCCAA-GG-AAA-----------------GGC----TTC-AG---GG-T------A-G--------CA-ACTGGT-C-------AT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500237 49 +  40650429 AC-A-ACAG---TG--TATAT-TACTGG-GA-AAA-----------------GGC----TAT-GA---GA-T------T-G--------CA-CCTGCT-T-------AT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149548 51 +    207569 GA-A-AGAG---T-T-TACAT-TACCAA-TA-AAA-----------------GGT----TTA-aa---ggac------a-g------cc-a-gccagc-c-------ag
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25388 49 -     74585 GC-A-AGAG---T-T-TACAT-GACTGG-GA-CAG-----------------GTC----TTC-AG---GG-T------A-C--------TA-CCTAGT-T-------AT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49343 49 -    140813 CC-A-TGAG---TT--TCTAT-AACTGG-AA-AAA-----------------GGC----TGC-AG---GG-C------A-G--------CA-GCTGGC-T-------GT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428428 54 +  29670104 AC-A-AGAG---TT--TCTAG-CACTGG-GA-AAA-----------------GGT----TGT-AG---GG-T------A-G--------CA-CCTGGT-CTTA--GCCc
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_6114                     80399 50 +     93471 AC-A-AGAG---T-T-TACGT-TACCAA-CAAAAA-----------------GGC----TTC-AG---GG-T------C-A--------AA-CCTGGT-C-------AT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 214
s Mico_argentatus.k141_582562                                 9487 45 +     17804 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                               9989 45 -     12984 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18303 45 -     26561 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCTGGT-C-------AT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983786 49 +  93316391 ac-a-aGGG---TT--TACAT-TATCAG-TA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGAT-C-------AT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45158 43 +    145209 AC-A-ATTG---CT--TACA-----TAG-GA-AGC-----------------GTC-----A--CA---AG-A------A-A--------CA-ACCCAT-C-------AT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184303 51 +    200668 ATGA-AGAG---T-TTTATAT-TACCAA-GA-AAT-----------------GGC----TTC-AG---GG-T------A-A--------CA-CCTGGT-C-------AC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961646 54 +  27267610 AC-A-TGAT---TT--TCTGT-TACTGG-GA-AAA-----------------GGC----TGT-AT---GG-T------T-G--------TA-CCTGGT-C-TCccg-tc
i Microtus_ochrogaster.CM001695.1                        C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    6362408 49 -   8254450 AC-A-AGAA---T-T-TACCT-TACCAA-GA-AAA-----------------GGC----TTC-AG---GG-T------A-A--------CA-CCTGGT-C-------AG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41307 49 -     48117 AC-A-AGAA---T-T-TACCT-TACCAA-GA-AAA-----------------GGC----TTC-AG---GG-T------A-A--------CA-CCTGGT-C-------AG
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 12 C 0
s Miopithecus_ogouensis.k141_1534655                         21542 44 -     27822 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7705 49 +     27589 GC-A-AGAG---T-T-TACAT-TACTGG-GA-AAA-----------------GTC----TTC-AG---GA-T------A-C--------TA-CCTAGT-T-------AT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51575 49 -     62432 AC-A-AGAC---TT--TACAT-TACCAG-TA-AAA-----------------GTC----TGC-AG---GA-T------A-G--------GA-CCTGAT-C-------AC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352291 50 +    437263 AC-A-AGAG---T-T-TACAT-TACCGA-CAAAAA-----------------GGC----TTC-AG---GG-T------C-A--------AA-CCTGGT-C-------AT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 421
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178470 49 +    366855 AT-A-AGAG---T-T-TACTT-TACCAA-GA-AAA-----------------GGC----TTC-AG---GG-T------A-A--------CA-CCTGGT-C-------AC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24726 50 -     82753 GC-A-AGAG---T-T-TATAC-TACTAA-CAAAAA-----------------TGC----TTC-AG---GG-T------C-A--------CA-CCTGGC-C-------AT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17711 47 -     63510 AT-T-AGAG---T---TACAT-TACTCG-GA--AA-----------------GTC----TTC-AG---GG-T------G-G--------CA-CCTAGT-T-------AT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38349 49 +     47283 AC-A-AGAG---T--ATACAT-TACCAA-GA-AAA-----------------GGC----TTC-AG---GG-T------A-G--------CA-CCTGGT-C-------AG
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592378 49 + 120012414 AC-A-TGAG---TT--TCTAT-TACTGG-GA-AAA-----------------GGC----TGC-AG---GG-T------A-G--------CA-CCTGGT-c-------at
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686763 49 + 129401213 AC-A-TGAG---TT--TCTAT-TACTGG-GA-AAA-----------------GGC----TGC-AG---GG-T------A-G--------CA-CCTGGT-C-------at
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216620 57 +  89631738 GT-A-TGAG---TT--TCTAT-TACTGG-GA-AAA-----------------GGC----TGC-AA---GC-T------A-GCAGGCTCGCA-CCTGGT-C-------AT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39496059 49 + 130317789 AC-A-TGAG---TT--TCTAT-TACTGG-GA-AAA-----------------GGC----TGC-AG---GG-T------A-A--------CA-CCTGGT-C-------at
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82508 48 -     86153 AC-A-AA-T---TT--TACAT-TACTGG-GA-AAA-----------------GGC----TGC-AG---GG-T------A-G--------AA-CCTGGT-C-------AT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354316 49 +  14710649 GC-A-AGAG---T-T-TACAT-GACTGG-GA-AAA-----------------GTC----TTC-GG---GG-T------A-C--------TA-CCTAGT-A-------AT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792599 49 +  10118263 AC-A-AGAG---T--ATACAT-TACCAA-GA-AAA-----------------GAC----TTC-AG---GT-T------A-G--------CA-CCTGGT-C-------AG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386759 49 +   6019432 AC-A-AGAG---T--ATACAT-TACCAA-GA-AAA-----------------GAC----TTC-AG---GT-T------A-G--------CA-CCTGGT-C-------AG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382578 49 +   4330536 AC-A-AGAG---T--ATACAT-TACCAA-GA-AAA-----------------GAC----TTC-AG---GT-T------A-G--------CA-CCTGGT-C-------AG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1406 49 +     18357 AC-A-AGAG---T--ATACAT-TACCAA-GA-AAA-----------------GAC----TTC-AG---GT-T------A-G--------CA-CCTGGT-C-------AG
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118929 48 +    130748 AC-A-AGAG---TC--TACAT--ACCAG-GA-AGG-----------------GCC----TGT-CA---GG-T------A-G--------TG-CTCGGT-C-------AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945411 49 +   3037898 CT-G-TGAG---TT--TCTAT-TACTAG-GA-AAA-----------------AGC----TGC-AG---GC-T------A-G--------CA-CCTGCT-C-------AT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28193 31 +     34575 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Nasalis_larvatus.k141_1350636                          C 0 I 3
s Neomonachus_schauinslandi.NINY01007730.1                11468300 49 -  31847680 GC-A-AGAG---T-T-TACAT-TACTGG-GA-AAA-----------------GTC----TTC-AG---GG-T------A-C--------TA-CCTagt-t-------at
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226460 50 -   7148211 AC-A-AGAG---T--CTACAT-TACCGA-CAAAAA-----------------GGC----TTC-AG---GG-T------C-A--------AA-CCTGgt-c-------at
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 422
s Noctilio_leporinus.NocLep_scaffold_7894                   127430 47 -    149072 AT-A-AGCG---T---TATAT-TACCAA-GA-AAA-----------------GGC----TTT-T----GG-T------A-G--------TG-CCTGGT-C-------AC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52935 44 -    132029 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9030 44 -     16345 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14915 44 +     22201 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413136 44 -  22158432 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25313 44 -     54323 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197426 49 +   9404916 AC-A-AGAG---C-T-TACAT-TACCAG-GA-AAA-----------------GTC----TTC-AG---GG-T------A-C--------TA-TCtagt-t-------at
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635809 24 + 196305487 ----------------------------------------------------GGC----TAC-AG---GG-C------A-G--------CA-CCTGGT-C-------AC
i Nycticebus_bengalensis.LG01                            I 20 C 0
s Nycticebus_coucang.k141_3846325                             2567 24 -      3937 ----------------------------------------------------GGC----TAC-AG---GG-C------A-G--------CA-CCTGGT-C-------AC
i Nycticebus_coucang.k141_3846325                        I 20 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564074 24 - 199412804 ----------------------------------------------------GGC----TAC-AG---GG-C------A-G--------CA-CCTGGT-C-------AC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 20 C 0
s Ochotona_princeps.JH802162.1                             2550399 32 -   3988456 ------------------------ACAT-GA-AAA-----------------GGC----TAC-AT---G--C------A-G--------TA-CATGGT-T-------AT
i Ochotona_princeps.JH802162.1                           I 10 C 0
s Octodon_degus.JH651603.1                                11054312 34 -  11899542 AT-C-AGAA---TT--TACAT-TACTGA-GG-AAT-----------------GGC----CAC-TG---G----------------------------------------
i Octodon_degus.JH651603.1                               I 13 C 0
s Odobenus_rosmarus.KB229312.1                             1450897 49 +   2017862 GC-A-AGAG---T-T-TACAT-TACTGG-GA-AAA-----------------GTC----TTC-AG---GG-T------A-C--------TA-CCtagt-t-------at
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435491 50 -    630418 GC-A-AGAG---T-T-TATAC-TACTAA-CAAAAG-----------------TGC----TTC-AG---AG-T------C-A--------CA-ACTGGT-C-------AT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13491 50 +    150152 GC-A-AGAG---T-T-TATAT-TACTCA-CAAAAA-----------------TGC----TTC-AG---GG-T------C-A--------CA-CCTGGT-C-------AT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    91981 54 -    140218 AC-A-TGAT---TT--TCTAT-TACTGG-GA-AAA-----------------GGC----TGT-AG---GG-T------A-G--------CA-CCTGGT-CAT-CTC-TC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_28377                    2878 49 -     41509 AC-A-TGAG---TT--TCTAT-TACTGG-AA-AAA-----------------TGC----TGT-AG---GA-T------A-G--------CA-CCTGGT-C-------CC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 1
s Orcinus_orca.KB316932.1                                  8095730 51 +  10937097 AC-A-AGAG---T-TTTACAT-TACCAA-CAAAAA-----------------GGC----TTC-AG---GG-T------C-A--------AA-CCTggt-c-------at
i Orcinus_orca.KB316932.1                                C 0 I 435
s Orycteropus_afer.OryAfe_flattened_line_171931              12832 49 -     14239 AC-A-ACAG---TT--TACAC-TTCCAG-GA-AAA-----------------GGT----TGC-CA---GG-T------A-G--------CA-CACAGT-C-------AT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102872 33 - 174332312 ------------------------CCTT-GA-AAA-----------------GCC----TGC-AT---GG-T------A-G--------TA-CTTGGT-T-------AT
i Oryctolagus_cuniculus.CM000791.1                       I 13 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38473 49 +    559221 AC-A-AGAG---C-T-TACAT-TACCAG-GA-AAA-----------------GTC----TTC-AG---GG-T------A-C--------TA-TCTagt-t-------at
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39378 24 -     51505 ----------------------------------------------------GGC----TAC-AG---GG-C------A-G--------TG-CCTGGT-C-------AC
i Otolemur_crassicaudatus.k141_649260                    I 20 C 0
s Otolemur_garnettii.GL873799.1                             352381 24 +   1103335 ----------------------------------------------------GGC----TAC-AG---GA-C------A-G--------TG-CCTGGT-C-------AC
i Otolemur_garnettii.GL873799.1                          I 20 C 0
s Ovis_aries.CM001607.2                                   26403485 50 -  44047080 GC-A-AGAG---T-T-TATAC-TACTAA-CAAAAA-----------------TGC----TTC-AG---AG-T------C-A--------CA-CCTGGT-C-------AT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4004 50 +     17875 GC-A-AGAG---T-T-TATAC-TACTAA-CAAAAA-----------------TGC----TTC-AG---AG-T------C-A--------CA-CCTGGT-C-------AT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             11620 48 -     26668 CC-A-AGAG---TTTATA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-TAA----A-G--------CA-TCCGGT-C-------AC
i Pan_troglodytes.NBAG03003091.1                         C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23699 48 -    230217 GT-A-AGAG---T-T-TACAT-TACCAG-GA--AA-----------------GCC----TTC-AG---GG-T------G-G--------CA-CCTAGT-C-------AT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461025 48 -  18783137 gt-A-AGAG---T-T-TACAT-TACCAG-GA--AA-----------------GCC----TTC-AG---GG-T------G-G--------CA-CCTAGT-C-------AT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971682 48 +   8748460 gt-A-AGAG---T-T-TACAT-TACCAG-GA--AA-----------------GCC----TTC-AG---GG-T------G-G--------CA-CCTAGT-C-------AT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614923 50 +   2937107 GC-A-AGAG---T-T-TATAC-TACTAA-CAAAAA-----------------TGC----TTC-AG---AG-T------C-A--------CA-CCTGGT-C-------AT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242367 44 - 183742232 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8829 44 +     21308 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291403 44 -  20919399 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21477 44 -     27687 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14623 44 +     16796 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21434 44 -     23640 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14294 48 +     78924 AT-A-AGAG---T-T-TACAT-TACCAG-AG--AA-----------------GTC----TTC-AG---GG-T------G-G--------CA-CCTAGT-T-------AT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25588 24 +     31479 ----------------------------------------------------GAC----TGC-AG---GG-C------A-G--------TG-CCTGGT-C-------AC
i Perodicticus_ibeanus.k141_1921260                      I 20 C 0
s Perodicticus_potto.k141_1854441                            17957 24 -     24908 ----------------------------------------------------GAC----TGC-AG---GG-C------A-G--------TG-CCCGGT-C-------AC
i Perodicticus_potto.k141_1854441                        I 20 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005         992 50 +      9367 AT-A-AGAG---TT--TACAT-TATTGG-GG-AAA-----------------AGG-T--TGC-TG---GA-T------A-G--------CA-CCTGGT-C-------AT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246073 49 +  18517816 AC-A-TGAG---TT--TCTAT-TACTGG-GA-AAA-----------------CGC----TGT-AG---GG-T------A-G--------CA-CCTGGT-C-------CC
i Peromyscus_maniculatus.KI615324.1                      C 0 I 4
s Phocoena_phocoena.PhoPho_flattened_line_46867              11585 50 -     15039 AC-A-AGAG---T--CTACAT-TACCGA-CAAAAA-----------------GGC----TTC-AG---GG-T------C-A--------AA-CCTGGT-C-------AT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 I 423
s Piliocolobus_badius.k141_2704958                            1641 44 +     55023 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1191 44 -     89929 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1780 44 +     40849 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253444 44 +  14605196 cC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2931 49 +     22231 AC-A-AGAG---T--ATATAT-TACCAA-GA-AAA-----------------GGC----CTC-AG---GG-C------A-G--------CA-CCTGGT-C-------AC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64085 45 +    207309 CC-A-AGAG---TT--TA------GCAG-GA-AAA-----------------GGC----GGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5178 45 -     25401 CC-A-AGAG---TT--TA------GCAG-GA-AAA-----------------GGC----GGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30921 45 +     58159 CC-A-AGAG---TT--TA------GCAG-GA-AAA-----------------GGC----GGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31197 45 +     63561 CC-A-AGAG---TT--TA------GCAG-GA-AAA-----------------GGC----GGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           30957 45 +     51148 CC-A-AGAG---TT--TA------GCAG-GA-AAA-----------------GGC----GGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555927 45 -   4542175 CC-A-AGAG---TT--TA------GCAG-GA-AAA-----------------GGC----GGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30941 45 +     51125 CC-A-AGAG---TT--TA------GCAG-GA-AAA-----------------GGC----GGCAAA---GG-T------A-G--------CA-CCCGGT-C-------AT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           3672 50 -      8168 AC-A-AGAG---T-T-TACAT-TACCAA-CAGAAA-----------------GGC----TTC-AG---GG-T------C-A--------AA-CCTGGT-C-------AT
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 I 426
s Plecturocebus_bernhardi.k141_2549090                        7344 29 +     39866 CC-A-AGCG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA--------------------------------------------
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 11
s Plecturocebus_brunneus.k141_862875                          2428 29 -      9282 CC-A-AGTG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA--------------------------------------------
i Plecturocebus_brunneus.k141_862875                     C 0 I 11
s Plecturocebus_caligatus.k141_1382851                       41832 29 -     87950 CC-A-AGCG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA--------------------------------------------
i Plecturocebus_caligatus.k141_1382851                   C 0 I 11
s Plecturocebus_cinerascens.k141_1164729                     42226 29 -     88961 CC-A-AGCG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA--------------------------------------------
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 11
s Plecturocebus_cupreus.k141_2351393                          6924 29 -     39403 CC-A-AGCG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA--------------------------------------------
i Plecturocebus_cupreus.k141_2351393                     C 0 I 11
s Plecturocebus_dubius.k141_1058799                          41875 29 +     87928 CC-A-AGCG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA--------------------------------------------
i Plecturocebus_dubius.k141_1058799                      C 0 I 11
s Plecturocebus_grovesi.k141_2013005                          6921 29 -     60166 CC-A-AGCG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA--------------------------------------------
i Plecturocebus_grovesi.k141_2013005                     C 0 I 11
s Plecturocebus_hoffmannsi.k141_3303950                      13858 29 -     67232 CC-A-AGCG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA--------------------------------------------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 11
s Plecturocebus_miltoni.k141_349282                          41774 29 -     90634 CC-A-AGCG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA--------------------------------------------
i Plecturocebus_miltoni.k141_349282                      C 0 I 11
s Plecturocebus_moloch.k141_1031110                          43241 29 +     89403 CC-A-AGCG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA--------------------------------------------
i Plecturocebus_moloch.k141_1031110                      C 0 I 11
s Pongo_abelii.CM009266.2                                   177153 44 - 189387572 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      191970 44 -   9816681 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26776 31 +     69807 CC-A-TGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Presbytis_comata.k141_1230337                          C 0 I 3
s Presbytis_mitrata.k141_584736                              43972 31 -     80239 CC-A-TGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Presbytis_mitrata.k141_584736                          C 0 I 3
s Procavia_capensis.ProCapCap_scaffold_255930                 2661 33 +      3019 ------------------------CCAG-GA-AAC-----------------AGT----TGC-CA---GA-T------G-G--------CA-CCAGGT-C-------AG
i Procavia_capensis.ProCapCap_scaffold_255930            I 9 C 0
s Prolemur_simus.MPIZ01000396.1                            1981803 49 +   4620579 ac-a-aGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TAC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565271 49 -   2598838 ac-a-AGGG---TT--TGCAT-TACCGG-GA-AAA-----------------GGC----TGC-AG---GA-G------A-G--------GA-CCCGGT-C-------AC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2907 49 -      7103 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-G------A-G--------GA-CCCggt-c-------ac
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3504 49 -     11706 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-G------A-G--------GA-CCCGGT-C-------AC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7240 49 -     30655 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-G------A-G--------GA-CCCGGT-c-------ac
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33565 49 +     46564 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-G------A-G--------GA-CCCGGT-C-------AC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93836 49 -     98465 AC-A-AGGG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-G------A-G--------GA-CCCggt-c-------ac
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7473 49 +     35169 AC-A-AGGG---TT--TGCAT-TACCGG-GA-AAA-----------------GGC----TGC-AG---GA-G------A-G--------GA-CCCGGt-c-------ac
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36684 49 +     52041 AC-A-TGAG---TT--TCTAT-AACTGG-GA-AAA-----------------GGC----TGC-AG---GG-C------A-G--------CA-GCTGgc-t-------gt
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51355 49 -     66298 aT-A-AGAG---T-T-TACAT-TACCAA-GA-AAA-----------------GGC----TTC-AG---GG-T------A-T--------AA-CCTGGT-C-------AC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3887 49 -     18639 GC-G-AGAG---T-T-TACAT-GACTGG-GA-AAA-----------------GTC----TTC-AG---GG-T------A-C--------TA-CCTAGT-T-------AT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840073 45 -  28871421 ------GAG---T-T-TATAA-TGCCAA-GA-AAA-----------------ATC----TTC-AG---GG-T------A-G--------CA-CCTGGT-C-------AG
i Pteropus_alecto.KB030862.1                             I 2 C 0
s Pteropus_vampyrus.KN525825.1                             3536580 49 -   4952924 AT-A-AGAG---T-T-TATAA-TGCCAA-GA-AAA-----------------ATC----TTC-AG---AG-T------A-G--------CA-CCTGGT-C-------AG
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098339 48 +  38429054 GT-A-AGAG---T-T-TACAT-TACCAG-GA--AA-----------------GCC----TTC-AG---GG-T------G-G--------CA-CCTAGT-T-------AT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26150 31 +     91421 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Pygathrix_cinerea.k141_1153803                         C 0 I 3
s Pygathrix_nigripes_b.ctg100                                  152642 31 -   7812017 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Pygathrix_nigripes_b.ctg100                               C 0 I 3
s Pygathrix_nigripes_a.k141_215492                              7017 31 +     72585 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Pygathrix_nigripes_a.k141_215492                         C 0 I 3
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52410 50 +     55069 GC-A-AGAG---T-T-TATAC-TACTAA-CAAAAG-----------------TGC----TTC-AG---AG-T------C-A--------CA-ACTGGT-C-------AT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37021976 48 -  90668790 AC-A-TGAG---TT--TCTAT-TACTGG-GA--AA-----------------GAC----TGC-AG---CA-T------A-G--------CA-CTtggt-c-------at
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2913969 46 +   3329780 AC-A-AAAG---T-T-TACA----CCAA-GA-AAA-----------------GGC----TTC-AG---GG-T------A-G--------CA-CCTGgt-c-------ag
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              722 31 +      7119 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Rhinopithecus_bieti.k119_778604                        C 0 I 3
s Rhinopithecus_roxellana.NC_044550.1                    104121330 31 + 195417433 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 3
s Rhinopithecus_strykeri.ctg102                             235572 31 -   7961872 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Rhinopithecus_strykeri.ctg102                          C 0 I 3
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 73979 48 -    116970 AC-A-AGAA---T-T--CTAA-TGCCAA-GA-AAA-----------------ATC----TTC-AG---GG-T------A-G--------CA-CCTGAT-C-------AG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3224 45 +     27962 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3119 45 +      6077 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3210 44 +      5971 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA--CCGGT-C-------AT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3132 44 +      5932 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA--CCGGT-C-------AT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1474 44 -      4390 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA--CCGGT-C-------AT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390909 45 - 209938924 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3081 44 +      5979 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA--CCGGT-C-------AT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3843 45 -      4301 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7077 50 +     16473 GC-A-AGAG---T-T-TATAC-TACTAA-CAGAAA-----------------TGC----TTC-AG---AG-T------C-A--------CA-CCTGGT-C-------AT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108246 45 + 121099817 CC-A-AGAG---TT--GA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-GCTGGT-C-------AT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29813 45 -     47369 CC-A-AGAG---TT--GA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-GCTGGT-C-------AT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30199 45 -     79414 CC-A-AGAG---TT--GA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-GCTGGT-C-------AT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26890 45 -     34454 CC-A-AGAG---TT--GA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-GCTGGT-C-------AT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14293 45 -     22428 CC-A-AGAG---TT--GA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-GCTGGT-C-------AT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29445 45 -     47109 CC-A-AGAG---TT--GA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-GCTGGT-C-------AT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237503 45 +   5703754 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7093 45 +     21866 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGCAAA---GG-T------G-G--------CA-CCCGGT-C-------AT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115166 67 +    313613 AC-G-AG-T---T---CACAT-TACCAA-GA-A--CGTAACGTGAAAGTATAGGTATGAACC-AG---GG-T------A-G--------CA-CCTGGTTC-------AT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24469 31 +     27374 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Semnopithecus_entellus.k141_158471                     C 0 I 3
s Semnopithecus_hypoleucos.k141_1910531                      27983 31 +     58920 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Semnopithecus_hypoleucos.k141_1910531                  C 0 I 3
s Semnopithecus_johnii.k141_843753                           14479 31 -     45317 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Semnopithecus_johnii.k141_843753                       C 0 I 3
s Semnopithecus_priam.k141_714795                            22138 31 -     42441 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Semnopithecus_priam.k141_714795                        C 0 I 3
s Semnopithecus_schistaceus.k141_1432920                     24816 31 -     29113 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Semnopithecus_schistaceus.k141_1432920                 C 0 I 3
s Semnopithecus_vetulus.k141_244474                          27890 31 -     48123 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Semnopithecus_vetulus.k141_244474                      C 0 I 3
s Sigmodon_hispidus.SigHis_scaffold_20193                    48453 55 +     77746 AC-A-TGAA---TT--TCTAT-CACTGG-GG-AAA-----------------GGC----TGT-AG---GG-G------A-G--------CA-CCTGGT-CATAATG-CA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126            1857512 47 -   1910179 TC-A-AGAG---T---TATAT-TACCAA-GA-A-A-----------------GGT----TTC-AG---GG-T------A-G--------CA-CATGGT-C-------AT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670539 49 +  18376816 at-a-gGA--GCT---TA-TTGTACTAA-AT-AAA-----------------GAC----TAC-AG---GA-T------A-G--------CA-TTTGGT-C-------AT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867597 49 +   3870691 AC-A-ACAG---TT--TATAT-TACTGG-GA-AAA-----------------GGC----TAT-GA---GA-T------T-G--------CA-CCTGCT-T-------AT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5877 49 -     97271 GC-A-ACCG---T-T-TATGC-TACTAG-GA-AAA-----------------GTC----TTC-AG---GA-T------A-C--------TA-CCTAGT-T-------GT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124115 47 +    196729 AT-T-AGAG---T---TACAT-TACTCA-GA--AA-----------------GTC----GTC-AG---GG-T------G-G--------CA-CCTAGT-T-------AT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643009 50 +  69701581 AC-A-ATAG---T-T-TACAG-TACCAA-CAAAAA-----------------AGC----TTC-AA---GG-T------C-A--------CA-GCTGAA-C-------AT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390397 44 +   1523678 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13336 49 +     22964 AC-C-AGAG---T-T-TACAT-TACCAA-GA-AAA-----------------ggc----ttc-aa---ag-t------g-g--------ca-cctgct-c-------ag
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1918 49 +      5583 AC-A-AGAG---TT--TACAG-TACCAG-GA-AAA-----------------GCC----TGT-CA---GG-T------A-G--------TG-CTTGGT-C-------AT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190808 44 +    199430 ------GAG---T--CTACAT-TACCAA-GA-AAA-----------------GGC-----TT-AG---GG-T------T-G--------CA-CCTGGT-C-------AT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104761 48 -    539355 AC-A-AGAG---T--CTACAT-TACCAA-GA-AAA-----------------GGC-----TC-AG---GG-T------T-G--------CA-CCTGGT-C-------AT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6085 48 +      6850 AC-A-AGAG---TT--TATAT-TACCAG-GA-AA------------------GGC----TGC-AA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6136 48 +     20590 AC-A-AGAG---TT--TATAT-TACCAG-ga-aa------------------ggc----tgc-aa---gg-t------a-g--------ca-cctggt-c-------at
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352353 44 - 186847797 CC-A-AGAG---TT--TA------CCAG-GA-AAA-----------------AGC----TGC-GA---GG-T------A-G--------CA-CCTGGT-C-------AT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19023 49 -     31044 AT-A-AGAG---TT--TAC-TGTACCAG-GA-AAA-----------------GCC----TGT-CA---GG-T------A-G--------CA-CCTGGT-C-------GT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479380 50 -    610378 ATGA-AGAG---T-T-TACAT-TGTCAA-GA-AAA-----------------GGC----TGC-AG---GG-T------A-G--------CA-CCTGGT-C-------AC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20015 31 +     26378 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Trachypithecus_auratus.k141_1189070                    C 0 I 3
s Trachypithecus_crepusculus.k141_539312                     32693 31 -     78344 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Trachypithecus_crepusculus.k141_539312                 C 0 I 3
s Trachypithecus_cristatus.k141_180416                       19340 31 +     25722 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Trachypithecus_cristatus.k141_180416                   C 0 I 3
s Trachypithecus_francoisi.k141_1453105                      27645 31 -     62838 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Trachypithecus_francoisi.k141_1453105                  C 0 I 3
s Trachypithecus_geei.k141_1001272                           27691 31 +     46913 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGT----TGC-AA---GG-T-------------------------------------
i Trachypithecus_geei.k141_1001272                       C 0 I 3
s Trachypithecus_germaini.k141_57262                          8500 31 -     28527 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Trachypithecus_germaini.k141_57262                     C 0 I 3
s Trachypithecus_hatinhensis.k141_31479                      29582 31 -     64340 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 3
s Trachypithecus_laotum.k141_928651                          27619 31 -     63452 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Trachypithecus_laotum.k141_928651                      C 0 I 3
s Trachypithecus_leucocephalus.k141_96450                     9064 31 +     22490 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Trachypithecus_leucocephalus.k141_96450                C 0 I 3
s Trachypithecus_melamera.k141_591572                         2490 31 -      6147 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Trachypithecus_melamera.k141_591572                    C 0 I 3
s Trachypithecus_obscurus.k141_848057                         9395 31 -     13050 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Trachypithecus_obscurus.k141_848057                    C 0 I 3
s Trachypithecus_phayrei.ctg124                             254635 31 -   6242583 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGC----TGC-AA---GG-T-------------------------------------
i Trachypithecus_phayrei.ctg124                          C 0 I 3
s Trachypithecus_pileatus.k141_2622778                         659 31 +     19340 CC-A-AGAG---TT--TA------CCAG-AA-AAA-----------------GGT----TGC-AA---GG-T-------------------------------------
i Trachypithecus_pileatus.k141_2622778                   C 0 I 3
s Tragulus_javanicus.TraJav_scaffold_3462                   172691 50 -    200418 AC-A-AGAG---T-T-TATAC-TATCAA-CAAAAA-----------------TGC----TTC-AA---AG-T------C-A--------CA-CTTGGC-C-------AT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479652 49 -  10818551 AC-A-ACAG---TT--TATAC-TTCCAG-GA-AAA-----------------GGC----TGC-CA---GG-T------A-G--------CA-CCGGGT-C-------AG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833320 48 -   4065304 aa-a-agaa---ta--ta-ta-caccAG-GT-AAA-----------------GGC----TGC-AG---GG-T------A-G--------TA-CCTGGT-T-------AT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7309 48 -     70247 AA-A-AGAC---TA--TATA--CACCAG-GT-AAA-----------------GAC----TGC-AG---AG-T------A-G--------TA-CCTGGT-T-------AT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360465 50 -  33153633 AC-A-AGAG---T-T-TACAT-TACCGA-CAAAAA-----------------GGC----TTC-AG---GG-T------C-A--------AA-CCTggt-c-------at
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 444
s Uropsilus_gracilis.UroGra_scaffold_46687                    2908 48 -     21056 -C-A-AG-T---T---TGCAT-TAACAAGGA-AAT-----------------GGT----TTC-AG---GG-T------A-G--------CA-CCTTGTTC-------AT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181055 49 +   5085361 GC-A-AGAG---T-T-TACAT-TACCGG-GA-AAA-----------------GTC----TTC-AG---GG-T------A-C--------CA-CCtagt-t-------at
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24447 49 -     30710 AC-A-AGAG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23354 49 -    147434 AC-A-AGAG---TT--TACAT-TACCAG-GA-AAA-----------------GGC----TGC-AG---GA-T------A-G--------GA-CCTGGT-C-------AC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75536 49 +   5488506 AC-A-AGAG---T-T-TACAT-TACCAA-CAAAAA-----------------GGC-----TC-AG---GG-T------C-A--------CA-CCTTGG-T-------AC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104195 49 -    112863 AC-A-AGAG---C-T-TACAT-TACCAG-GA-AAA-----------------GTC----TTC-AG---GG-T------A-C--------TA-TCTAGT-T-------AT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173386 49 -    224448 AC-A-ACTA---TT--TACAT-TACTGG-GA-AAA-----------------GGC----TAT-GA---GA-T------C-A--------AA-CCTACT-T-------AT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28092 49 -     86975 GC-A-AGAG---T-T-TACAT-TACTGG-GA-AAA-----------------GTC----TTC-AG---GG-T------A-C--------TA-CCTAGT-T-------AT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       390 47 -       753 AC-A-C--A---TT--TATAT-TACTGG-AA-CAA-----------------GGC----TGA-AA---AC-T------A-G--------CA-CTGTGT-T-------AT
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             102 50 +      1812 AC-A-AGAG---T-T-TACGT-TACCAA-CAAAAA-----------------GGC----TTC-AG---GG-T------C-A--------AA-CCTGGT-C-------AT
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 I 215
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4730 4 +     36723 A---CC-T
s Acinonyx_jubatus.LLWD01001279.1                           812126 4 +   1699592 A---CT-T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24384 4 +     63021 G---CC-T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414591 4 +  29979442 a---ct-t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214906 4 +    347723 g---ct-t
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17327 4 -     61208 g---ct-t
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 2
s Allenopithecus_nigroviridis.k141_3755588                   47046 4 +     53615 A---TC-T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43007 4 +     44087 A---CC-T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15632 4 -     21945 A---CC-T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17315 4 +     32033 A---CC-T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71487 4 -     84148 A---CT-T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43726 4 -     78289 A---CT-T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43165 4 +     55831 A---CT-T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41615 4 -     64179 A---CT-T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23249 4 -     24835 A---CT-T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40240 4 +     45454 A---CT-T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45886 4 +     70886 A---CT-T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8062 4 +     30854 A---CT-T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32198 4 +     42133 A---CT-T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584578 4 +   2318259 A---CT-T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176388 4 -    412891 A---CT-T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49693 4 -     68529 A---CT-T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     441 4 +     17741 A---CT-T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1066 4 -     15923 A---CT-T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1341 4 -     16391 A---CT-T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                901 4 -     17186 A---CT-T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15289 4 -     32367 A---CT-T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18825 4 -     45910 C---CC-C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4664 4 -     15198 A---CT-T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273949 4 +  21539123 A---CT-T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10116 4 +     48076 A---CT-T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5253 4 -     28759 A---CT-T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32806 4 +     44353 A---CT-T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48176 4 -     71267 A---CT-T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22235 4 -     33135 A---CT-T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5436 4 +     11645 A---CC-T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5442 4 -     19611 A---CC-t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956487 4 -  23207421 A---CT-T
i Balaenoptera_acutorostrata.KI537508.1                  I 218 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3696 4 -      4711 A---CT-T
i Balaenoptera_bonaerensis.DF507193.1                    I 218 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85587 4 +    124022 A---CT-T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21119 4 +    288883 A---CT-T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355505 4 +  48749331 A---CT-T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754073 4 +   1948126 A---CT-T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544212 4 -  45695690 A---CT-T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529237 4 -   4408762 A---CT-T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7123 4 +     28062 A---CT-T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42417 4 -     91139 A---CT-T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19943 4 +     95584 A---CT-T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19856 4 +    119600 A---CT-T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9423 4 +     18648 A---CT-T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8962 4 -     13885 A---CT-T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1028 4 -      8861 A---CT-T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453421 4 + 189096842 A---CT-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                943 4 +      8664 A---CT-T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630251 4 +  17673402 A---CT-T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664537 4 +   7040546 A---CT-T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208197 4 +   1652518 A---CT-T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504613 4 +  60362399 A---CT-T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8249 4 -     23171 A---CT-T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221592 4 +   9314153 a---ct-t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614727 4 +  59632846 a---ct-t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106308 4 -  63665305 a---ct-t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408308 4 -  46296322 A---CT-T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590581 4 +  44709034 A---CT-T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269509 4 +    496798 A---CC-t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                606 4 -      1021 A---CT-T
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26926 4 -     39886 G---CT-T
i Castor_canadensis.CasCan_scaffold_39952                I 16 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78792 4 -    217609 A---CT-T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995645 4 +  23392119 T---CT-T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999087 4 +  23407841 T---CT-T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62168 4 -     66877 T---CT-T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4341 4 -     12580 A---CT-T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42399 4 +     53515 A---CT-T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370330 4 -  26074798 A---CT-T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7219 4 -     34880 A---CT-T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66314 4 -     89041 A---CT-T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1438 4 -      5494 a---cc-t
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491405 4 -  27778364 A---TG-T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18238 4 +     27315 A---TG-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140229 4 -   4669795 A---CC-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43971 4 +     47900 A---CC-T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43796 4 -     44860 A---CC-T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43784 4 -    148725 A---CC-T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25961 4 -     40656 A---CC-T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5927 4 +     20796 A---CC-T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11044 4 -     17524 A---CC-T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26766 4 -     34525 A---CC-T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10547 4 -     25376 A---CC-T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363143 4 -  39242232 A---CC-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268859 4 +  21565898 A---CC-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31233 4 -     45857 A---CC-T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26132 4 -     32606 A---CC-T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2291 4 +      8499 A---CC-T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24689 4 +     70610 A---CC-T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21658 4 +     36323 A---CC-T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12039 4 -     19938 G---CC-T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29848 4 -     33796 A---CC-T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4365 4 -     15404 A---CC-T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8216 4 -     32913 A---CT-T
i Cheracebus_lucifer.k141_2312002                        I 11 C 0
s Cheracebus_lugens.k141_1179667                             18629 4 -     40346 A---CT-T
i Cheracebus_lugens.k141_1179667                         I 11 C 0
s Cheracebus_regulus.k141_471822                             18884 4 +    216457 A---CT-T
i Cheracebus_regulus.k141_471822                         I 11 C 0
s Cheracebus_torquatus.k141_890198                           18677 4 +     39636 A---CT-T
i Cheracebus_torquatus.k141_890198                       I 11 C 0
s Chinchilla_lanigera.JH722012.1                           1238097 4 -   2543920 A---CT-T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3271 4 +      5346 A---CT-T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41754 4 -    112038 A---CT-T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7325 4 +     34062 A---CT-T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342549 4 +  18827391 A---CC-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9096 4 -     44032 A---CC-T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303873 4 - 135778131 A---CC-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14010 4 +     15858 A---TC-T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605586 4 -    839153 A---TC-T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408302 4 -   2368649 A---CC-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378177 4 - 200372422 A---CC-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1726 4 -     84244 A---CC-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806419 4 +  53390261 A---CT-T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2009 4 -      8242 A---TT-T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43536 4 -     83289 T---CC-C
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213113972 4 - 224834208 C---CC-c
i Cricetulus_griseus.LT883664.1                          I 1 I 3
s Crocidura_indochinensis.CroInd_scaffold_77846               6680 4 +     12657 A---CT-T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3519 4 +     87169 a---ct-t
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644234 4 -   1526836 A---CT-T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17554 4 +     50838 A---CA-T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3532 4 +     36344 T---TT-T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27330 4 +     75252 A---CT-T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109384 4 -   2246927 G---CC-T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291782 4 +  12879189 A---CC-T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625019 4 -  35494412 A---CT-T
i Delphinapterus_leucas.KZ290073.1                       I 421 C 0
s Desmodus_rotundus.KZ672289.1                            11864409 4 -  20541912 A---CT-T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663694 4 -   1390856 A---TG-T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138482 4 -    198055 A---TG-T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98087 4 -    115145 a---tt-g
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949711 4 -  37912305 G---CT-T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4646 4 -     10735 G---CT-T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9580 4 +     14636 A---CT-T
i Dolichotis_patagonum.DolPat_scaffold_80628             I 6 C 0
s Echinops_telfairi.JH980293.1                            62854155 4 - 111700974 G---AC-T
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5470 4 +     19438 A---CT-T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238964 4 -    607251 A---CT-T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107768 4 -  10337057 A---GC-T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30253 4 +    110024 c---tc-t
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01026522.1                           12240 4 +     18970 c---tc-t
i Ellobius_talpinus.LOJH01026522.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               24915333 4 +  41312741 A---CT-T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578040 4 +  14770903 A---CT-T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040562 4 -   4378816 A---TG-T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374486 4 +  39960074 A---TG-T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411272 4 -    498745 A---TG-T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665339 4 +   7059049 A---AT-T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262076 4 +  21539334 A---CC-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64365 4 -    133382 A---CT-T
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 217 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4578 4 +      7672 A---CT-T
i Eubalaena_japonica.EubJap_flattened_line_118172        I 213 C 0
s Eulemur_albifrons.k141_51491                               13979 4 -     24895 A---CC-T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41688 4 -     70999 A---CC-T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85650 4 +    112731 A---CC-T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42219 4 +     68309 A---CC-T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52545 4 -     65740 A---CC-T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23174 4 -     75513 A---CC-T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47371 4 -     97555 A---CC-T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4096 4 +     30972 A---CC-T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41816 4 -     52037 A---CC-T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58218 4 -    111500 A---CC-T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246035 4 - 206538554 A---CT-T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115821 4 - 205367284 A---CT-T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26922 4 -     30238 A---CT-T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124241 4 -    137831 C---CC-C
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7786 4 +     22493 C---CC-C
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19853 4 -     32986 C---CC-C
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 378 4 -     28519 A---CA-T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90657 4 -     95226 A---CT-T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33727 4 -     36801 A---CT-T
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5032 4 -      8343 A---CC-T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254044 4 - 186649187 A---CC-T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1218 4 -     78134 A---CT-T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13904 4 -     40692 A---CC-T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35306 4 +     49394 A---CC-T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60174 4 -     66874 A---CC-T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9048 4 -     42923 A---CC-T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16048 4 -     53142 A---CC-T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30006 4 -    327341 A---CT-T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8415 4 +     48891 A---CT-T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6315 4 +      6687 A---GC-T
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6858 4 -     36432 A---CT-T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                222 4 -      2730 a---tt-t
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142052 4 -    630532 A---CC-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68925 4 +     83186 A---CT-T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71052 4 +    143317 A---CT-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5087 4 +     12352 A---CC-T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12271 4 +     55766 A---CC-T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051869 4 + 191637585 A---CC-T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800747 4 +  11177569 A---CC-T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3703 4 -    135385 A---CT-T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386066 4 +   7955117 A---GT-A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1558 4 +     11955 a---cc-t
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2830 4 -     16823 A---CT-T
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 445 C 0
s Jaculus_jaculus.JH725527.1                               1238838 4 +   9596543 g---ct-t
i Jaculus_jaculus.JH725527.1                             C 0 I 2
s Kogia_breviceps.KogBre_flattened_line_3970                 65078 4 -     97402 A---CT-T
i Kogia_breviceps.KogBre_flattened_line_3970             I 214 C 0
s Lagothrix_lagothricha.k141_246028                          42493 4 +    110728 A---CT-T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    61900 4 -     65777 A---CT-T
i Lasiurus_borealis.LasBor_scaffold_16567                I 49 I 211
s Lemur_catta.scaffold_24                                 14758697 4 +  30322482 A---CC-T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3406 4 -     13097 A---CT-T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3160 4 +      5940 A---CT-T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2990 4 -      5717 A---CT-T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9366 4 -     11567 A---CT-T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10747 4 -     12945 A---CT-T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8225 4 +     29618 A---CC-T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8221 4 +     31569 A---CC-T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8232 4 +     24756 A---CC-T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8231 4 +     16388 A---CC-T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812747 4 -   3914936 a---ct-t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17068 4 +     24238 A---CA-A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             334364 4 +    662738 A---CT-T
i Lipotes_vexillifer.KE559953.1                          I 459 C 0
s Lophocebus_aterrimus.ctg367                               333114 4 -   1826925 A---CC-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9806 4 +     19643 C---CC-C
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043463 4 -   6120653 c---cc-c
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080242 4 +  43346337 A---AC-T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613882 4 +  59628241 a---ct-t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44498 4 -     61512 A---CC-T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372160 4 -  60120075 A---CC-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24423 4 +     30207 A---CC-T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21526 4 -     24934 A---CC-T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24376 4 +     30527 A---CC-T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35552 4 -     50087 A---CC-T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45296 4 +     51645 A---CC-T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414498 4 - 187317192 A---CC-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398729 4 +  25927173 A---CC-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47901 4 -     62418 A---CC-T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  439 4 +     14901 A---CC-T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44373 4 +     59329 A---CC-T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270281 4 +    668171 A---CC-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  557 4 +      1732 A---CC-T
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2079 4 +     17132 A---CC-T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222433 4 -    270270 A---CT-T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321578 4 +  24302211 A---CC-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356410 4 -    752769 A---CC-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672766 4 -    737560 A---CT-T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220050 4 +    317179 A---CT-T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500286 4 +  40650429 A---GT-A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149599 2 +    207569 a---c---
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_19308             25437 4 -     74585 A---CT-T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49392 4 -    140813 G---TC-T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428483 4 +  29670104 c---cc-t
i Mesocricetus_auratus.KB708134.1                        I 1 I 52
s Mesoplodon_bidens.MesBid_scaffold_6114                     80663 4 +     93471 A---CT-T
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 214 C 0
s Mico_argentatus.k141_582562                                 9532 4 +     17804 A---CT-T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10034 4 -     12984 A---CT-T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18348 4 -     26561 A---CT-T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983835 4 +  93316391 G---CC-T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45201 4 +    145209 G---CC-T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184354 4 +    200668 A---CT-T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961701 2 +  27267610 c---t---
i Microtus_ochrogaster.CM001695.1                        I 1 I 8
s Miniopterus_natalensis.LDJU01000034.1                    6362457 4 -   8254450 A---CC-T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41356 4 -     48117 A---CC-T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21586 4 -     27822 A---CC-T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7754 4 +     27589 A---CT-T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51624 4 -     62432 T---CC-T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352762 4 +    437263 A---CT-T
i Monodon_monoceros.MonMon_M_scaffold_103                I 421 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178519 4 +    366855 A---CT-T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24776 4 -     82753 A---CT-T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17758 4 -     63510 A---CT-T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38398 4 +     47283 A---CT-T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592427 4 + 120012414 a---cc-c
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686812 4 + 129401213 a---cc-c
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216677 4 +  89631738 A---CC-a
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39496108 4 + 130317789 a---cc-c
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82556 4 -     86153 A---CT-T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354365 4 +  14710649 A---CT-T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792648 4 +  10118263 A---CT-T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386808 4 +   6019432 A---CT-T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382627 4 +   4330536 A---CT-T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1455 4 +     18357 A---CT-T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118977 4 +    130748 A---CC-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945460 4 +   3037898 G---CC-t
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28227 4 +     34575 A---CC-T
i Nasalis_larvatus.k141_1350636                          I 3 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468349 4 -  31847680 a---ct-t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226932 4 -   7148211 A---CT-T
i Neophocaena_asiaeorientalis.KZ687982.1                 I 422 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127477 3 -    149072 ----CT-T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52979 5 -    132029 A---CCCT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9074 5 -     16345 A---CCCT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14959 5 +     22201 A---CCCT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413180 5 -  22158432 A---CCCT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25357 5 -     54323 A---CCCT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197475 4 +   9404916 a---ct-t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635833 4 + 196305487 C---CC-C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2591 4 -      3937 C---CC-C
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564098 4 - 199412804 C---CC-C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550431 4 -   3988456 A---CA-T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450946 4 +   2017862 a---ct-t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435541 4 -    630418 A---CT-T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13541 4 +    150152 A---CT-T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92036 4 -    140218 C---TC-T
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2928 4 -     41509 C---CT-T
i Onychomys_torridus.OnyTor_scaffold_28377               I 1 C 0
s Orcinus_orca.KB316932.1                                  8096216 4 +  10937097 A---CT-T
i Orcinus_orca.KB316932.1                                I 435 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12881 4 -     14239 A---AG-T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102905 4 - 174332312 A---CA-A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38522 4 +    559221 a---ct-t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39402 4 -     51505 C---CC-C
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352405 4 +   1103335 C---CC-c
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403535 4 -  44047080 A---CT-T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4054 4 +     17875 A---CT-T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             11668 7 -     26668 AATCAC-C
i Pan_troglodytes.NBAG03003091.1                         C 0 I 156
s Panthera_onca.PanOnc_flattened_line_3271                   23747 4 -    230217 A---CT-T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461073 4 -  18783137 A---CT-T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971730 4 +   8748460 A---CT-T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614973 4 +   2937107 A---CT-T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242411 4 - 183742232 A---CC-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8873 4 +     21308 A---CC-T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291447 4 -  20919399 A---CC-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21521 4 -     27687 A---CC-T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14667 4 +     16796 A---CC-T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21478 4 -     23640 A---CC-T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14342 4 +     78924 A---CT-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25612 4 +     31479 C---CC-C
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17981 4 -     24908 C---CC-C
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1042 4 +      9367 G---CT-T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246126 4 +  18517816 c---tg-t
i Peromyscus_maniculatus.KI615324.1                      I 4 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12058 4 -     15039 A---CT-T
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 423 C 0
s Piliocolobus_badius.k141_2704958                            1685 4 +     55023 A---CC-T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1235 4 -     89929 A---CC-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1824 4 +     40849 A---CC-T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253488 4 +  14605196 A---CC-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2980 4 +     22231 A---CT-T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64130 4 +    207309 A---CT-T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5223 4 -     25401 A---CT-T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30966 4 +     58159 A---CT-T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31242 4 +     63561 A---CT-T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31002 4 +     51148 A---CT-T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555972 4 -   4542175 A---CT-T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30986 4 +     51125 A---CT-T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4148 4 -      8168 A---CT-T
i Platanista_gangetica.PlaMin_flattened_line_167872      I 426 C 0
s Plecturocebus_bernhardi.k141_2549090                        7384 4 +     39866 A---CT-T
i Plecturocebus_bernhardi.k141_2549090                   I 11 C 0
s Plecturocebus_brunneus.k141_862875                          2468 4 -      9282 A---CT-T
i Plecturocebus_brunneus.k141_862875                     I 11 C 0
s Plecturocebus_caligatus.k141_1382851                       41872 4 -     87950 A---CT-T
i Plecturocebus_caligatus.k141_1382851                   I 11 C 0
s Plecturocebus_cinerascens.k141_1164729                     42266 4 -     88961 A---CT-T
i Plecturocebus_cinerascens.k141_1164729                 I 11 C 0
s Plecturocebus_cupreus.k141_2351393                          6964 4 -     39403 A---CT-T
i Plecturocebus_cupreus.k141_2351393                     I 11 C 0
s Plecturocebus_dubius.k141_1058799                          41915 4 +     87928 A---CT-T
i Plecturocebus_dubius.k141_1058799                      I 11 C 0
s Plecturocebus_grovesi.k141_2013005                          6961 4 -     60166 A---CT-T
i Plecturocebus_grovesi.k141_2013005                     I 11 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13898 4 -     67232 A---CT-T
i Plecturocebus_hoffmannsi.k141_3303950                  I 11 C 0
s Plecturocebus_miltoni.k141_349282                          41814 4 -     90634 A---CT-T
i Plecturocebus_miltoni.k141_349282                      I 11 C 0
s Plecturocebus_moloch.k141_1031110                          43281 4 +     89403 A---CT-T
i Plecturocebus_moloch.k141_1031110                      I 11 C 0
s Pongo_abelii.CM009266.2                                   177197 4 - 189387572 A---CC-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192014 4 -   9816681 A---CC-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26810 4 +     69807 A---CC-T
i Presbytis_comata.k141_1230337                          I 3 C 0
s Presbytis_mitrata.k141_584736                              44006 4 -     80239 A---CC-T
i Presbytis_mitrata.k141_584736                          I 3 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2694 4 +      3019 A---GC-T
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981852 4 +   4620579 A---CC-T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565320 4 -   2598838 A---CC-T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2956 4 -      7103 a---cc-t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3553 4 -     11706 A---CC-T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7289 4 -     30655 a---cc-t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33614 4 +     46564 A---CC-T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93885 4 -     98465 a---cc-t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7522 4 +     35169 a---cc-t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36733 4 +     52041 g---tc-t
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51404 4 -     66298 A---CT-T
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3936 4 -     18639 A---CT-T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840118 4 -  28871421 A---CT-T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536629 4 -   4952924 A---CT-T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098387 4 +  38429054 A---CT-T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26184 4 +     91421 A---CC-T
i Pygathrix_cinerea.k141_1153803                         I 3 C 0
s Pygathrix_nigripes_b.ctg100                                  152676 4 -   7812017 A---CC-T
i Pygathrix_nigripes_b.ctg100                               I 3 C 0
s Pygathrix_nigripes_a.k141_215492                              7051 4 +     72585 A---CC-T
i Pygathrix_nigripes_a.k141_215492                         I 3 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52460 4 +     55069 A---CT-T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022024 4 -  90668790 c---tc-t
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914015 4 +   3329780 a---tt-t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              756 4 +      7119 A---CC-T
i Rhinopithecus_bieti.k119_778604                        I 3 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121364 4 + 195417433 A---CC-T
i Rhinopithecus_roxellana.NC_044550.1                    I 3 C 0
s Rhinopithecus_strykeri.ctg102                             235606 4 -   7961872 A---CC-T
i Rhinopithecus_strykeri.ctg102                          I 3 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74027 4 -    116970 A---Ct-t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3269 4 +     27962 A---CT-T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3164 4 +      6077 A---CT-T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3254 4 +      5971 A---CT-T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3176 4 +      5932 A---CT-T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1518 4 -      4390 A---CT-T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390954 4 - 209938924 A---CT-T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3125 4 +      5979 A---CT-T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3888 4 -      4301 A---CT-T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7127 4 +     16473 A---CT-T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108291 4 + 121099817 A---CT-T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29858 4 -     47369 A---CT-T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30244 4 -     79414 A---CT-T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26935 4 -     34454 A---CT-T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14338 4 -     22428 A---CT-T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29490 4 -     47109 A---CT-T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237548 4 +   5703754 A---CT-T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7138 4 +     21866 A---CT-T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115233 4 +    313613 A---CT-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24503 4 +     27374 A---CC-T
i Semnopithecus_entellus.k141_158471                     I 3 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28017 4 +     58920 A---CC-T
i Semnopithecus_hypoleucos.k141_1910531                  I 3 C 0
s Semnopithecus_johnii.k141_843753                           14513 4 -     45317 A---CC-T
i Semnopithecus_johnii.k141_843753                       I 3 C 0
s Semnopithecus_priam.k141_714795                            22172 4 -     42441 A---CC-T
i Semnopithecus_priam.k141_714795                        I 3 C 0
s Semnopithecus_schistaceus.k141_1432920                     24850 4 -     29113 A---CC-T
i Semnopithecus_schistaceus.k141_1432920                 I 3 C 0
s Semnopithecus_vetulus.k141_244474                          27924 4 -     48123 A---CC-T
i Semnopithecus_vetulus.k141_244474                      I 3 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48509 4 +     77746 C---CC-T
i Sigmodon_hispidus.SigHis_scaffold_20193                I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857559 4 -   1910179 A---GT-T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670588 4 +  18376816 A---CT-T
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867646 4 +   3870691 A---GT-A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5926 4 -     97271 A---CT-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124162 4 +    196729 A---CT-T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643059 4 +  69701581 A---CT-T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390441 4 +   1523678 A---CC-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13385 4 +     22964 a---ct-t
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1967 4 +      5583 A---CC-T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190852 4 +    199430 A---CA-T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104809 4 -    539355 A---CA-T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6133 4 +      6850 A---CC-T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6184 4 +     20590 a---cc-t
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352397 4 - 186847797 A---CC-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19072 4 -     31044 A---CC-T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479430 4 -    610378 A---CT-T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20049 4 +     26378 A---CC-T
i Trachypithecus_auratus.k141_1189070                    I 3 C 0
s Trachypithecus_crepusculus.k141_539312                     32727 4 -     78344 A---CC-T
i Trachypithecus_crepusculus.k141_539312                 I 3 C 0
s Trachypithecus_cristatus.k141_180416                       19374 4 +     25722 A---CC-T
i Trachypithecus_cristatus.k141_180416                   I 3 C 0
s Trachypithecus_francoisi.k141_1453105                      27679 4 -     62838 A---CC-T
i Trachypithecus_francoisi.k141_1453105                  I 3 C 0
s Trachypithecus_geei.k141_1001272                           27725 4 +     46913 A---CC-T
i Trachypithecus_geei.k141_1001272                       I 3 C 0
s Trachypithecus_germaini.k141_57262                          8534 4 -     28527 A---CC-T
i Trachypithecus_germaini.k141_57262                     I 3 C 0
s Trachypithecus_hatinhensis.k141_31479                      29616 4 -     64340 A---CC-T
i Trachypithecus_hatinhensis.k141_31479                  I 3 C 0
s Trachypithecus_laotum.k141_928651                          27653 4 -     63452 A---CC-T
i Trachypithecus_laotum.k141_928651                      I 3 C 0
s Trachypithecus_leucocephalus.k141_96450                     9098 4 +     22490 A---CC-T
i Trachypithecus_leucocephalus.k141_96450                I 3 C 0
s Trachypithecus_melamera.k141_591572                         2524 4 -      6147 A---CC-T
i Trachypithecus_melamera.k141_591572                    I 3 C 0
s Trachypithecus_obscurus.k141_848057                         9429 4 -     13050 A---CC-T
i Trachypithecus_obscurus.k141_848057                    I 3 C 0
s Trachypithecus_phayrei.ctg124                             254669 4 -   6242583 A---CC-T
i Trachypithecus_phayrei.ctg124                          I 3 C 0
s Trachypithecus_pileatus.k141_2622778                         693 4 +     19340 A---CC-T
i Trachypithecus_pileatus.k141_2622778                   I 3 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172741 4 -    200418 A---CT-T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479701 4 -  10818551 A---AC-T
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833368 4 -   4065304 A---GC-T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7357 4 -     70247 A---GC-T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360959 4 -  33153633 A---CT-T
i Tursiops_truncatus.MRVK01000835.1                      I 444 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2956 4 -     21056 A---TT-T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181104 4 +   5085361 a---ct-t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24496 4 -     30710 A---CC-T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23403 4 -    147434 A---CC-T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75585 4 +   5488506 A---CT-T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104244 4 -    112863 A---CT-T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173435 5 -    224448 AA--GT-T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28141 4 -     86975 A---CT-T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       437 4 -       753 G---CT-T
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_572595             367 4 +      1812 A---CT-T
i Ziphius_cavirostris.ZipCav_flattened_line_572595       I 215 C 0
e Capromys_pilorides.CapPil_scaffold_652123                    750 26 -      1880 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Octodon_degus.JH651603.1                                11054346 0 -  11899542 C
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4734  8 +     36723 TTA-----AA-TGA
s Acinonyx_jubatus.LLWD01001279.1                           812130  8 +   1699592 GTG-----Aa-cga
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24388  1 +     63021 C-------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 32
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414595  8 +  29979442 tta-----aa-aga
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214910  8 +    347723 tca-----aa-aga
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17333  3 -     61208 -----------tca
i Allactaga_bullata.AllBul_scaffold_20030                I 2 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47050  8 +     53615 TCA-----AA-TGA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43011  8 +     44087 TCA-----AA-TGA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15636  8 -     21945 TCA-----AA-TGA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17319  8 +     32033 TCA-----AA-TGA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71491  8 -     84148 TTA-----AA-TGG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43730  8 -     78289 TTA-----AA-TGG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43169  8 +     55831 TTA-----AA-TGG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41619  8 -     64179 TTA-----AA-TGG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23253  8 -     24835 TTA-----AA-TGG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40244  8 +     45454 TTA-----AA-TGG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45890  8 +     70886 TTA-----AA-TGG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8066  8 +     30854 TTA-----AA-TGG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32202  8 +     42133 TTA-----AA-TGG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584582  8 +   2318259 TTA-----AA-TGA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176392  8 -    412891 TCA-----AA-TGA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49697  8 -     68529 TTA-----AA-TGA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     445  8 +     17741 TTA-----AA-TGA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1070  8 -     15923 TTA-----AA-TTA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1345  8 -     16391 TTA-----AA-TGA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                905  8 -     17186 TTA-----AA-TGA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15293  8 -     32367 TTA-----AT-TGA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18829  2 -     45910 TC------------
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4668  8 -     15198 TCA-----GA-TGA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273953  8 +  21539123 TTA-----AA-TGG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10120  8 +     48076 TTA-----AA-TGG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5257  8 -     28759 TTA-----AA-TGG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32810  8 +     44353 TTA-----AA-TGG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48180  8 -     71267 TTA-----AA-TGG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22239  8 -     33135 TTA-----AA-TGG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5440  8 +     11645 TTA-----AA-TGG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5446  8 -     19611 tta-----aa-tgg
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956491  8 -  23207421 TTA-----AA-taa
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3700  8 -      4711 TTA-----AA-taa
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85591  8 +    124022 TTA-----AA-TGA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21123  8 +    288883 TTA-----AA-TGA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355509  8 +  48749331 TTA-----AA-TGA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754077  8 +   1948126 TTA-----AA-TGA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544216  8 -  45695690 TTA-----AA-TGA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529241  8 -   4408762 TTA-----AA-TGA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7127  8 +     28062 TTA-----AA-TGA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42421  8 -     91139 TTA-----AA-TGA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19947  8 +     95584 TTA-----AA-TGA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19860  8 +    119600 TTA-----AA-TGA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9427  8 +     18648 TTA-----AA-TGA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8966  8 -     13885 TTA-----AA-TGA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1032  8 -      8861 TTA-----AA-TGA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453425  8 + 189096842 TTA-----AA-TGA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                947  8 +      8664 TTA-----AA-TGA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630255  8 +  17673402 TTA-----AA-TGA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664541  8 +   7040546 TTA-----AA-TGA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208201  8 +   1652518 TTA-----AA-TGA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504617  8 +  60362399 TTA-----AA-AGA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8253  8 -     23171 TTA-----AA-AGA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221596  8 +   9314153 tta-----aa-aga
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614731  8 +  59632846 tta-----aa-aga
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106312  8 -  63665305 tta-----aa-aga
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408312  8 -  46296322 TCA-----AA-TGA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590585  8 +  44709034 TCA-----AA-TGA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    776  1 -      1880 -------------C
i Capromys_pilorides.CapPil_scaffold_652123              I 26 C 0
s Carlito_syrichta.NW_007259797.1                           269513  8 +    496798 tta-----aa-tca
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                610  8 -      1021 TCA-----AA-TGA
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26930  6 -     39886 TTA-----AG-G--
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     78796  8 -    217609 TTA-----AA-TGA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995649  8 +  23392119 TTA-----AG-TGC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999091  8 +  23407841 TTA-----AG-TGC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62172  8 -     66877 TTA-----AG-TGC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4345  8 -     12580 TTA-----AA-TGA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42403  8 +     53515 TTA-----AA-TGA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370334  8 -  26074798 TTA-----AA-TGG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7223  8 -     34880 TTA-----AA-TGG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66318  8 -     89041 TTA-----AA-TGG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1442  8 -      5494 tta-----aa-tca
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491409  8 -  27778364 CTA-----Aa-tga
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18242  8 +     27315 CTA-----AA-TGA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140233  8 -   4669795 TCA-----AA-TGA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43975  8 +     47900 TCA-----AA-TGA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43800  8 -     44860 TCA-----AA-TGA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43788  8 -    148725 TCA-----AA-TGA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25965  8 -     40656 TCA-----AA-TGA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5931  8 +     20796 TCA-----AA-TGA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11048  8 -     17524 TCA-----AA-TGA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26770  8 -     34525 TCA-----AA-TGA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10551  8 -     25376 TCA-----AA-TGA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363147  8 -  39242232 TCA-----AA-TGA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268863  8 +  21565898 TCA-----AA-TGA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31237  8 -     45857 TCA-----AA-TGA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26136  8 -     32606 TCA-----AA-TGA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2295  8 +      8499 TCA-----AA-TGA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24693  8 +     70610 TCA-----AA-TGA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21662  8 +     36323 TCA-----AA-TGA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12043  8 -     19938 CTA-----AA-GGA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29852  8 -     33796 TTA-----AA-TGG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4369  8 -     15404 TTA-----AA-TGG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8220  8 -     32913 TTA-----AA-TGA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18633  8 -     40346 TTA-----AA-TGA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18888  8 +    216457 TTA-----AA-TGA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18681  8 +     39636 TTA-----AA-TGA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238101  8 -   2543920 TTA-----AG-Tgc
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3275  8 +      5346 TCA-----AA-TGA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41758  8 -    112038 TTA-----AA-TGA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7329  8 +     34062 TTA-----AA-TGA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342553  8 +  18827391 TCA-----AA-TGA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9100  8 -     44032 TCA-----AA-TGA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303877  8 - 135778131 TCA-----AA-TGA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14014  8 +     15858 TTA-----AA-TGA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605590  8 -    839153 TTA-----AA-TGA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408306  8 -   2368649 TCA-----aa-tga
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378181  8 - 200372422 TCA-----AA-TGA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1730  8 -     84244 TCA-----AA-TGA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806423  7 +  53390261 TTA-----AAAT--
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2013  8 -      8242 TTA-----AA-TGA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43540  1 -     83289 C-------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 15
s Cricetulus_griseus.LT883664.1                          213113979  1 - 224834208 c-------------
i Cricetulus_griseus.LT883664.1                          I 3 I 146
s Crocidura_indochinensis.CroInd_scaffold_77846               6684  8 +     12657 TTA-----AA-TGA
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 6
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3523  8 +     87169 gta-----aa-aga
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644238  8 -   1526836 TTA-----AG-TGA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17558  8 +     50838 TTA-----AG-TGC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3536  8 +     36344 TTA-----AG-TGC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27334  8 +     75252 TTA-----AG-TGC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109388  8 -   2246927 ATA-----AA-TGG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291786  8 +  12879189 TTA-----AA-TGG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625023  8 -  35494412 TTA-----AA-TAA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864413  8 -  20541912 TCA-----AA-TGA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663698  8 -   1390856 CTA-----Aa-tga
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138486  8 -    198055 CTA-----AA-TGA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98091  8 -    115145 tta-----ag-tgc
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949715  8 -  37912305 TTA-----TG-TAA
i Dipodomys_ordii.KN672350.1                             C 0 I 4
s Dipodomys_stephensi.DipSte_scaffold_89095                   4650  8 -     10735 TTA-----TG-TAA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 4
s Dolichotis_patagonum.DolPat_scaffold_80628                  9584  8 +     14636 CTA-----AG-TGC
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62854159  8 - 111700974 TTA-----AA-TGA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5474  8 +     19438 cta-----aa-tga
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238968  8 -    607251 TTA-----AA-TAA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107772  8 -  10337057 TTA-----AA-TGT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30257  1 +    110024 c-------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 21
s Ellobius_talpinus.LOJH01026522.1                           12244  1 +     18970 g-------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 15
s Enhydra_lutris.KZ291758.1                               24915337  8 +  41312741 tca-----aa-aga
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578044  8 +  14770903 TTA-----AT-TGC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040566  8 -   4378816 CTA-----AA-TGA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374490  8 +  39960074 CTA-----AA-TGA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411276  8 -    498745 CTA-----AA-TGA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665343  8 +   7059049 TTA-----AG-TGA
i Erinaceus_europaeus.JH835339.1                         C 0 I 6
s Erythrocebus_patas.Contig38                               262080  8 +  21539334 TCA-----AA-TGA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64369  8 -    133382 TTA-----AA-TAA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4582  8 +      7672 TTA-----AA-TAA
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13983  8 -     24895 TTA-----AA-TGG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41692  8 -     70999 TTA-----AA-TGG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85654  8 +    112731 TTA-----AA-TGG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42223  8 +     68309 TTA-----AA-TGG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52549  8 -     65740 TTA-----AA-TGG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23178  8 -     75513 TTA-----AA-TGG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47375  8 -     97555 TTA-----AA-TGG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4100  8 +     30972 TTA-----AA-TGG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41820  8 -     52037 TTA-----AA-TGG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58222  8 -    111500 TTA-----AA-TGG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246039  8 - 206538554 GTA-----Aa-cga
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115825  8 - 205367284 GTA-----Aa-cga
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26926  8 -     30238 GTG-----AA-CGA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124245  2 -    137831 TC------------
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7790  2 +     22493 TC------------
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19857  2 -     32986 TC------------
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 382  8 -     28519 TAA-----AA-TGA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90661  8 -     95226 TTA-----AA-TGA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33731  8 -     36801 TTT-----AT-TGA
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5036  8 -      8343 TTA-----AA-TGA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254048  8 - 186649187 TTA-----AA-TGa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1222  8 -     78134 TTT-----AT-TGA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13908  8 -     40692 TTA-----AA-TGG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35310  8 +     49394 TTA-----AA-TGG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60178  8 -     66874 TTA-----AA-TGG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9052  8 -     42923 TTA-----AA-TGG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16052  8 -     53142 TTA-----AA-TGG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30010  8 -    327341 GTA-----AA-AGA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8419  8 +     48891 TTG-----AA-TGA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6319  8 +      6687 TTC-----AG-TGA
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6862  8 -     36432 TTA-----AA-TGA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                226  8 -      2730 tta-----aa-tct
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 52
s Hoolock_leuconedys.ctg274                                    142056  8 -    630532 TTA-----AA-TGA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68929  8 +     83186 GGA-----AA-AGA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71056  8 +    143317 TTA-----AG-TGC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5091  8 +     12352 TTA-----AA-TGA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12275  8 +     55766 TTA-----AA-TGA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051873  8 + 191637585 TTA-----AA-TGA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800751  8 +  11177569 TTA-----AA-TGA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3707  8 -    135385 TCA-----GG-TGC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386070  8 +   7955117 TTA-----AT-Tga
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1562  8 +     11955 tta-----aa-tgg
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2834  8 -     16823 TTA-----AA-TAA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238844  3 +   9596543 -----------tga
i Jaculus_jaculus.JH725527.1                             I 2 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65082  8 -     97402 TTA-----AA-TAA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42497  8 +    110728 TTA-----AA-TGG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62115  8 -     65777 TTA-----AT-TGC
i Lasiurus_borealis.LasBor_scaffold_16567                I 211 C 0
s Lemur_catta.scaffold_24                                 14758701  8 +  30322482 TTA-----AA-TGG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3410  8 -     13097 TTA-----AA-TGA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3164  8 +      5940 TTA-----AA-TGA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        2994  8 -      5717 TTA-----AA-TGA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9370  8 -     11567 TTA-----AA-TGA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10751  8 -     12945 TTA-----AA-TGA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8229  8 +     29618 TTA-----AA-TGG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8225  8 +     31569 TTA-----AA-TGG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8236  8 +     24756 TTA-----AA-TGG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8235  8 +     16388 TTA-----AA-TGG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812751  8 -   3914936 tta-----aa-aga
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17072 11 +     24238 ACAC-A-CAG-TGA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             334368  8 +    662738 TTA-----AA-TAA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333118  8 -   1826925 TCA-----AA-TGA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9810  2 +     19643 TC------------
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043467  2 -   6120653 tc------------
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080246  8 +  43346337 TTA-----AA-TGA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613886  8 +  59628241 tta-----aa-aga
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44502  8 -     61512 TCA-----AA-TGA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372164  8 -  60120075 TCA-----AA-TGA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24427  8 +     30207 TCA-----AA-TGA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21530  8 -     24934 TCA-----AA-TGA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24380  8 +     30527 TCA-----AA-TGA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35556  8 -     50087 TCA-----AA-TGA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45300  8 +     51645 TCA-----AA-TGA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414502  8 - 187317192 TCA-----Aa-tga
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398733  8 +  25927173 TCA-----AA-TGA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47905  8 -     62418 TCA-----AA-TGA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  443  8 +     14901 TCA-----AA-TGA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44377  8 +     59329 TCA-----AA-TGA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270285  8 +    668171 TCA-----AA-TGA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  561  8 +      1732 TCA-----AA-TGA
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2083  8 +     17132 TCA-----AA-TGA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222437  8 -    270270 CTA-----AA-TGA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321582  8 +  24302211 TCA-----AA-TGA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356414  8 -    752769 TCA-----AA-TGA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672770  8 -    737560 TTA-----AA-TGA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220054  8 +    317179 TTA-----AA-TGA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500290  8 +  40650429 TTA-----AT-TGA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149603  3 +    207569 aca-----------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 I 33
s Mellivora_capensis.MelCap_flattened_line_19308             25441  8 -     74585 TCA-----AA-AGA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49396  1 -    140813 C-------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 15
s Mesoplodon_bidens.MesBid_scaffold_6114                     80667  8 +     93471 TTA-----AA-TAA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9536  8 +     17804 TTA-----AA-TGA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10038  8 -     12984 TTA-----AA-TGA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18352  8 -     26561 TTA-----AA-TGA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983839  8 +  93316391 TTA-----AA-TGG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45205  8 +    145209 TTC-----AA-TGA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184358  8 +    200668 TTA-----AA-TGA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362461  8 -   8254450 TTa-----aa-tga
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41360  8 -     48117 TTA-----AA-TGA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21590  8 -     27822 TCA-----AA-TGA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7758  8 +     27589 TTA-----AA-AGA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51628  8 -     62432 TTA-----AA-TGG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352766  8 +    437263 TTA-----AA-TAA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178523  8 +    366855 TTA-----AA-TGA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24780  8 -     82753 TTA-----AA-TGA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17762  8 -     63510 GTA-----AA-AGA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38402  8 +     47283 TTA-----AT-TGC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592431  1 + 120012414 c-------------
i Mus_caroli.LT608237.1                                  C 0 I 12
s Mus_musculus.chr8                                       41686816  1 + 129401213 c-------------
i Mus_musculus.chr8                                      C 0 I 12
s Mus_pahari.LT608297.1                                   58216681  1 +  89631738 c-------------
i Mus_pahari.LT608297.1                                  C 0 I 14
s Mus_spretus.CM004101.1                                  39496112  1 + 130317789 c-------------
i Mus_spretus.CM004101.1                                 C 0 I 12
s Muscardinus_avellanarius.MusAve_scaffold_12866             82560  8 -     86153 TTT-----AC-TGA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354369  8 +  14710649 Tca-----ga-aga
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792652  8 +  10118263 TTA-----AT-TGC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386812  8 +   6019432 TTA-----AT-TGC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382631  8 +   4330536 TTA-----GT-TGC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1459  8 +     18357 TTA-----AT-TGC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118981  8 +    130748 TTA-----AC-TGT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945464  8 +   3037898 tta-----ag-gca
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28231  8 +     34575 TCA-----AA-TGA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468353  8 -  31847680 tta-----aa-aga
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226936  8 -   7148211 TTA-----AA-TAA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127480  8 -    149072 GTA-----AG-TGA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52984  8 -    132029 TTA-----AA-TGA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9079  8 -     16345 TTA-----AA-TGA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14964  8 +     22201 TTA-----AA-TGA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413185  8 -  22158432 TTA-----AA-TGA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25362  8 -     54323 TTA-----AA-TGA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197479  8 +   9404916 tta-----aa-aga
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635837  2 + 196305487 TC------------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2595  2 -      3937 TC------------
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564102  2 - 199412804 TC------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550435 13 -   3988456 GTACTATCAT-AGA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11054346  1 -  11899542 -------------C
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450950  8 +   2017862 tta-----aa-aga
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435545  8 -    630418 TTA-----AA-TGa
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13545  8 +    150152 TTA-----AA-TGa
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92040  1 -    140218 C-------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 27
s Onychomys_torridus.OnyTor_scaffold_28377                    2932  1 -     41509 C-------------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 15
s Orcinus_orca.KB316932.1                                  8096220  8 +  10937097 TTA-----AA-TAA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12885  8 -     14239 TGA-----AA-TGA
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102909 11 - 174332312 ACAC-A-CAG-TGA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38526  8 +    559221 tta-----aa-aga
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39406  2 -     51505 TC------------
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352409  2 +   1103335 tc------------
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403539  8 -  44047080 TCG-----AA-TGA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4058  8 +     17875 TCG-----AA-TGA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472077  8 - 189151597 TTA-----AA-TGA
i Pan_troglodytes.CM009242.2                             I 84 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23751  8 -    230217 GTA-----AA-CGA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461077  8 -  18783137 GTA-----Aa-cga
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971734  8 +   8748460 GTA-----Aa-cga
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614977  8 +   2937107 TTA-----AA-TGA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242415  8 - 183742232 TCA-----AA-TGA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8877  8 +     21308 TCA-----AA-TGA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291451  8 -  20919399 TCA-----AA-TGA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21525  8 -     27687 TCA-----AA-TGA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14671  8 +     16796 TCA-----AA-TGA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21482  8 -     23640 TCA-----AA-TGA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14346  8 +     78924 GTA-----AA-AGA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25616  2 +     31479 TT------------
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17985  2 -     24908 TT------------
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1046  8 +      9367 TTA-----TG-TAA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 4
s Peromyscus_maniculatus.KI615324.1                         246130  1 +  18517816 c-------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 15
s Phocoena_phocoena.PhoPho_flattened_line_46867              12062  8 -     15039 TTA-----AA-TAA
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1689  8 +     55023 TCA-----AA-TGA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1239  8 -     89929 TCA-----AA-TGA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1828  8 +     40849 TCA-----AA-TGA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253492  8 +  14605196 TCA-----aa-tga
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2984  8 +     22231 TTA-----At-tgc
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64134  8 +    207309 TTA-----AA-TGA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5227  8 -     25401 TTA-----AA-TGA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30970  8 +     58159 TTA-----AA-TGA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31246  8 +     63561 TTA-----AA-TGA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31006  8 +     51148 TTA-----AA-TGA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555976  8 -   4542175 TTA-----AA-TGA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30990  8 +     51125 TTA-----AA-TGA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4152  8 -      8168 TTA-----AA-TAA
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7388  8 +     39866 TTA-----AA-TGA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2472  8 -      9282 TTA-----AA-TGA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41876  8 -     87950 TTA-----AA-TGA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42270  8 -     88961 TTA-----AA-TGA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6968  8 -     39403 TTA-----AA-TGA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41919  8 +     87928 TTA-----AA-TGA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6965  8 -     60166 TTA-----AA-TGA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13902  8 -     67232 TTA-----AA-TGA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41818  8 -     90634 TTA-----AA-TGA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43285  8 +     89403 TTA-----AA-TGA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177201  8 - 189387572 TTA-----AA-TGa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192018  8 -   9816681 TTA-----AA-TGA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26814  8 +     69807 TCA-----AA-TGA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44010  8 -     80239 TCA-----AA-TGA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2698  8 +      3019 TTC-----AG-TGA
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981856  8 +   4620579 TTA-----AA-Tgg
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565324  8 -   2598838 TTA-----AA-TGG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           2960  8 -      7103 tta-----aa-tgg
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3557  8 -     11706 TTA-----AA-Tgg
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7293  8 -     30655 tta-----aa-tgg
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33618  8 +     46564 TTA-----AA-TGG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93889  8 -     98465 tta-----aa-tgg
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7526  8 +     35169 tta-----aa-tgg
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36737  1 +     52041 c-------------
i Psammomys_obesus.NESX01036366.1                        C 0 I 15
s Pteronotus_parnellii.KE847780.1                            51408  8 -     66298 TTA-----aa-tga
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3940  8 -     18639 TGA-----AA-AGA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840122  8 -  28871421 CTA-----Aa-tga
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536633  8 -   4952924 CTA-----Aa-tga
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098391  8 +  38429054 GTG-----Aa-cga
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26188  8 +     91421 TCA-----AA-TGG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152680  8 -   7812017 TCA-----AA-TGG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7055  8 +     72585 TCA-----AA-TGG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52464  8 +     55069 TTA-----AA-TGA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022028  1 -  90668790 c-------------
i Rattus_norvegicus.chr16                                C 0 I 15
s Rhinolophus_sinicus.LVEH01000134.1                       2914019  8 +   3329780 taa-----aa-tga
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              760  8 +      7119 TCA-----AA-TGA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121368  8 + 195417433 TCA-----AA-TGa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235610  8 -   7961872 TCA-----AA-TGA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74031  8 -    116970 cta-----aa-tga
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3273  8 +     27962 TCA-----AA-TGA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3168  8 +      6077 TTA-----AA-TGA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3258  8 +      5971 TTA-----AA-TGA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3180  8 +      5932 TTA-----AA-TGA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1522  8 -      4390 TTA-----AA-TGA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390958  8 - 209938924 TCA-----AA-TGA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3129  8 +      5979 TTA-----AA-TGA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3892  8 -      4301 TTA-----AA-TGA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7131  8 +     16473 TTA-----AA-TGA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108295  8 + 121099817 TTG-----AA-tga
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29862  8 -     47369 TTG-----AA-TGA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30248  8 -     79414 TTG-----AA-TGA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26939  8 -     34454 TTG-----AA-TGA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14342  8 -     22428 TTG-----AA-TGA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29494  8 -     47109 TTG-----AA-TGA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237552  8 +   5703754 TTA-----AA-TGG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7142  8 +     21866 TTA-----AA-TGG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115237  6 +    313613 TTA-----AA-T--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24507  8 +     27374 TCA-----AA-TGA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28021  8 +     58920 TCA-----AA-TGA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14517  8 -     45317 TCA-----AA-TGA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22176  8 -     42441 TCA-----AA-TGA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24854  8 -     29113 TCA-----AA-TGA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27928  8 -     48123 TCA-----AA-TGA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48513  1 +     77746 C-------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 15
s Solenodon_paradoxus.SolPar_flattened_line_126            1857563  7 -   1910179 TTT------A-TGG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670592  8 +  18376816 TTA-----AA-TGA
i Sorex_araneus.JH798187.1                               C 0 I 6
s Spermophilus_dauricus.KZ294078.1                         1867650  8 +   3870691 TTA-----AT-TGA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5930  8 -     97271 TAA-----AA-AGA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124166  8 +    196729 GTA-----AC-AGA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643063  8 +  69701581 TTA-----AA-TGA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390445  8 +   1523678 TTA-----AA-TGA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13389  7 +     22964 -ta-----aa-tga
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1971  8 +      5583 TTA-----GC-TGA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190856  8 +    199430 CTA-----AA-TGA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104813  8 -    539355 CTA-----AA-TGA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6137  8 +      6850 TTA-----AA-TCA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6188  8 +     20590 tta-----aa-tca
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352401  8 - 186847797 TCA-----AA-TGA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19076  8 -     31044 TTA-----AA-TGA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479434  8 -    610378 TCA-----AA-TGA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20053  8 +     26378 TCA-----AA-TGA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32731  8 -     78344 TCA-----AA-TGA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19378  8 +     25722 TCA-----AA-TGA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27683  8 -     62838 TCA-----AA-TGA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27729  8 +     46913 TCA-----AA-TGA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8538  8 -     28527 TCA-----AA-TGA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29620  8 -     64340 TCA-----AA-TGA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27657  8 -     63452 TCA-----AA-TGA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9102  8 +     22490 TCA-----AA-TGA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2528  8 -      6147 TCA-----AA-TGA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9433  8 -     13050 TCA-----AA-TGA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254673  8 -   6242583 TCA-----AA-TGA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         697  8 +     19340 TCA-----AA-TGA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172745  8 -    200418 TTA-----AA-TGA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479705  8 -  10818551 TTG-----Ag-tga
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833372  8 -   4065304 TTA-----AA-Tca
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7361  8 -     70247 TTA-----AA-TCA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360963  8 -  33153633 TTA-----AA-TAA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2960  6 -     21056 TTA-----AA-T--
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181108  8 +   5085361 tta-----aa-aga
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24500  8 -     30710 TTA-----AA-TGG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23407  8 -    147434 TTA-----AA-TGG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75589  8 +   5488506 TTA-----AA-tga
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104248  8 -    112863 TTA-----AA-AGA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173440  8 -    224448 TTA-----AT-TGA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28145  8 -     86975 TTA-----AA-AGA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       443  1 -       753 -----------c--
i Zapus_hudsonius.ZapHud_scaffold_533409                 I 2 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             371  8 +      1812 TTA-----AA-TAA
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Microtus_ochrogaster.CM001695.1                         15961703  8 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17428487 52 +  29670104 I
e Hipposideros_armiger.JXIK01000431.1                      1548393 4980 -   1711038 I
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4742 3 +     36723 CAG
s Acinonyx_jubatus.LLWD01001279.1                           812138 3 +   1699592 cag
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414603 3 +  29979442 cag
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214918 1 +    347723 c--
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17336 1 -     61208 c--
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47058 3 +     53615 CAG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43019 3 +     44087 CAG
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15644 3 -     21945 CAG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17327 3 +     32033 CAG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71499 3 -     84148 CAG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43738 3 -     78289 CAG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43177 3 +     55831 CAG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41627 3 -     64179 CAG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23261 3 -     24835 CAG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40252 3 +     45454 CAG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45898 3 +     70886 CAG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8074 3 +     30854 CAG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32210 3 +     42133 CAG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584590 2 +   2318259 CA-
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176400 2 -    412891 CA-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 4
s Antilocapra_americana.AntAmePen_scaffold_21030             49705 2 -     68529 CA-
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     453 3 +     17741 CAG
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1078 3 -     15923 TAG
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1353 3 -     16391 CAG
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                913 3 -     17186 CAG
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15301 1 -     32367 C--
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18831 1 -     45910 --T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4676 2 -     15198 CA-
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 2
s Ateles_geoffroyi_b.tarseq_1536                               273961 3 +  21539123 CAG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10128 3 +     48076 CAG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5265 3 -     28759 CAG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32818 3 +     44353 CAG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48188 3 -     71267 CAG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22247 3 -     33135 CAG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5448 3 +     11645 CAG
i Avahi_laniger.k141_2756659                             C 0 I 25
s Avahi_peyrierasi.k141_1823318                               5454 3 -     19611 cag
i Avahi_peyrierasi.k141_1823318                          C 0 I 29
s Balaenoptera_acutorostrata.KI537508.1                    7956499 2 -  23207421 ca-
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3708 2 -      4711 ca-
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85599 2 +    124022 CA-
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21131 2 +    288883 CA-
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355517 2 +  48749331 CA-
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754085 2 +   1948126 CA-
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544224 2 -  45695690 CA-
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529249 2 -   4408762 CA-
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7135 3 +     28062 CAG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42429 3 -     91139 CAG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19955 3 +     95584 CAG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19868 3 +    119600 CAG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9435 3 +     18648 CAG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8974 3 -     13885 CAG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1040 3 -      8861 CAG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453433 3 + 189096842 CAG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                955 3 +      8664 CAG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630263 2 +  17673402 CA-
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664549 2 +   7040546 CA-
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208209 2 +   1652518 CA-
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504625 3 +  60362399 TGG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8261 3 -     23171 TGG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221604 3 +   9314153 tgg
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614739 3 +  59632846 tgg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106320 3 -  63665305 tgg
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408320 2 -  46296322 CA-
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590593 2 +  44709034 CA-
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    777 1 -      1880 C--
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269521 3 +    496798 cac
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                618 2 -      1021 CA-
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 I 4
s Castor_canadensis.CasCan_scaffold_39952                    26938 1 -     39886 A--
i Castor_canadensis.CasCan_scaffold_39952                I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78804 2 -    217609 GA-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995657 1 +  23392119 C--
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999099 1 +  23407841 C--
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62180 1 -     66877 C--
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4353 3 -     12580 CAA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42411 3 +     53515 CAG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370342 3 -  26074798 CAG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7231 3 -     34880 CAG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66326 3 -     89041 CAG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1450 3 -      5494 cac
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491417 3 -  27778364 cag
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18250 3 +     27315 CAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140241 3 -   4669795 Cag
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43983 3 +     47900 CAG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43808 3 -     44860 CAG
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43796 3 -    148725 CAG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25973 3 -     40656 CAG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5939 3 +     20796 CAG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11056 3 -     17524 CAG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26778 3 -     34525 CAG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10559 3 -     25376 CAG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363155 3 -  39242232 CAG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268871 3 +  21565898 CAG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31245 3 -     45857 CAG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26144 3 -     32606 CAG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2303 3 +      8499 CAG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24701 3 +     70610 CAG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21670 3 +     36323 CAG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12051 3 -     19938 CAG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29860 3 -     33796 TAG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4377 3 -     15404 CAG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8228 3 -     32913 TGG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18641 3 -     40346 TGG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18896 3 +    216457 TGG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18689 3 +     39636 TGG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238109 1 -   2543920 c--
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3283 3 +      5346 CAG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41766 3 -    112038 CAG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7337 3 +     34062 CAG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342561 3 +  18827391 CAG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9108 3 -     44032 CAG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303885 3 - 135778131 Cag
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14022 3 +     15858 CAG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605598 3 -    839153 CAG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408314 3 -   2368649 cag
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378189 3 - 200372422 CAG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1738 3 -     84244 CAG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2021 3 -      8242 CAG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6698 3 +     12657 CAC
i Crocidura_indochinensis.CroInd_scaffold_77846          I 6 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3531 3 +     87169 cag
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644246 1 -   1526836 C--
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17566 1 +     50838 C--
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3544 1 +     36344 C--
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27342 1 +     75252 C--
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109396 3 -   2246927 CAG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291794 3 +  12879189 CAG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625031 2 -  35494412 CA-
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864421 2 -  20541912 CC-
i Desmodus_rotundus.KZ672289.1                           C 0 I 4
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663706 3 -   1390856 cag
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138494 3 -    198055 CAG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98099 1 -    115145 c--
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949727 1 -  37912305 c--
i Dipodomys_ordii.KN672350.1                             I 4 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4662 1 -     10735 T--
i Dipodomys_stephensi.DipSte_scaffold_89095              I 4 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9592 1 +     14636 c--
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62854167 3 - 111700974 CGG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5482 3 +     19438 cac
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238976 1 -    607251 C--
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107780 3 -  10337057 CAG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915345 1 +  41312741 c--
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578052 3 +  14770903 CAG
i Eptesicus_fuscus.JH977646.1                            C 0 I 40
s Equus_asinus.JREZ01000139.1                              3040574 3 -   4378816 CAG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374498 3 +  39960074 CAG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411284 3 -    498745 CAG
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               262088 3 +  21539334 CAG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64377 2 -    133382 CA-
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4590 2 +      7672 CA-
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13991 3 -     24895 CAG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41700 3 -     70999 CAG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85662 3 +    112731 CAG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42231 3 +     68309 CAG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52557 3 -     65740 CAG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23186 3 -     75513 CAG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47383 3 -     97555 CAG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4108 3 +     30972 CAG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41828 3 -     52037 CAG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58230 3 -    111500 CAG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246047 3 - 206538554 cag
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115833 3 - 205367284 cag
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26934 3 -     30238 CAG
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124247 1 -    137831 --T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7792 1 +     22493 --T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19859 1 -     32986 --T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 390 3 -     28519 CAG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90669 2 -     95226 ta-
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33739 1 -     36801 C--
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5044 3 -      8343 CAG
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254056 3 - 186649187 cag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1230 1 -     78134 G--
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13916 3 -     40692 CAG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35318 3 +     49394 CAG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60186 3 -     66874 CAG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9060 3 -     42923 CAG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16060 3 -     53142 CAG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30018 3 -    327341 CAG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8427 2 +     48891 CA-
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6327 3 +      6687 CAC
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6870 2 -     36432 CA-
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553373 3 -   1711038 cac
i Hipposideros_armiger.JXIK01000431.1                    I 4980 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                286 3 -      2730 ctc
i Hipposideros_galeritus.HipGal_scaffold_164997          I 52 C 0
s Hoolock_leuconedys.ctg274                                    142064 3 -    630532 CAG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68937 1 +     83186 C--
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71064 1 +    143317 c--
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5099 3 +     12352 CAG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12283 3 +     55766 CAG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051881 3 + 191637585 CAG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800759 3 +  11177569 CAG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3715 1 -    135385 C--
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386078 1 +   7955117 c--
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1570 3 +     11955 cag
i Indri_indri.k141_2415743                               C 0 I 50
s Inia_geoffrensis.IniGeo_flattened_line_69447                2842 2 -     16823 CA-
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238847 1 +   9596543 c--
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65090 2 -     97402 CA-
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42505 3 +    110728 CAG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62123 3 -     65777 CAG
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 47
s Lemur_catta.scaffold_24                                 14758709 3 +  30322482 CAG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3418 3 -     13097 CAG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3172 3 +      5940 CAG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3002 3 -      5717 CAG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9378 3 -     11567 CAG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10759 3 -     12945 CAC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8237 3 +     29618 CAG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8233 3 +     31569 CAG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8244 3 +     24756 CAG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8243 3 +     16388 CAG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812759 1 -   3914936 c--
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17083 1 +     24238 T--
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             334376 2 +    662738 CA-
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333126 3 -   1826925 CAG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9812 1 +     19643 --T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043469 1 -   6120653 --t
i Loris_tardigradus.ctg83                                C 0 I 6
s Loxodonta_africana.GL010049.1                           39080254 3 +  43346337 CAG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613894 3 +  59628241 tgg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44510 3 -     61512 CAG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372172 3 -  60120075 CAG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24435 3 +     30207 CAG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21538 3 -     24934 CAG
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24388 3 +     30527 CAG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35564 3 -     50087 CAG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45308 3 +     51645 CAG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414510 3 - 187317192 cag
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398741 3 +  25927173 Cag
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47913 3 -     62418 CAG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  451 3 +     14901 CAG
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44385 3 +     59329 CAG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270293 3 +    668171 CAG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  569 3 +      1732 CAG
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2091 3 +     17132 CAG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222445 3 -    270270 CAA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321590 3 +  24302211 CAG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356422 3 -    752769 CAG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672778 3 -    737560 CAA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220062 3 +    317179 CAA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500298 1 +  40650429 C--
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25449 1 -     74585 C--
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80675 2 +     93471 CA-
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9544 3 +     17804 CAG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10046 3 -     12984 CAG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18360 3 -     26561 CAG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983847 3 +  93316391 cag
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45213 3 +    145209 CAG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184366 2 +    200668 CA-
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 4
s Miniopterus_natalensis.LDJU01000034.1                    6362469 3 -   8254450 cag
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 8
s Miniopterus_schreibersii.MinSch_scaffold_23309             41368 3 -     48117 CAG
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 16
s Miopithecus_ogouensis.k141_1534655                         21598 3 -     27822 CAG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7766 1 +     27589 C--
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51636 3 -     62432 CAG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352774 2 +    437263 CA-
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178531 2 +    366855 CA-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 4
s Moschus_moschiferus.MosMos_scaffold_13123                  24788 2 -     82753 CA-
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17770 3 -     63510 CAG
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38410 3 +     47283 CAG
i Murina_feae.MurFea_scaffold_17764                      C 0 I 38
s Muscardinus_avellanarius.MusAve_scaffold_12866             82568 1 -     86153 C--
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354377 1 +  14710649 c--
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792660 3 +  10118263 CAG
i Myotis_brandtii.KE162005.1                             C 0 I 40
s Myotis_davidii.KB100139.1                                4386820 3 +   6019432 CAG
i Myotis_davidii.KB100139.1                              C 0 I 40
s Myotis_lucifugus.GL429869.1                               382639 3 +   4330536 CAG
i Myotis_lucifugus.GL429869.1                            C 0 I 40
s Myotis_myotis.MyoMyo_scaffold_66571                         1467 3 +     18357 CAG
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 40
s Nannospalax_galili.KL204047.1                             945472 1 +   3037898 c--
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28239 3 +     34575 CAG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468361 1 -  31847680 c--
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226944 2 -   7148211 CA-
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127488 2 -    149072 CA-
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           52992 3 -    132029 CAG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9087 3 -     16345 CAG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14972 3 +     22201 CAG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413193 3 -  22158432 CAG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25370 3 -     54323 CAG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197487 3 +   9404916 tgg
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635839 1 + 196305487 --T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2597 1 -      3937 --T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564104 1 - 199412804 --T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550448 1 -   3988456 T--
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11054347 1 -  11899542 C--
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450958 1 +   2017862 c--
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435553 2 -    630418 ca-
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13553 2 +    150152 ca-
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8096228 2 +  10937097 CA-
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12893 3 -     14239 CAG
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102920 1 - 174332312 T--
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38534 3 +    559221 tcg
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39408 1 -     51505 --T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352411 1 +   1103335 --t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403547 2 -  44047080 CA-
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4066 2 +     17875 CA-
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472085 3 - 189151597 Cag
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23759 3 -    230217 CAG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461085 3 -  18783137 cag
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971742 3 +   8748460 cag
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614985 2 +   2937107 CA-
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242423 3 - 183742232 Cag
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8885 3 +     21308 CAG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291459 3 -  20919399 CAG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21533 3 -     27687 CAG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14679 3 +     16796 CAG
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21490 3 -     23640 CAG
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14354 3 +     78924 CAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25618 1 +     31479 --T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17987 1 -     24908 --T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1058 1 +      9367 T--
i Perognathus_longimembris.PerPac_flattened_line_89005   I 4 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12070 2 -     15039 CA-
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1697 3 +     55023 CAG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1247 3 -     89929 CAG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1836 3 +     40849 CAG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253500 3 +  14605196 cag
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             2992 3 +     22231 tag
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 40
s Pithecia_albicans.k141_1239476                             64142 3 +    207309 CAG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5235 3 -     25401 CAG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30978 3 +     58159 CAG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31254 3 +     63561 CAG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31014 3 +     51148 CAG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555984 3 -   4542175 CAG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           30998 3 +     51125 CAG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4160 2 -      8168 CA-
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7396 3 +     39866 CGG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2480 3 -      9282 CGG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41884 3 -     87950 CGG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42278 3 -     88961 CGG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6976 3 -     39403 CGG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41927 3 +     87928 CGG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6973 3 -     60166 CGG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13910 3 -     67232 CGG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41826 3 -     90634 CGG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43293 3 +     89403 CGG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177209 3 - 189387572 cag
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192026 3 -   9816681 CAG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26822 3 +     69807 CAG
i Presbytis_comata.k141_1230337                          C 0 I 6
s Presbytis_mitrata.k141_584736                              44018 1 -     80239 C--
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2706 3 +      3019 CAC
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981864 3 +   4620579 cag
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565332 3 -   2598838 cag
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 37
s Propithecus_coronatus.k141_209299                           2968 3 -      7103 cag
i Propithecus_coronatus.k141_209299                      C 0 I 39
s Propithecus_diadema.k141_153680                             3565 3 -     11706 cag
i Propithecus_diadema.k141_153680                        C 0 I 39
s Propithecus_edwardsi.k141_635656                            7301 3 -     30655 cag
i Propithecus_edwardsi.k141_635656                       C 0 I 41
s Propithecus_perrieri.k141_1496898                          33626 3 +     46564 CAG
i Propithecus_perrieri.k141_1496898                      C 0 I 29
s Propithecus_tattersalli.k141_1127767                       93897 3 -     98465 cag
i Propithecus_tattersalli.k141_1127767                   C 0 I 37
s Propithecus_verreauxi.k141_1047036                          7534 3 +     35169 cag
i Propithecus_verreauxi.k141_1047036                     C 0 I 39
s Pteronotus_parnellii.KE847780.1                            51416 2 -     66298 ca-
i Pteronotus_parnellii.KE847780.1                        C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3948 1 -     18639 C--
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840130 3 -  28871421 caa
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536641 3 -   4952924 caa
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098399 3 +  38429054 cag
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26196 3 +     91421 CAG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152688 3 -   7812017 CAG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7063 3 +     72585 CAG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52472 2 +     55069 CA-
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914027 3 +   3329780 cag
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              768 3 +      7119 CAG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121376 3 + 195417433 cag
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235618 3 -   7961872 CAG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74039 3 -    116970 caa
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3281 3 +     27962 CAG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3176 3 +      6077 CAG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3266 3 +      5971 CAG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3188 3 +      5932 CAG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1530 3 -      4390 CAG
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390966 3 - 209938924 CAG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3137 3 +      5979 CAG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3900 3 -      4301 CAG
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7139 2 +     16473 CA-
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108303 3 + 121099817 cag
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29870 3 -     47369 CAG
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30256 3 -     79414 CAG
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26947 3 -     34454 CAG
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14350 3 -     22428 CAG
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29502 3 -     47109 CAG
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237560 3 +   5703754 CAG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7150 3 +     21866 CAG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         24515 3 +     27374 CAG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28029 3 +     58920 CAG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14525 3 -     45317 CAG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22184 3 -     42441 CAG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24862 3 -     29113 CAG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27936 3 -     48123 CAG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857570 3 -   1910179 CAG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670606 3 +  18376816 cac
i Sorex_araneus.JH798187.1                               I 6 C 0
s Spermophilus_dauricus.KZ294078.1                         1867658 1 +   3870691 C--
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5938 1 -     97271 C--
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124174 3 +    196729 CAG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643071 2 +  69701581 GA-
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390453 3 +   1523678 CAG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13396 1 +     22964 c--
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190864 3 +    199430 CAG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104821 3 -    539355 CAG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6145 3 +      6850 CAC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6196 3 +     20590 cac
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352409 3 - 186847797 CAG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19084 3 -     31044 CAG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479442 1 -    610378 C--
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_1189070                        20061 3 +     26378 CAG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32739 3 -     78344 CAG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19386 3 +     25722 CAG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27691 3 -     62838 CAG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27737 3 +     46913 CAG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8546 3 -     28527 CAG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29628 3 -     64340 CAG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27665 3 -     63452 CAG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9110 3 +     22490 CAG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2536 3 -      6147 CAG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9441 3 -     13050 CAG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254681 3 -   6242583 CAG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         705 3 +     19340 CAG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172753 2 -    200418 AA-
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479713 3 -  10818551 cag
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833380 3 -   4065304 cac
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7369 3 -     70247 CAC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360971 2 -  33153633 CA-
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Ursus_maritimus.KK499267.1                                181116 3 +   5085361 cag
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24508 3 -     30710 CAG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23415 3 -    147434 CAG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75597 2 +   5488506 ca-
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104256 3 -    112863 TAG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173448 1 -    224448 C--
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28153 1 -     86975 C--
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             379 2 +      1812 CA-
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Erinaceus_europaeus.JH835339.1                           3665351 6 +   7059049 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Zapus_hudsonius.ZapHud_scaffold_533409                       444 0 -       753 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    2966 0 -     21056 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                1979 0 +      5583 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    48514 15 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    115243 0 +    313613 C
e Rattus_norvegicus.chr16                                 37022029 15 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            36738 15 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         246131 15 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    2933 15 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    92041 27 -    140218 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118989 0 +    130748 C
e Mus_spretus.CM004101.1                                  39496113 12 + 130317789 I
e Mus_pahari.LT608297.1                                   58216682 14 +  89631738 I
e Mus_musculus.chr8                                       41686817 12 + 129401213 I
e Mus_caroli.LT608237.1                                   35592432 12 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15961703 8 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17428487 52 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 49397 15 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       149606 33 +    207569 I
e Ellobius_talpinus.LOJH01026522.1                           12245 15 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          30258 21 +    110024 I
e Cricetulus_griseus.LT883664.1                          213113980 146 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 43541 15 -     83289 I
e Condylura_cristata.JH655891.1                           35806430 0 +  53390261 C
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     24389 32 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4745 1 +     36723 A
s Acinonyx_jubatus.LLWD01001279.1                           812141 1 +   1699592 a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414606 1 +  29979442 a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47061 1 +     53615 A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43022 1 +     44087 A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15647 1 -     21945 A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17330 1 +     32033 A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18832 1 -     45910 G
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Avahi_laniger.k141_2756659                                  5476 1 +     11645 a
i Avahi_laniger.k141_2756659                             I 25 C 0
s Avahi_peyrierasi.k141_1823318                               5486 1 -     19611 a
i Avahi_peyrierasi.k141_1823318                          I 29 C 0
s CanFam4.chr16                                           42504628 1 +  60362399 A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8264 1 -     23171 A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221607 1 +   9314153 a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614742 1 +  59632846 a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106323 1 -  63665305 a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269524 1 +    496798 a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1453 1 -      5494 a
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491420 1 -  27778364 a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18253 1 +     27315 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140244 1 -   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43986 1 +     47900 A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43811 1 -     44860 A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43799 1 -    148725 A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25976 1 -     40656 A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5942 1 +     20796 A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11059 1 -     17524 A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26781 1 -     34525 A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10562 1 -     25376 A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363158 1 -  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268874 1 +  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31248 1 -     45857 A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26147 1 -     32606 A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2306 1 +      8499 A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24704 1 +     70610 A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21673 1 +     36323 A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12054 1 -     19938 A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Chlorocebus_aethiops.ctg25                                342564 1 +  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9111 1 -     44032 A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303888 1 - 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14025 1 +     15858 A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605601 1 -    839153 A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408317 1 -   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378192 1 - 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1741 1 -     84244 A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2024 1 -      8242 A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6701 1 +     12657 A
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3534 1 +     87169 a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 58
s Dasypus_novemcinctus.JH564415.1                          2109399 1 -   2246927 A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291797 1 +  12879189 A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663709 1 -   1390856 a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138497 1 -    198055 A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Echinops_telfairi.JH980293.1                            62854170 1 - 111700974 G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5485 1 +     19438 a
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107783 1 -  10337057 A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578095 1 +  14770903 a
i Eptesicus_fuscus.JH977646.1                            I 40 C 0
s Equus_asinus.JREZ01000139.1                              3040577 1 -   4378816 G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374501 1 +  39960074 G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411287 1 -    498745 G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               262091 1 +  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13994 1 -     24895 A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41703 1 -     70999 A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85665 1 +    112731 A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42234 1 +     68309 A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52560 1 -     65740 A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23189 1 -     75513 A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47386 1 -     97555 A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4111 1 +     30972 A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41831 1 -     52037 A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58233 1 -    111500 A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246050 1 - 206538554 a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115836 1 - 205367284 a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26937 1 -     30238 A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124248 1 -    137831 A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7793 1 +     22493 A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19860 1 -     32986 A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 393 1 -     28519 G
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Gorilla_beringei.k141_3358147                               5047 1 -      8343 A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254059 1 - 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13919 1 -     40692 A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35321 1 +     49394 A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60189 1 -     66874 A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9063 1 -     42923 A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16063 1 -     53142 A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30021 1 -    327341 A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553376 1 -   1711038 a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                289 1 -      2730 a
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142067 1 -    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               5102 1 +     12352 A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12286 1 +     55766 A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051884 1 + 191637585 A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800762 1 +  11177569 A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_2415743                                    1623 1 +     11955 a
i Indri_indri.k141_2415743                               I 50 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    31407 1 -     49555 a
i Lasiurus_borealis.LasBor_scaffold_26245                I 266 C 0
s Lemur_catta.scaffold_24                                 14758712 1 +  30322482 A
i Lemur_catta.scaffold_24                                C 0 C 0
s Lophocebus_aterrimus.ctg367                               333129 1 -   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9813 1 +     19643 A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043476 1 -   6120653 a
i Loris_tardigradus.ctg83                                I 6 C 0
s Lycaon_pictus.CM007581.1                                41613897 1 +  59628241 a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44513 1 -     61512 A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372175 1 -  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24438 1 +     30207 A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21541 1 -     24934 A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24391 1 +     30527 A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35567 1 -     50087 A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45311 1 +     51645 A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414513 1 - 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398744 1 +  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47916 1 -     62418 A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  454 1 +     14901 A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44388 1 +     59329 A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270296 1 +    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  572 1 +      1732 A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2094 1 +     17132 A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222448 1 -    270270 A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321593 1 +  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356425 1 -    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672781 1 -    737560 A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220065 1 +    317179 A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149639 1 +    207569 a
i Megaderma_lyra.MegLyr_scaffold_4542                    I 33 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45216 1 +    145209 G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362480 1 -   8254450 a
i Miniopterus_natalensis.LDJU01000034.1                  I 8 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41387 1 -     48117 A
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 16 C 0
s Miopithecus_ogouensis.k141_1534655                         21601 1 -     27822 A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17773 1 -     63510 A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38451 1 +     47283 G
i Murina_feae.MurFea_scaffold_17764                      I 38 C 0
s Myotis_brandtii.KE162005.1                               9792703 1 +  10118263 a
i Myotis_brandtii.KE162005.1                             I 40 I 30
s Myotis_davidii.KB100139.1                                4386863 1 +   6019432 a
i Myotis_davidii.KB100139.1                              I 40 C 0
s Myotis_lucifugus.GL429869.1                               382682 1 +   4330536 a
i Myotis_lucifugus.GL429869.1                            I 40 I 8
s Myotis_myotis.MyoMyo_scaffold_66571                         1510 1 +     18357 a
i Myotis_myotis.MyoMyo_scaffold_66571                    I 40 C 0
s Nasalis_larvatus.k141_1350636                              28242 1 +     34575 A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           52995 1 -    132029 A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9090 1 -     16345 A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14975 1 +     22201 A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413196 1 -  22158432 A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25373 1 -     54323 A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197490 1 +   9404916 a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635840 1 + 196305487 A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2598 1 -      3937 A
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564105 1 - 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12896 1 -     14239 A
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38537 1 +    559221 a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39409 1 -     51505 A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352412 1 +   1103335 a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1472088 1 - 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23762 1 -    230217 A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461088 1 -  18783137 a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971745 1 +   8748460 a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   242426 1 - 183742232 a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8888 1 +     21308 A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291462 1 -  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21536 1 -     27687 A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14682 1 +     16796 A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21493 1 -     23640 A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14357 1 +     78924 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25619 1 +     31479 A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17988 1 -     24908 A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2704958                            1700 1 +     55023 A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1250 1 -     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1839 1 +     40849 A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253503 1 +  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3035 1 +     22231 a
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 40 C 0
s Pongo_abelii.CM009266.2                                   177212 1 - 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192029 1 -   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981867 1 +   4620579 a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565372 1 -   2598838 a
i Propithecus_coquerelli.NW_012148875.1                  I 37 C 0
s Propithecus_coronatus.k141_209299                           3010 1 -      7103 a
i Propithecus_coronatus.k141_209299                      I 39 C 0
s Propithecus_diadema.k141_153680                             3607 1 -     11706 a
i Propithecus_diadema.k141_153680                        I 39 C 0
s Propithecus_edwardsi.k141_635656                            7345 1 -     30655 a
i Propithecus_edwardsi.k141_635656                       I 41 C 0
s Propithecus_perrieri.k141_1496898                          33658 1 +     46564 a
i Propithecus_perrieri.k141_1496898                      I 29 C 0
s Propithecus_tattersalli.k141_1127767                       93937 1 -     98465 a
i Propithecus_tattersalli.k141_1127767                   I 37 C 0
s Propithecus_verreauxi.k141_1047036                          7576 1 +     35169 a
i Propithecus_verreauxi.k141_1047036                     I 39 C 0
s Pteropus_alecto.KB030862.1                               5840133 1 -  28871421 a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536644 1 -   4952924 a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098402 1 +  38429054 a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26199 1 +     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152691 1 -   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7066 1 +     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914030 1 +   3329780 a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74042 1 -    116970 a
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Semnopithecus_entellus.k141_158471                         24518 1 +     27374 A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28032 1 +     58920 A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14528 1 -     45317 A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22187 1 -     42441 A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24865 1 -     29113 A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27939 1 -     48123 A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857573 1 -   1910179 A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670609 1 +  18376816 a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124177 1 +    196729 A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390456 1 +   1523678 A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13397 1 +     22964 a
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190867 1 +    199430 A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104824 1 -    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6148 1 +      6850 A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6199 1 +     20590 a
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352412 1 - 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19087 1 -     31044 A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20064 1 +     26378 A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32742 1 -     78344 A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19389 1 +     25722 A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27694 1 -     62838 A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27740 1 +     46913 A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8549 1 -     28527 A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29631 1 -     64340 A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27668 1 -     63452 A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9113 1 +     22490 A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2539 1 -      6147 A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9444 1 -     13050 A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254684 1 -   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         708 1 +     19340 A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833383 1 -   4065304 a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7372 1 -     70247 A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Ursus_maritimus.KK499267.1                                181119 1 +   5085361 a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24511 1 -     30710 A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23418 1 -    147434 A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104259 1 -    112863 A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
e Erinaceus_europaeus.JH835339.1                           3665351 6 +   7059049 I
e Capromys_pilorides.CapPil_scaffold_652123                    778 0 -      1880 C
e Chinchilla_lanigera.JH722012.1                           1238110 0 -   2543920 C
e Nannospalax_galili.KL204047.1                             945473 0 +   3037898 C
e Saimiri_ustus.k141_360372                                  29505 0 -     47109 C
e Saimiri_sciureus.k141_1467173                              14353 0 -     22428 C
e Saimiri_oerstedii.k141_245838                              26950 0 -     34454 C
e Saimiri_macrodon.k141_1173117                              30259 0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       29873 0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1108306 0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            27343 0 +     75252 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005        1059 0 +      9367 C
e Octodon_degus.JH651603.1                                11054348 0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71065 0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  9593 0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   4663 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18949728 0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    98100 0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   3545 0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  17567 0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       62181 0 -     66877 C
e Cavia_porcellus.DS562891.1                               4999100 0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4995658 0 +  23392119 C
e Desmodus_rotundus.KZ672289.1                            11864423 4 -  20541912 I
e Callibella_humilis.k141_1233062                             9438 0 +     18648 C
e Lepus_americanus.LepAme_scaffold_56121                     17084 0 +     24238 C
e Carollia_perspicillata.CarPer_scaffold_668536                620 4 -      1021 I
e Zalophus_californianus.ZalCal_flattened_line_17732         28154 0 -     86975 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              5939 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3949 0 -     18639 C
e Odobenus_rosmarus.KB229312.1                             1450959 0 +   2017862 C
e Neomonachus_schauinslandi.NINY01007730.1                11468362 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14354378 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         7767 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             25450 0 -     74585 C
e Leptonychotes_weddellii.KB714746.1                        812760 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24915346 0 +  41312741 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  4678 2 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            214919 0 +    347723 C
e Ziphius_cavirostris.ZipCav_flattened_line_572595             381 0 +      1812 C
e Zapus_hudsonius.ZapHud_scaffold_533409                       444 0 -       753 C
e Xerus_inauris.XerIna_scaffold_2302                        173449 0 -    224448 C
e Vicugna_pacos.KN270157.1                                   75599 0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    2966 0 -     21056 C
e Tursiops_truncatus.MRVK01000835.1                       17360973 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6479716 0 -  10818551 C
e Tragulus_javanicus.TraJav_scaffold_3462                   172755 0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    479443 1 -    610378 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                1979 0 +      5583 C
e Sus_scrofa.CM000828.4                                    6643073 0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1867659 0 +   3870691 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    48514 15 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    115243 0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           7153 0 +     21866 C
e Sapajus_apella.ctg103                                     237563 0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        7141 0 +     16473 C
e Saguinus_oedipus.k141_1466288                               3903 0 -      4301 C
e Saguinus_mystax.k141_8077960                                3140 0 +      5979 C
e Saguinus_midas.LG03                                       390969 0 - 209938924 C
e Saguinus_labiatus.k141_2380921                              1533 0 -      4390 C
e Saguinus_inustus.k141_2469308                               3191 0 +      5932 C
e Saguinus_imperator.k141_1898058                             3269 0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             3179 0 +      6077 C
e Saguinus_bicolor.k141_1429097                               3284 0 +     27962 C
e Rhinopithecus_strykeri.ctg102                             235621 0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104121379 0 + 195417433 C
e Rhinopithecus_bieti.k119_778604                              771 0 +      7119 C
e Rattus_norvegicus.chr16                                 37022029 15 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 52474 0 +     55069 C
e Pteronotus_parnellii.KE847780.1                            51418 4 -     66298 I
e Psammomys_obesus.NESX01036366.1                            36738 15 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_255930                 2709 0 +      3019 C
e Presbytis_mitrata.k141_584736                              44019 0 -     80239 C
e Presbytis_comata.k141_1230337                              26825 6 +     69807 I
e Plecturocebus_moloch.k141_1031110                          43296 0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          41829 0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      13913 0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          6976 0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          41930 0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          6979 0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     42281 0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       41887 0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          2483 0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        7399 0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           4162 0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           31001 0 +     51125 C
e Pithecia_pithecia.tarseq_165                              555987 0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           31017 0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         31257 0 +     63561 C
e Pithecia_hirsuta.k141_640380                               30981 0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          5238 0 -     25401 C
e Pithecia_albicans.k141_1239476                             64145 0 +    207309 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              12072 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         246131 15 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614987 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       4068 0 +     17875 C
e Ovis_aries.CM001607.2                                   26403549 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107102921 0 - 174332312 C
e Orcinus_orca.KB316932.1                                  8096230 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    2933 15 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    92041 27 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          13555 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         435555 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2550449 0 -   3988456 C
e Noctilio_leporinus.NocLep_scaffold_7894                   127490 0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226946 0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118989 0 +    130748 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             82569 0 -     86153 C
e Mus_spretus.CM004101.1                                  39496113 12 + 130317789 I
e Mus_pahari.LT608297.1                                   58216682 14 +  89631738 I
e Mus_musculus.chr8                                       41686817 12 + 129401213 I
e Mus_caroli.LT608237.1                                   35592432 12 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  24790 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 178533 4 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   352776 0 +    437263 C
e Mirza_zaza.k141_766280                                     51639 0 -     62432 C
e Microtus_ochrogaster.CM001695.1                         15961703 8 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                184368 4 +    200668 I
e Microcebus_murinus.CM007674.1                           74983850 0 +  93316391 C
e Mico_schneideri.k141_1877700                                     18363 0 -     26561 C
e Mico_humeralifer.k141_1180625                              10049 0 -     12984 C
e Mico_argentatus.k141_582562                                 9547 0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     80677 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17428487 52 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 49397 15 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7500299 0 +  40650429 C
e Loxodonta_africana.GL010049.1                           39080257 0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             334378 0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       8246 0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          8247 0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              8236 0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          8240 0 +     29618 C
e Leontopithecus_rosalia.k141_349454                         10762 0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     9381 0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        3005 0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           3175 0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        3421 0 -     13097 C
e Lagothrix_lagothricha.k141_246028                          42508 0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 65092 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1238848 0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                2844 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     386079 0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       3716 0 -    135385 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  68938 0 +     83186 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6872 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_128297                6330 0 +      6687 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  8429 0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_10447                    1231 0 -     78134 C
e Glis_glis.GliGli_scaffold_33859                            33740 0 -     36801 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90671 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             4592 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           64379 0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                           12245 15 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          30258 21 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238977 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18625033 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    644247 0 -   1526836 C
e Cricetulus_griseus.LT883664.1                          213113980 146 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 43541 15 -     83289 I
e Condylura_cristata.JH655891.1                           35806430 0 +  53390261 C
e Chiropotes_sagulatus.k141_1113111                           7340 0 +     34062 C
e Chiropotes_israelita.k141_313004                           41769 0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           3286 0 +      5346 C
e Cheracebus_torquatus.k141_890198                           18692 0 +     39636 C
e Cheracebus_regulus.k141_471822                             18899 0 +    216457 C
e Cheracebus_lugens.k141_1179667                             18644 0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             8231 0 -     32913 C
e Cheirogaleus_medius.k141_759766                             4380 0 -     15404 C
e Cheirogaleus_major.k141_666340                             29863 0 -     33796 C
e Cebus_unicolor.k141_1654760                                66329 0 -     89041 C
e Cebus_olivaceus.k141_1404781                                7234 0 -     34880 C
e Cebus_albifrons.Contig27                                  370345 0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               42414 0 +     53515 C
e Cebuella_niveiventris.k141_592277                           4356 0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     78806 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    26939 0 -     39886 C
e Capra_hircus.CM004588.1                                 26590595 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27408322 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1208211 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664551 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7630265 0 +  17673402 C
e Callithrix_kuhlii.k119_102356                                958 0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165453436 0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            1043 0 -      8861 C
e Callimico_goeldii.k141_1609886                              8977 0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         19871 0 +    119600 C
e Cacajao_hosomi.k141_81245                                  19958 0 +     95584 C
e Cacajao_calvus.k141_89051                                  42432 0 -     91139 C
e Cacajao_ayresi.k141_96119                                   7138 0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1529251 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27544226 0 -  45695690 C
e Bos_mutus.JH880303.1                                      754087 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20355519 0 +  48749331 C
e Bison_bison.KN261452.1                                     21133 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     85601 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         3710 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7956501 0 -  23207421 C
e Ateles_paniscus.k141_866194                                22250 0 -     33135 C
e Ateles_marginatus.k141_970259                              48191 0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              32821 0 +     44353 C
e Ateles_chamek.k141_615173                                   5268 0 -     28759 C
e Ateles_belzebuth.k141_1572163                              10131 0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               273964 0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      15302 0 -     32367 C
e Aotus_vociferans.k141_1514463                                916 0 -     17186 C
e Aotus_trivirgatus.k141_318729                               1356 0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             1081 0 -     15923 C
e Aotus_azarae.k141_887050                                     456 0 +     17741 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49707 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      176402 4 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1584592 0 +   2318259 C
e Alouatta_seniculus.k141_928287                             32213 0 +     42133 C
e Alouatta_puruensis.k141_251022                              8077 0 +     30854 C
e Alouatta_palliata.k141_638677                              45901 0 +     70886 C
e Alouatta_nigerrima.k141_376068                             40255 0 +     45454 C
e Alouatta_macconnelli.k141_361275                           23264 0 -     24835 C
e Alouatta_juara.k141_1687208                                41630 0 -     64179 C
e Alouatta_discolor.k141_2561099                             43180 0 +     55831 C
e Alouatta_caraya.k141_1109140                               43741 0 -     78289 C
e Alouatta_belzebul.k141_1011583                             71502 0 -     84148 C
e Allactaga_bullata.AllBul_scaffold_20030                    17337 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     24389 32 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4746 2 +     36723 CA
s Acinonyx_jubatus.LLWD01001279.1                           812142 1 +   1699592 c-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414607 1 +  29979442 c-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47062 2 +     53615 CA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43023 2 +     44087 CA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15648 2 -     21945 CA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17331 2 +     32033 CA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18833 2 -     45910 CA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Avahi_laniger.k141_2756659                                  5477 2 +     11645 ca
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5487 2 -     19611 ca
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s CanFam4.chr16                                           42504629 1 +  60362399 C-
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8265 1 -     23171 C-
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221608 1 +   9314153 c-
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614743 1 +  59632846 c-
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106324 1 -  63665305 c-
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269525 2 +    496798 ca
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1454 2 -      5494 ca
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491421 2 -  27778364 ca
i Ceratotherium_simum.JH767749.1                         C 0 I 19
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18254 2 +     27315 CA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 19
s Cercocebus_atys.KQ010504.1                                140245 2 -   4669795 ca
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43987 2 +     47900 CA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43812 2 -     44860 CA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43800 2 -    148725 CA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25977 2 -     40656 CA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5943 2 +     20796 CA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11060 2 -     17524 CA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26782 2 -     34525 CA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10563 2 -     25376 CA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363159 2 -  39242232 CA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268875 2 +  21565898 CA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31249 2 -     45857 CA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26148 2 -     32606 CA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2307 2 +      8499 CA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24705 2 +     70610 CA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21674 2 +     36323 CC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chlorocebus_aethiops.ctg25                                342565 2 +  18827391 CA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9112 2 -     44032 CA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303889 2 - 135778131 ca
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14026 2 +     15858 CA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605602 2 -    839153 CA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408318 2 -   2368649 ca
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378193 2 - 200372422 CA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1742 2 -     84244 CA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2025 2 -      8242 CA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 7
s Crocidura_indochinensis.CroInd_scaffold_77846               6702 2 +     12657 TA
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3593 1 +     87169 c-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 58 C 0
s Dasypus_novemcinctus.JH564415.1                          2109400 1 -   2246927 C-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291798 2 +  12879189 CA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663710 2 -   1390856 ca
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 19
s Diceros_bicornis.DicBicMic_scaffold_5955                  138498 2 -    198055 CA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 19
s Echinops_telfairi.JH980293.1                            62854171 2 - 111700974 CA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5486 2 +     19438 ca
i Eidolon_helvum.AWHC01266696.1                          C 0 I 7
s Elephantulus_edwardii.JH947257.1                         9107784 2 -  10337057 CA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578096 2 +  14770903 ca
i Eptesicus_fuscus.JH977646.1                            C 0 I 17
s Equus_asinus.JREZ01000139.1                              3040578 2 -   4378816 ca
i Equus_asinus.JREZ01000139.1                            C 0 I 15
s Equus_caballus.CM000403.2                               21374502 2 +  39960074 CA
i Equus_caballus.CM000403.2                              C 0 I 15
s Equus_przewalskii.KK951119.1                              411288 2 -    498745 ca
i Equus_przewalskii.KK951119.1                           C 0 I 15
s Erythrocebus_patas.Contig38                               262092 2 +  21539334 CA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13995 2 -     24895 CA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41704 2 -     70999 CA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85666 2 +    112731 CA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42235 2 +     68309 CA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52561 2 -     65740 CA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23190 2 -     75513 CA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47387 2 -     97555 CA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4112 2 +     30972 CA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41832 2 -     52037 CA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58234 2 -    111500 CA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246051 1 - 206538554 c-
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115837 1 - 205367284 c-
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26938 1 -     30238 C-
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124249 2 -    137831 CA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7794 2 +     22493 CA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19861 2 -     32986 CA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 394 2 -     28519 CA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Gorilla_beringei.k141_3358147                               5048 2 -      8343 CA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254060 2 - 186649187 ca
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13920 2 -     40692 CA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35322 2 +     49394 CA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60190 2 -     66874 CA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9064 2 -     42923 CA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16064 2 -     53142 CA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30022 1 -    327341 C-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553377 2 -   1711038 ca
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 7
s Hipposideros_galeritus.HipGal_scaffold_164997                290 2 -      2730 ca
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 7
s Hoolock_leuconedys.ctg274                                    142068 2 -    630532 CA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               5103 2 +     12352 CA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12287 2 +     55766 CA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051885 2 + 191637585 CA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800763 2 +  11177569 CA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_2415743                                    1624 2 +     11955 ca
i Indri_indri.k141_2415743                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    31408 2 -     49555 ca
i Lasiurus_borealis.LasBor_scaffold_26245                C 0 I 11
s Lemur_catta.scaffold_24                                 14758713 2 +  30322482 CA
i Lemur_catta.scaffold_24                                C 0 C 0
s Lophocebus_aterrimus.ctg367                               333130 2 -   1826925 CA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9814 2 +     19643 CA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043477 2 -   6120653 ca
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                41613898 1 +  59628241 c-
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44514 2 -     61512 CA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372176 2 -  60120075 CA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24439 2 +     30207 CA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21542 2 -     24934 CA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24392 2 +     30527 CA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35568 2 -     50087 CA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45312 2 +     51645 CA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414514 2 - 187317192 ca
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398745 2 +  25927173 ca
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47917 2 -     62418 CA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  455 2 +     14901 CA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44389 2 +     59329 CA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270297 2 +    668171 CA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  573 2 +      1732 CA
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2095 2 +     17132 CA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222449 2 -    270270 CA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 10
s Mandrillus_leucophaeus.scaffold280                        321594 2 +  24302211 CA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356426 2 -    752769 CA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672782 2 -    737560 TG
i Manis_javanica.JSZB01003497.1                          C 0 I 24
s Manis_pentadactyla.KN006162.1                             220066 2 +    317179 TG
i Manis_pentadactyla.KN006162.1                          C 0 I 27
s Megaderma_lyra.MegLyr_scaffold_4542                       149640 2 +    207569 ca
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 7
s Microgale_talazaci.MicTal_scaffold_6613                    45217 2 +    145209 GG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362481 2 -   8254450 ca
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 11
s Miniopterus_schreibersii.MinSch_scaffold_23309             41388 2 -     48117 CA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 11
s Miopithecus_ogouensis.k141_1534655                         21602 2 -     27822 CA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17774 1 -     63510 C-
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38452 2 +     47283 CG
i Murina_feae.MurFea_scaffold_17764                      C 0 I 11
s Myotis_brandtii.KE162005.1                               9792734 2 +  10118263 ca
i Myotis_brandtii.KE162005.1                             I 30 I 11
s Myotis_davidii.KB100139.1                                4386864 2 +   6019432 ca
i Myotis_davidii.KB100139.1                              C 0 I 11
s Myotis_lucifugus.GL429869.1                               382691 2 +   4330536 ca
i Myotis_lucifugus.GL429869.1                            I 8 I 11
s Myotis_myotis.MyoMyo_scaffold_66571                         1511 2 +     18357 ca
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118989 2 +    130748 CA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              28243 2 +     34575 CA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           52996 2 -    132029 CA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9091 2 -     16345 CA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14976 2 +     22201 CA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413197 2 -  22158432 CA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25374 2 -     54323 CA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197491 1 +   9404916 c-
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635841 2 + 196305487 CA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2599 2 -      3937 CA
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564106 2 - 199412804 CA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12897 2 -     14239 CA
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38538 1 +    559221 c-
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39410 2 -     51505 CA
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352413 2 +   1103335 ca
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1472089 2 - 189151597 ca
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23763 1 -    230217 C-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461089 1 -  18783137 c-
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971746 1 +   8748460 c-
i Panthera_tigris.KE722367.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   242427 2 - 183742232 ca
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8889 2 +     21308 CA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291463 2 -  20919399 CA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21537 2 -     27687 CA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14683 2 +     16796 CA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21494 2 -     23640 CA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14358 1 +     78924 C-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25620 2 +     31479 CA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17989 2 -     24908 CA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2704958                            1701 2 +     55023 CA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1251 2 -     89929 CA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1840 2 +     40849 CA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253504 2 +  14605196 ca
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3036 2 +     22231 ca
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 11
s Pongo_abelii.CM009266.2                                   177213 2 - 189387572 ca
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192030 2 -   9816681 CA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981868 2 +   4620579 ca
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565373 2 -   2598838 ca
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3011 2 -      7103 ca
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3608 2 -     11706 ca
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7346 2 -     30655 ca
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33659 2 +     46564 ca
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93938 2 -     98465 ca
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7577 2 +     35169 ca
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840134 2 -  28871421 ca
i Pteropus_alecto.KB030862.1                             C 0 I 7
s Pteropus_vampyrus.KN525825.1                             3536645 2 -   4952924 ca
i Pteropus_vampyrus.KN525825.1                           C 0 I 7
s Puma_concolor.QAVW01001104.1                            18098403 1 +  38429054 c-
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26200 2 +     91421 CA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152692 2 -   7812017 CA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7067 2 +     72585 CA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914031 2 +   3329780 ca
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 7
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74043 2 -    116970 ca
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 7
s Semnopithecus_entellus.k141_158471                         24519 2 +     27374 CA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28033 2 +     58920 CA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14529 2 -     45317 CA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22188 2 -     42441 CA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24866 2 -     29113 CA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27940 2 -     48123 CA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857574 2 -   1910179 CA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670610 2 +  18376816 ca
i Sorex_araneus.JH798187.1                               C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124178 1 +    196729 C-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390457 2 +   1523678 CA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13398 2 +     22964 ca
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 11
s Tamandua_tetradactyla.TamTet_scaffold_224794                1979 2 +      5583 CA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190868 2 +    199430 CA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 41
s Tapirus_terrestris.TapTer_scaffold_755                    104825 2 -    539355 CA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 55
s Tarsius_lariang.k141_1780720                                6149 2 +      6850 CA
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6200 2 +     20590 ca
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352413 2 - 186847797 ca
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20065 2 +     26378 CA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32743 2 -     78344 CA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19390 2 +     25722 CA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27695 2 -     62838 CA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27741 2 +     46913 CA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29632 2 -     64340 CA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27669 2 -     63452 CA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9114 2 +     22490 CA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2540 2 -      6147 CA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9445 2 -     13050 CA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254685 2 -   6242583 CA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         709 2 +     19340 CA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833384 2 -   4065304 ca
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7373 2 -     70247 CA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Ursus_maritimus.KK499267.1                                181120 1 +   5085361 c-
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24512 2 -     30710 CG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23419 2 -    147434 CG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104260 1 -    112863 C-
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
e Erinaceus_europaeus.JH835339.1                           3665351 6 +   7059049 I
e Capromys_pilorides.CapPil_scaffold_652123                    778 0 -      1880 C
e Chinchilla_lanigera.JH722012.1                           1238110 0 -   2543920 C
e Nannospalax_galili.KL204047.1                             945473 0 +   3037898 C
e Saimiri_ustus.k141_360372                                  29505 0 -     47109 C
e Saimiri_sciureus.k141_1467173                              14353 0 -     22428 C
e Saimiri_oerstedii.k141_245838                              26950 0 -     34454 C
e Saimiri_macrodon.k141_1173117                              30259 0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       29873 0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1108306 0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            27343 0 +     75252 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005        1059 0 +      9367 C
e Octodon_degus.JH651603.1                                11054348 0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71065 0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  9593 0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   4663 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18949728 0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    98100 0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   3545 0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  17567 0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       62181 0 -     66877 C
e Cavia_porcellus.DS562891.1                               4999100 0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4995658 0 +  23392119 C
e Desmodus_rotundus.KZ672289.1                            11864423 4 -  20541912 I
e Callibella_humilis.k141_1233062                             9438 0 +     18648 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   19088 0 -     31044 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            12055 0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     17084 0 +     24238 C
e Carollia_perspicillata.CarPer_scaffold_668536                620 4 -      1021 I
e Zalophus_californianus.ZalCal_flattened_line_17732         28154 0 -     86975 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              5939 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3949 0 -     18639 C
e Odobenus_rosmarus.KB229312.1                             1450959 0 +   2017862 C
e Neomonachus_schauinslandi.NINY01007730.1                11468362 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14354378 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         7767 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             25450 0 -     74585 C
e Leptonychotes_weddellii.KB714746.1                        812760 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24915346 0 +  41312741 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  4678 2 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            214919 0 +    347723 C
e Ziphius_cavirostris.ZipCav_flattened_line_572595             381 0 +      1812 C
e Zapus_hudsonius.ZapHud_scaffold_533409                       444 0 -       753 C
e Xerus_inauris.XerIna_scaffold_2302                        173449 0 -    224448 C
e Vicugna_pacos.KN270157.1                                   75599 0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    2966 0 -     21056 C
e Tursiops_truncatus.MRVK01000835.1                       17360973 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6479716 0 -  10818551 C
e Tragulus_javanicus.TraJav_scaffold_3462                   172755 0 -    200418 C
e Trachypithecus_germaini.k141_57262                          8550 0 -     28527 C
e Tonatia_saurophila.TonSau_scaffold_294                    479443 1 -    610378 I
e Sus_scrofa.CM000828.4                                    6643073 0 +  69701581 C
e Spermophilus_dauricus.KZ294078.1                         1867659 0 +   3870691 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    48514 15 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    115243 0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           7153 0 +     21866 C
e Sapajus_apella.ctg103                                     237563 0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        7141 0 +     16473 C
e Saguinus_oedipus.k141_1466288                               3903 0 -      4301 C
e Saguinus_mystax.k141_8077960                                3140 0 +      5979 C
e Saguinus_midas.LG03                                       390969 0 - 209938924 C
e Saguinus_labiatus.k141_2380921                              1533 0 -      4390 C
e Saguinus_inustus.k141_2469308                               3191 0 +      5932 C
e Saguinus_imperator.k141_1898058                             3269 0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             3179 0 +      6077 C
e Saguinus_bicolor.k141_1429097                               3284 0 +     27962 C
e Rhinopithecus_strykeri.ctg102                             235621 0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104121379 0 + 195417433 C
e Rhinopithecus_bieti.k119_778604                              771 0 +      7119 C
e Rattus_norvegicus.chr16                                 37022029 15 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 52474 0 +     55069 C
e Pteronotus_parnellii.KE847780.1                            51418 4 -     66298 I
e Psammomys_obesus.NESX01036366.1                            36738 15 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_255930                 2709 0 +      3019 C
e Presbytis_mitrata.k141_584736                              44019 0 -     80239 C
e Presbytis_comata.k141_1230337                              26825 6 +     69807 I
e Plecturocebus_moloch.k141_1031110                          43296 0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          41829 0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      13913 0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          6976 0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          41930 0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          6979 0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     42281 0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       41887 0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          2483 0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        7399 0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           4162 0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           31001 0 +     51125 C
e Pithecia_pithecia.tarseq_165                              555987 0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           31017 0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         31257 0 +     63561 C
e Pithecia_hirsuta.k141_640380                               30981 0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          5238 0 -     25401 C
e Pithecia_albicans.k141_1239476                             64145 0 +    207309 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              12072 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         246131 15 +  18517816 I
e Pantholops_hodgsonii.KE114653.1                          1614987 0 +   2937107 C
e Ovis_canadensis.OviCan_scaffold_67953                       4068 0 +     17875 C
e Ovis_aries.CM001607.2                                   26403549 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107102921 0 - 174332312 C
e Orcinus_orca.KB316932.1                                  8096230 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    2933 15 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    92041 27 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          13555 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         435555 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2550449 0 -   3988456 C
e Noctilio_leporinus.NocLep_scaffold_7894                   127490 0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226946 0 -   7148211 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             82569 0 -     86153 C
e Mus_spretus.CM004101.1                                  39496113 12 + 130317789 I
e Mus_pahari.LT608297.1                                   58216682 14 +  89631738 I
e Mus_musculus.chr8                                       41686817 12 + 129401213 I
e Mus_caroli.LT608237.1                                   35592432 12 + 120012414 I
e Moschus_moschiferus.MosMos_scaffold_13123                  24790 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 178533 4 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   352776 0 +    437263 C
e Mirza_zaza.k141_766280                                     51639 0 -     62432 C
e Microtus_ochrogaster.CM001695.1                         15961703 8 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                184368 4 +    200668 I
e Microcebus_murinus.CM007674.1                           74983850 0 +  93316391 C
e Mico_schneideri.k141_1877700                                     18363 0 -     26561 C
e Mico_humeralifer.k141_1180625                              10049 0 -     12984 C
e Mico_argentatus.k141_582562                                 9547 0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     80677 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17428487 52 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 49397 15 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7500299 0 +  40650429 C
e Loxodonta_africana.GL010049.1                           39080257 0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             334378 0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       8246 0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          8247 0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              8236 0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          8240 0 +     29618 C
e Leontopithecus_rosalia.k141_349454                         10762 0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     9381 0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        3005 0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           3175 0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        3421 0 -     13097 C
e Lagothrix_lagothricha.k141_246028                          42508 0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 65092 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1238848 0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                2844 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     386079 0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       3716 0 -    135385 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  68938 0 +     83186 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6872 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_128297                6330 0 +      6687 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  8429 0 +     48891 C
e Graphiurus_murinus.GraMur_scaffold_10447                    1231 0 -     78134 C
e Glis_glis.GliGli_scaffold_33859                            33740 0 -     36801 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90671 0 -     95226 C
e Eubalaena_japonica.EubJap_flattened_line_118172             4592 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           64379 0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                           12245 15 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          30258 21 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238977 0 -    607251 C
e Delphinapterus_leucas.KZ290073.1                        18625033 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    644247 0 -   1526836 C
e Cricetulus_griseus.LT883664.1                          213113980 146 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 43541 15 -     83289 I
e Condylura_cristata.JH655891.1                           35806430 0 +  53390261 C
e Chiropotes_sagulatus.k141_1113111                           7340 0 +     34062 C
e Chiropotes_israelita.k141_313004                           41769 0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           3286 0 +      5346 C
e Cheracebus_torquatus.k141_890198                           18692 0 +     39636 C
e Cheracebus_regulus.k141_471822                             18899 0 +    216457 C
e Cheracebus_lugens.k141_1179667                             18644 0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             8231 0 -     32913 C
e Cheirogaleus_medius.k141_759766                             4380 0 -     15404 C
e Cheirogaleus_major.k141_666340                             29863 0 -     33796 C
e Cebus_unicolor.k141_1654760                                66329 0 -     89041 C
e Cebus_olivaceus.k141_1404781                                7234 0 -     34880 C
e Cebus_albifrons.Contig27                                  370345 0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               42414 0 +     53515 C
e Cebuella_niveiventris.k141_592277                           4356 0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     78806 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    26939 0 -     39886 C
e Capra_hircus.CM004588.1                                 26590595 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27408322 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1208211 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664551 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7630265 0 +  17673402 C
e Callithrix_kuhlii.k119_102356                                958 0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165453436 0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            1043 0 -      8861 C
e Callimico_goeldii.k141_1609886                              8977 0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         19871 0 +    119600 C
e Cacajao_hosomi.k141_81245                                  19958 0 +     95584 C
e Cacajao_calvus.k141_89051                                  42432 0 -     91139 C
e Cacajao_ayresi.k141_96119                                   7138 0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1529251 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27544226 0 -  45695690 C
e Bos_mutus.JH880303.1                                      754087 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20355519 0 +  48749331 C
e Bison_bison.KN261452.1                                     21133 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     85601 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         3710 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7956501 0 -  23207421 C
e Ateles_paniscus.k141_866194                                22250 0 -     33135 C
e Ateles_marginatus.k141_970259                              48191 0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              32821 0 +     44353 C
e Ateles_chamek.k141_615173                                   5268 0 -     28759 C
e Ateles_belzebuth.k141_1572163                              10131 0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               273964 0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      15302 0 -     32367 C
e Aotus_vociferans.k141_1514463                                916 0 -     17186 C
e Aotus_trivirgatus.k141_318729                               1356 0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             1081 0 -     15923 C
e Aotus_azarae.k141_887050                                     456 0 +     17741 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49707 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      176402 4 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1584592 0 +   2318259 C
e Alouatta_seniculus.k141_928287                             32213 0 +     42133 C
e Alouatta_puruensis.k141_251022                              8077 0 +     30854 C
e Alouatta_palliata.k141_638677                              45901 0 +     70886 C
e Alouatta_nigerrima.k141_376068                             40255 0 +     45454 C
e Alouatta_macconnelli.k141_361275                           23264 0 -     24835 C
e Alouatta_juara.k141_1687208                                41630 0 -     64179 C
e Alouatta_discolor.k141_2561099                             43180 0 +     55831 C
e Alouatta_caraya.k141_1109140                               43741 0 -     78289 C
e Alouatta_belzebul.k141_1011583                             71502 0 -     84148 C
e Allactaga_bullata.AllBul_scaffold_20030                    17337 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     24389 32 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4748 1 +     36723 A
s Allenopithecus_nigroviridis.k141_3755588                   47064 1 +     53615 A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43025 1 +     44087 A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15650 1 -     21945 A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17333 1 +     32033 A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18835 1 -     45910 C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Avahi_laniger.k141_2756659                                  5479 1 +     11645 c
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5489 1 -     19611 c
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269527 1 +    496798 c
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1456 1 -      5494 c
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                140247 1 -   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43989 1 +     47900 A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43814 1 -     44860 A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43802 1 -    148725 A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25979 1 -     40656 A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5945 1 +     20796 A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11062 1 -     17524 A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26784 1 -     34525 A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10565 1 -     25376 A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363161 1 -  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268877 1 +  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31251 1 -     45857 A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26150 1 -     32606 A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2309 1 +      8499 A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24707 1 +     70610 A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21676 1 +     36323 A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chlorocebus_aethiops.ctg25                                342567 1 +  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9114 1 -     44032 A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303891 1 - 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14028 1 +     15858 G
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 1
s Choloepus_hoffmanni.KN194906.1                            605604 1 -    839153 G
i Choloepus_hoffmanni.KN194906.1                         C 0 I 1
s Colobus_angolensis.KN981557.1                             408320 1 -   2368649 c
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378195 1 - 200372422 C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1744 1 -     84244 C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2034 1 -      8242 A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 7 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6704 1 +     12657 A
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291800 1 +  12879189 T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Echinops_telfairi.JH980293.1                            62854173 1 - 111700974 A
i Echinops_telfairi.JH980293.1                           C 0 I 5
s Eidolon_helvum.AWHC01266696.1                               5495 1 +     19438 a
i Eidolon_helvum.AWHC01266696.1                          I 7 C 0
s Elephantulus_edwardii.JH947257.1                         9107786 1 -  10337057 A
i Elephantulus_edwardii.JH947257.1                       C 0 I 2
s Eptesicus_fuscus.JH977646.1                             12578115 1 +  14770903 a
i Eptesicus_fuscus.JH977646.1                            I 17 C 0
s Equus_asinus.JREZ01000139.1                              3040595 1 -   4378816 a
i Equus_asinus.JREZ01000139.1                            I 15 C 0
s Equus_caballus.CM000403.2                               21374519 1 +  39960074 a
i Equus_caballus.CM000403.2                              I 15 C 0
s Equus_przewalskii.KK951119.1                              411305 1 -    498745 a
i Equus_przewalskii.KK951119.1                           I 15 C 0
s Erythrocebus_patas.Contig38                               262094 1 +  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13997 1 -     24895 C
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41706 1 -     70999 C
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85668 1 +    112731 C
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42237 1 +     68309 C
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52563 1 -     65740 C
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23192 1 -     75513 C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47389 1 -     97555 C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4114 1 +     30972 C
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41834 1 -     52037 C
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58236 1 -    111500 C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg3793                                     124251 1 -    137831 C
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7796 1 +     22493 C
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19863 1 -     32986 C
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 396 1 -     28519 A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Gorilla_beringei.k141_3358147                               5050 1 -      8343 A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254062 1 - 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13922 1 -     40692 C
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35324 1 +     49394 C
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60192 1 -     66874 C
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9066 1 -     42923 C
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16066 1 -     53142 C
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553386 1 -   1711038 a
i Hipposideros_armiger.JXIK01000431.1                    I 7 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                299 1 -      2730 a
i Hipposideros_galeritus.HipGal_scaffold_164997          I 7 C 0
s Hoolock_leuconedys.ctg274                                    142070 1 -    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               5105 1 +     12352 A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12289 1 +     55766 A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051887 1 + 191637585 A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800765 1 +  11177569 A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_2415743                                    1626 1 +     11955 c
i Indri_indri.k141_2415743                               C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    31421 1 -     49555 a
i Lasiurus_borealis.LasBor_scaffold_26245                I 11 C 0
s Lemur_catta.scaffold_24                                 14758715 1 +  30322482 C
i Lemur_catta.scaffold_24                                C 0 C 0
s Lophocebus_aterrimus.ctg367                               333132 1 -   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9816 1 +     19643 C
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043479 1 -   6120653 c
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_1757516                              44516 1 -     61512 A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372178 1 -  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24441 1 +     30207 G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21544 1 -     24934 G
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24394 1 +     30527 A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35570 1 -     50087 A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45314 1 +     51645 A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414516 1 - 187317192 g
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398747 1 +  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47919 1 -     62418 A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  457 1 +     14901 A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44391 1 +     59329 A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270299 1 +    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  575 1 +      1732 A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2097 1 +     17132 A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321596 1 +  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356428 1 -    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_pentadactyla.KN006162.1                             220095 1 +    317179 a
i Manis_pentadactyla.KN006162.1                          I 27 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149649 1 +    207569 a
i Megaderma_lyra.MegLyr_scaffold_4542                    I 7 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45219 1 +    145209 A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 5
s Miniopterus_natalensis.LDJU01000034.1                    6362494 1 -   8254450 a
i Miniopterus_natalensis.LDJU01000034.1                  I 11 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41401 1 -     48117 A
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 11 C 0
s Miopithecus_ogouensis.k141_1534655                         21604 1 -     27822 A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38465 1 +     47283 A
i Murina_feae.MurFea_scaffold_17764                      I 11 C 0
s Myotis_brandtii.KE162005.1                               9792747 1 +  10118263 a
i Myotis_brandtii.KE162005.1                             I 11 C 0
s Myotis_davidii.KB100139.1                                4386877 1 +   6019432 a
i Myotis_davidii.KB100139.1                              I 11 C 0
s Myotis_lucifugus.GL429869.1                               382704 1 +   4330536 a
i Myotis_lucifugus.GL429869.1                            I 11 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118991 1 +    130748 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 1
s Nasalis_larvatus.k141_1350636                              28245 1 +     34575 C
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           52998 1 -    132029 A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9093 1 -     16345 A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14978 1 +     22201 A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413199 1 -  22158432 A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25376 1 -     54323 A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93635843 1 + 196305487 C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2601 1 -      3937 C
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564108 1 - 199412804 C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12899 1 -     14239 A
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 1
s Otolemur_crassicaudatus.k141_649260                        39412 1 -     51505 C
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352415 1 +   1103335 c
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1472091 1 - 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   242429 1 - 183742232 a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8891 1 +     21308 A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291465 1 -  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21539 1 -     27687 A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14685 1 +     16796 A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21496 1 -     23640 A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25622 1 +     31479 C
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17991 1 -     24908 C
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2704958                            1703 1 +     55023 C
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1253 1 -     89929 C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1842 1 +     40849 C
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253506 1 +  14605196 c
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3049 1 +     22231 a
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 11 C 0
s Pongo_abelii.CM009266.2                                   177215 1 - 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192032 1 -   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981870 1 +   4620579 c
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565375 1 -   2598838 c
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3013 1 -      7103 c
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3610 1 -     11706 c
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7348 1 -     30655 c
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33661 1 +     46564 c
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93940 1 -     98465 c
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7579 1 +     35169 c
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840143 1 -  28871421 a
i Pteropus_alecto.KB030862.1                             I 7 C 0
s Pteropus_vampyrus.KN525825.1                             3536654 1 -   4952924 a
i Pteropus_vampyrus.KN525825.1                           I 7 C 0
s Pygathrix_cinerea.k141_1153803                             26202 1 +     91421 C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152694 1 -   7812017 C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7069 1 +     72585 C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914040 1 +   3329780 a
i Rhinolophus_sinicus.LVEH01000134.1                     I 7 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74052 1 -    116970 a
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 7 C 0
s Semnopithecus_entellus.k141_158471                         24521 1 +     27374 C
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28035 1 +     58920 C
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14531 1 -     45317 C
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22190 1 -     42441 C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24868 1 -     29113 C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27942 1 -     48123 C
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857576 1 -   1910179 A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670612 1 +  18376816 a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390459 1 +   1523678 A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13411 1 +     22964 a
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 11 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1981 1 +      5583 G
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_7432                      190911 1 +    199430 A
i Tapirus_indicus.TapInd_scaffold_7432                   I 41 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104882 1 -    539355 A
i Tapirus_terrestris.TapTer_scaffold_755                 I 55 C 0
s Tarsius_lariang.k141_1780720                                6151 1 +      6850 C
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6202 1 +     20590 c
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352415 1 - 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20067 1 +     26378 C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32745 1 -     78344 C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19392 1 +     25722 C
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27697 1 -     62838 C
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27743 1 +     46913 C
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8550 1 -     28527 C
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29634 1 -     64340 C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27671 1 -     63452 C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9116 1 +     22490 C
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2542 1 -      6147 C
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9447 1 -     13050 C
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254687 1 -   6242583 C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         711 1 +     19340 C
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833386 1 -   4065304 a
i Tupaia_chinensis.KB320699.1                            C 0 I 34
s Tupaia_tana.TupTan_flattened_line_394                       7375 1 -     70247 A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 64
s Varecia_rubra.k141_787544                                  24514 1 -     30710 C
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23421 1 -    147434 C
i Varecia_variegata.k141_289850                          C 0 C 0
e Erinaceus_europaeus.JH835339.1                           3665351 6 +   7059049 I
e Capromys_pilorides.CapPil_scaffold_652123                    778 0 -      1880 C
e Chinchilla_lanigera.JH722012.1                           1238110 0 -   2543920 C
e Nannospalax_galili.KL204047.1                             945473 0 +   3037898 C
e Saimiri_ustus.k141_360372                                  29505 0 -     47109 C
e Saimiri_sciureus.k141_1467173                              14353 0 -     22428 C
e Saimiri_oerstedii.k141_245838                              26950 0 -     34454 C
e Saimiri_macrodon.k141_1173117                              30259 0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       29873 0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1108306 0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            27343 0 +     75252 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005        1059 0 +      9367 C
e Octodon_degus.JH651603.1                                11054348 0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71065 0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  9593 0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   4663 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18949728 0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    98100 0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   3545 0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  17567 0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       62181 0 -     66877 C
e Cavia_porcellus.DS562891.1                               4999100 0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4995658 0 +  23392119 C
e Desmodus_rotundus.KZ672289.1                            11864423 4 -  20541912 I
e Callibella_humilis.k141_1233062                             9438 0 +     18648 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   19088 0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2109401 0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            12055 0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     17084 0 +     24238 C
e Carollia_perspicillata.CarPer_scaffold_668536                620 4 -      1021 I
e Zalophus_californianus.ZalCal_flattened_line_17732         28154 0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                104261 0 -    112863 C
e Ursus_maritimus.KK499267.1                                181121 0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              5939 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3949 0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        38539 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1450959 0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                197492 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11468362 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14354378 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         7767 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             25450 0 -     74585 C
e Lycaon_pictus.CM007581.1                                41613899 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        812760 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24915346 0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45106325 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41614744 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          221609 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     8266 0 -     23171 C
e CanFam4.chr16                                           42504630 0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  4678 2 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            214919 0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20414608 0 +  29979442 C
e Ziphius_cavirostris.ZipCav_flattened_line_572595             381 0 +      1812 C
e Zapus_hudsonius.ZapHud_scaffold_533409                       444 0 -       753 C
e Xerus_inauris.XerIna_scaffold_2302                        173449 0 -    224448 C
e Vicugna_pacos.KN270157.1                                   75599 0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    2966 0 -     21056 C
e Tursiops_truncatus.MRVK01000835.1                       17360973 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6479716 0 -  10818551 C
e Tragulus_javanicus.TraJav_scaffold_3462                   172755 0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    479443 1 -    610378 I
e Sus_scrofa.CM000828.4                                    6643073 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             124179 0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1867659 0 +   3870691 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    48514 15 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    115243 0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           7153 0 +     21866 C
e Sapajus_apella.ctg103                                     237563 0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        7141 0 +     16473 C
e Saguinus_oedipus.k141_1466288                               3903 0 -      4301 C
e Saguinus_mystax.k141_8077960                                3140 0 +      5979 C
e Saguinus_midas.LG03                                       390969 0 - 209938924 C
e Saguinus_labiatus.k141_2380921                              1533 0 -      4390 C
e Saguinus_inustus.k141_2469308                               3191 0 +      5932 C
e Saguinus_imperator.k141_1898058                             3269 0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             3179 0 +      6077 C
e Saguinus_bicolor.k141_1429097                               3284 0 +     27962 C
e Rhinopithecus_strykeri.ctg102                             235621 0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104121379 0 + 195417433 C
e Rhinopithecus_bieti.k119_778604                              771 0 +      7119 C
e Rattus_norvegicus.chr16                                 37022029 15 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 52474 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18098404 0 +  38429054 C
e Pteronotus_parnellii.KE847780.1                            51418 4 -     66298 I
e Psammomys_obesus.NESX01036366.1                            36738 15 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_255930                 2709 0 +      3019 C
e Presbytis_mitrata.k141_584736                              44019 0 -     80239 C
e Presbytis_comata.k141_1230337                              26825 6 +     69807 I
e Plecturocebus_moloch.k141_1031110                          43296 0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          41829 0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      13913 0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          6976 0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          41930 0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          6979 0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     42281 0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       41887 0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          2483 0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        7399 0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_167872           4162 0 -      8168 C
e Pithecia_vanzolinii.k141_1369553                           31001 0 +     51125 C
e Pithecia_pithecia.tarseq_165                              555987 0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           31017 0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         31257 0 +     63561 C
e Pithecia_hirsuta.k141_640380                               30981 0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          5238 0 -     25401 C
e Pithecia_albicans.k141_1239476                             64145 0 +    207309 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              12072 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         246131 15 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14359 0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614987 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3971747 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18461090 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   23764 0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       4068 0 +     17875 C
e Ovis_aries.CM001607.2                                   26403549 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107102921 0 - 174332312 C
e Orcinus_orca.KB316932.1                                  8096230 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    2933 15 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    92041 27 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          13555 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         435555 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2550449 0 -   3988456 C
e Noctilio_leporinus.NocLep_scaffold_7894                   127490 0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226946 0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_66571                         1513 4 +     18357 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             82569 0 -     86153 C
e Mus_spretus.CM004101.1                                  39496113 12 + 130317789 I
e Mus_pahari.LT608297.1                                   58216682 14 +  89631738 I
e Mus_musculus.chr8                                       41686817 12 + 129401213 I
e Mus_caroli.LT608237.1                                   35592432 12 + 120012414 I
e Mungos_mungo.MunMun_flattened_line_18455                   17775 0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  24790 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 178533 4 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   352776 0 +    437263 C
e Mirza_zaza.k141_766280                                     51639 0 -     62432 C
e Microtus_ochrogaster.CM001695.1                         15961703 8 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                184368 4 +    200668 I
e Microcebus_murinus.CM007674.1                           74983850 0 +  93316391 C
e Mico_schneideri.k141_1877700                                     18363 0 -     26561 C
e Mico_humeralifer.k141_1180625                              10049 0 -     12984 C
e Mico_argentatus.k141_582562                                 9547 0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     80677 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17428487 52 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 49397 15 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7500299 0 +  40650429 C
e Manis_javanica.JSZB01003497.1                             672784 24 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                222451 10 -    270270 I
e Loxodonta_africana.GL010049.1                           39080257 0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             334378 0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       8246 0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          8247 0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              8236 0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          8240 0 +     29618 C
e Leontopithecus_rosalia.k141_349454                         10762 0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     9381 0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        3005 0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           3175 0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        3421 0 -     13097 C
e Lagothrix_lagothricha.k141_246028                          42508 0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 65092 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1238848 0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                2844 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     386079 0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       3716 0 -    135385 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  68938 0 +     83186 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6872 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_128297                6330 0 +      6687 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  8429 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                30023 0 -    327341 C
e Graphiurus_murinus.GraMur_scaffold_10447                    1231 0 -     78134 C
e Glis_glis.GliGli_scaffold_33859                            33740 0 -     36801 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90671 0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 26939 0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185115838 0 - 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_118172             4592 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           64379 0 -    133382 C
e Ellobius_talpinus.LOJH01026522.1                           12245 15 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          30258 21 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238977 0 -    607251 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  138500 19 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  663712 19 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18625033 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    644247 0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              3594 0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213113980 146 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 43541 15 -     83289 I
e Condylura_cristata.JH655891.1                           35806430 0 +  53390261 C
e Chiropotes_sagulatus.k141_1113111                           7340 0 +     34062 C
e Chiropotes_israelita.k141_313004                           41769 0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           3286 0 +      5346 C
e Cheracebus_torquatus.k141_890198                           18692 0 +     39636 C
e Cheracebus_regulus.k141_471822                             18899 0 +    216457 C
e Cheracebus_lugens.k141_1179667                             18644 0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             8231 0 -     32913 C
e Cheirogaleus_medius.k141_759766                             4380 0 -     15404 C
e Cheirogaleus_major.k141_666340                             29863 0 -     33796 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18256 19 +     27315 I
e Cebus_unicolor.k141_1654760                                66329 0 -     89041 C
e Cebus_olivaceus.k141_1404781                                7234 0 -     34880 C
e Cebus_albifrons.Contig27                                  370345 0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               42414 0 +     53515 C
e Cebuella_niveiventris.k141_592277                           4356 0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     78806 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    26939 0 -     39886 C
e Capra_hircus.CM004588.1                                 26590595 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27408322 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1208211 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664551 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7630265 0 +  17673402 C
e Callithrix_kuhlii.k119_102356                                958 0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165453436 0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            1043 0 -      8861 C
e Callimico_goeldii.k141_1609886                              8977 0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         19871 0 +    119600 C
e Cacajao_hosomi.k141_81245                                  19958 0 +     95584 C
e Cacajao_calvus.k141_89051                                  42432 0 -     91139 C
e Cacajao_ayresi.k141_96119                                   7138 0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1529251 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27544226 0 -  45695690 C
e Bos_mutus.JH880303.1                                      754087 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20355519 0 +  48749331 C
e Bison_bison.KN261452.1                                     21133 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     85601 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         3710 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7956501 0 -  23207421 C
e Ateles_paniscus.k141_866194                                22250 0 -     33135 C
e Ateles_marginatus.k141_970259                              48191 0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              32821 0 +     44353 C
e Ateles_chamek.k141_615173                                   5268 0 -     28759 C
e Ateles_belzebuth.k141_1572163                              10131 0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               273964 0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      15302 0 -     32367 C
e Aotus_vociferans.k141_1514463                                916 0 -     17186 C
e Aotus_trivirgatus.k141_318729                               1356 0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             1081 0 -     15923 C
e Aotus_azarae.k141_887050                                     456 0 +     17741 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49707 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      176402 4 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1584592 0 +   2318259 C
e Alouatta_seniculus.k141_928287                             32213 0 +     42133 C
e Alouatta_puruensis.k141_251022                              8077 0 +     30854 C
e Alouatta_palliata.k141_638677                              45901 0 +     70886 C
e Alouatta_nigerrima.k141_376068                             40255 0 +     45454 C
e Alouatta_macconnelli.k141_361275                           23264 0 -     24835 C
e Alouatta_juara.k141_1687208                                41630 0 -     64179 C
e Alouatta_discolor.k141_2561099                             43180 0 +     55831 C
e Alouatta_caraya.k141_1109140                               43741 0 -     78289 C
e Alouatta_belzebul.k141_1011583                             71502 0 -     84148 C
e Allactaga_bullata.AllBul_scaffold_20030                    17337 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     24389 32 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           812143 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4749 1 +     36723 A
s Allenopithecus_nigroviridis.k141_3755588                   47065 1 +     53615 A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43026 1 +     44087 A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15651 1 -     21945 A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17334 1 +     32033 A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584592 1 +   2318259 G
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176406 1 -    412891 G
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49707 1 -     68529 G
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18836 1 -     45910 A
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Avahi_laniger.k141_2756659                                  5480 1 +     11645 a
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5490 1 -     19611 a
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956501 1 -  23207421 g
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3710 1 -      4711 g
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85601 1 +    124022 G
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21133 1 +    288883 G
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355519 1 +  48749331 G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754087 1 +   1948126 G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544226 1 -  45695690 G
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529251 1 -   4408762 G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630265 1 +  17673402 G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664551 1 +   7040546 G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208211 1 +   1652518 G
i Camelus_ferus.KB017975.1                               C 0 C 0
s Capra_aegagrus.CM003241.1                               27408322 1 -  46296322 G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590595 1 +  44709034 G
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269528 1 +    496798 a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                624 1 -      1021 A
i Carollia_perspicillata.CarPer_scaffold_668536          I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78806 1 -    217609 G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1457 1 -      5494 a
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                140248 1 -   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43990 1 +     47900 A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43815 1 -     44860 A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43803 1 -    148725 A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25980 1 -     40656 A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5946 1 +     20796 A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11063 1 -     17524 A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26785 1 -     34525 A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10566 1 -     25376 A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363162 1 -  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268878 1 +  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31252 1 -     45857 A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26151 1 -     32606 A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2310 1 +      8499 A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24708 1 +     70610 A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21677 1 +     36323 A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chlorocebus_aethiops.ctg25                                342568 1 +  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9115 1 -     44032 G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303892 1 - 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14030 1 +     15858 A
i Choloepus_didactylus.ChoDid_scaffold_70559             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            605606 1 -    839153 A
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                             408321 1 -   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378196 1 - 200372422 A
i Colobus_guereza.LG01                                   C 0 I 1
s Colobus_polykomos.k141_906115                               1745 1 -     84244 A
i Colobus_polykomos.k141_906115                          C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2035 1 -      8242 C
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_77846               6705 1 +     12657 A
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291801 1 +  12879189 G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625033 1 -  35494412 G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864427 1 -  20541912 A
i Desmodus_rotundus.KZ672289.1                           I 4 C 0
s Eidolon_helvum.AWHC01266696.1                               5496 1 +     19438 c
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107789 1 -  10337057 A
i Elephantulus_edwardii.JH947257.1                       I 2 I 1
s Eptesicus_fuscus.JH977646.1                             12578116 1 +  14770903 c
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040596 1 -   4378816 a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374520 1 +  39960074 a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411306 1 -    498745 a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               262095 1 +  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64379 1 -    133382 G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4592 1 +      7672 G
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               13998 1 -     24895 A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41707 1 -     70999 A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85669 1 +    112731 A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42238 1 +     68309 A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52564 1 -     65740 A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23193 1 -     75513 A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47390 1 -     97555 A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4115 1 +     30972 A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41835 1 -     52037 A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58237 1 -    111500 A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg3793                                     124252 1 -    137831 A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7797 1 +     22493 A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19864 1 -     32986 A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 397 1 -     28519 A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90671 1 -     95226 g
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Gorilla_beringei.k141_3358147                               5051 1 -      8343 A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254063 1 - 186649187 a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13923 1 -     40692 A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35325 1 +     49394 A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60193 1 -     66874 A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9067 1 -     42923 A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16067 1 -     53142 A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8429 1 +     48891 G
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6872 1 -     36432 G
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553387 1 -   1711038 c
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                300 1 -      2730 c
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142071 1 -    630532 A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               5106 1 +     12352 A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12290 1 +     55766 A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051888 1 + 191637585 A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800766 1 +  11177569 A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_2415743                                    1627 1 +     11955 a
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2844 1 -     16823 C
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65092 1 -     97402 G
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    31422 1 -     49555 c
i Lasiurus_borealis.LasBor_scaffold_26245                C 0 C 0
s Lemur_catta.scaffold_24                                 14758716 1 +  30322482 A
i Lemur_catta.scaffold_24                                C 0 C 0
s Lipotes_vexillifer.KE559953.1                             334378 1 +    662738 G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333133 1 -   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9817 1 +     19643 A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043480 1 -   6120653 a
i Loris_tardigradus.ctg83                                C 0 C 0
s Macaca_arctoides.k141_1757516                              44517 1 -     61512 A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372179 1 -  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24442 1 +     30207 A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21545 1 -     24934 A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24395 1 +     30527 A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35571 1 -     50087 A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45315 1 +     51645 A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414517 1 - 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398748 1 +  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47920 1 -     62418 A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  458 1 +     14901 A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44392 1 +     59329 A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270300 1 +    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  576 1 +      1732 A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2098 1 +     17132 A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321597 1 +  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356429 1 -    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672808 1 -    737560 c
i Manis_javanica.JSZB01003497.1                          I 24 C 0
s Manis_pentadactyla.KN006162.1                             220096 1 +    317179 c
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149650 1 +    207569 c
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80677 1 +     93471 G
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184372 1 +    200668 A
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 4 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362495 1 -   8254450 c
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41402 1 -     48117 C
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21605 1 -     27822 A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352776 1 +    437263 G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178537 1 +    366855 A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24790 1 -     82753 G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38466 1 +     47283 C
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Myotis_brandtii.KE162005.1                               9792748 1 +  10118263 c
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386878 1 +   6019432 c
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382705 1 +   4330536 c
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1517 1 +     18357 c
i Myotis_myotis.MyoMyo_scaffold_66571                    I 4 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118993 1 +    130748 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 1 C 0
s Nasalis_larvatus.k141_1350636                              28246 1 +     34575 A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226946 1 -   7148211 G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nomascus_annamensis.k141_1771965                           52999 1 -    132029 A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9094 1 -     16345 A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14979 1 +     22201 A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413200 1 -  22158432 A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25377 1 -     54323 A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93635844 1 + 196305487 A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2602 1 -      3937 A
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564109 1 - 199412804 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435555 1 -    630418 g
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13555 1 +    150152 g
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8096230 1 +  10937097 G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12901 1 -     14239 A
i Orycteropus_afer.OryAfe_flattened_line_171931          I 1 I 1
s Otolemur_crassicaudatus.k141_649260                        39413 1 -     51505 A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352416 1 +   1103335 a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403549 1 -  44047080 G
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4068 1 +     17875 G
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472092 1 - 189151597 a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614987 1 +   2937107 G
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242430 1 - 183742232 a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8892 1 +     21308 A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291466 1 -  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21540 1 -     27687 A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14686 1 +     16796 A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21497 1 -     23640 A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25623 1 +     31479 A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17992 1 -     24908 A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12072 1 -     15039 G
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1704 1 +     55023 A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1254 1 -     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1843 1 +     40849 A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253507 1 +  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3050 1 +     22231 c
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4162 1 -      8168 G
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Pongo_abelii.CM009266.2                                   177216 1 - 189387572 a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192033 1 -   9816681 A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981871 1 +   4620579 a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565376 1 -   2598838 a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3014 1 -      7103 a
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3611 1 -     11706 a
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7349 1 -     30655 a
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33662 1 +     46564 a
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93941 1 -     98465 a
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7580 1 +     35169 a
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51422 1 -     66298 g
i Pteronotus_parnellii.KE847780.1                        I 4 C 0
s Pteropus_alecto.KB030862.1                               5840144 1 -  28871421 c
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536655 1 -   4952924 c
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26203 1 +     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152695 1 -   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7070 1 +     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52474 1 +     55069 G
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914041 1 +   3329780 g
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74053 1 -    116970 c
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7141 1 +     16473 G
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Semnopithecus_entellus.k141_158471                         24522 1 +     27374 A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28036 1 +     58920 A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14532 1 -     45317 A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22191 1 -     42441 A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24869 1 -     29113 A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27943 1 -     48123 A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857577 1 -   1910179 A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670613 1 +  18376816 a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Sus_scrofa.CM000828.4                                    6643073 1 +  69701581 G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390460 1 +   1523678 A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13412 1 +     22964 c
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1983 1 +      5583 A
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 1 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190912 1 +    199430 C
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104883 1 -    539355 C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6152 1 +      6850 A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6203 1 +     20590 a
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352416 1 - 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479444 1 -    610378 A
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_1189070                        20068 1 +     26378 A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32746 1 -     78344 A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19393 1 +     25722 A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27698 1 -     62838 A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27744 1 +     46913 A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8551 1 -     28527 A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29635 1 -     64340 A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27672 1 -     63452 A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9117 1 +     22490 A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2543 1 -      6147 A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9448 1 -     13050 A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254688 1 -   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         712 1 +     19340 A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172755 1 -    200418 G
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833421 1 -   4065304 a
i Tupaia_chinensis.KB320699.1                            I 34 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7440 1 -     70247 a
i Tupaia_tana.TupTan_flattened_line_394                  I 64 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360973 1 -  33153633 G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Varecia_rubra.k141_787544                                  24515 1 -     30710 A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23422 1 -    147434 A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75599 1 +   5488506 g
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             381 1 +      1812 G
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Erinaceus_europaeus.JH835339.1                           3665351 6 +   7059049 I
e Capromys_pilorides.CapPil_scaffold_652123                    778 0 -      1880 C
e Chinchilla_lanigera.JH722012.1                           1238110 0 -   2543920 C
e Nannospalax_galili.KL204047.1                             945473 0 +   3037898 C
e Saimiri_ustus.k141_360372                                  29505 0 -     47109 C
e Saimiri_sciureus.k141_1467173                              14353 0 -     22428 C
e Saimiri_oerstedii.k141_245838                              26950 0 -     34454 C
e Saimiri_macrodon.k141_1173117                              30259 0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       29873 0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1108306 0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            27343 0 +     75252 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005        1059 0 +      9367 C
e Octodon_degus.JH651603.1                                11054348 0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71065 0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  9593 0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   4663 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18949728 0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    98100 0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   3545 0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  17567 0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       62181 0 -     66877 C
e Cavia_porcellus.DS562891.1                               4999100 0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4995658 0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    45220 5 +    145209 I
e Echinops_telfairi.JH980293.1                            62854174 5 - 111700974 I
e Callibella_humilis.k141_1233062                             9438 0 +     18648 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   19088 0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2109401 0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            12055 0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     17084 0 +     24238 C
e Zalophus_californianus.ZalCal_flattened_line_17732         28154 0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                104261 0 -    112863 C
e Ursus_maritimus.KK499267.1                                181121 0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              5939 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3949 0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        38539 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1450959 0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                197492 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11468362 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14354378 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         7767 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             25450 0 -     74585 C
e Lycaon_pictus.CM007581.1                                41613899 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        812760 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24915346 0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45106325 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41614744 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          221609 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     8266 0 -     23171 C
e CanFam4.chr16                                           42504630 0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  4678 2 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            214919 0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20414608 0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_533409                       444 0 -       753 C
e Xerus_inauris.XerIna_scaffold_2302                        173449 0 -    224448 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    2966 0 -     21056 C
e Trichechus_manatus.JH594705.1                            6479716 0 -  10818551 C
e Suricata_suricatta.SurSur_flattened_line_6629             124179 0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1867659 0 +   3870691 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    48514 15 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    115243 0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           7153 0 +     21866 C
e Sapajus_apella.ctg103                                     237563 0 +   5703754 C
e Saguinus_oedipus.k141_1466288                               3903 0 -      4301 C
e Saguinus_mystax.k141_8077960                                3140 0 +      5979 C
e Saguinus_midas.LG03                                       390969 0 - 209938924 C
e Saguinus_labiatus.k141_2380921                              1533 0 -      4390 C
e Saguinus_inustus.k141_2469308                               3191 0 +      5932 C
e Saguinus_imperator.k141_1898058                             3269 0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             3179 0 +      6077 C
e Saguinus_bicolor.k141_1429097                               3284 0 +     27962 C
e Rhinopithecus_strykeri.ctg102                             235621 0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104121379 0 + 195417433 C
e Rhinopithecus_bieti.k119_778604                              771 0 +      7119 C
e Rattus_norvegicus.chr16                                 37022029 15 -  90668790 I
e Puma_concolor.QAVW01001104.1                            18098404 0 +  38429054 C
e Psammomys_obesus.NESX01036366.1                            36738 15 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_255930                 2709 0 +      3019 C
e Presbytis_mitrata.k141_584736                              44019 0 -     80239 C
e Presbytis_comata.k141_1230337                              26825 6 +     69807 I
e Plecturocebus_moloch.k141_1031110                          43296 0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          41829 0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      13913 0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          6976 0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          41930 0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          6979 0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     42281 0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       41887 0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          2483 0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        7399 0 +     39866 C
e Pithecia_vanzolinii.k141_1369553                           31001 0 +     51125 C
e Pithecia_pithecia.tarseq_165                              555987 0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           31017 0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         31257 0 +     63561 C
e Pithecia_hirsuta.k141_640380                               30981 0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          5238 0 -     25401 C
e Pithecia_albicans.k141_1239476                             64145 0 +    207309 C
e Peromyscus_maniculatus.KI615324.1                         246131 15 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14359 0 +     78924 C
e Panthera_tigris.KE722367.1                               3971747 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18461090 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   23764 0 -    230217 C
e Oryctolagus_cuniculus.CM000791.1                       107102921 0 - 174332312 C
e Onychomys_torridus.OnyTor_scaffold_28377                    2933 15 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    92041 27 -    140218 I
e Ochotona_princeps.JH802162.1                             2550449 0 -   3988456 C
e Noctilio_leporinus.NocLep_scaffold_7894                   127490 0 -    149072 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             82569 0 -     86153 C
e Mus_spretus.CM004101.1                                  39496113 12 + 130317789 I
e Mus_pahari.LT608297.1                                   58216682 14 +  89631738 I
e Mus_musculus.chr8                                       41686817 12 + 129401213 I
e Mus_caroli.LT608237.1                                   35592432 12 + 120012414 I
e Mungos_mungo.MunMun_flattened_line_18455                   17775 0 -     63510 C
e Mirza_zaza.k141_766280                                     51639 0 -     62432 C
e Microtus_ochrogaster.CM001695.1                         15961703 8 +  27267610 I
e Microcebus_murinus.CM007674.1                           74983850 0 +  93316391 C
e Mico_schneideri.k141_1877700                                     18363 0 -     26561 C
e Mico_humeralifer.k141_1180625                              10049 0 -     12984 C
e Mico_argentatus.k141_582562                                 9547 0 +     17804 C
e Mesocricetus_auratus.KB708134.1                         17428487 52 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 49397 15 -    140813 I
e Marmota_marmota.CZRN01000018.1                           7500299 0 +  40650429 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                222451 10 -    270270 I
e Loxodonta_africana.GL010049.1                           39080257 0 +  43346337 C
e Lepilemur_septentrionalis.k141_360456                       8246 0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          8247 0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              8236 0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          8240 0 +     29618 C
e Leontopithecus_rosalia.k141_349454                         10762 0 -     12945 C
e Leontopithecus_chrysomelas.k141_1327670                     9381 0 -     11567 C
e Leontocebus_nigricollis.k141_3905062                        3005 0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           3175 0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        3421 0 -     13097 C
e Lagothrix_lagothricha.k141_246028                          42508 0 +    110728 C
e Jaculus_jaculus.JH725527.1                               1238848 0 +   9596543 C
e Ictidomys_tridecemlineatus.JH393364.1                     386079 0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       3716 0 -    135385 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  68938 0 +     83186 C
e Heterohyrax_brucei.HetBruBak_scaffold_128297                6330 0 +      6687 C
e Helogale_parvula.HelPar_flattened_line_2585                30023 0 -    327341 C
e Graphiurus_murinus.GraMur_scaffold_10447                    1231 0 -     78134 C
e Glis_glis.GliGli_scaffold_33859                            33740 0 -     36801 C
e Felis_nigripes.FelNig_flattened_line_31944                 26939 0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185115838 0 - 205367284 C
e Ellobius_talpinus.LOJH01026522.1                           12245 15 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          30258 21 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238977 0 -    607251 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  138500 19 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  663712 19 -   1390856 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    644247 0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              3594 0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213113980 146 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 43541 15 -     83289 I
e Condylura_cristata.JH655891.1                           35806430 0 +  53390261 C
e Chiropotes_sagulatus.k141_1113111                           7340 0 +     34062 C
e Chiropotes_israelita.k141_313004                           41769 0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           3286 0 +      5346 C
e Cheracebus_torquatus.k141_890198                           18692 0 +     39636 C
e Cheracebus_regulus.k141_471822                             18899 0 +    216457 C
e Cheracebus_lugens.k141_1179667                             18644 0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             8231 0 -     32913 C
e Cheirogaleus_medius.k141_759766                             4380 0 -     15404 C
e Cheirogaleus_major.k141_666340                             29863 0 -     33796 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18256 19 +     27315 I
e Cebus_unicolor.k141_1654760                                66329 0 -     89041 C
e Cebus_olivaceus.k141_1404781                                7234 0 -     34880 C
e Cebus_albifrons.Contig27                                  370345 0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               42414 0 +     53515 C
e Cebuella_niveiventris.k141_592277                           4356 0 -     12580 C
e Castor_canadensis.CasCan_scaffold_39952                    26939 0 -     39886 C
e Callithrix_kuhlii.k119_102356                                958 0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165453436 0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            1043 0 -      8861 C
e Callimico_goeldii.k141_1609886                              8977 0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         19871 0 +    119600 C
e Cacajao_hosomi.k141_81245                                  19958 0 +     95584 C
e Cacajao_calvus.k141_89051                                  42432 0 -     91139 C
e Cacajao_ayresi.k141_96119                                   7138 0 +     28062 C
e Ateles_paniscus.k141_866194                                22250 0 -     33135 C
e Ateles_marginatus.k141_970259                              48191 0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              32821 0 +     44353 C
e Ateles_chamek.k141_615173                                   5268 0 -     28759 C
e Ateles_belzebuth.k141_1572163                              10131 0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               273964 0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      15302 0 -     32367 C
e Aotus_vociferans.k141_1514463                                916 0 -     17186 C
e Aotus_trivirgatus.k141_318729                               1356 0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             1081 0 -     15923 C
e Aotus_azarae.k141_887050                                     456 0 +     17741 C
e Alouatta_seniculus.k141_928287                             32213 0 +     42133 C
e Alouatta_puruensis.k141_251022                              8077 0 +     30854 C
e Alouatta_palliata.k141_638677                              45901 0 +     70886 C
e Alouatta_nigerrima.k141_376068                             40255 0 +     45454 C
e Alouatta_macconnelli.k141_361275                           23264 0 -     24835 C
e Alouatta_juara.k141_1687208                                41630 0 -     64179 C
e Alouatta_discolor.k141_2561099                             43180 0 +     55831 C
e Alouatta_caraya.k141_1109140                               43741 0 -     78289 C
e Alouatta_belzebul.k141_1011583                             71502 0 -     84148 C
e Allactaga_bullata.AllBul_scaffold_20030                    17337 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     24389 32 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           812143 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4750 3 +     36723 CA----C
s Allenopithecus_nigroviridis.k141_3755588                   47066 3 +     53615 CA----C
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43027 3 +     44087 CA----C
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15652 3 -     21945 CA----C
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17335 3 +     32033 CA----C
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71502 2 -     84148 -A----C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43741 2 -     78289 -A----C
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43180 2 +     55831 -A----C
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41630 2 -     64179 -A----C
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23264 2 -     24835 -A----C
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40255 2 +     45454 -A----C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45901 2 +     70886 -A----C
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8077 2 +     30854 -A----C
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32213 2 +     42133 -A----C
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                     456 2 +     17741 -A----C
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1081 2 -     15923 -A----C
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1356 2 -     16391 -A----C
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                916 2 -     17186 -A----C
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18837 3 -     45910 CA----T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273964 2 +  21539123 -A----C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10131 2 +     48076 -A----C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5268 2 -     28759 -A----C
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32821 2 +     44353 -A----C
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48191 2 -     71267 -A----C
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22250 2 -     33135 -A----C
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5481 3 +     11645 ga----c
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5491 3 -     19611 ga----c
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   7138 2 +     28062 -A----C
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42432 2 -     91139 -A----C
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19958 2 +     95584 -A----C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19871 2 +    119600 -A----C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9438 2 +     18648 -A----C
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8977 2 -     13885 -A----C
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1043 2 -      8861 -A----C
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453436 2 + 189096842 -A----C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                958 2 +      8664 -A----C
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269529 3 +    496798 ca----c
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cebuella_niveiventris.k141_592277                           4356 2 -     12580 -A----C
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42414 2 +     53515 -A----C
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370345 2 -  26074798 -A----C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7234 2 -     34880 -A----C
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66329 2 -     89041 -A----C
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1458 3 -      5494 ca----c
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                140249 3 -   4669795 ca----c
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43991 3 +     47900 CA----C
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43816 3 -     44860 CA----C
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43804 3 -    148725 CA----C
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25981 3 -     40656 CA----C
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5947 3 +     20796 CA----C
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11064 3 -     17524 CA----C
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26786 3 -     34525 CA----C
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10567 3 -     25376 CA----C
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363163 3 -  39242232 CA----C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268879 3 +  21565898 CA----C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31253 3 -     45857 CA----C
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26152 3 -     32606 CA----C
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2311 3 +      8499 CA----C
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24709 3 +     70610 CA----C
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21678 3 +     36323 CA----C
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8231 2 -     32913 -A----C
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18644 2 -     40346 -A----C
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18899 2 +    216457 -A----C
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18692 2 +     39636 -A----C
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3286 2 +      5346 -A----C
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41769 2 -    112038 -A----C
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7340 2 +     34062 -A----C
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342569 3 +  18827391 CA----C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9116 3 -     44032 CA----C
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303893 3 - 135778131 ca----c
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408322 3 -   2368649 ca----c
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378198 3 - 200372422 CA----C
i Colobus_guereza.LG01                                   I 1 C 0
s Colobus_polykomos.k141_906115                               1747 3 -     84244 CA----C
i Colobus_polykomos.k141_906115                          I 1 C 0
s Daubentonia_madagascariensis.ctg71                        291802 3 +  12879189 CA----C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Erythrocebus_patas.Contig38                               262096 3 +  21539334 CA----C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               13999 3 -     24895 AA----C
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41708 3 -     70999 AA----C
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85670 3 +    112731 AA----C
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42239 3 +     68309 AA----C
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52565 3 -     65740 AA----C
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23194 3 -     75513 AA----C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47391 3 -     97555 AA----C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4116 3 +     30972 AA----C
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41836 3 -     52037 AA----C
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58238 3 -    111500 AA----C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg3793                                     124253 3 -    137831 CG----C
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7798 3 +     22493 CG----C
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19865 3 -     32986 CA----C
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 398 5 -     28519 CA--TGC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Gorilla_beringei.k141_3358147                               5052 3 -      8343 CA----C
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254064 3 - 186649187 ca----c
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13924 3 -     40692 AA----C
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35326 3 +     49394 AA----C
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60194 3 -     66874 AA----C
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9068 3 -     42923 AA----C
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16068 3 -     53142 AA----C
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Hoolock_leuconedys.ctg274                                    142072 3 -    630532 CA----C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               5107 3 +     12352 CA----C
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12291 3 +     55766 CA----C
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051889 3 + 191637585 CA----C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800767 3 +  11177569 CA----C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_2415743                                    1628 3 +     11955 ga----c
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42508 2 +    110728 -A----C
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14758717 3 +  30322482 AA----C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3421 2 -     13097 -A----C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3175 2 +      5940 -A----C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3005 2 -      5717 -A----C
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9381 2 -     11567 -A----C
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10762 2 -     12945 -A----C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lophocebus_aterrimus.ctg367                               333134 3 -   1826925 CA----C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9818 3 +     19643 CA----C
i Loris_lydekkerianus.k141_2031736                       C 0 I 16
s Loris_tardigradus.ctg83                                  5043481 3 -   6120653 ca----c
i Loris_tardigradus.ctg83                                C 0 I 16
s Macaca_arctoides.k141_1757516                              44518 3 -     61512 CA----C
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372180 3 -  60120075 CA----C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24443 3 +     30207 CA----C
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21546 3 -     24934 CA----C
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24396 3 +     30527 CA----C
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35572 3 -     50087 CA----C
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45316 3 +     51645 CA----C
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414518 3 - 187317192 ca----c
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398749 3 +  25927173 ca----c
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47921 3 -     62418 CA----C
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  459 3 +     14901 CA----C
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44393 3 +     59329 CA----C
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270301 3 +    668171 CA----C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  577 3 +      1732 CA----C
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2099 3 +     17132 CA----C
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321598 3 +  24302211 CA----C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356430 3 -    752769 CA----C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_582562                                 9547 2 +     17804 -A----C
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10049 2 -     12984 -A----C
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18363 2 -     26561 -A----C
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21606 3 -     27822 CA----C
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Nasalis_larvatus.k141_1350636                              28247 3 +     34575 CA----C
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           53000 3 -    132029 CA----C
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9095 3 -     16345 CA----C
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14980 3 +     22201 CA----C
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413201 3 -  22158432 CA----C
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25378 3 -     54323 CA----C
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93635845 7 + 196305487 CACACAC
i Nycticebus_bengalensis.LG01                            C 0 I 20
s Nycticebus_coucang.k141_3846325                             2603 3 -      3937 CA----C
i Nycticebus_coucang.k141_3846325                        C 0 I 20
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564110 3 - 199412804 CA----C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 18
s Otolemur_crassicaudatus.k141_649260                        39414 3 -     51505 CG----C
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352417 3 +   1103335 cg----c
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.CM009242.2                               1472093 3 - 189151597 ca----c
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   242431 3 - 183742232 ca----c
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8893 3 +     21308 CA----C
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291467 3 -  20919399 CA----C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21541 3 -     27687 CA----C
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14687 3 +     16796 CA----C
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21498 3 -     23640 CA----C
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25624 3 +     31479 AA----C
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17993 3 -     24908 AA----C
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Piliocolobus_badius.k141_2704958                            1705 3 +     55023 CA----C
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1255 3 -     89929 CA----C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1844 3 +     40849 CA----T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253508 3 +  14605196 ca----c
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             64145 2 +    207309 -A----C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5238 2 -     25401 -A----C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30981 2 +     58159 -A----C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31257 2 +     63561 -A----C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31017 2 +     51148 -A----C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555987 2 -   4542175 -A----C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31001 2 +     51125 -G----C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7399 2 +     39866 -A----C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2483 2 -      9282 -A----C
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41887 2 -     87950 -A----C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42281 2 -     88961 -A----C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6979 2 -     39403 -A----C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41930 2 +     87928 -A----C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6976 2 -     60166 -A----C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13913 2 -     67232 -A----C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41829 2 -     90634 -A----C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43296 2 +     89403 -A----C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177217 3 - 189387572 ca----c
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192034 3 -   9816681 CA----C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26831 2 +     69807 -A----C
i Presbytis_comata.k141_1230337                          I 6 C 0
s Prolemur_simus.MPIZ01000396.1                            1981872 3 +   4620579 aa----c
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565377 3 -   2598838 ga----c
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3015 3 -      7103 ga----c
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3612 3 -     11706 ga----c
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7350 3 -     30655 ga----c
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33663 3 +     46564 ga----c
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93942 3 -     98465 ga----c
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7581 3 +     35169 ga----c
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26204 3 +     91421 CA----G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152696 3 -   7812017 CA----G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7071 3 +     72585 CA----G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                              771 2 +      7119 -A----C
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121379 2 + 195417433 -a----c
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235621 2 -   7961872 -A----C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_1429097                               3284 2 +     27962 -A----C
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3179 2 +      6077 -A----C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3269 2 +      5971 -A----C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3191 2 +      5932 -A----C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1533 2 -      4390 -A----C
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390969 2 - 209938924 -A----C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3140 2 +      5979 -A----C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3903 2 -      4301 -A----C
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108306 2 + 121099817 -a----c
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29873 2 -     47369 -A----C
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30259 2 -     79414 -A----C
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26950 2 -     34454 -A----C
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14353 2 -     22428 -A----C
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29505 2 -     47109 -A----C
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237563 2 +   5703754 -A----C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7153 2 +     21866 -A----C
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         24523 3 +     27374 CA----C
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28037 3 +     58920 CA----C
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14533 3 -     45317 CA----C
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22192 3 -     42441 CA----C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24870 3 -     29113 CA----C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27944 3 -     48123 CA----C
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390461 3 +   1523678 CA----C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1780720                                6153 3 +      6850 CA----C
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6204 3 +     20590 ca----c
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352417 3 - 186847797 ga----c
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20069 3 +     26378 CA----C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32747 3 -     78344 CA----C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19394 3 +     25722 CA----C
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27699 3 -     62838 CA----C
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27745 3 +     46913 CA----C
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8552 3 -     28527 CA----C
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29636 3 -     64340 CA----C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27673 3 -     63452 CA----C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9118 3 +     22490 CA----C
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2544 3 -      6147 CA----C
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9449 3 -     13050 CA----C
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254689 3 -   6242583 CA----C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         713 3 +     19340 CA----C
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833422 3 -   4065304 ca----c
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7441 3 -     70247 ca----c
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  24516 3 -     30710 AA----C
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23423 3 -    147434 AA----C
i Varecia_variegata.k141_289850                          C 0 C 0
e Sorex_araneus.JH798187.1                                 4670614 0 +  18376816 C
e Erinaceus_europaeus.JH835339.1                           3665351 6 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846               6706 0 +     12657 C
e Capromys_pilorides.CapPil_scaffold_652123                    778 0 -      1880 C
e Chinchilla_lanigera.JH722012.1                           1238110 0 -   2543920 C
e Nannospalax_galili.KL204047.1                             945473 0 +   3037898 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            27343 0 +     75252 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005        1059 0 +      9367 C
e Octodon_degus.JH651603.1                                11054348 0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71065 0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                  9593 0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   4663 0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18949728 0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                    98100 0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   3545 0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  17567 0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       62181 0 -     66877 C
e Cavia_porcellus.DS562891.1                               4999100 0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4995658 0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    45220 5 +    145209 I
e Echinops_telfairi.JH980293.1                            62854174 5 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_171931              12902 1 -     14239 I
e Elephantulus_edwardii.JH947257.1                         9107790 1 -  10337057 I
e Desmodus_rotundus.KZ672289.1                            11864428 0 -  20541912 C
e Choloepus_hoffmanni.KN194906.1                            605607 0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_70559                 14031 0 +     15858 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   19088 0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2109401 0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            12055 0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     17084 0 +     24238 C
e Carollia_perspicillata.CarPer_scaffold_668536                625 0 -      1021 C
e Zalophus_californianus.ZalCal_flattened_line_17732         28154 0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                104261 0 -    112863 C
e Ursus_maritimus.KK499267.1                                181121 0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              5939 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3949 0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        38539 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1450959 0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                197492 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11468362 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14354378 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         7767 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             25450 0 -     74585 C
e Lycaon_pictus.CM007581.1                                41613899 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        812760 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24915346 0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45106325 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41614744 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          221609 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     8266 0 -     23171 C
e CanFam4.chr16                                           42504630 0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  4678 2 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            214919 0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20414608 0 +  29979442 C
e Ziphius_cavirostris.ZipCav_flattened_line_572595             382 0 +      1812 C
e Zapus_hudsonius.ZapHud_scaffold_533409                       444 0 -       753 C
e Xerus_inauris.XerIna_scaffold_2302                        173449 0 -    224448 C
e Vicugna_pacos.KN270157.1                                   75600 0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    2966 0 -     21056 C
e Tursiops_truncatus.MRVK01000835.1                       17360974 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6479716 0 -  10818551 C
e Tragulus_javanicus.TraJav_scaffold_3462                   172756 0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    479445 0 -    610378 C
e Tapirus_terrestris.TapTer_scaffold_755                    104884 0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      190913 0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                1984 0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                13413 0 +     22964 C
e Sus_scrofa.CM000828.4                                    6643074 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             124179 0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1867659 0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1857578 0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    48514 15 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    115243 0 +    313613 C
e Saiga_tatarica.SaiTat_scaffold_39512                        7142 0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74054 0 -    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                       2914042 0 +   3329780 C
e Rattus_norvegicus.chr16                                 37022029 15 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 52475 0 +     55069 C
e Puma_concolor.QAVW01001104.1                            18098404 0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3536656 0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5840145 0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            51423 0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            36738 15 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_255930                 2709 0 +      3019 C
e Presbytis_mitrata.k141_584736                              44019 0 -     80239 C
e Platanista_gangetica.PlaMin_flattened_line_167872           4163 0 -      8168 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             3051 0 +     22231 C
e Phocoena_phocoena.PhoPho_flattened_line_46867              12073 0 -     15039 C
e Peromyscus_maniculatus.KI615324.1                         246131 15 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14359 0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1614988 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3971747 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18461090 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   23764 0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       4069 0 +     17875 C
e Ovis_aries.CM001607.2                                   26403550 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107102921 0 - 174332312 C
e Orcinus_orca.KB316932.1                                  8096231 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    2933 15 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    92041 27 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          13556 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         435556 0 -    630418 C
e Ochotona_princeps.JH802162.1                             2550449 0 -   3988456 C
e Noctilio_leporinus.NocLep_scaffold_7894                   127490 0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1226947 0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118994 0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_66571                         1518 0 +     18357 C
e Myotis_lucifugus.GL429869.1                               382706 0 +   4330536 C
e Myotis_davidii.KB100139.1                                4386879 0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9792749 0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             82569 0 -     86153 C
e Mus_spretus.CM004101.1                                  39496113 12 + 130317789 I
e Mus_pahari.LT608297.1                                   58216682 14 +  89631738 I
e Mus_musculus.chr8                                       41686817 12 + 129401213 I
e Mus_caroli.LT608237.1                                   35592432 12 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          38467 0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   17775 0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  24791 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 178538 0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   352777 0 +    437263 C
e Mirza_zaza.k141_766280                                     51639 0 -     62432 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             41403 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6362496 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15961703 8 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                184373 0 +    200668 C
e Microcebus_murinus.CM007674.1                           74983850 0 +  93316391 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     80678 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17428487 52 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 49397 15 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       149651 0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7500299 0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             220097 0 +    317179 C
e Manis_javanica.JSZB01003497.1                             672809 0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                222451 10 -    270270 I
e Loxodonta_africana.GL010049.1                           39080257 0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             334379 0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                       8246 0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          8247 0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              8236 0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          8240 0 +     29618 C
e Lasiurus_borealis.LasBor_scaffold_26245                    31423 0 -     49555 C
e Kogia_breviceps.KogBre_flattened_line_3970                 65093 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1238848 0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447                2845 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     386079 0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       3716 0 -    135385 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  68938 0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_164997                301 0 -      2730 C
e Hipposideros_armiger.JXIK01000431.1                      1553388 0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                6873 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_128297                6330 0 +      6687 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  8430 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                30023 0 -    327341 C
e Graphiurus_murinus.GraMur_scaffold_10447                    1231 0 -     78134 C
e Glis_glis.GliGli_scaffold_33859                            33740 0 -     36801 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      90672 0 -     95226 C
e Felis_nigripes.FelNig_flattened_line_31944                 26939 0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185115838 0 - 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_118172             4593 0 +      7672 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           64380 0 -    133382 C
e Equus_przewalskii.KK951119.1                              411307 0 -    498745 C
e Equus_caballus.CM000403.2                               21374521 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3040597 0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12578117 0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           12245 15 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          30258 21 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238977 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               5497 0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  138500 19 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  663712 19 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18625034 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    644247 0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              3594 0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213113980 146 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 43541 15 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          2036 1 -      8242 I
e Condylura_cristata.JH655891.1                           35806430 0 +  53390261 C
e Cheirogaleus_medius.k141_759766                             4380 0 -     15404 C
e Cheirogaleus_major.k141_666340                             29863 0 -     33796 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18256 19 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     78807 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    26939 0 -     39886 C
e Capra_hircus.CM004588.1                                 26590596 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27408323 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1208212 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4664552 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7630266 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1529252 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27544227 0 -  45695690 C
e Bos_mutus.JH880303.1                                      754088 0 +   1948126 C
e Bos_indicus.CM003047.1                                  20355520 0 +  48749331 C
e Bison_bison.KN261452.1                                     21134 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     85602 0 +    124022 C
e Balaenoptera_bonaerensis.DF507193.1                         3711 0 -      4711 C
e Balaenoptera_acutorostrata.KI537508.1                    7956502 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      15302 0 -     32367 C
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C
e Antilocapra_americana.AntAmePen_scaffold_21030             49708 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      176407 0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1584593 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    17337 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     24389 32 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           812143 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4753  5 +     36723 A--------------------------G--AC----A
s Acinonyx_jubatus.LLWD01001279.1                           812143  9 +   1699592 a--------------------------c--acacaca
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414608  3 +  29979442 a--------------------------g--a------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214919  3 +    347723 a--------------------------g--a------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17337  5 -     61208 a--------------------------c--ac----a
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47069  5 +     53615 A--------------------------G--AC----A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43030  5 +     44087 A--------------------------G--AC----A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15655  5 -     21945 A--------------------------G--AC----A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17338  5 +     32033 A--------------------------G--AC----A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71504  5 -     84148 A--------------------------G--AC----A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43743  5 -     78289 A--------------------------G--AC----A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43182  5 +     55831 A--------------------------G--AC----A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41632  5 -     64179 A--------------------------G--AC----A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23266  5 -     24835 A--------------------------G--AC----A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40257  5 +     45454 A--------------------------G--AC----A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45903  5 +     70886 A--------------------------G--AC----A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8079  5 +     30854 A--------------------------G--AC----A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32215  5 +     42133 A--------------------------G--AC----A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584593  5 +   2318259 G--------------------------C--AC----A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176407  5 -    412891 A--------------------------C--AC----A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49708  5 -     68529 G--------------------------C--AT----A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     458  5 +     17741 A--------------------------G--AC----A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1083  5 -     15923 A--------------------------G--AC----G
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1358  5 -     16391 A--------------------------G--AC----A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                918  5 -     17186 A--------------------------G--AC----A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15302  5 -     32367 A--------------------------A--AC----T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18840  3 -     45910 ------------------------------AC----A
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4680  4 -     15198 ---------------------------C--AC----A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 2 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273966  5 +  21539123 A--------------------------G--AC----A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10133  5 +     48076 A--------------------------G--AC----A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5270  5 -     28759 A--------------------------G--AC----A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32823  5 +     44353 A--------------------------G--AC----A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48193  5 -     71267 A--------------------------G--AC----A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22252  5 -     33135 A--------------------------G--AC----A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5484  5 +     11645 a--------------------------c--ac----a
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5494  5 -     19611 a--------------------------c--ac----a
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956502  5 -  23207421 a--------------------------c--ac----a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3711  5 -      4711 a--------------------------c--ac----a
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85602  5 +    124022 G--------------------------C--AC----A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21134  5 +    288883 G--------------------------C--AC----A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355520  5 +  48749331 G--------------------------C--AC----A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754088  5 +   1948126 G--------------------------C--AC----A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544227  5 -  45695690 G--------------------------C--AC----A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529252  5 -   4408762 G--------------------------C--AC----A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7140  5 +     28062 A--------------------------G--AC----A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42434  5 -     91139 A--------------------------G--AC----A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19960  5 +     95584 A--------------------------G--AC----A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19873  5 +    119600 A--------------------------G--AC----A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9440  5 +     18648 A--------------------------G--AC----A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8979  5 -     13885 A--------------------------G--AC----A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1045  5 -      8861 A--------------------------G--AC----A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453438  5 + 189096842 A--------------------------G--AC----A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                960  5 +      8664 A--------------------------G--AC----A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630266  5 +  17673402 A--------------------------C--AC----A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664552  5 +   7040546 A--------------------------C--AC----A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208212  5 +   1652518 A--------------------------C--AC----A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504630  3 +  60362399 A--------------------------C--A------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8266  3 -     23171 A--------------------------C--A------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221609  3 +   9314153 a--------------------------c--a------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614744  3 +  59632846 a--------------------------c--a------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106325  3 -  63665305 a--------------------------c--a------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408323  5 -  46296322 G--------------------------C--AC----A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590596  5 +  44709034 G--------------------------C--AC----A
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    778  5 -      1880 G--------------------------G--ac----a
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269532  4 +    496798 a--------------------------c--ac-----
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                625  5 -      1021 A--------------------------C--AC----A
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26939  5 -     39886 C--------------------------A--AT----A
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78807  5 -    217609 A--------------------------C--AC----A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995658  5 +  23392119 a--------------------------g--ac----a
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999100  5 +  23407841 a--------------------------g--ac----a
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62181  5 -     66877 A--------------------------G--AC----A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4358  5 -     12580 A--------------------------G--AC----A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42416  5 +     53515 A--------------------------G--AC----A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370347  5 -  26074798 A--------------------------G--AC----A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7236  5 -     34880 A--------------------------G--AC----A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66331  5 -     89041 A--------------------------G--AC----A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1461  5 -      5494 a--------------------------c--ac----a
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491442  3 -  27778364 ------------------------------ac----a
i Ceratotherium_simum.JH767749.1                         I 19 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18275  3 +     27315 ------------------------------AC----A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 19 C 0
s Cercocebus_atys.KQ010504.1                                140252  5 -   4669795 a--------------------------g--ac----a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43994  5 +     47900 A--------------------------G--AC----A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43819  5 -     44860 A--------------------------G--AC----A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43807  5 -    148725 A--------------------------G--AC----A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25984  5 -     40656 A--------------------------G--AC----A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5950  5 +     20796 A--------------------------G--AC----A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11067  5 -     17524 A--------------------------G--AC----A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26789  5 -     34525 A--------------------------G--AC----A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10570  5 -     25376 A--------------------------G--AC----A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363166  5 -  39242232 A--------------------------G--AC----A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268882  5 +  21565898 A--------------------------G--AC----A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31256  5 -     45857 A--------------------------G--AC----A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26155  5 -     32606 A--------------------------G--AC----A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2314  5 +      8499 A--------------------------G--AC----A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24712  5 +     70610 A--------------------------G--AC----A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21681  5 +     36323 A--------------------------G--AC----A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             29863  5 -     33796 A--------------------------C--AC----A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4380  5 -     15404 A--------------------------C--AC----A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8233  5 -     32913 A--------------------------G--AC----A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18646  5 -     40346 A--------------------------G--AC----A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18901  5 +    216457 A--------------------------G--AC----A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18694  5 +     39636 A--------------------------G--AC----A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238110  5 -   2543920 a--------------------------a--ac----a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3288  5 +      5346 A--------------------------G--AC----A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41771  5 -    112038 A--------------------------G--AC----A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7342  5 +     34062 A--------------------------G--AC----A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342572  5 +  18827391 A--------------------------G--AC----A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9119  5 -     44032 A--------------------------G--AC----A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303896  5 - 135778131 a--------------------------g--ac----a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14031  5 +     15858 A--------------------------C--AT----T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605607  5 -    839153 A--------------------------C--AT----T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408325  5 -   2368649 a--------------------------g--at----a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378201  5 - 200372422 A--------------------------G--AT----A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1750  5 -     84244 A--------------------------G--AT----A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806430  3 +  53390261 ---------------------------C--AC-----
i Condylura_cristata.JH655891.1                          C 0 I 134
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2037  4 -      8242 ---------------------------C--AC----A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6706  1 +     12657 A------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3594  5 +     87169 a--------------------------c--ac----a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644247  5 -   1526836 A--------------------------A--AT----G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17567  5 +     50838 A--------------------------G--at----a
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3545  5 +     36344 A--------------------------G--Ag----a
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27343  5 +     75252 A--------------------------G--GC----A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109401  5 -   2246927 C--------------------------C--AT----T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291805  5 +  12879189 A--------------------------G--AC----A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625034  5 -  35494412 A--------------------------C--AC----A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864428  5 -  20541912 A--------------------------C--AC----A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663731  3 -   1390856 ------------------------------ag----a
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 19 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138519  3 -    198055 ------------------------------AC----A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 19 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98100  5 -    115145 a--------------------------g--ac----a
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949728  5 -  37912305 a--------------------------a--at----a
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4663  5 -     10735 A--------------------------A--AT----A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9593  5 +     14636 a--------------------------g--ac----a
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5497  5 +     19438 a--------------------------c--gg----g
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107791  5 -  10337057 A--------------------------C--AG----G
i Elephantulus_edwardii.JH947257.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               24915346  7 +  41312741 a--gaca--------------------g--a------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578117  5 +  14770903 a--------------------------c--ac----a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040597  5 -   4378816 a--------------------------c--ac----a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374521  5 +  39960074 a--------------------------c--ac----a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411307  5 -    498745 a--------------------------c--ac----a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665357  2 +   7059049 -------------------------------T----G
i Erinaceus_europaeus.JH835339.1                         I 6 C 0
s Erythrocebus_patas.Contig38                               262099  5 +  21539334 A--------------------------G--AC----A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64380  5 -    133382 A--------------------------C--AC----A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4593  5 +      7672 A--------------------------C--AC----A
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14002  5 -     24895 A--------------------------C--AC----A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41711  5 -     70999 A--------------------------C--AC----A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85673  5 +    112731 A--------------------------C--AC----A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42242  5 +     68309 A--------------------------C--AC----A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52568  5 -     65740 A--------------------------C--AC----A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23197  5 -     75513 A--------------------------C--AC----A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47394  5 -     97555 A--------------------------C--AC----A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4119  5 +     30972 A--------------------------C--AC----A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41839  5 -     52037 A--------------------------C--AC----A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58241  5 -    111500 A--------------------------C--AC----A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246052  5 - 206538554 a--------------------------c--ac----a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115838  5 - 205367284 a--------------------------c--ac----a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26939  5 -     30238 A--------------------------C--AC----A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124256  5 -    137831 A--------------------------C--AC----A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7801  5 +     22493 A--------------------------C--AC----A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19868  5 -     32986 A--------------------------C--AC----A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 403  5 -     28519 A--------------------------G--AC----A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90672  5 -     95226 g--------------------------c--ac----a
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33740  4 -     36801 A--------------------------A--AC-----
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5055  5 -      8343 A--------------------------G--AC----A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254067  5 - 186649187 a--------------------------g--ac----a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1231  4 -     78134 A--------------------------A--AC-----
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13927  5 -     40692 A--------------------------C--AC----A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35329  5 +     49394 A--------------------------C--AC----A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60197  5 -     66874 A--------------------------C--AC----A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9071  5 -     42923 A--------------------------C--AC----A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16071  5 -     53142 A--------------------------C--AC----A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30023  5 -    327341 G--------------------------C--AC----A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8430  5 +     48891 G--------------------------C--AC----A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6330  1 +      6687 ------------------------------------A
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6873  1 -     36432 A------------------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553388  7 -   1711038 a--------------------------cacac----a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                301  7 -      2730 a--------------------------cacac----a
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142075  5 -    630532 A--------------------------A--AC----A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68938  3 +     83186 ------------------------------AC----A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71065  5 +    143317 a--------------------------g--ac----a
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5110  5 +     12352 A--------------------------G--AC----A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12294  5 +     55766 A--------------------------G--AC----A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051892  5 + 191637585 A--------------------------G--AC----A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800770  5 +  11177569 A--------------------------G--AC----A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3716  5 -    135385 A--------------------------A--AC----A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386079  5 +   7955117 a--------------------------g--ac----c
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Indri_indri.k141_2415743                                    1631  5 +     11955 a--------------------------c--ac----a
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2845  3 -     16823 A--------------------------C--A------
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238848  5 +   9596543 a--------------------------c--ac----a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65093  5 -     97402 A--------------------------C--AC----A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42510  5 +    110728 A--------------------------G--AT----A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    31423  5 -     49555 a--------------------------c--ac----a
i Lasiurus_borealis.LasBor_scaffold_26245                C 0 C 0
s Lemur_catta.scaffold_24                                 14758720  5 +  30322482 A--------------------------C--AC----A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3423  5 -     13097 A--------------------------G--AC----A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3177  5 +      5940 A--------------------------G--AC----A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3007  5 -      5717 A--------------------------G--AC----A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9383  5 -     11567 A--------------------------G--AC----A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10764  5 -     12945 A--------------------------G--AC----A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8240  1 +     29618 A------------------------------------
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8236  1 +     31569 A------------------------------------
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8247  1 +     24756 A------------------------------------
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8246  1 +     16388 A------------------------------------
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812760  3 -   3914936 a--------------------------g--a------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17084  5 +     24238 A--------------------------G--AC----A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             334379  5 +    662738 A------------------------CAC--A------
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333137  5 -   1826925 A--------------------------G--AC----A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9837  5 +     19643 A--------------------------C--AC----A
i Loris_lydekkerianus.k141_2031736                       I 16 C 0
s Loris_tardigradus.ctg83                                  5043500  5 -   6120653 a--------------------------c--ac----a
i Loris_tardigradus.ctg83                                I 16 C 0
s Loxodonta_africana.GL010049.1                           39080257  1 +  43346337 ------------------------------------G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613899  3 +  59628241 a--------------------------c--a------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44521  5 -     61512 A--------------------------G--AC----A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372183  5 -  60120075 A--------------------------G--AC----A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24446  5 +     30207 A--------------------------G--AC----A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21549  5 -     24934 A--------------------------G--AC----A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24399  5 +     30527 A--------------------------G--AC----A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35575  5 -     50087 A--------------------------G--AC----A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45319  5 +     51645 A--------------------------G--AC----A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414521  5 - 187317192 a--------------------------g--ac----a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398752  5 +  25927173 a--------------------------g--ac----a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47924  5 -     62418 A--------------------------G--AC----A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  462  5 +     14901 A--------------------------G--AC----A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44396  5 +     59329 A--------------------------G--AC----A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270304  5 +    668171 A--------------------------G--AC----A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  580  5 +      1732 A--------------------------G--AC----A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2102  5 +     17132 A--------------------------G--AC----A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321601  5 +  24302211 A--------------------------G--AC----A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356433  5 -    752769 A--------------------------G--AC----A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672809  5 -    737560 a--------------------------c--ac----a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220097  5 +    317179 a--------------------------c--ac----a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500299  5 +  40650429 A--------------------------G--AC----C
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                       149651  5 +    207569 a--------------------------c--ac----a
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25450  7 -     74585 A----------------------AACAG--A------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80678  5 +     93471 A--------------------------C--AC----A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9549  5 +     17804 A--------------------------G--AC----A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10051  5 -     12984 A--------------------------G--AC----A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18365  5 -     26561 A--------------------------G--AC----A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983850  1 +  93316391 a------------------------------------
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184373  5 +    200668 A--------------------------C--AC----A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362496  5 -   8254450 a--------------------------c--ac----a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41403  5 -     48117 A--------------------------C--AC----A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21609  5 -     27822 A--------------------------G--AC----A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7767  3 +     27589 A--------------------------G--A------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51639  5 -     62432 A--------------------------C--AC----A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352777  5 +    437263 A--------------------------C--AC----A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178538  5 +    366855 A--------------------------C--AC----A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24791  5 -     82753 G--------------------------C--AC----A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17775  5 -     63510 A--------------------------C--AC----A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38467  1 +     47283 ------------------------------------A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82569  4 -     86153 A--------------------------G--GC-----
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354378  7 +  14710649 a--gaca--------------------c--a------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9792749  5 +  10118263 a--------------------------c--ac----a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386879  5 +   6019432 a--------------------------c--ac----a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382706  5 +   4330536 a--------------------------c--ac----a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1518  5 +     18357 a--------------------------c--ac----a
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118994  5 +    130748 A--------------------------C--AT----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945473  5 +   3037898 a--------------------------c--ac----a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28250  5 +     34575 A--------------------------G--AC----A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468362  3 -  31847680 a--------------------------g--a------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226947  5 -   7148211 A--------------------------C--AC----A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127490  2 -    149072 -------------------------------A----A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53003  5 -    132029 A--------------------------G--AC----A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9098  5 -     16345 A--------------------------G--AC----A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14983  5 +     22201 A--------------------------G--AC----A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413204  5 -  22158432 A--------------------------G--AC----A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25381  5 -     54323 A--------------------------G--AC----A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197492  3 +   9404916 a--------------------------c--a------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635872  5 + 196305487 A--------------------------C--AC----A
i Nycticebus_bengalensis.LG01                            I 20 C 0
s Nycticebus_coucang.k141_3846325                             2626  5 -      3937 A--------------------------C--AC----A
i Nycticebus_coucang.k141_3846325                        I 20 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564131  5 - 199412804 A--------------------------C--AC----A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 18 C 0
s Ochotona_princeps.JH802162.1                             2550449  5 -   3988456 A--------------------------G--CT----A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11054348  5 -  11899542 A--------------------------G--Ac----a
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1450959  3 +   2017862 a--------------------------g--a------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435556  5 -    630418 g--------------------------c--ac----a
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13556  5 +    150152 g--------------------------c--ac----a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8096231  3 +  10937097 A--------------------------C--A------
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12903  5 -     14239 A--------------------------C--AG----A
i Orycteropus_afer.OryAfe_flattened_line_171931          I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102921  5 - 174332312 A--------------------------G--AC----A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38539  3 +    559221 a--------------------------c--a------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39417  5 -     51505 A--------------------------C--AC----A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352420  5 +   1103335 a--------------------------c--ac----a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403550  5 -  44047080 G--------------------------C--AC----A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4069  5 +     17875 G--------------------------C--AC----A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472096  5 - 189151597 a--------------------------g--ac----a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23764  3 -    230217 A--------------------------C--A------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461090  3 -  18783137 a--------------------------c--a------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971747  5 +   8748460 a--------------------------g--ac----a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614988  5 +   2937107 G--------------------------C--AC----A
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242434  5 - 183742232 a--------------------------g--ac----a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8896  5 +     21308 A--------------------------G--AC----A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291470  5 -  20919399 A--------------------------G--AC----A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21544  5 -     27687 A--------------------------G--AC----A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14690  5 +     16796 A--------------------------G--AC----A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21501  5 -     23640 A--------------------------G--AC----A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14359  5 +     78924 A--------------------------C--AC----A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25627  3 +     31479 ------------------------------AC----A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17996  3 -     24908 ------------------------------AC----A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1059  5 +      9367 A--------------------------A--AT----A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12073  5 -     15039 A--------------------------C--AC----A
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1708  5 +     55023 A--------------------------G--AC----A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1258  5 -     89929 A--------------------------G--AC----A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1847  5 +     40849 A--------------------------G--AC----A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253511  5 +  14605196 a--------------------------g--ac----a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3051  5 +     22231 a--------------------------c--ac----a
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64147  5 +    207309 A--------------------------G--AC----A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5240  5 -     25401 A--------------------------G--AC----A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30983  5 +     58159 A--------------------------G--AC----A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31259  5 +     63561 A--------------------------G--AC----A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31019  5 +     51148 A--------------------------G--AC----A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555989  5 -   4542175 A--------------------------G--AC----A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31003  5 +     51125 A--------------------------G--AC----A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4163  5 -      8168 A--------------------------C--AC----A
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7401  5 +     39866 A--------------------------G--AC----A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2485  5 -      9282 A--------------------------G--AC----A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41889  5 -     87950 A--------------------------G--AC----A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42283  5 -     88961 A--------------------------G--AC----A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6981  5 -     39403 A--------------------------G--AC----A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41932  5 +     87928 A--------------------------G--AC----A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6978  5 -     60166 A--------------------------G--AC----A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13915  5 -     67232 A--------------------------G--AC----A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41831  5 -     90634 A--------------------------G--AC----A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43298  5 +     89403 A--------------------------G--AC----A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177220  5 - 189387572 a--------------------------g--ac----a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192037  5 -   9816681 A--------------------------G--AC----A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26833  5 +     69807 A--------------------------G--AC----A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44019  5 -     80239 A--------------------------G--AC----A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2709  1 +      3019 ------------------------------------A
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981875  5 +   4620579 a--------------------------c--ac----a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565380  5 -   2598838 a--------------------------c--ac----a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3018  5 -      7103 a--------------------------c--ac----a
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3615  5 -     11706 a--------------------------c--ac----a
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7353  5 -     30655 a--------------------------c--ac----a
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33666  5 +     46564 a--------------------------c--ac----a
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93945  5 -     98465 a--------------------------c--ac----a
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7584  5 +     35169 a--------------------------c--ac----a
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51423 31 -     66298 acagacagacaggggggggggggggcac--ac----a
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3949  7 -     18639 A----------------------GACAG--A------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840145  1 -  28871421 g------------------------------------
i Pteropus_alecto.KB030862.1                             C 0 I 5
s Pteropus_vampyrus.KN525825.1                             3536656  1 -   4952924 g------------------------------------
i Pteropus_vampyrus.KN525825.1                           C 0 I 5
s Puma_concolor.QAVW01001104.1                            18098404  5 +  38429054 a--------------------------c--ac----a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26207  5 +     91421 A--------------------------G--AC----A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152699  5 -   7812017 A--------------------------G--AC----A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7074  5 +     72585 A--------------------------G--AC----A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52475  5 +     55069 G--------------------------C--AC----A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914042  7 +   3329780 a--------------------------cacac----a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              773  5 +      7119 A--------------------------G--AC----A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121381  5 + 195417433 a--------------------------g--ac----a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235623  5 -   7961872 A--------------------------G--AC----A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74054  5 -    116970 a--------------------------c--ac----a
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3286  5 +     27962 A--------------------------G--AC----A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3181  5 +      6077 A--------------------------G--AC----A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3271  5 +      5971 A--------------------------G--AC----A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3193  5 +      5932 A--------------------------G--AC----A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1535  5 -      4390 A--------------------------G--AC----A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390971  5 - 209938924 A--------------------------G--AC----A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3142  5 +      5979 A--------------------------G--AC----A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3905  5 -      4301 A--------------------------G--AC----A
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7142  5 +     16473 G--------------------------G--AC----A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108308  5 + 121099817 a--------------------------g--ac----a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29875  5 -     47369 A--------------------------G--AC----A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30261  5 -     79414 A--------------------------G--AC----A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26952  5 -     34454 A--------------------------G--AC----A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14355  5 -     22428 A--------------------------G--AC----A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29507  5 -     47109 A--------------------------G--AC----A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237565  5 +   5703754 A--------------------------G--AC----A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7155  5 +     21866 A--------------------------G--AC----A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115243  4 +    313613 ---------------------------C--AC----A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24526  5 +     27374 A--------------------------G--AC----A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28040  5 +     58920 A--------------------------G--AC----A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14536  5 -     45317 A--------------------------G--AC----A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22195  5 -     42441 A--------------------------G--AC----A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24873  5 -     29113 A--------------------------G--AC----A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27947  5 -     48123 A--------------------------G--AC----A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857578  5 -   1910179 A--------------------------T--AC----A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670614  5 +  18376816 a--------------------------a--ac----a
i Sorex_araneus.JH798187.1                               C 0 I 44
s Spermophilus_dauricus.KZ294078.1                         1867659  5 +   3870691 A--------------------------G--AC----C
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525              5939  3 -     97271 A--------------------------G--A------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124179  5 +    196729 A--------------------------C--AC----A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643074  5 +  69701581 A--------------------------C--AC----A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390464  5 +   1523678 A--------------------------G--AC----A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13413  5 +     22964 a--------------------------c--ac----a
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1984  5 +      5583 A--------------------------C--AT----T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190913  5 +    199430 A--------------------------C--AC----A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104884  5 -    539355 A--------------------------C--AC----A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6156  5 +      6850 A--------------------------C--AC----A
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6207 29 +     20590 a-a-acatacacacacacacacacacac--ac----a
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352420  5 - 186847797 a--------------------------g--ac----a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479445  5 -    610378 A--------------------------C--AC----A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20072  5 +     26378 A--------------------------G--AC----A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32750  5 -     78344 A--------------------------G--AC----A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19397  5 +     25722 A--------------------------G--AC----A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27702  5 -     62838 A--------------------------G--AC----A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27748  5 +     46913 A--------------------------G--AC----A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8555  5 -     28527 A--------------------------G--AC----A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29639  5 -     64340 A--------------------------G--AC----A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27676  5 -     63452 A--------------------------G--AC----A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9121  5 +     22490 A--------------------------G--AC----A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2547  5 -      6147 A--------------------------G--AC----A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9452  5 -     13050 A--------------------------G--AC----A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254692  5 -   6242583 A--------------------------G--AC----A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         716  5 +     19340 A--------------------------G--AC----A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172756  5 -    200418 G--------------------------C--AC----A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479716  1 -  10818551 ------------------------------------a
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833425  5 -   4065304 a--------------------------c--ac----a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7444  5 -     70247 a--------------------------c--ac----a
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360974  5 -  33153633 A--------------------------C--AC----A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2966  4 -     21056 ---------------------------C--AT----A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181121  3 +   5085361 a--------------------------g--a------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24519  4 -     30710 A--------------------------C--AC-----
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23426  4 -    147434 A--------------------------C--AC-----
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75600  5 +   5488506 a--------------------------c--ac----a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104261  3 -    112863 A--------------------------C--A------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173449  5 -    224448 A--------------------------G--AC----A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_17732         28154  3 -     86975 A--------------------------G--A------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       444  5 -       753 a--------------------------c--ac----a
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             382  5 +      1812 A--------------------------C--AC----A
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Microgale_talazaci.MicTal_scaffold_6613                    45220  5 +    145209 I
e Echinops_telfairi.JH980293.1                            62854174  5 - 111700974 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   19088  0 -     31044 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            12055  0 -     19938 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    48514 15 +     77746 I
e Rattus_norvegicus.chr16                                 37022029 15 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            36738 15 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         246131 15 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    2933 15 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    92041 27 -    140218 I
e Mus_spretus.CM004101.1                                  39496113 12 + 130317789 I
e Mus_pahari.LT608297.1                                   58216682 14 +  89631738 I
e Mus_musculus.chr8                                       41686817 12 + 129401213 I
e Mus_caroli.LT608237.1                                   35592432 12 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15961703  8 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17428487 52 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 49397 15 -    140813 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                222451 10 -    270270 I
e Ellobius_talpinus.LOJH01026522.1                           12245 15 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          30258 21 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238977  0 -    607251 C
e Cricetulus_griseus.LT883664.1                          213113980 146 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 43541 15 -     83289 I
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     24389 32 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4758 3 +     36723 C------AT
s Allactaga_bullata.AllBul_scaffold_20030                    17342 3 -     61208 c------ac
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47074 3 +     53615 C------AT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43035 3 +     44087 C------AT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15660 3 -     21945 C------AT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17343 3 +     32033 C------AT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71509 3 -     84148 C------AT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43748 3 -     78289 C------AT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43187 3 +     55831 C------AT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41637 3 -     64179 C------AC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23271 3 -     24835 C------AT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40262 3 +     45454 C------AC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45908 3 +     70886 C------AT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8084 3 +     30854 C------AC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32220 2 +     42133 C------A-
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584598 2 +   2318259 T------G-
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176412 2 -    412891 C------A-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49713 2 -     68529 C------A-
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     463 3 +     17741 C------AT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1088 3 -     15923 C------AT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1363 3 -     16391 C------AT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                923 3 -     17186 C------AT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15307 7 -     32367 CA--TATGC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18843 1 -     45910 C--------
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4684 2 -     15198 C------T-
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273971 3 +  21539123 C------AT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10138 3 +     48076 C------AT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5275 3 -     28759 C------AT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32828 3 +     44353 C------AT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48198 3 -     71267 C------AT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22257 3 -     33135 C------AT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5489 3 +     11645 c------ac
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5499 3 -     19611 c------ac
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956507 2 -  23207421 c------a-
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3716 2 -      4711 c------a-
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85607 2 +    124022 C------G-
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21139 2 +    288883 C------G-
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355525 2 +  48749331 C------G-
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754093 2 +   1948126 C------G-
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544232 2 -  45695690 C------G-
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529257 2 -   4408762 G------G-
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7145 3 +     28062 C------AT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42439 3 -     91139 C------AT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19965 3 +     95584 C------AT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19878 3 +    119600 C------AT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9445 3 +     18648 T------AT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8984 3 -     13885 C------AT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1050 3 -      8861 C------AT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453443 3 + 189096842 C------AT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                965 3 +      8664 C------AT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630271 2 +  17673402 T------G-
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664557 2 +   7040546 T------G-
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208217 2 +   1652518 T------G-
i Camelus_ferus.KB017975.1                               C 0 C 0
s Capra_aegagrus.CM003241.1                               27408328 2 -  46296322 C------G-
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590601 2 +  44709034 C------G-
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    783 3 -      1880 a------ac
i Capromys_pilorides.CapPil_scaffold_652123              C 0 I 48
s Carollia_perspicillata.CarPer_scaffold_668536                630 2 -      1021 C------A-
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26944 3 -     39886 C------AC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78812 1 -    217609 C--------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995663 3 +  23392119 a------at
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999105 3 +  23407841 a------at
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62186 3 -     66877 A------AT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4363 3 -     12580 T------AT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42421 3 +     53515 T------AT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370352 3 -  26074798 C------AT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7241 3 -     34880 C------AT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66336 3 -     89041 C------AT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1466 3 -      5494 c------ac
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491445 2 -  27778364 c------a-
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18278 2 +     27315 C------A-
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140257 3 -   4669795 c------at
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       43999 3 +     47900 C------AT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43824 3 -     44860 C------AT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43812 3 -    148725 C------AT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25989 3 -     40656 C------AT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5955 3 +     20796 C------AT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11072 3 -     17524 C------AG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26794 3 -     34525 C------AT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10575 3 -     25376 C------AT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363171 3 -  39242232 C------AT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268887 3 +  21565898 C------AT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31261 3 -     45857 C------AT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26160 3 -     32606 C------AT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2319 3 +      8499 C------AT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24717 3 +     70610 C------AT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21686 3 +     36323 C------AT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12055 1 -     19938 --------C
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29868 2 -     33796 C------A-
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4385 2 -     15404 C------A-
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8238 3 -     32913 C------AT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18651 3 -     40346 C------AT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18906 3 +    216457 C------AT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18699 3 +     39636 C------AT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238115 3 -   2543920 c------ac
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3293 3 +      5346 C------AT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41776 3 -    112038 C------AT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7347 3 +     34062 C------AT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342577 3 +  18827391 C------AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9124 3 -     44032 C------AT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303901 3 - 135778131 c------at
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14036 3 +     15858 C------AC
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605612 3 -    839153 C------ac
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408330 3 -   2368649 c------at
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378206 3 - 200372422 C------AT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1755 3 -     84244 C------AT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2041 2 -      8242 C------A-
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3599 2 +     87169 c------a-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644252 3 -   1526836 C------AG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17572 3 +     50838 a------ac
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 48
s Cuniculus_paca.CunPac_flattened_line_7025                   3550 3 +     36344 a------at
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27348 3 +     75252 A------AT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109406 3 -   2246927 C------AC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291810 3 +  12879189 C------AC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625039 2 -  35494412 C------A-
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864433 2 -  20541912 C------A-
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663734 2 -   1390856 c------a-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138522 2 -    198055 C------A-
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98105 3 -    115145 a------ac
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18949733 3 -  37912305 c------aa
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4668 3 -     10735 C------AG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9598 3 +     14636 a------at
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5502 2 +     19438 c------a-
i Eidolon_helvum.AWHC01266696.1                          C 0 I 7
s Elephantulus_edwardii.JH947257.1                         9107796 3 -  10337057 T------AT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578122 2 +  14770903 c------a-
i Eptesicus_fuscus.JH977646.1                            C 0 I 20
s Equus_asinus.JREZ01000139.1                              3040602 2 -   4378816 c------a-
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374526 2 +  39960074 c------a-
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411312 2 -    498745 c------a-
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665359 2 +   7059049 G------A-
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262104 3 +  21539334 C------AT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64385 2 -    133382 C------A-
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4598 2 +      7672 C------A-
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14007 3 -     24895 C------AC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41716 3 -     70999 C------AC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85678 3 +    112731 C------AC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42247 3 +     68309 C------AC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52573 3 -     65740 C------AC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23202 3 -     75513 C------AC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47399 3 -     97555 C------AC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4124 3 +     30972 C------AC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41844 3 -     52037 C------AC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58246 3 -    111500 C------AC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Galago_moholi.ctg3793                                     124261 1 -    137831 C--------
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7806 1 +     22493 C--------
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19873 3 -     32986 C------AC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 408 3 -     28519 C------AT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90677 2 -     95226 c------a-
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Gorilla_beringei.k141_3358147                               5060 3 -      8343 C------AT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254072 3 - 186649187 c------at
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13932 3 -     40692 C------AC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35334 3 +     49394 C------AC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60202 3 -     66874 C------AC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9076 3 -     42923 C------AC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16076 3 -     53142 C------AC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30028 2 -    327341 G------A-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8435 2 +     48891 C------G-
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6331 1 +      6687 C--------
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6874 2 -     36432 C------A-
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553395 2 -   1711038 c------a-
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                308 2 -      2730 c------a-
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142080 3 -    630532 C------AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68941 2 +     83186 C------A-
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71070 3 +    143317 a------at
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5115 3 +     12352 C------AT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12299 3 +     55766 C------AT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051897 3 + 191637585 C------AT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800775 3 +  11177569 C------AT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3721 3 -    135385 A------AT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386087 8 +   7955117 c-cacagac
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Indri_indri.k141_2415743                                    1636 3 +     11955 c------ac
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2848 2 -     16823 C------A-
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238853 3 +   9596543 c------ac
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65098 2 -     97402 C------A-
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42515 3 +    110728 C------AT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    31428 2 -     49555 c------a-
i Lasiurus_borealis.LasBor_scaffold_26245                C 0 I 96
s Lemur_catta.scaffold_24                                 14758725 3 +  30322482 C------AC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3428 3 -     13097 C------AT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3182 3 +      5940 C------AT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3012 3 -      5717 C------AT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9388 3 -     11567 C------AT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10769 3 -     12945 C------GT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8241 1 +     29618 --------C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8237 1 +     31569 --------C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8248 1 +     24756 --------C
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8247 1 +     16388 --------C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17089 1 +     24238 C--------
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             334384 2 +    662738 C------A-
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333142 3 -   1826925 C------AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9842 1 +     19643 C--------
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043505 1 -   6120653 c--------
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080258 3 +  43346337 C------AT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Macaca_arctoides.k141_1757516                              44526 3 -     61512 C------AT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372188 3 -  60120075 C------AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24451 3 +     30207 C------AT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21554 3 -     24934 C------AT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24404 3 +     30527 C------AT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35580 3 -     50087 C------AT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45324 3 +     51645 C------AT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414526 3 - 187317192 c------at
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398757 3 +  25927173 c------at
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47929 3 -     62418 C------AT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  467 3 +     14901 C------AT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44401 3 +     59329 C------AT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270309 3 +    668171 C------AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  585 3 +      1732 C------AT
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2107 3 +     17132 C------AT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321606 3 +  24302211 C------AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356438 3 -    752769 C------AT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672814 2 -    737560 c------a-
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220102 2 +    317179 c------a-
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500307 8 +  40650429 c-cacagac
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149656 2 +    207569 c------a-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80683 2 +     93471 C------A-
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9554 3 +     17804 T------AT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10056 3 -     12984 T------AT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18370 3 -     26561 T------AT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184378 2 +    200668 C------A-
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362501 2 -   8254450 a------a-
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41408 2 -     48117 A------A-
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21614 3 -     27822 C------AT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     51644 3 -     62432 C------AC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352782 2 +    437263 C------A-
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178543 2 +    366855 T------A-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24796 2 -     82753 C------G-
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17780 2 -     63510 G------A-
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38468 2 +     47283 C------A-
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Myotis_brandtii.KE162005.1                               9792754 2 +  10118263 c------a-
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386884 2 +   6019432 c------a-
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382711 2 +   4330536 c------a-
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1523 2 +     18357 c------a-
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              118999 3 +    130748 C------AC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945478 3 +   3037898 c------ac
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28255 3 +     34575 C------AT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226952 2 -   7148211 C------A-
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127492 2 -    149072 C------A-
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53008 3 -    132029 C------AT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9103 3 -     16345 C------AT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14988 3 +     22201 C------AT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413209 3 -  22158432 C------AT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25386 3 -     54323 C------AT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93635877 1 + 196305487 A--------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2631 1 -      3937 A--------
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564136 1 - 199412804 A--------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550454 1 -   3988456 C--------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11054353 3 -  11899542 a------at
i Octodon_degus.JH651603.1                               C 0 I 42
s Odocoileus_virginianus.KZ100018.1                         435561 2 -    630418 c------a-
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13561 2 +    150152 c------a-
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8096234 2 +  10937097 C------A-
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12908 3 -     14239 C------AT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102926 1 - 174332312 C--------
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39422 1 -     51505 C--------
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352425 1 +   1103335 c--------
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403555 2 -  44047080 C------G-
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4074 2 +     17875 C------G-
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472101 3 - 189151597 c------at
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23767 2 -    230217 C------A-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461093 2 -  18783137 c------a-
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971752 2 +   8748460 c------a-
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614993 2 +   2937107 T------G-
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242439 3 - 183742232 c------at
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8901 3 +     21308 C------AT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291475 3 -  20919399 C------AT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21549 3 -     27687 C------AT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14695 3 +     16796 C------AT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21506 3 -     23640 C------AT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14364 8 +     78924 GACCCACA-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25630 1 +     31479 C--------
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            17999 1 -     24908 C--------
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1064 3 +      9367 C------AG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12078 2 -     15039 C------A-
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1713 3 +     55023 C------AT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1263 3 -     89929 C------AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1852 3 +     40849 C------AT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253516 3 +  14605196 c------at
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3056 2 +     22231 c------a-
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 11
s Pithecia_albicans.k141_1239476                             64152 3 +    207309 C------AT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5245 3 -     25401 C------AT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30988 3 +     58159 C------AT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31264 3 +     63561 C------AT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31024 3 +     51148 C------AT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555994 3 -   4542175 C------AT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31008 3 +     51125 C------AT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4168 2 -      8168 C------A-
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7406 3 +     39866 C------AT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2490 3 -      9282 C------AT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41894 3 -     87950 C------AT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42288 3 -     88961 C------AT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6986 3 -     39403 C------AT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41937 3 +     87928 C------AT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6983 3 -     60166 C------AT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13920 3 -     67232 C------AT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41836 3 -     90634 C------AT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43303 3 +     89403 C------AT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177225 3 - 189387572 c------at
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192042 3 -   9816681 C------AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26838 3 +     69807 C------AT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44024 3 -     80239 C------AT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2710 1 +      3019 C--------
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981880 3 +   4620579 c------ac
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565385 3 -   2598838 c------ac
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3023 3 -      7103 c------ac
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3620 3 -     11706 c------ac
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7358 3 -     30655 c------ac
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33671 3 +     46564 c------ac
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93950 3 -     98465 c------ac
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7589 3 +     35169 c------ac
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51454 2 -     66298 c------a-
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26212 3 +     91421 C------AT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152704 3 -   7812017 C------AT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7079 3 +     72585 C------AT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52480 2 +     55069 T------A-
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914049 2 +   3329780 c------a-
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              778 3 +      7119 C------AT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121386 3 + 195417433 c------at
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235628 3 -   7961872 C------AT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74059 2 -    116970 c------a-
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 7
s Saguinus_bicolor.k141_1429097                               3291 3 +     27962 C------AT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3186 3 +      6077 C------AT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3276 3 +      5971 C------AT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3198 3 +      5932 C------AT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1540 3 -      4390 C------AT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390976 3 - 209938924 C------AT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3147 3 +      5979 C------AT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3910 3 -      4301 C------AT
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7147 2 +     16473 C------G-
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108313 3 + 121099817 c------at
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29880 3 -     47369 C------AT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30266 3 -     79414 C------AT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26957 3 -     34454 C------AT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14360 3 -     22428 C------AT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29512 3 -     47109 C------AT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237570 3 +   5703754 C------AT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7160 3 +     21866 C------AT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115247 2 +    313613 C------A-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24531 3 +     27374 C------AT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28045 3 +     58920 C------AT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14541 3 -     45317 C------AT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22200 3 -     42441 C------AT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24878 3 -     29113 C------AT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27952 3 -     48123 C------AT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857583 2 -   1910179 G------A-
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670663 2 +  18376816 a------a-
i Sorex_araneus.JH798187.1                               I 44 C 0
s Spermophilus_dauricus.KZ294078.1                         1867667 8 +   3870691 c-cacagac
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124184 2 +    196729 G------A-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643079 1 +  69701581 C--------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390469 3 +   1523678 C------AT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13418 2 +     22964 c------a-
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1989 3 +      5583 C------AC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190918 2 +    199430 C------A-
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104889 2 -    539355 C------A-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6161 3 +      6850 C------AC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6236 3 +     20590 c------ac
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352425 3 - 186847797 c------at
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19088 1 -     31044 --------C
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479450 2 -    610378 C------A-
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20077 3 +     26378 C------AT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32755 3 -     78344 C------AT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19402 3 +     25722 C------AT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27707 3 -     62838 C------AT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27753 3 +     46913 C------AT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8560 3 -     28527 C------AT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29644 3 -     64340 C------AT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27681 3 -     63452 C------AT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9126 3 +     22490 C------AT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2552 3 -      6147 C------AT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9457 3 -     13050 C------AT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254697 3 -   6242583 C------AT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         721 3 +     19340 C------AT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172761 2 -    200418 C------A-
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479717 3 -  10818551 c------ag
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833430 3 -   4065304 c------ac
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7449 3 -     70247 c------ac
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360979 2 -  33153633 C------A-
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2970 2 -     21056 C------A-
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Varecia_rubra.k141_787544                                  24523 2 -     30710 -------AC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23430 2 -    147434 -------AC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75605 2 +   5488506 c------a-
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173457 7 -    224448 C-CTC-CCC
i Xerus_inauris.XerIna_scaffold_2302                     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       449 3 -       753 c------ac
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             387 2 +      1812 C------A-
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Crocidura_indochinensis.CroInd_scaffold_77846               6707 0 +     12657 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Microgale_talazaci.MicTal_scaffold_6613                    45220 5 +    145209 I
e Echinops_telfairi.JH980293.1                            62854174 5 - 111700974 I
e Zalophus_californianus.ZalCal_flattened_line_17732         28157 0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                104264 0 -    112863 C
e Ursus_maritimus.KK499267.1                                181124 0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              5942 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          3956 0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        38542 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1450962 0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                197495 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11468365 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14354385 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         7770 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             25457 0 -     74585 C
e Lycaon_pictus.CM007581.1                                41613902 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        812763 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24915353 0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45106328 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41614747 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          221612 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     8269 0 -     23171 C
e CanFam4.chr16                                           42504633 0 +  60362399 C
e Ailurus_fulgens.LNAC01001112.1                            214922 0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20414611 0 +  29979442 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    48514 15 +     77746 I
e Rattus_norvegicus.chr16                                 37022029 15 -  90668790 I
e Puma_concolor.QAVW01001104.1                            18098409 0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3536657 5 -   4952924 I
e Pteropus_alecto.KB030862.1                               5840146 5 -  28871421 I
e Psammomys_obesus.NESX01036366.1                            36738 15 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         246131 15 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    2933 15 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    92041 27 -    140218 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             82573 0 -     86153 C
e Mus_spretus.CM004101.1                                  39496113 12 + 130317789 I
e Mus_pahari.LT608297.1                                   58216682 14 +  89631738 I
e Mus_musculus.chr8                                       41686817 12 + 129401213 I
e Mus_caroli.LT608237.1                                   35592432 12 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15961703 8 +  27267610 I
e Microcebus_murinus.CM007674.1                           74983851 0 +  93316391 C
e Mesocricetus_auratus.KB708134.1                         17428487 52 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 49397 15 -    140813 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                222451 10 -    270270 I
e Graphiurus_murinus.GraMur_scaffold_10447                    1235 0 -     78134 C
e Glis_glis.GliGli_scaffold_33859                            33744 0 -     36801 C
e Felis_nigripes.FelNig_flattened_line_31944                 26944 0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185115843 0 - 205367284 C
e Ellobius_talpinus.LOJH01026522.1                           12245 15 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          30258 21 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       238977 0 -    607251 C
e Cricetulus_griseus.LT883664.1                          213113980 146 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 43541 15 -     83289 I
e Condylura_cristata.JH655891.1                           35806433 134 +  53390261 I
e Carlito_syrichta.NW_007259797.1                           269536 0 +    496798 C
e Aotus_nancymaae.KZ198451.1                                671588 0 +   5030052 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     24389 32 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           812152 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4761  6 +     36723 ACA----------------C------------------A----C
s Acinonyx_jubatus.LLWD01001279.1                           812152  5 +   1699592 -ca----------------c------------------a----c
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414611  5 +  29979442 -ca----------------c------------------a----c
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214922  5 +    347723 -ca----------------c------------------a----c
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17345  6 -     61208 aca----------------c------------------a----c
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 36
s Allenopithecus_nigroviridis.k141_3755588                   47077  6 +     53615 ACA----------------C------------------A----C
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43038  6 +     44087 ACA----------------C------------------A----C
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15663  6 -     21945 ACA----------------C------------------A----C
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17346  6 +     32033 ACA----------------C------------------A----C
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71512  6 -     84148 ACA----------------C------------------A----C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43751  6 -     78289 ACA----------------C------------------A----C
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43190  6 +     55831 ACA----------------C------------------A----C
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41640  6 -     64179 ACA----------------C------------------A----C
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23274  6 -     24835 ACA----------------C------------------A----C
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40265  6 +     45454 ACA----------------C------------------A----C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45911  6 +     70886 ACA----------------C------------------A----C
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8087  6 +     30854 ACA----------------C------------------A----C
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32222  5 +     42133 -CA----------------C------------------A----C
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584600  5 +   2318259 -TA----------------C------------------A----C
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176414  2 -    412891 -CA-----------------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49715  5 -     68529 -TG----------------C------------------A----C
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     466  6 +     17741 ACA----------------C------------------A----C
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1091  6 -     15923 ACA----------------C------------------A----C
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1366  6 -     16391 ACA----------------C------------------A----C
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                926  6 -     17186 ACA----------------C------------------A----C
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15314  6 -     32367 GTA----------------C------------------A----C
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4686  2 -     15198 -CA-----------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273974  6 +  21539123 ACA----------------C------------------A----C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10141  6 +     48076 ACA----------------C------------------A----C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5278  6 -     28759 ACA----------------C------------------A----C
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32831  6 +     44353 ACA----------------C------------------A----C
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48201  6 -     71267 ACA----------------C------------------A----C
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22260  6 -     33135 ACA----------------C------------------A----G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5492  6 +     11645 aca----------------c------------------a----c
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5502  4 -     19611 --a----------------c------------------a----c
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956509  5 -  23207421 -ta----------------c------------------a----c
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3718  5 -      4711 -ta----------------c------------------a----c
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85609  5 +    124022 -TA----------------C------------------A----C
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21141  5 +    288883 -TA----------------C------------------A----C
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355527  5 +  48749331 -TA----------------C------------------A----C
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754095  5 +   1948126 -TA----------------C------------------A----C
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544234  5 -  45695690 -TA----------------C------------------A----C
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529259  5 -   4408762 -CA----------------C------------------A----C
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7148  6 +     28062 ACA----------------C------------------A----C
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42442  6 -     91139 ACA----------------C------------------A----C
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19968  6 +     95584 ACA----------------C------------------A----C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19881  6 +    119600 ACA----------------C------------------A----C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9448  6 +     18648 ACA----------------C------------------A----C
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8987  6 -     13885 ACA----------------C------------------A----C
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1053  6 -      8861 GCA----------------C------------------A----C
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453446  6 + 189096842 ACA----------------C------------------A----C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                968  6 +      8664 ACA----------------C------------------A----C
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630273  5 +  17673402 -TA----------------C------------------A----C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664559  5 +   7040546 -TA----------------C------------------A----C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208219  5 +   1652518 -TA----------------C------------------A----C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504633  5 +  60362399 -CA----------------C------------------A----C
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8269  5 -     23171 -CA----------------C------------------A----C
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221612  5 +   9314153 -ca----------------c------------------a----c
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614747  5 +  59632846 -ca----------------c------------------a----c
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106328  5 -  63665305 -ca----------------c------------------a----c
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408330  5 -  46296322 -TA----------------C------------------A----C
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590603  5 +  44709034 -TA----------------C------------------A----C
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    834  8 -      1880 aca----------------t------------------a--cac
i Capromys_pilorides.CapPil_scaffold_652123              I 48 I 5
s Carollia_perspicillata.CarPer_scaffold_668536                632  2 -      1021 -CA-----------------------------------------
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26947  6 -     39886 ACA----------------C------------------A----C
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78813  5 -    217609 -TA----------------C------------------A----C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995666  6 +  23392119 aaa----------------t------------------a----c
i Cavia_aperea.AVPZ01000300.1                            C 0 I 6
s Cavia_porcellus.DS562891.1                               4999108  6 +  23407841 aaa----------------t------------------a----c
i Cavia_porcellus.DS562891.1                             C 0 I 6
s Cavia_tschudii.CavTsc_scaffold_23560                       62189  6 -     66877 AAA----------------T------------------A----C
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 6
s Cebuella_niveiventris.k141_592277                           4366  6 -     12580 ACA----------------C------------------A----C
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42424  6 +     53515 ACA----------------C------------------A----C
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370355  6 -  26074798 ACA----------------C------------------G----C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7244  6 -     34880 ACA----------------C------------------G----C
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66339  6 -     89041 ACA----------------C------------------G----C
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1469  6 -      5494 aca----------------c------------------a----c
i Cephalopachus_bancanus.k141_1689090                    C 0 I 18
s Ceratotherium_simum.JH767749.1                          15491447  5 -  27778364 -ca----------------c------------------a----c
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18280  5 +     27315 -CA----------------C------------------A----C
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140260  6 -   4669795 aca----------------c------------------a----c
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44002  6 +     47900 ACA----------------C------------------A----C
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43827  6 -     44860 ACA----------------C------------------A----C
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43815  6 -    148725 ACA----------------C------------------A----C
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25992  6 -     40656 ACA----------------C------------------A----C
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5958  6 +     20796 ACA----------------C------------------A----C
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11075  6 -     17524 ACA----------------C------------------A----C
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26797  6 -     34525 ACA----------------C------------------A----C
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10578  6 -     25376 ACA----------------C------------------A----C
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363174  6 -  39242232 ACA----------------C------------------A----C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268890  6 +  21565898 ACA----------------C------------------A----C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31264  6 -     45857 ACA----------------C------------------A----C
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26163  6 -     32606 ACA----------------C------------------A----C
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2322  6 +      8499 ACA----------------C------------------A----C
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24720  6 +     70610 ACA----------------C------------------A----C
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21689  6 +     36323 ACA----------------C------------------A----C
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12056  6 -     19938 AGA----------------C------------------A----T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29870  3 -     33796 -------------------C------------------A----C
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4387  3 -     15404 -------------------C------------------A----C
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8241  6 -     32913 ACA----------------C------------------A----C
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18654  6 -     40346 ACA----------------C------------------A----C
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18909  6 +    216457 ACA----------------C------------------A----C
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18702  6 +     39636 ACA----------------C------------------A----C
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238118  6 -   2543920 aaa----------------c------------------a----c
i Chinchilla_lanigera.JH722012.1                         C 0 I 5
s Chiropotes_albinasus.k141_1946120                           3296  6 +      5346 ACA----------------C------------------A----C
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41779  6 -    112038 ACA----------------C------------------A----C
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7350  6 +     34062 ACA----------------C------------------A----C
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342580  6 +  18827391 ACA----------------C------------------A----C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9127  6 -     44032 ACA----------------C------------------A----C
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303904  6 - 135778131 aca----------------c------------------a----c
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14039  8 +     15858 AGA----------------C----------------TCA----C
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605615  8 -    839153 aga----------------c--tc--------------a----c
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408333  6 -   2368649 aca----------------c------------------a----c
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378209  6 - 200372422 ACA----------------C------------------A----C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1758  6 -     84244 ACA----------------C------------------A----C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2043  5 -      8242 -CA----------------C------------------A----C
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6707  4 +     12657 --T----------------C------------------A----C
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3601  5 +     87169 -ca----------------c------------------a----c
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644255  6 -   1526836 GAA----------------C------------------C----C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17623  6 +     50838 aca----------------c------------------a----c
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 48 I 5
s Cuniculus_paca.CunPac_flattened_line_7025                   3553  6 +     36344 aga----------------c------------------a----c
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 5
s Dasyprocta_punctata.DasPun_flattened_line_15900            27351  6 +     75252 ACA----------------C------------------A----C
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 5
s Dasypus_novemcinctus.JH564415.1                          2109409  6 -   2246927 AGA----------------C------------------A----G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291813  6 +  12879189 ACA----------------C------------------A----C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625041  5 -  35494412 -TA----------------C------------------G----C
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864435  2 -  20541912 -CA-----------------------------------------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663736  5 -   1390856 -ca----------------c------------------a----c
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138524  5 -    198055 -CA----------------C------------------A----C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98108  6 -    115145 aca----------------c------------------a----c
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 5
s Dipodomys_ordii.KN672350.1                              18949736  6 -  37912305 aca----------------c------------------a----c
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4671  6 -     10735 ACA----------------C------------------A----C
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9601  6 +     14636 aga----------------t------------------a----c
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 5
s Eidolon_helvum.AWHC01266696.1                               5511  4 +     19438 --a----------------c------------------a----c
i Eidolon_helvum.AWHC01266696.1                          I 7 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238977  2 -    607251 --------------------------------------A----C
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107799  5 -  10337057 GC-----------------T------------------A----C
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915353  5 +  41312741 -ca----------------c------------------a----c
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578144  5 +  14770903 -ca----------------c------------------a----c
i Eptesicus_fuscus.JH977646.1                            I 20 C 0
s Equus_asinus.JREZ01000139.1                              3040604  5 -   4378816 -ca----------------c------------------a----c
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374528 19 +  39960074 -cacacacacacaca--cac------------------a----c
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411314 21 -    498745 -cacacacacacacatacac------------------a----c
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665361  5 +   7059049 -CA----------------C------------------A----T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262107  6 +  21539334 ACA----------------C------------------A----C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64387  5 -    133382 -TA----------------C------------------A----C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4600  5 +      7672 -TA----------------C------------------A----C
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14010  6 -     24895 AGA----------------G------------------A----C
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41719  6 -     70999 ACA----------------G------------------A----C
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85681  6 +    112731 ACA----------------G------------------A----C
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42250  6 +     68309 ACA----------------G------------------A----C
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52576  6 -     65740 ACA----------------G------------------A----C
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23205  6 -     75513 ACA----------------G------------------A----C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47402  6 -     97555 ACA----------------G------------------A----C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4127  6 +     30972 ACA----------------G------------------A----C
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41847  6 -     52037 ACA----------------G------------------A----C
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58249  6 -    111500 ACA----------------G------------------A----C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246057  9 - 206538554 -ca----------------ca--cag------------a----c
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115843  9 - 205367284 -ca----------------ca--cag------------a----c
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26944  5 -     30238 -CA----------------C------------------A----C
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galagoides_demidoff.k141_561628                            19876  6 -     32986 ACA----------------C------------------A----C
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 411  6 -     28519 AGA----------------C------------------A----C
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90679  5 -     95226 -ta----------------c------------------a----c
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33744  6 -     36801 ACA----------------C------------------A----C
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5063  5 -      8343 ACA----------------C------------------A-----
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254075  6 - 186649187 aca----------------c------------------a----c
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1235  6 -     78134 ACA----------------C------------------A----C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13935  6 -     40692 ACA----------------G------------------A----C
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35337  6 +     49394 ACA----------------G------------------A----C
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60205  6 -     66874 ACA----------------G------------------A----C
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9079  6 -     42923 ACA----------------G------------------A----C
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16079  6 -     53142 ACA----------------G------------------A----C
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30030  5 -    327341 -CA----------------C------------------A----C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8437  5 +     48891 -TA----------------C------------------A----C
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6332  1 +      6687 --------------------------------------A-----
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6876  5 -     36432 -TA----------------C------------------A----C
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553397  5 -   1711038 -ca----------------c------------------a----c
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                310  5 -      2730 -ca----------------c------------------a----c
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142083  6 -    630532 ACA----------------C------------------A----C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68943  5 +     83186 -CA----------------C------------------A----C
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71073 24 +    143317 aga----------------cagacagacagacagacaca----c
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 5
s Hylobates_agilis.k141_1155965                               5118  6 +     12352 ACA----------------C------------------A----C
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12302  6 +     55766 ACA----------------C------------------A----C
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051900  6 + 191637585 ACA----------------C------------------A----C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800778  6 +  11177569 ACA----------------C------------------A----C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3724  6 -    135385 AGA----------------C------------------A----C
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 5
s Ictidomys_tridecemlineatus.JH393364.1                     386095  6 +   7955117 aca----------------c------------------a----c
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1639  6 +     11955 aca----------------c------------------a----c
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2850  5 -     16823 -TA----------------C------------------G----C
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238856  6 +   9596543 aca----------------c------------------N----N
i Jaculus_jaculus.JH725527.1                             C 0 I 36
s Kogia_breviceps.KogBre_flattened_line_3970                 65100  5 -     97402 -TA----------------C------------------A----C
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42518  6 +    110728 ACA----------------C------------------A----C
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62173  5 -     65777 -ca----------------c------------------a----c
i Lasiurus_borealis.LasBor_scaffold_16567                I 47 C 0
s Lemur_catta.scaffold_24                                 14758728  6 +  30322482 ACA----------------G------------------A----C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3431  6 -     13097 ACA----------------C------------------A----C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3185  6 +      5940 ACA----------------C------------------A----C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3015  6 -      5717 ACA----------------C------------------A----C
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9391  6 -     11567 ACA----------------C------------------A----C
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10772  6 -     12945 ACA----------------C------------------A----C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8242  6 +     29618 ACA----------------C------------------A----C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8238  6 +     31569 ACA----------------C------------------A----C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8249  6 +     24756 ACA----------------C------------------A----C
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8248  6 +     16388 ACA----------------C------------------A----C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812763  5 -   3914936 -ca----------------c------------------a----c
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17090  2 +     24238 --------------------------------------A----C
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 1
s Lipotes_vexillifer.KE559953.1                             334386  5 +    662738 -TA----------------C------------------G----C
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333145  6 -   1826925 ACA----------------C------------------A----C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39080261  6 +  43346337 ACC----------------C------------------G----C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613902  5 +  59628241 -ca----------------c------------------a----c
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44529  6 -     61512 ACA----------------C------------------A----C
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372191  6 -  60120075 ACA----------------C------------------A----C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24454  6 +     30207 ACA----------------C------------------A----C
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21557  6 -     24934 ACA----------------C------------------A----C
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24407  6 +     30527 ACA----------------C------------------A----C
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35583  6 -     50087 ACA----------------C------------------A----C
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45327  6 +     51645 ACA----------------C------------------A----C
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414529  6 - 187317192 aca----------------c------------------a----c
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398760  6 +  25927173 aca----------------c------------------a----c
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47932  6 -     62418 ACA----------------C------------------A----C
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  470  6 +     14901 ACA----------------C------------------A----C
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44404  6 +     59329 ACA----------------C------------------A----C
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270312  6 +    668171 ACA----------------C------------------A----C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  588  6 +      1732 ACA----------------C------------------A----C
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2110  6 +     17132 ACA----------------C------------------A----C
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222461  5 -    270270 -CA----------------C------------------A----C
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 10 C 0
s Mandrillus_leucophaeus.scaffold280                        321609  6 +  24302211 ACA----------------C------------------A----C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356441  6 -    752769 ACA----------------C------------------A----C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672816  5 -    737560 -ca----------------c------------------a----c
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220104  5 +    317179 -ca----------------c------------------a----c
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500315  6 +  40650429 aca----------------c------------------a----c
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149658  5 +    207569 -ca----------------c------------------a----c
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25457  5 -     74585 -CA----------------C------------------A----C
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80685  5 +     93471 -TA----------------C------------------A----T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9557  6 +     17804 ACA----------------C------------------A----C
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10059  6 -     12984 ACA----------------C------------------A----C
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18373  6 -     26561 ACA----------------C------------------A----C
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983851  5 +  93316391 -ca----------------c------------------a----c
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184380  2 +    200668 -CA-----------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362503  5 -   8254450 -ca----------------c------------------a----c
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41410  5 -     48117 -CA----------------C------------------A----C
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21617  6 -     27822 ACA----------------C------------------A----C
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7770  5 +     27589 -CA----------------C------------------A----C
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51647  6 -     62432 ACA----------------C------------------A----C
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352784  5 +    437263 -TA----------------C------------------G----C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178545  5 +    366855 -TA----------------C------------------A----C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24798  5 -     82753 -TG----------------C------------------A----C
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17782  5 -     63510 -CA----------------C------------------A----C
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38470  5 +     47283 -CA----------------C------------------A----C
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82573  6 -     86153 ACA----------------C------------------A----C
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354385  5 +  14710649 -ca----------------c------------------a----c
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     62416  6 +     67721 aca----------------c------------------a----c
i Myocastor_coypus.MyoCoy_scaffold_15261                 N 0 I 5
s Myotis_brandtii.KE162005.1                               9792756  5 +  10118263 -ca----------------c------------------a----c
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386886  5 +   6019432 -ca----------------c------------------a----c
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382713  5 +   4330536 -ca----------------c------------------a----c
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1525  5 +     18357 -ca----------------c------------------a----c
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119002  6 +    130748 AGA----------------C------------------A----C
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945481  6 +   3037898 aca----------------c------------------a----c
i Nannospalax_galili.KL204047.1                          C 0 I 79
s Nasalis_larvatus.k141_1350636                              28258  6 +     34575 ACA----------------C------------------A----C
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468365  5 -  31847680 -ca----------------c------------------a----c
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226954  5 -   7148211 -TA----------------C------------------G----C
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127494  5 -    149072 -CA----------------C------------------A----T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53011  6 -    132029 ACA----------------C------------------A----C
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9106  6 -     16345 ACA----------------C------------------A----C
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14991  6 +     22201 ACA----------------C------------------A----C
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413212  6 -  22158432 ACA----------------C------------------A----C
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25389  6 -     54323 ACA----------------C------------------A----C
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197495  5 +   9404916 -ca----------------c------------------a----c
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2550455  2 -   3988456 --------------------------------------A----C
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Odobenus_rosmarus.KB229312.1                             1450962  5 +   2017862 -ca----------------c------------------a----c
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435563  5 -    630418 -ta----------------c------------------a----c
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13563  5 +    150152 -ta----------------c------------------a----c
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8096236  5 +  10937097 -TA----------------T------------------G----C
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12911  6 -     14239 ACA----------------C------------------G----C
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102927  2 - 174332312 --------------------------------------A----C
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                        38542  5 +    559221 -ca----------------c------------------a----c
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26403557  5 -  44047080 -TA----------------C------------------A----C
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4076  5 +     17875 -TA----------------C------------------A----C
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472104  6 - 189151597 aca----------------c------------------a----c
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23769  5 -    230217 -CA----------------C------------------A----C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461095  5 -  18783137 -ca----------------c------------------a----c
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971754  5 +   8748460 -ca----------------c------------------a----c
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1614995  5 +   2937107 -TA----------------C------------------A----C
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242442  6 - 183742232 aca----------------c------------------a----c
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8904  6 +     21308 ACA----------------C------------------A----C
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291478  6 -  20919399 ACA----------------C------------------A----C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21552  6 -     27687 ACA----------------C------------------A----C
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14698  6 +     16796 ACA----------------C------------------A----C
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21509  6 -     23640 ACA----------------C------------------A----C
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14372  5 +     78924 -CA----------------C------------------A----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1067  6 +      9367 ATA----------------C------------------T----C
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12080  5 -     15039 -TA----------------C------------------G----C
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1716  6 +     55023 ACA----------------C------------------A----C
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1266  6 -     89929 ACA----------------C------------------A----C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1855  6 +     40849 ACA----------------C------------------A----C
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253519  6 +  14605196 aca----------------c------------------a----c
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             64155  6 +    207309 ACA----------------C------------------A----C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5248  6 -     25401 ACA----------------C------------------A----C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30991  6 +     58159 ACA----------------C------------------A----C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31267  6 +     63561 ACA----------------C------------------A----C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31027  6 +     51148 ACA----------------C------------------A----C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              555997  6 -   4542175 ACA----------------C------------------A----C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31011  6 +     51125 ACA----------------C------------------A----C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4170  5 -      8168 -TA----------------C------------------A----C
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7409  6 +     39866 ACA----------------C------------------A----C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2493  6 -      9282 ACA----------------C------------------A----C
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41897  6 -     87950 ACA----------------C------------------A----C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42291  6 -     88961 ACA----------------C------------------A----C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6989  6 -     39403 ACA----------------C------------------A----C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41940  6 +     87928 ACA----------------C------------------A----C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6986  6 -     60166 ACA----------------C------------------A----C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13923  6 -     67232 ACA----------------C------------------A----C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41839  6 -     90634 ACA----------------C------------------A----C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43306  6 +     89403 ACA----------------C------------------A----C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177228  6 - 189387572 aca----------------c------------------a----c
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192045  6 -   9816681 ACA----------------C------------------A----C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26841  6 +     69807 ACA----------------C------------------A----C
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44027  6 -     80239 ACA----------------C------------------A----C
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2711  1 +      3019 --------------------------------------A-----
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981883  6 +   4620579 aca----------------g------------------a----c
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565388  6 -   2598838 ata----------------c------------------a----c
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3026  6 -      7103 ata----------------c------------------a----c
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3623  6 -     11706 ata----------------c------------------a----c
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7361  6 -     30655 ata----------------c------------------a----c
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33674  6 +     46564 ata----------------c------------------a----c
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93953  6 -     98465 ata----------------c------------------a----c
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7592  6 +     35169 ata----------------c------------------a----c
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51456  5 -     66298 -ca----------------c------------------a----c
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3956  5 -     18639 -CA----------------C------------------A----C
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840151  4 -  28871421 --a----------------c------------------a----c
i Pteropus_alecto.KB030862.1                             I 5 C 0
s Pteropus_vampyrus.KN525825.1                             3536662  4 -   4952924 --a----------------c------------------a----c
i Pteropus_vampyrus.KN525825.1                           I 5 C 0
s Puma_concolor.QAVW01001104.1                            18098409  5 +  38429054 -ca----------------c------------------a----c
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26215  6 +     91421 ACA----------------C------------------A----C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152707  6 -   7812017 ACA----------------C------------------A----C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7082  6 +     72585 ACA----------------C------------------A----C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52482  5 +     55069 -TA----------------C------------------A----A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914051  5 +   3329780 -ta----------------c------------------a----c
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              781  6 +      7119 ACA----------------C------------------A----C
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121389  6 + 195417433 aca----------------c------------------a----c
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235631  6 -   7961872 ACA----------------C------------------A----C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74068  4 -    116970 --a----------------c------------------a----c
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 7 C 0
s Saguinus_bicolor.k141_1429097                               3294  6 +     27962 ACA----------------C------------------A----C
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3189  6 +      6077 ACA----------------C------------------A----C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3279  6 +      5971 ACA----------------C------------------A----C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3201  6 +      5932 ACA----------------C------------------A----C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1543  6 -      4390 ACA----------------C------------------A----C
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390979  6 - 209938924 ACA----------------C------------------A----C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3150  6 +      5979 ACA----------------C------------------A----C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3913  6 -      4301 ACA----------------C------------------A----C
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7149  9 +     16473 -TA----------------T------------------AAGGAA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108316  6 + 121099817 aca----------------c------------------t----C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29883  6 -     47369 ACA----------------C------------------T----C
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30269  6 -     79414 ACA----------------C------------------T----C
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26960  6 -     34454 ACA----------------C------------------T----C
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14363  6 -     22428 ACA----------------C------------------T----C
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29515  6 -     47109 ACA----------------C------------------T----C
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237573  6 +   5703754 ACA----------------C------------------A----C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7163  6 +     21866 ACA----------------C------------------A----C
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115249  3 +    313613 -CA----------------C------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24534  6 +     27374 ACA----------------C------------------A----C
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28048  6 +     58920 ACA----------------C------------------A----C
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14544  6 -     45317 ACA----------------C------------------A----C
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22203  6 -     42441 ACA----------------C------------------A----C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24881  6 -     29113 ACA----------------C------------------A----C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27955  6 -     48123 ACA----------------C------------------A----C
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857585  5 -   1910179 -CA----------------C------------------A----G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670665  5 +  18376816 -ca----------------c------------------a----c
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867675  6 +   3870691 aca----------------c------------------a----c
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5942  5 -     97271 -CA----------------C------------------A----C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124186  5 +    196729 -CA----------------C------------------A----C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                    6643080  5 +  69701581 -TA----------------C------------------A----C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390472  6 +   1523678 ACA----------------C------------------A----C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13420  5 +     22964 -ca----------------c------------------a----c
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1992  6 +      5583 AGA----------------C------------------A----C
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190920  5 +    199430 -CA----------------C------------------A----C
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104891  5 -    539355 -CA----------------C------------------A----C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6164  6 +      6850 ACA----------------C------------------A----C
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6239  6 +     20590 aca----------------c------------------a----c
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352428  6 - 186847797 aca----------------c------------------a----c
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19089  6 -     31044 AGA----------------C------------------A----C
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479452  2 -    610378 -CA-----------------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20080  6 +     26378 ACA----------------C------------------A----C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32758  6 -     78344 ACA----------------C------------------A----C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19405  6 +     25722 ACA----------------C------------------A----C
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27710  6 -     62838 ACA----------------C------------------A----C
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27756  6 +     46913 ACA----------------C------------------A----C
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8563  6 -     28527 ACA----------------C------------------A----C
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29647  6 -     64340 ACA----------------C------------------A----C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27684  6 -     63452 ACA----------------C------------------A----C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9129  6 +     22490 ACA----------------C------------------A----C
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2555  6 -      6147 ACA----------------C------------------A----C
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9460  6 -     13050 ACA----------------C------------------A----C
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254700  6 -   6242583 ACA----------------C------------------A----C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         724  6 +     19340 ACA----------------C------------------A----C
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172763  5 -    200418 -TC----------------C------------------A----C
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479720  6 -  10818551 aca----------------c------------------a----c
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833433  6 -   4065304 aca----------------c------------------a----c
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7452  6 -     70247 aca----------------c------------------a----c
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360981  5 -  33153633 -TA----------------T------------------G----C
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2972  3 -     21056 -CA----------------C------------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181124  5 +   5085361 -ca----------------c------------------a----c
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24525  6 -     30710 ACA----------------G------------------A----C
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23432  6 -    147434 ACA----------------G------------------A----C
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75607  5 +   5488506 -ta----------------c------------------a----c
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104264  5 -    112863 -CA----------------C------------------A----C
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173464  6 -    224448 CCA----------------C------------------A----C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28157  5 -     86975 -CA----------------C------------------A----C
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       452  6 -       753 aca----------------c------------------a----c
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 I 36
s Ziphius_cavirostris.ZipCav_flattened_line_572595             389  5 +      1812 -TA----------------C------------------A----C
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Octodon_degus.JH651603.1                                11054356 42 -  11899542 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Microgale_talazaci.MicTal_scaffold_6613                    45220  5 +    145209 I
e Echinops_telfairi.JH980293.1                            62854174  5 - 111700974 I
e Perodicticus_potto.k141_1854441                            18000  0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          25631  0 +     31479 C
e Otolemur_garnettii.GL873799.1                             352426  0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        39423  0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564137  0 - 199412804 C
e Nycticebus_coucang.k141_3846325                             2632  0 -      3937 C
e Nycticebus_bengalensis.LG01                             93635878  0 + 196305487 C
e Loris_tardigradus.ctg83                                  5043506  0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                            9843  0 +     19643 C
e Galago_senegalensis.k141_991736                             7807  0 +     22493 C
e Galago_moholi.ctg3793                                     124262  0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       18844  0 -     45910 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    48514 15 +     77746 I
e Rattus_norvegicus.chr16                                 37022029 15 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            36738 15 +     52041 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             3058 11 +     22231 I
e Peromyscus_maniculatus.KI615324.1                         246131 15 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    2933 15 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    92041 27 -    140218 I
e Mus_spretus.CM004101.1                                  39496113 12 + 130317789 I
e Mus_pahari.LT608297.1                                   58216682 14 +  89631738 I
e Mus_musculus.chr8                                       41686817 12 + 129401213 I
e Mus_caroli.LT608237.1                                   35592432 12 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15961703  8 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17428487 52 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 49397 15 -    140813 I
e Ellobius_talpinus.LOJH01026522.1                           12245 15 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          30258 21 +    110024 I
e Cricetulus_griseus.LT883664.1                          213113980 146 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 43541 15 -     83289 I
e Condylura_cristata.JH655891.1                           35806433 134 +  53390261 I
e Carlito_syrichta.NW_007259797.1                           269536  0 +    496798 C
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     24389 32 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4767  6 +     36723 A--------------A-----A--------------------A------------G-------C
s Acinonyx_jubatus.LLWD01001279.1                           812157  5 +   1699592 a--------------a-----a--------------------g------------a--------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24421  1 +     63021 G---------------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 32 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414616  5 +  29979442 a--------------a-----a--------------------a------------g--------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214927  5 +    347723 a--------------a-----a--------------------g------------g--------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47083  6 +     53615 A--------------A-----A--------------------A------------G-------A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43044  6 +     44087 A--------------A-----A--------------------A------------G-------A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15669  6 -     21945 A--------------A-----A--------------------A------------G-------A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17352  6 +     32033 A--------------A-----A--------------------A------------G-------A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71518  6 -     84148 A--------------A-----A--------------------A------------G-------A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43757  6 -     78289 A--------------A-----A--------------------A------------G-------A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43196  6 +     55831 A--------------A-----A--------------------A------------G-------A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41646  6 -     64179 A--------------A-----A--------------------A------------G-------A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23280  6 -     24835 A--------------A-----A--------------------A------------G-------A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40271  6 +     45454 A--------------A-----A--------------------A------------G-------A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45917  6 +     70886 A--------------A-----A--------------------A------------G-------A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8093  6 +     30854 A--------------A-----A--------------------A------------G-------A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32227  6 +     42133 A--------------A-----A--------------------A------------G-------A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584605  5 +   2318259 A--------------A-----A--------------------G------------G--------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176416  5 -    412891 G--------------C-----G--------------------A------------G--------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49720  5 -     68529 A--------------A-----A--------------------G------------G--------
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     472  6 +     17741 A--------------A-----A--------------------A------------G-------A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1097  6 -     15923 A--------------A-----A--------------------A------------G-------A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1372  6 -     16391 A--------------A-----A--------------------A------------G-------A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                932  6 -     17186 A--------------A-----A--------------------A------------G-------A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15320  6 -     32367 A--------------A-----A--------------------A------------A-------G
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18844  4 -     45910 ---------------------A--------------------A------------T-------G
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4688  5 -     15198 A--------------C-----A--------------------A------------G--------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273980  6 +  21539123 A--------------A-----A--------------------A------------G-------A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10147  6 +     48076 A--------------A-----A--------------------A------------G-------A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5284  6 -     28759 A--------------A-----A--------------------A------------G-------A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32837  6 +     44353 A--------------A-----A--------------------A------------G-------A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48207  6 -     71267 A--------------A-----A--------------------A------------G-------A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22266  6 -     33135 A--------------A-----A--------------------A------------G-------A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5498 13 +     11645 a--------------c-----a--------------------a------------cacatgatg
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5506 13 -     19611 a--------------c-----a--------------------a------------cacatggtg
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956514  5 -  23207421 a--------------a-----a--------------------g------------g--------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3723  5 -      4711 a--------------a-----a--------------------g------------g--------
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85614  5 +    124022 A--------------A-----A--------------------G------------G--------
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21146  5 +    288883 A--------------A-----A--------------------G------------G--------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355532  5 +  48749331 A--------------A-----A--------------------G------------G--------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754100  5 +   1948126 A--------------A-----A--------------------G------------g--------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544239  5 -  45695690 A--------------A-----A--------------------G------------G--------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529264  5 -   4408762 A--------------A-----A--------------------G------------G--------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7154  6 +     28062 A--------------A-----A--------------------A------------G-------A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42448  6 -     91139 A--------------A-----A--------------------A------------G-------A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19974  6 +     95584 A--------------A-----A--------------------A------------G-------A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19887  6 +    119600 A--------------A-----A--------------------A------------G-------A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9454  6 +     18648 A--------------A-----A--------------------A------------G-------A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8993  6 -     13885 A--------------G-----A--------------------A------------G-------A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1059  6 -      8861 A--------------A-----A--------------------A------------G-------A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453452  6 + 189096842 A--------------A-----A--------------------A------------G-------A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                974  6 +      8664 A--------------A-----A--------------------A------------G-------A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995678  1 +  23392119 ---------------------------------------------------------------g
i Cavia_aperea.AVPZ01000300.1                            I 6 I 4
s Cavia_porcellus.DS562891.1                               4999120  1 +  23407841 ---------------------------------------------------------------a
i Cavia_porcellus.DS562891.1                             I 6 I 4
s Cavia_tschudii.CavTsc_scaffold_23560                       62201  1 -     66877 ---------------------------------------------------------------A
i Cavia_tschudii.CavTsc_scaffold_23560                   I 6 I 4
s Camelus_bactrianus.KN276810.1                            7630278  5 +  17673402 A--------------A-----A--------------------G------------G--------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664564  5 +   7040546 A--------------A-----A--------------------G------------G--------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208224  5 +   1652518 A--------------A-----A--------------------G------------G--------
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504638  5 +  60362399 A--------------A-----A--------------------G------------G--------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8274  5 -     23171 A--------------A-----A--------------------G------------G--------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221617  5 +   9314153 a--------------a-----a--------------------g------------g--------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614752  5 +  59632846 a--------------a-----a--------------------g------------g--------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106333  5 -  63665305 a--------------a-----a--------------------g------------g--------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408335  5 -  46296322 A--------------A-----A--------------------G------------G--------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590608  5 +  44709034 A--------------A-----A--------------------G------------G--------
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    847 15 -      1880 catacacacac----a-----c--------------------a------------c--------
i Capromys_pilorides.CapPil_scaffold_652123              I 5 C 0
s Carlito_syrichta.NW_007259797.1                           269536  2 +    496798 ---------------------g--------------------g---------------------
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                634  5 -      1021 T--------------C-----A--------------------A------------G--------
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 I 33
s Castor_canadensis.CasCan_scaffold_39952                    26953  6 -     39886 A-------------CG-----T--------------------A------------G--------
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     78818  5 -    217609 A--------------A-----G--------------------G------------G--------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           4372  6 -     12580 A--------------A-----A--------------------A------------G-------A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42430  6 +     53515 A--------------A-----A--------------------A------------G-------A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370361  6 -  26074798 A--------------A-----A--------------------A------------G-------A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7250  6 -     34880 A--------------A-----A--------------------A------------G-------A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66345  6 -     89041 A--------------A-----A--------------------A------------G-------A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1493  4 -      5494 a--------------c-----g--------------------g---------------------
i Cephalopachus_bancanus.k141_1689090                    I 18 C 0
s Ceratotherium_simum.JH767749.1                          15491452  5 -  27778364 a--------------a-----a--------------------g------------a--------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18285  5 +     27315 A--------------A-----A--------------------G------------A--------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140266  6 -   4669795 a--------------a-----a--------------------a------------g-------a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44008  6 +     47900 A--------------A-----A--------------------A------------G-------A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43833  6 -     44860 A--------------A-----A--------------------A------------G-------A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43821  6 -    148725 A--------------A-----A--------------------A------------G-------A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        25998  6 -     40656 A--------------A-----A--------------------A------------G-------A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5964  6 +     20796 A--------------A-----A--------------------A------------G-------A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11081  6 -     17524 A--------------A-----A--------------------A------------G-------A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26803  6 -     34525 A--------------A-----A--------------------A------------G-------A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10584  6 -     25376 A--------------A-----A--------------------A------------G-------A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363180  6 -  39242232 A--------------A-----A--------------------A------------G-------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268896  6 +  21565898 A--------------A-----A--------------------A------------G-------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31270  6 -     45857 A--------------A-----A--------------------A------------G-------A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26169  6 -     32606 A--------------A-----A--------------------A------------G-------A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2328  6 +      8499 A--------------A-----A--------------------A------------G-------G
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24726  6 +     70610 A--------------A-----A--------------------A------------G-------A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21695  6 +     36323 A--------------A-----A--------------------A------------G-------A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12062 11 -     19938 A--------------CGCATGA--------------------A------------G-------G
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29873 13 -     33796 A--------------C-----A--------------------A------------CACATGGTG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4390 13 -     15404 A--------------C-----A--------------------A------------CACATGATG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8247  6 -     32913 A--------------A-----A--------------------A------------G-------A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18660  6 -     40346 A--------------A-----A--------------------A------------G-------A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18915  6 +    216457 A--------------A-----A--------------------A------------G-------A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18708  6 +     39636 A--------------A-----A--------------------A------------G-------A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238129 13 -   2543920 cacacacacac----a-----c------------------------------------------
i Chinchilla_lanigera.JH722012.1                         I 5 C 0
s Chiropotes_albinasus.k141_1946120                           3302  6 +      5346 A--------------A-----A--------------------A------------G-------A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41785  6 -    112038 A--------------A-----A--------------------A------------G-------A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7356  6 +     34062 A--------------A-----A--------------------A------------G-------A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342586  6 +  18827391 A--------------A-----A--------------------A------------G-------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9133  6 -     44032 A--------------A-----A--------------------A------------G-------A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303910  6 - 135778131 a--------------a-----a--------------------a------------g-------a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14047 12 +     15858 A--------------CACACAA-------------------AA------------G-------G
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605623 12 -    839153 a--------------cacacaaa-------------------a------------g-------g
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408339  6 -   2368649 a--------------a-----a--------------------a------------g-------a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378215  6 - 200372422 A--------------A-----A--------------------A------------G-------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1764  6 -     84244 A--------------A-----A--------------------A------------G-------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2048  5 -      8242 A--------------C-----A--------------------C------------A--------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43556  1 -     83289 G---------------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             I 15 I 1
s Cricetulus_griseus.LT883664.1                          213114126  1 - 224834208 c---------------------------------------------------------------
i Cricetulus_griseus.LT883664.1                          I 146 I 1
s Crocidura_indochinensis.CroInd_scaffold_77846               6711  5 +     12657 A--------------A-----A--------------------A------------G--------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3606  5 +     87169 a--------------a-----a--------------------g------------g--------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644261  6 -   1526836 C--------------A-----A--------------------A------------A-------A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17634 15 +     50838 tacacacacac----a-----t--------------------a------------c--------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 5 I 4
s Cuniculus_paca.CunPac_flattened_line_7025                   3564 16 +     36344 cacacacacac----a-----c--------------------a------------c-------a
i Cuniculus_paca.CunPac_flattened_line_7025              I 5 I 24
s Dasyprocta_punctata.DasPun_flattened_line_15900            27362 16 +     75252 C----ACACACACACA-----C--------------------A------------C-------A
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 5 I 4
s Dasypus_novemcinctus.JH564415.1                          2109415 11 -   2246927 G--------------AGCACAA--------------------A------------G-------G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291819  1 +  12879189 A---------------------------------------------------------------
i Daubentonia_madagascariensis.ctg71                     C 0 I 3
s Delphinapterus_leucas.KZ290073.1                        18625046  5 -  35494412 A--------------A-----G--------------------G------------G--------
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864437  5 -  20541912 A--------------C-----A--------------------A------------G--------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663741  3 -   1390856 ---------------------a--------------------g------------a--------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138529  5 -    198055 A--------------A-----A--------------------G------------A--------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98119 35 -    115145 cacacacacac----a-----cacacacacacacacacacaca------------c--------
i Dinomys_branickii.DinBra_scaffold_10381                I 5 I 2
s Dipodomys_ordii.KN672350.1                              18949742  5 -  37912305 ---------------a-----a--------------------a------------g-------a
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4677  5 -     10735 ---------------A-----A--------------------A------------G-------A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9612 20 +     14636 cacacacacacacaca-----c--------------------a------------c-------a
i Dolichotis_patagonum.DolPat_scaffold_80628             I 5 I 4
s Echinops_telfairi.JH980293.1                            62854179  2 - 111700974 ---------------------G--------------------A---------------------
i Echinops_telfairi.JH980293.1                           I 5 C 0
s Eidolon_helvum.AWHC01266696.1                               5515  5 +     19438 a--------------c-----a--------------------c------------g--------
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238979  5 -    607251 A--------------A-----A--------------------G------------G--------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107804 11 -  10337057 A--------------GATATAA--------------------G------------G-------A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30279  1 +    110024 c---------------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 21 I 1
s Ellobius_talpinus.LOJH01026522.1                           12260  1 +     18970 c---------------------------------------------------------------
i Ellobius_talpinus.LOJH01026522.1                       I 15 I 1
s Enhydra_lutris.KZ291758.1                               24915358  5 +  41312741 a--------------a-----a--------------------g------------g--------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578149  6 +  14770903 a--------------c-----a-c------------------g------------g--------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040609  5 -   4378816 a--------------a-----a--------------------g------------g--------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374547  5 +  39960074 a--------------a-----a--------------------g------------g--------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411335  5 -    498745 a--------------a-----a--------------------g------------g--------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665366  3 +   7059049 ---------------------A--------------------G------------G--------
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262113  6 +  21539334 A--------------A-----A--------------------A------------G-------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64392  5 -    133382 A--------------A-----A--------------------G------------G--------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4605  5 +      7672 A--------------A-----A--------------------G------------G--------
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14016 13 -     24895 A--------------C-----A--------------------A------------CACACAATG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41725 13 -     70999 A--------------C-----A--------------------A------------CACACAATG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85687 13 +    112731 A--------------C-----A--------------------A------------CACACAATG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42256 13 +     68309 A--------------C-----A--------------------A------------CACACAATG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52582 13 -     65740 A--------------C-----A--------------------A------------CACACAATG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23211 13 -     75513 A--------------C-----A--------------------A------------CACACAATG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47408 13 -     97555 A--------------C-----A--------------------A------------CACACAATG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4133 13 +     30972 A--------------C-----A--------------------A------------CACACAATG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41853 13 -     52037 A--------------C-----A--------------------A------------CACACAATG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58255 13 -    111500 A--------------C-----A--------------------A------------CACACAATG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246066  5 - 206538554 a--------------a-----a--------------------g------------a--------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115852  5 - 205367284 a--------------a-----a--------------------g------------a--------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26949  5 -     30238 A--------------A-----A--------------------G------------A--------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124262  4 -    137831 ---------------------A--------------------A------------T-------G
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7807  4 +     22493 ---------------------A--------------------A------------T-------G
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19882  6 -     32986 A--------------C-----A--------------------A------------T-------G
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 417  6 -     28519 A--------------A-----A--------------------G------------A-------G
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90684  5 -     95226 a--------------a-----a--------------------g------------g--------
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33750  6 -     36801 A--------------A-----A--------------------A------------G-------G
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5068  5 -      8343 ---------------A-----A--------------------A------------G-------C
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254081  6 - 186649187 a--------------a-----a--------------------a------------g-------a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1241  6 -     78134 A--------------A-----A--------------------A------------G-------G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13941 13 -     40692 A--------------C-----A--------------------A------------CACACAATG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35343 13 +     49394 A--------------C-----A--------------------A------------CACACAATG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60211 13 -     66874 A--------------C-----A--------------------A------------CACACAATG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9085 13 -     42923 A--------------C-----A--------------------A------------CACACAATG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16085 13 -     53142 A--------------C-----A--------------------A------------CACACAATG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30035  5 -    327341 A--------------G-----A--------------------G------------G--------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8442  5 +     48891 A--------------A-----A--------------------G------------G--------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6333  2 +      6687 -------------------------------------------------------C-------A
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6881  5 -     36432 A--------------A-----A--------------------G------------G--------
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553402  5 -   1711038 a--------------c-----a--------------------c------------g--------
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                315  5 -      2730 a--------------c-----a--------------------c------------g--------
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142089  6 -    630532 A--------------A-----A--------------------A------------G-------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68948  5 +     83186 A--------------A-----A--------------------G------------G--------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71102 20 +    143317 cacacacacacacaca-----c--------------------a------------c-------a
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 5 I 4
s Hylobates_agilis.k141_1155965                               5124  6 +     12352 A--------------A-----A--------------------A------------G-------A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12308  6 +     55766 A--------------A-----A--------------------A------------G-------A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051906  6 + 191637585 A--------------A-----A--------------------A------------G-------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800784  6 +  11177569 A--------------A-----A--------------------A------------G-------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3735  6 -    135385 C--------------A-----T--------------------A------------C-------A
i Hystrix_cristata.HysCri_scaffold_5660                  I 5 I 4
s Ictidomys_tridecemlineatus.JH393364.1                     386101  6 +   7955117 a--------------a-----a--------------------a------------a-------g
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1645 13 +     11955 a--------------a-----a--------------------a------------cacattacg
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2855  5 -     16823 A--------------A-----A--------------------G------------G--------
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65105  5 -     97402 A--------------A-----A--------------------G------------G--------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42524  6 +    110728 A--------------A-----A--------------------A------------G-------A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62178  6 -     65777 a--------------c-----a-c------------------g------------g--------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758734 13 +  30322482 A--------------C-----A--------------------A------------CACACAATG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3437  6 -     13097 A--------------A-----A--------------------A------------G-------A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3191  6 +      5940 A--------------A-----A--------------------A------------G-------A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3021  6 -      5717 A--------------A-----A--------------------A------------G-------A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9397  6 -     11567 A--------------A-----A--------------------A------------G-------A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10778  6 -     12945 A--------------A-----A--------------------A------------G-------A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8248 13 +     29618 A--------------C-----A--------------------A------------CACATAATG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8244 13 +     31569 A--------------C-----A--------------------A------------CACATAATG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8255 13 +     24756 A--------------C-----A--------------------A------------CACATAATG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8254 13 +     16388 A--------------C-----A--------------------A------------CACATAATG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812768  5 -   3914936 a--------------a-----a--------------------g------------a--------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17093  6 +     24238 A--------------A-----A--------------------A------------G-------G
i Lepus_americanus.LepAme_scaffold_56121                 I 1 C 0
s Lipotes_vexillifer.KE559953.1                             334391  5 +    662738 A--------------A-----A--------------------G------------G--------
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333151  6 -   1826925 A--------------A-----A--------------------A------------G-------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9843  4 +     19643 ---------------------A--------------------A------------T-------C
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043506  4 -   6120653 ---------------------a--------------------a------------t-------c
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080267 11 +  43346337 A--------------GACCCAA--------------------A------------G-------A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613907  5 +  59628241 a--------------a-----a--------------------g------------g--------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44535  6 -     61512 A--------------A-----A--------------------A------------G-------A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372197  6 -  60120075 A--------------A-----A--------------------A------------G-------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24460  6 +     30207 A--------------A-----A--------------------A------------G-------A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21563  6 -     24934 A--------------A-----A--------------------A------------G-------A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24413  6 +     30527 A--------------A-----A--------------------A------------G-------A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35589  6 -     50087 A--------------A-----A--------------------A------------G-------A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45333  6 +     51645 A--------------A-----A--------------------A------------G-------A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414535  6 - 187317192 a--------------a-----a--------------------a------------g-------a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398766  6 +  25927173 a--------------a-----a--------------------a------------g-------a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47938  6 -     62418 A--------------A-----A--------------------A------------G-------A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  476  6 +     14901 A--------------A-----A--------------------A------------G-------A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44410  6 +     59329 A--------------A-----A--------------------A------------G-------A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270318  6 +    668171 A--------------A-----A--------------------A------------G-------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  594  6 +      1732 A--------------A-----A--------------------A------------G-------A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2116  6 +     17132 A--------------A-----A--------------------A------------G-------A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222466  5 -    270270 A--------------C-----A--------------------G------------G--------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321615  6 +  24302211 A--------------A-----A--------------------A------------G-------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356447  6 -    752769 A--------------A-----A--------------------A------------G-------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672821  5 -    737560 a--------------a-----a--------------------g------------g--------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220109  5 +    317179 a--------------a-----a--------------------g------------g--------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500321  6 +  40650429 a--------------a-----a--------------------a------------a-------g
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149663  5 +    207569 a--------------c-----a--------------------g------------g--------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25462  5 -     74585 A--------------A-----A--------------------G------------G--------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49412  1 -    140813 G---------------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 15 I 1
s Mesoplodon_bidens.MesBid_scaffold_6114                     80690  5 +     93471 A--------------A-----A--------------------G------------G--------
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9563  6 +     17804 A--------------A-----A--------------------A------------G-------A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10065  6 -     12984 A--------------A-----A--------------------A------------G-------A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18379  6 -     26561 A--------------A-----A--------------------A------------G-------A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983856 13 +  93316391 a--------------c-----a--------------------a------------cacatgATG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45225  2 +    145209 ---------------------G--------------------A---------------------
i Microgale_talazaci.MicTal_scaffold_6613                I 5 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184382  5 +    200668 A--------------C-----A--------------------A------------G--------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961711  1 +  27267610 c---------------------------------------------------------------
i Microtus_ochrogaster.CM001695.1                        I 8 I 1
s Miniopterus_natalensis.LDJU01000034.1                    6362508  5 -   8254450 a--------------c-----a--------------------g------------g--------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41415  5 -     48117 A--------------C-----A--------------------G------------G--------
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21623  6 -     27822 A--------------A-----A--------------------A------------G-------A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7775  5 +     27589 A--------------A-----A--------------------G------------A--------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51653 13 -     62432 A--------------C-----A--------------------A------------CACATGATG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352789  5 +    437263 A--------------A-----G--------------------G------------G--------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178550  5 +    366855 A--------------C-----A--------------------A------------G--------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24803  5 -     82753 A--------------A-----A--------------------G------------G--------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17787  5 -     63510 A--------------G-----A--------------------G------------G--------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38475  6 +     47283 A--------------C-----A-------------------CA------------C--------
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82579  6 -     86153 A--------------A-----A--------------------A------------G-------G
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354390  5 +  14710649 a--------------a-----a--------------------g------------g--------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     62427 15 +     67721 cacacacacac----a-----c--------------------a------------c--------
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 5 C 0
s Myotis_brandtii.KE162005.1                               9792761  6 +  10118263 t--------------a-----a-c------------------a------------c--------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386891  6 +   6019432 a--------------t-----a-c------------------a------------t--------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382718  6 +   4330536 a--------------c-----a-c------------------g------------g--------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1530  6 +     18357 a--------------c-----a-c------------------g------------g--------
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119008 12 +    130748 A--------------CACACAA-------------------AA------------G-------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945566  9 +   3037898 C--------------A-CA-GA--------------------A------------A-------G
i Nannospalax_galili.KL204047.1                          I 79 C 0
s Nasalis_larvatus.k141_1350636                              28264  6 +     34575 A--------------A-----A--------------------A------------G-------A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468370  5 -  31847680 a--------------a-----a--------------------g------------a--------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226959  5 -   7148211 A--------------A-----G--------------------G------------G--------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127499  5 -    149072 A--------------C-----A--------------------A------------C--------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53017  6 -    132029 A--------------A-----A--------------------A------------G-------A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9112  6 -     16345 A--------------A-----A--------------------A------------G-------A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             14997  6 +     22201 A--------------A-----A--------------------A------------G-------A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413218  6 -  22158432 A--------------A-----A--------------------A------------G-------A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25395  6 -     54323 A--------------A-----A--------------------A------------G-------A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197500  5 +   9404916 a--------------a-----a--------------------g------------g--------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635878  4 + 196305487 ---------------------A--------------------A------------T-------G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2632  4 -      3937 ---------------------A--------------------A------------T-------G
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564137  4 - 199412804 ---------------------A--------------------A------------T-------G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550458  6 -   3988456 A--------------A-----A--------------------A------------G-------G
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Octodon_degus.JH651603.1                                11054398  4 -  11899542 ---------------a-----c--------------------a------------c--------
i Octodon_degus.JH651603.1                               I 42 I 4
s Odobenus_rosmarus.KB229312.1                             1450967  5 +   2017862 a--------------a-----a--------------------g------------g--------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435568  5 -    630418 a--------------a-----a--------------------g------------g--------
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13568  5 +    150152 a--------------a-----a--------------------g------------g--------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92068  1 -    140218 C---------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                I 27 I 1
s Onychomys_torridus.OnyTor_scaffold_28377                    2948  1 -     41509 A---------------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_28377               I 15 I 1
s Orcinus_orca.KB316932.1                                  8096241  5 +  10937097 A--------------A-----A--------------------G------------G--------
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12917 11 -     14239 A--------------GACACAG--------------------A------------C-------A
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102930  6 - 174332312 A--------------A-----A--------------------A------------G-------G
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38547  5 +    559221 a--------------a-----a--------------------g------------g--------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39423  4 -     51505 ---------------------A--------------------A------------T-------G
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352426  4 +   1103335 ---------------------a--------------------g------------t-------g
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403562  5 -  44047080 A--------------A-----A--------------------G------------G--------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4081  5 +     17875 A--------------A-----A--------------------G------------G--------
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472110  6 - 189151597 a--------------a-----a--------------------a------------g-------c
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23774  5 -    230217 A--------------A-----A--------------------G------------A--------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461100  5 -  18783137 a--------------a-----a--------------------g------------a--------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971759  5 +   8748460 a--------------a-----a--------------------g------------a--------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615000  5 +   2937107 A--------------A-----A--------------------G------------G--------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242448  6 - 183742232 a--------------a-----a--------------------a------------g-------a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8910  6 +     21308 A--------------A-----A--------------------A------------G-------A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291484  6 -  20919399 A--------------A-----A--------------------A------------G-------A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21558  6 -     27687 A--------------A-----A--------------------A------------G-------A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14704  6 +     16796 A--------------A-----A--------------------A------------G-------A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21515  6 -     23640 A--------------A-----A--------------------A------------G-------A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14377  5 +     78924 C--------------A-----A--------------------G------------G--------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25631  4 +     31479 ---------------------A--------------------A------------T-------G
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18000  4 -     24908 ---------------------A--------------------A------------T-------G
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1073  5 +      9367 ---------------A-----A--------------------A------------G-------A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246146  1 +  18517816 c---------------------------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      I 15 I 1
s Phocoena_phocoena.PhoPho_flattened_line_46867              12085  5 -     15039 A--------------A-----G--------------------G------------G--------
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1722  6 +     55023 A--------------A-----A--------------------A------------G-------A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1272  6 -     89929 A--------------A-----A--------------------A------------G-------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1861  6 +     40849 A--------------A-----A--------------------A------------G-------A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253525  6 +  14605196 a--------------a-----a--------------------a------------g-------a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3069  1 +     22231 -------------------------------------------------------t--------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 11 C 0
s Pithecia_albicans.k141_1239476                             64161  6 +    207309 A--------------A-----A--------------------A------------G-------A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5254  6 -     25401 A--------------A-----A--------------------A------------G-------A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               30997  6 +     58159 A--------------A-----A--------------------A------------G-------A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31273  6 +     63561 G--------------A-----A--------------------A------------G-------A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31033  6 +     51148 G--------------A-----A--------------------A------------G-------A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556003  6 -   4542175 A--------------A-----A--------------------A------------G-------A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31017  6 +     51125 A--------------A-----A--------------------A------------G-------A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4175  5 -      8168 A--------------A-----A--------------------G------------A--------
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7415  6 +     39866 A--------------A-----A--------------------A------------G-------A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2499  6 -      9282 A--------------A-----A--------------------A------------G-------A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41903  6 -     87950 A--------------A-----A--------------------A------------G-------A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42297  6 -     88961 A--------------A-----A--------------------A------------G-------A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          6995  6 -     39403 A--------------A-----A--------------------A------------G-------A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41946  6 +     87928 A--------------A-----A--------------------A------------G-------A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6992  6 -     60166 A--------------A-----A--------------------A------------G-------A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13929  6 -     67232 A--------------A-----A--------------------A------------G-------A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41845  6 -     90634 A--------------A-----A--------------------A------------G-------A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43312  6 +     89403 A--------------A-----A--------------------A------------G-------A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177234  6 - 189387572 a--------------a-----a--------------------a------------g-------a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192051  6 -   9816681 A--------------A-----A--------------------A------------G-------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26847  6 +     69807 A--------------A-----A--------------------A------------G-------A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44033  6 -     80239 A--------------A-----A--------------------A------------G-------A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2712  2 +      3019 -------------------------------------------------------C-------A
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981889 13 +   4620579 a--------------c-----a--------------------a------------cacACAATG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565394 13 -   2598838 a--------------c-----a--------------------a------------tacaTGATG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3032 13 -      7103 a--------------c-----a--------------------a------------cacataatg
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3629 13 -     11706 a--------------c-----a--------------------a------------cacatgatg
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7367 13 -     30655 a--------------c-----a--------------------a------------cacatgatg
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33680 13 +     46564 a--------------c-----a--------------------a------------cacatgatg
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93959 13 -     98465 a--------------c-----a--------------------a------------cacataatg
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7598 13 +     35169 a--------------c-----a--------------------a------------cacatgatg
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36753  1 +     52041 c---------------------------------------------------------------
i Psammomys_obesus.NESX01036366.1                        I 15 I 1
s Pteronotus_parnellii.KE847780.1                            51461  5 -     66298 a--------------c-----a--------------------c------------g--------
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3961  5 -     18639 A--------------A-----A--------------------G------------G--------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840155  5 -  28871421 a--------------c-----a--------------------g------------g--------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536666  5 -   4952924 a--------------c-----a--------------------a------------g--------
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098414  5 +  38429054 a--------------a-----a--------------------g------------a--------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26221  6 +     91421 A--------------A-----A--------------------A------------G-------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152713  6 -   7812017 A--------------A-----A--------------------A------------G-------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7088  6 +     72585 A--------------A-----A--------------------A------------G-------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52487  5 +     55069 A--------------A-----A--------------------G------------G--------
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022044  1 -  90668790 c---------------------------------------------------------------
i Rattus_norvegicus.chr16                                I 15 I 18
s Rhinolophus_sinicus.LVEH01000134.1                       2914056  5 +   3329780 a--------------c-----a--------------------g------------g--------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              787  6 +      7119 A--------------A-----A--------------------A------------G-------A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121395  6 + 195417433 a--------------a-----a--------------------a------------g-------a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235637  6 -   7961872 A--------------A-----A--------------------A------------G-------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74072 17 -    116970 a--------------c-----a--------------------cacacacacagagg--------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3300  6 +     27962 A--------------A-----A--------------------A------------G-------A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3195  6 +      6077 A--------------A-----A--------------------A------------G-------A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3285  6 +      5971 A--------------A-----A--------------------A------------G-------A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3207  6 +      5932 A--------------A-----A--------------------A------------G-------A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1549  6 -      4390 A--------------A-----A--------------------A------------G-------A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390985  6 - 209938924 A--------------A-----A--------------------A------------G-------A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3156  6 +      5979 A--------------A-----A--------------------A------------G-------A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3919  6 -      4301 A--------------A-----A--------------------A------------G-------A
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7158  5 +     16473 A--------------A-----A--------------------G------------A--------
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108322  6 + 121099817 A--------------A-----A--------------------A------------G-------A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29889  6 -     47369 A--------------A-----A--------------------A------------G-------A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30275  6 -     79414 A--------------A-----A--------------------A------------G-------A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26966  6 -     34454 A--------------A-----A--------------------A------------G-------A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14369  6 -     22428 A--------------A-----A--------------------A------------G-------A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29521  6 -     47109 A--------------A-----A--------------------A------------G-------A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237579  6 +   5703754 A--------------A-----A--------------------A------------G-------A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7169  6 +     21866 A--------------A-----A--------------------A------------G-------A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115252  2 +    313613 ------------------------------------------A------------C--------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24540  6 +     27374 A--------------A-----A--------------------A------------G-------A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28054  6 +     58920 A--------------A-----A--------------------A------------G-------A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14550  6 -     45317 A--------------A-----A--------------------A------------G-------A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22209  6 -     42441 A--------------A-----A--------------------A------------G-------A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24887  6 -     29113 A--------------A-----A--------------------A------------G-------A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27961  6 -     48123 A--------------A-----A--------------------A------------G-------A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48529  1 +     77746 C---------------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                I 15 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126            1857590  5 -   1910179 A--------------A-----G--------------------A------------G--------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670670  5 +  18376816 g--------------a-----a--------------------g------------g--------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867681  2 +   3870691 a--------------a------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525              5947  5 -     97271 A--------------A-----A--------------------G------------G--------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124192  2 +    196729 ------------------------------------------G------------G--------
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                    6643085  5 +  69701581 C--------------A-----g--------------------g------------g--------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390478  6 +   1523678 A--------------A-----A--------------------A------------G-------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13425  5 +     22964 a--------------G-----A--------------------G------------G--------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                1998 12 +      5583 A--------------CTCACAA-------------------AA------------G-------A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190925  5 +    199430 A--------------A-----A--------------------G------------C--------
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104896  5 -    539355 A--------------A-----A--------------------G------------C--------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6170  4 +      6850 A--------------C-----G--------------------G---------------------
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6245  4 +     20590 a--------------c-----g--------------------g---------------------
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352434  6 - 186847797 a--------------a-----a--------------------a------------g-------a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19095 11 -     31044 A--------------TGCACAA--------------------A------------G-------G
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479454  5 -    610378 A--------------C-----A--------------------A------------G--------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20086  6 +     26378 A--------------A-----A--------------------A------------G-------A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32764  6 -     78344 A--------------A-----A--------------------A------------G-------A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19411  6 +     25722 A--------------A-----A--------------------A------------G-------A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27716  6 -     62838 A--------------A-----A--------------------A------------G-------A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27762  6 +     46913 A--------------A-----A--------------------A------------G-------A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8569  6 -     28527 A--------------A-----A--------------------A------------G-------A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29653  6 -     64340 A--------------A-----A--------------------A------------G-------A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27690  6 -     63452 A--------------A-----A--------------------A------------G-------A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9135  6 +     22490 A--------------A-----A--------------------A------------G-------A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2561  6 -      6147 A--------------A-----A--------------------A------------G-------A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9466  6 -     13050 A--------------A-----A--------------------A------------G-------A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254706  6 -   6242583 A--------------A-----A--------------------A------------G-------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         730  6 +     19340 A--------------A-----A--------------------A------------G-------A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172768  5 -    200418 A--------------A-----A--------------------G------------G--------
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479726 11 -  10818551 a--------------gacagga--------------------g------------G-------A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833439  7 -   4065304 a-c------------a-----c--------------------a------------g-------g
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7458  7 -     70247 a-c------------a-----c--------------------a------------c-------g
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360986  5 -  33153633 A--------------A-----A--------------------G------------G--------
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2975  2 -     21056 ------------------------------------------A------------G--------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181129  5 +   5085361 a--------------a-----a--------------------a------------g--------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24531 13 -     30710 A--------------C-----A--------------------A------------CACACAATG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23438 13 -    147434 A--------------C-----A--------------------A------------CACACAATG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75612  5 +   5488506 a--------------a-----a--------------------g------------g--------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104269  5 -    112863 A--------------A-----A--------------------G------------G--------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173470  6 -    224448 A--------------C-----A--------------------A------------A-------G
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28162  5 -     86975 A--------------A-----A--------------------G------------G--------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       494  3 -       753 ------------------------------------------a------------c-------a
i Zapus_hudsonius.ZapHud_scaffold_533409                 I 36 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             394  5 +      1812 A--------------A-----A--------------------G------------G--------
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     31077 204 -     56120 I
e Heterocephalus_glaber.JH602082.1                         1926228 5443 -  22651954 I
e Mus_spretus.CM004101.1                                  39496113 12 + 130317789 I
e Mus_pahari.LT608297.1                                   58216682 14 +  89631738 I
e Mus_musculus.chr8                                       41686817 12 + 129401213 I
e Mus_caroli.LT608237.1                                   35592432 12 + 120012414 I
e Mesocricetus_auratus.KB708134.1                         17428487 52 +  29670104 I
e Jaculus_jaculus.JH725527.1                               1238862 36 +   9596543 I
e Condylura_cristata.JH655891.1                           35806433 134 +  53390261 I
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C
e Allactaga_bullata.AllBul_scaffold_20030                    17351 36 -     61208 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       4773 33 +     36723 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCA
s Acinonyx_jubatus.LLWD01001279.1                           812162 33 +   1699592 ca----catataAATAGAAAAGACTTG----ATAA-----TGCTCC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24423 29 +     63021 ------TATATGAAAGGAT--GACTTG----TTAG-----TACTCC
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414621 33 +  29979442 CA----CATTTGAATAGAATGGGGTTG----TTAA-----TGCTCC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214932 33 +    347723 ca----catttaaatagaaggggctTG----TTCC-----TGCTCC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17387 29 -     61208 --------TCTGAAAAGACAGACCTAG----TTAA-----TACACC
i Allactaga_bullata.AllBul_scaffold_20030                I 36 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47089 33 +     53615 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43050 33 +     44087 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15675 33 -     21945 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17358 33 +     32033 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71524 33 -     84148 AA----CGTGTAAGTGGAGGAAACCTG----TTAG-----TGCTCC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43763 33 -     78289 AA----CGTGTAAGTGGAGGAAACCTG----TTAG-----TGCTCC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43202 33 +     55831 AA----CGTGTAAGTGGAGGAAACCTG----TTAG-----TGCTCC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41652 33 -     64179 AA----CGTGTAAGTGGAGGAAACCTG----TTAG-----TGCTCC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23286 33 -     24835 AA----CGTGTAAGTGAAGGAAACCTG----TTAG-----TGCTCC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40277 33 +     45454 AA----CGTGTAAGTGGAGGAAACCTG----TTAG-----TGCTCC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45923 33 +     70886 AA----CGTGTAAGTGGAGGAAACCTG----TTAG-----TGCTCC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8099 33 +     30854 AA----CGTGTAAGTGGAGGAAACCTG----TTAG-----TGCTCC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32233 33 +     42133 AA----CGTGTAAGTGGAGGAAACCTG----TTAG-----TGCTCC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584610 33 +   2318259 GA----ATTTCAAATAAAAGAGGTTTG----TTAa-----tgctct
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176421 33 -    412891 GG----TATTTCAGTAGAGCAGACTTC----TGAA-----GGATCC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49725 33 -     68529 GA----CTTTCAAATAAAAGAGGTTTG----TTAC-----TGCTCT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     478 33 +     17741 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1103 33 -     15923 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1378 33 -     16391 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                938 33 -     17186 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGGTCC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15326 34 -     32367 TG---ACATTTAAATAGACAAGACTTG----TTAA-----TGCTCT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18848 32 -     45910 GG----GCTTTTAACAAAGG-GACTTG----TTAG-----TGCCCC
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4693 33 -     15198 GA----TATTTCAGTTGAGCAGGCTTG----TGAA-----GGATCC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               273986 33 +  21539123 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10153 33 +     48076 AA----CATGTAAGTGGAGGAAACTTG----TTAA-----TGCTCC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5290 33 -     28759 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32843 33 +     44353 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48213 33 -     71267 AA----CATGTAAGTGGAGGAAACTTG----TTAA-----TGCTCC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22272 33 -     33135 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5511 33 +     11645 gg----gctTTCAATAGAGGGGACTTG----TTAG-----TGCTCC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5519 33 -     19611 gg----gctttcaatagagGGGACTTG----TTAG-----TGCTCC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956519 33 -  23207421 gA----CATTCAAATAAAAGAGATTTG----TTAA-----TGCTCC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3728 33 -      4711 ga----CATTCAAATAAAAGAGATTTG----TTAA-----TGCTCC
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85619 33 +    124022 GA----ATTTCAAATAAAAGAGGTTTG----TTAA-----TGCTCT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21151 33 +    288883 GA----ATTTCAAATAAAAGAGGCTTG----TTAA-----tgctct
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355537 33 +  48749331 GA----ATTTCAAATAAAAGAGGCTTG----TTAA-----tgctct
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754105 33 +   1948126 ga----atttgaaataaaagagGCTTG----TTAa-----tgctct
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544244 33 -  45695690 GA----ATTTCAAATAAAAGAGGCTTG----TTAA-----tgctct
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529269 33 -   4408762 GA----ATTTCAAATACAAGAGGCTTG----TTAa-----tgctct
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7160 33 +     28062 AA----CATGTAACTGGAGGAAACTTG----TTAG-----TGCGCC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42454 33 -     91139 AA----CATGTAACTGGAGGAAACTTG----TTAG-----TGCGCC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  19980 33 +     95584 AA----CATGTAACTGGAGGAAACTTG----TTAG-----TGCGCC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19893 33 +    119600 AA----CATGTAACTGGAGGAAACTTG----TTAG-----TGCGCC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9460 33 +     18648 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              8999 33 -     13885 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1065 33 -      8861 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453458 33 + 189096842 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                                980 33 +      8664 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630283 32 +  17673402 GA-----ATTTAAATCAAACACGTTTG----TTAA-----TGCTCC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664569 32 +   7040546 GA-----ATTTAAATCAAACACGTTTG----TTAA-----TGCTCC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208229 32 +   1652518 GA-----ATTTAAATCAAACACGTTTG----TTAA-----TGCTCC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504643 33 +  60362399 CA----CATTTAAATAGAATAAACTTG----TTAA-----CGCTTT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8279 33 -     23171 CA----CATTTAAATAGAATAAACTTG----TTAA-----CGCTTT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221622 33 +   9314153 ca----catTTAAATAGAATAAACTTG----TTAA-----CGCTTT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614757 33 +  59632846 ca----catTTAAATAGAATAAACTTG----TTAA-----CGCTTT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106338 33 -  63665305 ca----catTTAAATAGAATAAACTTG----TTAA-----CGCTTT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408340 33 -  46296322 GA----ATTTCAAATAAAAGAGGTTTG----TTAA-----TGCTCT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590613 33 +  44709034 GA----ATTTCAAATAAAAGAGGTTTG----TTAA-----TGCTCT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    862 29 -      1880 -t---gaaTATAAATAGGTAAGAATA--------A-----TGCTTC
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269538 36 +    496798 -a----cattTAAATAGAGGAAACTTG----TGAG-CTAGTACTCC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_170178               5006 33 +      5315 GA----TGTTTCAGTAGAGCAGACTTG----TGGG-----GGATCC
i Carollia_perspicillata.CarPer_scaffold_170178          I 129 n 33
s Castor_canadensis.CasCan_scaffold_39952                    26960 33 -     39886 GA----CATCTAAATAGATGAGACTCA----TTAA-----TGCTCC
i Castor_canadensis.CasCan_scaffold_39952                I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78823 33 -    217609 GA----CGTTTAAATAAAAGAGTTCTG----TTAA-----TACTCC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995683 34 +  23392119 AA---GAATTTGGATAGGTCAGATTAG----TTAG-----TACTCC
i Cavia_aperea.AVPZ01000300.1                            I 4 C 0
s Cavia_porcellus.DS562891.1                               4999125 34 +  23407841 aa---gaATTTAGATAGGTAAGGTTAG----TTAG-----TACTCC
i Cavia_porcellus.DS562891.1                             I 4 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62206 34 -     66877 AA---GAATTTAGATAGGTAAGGTTAG----TTAG-----TACTCC
i Cavia_tschudii.CavTsc_scaffold_23560                   I 4 C 0
s Cebuella_niveiventris.k141_592277                           4378 33 -     12580 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42436 33 +     53515 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370367 33 -  26074798 AA----CATGTAAGTGGAGGAAACTCG----TTAG-----TGCTCC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7256 33 -     34880 AA----CATGTAAGTGGAGGAAACTCG----TTAG-----TGCTCC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66351 33 -     89041 AA----CACGTAAGTGGAGGAAACTCG----TTAG-----TGCTCC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1497 37 -      5494 -a----catttaaatagaggaaacttg----tgagctatgtattcc
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491457 30 -  27778364 ga----cattTCAATAGAAGAGACTT-------GA-----TGGTCC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18290 30 +     27315 GA----CATTTCAATAGAAGAGACTT-------GA-----TGGTCC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140272 33 -   4669795 aa----catttaagtaGAGGAAACTTG----TTAG-----TGCTCC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44014 33 +     47900 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43839 33 -     44860 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43827 33 -    148725 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26004 33 -     40656 AA----CAATTAAGTAGAGGAAATTTG----TTAG-----TGCTCC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           5970 33 +     20796 AA----CAATTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11087 33 -     17524 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26809 33 -     34525 AA----CAATTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10590 33 -     25376 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363186 33 -  39242232 AA----CAATTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268902 33 +  21565898 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31276 33 -     45857 AA----CAATTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26175 33 -     32606 AA----CAATTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2334 33 +      8499 AA----CAATTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24732 33 +     70610 AA----CAATTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21701 33 +     36323 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12073 33 -     19938 GA----CATTTAAGTAGCGGAGACTCG----TGAC-----TGCTCT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29886 33 -     33796 GG----GCTTTCGATAGAGGGGACTTG----TTAG-----TACTCC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4403 33 -     15404 GG----GCTTTCGATAGAGGGGACTTG----TTAG-----TACTCC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8253 33 -     32913 AA----CATGTGAGTGGTGGAAACTTT----TGAG-----TGCTCC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18666 33 -     40346 AA----CATGTGAGTGGAGGAAACTTT----TGAG-----TGCTCC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18921 33 +    216457 AA----CATGTGAGTGGAGGAAACTTT----TGAG-----TGCTCC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18714 33 +     39636 AA----CATGTGAGTGGAGGAAACTTT----TGAG-----TGCTCC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238142 29 -   2543920 -a---gaatgtaaATAGGTAAGGCTA--------G-----GATTCC
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3308 33 +      5346 AC----CATGTAATTGGAGGAAACTTG----TTAG-----TGCTCC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41791 33 -    112038 AA----CATGTAACTGGAGGAGACTTG----TTAG-----TGCGCC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7362 33 +     34062 AA----CATGTAACTGGAGGAGACTTG----TTAG-----TGCGCC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342592 33 +  18827391 AA----CATTTAAGTAGAAGAAACTTG----TTAG-----TGCTCC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9139 33 -     44032 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303916 33 - 135778131 aa----catttaagtAGAGGAAACTTG----TTAG-----TGCTCC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14059 33 +     15858 AA----CATTTAAATGGGGGATGCTTG----CTAA-----TGCTCT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605635 33 -    839153 aa----caTTTAAATGGGGGGTGCTTG----CTAA-----TGCTCT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             408345 33 -   2368649 aa----catttaagtAGAGGAAACTTG----TTAG-----TGCTCC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378221 33 - 200372422 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1770 33 -     84244 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806567 14 +  53390261 -----------------------NNNN----NNNN-----NNNNNN
i Condylura_cristata.JH655891.1                          I 134 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2053 32 -      8242 GA----TATTTAAATAGAAC-GACTTG----TCAA-----AGCTTC
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43558 29 -     83289 ------TATCTGAAAAACT--GACTTG----TTAA-----TGAACC
i Cricetomys_gambianus.CriGam_scaffold_14425             I 1 C 0
s Cricetulus_griseus.LT883664.1                          213114128 29 - 224834208 ------cacttgaAAAGAT--GACTTG----TTAA-----TGCGCC
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6716 32 +     12657 TA----TATTTAGATAAAATAGACTTC----TTAA-----AGTTC-
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3611 33 +     87169 ca----gatataaCTAGAAGGGACTTG----TTAA-----TGCTCC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644267 38 -   1526836 GA---GCATTTAGATAAACAATACTTGCTCCTTAA-----TGCTCC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17653 30 +     50838 gat---aatttaaataGATAAGTTTG--------G-----TATTTC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 4 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3604 34 +     36344 ga---gaatttaaatATGTAAGACTAG----TTAG-----TATCCT
i Cuniculus_paca.CunPac_flattened_line_7025              I 24 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27382 34 +     75252 CA---GAATTTAAATAGGTAAGAGTAG----TTAG-----TACTCC
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 4 C 0
s Dasypus_novemcinctus.JH564415.1                          2109426 32 -   2246927 GC----CACTTAAGTAGGGGA-GCTCG----TGAC-----GGCTCT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291823 32 +  12879189 GG----GCTTTAAATAGA-GGGACTTG----TTAG-----TGCTCC
i Daubentonia_madagascariensis.ctg71                     I 3 C 0
s Delphinapterus_leucas.KZ290073.1                        18625051 33 -  35494412 GA----CATTCAAATAAAAGAGTTTTG----TTAA-----TGCTCC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864442 33 -  20541912 GA----TATTTAAGTAGAGCAGACTTG----TGAA-----TGATCC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663744 30 -   1390856 ga----catttCAATAGAAGAGACTT-------GA-----TGGTCC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138534 30 -    198055 GA----CATTTCAATAGAAGAGACTT-------GA-----TGGTCC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98156 29 -    115145 g----gaatggaaataggtAAGGCTA--------G-----TATTCC
i Dinomys_branickii.DinBra_scaffold_10381                I 2 C 0
s Dipodomys_ordii.KN672350.1                              18949747 32 -  37912305 ga----TATGCCAATAGGTGAGGCTTG----TTA------TGCTCC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4682 32 -     10735 GA----TATGCCAATAGATGAGACTTG----TTA------TGCTCC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9636 34 +     14636 ca---caatttaAATAGGTAAGATTAG----TTAG-----TACTTA
i Dolichotis_patagonum.DolPat_scaffold_80628             I 4 C 0
s Echinops_telfairi.JH980293.1                            62854181 33 - 111700974 CA----CATTGAAATAGACAAGTCTTT----TTAA-----TGAGTC
i Echinops_telfairi.JH980293.1                           C 0 I 208
s Eidolon_helvum.AWHC01266696.1                               5520 33 +     19438 ga----tattTAAATAGAGCAGATTTG----TGAA-----TGCTCC
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       238984 32 -    607251 GA----CTTTCAAATAAAAGAGGT-TG----TTAA-----TGCTct
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9107815 33 -  10337057 AA----CAATTAAACAAAAGAGACTTG----TTAA-----TACTCC
i Elephantulus_edwardii.JH947257.1                       C 0 I 189
s Ellobius_lutescens.LOEQ01008920.1                          30281 29 +    110024 ------tacctTAAGAGAT--GATTTG----TTAG-----TGCATC
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01026522.1                           12262 29 +     18970 ------taccTTAAAAGAT--GATTTG----TCAG-----TGCATC
i Ellobius_talpinus.LOJH01026522.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               24915363 33 +  41312741 CA----CATTTAAATAGAAGGGGCTTG----TTAA-----TGCtcc
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578155 33 +  14770903 ga----taTTTAGGTAGAGCAGATTTG----TGAA-----TGATCT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040614 33 -   4378816 ga----caTTGAAATAGAAGAGACTTG----TTAA-----TGCTCC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374552 33 +  39960074 ga----caTTGAAATAGAAGAGACTTG----TTAA-----TGCTCT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411340 33 -    498745 gA----CATTGAAATAGAAGAGACTTG----TTAA-----TGCTCC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665369 32 +   7059049 GA----TATTTGAATAGAAAGGAGTTT----TACA-----TTTTC-
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262119 33 +  21539334 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64397 22 -    133382 GA----CATTCAAATAAAAGAGATTT--------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 5
s Eubalaena_japonica.EubJap_flattened_line_118172             4610 33 +      7672 GA----CATTCAAATAAAAGAGATTTG----TTAA-----TGCTCC
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14029 33 -     24895 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41738 33 -     70999 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85700 33 +    112731 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42269 33 +     68309 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52595 33 -     65740 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23224 33 -     75513 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47421 33 -     97555 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4146 33 +     30972 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41866 33 -     52037 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58268 33 -    111500 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246071 33 - 206538554 ca----cacataaatagaaaagacTTG----GTAA-----TGCTCC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115857 33 - 205367284 ca----catataaatagaaaagacTTG----ATAA-----TGCTCC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26954 33 -     30238 CA----CATATAAATAGAAAAGACTTG----ATAA-----TGCTCC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124266 32 -    137831 GG----GCTTTTGACAAAGG-GACTTG----TTAG-----TGCCCC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7811 32 +     22493 GG----GCTTTTGACAAAGG-GACTTG----TTAG-----TGCCCC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19888 32 -     32986 GG----GCTTTTAAAAAAGG-GACTTG----TTAG-----AGCACC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 423 34 -     28519 GG---ACATTTAAATAGAGGAGACTTG----TTAA-----TCTTCC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90689 33 -     95226 gA----CTTTCAAATAAAAGAGGTTTG----TTAA-----Tgctct
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33756 34 -     36801 GG---ACATTTAAATAGACAAGACTTG----TTTG-----TGCTCC
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5073 33 -      8343 AA----CATTTAAGTAGAGGAAGCTTG----TTAG-----CGCTTC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254087 33 - 186649187 aa----catttaagtAGAGGAAACTTG----TTAG-----CGCTCC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1247 34 -     78134 GA---ACATTTAAATAGACGAGACTTG----TTTG-----TGCTCC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13954 33 -     40692 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35356 33 +     49394 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60224 33 -     66874 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9098 33 -     42923 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16098 33 -     53142 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30040 33 -    327341 CA----GATATAATGAGAAGGGACTTG----TTAA-----CGCTCC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8447 33 +     48891 GA----ATTTCAAATAAAAGAGGTTTG----TTAA-----TGCTCT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1931671  2 -  22651954 --------------------------------------------CC
i Heterocephalus_glaber.JH602082.1                       I 5443 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6335 31 +      6687 GA----CATTTAAATAGAA--GACTTG----TTAA-----TGTTCT
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6886 33 -     36432 GA----CATTCAAATAAAAGACATTTG----TTAA-----TGCTCC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553407 33 -   1711038 gg----tatTTAAATAGAACAGACTTG----TGAA-----CGTTCC
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                320 33 -      2730 tg----tatttaaatagaacAGACTTG----TGAA-----TGCTCC
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142095 33 -    630532 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68953 33 +     83186 CA----GAAAGAAAGAGAAGAGACTTG----TTAA-----TACTCC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71126 34 +    143317 ca---caatttaaATAGGTAAGACTAG----TTAG-----TACTCC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 4 C 0
s Hylobates_agilis.k141_1155965                               5130 33 +     12352 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12314 33 +     55766 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051912 33 + 191637585 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800790 33 +  11177569 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3745 34 -    135385 GA---ACATTTAAATAGGCAAGACTTG----TTAG-----TATTCT
i Hystrix_cristata.HysCri_scaffold_5660                  I 4 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386107 33 +   7955117 ag--a-cattca-acagacagGACTTG----TTAA-----TGCTCC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1658 33 +     11955 gg----gctttcaatagaggggacttg----ttAG-----TGCTCC
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2860 33 -     16823 GA----CATTCAAATAAAAGAGATTTG----TTAA-----TGCTCC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238898 29 +   9596543 --------NNNNNNNNNNNNNNNNNNN----NNNN-----NNNNNN
i Jaculus_jaculus.JH725527.1                             I 36 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65110 33 -     97402 GA----CATTCAGATAAAAGAGATTTG----TTAA-----TGCTCC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42530 33 +    110728 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62184 33 -     65777 gg----tatttaggtagagcaGACTTG----TGAA-----TGATCT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758747 33 +  30322482 GG----GCTTTAAATAGAGGAGACTTG----TTAG-----TGCTCC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3443 33 -     13097 AA----CATGTAATTGGAGGAAACTTG----TTAG-----TGCTCC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3197 33 +      5940 AA----CATGTAATTGGAGGAAACTTG----TTAG-----TGCTCC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3027 33 -      5717 AA----CATGTAATTGGAGGAAACTTG----TTAG-----TGCTCC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9403 33 -     11567 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10784 33 -     12945 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8261 33 +     29618 GG----GCTTTCAATAGAGGGGACTTG----TTAG-----TGCTCC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8257 33 +     31569 GG----GCTTTCAATAGAGGGGACTTG----TTAG-----TGCTCC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8268 33 +     24756 GG----GCTTTCAATAGAGGGGACTTG----TTAG-----TGCTCA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8267 33 +     16388 GG----GCTTTCAATAGAGGGGACTTG----TTAG-----TGCTCC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812773 33 -   3914936 ca----cattTAAATGGAAGGGGCTTG----TTAA-----TGCTCC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17099 32 +     24238 GA----CATTGAAATAAAAGAGAATTA----TTAA-----TGCTC-
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             334396 33 +    662738 GA----CATTCAAATAAAAGAGATTTG----TTAA-----TGCTCC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333157 33 -   1826925 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9847 32 +     19643 GG----GCTTTTAACAAAGG-GACTTG----TTAG-----TGCCCC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043510 32 -   6120653 gg----gcttttaacaaagg-GACTTG----TTAG-----TGCCCC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080278 33 +  43346337 GA----CATTTAAATAAAAGAGACTTG----TTAG-----TGCTCC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613912 33 +  59628241 ca----catttaaatagaataaacttg----ttaa-----tgcttt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44541 33 -     61512 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372203 33 -  60120075 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24466 33 +     30207 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21569 33 -     24934 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24419 33 +     30527 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35595 33 -     50087 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45339 33 +     51645 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414541 33 - 187317192 aa----catttaagtaGAGGAAACTTG----TTAG-----TGCTCC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398772 33 +  25927173 aa----catttaagtaGAGGAAACTTG----TTAG-----TGCTCC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47944 33 -     62418 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  482 33 +     14901 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44416 33 +     59329 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270324 33 +    668171 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  600 33 +      1732 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2122 33 +     17132 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222471 33 -    270270 GA----TGTTTAAATAGAACAGATTTG----TGAA-----TGCTCC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321621 33 +  24302211 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356453 33 -    752769 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672826 33 -    737560 ga----cATTTAAATAGAAGAGACTTT----TTAA-----CTCTCC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220114 33 +    317179 ga----caTTTAAATAGAAGAGACTTT----TTAA-----CGCTCC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500327 33 +  40650429 gg--a-CATTCA-ACAGACAGGACTTG----TTAA-----TGCTCC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149668 33 +    207569 ga----tatttaaacagaacagactag----tgaa-----ttcTCC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25467 33 -     74585 CA----CATTTAAATAGAAGGGGCTTG----TTAA-----TGCTCC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49414 29 -    140813 ------TGTCTGAAAAGAT--GACTTG----TTAG-----TACTCC
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80695 33 +     93471 GA----CATTCAAATAAAAAAGATTTG----TTTA-----TGCTCC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9569 33 +     17804 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10071 33 -     12984 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18385 33 -     26561 AA----CATGTAAGTGGAGGAAACTTG----TTAG-----TGCTCC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983869 33 +  93316391 GG----GCTTTCAATAGAGGGGACTTG----TTTG-----TACTCC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45227 33 +    145209 CA----CATTTAAATAAATAAGTTTTG----TTTA-----TGATCT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 186
s Micronycteris_hirsuta.MicHir_scaffold_2233                184387 33 +    200668 GA----TATTTAAGCAGAGCAGACTTG----TGAA-----GGATCC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961713 29 +  27267610 ------taccTTAAATGAT--GACTTG----TTAG-----TGTGTC
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362513 33 -   8254450 ga----tATTTAAGTAGAGCAGACTTG----TGAA-----TGACCC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41420 33 -     48117 GA----TATTTAAGTAGAGCAGACTTG----TGAA-----TGACCC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21629 33 -     27822 TA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7780 33 +     27589 CA----CATTTAAATGGAAGGGGCTTG----TTAA-----TGCTCC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51666 33 -     62432 GG----GCTTTCAACAGAGGGGACTTG----TTTG-----TACTCC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352794 33 +    437263 GA----CATTCAAATAAAAGAGTTTTG----TTAA-----TGCTCC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178555 33 +    366855 GA----TACTTAAGTAGAGCAGACTTG----TGAA-----TGATCC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24808 33 -     82753 GA----CTTTCAAATAAAAGAGGTTTG----TTAA-----TGCTCT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17792 33 -     63510 CA----GATATAATGAGAAGGGACTTG----TTAA-----CGTTCC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38481 33 +     47283 GA----TATTTAAGTAGAGCAGACTTG----TGAA-----TGATCC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592444 29 + 120012414 ------tctctcaaaaaat--GACTTG----TTAG-----AAATCC
i Mus_caroli.LT608237.1                                  I 12 C 0
s Mus_musculus.chr8                                       41686829 29 + 129401213 ------tctctcaaaaaat--GACTTG----TTAG-----AAATCC
i Mus_musculus.chr8                                      I 12 C 0
s Mus_pahari.LT608297.1                                   58216696 29 +  89631738 ------tctctcaaaagAT--GACTTG----TTAG-----AAATCC
i Mus_pahari.LT608297.1                                  I 14 C 0
s Mus_spretus.CM004101.1                                  39496125 29 + 130317789 ------tctctcaaaaaat--GACTTG----TTAG-----AAATCC
i Mus_spretus.CM004101.1                                 I 12 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82585 34 -     86153 GG---ACACTTAAAGAGACGAGATTTG----TTTG-----TGCTCC
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354395 33 +  14710649 ca----catTTAAATAGAAGGGGCTTG----TTAG-----TGCtcc
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     62442 29 +     67721 -a---gaaagtaggtaggtaagaatc--------a-----tgcttc
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9792767 33 +  10118263 ga----TATTTAAGTAGAGCAGACTTG----TGAA-----TGATCC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386897 33 +   6019432 ga----taTTTAAGTAGAGCAGACTTG----TGAA-----TGATCC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382724 33 +   4330536 ga----taTTTAAGTAGAGCAGACTTG----TGAA-----TGATCC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1536 33 +     18357 ga----tatttaagtagagcaGACTTG----TGAA-----TGATCC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119020 33 +    130748 GA----TGTTTAAATGGAGGAGACTTG----CTAA-----TGCTCT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945575 29 +   3037898 GG---ACATCTGAAAAGGTAAGAC---------AG-----TGTTCT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28270 33 +     34575 AA----CATTTAAATAGAGGAAACTTG----TTAG-----TGCTCC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468375 33 -  31847680 ca----cattTAAATGGAAGGGGCTTG----ATAA-----TGCTCC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226964 33 -   7148211 GA----CATTCAAATAAAAGAGTTTTG----TTAA-----TGCTCC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127504 33 -    149072 GA----TATTCAAGTAGAGCACACTTG----TGAA-----TGATTT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53023 33 -    132029 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9118 33 -     16345 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15003 33 +     22201 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413224 33 -  22158432 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25401 33 -     54323 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197505 33 +   9404916 ca----catTTAAATAGAATAAACTTG----TTAA-----CACTTT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635882 27 + 196305487 GG----GCTTTTAACAAAGG-GACTTG----TTAG-----T-----
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2636 27 -      3937 GG----GCTTTTAACAAAGG-GACTTG----TTAG-----T-----
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564141 27 - 199412804 GG----GCTTTTAACAAAGG-GACTTG----TTAG-----T-----
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550464 31 -   3988456 GG----TATTGAAACA-AGGAGAATTA----CTCA-----TGCTC-
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11054406 33 -  11899542 ggttaaaatttaaatatataagtcTA--------G-----TATTTC
i Octodon_degus.JH651603.1                               I 4 C 0
s Odobenus_rosmarus.KB229312.1                             1450972 33 +   2017862 CA----CATTTAAGTAGAAGGGGCTTG----TTAA-----TGCTCC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435573 33 -    630418 ga----CTTTCAAATAAAAGAGGTTTG----TTAA-----TGCTCT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13573 33 +    150152 ga----CTTTCAAATAAAAGAGGTTTG----TTAA-----Tgctct
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92070 29 -    140218 ------CACCTTAAAAGAT--GACTTG----TTAG-----TGCGTC
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2950 29 -     41509 ------TACCTGGAAAGAT--GACTTG----TTAG-----TGCACC
i Onychomys_torridus.OnyTor_scaffold_28377               I 1 C 0
s Orcinus_orca.KB316932.1                                  8096246 33 +  10937097 GA----CATTCAAATAAAAGAGATTTG----TTAA-----TGCTCC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              12928 33 -     14239 CA----CATTTAAATAAAAGATATTTG----TTGG-----TGCTCC
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 196
s Oryctolagus_cuniculus.CM000791.1                       107102936 32 - 174332312 GA----CATTGAAATAAAAGAGAATTA----TTAA-----TGCTC-
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38552 33 +    559221 ca----catTTAAATAGAATAAACTTG----TTAA-----CACTTT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39427 32 -     51505 GG----GCTTTTGACAAAGG-GACTTG----TTAG-----TGCCCC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352430 32 +   1103335 GG----GCTTTTGACAAAGG-GACTTG----TTAG-----TGCCCC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403567 33 -  44047080 GA----ATTTCAAATAAAAGAGGTTTG----TTAa-----tgctct
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4086 33 +     17875 GA----ATTTCAAATAAAAGAGGTTTG----TTAA-----TGCTCT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472116 33 - 189151597 aA----CATTTAAGTAGAGGAAACTTG----TTAG-----CGCTCC
i Pan_troglodytes.CM009242.2                             C 0 I 18
s Panthera_onca.PanOnc_flattened_line_3271                   23779 33 -    230217 CA----CATATAAATAGAAAAGACTTG----ATAA-----TGCTCC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461105 33 -  18783137 ca----catataAATAGAAAAGACTTG----ATAA-----TGCTCC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971764 33 +   8748460 ca----catataAATAGAAAAGACTTG----ATAA-----TGCTCC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615005 33 +   2937107 GA----ATTTCAAATAAAAGAGGTTTG----TTAa-----tgctct
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242454 33 - 183742232 aa----catttaagtaGAGGAAACTTG----TTAG-----TGCTCC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8916 33 +     21308 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291490 33 -  20919399 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21564 33 -     27687 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14710 33 +     16796 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21521 33 -     23640 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14382 33 +     78924 CA----TATATAAATAGAAGGGACTTG----CTAA-----TGCTCC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25635 32 +     31479 GA----GCTTTTAACAAAGG-GACTTG----TTAG-----TGCCCC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18004 32 -     24908 GA----GCTTTTAACAAAGG-GACTTG----TTAG-----TGTCCC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1078 31 +      9367 GA----AATGCAAAT-GGTGAGGCTTG----TTA------TGCTCC
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246148 29 +  18517816 ------tACCTGGAAAGAT--GACTTG----TTAG-----TGTGCC
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31281  2 -     56120 --------------------------------------------CT
i Petromus_typicus.PetTyp_scaffold_17301                 I 204 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12090 33 -     15039 GA----CATTCAAATAAAAGAGTTTTG----TTAA-----TGCTCC
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1728 33 +     55023 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1278 33 -     89929 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1867 33 +     40849 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253531 33 +  14605196 aa----catttaagtaGAGGAAACTTG----TTAG-----TGCTCC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3070 33 +     22231 gg----tatttaggtagagcagatTTG----TGAA-----TGATCT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64167 31 +    207309 AA----C--GTGACTGGAGGAAACTTG----TTCG-----TGCTCC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5260 31 -     25401 AA----C--GTGACTGGAGGAAACTTG----TTCG-----TGCTCC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31003 31 +     58159 AA----C--GTGACTGGAGGAAACTTG----TTCG-----TGCTCC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31279 31 +     63561 AA----C--GTGACTGGAGGAAACTTG----TTCG-----TGCTCC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31039 31 +     51148 AA----C--GTGACTGGAGGAAACTTG----TTCG-----TGCTCC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556009 31 -   4542175 AA----C--GTGACTGGAGGAAACTTG----TTCG-----TGCTCC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31023 31 +     51125 AA----C--GTGACTGGAGGAAACTTG----TTCG-----TGCTCT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4180 33 -      8168 GA----CATTCAAATAAAAGAGGTTTG----TTAA-----TGCTCC
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7421 33 +     39866 AA----CATGGAAGTGGAGGAAACTTT----TGAG-----TGCTCC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2505 33 -      9282 AA----CATGGAAGTGGAGGAAACTTT----TGAG-----TGCTCC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41909 33 -     87950 AA----CATGGAAGTGGAGGAAACTTT----TGAG-----TGCTCC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42303 33 -     88961 AA----CATGGAAGTGGAGGAAACTTT----TGAG-----TGCTCC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7001 33 -     39403 AA----CATGGAAGTGGAGGAAACTTT----TGAG-----TGCTCC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41952 33 +     87928 AA----CATGGAAGTGGAGGAAACTTT----TGAG-----TGCTCC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          6998 33 -     60166 AA----CATGGAAGTGGAGGAAACTTT----TGAG-----TGCTCC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13935 33 -     67232 AA----CATGGAAGTGGAGGAAACTTT----TGAG-----TGCTCC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41851 33 -     90634 AA----CATGGAAGTGGAGGAAACTTT----TGAG-----TGCTCC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43318 33 +     89403 AA----CATGGAAGTGGAGGAAACTTT----TGAG-----TGCTCC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177240 33 - 189387572 aa----catttaagtaGAGGAAACTTT----TTAG-----TGCTCC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192057 33 -   9816681 AA----CATTTAAGTAGAGGAAACTTT----TTAG-----TGCTCC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26853 33 +     69807 AA----CATTTAAATAGAGGAAACTTG----TTAG-----TGCTCC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44039 33 -     80239 AA----CATTTAAATAGAGGAAACTTG----TTAG-----TGCTCC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2714 31 +      3019 GA----CATTTAAATAGAA--GACTTG----TTAA-----TGTTCT
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981902 33 +   4620579 GG----GCTTTAAATAGAGGGGACTTG----TTAG-----TGCTCC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565407 33 -   2598838 GG----GCTTTCAATAGAGGGGACTTG----TTAG-----TGCTCC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3045 33 -      7103 ag----gctttcaatagaggggacttG----TTAG-----TGCTCC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3642 33 -     11706 gg----gctttcaatagaggggaCTTG----TTAG-----TGCTCC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7380 33 -     30655 gg----gctttcaatagaggggactTG----TTAG-----TGCTCC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33693 33 +     46564 gg----gctttcaatagagGGGACTTG----TTAG-----TGCTCC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       93972 33 -     98465 ag----gctttcaatagaggggactTG----TTAG-----TGCTCC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7611 33 +     35169 gg----gctttcaatagaggggacttG----TTAG-----TGCTCC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36755 29 +     52041 ------tgtcTGAAAAGAT--GACTTG----TTAG-----TACTCC
i Psammomys_obesus.NESX01036366.1                        I 1 C 0
s Pteronotus_parnellii.KE847780.1                            51466 33 -     66298 ga----tatTTAAGTAGAGCAGACTTG----TGCA-----TGATCC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3966 33 -     18639 CA----CATTTAAATAGAAGGGGCTTG----TTAA-----TGCTCC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840160 33 -  28871421 ga----taTTTAAATAGAACAGATTTG----TGAA-----TGCTCC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536671 33 -   4952924 ga----taTTTAAATAGAACAGATTTG----TGAA-----TGCTCC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098419 33 +  38429054 ca----catataaatagaaaagacTTG----ACAA-----TGCTCC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26227 33 +     91421 AA----CATTTAAATAGAGGAAACTTG----TTAG-----TGCTCC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152719 33 -   7812017 AA----CATTTAAATAGAGGAAACTTG----TTAG-----TGCTCC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7094 33 +     72585 AA----CATTTGAATAGAGGAAACTTG----TTAG-----TGCTCC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52492 33 +     55069 GA----CTTTCAAATAAAAGAGGTTTG----TTAA-----TGCTCT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022063 29 -  90668790 ------tctctgaaaagat--GACATG----TTAG-----AACTCC
i Rattus_norvegicus.chr16                                I 18 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914061 33 +   3329780 ga----tATTTAAATAGAACAGACTTG----TGAA-----CGCTCC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              793 33 +      7119 AA----CATTTAAATAGAGGAAACTTG----TTAG-----TGCTCC
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121401 33 + 195417433 aa----catttaaatagaGGAAACTTG----TTAG-----TGCTCC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235643 33 -   7961872 AA----CATTTAAATAGAGGAAACTTG----TTAG-----TGCTCC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74089 33 -    116970 aa----tatttAAATAGAACAGATTTG----TGAA-----TGCTCC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3306 33 +     27962 AC----CATGTAATTGGAGGAAACTTG----TTAG-----TGCTCC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3201 33 +      6077 AA----CATGTAATTGGAGGAAACTTG----TTAG-----TGCTCC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3291 33 +      5971 AA----GATGTAATTGGAGGAAACTTG----TTAG-----TGCTCC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3213 33 +      5932 AA----CATGTAATTGGAGGAAACTTG----TTAG-----TGCTCC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1555 33 -      4390 AA----CATGTAATTGGAGGAAACTTG----TTAG-----TGCTCC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       390991 33 - 209938924 AA----CATGTAATTGGAGGAAACTTG----TTAG-----TGCTCC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3162 33 +      5979 AA----CATGTAATTGGAGGAAACTTG----TTAG-----TGCTCC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3925 33 -      4301 AA----CATGTAATTGGAGGAAACTTG----TTAG-----TGCTCC
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7163 33 +     16473 GA----ATTTCAAATAAAAGAGGTTTG----TTAA-----TGCTCT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108328 33 + 121099817 AA----CATGTAAGTGGAGGAAACTCA----TTGG-----TGCTCC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29895 33 -     47369 AA----CATGTAAGTGGAGGAAACTCA----TTGG-----TGCTCC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30281 33 -     79414 AA----CATGTAAGTGGAGGAAACTCA----TTGG-----TGCTCC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              26972 33 -     34454 AA----CATGTAAGTGGAGGAAACTCA----TTGG-----TGCTCC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14375 33 -     22428 AA----CATGTAAGTGGAGGAAACTCA----TTGG-----TGCTCC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29527 33 -     47109 AA----CATGTAAGTGGAGGAAACTCA----TTGG-----TGCTCC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237585 33 +   5703754 AA----CATGTAAGTGGAGGAAACTCG----TTAG-----TGCTCC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7175 33 +     21866 AA----CATGTAAGTGGAGGAAACTCG----TTAG-----TGCTCC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115254 31 +    313613 T------ATTTAAATAGAAGAGTTTTC----TTAA-----CGTTTC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24546 33 +     27374 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28060 33 +     58920 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14556 33 -     45317 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22215 33 -     42441 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24893 33 -     29113 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          27967 33 -     48123 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48531 29 +     77746 ------TATCTGAAAAGAT--GACTTG----TTAG-----TGTGCC
i Sigmodon_hispidus.SigHis_scaffold_20193                I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857595 33 -   1910179 AA----TATTGAAATGGAAGAGACTTG----CTCC-----TGCTCC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670675 32 +  18376816 ca----tatttaaatgaaatacatttc----ttaa-----tGTTC-
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867686 33 +   3870691 ag--a-CATTCA-ACAGACAGGACTTG----TTAA-----TGCTCC
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5952 33 -     97271 CA----TATTTAAATAGAAGGGGCTTG----TTAA-----TGCTCC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124194 33 +    196729 CA----GATATAATGAGAAGGGACTTG----TTAA-----CGCTCC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643090 33 +  69701581 aa----catttaaataaaagagtTCTG----TTAA-----TACTCC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390484 33 +   1523678 AA----CATTTAAGTAGAGGAAACTTG----TTAG-----TGCTCC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13430 33 +     22964 GA----TATTTAAGTAGAGCAAATTTG----TGAA-----CGATCC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2010 33 +      5583 GA----CGTTTAAATAGAGGAGACTTG----CTAA-----TGCTTT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190930 33 +    199430 GG----CATTTAAATAGAAGAGACTTG----TTGA-----TGCTCC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104901 33 -    539355 GG----CATTTAAATAGAAGAGACTTG----TTGA-----TGCTCC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6174 36 +      6850 -A----CATTTAAATAGAGGAAACTTG----CTAG-CTAGTACTCC
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6249 36 +     20590 -a----catttaaatagaggaaacttg----ctagcta-gtactcc
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352440 33 - 186847797 aa----catttaagtaGAGGAAACTTG----TTAG-----TGCTCC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19106 33 -     31044 GT----CATTTAAGTAGAGGAGACTCG----TGAC-----TGCTCT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479459 33 -    610378 GG----TATTTCAGCAAAGCAGACTTG----TGAA-----GGATCC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20092 33 +     26378 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32770 33 -     78344 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19417 33 +     25722 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27722 33 -     62838 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27768 33 +     46913 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8575 33 -     28527 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29659 33 -     64340 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27696 33 -     63452 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9141 33 +     22490 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2567 33 -      6147 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9472 33 -     13050 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254712 33 -   6242583 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         736 33 +     19340 AA----CATTTAAATAGAGGAAACGTG----TTAG-----TGCTCC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172773 33 -    200418 GA----TATTCAAATAAAAAAAGGTTG----TTAA-----TGCTCT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479737 33 -  10818551 GA----CATTTAAATAAAAGAGACTTG----TTGA-----CGCTCC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833446 33 -   4065304 ga----ctttGAAATAGAGGAGACTTG----CTAA-----TGCTCT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7465 33 -     70247 ga----cttttAAATAGAGGAGACTTG----CTAA-----TGCCCT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17360991 33 -  33153633 GA----CATTCAAATAAAAGACATTTG----TTAA-----TGCTCC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    2977 33 -     21056 TA----TATTTAAATAGCAGAATCTTC----TTTA-----TGTTCT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181134 33 +   5085361 CA----CATTTGAATAGAATGGGCTTG----TTAA-----TGCTCC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24544 33 -     30710 GG----GCTTTCAATAGAGGGGACTTG----TTAG-----TGCTCC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23451 33 -    147434 GG----GCTTTCAATAGAGGGGACTTG----TTAG-----TGCTCC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75617 32 +   5488506 ga-----ATTTAAATCAAACACGTTTG----TTAA-----TGCTCC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104274 33 -    112863 CA----CATTTAAATAGAATAAACTTG----TTAA-----CACTTT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173476 33 -    224448 GG---ACATTTA-ATAGACGAGACTTG----TTAA-----TGCTCT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28167 33 -     86975 CA----CATTTAAATAGAAGGGGCTTG----TTAA-----TGCTCC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       497 34 -       753 ca---cacCCTGAAAAGATAGACCTTG----TTAA-----TACTCC
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             399 33 +      1812 GA----CATTCAAATAAAAGAGATTTG----TTTA-----TGCTCC
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Mesocricetus_auratus.KB708134.1                         17428487 52 +  29670104 I
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4806 18 +     36723 TG----------------TGTTT-AGAGTAAG-----------TAC
s Acinonyx_jubatus.LLWD01001279.1                           812195 18 +   1699592 TT----------------TATTT-AGAGTGAA-----------TAC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24452 18 +     63021 TT----------------TATTA-AGAGTAAA-----------TAG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414654 18 +  29979442 TT----------------TATTT-Agagtaaa-----------taa
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214965 18 +    347723 TT----------------TATTT-AAAGTAAG-----------TAA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17416 18 -     61208 TG----------------TATTT-AGAGTGAG-----------TGA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47122 18 +     53615 TG----------------GGTTC-AGAGTAAG-----------TAA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43083 18 +     44087 TG----------------GGTTC-AGAGTAAG-----------TAA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15708 18 -     21945 TG----------------GGTTC-AGAGTAAG-----------TAA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17391 18 +     32033 TG----------------GGTTC-AGAGTAAG-----------TAA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71557 18 -     84148 TG----------------TGTTT-AGAGTAAG-----------TAA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43796 18 -     78289 TG----------------TGTTT-AGAGTAAG-----------TAA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43235 18 +     55831 TG----------------TGTTT-AGAGTAAG-----------TAA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41685 18 -     64179 TG----------------TGTTT-AGAGTAAG-----------TAA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23319 18 -     24835 TG----------------TGTTT-AGAGTAAG-----------TAA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40310 18 +     45454 TG----------------TGTTT-AGAGTAAG-----------TAA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45956 18 +     70886 TG----------------TATTT-AGAGTAAG-----------TAA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8132 18 +     30854 TG----------------TGTTT-AGAGTAAG-----------TAA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32266 18 +     42133 TG----------------TGTTT-AGAGTAAG-----------TAA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584643 18 +   2318259 tt----------------tattt-aaaataaa-----------tga
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 77
s Anoura_caudifer.AnoCau_scaffold_1412                      176454 18 -    412891 TT----------------TATTT-AGAGTAAA-----------TGA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49758 18 -     68529 TT----------------TATTT-AGAATAAA-----------TGA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     511 18 +     17741 TG----------------TGTTT-AGAGTAAG-----------TAA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1136 18 -     15923 TG----------------TGTTT-AGAGTAAG-----------TAA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1411 18 -     16391 TG----------------TGTTT-AGAGTAAG-----------TAA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                971 18 -     17186 TG----------------TGTTT-AGAGTAAG-----------TAA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15360 15 -     32367 TT----------------GATTT-AGAGTAAA--------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18880 18 -     45910 TT----------------TATTT-AGAGTGAG-----------GGG
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4726 18 -     15198 TT----------------TATTT-AGAGTCAA-----------TGA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274019 18 +  21539123 TG----------------TGTTT-AGAGTAAG-----------TAA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10186 18 +     48076 TG----------------TGTTT-AGAGTAAG-----------TAA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5323 18 -     28759 TG----------------TGTTT-AGAGTAAG-----------TAA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32876 18 +     44353 TG----------------TGTTT-AGAGTAAG-----------TAA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48246 18 -     71267 TG----------------TGTTT-AGAGTAAG-----------TAA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22305 18 -     33135 TG----------------TGTTT-AGAGTAAG-----------TAA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5544 16 +     11645 TT----------------TATT---GAGTCAA-----------TGA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5552 16 -     19611 TT----------------TACT---GAGTCAA-----------TGA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956552 18 -  23207421 TT----------------TATTT-AGAGTAAA-----------TGA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3761 18 -      4711 TT----------------TATTT-AGAGTAAA-----------TGA
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85652 18 +    124022 TT----------------CATTT-AAAATAAA-----------TGA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21184 18 +    288883 tt----------------tattt-aaaataaa-----------tga
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355570 18 +  48749331 tt----------------tattt-aaaataaa-----------tga
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754138 18 +   1948126 tt----------------tattt-aaaataaa-----------tga
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544277 18 -  45695690 tt----------------tattt-aaaataaa-----------tga
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529302 18 -   4408762 tt----------------tattt-aaaataaa-----------tga
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7193 18 +     28062 TG----------------TGTTT-AGAATAAG-----------TAA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42487 18 -     91139 TG----------------TGTTT-AGAATAAG-----------TAA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20013 18 +     95584 TG----------------TGTTT-AGAATAAG-----------TAA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19926 18 +    119600 TG----------------TGTTT-AGAATAAG-----------TAA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9493 18 +     18648 TG----------------TGTTT-AGAGTAAG-----------TAA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9032 18 -     13885 TG----------------TGTTT-AGAGGAAG-----------TAA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1098 18 -      8861 TG----------------TGTTT-AGAGTAGG-----------TAA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453491 18 + 189096842 TG----------------TGTTT-AGAGTAGG-----------TAA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1013 18 +      8664 TG----------------TGTTT-AGAGTAGG-----------TAA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630315 18 +  17673402 TT----------------TATTT-ATAGTAAA-----------CGA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664601 18 +   7040546 TT----------------TATTT-ATAGTAAA-----------CGA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208261 18 +   1652518 TT----------------TATTT-ATAGTAAA-----------CGA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504676 18 +  60362399 TT----------------TATTT-AGAGTAAA-----------TAA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8312 18 -     23171 TT----------------TATTT-AGAGTAAA-----------TAA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221655 18 +   9314153 TT----------------TATTT-AGAGTAAA-----------TAA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614790 18 +  59632846 TT----------------TATTT-AGAGTAAA-----------TAA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106371 18 -  63665305 TT----------------TATTT-AGAGTAAA-----------TAA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408373 18 -  46296322 TT----------------TATCT-AAAATAAA-----------TGA
i Capra_aegagrus.CM003241.1                              C 0 I 77
s Capra_hircus.CM004588.1                                 26590646 18 +  44709034 TT----------------TATCT-AAAATAAA-----------TGA
i Capra_hircus.CM004588.1                                C 0 I 77
s Capromys_pilorides.CapPil_scaffold_652123                    891 18 -      1880 TT----------------TATGT-AGAATAAG-----------AGA
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269574 18 +    496798 TT----------------TATTT-ACAGCAAA-----------TGG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                672 18 -      1021 TT----------------TATTC-AGAGTAAA-----------TGA
i Carollia_perspicillata.CarPer_scaffold_668536          I 33 C 0
s Castor_canadensis.CasCan_scaffold_39952                    26993 18 -     39886 TT----------------TATTT-AGAGTAAA-----------TGA
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78856 18 -    217609 TC----------------TATAC-AGAGTAAA-----------TGA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995717 18 +  23392119 TT----------------TATGT-AGCACAAA-----------TGA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999159 18 +  23407841 TT----------------TATGT-AGCACAAA-----------TGA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62240 18 -     66877 TT----------------TATGT-AGCACAAA-----------TGA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4411 18 -     12580 TG----------------TGTTT-AGAGTAAG-----------TAA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42469 18 +     53515 TG----------------TGTTT-AGAGTAAG-----------TAA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370400 18 -  26074798 CG----------------TGTTT-GGAGTAAG-----------TAA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7289 18 -     34880 CG----------------TGTTT-GGAGTAAG-----------TAA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66384 18 -     89041 CG----------------TGTTT-GGAGTAAG-----------TAA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1534 18 -      5494 tt----------------tattt-acagcaaa-----------tgg
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491487 18 -  27778364 TT----------------TATTT-AGAGTAAA-----------TGA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18320 18 +     27315 TT----------------TATTT-AGAGTAAA-----------TGA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140305 18 -   4669795 TG----------------GGTTC-AGAGTAAG-----------TAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44047 18 +     47900 TG----------------GGTTC-AGAGTAAG-----------TAA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43872 18 -     44860 TG----------------GGTTC-AGAGTAAG-----------TAA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43860 18 -    148725 TG----------------GGTTC-AGAGTAAG-----------TAA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26037 18 -     40656 TG----------------GGTTC-AGAGTAAG-----------TAA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6003 18 +     20796 TG----------------GGTTC-AGAGTAAG-----------GAA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11120 18 -     17524 TG----------------GGTTC-AGAGTAAG-----------TAA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26842 18 -     34525 TG----------------GGTTC-AGAGTAAG-----------TAA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10623 18 -     25376 TG----------------GGTTC-AGAGTAAG-----------TAA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363219 18 -  39242232 TG----------------GGTTC-AGAGTAAG-----------TAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268935 18 +  21565898 TG----------------GGTTC-AGAGTAAG-----------TAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31309 18 -     45857 TG----------------GGTTC-AGAGTAAG-----------TAA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26208 18 -     32606 TG----------------GGTTC-AGAGTAAG-----------TAA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2367 18 +      8499 TG----------------GGTTC-AGAGTAAG-----------TAA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24765 18 +     70610 TG----------------GGTTC-AGAGTAAG-----------TAA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21734 18 +     36323 TG----------------GGTTC-AGAGTAAG-----------TAA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12106 18 -     19938 TT----------------TACTT-GGAGTGCC-----------CAA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29919 16 -     33796 TT----------------TATT---GAGTCAA-----------TGA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4436 16 -     15404 TT----------------TATT---GAGTCAA-----------TGA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8286 18 -     32913 TG----------------TGTTT-AGAGTAAG-----------TAA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18699 18 -     40346 TG----------------TGTTT-AGAGTAAG-----------TAA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18954 18 +    216457 TG----------------TGTTT-AGAGTAAG-----------TAA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18747 18 +     39636 TG----------------TGTTT-AGAGTAAG-----------TAA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238171 34 -   2543920 TTTATGTAGAGGATTCCTTATGT-AGAGTACA-----------TGA
i Chinchilla_lanigera.JH722012.1                         C 0 I 4
s Chiropotes_albinasus.k141_1946120                           3341 18 +      5346 TG----------------TGTTT-AGAGTAAG-----------TAA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41824 18 -    112038 TG----------------TGTTT-AGAATAAG-----------TAA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7395 18 +     34062 TG----------------TGTTT-AGAATAAG-----------TAA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342625 18 +  18827391 TG----------------GGTTC-AGAGTAAG-----------TAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9172 18 -     44032 TG----------------GGTTC-AGAGTAAG-----------TAA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303949 18 - 135778131 TG----------------GGTTC-AGAGTAAG-----------TAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14092 18 +     15858 TT----------------TATTT-CAAGTACC-----------CAA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605668 18 -    839153 TT----------------TATTT-CAAGTACC-----------CAA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                 91 18 +      2406 ct----------------gATTT-AGAGTCAC-----------TGA
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          N 0 C 0
s Colobus_angolensis.KN981557.1                             408378 18 -   2368649 TG----------------GGTTC-AGAGTAAG-----------TAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378254 18 - 200372422 TG----------------GGTTC-AGAGTAAG-----------TAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1803 18 -     84244 TG----------------GGTTC-AGAGTAAG-----------TAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806581  9 +  53390261 NN----------------NNNNN-N----N----------------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2085 18 -      8242 TT----------------TATTT-AGAGTAAG-----------TGA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43587 18 -     83289 TT----------------TATTT-AGATTGAA-----------AAG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114157 18 - 224834208 TG----------------TATTT-AGAGTAAA-----------CAC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6748  8 +     12657 --------------------TTA-AATT-----------------A
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3644 18 +     87169 TT----------------TATTT-AAAGTGAA-----------TAC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644305 18 -   1526836 TC----------------TATTT-AGAGTAAA-----------TGA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17683 18 +     50838 TT----------------TACGT-TGAATCAA-----------TGA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3638 18 +     36344 TT----------------TATGT-AGAGCAAA-----------TGA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27416 18 +     75252 TT----------------TATGG-AGAGCAAA-----------TAA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109458 17 -   2246927 TT----------------TACTT-AGAGTACC-----------CA-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291855 18 +  12879189 TT----------------TATTT-AGAGTAAG-----------TGA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625084 18 -  35494412 TT----------------TATTT-AGAGTAAA-----------TGA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864475 18 -  20541912 TT----------------TATTT-AGAGTACA-----------TGA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663774 18 -   1390856 TT----------------TATTT-AGAGTAAA-----------TGA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138564 18 -    198055 TT----------------TATTT-AGAGTAAA-----------TGA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98185 18 -    115145 TT----------------TGTGT-AGGGTATG-----------TGA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 4
s Dipodomys_ordii.KN672350.1                              18949779 18 -  37912305 TT----------------TATTT-GGAGTAAA-----------TAA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4714 18 -     10735 TT----------------TATTT-GGAGTAAA-----------TAA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9670 18 +     14636 TT----------------TATGT-AGAGCAAA-----------TGA
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62854422 11 - 111700974 ------------------------AGAGTAAC-----------TGA
i Echinops_telfairi.JH980293.1                           I 208 C 0
s Eidolon_helvum.AWHC01266696.1                               5553 18 +     19438 TT----------------TATTT-AGAGTAAA-----------TGA
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239016 18 -    607251 tt----------------tattt-agaataaa-----------taa
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108037 18 -  10337057 TT----------------TGTTT-AGAATTAC-----------TAA
i Elephantulus_edwardii.JH947257.1                       I 189 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30310 18 +    110024 TT----------------TATTT-AGAGTAAA-----------AAG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12291 18 +     18970 TT----------------TATTT-AGAGTAAA-----------CAG
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915396 13 +  41312741 t---------------------t-agaataaa-----------taa
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578188 18 +  14770903 TT----------------CATTT-AGAGTAAA-----------AGA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040647 18 -   4378816 TT----------------TATTT-GGAGTAAA-----------TGA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374585 18 +  39960074 TT----------------TCTTT-AGAGTAAA-----------TGA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411373 18 -    498745 TT----------------TATTT-AGAGTAAA-----------TGA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665401 13 +   7059049 --------------------CTA-AGAGTAG------------AAA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262152 18 +  21539334 TG----------------GGTTC-AGAGTAAG-----------TAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64424 18 -    133382 TT----------------TATTT-AGAGTAAA-----------TTA
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 5 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4643 18 +      7672 TT----------------TATTT-AGAGTAAA-----------TGA
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14062 16 -     24895 TT----------------TATT---GAGTCAA-----------TGA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41771 16 -     70999 TT----------------TATT---GAGTCAA-----------TGA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85733 16 +    112731 TT----------------TATT---GAGTCAA-----------TGA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42302 16 +     68309 TT----------------TATT---GAGTCAA-----------TGA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52628 16 -     65740 TT----------------TATT---GAGTCAA-----------TGA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23257 16 -     75513 TT----------------TATT---GAGTCAA-----------TGA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47454 16 -     97555 TT----------------TACT---GAGTCAA-----------TGA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4179 16 +     30972 TT----------------TATT---GAGTCAA-----------TGA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41899 16 -     52037 TT----------------TATT---GAGTCAA-----------TGA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58301 16 -    111500 TT----------------TATT---GAGTCAA-----------TGA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246104 18 - 206538554 TT----------------TATTT-AGAGTGAA-----------TAC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115890 18 - 205367284 TT----------------TATTT-AGAGTGAA-----------TAC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 26987 18 -     30238 TT----------------TATTT-AGAGTGAA-----------TAC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124298 18 -    137831 TT----------------TATTT-AGAGTGAG-----------GAA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7843 18 +     22493 TT----------------TATTT-AGAGTGAG-----------GAA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19920 18 -     32986 TT----------------TATTT-ACAGTGAG-----------TAA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 457 18 -     28519 TT----------------TATTT-AGAGTCAA-----------TGA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90722 18 -     95226 tt----------------tattt-agaataaa-----------tGA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33790 18 -     36801 TT----------------TATTT-AGAGTAAA-----------TGA
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5106 18 -      8343 TG----------------TGTTT-AGAGGAAG-----------TAA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254120 18 - 186649187 TG----------------TGTTT-AGAGGAAG-----------TAA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1281 18 -     78134 TT----------------TATTG-AGAGTAAA-----------TGA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          13987 16 -     40692 TT----------------TATT---GAGTCAA-----------TGA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35389 16 +     49394 TT----------------TATT---GAGTCAA-----------TGA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60257 16 -     66874 TT----------------TATT---GAGTCAA-----------TGA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9131 16 -     42923 TT----------------TATT---GAGTCAA-----------TGA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16131 16 -     53142 TT----------------TATT---GAGTCAA-----------TGA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30073 18 -    327341 TT----------------TATAT-GAAGTGAA-----------TAC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8480 18 +     48891 TT----------------TATTT-AAAATAAA-----------TGA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1931673 18 -  22651954 TT----------------Tatgt-agaataaa-----------taa
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6366 18 +      6687 CT----------------CATTT-AGAGGAAC-----------AGA
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6919 18 -     36432 TT----------------TATTT-AGAGTAAA-----------TGA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553440 18 -   1711038 tt----------------tattt-agaataaa-----------tga
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                353 18 -      2730 TT----------------TATTT-AGAATAAA-----------TGA
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142128 18 -    630532 TG----------------TGTTT-AGAGTAAG-----------TAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  68986 18 +     83186 TT----------------TATTT-AGAGTGAA-----------TAC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71160 18 +    143317 TT----------------TATGT-AGAGCAAA-----------TGA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5163 18 +     12352 TG----------------TGTTT-AGAGTAAG-----------TAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12347 18 +     55766 AG----------------TGTTT-AGAGTAAG-----------TAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051945 18 + 191637585 TG----------------TGTTT-AGAGTAAG-----------TAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800823 18 +  11177569 TG----------------TGTTT-AGAGTAAG-----------TAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3779 18 -    135385 CT----------------TATGT-AGAGTAAA-----------TGA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386140 18 +   7955117 TT----------------TATTT-AGAGTAAA-----------TGA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1691 16 +     11955 TT----------------TATT---GAGTCGA-----------TGA
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2893 18 -     16823 TT----------------TATTT-AGAGTAAA-----------TGA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1238927  8 +   9596543 NN----------------NNNNN-N---------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 412
s Kogia_breviceps.KogBre_flattened_line_3970                 65143 18 -     97402 TT----------------TATTT-AGAGTAAA-----------TGA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42563 18 +    110728 TG----------------TGTTT-AGAGTAAG-----------TAA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62217 18 -     65777 TT----------------CATTT-AGAGTTAA-----------CGA
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14758780 16 +  30322482 TT----------------TATT---GAGTCGA-----------TGA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3476 18 -     13097 TG----------------TGTTT-AGAGTAAG-----------TAA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3230 18 +      5940 TG----------------TGTTT-AGAGTAAG-----------TAA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3060 18 -      5717 TG----------------TGTTT-AGAGTAAG-----------TAA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9436 18 -     11567 TG----------------TGTTT-AGAGTAAG-----------TAA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10817 18 -     12945 TG----------------AGTTT-AGAGTAAG-----------TAA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8294 16 +     29618 TT----------------TATT---GAGTCAA-----------TGA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8290 16 +     31569 TT----------------TATT---GAGTCAA-----------TGA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8301 16 +     24756 TT----------------TATT---GAGTCAA-----------TGA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8300 16 +     16388 TT----------------TATT---GAGTCAA-----------TGA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812806 18 -   3914936 TT----------------TATTT-AGAGTAAA-----------TAA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17131 14 +     24238 --------------------TTT-AGGGCAGA-----------TAA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             334429 18 +    662738 TT----------------TATTT-AGAGTAAG-----------TGA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333190 18 -   1826925 TG----------------GGTTC-AGAGTAAG-----------TAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9879 18 +     19643 TT----------------TATTT-AGAGTGAG-----------GGA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043542 18 -   6120653 TT----------------TATTT-AGAGTGAG-----------GGA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080311 18 +  43346337 TT----------------TATTT-AGAGTAAC-----------CAA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613945 18 +  59628241 tt----------------tattt-agaGTAAA-----------TAA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44574 18 -     61512 TG----------------GGTTC-AGAGTAAG-----------TAA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372236 18 -  60120075 TG----------------GGTTC-AGAGTAAG-----------TAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24499 18 +     30207 TG----------------GGTTC-AGAGTAAG-----------TAA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21602 18 -     24934 TG----------------GGTTC-AGAGTAAG-----------TAA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24452 18 +     30527 TG----------------GGTTC-AGAGTAAG-----------TAA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35628 18 -     50087 TG----------------GGTTC-AGAGTAAG-----------TAA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45372 18 +     51645 TG----------------GGTTC-AGAGTAAG-----------TAA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414574 18 - 187317192 TG----------------GGTTC-AGAGTAAG-----------TAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398805 18 +  25927173 TG----------------GGTTC-AGAGTAAG-----------TAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47977 18 -     62418 TG----------------GGTTC-AGAGTAAG-----------TAA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  515 18 +     14901 TG----------------GGTTC-AGAGTAAG-----------TAA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44449 18 +     59329 TG----------------GGTTC-AGAGTAAG-----------TAA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270357 18 +    668171 TG----------------GGTTC-AGAGTAAG-----------TAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  633 18 +      1732 TG----------------GGTTC-AGAGTAAG-----------TAA
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2155 18 +     17132 TG----------------GGTTC-AGAGTAAG-----------TAA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222504 18 -    270270 TT----------------TATTT-AGAGTAAA-----------TGA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321654 18 +  24302211 TG----------------GGTTC-AGAGTAAG-----------TAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356486 18 -    752769 TG----------------GGTTC-AGAGTAAG-----------TAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672859 18 -    737560 TT----------------TATTT-AGAGTAAA-----------TGA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220147 18 +    317179 TT----------------TATTT-AGAGTAAA-----------TGA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500360 18 +  40650429 TT----------------TATTT-AGAGTAAA-----------TGA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149701 18 +    207569 TT----------------TATTT-AGAATAAA-----------TGA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25500 13 -     74585 T---------------------T-AGAATAAA-----------TAA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49443 18 -    140813 TT----------------TATTT-AGAGTAAA-----------TAG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428539 16 +  29670104 ------------------tattt-agagTAAA-----------CCC
i Mesocricetus_auratus.KB708134.1                        I 52 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80728 18 +     93471 TT----------------TATTT-AGAGTAAA-----------TGA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9602 18 +     17804 TG----------------TGTTT-AGAGTAAG-----------TAA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10104 18 -     12984 TG----------------TGTTT-AGAGTAAG-----------TAA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18418 18 -     26561 TG----------------TGTTT-AGAGTAAG-----------TAA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983902 16 +  93316391 TT----------------TATA---GAGTCAA-----------TGA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45446 18 +    145209 TT----------------TATTG-AGAGTAAC-----------TGA
i Microgale_talazaci.MicTal_scaffold_6613                I 186 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184420 18 +    200668 TT----------------TATTT-AGAGTAAA-----------TGA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961742 18 +  27267610 TT----------------TATTT-AGAGTAAA-----------CAT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362546 18 -   8254450 TT----------------TATTT-AGAGTAAA-----------TGA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41453 18 -     48117 TT----------------TATTT-AGAGTAAA-----------TGA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21662 18 -     27822 TG----------------GGTTC-AGAGTAAG-----------TAA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7813 18 +     27589 TT----------------TATTT-AGAGTAAA-----------TAA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51699 16 -     62432 TT----------------TATA---GAGTCAA-----------TGA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352827 18 +    437263 TT----------------TATTT-AGAGTAAA-----------TGA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178588 18 +    366855 TT----------------TATTT-GGAGTAAA-----------TGA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24841 18 -     82753 TT----------------TGTTT-AGAATAAA-----------TGA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17825 18 -     63510 TT----------------TATAT-AAAGTGAA-----------TAC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38514 18 +     47283 TT----------------CATTt-agagtaaa-----------tga
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592473 18 + 120012414 TT----------------TATTT-AGAGAAAT-----------TAG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686858 18 + 129401213 TT----------------TATTT-AGAGAAAT-----------TAG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216725 18 +  89631738 TT----------------TATTT-AGAGAAAA-----------TAG
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39496154 18 + 130317789 TT----------------TATTT-AGAGAAAT-----------TAG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82619 18 -     86153 TT----------------TATTT-AGAGTAAA-----------TGA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354428 13 +  14710649 t---------------------t-agaataaa-----------taa
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     62471 18 +     67721 tt----------------tatGT-AGAATAAA-----------TTA
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9792800 18 +  10118263 TT----------------CATTT-AGAGTAAA-----------CGA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386930 18 +   6019432 TT----------------TATTT-AGAGTAAC-----------TGA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382757 18 +   4330536 TT----------------CATTT-AGAGTAAA-----------CGA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1569 18 +     18357 TT----------------CATTT-AGAGTAAA-----------CGA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119053 18 +    130748 TT----------------AATTT-AGAGTACC-----------CAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945604 18 +   3037898 TT----------------TATTT-AGAGAAAA-----------TAA
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28303 18 +     34575 TG----------------GGTTC-AGAGTAAG-----------TAA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468408 18 -  31847680 TT----------------TATTT-AGAGTAAA-----------TAA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1226997 18 -   7148211 TT----------------TATTT-AGAGTAAA-----------TGA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127537 18 -    149072 TT----------------TATTT-AGAGTAAA-----------TGA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53056 18 -    132029 TG----------------TGTTT-AGAGTAAG-----------TAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9151 18 -     16345 TG----------------TGTTT-AGAGTAAG-----------TAA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15036 18 +     22201 TG----------------TGTTT-AGAGTAAG-----------TAA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413257 18 -  22158432 TG----------------TGTTT-AGAGTAAG-----------TAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25434 18 -     54323 TG----------------TGTTT-AGAGTAAG-----------TAA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197538 18 +   9404916 TT----------------TATTT-AGAGTAAA-----------TAA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635909  8 + 196305487 ---------------------------GTGAG-----------GGA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2663  8 -      3937 ---------------------------GTGAG-----------GGA
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564168  8 - 199412804 ---------------------------GTGAG-----------GGA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550495 14 -   3988456 --------------------TTT-AGGGTAGA-----------TGA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11054439 18 -  11899542 TT----------------TATGT-AGAATAAA-----------TGA
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451005 18 +   2017862 TT----------------TATTT-AGAGTAAA-----------TAA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435606 18 -    630418 TT----------------TGTTT-GGAATAAA-----------TGA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13606 18 +    150152 tt----------------tattt-agaataaa-----------tGA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92099 18 -    140218 TT----------------TGTTT-AGAGTAAA-----------CAG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2979 18 -     41509 TT----------------TACTT-AGAGTAAG-----------CAG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096279 18 +  10937097 TT----------------TATTT-AGAGTAAA-----------TGA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13157 18 -     14239 TT----------------TATTT-ACAGTAAC-----------CAA
i Orycteropus_afer.OryAfe_flattened_line_171931          I 196 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102968 14 - 174332312 --------------------TTT-AGGGCAGA-----------TGA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38585 18 +    559221 TT----------------TATTT-AGAGTAAA-----------TAA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39459 18 -     51505 TT----------------TATTT-AGAGTGAG-----------GAA
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352462 18 +   1103335 TT----------------TATTT-AGAGTGAG-----------GAA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403600 18 -  44047080 tt----------------tattt-aaaataaa-----------tga
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4119 18 +     17875 TT----------------TATTT-AAAATAAA-----------TGA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.KZ622849.1                                 32832 18 -    110857 TG----------------TG-TTTAGAGGAAG-----------TAA
i Pan_troglodytes.KZ622849.1                             I 247 I 20
s Panthera_onca.PanOnc_flattened_line_3271                   23812 18 -    230217 TT----------------TATTT-AGAGTGAA-----------TAC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461138 18 -  18783137 TT----------------TATTT-AGAGTGAA-----------TAC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971797 18 +   8748460 TT----------------TATTT-AGAGTGAA-----------TAC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615038 18 +   2937107 tt----------------tattt-aaaataaa-----------tga
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242487 18 - 183742232 TG----------------GGTTC-AGAGTAAG-----------TAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8949 18 +     21308 TG----------------GGTTC-AGAGTAAG-----------TAA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291523 18 -  20919399 TG----------------GGTTC-AGAGTAAG-----------TAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21597 18 -     27687 TG----------------GGTTC-AGAGTAAG-----------TAA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14743 18 +     16796 TG----------------GGTTC-AGAGTAAG-----------TAA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21554 18 -     23640 TG----------------GGTTC-AGAGTAAG-----------TAA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14415 18 +     78924 TA----------------TATTT-AGAGTGAA-----------TGC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25667 18 +     31479 TT----------------TATTT-AGAGTGAG-----------GGG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18036 18 -     24908 TT----------------TATTT-AGAGTGAG-----------GGG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1109 18 +      9367 TT----------------TATTT-GGAGTAAA-----------TAA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246177 18 +  18517816 TT----------------TACTT-AGAGTAAA-----------CAG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31283 18 -     56120 TT----------------TATGT-AGAGTAAA-----------TGA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12123 18 -     15039 TT----------------TATTT-AGAGTAAA-----------TGA
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1761 18 +     55023 TG----------------GGTTC-AGAGTAAG-----------TAA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1311 18 -     89929 TG----------------GGTTC-AGAGTAAG-----------TAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1900 18 +     40849 TG----------------GGTTC-AGAGTAAG-----------TAA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253564 18 +  14605196 TG----------------GGTTC-AGAGTAAG-----------TAA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3103 18 +     22231 TT----------------CATTT-TGAGTAAA-----------TGA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64198 18 +    207309 TG----------------TGTTT-AGAGTCAG-----------TAA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5291 18 -     25401 TG----------------TGTTT-AGAGTCAG-----------TAA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31034 18 +     58159 TG----------------TGTTT-AGAGTCAG-----------TAA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31310 18 +     63561 TG----------------TGTTT-AGAGTCAG-----------TAA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31070 18 +     51148 TG----------------TGTTT-AGAGTCAG-----------TAA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556040 18 -   4542175 TG----------------TGTTT-AGAGTCAG-----------TAA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31054 18 +     51125 TG----------------TGTTT-AGAGTCAG-----------TAA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4213 18 -      8168 TT----------------TATTT-AGAGTAAA-----------TGA
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7454 18 +     39866 TG----------------TGTTT-AGAGTAAG-----------TAA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2538 18 -      9282 TG----------------TGTTT-AGAGTAAG-----------TAA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41942 18 -     87950 TG----------------TGTTT-AGAGTAAG-----------TAA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42336 18 -     88961 TG----------------TGTTT-AGAGTAAG-----------TAA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7034 18 -     39403 TG----------------TGTTT-AGAGTAAG-----------TAA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          41985 18 +     87928 TG----------------TGTTT-AGAGTAAG-----------TAA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7031 18 -     60166 TG----------------TGTTT-AGAGTAAG-----------TAA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13968 18 -     67232 TG----------------TGTTT-AGAGTAAG-----------TAA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41884 18 -     90634 TG----------------TGTTT-AGAGTAAG-----------TAA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43351 18 +     89403 TG----------------TGTTT-AGAGTAAG-----------TAA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177273 18 - 189387572 TG----------------TGTTT-AGAATAAG-----------TAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192090 18 -   9816681 TG----------------TGTTT-AGAATAAG-----------TAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26886 18 +     69807 TG----------------GGTTC-AGAGTAAG-----------TAA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44072 18 -     80239 TG----------------GGTTC-AGAGTAAG-----------TAA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2745 18 +      3019 CT----------------CATTT-AGAGGAAC-----------AGA
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981935 16 +   4620579 TT----------------TATT---GAGTCAA-----------TGA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565440 16 -   2598838 TT----------------TATT---GAGTCAA-----------TGA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3078 16 -      7103 TT----------------TATT---GAGTCAA-----------TGA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3675 16 -     11706 TT----------------TATT---GAGTCAA-----------TGA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7413 16 -     30655 TT----------------TATT---GAGTCAA-----------TGA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33726 16 +     46564 TT----------------TATT---GAGTCAA-----------TGA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94005 16 -     98465 TT----------------TATT---GAGTCAA-----------TGA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7644 16 +     35169 TT----------------TATT---GAGTCAA-----------TGA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36784 18 +     52041 TT----------------TATTT-AGAGTAAA-----------TAG
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51499 18 -     66298 TT----------------TATTT-GGAGTAAA-----------TGA
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          3999 13 -     18639 T---------------------T-AGAATAAA-----------TAA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840193 18 -  28871421 TT----------------TGTTT-AGAGTAAA-----------TGA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536704 18 -   4952924 TT----------------TGTTT-AGAGTAAA-----------TGA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098452 18 +  38429054 TT----------------TATTT-AGAGTGAA-----------TAC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26260 18 +     91421 TG----------------GGTTC-AGAGTAAG-----------TAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152752 18 -   7812017 TG----------------GGTTC-AGAGTAAG-----------TAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7127 18 +     72585 TG----------------GGTTC-AGAGTAAG-----------TAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52525 18 +     55069 TT----------------TGTTT-GGAATAAA-----------TGA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022092 18 -  90668790 TT----------------TATTT-AGCTTAAG-----------TAG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914094 18 +   3329780 TT----------------TAtat-agaataaa-----------tga
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              826 29 +      7119 TG----------------GGTTC-AGAGTAAGTTCAGAGTAAGTAA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121434 29 + 195417433 TG----------------GGTTC-AGAGTAAGTTCAGAGTAAGTAA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235676 29 -   7961872 TG----------------GGTTC-AGAGTAAGTTCAGAGTAAGTAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74122 18 -    116970 TT----------------TATTT-AGAGTAAA-----------TGA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3339 18 +     27962 TG----------------TGTTT-AGAGTAAG-----------TAA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3234 18 +      6077 TG----------------TGTTT-AGAGTAAG-----------TAA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3324 18 +      5971 TG----------------TGTTT-AGAGTAAG-----------TAA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3246 18 +      5932 TG----------------TGTTT-AGAGTAAG-----------TAA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1588 18 -      4390 TG----------------TGTTT-AGAGTAAG-----------TAA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391024 18 - 209938924 TG----------------TGTTT-AGAGTAAG-----------TAA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3195 18 +      5979 TG----------------TGTTT-AGAGTAAG-----------TAA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3958 18 -      4301 TG----------------TGTTT-AGAGTAAG-----------TAA
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7196 18 +     16473 TT----------------TATTT-AAAATAAA-----------TGA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108361 18 + 121099817 TG----------------TGTTT-AGAGTAAG-----------TAA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29928 18 -     47369 TG----------------TGTTT-AGAGTAAG-----------TAA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30314 18 -     79414 TG----------------TGTTT-AGAGTAAG-----------TAA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27005 18 -     34454 TG----------------TGTTT-AGAGTAAG-----------TAA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14408 18 -     22428 TG----------------TGTTT-AGAGTAAG-----------TAA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29560 18 -     47109 TG----------------TGTTT-AGAGTAAG-----------TAA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237618 18 +   5703754 CG----------------TGTTT-GGAGTAAG-----------TAA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7208 18 +     21866 CG----------------TGTTT-GGAGTAAG-----------TAA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115285  9 +    313613 AT----------------AGAGT-A----A----------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24579 18 +     27374 TG----------------GGTTC-AGTGTAAG-----------TAA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28093 18 +     58920 TG----------------GGTTC-AGTGTAAG-----------TAA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14589 18 -     45317 TG----------------GGTTC-AGTGTAAG-----------TAA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22248 18 -     42441 TG----------------GGTTC-AGTGTAAG-----------TAA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24926 18 -     29113 TG----------------GGTTC-AGTGTAAG-----------TAA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28000 18 -     48123 TG----------------GGTTC-AGTGTAAG-----------TAA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48560 18 +     77746 TT----------------TCTTT-AGAGTAAA-----------CAG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857628 17 -   1910179 TT----------------TGTTT-AGTTTAT------------GGA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670707  6 +  18376816 --------------------TTA-CAT-------------------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867719 18 +   3870691 TT----------------TATTT-AGAGTAAA-----------TGA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              5985 18 -     97271 TT----------------CATTT-AGAGTAAA-----------TAA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124227 18 +    196729 TT----------------TATAT-AAAGTGAA-----------TAC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643123 18 +  69701581 TC----------------TATTT-AGAGTAAA-----------TGA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390517 18 +   1523678 TG----------------TGTTT-AGAGTAAG-----------TAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13463 18 +     22964 TT----------------TATTT-AGAGTAAA-----------TGA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2043 18 +      5583 TT----------------AATTT-AGAGTACC-----------CGA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190963 18 +    199430 TT----------------TGTTT-AGAGTAAA-----------TGA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104934 18 -    539355 TT----------------TGTTT-AGAGTAAA-----------TGA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6210 18 +      6850 TT----------------TATTT-ACAGCAAA-----------TAG
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6285 18 +     20590 tt----------------tattt-acagcaaA-----------TAG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352473 18 - 186847797 TG----------------GGTTC-ACAGTAAG-----------TAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19139 18 -     31044 TT----------------TACTT-GGAGTACC-----------CAA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479492 18 -    610378 TT----------------TATTT-AGAGTAAA-----------TGA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20125 18 +     26378 TG----------------GGTTC-AGTGTAAG-----------TAA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32803 18 -     78344 TG----------------GGTTC-AGTGTAAG-----------TAA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19450 18 +     25722 TG----------------GGTTC-AGTGTAAG-----------TAA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27755 18 -     62838 TG----------------GGTTC-AGTGTAAG-----------TAA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27801 18 +     46913 TG----------------GGTTC-AGTGTAAG-----------TAA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8608 18 -     28527 TG----------------GGTTC-AGTGTAAG-----------TAA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29692 18 -     64340 TG----------------GGTTC-AGTGTAAG-----------TAA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27729 18 -     63452 TG----------------GGTTC-AGTGTAAG-----------TAA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9174 18 +     22490 TG----------------GGTTC-AGTGTAAG-----------TAA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2600 18 -      6147 TG----------------GGTTC-AGTGTAAG-----------TAA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9505 18 -     13050 TG----------------GGTTC-AGTGTAAG-----------TAA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254745 18 -   6242583 TG----------------GGTTC-AGTGTAAG-----------TAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         769 18 +     19340 TG----------------GGTTC-AGTGTAAG-----------TAA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172806 18 -    200418 TA----------------CATTT-AGAATAAA-----------TGG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479770 18 -  10818551 TT----------------TATTT-AGAGTAAC-----------CAG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833479 18 -   4065304 TT----------------TATTT-AGAGTAAA-----------CAA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7498 18 -     70247 TT----------------TATTT-AGAGTAAA-----------CAA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361024 18 -  33153633 TT----------------TATTT-AGAGTAAA-----------TGA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3010 13 -     21056 TT----------------AGAGT-A----AA------------TGA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181167 18 +   5085361 TT----------------TATTT-AGAGTAAA-----------TAA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24577 16 -     30710 TT----------------TATT---GAGTCAA-----------TGA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23484 16 -    147434 TT----------------TATT---GAGTCAA-----------TGA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75649 18 +   5488506 TT----------------TATTT-ATAGTAAA-----------CGA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104307 18 -    112863 TT----------------TATTT-AGAATAAA-----------TAA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173509 18 -    224448 TT----------------TATTT-AGAGTAAA-----------TGA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28200 18 -     86975 TT----------------TATTT-AGAGTAAA-----------TAA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       531 18 -       753 TG----------------TATTT-AGAGTAAA-----------TGA
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             432 18 +      1812 TT----------------TATTT-AGAGTAAA-----------TGA
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4824 20 +     36723 AATGAG--TC-GGATTAGTGC--------------T-T
s Acinonyx_jubatus.LLWD01001279.1                           812213 21 +   1699592 AATGAG--TTTGGATTAATGG--------------T-T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24470 20 +     63021 AGTGAG--TG-TGTTAAGTGA--------------T-T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414672 21 +  29979442 aatgag--tctGGAGTAATGG--------------T-T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            214983 21 +    347723 AATGAG--TCTGGAGTAGTGA--------------T-T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17434 20 -     61208 AATGTA--TG-GGGTTAATGA--------------T-T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47140 20 +     53615 AATGAG--TC-AGATTAGTAG--------------T-T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43101 20 +     44087 AATGAG--TC-GGATTAGTAG--------------T-T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15726 20 -     21945 AATGAG--TC-GGATTAGTAG--------------T-T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17409 20 +     32033 AATGAG--TC-GGATTAGTAG--------------T-T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71575 20 -     84148 AATGAG--TC-GAATTAGTAG--------------T-T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43814 20 -     78289 AATGAG--TC-GAATTAGTAG--------------T-T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43253 20 +     55831 AATGAG--TC-GAATTAGTAG--------------T-T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41703 20 -     64179 AATGAG--TC-GAATTAGTAG--------------T-T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23337 20 -     24835 AATGAG--TT-GAATTAGTAG--------------T-T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40328 20 +     45454 AATGAG--TC-GAATTAGTAC--------------T-T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45974 20 +     70886 AATGAG--TC-GAATTAGTAG--------------T-T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8150 20 +     30854 AATGAG--TC-GAATTAGTAG--------------T-T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32284 20 +     42133 AATGAG--TC-GAATTAGTAG--------------T-T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584738  1 +   2318259 C-------------------------------------
i Ammotragus_lervia.NIVO01071767.1                       I 77 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176472 21 -    412891 AGTGAA--TCTGGACTAATGA--------------T-T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49776 21 -     68529 TATGAG--TCTGGATTAATGA--------------T-T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     529 20 +     17741 AATGAG--TC-AAATTAATAG--------------T-T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1154 20 -     15923 AATGAG--TC-AAATTAATAG--------------T-T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1429 20 -     16391 AATGAG--TC-AAATTAATAG--------------T-T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                                989 20 -     17186 AATGAG--TC-AAATTAATAG--------------T-T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15375 18 -     32367 --TGAG--TC-AGATTAATGA--------------T-T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18898 20 -     45910 AATGAG--TG-GGATTAACGA--------------T-T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4744 21 -     15198 AGTGAA--TCTGGACTAATAA--------------T-T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274037 20 +  21539123 AATGAG--TC-GAATTAATAG--------------T-T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10204 20 +     48076 AATGAG--TC-GAATTAATAG--------------T-T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5341 20 -     28759 AATGAG--TC-GAATTAATAG--------------T-T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32894 20 +     44353 AATGAG--TC-GAATTAATAG--------------T-T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48264 20 -     71267 AATGAG--TC-GAATTAATAG--------------T-T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22323 20 -     33135 AATGAG--TC-GAATTAATAG--------------T-T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5560 20 +     11645 AATGAG--AG-GGATTAATGA--------------T-T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5568 20 -     19611 AATGAG--AG-GGATTAATGA--------------T-T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956570 21 -  23207421 AATGAG--TCTGGATTAATGA--------------T-T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3779 21 -      4711 AATGAG--TCTGGATTAATGA--------------T-T
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85670 21 +    124022 CATGAG--TCTGGATTAATGA--------------T-T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21202 21 +    288883 tatgaG--TCTGGATTAATGA--------------T-T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355588 21 +  48749331 tatgag--TCTGGATTAATGA--------------T-T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754156 21 +   1948126 tatgag--TCTGGATTAATGA--------------T-T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544295 21 -  45695690 tatgag--TCTGGATTAATGA--------------T-T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529320 21 -   4408762 tatgag--TCTGGATTAATGA--------------T-T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7211 20 +     28062 AATGAG--TC-GAATTAATAG--------------T-T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42505 20 -     91139 AATGAG--TC-GAATTAATAG--------------T-T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20031 20 +     95584 AATGAG--TC-GAATTAATAG--------------T-T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19944 20 +    119600 AATGAG--TC-GAATTAATAG--------------T-T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9511 20 +     18648 AAGGAG--TC-TAATTAATAG--------------T-T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9050 20 -     13885 AAGGGG--TC-GAGTTAATAG--------------T-T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1116 20 -      8861 AAGGAG--TC-GAATTAATAA--------------T-T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453509 20 + 189096842 AAGGAG--TC-GAATTAATAG--------------T-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1031 20 +      8664 AAGGAG--TC-GAATTAATAG--------------T-T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630333 21 +  17673402 AATGAA--TTTGGATTAAGGA--------------T-T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664619 21 +   7040546 AATGAA--TTTGGATTAAGGA--------------T-T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208279 21 +   1652518 AATGAA--TTTGGATTAAGGA--------------T-T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504694 21 +  60362399 CATGAG--TCTGGCATAATGG--------------T-T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8330 21 -     23171 CATGAG--TCTGGCATAATGG--------------T-T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221673 21 +   9314153 CATGAG--TCTGGCATAATGG--------------T-T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614808 21 +  59632846 CATGAG--TCTGGCATAATGG--------------T-T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106389 21 -  63665305 CATGAG--TCTGGCATAATGG--------------T-T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408468  1 -  46296322 C-------------------------------------
i Capra_aegagrus.CM003241.1                              I 77 C 0
s Capra_hircus.CM004588.1                                 26590741  1 +  44709034 C-------------------------------------
i Capra_hircus.CM004588.1                                I 77 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    909 20 -      1880 AATGAG--TT-GAATTAATGA--------------T-T
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269592 20 +    496798 ATTTAA--TT-GGATTAAGGA--------------T-T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                690 21 -      1021 AGCGAA--TCTGGACTAATGA--------------T-T
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27011 20 -     39886 AAAGAA--TG-GGATTAATGA--------------T-T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78874 21 -    217609 AATCAG--TCTGGTTTAACGA--------------T-T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 15
s Cavia_aperea.AVPZ01000300.1                              4995735 20 +  23392119 AATGAN--NN-NNNNNAATGA--------------G-T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999177 20 +  23407841 AATGAG--TT-GAATTAATGA--------------G-T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62258 20 -     66877 AATGAG--TT-GAATTAATGA--------------G-T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4429 20 -     12580 AAGGAG--TC-TAATTAATAG--------------T-T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42487 20 +     53515 AAGGAG--TC-TAATTAATGG--------------T-T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370418 20 -  26074798 AATGAG--TC-GAATTACTAG--------------T-C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7307 20 -     34880 AATGAG--TC-GAATTACTAG--------------T-C
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66402 20 -     89041 AATGAG--TC-GAATTACTAG--------------T-C
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1552 20 -      5494 attTAA--TT-GGACTAAGGA--------------T-T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491505 21 -  27778364 AATGAG--TCTGTATTAGTGA--------------T-T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18338 21 +     27315 AATGAG--TCTGTATTAGTGA--------------T-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140323 20 -   4669795 AATGAG--TT-GGATTAGTGG--------------T-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44065 20 +     47900 AATGAG--TT-GGATTAGTGG--------------T-T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          43890 20 -     44860 AATGAG--TC-GGATTAGTGG--------------T-T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          43878 20 -    148725 AATGAG--TC-GGATTAGTGG--------------T-T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26055 20 -     40656 AATGAG--TC-GGATTAGTAG--------------T-T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6021 20 +     20796 AATGAG--TC-GGATTAGTAG--------------T-T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11138 20 -     17524 AATGAG--TC-GGATTAGTAG--------------T-T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26860 20 -     34525 AATGAG--TC-GGATTAGTAG--------------T-T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10641 20 -     25376 AATGAG--TT-GGATTAGTAG--------------T-T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363237 20 -  39242232 AATGAG--TT-GGATTAGTAG--------------T-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268953 20 +  21565898 AATGAG--TC-GGATTAGTAG--------------T-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31327 20 -     45857 AATGAG--TC-GGATTAGTAG--------------T-T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26226 20 -     32606 AATGAG--TT-GGATTAGTAG--------------T-T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2385 20 +      8499 AATGAG--TC-GGATTAGTAG--------------T-T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24783 20 +     70610 AATGAG--TC-GGATTAGTAG--------------T-T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21752 20 +     36323 AATGAG--TC-GGATTAGTAG--------------T-T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12124 19 -     19938 AGTGAG--TCTGGCTCGGCGC-----------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29935 20 -     33796 AATGAG--AA-GGATTAATGA--------------T-T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4452 20 -     15404 AATGAG--AA-GGATTAATGA--------------T-T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8304 20 -     32913 AATGAG--TC-GAATTAATAG--------------T-T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18717 20 -     40346 AATGAG--TC-GAATTAATAG--------------T-T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18972 20 +    216457 AATGAG--TC-GAATTAATAG--------------T-T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18765 20 +     39636 AATGAG--TC-GAATTAATAG--------------T-T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238209 13 -   2543920 ---------T-TAATTAGTGA--------------T-T
i Chinchilla_lanigera.JH722012.1                         I 4 C 0
s Chiropotes_albinasus.k141_1946120                           3359 20 +      5346 AAGGAG--TC-GAATTAATAG--------------T-T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41842 20 -    112038 AATGAG--TC-GAATTAATAG--------------T-T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7413 20 +     34062 AATGAG--TC-GAATTAATAG--------------T-T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342643 20 +  18827391 AATGAG--TC-GGATTAGTAG--------------T-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9190 20 -     44032 AATGAG--TC-GGATTAGTAG--------------T-T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303967 20 - 135778131 AATGAG--TC-GGATTAGTAG--------------T-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14110 21 +     15858 AATGAG--TCTGGATCAGTGC--------------T-T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605686 21 -    839153 AATGAG--TCTGGATCAGTGC--------------T-T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                109 21 +      2406 AATCAG--TCTGGATTAATGC--------------T-T
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             408396 20 -   2368649 AATGAG--TC-GGATTAGTGG--------------T-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378272 20 - 200372422 AATGAG--TC-GGATTAGTGG--------------T-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1821 20 -     84244 AATGAG--TC-GGATTAGTGG--------------T-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806590  7 +  53390261 ----------------NNNNN--------------N-N
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2103 21 -      8242 AATGAG--TCTGGACTAATGA--------------T-T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43605 20 -     83289 AATGAA--TG-TGTTGAATGA--------------T-T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114175 20 - 224834208 AATGAG--TG-TGTTGCATGA--------------C-T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6756 35 +     12657 AATAAG--CCTGGATTAGTGTTAAATGAAATTAGCC-T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3662 21 +     87169 AATGAG--TTTGGATTAACTG--------------C-T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644323 20 -   1526836 AGTGAG--TC-AGATCTCTAA--------------T-T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17701 20 +     50838 AGTGAT--TT-GAATTGATTA--------------T-T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3656 20 +     36344 AATGAG--TT-GAATTAATGA--------------T-C
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27434 20 +     75252 AATGAG--TT-GAATTAATGA--------------T-T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109475 21 -   2246927 AATGAG--CCTGGCTCGGTGC--------------C-T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291873 20 +  12879189 AATGAG--TG-GAATTAATGA--------------T-T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625102 21 -  35494412 AATGGG--TCTGGATTAATGA--------------T-T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11864493 21 -  20541912 AGTGAA--TCTGGACTAACGA--------------T-T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663792 19 -   1390856 AAT--G--TCTGTATTAGTGA--------------T-T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138582 21 -    198055 AATGAG--TCTGTATTAGTGA--------------T-T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98207 13 -    115145 ---------C-GAATTAGTGA--------------T-T
i Dinomys_branickii.DinBra_scaffold_10381                I 4 C 0
s Dipodomys_ordii.KN672350.1                              18949797 20 -  37912305 GAAGAG--TG-GGATTGATGA--------------T-T
i Dipodomys_ordii.KN672350.1                             C 0 I 8
s Dipodomys_stephensi.DipSte_scaffold_89095                   4732 20 -     10735 GAAGAG--TG-GGCTTGATGA--------------T-T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9688 20 +     14636 AATGAG--TT-GAATTAATGA--------------T-T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62854433 18 - 111700974 GA-ACA--CCAGGATTA--AC--------------T-G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5571 21 +     19438 AATGAG--TCTAGACTAATGA--------------T-T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239034 21 -    607251 tATGAG--TCTGGATTAATGA--------------T-T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108055 17 -  10337057 AATATG--TCTGAAT----AT--------------G-A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30328 20 +    110024 AATGAG--TG-TGTTGCATGA--------------C-T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12309 20 +     18970 AATGAG--TG-TGTTGCATGA--------------C-T
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 17
s Enhydra_lutris.KZ291758.1                               24915409 21 +  41312741 aatgag--tctggAGTAGTGG--------------T-T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578206 21 +  14770903 AATGAG--TCTGGACTAATGA--------------T-T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040665 21 -   4378816 AATGAG--TCTGGATTAACGA--------------T-T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374603 21 +  39960074 AATGAG--TCTGGATTAGCGA--------------T-T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411391 16 -    498745 AATGAG--TCTGGATTAA--------------------
i Equus_przewalskii.KK951119.1                           C 0 I 96
s Erinaceus_europaeus.JH835339.1                           3665414 13 +   7059049 AATGGG--TCTAGAT-----------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 2
s Erythrocebus_patas.Contig38                               262170 20 +  21539334 AATGAG--TC-GGATTAGTGG--------------T-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64442 21 -    133382 AATGAG--TCTGGATTAATGA--------------T-T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4661 21 +      7672 AATGAG--TCTGGATTAATGA--------------T-T
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14078 20 -     24895 AATGAG--AG-GGATTAATGA--------------T-T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41787 20 -     70999 AATGAG--AG-GGATTAATGA--------------T-T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85749 20 +    112731 AATGAG--AG-GGATTAATGA--------------T-T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42318 20 +     68309 AATGAG--AG-GGATTAATGA--------------T-T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52644 20 -     65740 AATGAG--AG-GGATTAATGA--------------T-T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23273 20 -     75513 AATGAG--AG-GGATTAATGA--------------T-T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47470 20 -     97555 AATGAG--AG-GGATTAATGA--------------T-T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4195 20 +     30972 AATGAG--AG-GGATTAATGA--------------T-T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41915 20 -     52037 AATGAG--AG-GGATTAATGA--------------T-T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58317 20 -    111500 AATGAG--AG-GGATTAATGA--------------T-T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246122 21 - 206538554 AATGAG--TTTGGATTAATGG--------------C-T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115908 21 - 205367284 AATGAG--TTTGGATTAATGG--------------C-T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27005 21 -     30238 AATGAG--TTTGGATTAATGG--------------C-T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124316 20 -    137831 AATGAG--TA-GGATTAACGA--------------T-T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7861 20 +     22493 AATGAG--TA-GGATTAACGA--------------T-T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19938 20 -     32986 AATGAG--TG-GGATTAACGA--------------T-T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 475 20 -     28519 AATGAG--TG-GGATTAATGA--------------T-T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90740 21 -     95226 TATGAG--TCTGGATTAATGA--------------T-T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33808 20 -     36801 AATGAG--TC-AGATTAATTA--------------T-T
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5124 20 -      8343 AATGAG--TC-GGATTAGTGC--------------T-T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254138 20 - 186649187 AATGAG--TC-GGATTAGTGC--------------T-T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1299 20 -     78134 AATGAG--TC-GGATTAATGA--------------T-T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14003 20 -     40692 AATGAG--AG-GGATTAATGA--------------T-T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35405 20 +     49394 AATGAG--AG-GGATTAATGA--------------T-T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60273 20 -     66874 AATGAG--AG-GGATTAATGA--------------T-T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9147 20 -     42923 AATGAG--AG-GGATTAATGA--------------T-T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16147 20 -     53142 AATGAG--AG-GGATTAATGA--------------T-T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30091 21 -    327341 AATGAG--TTTGGATTAACTG--------------C-T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8498  1 +     48891 C-------------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1931691 20 -  22651954 aatgac--tt-gaaTTAATGA--------------T-T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6384 21 +      6687 GATGAG--TCTGGATTTGTGC--------------T-T
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6937 21 -     36432 AATGAG--TCTGGATTAATGA--------------T-T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553458 22 -   1711038 aatgag--ccTGGGCTAATGA--------------TTT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                371 24 -      2730 AATGAGCGCCTGGGCTAATGA--------------TTT
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142146 20 -    630532 AATGAG--TC-GGATGAGTGC--------------T-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69004 21 +     83186 CATGAC--TTTGGGTTAACCG--------------C-T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71178 20 +    143317 AATGAG--TT-GCATTAATGA--------------T-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5181 20 +     12352 AACGAG--TC-GGATGAGTGC--------------T-T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12365 20 +     55766 AACGAG--TC-GGATGAGTGC--------------T-T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051963 20 + 191637585 AACAAG--TC-GGATGAGTGC--------------T-T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800841 20 +  11177569 AACAAG--TC-GGATGAGTGC--------------T-T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3797 19 -    135385 AATGAG--T--GAATTAATGA--------------T-T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386158 20 +   7955117 AATGAG--TC-GGATTAATGA--------------T-T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1707 20 +     11955 AATGAG--AG-GGATTAATGA--------------T-T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2911 21 -     16823 AATGAG--TCTGGGTTAATGA--------------T-T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65161 21 -     97402 AATGAG--TCTGGCTTAATGA--------------T-T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42581 20 +    110728 AATGAG--TC-GAATTAATAG--------------T-T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62235 14 -     65777 AAGGAG--TCTGG-------A--------------T-T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 51
s Lemur_catta.scaffold_24                                 14758796 20 +  30322482 AATGAG--AG-GGATTAATGA--------------T-T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3494 20 -     13097 AAGGAG--TC-GAATTAATAG--------------T-T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3248 20 +      5940 AAGGAG--TC-GAATTAATAG--------------T-T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3078 20 -      5717 AAGGAG--TC-GAATTAATAG--------------T-T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9454 20 -     11567 AATGAG--TC-GAATTAATAG--------------T-T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10835 20 -     12945 AATGAG--TC-GAATTAATAG--------------T-C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8310 20 +     29618 AATGAG--AG-GGATTAATGA--------------T-T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8306 20 +     31569 AATGAG--AG-GGATTAATGA--------------T-T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8317 20 +     24756 AATGAG--AG-GGATTAGTGA--------------T-T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8316 20 +     16388 AATGAG--AG-GGATTAATGA--------------T-T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812824 21 -   3914936 AATTAG--TCTGGAGTAATGG--------------T-T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17145 20 +     24238 AATTAG--TT-CAATTAATGA--------------T-T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 43
s Lipotes_vexillifer.KE559953.1                             334447 21 +    662738 AATGAG--TCTGGATTAATGA--------------T-T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333208 20 -   1826925 AATGAG--TC-GGATTAGTGG--------------T-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                            9897 20 +     19643 AATGAG--TG-GGATTAACGA--------------T-T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043560 20 -   6120653 AATGAG--TG-GGATTAACGA--------------T-T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080329 21 +  43346337 AATGAG--TCTGGATTAGTGT--------------T-T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613963 21 +  59628241 CATGAG--TCTGGCATAATGG--------------T-T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44592 20 -     61512 AATAAG--TC-CGATTAGTGG--------------T-T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372254 20 -  60120075 AATAAG--TC-CGATTAGTGG--------------T-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24517 20 +     30207 AATAAG--TC-CGATTAGTGG--------------T-T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21620 20 -     24934 AATAAG--TC-CGATTAGTGG--------------T-T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24470 20 +     30527 AATAAG--TC-CGATTAGTGG--------------T-T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35646 20 -     50087 AATAAG--TC-CGATTAGTGG--------------T-T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45390 20 +     51645 AATAAG--TC-CGATTAGTGG--------------T-T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414592 20 - 187317192 AATAAG--TC-CGATTAGTGG--------------T-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398823 20 +  25927173 AATAAG--TC-CGATTAGTGG--------------T-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  47995 20 -     62418 AATAAG--TC-CGATTAGTGG--------------T-T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  533 20 +     14901 AATAAG--TC-CGATTAGTGG--------------T-T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44467 20 +     59329 AATAAG--TC-CGATTAGTGG--------------T-T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270375 20 +    668171 AATAAG--TC-CGATTAGTGG--------------T-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  651 20 +      1732 AATAAG--TC-CGATTAGTGG--------------T-T
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2173 20 +     17132 AATAAG--TC-CGATTAGTGG--------------T-T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222522 21 -    270270 AGTGAG--TCTAGACTAATGA--------------T-T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321672 20 +  24302211 AATGAG--TC-GGATTAGTGG--------------T-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356504 20 -    752769 AATGAG--TC-GGATTAGTGG--------------T-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             672877 19 -    737560 AAT--G--TCTGGTTTAATGA--------------T-T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220165 19 +    317179 AAT--G--TCTGGTTTAATGA--------------T-T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500378 20 +  40650429 AATGAG--TC-GGATTAATGA--------------T-T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149719 21 +    207569 AATGAG--TCTGGACTAATGA--------------T-T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25513 21 -     74585 AATGAG--TCTGGAGTAGTGG--------------T-T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49461 20 -    140813 AATGAG--TG-TGTTGAATGA--------------T-T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428555 20 +  29670104 AGTGAG--TG-TGTTGCATAA--------------C-T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80746 21 +     93471 AATGAG--TCTGGATTAATGA--------------T-T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9620 20 +     17804 AAGGAG--TC-TAATTAATAG--------------T-T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10122 20 -     12984 AAGGAG--TC-TAATTAATAG--------------T-T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18436 20 -     26561 AAGGAG--TC-TAATTAATAG--------------T-T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983918 20 +  93316391 AATGAG--AA-GGATTAATGA--------------T-T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45464 20 +    145209 AA-CAG--TCCGCATTAGTAC--------------T-G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184438 21 +    200668 AGTGAA--TCCGGACTAATGA--------------T-T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961760 20 +  27267610 AATGAG--TG-TGTTGCATGA--------------C-T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362564 21 -   8254450 AATGAG--TCTGGACTAATGA--------------T-T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41471 21 -     48117 AATGAG--TCTGGACTAATGA--------------T-T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21680 20 -     27822 AATGAG--TC-GGATTAGTAG--------------T-T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7831 21 +     27589 AATTAG--TCTGGAGTAATGG--------------T-T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51715 20 -     62432 AATGAG--AA-GGATTAATGA--------------T-T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352845 21 +    437263 AATGAG--TCTGGATTAATGA--------------T-T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178606 21 +    366855 AGTCAG--TCCAGATTAATGA--------------T-T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24859 21 -     82753 TATGAG--TCTGGATGAATGA--------------T-G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17843 21 -     63510 AATGAG--TTTGGATTAACTG--------------C-T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38532 21 +     47283 aataag--tctggactaatgc--------------c-t
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592491 20 + 120012414 AATGAG--TG-TGTTGAATGA--------------T-C
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686876 20 + 129401213 AATGAA--TG-TGTTGAATGA--------------T-C
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216743 20 +  89631738 AATGAG--TG-TGCTGAATGA--------------T-C
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39496172 20 + 130317789 AATGAA--TG-TGTTGAATGA--------------T-C
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82637 20 -     86153 AATGAG--TC-GGATTAATGA--------------T-T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354441 21 +  14710649 aatgag--tctggAGTAGTGG--------------T-T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     62489 20 +     67721 AATTCA--TT-GAATTAATGA--------------T-T
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9792818 21 +  10118263 AATGAG--TCTGGACTAATGA--------------T-T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386948 21 +   6019432 AATGAG--TCTGGACTAATAA--------------T-T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382775 21 +   4330536 AATGAG--TCTGGACTAATGA--------------T-T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1587 21 +     18357 AATGAG--TCTGGACTAATGA--------------T-T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119071 21 +    130748 AATTAG--TCTGGATGAACGC--------------T-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945622 20 +   3037898 AGTGAG--TG-TGATTTCTGA--------------T-T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28321 20 +     34575 AATGAG--TC-GGATTAGTGG--------------T-T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468426 21 -  31847680 AATTAG--TCTGGAATAATGG--------------T-T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1227015 21 -   7148211 AATGAG--TCTGGATTAATGA--------------T-T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127555 21 -    149072 AGTGAT--TCTGGACTAATGA--------------T-T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53074 20 -    132029 AATGAG--TC-GGATGAGTGC--------------T-T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9169 20 -     16345 AATGAG--TC-GGATGAGTGC--------------T-T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15054 20 +     22201 AATGAG--TC-GGATGAGTGC--------------T-T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413275 20 -  22158432 AATGAG--TC-GGATGAGTGC--------------T-T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25452 20 -     54323 AATGAG--TC-GGATGAGTGC--------------T-T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197556 21 +   9404916 CATGAG--TCTGGCATAATGG--------------T-T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635917 20 + 196305487 AATGAG--TG-GGATTAACAA--------------T-T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2671 20 -      3937 AATGAG--TG-GGATTAACAA--------------T-T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564176 20 - 199412804 AATGAG--TG-GGATTAACAA--------------T-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550509 20 -   3988456 AACGAG--TT-GAATTTGAGA--------------T-T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11054457 18 -  11899542 AGTGAG--C---Cattaatta--------------t-t
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451023 21 +   2017862 AATTAG--TCTGGTGTAGTGG--------------T-T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435624 21 -    630418 TATGAG--TCTGGATTAATGA--------------T-T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13624 21 +    150152 TATGAG--TCTGGATTAATGA--------------T-T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92117 20 -    140218 AATGAG--TG-TGTTGCGTGA--------------C-T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    2997 20 -     41509 AATGAG--TG-TGTTGCATGA--------------C-T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096297 21 +  10937097 AATGAG--TCTTTATTAATGA--------------T-T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13175 21 -     14239 AATGAG--TTTGGATTACTGC--------------T-T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107102982 20 - 174332312 AATGAG--TT-CACTTAATGA--------------T-T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38603 21 +    559221 CATGAG--TCTGGCATAATGG--------------T-T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39477 20 -     51505 AATGAG--TA-GGATTAACGA--------------T-T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352480 20 +   1103335 AATGAG--TA-GGATTAACGA--------------T-T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403618  1 -  44047080 c-------------------------------------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4137  1 +     17875 C-------------------------------------
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472167 20 - 189151597 AATGAG--TC-GGATTAGTGC--------------T-T
i Pan_troglodytes.CM009242.2                             I 18 I 311
s Panthera_onca.PanOnc_flattened_line_3271                   23830 21 -    230217 AATGAG--TTTGGATTAATGG--------------C-T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461156 21 -  18783137 AATGAG--TTTGGATTAATGG--------------C-T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971815 21 +   8748460 AATGAG--TTTGGATTAATGG--------------C-T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615056 21 +   2937107 caggaG--TCTGGATTAATGA--------------T-T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242505 20 - 183742232 AATGAG--TC-GGATTAGTGG--------------T-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             8967 20 +     21308 AATGAG--TT-GGATTAGTGG--------------T-T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291541 20 -  20919399 AATGAG--TC-GGATTAGTGG--------------T-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21615 20 -     27687 AATGAG--TC-GGATTAGTGG--------------T-T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14761 20 +     16796 AATGAG--TC-GGATTAGTGG--------------T-T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21572 20 -     23640 AATGAG--TC-GGATTAGTGG--------------T-T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14433 21 +     78924 AATGAA--TTTGGATTAATGG--------------C-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 16
s Perodicticus_ibeanus.k141_1921260                          25685 20 +     31479 AATGAG--TG-GGATTAACAA--------------T-T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18054 20 -     24908 AATGAG--TG-GGATTAACAA--------------T-T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1127 20 +      9367 GAAGAG--TG-GGATGGATGA--------------T-T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246195 20 +  18517816 AATGAG--TG-TGTTGCCTGA--------------C-T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31301 20 -     56120 AATGAC--TT-GAATTACCGA--------------T-T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12141 21 -     15039 AATGAG--TCTGGATTAATGA--------------T-T
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            1779 20 +     55023 AATGAG--TC-GGATTAGTGG--------------T-T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1329 20 -     89929 AATGAG--TC-GGATTAGTGG--------------T-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1918 20 +     40849 AATGAG--TC-GGATTAGTGG--------------T-T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253582 20 +  14605196 AATGAG--TC-GGATTAGTGG--------------T-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3121 21 +     22231 AATGAG--TATGGACTGATGA--------------T-T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64216 20 +    207309 AATGAG--TC-GAATGGATAG--------------T-T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5309 20 -     25401 AATGAG--TC-GAATGAATAG--------------T-T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31052 20 +     58159 AATGAG--TC-GAATGGATAG--------------T-T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31328 20 +     63561 AATGAG--TC-GAATGGATAG--------------T-T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31088 20 +     51148 AATGAG--TC-GAATGGATAG--------------T-T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556058 20 -   4542175 AATGAG--TC-GAATGAATAG--------------T-T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31072 20 +     51125 AATGAG--TC-GAATGGATAG--------------T-T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4231 21 -      8168 AATGTG--TCTGGATTAATGA--------------T-T
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7472 20 +     39866 AATGAG--TC-GAATTGATAG--------------T-T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2556 20 -      9282 AATGAG--TC-GAATTGATAG--------------T-T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41960 20 -     87950 AATGAG--TC-GAATTGATAG--------------T-T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42354 20 -     88961 AATGAG--TC-GAATTGATAG--------------T-T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7052 20 -     39403 AATGAG--TC-GAATTGATAG--------------T-T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42003 20 +     87928 AATGAG--TC-GAATTGATAG--------------T-T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7049 20 -     60166 AATGAG--TC-GAATTGATAG--------------T-T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      13986 20 -     67232 AATGAG--TC-GAATTGATAG--------------T-T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41902 20 -     90634 AATGAG--TC-GAATTGATAG--------------T-T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43369 20 +     89403 AATGAG--TC-GAATTGATAG--------------T-T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177291 20 - 189387572 AATGAG--TC-GGATTAGTGC--------------T-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192108 20 -   9816681 AATGAG--TC-GGATTAGTGC--------------T-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26904 20 +     69807 AACGAG--TC-GGATTAGTGG--------------T-T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44090 20 -     80239 AACGAG--TC-GGATTAGTGG--------------T-T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2763 21 +      3019 GATGAG--TCTGGATTTGTGC--------------T-T
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1981951 20 +   4620579 AATGAG--AG-GGATTAATGA--------------T-T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565456 20 -   2598838 AATGAG--AG-GGATTAATGA--------------T-T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3094 20 -      7103 AATGAG--AG-GGATTAATGA--------------T-T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3691 20 -     11706 AATGAG--AG-GGATTAATGA--------------T-T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7429 20 -     30655 AATGAG--AG-GGATTAATGA--------------T-T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33742 20 +     46564 AATGAG--AG-GGATTAATGA--------------T-T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94021 20 -     98465 AATGAG--AG-GGATTAATGA--------------T-T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7660 20 +     35169 AATGAG--AG-GGATTAATGA--------------T-T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36802 20 +     52041 AATGAG--TG-TGTTGAATGA--------------T-T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51517 21 -     66298 AATGAG--TCTGGACTAATGA--------------T-T
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4012 21 -     18639 AATGAG--TCTGGAGTAGTGG--------------T-T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840211 21 -  28871421 AATGAG--TCTGGACTAATGA--------------T-T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536722 21 -   4952924 AATGAG--TCTGGACTAATGA--------------T-T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098470 21 +  38429054 AGTGAG--TTTGGATTAATGG--------------C-T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26278 20 +     91421 AATGAG--TC-AGATTAGTGG--------------T-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152770 20 -   7812017 AATGAG--TC-GGATTAGTGG--------------T-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7145 20 +     72585 AATGAG--TC-GGATTAGTGG--------------T-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52543 21 +     55069 TGTGAG--TCTGGATTAATGA--------------T-T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022110 20 -  90668790 AATGAG--TG-TATTGAATGA--------------T-T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914112 22 +   3329780 aatgag--tttAGACTAATGA--------------TTT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                              855 20 +      7119 AATGAG--TC-GGATTAGTGG--------------T-T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121463 20 + 195417433 AATGAG--TC-GGATTAGTGG--------------T-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235705 20 -   7961872 AATGAG--TC-GGATTAGTGG--------------T-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74140 21 -    116970 AATGAG--TCTGGGCTAATGA--------------T-T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3357 20 +     27962 AAGGAG--TC-GAATTAATAG--------------T-T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3252 20 +      6077 AAGGAG--TC-GAATTAATAA--------------T-T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3342 20 +      5971 AAGGAG--TC-GAATTAATAG--------------T-T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3264 20 +      5932 AAGGAG--TC-GAATTAATAG--------------T-T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1606 20 -      4390 AAGGAG--TC-GAATTAATAG--------------T-T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391042 20 - 209938924 AAGGAG--TC-GAATTAATAG--------------T-T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3213 20 +      5979 AAGGAG--TC-GAATTAATAG--------------T-T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3976 20 -      4301 AAGGAG--TC-GAATTAATAG--------------T-T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7214 21 +     16473 TATGAG--TCTGGATTAATGA--------------T-T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108379 20 + 121099817 AATGAG--TC-GGACTAATCG--------------T-T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29946 20 -     47369 AATGAG--TC-GGACTAATCG--------------T-T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30332 20 -     79414 AATGAG--TC-GGACTAATCG--------------T-T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27023 20 -     34454 AATGAG--TC-GGACTAATCG--------------T-T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14426 20 -     22428 AATGAG--TC-GGACTAATCG--------------T-T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29578 20 -     47109 AATGAG--TC-GGACTAATCG--------------T-T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237636 20 +   5703754 AATGAG--TC-GAATTACTAG--------------T-C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7226 20 +     21866 AATGAG--TC-GAATTACTAG--------------T-C
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115294  7 +    313613 ----------------AATGA--------------T-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24597 20 +     27374 AATGAG--TC-GGATTAGTGG--------------T-T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28111 20 +     58920 AATGAG--TC-GGATTAGTGG--------------T-T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14607 20 -     45317 AATGAG--TC-GGATTAGTGG--------------T-T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22266 20 -     42441 AATGAG--TC-GGATTAGTGG--------------T-T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24944 20 -     29113 AATGAG--TC-GGATTAGTGG--------------T-T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28018 20 -     48123 AATGAG--TC-GGATTAGTGG--------------T-T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48578 20 +     77746 AATAAA--TG-TGTTGCATGA--------------C-T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857645 21 -   1910179 AATGGC--TCTGAATTAATCA--------------T-T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670713 21 +  18376816 AAAGag--tctgttttaaata--------------t-t
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867737 20 +   3870691 AATGAG--TC-GGATTAATGA--------------T-T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6003 21 -     97271 AATGAG--TCTGGAGTAGTGG--------------T-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124245 21 +    196729 AATGAG--TTTGGATTAACTG--------------C-T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643141 21 +  69701581 AATCAG--TCTGGATTAATGA--------------T-T
i Sus_scrofa.CM000828.4                                  C 0 I 15
s Symphalangus_syndactylus.tarseq_199                       390535 20 +   1523678 AATGAG--TC-GGGTGAGTGC--------------T-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13481 21 +     22964 AATGAG--TCTGGACTAATGA--------------T-T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2061 21 +      5583 AATGAG--TCTGGATGAACGC--------------T-T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      190981 21 +    199430 AATTAA--TCTGGATTAATGA--------------T-T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104952 21 -    539355 AATGAA--TCTGGATTCATGA--------------T-T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6228 20 +      6850 AATTAA--TT-GGACTAAGGA--------------T-T
i Tarsius_lariang.k141_1780720                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6303 20 +     20590 AATTAA--TT-GGACTAAGGA--------------T-T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352491 20 - 186847797 AATGAG--TC-GGATTAGTGG--------------T-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19157 21 -     31044 AATGAG--TCTGGCTCAGCGC--------------T-T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 10
s Tonatia_saurophila.TonSau_scaffold_294                    479510 21 -    610378 AGTGAA--TCTGGACTAATGA--------------T-T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20143 20 +     26378 AATGAG--TC-GGATTAGTGG--------------T-T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32821 20 -     78344 AATGAG--TC-GGATTAGTGG--------------T-T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19468 20 +     25722 AATGAG--TC-GGATTAGTGG--------------T-T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27773 20 -     62838 AATGAG--TC-GGATTAGTGG--------------T-T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27819 20 +     46913 AATGAG--TC-GGATTAGTGG--------------T-T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8626 20 -     28527 AATGAG--TC-GGATTAGTGG--------------T-T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29710 20 -     64340 AATGAG--TC-GGATTAGTGG--------------T-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27747 20 -     63452 AATGAG--TC-GGATTAGTGG--------------T-T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9192 20 +     22490 AATGAG--TC-GGATTAGTGG--------------T-T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2618 20 -      6147 AATGAG--TC-GGATTAGTGG--------------T-T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9523 20 -     13050 AATGAG--TC-GGATTAGTGG--------------T-T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254763 20 -   6242583 AATGAG--TC-GGATTAGTGG--------------T-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         787 20 +     19340 AATGAG--TC-GGATTAGTGG--------------T-T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172824 21 -    200418 TATAAG--TCTGGATTAATGA--------------T-T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479788 21 -  10818551 AATGAG--TCTGGATGAATGC--------------T-T
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833497 20 -   4065304 AATGAG--TC-AGATTAGCGA--------------T-T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7516 20 -     70247 AATGAG--TC-AGATTAGTGA--------------T-T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361042 21 -  33153633 AATGAG--TCTTTATTAATGA--------------T-T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3023 21 -     21056 AATGAG--CCTGGATTAATAC--------------T-T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181185 21 +   5085361 AATGAG--TCTGGAGTAATGG--------------T-T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24593 20 -     30710 AATGAG--AG-GGATTAATGA--------------T-T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23500 20 -    147434 AATGAG--AG-GGATTAATGA--------------T-T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75667 21 +   5488506 AATGAA--TTTGGATTAAGGA--------------T-T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104325 21 -    112863 CATGAG--TCTGGCATAATGG--------------T-T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173527 20 -    224448 AATGAG--TC-AGATTAATGA--------------T-T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28218 21 -     86975 AATTAG--TCTGGAGTAGTGG--------------T-T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_533409                       549 20 -       753 AATGTT--TG-GGGTTAATGA--------------T-T
i Zapus_hudsonius.ZapHud_scaffold_533409                 C 0 N 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             450 21 +      1812 AATGAG--TCTGGATTAATGA--------------T-T
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Jaculus_jaculus.JH725527.1                               1238935 412 +   9596543 I
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4844 45 +     36723 TCCA-TTGT-GAT-------GAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------GG---GAGGA----T
s Acinonyx_jubatus.LLWD01001279.1                           812234 45 +   1699592 TACA-TGGT-GAT-------CAC------T-CC-ATTTG----TGT-GGGG----AG-CC-AATT------AG---GAGGA----T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24490 45 +     63021 GGTG-TGGG-GAA-------CAT------T-TC-ATTTC----TGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414693 46 +  29979442 TACG-TGGT-GAT-------CAC------T-CCCATTTG----TTT-TGGG----AG-CC-AATT------AG---AAGAA----T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215004 45 +    347723 TACA-TGAT-GAT-------cac------t-tt-gtttg----ttt-tggg----ag-CC-AATT------AA---AAGGA----T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17454 45 -     61208 GGCA-TAGG-GAT-------CAC------T-CC-ATTTG----TTC-TGGA----AG-CC-ACTT------AG---GAGGA----A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 24
s Allenopithecus_nigroviridis.k141_3755588                   47160 45 +     53615 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43121 45 +     44087 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15746 45 -     21945 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17429 45 +     32033 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AC---GAGGA----T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71595 46 -     84148 TCCA-TTGT-GAC-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--GAGG---AG---GAGGA----T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43834 46 -     78289 TCCA-TTGT-GAC-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--GAGG---AG---GAGGA----T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43273 46 +     55831 TCCA-TTGT-GAC-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--GAGG---AG---GAGGA----T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41723 46 -     64179 TCCA-TTGT-GAC-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--GAGG---AG---GAGGA----T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23357 46 -     24835 TCCA-TTGT-GAC-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--GAGG---AG---GAGGA----T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40348 46 +     45454 TCCA-TTGT-GAC-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--GAGG---AG---GAGGA----T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              45994 49 +     70886 TCCA-TTGT-GAC-------CAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--GAGGAGGAG---GAGGA----T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8170 46 +     30854 TCCA-TTGT-GAC-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--GAGG---AG---GAGGA----T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32304 46 +     42133 TCCA-TTGT-GAC-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--GAGG---AG---GAGGA----T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176493 44 -    412891 TGTG-TGGT-AAT-------CAC------T-CC-ATTGG----TGC-TGGG----AG-CC-AATT------AG---A-AAG----T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             49797 42 -     68529 TGCA-TGGT-GAT-------CAC------T-CC-ACTTG----TAT-TGAG----AG-CC-AATC------AG---G---A----T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     549 43 +     17741 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-C-CA--G------AG---GAGGG----T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1174 43 -     15923 TCCA-TCGT-GAT-------GGC------C-TC-ATTTG----TGC-TGGG----AG-C-CA--G------AG---GAGGG----T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_trivirgatus.k141_318729                               1449 43 -     16391 TCCA-TCAT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1009 43 -     17186 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-C-CA--G------AG---GAGGG----T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15393 45 -     32367 TGCA-TGGC-GAT-------CGC------C-CC-ATTTA----TGT-TGGG----AG-CC-ACTT------AG---GAGGA----G
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       18918 49 -     45910 TGTG-TGGT-GAT-------TAC------T-TC-ATTTG----TGT-TGGGAGTCAG-CC-ACAT------AG---GAGGA----T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4765 44 -     15198 TGTG-TGGT-GAT-------CAC------T-CT-GTTTG----TGG-TGGG----AG-CC-AATG------AG---A-AGG----T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274057 43 +  21539123 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGA----T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10224 43 +     48076 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGA----T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5361 43 -     28759 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGA----T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32914 43 +     44353 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGA----T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48284 43 -     71267 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGA----T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22343 43 -     33135 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGA----T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5580 49 +     11645 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCATGC-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5588 49 -     19611 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGC-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956591 45 -  23207421 TGCT-TGGT-GAT-------CAC------T-CC-ACTTG----TGT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 53
s Balaenoptera_bonaerensis.DF507193.1                         3800 45 -      4711 TGCT-TGGT-GAT-------CAC------T-CC-ACTTG----TGT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Balaenoptera_bonaerensis.DF507193.1                    C 0 I 53
s Beatragus_hunteri.BeaHun_scaffold_7278                     85691 42 +    124022 TGCC-TGGT-GAT-------CAC------T-CC-ACTTG----TAT-TGAG----AG-CC-AATT------AA---G---A----T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21223 42 +    288883 TGCA-TGGT-GAT-------CAC------T-CC-ACTTG----TAT-TGAG----AG-CC-AGTT------AG---G---A----T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355609 42 +  48749331 TGCA-TGGT-GAT-------CAC------T-CC-ACTTG----TAT-TGAG----AG-CC-AGTT------AG---G---A----T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754177 42 +   1948126 TGCA-TGGT-GAT-------CAC------T-CC-ACTTG----TAT-TGAG----AG-CC-AGTT------AG---G---A----T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544316 42 -  45695690 TGCA-TGGT-GAT-------CAC------T-CC-ACTTG----TAT-TGAG----AG-CC-AGTT------AG---G---A----T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529341 42 -   4408762 TGCA-TGGT-GAT-------CAC------T-CC-ACTTG----TAT-TGAG----AG-GC-AGTT------AG---G---A----T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7231 43 +     28062 TCCA-TCCT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42525 43 -     91139 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GTGGG----T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20051 43 +     95584 TCCA-TCCT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         19964 43 +    119600 TCCA-TCCT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9531 43 +     18648 TCCA-TCAT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9070 43 -     13885 TCCG-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1136 43 -      8861 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453529 43 + 189096842 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1051 43 +      8664 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630354 45 +  17673402 TGCG-TGAT-GAT-------CAC------T-CC-ACTTG----GTT-TAGA----AG-CC-AATT------AG---CAGGA----T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664640 45 +   7040546 TGCG-TGAT-GAT-------CAC------T-CC-ACTTG----GTT-TAGA----AG-CC-AATT------AG---CAGGA----T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208300 45 +   1652518 TGCG-TGAT-GAT-------CAC------T-CC-ACTTG----GTT-TAGA----AG-CC-AATT------AG---CAGGA----T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504715 45 +  60362399 TACA-TGAT-GAT-------CAC------T-CC-CTTTG----TGT-TGGG----AA-CT-AATT------AG---AAGTA----T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8351 45 -     23171 TACA-TGAT-GAT-------CAC------T-CC-CTTTG----TGT-TGGG----AA-CT-AATT------AG---AAGTA----T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221694 45 +   9314153 TACA-TGAT-GAT-------CAC------T-CC-CTTTG----TGT-TGGG----AA-CT-AATT------AG---AAGTA----T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614829 45 +  59632846 TACA-TGAT-GAT-------CAC------T-CC-CTTTG----TGT-TGGG----AA-CT-AATT------AG---AAGTA----T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106410 45 -  63665305 TACA-TGAT-GAT-------CAC------T-CC-CTTTG----TGT-TGGG----AA-CT-AATT------AG---AAGTA----T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                    929 28 -      1880 TTCA-TGGT-CAT-------CAC------T-CC-ATTTG----CAC-TAG------------------------------------
i Capromys_pilorides.CapPil_scaffold_652123              C 0 I 59
s Carlito_syrichta.NW_007259797.1                           269612 45 +    496798 TCCA-TGTT-GAT-------TAT------T-CC-ATTTG----TGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Carlito_syrichta.NW_007259797.1                        C 0 I 68
s Carollia_perspicillata.CarPer_scaffold_668536                711 44 -      1021 TGTG-TGGT-GAT-------CAC------T-CC-ATTTG----TGG-TGGA----AG-CC-AATT------AG---A-AGG----T
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27031 45 -     39886 TGTA-TGGT-GAT-------CAC------T-CC-ACTTG----TGC-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78910 25 -    217609 -------------------------------------AA----TGT-TTGG----AG-CC-AATT------AG---GAGGA----T
i Catagonus_wagneri.CatWag_scaffold_2839                 I 15 C 0
s Cavia_aperea.AVPZ01000300.1                              4995755 33 +  23392119 TGCA-TGCT-CAT-------CCC------T-CC-ATTTG----TGC-TAGA----AG-GC--------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 8
s Cavia_porcellus.DS562891.1                               4999197 33 +  23407841 TGCA-TGCT-CAT-------CCC------T-CC-ATTTG----TGC-TAGG----AG-GC--------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 8
s Cavia_tschudii.CavTsc_scaffold_23560                       62278 33 -     66877 TGCA-TGCT-CAT-------CCC------T-CC-ATTTG----TGC-TAGG----AG-GC--------------------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 8
s Cebuella_niveiventris.k141_592277                           4449 43 -     12580 TCCA-TCAT-TAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42507 43 +     53515 TCCA-TCAT-TAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370438 42 -  26074798 TCCG-TCGT-GAT-------GAC------C-TC-ATTCG----TGC-TGGG----AG-C--A--G------AG---GAGGG----T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7327 42 -     34880 TCCG-TCGT-GAT-------GAC------C-TC-ATTCG----TGC-TGGG----AG-C--A--G------AG---GAGGG----T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66422 42 -     89041 TCCG-TCGT-GAT-------GAC------C-TC-ATTCG----TGC-TGGG----AG-C--A--G------AG---GAGGG----T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1572 45 -      5494 TCCA-TGTT-GAT-------TAT------T-CC-ATTTG----TGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Cephalopachus_bancanus.k141_1689090                    C 0 I 68
s Ceratotherium_simum.JH767749.1                          15491526 45 -  27778364 TGGG-TGGT-GAT-------CAC------T-CC-ATTTG----TAT-TGGG----AA-CT-GATT------AG---GAAGC----C
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18359 45 +     27315 TGGG-TGGT-GAT-------CAC------T-CC-ATTTG----TAT-TGGG----AA-CT-GATT------AG---GAAGC----C
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140343 45 -   4669795 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercocebus_atys.KQ010504.1                             C 0 I 32
s Cercocebus_chrysogaster.k141_1522556                       44085 45 +     47900 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercocebus_chrysogaster.k141_1522556                   C 0 I 32
s Cercocebus_lunulatus.k141_2779015                          43910 45 -     44860 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercocebus_lunulatus.k141_2779015                      C 0 I 32
s Cercocebus_torquatus.k141_2159127                          43898 45 -    148725 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercocebus_torquatus.k141_2159127                      C 0 I 32
s Cercopithecus_ascanius.k141_3120866                        26075 45 -     40656 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6041 45 +     20796 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11158 45 -     17524 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGT-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26880 45 -     34525 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10661 45 -     25376 TCCA-TCAT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363257 45 -  39242232 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  268973 45 +  21565898 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31347 45 -     45857 TCCA-TCAT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26246 45 -     32606 TCCA-TCGT-GGT-------GAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2405 45 +      8499 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24803 45 +     70610 TCCA-TCAT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21772 45 +     36323 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12143 34 -     19938 ------------T-------CAC------C-CC-GTTTG----CGC--GGG----AG-CC-AGGT------GG---GAGGA----C
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             29955 49 -     33796 TGCA-TGGT-GAT-------TAC------T-CC-GTCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4472 49 -     15404 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8324 43 -     32913 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------GG---GAGGG----T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18737 43 -     40346 TCCA-TTGT-GAT-------GAT------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------GG---GAGGG----T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             18992 43 +    216457 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------GG---GAGGG----T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18785 43 +     39636 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------GG---GAGGG----T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238222 25 -   2543920 TGCA-TGGT-CAT-------CCC------T-CC-ATTGG----GGC----------------------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 19
s Chiropotes_albinasus.k141_1946120                           3379 43 +      5346 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41862 43 -    112038 TCCA-TCGT-GAT-------GAC------C-TC-GTTTG----CGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7433 43 +     34062 TCCA-TCGT-GAT-------GAC------C-TC-GTTTG----CGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342663 45 +  18827391 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9210 45 -     44032 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            303987 45 - 135778131 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14131 45 +     15858 TGCA-TGGC-GAT-------GAC------T-CC-GTTTG----GGT-GGAG----AC-CT-AATT------AG---GAGGA----T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605707 45 -    839153 TGCA-TGGC-GAT-------GAC------T-CC-GTTTG----GGT-GGAG----AC-CT-AATT------AG---GAGGA----T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                130 45 +      2406 TGCA-CGGT-GAT-------CAC------T-CT-ACTTG----TTT-TGGA----AG-CC-AATT------AAGAGG---A----T
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             408416 45 -   2368649 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378292 45 - 200372422 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1841 45 -     84244 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806597 45 +  53390261 NNNN-NNNN-NNN-------NNN------N-NN-NNNNN----NNN-NNNN----NN-NN-NNNN------NN---NNNNN----N
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2124 45 -      8242 TCCG-TGGT-GAT-------CAC------T-CC-ATTTG----TAT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43625 45 -     83289 GGTG-TGGG-GAC-------CAC------T-TC-TTTTA----TGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114195 45 - 224834208 GGTA-TGGA-GAT-------TAC------T-TT-GTTTC----TGC-TGGG----AG-CC-TCTC------AG---GAGGT----T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6791 21 +     12657 TGAC-TAGT-GTT-------AAC------T-TT-ATTT------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3683 45 +     87169 TACA-CGGT-GAT-------CAC------T-CC-ATTTT----TGCAG-GG----AG-CC-AATT------AG---GAGGA----T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644343 45 -   1526836 TGCA-TGGT-GAC-------CCC------T-CT-GTTTG----TGC-TGGG----AG-CC-ACTT------AG---CAGGA----T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17721 28 +     50838 TGCA-TTTT-CAG-------CCC------T-AC-ATTTG----CAC-TAG------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 3
s Cuniculus_paca.CunPac_flattened_line_7025                   3676 33 +     36344 TGCA-TGGT-CAT-------CCC------T-CC-ATTTG----TGC-TAGG----AG-TC--------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 8
s Dasyprocta_punctata.DasPun_flattened_line_15900            27454 33 +     75252 CGCA-TGGT-CAT-------CCC------T-CC-ATTTG----CGC-TAGG----AG-TC--------------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 8
s Dasypus_novemcinctus.JH564415.1                          2109496 24 -   2246927 -------------------------------------TG----CGT--GGG----AG-CC-AGGT------AG---GAGGT----C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        291893 45 +  12879189 TGCA-TGGT-GAT-------TAC------T-CT-GTTCA----TGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625123 45 -  35494412 TGCG-TGGT-GAT-------CAC------T-CC-ACTTG----TGT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Delphinapterus_leucas.KZ290073.1                       C 0 I 53
s Desmodus_rotundus.KZ672289.1                            11864514 44 -  20541912 TGTG-TGGT-GGT-------CAC------T-CC-ATTTG----TGT-TGGG----AG-CC-AATG------AG---A-AGA----T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663811 45 -   1390856 TGGG-TGGT-GAT-------CAC------T-CC-ATTTG----TAT-TGGG----AA-CC-GATT------AG---GAAGC----C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138603 45 -    198055 TGGG-TGGT-GAT-------CAC------T-CC-ATTTG----TAT-TGGG----AA-CC-GATT------AG---GAAGC----C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98220 33 -    115145 TGCA-TGGT-AAT-------CCC------A-CC-ATGTG----TGC-TAGG----AG-TC--------------------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 7
s Dipodomys_ordii.KN672350.1                              18949825 33 -  37912305 ---------------------AC------T-GC-ATCTG----TAG-TGGG----AA-CT-TCTT------AG---GAGGA----T
i Dipodomys_ordii.KN672350.1                             I 8 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4752 45 -     10735 TGTA-TGGT-ACT-------CAC------T-GC-ATCTG----TAG-TGAG----AA-CT-ACTT------AG---GAGGA----T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9708 33 +     14636 TGCA-TGGT-CAT-------CCC------T-CC-GTTTG----CAC-TAGA----AG-GC--------------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 8
s Echinops_telfairi.JH980293.1                            62854451 45 - 111700974 TGCA-TGGT-GAT-------CAC------G-CC-ACTCG----TGT-TGGG----AG-CC-AATT------AGGAGG---A----G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5592 42 +     19438 TGCA-CAGT-GAT-------CAC------T-CC-ATTTG----TGT-TGGG----AG-TC-AATT------AA------GA----T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239055 42 -    607251 TGCA-TGGT-GAT-------CAC------T-CT-ACTTG----TAT-TGAG----AG-CC-AATT------AG---G---A----T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108072 45 -  10337057 TGCA-TAGG-GAT-------CAT------T-CA-ACTTG----TGC-TGGG----AG-CC-AATT------AGGAAG---A----T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30348 45 +    110024 GGTG-TGGG-AAT-------TAC------T-TC-ATTTC----TGC-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 63
s Ellobius_talpinus.LOJH01026522.1                           12346 13 +     18970 -----------------------------------------------------------C-ACTT------AG---GAGGA----T
i Ellobius_talpinus.LOJH01026522.1                       I 17 C 0
s Enhydra_lutris.KZ291758.1                               24915430 45 +  41312741 TACA-TGGT-GAT-------CAC------T-TC-ATTTG----TTT-TGGG----AG-CC-AATT------AA---AAGGA----T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578227 52 +  14770903 TGCG-TGGT-GATCACTGATCAC------G-CC-ATTTG----TGC-TGGG----AG-CC-AATT------AG---GAGGA----T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040686 45 -   4378816 TGGG-TGGT-GAT-------CAC------T-CC-GTTTG----TAT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374624 45 +  39960074 TGGG-TGGT-GAT-------CAC------T-CC-GTTTG----TAT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                               5 45 -      1194 TGGG-TGGT-GAT-------CAC------T-CC-GTTTG----TAT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Equus_przewalskii.ATBW01110277.1                       n 96 C 0
s Erinaceus_europaeus.JH835339.1                           3665429 45 +   7059049 TGTG-AGGC-AGT-------CAC------T-CC-GTTTT----TGT-TAGG----AA-CC-AATT------AG---GAGGA----T
i Erinaceus_europaeus.JH835339.1                         I 2 C 0
s Erythrocebus_patas.Contig38                               262190 45 +  21539334 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64463 45 -    133382 TGCG-TGGT-GAT-------CAC------T-CC-ACTTG----TGT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 53
s Eubalaena_japonica.EubJap_flattened_line_118172             4682 45 +      7672 TGCG-TGGT-GAT-------CAC------T-CC-ACTTG----TGT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 I 53
s Eulemur_albifrons.k141_51491                               14098 49 -     24895 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41807 49 -     70999 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85769 49 +    112731 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42338 49 +     68309 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCATGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52664 49 -     65740 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23293 49 -     75513 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCATGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47490 50 -     97555 TGCGTTAAT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4215 49 +     30972 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41935 49 -     52037 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58337 49 -    111500 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AC---GAGGA----T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246143 45 - 206538554 TACA-TGGT-GAT-------CAC------T-CC-ATTTG----TGT-GGGG----AG-CC-AATT------AG---GAGGA----T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115929 45 - 205367284 TACA-TGGT-GAT-------CAC------T-CC-ATTTG----TGT-GGGG----AG-CC-AATT------AG---GAGGA----T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27026 45 -     30238 TACA-TGGT-GAT-------CAC------T-CC-ATTTG----TGT-GGGG----AG-CC-AATT------AG---GAGGA----T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     124336 49 -    137831 TGTG-TGGC-GAT-------TAC------T-CC-ATTCC----TGT-TGGGAGTCAG-CC-ACTT------AG---GAGGA----C
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             7881 49 +     22493 TGTG-TGGC-GAT-------TAC------T-CC-ATTCC----TGT-TGGGAGTCAG-CC-ACTT------AG---GAGGA----C
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            19958 49 -     32986 TTTG-TGGT-GAT-------TAC------T-CC-ATTCC----TGT-TGGGAGTCAG-CC-ACTT------AG---GAGGA----C
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 495 45 -     28519 TGCA-TGGT-GAT-------CAC------T-CC-ATTTG----TGT-TGAG----AG-CC-ACTT------AT---GAGGA----T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90761 42 -     95226 TGCA-TGGT-GAT-------CAC------T-CC-ACTTG----TAT-TGAG----AG-CC-AATT------AG---G---A----T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33828 45 -     36801 TGCA-TGGT-GAT-------CGC------T-CC-ATTTG----TGT-TGGG----AG-CC-ACTT------AG---GGGGA----T
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5144 45 -      8343 TCCA-TCGT-GAT-------TGA------C-TC-ATCTG----TGC-TTGG----AG-CC-ACTT------GG---GAGGA----T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254158 45 - 186649187 TCCA-TCGT-GAT-------TGC------C-TC-ATCTG----TGC-TTGG----AG-CC-ACTT------GG---GAGGA----T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1319 45 -     78134 TGCA-TGGA-GAT-------CCC------T-CC-ATTTG----TGT-TGGG----AG-CC-ACTT------AG---GGGGA----T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14023 49 -     40692 TACA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35425 49 +     49394 TACA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60293 49 -     66874 TACA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9167 49 -     42923 TACA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16167 49 -     53142 TACA-TGGT-GAT-------TAC------T-CC-ATCCATCCATGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30112 45 -    327341 TACA-CGGT-GAT-------CAC------T-CC-ATTTG----TGCAG-GG----AG-AC-AATT------AG---GAGGA----T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1931711 39 -  22651954 TTCA-TGGT-CAT-------TGCTCCATCT-CC-ATTTG----CAC-TGGA----AG-CC--------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 12
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6405 45 +      6687 TGCA-TGGC-CAT-------CCC------T-TC-ACTGG----AGT-TGGG----AG-CT-GATG------AG---G---AGCG-T
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6958 45 -     36432 TGCG-TGGT-GAC-------CGC------T-CC-ACTTA----TGC-TGGG----AG-CC-AATT------AG---GAGGA----T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553480 45 -   1711038 TTCA-TGGT-GAT-------CGC------T-CC-ATTTG----TGT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 36
s Hipposideros_galeritus.HipGal_scaffold_164997                395 45 -      2730 TGCA-TGGT-GAT-------CAG------T-CC-ATTTG----TGT-TGGG----AG-CC-AATT------AG---GAAGA----T
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 36
s Hoolock_leuconedys.ctg274                                    142166 45 -    630532 TCCA-TCGT-GAT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------GG---GAGGA----T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69025 46 +     83186 TACA-TGGT-GAT-------CAC------T-CT-ATTTG----TGTGGGGG----AG-CC-AATT------AG---GAGGA----T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71198 33 +    143317 TGTA-TGGT-AAT-------CCC------T-CC-ATTTG----CGC-TAGG----AG-GC--------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 8
s Hylobates_agilis.k141_1155965                               5201 45 +     12352 TCCA-TCGT-GAT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------GG---GAGGA----T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12385 45 +     55766 TCCA-TCGT-GAT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------GG---GAGGA----T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2051983 45 + 191637585 TCCA-TCGT-GAT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------GG---GAGGA----T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800861 45 +  11177569 TCCA-TCGT-GAT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------GG---GAGGA----T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3816 45 -    135385 TGCA-TGGT-CAT-------CCC------T-CC-ATTTG----TGC-TAGG----AG-CT-GCTT------AG---AAAGA----T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386178 45 +   7955117 TGCA-CAGT-GAG-------CAC------T-CC-ATTTG----TGT-TGGG----AG-CC-ACTT------AG---GAGGC----G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1727 49 +     11955 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCATGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                2932 45 -     16823 TGCA-TGGT-GAT-------CAC------T-CC-ACTTG----TGT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 53
s Kogia_breviceps.KogBre_flattened_line_3970                 65182 45 -     97402 TGCA-TGGT-GAT-------CAC------T-CC-ACTTG----GGT-TGGG----AA-CC-AATT------AG---GAGGA----T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 53
s Lagothrix_lagothricha.k141_246028                          42601 43 +    110728 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    31526 51 -     49555 TGCA-TGGT-GATCA-T---CAC------A-CC-ATTGG----TGC-TGGAAG-AAG-CC-AATT------AG---GAAGA----T
i Lasiurus_borealis.LasBor_scaffold_26245                I 96 I 244
s Lemur_catta.scaffold_24                                 14758816 49 +  30322482 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCGCAT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3514 43 -     13097 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3268 43 +      5940 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3098 43 -      5717 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9474 43 -     11567 TCCA-TCGT-GAC-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------GG---GAGGG----T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10855 43 -     12945 TCCA-TCGT-GAC-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------GG---GAGGG----T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8330 49 +     29618 TGCA-TGGT-GAT-------TAC------T-CC-CTCCATCCATGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8326 49 +     31569 TGCA-TGGT-GAT-------TAC------T-CC-CTCCATCCATGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8337 49 +     24756 TGCA-TGGT-GAT-------TAC------T-CC-CTCCATCCATGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8336 49 +     16388 TGCA-TGGT-GAT-------TAC------T-CC-CTCCATCCATGT-TAGG----AG-CC-ACTT------AG---GAGGA----T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812845 45 -   3914936 TACA-TGGT-GAT-------CAC------T-CC-ATTTA----TTT-TGGG----AG-CC-AATT------AG---AAGGA----T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17208 42 +     24238 TTCA-TGGC-AAT-------CTC------T-CC-ATTTG----GAG-AAAA----AG-CC-ACTT------AG---GAG-------
i Lepus_americanus.LepAme_scaffold_56121                 I 43 C 0
s Lipotes_vexillifer.KE559953.1                             334468 45 +    662738 TGCG-TGGT-GAT-------CAC------T-CC-ACTTG----TGT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Lipotes_vexillifer.KE559953.1                          C 0 I 53
s Lophocebus_aterrimus.ctg367                               333228 45 -   1826925 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Lophocebus_aterrimus.ctg367                            C 0 I 32
s Loris_lydekkerianus.k141_2031736                            9917 49 +     19643 TGTG-TGGT-GAT-------TAC------T-CC-ATTCA----TCT-TGGGAGTCAG-CC-ACTT------AG---GAGGA----T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043580 49 -   6120653 TGTG-TGGT-GAT-------TAC------T-CC-ATTCA----TCT-TGGGAGTCAG-CC-ACTT------AG---GAGGA----T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080350 45 +  43346337 TGCA-CGGT-GAT-------CAC------T-CT-GCTTG----TGC-TGGG----AG-CC-AATT------AG---G---A-TGAT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41613984 45 +  59628241 TACA-TGAT-GAT-------CAC------T-CC-CTTTG----TGT-TGGG----AA-CT-AATT------AG---AAGTA----T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44612 45 -     61512 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372274 45 -  60120075 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24537 45 +     30207 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21640 45 -     24934 TCCA-TCAT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24490 45 +     30527 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35666 45 -     50087 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45410 45 +     51645 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414612 45 - 187317192 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398843 45 +  25927173 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48015 45 -     62418 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  553 45 +     14901 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44487 45 +     59329 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270395 45 +    668171 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  671 45 +      1732 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2193 45 +     17132 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222543 42 -    270270 TGCA-TAAT-GTT-------CAC------G-AC-ATTTA----TGT-TGGG----AG-TC-AATT------AA------GA----T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321692 45 +  24302211 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TTC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Mandrillus_leucophaeus.scaffold280                     C 0 I 32
s Mandrillus_sphinx.Contig270                               356524 45 -    752769 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TTC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Mandrillus_sphinx.Contig270                            C 0 I 32
s Manis_javanica.JSZB01003497.1                             672896 45 -    737560 TGCG-TGGT-GAG-------CAC------T-CC-ATTTG----TGT-TGGG----AG-CC-TTTT------AG---GGGGA----T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220184 45 +    317179 TGCG-TGGT-GAG-------CAC------T-CC-ATTTG----TGT-TGGG----AA-CC-TTTT------AG---GGGGA----T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500398 45 +  40650429 TGCA-CAGT-GAG-------CAC------T-CC-ATTTG----TGT-TGGG----CG-CC-ACTT------AG---GAGGC----G
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149740 45 +    207569 TGCA-TTGT-GAT-------CAC------T-TC-ATTTG----TTT-TGGG----AG-CC-AATT------AG---GAGAA----T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25534 45 -     74585 TACA-TGGT-GAT-------CAC------T-TC-ATTTG----TTT-TGGG----AG-CC-AATT------AA---AAGGA----T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49481 45 -    140813 GCTG-TGGG-CAG-------CAC------T-TC-ATTTC----TGC-TGGG----AT-CC-ACTT------AG---GAGGA----T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428575 45 +  29670104 GGTG-TGGA-GAT-------CAC------T-CC-GTTTC----TGC-TGGG----AG-CT-ACTC------AG---GAGGT----T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80767 45 +     93471 TGCG-TGGT-GAT-------CAC------T-CC-ACTTG----TGC-TGGG----AG-CC-AGTT------AG---GAGGA----T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 53
s Mico_argentatus.k141_582562                                 9640 43 +     17804 TCCA-TCAT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10142 43 -     12984 TCCA-TCAT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18456 43 -     26561 TCCA-TCAT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983938 49 +  93316391 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCATGT-TGGG----AG-CC-ACTT------AG---GGGAA----T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45484 45 +    145209 TGCA-TGGT-AAT-------CAC------T-CC-ACTTG----TGT-TGGG----AG-CC-AATT------AGGAGA---A----T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184459 44 +    200668 TGTG-TGAT-GAT-------CAC------T-CC-ATTTG----TGT-TGGG----AG-CC-AGTT------AG---A-AGT----T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15961780 45 +  27267610 GGTG-TGGG-AAT-------TAC------T-TC-ATTTC----TGC-TGGG----AG-TC-ACTT------AG---GAGGA----T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362585 45 -   8254450 TGCG-TGGT-GAT-------CAC------T-CC-ATTTG----TGT-TGGG----AG-CC-AATT------AG---GAAGA----T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41492 45 -     48117 TGCG-TGGT-GAT-------CAC------T-CC-ATTTG----TGT-TGGG----AG-CC-AATT------AG---GAAGA----T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21700 45 -     27822 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7852 45 +     27589 TACA-TGGT-GAT-------CAC------T-CC-ATTTA----TTT-TGGG----AG-CC-AATT------AG---AAGGA----T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51735 49 -     62432 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCATGT-TGGG----AG-CC-ACTT------AG---GGGAA----T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352866 45 +    437263 TGCG-TGGT-GAT-------CAC------T-CC-ACTTG----TGT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 53
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178627 45 +    366855 TGTG-TGGT-GAT-------CAC------T-CC-ATTTG----TGT-TGGG----AG-CC-AATT------AG---AAAGA----T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24880 42 -     82753 TGCA-TGGT-GAT-------CAC------T-CC-TCTTG----TAT-TGAG----AG-CC-AGTT------AG---G---A----T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17864 45 -     63510 TACA-CGGT-GAT-------CAC------T-CC-ATTTG----CGCAG-GG----AG-CC-AATT------AG---GAGGA----T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38553 45 +     47283 tgcc-tagt-gat-------cac------t-cc-atttg----tgt-tggg----AG-CC-AATT------AG---GAAGA----T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592511 45 + 120012414 AGTT-TGGG-GAC-------CAC------T-TC-ATTTC----TGC-TGGG----AG-CC-GAGT------AG---GAGGA----T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686896 45 + 129401213 AGTT-TGGG-GAC-------CAC------T-TC-ATTTC----TGC-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216763 45 +  89631738 GGTG-CGGG-GAC-------CAC------T-TC-ATTTC----TGC-TGGG----AG-CT-GCTT------AG---GAGGA----T
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39496192 45 + 130317789 AGTT-TGGG-GAC-------CAC------T-TC-ATTTC----TGC-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82657 45 -     86153 TGTA-TGGA-GAT-------CGC------T-CC-ATTTG----TGT-TGGG----AG-CC-ACTT------AG---GGGGA----T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354462 45 +  14710649 TACA-TGGT-GAT-------CAC------T-TC-ATTTG----TTT-TGGG----AG-CC-AATT------AA---AAGGA----T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     62509 28 +     67721 TTCA-TGGT-CAT-------CAT------C-CC-ATTTG----CAC-TAG------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 59
s Myotis_brandtii.KE162005.1                               9792839 45 +  10118263 TGCA-CGGT-GAT-------CAC------T-CC-ATTTA----TGT-TGGG----CG-CC-AATT------AG---GAAGA----T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4386969 45 +   6019432 TGCA-CGGT-GAT-------CAC------T-CC-ATTTG----TGT-TGGG----CA-CC-AATT------AG---GAAGA----T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382796 45 +   4330536 TGCA-CGGT-GAT-------CAC------T-CC-ATTTG----TGT-TGGG----CG-CC-AATT------AG---GAAGA----T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1608 45 +     18357 TGCA-CGGT-GAT-------CAC------T-CC-ATTTG----TGT-TGGG----AG-CC-AATT------AG---GAAGA----T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119092 45 +    130748 TGCC-TGGT-GAT-------CAC------T-CC-ATTTG----TGT-CAGG----AC-CC-AATT------AG---GAGGA----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945642 35 +   3037898 GG-A-AGGG-GCT-------CAC------T-CC-ATTTG----TGC-TCAG----AG-CC-ACT----------------------
i Nannospalax_galili.KL204047.1                          C 0 I 34
s Nasalis_larvatus.k141_1350636                              28341 45 +     34575 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468447 45 -  31847680 TACA-TGAT-GAT-------CAC------T-CC-ATTTA----TTT-TGGG----AG-CC-AATT------AG---AAGGA----T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1227036 45 -   7148211 TGCG-TGGT-GAT-------CAC------T-CC-ACTTG----TGT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 53
s Noctilio_leporinus.NocLep_scaffold_7894                   127576 44 -    149072 TATG-TGGG-GAT-------TAC------T-CC--TTTG----TGT-CAGG----AG-CC-AATT------AG---AAAGG----T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53094 45 -    132029 TCCA-TCGT-GAT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------GG---GAGGA----T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9189 45 -     16345 TCCA-TCGT-GAT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------GG---GAGGA----T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15074 45 +     22201 TCCA-TCGT-GAT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------GG---GAGGA----T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413295 45 -  22158432 TCCA-TCGT-GAT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------GG---GAGGA----T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25472 45 -     54323 TCCA-TCGT-GAT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------GG---GAGGA----T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197577 46 +   9404916 TACA-TGAT-GAT-------CAC------TCCC-CTTTG----TGT-TGGG----AA-CT-AATT------AG---AAGTA----T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635937 49 + 196305487 TGTG-TGGT-GAT-------TAC------T-CC-ATTCG----TGC-TGGGAGTCAG-CC-ACTT------TG---GAGGA----T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             2691 49 -      3937 TGTG-TGGT-GAT-------TAC------T-CC-ATTCG----TGC-TGGGAGTCAG-CC-ACTT------TG---GAGGA----T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564196 49 - 199412804 TGTG-TGGT-GAT-------TAC------T-CC-ATTCG----TGC-TGGGAGTCAG-CC-ACTT------TG---GAGGA----T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2550529 45 -   3988456 TGCA-TGGt-gat-------ctc------t-ct-ttttg----tgt-gAAG----GG-AC-ATTT------AG---GAGCA----G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11054475 28 -  11899542 tgca-tttt-cat-------ccC------T-AC-ATTTG----CAC-TAG------------------------------------
i Octodon_degus.JH651603.1                               C 0 I 3
s Odobenus_rosmarus.KB229312.1                             1451044 45 +   2017862 TACA-TGGT-GAT-------CAC------T-CC-ATTTA----TTT-TGGG----AG-CC-AATT------AG---AAGGA----T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435645 42 -    630418 TGCA-TGGT-GAT-------CAC------T-CT-ACTTG----TAT-TGAG----AG-CC-AGTT------AG---G---A----T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13645 42 +    150152 TGCA-TGGT-GAT-------CAC------T-CC-ACTTG----TAT-TGAG----AG-CC-AATT------AG---G---A----T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92137 45 -    140218 GGTG-TGGG-AAT-------TAC------T-TC-ATTTC----TGC-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3017 45 -     41509 GGTG-TGGG-AAT-------TGC------T-TC-ATTTC----TGC-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096318 45 +  10937097 TGCG-TGGT-GAT-------CAC------T-CC-ACTTG----TGT-CGGG----AG-CC-AATT------AG---GAGGA----T
i Orcinus_orca.KB316932.1                                C 0 I 53
s Orycteropus_afer.OryAfe_flattened_line_171931              13196 41 -     14239 TTCA-TGGT-AAT-------CAC------T-CC-AC-TG----TGT-TGGG----AG-CT-AATT------AG---G---A----T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103002 42 - 174332312 TTCA-TGGC-AAT-------CTC------T-CC-ATTTG----TAG-CAGA----AG-CC-ACCT------AG---GAA-------
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38624 45 +    559221 TACA-TGAT-GAT-------CAC------T-CC-CTTTG----TAT-TGGG----AA-AT-AATT------AG---AAGTA----T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39497 49 -     51505 TGTG-TGGC-GAT-------TAC------T-CC-ATTCC----TGT-TGGGAGTCAG-CC-ACTT------AG---GAGGT----T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352500 49 +   1103335 TGTG-TGGC-AAT-------TAC------T-CC-ATTCC----TGT-TGGGAGTCAG-CC-ACTT------AG---GAGGT----T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Pan_troglodytes.KZ622849.1                                 32870 45 -    110857 TCCA-TCGT-GAT-------TGC------C-TC-ATCTG----TGC-TTGG----AG-CC-ACTT------GG---GAGGA----T
i Pan_troglodytes.KZ622849.1                             I 20 I 695
s Panthera_onca.PanOnc_flattened_line_3271                   23851 45 -    230217 TACC-TGGC-GAT-------CAC------T-CC-ATTTG----TGT-GGGG----AG-CC-AATT------AG---GAGGA----T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461177 45 -  18783137 TACC-TGGC-GAT-------CAC------T-CC-ATTTG----TGT-GGGG----AG-CC-AATT------AG---GAGGA----T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971836 45 +   8748460 TACC-TGGT-GAT-------CAC------T-CC-ATTTG----TGT-GGGG----AG-CC-AATT------AG---GAGGA----T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615077 42 +   2937107 TGCA-TGGT-GAT-------CAC------T-CC-ACTTG----TAT-TAAG----AG-CC-AATT------AA---G---A----T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242525 45 - 183742232 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Papio_anubis.CM001495.2                                C 0 I 32
s Papio_cynocephalus.k141_1507553                             8987 45 +     21308 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Papio_cynocephalus.k141_1507553                        C 0 I 32
s Papio_hamadryas.Contig39                                  291561 45 -  20919399 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Papio_hamadryas.Contig39                               C 0 I 32
s Papio_kindae.k141_2214839                                  21635 45 -     27687 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Papio_kindae.k141_2214839                              C 0 I 32
s Papio_papio.k141_799093                                    14781 45 +     16796 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Papio_papio.k141_799093                                C 0 I 32
s Papio_ursinus.k141_2278143                                 21592 45 -     23640 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Papio_ursinus.k141_2278143                             C 0 I 32
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14470 20 +     78924 -----------------------------------------------GGGG----AG-CC-AATT------TG---AAGGA----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 16 C 0
s Perodicticus_ibeanus.k141_1921260                          25705 49 +     31479 TGTG-TGGT-GAT-------TAA------T-CC-ATTTG----TGT-TGGGAGTCAG-CC-ACAT------AG---GAGGA----T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18074 49 -     24908 TGTG-TGGT-GAT-------TAA------T-CC-ATTTG----TGT-TGGTAATCAG-CC-ACAT------AG---GAGGA----T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1147 45 +      9367 TGTG-TGGT-GCT-------CAC------T-CC-ATTTG----CAG-TGGG----GA-CT-ACTT------AG---GAAGA----T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246215 45 +  18517816 GGTG-TGGG-AAT-------TGC------T-TC-ATTTC----TGC-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31321 33 -     56120 TGCA-AGGT-CAT-------CCC------T-CC-CTTTG----CAC-TAGG----GG-CC--------------------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 12
s Phocoena_phocoena.PhoPho_flattened_line_46867              12162 45 -     15039 TGCG-TGGT-GAT-------CAC------T-CC-ACTTG----TGT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 I 53
s Piliocolobus_badius.k141_2704958                            1799 45 +     55023 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1349 45 -     89929 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1938 45 +     40849 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253602 45 +  14605196 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3142 45 +     22231 TGCG-TGGT-GAT-------CAC------A-CC-ATTTG----TGC-TGGG----AG-CC-AATT------AG---GAAGG----T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64236 42 +    207309 TCCA-TCGG-GAT-------GAC------C-TC-A-TTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5329 42 -     25401 TCCA-TCGG-GAT-------GAC------C-TC-A-TTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31072 42 +     58159 TCCA-TCGG-GAT-------GAC------C-TC-A-TTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31348 42 +     63561 TCCA-TCGG-GAT-------GAC------C-TC-A-TTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31108 42 +     51148 TCCA-TCGG-GAT-------GAC------C-TC-A-TTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556078 42 -   4542175 TCCA-TCGG-GAT-------GAC------C-TC-A-TTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31092 42 +     51125 TCCA-TCGG-GAT-------GAC------C-TC-A-TTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4252 45 -      8168 TGCT-TGGT-GAT-------CAC------T-CC-ACTTG----TGT-TAGG----AG-CC-AATT------AG---GAGGA----T
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 I 53
s Plecturocebus_bernhardi.k141_2549090                        7492 43 +     39866 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-CGGG----AG-CC-A--G------AG---GAGGG----T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2576 43 -      9282 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-CGGG----AG-CC-A--G------AG---GAGGG----T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       41980 43 -     87950 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-CGGG----AG-CC-A--G------AG---GAGGG----T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42374 43 -     88961 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7072 43 -     39403 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-CGGG----AG-CC-A--G------AG---GAGAG----T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42023 43 +     87928 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-CGGG----AG-CC-A--G------AG---GAGGG----T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7069 43 -     60166 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-CGGG----AG-CC-A--G------AG---GAGGG----T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14006 43 -     67232 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-CGGG----AG-CC-A--G------AG---GAGGG----T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41922 43 -     90634 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-CGGG----AG-CC-A--G------AG---GAGGG----T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43389 43 +     89403 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-CGGG----AG-CC-A--G------AG---GAGGG----T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177311 45 - 189387572 TCCA-TTGT-GAT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-TC-ACTT------GG---GAGGA----T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192128 45 -   9816681 TCCA-TTGT-GAT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-TC-ACTT------GG---GAGGA----T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26924 45 +     69807 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44110 45 -     80239 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_255930                 2784 45 +      3019 TGCA-TGGC-CAT-------CCC------T-TC-ACTGG----AGT-TGGG----AG-CT-GATG------AG---G---AGCG-T
i Procavia_capensis.ProCapCap_scaffold_255930            C 0 N 0
s Prolemur_simus.MPIZ01000396.1                            1981971 49 +   4620579 TACA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565476 49 -   2598838 TGCA-TGGT-GAT-------TAC------T-CC-ATCCGTCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3114 49 -      7103 TGCA-TGGT-GAT-------TAC------T-CC-ATCCGTCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3711 49 -     11706 TGCA-TAGT-GAT-------TAC------T-CC-ATCCGTCCATGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7449 49 -     30655 TGCA-TAGT-GAT-------TAC------T-CC-ATCCGTCCATGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33762 49 +     46564 TGCA-TGGT-GAT-------TAC------T-CC-ATCCGTCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94041 49 -     98465 TGCA-TGGT-GAT-------TAC------T-CC-ATCCGTCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7680 49 +     35169 TGCA-TGGT-GAT-------TAC------T-CC-ATCCGTCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36822 45 +     52041 GCTG-TGGG-GAG-------CAC------T-TC-ATTTC----TGC-TGGG----AT-CC-ACTT------AG---GAGGA----T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51538 45 -     66298 TATG-TGGT-GAT-------CAC------T-CC-ATTTG----TGT-TGGG----AG-CC-AATT------AG---AAAGA----G
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4033 45 -     18639 TACA-TGGT-GAT-------CAC------T-TC-ATTTG----TTT-TGGA----AG-CC-AATT------AA---AAGGA----T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840232 42 -  28871421 TGCA-CAGT-GAT-------CAC------T-CC-ATTTG----TGT-TGGG----AG-TC-AATT------AA------GA----G
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536743 42 -   4952924 TGCA-CAGT-GAT-------CAC------T-CC-ATTTG----TGT-TGGG----AG-TC-AATT------AA------GA----G
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098491 45 +  38429054 TACA-TGGT-GAT-------CAC------T-CC-ATTTG----TGT-GGGG----AG-CC-AATT------AG---GAGGA----T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26298 45 +     91421 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152790 45 -   7812017 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7165 45 +     72585 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52564 42 +     55069 TGCA-TGGT-GAT-------CAC------T-CT-ACTTG----TAT-TGAG----AG-CC-AATT------AG---G---A----T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022130 45 -  90668790 GGTC-TGGG-GAC-------CAC------T-TT-ATTGC----TGC-TGGG----AG-CC-ACTT------AG---GAGGA----C
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914134 45 +   3329780 TGCA-TGGT-GAT-------CAC------T-CC-ATTTG----TGT-TGGT----AG-CC-AATT------AA---GAGGA----T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 36
s Rhinopithecus_bieti.k119_778604                              875 45 +      7119 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121483 45 + 195417433 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235725 45 -   7961872 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74161 42 -    116970 TGCA-CAGT-GAT-------TAC------T-CC-ATTTG----TGT-GGGG----AG-TC-AATT------AA------GA----T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3377 43 +     27962 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3272 43 +      6077 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3362 43 +      5971 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3284 42 +      5932 TCCA-TC-T-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1626 42 -      4390 TCCA-TC-T-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391062 43 - 209938924 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3233 42 +      5979 TCCA-TC-T-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               3996 43 -      4301 TCCA-TCGT-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AGCC--A--G------AG---GAGGG----T
i Saguinus_oedipus.k141_1466288                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7235 42 +     16473 TGCA-TGGT-GAT-------CAC------T-CT-ACTTG----TAT-TGAA----AG-CC-AGTT------AG---G---A----T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108399 43 + 121099817 TCCA-TCGC-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       29966 43 -     47369 TCCA-TCGC-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30352 43 -     79414 TCCA-TCGC-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27043 43 -     34454 TCCA-TCGC-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14446 43 -     22428 TCCA-TCGC-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29598 43 -     47109 TCCA-TCGC-GAT-------GAC------C-TC-ATTTG----TGC-TGGG----AG-CC-A--G------AG---GAGGG----T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237656 42 +   5703754 TCCG-TCGT-GAT-------GAC------C-TC-ATTCG----TGC-TGGG----AG-C--A--G------AG---GAGGG----T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7246 42 +     21866 TCCG-TCGT-GAT-------GAC------C-TC-ATTCG----TGC-TGGG----AG-C--A--G------AG---GAGGG----T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115301 45 +    313613 TGCA-TGGT-GAT-------TAC------T-CC-TTTTG----TGT-TGGG----AA-CC-AATT------AG---GAAGA----T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 36
s Semnopithecus_entellus.k141_158471                         24617 45 +     27374 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28131 45 +     58920 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14627 45 -     45317 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22286 45 -     42441 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     24964 45 -     29113 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28038 45 -     48123 TCCA-TTGT-GGT-------TAC------T-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48598 45 +     77746 GGTG-TGGG-GAT-------TAC------T-TC-GTTTC----TGC-TGGG----AG-CC-ACTT------AG---GAGAA----T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857666 42 -   1910179 TGCG-CAGT-GAT-------CAC------T-TC-ATTTG----TAT-TGAG----AA-CC-AATC------AG---G---A----T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 17
s Sorex_araneus.JH798187.1                                 4670734 45 +  18376816 tgac-taGT-GAT-------CAT------T-CT-ATTTG----TGT-TGAG----AG-TA-AATT------AG---GAGCA----T
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867757 45 +   3870691 TGCA-CAGT-GAG-------CAC------T-CC-ATTTG----TGT-TGGG----CG-CC-ACTT------AG---GAGGC----G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6024 45 -     97271 TACA-TGGT-AAT-------CAC------T-TC-ATTTG----TTT-TGGG----AG-CC-AAtt------ag---aagga----t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 82
s Suricata_suricatta.SurSur_flattened_line_6629             124266 45 +    196729 TACA-TGGT-GAT-------CAC------T-CC-ATTTG----CGCAG-GG----AG-CC-AATT------AG---GAGGA----T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643177 25 +  69701581 -------------------------------------AA----TGT-TGGG----AG-CC-AATT------AT---GAGGA----T
i Sus_scrofa.CM000828.4                                  I 15 C 0
s Symphalangus_syndactylus.tarseq_199                       390555 45 +   1523678 TCCA-TCGT-GAT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-ACTT------GG---GAGGA----T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13502 40 +     22964 TG------T-CAT-------CAC------T-CC-ATTTG----TGT-TGGG----AA-CC-AATC------AG---GAAGA----T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2082 45 +      5583 TGCC-TGGT-GAT-------CAC------T-CC-ATTTG----TGT-CAGG----AC-CC-AATT------AG---GAGGA----T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191002 45 +    199430 TGGC-TGGT-GAT-------CAC------T-CC-ATTTC----TAT-TGGG----AA-CC-AATT------AG---GAGGA----T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    104973 44 -    539355 TGGG-TGGT-GAT-------CAC------T--C-ATTTC----TAT-TGGG----AA-CC-AATT------AG---GAGGA----T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6248 45 +      6850 TCCA-TGTT-GAT-------TAT------T-CC-ATTTG----TGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Tarsius_lariang.k141_1780720                           C 0 I 68
s Tarsius_wallacei.k141_226975                                6323 45 +     20590 TCCA-TGTT-GAT-------TAT------T-CC-ATTTG----TGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Tarsius_wallacei.k141_226975                           C 0 I 68
s Theropithecus_gelada.CM009954.1                           352511 45 - 186847797 TCCA-TCGT-GGT-------TAC------C-TC-AGTTG----TGC-TTGG----AG-CC-ACTT------AG---GAGGA----T
i Theropithecus_gelada.CM009954.1                        C 0 I 32
s Tolypeutes_matacus.TolMat_scaffold_31955                   19188 34 -     31044 ------------T-------CAC------C-CT-GTCCG----CGT--GGG----AG-CC-AGGT------AG---GAGGA----C
i Tolypeutes_matacus.TolMat_scaffold_31955               I 10 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479531 44 -    610378 TGTG-TGGT-GAT-------CAT------T-CC-ATTAG----TGT-TGGG----AG-CC-AATT------AG---A-AGG----T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20163 45 +     26378 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32841 45 -     78344 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19488 45 +     25722 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27793 45 -     62838 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27839 45 +     46913 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8646 45 -     28527 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29730 45 -     64340 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27767 45 -     63452 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9212 45 +     22490 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2638 45 -      6147 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9543 45 -     13050 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254783 45 -   6242583 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         807 45 +     19340 TCCA-TCGT-GGT-------TAC------C-TC-ATTTG----TGC-TTGG----AG-CC-CCTT------AG---GAGGA----T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172845 45 -    200418 TGGT-TGGT-GAT-------CAC------T-CC-ACTTG----TGT-TAAG----AG-GC-AAGT------AG---GAGGA----G
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479809 45 -  10818551 TGCA-TGGC-AAT-------CAC------T-CC-GCTTG----TGT-TGGG----AG-CC-AATT------AG---G---A-AGAT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833517 45 -   4065304 TGCA-TGGT-GAT-------CAC------T-CC-ATTTG----TGC-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7536 46 -     70247 TGCA-TGGT-GAT-------CAC------T-CC-ATTTG----TGCCTGGG----AG-CC-ACTT------AG---GAGGA----T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361063 45 -  33153633 TGCG-TGGT-GAT-------CAC------T-CC-ATTTG----TGT-TGGG----AG-CC-AATT------AG---GAGGA----T
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 53
s Uropsilus_gracilis.UroGra_scaffold_46687                    3044 41 -     21056 TG-----GT-GCT-------CAC------T-CT-CTTTG----TGT-TGGG----GA-TC-AATT------AG---GAGTA----T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181206 46 +   5085361 TACA-TGGT-GAT-------CAC------T-CCCATTTG----TTT-TGGG----AG-CC-AATT------AG---AAGGA----T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24613 49 -     30710 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23520 49 -    147434 TGCA-TGGT-GAT-------TAC------T-CC-ATCCATCCGTGT-TGGG----AG-CC-ACTT------AG---GAGGA----T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75688 45 +   5488506 TGCA-TGGT-GAT-------CAC------T-CC-ACTTG----GTT-TAGG----AG-CC-AATT------AG---CAGGA----T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104346 45 -    112863 TACA-TGAT-GAT-------CAC------T-CC-CTTTG----TGT-TGGG----AA-TT-AATT------AG---AAGTA----T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173547 45 -    224448 TGCA-CAGT-GAG-------CAC------T-CC-ATTTA----TGT-TGAG----TG-CC-ACTT------AG---GAGGC----A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28239 45 -     86975 TACA-TGGT-GAT-------CAC------T-CC-ATTTA----TTT-TGGG----AG-CC-AATT------AG---AAGGA----T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                        15 45 -       833 GGCA-TGGG-AAT-------TGC------T-CC-ATTTG----TTC-TGGG----AA-CC-ACTT------AG---GAGGA----A
i Zapus_hudsonius.ZapHud_scaffold_501999                 N 0 I 21
s Ziphius_cavirostris.ZipCav_flattened_line_572595             471 45 +      1812 TGCA-TGGT-GAT-------CAT------T-CC-ACTTG----TGT-TGGG----AG-CC-AGTT------AG---GAGGA----T
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 I 53
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Ovis_canadensis.OviCan_scaffold_67953                       4138  0 +     17875 C
e Ovis_aries.CM001607.2                                   26403619  0 -  44047080 C
e Jaculus_jaculus.JH725527.1                               1238935 412 +   9596543 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                  8499  0 +     48891 C
e Capra_hircus.CM004588.1                                 26590742  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27408469  0 -  46296322 C
e Aotus_nancymaae.KZ198451.1                                671588  0 +   5030052 C
e Ammotragus_lervia.NIVO01071767.1                         1584739  0 +   2318259 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       4889 163 +     36723 TC--TGTCA-GCTT-CAT-CC-CGG---CA----------CCG-ACTAGCACTGC---A-CA-G-C--GTAG-A-A-GGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGT--A---GA------GGGC-CC---AT----GCAAA-AC------------G-CTC--ATTA-TC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
s Acinonyx_jubatus.LLWD01001279.1                           812279 163 +   1699592 TC--TCTTG-GTGT-TTT-TCTTG----TA----------CCG-ACAAGCACCGG---A-CA-G-T--GGAGGG-A-AGCA------------TA-G-GA-C--TGGAA-A-GGTCA-----CATC-TT-CATG--TC-C-TGAAAGCTC-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGTC-CC---AT----GCGGA-AA------------G-ATC--GTTA-CC-TG-CT-GTGT--------C-----------tctt--g-ttt-t-caa-aat-tctt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24535 161 +     63021 TC--TATTG-GCAT-TTC-CATTG----TA----------CCC-A-CAGCAAGGC---A-CA-A-C--ACAG-A-A-GGCA------------CA-A-AG-C--T-AAA-A-GGTCA-----TGTC-TT-TGTT--TT-C-TGAAAGCCT-GAC--------TGT-T-TCC--TAAGTGC--A---GA------GGTC-CT---CA----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ACTT--------C-----------CCTC--G-TTT-T-AAA-TATGCCTT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414739 161 +  29979442 TC--TATAG-TTAT--TT-CCTTT----TA----------CCA-ACCAGTACTGC---A-CA-A-T--GGAG-G-A-ATCA------------CAAG-GA-C--TGGAA-A-CATCA-----CATT--T-TGTG--TT-C-TGAAAGCTT-GAG--------TGG-T-TTC--AAAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-TTGT--------c-----------tctt--g-ttt-t-caa-aat-tctt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215049 163 +    347723 TC--TATAG-GTGT-TTT-CCTTT----TG----------CCA-ACCAGCACTGC---A-CA-A-T--GGAG-G-A-AGCG------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAA--------TGA-T-TTC--AAAGTGT--A---GA------AGTC-CC---AG----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-GTGT--------C-----------tctt--g-ttt-t-caa-aat-tctt
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17523 138 -     61208 --------------------------------------------A-CAGTGCTGC---A-CA-A-G--ACAG-G-A-GGCA------------CAAG-GA-C--TGAA-AA-GGTCA-----TGTC-TT-TATT--TT-C-TGAAAGCTT-GAG--------TGG-T-TCC--AAAGTGC--A---GG------AGTC-CT---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGG--------C-----------TCTT--G-TTT-T-CAA-TAT-CCTT
i Allactaga_bullata.AllBul_scaffold_20030                I 24 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47205 163 +     53615 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCAGCACTGC---A-CA-G-C--ACGG-A-A-GGCA------------CAAG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43166 163 +     44087 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCAGCACTGC---A-CA-G-C--ACGG-A-A-GGCA------------CGAG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15791 163 -     21945 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCAGCACTGC---A-CA-G-C--ACGG-A-A-GGCA------------CGAG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17474 163 +     32033 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCAGCACTGC---A-CA-G-C--ACGG-A-A-GGCA------------CGAG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGACAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71641 163 -     84148 TC--TGTTG-GCGT-TAT-CCTTG----CA----------CCT-ACCGGCATCGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TGTG--CT-C-TGAAAGCTT-CAG--------TGG-T-TAT--AGAGTGC--G---GA------GGGC-CC---AT----GCAGA-AA------------C-CTC--GTTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               43880 163 -     78289 TC--TATTG-GCGT-TAT-CCTTG----CA----------CCT-ACCAGCATCGT---A-TA-G-C--ACAG-A-A-AGCC------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TGTG--CT-C-TGAAACCTT-CAG--------TGG-T-TAT--AGAGTGC--G---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43319 163 +     55831 TC--TGTTG-GCGT-TAT-GTTTG----CA----------CCT-ACTAGCATCGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TGTG--CT-C-TGAAAGCTT-CAG--------TGG-T-TAT--AGAGTGC--G---GA------GGGC-CC---AT----GCAGA-AA------------C-CTC--GTTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41769 163 -     64179 TC--TGTTG-GCGT-TAT-GCTTG----CA----------CCT-ACCAGCATCGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TGTG--CT-C-TGAAAGCTT-CAG--------TGG-T-TAT--AGAGTGC--G---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23403 163 -     24835 TC--TGTTG-GTGT-TAT-CCTTG----CA----------CCT-ACCAGCATCGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TGTG--CT-C-TGAAACCTT-CAG--------TGG-T-TAT--AGAGTGC--G---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAG-AAT-TCTT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40394 163 +     45454 TC--TGTTG-GCGT-TAT-CCTTG----CA----------CCT-ACCAGCATCGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TGTG--CT-C-TGAAACCTT-CAG--------TGG-T-TAT--AGAGTGC--G---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46043 163 +     70886 TC--TGTTG-GCGT-TAT-GCTTG----CA----------CCT-ACTAGCATCGT---A-TA-G-C--ACAG-A-A-AGTG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TGTG--CT-C-TGAAAGCTT-CAG--------TGG-T-TAT--AGAGTGC--G---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8216 163 +     30854 TC--TGTTG-GCGT-TAT-GCTTG----CA----------CCT-ACCAGCATCGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TGTG--CT-C-TGAAAGCTT-CAG--------TGG-T-TAT--AGAGTGC--G---GA------GGGC-CC---AT----GCAGA-AA------------C-CTC--GTTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32350 163 +     42133 TC--TGTTG-GCAT-TAT-CCTTG----CA----------CCT-ACCAGCATCGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TGTG--CT-C-TGAAAGCTT-CAG--------TGG-T-TAT--AGAGTGC--G---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584739 148 +   2318259 --------------------CTTG----TA----------CCA-ACCAGTGTTGC---A-CG-A-T--GTAG-G-A-AGCA------------CAAG-GA-C--TGGAG-A-GGTCA-----CGTC-CT-GATG--CC-C-TGAAACTTT-GAG--------TGA-T-TAC--AAAGCAC--A---GA------AGTT-CC---AT----GAAGA-AA------------G-ACC--ATTA-CC-TG-CT-GTGT--------C-----------CCTT--G-TCT-T-CAA-AAG-TTGT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176537 148 -    412891 TT--TATTG-GCAT-TTT-CCTTG----TA----------TCA-GCCAGCATTATAGTG-TG-G-T--ACAG-G-T-AGCA------------CAAG-GA-C--CGAA--A-GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--GAGGTGC--A---CA------GGCC-TCGTGAT----GCATA-AA------------G-ATC--ATTC-AT-TG-CT-GTGT----------------------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 19
s Antilocapra_americana.AntAmePen_scaffold_21030             49839 163 -     68529 TC--TACTG-GCAT-CTT-CCTTG----TA----------CCA-ACCAGTGTTGT---A-CA-A-T--GTAG-G-A-AGAG------------CAAG-GA-C--TGAAG-A-GGTCA-----CATT-CT-GATG--TC-C-TGAAACCTT-GAG--------TGA-T-TAC--AAAGTAC--A---GA------AGTT-CC---AT----GAAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TCT-T-CAA-AAG-TCAT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     592 163 +     17741 TC--TGTTG-GCGT-TAT-CCTTG----CA----------CCT-ACTAGCATTGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGGCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--C---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-AAA-AAT-TCTT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1217 163 -     15923 TC--TGTTG-GCGT-TAT-CCTTG----CA----------CCT-ACTAGCATTGT---A-TA-G-C--ACAG-A-A-AGCA------------CAAG-GA-C--TGAAA-A-GGGCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CT-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-AAA-AAT-TCTT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671588  74 +   5030052 -----------------------------------------------------------------------------------------------------------------------------------------------------c-agg--------tgg-t-tAT--ACAGTGC--C---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTgt--------c-----------tctt--g-ttt-t-aaa-aat-tctt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               1492 163 -     16391 TC--TGTTG-GCGT-TAT-CCTTG----CA----------CCT-ACTAGCATTGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGGCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-AAA-AAT-TCTT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1052 163 -     17186 TC--TGTTG-GCGT-TAT-CCTTG----CA----------CCT-ACTAGCATTGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGGCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-AAA-AAT-TCTT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15438 128 -     32367 TC--TATTG-GCAT-TTT-CCTTG----TA----------CCA-ACCAGCATTGC---A-TG-A-T--GTAG-G-A-GGCT------------CAAG-GA-C--TATAA-A-GGTCA-----TGTC-TT-TATT--TT-A-TGAAAGCTT-GAG--------TGA-T-TAC--AAAGTGC--A---GA------GTTC-CC---AT----GAAGA-AA------------G-AT-------------------------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 13
s Arctocebus_calabarensis.k141_1364444                       18967  95 -     45910 GC--TATTC-GCAC-CAC-CC-TG----AA----------CCA-AAGCATACTGC---A-CA-A-T--ACAG-G-G-GACT------------TGAG-GC-C--TTAAA-T-GGTCA-----TGTC-TT-TGTG--CT-C-TGGAAGCTT-CGG--------TGG----------------------------------------------------------------------------------------------------------------------------------------
i Arctocebus_calabarensis.k141_1364444                   C 0 I 63
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4809 148 -     15198 TC--TACTG-GCAT-TTT-CCTTG----TG----------CCA-GCCAGCATTGTAGTG-CA-G-G--ACAG-G-T-AGCA------------AGAG-GA-C--TGAA--A-GGTCA-----CACC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---CG------GGCC-TCGTGAT----GCATA-AA------------G-ATT--GTTA-AT-TG-CC-ACGT----------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 19
s Ateles_geoffroyi_b.tarseq_1536                               274100 163 +  21539123 TC--TGGTG-GCAT-TAT-CCTTG----CA----------CCT-ACTAGCATTGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAACTT-CAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10267 163 +     48076 TC--TGGTG-GCAT-TAT-CCTTG----CA----------CCT-ACTAGCATTGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TATG--CT-C-TGAAAGCTT-CAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5404 163 -     28759 TC--TGGTG-GCAT-TAT-CCTTG----CA----------CCT-ACTAGCATTGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-CAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              32957 163 +     44353 TC--TGGTG-GCAT-TAT-CCTTG----CA----------CCT-ACTAGCATTGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAACTT-CAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48327 163 -     71267 TC--TGGTG-GCAT-TAT-CCTTG----CA----------CCT-ACTAGCATTGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TATG--CT-C-TGAAAGCTT-CAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22386 163 -     33135 TC--TGGTG-GCAT-TAT-CCTTG----CA----------CCT-ACTAGCATTGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-CAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5629 162 +     11645 TC--TATTG-GCAT-CTT-CCTTG----AA----------CCA-AGCAGAATTGC---A-CA-A-T--ATAA-G-A-GGCT------------CAGG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-A-T-TCTT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5637 162 -     19611 TC--TATTG-GCAT-CTT-CCTTG----AA----------CCA-AGCAGAATTGC---A-CA-A-T--ATAA-G-A-GGCT------------CAGG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-A-T-TCTT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956689 100 -  23207421 ----------------------------------------------------------------------------------------------------------------GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGA-T-TAC--AAATTGC--A---GA------GGTC-CC---AA----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAG-TCAT
i Balaenoptera_acutorostrata.KI537508.1                  I 53 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3898 100 -      4711 ----------------------------------------------------------------------------------------------------------------GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGA-T-TAC--AAATTGC--A---GA------GGTC-CC---AA----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAG-TCAT
i Balaenoptera_bonaerensis.DF507193.1                    I 53 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85733 163 +    124022 TC--TATTG-GCAT-TTT-CCTTG----CA----------CCA-ACCAGTGTTGC---A-CA-A-T--GTAG-A-A-AGCA------------CAAG-GA-C--TGGAG-A-GGTCA-----CATC-CT-GGTG--TC-C-TGAAACTTT-GAA--------TGA-T-TAC--AAAGTAC--A---GA------AGTC-CC---AC----GAAGA-AA------------G-ATC--ATTA-CC-TG-CT-GTGT--------C-----------CCTT--G-TCT-T-CAA-AAG-TCAT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21265 163 +    288883 TC--TATTG-GCAT-TTT-CCTTG----TA----------CCA-ACCAGTGTTGC---A-CA-A-T--GTAG-G-A-AGCA------------CAAG-GA-C--TGGAG-A-GGTCA-----CATT-CT-GATG--GC-C-TGAAACTTT-GAG--------TGA-T-TAC--AAAGTAC--A---GA------AGTC-CC---AT----GAAGA-AA------------G-ATc--atta-cc-tg-ct-gtgt--------c-----------cctt--g-TCT-T-CAA-AAG-TCGT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355651 163 +  48749331 TC--TATTG-GCAT-TTT-CCTTG----TA----------CCA-ACCAGTGTTGC---A-CA-A-T--GTAG-G-A-AGCA------------CAAG-GA-C--TGGAG-A-GGTCA-----CATT-CT-GATG--GC-C-TGAAACTTT-GAG--------TGA-T-TAC--AAAGTAC--A---GA------AGTC-CC---AT----GAAGA-AA------------G-ATc--atta-cc-tg-ct-gtgt--------c-----------cctt--g-TCT-T-CAA-AAG-TCGT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754219 163 +   1948126 TC--TATTG-GCAT-TTT-CCTTG----TA----------CCA-ACCAGTGTTGC---A-CA-A-T--GTAG-G-A-AGCA------------CAAG-GA-C--TGGAG-A-GGTCA-----CATT-CT-GATG--GC-C-TGAAACTTT-GAG--------TGA-T-TAC--AAAGTAC--A---GA------AGTC-CC---AT----GAAGA-AA------------G-ATc--atta-cc-tg-ct-gtgt--------c-----------cctt--g-TCT-T-CAA-AAG-TCGT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544358 163 -  45695690 TC--TATTG-GCAT-TTT-CCTTG----TA----------CCA-ACCAGTGTTGC---A-CA-A-T--GTAG-G-A-AGCA------------CAAG-GA-C--TGGAG-A-GGTCA-----CATT-CT-GATG--GC-C-TGAAACTTT-GAG--------TGA-T-TAC--AAAGTAC--A---GA------AGTC-CC---AT----GAAGA-AA------------G-ATc--atta-cc-tg-ct-gtgt--------c-----------cctt--g-TCT-T-CAA-AAG-TCGT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529383 163 -   4408762 TC--TATTG-GCAT-TTT-CCTTG----TA----------CCA-ACCAGTGTTGC---A-CA-A-T--GTAG-G-A-AGCA------------CAAG-GA-C--TGGAG-A-GGTCA-----CATT-CT-GATG--GC-C-TGAAACTTT-GAG--------TGA-T-TAC--AAAGTAC--A---GA------AGTC-CC---AT----GAAGA-AA------------G-ATc--atta-cc-tg-ct-gtgt--------c-----------cctt--g-TCT-T-CAA-AAG-TCAT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7274 162 +     28062 TC--CGTTG-GCAT-TAT-CCTTG----CA----------CCT-ACTGGCGCTGC---A-CA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-GGAAAGCTC-CAG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC-C----AT----GCAGA-AA------------G-CTC--ATCA-CC-CG-CT-GTGT--------C-----------TCTT--G-TCT-T-CAA-AAT-TCTT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42568 162 -     91139 TC--CGTTG-GCAT-TAT-CCTTG----CA----------CCT-ACTGGCGCTGC---A-CA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-GGAAAGCTC-CAG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC-C----AT----GCAGA-AA------------G-CTC--ATCA-CC-CG-CT-GTGT--------C-----------TCTT--G-TCT-T-CAA-AAT-TCTT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20094 162 +     95584 TC--CGTTG-GCAT-TAT-CCTTG----CA----------CCT-ACTGGCGCTGC---A-CA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-GGAAAGCTC-CAG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC-C----AT----GCAGA-AA------------G-CTC--ATCA-CC-CG-CT-GTGT--------C-----------TCTT--G-TCT-T-CAA-AAT-TCTT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20007 162 +    119600 TC--CGTTG-GCAT-TAT-CCTTG----CA----------CCT-ACTGGCGCTGC---A-CA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-GGAAAGCTC-CAG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC-C----AT----GCAGA-AA------------G-CTC--ATCA-CC-CG-CT-GTGT--------C-----------TCTT--G-TCT-T-CAA-AAT-TCTT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9574 162 +     18648 TC--CGTTG-GCAT-CAT-CCTTG----CA----------CCT-ACCAGCATTGT---A-TT-T-C--ACAG-A-A-AGCA------------CAAG-GA-A--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GGG--------TGG-T-TAT--AGAGTGC--A---GA------GGCC--C---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9113 162 -     13885 TC--TGTTG-GCAC-CGT-CCTTG----CA----------CCT-ACCAGCATTGT---A-TC-T-C--ACAG-A-G-GGCA------------CAAG-GA-C--TGAGA-A-GGTCA-----TGTC-TT-TACG--CT-C-TGAAAGCTT-GGG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC--C---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-CTT-T-CAA-AAT-TCTT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1179 162 -      8861 TC--CGTTG-GCAT-CAT-CCTTG----CA----------CCT-ACCAGCATTGT---A-TT-T-C--ACAG-A-A-AGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TC-TATG--CT-C-TGAAAGCTT-GTG--------TGG-T-TAT--AGAGTGC--A---GA------GGCC--C---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453572 162 + 189096842 TC--CGTTG-GCAT-CAT-CCTTG----CA----------CCT-ACCAGCATTGT---A-TT-T-C--ACAG-A-A-AGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TC-TATG--CT-C-TGAAAGCTT-GGG--------TGG-T-TAT--AGAGTGC--A---GA------GGCC--C---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1094 162 +      8664 TC--CGTTG-GCAT-CAT-CCTTG----CA----------CCT-ACCAGCATTGT---A-TT-T-C--ACAG-A-A-AGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TC-TATG--CT-C-TGAAAGCTT-GGG--------TGG-T-TAT--AGAGTGC--A---GA------GGCT--C---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630399 163 +  17673402 TC--TATCT-GCGT-TTT-TCTTG----TA----------CCA-ACCAGCATTGC---A-CA-A-T--ATAG-G-A-AGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----CATC-CT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--CAAGTGC--A---AA------GGTC-CC---AC----ACAGA-TA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--A-TTT-T-CAA-AAG-TCCT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664685 163 +   7040546 TC--TATCT-GCGT-TTT-TCTTG----TA----------CCA-ACCAGCATTGC---A-CA-A-T--ATAG-G-A-AGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----CATC-CT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--CAAGTGC--A---AA------GGTC-CC---AC----ACAGA-TA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--A-TTT-T-CAA-AAG-TCCT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208345 163 +   1652518 TC--TATCT-GCGT-TTT-TCTTG----TA----------CCA-ACCAGCATTGC---A-CA-A-T--ATAG-G-A-AGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----CATC-CT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--CAAGTGC--A---AA------GGTC-CC---AC----ACAGA-TA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--A-TTT-T-CAA-AAG-TCCT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504760 160 +  60362399 TC--TATAG-GTGT-TTT-CCTTG----TA----------CCA-ACCAGCAGTGA---A-CA-A-T--GGAG-G-A-AGCA------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-AATA--TT-T-TGAAAGCTT-GAG--------TGG-T-TAC--AAAATGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C--------------T--G-TTT-T-CAA-AAT-TCTT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8396 160 -     23171 TC--TATAG-GTGT-TTT-CCTTG----TA----------CCA-ACCAGCAGTGA---A-CA-A-T--GGAG-G-A-AGCA------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-AATA--TT-T-TGAAAGCTT-GAG--------TGG-T-TAC--AAAATGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C--------------T--G-TTT-T-CAA-AAT-TCTT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221739 160 +   9314153 TC--TATAG-GTGT-TTT-CCTTG----TA----------CCA-ACCAGCAGTGA---A-CA-A-T--GGAG-G-A-AGCA------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-AATA--TT-T-TGAAAGCTT-GAG--------TGG-T-TAC--AAAATGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------c--------------t--g-ttt-t-caa-aat-tctt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41614874 160 +  59632846 TC--TATAG-GTGT-TTT-CCTTG----TA----------CCA-ACCAGCAGTGA---A-CA-A-T--GGAG-G-A-AGCA------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-AATA--TT-T-TGAAAGCTT-GAG--------TGG-T-TAC--AAAATGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------c--------------t--g-ttt-t-caa-aat-tctt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106455 160 -  63665305 TC--TATAG-GTGT-TTT-CCTTG----TA----------CCA-ACCAGCAGTGA---A-CA-A-T--GGAG-G-A-AGCA------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-AATA--TT-T-TGAAAGCTT-GAG--------TGG-T-TAC--AAAATGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------c--------------t--g-ttt-t-caa-aat-tctt
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408469 148 -  46296322 --------------------CTTG----TA----------CCA-ACCAGTGTCGC---A-CG-A-T--GTAG-G-A-AGCA------------CAAG-GC-C--TGGAG-A-GGTCA-----CGTC-CT-GATG--TC-C-TGAAACTTT-GAG--------TGA-T-TAC--AAAGCAC--A---GA------AGTC-CC---AT----GAAGA-AA------------G-ACC--GTTA-CC-TG-CT-GTGT--------C-----------CCTT--G-TCT-T-CAA-AAG-TCGT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590742 148 +  44709034 --------------------CTTG----TA----------CCA-ACCAGTGTCGC---A-CG-A-T--GTAG-G-A-AGCA------------CAAG-GC-C--TGGAG-A-GGTCA-----CGTC-CT-GATG--TC-C-TGAAACTTT-GAG--------TGA-T-TAC--AAAGCAC--A---GA------AGTC-CC---AT----GAAGA-AA------------G-ACC--GTTA-CC-TG-CT-GTGT--------C-----------CCTT--G-TCT-T-CAA-AAG-TCGT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1016  97 -      1880 ------------------------------------------------------------------------------------------------------------------GTC-----TGTC-TT-TATT--TT-C-CGGGATCTT-GAG--------TGA-T-TAA--AAATTGT--G---GG------AGTC-TC---AT----GCAGA-AA------------G-ATC--ATTA-C--TG-TC-ATTC--------C-----------TTTT--G-TCT-T-TAA-CAT-TGTT
i Capromys_pilorides.CapPil_scaffold_652123              I 59 C 0
s Carlito_syrichta.NW_007259797.1                           269725  96 +    496798 --------------------------------------------------------------------------------------------------------------------------------T-TATT--CT-T-TGAAAGCTT-TAGTGCTTTA-TGG-T-TAC--AGAATGC--A---CA------GGTC-TC---AT----GCAGA-AA------------G-TTC--ATTA-CT-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CGA-T-T-TCTT
i Carlito_syrichta.NW_007259797.1                        I 68 C 0
s Carollia_perspicillata.CarPer_scaffold_668536                755 149 -      1021 TC--TATTG-GCAT-TTT-CCTTG----TA----------CCA-GCCAGCATCGCAGTG-CA-A-T--ACAG-G-T-AGCA------------CGAG-GA-C--CGAG--A-GATCA-----CACC-TT-TACC--TT-C-TGAACGCTT-GAG--------TGG-TCTAT--AGAGTGC--A---CG------GGCC-TCGTGAT----GCATA-AA------------G-ATC--ATTG-AT-GG-CC-GTGT----------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_668536          C 0 N 0
s Castor_canadensis.CasCan_scaffold_39952                    27076 163 -     39886 TC--TGTTG-GCAT-TTT-CCTTG----CA----------CCA-AACAGCACTGC---A-CA-A-T--ATCA-G-A-GGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATC--TT-C-TGAAAGCTT-GAG--------TGG-T-TCC--TGAGTGC--A---GA------GGTC-CC---AT----GCATA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------T-----------TCTT--G-TTT-T-CAA-TAT-TCTT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     78935 164 -    217609 TC--TATTG-GCAT-CTT-CCTTG----TA----------CTA-ACTAGCATTGC---A-CA-A-T--ATAG-G-A-AGTG------------TAAG-AA-T--TGAAA-A-GGTCA-----CATC-CT-TATG--TT-C-TGAAAGCTC-GAG--------TGG-T-TAC--AAAGTGC--T---GA------GGTC-CT---GT----GCAGA-AA------------G-ATC--ATTA-CC-TA-CTAATGT--------C-----------CCTT--G-TTT-T-CCA-AAG-TCTT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995796 167 +  23392119 -C--CATTG-GCAT-ATT-CTTTG----TA----------TCA-TTCAGCTCTGT---A-CA-G-T--ATAC-A-A-GGCA------------CTAG-GA-C--CGAAA-G-Gggaa-----tgtc-tt-tatt--tt-c-tgagAACTT-GAA--------TGT-T-TAT--AAATTGC--A---GAGCGG-GGGTC-TC---AT----GCAGA-AA------------G-ATC--ATTA-CT-Tg-ct-atgc--------t-----------tttt--a-ttt-t-cag-cCT-TCTT
i Cavia_aperea.AVPZ01000300.1                            I 8 C 0
s Cavia_porcellus.DS562891.1                               4999238 167 +  23407841 -C--CACTG-GCAT-CTT-CTTTG----TA----------TCA-TTCAGCTCTGT---A-CA-G-T--ATAC-A-A-GGCA------------CTAG-GA-C--CGAAA-G-Gggaa-----tgtc-tt-tatt--tt-c-tgagAACTT-GAA--------TGT-T-TAT--AAATTGC--A---GAGCGG-GGGTC-TC---AT----GCAGA-AA------------G-ATC--ATTA-CT-Tg-ct-atgc--------t-----------tttt--a-ttt-t-caa-cct-TCTT
i Cavia_porcellus.DS562891.1                             I 8 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62319 167 -     66877 -C--CACTG-GCAT-CTT-CTTTG----TA----------TCA-TTCAGCTCTGT---A-CA-G-T--ATAC-A-A-GGCA------------CTAG-GA-C--CGAAA-G-GGGAA-----TGTC-TT-TATT--TT-C-TGAGAACTT-GAA--------TGT-T-TAT--AAATTGC--A---GAGCGG-GGGTC-TC---AT----GCAGA-AA------------G-ATC--ATTA-CT-TG-CT-ATGC--------T-----------TTTT--A-TTT-T-CAA-CCT-TCTT
i Cavia_tschudii.CavTsc_scaffold_23560                   I 8 C 0
s Cebuella_niveiventris.k141_592277                           4492 162 -     12580 TC--CGTTG-GCAT-CAT-CCTTG----CA----------CCT-ACTAGCATTGT---A-TT-T-C--ACAG-A-A-AGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GGG--------TGG-T-TAT--AGAGTGC--A---GA------GGCC--C---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42550 162 +     53515 TC--CGTTG-GCAT-CAT-CCTTG----CA----------CCT-ACCAGCATTGT---A-TT-T-C--ACAG-A-A-AGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GGG--------TGG-T-TAT--AGAGTGC--A---GA------GGCC--C---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370480 163 -  26074798 TC--TGTTG-GCAT-TAC-CCTTG----CA----------GCT-GCTAGCATGGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GG-C--TGAAC-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCCT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGGC-CC---GT----GCAGA-AA------------G-CTC--CTTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TCT-T-CAA-AAT-TCTT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7369 163 -     34880 TC--TGTTG-GCAT-TAC-CCTTG----CA----------GCT-GCTAGCATGGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GG-C--TGAAC-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCCT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGGC-CC---GT----GCAGA-AA------------G-CTC--CTTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TCT-T-CAA-AAT-TCTT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66464 163 -     89041 TC--TGTTG-GCAT-TAC-CCTTG----CA----------GCT-GCTAGCATGGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GG-C--TGAAC-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCCT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGGC-CC---GT----GCAGA-AA------------G-CTC--CTTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TCT-T-CAA-AAT-TCTT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1685  97 -      5494 --------------------------------------------------------------------------------------------------------------------------------T-TATT--CT-T-TGAAAGCTT-TAGTGCTTTAGTGG-T-TAC--AGAATGC--A---CA------GGTC-CC---AT----GCAGA-AA------------G-TTC--ATTA-CT-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CGA-T-T-TCTT
i Cephalopachus_bancanus.k141_1689090                    I 68 C 0
s Ceratotherium_simum.JH767749.1                          15491571 162 -  27778364 TG--GATTG-GTAT-TCT-CCTTG----GA----------CCA-ACCAGCACTGT---A-CA-A-T--ATAG-G-A-AGCA------------GGCG-GA-C--TG-AG-A-GGTCA-----CATC-TC-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---AA------GATC-CC---AT----ATAGA-AG------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------tctt--g-ttt-t-caa-aat-tctt
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18404 162 +     27315 TG--GATTG-GTAT-TCT-CCTTG----GA----------CCA-ACCAGCACTGT---A-CA-A-T--ATAG-G-A-AGCA------------GGCG-GA-C--TG-AG-A-GGTCA-----CATC-TC-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---AA------GATC-CC---AT----ATAGA-AG------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140420 121 -   4669795 ----------------------------------------------------------------------AG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGt--------c-----------tctt--a-ttt-t-caa-aat-tctt
i Cercocebus_atys.KQ010504.1                             I 32 C 0
s Cercocebus_chrysogaster.k141_1522556                       44162 121 +     47900 ----------------------------------------------------------------------AG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Cercocebus_chrysogaster.k141_1522556                   I 32 C 0
s Cercocebus_lunulatus.k141_2779015                          43987 120 -     44860 ----------------------------------------------------------------------AG-A-A-G-CA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Cercocebus_lunulatus.k141_2779015                      I 32 C 0
s Cercocebus_torquatus.k141_2159127                          43975 121 -    148725 ----------------------------------------------------------------------AG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Cercocebus_torquatus.k141_2159127                      I 32 C 0
s Cercopithecus_ascanius.k141_3120866                        26120 163 -     40656 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACCAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAGG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------A-CCC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6086 163 +     20796 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACCAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAGG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------A-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11203 163 -     17524 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAGG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          26925 163 -     34525 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACCAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAGG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10706 163 -     25376 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAGG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TGT--AGAGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------A-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363302 163 -  39242232 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGAGTAC--A---CA------GGGC-TC---AT----GCAAA-AA------------A-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269018 163 +  21565898 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TGT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAGG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TGT--AGAGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------A-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31392 163 -     45857 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAGG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------A-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26291 163 -     32606 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGAGTAC--A---CA------GGGC-TC---AT----GCAAA-AA------------A-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2450 163 +      8499 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACCAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAGG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------A-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           24848 163 +     70610 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAGG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------A-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21817 163 +     36323 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAGG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---CA------GGGC-TC---AC----GCAAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12177  80 -     19938 GC--GGTTG-GCGT-TCT-CCTCG----TG----------CCA-ACCAGCACTGC---C-TC-C-T--ACGG-G-A-GACG------------CGAG-GT-C--TGAAA-A-GGTCA-----CGTC-TT-CCTG--TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 46
s Cheirogaleus_major.k141_666340                             30004 163 -     33796 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAATTGC---A-CA-A-T--ACAG-G-A-TGTT------------TGAG-GA-C--TGAAA-A-GATCG-----TGTC-TT-TATG--TT-C-TGAAGGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CT---AT----GCAGA-AA------------G-CTC--ATTA-TC-TG-TT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4521 163 -     15404 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAATTGC---A-CA-A-T--ACAG-G-A-GGTT------------TGAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--TT-C-TGAAGGCTT-GAG--------TGG-T-TAC--ACAGTGC--A---GA------GGTC-CT---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-TT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8367 163 -     32913 TC--TGTTG-GCAT-TAT-CCTTG----CA----------CCC-ACTAGCACTGC---A-TA-G-C--ACAG-A-A-CGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18780 163 -     40346 TC--TGTTG-GCAT-TAT-CCTTG----CA----------CCC-ACTAGCACTGC---A-TA-G-C--ACAG-A-A-CGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19035 163 +    216457 TC--TGTTG-GCAT-TAT-CCTTG----CA----------CCC-ACTAGCACTGC---A-TA-G-C--ACAG-A-A-CGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18828 163 +     39636 TC--TGTTG-GCAT-TAT-CCTTG----CA----------CCC-ACTAGCACTGC---A-TA-G-C--ACAG-A-A-CGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238266  81 -   2543920 ----------------------------------------------------------------------------------------------------------------------------------------------TAGAACTT-GTG--------TGG-T-TAC--AGAGTGT--G---GA------GGTG-TC---AT----GCAGA-CA------------G-ATT--ATTA-CC-TA-CT-ATAC--------C-----------TTTT--G-TTT-T-CAA-CAC-TGTT
i Chinchilla_lanigera.JH722012.1                         I 19 I 31
s Chiropotes_albinasus.k141_1946120                           3422 163 +      5346 TC--TGTTG-GCAT-CAT-CCTTG----CA----------CCT-GCTAACTTTGT---A-TT-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CC-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           41905 162 -    112038 TC--CGTTG-GCAT-CAT-CCTTC----CA----------CCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGAAAGCTC-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC-C----AT----GCAGA-AA------------G-CTC--ATCA-CC-CG-CT-GTGT--------C-----------TCTT--G-TCT-T-CAA-AAT-TCTT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7476 162 +     34062 TC--CGTTG-GCAT-CAT-CCTTC----CA----------CCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGAAAGCTC-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC-C----AG----GCAGA-AA------------G-CTC--ATCA-CC-CG-CT-GTGT--------C-----------TCTT--G-TCT-T-CAA-AAT-TCTT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342708 163 +  18827391 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCAGCACTGC---A-CA-G-C--ACAG-A-A-GACA------------CAAG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGGGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9255 163 -     44032 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCAGCACTGC---A-CA-G-C--ACAG-A-A-GACA------------CAAG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304032 163 - 135778131 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCAGCACTGC---A-CA-G-C--ACAG-A-A-GACA------------CAAG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGGGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------c-----------tctt--a-ttt-t-caa-aat-tctt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14176 163 +     15858 TC--TGTTG-GCAT-TTT-CCTTG----CA----------CCA-ACCGGCATTGC---C-TA-A-T--GTAG-G-A-GACA------------CAGG-GT-C--TGAAA-A-GGTCA-----CGTC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGTC-TC---AT----GCAGG-AA------------G-ATC--ATTA-CC-TG-CT-GTGT--------T-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605752 163 -    839153 TC--TGTTG-GCAT-TTT-CCTTG----CA----------CCA-ACCGGCATTGC---C-TA-A-T--GTAG-G-A-GACA------------CAGG-GT-C--TGAAA-A-GGTCA-----CGTC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGTC-TC---AT----GCAGG-AA------------G-ATC--ATTA-CC-TG-CT-gtgt--------t-----------tctt--g-ttt-t-aaa-aat-tcct
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                175 163 +      2406 TC--TATTG-ACAT-TTT-CTGTG----TA----------CCA-ACCCACCTTGC---A-CA-A-T--CCGG-G-A-GCCA------------CAAG-GA-C--TGAAA-A-GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AATGTAC--A---GA------AGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-GC-TG-CT-CTGC--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             408461 163 -   2368649 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTA-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTAT--------C-----------TCTG--G-TTT-T-CAG-CAT-TCTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378337 163 - 200372422 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               1886 163 -     84244 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806642 175 +  53390261 NN--NNNNG-GGCT-TTT-CCTTG----GG----------CCA-ACTAGAAAGGT---G-CC-A-C--CTAG-G-A-GGCA------------CAAG-GA-C--TGTAA-A-GGTCA-----CATC-TT-TGTG--TT-C-TGAAAGCTT-GAG--------TTG-T-TAG--AAAGTGG--A---GA------GGTCCC----AA----GCAGA-TAGAGGTCCCAGCAG-ATC--ATTA-CC-TG-CT-TTGt--------c-----------cttt--g-ctt-t-caa-aat-tttt
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2169 166 -      8242 TC--TATTG-GCAT-TTT-CCTTG----TA----------CCA-ACAAGCACTGC---A-CA-A-T--ATAG-G-A-AGCT------------CAAG-GA-C--TGAAA-A-GGTCATGTCATGTC-TT-TATA--TT-A-TGAAAGCTT-GAG--------TGG-T-TAT--AAAGTAC--A---GA------GGC---C---AT----GCAGA-AA------------G-ACC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAA-TCTT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43670 161 -     83289 TC--TATTG-GCAC-TTT-CATCG----CA----------CCC-A-CAGCAAGGC---A-CA-A-C--ACAG-G-A-GGCA------------CA-G-GA-C--TGAAA-A-GGTCA-----CGTC-TC-TATT--TT-C-TGAAAGCTT-GAG--------TGC-T-TCC--CAAGTGC--T---GA------GGTC-CT---CT----GCAGA-AA------------G-ATC--GCTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-TAT-TCTT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114240 161 - 224834208 TC--TATTG-GCAT-GTT-CATTG----TA----------CCC-A-CAGCAAAGC---A-TG-G-C--ACAG-G-A-GGCA------------CA-G-GG-T--TGAAA-A-GGTCA-----TGTC-TT-TATT--TC-C-TGAAAGCTT-GAG--------TGC-T-TCC--TAAGTGT--A---GA------GGTC-CT---CT----ACAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-TAT-TCTT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6812 173 +     12657 --------G-GCAT-TTT-CCTTG----TA----------CCA-GGTAGCATTGT---A-TA-A-T--A----G-A-GGCA------------CAAG-AA-C--TGAAA-A-GGGTA-----TACC-TT-TATT--CT-C-TAAAAGCTT-GAG--------TGG-C-TAT--AAGAAGC--A---AA------GGAT-C----AA---TATAGA-AA------------T-ATT--ATTA-CC-TC-AT-ATATATATATATCCTCATATATATACTT--T-CTT-T-GAG-AAT-GATT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3728 163 +     87169 TC--TACTG-GCAT-TTT-CCTTG----TA----------CCG-ACAAGCACCAT---A-CA-G-T--GGATGG-A-AGCA------------TG-G-GA-C--TGGAA-A-GGTCA-----CATC-TT-CCTG--TC-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-GTGC--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644388 124 -   1526836 TC--TATTG-GCAT-CAT-TCTTG----TG----------CCA-ACCAGAACTGC---A-CG-C-T--ATAG-A-A-AGCA------------CAAG-GA-C--TGAA--A-GGTCA-----TGTC-TT-TATT--TC-T-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---GT------GGTC-CC---AT----GTAGA-GA-----------------------------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 37
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17752 161 +     50838 TC--TAGTG-GTAT-CTT-CCTCG----TA----------CCA-GCCAACACCGT---A-CA-G-T--GTAA-C-A-GGCA------------CAAG-GA-C--TGAAA-A-GGGTC-----TGTT-TT-TATT--TT-C-TGGGAACTT-GAG--------TGA-T-TAC--A-AGTGT--G---GG------GATC-TC---AT----GCAGA-AA------------G-ATC--ATTA-C--TG-TC-ATGC--------C-----------TTTT--G-TCT-T-CAA-CAT-TGTT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 3 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3717 128 +     36344 TC--TATTG-GCAT-CTT-CCTTG----TA----------TCA-GTCAGCATTGT---A-CA-G-T--GTAG-A-A-GGCA------------CAAG-GA-C--TGAAA-A-GGGCA-----TGTC-TT-TATT--TT-C-TGAGAACTT-GAG--------TGG-T-TAC--AAAGTGC--AGAGGA------GGTC-TC---AT----GCAGA-AA-----------------------------------------------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              I 8 I 37
s Dasyprocta_punctata.DasPun_flattened_line_15900            27495 163 +     75252 TC--TACTC-TCAT-CTC-CTTTG----TA----------TCA-GCCAGCACTGT---G-CA-G-T--GTAG-A-A-GGCA------------CAAG-GA-C--TGAAA-A-GGGTG-----CGTC-TT-TATT--TT-C-TGAGAATCT-GAG--------TAA-T-TAC--AAAGTGC--A---GA------GGTC-TC---AT----GCAGA-AA------------G-ATC--ATTA-CC-CT-CT-ATGC--------C-----------TTTT--G-TTT-T-CAA-ACT-TCTT
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 8 C 0
s Dasypus_novemcinctus.JH564415.1                          2109520 159 -   2246927 TC--CATC--GTGT-TTT-CCTCG----TG----------CCA-GCCAGCACTGC---C-TC-C-T--GTGG-G-A-AACC------------TGCG-GT-C--TGAAA-A-GGCCA-----CATC-CC-TGTG--TT-C-CCAAAGCTT-GAG--------TGG-G-TCC--A--GTGC--A---GA------GGTC-CT---GA----GCAGG-GA------------G-AGC--ATCA-CC-TG-CT---GT--------T-----------TCtt--g-ttt-tccaa-aat-tctt
i Dasypus_novemcinctus.JH564415.1                        C 0 I 31
s Daubentonia_madagascariensis.ctg71                        291938 163 +  12879189 TC--TGTTG-GCCT-CAT-CCTTG----AG----------CCA-AGCAGCATTGC---A-CG-G-T--ACAA-G-A-GGCT------------CAAG-GA-C--TGGAC-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTC-GAG--------TGC-T-TAT--AGAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625221 100 -  35494412 ----------------------------------------------------------------------------------------------------------------GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGA-T-TAC--AAATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAG-TAAT
i Delphinapterus_leucas.KZ290073.1                       I 53 C 0
s Desmodus_rotundus.KZ672289.1                            11864558 158 -  20541912 GC--TAT-G-GCAT-TTT-CCTTG----TA----------CCA-GTCAGCATTATAGTG-CA-G-T--ACAG-G-T-AGCAGTATAGGTAGCGCAAG-GA-C--CGAA--A-GGTCA-----CATC-TT-TATG--T--C-TGAAAGCTC-GAG--------TGG-T-TAC--AAGGTGC--A---TA------GGCC-TCATGAT----GCATA-AA------------G-ATC--ATTA-AT-TG-CT-GTGT----------------------------------------------
i Desmodus_rotundus.KZ672289.1                           C 0 I 709
s Dicerorhinus_sumatrensis.PEKH010002091.1                  663856 162 -   1390856 TG--GATTG-GCAT-TTT-CCTTG----GA----------CCA-ACCAGCACTGT---A-CA-A-T--ATAG-G-A-AGCA------------GGCG-GA-C--TG-AG-A-GGTCA-----CATC-TC-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---AA------GATC-CC---AT----ATAGA-AG------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------TCtt--g-ttt-t-caa-aat-tctt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138648 162 -    198055 TG--GATTG-GTAT-TTT-CCTTG----GA----------CCA-ACCAGCACTGT---A-CA-A-T--ATAG-G-A-AGCA------------GGCG-GA-C--TG-AG-A-GGTCA-----CATC-TC-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---AA------GATC-CC---AT----ATAGA-AG------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98260 163 -    115145 GT--TACTG-GCAT-CTTTC-TTG----TA----------CCA-GCCAGCACTGC---A-CA-G-T--GTAG-A-A-GGCA------------CAAG-GA-C--TGCAA-A-GGGCG-----TGTC-TT-TGTT--TT-C-TGAGAACTG-GTG--------TGG-T-TAC--AGAGTGT--G---GC------AGTC-CC---AT----GCAGA-AA------------G-ATG--ATAA-CC-TG-CT-ATGC--------C-----------TTTT--A-TTT-T-CAA-CGT-TCTT
i Dinomys_branickii.DinBra_scaffold_10381                I 7 C 0
s Dipodomys_ordii.KN672350.1                              18949858 163 -  37912305 TC--TATTG-GCAT-TTC-CCTTG----TG----------CCA-GCCAACACCGC---A-CA-A-C--AGCA-G-A-GGCA------------CAAG-GA-C--CAAAA-A-Ggtca-----tgtc-tt-tatt--tt-t-tgaaagccT-GAA--------TGG-T-TTC--AAAGTGC--C---AA------GTTC-CC---AC----GCATG-AA------------G-ATC--ATTA-CT-TG-CT-CTGT--------C-----------TCTT--G-TTT-T-GAG-TAT-TCTT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4797 148 -     10735 TC--TATTG-GCAT-TTC-CCTTG----TG----------CCA-GCCAACACCGC---A-CA-A-T--AGCG-G-A-GGCA------------CAAG-GA-C--CAAAA-A-GGTCA-----TGTC-TC-TATT--TT-C-TGAAAGCCT-GAA--------TGG-T-TTC--AAAGTGC--C---AA------GTTC-CC---AT----GCATA-AA------------G-ATC--ATTA-CT-TG-CT-CTGT--------C-----------TCTT----------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 14
s Dolichotis_patagonum.DolPat_scaffold_80628                  9749 169 +     14636 TC--TATTG-GCAT-CTT-CTTTG----TA----------ACA-GCCAGCTCTAT---AATA-G-T--ATAC-A-A-GGCA------------CTAG-GA-C--CGAGG-A-GGGCA-----TGTT-TT-TATT--TT-C-TGAGAACTT-GAA--------TGG-T-TAG--CAATTGC--A---GAGCAG-AGGAC-TC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGC--------A-----------TTTT--G-TTT-T-CAA-CCT-TCTT
i Dolichotis_patagonum.DolPat_scaffold_80628             I 8 C 0
s Echinops_telfairi.JH980293.1                            62854496 163 - 111700974 TC--TATTG-GCAT-TTC-CCTTG----TA----------GCA-ACCAGCTTTGT---G-CA-A-T--ACAG-G-A-GACA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--TT-C-TGAGAGCCT-GAG--------TGG-T-TAC--AAAATGC--A---GA------GGTC-CC---GC----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-CTGA--------C-----------TGTT--G-TTT-T-CAC-AAT-TCTT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5634 162 +     19438 TC--TATTA-GCAT-TTT-CCTTA----TA----------C-A-ACCAGCATTGC---A-CA-A-T--ATAG-G-A-GTCA------------CAAG-GA-C--TGAAA-A-GATCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGT--A---GC------AGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------cctt--g-ttt-t-caa-aat-tctt
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239097 163 -    607251 TC--TATTG-TCAT-TTT-CCTTG----TA----------CCA-GCCAGTGTTAC---A-CA-A-T--GTAG-G-A-AGCA------------CAAG-GA-C--TGAAG-A-GGTCA-----CATT-CT-GATG--TC-C-TGAAACCTT-AAC--------TGA-T-GAC--AAAGTAC--A---GA------AGTT-CC---AT----GAAGA-AA------------G-ATC--ATTA-CC-TG-AT-TTGT--------C-----------CCTT--G-TCT-T-CAA-AAG-TCGT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108117 163 -  10337057 TA--TATTG-GCAT-TTT-CCTTG----TA----------CAA-ACCAGCCTTGC---A-CA-A-T--ACAG-G-A-GACA------------CAAG-ga-c--tgaaa-a-ggtca-----tggc-tg-TAAG--TT-C-TGAAAGCTT-GAG--------CGG-T-TAC--AAAGTGC--A---GA------GGTC-CC---AT----ACAGT-AA------------G-ATC--ATTA-CC-TG-TG-TTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30456  93 +    110024 ----------------------------------------------------------------------------------------------------------------------------TC-TT-TATT--TT-C-TGAACGCTT-GAG--------TGC-T-TCC--CAAGTGC--A---GA------GGTC-CT---TT----GCAGA-AA------------G-ATC--ATTA-CC-TG-GT-CTGT--------C-----------CCTT--G-TTT-T-CAA-TAT-TCTT
i Ellobius_lutescens.LOEQ01008920.1                      I 63 C 0
s Ellobius_talpinus.LOJH01026522.1                           12359 161 +     18970 TC--TATTG-GCAT-GTT-CCTTG----TA----------CCC-A-CAGCAAGGC---A-CA-G-C--ATAG-A-A-GGCA------------CA-G-GG-C--TGAAA-A-Ggtca-----tgtc-tt-tatt--tt-c-tgaACGCTT-GAG--------TGC-T-TCC--TAAGTGC--A---GA------GGTC-CT---TT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-CTGT--------C-----------CCTT--G-TTT-T-CAA-TAT-TCTT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915475 167 +  41312741 TC--TATAG-GTGT-TTT-CCTTT----CA----------CCA-ACCAGCACTGA---A-CA-A-T--GGAG-G-A-AGCA------------GAAG-CA-C--TGGAA-A-GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAT--------TGG-T-TTC--AAAGTGC--A---GA------GGTC-CG---GCGCGTGCAGA-AA------------G-ATC--ATTA-CC-TG-CT-GTGT--------C-----------tctt--g-ttt-t-caa-aat-tctt
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578279 163 +  14770903 TC--TATTG-GCAT-TTC-CCTTG----TA----------TCA-GCCCCCATTGC---A-CA-C-C--ACAG-G-A-AGCA------------CAAG-GA-C--GGAAA-A-GATCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--CAAGCGC--A---TA------GGTC-CC--A-T----GCAGA-AA------------G-ATC--ATTA-CT-TG-CT-TCGT--------C-----------cctt--g-ttt-t-caa-aat-tctt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040731 164 -   4378816 TC--GACTG-GCAT-TTT-CCTTG----TA----------CCA-ACCAGCACCGC---A-CA-T-T--ATAG-G-A-AGCA------------GGAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-TGTG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---AA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTAACC-CG-CT-ATGT--------c-----------tctt--g-ttt-t-caa-aat-tctt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374669 164 +  39960074 TC--GACTG-GCAT-TTT-CCTTG----TA----------CCA-ACCAGCACCGC---A-CA-T-T--ATAG-G-A-AGCA------------GGAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-TGTG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---AA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTAACC-CG-CT-ATGT--------C-----------tctt--g-ttt-t-caa-aat-tctt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                              50 164 -      1194 TC--GACTG-GCAT-TTT-CCTTG----TA----------CCA-ACCAGCACCGC---A-CA-T-T--ATAG-G-A-AGCA------------GGAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-TGTG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---AA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTAACC-CG-CT-ATGT--------c-----------tctt--g-ttt-t-caa-aat-tctt
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665474 115 +   7059049 TC--AATTG-GCAA-TTT-ATTTG----TA----------GAC-ACTAGTACTGT---T-CA-G-T--TTAG-A-A-GACA------------CAAG-GA-C--TGAAA-A-GGTCA-----CATC-TT-TATG--TT-C-TGAGAGTTT-GCA--------TTG-T-TAC--AAAAAGT--A---GA------GATA-C-----------------------------------------------------------------------------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 55
s Erythrocebus_patas.Contig38                               262235 163 +  21539334 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCAGCACTGC---A-CA-G-C--ACGG-A-A-GGCA------------CAAG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGACAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---CA------GGGC-TC---AT----GCAAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64561 100 -    133382 ----------------------------------------------------------------------------------------------------------------GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGA-T-TAC--AAATTGC--A---GA------GGTC-CC---AA----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAG-TCAT
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 53 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4780 100 +      7672 ----------------------------------------------------------------------------------------------------------------GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGA-T-TAC--AAATTGC--A---GA------GGCC-CC---AA----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAG-TCAT
i Eubalaena_japonica.EubJap_flattened_line_118172        I 53 C 0
s Eulemur_albifrons.k141_51491                               14147 163 -     24895 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAGTTGC---A-CA-A-T--ACAG-G-A-GCTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGCGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTT--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               41856 163 -     70999 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAGTTGC---A-CA-A-T--ACAG-G-A-GCTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTT--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85818 163 +    112731 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAGTTGC---A-CA-A-T--ACAG-G-A-GCTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTT--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42387 163 +     68309 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAGTTGC---A-CA-A-T--ACAG-G-A-GCTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTT--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52713 163 -     65740 TC--TGTTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAGTTGC---A-CA-A-T--ACAG-G-A-GCTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTT--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23342 163 -     75513 TC--TGTTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAGTTGC---A-CA-A-T--ACAG-G-A-GCTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTT--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47540 163 -     97555 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAGTTGC---A-CA-A-T--ACAG-G-A-GCTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTT--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4264 163 +     30972 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAGTTGC---A-CA-A-T--ACAG-G-A-GCTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ATAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTT--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  41984 163 -     52037 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAGTTGC---A-CA-A-T--ACAG-G-A-GCTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTT--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58386 163 -    111500 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAGTTGC---A-CA-A-T--ACAG-G-A-GCTT------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTT--ATTA-CC-TG-CT-ATGG--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246188 163 - 206538554 TC--TCTTG-GCGT-TTT-TCTTG----TA----------CCG-ACAAGCACCGG---A-CA-G-T--GGAGGG-A-AGCA------------TA-G-GA-C--TGGAA-A-GGTCA-----CATC-TT-CATG--TC-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGTC-CC---AT----GCGGA-AA------------G-ATC--GTTA-CC-TG-CT-Gtgt--------c-----------tctt--g-ttt-t-aaa-aat-tctt
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185115974 163 - 205367284 TC--TCTTG-GCTT-TTT-TCTTG----TA----------CCG-ACAAGCACCGG---A-CA-G-T--GGAGGG-A-AGCA------------TA-G-GA-C--TGGAA-A-GGTCA-----CATC-TT-CATG--TC-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGTC-CC---AT----GCGGA-AA------------G-ATC--GTTA-CC-TG-CT-Gtgt--------c-----------tctt--g-ttt-t-aaa-aat-tctt
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27071 163 -     30238 TC--TCTTG-GCGT-TTT-TCTTG----TA----------CGG-ACAAGCACGGG---A-CA-G-T--GGAGGG-A-AGCA------------TA-G-GA-C--TGGAA-A-GGTCA-----CATC-TT-CATG--TC-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGTC-CC---AT----GCGGA-AA------------G-ATC--GTTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2915837 121 -   3816255 -------------------------------------------------------------------------A-A-GGCA------------CAAG-GA-C--TGAAA-A-GGtcc-----tgtc-tt-tatt--tt-c-tgagaaCTT-GAG--------TGT-T-TAC--AAAGTGC--A---GA------GGTC-TC---AT----GAAGA-AA------------G-ATC--AGTA-Cc-tg-at-atgt--------c-----------ttttttt-ttt-t-caa-cat-tctt
i Fukomys_damarensis.KN121974.1                          N 0 C 0
s Galago_moholi.ctg3793                                     124385  96 -    137831 GC--TATTT-GCCC-CAC-CCCTG----AA----------CCA-AAGAGCACTTT---A-CA-A-T--ACAG-G-G-GACT------------TGAG-GC-C--TTAAA-G-GGTCA-----TGTC-TT-TGTG--CT-C-TGGAAGTTT-TGG--------TGG----------------------------------------------------------------------------------------------------------------------------------------
i Galago_moholi.ctg3793                                  C 0 I 66
s Galago_senegalensis.k141_991736                             7930  96 +     22493 GC--TATTT-GCCC-CAC-CTCTG----AA----------CCA-AAGAGCACTTT---A-CA-A-T--ACAG-G-G-GACT------------TGAG-GC-C--TTAAA-G-GGTCA-----TGTC-TT-TGTG--CT-C-TGGAAGTTT-TGG--------TGG----------------------------------------------------------------------------------------------------------------------------------------
i Galago_senegalensis.k141_991736                        C 0 I 66
s Galagoides_demidoff.k141_561628                            20007  96 -     32986 GC--TATTT-GCCC-CAC-CCCTG----AA----------CCA-AAGAGCACTTT---A-CA-A-T--ACAG-G-G-GACT------------TGAG-GC-C--TTAAA-G-GGTCA-----TGTC-TT-TGTG--CT-C-TGGAAGCTT-TGG--------TGG----------------------------------------------------------------------------------------------------------------------------------------
i Galagoides_demidoff.k141_561628                        C 0 I 66
s Galeopterus_variegatus.GalVar_scaffold_51812                 540 163 -     28519 TC--TACTG-GCAT-TTT-GCTTG----TA----------TCA-ACCAGCACTGT---A-CA-A-C--CTAA-G-A-GGCA------------CAGG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TATG--TT-C-GGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---GA------GGTC-CC---AT----GCAGA-AC------------G-ATC--ATTA-CC-TG-TT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90803 161 -     95226 TC--TATTG-GCAT-TTT-CCTTG----TG----------CCA-ACCAGTGTTGC---A-CA-A-T--GTAG-G-A-AGCT------------CAAG-GA-C--TGAAG-A-GGTCA-----CATT-CT-GATG--TC-C-TGAAAC--T-GAG--------TGA-T-TAC--AAAGTAC--A---GA------AGTC-CC---AT----GAAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TCT-T-CAA-AAG-TCAT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            33873 163 -     36801 TC--TATTG-GCAT-TTT-CCTTG----TA----------CCA-ACCAACGCTGC---A-CG-A-T--CCAG-G-A-GGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTT-TT-TATT--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--GAAGTGC--G---GG------GGCC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-TGT-TCTT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5189 163 -      8343 TC--TGTTG-GCTT-TAT-CC-TGG---CA----------CCG-ACTAGCACTGC---A-CA-G-C--GTAG-A-A-GGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGAAAATTT-GAA--------AGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAAA-AT------------G-CTC--ATTA-TC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254203 163 - 186649187 TC--TGTTG-GTTT-CAT-CC-TGG---CA----------CCG-ACTAGCACTGC---A-CA-G-C--ATAG-A-A-GGCA------------CAAG-GA-C--TGAAA-A-CGTCA-----TGTC-TT-TCTG--CT-C-GGAAAGCTT-GAA--------TGG-T-TGT--AGAGTGC--A---GA------GGGC-CC---AT----GCAAA-AC------------G-CTC--ATTA-TC-TG-CT-GTGT--------C-----------Tctt--g-ttt-t-caa-aat-tctt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1364 165 -     78134 TC--TATTG-GCAT-TTT-CCGTG----TC----------CTA-ACCAGCATTGC---A-GA-A-T--CCAG-G-A-GTCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATT--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--GAAGTGCAGG---GG------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-TAT-TCTT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14072 163 -     40692 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAAAATTGC---A-CA-A-T--ACAC-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35474 163 +     49394 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAAAATTGC---A-CA-A-T--ACAC-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60342 163 -     66874 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAAAATTGC---A-CA-A-T--ACAC-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9216 163 -     42923 TC--TATTG-GTAT-CAT-CCTTG----AA----------CCA-AGCAAAATTGC---A-CA-A-T--ACGC-A-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16216 163 -     53142 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAAAATTGC---A-CA-A-T--ACAC-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30157 164 -    327341 TT--TATTG-ACGG-TTT-GCTTG----TA----------GCG-ACAAGCACCGT---A-CA-G-T--GGACGG-A-AGCA------------CA-G-GA-C--TGGAA-A-GGTCA---C-CATC-TT-CCTG--TC-C-TGAAAGCTT-GAG--------TGG-T-CAC--AGAGTGC--A---GA------GGTC-CC---AT----GCAGC-AA------------G-ATG--ATTC-TT-TG-CT-GTGC--------C-----------TCTT--G-TTT-G-CAA-AAT-TCTT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8499 148 +     48891 --------------------CTTG----TA----------CCA-ACCAGTGTTGC---A-TG-A-T--GTAG-G-A-AGCA------------CAAG-GA-C--TGGAG-A-GGTCA-----CGTC-CT-GATG--TC-C-TGAAACTTT-GAG--------TGA-T-TAC--AAAGCAC--A---GA------AGTC-CC---AT----GAAGA-AA------------G-ACC--ATTA-CC-TG-CT-GTGT--------C-----------CCTT--G-TCT-T-CAA-AAG-TCAT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1931762 163 -  22651954 TCTGT--TG-GCAT-CTT-CCTTG----TA----------CCA-GCCAGCATTTT---A-TA-G-T--AGAG-A-A-GGCA------------CAAG-GA-C--TGAAA-A-Ggtca-----tgtc-tt-tatt--tt-c-tgagaaCTT-GAG--------TGT-T-TAC--AAAGTGC--A---GA------GGCC-TC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-tt-atgt--------c-----------tttt--g-ttt-t-caa-CAT-TCTT
i Heterocephalus_glaber.JH602082.1                       I 12 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_128297                6450 158 +      6687 TG--GGTT--GCGT-TTT-CCTTG----TG----------CTG-GCCGGCTTTGC---A-CA-C-G--GTGG-G-A-GGCC------------CAG---G-C--TGAAA-A-GGTCA-----CATC-TT-CTTG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC---AAGTGC--A---GA------GGCC-CC---TT----GCAGA-AC------------G-ATC--GTCA--C-TG-CT-CCGT--------C-----------TCTT--G-TTT-G-AAA-AAT-TCTT
i Heterohyrax_brucei.HetBruBak_scaffold_128297           C 0 N 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7003 163 -     36432 TC--TATTG-GCAT-TTT-CCTGG----TA----------CCA-ACCAACACTGC---A-CA-A-T--ACAG-G-A-TGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----CATC-CT-TATG--TT-C-TGAAAGCTT-GAA--------TGA-T-TAC--AAAGTGC--A---GA------GGTC-CC---AT----GCAAA-AA------------G-ATC--ATTA-CC-CA-CT-ATGT--------C-----------CCTT--G-TTT-T-AAA-AAG-TCAT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553561 111 -   1711038 ---------------------------------------------------------------------------------------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TATG--TT-A-TGAAAGCTT-GAG--------TGG-T-AAC--AAAGAAC--A---GA------CAT---C---AT----ACAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------Cctt--g-ttt-t-caa-aat-tctt
i Hipposideros_armiger.JXIK01000431.1                    I 36 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                476 111 -      2730 ---------------------------------------------------------------------------------------------CAAG-GA-C--TGAAA-A-GGTCA-----CATC-TT-TATG--TT-A-TGAAAGCTT-GAG--------TGG-T-AAC--AAAGAAC--A---GA------CAT---C---AT----ATAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAT-TCTT
i Hipposideros_galeritus.HipGal_scaffold_164997          I 36 C 0
s Hoolock_leuconedys.ctg274                                    142211 164 -    630532 TC--TCTTG-GCTT-CAT-CCTTGG---CA----------CCG-ACTAGCACTGC---A-CA-G-A--GTAG-A-A-GGCA------------CAGG-GA-C--TGGAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGAAAGCTT-GAA--------TGG-T-TAC--AGAGTGC--A---GA------GGGC-CC---AT----GCAAA-AA------------G-CTC--ATTA-TC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69071 162 +     83186 TC--TACTG-GTGT-TTT-CCTTG----TA----------CCG-ACAAGCACC-T---A-CA-G-T--GGAGGG-A-AGCA------------CA-G-CA-C--TCGAA-A-GGTCC-----CAGC-TT-CCTG--TC-C-TGAAAGCTT-CAG--------TGG-T-TAC--AGAGAGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TATT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71239 164 +    143317 TC--TATTG-GCAT-CTC-CTTTG----TA----------TCA-GCCAGCTCTGT---A-CA-G-T--GCAC-A-A-GGCA------------CTAG-CA-C--TGAAA-A-GGGCA-----TGTC-TT-TATT---T-G-TGAGAACTT-GGA--------TGA-T-TAC--AAATTGC--A---GAG-GGAGGGTC-TC---AT----GCAGA-AA------------G-GTC--ATTA-CC-TG-CT-ATGC--------T-----------TTTT--G-TTT-T-CAG-CC----TT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 8 C 0
s Hylobates_agilis.k141_1155965                               5246 164 +     12352 TC--TCTTG-GCTT-CAT-CCTTGG---CA----------CCA-ACTAGCACTGC---A-CA-G-A--GTAG-A-A-GGCA------------CAGG-GA-C--TGGAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGAAAGCTT-GAA--------TGG-T-TAC--AGAGTGC--A---GA------GGGC-CC---AT----ACAAA-AA------------G-CTC--ATTA-TC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12430 164 +     55766 TC--TCTTG-GCTT-CAT-CCTTGG---CA----------CCG-ACTAGCACTGC---A-CA-G-A--GTAG-A-A-GGCA------------CAGG-GA-C--TGGAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGAAAGCTT-GAA--------TGG-T-TAC--AGAGTGC--A---GA------GGGC-CC---AT----GCAAA-AA------------G-CTC--ATTA-TC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052028 164 + 191637585 TC--TCTTG-GCTT-CAT-GCTTGG---CA----------CCG-ACTAGCACTGC---A-CA-G-C--GTAG-A-A-GGCA------------CAGG-GA-C--TGGAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGAAAGCTT-GAA--------TGG-T-TAC--AGAGTGC--A---GA------GGGC-CC---AT----GCAAA-AA------------G-CTC--ATTA-TC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7800906 164 +  11177569 TC--TCTTG-GCTT-CAT-GCTTGG---CA----------CCG-ACTAGCACTGC---A-CA-G-C--GTAG-A-A-GGCA------------CAGG-GA-C--TGGAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGAAAGCTT-GAA--------TGG-T-TAC--AGAGTGC--A---GA------GGGC-CC---AT----GCAAA-AA------------G-CTC--ATTA-TC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       3861 162 -    135385 TC--TGCTG-GCAT-C-T-TCCTG----TA----------CCA-GCCAGCACTGT---A-CA-G-T--GTAG-G-A-GGCA------------CAAG-GA-C--TGAAA-A-CATCA-----TGTC-TT-TGTT--TT-C-TGAAAACTT-GAG--------TGG-T-TAC--AAAGCAC--A---GA------GGTC-TC---AT----GCAGA-AA------------G-ATC--TTTA-CC-TT-CT-ATGT--------C-----------TTCT--G-TTT-T-CAA-AAT-TCTT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386223 163 +   7955117 TC--TATTG-GCAT-TTT-CCTTG----TA----------CCA-ACCAGCACGGC---A-CA-A-C--GTAG-G-A-GGCA------------CAAG-GA-C--TGTAA-A-Ggtca-----tgtc-tt-tatt--tt-c-tgaaagctT-GAG--------TGG-T-TGC--GGAGTAC--A---GA------GGTC-CC---AT----GCAGA-AA------------C-ATC--ATTA-GC-GG-CT-ATGC--------C-----------TCTT--G-TTT-T-CAA-CAT-CCTT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    1776 163 +     11955 TC--TGTTG-GCAT-CTT-CCTTG----AA----------CCA-AGCAGAATTGC---A-CA-A-T--ACAA-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTTG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                3030 100 -     16823 ----------------------------------------------------------------------------------------------------------------GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGA-T-TAC--AAATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAG-TAAT
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 53 C 0
s Jaculus_jaculus.JH725527.1                               1239347  19 +   9596543 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNNN--N-NNN-N-NNN-NAT-TCTT
i Jaculus_jaculus.JH725527.1                             I 412 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65280 100 -     97402 ----------------------------------------------------------------------------------------------------------------GGTCA-----CATC-TT-TCTG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CC-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAG-TCAT
i Kogia_breviceps.KogBre_flattened_line_3970             I 53 C 0
s Lagothrix_lagothricha.k141_246028                          42644 163 +    110728 TC--TGTTG-GCAT-CAT-CCTTG----CA----------CCT-GCTAGCATTGT---A-TA-G-C--ACGG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TATG--CT-C-TGAAAGCTT-CAG--------TGG-T-TAT--AGAACGC--G---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CC-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62300  86 -     65777 TC--TATTG-GCCC-TTC-GCTTG----TA----------TCA-GCCAGCACTGC---A-CA-G-C--ATAG-G-A-AGCA------------CCAG-GA-A--TGAAA-A-GATCA-----CATC-CT-TATG--TT-C-TGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_16567                I 51 I 60
s Lemur_catta.scaffold_24                                 14758865 163 +  30322482 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAAAATTGC---A-CA-A-T--ACAC-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3557 163 -     13097 TC--TGTTG-GCAT-CAT-CCTTG----CA----------CCT-ACTAACATTGT---A-TT-G-C--ACAG-A-A-AGCA------------GAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGCC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3311 163 +      5940 TC--TGTTG-GCAT-CAT-CCTTG----CA----------CCT-ACTAACATTGT---A-TT-G-C--ACAG-A-A-AGCA------------GAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGCC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3141 163 -      5717 TC--TGTTG-GCAT-CAT-CCTTG----CA----------CCT-ACTAACATTGT---A-TT-G-C--ACAG-A-A-AGCA------------GAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGCC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9517 163 -     11567 TC--TGTTG-CCAT-CAT-CCTTG----CA----------CCT-ACTAACATTGC---A-TT-T-C--ACAG-A-A-AGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTCC--A---GA------GGCC-GC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         10898 163 -     12945 TC--TGTTG-CCAT-CAT-CCTTG----CA----------CCT-ACTAACATTGC---A-TT-T-C--ACAG-A-A-AGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTCC--A---GA------GGCC-GC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8379 164 +     29618 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAATTGC---A-CA-A-T--ACAG-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-AAG--------TGG-T-TAT--ACAGTGC--A---GA-----AGGTC-CC---AT----GCACA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8375 164 +     31569 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAATTGC---A-CA-A-T--ACAG-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TATC-TT-TATG--CT-C-TGAAAGCTT-AAG--------TGG-T-TAT--ACAGTGC--A---GA-----AGGTC-CC---AT----GCACA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8386 163 +     24756 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAATTGT---A-CA-A-T--ACAG-G-A-GGTT------------CGAG-AA-T--TGTAA-A-GGTCG-----TGTC-TT-TATA--CT-C-TGAAAGCTT-GAG--------TAG-T-TAT--ACAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8385 164 +     16388 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAATTGC---A-CA-A-T--ACAG-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TATC-TT-TATG--CT-C-TGAAAGCTT-AAG--------TGG-T-TAT--ACAGTGC--A---GA-----AGGTC-CC---AT----GCACA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        812890 163 -   3914936 TC--TATAG-GTGT-TTT-CCTTT----TA----------CCA-ACCAGCACTGC---A-CA-A-T--GGAG-G-A-AGCA------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-CTC--AAAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-CG-CT-GTGT--------c-----------tctt--g-ttt-t-caa-aat-tctt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17250 133 +     24238 ----TATTG-GCAT-TTT-CCTTG----TA----------CCA-ACCATTGATAC---A-CA-A-T--ATAA-G-A-TACA------------CAAG-GA-C--TTTCA-A--GTCA-----TAAC-TA-TTTTTTTTTC-TGAA--CTT-GAG--------TGG-T-TAG--AAAGTGA--A---AA------AGTC-CC---AC----CCAGA-AA------------G-TCC--ATTA-CG---------------------------------------------------------
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 25
s Lipotes_vexillifer.KE559953.1                             334566 100 +    662738 ----------------------------------------------------------------------------------------------------------------GATCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGA-T-TAC--AAATTGT--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAG-TAAT
i Lipotes_vexillifer.KE559953.1                          I 53 C 0
s Lophocebus_aterrimus.ctg367                               333305 121 -   1826925 ----------------------------------------------------------------------AG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Lophocebus_aterrimus.ctg367                            I 32 C 0
s Loris_lydekkerianus.k141_2031736                            9966  96 +     19643 GC--TGTTT-GCAC-CAC-CCCTG----AA----------CCA-AAGCACACTGC---A-CA-A-T--ACAG-G-G-GACT------------TGAG-GC-C--TTAAA-T-GGTCA-----TGTC-TT-TGTG--CT-C-TGGAAGCTT-CAG--------TGG----------------------------------------------------------------------------------------------------------------------------------------
i Loris_lydekkerianus.k141_2031736                       C 0 I 64
s Loris_tardigradus.ctg83                                  5043629  96 -   6120653 GC--TATTT-GCAC-CAC-CCCTG----AA----------CCA-AAGCACACTGC---A-CA-A-T--ACAG-G-G-GACT------------TGAG-GC-C--TTAAA-T-GGTCA-----TGTC-TT-TGTG--CT-c-tggaagctt-cag--------tgg----------------------------------------------------------------------------------------------------------------------------------------
i Loris_tardigradus.ctg83                                C 0 I 64
s Loxodonta_africana.GL010049.1                           39080395 162 +  43346337 TC--TATT--GCAT-TTC-CCTCG----TA----------CTA-GCTGGCTTTGC---A-CA-A-T--ACAG-G-A-CATA------------CAAA-GA-C--CAAAA-A-GGTCA-----TGTC-TT-TTTG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--GAAGCAT--G---GA------GGTT-CT---GT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-CTGG--------C-----------TCTT--G-TCT-G-CAA-AAT-TCTT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614029 160 +  59628241 TC--TATAG-GTGT-TTT-CCTTG----TA----------CCA-ACCAGCAGTGA---A-CA-A-T--GGAG-G-A-AGCA------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-AATA--TT-T-TGAAAGCTT-GAG--------TGG-T-TAC--AAAATGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGt--------c--------------t--g-ttt-t-caa-aat-tctt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44657 163 -     61512 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372319 163 -  60120075 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24582 163 +     30207 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TTTT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21685 163 -     24934 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TTTT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24535 163 +     30527 TC--TGTTG-GCTT-CAT-CCTTA----AG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TTTT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35711 163 -     50087 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45455 163 +     51645 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CGAG-GA-C--TCCAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414657 163 - 187317192 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------c-----------tctt--g-ttt-t-caa-aat-tttt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              398888 163 +  25927173 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGt--------c-----------tctt--a-ttt-t-caa-aat-tctt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48060 163 -     62418 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CGAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  598 163 +     14901 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44532 163 +     59329 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270440 163 +    668171 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGC-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  716 163 +      1732 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2238 163 +     17132 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTAGCACTGC---A-CA-G-C--ACGG-A-A-GGCA------------CGAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222585 162 -    270270 TC--TATTG-GCAT-TTT-CCTTA----TA----------C-A-ACCAGCATTGC---A-CG-A-T--ATAG-G-T-GTCA------------CAAG-GA-C--TGAAA-A-GATCA-----CATC-TT-TATG--TT-C-TGAAACCTT-GAG--------TGG-T-TAC--AAAGTGC--A---GC------AGTC-TC---AT----GCAAA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTC--A-TTT-T-CAA-AAT-TCTT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321769 121 +  24302211 ----------------------------------------------------------------------AG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Mandrillus_leucophaeus.scaffold280                     I 32 C 0
s Mandrillus_sphinx.Contig270                               356601 120 -    752769 ----------------------------------------------------------------------AG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GC-AA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Mandrillus_sphinx.Contig270                            I 32 C 0
s Manis_javanica.JSZB01003497.1                             672941 160 -    737560 TC--TTTTG-GCAT-TTT-CCCCG----TA----------CCA-ACTAACATCAC---A-CA-T-C--GTAG-G-A-AGCA------------CAAG-GA-C--TG-AA-A-GGTCG-----CATC-TT-TTCG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---GA------GGTC-TT---AT----GC--A-AA------------G-ATC--ATTA-CC-TG-CT-ATGg--------c-----------tctt--c-ttt-t-caa-aat-tact
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220229 160 +    317179 TC--TTTTG-GTAT-TTT-CCCCT----TA----------CCA-ACTAACATCAC---A-CA-T-C--ATAG-G-A-AGCA------------CAAG-GA-C--TG-AA-A-GGTCA-----CATC-TT-TTCG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---GA------GGTC-TT---AT----GC--A-AA------------G-ATC--ATTA-CC-TG-CT-ATGg--------c-----------tctt--c-ttt-t-caa-aat-tact
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500443 163 +  40650429 TC--TATTG-GCAT-TTT-CCTTG----TA----------CCA-ACCAGCACGGC---A-CA-A-C--GTAG-G-A-GGCA------------CAAG-GA-G--TGTAA-A-GGTCA-----ggtc-tt-tatt--tt-c-tgaaagctT-GAG--------TGG-T-TGC--GGAGTGC--A---GA------GGTC-CC---GT----GCAGA-AA------------C-ATC--ATTA-GC-GG-CT-ATGC--------C-----------TCTT--G-TTT-T-CAA-CAT-TCCT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       149785 138 +    207569 GC--TATTG-GCAT-TTT-CCTTA----TA----------CCA-ACAAGCG--GC---A-CA-A-T--ATAG-G-A-AGCA------------CAAG-GT-C--TCCAA-A-GGTCA-----CATC-TT-TGTA--TT-A-TGAAAGCCT-GAG--------TGC-T-TAC--AAAGTAC--A---GA------GGT---C---AT----GCAGA-AA------------G-ACC--ATTA-CC-TG-TT-ATG-----------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 14
s Mellivora_capensis.MelCap_flattened_line_19308             25579 163 -     74585 TC--TATAG-GTGT-TTT-CCTTT----CA----------CCA-ACCAGCACTGA---A-CA-A-T--GGAG-G-A-AGCA------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TTC--AAAGTGC--A---GA------GGTC-CC---GT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49526 162 -    140813 TC--TGTTG-GCAT-TTC-CATTG----TA----------CCC-A-CAGCAAAGC---C-CA-A-C--ACAG-A-A-GACA------------CA-G-GGCC--TGAAA-A-GGTCA-----TGTC-TT-TATT--TT-C-TGAAAGCCT-GAG--------TGC-T-TCC--TAAGTGC--A---GA------GTTC-CT---CA----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ACTC--------C-----------CCTT--G-TTT-T-AAA-TAT-TCTT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428620 161 +  29670104 TC--TATTG-GCAG-GTT-CATTG----TA----------CCC-A-CAGTAAGGC---A-TG-A-C--ACAG-G-A-GGCA------------CA-G-GG-C--TGAGA-A-GGTCA-----CATC-TT-TATT--TT-C-TGGAAGCTT-GAG--------TGC-T-TCC--TAAGTGC--A---GA------AGCC-CT---CT----ACAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-TAT-TCTT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80865 100 +     93471 ----------------------------------------------------------------------------------------------------------------GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGA-T-TAC--AAATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--A-TTT-T-CAA-AAG-TAAT
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 53 C 0
s Mico_argentatus.k141_582562                                 9683 162 +     17804 TC--CGTTG-GCAT-CAT-CCTTG----CA----------CCT-ACCAGCATTGT---A-TT-T-C--ACAG-A-A-AGCA------------CAAG-GA-A--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GGG--------TGG-T-TAT--AGAGTGC--A---GA------GGCC--C---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10185 162 -     12984 TC--CGTCG-GCAT-CAT-CCTTG----CA----------CCT-ACCAGCATTGT---A-TT-T-C--ACAG-A-A-AGCT------------CAAG-GA-A--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GGG--------TGG-T-TAT--AGAGTGC--A---GA------GGCC--C---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAG-AAT-TCTT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18499 162 -     26561 TC--CGTTG-GCAT-CAT-CCTTG----CA----------CCT-ACTAGCATTGT---A-TT-T-C--ACAG-A-A-AGCA------------CAAG-GA-A--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GGG--------TGG-T-TAT--AGAGTGC--A---GA------GGCC--C---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74983987 164 +  93316391 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAATTGC---A-TA-A-T--ACAG-G-A-GGTT------------TGAG-GA-C--TGAAA-AAGGTCC-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CT---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-CCTT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45529 162 +    145209 TC--TATTG-GCAT-TTT-CCTTG----TA----------GCA-ACCAGCTTTAC---G-CA-A-T--ACAG-G-A-GACA------------CAGA-GA-C--TGAAA-A-GGTCA-----TGTC-TT-T--T--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--GAAGTGC--A---GA------GGTC-CC---AC----GCAGA-AA------------G-ATC--ATTC-CC-TG-CC-TTGG--------C-----------TGTT--GCTTT-T-CAA-AAT-TCTT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184503 148 +    200668 TC--TATTG-GCAT-TTT-CCTTG----TA----------CGA-GCCAGCATTATAGTG-CA-G-T--ACAG-G-T-AGCA------------CAAG-GA-C--CAAA--A-GGTCA-----TATC-TT-TAAG--TT-C-TGAAAGCTG-GAG--------TGG-T-TAC--AAAGTGC--A---CA------GGCC-TTGTGAT----GCATA-AA------------G-ATC--TTTC-AT-TG-CT-GTGT----------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 19
s Microtus_ochrogaster.CM001695.1                         15961825 161 +  27267610 TC--TATTG-GCAT-GTT-CCTTG----TG----------CCC-A-CAGCAAGGC---A-CA-A-C--ACAG-G-A-GGCA------------CA-G-GG-C--TGAAA-A-GGTCA-----CGTC-TT-TATT--TT-C-TGAACGCTT-GAG--------TGC-T-TCC--TAAGTGC--A---GA------GGTC-CT---TT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-CTGT--------C-----------CCTT--G-TTT-T-CAA-TAT-TCTT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362630 163 -   8254450 TC--TCTTG-GCAT-TTT-CCTTG----TA----------TCA-ACCTGTATTGC---A-CA-A-T--GCAG-G-A-AGCT------------CAAG-GA-C--TGAAA-A-GGTCA-----CATC-TT-TATG--TT-T-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTAC--A---TA------GGTC-CC--A-T----GCAGA-AA------------G-ATC--ATTA-CT-TG-CT-ATGT--------C-----------cctt--g-ttt-t-caa-aat-tctt
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41537 163 -     48117 TC--TCTTG-GCAT-TTT-CCTTG----TA----------TCA-ACCTGTATTGC---A-CA-A-T--GCAG-G-A-AGCT------------CAAG-GA-C--TGAAA-A-GGTCA-----CATC-TT-TATG--TT-T-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTAC--A---TA------GGTT-CC--A-T----GCAGA-AA------------G-ATC--ATTA-CT-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAT-TCTT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21745 162 -     27822 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACCAGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CGAG-GA-C--CC-AA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------CGG-T-TAT--AGAGTGC--A---GA------CGGC-TC---AT----GCAAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-ACT-TCTT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         7897 163 +     27589 TC--TATAG-GTGT-TTT-CCTTT----TA----------CCA-ACCAGCACTGC---A-CA-A-T--GGAG-G-A-AGTA------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-CTC--AAAATGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-CG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51784 163 -     62432 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCA-AGCAGAATCAC---A-TA-A-T--ATAG-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--GCAGTGC--A---GA------GGTC-CT---AA----GTAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCCT--G-TTT-T-CAA-AAT-CCTT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   352964 100 +    437263 ----------------------------------------------------------------------------------------------------------------GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGA-T-TAC--AAATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAG-TAAT
i Monodon_monoceros.MonMon_M_scaffold_103                I 53 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178672 179 +    366855 TC--TACTG-GCAT-TTC-CCTTG----TAAGGGAAATCACCA-AGCAGCATTATAGCG-CA-G-C--ACAG-G-T-AGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----CATC-TC-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---CA------GGCC-TCATGAC----ACACA-AA------------G-ACC--ATTA-CC-GG-CT-CTGT--------C-----------CCTT--G-TTT-T-CAA-AAT-TCTT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  24922 160 -     82753 TC--TG----TCAT-TTT-CCTTG----TA----------CCC-ACAAGTGTTGC---A-CA-A-T--GCAG-G-A-AGCA------------GAAG-GA-C--TGAAA-A-GGTCA-----CATT-CT-GATG--TC-C-TGAAACCTT-GAG--------TGA-C-TAC--AAAGTAC--A---GA------AGTC-CC---AT----GAAGA-AA------------A-ATC--ATTA-CC-TG-CT-GTGT--------C-----------CCTT--G-TCT-T-CAA-AAG-TCGT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   17909 163 -     63510 TT--TATTG-ACGT-TTT-GCTTG----TA----------CCG-ACAAGCACCGT---A-CA-G-T--GGACGG-A-AGCA------------CA-G-GA-C--TGGGA-A-GGTCA-----CGTC-TT-CCTG--TC-C-TGAAAGCTT-GAG--------TGG-T-CAC--AGAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTT-CC-TG-CT-GTGC--------C-----------TCTT--G-TTT-G-CAA-AAT-TCTT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38598 162 +     47283 TC--TATTG-GCAT-TTC-CCTCG----TA----------TCA-GCCCTCATTGC---A-CA-C-C--ATAG-G-A-AGCA------------CA-G-GA-T--TGAAA-A-GATCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------CAG-T-TAC--AAAGAGC--A---TA------GGTC-CCG---T----GCAGA-AA------------G-ATC--ATTA-CT-TG-CT-ACGT--------C-----------CCTT--G-TTT-T-CAA-AAT-TCTT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592556 161 + 120012414 TC--TATTG-GCAT-TTC-CATTG----GA----------CCC-A-CAGCAAGGC---A-CA-A-C--ACAG-G-A-GGCA------------CA-G-GG-C--TTCAA-A-Ggtca-----tgtc-tt-tatt--tt-c-tgaaagtta-GAG--------TGC-T-TGC--TAAGAGC--A---GA------AGTC-CT---CT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CC-ACAT--------C-----------CCTT--G-TTT-T-AAA-CAC-TCTT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41686941 161 + 129401213 TC--TATTG-GCAT-TTC-CACTG----GA----------CCC-A-CAGCAAGGC---A-CA-A-C--ACAG-G-A-GGCA------------CA-G-GG-C--TGCAA-A-ggtca-----tttc-tt-tatt--tt-c-tgaaagCTA-GAG--------TGC-T-TCC--TAAGAGC--A---GA------AGTC-CT---CT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CC-ACGT--------C-----------CCTT--G-TTT-T-AAA-CAC-TCTT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58216808 128 +  89631738 TC--TATTG-ACAT-TTC-TGTTG----GA----------CCC-A-CAGCAAGGC---A-CA-A-C--GCAG-G-A-GGCA------------CA-G-GA-C--TGCAA-A-GGTCA-----CATG-TT-TATT--TT-C-TGAAAGCTA-GAG--------TGC-T-TCC--TAAGAGC--A---GA-C----TGTC-CT---CT----GCAGA-Aa------------g-atc------------------------------------------------------------------
i Mus_pahari.LT608297.1                                  C 0 I 721
s Mus_spretus.CM004101.1                                  39496237 161 + 130317789 TC--TATTG-GCAT-TTC-CATTG----GA----------CCC-A-CAGCAAGGC---A-CA-A-C--ACAG-G-A-GGCA------------CA-G-GG-C--TGCAA-A-ggtca-----tttg-tt-tatt--tt-c-tgaaagCTA-GAG--------TGC-T-TCC--TAAGAGC--A---GA------AGTC-CT---CT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CC-ACAT--------C-----------CCTT--G-TTT-T-AAA-CAC-TCTT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82702 163 -     86153 TC--TATTG-GCAT-TTT-CCTTG----TA----------CAA-ACCAGCACTGC---A-CA-A-T--CCAG-G-A-GGCA------------CAGG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATT--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--GAAGTGT--G---GG------GGCC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-TAT-TCTT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354507 168 +  14710649 TC--TATAG-GTGT-TTT-CCTTT----CA----------CCGGACCAGCACTGA---A-CA-A-T--GGAG-G-A-AGCG------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TTC--AAAGTGC--A---GA------GGTC-CC---GTGCGTGCAGA-AA------------G-ATC--ATTA-CC-TG-CT-GTGT--------c-----------tctt--g-ttt-t-caa-aat-tctt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     62596  98 +     67721 ------------------------------------------------------------------------------------------------------------------GTC-----TGCC-TT-TATT-GTT-C-TGGGATCTT-GAG--------TGA-T-TAA--AAATTGT--G---GG------AGTC-TC---CT----GCAGA-AA------------G-ATC--ATTA-C--TG-TC-ATCC--------C-----------TTTT--G-TCT-T-TAA-CAT-TGTT
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 59 C 0
s Myotis_brandtii.KE162005.1                               9792884 163 +  10118263 TC--TATTG-GCAT-TTC-CCTTG----TA----------TCA-GCCCGCATTGC---A-CA-C-C--CTAG-G-A-AGCA------------CAAG-GA-C--TGAAA-A-GATCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------CGG-T-TAC--AAAGCAC--A---TA------GGTC-CC--A-C----GCAGA-AA------------G-ATC--ATTA-C-TTG-CT-ATGT--------C-----------cctt--g-ttt-t-caa-aat-tctt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387014 162 +   6019432 TC--TACTG-GCAT-TTC-CCTTG----TA----------TCA-GCCCGCAGTGC---A-CA-C-C--CTAG-G-A-AGCA------------CAAG-GA-C--TGAAA-A-GATCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------CGG-T-TAC--AAAGCGC--A---TA------GATC-CC--A-C----GCAGA-AA------------G-ATC--ATTA-C--TG-CT-ACGT--------C-----------Cctt--g-ttt-t-caa-aat-tctt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               382841 163 +   4330536 TC--TATTG-GCAT-TTC-CCTTG----TA----------TCA-GCCCGCATTGC---A-CA-C-C--CTAG-G-A-AGCA------------CAAG-GA-C--TGCAA-A-GATCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------CGG-T-TAC--AAAGCGC--A---TT------GGTC-CC--A-C----GCAGA-AA------------G-ATC--ATTA-C-TTG-CT-ACGT--------C-----------cctt--g-ttt-t-caa-aat-tctt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1653 159 +     18357 TC--T--TG-GCAT-TTC-CCTTG----TA----------TCA-GCCCGCAGTGC---A-CA-C-C--CT-G-G-A-AGCA------------CAAG-GA-C--TGAAA-A-GATCA-----CATC-TT-TATA--TT-C-TGAAAGCTT-GAG--------CAG-T-TAC--AAAGCAC--A---TA------GGTC-CC--A-T----GCAGA-AA------------G-ATC--ATTA-C--TG-CT-ACGT--------C-----------CCTT--G-TTT-T-CAA-AAT-TCTT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119137 163 +    130748 AC--TATTG-GCAT-TTC-CCTTG----CA----------CCA-ACCAGAATTGC---C-TA-A-T--GTAG-T-A-GACA------------CAGG-GT-C--TGAAA-A-GGACA-----CGTC-TT-TATG--TT-C-TGGAAGCTT-GAG--------CAG-T-TAC--AGAGTGC--A---GA------AATC-TC---AT----GCAAG-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------T-----------CCTT--G-TTT-T-CAA-AAT-TCTT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945711 123 +   3037898 ---------------------------------------------------------------------TGG-G-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTca-----catc-ttttctt--tt-c-tgagaactT-GAG--------TGA-C-TTG--GAAATGC--A---GA------GGTC-CT---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CC-ATGG--------C-----------CCTT--G-TTT-T-CAA-TAT-CCTT
i Nannospalax_galili.KL204047.1                          I 34 C 0
s Nasalis_larvatus.k141_1350636                              28386 163 +     34575 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-CGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468492  97 -  31847680 TC--TATAG-GTGT-TTT-CCTTT----TA----------CCA-ACCAGCACTGC---A-CA-A-T--GGAG-G-A-AGCA------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T--------------------------------------------------------------------------------------------------------------------------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1227134 100 -   7148211 ----------------------------------------------------------------------------------------------------------------GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGA-T-TAC--AAATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAG-TAAT
i Neophocaena_asiaeorientalis.KZ687982.1                 I 53 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127620 168 -    149072 TC--TATTG-GCAT-TTT-TCCTG----TA----------TCG-ACCAGCATTACAGCA-TA-A-T--GCAG-G-T-AGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----CATC-TT-TTTG--TT-C-TAAAAGCTT-GAG--------TGG-T-TGC--AAAGTGC--A---TA------GGCC-TCATGAC----GCACA-A-------------C-ATC--ATTA-CT-TG-CT-CTGT--------C-----------CCTT--G-TTT-T-AAA-AAT-TCTT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53139 164 -    132029 TC--TCTTG-GCTT-CAT-CCTTGG---CA----------CCG-ACTAGCACTGC---A-CA-G-A--GTAG-A-A-GGCA------------CAGG-GA-C--TGGAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGAAAGCTT-GAA--------TGG-T-TAC--AGAGTGC--A---GA------GGGC-CC---AT----GCAAA-AA------------G-CTC--ATTA-TC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9234 164 -     16345 TC--TCTTG-GCTT-CAT-CCTTGG---CA----------CCG-ACTAGCACTGC---A-CA-G-A--GTAG-A-A-GGCA------------CAGG-GA-C--TGGAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGAAAGCTT-GAA--------TGG-T-TAC--AGAGTGC--A---GA------GGGC-CC---AT----GCAAA-AA------------G-CTC--ATTA-TC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15119 164 +     22201 TC--TCTTG-GCTT-CAT-CCTTGG---CA----------CCG-ACTAGCACTGC---A-CA-G-A--GTAG-A-A-GGCA------------CAGG-GA-C--TGGAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGAAAGCTT-GAA--------TGG-T-TAC--AGAGTGC--A---GA------GGGC-CC---AT----GCAAA-AA------------G-CTC--ATTA-TC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413340 164 -  22158432 TC--TCTTG-GCTT-CAT-CCTTGG---CA----------CCG-ACTAGCACTGC---A-CA-G-A--GTAG-A-A-GGCA------------CAGG-GA-C--TGGAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGAAAGCTT-GAA--------TGG-T-TAC--AGAGTGC--A---GA------GGGC-CC---AT----GCAAA-AA------------G-CTC--ATTA-TC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25517 164 -     54323 TC--TCTTG-GCTT-CAT-CCTTGG---CA----------CCG-ACTAGCACTGC---A-CA-G-A--GTAG-A-A-GGCA------------CAGG-GA-C--TGGAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGAAAGCTT-GAA--------TGG-T-TAC--AGAGTGC--A---GA------GGGC-CC---AT----GCAAA-AA------------G-CTC--ATTA-TC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197623 160 +   9404916 TC--TATAG-GTGT-TTT-CCTTG----TA----------CCA-ACCAGCAGTGA---A-CA-A-T--GGAG-G-A-AGCG------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-AATA--TT-T-TGAAAGCTT-GAG--------TGG-T-TAC--AAAATGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGt--------c--------------t--g-ttt-t-caa-aat-tctt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93635986  96 + 196305487 GC--CATTT-GCAC-CAC-CCCTG----AA----------CCA-AAGCACACTGC---A-CA-A-T--ACAG-G-G-GACT------------TGAG-GC-C--TTAAA-T-GGTCA-----TGTC-TT-TGTG--CT-c-tggaagctt-cag--------tgg----------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 I 66
s Nycticebus_coucang.k141_3846325                             2740  96 -      3937 GC--CATTT-GCAC-CAC-CCCTG----AA----------CCA-AAGCACACTGC---A-CA-A-T--ACAG-G-G-GACT------------TGAG-GC-C--TTAAA-T-GGTCA-----TGTC-TT-TGTG--CT-C-TGGAAGCTT-CAG--------TGG----------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_coucang.k141_3846325                        C 0 I 66
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564245  96 - 199412804 GC--CATTT-GCAC-CAC-CCCTG----AA----------CCA-AAGCACACTGC---A-CA-A-T--ACAG-G-G-GACT------------TGAG-GC-C--TTAAA-T-GGTCA-----TGTC-TT-TGTG--CT-C-TGGAAGCTT-CCG--------TGG----------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 66
s Ochotona_princeps.JH802162.1                             2550574 136 -   3988456 TG--CATTG-GTGC-TTT-CCTTG----TA----------CGA-ACCGGTGTTAC---A-CA-A-T--ATAT-G-A-AGCG------------CAAG-GA-C--AGAAA-G-GGTCA-----TGTC-TT-TATT--TC-C-TGAG--CTT-GAG--------AAG-T-NNN--NNNNNNN--N---NN------NNNN-NN---NN----NNNNN-NN------------N-NNN--NNNN-NN-NN-N----------------------------------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 5994
s Octodon_degus.JH651603.1                                11054506 116 -  11899542 TC--TAGTG-GCAT-CTT-CCTTA----TA----------CCA-GCCAGCACTGT---A-CA-G-T--GTAG-C-A-GGCA------------CAAG-GA-C--TGAAA-A-GGATC-----TATC-TT-TATT--TT-C-TGGGAACTT-GAG--------TGA-T-TTC--AAAGTGT--G---AG------GGTC-TC----------------------------------------------------------------------------------------------------
i Octodon_degus.JH651603.1                               I 3 I 24
s Odobenus_rosmarus.KB229312.1                             1451089 163 +   2017862 TC--TATAG-GTGT-TCT-CCTTT----TA----------CCA-ACCAGCACTGC---A-CG-A-T--GGAG-G-A-ATCA------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-TATG--TT-C-TGAGAGCTT-GAG--------TGG-T-TTC--AAAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-GTGT--------c-----------tctt--g-ttt-t-caa-aat-tctt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435687 163 -    630418 TC--TATTG-TCAT-TTT-TCTTG----TA----------CCA-ACCAGTGTTCC---A-CA-A-T--GTAG-G-A-AGCA------------CAAG-GA-C--TGAAG-A-GATCA-----CATT-CT-GATG--TC-C-TGAAACCTT-GAG--------TGA-T-TAC--AAAGTAC--A---GA------AGTT-CC---AT----GAAGA-AA------------G-ATC--ATTA-CC-TG-CT-TTGT--------C-----------CCTT--G-TCT-T-CAA-AAG-TCAT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13687 135 +    150152 TC--TATTG-GCAT-TTT-CCTTG----TG----------CCA-ACCAGTGTTGC---A-CA-A-T--GTAG-G-A-AGCA------------CTAG-GA-C--TGAAG-A-GGTCA-----CATT-CT-GATG--TC-C-TGAAACCTT-GAG--------TGA-T-TAC--AAAGTAC--A---GA------AGTC-CC---AT----GAAGA-AA------------G-ATC--ATTA-CC---------------------------------------------------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 25
s Ondatra_zibethicus.OndZib_scaffold_7387                    92182 160 -    140218 TC--TATTG-GCAT-GTT-CCTTG----TA----------TGC-A-CAGCAAGGC---A-CA-G-C--ACAG-G-A--GCA------------CA-G-GG-C--TTAAA-A-GGTCA-----TGTC-TT-TATT--TT-C-TGAAAGCTC-GAG--------TGC-T-TCC--TAAGTGC--A---GA------GGTC-CT---TT----GCGGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-TAT-TCTC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3062 161 -     41509 TC--TATTG-GCAT-GTT-CGTTG----TA----------CCC-A-CAGCAAGGC---A-CA-G-C--CCAG-G-A-AGCT------------CA-G-GG-C--TGAAA-A-GGTCA-----TGTC-TT-TACT--TT-C-TGAAAGCTT-GAG--------CGC-G-TCC--TAAGTGC--A---GA------AGTC-CT---TT----GCAGA-AA------------G-ATC--ATTA-CT-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-GAA-TAT-TCTT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096416 100 +  10937097 ----------------------------------------------------------------------------------------------------------------GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGA-T-TAC--AAATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ACGT--------C-----------CCTT--G-TTT-T-CAA-AAG-TAAT
i Orcinus_orca.KB316932.1                                I 53 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13237 163 -     14239 TC--TATTG-GCAT-TTC-CCTTG----TA----------CCA-ACCAGCCTTGC---A-CA-A-T--ACAG-G-A-GACA------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-CTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103044 132 - 174332312 ----TATTG-GCAT-TTT-CCTTG----TA----------CCA-ACCACTGATAC---A-CA-A-T--ATAA-G-A-GACA------------CAAG-GA-C--TTTAA-A-GGTCT-----TAAC-TA-TTTT--TTCC-TGAA--CTT-GAG--------TAG-T-TAG--AAAGTGA--A---AA------AGTC-CC---AC----CCAGA-AA------------G-TCC--ATTA-CC---------------------------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 25
s Otocyon_megalotis.JAEUCK010005147.1                        38669 160 +    559221 TC--TATAG-GTGT-TTT-CCTTG----TA----------TCA-ACCAGCAGTGA---A-CA-A-T--GGAG-G-A-AGCA------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-AATA--TT-T-TGAAAGCTT-GAA--------TGG-T-TAC--AAAATGC--A---GA------GGTC-CT---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGt--------c--------------t--g-ttt-t-caa-aat-tctt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39546  96 -     51505 GC--TATTT-GCCC-CAC-CCCTG----AA----------CCA-AAGAGCACTTT---A-CA-A-T--ACAG-G-G-GACT------------TGAG-GC-C--TTAAA-G-GGCCA-----TGTC-TT-TGTG--CT-C-TGGAAGCTT-TGG--------TGG----------------------------------------------------------------------------------------------------------------------------------------
i Otolemur_crassicaudatus.k141_649260                    C 0 I 66
s Otolemur_garnettii.GL873799.1                             352549  96 +   1103335 GC--TATTT-GCCC-CAC-CCCTG----AA----------CCA-AAGAGCACTTT---A-CA-A-T--ACAG-G-G-GACT------------TGAG-GC-C--TTAAA-G-GGTCA-----TGTC-TT-TGTG--CT-C-TGGAAGCTT-TGG--------TGG----------------------------------------------------------------------------------------------------------------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 I 66
s Ovis_aries.CM001607.2                                   26403619 148 -  44047080 --------------------cttG----TA----------CCA-ACCAGTGTTGC---A-TG-A-T--GTAG-G-A-AGCA------------CAAG-GA-C--TGGAG-A-GGTCA-----CGTC-CT-GATG--TC-C-TGAAACTTT-GAG--------TAA-T-TAC--AAAGCAC--A---GA------AGTC-CC---AT----GAAGA-AA------------G-ACC--ATTA-CC-TG-CT-GTGT--------C-----------CCTT--G-TCT-T-CAA-AAG-TCAT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4138 148 +     17875 --------------------CTTG----TA----------CCA-ACCAGTGTTGC---A-TG-A-T--GTAG-G-A-AGCA------------CAAG-GA-C--TGGAG-A-GGTCA-----CGTC-CT-GATG--TC-C-TGAAACTTT-GAG--------TAA-T-TAC--AAAGCAC--A---GA------AGTC-CC---AT----GAAGA-AA------------G-ACC--ATTA-CC-TG-CT-GTGT--------C-----------CCTT--G-TCT-T-CAA-AAG-TCAT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             11831 170 -     26668 TC--TGTTG-GCTT-TAT-CC-TGG---CAA-------C-CCG-ACTAGCACTGC---A-CA-GGCTAGTAG-A-A-GGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC--T-TCTG--CT-C-GGAAAATTTGGAA--------TGGTT-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAAA-AT------------GCCTC--ATTA-TC-TGCCT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TC-T
i Pan_troglodytes.NBAG03003091.1                         I 156 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   23896 163 -    230217 TC--TCTTG-GCGT-TTT-TCTTG----TA----------CCT-ACAAGCACCGG---A-CA-G-T--GGAGGG-A-AGCA------------TA-G-GA-C--TGGAA-A-GGTCA-----CATC-TT-CATG--TC-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGTC-CC---AT----GCGGA-AA------------G-ATC--GTTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461222 163 -  18783137 TC--TCTTG-GCGT-TTT-TCTTG----TA----------CCT-ACAAGCACCGG---A-CA-G-T--GGAGGG-A-AGCA------------TA-A-GA-C--TGGAA-A-GGTCA-----CATC-TT-CATG--TC-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGTC-CC---AT----GCGGA-AA------------G-ATC--GTTA-CC-TG-CT-GTGT--------c-----------tctt--g-ttt-t-caa-aat-tctt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3971881 163 +   8748460 TC--TCTTG-GCGT-TTT-TCTTG----TA----------CCT-ACAAGCACCGG---A-CA-G-T--GGAGGG-A-AGCA------------TA-G-GA-C--TGGAA-A-GGTCA-----CATC-TT-CATG--TC-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGTC-CC---AT----GCGGA-AA------------G-ATC--ATTA-CC-TG-CT-GTGT--------c-----------tctt--g-ttt-t-caa-aat-tctt
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615119 163 +   2937107 TC--TATTG-ACAT-TTT-CCTTG----TA----------CCA-AACAGTGTCGC---A-CG-A-T--GTAG-G-A-AGCA------------CAAG-GA-C--TGGAG-A-GGTCA-----CATC-CT-GATG--TC-C-TGAAACTTT-GAG--------TGA-T-TAC--AAAGCAC--A---GA------AGTC-CC---AT----GAAGA-AA------------G-ACC--ATCA-CC-TG-TT-GTGT--------C-----------CCTT--G-TCT-T-CAA-AAG-TTGT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242602 121 - 183742232 ----------------------------------------------------------------------AG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------c-----------tctt--a-ttt-t-caa-aat-tctt
i Papio_anubis.CM001495.2                                I 32 C 0
s Papio_cynocephalus.k141_1507553                             9064 121 +     21308 ----------------------------------------------------------------------AG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GTGAA-AA------------G-CTC--GTTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Papio_cynocephalus.k141_1507553                        I 32 C 0
s Papio_hamadryas.Contig39                                  291638 121 -  20919399 ----------------------------------------------------------------------AG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Papio_hamadryas.Contig39                               I 32 C 0
s Papio_kindae.k141_2214839                                  21712 121 -     27687 ----------------------------------------------------------------------AG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAATGC--A---GA------GGGC-TC---AT----GCGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Papio_kindae.k141_2214839                              I 32 C 0
s Papio_papio.k141_799093                                    14858 121 +     16796 ----------------------------------------------------------------------AG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Papio_papio.k141_799093                                I 32 C 0
s Papio_ursinus.k141_2278143                                 21669 121 -     23640 ----------------------------------------------------------------------AG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--A-TTT-T-CAA-AAT-TCTT
i Papio_ursinus.k141_2278143                             I 32 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14490 163 +     78924 TC--CATTG-GTAT-TTT-CCTTG----TG----------CTG-ACAAGCTCAAT---A-CA-G-T--GAAGGG-A-AGCA------------CA-A-GA-C--TGGAA-A-GGTCA-----CATC-TT-CCTG--TC-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25754  95 +     31479 GC--TATTT-GCAC-CAC-CC-TG----AA----------CCA-AAGCATACTGC---A-CA-A-A--ACAG-G-G-GACT------------TGAG-GC-C--TTAAA-T-GGTCA-----TGTC-TT-TGTG--CT-C-TGGAAGCTT-CGG--------TGG----------------------------------------------------------------------------------------------------------------------------------------
i Perodicticus_ibeanus.k141_1921260                      C 0 I 92
s Perodicticus_potto.k141_1854441                            18123  95 -     24908 GC--TATTT-GCAC-CAC-CC-TG----AA----------CCA-AAGCATACTGC---A-CA-A-A--ACAG-G-G-GACT------------TGAG-GC-C--TTAAA-T-GGTCA-----TGTC-TT-TGTG--CT-C-TGGAAGCTT-TGG--------TGG----------------------------------------------------------------------------------------------------------------------------------------
i Perodicticus_potto.k141_1854441                        C 0 I 92
s Perognathus_longimembris.PerPac_flattened_line_89005        1192 163 +      9367 GA--TATTG-ACAT-TTT-TCTTG----TA----------CCA-GCTAACACTGC---A-CA-G-T--AGCA-G-A-GGCA------------CAAG-GA-T--TGAAA-A-GGTCA-----TGTC-TT-TATT--TT-C-TGAAAGCTT-GAA--------TGG-T-TCC--AAAGTGC--T---TA------GGTC-CC---AT----GCATA-AA------------T-ATC--ATCA-CT-TG-GT-ATGT--------C-----------TCTT--C-TTT-T-GAG-TAT-TTTT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246260 162 +  18517816 TC--TATTG-GCGT-GTT-CGTTG----TA----------CCC-G-TAGCAAGGC---A-CA-G-C--CCAG-G-A-AGCG------------CA-G-GG-C--TGAAA-A-Ggtca-----tgtc-tt-ttct--tt-c-tgaaagctT-GAG--------CGC-AATCC--TAAGTGC--A---GA------GGTC-CT---CT----GCAGA-AA------------G-ATC--ATTA-CT-TG-CT-ATGG--------C-----------CCTT--G-TTT-T-GAA-TAT-TCTT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31366 138 -     56120 TC--T--TG-GCAT-CTT-TCTTG----CA----------TCA-CCCAGCACTTT---A-TA-G-TT-AGAG-A-A-GTCA------------CAAG-GA-C--TAAAA-A-GGTCA-----TGTC-TT-TATT--TT-C-GGAGAACCT-GAG--------TGT-T-TAC--AAAGTGC--A---GA------AGCC-TC---AT----GCAGA-GA------------C-CTCTTATTA-CC-TG------------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_17301                 I 12 I 24
s Phocoena_phocoena.PhoPho_flattened_line_46867              12260 100 -     15039 ----------------------------------------------------------------------------------------------------------------GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGA-T-TAC--AAATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--GTTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAG-TAAT
i Phocoena_phocoena.PhoPho_flattened_line_46867          I 53 C 0
s Piliocolobus_badius.k141_2704958                            1844 163 +     55023 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCCA--CT-T-GGAAAGCTT-GTA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----ACAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAG-AAT-TCTT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1394 163 -     89929 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCCA--CT-T-GGAAAGCTT-GTA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----ACAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAG-AAT-TCTT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            1983 163 +     40849 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCCA--CT-T-GGAAAGCTT-GTA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----ACAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAG-AAT-TCTT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253647 163 +  14605196 TC--TGTTG-GCTT-CAT-CCTTA----TG----------TCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCCA--CT-T-GGAAAGCTT-GTA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----ACAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAG-AAT-TCTT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3187 162 +     22231 CC--TATTG-GCAT-TTC-CCTTG----TA----------TCA-GCCCGCATTGC---A-CA-C-C--ACGG-G-A-AGCA------------C-AG-GA-C--TGGAA-A-TATCA-----CATC-TT-TCTG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AATGCTC--A---TA------GGTT-CC--A-T----GCAGA-AA------------G-ATC--ATTA-CT-TG-CT-TAGT--------C-----------CCTT--G-TTT-T-CAA-AAT-TCTT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64278 147 +    207309 TC--CTTTG-GCCT-TAT-CCTTG----CA----------CCT-ACTAGCATTGC---A-CA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT--ATG--TT-C-TGAAAGCTT-GAG--------TGC-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATCA-CC-TG-CT-GTGT--------C-----------TCTT----------------------
i Pithecia_albicans.k141_1239476                         C 0 I 10
s Pithecia_chrysocephala.k141_785207                          5371 148 -     25401 TC--CTTTG-GCCT-TAT-CCTTG----CA----------CCT-ACTAGCATTGC---A-CA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATCA-CC-TG-CT-GTGT--------C-----------TCTT----------------------
i Pithecia_chrysocephala.k141_785207                     C 0 I 10
s Pithecia_hirsuta.k141_640380                               31114 147 +     58159 TC--CTTTG-GCCT-TAT-CCTTG----CA----------TCT-ACTAGCATTGC---A-CA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT--ATG--TT-C-TGAAAGCTT-GAG--------TGC-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATCA-CC-TG-CT-GTGT--------C-----------TCTT----------------------
i Pithecia_hirsuta.k141_640380                           C 0 I 10
s Pithecia_mittermeieri.k141_1280039                         31390 147 +     63561 TC--CTTTG-GCCT-TAT-CCTTG----CA----------TCT-ACTAGCATTGC---A-CA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT--ATG--TT-C-TGAAAGCTT-GAG--------TGC-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATCA-CC-TG-CT-GTGT--------C-----------TCTT----------------------
i Pithecia_mittermeieri.k141_1280039                     C 0 I 10
s Pithecia_pissinattii.k141_878371                           31150 147 +     51148 TC--CTTTG-GCCT-TAT-CCTTG----CA----------TCT-ACTAGCATTGC---A-CA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT--ATG--TT-C-TGAAAGCTT-GAG--------TGC-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATCA-CC-TG-CT-GTGT--------C-----------TCTT----------------------
i Pithecia_pissinattii.k141_878371                       C 0 I 10
s Pithecia_pithecia.tarseq_165                              556120 148 -   4542175 TC--CTTTG-GCCT-TAT-CCTTG----CA----------CCT-ACTAGCATTGC---A-CA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATCA-CC-TG-CT-GTGT--------C-----------TCTT----------------------
i Pithecia_pithecia.tarseq_165                           C 0 I 10
s Pithecia_vanzolinii.k141_1369553                           31134 147 +     51125 TC--CTTTG-GCCT-TAT-CCTTG----CA----------TCT-ACTAGCATTGC---A-CA-G-C--ACAG-A-A-AGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT--ATG--TT-C-TGAAAGCTT-GAG--------TGC-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATCA-CC-TG-CT-GTGT--------C-----------TCTT----------------------
i Pithecia_vanzolinii.k141_1369553                       C 0 I 10
s Platanista_gangetica.PlaMin_flattened_line_167872           4350 100 -      8168 ----------------------------------------------------------------------------------------------------------------GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGA-T-TAC--AAATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGC--------C-----------CCTT--G-TTT-T-CAA-AAG-TCAT
i Platanista_gangetica.PlaMin_flattened_line_167872      I 53 C 0
s Plecturocebus_bernhardi.k141_2549090                        7535 163 +     39866 TC--TGTTG-GCAT-TAT-CCTTG----CA----------CCC-ACTAGCACTGC---A-TA-G-T--GCAG-A-A-CGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AG----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2619 163 -      9282 TC--TGTTG-GCAT-TAT-CCTTG----CA----------CCC-ACTAGCACTGC---A-TA-G-C--GCAG-A-A-CGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGGGTGC--A---GA------GGGC-CC---AG----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42023 163 -     87950 TC--TGTTG-GCAT-TAT-CCTTG----CA----------CCC-ACTAGCACTGC---A-TA-G-C--GCAG-A-A-CGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AG----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42417 163 -     88961 TC--TGTTG-GCAT-TAT-CCTTG----CA----------CCC-ACTAGCACTGC---A-TA-G-C--GCAG-A-A-CGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AG----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7115 163 -     39403 TC--TGTTG-GCAT-TAT-CCTTG----CA----------CCC-ACTAGCACTGC---A-TA-G-C--GCAG-A-A-CGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AG----GCAGA-AA------------G-CTT--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42066 163 +     87928 TC--TGTTG-GCAT-TAT-CCTTG----CA----------CCC-ACTAGCACTGC---A-TA-G-C--GCAG-A-A-CGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGGGTGC--A---GA------GGGC-CC---AG----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7112 163 -     60166 TC--TGTTG-GCAT-TAT-CCTTG----CA----------CCC-ACTAGCACTGC---A-TA-G-C--GCAG-A-A-CGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AG----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14049 163 -     67232 TC--TGTTG-GCAT-TAT-CCTTG----CA----------CCC-ACTAGCACTGC---A-TA-G-C--GCAG-A-A-CGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AG----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          41965 163 -     90634 TC--TGTTG-GCAT-TAT-CCTTG----CA----------CCC-ACTAGCACTGC---A-TA-G-C--GCAG-A-A-CGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AG----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43432 163 +     89403 TC--TGTTG-GCAT-TAT-CCTTG----CA----------CCC-ACTAGCACTGC---A-TA-G-C--GCAG-A-A-CGCG------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AG----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177356 163 - 189387572 TC--TGTTG-GCTT-CAT-CC-TGG---CA----------CTG-ACTAGCACTGC---A-CA-G-C--GTAG-A-A-GGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-AGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAAA-AC------------G-CTC--ATTA-TA-TG-CT-GTGT--------C-----------Tctt--g-ttt-t-caa-aat-tctt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192173 163 -   9816681 TC--TGTTG-GCTT-CAT-CC-TGG---CA----------CTG-ACTAGCACTGC---A-CA-G-C--GTAG-A-A-GGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-AGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAAA-AC------------A-CTC--ATTA-TA-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              26969 163 +     69807 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTGGCACTGC---A-CA-G-C--CCAG-A-A-GGCA------------CAAG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-C-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCGAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44155 163 -     80239 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTGGCACTGC---A-CA-G-C--CCAG-A-A-GGCA------------CAAG-GA-C--CCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-C-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCGAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_845924                    9 157 -       422 TG--GGTT--GCGT-TTT-CCTTG----TG----------CTG-GCCGGCTTTGC---A-CA-C-G--GTGG-G-A-GGCC------------CAG---G-C--TGAAA-A-GGTCA-----CGTC-TT-CTTG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC---AAGTGC--A---GA------GGCC-CC---TT----GCAG--AC------------G-ATC--ATCA--C-TG-CT-CCGT--------C-----------TCTT--G-TTT-G-CAA-AAT-TCTT
i Procavia_capensis.ProCapCap_scaffold_845924            N 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982020 163 +   4620579 TC--TATTG-GCAT-CAT-CCTCG----AA----------CCA-AGCAGAATTGC---A-CT-A-T--ACAG-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GATCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTC--GTTA-CC-TG-CT-ATGT--------c-----------tctt--g-ttt-t-caa-aat-tctt
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565525 163 -   2598838 TC--TATTG-GCAT-CTT-CCTTG----AA----------CCA-AGCAGAATTGC---A-CA-A-T--ACAA-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---TT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATAT--------c-----------tctt--g-ttt-t-caa-aat-tctt
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3163 163 -      7103 TC--TGTTG-GCAT-CTT-CCTTG----AA----------CCA-AGCAGAATTGC---A-CA-A-T--ACAA-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---TT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATAT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3760 163 -     11706 TC--TATTG-GCAT-CTT-CCTTG----AA----------CCA-AGCAGAATTGC---A-CA-A-T--ACAA-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTTG-----TGTC-TT-TATG--AT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---TT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7498 163 -     30655 TC--TATTG-GCAT-CTT-CCTTG----AA----------CCA-AGCAGAATTGC---A-CA-A-T--ACAA-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--AT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---TT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33811 163 +     46564 TC--TATTG-GCAT-CTT-CCTTG----AA----------CCA-AGCAGAATTGC---A-CA-A-T--ACAG-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---TT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94090 163 -     98465 TC--TATTG-GCAT-CTT-CCTTG----AA----------CCA-AGCAGAATTGC---A-CA-A-T--ACAA-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---TT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATAT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7729 163 +     35169 TC--TATTG-GCAT-CTT-CCTTG----AA----------CCA-AGCAGAATTGC---A-CA-A-T--ACAA-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---TT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GTAT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            36867 163 +     52041 TC--TGTTG-GCAT-TTC-CATTG----TA----------CCC-A-CAGCAAGAC---C-CA-A-C--ACAG-AAA-GGCA------------CA-G-GGCC--TGAAA-A-Ggtca-----tgtc-tt-tatt--tt-c-tgaaaGCCT-GAG--------TGC-T-TCC--CAAGTGC--A---GA------GTTC-CT---CA----GCAGA-AA------------G-ATC--ATTA-CC-TG-CA-ACTT--------C-----------cctt--g-ttt-t-aaa-tat-tctt
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51583 169 -     66298 TC--TATTG-GCAT-TTT-CCTTG----TG----------CCA-ACCAGCATTACAGCA-CA-A-C--GCAG-G-G-AGCA------------CAAA-GG-C--TGAAA-A-GGTCA-----CATC-GT-CATG--TC-T-TGAAAGCTT-GAG--------TGG-T-TAC--CAAGTCC--A---CA------GGCC-TCATGAT----GCGCA-AA------------G-ATC--CTTA-CT-TG-CT-CTGT--------T-----------CCTT--G-TTT-T-CAA-AAT-CCTT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4078 167 -     18639 TC--TATAG-GTGT-TTT-CCTTT----CA----------CCA-ACCAGCACTGA---A-CA-A-T--GGAG-G-A-AGCA------------GAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TTC--AAAGTGC--A---GA------GGTC-CC---GTGCGTGCAGA-AA------------G-ATC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840274 161 -  28871421 TC--TATTG-GCAT-TTT-CCTTA----TA----------C-A-ACCAGCATTGC---A-CA-A-T--ATAG-G-A-GTCA------------CAAG-GA-C--TGAAA-A-GATCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-CAC--AAAGTGC--A---GC------AGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CCA-AA--ACTT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536785 161 -   4952924 TC--TATTG-GCAT-TTT-CCTTA----TA----------C-A-ACCAGCATTGC---A-CA-A-T--ATAG-G-A-GTCA------------CAAG-GA-C--TGAAA-A-GATCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---GC------AGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CCA-AA--ACTT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098536 163 +  38429054 TC--TCTTG-GCGT-TTT-TCTTG----TA----------CCG-ACAAGCACCGG---A-CA-G-T--GGAGGG-A-AGCA------------TA-G-GA-C--TGGAA-A-GGTCA-----CATC-TT-CATG--TC-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGTC-CC---AT----GTGGA-AA------------G-ATC--GTTA-CC-TG-CT-GTGT--------c-----------tctt--g-ttt-t-caa-aat-tctt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26343 163 +     91421 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152835 163 -   7812017 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTG-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7210 163 +     72585 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52606 163 +     55069 TC--TATTG-TCAT-TTT-TCTTG----TA----------CCA-ACCAGTGTTCC---A-CA-A-T--GTAG-G-A-AGCA------------CAAG-GA-C--CGAAG-A-GGTCA-----CATT-CT-GATG--TC-C-TGAAACCTT-GAG--------TGA-T-TAC--AAAGTAC--A---GA------AGTT-CC---AT----GAAGA-AA------------G-ATC--ATTA-CC-TG-CT-TTGT--------C-----------CGTT--G-TCT-T-CAA-AAG-TCAT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022175  87 -  90668790 TC--TATTG-GCAT-TTC-CATTG----GA----------CCC-A-CAGCAAGGC---A-CAAA-C--ACAG-G-C-GGCG------------TA-G-GG-C--TGAAA-A-GGTCA-----CGTC-TT-TATT--TT-C-TGAAAGC---------------------------------------------------------------------------------------------------------------------------------------------------------
i Rattus_norvegicus.chr16                                C 0 I 62
s Rhinolophus_sinicus.LVEH01000134.1                       2914215 110 +   3329780 ---------------------------------------------------------------------------------------------CAAG-GC-C--TGAAA-A-GGTTA-----TATC-TC-TATG--TT-A-CCAAAGCTT-GAG--------TGG-T-AAC--AAAGAA---A---GA------GGT---C---AT----ACAGA-AA------------G-ATC--GTTA-CC-TG-CT-ATAT--------C-----------cctt--g-ttt-t-caa-aat-tctt
i Rhinolophus_sinicus.LVEH01000134.1                     I 36 C 0
s Rhinopithecus_bieti.k119_778604                              920 163 +      7119 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTG-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121528 163 + 195417433 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GG-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTG-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235770 163 -   7961872 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTG-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74203 162 -    116970 TC--TATTG-GCAT-TTT-CCTTA----TC----------C-A-ACCAGCATTGC---A-CA-A-T--ATAG-G-A-GTCA------------CAAG-GA-C--TGAAA-A-GAGCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---GC------AGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ACGT--------C-----------CCTT--G-TTT-T-CAA-AAT-TCTT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3420 163 +     27962 TC--TGTTG-GCAT-CAT-CCTTG----CA----------CCT-GCTAACTTTGT---A-TT-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CC-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3315 163 +      6077 TC--TGTTG-GCAT-CAT-CCTTG----CA----------CCT-GCTAACTTTGT---A-TT-G-C--GCAG-A-A-GGCA------------CAAG-GA-C--TGGAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CC-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3405 163 +      5971 TC--TGTTG-ACGT-CAT-CCTCG----CA----------CCT-GCTAACTTTGT---A-TT-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CC-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3326 163 +      5932 TC--TGTTG-GCAT-CAT-CCTCG----CA----------CCT-GCTAACTTTGT---A-TT-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CC-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1668 163 -      4390 TC--TGTTG-GCAT-CAT-CCTCG----CA----------CCT-GCTAACTTTGT---A-TT-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TGAAA-A-GGCCA-----CGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CC-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391105 163 - 209938924 TC--TGTTG-GCAT-CAT-CCTTG----CA----------CCT-GCTAACTTTGT---A-TT-G-C--ACGG-A-A-GCCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC-CC---AT----GCAGA-AA------------G-CTC--GTTA-CC-TG-CC-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3275 163 +      5979 TC--TGTTG-GCAT-CAT-CCTCG----CA----------CCT-GCTAACTTTGT---A-TT-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CC-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1466288                               4039 158 -      4301 TC--TGTTG-GCAT-CAT-CCTTG----CA----------CCT-GCTAACTTTGT---A-TT-G-C--GCAG-A-A-GGCA------------CAAG-GA-C--TGGAA-A-GGTCA-----TGTC-TT-TGTG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AGAGTGC--A---GA------GGCC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CC-Gtgt--------c-----------tctt--g-ttt-t-caa-aa------
i Saguinus_oedipus.k141_1466288                          C 0 N 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7277 163 +     16473 TC--TATTG-GCAT-TTT-CCTTG----TA----------CCA-ACCAGTGTTGC---A-CA-A-T--GTAG-G-A-AGCA------------CAAG-GA-C--TGGAG-A-GGTCA-----CAGT-CT-GATG--TC-C-TGAAACTTT-GAG--------TGA-T-TAC--AAAGTAC--A---GA------AGTC-TT---AT----GAAGA-AA------------G-ATC--ATTA-CC-TG-CT-GTGT--------C-----------CCTT--G-TCT-T-CAA-AAG-TTGT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108442 163 + 121099817 TC--TGGAG-GCAT-TAT-CCTTG----AA----------CCT-ACTAGCATTGT---A-CA-G-C--ACAG-A-A-AGCA------------CACG-GG-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTC-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GCGT--------C-----------Tctt--g-ttt-t-caa-aat-tctt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30009 163 -     47369 TC--TGGAG-GCAT-TAT-CCTTG----AA----------CCT-ACTAGCATTGT---A-CA-G-C--ACAG-A-A-AGCA------------CACG-GG-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTC-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GCGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30395 163 -     79414 TC--TGGAG-GCAT-TAT-CCTTG----AA----------CCT-ACTAGCTTTGT---A-CA-G-C--ACAG-A-A-AGCA------------CACG-GG-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTC-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GCGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27086 163 -     34454 TC--TGGAG-GCAT-TAT-CCTTG----AA----------CCT-ACTAGCTTTGT---A-CA-G-C--ACAG-A-A-AGCA------------CACG-GG-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTC-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GCGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14489 163 -     22428 TC--TGGAG-GCAT-TAT-CCTTG----AA----------CCT-ACTAGCATTGT---A-CA-G-C--ACAG-A-A-AGCA------------CACG-GG-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTC-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GCGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29641 163 -     47109 TC--TGGAG-GCAT-TAT-CCTTG----AA----------CCT-ACTAGCATTGT---A-CA-G-C--ACAG-A-A-AGCA------------CACG-GG-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCTC-GAG--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-GCGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237698 163 +   5703754 TC--CGTTG-GCAT-TAC-CCTTG----CA----------GCT-GCTAGCATGGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GG-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCCT-GAG--------TGC-T-TAC--AGAGTGC--A---GA------GGGC-CC---GT----GCAGA-AA------------G-CTC--CTTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TCT-T-CAA-AAT-TCTT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7288 163 +     21866 TC--CGTTG-GCAT-TAC-CCTTG----CA----------GCT-GCTAGCATGGT---A-TA-G-C--ACAG-A-A-AGCG------------CAAG-GG-C--TGAAA-A-GGTCA-----TGTC-TT-TATG--CT-C-TGAAAGCCT-GAG--------TGC-T-TAC--AGAGTGC--A---GA------GGGC-CC---GT----GCAGA-AA------------G-CTC--CTTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TCT-T-CAA-AAT-TCTT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115382 126 +    313613 ---------------------------------------------------------------A-T--ATAG-G-A-GGCA------------CAAG-GG-C--TGTAA-A-GGTGA-----CATC-TT-TGTG--GT-CTTGAAAGCTT-GAG--------CTG-T-TAC--AAAGTGC--A---GA------GGTCCC----AA----GCAGA-TA------------G-ATC--ATT--CT-TG-CT-TTCT--------C-----------CTTT--G-TTTNC-CAA-AAT-TCTT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 36 C 0
s Semnopithecus_entellus.k141_158471                         24662 163 +     27374 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-G-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28176 163 +     58920 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14672 163 -     45317 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-G-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22331 163 -     42441 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-G-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25009 163 -     29113 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-G-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28083 163 -     48123 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACTGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-G-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48643 161 +     77746 TC--TATTG-ACCT-GTT-CATTG----TA----------CCC-A-CAGCAAGGC---A-CA-T-C--ACAG-G-A-GGCA------------CA-G-GG-C--TGAAA-A-TGTCA-----TGTC-TT-TATT--TT-C-TGAAGGCTT-GAG--------TGC-T-TCC--TAAGTGC--A---GA------GGTC-CT---CT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-GAA-TAT-CCTT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857725 129 -   1910179 --------------------------------------------------GTTGT---A-CA-C-T--AAAG-G-A-GGCA------------CAAG--A-C--TGAAA-A-GGTCA-----CCTC-TT-TA----TT-A-TGAAAGCTT-GAG--------TGA-T-TAC--AAAGTGT--A---GA------GGTT-C----AG----GGAGA-AA------------G-ATT--ATAA-CC-TG-CT-GTGT--------C-----------CCTT--G-TTT-T-CAG-AAT-TCTT
i Solenodon_paradoxus.SolPar_flattened_line_126          I 17 C 0
s Sorex_araneus.JH798187.1                                 4670779 162 +  18376816 TC--TATTA-GCAT-TTT-CCTTG----TA----------TCA-GGTAGCATTGT---A-AA-A-T--ACAG-A-A-GGTG------------CAAG-GA-C--CA-AA-A-AGTGA-----TATA-TT-TATG--TT-C-TGAAAGCTT-GAA--------CAG-T-TAT--AAAGAGT--A---AA------GGAC-C----AA---TGCAGC-AA------------T-GTT--ATTG-CC-AG-TT-ATGT--------C-----------ACTT--G-CTT-T-GAA-GAT-TATT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867802 163 +   3870691 Tc--tattt-gcat-ttc-ccttg----tA----------CCA-ACCAGCACGGC---A-CA-A-C--GTAG-G-A-GGCA------------CAAG-GA-C--TGTAA-A-Ggtca-----tgtc-tt-tatt--tt-c-tgaaagctT-GAG--------TGG-T-TGC--GGAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------C-ATC--ATTA-GC-GG-CT-ATGC--------C-----------TCTT--G-TTT-T-CAA-CAT-CCTT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6151 163 -     97271 TC--TATAG-GTGT-TTT-CCTTT----TA----------CCA-ACCAACACTGC---A-CA-A-T--GGAG-G-A-AGTA------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TTC--AAAGTGC--A---GA------GGTT-CC---AT----GCAAA-AA------------G-ATC--ATTA-AC-TG-CT-GTGT--------C-----------TCAT--G-TTT-T-CAA-AAT-TCTT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 82 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124311 164 +    196729 TT--TATTG-ACGT-TTT-GCTTG----TA----------CCG-ACAAGCACCGT---A-CA-G-T--GGACGG-AAAGCA------------CA-G-GA-C--TGGAA-A-GGTCA-----CATC-TT-CCTG--TC-C-TGAAAGCTT-GAG--------TGG-T-CAC--AGAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTC-CC-TG-CT-GTGC--------C-----------TCTT--G-TTT-G-CAA-AAT-TCTT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643202 164 +  69701581 TC--TATTG-GCAT-TTT-CCTTG----TA----------CTA-ACTAGCATTGC---A-CA-A-T--ATAG-G-A-AGTG------------CAAG-AA-T--TGAAA-G-GGTCA-----CATC-CT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--T---GA------GGTC-TT---AC----GCAGA-AA------------G-ATC--ATTA-CC-TA-CTAATGT--------C-----------CCTT--G-TTT-T-CCA-AAG-TCTT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390600 164 +   1523678 TC--TCTTG-GCTT-CAT-CCTTGG---CA----------CCC-ACTAGCACTGC---A-CA-G-C--GTAG-A-A-GGCC------------CAGG-GA-C--TGGAA-A-GGTCA-----TGTC-TT-TCTG--CT-C-GGAAAGCTT-GAA--------TGG-T-TAC--AGAGTGC--A---GA------GGGC-CC---AT----GCAAA-AA------------G-CTC--ATTA-TC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13542 120 +     22964 CC--TGTTG-GCAT-TTT--CTTG----TA----------TCA-ACCAGTATTGC---A-CA-G-T--ATAG-G-A-AGCA------------CAAG-AA-C--TGCAG-A-GCTCA-----CATA-TT-TATG--TT-C-CGAAAACTT-GAG--------TGG-T-TAC--CAAGTGC--A---TT------GGTC-CCATGCT-----------------------------------------------------------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 23
s Tamandua_tetradactyla.TamTet_scaffold_224794                2127 163 +      5583 GC--TATTG-GCAT-TTC-CCTTG----CA----------CCA-ACCAGAATTGC---C-TA-A-T--GTAG-G-A-GACA------------CAGG-GT-C--TGAAA-A-GGTCA-----CGTC-TT-TATG--TT-C-TGGAAGCTT-GAG--------CAG-T-TAC--AGAGTGC--A---GA------AATC-TC---AT----GCAGG-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------T-----------CCTT--G-TTT-T-CAA-AAT-TCTT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191047 160 +    199430 TC--GATTG-GCAT-TTC-CATTG----GA----------CCA-ACCAGCACTGC---A-CA-A-T--ATAG-G-A-AGCA------------GGAG-GA-C--TG-AAAA-GGTCA--------C-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---AA------GGTC-CC---AT----GAAGG-AA------------G-ATC--ATTA-CC-TG-TT-GTAT--------C-----------CCTT--G-TTT-T-CAA-AAT-TCTT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105017 160 -    539355 TC--GATTG-GCAT-TTC-CCTTG----GA----------CCA-ACCAGCACTGC---A-CA-A-T--ATAG-G-A-AGCA------------GGAG-GA-C--TG-AAAA-GGTCA--------C-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--AAAGTGC--A---AA------GGTC-CC---AT----GAAGA-AA------------G-ATC--ATTA-CC-TG-TT-GTGT--------C-----------CCTT--G-TTT-T-CAA-AAT-TCTT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1780720                                6361  89 +      6850 --------------------------------------------------------------------------------------------------------------------------------T-TATT--CT-C-TGAAAGCTG-TAG--------TGG-T-TAC--AGAACGC--A---CA------GGTC-CC---GA----GCAGA-AA------------G-TTC--ATTA-CT-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CGA-C-t-tctt
i Tarsius_lariang.k141_1780720                           I 68 N 0
s Tarsius_wallacei.k141_226975                                6436  89 +     20590 --------------------------------------------------------------------------------------------------------------------------------T-TATT--CT-C-TGAAAGCTG-TAG--------TGG-T-TAC--AGAACGC--A---CA------GGTC-CC---GA----GCAGA-AA------------G-TTC--ATTA-CT-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CGA-C-t-tctt
i Tarsius_wallacei.k141_226975                           I 68 I 306
s Theropithecus_gelada.CM009954.1                           352588 121 - 186847797 ----------------------------------------------------------------------AG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------CGG-T-TAC--AGAGTGC--A---GA------GGGC-TC---AT----GCGAA-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------c-----------tctt--a-ttt-t-caa-aat-tctt
i Theropithecus_gelada.CM009954.1                        I 32 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19222 152 -     31044 CC--TCTTG-GCAT-TCT-CCTCG----TG----------CCA-GTCGGCACTGC---C-TC-C-T--ACAG-G-G-GACA------------TGAG-AC-C--TGAAA-A-GGTCA-----CATC-TT-CATG--CT-C-TCAAAGCTC-GAG--------TGG-G-TACGAA--GTGC--A---GA------GGTC-TC---GT----GCAGG-GA------------G-ATG--GTTA-CC-TG-CT-CTGT--------T-----------TCTT--G-TTT---------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 11
s Tonatia_saurophila.TonSau_scaffold_294                    479575 148 -    610378 TC--TCTCG-GCAT-TTT-CCCTG----TA----------CCA-GTCAGCATCAGAGTG-CA-G-C--ACAG-G-T-AGCA------------GGAG-GA-C--TGAA--A-GGTCA-----CACC-TT-TGTG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--GAAGTGC--A---CG------GGCC-TCGTGAT----GCGTA-AA------------G-ATC--ATTA-AT-TG-CC-ATGT----------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 19
s Trachypithecus_auratus.k141_1189070                        20208 163 +     26378 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     32886 163 -     78344 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19533 163 +     25722 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      27838 163 -     62838 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           27884 163 +     46913 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8691 163 -     28527 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29775 163 -     64340 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27812 163 -     63452 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9257 163 +     22490 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCGGCACTGC---A-CA-G-C--ACAG-A-A-GGTA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2683 163 -      6147 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9588 163 -     13050 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254828 163 -   6242583 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                         852 163 +     19340 TC--TGTTG-GCTT-CAT-CCTTA----CG----------TCT-ACCGGCACTGC---A-CA-G-C--ACAG-A-A-GGCA------------CAAG-GA-C--TCAAA-A-GGTCA-----TGTC-TT-TCTG--CT-T-GGAAAGCTT-GAA--------TGG-T-TAT--AGAGTGC--A---GA------GGGC-TC---AT----GCAAG-AA------------G-CTC--ATTA-CC-TG-CT-GTGT--------C-----------TCTG--G-TTT-T-CAG-AAT-TCTT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   172890 163 -    200418 TC--TATTG-GCAT-TTT-GTTTG----TA----------GGA-ACAAGCACTGC---A-CA-G-T--GTAG-G-A-AGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----CATT-CT-TATG--TC-C-TGAAAGCTT-GAG--------CAA-T-TAC--AAAGTGC--A---GA------AGTC-CC---AT----GTAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TCT-T-CAA-AAG-TCGT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6479854 163 -  10818551 TC--TGTT-GGCAT-TTT-CCTTG----TA----------CTG-ACCAGCTTTGC---A-CA-A-T--ACAG-G-A-GACA------------CAAGGGA-C--TGAAA-A-GGTCA-----CGTC-TA-TATG--TT-T-TGAAAGCTT-GAG--------TGG-T-TAC--CAAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-T-TT--------C-----------TCTT--G-TTT-G-CAA-AAT-TCTT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833562 162 -   4065304 TC--TCTTG-GCAG-GTC-TCCTG----TA----------CTA-G-CAGCATTGC---A-CA-A-G--AGAA-G-A-GGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TGTG--TT-C-TGAAAGCTT-GAA--------TGG-T-TAC--AAGGAGC--A---GT------GGTC-CC---AT----GTGGA-AA------------G-ATC--ATTA-GC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7582 162 -     70247 TC--TCTTG-GCAG-GTC-CCTTG----TA----------CCA-G-CAGCATTGC---A-CA-A-T--AGAA-G-A-GGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----CGTC-TT-TGTG--TT-C-TGAAAGCTT-GAA--------TGG-T-TAC--AAGGAGC--A---GT------GGTC-CC---AT----GTGGA-AA------------G-ATC--ATTA-GC-TG-CT-ATGT--------T-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361161 100 -  33153633 ----------------------------------------------------------------------------------------------------------------GGTCA-----CATC-TT-TATA--TT-C-TGAAAGCTT-GAG--------TGA-T-TAC--AAATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAG-TAAT
i Tursiops_truncatus.MRVK01000835.1                      I 53 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3085 164 -     21056 TC--TATTG-GTTTTTTT-CCTTC----TA----------CCA-ACTAACAAGAC---A-AC-A-T--ATAG-G-A-CGCA------------CAAG-GA-C--CTTGA-A-GGTCA-----CATC-TT-TGTG--TT-C-TAAAAGCTT-GAG--------TTG-A-TAC--AAAATGC--A---GA------GGTTCC----AA----GCAGA-AA------------G-ATC--ATTA-GC-TG-CT-TTGT--------C-----------CTTT--G-TTT-C-CAA-AAC-TCCT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181252 162 +   5085361 TC--TGTAG-TTGT-TTT-CCTTT----TA----------CCA-ACCAGCACTGC---A-CA-A-T--GGAG-A-A-ATCA------------CAAG-GA-C--TGGAA-A-CATCA-----CATT--T-TGTG--TC-C-TGAAAGCTT-GAG--------TGG-T-TTC--AAAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-TTGT--------c-----------tctt--g-ttt-t-caa-aat-tctt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24662 163 -     30710 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCG-AGCAGAATTGC---A-CA-A-T--ACAG-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23569 163 -    147434 TC--TATTG-GCAT-CAT-CCTTG----AA----------CCG-AGCAGAATTGC---A-CA-A-T--ACAG-G-A-GGTT------------CAAG-GA-C--TGAAA-A-GGTCG-----TGTC-TT-TATG--CT-C-TGAAAGCTT-GAG--------TGG-T-TAT--ACAGTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-CTC--ATTA-CC-TG-CT-ATGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75733 163 +   5488506 TC--TGTCT-GCGT-TTT-TCTTG----TA----------CCA-ACCAGTATTGC---A-CA-A-T--ATAG-G-A-GGCA------------CAAG-GA-C--TGAAA-A-GGTCA-----CATC-CT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TAC--CAAGTGC--A---AA------GGTC-CC---AC----ACAGA-TA------------G-AGC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAG-TCCT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104391 160 -    112863 TC--TATAG-GTGT-TTT-CCTTG----TA----------CCA-ACCAGCAGTGA---A-CA-A-T--GGAG-G-A-AGCA------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-AATA--TT-T-TGAAAGCTT-GAG--------TGG-T-TAC--AAAATGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATA--ATTA-CC-TG-CT-ATGT--------C--------------T--A-TTT-T-CAA-AAT-TCTT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173592 163 -    224448 TC--TATTG-GCAT-TTT-CCTTG----TA----------CCA-GCCAACACAGC---A-TA-A-T--GTAG-G-A-GGCA------------CAAG-GA-C--TGTAA-A-GGTCA-----TGTC-TT-TATT--TT-C-TGAAAGCTT-GAG--------TGC-T-TAC--AAAATGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CT-GG-CT-ATGC--------C-----------TCTT--G-TTT-T-CAA-CAT-TCTT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28284 163 -     86975 TC--TATAG-GTGT-TCT-CCTTT----TA----------CCA-ACCAGCACTGC---A-CA-A-T--GGAG-G-A-ATCA------------CAAG-GA-C--TGGAA-A-GGTCA-----CATC-TT-TATG--TT-C-TGAAAGCTT-GAG--------TGG-T-TTC--AAAGTGC--G---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-GTGT--------C-----------TCTT--G-TTT-T-CAA-AAT-TCTT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                        81 137 -       833 --------------------------------------------A-CAGTGCCAC---A-CA-T-G--ACAG-G-A-GGTA------------CAAG-GA-C--TGAA--A-GGTCA-----TGTC-TT-TATT--TT-C-AGAAAGCTT-GAG--------TGG-T-TCC--AAAGTGC--A---GG------CAGT-CT---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------TCCT--G-TTT-C-CAA-TAT-TCTT
i Zapus_hudsonius.ZapHud_scaffold_501999                 I 21 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             569 100 +      1812 ----------------------------------------------------------------------------------------------------------------GGTCA-----CATC-TT-TGTG--TT-C-TGAAAGCTT-GAG--------TGA-T-TAC--AAATTGC--A---GA------GGTC-CC---AT----GCAGA-AA------------G-ATC--ATTA-CC-TG-CT-ATGT--------C-----------CCTT--G-TTT-T-CAA-AAG-TAAT
i Ziphius_cavirostris.ZipCav_flattened_line_572595       I 53 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5052 103 +     36723 T-ATCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-ACA--------GCAGCCA-A----------------------CATTAATGAG-T
s Acinonyx_jubatus.LLWD01001279.1                           812442 107 +   1699592 a-atCAGGTTATC-----------AG-CTGT-Aagaa----tgc--ttttt-ttc--ctttggttcc-cAAA-CAGTGGG---G-CA----CT-TAA-AACA---G--------CAGGTCAC-CG----GAGAACAGCA--------TCAGCCA-A----------------------CATTGATAAG-T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24696 104 +     63021 A-ATCAAGTTACT-----------GG-CAAT-AAGAG----TTC--TGT---TCT--CTTTGGTTAC-CAAA-CAATAAA---G-CA----CT-TA--AGGA---G--------CAGGTCAT-CT----GAGTACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20414900 105 +  29979442 a-atcAGGATATC-----------GG-CAAT-aagat----tgt--ttt---ttc--ctttggtttc-caaA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGTTCAC-CT----GAGAACAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215212 105 +    347723 a-atcAGGTTATC-----------GG-CAAT-AAGAa----tgc--ttt---ttc--ctttgcttcc-caAA-CAATGAG---G-CA----TT-TAT-AATA---G--------CAGGTCAC-CT----GAGAACAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17661 105 -     61208 A-ATCAGGTTACA-----------GG-CAAT-AAGAG----TGC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAA---G-CA----CT-TAT-AACA---G--------CAGGTCAC-CC----GAGAACACCA--------CCAGCCA-A----------------------CATTAATAAA-T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47368 108 +     53615 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAA-T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43329 125 +     44087 A-ACCAGGTTACT-----------GG-CAAT-GC-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAGTGAG---G-CA----TT-TCT-GCCA---G--------CGAGTCAC--T----GAGAACTGCA--------GCAGCCC-GTTAATTAATGAATTAACTTATTCATTAATAAG-T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         15954 108 -     21945 A-ACCAGGTTACT-----------GG-CAAT-GC-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAGTGAG---G-CA----TT-TCT-GCCA---G--------CGAGTCAC-CC----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-C
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17637 108 +     32033 A-ACCAGGTTACT-----------GG-CAAT-AC-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CACTGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CC----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-C
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71804 105 -     84148 A-ATCAGATTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAGGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44043 105 -     78289 A-ATCAGATTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAGGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43482 105 +     55831 A-ATCAGATTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAGGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                41932 105 -     64179 A-ATCAGATTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTGTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAGGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23566 105 -     24835 A-ATCAGATTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAGGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40557 105 +     45454 A-ATCAGATTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAGGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46206 105 +     70886 A-ATCAGATTACT-----------GG-AAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAGGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8379 105 +     30854 A-ATCAGATTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAGGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32513 105 +     42133 A-ATCAGATTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAGGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584887 105 +   2318259 A-ATCAGATTATC-----------AG-CTGT-AAGAA----TAT--TTT---CCC--CTTTGGTTAC-CAAA-CAATGAA---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176704  61 -    412891 A-ATCAGGTTGTC-----------AG-CAAT-AAGAA----TGC--TTT---TTC--CTTTGGTTAC-CAAA-CAATGAG---G-TG----CT-TA--A-------------------------------------------------------------------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   I 19 I 36
s Antilocapra_americana.AntAmePen_scaffold_21030             50002 104 -     68529 A-ATCAGATTATC-----------AG-CTGT-AAGAA----TAT--TTT---CCT--TTTTGGTTAC-CAAA-CAATG-A---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     755 105 +     17741 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--TGT---TCC--TTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GACAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1380 105 -     15923 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--TGT---TCC--TTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GACAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671662 105 +   5030052 a-atcaGGTTACT-----------GG-CAGT-AAGAA----TGC--TGT---TCC--TTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GACAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               1655 105 -     16391 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--TGT---TCC--TTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GACAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1215 105 -     17186 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--TGT---TCC--TTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GACAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15579 102 -     32367 A-ATCAAGTTCCA-----------AG-AAAT-AAGAG----TGC--TGT---TCT--CTTTAGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAT-CT----GAAAACAGCA--------CCAGTCA-A----------------------CATTAATA----
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 13 C 0
s Arctocebus_calabarensis.k141_1364444                       19125  89 -     45910 A-ATCATGTTTCT-----------GG-CAAT-GAGAT----AGC--TGT---TCC--CTTTGGTTCC-CAAA-CAATGAG---G-GA----TT-TGT-AACA---G--------CAGGTCCC-CT----GAGAACAGTG--------CCA----------------------------------------
i Arctocebus_calabarensis.k141_1364444                   I 63 I 9
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  4976  61 -     15198 A-ATCAGGTTATC-----------AG-CAAT-AAGAA----TGC--TCT---CCC--CTCTGGTTAC-CAAA-CAGTGAG---G-TG----CT-TA--A-------------------------------------------------------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 19 I 36
s Ateles_geoffroyi_b.tarseq_1536                               274263 105 +  21539123 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TTC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10430 105 +     48076 A-ATCAGGTTACT-----------GG-CAAT-GAGAA----TGC--TGT---TTC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5567 105 -     28759 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TTC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33120 105 +     44353 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TTC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48490 105 -     71267 A-ATCAGGTTACT-----------GG-CAAT-GAGAA----TGC--TGT---TTC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22549 105 -     33135 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TTC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5791 105 +     11645 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCT--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5799 105 -     19611 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCT--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956789 105 -  23207421 A-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAGTGAG---G-CT----GT-TAT-AACA---G--------CAGGTCAG-CC----GAGAACAGCA--------TAAGCCA-A----------------------CATTAATAAG-T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         3998 105 -      4711 A-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAGTGAG---G-CT----GT-TAT-AACA---G--------CAGGTCAG-CC----GAGAACAGCA--------TAAGCCA-A----------------------CATTAATAAG-T
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     85896 105 +    124022 A-ATCAGATTATC-----------AG-CTGT-AAGAA----TAT--TTT---CCC--CTTCGGTTAC-CAAA-CAATGAA---G-CT----TT-TAT-AACA---G--------CAGATCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-G
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21428 105 +    288883 A-ATCAGATTATC-----------AG-CTGT-AAGAA----TAT--TTT---CCC--CTTTGGTTAC-CAAA-TAATGAC---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355814 105 +  48749331 A-ATCAGATTATC-----------AG-CTGT-AAGAA----TAT--TTT---CCC--CTTTGGTTAC-CAAA-TAATGAC---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754382 105 +   1948126 A-ATCAGATTATC-----------AG-CTGT-AAGAA----TAT--TTT---CCC--CTTTGGTTAC-CAAA-TAATGAC---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544521 105 -  45695690 A-ATCAGATTATC-----------AG-CTGT-AAGAA----TAT--TTT---CCC--CTTTGGTTAC-CAAA-TAATGAC---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529546 105 -   4408762 A-ATCAGATTGTC-----------AG-CTGT-AAGAA----TAT--TTT---CCC--CTTTGGTTAC-CAAA-TAATGAC---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7436 105 +     28062 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAG-CT----GAGAACAGCA--------CCTGCCA-A----------------------CATTAAGAAG-T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42730 105 -     91139 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAG-CT----GAGAACAGCA--------CCTGCCA-A----------------------CATTAAGAAG-T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20256 105 +     95584 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAG-CT----GAGAACAGCA--------CCTGCCA-A----------------------CATTAAGAAG-T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20169 105 +    119600 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAG-CT----GAGAACAGCA--------CCTGCCA-A----------------------CATTAAGAAG-T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9736 105 +     18648 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAACTCGC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9275 103 -     13885 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-AT----GAGAACAGCT--------CCAGCCA-A----------------------CATTAATAA---
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1341 105 -      8861 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAACTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453734 105 + 189096842 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACTA---G--------CAACTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1256 105 +      8664 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAACTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630562 104 +  17673402 A-ATCAGGTTATC-----------AG-CTAT-aagaa----tgt--ttt---tcc--ttttggttac-CA-A-CAATGAG---G-CA----TT-TTT-AACA---G--------CAGGTCAG-CT----GAGAACAGCA--------GTAGCCA-A----------------------CATTAATAAG-T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664848 104 +   7040546 A-ATCAAGTTATC-----------AG-CTAT-aagaa----tgt--ttt---tcc--ttttggttac-CA-A-CAATGAG---G-CA----TT-TTT-AACA---G--------CAGGTCAG-CC----GAGAACAGCA--------GTAGCCA-A----------------------CATTAATAAG-T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208508 104 +   1652518 A-ATCAGGTTATC-----------AG-CTAT-aagaa----tgt--ttt---tcc--ttttggttac-CA-A-CAATGAG---G-CA----TT-TTT-AACA---G--------CAGGTCAG-CT----GAGAACAGCA--------GTAGCCA-A----------------------CATTAATAAG-T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42504920 106 +  60362399 A-ATCAGGTTATC-----------AG-CAAT-AAGAC----TGC-TTTT---TTC--CTTTAGTCCC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CT----GAGTACAGCA--------TTAGCCA-A----------------------CATTAATAAG-T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8556 106 -     23171 A-ATCAGGTTATC-----------AG-CAAT-AAGAC----TGC-TTTT---TTC--CTTTAGTCCC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CT----GAGTACAGCA--------TTAGCCA-A----------------------CATTAATAAG-T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          221899 106 +   9314153 a-atcAGGTTATC-----------AG-CAAT-AAGAC----TGC-TTTT---TTC--CTTTAGTCCC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CT----GAGTACAGCA--------TTAGCCA-A----------------------CATTAATAAG-T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615034 106 +  59632846 a-atcAGGTTATC-----------AG-CAAT-AAGAC----TGC-TTTT---TTC--CTTTAGTCCC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CT----GAGTACAGCA--------TTAGCCA-A----------------------CATTAATAAG-T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106615 106 -  63665305 a-atCAGGTTATC-----------AG-CAAT-AAGAC----TGC-TTTT---TTC--CTTTAGTCCC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CT----GAGTACAGCA--------TTAGCCA-A----------------------CATTAATAAG-T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408617 105 -  46296322 A-ATCAGATTATC-----------AG-CTGT-AAGGA----TAT--TTT---CCC--CTTTGGTTAC-CAAA-CAATGAA---G-CT----TT-TAT-AATA---G--------CAGATCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CGTTAATAAG-T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590890 105 +  44709034 A-ATCAGATTATC-----------AG-CTGT-AAGGA----TAT--TTT---CCC--CTTTGGTTAC-CAAA-CAATGAA---G-CT----TT-TAT-AATA---G--------CAGATCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CGTTAATAAG-T
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1113 105 -      1880 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--TGT---TCC--CATTGGTTTC-CAGG-AGATGAG---A-CA----TT-TAT-AGCA---T--------CAGGCCAC-TT----GAGAACAACA--------CCAGCCA-A----------------------CATTAATAAG-G
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269821 105 +    496798 A-ATCAGGTTACT-----------GG-CAAC-AAGAG----CAC--TGC---TCG--CTTTGATTGC-CAAA-CAATGAG---G-CA----TT-TAC-AATA---G--------CAGGTCAA-CT----GAGAACTGCA--------CTGGCCA-A----------------------CATTAATACA-T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_1091333               174  61 +       553 A-ATCAGGTTATC-----------AG-CAAT-AAGAA----TGC--ATT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CG----CT-TA--A-------------------------------------------------------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_1091333         N 0 I 36
s Castor_canadensis.CasCan_scaffold_39952                    27239 105 -     39886 A-ATCAGGTTACT-----------GG-CAGT-AAGAG----TGC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAA-AACA---G--------CAGGTCAC-CC----GAGAACAGCA--------CCAGCCA-G----------------------CATTAATAAG-G
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79099 109 -    217609 A-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGT--TTT---CCC--CTTTGGTTAC-CAAA-CAGTGAG---G-CATTCATT-TAT-AATA---G--------CAGGTCAG-CC----AAGAACAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4995963 111 +  23392119 A-ATCGTGTTACT-----------GG-CANT-AAGAG----TGC--TGT---TTC--TTTTGGTTAC-CAGA-CAAGGAGGAGG-CA----TA-GAT-AGCAGCAG--------CAAGTCAC-TT----GCGAACACCA--------CCAGCCA-A----------------------CATTAATACA-T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999405 111 +  23407841 A-ATCGTGTTACT-----------GG-CAAT-AAGAG----TGC--TGT---TTC--TTTTGGTTAC-CAGA-CAAGGAGGAAG-CA----TA-GAT-AGCAGCAG--------CAAGTCAC-TT----GCGAACACCA--------CCAGCCA-A----------------------CATTAATACA-T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62486 111 -     66877 A-ATCGTGTTACT-----------GG-CAAT-AAGAG----TGC--TGT---TTC--TTTTGGTTAC-CAGA-CAAGGAGGAAG-CA----TA-GAT-AGCAGCAG--------CAAGTCAC-TT----GCGAACACCA--------CCAGCCA-A----------------------CATTAATACA-T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4654 105 -     12580 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAACTCAT-AT----GAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42712 105 +     53515 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAACTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CATGAATAAG-T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370643 105 -  26074798 A-ATCAGATTGCT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GAGAATAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7532 105 -     34880 A-ATCAGATTGCT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GAGAATAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66627 105 -     89041 A-ATCAGATTGCT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GAGAATAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1782 105 -      5494 A-ATCAGGTTACT-----------GG-CAAC-AAGAG----CAC--TGC---TCC--CTTTGATTGC-CAAA-CAATGAG---G-CA----TT-TAC-AACA---G--------CAGGTCAA-CT----GAGAACTGCA--------CTGGCCA-A----------------------CATTAATACA-T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491733 105 -  27778364 a-atCAGGTCATC-----------AG-CAAC-AAGAA----TGC--TTT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CC----GAGAACAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18566 105 +     27315 A-ATCAGGTCATC-----------AG-CAAC-AAGAA----TGC--TTT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CC----GAGAACAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140541 108 -   4669795 a-acCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44283 108 +     47900 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CG----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAGTAAG-T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44107 108 -     44860 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44096 108 -    148725 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26283 108 -     40656 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6249 108 +     20796 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11366 108 -     17524 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGACCTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27088 108 -     34525 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10869 108 -     25376 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTCC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363465 108 -  39242232 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269181 108 +  21565898 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31555 108 -     45857 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26454 108 -     32606 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGACC-A----------------C--ATTCATTAATAAG-T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2613 108 +      8499 A-ACCAGGTTATT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTCC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25011 107 +     70610 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA-----T-TCT-ACCA---G--------TGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         21980 108 +     36323 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12303  72 -     19938 A-ATCAGGTCACT-----------GA-CAAT-AGGAG----AGC--TGT---TTC--CTCTGGTTAC-CAAA-CAATGAG---G-CA----GT--CT-ACCA---G--------CAGGTCT---------------------------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 46 I 31
s Cheirogaleus_major.k141_666340                             30167 105 -     33796 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4684 105 -     15404 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8530 105 -     32913 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--TTCTGGCTAA-CAGA-CAGTGAG---G-CA----TT-GAT-ACCA---G--------CAAGTCAC-CT----GAGAGCAGCA--------CTAGCCA-A----------------------CATTAGTAAG-T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             18943 105 -     40346 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--TTCTGGCTAA-CAGA-CAGTGAG---G-CA----TT-GAT-ACCA---G--------CAAGTCAC-CT----GAGAGCAGCA--------CTAGCCA-A----------------------CATTAGTAAG-T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19198 105 +    216457 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--TTCTGGCTAA-CAGA-CAGTGAG---G-CA----TT-GAT-ACCA---G--------CAAGTCAC-CT----GAGAGCAGCA--------CTAGCCA-A----------------------CATTAGTAAG-T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           18991 105 +     39636 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--TTCTGGCTAA-CAGA-CAGTGGG---G-CA----TT-GAT-ACCA---G--------CAAGTCAC-CT----GAGAGCAGCA--------CTAGCCA-A----------------------CATTAGTAAG-T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238378  63 -   2543920 --------------------------------------------------------------------CAGA-TGATGAG---G-CA----TT-TAC-AGTA---G--------CAGGTCAC-TT----GAGAACAACA--------CCAGTCA-A----------------------CTTTAACAAG-T
i Chinchilla_lanigera.JH722012.1                         I 31 C 0
s Chiropotes_albinasus.k141_1946120                           3585 105 +      5346 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CATGAATAAG-T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42067 105 -    112038 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAG-CT----GAGAACAGCA--------CCCGCCA-A----------------------CATTAATAAG-T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7638 105 +     34062 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAG-CT----GAGAACAGCA--------CCCGCCA-A----------------------CATTAATAAG-T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342871 108 +  18827391 A-ACCAGGTTACT-----------GG-CAAT-AC-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAGTGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9418 108 -     44032 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304195 108 - 135778131 a-acCAGGTTACT-----------GG-CAAT-AC-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAGTGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14339 105 +     15858 A-ATCAGGTTACT-----------GA-CAAT-AAGAG----TCC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CA----GGGAGCAGCA--------GCCGCCA-A----------------------CACGGATAAG-T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            605915 105 -    839153 a-atCAGGTTACT-----------GA-CAAT-AAGAG----TCC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CA----GGGAGCAGCA--------GCCGCCA-A----------------------CACGGATAAG-T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                338 103 +      2406 A-ATCAGGTCACT-----------GG-A-AA-A-GAG----TAC--TGT---TCC--TTTTGGTTAC-CAAA-CAATAAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CG----GAGAGCAGCA--------CCAGCCA-A----------------------CAACAATAAG-T
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             408624 104 -   2368649 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378500 104 - 200372422 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2049 104 -     84244 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806817 105 +  53390261 a-atcagATTATC-----------AG-TGATTAAAAC----TGC--TTT---TAC--CTTTGGTTAC-CAAA-CAAGGAA---G-CA----TT-TAT-AACA---G--------CAGGTCAT-GG----G-GAAGAACA--------TCAGCCA-A----------------------CATTAATAAG-T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2335 101 -      8242 C-ATCAGGTTATC-----------AG-CAAT-ATGAT----TGC--TTT---TCC--CTTTGGTTAC-CATA-CAATGAG---G-CT----TT-TAT-AACA---G--------CTGGCCAC-CC-------AAG-ACA--------TTGGCCA-A----------------------CATGGAGAAG-T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43831 106 -     83289 A-ATCAGGTTACC-----------GG-CAAT-AAGAG----TGC-TTGT---TCC--CTTTGGTTAC-CAAA-CAATGAA---G-CA----CT-TAT-AACA---G--------CAGGTCAC-CC----AGGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114401 105 - 224834208 A-ATCAGGTTACT-----------GG-CCAT-AAGAG----CAC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----CT-TAT-AGCA---G--------CAGGTCAC-CT----GGGAACTGCA--------CTAGCCA-A----------------------CACTAATAAG-T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               6985 105 +     12657 A-TTCAAGATACC-----------AG-TGAT-AAGTC----TTC--TTT---CCC--TCTTGACTTC-CAGA-CAGTGAG---G-CA----TT-TTT-CAGA---G--------CATGTAAT-TG----GAGAACAGCA--------TCCATTA-A----------------------CATTACTAGT-T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 1877
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3891 105 +     87169 A-ATCAGGTTATC-----------AG-CCAT-AAGAA----TGC--TTT---TTC--CTTTGCTTCC-CAAA-CAATGAG---G-TA----TT-TAT-AACA---G--------CAGGTCAT-TG----GAGAACAACA--------TCAGCCA-A----------------------CATTAATAAG-T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644549 105 -   1526836 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---CCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CC----GAGAGCAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 37 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  17913 105 +     50838 A-ATCAGGTTACT-----------GG-CAGT-AAGAG----TGC--TGT---TCC--CTTTGGCTTT-CAGA-AGACCAG---A-CG----TT-TAT-AACA---T--------CAGGCCAC-TT----AAGAACAACA--------CCAGCCA-A----------------------CATTAATAAG-G
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3882 105 +     36344 A-ATCAGGTTACT-----------GG-CAGT-AAGAG----CGT--TGT---TCC--CTTTGGTTAC-CAGA-TGAGGAG---G-CA----TT-TAT-AGCA---G--------CAGGTCAC-TG----GAGAACAACA--------CCAGCCA-A----------------------CATTAATACG-T
i Cuniculus_paca.CunPac_flattened_line_7025              I 37 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27658 105 +     75252 A-ATCAGGTTACT-----------GG-CAGT-AAGAG----CGC--TGT---TCC--CTTTGGTTAC-CAGA-CGAGGAG---G-TA----TT-TAT-AGCA---G--------CAGGTCAC-TT----GAGAACAATG--------CCAGCCA-A----------------------CATTAATACA-T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109710  64 -   2246927 --------------------------------------------------------------------CAAA-CAGTGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-AGAG-CCAGGGCTGCT--------CCAGCCA-A----------------------CACTCACA---C
i Dasypus_novemcinctus.JH564415.1                        I 31 C 0
s Daubentonia_madagascariensis.ctg71                        292101 106 +  12879189 G-ATCAGGTTACT-----------GG-CAAG-GAGAG----TGC--TGT---TTC--CTTTGGTTAC-CAAACCAATGGG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAATAGCA--------CCAGCCA-A----------------------CTTTAATAAG-T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625321 105 -  35494412 A-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAGGGAG---G-CT----TT-TAT-AATA---G--------CAGGTCTG-CC----GAGAACAGCA--------TAAGCCA-A----------------------CATTAATAAG-T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330016  61 -   2620052 A-GTCAGGTTATC-----------AG-CAAT-AAGAA----TGC--TTT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-TG----CT-TA--A-------------------------------------------------------------------------------------------
i Desmodus_rotundus.KZ672366.1                           n 709 I 36
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664018 105 -   1390856 a-atCAGGTCACC-----------AG-CAAC-AAGAA----TGC--TTT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CC----GAGAACAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138810 105 -    198055 A-ATCAGGTCATC-----------AG-CAAC-AAGAA----TGC--TTT---TCC--CTTTGGTTAC-CAAA-CAGTGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CT----GAGAACAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98423 105 -    115145 A-ATCAGGTCACT-----------GG-CAGG-AAGAG----TAC--TGT---TCT--CCTTGGTTA-CCAGA-CAGTGAG---G-CA----TT-TAC-AGCA---G--------CAGGTCAC-TT----GAGAACAACA--------CCAGCCA-A----------------------CGTTAGCAAG-C
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950021 103 -  37912305 A-ATCAGGTTACT-----------GG-CAAT-CAGAG----CTT--CAT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TTA-AACA---G--------CAGGTCAC-CT----GAGAG--AGA--------GCAGCCA-A----------------------CATTAATAAG-T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   4959 103 -     10735 A-ATCAGGTTACT-----------GG-CAAT-CAGAG----CTT--CAT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TCA-AACA---G--------CAGGTCAC-CT----GAGAG--AGA--------GCAGCCA-A----------------------CATTAATAAG-T
i Dipodomys_stephensi.DipSte_scaffold_89095              I 14 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                  9918 105 +     14636 A-ATCAGGTTACT-----------GG-CAAT-AAGAG----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAAGGAG---G-CA----TT-GAT-AGCA---G--------CAAGTCAC-TT----GAGAACAATG--------CTAGCCA-A----------------------CATCAATACA-T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62854659  80 - 111700974 C-ATCAGGTCACT-----------GG-CAAT-A-GTG----CAC--CGT---TCC--TTTTGGTGAC-CAAA-CAATGAG---G-CC----TT-TAG-AACA---G--------CAGGTCAC-GG----GAGAG--------------------------------------------------------
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5796 103 +     19438 a-atcaGGTTATC-----------AG-CAGT-GAGAA----GG---TTT---TTC--CTTTGGTTAC-CAAA-CAATGAA---G-CA----TT-TGT-AACA---G--------CAGGTCAC-CC----GATAAT-GCA--------TCAGTCA-A----------------------CATTAATAAG-T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239260 105 -    607251 A-ATCAGGTTATC-----------AG-CTGT-AAGAA----TAT--TTT---CCC--CCTTGGTTAC-CAAA-CAGTGAA---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108280  84 -  10337057 A-ATCAAGTTACT-----------GG-CAGT-A---G----TGC--TTT---TCC--CTTTAGT------AA-CAATGAG---A-CA----TT-TAT-AACA---G--------CAGATCAC-CC----GAGAGCAGCC--------CCAGCC-------------------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 10
s Ellobius_lutescens.LOEQ01008920.1                          30549 105 +    110024 A-ATCAGGTTACT-----------GG-CAAT-AAGAG----CAT--TAT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----GT-TAA-AGCA---G--------CGGGTCAC-CT----GGGAACTGTA--------CCAGCTA-A----------------------CACTAAAAAG-T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12520 105 +     18970 A-ATCAGGTTACT-----------GG-CAAT-AAGAG----CGT--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----GT-TAA-AGCA---G--------CGGGTCAC-CT----GGGAACTGTA--------CCAGCCA-A----------------------CACTAATAAG-T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915642 105 +  41312741 a-atCAGGTTATT-----------AG-CAAt-aagaa----tgc--ttt---ttc--ttttggttcc-CAGA-CAATGAG---G-CA----TT-TAG-AACA---G--------CAGGTCAC-CC----GAGAACAGCA--------TCAACCA-A----------------------CATTAATAAG-T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578442 105 +  14770903 a-atTAGGTTATA-----------AG-CAAT-AAGAA----TGC--TTT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------TAAGTCAC-CC----GAGAATAGCA--------TCAGCCA-A----------------------CAATAATAAG-T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3040895 105 -   4378816 a-atCAGGTCACC-----------AG-CAAC-AAGAA----TGC--TTT---TGC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAC-AACA---G--------CAGGTCAC-CC----GAGAACAGCA--------TCAGCCA-A----------------------CATGAATAAG-T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374833 105 +  39960074 a-atCAGGTCACC-----------AG-CAAC-AAGAA----TGC--TTT---TGC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAC-AACA---G--------CAGGTCAC-CC----GAGAACAGCA--------TCAGCCA-A----------------------CATGAATAAG-T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             214 105 -      1194 a-atCAGGTCACC-----------AG-CAAC-AAGAA----TGC--TTT---TGC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAC-AACA---G--------CAGGTCAC-CC----GAGAACAGCA--------TCAGCCA-A----------------------CATGAATAAG-T
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665644  62 +   7059049 --------------------------------------------------------------------TGAA-CAATGAG---T-CG----TT-TAT-AACA---A--------CAGGTCAC-TA----G-GAATAGCA--------CCAGCTA-A----------------------CATTAATAAC-T
i Erinaceus_europaeus.JH835339.1                         I 55 C 0
s Erythrocebus_patas.Contig38                               262398 108 +  21539334 A-ACCAGGTTACT-----------GG-CAAT-AC-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAGTGAG---G-CA----TT-TCT-ACCA---G--------CGAGCCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64661 105 -    133382 A-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CGAA-CAGTGAG---G-CT----GT-TAT-AACA---G--------CAGGTCAG-CC----GAGAACAGCA--------TAAGCCA-A----------------------CATTAATAAG-T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4880 105 +      7672 A-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAGTGAG---G-CT----GT-TAT-AACA---G--------CAGGTCAG-CC----AAGAACAGCA--------TAAGCCA-A----------------------CATTAATAAG-T
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14310 105 -     24895 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TTG--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42019 105 -     70999 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TTG--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAACA--------CCAGCCA-A----------------------CATTAATAAG-T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              85981 105 +    112731 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TTG--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42550 105 +     68309 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TTG--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52876 105 -     65740 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TTG--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23505 105 -     75513 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TTG--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47703 105 -     97555 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TTG--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4427 105 +     30972 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TTT--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42147 105 -     52037 A-ATCAAGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TTG--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAAGAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58549 105 -    111500 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TTG--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246351 107 - 206538554 a-atcaGGTTATC-----------AG-CTGT-AAgaa----tgc--ttttt-ttc--ctttggttcc-cAAA-CAGTGGG---G-CA----CT-TAA-AACA---G--------CAGGTCAC-CG----GAGAACAGCA--------TCAGCCA-A----------------------CATTGATAAG-T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116137 107 - 205367284 a-atcaGGTTATC-----------AG-CTGT-Aagaa----tgc--ttttt-ttc--ctttggttcc-cAAA-CAGTGGG---G-CA----CT-TAA-AACA---G--------CAGGTCAC-CG----GAGAACAGCA--------TCAGCCA-A----------------------CATTGATAAG-T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27234 107 -     30238 A-ATCAGGTTATC-----------AG-CTGT-AAGAA----GGC--TTT-TTTTC--CTTTGGTTCC-CAAA-CAGTGGG---G-CA----CT-TAA-AACA---G--------CAGGTCAC-CG----GAGAACAGCA--------TCAGCCA-A----------------------CATTGATAAG-T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2915958 105 -   3816255 A-ATCATGTTACT-----------GG-CAGT-AAGAG----TGC--TGT---TCC--CTTTGGTTGC-TGGA-CAATGAG---G-CA----TT-TAC-AGCA---G--------CAGGTCGC-TT----GAGAACAACA--------CCAGCCA-A----------------------CATTAATAAG-T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     124547 105 -    137831 A-ATCATGTTTCT-----------GG-CAAT-GAGAT----GGC--TGT---TCC--CTTTGGTTCC-TAAA-CAATAAG---G-CA----TT-TGT-AACA---G--------CAGGGCCC-CT----GAGAACAGTG--------CCAGCCA-A----------------------CGTTAATAAG-T
i Galago_moholi.ctg3793                                  I 66 C 0
s Galago_senegalensis.k141_991736                             8092 105 +     22493 A-ATCATGTTTCT-----------GG-CAAT-GAGAT----GGC--TGT---TCC--CTTTGGTTCC-TAAA-CAATAAG---G-CA----TT-TGT-AACA---G--------CAGGGCCC-CT----GAGAACAGTG--------CCAGCCA-A----------------------CGTTAATAAG-T
i Galago_senegalensis.k141_991736                        I 66 C 0
s Galagoides_demidoff.k141_561628                            20169 105 -     32986 A-ATCATGTTTCT-----------AG-CAAT-GAGAT----GGC--TGT---TCC--CTTAGGTTCC-TAAA-CAATAAA---G-CA----TT-TGT-AACA---G--------TGGGGCCC-CT----GAGAACAGTG--------CCAGCCA-A----------------------CATTAATAAG-T
i Galagoides_demidoff.k141_561628                        I 66 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 703 104 -     28519 A-ATCACGTTGCT-----------GG-CAAT-AAGAG----TGC--TGT---TCC--CATTGGTTAC-CAAA-CAATGAA---G-CA----TT-TAT-AACA---G--------CAGG-CGC-CC----CCAAACAGCA--------CCAGCCA-A----------------------CATGAATAAG-T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      90964 105 -     95226 A-ATCAGATTATC-----------AG-CTGT-AAGAA----TAT--TTT---CCC--CTTCGGTTAC-CAAA-CAATGAA---G-CT----TT-TAT-AATA---A--------CAGGTCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34036 102 -     36801 A-ATCAAGTTACG-----------GG-CAAT-AAGTG----CGC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CG----GAGAACAGCA--------GCAGCCA-A----------------------CATTAATA----
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5352 103 -      8343 T-ATCAGGTTACT-----------GG-CAAC-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-ACA--------GCAGCCA-A----------------------CATTAATGAG-T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254366 103 - 186649187 t-atCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TAT---TCC--CTTTTGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-ACA--------GCAGCCA-A----------------------CATTAATGAG-T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1529 102 -     78134 A-ATCAAGTTACA-----------GG-CAAT-AAGAG----CGC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAT-TG----GAGAACAGCA--------GCAGCCA-A----------------------TATTAATA----
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14235 105 -     40692 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCA--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TC-TAT-AACA---G--------CAGGTCAC-TT----AAGAACAGCA--------CCAGCCA-A----------------------CGTTAATAAG-T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35637 105 +     49394 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCA--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TC-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CGTTAATAAG-T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60505 105 -     66874 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCA--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TC-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGAA--------CCAGCCA-A----------------------CGTTAATAAG-T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9379 105 -     42923 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCA--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TC-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CGTTAATAAG-T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16379 105 -     53142 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCA--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TC-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CGTTAATAAG-T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30321 105 -    327341 A-ATCAGGTTAGC-----------AG-CCAT-AAGAA----GGC--TTT---TTC--CTTTGGTTCC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAT-TG----GAGAACCACA--------TCAGCCA-A----------------------CATTAACAAG-T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8647 104 +     48891 A-ATCAGATTATC-----------AG-CTGT-AAGAA----TAT--TTT---CCC--CTTTGGTTAC--AAA-CAATGAA---G-CT----TT-TAT-AATA---G--------CAGATCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------AGTTAATAAG-T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1931925 105 -  22651954 A-TTCAGGTTACT-----------AG-AAGT-AAGAG----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-CAT-AGCA---G--------CAGGTCAC-TT----GAGAACAAAA--------CCAGCCA-A----------------------CATTAACAAG-T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_870725                  36 106 -       322 A-ATCAAGTCCCT-----------GC-CAGC-A-GAG----TGC--TGT---GCCCCCTCTGGTTTC-ACAA-CAACGAG---G-CT----TT-CAT-TGCC---T--------CGGGTCAC-CA----GAAAGCAGCC--------ACAGGCA-G----------------------TGTCACTAAG-T
i Heterohyrax_brucei.HetBruBak_scaffold_870725           N 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7166 105 -     36432 G-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAATGAA---G-TT----TT-TGT-AATA---G--------CAGGTCAG-CC----AAGAACAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553672 104 -   1711038 a-atCAGGTTATC-----------AG-CAAT-aagat----ttc--ttt---tcc--ctttggttAC-CAAA-CAATGAG---G-CA----TT-TAT-AGTA---G--------CAGGTCAG-CA----GAGAAC-ACA--------TCAGCCa-a----------------------tgttaagaag-t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                587 104 -      2730 A-ATCAGGTTATC-----------AG-CAAT-AAGAT----TTC--TTT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AGTA---G--------CAGGTCAG-CA----GAGAGC-ACA--------TCAGCCA-A----------------------TGTTAAGAAG-T
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142375 103 -    630532 T-ATCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-GCA--------GCAGCCA-A----------------------CATCAATAAA-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69233 105 +     83186 A-ATCAGGTTATC-----------AG-CCAG-AAGAA----TGC--TTT---TTC--CTTTGGTTCC-TAAA-CAATG-G---G-CA----TT-TATTAGAA---G--------CAGGTCAC-CA----GAGAAGAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71403 100 +    143317 A-ATCAGGTTACT-----------GG-CAGT-AAGAG----CAC--TGT---TCC--CTTTGGTTAC-TAGA-CAAGGAG---G-TA----TC-GAT-AGCA---G--------CAGGTCAT-TT----GAGAACAACA--------CCAGCCA-A----------------------CATT-----G-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5410 103 +     12352 T-ATCAGGCTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-GCA--------GCAGCCA-A----------------------CATTAATAAG-T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12594 103 +     55766 T-ATCAGGCTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-GCA--------GCAGCCA-A----------------------CATTAATAAG-T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052192 103 + 191637585 T-ATCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-GCA--------GCAGCCA-A----------------------CATTAATAAG-T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801070 103 +  11177569 T-ATCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-GCA--------GCAGCCA-A----------------------CATTAATAAG-T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4023 104 -    135385 A-ATCAAGGTACT-----------GG-CAGT-AAAAG----TGC--TCT---TCT--CTTTGGTTAC--AGA-CCACGAG---G-CG----TT-TAT-AGCA---G--------CAGGTCAC-CT----GAGAACAGCA--------CCAGCTA-A----------------------CATTAATAAG-T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386386  57 +   7955117 A-ATCAAGTTACA-----------GG-CAAT-AAGCA----TGC--TGT---TCC--CTTTGGTTAC-CAAA-CAACGAG---G-CA----T--------------------------------------------------------------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 28
s Indri_indri.k141_2415743                                    1939 105 +     11955 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CGGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                3130 113 -     16823 A-ATCAGGTTACC-----------AG-CCAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAGTGAG---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CT----GAGAACAGCCAACATTATTAAGCCA-A----------------------CATTAATAAG-T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1239366 105 +   9596543 A-ATCAGGTTATG-----------GG-CAAT-AAGAG----TAC--TGT---TCC--TTTTGGTTAC-CAAA-CAATGAA---G-CA----CT-TAT-AATG---G--------CAGGTCAC-CC----AAGAACACTA--------CCAGCCA-A----------------------CATTAATAAA-T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65380 105 -     97402 A-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAGTGAG---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----GAGAACAGCA--------TAAGCCA-A----------------------CATTAATAAG-T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42807 105 +    110728 A-ATCAGAATACT-----------GG-CAGT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GAGAACAGCA--------CCAGGCC-A----------------------CATTAATAAG-T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62446  65 -     65777 A-ATTAGGTTATA-----------AG-CAAT-AAGAA----TGCCTTTT---TCC--CTTTGCTTAC-CAAA-CAATGAG---G-CA----TG-TAT-AA------------------------------------------------------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_16567                I 60 I 31
s Lemur_catta.scaffold_24                                 14759028 105 +  30322482 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCG--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TC-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CGTTAATAAG-T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3720 105 -     13097 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TTT-ACCA---G--------CAAGTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3474 105 +      5940 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TTT-ACCA---G--------CAAGTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3304 105 -      5717 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-TA----TT-TTT-ACCA---G--------CAAGTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9680 105 -     11567 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TCT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-GA----TT-TAT-ACCA---G--------CAACTCAC-AT----GAGAACAGCA--------CCAGGCA-A----------------------CATTAATAAG-T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11061 105 -     12945 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TCT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-GA----TT-TAT-ACCA---G--------CAACTCAC-AG----GAGAACAGCA--------CCAGGCA-A----------------------CATTAATAAG-T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8543 105 +     29618 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCC--CTTTGGTTGC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8539 105 +     31569 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCC--CTTTGGTTGC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8549 105 +     24756 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCC--CATTGGTTGC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8549 105 +     16388 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCC--CTTTGGTTGC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813053 105 -   3914936 c-atCAGGTTATC-----------GG-CAAT-AAGAA----CGT--TTT---TTC--CTTTGGTTCC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTAAC-CG----GAGAACAGCA--------TTAGCCA-A----------------------CATTAATAAA-T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17408 101 +     24238 A-ATCAGTTTACT-----------GG-CAAT-A-GAG----TTA--TAT---TCC--TTTTGGTTAC-CAAA-CACTGAG---G-CA----TTTT-T-AACA---G--------TAGGTCAC-TT----GAGAACAGCA--------CTGGCTA-A----------------------CATTAATG----
i Lepus_americanus.LepAme_scaffold_56121                 I 25 I 5
s Lipotes_vexillifer.KE559953.1                             334666 105 +    662738 A-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAGTGAG---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----GAGAACAGCA--------TAAGCCA-A----------------------CATTAATAAG-T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333426 108 -   1826925 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---A-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTATTAAG-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10126 105 +     19643 A-ATCATGTTTCT-----------GG-CAAT-GAGAT----GGC--TGT---TCC--CTTTGGTTCC-CAAA-CAATGAG---G-CA----TT-TGT-AACA---G--------CAGGTCCC-CT----GAGAACAGTG--------CCAGCCA-A----------------------CATTAATAAG-T
i Loris_lydekkerianus.k141_2031736                       I 64 C 0
s Loris_tardigradus.ctg83                                  5043789 105 -   6120653 A-ATCATGTTTCT-----------GG-CAAT-GAGAT----GGC--TGT---TCC--CTTTGGTTCC-CAAA-CAATGAG---G-CA----TT-TGT-AACA---G--------CAGGTCCC-CT----GAGAACAGTG--------CCAGCCA-A----------------------CATTAATAAG-T
i Loris_tardigradus.ctg83                                I 64 C 0
s Loxodonta_africana.GL010049.1                           39080557 104 +  43346337 A-AGCAAGTCACT-----------GG-CAAT-A-GAG----TGC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---A-CT----TT-TAT-AACA---T--------CAGGTCAC-CC----AAGAGCAGCA--------CCAATCA-A----------------------CATTAATAAG-T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614189 106 +  59628241 a-atcAGGTTATC-----------AG-CAAT-AAGAC----TGC-TTTT---TTC--CTTTAGTCCC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CT----GAGTACAGCA--------TTAGCCA-A----------------------CATTAATAAG-T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44820 108 -     61512 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGATTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372482 108 -  60120075 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24745 108 +     30207 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21848 108 -     24934 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24698 108 +     30527 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35874 108 -     50087 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45618 108 +     51645 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414820 108 - 187317192 a-accAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399051 108 +  25927173 a-acCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48223 108 -     62418 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CCAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  761 108 +     14901 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44695 108 +     59329 A-ACCAGGTTACT-----------GA-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270603 108 +    668171 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  879 108 +      1732 A-ACCAGGTTACT-----------GG-CAAT-AA-AG----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2401 108 +     17132 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAATAAG-T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222747 103 -    270270 A-ATCAGGTTATC-----------AG-CAGT-GAGAA----TG---TTT---TCC--CTTTGGTTAG-CAAA-CAATGAA---G-CA----TT-TAG-AACA---G--------CAGGTCAT-CT----GAGAAG-GCA--------TCAGTCA-A----------------------CATTAATAAG-T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321890 108 +  24302211 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CG----TT-TCT-ACCA---G--------TGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAGTAAG-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356721 108 -    752769 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CG----TT-TCT-ACCA---G--------TGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTAGTAAG-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673101 104 -    737560 A-GTAAGGTTATC-----------AG-CAAT-GAGAA----TGC--TTT---TCC--CTTTGGTTAC-CAAA-CCACGAG---G-TC----TT-TAT-AACA---G--------CAGGTCAC-cc----aaggacag-a--------tcagcca-g----------------------caTTAATAAG-T
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                             220389 104 +    317179 a-GTAAGGTTATC-----------AG-CAAT-GAGAA----TGC--TTT---TCC--CTTTGGTTAC-CAAA-CCATGAG---G-TC----TT-TAT-AACA---G--------CAGGTCAC-CC----AAGGACAG-A--------TCAGCCA-A----------------------CATTAATAAG-T
i Manis_pentadactyla.KN006162.1                          C 0 I 1
s Marmota_marmota.CZRN01000018.1                           7500606  57 +  40650429 A-ATCAAGTTACA-----------GG-CAAT-AAGCA----TGC--TGT---TCC--CTTTGGTTAC-CAAA-CAACGAG---G-CA----T--------------------------------------------------------------------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 28
s Megaderma_lyra.MegLyr_scaffold_4542                       149937 104 +    207569 A-ATCAGGTTATC-----------GG-CAAT-TAGAT----TGC--CTT---TTT--CTTTGGTTAC-AAGA-CAATGAG---G-CA----TT-TAT-CACG---G--------GAGGTCAC-CT----GAAAAC-ACA--------TCAGCCA-A----------------------CGTTAGGAAG-T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 14 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25742 105 -     74585 A-ATGAGGTTATC-----------AG-CAGT-AAGAA----TGC--TTT---TTC--TTTTGGTTCC-CAAA-CAATGAG---G-CA----TT-TAG-AACA---A--------CAGGTCAC-CC----GAGAACAGCA--------TCAACCA-A----------------------CAGTAATAAG-T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49688 103 -    140813 A-ATCAGGTTACT-----------GG-CAGT-AAGAG----TTC--TGT---TC---ATTTGGTTAC-CAAA-CAATAAA---A-CA----CT-TA--AGCA---G--------CAGGTCAC-CT----GAGTGTAGCA--------TCAGCCA-A----------------------CATTAATAAA-T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428781 109 +  29670104 A-ATCAGATTACT-----------GG-CAAT-AAGAGCGAGCGC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----CT-TAC-AGCA---G--------CAggtcac-ct----gggaactgca--------ccaGCCA-A----------------------CACTAATAAG-T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     80965 105 +     93471 A-ATCAGCTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAGTGAG---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----GAGAACAGCA--------TAAGCCA-A----------------------CATTAATAAG-T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9845 105 +     17804 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAACTCAC-AT----GAGAACAGCG--------CCAGCCA-A----------------------CATTAATAAG-T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10347 105 -     12984 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAACTCAC-AT----GAGAACAGCG--------CCAGCCA-A----------------------CATTAATAAG-T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18661 105 -     26561 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAACTCAC-AT----GAGAACAGCG--------CCAGCCA-A----------------------CATTAATAAG-T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984151 105 +  93316391 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45691 105 +    145209 AAATCAGGTCACT-----------GG-CAAT-A-GGG----TGC--TGT---TCC--TTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CA----GAGAGCAGCA--------TCAGCCA-A----------------------GAGTAATAAG-T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184670  61 +    200668 A-ATCAGATTGTC-----------AG-CAAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAT-CAAA-CAATGAG---G-TG----CT-TG--A-------------------------------------------------------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 19 I 36
s Microtus_ochrogaster.CM001695.1                         15961986 105 +  27267610 A-ATCAGGTTACT-----------GG-CAAT-AAGAG----CGC--TGT---TCT--CTTTGGTTAC-CAAA-CAATGAG---G-CA----GT-TAA-AGCA---G--------CGGGTCAC-CT----GGGAACTGTA--------CCAGCCA-A----------------------CACTAATAAG-T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362793 105 -   8254450 a-attAGGTCGTC-----------AG-CAAT-AACAG----TGC--CTT---TTC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AGCA---G--------TAAGTCAC-CT----GAGAATAGTA--------TCAGCCA-A----------------------CATTAATAAG-T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41700 105 -     48117 A-ATTAGGTCGTC-----------AG-CAAT-AACAG----TGC--CTT---TTC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AGCA---G--------TAAGTCAC-CT----GAGAATAGTA--------TCAGCCA-A----------------------CATTAATAAG-T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         21907 108 -     27822 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTCAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTCATTAATAAG-T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8060 105 +     27589 C-ATCAGGTTATC-----------GG-CAAT-AAGAA----CGC--TTT---TTC--CTTTGGTTCC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CA----GAGAACAGCA--------TTAGCCA-A----------------------CATTAATAAA-T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     51947 105 -     62432 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCC--CTCTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACGGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   353064 105 +    437263 A-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAGGGAG---G-CT----TT-TAT-AATA---G--------CGGGTCAG-CC----AAGAACAGCA--------TAAGCCA-A----------------------CATTAATAAG-T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178851  61 +    366855 A-ATCAGGTTGTT-----------AG-CAAG-AAGAA----TGC--TTT---TCC--TTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TA--A-------------------------------------------------------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 36
s Moschus_moschiferus.MosMos_scaffold_13123                  25082 105 -     82753 A-ATCAGATTATC-----------AG-CTAT-AAGGG----TAT--TTT---CCC--CTTTGGTTAC-CAAA-CAATGAA---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----TAGACTAGCA--------TCCGCCA-A----------------------CATTAATAAG-G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18072 105 -     63510 A-ATCAGGTTATC-----------AG-CCAT-ACTAA----GGC--TTT---TTC--CTTTGGTTCC-CAAA-CAATGAG---G-CA----TT-TAT-CACA---G--------CAGGTCAT-CG----GAGAACAACA--------TCAGCCA-A----------------------CATTAACAAG-T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38760 105 +     47283 A-ATTAGGTTATA-----------AG-CAAT-AGGGA----TGC--TTT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-AGCA---G--------TAAATCAT-CT----GAGAATAGCA--------TCAGCCA-A----------------------CAATAATAAG-T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592717 104 + 120012414 A-ATCAGGTTACT-----------GG-CAAG-AAGAG----TGC--TGT---TCC--CTTTGCTTAC-CTCA-CACTGAA---G-CA----CT-TA--AACA---G--------CAGGTCAC-TT----GAGTACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687102 104 + 129401213 A-ATCAGGTTACT-----------GG-CAAG-AAGAG----TGC--TGT---TCT--CTTTGCTTAC-CTCA-CACTGAA---G-CA----CT-TA--AACA---G--------CAGGTCAC-TT----GAGTACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39496398 104 + 130317789 A-ATCAGGTTACT-----------GG-CAAG-AAGAG----TGC--TGT---TCC--CTTTGCTTAC-CTCA-CAATGAA---G-CA----CT-TA--AACA---G--------CAGGTCAC-TT----GAGTACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82865 102 -     86153 A-ATCAAGTTACA-----------GG-CAAT-AAGAG----TGT--GGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TG----GAGAACAGCA--------GCAGCCA-A----------------------TATTAATA----
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354675 105 +  14710649 a-atCAGGTTATC-----------CG-CAGT-aagaa----tac--ttt---ttc--ttttggttcc-cAAA-CAATGAG---G-CA----TT-TAG-AACA---G--------CAGGTCAC-CC----GAGAACAGCA--------TCAACCA-A----------------------CATTAGTAAG-T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     62694 105 +     67721 A-ATCAGGTAACT-----------GA-CAGT-AAGAG----TGC--TGT---TCT--CTTTGGTTTG-CAGA-AAAGGAG---A-CA----TT-TAT-AGCA---T--------CAGGTCAT-TT----GAGAACAACA--------CCAGCCA-A----------------------CATTAATAAG-G
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793047 104 +  10118263 a-acTAGGTTATA-----------AA-CAAT-AAGAA----TGC--TTT---TTC--CTTTGGTTAG-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------TAAGTCAC-CC-----AGAATAGCA--------TCAGCCA-A----------------------CAATAATAAG-T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387176 105 +   6019432 a-acTAGGTTATA-----------AA-CAAT-AAGAA----TGC--TTT---TCC--CTTTGGTTAG-CAAA-CAATGAG---G-CA----TT-TAT-AATA---G--------TAAGTCAC-CC----GAGAATAGCA--------TCAGCCA-A----------------------CAATAATAAG-T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383004 104 +   4330536 a-acTAGGTTATA-----------AA-CAAT-AAGAA----TGC--TTT---TCC--CTTTGGTTAG-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------TAAGTCAC-CC-----AGAATAGCA--------TCAGCCA-A----------------------CAATAATAAG-T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1812 105 +     18357 A-ACTAGGTTATA-----------AA-CAAT-AAGAA----TGC--TTT---TCC--CTTTGGTTAG-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------TAAGTCAC-CC----GAGAATAGCA--------TCAGCCA-A----------------------CAATAATAAG-T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119300 106 +    130748 A-ATCAGGTTACT-----------GA-CAAT-GAGAG----TCC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-TC----TT-TAT-AACA---G--------CAGGTCAT-CC----GAGAGCAGCA--------CCAGCCTTG----------------------CATGAATAAG-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945834 116 +   3037898 A-ATCAGGTTACTGGTAGTAAGCTGG-CAGT-AAGAG----TGC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAA---G-CA----CT-TAC-AGCA---G--------CAGGTCAC-CA----GAGAACAGCA--------CCGGCCA-A----------------------CATTGGTAAG-T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28549 104 +     34575 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1227234 105 -   7148211 A-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAGGGAG---G-GT----TT-TAT-AATA---G--------CAGGTCAG-CC----GAGAACAGCA--------TAAGCCA-A----------------------CATTAATAAG-T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127788  61 -    149072 C-ATCAG-TTATC-----------AG-CAAT-AAGAA----TGC--TTT---TCC--CTTTGGTTTC-CAAA-CAATGAG---G-CA----TT-TGT-T-------------------------------------------------------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 36
s Nomascus_annamensis.k141_1771965                           53303 103 -    132029 T-ATCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-GCA--------GCAGCCA-A----------------------CATTAATAAG-T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9398 103 -     16345 T-ATCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-GCA--------GCAGCCA-A----------------------CATTAATAAG-T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15283 103 +     22201 T-ATCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-GCA--------GCAGCCA-A----------------------CATTAATAAG-T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413504 103 -  22158432 T-ATCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-GCA--------GCAGCCA-A----------------------CATTAATAAG-T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25681 103 -     54323 T-ATCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-GCA--------GCAGCCA-A----------------------CATTAATAAG-T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197783 106 +   9404916 a-atcAAGTTATC-----------AG-CAAT-AAGAC----TGC-TTTT---TTC--CTTTAGTCCC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CT----GAGTACAGCA--------TTAGCCA-A----------------------CATTAATAAG-T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636148 105 + 196305487 A-ATCATGTTTCT-----------GG-CAAT-GAGAT----GGC--TGT---TCC--CTTTTGGTTC-CCAA-CAATGAG---G-CA----TT-TGT-AACA---G--------CAGGTCCC-CT----GAGAACAGTG--------CCAGACA-A----------------------CATTAATAAG-T
i Nycticebus_bengalensis.LG01                            I 66 C 0
s Nycticebus_coucang.k141_3846325                             2902 105 -      3937 A-ATCATGTTTCT-----------GG-CAAT-GAGAT----GGC--TGT---TCC--CTTTTGGTTC-CCAA-CAATGAG---G-CA----TT-TGT-AACA---G--------CAGGTCCC-CT----GAGAACAGTG--------CCAGACA-A----------------------CATTAATAAG-T
i Nycticebus_coucang.k141_3846325                        I 66 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564407 105 - 199412804 A-ATCATGTTTCT-----------GG-CAAT-GAGAT----GGC--TGT---TCC--CTTTTGGTTC-CCAA-CAATGAG---G-CA----TT-TGT-AACA---G--------CAAGTCCC-CT----GAGAACAGTG--------CCAGACA-A----------------------CATTAATAAG-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 66 C 0
s Octodon_degus.JH651603.1                                11054646 105 -  11899542 A-ATCAGGTTACT-----------GG-TAGT-AAGAG----TGC--TGT---TCC--CTTTGGTTTT-CAGA-AGATGAG---A-CA----TT-TAT-AGCA---T--------CAGGCCAC-TT----AAGAACAACA--------CCAGCCA-A----------------------CATTAATAAG-G
i Octodon_degus.JH651603.1                               I 24 C 0
s Odobenus_rosmarus.KB229312.1                             1451252 105 +   2017862 c-atCAGGTTATC-----------GG-Caat-aagaa----tgc--ttt---ttc--ctttgGTTCC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CG----GAGAACAGCC--------TCAGCCA-A----------------------CATTAATAAA-T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435850 105 -    630418 A-ATCAGATTATC-----------AG-CTGT-AAGAA----TAT--TTT---CCC--CTTTGGCTAC-CAAA-CAGTGAA---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13847 105 +    150152 A-ATCAGATTATC-----------AG-CTGT-aagaa----tat--ttt---cct--ctttgGTTAC-CAAA-CAATGAA---G-CT----TT-TAT-AATA---A--------CAGGTCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Okapia_johnstoni.LVCL01S0005463.1                      I 25 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92342 105 -    140218 A-ATCAGGTTACT-----------GG-CAAT-GAGAG----CGC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----GT-TAA-AGCA---G--------CAGGTCAC-CT----GGGAACTGTA--------CCAGCCA-A----------------------CACTAATAAG-T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3223 105 -     41509 A-ATCAGGTTACT-----------GG-CAAT-AAGAG----CAC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAA---A-CA----CT-TAG-AGCA---G--------CAGGTCAC-CA----GGGAACTGCA--------CCAGCCA-A----------------------CACTAATAAG-T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096516 105 +  10937097 A-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAGTGAG---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----GAGAACAGCA--------TAAGCCA-A----------------------CATTAATAAG-T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13400 104 -     14239 A-ATCAGGTCACT-----------GG-CAAT-A-GAG----TGC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAA---G-CA----TT-TAT-AACC---T--------CAGGTCAC-CT----GAGAGCAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103201 100 - 174332312 A-ATCAGTTTACT-----------GG-CAAT-A-GAG----TTC--TAT---TCC--CTTTGGTTAC-CGAA-CACTGAG---G-CA----TT-T-T-AACA---G--------TAGGTCAC-TT----GAGAGCAGCA--------CTGGCTA-A----------------------CATTAATA----
i Oryctolagus_cuniculus.CM000791.1                       I 25 I 5
s Otocyon_megalotis.JAEUCK010005147.1                        38829 106 +    559221 a-atcAGGTTATC-----------AG-CAAT-AAGAC----TGC-TTTT---TTC--CTTTAGTCCC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CT----GAGTACAGCA--------TTAGCCA-A----------------------CATTAATAAG-T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39708 105 -     51505 A-ATCATGTTTCT-----------GG-CAAT-GAGAT----GGC--TGT---TCC--CTTTGGTTCC-TAAA-CAATAAG---G-CA----TT-TGT-AACA---G--------CAGGGCCC-CT----GAGAACAGTG--------CCAGCCA-A----------------------CGTTAATAAG-T
i Otolemur_crassicaudatus.k141_649260                    I 66 C 0
s Otolemur_garnettii.GL873799.1                             352711 105 +   1103335 A-ATCATGTTTCT-----------GG-CAAT-GAGAT----GGC--TGT---TCC--CTTTGGTTCC-TAAA-CAATAAG---G-CA----TT-TGT-AACA---G--------CAGGGCCC-CT----GAGAACAGTG--------CCAGCCA-A----------------------CGTTAATAAG-T
i Otolemur_garnettii.GL873799.1                          I 66 C 0
s Ovis_aries.CM001607.2                                   26403767 105 -  44047080 A-ATCAGATTATC-----------AG-CTGT-AAGAA----TAT--TTT---CCC--CTTTGGTTAC-CAAA-CAATGAA---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CGTTAATAAG-T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4286 105 +     17875 A-ATCAGATTATC-----------AG-CTGT-AAGAA----TAT--TTT---CCC--CTTTGGTTAC-CAAA-CAATGAA---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CGTTAATAAG-T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             12001 106 -     26668 T-ATCAGGTTACT-----------GGCCAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-AAGA-CAATGAG---GCCA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-ACA--------GCAGCCA-A----------------C-----CATTAATGAG-T
i Pan_troglodytes.NBAG03003091.1                         C 0 I 30
s Panthera_onca.PanOnc_flattened_line_3271                   24059 105 -    230217 A-ATCAGGTTATC-----------AG-CTGT-AAGAA----TGC--TTT---TTC--CTTTGGTTCC-CAAA-CAATGGG---G-CA----CT-TAA-AACA---G--------CAGGTCAC-CG----GAGAACAGCA--------TCAGCCA-A----------------------CATTGATAAG-T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461385 105 -  18783137 a-atCAGGTTATC-----------AG-CTGT-AAGAA----TGC--TTT---TTC--CTTTGGTTCC-CAAA-CAATGGG---G-CA----CT-TAA-AACA---G--------CAGGTCAC-CG----GAGAACAGCA--------TCAGCCA-A----------------------CATTGATAAG-T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972044 105 +   8748460 a-atCAGGTTATC-----------AG-CTGT-AAGAA----TGC--TTT---TTC--CTTTGGTTCC-CAAA-CAGTGGG---G-CA----CT-TAA-AACA---G--------CAGGTCAC-CG----GAGAACAGCA--------TCAGCCA-G----------------------CACTGATAAG-T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615282 105 +   2937107 A-ATCAGATTGTC-----------AG-CTGT-AAGAA----TAT--TTT---CCC--CTTTGCTTAC-CAAA-CAATGAA---G-CT----TT-TAT-AATA---G--------CAGATCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242723 108 - 183742232 a-acCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---A-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTATTAAG-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9185 108 +     21308 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---A-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTATTAAG-T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291759 108 -  20919399 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---A-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTATTAAG-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21833 108 -     27687 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---A-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTATTAAG-T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    14979 108 +     16796 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---A-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTATTAAG-T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21790 108 -     23640 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---A-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTATTAAG-T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14653 104 +     78924 A-ATCTGGTTATC-----------A--CCAT-AAGAA----TGC--TTT---TTC--CTTTGCTTCC-CAAA-CAATGAG---A-CA----TT-TAT-AATA---G--------CAGGTCAC-CC----GAGAACAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          25941  74 +     31479 ------------------------------------------------------C--CTTTGGTTCC-CAAA-CAATGAG---G-CA----TT-TGT-TACA---G--------CAGGTCCC-CT----GAGAACAGTG--------CCAGCCA-A----------------------CATTAATAAC-T
i Perodicticus_ibeanus.k141_1921260                      I 92 C 0
s Perodicticus_potto.k141_1854441                            18310  74 -     24908 ------------------------------------------------------C--CTTTGGTTCC-CAAA-CAATGAA---G-CA----TT-TGT-TACA---G--------CAGGTCCC-CT----GAGAACAGTG--------CCAGCCA-A----------------------CATTAATAAG-T
i Perodicticus_potto.k141_1854441                        I 92 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1355 105 +      9367 A-ATCAGGCTACT-----------GG-CAAT-AAGAG----CAC--TGT---TCC--CTTTGGTTAC-CAAT-GAATGAG---A-CA----TT-TAA-AACA---G--------CAGGTCAC-CT----GAGAACAACA--------TGAGCCA-A----------------------CATTAATAAG-T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246422 104 +  18517816 A-ATCAGGTTACT-----------GG-CAAT-AAGAG----CGC--TGT---TCC--CTTTGGTTAC-CAAA-CAAAGAA---G-CA-----T-TAG-AGCA---G--------CAGGTCAC-CT----GGGAACTGCA--------CCAGCCA-A----------------------CACTAATAAG-T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31528 105 -     56120 A-ATCAGGTTGCT-----------GG-CAGT-AAGAG----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAA---G-TA----TT-TAT-AACA---G--------CAAGTCCC-TG----GAGAACAACA--------CTGGCCA-G----------------------TGTTAATAAG-T
i Petromus_typicus.PetTyp_scaffold_17301                 I 24 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12360 105 -     15039 A-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAGGGAG---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----AAGAACAGCA--------TAAGCCA-A----------------------CATTAATAAG-T
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2007 104 +     55023 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAGTAAG-T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1557 104 -     89929 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAGTAAG-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2146 104 +     40849 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAGTAAG-T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253810 104 +  14605196 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAGTAAG-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3349 105 +     22231 A-ATGAGGTTATA-----------AG-CAAT-GAGAA----TCC--TTT---TCC--CTTTGGTTAC-CAAA-CAACGAG---G-CA----TT-TAT-AACA---G--------TAAGTCAC-CG----GAGAATAGCA--------CCAGCCA-A----------------------AAATAAGAAG-T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64435 105 +    207309 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAG-CT----GAGAACAGCA--------CCCGCCA-A----------------------CATCAATAAG-T
i Pithecia_albicans.k141_1239476                         I 10 C 0
s Pithecia_chrysocephala.k141_785207                          5529 105 -     25401 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAG-CT----GAGAACAGCA--------CCCGCCA-A----------------------CATCAATAAG-T
i Pithecia_chrysocephala.k141_785207                     I 10 C 0
s Pithecia_hirsuta.k141_640380                               31271 105 +     58159 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAG-CT----GAGAACAGCA--------CCCGCCA-A----------------------CATCAATAAG-T
i Pithecia_hirsuta.k141_640380                           I 10 C 0
s Pithecia_mittermeieri.k141_1280039                         31547 105 +     63561 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAG-CT----GAGAACAGCA--------CCCGCCA-A----------------------CATCAGTAAG-T
i Pithecia_mittermeieri.k141_1280039                     I 10 C 0
s Pithecia_pissinattii.k141_878371                           31307 105 +     51148 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAG-CT----GAGAACAGCA--------CCCGCCA-A----------------------CATCAATAAG-T
i Pithecia_pissinattii.k141_878371                       I 10 C 0
s Pithecia_pithecia.tarseq_165                              556278 105 -   4542175 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAG-CT----GAGAACAGCA--------CCCGCCA-A----------------------CATCAATAAG-T
i Pithecia_pithecia.tarseq_165                           I 10 C 0
s Pithecia_vanzolinii.k141_1369553                           31291 105 +     51125 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAG-CT----GAGAACAGCA--------CCCGCCA-A----------------------CATCAATAAG-T
i Pithecia_vanzolinii.k141_1369553                       I 10 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4450 105 -      8168 A-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAGTGAG---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----GAGAACAGCA--------TAAGCCA-A----------------------CACTAATAAG-T
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7698 105 +     39866 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAGTGAG---G-CA----TT-GAT-ACCA---G--------CAAGTCAC-CT----GAGAGCAGCA--------CCAGCCA-A----------------------CATTAGTAAG-T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2782 105 -      9282 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAGTGAG---G-CA----TT-GAT-ACCA---G--------CAAGTCGC-CT----GAGAGCAGCA--------CCAGCCA-A----------------------CATTAGTAAG-T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42186 105 -     87950 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAGTGAG---G-CA----TT-GAT-ACCA---G--------CAAGTCAC-CT----GAGAGCAGCA--------CCAGCCA-A----------------------CATTAGTAAG-T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42580 105 -     88961 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAGTGAG---G-CA----TT-GAT-ACCA---G--------CAAGTCAC-CT----GAGAGCAGCA--------CCAGCCA-A----------------------CATTAGTAAG-T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7278 105 -     39403 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAGTGAG---G-CA----TT-GAT-ACCA---G--------CAAGTCGC-CT----GAGAGCAGCA--------CCAGCCA-A----------------------CATTAGTAAG-T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42229 105 +     87928 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAGTGAG---G-CA----TT-GAT-ACCA---G--------CAAGTCGC-CT----GAGAGCAGCA--------CCAGCCA-A----------------------CATTAGTAAG-T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7275 105 -     60166 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAGTGAG---G-CA----TT-GAT-ACCA---G--------CAAGTCAC-CT----GAGAGCAGCA--------CCAGCCA-A----------------------CATTAGTAAG-T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14212 105 -     67232 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAGTGAG---G-CA----TT-GAT-ACCA---G--------CAAGTCAC-CT----GAGAGCAGCA--------CCAGCCA-A----------------------CATTAGTAAG-T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42128 105 -     90634 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAGTGAG---G-CA----TT-GAT-ACCA---G--------CAAGTCAC-CT----GAGAGCAGCA--------CCAGCCA-A----------------------CATTAGTAAG-T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43595 105 +     89403 A-ATCAGGTTACT-----------GG-CAGT-AAGAA----TGC--CGT---TCC--CTCTGGCTAA-CAGA-CAGTGAG---G-CA----TT-GAT-ACCA---G--------CAAGTCAC-CT----GAGAGCAGCA--------CCAGCCA-A----------------------CATTAGTAAG-T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177519 103 - 189387572 t-atCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-GCA--------GCAGCCA-A----------------------CATTAATAAG-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192336 103 -   9816681 T-ATCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-GCA--------GCAGCCA-A----------------------CATTAATAAG-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              27132 104 +     69807 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--CGT---TCC--CTTTGGTTAC-CAGA-CAGTGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44318 104 -     80239 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--CGT---TCC--CTTTGGTTAC-CAGA-CAGTGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_845924                  166  87 -       422 A-ATCAAGTCCCT-----------GC-CAGC-A-GAG----TGC--TGT---GCCCCCTCTGGTTTC-ACAA-CAACGAG---G-CT----TT-CAT-TGCC---T--------CGGGTCAC-CA----GAGAGCAGCA---------------------------------------------------
i Procavia_capensis.ProCapCap_scaffold_845924            C 0 N 0
s Prolemur_simus.MPIZ01000396.1                            1982183 105 +   4620579 a-atCAGGTTACT-----------GA-CATC-GAGAG----TGC--TGT---TCG--CTTTGGTTAC-CAAA-CAACGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CGTTAATAAG-T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565688 105 -   2598838 a-atCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCT--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CTAGCCA-A----------------------CATTAATAAG-T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3326 105 -      7103 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCT--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             3923 105 -     11706 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCT--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7661 105 -     30655 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCT--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          33974 105 +     46564 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCT--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94253 105 -     98465 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCT--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7892 105 +     35169 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCT--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37030 103 +     52041 a-atcaGGTTACT-----------GG-CAAT-AAGAA----TTC--TGT---TC---ATTTGGTTAC-CAAA-CAATGAA---G-CA----CT-TA--AGCA---G--------CAGGTCAC-CT----GAGTGTAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51752  61 -     66298 A-ATCAGGTTCTC-----------AG-CAAT-AAGAA----TGC--TTT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----GT-TA--A-------------------------------------------------------------------------------------------
i Pteronotus_parnellii.KE847780.1                        C 0 I 33
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4245 105 -     18639 A-ATCAGGTTATC-----------AG-CAGT-AAGAA----TGC--ATT---TTC--TTTTGATTCC-CAGA-CAGTGAG---G-CA----TT-TAG-AACA---G--------CAGGTCAC-CC----GAGAACAGCA--------TCAACCA-A----------------------CATTAATAAG-T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840435 103 -  28871421 G-ATCAGATTATC-----------AG-CAGT-GAGAA----TG---TTT---TCC--CTTTGGTTAC-CAAA-CAATGAA---G-CA----TT-TGT-AACA---G--------CAGGTCAC-CC----AAGGAC-GCA--------TCAGTCA-A----------------------CATTAATAAG-T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3536946 111 -   4952924 G-ATCAGATTATC-----------AG-CAGT-GAGAA----TG---TTT---TCC--CTTTGGTTAC-CAAA-CAATGAA---G-CA----TT-TGT-AACA---GCAGGTCAGCAGGTCAC-CC----AAGAAC-GCA--------TCAGTCA-A----------------------CATTAATAAG-T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098699 108 +  38429054 a-atCAGGTTATC-----------AG-CTGT-Aagaa----tgc--tttttcttc--ctttggttcC-CAAA-CAGTGGG---G-CA----CT-TAA-AACA---G--------CAGGTCAC-CG----GAGAACAGCA--------TCAGCCA-A----------------------CATTGATAAG-T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26506 104 +     91421 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  152998 104 -   7812017 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7373 104 +     72585 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52769 105 +     55069 A-ATCAGATTATC-----------AG-CCGT-AAGAA----TAT--TTT---CCC--CTTTGGCTAC-CAAA-CAGTGAA---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022324 104 -  90668790 A-ATCAGGTTACT-----------GG-CAAG-AGCAG----TGC--TGT---TCC--CTTTCGTTAC-CTCA-CAATGAA---G-CA----CT-TA--AACA---G--------CAGGTCAC-CT----GAGTACAGCA--------CCAGCCA-A----------------------CATTAATAAC-T
i Rattus_norvegicus.chr16                                I 62 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914325 104 +   3329780 a-attAGATTATC-----------AG-CAAT-AAAAT----TGC--TTT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----CT-TAT-AATA---G--------CATGTCAC-CG----GAGCAC-ACA--------TCAGCCA-A----------------------CGTTAAGAAG-T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             1083 104 +      7119 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121691 104 + 195417433 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             235933 104 -   7961872 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74365 103 -    116970 A-ATCAGATTATC-----------AG-CAGT-GAGAA----TG---GTT---TCC--CTTTGGTTAC-CAAA-CAAGGAA---G-CA----TT-TGT-CACA---G--------CAGGTCAT-CC----GAGAAC-ACA--------TCAGTCA-A----------------------CATTAATAAG-T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3583 105 +     27962 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CATGAATAAG-T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3478 105 +      6077 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CATGAATAAG-T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3568 105 +      5971 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CAGTAATAAG-T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3489 105 +      5932 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CAGTAATAAG-T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1831 105 -      4390 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CAGTAATAAG-T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391268 105 - 209938924 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CATGAATAAG-T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3438 105 +      5979 A-ATCAGGTTACT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CAGTAATAAG-T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                 21  91 -     22275 ---------------------------CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-AT----GAGAACAGCA--------CCAGCCA-A----------------------CATGAATAAG-T
i Saguinus_oedipus.k141_1280589                          N 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7440 105 +     16473 A-ATCAGATTATC-----------AG-CTGT-AAGAA----TAT--TTT---CCC--CTTTGCTTAC-CAAA-CAATGAA---G-CT----TT-TAT-AATA---T--------CAGGTCAG-CC----TAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108605 105 + 121099817 a-atCAGGTTGCT-----------GG-CAAT-AAGAG----TGC--TGT---TCC--CTCTGGCTAA-TGGA-CAATGAG---C-CG----TT-TAT-ACCA---G--------CAAGTCCC-GT----GAGAATAGCC--------CCAGCCA-A----------------------CATTAATAAG-C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30172 105 -     47369 A-ATCAGGTTGCT-----------GG-CAAT-AAGAG----TGC--TGT---TCC--CTCTGGCTAA-TGGA-CAATGAG---C-CG----TT-TAT-ACCA---G--------CAAGTCCC-GT----GAGAATAGCC--------CCAGCCA-A----------------------CATTAATAAG-C
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30558 105 -     79414 A-ATCAGGTTGCT-----------GG-CAAT-AAGAG----TGC--TGT---TCC--CTCTGGCTAA-TGGA-CAATGAG---C-CG----TT-TAT-ACCA---G--------CAAGTCCC-GT----GAGAATAGCC--------CCAGCCA-A----------------------CATTAATAAG-C
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27249 105 -     34454 A-ATCAGGTTGCT-----------GG-CAAT-AAGAG----TGC--TGT---TCC--CTCTGGCTAA-TGGA-CAATGAG---C-CG----TT-TAT-ACCA---G--------CAAGTCCC-GT----GAGAATAGCC--------CCAGCCA-A----------------------CATTAATAAG-C
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14652 105 -     22428 A-ATCAGGTTGCT-----------GG-CAAT-AAGAG----TGC--TGT---TCC--CTCTGGCTAA-TGGA-CAATGAG---C-CG----TT-TAT-ACCA---G--------CAAGTCCC-GT----GAGAATAGCC--------CCAGCCA-A----------------------CATTAATAAG-C
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29804 105 -     47109 A-ATCAGGTTGCT-----------GG-CAAT-AAGAG----TGC--TGT---TCC--CTCTGGCTAA-TGGA-CAATGAG---C-CG----TT-TAT-ACCA---G--------CAAGTCCC-GT----GAGAATAGCC--------CCAGCCA-A----------------------CATTAATAAG-C
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237861 105 +   5703754 A-ATCAGGTTGCT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GAGAATAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7451 105 +     21866 A-ATCAGGTTGCT-----------GG-CAAT-AAGAA----TGC--TGT---TCC--CTCTGGCTAA-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-GT----GAGAATAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115508 104 +    313613 A-ATCAGATTATC-----------AG-TGAT-AAAAC----TTC--TTT---TCC--TTCTGGTTAC-CAAA-CAATGAA---G-CA----TT-TAT-AACA---G--------CAGGTCAT-GG----G-GAACAACA--------TCAGCCA-A----------------------TATTAATAAG-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24825 104 +     27374 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAGTAAG-T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28339 104 +     58920 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAGTAAG-T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14835 104 -     45317 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAGTAAG-T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22494 104 -     42441 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAGTAAG-T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25172 104 -     29113 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAGTAAG-T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28246 104 -     48123 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAGTAAG-T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48804 105 +     77746 A-ATCAGGTTACT-----------GG-CAAG-AAGAG----CAC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAA---G-CA----CT-TAT-AGCA---G--------CAGGTCAC-CT----GGGAACAGCA--------CCAGCCA-A----------------------CGTTAATAAG-T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857854 105 -   1910179 A-CTCAGGTTACC-----------AT-CAGT-AAGAA----TGC--TTT---TCC--CTCTGGTTAT-CAAA-CAATGAG---G-CA----TT-TAT-AGCA---G--------CAGGTCAT-CG----GAGAACAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4670941 102 +  18376816 C-ATCAAATTACC-----------AG-TGAt-aact-------t--ttt---tcc--ctttgatttc-caGT-CAGTGAG---A-CA----TT-TGT-AAGA---G--------CAGATCAT-GG----GAGAACACCA--------TCCTTTA-A----------------------CATTAATGTT-T
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1867965  57 +   3870691 A-ATCAAGTTACA-----------GG-CAAT-AAGCA----TGC--TGT---TCC--CTTTGGTTAC-CAAA-CAACGAG---G-CA----T--------------------------------------------------------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 28
s Spilogale_gracilis.SpiGra_flattened_line_13525              6314 104 -     97271 A-ATCAGGTTATC-----------AA-CAGT-AAGGA----TGC--TT----TCC--CTTTGGTTCC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CC----GAGAACAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124475 105 +    196729 A-ATCAGGTTATC-----------AG-CCAT-AAGAA----GGC--TTT---TTC--CTTTGGTTCC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAT-CG----GAGAACAACA--------TCAGCCA-A----------------------CATTAACAAG-T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643366 105 +  69701581 A-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TTT-AATA---G--------CAGGTCAG-CC----AAGAACAGTA--------TCAGTCA-A----------------------CATTAATAAG-T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390764 103 +   1523678 T-ATCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TAT-ACCA---G--------CAAGTCAC-CT----GAGAAC-GCA--------GCAGCCA-A----------------------CATTAATAAG-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13685 105 +     22964 A-GTTAAGGTACC-----------AG-CAGT-AAGAA----TGC--TTT---TCC--CTTTGGTTAC-CAAA-CAGTGAG---C-AA----TT-TGT-AACA---G--------TAAGTCAC-CT----GAGAATAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 23 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2290 106 +      5583 A-ATCAGGTTACT-----------GA-CAAT-GAGAG----TCC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-TC----TT-TAT-AACA---G--------CAGGTCAT-CC----GAGAGCAGCA--------CCAGCCTTG----------------------CATGAATAAG-T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191207 105 +    199430 A-GTCAGGTCACC-----------AT-GAAC-AAGAA----TGC--TTT---TTC--CTTTGGTTAC-GAAA-CAATGAA---G-GA----TT-TAT-AACA---G--------CAGGTCAC-CC----GAGAACAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105177 105 -    539355 A-GTCAGGTCACC-----------AG-GAAC-AAGAA----TGC--TTT---TTC--CTTTGGTTAC-CAAA-CAATGAG---G-GA----TT-TAT-AACA---G--------CAGGTCAC-CC----GAGAACAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                  46 105 +      9917 A-ATCAGGTTGCT-----------GG-CAAC-AAGAG----CAC--TGC---TCC--CTTTGGGTAC-CAAA-CAATGAG---G-CA----TT-TAC-AACA---G--------CAGGTCAA-CT----GAGAACTGCA--------CTGGCCA-A----------------------CATTAACACA-T
i Tarsius_lariang.k141_1733899                           N 0 C 0
s Tarsius_wallacei.k141_226975                                6831 105 +     20590 A-ATCAGGTTGCT-----------GG-CAAC-AAGAG----CAC--TGC---TCC--CTTTGGGTGC-CAAA-CAATGAG---G-CA----TT-TAC-AACA---G--------CAGGTCAA-CT----GAGAACTGCA--------CTGGCCA-A----------------------CATTAACACA-T
i Tarsius_wallacei.k141_226975                           I 306 C 0
s Theropithecus_gelada.CM009954.1                           352709 108 - 186847797 a-acCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CGAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------C--ATTAATTATTAAG-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19385 109 -     31044 G-ATCAGGTTACT-----------GA-CAAT-AGGAG----AGC--TGT---TTC--CTCTGGTTGC-CAGA-CAAGGAG---G-CA----TT-CAT-GACA---G--------CAGGTCACCAGAGAGCAGAGCAGTG--------CCAGCCA-G----------------------C-CTCGGACC-C
i Tolypeutes_matacus.TolMat_scaffold_31955               I 11 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479742  61 -    610378 A-ATCAGGTTATC-----------AG-CACT-AAGAA----TGC--TTT---TCC--CTTTGGTTTC-CAAA-CAATGAG---G-CA----CT-TA--A-------------------------------------------------------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 I 19 I 36
s Trachypithecus_auratus.k141_1189070                        20371 104 +     26378 G-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33049 104 -     78344 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19696 104 +     25722 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28001 104 -     62838 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           28047 104 +     46913 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-C
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8854 104 -     28527 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      29938 104 -     64340 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          27975 104 -     63452 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9420 104 +     22490 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2846 104 -      6147 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9751 104 -     13050 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             254991 104 -   6242583 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1015 104 +     19340 A-ACCAGGTTACT-----------GG-CAAT-AA-AA----TGC--TGT---TCC--CTTTGGTTAC-CAGA-CAATGAG---G-CA----TT-TCT-ACCA---G--------CAAGTCAC-CT----GAGAACTGCA--------GCAGCCC-A----------------------CATTAATAAG-C
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173053 105 -    200418 C-ATCAGATTATC-----------AG-CTGT-AAGAA----TAT--TTT---TCC--GTTTGGTTAC-CAAA-CAACAAA---G-CT----TT-TGT-AATA---A--------CAGGTCAG-CC----TAGAACTGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480017 104 -  10818551 A-ATCAAGTCACT-----------GG-CAAT-A-GAG----TGC--TGT---T--CCCTTTGGTTAC-CAAA-CAATGAG---G-CT----TT-TAG-AACA---T--------CAGCTTAT-GC----AAGAGCAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833724 105 -   4065304 A-ATCAGGTTACT-----------GG-CAAT-AACAG----TGC--TAT---TCC--CTTCGCTTAC-CAAA-CAACAAG---G-CA----TT-TAT-AACA---G--------CAGGTCGC-CC----GGGACCAGCC--------CCAGCCA-A----------------------CATTAATAAG-C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7744 105 -     70247 A-ATCAGGTTACT-----------GG-CAAT-AACAA----TGC--TGT---TCC--CTTCGGTTAC-CAAA-CAACGAG---G-CA----TT-TAT-AACA---G--------CAGGTCGC-CC----GGGACCAGCC--------CCAGCCA-A----------------------CATTAATAAG-C
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361261 105 -  33153633 A-ATCAGGTTATC-----------AG-CTAT-AAGAA----TGC--TTT---TCC--CTTTGGTTAC-CAAA-CAGTGAG---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----GAGAACAGCA--------TAAGCCA-A----------------------CATTAATAAG-T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3249 104 -     21056 T-ACCAGATTATC-----------AG-TGAT-AACAC----TGC--TTT---TCC--CCTTGGTTAC-CAAA-CAAAGAT---G-CA----TT-TAT-AATA---G--------CAGGTCAT-GG----G-GACCAACA--------TCAGCCA-A----------------------TATTAATAAG-T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181414 105 +   5085361 a-atcaGGATATC-----------GG-CAAT-AAGaa----tgt--ttt---ttc--ctttggtttc-caaA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CC----GAGAACAGCA--------TCAGCCA-A----------------------CATTAATAAG-T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24825 105 -     30710 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TAT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23732 105 -    147434 A-ATCAGGTTACT-----------GG-CAAC-GAGAG----TGC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-TC----AAGAACAGCA--------CCAGCCA-A----------------------CATTAATAAG-T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   75896 104 +   5488506 A-ATCAGGTTATC-----------AG-CTAT-aagaa----tgt--ttt---tcc--ttttggttaC-CA-A-CAATGAG---G-CA----TT-TTT-AACA---G--------CAGGTCAG-CC----GAGAACAGCA--------GTAGCCA-A----------------------CATTAGTAAG-T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104551 106 -    112863 A-ATCAGGTTATC-----------AG-CAGT-AAGAC----TGC-TTTT---TTC--CTTTAGTCCC-CAAA-CAATGAG---G-CA----TT-TAT-AAAA---G--------CAGGTCAC-CT----GAGTACAGCA--------TTAGCCA-A----------------------CATTAATAAG-T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173755  57 -    224448 A-ATCAAGTTGCA-----------GG-CAAT-AAGCA----TGC--TGT---TCC--CTTTGGTTAC-CAAA-CAACGAG---G-CA----T--------------------------------------------------------------------------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 28
s Zalophus_californianus.ZalCal_flattened_line_17732         28447 105 -     86975 C-ATCAGGTTATC-----------GG-CAAT-AAGAA----TGC--TTT---TTC--CTTTGGTTCC-CAAA-CAATGAG---G-CA----TT-TAT-AACA---G--------CAGGTCAC-CG----GAGAACAGCC--------TCAGCCA-A----------------------CATTAATAAA-T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                       218 105 -       833 A-ATCAGGTTACA-----------GG-CAAT-AAGAG----TGC--TGT---TCC--CTTTGGTTAC-CAAA-CAATGAA---G-CA----CT-TAT-AACA---G--------CAGGTCAC-CT----GAGAACATCT--------CCAGCCA-A----------------------CATTAATAAA-T
i Zapus_hudsonius.ZapHud_scaffold_501999                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             669 104 +      1812 A-ATCAGCTTATC-----------AG-CTAT-AAGAA----TGT--TTT---TCC--CTTTGGTTAC-CAAA-CAGTGAG---G-CT----TT-TAT-AATA---G--------CAGGTCAG-CC----GAGAACAGCA---------AAGCCA-A----------------------CATTAATAAG-T
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589   0 -  31847680 C
e Ochotona_princeps.JH802162.1                             2550710 5994 -   3988456 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5155 5 +     36723 T-G-AA-A
s Acinonyx_jubatus.LLWD01001279.1                           812549 5 +   1699592 T-G-AA-A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24800 5 +     63021 T-A-AA-A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415005 5 +  29979442 T-G-AA-A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215317 5 +    347723 T-G-AA-A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17766 5 -     61208 T-A-AA-A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47476 5 +     53615 T-G-AA-A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43454 5 +     44087 T-G-AA-A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16062 5 -     21945 T-G-AA-A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17745 5 +     32033 T-G-AA-A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71909 5 -     84148 T-A-AA-A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44148 5 -     78289 T-A-AA-A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43587 5 +     55831 T-A-AA-A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42037 5 -     64179 T-A-AA-A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23671 5 -     24835 T-A-AA-A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40662 5 +     45454 T-A-AA-A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46311 5 +     70886 T-A-AA-A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8484 5 +     30854 T-A-AA-A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32618 5 +     42133 T-A-AA-A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584992 5 +   2318259 T-A-AA-G
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176801 5 -    412891 T-A--ATA
i Anoura_caudifer.AnoCau_scaffold_1412                   I 36 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50106 5 -     68529 A-A-AA-G
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     860 5 +     17741 T-A-AA-A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1485 5 -     15923 T-A-AA-A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671767 5 +   5030052 T-A-AA-A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               1760 5 -     16391 T-A-AA-A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1320 5 -     17186 T-A-AA-A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15681 3 -     32367 ----AA-A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19223 5 -     45910 T-A-CT-T
i Arctocebus_calabarensis.k141_1364444                   I 9 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5073 5 -     15198 TGA--A-A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 36 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274368 5 +  21539123 T-A-AA-A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10535 5 +     48076 T-A-AA-A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5672 5 -     28759 T-A-AA-A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33225 5 +     44353 T-A-AA-A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48595 5 -     71267 T-A-AA-A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22654 5 -     33135 T-A-AA-A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5896 5 +     11645 T-A-AA-A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5904 5 -     19611 T-A-AA-A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956894 5 -  23207421 T-A-AA-A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         4103 5 -      4711 T-A-AA-A
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86001 5 +    124022 T-A-AA-G
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21533 5 +    288883 T-A-AA-G
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355919 5 +  48749331 T-A-AA-G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754487 5 +   1948126 T-A-AA-G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544626 5 -  45695690 T-A-AA-G
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529651 5 -   4408762 T-A-AA-G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7541 5 +     28062 T-A-AA-A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42835 5 -     91139 T-A-AA-A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20361 5 +     95584 T-A-AA-A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20274 5 +    119600 T-A-AA-A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9841 5 +     18648 T-A-AA-A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9378 2 -     13885 -----A-A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1446 5 -      8861 T-A-AA-A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453839 5 + 189096842 T-A-AA-A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1361 5 +      8664 T-A-AA-A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630666 5 +  17673402 T-A-AA-A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664952 5 +   7040546 T-A-AA-A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208612 5 +   1652518 T-A-AA-A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505026 5 +  60362399 T-G-AA-A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8662 5 -     23171 T-G-AA-A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222005 5 +   9314153 T-G-AA-A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615140 5 +  59632846 T-G-AA-A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106721 5 -  63665305 T-G-AA-A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408722 5 -  46296322 T-A-AA-G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26590995 5 +  44709034 T-A-AA-G
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1218 5 -      1880 T-A-AA-A
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269926 5 +    496798 T-A-AA-A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_1091333               271 4 +       553 T-A--A-A
i Carollia_perspicillata.CarPer_scaffold_1091333         I 36 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27344 5 -     39886 T-A-AA-A
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79208 5 -    217609 T-A-AA-A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996074 5 +  23392119 T-A-AA-A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999516 5 +  23407841 T-A-AA-A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62597 5 -     66877 T-A-AA-A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4759 5 -     12580 T-A-AA-A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42817 5 +     53515 T-A-AA-A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370748 5 -  26074798 T-A-AA-A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7637 5 -     34880 T-A-AA-A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66732 5 -     89041 T-A-AA-A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1887 5 -      5494 T-A-AA-A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491838 5 -  27778364 T-A-AA-A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18671 5 +     27315 T-A-AA-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140649 5 -   4669795 T-G-AA-A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44391 5 +     47900 T-G-AA-A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44215 5 -     44860 T-G-AA-A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44204 5 -    148725 T-G-AA-A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26391 5 -     40656 T-G-AA-A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6357 5 +     20796 T-G-AA-A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11474 5 -     17524 T-G-AA-A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27196 5 -     34525 T-G-AA-A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10977 5 -     25376 T-G-AA-A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363573 5 -  39242232 T-G-AA-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269289 5 +  21565898 T-G-AA-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31663 5 -     45857 T-G-AA-A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26562 5 -     32606 T-G-AA-A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2721 5 +      8499 T-G-AA-A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25118 5 +     70610 T-G-AA-A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22088 5 +     36323 T-G-AA-A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12406 5 -     19938 C-T-AA-A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 31 C 0
s Cheirogaleus_major.k141_666340                             30272 5 -     33796 T-A-AA-A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4789 5 -     15404 T-A-AA-A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8635 5 -     32913 G-A-AA-G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19048 5 -     40346 G-A-AA-G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19303 5 +    216457 G-A-AA-G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19096 5 +     39636 G-A-AA-G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238441 5 -   2543920 T-A-AA-A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3690 5 +      5346 T-A-AA-A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42172 5 -    112038 T-A-AA-A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7743 5 +     34062 T-A-AA-A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342979 5 +  18827391 T-G-AA-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9526 5 -     44032 T-G-AA-A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304303 5 - 135778131 T-G-AA-A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14444 5 +     15858 C-A-AA-A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606020 5 -    839153 C-A-AA-A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                441 5 +      2406 T-A-AA-A
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             408728 5 -   2368649 T-G-AA-A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378604 5 - 200372422 T-G-AA-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2153 5 -     84244 T-G-AA-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806922 5 +  53390261 T-A-AA-A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2436 5 -      8242 T-G-AA-A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43937 5 -     83289 T-A-AA-A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114506 5 - 224834208 T-A-AA-A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               8967 5 +     12657 T-A-AA-A
i Crocidura_indochinensis.CroInd_scaffold_77846          I 1877 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              3996 5 +     87169 T-G-AA-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644654 5 -   1526836 T-A-AA-G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18018 5 +     50838 T-A-AA-A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3987 5 +     36344 T-A-AA-A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27763 5 +     75252 T-A-AA-A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109774 6 -   2246927 C-AAAA-G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292207 5 +  12879189 T-A-AA-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625426 5 -  35494412 T-A-AA-A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330113 5 -   2620052 T-A-AA-C
i Desmodus_rotundus.KZ672366.1                           I 36 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664123 5 -   1390856 T-A-AA-A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138915 5 -    198055 T-A-AA-A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98528 5 -    115145 T-A-AA-A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950124 5 -  37912305 T-A-AA-A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5062 5 -     10735 T-A-AA-A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10023 5 +     14636 T-A-AA-A
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5899 5 +     19438 T-A-AA-A
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239365 5 -    607251 T-A-AA-G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108374 5 -  10337057 T-A-AA-A
i Elephantulus_edwardii.JH947257.1                       I 10 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30654 5 +    110024 T-A-AA-A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12625 5 +     18970 T-A-AA-A
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915747 5 +  41312741 T-G-AA-A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578547 5 +  14770903 T-A-AA-A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041000 5 -   4378816 T-A-AA-A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374938 5 +  39960074 T-A-AA-A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             319 5 -      1194 T-A-AA-A
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665706 5 +   7059049 T-A-AA-A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262506 5 +  21539334 T-G-AA-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64766 5 -    133382 T-A-AA-A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4985 5 +      7672 T-A-AA-A
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14415 5 -     24895 T-A-AA-A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42124 5 -     70999 T-A-AA-A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86086 5 +    112731 T-A-AA-A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42655 5 +     68309 T-A-AA-A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52981 5 -     65740 T-A-AA-A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23610 5 -     75513 T-A-AA-A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47808 5 -     97555 T-A-AA-A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4532 5 +     30972 T-A-AA-A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42252 5 -     52037 T-A-AA-A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58654 5 -    111500 T-A-AA-A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246458 5 - 206538554 T-G-AA-A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116244 5 - 205367284 T-G-AA-A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27341 5 -     30238 T-G-AA-A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916063 5 -   3816255 T-A-AA-A
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     124652 5 -    137831 T-A-AT-T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8197 5 +     22493 T-A-AT-T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20274 5 -     32986 T-A-AT-T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 807 5 -     28519 T-A-CA-A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91069 5 -     95226 T-A-AA-G
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34138 3 -     36801 ----AA-A
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5455 5 -      8343 T-G-AA-A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254469 5 - 186649187 T-G-AA-A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1631 3 -     78134 ----AA-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14340 5 -     40692 T-A-AA-A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35742 5 +     49394 T-A-AA-A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60610 5 -     66874 T-A-AA-A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9484 5 -     42923 T-A-AA-A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16484 5 -     53142 T-A-AA-A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30426 5 -    327341 T-C-AA-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8751 5 +     48891 T-A-AA-G
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932030 5 -  22651954 T-A-AA-A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_870725                 142 5 -       322 T-G-AA-A
i Heterohyrax_brucei.HetBruBak_scaffold_870725           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7271 5 -     36432 T-A-AA-A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553776 5 -   1711038 t-a-aa-a
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 21
s Hipposideros_galeritus.HipGal_scaffold_164997                691 5 -      2730 T-A-AA-A
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 31
s Hoolock_leuconedys.ctg274                                    142478 5 -    630532 T-G-AA-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69338 5 +     83186 T-G-AA-A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71503 5 +    143317 T-A-AA-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5513 5 +     12352 C-G-AA-A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12697 5 +     55766 T-G-AA-A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052295 5 + 191637585 T-G-AA-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801173 5 +  11177569 T-G-AA-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4127 5 -    135385 T-A-AA-A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386471 3 +   7955117 ----AC-A
i Ictidomys_tridecemlineatus.JH393364.1                  I 28 C 0
s Indri_indri.k141_2415743                                    2044 5 +     11955 T-A-AA-A
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                3243 5 -     16823 T-A-AA-A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1239471 5 +   9596543 T-A-AA-G
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65485 5 -     97402 T-A-AA-A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42912 5 +    110728 T-A-AA-C
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62542 5 -     65777 T-A-AA-A
i Lasiurus_borealis.LasBor_scaffold_16567                I 31 C 0
s Lemur_catta.scaffold_24                                 14759133 5 +  30322482 T-A-AA-A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3825 5 -     13097 T-A-AA-A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3579 5 +      5940 T-A-AA-A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3409 5 -      5717 T-A-AA-A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9785 5 -     11567 T-A-AA-A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11166 5 -     12945 T-A-AA-A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8648 5 +     29618 T-A-AA-A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8644 5 +     31569 T-A-AA-A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8654 5 +     24756 T-A-AA-A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8654 5 +     16388 T-A-AA-A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813158 5 -   3914936 T-G-AA-A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17514 3 +     24238 ----AA-A
i Lepus_americanus.LepAme_scaffold_56121                 I 5 C 0
s Lipotes_vexillifer.KE559953.1                             334771 5 +    662738 T-A-AA-A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333534 5 -   1826925 T-G-AA-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10231 5 +     19643 T-A-AT-T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043894 5 -   6120653 T-A-AT-T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080661 4 +  43346337 T-A-A--A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614295 5 +  59628241 T-G-AA-A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44928 5 -     61512 T-G-AA-A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372590 5 -  60120075 T-G-AA-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24853 5 +     30207 T-G-AA-A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21956 5 -     24934 T-G-AA-A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24806 5 +     30527 T-G-AA-A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35982 5 -     50087 T-G-AA-A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45726 5 +     51645 C-G-AA-A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414928 5 - 187317192 T-G-AA-A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399159 5 +  25927173 T-G-AA-A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48331 5 -     62418 T-G-AA-A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  869 5 +     14901 T-G-AA-A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44803 5 +     59329 T-G-AA-A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270711 5 +    668171 T-G-AA-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  987 5 +      1732 T-G-AA-A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2509 5 +     17132 T-G-AA-A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222850 5 -    270270 T-A-CA-G
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        321998 5 +  24302211 T-G-AA-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356829 5 -    752769 T-G-AA-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673206 3 -    737560 ----AA-A
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                             220494 3 +    317179 ----AA-A
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Marmota_marmota.CZRN01000018.1                           7500691 3 +  40650429 ----AC-A
i Marmota_marmota.CZRN01000018.1                         I 28 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150041 5 +    207569 T-A-AA-A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25847 5 -     74585 G-G-AA-A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49791 5 -    140813 T-A-AA-A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428890 5 +  29670104 T-C-AA-A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     81070 5 +     93471 T-A-AG-A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9950 5 +     17804 T-A-AA-A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10452 5 -     12984 T-A-AA-A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18766 5 -     26561 T-A-AA-A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984256 5 +  93316391 T-A-AA-A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45796 5 +    145209 T-A-CA-A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184767 3 +    200668 T-A-A---
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 36 C 0
s Microtus_ochrogaster.CM001695.1                         15962091 5 +  27267610 T-A-AA-A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362898 5 -   8254450 T-A-AA-A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41805 5 -     48117 T-A-AA-A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22015 5 -     27822 T-G-AA-A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8165 5 +     27589 T-G-AA-A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52052 5 -     62432 T-A-AA-A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   353169 5 +    437263 T-A-AA-A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178948 5 +    366855 T-A-AA-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 36 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25187 5 -     82753 T-A-AA-G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18177 5 -     63510 T-C-AA-A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38865 5 +     47283 T-A-AA-A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592821 5 + 120012414 T-A-AA-A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687206 5 + 129401213 T-A-AA-A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39496502 5 + 130317789 T-A-AA-A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82967 3 -     86153 ----AA-A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354780 5 +  14710649 T-G-AG-A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     62799 5 +     67721 T-A-AA-A
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793151 5 +  10118263 T-A-AA-A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387281 5 +   6019432 T-A-AA-A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383108 5 +   4330536 T-A-AA-A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1917 5 +     18357 T-A-AA-A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119406 5 +    130748 T-A-AA-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945950 5 +   3037898 T-G-AA-A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28653 5 +     34575 T-G-AA-A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1227339 5 -   7148211 T-A-AA-A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127885 5 -    149072 G-A-AA-A
i Noctilio_leporinus.NocLep_scaffold_7894                I 36 C 0
s Nomascus_annamensis.k141_1771965                           53406 5 -    132029 T-G-AA-A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9501 5 -     16345 T-G-AA-A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15386 5 +     22201 T-G-AA-A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413607 5 -  22158432 T-G-AA-A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25784 5 -     54323 T-G-AA-A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197889 5 +   9404916 T-G-AA-A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636253 5 + 196305487 T-A-AT-T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3007 5 -      3937 T-A-AT-T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564512 5 - 199412804 T-A-AT-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11054751 5 -  11899542 T-A-AA-A
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451357 5 +   2017862 T-G-AA-A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435955 5 -    630418 T-A-AA-G
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13952 5 +    150152 T-A-AA-G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92447 5 -    140218 T-A-AA-A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3328 5 -     41509 T-A-AA-A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096621 5 +  10937097 T-A-AA-A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13504 5 -     14239 C-A-AA-A
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103306 3 - 174332312 ----AA-A
i Oryctolagus_cuniculus.CM000791.1                       I 5 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38935 5 +    559221 T-G-AA-A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39813 5 -     51505 T-A-AT-T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352816 5 +   1103335 T-A-AT-T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403872 5 -  44047080 T-A-AA-G
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4391 5 +     17875 T-A-AA-G
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472498 5 - 189151597 T-G-AA-A
i Pan_troglodytes.CM009242.2                             I 311 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24164 5 -    230217 T-G-AA-A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461490 5 -  18783137 T-G-AA-A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972149 5 +   8748460 T-G-AA-A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615387 5 +   2937107 T-A-AA-G
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242831 5 - 183742232 T-G-AA-A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9293 5 +     21308 T-G-AA-A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291867 5 -  20919399 T-G-AA-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21941 5 -     27687 T-G-AA-A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15087 5 +     16796 T-G-AA-A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21898 5 -     23640 T-G-AA-A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14757 5 +     78924 T-G-AA-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26015 5 +     31479 T-A-CT-T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18384 5 -     24908 T-A-CT-T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1460 5 +      9367 T-A-AA-A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246526 5 +  18517816 T-A-AA-A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31633 5 -     56120 T-A-AA-A
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12465 5 -     15039 T-A-AA-A
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2111 5 +     55023 T-G-AA-G
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1661 5 -     89929 T-G-AA-G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2250 5 +     40849 T-G-AA-G
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253914 5 +  14605196 T-G-AA-G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3454 5 +     22231 T-A-AA-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64540 5 +    207309 T-A-AA-A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5634 5 -     25401 T-A-AA-A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31376 5 +     58159 T-A-AA-A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31652 5 +     63561 T-A-AA-A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31412 5 +     51148 T-A-AA-A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556383 5 -   4542175 T-A-AA-A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31396 5 +     51125 T-A-AA-A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4555 5 -      8168 T-A-AA-A
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7803 5 +     39866 G-A-AA-G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2887 5 -      9282 G-A-AA-G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42291 5 -     87950 G-A-AA-G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42685 5 -     88961 G-A-AA-G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7383 5 -     39403 G-A-AA-G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42334 5 +     87928 G-A-AA-G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7380 5 -     60166 G-A-AA-G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14317 5 -     67232 G-A-AA-G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42233 5 -     90634 G-A-AA-G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43700 5 +     89403 G-A-AA-G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177622 5 - 189387572 T-G-AA-A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192439 5 -   9816681 T-G-AA-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              27236 5 +     69807 T-G-AA-A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44422 5 -     80239 T-G-AA-A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982288 5 +   4620579 T-A-AA-A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565793 5 -   2598838 T-A-AA-A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3431 5 -      7103 T-A-AA-A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4028 5 -     11706 T-A-AA-A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7766 5 -     30655 T-A-AA-A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34079 5 +     46564 T-A-AA-A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94358 5 -     98465 T-A-AA-A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7997 5 +     35169 T-A-AA-A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37133 5 +     52041 T-A-AA-A
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51846 5 -     66298 T-A-AA-A
i Pteronotus_parnellii.KE847780.1                        I 33 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4350 5 -     18639 T-G-AA-A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840538 5 -  28871421 T-A-AA-A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537057 5 -   4952924 T-A-AA-A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098807 5 +  38429054 T-G-AA-A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26610 5 +     91421 T-G-AA-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153102 5 -   7812017 T-G-AA-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7477 5 +     72585 T-G-AA-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52874 5 +     55069 T-A-AA-G
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022428 5 -  90668790 T-A-AA-A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914429 5 +   3329780 T-A-AA-A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             1187 5 +      7119 T-G-AA-A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121795 5 + 195417433 T-G-AA-A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236037 5 -   7961872 T-G-AA-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74468 5 -    116970 T-A-AA-G
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3688 5 +     27962 T-A-AA-A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3583 5 +      6077 T-A-AA-A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3673 5 +      5971 T-A-AA-A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3594 5 +      5932 T-A-AA-A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1936 5 -      4390 T-A-AA-A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391373 5 - 209938924 T-G-AA-A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3543 5 +      5979 T-A-AA-A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                112 5 -     22275 T-A-AA-A
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7545 5 +     16473 T-A-AA-G
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108710 5 + 121099817 T-A-AA-A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30277 5 -     47369 T-A-AA-A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30663 5 -     79414 T-A-AA-A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27354 5 -     34454 T-A-AA-A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14757 5 -     22428 T-A-AA-A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29909 5 -     47109 T-A-AA-A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237966 5 +   5703754 C-A-AA-A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7556 5 +     21866 C-A-AA-A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115612 5 +    313613 A-A-AA-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24929 5 +     27374 T-A-AA-A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28443 5 +     58920 T-A-AA-A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14939 5 -     45317 T-A-AA-A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22598 5 -     42441 T-A-AA-A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25276 5 -     29113 T-A-AA-A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28350 5 -     48123 T-A-AA-A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48909 5 +     77746 T-A-AA-A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857959 4 -   1910179 --A-AA-A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671043 3 +  18376816 ----AA-A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868050 3 +   3870691 ----AC-A
i Spermophilus_dauricus.KZ294078.1                       I 28 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6418 5 -     97271 T-G-AA-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124580 5 +    196729 T-C-AA-A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643471 5 +  69701581 T-A-AA-A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390867 5 +   1523678 T-G-AA-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13790 5 +     22964 T-A-AA-A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2396 5 +      5583 T-A-AA-A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191312 5 +    199430 T-A-AA-A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105282 5 -    539355 T-A-AA-A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 151 5 +      9917 T-A-AA-A
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6936 5 +     20590 T-A-AA-A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352817 5 - 186847797 T-G-AA-A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19494 5 -     31044 T-T-AA-A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479839 5 -    610378 T-A-AA-A
i Tonatia_saurophila.TonSau_scaffold_294                 I 36 C 0
s Trachypithecus_auratus.k141_1189070                        20475 5 +     26378 T-G-AA-A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33153 5 -     78344 T-G-AA-A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19800 5 +     25722 T-G-AA-A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28105 5 -     62838 T-G-AA-A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           28151 5 +     46913 T-G-AG-A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8958 5 -     28527 T-G-AA-A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30042 5 -     64340 T-G-AA-A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28079 5 -     63452 T-G-AA-A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9524 5 +     22490 T-G-AA-A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2950 5 -      6147 T-G-AA-A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9855 5 -     13050 T-G-AA-A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255095 5 -   6242583 T-G-AA-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1119 5 +     19340 T-G-AG-A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173158 5 -    200418 T-A-AA-G
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480121 5 -  10818551 T-C-AA-A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833829 5 -   4065304 T-G-AA-A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7849 5 -     70247 T-G-AA-A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361366 5 -  33153633 T-A-AA-A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3353 5 -     21056 G-A-AA-A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181519 5 +   5085361 T-G-AA-A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24930 5 -     30710 T-A-AA-A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23837 5 -    147434 T-A-AA-A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76000 5 +   5488506 T-A-CA-G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104657 5 -    112863 T-G-AA-A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173840 3 -    224448 ----AC-A
i Xerus_inauris.XerIna_scaffold_2302                     I 28 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28552 5 -     86975 T-G-AA-A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                       323 5 -       833 T-A-AA-A
i Zapus_hudsonius.ZapHud_scaffold_501999                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             773 5 +      1812 T-A-AA-A
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Echinops_telfairi.JH980293.1                            62854739 0 - 111700974 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Ochotona_princeps.JH802162.1                             2550710 5994 -   3988456 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5160 4 +     36723 GTAC
s Acinonyx_jubatus.LLWD01001279.1                           812554 4 +   1699592 GTAC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24805 4 +     63021 GTAC
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415010 4 +  29979442 GTAC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215322 4 +    347723 GTAC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17771 4 -     61208 GCAC
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47481 4 +     53615 GTAC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43459 4 +     44087 GTAC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16067 4 -     21945 GTGC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17750 4 +     32033 GTAC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71914 4 -     84148 GTAC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44153 4 -     78289 GTAC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43592 4 +     55831 GTAC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42042 4 -     64179 GTAC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23676 4 -     24835 GTAC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40667 4 +     45454 GTAC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46316 4 +     70886 GTAC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8489 4 +     30854 GTAC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32623 4 +     42133 GTAC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1584997 4 +   2318259 GCAC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176806 4 -    412891 GTAG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50111 4 -     68529 GCAC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     865 4 +     17741 GTAC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1490 4 -     15923 GTAC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671772 4 +   5030052 GTAC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               1765 4 -     16391 GTAC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1325 4 -     17186 GTAC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15684 4 -     32367 GTAC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19228 4 -     45910 GTGC
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5078 4 -     15198 GTCG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274373 4 +  21539123 GTAC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10540 4 +     48076 GTAC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5677 4 -     28759 GTAC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33230 4 +     44353 GTAC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48600 4 -     71267 GTAC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22659 4 -     33135 GTAC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5901 4 +     11645 GCAC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5909 4 -     19611 GCAC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956899 4 -  23207421 GTAC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         4108 4 -      4711 GTAC
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86006 4 +    124022 GCAC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21538 4 +    288883 GCAC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355924 4 +  48749331 GCAC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754492 4 +   1948126 GCAC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544631 4 -  45695690 GCAC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529656 4 -   4408762 GCAC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7546 4 +     28062 GTGC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42840 4 -     91139 GTGC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20366 4 +     95584 GTGC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20279 4 +    119600 GTGC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9846 4 +     18648 GTAC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9380 4 -     13885 GTAC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1451 4 -      8861 GTAC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453844 4 + 189096842 GTAC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1366 4 +      8664 GTAC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630671 4 +  17673402 GTAC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664957 4 +   7040546 GTAC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208617 4 +   1652518 GTAC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505031 4 +  60362399 GTAC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8667 4 -     23171 GTAC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222010 4 +   9314153 GTAC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615145 4 +  59632846 GTAC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106726 4 -  63665305 GTAC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408727 4 -  46296322 GCAC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591000 4 +  44709034 GCAC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1223 4 -      1880 GTAC
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269931 4 +    496798 GTAC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_1091333               275 4 +       553 GTAG
i Carollia_perspicillata.CarPer_scaffold_1091333         C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27349 4 -     39886 GTGC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79213 4 -    217609 GTAC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996079 4 +  23392119 GTAT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999521 4 +  23407841 GTAT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62602 4 -     66877 GTAT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4764 4 -     12580 GTAC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42822 4 +     53515 GTAC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370753 4 -  26074798 GTAC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7642 4 -     34880 GTAC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66737 4 -     89041 GTAC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1892 4 -      5494 GTAC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491843 4 -  27778364 GTAC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18676 4 +     27315 GTAC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140654 4 -   4669795 GTAC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44396 4 +     47900 GTAC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44220 4 -     44860 GTAC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44209 4 -    148725 GTAC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26396 4 -     40656 GTAC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6362 4 +     20796 GTAC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11479 4 -     17524 GTAC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27201 4 -     34525 GTAC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10982 4 -     25376 GTAC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363578 4 -  39242232 GTAC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269294 4 +  21565898 GTAC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31668 4 -     45857 GTAC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26567 4 -     32606 GTAC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2726 4 +      8499 GTAC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25123 4 +     70610 GTAC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22093 4 +     36323 GTAC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12411 4 -     19938 GGGC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30277 4 -     33796 GCAC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4794 4 -     15404 GCAC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8640 4 -     32913 GCAC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19053 4 -     40346 GCAC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19308 4 +    216457 GCAC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19101 4 +     39636 GCAC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238446 4 -   2543920 GTAC
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3695 4 +      5346 GTAC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42177 4 -    112038 GTGC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7748 4 +     34062 GTGC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342984 4 +  18827391 GTAC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9531 4 -     44032 GTAC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304308 4 - 135778131 GTAC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14449 4 +     15858 GTAC
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606025 4 -    839153 GTAC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                446 4 +      2406 GTAC
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             408733 4 -   2368649 GTAC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378609 4 - 200372422 GTAC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2158 4 -     84244 GTAC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806927 4 +  53390261 GTAC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2441 4 -      8242 GTTC
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43942 4 -     83289 GCAC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114511 4 - 224834208 GTAC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               8972 4 +     12657 GTAC
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4001 4 +     87169 GTAC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644659 4 -   1526836 GAAC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18023 4 +     50838 GTGC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3992 4 +     36344 GTAT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27768 4 +     75252 GTAT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109780 4 -   2246927 GGAC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292212 4 +  12879189 GTAC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625431 4 -  35494412 GTAC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330118 4 -   2620052 GTGG
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664128 4 -   1390856 GTAC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138920 4 -    198055 GTAC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98533 4 -    115145 GCAC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950129 4 -  37912305 GTAC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5067 4 -     10735 GTAC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10028 4 +     14636 GTAT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5904 4 +     19438 GTAC
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239370 4 -    607251 GCAC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108379 4 -  10337057 GTAC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30659 4 +    110024 GTAC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12630 4 +     18970 GTAC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915752 4 +  41312741 GTAC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578552 4 +  14770903 GTAC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041005 4 -   4378816 GGAC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374943 4 +  39960074 GGAC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             324 4 -      1194 GGAC
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665711 4 +   7059049 GTAT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262511 4 +  21539334 GTAC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64771 4 -    133382 GTAC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4990 4 +      7672 GTAC
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14420 4 -     24895 GCAC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42129 4 -     70999 GCAC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86091 4 +    112731 GCAC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42660 4 +     68309 GCAC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52986 4 -     65740 GCAC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23615 4 -     75513 GCAC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47813 4 -     97555 GCAC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4537 4 +     30972 GCAC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42257 4 -     52037 GCAC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58659 4 -    111500 GCAC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246463 4 - 206538554 GTAC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116249 4 - 205367284 GTAC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27346 4 -     30238 GTAC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916068 4 -   3816255 GTAC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     124657 4 -    137831 GTGC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8202 4 +     22493 GTGC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20279 4 -     32986 GTGC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 812 4 -     28519 GGAC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91074 4 -     95226 GCAG
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34141 4 -     36801 GTAC
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5460 4 -      8343 GTAC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254474 4 - 186649187 GTAC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1634 4 -     78134 GTAC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14345 4 -     40692 GCAC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35747 4 +     49394 GCAC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60615 4 -     66874 GCAC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9489 4 -     42923 GCAC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16489 4 -     53142 GCAC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30431 4 -    327341 GTAC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8756 4 +     48891 GCAC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932035 4 -  22651954 GTAC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_870725                 147 4 -       322 GTAG
i Heterohyrax_brucei.HetBruBak_scaffold_870725           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7276 4 -     36432 GTAC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553802 4 -   1711038 gttC
i Hipposideros_armiger.JXIK01000431.1                    I 21 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                727 4 -      2730 GTTC
i Hipposideros_galeritus.HipGal_scaffold_164997          I 31 C 0
s Hoolock_leuconedys.ctg274                                    142483 4 -    630532 GTAC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69343 4 +     83186 GTAC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71508 4 +    143317 GTAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5518 4 +     12352 GTAC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12702 4 +     55766 GTAC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052300 4 + 191637585 GTAC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801178 4 +  11177569 GTAC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4132 4 -    135385 GTAC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386474 4 +   7955117 GTTC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2049 4 +     11955 GCAT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                3248 4 -     16823 GTAC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1239476 4 +   9596543 GCAC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65490 4 -     97402 GTAC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42917 4 +    110728 GTAC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62547 4 -     65777 GTAC
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 7
s Lemur_catta.scaffold_24                                 14759138 4 +  30322482 GCAC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3830 4 -     13097 GTAC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3584 4 +      5940 GTAC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3414 4 -      5717 GTAC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9790 4 -     11567 GTAC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11171 4 -     12945 GTAC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8653 4 +     29618 GCAC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8649 4 +     31569 GCAC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8659 4 +     24756 GCAC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8659 4 +     16388 GCAC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813163 4 -   3914936 GTAC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17517 4 +     24238 GTAC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             334776 4 +    662738 GTAC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333539 4 -   1826925 GTAC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10236 4 +     19643 GTGC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043899 4 -   6120653 GTGC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080665 4 +  43346337 GGAC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614300 4 +  59628241 GTAC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44933 4 -     61512 GTAC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372595 4 -  60120075 GTAC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24858 4 +     30207 GTAC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21961 4 -     24934 GTAC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24811 4 +     30527 GTAC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35987 4 -     50087 GTAC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45731 4 +     51645 GTAC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414933 4 - 187317192 GTAC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399164 4 +  25927173 GTAC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48336 4 -     62418 GTAC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  874 4 +     14901 GTAC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44808 4 +     59329 GTAC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270716 4 +    668171 GTAC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  992 4 +      1732 GTAC
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2514 4 +     17132 GTAC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222855 4 -    270270 GTAC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322003 4 +  24302211 GTAC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356834 4 -    752769 GTAC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673209 4 -    737560 GTAC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220497 4 +    317179 GTAC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500694 4 +  40650429 GTTC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150046 4 +    207569 GTTT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25852 4 -     74585 GTAC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49796 4 -    140813 GTAC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428895 4 +  29670104 GTAC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     81075 4 +     93471 GTAC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9955 4 +     17804 GTAC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10457 4 -     12984 GTAC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18771 4 -     26561 GTAC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984261 4 +  93316391 GCAC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45801 4 +    145209 GTAC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962096 4 +  27267610 GTAC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362903 4 -   8254450 GTAC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41810 4 -     48117 GTAC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22020 4 -     27822 GTAC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8170 4 +     27589 GTAC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52057 4 -     62432 GCAC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   353174 4 +    437263 GTAC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178953 4 +    366855 GGAG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25192 4 -     82753 GCAC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18182 4 -     63510 GTAC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38870 4 +     47283 GTAC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592826 4 + 120012414 GTAC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687211 4 + 129401213 GTAC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39496507 4 + 130317789 GTAC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82970 4 -     86153 GTAC
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354785 4 +  14710649 GTAC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     62804 4 +     67721 GTAC
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793156 4 +  10118263 GTAc
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387286 4 +   6019432 GTAc
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383113 4 +   4330536 GTAC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1922 4 +     18357 GTAC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119411 4 +    130748 GTAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945955 4 +   3037898 GTGC
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28658 4 +     34575 GTAC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1227344 4 -   7148211 GTAC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127890 4 -    149072 GTAG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53411 4 -    132029 GTAC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9506 4 -     16345 GTAC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15391 4 +     22201 GTAC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413612 4 -  22158432 GTAC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25789 4 -     54323 GTAC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197894 4 +   9404916 GTAC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636258 4 + 196305487 GTGC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3012 4 -      3937 GTGC
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564517 4 - 199412804 GTGC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11054756 4 -  11899542 GTAC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451362 4 +   2017862 GTAC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435960 4 -    630418 GCAC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13957 4 +    150152 GCAG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92452 4 -    140218 GTAC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3333 4 -     41509 GTAC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096626 4 +  10937097 GTAC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13509 4 -     14239 GCAC
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103309 4 - 174332312 GTAC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38940 4 +    559221 GTAC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39818 4 -     51505 GTGC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352821 4 +   1103335 GTGC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403877 4 -  44047080 GCAC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4396 4 +     17875 GCAC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472503 4 - 189151597 GTAC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24169 4 -    230217 GTAC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461495 4 -  18783137 GTAC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972154 4 +   8748460 GTAC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615392 4 +   2937107 GCAC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242836 4 - 183742232 GTAC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9298 4 +     21308 GTAC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291872 4 -  20919399 GTAC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21946 4 -     27687 GTAC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15092 4 +     16796 GTAC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21903 4 -     23640 GTAC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14762 4 +     78924 GTAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26020 4 +     31479 GTGC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18389 4 -     24908 GTGC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1465 4 +      9367 GTAC
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246531 4 +  18517816 GTAC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31638 4 -     56120 GTAC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12470 4 -     15039 GTAC
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2116 4 +     55023 GTAC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1666 4 -     89929 GTAC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2255 4 +     40849 GTAC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253919 4 +  14605196 GTAC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3459 4 +     22231 GTAC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64545 4 +    207309 GTGC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5639 4 -     25401 GTGC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31381 4 +     58159 GTGC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31657 4 +     63561 GTGC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31417 4 +     51148 GTGC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556388 4 -   4542175 GTGC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31401 4 +     51125 GTGC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4560 4 -      8168 GTAC
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7808 4 +     39866 GCAC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2892 4 -      9282 GCAC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42296 4 -     87950 GCAC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42690 4 -     88961 GCAC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7388 4 -     39403 GCAC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42339 4 +     87928 GCAC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7385 4 -     60166 GCAC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14322 4 -     67232 GCAC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42238 4 -     90634 GCAC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43705 4 +     89403 GCAC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177627 4 - 189387572 GTAC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192444 4 -   9816681 GTAC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              27241 4 +     69807 CTAC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44427 4 -     80239 GTAC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982293 4 +   4620579 GCAC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565798 4 -   2598838 GCAC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3436 4 -      7103 GCAC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4033 4 -     11706 GCAC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7771 4 -     30655 GCAC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34084 4 +     46564 GCAC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94363 4 -     98465 GCAC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8002 4 +     35169 GCAC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37138 4 +     52041 GTAC
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51851 4 -     66298 GTGG
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4355 4 -     18639 GTAC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840543 4 -  28871421 GTAC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537062 4 -   4952924 GTAC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098812 4 +  38429054 GTAC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26615 4 +     91421 GTAC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153107 4 -   7812017 GTAC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7482 4 +     72585 GTAC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52879 4 +     55069 GCAC
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022433 4 -  90668790 GTAC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914434 4 +   3329780 GTTC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             1192 4 +      7119 GTAC
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121800 4 + 195417433 GTAC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236042 4 -   7961872 GTAC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74473 4 -    116970 GTAA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3693 4 +     27962 GTAC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3588 4 +      6077 GTGC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3678 4 +      5971 GTAC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3599 4 +      5932 GTAC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1941 4 -      4390 GTAC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391378 4 - 209938924 GTAC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3548 4 +      5979 GTAC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                117 4 -     22275 GTGC
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7550 4 +     16473 GCAC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108715 4 + 121099817 GGAC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30282 4 -     47369 GGAC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30668 4 -     79414 GGAC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27359 4 -     34454 GGAC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14762 4 -     22428 GGAC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29914 4 -     47109 GGAC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237971 4 +   5703754 GTAC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7561 4 +     21866 GTAC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115617 4 +    313613 TTAC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24934 4 +     27374 GTAC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28448 4 +     58920 GTAC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14944 4 -     45317 GTAC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22603 4 -     42441 GTAC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25281 4 -     29113 GTAC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28355 4 -     48123 GTAC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48914 4 +     77746 GTAC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857963 4 -   1910179 GTAC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671046 4 +  18376816 GTAC
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868053 4 +   3870691 GTTC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6423 4 -     97271 GTAC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124585 4 +    196729 GTAC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643476 4 +  69701581 GTAC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390872 4 +   1523678 GTAC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                13795 4 +     22964 GAAC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 233
s Tamandua_tetradactyla.TamTet_scaffold_224794                2401 4 +      5583 GTAC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191317 4 +    199430 GTAC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105287 4 -    539355 GTAC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 156 4 +      9917 GTAC
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                6941 4 +     20590 GTAC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352822 4 - 186847797 GTAC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19499 4 -     31044 GGGG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479844 4 -    610378 GTAG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20480 4 +     26378 GTAC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33158 4 -     78344 GTGC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19805 4 +     25722 GTAC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28110 4 -     62838 GTGC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           28156 4 +     46913 GTAC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8963 4 -     28527 GTGC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30047 4 -     64340 GTGC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28084 4 -     63452 GTGC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9529 4 +     22490 GTGC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2955 4 -      6147 GTGC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9860 4 -     13050 GTGC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255100 4 -   6242583 GTGC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1124 4 +     19340 GTAC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173163 4 -    200418 GCAC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480126 4 -  10818551 GAAC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833834 4 -   4065304 GCTT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7854 4 -     70247 GCGT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361371 4 -  33153633 GTAC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3358 4 -     21056 GGAC
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181524 4 +   5085361 GTAC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24935 4 -     30710 GCAC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23842 4 -    147434 GCAC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76005 4 +   5488506 GTAC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104662 4 -    112863 GTAC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173843 4 -    224448 GTTC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28557 4 -     86975 GTAC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                       328 4 -       833 GCAC
i Zapus_hudsonius.ZapHud_scaffold_501999                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             778 4 +      1812 GTAC
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Echinops_telfairi.JH980293.1                            62854739 0 - 111700974 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Ochotona_princeps.JH802162.1                             2550710 5994 -   3988456 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                184770 0 +    200668 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       5164 7 +     36723 CACTGGG
s Acinonyx_jubatus.LLWD01001279.1                           812558 7 +   1699592 CATTGGG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24809 7 +     63021 CGCTGGG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415014 7 +  29979442 CATTGGG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215326 7 +    347723 CATTGGG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17775 7 -     61208 CACTGGG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47485 7 +     53615 CACTGGA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43463 7 +     44087 CGCTGGA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16071 7 -     21945 CACTGGA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17754 7 +     32033 CACTGGA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71918 7 -     84148 CACCGGG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44157 7 -     78289 CACCGGG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43596 7 +     55831 CACCGGG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42046 7 -     64179 CACCGGG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23680 7 -     24835 CACCGGG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40671 7 +     45454 CACCGGG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46320 7 +     70886 CACCAGG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8493 7 +     30854 CACCGGG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32627 7 +     42133 CACCGGG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585001 7 +   2318259 CATTGGG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176810 7 -    412891 CATTGGG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50115 7 -     68529 CATTGGG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     869 7 +     17741 CACTGGG
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1494 7 -     15923 CACTGGG
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671776 7 +   5030052 CACTGGG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               1769 7 -     16391 CACTGGG
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1329 7 -     17186 CACTGGG
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15688 7 -     32367 CACCAGG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19232 7 -     45910 CACCGGG
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5082 7 -     15198 CATGGAG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274377 7 +  21539123 CACCGGG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10544 7 +     48076 CACCGGG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5681 7 -     28759 CACCGGG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33234 7 +     44353 CACCGGG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48604 7 -     71267 CACCGGG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22663 7 -     33135 CACCGGG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5905 7 +     11645 CACTGGG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5913 7 -     19611 CACTGGG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956903 7 -  23207421 CACTGGG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         4112 7 -      4711 CACTGGG
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86010 7 +    124022 CACTGGG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21542 7 +    288883 CATTGGG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355928 7 +  48749331 CATTGGG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754496 7 +   1948126 CATTGGG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544635 7 -  45695690 CATTGGG
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529660 7 -   4408762 CATTGGG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7550 7 +     28062 CGCTGGG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42844 7 -     91139 CGCTGGG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20370 7 +     95584 CGCTGGG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20283 7 +    119600 CGCTGGG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9850 7 +     18648 CACTGGG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9384 7 -     13885 CGCTAGG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1455 7 -      8861 CACTGGG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453848 7 + 189096842 CACTGGG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1370 7 +      8664 CACTGGG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630675 7 +  17673402 CGTTGAG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664961 7 +   7040546 CGTTGAG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208621 7 +   1652518 CGTTGAG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505035 7 +  60362399 CATTGGG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8671 7 -     23171 CATTGGG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222014 7 +   9314153 CATTGGG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615149 7 +  59632846 CATTGGG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106730 7 -  63665305 CATTGGG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408731 7 -  46296322 CACTGGG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591004 7 +  44709034 CACTGGG
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1227 7 -      1880 CAGTGGG
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           269935 7 +    496798 CACTGGG
i Carlito_syrichta.NW_007259797.1                        C 0 I 182
s Carollia_perspicillata.CarPer_scaffold_1091333               279 7 +       553 CACTGAG
i Carollia_perspicillata.CarPer_scaffold_1091333         C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27353 7 -     39886 CACTGGG
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79217 7 -    217609 CACAGGG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996083 7 +  23392119 CACTGGG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999525 7 +  23407841 CACTGGG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62606 7 -     66877 CACTGGG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4768 7 -     12580 CACTGGG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42826 7 +     53515 CACTGGG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370757 7 -  26074798 CACTGGG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7646 7 -     34880 CACTGGG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66741 7 -     89041 CACTGGG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         1896 7 -      5494 CACTGGG
i Cephalopachus_bancanus.k141_1689090                    C 0 I 185
s Ceratotherium_simum.JH767749.1                          15491847 7 -  27778364 Cattggg
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18680 7 +     27315 CATTGGG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140658 7 -   4669795 CACTGGA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44400 7 +     47900 CACTGGA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44224 7 -     44860 CACTGGA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44213 7 -    148725 CACTGGA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26400 7 -     40656 CACTGGA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6366 7 +     20796 CACTGGA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11483 7 -     17524 CACTGGA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27205 7 -     34525 CACTGGA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10986 7 -     25376 CACTGGA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363582 7 -  39242232 CACTGGA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269298 7 +  21565898 CACTGGA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31672 7 -     45857 CACTGGA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26571 7 -     32606 CACTGGA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2730 7 +      8499 CACTGGA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25127 7 +     70610 CACTGGA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22097 7 +     36323 CACTGGA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12415 7 -     19938 CCTGGGG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30281 7 -     33796 CACTGGG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4798 7 -     15404 CACTGGG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8644 7 -     32913 TGCTGGG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19057 7 -     40346 CGCTGGG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19312 7 +    216457 CGCTGGG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19105 7 +     39636 CGCTGGG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238450 7 -   2543920 CACTGGG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3699 7 +      5346 CACTGGG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42181 7 -    112038 CGCTGGG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7752 7 +     34062 CACTGGG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                342988 7 +  18827391 CACTGGA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9535 7 -     44032 CACTGGA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304312 7 - 135778131 CACTGGA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14453 7 +     15858 CACTGGG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606029 7 -    839153 CACTGGG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                450 7 +      2406 CATTGGG
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             408737 7 -   2368649 CACTGGG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378613 7 - 200372422 CACTGGG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2162 7 -     84244 CACTGGG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806931 7 +  53390261 CACTGGG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2445 7 -      8242 CATTGAG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43946 7 -     83289 CACTGGG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114515 7 - 224834208 CGCTGGG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               8976 7 +     12657 CACTTAA
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4005 7 +     87169 CATTGGG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644663 7 -   1526836 CTCTGGG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18027 7 +     50838 CAGGGGG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   3996 7 +     36344 TGCTGGG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27772 7 +     75252 CACTGGG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109784 7 -   2246927 CCCTGGG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292216 7 +  12879189 CACTGGG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625435 7 -  35494412 CACTGGG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330122 7 -   2620052 CATTTGG
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664132 7 -   1390856 CATTGGG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138924 7 -    198055 CATTGGG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98537 7 -    115145 CACTGGG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950133 7 -  37912305 CGCTGGG
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5071 7 -     10735 CGCTGGG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10032 7 +     14636 CACTGGG
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5908 7 +     19438 TATTGAG
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239374 7 -    607251 CACTAGG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108383 7 -  10337057 CAGTGGG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30663 7 +    110024 CACTGGG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12634 7 +     18970 CACTGGG
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915756 7 +  41312741 CATTGGG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578556 7 +  14770903 CACTGGG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041009 7 -   4378816 cattggg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374947 7 +  39960074 cattggg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             328 7 -      1194 cattggg
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665715 7 +   7059049 CACTGGT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262515 7 +  21539334 CACTGGA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64775 7 -    133382 CACTGGG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             4994 7 +      7672 CACTGGG
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14424 7 -     24895 CACTGGG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42133 7 -     70999 CACTGGG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86095 7 +    112731 CACTGGG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42664 7 +     68309 CACTGGG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52990 7 -     65740 CACTGGG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23619 7 -     75513 CACTGGG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47817 7 -     97555 CACTGGG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4541 7 +     30972 CACTGGG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42261 7 -     52037 CACTGGG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58663 7 -    111500 CACTGGG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246467 7 - 206538554 CATTGGG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116253 7 - 205367284 CATTGGG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27350 7 -     30238 CATTGGG
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916072 7 -   3816255 CACTGGG
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     124661 7 -    137831 CACTGGG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8206 7 +     22493 CACTGGG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20283 7 -     32986 CACTGGG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 816 7 -     28519 CACTGGG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91078 7 -     95226 CACTGGG
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34145 7 -     36801 CACTGGG
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5464 7 -      8343 CACTGGG
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254478 7 - 186649187 CACTGGG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1638 7 -     78134 CACTGGG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14349 7 -     40692 CACTGGG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35751 7 +     49394 CAGGGGG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60619 7 -     66874 CAGGGGG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9493 7 -     42923 CAGGGGG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16493 7 -     53142 CACTGGG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30435 7 -    327341 CATTGGG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8760 7 +     48891 CATTGGG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932039 7 -  22651954 CACTGAG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_870725                 151 6 -       322 TGGGGG-
i Heterohyrax_brucei.HetBruBak_scaffold_870725           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7280 7 -     36432 CATTGGG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553806 7 -   1711038 CATGGGG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                731 6 -      2730 CAT-GGG
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142487 7 -    630532 CACTGGG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69347 7 +     83186 CATTGGG
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71512 7 +    143317 CACTGGG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5522 7 +     12352 CACTGGG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12706 7 +     55766 CACTGGG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052304 7 + 191637585 CACTGGG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801182 7 +  11177569 CACTGGG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4136 7 -    135385 CACTGGG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386478 7 +   7955117 CACTGGG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2053 7 +     11955 CACTGGG
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                3252 7 -     16823 CACTGGG
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1239480 7 +   9596543 CACTGGG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65494 7 -     97402 CACTGGG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42921 7 +    110728 CCCCGGG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    31821 7 -     49555 CAGTGGG
i Lasiurus_borealis.LasBor_scaffold_26245                I 244 I 49
s Lemur_catta.scaffold_24                                 14759142 7 +  30322482 CACTGGG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3834 7 -     13097 CACTGGG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3588 7 +      5940 CACTGGG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3418 7 -      5717 CACTGGG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9794 7 -     11567 CACTGGG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11175 7 -     12945 CACTGGG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8657 7 +     29618 CACTGGG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8653 7 +     31569 CACTGGG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8663 7 +     24756 CACTGGG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8663 7 +     16388 CACTGGG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813167 7 -   3914936 CGTTGGG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17521 6 +     24238 C-CTGGG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             334780 7 +    662738 CACTGGG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333543 7 -   1826925 CACTGGA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10240 7 +     19643 CGCTGGG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043903 7 -   6120653 CGCTGGG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080669 7 +  43346337 CACTGGG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614304 7 +  59628241 CATTGGG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44937 7 -     61512 CACTGGA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372599 7 -  60120075 CACTGGA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24862 7 +     30207 CACTGGA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21965 7 -     24934 CACTGGA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24815 7 +     30527 CACTGGA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35991 7 -     50087 CACTGGA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45735 7 +     51645 CACTGGA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414937 7 - 187317192 CACTGGA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399168 7 +  25927173 CACTGGA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48340 7 -     62418 CACTGGA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  878 7 +     14901 CACTGGA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44812 7 +     59329 CACTGGA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270720 7 +    668171 CACTGGA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                  996 7 +      1732 CACTGGA
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2518 7 +     17132 CACTGGA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222859 7 -    270270 CATTGGG
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322007 7 +  24302211 CACTGGA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356838 7 -    752769 CACTGGA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673213 7 -    737560 CATTGGG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220501 7 +    317179 CATTGGG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500698 7 +  40650429 CACTGGG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150050 7 +    207569 CATTGGG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25856 7 -     74585 CATTGGG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49800 7 -    140813 TGCTGGG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428899 7 +  29670104 CGCTGGG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     81079 7 +     93471 CACTGGG
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9959 7 +     17804 CACTGGG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10461 7 -     12984 CACTGGG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18775 7 -     26561 CACTGGG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984265 7 +  93316391 CACTGGG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45805 7 +    145209 CAATGGG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962100 7 +  27267610 TGCTGGG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362907 7 -   8254450 CACTGGG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41814 7 -     48117 CACTGGG
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22024 7 -     27822 CACTGGG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8174 7 +     27589 CGTTGGG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52061 7 -     62432 CACCGGG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   353178 7 +    437263 CACTGGG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178957 7 +    366855 CATTGGG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25196 7 -     82753 CACTGGG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18186 7 -     63510 CATTGGG
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38874 7 +     47283 CACTGAG
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592830 7 + 120012414 CTCTGGG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687215 7 + 129401213 CTCTGGG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39496511 7 + 130317789 CTCTGGG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82974 7 -     86153 CACTGGG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354789 7 +  14710649 CATTGGG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     62808 7 +     67721 CAGGGGA
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793160 7 +  10118263 cactggg
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387290 7 +   6019432 cgctggg
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383117 7 +   4330536 Cacgggg
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1926 7 +     18357 CACTGGG
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119415 7 +    130748 CACTGGG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945959 7 +   3037898 CGCTGGG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28662 7 +     34575 CACTGGG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1227348 7 -   7148211 CACTGGG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127894 7 -    149072 CATTGGG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53415 7 -    132029 CACTGGG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9510 7 -     16345 CACTGGG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15395 7 +     22201 CACTGGG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413616 7 -  22158432 CACTGGG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25793 7 -     54323 CACTGGG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197898 7 +   9404916 CATTGGG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636262 7 + 196305487 CGCTGGG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3016 7 -      3937 CGCTGGG
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564521 7 - 199412804 CGCTGGG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11054760 7 -  11899542 CAGGGAG
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451366 7 +   2017862 CATTGGG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435964 7 -    630418 CATTGGG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13961 7 +    150152 CACTGGG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92456 7 -    140218 CGCTGGG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3337 7 -     41509 CGCTGGG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096630 7 +  10937097 CACTGGG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13513 7 -     14239 CATTGGG
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103313 7 - 174332312 CCCTGGG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38944 7 +    559221 CATTGGG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39822 7 -     51505 CACTGGG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352825 7 +   1103335 CACTGGG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403881 7 -  44047080 CATTGGG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4400 7 +     17875 CATTGGG
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472507 7 - 189151597 CACTGGG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24173 7 -    230217 CATTGGG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461499 7 -  18783137 CATTGGG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972158 7 +   8748460 CATTGGG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615396 7 +   2937107 CACTGGG
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242840 7 - 183742232 CACTGGA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9302 7 +     21308 CACTGGA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291876 7 -  20919399 CACTGGA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  21950 7 -     27687 CACTGGA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15096 7 +     16796 CACTGGA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21907 7 -     23640 CACTGGA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14766 7 +     78924 CATTGGG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26024 7 +     31479 CCCTGGG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18393 7 -     24908 CCCTGGG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1469 7 +      9367 CGCTGGG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246535 7 +  18517816 CACTGGG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31642 7 -     56120 CACTGGG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12474 7 -     15039 CACTGGG
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2120 7 +     55023 CACTGGG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1670 7 -     89929 CACTGGG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2259 7 +     40849 CACTGGG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253923 7 +  14605196 CACTGGG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3463 7 +     22231 CTCTGGG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64549 7 +    207309 CGCTGGG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5643 7 -     25401 CGCTGGG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31385 7 +     58159 CGCTGGG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31661 7 +     63561 CGCTGGG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31421 7 +     51148 CGCTGGG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556392 7 -   4542175 CGCTGGG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31405 7 +     51125 CGCTGGG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4564 7 -      8168 CACTGGG
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7812 7 +     39866 CGCTGGG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2896 7 -      9282 CGCTGGG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42300 7 -     87950 CGCTGGG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42694 7 -     88961 CGCTGGG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7392 7 -     39403 CGCTGGG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42343 7 +     87928 CGCTGGG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7389 7 -     60166 CGCTGGG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14326 7 -     67232 CGCTGGG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42242 7 -     90634 CGCTGGG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43709 7 +     89403 CGCTGGG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177631 7 - 189387572 CACTGGG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192448 7 -   9816681 CACTGGG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              27245 7 +     69807 CACTGGG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44431 7 -     80239 CACTGGG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982297 7 +   4620579 CACTGGG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565802 7 -   2598838 CACTGGG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3440 7 -      7103 CACTGGG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4037 7 -     11706 CACTGGG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7775 7 -     30655 CACTGGG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34088 7 +     46564 CACTGGG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94367 7 -     98465 CACTGGG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8006 7 +     35169 CACTGGG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37142 7 +     52041 TGCTGGG
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51855 7 -     66298 CATTGGG
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4359 7 -     18639 CATTGGG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840547 7 -  28871421 CATTGGG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537066 7 -   4952924 CATTGGG
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098816 7 +  38429054 CATTGGG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26619 7 +     91421 CACTGGG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153111 7 -   7812017 CACTGGG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7486 7 +     72585 CACTGGG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52883 7 +     55069 CATTGGG
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022437 7 -  90668790 CGCTGGG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914438 7 +   3329780 CATTGGG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             1196 7 +      7119 CACTGGG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121804 7 + 195417433 CACTGGG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236046 7 -   7961872 CACTGGG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74477 7 -    116970 CATTGGG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3697 7 +     27962 CACTGGG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3592 7 +      6077 CACTGGG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3682 7 +      5971 CACTGGG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3603 7 +      5932 CACTGGG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1945 7 -      4390 CACTGGG
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391382 7 - 209938924 CACTGGG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3552 7 +      5979 CACTGGG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                121 7 -     22275 CACTGGG
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7554 7 +     16473 CAGTGGG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108719 7 + 121099817 TACTGGG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30286 7 -     47369 TACTGGG
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30672 7 -     79414 TACTGGG
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27363 7 -     34454 TACTGGG
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14766 7 -     22428 TACTGGG
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29918 7 -     47109 TACTGGG
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237975 7 +   5703754 CACTGGG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7565 7 +     21866 CACTGGG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115621 7 +    313613 CACTGGG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24938 7 +     27374 CACTGGG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28452 7 +     58920 CACTGGG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14948 7 -     45317 CACTGGG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22607 7 -     42441 CACTGGG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25285 7 -     29113 CACTGGG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28359 7 -     48123 CACTGGG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48918 7 +     77746 CTCTGGG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857967 7 -   1910179 CATTAGG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671050 7 +  18376816 CATTGAG
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868057 7 +   3870691 CACTGGG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6427 7 -     97271 CATTGGG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124589 7 +    196729 CATTGGG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643480 7 +  69701581 CACAGGG
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390876 7 +   1523678 CACTGGG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14032 7 +     22964 CATTGGG
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 233 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2405 7 +      5583 CACTGGG
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191321 7 +    199430 CATTGGG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105291 7 -    539355 CATTGGG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 160 7 +      9917 CACCGGG
i Tarsius_lariang.k141_1733899                           C 0 I 181
s Tarsius_wallacei.k141_226975                                6945 7 +     20590 CACCGGG
i Tarsius_wallacei.k141_226975                           C 0 I 186
s Theropithecus_gelada.CM009954.1                           352826 7 - 186847797 CACTGGA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19503 7 -     31044 CCCAGGG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479848 7 -    610378 CATTGGG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20484 7 +     26378 CACTGGG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33162 7 -     78344 CACTGGG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19809 7 +     25722 CACTGGG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28114 7 -     62838 CACTGGG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           28160 7 +     46913 CACTGGG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8967 7 -     28527 CACTGGG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30051 7 -     64340 CACTGGG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28088 7 -     63452 CACTGGG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9533 7 +     22490 CACTGGG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2959 7 -      6147 CACTGGG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9864 7 -     13050 CACTGGG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255104 7 -   6242583 CACTGGG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1128 7 +     19340 CACTGGG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173167 7 -    200418 TACTGGG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480130 6 -  10818551 CACTGG-
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833838 6 -   4065304 CACTG-G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7858 6 -     70247 CATCG-G
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361375 7 -  33153633 CACTGGG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3362 7 -     21056 CATTGGA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181528 7 +   5085361 CATTGGG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24939 7 -     30710 CACTGGG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23846 7 -    147434 CACTGGG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76009 7 +   5488506 CGTTGAG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104666 7 -    112863 CATTGGG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173847 7 -    224448 CACTGGG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28561 7 -     86975 CATTGGG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                       332 7 -       833 CTCTGAG
i Zapus_hudsonius.ZapHud_scaffold_501999                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             782 7 +      1812 CACTGGG
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Echinops_telfairi.JH980293.1                            62854739 0 - 111700974 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Ochotona_princeps.JH802162.1                             2550710 5994 -   3988456 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                184770 0 +    200668 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       5171 14 +     36723 AC---AG-TG-AAGA-ATTG
s Acinonyx_jubatus.LLWD01001279.1                           812565 15 +   1699592 ATG--AG-AG-AAGA-ATGG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24816 13 +     63021 -TG--AG--G-AGGA-ATTG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415021 15 +  29979442 ATG--AG-AG-AAGA-ATTG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215333 15 +    347723 ATG--AG-AG-AAGA-ATTG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17782 13 -     61208 AC---AG--G-AGGA-ATTG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47492 14 +     53615 AC---AG-TG-AAGA-ACTG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43470 14 +     44087 AC---AG-TG-AAGA-ACTG
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16078 14 -     21945 AC---AG-TG-AAGA-ACTG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17761 14 +     32033 AC---AG-TG-AAGA-ACTG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71925 14 -     84148 AC---GA-TG-GAGC-GTTG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44164 14 -     78289 AC---GA-TG-GAGC-GTTG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43603 14 +     55831 AC---GA-TG-GAGC-ATTG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42053 14 -     64179 AC---GA-TG-GAGC-ATTG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23687 14 -     24835 AC---GA-TG-GAGC-ATTG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40678 14 +     45454 AC---GA-TG-GAGC-ATTG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46327 14 +     70886 AC---GA-TG-GAGC-ATTG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8500 14 +     30854 AC---GA-TG-GAGC-ATTG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32634 14 +     42133 AC---GA-TG-GAGC-ATTG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585008 15 +   2318259 GC-A-AG-AG-AAGA-ATTG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176817 14 -    412891 AT-A-GG-GG--AGA-GTGG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50122 15 -     68529 GC-A-AG-AG-AAGA-ATTG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     876 14 +     17741 AC---AA-TG-AAGC-ATTG
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1501 14 -     15923 AC---AA-TG-AAGC-ATTG
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671783 14 +   5030052 AC---AA-TG-AAGC-ATTG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               1776 14 -     16391 AC---AA-TG-AAGC-ATTG
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1336 14 -     17186 AC---AA-TG-AAGC-ATTG
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15695 15 -     32367 AC-A-AG-GG-AAGA-ACTG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19239 15 -     45910 ATG--GG-GG-AAGA-ACAG
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5089 15 -     15198 ATGC-GG-GG--AGA-GTGG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274384 14 +  21539123 AC---GA-TG-AAGC-ATTG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10551 14 +     48076 AC---GA-TG-AAGC-ATTG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5688 14 -     28759 AC---GA-TG-AAGC-ATTG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33241 14 +     44353 AC---GA-TG-AAGC-ATTG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48611 14 -     71267 AC---GA-TG-AAGC-ATTG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22670 14 -     33135 AC---GA-TG-AAGC-ATTG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5912 14 +     11645 AC---AC-GG-AAGA-ATTG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5920 14 -     19611 AC---AC-GG-AAGA-ATTG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956910 15 -  23207421 AC-A-AA-AG-AAGA-ATTG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         4119 15 -      4711 AC-A-AA-AG-AAGA-ATTG
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86017 15 +    124022 GC-A-AG-AG-AAGA-ATTG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21549 15 +    288883 GC-A-AG-AG-AAGA-ATTG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355935 15 +  48749331 GC-A-AG-AG-AAGA-ATTG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754503 15 +   1948126 GC-A-AG-AG-AAGA-ATTG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544642 15 -  45695690 GC-A-AG-AG-AAGA-ATTG
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529667 15 -   4408762 GC-A-AG-AG-AAGA-ATTG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7557 14 +     28062 AC---AA-CG-AAGC-ATTG
i Cacajao_ayresi.k141_96119                              C 0 I 5
s Cacajao_calvus.k141_89051                                  42851 14 -     91139 AC---AA-CG-AAGC-ATTG
i Cacajao_calvus.k141_89051                              C 0 I 5
s Cacajao_hosomi.k141_81245                                  20377 14 +     95584 AC---AA-CG-AAGC-ATTG
i Cacajao_hosomi.k141_81245                              C 0 I 5
s Cacajao_melanocephalus.k141_619699                         20290 14 +    119600 AC---AA-CG-AAGC-ATTG
i Cacajao_melanocephalus.k141_619699                     C 0 I 5
s Callibella_humilis.k141_1233062                             9857 14 +     18648 AC---AA-CG-AAGC-ATTG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9391 14 -     13885 AC---AA-TG-AAGC-ACTG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1462 14 -      8861 AC---AA-TG-AAGC-ATTG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453855 14 + 189096842 AC---AA-TG-AAGC-ATTG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1377 14 +      8664 AC---AA-TG-AAGC-ATTG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630682 15 +  17673402 AC-A-AG-AG-AAGA-ATTG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664968 15 +   7040546 AC-A-AG-AG-AAGA-ATTG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208628 15 +   1652518 AC-A-AG-AG-AAGA-ATTG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505042 15 +  60362399 ATG--AG-AG-AAGA-ATTG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8678 15 -     23171 ATG--AG-AG-AAGA-ATTG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222021 15 +   9314153 ATG--AG-AG-AAGA-ATTG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615156 15 +  59632846 ATG--AG-AG-AAGA-ATTG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106737 15 -  63665305 ATG--AG-AG-AAGA-ATTG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408738 15 -  46296322 GC-A-AG-AG-AAGA-ATTG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591011 15 +  44709034 GC-A-AG-AG-AAGA-ATTG
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1234 15 -      1880 ATG--AA-GG-AAGA-ATTG
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270124 14 +    496798 AC---AA-CA-GAGA-ATTG
i Carlito_syrichta.NW_007259797.1                        I 182 C 0
s Carollia_perspicillata.CarPer_scaffold_1091333               286 15 +       553 ATGC-GG-GG--AGA-GCGG
i Carollia_perspicillata.CarPer_scaffold_1091333         C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27360 15 -     39886 ATG--AG-GG-AAGA-ATTG
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79224 15 -    217609 AC-A-AG-AC-AAGA-ATTA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996090 15 +  23392119 GTG--TG-GG-AAGA-GTTG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999532 15 +  23407841 ATG--TG-GG-AAGA-GTTG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62613 15 -     66877 ATG--TG-GG-AAGA-GTTG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4775 14 -     12580 AC---AA-CG-AAGC-ATTG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42833 14 +     53515 AC---AA-CG-AAGC-ATTG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370764 14 -  26074798 AC---AG-TG-AAGC-ATGG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7653 14 -     34880 AC---AG-TG-AAGC-ATGG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66748 14 -     89041 AC---AG-TG-AAGC-ATGG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2088 14 -      5494 ac---aa-ca-gagA-ATTG
i Cephalopachus_bancanus.k141_1689090                    I 185 C 0
s Ceratotherium_simum.JH767749.1                          15491854 15 -  27778364 ag-g-ag-ag-aaga-gttg
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18687 15 +     27315 AGG--AG-AG-AAGA-GTTG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140665 14 -   4669795 AC---AG-TG-AAGA-ATTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44407 14 +     47900 AC---AG-TG-AAAA-ATTG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44231 14 -     44860 AC---AG-TG-AAGA-ATTG
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44220 14 -    148725 AC---AG-TG-AAGA-ATTG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26407 14 -     40656 AC---AG-TG-AAGA-ACTG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6373 14 +     20796 AC---AG-TG-AAGA-ACTG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11490 14 -     17524 AC---AG-TG-AAGA-ACTG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27212 14 -     34525 AC---AG-TG-AAGA-ACTG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           10993 14 -     25376 AC---AG-TG-AAGA-ACTG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363589 14 -  39242232 AC---AG-TG-AAGA-ACTG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269305 14 +  21565898 AC---AG-TG-AAGA-ACTG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31679 14 -     45857 AC---AG-TG-AAGA-ACTG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26578 14 -     32606 AC---AG-TG-AAGA-ACTG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2737 14 +      8499 AC---AG-TG-AAGA-ACTG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25134 14 +     70610 AC---AG-TG-AAGA-ACTG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22104 14 +     36323 AC---AG-TG-AAGA-ACTG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12422 15 -     19938 ACG--TG-GG-AAGA-GCTG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30288 14 -     33796 AC---AC-TG-AAGA-ATTG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4805 14 -     15404 AC---AC-GG-AAGA-ATTG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8651 14 -     32913 AC---AA-TG-AAGC-AATG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19064 14 -     40346 AC---AA-TG-AAGC-AATG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19319 14 +    216457 AC---AA-TG-AAGC-AATG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19112 14 +     39636 AC---AA-TG-AAGC-AATG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238457 16 -   2543920 AT-g-ag-ag-aagaatttg
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3706 14 +      5346 AC---AA-TG-AAGC-ATTG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42188 14 -    112038 AC---AA-CG-AAGC-ATTG
i Chiropotes_israelita.k141_313004                       C 0 I 5
s Chiropotes_sagulatus.k141_1113111                           7759 14 +     34062 AC---AA-CG-AAGC-ATTG
i Chiropotes_sagulatus.k141_1113111                      C 0 I 5
s Chlorocebus_aethiops.ctg25                                342995 14 +  18827391 AC---AG-TG-AAGA-ACTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9542 14 -     44032 AC---AG-TG-AAGA-ATTG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304319 14 - 135778131 AC---AG-TG-AAGA-ACTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14460 15 +     15858 ACG--CG-AG-AAGA-ATTG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606036 15 -    839153 ACG--CG-AG-AAGA-ATTG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                457 15 +      2406 AC-A-AG-GG-AAGA-ATTG
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             408744 14 -   2368649 AC---AG-TG-AAGA-ATTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378620 14 - 200372422 AC---AG-TG-AAGA-ATTG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2169 14 -     84244 AC---AG-TG-AAGA-ATTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806938 15 +  53390261 AC-C-AG-GG-AAGA-ATTG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2452 15 -      8242 AC-A-AG-GG-AAAA-AAGG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43953 14 -     83289 AAG--AG--G-AGGA-ATTG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114522 14 - 224834208 ATG--AG--G-AGGA-ATTG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               8983 12 +     12657 AT-A-Aa-gg-gagg----t
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 168
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4012 15 +     87169 AGG--AG-AG-AAGA-ATGG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644670 15 -   1526836 AC-A-AA-CG-AAGA-TTTG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18034 15 +     50838 ATG--AG-GG-AGGA-ACTG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4003 15 +     36344 ATG--AA-GG-AAGA-ATTG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27779 15 +     75252 ATG--AA-GG-AAGA-ATTG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109791  6 -   2246927 ACG--GG-G-----------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292223 14 +  12879189 AC---AG-GG-AAGA-TTTG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625442 15 -  35494412 AC-A-AG-AC-AAGA-ATTG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330129 15 -   2620052 ATG--GG-GG-AAGA-GCGG
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664139 15 -   1390856 AGG--AG-AG-AAGA-GTTG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138931 15 -    198055 AGG--AG-AG-AAGA-GTTG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98544 15 -    115145 ATG--AG-GG-AAGA-GCTG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950140 16 -  37912305 AAGA-AG-GA-ATAG-GTTG
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5078 16 -     10735 AAGA-AG-GA-ATAG-GTTG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10039 15 +     14636 ATG--TG-GG-AAGA-GTTG
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5915 15 +     19438 ATG--AG-GG-AAGA-ATTG
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239381 15 -    607251 GC-A-AG-AG-AAGA-ATTG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108390 15 -  10337057 AC-A-GA-TG-AAAA-ATTG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30670 15 +    110024 AC-CAAG--G-AGGA-ATTG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12641 15 +     18970 AC-CAAG--G-AGGA-ATTG
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915763 15 +  41312741 ATG--AG-AG-AAGA-ATTG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578563 15 +  14770903 ATG--AG-AG-GAGA-ATTG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041016 15 -   4378816 ag-g-ag-gg-aaga-attg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374954 15 +  39960074 ag-g-ag-gg-aaga-attg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             335 15 -      1194 ag-g-ag-gg-aaga-attg
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665722 15 +   7059049 AT-C-AA-GG-AAGA-ATTG
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262522 14 +  21539334 AC---AG-TG-AAGA-ACTG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64782 15 -    133382 AC-A-AA-AG-AAGA-ATTG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             5001 15 +      7672 AC-A-AA-AG-AAGA-ATTG
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14431 14 -     24895 AC---AC-GG-AAGA-ATTG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42140 14 -     70999 AC---AC-GG-AAGA-ATTG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86102 14 +    112731 AC---AC-GG-AAGA-ATTG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42671 14 +     68309 AC---AC-GG-AAGA-ATTG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 52997 14 -     65740 AC---AC-GG-AAGA-ATTG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23626 14 -     75513 AC---AC-GG-AAGA-ATTG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47824 14 -     97555 AC---AC-GG-AAGA-ATTG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4548 14 +     30972 AC---AC-GG-AAGA-ATTG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42268 14 -     52037 AC---AC-GG-AAGA-ATTG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58670 14 -    111500 AC---AC-GG-AAGA-ATTG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246474 15 - 206538554 ATG--AG-AG-AAGA-ATGG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116260 15 - 205367284 ATG--AG-AG-AAGA-ATGG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27357 15 -     30238 ATG--AG-AG-AAGA-ATGG
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916079 15 -   3816255 ATG--AG-GG-AAGA-ATTG
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     124668 15 -    137831 ATG--GG-GG-AAGA-ACAG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8213 15 +     22493 ATG--GG-GG-AAGA-ACAG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20290 15 -     32986 ATG--GG-GG-AAGA-ACAG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 823 15 -     28519 ACG--AG-GG-AAGA-ATTG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91085 15 -     95226 GC-A-AG-AG-AAGA-ATTG
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34152 15 -     36801 AC-A-AC-GG-AAGA-ATTG
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5471 14 -      8343 AC---AG-TG-AAGA-ATTG
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254485 14 - 186649187 AC---AG-TG-AAGA-ATTG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1645 15 -     78134 AC-A-AG-GG-AAGA-ATTG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14356 14 -     40692 AC---AT-GG-AAGA-ATTG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35758 14 +     49394 AC---AT-GG-AAGA-ATTG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60626 14 -     66874 AC---AT-GG-AAGA-ATTG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9500 14 -     42923 AC---AT-GG-AAGA-ATTG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16500 14 -     53142 AC---AT-GG-AAGA-ATTG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30442 14 -    327341 AC---AG-GG-AAGA-ATGG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8767 15 +     48891 GC-A-AG-AG-AAGA-ATTG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932046 15 -  22651954 ATG--AG-GG-AAGA-ATTG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_870725                 157 15 -       322 GC-A-AG-GG-AAGA-GTTG
i Heterohyrax_brucei.HetBruBak_scaffold_870725           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7287 15 -     36432 AC-A-AG-AG-AAGA-ATTG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553813 15 -   1711038 GC-A-AG-GG-AAGC-ATTG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                737 15 -      2730 AC-A-AA-GG-AAGC-TTTG
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142494 14 -    630532 AC---AG-TG-AAGA-ATTG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69354 15 +     83186 AC-A-AA-AG-AAGA-ATGG
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71519 15 +    143317 ATG--TG-GG-GAGA-GTTG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5529 14 +     12352 AC---AG-TG-AAGA-ATTG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12713 14 +     55766 AC---AG-TG-AAGA-ATTG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052311 14 + 191637585 AC---AG-TG-AAGA-ATTG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801189 14 +  11177569 AC---AG-TG-AAGA-ATTG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4143 15 -    135385 ATG--AG-GG-GAAA-CGTG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386485 14 +   7955117 AC-A--G-GG-AGGA-ATTG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2060 14 +     11955 AC---AC-GG-AAGA-ATTG
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                3259 15 -     16823 AC-A-AG-AG-AAGA-ATTG
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1239487 13 +   9596543 AC---AG--G-AGGA-ATTG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65501 15 -     97402 AC-A-AG-AG-AAGA-ATTG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42928 14 +    110728 AC---GA-TG-AAGC-ATTG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62558 15 -     65777 ACG--AG-AG-GAGA-ATTG
i Lasiurus_borealis.LasBor_scaffold_16567                I 7 C 0
s Lemur_catta.scaffold_24                                 14759149 14 +  30322482 AC---AT-GG-AAGA-ATTG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3841 14 -     13097 AC---AA-TG-AAGC-ATTG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3595 14 +      5940 AC---AA-TG-AAGC-ATTG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3425 14 -      5717 AC---AA-TG-AAGC-ATTG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9801 14 -     11567 AC---AA-AG-AAGC-ACTG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11182 14 -     12945 AC---AA-AG-AAGC-ACTG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8664 14 +     29618 AC---AC-GG-AAGA-ATTG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8660 14 +     31569 AC---AC-GG-AAGA-ATTG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8670 14 +     24756 AC---AC-GG-AAGA-ATTG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8670 14 +     16388 AC---AC-GG-AAGA-ATTG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813174 15 -   3914936 ATG--AG-AG-AAGA-ATTG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17527 15 +     24238 ACG--AG-GG-AAGA-ATTG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             334787 15 +    662738 AC-A-AG-AC-AAGA-ATTG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333550 14 -   1826925 AC---AG-TG-AAGA-ATTG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10247 15 +     19643 ATG--GG-GG-AAGA-ATAG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043910 15 -   6120653 ATG--GG-GG-AAGA-ATAG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080676 15 +  43346337 GC-A-AA-GG-AAGA-ATTG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614311 15 +  59628241 ATG--AG-AG-AAGA-ATTG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44944 14 -     61512 AC---AG-TG-AAGA-ATTG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372606 14 -  60120075 AC---AG-TG-AAGA-ATTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24869 14 +     30207 AC---AG-TG-AAGA-ATTG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21972 14 -     24934 AC---AG-TG-AAGA-ATTG
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24822 14 +     30527 AC---AG-TG-AAGA-ATTG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 35998 14 -     50087 AC---AG-TG-AAGA-ATTG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45742 14 +     51645 AC---AG-TG-AAGA-ATTG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414944 14 - 187317192 AC---AG-TG-AAGA-ATTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399175 14 +  25927173 AC---AG-TG-AAGA-ATTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48347 14 -     62418 AC---AG-TG-AAGA-ATTG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  885 14 +     14901 AC---AG-TG-AAGA-ATTG
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44819 14 +     59329 AC---AG-TG-AAGA-ATTG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270727 14 +    668171 AC---AG-TG-AAGA-ATTG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                 1003 14 +      1732 AC---AG-TG-AAGA-ATTG
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2525 14 +     17132 AC---AG-TG-AAGA-ATTG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222866 15 -    270270 ATG--AG-GG-AAGA-ATTG
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322014 14 +  24302211 AC---AG-TG-AAGA-ATTG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356845 14 -    752769 AC---AG-TG-AAGA-ATTG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673220 15 -    737560 AC-C-AG-AG-AGGG-ATTG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220508 15 +    317179 AC-A-AG-AG-AAGG-ATTG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500705 14 +  40650429 AC-A--G-GG-AGGA-ATTG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150057 15 +    207569 ATG--AG-GG-AAGA-ATTG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25863 15 -     74585 ATG--AG-AG-AAGA-ATTG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49807 14 -    140813 ATG--AG--G-AGGA-ATTG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428906 14 +  29670104 ATG--AG--G-GGGA-ATTG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     81086 15 +     93471 AC-A-AG-AG-AAGA-ATTG
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9966 14 +     17804 AC---AA-CG-AAGC-ATTG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10468 14 -     12984 AC---AA-CG-AAGC-ATTG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18782 14 -     26561 AC---AA-CG-AAGC-ATTG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984272 14 +  93316391 AC---AC-GG-AAGA-ATTG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45812 15 +    145209 AC-A-AG-GG-AAGG-ATTG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962107 15 +  27267610 AC-CTAG--G-AGGA-ATTG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362914 15 -   8254450 ACG--AG-AG-GAGA-ATTG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41821 15 -     48117 ACG--AG-AG-GAGA-ATTG
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22031 14 -     27822 AC---AG-TG-AAGA-ATTG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8181 15 +     27589 ATG--AG-AG-AAGA-ATTG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52068 14 -     62432 AC---AC-GG-AAGA-ATCG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   353185 15 +    437263 AC-A-AG-AC-AAGA-ATTG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178964 15 +    366855 ATG--TG-GG-GAGA-ATGG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25203 15 -     82753 GC-A-AG-AG-AAGA-ATTG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18193 14 -     63510 AC---AG-AG-TAGA-ATGG
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38881 15 +     47283 AG-A-AG-AG-GAGA-ATTG
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592837 14 + 120012414 ATG--AG--G-CGCG-ATTG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687222 14 + 129401213 ATG--AG--G-AGCG-ATTG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39496518 14 + 130317789 ATG--AG--G-AGCG-ATTG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82981 15 -     86153 AC-A-AG-GG-GAGA-ATTG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354796 15 +  14710649 ATG--AG-AG-GAGA-ATCG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     62815 15 +     67721 ATG--AG-GG-AAGA-ATCG
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793167 15 +  10118263 ag-g-ag-ag-gaga-actg
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387297 15 +   6019432 ag-g-ag-ag-gaga-attg
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383124 15 +   4330536 ag-g-ag-ag-gaga-actg
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1933 15 +     18357 AGG--AG-AG-GAGA-ACTG
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119422 15 +    130748 ATG--AG-AG-AAGA-ATTG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945966 14 +   3037898 GTG--AG--G-AGGA-ATTG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28669 14 +     34575 AC---AG-TG-AAGA-ATTG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1227355 15 -   7148211 AC-A-AA-AC-AAGA-ATTG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127901 15 -    149072 AG-A-AG-GG-GAGA-ATGG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53422 14 -    132029 AC---AG-TG-AAGA-ATTG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9517 14 -     16345 AC---AG-TG-AAGA-ATTG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15402 14 +     22201 AC---AG-TG-AAGA-ATTG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413623 14 -  22158432 AC---AG-TG-AAGA-ATTG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25800 14 -     54323 AC---AG-TG-AAGA-ATTG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197905 15 +   9404916 ATG--AG-AG-AAGA-ATTG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636269 15 + 196305487 ATG--GG-AG-AAGA-ATAG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3023 15 -      3937 ATG--GG-AG-AAGA-ATAG
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564528 15 - 199412804 ATG--GG-GG-AAGA-ATAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11054767 15 -  11899542 ATG--AG-GG-AAGA-ATTG
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451373 15 +   2017862 ATG--AG-AG-AAGA-ATTG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435971 15 -    630418 GC-A-AG-AG-AAGA-ATTG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13968 15 +    150152 GC-A-AG-AG-AAGA-ACTG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92463 15 -    140218 AC-CGAG--G-AGGA-ATTG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3344 14 -     41509 ATG--GG--G-AGGA-ATTG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096637 15 +  10937097 AC-A-AG-AC-AAGA-ATTG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13520 15 -     14239 AG-A-AA-GG-AAGA-ATTG
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103320 15 - 174332312 ACG--AG-GG-AAGA-ATTG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38951 15 +    559221 ATG--AG-AG-AAGA-ATTG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39829 16 -     51505 ATGG-GG-GG-AAGA-ACAG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352832 15 +   1103335 ATG--GG-GG-AAGA-ACAG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403888 15 -  44047080 GC-A-AG-AG-AAGA-ATTG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4407 15 +     17875 GC-A-AG-AG-AAGA-ATTG
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472514 14 - 189151597 AC---AG-TG-AAGA-ATTG
i Pan_troglodytes.CM009242.2                             C 0 I 12
s Panthera_onca.PanOnc_flattened_line_3271                   24180 15 -    230217 ATG--AG-AG-AAGA-ATGG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461506 15 -  18783137 ATG--AG-AG-AAGA-ATGG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972165 15 +   8748460 ATG--AG-AG-AAGA-ATGG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615403 15 +   2937107 GC-A-AG-AG-AAGA-ATTG
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242847 14 - 183742232 AC---AG-TG-AAGA-ATTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9309 14 +     21308 AC---AG-TG-AAGA-ATTG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291883 14 -  20919399 AC---AG-TG-AAGA-ATTG
i Papio_hamadryas.Contig39                               C 0 T 1533
s Papio_kindae.k141_2214839                                  21957 14 -     27687 AC---AG-TG-AAGA-ATTG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15103 14 +     16796 AC---AG-TG-AAGA-ATTG
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21914 14 -     23640 AC---AG-TG-AAGA-ATTG
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14773 15 +     78924 AC-C-AG-AG-AAGA-ATGG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26031 15 +     31479 ATG--GG-GG-AAGA-ACAG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18400 15 -     24908 ATG--GG-GG-AAGA-ACAG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1476 16 +      9367 AAGA-AG-GG-ACAA-GTTG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246542 15 +  18517816 ATG--GG--AAAGGA-ATTG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31649 15 -     56120 AAG--AG-GG-AAGA-ATTA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12481 15 -     15039 AC-A-AA-AC-AAGA-ATTG
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2127 14 +     55023 AC---AG-TG-AGGA-ATTG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1677 14 -     89929 AC---AG-TG-AGGA-ATTG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2266 14 +     40849 AC---AG-TG-AGGA-ATTG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253930 14 +  14605196 AC---AG-TG-AGGA-ATTG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3470 15 +     22231 ACG--AG-AG-GAGA-GCTG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64556 14 +    207309 AC---AA-CG-AAGC-ATTG
i Pithecia_albicans.k141_1239476                         C 0 I 5
s Pithecia_chrysocephala.k141_785207                          5650 14 -     25401 AC---AA-CG-AAGC-ATTG
i Pithecia_chrysocephala.k141_785207                     C 0 I 5
s Pithecia_hirsuta.k141_640380                               31392 14 +     58159 AC---AA-CG-AAGC-ATTG
i Pithecia_hirsuta.k141_640380                           C 0 I 5
s Pithecia_mittermeieri.k141_1280039                         31668 14 +     63561 AC---AA-TG-AAGC-ATTG
i Pithecia_mittermeieri.k141_1280039                     C 0 I 5
s Pithecia_pissinattii.k141_878371                           31428 14 +     51148 AC---AA-CG-AAGC-ATTG
i Pithecia_pissinattii.k141_878371                       C 0 I 5
s Pithecia_pithecia.tarseq_165                              556399 14 -   4542175 AC---AA-CG-AAGC-ATTG
i Pithecia_pithecia.tarseq_165                           C 0 I 5
s Pithecia_vanzolinii.k141_1369553                           31412 14 +     51125 AC---AA-CG-AAGC-ATTG
i Pithecia_vanzolinii.k141_1369553                       C 0 I 5
s Platanista_gangetica.PlaMin_flattened_line_167872           4571 15 -      8168 AC-A-AG-AG-AAGA-ATTG
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7819 14 +     39866 AC---AA-TG-AAGC-AGTG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2903 14 -      9282 AC---AA-TG-AAGC-ACTG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42307 14 -     87950 AC---AA-TG-AAGC-AGTG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42701 14 -     88961 AC---AA-TG-AAGC-AGTG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7399 14 -     39403 AC---AA-TG-AAGC-AGTG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42350 14 +     87928 AC---AA-TG-AAGC-AGTG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7396 14 -     60166 AC---AA-TG-AAGC-AGTG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14333 14 -     67232 AC---AA-TG-AAGC-AGTG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42249 14 -     90634 AC---AA-TG-AAGC-AGTG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43716 14 +     89403 AC---AA-TG-AAGC-AGTG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177638 14 - 189387572 AC---AG-TG-AAGA-ATTG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192455 14 -   9816681 AC---AG-TG-AAGA-ATTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              27252 14 +     69807 AC---AG-TG-AAGA-ATTG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44438 14 -     80239 AC---AG-TG-AAGA-ATTG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982304 14 +   4620579 AC---AT-GG-AAGA-ATTG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565809 14 -   2598838 AC---AC-GG-AAGA-ATTG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3447 14 -      7103 AC---AC-GG-AAGA-ATTG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4044 14 -     11706 AC---AC-GG-AAGA-ATTG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7782 14 -     30655 AC---AC-GG-AAGA-ATTG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34095 14 +     46564 AC---AC-GG-AAGA-ATTG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94374 14 -     98465 AC---AC-GG-AAGA-ATTG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8013 14 +     35169 AC---AC-GG-AAGA-ATTG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37149 14 +     52041 ATG--AG--G-AGGA-ATTG
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51862 15 -     66298 ATG--AG-GG-GAGA-GTGG
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4366 15 -     18639 ATG--AG-AG-AAGA-ATTG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840554 15 -  28871421 ATG--AG-GG-AAGA-ATCG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537073 15 -   4952924 ATG--AG-GG-AAGA-ATCG
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098823 15 +  38429054 ATG--AG-AG-AAGA-ATGG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26626 14 +     91421 AC---AG-TG-AAGA-ATTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153118 14 -   7812017 AC---AG-TG-AAGA-ATTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7493 14 +     72585 AC---AG-TG-AAGA-ATTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52890 15 +     55069 GC-A-AG-AG-AAGA-ATTG
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022444 14 -  90668790 ATG--AG--G-AACG-ATTG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914445 15 +   3329780 AC-A-AG-GG-AAGA-ATTG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             1203 14 +      7119 AC---AG-TG-AAGA-ATTG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121811 14 + 195417433 AC---AG-TG-AAGA-ATTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236053 14 -   7961872 AC---AG-TG-AAGA-ATTG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74484 15 -    116970 ATG--AG-GG-AAGA-ATCC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3704 14 +     27962 AC---AA-TG-AAGC-ATTG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3599 14 +      6077 AC---AA-TG-AAGC-ATTG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3689 14 +      5971 AC---AA-TG-AAGC-ATTG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3610 14 +      5932 AC---AA-TG-AAGC-ATTG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1952 14 -      4390 AC---AA-TG-AAGC-ATTG
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391389 14 - 209938924 AC---AA-TG-AAGC-ATTG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3559 14 +      5979 AC---AA-TG-AAGC-ATTG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                128 14 -     22275 AC---AA-TG-AAGC-ATTG
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7561 15 +     16473 GC-A-AG-AG-AAGA-ATTG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108726 14 + 121099817 AC---AG-TG-GAGC-ATTG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30293 14 -     47369 AC---AG-TG-GAGC-ATTG
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30679 14 -     79414 AC---AG-TG-GAGC-ATTG
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27370 14 -     34454 AC---AG-TG-GAGC-ATTG
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14773 14 -     22428 AC---AG-TG-GAGC-ATTG
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29925 14 -     47109 AC---AG-TG-GAGC-ATTG
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237982 14 +   5703754 AC---AG-TG-AAGC-ATGG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7572 14 +     21866 AC---AG-TG-AAGC-ATGG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115628 15 +    313613 AC-C-AG-GA-AAGA-ACTG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24945 14 +     27374 AC---AG-TG-AAGA-ATTG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28459 14 +     58920 AC---AG-TG-AAGA-AGTG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14955 14 -     45317 AC---AG-TG-AAGA-ATTG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22614 14 -     42441 AC---AG-TG-AAGA-ATTG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25292 14 -     29113 AC---AG-TG-AAGA-ATTG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28366 14 -     48123 AC---AG-TG-AAGA-ATTG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48925 14 +     77746 ATG--AA--G-AGGG-ATTG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857974 15 -   1910179 AT-A-AG-GG-AAGA-ATTG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671057 15 +  18376816 AT-T-AA-GG-AAGA-ATCT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868064 14 +   3870691 AC-T--G-GG-AGGA-ATTG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6434 15 -     97271 ATG--AG-AG-AAGA-ATTG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124596 14 +    196729 AC---AG-AG-TAGA-ATGG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643487 15 +  69701581 AC-A-AG-AG-AAGA-ATTA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390883 14 +   1523678 AC---AG-TG-AAGA-ATTG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14039 15 +     22964 AAG--AG-AG-GAGA-ATTG
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2412 15 +      5583 ATG--AG-AG-AAGA-CTTG
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191328 15 +    199430 AGG--AG-GG-AAGA-ATTG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105298 15 -    539355 AGG--AG-GG-AAGA-ATTG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 348 14 +      9917 ac---ag-ca-gaga-aTTG
i Tarsius_lariang.k141_1733899                           I 181 C 0
s Tarsius_wallacei.k141_226975                                7138 14 +     20590 ac---ag-ca-gaga-aTTG
i Tarsius_wallacei.k141_226975                           I 186 C 0
s Theropithecus_gelada.CM009954.1                           352833 14 - 186847797 AC---AG-TG-AAGA-ATTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19510 15 -     31044 ACG--CG-GG-GAGA-GCTG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479855 15 -    610378 ATG--GGGGG--AGA-GCGG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20491 14 +     26378 AC---AG-TG-AAGA-ATTG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33169 14 -     78344 AC---AG-TG-AAGA-ATTG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19816 14 +     25722 AC---AG-TG-AAGA-ATTG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28121 14 -     62838 AC---AG-TG-AAGA-ATTG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           28167 14 +     46913 AC---AG-TG-AAGA-ATTG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8974 14 -     28527 AC---AG-TG-AAGA-ATTG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30058 14 -     64340 AC---AG-TG-AAGA-ATTG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28095 14 -     63452 AC---AG-TG-AAGA-ATTG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9540 14 +     22490 AC---AG-TG-AAGA-ATTG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2966 14 -      6147 AC---AG-TG-AAGA-ATTG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9871 14 -     13050 AC---AG-TG-AAGA-ATTG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255111 14 -   6242583 AC---AG-TG-AAGA-ATTG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1135 14 +     19340 AC---AG-TG-AAGA-ATTG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173174 15 -    200418 AC-A-AG-AG-AAGA-ATTG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480136 15 -  10818551 AC-A-AG-AA-AAGA-GTTA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833844 15 -   4065304 ACG--AG-GG-AAGA-GCTG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7864 15 -     70247 ACG--AG-GG-AAGG-GCTG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361382 15 -  33153633 AC-A-AG-AC-AAGA-ATTG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3369 15 -     21056 AC-C-AG-GG-GAGA-ATTG
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181535 15 +   5085361 ATG--AG-AG-AAGA-ATTG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24946 14 -     30710 AC---AC-GG-AAGA-ATTG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23853 14 -    147434 AC---AC-GG-AAGA-ATTG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76016 15 +   5488506 AC-A-AG-AG-AAGA-ATTG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104673 15 -    112863 ATG--AG-AG-AAGA-ATTG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173854 15 -    224448 AC-A-AG-GG-AGAA-ATTG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28568 15 -     86975 ATG--AG-AG-AAGA-ATTG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                       339 13 -       833 AC---AG--G-AGGA-ATTG
i Zapus_hudsonius.ZapHud_scaffold_501999                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             789 15 +      1812 AC-A-AG-AG-AAGA-ATTG
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Echinops_telfairi.JH980293.1                            62854739  0 - 111700974 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Ochotona_princeps.JH802162.1                             2550710 5994 -   3988456 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                184770  0 +    200668 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       5185 12 +     36723 A-C---AGGA-C-TGC---------T-G
s Acinonyx_jubatus.LLWD01001279.1                           812580  8 +   1699592 G-C---AGGA-C-T--------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24829 20 +     63021 G-C---AGAA-C-TGCCA-AGCTGGT-G
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415036  8 +  29979442 G-C---AGGA-C-T--------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215348  8 +    347723 G-C---AGGA-C-T--------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17795 12 -     61208 G-C---AGAA-C-TGC---------C-A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47506 12 +     53615 A-C---AAGA-C-TGC---------C-G
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43484 12 +     44087 A-C---AAGA-C-TGC---------C-G
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16092 12 -     21945 A-C---AAGA-C-TGC---------C-G
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17775 12 +     32033 A-C---AAGA-C-TGC---------C-G
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71939 12 -     84148 A-C---AAGA-C-TGC---------T-G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44178 12 -     78289 A-C---AAGA-C-TGC---------T-G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43617 12 +     55831 A-C---AAGA-C-TGC---------T-G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42067 12 -     64179 A-C---AAGA-C-TGC---------T-G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23701 12 -     24835 A-C---AAGA-C-TGC---------T-G
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40692 12 +     45454 A-C---AAGA-C-TGC---------T-G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46341 12 +     70886 A-C---AAGA-C-TGC---------T-G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8514 12 +     30854 A-C---AAGA-C-TGC---------T-G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32648 12 +     42133 A-C---AAGA-C-TGC---------T-G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585023  8 +   2318259 G-C---AGGA-T-T--------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      176831  8 -    412891 A-C---AGGA-C-T--------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50137  8 -     68529 G-C---AGGA-T-T--------------
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                     890 12 +     17741 A-C---AAGA-C-TGC---------T-G
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1515 12 -     15923 A-C---AAGA-C-TGC---------T-G
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671797 12 +   5030052 A-C---AAGA-C-TGC---------T-G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               1790 12 -     16391 A-C---AAGA-C-TGC---------T-G
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1350 12 -     17186 A-C---AAGA-C-TGC---------T-G
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15710 12 -     32367 A-C---AGAA-C-TTT---------T-G
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19254 13 -     45910 G-C---AGGA-C-TTC---------TGG
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5104  8 -     15198 A-C---AGGA-C-T--------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274398 12 +  21539123 A-C---AAGA-C-TGC---------T-G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10565 12 +     48076 A-C---AAGA-C-TGC---------T-G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5702 12 -     28759 A-C---AAGA-C-TGC---------T-G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33255 12 +     44353 A-C---AAGA-C-TGC---------T-G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48625 12 -     71267 A-C---AAGA-C-TGC---------T-G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22684 12 -     33135 A-C---AAGA-C-TGC---------T-G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5926 12 +     11645 G-C---AGGA-C-TGC---------T-G
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               5934 12 -     19611 G-C---AGGA-C-TGC---------T-G
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956925  8 -  23207421 G-C---AGGA-C-T--------------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         4134  8 -      4711 G-C---AGGA-C-T--------------
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86032  8 +    124022 G-C---AGGA-T-T--------------
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21564  8 +    288883 G-C---AGGA-T-T--------------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20355950  8 +  48749331 G-C---AGGA-T-T--------------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754518  8 +   1948126 G-C---AGGA-T-T--------------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544657  8 -  45695690 G-C---AGGA-T-T--------------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529682  8 -   4408762 G-C---AGGA-T-T--------------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7576  4 +     28062 --------------GC---------C-G
i Cacajao_ayresi.k141_96119                              I 5 C 0
s Cacajao_calvus.k141_89051                                  42870  4 -     91139 --------------GC---------T-G
i Cacajao_calvus.k141_89051                              I 5 C 0
s Cacajao_hosomi.k141_81245                                  20396  4 +     95584 --------------GC---------C-G
i Cacajao_hosomi.k141_81245                              I 5 C 0
s Cacajao_melanocephalus.k141_619699                         20309  4 +    119600 --------------GC---------C-G
i Cacajao_melanocephalus.k141_619699                     I 5 C 0
s Callibella_humilis.k141_1233062                             9871 12 +     18648 A-C---AAGA-C-TGC---------T-G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9405 12 -     13885 A-C---AAGA-C-TGC---------T-G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1476 12 -      8861 A-C---AAGA-C-TGC---------T-G
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453869 12 + 189096842 A-C---AAGA-C-TGC---------T-G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1391 12 +      8664 A-C---AAGA-C-TGC---------T-G
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630697  8 +  17673402 G-T---AGGA-C-T--------------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4664983  8 +   7040546 G-T---AGGA-C-T--------------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208643  8 +   1652518 G-T---AGGA-C-T--------------
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505057  8 +  60362399 G-C---AGGA-C-T--------------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8693  8 -     23171 G-C---AGGA-C-T--------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222036  8 +   9314153 G-C---AGGA-C-T--------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615171  8 +  59632846 G-C---AGGA-C-T--------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106752  8 -  63665305 G-C---AGGA-C-T--------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408753  8 -  46296322 G-C---AGGA-T-T--------------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591026  8 +  44709034 G-C---AGGA-T-T--------------
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1249 12 -      1880 G-C---AGAG-C-TGC---------T-G
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270138  7 +    496798 G-C---AGGA-T----------------
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_1091333               301  8 +       553 A-T---AGGA-C-T--------------
i Carollia_perspicillata.CarPer_scaffold_1091333         C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27375 12 -     39886 G-A---AGAA-C-TGC---------T-G
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79239  1 -    217609 G---------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996105 12 +  23392119 G-C---AGAC-C-TGC---------T-G
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999547 12 +  23407841 G-C---AGAC-C-TGC---------T-G
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62628 12 -     66877 G-C---AGAC-C-TGC---------T-G
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4789 12 -     12580 A-C---AAGA-C-TGC---------T-G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42847 12 +     53515 A-C---AAGA-C-TGC---------T-G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370778 12 -  26074798 A-C---AAGA-C-TGC---------T-G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7667 12 -     34880 A-C---AAGA-C-TGC---------T-G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66762 12 -     89041 A-C---AAGA-C-TGC---------T-G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2102  7 -      5494 G-C---AGGA-T----------------
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15491869  8 -  27778364 G-C---AGGA-C-G--------------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18702  8 +     27315 G-C---AGGA-C-G--------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140679 12 -   4669795 G-C---AAGA-C-TGC---------C-G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44421 12 +     47900 G-C---AAGA-C-TGC---------C-G
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44245 12 -     44860 G-C---AAGA-C-TGC---------C-G
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44234 12 -    148725 G-C---AAGA-C-TGC---------C-G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26421 12 -     40656 A-C---AAGA-C-TGC---------C-G
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6387 12 +     20796 A-C---AAGA-C-TGC---------C-G
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11504 12 -     17524 A-C---AAGA-C-TGC---------C-G
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27226 12 -     34525 A-C---AAGA-C-TGC---------C-G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11007 12 -     25376 A-C---AAGA-C-TGC---------T-G
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363603 12 -  39242232 A-C---AAGA-C-TGC---------C-G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269319 12 +  21565898 A-C---AAGA-C-TGC---------T-G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31693 12 -     45857 A-C---AAGA-C-TGC---------T-G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26592 12 -     32606 A-C---AAGA-C-TGC---------C-G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2751 12 +      8499 A-C---AAGA-C-TGC---------C-G
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25148 12 +     70610 A-C---AAGA-C-TGC---------C-G
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22118 12 +     36323 A-C---AAGA-C-TGC---------C-G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12437 11 -     19938 G-C---GGGA-C-C-C---------T-G
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 1
s Cheirogaleus_major.k141_666340                             30302 12 -     33796 G-C---AGGA-C-TGC---------T-G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             4819 12 -     15404 G-C---AGGA-C-TGC---------T-G
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8665 12 -     32913 G-C---GGGA-C-TGC---------T-G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19078 12 -     40346 G-C---GGGA-C-TGC---------T-G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19333 12 +    216457 G-C---GGGA-C-TGC---------T-G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19126 12 +     39636 G-C---GGGA-C-TGC---------T-G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238473 12 -   2543920 g-a---aggc-C-TGC---------T-G
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_313004                           42207  4 -    112038 --------------GC---------C-G
i Chiropotes_israelita.k141_313004                       I 5 C 0
s Chiropotes_sagulatus.k141_1113111                           7778  4 +     34062 --------------GC---------C-G
i Chiropotes_sagulatus.k141_1113111                      I 5 C 0
s Chiropotes_albinasus.k141_1946120                           3720  8 +      5346 A-CGAGACT-------------------
i Chiropotes_albinasus.k141_1946120                      C 0 I 4
s Chlorocebus_aethiops.ctg25                                343009 12 +  18827391 A-C---AAGA-C-TGC---------T-G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9556 12 -     44032 A-C---AAGA-C-TGC---------C-G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304333 12 - 135778131 A-C---AAGA-C-TGC---------T-G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14475 12 +     15858 G-C---AGGA-C-TGT---------T-G
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606051 12 -    839153 G-C---AGGA-C-TGT---------T-G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                472 12 +      2406 G-C---AGAA-C-TGT---------T-G
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             408758 12 -   2368649 A-C---CAGA-C-TGC---------T-G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378634 12 - 200372422 A-C---CAGA-C-TGC---------T-G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2183 12 -     84244 A-C---CAGA-C-TGC---------T-G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806953  8 +  53390261 G-C---AGGA-C-T--------------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2467  8 -      8242 G-A---GGGC-C-T--------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 43967 20 -     83289 G-C---AGAA-C-TGTCC-AGCTGGT-G
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114536 20 - 224834208 G-C---AGAA-C-TGCCT-AGCTGGT-G
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9163  8 +     12657 a-c---agaa-a-T--------------
i Crocidura_indochinensis.CroInd_scaffold_77846          I 168 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4027  8 +     87169 G-C---AGGA-C-T--------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644685 12 -   1526836 G-C---AGAG-C-TGC---------G-G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18049 12 +     50838 G-C---AAAC-C-TGC---------T-G
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4018 12 +     36344 G-C---AGAC-C-TGC---------T-G
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27794 12 +     75252 G-C---AGAC-C-TGC---------T-G
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292237 12 +  12879189 G-C---AGGA-C-TGC---------T-G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625457  8 -  35494412 G-C---AGCA-C-T--------------
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330144  8 -   2620052 A-C---AGGA-C-T--------------
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664154  8 -   1390856 G-T---AGGA-C-T--------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138946  8 -    198055 G-C---AGGA-C-G--------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98559 12 -    115145 G-C---AGAC-C-CGC---------T-G
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950156 12 -  37912305 G-C---AGAG-C-TAC---------T-G
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5094 12 -     10735 G-C---AGAG-C-TAC---------T-G
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10054 12 +     14636 G-C---AGAC-C-TGC---------T-G
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62854739 11 - 111700974 G-C---AGGA-C-CGC---------C--
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               5930  8 +     19438 T-C---AGGA-C-T--------------
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239396  8 -    607251 G-C---AGGA-T-T--------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108405 12 -  10337057 G-C---AGGA-C-TGC---------T-G
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30685 20 +    110024 G-C---AGAA-C-TGCCT-GGCTGGT-G
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12656 20 +     18970 G-C---AGAA-C-TGCCT-GGCTGGT-G
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915778  8 +  41312741 G-C---AGGA-C-T--------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578578  9 +  14770903 G-C---AGGGAC-T--------------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041031  8 -   4378816 g-C---AGGG-C-T--------------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21374969  8 +  39960074 g-C---AGGG-C-T--------------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             350  8 -      1194 g-C---AGGG-C-T--------------
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665737  8 +   7059049 G-C---AGga-c-t--------------
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262536 12 +  21539334 A-C---AAGA-C-TGC---------T-G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64797  8 -    133382 G-C---AGGA-C-T--------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             5016  8 +      7672 G-C---AGGA-C-T--------------
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14445 12 -     24895 G-C---AGGA-C-TGC---------T-G
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42154 12 -     70999 G-C---AGGA-C-TGC---------T-G
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86116 12 +    112731 G-C---AGGA-C-TGC---------T-G
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42685 12 +     68309 G-C---AGGA-C-TGC---------T-G
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53011 12 -     65740 G-C---AGGA-C-TGC---------T-G
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23640 12 -     75513 G-C---AGGA-C-TGC---------T-G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 47838 12 -     97555 G-C---AGGA-C-TGC---------T-G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4562 12 +     30972 G-C---AGGA-C-TGC---------T-G
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42282 12 -     52037 G-C---AGGA-C-TGC---------T-G
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58684 12 -    111500 G-C---AGGA-C-TGC---------T-G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246489  8 - 206538554 G-C---AGAA-C-T--------------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116275  8 - 205367284 G-C---AGAA-C-T--------------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27372  8 -     30238 G-C---AGAA-C-T--------------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916094 12 -   3816255 G-C---AGAA-C-TGC---------T-G
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     124683 13 -    137831 G-C---GGGA-C-TGC---------TGG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8228 13 +     22493 G-C---GGGA-C-TGC---------TGG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20305 13 -     32986 G-T---GGGA-C-TGC---------TGG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 838 11 -     28519 G-C---A-GA-C-TGC---------T-G
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91100  8 -     95226 A-C---ATGA-T-T--------------
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34167 12 -     36801 G-C---AGGA-T-TGC---------T-G
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5485 12 -      8343 A-C---AAGA-C-TGC---------T-G
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254499 12 - 186649187 A-C---AAGA-C-TGC---------T-G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1660 12 -     78134 G-C---AGGA-C-CGC---------T-G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14370 12 -     40692 G-C---AGGA-C-TGC---------T-G
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35772 12 +     49394 G-C---AGGA-C-TGC---------T-G
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60640 12 -     66874 G-C---AGGA-C-TGC---------T-G
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9514 12 -     42923 G-C---AGGA-C-TGC---------T-G
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16514 12 -     53142 G-C---AGGA-C-TGC---------T-G
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30456  8 -    327341 G-C---AGAA-C-T--------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8782  8 +     48891 G-C---AGGA-T-T--------------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932061 12 -  22651954 G-C---AGAA-C-TGC---------T-G
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_870725                 172 12 -       322 G-C---AGGC-C-CGG---------T-G
i Heterohyrax_brucei.HetBruBak_scaffold_870725           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7302  8 -     36432 G-C---AGGA-C-T--------------
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553828  8 -   1711038 G-C---TGGA-C-T--------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                752  8 -      2730 G-C---TGGA-C-T--------------
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142508 12 -    630532 A-C---AAGA-C-TGC---------T-G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69369  8 +     83186 T-C---AGGA-C-T--------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71534 11 +    143317 G-C----GAC-C-CGC---------T-G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5543 12 +     12352 A-C---AAGA-C-TGC---------T-G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12727 12 +     55766 A-C---AAGA-C-TGC---------T-G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052325 12 + 191637585 A-C---AAGA-C-TGC---------T-G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801203 12 +  11177569 A-C---AAGA-C-TGC---------T-G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4158 12 -    135385 G-C---AGAA-G-TGC---------T-G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386499 12 +   7955117 G-C---AGGA-C-TGC---------T-G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2074 12 +     11955 G-C---AGGA-C-TGC---------T-G
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                3274  8 -     16823 G-C---GGCA-C-T--------------
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1239500 12 +   9596543 G-C---AGAA-C-TGC---------C-A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65516  8 -     97402 G-C---AGGA-C-T--------------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          42942 12 +    110728 A-G---AAGA-C-TGC---------T-G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62573  9 -     65777 G-C---AGGGGT-T--------------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14759163 12 +  30322482 G-C---AGGA-C-TGC---------T-G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        3855 12 -     13097 A-C---GAGA-C-TGC---------T-G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3609 12 +      5940 A-C---GAGA-C-TGC---------T-G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3439 12 -      5717 A-T---GAGA-C-TGC---------T-G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9815 12 -     11567 A-C---AAGA-T-TGC---------T-G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11196 12 -     12945 A-C---AAGA-T-TGC---------T-G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8678 12 +     29618 G-C---AGGA-C-TGC---------T-G
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8674 12 +     31569 G-C---AGGA-C-TGC---------T-G
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8684 12 +     24756 G-C---AGGA-C-TGC---------T-G
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8684 12 +     16388 G-C---AGGA-C-TGC---------T-G
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813189  8 -   3914936 G-C---AGGA-C-T--------------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17542 12 +     24238 G-C---AGGA-C-TGT---------G-G
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             334802  8 +    662738 G-C---AGCA-C-T--------------
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333564 12 -   1826925 G-C---AAGA-C-TGC---------C-G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10262 13 +     19643 G-C---AGGA-C-TGC---------TGG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5043925 13 -   6120653 G-C---AGGA-C-TGC---------TGG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080691 12 +  43346337 G-C---AGGC-C-TGC---------T-G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614326  8 +  59628241 G-C---AGGA-C-T--------------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44958 12 -     61512 A-C---AAGA-C-TGC---------C-A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372620 12 -  60120075 A-C---AAGA-C-TGC---------C-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24883 12 +     30207 A-C---AAGA-C-TGC---------C-A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21986 12 -     24934 A-C---AAGA-C-TGC---------C-A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24836 12 +     30527 A-C---AAGA-C-TGC---------C-G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36012 12 -     50087 A-C---AAGA-C-TGC---------C-G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45756 12 +     51645 A-C---AAGA-C-TGC---------C-G
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414958 12 - 187317192 A-C---AAGA-C-TGC---------C-G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399189 12 +  25927173 A-C---AAGA-C-TGC---------T-G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48361 12 -     62418 A-C---AAGA-C-TGC---------C-G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  899 12 +     14901 A-C---AAGA-C-TGC---------C-A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44833 12 +     59329 A-C---AAGA-C-TGC---------C-G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270741 12 +    668171 A-C---AAGA-C-TGC---------C-G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                 1017 12 +      1732 A-C---AAGA-C-TGC---------C-A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2539 12 +     17132 A-C---AAGA-C-TGC---------C-G
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222881  8 -    270270 T-C---AGGA-C-T--------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322028 12 +  24302211 A-C---AAGA-C-TGC---------C-G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356859 12 -    752769 A-C---AAGA-C-TGC---------C-G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673235  8 -    737560 G-C---AGGA-C-T--------------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220523  8 +    317179 G-C---AGGA-C-T--------------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500719 12 +  40650429 G-C---AGGA-C-TGC---------T-G
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150072  8 +    207569 G-C---AGGA-C-A--------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25878  8 -     74585 G-C---GGGA-C-T--------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49821 20 -    140813 G-C---AGAA-A-TGCCA-AGCTGGT-G
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428920 20 +  29670104 G-C---AGAC-C-TGCCT-AACTGGT-G
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     81101  8 +     93471 G-C---AGGA-C-T--------------
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9980 12 +     17804 A-C---AAGA-C-TGC---------T-G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10482 12 -     12984 A-C---AAGA-C-TGC---------T-G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18796 12 -     26561 A-C---AAGA-C-TGC---------T-G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984286 12 +  93316391 G-C---AGGA-C-TAC---------T-G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45827 12 +    145209 G-C---AGGA-C-TGC---------T-G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962122 20 +  27267610 G-C---AGAA-T-TGCCT-AGCTGGT-G
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362929  8 -   8254450 G-C---AGAA-C-T--------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41836  8 -     48117 G-C---AGAA-C-T--------------
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22045 12 -     27822 A-C---AAGA-C-TGC---------C-G
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8196  8 +     27589 G-C---AGGA-C-T--------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52082 12 -     62432 G-C---AGGA-C-TAC---------T-G
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   353200  8 +    437263 G-C---AGCA-C-T--------------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178979  8 +    366855 A-C---AGGC-C-T--------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25218  8 -     82753 G-C---AGGA-T-T--------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18207  8 -     63510 G-C---AGGA-C-T--------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          38896  8 +     47283 T-C---AGGA-C-T--------------
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35592851 20 + 120012414 G-C---AGAA-C-TGCCA-AGCTGGT-G
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687236 20 + 129401213 G-C---AGAA-C-TGCCA-AGCTGGT-G
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39496532 20 + 130317789 G-C---AGAA-C-TGCCA-AGCTGGT-G
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             82996 12 -     86153 G-C---AGGA-C-TGC---------T-G
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14354811  8 +  14710649 G-C---AGGA-C-T--------------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     62830 12 +     67721 A-C---AGAC-C-TGC---------T-G
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793182  8 +  10118263 G-C---AGGA-C-T--------------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387312  8 +   6019432 G-C---GAGA-C-T--------------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383139  8 +   4330536 G-C---AGGA-C-T--------------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1948  8 +     18357 G-C---AGGA-C-T--------------
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119437 12 +    130748 G-C---AGGA-T-GGT---------T-G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             945980 20 +   3037898 G-C---AGAG-C-TGC-AGAGCTGCA-G
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28683 12 +     34575 A-A---CAGA-C-TGC---------T-G
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1227370  8 -   7148211 G-C---AGCA-C-T--------------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127916  8 -    149072 A-C---AGGA-C-T--------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53436 12 -    132029 A-C---AAGA-C-TGC---------T-G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9531 12 -     16345 A-C---AAGA-C-TGC---------T-G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15416 12 +     22201 A-C---AAGA-C-TGC---------T-G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413637 12 -  22158432 A-C---AAGA-T-TGC---------T-G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  25814 12 -     54323 A-C---AAGA-T-TGC---------T-G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197920  8 +   9404916 G-C---AGGA-C-T--------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636284 13 + 196305487 G-C---AGGA-C-TGC---------TGG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3038 13 -      3937 G-C---AGGA-C-TGC---------TGG
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564543 13 - 199412804 G-C---AGGA-C-TGC---------TGG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11054782 12 -  11899542 G-C---AGAC-C-TGC---------T-G
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451388  8 +   2017862 G-C---AGGA-C-T--------------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435986  8 -    630418 G-C---AGGA-T-T--------------
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13983  8 +    150152 A-C---ACGA-T-T--------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92478 20 -    140218 G-C---AGAA-C-TGCCT-GGCTGGT-G
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3358 20 -     41509 G-C---TGAA-A-GGTCT-GGCTGGT-G
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096652  8 +  10937097 G-C---AGCA-C-T--------------
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13535 12 -     14239 G-C---AGGA-C-TGC---------T-C
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103335 12 - 174332312 G-C---AGGA-C-TGT---------G-G
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        38966  8 +    559221 G-C---AGGA-C-T--------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39845 13 -     51505 G-C---GGGA-C-CGC---------TGG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352847 13 +   1103335 G-C---GGGA-C-CGC---------TGG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403903  8 -  44047080 G-C---AGGA-t-t--------------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4422  8 +     17875 G-C---AGGA-T-T--------------
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             12137 13 -     26668 ACC---AAGA-C-TGC---------T-G
i Pan_troglodytes.NBAG03003091.1                         I 30 I 214
s Panthera_onca.PanOnc_flattened_line_3271                   24195  8 -    230217 G-C---AGAA-C-T--------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461521  8 -  18783137 G-C---AGAA-C-T--------------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972180  8 +   8748460 G-C---AGAA-C-T--------------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615418  8 +   2937107 G-C---AGGA-T-T--------------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242861 12 - 183742232 G-C---AAGA-C-TGC---------C-G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9323 12 +     21308 G-C---AAGA-C-TGC---------C-G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  290364 10 -  20919399 G-C---AAGA-C-TGC------------
i Papio_hamadryas.Contig39                               T 1533 I 1534
s Papio_kindae.k141_2214839                                  21971 12 -     27687 G-C---AAGA-C-TGC---------C-G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15117 12 +     16796 G-C---AAGA-C-TGC---------C-G
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21928 12 -     23640 G-C---AAGA-C-TGC---------C-G
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14788  8 +     78924 G-C---AGGA-C-T--------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26046 13 +     31479 G-C---AGGA-C-TGC---------TAG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18415 14 -     24908 G-C---AGGA-CGTGC---------TAG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1492 12 +      9367 G-T---AGAG-C-TGC---------T-G
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246557 20 +  18517816 G-C---GGAA-C-TGCCT-GGCTGGT-G
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31664 12 -     56120 G-C---AGAA-C-TGC---------T-G
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12496  8 -     15039 G-C---AGCA-C-T--------------
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2141 12 +     55023 A-C---CAGA-C-TGC---------T-G
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1691 12 -     89929 A-C---CAGA-C-TGC---------T-G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2280 12 +     40849 A-C---CAGA-C-TGC---------T-G
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253944 12 +  14605196 A-C---CAGA-C-TGC---------T-G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3485  9 +     22231 G-C---AGGGAC-T--------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64575  3 +    207309 --------------GC---------T--
i Pithecia_albicans.k141_1239476                         I 5 C 0
s Pithecia_chrysocephala.k141_785207                          5669  4 -     25401 --------------GC---------T-G
i Pithecia_chrysocephala.k141_785207                     I 5 C 0
s Pithecia_hirsuta.k141_640380                               31411  3 +     58159 --------------GC---------T--
i Pithecia_hirsuta.k141_640380                           I 5 C 0
s Pithecia_mittermeieri.k141_1280039                         31687  3 +     63561 --------------GC---------T--
i Pithecia_mittermeieri.k141_1280039                     I 5 C 0
s Pithecia_pissinattii.k141_878371                           31447  3 +     51148 --------------GC---------T--
i Pithecia_pissinattii.k141_878371                       I 5 C 0
s Pithecia_pithecia.tarseq_165                              556418  4 -   4542175 --------------GC---------T-G
i Pithecia_pithecia.tarseq_165                           I 5 C 0
s Pithecia_vanzolinii.k141_1369553                           31431  3 +     51125 --------------GC---------T--
i Pithecia_vanzolinii.k141_1369553                       I 5 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4586  8 -      8168 G-C---AGGA-C-T--------------
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7833 12 +     39866 T-C---AGCA-C-TGC---------T-G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          2917 12 -      9282 G-C---AGCA-C-TGC---------T-G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42321 12 -     87950 T-C---AGTA-C-TGC---------T-G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42715 12 -     88961 T-C---AGCA-C-TGC---------T-G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7413 12 -     39403 T-C---AGCA-C-TGC---------T-G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42364 12 +     87928 T-C---AGCA-C-TGC---------T-G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7410 12 -     60166 T-C---AGCA-C-TGC---------T-G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14347 12 -     67232 T-C---AGCA-C-TGC---------T-G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42263 12 -     90634 T-C---AGCA-C-TGC---------T-G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43730 12 +     89403 T-C---AGCA-C-TGC---------T-G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177652 12 - 189387572 A-C---AAGA-C-TGC---------T-G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192469 12 -   9816681 A-C---AAGA-C-TGC---------T-G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              27266 12 +     69807 A-A---CAGA-C-TGC---------T-G
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44452 12 -     80239 A-A---CAGA-C-TGC---------T-G
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982318 12 +   4620579 G-C---AGGA-C-TGC---------T-G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1565823 12 -   2598838 G-C---AGGA-C-TGC---------T-G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3461 12 -      7103 G-C---AGGA-C-TGC---------T-G
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4058 12 -     11706 G-C---AGGA-C-TGC---------T-G
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7796 12 -     30655 G-C---AGGA-C-TGC---------T-G
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34109 12 +     46564 G-C---AGGA-C-TGC---------T-G
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94388 12 -     98465 G-C---AGGA-C-TGC---------T-G
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8027 12 +     35169 G-C---AGGA-C-TGC---------T-G
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37163 20 +     52041 G-C---AGAA-A-TGCCA-AGCTGGT-G
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51877  8 -     66298 A-C---AGAA-C-T--------------
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4381  8 -     18639 G-C---AGGA-C-T--------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840569  8 -  28871421 T-C---AGGA-C-T--------------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537088  8 -   4952924 T-C---AGGA-C-T--------------
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18098838  8 +  38429054 G-C---AGAA-C-T--------------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26640 12 +     91421 A-A---CAGA-C-TGC---------T-G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153132 12 -   7812017 A-A---CAGA-C-TGC---------T-G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7507 12 +     72585 A-A---CAGA-C-TGC---------T-G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52905  8 +     55069 G-C---AGGA-T-T--------------
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022458 20 -  90668790 G-C---AGAA-C-TGCCA-AGCTCCT-G
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914460  8 +   3329780 G-C---TGGA-C-T--------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             1217 12 +      7119 A-A---CAGA-C-TGC---------T-G
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121825 12 + 195417433 A-A---CAGA-C-TGC---------T-G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236067 12 -   7961872 A-A---CAGA-C-TGC---------T-G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74499  8 -    116970 T-C---AGGA-C-T--------------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3718 12 +     27962 A-C---GAGA-C-TGC---------T-G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3613 12 +      6077 A-C---GAGA-C-TGC---------T-G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3703 12 +      5971 A-C---GAGA-C-TGC---------T-G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3624 12 +      5932 A-C---GAGA-C-TGC---------T-G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1966 12 -      4390 A-C---GAGA-C-TGC---------T-G
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391403 12 - 209938924 A-C---GAGA-C-TGC---------T-G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3573 12 +      5979 A-C---GAGA-C-TGC---------T-G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                142 12 -     22275 A-C---GAGA-C-TGC---------T-G
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7576  8 +     16473 G-C---AGGA-T-T--------------
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108740 12 + 121099817 A-C---AAGG-C-TGC---------T-G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30307 12 -     47369 A-C---AAGG-C-TGC---------T-G
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30693 12 -     79414 A-C---AAGG-C-TGC---------T-G
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27384 12 -     34454 A-C---AAGG-C-TGC---------T-G
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14787 12 -     22428 A-C---AAGG-C-TGC---------T-G
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29939 12 -     47109 A-C---AAGG-C-TGC---------T-G
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     237996 12 +   5703754 A-C---AAGA-C-TGC---------T-G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7586 12 +     21866 A-C---AAGA-C-TGC---------T-G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115643  8 +    313613 G-C---AGGA-C-T--------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         24959 12 +     27374 A-A---CAGA-C-TGC---------T-G
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28473 12 +     58920 A-A---CAGA-C-TGC---------T-G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14969 12 -     45317 A-A---CAGA-C-TGC---------T-G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22628 12 -     42441 A-A---CAGA-C-TGC---------T-G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25306 12 -     29113 A-A---CAGA-C-TGC---------T-G
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28380 12 -     48123 A-A---CAGA-C-TGC---------T-G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48939 20 +     77746 G-C---AGAA-C-TGTCT-GGCTGGT-A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857989  8 -   1910179 G-C---AGCA-C-T--------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671072  8 +  18376816 G-A---AGGA-C-T--------------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868078 12 +   3870691 G-C---AGGA-C-TGC---------T-G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6449  8 -     97271 G-C---AGGA-C-T--------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124610  8 +    196729 G-C---AGGA-C-T--------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643502  1 +  69701581 G---------------------------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390897 12 +   1523678 A-C---AAGA-C-TGC---------T-G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14054  8 +     22964 G-C---AGGA-C-T--------------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2427 12 +      5583 G-C---AGGA-T-GGT---------T-G
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191343  8 +    199430 G-C---AGGA-C-T--------------
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105313  8 -    539355 G-C---AGGA-C-T--------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 362  7 +      9917 G-C---AGGA-T----------------
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7152  7 +     20590 G-C---AGGA-T----------------
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352847 12 - 186847797 G-C---AAGA-C-TGC---------C-G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19525 11 -     31044 G-C---AGGA-C-C-C---------T-G
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479870  8 -    610378 A-C---AGGA-C-T--------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20505 12 +     26378 A-A---CAGA-C-TGC---------T-G
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33183 12 -     78344 A-A---CAGA-C-TGC---------T-G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19830 12 +     25722 A-A---CAGA-C-TGC---------T-G
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28135 12 -     62838 A-A---CAGA-C-TGC---------T-G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           28181 12 +     46913 A-A---CAGA-C-TGC---------T-G
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          8988 12 -     28527 A-A---CAGA-C-TGC---------T-G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30072 12 -     64340 A-A---CAGA-C-TGC---------T-G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28109 12 -     63452 A-A---CAGA-C-TGC---------T-G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9554 12 +     22490 A-A---CAGA-C-TGC---------T-G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         2980 12 -      6147 A-A---CAGA-C-TGC---------T-G
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9885 12 -     13050 A-A---CAGA-C-TGC---------T-G
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255125 12 -   6242583 A-A---CAGA-C-TGC---------T-G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1149 12 +     19340 A-A---CAGA-C-TGC---------T-G
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173189  8 -    200418 G-C---AGGA-G-T--------------
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480151 12 -  10818551 G-C---AGGT-C-TGC---------C-G
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833859 12 -   4065304 G-C---AGGG-T-GGC---------T-G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7879 12 -     70247 G-C---AGGA-T-GGC---------T-G
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361397  8 -  33153633 G-C---AGCA-C-T--------------
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3384  8 -     21056 G-C---AGAA-T-T--------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181550  8 +   5085361 G-C---AGGA-C-T--------------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24960 12 -     30710 G-C---AGGA-C-TGC---------T-G
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              23867 12 -    147434 G-C---AGGA-C-TGC---------T-G
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76031  8 +   5488506 G-T---AGGA-C-T--------------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104688  8 -    112863 G-C---AGGA-C-T--------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173869 12 -    224448 G-C---AGGA-C-TGT---------T-G
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28583  8 -     86975 G-C---AGGA-C-T--------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                       352 12 -       833 G-C---AAAA-C-TGG---------T-G
i Zapus_hudsonius.ZapHud_scaffold_501999                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             804  8 +      1812 G-C---AGGA-C-T--------------
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Dasypus_novemcinctus.JH564415.1                          2109797  0 -   2246927 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Ochotona_princeps.JH802162.1                             2550710 5994 -   3988456 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                184770  0 +    200668 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       5197 30 +     36723 GCCTGC-TG-ATCTTGT-TTAT-----CTT----GCC---T----T--T----T---------T
s Acinonyx_jubatus.LLWD01001279.1                           812588 27 +   1699592 ----GCCTG-ATCTTGT-TTAT-----CCT----CT----g---tt--a----c---------t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     24849 39 +     63021 GGCTGC-TG-ATCTTGT-TTAT-----CTTTTCTGT----T----T--T----TTTTTT---CT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415044 30 +  29979442 ----GC-TG-ATCTTGT-TTAT-----Cct----ct----g---tt--a----t-----aattt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215356 27 +    347723 ----GC-TG-ATCTTGT-TTat-----cct---gtt----a---tt--a----t---------t
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17807 32 -     61208 GGCTGC-TA-ATCTTGT-TTAT-----CCTGTCTGT----A----C--T----T----------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   47518 30 +     53615 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43496 30 +     44087 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16104 30 -     21945 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17787 30 +     32033 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71951 28 -     84148 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GT----C----C--G----C---------T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44190 28 -     78289 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GT----C----T--T----C---------T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43629 28 +     55831 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GT----C----T--T----C---------T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42079 28 -     64179 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GT----C----T--T----C---------T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23713 28 -     24835 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GT----C----T--T----C---------T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40704 28 +     45454 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GT----C----T--T----C---------T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46353 28 +     70886 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GT----C----T--T----C---------T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8526 28 +     30854 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GT----C----T--T----C---------T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32660 28 +     42133 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GT----C----T--T----C---------T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585031 29 +   2318259 ----GC-TG-ATCTTGT-TTAT-----TCT----cc----a----t--g----t-----tagtt
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 9
s Anoura_caudifer.AnoCau_scaffold_1412                      176839 16 -    412891 ----GC-TG--CTTCGT-TCAT-----CC-----------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 4
s Antilocapra_americana.AntAmePen_scaffold_21030             50145 18 -     68529 ----GC-TG-ATCTTGT-TTAT-----TCT----------------------------------
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 8
s Aotus_azarae.k141_887050                                     902 32 +     17741 G-CTGC-TG-GTCTTGT-TGAT-----CTT----GTC-AGC----TT-T----T---------T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1527 32 -     15923 G-CTGC-TG-GTCTTGT-TGAT-----CTT----GTC-AGC----TT-T----T---------T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671809 32 +   5030052 G-CTGC-TG-GTCTTGT-TGAT-----ctt----gtc-agc----t-tt----t---------t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               1802 33 -     16391 G-CTGC-TG-GTCTTGT-TGAT-----CTT----GTC-AGC----TTTT----T---------T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1362 32 -     17186 G-CTGC-TG-GTCTTGT-TGAT-----CTT----GTC-AGC----TT-T----T---------T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15722 22 -     32367 GGCTGC-TA-ATCTTGT-TTAG-----TCT----------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 13
s Arctocebus_calabarensis.k141_1364444                       19267 29 -     45910 ACCCAC-TG-CTCTTGC-TTAC-----CCT----GT----T----A--T----T---------T
i Arctocebus_calabarensis.k141_1364444                   C 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5112 24 -     15198 ----GC-TG--CTTTGT-TTAT-----CCT----GT----G----T--G----T---------T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274410 32 +  21539123 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTCCCGC----T--T----C---------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10577 31 +     48076 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTCC-GC----T--T----C---------T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5714 31 -     28759 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTCC-GC----T--T----C---------T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33267 32 +     44353 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTCCCGC----T--T----C---------T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48637 31 -     71267 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTCC-GC----T--T----C---------T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22696 32 -     33135 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTCCCAC----T--T----C---------T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  5938 20 +     11645 GGCTGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Avahi_laniger.k141_2756659                             C 0 I 6
s Avahi_peyrierasi.k141_1823318                               5946 20 -     19611 GGCTGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Avahi_peyrierasi.k141_1823318                          C 0 I 6
s Balaenoptera_acutorostrata.KI537508.1                    7956933 29 -  23207421 ----GT-TG-ATCTTGT-TTAT-----TCT----CT----G----T--G----t-----tactt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         4142 29 -      4711 ----GT-TG-ATCTTGT-TTAT-----TCT----CT----G----T--G----t-----tactt
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86040 29 +    124022 ----GC-TG-ATCTTGT-TTAT-----TCT----CC----A----T--G----TT-----AGTT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21572 29 +    288883 ----GC-TG-ATCTTGT-CTAT-----TCT----cc----a----t--g----t-----tagtt
i Bison_bison.KN261452.1                                 C 0 I 7
s Bos_indicus.CM003047.1                                  20355958 29 +  48749331 ----GC-TG-ATCTTGT-CTAT-----TCT----cc----a----t--g----t-----tagtt
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754526 29 +   1948126 ----GC-TG-ATCTTGT-CTAT-----TCT----Cc----a----t--g----t-----tagtt
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544665 29 -  45695690 ----GC-TG-ATCTTGT-CTAT-----TCT----cc----a----t--g----t-----tagtt
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529690 29 -   4408762 ----GC-TG-ATCTTGT-CTAT-----TCT----CC----a----t--g----t-----tagtt
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7580 29 +     28062 G-CTGC-TG-ATCTTGT-TCCT-----CTT----GTCC-GA----T--T---------------
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42874 29 -     91139 G-CTGC-TG-ATCTTGT-TCCT-----CTT----GTCC-GA----T--T---------------
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20400 29 +     95584 G-CTGC-TG-ATCTTGT-TCCT-----CTT----GTCC-GA----T--T---------------
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20313 29 +    119600 G-CTGC-TG-ATCTTGT-TCCT-----CTT----GTCC-GA----T--T---------------
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9883 31 +     18648 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-AC----T--T----T---------T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9417 32 -     13885 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----TT--------T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1488 31 -      8861 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-AC----T--T----T---------T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453881 31 + 189096842 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-AC----T--T----T---------T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1403 31 +      8664 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-AC----T--T----T---------T
i Callithrix_kuhlii.k119_102356                          C 0 I 1
s Camelus_bactrianus.KN276810.1                            7630705 20 +  17673402 ----GC-TG-ATCTTGT-TTAT-----TTT----GT----------------------------
i Camelus_bactrianus.KN276810.1                          C 0 I 8
s Camelus_dromedarius.KN272107.1                           4664991 20 +   7040546 ----GC-TG-ATCTTGT-TTAT-----TTT----GT----------------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 8
s Camelus_ferus.KB017975.1                                 1208651 20 +   1652518 ----GC-TG-ATCTTGT-TTAT-----TTT----GT----------------------------
i Camelus_ferus.KB017975.1                               C 0 I 8
s CanFam4.chr16                                           42505065 26 +  60362399 ----GC-TG-ATCTTGT-TTAT-----ACT----CT----C-T--T--A----T---------C
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8701 26 -     23171 ----GC-TG-ATCTTGT-TTAT-----ACT----CT----C-T--T--A----T---------C
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222044 26 +   9314153 ----GC-TG-ATCTTGT-TTAT-----act----ct----c---tt--a----t---------c
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615179 26 +  59632846 ----GC-TG-ATCTTGT-TTAT-----act----ct----c---tt--a----t---------c
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106760 26 -  63665305 ----GC-TG-ATCTTGT-TTAT-----act----ct----c---tt--a----t---------c
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408761 29 -  46296322 ----AC-TG-ATCTTGT-TTAT-----TCT----cc----a----t--g----t-----tagtt
i Capra_aegagrus.CM003241.1                              C 0 I 12
s Capra_hircus.CM004588.1                                 26591034 29 +  44709034 ----AC-TG-ATCTTGT-TTAT-----TCT----cc----a----t--g----t-----tagtt
i Capra_hircus.CM004588.1                                C 0 I 13
s Capromys_pilorides.CapPil_scaffold_652123                   1261 28 -      1880 GGCTGC-TG-ATCTTGT-TTAT-----TGT----GT----C----T--G----G----------
i Capromys_pilorides.CapPil_scaffold_652123              C 0 I 26
s Carlito_syrichta.NW_007259797.1                           270145 16 +    496798 ---TGC-TG-atcttat-ttat------------------------------------------
i Carlito_syrichta.NW_007259797.1                        C 0 I 9
s Carollia_perspicillata.CarPer_scaffold_1091333               309 24 +       553 ----GC-TG--CTGCGT-TTAT-----CCG----GG----C----T--G----T---------T
i Carollia_perspicillata.CarPer_scaffold_1091333         C 0 N 0
s Castor_canadensis.CasCan_scaffold_39952                    27387 26 -     39886 GGCTGC-TG-ATCTTGT-TTAT-----CCT----AT----T----T------------------
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79240 28 -    217609 -----C-TG-ATCTTGT-TTAT-----TCT----GT----G----T--T----TT-----ATTT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996117 28 +  23392119 GGCTGC-TG-ATCTTGT-TTAT-----CAT----GT----C----T--C----T----------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 16
s Cavia_porcellus.DS562891.1                               4999559 28 +  23407841 GGCTGC-TG-ATCTTGT-TTAT-----CAT----GT----G----T--C----T----------
i Cavia_porcellus.DS562891.1                             C 0 I 16
s Cavia_tschudii.CavTsc_scaffold_23560                       62640 28 -     66877 GGCTGC-TG-ATCTTGT-TTAT-----CAT----GT----G----T--C----T----------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 16
s Cebuella_niveiventris.k141_592277                           4801 31 -     12580 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-AC----T--T----T---------T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42859 31 +     53515 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-AC----T--T----T---------T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370790 30 -  26074798 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----T----------
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7679 30 -     34880 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----T----------
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66774 30 -     89041 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----T----------
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2109 16 -      5494 ---TGC-TG-ATCTTAT-TTAT------------------------------------------
i Cephalopachus_bancanus.k141_1689090                    C 0 I 9
s Ceratotherium_simum.JH767749.1                          15491877 25 -  27778364 ----GC-TG-ATACTGT-TTAT-----Cct----gt----c----t--g----t---------t
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18710 25 +     27315 ----GC-TG-ATACTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 1
s Cercocebus_atys.KQ010504.1                                140691 30 -   4669795 GATTGT-TG-ATCTTGT-Ttgt-----ctt----gcc---t----t--t----t---------t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44433 30 +     47900 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44257 30 -     44860 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44246 30 -    148725 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26433 30 -     40656 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6399 30 +     20796 GAATGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11516 30 -     17524 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27238 30 -     34525 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11019 30 -     25376 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363615 30 -  39242232 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269331 30 +  21565898 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31705 30 -     45857 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26604 30 -     32606 GATTGT-TA-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2763 30 +      8499 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25160 30 +     70610 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22130 30 +     36323 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12449 31 -     19938 TGCCGC-TG-AGCTGGT-GGAT-----CCC----GT----C----TCCG----T---------T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 1 C 0
s Cheirogaleus_major.k141_666340                             30314 20 -     33796 GGCCGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Cheirogaleus_major.k141_666340                         C 0 I 6
s Cheirogaleus_medius.k141_759766                             4831 20 -     15404 GGCCGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Cheirogaleus_medius.k141_759766                        C 0 I 6
s Cheracebus_lucifer.k141_2312002                             8677 29 -     32913 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTC-TGA----T--T---------------
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19090 29 -     40346 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTC-TGA----T--T---------------
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19345 29 +    216457 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTC-TGA----T--T---------------
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19138 29 +     39636 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTC-TGA----T--T---------------
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238485 28 -   2543920 TACTGC-TG-ATCTTGT-TTAC-----CTT----GT----C----T--G----T----------
i Chinchilla_lanigera.JH722012.1                         C 0 I 26
s Chiropotes_albinasus.k141_1946120                           3732 29 +      5346 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T---------------
i Chiropotes_albinasus.k141_1946120                      I 4 C 0
s Chiropotes_israelita.k141_313004                           42211 29 -    112038 G-CTGC-TG-ATCTTGT-TCCT-----CTT----GTCC-GA----T--T---------------
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7782 29 +     34062 G-CTGC-TG-ATCTTGT-TCCT-----CTT----GTCC-GA----T--T---------------
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343021 30 +  18827391 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9568 30 -     44032 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304345 30 - 135778131 GATTGT-TG-ATCTTGT-Ttgt-----ctt----gcc---t----t--t----t---------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14487 31 +     15858 AACTGC-TG-ATCTTGT-TTAT-----CTT----GC----C----TCAG----T---------T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 13
s Choloepus_hoffmanni.KN194906.1                            606063 31 -    839153 AGCTGC-TG-ATCTTGT-TTAT-----CTT----GC----c----tcag----t---------t
i Choloepus_hoffmanni.KN194906.1                         C 0 I 13
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                484 30 +      2406 -GCTGC-TG-CTCTTGT-TTAT-----CCT----GT--TTC----C--G----T---------T
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 I 13
s Colobus_angolensis.KN981557.1                             408770 30 -   2368649 GATTGT-TG-ATCTTGT-Ttgt-----ctt----gcc---t----t--t----t---------t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378646 30 - 200372422 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2195 30 -     84244 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806961 20 +  53390261 ----GC-TG-ATCTTGT-TTGT-----Cct----gt----------------------------
i Condylura_cristata.JH655891.1                          C 0 I 6
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2475 24 -      8242 ----GA-TG--CTTTGG-TTAT-----CCT----GT----T----T--G----T---------T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 10
s Cricetomys_gambianus.CriGam_scaffold_14425                 43987 38 -     83289 GGCTGC-GG-ATC-TGT-TTAT-----CTTGTCTCT----T----T--T----TTTTTTT---T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114556 39 - 224834208 GGCTGC-TG-ATCTTGT-Ttat-----cttgtctgt----g----t--g----t---gtgtttt
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9171 31 +     12657 ----GC-TTTTTCTTGT-TTATAGTCTATT----TT----C----T--T----T---------T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4035 26 +     87169 ----GC-TG-ATCTTGT-TTAT-----CCT----GT----T-T--T--G----T---------T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644697 29 -   1526836 GCCTGC-TG-ATTTTGT-TTAT-----CTT----GT----T----T--G----T---------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18061 25 +     50838 AGCTGC-TG-AT---GT-TTAC-----TGT----GT----C----T--G----G----------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 25
s Cuniculus_paca.CunPac_flattened_line_7025                   4030 28 +     36344 GGCTGC-TG-ATCTTGT-TTAT-----CTT----GT----C----T--G----T----------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 26
s Dasyprocta_punctata.DasPun_flattened_line_15900            27806 28 +     75252 GGCTGC-TA-ATCTTGC-TTAT-----CTT----GT----C----T--G----T----------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 26
s Dasypus_novemcinctus.JH564415.1                          2109797 30 -   2246927 -GCTGC-GG-GTCTCAT-TTGT-----CTT----GT----C----TCAG----T---------T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292249 29 +  12879189 GGCTAC-TG-ATCTGGT-TTAT-----CCC----AT----C----T--G----T---------T
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Delphinapterus_leucas.KZ290073.1                        18625465 29 -  35494412 ----GT-TG-ATCTTGT-TTAT-----TCt----gt----g----t--g----t-----tactt
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330152 24 -   2620052 ----GC-TG--CTTCAT-TTAT-----CCT----Gt----c----t--g----t---------t
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664162 23 -   1390856 ----GC-TG-ATACTGT-TTAT-----cct----gt----c----t--a---------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  138954 25 -    198055 ----GC-TG-ATACTGT-CTAT-----CCT----GT----C----T--G----T---------T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Dinomys_branickii.DinBra_scaffold_10381                    98571 28 -    115145 GGCTGC-TG-ATCCTGT-TTAT-----CTT----GT----C----T--G----T----------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 26
s Dipodomys_ordii.KN672350.1                              18950168 29 -  37912305 GGATGC-TG-ATCTTGT-Ttat-----cct----gc----t----t--t----c---------t
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5106 29 -     10735 GGATGC-TG-ATCTTGT-TTAT-----CCT----GC----T----T--T----C---------T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10066 28 +     14636 GACTGC-TG-ATCTTGT-TTAT-----CAT----GT----C----T--C----T----------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 26
s Echinops_telfairi.JH980293.1                            62854750 24 - 111700974 --------G-CTCTTGT-TTAT-----TCT----GT-TC-c----t--g----t---------t
i Echinops_telfairi.JH980293.1                           C 0 I 43
s Eidolon_helvum.AWHC01266696.1                               5938 24 +     19438 ----GC-TG--CATCGt-ttat-----cct----gt----t----t--t----c---------t
i Eidolon_helvum.AWHC01266696.1                          C 0 I 36
s Elaphurus_davidianus.JRFZ01104969.1                       239404 29 -    607251 ----GC-TG-ATCTTGT-TTAT-----TCT----cc----a----t--g----t-----tagtt
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108417 33 -  10337057 GGCTGC-TG-ATCCTGT-TTAT-----CCT----GT--TTc----c--at--ct---------t
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30705 37 +    110024 GGATGC-TG-ATCTTGT-TTat-----cttgtctgt----g----t--t----t-----ttttt
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12676 37 +     18970 GGATGC-TG-ATCTTGT-TTat-----cttgtctgt----g----t--t----t-----ttttt
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915786 26 +  41312741 ----GC-TG-ATCTTGT-TTAT-----CCt----ct----g---tt--a----c---------t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578587 24 +  14770903 ----GC-TG--CTTTGT-TTAC-----CCT----Gc----c----t--g----t---------t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041039 25 -   4378816 ----GC-CG-ATCTTGT-TTAT-----Cct----gt----c----t--g----t---------t
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               21374977 25 +  39960074 ----GC-CG-ATCTTGT-TTAT-----Cct----gt----c----t--g----t---------t
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.ATBW01110277.1                             358 25 -      1194 ----GC-CG-ATCTTGT-TTAT-----Cct----gt----c----t--g----t---------t
i Equus_przewalskii.ATBW01110277.1                       C 0 I 1
s Erinaceus_europaeus.JH835339.1                           3665745 25 +   7059049 ----at-tg-attttat-ttat-----cct----gt----c----t--t----t---------t
i Erinaceus_europaeus.JH835339.1                         C 0 I 1
s Erythrocebus_patas.Contig38                               262548 30 +  21539334 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64805 29 -    133382 ----GT-TG-ATCTTGT-TTAT-----TCT----CT----G----T--G----TT-----ACTT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             5024 29 +      7672 ----GT-TG-ATCTTGT-TTAT-----TCT----GT----G----T--G----TT-----ACTT
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14457 29 -     24895 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Eulemur_albifrons.k141_51491                           C 0 I 1
s Eulemur_collaris.k141_601111                               42166 29 -     70999 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Eulemur_collaris.k141_601111                           C 0 I 1
s Eulemur_coronatus.k141_384460                              86128 29 +    112731 GGTTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Eulemur_coronatus.k141_384460                          C 0 I 1
s Eulemur_flavifrons.k141_433119                             42697 29 +     68309 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Eulemur_flavifrons.k141_433119                         C 0 I 1
s Eulemur_fulvus.k141_636316                                 53023 29 -     65740 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Eulemur_fulvus.k141_636316                             C 0 I 1
s Eulemur_macaco.k141_1562045                                23652 29 -     75513 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Eulemur_macaco.k141_1562045                            C 0 I 1
s Eulemur_mongoz.k141_232305                                 47850 29 -     97555 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Eulemur_mongoz.k141_232305                             C 0 I 1
s Eulemur_rubriventer.k141_1423786                            4574 29 +     30972 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Eulemur_rubriventer.k141_1423786                       C 0 I 1
s Eulemur_rufus.k141_514691                                  42294 29 -     52037 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GA----C----T--G----T---------T
i Eulemur_rufus.k141_514691                              C 0 I 1
s Eulemur_sanfordi.k141_1122526                              58696 29 -    111500 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Eulemur_sanfordi.k141_1122526                          C 0 I 1
s Felis_catus.CM001381.2                                 186246497 27 - 206538554 ----GCCTG-ATCTTGT-TTAT-----Cct----ct----g---tt--a----c---------t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116283 27 - 205367284 ----GCCTG-ATCTTGT-TTAT-----Cct----ct----g---tt--a----c---------t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27380 27 -     30238 ----GCCTG-ATCTTGT-TTAT-----CCT----TT----G-T--T--A----C---------T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916106 28 -   3816255 GGCTGC-TG-ATCTTGT-TTAT-----ATT----AT----C----T--G----T----------
i Fukomys_damarensis.KN121974.1                          C 0 I 26
s Galago_moholi.ctg3793                                     124696 29 -    137831 GCCCAC-CA-CTCTTGC-TTAT-----CCT----GT----T----A--T----T---------T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8241 29 +     22493 GCCCAC-CA-CTCTTGC-TTAT-----CCT----GT----T----A--T----T---------T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20318 27 -     32986 GCCCAC-CA-CTCTTGC-TTGT-----CCT----GT----A----A--G---------------
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 849 34 -     28519 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GC-C--TGTTAT--T----T---------T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91108 29 -     95226 ----GC-TG-ATCTTGT-TTAT-----TCT----Cc----a----t--g----t-----tagtt
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 3
s Glis_glis.GliGli_scaffold_33859                            34179 23 -     36801 GGATGC-TG-ATCTTGT-TTAT-----CCT----G-----------------------------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 3
s Gorilla_beringei.k141_3358147                               5497 30 -      8343 GCCTGC-TG-ATCTTGT-TTAT-----CTT----GCC---T----T--T----T---------T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254511 30 - 186649187 GCCTGC-TG-ATCTTGt-ttat-----ctt----gcc---t----t--t----t---------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1672 23 -     78134 GACTGC-TG-ATCTTGT-TTAT-----CCT----G-----------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Hapalemur_alaotrensis.k141_330369                          14382 29 -     40692 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Hapalemur_alaotrensis.k141_330369                      C 0 I 1
s Hapalemur_gilberti.k141_646465                             35784 29 +     49394 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Hapalemur_gilberti.k141_646465                         C 0 I 1
s Hapalemur_griseus.k141_763500                              60652 29 -     66874 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Hapalemur_griseus.k141_763500                          C 0 I 1
s Hapalemur_meridionalis.k141_258450                          9526 29 -     42923 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Hapalemur_meridionalis.k141_258450                     C 0 I 1
s Hapalemur_occidentalis.k141_578367                         16526 29 -     53142 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Hapalemur_occidentalis.k141_578367                     C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585                30464 21 -    327341 ----GC-TG-ATCTTGT-TTAT-----CCT----GT----C-----------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8790 24 +     48891 ----GC-TG-ATCTTTT-TTAT-----TCT----CC----A----T--G----T----------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 15
s Heterocephalus_glaber.JH602082.1                         1932073 28 -  22651954 TCCTAC-TG-ATCTTGT-TTAT-----CTT----AT----T----T--G----T----------
i Heterocephalus_glaber.JH602082.1                       C 0 I 26
s Heterohyrax_brucei.HetBruBak_scaffold_870725                 184 32 -       322 GGCTGC-TG-ATCTTGT-TTAT-----CCT----AT----T----T--T-GGGA---------A
i Heterohyrax_brucei.HetBruBak_scaffold_870725           C 0 N 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7310 29 -     36432 ----GC-TG-ATCTTGT-TTAT-----TCT----GT----G----T--G----TT-----AGTT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553836 25 -   1711038 ----GC-TG--CTTTGT-TTAT-----CCT----gt----c---ct--g----t---------t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                760 25 -      2730 ----GC-TG--CTTTGT-TTAT-----CCT----GT----C---CT--G----T---------T
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 7
s Hoolock_leuconedys.ctg274                                    142520 31 -    630532 GTCTTC-TG-ATCTTGT-TTAT-----CTT----GCC---T----T--T----TT--------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69377 26 +     83186 ----GC-TG-ATCTTGT-TTAT-----CTT----CT----G-T--T--T----T---------T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71545 27 +    143317 G-CTGC-TG-ATCTTGT-TTAT-----TGT----GT----C----T--C----T----------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 25
s Hylobates_agilis.k141_1155965                               5555 30 +     12352 GCCTTC-TG-ATCTTGT-TTAT-----CTT----GCC---T----T--T----T---------T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12739 30 +     55766 GCCTTC-TG-ATCTTGT-TTAT-----CTT----GCC---T----T--T----T---------T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052337 32 + 191637585 GCCTTC-TG-ATCTTGT-TTAT-----CTT----GCC---T-TT-T--T----T---------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801215 32 +  11177569 GCCTTC-TG-ATCTTGT-TTAT-----CTT----GCC---T-TT-T--T----T---------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4170 28 -    135385 GGTTGC-TG-ATCTTCT-TTAT-----CTT----GT----C----C--G----T----------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386511 35 +   7955117 CGCTGC-TG-ATCGTGC-Tcag-----tct----gt----t--tat--ttattt---------a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2086 20 +     11955 GGCTGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Indri_indri.k141_2415743                               C 0 I 6
s Inia_geoffrensis.IniGeo_flattened_line_69447                3282 29 -     16823 ----GT-TG-ATCTTGT-TTAT-----TCT----GT----G----T--G----TT-----ACTT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1239512 32 +   9596543 TGCTGC-TA-ATCTTGT-TTAT-----CCTGTCTGC----A----C--T----T----------
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_3970                 65524 18 -     97402 ----GT-TG-ATCTTGT-TTAT-----TCT----------------------------------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 9
s Lagothrix_lagothricha.k141_246028                          42954 31 +    110728 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTCC-GC----T--T----C---------T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62582 25 -     65777 ----GCTTG--CTTTGT-TTAC-----CCT----GC----C----T--G----T---------T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 147
s Lemur_catta.scaffold_24                                 14759175 29 +  30322482 GGCTGC-TG-GTCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Lemur_catta.scaffold_24                                C 0 I 1
s Leontocebus_fuscicollis.k141_2994775                        3867 31 -     13097 G-CTGC-TG-ATCTTGT-TTAC-----CTT----GTCC-GC----T--T----T---------T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3621 31 +      5940 G-CTGC-TG-ATCTTGT-TTAC-----CTT----GTCC-GC----T--T----T---------T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3451 31 -      5717 G-CTGC-TG-ATCTTGT-TTAC-----CTT----GTCC-GC----T--T----T---------T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9827 31 -     11567 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----T---------T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11208 31 -     12945 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----T---------T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8690 20 +     29618 GGCTGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Lepilemur_ankaranensis.k141_567626                     C 0 I 6
s Lepilemur_dorsalis.k141_387009                              8686 20 +     31569 GGCTGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Lepilemur_dorsalis.k141_387009                         C 0 I 6
s Lepilemur_ruficaudatus.k141_330196                          8696 20 +     24756 GGCTGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 6
s Lepilemur_septentrionalis.k141_360456                       8696 20 +     16388 GGCTGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Lepilemur_septentrionalis.k141_360456                  C 0 I 6
s Leptonychotes_weddellii.KB714746.1                        813197 20 -   3914936 ----GC-TG-ATCTTGT-TTAT-----CCT----cc----------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 6
s Lepus_americanus.LepAme_scaffold_56121                     17554 24 +     24238 AACTGC-TG-ATCTTGT-TTAT-----CTT----CC----------------------------
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 1
s Lipotes_vexillifer.KE559953.1                             334810 29 +    662738 ----GT-TG-ATCTTGT-TTAT-----TCt----gt----g----t--g----t-----tactt
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333576 30 -   1826925 GATTGT-TC-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10275 29 +     19643 GCCCAC-CA-CTTGTGC-TTAT-----CCT----GT----T----A--T----T---------T
i Loris_lydekkerianus.k141_2031736                       C 0 I 4
s Loris_tardigradus.ctg83                                  5043938 29 -   6120653 GCCCAC-CA-CTTGTGC-TTAT-----CCT----GT----T----A--T----T---------T
i Loris_tardigradus.ctg83                                C 0 I 4
s Loxodonta_africana.GL010049.1                           39080703 32 +  43346337 GGCTGC-TG-ATTTTGT-TTAC-----CCT----GT----T----t--c-agga---------a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614334 26 +  59628241 ----GC-TG-ATCTTGT-TTAT-----act----ct----c---tt--a----t---------c
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              44970 30 -     61512 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372632 30 -  60120075 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24895 30 +     30207 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           21998 30 -     24934 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24848 30 +     30527 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36024 30 -     50087 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45768 30 +     51645 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                414970 30 - 187317192 GATTGT-TG-ATCTTGT-Ttgt-----ctt----gcc---t----t--t----t---------t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399201 30 +  25927173 GATTGT-TG-ATCTTGT-Ttgt-----ctt----gcc---t----t--t----t---------t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48373 30 -     62418 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  911 30 +     14901 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44845 30 +     59329 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270753 30 +    668171 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                 1029 30 +      1732 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2551 30 +     17132 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222889 24 -    270270 ----GC-TA--CATTGT-TTAT-----TCT----GT----C----T--G----C---------T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322040 30 +  24302211 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356871 30 -    752769 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673243 21 -    737560 ----GC-TG-ATCTTGT-TTat-----cct----gt----c-----------------------
i Manis_javanica.JSZB01003497.1                          C 0 I 54
s Manis_pentadactyla.KN006162.1                             220531 21 +    317179 ----GC-TG-ATCTTGT-TTat-----cct----gt----c-----------------------
i Manis_pentadactyla.KN006162.1                          C 0 I 3
s Marmota_marmota.CZRN01000018.1                           7500731 35 +  40650429 CGCTGC-TG-ATCGTGC-Tcag-----tct----gt----t--tat--ttattt---------a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150080 25 +    207569 ----GC-TG--CTTGGTTTTAT-----TCT----GT----T----A--C----T---------T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25886 24 -     74585 ----AC-TG-AT--TGT-TTAT-----CCT----CT----G---CT--A----T---------T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 49841 42 -    140813 GGCTGC-TG-ATCTTGT-TTAC-----CTTGTCTTT----T----T--T----ATTTTTTATTT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428940 41 +  29670104 GGCTGC-TG-ATCTTGT-TTAt-----cttgtctct----g----t--gt--gc---atgtttc
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     81109 29 +     93471 ----GT-TG-ATCTTGT-TCAT-----TCT----GT----G----T--G----TT-----ACTT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                 9992 31 +     17804 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-AC----T--T----T---------T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10494 31 -     12984 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-AC----T--T----T---------T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18808 31 -     26561 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-AC----T--T----T---------T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984298 20 +  93316391 GGCTGC-TG-ATCTTGT-TTat-----c------------------------------------
i Microcebus_murinus.CM007674.1                          C 0 I 6
s Microgale_talazaci.MicTal_scaffold_6613                    45839 30 +    145209 -GCTGC-TG-ATCTTGC-TTAT-----TCT----GT--TTC----T--G----T---------T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184770 17 +    200668 --------------CAT-TTAT-----CCT----GT----C----T--G----T---------T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962142 39 +  27267610 GGATGC-TG-ATCTTGT-TTat-----cttgtctgt----g----t--t----t---ttttttt
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362937 24 -   8254450 ----GC-TG--CTTTGT-TTAT-----CCT----Gt----c----t--g----t---------t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 3
s Miniopterus_schreibersii.MinSch_scaffold_23309             41844 24 -     48117 ----GC-TG--CTTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 3
s Miopithecus_ogouensis.k141_1534655                         22057 30 -     27822 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8204 26 +     27589 ----GC-TG-ATCTTGT-TTAT-----CCT----CC----G-T--T--A----T---------T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52094 20 -     62432 GGCTGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Mirza_zaza.k141_766280                                 C 0 I 6
s Monodon_monoceros.MonMon_M_scaffold_103                   353208 29 +    437263 ----GT-TG-ATCTTGT-TTAT-----TCT----GT----G----T--G----TT-----ACTT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 178987 25 +    366855 ----GC-TG--CTTTGT-TTAT-----CCT----GT----C-T--T--G----T---------T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25226 29 -     82753 ----GC-TG-ATCTTGT-TTAT-----TCT----CC----A----T--G----TT-----AGTT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18215 21 -     63510 ----GC-TG-ATCTTGT-TTAT-----CCT----GT----T-----------------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 2
s Murina_feae.MurFea_scaffold_17764                          38904 23 +     47283 ----GC-TG--CTCTGT-TTAC-----CCT----GT----C----T--G----T----------
i Murina_feae.MurFea_scaffold_17764                      C 0 I 1
s Mus_caroli.LT608237.1                                   35592871 32 + 120012414 GCCTGC-TG-ATCTTGT-Ttat-----cttgtctgt----t----t--t----t----------
i Mus_caroli.LT608237.1                                  C 0 I 6
s Mus_musculus.chr8                                       41687256 32 + 129401213 GGCTGC-TG-Atcttgt-ttat-----cttgtctgt----t----t--t----t----------
i Mus_musculus.chr8                                      C 0 I 7
s Mus_spretus.CM004101.1                                  39496552 31 + 130317789 GGCTGC-TG-ATCTTGT-Ttat-----cttgtctgt----t----t--t---------------
i Mus_spretus.CM004101.1                                 C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_12866             83008 23 -     86153 GGCTGC-TG-ATCTTGT-TTAT-----CTT----G-----------------------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 14
s Mustela_putorius.JH418006.1                             14354819 26 +  14710649 ----GC-TG-TTCTTGT-TTAt-----cct----ct----g---tt--a----t---------t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     62842 26 +     67721 GGCTGT-TG-ATCTTGT-TTAT-----TG------T----C----T--G----G----------
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 26
s Myotis_brandtii.KE162005.1                               9793190 24 +  10118263 ----GC-TG--CTTTGT-TTAC-----CCT----Gc----c----t--g----t---------t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387320 24 +   6019432 ----GC-TG--CTTTGT-TTAC-----CCT----Gc----c----t--g----t---------t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383147 24 +   4330536 ----GC-TG--CTTTGT-TTAC-----CCT----Gc----c----t--g----t---------t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1956 24 +     18357 ----GC-TG--CTTTGT-TTAC-----CCT----GC----C----T--G----T---------T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119449 31 +    130748 GGTTGC-TG-ACTTTGT-TTAT-----CTT----GC----C----TCAG----C---------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 9
s Nannospalax_galili.KL204047.1                             946000 32 +   3037898 GGCTGC-tg-atcttgt-ttat-----cttgtcTGT----G----A--T----G----------
i Nannospalax_galili.KL204047.1                          C 0 I 10
s Nasalis_larvatus.k141_1350636                              28695 30 +     34575 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1227378 29 -   7148211 ----GT-TG-ATCTTGT-TTAT-----TCt----gt----g----t--g----t-----tactt
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127924 24 -    149072 ----GC-TA--TTTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53448 26 -    132029 GCCTTC-TG-ATCTTGT-TTAT-----CTT----GCC---T-----------------------
i Nomascus_annamensis.k141_1771965                       C 0 I 3
s Nomascus_concolor.k141_735679                               9543 26 -     16345 GCCTTC-TG-ATCTTGT-TTAT-----CTT----GCC---T-----------------------
i Nomascus_concolor.k141_735679                          C 0 I 3
s Nomascus_gabriellae.k141_57920                             15428 26 +     22201 GCCTTC-TG-ATCTTGT-TTAT-----CTT----GCC---T-----------------------
i Nomascus_gabriellae.k141_57920                         C 0 I 3
s Nomascus_siki_b.tarseq_93                            8413649 26 -  22158432 GCCTTC-TG-ATCTTGT-TTAT-----CTT----GCC---T-----------------------
i Nomascus_siki_b.tarseq_93                          C 0 I 3
s Nomascus_siki_a.k141_941534                                  25826 26 -     54323 GCCTTC-TG-ATCTTGT-TTAT-----CTT----GCC---T-----------------------
i Nomascus_siki_a.k141_941534                              C 0 I 3
s Nyctereutes_procyonoides.CAJHUB010000658.1                197928 26 +   9404916 ----GC-TG-ATCTTGT-TTAT-----cct----ct----c---tt--a----t---------c
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636297 29 + 196305487 GCCCAC-CA-CTCGTGC-TTAT-----CCT----GT----T----A--T----T---------T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3051 29 -      3937 GCCCAC-CA-CTCGTGC-TTAT-----CCT----GT----T----A--T----T---------T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564556 29 - 199412804 GCCCAC-CA-CTCGTGC-TTAT-----CCT----GT----T----A--T----T---------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11054794 28 -  11899542 AGCTGC-TG-ATCTTGT-TTAT-----TGT----GT----C----T--G----G----------
i Octodon_degus.JH651603.1                               C 0 I 26
s Odobenus_rosmarus.KB229312.1                             1451396 26 +   2017862 ----GC-TG-ATCTCAT-TTAT-----CCt----cc----g---tt--a----t---------t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         435994 29 -    630418 ----GC-TG-ATCTTGT-TTAT-----TCT----cc----a----t--g----t-----tagtt
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          13991 29 +    150152 ----GC-TG-ATCTTGT-TTAT-----TCC----Cc----a----t--g----t-----tagtt
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 3
s Ondatra_zibethicus.OndZib_scaffold_7387                    92498 40 -    140218 GGATGC-TG-ATCTTGT-TTAT-----CTTGTCTGT----G----T--T----TTTTTTT-T-T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3378 41 -     41509 GGCTGC-TA-ATCTTGT-TTAT-----CTTGTCTGT----G----T--T----TTTTTTT-TTC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096660 29 +  10937097 ----GT-TG-ATCTTGT-TTAT-----TCt----gt----g----t--g----t-----tactt
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13547 21 -     14239 CGCTGA-GT-ATCTTGT-TTAT-----TC-----------------------------------
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 I 2
s Oryctolagus_cuniculus.CM000791.1                       107103347 24 - 174332312 AACTGC-TG-ATCTTGT-TTAg-----ctt----cc----------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                        38974 26 +    559221 ----GC-TG-ATCTTGT-TTAT-----Cct----ct----g---tt--a----t---------c
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        39858 29 -     51505 GCCCAC-CA-CTCTTGC-TTAT-----CCT----GT----T----A--T----T---------T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352860 29 +   1103335 GCCCAC-CA-CTCTTGC-TTat-----cct----gt----t----a--t----t---------t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403911 29 -  44047080 ----gc-tg-atctttt-tttt-----tct----cc----c----t--g----t-----ttgtt
i Ovis_aries.CM001607.2                                  C 0 I 9
s Ovis_canadensis.OviCan_scaffold_67953                       4430 29 +     17875 ----GC-TG-ATCTTTT-TTAT-----TCT----CC----A----T--G----TT-----AGTT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 9
s Pan_troglodytes.CM009242.2                               1472540 30 - 189151597 GCCTGC-TG-ATCTTGt-ttat-----ctt----gcc---t----t--t----t---------t
i Pan_troglodytes.CM009242.2                             I 12 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24203 27 -    230217 ----GCCTG-ATCTTGT-TTAT-----CCT----CT----G-T--T--A----C---------T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461529 27 -  18783137 ----GCCTG-ATCTTGT-TTAT-----Cct----ct----g---tt--a----c---------t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972188 27 +   8748460 ----GCCTG-ATCTTGT-TTAT-----Cct----ct----g---tt--a----c---------t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615426 29 +   2937107 ----GC-TG-ATCTTGT-TTAT-----TCT----cc----a----t--g----t-----tagtt
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242873 30 - 183742232 GATTGT-TG-ATCTTGT-Ttgt-----ctt----gcc---t----t--t----t---------t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9335 30 +     21308 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291908 30 -  20919399 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Papio_hamadryas.Contig39                               I 1534 C 0
s Papio_kindae.k141_2214839                                  21983 30 -     27687 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15129 30 +     16796 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21940 30 -     23640 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14796 26 +     78924 ----GC-TG-ATCTTGT-TTAT-----CCT----GT----T---AT--T----T---------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 2
s Perodicticus_ibeanus.k141_1921260                          26059 26 +     31479 GCCCAC-CG-CTCTTGC-TTAT-----CCT----GT----T----A------------------
i Perodicticus_ibeanus.k141_1921260                      C 0 I 5
s Perodicticus_potto.k141_1854441                            18429 26 -     24908 GCCCAC-CG-ATCTTGC-TTAT-----CCT----GT----T----A------------------
i Perodicticus_potto.k141_1854441                        C 0 I 5
s Perognathus_longimembris.PerPac_flattened_line_89005        1504 29 +      9367 GGATGC-TG-ATCTTGT-TTAT-----CCT----GT----T----T--T----C---------T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246577 41 +  18517816 GGCTGC-TA-ATCTTGT-TTAT-----Cttgtctgt----g----g--t----t-ttttttttt
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31676 27 -     56120 G-CTGC-TC-GTCTTGT-TTAT-----CCG----GT----C----T--C----T----------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 25
s Phocoena_phocoena.PhoPho_flattened_line_46867              12504 29 -     15039 ----GT-TG-ATCTTGT-TTAT-----TCT----GT----G----T--G----TT-----ACTT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2153 30 +     55023 GATTGT-TG-ATCTTGT-TTGT-----CTT----GGC---T----T--T----T---------T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1703 30 -     89929 GATTGT-TG-ATCTTGT-TTGT-----CTT----GGC---T----T--T----T---------T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2292 30 +     40849 GATTGT-TG-ATCTTGT-TTGT-----CTT----GGC---T----T--T----T---------T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253956 30 +  14605196 GATTGT-TG-ATCTTGT-TTgt-----ctt----ggc---t----t--t----t---------t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3494 24 +     22231 ----GC-TG--CTTTGT-TTAC-----CCT----GC----C----T--G----T---------T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64578 29 +    207309 G-CTGC-TG-GTCTTGT-TCAT-----CTT----GTCC-GA----T--T---------------
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5673 29 -     25401 G-CTGC-TG-GTCTTGT-TCAT-----CTT----GTCC-GA----T--T---------------
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31414 29 +     58159 G-CTGC-TG-GTCTTGT-TCAT-----CTT----GTCC-GA----T--T---------------
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31690 29 +     63561 G-CTGC-TG-GTCTTGT-TCAT-----CTT----GTCC-GA----T--T---------------
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31450 29 +     51148 G-CTGC-TG-GTCTTGT-TCAT-----CTT----GTCC-GA----T--T---------------
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556422 29 -   4542175 G-CTGC-TG-GTCTTGT-TCAT-----CTT----GTCC-GA----T--T---------------
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31434 29 +     51125 G-CTGC-TG-GTCTTGT-TCAT-----CTT----GTCC-GA----T--T---------------
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4594 29 -      8168 ----GT-TG-ATCTTGT-TTAT-----TCT----GT----G----T--G----TT-----ACAT
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7845 29 +     39866 G-CTGC-TG-ATCTTGT-TCGT-----CTT----GTC-TGA----T--T---------------
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 3
s Plecturocebus_brunneus.k141_862875                          2929 29 -      9282 G-CTGT-TG-ATCTTCT-TCAT-----CTT----GTC-TGA----T--T---------------
i Plecturocebus_brunneus.k141_862875                     C 0 I 3
s Plecturocebus_caligatus.k141_1382851                       42333 29 -     87950 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTC-TGA----T--T---------------
i Plecturocebus_caligatus.k141_1382851                   C 0 I 3
s Plecturocebus_cinerascens.k141_1164729                     42727 29 -     88961 G-CTGC-TG-ATCTTCT-TCAT-----CTT----GTC-TGA----T--T---------------
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 3
s Plecturocebus_cupreus.k141_2351393                          7425 29 -     39403 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTC-TGA----T--T---------------
i Plecturocebus_cupreus.k141_2351393                     C 0 I 3
s Plecturocebus_dubius.k141_1058799                          42376 29 +     87928 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTC-TGA----T--T---------------
i Plecturocebus_dubius.k141_1058799                      C 0 I 3
s Plecturocebus_grovesi.k141_2013005                          7422 29 -     60166 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTC-TGA----T--T---------------
i Plecturocebus_grovesi.k141_2013005                     C 0 I 3
s Plecturocebus_hoffmannsi.k141_3303950                      14359 29 -     67232 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTC-TGA----T--T---------------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 3
s Plecturocebus_miltoni.k141_349282                          42275 29 -     90634 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTC-TGA----T--T---------------
i Plecturocebus_miltoni.k141_349282                      C 0 I 3
s Plecturocebus_moloch.k141_1031110                          43742 29 +     89403 G-CTGC-TG-ATCTTGT-TCAT-----CTT----GTC-TGA----T--T---------------
i Plecturocebus_moloch.k141_1031110                      C 0 I 3
s Pongo_abelii.CM009266.2                                   177664 24 - 189387572 GCCTGC-TG-ATCTTgt-ttat-----ctt----gc----------------------------
i Pongo_abelii.CM009266.2                                C 0 I 3
s Pongo_pygmaeus.ctg66                                      192481 24 -   9816681 GCCTGC-TG-ATCTTGT-TTAT-----CTT----GC----------------------------
i Pongo_pygmaeus.ctg66                                   C 0 I 3
s Presbytis_comata.k141_1230337                              27278 30 +     69807 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44464 30 -     80239 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982330 29 +   4620579 GGCTGT-TG-ATCTTGT-TTAT-----CCt----gt----c----t--g----t---------t
i Prolemur_simus.MPIZ01000396.1                          C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                    1565835 20 -   2598838 GGCTGC-TG-ATCTTGT-TTat-----c------------------------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 6
s Propithecus_coronatus.k141_209299                           3473 20 -      7103 GGCTGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Propithecus_coronatus.k141_209299                      C 0 I 6
s Propithecus_diadema.k141_153680                             4070 20 -     11706 GGCTGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Propithecus_diadema.k141_153680                        C 0 I 6
s Propithecus_edwardsi.k141_635656                            7808 20 -     30655 GGCTGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Propithecus_edwardsi.k141_635656                       C 0 I 6
s Propithecus_perrieri.k141_1496898                          34121 20 +     46564 GGCTGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Propithecus_perrieri.k141_1496898                      C 0 I 6
s Propithecus_tattersalli.k141_1127767                       94400 20 -     98465 GGCTGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Propithecus_tattersalli.k141_1127767                   C 0 I 6
s Propithecus_verreauxi.k141_1047036                          8039 20 +     35169 GGCTGC-TG-ATCTTGT-TTAT-----C------------------------------------
i Propithecus_verreauxi.k141_1047036                     C 0 I 6
s Psammomys_obesus.NESX01036366.1                            37183 43 +     52041 GGCTGC-TG-ATCTTgt-ttat-----cttgtcttt---tt----t--t----attttttattt
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51885 24 -     66298 ----GC-TG--CTTCTT-TTGA-----CTG----gt----c----t--g----t---------t
i Pteronotus_parnellii.KE847780.1                        C 0 I 13
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4389 26 -     18639 ----GC-TG-ATCTTGT-TTAT-----CCT----CT----G-T--T--A----T---------T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840577 24 -  28871421 ----GC-TG--CATTGC-TTAT-----cct----gt----c----t--g----c---------t
i Pteropus_alecto.KB030862.1                             C 0 I 5
s Pteropus_vampyrus.KN525825.1                             3537096 24 -   4952924 ----GC-TG--CATTGC-TTAT-----Cct----gt----c----t--g----c---------t
i Pteropus_vampyrus.KN525825.1                           C 0 I 5
s Puma_concolor.QAVW01001104.1                            18098846 27 +  38429054 ----GCCTG-ATCTTGT-TTAT-----Cct----ct----g---tt--a----c---------t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26652 30 +     91421 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153144 30 -   7812017 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7519 30 +     72585 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52913 29 +     55069 ----GC-TG-ATCTTGT-TTAT-----TCT----CC----A----T--G----TT-----AGTT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022478 32 -  90668790 GGCTGC-TG-ATCTTGT-TTAT-----Cttgtctgg----t----t--t----t----------
i Rattus_norvegicus.chr16                                C 0 I 4
s Rhinolophus_sinicus.LVEH01000134.1                       2914468 24 +   3329780 ----GC-TG--CTTTGT-TTAT-----CCt----gt----c----t--g----t---------t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             1229 26 +      7119 CATTGT-TG-ATC-----TTGT-----CTT----GCC---T----T--T----T---------T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121837 26 + 195417433 CATTGT-TG-ATC-----Ttgt-----ctt----gcc---t----t--t----t---------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236079 26 -   7961872 CATTGT-TG-ATC-----TTGT-----CTT----GCC---T----T--T----T---------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74507 24 -    116970 ----GC-TA--CATTGT-ATAT-----CCT----GT----C----T--G----C---------C
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 5
s Saguinus_bicolor.k141_1429097                               3730 31 +     27962 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----T---------T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3625 31 +      6077 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----T---------T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3715 31 +      5971 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----T---------T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3636 31 +      5932 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----T---------T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              1978 31 -      4390 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----T---------T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391415 31 - 209938924 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----T---------T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3585 31 +      5979 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----T---------T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                154 31 -     22275 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----T---------T
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7584 29 +     16473 ----GC-TC-ATCTTAT-TTAT-----TCT----CC----A----T--G----TT-----AGTT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108752 31 + 121099817 G-CCGC-TG-ATCTTGT-TTAT-----Ctt----gtc-tgc----t--t----t---------c
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30319 31 -     47369 G-CCGC-TG-ATCTTGT-TTAT-----CTT----GTC-TGC----T--T----T---------C
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30705 31 -     79414 G-CCGC-TG-ATCTTGT-TTAT-----CTT----GTC-TGC----T--T----T---------C
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27396 31 -     34454 G-CCGC-TG-ATCTTGT-TTAT-----CTT----GTC-TGC----T--T----T---------C
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14799 31 -     22428 G-CCGC-TG-ATCTTGT-TTAT-----CTT----GTC-TGC----T--T----T---------C
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29951 31 -     47109 G-CCGC-TG-ATCTTGT-TTAT-----CTT----GTC-TGC----T--T----T---------C
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238008 30 +   5703754 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----T----------
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7598 30 +     21866 G-CTGC-TG-ATCTTGT-TTAT-----CTT----GTCC-GC----T--T----T----------
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115651 20 +    313613 ----GC-TG-ATCTTGT-TTAT-----CCT----GT----------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 7
s Semnopithecus_entellus.k141_158471                         24971 30 +     27374 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28485 30 +     58920 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           14981 30 -     45317 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22640 30 -     42441 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25318 30 -     29113 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28392 30 -     48123 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48959 39 +     77746 GGCTGC-TG-ATCTTGT-TTAT-----CTTGTCTGT----T----T--T----TTTTTT---CT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1857997 25 -   1910179 ----GC-TG-ATCTTGT-TTAT-----CTT----GT----C----T--G----T---------T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671080 11 +  18376816 ----GC-Tg-atcttat-----------------------------------------------
i Sorex_araneus.JH798187.1                               C 0 I 10
s Spermophilus_dauricus.KZ294078.1                         1868090 35 +   3870691 CGCTGC-TG-ATCGTGC-TCAg-----tct----gt----t--tgt--ttcttt---------a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6457 26 -     97271 ----GC-TG-ATCTTGT-TTAT-----CTT----CT----G-T--T--A----T---------T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124618 21 +    196729 ----GC-TG-ATCTTAT-TTAG-----CCT----GT----C-----------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                    6643503 28 +  69701581 -----C-TA-ATCTTGT-TTAT-----TCT----CT----g----t--g----t-----cagtt
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390909 30 +   1523678 GCCTGC-TG-ATCTTGT-TTAT-----CTT----GCC---T----T--T----T---------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14062 24 +     22964 ----GA-TG--CTTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2439 29 +      5583 GGTTGC-TG-GC--TGT-TTAT-----CTT----GC----C----TCAG----C---------T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191351 25 +    199430 ----GC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    105321 25 -    539355 ----GT-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_1733899                                 369 29 +      9917 ---TGC-TG-ATCTTAT-TTAT-----CCT----GTC---TGT--T--T----T---------C
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7159 29 +     20590 ---TGC-TG-ATCTTAT-TTAT-----CCT----GTC---TGT--T--T----T---------C
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352859 30 - 186847797 GATTGT-TG-ATCTTGT-Ttgt-----ctt----gcc---t----t--t----t---------t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19536 30 -     31044 CGCTGC-TG-AGCTCGT-CGAT-----CCT----G-----C----TCTG----T---------C
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479878 24 -    610378 ----GC-TG--CTTCAT-TGAT-----CCC----GT----C----T--G----T---------T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20517 30 +     26378 GACTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33195 30 -     78344 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19842 30 +     25722 GACTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28147 30 -     62838 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Trachypithecus_francoisi.k141_1453105                  C 0 I 1
s Trachypithecus_geei.k141_1001272                           28193 30 +     46913 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9000 30 -     28527 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30084 30 -     64340 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28121 30 -     63452 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9566 30 +     22490 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Trachypithecus_leucocephalus.k141_96450                C 0 I 1
s Trachypithecus_melamera.k141_591572                         2992 30 -      6147 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9897 30 -     13050 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255137 30 -   6242583 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1161 30 +     19340 GATTGT-TG-ATCTTGT-TTGT-----CTT----GCC---T----T--T----T---------T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173197 29 -    200418 ----GC-TG-ATCTTGT-TTAT-----TTT----CT----G----T--G----TT-----AGTT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480163 32 -  10818551 GACAGC-TC-ATCTTGT-TTAT-----CCT----GT----T----C--C-ggga---------a
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833871 29 -   4065304 GGCCGC-TG-ATCTTGT-TGAT-----CCT----GT----C----G--G----T---------T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7891 29 -     70247 GGCCGC-TG-ATCTTGC-TGAT-----CCT----GT----C----C--A----T---------T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361405 29 -  33153633 ----GT-TG-ATCTTGT-TTAT-----TCt----gt----g----t--g----t-----tactt
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3392 20 -     21056 ----GC-TG-ATGTAGT-GTAT-----CCT----GT----------------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 6
s Ursus_maritimus.KK499267.1                                181558 30 +   5085361 ----GC-TG-ATCTTGT-TTAt-----cct----ct----g---tt--a----t-----tattt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  24972 29 -     30710 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Varecia_rubra.k141_787544                              C 0 I 1
s Varecia_variegata.k141_289850                              23879 29 -    147434 GGCTGC-TG-ATCTTGT-TTAT-----CCT----GT----C----T--G----T---------T
i Varecia_variegata.k141_289850                          C 0 I 1
s Vicugna_pacos.KN270157.1                                   76039 20 +   5488506 ----GC-TG-ATCTTGT-TTAT-----TTT----GT----------------------------
i Vicugna_pacos.KN270157.1                               C 0 I 8
s Vulpes_lagopus.VulLag_flattened_line_12041                104696 26 -    112863 ----GC-TG-ATCTTGT-TTAT-----CCT----CT----C-T--T--A----T---------C
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        173881 31 -    224448 GGTTGC-TG-ATCTTGT-TCAG-----TCT----GT----T-T-AT--T----T---------A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28591 26 -     86975 ----GC-TG-ATCTCAT-TTAT-----CCT----CG----G---tt--a----t---------t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                       364 32 -       833 GGCTGC-TG-ATCTTGT-TTAT-----CCTGTCTGC----G----C--C----C----------
i Zapus_hudsonius.ZapHud_scaffold_501999                 C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_572595             812 29 +      1812 ----GT-TA-ATCTTGT-TTAT-----TCT----GT----G----T--G----TT-----ACTT
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              23708 200 -     33621 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Ochotona_princeps.JH802162.1                             2550710 5994 -   3988456 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5227 146 +     36723 T-------------T--T--T------------------C----T---T---T----------------------TT---CAAGGTTTATT-TGTGGA-AAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATCAGCATATAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
s Acinonyx_jubatus.LLWD01001279.1                           812615 151 +   1699592 t-------------a--c--t------------------t----t---t---t-------------------ttctt---ctaggttCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TT--AT---CTGTGCATATT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATACAGCCTGGAA-Actca-acttt-taaatttt----attaatgagC-----T-----A-----A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 5
s Acomys_cahirinus.AcoCah_scaffold_21377                     24888 151 +     63021 T-------------C--T--T-----------------CC----T---T---C--CT---C--------------TC---TGAGGTTCATT-TCTCTA-CAG------TCT-CC-TCTCATTGTT-TAT---ATGC--TT--AC---CTCTGCTGATT-TAAATTGCCT-TAGTGGCA----GC-AG---AGCA--------TA--ATTAGCATATAGAGCCTAGAA-ACTCA-ACTTT-TCAATTTT----ATTAATGAGC-----T-----G-----A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415074 151 +  29979442 t-------------t--t--t------------------c----t---t---c-------------------ttctt---ctaggtTAATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CCGTGCAGATT-TAAAATGCCT-TGGTGGTG----GC-AG---GGAG--------TA--ATTAGTATATAGAGCCTGGAA-actca-acttt-taaatttt----attaatgagC-----T-----A-----A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 5
s Ailurus_fulgens.LNAC01001112.1                            215383 151 +    347723 t-------------t--t--t------------------t----t---c---c-------------------ttctt---ctaggTTCATTTTCTGGA-GAG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATAGAGCCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----A-----A
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 5
s Allactaga_bullata.AllBul_scaffold_20030                    17840 145 -     61208 ---------------------------------------T----T---T---C--C----C----------C---TT---ATAGGTTCATT-TCTGGA-TGG------TCT-CT-TTTCATTGCT-TAT---GTGC--TT--AC---CTGTGCTGACT-TAAATCGGCT-TAGTGGTG----GC-AG---AGAG--------CA--ATTAGCATATGGAG-CTGGAA-ATTCA-ACTTT-TAAACTTG----ATTAATGAGC-----T-----G-----A
i Allactaga_bullata.AllBul_scaffold_20030                I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47548 141 +     53615 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGG----TT-TGTGGG-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCGT-CCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AT-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43526 145 +     44087 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16134 145 -     21945 -----------------T--T-----------------TC----T---T---T----------------------TT---CAGGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17817 145 +     32033 -----------------T--T-----------------TC----T---T---T----------------------TT---CAGGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             71979 147 -     84148 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTC-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---ACAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGCAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44218 147 -     78289 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTC-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---ACAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGCAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43657 147 +     55831 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTC-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---ACAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGCAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42107 147 -     64179 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTC-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---ACAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGCAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23741 147 -     24835 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTC-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---ACAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTACAGTCTGCAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40732 147 +     45454 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTC-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---ACAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCATGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGCAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46381 147 +     70886 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTC-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---ACAC--TC--AT---CCATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGCAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8554 147 +     30854 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTC-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---ACAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGCAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32688 147 +     42133 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTC-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---ACAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGCAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585069 150 +   2318259 ----------------------------------------------------t---------------ttctttctt---ctaggtTCATT-TCCAGA-Caa------tct-ct--ttcatttct-tgt---gTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTA----GC-AG---AAAG--------TA--ATTAGCACACAGAGCCTGGAA-tctca-acttt-taaatttt----attaatgagC-----C-----GATTTGA
i Ammotragus_lervia.NIVO01071767.1                       I 9 I 3
s Anoura_caudifer.AnoCau_scaffold_1412                      176859 149 -    412891 A-------------T--T--T------------------T----C---CCTTCT-C----C--------------TT---CCACATTCATT-TCTAGA-CAG------TCT-CT-CTTCATCACT-TGT---GTGC--TC--AG---ATGTGTAGGTT-TAAAATGCCT-GAGTGGTG----GC-AG---AAAA--------TA--ATTAG---------TCTGGAA-ACTCA-ACTTT-TAAACATT----ATTAATGAGCCGAGTT-----G-----A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50171 155 -     68529 T-----------TTT--T--T------------------T----T---C---TT--T---C--------------TT---CTAGATTCATT-TCCAGA-CAA------TCT-CT--TTCATTTCT-TGT---GTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAATGGTG----GC-AG---AAAG--------TA--ATTAGCATATAGAGCCTGGAA-TCTCA-ACTTT-TAAATTCT----ATTAATGAGC-----C-----GATTTGA
i Antilocapra_americana.AntAmePen_scaffold_21030         I 8 C 0
s Aotus_azarae.k141_887050                                     934 147 +     17741 T-------------T--T--T-----------------TC----T---T---T----------------------TT---TGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGCG----GC-AG---AGAG--------TA--ATTAGTATGTACAGTCTGGAA-AC-CA-ACGTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1559 147 -     15923 T-------------T--T--T-----------------TC----T---T---T----------------------TT---TGAGATTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGCG----GC-AG---AGAG--------TA--ATTAGTATGTACAGTCTGGAA-AC-CA-ACGTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671841 147 +   5030052 t-------------t--t--t-t----------------c----t---t---t----------------------tt---tgaggtttatt-tctgga-cAG------TCG-GT-TTTCATTGCT-TAT---GCGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGCG----GC-AG---AGAG--------TA--ATTAGTATGTATAGTCTGGAA-AC-CA-ACGTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               1835 147 -     16391 T-------------T--T--T-----------------TC----T---T---T----------------------TT---TGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGCG----GC-AG---AGAG--------TA--ATTAGTATGTACAGTCTGGAA-AC-CA-ACGTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1394 147 -     17186 T-------------T--T--T-----------------TC----T---T---T----------------------TT---TGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGCG----GC-AG---AGAG--------TA--ATTAGTATGTACAGTCTGGAA-AC-CA-ACGTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15757 146 -     32367 ---------------------------------------T----T---C---T--CT-T----------------CT---TCAAGTTCATT-TCTGGA-CAG------TCT-TT-TCTCACTGCT-TAT---GTGC--TC--AT---CTAGGCTGATT-TAAAATGCCT-TAGTGGTA----GC-AG---AGGG--------TA--ATTAGCATATATAGCCTGGAA-ATTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 13 C 0
s Arctocebus_calabarensis.k141_1364444                       19299 140 -     45910 ---------------------------------------C----T---T---C----------------------TT---TGAGGTGCCTT-TCCAAA-ACA------TCT-CT-TTTCATTGCT-TAT---GTGC--TT--AC---CAGTGCTGCCT-TGAAGTACC----ATGGTG----GC-AG---AGTG--------TA--ATTAGCACATGGCTCCTGGAA-ACTCA-ACTTT-TAAATCAT----ATTAATAAGC-----T-----G-----A
i Arctocebus_calabarensis.k141_1364444                   I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5136 151 -     15198 A-------------T--T--T------------------T----T-TCCCTCCT--T---C--------------TT---CCACATTCATT-TCTAGA-CAG------TCT-CT-CTCTATCGCT-TGT---GTGC--TC--AT---CTGTATAGGTT-TAAAATGCCT-GAGCGGTG----GC-AG---AAAA--------TA--ATTAG---------CCCGGAA-ACTCA-ACTTT-TGAACATT----ATTAATGAGCTGAGTT-----G-----A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274442 120 +  21539123 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTC-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAA---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGGAA-AC-C------------------------------------------------
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 18
s Ateles_belzebuth.k141_1572163                              10608 120 +     48076 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTC-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAA---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGGAA-AC-C------------------------------------------------
i Ateles_belzebuth.k141_1572163                          C 0 I 18
s Ateles_chamek.k141_615173                                   5745 120 -     28759 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTC-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAA---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGGAA-AC-C------------------------------------------------
i Ateles_chamek.k141_615173                              C 0 I 18
s Ateles_geoffroyi_a.k141_1283730                              33299 120 +     44353 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTC-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAA---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGGAA-AC-C------------------------------------------------
i Ateles_geoffroyi_a.k141_1283730                          C 0 I 18
s Ateles_marginatus.k141_970259                              48668 120 -     71267 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTC-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAA---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGGAA-AC-C------------------------------------------------
i Ateles_marginatus.k141_970259                          C 0 I 18
s Ateles_paniscus.k141_866194                                22728 120 -     33135 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTC-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAA---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGGAA-AC-C------------------------------------------------
i Ateles_paniscus.k141_866194                            C 0 I 18
s Avahi_laniger.k141_2756659                                  5964 148 +     11645 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TACAATGCCT-TCCCGGCG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Avahi_laniger.k141_2756659                             I 6 C 0
s Avahi_peyrierasi.k141_1823318                               5972 148 -     19611 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TACAATGCCT-TCCCGGCG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Avahi_peyrierasi.k141_1823318                          I 6 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7956962 146 -  23207421 t-------------g--t--t------------------t----t---c---c-------------------ttctt---ctagGTTCATT-TCCA-----G------TCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CTATGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGACTGGAA-ACTCa-acttc-taaatttt----attaatgaGC-----T-----G-----A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         4171 146 -      4711 t-------------g--t--t------------------t----t---c---c-------------------ttctt---ctagGTTCATT-TCCA-----G------TCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CTATGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGACTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86069 158 +    124022 T--------TTTTTT--T--T------------------T----T---C---TT--T---C--------------TT---CTAGGTTCATT-TCCAGA-CAA------TCT-CT--TTCATTTCT-TGT---GTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTA----GC-AG---AAAG--------TA--ATTAGCACATAGAGCCTGGAA-TCTCA-ACTTT-TAAATTTT----ATTAATGAGC-----C-----GATTTGA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21608 152 +    288883 --------------t--t--t------------------t----t---c---t-------------------ttctt---ctaggtTCATT-TCCAGA-Caa------tct-ct--ttcatttct-tgt---gTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTA----GC-AG---AAAG--------TA--ATTAGCACATACAGCCCGGAA-TCtca-acttt-tacatttt----attaatgagC-----C-----GATTTGA
i Bison_bison.KN261452.1                                 I 7 C 0
s Bos_indicus.CM003047.1                                  20355987 166 +  48749331 ttttttttttttgtt--t--t------------------t----t---c---t-------------------ttctt---ctaggtTCATT-TCCAGA-Caa------tct-ct--ttcatttct-tgt---GTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTA----GC-AG---AAAG--------TA--ATTAGCACATACAGCCNGGAA-TCtca-acttt-tacatttt----attaatgaGC-----C-----GATTTGA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754555 161 +   1948126 ttttttt-----gtt--t--t------------------t----t---c---t-------------------ttctt---ctaggtTCATT-TCCAGA-caa------tct-ct--ttcatttct-tgt---gTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTA----GC-AG---AAAG--------TA--ATTAGCACATACAGCCTGGAA-TCtca-acttt-tacatttt----attaatgagC-----C-----GATTTGA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544694 165 -  45695690 ttttttttttt-gtt--t--t------------------t----t---c---t-------------------ttctt---ctaggtTCATT-TCCAGA-caa------tct-ct--ttcatttct-tgt---gTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTA----GC-AG---AAAG--------TA--ATTAGCACATACAGCCTGGAA-TCtca-acttt-tacatttt----attaatgagC-----C-----GATTTGA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529719 160 -   4408762 gttttttt------t--t--t------------------t----t---c---t-------------------ttctt---ctaggtTCATT-TCCAGA-caa------tct-ct--ttcatttct-tgt---gTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTA----GC-AG---AAAG--------TA--ATTAGCACATACAGCCTGGAA-TCtca-acttt-tacatttt----attaatgagC-----C-----GATTTGA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7609 147 +     28062 C-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGCTTATT-TCTGGA-CAG------TCG-GT-TTTCATTCTT-TAT---GCAC--TC--AT---CTACGCTGCTT-TGAAATGCCT-TCGTGGTG----GC-AG---AGAG--------GA--ATTAGCACGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----GTTAATGAGC-----T-----G-----A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  42903 147 -     91139 C-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGCTTATT-TCTGGA-CAG------TCG-GT-TTTCATTCCT-TAT---GCAC--TC--AT---CTACGCTGCTT-TGAAATGCCT-TCGTGGTG----GC-AG---AGAG--------GA--ATTAGCACGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----GTTAATGAGC-----T-----G-----A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20429 147 +     95584 C-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGCTTATT-TCTGGA-CAG------TCG-GT-TTTCATTCCT-TAT---GCAC--TC--AT---CTACGCTGCTT-TGAAATGCCT-TCGTGGTG----GC-AG---AGAG--------GA--ATTAGCACGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----GTTAATGAGC-----T-----G-----A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20342 147 +    119600 C-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGCTTATT-TCTGGA-CAG------TCG-GT-TTTCATTCCT-TAT---GCAC--TC--AT---CTACGCTGCTT-TGAAATGCCT-TCGTGGTG----GC-AG---AGAG--------GA--ATTAGCACGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----GTTAATGAGC-----T-----G-----A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                             9914 147 +     18648 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-GAG------TCG-GT-TTTCATTGCT-TAC---GCAC--TC--AT---CTATGCTGCTT-TAAAATGTGT-TCGTGGTG----GC-TG---AGAG--------TA--ATTAGCATGTACAGTCTGGAA-AT-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9449 147 -     13885 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CGG------TCG-GT-TTTCATTGCT-TAG---GCGC--TC--AT---CTATGCTGCTT-TAAAATGCAT-TCGTGGTG----GC-CG---AGAG--------TA--ATTAGCATGTACAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1519 147 -      8861 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-GAG------TCA-GT-TTTCATTGCT-TAC---GCAC--TC--AT---CTATGCTGCTT-TAAAATGTGT-TCGTGGTG----GC-TG---AGAG--------TA--ATTAGCATGTACAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165453912 147 + 189096842 T-------------T--T--T-----------------TC----T---T---T----------------------TT---TGAGGTTTATT-TCTGGA-GAG------TCA-GT-TTTCATTGCT-TAC---GCAC--TC--AT---CTATGCTGCTT-TAAAATGTGT-TCGTGGTG----GC-CG---AGAG--------TA--ATTAGCATGTACAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1435 147 +      8664 T-------------T--T--T-----------------TC----T---T---T----------------------TT---TGAGGTTTATT-TCTGGA-GAG------TCA-GT-TTTCATTGCT-TAC---GCAC--TC--AT---CTATGCTGCTT-TAAAATGTGT-TCGTGGTG----GC-CG---AGAG--------TA--ATTAGCATGTACAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Callithrix_kuhlii.k119_102356                          I 1 C 0
s Camelus_bactrianus.KN276810.1                            7630733 149 +  17673402 t-------------t--t--t------------------t----c---t---c-------------------ttctt---ctaggTTCATT-TTCAGA-CAG------TCG-CTCTTTCATTGCT-TGT---CTGC--TC--AT---CTGTAcgtatt-taaaatgctt-tagtgGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCTAGGAA-Acta--a-ctt-tacatttt----attaatgagC-----T-----G-----A
i Camelus_bactrianus.KN276810.1                          I 8 I 5
s Camelus_dromedarius.KN272107.1                           4665019 149 +   7040546 t-------------t--t--t------------------t----c---t---c-------------------ttctt---ctaggTTCATT-TTCAGA-CAG------TCG-CTCTTTCATTGCT-TGT---CTGC--TC--AT---CTGTACgtatt-taaaatgctt-tagtGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCTAGGAA-ACta--a-ctt-tacatttt----attaatgagC-----T-----G-----A
i Camelus_dromedarius.KN272107.1                         I 8 I 5
s Camelus_ferus.KB017975.1                                 1208679 149 +   1652518 t-------------t--t--t------------------t----c---t---c-------------------ttctt---ctaggTTCATT-TTCAGA-CAG------TCG-CTCTTTCATTGCT-TGT---CTGC--TC--AT---CTGTACGTATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCTAGGAA-ACta--a-ctt-tacatttt----attaatgagC-----T-----G-----A
i Camelus_ferus.KB017975.1                               I 8 I 5
s CanFam4.chr16                                           42505091 151 +  60362399 T-------------T--T--T------------------T----T---T---CT--T---C--------------TT---CTTGGTTCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAATACATAGAGCCTGGAA-ACTTA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----A-----A
i CanFam4.chr16                                          C 0 I 5
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8727 151 -     23171 T-------------T--T--T------------------T----T---T---CT--T---C--------------TT---CTTGGTTCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAATACATAGAGCCTGGAA-ACTTA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----A-----A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 5
s Canis_lupus_dingo.QKWQ01000480.1                          222070 151 +   9314153 t-------------t--t--t------------------t----t---t---c-------------------ttctt---cttggttCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAATACATAGAGCCTGGAa-actta-acttt-taaatttt----attaatgagC-----T-----A-----A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 5
s Canis_lupus_familiaris.chr16                            41615205 151 +  59632846 t-------------t--t--t------------------t----t---t---c-------------------ttctt---cttggttCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAATACATAGAGCCTGGAa-actta-acttt-taaatttt----attaatgagC-----T-----A-----A
i Canis_lupus_familiaris.chr16                           C 0 I 5
s Canis_lupus_orion.HG994398.1                            45106786 151 -  63665305 t-------------t--t--t------------------t----t---t---c-------------------ttctt---cttggttCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAATACATAGAGCCTGGAa-actta-acttt-taaatttt----attaatgagC-----T-----A-----A
i Canis_lupus_orion.HG994398.1                           C 0 I 5
s Capra_aegagrus.CM003241.1                               27408802 146 -  46296322 ----------------------------------------------------t-------------------ttctt---ctaggtTCATT-TCCAGA-caa------tct-ct--ttcatttct-tgt---gTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTA----GC-AG---AAAG--------TA--ATTAGCACATAGAGCCTGGAA-tctca-acttt-taaatttt----attaatgagC-----C-----GATTTGA
i Capra_aegagrus.CM003241.1                              I 12 I 3
s Capra_hircus.CM004588.1                                 26591076 146 +  44709034 ----------------------------------------------------t-------------------ttctt---ctaggtTCATT-TCCAGA-caa------tct-ct--ttcatttct-tgt---gTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTA----GC-AG---AAAG--------TA--ATTAGCACATAGAGCCTGGAA-Tctca-acttt-taaatttt----attaatgagC-----C-----GATTTGA
i Capra_hircus.CM004588.1                                I 13 I 3
s Capromys_pilorides.CapPil_scaffold_652123                   1315 116 -      1880 ------------------------------------------------------------------------------------------------------------TCT-CT-TTTCCTTACT-TAA---GTGC--TC--CT---CCATGCTGATT-TAAAATACCT-TAGTGATT----G--TG---AGAG--------TA--ATTAGCATACAGAACTTGGAA-ACTCA-ACTTC-TAAATTTC----ATTAATGAGC-----C-----T-----A
i Capromys_pilorides.CapPil_scaffold_652123              I 26 C 0
s Carlito_syrichta.NW_007259797.1                           270170 149 +    496798 t-------------t--t--t-t----------------c----t---t---c----------------------tt---tgaggtTTATT-TCTTGG-CAG------TCTCCT-TTTTATTGCT-TAT---TTGC--TT--CT---TTGTTCTGCTT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGGCTGGAA-actca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Carlito_syrichta.NW_007259797.1                        I 9 C 0
s Carollia_perspicillata.CarPer_scaffold_1219592               260 149 +       483 A-------------T--T--T------------------T----T---CCTTCT--T---C--------------TT---CCACGTTTGTT-TCTAGG-CAG------TCT-CT-CTTCATCGCT-TGT---GTGC--TC--AT---CCATGTAGGTT-TAAAATGCCT-GAGCGGCG----GC-AG---AAAA--------TA--ATTAG---------CCTGGAA-ACTCA-ACTTT-TACACATT----ATTAATGAGCCGAGTT-----G-----A
i Carollia_perspicillata.CarPer_scaffold_1219592         N 0 N 0
s Castor_canadensis.CasCan_scaffold_39952                    27413 150 -     39886 --------------T--A--T-----------------TC----T---C---T----GT-C--------------TT---TCAGGTTCATT-TCTGGA-CAG------TCT-CT-TTTCATTGCT-TTT---GTGC--TC--AT---CTGTGCTGATT-TAAAATGTTG-TAGTGAGG----GC-AG---AGAG--------TA--ATTAGTGTAGAGAGCCTGTAA-ACTCA-ACTTT-TATATTTC----ATTTATGAGC-----T-----G-----A
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79268 151 -    217609 T-------------T--T--T------------------T---AT---T---CT--T---C--------------TT---CTAGTTTCATT-TCCAGA-CAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTATTCAGATT-TAAAATGCCT-TAGTTGTA----GC-AC---CGTG--------TA--ATCAGCATACAGAGACCAGAA-ACCCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996161 116 +  23392119 ------------------------------------------------------------------------------------------------------------tct-ct-tttccttgcT-TAA---GTGC--TC--AT---CTGTGTTGATT-TAAAATACCT-TACTGGCG----G--TG---AGAG--------TA--ATTAGCATACAGAACCTGGAA-Actca-atttc-taaatttt----attaatgAGC-----C-----T-----A
i Cavia_aperea.AVPZ01000300.1                            I 16 C 0
s Cavia_porcellus.DS562891.1                               4999603 116 +  23407841 ------------------------------------------------------------------------------------------------------------tct-ct-tttccttGCT-TAA---GTGC--TC--AT---CTGTGTTGATT-TAAAATACCT-TACTGGTG----G--TG---AGAG--------TA--ATTAGCATACAGAACCTGGAA-Actca-atttc-taaatttt----attaatgAGC-----C-----T-----A
i Cavia_porcellus.DS562891.1                             I 16 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62684 116 -     66877 ------------------------------------------------------------------------------------------------------------TCT-CT-TTTCCTTGCT-TAA---GTGC--TC--AT---CTGTGTTGATT-TAAAATACCT-TACTGGTG----G--TG---AGAG--------TA--ATTAGCATACAGAACCTGGAA-ACTCA-ATTTC-TAAATTTT----ATTAATGAGC-----C-----T-----A
i Cavia_tschudii.CavTsc_scaffold_23560                   I 16 C 0
s Cebuella_niveiventris.k141_592277                           4832 147 -     12580 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-GAG------TCA-GT-TTTCATTGCT-TAC---GCAC--TC--AT---CTATGCTGCTT-TAAAATGTGT-TCGTGGTG----GC-CG---AGAG--------TA--ATTAGCATGTACAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               42890 147 +     53515 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-GAG------TCA-GT-TTTCATTGCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGTGT-TCGTGGTG----GC-CG---AGAG--------TA--ATTAGCATGTACAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370820 147 -  26074798 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CAG------TTG-GT-TTTCATTGCT-TAC---ACGC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7709 147 -     34880 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CAG------TTG-GT-TTTCATTGCT-TAC---ACGC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66804 147 -     89041 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTGTT-TCTGGA-CAG------TTG-GT-TTTCATTGCT-TAC---ACGC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGGAA-AC-TA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2134 149 -      5494 T-------------T--T--T-----------------TC----T---T---C----------------------TT---TGAGGTTTATT-TCTTGG-CAG------TCTCCT-TTTTATGGCT-TAT---TTGC--TT--CT---TTGTTCTGCTT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGGCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cephalopachus_bancanus.k141_1689090                    I 9 C 0
s Ceratotherium_simum.JH767749.1                          15491903 150 -  27778364 t-------------t--t--t------------------t----t---t---c-------------------ttcat---cgaAGTTCATT-TCTAGG-CAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--GT---CTGTGCAGATT-TAAAATGCTT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCACATAGAGCCTGGaa-actca-gtttt-taaatttt----actaatgAGC-----T-----G-----A
i Ceratotherium_simum.JH767749.1                         I 1 I 5
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18736 150 +     27315 T-------------T--T--T------------------T----T---T---CT--T---C--------------AT---CGAAGTTCATT-TCTAGG-CAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--GT---CTGTGCAGATT-TAAAATGCTT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCACATAGAGCCTGGAA-ACTCA-GTTTT-TAAATTTT----ACTAATGAGC-----T-----G-----A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 1 I 5
s Cercocebus_atys.KQ010504.1                                140721 145 -   4669795 -----------------t--t-t----------------c----t---t---t----------------------tt---caaggtttgTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTAC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTAGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAa-ac-ca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44463 145 +     47900 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44287 145 -     44860 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTAC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTAGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44276 145 -    148725 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTAC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTAGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26463 145 -     40656 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6429 145 +     20796 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11546 145 -     17524 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27268 145 -     34525 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TGT---GTGC--TC--GT---CTGTGCTGCTT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCCGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11049 146 -     25376 -----------------T--T----------------TTC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363645 145 -  39242232 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269361 146 +  21565898 -----------------T--T----------------TTC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TGGTGGTA----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31735 145 -     45857 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26634 145 -     32606 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2793 145 +      8499 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25190 145 +     70610 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22160 145 +     36323 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12480 150 -     19938 A-------------T--T--T---------------ACCT----T--TT---CT----------------------T---CTAGGTTCATT-TCCAGA-CAG------TCT-CT-GTTCATTG-T-TGT---GTGC--TT--GT---CGGTGCAGATT-TAAAACGTCT-TAGTGGTG----GC-AG---GAAG--------CA--ATTAGCATATAGAGCCTGAAA-ACTCA-ACTTT-TAGATTTT----ATTAATGAGC-----A-----G-----A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30340 148 -     33796 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CCGTGCGGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cheirogaleus_major.k141_666340                         I 6 C 0
s Cheirogaleus_medius.k141_759766                             4857 148 -     15404 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CCGTGCGGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Cheirogaleus_medius.k141_759766                        I 6 C 0
s Cheracebus_lucifer.k141_2312002                             8706 148 -     32913 T-------------T--T--T----------------TTC----T---T---T----------------------TC---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCAC--TC--AC---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATTAGCATGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19119 148 -     40346 T-------------T--T--T----------------TTC----T---T---T----------------------TC---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCAC--TC--AC---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATTAGCATGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19374 148 +    216457 T-------------T--T--T----------------TTC----T---T---T----------------------TC---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCAC--TC--AC---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATTAGCATATAGAGTCTGGAA-AC-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19167 148 +     39636 T-------------T--T--T----------------TTC----T---T---T----------------------TC---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCAC--TC--AC---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATTAGCATGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238539 116 -   2543920 ------------------------------------------------------------------------------------------------------------TCT-CT-GTTCCTTGCT-GAA---GTGC--TC--AT---CTGTGCTGATT-TAAAATGCCT-TAGTGGTG----G--TG---AGAA--------TA--ATTAGCATACAGAACCTGGAA-ACTCA-acttc-taaatttt----attaatgaGC-----C-----T-----A
i Chinchilla_lanigera.JH722012.1                         I 26 C 0
s Chiropotes_albinasus.k141_1946120                           3761 149 +      5346 T-------------T--TCTT-----------------TC----T---T---T----------------------TT---CCAAGTTTATT-TCTGGA-CAG------TCA-GT-TTTCATTGCT-TAC---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCGT-TCGTGGTG----GC-CG---AGAG--------TA--ATTAGCATGCAGAGTCTGGAA-AC-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----A-----A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42240 147 -    112038 C-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGCTTATT-TCTGGA-CAG------TCG-GT-TTTCATTCCT-TAT---GCAC--TC--AT---CTACGCTGCTT-TAAAATGCCT-TCGTGGCG----GC-AG---AGAG--------GA--ATTAGCACGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----GTTAATGAGC-----T-----G-----A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7811 147 +     34062 C-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGCTTATT-TCTGGA-CAG------TCG-GT-TTTCATTCCT-TAT---GCAC--TC--AT---CTACGCTGCTT-TAAAATGCCT-TCGTGGCG----GC-AG---AGAG--------GA--ATTAGCACGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----GTTAATGAGC-----T-----G-----A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343051 145 +  18827391 -----------------T--T-----------------TC----T---T---T----------------------TT---CAGGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCGT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9598 145 -     44032 -----------------T--T-----------------TC----T---T---T----------------------TT---CAGGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCGT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304375 145 - 135778131 -----------------t--t-t----------------c----t---t---t----------------------tt---cagggtttgtt-tGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCGT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAa-ac-ca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14531 139 +     15858 ---------------------------------------------------------------------------TT---CTTGGTTCATT-TCTAGA-CAG------TCT-CC-TTTCATTG-T-TGT---GTGT-GCT--GT---CTGTGCAGATT-TAAAATGCCT-TAGTGGAT----GC-AG---GAGG--------TA--ATTAGCATATAGAGCCTGAAA-ACTCA-ACTTC-TGAATTTT----ATTAACGAGC-----C-----G-----A
i Choloepus_didactylus.ChoDid_scaffold_70559             I 13 C 0
s Choloepus_hoffmanni.KN194906.1                            606107 138 -    839153 ---------------------------------------------------------------------------tt---cttggttCATT-TCTAGA-CAG------TCT-CC-TTTCATTG-T-TGT---GTGC--TT--GT---CTGTGCAGAGT-TAAAATGCCT-TAGTGGAT----GC-AG---GAGG--------TA--ATTAGCATATAGAGCCTGAAA-ACTCA-ACTTC-TGAATTTT----ATTAACGAGC-----C-----G-----A
i Choloepus_hoffmanni.KN194906.1                         I 13 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                527 138 +      2406 ----------------------------------------------------------------------------------GTGTTCTCA-TCTAGG-CAG------TCT-CT-TTTTATTGTT-TGTTGTGTGG--TC--AT---CTGTACAGAAA-TAAAATGCCT-TTGTGGTG----GC-AA---GGAG--------TA--ATTAGCATACAGAACCTGGA-AACTCA-ACTTT-TTAA----TTTTATTAATAAGC-----T-----G-----A
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          I 13 I 8
s Colobus_angolensis.KN981557.1                             408800 145 -   2368649 -----------------t--t-t----------------c----t---t---t----------------------tt---caaggtttGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TA--AT---CCGTGCGGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGaa-at-ca-acttt-taaatttt----attaatgatC-----T-----G-----A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378676 145 - 200372422 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGTT-TAT---GTGC--TA--AT---CTGTGCGGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGATC-----T-----G-----A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2225 145 -     84244 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TA--AT---CCGTGCGGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGATC-----T-----G-----A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35806987 139 +  53390261 ----------------------------------------------------t-------------------tcctt---c---attcatt-tctaGA-CAA------TCT-CT-TTTCATTGTT-TAT---GTGC--TT--GT---C--TGCACATT-TAAAATGCCT-CAGAGGTG----GC-AG---GGAA--------TA--ATTAGCACAGAGAGCCTAGAA-Actca-actttttatatttt----attaatgagc-----c-----g-----a
i Condylura_cristata.JH655891.1                          I 6 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2509 133 -      8242 ---------------------------------------------------------------------------TT---CTAGGTTTATT-TCTAGA-TAG------TCT-CT-CTTCATTGCT--GT---GTGC--TT--AT---CTTTGCAAATT-TAAAATGCC--TGGTGGTG----GC-AG---AAAA--------TA--ATTAG---------CCTGGAA-ATTTA-ACTTT-TAAATTTT----ATTAATGAAC-----TGAGTTG-----A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 10 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44025 157 -     83289 T-------------T--T--C-----------------TC----T---C---T--CTCT-CT---------C-TTTT---TCAGGTTCATT-TCTCAA-CAG------TCT-CT-TTTCATTGTT-TAT---ATGC--TT--AC---CTGGGCAGATT-TAAATTGCCT-TAGTGGTG----GT-AG---AGAA--------TA--ATTAGCACTTTGAGCCTCGAA-ACTCA-ACTTT-TTAATTTT----ATTAATGAGC-----T-----G-----A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114595 151 - 224834208 t-------------t--c--cc-----------------c----T---T---C-A-T---C--------------TT---TCAGGTTCATT-TCTCAA-CAG------TCT-CC-TTTCCTTGTT-TAT---GTGC--TT--AC---CTGTGCTAATT-TCAATTGCTT-TAGTGGCA----GC-AG---AGAA--------TA--ATTAGCACAGAGAGCCTGGAA-ACTCA-ACTTT-TCAATGTT----ATTAATGAGC-----T-----G-----A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9202  75 +     12657 C-------------T--T--T------------------T----T---C---CT--T---C--------------TT---TTAGATTAATT-TCCAGA-AAG------GCT-CT-TTTCATTGCT-TAT---GTGT--TC--AT---CATTGGAGATT-TCAAA--------------------------------------------------------------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 54
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4061 150 +     87169 T-------------T--T--T------------------T----T---T---CT--T---CTT--------C---TT---CTAGGTTAATTTTCTAGA-GAC------TCT-CT-AGAAA----T-TAT---GTGC--TC--AT---CTGTGCACATT-TAAAATGCCT-TAACGGTG----GC-AG---AGAG--------TA--ATTAGTATATACAGTCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----C-----A-----A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 5
s Ctenodactylus_gundi.CteGun_scaffold_65                    644726 151 -   1526836 T-------------T--C--C-----------------CC----A---C---T--CT---C--------------TT---TCAGGTCCATT-TCTGGA-CAG------TCT-AT-TTTTATTGCT-TAT---GTGC--TC--AT---CTGTACTGATT-TAAAATACCT-TAATGATG----CC-AG---AGAG--------TA--ATTAGCATACACAGCCCGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGATC-----T-----G-----A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18111 111 +     50838 ------------------------------------------------------------------------------------------------------------TCT-CT-TCTCCTGGCT-TAA---GTGC--TC--AT---CAGTGCTGATT-TAAAATACCT-TAGTGATT----G--TG---AGAG--------TA--ATTAGCATA-----CCTGGAA-ACTCA-ACTTC-TAAGTTTC----ATTAATGAGC-----C-----T-----A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 25 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4084 116 +     36344 ------------------------------------------------------------------------------------------------------------TCT-CT-TTACCTTGCT-TAA---ATGC--TC--AT---CTGTGCTGATT-TAAAATACTT-TAGTGGTG----G--CG---AGAG--------TA--ATTAGCATACAGGACCTGGAA-ACTCA-ATTTC-TAAATTTT----ATTAATGAGC-----C-----T-----A
i Cuniculus_paca.CunPac_flattened_line_7025              I 26 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27860 116 +     75252 ------------------------------------------------------------------------------------------------------------TCT-CT-TTTCCTTGCT-TAA---GTGC--TC--AT---CTGTGCTGATT-TAAAATACCT-TAGTGGTG----G--TG---AGAG--------TA--ATTAGCATACAGAACCTGGAA-ACTCA-ATTTC-TAAATTTT----ATTAATGAGT-----C-----T-----A
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 26 C 0
s Dasypus_novemcinctus.JH564415.1                          2109827 153 -   2246927 a-------------c--t--a--------a------tt-t----c--tt---c-------------------ttctt---ctgggctCATT-TCTAGA-GAG------TCT-CT-GTTcattg-t-tgt---gtgc--tt--gt---ctgtGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---GAAG--------TA--ATTAGCATATAGAGCCCCAAA-ACTca-acttt-taaagttt----attagtGAGC-----A-----G-----A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292279  85 +  12879189 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-GCG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CCATGCTGCTT-TAAAATGCCT-TCGTGGC-------------------------------------------------------------------------------------------------------
i Daubentonia_madagascariensis.ctg71                     I 1 I 62
s Delphinapterus_leucas.KZ290073.1                        18625494 150 -  35494412 t-------------t--t--t------------------t----t---c---c-------------------ttctt---ctaggTTCATT-TCCAGA-CAG------TCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CTATGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATACAGCCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330176 149 -   2620052 a-------------t--t--t------------------t----t---ccttc-------------------ttctt---ccacaGTCACT-TCTAGA-CAG------TCT-CT-CTTCATCGCT-CGT---GTGC--TC--AT---CTGTGTGGGTT-TAAAATGCCC-AAGTGGTG----GC-AG---AAAA--------TA--AGTAG---------CCTGGAA-ACTca-acttt-taaacatt----attaatgaGCCGAGTT-----G-----a
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664185 150 -   1390856 t-------------t--t--t------------------t----t---t---c-------------------ttcat---cgaAGTCCATT-TCTAGG-CAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--GT---CTGTGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCACATAGAGCCTGGAa-actca-gtttt-taaatttt----actaatgAGC-----T-----G-----A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 5
s Diceros_bicornis.DicBicMic_scaffold_5955                  138980 150 -    198055 T-------------T--T--T------------------T----T---T---CT--T---C--------------AT---CGAAGTTCATT-TCTAGG-CAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAACGCTT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCACATAGAGCCTGGAA-ACCCA-GTTTT-TAAATTTT----ACTAATGAGC-----T-----G-----A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 I 5
s Dinomys_branickii.DinBra_scaffold_10381                    98625 116 -    115145 ------------------------------------------------------------------------------------------------------------TCT-CT-GTTCCCTGCT-GAA---ATGC--TC--AT---CTGTGCTGATT-TAAAATACCT-TAGTGGTG----C--TG---AGAG--------TA--ATTAGCATACAGAACCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----C-----T-----A
i Dinomys_branickii.DinBra_scaffold_10381                I 26 C 0
s Dipodomys_ordii.KN672350.1                              18950197 163 -  37912305 t-------------t--t--tctttttttaaaaaaatttc----t---c---ttgC-------------------AT---TCAGGTTGATT-TCTGGA-GAG------TCT-CT-TTTCATTGCT-TCT-----GT--TT--AT----TGTGCTGGTG-TAAAATAGTT-CAATGTTG----GG-CG---AGAG--------TA--ATTAGTGTAGAGAGCCTGGAA-A--CA-ACTTT-TAAATTCT----ATTAATGAGC-----T-----G-----A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5135 163 -     10735 T-------------T--T--TCTTTTTTTTAAAAAATTTC----T---C---TT---G--C--------------AT---TCAGGTTGATT-TCTGGA-GAG------TCT-CT-TTTCACTGCT-TCT-----GT--TT--AT----TGTGCTGGTG-TAAAACAGTT-CAATGTTG----GG-CG---AGAG--------TA--ATTAGTGTAGAGAGCCTAGAA-A--CA-ACTTT-TAAATTCT----ATTAATGAGC-----T-----G-----A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10120 116 +     14636 ------------------------------------------------------------------------------------------------------------TCT-CT-TTTCCTTGCT-TAA---GTGC--TC--AT---CTGTGCTGATT-TAAAATACCT-TAGTGGTG----G--TA---AGAG--------TA--ATTAGCATATAGAACCTGGAA-ACTCA-ATTTC-TAAATTTT----ATTAATGAGC-----C-----T-----A
i Dolichotis_patagonum.DolPat_scaffold_80628             I 26 C 0
s Echinops_telfairi.JH980293.1                            62854817 122 - 111700974 ------------------------------------------------------------------------------------------------------------TCT-CT-TTGCATTGTT-TACTGTATGT--TTAAAT---CTGCACAGATT-TAAAAGGGCT-TCGTGGTG----GC-AA---GGAG--------TA--ATCAGCATATAGAACCTGGA-CACtca-atttt-ctaa----tttcattaaTGAGT-----G-----G-----A
i Echinops_telfairi.JH980293.1                           I 43 C 0
s Eidolon_helvum.AWHC01266696.1                               5998  99 +     19438 ---------------------------------------------------------------------------------------------------------------------------CT-TGT---GTGC--TC--AT---CAGTGCAGATT-TAAAATGCC--TAAGTATG----AT-AG---AGGG--------TA--TTTAG---------CTCAGAA-Actca-acttt-taaatttt----attaatgaac-----tGAGTTG-----A
i Eidolon_helvum.AWHC01266696.1                          I 36 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239433 155 -    607251 ttt-----------t--t--t------------------t----t---c---t-------------------ttctt---ctaggtTCATT-TCCAGA-Caa------tct-ct--ttcatttct-tgt---gTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTG----GC-AG---AAAG--------TA--ATTAGCATATAGAGCCTGGAA-TCTcg-acttt-taaatttc----attaatgaGC-----C-----GATTTGA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108450 152 -  10337057 at------------t--t--a-t----------------t----t--at---t-------------------ttcctcccCTTGTTTTATT-TCTAAT-CAG------TCT-CT-TTTGATTGAT-AATTGTGTGC--CT--CT---CTGTACAGATT-TTAAATGCCT-TAGC-GTA----GC-AG---GGAG--------TA--ATTAGCAGGCAGAACCTGGA--ACTCA-ACTTT-TTAA---------TTAGTGAGC-----C-----A-----A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30742 152 +    110024 t-------------t--c--tc-----------------c----t---t---c-------------------ctctt---tcagaTTCATT-TCTTAA-CAG------TCT-CC-TTTCATTGTT-TAT---GTGC--TT--AC---CTGCGCTAATT-TCAATTGCCT-TAGTGGCA----AC-AG---AGAA--------TA--ATTAGCGTATAGAGCCTAGAA-ACTcaaacttt-tcaatttt----attaatgaGC-----T-----G-----A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12713 152 +     18970 t-------------t--c--tc-----------------c----t---t---c-------------------ctctt---tcaggTTCATT-TCTCAA-CAG------TCT-CC-TTTCATTGTT-TAT---GTGC--TT--AT---CTATGCTAATT-TCAATTGCCT-TAGTGGCA----AC-AG---AGAA--------TA--ATTAGCATATAGAGCCTAGAA-ACTcaaacttt-tcaatttt----attaatgaGC-----T-----G-----A
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915812 151 +  41312741 t-------------t--t--t------------------t----t---c---c-------------------ttctt---ctaggTTCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATAGAACCTGGAA-actca-acttt-taaatttt----attactggGC-----T-----A-----A
i Enhydra_lutris.KZ291758.1                              C 0 I 5
s Eptesicus_fuscus.JH977646.1                             12578611 148 +  14770903 a-------------t--t--t------------------t----t---t---c----------------ttctcctt---ctaggTTCATT-TCTAGA-CAGTC--AGTCT-CT-TTTCGTTGCT-TGC---GTGC--TC--AT---CTGTGTAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAG---------CCTGGAA-Actca-acttt-tatatttt----attaatgagc-----T-----G-----A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041065 149 -   4378816 t-------------t--t--t------------------t----t---t---c-------------------ttcat---ctaagtTCATT-TCTAGG-CAG------TCT-CT-TTTCATTGct-tgt---gtgc--at--gt---ctgtgcagATT-TAAAATGCCT-CAGTGGTG----GC-AG---AGAG--------TA--ATTAACATATAGAGCCTGGaa-actca-at-tt-taaatttt----attaatgagC-----T-----G-----A
i Equus_asinus.JREZ01000139.1                            I 1 I 5
s Equus_caballus.CM000403.2                               21375003 149 +  39960074 t-------------t--t--t------------------t----t---t---c-------------------ttcat---ctaagtTCATT-TCTAGG-CAG------TCT-CT-TTTCATTGct-tgt---gtgc--at--gt---ctgtgcagATT-TAAAATGCCT-CAGTGGTG----GC-AG---AGAG--------TA--ATTAACATATAGAGCCTGGaa-actca-at-tt-taaatttt----attaatgagC-----T-----G-----A
i Equus_caballus.CM000403.2                              I 1 I 5
s Equus_przewalskii.ATBW01110277.1                             384 149 -      1194 t-------------t--t--t------------------t----t---t---c-------------------ttcat---ctaagtTCATT-TCTAGG-CAG------TCT-CT-TTTCATTGCT-TGT---GGGC--AT--GT---CTGTGCAGATT-TAAAATGCCT-CAGTGGTG----GC-AG---AGAG--------TA--ATTAACATATAGAGCCTGGaa-actca-at-tt-taaatttt----attaatgagC-----T-----G-----A
i Equus_przewalskii.ATBW01110277.1                       I 1 I 5
s Erinaceus_europaeus.JH835339.1                           3665771 146 +   7059049 -----------------t--g------------------t----t---t---t-------------------tactt---ctatGCTCTTT-TCTAGG-TCA--------T-CC-TTTTATTGCT-TGT---GTGC--TC--AT---TTATGCAGGTT-TAAAATACTT-CAGTGGTG----TC-AG---GGAG--------TA--ATTAACACATAGAGTCCAGAA-ACTCA-ACTTT-AGAATTTT----ATTAATGAGC-----T-----G-----A
i Erinaceus_europaeus.JH835339.1                         I 1 C 0
s Erythrocebus_patas.Contig38                               262578 145 +  21539334 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTGTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64834 150 -    133382 T-------------G--T--T------------------T----T---C---CT--T---C--------------TT---CTAGGTTCATT-TCCAGA-CAG------TCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CTATGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGACTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             5053 150 +      7672 T-------------G--T--T------------------T----T---C---CT--T---C--------------TT---CTAGGTTCATT-TCCAGA-CAG------TCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CTATGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14487 148 -     24895 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCGTTGCT-TAT---GTGC--TC--AT---CCGTGCTGCTT-TAAAATGCCT-TTGCGGTG----GC-AG---AGAG--------TA--ATTAACATAGAGAGCCTGGAA-ACTCA-ACTTT-TAGATTTT----ATTAATGAGC-----T-----G-----A
i Eulemur_albifrons.k141_51491                           I 1 C 0
s Eulemur_collaris.k141_601111                               42196 148 -     70999 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCGTTGCT-TAT---GTGC--TC--AT---CCGTGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAACATATAGAGCCTGGAA-ACTCA-ACTTT-TAGATTTT----ATTAATGAGC-----T-----G-----A
i Eulemur_collaris.k141_601111                           I 1 C 0
s Eulemur_coronatus.k141_384460                              86158 148 +    112731 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ATG------TCT-CT-TTTCGTTGCT-TAT---GTGC--TC--AT---CCATGCTGCTT-TAAAATGCCT-TTGCGGTG----GC-AG---AGAG--------TA--ATTAACATATAGAGCCTGGAG-ACTCA-ACTTT-TAGATTTT----ATTAATGAGC-----T-----G-----A
i Eulemur_coronatus.k141_384460                          I 1 C 0
s Eulemur_flavifrons.k141_433119                             42727 148 +     68309 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCGTTGCT-TAT---GTGC--TC--AT---CCGTGCTGCTT-TAAAATGCCT-TTGCAGTG----GC-AG---AGAG--------TA--ATTAACATATAGAGCCTGGAA-ACTCA-ACTTT-TAGATTTT----ATTAATGAGC-----T-----G-----A
i Eulemur_flavifrons.k141_433119                         I 1 C 0
s Eulemur_fulvus.k141_636316                                 53053 148 -     65740 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCGTTGCT-TAT---GTGC--TC--AT---CCGTGCTGCTT-TAAAATGCCT-TTGCGGTG----GC-AG---AGAG--------TA--ATTAACATATAGAGCCTGGAA-ACTCA-ACTTT-TAGATTTT----ATTAATGAGC-----T-----G-----A
i Eulemur_fulvus.k141_636316                             I 1 C 0
s Eulemur_macaco.k141_1562045                                23682 148 -     75513 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCGTTGCT-TAT---GTGC--TC--AT---CCGTGCTGCTT-TAAAATGCCT-TTGCAGTG----GC-AG---AGAG--------TA--ATTAACATATAGAGCCTGGAA-ACTCA-ACTTT-TAGATTTT----ATTAATGAGC-----T-----G-----A
i Eulemur_macaco.k141_1562045                            I 1 C 0
s Eulemur_mongoz.k141_232305                                 47880 148 -     97555 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ATG------TCT-CT-TTTCGTTGCT-TAT---GTGC--TC--AT---CCATGCTGCTT-TAAAATGCCT-TTGCGGTG----GC-AG---AGAG--------TA--ATTAACATATAGAGCCTGGAA-ACTCA-ACTTT-TAGATTTT----ATTAATGAGC-----T-----G-----A
i Eulemur_mongoz.k141_232305                             I 1 C 0
s Eulemur_rubriventer.k141_1423786                            4604 148 +     30972 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TTGCAATG----GC-AG---AGAG--------TA--ATTAACATATGGAGCCTGGAA-ACTCA-ACTTT-TAGATTTT----ATTAATGAGC-----T-----G-----A
i Eulemur_rubriventer.k141_1423786                       I 1 C 0
s Eulemur_rufus.k141_514691                                  42324 148 -     52037 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCGTTGCT-TAT---GTGC--TC--AT---CCGTGCTGCTT-TAAAATGCCT-TTGCGGTG----GC-AG---AGAG--------TA--ATTAACATATAGAGCCTGGAA-ACTCA-ACTTT-TAGATTTT----ATTAATGAGC-----T-----G-----A
i Eulemur_rufus.k141_514691                              I 1 C 0
s Eulemur_sanfordi.k141_1122526                              58726 148 -    111500 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCGTTGCT-TAT---GTGC--TC--AT---CCGTGCTGCTT-TAAAATGCCT-TTGCGGTG----GC-AG---AGAG--------TA--ATTAACATAGAGAGCCTGGAA-ACTCA-ACTTT-TAGATTTT----ATTAATGAGC-----T-----G-----A
i Eulemur_sanfordi.k141_1122526                          I 1 C 0
s Felis_catus.CM001381.2                                 186246524 151 - 206538554 t-------------a--t--t------------------t----t---t---t-------------------ttctt---ctaggttcATTTTCTAGA-GAA------TCT-CT-TTTCATTGCT-TGT---GTGC--TT--AT---CTGTGCATATT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATACAGCCTGGAA-Actca-acttt-taaatttt----attaatgagC-----T-----A-----A
i Felis_catus.CM001381.2                                 C 0 I 5
s Felis_catus_fca126.CM031415.1                          185116310 151 - 205367284 t-------------a--t--t------------------t----t---t---t-------------------ttctt---ctaggttcATTTTCTAGA-GAA------TCT-CT-TTTCATTGCT-TGT---GTGC--TT--AT---CTGTGCATATT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATACAGCCTGGAA-Actca-acttt-taaatttt----attaatgagC-----T-----A-----A
i Felis_catus_fca126.CM031415.1                          C 0 I 5
s Felis_nigripes.FelNig_flattened_line_31944                 27407 151 -     30238 T-------------A--T--T------------------T----T---T---TT--T---C--------------TT---CTAGGTTCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TT--AT---CTGTGCATATT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATACAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----A-----A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 5
s Fukomys_damarensis.KN121974.1                            2916160 117 -   3816255 ------------------------------------------------------------------------------------------------------------tct-ct-tttcattgtt-tat---atgC--TC--AT---TTGTGCTGATT-TAAATTACCT-CAGTGGTG----G-CAG---AGAG--------CA--ATTAGCACACAGAACCTGGAA-actca-acttt-taaatttt----attcatgagC-----C-----T-----A
i Fukomys_damarensis.KN121974.1                          I 26 C 0
s Galago_moholi.ctg3793                                     124725 148 -    137831 T-------------T--C--T-----------------TC----T---T---C----------------------TT---CGAGGTGCCTT-TCCAAA-ACA------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AC---TGGTGCTCCCT-TGAAGTACCT-CCATGGTG----GC-AG---AGTG--------TA--ATTAGCACATGGCTCCTGGAA-ACTCA-ACTTT-TAAATCAT----ATTAATAAGC-----T-----G-----A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8270 148 +     22493 T-------------T--C--T-----------------TC----T---T---C----------------------TT---CGAGGTGCCTT-TCCAAA-ACA------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AC---TGGTGCTCCCT-TGAAGTACCT-CCATGGTG----GC-AG---AGTG--------TA--ATTAGCACATGGCTCCTGGAA-ACTCA-ACTTT-TAAATCAT----ATTAATAAGC-----T-----G-----A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20345 145 -     32986 --------------------G-----------------CC----T---T---C----------------------TT---CGAGGTGCCTT-TCCAAA-ACA------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AC---TGGTGCTGCCT-TGAAGTACCT-CCATGGTG----GC-AG---AGTG--------TA--ATTAGCACATGGCTCCTGGAA-ACTCA-ACTTT-TAAATCAT----ATTAATAAGC-----T-----G-----A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                 883 147 -     28519 T-------------T--T--T-----------------CC----T---T---C----------------------TT---CAAGGTTCA-T-TCTGGA-CAG------TCT-AT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGATT-TAAAATGCCT-AAGTGGTA----GC-AC---AGAG--------TA--ATTATCACGTAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91140 151 -     95226 -----------------t--t------------------t----t---c---t-------------------ttctt---ctaggtTCATT-TCCAGA-CAA------TCT-CT--TTCATTACT-TGT---GTGT--TC--AT---CTTTACAG-TA-TAAAATGCCT-TAGTGGTG----GC-AG---AAAG--------TA--ATTAGCATATAGAGCCTGGAA-TCTCA-ACTTT-TAAATTGT----ATTAATGAGC-----C-----GATTTGA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 3 C 0
s Glis_glis.GliGli_scaffold_33859                            34205 151 -     36801 T-------------T--C--C-----------------CC----T---C---T--CT---C--------------TT---TCAGCTTCATT-TCTGGA-CAG------TCT-CT-TTTCATTGCT-CAT---GTGC--TC--AT---CTGTGCTGATT-TAAAATGCCT-TCGTAGTA----GC-AG---AGCA--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Glis_glis.GliGli_scaffold_33859                        I 3 C 0
s Gorilla_beringei.k141_3358147                               5527 146 -      8343 T-------------T--T--T------------------C----T---T---T----------------------TT---CAAGGTTTATT-TGTGGA-AAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254541 147 - 186649187 t-------------t--t--t-t----------------c----t---t---t----------------------tt---caaggtttATT-TGTGGA-AAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGGAa-ac-ca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1697 153 -     78134 T-------------T--T--C-----------------CC----T---C-TTT--C----C----------C---TT---TCTGCTTCATT-TCTGGA-CAG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGATT-TAAAATGCCT-TTGTGGTA----GC-AC---AGCA--------TA--ATTAGCATATAGAGCCTAGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Hapalemur_alaotrensis.k141_330369                          14412 148 -     40692 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGATGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTGTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Hapalemur_alaotrensis.k141_330369                      I 1 C 0
s Hapalemur_gilberti.k141_646465                             35814 148 +     49394 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGATGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTGTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Hapalemur_gilberti.k141_646465                         I 1 C 0
s Hapalemur_griseus.k141_763500                              60682 148 -     66874 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGATGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTGTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Hapalemur_griseus.k141_763500                          I 1 C 0
s Hapalemur_meridionalis.k141_258450                          9556 148 -     42923 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGATGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTGTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Hapalemur_meridionalis.k141_258450                     I 1 C 0
s Hapalemur_occidentalis.k141_578367                         16556 148 -     53142 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGATGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTGTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Hapalemur_occidentalis.k141_578367                     I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30487 154 -    327341 T-------------T--T--T------------------T----T---C---CT-C----CT---------CC--TT---CTAGGTTCATTTCCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGGACTTT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATACAGCCTGGAA-ATTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----A-----A
i Helogale_parvula.HelPar_flattened_line_2585            I 2 I 5
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8829 146 +     48891 ----------------------------------------------------TT--T---C--------------TT---CTAGGTTCATT-TCCAGA-CAA------TCT-CT--TTCATTTCT-TGT---GTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTA----GC-AG---AAAG--------TA--ATTAGCACATAGAGCCTGGAA-TCTCA-ACTTT-TAAATTTT----ATTAATGAGC-----C-----GATTTGA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 15 I 3
s Heterocephalus_glaber.JH602082.1                         1932127 119 -  22651954 ------------------------------------------------------------------------------------------------------------tct-ct-tttcattgtT-TAT---GTGC--TC--AT---TGGTGCTGATT-TAAAATACCT-TATTGGTG----G-CAG---AGAG--------TAAAATTAGCAGACAGAACGTGGAa-actca-acttt-taaatttt----attaatgagC-----T-----T-----A
i Heterocephalus_glaber.JH602082.1                       I 26 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                 118 177 +      4291 T-------------T--T--A-----------------TT----TA--C---TTACTGTTCTTTTTTTTAACCTCTT---TTGGGTTTACT-TCTCGG-TGG------TCT-CT-TTTTGTTGCT-TTTTGCGTGC--CC--AT---CTGTGCAGATT-TAAAAAGCCT-T-GTGGTGGGGGGT-GG---G-GG--------GT--GTTAATGTACAGGACGGGAAA-TGCCA-ACTTTTTTAATGTT----ATTAATGAGC-----T-----G-----A
i Heterohyrax_brucei.HetBruBak_scaffold_154059           N 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7339 146 -     36432 T-------------T--T--T------------------T----T---C---CT--T---C--------------TT---CTGGGTTCATT-TCCA-----G------TCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CTCTGCATATT-TAAAATGCCT-TAATGGTG----GC-AC---AGAG--------TA--ATTAGCATAGAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 5
s Hipposideros_armiger.JXIK01000431.1                      1553861 143 -   1711038 a------------at--t--t------------------t----t---t---t----------------tttttctt---ctaggttCATT-TCTAGA-CAG------CCA-CT-TTTCATTGCT-TAT---ATGC--TC--AT---CGGTGCAGATT-TAAAATGCC-TTAGTGGTG----GC-AG---AGAG--------TA--ATTAA---------CCTGgaa-attca-acttt-taaatttt----attaatgagC-----T------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_164997                792 135 -      2730 ----------------------------------------------------TT--T-TT-T---------C---TT---CTAGGTTCATT-TCTAGA-TAG------CCA-CT-TTTCATTGCT-TAT---ATGC--TC--AT---CAGTGCAAAAT-TAAAATGCC-TTAGTGGTG----GC-AG---AGAG--------TA--ATTAA---------CCTGGAA-ATTCA-ACTTT-TAAATTTT----ATTGATGAGC-----T------------
i Hipposideros_galeritus.HipGal_scaffold_164997          I 7 I 2
s Hoolock_leuconedys.ctg274                                    142551 147 -    630532 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTATT-TGTGGA-CAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGTTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69403 154 +     83186 T-------------T--T--T------------------T----T---T---CT--T---CTT--------C---TT---CTAGGTTCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCACATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATACAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAAC-----T-----A-----A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 5
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71597 116 +    143317 ------------------------------------------------------------------------------------------------------------TCT-CT-TTTCCTTGCT-TAA---ATGC--TC--AT---CTGTGCTGATT-TAAAATACCT-TAGTAGTG----G--TG---AGAG--------TA--ATTAGCATACAGAACCTGGAA-ACTCA-CTTTC-TACATTTT----ATTAATGAGC-----C-----T-----A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 25 C 0
s Hylobates_agilis.k141_1155965                               5585 147 +     12352 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTATT-TGTGGA-CAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGGAA-AC-CG-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              12769 147 +     55766 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTATT-TGTGGA-CAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGGAA-AC-CG-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052369 147 + 191637585 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTATT-TGTGGA-CAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGGAA-AC-CG-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801247 147 +  11177569 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTATT-TGTGGA-CAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGGAA-AC-CG-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4198 153 -    135385 -----------------C--C-----------------CC----TAGTC---T--C----CT---------C---GT---TTAGGTTCATT-TCTGGA-CAG------TCT-CT-TCTCACTGCT-TAA---ATGC--TC--AT---CTGTGCTGATT-TAAAATACCT-TAGTGGTA----GC-TG---GGAG--------TA--ATTAGCATAGAGAACCTAGAA-ACTCA-ACGTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386546 158 +   7955117 ttttt-----aag-t--t--c-t----------------t----t---c---t-------------------ctttt---tcggGTTCATT-TCTGGA-CAG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGATT-TAAAATGCCT-TAGTGGTA----GC-AG---AGGG--------TA--ATTAGCATCGAGAGCCTGGAA-actca-acttt-taaatttt----attaatgagC-----T-----A-----A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2112 148 +     11955 T-------------T--T--T-----------------TC----C---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CCGTGCTGCTT-TAAAATGCCT-TCCCAGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCCGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Indri_indri.k141_2415743                               I 6 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                3311 150 -     16823 T-------------T--T--A------------------T----T---C---CT--T---C--------------TT---CTAGGTTCATT-TCCAGA-CAG------TCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CTATGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGGG--------TA--ATTATCATATAGAGCCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1239545 146 +   9596543 ---------------------------------------T----T---T---C----G--CT-------------GT---CTAGGTTCATT-TCTGGA-CGG------TCT-CT-TTTCACTGCT-TAT---GTGC--TT--AC---CTGTGCTGACTTTAAATCACCT-TAGTGGTG----GC-AG---AGAA--------TA--ATTAGCATATAGAA-CTGGAA-ATTCA-ACTTT-TAAACTTG----ATTAGTGAAC-----T-----G-----A
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65551 152 -     97402 T-------------T--T--T------------------T----T---CC-CCT--T---C--------------TT---CTAGGTTCATT-TCCAGA-CAG------TCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CTATGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Kogia_breviceps.KogBre_flattened_line_3970             I 9 C 0
s Lagothrix_lagothricha.k141_246028                          42985 146 +    110728 T-------------T--T--T------------------C----T---T---T----------------------TT---CGAGGTTTGTA-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    31877 147 -     49555 A-------------T--T--T-----------------TT----T---T---CT--T---CT---------CC--TG---CTACGTTCATT-TCCAGA-CAGTC--AGTCT-CT-TTTCGTTGCT-TGC---CTGC--TC--AT---CTGTGTAGATT-TAAAATGCCT-TAGTGGTG----GC-AG-----AG--------TA--ATTAG---------CTTGGAA-ACTCA-ACTTT-TATATTTT----ATTGATGAGC-----T-----G-----A
i Lasiurus_borealis.LasBor_scaffold_26245                I 49 I 35
s Lemur_catta.scaffold_24                                 14759205 148 +  30322482 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGATGTTCCTT-TCTGGA-ATG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CCGTGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTGTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Lemur_catta.scaffold_24                                I 1 C 0
s Leontocebus_fuscicollis.k141_2994775                        3898 147 -     13097 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CCAAGTTTGTT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAC---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCAT-TCGTGGTG----GC-GG---AGAG--------TA--ATTAGCATGCAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3652 147 +      5940 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CCAAGTTTGTT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAC---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCAT-TCGTGGTG----GC-GG---AGAG--------TA--ATTAGCATGCAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3482 147 -      5717 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CCAAGTTTGTT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAC---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCAT-TCGTGGTG----GC-GG---AGAG--------TA--ATTAGCATGCAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                     9858 146 -     11567 T-------------C--T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTATT-TCTGGA-TAG------TCG-GT-TTTCATTGCT-TAC---GCGC--TC--AT---CTATGCTGCTT-TAAAATGCGT-TCGTGGTG----GC-CG---AGAG--------TA--ATTAGCATGTACAGTCTG-AA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11239 146 -     12945 T-------------C--T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTATT-TCTGGA-TAG------TCG-GT-TTTCATTGCT-TAC---GCGC--TC--AT---CTATGCTGCTT-TAAAATGCGT-TCGTGGTG----GC-CG---AGAG--------TA--ATTAGCATGTACAGTCTG-AA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8716 148 +     29618 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CCGTGCTGCCT-TAAAATGCCT-TTGCGGTG----GT-AG---ACAG--------TA--ATTAGCATATAGAACCTGGAA-ACTCA-GCTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Lepilemur_ankaranensis.k141_567626                     I 6 C 0
s Lepilemur_dorsalis.k141_387009                              8712 148 +     31569 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CCGTGCTGCTT-TAAAATGCCT-TTGCGGTG----GT-AG---ACAG--------TA--ATTAGCATATAGAACCTGGAA-ACTCA-GCTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Lepilemur_dorsalis.k141_387009                         I 6 C 0
s Lepilemur_ruficaudatus.k141_330196                          8722 148 +     24756 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CCGTGCTGCTT-TAAAATGCCT-TTGCGGTG----GT-AG---ACAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-GCTTT-TAAATTTT----ATTAATGAGA-----T-----G-----A
i Lepilemur_ruficaudatus.k141_330196                     I 6 C 0
s Lepilemur_septentrionalis.k141_360456                       8722 148 +     16388 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CCGTGCTGCTT-TAAAATGCCT-TTGCGGTG----GT-AG---ACAG--------TA--ATTAGCATATAGAACCTGGAA-ACTCA-GCTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Lepilemur_septentrionalis.k141_360456                  I 6 C 0
s Leptonychotes_weddellii.KB714746.1                        813223 149 -   3914936 --------------------t--------a---------t----t---t---t-------------------ttgtt---ctaggTTCGTTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAGATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATAGAGCCTGGAA-actca-acttt-taaatttt----attaatgagC-----T-----A-----A
i Leptonychotes_weddellii.KB714746.1                     I 6 I 5
s Lepus_americanus.LepAme_scaffold_56121                     17579 152 +     24238 T-------------C--T--T-----------------CT----C---C---T--C----C----------C---AC---TCAGGTTCACT-TCTGGA-CAA------TCT-TTTATTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Lepus_americanus.LepAme_scaffold_56121                 I 1 C 0
s Lipotes_vexillifer.KE559953.1                             334839 150 +    662738 t-------------t--t--t------------------t----t---c---c-------------------ttctt---gtagGTTCATT-TCCAGA-TAG------TCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CTATGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTC-TAAATTTT----ACTAATGAGC-----T-----G-----A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333606 145 -   1826925 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10308 141 +     19643 ------------------------------------------------T---C----------------------TT---CGAGGTGCTTT-TCCAAA-ACA------TCT-CT-TTTAATTGCT-TAT---GTGC--TC--AC---TGGTGCTGCCT-TGAAGTACCT-CCATGGTA----GC-AG---AGTG--------TA--ATTAGCACATGGCTCCTGGAA-ACTCA-ACTTT-TAAATCAT----ATTAATAAGC-----T-----G-----A
i Loris_lydekkerianus.k141_2031736                       I 4 C 0
s Loris_tardigradus.ctg83                                  5043971 141 -   6120653 ------------------------------------------------T---C----------------------TT---CGAGGTGCTTT-TCCAAA-ACA------TCT-CT-TTTAATTGCT-TAT---GTGC--TC--AC---TGGTGCTGCCT-TGAAGTACCT-CCATGGTA----GC-AG---AGTG--------TA--ATTAGCACATGGCTCCTGGAA-ACTCA-ACTTT-TAAATCAT----ATTAATAAGC-----T-----G-----A
i Loris_tardigradus.ctg83                                I 4 C 0
s Loxodonta_africana.GL010049.1                           39080735 158 +  43346337 t-------------t--t--a-t----------------t----t--at---t----------------ttcctctt---ctaGGTTTATT-TCTAGG-TGG------TCT-CT-CTGCATTGct-tgttgtgtgt--gt--gt---ctgtgtagacT-TAAAATGCCT-TAGTGATG----GT-AG---GGAG--------GA--ATTAGCAGACAGAGCCTGGAA-ACtca-gcttt-ttaatttt----attaatgagC-----T-----G-----G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614360 151 +  59628241 t-------------t--t--t------------------t----t---t---c-------------------ttctt---cttggttCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAACTGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAACACATAGAGCCTGGaa-actta-acttt-taaatttt----attaatgagC-----T-----A-----A
i Lycaon_pictus.CM007581.1                               C 0 I 5
s Macaca_arctoides.k141_1757516                              45000 145 -     61512 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATAGAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372662 145 -  60120075 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                24925 145 +     30207 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           22028 145 -     24934 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 24878 145 +     30527 -----------------T--T-----------------TC----T---T---T----------------------GT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36054 145 -     50087 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCATGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----A-----G-----A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45798 145 +     51645 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415000 145 - 187317192 -----------------t--t-t----------------c----t---t---t----------------------tt---caaggtttgTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-Ac-ca-acttt-tacatttt----attaatgagC-----T-----G-----A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399231 145 +  25927173 -----------------t--t-t----------------c----t---t---t----------------------tt---caaggtttgtT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-Ac-ca-acttt-tacatttt----attaatgagC-----T-----G-----A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48403 145 -     62418 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                  941 145 +     14901 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 44875 145 +     59329 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270783 145 +    668171 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCATGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----A-----G-----A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                 1059 145 +      1732 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2581 145 +     17132 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                222913 148 -    270270 T-------------T--T--T------------------T----T---T---CT--T---CTT--------C---TA---CTTGGTTCATT-TCTAGA-CAG------TGT-CT-TTTCATTTCT-TGA---GTGC--TC--AT---CAATGCTGATT-TAAAACGCT--TAAGTATG----AT-AG---AGGG--------TA--TTTAG---------CTCAGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAAC-----TGAGTTG-----A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322070 145 +  24302211 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               356901 145 -    752769 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673318  87 -    737560 ------------------------------------------------------------------------------------------------------------------------------------------------------tGCAGATT-TA-AATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGTGTATATAGCCCAGAA-ACTca-acttc-taaatttt----attaatgAGC-----T-----G-----A
i Manis_javanica.JSZB01003497.1                          I 54 I 5
s Manis_pentadactyla.KN006162.1                             220555 149 +    317179 -----------------t--t------------------t----t---t---c-------------------ttctt---ctaaatcCGTT-TCTAGACAAg------tct-ct-tttcatttct-tgt---gtGC--TT--AT---CTGTGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGTGTATATAGCCCAGAA-ACTCa-acttc-taaatttt----attaatgAGC-----T-----G-----A
i Manis_pentadactyla.KN006162.1                          I 3 I 5
s Marmota_marmota.CZRN01000018.1                           7500766 158 +  40650429 ttttt------aaat--t--c-t----------------t----t---c---t-------------------ctttt---tcaggtTCATT-TCTGGA-CAG------TCT-CT-TTTCATTGCT-TAG---GTGC--TC--AT---CTGTGCTGATT-TAAAATGCCT-TAGTGGTA----GC-AG---AGGG--------TA--ATTAGCATCGAGAGCCTGGAA-actca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150105 145 +    207569 -----------------T--T------------------T----T---C---CT-C----CT---------CC--TT---CTAGGTTCATT-TCTAAA-CAG------TCT-TT-CTTCACTGCT--GT---ATGC--TC--AT---GTGTGCAGATT-TAAAATGCC--TAGTGGTG----GC-AG---AGAG--------TA--ATTAG---------ACTGGAA-ATTCA-ACTTT-TAAATGTT----ATTAATGAGC-----TGAGTTG-----A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             25910 150 -     74585 T-------------T--T--T------------------T----T---C---CT--T---C--------------TT---CTAGGTTCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATAGAGCCTGGAA-ACT-A-ACTTT-TAAATTTT----ATTAATGGGC-----T-----A-----A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 5
s Meriones_unguiculatus.MerUng_scaffold_7390                 49883 150 -    140813 T-------------C--C--T-----------------TC----T---T---T--CT---C--------------TT---TCAGGTTTATT-TCTCTA-CAG------TCT-CC-TTTCATTGTT-TAT---ATGC--TT--AC---CTGTGCTGATT-TAAATTGCCT-TAGTGGCA----TG-A----AGAA--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-TCAATTTT----ATTAATGAGC-----T-----G-----A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17428981 151 +  29670104 G-------------C--C--C-----------------CC----T---T---C--CT---C--------------TT---TCAGGTTCATT-TCTCAA-CAG------TCT-CC-TTTCCTTGTT-TAT---GTGC--TT--AC---CTGTGCTAATT-TCAATCGCCT-TAGTGGCA----GC-AG---AGAA--------TA--ATTAGCATAGAGAGCCTGGAA-ACTCA-ACTTT-TCAATGTT----ATTAATGAGC-----T-----G-----A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     81138 150 +     93471 T-------------T--T--T------------------T----T---C---CT--T---C--------------TT---CTAGTTTCATT-TCCAGA-CAA------TCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CTATGCAGATT-TAAAATGCCT-TAGTGGGG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10023 147 +     17804 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-GAG------TCA-GT-TTTCATTGCT-TAC---GCAC--TC--AT---CTATGCTGCTT-TAAAATGTGT-TCGTGGTG----GC-CG---AGAG--------TA--ATTAGCATGTACAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10525 146 -     12984 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-GAG------TCA-GT-TTTCATTGCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGTGT-TCGTGGTG----GC-TG---AGAG--------TA--ATTAGCGTGTACAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G------
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18839 147 -     26561 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-GAG------TCA-GT-TTTCATTGCT-TAC---GCAC--TC--AT---CTATGCTGCTT-TAAAATGTGT-TCGTGGTG----GC-CG---AGAG--------TA--ATTAGCATGTACAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984324 148 +  93316391 t-------------t--t--t-t----------------c----t---t---t----------------------tt---tgatgttcCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCGTATT-TAAAATGCCT-TCGTGGTG----GC-GG---AGAG--------TA--ATTAGCATATAGGGCCTGGAA-actca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Microcebus_murinus.CM007674.1                          I 6 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    45869 158 +    145209 A------------TT--T--A-----------------TT----T-G-T---TT-C----C----------C-TCTT---CTAGGTTCCTC-TCTGGA-CAA------CCT-CT-TTGCATTGTT-TACTGTACGC--TC--AT---CTGTACC-CTT-TAAAATAACT-TCTTGGTG----GC-AA---GGAG--------TA--ATTAGCGTATAGAACCTGGA-AACTCA-ACTTT-TTAA----TTTTATTAATGGGT-----G-----G-----A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184787 151 +    200668 A-------------T--T--T------------------T----T---CCTTCT--T---C--------------TT---CCACCTTCATT-TCTAGA-CAG------TCT-CT-CTTCATCGCT-TGT-GTGTGC--TC--AT---CTGTGTAGGTT-TAAAATGCCC-GAGCAGTG----GC-AG---AAAA--------TA--ATTAG---------CCTGCAA-ACTCA-ACTTT-TAAACATT----ATTAATGAGCCAAGTT-----C-----A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962181 152 +  27267610 t-------------t--c--tc-----------------c----t---t---c-------------------ctctt---tcaggTTCATT-TCTCAA-CAG------TCT-CC-TATCGTTGTT-TAT---GTGT--TT--AC---CTGTGCCAATT-TCAATCACCT-TAGTGGCA----AC-AG---AGAA--------TA--ATTAGCGTGTAGAGCCTAGAA-ACTcaaacttt-tcaatttt----attaatgaGC-----T-----G-----A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6362964 144 -   8254450 ------------------------------------------------t---c----------------ttctttct---ctaggtTCATT-TCTAGA-CAGTCTCTTGCT-CT-TTTCAGTGCT-TGT---GTGC--TC--AT---CTGTGCAAATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAG---------CCTGGAA-ACTCa-actta-taaatttt----attaatgagC-----T-----G-----A
i Miniopterus_natalensis.LDJU01000034.1                  I 3 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             41871 144 -     48117 ------------------------------------------------T---CT--T---CTT--------C---CT---CTAGGTTCATT-TCTAGA-CAGTCTCTTTCT-CT-TTTCAGTGCT-TGT---GTGC--TC--AT---CTGTGCAAATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAG---------CCTGGAA-ACTCA-ACTTA-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 3 C 0
s Miopithecus_ogouensis.k141_1534655                         22087 145 -     27822 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTGGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGGCT-TCATGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATGTT----ATTAATGAGC-----T-----G-----A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8230 153 +     27589 T-------------A--T-TT-----------------AT----T---T---TT--TG-----------------TT---CTAGGTTCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAGATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----A-----A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 5
s Mirza_zaza.k141_766280                                     52120 148 -     62432 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TGTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CCGTGTGGATT-TAAAATGCCT-TCGTGGTG----GC-GG---AGAG--------TA--ATTAGCATATGGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Mirza_zaza.k141_766280                                 I 6 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   353237 150 +    437263 T-------------T--T--T------------------T----T---C---CT--T---C--------------TT---CTAGGTTCATT-TCCAGA-CAG------TCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CTATGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179012 149 +    366855 A-------------T--T--T------------------T----T---TCTTCT--T---C--------------TC---CTACATTCATT-TCTAGA-GAG------TCT-CT-CTTCGTTGCT-GGT---GTGC--TC--AT---CTGTGTCGGTT-TAAGATGCTT-TAGTGGTG----GC-AG---AAAA--------TA--ATTAG---------CCTGGAA-ACTCA-ACGTT-TAAATATT----ATTAATGAGGCGAACT-----G-----A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25255 157 -     82753 T---------TTTTT--T--T------------------T----T---C---TT--T---C--------------TT---CTAGGTTCATT-TCCAGC-CAA------TCT-CT--TTCATTTCT-TGT---GTGT--TC--AT---CTTTGCAG-TA-TAAAGTGCCT-TAGTGGTG----GC-AG---AAAG--------TA--ATTAGCATATAAAGCCTGGAA-TCTCA-ACTTT-TAAATTTT----ATTAATGAGC-----C-----GATTTGA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18238 154 -     63510 T-------------T--T--T------------------T----T---C---CT-C----CTT--------C---TT---CTAGGTTCATTTCCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGGACATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATACAGCCTGGAA-ATTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----A-----A
i Mungos_mungo.MunMun_flattened_line_18455               I 2 I 5
s Murina_feae.MurFea_scaffold_17764                          38928 145 +     47283 A-------------T--T--T------------------T----T---T---CT--T---C--------------TT---CTAGGTTCATT-TCTAGA-CAGTC--AGTCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGTAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAG---------CCTGGGA-ACTCA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Murina_feae.MurFea_scaffold_17764                      I 1 C 0
s Mus_caroli.LT608237.1                                   35592909 146 + 120012414 ---------------------------------------c----t---t---c-------------------ctctt---tcaggTTCATT-TCTCTA-CAG------TCT-CC-TTTCATTGTT-TAT---ATGC--TT--AC---CTGTGCTGATT-TAAATTGCCT-TCCTGGCA----GC-AG---AGAA--------TA--ATTAGCATATAGAGCCTGAAA-ACtca-acttt-tcaatttt----attaatgaGC-----T-----G-----G
i Mus_caroli.LT608237.1                                  I 6 C 0
s Mus_musculus.chr8                                       41687295 146 + 129401213 ---------------------------------------c----t---t---c-------------------ctctt---tcaggttcatt-tctCTA-CAG------TCT-CC-TTTCATTGTT-TAT---ATGC--TT--AC---CTGTGCTGATT-TAAATTGCCT-TCGTGGCA----GC-AG---AGAA--------TA--ATTAGCATATAGAGCCTGAAA-ACTca-acttt-tcaatttt----attaatgAGC-----T-----G-----G
i Mus_musculus.chr8                                      I 7 C 0
s Mus_spretus.CM004101.1                                  39496587 146 + 130317789 ---------------------------------------c----t---t---c-------------------ctctt---tcaggtTCATT-TCTCTA-CAG------TCT-CC-TTTCATTGTT-TAT---ATGC--TT--AC---CTGTGCTGATT-TAAATTGCCT-TCGTGGCA----GC-AG---AGAA--------TA--ATTAGCATATAGAGCCTGAAA-ACtca-acttt-tcaatttt----attaatgaGC-----T-----G-----G
i Mus_spretus.CM004101.1                                 I 4 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83045 137 -     86153 --------------------------------------------------------------------------------TCAGCCTAATT-TCTGGA-CAG------TCT-CT-TTTCATTGCT-TAC---GTGC--TC--CT---CTGTGCTTATT-TAAAATATCT-TCCTGGTA----GC-AG---GGCA--------TA--ATTAGCACATAGAGTCTGGAA-ATGCA-ACATC-TAAGTTTT----ATTAATGAGC-----T-----G-----G
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 14 C 0
s Mustela_putorius.JH418006.1                             14354845 152 +  14710649 t-------------t-tt--t------------------t----t---c---c-------------------ttctt---ctgggtTCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATAGAGCTTGGAA-actca-acttt-taaatttt----attaatgggC-----T-----A-----A
i Mustela_putorius.JH418006.1                            C 0 I 5
s Myocastor_coypus.MyoCoy_scaffold_15261                     62894 116 +     67721 ------------------------------------------------------------------------------------------------------------TCT-CT-TTTCCTTACT-TAA---GTGT--TC--AT---CTGTGCTGATT-TAAAACACCT-TAGTGATT----G--TG---AGAG--------TA--ATTAGCATACAAAACTGGGAA-ACTCA-ACTTC-TAAATTTC----ATTAATGAGC-----C-----T-----A
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 26 C 0
s Myotis_brandtii.KE162005.1                               9793214 148 +  10118263 a-------------t--t--t------------------t----t---t---c----------------ttcttctt---ctaggtTCATT-TCTAGA-CAGAC--AGTCT-CT-TTTCATTGCT-TGC---GTGC--TC--AT---CTGTGTAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAG---------CCTGGAA-ACtca-acttt-tacatttt----attaatgagC-----T-----G-----A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387344 148 +   6019432 a-------------t--t--t------------------t----t---t---c----------------ttcttctt---ctaggtTCATT-TCTAGA-CAGTC--AGTCT-CT-TTTCATTGCT-TGC---GTGC--TC--AT---CTGTGTAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAG---------CCTGGAA-ACtca-acttt-tacatttt----attaacgAGC-----T-----G-----A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383171 148 +   4330536 a-------------t--t--t------------------t----t---t---c----------------ttcttctt---ctaggtTCATT-TCGAGA-CAGAC--AGTCT-CT-TTTCATTGCT-TGC---GTGC--TC--AT---CTGTGTAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAG---------CCTGGAA-ACtca-acttt-tacatttt----attaatgagC-----T-----G-----A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         1980 148 +     18357 A-------------T--T--T------------------T----T---T---CT--T---CTT--------C---TT---CTAGGTTCATT-TCTAGA-CAGTC--AGTCT-CT-TTTCATTGCT-TGC---GTGC--TC--AT---CTGTGTAGATT-TAAAATGCCT-TAGTGGCG----GC-AG---AGAG--------TA--ATTAG---------CCTGGAA-ACTCA-ACTTT-TACATTTT----ATTAATGAGC-----T-----G-----A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119489 143 +    130748 ------------------------------------------------T---CT--T---C--------------TT---CTAAGTTCATT-TCTAGA-CAG------TCT-CC-TTTCAGTG-T-TGT---GTGC--TT--GT---CTGTGCAGATT-TAAAATGCCT-TAATGATT----GC-AG---GAAG--------TA--ATTAGCATAGAGAGCCTGGAA-ACTCA-TCTTT-TAAATTGT----ATTAATGAGC-----A-----G-----A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 9 C 0
s Nannospalax_galili.KL204047.1                             946042 126 +   3037898 --------------------------------------------------------------------------------------------TCTGGA-CAG------TCT-CT-TTCCACTGCT-TAC---GTGT--TC--AC---CTGTGCTGATT-TAAATTGCCT-TAGTGGCG----GT-AG---AGAA--------TA--ATTAACATACAGAGCCTGGAA-actca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Nannospalax_galili.KL204047.1                          I 10 C 0
s Nasalis_larvatus.k141_1350636                              28725 145 +     34575 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGAA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCATGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1227407 150 -   7148211 t-------------t--t--t------------------t----t---c---c-------------------ttctt---ctaggTTCATT-TCCAGA-CAG------TCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CTATGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   127948 153 -    149072 A-------------T--T--T------------------C----T---G---CT--T---C--------------TT---CTGCATTCATT-TCTTGA-CAG------TCT-C-----CATTGCA-TGT---GTGC--TC--AT---CTGTGTAGGTT-TCAAATGCCT-TAGTGGTG----GC-AGTCTAAAATGCCTTAGTA--ATAAG---------CCTGGAA-ACTCC-ACTTT-TAAATTTT----ATTAATGAGCCAAGTT-----G-----A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53477 147 -    132029 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTATT-TGTGGA-CAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGGAA-AC-CG-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Nomascus_annamensis.k141_1771965                       I 3 C 0
s Nomascus_concolor.k141_735679                               9572 147 -     16345 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTATT-TGTGGA-CAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGGAA-AC-CG-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Nomascus_concolor.k141_735679                          I 3 C 0
s Nomascus_gabriellae.k141_57920                             15457 147 +     22201 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTATT-TGTGGA-CAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGGAA-AC-CG-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Nomascus_gabriellae.k141_57920                         I 3 C 0
s Nomascus_siki_b.tarseq_93                            8413678 147 -  22158432 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTATT-TGTGGA-CAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGGAA-AC-CG-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Nomascus_siki_b.tarseq_93                          I 3 C 0
s Nomascus_siki_a.k141_941534                                  25855 147 -     54323 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTATT-TGTGGA-CAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGGAA-AC-CG-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Nomascus_siki_a.k141_941534                              I 3 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                197954 151 +   9404916 t-------------t--t--t------------------t----t---t---c-------------------ttctt---cttggttCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAATACATAGAGCCTGGAa-actta-acttt-taaatttt----attaatgagC-----T-----A-----A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 5
s Nycticebus_bengalensis.LG01                             93636326 148 + 196305487 T-------------T--C--T-----------------TC----T---T---C----------------------TT---CGAGGTGCCTT-TCCAAA-ACA------TCT-CT-TTTAATTGCT-TAT---GTGC--TC--AC---TGGTGCTGCCT-TGAAGTACCT-CCATGGTG----GC-AG---AGTG--------TA--ATTAGCACATGGCTCCTGGAA-ACTCA-ACTTT-TAAATCAT----ATTAATAAGC-----T-----G-----A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3080 148 -      3937 T-------------T--C--T-----------------TC----T---T---C----------------------TT---CGAGGTGCCTT-TCCAAA-ACA------TCT-CT-TTTAATTGCT-TAT---GTGC--TC--AC---TGGTGCTGCCT-TGAAGTACCT-CCATGGTG----GC-AG---AGTG--------TA--ATTAGCACATGGCTCCTGGAA-ACTCA-ACTTT-TAAATCAT----ATTAATAAGC-----T-----G-----A
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564585 148 - 199412804 T-------------T--C--T-----------------TC----T---T---C----------------------TT---CGAGGTGCCTT-TCCAAA-ACA------TCT-CT-TTTAATTGCT-TAT---GTGC--TC--AT---TGGTGCTGCCT-TGAAGTACCT-CCATGGTG----GC-AG---AGTG--------TA--ATTAGCACATGGCTCCTGGAA-ACTCA-ACTTT-TAAATCAT----ATTAATAAGC-----T-----G-----A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2556704  14 -   3988456 ------------------------------------------------------------------------------------------------------------tat-ct-tttcttttc------------------------------------------------------------------------------------------------------------------------------------------------------------
i Ochotona_princeps.JH802162.1                           I 5994 C 0
s Octodon_degus.JH651603.1                                11054848 111 -  11899542 ------------------------------------------------------------------------------------------------------------tct-tt-tttcctggcT-TAA---GTGT--TC--AT---CTGTGCTGATT-TAAAATACCT-TAGTGACT----G--TG---AGAG--------TA--ATTAGCATA-----CCTGGAA-ACTCA-GCTTC-TAAATTTC----ATTAATGAGC-----C-----T-----A
i Octodon_degus.JH651603.1                               I 26 C 0
s Odobenus_rosmarus.KB229312.1                             1451422 152 +   2017862 t-------------t--t-tt------------------t----t---t---c-------------------ttttt---ctaggttcattttctAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGGAGATT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATAGAGCCTGGAA-Actca-acttt-taaatttt----attaatgagC-----T-----A-----A
i Odobenus_rosmarus.KB229312.1                           C 0 I 5
s Odocoileus_virginianus.KZ100018.1                         436023 160 -    630418 ttt-----------t--t--t-tct--------------t----t---c---t-------------------ttctt---ctaggtTCATT-TCCAGA-caa------tct-ct--ttcattttt-tgt---gtgttttc--at---cTTTGCAG-TA-TAAAATGCCT-TAGTGGTG----GC-AG---AAAG--------TA--ATTAGCATATAGAGCCTGGAA-tctca-acttt-taaatttt----attaatgagC-----C-----GATTTGA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14023 151 +    150152 -----------------t--t------------------t----t---c---t-------------------ttctt---ataggtTCATT-TCCAGA-Caa------tct-ct--ttcatttct-tgt---gTGT--TC--AT---CTTTACAG-TA-TAAAATGCCT-TAGTGGTG----GC-AG---AAAG--------TT--ATTAGCATATAGAGCCTGGAA-tctca-acttt-taaatttt----gttaatgaGC-----C-----GATTTGA
i Okapia_johnstoni.LVCL01S0005463.1                      I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92538 151 -    140218 T-------------T--C--T-----------------CC----T---T---C--CT---C--------------TT---TCAGGTTCATT-TCTCAA-CAG------TCT-CC-TTTCATTGTT-TAT---GTGC--TT--AC---CTGTGCTAATT-TCAATTGCCT-TAGTGGCA----AC-AG---AGAA--------TA--ATTAGCGTATAGAACCTAGAA-ACTCA-ACTTT-TCAATTCT----ATTAATGAGC-----T-----G-----A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3419 151 -     41509 C-------------C--C--C-----------------TC----T---T---T--CT---C--------------TT---TCAGGTTCATT-TCTCAA-CAG------TCT-CC-TTTCATTGTT-TAT---GTGC--TT--AC---CTGTGCTAATT-TAAATTGCCT-TAGTGGCA----GC-CG---AGAA--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-CCAATTTT----ATTAATGAGC-----T-----G-----A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096689 150 +  10937097 t-------------t--t--t------------------t----t---c---GT--T---C--------------TT---CTAGGTTCATT-TCCAGA-CAG------TCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CTATGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13570 127 -     14239 ---------------------------------------------------------------------------TT---CTAGGTTCATT-TCGAGG-CAG------TCT-CT-TTTCATTGTT-TGTTG--TGC--TT--AT---CTGTATGGATT-TAAAATGCTT-TAGTGGTG----GC-AG---GGAG--------TA--ATTAGCATATAGA------A--ACTCA-ACTTT-TT----------ATTAATGAGC-----T-----G-----A
i Orycteropus_afer.OryAfe_flattened_line_171931          I 2 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103372 152 - 174332312 t-------------c--t--tc-----------------t----c---c---t-------------------cccaC---TCAGGTTCACT-TCTGGA-CAA------TCT-TTTTTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-actca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39000 151 +    559221 t-------------t--t--t------------------t----t---t---c-------------------ttctt---cttggttCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAATACATAGAGCCTGGAa-atgta-acttt-taaatttt----attaatgagC-----T-----A-----A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 5
s Otolemur_crassicaudatus.k141_649260                        39887 148 -     51505 T-------------T--C--T-----------------TC----T---T---C----------------------TT---CGAGGTGCCTT-TCCAAA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AC---TGGTGCTCCCT-TGAAGTGCCT-CCATGGTG----GC-AG---AGTG--------TA--ACTAGCACATGGCTCCTGGAA-ACTCA-ACTTT-TAAATCAT----ATTAATAAGC-----T-----G-----A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             352889 148 +   1103335 t-------------t--c--t-t----------------c----t---t---c----------------------tt---cgaGGTGCCTT-TCCAAA-ATG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AC---TGGTGCTCCCT-TGAAGTGCCT-CCATGGTG----GC-AG---AGTG--------TA--ATTAGCACATGGCTCCTGGAA-ACTCA-ACTTT-TAAATCAT----ATTAATAAGC-----T-----G-----A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26403949 146 -  44047080 ----------------------------------------------------t-------------------ttctt---ctaggttcATT-TCCAGA-caa------tct-ct--ttcatttct-tgt---gTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTA----GC-AG---AAAG--------TA--ATTAGCACATAGAGCCTGGAA-tctca-acttt-taaatttt----attaatgagC-----C-----GATTTGA
i Ovis_aries.CM001607.2                                  I 9 I 3
s Ovis_canadensis.OviCan_scaffold_67953                       4468 146 +     17875 ----------------------------------------------------TT--T---C--------------TT---CTAGGTTCATT-TCCAGA-CAA------TCT-CT--TTCATTTCT-TGT---GTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTA----GC-AG---AAAG--------TA--ATTAGCACATAGAGCCTGGAA-TCTCA-ACTTT-TAAATTTT----ATTAATGAGC-----C-----GATTTGA
i Ovis_canadensis.OviCan_scaffold_67953                  I 9 I 3
s Pan_troglodytes.CM009242.2                               1472570 147 - 189151597 t-------------t--t--t-t----------------c----t---t---t----------------------tt---caaggtttatt-TGTGGA-AAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGGAa-ac-ca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24230 151 -    230217 T-------------A--T--T------------------T----T---T---TT--T---C--------------TT---CTAGGTTCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCATATT-AAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATACAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----A-----A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 5
s Panthera_pardus.KV860321.1                              18461556 151 -  18783137 t-------------a--t--t------------------t----t---t---t-------------------ttctt---ctaggttcATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCATATT-AAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATACAGCCTGGAA-actca-acttt-taaatttt----attaatgagC-----T-----A-----A
i Panthera_pardus.KV860321.1                             C 0 I 5
s Panthera_tigris.KE722367.1                               3972215 151 +   8748460 t-------------a--t--t------------------t----t---t---t-------------------ttctt---ctaggttcATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCATATT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATACAGCCTGGAA-Actca-acttt-taaatttt----attaatgagC-----T-----A-----A
i Panthera_tigris.KE722367.1                             C 0 I 5
s Pantholops_hodgsonii.KE114653.1                          1615455 158 +   2937107 tttttt--------t--t--t------------------t----t---c---t-------------------ttctt---ctaggtTCATT-TCCAGG-caa------tct-ct--ttcatttct-tgt---gTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTA----GC-AG---AAAG--------TA--ATTAGCACATAGAGCCTGGAA-tctca-acttt-taaatttt----attaatgagC-----C-----GATTTGA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   242903 145 - 183742232 -----------------t--t-t----------------c----t---t---t----------------------tt---caaggtttgTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAa-ac-ca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9365 145 +     21308 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  291938 145 -  20919399 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22013 145 -     27687 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15159 145 +     16796 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 21970 145 -     23640 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14824 148 +     78924 -----------------T--T------------------T----T---T---CT--T---C--------------TT---TTAGGTTCATTTTCTAGA-GAG------TCT-CT-TTTCATTGC--TGT---GTGC--TC--AT---CTGTGCACATT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATACAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAACGAGC-----T-----A-----A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 I 5
s Perodicticus_ibeanus.k141_1921260                          26090 143 +     31479 ---------------------------------------C----T---T---C----------------------TT---TGAGATGCCTT-TCCAAA-ACA------TCT-CT-TTTCATTGCT-TAT---GTGC--TT--AC---CAGTGCTGCCT-TGAAGTACCT-CTATGGTG----GC-AG---AGTG--------TA--ATTAGCACATGACTCCTAGAA-ACTCA-ACTTT-TAAATCAT----ATTAATAAGC-----T-----G-----A
i Perodicticus_ibeanus.k141_1921260                      I 5 C 0
s Perodicticus_potto.k141_1854441                            18460 143 -     24908 ---------------------------------------C----T---T---C----------------------TT---TGAGATGCCTT-TCCAAA-ACA------TCT-CT-TTTCATTGCT-TAT---GTGC--TT--AC---CAGTGCTGCCT-TGAAGTACCT-CTATGGTG----GC-AG---AGTG--------TA--ATTAGCACATGACTCCTGGAA-ACTCA-ACTTT-TAAATCAT----ATTAATAAGC-----T-----G-----A
i Perodicticus_potto.k141_1854441                        I 5 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1533 154 +      9367 T-------------T--A--T---------CTTAATTTTC----C---C---TT---G--C--------------TT---TGAGGTTTATT-TCTGGG-GAG------TTT-GT-TTTCATTTCT-TCT---CTGC--TC--AT----TGTGCTGATG-TAAAATACTT-CATT--TG----GA-AG---ACAG--------TA--ATTAGTATAGAGAGCCTGGAA-A--CA-ACTTT-TAAATTCT----ATTAATGAGC-----T-----G-----A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246618 151 +  18517816 t-------------t--t--tc-----------------c----t---t---t-------------------ctctt---tcaggtTCATT-TCTCAA-CAG------TCT-CC-TTTCATTGTT-TAT---GTGC--TT--AC---CTGTGCTCATT-TAAATTGCCT-TAGTGGCA----GC-CG---AGAA--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-CCAATTTT----ATTAATGAGC-----T-----G-----A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31728 117 -     56120 ------------------------------------------------------------------------------------------------------------TTT-CT-TTTCATTGTT-TAA---GTGC--TC--TT---CTGTGCTGATT-TAGAATACCT-TAGTGGGG----G-CAG---AGAG--------TA--ATTAGCATACAGAACCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTCATGAGC-----C-----T-----A
i Petromus_typicus.PetTyp_scaffold_17301                 I 25 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12533 150 -     15039 T-------------T--T--T------------------T----T---C---CT--T---C--------------TT---CTAGGTTCATT-TCCAGA-CAG------TCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CTATGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2183 145 +     55023 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAATTGCCT-TCGTGGTG----GC-AG---AGAG--------AA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1733 145 -     89929 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAATTGCCT-TCGTGGTG----GC-AG---AGAG--------AA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2322 145 +     40849 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAATTGCCT-TCGTGGTG----GC-AG---AGAG--------AA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  253986 145 +  14605196 -----------------t--t-t----------------c----t---t---t----------------------tt---caaggtttgTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAATTGCCT-TCGTGGTG----GC-AG---AGAG--------AA--ATTAGCATACAGAGTCTGGAA-ac-ca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3518 148 +     22231 A-------------T--T--T-----------------TT----T---T---CT--T---CTTT-----------TT---CTTGGTTCATT-TCTAGA-CAGTC--AGTCT-CT-TTTCCTTGCT-TGC---GTGC--TC--AT---CTGTGTAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------CA--ATTAG---------CCTGGA--ACTCA-ACTTT-TATATTTT----ATTAATGAGC-----T-----G-----A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64607 147 +    207309 C-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGCTTATT-TCTGGA-CAG------TCG-GT-TTTCATTCCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------GA--ATGAGCACGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----GTTAATGAGC-----T-----G-----A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5702 145 -     25401 C-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGCTTATT-TCTGGA-CAG------TCG-GT-TTTCATTCCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------GA--ATGAGCACG--TAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----GTTAATGAGC-----T-----G-----A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31443 147 +     58159 C-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGCTTATT-TCTGGA-CAG------TCG-GT-TTTCATTCCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------GA--AGGAGCACGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----GTTAATGAGC-----T-----G-----A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31719 147 +     63561 C-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGCCTATT-TCTGGA-CAG------TGG-GT-TTTCATTCCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------GA--ATGAGCACGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----GTTAATGAGC-----T-----G-----A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31479 147 +     51148 C-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGCTTATT-TCTGGA-CAG------TCG-GT-TTTCATTCCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------GA--AGGAGCACGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----GTTAATGAGC-----T-----G-----A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556451 145 -   4542175 C-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGCTTATT-TCTGGA-CAG------TCG-GT-TTTCATTCCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------GA--ATGAGCACG--TAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----GTTAATGAGC-----T-----G-----A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31463 147 +     51125 C-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGCTTATT-TCTGGA-CAG------TCG-GT-TTTCATTCCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------GA--ATGAGCACGTAGAGTCTGGAA-AC-CA-ACTCC-TAAATTTT----GTTAATGAGC-----T-----G-----A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4623 150 -      8168 T-------------T--T--A------------------T----T---C---CT--T---C--------------TT---CTACGTTCATT-TCCAGA-CAG------TCT-CT-TTTCATTGCT-TGC---GTGT--TC--AT---CTATGCGGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        7877 142 +     39866 ---------------------------------------C----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATGAGCATGTAGAGTCTGGAA-AG-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Plecturocebus_bernhardi.k141_2549090                   I 3 C 0
s Plecturocebus_brunneus.k141_862875                          2961 142 -      9282 ---------------------------------------C----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATGAGCATGTAGAGTCTGGAA-AG-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Plecturocebus_brunneus.k141_862875                     I 3 C 0
s Plecturocebus_caligatus.k141_1382851                       42365 142 -     87950 ---------------------------------------C----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATGAGCATGTAGAGTCTGGAA-AG-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Plecturocebus_caligatus.k141_1382851                   I 3 C 0
s Plecturocebus_cinerascens.k141_1164729                     42759 142 -     88961 ---------------------------------------C----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATGAGCATGTAGAGTCTGGAA-AG-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Plecturocebus_cinerascens.k141_1164729                 I 3 C 0
s Plecturocebus_cupreus.k141_2351393                          7457 142 -     39403 ---------------------------------------C----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATGAGCATGTAGAGTCTGGAA-AG-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Plecturocebus_cupreus.k141_2351393                     I 3 C 0
s Plecturocebus_dubius.k141_1058799                          42408 142 +     87928 ---------------------------------------C----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATGAGCATGTAGAGTCTGGAA-AG-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Plecturocebus_dubius.k141_1058799                      I 3 C 0
s Plecturocebus_grovesi.k141_2013005                          7454 142 -     60166 ---------------------------------------C----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATGAGCATGTAGAGTCTGGAA-AG-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Plecturocebus_grovesi.k141_2013005                     I 3 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14391 142 -     67232 ---------------------------------------C----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATGAGCATGTAGAGTCTGGAA-AG-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Plecturocebus_hoffmannsi.k141_3303950                  I 3 C 0
s Plecturocebus_miltoni.k141_349282                          42307 142 -     90634 ---------------------------------------C----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATGAGCATGTAGAGTCTGGAA-AG-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Plecturocebus_miltoni.k141_349282                      I 3 C 0
s Plecturocebus_moloch.k141_1031110                          43774 142 +     89403 ---------------------------------------C----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAT---GCAC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATGAGCATGTAGAGTCTGGAA-AG-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Plecturocebus_moloch.k141_1031110                      I 3 C 0
s Pongo_abelii.CM009266.2                                   177691 148 - 189387572 t-------------t--t--t-ttt--------------c----t---t---t----------------------tt---caaggtttATT-TGTGGA-CAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGgaa-a--ca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Pongo_abelii.CM009266.2                                I 3 C 0
s Pongo_pygmaeus.ctg66                                      192508 148 -   9816681 T-------------T--T--T---------------TTTC----T---T---T----------------------TT---CAAGGTTTATT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGGAA-A--CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Pongo_pygmaeus.ctg66                                   I 3 C 0
s Presbytis_comata.k141_1230337                              27308 145 +     69807 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATGGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATCAGCATACAGAGTCTGGAA-AC-CA-ACTTT-CAAGTTTT----ATGAATGAGC-----T-----G-----A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44494 145 -     80239 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATCAGCATACAGAGTCTGGAA-AC-CA-ACTTT-CAAGTTTT----ATTAATGAGC-----T-----G-----A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                    0  68 +      7663 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGGGGG-GG---GGGG--------GT--GTTAATGTACAGGGCGGGAAA-TGCCA-ACTTTTTTAATGTT----ATTAATGAGC-----T-----G-----A
i Procavia_capensis.ProCapCap_scaffold_165387            N 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982360 119 +   4620579 t-------------t--t--t-t----------------c----t---t---c----------------------tt---cgaTGTTCCTT-TCCGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CCGTGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTGTggaa-ac--------------------------------------------------
i Prolemur_simus.MPIZ01000396.1                          I 1 I 22
s Propithecus_coquerelli.NW_012148875.1                    1565861 148 -   2598838 t-------------t--t--t-t----------------c----t---t---c----------------------tt---cgaGGTTCCTT-TCTGGA-ATG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCCCGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-Actca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Propithecus_coquerelli.NW_012148875.1                  I 6 C 0
s Propithecus_coronatus.k141_209299                           3499 148 -      7103 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ATG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCCCGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----C-----G-----A
i Propithecus_coronatus.k141_209299                      I 6 C 0
s Propithecus_diadema.k141_153680                             4096 148 -     11706 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ATG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCCCGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----C-----G-----A
i Propithecus_diadema.k141_153680                        I 6 C 0
s Propithecus_edwardsi.k141_635656                            7834 148 -     30655 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ATG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCCCGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----C-----G-----A
i Propithecus_edwardsi.k141_635656                       I 6 C 0
s Propithecus_perrieri.k141_1496898                          34147 148 +     46564 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ATG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCCCGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----C-----G-----A
i Propithecus_perrieri.k141_1496898                      I 6 C 0
s Propithecus_tattersalli.k141_1127767                       94426 148 -     98465 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ATG------CCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCCCGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----C-----G-----A
i Propithecus_tattersalli.k141_1127767                   I 6 C 0
s Propithecus_verreauxi.k141_1047036                          8065 148 +     35169 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ATG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCCCGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Propithecus_verreauxi.k141_1047036                     I 6 C 0
s Psammomys_obesus.NESX01036366.1                            37226 150 +     52041 t-------------c--c--t-t----------------c----t---t---t-------------------ctctt---tcaggttCATT-TCTCTA-CAG------TCT-CC-TTTCATTGTT-TAT---ATGC--TT--AC---CTGTGCTGATT-TAAATTGCCT-TAGTGGCA----TG-A----AGAA--------TA--ATTAGCATATAGAGCCTGGAA-ACTca-acttt-tcaatttt----attaatgagC-----T-----G-----A
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            51922 133 -     66298 --------------------------------------------------------------------------------ccacattCATT-TCTAGA-CAG------TCG-CT-CTTCATTGCT-TGT---GTGC--TC--AT---CTGTGTAGGTT-TAAAATGCCT-TAGTGGTA----GC-AG---AGGA--------TA--ATTAG---------CCCGGAA-ACtca-atctt-taaatatt----attaatgagcTGAGCT-----G-----A
i Pteronotus_parnellii.KE847780.1                        I 13 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4415 149 -     18639 T-------------T--T--T------------------T----T---C---CT--T---C--------------TT---CTAGGTTCATTTTCTAG---AG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TGATGGTG----GC-AG---AGAG--------TA--ATTAGTATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGGGC-----T-----A-----A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 5
s Pteropus_alecto.KB030862.1                               5840606 139 -  28871421 ------------------------------------------------t---t-------------------tcctt---ctcagttcATT-TCTAGA-CAG------TGT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CAGTGCAGATT-TAAAATGCC--TAAGTATG----AT-AG---AGGG--------TA--TTTAG---------CTCAGAA-actca-acttt-taaatttt----attaatgaac-----tGAATTG-----A
i Pteropus_alecto.KB030862.1                             I 5 C 0
s Pteropus_vampyrus.KN525825.1                             3537125 139 -   4952924 ------------------------------------------------t---t-------------------ccctt---ctcggTTCATT-TCTAGA-CAG------TGT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CAGTGCAGATT-TAAAATGCC--TAAGTATG----AT-AG---AGGG--------TA--TTTAG---------CTCAGAA-Actca-acttt-taaatttt----attaatgaac-----tGAGTTG-----A
i Pteropus_vampyrus.KN525825.1                           I 5 C 0
s Puma_concolor.QAVW01001104.1                            18098873 151 +  38429054 t-------------a--t--t------------------t----t---t---t-------------------ttctt---ctaggttcATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TT--AT---CTGTGCATATT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATACAGCCTGGAA-Actca-acttt-taaatttt----attaatgagC-----T-----A-----A
i Puma_concolor.QAVW01001104.1                           C 0 I 5
s Pygathrix_cinerea.k141_1153803                             26682 145 +     91421 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153174 145 -   7812017 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7549 145 +     72585 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---GGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 52942 159 +     55069 T------------TT--T--T---------------TCTT----T---C---TT--T---C--------------TT---CTAGGTTCATT-TCCAGA-CAA------TCT-CT--TTCATTTTT-TGT---GTGTTTTC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTG----GC-AG---AAAG--------TA--ATTAGCATATAGAGCCTGGAA-TCTCG-ACTTT-TAAATTTT----ATTAATGAGC-----C-----GATTTGA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022514 146 -  90668790 ---------------------------------------c----t---t---c-------------------ccctt---tcaggTTCATT-TCTCTA-CAG------TCT-CC-TTTCGTTGTT-TAT---ATGC--TT--AC---CTGTGCTGATT-TAAATTGCCT-TAGTGGCT----GC-AG---AGTA--------TA--ATTAGCATATAGAACCGGAAA-ACtca-acttt-tcaatttt----attaatgaGC-----T-----G-----G
i Rattus_norvegicus.chr16                                I 4 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914492 148 +   3329780 att----------at--t--a------------------t----t---a---t----------------ttttcctt---ctaggtTCAGT-TCTAGA-CAG------tct-ct-tttcattgct-tttattatgC--TC--CT---CAGTGCGGATT-TAAAATGCC-TTAGTGGTG----GC-AG---AGAG--------TA--ATTAG---------CCTAGaa-attca-acttt-taaatttc----attaatgtGC-----T------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 2
s Rhinopithecus_bieti.k119_778604                             1255 145 +      7119 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104121863 145 + 195417433 -----------------t--t-t----------------c----t---t---t----------------------tt---caaggtttgTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAC---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-ac-ca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236105 145 -   7961872 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AA---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74536 142 -    116970 ------------------------------------------------T---TT--T---CTT--------C---TT---CTCGGTTCATT-TCTAGA-CAG------TGT-CT-TTTCATTGCT-TAT---ATGC--TC--AT---CAGTGCAGATT-TAAAATGCC--TAAGTATG----AT-AG---AGAG--------TA--TTTAG---------CTTGGAA-CCTCA-ACTTT-TAAATTTT----ATTAATGAAC-----TGAGTTG-----A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 5 C 0
s Saguinus_bicolor.k141_1429097                               3761 147 +     27962 T-------------C--T--T-----------------TC----T---T---T----------------------TT---CCAAGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAC---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCGT-TCGTGGTG----GC-CG---AGAG--------TA--ATTAGCATGCAGAGTCTGGAA-AC-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----A-----A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3656 147 +      6077 T-------------C--T--T-----------------TC----T---T---T----------------------TT---CCAAGTTTATT-TCTGGA-CAG------TTG-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCAT-TCGTGGTG----GC-CG---AGAG--------TA--ATTAGCATGCAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3746 147 +      5971 T-------------C--T--T-----------------TC----T---T---T----------------------TT---CCAAGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAC---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCAT-TCGTGGTG----GC-CT---AGAG--------TA--ATTAGCATGCAGAGTCTGGAA-AC-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3667 147 +      5932 T-------------C--T--T-----------------TC----T---T---T----------------------TT---CCAAGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAC---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCAT-TCGTGGTG----GC-CT---AGAG--------TA--ATTAGCATGCAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2009 147 -      4390 T-------------C--T--T-----------------TC----T---T---T----------------------TT---CCAAGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAC---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCAT-TCGTGGTG----GC-CT---AGAG--------TA--ATTAGCATGCAGAGTCTGGAA-AC-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391446 147 - 209938924 T-------------C--T--T-----------------TC----T---T---T----------------------TT---CCAAGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAC---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCGT-TCGTGGTG----GC-CG---AGAG--------TA--ATTAGCATGCAGAGTCTGGAA-AC-CA-ACTTC-TAAATTGT----ATTAATGAGC-----T-----G-----A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3616 147 +      5979 T-------------C--T--T-----------------TC----T---T---T----------------------TT---CCAAGTTTATT-TCTGGA-CAG------TCG-GT-TTTCATTGCT-TAC---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCAT-TCGTGGTG----GC-CT---AGAG--------TA--ATTAGCATGCAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                185 147 -     22275 T-------------C--T--T-----------------TC----T---T---T----------------------TT---CCAAGTTTATT-TCTGGA-CAG------TTG-GT-TTTCATTGCT-TAC---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCAT-TCGTGGTG----GC-CG---AGAG--------TA--ATTAGCATGCAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7613 161 +     16473 T-----TTTTTTTTT--T--T------------------T----T---C---TT--T---C--------------TT---CTAGGTTCATT-TCCAGA-CAA------CCT-CT--TTCATTTCT-GGT---GTGT--TC--AT---CTTTGCAG-TA-TAAAATGCCT-TAGTGGTA----GT-GG---AAAG--------TA--ATTAGCACATAGAGGCTGGAA-TCTCA-ACTTT-TAAATTTT----ATTAATGAGC-----C-----GATTTGA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108783 147 + 121099817 c-------------t--t--tc-----------------c----t---t---t----------------------tt---cgaGGTTTATT-TCTGGA-CGG------TTG-GT-TTTCATTGCT-TAT---CCGC--TC--AT---CTATGCTGCTT-TAAAACGCCT-TCATGGTG----GC-AG---AGAG--------TA--ATTAGCAAGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATGTT----ATTAATGAGC-----T-----G-----A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30350 147 -     47369 C-------------T--T--T-----------------CC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CGG------TTG-GT-TTTCATTGCT-TAT---CCGC--TC--AT---CTATGCTGCTT-TAAAACGCCT-TCATGGTG----GC-AG---AGAG--------TA--ATTAGCAAGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATGTT----ATTAATGAGC-----T-----G-----A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30736 147 -     79414 C-------------T--T--T-----------------CC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CGG------TTG-GT-TTTCATTGCT-TAT---CCGC--TC--AT---CTGTGCTGCTT-TAAAACGCCT-TCATGGTG----GC-AG---AGAG--------TA--ATTAGCAAGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATGTT----ATTAATGAGC-----T-----G-----A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27427 147 -     34454 C-------------T--T--T-----------------CC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CGG------TTG-GT-TTTCATTGCT-TAT---CCGC--TC--AT---CTGTGCTGCTT-TAAAACGCCT-TCATGGTG----GC-AG---AGAG--------TA--ATTAGCAAGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATGTT----ATTAATGAGC-----T-----G-----A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14830 145 -     22428 C-------------T--T--T-----------------CC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CGG------TTG-GT-TTTCATTGCT-TAT---CCGC--TC--AT---CTATGCTGCTT-TAAAACGCCT-TCATGGTG----GC-AG---AGAG--------TA--ATTAGCAAGTAG--TCTGGAA-AC-CA-ACTTC-TAAATGTT----ATTAATGAGC-----T-----G-----A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  29982 147 -     47109 C-------------T--T--T-----------------CC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CGG------TTG-GT-TTTCATTGCT-TAT---CCGC--TC--AT---CTATGCTGCTT-TAAAACGCCT-TCATGGTG----GC-AG---AGAG--------TA--ATTAGCAAGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATGTT----ATTAATGAGC-----T-----G-----A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238038 145 +   5703754 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCGTTGCT-TAC---ACGC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AG----------TA--ATTAGCATGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7628 145 +     21866 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CGAGGTTTATT-TCTGGA-CAG------TCG-GT-TTTCGTTGCT-TAC---ACGC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AG----------TA--ATTAGCATGTAGAGTCTGGAA-AC-CA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115678 138 +    313613 ----------------------------------------------------TT--T---C--------------TT---C---ATTCATT-TCTAGA-CAA------TCT-CT-TTTCATTGTT-TAT---GTGA--TC--AT---C--TGCAGATT-TAAAATGCCT-CAGAGGTG----GC-AG---AGAA--------TA--ATTAGCACATAGAGCCTAGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 7 C 0
s Semnopithecus_entellus.k141_158471                         25001 145 +     27374 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28515 145 +     58920 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15011 145 -     45317 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22670 145 -     42441 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25348 145 -     29113 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGTTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28422 145 -     48123 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    48998 147 +     77746 --------------------T-----------------CC----T---T---T--CT---C--------------TT---TCAGGTTCACT-TCTCAA-CAG------TCT-CC-TTTCCTTGTT-TAT---GTGC--TT--AC---CTGTGCTAATT-TAAATTGCCT-TAGTGGCA----GC-AG---AGGA--------TA--ATTAGCAT-TGGAACCTGGAA-ACTCA-ACTTT-GCAATTTT----ATTAATGAGC-----T-----G-----G
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1858022 152 -   1910179 G-------------CTAT--T------------------T----A---T---TT--T---C--------------TT---TGAGGTTCCTT-TCTAGA-TTG------TCT-CT-TTTCATTGCT-TAT---ACGC--TC--AT---CTTTGCAGATT-TAAAACACCT-TAGTGGTA----GC-AG---AGAG--------TA--ATTATTATATAGAGTGCAGAA-ACTCA-ACTTT-TAAATTTT----ATTAAtgaac-----t-----g-----a
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 5921
s Sorex_araneus.JH798187.1                                 4671101 148 +  18376816 t-------------t--t--t------------------t----c---c---c-------------------ttttt---ctaggTTAATT-TCCAGA-AAA------TCT-CT-TTTTATTGCT--GT---GTAT--TT--AT---TGGGGTAGATT-TAAAATGCCT-TAGGGGTG----GC-A----AGAG--------TA--ATTAGAATATAGAGCTCAAAA-actca-aattt-tacatttt----acttatgAGC-----T-----G-----A
i Sorex_araneus.JH798187.1                               I 10 C 0
s Spermophilus_dauricus.KZ294078.1                         1868125 158 +   3870691 ttttt-----aag-t--t--c-t----------------t----t---c---t-------------------ctttt---tcaggtTCATT-TCTGGA-CAG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGATT-TAAAATGCCT-TAGTGGTA----GC-AG---AGGG--------TA--ATTAGCATCGAGAGCCTGGAA-actca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6483 151 -     97271 T-------------T--T--T------------------T----T---T---CT--T---C--------------TT---CTAGGTTCATTTTCGAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 5
s Suricata_suricatta.SurSur_flattened_line_6629             124641 153 +    196729 T-------------C--T--T------------------T----T--CC---CT-C----CTT--------C---TT---CTAGGTTCATTTCCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGGACATT-TAAAATGCCT-TAGTGGTG----GC-AG-----AG--------TA--ATTAGTATATACAGCCTGGAC-ATTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----A-----A
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 I 5
s Sus_scrofa.CM000828.4                                    6643531 153 +  69701581 t-------------t--t--t------------------taaaat---t---c-------------------tgctt---cgAGGTTCATT-TCCAGA-CA-------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTATGCAGATT-CAAAATGCCT-TAGTGGTG----GC-AC---TGAG--------TA--ATTAGCATACAGAGCCTGGGA-actca-acttt-taaatttt----attaataagc-----T-----G-----A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       390939 147 +   1523678 T-------------T--T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTATT-TGTGGA-CAG------TCT-GT-TTTCGTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14086 144 +     22964 A-------------T--T--T------------------T----T---T---CT--T---CTT--------C---TT---CTATGTTCATT-TCTAGA-CAG------TGT-CT-TTTCGTTGCT-TGT---GTGC--TC--AT---CTGTGTGGGTT-TAAAATGCTT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAG---------CCTGGAA-ACCCA-ACTTT-TAAATTGT----ATTAATGAGC-----T-----G-----C
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2468 153 +      5583 A-------------T--T--T---------------TTTT----T--CT---CT--T---C--------------TT---CTGCGTTCATT-TCTAGA-CAG------TCT-CC-TTTCAGTG-T-TGT---GTGC--TT--GT---CTGTGCAGATT-TAAAATGCCT-TAATGATT----GC-AG---GAAG--------TA--ATTAGCATAGAGAGCCTGGAA-ACTCA-TCTTT-TAAATTGT----ATTAATGAGC-----A-----G-----C
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191377 151 +    199430 T-------------T--T-TT------------------C----T---T---CT--T---C--------------AT---CTAAGTTCATT-TCTAGG-CAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--GT---CTGTGCAAACT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCCGGAA-ACTCA-ATTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Tapirus_indicus.TapInd_scaffold_7432                   I 1 I 5
s Tapirus_terrestris.TapTer_scaffold_755                    105347 151 -    539355 T-------------T--T-TT------------------C----T---T---CT--T---C--------------AT---CTAAGTTCATT-TCTAGG-CAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--GT---CTGTGCAAACT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ATTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 I 5
s Tarsius_lariang.k141_1733899                                 398 148 +      9917 T-------------T--C--T-----------------TC----T---T---C----------------------TT---TGAGGTTTATT-TCTTGG-CGG------TCT-CT-TTTTATTGCT-TAT---TTGC--TT--CT---TTGTTCTGCTT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGGCTGGAA-ACTCA-GCTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7188 148 +     20590 T-------------T--C--T-----------------TC----T---T---C----------------------TT---TGAGGTTTATT-TCTTGG-CAG------TCT-CT-TTTTATTGCT-TAT---TTGC--TT--CT---TTGTTCTGCTT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGGCTGGAA-ACTCA-GCTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           352889 145 - 186847797 -----------------t--t-t----------------c----t---t---t----------------------tt---caaggtttGTT-TGTGGA-CAG------TCT-GT-TTTCCTTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAa-ac-ca-acttt-taaatttt----attaatgagC-----T-----G-----A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              23908  93 -     33621 ----------------------------------------------------------------------------------------------------------------------------------------------NN---NNNNNNNNNNN-NNNNNNNNNN-NNNNNNNN----N-NNN---NNNN--------TA--ATTAACATACAGAACTTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----C-----T-----A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 200 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19566 153 -     31044 A-------------C--T--T---------------ACCT----T--TT---CT--T---C--------------TT---CAAGGCTCATT-TCTAGA-CAG------TCT-CT-GTTCATTG-T-TGT---GTGC--TT--GT---CTGTGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---GAAA--------TA--ATTAGCAGACAGAGCCTGAAA-GCTCA-ACTTT-TAGATTTT----ATTAATGAGC-----A-----G-----A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    479902 149 -    610378 G-------------T--T--T------------------T----C---CCTTCT--T---C--------------CT---CCACATTCGTT-CCTAGA-CAG------TCT-CT-CTTCATCGCT-TGT---GTGC--TC--AG---CTGTGTAGGTT-TAAAATGCCT-GAGCAGTG----GC-AG---AAAA--------TA--ATTAG---------CCCGGAA-ACTCA-ACTTT-TAAACATT----ATTAATGAGCTGAGTT-----G-----A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20547 145 +     26378 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33225 145 -     78344 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       19872 145 +     25722 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28178 145 -     62838 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--CC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Trachypithecus_francoisi.k141_1453105                  I 1 C 0
s Trachypithecus_geei.k141_1001272                           28223 145 +     46913 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9030 145 -     28527 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TTGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30114 145 -     64340 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28151 145 -     63452 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9597 145 +     22490 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTATGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Trachypithecus_leucocephalus.k141_96450                I 1 C 0
s Trachypithecus_melamera.k141_591572                         3022 145 -      6147 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCGTACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                         9927 145 -     13050 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255167 145 -   6242583 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1191 145 +     19340 -----------------T--T-----------------TC----T---T---T----------------------TT---CAAGGTTTGTT-TGTGGA-CAG------TCT-GT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGCTT-TAAAATGCCT-TCGTGGTG----GC-AG---AGAG--------TA--ATTAGCATACAGAGTCTGGAA-AC-CA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173226 160 -    200418 T-----------TTT--T--T------------------T----T---T---TT--T-TT-T---------CC--TC---CTAGGTTCATT-TCCAGA-CGG------TCC-CT--TTCATTGCT-TGT---GTGT--TC--AT---CTATGCAGATA-TAAAATGCCT-TAGTAGTG----GC-AG---AAAG--------TA--ATTAGTGTATACAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----GAGTTGA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480195 164 -  10818551 t-------------g--t--a-t----------------t----t--at---t-----tatttattgacctC---TT---CTGGGTTTATT-TCTAGG-CAG------TCT-CT-TTTTGTTGCT-TGTAGTGTGC--TC--AT---CTGTACGGATT-TAAAATGCCT-TAGTGGTG----GT-GG---G--G--------CA--ATTAGCATACAGAGCCTGGGA-GCtca-acttt-ttcatttt----attaatgaaC-----T-----G-----A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1833900 131 -   4065304 --------------------------------------------------------------------------------------ACATT-TCTGGA-CCG------TCT-CT-TTTCATTGTG-TAC---ATGC--TC--AC---TGGTGCTGATT-TAAAACGCCT-GGGTGGTG----GC-AA---CGAG--------TA--ATTAGCAAGTAGAGCTGGGCA-Actca-acttt-taaatttt----attaacaaGC-----T-----G-----A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       7920 131 -     70247 --------------------------------------------------------------------------------------ACATT-TCTGGA-CCG------TCT-CT-TTTCATTGTG-TAT---GTGC--TC--AC---TGGTGCTGATT-TAAAACGCCT-GGGTGGTG----GC-AA---CGAA--------TA--ATTAGCATGTAGAGCTGGGCA-ACTCA-ACTTT-TAAACGTT----ATTAACAAGC-----T-----G-----A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361434 150 -  33153633 t-------------t--t--t------------------t----t---c---GT--T---C--------------GT---CTAGGTTCATT-TCCAGA-CAG------GCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CTATGCAGAGT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----C-----A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3418 138 -     21056 ----------------------------------------------------T--C----C----------C---TC---T---GTTCACT-TCTATA-CAG------TCT-CT-TTTTATTGTT-TAT---GTGC--TC--AG---C--TACAGATT-TAGAATGCCT-CAGAGGTG----GC-AG---AGAA--------TA--ATTAGCACATAGAGTCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Uropsilus_gracilis.UroGra_scaffold_46687               I 6 C 0
s Ursus_maritimus.KK499267.1                                181588 151 +   5085361 t-------------t--t--t------------------c----t---t---c-------------------ttctt---ctaggtTAATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TGGTGGTG----GC-AG---GGAG--------TA--ATTAGTATATAGAACCTGGAA-actca-acttt-taaatttt----attaatgagC-----T-----A-----A
i Ursus_maritimus.KK499267.1                             C 0 I 5
s Varecia_rubra.k141_787544                                  25002 148 -     30710 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGT--TC--AT---CCGTGCTGCTT-TAAAATGCCT-TTGCGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Varecia_rubra.k141_787544                              I 1 C 0
s Varecia_variegata.k141_289850                              23909 148 -    147434 T-------------T--T--T-----------------TC----T---T---C----------------------TT---CGAGGTTCCTT-TCTGGA-ACG------TCT-CT-TTTCATTGCT-TAT---GTGT--TC--AT---CCGTGCTGCTT-TAAAATGCCT-TTGCGGTG----GC-AG---AGAG--------TA--ATTAGCATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Varecia_variegata.k141_289850                          I 1 C 0
s Vicugna_pacos.KN270157.1                                   76067 149 +   5488506 t-------------t--t--c------------------t----c---t---c-------------------ttctt---ctaggTTCATT-TTCAGA-CAG------TCG-CTCTTTCATTGCT-TGT---CTGC--TT--At---ctgtacatatt-taaaatgcCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAGCCTATAGAGCTAGGAA-acta--a-ctt-taaatttt----attaatgagC-----T-----G-----A
i Vicugna_pacos.KN270157.1                               I 8 I 5
s Vulpes_lagopus.VulLag_flattened_line_12041                104722 151 -    112863 T-------------T--T--T------------------T----T---T---CT--T---C--------------TT---CTTGGTTCATTTTCTAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TAGTGGTG----GC-AG---AGAG--------TA--ATTAATACATAGAGCCTGGAA-ACTTA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----A-----A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 5
s Xerus_inauris.XerIna_scaffold_2302                        173912 158 -    224448 T------TTTTTAAT--T--C-----------------TT----T---C---T--CT-T----------------TT---TCAGGTTCATT-TCTGAA-CAG------TCT-CT-TTTCATTGCT-TAT---GTGC--TC--AT---CTGTGCTGATT-TAAAATGCCT-TAGTGGTA----GC-AC---AGGG--------TA--ATTAGCATAGAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28617 152 -     86975 t-------------t--t-tt------------------t----t---t---c-------------------ttttt---ctaggttcattttctAGA-GAG------TCT-CT-TTTCATTGCT-TGT---GTGC--TC--AT---CTGTGCAGATT-TAAAATGCCT-TGGTGGTG----GC-AG---AGAG--------TA--ATTAGTATATAGAGCCTGGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----A-----A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 5
s Zapus_hudsonius.ZapHud_scaffold_501999                       397 145 -       833 ---------------------------------------C----T---C---C--C-------------A-C---TT---CCACATTCATT-TCTGGA-TAG------TCT-CT-TTTCATTGCT-TAT---TTGC--TC--AC---CTGTGCTGACT-TAAATCGCCT-TTGTGGTG----GC-AG---AGAA--------TA--ATTAGCATATGACA-CTAGAA-ACTCA-ACTTT-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Zapus_hudsonius.ZapHud_scaffold_501999                 I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             841 150 +      1812 T-------------T--T--T------------------T----T---C---CT--T---C--------------TT---CTAGTTTCATT-ACCAGA-CAG------TCT-CT-TTTCATTGCT-TGT---GTGT--TC--AT---CAATGCAGATT-TAAAATGCCT-TAGTGGGG----GC-AG---AGAG--------TA--ATTAGCATATACAGCCTGGAA-ACTCA-ACTTC-TAAATTTT----ATTAATGAGC-----T-----G-----A
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Neomonachus_schauinslandi.NINY01007730.1                11468589   0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5373 40 +     36723 GTTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACT-CCAGGAGCAT
s Acinonyx_jubatus.LLWD01001279.1                           812771 35 +   1699592 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Acinonyx_jubatus.LLWD01001279.1                        I 5 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25039 42 +     63021 ATTTAG-TC-----CC--CC--CCT-TTATC---------TTTTAACTGACC-CCAAGGGCAT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415230 35 +  29979442 -----G-TT-----CT------CCT-TTATC---------TTTTGACTGACC-CCAAGAGCAT
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 5 C 0
s Ailurus_fulgens.LNAC01001112.1                            215539 35 +    347723 -----G-TT-----CT------CCT-TTATC---------TCTTAACTGACC-CCAAGAGCAT
i Ailurus_fulgens.LNAC01001112.1                         I 5 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    17985 40 -     61208 GTTTTG-TT-----CT------CCT-TTATC---------TTTTAACTGATC-CCCAAAACAT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47689 40 +     53615 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43671 40 +     44087 GTTTAG-TG-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16279 40 -     21945 GTTTAG-TG-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         17962 40 +     32033 GTTTAG-TG-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72126 40 -     84148 GTTTAG-TT-----CC------CCT-GCATC---------TTTTAGTTGACT-CCAGGAGCAT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44365 40 -     78289 GTTTAG-TT-----CC------CCT-GCATC---------TTTTAGTTGACT-CCAGGAGCAT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43804 40 +     55831 GTTTAG-TT-----CC------CCT-GCATC---------TTTTAGTTGACT-CCAGGAGCAT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42254 40 -     64179 GTTTAG-TT-----CC------CCT-GCATC---------TTTTAGTTGACT-CCAGGAGCAT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23888 40 -     24835 GTTTAG-TT-----CC------CCT-GCATC---------TTTTAGTTGACT-CCAGGAGCAT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40879 40 +     45454 GTTTAG-TT-----CC------CCT-GCATC---------TTTTAGTTGACT-CCAGGAGCAT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46528 40 +     70886 GTTTAG-TT-----CC------CCT-GCAAC---------TTTTAGTTGACT-CCAGGAGCAT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8701 40 +     30854 GTTTAG-TT-----CC------CCT-GCATC---------TTTTAGTTGACT-CCAGGAGCAT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32835 40 +     42133 GTTTAG-TT-----CC------CCT-GCATC---------TTTTAGTTGACT-CCAGGAGCAT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585222 32 +   2318259 ------------------------------CTCCTTTATCTTTTAACTGACC-CCAGGAGCAT
i Ammotragus_lervia.NIVO01071767.1                       I 3 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177008 36 -    412891 -----GTTT-----CC------CCT-TTCTT---------TTTTAACTGACC-CCAAGAGCAT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50326 35 -     68529 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAGGAGCAT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1081 40 +     17741 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1706 40 -     15923 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                671988 40 +   5030052 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               1982 40 -     16391 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1541 40 -     17186 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15903 40 -     32367 GTAGAG-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCTC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19439 39 -     45910 GTTTAG-TT-----CC------TCT-TCATT---------TTCTAACAGACT-A-AGGAGCAT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5287 35 -     15198 -----G-TT-----CC------CCT-TTCTT---------TTTTAACTGACC-CCAAGAGCAT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274580 40 +  21539123 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Ateles_geoffroyi_b.tarseq_1536                            I 18 C 0
s Ateles_belzebuth.k141_1572163                              10746 40 +     48076 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Ateles_belzebuth.k141_1572163                          I 18 C 0
s Ateles_chamek.k141_615173                                   5883 40 -     28759 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Ateles_chamek.k141_615173                              I 18 C 0
s Ateles_geoffroyi_a.k141_1283730                              33437 40 +     44353 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Ateles_geoffroyi_a.k141_1283730                          I 18 C 0
s Ateles_marginatus.k141_970259                              48806 40 -     71267 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Ateles_marginatus.k141_970259                          I 18 C 0
s Ateles_paniscus.k141_866194                                22866 40 -     33135 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGAAT
i Ateles_paniscus.k141_866194                            I 18 C 0
s Avahi_laniger.k141_2756659                                  6112 40 +     11645 GTTTAG-TT-----CC------TGT-TCATT---------TTTTAACTGACT-CCAGCAGCAT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6120 40 -     19611 GTTTAG-TT-----CC------TGT-TCATT---------TTTTAACTGACT-CCAGCAGCAT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7957108 35 -  23207421 -----G-TT-----CC------CCT-TTATA---------TTTTAACTGACC-CCAAGAGCAT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         4317 35 -      4711 -----G-TT-----CC------CCT-TTATA---------TTTTAACTGACC-CCAAGAGCAT
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86227 35 +    124022 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAGGAGCAT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21760 35 +    288883 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAGGAGCAT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356153 35 +  48749331 -----G-TT-----CC------CCT-NTATC---------TTTTAACTGACC-CCAGGAGCAT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754716 35 +   1948126 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAGGAGCAT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544859 35 -  45695690 -----G-TT-----CC------CCT-GTATC---------TTTTAACTGACC-CCAGGAGCAT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529879 35 -   4408762 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAGGAGCAT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7756 40 +     28062 GTGTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43050 40 -     91139 GTGTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20576 40 +     95584 GTGTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20489 40 +    119600 GTGTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10061 40 +     18648 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACC-CCAGGAGCAT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9596 40 -     13885 GTTTAG-TT-----CC------CCT-GTATC---------TTTCAGCTGACT-CCAGGAGCAT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1666 40 -      8861 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454059 40 + 189096842 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1582 40 +      8664 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630887 35 +  17673402 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Camelus_bactrianus.KN276810.1                          I 5 C 0
s Camelus_dromedarius.KN272107.1                           4665173 35 +   7040546 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Camelus_dromedarius.KN272107.1                         I 5 C 0
s Camelus_ferus.KB017975.1                                 1208833 35 +   1652518 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Camelus_ferus.KB017975.1                               I 5 C 0
s CanFam4.chr16                                           42505247 35 +  60362399 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i CanFam4.chr16                                          I 5 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8883 35 -     23171 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 5 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222226 35 +   9314153 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Canis_lupus_dingo.QKWQ01000480.1                       I 5 C 0
s Canis_lupus_familiaris.chr16                            41615361 35 +  59632846 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Canis_lupus_familiaris.chr16                           I 5 C 0
s Canis_lupus_orion.HG994398.1                            45106942 35 -  63665305 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Canis_lupus_orion.HG994398.1                           I 5 C 0
s Capra_aegagrus.CM003241.1                               27408951 32 -  46296322 ------------------------------CTCCTTTATCTTTTAACTGACC-CCAGGAGCAT
i Capra_aegagrus.CM003241.1                              I 3 C 0
s Capra_hircus.CM004588.1                                 26591225 32 +  44709034 ------------------------------CTCCTTTATCTTTTAACTGACC-CCAGGAGCAT
i Capra_hircus.CM004588.1                                I 3 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1431 40 -      1880 GTTTAG-CT-----CC------CCG-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270319 40 +    496798 GTTTAG-TT-----CA------CCT-TTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                125 35 +      9923 -----G-TT-----CC------CCT-TTCTT---------TTTTAACTGACC-CCAAGAGCAT
i Carollia_perspicillata.CarPer_scaffold_107871          N 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27563 40 -     39886 CTTTAG-GT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGAAT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79419 39 -    217609 -----G-TTGAATTTC------CCT-TTATC---------TTTTAACTGACC--CAAGGGCAT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996277 40 +  23392119 GTTTAA-CT-----CC------CGT-TTATC---------TTTTAACTGACC-CCAAGAGCTT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999719 40 +  23407841 GTTTAA-CT-----CC------CGT-TTATC---------TTTTAACTGACC-CCAAGAGCTT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62800 40 -     66877 GTTTAA-CT-----CC------CGT-TTATC---------TTTTAACTGACC-CCAAGAGCTT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           4979 40 -     12580 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43037 40 +     53515 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  370967 40 -  26074798 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7856 40 -     34880 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66951 40 -     89041 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2283 40 -      5494 GTTTAG-TT-----CA------CCT-TCATC---------TTTTAGCTGACT-CCAGGAGCAT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492058 35 -  27778364 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Ceratotherium_simum.JH767749.1                         I 5 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18891 35 +     27315 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 5 C 0
s Cercocebus_atys.KQ010504.1                                140866 40 -   4669795 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGAAGCAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44608 40 +     47900 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44432 40 -     44860 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGAAGCAT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44421 40 -    148725 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26608 40 -     40656 GTTTAG-TT-----CC------CGT-TTGTC---------TCTTAACTGACG-CCAGGAGCAT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6574 40 +     20796 GTTTAG-TT-----CC------CGT-TTGTC---------TCTTAACTGACG-CCAAGAGCAT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11691 40 -     17524 GTTTAG-TT-----CC------CGT-TTGTC---------TCTTAACTGACG-CCAGGAGCAT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27413 40 -     34525 GTTTAG-TT-----CC------CGT-TTGTC---------TCTTAACTGACG-CCAGGAGCAT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11195 40 -     25376 GTTTAG-TT-----CC------CGT-TTGTC---------TCTTAACTGGCG-CCAGGAGCAT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363790 40 -  39242232 GTTTAG-TT-----CC------CGT-TTGTC---------TCTTAACTGACG-CCAGGAGCAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269507 40 +  21565898 GTTTAG-TT-----CC------CGT-TTGTC---------TCTTAACTGACG-CCAGGAGCAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        31880 40 -     45857 GTTTAG-TT-----CC------CGT-TTGTC---------TCTTAACTGACG-CCAGGAGCAT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26779 40 -     32606 GTTTAG-TT-----CC------CGT-TTGTC---------TCTTAACTGACG-CCAGGAGCAT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         2938 40 +      8499 GTTTAG-TT-----CC------CGT-TTGTC---------TCTTAACTGGCG-CCAGGAGCAT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25335 40 +     70610 GTTTAG-TT-----CC------CGT-TTGTC---------TCTTAACTGGCG-CCAGGAGCAT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22305 40 +     36323 GTTTAG-TT-----CC------CGT-TTGTC---------TCTTAACTGACG-CCAGGAGCAT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12630 40 -     19938 GTTTAG-TT-----CC------CTT-TTATA---------TTTTAACTGACC-CCGAGAGCAT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30488 40 -     33796 GTTTAG-TT-----CC------CCT-TCGTT---------TTTTAACTGACT-CCAGGAGCAT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5005 40 -     15404 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8854 40 -     32913 CTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19267 40 -     40346 CTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19522 40 +    216457 CTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19315 40 +     39636 CTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238655 40 -   2543920 GTTTAG-CT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3910 40 +      5346 GTTTAG-TT-----TC------CCG-GTATC---------TTTTATCTGACT-CCAGGAGCAT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42387 40 -    112038 GTGTAG-TT-----CC------CCT-GTGTC---------TTTTAGCTGACT-CCAGGAGCAT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7958 40 +     34062 GTGTAG-TT-----CC------CCT-GTGTC---------TTTTAGCTGACT-CCAGGAGCAT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343196 40 +  18827391 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9743 40 -     44032 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304520 40 - 135778131 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14670 40 +     15858 GTTTAG-TT-----CC------TCT-TTATA---------TTTTAACTGACC-CCAAGAGCAT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606245 40 -    839153 GTTTAG-TT-----CC------TCT-TTATA---------TTTTAACTGACC-CCAAGAGCAT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                673 30 +      2406 ----------------------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          I 8 C 0
s Colobus_angolensis.KN981557.1                             408945 40 -   2368649 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      378821 40 - 200372422 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2370 40 -     84244 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807126 35 +  53390261 -----g-tt-----tc------tct-ttatc---------ttttaacTGACC-CCAAGAGCAT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2642 35 -      8242 -----G-TT-----GC------CCT-TTATC---------TTTTAACTGACT-ACATGAGCAT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44182 40 -     83289 ATTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114746 40 - 224834208 ATTTAG-TT-----TC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9331 40 +     12657 -----G-TT-----CAGTCCCT-CT-TTATC---------TTTTAACTGACC-CTAAGGGCAT
i Crocidura_indochinensis.CroInd_scaffold_77846          I 54 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4216 35 +     87169 -----G-TT-----CC------CCT-TTATC---------TTTTAAGTGACC-CCAAGAGCAT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 5 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644877 40 -   1526836 GATTAG-CT-----TC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18222 40 +     50838 GTTTAG-CT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4200 40 +     36344 GTTTAA-CT-----CT------CAT-TTATC---------TTTTAACTGACC-CCAGGAGCAT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            27976 40 +     75252 GTTTAA-CT-----CC------CAT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2109980 40 -   2246927 GTTCAG-CT-----CC------CCT-TTATA---------TTTTAACTGACC-CCAAGAGTTT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292426 40 +  12879189 GTTTAG-TT-----CC------CCT-TCATT---------TTTTCACTGACT-CCAGGAGCAT
i Daubentonia_madagascariensis.ctg71                     I 62 C 0
s Delphinapterus_leucas.KZ290073.1                        18625644 36 -  35494412 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACCCCCAAGAACAT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330325 35 -   2620052 -----g-tt-----cc------cct-ttctt---------ttttaactgacC-CTGAGAGCAC
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664340 35 -   1390856 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 5 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139135 35 -    198055 -----G-TT-----TC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Diceros_bicornis.DicBicMic_scaffold_5955               I 5 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98741 40 -    115145 GTTTAG-CT-----CC------CCT-TTATC---------TTCTAACTGACC-CCAAGAGCAT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950360 39 -  37912305 CT-TAG-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGTTC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5298 39 -     10735 CT-TAG-TT-----CC------TCT-TTATC---------TTTTAACTGACC-CCAAGAGTTC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10236 40 +     14636 GTTTAA-CT-----CC------CGT-TTATC---------TTCTAACTGACC-CCAAGAGCTT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62854939 36 - 111700974 GTCTag-tt-----tc------cct-ttatt---------ttttaa----cC-CCAAGAGCAT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6097 35 +     19438 -----G-TT-----CC------CCT-TTATC---------TTGTAACTGACC-CCAAGAGCAT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239588 35 -    607251 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAGGAGCAT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108602 40 -  10337057 GTTTTG-TT-----CC------CCT-TTATC---------TTATAACTGACC-CCAAGAGCAT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30894 40 +    110024 ATTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12865 40 +     18970 ATTTAG-TT-----TC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24915968 35 +  41312741 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Enhydra_lutris.KZ291758.1                              I 5 C 0
s Eptesicus_fuscus.JH977646.1                             12578759 35 +  14770903 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041219 35 -   4378816 -----G-TT-----TG------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Equus_asinus.JREZ01000139.1                            I 5 C 0
s Equus_caballus.CM000403.2                               21375157 35 +  39960074 -----G-TT-----TG------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Equus_caballus.CM000403.2                              I 5 C 0
s Equus_przewalskii.ATBW01110277.1                             538 35 -      1194 -----G-TT-----TG------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Equus_przewalskii.ATBW01110277.1                       I 5 C 0
s Erinaceus_europaeus.JH835339.1                           3665917 40 +   7059049 -----A-TT-----GAGTTCC-TCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262723 40 +  21539334 GTTTAG-TG-----CC------CGT-TTAGC---------TCTTAACTGACT-CCAGGAGCAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           64984 35 -    133382 -----G-TT-----CC------CCT-TTATA---------TTTTAACTGACC-CCAGGAGCAT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             5203 35 +      7672 -----G-TT-----CC------CCT-TTATA---------TTTTAACTGACC-CCAAGAGCAT
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14635 40 -     24895 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42344 40 -     70999 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86306 40 +    112731 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42875 40 +     68309 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53201 40 -     65740 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23830 40 -     75513 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48028 40 -     97555 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4752 40 +     30972 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42472 40 -     52037 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58874 40 -    111500 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246680 35 - 206538554 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCCT
i Felis_catus.CM001381.2                                 I 5 C 0
s Felis_catus_fca126.CM031415.1                          185116466 35 - 205367284 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCCT
i Felis_catus_fca126.CM031415.1                          I 5 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27563 35 -     30238 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Felis_nigripes.FelNig_flattened_line_31944             I 5 C 0
s Fukomys_damarensis.KN121974.1                            2916277 40 -   3816255 GTTTGG-CT-----CC------CCT-TTATC---------TTTTAACTGACC-ACAAGAGcat
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     124873 40 -    137831 GTTTAG-TT-----CC------TCT-TCATT---------TTCTAACAGACT-CTAGGAGCAT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8418 40 +     22493 GTTTAG-TT-----CC------TCT-TCATT---------TTCTAACAGACT-CTAGGAGCAT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20490 40 -     32986 GTTTAG-TT-----CC------TCT-TCATT---------TTCTAACAGACT-CTAGGAGCTT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1030 40 -     28519 GTTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACT-CCGAGAGCAG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91291 35 -     95226 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGATC-CCAGGAGCAC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34356 39 -     36801 GTTTAG-TC-----CC------CCT-TTATC---------TTTTAACTGACC--CAGGAGCAT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5673 40 -      8343 GTTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACT-CCAGGAGCAT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254688 40 - 186649187 GTTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACT-CCAGGAGCAT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    1850 40 -     78134 GTTTAG-TC-----CC------CCT-TTATC---------TTTTAACTGACC-CCAGGAGCAT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14560 40 -     40692 GTTTAG-TT-----CC------CCT-TCATT---------TTGTAACTGACT-CCAGGAGCAT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             35962 40 +     49394 GTTTAG-TT-----CC------CCT-TCATT---------TTGTAACTGACT-CCAGGAGCAT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60830 40 -     66874 GTTTAG-TT-----CC------CCT-TCATT---------TTGTAACTGACT-CCAGGAGCAT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9704 40 -     42923 GTTTAG-TT-----CC------CCT-TCATT---------TTGTAACTGACT-CCAGGAGCAT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16704 40 -     53142 GTTTAG-TT-----CC------CCT-TCATT---------TTGTAACTGACT-CCAGGAGCAT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30646 35 -    327341 -----A-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Helogale_parvula.HelPar_flattened_line_2585            I 5 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  8978 23 +     48891 ------------------------------C---------TTTTAACTGACC-CCAGGAGCAT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 3 C 0
s Heterocephalus_glaber.JH602082.1                         1932246 40 -  22651954 TCTTAG-CT-----CC------CCT-TTATC---------TTTTAACTGACC-CTAAGAGCAT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                 295 41 +      4291 GTTTAG-TT-----AC------CCT-TTGTC---------TTTTAACTGACCCCCAAGAGCAT
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7490 35 -     36432 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAAAGCAT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 5 C 0
s Hipposideros_armiger.JXIK01000431.1                      1554006 35 -   1711038 -----G-TT-----GC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGcat
i Hipposideros_armiger.JXIK01000431.1                    I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997                929 35 -      2730 -----G-TT-----GC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Hipposideros_galeritus.HipGal_scaffold_164997          I 2 C 0
s Hoolock_leuconedys.ctg274                                    142698 39 -    630532 GTTTAG-TT-----CC------TCT-TTATC---------TTTTAACTGACT--CAGGAGCAT
i Hoolock_leuconedys.ctg274                                 C 0 I 4815
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69562 35 +     83186 -----C-TT-----CC------TCT-TTATC---------TTCTAACTGACC-CCAAGAGCAT
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 5 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71713 40 +    143317 GTTTAA-CT-----CC------CGT-TTATG---------TTTTAACTGACC-CCAAGAGCTT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5732 39 +     12352 GTTTAG-TT-----CC------TCT-TTATC---------TTTTAACTGACT--CAGGAGCAT
i Hylobates_agilis.k141_1155965                          C 0 I 4834
s Hylobates_klossii.k141_738755                              12916 39 +     55766 GTTTAG-TT-----CC------TCT-TTATC---------TTTTAACTGACT--CAGGAGCAT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052516 39 + 191637585 GTTTAG-TT-----CC------TCT-TTATT---------TTTTAACTGACT--CAGGAGCAT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801394 39 +  11177569 GTTTAG-TT-----CC------TCT-TTATT---------TTTTAACTGACT--CAGGAGCAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4351 40 -    135385 GTTTAG-CT-----CT------TCT-TTATC---------TTTTAACTGACC-CCGAGAGCAT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386704 40 +   7955117 GTTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2260 40 +     11955 GTTTAG-TT-----CC------CGT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                3461 36 -     16823 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACCCCCAAGAGCAT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1239691 40 +   9596543 GTTTCG-TT-----CT------CCT-TTATC---------TTTTAACTGATC-CCCAAAACAT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65703 35 -     97402 -----G-TT-----CC------ACT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43131 40 +    110728 GTATAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62754 35 -     65777 -----G-TT-----CC------CCT-TTCTC---------TTTTAACTGACC-CCAAGAGCAT
i Lasiurus_borealis.LasBor_scaffold_16567                I 147 I 53
s Lemur_catta.scaffold_24                                 14759353 40 +  30322482 GTTTAG-TT-----CC------CCT-TCATT---------TTGTAACTGACT-CCAGGAGCAT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4045 40 -     13097 GTTTAG-TT-----TC------CCC-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3799 40 +      5940 GTTTAG-TT-----TC------CCC-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3629 40 -      5717 GTTTAG-TT-----TC------CCC-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10004 40 -     11567 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGCCT-CTAGGAGCGT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11385 40 -     12945 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGCCT-CTAGGAGCGT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8864 40 +     29618 GTTTAG-TT-----CC------CTT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8860 40 +     31569 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8870 40 +     24756 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8870 40 +     16388 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813377 35 -   3914936 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Leptonychotes_weddellii.KB714746.1                     I 5 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17731 39 +     24238 GTTTAG-T------TC------CTT-TTATC---------TTTTAACTGACC-CCAAGGGCAT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             334989 36 +    662738 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACCCCCAAGAGCGT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333751 40 -   1826925 GTTTAG-TT-----CC------CAT-TTATC---------TCTTAACTGACT-CCAGAAGCAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10449 40 +     19643 GTTTAG-TT-----CC------TCT-TCATT---------TTCTAACAGATT-CTAGGAGCAT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5044112 40 -   6120653 GTTTAG-TT-----CC------TCT-TCATT---------TTCTAACAGATT-CTAGGAGCAT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080893 39 +  43346337 GT-TAG-GT-----AC------CCT-TTATC---------TTTTAGCTGACC-CCAAGAGCAT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614516 35 +  59628241 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Lycaon_pictus.CM007581.1                               I 5 C 0
s Macaca_arctoides.k141_1757516                              45145 40 -     61512 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 372807 40 -  60120075 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25070 40 +     30207 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGAAGCAT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           22173 40 -     24934 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGAAGCAT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25023 40 +     30527 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36199 40 -     50087 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  45943 40 +     51645 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415145 40 - 187317192 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399376 40 +  25927173 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48548 40 -     62418 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1086 38 +     14901 GTTTAG-TT-----CC------CGT-TT--C---------TCTTAACTGACT-CCAGGAGCAT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45020 40 +     59329 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  270928 40 +    668171 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                 1204 40 +      1732 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2726 40 +     17132 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223061 35 -    270270 -----G-TT-----CC------CCT-TTATC---------TTTTAACCGACC-CCAAGAGCAT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322215 40 +  24302211 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357046 40 -    752769 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673410 35 -    737560 -----G-TC-----CC------CCT-TTATG---------TTTTAACTGACC-CCAAGCGTAT
i Manis_javanica.JSZB01003497.1                          I 5 C 0
s Manis_pentadactyla.KN006162.1                             220709 35 +    317179 -----G-TC-----CC------CCT-TTATG---------TTTTAACTGACC-CCAAGAGTAT
i Manis_pentadactyla.KN006162.1                          I 5 C 0
s Marmota_marmota.CZRN01000018.1                           7500924 40 +  40650429 GTTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150250 35 +    207569 -----A-TT-----GC------CCT-TTATC---------TTTTAACTGACC-CTATGAGCAT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26065 35 -     74585 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGAAC-CCAAGAGCAT
i Mellivora_capensis.MelCap_flattened_line_19308         I 5 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50033 40 -    140813 ATTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429132 40 +  29670104 ATTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     81288 36 +     93471 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACCCCCAAGAGCAT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10170 40 +     17804 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCCGCCT-CCAGGAGCAT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10671 39 -     12984 -TTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGCCT-CCAGGAGCAT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     18986 40 -     26561 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984472 40 +  93316391 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CTGGGAGCAT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46027 33 +    145209 GTA-AA-TT-----CC------CCT-TTATC---------TTTTAA----C---TAAGAGCAT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184938 35 +    200668 -----T-TT-----CC------CCT-TTCTT---------TTTTAACTGACC-TCAAGAGCAT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962333 40 +  27267610 ATTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCCAGAGCAT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363108 35 -   8254450 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42015 35 -     48117 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22232 40 -     27822 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8388 35 +     27589 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 5 C 0
s Mirza_zaza.k141_766280                                     52268 40 -     62432 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCTGGAGCAT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   353387 36 +    437263 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACCCCCAAGAGCAT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179161 35 +    366855 -----G-TT-----CC------CCC-TTTTT---------TTTCAACTGACC-CCAAGAGCAT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25412 35 -     82753 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CTAGGAGCAT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18397 35 -     63510 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Mungos_mungo.MunMun_flattened_line_18455               I 5 C 0
s Murina_feae.MurFea_scaffold_17764                          39073 35 +     47283 -----G-TT-----CC------CCT-TTATC---------TCTTAACTGACC-CCAAGAGCAT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593055 40 + 120012414 ATTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACC-CCAAGAGCAT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687441 40 + 129401213 ATTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACC-CCAAGAGCAT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39496733 40 + 130317789 ATTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACC-CCAAGAGCAT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83182 40 -     86153 GTTTAG-TT-----CC------TCT-TTATC---------TTTTAACTGACC-CCAGGAGCAT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355002 35 +  14710649 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Mustela_putorius.JH418006.1                            I 5 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63010 40 +     67721 GTTTAG-CT-----CC------CCT-TTATC---------TTTTAACTGACC-CCGAGAGCAT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793362 35 +  10118263 -----G-TT-----CC------TCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387492 35 +   6019432 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383319 35 +   4330536 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2128 35 +     18357 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119632 40 +    130748 GTTTAG-TT-----CC------CCT-TTATA---------TTTTAACTGACC-CCAAGAGCAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946168 40 +   3037898 ATTTAG-TT-----CC------TCT-TTATC---------GTTTAACTGACC-CCAAGAGTAT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28870 40 +     34575 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1227557 36 -   7148211 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACCCCCAAGAGCAT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128101 35 -    149072 -----G-TT-----AC------CCT-TTATC---------TTTTAACTGACC-CTGAGAGCAT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53624 39 -    132029 GTTTAG-TT-----CC------TCT-TTATC---------TTTTAACTGACT--CAGGAGCAT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9719 39 -     16345 GTTTAG-TT-----CC------TCT-TTATC---------TTTTAACTGACT--CAGGAGCAT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15604 39 +     22201 GTTTAG-TT-----CC------TCT-TTATC---------TTTTAACTGACT--CAGGAGCAT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8413825 39 -  22158432 GTTTTG-TT-----CC------TCT-TTATC---------TTTTAACTGACT--CAGGAGCAT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26002 39 -     54323 GTTTTG-TT-----CC------TCT-TTATC---------TTTTAACTGACT--CAGGAGCAT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198110 35 +   9404916 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 5 C 0
s Nycticebus_bengalensis.LG01                             93636474 40 + 196305487 GTTTAG-TT-----CC------TCT-TCATT---------TTCTAACAGATT-CTAGGAGTAT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3228 40 -      3937 GTTTAG-TT-----CC------TCT-TCATT---------TTCTAACAGATT-CTAGGAGTAT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564733 40 - 199412804 GTTTAG-TT-----CC------TCT-TCATT---------TTCTAACAGATT-CTAGGAGTAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2556718  1 -   3988456 --------------------------------------------------------------t
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11054959 40 -  11899542 GTTTAG-CT-----CC------CCT-TTATC---------TTTCAACTGACC-CCAAGAGCAT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451579 35 +   2017862 -----G-TT-----CT------CCT-TTATC---------TTTTCACTGACC-CCAAGAGCAT
i Odobenus_rosmarus.KB229312.1                           I 5 C 0
s Odocoileus_virginianus.KZ100018.1                         436183 35 -    630418 -----G-TT-----CC------CCT-TTATC---------TTTTAACCGACC-CCAGGAGCAT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14174 35 +    150152 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAGGAGCAT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92689 40 -    140218 ATTTAG-TT-----CC------CCT-TTACC---------TTTTAACTGACC-CCAAGAGCAT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3570 42 -     41509 ATTTAG-TT-----CC--C---CCT-TTATC---------TTTTAACTGACCCCCAAGAGCAT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096839 36 +  10937097 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACCCCCAAGAGCAT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13697 40 -     14239 GTTTAG-TT-----TC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103524 39 - 174332312 GTTTAG-T------TC------CCT-TTATC---------TTTTAACTGACC-CCAAGGGCAT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39156 35 +    559221 -----g-tt-----ct------ctt-ttatc---------ttttaactgaCC-CCAAGAGCAT
i Otocyon_megalotis.JAEUCK010005147.1                    I 5 C 0
s Otolemur_crassicaudatus.k141_649260                        40035 40 -     51505 GTTTAG-TT-----CC------TCT-TCATT---------TTCTAACAGACT-CTAGGAGCAT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             353037 40 +   1103335 GTTTAG-TT-----CC------TCT-TCATT---------TTCTAACAGACT-CTAGGAGCAT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404098 23 -  44047080 ------------------------------C---------TTTTAACTGACC-CCAGGAGCAT
i Ovis_aries.CM001607.2                                  I 3 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4617 23 +     17875 ------------------------------C---------TTTTAACTGACC-CCAGGAGCAT
i Ovis_canadensis.OviCan_scaffold_67953                  I 3 C 0
s Pan_troglodytes.CM009242.2                               1472717 40 - 189151597 GTTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACT-CCAGGAGCAT
i Pan_troglodytes.CM009242.2                             C 0 I 130
s Panthera_onca.PanOnc_flattened_line_3271                   24386 35 -    230217 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Panthera_onca.PanOnc_flattened_line_3271               I 5 C 0
s Panthera_pardus.KV860321.1                              18461712 35 -  18783137 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Panthera_pardus.KV860321.1                             I 5 C 0
s Panthera_tigris.KE722367.1                               3972371 35 +   8748460 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Panthera_tigris.KE722367.1                             I 5 C 0
s Pantholops_hodgsonii.KE114653.1                          1615613 35 +   2937107 -----g-tt-----ct------cct-ttatc---------ttttagcTGACC-CCAGGAGCAT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243048 40 - 183742232 GTTTAG-TT-----CC------CAT-TTATC---------TCTTAACTGACT-CCAGAAGCAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9510 40 +     21308 GTTTAG-TT-----CC------CAT-TTATC---------TCTTAACTGACT-CCAGAAGCAT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292083 40 -  20919399 GTTTAG-TT-----CC------CAT-TTATC---------TCTTAACTGACT-CCAGAAGCAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22158 40 -     27687 GTTTAG-TT-----CC------CAT-TTATC---------TCTTAACTGACT-CCAGAAGCAT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15304 40 +     16796 GTTTAG-TT-----CC------CAT-TTATC---------TCTTAACTGACT-CCAGAAGCAT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22115 40 -     23640 GTTTAG-TT-----CC------CAT-TTATC---------TCTTAACTGACT-CCAGAAGCAT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     14977 35 +     78924 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 5 C 0
s Perodicticus_ibeanus.k141_1921260                          26233 40 +     31479 CTTTAG-TT-----CC------TCT-TCATT---------TTCTAACAGACT-CCAGGAGCAT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18603 40 -     24908 GTTTAG-TT-----CC------TCT-TCATT---------TTCTAACAGACT-CCAGGAGCAT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1687 41 +      9367 CTTTAG-TT-----CC--C---CCT-CTATC---------TTTTAACTGACC-CCAAGAGCAC
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246769 40 +  18517816 ATTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31845 40 -     56120 GTTTAG-TT-----CT------CCT-CTATC---------TTTTAACTGACC-CCAAGAGCAT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12683 36 -     15039 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACCCCCAAGAGCAT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2328 40 +     55023 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         1878 40 -     89929 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2467 40 +     40849 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254131 40 +  14605196 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3666 35 +     22231 -----G-CT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64754 40 +    207309 GTTTAG-TT-----CC------CTT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5847 40 -     25401 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31590 40 +     58159 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31866 40 +     63561 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31626 40 +     51148 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556596 40 -   4542175 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31610 40 +     51125 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4773 35 -      8168 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CTAAGAGCAT
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8019 40 +     39866 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3103 40 -      9282 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42507 40 -     87950 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42901 40 -     88961 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7599 40 -     39403 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42550 40 +     87928 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7596 40 -     60166 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCCGGAGCAT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14533 40 -     67232 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42449 40 -     90634 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43916 40 +     89403 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCCGGAGCAT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177839 38 - 189387572 GTTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACT-CCAGGAgc--
i Pongo_abelii.CM009266.2                                C 0 I 6411
s Pongo_pygmaeus.ctg66                                      192656 38 -   9816681 GTTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACT-CCAGGAGC--
i Pongo_pygmaeus.ctg66                                   C 0 I 6336
s Presbytis_comata.k141_1230337                              27453 40 +     69807 GTTTAG-TT-----CT------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44639 40 -     80239 GTTTAG-TT-----CC------CCT-TTGTC---------TCTTAACTGACT-CCAGGAGCAT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                   68 41 +      7663 GTTTAG-TT-----AC------CCT-TTGTC---------TTTTAACTGACCCCCAAGAGCAT
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982501 40 +   4620579 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Prolemur_simus.MPIZ01000396.1                          I 22 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566009 40 -   2598838 GTTTAG-TT-----CC------CGT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3647 40 -      7103 GTTTAG-TT-----CC------CGT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4244 40 -     11706 GTTTAG-TT-----CC------CGT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            7982 40 -     30655 GTTTAG-TT-----CC------CGT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34295 40 +     46564 GTTTAG-TT-----CC------CGT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94574 40 -     98465 GTTTAG-TT-----CC------CGT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8213 40 +     35169 GTTTAG-TT-----CC------CGT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37376 40 +     52041 ATTTAG-TT-----TC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52055 35 -     66298 -----g-tt-----cc------cct-ttctt---------ttttaactgacC-CCAAGAGCAT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4569 35 -     18639 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 5 C 0
s Pteropus_alecto.KB030862.1                               5840745 35 -  28871421 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537264 35 -   4952924 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099029 35 +  38429054 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Puma_concolor.QAVW01001104.1                           I 5 C 0
s Pygathrix_cinerea.k141_1153803                             26827 40 +     91421 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153319 40 -   7812017 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7694 40 +     72585 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53101 35 +     55069 -----G-TT-----CC------CCT-TTATC---------TTTTAACCGACC-CCAGGAGCAT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022660 40 -  90668790 ATTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACC-CCAAGAGCAT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914642 35 +   3329780 -----G-TT-----GC------CCT-TTATC---------TTTTAACTGACC-CCAAGAgcat
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 C 0
s Rhinopithecus_bieti.k119_778604                             1400 40 +      7119 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122008 40 + 195417433 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236250 40 -   7961872 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74678 35 -    116970 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGATC-CCAAGAGCAT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3908 40 +     27962 GTTTAG-TT-----TC------CCG-GTATC---------TTTTATCTGACT-CCAGGAGCAT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3803 40 +      6077 GTTTAG-TT-----TC------CCG-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3893 40 +      5971 GTTTAG-TT-----TC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3814 40 +      5932 GTTTAG-TT-----TC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2156 40 -      4390 GTTTAG-TT-----TC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391593 40 - 209938924 GTTTAG-TT-----TC------CCG-GTATC---------TTTTATCTGACT-CCAGGAGCAT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3763 40 +      5979 GTTTAG-TT-----TC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                332 40 -     22275 GTTTAG-TT-----TC------CCG-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7774 35 +     16473 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAGGAGCAT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108930 40 + 121099817 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CTATGAGCAT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30497 40 -     47369 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CTATGAGCAT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30883 40 -     79414 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CTATGAGCAT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27574 40 -     34454 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CTATGAGCAT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              14975 40 -     22428 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CTATGAGCAT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30129 40 -     47109 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CTATGAGCAT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238183 40 +   5703754 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7773 40 +     21866 GTTTAG-TT-----CC------CCT-GTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115816 35 +    313613 -----G-TT-----CC------TCT-TTATC---------TTTTAACTGACC-CCACGAGCAT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25146 40 +     27374 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28660 40 +     58920 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15156 40 -     45317 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            22815 40 -     42441 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25493 40 -     29113 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28567 40 -     48123 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49145 41 +     77746 ATTTAG-TT-----CC------CATTTTCTC---------TTTTAACTGACC-CCAAGAGCAT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864095 40 -   1910179 gttgat-cc-----ct------ctt-ttatc---------ttttaACTGACT-CCAAGAGCAT
i Solenodon_paradoxus.SolPar_flattened_line_126          I 5921 C 0
s Sorex_araneus.JH798187.1                                 4671249 37 +  18376816 -----G-TT-----CAGT---T-CT-TTATC---------TTTTAACTGACC-CAGGGAGCAA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868283 40 +   3870691 GTTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6639 35 -     97271 -----G-AT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124799 35 +    196729 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Suricata_suricatta.SurSur_flattened_line_6629          I 5 C 0
s Sus_scrofa.CM000828.4                                    6643684 40 +  69701581 -----G-TTGAATTTC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391086 39 +   1523678 GTTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACT--CAGGAGCAT
i Symphalangus_syndactylus.tarseq_199                    C 0 I 4789
s Tadarida_brasiliensis.TadBra_scaffold_54991                14230 35 +     22964 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2621 40 +      5583 GTTTAG-TT-----CC------CCT-TTATA---------TTTTAACTGACC-CCAAGAGCAT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191533 35 +    199430 -----G-TT-----CC------TCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Tapirus_indicus.TapInd_scaffold_7432                   I 5 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105503 35 -    539355 -----G-TT-----CC------TCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Tapirus_terrestris.TapTer_scaffold_755                 I 5 C 0
s Tarsius_lariang.k141_1733899                                 546 40 +      9917 GTTTAG-TT-----CA------CCT-TTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7336 40 +     20590 GTTTAG-TT-----CA------CCT-TTATC---------TTTTAGCTGACT-CCAGGAGCAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353034 40 - 186847797 GTTTAG-TT-----CC------CGT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24001 40 -     33621 GTTTAG-TT-----CT------CCT-CTATC---------TTTTAACTGACC-CCAAGAGCAT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19719 40 -     31044 GTTTAG-TT-----CC------CTT-TTATA---------TTTTAACTGACC-CCAGGAGCAT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480051 35 -    610378 -----G-TT-----CC------CCT-TTCTT---------TTTAAACTGACC-CCAAGGGCAT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20692 40 +     26378 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33370 40 -     78344 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20017 40 +     25722 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28323 40 -     62838 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           28368 40 +     46913 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9175 40 -     28527 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30259 40 -     64340 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28296 40 -     63452 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9742 40 +     22490 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3167 40 -      6147 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10072 40 -     13050 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255312 40 -   6242583 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1336 40 +     19340 GTTTAG-TT-----CC------CCT-TTATC---------TCTTAACTGACT-CCAGGAGCAT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173386 35 -    200418 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480359 40 -  10818551 GTTTAG-TT-----AC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834031 39 -   4065304 GCTTAG-TC-----CC------CC--TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8051 40 -     70247 GCTTAG-TC-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361584 36 -  33153633 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACCCCCAAGAGCAT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3556 35 -     21056 -----G-TT-----CA------CCT-TTATC---------TTTTAACTGACC-CCTAGAGCAT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181744 35 +   5085361 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Ursus_maritimus.KK499267.1                             I 5 C 0
s Varecia_rubra.k141_787544                                  25150 40 -     30710 GTTTAG-TT-----TC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24057 40 -    147434 GTTTAG-TT-----CC------CCT-TCATT---------TTTTAACTGACT-CCAGGAGCAT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76221 35 +   5488506 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Vicugna_pacos.KN270157.1                               I 5 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104878 35 -    112863 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Vulpes_lagopus.VulLag_flattened_line_12041             I 5 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174070 40 -    224448 GTTTAG-TT-----CC------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28774 35 -     86975 -----G-TT-----CT------CCT-TTATC---------TTTTAACTGACC-CCAAGAGCAT
i Zalophus_californianus.ZalCal_flattened_line_17732     I 5 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                       542 40 -       833 GTTTTG-TT-----CC------TCT-TTATC---------TATTAACTGACC-CCAGGAGCAT
i Zapus_hudsonius.ZapHud_scaffold_501999                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595             991 36 +      1812 -----G-TT-----CC------CCT-TTATC---------TTTTAACTGACCCCCAAGAGCAT
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5413 53 +     36723 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AAAGAATTATC
s Acinonyx_jubatus.LLWD01001279.1                           812806 53 +   1699592 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25081 53 +     63021 TAGCAAA--AAGTGTAG-AAATATGAAT-GC--AGGTGAG--------GTAATAAT--GAGGAATTATC
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415265 53 +  29979442 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215574 53 +    347723 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18025 52 -     61208 TCATGAA--AATCATAT-AAATATAAAT-GC--AAGTGAA--------GTA-TAAG--GAATAATTATC
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47729 47 +     53615 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Allenopithecus_nigroviridis.k141_3755588               C 0 I 6
s Allochrocebus_lhoesti.k141_441277                          43711 53 +     44087 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16319 47 -     21945 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Allochrocebus_preussi.k141_1993939                     C 0 I 6
s Allochrocebus_solatus.k141_3554717                         18002 47 +     32033 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Allochrocebus_solatus.k141_3554717                     C 0 I 6
s Alouatta_belzebul.k141_1011583                             72166 53 -     84148 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44405 53 -     78289 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43844 53 +     55831 TAATGAA--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42294 53 -     64179 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23928 53 -     24835 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40919 53 +     45454 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTATA--------GTAATAAA--AGAGAATTATC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46568 53 +     70886 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8741 53 +     30854 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32875 53 +     42133 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585254 53 +   2318259 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--GGAGAATTATC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177044 53 -    412891 TAATGAA--AAGTATCT-ACATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50361 53 -     68529 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1121 53 +     17741 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATATA--AGAGAATTATC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1746 53 -     15923 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672028 53 +   5030052 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--AGAGAATTATC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2022 53 -     16391 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1581 53 -     17186 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15943 53 -     32367 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19478 53 -     45910 TAATGAA--AAGTACAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5322 53 -     15198 TAATGAA--AAGCATCT-AAATATAAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274620 53 +  21539123 TAGTGGA--AAGTATAT-AAATATACAT-AC--AGGTGTA--------GTAGTAAA--AGGGAATTATC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10786 53 +     48076 TAATGGA--AAGTATAT-AAATATACAT-AC--AGGTGTA--------GTAGTAAA--AGGGAATTATC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5923 53 -     28759 TAATGGA--AAGTATAT-AAATATACAT-AC--AGGTGTA--------GTAGTAAA--AGGGAATTATC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33477 53 +     44353 TAGTGGA--AAGTATAT-AAATATACAT-AC--AGGTGTA--------GTAGTAAA--AGGGAATTATC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48846 53 -     71267 TAATGGA--AAGTATAT-AAATATACAT-AC--AGGTGTA--------GTAGTAAA--AGGGAATTATC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22906 53 -     33135 TAATGGA--AAGTATAT-AAATATACAT-AC--AGGTGTA--------GTAGTAAA--AGGGAATTATC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6152 53 +     11645 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6160 53 -     19611 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7957143 53 -  23207421 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         4352 53 -      4711 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86262 53 +    124022 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21795 53 +    288883 Tagtaaa--aagtatat-aaatatgaat-ac--agGTATA--------GTAATAAA--GGAGAATTATC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356188 53 +  48749331 Tagtaaa--aagtatat-aaatatgaat-ac--agGTATA--------GTAATAAA--GGAGAATTATC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754751 53 +   1948126 tagtaaa--aagtatat-aaatatgaat-ac--agGTATA--------GTAATAAA--GGAGAATTATC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544894 53 -  45695690 Tagtaaa--aagtatat-aaatatgaat-ac--agGTATA--------GTAATAAA--GGAGAATTATC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529914 53 -   4408762 TAatgaa--aagtatat-aaatatgaat-ac--agGTATA--------GTAATAAA--GGAGAATTATC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7796 51 +     28062 TAATGAA--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAA----GAGAATCATC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43090 51 -     91139 TAATGAA--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAA----GAGAATCATC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20616 51 +     95584 TAATGAA--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAA----GAGAATCATC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20529 51 +    119600 TAATGAA--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAA----GAGAATCATC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10101 53 +     18648 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--CGAGAATTATC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9636 53 -     13885 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1706 53 -      8861 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454099 53 + 189096842 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1622 53 +      8664 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630922 53 +  17673402 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAT--GGAGAATTATC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665208 53 +   7040546 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAT--GGAGAATTATC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208868 53 +   1652518 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAT--GGAGAATTATC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505282 53 +  60362399 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8918 53 -     23171 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222261 53 +   9314153 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615396 53 +  59632846 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45106977 53 -  63665305 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27408983 53 -  46296322 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--GGAGAATTATC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591257 53 +  44709034 TAAtgaa--aagtatat-aaatatgaat-ac--aGGTGTA--------GTAATAAA--GGAGAATTATC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1471 52 -      1880 TAATGAA--AAGTGTAT-AAATATGAAT-AC--T-ATGTA--------GTAATAAA--GGGGAATTATC
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270359 53 +    496798 TAatgaa--aagtatat-aaatatgaat-aC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                160 53 +      9923 TAATGAA--AAGCATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27603 53 -     39886 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAACTATC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79458 53 -    217609 TAATGAA--GAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAAAATTACC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996317 53 +  23392119 TAATGAA--AAGCGTAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999759 53 +  23407841 TAATGAA--AAGCGTAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62840 53 -     66877 TAATGAA--AAGCGTAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5019 53 -     12580 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43077 53 +     53515 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371007 53 -  26074798 TAATGAA--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7896 53 -     34880 TAATGAA--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                66991 53 -     89041 TAATGAA--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2323 53 -      5494 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492093 53 -  27778364 TAATGAA--AAGTATCT-AAATACCAAT-AC--AGGTGTT--------GTAATAAA--GGAGAAGTATC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18926 53 +     27315 TAATGAA--AAGTATCT-AAATACCAAT-AC--AGGTGTT--------GTAATAAA--GGAGAAGTATC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140906 47 -   4669795 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--AGAGA------
i Cercocebus_atys.KQ010504.1                             C 0 I 6
s Cercocebus_chrysogaster.k141_1522556                       44648 53 +     47900 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44472 53 -     44860 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44461 47 -    148725 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Cercocebus_torquatus.k141_2159127                      C 0 I 6
s Cercopithecus_ascanius.k141_3120866                        26648 47 -     40656 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Cercopithecus_ascanius.k141_3120866                    C 0 I 6
s Cercopithecus_cephus.k141_4183004                           6614 47 +     20796 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Cercopithecus_cephus.k141_4183004                      C 0 I 6
s Cercopithecus_diana.k141_132293                            11731 47 -     17524 TAATAAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Cercopithecus_diana.k141_132293                        C 0 I 6
s Cercopithecus_hamlyni.k141_566925                          27453 47 -     34525 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Cercopithecus_hamlyni.k141_566925                      C 0 I 6
s Cercopithecus_lowei.k141_2101310                           11235 47 -     25376 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Cercopithecus_lowei.k141_2101310                       C 0 I 6
s Cercopithecus_albogularis.ctg5                                  363830 47 -  39242232 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Cercopithecus_albogularis.ctg5                               C 0 I 6
s Cercopithecus_mona.ctg39                                  269547 47 +  21565898 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Cercopithecus_mona.ctg39                               C 0 I 6
s Cercopithecus_neglectus.k141_858615                        31920 47 -     45857 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Cercopithecus_neglectus.k141_858615                    C 0 I 6
s Cercopithecus_nictitans.k141_2995370                       26819 47 -     32606 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Cercopithecus_nictitans.k141_2995370                   C 0 I 6
s Cercopithecus_petaurista.k141_42573                         2978 47 +      8499 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Cercopithecus_petaurista.k141_42573                    C 0 I 6
s Cercopithecus_pogonias.k141_6079                           25375 47 +     70610 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Cercopithecus_pogonias.k141_6079                       C 0 I 6
s Cercopithecus_roloway.k141_3012935                         22345 47 +     36323 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Cercopithecus_roloway.k141_3012935                     C 0 I 6
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12670 53 -     19938 TCAGGAG--AAGTGCCT-AAACAGGAAC-AC--AGGTGTA--------CTAATAAA--TGAGAATTATC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30528 53 -     33796 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5045 53 -     15404 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8894 53 -     32913 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATCATC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19307 53 -     40346 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------ATAATAAA--AGAGAATCATC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19562 53 +    216457 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATCATC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19355 53 +     39636 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATCATC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238695 52 -   2543920 TAATGAA--AAGTGTAT-AAATATGAAT-AC--T-GTGTA--------GTAATAAA--GGAGAATTATC
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           3950 53 +      5346 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GCAATAA-AA-GAGAATTATC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42427 51 -    112038 TAATGAA--AAGTATAT-ACGTATGAAT-AC--AGGTGTA--------GTAATAA----GAGAATCATC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           7998 51 +     34062 TAATGAA--AAGTATAT-ACGTATGAAT-AC--AGGTGTA--------GTAATAA----GAGAATCATC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343236 47 +  18827391 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Chlorocebus_aethiops.ctg25                             C 0 I 6
s Chlorocebus_pygerythrus.k141_3063162                        9783 47 -     44032 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Chlorocebus_pygerythrus.k141_3063162                   C 0 I 6
s Chlorocebus_sabaeus.CM001947.1                            304560 47 - 135778131 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--AGAGA------
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 6
s Choloepus_didactylus.ChoDid_scaffold_70559                 14710 53 +     15858 TAATGGA--AAATATCT-AAATATGAAT-AC--AGGTGTA--------GTAATGAA--CGAGTATTATC
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606285 53 -    839153 TAATGGA--AAATATCT-AAATATGAAT-AC--AGGTGTA--------GTAATGAA--CGAGTATTATC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                703 53 +      2406 TAATGGA--AAGTATCT-AAATATCAAT-AT--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             408985 47 -   2368649 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--AGAGA------
i Colobus_angolensis.KN981557.1                          C 0 I 6
s Colobus_guereza.LG01                                      378861 47 - 200372422 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Colobus_guereza.LG01                                   C 0 I 6
s Colobus_polykomos.k141_906115                               2410 47 -     84244 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Colobus_polykomos.k141_906115                          C 0 I 6
s Condylura_cristata.JH655891.1                           35807161 53 +  53390261 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2677 42 -      8242 TAATGAA--AAGTCTCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA-------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 8
s Cricetomys_gambianus.CriGam_scaffold_14425                 44222 53 -     83289 TAGCAAA--AAGTGTAG-GAATATGAAT-GC--AGGTGAA--------GTAATAAG--GAAGAATTATC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114786 53 - 224834208 CAGCAAA--AAGTATGG-AAATATGAAT-GC--AGGTGAA--------GTAATAAG--GAAGAATTATC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9371 53 +     12657 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAAAATTATC
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4251 53 +     87169 TAATGAA--AAGTATCT-AAATATGAAT-AC--CGGTGTA--------GTAATAAA--GGAGAATTATC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644917 53 -   1526836 TAATGAA--AAGTGTAT-AAATACGAAT-AC--AGGTGTA--------GCAATAAA--GGAGAATTATC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18262 52 +     50838 TAATGAA--AAGTGTAT-AAATATGAAT-AC--T-ATATA--------GTAATAAA--GGGGAATTATC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4240 53 +     36344 TAATGAA--AAGTGTAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GTAGAATTATC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28016 53 +     75252 TAATGAA--AAGTGTAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110020 53 -   2246927 TCAGGAG--AAGTGCCT-AAATAGGAAC-AC--AGGTGCA--------CTAATAAA--TGAGAATTATC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292466 53 +  12879189 CAGTGAA--AAGTATAT-AAATAGGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625680 53 -  35494412 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330360 53 -   2620052 TAAAGAA--AAGTATCT-AAATATGAAT-AC--AAGTGTA--------GTAATAAA--GGAGAATTATC
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664375 53 -   1390856 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTC--------ATAATAAA--GGAGAAGTATC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139170 53 -    198055 TAATGAA--AAGTATCT-AAATACGAAT-AC--AGGTGTT--------GTAATAAA--GGAGAAGTATC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98781 52 -    115145 TAATGAA--AAGTGTAT-AAATATGAAT-AC--T-GTGTA--------GTAATAAA--GGAGAATTATC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950399 53 -  37912305 TAATGCA--AAGTATAT-AAATATGAGC-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5337 53 -     10735 TAATGCA--AAGTATAT-AAATATGAGT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10276 53 +     14636 TAATGAA--AAGTGTAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62854975 53 - 111700974 TACTGGA--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTACTAAA--GAAGAATTATC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6132 53 +     19438 TAATGAC--AAGTATCT-AAATAGGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239623 53 -    607251 Taatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--GGAGAGTTATC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108642 55 -  10337057 TAATGGAAAAAGTATCT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--GGAGAATTATC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30934 53 +    110024 TAGCAAA--AACTGTAG-AAATATGAAT-GC--AGGTGAA--------ATAATAAG--GAAGAATTATC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12905 53 +     18970 TAGCAAA--AACTGTAG-AAATATGAAT-GC--AGGTGAA--------ATAATAAG--GAAGAATTATC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916003 53 +  41312741 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578794 53 +  14770903 TAATGAA--AAGTATCT-AAATATGAAC-AC--AAATGTA--------GTAATAAA--GGAGAATTATC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041254 53 -   4378816 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375192 53 +  39960074 TAATGAA--AAGTATCT-AAATATGACT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             573 53 -      1194 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3665957 53 +   7059049 TAATGAA--AAGTATCT-AAATAGGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262763 47 +  21539334 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Erythrocebus_patas.Contig38                            C 0 I 6
s Eschrichtius_robustus.EscRob_flattened_line_8968           65019 53 -    133382 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             5238 53 +      7672 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14675 53 -     24895 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTATA--------GTAATAAA--AGAGAATTATC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42384 53 -     70999 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTATA--------GTAATAAA--AGAGAATTATC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86346 53 +    112731 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTATA--------GTAATAAA--AGAGAATTATC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42915 53 +     68309 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTATA--------GTAATAAA--AGAGAATTATC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53241 53 -     65740 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTATA--------GTAATAAA--AGAGAATTATC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23870 53 -     75513 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTATA--------GTAATAAA--AGAGAATTATC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48068 53 -     97555 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTATA--------GTAATAAA--AGAGAATTATC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4792 53 +     30972 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTATA--------GTAATAAA--AGAGAATTATC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42512 53 -     52037 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTATA--------GTAATAAA--AGAGAATTATC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58914 53 -    111500 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTATA--------GTAATAAA--AGAGAATTATC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246715 53 - 206538554 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116501 53 - 205367284 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27598 53 -     30238 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916317 53 -   3816255 taataaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--GGAGAATTATC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     124913 53 -    137831 TAATGAA--AAGTACAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8458 53 +     22493 TAATGAA--AAGTACAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20530 53 -     32986 TAATGAA--AAGTACAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1070 53 -     28519 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91326 53 -     95226 Taatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--GGAGAATTATC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34395 53 -     36801 TAGTGAA--AAGTGTAT-AAATATGAAT-AC--AGGTGTA--------GTCATAAA--GGAGAATTATC
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5713 53 -      8343 TAATGAA--AAATATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AAAGAATTATC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254728 47 - 186649187 TAatgaa--aagtatat-aaatatgaat-ac--aggtgta--------gtaataaa--aaaga------
i Gorilla_gorilla.LT578341.1                             C 0 I 6
s Graphiurus_murinus.GraMur_scaffold_10447                    1890 53 -     78134 TAGTGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTT--------GTCATAAA--GGAGAATTATC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14600 53 -     40692 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36002 53 +     49394 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60870 53 -     66874 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9744 53 -     42923 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16744 53 -     53142 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30681 53 -    327341 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGCA--------GTAATAAA--AGAGAATTATC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9001 53 +     48891 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932286 53 -  22651954 TAAtgaa--atatgtgt-aaatatgaat-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                 336 53 +      4291 TAATGGC--AGGGATCT-AAATATGAAC-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7525 53 -     36432 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATACA--GGAGAATTATC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1554041 29 -   1711038 taatgaa--aaatatct-aaatatgaaT-AN--GG----------------------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 T 2335
s Hipposideros_galeritus.HipGal_scaffold_164997                964 53 -      2730 TAATGAA--AAATATCT-AAATATGAAT-AC--AGGTATA--------CTAATAAA--GGAGAATTATC
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    147552 47 -    630532 TAATGAA--AAGTACAT-AAATATGAAT-AC--AGATGTA--------GTAATAAAAGAGA--------
i Hoolock_leuconedys.ctg274                                 I 4815 T 4809
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69597 53 +     83186 TAATGAA--AAGCATCT-AAATATGAAT-AC--AGGTGTA--------GTCATAAA--GGAGAATTATC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71753 53 +    143317 TAATGAA--AAGTGTAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                              10605 47 +     12352 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGATGTA--------GTAATAAAAGAGA--------
i Hylobates_agilis.k141_1155965                          I 4834 T 4828
s Hylobates_klossii.k141_738755                              12955 47 +     55766 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AAAGA------
i Hylobates_klossii.k141_738755                          C 0 I 6
s Hylobates_pileatus_b.LG02                                       2052555 47 + 191637585 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AAAGA------
i Hylobates_pileatus_b.LG02                                     C 0 I 6
s Hylobates_pileatus_a.tarseq_633                            7801433 47 +  11177569 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AAAGA------
i Hylobates_pileatus_a.tarseq_633                          C 0 I 6
s Hystrix_cristata.HysCri_scaffold_5660                       4391 53 -    135385 TAATGAA--AAGTGTAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386744 53 +   7955117 Taatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--GGAGAATTATC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2300 53 +     11955 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                3497 53 -     16823 TAATGAA--AAGTATCT-AAACAGGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1239731 52 +   9596543 TCATGAA--AAGCATGT-AAATATAAAT-GC--Aggtgaa--------gta-taag--aaataatCATC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65738 53 -     97402 TAAGGGA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43171 53 +    110728 TAATGGA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGGGAATTATC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    32059 53 -     49555 TAGTGAA--AAGTATCT-AAATATGAAC-AC--ACGTGTA--------GTAATAAA--GGAGAGTTATC
i Lasiurus_borealis.LasBor_scaffold_26245                I 35 I 205
s Lemur_catta.scaffold_24                                 14759393 53 +  30322482 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4085 53 -     13097 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--AGAGAATTATC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3839 53 +      5940 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--AGAGAATTATC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3669 53 -      5717 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--AGAGAATTATC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10044 53 -     11567 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11425 53 -     12945 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8904 53 +     29618 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8900 53 +     31569 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8910 53 +     24756 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8910 53 +     16388 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813412 53 -   3914936 TAATGAA--AAGTATCT-AAATACGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17770 53 +     24238 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGGA--------GTAATAAA--GGAAAATTATC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             335025 53 +    662738 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAG--GGAGAATTATC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333791 47 -   1826925 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Lophocebus_aterrimus.ctg367                            C 0 I 6
s Loris_lydekkerianus.k141_2031736                           10489 53 +     19643 TAATGAA--AAGTACAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5044152 53 -   6120653 TAATGAA--AAGTACAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080932 53 +  43346337 TAATGGA--AAGCATCT-AAATATGAAC-AC--AGGTGTA--------GTAATAAA--GGAAAATTATC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614551 53 +  59628241 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45185 47 -     61512 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Macaca_arctoides.k141_1757516                          C 0 I 6
s Macaca_assamensis.Contig5                                 372847 47 -  60120075 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Macaca_assamensis.Contig5                              C 0 I 6
s Macaca_cyclopis.k119_263443                                25110 47 +     30207 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Macaca_cyclopis.k119_263443                            C 0 I 6
s Macaca_fascicularis.k141_1397292                           22213 53 -     24934 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25063 47 +     30527 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Macaca_fuscata.k119_546792                             C 0 I 6
s Macaca_leonina.k141_321385                                 36239 47 -     50087 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Macaca_leonina.k141_321385                             C 0 I 6
s Macaca_maura.k141_1103459                                  45983 47 +     51645 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Macaca_maura.k141_1103459                              C 0 I 6
s Macaca_mulatta.NC_041758.1                                415185 47 - 187317192 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--AGAGA------
i Macaca_mulatta.NC_041758.1                             C 0 I 6
s Macaca_nemestrina.KQ007038.1                              399416 47 +  25927173 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--AGAGA------
i Macaca_nemestrina.KQ007038.1                           C 0 I 6
s Macaca_nigra.k141_2818840                                  48588 47 -     62418 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Macaca_nigra.k141_2818840                              C 0 I 6
s Macaca_radiata.k141_2139468                                 1124 47 +     14901 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Macaca_radiata.k141_2139468                            C 0 I 6
s Macaca_siberu.k141_2185972                                 45060 47 +     59329 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Macaca_siberu.k141_2185972                             C 0 I 6
s Macaca_silenus.Contig273                                  270968 47 +    668171 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Macaca_silenus.Contig273                               C 0 I 6
s Macaca_thibetana.k99_503078                                 1244 53 +      1732 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2766 47 +     17132 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Macaca_tonkeana.k141_339739                            C 0 I 6
s Macroglossus_sobrinus.MacSob_scaffold_4024                223096 53 -    270270 TAATGAC--AAATATCT-AAATAGGAAT-AC--AGATGTA--------GTAATAAA--GGAGAATTATC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322255 47 +  24302211 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Mandrillus_leucophaeus.scaffold280                     C 0 I 6
s Mandrillus_sphinx.Contig270                               357086 47 -    752769 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Mandrillus_sphinx.Contig270                            C 0 I 6
s Manis_javanica.JSZB01003497.1                             673445 53 -    737560 TAATGAG--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220744 53 +    317179 TAATGAG--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7500964 53 +  40650429 Taatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--GGAGAATTATC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150285 42 +    207569 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA-------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 8
s Mellivora_capensis.MelCap_flattened_line_19308             26100 53 -     74585 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50073 53 -    140813 TAGCAAA--AAGTGTAG-AAATATGAAT-GC--GGGTGAA--------GTAATAAG--GAAGAATTATC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429172 53 +  29670104 CAGCAAA--AAGTGTGG-AAATATGAAT-AC--AGGTGAA--------GTAATAAG--GAAGAATTATC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     81324 53 +     93471 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGATGTA--------GTAATAAA--GGAGAATTATC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10210 51 +     17804 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA----AGAATTATC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10710 51 -     12984 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA----AGAATTATC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19026 51 -     26561 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA----AGAATTATC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984512 53 +  93316391 Taatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--AGAGAATTATC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46060 53 +    145209 TAATGGA--AAGTGGGT-ACATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                184973 53 +    200668 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAACAAA--GGAGAATTATC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962373 53 +  27267610 TAGCAAA--AGCTGCAG-AAATATGAAT-GC--AGGTGAA--------GTAATAAG--GAAGAATTATC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363143 53 -   8254450 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--GGAGAATTATC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42050 53 -     48117 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--GGAGAATTATC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22272 47 -     27822 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Miopithecus_ogouensis.k141_1534655                     C 0 I 6
s Mirounga_angustirostris.MirAng_flattened_line_54046         8423 53 +     27589 TAATGAA--AAGTATCT-AAATACGAAT-AC--AGGTGTA--------GAAATAAA--GGAGAATTATC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52308 53 -     62432 TAATGAA--AAGTATAT-AAATACGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   353423 53 +    437263 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179196 53 +    366855 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGCTGTA--------GTAATCAA--GGAGAACTCTC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25447 53 -     82753 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18432 53 -     63510 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGCA--------GTAATAAA--GGAGAATTGTC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39108 53 +     47283 TAATGCA--AAGTATCT-AAATATGAAT-AC--ATGTGTA--------GTAATAAA--GGAGAATTATC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593095 53 + 120012414 TAGCAAA--AAGTGTAG-AAATATGAAT-GC--AGGTGAA--------GTAATAAG--GAAGAATTATC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687481 53 + 129401213 TAGCAAA--AAGTGTAG-AAATATGAAT-GC--AGGTGAA--------GTAATAAG--GAAGAATTATC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39496773 53 + 130317789 TAGCAAA--AAGTGTAG-AAATATGAAT-GC--AGGTGAA--------GTAATAAG--GAAGAATTATC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83222 52 -     86153 TAGTGGA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTCATAAA--GGAG-ATTATC
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355037 53 +  14710649 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63050 52 +     67721 TAATGAA--AAGTGTAT-AAATATGAAT-AC--T-GTGTA--------GTAATAAA--GGGGAATTATC
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793397 53 +  10118263 TAATGAA--AAGTATCT-AAATATGAAT-AC--ATGTGTA--------GTAATAAA--GGAGAATTATC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387527 53 +   6019432 TAATGAA--AAGTATCT-AAATATGAAT-AC--ATGTGTA--------GTAATAAA--GGAGAATTATC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383354 53 +   4330536 TAATGAA--AAGTATCT-AAATATGAAT-AC--ATGTGTA--------GTAATAAA--GGAGAATTATC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2163 53 +     18357 TAATGAA--AAGTATCT-AAATATGAAT-AC--ATGTGTA--------GTAATAAA--GGAGAATTATC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119672 53 +    130748 TAATGAA--AAGTGTCT-AAATATGAAC-AC--AGGTGTG--------GTAATGAA--CGAGAATTATC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946208 53 +   3037898 TAATGAA--AACTGTAT-AAATATGAAT-AC--AGGTGAA--------GTAATAAT--GAAGAATTATC
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28910 47 +     34575 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Nasalis_larvatus.k141_1350636                          C 0 I 6
s Neophocaena_asiaeorientalis.KZ687982.1                   1227593 53 -   7148211 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTATA--------GTAATAAA--GGAGAATTATC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128136 53 -    149072 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53663 47 -    132029 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AAAGA------
i Nomascus_annamensis.k141_1771965                       C 0 I 6
s Nomascus_concolor.k141_735679                               9758 47 -     16345 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AAAGA------
i Nomascus_concolor.k141_735679                          C 0 I 6
s Nomascus_gabriellae.k141_57920                             15643 47 +     22201 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AAAGA------
i Nomascus_gabriellae.k141_57920                         C 0 I 6
s Nomascus_siki_b.tarseq_93                            8413864 47 -  22158432 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AAAGA------
i Nomascus_siki_b.tarseq_93                          C 0 I 6
s Nomascus_siki_a.k141_941534                                  26041 47 -     54323 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AAAGA------
i Nomascus_siki_a.k141_941534                              C 0 I 6
s Nyctereutes_procyonoides.CAJHUB010000658.1                198145 53 +   9404916 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636514 53 + 196305487 TAATGAA--AAGTACAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3268 53 -      3937 TAATGAA--AAGTACAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564773 53 - 199412804 TAATGAA--AAGTACAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2556719 61 -   3988456 taatgga--AACTATAg-ggaaagaagt-aa--aagaaaaattttttgttGACAAA--TGAAAATTCTA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11054999 52 -  11899542 TAATGAA--AAGTGTAT-AAATATGAAT-AC--T-GTGAA--------GTAATAAA--AGGGAATTATC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451614 53 +   2017862 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436218 53 -    630418 Taatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--GGAGAATTATC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14209 53 +    150152 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--GGAGAATTATC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92729 53 -    140218 TAGCAAA--AACTGTAG-AAATATGAAT-GC--AGGTGAA--------GTAATAAG--GAAGAATTATC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3612 53 -     41509 TAGCCGA--AAGTGTAG-ACCTAGGAAG-GC--AGGTGAA--------GTAATAAG--GAAGAATTATC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096875 53 +  10937097 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13737 53 -     14239 TAATGGA--AAGTATCT-AAATATGAAC-AC--AGGTGTG--------GCAATAAA--GGAGAATTATC
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103563 53 - 174332312 TAatgaa--aagtatat-aaatatgaat-ac--agGTGGA--------Gtaataaa--ggaaaattatc
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39191 53 +    559221 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40075 53 -     51505 TAATGAA--AAGTACAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             353077 53 +   1103335 TAATGAA--AAGTACAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404121 53 -  44047080 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--GGAGAATTATC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4640 53 +     17875 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001031.1                                 1149 47 -      1297 TAatgaa--aagtatat-aaataagaaT-AC--AGATGTA--------GTAATAAAAGAGA--------
i Pan_paniscus.AJFE02001031.1                            N 0 I 6
s Pan_troglodytes.NBAG03003091.1                             12364 48 -     26668 Taatgaa--aagtatat-aaatatgaataac--aggtgta--------gtaataaa--aaaga------
i Pan_troglodytes.NBAG03003091.1                         I 214 I 6
s Panthera_onca.PanOnc_flattened_line_3271                   24421 53 -    230217 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461747 53 -  18783137 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972406 53 +   8748460 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615648 53 +   2937107 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--GGAGAATTATC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243088 47 - 183742232 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--AGAGA------
i Papio_anubis.CM001495.2                                C 0 I 6
s Papio_cynocephalus.k141_1507553                             9550 47 +     21308 TAATGAA--AAGTATAT-AAATATGGAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Papio_cynocephalus.k141_1507553                        C 0 I 6
s Papio_hamadryas.Contig39                                  292123 47 -  20919399 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Papio_hamadryas.Contig39                               C 0 I 6
s Papio_kindae.k141_2214839                                  22198 47 -     27687 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Papio_kindae.k141_2214839                              C 0 I 6
s Papio_papio.k141_799093                                    15344 53 +     16796 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22155 53 -     23640 TAATGAA--AAGTATAT-AAATATGGAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15012 53 +     78924 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTT--------GTAATAAA--GGAGAATTATC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26273 53 +     31479 TAATGAA--AAGTACAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18643 53 -     24908 TAATGAA--AAGTACAT-AAATATGAAT-AC--AGGTGTA--------GTAATACA--AGAGAATTATC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1728 53 +      9367 TAATGCA--AAGTATAT-AAATATGAGT-AC--AGGTGCA--------GTAATAAA--GGAAAATTATC
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246809 53 +  18517816 TAGCAAA--AAGTGTAG-ACCTAGGAAT-GC--AGGTGAA--------GTAATAAG--GAAGAATTatc
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31885 53 -     56120 TAATGAA--AAGTGTAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12719 53 -     15039 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2368 37 +     55023 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTA------------------
i Piliocolobus_badius.k141_2704958                       C 0 I 16
s Piliocolobus_gordonorum.k141_381342                         1918 35 -     89929 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------G--------------------
i Piliocolobus_gordonorum.k141_381342                    C 0 I 18
s Piliocolobus_kirkii.k141_1310104                            2507 35 +     40849 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------G--------------------
i Piliocolobus_kirkii.k141_1310104                       C 0 I 18
s Piliocolobus_tephrosceles.PDMG02000141.1                  254171 47 +  14605196 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--AGAGA------
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 6
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3701 53 +     22231 TAATGAA--AGGTATCT-AAATATGAAC-AC--AAGGGTA--------GTAATAAA--GGAGAATTATC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64794 51 +    207309 TAATGAG--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAA----GAGAATCTTC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5887 51 -     25401 TAATGAG--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAA----GAGAATCTTC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31630 51 +     58159 TAATGAG--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAA----GAGAATCTTC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31906 51 +     63561 TAATGAG--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAA----GAGAATCTTC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31666 51 +     51148 TAATGAG--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAA----GAGAATCTTC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556636 51 -   4542175 TAATGAG--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAA----GAGAATCTTC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31650 51 +     51125 TAATGAG--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAA----GAGAATCTTC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4808 53 -      8168 TAATGAA--AAGTATCT-AAATATGAAT-AC--AAGTGTA--------GTAATAAA--GGAGAATTATC
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8059 53 +     39866 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATCATC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3143 53 -      9282 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATCATC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42547 53 -     87950 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATCATC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42941 53 -     88961 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATCATC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7639 53 -     39403 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATCATC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42590 53 +     87928 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATCATC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7636 53 -     60166 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGGA--------GTAATAAA--AGAGAATCATC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14573 53 -     67232 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATCATC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42489 53 -     90634 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATCATC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          43956 53 +     89403 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGGA--------GTAATAAA--AGAGAATCATC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   184288 47 - 189387572 TAatgaa--aagtatat-aaatatgaat-ac--agATGTA--------GTAATAAAAGAGA--------
i Pongo_abelii.CM009266.2                                I 6411 T 6416
s Pongo_pygmaeus.ctg66                                      199030 47 -   9816681 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGATGTA--------GTAATAAAAGAGA--------
i Pongo_pygmaeus.ctg66                                   I 6336 T 6341
s Presbytis_comata.k141_1230337                              27493 47 +     69807 TAATGAA--AAGTATGT-AAATATCAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Presbytis_comata.k141_1230337                          C 0 I 6
s Presbytis_mitrata.k141_584736                              44679 47 -     80239 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Presbytis_mitrata.k141_584736                          C 0 I 6
s Procavia_capensis.ProCapCap_scaffold_165387                  109 53 +      7663 TAATGGC--AGGGATCT-AAATATGAAC-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982541 53 +   4620579 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--AGAGAATTATC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566049 53 -   2598838 Taatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--AGAGAATTATC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3687 53 -      7103 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4284 53 -     11706 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8022 53 -     30655 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34335 53 +     46564 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTC--------GTAATAAA--AGAGAATTATC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94614 53 -     98465 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8253 53 +     35169 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37416 53 +     52041 TAGCAAA--AAGTGTAG-AAATATGAAT-GT--GGGTGAA--------GTAATAAG--GAAGAATTATC
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52090 53 -     66298 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGCATCATC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4604 53 -     18639 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840780 53 -  28871421 TAATGAC--AAGTATCT-AAATAGGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537299 53 -   4952924 TAATGAC--AAGTATCT-AAATAGGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099064 53 +  38429054 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26867 47 +     91421 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Pygathrix_cinerea.k141_1153803                         C 0 I 6
s Pygathrix_nigripes_b.ctg100                                  153359 47 -   7812017 TAATGAA--AAGTATAT-AAATATGAAT-AC--GGGTGTA--------GTAATAAA--AGAGA------
i Pygathrix_nigripes_b.ctg100                               C 0 I 6
s Pygathrix_nigripes_a.k141_215492                              7734 47 +     72585 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Pygathrix_nigripes_a.k141_215492                         C 0 I 6
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53136 53 +     55069 TAATGAA--AAGTATAT-AAATATGAAT-AT--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022700 53 -  90668790 TAGCAAA--AGGTGTAA-AAATATGAAT-GC--AGGTGAA--------GCAATAAG--GAAGAATTATC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914677 53 +   3329780 taatgaa--aaatatct-aaatatgaaT-AC--AGGTATA--------GTAATAAT--GGAGAATTATC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             1440 47 +      7119 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Rhinopithecus_bieti.k119_778604                        C 0 I 6
s Rhinopithecus_roxellana.NC_044550.1                    104122048 47 + 195417433 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--AGAGA------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 6
s Rhinopithecus_strykeri.ctg102                             236290 47 -   7961872 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Rhinopithecus_strykeri.ctg102                          C 0 I 6
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74713 53 -    116970 TAATGAC--AAGTATCT-AAATAGGAAT-AC--AGGTGTA--------GTAATAAA--GAAGAATTATC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               3948 53 +     27962 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--AGAGAATTATC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3843 53 +      6077 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--AGAGAATTATC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3933 53 +      5971 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--AGAGAATTATC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3854 53 +      5932 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--AGAGAATTATC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2196 53 -      4390 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--AGAGAATTATC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391633 53 - 209938924 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--AGAGAATGATC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3803 53 +      5979 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--AGAGAATTATC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                372 53 -     22275 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--AGAGAATTATC
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7809 53 +     16473 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1108970 53 + 121099817 TAatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--AGAGAATTATC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30537 53 -     47369 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGATAATTATC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30923 53 -     79414 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27614 53 -     34454 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15015 53 -     22428 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30169 53 -     47109 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGATAATTATC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238223 53 +   5703754 TAATGAA--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7813 53 +     21866 TAATGAA--AAGTATAT-ACATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115851 53 +    313613 TAGTGAA--AAGTATCT-AAATATGAAT-AC--AGGTGGA--------GTAATAAA--GGAAAATTATC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25186 53 +     27374 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28700 47 +     58920 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Semnopithecus_hypoleucos.k141_1910531                  C 0 I 6
s Semnopithecus_johnii.k141_843753                           15196 47 -     45317 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Semnopithecus_johnii.k141_843753                       C 0 I 6
s Semnopithecus_priam.k141_714795                            22855 47 -     42441 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Semnopithecus_priam.k141_714795                        C 0 I 6
s Semnopithecus_schistaceus.k141_1432920                     25533 53 -     29113 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28607 47 -     48123 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Semnopithecus_vetulus.k141_244474                      C 0 I 6
s Sigmodon_hispidus.SigHis_scaffold_20193                    49186 53 +     77746 TAGCAAA--AAGTGTAG-AAATATGAAT-GC--AGGTGAA--------GTAATAAG--GAAGAATTATC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864135 53 -   1910179 TAATGAA--AAGTATCT-AAATATAAAC-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671286 53 +  18376816 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGtgta--------ataataaa--ggaaaattatc
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868323 53 +   3870691 Taatgaa--aagtatat-aaatatgaat-ac--agGTGTA--------GTAATAAA--GGAGAATTATC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6674 53 -     97271 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124834 53 +    196729 TAATGAA--AAATATCT-AAATATGAAT-AC--AGGTGCA--------GTAATAAA--GGAGAATTATC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643724 53 +  69701581 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTa--------gtaataaa--ggaaaattatc
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       395914 47 +   1523678 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGATGTA--------GTAATAAAAGAGA--------
i Symphalangus_syndactylus.tarseq_199                    I 4789 T 4783
s Tadarida_brasiliensis.TadBra_scaffold_54991                14265 53 +     22964 TAATGAA--AGGTATCT-AAATATGAAT-AC--AGGTGTA--------CTAATAAA--GGAGAATGATC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2661 53 +      5583 TAATGAA--AAGTGTCT-AAATATGAAC-AC--AGGTGTG--------GTAATGAA--CGAGAATTATC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191568 53 +    199430 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105538 53 -    539355 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 586 53 +      9917 TAGTGAA--AAGTATAT-AAATATGAAT-AC--AGGTATA--------GTAATAAA--GAAGAATTATC
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7376 53 +     20590 TAGTGAA--AAGTATAT-AAATATGAAT-AC--AGGTATA--------GTAATAAA--AAAGAATTATC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353074 47 - 186847797 TAatgaa--aagtatat-aaatatggaT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Theropithecus_gelada.CM009954.1                        C 0 I 6
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24041 53 -     33621 TAATGAA--AAGTGTAT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--GGAGAATTATC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19759 53 -     31044 TCAGGAG--AAGTACCT-AAATAGGAAC-AC--AGGTGTA--------CTAATAAG--TGAGAATTATC
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480086 53 -    610378 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20732 47 +     26378 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Trachypithecus_auratus.k141_1189070                    C 0 I 6
s Trachypithecus_crepusculus.k141_539312                     33410 47 -     78344 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Trachypithecus_crepusculus.k141_539312                 C 0 I 6
s Trachypithecus_cristatus.k141_180416                       20057 47 +     25722 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Trachypithecus_cristatus.k141_180416                   C 0 I 6
s Trachypithecus_francoisi.k141_1453105                      28363 47 -     62838 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Trachypithecus_francoisi.k141_1453105                  C 0 I 6
s Trachypithecus_geei.k141_1001272                           28408 47 +     46913 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Trachypithecus_geei.k141_1001272                       C 0 I 6
s Trachypithecus_germaini.k141_57262                          9215 47 -     28527 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Trachypithecus_germaini.k141_57262                     C 0 I 6
s Trachypithecus_hatinhensis.k141_31479                      30299 47 -     64340 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 6
s Trachypithecus_laotum.k141_928651                          28336 47 -     63452 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Trachypithecus_laotum.k141_928651                      C 0 I 6
s Trachypithecus_leucocephalus.k141_96450                     9782 47 +     22490 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Trachypithecus_leucocephalus.k141_96450                C 0 I 6
s Trachypithecus_melamera.k141_591572                         3207 53 -      6147 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10112 53 -     13050 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255352 47 -   6242583 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Trachypithecus_phayrei.ctg124                          C 0 I 6
s Trachypithecus_pileatus.k141_2622778                        1376 47 +     19340 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGA------
i Trachypithecus_pileatus.k141_2622778                   C 0 I 6
s Tragulus_javanicus.TraJav_scaffold_3462                   173421 53 -    200418 TAACGAA--AAGTATCT-AAATATGAAT-AC--AGGTATA--------ATAATAAA--GGAAAATTATC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480399 53 -  10818551 TAATGGA--AAGTATCT-AAATATGAAC-AC--AGGTGTA--------ATAATGAA--GGCGAATTATC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834070 53 -   4065304 TAAtgaa--aactatat-aaatatgaat-ac--agGTGTA--------GTAATAGA--GGCCCATTATC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8091 53 -     70247 TAATGAA--AACTATAT-AAATATGAAT-AC--AGGTGTA--------GCAATAAA--GGCCCATTATC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361620 53 -  33153633 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3591 53 -     21056 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181779 53 +   5085361 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25190 53 -     30710 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24097 53 -    147434 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--AGAGAATTATC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76256 53 +   5488506 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAT--GGAGAATTATC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104913 53 -    112863 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174110 53 -    224448 TAATGAA--AAGTATAT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28809 53 -     86975 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                       582 52 -       833 TAATGAA--CAGCGTAT-AAATATGAAT-GC--AGGTGAA--------GTA-TAAG--GAAGAATTATC
i Zapus_hudsonius.ZapHud_scaffold_501999                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595            1027 53 +      1812 TAATGAA--AAGTATCT-AAATATGAAT-AC--AGGTGTA--------GTAATAAA--GGAGAATTATC
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5466 66 +     36723 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
s Acinonyx_jubatus.LLWD01001279.1                           812859 66 +   1699592 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25134 66 +     63021 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATGGGATTGT-CA-CCT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415318 66 +  29979442 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215627 66 +    347723 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18077 66 -     61208 AGTCACCCTTAATTTAATT-AGTGT-CACCTTAGCCTTTTGTAG-GG--TA---A-TA---GG----ACTGTATTGC-CA-CAT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47782 64 +     53615 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Allenopithecus_nigroviridis.k141_3755588               I 6 I 13
s Allochrocebus_lhoesti.k141_441277                          43764 66 +     44087 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16372 64 -     21945 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Allochrocebus_preussi.k141_1993939                     I 6 I 13
s Allochrocebus_solatus.k141_3554717                         18055 64 +     32033 AGTCGCCCTTAATTTAATT-GGTGT-CATCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Allochrocebus_solatus.k141_3554717                     I 6 I 13
s Alouatta_belzebul.k141_1011583                             72219 65 -     84148 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TG---A--A---GG----AGAGTATTGC-CA-CCT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44458 65 -     78289 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TG---A--A---GG----AGAGTATTGC-CA-CCT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43897 65 +     55831 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TG---A--A---GG----AGAGTATTGC-CA-CCT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42347 65 -     64179 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TG---A--A---GG----AGAGTATTGC-CA-CCT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           23981 65 -     24835 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TG---A--A---GG----AGAGTATTGC-CA-CCT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             40972 65 +     45454 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TG---A--A---GG----AGAGTATTGC-CA-CCT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46621 65 +     70886 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TG---A--A---GG----AGAGTATTGC-CA-CCT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8794 65 +     30854 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TG---A--A---GG----AGAGTATTGC-CA-CCT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32928 65 +     42133 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TG---A--A---GG----AGAGTATTGC-CA-CCT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585307 66 +   2318259 CGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGTAG-GG--TA---A-TA---GG----GTAGTAATGC-CA-CCC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177097 66 -    412891 AGTCACCCTCACTTTAATT-GGTGT-CACCTTAGCTTTTAGTAA-GG--TA---A-TA---GG----ACAGTGCTGC-CA-CCT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50414 66 -     68529 GGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1174 66 +     17741 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1799 66 -     15923 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672081 66 +   5030052 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2075 66 -     16391 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1634 66 -     17186 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      15996 66 -     32367 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATACTATTGC-CA-CCT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19531 66 -     45910 CATAGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GCAGTGTTGC-CA-TCT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5375 63 -     15198 AGTCACCCTCACTTTAATT-GGTGT-CACCTTATCTTTT---AA-GG--TA---A-TA---GG----ATGGTACTGC-CA-CCT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274673 65 +  21539123 AGTCACCCTGAATTTAACT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A--A---GG----AGAGTATTAC-CA-CCT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10839 65 +     48076 AGTCACCCTGAATTTAACT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A--A---GG----AGAGTATTAC-CA-CCT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   5976 65 -     28759 AGTCACCCTGAATTTAACT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A--A---GG----AGAGTATTAC-CA-CCT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33530 65 +     44353 AGTCACCCTGAATTTAACT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A--A---GG----AGAGTATTAC-CA-CCT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48899 65 -     71267 AGTCACCCTGAATTTAACT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A--A---GG----AGAGTATTAC-CA-CCT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                22959 65 -     33135 AGTCACCCTGAATTTAACT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A--A---GG----AGAGTATTAC-CA-CCT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6205 66 +     11645 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TAA--GG----CTAGCATTGC-CA-CCT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6213 66 -     19611 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TAA--GG----CTAGCATTGC-CA-CCT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7957196 66 -  23207421 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF507193.1                         4405 66 -      4711 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Balaenoptera_bonaerensis.DF507193.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86315 66 +    124022 AGTCACCCTTAATTTAATT-GGTAT-CACCTTAGCCTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21848 66 +    288883 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGAATTGC-CA-CCG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356241 66 +  48749331 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGAATTGC-CA-CCG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754804 66 +   1948126 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGAATTGC-CA-CCG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27544947 66 -  45695690 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGAATTGC-CA-CCG
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1529967 66 -   4408762 AGTCACCCTTAGTCTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGAATTGC-CA-CCC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7847 66 +     28062 AGTCGCCCTGAATTTAATT-GGTGT-CACCTTAGCTTTCAGAAG-GG--CA---A-TA---AG----AGAGTATTGA-CA-CCT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43141 66 -     91139 AGTCGCCCTGAATTTAATT-GGTGT-CACCTTAGCTTTCAGAAG-GG--CA---A-TA---AG----AGAGTATTGA-CA-CCT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20667 66 +     95584 AGTCGCCCTGAATTTAATT-GGTGT-CACCTTAGCTTTCAGAAG-GG--CA---A-TA---AG----AGAGTATTGA-CA-CCT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20580 66 +    119600 AGTCACCCTGAATTTAATT-GGTGT-CACCTTAGCTTTCAGAAG-GG--CA---A-TA---AG----AGAGTATTGA-CA-CCT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10154 66 +     18648 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-AA---GG----AGAGTATTGC-CA-CCT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9689 66 -     13885 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TT---A-TA---GG----AGAGTATTGC-CA-CCT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1759 66 -      8861 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-AA---GG----AGAGTATTGC-CA-CCT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454152 65 + 189096842 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-AA---G-----AGAGTATTGC-CA-CCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1675 65 +      8664 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-AA---G-----AGAGTATTGC-CA-CCT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7630975 66 +  17673402 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAATAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CTT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665261 66 +   7040546 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAATAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CTT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1208921 66 +   1652518 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAATAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CTT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505335 66 +  60362399 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     8971 66 -     23171 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222314 66 +   9314153 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615449 66 +  59632846 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107030 66 -  63665305 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409036 66 -  46296322 CGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591310 66 +  44709034 CGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1523 65 -      1880 TCTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG---A---A-TA---GC----ATTGTATTGC-CA-CCT
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270412 66 +    496798 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGCATTGC-CA-CTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                213 66 +      9923 AGTCACCCTCACTTTAATT-GGTGT-CACCTTAGCTTTTAGTAA-GG--TA---A-TA---GG----ATGGTACTGC-CA-CCT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27656 66 -     39886 AGTCATCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATGGTATCGC-CA-CCT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79511 66 -    217609 AGTCACCCTTAGTTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----CTTGTATTGC-CA-CCT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996370 66 +  23392119 TCTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--CA---A-TA---GC----ATAGTGTTGT-CA-CCT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999812 66 +  23407841 TCTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--CA---A-TA---GC----ATAGTGTTGT-CA-CCT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62893 66 -     66877 TCTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--CA---A-TA---GC----ATAGTGTTGT-CA-CCT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5072 66 -     12580 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-AA---GG----AGAGTATTGC-CA-CCT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43130 66 +     53515 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-AA---GG----AGAGTATTGC-CA-CCT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371060 66 -  26074798 AGTCACCCTCAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGACTGTTGC-CA-CCT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                7949 66 -     34880 AGTCACCCTCAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGACTGTTGC-CA-CCT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67044 66 -     89041 AGTCACCCTCAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGACTGTTGC-CA-CCT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2376 66 -      5494 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGCATTGC-CA-CTT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492146 66 -  27778364 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----CTAGTATTGC-CA-CCT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          18979 66 +     27315 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----CTAGTATTGC-CA-CCT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                140959 64 -   4669795 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Cercocebus_atys.KQ010504.1                             I 6 I 13
s Cercocebus_chrysogaster.k141_1522556                       44701 66 +     47900 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44525 66 -     44860 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44514 64 -    148725 AGTTGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Cercocebus_torquatus.k141_2159127                      I 6 I 13
s Cercopithecus_ascanius.k141_3120866                        26701 64 -     40656 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Cercopithecus_ascanius.k141_3120866                    I 6 I 13
s Cercopithecus_cephus.k141_4183004                           6667 64 +     20796 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Cercopithecus_cephus.k141_4183004                      I 6 I 13
s Cercopithecus_diana.k141_132293                            11784 64 -     17524 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Cercopithecus_diana.k141_132293                        I 6 I 13
s Cercopithecus_hamlyni.k141_566925                          27506 64 -     34525 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Cercopithecus_hamlyni.k141_566925                      I 6 I 13
s Cercopithecus_lowei.k141_2101310                           11288 64 -     25376 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Cercopithecus_lowei.k141_2101310                       I 6 I 13
s Cercopithecus_albogularis.ctg5                                  363883 64 -  39242232 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Cercopithecus_albogularis.ctg5                               I 6 I 13
s Cercopithecus_mona.ctg39                                  269600 64 +  21565898 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Cercopithecus_mona.ctg39                               I 6 I 13
s Cercopithecus_neglectus.k141_858615                        31973 64 -     45857 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Cercopithecus_neglectus.k141_858615                    I 6 I 13
s Cercopithecus_nictitans.k141_2995370                       26872 64 -     32606 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Cercopithecus_nictitans.k141_2995370                   I 6 I 13
s Cercopithecus_petaurista.k141_42573                         3031 64 +      8499 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Cercopithecus_petaurista.k141_42573                    I 6 I 13
s Cercopithecus_pogonias.k141_6079                           25428 64 +     70610 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Cercopithecus_pogonias.k141_6079                       I 6 I 13
s Cercopithecus_roloway.k141_3012935                         22398 64 +     36323 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Cercopithecus_roloway.k141_3012935                     I 6 I 13
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12723 64 -     19938 AGTCCC--TCAGTTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---GG----ATGGCACTGC-CA-CCT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30581 65 -     33796 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----CTAGCATTGC-CA-CCT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5098 65 -     15404 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----CTAGCATTGC-CA-CCT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             8947 66 -     32913 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19360 66 -     40346 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19615 66 +    216457 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19408 66 +     39636 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238747 66 -   2543920 TCTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--CA---A-TA---GC----ATAGTATTGC-CA-CCT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4003 66 +      5346 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTTTTGC-CA-CCT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42478 66 -    112038 AGTCGCCCTGAATTTAATT-GGTGT-CACCTTAGCTTTCAGAAG-GG--CA---A-TA---GG----AGAGTATTGA-CA-CCT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8049 66 +     34062 AGTCGCCCTGAATTTAATT-GGTGT-CACCTTAGCTTTCAGAAG-GG--CA---A-TA---GG----AGAGTATTGA-CA-CCT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343289 64 +  18827391 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Chlorocebus_aethiops.ctg25                             I 6 I 13
s Chlorocebus_pygerythrus.k141_3063162                        9836 64 -     44032 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Chlorocebus_pygerythrus.k141_3063162                   I 6 I 13
s Chlorocebus_sabaeus.CM001947.1                            304613 64 - 135778131 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Chlorocebus_sabaeus.CM001947.1                         I 6 I 13
s Choloepus_didactylus.ChoDid_scaffold_70559                 14763 64 +     15858 AGTCAC--TCAATTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606338 64 -    839153 AGTCAC--TCAATTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                756 68 +      2406 AGTCACCCTTTATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GTTTTA---A-GA---GG----TTGGGATTCC-TA-CCT
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409038 64 -   2368649 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Colobus_angolensis.KN981557.1                          I 6 I 13
s Colobus_guereza.LG01                                      378914 64 - 200372422 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Colobus_guereza.LG01                                   I 6 I 13
s Colobus_polykomos.k141_906115                               2463 64 -     84244 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Colobus_polykomos.k141_906115                          I 6 I 13
s Condylura_cristata.JH655891.1                           35807214 66 +  53390261 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAA-GG--TA---A-TA---GA----ATAGTATTGC-CA-CCT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2727 66 -      8242 AGTCACCCTTACTTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 8 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44275 66 -     83289 AGTCAACCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATGGGATTGC-CA-CCT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114839 66 - 224834208 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---GG----CTGGGATTGC-CA-CCT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9424 66 +     12657 AGTCACCCTTATTTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--CA---A-TA---GG----ATAGCTTTAC-CA-CCT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4304 66 +     87169 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    644970 66 -   1526836 AGTCACTCTTCTTTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---GC----CAAGTATTGC-CA-ACT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18314 66 +     50838 TCTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG---G---ACTA---GC----ACAGTATTGC-CA-CCT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4293 66 +     36344 TCTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--CA---A-TA---GC----ATAGTATTGT-CA-CCT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28069 66 +     75252 TCTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--CA---A-TA---GC----ATAGTATTGT-CA-CCT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110073 64 -   2246927 AGTCCC--TGGATTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292519 65 +  12879189 ATTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----ATGGCACTGC-CA-CCT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625733 66 -  35494412 AGTCACCCTTAATTAAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330413 66 -   2620052 AGTCACCCTTACTTTAATT-CCTGT-CACCTTTGCTTTTAGTAA-GG--TA---A-TT---GG----ATGGTAGTGC-CA-CCT
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664428 66 -   1390856 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CTT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139223 66 -    198055 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--CA---A-TA---GG----CTAGTATTGC-CA-CCT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98833 66 -    115145 TCGCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--CA---A-TA---GC----ATAGTACTGC-CA-CCT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950452 67 -  37912305 TGTCACCCTTAATTTAACT-GGTGT-CACCTTTGCTTTTAGTAGGGG--TA---A-TA---GG----ATGGCATTGC-CA-CCT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5390 67 -     10735 TGTCACCCTTAATTTAACT-GGTGT-CACCTTTGCTTTTAGTAGGGG--TA---A-TA---GG----ATGGCATTGC-CA-CCT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10329 66 +     14636 TCTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--CA---A-TA---GC----ATAGTATTGT-CA-CTT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62855028 68 - 111700974 AGTCACCATTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCGG-GTTTTA---A-GA---GG----ATGGTATTGC-CA-CCT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6185 66 +     19438 AGTCACCCTTACTTTAATT-GGTGT-CACCTTAGCTTTTAGTCG-GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239676 66 -    607251 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108697 68 -  10337057 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAATAG-GGTTTA---A-TG---GT----ATGGTATTGC-CA-CCT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          30987 66 +    110024 AGTCACCGTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATGGGATTGC-CA-CCT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           12958 66 +     18970 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAATAG-GG--TA---A-TA---GG----ACAGGATTGC-CA-CCT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916056 66 +  41312741 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-TCT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578847 66 +  14770903 AGTCACCCTTACTTTAATG-GGTGT-CACCTTGCCTTTTAGTAA-GG--TA---A-TA---GG----ACAGTACTGT-CA-CCT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041307 66 -   4378816 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---CG----ATAGTACTGC-CA-CCT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375245 66 +  39960074 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---CG----ATAGTACTGC-CA-CCT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             626 66 -      1194 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---CG----ATAGTACTGC-CA-CCT
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666010 66 +   7059049 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATACTATTGC-CA-CCT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262816 64 +  21539334 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Erythrocebus_patas.Contig38                            I 6 I 13
s Eschrichtius_robustus.EscRob_flattened_line_8968           65072 66 -    133382 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_118172             5291 66 +      7672 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 C 0
s Eulemur_albifrons.k141_51491                               14728 65 -     24895 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--CA---A-TA---GG----ATAGCATTGC-CA-CCT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42437 65 -     70999 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--CA---A-TA---GG----ATAGCATTGC-CA-CCT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86399 65 +    112731 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--CA---A-TA---GG----ATAGCATTGC-CA-CCT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             42968 65 +     68309 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--CA---A-TA---GG----ATAGCATTGC-CA-CCT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53294 65 -     65740 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--CA---A-TA---GG----ATAGCATTGC-CA-CCT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                23923 65 -     75513 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--CA---A-TA---GG----ATAGCATTGC-CA-CCT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48121 65 -     97555 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--CA---A-TA---GG----ATAGCATTGC-CA-CCT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4845 65 +     30972 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--CA---A-TA---GG----ATAGCATTGC-CA-CCT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42565 65 -     52037 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--CA---A-TA---GG----ATAGCATTGC-CA-CCT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              58967 65 -    111500 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--CA---A-TA---GG----ATAGCATTGC-CA-CCT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246768 66 - 206538554 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116554 66 - 205367284 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27651 66 -     30238 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916370 66 -   3816255 TGTCACCCTTTATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--CG---A-TA---GC----ATAATATTGC-CA-CCT
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     124966 66 -    137831 CCTAGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ACAGTGTTGC-CA-CCT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8511 66 +     22493 CCTAGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ACAGTGTTGC-CA-CCT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20583 66 -     32986 CCTAGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ACAGTGTTGC-CA-CCT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1123 66 -     28519 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAACTTTAAGTAG-GG--TA---A-AA---GG----ATAGTACTGC-CA-CCT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91379 66 -     95226 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34448 66 -     36801 AGCCACCCTTAACTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----CCAGTATTGC-CA-CCT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5766 66 -      8343 AGTCACCCTTAATTTAATT-GCTGT-CACCTTAGCCTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254781 44 - 186649187 agTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGAAG-GG-------------------------------------
i Gorilla_gorilla.LT578341.1                             I 6 I 33
s Graphiurus_murinus.GraMur_scaffold_10447                    1943 66 -     78134 AGTCACCCTTAACTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----CTAGCATTGC-CA-CTT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14653 65 -     40692 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36055 65 +     49394 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              60923 65 -     66874 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9797 65 -     42923 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16797 65 -     53142 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30734 66 -    327341 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CTT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9054 66 +     48891 CATCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932339 66 -  22651954 TGTCACCCTTAATTTAATT-AGTTT-CACCTTAGCTTTTAGTAG-GC--CA---A-TA---GC----ATAATATTGC-CA-CCT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                 389 66 +      4291 GGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTGGTTTTGT-CA-CCT
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7578 66 -     36432 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GA--TA---A-TA---GG----ATAGTATTGC-CA-CTT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1017 66 -      2730 AGTCACCCTTTCTTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---AG----ATAGTATTGCCC--CCT
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142790 64 -    630532 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGAAG-GG--TA---A-TA---GG----ATAGTCTTGC-CA-C--
i Hoolock_leuconedys.ctg274                                 T 4809 I 13
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69650 66 +     83186 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71806 66 +    143317 TCTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--CA---A-TA---GC----ACAGTATTGT-CA-CCT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5824 64 +     12352 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGAAG-GG--TA---A-TA---GG----ACAGTATTGC-CA-C--
i Hylobates_agilis.k141_1155965                          T 4828 I 13
s Hylobates_klossii.k141_738755                              13008 64 +     55766 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGAAG-GG--TA---A-TA---GG----ACAGTATTGC-CA-C--
i Hylobates_klossii.k141_738755                          I 6 I 13
s Hylobates_pileatus_b.LG02                                       2052608 64 + 191637585 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGAAG-GG--TA---A-TA---GG----ACAGTATTGC-CA-C--
i Hylobates_pileatus_b.LG02                                     I 6 I 13
s Hylobates_pileatus_a.tarseq_633                            7801486 64 +  11177569 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGAAG-GG--TA---A-TA---GG----ACAGTATTGC-CA-C--
i Hylobates_pileatus_a.tarseq_633                          I 6 I 13
s Hystrix_cristata.HysCri_scaffold_5660                       4444 66 -    135385 TGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GC----ATAGTATTGC-CA-CTT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386797 66 +   7955117 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---GC----CTAGTATTGC-CA-CCT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2353 65 +     11955 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----CTAGCATCGC-CA-CCT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                3550 66 -     16823 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1239783 65 +   9596543 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAG-TTTTAGTAG-GG--CA---A-TA---GG----ACTTTCTTGC-CA-CCT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65791 65 -     97402 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TG---A-T----GG----GTAGTATTGC-CA-CCT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43224 65 +    110728 AGTCACCCTGAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A--A---GG----AGAGTATTGC-CA-CCT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62842 66 -     65777 AGTCACCCTTCCTTTAATT-GGTGT-CACCTTGGCTGTGAGTAA-GG--GA---A-TA---GG----AGAGCACTGT-CA-CCT
i Lasiurus_borealis.LasBor_scaffold_16567                I 53 C 0
s Lemur_catta.scaffold_24                                 14759446 65 +  30322482 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4138 66 -     13097 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3892 66 +      5940 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3722 66 -      5717 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10097 63 -     11567 GGTCACCCTTAGTTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---G-------AGTATTGC-CA-CCT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11478 63 -     12945 GGTCACCCTTAGTTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---G-------AGTATTGC-CA-CCT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          8957 65 +     29618 AGTCACCCTTAATTTAATT-GGTGT-CACCTTTGCTTTTAGTA--GG--TA---A-TA---GA----CTAGCATTGC-CA-CCT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              8953 65 +     31569 AGTCACCCTTAATTTAATT-GGTGT-CACCTTTGCTTTTAGTA--GG--TA---A-TA---GA----CTAGCATTGC-CA-CCT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          8963 65 +     24756 AGTCACCCTTAATTTAATT-GGTGT-CACCTTTGCTTTTAGTA--GG--TA---A-TA---GA----CTAGCATTGC-CA-CCT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       8963 65 +     16388 AGTCACCCTTAATTTAATT-GGTGT-CACCTTTGCTTTTAGTA--GG--TA---A-TA---GA----CTAGCATTGC-CA-CCT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813465 48 -   3914936 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-T---------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 13
s Lepus_americanus.LepAme_scaffold_56121                     17823 70 +     24238 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GGATAGCTAGTATTGC-CA-CCT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             335078 66 +    662738 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333844 64 -   1826925 AGTCTCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Lophocebus_aterrimus.ctg367                            I 6 I 13
s Loris_lydekkerianus.k141_2031736                           10542 66 +     19643 TGTAGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---AG----ACAGTGTTGC-CA-CCT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5044205 66 -   6120653 TGTAGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---AG----ACAGTGTTGC-CA-CCT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39080985 66 +  43346337 CATCACCTTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATGGTATTGC-CA-CCT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614604 66 +  59628241 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45238 64 -     61512 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Macaca_arctoides.k141_1757516                          I 6 I 13
s Macaca_assamensis.Contig5                                 372900 64 -  60120075 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Macaca_assamensis.Contig5                              I 6 I 13
s Macaca_cyclopis.k119_263443                                25163 64 +     30207 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Macaca_cyclopis.k119_263443                            I 6 I 13
s Macaca_fascicularis.k141_1397292                           22266 66 -     24934 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25116 64 +     30527 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Macaca_fuscata.k119_546792                             I 6 I 13
s Macaca_leonina.k141_321385                                 36292 64 -     50087 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Macaca_leonina.k141_321385                             I 6 I 13
s Macaca_maura.k141_1103459                                  46036 64 +     51645 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAATTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Macaca_maura.k141_1103459                              I 6 I 13
s Macaca_mulatta.NC_041758.1                                415238 64 - 187317192 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Macaca_mulatta.NC_041758.1                             I 6 I 13
s Macaca_nemestrina.KQ007038.1                              399469 64 +  25927173 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Macaca_nemestrina.KQ007038.1                           I 6 I 13
s Macaca_nigra.k141_2818840                                  48641 64 -     62418 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Macaca_nigra.k141_2818840                              I 6 I 13
s Macaca_radiata.k141_2139468                                 1177 64 +     14901 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Macaca_radiata.k141_2139468                            I 6 I 13
s Macaca_siberu.k141_2185972                                 45113 64 +     59329 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Macaca_siberu.k141_2185972                             I 6 I 13
s Macaca_silenus.Contig273                                  271021 64 +    668171 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Macaca_silenus.Contig273                               I 6 I 13
s Macaca_thibetana.k99_503078                                 1297 66 +      1732 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2819 64 +     17132 AGTCGCCCTTAATTTAATT-GGTGT-CACTTTAATTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Macaca_tonkeana.k141_339739                            I 6 I 13
s Macroglossus_sobrinus.MacSob_scaffold_4024                223149 66 -    270270 AGTCACCCTTACTTTAATT-GGTGT-CACCTTAGCTTTTAGTCA-GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322308 64 +  24302211 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Mandrillus_leucophaeus.scaffold280                     I 6 I 13
s Mandrillus_sphinx.Contig270                               357139 64 -    752769 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Mandrillus_sphinx.Contig270                            I 6 I 13
s Manis_javanica.JSZB01003497.1                             673498 66 -    737560 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTCTTGC-CA-CCT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220797 66 +    317179 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTCTTGC-CA-CCT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501017 66 +  40650429 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---GG----CTAGTATTGC-CA-CCT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150335 66 +    207569 ATTCACCCTTATTTTAATT-GGTGT-CACCTTAGCTTTTAATAG-GG--TA---A-TA---CG----ATAGTATTAC-CA-CCT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 8 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26153 66 -     74585 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50126 66 -    140813 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATGGGATTGC-CA-CCT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429225 66 +  29670104 AGTCACCCCTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TG---GG----ATGGGATTGC-CA-CCT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     81377 66 +     93471 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10261 66 +     17804 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-AA---GG----AGAGTATTGC-CA-CCT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10761 66 -     12984 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-AA---GG----AGAGTATTGC-CA-CCT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19077 66 -     26561 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-AA---GG----AGAGTATTGC-CA-CCT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984565 65 +  93316391 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----CTAGCATTGC-CA-CCT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46113 68 +    145209 AGTTACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTGC-GTTTTA---A-GA---GG----ATGGTATCGC-CA-CCT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185026 66 +    200668 AGTCACCCTCACTTTAATT-GGTGT-CACCTTAGCTTTTAGTAA-GG--TA---A-TA---GG----ATGGTACTGC-CA-CCT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962426 66 +  27267610 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAA-GG--TA---A-TA---GG----ACAGGATTAC-CA-CCT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363196 65 -   8254450 AGTCACCCTTACTTTAATT-GGTGT-CACCTTAGCTTTTAGTAA-GG--T----A-TA---GG----ACAGTACTGC-CA-CCT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42103 65 -     48117 AGTCACCCTTACTTTAATT-GGTGT-CACCTTAGCTTTTAGTAA-GG--T----A-TA---GG----ACAGTACTGC-CA-CCT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22325 64 -     27822 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGATG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Miopithecus_ogouensis.k141_1534655                     I 6 I 13
s Mirounga_angustirostris.MirAng_flattened_line_54046         8476 48 +     27589 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-T---------------------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 13
s Mirza_zaza.k141_766280                                     52361 65 -     62432 AGTCACCCTTAATTTAATT-GGGGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----CTAGCATTGC-CA-CCT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   353476 66 +    437263 AGTCACCCTTAATTAAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179249 66 +    366855 AGTCGCCCTTACTTTAATT-GGTGT-CACCTTAGCTTTTAGTAA-GG--TA---A-TA---GA----ATGGTATTGC-CA-CCT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25500 66 -     82753 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18485 66 -     63510 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CTT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39161 66 +     47283 AGTCACCCTTGCTTTAATT-GGTGT-CACCTTGGCTTTTAGTGA-GG--TA---A-TA---GG----TTAGTCCTCC-CA-TCT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593148 65 + 120012414 AGTCACCC-TAATTTAATT-AGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATGGGATTGC-CA-CCT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687534 65 + 129401213 AGTCACCC-TAATTTAATT-AGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATGGGATTGC-CA-CCT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39496826 65 + 130317789 AGTCACCC-TAATTTAATT-AGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATGGGATTGC-CA-CCT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83274 66 -     86153 AGTCACCCTTAACTTAATT-GGTGT-CACCTTTGCTTTTAGTAG-GG--TA---A-TA---GG----CTAGCATTGC-CA-CCT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355090 66 +  14710649 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63102 65 +     67721 TCTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAT-GG---C---A-TA---GC----AGAGTATCGC-CA-CCT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793450 66 +  10118263 AGTCACCCTTACTTTAATT-GGTGT-CACCTTGGCTTTTAGTAA-GG--TA---A-TA---GG----ATAGTACTGC-CA-CCT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387580 66 +   6019432 AGTCACCCTTACTTTAATT-GGTGT-CACCTTGGCTTTTAGTAA-GG--TA---A-TA---GG----ATAGCACTGC-CA-CCT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383407 66 +   4330536 AGTCACCCTTACTTTAATT-GGTGT-CACCTTGGCTTTTAGTAA-GG--TA---A-TA---GG----ATAGTACTGC-CA-CCT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2216 66 +     18357 AGTCACCCTTACTTTAATT-GGTGT-CACCTTGGCTTTTAGTAA-GG--TA---A-TA---GG----ATAGTACTGC-CA-CCT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119725 64 +    130748 AGTCAC--TCAATTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946261 66 +   3037898 AGTCACCCCTAACTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GT--TA---A-TA---GG----ATGGTATTGC-CA-TCT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              28963 64 +     34575 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---AG----ATAGTATTGC-CA-C--
i Nasalis_larvatus.k141_1350636                          I 6 I 13
s Neophocaena_asiaeorientalis.KZ687982.1                   1227646 66 -   7148211 AGTCACCCTTAATTAAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128189 66 -    149072 AGTCGCCCTTACTTTAATT-GGTGT-CACCTTAGCTTTTGGTAA-GG--TA---A-TA---GG----ACAGTCCTGC-CA-CCT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53716 64 -    132029 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Nomascus_annamensis.k141_1771965                       I 6 I 13
s Nomascus_concolor.k141_735679                               9811 64 -     16345 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Nomascus_concolor.k141_735679                          I 6 I 13
s Nomascus_gabriellae.k141_57920                             15696 64 +     22201 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Nomascus_gabriellae.k141_57920                         I 6 I 13
s Nomascus_siki_b.tarseq_93                            8413917 64 -  22158432 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Nomascus_siki_b.tarseq_93                          I 6 I 13
s Nomascus_siki_a.k141_941534                                  26094 64 -     54323 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Nomascus_siki_a.k141_941534                              I 6 I 13
s Nyctereutes_procyonoides.CAJHUB010000658.1                198198 66 +   9404916 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636567 66 + 196305487 TGTAGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GC--TA---A-TA---AG----ACAGTGTTGC-CA-CCT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3321 66 -      3937 TGTAGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GC--TA---A-TA---AG----ACAGTGTTGC-CA-CCT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564826 66 - 199412804 TGTAGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GC--TA---A-TA---AG----ACAGTGTTGC-CA-CCT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2556780 13 -   3988456 ATTCACATATAAT-----------------------------------------------------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 235
s Octodon_degus.JH651603.1                                11055051 65 -  11899542 TCTCACCCTTAATTTAATT-GGTGT-CACCTTAACTTTTAGTAG-GG---A---A-TT---GC----ATAGTATTGC-CA-CCT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451667 66 +   2017862 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436271 66 -    630418 AGTCATCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAATAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14262 66 +    150152 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92782 66 -    140218 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATGGGATTGC-CA-CCT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3665 66 -     41509 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATGGGATTGC-CA-CCT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096928 66 +  10937097 AGTCACCCTTAATTAAGTT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13790 68 -     14239 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GTTTTA---A-TA---GG----ATGGTATTGC-CA-CTT
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103616 70 - 174332312 agTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GGATAGCTAGTATTGC-CA-CCT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39244 66 +    559221 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40128 66 -     51505 CCTAGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ACAGTGTTGC-CA-CCT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             353130 66 +   1103335 CCTAGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ACAGTGTTGC-CA-CCT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404174 66 -  44047080 CGTCACCCTTAATGTAATT-GGTGT-CACCTTAGCCTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4693 66 +     17875 CGTCACCCTTAATGTAATT-GGTGT-CACTTTAGCCTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001031.1                                 1202 60 -      1297 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----TAAAGACTG--------
i Pan_paniscus.AJFE02001031.1                            I 6 I 8
s Pan_troglodytes.NBAG03003091.1                             12418 69 -     26668 agTCACCCTTAATTAGATT-GGTGTCCACCTTAGCCTTTAGAAG-GG--TAAATA-AA---GG----ATAGTATTGC-CACC--
i Pan_troglodytes.NBAG03003091.1                         I 6 I 142
s Panthera_onca.PanOnc_flattened_line_3271                   24474 66 -    230217 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461800 66 -  18783137 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972459 66 +   8748460 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615701 66 +   2937107 CGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCC
i Pantholops_hodgsonii.KE114653.1                        C 0 I 1
s Papio_anubis.CM001495.2                                   243141 64 - 183742232 AGTTGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Papio_anubis.CM001495.2                                I 6 I 13
s Papio_cynocephalus.k141_1507553                             9603 64 +     21308 AGTTGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Papio_cynocephalus.k141_1507553                        I 6 I 13
s Papio_hamadryas.Contig39                                  292176 64 -  20919399 AGTTGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Papio_hamadryas.Contig39                               I 6 I 13
s Papio_kindae.k141_2214839                                  22251 64 -     27687 AGTTGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Papio_kindae.k141_2214839                              I 6 I 13
s Papio_papio.k141_799093                                    15397 66 +     16796 AGTTGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22208 66 -     23640 AGTTGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15065 66 +     78924 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26326 66 +     31479 CATAGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GCAGTGTTGC-CA-TCT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18696 66 -     24908 CATAGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GCAGTGTTGC-CA-TCT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1781 67 +      9367 TGTCACTCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAGGGG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246862 66 +  18517816 agtcacccttaatttaatT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATGGGATTGC-CA-CCT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     31938 66 -     56120 TGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--CA---A-TA---GG----ATAATATTGC-CA-CCT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12772 66 -     15039 AGTCACCCTTAATTAAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2421 64 +     55023 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--CA---A-TA---GG----ATAGTATTGC-CA-C--
i Piliocolobus_badius.k141_2704958                       I 16 I 13
s Piliocolobus_gordonorum.k141_381342                         1971 64 -     89929 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--CA---A-TA---GG----ATAGTATTGC-CA-C--
i Piliocolobus_gordonorum.k141_381342                    I 18 I 13
s Piliocolobus_kirkii.k141_1310104                            2560 64 +     40849 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--CA---A-TA---GG----ATAGTATTGC-CA-C--
i Piliocolobus_kirkii.k141_1310104                       I 18 I 13
s Piliocolobus_tephrosceles.PDMG02000141.1                  254224 64 +  14605196 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--CA---A-TA---GG----ATAGTATTGC-CA-C--
i Piliocolobus_tephrosceles.PDMG02000141.1               I 6 I 13
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3754 66 +     22231 AGTCACCCTTACTCTAATT-GGTGT-CACCTTGGCTTTTAGTAA-GG--CA---A-TA---GG----ATCGCACTGT-CA-CCT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64845 66 +    207309 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          5938 65 -     25401 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-C-T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31681 66 +     58159 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         31957 66 +     63561 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31717 66 +     51148 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556687 66 -   4542175 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31701 66 +     51125 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4861 66 -      8168 AGTCACCCTTAAGTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8112 66 +     39866 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3196 66 -      9282 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42600 66 -     87950 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     42994 66 -     88961 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7692 66 -     39403 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42643 66 +     87928 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7689 66 -     60166 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14626 66 -     67232 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42542 66 -     90634 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44009 66 +     89403 AGTCGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177919 64 - 189387572 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGAAG-GG--TA---G-TA---GG----ATAGTATTGC-CA-C--
i Pongo_abelii.CM009266.2                                T 6416 I 13
s Pongo_pygmaeus.ctg66                                      192736 64 -   9816681 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGAAG-GG--TA---G-TA---GG----ATAGTATTGC-CA-C--
i Pongo_pygmaeus.ctg66                                   T 6341 I 13
s Presbytis_comata.k141_1230337                              27546 64 +     69807 AGTCACCCTGAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Presbytis_comata.k141_1230337                          I 6 I 13
s Presbytis_mitrata.k141_584736                              44732 64 -     80239 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Presbytis_mitrata.k141_584736                          I 6 I 13
s Procavia_capensis.ProCapCap_scaffold_165387                  162 66 +      7663 GGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTGGTTTTGT-CA-CCT
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982594 65 +   4620579 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566102 65 -   2598838 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----CTAGCATCGC-CA-CCT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3740 65 -      7103 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----CTAGCATCGC-CA-CCT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4337 65 -     11706 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----CTAACATCGC-CA-CCT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8075 65 -     30655 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----CTAACATCGC-CA-CCT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34388 65 +     46564 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----CTAACATTGC-CA-CCT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94667 65 -     98465 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----CTAGCATCGC-CA-CCT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8306 65 +     35169 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----CTAGCATCGC-CA-CCT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37469 66 +     52041 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATGGGATTGC-CA-CCT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52143 66 -     66298 GGTCGCCCTTACCTTAATT-GGTGT-CACCTTAGCTTTTAGTCA-GG--TA---A-TA---GC----ATGGCACTGC-CA-CCT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4657 66 -     18639 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840833 66 -  28871421 AGTCACCCTTACTTTAATT-GGTGT-CACCTTAGCTTTTAGTCG-GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537352 66 -   4952924 AGTCACCCTTACTTTAATT-GGTGT-CACCTTAGCTTTTAGTCA-GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099117 66 +  38429054 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----GTAGTATTAC-CA-CCT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26920 64 +     91421 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Pygathrix_cinerea.k141_1153803                         I 6 I 13
s Pygathrix_nigripes_b.ctg100                                  153412 64 -   7812017 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Pygathrix_nigripes_b.ctg100                               I 6 I 13
s Pygathrix_nigripes_a.k141_215492                              7787 64 +     72585 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Pygathrix_nigripes_a.k141_215492                         I 6 I 13
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53189 66 +     55069 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCC
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022753 66 -  90668790 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATGGGATTGC-CA-CCT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914730 65 +   3329780 AGTCACCCTTACTTTAATT-GGTGT-CACCTTAGCTTTTAGTAA-GG--TA---A-TA---AG----ATAGTATTTT-C--CCT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             1493 64 +      7119 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Rhinopithecus_bieti.k119_778604                        I 6 I 13
s Rhinopithecus_roxellana.NC_044550.1                    104122101 64 + 195417433 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Rhinopithecus_roxellana.NC_044550.1                    I 6 I 13
s Rhinopithecus_strykeri.ctg102                             236343 64 -   7961872 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Rhinopithecus_strykeri.ctg102                          I 6 I 13
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74766 66 -    116970 AGTCACCCCTACTTTAATT-GGTGT-CACCTTAGCTTTTAGTCG-GG--TA---A-TA---GG----ATAGCATTGC-CA-CCT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4001 66 +     27962 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTTTTGC-CA-CCT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3896 66 +      6077 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTTTTGC-CA-CCT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             3986 66 +      5971 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3907 66 +      5932 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2249 66 -      4390 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTATTGC-CA-CCT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391686 66 - 209938924 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTTTTGC-CA-CCT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3856 66 +      5979 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ACAGTTTTGC-CA-CCT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                425 66 -     22275 AGTCACCCTTAATCTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGAGTTTTGC-CA-CCT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7862 66 +     16473 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-TA-CCC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109023 66 + 121099817 AGTCACCCTCAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TG---A-CA---GG----AGAGTATTGT-CT-CCT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30590 66 -     47369 AGTCACCCTCAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TG---A-CA---GG----AGAGTATTGT-CT-CCT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              30976 66 -     79414 AGTCACCCTCAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TG---A-CA---GG----AGAGTATTGT-CT-CCT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27667 66 -     34454 AGTCACCCTCAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TG---A-CA---GG----AGAGTATTGT-CT-CCT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15068 66 -     22428 AGTCACCCTCAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TG---A-CA---GG----AGAGTATTGT-CT-CCT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30222 66 -     47109 AGTCACCCTCAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TG---A-CA---GG----AGAGTATTGT-CT-CCT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238276 66 +   5703754 AGTCACCCTCAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGACTATTGC-CA-CCT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7866 66 +     21866 AGTCACCCTCAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----AGACTATTGC-CA-CCT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115904 66 +    313613 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAA-GG--TA---A-TA---AG----ATACTATTGC-CA-CCT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25239 66 +     27374 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28753 64 +     58920 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Semnopithecus_hypoleucos.k141_1910531                  I 6 I 13
s Semnopithecus_johnii.k141_843753                           15249 64 -     45317 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Semnopithecus_johnii.k141_843753                       I 6 I 13
s Semnopithecus_priam.k141_714795                            22908 64 -     42441 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Semnopithecus_priam.k141_714795                        I 6 I 13
s Semnopithecus_schistaceus.k141_1432920                     25586 66 -     29113 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28660 51 -     48123 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG---------------------
i Semnopithecus_vetulus.k141_244474                      I 6 I 26
s Sigmodon_hispidus.SigHis_scaffold_20193                    49239 66 +     77746 AGTCACCCTTGATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATGGAATTGC-CA-CCT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864188 66 -   1910179 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTTTTGC-CA-CCT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671339 66 +  18376816 AGTCACCCTTATTTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--CA---A-TA---AG----ATAGCTTTGC-CA-CCT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868376 66 +   3870691 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---GG----CTAGTATTGC-CA-CCT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6727 66 -     97271 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTACTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124887 66 +    196729 AGTCACCATTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CTT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643777 66 +  69701581 agTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----CTTGTATTGC-CA-CCT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391178 64 +   1523678 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCCTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Symphalangus_syndactylus.tarseq_199                    T 4783 I 13
s Tadarida_brasiliensis.TadBra_scaffold_54991                14318 66 +     22964 AGTCACCCTTACTTTAATT-GGTGT-CACTTTAGCTTTTAGTAA-GG--TA---A-TA---GG----ATAGTACTGC-CA-CCT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2714 64 +      5583 AGTCAC--TCAATTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191621 66 +    199430 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----CTAGTAGTGC-CA-CCT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105591 66 -    539355 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----CTAGTAGTGC-CA-CCT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 639 66 +      9917 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGCATTGC-CA-CTT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7429 66 +     20590 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGCATTGC-CA-CTT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353127 64 - 186847797 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGACG-GG--TA---A-TA---GG----ATAGCATTGC-CA-C--
i Theropithecus_gelada.CM009954.1                        I 6 I 13
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24094 66 -     33621 TGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGCAG-GG--CA---A-TA---GT----ATAATATTGT-CA-CCT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19812 64 -     31044 GGTCCC--TCAATTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---GG----ATGGTACTGC-CA-CCT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480139 66 -    610378 AGTCACCCTCACTTTAATT-GGTGT-CACCTTAGCTTTTAGTAA-GG--TA---A-TA---GG----ATGGTACTGC-CA-CCT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20785 64 +     26378 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Trachypithecus_auratus.k141_1189070                    I 6 I 13
s Trachypithecus_crepusculus.k141_539312                     33463 64 -     78344 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Trachypithecus_crepusculus.k141_539312                 I 6 I 13
s Trachypithecus_cristatus.k141_180416                       20110 64 +     25722 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Trachypithecus_cristatus.k141_180416                   I 6 I 13
s Trachypithecus_francoisi.k141_1453105                      28416 64 -     62838 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Trachypithecus_francoisi.k141_1453105                  I 6 I 13
s Trachypithecus_geei.k141_1001272                           28461 64 +     46913 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Trachypithecus_geei.k141_1001272                       I 6 I 13
s Trachypithecus_germaini.k141_57262                          9268 64 -     28527 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----CTAGTATTGC-CA-C--
i Trachypithecus_germaini.k141_57262                     I 6 I 13
s Trachypithecus_hatinhensis.k141_31479                      30352 64 -     64340 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Trachypithecus_hatinhensis.k141_31479                  I 6 I 13
s Trachypithecus_laotum.k141_928651                          28389 64 -     63452 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Trachypithecus_laotum.k141_928651                      I 6 I 13
s Trachypithecus_leucocephalus.k141_96450                     9835 64 +     22490 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Trachypithecus_leucocephalus.k141_96450                I 6 I 13
s Trachypithecus_melamera.k141_591572                         3260 66 -      6147 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10165 66 -     13050 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255405 64 -   6242583 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Trachypithecus_phayrei.ctg124                          I 6 I 13
s Trachypithecus_pileatus.k141_2622778                        1429 64 +     19340 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGAAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-C--
i Trachypithecus_pileatus.k141_2622778                   I 6 I 13
s Tragulus_javanicus.TraJav_scaffold_3462                   173474 66 -    200418 AGTCACCCTTAACTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----CTAGTATTGC-CA-CCC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 1
s Trichechus_manatus.JH594705.1                            6480452 66 -  10818551 AGTCACCCTTAACTTAATT-GGTGT-CACCTTAGCTTTTAGGAG-GG--TA---A-TA---GG----CTGGTCTTGC-CA-CCT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834123 66 -   4065304 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TT---GG----ATAGCATCGC-CA-CCT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8144 66 -     70247 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TT---GG----ATAGCATTGC-CA-CCT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361673 66 -  33153633 AGTCACCCTTAATTAAGTT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3644 66 -     21056 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAA-GG--TA---A-TA---GG----GTAGTATTGC-CA-CCT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181832 66 +   5085361 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAA-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25243 65 -     30710 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----CTAGCATTGC-CA-CCT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24150 65 -    147434 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTA--GG--TA---A-TA---GG----CTAGCATTGC-CA-CCT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76309 66 +   5488506 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAATAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CTT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                104966 66 -    112863 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174163 66 -    224448 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28862 66 -     86975 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----ATAGTATTGC-CA-CCT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                       634 66 -       833 AGCTGCCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--CA---A-CA---GG----ACTATATTGC-CA-CCT
i Zapus_hudsonius.ZapHud_scaffold_501999                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595            1080 66 +      1812 AGTCACCCTTAATTTAATT-GGTGT-CACCTTAGCTTTTAGTAG-GG--TA---A-TA---GG----GTAGTATTGC-TA-CCT
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 C 0
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Hipposideros_armiger.JXIK01000431.1                      1554070 2335 -   1711038 T

a score=0.000000
s hg38.chrUn_KI270755v1                                       5532 48 +     36723 GCAATCATTC-AAGACTATT-TTACTCACT-ACAGTAATTAGCTCACTT--TA
s Acinonyx_jubatus.LLWD01001279.1                           812925 42 +   1699592 GCAATCATTC-AAGACTACC-TTTCTCAC------TAATTAGCTCACTT--A-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25200 42 +     63021 GCAATCATTC-AAGGCTACT-TTGCTCAC------TAATTAGTTTACTT--A-
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415384 43 +  29979442 GCAATCATTC-AAGACTACC-TTGCTCAC------TAAttagctcactt--aa
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215693 43 +    347723 GCAATCATTC-AAGACTACA-TCGCTCAC------TAAttagctcactt--aa
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18143 42 -     61208 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATTAGCTCACTT--A-
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47859 37 +     53615 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Allenopithecus_nigroviridis.k141_3755588               I 13 C 0
s Allochrocebus_lhoesti.k141_441277                          43830 48 +     44087 GCAATCATTC-AAGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--AA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16449 37 -     21945 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Allochrocebus_preussi.k141_1993939                     I 13 C 0
s Allochrocebus_solatus.k141_3554717                         18132 37 +     32033 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Allochrocebus_solatus.k141_3554717                     I 13 C 0
s Alouatta_belzebul.k141_1011583                             72284 48 -     84148 GCAATCATTC-AAGACTATT-TTGCTCACG-ACAGTAATTAGCTCCCTT--TA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44523 48 -     78289 GCAATCATTC-AAGACTATT-TTGCTCACG-ACAGTAATTAGCTCCCTT--TA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             43962 48 +     55831 GCAATCATTC-AAGACTATT-TTGCTCAGG-ACAGTAATTAGCTCCCTT--TA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42412 48 -     64179 GCAATCATTC-AAGACTATT-TTGCTCACG-ACAGTAATTAGCTCCCTT--TA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24046 48 -     24835 GCAATCATTC-AAGACTATT-TTGCTCACG-ACAGTAATTAGCTCCCTT--TA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41037 48 +     45454 GCAATCATTC-AAGACTATT-TTGCTCACG-ACAGTAATTAGCTCCCTT--TA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46686 48 +     70886 GCAATCATTC-AAGACTATT-TTGCTCACG-ACAGTAATTAGCTCCCTT--TA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8859 48 +     30854 GCAATCATTC-AAGACTATT-TTGCTCACG-ACAGTAATTAGCTCCCTT--TA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             32993 48 +     42133 GCAATCATTC-AAGACTATT-TTGCTCACG-ACAGTAATTAGCTCCCTT--TA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585373 43 +   2318259 AAAATCATTC-AAGACTACA-TTGCTCAC------TAATtaactcactt--aa
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177163 43 -    412891 GCCATTATTC-AAGACAACT-TTGCTCAC------TAATTAACTCACTA--AA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50480 43 -     68529 CAAATCATTC-AAGACTACA-TTGCTCAC------TAATTAATTCACTT--AA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 1
s Aotus_azarae.k141_887050                                    1240 48 +     17741 GCAATCATTC-AAGACTATT-TTGCTCAGT-ACAGTAATTAGCTCACTT--TA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1865 48 -     15923 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672147 48 +   5030052 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTagctcactt--ta
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2141 48 -     16391 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1700 48 -     17186 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16062 42 -     32367 GCAATCATTC-AAGACTACT-TTACTCAC------TAATTAGCTCTCTT--G-
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19597 48 -     45910 GCAGTTATTT-AAGACTGGC-TCACTTGCT-ACAGTAATTAGCTCACTT--AA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5438 43 -     15198 GCCATCATTC-AAGACAACT-CTGCTCAC------TAATTACCTCACTA--AA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274738 48 +  21539123 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCCCTT--TA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10904 48 +     48076 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCCCTT--TA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6041 48 -     28759 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCCCTT--TA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33595 48 +     44353 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCCCTT--TA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              48964 48 -     71267 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCCCTT--TA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23024 48 -     33135 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCCCTT--TA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6271 48 +     11645 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCACTT--AA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6279 48 -     19611 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCACTT--AA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7957262 43 -  23207421 GCAATCATTC-AAGATTATT-TTGCTCGC------TAATtaactcactt--aa
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 6261
s Balaenoptera_bonaerensis.DF507193.1                         4471 43 -      4711 GCAATCATTC-AAGATTATT-TTGCTCGC------TAATtaactcactt--aa
i Balaenoptera_bonaerensis.DF507193.1                    C 0 N 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86381 43 +    124022 AAAATCATTC-AAGACTACA-TTGCTCAC------TAATTAACTCACTT--AA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21914 43 +    288883 AAAATCATTC-AAGACTACA-TTGCTCAC------TAATtaactcactt--aa
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356307 43 +  48749331 AAAGNCATTC-AAGACTACA-TTGCTCAC------TAATTAactcactt--aa
i Bos_indicus.CM003047.1                                 C 0 I 1
s Bos_mutus.JH880303.1                                      754870 43 +   1948126 AAAGTCATTC-AAGACTACA-TTGCTCAC------TAATtaactcactt--aa
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545013 43 -  45695690 AAAGTCATTC-AAGACTACA-TTGCTCAC------TAATTAactcactt--aa
i Bos_taurus.CM000203.6                                  C 0 I 1
s Bubalus_bubalis.KI419123.1                               1530033 43 -   4408762 AAAATCATTC-AAGACTACA-TTGCTCAC------TAATtaactcactt--aa
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7913 48 +     28062 GCAATCATTC-AAGACTATT-TTGCTTACT-ACAGTAATTAGCTCACTT--TA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43207 48 -     91139 GCAATCATTC-AAGACTATT-TTGCTTACT-ACAGTAATTAGCTCACTT--TA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20733 48 +     95584 GCAATCATTC-AAGACTATT-TTGCTTACT-ACAGTAATTAGCTCACTT--TA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20646 48 +    119600 GCAATCATTC-AAGACTATT-TTGCTTACT-ACAGTAATTAGCTCACTT--TA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10220 48 +     18648 GCAATCATTC-AGGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9755 48 -     13885 GCAATCATTC-AGGACTATT-GTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1825 48 -      8861 GCAATCATTC-AGGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454217 48 + 189096842 GCAATCATTC-AGGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1740 48 +      8664 GCAATCATTC-AGGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631041 43 +  17673402 GCAATCATTC-AAGACTACT-TTGTGCGC------TAATTAGCTCacct--aa
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           4665327 43 +   7040546 GCAATCATTC-AAGACTACT-TTGTGCGC------TAATTAGCTCacct--aa
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                 1208987 43 +   1652518 GCAATCATTC-AAGACTACT-TTGTGCGC------TAATTAGCTCacct--aa
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           42505401 43 +  60362399 GCAATCATTC-AAGACTACC-TTGCTCAC------TAATTAGCTCACTT--AA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9037 43 -     23171 GCAATCATTC-AAGACTACC-TTGCTCAC------TAATTAGCTCACTT--AA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222380 43 +   9314153 GCAATCATTC-AAGACTACC-TTGCTCAC------TAAttagctcactt--aa
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615515 43 +  59632846 GCAATCATTC-AAGACTACC-TTGCTCAC------TAAttagctcactt--aa
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107096 43 -  63665305 GCAATCATTC-AAGACTACC-TTGCTCAC------TAAttagctcactt--aa
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409102 43 -  46296322 AAAATCATTC-AAGACTACA-TTGCTCAC------TAATtaactcactt--aa
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591376 43 +  44709034 AAAATCATTC-AAGACTACA-TTGCTCAC------TAATtaactcactt--aa
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1588 42 -      1880 GCAATCATTC-AAAACTACT-TAAGTCAC------TAATTAGCTCACTT--A-
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270478 48 +    496798 GCAATCATTC-AAGGCCACT-TTGTTCACT-GCAGTAATtagctcactt--aa
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_107871                279 43 +      9923 GCCATCATTC-AAGCTAACT-TTGCTCAC------TAATTAACTCACTA--AA
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27722 42 -     39886 GCAGCCATTC-ACTACTACT-TTGCTCAC------TAATTAACTCCCTT--T-
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79577 43 -    217609 GCAATCATTC-AAGACTATT-TTGCTCAC------TAAATAGCTCACTT--AA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996436 42 +  23392119 GCAATNNNNN-NNNACTACT-TAGCTCAC------TAATTAGCTCACTT--A-
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999878 42 +  23407841 GCAATCACTC-AAAACTACT-TAGCTCAC------TAATTAGCTCACTT--A-
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       62959 42 -     66877 GCAATCACTC-AAAACTACT-TAGCTCAC------TAATTAGCTCACTT--A-
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5138 48 -     12580 GCAATCATTC-AGGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43196 48 +     53515 GCAATCATTC-AGGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371126 46 -  26074798 GCAATCATTC-AAGACTA---CTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8015 46 -     34880 GCAATCATTC-AAGACTA---CTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67110 46 -     89041 GCAATCATTC-AAGACTA---CTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2442 48 -      5494 GCAATCATTC-AAGGCCACT-TTGTTCACT-GCAGTAATTAGCTCACTT--AA
i Cephalopachus_bancanus.k141_1689090                    C 0 I 1
s Ceratotherium_simum.JH767749.1                          15492212 43 -  27778364 GCGATCATTC-AAGACCACT-TTGCTCAC------TAATTGcctcactt--aa
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19045 43 +     27315 GCAATCATTC-AAGACCACT-TTGCTCAC------TAATTGCCTCACTT--AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 1
s Cercocebus_atys.KQ010504.1                                141036 37 -   4669795 ------------AGACTGTT-TTGCTCACT-ACAGTAATtagctcactt--ta
i Cercocebus_atys.KQ010504.1                             I 13 C 0
s Cercocebus_chrysogaster.k141_1522556                       44767 48 +     47900 GCAATCATTC-AAGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44591 48 -     44860 GCAATCATTC-AAGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44591 37 -    148725 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cercocebus_torquatus.k141_2159127                      I 13 C 0
s Cercopithecus_ascanius.k141_3120866                        26778 37 -     40656 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cercopithecus_ascanius.k141_3120866                    I 13 C 0
s Cercopithecus_cephus.k141_4183004                           6744 37 +     20796 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cercopithecus_cephus.k141_4183004                      I 13 C 0
s Cercopithecus_diana.k141_132293                            11861 37 -     17524 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cercopithecus_diana.k141_132293                        I 13 C 0
s Cercopithecus_hamlyni.k141_566925                          27583 37 -     34525 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cercopithecus_hamlyni.k141_566925                      I 13 C 0
s Cercopithecus_lowei.k141_2101310                           11365 37 -     25376 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cercopithecus_lowei.k141_2101310                       I 13 C 0
s Cercopithecus_albogularis.ctg5                                  363960 37 -  39242232 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cercopithecus_albogularis.ctg5                               I 13 C 0
s Cercopithecus_mona.ctg39                                  269677 37 +  21565898 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cercopithecus_mona.ctg39                               I 13 C 0
s Cercopithecus_neglectus.k141_858615                        32050 37 -     45857 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cercopithecus_neglectus.k141_858615                    I 13 C 0
s Cercopithecus_nictitans.k141_2995370                       26949 37 -     32606 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cercopithecus_nictitans.k141_2995370                   I 13 C 0
s Cercopithecus_petaurista.k141_42573                         3108 37 +      8499 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cercopithecus_petaurista.k141_42573                    I 13 C 0
s Cercopithecus_pogonias.k141_6079                           25505 37 +     70610 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cercopithecus_pogonias.k141_6079                       I 13 C 0
s Cercopithecus_roloway.k141_3012935                         22475 37 +     36323 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cercopithecus_roloway.k141_3012935                     I 13 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12787 43 -     19938 GCAATCATTC-AAGACTACT-TTGCTCGC------TAATTAGCTCACTT--AT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30646 47 -     33796 GCAATCATTT-AAGACTACT-TTGCTCACC-ATAGTAATTAGCTCAC-T--TA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5163 47 -     15404 GCAATCATTC-AAGACTACT-TTGCTCACC-ATAGTAATTAGCTCAC-T--TA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9013 48 -     32913 GCAATCACTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19426 48 -     40346 GCAATCACTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19681 48 +    216457 GCAATCACTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19474 48 +     39636 GCAATCACTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238813 42 -   2543920 GCAATCATTC-AGAACCACT-TAACTCAC------TAATTAGctcactt--a-
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4069 48 +      5346 GCGATCATTC-AGGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42544 48 -    112038 GCAATCATTC-AAGACTATT-TTGCTTACT-ACAGTAATTAGCTCACTT--TA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8115 48 +     34062 GCAATCATTC-AAGACTATT-TTGCTTACT-ACAGTAATTAGCTCACTT--TA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343366 36 +  18827391 ------------AGACTGTT-TTGCTCACT-ACA-TAATTAGCTCACTT--TA
i Chlorocebus_aethiops.ctg25                             I 13 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9913 37 -     44032 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Chlorocebus_pygerythrus.k141_3063162                   I 13 C 0
s Chlorocebus_sabaeus.CM001947.1                            304690 37 - 135778131 ------------AGACTGTT-TTGCTCACT-ACAGTAATtagctcactt--ta
i Chlorocebus_sabaeus.CM001947.1                         I 13 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14827 43 +     15858 GCAATCATTC-AAGACTACT-TTCCTCGC------TAATTAGCACGCTT--AA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606402 43 -    839153 GCAATCATTC-AAGACTACT-TTCCTCGC------TAATTAACGcgctt--aa
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                824 43 +      2406 TTAATCATTC-AAGAATACG-TAGCTCAC------TAATTAACCCACTT--AA
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409115 37 -   2368649 ------------AGACTGTT-TTGCTCACT-ACAGTAATTagctcactt--ta
i Colobus_angolensis.KN981557.1                          I 13 C 0
s Colobus_guereza.LG01                                      378991 37 - 200372422 ------------AGATTGTT-TTGCTCACT-ACAGTAATTATCTCACTT--TG
i Colobus_guereza.LG01                                   I 13 C 0
s Colobus_polykomos.k141_906115                               2540 37 -     84244 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Colobus_polykomos.k141_906115                          I 13 C 0
s Condylura_cristata.JH655891.1                           35807280 43 +  53390261 GCAATCATTC-AATACTACT-TTACTCAC------TAATTagctcactt--aa
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2793 43 -      8242 GCAATCATTC-AAGATGACT-TTGCTCAC------TAATTAGCTCACTT--AA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_14425                 44341 42 -     83289 GCAATTATTC-AAGGCTACT-TTGCTGGC------TAATTAGCTTACTT--A-
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213114905 42 - 224834208 GCAATCATTC-AAGGCTACT-TTGCTTGA------TAATTAGCTTACTT--C-
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9490 43 +     12657 GCAATCATTC-AAAACTACT-TTGCTCAC------TAATTAACTCACAT--AA
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4370 43 +     87169 GCAATCATTC-AAGACTACC-TTTCTCAC------TAATTAGCTCACTT--AA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645036 40 -   1526836 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATTAGCTCAC----A-
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18380 42 +     50838 GCAATCATTC-AAAACTACT-TAACTCAC------TAATTAGCTCACTT--A-
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4359 42 +     36344 GCAATCATTC-AAAACTACT-TAGTTCAC------TAATTAGCTCACTT--A-
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28135 42 +     75252 GCAATCATTC-AAAACTACT-TAGCTCAC------TAATTAGCTCACTT--A-
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110137 43 -   2246927 GCAATCATTC-AAGACTACT-TTGCCCGC------TAATTAGCTCACTT--AC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292584 48 +  12879189 GCAATCATTC-AAGACTACT-TTGCACACT-ACGGTAATTAGCTCACTT--AA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18625799 43 -  35494412 GCAATCACTC-AAGATTATT-TTGCTCAC------TAATtaactcactt--aa
i Delphinapterus_leucas.KZ290073.1                       C 0 I 6132
s Desmodus_rotundus.KZ672366.1                              330479 43 -   2620052 GCCATCATTC-AAGACAACT-TTGCTCAC------TAATTAActcacta--aa
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664494 43 -   1390856 GCAATCATTC-AAGACCACT-TTGCTCAT------TAATTGcctcactt--aa
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                  139289 43 -    198055 GCAATCATTC-AAGACCACT-TTGCTCAC------TAATTGCCTCACTT--AA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Dinomys_branickii.DinBra_scaffold_10381                    98899 42 -    115145 GCAATCATTC-AGAACTACT-TAAATCAC------TAATTAGCTCACTT--A-
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950519 40 -  37912305 GTAGTCATTT-AGGACTACT-TTGCTCAC------TAATTAACTCACT-----
i Dipodomys_ordii.KN672350.1                             C 0 I 4
s Dipodomys_stephensi.DipSte_scaffold_89095                   5457 40 -     10735 GTAGTCATTT-AGGACTACT-TTGCTCAC------TAATTAACTCACA-----
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10395 42 +     14636 GCAATCATTC-AGAACTACT-TAGCTCAC------TAATTAGCTCACTT--A-
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62855096 42 - 111700974 GCAATCATTC-AAGAGTACT-TTGCTCAC------TAAttaactc-att--aa
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6251 43 +     19438 GCAATCATTC-AAGACTACT-TTCCTCAC------TAATTagctcactt--aa
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239742 43 -    607251 AAAATCATTC-AAGACTACA-CTGCTCAC------TAATtaactcactt--aa
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108765 37 -  10337057 GTAATCACTC-AAGACTACA-TTGTTCAc------taattaact--------a
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31053 42 +    110024 GCAATCATTC-AAGGCTACT-TTGCTCAC------TAATTagcttactt--a-
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13024 42 +     18970 GCAATCATTC-AAGGCTACC-TTGCTCAC------TAATTagcttactt--a-
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916122 43 +  41312741 GCAATCATTC-AAGACTACC-TTGCTCAC------TAAttagctcactt--aa
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578913 42 +  14770903 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATTACCTCACTT--A-
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041373 43 -   4378816 GCAATCATTC-AAGACCACT-TTGCTCGC------TAATGagctcactt--aa
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375311 43 +  39960074 GCAATCATTC-AAGACCACT-TTGCTCGC------TAATGagctcactt--aa
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             692 43 -      1194 GCAATCATTC-AAGACCACT-TTGCTCGC------TAATGagctcactt--aa
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666076 45 +   7059049 GCAATCATTC-AAGACTGCT-TTGCTCAC------TAATTACCTTACTGGAAA
i Erinaceus_europaeus.JH835339.1                         C 0 I 1
s Erythrocebus_patas.Contig38                               262893 37 +  21539334 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Erythrocebus_patas.Contig38                            I 13 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           65138 43 -    133382 TCAATCATTC-AAGATTATT-TTGCTCGC------TAATTAACTCACTT--AA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 6002
s Eubalaena_japonica.EubJap_flattened_line_118172             5357 43 +      7672 GCAATCATTC-AAGATTATT-TTGCTCGC------TAATTAACTCACTT--AA
i Eubalaena_japonica.EubJap_flattened_line_118172        C 0 N 0
s Eulemur_albifrons.k141_51491                               14793 47 -     24895 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCAC-T--TA
i Eulemur_albifrons.k141_51491                           C 0 I 1
s Eulemur_collaris.k141_601111                               42502 47 -     70999 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCAC-T--TA
i Eulemur_collaris.k141_601111                           C 0 I 1
s Eulemur_coronatus.k141_384460                              86464 47 +    112731 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCAC-T--TA
i Eulemur_coronatus.k141_384460                          C 0 I 1
s Eulemur_flavifrons.k141_433119                             43033 47 +     68309 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCAC-T--TA
i Eulemur_flavifrons.k141_433119                         C 0 I 1
s Eulemur_fulvus.k141_636316                                 53359 47 -     65740 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCAC-T--TA
i Eulemur_fulvus.k141_636316                             C 0 I 1
s Eulemur_macaco.k141_1562045                                23988 47 -     75513 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCAC-T--TA
i Eulemur_macaco.k141_1562045                            C 0 I 1
s Eulemur_mongoz.k141_232305                                 48186 47 -     97555 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCAC-T--TA
i Eulemur_mongoz.k141_232305                             C 0 I 1
s Eulemur_rubriventer.k141_1423786                            4910 47 +     30972 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCAC-T--TA
i Eulemur_rubriventer.k141_1423786                       C 0 I 1
s Eulemur_rufus.k141_514691                                  42630 47 -     52037 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCAC-T--TA
i Eulemur_rufus.k141_514691                              C 0 I 1
s Eulemur_sanfordi.k141_1122526                              59032 47 -    111500 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCAC-T--TA
i Eulemur_sanfordi.k141_1122526                          C 0 I 1
s Felis_catus.CM001381.2                                 186246834 42 - 206538554 GCAATCATTC-AAGACTACC-TTTCTCAC------TAATTAGCTCACTT--A-
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116620 42 - 205367284 GCAATCATTC-AAGACTACC-TTTCTCAC------TAATTAGCTCACTT--A-
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27717 42 -     30238 GCAATCATTC-AAGACTACC-TTTCTCAC------TAATTAGCTCACTT--A-
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916436 42 -   3816255 GCAATCAGTC-AAAGCTACT-TAGCTCAC------TAATTAGcttactt--a-
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     125032 48 -    137831 GCAGTCATTC-AAGACTGGC-TCACTTGCT-ACAGTAATTAGCTCACTT--AA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8577 48 +     22493 GCAGTCATTC-AAGACTGGC-TCACTTGCT-ACAGTAATTAGCTCACTT--AA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20649 48 -     32986 GCAGTCATTC-AAGACTGGC-TCACTTGCT-ACAGTAATTAGCTCACTT--AA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1189 43 -     28519 GCAATCATTC-AAGACTACT-TTGCTTGC------TAATTAGCTCACTT--AA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91445 43 -     95226 AAAATCATTC-AAGACTACA-TTGCTCAC------TAATtaactcactt--aa
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34514 42 -     36801 GCAATCATTC-AAGACTGCT-CTACTCAC------TAATTAGCTCACTT--A-
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5832 48 -      8343 GCAATCATTC-AAGACTATT-TTACTCACT-ACAGTAATTAGCTCACTT--TA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254858 37 - 186649187 ------------AGACTATT-TTACTCACT-ACAGTAATTagctcactt--ta
i Gorilla_gorilla.LT578341.1                             I 33 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2009 42 -     78134 GCAATCATTC-AAGATGGCT-CTACCCAC------TAATTAACTCACTT--A-
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14718 47 -     40692 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGCAATTAGCTCAC-T--TT
i Hapalemur_alaotrensis.k141_330369                      C 0 I 1
s Hapalemur_gilberti.k141_646465                             36120 47 +     49394 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGCAATTAGCTCAC-T--TT
i Hapalemur_gilberti.k141_646465                         C 0 I 1
s Hapalemur_griseus.k141_763500                              60988 47 -     66874 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGCAATTAGCTCAC-T--TT
i Hapalemur_griseus.k141_763500                          C 0 I 1
s Hapalemur_meridionalis.k141_258450                          9862 47 -     42923 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGCAATTAGCTCAC-T--TT
i Hapalemur_meridionalis.k141_258450                     C 0 I 1
s Hapalemur_occidentalis.k141_578367                         16862 47 -     53142 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGCAATTAGCTCAC-T--TT
i Hapalemur_occidentalis.k141_578367                     C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585                30800 43 -    327341 GCAATCATTC-ATGACTACC-GTTCTCAC------GAATTAGCTCCCCT--AA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9120 43 +     48891 AAAATCATTC-AAGGCTACA-TTGCTCAC------TAATTAACTCACTT--AA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932405 42 -  22651954 GCAATCATTC-AAAACTATT-TACATCAC------TAATTAGctcactt--a-
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                 455 43 +      4291 GCAATCACTC-AAGACTACT-CTGCTCAC------TAATTAACTCACTT--GA
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7644 43 -     36432 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATTAACTCACTT--AA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1083 43 -      2730 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATTAGCTCACTT--AA
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 1
s Hoolock_leuconedys.ctg274                                    142867 37 -    630532 ------------AGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Hoolock_leuconedys.ctg274                                 I 13 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69716 43 +     83186 GCAATCATTC-AAGACTACC-TTTCTCAC------TAATGAGCTCACTT--TA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71872 41 +    143317 GCAATCATTC-A-AACTACT-TATCTCAC------TAATTAGCTCACTT--A-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5901 37 +     12352 ------------AGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Hylobates_agilis.k141_1155965                          I 13 C 0
s Hylobates_klossii.k141_738755                              13085 37 +     55766 ------------AGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Hylobates_klossii.k141_738755                          I 13 C 0
s Hylobates_pileatus_b.LG02                                       2052685 37 + 191637585 ------------AGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Hylobates_pileatus_b.LG02                                     I 13 C 0
s Hylobates_pileatus_a.tarseq_633                            7801563 37 +  11177569 ------------AGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Hylobates_pileatus_a.tarseq_633                          I 13 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4510 42 -    135385 GCAATCATTC-AAAACTACT-TAGCTCAC------TAATTAGCTCCCTT--A-
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386863 42 +   7955117 GCAATCATTC-AAGACTACT-TTACTCAC------TAATTAGCTCACTT--G-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2418 48 +     11955 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCACTT--AA
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447                3616 43 -     16823 GCAATCACTC-AAGATTATT-TTGCTCAC------TAATTAACTCACTT--AA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 6415
s Jaculus_jaculus.JH725527.1                               1239848 42 +   9596543 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATTAACTCACTT--A-
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 65856 43 -     97402 GCAATCACTC-AAGATTATT-TTGCTCAC------TAATTAACTCACTT--AA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 6018
s Lagothrix_lagothricha.k141_246028                          43289 48 +    110728 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCCCTT--TA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62908 42 -     65777 GCAATCATTC-AAGGCTACT-TTGCTCAC------TAATTACCTCACTT--A-
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14759511 47 +  30322482 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGCAATTAGCTCAC-T--TT
i Lemur_catta.scaffold_24                                C 0 I 1
s Leontocebus_fuscicollis.k141_2994775                        4204 48 -     13097 GCGATCATTC-AGGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           3958 48 +      5940 GCGATCATTC-AGGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3788 48 -      5717 GCGATCATTC-AGGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10160 48 -     11567 GCAATCATTC-AGGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11541 48 -     12945 GCAATCATTC-AGGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9022 47 +     29618 GCAATCATTC-AAGACTACT-TTGCTTACC-ATAGTAATTAGCTCAC-T--TA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9018 47 +     31569 GCAATCATTC-AAGACTACT-TTGTTTACC-ATAGTAATTAGCTCAC-T--TA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9028 47 +     24756 GCAATCATTC-AAGACTACT-TTGCTTACC-ATAGTAATTAGCTCAC-T--TA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9028 47 +     16388 GCAATCATTC-AAGACTACT-TTGTTTACC-ATAGTAATTAGCTCAC-T--TA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813526 43 -   3914936 GTAATCATTC-AAGACCACC-TTGCTCAC------TAATTAGCTCGCTT--AA
i Leptonychotes_weddellii.KB714746.1                     I 13 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17893 43 +     24238 GCAATCATTC-AATACTACT-TTGCTCGC------TAATTAGCTCACTT--AA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             335144 43 +    662738 GCAATCACTC-AAGATTATT-TTGCTCAC------TAATtaactcactt--aa
i Lipotes_vexillifer.KE559953.1                          C 0 I 6076
s Lophocebus_aterrimus.ctg367                               333921 37 -   1826925 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Lophocebus_aterrimus.ctg367                            I 13 C 0
s Loris_lydekkerianus.k141_2031736                           10608 48 +     19643 GCAGTCATTC-AAAACTGCC-TCACTTGCT-ACAGTAATTAGCTCACTT--AA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5044271 48 -   6120653 GCAGTCATTC-AAAACTGCC-TCACTTGCT-ACAGTAATTAGCTCACTT--AA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39081051 43 +  43346337 GCAATCATTC-CAGACTCCT-TGGCTCGC------TAATtaactcactt--aa
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614670 43 +  59628241 GCAATCATTC-AAGACTACC-TTGCTCAC------TAAttagctcactt--aa
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45315 37 -     61512 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Macaca_arctoides.k141_1757516                          I 13 C 0
s Macaca_assamensis.Contig5                                 372977 37 -  60120075 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Macaca_assamensis.Contig5                              I 13 C 0
s Macaca_cyclopis.k119_263443                                25240 37 +     30207 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Macaca_cyclopis.k119_263443                            I 13 C 0
s Macaca_fascicularis.k141_1397292                           22332 48 -     24934 GCAGTCATTC-AAGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25193 37 +     30527 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Macaca_fuscata.k119_546792                             I 13 C 0
s Macaca_leonina.k141_321385                                 36369 37 -     50087 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Macaca_leonina.k141_321385                             I 13 C 0
s Macaca_maura.k141_1103459                                  46113 37 +     51645 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Macaca_maura.k141_1103459                              I 13 C 0
s Macaca_mulatta.NC_041758.1                                415315 37 - 187317192 ------------AGACTGTT-TTGCTCACT-ACAGTAATtagctcactt--ta
i Macaca_mulatta.NC_041758.1                             I 13 C 0
s Macaca_nemestrina.KQ007038.1                              399546 37 +  25927173 ------------AGACTGTT-TTGCTCACT-ACAGTAATtagctcactt--ta
i Macaca_nemestrina.KQ007038.1                           I 13 C 0
s Macaca_nigra.k141_2818840                                  48718 37 -     62418 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Macaca_nigra.k141_2818840                              I 13 C 0
s Macaca_radiata.k141_2139468                                 1254 37 +     14901 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Macaca_radiata.k141_2139468                            I 13 C 0
s Macaca_siberu.k141_2185972                                 45190 37 +     59329 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Macaca_siberu.k141_2185972                             I 13 C 0
s Macaca_silenus.Contig273                                  271098 37 +    668171 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Macaca_silenus.Contig273                               I 13 C 0
s Macaca_thibetana.k99_503078                                 1363 48 +      1732 GCAGTCATTC-AAGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2896 37 +     17132 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Macaca_tonkeana.k141_339739                            I 13 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223215 43 -    270270 GCAATCATTC-AAGACTACT-TTCTTCAC------TAATTAGCTCACTT--AA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                        322385 37 +  24302211 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Mandrillus_leucophaeus.scaffold280                     I 13 C 0
s Mandrillus_sphinx.Contig270                               357216 37 -    752769 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Mandrillus_sphinx.Contig270                            I 13 C 0
s Manis_javanica.JSZB01003497.1                             673564 43 -    737560 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATTAgctcactt--aa
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                             220863 43 +    317179 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATTAgctcactt--aa
i Manis_pentadactyla.KN006162.1                          C 0 I 1
s Marmota_marmota.CZRN01000018.1                           7501083 42 +  40650429 GCAATCATTC-AAAACTACT-TTACTCAC------TAATTAGCTCACTT--G-
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150401 43 +    207569 GCAAACATTC-AAGATTACT-TTGCTCAC------TAATTAGCTCACTT--AA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_19308             26219 43 -     74585 GCAATCATTC-AAGACTTCC-TTGCTCAC------TAATTAGCTCACTT--AG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50192 42 -    140813 GCAATCATTC-AAGGCTACT-TTGCTCAC------TAATTAGCTTACTT--A-
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429291 42 +  29670104 GCAATCATTC-AAGGCCACT-TTGCTCAC------TAATTAgcttactt--a-
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     81443 43 +     93471 GCAATCACTC-AAGATTATT-TTGCTCAC------TAATTAACTCACTT--AA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 6061
s Mico_argentatus.k141_582562                                10327 48 +     17804 GCAATCATTC-AGGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10827 48 -     12984 GCAATCATTC-AGGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19143 48 -     26561 GCAATCATTC-AGGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984630 47 +  93316391 GCAATCATTC-AAGACTACT-TTGCTCACC-ATAGTAATTAgctcac-t--ta
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46181 42 +    145209 GCAATTATTC-AAGAGCACT-TGGCTCAC------TAATTAACTC-ATT--TA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185092 43 +    200668 GCCATCATTC-AAGACAACT-TTGCTCAC------TAATTAACTCACTA--AA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962492 42 +  27267610 GCAATCATTC-GAGGCTACT-TTGCTCAC------TAATTAGcttactt--a-
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363261 43 -   8254450 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATtaactcactt--aa
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42168 43 -     48117 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATTAACTCACTT--AA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22402 37 -     27822 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Miopithecus_ogouensis.k141_1534655                     I 13 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8537 43 +     27589 GTAATCATTC-AAGACCACC-TTGCTCAC------TAATTAGCTCACTT--AA
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 13 C 0
s Mirza_zaza.k141_766280                                     52426 47 -     62432 ACAATCATTC-AAGACTACT-TTGTTCACC-ATAGTAATTAGCTCAC-T--TA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   353542 43 +    437263 GCAATCACTC-AAGATTATT-TTGCTCAC------TAATTAACTCACTT--AA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 6064
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179315 43 +    366855 GCAATCATTC-AAGATTACT-TTGCTCAC------TAATTAACTCACTA--AA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25566 43 -     82753 AAAACCATTC-AAGACTACA-TTGCTCAC------TAATTAACTCACTT--AA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18551 43 -     63510 GCAATCATTC-ATGACTACC-TTTCTCTC------TAATTAGCTCCCTT--AA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39227 42 +     47283 GCTATCATTC-AAGACTACT-TTGCTCAC------TAATTAACTCACTT--A-
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593213 42 + 120012414 GCAATCATTC-AAGGCTACT-TTGCTCAC------TAATtagcttactt--a-
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687599 42 + 129401213 GCAATCATTC-AAGGCTACT-TTGCTCAC------TAATTAGCTTACtt--a-
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39496891 42 + 130317789 GCAATCATTC-AAGGCTACT-TTGCTCAC------TAATTAGCTTactt--a-
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83340 42 -     86153 GAAATCATTC-AAGACTGCT-CTACTTAC------TAATTAGCTTACTT--A-
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355156 43 +  14710649 GCAATCATTC-AAGACTACC-TTGCTCAC------TAAttagctcactt--aa
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63167 42 +     67721 GCCATCATTC-AAAACTACT-TAAGTCAC------TAATTAGCGCACTT--A-
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793516 42 +  10118263 GCAATCATTC-AGGACTACT-TTGCTCAC------TAATTAACTCACTT--A-
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387646 42 +   6019432 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATTAACTCACTT--A-
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383473 42 +   4330536 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATTAACTCACTT--A-
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2282 42 +     18357 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATTAACTCACTT--A-
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119789 43 +    130748 GCAATCATTC-AAGACTACT-TTACTCAC------TAATTAGCTCACTT--AA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946327 42 +   3037898 GCAGTCATCC-AAGACCACT-TTGCTCAC------TAATTAgcttactt--a-
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29040 37 +     34575 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Nasalis_larvatus.k141_1350636                          I 13 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1227712 43 -   7148211 GCAATCACTC-AAGATTATT-TTGCTCAC------TAATtaactcactt--aa
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 4577
s Noctilio_leporinus.NocLep_scaffold_7894                   128255 42 -    149072 GCAATCATTC-AAGACTATT-TTACTCAC------TAATTA-CTCACTA--AA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53793 37 -    132029 ------------AGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Nomascus_annamensis.k141_1771965                       I 13 C 0
s Nomascus_concolor.k141_735679                               9888 37 -     16345 ------------AGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Nomascus_concolor.k141_735679                          I 13 C 0
s Nomascus_gabriellae.k141_57920                             15773 37 +     22201 ------------AGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Nomascus_gabriellae.k141_57920                         I 13 C 0
s Nomascus_siki_b.tarseq_93                            8413994 37 -  22158432 ------------AGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Nomascus_siki_b.tarseq_93                          I 13 C 0
s Nomascus_siki_a.k141_941534                                  26171 37 -     54323 ------------AGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Nomascus_siki_a.k141_941534                              I 13 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198264 45 +   9404916 GCAATCATTC-AAGACTACC-TTGCTCAC------TAAttagctcacttaaaa
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636633 47 + 196305487 GCAGTCCTTC-AAAACTGGC-TCACTTGCT-ACAGTAATTAGCTCACTT--A-
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3387 47 -      3937 GCAGTCCTTC-AAAACTGGC-TCACTTGCT-ACAGTAATTAGCTCACTT--A-
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564892 47 - 199412804 GCAGTCCTTC-AAAACTGGC-TCACTTGCT-ACAGTAATTAGCTCACTT--A-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11055116 42 -  11899542 GTAATCATTC-AAAACTACT-TAACTCAC------TAATTAGctcactt--a-
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451733 43 +   2017862 GCAATCATTC-AAGACTACC-TTGCTCAC------TAAttagctcactt--aa
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Odocoileus_virginianus.KZ100018.1                         436337 43 -    630418 AAAATCATTC-AAGACTACA-TTGCTCAT------TAATTAactcactt--aa
i Odocoileus_virginianus.KZ100018.1                      C 0 I 1
s Okapia_johnstoni.LVCL01S0005463.1                          14328 43 +    150152 AAAATCATTC-AAGACTACA-TTGCTCAC------TAATtaactcactt--aa
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92848 42 -    140218 GCAATCATTC-AAGGCTACT-TTGCTCAC------TAATTAGCTTACTT--A-
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3731 42 -     41509 GCAATCATTC-AAGGCTACT-TTGCTCAC------TAATTAGCTAACCT--A-
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8096994 43 +  10937097 GCAATCACTC-AAGATTATT-TTGCTCAC------TAATtaactcactt--aa
i Orcinus_orca.KB316932.1                                C 0 I 5684
s Orycteropus_afer.OryAfe_flattened_line_171931              13858 43 -     14239 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATTAACTCACTT--TA
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103686 43 - 174332312 GCAATCATTC-AATACTACT-TGGCTCAC------TAATTAgctcactt--aa
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39310 43 +    559221 GCAATCATTC-AAGACTACC-TTGCTCAC------TAAttagctcactt--aa
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40194 48 -     51505 GCAGTCATTC-AAGACTGGC-TCACTTGCT-ACAGTAATTAGCTCACTT--AA
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             353196 48 +   1103335 GCAGTCATTC-AAGACTGGC-TCACTTGCT-ACAGTAATTagctcactt--aa
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404240 43 -  44047080 AAAATCATTC-AAGGCTACA-TTGCTCAC------TAATtaactcactt--aa
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4759 43 +     17875 AAAATCATTC-AAGGCTACA-TTGCTCAC------TAATTAACTCACTT--AA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001031.1                                 1270  5 -      1297 ------------AGAAC------------------------------------
i Pan_paniscus.AJFE02001031.1                            I 8 N 0
s Pan_troglodytes.CM009242.2                               1472887 37 - 189151597 ------------AGACTATT-TTACTCACT-ACAGTAATTagctcactt--ta
i Pan_troglodytes.CM009242.2                             I 130 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24540 42 -    230217 GCAATCATTC-AAGACTACC-TTTCTCAC------TAATTAGCTCACTT--A-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461866 42 -  18783137 GCAATCATTC-AAGACTACC-TTTCTCAC------TAATTAGCTCACTT--A-
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972525 42 +   8748460 GCAATCATTC-AAGACTACC-TTTCTCAC------TAATTAGCTCACTT--A-
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615768 43 +   2937107 AAAATCATTC-AAGACTACA-TTGCTCAC------TAATTAactcactt--aa
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                   243218 37 - 183742232 ------------AGACTGTT-TTGCTCACT-ACAGTAATTagctcactt--ta
i Papio_anubis.CM001495.2                                I 13 C 0
s Papio_cynocephalus.k141_1507553                             9680 37 +     21308 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Papio_cynocephalus.k141_1507553                        I 13 C 0
s Papio_hamadryas.Contig39                                  292253 37 -  20919399 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Papio_hamadryas.Contig39                               I 13 C 0
s Papio_kindae.k141_2214839                                  22328 37 -     27687 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Papio_kindae.k141_2214839                              I 13 C 0
s Papio_papio.k141_799093                                    15463 48 +     16796 GCAATCATTC-AAGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22274 48 -     23640 GCAATCATTC-AAGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15131 43 +     78924 GCAATCATTC-AAGACTACC-TTTCTCAC------TAATTAGCTCACTT--AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26392 48 +     31479 GCAGTTGTTT-AAGACAGGC-TCACTTGCT-ATAGTAATTAGCTCACTT--AA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18762 48 -     24908 GCAGTTATTT-AAGACAGGC-TCACTTGCT-ATAGTAATTAGCTCACTT--AA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1848 42 +      9367 GTAATCATTT-AGGACTACT-TTGCTCAC------TAATTAACTCACTT--A-
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246928 42 +  18517816 GCAATCATTC-AAGGCTACT-TTGCTCAC------TAATtagcttactt--a-
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32004 42 -     56120 GCAATCATTA-CAAACTACT-TAGCTCAC------TAATTAGCTCACTT--A-
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_46867              12838 43 -     15039 GCAATCACTC-AAGATTATT-TTGCTCAC------TAATTAACTCACTT--AA
i Phocoena_phocoena.PhoPho_flattened_line_46867          C 0 N 0
s Piliocolobus_badius.k141_2704958                            2498 37 +     55023 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Piliocolobus_badius.k141_2704958                       I 13 C 0
s Piliocolobus_gordonorum.k141_381342                         2048 37 -     89929 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Piliocolobus_gordonorum.k141_381342                    I 13 C 0
s Piliocolobus_kirkii.k141_1310104                            2637 37 +     40849 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Piliocolobus_kirkii.k141_1310104                       I 13 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254301 37 +  14605196 ------------AGACTGTT-TTGCTCACT-ACAGTAATTagctcactt--ta
i Piliocolobus_tephrosceles.PDMG02000141.1               I 13 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3820 42 +     22231 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATTAACTCACTT--A-
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64911 48 +    207309 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6003 48 -     25401 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31747 48 +     58159 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32023 48 +     63561 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31783 48 +     51148 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556753 48 -   4542175 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31767 48 +     51125 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_167872           4927 43 -      8168 GCAATCACTC-AAGATTATT-TTGCTCAC------TAATTAACTCATTT--AA
i Platanista_gangetica.PlaMin_flattened_line_167872      C 0 N 0
s Plecturocebus_bernhardi.k141_2549090                        8178 48 +     39866 GCAATCAGTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3262 48 -      9282 GCAATCACTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42666 48 -     87950 GCAATCACTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43060 48 -     88961 GCAATCACTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7758 48 -     39403 GCAATCACTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42709 48 +     87928 GCAATCACTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7755 48 -     60166 GCAATCACTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14692 48 -     67232 GCAATCACTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42608 48 -     90634 GCAATCACTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44075 48 +     89403 GCAATCACTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   177996 37 - 189387572 ------------AGACTATT-TTGCTCACT-ACAGTAATTagctcactt--ta
i Pongo_abelii.CM009266.2                                I 13 C 0
s Pongo_pygmaeus.ctg66                                      192813 37 -   9816681 ------------AGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Pongo_pygmaeus.ctg66                                   I 13 C 0
s Presbytis_comata.k141_1230337                              27623 37 +     69807 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Presbytis_comata.k141_1230337                          I 13 C 0
s Presbytis_mitrata.k141_584736                              44809 37 -     80239 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Presbytis_mitrata.k141_584736                          I 13 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                  228 43 +      7663 GCAATCACTC-AAGACTACT-CTGCTCAC------TAATTAACTCACTT--GA
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982659 47 +   4620579 GCAATCATTC-AGGACTACT-TTGCTCACT-ATAGCAATTagctcac-t--tt
i Prolemur_simus.MPIZ01000396.1                          C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                    1566167 48 -   2598838 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCactt--aa
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3805 48 -      7103 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCACTT--AA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4402 48 -     11706 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCACTT--AA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8140 48 -     30655 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCACTT--AA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34453 48 +     46564 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCACTT--AA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94732 48 -     98465 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCACTT--AA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8371 48 +     35169 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCACTT--AA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37535 42 +     52041 GCAATCATTC-AAGGCTGCT-TTGCTCAC------TAATTagcttactt--a-
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52209 43 -     66298 GCAATCATTC-AAGGCTACT-TTGCTCAC------TAATTAACtcactc--aa
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4723 43 -     18639 GCAATCATTC-AAGACTACC-TTGCTCAC------TAATTAGCTCACTT--AA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840899 43 -  28871421 GCAATCATTC-AAGACTACT-TTCCTCAC------TAATtagctcactt--aa
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537418 43 -   4952924 GCAATCATTC-AAGACTACT-TTCCTCAC------TAATtagctcactt--aa
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099183 42 +  38429054 GCAATCATTC-AAGACTACC-TTTCTCAC------TAATTAGCTCACTT--A-
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             26997 37 +     91421 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Pygathrix_cinerea.k141_1153803                         I 13 C 0
s Pygathrix_nigripes_b.ctg100                                  153489 37 -   7812017 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Pygathrix_nigripes_b.ctg100                               I 13 C 0
s Pygathrix_nigripes_a.k141_215492                              7864 37 +     72585 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Pygathrix_nigripes_a.k141_215492                         I 13 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53255 43 +     55069 AAAATCATTC-AAGACTACA-TTGCTCAT------TAATTAACTCACTT--AA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022819 42 -  90668790 GCAATCATTC-AAGGCTACT-TTGCTCAC------TAATTagcttactt--a-
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914795 43 +   3329780 GCAGTCATTC-GAGACTACT-TTGCTCAC------TAATTagctcactt--aa
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 1
s Rhinopithecus_bieti.k119_778604                             1570 37 +      7119 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Rhinopithecus_bieti.k119_778604                        I 13 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122178 37 + 195417433 ------------AGACTGTT-TTGCTCACT-ACAGTAATTagctcactt--ta
i Rhinopithecus_roxellana.NC_044550.1                    I 13 C 0
s Rhinopithecus_strykeri.ctg102                             236420 37 -   7961872 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Rhinopithecus_strykeri.ctg102                          I 13 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74832 43 -    116970 GCAATCATTC-AAGACTACT-TTCCTCAC------TAATTAGCTCACTT--GA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4067 48 +     27962 GCGATCATTC-AGGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             3962 48 +      6077 GCGATCATTC-AGGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4052 48 +      5971 GCGATCATTC-AGGACTCTT-TTGCTCACT-ACAGTAATTAGCTCACTT--GA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               3973 48 +      5932 GCGATCATTC-AGGACTCTT-TTGCTCACT-ACAGTAATTAGCTCACTT--GA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2315 48 -      4390 GCGATCATTC-AGGACTCTT-TTGCTCACT-ACAGTAATTAGCTCACTT--GA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391752 48 - 209938924 GCAATCATTC-AGGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3922 48 +      5979 GCGATCATTC-AGGACTCTT-TTGCTCACT-ACAGTAATTAGCTCACTT--GA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                491 48 -     22275 GCGATCATTC-AGGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7928 43 +     16473 CAAATCATTC-AAGACTACA-TTGCTCAC------AAATTAACTCACTT--AA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109089 48 + 121099817 GCAATCATTC-ATGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTG--TA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30656 48 -     47369 GCAATCATTC-ATGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTG--TA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31042 48 -     79414 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTG--TA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27733 48 -     34454 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTG--TA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15134 48 -     22428 GCAATCATTC-AAGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTG--TA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30288 48 -     47109 GCAATCATTC-ATGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTG--TA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238342 46 +   5703754 GCAATCATTC-AAGACTA---CTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7932 46 +     21866 GCAATCATTC-AAGACTA---CTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    115970 43 +    313613 GCAATCATTC-AAGACTACT-TTACTCAC------TAATTAGCTCACTT--AA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 1
s Semnopithecus_entellus.k141_158471                         25305 48 +     27374 GCAATCATTC-AAGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28830 37 +     58920 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Semnopithecus_hypoleucos.k141_1910531                  I 13 C 0
s Semnopithecus_johnii.k141_843753                           15326 37 -     45317 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Semnopithecus_johnii.k141_843753                       I 13 C 0
s Semnopithecus_priam.k141_714795                            22985 37 -     42441 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Semnopithecus_priam.k141_714795                        I 13 C 0
s Semnopithecus_schistaceus.k141_1432920                     25652 48 -     29113 GCAATCATTC-AAGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28737 37 -     48123 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Semnopithecus_vetulus.k141_244474                      I 26 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49305 42 +     77746 GCAATCATTC-AAGGCTACT-TTGCTCAC------TAATTAGCTTACCT--A-
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864254 43 -   1910179 GCAATCATTC-AAGACTACT-TTGCTCAC------TAATTAGCTCACTT--AA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671405 43 +  18376816 GCAATCATTC-AAAACTACT-TTGCTTAC------TAATTAgctcactt--aa
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1868442 42 +   3870691 GCAATCATTC-AAGACTACT-TTACTCAC------TAATTAGCTCACTT--G-
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6793 43 -     97271 GCAATCATTC-AAGACTACC-TTGCTCAG------TAATTAGCTCACTT--AA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124953 43 +    196729 GCAATCATTC-ATGACTACC-GTTCTCAC------TAATTAGCTCCCTT--AA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643843 43 +  69701581 GCAATCATTC-AAGACTACT-TTGCTCAC------TAAATagctcactt--aa
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391255 37 +   1523678 ------------AGACTATT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Symphalangus_syndactylus.tarseq_199                    I 13 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14384 43 +     22964 GCAATCATTC-AAGACTACT-CTGCTCAC------TAATTAACTCACAT--AC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2778 43 +      5583 GCAATCATTC-AAGACTACT-TTACTCGC------TAATTAGCTCACTT--AA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191687 43 +    199430 GCAATCATTC-AAGACCACT-TTGCTCAC------TAATTAGCTCACTT--AA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    105657 43 -    539355 GCAATCATTC-AAGACCACT-TTGCTCAC------TAATTAGCTCACTT--AA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 2
s Tarsius_lariang.k141_1733899                                 705 48 +      9917 GCAATCATTC-AAGGCCACT-TTGTTCACT-GCAGTAATTAGCTCACTT--AA
i Tarsius_lariang.k141_1733899                           C 0 I 1
s Tarsius_wallacei.k141_226975                                7495 48 +     20590 GCAATCATTC-AAGGCCACT-TTGTTCACT-GCAGTAATTAGCTCACTT--AA
i Tarsius_wallacei.k141_226975                           C 0 I 1
s Theropithecus_gelada.CM009954.1                           353204 37 - 186847797 ------------AGACTGTT-TTGCTCACT-ACAGTAATTagctcactt--ta
i Theropithecus_gelada.CM009954.1                        I 13 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24160 42 -     33621 GCAATCATTC-AAAACTACT-TAATTCAC------TAATTAGCTCACTT--A-
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19876 44 -     31044 ACAATCATTC-AAGACTATTTTTGCTTGC------TAATTAGCTCACTT--AT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480205 43 -    610378 GCCATCATTC-AAGACAACT-TTGCTCAC------TAATTAACTCACTA--AA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20862 37 +     26378 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Trachypithecus_auratus.k141_1189070                    I 13 C 0
s Trachypithecus_crepusculus.k141_539312                     33540 37 -     78344 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Trachypithecus_crepusculus.k141_539312                 I 13 C 0
s Trachypithecus_cristatus.k141_180416                       20187 37 +     25722 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Trachypithecus_cristatus.k141_180416                   I 13 C 0
s Trachypithecus_francoisi.k141_1453105                      28493 37 -     62838 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Trachypithecus_francoisi.k141_1453105                  I 13 C 0
s Trachypithecus_geei.k141_1001272                           28538 37 +     46913 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Trachypithecus_geei.k141_1001272                       I 13 C 0
s Trachypithecus_germaini.k141_57262                          9345 37 -     28527 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Trachypithecus_germaini.k141_57262                     I 13 C 0
s Trachypithecus_hatinhensis.k141_31479                      30429 37 -     64340 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Trachypithecus_hatinhensis.k141_31479                  I 13 C 0
s Trachypithecus_laotum.k141_928651                          28466 37 -     63452 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Trachypithecus_laotum.k141_928651                      I 13 C 0
s Trachypithecus_leucocephalus.k141_96450                     9912 37 +     22490 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Trachypithecus_leucocephalus.k141_96450                I 13 C 0
s Trachypithecus_melamera.k141_591572                         3326 48 -      6147 GCAATCATTC-AAGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10231 48 -     13050 GCAATCATTC-AAGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255482 37 -   6242583 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Trachypithecus_phayrei.ctg124                          I 13 C 0
s Trachypithecus_pileatus.k141_2622778                        1506 37 +     19340 ------------AGACTGTT-TTGCTCACT-ACAGTAATTAGCTCACTT--TA
i Trachypithecus_pileatus.k141_2622778                   I 13 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173541 43 -    200418 GCAATCATTC-AAGACTACG-TTGCTCAC------TAATTAACTCACTT--AA
i Tragulus_javanicus.TraJav_scaffold_3462                I 1 C 0
s Trichechus_manatus.JH594705.1                            6480518 43 -  10818551 GCAATCATTC-AAGACCACT-TTGCTCAC------TAATTAACTcactt--aa
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834189 43 -   4065304 GCAATCATTC-CAGACTACT-TTGCTTGC------TAATTagctcactt--aa
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8210 43 -     70247 GCAATCATTC-CAGACTACT-TTGCTTGC------TAATTAGCTCACTT--AA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17361739 43 -  33153633 GCAATCACTC-AAGATTATT-TTGCTCAC------TAATtaactcactt--aa
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 4047
s Uropsilus_gracilis.UroGra_scaffold_46687                    3710 43 -     21056 GCAATCATTC-AAGACTACT-TTACTCAC------TAATTAGCTCACTT--AA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181898 43 +   5085361 GCAATCATTC-AAGACTACC-TTGCTCAC------TAAttagctcactt--aa
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25308 47 -     30710 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCAC-T--TA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24215 47 -    147434 GCAATCATTC-AAGACTACT-TTGCTCACT-ATAGTAATTAGCTCAC-T--TA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76375 43 +   5488506 GCAATCATTC-AAGACTACT-TTGTGCGC------TAATTAGCTCacct--aa
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_12041                105032 43 -    112863 GCAATCATTC-AAGACTACC-TTGCTCAC------TAATTAGCTCACTT--AA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174229 42 -    224448 GCAATCATTC-AAGACTACT-TTACTCAC------TAATTAGCTCACTT--G-
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28928 43 -     86975 GCAATCATTC-AAGACTACC-TTGCTCAC------TAATTAGCTCACTT--AA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_501999                       700 40 -       833 GCAATCATTC-AA--TTACT-TTGCTCAC------TAATTAGCTCATTT--A-
i Zapus_hudsonius.ZapHud_scaffold_501999                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_572595            1146 43 +      1812 GCAATCACTC-AAGATTATT-TTGCTCTC------TAATTAACTCACTT--AA
i Ziphius_cavirostris.ZipCav_flattened_line_572595       C 0 N 0
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Ochotona_princeps.JH802162.1                             2556793 235 -   3988456 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Hipposideros_armiger.JXIK01000431.1                      1554070 2335 -   1711038 T

a score=0.000000
s hg38.chrUn_KI270755v1                                       5580 3 +     36723 A--A---A
s Acomys_cahirinus.AcoCah_scaffold_21377                     25242 2 +     63021 ---A---A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415427 3 +  29979442 a--a---a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215736 3 +    347723 a--a---a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18185 2 -     61208 ---G---A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47896 3 +     53615 A--A---A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43878 3 +     44087 A--A---A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16486 3 -     21945 A--A---A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18169 3 +     32033 A--A---A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72332 3 -     84148 A--A---C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44571 3 -     78289 A--A---A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44010 3 +     55831 A--A---C
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42460 3 -     64179 A--A---A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24094 3 -     24835 A--A---A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41085 3 +     45454 A--A---A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46734 3 +     70886 A--A---A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8907 3 +     30854 A--A---A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33041 3 +     42133 A--A---A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585416 3 +   2318259 a--a---a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177206 3 -    412891 A--A---A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 7
s Antilocapra_americana.AntAmePen_scaffold_21030             50524 1 -     68529 -------A
i Antilocapra_americana.AntAmePen_scaffold_21030         I 1 C 0
s Aotus_azarae.k141_887050                                    1288 3 +     17741 A--A---A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1913 3 -     15923 A--A---A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672195 3 +   5030052 a--a---a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2189 3 -     16391 A--A---A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1748 3 -     17186 A--A---A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16104 5 -     32367 ---AAAAA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19645 1 -     45910 A-------
i Arctocebus_calabarensis.k141_1364444                   C 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5481 2 -     15198 A--A----
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 2
s Ateles_geoffroyi_b.tarseq_1536                               274786 3 +  21539123 A--A---A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10952 3 +     48076 A--A---A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6089 3 -     28759 A--A---A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33643 3 +     44353 A--A---A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49012 3 -     71267 A--A---A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23072 3 -     33135 A--A---A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6319 3 +     11645 A--A---A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6327 3 -     19611 A--A---A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963566 3 -  23207421 a--a---a
i Balaenoptera_acutorostrata.KI537508.1                  I 6261 C 0
s Balaenoptera_bonaerensis.DF411050.1                           66 3 -     25979 a--a---a
i Balaenoptera_bonaerensis.DF411050.1                    N 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86424 3 +    124022 G--A---A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21957 3 +    288883 a--a---a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356351 1 +  48749331 -------a
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                      754913 3 +   1948126 a--a---a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545057 1 -  45695690 -------a
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               1530076 3 -   4408762 a--a---a
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7961 3 +     28062 A--A---A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43255 3 -     91139 A--A---A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20781 3 +     95584 A--A---A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20694 3 +    119600 A--A---A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10268 3 +     18648 A--A---A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9803 3 -     13885 T--A---A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1873 3 -      8861 A--A---A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454265 3 + 189096842 A--A---A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1788 3 +      8664 A--A---A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631085 1 +  17673402 -------a
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           4665371 1 +   7040546 -------a
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                 1209031 1 +   1652518 -------a
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           42505444 3 +  60362399 A--A---A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9080 3 -     23171 A--A---A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222423 3 +   9314153 a--a---a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615558 3 +  59632846 a--a---a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107139 3 -  63665305 a--a---a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409145 3 -  46296322 a--a---a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591419 3 +  44709034 a--a---a
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1630 1 -      1880 ---A----
i Capromys_pilorides.CapPil_scaffold_652123              C 0 I 1
s Carlito_syrichta.NW_007259797.1                           270527 3 +    496798 a--a---a
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                322 2 +      9923 A--A----
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 3
s Castor_canadensis.CasCan_scaffold_39952                    27764 2 -     39886 ---A---A
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     79620 3 -    217609 A--A---A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996478 3 +  23392119 ---A--GA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999920 3 +  23407841 ---A--GA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63001 3 -     66877 ---A--GA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5186 3 -     12580 A--A---A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43244 3 +     53515 A--A---A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371172 3 -  26074798 A--A---A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8061 3 -     34880 A--A---A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67156 3 -     89041 A--A---A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2491 3 -      5494 A--A---A
i Cephalopachus_bancanus.k141_1689090                    I 1 C 0
s Ceratotherium_simum.JH767749.1                          15492256 1 -  27778364 -------a
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19089 1 +     27315 -------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 1 C 0
s Cercocebus_atys.KQ010504.1                                141073 3 -   4669795 a--a---a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44815 3 +     47900 A--A---A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44639 3 -     44860 A--A---A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44628 3 -    148725 A--A---A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26815 3 -     40656 A--A---A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6781 3 +     20796 A--A---A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11898 3 -     17524 A--A---A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27620 3 -     34525 A--A---A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11402 3 -     25376 A--A---A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  363997 3 -  39242232 A--A---A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269714 3 +  21565898 A--A---A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32087 3 -     45857 A--A---A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26986 3 -     32606 A--A---A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3145 3 +      8499 A--A---A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25542 3 +     70610 A--A---A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22512 3 +     36323 A--A---A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12830 3 -     19938 A--A---A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30693 3 -     33796 A--A---A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5210 3 -     15404 A--A---A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9061 3 -     32913 A--A---A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19474 3 -     40346 A--A---A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19729 3 +    216457 A--A---A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19522 3 +     39636 A--A---A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238855 3 -   2543920 ---a--aa
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4117 3 +      5346 A--A---A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42592 3 -    112038 A--A---A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8163 3 +     34062 A--A---A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343402 3 +  18827391 A--A---A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9950 3 -     44032 A--A---A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304727 3 - 135778131 a--a---a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14870 3 +     15858 A--A---A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606445 3 -    839153 a--a---a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                867 3 +      2406 A--A---A
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409152 3 -   2368649 a--a---a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379028 3 - 200372422 A--A---A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2577 3 -     84244 A--A---A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807323 3 +  53390261 a--a---a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2837 1 -      8242 -------A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 1 I 3
s Cricetomys_gambianus.CriGam_scaffold_14425                 44383 2 -     83289 ---A---A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 1
s Cricetulus_griseus.LT883664.1                          213114947 2 - 224834208 ---A---A
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_77846               9536 1 +     12657 -------A
i Crocidura_indochinensis.CroInd_scaffold_77846          I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4413 3 +     87169 A--A---A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645076 2 -   1526836 ---G---A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18422 1 +     50838 ---A----
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 1
s Cuniculus_paca.CunPac_flattened_line_7025                   4401 3 +     36344 ---AA--A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28177 3 +     75252 ---A--GA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110180 3 -   2246927 A--A---A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292632 3 +  12879189 A--A---A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18631974 3 -  35494412 a--a---a
i Delphinapterus_leucas.KZ290073.1                       I 6132 C 0
s Desmodus_rotundus.KZ672366.1                              330522 3 -   2620052 a--a---a
i Desmodus_rotundus.KZ672366.1                           C 0 I 12
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664538 1 -   1390856 -------a
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139333 1 -    198055 -------A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98941 3 -    115145 ---AA--A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950563 1 -  37912305 -------A
i Dipodomys_ordii.KN672350.1                             I 4 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5497 1 -     10735 -------A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10437 3 +     14636 ---A--GA
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62855138 3 - 111700974 a--a---a
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6294 3 +     19438 a--a---a
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239785 3 -    607251 a--a---a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108802 3 -  10337057 a--a---a
i Elephantulus_edwardii.JH947257.1                       C 0 I 2
s Ellobius_lutescens.LOEQ01008920.1                          31095 2 +    110024 ---a---a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01026522.1                           13066 2 +     18970 ---a---a
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               24916165 3 +  41312741 a--a---a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12578955 3 +  14770903 A--A---C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041416 3 -   4378816 a--a---a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375354 3 +  39960074 a--a---a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             735 3 -      1194 a--a---a
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666122 1 +   7059049 -------A
i Erinaceus_europaeus.JH835339.1                         I 1 C 0
s Erythrocebus_patas.Contig38                               262930 3 +  21539334 A--A---A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71183 3 -    133382 a--a---a
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 6002 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202              727 3 -      1170 a--a---a
i Eubalaena_japonica.EubJap_flattened_line_247202        N 0 C 0
s Eulemur_albifrons.k141_51491                               14841 3 -     24895 A--A---A
i Eulemur_albifrons.k141_51491                           I 1 C 0
s Eulemur_collaris.k141_601111                               42550 3 -     70999 A--A---A
i Eulemur_collaris.k141_601111                           I 1 I 1
s Eulemur_coronatus.k141_384460                              86512 3 +    112731 A--A---A
i Eulemur_coronatus.k141_384460                          I 1 I 9
s Eulemur_flavifrons.k141_433119                             43081 3 +     68309 A--A---A
i Eulemur_flavifrons.k141_433119                         I 1 I 3
s Eulemur_fulvus.k141_636316                                 53407 3 -     65740 A--A---A
i Eulemur_fulvus.k141_636316                             I 1 I 1
s Eulemur_macaco.k141_1562045                                24036 3 -     75513 A--A---A
i Eulemur_macaco.k141_1562045                            I 1 I 3
s Eulemur_mongoz.k141_232305                                 48234 3 -     97555 A--A---A
i Eulemur_mongoz.k141_232305                             I 1 C 0
s Eulemur_rubriventer.k141_1423786                            4958 3 +     30972 A--A---A
i Eulemur_rubriventer.k141_1423786                       I 1 I 1
s Eulemur_rufus.k141_514691                                  42678 3 -     52037 A--A---A
i Eulemur_rufus.k141_514691                              I 1 I 1
s Eulemur_sanfordi.k141_1122526                              59080 3 -    111500 A--A---A
i Eulemur_sanfordi.k141_1122526                          I 1 I 2
s Fukomys_damarensis.KN121974.1                            2916478 3 -   3816255 ---a--aa
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     125080 3 -    137831 A--A---A
i Galago_moholi.ctg3793                                  C 0 I 1
s Galago_senegalensis.k141_991736                             8625 3 +     22493 A--A---A
i Galago_senegalensis.k141_991736                        C 0 I 1
s Galagoides_demidoff.k141_561628                            20697 3 -     32986 A--A---A
i Galagoides_demidoff.k141_561628                        C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_51812                1232 3 -     28519 A--A---A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91488 3 -     95226 a--a---a
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34556 4 -     36801 ---AAA-A
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5880 3 -      8343 A--A---A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254895 3 - 186649187 a--a---a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2051 4 -     78134 ---AAA-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14766 3 -     40692 A--A---A
i Hapalemur_alaotrensis.k141_330369                      I 1 C 0
s Hapalemur_gilberti.k141_646465                             36168 3 +     49394 A--A---A
i Hapalemur_gilberti.k141_646465                         I 1 C 0
s Hapalemur_griseus.k141_763500                              61036 3 -     66874 A--A---A
i Hapalemur_griseus.k141_763500                          I 1 C 0
s Hapalemur_meridionalis.k141_258450                          9910 3 -     42923 A--A---A
i Hapalemur_meridionalis.k141_258450                     I 1 C 0
s Hapalemur_occidentalis.k141_578367                         16910 3 -     53142 A--A---A
i Hapalemur_occidentalis.k141_578367                     I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30843 3 -    327341 A--A---A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9163 3 +     48891 A--A---A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932447 3 -  22651954 ---a--aa
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                 498 3 +      4291 A--A---A
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7687 2 -     36432 ---A---A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1127 1 -      2730 -------A
i Hipposideros_galeritus.HipGal_scaffold_164997          I 1 C 0
s Hoolock_leuconedys.ctg274                                    142904 3 -    630532 A--A---A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69759 3 +     83186 A--A---A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71913 3 +    143317 ---A--GA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5938 3 +     12352 A--A---A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13122 3 +     55766 A--A---A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052722 3 + 191637585 A--A---A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801600 3 +  11177569 A--A---A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4552 2 -    135385 ---A---A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386905 4 +   7955117 ---AAA-A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2466 3 +     11955 A--A---A
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10074 3 -     16823 a--a---a
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 6415 C 0
s Jaculus_jaculus.JH725527.1                               1239890 2 +   9596543 ---G---A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 71917 3 -     97402 A--A---A
i Kogia_breviceps.KogBre_flattened_line_3970             I 6018 C 0
s Lagothrix_lagothricha.k141_246028                          43337 3 +    110728 A--A---A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62950 3 -     65777 A--A---C
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14759559 3 +  30322482 A--A---A
i Lemur_catta.scaffold_24                                I 1 C 0
s Leontocebus_fuscicollis.k141_2994775                        4252 3 -     13097 A--A---A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4006 3 +      5940 A--A---A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3836 3 -      5717 A--A---A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10208 3 -     11567 T--A---A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11589 3 -     12945 T--A---A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9069 3 +     29618 A--A---T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9065 3 +     31569 A--A---T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9075 3 +     24756 A--A---T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9075 3 +     16388 A--A---T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813569 3 -   3914936 A--A---A
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lepus_americanus.LepAme_scaffold_56121                     17936 3 +     24238 A--A---A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341263 3 +    662738 a--a---a
i Lipotes_vexillifer.KE559953.1                          I 6076 C 0
s Lophocebus_aterrimus.ctg367                               333958 3 -   1826925 A--A---A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10656 3 +     19643 A--A---A
i Loris_lydekkerianus.k141_2031736                       C 0 I 2
s Loris_tardigradus.ctg83                                  5044319 3 -   6120653 A--A---A
i Loris_tardigradus.ctg83                                C 0 I 2
s Loxodonta_africana.GL010049.1                           39081094 3 +  43346337 a--a---a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614713 3 +  59628241 a--a---a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45352 3 -     61512 A--A---A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373014 3 -  60120075 A--A---A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25277 3 +     30207 A--A---A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           22380 3 -     24934 A--A---A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25230 3 +     30527 A--A---A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36406 3 -     50087 A--A---A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46150 3 +     51645 A--A---A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415352 3 - 187317192 a--a---a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399583 3 +  25927173 a--a---a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48755 3 -     62418 A--A---A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1291 3 +     14901 A--A---A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45227 3 +     59329 A--A---A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271135 3 +    668171 A--A---A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                 1411 3 +      1732 A--A---A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2933 3 +     17132 A--A---A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223259 1 -    270270 -------A
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                        322422 3 +  24302211 A--A---A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357253 3 -    752769 A--A---A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673608 1 -    737560 -------a
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                             220907 1 +    317179 -------a
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Marmota_marmota.CZRN01000018.1                           7501125 4 +  40650429 ---AAA-A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150445 1 +    207569 -------A
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26262 2 -     74585 A--A----
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 50234 1 -    140813 ---A----
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 3
s Mesocricetus_auratus.KB708134.1                         17429333 2 +  29670104 ---a---a
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_6114                     87547 1 +     93471 -------a
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 6061 C 0
s Mico_argentatus.k141_582562                                10375 3 +     17804 A--A---A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10875 3 -     12984 A--A---A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19191 3 -     26561 A--A---A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984677 2 +  93316391 a--a----
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46223 3 +    145209 A--A---A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185135 3 +    200668 A--A---A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 4
s Microtus_ochrogaster.CM001695.1                         15962534 2 +  27267610 ---a---a
i Microtus_ochrogaster.CM001695.1                        C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    6363304 3 -   8254450 a--a---a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42211 3 -     48117 A--A---A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22439 3 -     27822 A--A---A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8580 3 +     27589 A--A---A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 1
s Mirza_zaza.k141_766280                                     52473 3 -     62432 A--A---A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359649 3 +    437263 a--a---a
i Monodon_monoceros.MonMon_M_scaffold_103                I 6064 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179358 3 +    366855 A--A---A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_13123                  25609 3 -     82753 A--A---A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18594 3 -     63510 A--A---A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39269 3 +     47283 A--G---C
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593255 3 + 120012414 ---a--aa
i Mus_caroli.LT608237.1                                  C 0 I 2
s Mus_musculus.chr8                                       41687641 3 + 129401213 ---a--ca
i Mus_musculus.chr8                                      C 0 I 2
s Mus_spretus.CM004101.1                                  39496933 3 + 130317789 ---a--ca
i Mus_spretus.CM004101.1                                 C 0 I 3
s Muscardinus_avellanarius.MusAve_scaffold_12866             83382 4 -     86153 ---AAA-A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355199 3 +  14710649 a--a---a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63209 1 +     67721 ---A----
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 1
s Myotis_brandtii.KE162005.1                               9793558 3 +  10118263 C--A---C
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387688 3 +   6019432 A--A---C
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383515 3 +   4330536 C--A---C
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2324 3 +     18357 A--A---C
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119832 4 +    130748 AA-A---A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946369 2 +   3037898 ---a---a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29077 3 +     34575 A--A---A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232332 3 -   7148211 a--a---a
i Neophocaena_asiaeorientalis.KZ687982.1                 I 4577 I 1
s Noctilio_leporinus.NocLep_scaffold_7894                   128297 3 -    149072 A--A---A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 37
s Nomascus_annamensis.k141_1771965                           53830 3 -    132029 A--A---A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9925 3 -     16345 A--A---A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15810 3 +     22201 A--A---A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414031 3 -  22158432 A--A---A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26208 3 -     54323 A--A---A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198309 3 +   9404916 a--a---a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636680 2 + 196305487 ---A---A
i Nycticebus_bengalensis.LG01                            C 0 I 3
s Nycticebus_coucang.k141_3846325                             3434 2 -      3937 ---A---A
i Nycticebus_coucang.k141_3846325                        C 0 I 3
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564939 2 - 199412804 ---A---A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 3
s Octodon_degus.JH651603.1                                11055158 1 -  11899542 ---a----
i Octodon_degus.JH651603.1                               C 0 I 1
s Odobenus_rosmarus.KB229312.1                             1451777 2 +   2017862 ---a---a
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Odocoileus_virginianus.KZ100018.1                         436381 1 -    630418 -------a
i Odocoileus_virginianus.KZ100018.1                      I 1 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14371 3 +    150152 a--a---a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92890 2 -    140218 ---A---A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_28377                    3773 2 -     41509 ---A---A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 1
s Orcinus_orca.KB316932.1                                  8102721 3 +  10937097 a--a---a
i Orcinus_orca.KB316932.1                                I 5684 I 1
s Orycteropus_afer.OryAfe_flattened_line_171931              13901 3 -     14239 A--A---A
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103729 3 - 174332312 a--a---a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39353 3 +    559221 a--a---a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40242 3 -     51505 A--A---A
i Otolemur_crassicaudatus.k141_649260                    C 0 I 1
s Otolemur_garnettii.GL873799.1                             353244 4 +   1103335 a--a--aa
i Otolemur_garnettii.GL873799.1                          C 0 I 1
s Ovis_aries.CM001607.2                                   26404283 3 -  44047080 a--a---a
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4802 3 +     17875 A--A---A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472924 3 - 189151597 a--a---a
i Pan_troglodytes.CM009242.2                             C 0 I 52
s Pantholops_hodgsonii.KE114653.1                          1615811 3 +   2937107 a--a---a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243255 3 - 183742232 a--a---a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9717 3 +     21308 A--A---A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292290 3 -  20919399 A--A---A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22365 3 -     27687 A--A---A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15511 3 +     16796 A--A---A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22322 3 -     23640 A--A---A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15174 3 +     78924 A--A---A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1890 3 +      9367 ---TA--A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246970 2 +  18517816 ---a---a
i Peromyscus_maniculatus.KI615324.1                      C 0 I 3
s Petromus_typicus.PetTyp_scaffold_17301                     32046 1 -     56120 ---A----
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 1
s Perodicticus_ibeanus.k141_1921260                          26440 1 +     31479 A-------
i Perodicticus_ibeanus.k141_1921260                      C 0 I 3
s Perodicticus_potto.k141_1854441                            18810 1 -     24908 A-------
i Perodicticus_potto.k141_1854441                        C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159               4243 3 -     63832 a--a---a
i Phocoena_phocoena.PhoPho_flattened_line_24159          N 0 C 0
s Piliocolobus_badius.k141_2704958                            2535 3 +     55023 A--A---A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2085 3 -     89929 A--A---A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2674 3 +     40849 A--A---A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254338 3 +  14605196 a--a---a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3862 3 +     22231 A--A---C
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64959 3 +    207309 A--A---A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6051 3 -     25401 A--A---A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31795 3 +     58159 A--A---A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32071 3 +     63561 A--A---A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31831 3 +     51148 A--A---A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556801 3 -   4542175 A--A---A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31815 3 +     51125 A--A---A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1240 3 +     19503 A--A---A
i Platanista_gangetica.PlaMin_flattened_line_83166       N 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8226 3 +     39866 A--A---A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3310 3 -      9282 A--A---A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42714 3 -     87950 A--A---A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43108 3 -     88961 A--A---A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7806 3 -     39403 A--A---A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42757 3 +     87928 A--A---A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7803 3 -     60166 A--A---A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14740 3 -     67232 A--A---A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42656 3 -     90634 A--A---A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44123 3 +     89403 A--A---A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178033 3 - 189387572 a--a---a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192850 3 -   9816681 A--A---A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              27660 3 +     69807 A--A---A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44846 3 -     80239 A--A---A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                  271 3 +      7663 A--A---A
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982707 3 +   4620579 a--a---a
i Prolemur_simus.MPIZ01000396.1                          I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566215 3 -   2598838 a--a---a
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3853 3 -      7103 A--A---A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4450 3 -     11706 A--A---A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8188 3 -     30655 A--A---A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34501 3 +     46564 A--A---A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94780 3 -     98465 A--A---A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8419 3 +     35169 A--A---A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37577 1 +     52041 ---a----
i Psammomys_obesus.NESX01036366.1                        C 0 I 2
s Pteronotus_parnellii.KE847780.1                            52252 3 -     66298 a--a---a
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4766 3 -     18639 A--A---A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5840942 3 -  28871421 a--a---a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537461 3 -   4952924 a--a---a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27034 3 +     91421 A--A---A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153526 3 -   7812017 A--A---A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7901 3 +     72585 A--A---A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53298 3 +     55069 A--A---A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022861 2 -  90668790 ---a---a
i Rattus_norvegicus.chr16                                C 0 I 2
s Rhinolophus_sinicus.LVEH01000134.1                       2914839 1 +   3329780 -------a
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_778604                             1607 3 +      7119 A--A---A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122215 3 + 195417433 a--a---a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236457 3 -   7961872 A--A---A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74875 3 -    116970 A--A---A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4115 3 +     27962 A--A---A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4010 3 +      6077 A--A---A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4100 3 +      5971 A--A---A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4021 3 +      5932 A--A---A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2363 3 -      4390 A--A---A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391800 3 - 209938924 A--A---A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3970 3 +      5979 A--A---A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                539 3 -     22275 A--A---A
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7971 3 +     16473 A--A---A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109137 3 + 121099817 A--A---A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30704 3 -     47369 A--A---A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31090 3 -     79414 A--A---A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27781 3 -     34454 A--A---A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15182 3 -     22428 A--A---A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30336 3 -     47109 A--A---A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238388 3 +   5703754 A--A---A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7978 3 +     21866 A--A---A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116014 1 +    313613 -------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_158471                         25353 3 +     27374 A--A---A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28867 3 +     58920 A--A---A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15363 3 -     45317 A--A---A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23022 3 -     42441 A--A---A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25700 3 -     29113 A--A---A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28774 3 -     48123 A--A---A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49347 2 +     77746 ---A---A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126            1864297 3 -   1910179 A--A---T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671449 1 +  18376816 -------a
i Sorex_araneus.JH798187.1                               I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1868484 4 +   3870691 ---AAA-A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6836 3 -     97271 A--A---A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             124996 3 +    196729 A--A---A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643886 3 +  69701581 a--a---a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391292 3 +   1523678 A--A---A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14427 3 +     22964 A--A---A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2821 4 +      5583 AA-A---A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191732 1 +    199430 -------A
i Tapirus_indicus.TapInd_scaffold_7432                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105702 1 -    539355 -------A
i Tapirus_terrestris.TapTer_scaffold_755                 I 2 C 0
s Tarsius_lariang.k141_1733899                                 754 4 +      9917 A--A--TA
i Tarsius_lariang.k141_1733899                           I 1 C 0
s Tarsius_wallacei.k141_226975                                7544 4 +     20590 A--A--TA
i Tarsius_wallacei.k141_226975                           I 1 C 0
s Theropithecus_gelada.CM009954.1                           353241 3 - 186847797 a--a---a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24202 3 -     33621 ---AA--A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19920 3 -     31044 A--A---A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480248 3 -    610378 A--A---A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 8
s Trachypithecus_auratus.k141_1189070                        20899 3 +     26378 A--A---A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33577 3 -     78344 A--A---A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20224 3 +     25722 A--A---A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28530 3 -     62838 A--A---A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           28575 3 +     46913 A--A---A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9382 3 -     28527 A--A---A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30466 3 -     64340 A--A---A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28503 3 -     63452 A--A---A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9949 3 +     22490 A--A---A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3374 3 -      6147 A--A---A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10279 3 -     13050 A--A---A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255519 3 -   6242583 A--A---A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1543 3 +     19340 A--A---A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173584 3 -    200418 A--A---A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480561 3 -  10818551 a--a---a
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834232 3 -   4065304 a--a---a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8253 5 -     70247 AAAA---A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17365829 3 -  33153633 a--a---a
i Tursiops_truncatus.MRVK01000835.1                      I 4047 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3753 3 -     21056 A--A---A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181941 4 +   5085361 a--a--aa
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25355 3 -     30710 A--A---A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24262 3 -    147434 A--A---A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76419 1 +   5488506 -------a
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105075 3 -    112863 A--A---A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174271 4 -    224448 ---AA-GA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28972 1 -     86975 -------A
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                       740 2 -       833 ---G---A
i Zapus_hudsonius.ZapHud_scaffold_501999                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1122 1 +      2126 -------a
i Ziphius_cavirostris.ZipCav_flattened_line_504766       N 0 C 0
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Puma_concolor.QAVW01001104.1                            18099225 0 +  38429054 C
e Panthera_tigris.KE722367.1                               3972567 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18461908 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   24582 0 -    230217 C
e Ochotona_princeps.JH802162.1                             2556793 235 -   3988456 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Hipposideros_armiger.JXIK01000431.1                      1554070 2335 -   1711038 T
e Felis_nigripes.FelNig_flattened_line_31944                 27759 0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185116662 0 - 205367284 C
e Acinonyx_jubatus.LLWD01001279.1                           812967 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       5583 52 +     36723 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCCGGT-------------GAG----AACCGTT---A
s Acinonyx_jubatus.LLWD01001279.1                           812967 46 +   1699592 ----------------ATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACtgtt---a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25247 53 +     63021 A-----A-AT---TAAGCAACCC-TTCAA-AAGTGAGTAAAACA-G-A----ATCCGGT-------------GAG----AATCATT---A
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415430 52 +  29979442 a-----a--t---taaatgacct-tTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----Aaccatt---a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215739 55 +    347723 a-----a--t---gaaatgacct-TTCAA-AAGTGAGTAAAATA-G-A----AGCTGGT-------------AAG----AAccattaaat
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 25
s Allactaga_bullata.AllBul_scaffold_20030                    18187 52 -     61208 A-----A-AC---TAAATGACCT-TTCAA-AAGTGAATAAAACA-A-A----ATCT-CT-------------AAG----ACCCACT---T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47899 52 +     53615 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----AACTGGT-------------GAG----AACGGTT---A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43881 52 +     44087 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16489 52 -     21945 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18172 52 +     32033 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72335 52 -     84148 A-----A--T---GAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44574 52 -     78289 A-----A--T---GAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44013 52 +     55831 A-----A--T---GAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42463 52 -     64179 A-----A--T---GAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24097 52 -     24835 A-----A--T---GAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41088 52 +     45454 A-----A--T---GAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46737 52 +     70886 A-----A--T---GAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8910 52 +     30854 A-----A--T---GAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33044 52 +     42133 A-----A--T---GAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585419 52 +   2318259 a-----a--t---taaatgacct-TTCAA-AAATGAGTAAAACA-G-G----ATCTGTT-------------AGG----aaccatt---a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177216 52 -    412891 A-----A--T---TAAATGACCT-TTCAA-AAGTGAATGAAATA-G-A----ATCTCGA-------------AAG----AACCATT---A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 7 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50525 52 -     68529 A-----A--T---TAAATGACCT-TTCAA-AAATGAGTAAAATA-G-G----ATCTGTT-------------AGG----AACCATT---A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1291 52 +     17741 A-----A--T---TAGGTGACCT-TTCGA-AAGTGAGTACAACA-G-A----ATCTTGT-------------GAG----AACTGTT---A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1916 52 -     15923 A-----A--T---TAGGTGACCT-TTCGA-AAGTGAGTACAACA-G-A----ATCTTGT-------------GAG----AACTGTT---A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672198 52 +   5030052 a-----a--t---taggtgaCCT-TTCGA-AAGTGAGTACAACA-G-A----ATCTTGT-------------GAG----AACTGTT---A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2192 52 -     16391 A-----A--T---TAGGTGACTT-TTCGA-AAGTGAGTACAACA-G-A----ATCTTGT-------------GAG----AACTGTT---A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1751 52 -     17186 A-----A--T---TAGGTGACCT-TTTGA-AAGTGAGTACAACA-G-A----ATCTTGT-------------GAG----AACTGTT---A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16109 52 -     32367 A-----A--T---TAGATGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------AAG----AACCATT---A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19649 52 -     45910 A-----A--T---TAAGTGACCT-TTCAA-AAGAGAATAAAATA-G-A----ATCTGGT-------------ACA----AACTATT---A
i Arctocebus_calabarensis.k141_1364444                   I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5485 52 -     15198 A-----T--T---TAAATGACCT-TTCAA-AAGTGAGTGAAACA-G-A----ATCTGGA-------------AAG----AACCATT---C
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 2 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274789 52 +  21539123 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              10955 52 +     48076 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6092 52 -     28759 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33646 52 +     44353 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49015 52 -     71267 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23075 52 -     33135 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6322 57 +     11645 AAAAAAG--T---TAAATGACCT-TTCAA-AAATGAGTAAAACA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6330 57 -     19611 AAGAAAG--T---TAAATGACCT-TTCAA-AAATGAGTAAAACA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963569 52 -  23207421 a-----a--t---taaatgacct-tTCAT-AAATGAGTATAATA-G-G----ACCTGTT-------------AAG----Gaccatt---a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                           69 52 -     25979 a-----a--t---taaatgacct-tTCAT-AAATGAGTATAATA-G-G----ACCTGTT-------------AAG----Gaccatt---a
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86427 52 +    124022 A-----A--T---TAAATGACCT-TTCAA-AAATGAGTAAAACA-G-G----ATCTGTT-------------AGG----AACCATT---A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     21960 52 +    288883 a-----a--t---taaatgacct-TTCAA-AAATGAGTAAAACA-G-G----ATCTGTT-------------AGG----aaccatt---a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356352 52 +  48749331 a-----a--t---taaatgacct-TTCAA-AAATGAGTAAAACA-G-G----ATCTGTT-------------AGG----aaccatt---a
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754916 52 +   1948126 a-----a--t---taaatgacct-TTCAA-AAATGAGTAAAACA-G-G----ATCTGTT-------------AGG----aaccatt---a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545058 52 -  45695690 a-----a--t---taaatgacct-TTCAA-AAATGAGTAAAACA-G-G----ATCTGTT-------------AGG----aaccatt---a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530079 52 -   4408762 a-----a--t---taaatgacct-TTCAA-AAATGAGTAAAACA-G-G----ATCTGTT-------------AGG----aaccatt---a
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   7964 52 +     28062 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATTTGGT-------------GAG----AAGTGTT---A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43258 52 -     91139 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATTTGGT-------------GAG----AAGTGTT---A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20784 52 +     95584 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATTTGGT-------------GAG----AAGTGTT---A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20697 52 +    119600 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATTTGGT-------------GAG----AAGTGTT---A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10271 52 +     18648 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----GACTGTT---A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9806 52 -     13885 A-----A--G---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGC-------------GAG----GACTGTT---A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1876 52 -      8861 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----GACTGTT---A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454268 52 + 189096842 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----GACTGTT---A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1791 52 +      8664 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----GACTGTT---A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631086 52 +  17673402 a-----a--t---taaatcacct-ttcaa-aaatgagtaaaata-g-g----ATCTAGT-------------AAg----aaccatt---a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665372 52 +   7040546 a-----a--t---taaatcacct-ttcaa-aaatgagtaaaata-g-g----ATCTAGT-------------AAg----aaccatt---a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209032 52 +   1652518 a-----a--t---taaatcacct-ttcaa-aaatgagtaaaata-g-g----ATCTAGT-------------AAg----aaccatt---a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505447 53 +  60362399 A-----A-TT---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACCATT---A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9083 53 -     23171 A-----A-TT---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACCATT---A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222426 53 +   9314153 a-----a-tt---taaatgacct-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AAccatt---a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615561 53 +  59632846 a-----a-tt---taaatgacct-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AAccatt---a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107142 53 -  63665305 a-----a-tt---taaatgacct-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AAccatt---a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409148 52 -  46296322 a-----a--t---tgaatgacCT-TTCAA-AAATGAGTAAAACA-G-G----ATCTGTT-------------AGG----aaccatt---a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591422 52 +  44709034 a-----a--t---taaatgacct-TTCAA-AAATGAGTAAAACA-G-G----ATCTGTT-------------AGG----aaccatt---a
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1632 32 -      1880 A-----A--T---TAAATGACCT-TTCAA-AAGTGATCAAAAC--A--------------------------------------------
i Capromys_pilorides.CapPil_scaffold_652123              I 1 I 11
s Carlito_syrichta.NW_007259797.1                           270530 56 +    496798 a-----a--t---taaatgacct-TTCAA-AAGTGAGTGAAATA-G-AGTCTGTCTGGT-------------AAG----atccatt---a
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                327 52 +      9923 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTGAAATA-G-A----ATCTGGA-------------AAG----AACCATT---A
i Carollia_perspicillata.CarPer_scaffold_107871          I 3 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27767 48 -     39886 --------------AAATGACCT-TTCAA-AAGTGGGACAAATG-G-A----ATCTGAT-------------AAG----AAATATT---A
i Castor_canadensis.CasCan_scaffold_39952                I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79623 52 -    217609 A-----A--T---TCAATGACCT-TTCAA-AAATGAGTAAAATA-G-G----ATCTGGT-------------AAG----AACCACT---A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996481 45 +  23392119 A-----A--T---TAAATGACCt-ttcaa-aattgatcaaaat-gG-A----ATCTAGT-------------GAG----A----------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               4999923 45 +  23407841 A-----A--T---TAAATGACCt-ttcaa-aattgatcaaaat-gg-A----ATCTAGT-------------GAG----A----------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63004 45 -     66877 A-----A--T---TAAATGACCT-TTCAA-AATTGATCAAAAT-GG-A----ATCTAGT-------------GAG----A----------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5189 52 -     12580 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----GACTGTT---A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43247 52 +     53515 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----GACTGTT---A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371175 52 -  26074798 A-----A--T---TAGGTGACCT-TTCAA-ACGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8064 52 -     34880 A-----A--T---TAGGTGACCT-TTCAA-ACGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67159 52 -     89041 A-----A--T---TAGGTGACCT-TTCAA-ACGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2494 56 -      5494 A-----A--T---TAAGTGACCT-TTCAA-AAGTGAGTGAAATA-G-AGTCTGTCTGGT-------------AAG----AACCATT---A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492257 52 -  27778364 a-----a--t---taaatgacct-TTCAA-AAGTGAGTAAAATA-G-A----AACTGGT-------------AGg----aactatt---a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19090 52 +     27315 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----AACTGGT-------------AGG----AACTATT---A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141076 52 -   4669795 a-----a--a---taggtgaCCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44818 52 +     47900 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44642 52 -     44860 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44631 52 -    148725 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26818 52 -     40656 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACAGTT---A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6784 52 +     20796 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACAGTT---A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11901 52 -     17524 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27623 52 -     34525 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACAGTT---A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11405 52 -     25376 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364000 52 -  39242232 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACAGTT---A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269717 52 +  21565898 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32090 52 -     45857 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       26989 52 -     32606 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACAGTT---A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3148 52 +      8499 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25545 52 +     70610 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22515 52 +     36323 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12833 52 -     19938 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATG-G-A----ATCTGGT-------------AAG----GACCATT---G
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30696 56 -     33796 AAAAA-G--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AGTTATT---A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5213 56 -     15404 AAAAA-G--T---TAAATGACCT-TTCAA-AAGAGAGTAAAATA-G-A----ATCTGGT-------------AAG----AATTATT---A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9064 52 -     32913 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19477 52 -     40346 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19732 52 +    216457 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19525 52 +     39636 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238858 32 -   2543920 a-----a--t---taaatgacct-TTCAA-AAGTGATCAAAAT--A--------------------------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 11
s Chiropotes_albinasus.k141_1946120                           4120 52 +      5346 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-C-A----ATGTGCT-------------GAG----GACTGTT---A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42595 52 -    112038 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACCGTT---A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8166 52 +     34062 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACCGTT---A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343405 52 +  18827391 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                        9953 52 -     44032 A-----A--A---TAGGTCACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304730 52 - 135778131 a-----a--a---taggtgaCCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14873 52 +     15858 A-----A--T---TAAATGACCT-TTCGA-AAGTGAGTAGAATG-G-A----ATCCGGT-------------ATG----AGCCATT---A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606448 52 -    839153 a-----a--t---taaatgacct-TTCAA-AAGTGAGTAGAATG-G-A----ATCCGGT-------------ATg----agccatt---a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                870 53 +      2406 G-----A--T--TTAAATGATCT-TTCAA-AAGTGAATACAATA-G-A----ATCTGGC-------------TAT----ATATGTG---C
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409155 52 -   2368649 a-----a--a---taggtgaCCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379031 52 - 200372422 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2580 52 -     84244 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807326 53 +  53390261 a-----a--t---taagtgacct-TTCAA-AAGTGAGTAAAATA-GAG----ATCTGGT-------------AGG----aaccatt---a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2841 52 -      8242 --------------AAATGTCCC-TTCAA-AAGTGAATGAAATA-G-A----ATCTGGT-------------AAAAAAAAACCATT---A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 3 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44386 53 -     83289 A-----A-AT---TAAACAACCT-TTCAA-AAGTGAGTAAAACA-G-A----ACCTAGT-------------GAG----AATCATT---A
i Cricetomys_gambianus.CriGam_scaffold_14425             I 1 C 0
s Cricetulus_griseus.LT883664.1                          213114950 53 - 224834208 A-----A-AT---TAAGCAACCT-TTCAA-AAGTGAGTAAAACA-G-A----AGCTGGG-------------GAA----AATCATT---A
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9537 51 +     12657 A-----A--T---TAAAGGACCT-TTCAA-AAGTGAGTAAAATC-A-A----GCTTGAT-------------AAC----AAC-TTT---A
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4416 52 +     87169 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACCATT---A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645078 52 -   1526836 A-----A--T---TAACTGACCT-TTCAA-AAGTGATCAAAACA-G-A----GTCTGGT-------------AAG----TGCCATT---A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18424 32 +     50838 A-----A--T---TAAATGACCT-TTCAA-AAGTGATCAAAAC--A--------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 1 I 11
s Cuniculus_paca.CunPac_flattened_line_7025                   4404 44 +     36344 A-----A--T---TAAATGACCT-TTCAA-AAGCGATCAAAAT--G-A----GTCTAGT-------------AAG----A----------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28180 45 +     75252 A-----A--T---TAAATGACCT-TTCAA-AAGTGATCAAAAC-GG-A----GTCTAGT-------------AAG----A----------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110183 52 -   2246927 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATG-G-A----ATCTGGG-------------AAG----Gaccaat---g
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292635 52 +  12879189 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTAACGTA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18631977 52 -  35494412 a-----a--t---taaatgacct-ttcaa-aaatgagtaaaata-a-g----atCTCTT-------------AAG----GACCATT---A
i Delphinapterus_leucas.KZ290073.1                       C 0 I 1
s Desmodus_rotundus.KZ672366.1                              330537 52 -   2620052 a-----t--t---taaatgaCCT-TTCAA-AAGTGAGTGAAATA-G-A----GTCTGGA-------------AAG----AACcatt---a
i Desmodus_rotundus.KZ672366.1                           I 12 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664539 52 -   1390856 a-----a--t---taaatgacct-TTCAA-AAGTGAGTAAAATA-G-A----AACTGGT-------------AGg----aactatt---a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139334 52 -    198055 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----AACTGGT-------------AGG----AACTATT---A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98944 32 -    115145 A-----A--T---TAAATGACTT-TTTAA-AAGTGATCAAAAT--A--------------------------------------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 11
s Dipodomys_ordii.KN672350.1                              18950564 47 -  37912305 C-----A--A---TAAATGACCT-CTcaa-aag----caag-aa-g-a----gtctggt-------------AAG----AGCtatt---g
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5498 47 -     10735 C-----A--A---TAAATGACCT-CTCAA-AAG----CAAG-AA-G-A----GTCTGGT-------------AAG----AGCTATT---G
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10440 45 +     14636 A-----A--T---TAAATGACCT-TTCAA-AATTGATCAAACT-GG-A----GTCTAGT-------------AAC----A----------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62855141 65 - 111700974 a-----a--t---taaatagcct-ttcaa-aagtgaacaaaaca-g-a----aTCTTGGAAGAacccttaaatat----atatatg---t
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6297 48 +     19438 a-----a--t-------taacct-ttcaA-AAGTGAGTGAAATG-G-A----ATCTGGT-------------AAG----Aaccatc---a
i Eidolon_helvum.AWHC01266696.1                          C 0 I 18
s Elaphurus_davidianus.JRFZ01104969.1                       239788 52 -    607251 a-----a--t---taaatgacct-ttcaa-aaatgagtaaaata-g-g----ATCTGTT-------------AGG----aaccatt---a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108807 47 -  10337057 --------------aaatgacct-ttcaa-aagtaaaatgaaCA-G-A----ATCTGGT-------------AAG----AATCATT----
i Elephantulus_edwardii.JH947257.1                       I 2 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31098 53 +    110024 a-----aa-t---taagcaaccT-TTCAA-AAGTGAGTAAAACT-G-A----AGCTGGT-------------GAA----AATCATT---A
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01026522.1                           13069 53 +     18970 a-----aa-t---taagcaaccT-TTCAA-AAGTGACTAAAACT-G-A----AGCTGGT-------------GAA----AATCATT---A
i Ellobius_talpinus.LOJH01026522.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               24916168 55 +  41312741 a-----a--t---taaatgacct-tTCAA-AAGTGAGTAAAATA-G-A----AGCCGGT-------------AAG----aaccattaaat
i Enhydra_lutris.KZ291758.1                              C 0 I 10
s Eptesicus_fuscus.JH977646.1                             12578958 52 +  14770903 A-----A--T---TAAATGCCCT-TTCAA-AAGTGAGTTATATA-G-A----ATCTGGT-------------AAG----AACcgct---a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041419 52 -   4378816 a-----a--t---taaatgacct-TTCAA-AAGTGAGTAAAATA-G-A----AACTGGT-------------AAG----AACtatt---a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375357 52 +  39960074 a-----a--t---taaatgacct-TTCAA-AAGTGAGTAAAATA-G-A----AACTGGT-------------AAG----AACTATT---A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             738 52 -      1194 a-----a--t---taaatgacct-TTCAA-AAGTGAGTAAAATA-G-A----AACTGGT-------------AAG----AACTATT---A
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666123 52 +   7059049 A-----G--T---TAAATCACCT-TTCAA-AAGAGAGTAAAATA-G-A----ATCTTTT-------------AAG----Aactatt---a
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262933 52 +  21539334 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71186 52 -    133382 a-----a--T---TAAATGACCT-TTCAA-AAATGAGTATAATA-G-G----ATCTGTT-------------AAG----GACCATT---A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202              730 52 -      1170 a-----a--T---TAAATGACCT-TTCAA-AAATGAGTATAATA-G-G----ATCTGTT-------------AAG----GACCATT---A
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               14844 56 -     24895 AAAAA-G--C---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42554 56 -     70999 AAAAA-G--C---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Eulemur_collaris.k141_601111                           I 1 C 0
s Eulemur_coronatus.k141_384460                              86524 56 +    112731 AAAAA-G--C---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Eulemur_coronatus.k141_384460                          I 9 C 0
s Eulemur_flavifrons.k141_433119                             43087 56 +     68309 AAAAA-G--C---TAAATGACCT-TTCCA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Eulemur_flavifrons.k141_433119                         I 3 C 0
s Eulemur_fulvus.k141_636316                                 53411 56 -     65740 AAAAA-G--C---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Eulemur_fulvus.k141_636316                             I 1 C 0
s Eulemur_macaco.k141_1562045                                24042 57 -     75513 AAAAAAG--C---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Eulemur_macaco.k141_1562045                            I 3 C 0
s Eulemur_mongoz.k141_232305                                 48237 57 -     97555 AAAAAAG--C---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            4962 56 +     30972 AAAAA-G--C---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---G
i Eulemur_rubriventer.k141_1423786                       I 1 C 0
s Eulemur_rufus.k141_514691                                  42682 56 -     52037 AAAAA-G--C---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Eulemur_rufus.k141_514691                              I 1 C 0
s Eulemur_sanfordi.k141_1122526                              59085 56 -    111500 AAAAA-G--C---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Eulemur_sanfordi.k141_1122526                          I 2 C 0
s Felis_catus.CM001381.2                                 186246876 46 - 206538554 ----------------ATGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------AAG----AACTGTT---a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116662 46 - 205367284 ----------------ATGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------AAG----AACTGTT---a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27759 46 -     30238 ----------------ATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTGTT---A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916481 45 -   3816255 a-----a--t---taaataacct-tTCAA-AAGTGGTCAAAACA-G-A----CTCCagt-------------aag----a----------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     125084 53 -    137831 AA----A--T---TAAATGACCT-TTCAA-AAGAGAATAAAATA-G-A----ATCTGGT-------------ATA----AACTATT---A
i Galago_moholi.ctg3793                                  I 1 C 0
s Galago_senegalensis.k141_991736                             8629 53 +     22493 AA----A--T---TAAATGACCT-TTCAA-AAGAGAATAAAATA-G-A----ATCTGGT-------------ATA----AACTATT---A
i Galago_senegalensis.k141_991736                        I 1 C 0
s Galagoides_demidoff.k141_561628                            20701 52 -     32986 A-----A--T---TAAATGACCT-TTCAA-AAGAGAATAAAATA-G-A----ATCTGGT-------------ACA----AAGTATT---A
i Galagoides_demidoff.k141_561628                        I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1235 52 -     28519 A-----A--T---TAAATGACCT-TTAAA-AAGTGAGTAAAATA-G-A----ATATGGC-------------AGG----AATCATT---A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91491 52 -     95226 a-----a--t---taaatgacct-ttcaa-aaatgagtaaaata-g-g----ATCTGTT-------------AGG----aaccatt---a
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34560 32 -     36801 A-----A--T---TAAGTGACCT-TTCAA-AAGCGAGTAAAACA----------------------------------------------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 16
s Gorilla_beringei.k141_3358147                               5883 52 -      8343 A-----A--T---TAGGTGATCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACCGTT---A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254898 52 - 186649187 a-----a--t---taggtgaCCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2055 32 -     78134 A-----A--T---TAAATGACCT-TTCAA-AAGTGAATAAAACA----------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 16
s Hapalemur_alaotrensis.k141_330369                          14769 56 -     40692 AAAAA-G--C---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AAATATT---A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36171 56 +     49394 AAAAA-G--C---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AAATATT---A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61039 56 -     66874 AAAAA-G--C---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AAATATT---A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9913 56 -     42923 AAAAA-G--C---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AAATATT---A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16913 56 -     53142 AAAAA-G--C---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AAATATT---A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30846 52 -    327341 A-----A--T---TAAATGACCT-TTCAA-AAGCGAGTAAAATA-G-A----ATCTGGT-------------AAG----AATCGTT---A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9166 52 +     48891 A-----A--T---TAAATGACCT-TTCAA-AAATGAGTAAAACA-G-G----ATCTGTT-------------AGG----AACCATT---A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932450 45 -  22651954 a-----a--t---taaataacct-tTCAA-AAGTGGTCAAAACA-G-A----ATCtagt-------------aag----a----------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                 501 53 +      4291 A-----A--T--TTAAATGACCT-TTCAA-AAGTGAATAATACA-G-A----AACTGGG-------------AAG----AACCATT---A
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7689 52 -     36432 A-----A--T---TAAATGACCT-TTCAA-AAATGAGTAAAATA-G-G----ATCTGTT-------------AAG----AACCATT---A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1128 52 -      2730 A-----A--A---AAAAAGACCT-TTCAA-AAGTGAGTGAAACA-G-A----ATCTGGT-------------AAG----AACCATT---A
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 4
s Hoolock_leuconedys.ctg274                                    142907 52 -    630532 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69762 51 +     83186 A-----A--T---TAAACGACCT-TTCAA-AAGTAAGTAAAATA-G-A----ATCTG-T-------------AAG----AACCATT---A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71916 45 +    143317 A-----A--T---TAAATGACCT-TTCAA-AATTGATCAAAAT-GA-A----GTCTAGT-------------AAG----A----------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               5941 52 +     12352 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACTATT---A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13125 52 +     55766 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052725 52 + 191637585 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----CTCTGGT-------------GAG----AACTGTT---A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801603 52 +  11177569 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----CTCTGGT-------------GAG----AACTGTT---A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4554 52 -    135385 A-----A--T---TAAATGACCT-TTCAA-AAGTGATCAAAACA-G-A----ATCAAGT-------------AAG----AAATAGT---A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 3
s Ictidomys_tridecemlineatus.JH393364.1                     386909 52 +   7955117 A-----A--T---TAGATGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCCGGT-------------AAa----aaccatt---a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2469 53 +     11955 AA----G--T---TAAATGACCT-TTCAG-AAGTGAGTAAAATA-G-A----ATCCGGT-------------AAG----AACTATT---A
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10077 52 -     16823 a-----a--T---TAAATGACCT-TTCAA-AAATGAGTACAATA-G-G----ATCTGTT-------------AAG----GACCATT---A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1239892 53 +   9596543 A-----A-AT---TAAATTACCT-TTCAA-Aagtgaataaaaca-a-a----atcttgt-------------aAA----ACCCGcc---t
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 71920 52 -     97402 A-----A--T---TAAATGACCT-TTCAG-AAATGAGTAAAATA-G-G----ATCTGTT-------------AAG----GACCATT---A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43340 52 +    110728 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    62953 52 -     65777 A-----A--T---TAAATGCCCT-TTCAA-AAGCCAGTTCAATA-G-G----AGCTGGC-------------AAG----AGCCACT---A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14759562 56 +  30322482 AAAAA-G--C---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AAATATT---A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4255 52 -     13097 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATGTGGT-------------GAG----GACTATT---A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4009 52 +      5940 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATGTGGT-------------GAG----GACTATT---A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3839 52 -      5717 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATGTGGT-------------GAG----GACTATT---A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10211 52 -     11567 A-----G--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACAGTT---A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11592 52 -     12945 A-----G--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACAGTT---A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9072 56 +     29618 AAAAA-G--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9068 56 +     31569 AAAAA-G--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9078 56 +     24756 AAAAA-G--T---TAAATGACCT-TTCAA-AAGTGAGTAAGATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9078 56 +     16388 AAAAA-G--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813573 42 -   3914936 ----------------ATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGt-------------aag----aa----t---g
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17939 50 +     24238 A-----T--T---TAAATGACCT-TTCAA-AATTGAGTAAATCA-C-A----ACCTGGT-------------AAG----AAATAT-----
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341266 52 +    662738 a-----a--t---taaatgacct-ttcaa-aaatgagtaaaata-g-g----ATCTCTT-------------AAG----GACCATT---G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               333961 52 -   1826925 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10661 48 +     19643 --------------AAATGACCT-TTTGA-AAGAGAATAAAATA-G-A----ATCTGGC-------------ACA----AACTATT---A
i Loris_lydekkerianus.k141_2031736                       I 2 C 0
s Loris_tardigradus.ctg83                                  5044324 48 -   6120653 --------------AAATGACCT-TTTGA-AAGAGAATAAAATA-G-A----ATCTGGC-------------ACA----AACTATT---A
i Loris_tardigradus.ctg83                                I 2 C 0
s Loxodonta_africana.GL010049.1                           39081097 53 +  43346337 a-----a--t--ttaaatgacct-TTCAA-AAGTGAATAAAATA-G-A----ATCTTGT-------------AAG----AACCATT---A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614716 53 +  59628241 a-----a-tt---taaatgacct-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AAccatt---a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45355 52 -     61512 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373017 52 -  60120075 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25280 52 +     30207 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           22383 52 -     24934 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25233 52 +     30527 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36409 52 -     50087 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46153 52 +     51645 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415355 52 - 187317192 a-----a--a---taggtgaCCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399586 52 +  25927173 a-----a--a---taggtgaCCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48758 52 -     62418 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1294 52 +     14901 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45230 52 +     59329 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271138 52 +    668171 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                 1414 52 +      1732 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2936 52 +     17132 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223260 52 -    270270 A-----A--T---TAAATAACCT-TTCAA-AAGTGAGTGAAATG-A-A----ATCTGGC-------------AAG----AACCATC---A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 44
s Mandrillus_leucophaeus.scaffold280                        322425 52 +  24302211 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357256 52 -    752769 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673609 52 -    737560 a-----a--t---taaatgacct-CTCAA-AAGTGAGTAAAGTA-G-A----ATCTggt-------------aaa----aactatt---a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220908 49 +    317179 a-----a--t---taaatgacct-CTCAA-AAGTGAGTAAAGTA-G-A----ATCTGGT-------------A-------ACtact---a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501129 52 +  40650429 A-----A--T---TAGATGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCCGGT-------------AAG----Aaccatt---a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150446 53 +    207569 AA----A--T---TAAATTACCT-TTCAA-AAGTGAGTGAAATA-G-A----AGCTGGT-------------AAG----AACCGTT---A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26265 55 -     74585 A-----A--T---TAAATGACCT-TTCAA-AAATGAGTAAAATA-G-A----AGCCGGT-------------AAG----AACCATtaaat
i Mellivora_capensis.MelCap_flattened_line_19308         I 1 I 25
s Meriones_unguiculatus.MerUng_scaffold_7390                 50238 53 -    140813 A-----A-AT---TAAACAACCT-TTCAA-AAGTGAGTAAAGCA-G-A----ATCCAGT-------------GAG----AATCATT---A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 3 C 0
s Mesocricetus_auratus.KB708134.1                         17429336 53 +  29670104 a-----aa-t---taaacaacct-TTCAA-AAGTGAGTAAAACA-G-A----AGCCAGT-------------GAA----AATCATT---A
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87548 52 +     93471 a-----a--T---TAAATGACCT-TTCAA-AAATGAGTAAAATA-G-G----ATCTGTT-------------AAG----GACCATT---A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10378 52 +     17804 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----GACTGTT---A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10878 52 -     12984 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----GACTGTT---A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19194 52 -     26561 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----GACTGTT---A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984679 56 +  93316391 a-aaaag--t---taaatgaccT-TTCAA-AAGTGACTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46226 58 +    145209 A-----A--T---TAAATAACCT-TTCAA-AAGTGAACAAAACA-G-A----ATCTTGGAAGAACTCTTAAGTAT----A----------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_2233                185142 52 +    200668 A-----A--T---TAAATGACCT-TTCAA-AAGTGAATGAAATA-G-A----ATCTGGA-------------AAA----AAACATT---A
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 4 C 0
s Microtus_ochrogaster.CM001695.1                         15962537 53 +  27267610 a-----aa-t---gaagcaaccT-TTCAA-AAGTGAGTAAAATT-G-A----AGCTGGT-------------GAA----AATCATT---A
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363307 52 -   8254450 a-----a--t---taaatgacct-tTCAA-AAGTGAGTGAAATA-G-A----ATCTGGT-------------AAG----Aaccatt---a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42214 52 -     48117 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTGAAATA-G-A----ATCTGGT-------------AAG----AACCATT---A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22442 52 -     27822 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAGAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8584 42 +     27589 ----------------ATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AA----T---A
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 1 C 0
s Mirza_zaza.k141_766280                                     52476 56 -     62432 AAAAA-G--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----AGCTGGT-------------AAG----AACTATT---A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359652 52 +    437263 a-----a--T---TAAATGACCT-TTCAA-AAATGAGTAAAATA-G-G----ATCTCTT-------------AAG----GACCATT---A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179362 53 +    366855 G-----A--T---TAAATGGCCTTTTCAA-AGGTGAGTGAAATA-G-A----ACCTGGA-------------AAG----AACCATT---A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25612 52 -     82753 A-----A--T---TAAATGACCT-TTCAA-AAATGAGTAAAATA-G-G----ATATGTT-------------AGG----AACCATT---A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18597 52 -     63510 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGA-------------AAG----AATCGTT---A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39272 51 +     47283 A-----A--T---TAAATGCCCT-TTCAA-AAGTGAGTTGAATA-G-A----ACCTGG--------------AAG----AAATGCT---A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593260 53 + 120012414 a-----aa-t---taaacagtct-TTCAA-AAGTGAATAAAACA-G-A----ATCCAGT-------------GAG----AAtcatt---a
i Mus_caroli.LT608237.1                                  I 2 C 0
s Mus_musculus.chr8                                       41687646 53 + 129401213 a-----aa-t---taaacagcct-ttcaa-aaatgaataaaaca-g-a----atCCAGT-------------GAG----AATCATT---A
i Mus_musculus.chr8                                      I 2 C 0
s Mus_spretus.CM004101.1                                  39496939 53 + 130317789 a-----aa-t---taaacagcct-ttcaa-aaatgaataaaaca-g-a----atcCAGT-------------GAG----AATCATT---A
i Mus_spretus.CM004101.1                                 I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83386 32 -     86153 A-----A--A---TGAATGACCT-TTCAA-AGGTGAGTAAAGCA----------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 16
s Mustela_putorius.JH418006.1                             14355202 55 +  14710649 a-----a--t---taaatgacct-tTCAA-AAGTGAGTAAAATA-G-A----AGCCAGT-------------AAG----aaccattaaat
i Mustela_putorius.JH418006.1                            C 0 I 8
s Myocastor_coypus.MyoCoy_scaffold_15261                     63211 32 +     67721 A-----A--T---TAAATGACCT-TCCAA-AAGTGATCAAAAC--A--------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 1 I 11
s Myotis_brandtii.KE162005.1                               9793561 52 +  10118263 A-----A--T---TAAATGCCCT-TTCAA-AAGTGAGTTAAATA-G-A----ACCTGGT-------------AAG----AACcgct---a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387691 52 +   6019432 A-----A--T---TAAATGCCCT-TTCAA-AAGTGAGTTAAATA-G-A----ACCTGGT-------------AAG----AACcgct---a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383518 52 +   4330536 A-----A--T---TAAATGCTCT-TTCAA-AAGTGAGTTAAATA-G-A----ACCTGGT-------------AAG----AACcgct---a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2327 52 +     18357 A-----A--T---TAAATGCCCT-TTCAA-AAGTGAGTTAAATA-G-A----ACCTGGT-------------AAG----AACCGCT---A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119836 52 +    130748 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGAAATATA-G-A----ATCTGGT-------------ATG----AGCCATT---A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946371 53 +   3037898 a-----aa-t---taaacaacct-TTCAA-AAGTGAGTAAAACA-G-A----ACCTGGT-------------GAG----AATCATT---G
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29080 52 +     34575 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAACTA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232336 46 -   7148211 ----------------atgacct-ttcaa-aaatgagtaaaata-g-g----ATCTCTT-------------AAG----GACCATT---A
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 I 1
s Noctilio_leporinus.NocLep_scaffold_7894                   128337 53 -    149072 A-----A--A---GAAGTGACTT-TTCAAAAAGTAAGTGAAATA-G-A----ATCTGGT-------------AAG----AACCATT---A
i Noctilio_leporinus.NocLep_scaffold_7894                I 37 C 0
s Nomascus_annamensis.k141_1771965                           53833 52 -    132029 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9928 52 -     16345 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15813 52 +     22201 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414034 52 -  22158432 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26211 52 -     54323 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198312 53 +   9404916 a-----a-tt---taaatgacct-TTCAA-AAGTGAGTAAAATA-T-A----ATCTGGT-------------AAG----AAccatt---a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636685 52 + 196305487 A-----A--T---TAAATGACCT-TTTGA-AAGAGAATAAAATA-G-A----ATCTGGT-------------ACA----AACTATT---A
i Nycticebus_bengalensis.LG01                            I 3 C 0
s Nycticebus_coucang.k141_3846325                             3439 52 -      3937 A-----A--T---TAAATGACCT-TTTGA-AAGAGAATAAAATA-G-A----ATCTGGT-------------ACA----AACTATT---A
i Nycticebus_coucang.k141_3846325                        I 3 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564944 52 - 199412804 A-----A--T---TAAATGACCT-TTTGA-AAGAGAATAAAATA-G-A----ATCTGGT-------------ACA----AACTATT---A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 3 C 0
s Ochotona_princeps.JH802162.1                             2557028 20 -   3988456 ---------------------------------------------N-N----NNNNNNN-------------NNN----NNNNNNN---N
i Ochotona_princeps.JH802162.1                           I 235 C 0
s Octodon_degus.JH651603.1                                11055160 32 -  11899542 a-----a--t---taaatgacct-ttcaa-aattgatcaaaac--a--------------------------------------------
i Octodon_degus.JH651603.1                               I 1 I 11
s Odobenus_rosmarus.KB229312.1                             1451779 48 +   2017862 a-----a--t---taaatgacct-tTCAA-AAGTGAGTAAAATA-G-A----ATCtggt-------------aag----aa----t---a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436382 52 -    630418 a-----a--t---taaatgacct-ttcaa-aaattagtaaaata-g-G----ATCTGTT-------------AGG----aaccatt---a
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14374 52 +    150152 a-----a--t---taaatgacct-ttcaa-aaatgagtaaaata-a-g----aTCTGTT-------------AGG----aaccatt---a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92893 53 -    140218 A-----A-AT---TAAGCAACCT-TTCAA-AAGTGAGTAAAACA-G-A----AGCTGGT-------------GAA----AATCATT---A
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3776 33 -     41509 A-----A-AT---TAAACAACCT-TTCAA-AAGTGAGTAAAACA----------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_28377               I 1 I 18
s Orcinus_orca.KB316932.1                                  8102725 46 +  10937097 ----------------atgacct-ttcaa-aaatgagtaaaata-g-g----ATCTCTT-------------AAG----GACCATT---A
i Orcinus_orca.KB316932.1                                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13904 52 -     14239 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGG-------------AAG----AACCATT---G
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103732 52 - 174332312 a-----a--t---taagtgaccT-TTCAA-AATTGAGTAAATCA-C-A----ATCtggt-------------aag----aaatata---t
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39356 54 +    559221 a-----aatt---taaatgacct-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AAccatt---a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40246 53 -     51505 AA----A--T---TAAATGACCT-TTCAA-AAGAGAATAAAATA-G-A----ATCTGGT-------------ACA----AACTATT---A
i Otolemur_crassicaudatus.k141_649260                    I 1 C 0
s Otolemur_garnettii.GL873799.1                             353249 53 +   1103335 a----aa--t---taaatgacct-ttcaa-aagagaataaaata-g-a----atctGGT-------------ATA----AACTATT---A
i Otolemur_garnettii.GL873799.1                          I 1 C 0
s Ovis_aries.CM001607.2                                   26404286 52 -  44047080 a-----a--t---taaatgacct-tTCAA-AAATGAGTAAAACA-G-G----ATCTGTT-------------AGG----aaccatt---a
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4805 52 +     17875 A-----A--T---TAAATGACCT-TTCAA-AAATGAGTAAAACA-G-G----ATCTGTT-------------AGG----AACCATT---A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.KZ622849.1                                 33610 52 -    110857 a-----a--t---taggtgaCCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACCGTT---A
i Pan_troglodytes.KZ622849.1                             I 695 I 113
s Panthera_onca.PanOnc_flattened_line_3271                   24582 46 -    230217 ----------------ATGGCCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTGTT---A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461908 46 -  18783137 ----------------ATGGCCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTGTT---A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972567 46 +   8748460 ----------------ATGGCCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTGCT---A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615814 52 +   2937107 a-----a--t---gaaatgacct-TTCAA-AAATGAGTAAAACA-G-G----ATCTGTT-------------AGG----aaccatt---a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243258 52 - 183742232 a-----a--a---taggtgaCCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9720 52 +     21308 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292293 52 -  20919399 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22368 52 -     27687 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15514 52 +     16796 A-----A--A---TAGGTGACCT-TTCAA-AAGTCAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22325 52 -     23640 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15177 52 +     78924 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGAT-------------AAG----AACCATT---A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26444 52 +     31479 A-----A--T---TAAATGACCT-TTCAA-AAGAGAATAAAATA-G-A----ATCTGGT-------------ACA----AACTATT---A
i Perodicticus_ibeanus.k141_1921260                      I 3 C 0
s Perodicticus_potto.k141_1854441                            18814 52 -     24908 A-----A--T---TAAATGACCT-TTCAA-AAGAGAATAAAATA-G-A----ATCTGGT-------------ACA----AACTATT---A
i Perodicticus_potto.k141_1854441                        I 3 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1893 44 +      9367 C-----A--A---GAAATTGACT-CTCAA-AAG----CAAGGAA-G-A----ATCTGGT-------------AAt----atat-------
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         246975 30 +  18517816 a-----aa-t---taa---acct-ttcAA-ATGTGAGGGAAACA----------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      I 3 I 18
s Petromus_typicus.PetTyp_scaffold_17301                     32048 42 -     56120 A-----A--T---TAAATAACCT-TTAAA-AAGTGATCAAAATA-G-T----GTA---T-------------AAG----A----------
i Petromus_typicus.PetTyp_scaffold_17301                 I 1 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4246 52 -     63832 a-----a--T---TAAATGACCT-TTCAA-AAATGAGTAAAATA-G-G----ATCTCTT-------------AAG----GACCATT---A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 1
s Piliocolobus_badius.k141_2704958                            2538 52 +     55023 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2088 52 -     89929 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACAGTT---A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2677 52 +     40849 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACAGTT---A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254341 52 +  14605196 a-----a--a---taggtgaCCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACAGTT---A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3865 52 +     22231 A-----A--T---TAAATGCCCT-TTCAA-AAGTGAGTTAAATA-G-A----ATCTGGT-------------AAG----TACCGCT---A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             64962 52 +    207309 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6054 52 -     25401 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31798 52 +     58159 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32074 52 +     63561 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31834 52 +     51148 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556804 52 -   4542175 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31818 52 +     51125 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1243 52 +     19503 A-----A--T---TAAATGACCT-TTCTA-AAATGAGTAAAATA-G-G----ATCTGTT-------------AAG----GACCATT---A
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8229 52 +     39866 A-----A--T---TAGGTGACCT-TTCTA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3313 32 -      9282 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA----------------------------------------------
i Plecturocebus_brunneus.k141_862875                     C 0 I 18
s Plecturocebus_caligatus.k141_1382851                       42717 32 -     87950 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA----------------------------------------------
i Plecturocebus_caligatus.k141_1382851                   C 0 I 18
s Plecturocebus_cinerascens.k141_1164729                     43111 52 -     88961 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7809 32 -     39403 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA----------------------------------------------
i Plecturocebus_cupreus.k141_2351393                     C 0 I 18
s Plecturocebus_dubius.k141_1058799                          42760 32 +     87928 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA----------------------------------------------
i Plecturocebus_dubius.k141_1058799                      C 0 I 18
s Plecturocebus_grovesi.k141_2013005                          7806 52 -     60166 A-----A--T---TAGGTGAACT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14743 52 -     67232 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42659 52 -     90634 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44126 52 +     89403 A-----A--T---TAGGTGAACT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178036 52 - 189387572 a-----a--t---taggtgaCCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACCGTT---A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192853 52 -   9816681 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACCGTT---A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              27663 52 +     69807 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44849 52 -     80239 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                  274 53 +      7663 A-----A--T--TTAAATGACCT-TTCAA-AAGTGAATAATACA-G-A----AACTGGG-------------AAG----AACCATT---A
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982710 56 +   4620579 a-aaaag--c---taaatgacCT-TCCAA-AAGTGAGTAAAATA-G-A----ATCtggt-------------aag----aaatatt---a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566218 55 -   2598838 a--gaag--t---taaatgaccT-TTCAA-AAGTGAGCAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3856 55 -      7103 AGAA--G--T---TAAATGACCT-TTCAA-AAGTGAGCAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4453 55 -     11706 AGAA--G--T---TAAATGACCT-TTCAA-AAGTGAGCAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8191 55 -     30655 AGAA--G--T---TAAATGACCT-TTCAA-AAGTGAGCAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34504 55 +     46564 AGAA--G--T---TAAATGACCT-TTCAA-AAGTGAGCAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94783 55 -     98465 AGAA--G--T---TAAATGACCT-TTCAA-AAGTGAGCAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8422 55 +     35169 AGAA--G--T---TAAATGACCT-TTCAA-AAGTGAGCAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37580 53 +     52041 a-----aa-t---taaacaacct-TTTAA-AAGTGAGTAAAGCA-G-A----ATCCAGT-------------GAG----AATCATT---A
i Psammomys_obesus.NESX01036366.1                        I 2 C 0
s Pteronotus_parnellii.KE847780.1                            52255 51 -     66298 ------a--t---taaatgacct-TTCAA-AAGAGAGTGAAATA-G-A----ATCTGGA-------------AAG----AAccatt---a
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4769 55 -     18639 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----AGCCGGT-------------AAG----AACCATTAAAT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 14
s Pteropus_alecto.KB030862.1                               5840945 48 -  28871421 a-----a--t---taaataacct-tTCAA-AAGTGAGTGAAATG-G-A----ATCTggt-------------aat--------ttc---a
i Pteropus_alecto.KB030862.1                             C 0 I 22
s Pteropus_vampyrus.KN525825.1                             3537464 48 -   4952924 a-----a--t---taaataacct-ttCAA-AAGTGAGTGAAATG-G-A----ATCTggt-------------aat--------ttc---a
i Pteropus_vampyrus.KN525825.1                           C 0 I 18
s Puma_concolor.QAVW01001104.1                            18099225 46 +  38429054 ----------------ATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACTGTT---A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27037 52 +     91421 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACAGTT---A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153529 52 -   7812017 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7904 52 +     72585 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53301 52 +     55069 A-----A--T---TAAATGACCT-TTCAA-AAATTAGTAAAATA-G-G----ATCTGTT-------------AGG----AACCATT---A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022865 53 -  90668790 a-----aa-t---taaacaacct-GTCAA-AAGTGAGTAAAACA-G-A----ATCCAGT-------------GAG----AATCATT---A
i Rattus_norvegicus.chr16                                I 2 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914840 55 +   3329780 a-----a--aaaaaaaaaaacct-ttcaa-aagtGAGTGAAATA-G-A----ACCTGGT-------------GAG----caccatt---a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 4
s Rhinopithecus_bieti.k119_778604                             1610 52 +      7119 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122218 51 + 195417433 a-----a--a----aggtGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236460 52 -   7961872 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74878 52 -    116970 A-----A--T---TAAATAACCT-TTCAA-AAGTGAGCGAAATG-G-A----ATCTGGT-------------AAG----AATCATC---A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 18
s Saguinus_bicolor.k141_1429097                               4118 52 +     27962 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-C-A----ATGTGCT-------------GAG----GACTGTT---A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4013 52 +      6077 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-C-A----ATGTGCT-------------GAG----GACTGTT---A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4103 52 +      5971 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATGTGGT-------------GAG----GACTGTT---A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4024 52 +      5932 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAGAACA-G-A----ATGTGGT-------------GAG----GACTGTT---A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2366 52 -      4390 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATGTGGT-------------GAG----GACTGTT---A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391803 52 - 209938924 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-C-A----ATGTGCT-------------GAG----GACTGTT---A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                3973 52 +      5979 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATGTGGT-------------GAG----GACTGTT---A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                542 52 -     22275 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-C-A----ATGTGCT-------------GAG----GACTGTT---A
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        7974 52 +     16473 A-----A--T---TAAATGACCT-TTCAA-AAATGAGTAAAACA-G-G----ATCTGTT-------------AGG----AACCATT---A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109140 52 + 121099817 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30707 52 -     47369 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31093 52 -     79414 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27784 52 -     34454 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15185 52 -     22428 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30339 52 -     47109 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238391 52 +   5703754 A-----A--T---TAGGTGACCT-TTCAA-ACGTGAGTAAAAGA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           7981 52 +     21866 A-----A--T---TAGGTGACCT-TTCAA-ACGTGAGTAAAAGA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116015 53 +    313613 A-----A--T---TAAATGACCT-TTCAA-AAATGAGTAAAATA-GAG----ATCTGGT-------------AAG----AACCATT---A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25356 52 +     27374 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28870 52 +     58920 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15366 52 -     45317 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23025 52 -     42441 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25703 52 -     29113 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28777 52 -     48123 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49350 52 +     77746 A-----A-AT---TAAACAATCT-TTCAA-AAGTGAGTAAAACA-G-A----AGCTGG--------------GAA----AACCATT---A
i Sigmodon_hispidus.SigHis_scaffold_20193                I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864300 52 -   1910179 T-----T--G---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-T-G----ATATGAT-------------AAG----AACCATT---A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671450 52 +  18376816 a-----a--t---taaatgacct-ttgaa-aagtgaataaaata-t-a----acttGGT-------------AAG----AACCATT---A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868488 52 +   3870691 T-----A--T---TAGATGACCT-TTCAA-AAGTGAGTAAAACA-G-A----ATCCGGT-------------AAG----aaccatt---a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6839 51 -     97271 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----AGCTGGT-------------AAG----AACCATT----
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 19
s Suricata_suricatta.SurSur_flattened_line_6629             124999 52 +    196729 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AATCGTT---A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643889 52 +  69701581 a-----a--t---taaatgacct-ttcaa-aaatgagtaaaata-g-g----ATCTGGT-------------AAG----AACcatt---a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391295 52 +   1523678 A-----A--T---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACTGTT---A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14430 52 +     22964 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTGAAATA-G-A----ATCTGGT-------------AAG----AACCACT---A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2825 52 +      5583 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGAAATAAA-G-A----ATCTGGT-------------ATG----AGCCATT---A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191733 52 +    199430 A-----A--T---TAAATGACCT-TTCAA-AAGTAAGTAAAATA-G-A----AACTGGT-------------AAG----AACTATT---A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105703 52 -    539355 A-----A--T---TAAATGACCT-TTCAA-AAGTAAGTAAAATA-G-A----AACTGGT-------------AAG----AACTATT---A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 758 56 +      9917 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTGAAATA-G-AGTCTGTCTGGT-------------AAG----AACCATT---A
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7548 56 +     20590 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTGAAATA-G-AGTCTGTCTGGT-------------AAG----AACCATT---A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353244 52 - 186847797 a-----a--a---taggtgaCCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AATGGTT---A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24205 42 -     33621 A-----A--T---TAAATAACCT-TTCAA-AAGTGATCAAAACA-G-T----CTA---T-------------AAG----A----------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19923 52 -     31044 A-----A--T---TAAATGTCCT-TTCAA-AAGTGAGTAAAACG-G-A----ATCTGGT-------------AAG----GACCATT---G
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480259 52 -    610378 A-----A--A---TAAATGACCT-TTCAA-AAGTGACTGAAATA-G-A----ATCTGGA-------------AAG----AGCCATT---A
i Tonatia_saurophila.TonSau_scaffold_294                 I 8 C 0
s Trachypithecus_auratus.k141_1189070                        20902 52 +     26378 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33580 52 -     78344 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20227 52 +     25722 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28533 52 -     62838 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           28578 52 +     46913 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9385 52 -     28527 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30469 52 -     64340 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28506 52 -     63452 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                     9952 52 +     22490 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3377 52 -      6147 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10282 52 -     13050 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255522 52 -   6242583 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1546 52 +     19340 A-----A--A---TAGGTGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------GAG----AACGGTT---A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173587 52 -    200418 A-----A--T---TAAATGACCT-TTCAA-AAATGAGTAAAATA-A-G----ACATGCT-------------AGG----AATCATT---A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480564 53 -  10818551 c-----a--t--ttaaatgacCC-TTCAA-AAGCATATAAAATA-G-A----ATCTGGG-------------AAG----aaccatt---a
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834235 52 -   4065304 a-----a--t---tgtatgaact-ttcaa-aagtaagtaaaata-g-g----ATCTGGT-------------AAG----AACTACT---A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8258 52 -     70247 A-----A--T---TGTACGAACT-TTCAA-AAGTAAGTAAAATA-G-G----ATCTGGT-------------AAG----AACTACC---A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17365832 52 -  33153633 a-----a--t---taaatgacct-ttcaa-aaatgagtaaaata-a-g----atCTCTT-------------AAG----GACCATT---A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3756 53 -     21056 A-----A--T---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-GAG----ATATGGT-------------AAG----AACTATT---A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181945 52 +   5085361 a-----a--t---taaatgacct-tTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----Aaccatt---a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25358 56 -     30710 AAAAA-G--T---TAAATGACCT-TTCAA-AAGTGGGTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24265 56 -    147434 AAAAA-G--T---TAAATGACCT-TTCAA-AAGTGGGTAAAATA-G-A----ATCTGGT-------------AAG----AACTATT---A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76420 51 +   5488506 a-----a--t---taaatcacct-ttcaa-aaatgagtaaaata-g-g----ATCTAGT-------------A-g----aaccatt---a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105078 53 -    112863 A-----A-AT---TAAATGACCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----AACCATT---A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174275 52 -    224448 A-----A--T---TAGATGACCT-TTCAA-AAGTGAGTAAAAAA-G-A----ATCTGGT-------------AAG----AACCATT---A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         28973 48 -     86975 A-----A--T---TAAATGATCT-TTCAA-AAGTGAGTAAAATA-G-A----ATCTGGT-------------AAG----ta----t---a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                       742 53 -       833 A-----A-AT---TAAATGAACT-TTGAA-AAGTGAGTGAAACA-C-A----ATCTTGT-------------AAG----ACCCACT---t
i Zapus_hudsonius.ZapHud_scaffold_501999                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1123 52 +      2126 a-----a--T---TAAATGACCT-TTCAA-AAATGAGTAAAGTA-G-G----ATCTGTT-------------AAG----GACCATT---A
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Hipposideros_armiger.JXIK01000431.1                      1554070 2335 -   1711038 T

a score=0.000000
s hg38.chrUn_KI270755v1                                       5635 3 +     36723 AG--------A
s Acinonyx_jubatus.LLWD01001279.1                           813013 4 +   1699592 aa------t-a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25300 3 +     63021 AA--------A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415482 4 +  29979442 aa------t-a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215819 4 +    347723 ca------c-a
i Ailurus_fulgens.LNAC01001112.1                         I 25 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18239 2 -     61208 AA---------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 14
s Allenopithecus_nigroviridis.k141_3755588                   47951 3 +     53615 AA--------A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43933 3 +     44087 AA--------A
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16541 3 -     21945 AA--------A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18224 3 +     32033 AA--------A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72387 3 -     84148 AA--------A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44626 3 -     78289 AA--------A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44065 3 +     55831 AA--------A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42515 3 -     64179 AA--------A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24149 3 -     24835 AA--------A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41140 3 +     45454 AA--------A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46789 3 +     70886 AA--------A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8962 3 +     30854 AA--------A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33096 3 +     42133 AA--------A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585471 3 +   2318259 aa--------a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177268 3 -    412891 AA--------A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50577 3 -     68529 AA--------A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1343 3 +     17741 AA--------A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1968 3 -     15923 AA--------A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672250 3 +   5030052 AA--------A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2244 3 -     16391 AA--------A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1803 3 -     17186 AA--------A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16161 3 -     32367 AA--------A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19701 3 -     45910 AA--------T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5537 3 -     15198 AA--------A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274841 3 +  21539123 AA--------A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11007 3 +     48076 AA--------A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6144 3 -     28759 AA--------A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33698 3 +     44353 AA--------A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49067 3 -     71267 AA--------A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23127 3 -     33135 AA--------A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6379 3 +     11645 AA--------T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6387 3 -     19611 AA--------T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963621 3 -  23207421 aa--------t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          121 3 -     25979 aa--------t
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86479 3 +    124022 AA--------A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22012 3 +    288883 aa--------a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356404 3 +  48749331 aa--------a
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754968 3 +   1948126 aa--------a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545110 3 -  45695690 aa--------a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530131 3 -   4408762 aa--------a
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8016 3 +     28062 AA--------A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43310 3 -     91139 AA--------A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20836 3 +     95584 AA--------A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20749 3 +    119600 AA--------A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10323 3 +     18648 AA--------A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9858 3 -     13885 AA--------A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1928 3 -      8861 AA--------A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454320 3 + 189096842 AA--------A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1843 3 +      8664 AA--------A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631138 3 +  17673402 aa--------a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665424 3 +   7040546 aa--------a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209084 3 +   1652518 aa--------a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505500 4 +  60362399 AA---T----A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9136 4 -     23171 AA---T----A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222479 4 +   9314153 aa------t-a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615614 4 +  59632846 aa------t-a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107195 4 -  63665305 aa------t-a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409200 3 -  46296322 aa--------a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591474 3 +  44709034 aa--------a
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270586 3 +    496798 aa--------a
i Carlito_syrichta.NW_007259797.1                        C 0 I 10
s Carollia_perspicillata.CarPer_scaffold_107871                379 3 +      9923 AT--------A
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 14
s Castor_canadensis.CasCan_scaffold_39952                    27815 3 -     39886 AA--------G
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79675 3 -    217609 AA--------A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebuella_niveiventris.k141_592277                           5241 3 -     12580 AA--------A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43299 3 +     53515 AA--------A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371227 3 -  26074798 AA--------A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8116 3 -     34880 AA--------A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67211 3 -     89041 AA--------A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2550 3 -      5494 AA--------A
i Cephalopachus_bancanus.k141_1689090                    C 0 I 8
s Ceratotherium_simum.JH767749.1                          15492309 3 -  27778364 aa--------a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19142 3 +     27315 AA--------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141128 3 -   4669795 AA--------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44870 3 +     47900 AA--------A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44694 3 -     44860 AA--------A
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44683 3 -    148725 AA--------A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26870 3 -     40656 AA--------A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6836 3 +     20796 AA--------A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11953 3 -     17524 AA--------A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27675 3 -     34525 AA--------A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11457 3 -     25376 AA--------A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364052 3 -  39242232 AA--------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269769 3 +  21565898 AA--------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32142 3 -     45857 AA--------A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27041 3 -     32606 AA--------A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3200 3 +      8499 AA--------A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25597 3 +     70610 AA--------A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22567 3 +     36323 AA--------A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12885 3 -     19938 AA--------A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30752 3 -     33796 AA--------T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5269 3 -     15404 AA--------T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9116 3 -     32913 AA--------A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19529 3 -     40346 AA--------A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19784 3 +    216457 AA--------A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19577 3 +     39636 AA--------A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4172 3 +      5346 AA--------A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42647 3 -    112038 AA--------A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8218 3 +     34062 AA--------A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343457 3 +  18827391 AA--------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10005 3 -     44032 AA--------A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304782 3 - 135778131 AA--------A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14925 3 +     15858 AA--------A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606500 3 -    839153 aa--------a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                923 3 +      2406 AT--------A
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409207 3 -   2368649 AA--------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379083 3 - 200372422 AA--------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2632 3 -     84244 AA--------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807379 4 +  53390261 aa------t-a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2893 8 -      8242 AAA-ATA-C-A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44439 3 -     83289 AA--------A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115003 3 - 224834208 AA--------A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9588 2 +     12657 AG---------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4468 4 +     87169 TA---T----A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 9
s Ctenodactylus_gundi.CteGun_scaffold_65                    645130 3 -   1526836 AT--------A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110235 3 -   2246927 aa--------a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292687 3 +  12879189 AA--------T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632030 1 -  35494412 ----------A
i Delphinapterus_leucas.KZ290073.1                       I 1 C 0
s Desmodus_rotundus.KZ672366.1                              330589 3 -   2620052 ga--------a
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664591 3 -   1390856 aa--------a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139386 3 -    198055 AA--------A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950611 3 -  37912305 aa--------a
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5545 3 -     10735 AA--------A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62855206 3 - 111700974 at--------a
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6363 8 +     19438 ata-cat-c-a
i Eidolon_helvum.AWHC01266696.1                          I 18 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239840 3 -    607251 aa--------a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108854 3 -  10337057 AA--------A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31151 3 +    110024 AA--------A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13122 3 +     18970 AA--------A
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579010 3 +  14770903 aa--------a
i Eptesicus_fuscus.JH977646.1                            C 0 I 5
s Equus_asinus.JREZ01000139.1                              3041471 3 -   4378816 aa--------a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375409 3 +  39960074 AA--------A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             790 3 -      1194 AA--------A
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666175 2 +   7059049 aa---------
i Erinaceus_europaeus.JH835339.1                         C 0 I 1
s Erythrocebus_patas.Contig38                               262985 3 +  21539334 AA--------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71238 3 -    133382 AA--------A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202              782 3 -      1170 AA--------A
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               14900 3 -     24895 AA--------T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42610 3 -     70999 AA--------T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86580 3 +    112731 AA--------T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43143 3 +     68309 AA--------T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53467 3 -     65740 AA--------T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24099 3 -     75513 AA--------T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48294 3 -     97555 AA--------T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5018 3 +     30972 AA--------T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42738 3 -     52037 AA--------T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59141 3 -    111500 AA--------T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246922 4 - 206538554 aa------t-a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116708 4 - 205367284 aa------t-a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27805 4 -     30238 AA---T----A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Galago_moholi.ctg3793                                     125137 3 -    137831 AA--------T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8682 3 +     22493 AA--------T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20753 3 -     32986 AA--------T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1287 3 -     28519 AA--------A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91543 3 -     95226 aa--------a
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34608 3 -     36801 AA--------A
i Glis_glis.GliGli_scaffold_33859                        I 16 C 0
s Gorilla_beringei.k141_3358147                               5935 3 -      8343 AG--------A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254950 3 - 186649187 AG--------A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2103 3 -     78134 AA--------A
i Graphiurus_murinus.GraMur_scaffold_10447               I 16 C 0
s Hapalemur_alaotrensis.k141_330369                          14825 3 -     40692 AA--------T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36227 3 +     49394 AA--------T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61095 3 -     66874 AA--------T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9969 3 -     42923 AA--------T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16969 3 -     53142 AA--------T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30898 4 -    327341 TA---T----T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9218 3 +     48891 AA--------A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                 554 3 +      4291 AA--------A
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7741 3 -     36432 AA--------A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551735 1 -   1711038 ----------a
i Hipposideros_armiger.JXIK01000431.1                    T 2335 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1184 1 -      2730 ----------A
i Hipposideros_galeritus.HipGal_scaffold_164997          I 4 C 0
s Hoolock_leuconedys.ctg274                                    142959 3 -    630532 AG--------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69813 4 +     83186 TA---T----A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               5993 3 +     12352 AG--------A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13177 3 +     55766 AG--------A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052777 3 + 191637585 AG--------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801655 3 +  11177569 AG--------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4609 3 -    135385 AT--------A
i Hystrix_cristata.HysCri_scaffold_5660                  I 3 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386961 3 +   7955117 aa--------a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2522 3 +     11955 AA--------T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10129 3 -     16823 AA--------A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1239945 6 +   9596543 aa---ta-t-a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 71972 3 -     97402 AA--------A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43392 3 +    110728 AA--------A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63005 3 -     65777 AA--------A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 5
s Lemur_catta.scaffold_24                                 14759618 3 +  30322482 AA--------T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4307 3 -     13097 AA--------A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4061 3 +      5940 AA--------A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3891 3 -      5717 AA--------A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10263 3 -     11567 AA--------A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11644 3 -     12945 AA--------A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9128 3 +     29618 AA--------T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9124 3 +     31569 AA--------T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9134 3 +     24756 AA--------T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9134 3 +     16388 AA--------T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17989 1 +     24238 ----------A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813615 1 -   3914936 t----------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 6
s Lipotes_vexillifer.KE559953.1                             341318 3 +    662738 AA--------A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334013 3 -   1826925 AA--------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10709 3 +     19643 AA--------T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5044372 3 -   6120653 AA--------T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39081150 3 +  43346337 AA--------A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614769 4 +  59628241 aa------t-a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45407 3 -     61512 AA--------A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373069 3 -  60120075 AA--------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25332 3 +     30207 AA--------A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           22435 3 -     24934 AA--------A
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25285 3 +     30527 AA--------A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36461 3 -     50087 AA--------A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46205 3 +     51645 AA--------A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415407 3 - 187317192 AA--------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399638 3 +  25927173 AA--------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48810 3 -     62418 AA--------A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1346 3 +     14901 AA--------A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45282 3 +     59329 AA--------A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271190 3 +    668171 AA--------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                 1466 3 +      1732 AA--------A
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2988 3 +     17132 AA--------A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223356 8 -    270270 ATA--TATC-A
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 44 C 0
s Mandrillus_leucophaeus.scaffold280                        322477 3 +  24302211 AA--------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357308 3 -    752769 AA--------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673661 4 -    737560 aa------a-a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220957 4 +    317179 aa------a-a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501181 3 +  40650429 aa--------a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150499 8 +    207569 ATA-A-A-TTA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26345 4 -     74585 ca------c-a
i Mellivora_capensis.MelCap_flattened_line_19308         I 25 I 33
s Meriones_unguiculatus.MerUng_scaffold_7390                 50291 3 -    140813 AA--------A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429389 3 +  29670104 AA--------A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87600 3 +     93471 AA--------A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10430 3 +     17804 AA--------A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10930 3 -     12984 AA--------A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19246 3 -     26561 AA--------A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984735 3 +  93316391 AA--------T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185194 3 +    200668 AA--------A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962590 3 +  27267610 AA--------A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363359 3 -   8254450 aa--------a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 5
s Miniopterus_schreibersii.MinSch_scaffold_23309             42266 3 -     48117 AA--------A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 5
s Miopithecus_ogouensis.k141_1534655                         22494 3 -     27822 AA--------A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8626 1 +     27589 T----------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 6
s Mirza_zaza.k141_766280                                     52532 3 -     62432 AA--------T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359705 1 +    437263 ----------A
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179415 3 +    366855 AA--------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_13123                  25664 3 -     82753 AA--------A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18649 4 -     63510 TA---T----T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39323 3 +     47283 AA--------A
i Murina_feae.MurFea_scaffold_17764                      C 0 I 5
s Mus_caroli.LT608237.1                                   35593313 3 + 120012414 aa--------a
i Mus_caroli.LT608237.1                                  C 0 I 4
s Mus_musculus.chr8                                       41687699 3 + 129401213 AA--------A
i Mus_musculus.chr8                                      C 0 I 4
s Mus_spretus.CM004101.1                                  39496992 3 + 130317789 AA--------A
i Mus_spretus.CM004101.1                                 C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_12866             83434 3 -     86153 AA--------A
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 16 C 0
s Myotis_brandtii.KE162005.1                               9793613 3 +  10118263 aa--------a
i Myotis_brandtii.KE162005.1                             C 0 I 5
s Myotis_davidii.KB100139.1                                4387743 3 +   6019432 aa--------a
i Myotis_davidii.KB100139.1                              C 0 I 5
s Myotis_lucifugus.GL429869.1                               383570 3 +   4330536 aa--------a
i Myotis_lucifugus.GL429869.1                            C 0 I 5
s Myotis_myotis.MyoMyo_scaffold_66571                         2379 3 +     18357 AA--------A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 5
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119888 3 +    130748 AA--------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946424 3 +   3037898 AA--------A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29132 3 +     34575 AA--------A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232383 1 -   7148211 ----------A
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128390 3 -    149072 AA--------A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53885 3 -    132029 AG--------A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9980 3 -     16345 AG--------A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15865 3 +     22201 AG--------A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414086 3 -  22158432 AG--------A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26263 3 -     54323 AG--------A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198365 4 +   9404916 aa------t-a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636737 3 + 196305487 AA--------T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3491 3 -      3937 AA--------T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564996 3 - 199412804 AA--------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557048 3 -   3988456 NN--------N
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451827 4 +   2017862 ta------t-a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436434 3 -    630418 aa--------a
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14426 3 +    150152 aa--------a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92946 3 -    140218 AA--------A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3827 3 -     41509 AA--------A
i Onychomys_torridus.OnyTor_scaffold_28377               I 18 C 0
s Orcinus_orca.KB316932.1                                  8102771 3 +  10937097 AA--------A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13956 3 -     14239 AA--------A
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103784 3 - 174332312 at--------a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39410 4 +    559221 aa------t-a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40299 3 -     51505 AA--------T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             353302 3 +   1103335 AA--------T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404338 3 -  44047080 aa--------a
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4857 3 +     17875 AA--------A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472979 3 - 189151597 AG--------A
i Pan_troglodytes.CM009242.2                             I 52 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24628 4 -    230217 AA---T----A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461954 4 -  18783137 AA---T----A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972613 4 +   8748460 AA---T----A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615866 3 +   2937107 aa--------a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243310 3 - 183742232 AA--------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9772 3 +     21308 AA--------A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292345 3 -  20919399 AA--------A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22420 3 -     27687 AA--------A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15566 3 +     16796 AA--------A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22377 3 -     23640 AA--------A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15229 4 +     78924 TA---T----A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26496 3 +     31479 AA--------T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18866 3 -     24908 AA--------T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1937 3 +      9367 at--------a
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247023 3 +  18517816 AA--------A
i Peromyscus_maniculatus.KI615324.1                      I 18 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4299 1 -     63832 ----------A
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 1 C 0
s Piliocolobus_badius.k141_2704958                            2590 3 +     55023 AA--------A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2140 3 -     89929 AA--------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2729 3 +     40849 AA--------A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254393 3 +  14605196 AA--------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3917 4 +     22231 AA---T----A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 5
s Pithecia_albicans.k141_1239476                             65014 3 +    207309 AA--------A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6106 3 -     25401 AA--------A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31850 3 +     58159 AA--------A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32126 3 +     63561 AA--------A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31886 3 +     51148 AA--------A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556856 3 -   4542175 AA--------A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31870 3 +     51125 AA--------A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1295 3 +     19503 AA--------A
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8281 3 +     39866 AA--------A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3363 3 -      9282 AA--------A
i Plecturocebus_brunneus.k141_862875                     I 18 C 0
s Plecturocebus_caligatus.k141_1382851                       42767 3 -     87950 AA--------A
i Plecturocebus_caligatus.k141_1382851                   I 18 C 0
s Plecturocebus_cinerascens.k141_1164729                     43163 3 -     88961 AA--------A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7859 3 -     39403 AA--------A
i Plecturocebus_cupreus.k141_2351393                     I 18 C 0
s Plecturocebus_dubius.k141_1058799                          42810 3 +     87928 AA--------A
i Plecturocebus_dubius.k141_1058799                      I 18 C 0
s Plecturocebus_grovesi.k141_2013005                          7858 3 -     60166 AA--------A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14795 3 -     67232 AA--------A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42711 3 -     90634 AA--------A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44178 3 +     89403 AA--------A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178088 3 - 189387572 AG--------A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192905 3 -   9816681 AG--------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              27715 3 +     69807 AA--------A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44901 3 -     80239 AA--------G
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                  327 3 +      7663 AA--------A
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982766 3 +   4620579 aa--------t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566273 3 -   2598838 AA--------T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3911 3 -      7103 AA--------T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4508 3 -     11706 AA--------T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8246 3 -     30655 AA--------T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34559 3 +     46564 AA--------T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94838 3 -     98465 AA--------T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8477 3 +     35169 AA--------T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37633 3 +     52041 AA--------A
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52306 3 -     66298 aa--------a
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                               5841015 8 -  28871421 ata-cat-c-a
i Pteropus_alecto.KB030862.1                             I 22 C 0
s Pteropus_vampyrus.KN525825.1                             3537530 8 -   4952924 ata-cat-c-a
i Pteropus_vampyrus.KN525825.1                           I 18 C 0
s Puma_concolor.QAVW01001104.1                            18099271 4 +  38429054 AA---T----A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27089 3 +     91421 AA--------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153581 3 -   7812017 AA--------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7956 3 +     72585 AA--------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53353 3 +     55069 AA--------A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022918 3 -  90668790 AA--------A
i Rattus_norvegicus.chr16                                C 0 I 2
s Rhinolophus_sinicus.LVEH01000134.1                       2914899 1 +   3329780 ----------a
i Rhinolophus_sinicus.LVEH01000134.1                     I 4 C 0
s Rhinopithecus_bieti.k119_778604                             1662 3 +      7119 AA--------A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122269 3 + 195417433 AA--------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236512 3 -   7961872 AA--------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74948 8 -    116970 ATACAT--C-A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 18 C 0
s Saguinus_bicolor.k141_1429097                               4170 3 +     27962 AA--------A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4065 3 +      6077 AA--------A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4155 3 +      5971 AA--------A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4076 3 +      5932 AA--------A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2418 3 -      4390 AA--------A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391855 3 - 209938924 AA--------A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4025 3 +      5979 AA--------A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                594 3 -     22275 AA--------A
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8026 3 +     16473 AA--------A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109192 3 + 121099817 AA--------A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30759 3 -     47369 AA--------A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31145 3 -     79414 AA--------A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27836 3 -     34454 AA--------A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15237 3 -     22428 AA--------A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30391 3 -     47109 AA--------A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238443 3 +   5703754 AA--------A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8033 3 +     21866 AA--------A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116068 4 +    313613 AA---T----A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25408 3 +     27374 AA--------A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28922 3 +     58920 AA--------A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15418 3 -     45317 AA--------A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23077 3 -     42441 AA--------A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25755 3 -     29113 AA--------A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28829 3 -     48123 AA--------A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49402 3 +     77746 AA--------A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864352 2 -   1910179 AA---------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671502 2 +  18376816 AA---------
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1868540 3 +   3870691 aa--------a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6909 4 -     97271 CAA-------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 19 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125051 4 +    196729 TA---T----T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643941 3 +  69701581 aa--------g
i Sus_scrofa.CM000828.4                                  C 0 I 2
s Symphalangus_syndactylus.tarseq_199                       391347 3 +   1523678 AG--------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14482 3 +     22964 AA--------A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2877 3 +      5583 AA--------A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191785 3 +    199430 AA--------A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105755 3 -    539355 AA--------A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 814 3 +      9917 AT--------A
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7604 3 +     20590 AT--------A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353296 3 - 186847797 AA--------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   19975 3 -     31044 AA--------A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480311 3 -    610378 TA--------A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20954 3 +     26378 AA--------A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33632 3 -     78344 AA--------A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20279 3 +     25722 AA--------A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28585 3 -     62838 AA--------A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           28630 3 +     46913 AA--------A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9437 3 -     28527 AA--------A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30521 3 -     64340 AA--------A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28558 3 -     63452 AA--------A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10004 3 +     22490 AA--------A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3429 3 -      6147 AA--------A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10334 3 -     13050 AA--------A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255574 3 -   6242583 AA--------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1598 3 +     19340 AA--------A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173639 3 -    200418 AA--------A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480617 3 -  10818551 aa--------a
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834287 3 -   4065304 AT--------A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8310 3 -     70247 AT--------A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17365884 3 -  33153633 AA--------A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3809 4 -     21056 AA---T----A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                181997 4 +   5085361 aa------t-a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25414 3 -     30710 AA--------T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24321 3 -    147434 AA--------T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76471 3 +   5488506 aa--------a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105131 4 -    112863 AA---T----A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174327 3 -    224448 AA--------A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29021 4 -     86975 ta------t-a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                       795 3 -       833 aa--------a
i Zapus_hudsonius.ZapHud_scaffold_501999                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1175 3 +      2126 AA--------A
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Fukomys_damarensis.KN121974.1                            2916526 0 -   3816255 C
e Myocastor_coypus.MyoCoy_scaffold_15261                     63243 11 +     67721 I
e Capromys_pilorides.CapPil_scaffold_652123                   1664 11 -      1880 I
e Chinchilla_lanigera.JH722012.1                           1238890 11 -   2543920 I
e Dasyprocta_punctata.DasPun_flattened_line_15900            28225 0 +     75252 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              24247 0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     32090 0 -     56120 C
e Octodon_degus.JH651603.1                                11055192 11 -  11899542 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71961 0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1932495 0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10485 0 +     14636 C
e Dinomys_branickii.DinBra_scaffold_10381                    98976 11 -    115145 I
e Cuniculus_paca.CunPac_flattened_line_7025                   4448 0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  18456 11 +     50838 I
e Cavia_tschudii.CavTsc_scaffold_23560                       63049 0 -     66877 C
e Cavia_porcellus.DS562891.1                               4999968 0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4996526 0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    46284 1 +    145209 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          4824 14 -     18639 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14355257 8 +  14710649 I
e Enhydra_lutris.KZ291758.1                               24916223 10 +  41312741 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5638  8 +     36723 C--------------A----------------C----------GT-T-----------------TG
s Acinonyx_jubatus.LLWD01001279.1                           813017 16 +   1699592 t--------------a----------------catgtatat--at-t-----------------tg
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25303 11 +     63021 A--------------A----------------C---------AGTAT----------------CTG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415486 14 +  29979442 t--------------a----------------tacatat----aa-t-----------------tg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215823 14 +    347723 c--------------a----------------cacgtat----at-t-----------------tg
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47954  8 +     53615 C--------------A----------------C----------GT-T-----------------TG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43936  8 +     44087 C--------------A----------------C----------GT-T-----------------TG
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16544  8 -     21945 C--------------A----------------C----------GT-T-----------------TG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18227  8 +     32033 C--------------A----------------C----------GT-T-----------------TG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72390 10 -     84148 T--------------A----------------C--------ATGC-T-----------------TG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44629 10 -     78289 T--------------A----------------C--------ATGC-T-----------------TG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44068 10 +     55831 T--------------A----------------C--------ATGC-T-----------------TG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42518 10 -     64179 T--------------A----------------C--------ATGC-T-----------------TG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24152 10 -     24835 T--------------A----------------C--------ATGC-T-----------------TG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41143 10 +     45454 T--------------A----------------C--------ATGC-T-----------------TG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46792 10 +     70886 T--------------A----------------C--------ATGC-T-----------------TG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8965 10 +     30854 T--------------A----------------C--------ATGC-T-----------------TG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33099 10 +     42133 T--------------A----------------C--------ATGC-T-----------------TG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585474 10 +   2318259 t--------------a----------------tat--------at-t-----------------tg
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177271 12 -    412891 T--------------A----------------T------ATATAT-T-----------------TG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50580 10 -     68529 T--------------A----------------T--------ATAT-T-----------------TG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1346 10 +     17741 T--------------A----------------C--------GTGC-T-----------------TG
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1971 10 -     15923 T--------------A----------------C--------GTGC-T-----------------TG
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672253 10 +   5030052 T--------------A----------------C--------ATGC-T-----------------TG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2247 10 -     16391 T--------------A----------------C--------ATGC-T-----------------TG
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1806 10 -     17186 T--------------A----------------C--------ATGC-T-----------------TG
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16164 10 -     32367 T--------------A----------------T--------TTAT-T-----------------TG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19704 10 -     45910 T--------------A----------------T--------GTGT-T-----------------TG
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5540 10 -     15198 T--------------A----------------T--------ATAT-T-----------------TG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274844 10 +  21539123 T--------------A----------------C--------ATGC-T-----------------TG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11010 10 +     48076 T--------------A----------------C--------ATGC-T-----------------TG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6147 10 -     28759 T--------------A----------------C--------ATGC-T-----------------TG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33701 10 +     44353 T--------------A----------------C--------ATGC-T-----------------TG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49070 10 -     71267 T--------------A----------------C--------ATGC-T-----------------TG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23130 10 -     33135 T--------------A----------------C--------ATGC-T-----------------TG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6382 10 +     11645 T--------------A----------------T--------GTGT-T-----------------TG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6390 10 -     19611 T--------------A----------------T--------GTGT-T-----------------TG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963624 10 -  23207421 t--------------a----------------tat--------at-t-----------------tg
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          124 10 -     25979 t--------------a----------------tat--------at-t-----------------tg
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86482 10 +    124022 T--------------A----------------T--------CTAT-T-----------------TG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22015 10 +    288883 t--------------a----------------tat--------at-t-----------------tg
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356407 10 +  48749331 t--------------a----------------tat--------at-t-----------------tg
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754971 10 +   1948126 t--------------a----------------tat--------at-t-----------------tg
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545113 10 -  45695690 t--------------a----------------tat--------at-t-----------------tg
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530134 10 -   4408762 t--------------a----------------tat--------at-t-----------------tg
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8019 10 +     28062 T--------------A----------------C--------ATGC-T-----------------TG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43313 10 -     91139 T--------------A----------------C--------ATGC-T-----------------TG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20839 10 +     95584 T--------------A----------------C--------ATGC-T-----------------TG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20752 10 +    119600 T--------------A----------------C--------ATGC-T-----------------TG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10326 10 +     18648 T--------------A----------------C--------ATGC-T-----------------TG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9861 10 -     13885 T--------------A----------------C--------ATGC-T-----------------TG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1931 10 -      8861 T--------------A----------------C--------ATGC-T-----------------TG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454323 10 + 189096842 T--------------A----------------C--------ATGC-T-----------------TG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1846 10 +      8664 T--------------A----------------C--------ATGC-T-----------------TG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631141 10 +  17673402 t--------------a----------------tat--------at-t-----------------tg
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665427 10 +   7040546 t--------------a----------------tat--------at-t-----------------tg
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209087 10 +   1652518 t--------------a----------------tat--------at-t-----------------tg
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505504 14 +  60362399 C--------------A----------------T----ATATATTT-T-----------------TG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9140 14 -     23171 C--------------A----------------T----ATATATTT-T-----------------TG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222483 14 +   9314153 c--------------a----------------tatatat----tt-t-----------------tg
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615618 14 +  59632846 c--------------a----------------tatatat----tt-t-----------------tg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107199 14 -  63665305 c--------------a----------------tatatat----tt-t-----------------tg
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409203 10 -  46296322 t--------------a----------------tat--------at-t-----------------tg
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591477 10 +  44709034 t--------------a----------------tat--------at-t-----------------tg
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1675  6 -      1880 ---------------A----------------A--------GTAC---------------------
i Capromys_pilorides.CapPil_scaffold_652123              I 11 I 1
s Carlito_syrichta.NW_007259797.1                           270599  4 +    496798 --------------------------------------------t-t-----------------tg
i Carlito_syrichta.NW_007259797.1                        I 10 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                396 12 +      9923 T--------------A----------------T------ATATAT-T-----------------TG
i Carollia_perspicillata.CarPer_scaffold_107871          I 14 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27818  7 -     39886 T--------------A----------------T--------ATAT---------------------
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79678  9 -    217609 ---------------A----------------T--------ATAT-T-----------------TG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996526  6 +  23392119 ---------------A----------------A--------GTAC---------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 1
s Cavia_porcellus.DS562891.1                               4999968  6 +  23407841 ---------------A----------------A--------GTAC---------------------
i Cavia_porcellus.DS562891.1                             C 0 I 1
s Cavia_tschudii.CavTsc_scaffold_23560                       63049  6 -     66877 ---------------A----------------A--------GTAC---------------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 1
s Cebuella_niveiventris.k141_592277                           5244 10 -     12580 T--------------A----------------C--------ATGC-T-----------------TG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43302 10 +     53515 T--------------A----------------C--------ATGC-T-----------------TG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371230 10 -  26074798 T--------------A----------------T--------ACGC-T-----------------TG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8119 10 -     34880 T--------------A----------------T--------ACGC-T-----------------TG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67214 10 -     89041 T--------------A----------------T--------ACGC-T-----------------TG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2561  4 -      5494 --------------------------------------------T-T-----------------TT
i Cephalopachus_bancanus.k141_1689090                    I 8 C 0
s Ceratotherium_simum.JH767749.1                          15492312 10 -  27778364 t--------------a----------------tat--------gt-t-----------------tg
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19145 10 +     27315 T--------------A----------------T--------ATGT-T-----------------TG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141131  8 -   4669795 C--------------A----------------C----------GT-T-----------------TG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44873  8 +     47900 C--------------A----------------C----------GT-T-----------------TG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44697  8 -     44860 C--------------A----------------C----------GT-T-----------------TG
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44686  8 -    148725 C--------------A----------------C----------GT-T-----------------TG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26873  8 -     40656 C--------------A----------------C----------GT-T-----------------TG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6839  8 +     20796 C--------------A----------------C----------GT-T-----------------TG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11956  8 -     17524 C--------------A----------------C----------GT-T-----------------TG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27678  8 -     34525 C--------------A----------------C----------GT-T-----------------TG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11460  8 -     25376 C--------------A----------------C----------GT-T-----------------TG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364055  8 -  39242232 C--------------A----------------C----------GT-T-----------------TG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269772  8 +  21565898 C--------------A----------------C----------GT-T-----------------TG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32145  8 -     45857 C--------------A----------------C----------GT-T-----------------TG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27044  8 -     32606 C--------------A----------------C----------GT-T-----------------TG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3203  8 +      8499 C--------------A----------------C----------GT-T-----------------TG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25600  8 +     70610 C--------------A----------------C----------GT-T-----------------TG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22570  8 +     36323 C--------------A----------------C----------GT-T-----------------TG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12888  8 -     19938 ---------------A----------------T--------ATAT-T-----------------T-
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30755 10 -     33796 T--------------A----------------T--------GTGT-T-----------------TG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5272 10 -     15404 T--------------A----------------T--------GTGT-T-----------------TG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9119 10 -     32913 T--------------A----------------C--------ATGC-T-----------------TG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19532 10 -     40346 T--------------A----------------C--------ATGC-T-----------------TG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19787 10 +    216457 T--------------A----------------C--------ATGC-T-----------------TG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19580 10 +     39636 T--------------A----------------C--------ATGC-T-----------------TG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238901  6 -   2543920 ---------------A----------------A--------GTAC---------------------
i Chinchilla_lanigera.JH722012.1                         I 11 I 1
s Chiropotes_albinasus.k141_1946120                           4175 10 +      5346 T--------------A----------------C--------TTGC-T-----------------TG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42650 10 -    112038 T--------------A----------------C--------ATGC-T-----------------TG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8221 10 +     34062 T--------------A----------------C--------ATGC-T-----------------TG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343460  8 +  18827391 C--------------A----------------C----------GT-T-----------------TG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10008  8 -     44032 C--------------A----------------C----------GT-T-----------------TG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304785  8 - 135778131 C--------------A----------------C----------GT-T-----------------TG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14928  9 +     15858 ---------------A----------------T--------ATAT-T-----------------TG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606503  9 -    839153 ---------------a----------------tat--------at-t-----------------tg
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                926 16 +      2406 T--------------A----------------T--------ATAT-A-----------CATCTATG
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409210  8 -   2368649 C--------------A----------------C----------AT-T-----------------TG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379086  8 - 200372422 C--------------A----------------C----------AT-T-----------------TG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2635  8 -     84244 C--------------A----------------C----------AT-T-----------------TG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807383 10 +  53390261 t--------------a----------------tat--------at-t-----------------tg
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2901 10 -      8242 T--------------A----------------T--------ATAT-T-----------------TG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44442 11 -     83289 C--------------A----------------C---------AATAT----------------CCA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115006 11 - 224834208 C--------------A----------------C---------AATAT----------------CTG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9591  9 +     12657 T--------------A----------------T--------GCAT-T-----------------T-
i Crocidura_indochinensis.CroInd_scaffold_77846          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4481  5 +     87169 -------------------------------------------AT-T-----------------TG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 9 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645133 11 -   1526836 T--------------A----------------A--------GTATAT-----------------TG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18467  6 +     50838 ---------------A----------------A--------GTAC---------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 11 I 1
s Cuniculus_paca.CunPac_flattened_line_7025                   4448  6 +     36344 ---------------A----------------A--------GTAC---------------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 1
s Dasyprocta_punctata.DasPun_flattened_line_15900            28225  6 +     75252 ---------------A----------------A--------GTAC---------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 1
s Dasypus_novemcinctus.JH564415.1                          2110238  8 -   2246927 ---------------a----------------tat--------at-t-----------------t-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292690 10 +  12879189 T--------------A----------------T--------GTGT-T-----------------TG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632031 10 -  35494412 G--------------A----------------T--------GTAT-T-----------------TG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330592  9 -   2620052 ---------------a----------------tat--------at-t-----------------tg
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664594 10 -   1390856 t--------------a----------------tat--------gt-t-----------------tg
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139389 10 -    198055 T--------------A----------------T--------ATGT-T-----------------TG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98987  6 -    115145 ---------------A----------------A--------GTAC---------------------
i Dinomys_branickii.DinBra_scaffold_10381                I 11 I 1
s Dipodomys_ordii.KN672350.1                              18950614 22 -  37912305 t--------------g----------------tgt--------gtgtgtgtgtgtgtg------tg
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5548 28 -     10735 t--------------g----------------tgt--------gtgtgtgtgtgtgtgtgtgtgtg
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10485  6 +     14636 ---------------A----------------A--------GTAC---------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 1
s Echinops_telfairi.JH980293.1                            62855209 24 - 111700974 t--------------a----------------tatatatatatat-a-t-aat---------aaaa
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6371 10 +     19438 t--------------a----------------tgt--------at-g-----------------ta
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239843 10 -    607251 t--------------a----------------tat--------at-t-----------------tg
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108857 10 -  10337057 C--------------A----------------T--------ATAT-T-----------------TT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31154 10 +    110024 C--------------A----------------C---------A-TAT----------------CTG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13125 10 +     18970 C--------------A----------------C---------A-TAT----------------CTG
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916233  5 +  41312741 -------------------------------------------gt-t-----------------tg
i Enhydra_lutris.KZ291758.1                              I 10 C 0
s Eptesicus_fuscus.JH977646.1                             12579018  5 +  14770903 -------------------------------------------at-t-----------------tg
i Eptesicus_fuscus.JH977646.1                            I 5 C 0
s Equus_asinus.JREZ01000139.1                              3041474 10 -   4378816 t--------------a----------------tgt--------gt-t-----------------tg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375412 10 +  39960074 T--------------A----------------T--------GTGT-T-----------------TG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             793 10 -      1194 T--------------A----------------T--------GTGT-T-----------------TG
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666178 10 +   7059049 t--------------a----------------ta--------cat-t-----------------tg
i Erinaceus_europaeus.JH835339.1                         I 1 C 0
s Erythrocebus_patas.Contig38                               262988  8 +  21539334 C--------------A----------------C----------GT-T-----------------TG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71241 10 -    133382 T--------------A----------------T--------GTAT-T-----------------TG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202              785 10 -      1170 T--------------A----------------T--------ATAT-T-----------------TG
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               14903 10 -     24895 T--------------A----------------T--------GTGT-T-----------------TG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42613 10 -     70999 T--------------A----------------T--------GTGT-T-----------------TG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86583 10 +    112731 T--------------A----------------T--------GTGT-T-----------------TG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43146 10 +     68309 T--------------A----------------T--------GTGT-T-----------------TG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53470 10 -     65740 T--------------A----------------T--------GTGT-T-----------------TG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24102 10 -     75513 T--------------A----------------T--------GTGT-T-----------------TG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48297 10 -     97555 T--------------A----------------T--------GTGT-T-----------------TG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5021 10 +     30972 T--------------A----------------T--------GTGT-T-----------------TG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42741 10 -     52037 T--------------A----------------T--------GTGT-T-----------------TG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59144 10 -    111500 T--------------A----------------T--------GTGT-T-----------------TG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246926 16 - 206538554 t--------------a----------------cacgtatat--at-t-----------------tg
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116712 16 - 205367284 t--------------a----------------cacgtatat--at-t-----------------tG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27809 16 -     30238 T--------------A----------------C--ACGTATATAT-T-----------------TG
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916526  2 -   3816255 ---------------t----------------g---------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 3
s Galago_moholi.ctg3793                                     125140 16 -    137831 T--------------A-CT-GGTA--------T--------GTGT-T-----------------TG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8685 16 +     22493 T--------------A-CT-GGTA--------T--------GTGT-T-----------------TG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20756 16 -     32986 T--------------A-CT-GGTA--------C--------GTGT-T-----------------TG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1290 10 -     28519 T--------------A----------------T--------ATAT-T-----------------TG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91546 10 -     95226 t--------------a----------------tat--------at-t-----------------tg
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34611 10 -     36801 T--------------A----------------T--------GTAT-T-----------------TG
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5938  8 -      8343 C--------------A----------------C----------GT-T-----------------TG
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254953  8 - 186649187 C--------------A----------------C----------GT-T-----------------TG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2106 10 -     78134 T--------------A----------------T--------GTAT-T-----------------TG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14828 10 -     40692 T--------------A----------------T--------GTGT-T-----------------TA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36230 10 +     49394 T--------------A----------------T--------GTGT-T-----------------TA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61098 10 -     66874 T--------------A----------------T--------GTGT-T-----------------TA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9972 10 -     42923 T--------------A----------------T--------GTGT-T-----------------TA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16972 10 -     53142 T--------------A----------------T--------GTGT-T-----------------TA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30902 16 -    327341 T--------------A----------------C--ATGTATATAT-T-----------------TG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9221 10 +     48891 T--------------A----------------T--------ATAT-T-----------------TG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932495  2 -  22651954 ---------------t----------------a---------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_154059                 557 10 +      4291 T--------------A----------------C--------ATCT-T-----------------TG
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7744 10 -     36432 T--------------A----------------T--------ATAT-T-----------------TG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551736 10 -   1711038 t--------------a----------------tat--------at-a-----------------ta
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1185 10 -      2730 A--------------A----------------A--------ATAT-A-----------------TA
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142962  8 -    630532 C--------------A----------------C----------GT-T-----------------TG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69817 16 +     83186 T--------------A----------------C--ACGTATATAT-T-----------------TG
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71961  6 +    143317 ---------------A----------------A--------GTAC---------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 1
s Hylobates_agilis.k141_1155965                               5996  8 +     12352 C--------------A----------------C----------GT-T-----------------TG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13180  8 +     55766 C--------------A----------------C----------GT-T-----------------TG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052780  8 + 191637585 C--------------A----------------C----------GT-T-----------------TG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801658  8 +  11177569 C--------------A----------------C----------GT-T-----------------TG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4612 18 -    135385 T--------------A----------------T--------ATATAT----------ATATATATA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 8
s Ictidomys_tridecemlineatus.JH393364.1                     386964 10 +   7955117 t--------------a----------------tat--------at-t-----------------tg
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2525 10 +     11955 T--------------A----------------T--------GTGT-T-----------------TG
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10132 10 -     16823 T--------------A----------------T--------ATAT-T-----------------TA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1239951 12 +   9596543 c--------------a----------------ta--------catac----------------ata
i Jaculus_jaculus.JH725527.1                             C 0 I 35
s Kogia_breviceps.KogBre_flattened_line_3970                 71975 10 -     97402 T--------------A----------------T--------ATAT-T-----------------TG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43395 10 +    110728 T--------------A----------------C--------ATGC-T-----------------TG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63013  5 -     65777 -------------------------------------------AT-T-----------------TG
i Lasiurus_borealis.LasBor_scaffold_16567                I 5 C 0
s Lemur_catta.scaffold_24                                 14759621 10 +  30322482 T--------------A----------------T--------GTGT-T-----------------TA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4310 10 -     13097 T--------------A----------------C--------TTGC-T-----------------TG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4064 10 +      5940 T--------------A----------------C--------TTGC-T-----------------TG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3894 10 -      5717 T--------------A----------------C--------TTGC-T-----------------TG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10266 10 -     11567 T--------------A----------------C--------ATGC-T-----------------TG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11647 10 -     12945 T--------------A----------------C--------ATGC-T-----------------TG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9131 10 +     29618 T--------------A----------------T--------GTGT-T-----------------TG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9127 10 +     31569 T--------------A----------------T--------GTGT-T-----------------TG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9137 10 +     24756 T--------------A----------------T--------GTGT-T-----------------TG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9137 10 +     16388 T--------------A----------------T--------GTGT-T-----------------TG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813622  5 -   3914936 -------------------------------------------at-t-----------------tg
i Leptonychotes_weddellii.KB714746.1                     I 6 C 0
s Lepus_americanus.LepAme_scaffold_56121                     17990 10 +     24238 T--------------A----------------T--------GTAT-T-----------------TG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341321 10 +    662738 T--------------A----------------T--------GTAT-T-----------------TG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334016  8 -   1826925 C--------------A----------------C----------GT-T-----------------TG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10712 10 +     19643 T--------------A----------------T--------GTGT-T-----------------TG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5044375 10 -   6120653 T--------------A----------------T--------GTGT-T-----------------TG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39081153 10 +  43346337 T--------------A----------------C--------GTCT-T-----------------TG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614773 14 +  59628241 c--------------a----------------tatatat----tt-t-----------------tg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45410  8 -     61512 C--------------A----------------C----------GT-T-----------------TG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373072  8 -  60120075 C--------------A----------------C----------GT-T-----------------TG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25335  8 +     30207 C--------------A----------------C----------GT-T-----------------TG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           22438  8 -     24934 C--------------A----------------C----------GT-T-----------------TG
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25288  8 +     30527 C--------------A----------------C----------GT-T-----------------TG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36464  8 -     50087 C--------------A----------------C----------GT-T-----------------TG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46208  8 +     51645 C--------------A----------------C----------GT-T-----------------TG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415410  8 - 187317192 C--------------A----------------C----------GT-T-----------------TG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399641  8 +  25927173 C--------------A----------------C----------GT-T-----------------TG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48813  8 -     62418 C--------------A----------------C----------GT-T-----------------TG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1349  8 +     14901 C--------------A----------------C----------GT-T-----------------TG
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45285  8 +     59329 C--------------A----------------C----------GT-T-----------------TG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271193  8 +    668171 C--------------A----------------C----------GT-T-----------------TG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                 1469  8 +      1732 C--------------A----------------C----------GT-T-----------------TG
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2991  8 +     17132 C--------------A----------------C----------GT-T-----------------TG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223364 10 -    270270 T--------------A----------------T--------GTAT-A-----------------TA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322480  8 +  24302211 C--------------A----------------C----------GT-T-----------------TG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357311  8 -    752769 C--------------A----------------C----------GT-T-----------------TG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673665  8 -    737560 --------------------------------tgt--------at-t-----------------tg
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220961  8 +    317179 --------------------------------tgt--------at-t-----------------tg
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501184 10 +  40650429 t--------------a----------------tgt--------at-t-----------------tg
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150507 10 +    207569 T--------------A----------------T--------ATGT-T-----------------TG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26382 14 -     74585 t--------------a----------------tatatat----at-t-----------------tg
i Mellivora_capensis.MelCap_flattened_line_19308         I 33 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50294 11 -    140813 C--------------A----------------C---------AGTAT----------------CTC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429392 11 +  29670104 C--------------A----------------C---------AATAT----------------CTG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87603 10 +     93471 T--------------A----------------T--------ATAT-T-----------------TG
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10433 10 +     17804 T--------------A----------------C--------ATGC-T-----------------TG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10933 10 -     12984 T--------------A----------------C--------ATGC-T-----------------TG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19249 10 -     26561 T--------------A----------------C--------ATGC-T-----------------TG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984738 10 +  93316391 T--------------A----------------T--------GTGT-T-----------------TG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46285 11 +    145209 -------------------------------------------AT-G-----------CAATAAAA
i Microgale_talazaci.MicTal_scaffold_6613                I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185197 10 +    200668 C--------------A----------------T--------ATAT-T-----------------TG
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962593 10 +  27267610 C--------------A----------------C---------A-TAT----------------CTA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363367  5 -   8254450 -------------------------------------------at-t-----------------tg
i Miniopterus_natalensis.LDJU01000034.1                  I 5 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42274  5 -     48117 -------------------------------------------AT-T-----------------TG
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 5 C 0
s Miopithecus_ogouensis.k141_1534655                         22497  8 -     27822 C--------------A----------------C----------GT-T-----------------TG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8633  5 +     27589 -------------------------------------------AT-T-----------------TG
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 6 C 0
s Mirza_zaza.k141_766280                                     52535 10 -     62432 T--------------A----------------T--------GTGT-T-----------------TG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359706 10 +    437263 G--------------A----------------T--------GTAT-T-----------------TG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179419 14 +    366855 T--------------A----------------T----ATATATAT-T-----------------TG
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25667 10 -     82753 T--------------A----------------T--------ATAT-T-----------------TG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18653 16 -     63510 T--------------A----------------C--ACGTATATAT-T-----------------TG
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39331  5 +     47283 -------------------------------------------AT-T-----------------TG
i Murina_feae.MurFea_scaffold_17764                      I 5 C 0
s Mus_caroli.LT608237.1                                   35593320  7 + 120012414 -------------------------------------------atat----------------atg
i Mus_caroli.LT608237.1                                  I 4 C 0
s Mus_musculus.chr8                                       41687706  7 + 129401213 -------------------------------------------atat----------------atg
i Mus_musculus.chr8                                      I 4 C 0
s Mus_spretus.CM004101.1                                  39496999  7 + 130317789 -------------------------------------------atat----------------atg
i Mus_spretus.CM004101.1                                 I 4 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83437 10 -     86153 T--------------A----------------T--------GTAT-T-----------------TG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355265  5 +  14710649 -------------------------------------------gt-t-----------------tg
i Mustela_putorius.JH418006.1                            I 8 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63254  6 +     67721 ---------------A----------------A--------GTAC---------------------
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 11 I 1
s Myotis_brandtii.KE162005.1                               9793621  5 +  10118263 -------------------------------------------at-t-----------------tg
i Myotis_brandtii.KE162005.1                             I 5 C 0
s Myotis_davidii.KB100139.1                                4387751  5 +   6019432 -------------------------------------------at-t-----------------tg
i Myotis_davidii.KB100139.1                              I 5 C 0
s Myotis_lucifugus.GL429869.1                               383578  5 +   4330536 -------------------------------------------at-t-----------------tg
i Myotis_lucifugus.GL429869.1                            I 5 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2387  5 +     18357 -------------------------------------------AT-T-----------------TG
i Myotis_myotis.MyoMyo_scaffold_66571                    I 5 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119891  9 +    130748 ---------------A----------------T--------ATAT-A-----------------TG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946427 12 +   3037898 T--------------C----------------C--------ATATAT----------------CTG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29135  8 +     34575 C--------------A----------------C----------AT-T-----------------TG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232384 10 -   7148211 G--------------A----------------T--------GTAT-T-----------------TG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128393 10 -    149072 T--------------A----------------T--------ATAT-T-----------------TG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53888  8 -    132029 C--------------A----------------C----------GT-T-----------------TG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9983  8 -     16345 C--------------A----------------C----------GT-T-----------------TG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15868  8 +     22201 C--------------A----------------C----------GT-T-----------------TG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414089  8 -  22158432 C--------------A----------------C----------GT-T-----------------TG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26266  8 -     54323 C--------------A----------------C----------GT-T-----------------TG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198369 14 +   9404916 c--------------a----------------tatatat----tt-t-----------------tg
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636740 10 + 196305487 T--------------A----------------T--------GTGT-T-----------------TG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3494 10 -      3937 T--------------A----------------T--------GTGT-T-----------------TG
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93564999 10 - 199412804 T--------------A----------------T--------GTGT-T-----------------TG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557051 10 -   3988456 N--------------N----------------N--------NNNN-N-----------------NN
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055203  6 -  11899542 ---------------A----------------A--------ATAC---------------------
i Octodon_degus.JH651603.1                               I 11 I 1
s Odobenus_rosmarus.KB229312.1                             1451831 14 +   2017862 t--------------a----------------tatatat----at-t-----------------tg
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436437 10 -    630418 t--------------a----------------tat--------at-t-----------------tg
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14429 10 +    150152 t--------------a----------------tat--------at-t-----------------tg
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92949 11 -    140218 C--------------A----------------C--------AA-TAT----------------CTG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3830 11 -     41509 C--------------A----------------C---------AATAT----------------CTG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8102774 10 +  10937097 G--------------A----------------T--------ATAT-T-----------------TG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13959 10 -     14239 C--------------A----------------T--------ATAT-T-----------------TG
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103787 10 - 174332312 t--------------a----------------tat--------at-t-----------------tg
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39414 14 +    559221 c--------------a----------------tatatat----tt-t-----------------tg
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40302 16 -     51505 T--------------ACCGGTA----------T--------GTGT-T-----------------TG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             353305 16 +   1103335 T--------------A-CT-GGTA--------T--------GTGT-T-----------------TG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404341 10 -  44047080 t--------------a----------------tat--------at-t-----------------tg
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4860 10 +     17875 T--------------A----------------T--------ATAT-T-----------------TG
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472982  8 - 189151597 C--------------A----------------C----------GT-T-----------------TG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24632 16 -    230217 T--------------A----------------C--ACGAATATAT-T-----------------TG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461958 16 -  18783137 T--------------A----------------C--ACGAATATAT-T-----------------TG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972617 16 +   8748460 T--------------A----------------C--ACGAATATAT-T-----------------TG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615869 10 +   2937107 t--------------a----------------tat--------at-t-----------------tg
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243313  8 - 183742232 C--------------A----------------C----------GT-T-----------------TG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9775  8 +     21308 C--------------A----------------C----------GT-T-----------------TG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292348  8 -  20919399 C--------------A----------------C----------GT-T-----------------TG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22423  8 -     27687 C--------------A----------------C----------GT-T-----------------TG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15569  8 +     16796 C--------------A----------------C----------GT-T-----------------TG
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22380  8 -     23640 C--------------A----------------C----------GT-T-----------------TG
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15233 16 +     78924 T--------------A----------------C--ACGTTTATAT-T-----------------TG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26499 10 +     31479 T--------------A----------------T--------GTGT-T-----------------TG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18869 10 -     24908 T--------------A----------------T--------GTGT-T-----------------TG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        1940 22 +      9367 t--------------g----------------tgt--------gtgtgtgtgtgtgtg------cg
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247026 11 +  18517816 C--------------A----------------C---------AGTAT----------------CTG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32090  2 -     56120 ---------------T----------------C---------------------------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 13
s Phocoena_phocoena.PhoPho_flattened_line_24159               4300 10 -     63832 G--------------A----------------T--------GTAT-T-----------------TG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2593  8 +     55023 C--------------A----------------C----------AT-T-----------------TG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2143  8 -     89929 C--------------A----------------C----------AT-T-----------------TG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2732  8 +     40849 C--------------A----------------C----------AT-T-----------------TG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254396  8 +  14605196 C--------------A----------------C----------AT-T-----------------TG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3926  5 +     22231 -------------------------------------------AT-T-----------------TG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 5 C 0
s Pithecia_albicans.k141_1239476                             65017 10 +    207309 T--------------A----------------C--------ATGC-T-----------------TG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6109 10 -     25401 T--------------A----------------C--------ATGC-T-----------------TG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31853 10 +     58159 T--------------A----------------C--------ATGC-T-----------------TG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32129 10 +     63561 T--------------A----------------C--------ATGC-T-----------------TG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31889 10 +     51148 T--------------A----------------C--------ATGC-T-----------------TG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556859 10 -   4542175 T--------------A----------------C--------ATGC-T-----------------TG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31873 10 +     51125 T--------------A----------------C--------ATGC-T-----------------TG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1298 10 +     19503 T--------------A----------------T--------ATAT-T-----------------TG
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8284 10 +     39866 T--------------A----------------C--------ATGC-T-----------------TG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3366 10 -      9282 T--------------A----------------C--------ATGC-T-----------------TG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42770 10 -     87950 T--------------A----------------C--------ATGC-T-----------------TG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43166 10 -     88961 T--------------A----------------C--------ATGC-T-----------------TG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7862 10 -     39403 T--------------A----------------C--------ATGC-T-----------------TG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42813 10 +     87928 T--------------A----------------C--------ATGC-T-----------------TG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7861 10 -     60166 T--------------A----------------C--------ATGC-T-----------------TG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14798 10 -     67232 T--------------A----------------C--------ATGC-T-----------------TG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42714 10 -     90634 T--------------A----------------C--------ATGC-T-----------------TG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44181 10 +     89403 T--------------A----------------C--------ATGC-T-----------------TG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178091  8 - 189387572 C--------------A----------------C----------GT-T-----------------TG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192908  8 -   9816681 C--------------A----------------C----------GT-T-----------------TG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              27718  8 +     69807 C--------------A----------------C----------AT-T-----------------TG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44904  8 -     80239 C--------------A----------------C----------AT-T-----------------TG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                  330 10 +      7663 T--------------A----------------C--------GTCT-T-----------------TG
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 3
s Prolemur_simus.MPIZ01000396.1                            1982769 10 +   4620579 t--------------a----------------tgt--------gT-T-----------------TA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566276 10 -   2598838 T--------------A----------------T--------GTGT-C-----------------TG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3914 10 -      7103 T--------------A----------------T--------GTGT-T-----------------TG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4511 10 -     11706 T--------------A----------------T--------GTGT-T-----------------TG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8249 10 -     30655 T--------------A----------------T--------GTGT-T-----------------TG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34562 10 +     46564 T--------------A----------------T--------GTGT-T-----------------TG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94841 10 -     98465 T--------------A----------------T--------GTGT-T-----------------TG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8480 10 +     35169 T--------------A----------------T--------GTGT-T-----------------TG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37636 11 +     52041 C--------------A----------------C---------AGTAT----------------CTC
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52309 18 -     66298 t--------------a----------------tacacacacacgt-t-----------------tG
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4838  5 -     18639 -------------------------------------------GT-T-----------------TG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 14 C 0
s Pteropus_alecto.KB030862.1                               5841023 10 -  28871421 t--------------a----------------tgt--------at-a-----------------ta
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537538 10 -   4952924 t--------------a----------------tgt--------at-a-----------------ta
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099275 16 +  38429054 T--------------A----------------C--ACGTATATAT-T-----------------TG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27092  8 +     91421 C--------------A----------------C----------AT-T-----------------TG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153584  8 -   7812017 C--------------A----------------C----------AT-T-----------------TG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7959  8 +     72585 C--------------A----------------C----------AT-T-----------------TG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53356 10 +     55069 T--------------A----------------T--------ATAT-T-----------------TG
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022923  7 -  90668790 -------------------------------------------GTAT----------------CTG
i Rattus_norvegicus.chr16                                I 2 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914900 10 +   3329780 t--------------a----------------ta-a-------at-a-----------------ta
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             1665  8 +      7119 C--------------A----------------C----------AT-T-----------------TG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122272  8 + 195417433 C--------------A----------------C----------AT-T-----------------TG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236515  8 -   7961872 C--------------A----------------C----------AT-T-----------------TG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74956 10 -    116970 T--------------A----------------T--------GTAT-A-----------------TA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4173 10 +     27962 T--------------A----------------C--------TTGC-T-----------------TG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4068 10 +      6077 T--------------A----------------C--------TTGC-T-----------------TG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4158 10 +      5971 T--------------A----------------C--------TTGC-T-----------------TG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4079 10 +      5932 T--------------A----------------C--------TTGC-T-----------------TG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2421 10 -      4390 T--------------A----------------C--------TTGC-T-----------------TG
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391858 10 - 209938924 T--------------A----------------C--------TTGC-T-----------------TG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4028 10 +      5979 T--------------A----------------C--------TTGC-T-----------------TG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                597 10 -     22275 T--------------A----------------C--------TTGC-T-----------------TG
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8029 10 +     16473 T--------------A----------------T--------ATAT-T-----------------TG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109195 10 + 121099817 T--------------A----------------T--------ATGC-T-----------------TG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30762 10 -     47369 T--------------A----------------T--------ATGC-T-----------------TG
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31148 10 -     79414 T--------------A----------------T--------ATGC-T-----------------TG
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27839 10 -     34454 T--------------A----------------T--------ATGC-T-----------------TG
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15240 10 -     22428 T--------------A----------------T--------ATGC-T-----------------TG
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30394 10 -     47109 T--------------A----------------T--------ATGC-T-----------------TG
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238446 10 +   5703754 T--------------A----------------C--------ATGC-T-----------------TG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8036 10 +     21866 T--------------A----------------C--------ATGC-T-----------------TG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116072 14 +    313613 T--------------ATATA------------T--------ATAT-T-----------------TG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25411  8 +     27374 C--------------A----------------C----------AT-T-----------------TG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28925  8 +     58920 C--------------A----------------C----------AT-T-----------------TG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15421  8 -     45317 C--------------A----------------C----------AT-T-----------------TG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23080  8 -     42441 C--------------A----------------C----------AT-T-----------------TG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25758  8 -     29113 C--------------A----------------C----------AT-T-----------------TG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28832  8 -     48123 C--------------A----------------C----------AT-T-----------------TG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49405 11 +     77746 T--------------A----------------C---------AGTAT----------------CTG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864354  8 -   1910179 --------------------------------T--------GTAT-T-----------------TA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671505 10 +  18376816 C--------------A----------------A--------GCAT-T-----------------TG
i Sorex_araneus.JH798187.1                               I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1868543 10 +   3870691 t--------------a----------------tat--------at-t-----------------tg
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6913 14 -     97271 T--------------A----------------T----ATATATAT-T-----------------TG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125055 16 +    196729 T--------------A----------------C--ATGTATATAT-T-----------------TG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643946 10 +  69701581 t--------------a----------------tat--------at-t-----------------tg
i Sus_scrofa.CM000828.4                                  I 2 C 0
s Symphalangus_syndactylus.tarseq_199                       391350  8 +   1523678 C--------------A----------------C----------GT-T-----------------TG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14485  9 +     22964 ---------------A----------------T--------ATAT-T-----------------TG
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2880  9 +      5583 ---------------A----------------T--------ACAT-A-----------------TG
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191788 10 +    199430 T--------------A----------------T--------ATGT-T-----------------TG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105758 10 -    539355 T--------------A----------------T--------ATGT-T-----------------TG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 817 18 +      9917 T--------------ATATATATA--------T--------ATAT-T-----------------TG
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7607 26 +     20590 T--------------ATATATATATATATATAT--------ATAT-T-----------------TG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353299  8 - 186847797 C--------------A----------------C----------GT-T-----------------TG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24247  2 -     33621 ---------------T----------------A---------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 14
s Tolypeutes_matacus.TolMat_scaffold_31955                   19978  8 -     31044 ---------------A----------------T--------ATAT-T-----------------T-
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480314 10 -    610378 T--------------A----------------T--------ACAT-T-----------------TG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20957  8 +     26378 C--------------A----------------C----------AT-T-----------------TG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33635  8 -     78344 C--------------A----------------C----------AT-T-----------------TG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20282  8 +     25722 C--------------A----------------C----------AT-T-----------------TG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28588  8 -     62838 C--------------A----------------C----------AT-T-----------------TG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           28633  8 +     46913 C--------------A----------------C----------AT-T-----------------TG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9440  8 -     28527 C--------------A----------------C----------AT-T-----------------TG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30524  8 -     64340 C--------------A----------------C----------AT-T-----------------TG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28561  8 -     63452 C--------------A----------------C----------AT-T-----------------TG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10007  8 +     22490 C--------------A----------------C----------AT-T-----------------TG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3432  8 -      6147 C--------------A----------------C----------AT-T-----------------TG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10337  8 -     13050 C--------------A----------------C----------AT-T-----------------TG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255577  8 -   6242583 C--------------A----------------C----------AT-T-----------------TG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1601  8 +     19340 C--------------A----------------C----------AT-T-----------------TG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173642 10 -    200418 T--------------A----------------T--------GTAT-T-----------------TG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480620 10 -  10818551 t--------------a----------------tat--------at-t-----------------tg
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834290 10 -   4065304 T--------------A----------------T--------ATGT-T-----------------TG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8313 10 -     70247 T--------------A----------------T--------ATGT-T-----------------TG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17365887 10 -  33153633 G--------------G----------------T--------ATAT-T-----------------TG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3813 10 -     21056 T--------------G----------------T--------ATAT-T-----------------TG
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182001 14 +   5085361 t--------------a----------------tacatat----at-t-----------------tg
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25417 10 -     30710 T--------------A----------------T--------GTGT-T-----------------TG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24324 10 -    147434 T--------------A----------------T--------GTGT-T-----------------TG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76474 10 +   5488506 t--------------a----------------tat--------at-t-----------------tg
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105135 14 -    112863 C--------------A----------------T----ATATATTT-T-----------------TG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174330 10 -    224448 T--------------G----------------C--------ATAT-T-----------------TG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29025 28 -     86975 tatatatatatatata----------------tatatat----at-T-----------------TG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_501999                       798 12 -       833 t--------------g----------------tat--------atgtg----------------tg
i Zapus_hudsonius.ZapHud_scaffold_501999                 C 0 N 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1178 10 +      2126 T--------------A----------------T--------ATAT-T-----------------TG
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Allactaga_bullata.AllBul_scaffold_20030                    18241 14 -     61208 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5646 25 +     36723 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
s Acinonyx_jubatus.LLWD01001279.1                           813033 29 +   1699592 tg--------------a--a----at----------------AGCAT---TGG-CA-GAATATTT-AATCA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25314 24 +     63021 T---------------T--A---TAT----------------AATAT---TGG-TG-GAATA------TTG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 5
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415500 29 +  29979442 tg--------------A--A----AT----------------AGCAT---TGG-CA-GAATATT-Aaatca
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215837 29 +    347723 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATT-Aaatca
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18255 24 -     61208 TG--------------T--A---TGT----------------AGCAT---TGG-AA-T-GTA------TCA
i Allactaga_bullata.AllBul_scaffold_20030                I 14 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47962 25 +     53615 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43944 25 +     44087 TG--------------A--A---TGT----------------AGCGT---TGG-TA-GAATA------TCA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16552 25 -     21945 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18235 25 +     32033 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72400 25 -     84148 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44639 25 -     78289 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44078 25 +     55831 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42528 25 -     64179 TG--------------A--A---TAA----------------AGCGT---TGG-TA-GAATA------TCG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24162 25 -     24835 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41153 25 +     45454 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46802 25 +     70886 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              8975 25 +     30854 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33109 25 +     42133 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585484 29 +   2318259 tg--------------a--a----at----------------aGCAT---TGG-TA-GAATATTT-aatca
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177283 29 -    412891 TG--------------A--A----AT----------------AACAT---TGG-CA-GAATATTT-aatca
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50590 29 -     68529 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAATATTT-aatca
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1356 25 +     17741 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             1981 25 -     15923 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672263 25 +   5030052 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2257 25 -     16391 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1816 25 -     17186 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16174 26 -     32367 TG--------------A-AA---TAT----------------AACAT---TGG-TA-GAATA------TCA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19714 25 -     45910 CG--------------A--A---TAT----------------AGTAT---TGG-TA-GGAGa------tca
i Arctocebus_calabarensis.k141_1364444                   C 0 I 9
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5550 29 -     15198 TG--------------A--A----AT----------------AACAT---TGG-CA-GAATATTT-CATCA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274854 25 +  21539123 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11020 25 +     48076 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6157 25 -     28759 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33711 25 +     44353 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49080 25 -     71267 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23140 25 -     33135 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TCG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6392 24 +     11645 TG--------------A--A---TAT----------------AGCAT---Tgg-ta-gaa-a------tca
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6400 24 -     19611 TG--------------A--A---TAT----------------AGCAT---TGG-TA-Gaa-a------tca
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963634 29 -  23207421 tg--------------a--a----aT----------------AGCAT---TGG-TA-GAGTATTT-aatca
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          134 29 -     25979 tg--------------a--a----AT----------------AGCAT---TGG-TA-GAGTATTT-aatca
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86492 29 +    124022 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAATATTT-aatca
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22025 29 +    288883 tg--------------a--a----at----------------AGCAT---TGG-TA-GAATATTT-aatca
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356417 29 +  48749331 tg--------------a--a----at----------------AGCAT---TGG-TA-GAATATTT-aatca
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      754981 29 +   1948126 tg--------------a--a----at----------------aGCAT---TGG-TA-GAATATTT-aatca
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545123 29 -  45695690 tg--------------a--a----at----------------AGCAT---TGG-TA-GAATATTT-aatca
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530144 29 -   4408762 tg--------------a--a----at----------------AGCAT---TGG-TA-TAACATTT-aatca
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8029 25 +     28062 TG--------------A--A---TAA----------------AGCAT---GAG-TA-GAATA------GCG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43323 25 -     91139 TG--------------A--A---TAA----------------AGCAT---GGG-TA-GAATA------GCG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20849 25 +     95584 TG--------------A--A---TAA----------------AGCAT---GAG-TA-GAATA------GCG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20762 25 +    119600 TG--------------A--A---TAA----------------AGCAT---GAG-TA-GAATA------GCG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10336 25 +     18648 TG--------------A--A---TGA----------------AGCAT---TGT-TA-GAATA------TCG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9871 25 -     13885 TG--------------A--A---TGA----------------AGCAT---TGT-TA-GAATA------TCG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1941 25 -      8861 TG--------------A--A---TGA----------------AGCAT---TGT-TA-GAATA------TCG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454333 25 + 189096842 TG--------------A--A---TGA----------------AGCAT---TGT-TA-GAATA------TCG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1856 25 +      8664 TG--------------A--A---TGA----------------AGCAT---TGT-TA-GAATA------TCG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631151 29 +  17673402 ta--------------a--a----at----------------atcat---TGG-TA-GAATATTT-AAGCA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665437 29 +   7040546 ta--------------a--a----at----------------atcat---TGG-TA-GAATATTT-AAGCA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209097 29 +   1652518 ta--------------a--a----at----------------atcat---TGG-TA-GAATATTT-AAGCA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505518 29 +  60362399 TG--------------A--A----AT----------------AGCAT---TGA-TA-GAATATT-Aaatca
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9154 29 -     23171 TG--------------A--A----AT----------------AGCAT---TGA-TA-GAATATT-AAATCA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222497 29 +   9314153 tg--------------a--a----at----------------aGCAT---TGA-TA-GAATATT-AAATCA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615632 29 +  59632846 tg--------------a--a----at----------------aGCAT---TGA-TA-GAATATT-Aaatca
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107213 29 -  63665305 tg--------------a--a----at----------------aGCAT---TGA-TA-GAATATT-AAATCA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409213 29 -  46296322 tg--------------a--a----at----------------aGCAT---TGG-CA-GAATATTT-aatca
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591487 29 +  44709034 tg--------------a--a----aT----------------AGCAT---TGG-CA-GAATATTT-aatca
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1682 22 -      1880 AG--------------A--G---TAT----------------AGCAT---TGG-TA-AAATA---------
i Capromys_pilorides.CapPil_scaffold_652123              I 1 C 0
s Carlito_syrichta.NW_007259797.1                           270603 25 +    496798 tg--------------a--a---tat----------------AGCAG---TGG-TA-GAAAA------TCA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                408 29 +      9923 TG--------------A--A----AT----------------AACAT---TGG-CA-GAATATTT-AACCA
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27825 10 -     39886 ------------------------------------------------------TT-GACTa------tca
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 14
s Catagonus_wagneri.CatWag_scaffold_2839                     79687 28 -    217609 TG--------------G--A----AT----------------AGCAT---TGG-TA-GAATATT--aatca
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996533 25 +  23392119 AG--------------A--G---TAT----------------AGCAT---TGA-TA-Gaata------tca
i Cavia_aperea.AVPZ01000300.1                            I 1 I 20
s Cavia_porcellus.DS562891.1                               4999975 25 +  23407841 AG--------------A--G---TAT----------------AGCAT---TGA-TA-Gaata------tca
i Cavia_porcellus.DS562891.1                             I 1 I 20
s Cavia_tschudii.CavTsc_scaffold_23560                       63056 25 -     66877 AG--------------A--G---TAT----------------AGCAT---TGA-TA-GAATA------TCA
i Cavia_tschudii.CavTsc_scaffold_23560                   I 1 I 20
s Cebuella_niveiventris.k141_592277                           5254 25 -     12580 TG--------------A--A---TGA----------------AGCAT---TGT-TA-GAATA------TCG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43312 25 +     53515 TG--------------A--A---TGA----------------AGCAT---TGT-TA-GAATA------TCG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371240 25 -  26074798 TG--------------A--A---TAA----------------AGCAT---TGG-TG-GAATA------TCG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8129 25 -     34880 TG--------------A--A---TAA----------------AGCAT---TGG-TG-GAATA------TCG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67224 25 -     89041 TG--------------A--A---TAA----------------AGCAT---TGG-TG-GAATA------TCG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2565 25 -      5494 TG--------------A--A---TAT----------------AACAG---TGG-TA-GAAAA------TCA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492322 29 -  27778364 cG--------------A--A----AG----------------AGCAT---TGG-TA-GAATATTT-aatca
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19155 29 +     27315 CG--------------A--A----AG----------------AGCAT---TGG-TA-GAATATTT-aatca
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141139 25 -   4669795 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44881 25 +     47900 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44705 25 -     44860 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44694 25 -    148725 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26881 25 -     40656 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6847 25 +     20796 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11964 25 -     17524 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27686 25 -     34525 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11468 25 -     25376 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364063 25 -  39242232 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269780 25 +  21565898 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32153 25 -     45857 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27052 25 -     32606 TG--------------A--A---TAT----------------AGTGT---TGG-TA-GAATA------TCA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3211 25 +      8499 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25608 25 +     70610 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22578 25 +     36323 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12896 30 -     19938 TG--------------A--A---TGT----------------AGCAT---TAG-TA-GAATATTT-AATCA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30765 25 -     33796 TG--------------A--A---TAT----------------AGCAC---TGG-TA-GAATA------TCA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5282 25 -     15404 TG--------------A--A---TAT----------------AGCAC---TGG-ta-gaata------gca
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9129 25 -     32913 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATT------CCA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19542 25 -     40346 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATT------CCA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19797 25 +    216457 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATT------CCA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19590 25 +     39636 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATT------CCA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238908 25 -   2543920 AG--------------A--G---TAC----------------AGCAT---Tgg-ta-gacta------tca
i Chinchilla_lanigera.JH722012.1                         I 1 C 0
s Chiropotes_albinasus.k141_1946120                           4185 25 +      5346 TG--------------A--A---TAA----------------AGCAT---TGT-TA-GAATA------TCG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42660 25 -    112038 TG--------------A--A---TGA----------------AGCGT---Ggg-ta-gaata------gca
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8231 25 +     34062 TG--------------A--A---TGA----------------AGCAT---GGG-TA-GAATA------GCA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343468 25 +  18827391 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10016 25 -     44032 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304793 25 - 135778131 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14937 30 +     15858 TG--------------A--A---GGT----------------AGTAC---TGG-TA-GAATATTT-CATCA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606512 30 -    839153 tg--------------a--a---gGT----------------AGTAC---TGG-TA-GAATATTT-CATCA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                942 30 +      2406 TG--------------A--A---TAT----------------AGTAT---TGG-TA-GAACAGTT-aatcg
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409218 25 -   2368649 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379094 25 - 200372422 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TTG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2643 25 -     84244 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807393 29 +  53390261 ta--------------a--g----at----------------AGCAT---TGG-TA-GAATATTT-AAttg
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2911 29 -      8242 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATTT-aatta
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44453 24 -     83289 T---------------T--A---TAA----------------ACAAT---TGG-TG-GAACA------TTG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115017 24 - 224834208 T---------------T--A---TAT----------------AACAT---TAG-TG-AACTA------TTG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9600 25 +     12657 CA--------------A--A----AA----------------TGCTT---ATA-TA-GACTAT-----TTG
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4486 29 +     87169 TG--------------A--A----AT----------------AGCAC---TGG-CA-GAATATTT-AATCA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645144 25 -   1526836 TG--------------A--A---TAT----------------AGCAC---TGG-TA-GAATA------TTA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18474 22 +     50838 AG--------------A--G---TAC----------------AGCAT---Tgg-ta-aaaca---------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 1 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4455 25 +     36344 GG--------------A--G---TAT----------------AGCAT---TGA-TA-GACCA------TCG
i Cuniculus_paca.CunPac_flattened_line_7025              I 1 I 30
s Dasyprocta_punctata.DasPun_flattened_line_15900            28232 25 +     75252 GG--------------A--G---TAT----------------AGTGT---TGA-TA-GAATA------TCA
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 1 I 33
s Dasypus_novemcinctus.JH564415.1                          2110246 30 -   2246927 tg--------------a--a---tgt----------------agcat---taG-TA-GAATAGTT-AACCA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292700 25 +  12879189 TG--------------A--A---TAT----------------AGCTT---Tgg-ta-gaata------tca
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632041 29 -  35494412 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAGTATTT-aatca
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330601 29 -   2620052 tg--------------a--a----at----------------acCAT---TGG-CA-GAATATTT-AATCA
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664604 29 -   1390856 cG--------------A--A----AG----------------AGCAT---TGG-TA-GAATATTT-aatca
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139399 29 -    198055 CG--------------A--A----AG----------------AGCAT---TGG-TA-GAATATTT-aatca
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    98994 25 -    115145 AG--------------A--G---TAT----------------AGCAT---Tgg-ta-gaata------tca
i Dinomys_branickii.DinBra_scaffold_10381                I 1 C 0
s Dipodomys_ordii.KN672350.1                              18950636 25 -  37912305 tg--------------t--g---tat----------------agtat---tgG-TA-GAATA------TCA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5576 25 -     10735 tg--------------t--g---tgt----------------agcat---tgg-ta-gaata------tca
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10492 25 +     14636 AG--------------A--G---TAC----------------AACAT---TGA-TA-GAATA------TCA
i Dolichotis_patagonum.DolPat_scaffold_80628             I 1 I 34
s Echinops_telfairi.JH980293.1                            62855233 39 - 111700974 tg--------------a--a--a--taaaaaatgccaCACAG-ACAT---TGG-T------AATT-aatca
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6381 29 +     19438 tg--------------a--a----at----------------aGCAT---TGG-CA-GAATATTT-AATCG
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239853 29 -    607251 tg--------------a--a----at----------------aGGAT---TGG-TA-GAATATTT-aatca
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108867 30 -  10337057 TG--------------A--A---TAT----------------GGAAT---TAG-TA-GACCACTT-aatct
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31164 26 +    110024 T---------------TCTC---TAT----------------AACAT---TTG-TA-GAATA------TTG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13135 26 +     18970 T---------------TCTC---TAT----------------AACAT---TTG-TG-GAATA------TTG
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916238 29 +  41312741 tg--------------a--a----AT----------------AGCAT---TGG-CA-GAATATT-AGATTA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579023 29 +  14770903 tg--------------a--a----at----------------atCAT---TGG-CA-GAATCTTT-agtca
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041484 29 -   4378816 tg--------------A--A----AT----------------AGCGT---TGG-TA-GAATATTT-AATCG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375422 29 +  39960074 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAATATTT-AATCA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             803 29 -      1194 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAATATTT-AATCG
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666188 29 +   7059049 cA--------------A--A----AT----------------GGCAT---TGG-TA-GACTATTT-AATTG
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               262996 25 +  21539334 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71251 29 -    133382 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAGTATTT-aatca
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202              795 29 -      1170 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAGTATTT-aatca
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               14913 25 -     24895 TG--------------A--A---TAT----------------AGCAT---TGG-TA-Gaaca------tca
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42623 25 -     70999 TG--------------A--A---TAT----------------AGCAT---TGG-TA-Gaaca------tca
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86593 25 +    112731 TG--------------A--A---TAT----------------AGCAT---TGG-ta-gaaca------tca
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43156 25 +     68309 TG--------------A--A---TAT----------------AGCAT---TGG-ta-gaaca------tca
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53480 25 -     65740 TG--------------A--A---TAT----------------AGCAT---TGG-TA-Gaaca------tca
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24112 25 -     75513 TG--------------A--A---TAT----------------AGCAT---TGG-ta-gaaca------tca
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48307 25 -     97555 TG--------------A--A---TAT----------------AGCAT---TGG-ta-gaaca------tca
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5031 25 +     30972 TG--------------A--A---TAT----------------AGCAT---Tgg-ta-gaaca------tca
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42751 25 -     52037 TG--------------A--A---TAT----------------AGCAT---TGG-TA-Gaaca------tca
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59154 25 -    111500 TG--------------A--A---TAT----------------AGCAC---TGG-TA-Gaaca------tca
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246942 29 - 206538554 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATTT-AATCA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116728 29 - 205367284 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATTT-AATCA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27825 29 -     30238 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATTT-AATCA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916531  3 -   3816255 ----------------------------------------------------g-tg---------------
i Fukomys_damarensis.KN121974.1                          I 3 I 42
s Galago_moholi.ctg3793                                     125156 25 -    137831 TG--------------A--A---TAT----------------AGTAT---TGG-TG-GGAGa------tca
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8701 25 +     22493 TG--------------A--A---TAT----------------AGTAT---TGG-CG-GGAGa------tca
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20772 25 -     32986 TG--------------A--A---TAT----------------AGTAT---TGG-CA-GGAGa------tca
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1300 25 -     28519 TG--------------A--A---TAT----------------AGCAT---TGT-TA-GAATA------CAA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91556 29 -     95226 tg--------------a--a----at----------------aGCAT---TGG-TA-GAATATTT-aatca
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34621 25 -     36801 TG--------------A--A---CAT----------------AGTAT---TAG-TA-GAATa------tca
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               5946 25 -      8343 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254961 25 - 186649187 TG--------------A--A---TAT----------------AGCAT---Tgg-ta-gaata------tca
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2116 25 -     78134 TG--------------A--A---TAT----------------AGCAT---TAG-TA-Gagta------tca
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14838 25 -     40692 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATa------tca
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36240 25 +     49394 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATa------tca
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61108 25 -     66874 TG--------------A--A---TAT----------------AGCAT---TGG-ta-gaata------tca
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                          9982 25 -     42923 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATa------tca
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         16982 25 -     53142 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATa------tca
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30918 28 -    327341 TG--------------A--A----AT----------------AGCAT---TAG-CA-GAGTATT--AATCA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9231 29 +     48891 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAATATTT-aatca
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                 570 11 +      4291 -----------------------------------------------------------ATATTT-AGTCT
i Heterohyrax_brucei.HetBruBak_scaffold_154059           I 3 C 0
s Heterocephalus_glaber.JH602082.1                         1932500  3 -  22651954 ----------------------------------------------------a-ta---------------
i Heterocephalus_glaber.JH602082.1                       I 3 I 48
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7754 29 -     36432 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAATATTT-aatca
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551746 29 -   1711038 tg--------------g--a----at----------------agcAT---TGG-CA-GAATATTT-agtca
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1195 29 -      2730 TG--------------G--A----AT----------------AGCAT---TGG-CC-GAATATTT-agtta
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142970 25 -    630532 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69833 29 +     83186 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATTT-AATCa
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            71968 25 +    143317 AC--------------A--G---TAT----------------AGCAT---TGA-TA-GAATA------TTA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 1 I 23
s Hylobates_agilis.k141_1155965                               6004 25 +     12352 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13188 25 +     55766 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052788 25 + 191637585 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801666 25 +  11177569 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4638 18 -    135385 ------------------------------------------AACAT---TAG-ta-gacta------tca
i Hystrix_cristata.HysCri_scaffold_5660                  I 8 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386974 25 +   7955117 tg--------------a--a---tat----------------agCAT---TGG-TA-GGATa------tca
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2535 25 +     11955 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10142 29 -     16823 TG--------------A--A----AT----------------AGTAT---TGG-TA-GAGTATTT-aatca
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1239998 24 +   9596543 tg--------------A--A---TGT----------------AGCAT---TGG-AA-G-GTA------TCA
i Jaculus_jaculus.JH725527.1                             I 35 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 71985 29 -     97402 TG--------------A--G----AT----------------AGCAT---TGG-TA-GAGTATTT-aatca
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43405 25 +    110728 TG--------------A--A---TAA----------------AACGT---TGG-CA-GAATA------TCG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63018 29 -     65777 TG--------------A--A----AT----------------ATCAT---TGG-CA-GGATa-tgaaatca
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 57
s Lemur_catta.scaffold_24                                 14759631 25 +  30322482 TG--------------A--A---TAC----------------AGCAT---TGG-ta-gaata------tca
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4320 25 -     13097 TG--------------A--A---TAA----------------AGCAT---TGT-TA-GAATA------TCG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4074 25 +      5940 TG--------------A--A---TAA----------------AGCAT---TGT-TA-GAATA------TCG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3904 25 -      5717 TG--------------A--A---TAA----------------AGCAT---TGT-TA-GAATA------TCG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10276 25 -     11567 TG--------------A--A---TGA----------------AGCAT---TGT-TA-GAATA------TCC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11657 25 -     12945 TG--------------A--A---TGA----------------AGCAT---TGT-TA-GAATA------TCC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9141 25 +     29618 TG--------------A--G---TAT----------------AGCAT---Tgg-ta-gaata------tca
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9137 25 +     31569 TG--------------A--G---TAT----------------AGCAT---TGg-ta-gaata------tca
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9147 25 +     24756 TG--------------A--A---TAT----------------AGCAT---TGg-ta-gaata------tca
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9147 25 +     16388 TG--------------A--G---TAT----------------AGCAT---TGg-ta-gaata------tca
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813627 29 -   3914936 tg--------------a--a----at----------------aacaT---TGG-CA-GAATATT-Aaatta
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18000 25 +     24238 TG--------------A--A---TAT----------------AGAAT---TGG-TA-GAATA------TCA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341331 29 +    662738 TG--------------A--A----AT----------------AGGAT---TGG-TA-GAGTATTT-aatca
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334024 25 -   1826925 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10722 25 +     19643 TG--------------A--A---TAT----------------AGTAT---TGG-TA-GGAGa------tca
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5044385 25 -   6120653 TG--------------A--A---TAT----------------AGTAT---TGG-TA-GGAGa------tca
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39081163 30 +  43346337 TG--------------A--A---CAC----------------AACAT---TGG-TA-GAATATTT-aatct
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614787 29 +  59628241 tg--------------a--a----at----------------agCAT---TGA-TA-GAATATT-Aaatca
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45418 25 -     61512 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373080 25 -  60120075 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25343 25 +     30207 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           22446 25 -     24934 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25296 25 +     30527 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36472 25 -     50087 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46216 25 +     51645 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415418 25 - 187317192 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399649 25 +  25927173 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48821 25 -     62418 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1357 25 +     14901 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45293 25 +     59329 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271201 25 +    668171 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                 1477 25 +      1732 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 2999 25 +     17132 TG--------------A--A---TAC----------------AGCAT---TGG-TA-GAATA------TCA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223374 29 -    270270 TG--------------A--A----AT----------------TGCAT---TGG-CA-GAATATTT-AATCA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322488 25 +  24302211 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357319 25 -    752769 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673673 29 -    737560 tg--------------a--a----aT----------------AGCAT---TGG-TA-GAATATTT-aatca
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220969 29 +    317179 tg--------------a--a----aT----------------AGCAT---TGA-TA-GAATATTT-aatca
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501194 25 +  40650429 tg--------------a--a---TAT----------------AGCAT---TGG-TA-GGATa------tca
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150517 30 +    207569 TG--------------A--A----AT----------------AGCAC---GGG-CA-GAATATTTTaatca
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26396 29 -     74585 tG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATT-AAAGTA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50305 24 -    140813 T---------------T--A---TAT----------------AACAT---TGG-TA-GAATA------TTG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429403 24 +  29670104 T---------------T--A---TAT----------------AACAT---TAG-TG-GACTA------TTG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87613 29 +     93471 TG--------------A--A----AC----------------AGCAT---TGG-TA-GAGTATTT-aatca
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10443 25 +     17804 TG--------------A--A---TGA----------------AGCAT---TGT-TA-GAATA------TCG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10943 25 -     12984 TG--------------A--A---TGA----------------AGCAT---TGT-TA-GAATA------TCG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19259 25 -     26561 TG--------------A--A---TGA----------------AGCAT---TGT-TA-GAATA------TCG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984748 25 +  93316391 TG--------------A--A---TGT----------------AGCGC---TGG-TA-GAata------tca
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46296 41 +    145209 TT--------------A--AA----T-AAAAATAACACACAT-ATATGACTGG-T------ATTT-aatca
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185207 29 +    200668 TG--------------A--A----AT----------------AACAT---TGG-CA-GAATATTT-aatca
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962603 26 +  27267610 T---------------TCTA---TAT----------------AACAT---TTG-TG-GAATA------TTG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363372 29 -   8254450 tg--------------a--a----AT----------------AGCAT---TGG-CA-GAATATTT-aatca
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42279 29 -     48117 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATTT-aatca
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22505 25 -     27822 TG--------------A--A---TAT----------------AGCGT---TGG-TA-GAATA------TCA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8638 29 +     27589 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATT-AAATTA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52545 25 -     62432 TG--------------A--A---TGT----------------GGCAC---TGG-ta-gaata------tca
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359716 29 +    437263 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAGTATTT-aatca
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179433 29 +    366855 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATTT-aatca
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25677 30 -     82753 TG--------------A--A----AT----------------AGCAT---TGG-TAAGAATATTT-aatca
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18669 28 -     63510 TG--------------A--A----AT----------------AGCAT---TAG-CA-GAATATT--AATCA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39336 29 +     47283 TG--------------A--A----AT----------------ATCAT---TGG-CA-GAATAATT-aatca
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593327 25 + 120012414 t---------------T--A---TAA----------------AACAC---GGTATG-GAATA------TTG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687713 25 + 129401213 t---------------t--a---tat----------------aacac---GGTATG-GAATA------TTG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497006 25 + 130317789 t---------------t--a---tat----------------aacac---GGTATG-GAATA------TTG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83447 25 -     86153 TG--------------A--A---CAT----------------AGCAT---TAG-TA-AAATA------TCA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355270 29 +  14710649 tg--------------a--a----AT----------------AGCAT---TGG-CA-GAATATT-Aaatta
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63261 22 +     67721 AG--------------A--G---TAT----------------AGCAT---TGG-TA-AAATA---------
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 1 C 0
s Myotis_brandtii.KE162005.1                               9793626 29 +  10118263 tg--------------a--a----at----------------atCAT---TGG-CA-GAATATTTCa-tca
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387756 29 +   6019432 tg--------------a--a----at----------------atCAT---TGG-CA-GAATATTTCa-tca
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383583 29 +   4330536 tg--------------a--a----at----------------atCAT---TGG-CA-GAATATTTCa-tca
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2392 29 +     18357 TG--------------A--A----AT----------------ATCAT---TGG-CA-GAATATTTCa-tca
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119900 30 +    130748 TG--------------A--A---TGT----------------AGTAT---TGG-TA-GATTATTT-CATCA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946439 25 +   3037898 TG--------------A--A---TAT----------------GGCAT---TGG-Ta-taatg------tta
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29143 25 +     34575 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232394 29 -   7148211 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAGTATTT-aatca
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128403 29 -    149072 TG--------------A--A----AT----------------AACAT---TGG-AA-GAATATTT-aatca
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53896 25 -    132029 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                               9991 25 -     16345 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TAA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15876 25 +     22201 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TAA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414097 25 -  22158432 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26274 25 -     54323 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TAA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198383 29 +   9404916 tg--------------a--a----at----------------agCAT---TGA-TA-GAATATT-AGATCA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636750 25 + 196305487 TG--------------A--A---TAT----------------AGTAT---TGG-CA-GGAGa------tca
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3504 25 -      3937 TG--------------A--A---TAT----------------AGTAT---TGG-CA-GGAGa------tca
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93565009 25 - 199412804 TG--------------A--A---TAT----------------AGTAT---TGG-TA-GGAGa------tca
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557061 25 -   3988456 NN--------------N--N---NNN----------------NNNNN---NNN-TG-GAATa------tca
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055210 22 -  11899542 AG--------------A--G---TAT----------------AGCAT---Tgg-ta-aaata---------
i Octodon_degus.JH651603.1                               I 1 C 0
s Odobenus_rosmarus.KB229312.1                             1451845 29 +   2017862 tg--------------a--a----at----------------agCAT---TGG-CA-GAATATT-Aaatta
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436447 29 -    630418 tg--------------a--a----at----------------atCAT---TGG-TA-GAATATTT-aatca
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14439 29 +    150152 tg--------------a--a----at----------------aGCAT---TGG-TA-GAATATTT-aatca
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92960 27 -    140218 T---------------TCTA---TAT---------------TCACAT---TAG-TG-GAATA------TTA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3841 24 -     41509 T---------------T--A---TAT----------------AACAT---TCA-TG-GAATA------TTG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8102784 29 +  10937097 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAGTATTT-aatca
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13969 27 -     14239 TG--------------A--A---T-------------------GTAA---CAG-TA-GACTATTT-aatca
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103797 25 - 174332312 tg--------------a--a---tat----------------aGAAT---TGG-TG-GAATa------tca
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39428 29 +    559221 tg--------------a--a----at----------------agCAT---TGA-TA-GAATATT-Aaatca
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40318 25 -     51505 TG--------------A--A---TAT----------------AGTAT---TGG-CA-GGAGa------tca
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             353321 25 +   1103335 TG--------------A--A---TAT----------------AGTAT---TGG-CA-GGAGA------TCA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404351 29 -  44047080 tg--------------a--a----at----------------AGCAT---TGG-TA-GAATATTT-aatca
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4870 29 +     17875 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAATATTT-aatca
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1472990 24 - 189151597 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TC-
i Pan_troglodytes.CM009242.2                             C 0 I 30
s Panthera_onca.PanOnc_flattened_line_3271                   24648 29 -    230217 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATTT-AATCA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18461974 29 -  18783137 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATTT-AATCA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972633 29 +   8748460 TG--------------A--G----AT----------------AGCAT---TGG-CA-GAATATTT-AATCA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615879 29 +   2937107 tg--------------a--a----at----------------agCAT---TGG-TA-GAATATTT-aatca
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243321 25 - 183742232 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9783 25 +     21308 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292356 25 -  20919399 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22431 25 -     27687 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15577 25 +     16796 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22388 25 -     23640 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15249 21 +     78924 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATA---------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 11
s Perodicticus_ibeanus.k141_1921260                          26509 25 +     31479 CG--------------A--A---TAT----------------AGTAT---TGG-TA-GGAGA------TCA
i Perodicticus_ibeanus.k141_1921260                      C 0 I 9
s Perodicticus_potto.k141_1854441                            18879 25 -     24908 TG--------------A--A---TAT----------------AGTAT---TGG-TA-GGAGA------TCA
i Perodicticus_potto.k141_1854441                        C 0 I 9
s Perognathus_longimembris.PerPac_flattened_line_89005        1962 39 +      9367 tgcacacatgcatgcat--g---aat----------------aacat---ctg-ta-gaaTA------TAA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247037 24 +  18517816 T---------------T--A---TAT----------------AACAT---TCA-TG-GAATA------TTG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32105  1 -     56120 ----------------------------------------------------------------------A
i Petromus_typicus.PetTyp_scaffold_17301                 I 13 I 33
s Phocoena_phocoena.PhoPho_flattened_line_24159               4310 29 -     63832 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAGTATTT-aatca
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2601 25 +     55023 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2151 25 -     89929 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2740 25 +     40849 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254404 25 +  14605196 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3931 29 +     22231 TG--------------A--A----AT----------------ATCAT---TGG-CA-GAATCTTT-aatca
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65027 25 +    207309 TG--------------A--A---TAA----------------AGCAT---GGG-TA-GAATA------GCG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6119 25 -     25401 TG--------------A--A---TAA----------------AGCAT---GGG-TA-GAATA------GCG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31863 25 +     58159 TG--------------A--A---TAA----------------AGCAT---GGG-TA-GAATA------GCA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32139 25 +     63561 TG--------------A--A---TAA----------------AGCAT---GGG-TA-GAATA------GCG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31899 25 +     51148 TG--------------A--A---TAA----------------AGCAT---GGG-TA-GAATA------GCG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556869 25 -   4542175 TG--------------A--A---TAA----------------AGCAT---GGG-TA-GAATA------GCG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31883 25 +     51125 TG--------------A--A---TAA----------------AGCAT---GGG-TA-GAATA------GCG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1308 29 +     19503 TG--------------A--A----AT----------------AGAAT---TGG-TA-GAGTATTT-aatca
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8294 25 +     39866 TG--------------A--A---TAA----------------AGCAA---TGG-TA-GAATA------TTG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3376 25 -      9282 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TTG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42780 25 -     87950 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TTG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43176 25 -     88961 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TTG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7872 25 -     39403 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TTG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42823 25 +     87928 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TTG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7871 25 -     60166 TG--------------A--A---TAA----------------AGCAA---TGG-TA-GAATA------TTG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14808 25 -     67232 TG--------------A--A---TAA----------------AGCAA---TGG-TA-GAATA------TTG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42724 25 -     90634 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAATA------TTG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44191 25 +     89403 TG--------------A--A---TAA----------------AGCAA---TGG-TA-GAATA------TTG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178099 25 - 189387572 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192916 25 -   9816681 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              27726 25 +     69807 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GACTA------TCG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44912 25 -     80239 TG--------------A--A---TAC----------------AGCAT---TGG-TA-GACTA------TCG
i Presbytis_mitrata.k141_584736                          C 0 I 4
s Procavia_capensis.ProCapCap_scaffold_165387                  343 11 +      7663 -----------------------------------------------------------ATATTT-AGTCT
i Procavia_capensis.ProCapCap_scaffold_165387            I 3 C 0
s Prolemur_simus.MPIZ01000396.1                            1982779 25 +   4620579 TG--------------A--A---TAT----------------GGCAT---TGG-TA-GAATA------TCA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566286 25 -   2598838 TG--------------A--A---TAT----------------AGCAT---TGG-TA-Gaata------tca
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3924 25 -      7103 TG--------------A--A---TAT----------------AGCAT---TGG-TA-Gaata------tca
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4521 25 -     11706 TG--------------A--A---TAT----------------GGCAT---TGG-TA-Gaata------tca
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8259 25 -     30655 TG--------------A--A---TAT----------------AGCAT---TGG-TA-Gaata------tca
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34572 25 +     46564 TG--------------A--A---TAT----------------AGCAT---TGG-TA-Gaata------tca
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94851 25 -     98465 TG--------------A--A---TAT----------------AGCAT---TGG-TA-Gaata------tca
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8490 25 +     35169 TG--------------A--A---TAT----------------AGCAT---TGG-TA-Gaata------tca
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37647 24 +     52041 T---------------T--A---TAT----------------AACAT---TGG-TA-GAATA------TTG
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52327 29 -     66298 TG--------------A--A----AT----------------AACAT---TGG-CA-GAATATTTT-Gtca
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4843 29 -     18639 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATT-AGATTA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841033 29 -  28871421 tg--------------a--a----at----------------tgcAT---TGG-CA-GAATAATT-AATCA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537548 29 -   4952924 tg--------------a--a----at----------------tgCAT---TGG-CA-GAATAATT-AATCA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099291 29 +  38429054 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATTT-AATCA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27100 25 +     91421 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153592 25 -   7812017 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7967 25 +     72585 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53366 29 +     55069 TG--------------A--A----AT----------------ATCAT---TGG-TA-GAATATTT-aatca
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022930 25 -  90668790 T---------------T--A---TAT----------------AACAT---GGGATG-GAATA------TTG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914910 29 +   3329780 tg--------------a--a----at----------------agcaT---TGG-CA-GAATATTT-agtca
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             1673 25 +      7119 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122280 25 + 195417433 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236523 25 -   7961872 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74966 29 -    116970 TG--------------A--A----AT----------------TACAT---TGG-CA-GACTATTT-AATCA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4183 25 +     27962 TG--------------A--A---TAA----------------AGCAT---TGT-TA-GAATA------TCG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4078 25 +      6077 TG--------------A--A---TAA----------------AGCAT---TGT-TA-GAATA------TCG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4168 25 +      5971 TG--------------A--A---TAA----------------AGCAT---TGT-TA-GAATA------TCG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4089 25 +      5932 TG--------------A--A---TAA----------------AGCAT---TGT-TA-GAATA------TCG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2431 25 -      4390 TG--------------A--A---TAA----------------AGCAT---TGT-TA-GAATA------TCG
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391868 25 - 209938924 TG--------------A--A---TAA----------------AGCAT---TGT-TA-GAATA------TCG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4038 25 +      5979 TG--------------A--A---TAA----------------AGCAT---TGT-TA-GAATA------TCG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                607 25 -     22275 TG--------------A--A---TAA----------------AGCAT---TGT-TA-GAATA------TCA
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8039 29 +     16473 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAATATTTCa-tca
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109205 25 + 121099817 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAGTA------TCA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30772 25 -     47369 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAGTA------TCA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31158 25 -     79414 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAGTA------TCA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27849 25 -     34454 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAGTA------TCA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15250 25 -     22428 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAGTA------TCA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30404 25 -     47109 TG--------------A--A---TAA----------------AGCAT---TGG-TA-GAGTA------TCA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238456 25 +   5703754 TG--------------A--A---TAA----------------AGCAT---TGG-TG-GAATA------TCG
i Sapajus_apella.ctg103                                  C 0 I 4
s Sapajus_macrocephalus.k141_796559                           8046 25 +     21866 TG--------------A--A---TAA----------------AGCAT---TGG-TG-GAATA------TCG
i Sapajus_macrocephalus.k141_796559                      C 0 I 4
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116086 29 +    313613 TA--------------A--G----AT----------------AGCAT---TGG-TA-GAATATTT-aattg
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25419 25 +     27374 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAGTA------TCG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28933 25 +     58920 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15429 25 -     45317 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAGTA------TCG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23088 25 -     42441 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAGTA------TCG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25766 25 -     29113 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28840 25 -     48123 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49416 24 +     77746 T---------------T--A---TAA----------------AACAT---TAG-TG-AAATA------TTG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864362 29 -   1910179 TG--------------A--A----AT----------------AGCAA---TGG-TG-GTATATTT-aatca
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671515 25 +  18376816 TA--------------A--A----AA----------------TGAAT---ATG-CA-GACAAT-----TTG
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868553 25 +   3870691 tg--------------a--a---tat----------------agCAT---TGG-TA-GGATa------tca
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6927 29 -     97271 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAATATT-AAATCA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125071 28 +    196729 TG--------------A--A----AT----------------AGCAT---TAG-CA-GAATATT--AATCA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643956 27 +  69701581 tg--------------g--A----AT----------------AGCAT---T-G-TA-GAATATT--AATCA
i Sus_scrofa.CM000828.4                                  C 0 I 7
s Symphalangus_syndactylus.tarseq_199                       391358 25 +   1523678 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------GAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14494 29 +     22964 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATTT-aatca
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2889 30 +      5583 TG--------------A--C---TGT----------------GGTAT---TGG-TA-GATTATCT-CATCA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191798 29 +    199430 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAATATTT-aatca
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105768 29 -    539355 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAATATTT-aatca
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 835 25 +      9917 TG--------------A--A---TAT----------------GGCAG---TGG-TA-Gaaaa------tca
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7633 25 +     20590 TG--------------A--A---TAT----------------GGCAG---TGG-TA-Gaaaa------tca
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353307 25 - 186847797 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24263  1 -     33621 ----------------------------------------------------------------------A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 14 I 34
s Tolypeutes_matacus.TolMat_scaffold_31955                   19986 30 -     31044 TG--------------A--A---TGT----------------AGCAT---TAG-TA-GAATATTT-AATCA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480324 29 -    610378 TG--------------A--A----AT----------------AACAT---TGG-CA-GAATATTT-aatca
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20965 25 +     26378 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33643 25 -     78344 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20290 25 +     25722 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28596 25 -     62838 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           28641 25 +     46913 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9448 25 -     28527 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30532 25 -     64340 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28569 25 -     63452 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10015 25 +     22490 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3440 25 -      6147 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10345 25 -     13050 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255585 25 -   6242583 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1609 25 +     19340 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173652 29 -    200418 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAATATTT-aatca
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480630 30 -  10818551 tg--------------a--a---tAT----------------AGCGT---TGG-TA-GAATATTT-aatcc
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834300 25 -   4065304 TG--------------A--C---TGT----------------AGCAT---TGG-TG-GAATA------TCA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8323 25 -     70247 TG--------------A--C---TGT----------------AGCAT---TGG-TG-GAATa------tca
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17365897 29 -  33153633 TG--------------A--A----AT----------------AGCAT---TGG-TA-GAATATTT-aatca
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3823 29 -     21056 GA--------------A--G----AT----------------AGCAT---TGG-TA-GAATa-tataattg
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182015 29 +   5085361 tg--------------a--a----AT----------------AGCAT---TGG-CA-GAATATT-Aaatca
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25427 25 -     30710 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24334 25 -    147434 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GAATA------TCA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76484 29 +   5488506 ta--------------a--a----at----------------atcat---TGG-TA-GAATATTT-AAGCA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105149 29 -    112863 TG--------------A--A----AT----------------AGCAT---TGA-TA-GAATATT-Aaatca
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174340 25 -    224448 TG--------------A--A---TAT----------------AGCAT---TGG-TA-GGATa------tca
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29053 29 -     86975 TG--------------A--A----AT----------------AGCAT---TGG-CA-GAATATT-Aaatca
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_435019                       286 24 +      1038 tg--------------a--a---cat----------------agcat---tgg-aa-G-GTA------TCA
i Zapus_hudsonius.ZapHud_scaffold_435019                 N 0 N 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1188 29 +      2126 TG--------------A--A----AC----------------AGCAT---TGG-TA-GAGTATTT-aatca
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5671 29 +     36723 T-------AGAT-AT------------------TTA--GGGT-T--TCGA-G-CG-----A-CCT--GT-G
s Acinonyx_jubatus.LLWD01001279.1                           813062 35 +   1699592 CAGA-CACAGAA-CT------------------T----GAGT-T--TTGA-G-GG-----A-CATTAGT-G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25343 20 +     63021 --------------------------------------GTGT-T--TTTA-G-AA-----A-ACCTAGT--
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 5 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415529 29 +  29979442 t-------agaa-tt------------------t----gagt-t--ttga-g-gg-----a-cgttagt-g
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215866 29 +    347723 t-------agaa-tt------------------t----gagt-t--ttga-g-gg-----g-cattagt-g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18279 29 -     61208 G---------AA-TT------------------TGA--GAGT-G--CTGA-A-GG-----A-CATAACT-T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   47987 29 +     53615 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43969 29 +     44087 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16577 29 -     21945 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18260 29 +     32033 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72425 29 -     84148 T-------AGAC-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44664 29 -     78289 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44103 29 +     55831 T-------AGAC-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42553 29 -     64179 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24187 29 -     24835 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41178 29 +     45454 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46827 29 +     70886 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9000 29 +     30854 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33134 29 +     42133 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585513 31 +   2318259 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177312 31 -    412891 c-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-cctgagt-g
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50619 31 -     68529 t-------agaa-tc------------------tca--gagt-t--ttga-g-ag-----a-ccttagt-g
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1381 29 +     17741 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2006 29 -     15923 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672288 29 +   5030052 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2282 29 -     16391 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1841 29 -     17186 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16200 29 -     32367 C-------AGGA-TT------------------T----GAAG-T--CTGA-G-GA-----A-CCTTAGT-A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19748 14 -     45910 ------------------------------------------------ga-g-gg-----a-cctttct-g
i Arctocebus_calabarensis.k141_1364444                   I 9 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5579 31 -     15198 T-------AGAA-TT------------------TCA--GAGT-T--TCGA-G-GG-----A-CTTGAGT-G
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 8
s Ateles_geoffroyi_b.tarseq_1536                               274879 29 +  21539123 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11045 29 +     48076 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6182 29 -     28759 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33736 29 +     44353 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49105 29 -     71267 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23165 29 -     33135 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6416 31 +     11645 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-ccttagt-g
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6424 31 -     19611 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-cctcagt-g
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963663 22 -  23207421 t-------agaa-tt------------------tca--gagt-t--ttgg-g-gg----------------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 8
s Balaenoptera_bonaerensis.DF411050.1                          163 22 -     25979 t-------agaa-tt------------------tca--gagt-t--ttgg-g-gg----------------
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 8
s Beatragus_hunteri.BeaHun_scaffold_7278                     86521 31 +    124022 t-------agaa-tc------------------tca--gaat-t--ttga-g-gg-----c-ccttagt-g
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22054 31 +    288883 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356446 31 +  48749331 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755010 31 +   1948126 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545152 31 -  45695690 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530173 31 -   4408762 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8054 29 +     28062 T-------AGAT-AT------------------TTA--GAGT-T--TGGA-G-GG-----A-CCT--AT-G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43348 29 -     91139 T-------AGAT-AT------------------TTA--GAGT-T--TGGA-G-GG-----A-CCT--AT-G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20874 29 +     95584 T-------AGAT-AT------------------TTA--GAGT-T--TGGA-G-GG-----A-CCT--AT-G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20787 29 +    119600 T-------AGAT-AT------------------TTA--GAGT-T--TGGA-G-GG-----A-CCT--AT-G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10361 29 +     18648 T-------CGAT-AT------------------TTA--GACT-T--TTGA-G-GG-----A-CCT--AT-G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9896 29 -     13885 T-------AGAT-AT------------------TTA--GACT-T--TTGA-G-GG-----A-CCT--GT-G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1966 29 -      8861 T-------CGAT-AT------------------TTA--GACT-T--TTGA-G-GG-----A-CCT--AT-G
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454358 29 + 189096842 T-------CGAT-AT------------------TTA--GACT-T--TTGA-G-GG-----A-CCT--AT-G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1881 29 +      8664 T-------CGAT-AT------------------TTA--GACT-T--TTGA-G-GG-----A-CCT--AT-G
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631180 15 +  17673402 A-------AGAA-TT------------------TCA--GAGT-T---------------------------
i Camelus_bactrianus.KN276810.1                          C 0 I 9
s Camelus_dromedarius.KN272107.1                           4665466 15 +   7040546 A-------AGAA-TT------------------TCA--GAGT-T---------------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 9
s Camelus_ferus.KB017975.1                                 1209126 15 +   1652518 A-------AGAA-TT------------------TCA--GAGT-T---------------------------
i Camelus_ferus.KB017975.1                               C 0 I 9
s CanFam4.chr16                                           42505547 29 +  60362399 c-------atat-tt------------------t----gagt-t--ttga-g-gg-----a-cattagt-g
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9183 29 -     23171 C-------ATAT-TT------------------T----GAGT-T--TTGA-G-GG-----A-CATTAGT-G
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222526 29 +   9314153 C-------ATAT-TT------------------T----GAGT-T--TTGA-G-GG-----A-CATTAGT-G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615661 29 +  59632846 c-------atat-tt------------------t----gagt-t--ttga-g-gg-----a-cattagt-g
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107242 29 -  63665305 C-------ATAT-TT------------------T----GAGT-T--TTGA-G-GG-----A-CATTAGT-G
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409242 31 -  46296322 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591516 31 +  44709034 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1704 22 -      1880 T-------GAAA-TG------------------TTA--GAGT-T--TTGA-G-GG----------------
i Capromys_pilorides.CapPil_scaffold_652123              C 0 I 8
s Carlito_syrichta.NW_007259797.1                           270628 30 +    496798 T-------AGAC-TC------------------TAA--GAGT-T--TTGA-G-GG-----A-A-TTAGT-G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                437 31 +      9923 T-------AGAA-TT------------------TCA--GAGT-T--TCGA-G-GG-----A-CTTGAGT-G
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27849 16 -     39886 ----------------------------------------------ttga-g-gg-----a-tcttaat-t
i Castor_canadensis.CasCan_scaffold_39952                I 14 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79715 31 -    217609 t-------agaa-tt------------------tta--gaat-t--ttta-g-gg-----a-ccttagt-g
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996578 32 +  23392119 a-------gGAA-TT------------------TGA--GACTCT--TTGA-G-AG-----A-CCTTGAT-A
i Cavia_aperea.AVPZ01000300.1                            I 20 C 0
s Cavia_porcellus.DS562891.1                               5000020 31 +  23407841 a-------gGAA-TT------------------TGA--GACT-T--TTGA-G-AG-----A-CCTTGAT-A
i Cavia_porcellus.DS562891.1                             I 20 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63101 31 -     66877 A-------GGAA-TT------------------TGA--GACT-T--TTGA-G-AG-----A-CCTTGAT-A
i Cavia_tschudii.CavTsc_scaffold_23560                   I 20 C 0
s Cebuella_niveiventris.k141_592277                           5279 29 -     12580 T-------CGAT-AT------------------TTA--GACT-T--TTGA-G-GG-----A-CCT--AT-G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43337 29 +     53515 T-------CGAT-AT------------------TTA--GACT-T--TTGA-G-GG-----A-CCT--AT-G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371265 29 -  26074798 T-------AGAT-AT------------------TTA--GAGT-T--TTCA-G-GG-----A-CCT--AT-G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8154 29 -     34880 T-------AGAT-AT------------------TTA--GAGT-T--TTCA-G-GG-----A-CCT--AT-G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67249 29 -     89041 T-------AGAT-AT------------------TTA--GAGT-T--TTCA-G-GG-----A-CCT--AT-G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2590 30 -      5494 T-------AGAC-TC------------------TAA--GAGT-T--TTGA-G-GG-----A-A-TTAGT-G
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492351 31 -  27778364 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19184 31 +     27315 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141164 29 -   4669795 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44906 29 +     47900 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44730 29 -     44860 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44719 29 -    148725 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26906 29 -     40656 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6872 29 +     20796 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            11989 29 -     17524 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27711 29 -     34525 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11493 29 -     25376 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364088 29 -  39242232 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269805 29 +  21565898 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32178 29 -     45857 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27077 29 -     32606 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3236 29 +      8499 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25633 29 +     70610 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22603 29 +     36323 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12926 53 -     19938 TAGATGATGGAA-TTTATTTaatcat-aaaatct----gagt-t--gtga-g-gg-----a-ccttggt-g
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30790 31 -     33796 T-------AGAA-TT------------------TTA--GAAT-T--TTGA-G-AG-----A-ACTCAGT-G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5307 31 -     15404 t-------agaa-tt------------------tta--gaat-t--ttga-g-ag-----a-actcagt-g
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9154 29 -     32913 T-------AGAT-AT------------------TTA--GAGT-C--TGGA-G-GG-----A-CCT--AT-G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19567 29 -     40346 T-------AGAT-AT------------------TTA--GAGT-C--TGGA-G-GG-----A-CCT--AT-G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19822 29 +    216457 T-------AGAT-AT------------------TTG--GAGT-C--TGGA-G-GG-----A-CCT--AT-G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19615 29 +     39636 T-------AGAT-AT------------------TTG--GAGT-C--TGGA-G-GG-----A-CCT--AT-G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238933 31 -   2543920 t-------agaa-tt------------------tta--gagt-t--ttga-g-gg-----a-ccttgct-a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4210 29 +      5346 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42685 29 -    112038 t-------agat-at------------------tta--gagt-t--tgga-g-gg-----a-cct--at-g
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8256 29 +     34062 T-------AGAT-AT------------------TTA--GAGT-T--TGGA-G-GG-----A-CCT--AT-G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343493 29 +  18827391 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10041 29 -     44032 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304818 29 - 135778131 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 14967 48 +     15858 T-------AGAA-TTTATTTGatcat-aaaatccca--gagt-t--gtaa-g-gg-----a-tcctagt-g
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606542 48 -    839153 T-------AGAA-TTTATTTGatcat-aaaatccca--gagt-t--gtaa-g-gg-----a-tcctagt-g
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531                972 31 +      2406 a-------agaa-tt------------------cca--gagt-t--gtga-a-ag-----g-ccttagt-g
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 I 25
s Colobus_angolensis.KN981557.1                             409243 29 -   2368649 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379119 29 - 200372422 T-------AACT-GG------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2668 29 -     84244 T-------AACT-GG------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807422 29 +  53390261 t-------agaa-tt------------------tc----agt-t--ttga-G-GG-----A-CCTTAGT-A
i Condylura_cristata.JH655891.1                          C 0 I 8
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2940 31 -      8242 t-------agaa-tt------------------tca--gagt-t--tgga-g-gg-----a-cctgaat-g
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44477 30 -     83289 G-------AGAA-TT------------------TGA--GGAA-T--TTGA-G-AA-----A-ACCAAGC--
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115041 31 - 224834208 G-------AGAA-TT------------------TGA--GGGT-T--TTGG-G-AA----AA-ACCAAGT--
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9625 25 +     12657 T-------ATAA-TT------------------TCA--GAGT-T--TTTA-G-TG-----A-AT-------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4515 35 +     87169 CAGA-cacaaaa-ct------------------t----gagt-t--ttga-g-gg-----a-cattagt-g
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645169 19 -   1526836 T-------AGAA-TT------------------TTA--GGG--C--CTGA-G-------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 6
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18496 31 +     50838 t-------agaa-tt------------------tta--gagt-t--taga-g-gg-----a-ccttggt-a
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4510 26 +     36344 T-------AGAA-TT------------------TTA--AACA-T--TTGA-G-GG-----G-CCT------
i Cuniculus_paca.CunPac_flattened_line_7025              I 30 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28290 31 +     75252 t-------agaa-tt------------------tga--gact-t--ttga-g-gg-----a-ccttggg-a
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 33 C 0
s Dasypus_novemcinctus.JH564415.1                          2110276 55 -   2246927 TAAATGATAGaa-tttatttaatcat-aaaatctca--gagt-t--gtga-a-gg-----a-ccttagt-g
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292725 31 +  12879189 t-------aaaa-tt------------------tta--gggt-t--ttga-g-gg-----a-ccttggt-g
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632070 31 -  35494412 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-c
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330630 31 -   2620052 T-------AGAA-TT------------------TTG--GAGT-T--TTGA-G-GG-----A-CTCGAGT-G
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664633 31 -   1390856 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139428 31 -    198055 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99019 31 -    115145 t-------agaa-at------------------tta--gagt-t--ttga-g-gg-----a-ccttggt-a
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950661 31 -  37912305 A-------AGAA-CT------------------GGA--GAGT-T--TTGA-C-AG-----G-GCTCCAA-T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5601 31 -     10735 a-------agaa-ct------------------GGA--GAGT-T--TTGA-C-AG-----G-ACTCCAA-T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10551 31 +     14636 T-------AGAA-TT------------------TGA--GACT-T--TTGA-G-AG-----A-CCTTGGT-A
i Dolichotis_patagonum.DolPat_scaffold_80628             I 34 C 0
s Echinops_telfairi.JH980293.1                            62855272 19 - 111700974 t-------agaa-tg------------------tca--gagc-t--gtga---------------------
i Echinops_telfairi.JH980293.1                           C 0 I 8
s Eidolon_helvum.AWHC01266696.1                               6410 28 +     19438 T----------A-TT------------------TCA--GAGT-T--TTGA-G-GG-----G-CTTTAGT-G
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239882 31 -    607251 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108897 31 -  10337057 c-------aaaa-ta------------------tca--gagt-t--gtga-g-ga-----a-catgact-g
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31190 31 +    110024 G-------AGAA-TT------------------TGA--GGGT-T--TTGA-G-AA----AA-GCCAAGT--
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13161 31 +     18970 G-------AGAA-TT------------------TGA--GGGT-T--TTGA-G-AA----AA-GCCAAGT--
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916267 29 +  41312741 T-------AGAA-TT------------------T----GAGT-T--TTGA-G-GG-----A-CATTAGT-G
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579052 31 +  14770903 t-------agaa-tt------------------tca--gagt-t--ctgg-g-gg-----g-ccttagt-g
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041513 31 -   4378816 T-------AGAA-TT------------------TCC--AAGG-T--TTGA-G-GG-----A-CCTTACT-G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375451 31 +  39960074 T-------AGAA-TT------------------TCC--AAGG-T--TTGA-G-GG-----A-CCTTACT-G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             832 31 -      1194 T-------AGAA-TT------------------TCC--AAGG-T--TTGA-G-GG-----A-CCTTACT-G
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666217 31 +   7059049 T-------AGAG-TT------------------TGA--GAGT-T--CTGA-A-GG-----A-CACTACC-G
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263021 29 +  21539334 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71280 22 -    133382 t-------agaa-tt------------------tca--gagt-t--ttgg-c-gg----------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 8
s Eubalaena_japonica.EubJap_flattened_line_247202              824 22 -      1170 t-------agaa-tt------------------tca--gagt-t--ttgg-g-gg----------------
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 I 8
s Eulemur_albifrons.k141_51491                               14938 31 -     24895 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-cctcagt-g
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42648 31 -     70999 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-cctcagt-g
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86618 31 +    112731 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-cctcagt-g
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43181 31 +     68309 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-cctcagt-g
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53505 31 -     65740 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-cctcagt-g
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24137 31 -     75513 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-cctcagt-g
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48332 31 -     97555 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-cctcagt-g
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5056 31 +     30972 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-ccttagt-g
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42776 31 -     52037 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----g-cctcagt-g
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59179 31 -    111500 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-cctcagt-g
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186246971 35 - 206538554 CAGA-CACAGAA-CT------------------T----GAGT-T--TTGA-G-GG-----A-CATTAGT-G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116757 35 - 205367284 CAGA-CACAGAA-CT------------------T----GAGT-T--TTGA-G-GG-----A-CATTAGT-G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27854 35 -     30238 CAGA-CACAGAA-CT------------------T----GAGT-T--TTGA-G-GG-----A-CATTAGT-G
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916576 31 -   3816255 t-------agca-tt------------------tta--gagt-t--ttga-g-gg-----a-ccttggt-g
i Fukomys_damarensis.KN121974.1                          I 42 C 0
s Galago_moholi.ctg3793                                     125181 31 -    137831 c-------agaa-tt------------------tta--gagc-t--gtga-g-gg-----a-tcttcct-g
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8726 31 +     22493 c-------agaa-tt------------------tta--gagc-t--gtga-g-gg-----a-ccttcct-g
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20797 31 -     32986 c-------agaa-tt------------------tta--gagc-t--gtga-g-gg-----a-ccttcct-g
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1325 31 -     28519 C-------ATAA-TT------------------TTA--GAGT-T--TTGA-A-GG-----A-TCTTAGT-G
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91585 31 -     95226 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ctttagt-g
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34646 22 -     36801 t-------agaa-tt------------------ttg--gagg-g--ttga-g-gg----------------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 8
s Gorilla_beringei.k141_3358147                               5971 29 -      8343 T-------AGAT-AT------------------TTA--GGGT-T--TCGA-G-CG-----A-CCT--GT-G
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                254986 29 - 186649187 t-------agat-at------------------tta--gggt-t--tcga-g-cg-----a-cct--gt-g
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2141 31 -     78134 t-------agaa-tt------------------ttg--gagg-t--ttga-g-gg-----a-cctcagc-g
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14863 31 -     40692 t-------agaa-tt------------------tta--gtgt-t--ttga-g-ag-----a-cctcagt-g
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36265 31 +     49394 t-------agaa-tt------------------tta--gtgt-t--ttga-g-ag-----a-cctcagt-g
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61133 31 -     66874 t-------agaa-tt------------------tta--gtgt-t--ttga-g-ag-----a-cctcagt-g
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10007 31 -     42923 t-------agaa-tt------------------tta--gtgt-t--ttga-g-ag-----a-cctcagt-g
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17007 31 -     53142 t-------agaa-tt------------------tta--gtgt-t--ttga-g-ag-----a-cctcagt-g
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30946 35 -    327341 CAGA-CCTAGAA-CT------------------T----GGGT-T--TTGA-G-GA-----A-CATTAGT-G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9260 31 +     48891 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932551 31 -  22651954 t-------agca-tt------------------tta--gagt-t--gtta-g-gg-----a-cctaggt-g
i Heterocephalus_glaber.JH602082.1                       I 48 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                 581 31 +      4291 T-------GGAG-TT------------------TCA--CGGT-T--GCGA-A-AG-----A-CCCAAGC-G
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7783 31 -     36432 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551775 31 -   1711038 t-------agaa-at------------------tca--gaat-t--ctga-g-ag-----a-ccttagt-a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1224 31 -      2730 t-------agaa-at------------------tca--gaat-t--ctga-g-ag-----a-ccttagt-g
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    142995 29 -    630532 T-------AGAT-AT------------------TTA--GGGT-T--TTGA-G-CG-----A-CCT--GT-G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69862 35 +     83186 t-agacacagaa-ct------------------t----gagt-t--ttga-g-gg-----a-cattagt-g
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72016 31 +    143317 T-------AGAA-TT------------------TGA--GACT-T--TTGA-G-AG-----A-TCTTGGT-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 23 C 0
s Hylobates_agilis.k141_1155965                               6029 29 +     12352 T-------AGAT-AT------------------TTA--GGGT-T--TTGA-G-CG-----A-CCT--GT-G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13213 29 +     55766 T-------AGAT-AT------------------TTA--GGGT-T--TTGA-G-CG-----A-CCT--GT-G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052813 29 + 191637585 T-------AGAT-AT------------------TTA--GGGT-T--TTGA-G-CG-----A-CCT--GT-G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801691 29 +  11177569 T-------AGAT-AT------------------TTA--GGGT-T--TTGA-G-CG-----A-CCT--GT-G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4656 31 -    135385 t-------aaca-tt------------------tta--gagt-t--ttga-g-gg-----a-ccttggt-g
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     386999 31 +   7955117 c-------agaa-tt------------------ata--gagg-g--ttga-g-tg-----a-ccttagt-g
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2560 31 +     11955 T-------AGAA-TT------------------TTA--GAGT-T--TTGA-G-AG-----A-CCTTGGT-G
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10171 31 -     16823 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-tcttagt-g
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240022 29 +   9596543 G---------AA-TT------------------TGA--GGAT-G--CTGA-A-GG-----A-CATTAGT-T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72014 31 -     97402 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43430 29 +    110728 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--GT-G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    32317 36 -     49555 c-------agaa-tt------------------tca--gggt-t--ctgg-g-gggggtgg-ccttagt-g
i Lasiurus_borealis.LasBor_scaffold_26245                I 205 C 0
s Lemur_catta.scaffold_24                                 14759656 31 +  30322482 t-------agaa-tt------------------tta--gtgt-t--taga-g-ag-----a-cctcagt-g
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4345 29 -     13097 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4099 29 +      5940 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3929 29 -      5717 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10301 29 -     11567 T-------AGAT-AT------------------TTA--GACT-T--TTGA-T-GG-----A-CCT--AT-G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11682 29 -     12945 T-------AGAT-AT------------------TTA--GACT-T--TTGA-T-GG-----A-CCT--AT-G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9166 31 +     29618 t-------agaa-tt------------------tta--gagt-t--ttga-g-gg-----a-cctcagt-g
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9162 31 +     31569 t-------agaa-tt------------------tta--gagt-t--ttga-g-gg-----a-cctcagt-g
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9172 31 +     24756 t-------agaa-tt------------------tta--gagt-t--ttga-g-gg-----a-cctcagt-g
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9172 31 +     16388 t-------agaa-tt------------------tta--gagt-t--ttga-g-gg-----a-cctcagt-g
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813656 29 -   3914936 t-------agaa-tt------------------t----gagt-t--ttga-g-gg-----a-cattagt-g
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18025 30 +     24238 T-------AGAA-TT-------------------TA--AACT-T--TTGT-G-GG-----T-CCTTAAA-G
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341360 31 +    662738 t-------agaa-tt------------------tca--gagt-t--ttga-a-gg-----a-ccttagt-g
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334049 29 -   1826925 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10747 31 +     19643 c-------agaa-tt------------------tta--gagc-t--gtga-g-gg-----a-ccttcct-g
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5044410 31 -   6120653 c-------agaa-tt------------------tta--gagc-t--gtga-g-gg-----a-ccttcct-g
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39081193 31 +  43346337 t-------ggag-tt------------------tca--gggt-t--gtga-g-gg-----a-ccttagc-g
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614816 29 +  59628241 c-------atat-tt------------------t----gagt-t--ttga-g-gg-----a-cattagt-g
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45443 29 -     61512 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373105 29 -  60120075 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25368 29 +     30207 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           22471 29 -     24934 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25321 29 +     30527 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36497 29 -     50087 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46241 29 +     51645 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415443 29 - 187317192 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399674 29 +  25927173 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48846 29 -     62418 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1382 29 +     14901 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45318 29 +     59329 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271226 29 +    668171 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                 1502 29 +      1732 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 3024 29 +     17132 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223403 28 -    270270 T----------A-TT------------------TCA--GAGT-T--TTGA-G-GG-----G-CGTTAGT-G
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322513 29 +  24302211 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357344 29 -    752769 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673702 31 -    737560 t-------agaa-tt------------------tcc--tagt-t--ttga-g-gg-----a-cctttgt-g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             220998 31 +    317179 t-------agaa-tt------------------tcc--tagt-t--ttga-g-gg-----a-cctttgt-g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501219 31 +  40650429 c-------agaa-tt------------------atg--gaga-a--taga-g-tg-----a-ccttagt-g
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150547 31 +    207569 c-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26425 29 -     74585 T-------AGAA-AT------------------T----GAGT-T--TTGA-G-GG-----A-CATTAGT-G
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50329 30 -    140813 G-------AGAA-GT------------------TGA--GGGT-T--TTGA-G-AA-----A-ACCTAGT--
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429427 31 +  29670104 A-------AGAA-TT------------------TGA--GGAT-T--TTGA-G-AA----AA-ACCTGGT--
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87642 31 +     93471 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10468 29 +     17804 T-------CGAT-AT------------------TTA--GACT-T--TTGA-G-GG-----A-CCT--AT-G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10968 29 -     12984 T-------CGAT-AT------------------TTA--GACT-T--TTGA-G-GG-----A-CCT--AT-G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19284 29 -     26561 T-------CGAT-AT------------------TTA--GACT-T--TTGA-G-GG-----A-CCT--AT-G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984773 31 +  93316391 t-------agaa-tt------------------tta--gagt-t--ttGA-G-AG-----A-ACTCAGT-G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46337 19 +    145209 t-------agaa-tg------------------tca--gatc-t--gtga---------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 8
s Micronycteris_hirsuta.MicHir_scaffold_2233                185236 31 +    200668 t-------agca-tt------------------tca--gagt-t--ttga-g-gg-----a-cttgcat-g
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962629 32 +  27267610 G-------AGAA-TT------------------TGA--GGGT-T--TTGAAG-AA----AA-ACCAAGT--
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363401 31 -   8254450 t-------agaa-tt------------------tca--gggt-t--ctga-g-gg-----a-ccttagt-g
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42308 31 -     48117 t-------agaa-tt------------------tca--gggt-t--ctga-g-gg-----a-ccttagt-g
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22530 29 -     27822 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8667 29 +     27589 T-------AGAA-TT------------------T----GAGT-T--TTGA-G-GG-----A-CATTAGT-G
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52570 31 -     62432 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-actcagt-g
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359745 31 +    437263 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-c
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179462 31 +    366855 t-------agaa-tt------------------tca--tagt-t--ttta-g-gg-----a-ctttagt-g
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25707 31 -     82753 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18697 35 -     63510 CAGA-CCTAGAA-CT------------------T----GGGT-T--TTGA-G-GA-----A-CATTAGT-G
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39365 31 +     47283 t-------agaa-tt------------------tca--gagt-t--ctgg-g-gg-----a-ccttagt-a
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593352 30 + 120012414 G-------AGAT-TT------------------TGA--GGGT-T--TTGA-G-AA-----A-ACTTAGT--
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687738 30 + 129401213 G-------AGAT-TT------------------TGA--GGGT-T--TTGA-G-GA-----A-ACTTAGT--
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497031 30 + 130317789 G-------AGAT-TT------------------TGA--GGGT-T--TTGA-G-GA-----A-ACTTAGT--
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83472 30 -     86153 T-------ACAG-TT------------------TT---GAGG-C--TTGA-G-GG-----A-TCttagt-g
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 229
s Mustela_putorius.JH418006.1                             14355299 29 +  14710649 t-------agaa-tt------------------t----gagt-t--ttga-g-gg-----a-cattagt-g
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63283 31 +     67721 T-------AGAA-TT------------------TTA--GACT-T--TTGA-G-GG-----A-CCCTGGT-A
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793655 31 +  10118263 t-------agaa-tt------------------tca--gagt-t--ctgg-g-gg-----a-ccttagt-g
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387785 32 +   6019432 t-------agaa-tt------------------tcg--gggt-t--ctgg-gggg-----a-ccttagt-g
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383612 31 +   4330536 t-------agaa-tt------------------tca--gagt-t--ctgg-g-gg-----a-ccttagt-g
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2421 31 +     18357 t-------agaa-tt------------------tca--gagt-t--ctgg-g-gg-----a-ccttagt-g
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119930 49 +    130748 T-------ATAA-TTTATTTaatcattaagatctcc--aagc-c--ttga-g-ga-----a-ccttagc-g
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946464 31 +   3037898 g-------agaa-tt------------------tga--gggt-t--ttga-g-ag-----a-cctaagt-t
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29168 29 +     34575 T-------AACT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-C
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232423 31 -   7148211 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128432 31 -    149072 t-------agaa-tt------------------tca--gagt-t--tgga-g-gg-----a-cttgagt-g
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53921 29 -    132029 T-------AGAT-AT------------------TTA--GGGT-T--TTGA-G-CG-----A-CCT--GT-G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10016 29 -     16345 T-------AGAT-AT------------------TTA--GGGT-T--TTGA-G-CG-----A-CCT--GT-G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15901 29 +     22201 T-------AGAT-AT------------------TTA--GGGT-T--TTGA-G-CG-----A-CCT--GT-G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414122 29 -  22158432 T-------AGAT-AT------------------TTA--GGGT-T--TTGA-G-CG-----A-CCT--GT-G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26299 29 -     54323 T-------AGAT-AT------------------TTA--GGGT-T--TTGA-G-CG-----A-CCT--GT-G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198412 29 +   9404916 C-------ATAT-TT------------------T----GAGT-T--TTGA-G-GG-----A-CATTAGT-G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636775 31 + 196305487 c-------agaa-tt------------------tta--gagc-t--gtga-g-gg-----a-ccttcct-g
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3529 31 -      3937 c-------agaa-tt------------------tta--gagc-t--gtga-g-gg-----a-ccttcct-g
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93565034 31 - 199412804 c-------agaa-tt------------------tta--gagc-t--gtga-g-gg-----a-ccttcct-g
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557086 31 -   3988456 t-------agaa-tt------------------tta--tagt-t--ttaa-g-ga-----a-acttagg-g
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055232 31 -  11899542 t-------agaa-tt------------------tta--gaat-t--ttga-g-gg-----a-ccttggt-a
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451874 29 +   2017862 t-------agaa-tt------------------t----gagt-t--ttga-g-gg-----a-cattagt-g
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436476 31 -    630418 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14468 31 +    150152 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ctttagt-g
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    92987 31 -    140218 G-------AGAA-TT------------------TGA--GAGT-T--TTGA-G-AA----AA-GCCAAGT--
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3865 31 -     41509 G-------GGAA-TT------------------TGA--GGGC-T--TTGA-G-AA----AA-ACCAAGT--
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8102813 31 +  10937097 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              13996 31 -     14239 t-------agaa-tt------------------tca--gagt-g--gtaa-g-gg-----a-ccttagt-g
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103822 31 - 174332312 t-------agaa-tt------------------tta--gact-t--ttgt-g-gg-----c-ccttaaa-g
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39457 29 +    559221 c-------atat-tt------------------t----gagt-t--ttga-g-gg-----a-cattagt-g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40343 31 -     51505 c-------agaa-tt------------------tta--gagc-t--gtga-g-gg-----a-ccttcct-g
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             353346 31 +   1103335 C-------AGAA-TT------------------TTA--GAGC-T--GTGA-G-GG-----A-CCTTCCT-G
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404380 31 -  44047080 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4899 31 +     17875 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             12629 34 -     26668 G-------AGATAAT------------------TGA--GAGT-TGATAGA-G-AG-----AGCCT--GTAG
i Pan_troglodytes.NBAG03003091.1                         I 142 I 128
s Panthera_onca.PanOnc_flattened_line_3271                   24677 35 -    230217 CAGA-cacagaa-ct------------------t----gagt-t--ttga-g-gg-----a-cattagt-g
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462003 35 -  18783137 CAGA-CACAGAA-CT------------------T----GAGT-T--TTGA-G-GG-----A-CATTAGT-G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972662 35 +   8748460 CAGA-CACAGAA-CT------------------T----GAGT-T--TTGA-G-GG-----A-CATTAGT-G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615908 31 +   2937107 t-------agga-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243346 29 - 183742232 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9808 29 +     21308 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292381 29 -  20919399 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22456 29 -     27687 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15602 29 +     16796 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22413 29 -     23640 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15281 28 +     78924 --------TGAA-CT------------------T----GAGT-T--TTGA-G-TG-----A-CATTAGT-G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 11 C 0
s Perodicticus_ibeanus.k141_1921260                          26543 14 +     31479 ------------------------------------------------GA-G-GG-----A-TCTTCCT-G
i Perodicticus_ibeanus.k141_1921260                      I 9 C 0
s Perodicticus_potto.k141_1854441                            18913 14 -     24908 ------------------------------------------------GA-G-GG-----A-TCTTCCT-G
i Perodicticus_potto.k141_1854441                        I 9 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2001 31 +      9367 A-------AGAA-TT------------------GGA--GAGT-T--TTGA-G-GG-----A-ATTTCAC-T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247061 31 +  18517816 G-------GGAA-TT------------------TGA--GGGT-T--TTGA-G-AA----AA-ACCAAGT--
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32139 31 -     56120 t-------tgca-tt------------------tta--gagt-t--ttga-g-ag-----a-ccttggt-t
i Petromus_typicus.PetTyp_scaffold_17301                 I 33 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4339 31 -     63832 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2626 29 +     55023 T-------AACT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2176 29 -     89929 T-------AACT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2765 29 +     40849 T-------AACT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254429 29 +  14605196 T-------AACT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3960 31 +     22231 t-------agaa-tt------------------tca--gagt-t--cagg-g-gg-----g-ccttagt-g
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65052 29 +    207309 T-------AGAT-AT------------------TTA--GAGT-T--TGGA-G-GG-----A-CCT--AT-G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6144 29 -     25401 T-------AGAT-AT------------------TTA--GAGT-T--TGGA-G-GG-----A-CCT--AT-G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31888 29 +     58159 T-------AGAT-AT------------------TTA--GAGT-T--TGGA-G-GG-----A-CCT--AT-G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32164 29 +     63561 T-------AGAT-AT------------------TTA--GAGT-T--TGGA-G-GG-----A-CCT--AT-G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31924 29 +     51148 T-------AGAT-AT------------------TTA--GAGT-T--TGGA-G-GG-----A-CCT--AT-G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556894 29 -   4542175 T-------AGAT-AT------------------TTA--GAGT-T--TGGA-G-GG-----A-CCT--AT-G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31908 29 +     51125 T-------AGAT-AT------------------TTA--GAGT-T--TGGA-G-GG-----A-CCT--AT-G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1337 31 +     19503 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8319 29 +     39866 T-------AGGT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3401 29 -      9282 T-------AGGT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42805 29 -     87950 T-------AGGT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43201 29 -     88961 T-------AGGT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7897 29 -     39403 T-------AGGT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42848 29 +     87928 T-------AGGT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7896 29 -     60166 T-------AGGT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14833 29 -     67232 T-------AGGT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42749 29 -     90634 T-------AGGT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44216 29 +     89403 T-------AGGT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178124 29 - 189387572 T-------AGAT-AT------------------TTA--AGGT-T--TCGA-G-TG-----A-CCT--GT-G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192941 29 -   9816681 T-------AGAT-AT------------------TTA--AGGT-T--TCGA-G-TG-----A-CCT--GT-G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              27751 29 +     69807 T-------AACT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44941 21 -     80239 ----------------------------------TA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Presbytis_mitrata.k141_584736                          I 4 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                  354 31 +      7663 T-------GGAG-TT------------------TCA--CAGT-T--GCGA-A-AG-----A-CTCAAGA-G
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982804 31 +   4620579 T-------AGAA-TT------------------TTA--GTGT-T--TTGA-G-AG-----A-CCTCAGT-G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566311 31 -   2598838 t-------agaa-tt------------------tta--gagt-t--ttGA-G-AG-----A-CCTCAGT-G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3949 31 -      7103 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-cctcagt-g
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4546 31 -     11706 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-cctcagt-g
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8284 31 -     30655 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-cctcagt-g
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34597 31 +     46564 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-cctcagt-g
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94876 31 -     98465 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-cctcagt-g
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8515 31 +     35169 t-------agaa-tt------------------tta--gagt-t--ttga-g-ag-----a-cctcagt-g
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37671 30 +     52041 G-------AGAA-GT------------------TGA--GGGT-T--TTGA-G-AA-----A-ACCTAGT--
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52356 31 -     66298 t-------agaa-ta------------------tca--gagt-t--ttga-g-gg-----a-cttcagg-g
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4872 29 -     18639 T-------AGAA-TT------------------T----GAGT-T--TTGA-A-GG-----A-CATTAGT-G
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841062 26 -  28871421 T----------A-TT------------------TCA--GAGT-G--TTGA-G-GG-----G-CTTTAG---
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537577 26 -   4952924 T----------A-TT------------------TCA--GAGT-G--TTGA-G-GG-----G-CTTTAG---
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099320 35 +  38429054 CAGA-CACAGAA-CT------------------T----GAGT-T--TTGA-G-GG-----A-CATTAGT-G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27125 29 +     91421 T-------AACT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153617 29 -   7812017 T-------AACT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              7992 29 +     72585 T-------AACT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53395 31 +     55069 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022955 30 -  90668790 A-------AGAA-GT------------------TGA--GGGT-T--TTGA-G-AA-----A-ACCTAGT--
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914939 31 +   3329780 t-------agaa-at------------------tca--gaat-t--ttga-g-ag-----a-ccttagt-g
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             1698 29 +      7119 T-------AACT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122305 29 + 195417433 T-------AACT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236548 29 -   7961872 T-------AACT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 74995 28 -    116970 T----------A-TT------------------TCA--GGGT-T--TTGA-A-GG-----G-CTTTAGT-G
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4208 29 +     27962 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4103 29 +      6077 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4193 29 +      5971 T-------GGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4114 29 +      5932 T-------GGAT-AT------------------GTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2456 29 -      4390 T-------GGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391893 29 - 209938924 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4063 29 +      5979 T-------GGAT-AT------------------GTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                632 29 -     22275 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8068 31 +     16473 t-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109230 29 + 121099817 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-ACT--AT-G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30797 29 -     47369 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-ACT--AT-G
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31183 29 -     79414 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27874 29 -     34454 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15275 29 -     22428 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-CCT--AT-G
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30429 29 -     47109 T-------AGAT-AT------------------TTA--GAGT-T--TTGA-G-GG-----A-ACT--AT-G
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238485 17 +   5703754 ----------------------------------------GT-T--TTCA-G-GG-----A-CCT--AT-G
i Sapajus_apella.ctg103                                  I 4 C 0
s Sapajus_macrocephalus.k141_796559                           8075 17 +     21866 ----------------------------------------GT-T--TTCA-G-GG-----A-CCT--AT-G
i Sapajus_macrocephalus.k141_796559                      I 4 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116115 31 +    313613 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 8
s Semnopithecus_entellus.k141_158471                         25444 29 +     27374 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28958 29 +     58920 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15454 29 -     45317 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23113 29 -     42441 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25791 29 -     29113 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28865 29 -     48123 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49440 31 +     77746 G-------AGAA-TT------------------TGA--AGGT-T--TTGA-G-AA----AA-AACAAGT--
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864391 31 -   1910179 t-------agaa-tt------------------tca--gagc-t--ttga-g-gg-----a-cctttgt-g
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671540 26 +  18376816 T-------AGAA-TT------------------TCA--GAGT-T--TCGA-A-TG-----A-CTT------
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1868578 31 +   3870691 c-------agaa-tt------------------ata--gagg-g--ttga-g-tg-----a-ccttagt-g
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              6956 29 -     97271 T-------ACAA-TT------------------T----GAGT-T--TTGA-G-GG-----A-CATTAGT-G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125099 35 +    196729 CAGA-CCTAGAA-CT------------------T----GAGT-T--TTGA-G-GA-----A-CATTAGT-G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6643990 15 +  69701581 -----------------------------------------------TGA-G-GG-----A-CCTTAGT-G
i Sus_scrofa.CM000828.4                                  I 7 C 0
s Symphalangus_syndactylus.tarseq_199                       391383 29 +   1523678 T-------AGAT-AT------------------TTA--GGGT-T--TTGA-G-CG-----A-CCT--GT-G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14523 31 +     22964 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-a
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2919 49 +      5583 T-------ATAA-TTTATTTAATCGTTAAGATCTCC--AAGC-C--TTGA-G-GA-----A-CCTTGGT-G
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191827 31 +    199430 t-------aaaa-tt------------------cca--gagt-t--ttga-g-gg-----a-ccttggt-g
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105797 31 -    539355 t-------aaaa-tt------------------cca--gagt-t--ttga-g-gg-----a-ccttggt-g
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 860 31 +      9917 t-------agac-tc------------------taa--gagt-t--ttga-g-gg-----a-acttagt-g
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7658 31 +     20590 t-------agac-tc------------------taa--gagt-t--ttga-g-gg-----a-acttagt-g
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353332 29 - 186847797 T-------AGCT-AT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24298 31 -     33621 t-------agca-tt------------------ttg--gagt-t--ttga-g-ag-----a-ccttggt-g
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 34 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20016 55 -     31044 TAGATGATAGAA-TTTATTTaatcat-aaaatctca--gagt-t--gtga-g-gg-----a-ccttggt-g
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480353 31 -    610378 t-------agaa-tt------------------tca--gggt-t--ttga-g-gg-----a-cttgagt-g
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        20990 29 +     26378 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33668 29 -     78344 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20315 29 +     25722 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28621 29 -     62838 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           28666 29 +     46913 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9473 29 -     28527 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30557 29 -     64340 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28594 29 -     63452 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10040 29 +     22490 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3465 29 -      6147 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10370 29 -     13050 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255610 29 -   6242583 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1634 29 +     19340 T-------AACT-GT------------------TTA--GAGT-T--TTGA-G-TG-----A-CCT--GT-G
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173681 30 -    200418 c-------agaa-tc------------------tca--gagt-t--ttga-g-gg-----a-cct-agt-g
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480660 31 -  10818551 c-------ggag-tt------------------tca--gagt-t--gcaa-g-gg-----a-ccttagt-g
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834325 28 -   4065304 T-------AACA-TT------------------TTA--G----T--TTGA-A-AG-----A-TCCTAGT-G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8348 30 -     70247 t-------aaca-tt------------------ttagag----t--ttga-a-gg-----a-tcctagt-g
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17365926 31 -  33153633 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttagt-g
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3852 31 -     21056 t-------agaa-tt------------------tca--cagt-t--ttga-g-gg-----a-ccttagt-a
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 8
s Ursus_maritimus.KK499267.1                                182044 29 +   5085361 t-------agac-tt------------------t----gagt-t--ttga-g-gg-----a-cgttagt-g
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25452 31 -     30710 T-------AGAA-TT------------------TTA--GTGT-T--TTGA-G-AG-----A-CCTCAGT-A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24359 31 -    147434 T-------AGAA-TT------------------TTA--GTGT-T--TTGA-G-AG-----A-CCTCAGT-A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76513 15 +   5488506 A-------AGAA-TT------------------TCA--GAGT-T---------------------------
i Vicugna_pacos.KN270157.1                               C 0 I 9
s Vulpes_lagopus.VulLag_flattened_line_12041                105178 29 -    112863 c-------atat-tt------------------t----gagt-t--ttga-g-gg-----a-cattagt-g
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174365 31 -    224448 c-------agaa-tt------------------tta--gagg-g--ctga-g-tg-----a-acttagt-g
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29082 29 -     86975 t-------agaa-tt------------------t----gagt-t--ttga-g-gg-----a-cattagt-g
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       290 31 -      1899 G-------AGAA-TC------------------TGA--GCAT-T--CTGA-G-GG-----A-CATAATT-T
i Zapus_hudsonius.ZapHud_scaffold_286923                 N 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1217 31 +      2126 t-------agaa-tt------------------tca--gagt-t--ttga-g-gg-----a-ccttggt-g
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5700 25 +     36723 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
s Acinonyx_jubatus.LLWD01001279.1                           813097 26 +   1699592 ATTC-GTTT-T-GTGCATCCTCGA----CCC-AT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25363 15 +     63021 --------------GCAAATTCTA----CAA-AT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415558 26 +  29979442 attc-attt-t-gtgtaacctctc----tct-gt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215895 26 +    347723 attc-attt-t-gtgcaacctctg----ccc-at
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18308 25 -     61208 G-AC-ATGT-T-GTACAACTTCTG----CTC-AT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48016 25 +     53615 G-TC-ACTT-T-GTGCAACTTCTG----TTT-AT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          43998 25 +     44087 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16606 25 -     21945 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18289 25 +     32033 G-TC-ATTT-T-GTGCGACTTCTG----TTT-AT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72454 25 -     84148 G-CC-ATTT-C-CTGCACCTTCTA----TTT-AT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44693 25 -     78289 G-CC-ATTT-C-CTGCACCTTCTA----TTT-AT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44132 25 +     55831 G-CC-ATTT-C-CTGCACCTTCTA----TTT-AT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42582 25 -     64179 G-CC-ATTT-C-CTGCACCTTCTA----TTT-AT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24216 25 -     24835 G-CC-ATTT-C-CTGCACCTTCTA----TTT-AT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41207 25 +     45454 G-CC-ATTT-C-CTGCACCTTCTA----TTT-AT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46856 25 +     70886 G-CC-ATTT-C-CTGCACCTTCTA----TTT-AT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9029 25 +     30854 G-CC-ATTT-C-CTGCACCTTCTA----TTT-AT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33163 25 +     42133 G-CC-ATTT-C-CTGCACCTTCTA----TTT-AT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585544 26 +   2318259 attc-attt-c-ctacaatctcta----cat-at
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177343 26 -    412891 gttc-attt-g-aggcagcctctg----ccc-ag
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50650 26 -     68529 atga-attt-c-ctacaacctcta----ccc-at
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1410 25 +     17741 G-TC-ATTT-C-GTGCACCTTCTA----TTT-AT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2035 25 -     15923 G-TC-ATTT-C-GTGCACCTTCTA----TTT-AT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672317 25 +   5030052 G-TC-ATTT-C-GTGCACCTTCTA----TTT-AT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2311 25 -     16391 G-TC-ATTT-C-GTGCACCTTCTA----TTT-AT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1870 25 -     17186 G-TC-ATTT-C-GTGCACCTTCTA----TTT-AT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16229 20 -     32367 G-TA-ATTC-T-ATGGAACCTCTA----------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 1
s Arctocebus_calabarensis.k141_1364444                       19762 25 -     45910 g-tc-attt-t-gtgcaacctctg----tcc-at
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5618 17 -     15198 ------------AGGCAGCCTCAG----CCC-AG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 8 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274908 25 +  21539123 G-CC-ATTT-C-CTGCACCTTCTA----TTT-AT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11074 25 +     48076 G-CC-ATTT-C-CTGCACCTTCTA----TTT-AT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6211 25 -     28759 G-CC-ATTT-C-CTGTACCTTCTA----TTT-AT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33765 25 +     44353 G-CC-ATTT-C-CTGCACCTTCTA----TTT-AT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49134 25 -     71267 G-CC-ATTT-C-CTGCACCTTCTA----TTT-AT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23194 25 -     33135 G-CC-ATTT-C-CTGTACCTTCTA----TTT-AT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6447 25 +     11645 g-tc-attt-t-gtgcaatgtctg----tcc-at
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6455 25 -     19611 g-tc-attt-t-gtgcaATGTCTG----TCC-AT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963693 26 -  23207421 gttc-attt-t-gtacaacctcta----ccc-at
i Balaenoptera_acutorostrata.KI537508.1                  I 8 C 0
s Balaenoptera_bonaerensis.DF411050.1                          193 26 -     25979 gttc-attt-t-gtacaacctcta----ccc-at
i Balaenoptera_bonaerensis.DF411050.1                    I 8 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86552 26 +    124022 attc-attt-c-ctacaacctcta----cac-at
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22085 26 +    288883 attc-attt-c-ctacaggctcta----ccc-at
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356477 26 +  48749331 attc-attt-c-ctacaagctcta----ccc-at
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755041 26 +   1948126 attc-attt-c-ctacaagctcta----ccc-at
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545183 26 -  45695690 attc-attt-c-ctacaagctcta----ccc-at
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530204 26 -   4408762 attc-attt-c-ctacaagctcta----ccc-at
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8083 25 +     28062 G-TC-ATTT-T-GTGCAACTTCTA----TTT-AT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43377 25 -     91139 G-TC-ATTT-T-GTGCAACTTCTA----TTT-AT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20903 25 +     95584 G-TC-ATTT-T-GTGCAACTTCTA----TTT-AT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20816 25 +    119600 G-TC-ATTT-T-GTGCAACTTCTA----TTT-AT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10390 25 +     18648 G-TC-ATTT-C-GTGCACCTTCTG----TTT-AT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9925 25 -     13885 G-TC-ATTT-T-GTGCACCTTCTA----TTT-AT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            1995 25 -      8861 G-TC-ATTT-C-GTGCACCTTCTG----TTT-AT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454387 25 + 189096842 G-TC-ATTT-C-GTGCACCTTCTG----TTT-AT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1910 25 +      8664 G-TC-ATTT-C-GTGCACCTTCTG----TTT-AT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631204 26 +  17673402 GTTC-ATTT-T-GTGCAACCTCTA----CCC-AT
i Camelus_bactrianus.KN276810.1                          I 9 C 0
s Camelus_dromedarius.KN272107.1                           4665490 26 +   7040546 GTTC-ATTT-T-GTGCAACCTCTA----CCC-AT
i Camelus_dromedarius.KN272107.1                         I 9 C 0
s Camelus_ferus.KB017975.1                                 1209150 26 +   1652518 GTTC-ATTT-T-GTGCAACCTCTA----CCC-AT
i Camelus_ferus.KB017975.1                               I 9 C 0
s CanFam4.chr16                                           42505576 26 +  60362399 attc-attt-t-gtgcaacctcta----tct-at
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9212 26 -     23171 ATTC-ATTT-T-GTGCAACCTCTA----TCT-AT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222555 26 +   9314153 ATTC-ATTT-T-GTGCAACCTCTA----TCT-AT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615690 26 +  59632846 attc-attt-t-gtgcaacctcta----tct-at
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107271 26 -  63665305 ATTC-ATTT-T-GTGCAACCTCTA----TCT-AT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409273 26 -  46296322 attc-attt-c-ctacaacctcta----cac-at
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591547 26 +  44709034 attc-attt-c-ctacaacctcta----cac-at
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1734 25 -      1880 T-TC-ATTT-T-GTGAAGATTCTG----TCC-AT
i Capromys_pilorides.CapPil_scaffold_652123              I 8 C 0
s Carlito_syrichta.NW_007259797.1                           270658 25 +    496798 G-TT-ATTT-T-GTGCAACCTCTG----TCC-AT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                468 25 +      9923 GTTC-ATTT-T-AGGTGGCC-CCG----CCC-AG
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27865 25 -     39886 g-tc-attt-t-gtggaacttcAG----TCC-AT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79746 26 -    217609 gttc-attt-t-gtgcaaccttta----cag-at
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996610 25 +  23392119 T-TC-ATTT-T-GTGTAACCTCTG----TCC-AT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000051 25 +  23407841 T-TC-ATTT-T-GTGTAACCTCTG----TTC-AT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63132 25 -     66877 T-TC-ATTT-T-GTGTAACCTCTG----TCC-AT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5308 25 -     12580 G-TC-ATTT-C-GTGCACCTTCTG----TTT-AT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43366 25 +     53515 G-TC-ATTT-C-GTGCACCTTCTG----TTT-AT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371294 25 -  26074798 G-TC-ATTT-C-GTGCACCTTCTA----CTT-AT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8183 25 -     34880 G-TC-ATTT-C-GTGCACCTTCTA----CTT-AT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67278 25 -     89041 G-TC-ATTT-C-GTGCACCTTCTA----CTT-AT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2620 25 -      5494 G-TT-ATTT-T-GTGCAACCTCTG----TCC-AT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492382 25 -  27778364 cttc-attt-t-gtgcaacct-tg----ccc-at
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19215 25 +     27315 cttc-attt-t-gtgcaacct-tg----ccc-at
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141193 25 -   4669795 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44935 25 +     47900 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44759 25 -     44860 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44748 25 -    148725 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26935 25 -     40656 G-TC-ATTT-T-GTGCAGCTTCCG----TTT-AT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6901 25 +     20796 G-TC-ATTT-T-GTGCAACTTCCG----TTT-AT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12018 25 -     17524 G-TC-ATTT-T-GTGCAAAGTCCG----TTT-AT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27740 25 -     34525 G-TC-ATTT-T-GTGCAACTTCCG----TTT-AT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11522 25 -     25376 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364117 25 -  39242232 G-TC-ATTT-T-GTGCAACTTCCG----TTT-AT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269834 25 +  21565898 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32207 25 -     45857 G-TC-ATTT-T-GTGCAACTTCCG----TTT-AT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27106 25 -     32606 G-TC-ATTT-T-GTGCAACTTCCG----TTT-AT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3265 25 +      8499 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25662 25 +     70610 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22632 25 +     36323 G-TC-ATTT-T-GTGCAACGTCCG----TTT-AT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            12979 25 -     19938 g-ta-attt-t-gtacaacctctg----ccc-at
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30821 25 -     33796 G-TC-ATTT-T-GTGCAACCTCTG----TTC-AT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5338 25 -     15404 g-tc-attt-t-gtgcaacctcTG----TCC-AT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9183 25 -     32913 G-TC-ATTT-T-GTGCAACTTCTA----TTT-AT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19596 25 -     40346 G-TC-ATTT-T-GTGCAACTTCTA----TTT-AT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19851 25 +    216457 G-TC-ATTT-T-GTGCAACTTCTA----TTT-AT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19644 25 +     39636 G-TC-ATTT-T-GTGCAACTTCTA----TTT-AT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238964 25 -   2543920 t-tc-attt-t-gtgtaacttctg----tcc-at
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4239 25 +      5346 G-TC-ATTT-C-GTGCACCTACTA----TTT-AT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42714 25 -    112038 g-tc-attt-t-gtgcaacttcTA----TTT-AT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8285 25 +     34062 G-TC-ATTT-T-GTGCAACTTCTA----TTT-AT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343522 25 +  18827391 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10070 25 -     44032 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304847 25 - 135778131 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15015 25 +     15858 g-tc-attt-t-cctcaacctctg----tct-gt
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606590 25 -    839153 g-tc-attt-t-cctcaacctctg----tct-gt
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_1846049               591 25 +       711 G-TC-ATTT-T-GTACAATCTCTG----TAC-AT
i Chrysochloris_asiatica.ChrAsi_scaffold_1846049         n 25 n 25
s Colobus_angolensis.KN981557.1                             409272 25 -   2368649 G-TC-ATTT-T-GTGCAACTTCTG----TTG-AT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379148 25 - 200372422 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2697 25 -     84244 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807459 14 +  53390261 --------------GCGACCTTTG----C-C-AT
i Condylura_cristata.JH655891.1                          I 8 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2971 26 -      8242 gttc-att--tggtgcaacctttg----ctc-at
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44507 15 -     83289 --------------ACAAATTCTA----CAC-AT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115072 15 - 224834208 --------------GCAAATTCTA----CAT-CC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9650  7 +     12657 --------------------AT------CTT-AT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4550 24 +     87169 attg-attt-t-gtgcaacctct------cc-at
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645194 23 -   1526836 G-TC-ATTT-T-ATATAA--TTTG----TTA-CT
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 6 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18527 25 +     50838 t-tc-attt-t-gtgaaaactctg----tcc-at
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4536 20 +     36344 -------TT-T-TTGTAACCTCTG----TCC-AT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28321 18 +     75252 t-tc-attt-t-gtgtaacctc------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110331 25 -   2246927 g-ta-attt-t-gtacaacgtctg----ccc-at
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292756 25 +  12879189 g-tc-attt-t-gtgcaacctttg----tcc-at
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632101 26 -  35494412 gtta-attt-t-gtacaacctcta----ccc-at
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330661 26 -   2620052 GTTC-ATTT-T-AGGCGGCCTCTG----CCC-TG
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664664 25 -   1390856 cttc-attt-t-gtgcaacct-tg----ccc-at
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139459 25 -    198055 cttc-attt-t-gtgcaacct-tg----ccc-at
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99050 25 -    115145 t-tc-attt-t-gtgtaacttctg----tcc-gt
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950692 25 -  37912305 G-TC-ATTG-T-GTGCAACTTCTG----TGC-AT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5632 25 -     10735 G-TC-ATTG-T-GTGCAACTTCTG----TGC-AT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10582 25 +     14636 T-TC-ATTT-T-GTGTAACCTCTG----TCC-AT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62855299 26 - 111700974 g-tc-attt-t-acccaacctttg----cccaac
i Echinops_telfairi.JH980293.1                           I 8 C 0
s Eidolon_helvum.AWHC01266696.1                               6438 26 +     19438 ATTC-ATTT-T-GTGCAGTGTCTG----CCC-AT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239913 26 -    607251 attc-attt-c-ctacaacctcta----ccc-at
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108928 25 -  10337057 g-tc-attt-t-gtacaatctctc----CCT-AT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31221 15 +    110024 --------------GCAAATGCTA----CAT-AC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13192 15 +     18970 --------------GCAAATGCTA----CAT-AC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916296 26 +  41312741 ATTC-ATTT-T-GTGCAACATCTG----CCC-AT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579083 26 +  14770903 gtgc-attt-t-atgcaacctctg----ccc-at
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041544 25 -   4378816 CTTC-ACTT-T-CTGCAACCTCTG----C-C-AT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375482 25 +  39960074 CTTC-ACTT-T-CTGCAACCTCTG----C-C-AT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             863 25 -      1194 CTTC-ACTT-T-CTGCAACCTCTG----C-C-AT
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666248 26 +   7059049 GTTC-ATTT-T-GTGTGGCATTGG----CCC-AT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263050 25 +  21539334 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71310 26 -    133382 gttc-attt-t-gtacaacctcta----ccc-at
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 8 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202              854 26 -      1170 gttc-attt-t-gtacaacctcta----ccc-at
i Eubalaena_japonica.EubJap_flattened_line_247202        I 8 C 0
s Eulemur_albifrons.k141_51491                               14969 25 -     24895 g-tc-attt-t-gtgcaacctctg----tcc-tt
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42679 25 -     70999 g-tc-attt-t-gtgcaacctctg----tcc-tt
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86649 25 +    112731 g-tc-attt-t-gtgcaacctcTG----TCC-AT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43212 25 +     68309 g-tc-attt-t-gtgcaacctcTG----TCC-AT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53536 25 -     65740 g-tc-attt-t-gtgcaacctctg----tcc-tt
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24168 25 -     75513 g-tc-attt-t-gtgcaacctcTG----TCC-AT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48363 25 -     97555 g-tc-attt-t-gtgcaacctcTG----TCC-AT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5087 25 +     30972 g-tc-attt-t-gtgcaacctctg----tcc-at
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42807 25 -     52037 g-tc-attt-t-gtgcaacctctg----tcc-tt
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59210 25 -    111500 g-tc-attt-t-gtgcaacctctg----tcc-tt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247006 26 - 206538554 ATTC-GTTT-T-GTGCATCCTCGA----CCC-AT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116792 26 - 205367284 ATTC-GTTT-T-GTGCATCCTCGA----CCC-AT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27889 26 -     30238 ATTC-GTTT-T-GTGCATCCTCGA----CCC-AT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916607 25 -   3816255 t-ta-attt-t-gtgtaacctctg----tcc-at
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     125212 25 -    137831 g-tc-attt-t-gtgcaacctctg----tcc-at
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8757 25 +     22493 g-tc-attt-t-gtgcaacctctg----tcc-at
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20828 25 -     32986 g-tc-attt-t-gtgcaacctctg----tcc-at
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1356 21 -     28519 G-TC-ATGT-T-GTG----CTCTG----TTT-GT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91616 26 -     95226 attc-attt-c-ctacaacctcta----ccc-at
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34676 25 -     36801 g-tc-tttt-t-atgcaacccctg----ttc-at
i Glis_glis.GliGli_scaffold_33859                        I 8 C 0
s Gorilla_beringei.k141_3358147                               6000 25 -      8343 G-AC-ATTT-T-GTGCAACTTCTG----TTA-AT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255015 25 - 186649187 g-tc-attt-t-gtgcaacttctg----ttt-at
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2172 25 -     78134 g-tc-tttt-g-atgcaactcctg----ttc-at
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14894 25 -     40692 g-tc-attt-t-gtgcaacctcTG----TCC-AT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36296 25 +     49394 g-tc-attt-t-gtgcaacctcTG----TCC-AT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61164 25 -     66874 g-tc-attt-t-gtgcaacctcTG----TCC-AT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10038 25 -     42923 g-tc-attt-t-gtgcaacctcTG----TCC-AT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17038 25 -     53142 g-tc-attt-t-gtgcaacctcTG----TCC-AT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                30981 26 -    327341 ATTC-ATTT-T-GTGCAGCCTCTA----CCC-AT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9291 26 +     48891 attc-attt-c-ctacaacctcta----cac-at
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932582 25 -  22651954 t-tc-attt-t-gtgtaacctctg----tca-at
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                 612 25 +      4291 G-TC-ATTT-T-GTAAAATTTCTG----CCG-GT
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7814 26 -     36432 gttc-attt-t-gtaaagcctcta----ccc-at
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551806 26 -   1711038 gttc-att-tt-gtgcaacctctg----ctc-at
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1255 26 -      2730 gttc-att-tt-gtgcaacctcTG----CTC-AT
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143024 25 -    630532 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  69897 26 +     83186 attg-attt-t-gtgcaacctcta----tcc-at
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 248
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72047 25 +    143317 T-TC-ATTT-T-GTGTAACCTCTG----TCC-AT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6058 25 +     12352 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13242 25 +     55766 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052842 25 + 191637585 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801720 25 +  11177569 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4687 25 -    135385 t-tc-attt-t-gtgtaacctctg----tcc-at
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387030 20 +   7955117 g-tc-attt-t-gtgtaacctcTG----------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_2415743                                    2591 25 +     11955 G-TC-ATTT-T-GTGCAATGTCTG----TCC-AT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10202 26 -     16823 gtta-attt-t-gtacaacctcta----ccc-at
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240051 25 +   9596543 G-TC-ATGT-T-GTACAACTTCTG----CCC-AT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72045 26 -     97402 gtta-attt-t-gtacaacctcta----ccc-at
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43459 25 +    110728 G-CC-ATTT-C-CTGCACCTTCTA----TTT-AT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    32353 26 -     49555 gttc-attt-t-aggcaacctctg----ccc-ac
i Lasiurus_borealis.LasBor_scaffold_26245                C 0 I 5
s Lemur_catta.scaffold_24                                 14759687 25 +  30322482 g-tc-attt-t-gtgcaacctcTG----TCC-AT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4374 25 -     13097 G-TG-ATTT-C-GTGCACCTTCTA----TTT-AT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4128 25 +      5940 G-TG-ATTT-C-GTGCACCTTCTA----TTT-AT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3958 25 -      5717 G-TG-ATTT-C-GTGCACCTTCTA----TTT-AT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10330 25 -     11567 G-TC-ATTT-C-GTGCACCTTCTA----TTT-AT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11711 25 -     12945 G-TC-ATTT-C-GTGCACCTTCTA----TTT-AT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9197 25 +     29618 g-tc-attt-t-gtgcaatctttg----tcc-at
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9193 25 +     31569 g-tc-attt-t-gtgcaaccTTTG----TCC-AT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9203 25 +     24756 g-tc-attt-t-gtgcaaccTTTG----TCC-AT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9203 25 +     16388 g-tc-attt-t-gtgcaaccTTTG----TCC-AT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813685 26 -   3914936 attc-attt-t-gtgcaacctctg----ccc-at
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18055 25 +     24238 G-TC-ATTT-T-ATGCAAACTCTG----TCC-AC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341391 26 +    662738 gtta-attt-t-gtacaacctcta----ccc-at
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334078 25 -   1826925 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10778 25 +     19643 g-tc-attt-t-gtgcaacctctg----tcc-at
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5044441 25 -   6120653 g-tc-attt-t-gtgcaacctctg----tcc-at
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39081224 25 +  43346337 g-tc-attt-t-gcaaaatttctg----ccc-at
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614845 26 +  59628241 attc-attt-t-gtgcaacctcta----tcc-at
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45472 25 -     61512 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373134 25 -  60120075 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25397 25 +     30207 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           22500 25 -     24934 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25350 25 +     30527 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36526 25 -     50087 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46270 25 +     51645 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415472 25 - 187317192 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399703 25 +  25927173 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48875 25 -     62418 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1411 25 +     14901 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45347 25 +     59329 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271255 25 +    668171 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                 1531 25 +      1732 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 3053 25 +     17132 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223431  6 -    270270 ATTC-AT---------------------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                        322542 25 +  24302211 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357373 25 -    752769 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673733 26 -    737560 gttc-attt-t-atgcaatctcag----ccc-at
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221029 26 +    317179 gttc-attt-t-acacaacctctg----ccc-at
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501250 20 +  40650429 g-tc-attt-t-gtgtaacctcTG----------
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                       150578 26 +    207569 gttc-att--ttgtgcaacttctg----ctc-at
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26454 26 -     74585 ATTC-ATTT-T-GTGCAACATCTG----CCC-AT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50359 15 -    140813 --------------GCAAAATCTA----CAA-AT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429458 15 +  29670104 --------------GCAAATTCGA----CAT-AC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87673 26 +     93471 gtta-gttt-t-gtacaacctcta----ccc-at
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10497 25 +     17804 G-TC-ATTT-C-GTGCACCTTCTG----TTT-AT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              10997 25 -     12984 G-TC-ATTT-C-GTGCACCTTCTG----TTT-AT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19313 25 -     26561 G-TC-ATTT-C-GTGCACCTTCTG----TTT-AT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984804 25 +  93316391 G-TC-ATTT-T-GTGCAACCTCTG----TCC-AT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46364 26 +    145209 g-ac-attt-t-acccaaccTTTG----CCCAAT
i Microgale_talazaci.MicTal_scaffold_6613                I 8 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185267 26 +    200668 gttc-atgt-t-aggcagcctctg----tcc-ag
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962661 15 +  27267610 --------------GCAAATgcta----cac-ac
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363432 26 -   8254450 gctc-attt-t-atacaacctctg----ccc-at
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42339 26 -     48117 gctc-attt-t-atacaacctctg----ccc-at
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22559 25 -     27822 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8696 26 +     27589 ATTC-ATTT-T-GTGCAACCTCTG----CCC-AT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52601 25 -     62432 g-tc-attt-t-gtgcaacctcTG----TGC-AT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359776 26 +    437263 gtta-attt-t-gtacaacctcta----ccc-at
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179493 26 +    366855 gttc-gttt-t-atgcaacctctg----ctc-at
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25738 26 -     82753 attc-atgt-c-ctacaagctcta----ccc-at
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18732 26 -     63510 ATTC-ATTT-T-GTGCAACCTCTA----CCC-AT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39396 26 +     47283 gtgc-attt-t-atgcaacctctg----ccc-at
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593382 14 + 120012414 ---------------AAAATTCTA----CAA-AT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687768 14 + 129401213 ---------------CAAATTCTA----CAA-AT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497061 14 + 130317789 ---------------CAAATTCTA----CAA-AT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83731 25 -     86153 G-TC-TTTT-T-ATGCAACCCATG----TTC-AT
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 229 C 0
s Mustela_putorius.JH418006.1                             14355328 26 +  14710649 attc-attt-t-gtgcaacatctg----ccc-at
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63314 25 +     67721 T-TC-ATTC-T-GTGAAAACTCTG----TCC-AT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793686 26 +  10118263 gtgc-attt-t-atgcaacctctg----ccc-at
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387817 26 +   6019432 gtgc-attt-t-atgcaacctctg----ccc-at
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383643 26 +   4330536 gtgc-attt-t-atgcaacctctg----ccc-at
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2452 26 +     18357 gtgc-attt-t-atgcaacctctg----ccc-at
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              119979 25 +    130748 g-tc-gttt-t-tctaaacctctg----tca-gt
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946495 25 +   3037898 g-tc-attc-t-gtgtaacttctg----ctc-at
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29197 25 +     34575 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232454 26 -   7148211 gtta-attt-t-gtacaacctcta----cgc-at
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128463 26 -    149072 gctc-attt-t-aggcagcttctg----cct-at
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53950 25 -    132029 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10045 25 -     16345 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15930 25 +     22201 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414151 25 -  22158432 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26328 25 -     54323 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198441 26 +   9404916 ATTC-ATTT-T-GTGCAACCTCTA----TCC-AT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636806 25 + 196305487 g-tc-attt-t-gtgcaacctctg----tcc-at
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3560 25 -      3937 g-tc-attt-t-gtgcaacctctg----tcc-at
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93565065 25 - 199412804 g-tc-attt-t-gtgcaacctctg----tcc-at
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557117 24 -   3988456 g-tc-attt-t-attca-ctttta----tcc-aC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055263 25 -  11899542 t-tc-attt-t-gtgaaaattctg----tcc-at
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451903 26 +   2017862 attc-attt-t-gtgtaacctctg----ccc-at
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436507 26 -    630418 attc-attt-c-ctacaacctcta----ccc-at
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14499 26 +    150152 attc-attt-c-ctacaacctcta----ccc-at
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93018 15 -    140218 --------------GCAAATTCTA----CAC-AC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3896 15 -     41509 --------------GCACATTCTA----CAC-AC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8102844 26 +  10937097 gtta-attt-t-gtacaacctcta----ccc-at
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_171931              14027 25 -     14239 g-tc-attt-t-gcacaatctctg----tca-gt
i Orycteropus_afer.OryAfe_flattened_line_171931          C 0 N 0
s Oryctolagus_cuniculus.CM000791.1                       107103853 25 - 174332312 g-tc-attt-t-atgcaaactctg----tcc-aC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39486 26 +    559221 attc-attt-t-gtgcaacctcta----tcc-at
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40374 25 -     51505 g-tc-attt-t-gtgcaacctctg----tcc-at
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             353377 25 +   1103335 G-TC-ATTT-T-GTGCAACCTCTG----TCC-AT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404411 26 -  44047080 attc-attt-c-ctacaacctcta----cac-at
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4930 26 +     17875 attc-attt-c-ctacaacctcta----cac-at
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473044 25 - 189151597 G-AC-ATTT-T-GTGCAACTTCTG----CTA-AT
i Pan_troglodytes.CM009242.2                             I 30 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24712 26 -    230217 attc-gttt-t-gtgcatcctcga----ccc-at
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462038 26 -  18783137 ATTC-GTTT-T-GTGCATCCTCGA----CCC-AT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972697 26 +   8748460 ATTC-GTTT-T-GTGCATCCTTGA----CCC-AT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615939 26 +   2937107 attc-attt-c-ctacaacctcta----cac-at
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243375 25 - 183742232 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9837 25 +     21308 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292410 25 -  20919399 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22485 25 -     27687 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15631 25 +     16796 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22442 25 -     23640 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15309 26 +     78924 ATTC-ATTT-T-GTGCAACCTCTA----CCC-AT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26557 25 +     31479 G-TC-ATTT-T-GTGCAACTTCTG----TCC-AT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18927 25 -     24908 G-TC-ATTT-T-GTGCAACTTCTG----TCC-AT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2032 25 +      9367 G-TC-ATTG-T-GTGCAGCTGCTG----TTC-AT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247092 15 +  18517816 --------------GCAAATTCTA----CAC-AG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32170 25 -     56120 t-tc-actt-t-gtgtaacctctg----tcc-at
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4370 26 -     63832 gtta-attt-t-gtacaacctcta----ccc-at
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2655 25 +     55023 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2205 25 -     89929 G-TC-ATTT-T-GTACAACTTCTG----TTT-AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2794 25 +     40849 G-TC-ATTT-T-GTACAACTTCTG----TTT-AT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254458 25 +  14605196 G-TC-ATTT-T-GTACAACTTCtg----ttt-at
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             3991 26 +     22231 gttt-gttt-t-atgcaacctcTG----CCC-AT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65081 25 +    207309 G-TC-ATTT-T-GGGCAACTTCTA----TTT-AT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6173 25 -     25401 G-TC-ATTT-T-GGGCAACTTCTA----TTT-AT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31917 25 +     58159 G-TC-ATTT-T-GGGCAACTTCTA----TTT-AT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32193 25 +     63561 G-TC-ATTT-T-GGGCAACTTCTA----TTT-AT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31953 25 +     51148 G-TC-ATTT-T-GGGCAACTTCTA----TTT-AT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556923 25 -   4542175 G-TC-ATTT-T-GGGCAACTTCTA----TTT-AT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31937 25 +     51125 G-TC-ATTT-T-GGGCAACTTCTA----TTT-AT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1368 26 +     19503 gtta-attt-t-atacaacctcta----ccc-at
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8348 25 +     39866 G-TT-ATTT-T-GTGCAACTTCTA----TTT-AT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3430 25 -      9282 G-TT-ATTT-T-GTGCAACTTCTA----TTT-AT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42834 25 -     87950 G-TT-ATTT-T-GTGCAACTTCTA----TTT-AT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43230 25 -     88961 G-TT-ATTT-T-GTGCAACTTCTA----TTT-AT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7926 25 -     39403 G-TT-ATTT-T-GTGCAACTTCTA----TTT-AT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42877 25 +     87928 G-TT-ATTT-T-GTGCAACTTCTA----TTT-AT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7925 25 -     60166 G-TT-ATTT-T-GTGCAACTTCTA----TTT-AT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14862 25 -     67232 G-TT-ATTT-T-GTGCAACTTCTA----TTT-AT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42778 25 -     90634 G-TT-ATTT-T-GTGCAACTTCTA----TTT-AT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44245 25 +     89403 G-TT-ATTT-T-GTGCAACTTCTA----TTT-AT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178153 25 - 189387572 A-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192970 25 -   9816681 A-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              27780 25 +     69807 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44962 25 -     80239 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                  385 25 +      7663 G-TC-ATTT-T-GTAAAATTTCTG----CCT-GT
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982835 25 +   4620579 G-TC-ATTT-T-GTGCAACCTCTG----TCC-AT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566342 25 -   2598838 G-TC-ATTT-T-GTGCAATGTCTG----TCC-AT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           3980 25 -      7103 g-tc-attt-t-gtgcaATGTCTG----TCC-AT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4577 25 -     11706 g-tc-attt-t-gtgcaATGTCTG----TCC-AT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8315 25 -     30655 g-tc-attt-t-gtgcaATGTCTG----TCC-AT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34628 25 +     46564 g-tc-attt-t-gtgcaatgtctg----tcc-AT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94907 25 -     98465 g-tc-attt-t-gtgcaatgtctg----tcc-AT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8546 25 +     35169 g-tc-attt-t-gtgcaATGTCTG----TCC-AT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37701 15 +     52041 --------------GCAAAATCTA----CAA-AT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52387 26 -     66298 gttc-attt-t-atgcagcttctg----ccc-at
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4901 26 -     18639 ATTC-ATTT-T-GTGCAACATCTG----CCC-AT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099355 26 +  38429054 ATTC-GTTT-T-GTGCATCCTCGA----CCC-AC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27154 25 +     91421 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153646 25 -   7812017 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8021 25 +     72585 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53426 26 +     55069 attc-attt-c-ctacaacctcta----ccc-at
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022985 14 -  90668790 ---------------CAAATTCTA----CAA-AT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914970 25 +   3329780 gttc-att--t-gtgcaacctGTG----CTC-GT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             1727 25 +      7119 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122334 25 + 195417433 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236577 25 -   7961872 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75023 26 -    116970 ATTC-ATTT-T-GTGCAATGTCTG----CCC-AT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4237 25 +     27962 G-TC-ATTT-C-GTGCACCTACTA----TTT-AT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4132 25 +      6077 G-TC-ATTT-C-GTGCACCTTCTA----TTT-AT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4222 25 +      5971 G-TC-ATTT-C-GTGCACCTTCTA----CTT-AT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4143 25 +      5932 G-TC-ATTT-C-GTGCACCTTCTA----CTT-AT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2485 25 -      4390 G-TC-ATTT-C-GTGCACCTTCTA----CTT-AT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391922 25 - 209938924 G-TC-ATTT-C-GTGCACCTACTA----TTT-AT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4092 25 +      5979 G-TC-ATTT-C-GTGCACCTTCTA----CTT-AT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                661 25 -     22275 G-TC-ATTT-C-GTGCACCTTCTA----TTT-AT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8099 26 +     16473 attc-attt-c-ctacaacctcta----cac-at
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109259 25 + 121099817 G-TC-ATTT-C-GTGCACATTCTA----TTC-AT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30826 25 -     47369 G-TC-ATTT-C-GTGCACATTCTA----TTC-AT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31212 25 -     79414 G-TC-ATTT-C-GTGCACATTCTA----TTC-AT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27903 25 -     34454 G-TC-ATTT-C-GTGCACATTCTA----TTC-AT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15304 25 -     22428 G-TC-ATTT-C-GTGCACATTCTA----TTC-AT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30458 25 -     47109 G-TC-ATTT-C-GTGCACATTCTA----TTC-AT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238502 25 +   5703754 G-TC-ATTT-C-GTGCACCTTCTA----CTT-AT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8092 25 +     21866 G-TC-ATTT-C-GTGCACCTTCTA----CTT-AT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116154 14 +    313613 --------------gcaacctttg----c-c-at
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 8 C 0
s Semnopithecus_entellus.k141_158471                         25473 25 +     27374 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      28987 25 +     58920 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15483 25 -     45317 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23142 25 -     42441 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25820 25 -     29113 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28894 25 -     48123 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49471 15 +     77746 --------------GCAAATTCTG----CAG-AC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864422 26 -   1910179 gatc-cttt-t-gtctaacttcTG----TCC-AT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671567 19 +  18376816 ------TTT-A-GTGTAACCTT------CTC-AT
i Sorex_araneus.JH798187.1                               I 1 C 0
s Spermophilus_dauricus.KZ294078.1                         1868609 20 +   3870691 g-tc-attt-t-gtgtaacctcTG----------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525              6985 26 -     97271 ATTA-ATTT-T-ATGTAATCTTTG----CCC-AT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125134 26 +    196729 ATTC-ATTT-T-GTGCAACCTCTA----CCC-AT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644005 26 +  69701581 GTTC-ATTT-T-GTGCAGCCTTTA----CTG-AT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391412 25 +   1523678 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14554 26 +     22964 gttt-attt-t-atgcaacctctg----acc-at
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2968 25 +      5583 G-TC-ATTT-T-TCTCAACCTTTG----TCA-GT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191858 26 +    199430 cttc-attt-t-gtgcaacctctg----ccc-at
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105828 26 -    539355 cttc-attt-t-gtgcaacctctg----ccc-at
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 891 25 +      9917 g-tt-attt-t-gtgcaacctcTG----TCC-AT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7689 25 +     20590 g-tt-attt-t-gtgcaacctcTG----TCC-AT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353361 25 - 186847797 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24329 25 -     33621 t-tc-attt-t-gtgtaacctttg----tcc-at
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20071 25 -     31044 g-ta-actt-t-gtacaacctctg----ccc-at
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480384 26 -    610378 gttc-attt-t-aggcagcctctg----ccc-at
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21019 25 +     26378 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33697 25 -     78344 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20344 25 +     25722 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28650 25 -     62838 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           28695 25 +     46913 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9502 25 -     28527 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30586 25 -     64340 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28623 25 -     63452 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10069 25 +     22490 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3494 25 -      6147 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10399 25 -     13050 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255639 25 -   6242583 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1663 25 +     19340 G-TC-ATTT-T-GTGCAACTTCTG----TTT-AT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173711 26 -    200418 ggtc-attt-c-ctacaacctctg----tcc-at
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480691 25 -  10818551 g-tc-attt-t-gcacaatctctg----cct-gt
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834353 25 -   4065304 G-TC-ATTT-T-ATACAACTTTTG----TCT-AT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8378 25 -     70247 g-tc-attt-t-atacaacttttg----tct-at
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17365957 26 -  33153633 gtta-attt-t-atacaacctcta----ccc-at
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3891 14 -     21056 --------------gcaacctTTG----C-C-AT
i Uropsilus_gracilis.UroGra_scaffold_46687               I 8 C 0
s Ursus_maritimus.KK499267.1                                182073 26 +   5085361 attc-attt-t-gtgtaacctctc----ccc-gt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25483 25 -     30710 G-TC-ATTT-T-GTGCAACCTCTG----TCC-AT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24390 25 -    147434 G-TC-ATTT-T-GTGCAACCTCTG----TCC-AT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76537 26 +   5488506 GTTC-ATTT-T-GTGCAACCTCTA----CCC-AT
i Vicugna_pacos.KN270157.1                               I 9 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105207 26 -    112863 attc-attt-t-gtgcaacctcta----tcc-at
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174396 25 -    224448 g-tc-attc-t-gtgcaacttttg----tct-gt
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29111 26 -     86975 attc-attt-t-gtgcaacctctg----ccc-at
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       321 25 -      1899 G-TC-ATGT-T-GTGCAACTTCTG----CCC-AT
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1248 26 +      2126 gtta-attt-t-gtacaacctcta----ccc-at
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Pteropus_vampyrus.KN525825.1                             3537603  0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5841088  0 -  28871421 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5725 4 +     36723 G-A-AA
s Acinonyx_jubatus.LLWD01001279.1                           813123 2 +   1699592 G-A---
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25378 4 +     63021 G-A-AA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415584 2 +  29979442 g-a---
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215921 2 +    347723 g-a---
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18333 4 -     61208 A-A-AG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48041 4 +     53615 G-A-AA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_441277                          44023 4 +     44087 G-A-AA
i Allochrocebus_lhoesti.k141_441277                      C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16631 4 -     21945 G-A-AA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18314 4 +     32033 G-A-AA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72479 4 -     84148 G-A-AT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44718 4 -     78289 G-A-AT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44157 4 +     55831 G-A-AT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42607 4 -     64179 G-A-AT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24241 4 -     24835 G-A-AT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41232 4 +     45454 G-A-AT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46881 4 +     70886 G-A-AT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9054 4 +     30854 G-A-AT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33188 4 +     42133 G-A-AT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585570 2 +   2318259 g-a---
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177369 2 -    412891 g-a---
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50676 2 -     68529 g-a---
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1435 4 +     17741 G-A-AT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2060 4 -     15923 G-A-AT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672342 4 +   5030052 G-A-AT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2336 4 -     16391 G-A-AT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1895 4 -     17186 G-A-AT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16250 4 -     32367 G-A-AA
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 1 I 156
s Arctocebus_calabarensis.k141_1364444                       19787 4 -     45910 g-a-aa
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5635 2 -     15198 G-A---
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274933 4 +  21539123 G-A-AT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11099 4 +     48076 G-A-AT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6236 4 -     28759 G-A-AT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33790 4 +     44353 G-A-AT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49159 4 -     71267 G-A-AT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23219 4 -     33135 G-A-AT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6472 4 +     11645 g-a-aa
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6480 4 -     19611 G-A-AA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963719 2 -  23207421 g-a---
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          219 2 -     25979 g-a---
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86578 2 +    124022 g-a---
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22111 2 +    288883 g-a---
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356503 2 +  48749331 g-a---
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755067 2 +   1948126 g-a---
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545209 2 -  45695690 g-a---
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530230 2 -   4408762 g-a---
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8108 4 +     28062 G-A-AA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43402 4 -     91139 G-A-AA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20928 4 +     95584 G-A-AA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20841 4 +    119600 G-A-AA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10415 4 +     18648 G-A-AT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9950 4 -     13885 G-A-AT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2020 4 -      8861 G-A-AT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454412 4 + 189096842 G-A-AT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1935 4 +      8664 G-A-AT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631230 2 +  17673402 G-A---
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665516 2 +   7040546 G-A---
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209176 2 +   1652518 G-A---
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505602 2 +  60362399 g-a---
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9238 2 -     23171 G-A---
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222581 2 +   9314153 G-A---
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615716 2 +  59632846 g-a---
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107297 2 -  63665305 G-A---
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409299 2 -  46296322 g-a---
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591573 2 +  44709034 g-a---
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1759 4 -      1880 G-A-AA
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270683 4 +    496798 G-A-AA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                493 2 +      9923 G-A---
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27890 4 -     39886 G-A-AA
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79772 2 -    217609 g-a---
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996635 4 +  23392119 G-A-CA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000076 4 +  23407841 G-A-CA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63157 4 -     66877 G-A-CA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5333 4 -     12580 G-A-AT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43391 4 +     53515 G-A-AT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371319 4 -  26074798 G-A-AT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8208 4 -     34880 G-A-AT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67303 4 -     89041 G-A-AT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2645 4 -      5494 G-A-AA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492407 2 -  27778364 G-A---
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19240 2 +     27315 G-A---
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141218 4 -   4669795 G-A-AA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       44960 4 +     47900 G-A-AA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2779015                          44784 4 -     44860 G-A-AA
i Cercocebus_lunulatus.k141_2779015                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          44773 4 -    148725 G-A-AA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        26960 4 -     40656 G-A-AA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           6926 4 +     20796 G-A-AA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12043 4 -     17524 G-A-AA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          27765 4 -     34525 G-A-AA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11547 4 -     25376 G-A-AA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364142 5 -  39242232 GAA-AA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  269859 4 +  21565898 G-A-AA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32232 4 -     45857 G-A-AA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27131 5 -     32606 GAA-AA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3290 4 +      8499 G-A-AA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           25687 4 +     70610 G-A-AA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22657 4 +     36323 G-A-AA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13004 4 -     19938 g-a-aa
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30846 4 -     33796 G-A-AA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5363 4 -     15404 G-A-AA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9208 4 -     32913 G-A-AA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19621 4 -     40346 G-A-AA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19876 4 +    216457 G-A-AA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19669 4 +     39636 G-A-AA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238989 4 -   2543920 g-a-aa
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4264 4 +      5346 G-A-AT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42739 4 -    112038 G-A-AA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8310 4 +     34062 G-A-AA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343547 4 +  18827391 G-A-AA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10095 4 -     44032 G-A-AA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            304872 4 - 135778131 G-A-AA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15040 4 +     15858 g-a-aa
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606615 4 -    839153 g-a-aa
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1028 4 +      2406 G-A-AA
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          I 25 C 0
s Colobus_angolensis.KN981557.1                             409297 4 -   2368649 G-A-AA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379173 4 - 200372422 G-A-AA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               2722 4 -     84244 G-A-AA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807473 2 +  53390261 A-A---
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2997 2 -      8242 G-A---
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44522 4 -     83289 G-A-AG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115087 4 - 224834208 G-A-AC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9657 2 +     12657 G-A---
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4574 2 +     87169 g-a---
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645217 4 -   1526836 G-A-AA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18552 4 +     50838 g-c-aa
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4556 4 +     36344 G-A-AA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110356 4 -   2246927 g-a-aa
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292781 4 +  12879189 g-a-aa
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632127 2 -  35494412 g-a---
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330687 2 -   2620052 G-A---
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664689 2 -   1390856 G-A---
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139484 2 -    198055 g-a---
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99075 4 -    115145 g-a-aa
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950717 4 -  37912305 G-A-AA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5657 4 -     10735 G-A-AA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10607 2 +     14636 G-A---
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62855325 4 - 111700974 g-a-aa
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6464 2 +     19438 G-A---
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239939 2 -    607251 g-a---
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108953 4 -  10337057 G-A-AA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31236 4 +    110024 A-G-AA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13207 4 +     18970 A-G-AA
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916322 2 +  41312741 G-A---
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579109 2 +  14770903 g-a---
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041569 2 -   4378816 G-C---
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375507 2 +  39960074 G-C---
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             888 2 -      1194 G-C---
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666274 2 +   7059049 G-A---
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263075 4 +  21539334 G-A-AA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71336 2 -    133382 g-a---
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202              880 2 -      1170 g-a---
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               14994 4 -     24895 G-A-AA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42704 4 -     70999 G-A-AA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86674 4 +    112731 G-A-AA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43237 4 +     68309 G-A-AA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53561 4 -     65740 G-A-AA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24193 4 -     75513 G-A-AA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48388 4 -     97555 G-A-AA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5112 4 +     30972 g-a-aa
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42832 4 -     52037 G-A-AA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59235 4 -    111500 G-A-AA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247032 2 - 206538554 G-A---
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116818 2 - 205367284 G-A---
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27915 2 -     30238 G-A---
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916632 4 -   3816255 g-a-aa
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     125237 4 -    137831 g-a-at
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8782 4 +     22493 g-a-ac
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20853 4 -     32986 g-a-aa
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91642 2 -     95226 g-a---
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34701 4 -     36801 g-a-aa
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6025 4 -      8343 G-A-AA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255040 4 - 186649187 g-a-aa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2197 4 -     78134 t-g-aa
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14919 4 -     40692 G-A-AA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36321 4 +     49394 G-A-AA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61189 4 -     66874 G-A-AA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10063 4 -     42923 G-A-AA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17063 4 -     53142 G-A-AA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31007 2 -    327341 G-A---
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9317 2 +     48891 g-a---
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932607 4 -  22651954 g-g-aa
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                 637 4 +      4291 G-G-AA
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7840 2 -     36432 G-A---
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551832 2 -   1711038 g-a---
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1281 2 -      2730 G-A---
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143049 4 -    630532 G-A-AA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70171 2 +     83186 g-a---
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 248 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72072 4 +    143317 G-A-CA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6083 4 +     12352 G-A-AA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13267 4 +     55766 G-A-AA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052867 4 + 191637585 G-A-AA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801745 4 +  11177569 G-A-AA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4712 4 -    135385 t-a-aa
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387051 3 +   7955117 G-A-A-
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_2415743                                    2616 4 +     11955 G-A-AA
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10228 2 -     16823 a-a---
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240076 4 +   9596543 A-A-AG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72071 2 -     97402 g-a---
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43484 4 +    110728 G-A-AT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63104 2 -     65777 g-a---
i Lasiurus_borealis.LasBor_scaffold_16567                I 57 C 0
s Lemur_catta.scaffold_24                                 14759712 4 +  30322482 G-A-AA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4399 4 -     13097 A-A-AT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4153 4 +      5940 A-A-AT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3983 4 -      5717 A-A-AT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10355 4 -     11567 G-A-AT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11736 4 -     12945 G-A-AT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9222 4 +     29618 g-a-aa
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9218 4 +     31569 G-A-AA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9228 4 +     24756 G-A-AA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9228 4 +     16388 G-A-AA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813711 2 -   3914936 g-a---
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18080 4 +     24238 A-A-AA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341417 2 +    662738 g-a---
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334103 4 -   1826925 G-A-AA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10803 4 +     19643 g-a-aa
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5044466 4 -   6120653 g-a-aa
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39081249 4 +  43346337 g-a-aa
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614871 2 +  59628241 g-a---
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45497 4 -     61512 G-A-AA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373159 4 -  60120075 G-A-AA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25422 4 +     30207 G-A-AA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1397292                           22525 4 -     24934 G-A-AA
i Macaca_fascicularis.k141_1397292                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25375 4 +     30527 G-A-AA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36551 4 -     50087 G-A-AA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46295 4 +     51645 G-A-AA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415497 4 - 187317192 G-A-AA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              399728 4 +  25927173 G-A-AA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  48900 4 -     62418 G-A-AA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1436 4 +     14901 G-A-AA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45372 4 +     59329 G-A-AA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271280 4 +    668171 G-A-AA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_503078                                 1556 4 +      1732 G-A-AA
i Macaca_thibetana.k99_503078                            C 0 C 0
s Macaca_tonkeana.k141_339739                                 3078 4 +     17132 G-A-AA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223438 2 -    270270 G-A---
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                        322567 4 +  24302211 G-A-AA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357398 4 -    752769 G-A-AA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673759 2 -    737560 g-a---
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221055 2 +    317179 g-a---
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501271 3 +  40650429 G-A-A-
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150604 2 +    207569 g-a---
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26480 2 -     74585 G-A---
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50374 4 -    140813 G-A-AA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429473 4 +  29670104 A-A-AC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87699 2 +     93471 g-a---
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10522 4 +     17804 G-A-AT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11022 4 -     12984 G-A-AT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19338 4 -     26561 G-A-AT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984829 4 +  93316391 T-A-AA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46390 4 +    145209 G-A-AA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185293 2 +    200668 g-a---
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962676 4 +  27267610 a-g-aa
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363458 2 -   8254450 g-a---
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42365 2 -     48117 g-a---
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22584 4 -     27822 G-A-AA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8722 2 +     27589 G-A---
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52626 4 -     62432 T-A-AA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359802 2 +    437263 g-a---
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179519 2 +    366855 g-g---
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25764 2 -     82753 g-a---
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18758 2 -     63510 G-A---
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39422 2 +     47283 g-a---
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593396 4 + 120012414 G-A-AA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687782 4 + 129401213 G-A-AA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497075 4 + 130317789 G-A-AA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83756 4 -     86153 G-A-AA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355354 2 +  14710649 g-a---
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63339 4 +     67721 G-A-AA
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793712 2 +  10118263 g-a---
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387843 2 +   6019432 g-a---
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383669 2 +   4330536 g-a---
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2478 2 +     18357 g-a---
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120004 4 +    130748 g-a-aa
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946520 4 +   3037898 g-a-aa
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29222 4 +     34575 G-A-AA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232480 2 -   7148211 g-a---
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128489 2 -    149072 g-a---
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53975 4 -    132029 G-A-AA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10070 4 -     16345 G-A-AA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15955 4 +     22201 G-A-AA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414176 4 -  22158432 G-A-AA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26353 4 -     54323 G-A-AA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198467 2 +   9404916 G-A---
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636831 4 + 196305487 g-a-aa
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3585 4 -      3937 g-a-aa
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93565090 4 - 199412804 g-a-aa
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557141 4 -   3988456 A-A-AA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055288 4 -  11899542 g-a-aa
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451929 2 +   2017862 g-a---
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436533 2 -    630418 g-a---
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14525 2 +    150152 g-a---
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93033 4 -    140218 A-G-AA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3911 4 -     41509 G-A-GA
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8102870 2 +  10937097 g-a---
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_1597630                12 4 -       378 G-A-AA
i Orycteropus_afer.OryAfe_flattened_line_1597630         N 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103878 4 - 174332312 A-A-AA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39512 2 +    559221 g-a---
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40399 4 -     51505 g-a-aa
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             353402 4 +   1103335 G-A-AA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404437 2 -  44047080 g-a---
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4956 2 +     17875 g-a---
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473069 4 - 189151597 G-A-AA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24738 2 -    230217 g-a---
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462064 2 -  18783137 G-A---
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972723 2 +   8748460 G-A---
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615965 2 +   2937107 g-a---
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243400 4 - 183742232 G-A-AA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                             9862 4 +     21308 G-A-AA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292435 4 -  20919399 G-A-AA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22510 4 -     27687 G-A-AA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15656 4 +     16796 G-A-AA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22467 4 -     23640 G-A-AA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15335 2 +     78924 G-A---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26582 4 +     31479 G-A-AA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18952 4 -     24908 G-A-AA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2057 4 +      9367 T-A-AA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247107 5 +  18517816 GTA-GA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32195 4 -     56120 g-a-aa
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4396 2 -     63832 g-a---
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2680 5 +     55023 G-AAAA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2230 5 -     89929 G-AAAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            2819 5 +     40849 G-AAAA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254483 5 +  14605196 g-aaaa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4017 2 +     22231 G-A---
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65106 4 +    207309 G-A-AA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6198 4 -     25401 G-A-AA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31942 4 +     58159 G-A-AA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32218 4 +     63561 G-A-AA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31978 4 +     51148 G-A-AA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556948 4 -   4542175 G-A-AA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31962 4 +     51125 G-A-AA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1394 2 +     19503 g-a---
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8373 4 +     39866 G-A-AA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3455 4 -      9282 G-A-AA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42859 4 -     87950 G-A-AA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43255 4 -     88961 G-A-AA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7951 4 -     39403 G-A-AA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42902 4 +     87928 G-A-AA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7950 4 -     60166 G-A-AA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14887 4 -     67232 G-A-AA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42803 4 -     90634 G-A-AA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44270 4 +     89403 G-A-AA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178178 4 - 189387572 G-A-AA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192995 4 -   9816681 G-A-AA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              27805 4 +     69807 G-A-AA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              44987 4 -     80239 G-A-AA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                  410 4 +      7663 G-G-AA
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982860 4 +   4620579 G-A-AA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566367 4 -   2598838 G-A-AA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4005 4 -      7103 G-A-AA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4602 4 -     11706 G-A-AA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8340 4 -     30655 G-A-AA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34653 4 +     46564 G-A-AA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94932 4 -     98465 G-A-AA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8571 4 +     35169 G-A-AA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37716 4 +     52041 G-A-AA
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52413 2 -     66298 G-A---
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4927 2 -     18639 G-A---
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099381 2 +  38429054 G-A---
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27179 4 +     91421 G-A-AA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  153671 4 -   7812017 G-A-AA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8046 4 +     72585 G-A-AA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53452 2 +     55069 g-a---
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37022999 4 -  90668790 G-A-AA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914995 2 +   3329780 G-A---
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             1752 4 +      7119 G-A-AA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122359 4 + 195417433 G-A-AA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236602 4 -   7961872 G-A-AA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75049 2 -    116970 G-A---
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4262 4 +     27962 G-A-AT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4157 4 +      6077 G-A-AT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4247 4 +      5971 G-A-AT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4168 4 +      5932 G-A-AT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2510 4 -      4390 G-A-AT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391947 4 - 209938924 G-A-AT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4117 4 +      5979 G-A-AT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                686 4 -     22275 G-A-AT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8125 2 +     16473 g-a---
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109284 4 + 121099817 G-A-AT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30851 4 -     47369 G-A-AT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31237 4 -     79414 G-A-AT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27928 4 -     34454 G-A-AT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15329 4 -     22428 G-A-AT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30483 4 -     47109 G-A-AT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238527 4 +   5703754 G-A-AT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8117 4 +     21866 G-A-AT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116168 2 +    313613 A-A---
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25498 4 +     27374 G-A-AA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29012 4 +     58920 G-A-AA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15508 4 -     45317 G-A-AA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23167 4 -     42441 G-A-AA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     25845 4 -     29113 G-A-AA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          28919 4 -     48123 G-A-AA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49486 4 +     77746 G-A-AA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864448 2 -   1910179 G-A---
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671586 2 +  18376816 G-A---
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868630 3 +   3870691 G-A-A-
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7011 2 -     97271 G-A---
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125160 2 +    196729 G-A---
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644031 2 +  69701581 G-A---
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391437 4 +   1523678 G-A-AA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14580 2 +     22964 g-a---
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2993 4 +      5583 G-A-AA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191884 2 +    199430 g-a---
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105854 2 -    539355 g-a---
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 916 4 +      9917 G-A-AA
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7714 4 +     20590 G-A-AA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353386 4 - 186847797 G-A-AA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24354 4 -     33621 g-a-aa
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20096 4 -     31044 g-a-aa
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480410 2 -    610378 g-a---
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21044 4 +     26378 G-A-AA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     33722 4 -     78344 G-A-AA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20369 4 +     25722 G-A-AA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      28675 4 -     62838 G-A-AA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           28720 4 +     46913 G-A-AA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9527 4 -     28527 G-A-AA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30611 4 -     64340 G-A-AA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28648 4 -     63452 G-A-AA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10094 4 +     22490 G-A-AA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3519 4 -      6147 G-A-AA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10424 4 -     13050 G-A-AA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             255664 4 -   6242583 G-A-AA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        1688 4 +     19340 G-A-AA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173737 2 -    200418 g-a---
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480716 4 -  10818551 g-a-aa
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834378 4 -   4065304 G-T-aa
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8403 4 -     70247 g-t-aa
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17365983 2 -  33153633 g-a---
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3905 2 -     21056 A-A---
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182099 2 +   5085361 g-a---
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25508 4 -     30710 G-A-AA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24415 4 -    147434 G-A-AA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76563 2 +   5488506 G-A---
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105233 2 -    112863 g-a---
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174421 3 -    224448 g-a-a-
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29137 2 -     86975 g-a---
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       346 3 -      1899 G-A-A-
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1274 2 +      2126 g-a---
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dasyprocta_punctata.DasPun_flattened_line_15900            28339 0 +     75252 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Pteropus_vampyrus.KN525825.1                             3537603 0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5841088 0 -  28871421 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Galeopterus_variegatus.GalVar_scaffold_51812                1377 0 -     28519 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       5729  9 +     36723 GAATCTC--TT
s Acinonyx_jubatus.LLWD01001279.1                           813125  7 +   1699592 --ATCTC--TT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25382  6 +     63021 AGAACT-----
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415586  7 +  29979442 --atctc--tt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215923  7 +    347723 --atctc--tt
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18337 11 -     61208 AAATGTCCATG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48045  9 +     53615 GAATCTC--TT
i Allenopithecus_nigroviridis.k141_3755588               C 0 I 321
s Allochrocebus_lhoesti.k141_441277                          44027  9 +     44087 GAATCTC--TT
i Allochrocebus_lhoesti.k141_441277                      C 0 N 0
s Allochrocebus_preussi.k141_1993939                         16635  9 -     21945 GAATCTC--TT
i Allochrocebus_preussi.k141_1993939                     C 0 I 312
s Allochrocebus_solatus.k141_3554717                         18318  9 +     32033 GAATCTC--TT
i Allochrocebus_solatus.k141_3554717                     C 0 I 315
s Ammotragus_lervia.NIVO01071767.1                         1585572  7 +   2318259 --atctc--ct
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177371  7 -    412891 --atctc--tt
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50678  7 -     68529 --atctc--ct
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1439  5 +     17741 ----CTC--TT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2064  5 -     15923 ----CTC--TT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672346  5 +   5030052 ----CTC--TT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2340  5 -     16391 ----CTC--TT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1899  5 -     17186 ----CTC--TT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16410  7 -     32367 GGATC----TA
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 156 C 0
s Arctocebus_calabarensis.k141_1364444                       19791  9 -     45910 gaatctc--tt
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5637  7 -     15198 --ATTTT--TT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274937  5 +  21539123 ----CTC--TT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11103  5 +     48076 ----CTC--TT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6240  5 -     28759 ----CTC--TT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33794  5 +     44353 ----CTC--TT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49163  5 -     71267 ----CTC--TT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23223  5 -     33135 ----CTC--TT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6476  9 +     11645 gaatctc--tC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6484  9 -     19611 GAATCTC--TC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963721  7 -  23207421 --atctc--tt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          221  7 -     25979 --atctc--tt
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86580  7 +    124022 --atctc--ct
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22113  7 +    288883 --atctc--ct
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356505  7 +  48749331 --atctc--ct
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755069  7 +   1948126 --atctc--ct
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545211  7 -  45695690 --atctc--ct
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530232  7 -   4408762 --atctc--ct
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8112  5 +     28062 ----CCC--TT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43406  5 -     91139 ----CCC--TT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20932  5 +     95584 ----CCC--TT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20845  5 +    119600 ----CCC--TT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10419  5 +     18648 ----CTC--TT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9954  5 -     13885 ----CTC--TT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2024  5 -      8861 ----CTC--TT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454416  5 + 189096842 ----CTC--TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1939  5 +      8664 ----CTC--TT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631232  7 +  17673402 --ATCTC--TT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665518  7 +   7040546 --ATCTC--TT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209178  7 +   1652518 --ATCTC--TT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505604  7 +  60362399 --atctc--tt
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9240  7 -     23171 --ATCTC--TT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222583  7 +   9314153 --ATCTC--TT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615718  7 +  59632846 --atctc--tt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107299  7 -  63665305 --ATCTC--TT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409301  7 -  46296322 --atctc--ct
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591575  7 +  44709034 --atctc--ct
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1763  9 -      1880 GAATCTA--TC
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270687  9 +    496798 GAATGTC--TT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                495  7 +      9923 --ATCTC--TT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27894  7 -     39886 ATATC----TT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79774  7 -    217609 --ATTTC--TT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996639  9 +  23392119 GAATTTA--TC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000080  9 +  23407841 GAATTTA--TC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63161  9 -     66877 GAATTTA--TC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5337  5 -     12580 ----CTC--TT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43395  5 +     53515 ----CTC--TT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371323  5 -  26074798 ----CTC--TT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8212  5 -     34880 ----CTC--TT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67307  5 -     89041 ----CTC--TT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2649  9 -      5494 GAATGTC--TT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492409  7 -  27778364 --ATCTC--TT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19242  7 +     27315 --ATCTC--TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141222  9 -   4669795 GAATTTC--tt
i Cercocebus_atys.KQ010504.1                             C 0 I 300
s Cercocebus_chrysogaster.k141_1522556                       44964  9 +     47900 GAATTTC--TT
i Cercocebus_chrysogaster.k141_1522556                   C 0 I 301
s Cercocebus_lunulatus.k141_2779015                          44788  9 -     44860 GAATTTC--TT
i Cercocebus_lunulatus.k141_2779015                      C 0 N 0
s Cercocebus_torquatus.k141_2159127                          44777  9 -    148725 GAATTTC--TT
i Cercocebus_torquatus.k141_2159127                      C 0 I 301
s Cercopithecus_ascanius.k141_3120866                        26964  9 -     40656 GAATCTC--TT
i Cercopithecus_ascanius.k141_3120866                    C 0 I 318
s Cercopithecus_cephus.k141_4183004                           6930  9 +     20796 GAATCTC--TT
i Cercopithecus_cephus.k141_4183004                      C 0 I 314
s Cercopithecus_diana.k141_132293                            12047  9 -     17524 GAATCTC--TT
i Cercopithecus_diana.k141_132293                        C 0 I 315
s Cercopithecus_hamlyni.k141_566925                          27769  9 -     34525 GAATCTC--TT
i Cercopithecus_hamlyni.k141_566925                      C 0 I 320
s Cercopithecus_lowei.k141_2101310                           11551  9 -     25376 GAATCTC--TT
i Cercopithecus_lowei.k141_2101310                       C 0 I 314
s Cercopithecus_albogularis.ctg5                                  364147  9 -  39242232 GAATCTC--TT
i Cercopithecus_albogularis.ctg5                               C 0 I 312
s Cercopithecus_mona.ctg39                                  269863  9 +  21565898 GAATCTC--TT
i Cercopithecus_mona.ctg39                               C 0 I 316
s Cercopithecus_neglectus.k141_858615                        32236  9 -     45857 GAATCTC--TT
i Cercopithecus_neglectus.k141_858615                    C 0 I 311
s Cercopithecus_nictitans.k141_2995370                       27136  9 -     32606 GAATCTC--TT
i Cercopithecus_nictitans.k141_2995370                   C 0 I 312
s Cercopithecus_petaurista.k141_42573                         3294  9 +      8499 GAATCTC--TT
i Cercopithecus_petaurista.k141_42573                    C 0 I 316
s Cercopithecus_pogonias.k141_6079                           25691  9 +     70610 GAATCTC--TT
i Cercopithecus_pogonias.k141_6079                       C 0 I 315
s Cercopithecus_roloway.k141_3012935                         22661  9 +     36323 GAATCTC--TT
i Cercopithecus_roloway.k141_3012935                     C 0 I 313
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13008  9 -     19938 gaacctc--tt
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30850  9 -     33796 GAATCTC--TC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5367  9 -     15404 GAATCTC--TC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9212  5 -     32913 ----CCC--TC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19625  5 -     40346 ----CCC--TC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19880  5 +    216457 ----CCC--TC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19673  5 +     39636 ----CCC--TC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1238993  9 -   2543920 gaatctc--tC
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4268  5 +      5346 ----CTC--TT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42743  5 -    112038 ----CCC--TT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8314  5 +     34062 ----CCC--TT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343551  9 +  18827391 GAATCTC--TT
i Chlorocebus_aethiops.ctg25                             C 0 I 317
s Chlorocebus_pygerythrus.k141_3063162                       10099  9 -     44032 GAATCTC--TT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 I 317
s Chlorocebus_sabaeus.CM001947.1                            304876  9 - 135778131 GAATCtc--tt
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 317
s Choloepus_didactylus.ChoDid_scaffold_70559                 15044  9 +     15858 gaatctc--tt
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606619  9 -    839153 gaatctc--tt
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1032  9 +      2406 CAATTTC--TC
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409301  9 -   2368649 AAATCtc--tt
i Colobus_angolensis.KN981557.1                          C 0 I 297
s Colobus_guereza.LG01                                      379177  9 - 200372422 AAATCTC--TT
i Colobus_guereza.LG01                                   C 0 I 302
s Colobus_polykomos.k141_906115                               2726  9 -     84244 AAATCTC--TT
i Colobus_polykomos.k141_906115                          C 0 I 310
s Condylura_cristata.JH655891.1                           35807475  7 +  53390261 --ATCTC--TG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          2999  7 -      8242 --ATCTC--CT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44526  6 -     83289 GGAACT-----
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115091  6 - 224834208 ATAACT-----
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9659  7 +     12657 --GTATT--TT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4576  7 +     87169 --atctc--tt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645221  8 -   1526836 GAAC-TA--TG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18556  9 +     50838 gaatcta--tc
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4560  9 +     36344 GAATTTA--TC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28339  2 +     75252 ---------tc
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110360  9 -   2246927 gaatctc--tt
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292785  9 +  12879189 gaatttt--tt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632129  7 -  35494412 --atctc--tt
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330689  7 -   2620052 --ATCTC--TG
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664691  7 -   1390856 --ATCTC--TT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139486  7 -    198055 --atctc--tt
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99079  9 -    115145 gaatccc--tC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950721  7 -  37912305 GTATC----TT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5661  7 -     10735 GTATC----TT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62855329  9 - 111700974 taatttc--tC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6466  7 +     19438 --ATCTC--TT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239941  7 -    607251 --atctc--ct
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108957  9 -  10337057 CAGTATa--tc
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31240  6 +    110024 AGAATT-----
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13211  6 +     18970 AGAACT-----
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916324  7 +  41312741 --ATCTC--TT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579111  7 +  14770903 --atctc--tt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041571  7 -   4378816 --ATCTC--TT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375509  7 +  39960074 --ATCTC--TT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             890  7 -      1194 --ATCTC--TT
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666276  7 +   7059049 --ATCTC--TT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263079  9 +  21539334 GACTCTC--TT
i Erythrocebus_patas.Contig38                            C 0 I 317
s Eschrichtius_robustus.EscRob_flattened_line_8968           71338  7 -    133382 --atctc--tt
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202              882  7 -      1170 --atctc--tt
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               14998  9 -     24895 GAATCTC--CT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42708  9 -     70999 GAATCTC--CT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86678  9 +    112731 GAATCTC--CT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43241  9 +     68309 GAATCTC--CT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53565  9 -     65740 GAATCTC--CT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24197  9 -     75513 GAATCTC--CT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48392  9 -     97555 GAATCTC--CT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5116  9 +     30972 gaatctc--tt
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42836  9 -     52037 GAATCTC--CT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59239  9 -    111500 GAATCTC--CT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247034  7 - 206538554 --ATCTC--TT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116820  7 - 205367284 --ATCTC--TT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27917  7 -     30238 --ATCTC--TT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916636  9 -   3816255 gaatcca--tc
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     125241  9 -    137831 gaatctc--tt
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8786  9 +     22493 gaatctc--tt
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20857  9 -     32986 gaatctc--tt
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1377  9 -     28519 GAATCTC--TT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91644  7 -     95226 --atctc--ct
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34705  9 -     36801 gaatctc--tt
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6029  9 -      8343 GAATCTC--TT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255044  9 - 186649187 gaatctc--tt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2201  9 -     78134 gaatctc--tt
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14923  9 -     40692 GAATCTC--TT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36325  9 +     49394 GAATCTC--TT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61193  9 -     66874 GAATCTC--TT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10067  9 -     42923 GAATCTC--TT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17067  9 -     53142 GAATCTC--TT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31009  7 -    327341 --ATCTC--TT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9319  7 +     48891 --atctc--ct
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932611  9 -  22651954 gaattcA--TC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                 641  9 +      4291 GAATTTC--TC
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7842  7 -     36432 --ATGTC--TT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551834  7 -   1711038 --atctc--tt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1283  7 -      2730 --ATCTC--TT
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143053  9 -    630532 GAATCTC--TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70173  7 +     83186 --atctc--tt
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72076  9 +    143317 GAATTTA--TC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6087  9 +     12352 GAATCTC--TT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13271  9 +     55766 GAATCTC--TT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052871  9 + 191637585 GAATCTC--TT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801749  9 +  11177569 GAATCTC--TT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4716  9 -    135385 gaatGTA--TC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387054  9 +   7955117 GGATCTC--TT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2620  9 +     11955 GAATCTC--TC
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10230  7 -     16823 --atctC--TT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240080 11 +   9596543 AAATGTCCATG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72073  7 -     97402 --atctc--tt
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43488  5 +    110728 ----CTC--TT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63106  3 -     65777 --gtc------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 54
s Lemur_catta.scaffold_24                                 14759716  9 +  30322482 GAATCTC--TT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4403  5 -     13097 ----CTC--TT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4157  5 +      5940 ----CTC--TT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3987  5 -      5717 ----CTC--TT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10359  5 -     11567 ----CTC--TT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11740  5 -     12945 ----CTC--TT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9226  9 +     29618 gaatctc--tC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9222  9 +     31569 GAATCTC--TC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9232  9 +     24756 GAATCTC--TC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9232  9 +     16388 GAATCTC--TC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813713  7 -   3914936 --atctc--tt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18084  6 +     24238 GAATAT-----
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341419  7 +    662738 --atctc--tt
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334107  9 -   1826925 GAATCTC--TT
i Lophocebus_aterrimus.ctg367                            C 0 I 300
s Loris_lydekkerianus.k141_2031736                           10807  9 +     19643 gaatctc--tt
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5044470  9 -   6120653 gaatctc--tt
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39081253  9 +  43346337 gaatttc--tC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614873  7 +  59628241 --atctc--tt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45501  9 -     61512 GAATCTC--TT
i Macaca_arctoides.k141_1757516                          C 0 I 301
s Macaca_assamensis.Contig5                                 373163  9 -  60120075 GAATCTC--TT
i Macaca_assamensis.Contig5                              C 0 I 301
s Macaca_cyclopis.k119_263443                                25426  9 +     30207 GAATCTC--TT
i Macaca_cyclopis.k119_263443                            C 0 I 300
s Macaca_fascicularis.k141_1397292                           22529  9 -     24934 GAATCTC--TT
i Macaca_fascicularis.k141_1397292                       C 0 N 0
s Macaca_fuscata.k119_546792                                 25379  9 +     30527 GAATCTC--TT
i Macaca_fuscata.k119_546792                             C 0 I 300
s Macaca_leonina.k141_321385                                 36555  9 -     50087 GAATCTC--TT
i Macaca_leonina.k141_321385                             C 0 I 300
s Macaca_maura.k141_1103459                                  46299  9 +     51645 GAATCTC--TT
i Macaca_maura.k141_1103459                              C 0 I 300
s Macaca_mulatta.NC_041758.1                                415501  9 - 187317192 GAATCtc--tt
i Macaca_mulatta.NC_041758.1                             C 0 I 301
s Macaca_nemestrina.KQ007038.1                              399732  9 +  25927173 GAATCtc--tt
i Macaca_nemestrina.KQ007038.1                           C 0 I 300
s Macaca_nigra.k141_2818840                                  48904  9 -     62418 GAATCTC--TT
i Macaca_nigra.k141_2818840                              C 0 I 300
s Macaca_radiata.k141_2139468                                 1440  9 +     14901 GAATCTC--TT
i Macaca_radiata.k141_2139468                            C 0 I 301
s Macaca_siberu.k141_2185972                                 45376  9 +     59329 GAATCTC--TT
i Macaca_siberu.k141_2185972                             C 0 I 300
s Macaca_silenus.Contig273                                  271284  9 +    668171 GAATCTC--TT
i Macaca_silenus.Contig273                               C 0 I 300
s Macaca_thibetana.k99_503078                                 1560  9 +      1732 GAATCTC--TT
i Macaca_thibetana.k99_503078                            C 0 N 0
s Macaca_tonkeana.k141_339739                                 3082  9 +     17132 GAATCTC--TT
i Macaca_tonkeana.k141_339739                            C 0 I 300
s Macroglossus_sobrinus.MacSob_scaffold_4024                223440  7 -    270270 --ATCTC--TT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322571  9 +  24302211 GAATCTC--TT
i Mandrillus_leucophaeus.scaffold280                     C 0 I 301
s Mandrillus_sphinx.Contig270                               357402  9 -    752769 GAATCTC--TT
i Mandrillus_sphinx.Contig270                            C 0 I 301
s Manis_javanica.JSZB01003497.1                             673761  7 -    737560 --atctc--tt
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221057  7 +    317179 --atctc--tt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501274  9 +  40650429 GGATCTC--TC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150606  7 +    207569 --atctc--tt
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26482  7 -     74585 --ATCTC--TT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50378  6 -    140813 AGAACT-----
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429477  6 +  29670104 AGAACT-----
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87701  7 +     93471 --atctc--tt
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10526  5 +     17804 ----CTC--TT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11026  5 -     12984 ----CTC--TT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19342  5 -     26561 ----CTC--TT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984833  9 +  93316391 GAATCTC--TT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46394  9 +    145209 TACTTTT--TC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185295  7 +    200668 --atctc--tt
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962680  6 +  27267610 agaact-----
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363460  7 -   8254450 --atctc--tt
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42367  7 -     48117 --atctc--tt
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22588  9 -     27822 GAATCTC--TT
i Miopithecus_ogouensis.k141_1534655                     C 0 I 318
s Mirounga_angustirostris.MirAng_flattened_line_54046         8724  7 +     27589 --ATCTC--TT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52630  9 -     62432 GAATCTC--TT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359804  7 +    437263 --atctc--tt
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179521  7 +    366855 --atctc--tt
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25766  7 -     82753 --atctc--ct
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18760  7 -     63510 --ATCTC--TT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39424  7 +     47283 --atccc--tt
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593400  6 + 120012414 AGAACT-----
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687786  6 + 129401213 AGGACT-----
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497079  6 + 130317789 AGGACT-----
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83760  9 -     86153 ATATATC--TT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 2
s Mustela_putorius.JH418006.1                             14355356  7 +  14710649 --atctc--tt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63343  9 +     67721 GAATCTA--TC
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793714  7 +  10118263 --atctc--tt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387845  7 +   6019432 --atctc--tt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383671  7 +   4330536 --atctc--tt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2480  7 +     18357 --atctc--tt
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120008  9 +    130748 gaatctc--tt
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946524  5 +   3037898 -gaatt-----
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29226  9 +     34575 AAATCTC--TT
i Nasalis_larvatus.k141_1350636                          C 0 I 329
s Neophocaena_asiaeorientalis.KZ687982.1                   1232482  7 -   7148211 --atctc--tt
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128491  7 -    149072 --atttc--tt
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53979  9 -    132029 GAATCTC--TT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10074  9 -     16345 GAATCTC--TT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15959  9 +     22201 GAATCTC--TT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414180  9 -  22158432 GAATCTC--TT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26357  9 -     54323 GAATCTC--TT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198469  7 +   9404916 --ATCTC--TT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636835  9 + 196305487 gaatctc--tt
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3589  9 -      3937 gaatctc--tt
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93565094  9 - 199412804 gaatctc--tt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557145  6 -   3988456 GAATAT-----
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055292  9 -  11899542 gaatcTA--TC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451931  7 +   2017862 --atctc--tt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436535  7 -    630418 --atctc--ct
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14527  7 +    150152 --atctc--ct
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93037  6 -    140218 AGAACT-----
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3915  6 -     41509 AGaact-----
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8102872  7 +  10937097 --atctt--tt
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_1597630                16  9 -       378 GAATTTC--TC
i Orycteropus_afer.OryAfe_flattened_line_1597630         C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103882  6 - 174332312 TAATAT-----
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39514  7 +    559221 --atctc--tt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40403  6 -     51505 gaacct-----
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             353406  6 +   1103335 GAACCT-----
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404439  7 -  44047080 --atctc--ct
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4958  7 +     17875 --atctc--ct
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473073  9 - 189151597 GAAtctc--tt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24740  7 -    230217 --atctc--tt
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462066  7 -  18783137 --ATCTC--TT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972725  7 +   8748460 --ATCTC--TT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615967  7 +   2937107 --atctc--ct
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243404  9 - 183742232 GAATCTC--tt
i Papio_anubis.CM001495.2                                C 0 I 300
s Papio_cynocephalus.k141_1507553                             9866  9 +     21308 GAATCTC--TT
i Papio_cynocephalus.k141_1507553                        C 0 I 300
s Papio_hamadryas.Contig39                                  292439  9 -  20919399 GAATCTC--TT
i Papio_hamadryas.Contig39                               C 0 I 300
s Papio_kindae.k141_2214839                                  22514  9 -     27687 GAATCTC--TT
i Papio_kindae.k141_2214839                              C 0 I 300
s Papio_papio.k141_799093                                    15660  9 +     16796 GAATCTC--TT
i Papio_papio.k141_799093                                C 0 I 300
s Papio_ursinus.k141_2278143                                 22471  9 -     23640 GAATCTC--TT
i Papio_ursinus.k141_2278143                             C 0 I 300
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15337  7 +     78924 --ATCTC--TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26586  9 +     31479 GAATCTC--TT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18956  9 -     24908 GAATCTC--TT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2061  7 +      9367 GTATT----TT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247112  6 +  18517816 AGAACT-----
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32199  9 -     56120 gaatccA--TC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4398  7 -     63832 --atctc--tt
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2685  9 +     55023 AAATCTC--TT
i Piliocolobus_badius.k141_2704958                       C 0 I 305
s Piliocolobus_gordonorum.k141_381342                         2235  9 -     89929 AAATCTC--TT
i Piliocolobus_gordonorum.k141_381342                    C 0 I 293
s Piliocolobus_kirkii.k141_1310104                            2824  9 +     40849 AAATCTC--TT
i Piliocolobus_kirkii.k141_1310104                       C 0 I 294
s Piliocolobus_tephrosceles.PDMG02000141.1                  254488  9 +  14605196 aaatctc--tt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 304
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4019  7 +     22231 --ATCTC--TT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65110  5 +    207309 ----CCC--TT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6202  5 -     25401 ----CCC--TT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31946  5 +     58159 ----CCC--TT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32222  5 +     63561 ----CCC--TT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31982  5 +     51148 ----CCC--TT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556952  5 -   4542175 ----CCC--TT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31966  5 +     51125 ----CCC--TT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1396  7 +     19503 --atctc--tt
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8377  5 +     39866 ----CCC--TC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3459  5 -      9282 ----CCC--TC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42863  5 -     87950 ----CCC--TC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43259  5 -     88961 ----CCC--TG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7955  5 -     39403 ----CCC--TC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42906  5 +     87928 ----CCC--TC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7954  5 -     60166 ----CCC--TC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14891  5 -     67232 ----CCC--TC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42807  5 -     90634 ----CCC--TC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44274  5 +     89403 ----CCC--TC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178182  9 - 189387572 GAATctc--ct
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      192999  9 -   9816681 GAATCTC--CT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              27809  9 +     69807 AAATCTC--TT
i Presbytis_comata.k141_1230337                          C 0 I 328
s Presbytis_mitrata.k141_584736                              44991  9 -     80239 AAATCTC--TT
i Presbytis_mitrata.k141_584736                          C 0 I 327
s Procavia_capensis.ProCapCap_scaffold_165387                  414  9 +      7663 GAATTTC--TC
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982864  9 +   4620579 GAATCTC--TT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566371  9 -   2598838 GAATCTC--TC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4009  9 -      7103 GAATCTC--TC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4606  9 -     11706 GAATCTC--TC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8344  9 -     30655 GAATCTC--TC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34657  9 +     46564 GAATCTC--TC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94936  9 -     98465 GAATCTC--TC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8575  9 +     35169 GAATCTC--TC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37720  6 +     52041 AGAACT-----
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52415  7 -     66298 --ACGCT--TT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4929  7 -     18639 --ATCTC--TT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099383  7 +  38429054 --ATCTC--TG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27183  9 +     91421 AAATCTC--TT
i Pygathrix_cinerea.k141_1153803                         C 0 I 328
s Pygathrix_nigripes_b.ctg100                                  153675  9 -   7812017 AAATCTC--TT
i Pygathrix_nigripes_b.ctg100                               C 0 I 320
s Pygathrix_nigripes_a.k141_215492                              8050  9 +     72585 AAATCTC--TT
i Pygathrix_nigripes_a.k141_215492                         C 0 I 318
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53454  7 +     55069 --atctc--ct
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023003  6 -  90668790 AGAACT-----
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2914997  7 +   3329780 --ATCCC--TT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             1756  9 +      7119 AAATCTC--TT
i Rhinopithecus_bieti.k119_778604                        C 0 I 333
s Rhinopithecus_roxellana.NC_044550.1                    104122363  9 + 195417433 AAATCtc--tt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 342
s Rhinopithecus_strykeri.ctg102                             236606  9 -   7961872 AAATCTC--TT
i Rhinopithecus_strykeri.ctg102                          C 0 I 325
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75051  7 -    116970 --ATCTC--TT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4266  5 +     27962 ----CTC--TT
i Saguinus_bicolor.k141_1429097                          C 0 I 1
s Saguinus_geoffroyi.k141_3779887                             4161  5 +      6077 ----CTC--TT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4251  5 +      5971 ----CTC--TT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4172  5 +      5932 ----CTC--TT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2514  5 -      4390 ----CTC--TT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391951  5 - 209938924 ----CTC--TT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4121  5 +      5979 ----CTC--TT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                690  5 -     22275 ----CTC--TT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8127  7 +     16473 --atctc--ct
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109288  5 + 121099817 ----CTC--TT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30855  5 -     47369 ----CTC--TT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31241  5 -     79414 ----CTC--TT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27932  5 -     34454 ----CTC--TT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15333  5 -     22428 ----CTC--TT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30487  5 -     47109 ----CTC--TT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238531  5 +   5703754 ----CTC--TT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8121  5 +     21866 ----CTC--TT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116170  7 +    313613 --ATCTC--TG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25502  9 +     27374 AAATCTC--TT
i Semnopithecus_entellus.k141_158471                     C 0 I 328
s Semnopithecus_hypoleucos.k141_1910531                      29016  9 +     58920 AAATCTC--TT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 I 326
s Semnopithecus_johnii.k141_843753                           15512  9 -     45317 AAATCTC--TT
i Semnopithecus_johnii.k141_843753                       C 0 I 328
s Semnopithecus_priam.k141_714795                            23171  9 -     42441 AAATCTC--TT
i Semnopithecus_priam.k141_714795                        C 0 I 327
s Semnopithecus_schistaceus.k141_1432920                     25849  9 -     29113 AAATCTC--TT
i Semnopithecus_schistaceus.k141_1432920                 C 0 I 327
s Semnopithecus_vetulus.k141_244474                          28923  9 -     48123 AAATCTC--TT
i Semnopithecus_vetulus.k141_244474                      C 0 I 328
s Sigmodon_hispidus.SigHis_scaffold_20193                    49490  6 +     77746 AGGACT-----
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864450  7 -   1910179 --ATTGC--TT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671588  7 +  18376816 --ATAAC--TT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868633  9 +   3870691 GGATCTC--TC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7013  7 -     97271 --ATCTC--TT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125162  7 +    196729 --ATCTC--TT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644033  7 +  69701581 --ATTTC--TT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391441  7 +   1523678 GAA--TC--TT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14582  7 +     22964 --atctc--tt
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                2997  9 +      5583 GAATCTC--TT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191886  7 +    199430 --atctc--tt
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105856  7 -    539355 --atctc--tt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 920  9 +      9917 GAAAGTC--TT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7718  9 +     20590 GAAAGTC--TT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353390  9 - 186847797 GAATCTC--tt
i Theropithecus_gelada.CM009954.1                        C 0 I 300
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24358  9 -     33621 gaatccA--TC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20100  9 -     31044 gaacctc--tt
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480412  7 -    610378 --atcct--tt
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21048  9 +     26378 AAATCTC--TT
i Trachypithecus_auratus.k141_1189070                    C 0 I 327
s Trachypithecus_crepusculus.k141_539312                     33726  9 -     78344 AAATCTC--TT
i Trachypithecus_crepusculus.k141_539312                 C 0 I 325
s Trachypithecus_cristatus.k141_180416                       20373  9 +     25722 AAATCTC--TT
i Trachypithecus_cristatus.k141_180416                   C 0 I 327
s Trachypithecus_francoisi.k141_1453105                      28679  9 -     62838 AAATCTC--TT
i Trachypithecus_francoisi.k141_1453105                  C 0 I 328
s Trachypithecus_geei.k141_1001272                           28724  9 +     46913 AAATCTC--TT
i Trachypithecus_geei.k141_1001272                       C 0 I 327
s Trachypithecus_germaini.k141_57262                          9531  9 -     28527 AAATCTC--TT
i Trachypithecus_germaini.k141_57262                     C 0 I 329
s Trachypithecus_hatinhensis.k141_31479                      30615  9 -     64340 AAATCTC--TT
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 327
s Trachypithecus_laotum.k141_928651                          28652  9 -     63452 AAATCTC--TT
i Trachypithecus_laotum.k141_928651                      C 0 I 328
s Trachypithecus_leucocephalus.k141_96450                    10098  9 +     22490 AAATCTC--TT
i Trachypithecus_leucocephalus.k141_96450                C 0 I 329
s Trachypithecus_melamera.k141_591572                         3523  9 -      6147 AAATCTC--TT
i Trachypithecus_melamera.k141_591572                    C 0 I 327
s Trachypithecus_obscurus.k141_848057                        10428  9 -     13050 AAGTCTC--TT
i Trachypithecus_obscurus.k141_848057                    C 0 I 335
s Trachypithecus_phayrei.ctg124                             255668  9 -   6242583 AAATCTC--TT
i Trachypithecus_phayrei.ctg124                          C 0 I 325
s Trachypithecus_pileatus.k141_2622778                        1692  9 +     19340 AAATCTC--TT
i Trachypithecus_pileatus.k141_2622778                   C 0 I 329
s Tragulus_javanicus.TraJav_scaffold_3462                   173739  7 -    200418 --atctc--tt
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480720  9 -  10818551 gaatttc--tC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834382  9 -   4065304 gaatctt--tg
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8407  9 -     70247 gaatctt--tG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17365985  7 -  33153633 --atctc--tt
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3907  7 -     21056 --ATCTC--TG
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182101  7 +   5085361 --atctc--tt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25512  9 -     30710 GACTCTC--TT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24419  9 -    147434 GACTCTC--TT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76565  7 +   5488506 --ATCTC--TT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105235  7 -    112863 --atctc--tt
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174424  9 -    224448 ggatctc--tt
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29139  7 -     86975 --atctc--tt
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1276  7 +      2126 --atctc--tt
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Zapus_hudsonius.ZapHud_scaffold_286923                       349  0 -      1899 C
e Pteropus_vampyrus.KN525825.1                             3537603  0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5841088  0 -  28871421 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Alouatta_seniculus.k141_928287                             33192  0 +     42133 C
e Alouatta_puruensis.k141_251022                              9058  0 +     30854 C
e Alouatta_palliata.k141_638677                              46885  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             41236  0 +     45454 C
e Alouatta_macconnelli.k141_361275                           24245  0 -     24835 C
e Alouatta_juara.k141_1687208                                42611  0 -     64179 C
e Alouatta_discolor.k141_2561099                             44161  0 +     55831 C
e Alouatta_caraya.k141_1109140                               44722  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             72483  0 -     84148 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       5738  7 +     36723 GA-A-A----------CAC
s Acinonyx_jubatus.LLWD01001279.1                           813132  7 +   1699592 AA-A-A----------CAC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415593  7 +  29979442 ga-a-a----------cac
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215930  5 +    347723 ga-a-a------------c
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18348  7 -     61208 GA-A-G----------AAC
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48375  7 +     53615 GA-A-A----------CAC
i Allenopithecus_nigroviridis.k141_3755588               I 321 C 0
s Allochrocebus_lhoesti.k141_3412094                           406  7 +     13857 GA-A-A----------CAC
i Allochrocebus_lhoesti.k141_3412094                     N 0 C 0
s Allochrocebus_preussi.k141_1993939                         16956  7 -     21945 GA-A-A----------CAC
i Allochrocebus_preussi.k141_1993939                     I 312 C 0
s Allochrocebus_solatus.k141_3554717                         18642  7 +     32033 GA-A-A----------CAC
i Allochrocebus_solatus.k141_3554717                     I 315 C 0
s Alouatta_belzebul.k141_1011583                             72483  1 -     84148 ------------------C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44722  1 -     78289 ------------------C
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44161  1 +     55831 ------------------C
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42611  1 -     64179 ------------------C
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24245  1 -     24835 ------------------C
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41236  1 +     45454 ------------------C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46885  1 +     70886 ------------------C
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9058  1 +     30854 ------------------C
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33192  1 +     42133 ------------------C
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585579  7 +   2318259 ga-a-a----------cac
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177378  7 -    412891 GA-A-A----------CAC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50685  7 -     68529 ga-a-a----------cac
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1444  7 +     17741 GA-G-A----------CAC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2069  7 -     15923 GA-G-A----------CAC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672351  7 +   5030052 GA-G-A----------CAC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2345  7 -     16391 GA-G-A----------CAC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1904  7 -     17186 GA-G-A----------CAC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16417  7 -     32367 GT-A-A----------AAC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19800  7 -     45910 AA-A-A----------CAG
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5644  7 -     15198 GA-A-A----------CAC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274942  6 +  21539123 GA-G-A----------CA-
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11108  6 +     48076 GA-G-A----------TA-
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6245  6 -     28759 GA-G-A----------CA-
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33799  6 +     44353 GA-G-A----------CA-
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49168  6 -     71267 GA-G-A----------TA-
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23228  6 -     33135 GA-G-A----------CA-
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6485  7 +     11645 GA-A-A----------CAC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6493  7 -     19611 GA-A-A----------CAC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963728  7 -  23207421 GA-A-A----------CAC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          228  7 -     25979 GA-A-A----------CAC
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86587  7 +    124022 ga-a-a----------cac
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22120  7 +    288883 ga-a-a----------cac
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356512  7 +  48749331 ga-a-a----------cac
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755076  7 +   1948126 ga-a-a----------cac
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545218  7 -  45695690 ga-a-a----------cac
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530239  7 -   4408762 ga-a-a----------cac
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8117  7 +     28062 GG-A-A----------CAC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43411  7 -     91139 GG-A-A----------CAC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  20937  7 +     95584 GG-A-A----------CAC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20850  7 +    119600 GG-A-A----------CAC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10424  7 +     18648 GA-G-A----------CAC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                              9959  7 -     13885 GA-G-A----------CAC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2029  7 -      8861 GA-G-A----------CAC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454421  7 + 189096842 GA-G-A----------CAC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               1944  7 +      8664 GA-G-A----------CAC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631239  7 +  17673402 AA-A-A----------CAC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665525  7 +   7040546 AA-A-A----------CAC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209185  7 +   1652518 AA-A-A----------CAC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505611  7 +  60362399 ga-a-a----------cac
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9247  7 -     23171 GA-A-A----------CAC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222590  7 +   9314153 GA-A-A----------CAC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615725  7 +  59632846 ga-a-a----------cac
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107306  7 -  63665305 GA-A-A----------CAC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409308  7 -  46296322 ga-a-a----------cac
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591582  7 +  44709034 ga-a-a----------cac
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1772  7 -      1880 AG-A-A----------CAT
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270696  7 +    496798 GA-A-A----------CAT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                502  5 +      9923 GC-A-A------------T
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27901  7 -     39886 GA-A-A----------CAT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79781  7 -    217609 GA-A-A----------CTC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996648  7 +  23392119 AG-A-A----------CAT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000089  7 +  23407841 AG-A-A----------CAT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63170  7 -     66877 AG-A-A----------CAT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5342  7 -     12580 GA-G-A----------CAC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43400  7 +     53515 GA-G-A----------CAC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371328  7 -  26074798 GA-G-A----------CAC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8217  7 -     34880 GA-G-A----------CAC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67312  7 -     89041 GA-G-A----------CAC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2658  7 -      5494 GA-A-A----------CAT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492416  7 -  27778364 GA-A-A----------GAC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19249  7 +     27315 GA-A-A----------GAC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141531  7 -   4669795 ga-A-A----------CAC
i Cercocebus_atys.KQ010504.1                             I 300 C 0
s Cercocebus_chrysogaster.k141_1522556                       45274  7 +     47900 GA-A-A----------CAC
i Cercocebus_chrysogaster.k141_1522556                   I 301 C 0
s Cercocebus_lunulatus.k141_2500334                            378  7 -     14410 GA-A-A----------CAC
i Cercocebus_lunulatus.k141_2500334                      N 0 C 0
s Cercocebus_torquatus.k141_2159127                          45087  7 -    148725 GA-A-A----------CAC
i Cercocebus_torquatus.k141_2159127                      I 301 C 0
s Cercopithecus_ascanius.k141_3120866                        27291  7 -     40656 GA-A-A----------CAC
i Cercopithecus_ascanius.k141_3120866                    I 318 C 0
s Cercopithecus_cephus.k141_4183004                           7253  7 +     20796 GA-A-A----------CAC
i Cercopithecus_cephus.k141_4183004                      I 314 C 0
s Cercopithecus_diana.k141_132293                            12371  7 -     17524 GA-A-A----------CAC
i Cercopithecus_diana.k141_132293                        I 315 C 0
s Cercopithecus_hamlyni.k141_566925                          28098  7 -     34525 GA-A-A----------CAC
i Cercopithecus_hamlyni.k141_566925                      I 320 C 0
s Cercopithecus_lowei.k141_2101310                           11874  7 -     25376 GA-A-A----------CAC
i Cercopithecus_lowei.k141_2101310                       I 314 C 0
s Cercopithecus_albogularis.ctg5                                  364468  7 -  39242232 GA-A-A----------CAC
i Cercopithecus_albogularis.ctg5                               I 312 C 0
s Cercopithecus_mona.ctg39                                  270188  7 +  21565898 GA-A-A----------CAC
i Cercopithecus_mona.ctg39                               I 316 C 0
s Cercopithecus_neglectus.k141_858615                        32556  7 -     45857 GA-A-A----------CAC
i Cercopithecus_neglectus.k141_858615                    I 311 C 0
s Cercopithecus_nictitans.k141_2995370                       27457  7 -     32606 GA-A-A----------CAC
i Cercopithecus_nictitans.k141_2995370                   I 312 C 0
s Cercopithecus_petaurista.k141_42573                         3619  7 +      8499 GA-A-A----------CAC
i Cercopithecus_petaurista.k141_42573                    I 316 C 0
s Cercopithecus_pogonias.k141_6079                           26015  7 +     70610 GA-A-A----------CAC
i Cercopithecus_pogonias.k141_6079                       I 315 C 0
s Cercopithecus_roloway.k141_3012935                         22983  7 +     36323 GA-A-A----------CAC
i Cercopithecus_roloway.k141_3012935                     I 313 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13017  6 -     19938 GA-A-A----------GA-
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30859  7 -     33796 GA-A-A----------TAC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5376  7 -     15404 GA-A-A----------CAC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9217  7 -     32913 GG-A-A----------CAC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19630  7 -     40346 GG-A-A----------CAC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19885  7 +    216457 GG-A-A----------CAC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19678  7 +     39636 GG-A-A----------CAC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239002  7 -   2543920 AG-A-A----------TGT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4273  8 +      5346 TG-AGA----------CAC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42748  7 -    112038 GG-A-A----------CAC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8319  7 +     34062 GG-A-A----------CAC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343877  7 +  18827391 GA-A-A----------CAC
i Chlorocebus_aethiops.ctg25                             I 317 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10425  7 -     44032 GA-A-A----------CAC
i Chlorocebus_pygerythrus.k141_3063162                   I 317 C 0
s Chlorocebus_sabaeus.CM001947.1                            305202  7 - 135778131 GA-A-A----------CAC
i Chlorocebus_sabaeus.CM001947.1                         I 317 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15053  6 +     15858 GA-A-G----------GG-
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606628  6 -    839153 GA-A-G----------GG-
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1041  7 +      2406 AA-A-A----------TGT
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 I 68
s Colobus_angolensis.KN981557.1                             409607  7 -   2368649 ga-a-a----------cAC
i Colobus_angolensis.KN981557.1                          I 297 C 0
s Colobus_guereza.LG01                                      379488  7 - 200372422 GA-A-A----------CAC
i Colobus_guereza.LG01                                   I 302 C 0
s Colobus_polykomos.k141_906115                               3045  7 -     84244 GA-A-A----------CAC
i Colobus_polykomos.k141_906115                          I 310 C 0
s Condylura_cristata.JH655891.1                           35807482  7 +  53390261 GA-A-A----------CAC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3006  7 -      8242 GA-A-A----------CCC
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9666  7 +     12657 AG-A-A----------GAA
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4583  8 +     87169 aaaa-a----------cac
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645229  7 -   1526836 AA-C-A----------CAT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18565  7 +     50838 ag-a-a----------cat
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4569  7 +     36344 AG-A-A----------CAT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28341  7 +     75252 aG-A-A----------CGT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110369  6 -   2246927 GA-A-A----------AA-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292794  7 +  12879189 GA-A-A----------CAC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632136  7 -  35494412 aa-a-a----------cac
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330696  7 -   2620052 GA-A-A----------CAC
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664698  7 -   1390856 GA-A-A----------GAC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139493  7 -    198055 GA-A-A----------GAC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99088  7 -    115145 AG-A-A----------TGT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950728  7 -  37912305 GA-A-A----------CAC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5668  7 -     10735 GA-A-A----------CAC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62855338  6 - 111700974 ag-a-c----------tg-
i Echinops_telfairi.JH980293.1                           C 0 I 1
s Eidolon_helvum.AWHC01266696.1                               6473  7 +     19438 GA-A-A----------CAC
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239948  7 -    607251 ga-a-a----------cac
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108966  7 -  10337057 aa-a-t----------ggt
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916331  7 +  41312741 GA-A-A----------CAC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579118  5 +  14770903 GA-C-A------------C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041578  7 -   4378816 GG-A-A----------CAC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375516  7 +  39960074 GG-A-A----------CAC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             897  7 -      1194 GG-A-A----------CAC
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666283  7 +   7059049 GT-A-G----------TAC
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263405 17 +  21539334 GA-A-AGAATCTCATGCAC
i Erythrocebus_patas.Contig38                            I 317 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71345  7 -    133382 GA-A-A----------CAC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202              889  7 -      1170 GA-A-A----------CAC
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               15007  7 -     24895 GA-A-A----------CAC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42717  7 -     70999 GA-A-A----------CAC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86687  7 +    112731 GA-A-A----------CAC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43250  7 +     68309 GA-A-A----------CAC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53574  7 -     65740 GA-A-A----------CAC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24206  7 -     75513 GA-A-A----------CAC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48401  7 -     97555 GA-A-A----------CAC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5125  7 +     30972 GA-A-A----------CAC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42845  7 -     52037 GA-A-A----------CAC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59248  7 -    111500 GA-A-A----------CAC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247041  7 - 206538554 AA-A-A----------CAC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116827  7 - 205367284 AA-A-A----------CAC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27924  7 -     30238 AA-A-A----------CAC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916645  7 -   3816255 ag-a-a----------cat
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     125250  7 -    137831 GA-A-A----------CAG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8795  7 +     22493 GA-A-A----------CAG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20866  7 -     32986 GA-A-A----------CAG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1386  7 -     28519 GA-A-A----------CAC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91651  7 -     95226 ga-a-a----------cac
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34714  7 -     36801 GA-A-G----------CAC
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6038  7 -      8343 GA-A-A----------CAC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255053  7 - 186649187 ga-a-a----------cac
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2210  7 -     78134 GA-A-G----------CAC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14932  7 -     40692 GA-A-A----------CAC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36334  7 +     49394 GA-A-A----------CAC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61202  7 -     66874 GA-A-A----------CAC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10076  7 -     42923 GA-A-A----------CAC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17076  7 -     53142 GA-A-A----------CAC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31016  8 -    327341 AAAA-A----------CAC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9326  7 +     48891 ga-a-a----------cac
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932620  7 -  22651954 AG-A-A----------CTT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                 650  7 +      4291 AA-A-A----------TGT
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 I 628
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7849  7 -     36432 GA-A-A----------CAC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hoolock_leuconedys.ctg274                                    143062  7 -    630532 GA-A-A----------CAC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70180  8 +     83186 aaaa-a----------cac
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72085  7 +    143317 AG-A-A----------CAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6096  7 +     12352 GA-A-A----------CAC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13280  7 +     55766 GA-A-A----------CAC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052880  7 + 191637585 GA-A-A----------CAC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801758  7 +  11177569 GA-A-A----------CAC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4725  7 -    135385 AG-A-A----------CAT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387063  7 +   7955117 GA-A-A----------CAC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2629  7 +     11955 AA-A-A----------CAC
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10237  7 -     16823 GA-A-A----------CAC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240091  7 +   9596543 GA-A-G----------AAC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72080  7 -     97402 GA-A-A----------CAC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43493  7 +    110728 GA-G-A----------CAC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14759725  7 +  30322482 GA-A-A----------CAT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4408  7 -     13097 TA-G-A----------CAC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4162  7 +      5940 TA-G-A----------CAC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        3992  7 -      5717 TA-G-A----------CAC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10364  7 -     11567 GA-G-A----------CAC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11745  7 -     12945 GA-G-A----------CAC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9235  7 +     29618 GA-A-A----------CAC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9231  7 +     31569 GA-A-A----------CAC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9241  7 +     24756 GA-A-A----------CAC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9241  7 +     16388 GA-A-A----------CAC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813720  7 -   3914936 GA-A-A----------CAC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18090  7 +     24238 TG-A-A----------CAC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341426  7 +    662738 GA-A-A----------CAC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334416  7 -   1826925 GA-A-A----------CAC
i Lophocebus_aterrimus.ctg367                            I 300 C 0
s Loris_lydekkerianus.k141_2031736                           10816  7 +     19643 GA-A-A----------CAG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5044479  7 -   6120653 GA-A-A----------CAG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39081262  7 +  43346337 AA-A-A----------CGC
i Loxodonta_africana.GL010049.1                          C 0 I 655
s Lycaon_pictus.CM007581.1                                41614880  7 +  59628241 ga-a-a----------cac
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45811  7 -     61512 GA-A-A----------CAC
i Macaca_arctoides.k141_1757516                          I 301 C 0
s Macaca_assamensis.Contig5                                 373473  7 -  60120075 GA-A-A----------CAC
i Macaca_assamensis.Contig5                              I 301 C 0
s Macaca_cyclopis.k119_263443                                25735  7 +     30207 GA-A-A----------CAC
i Macaca_cyclopis.k119_263443                            I 300 C 0
s Macaca_fascicularis.k141_1617581                             573  7 -      5035 GA-A-A----------CAC
i Macaca_fascicularis.k141_1617581                       N 0 C 0
s Macaca_fuscata.k119_546792                                 25688  7 +     30527 GA-A-A----------CAC
i Macaca_fuscata.k119_546792                             I 300 C 0
s Macaca_leonina.k141_321385                                 36864  7 -     50087 GA-A-A----------CAC
i Macaca_leonina.k141_321385                             I 300 C 0
s Macaca_maura.k141_1103459                                  46608  7 +     51645 GA-A-A----------CAC
i Macaca_maura.k141_1103459                              I 300 C 0
s Macaca_mulatta.NC_041758.1                                415811  7 - 187317192 ga-A-A----------CAC
i Macaca_mulatta.NC_041758.1                             I 301 C 0
s Macaca_nemestrina.KQ007038.1                              400041  7 +  25927173 ga-A-A----------CAC
i Macaca_nemestrina.KQ007038.1                           I 300 C 0
s Macaca_nigra.k141_2818840                                  49213  7 -     62418 GA-A-A----------CAC
i Macaca_nigra.k141_2818840                              I 300 C 0
s Macaca_radiata.k141_2139468                                 1750  7 +     14901 GA-A-A----------CAC
i Macaca_radiata.k141_2139468                            I 301 C 0
s Macaca_siberu.k141_2185972                                 45685  7 +     59329 GA-A-A----------CAC
i Macaca_siberu.k141_2185972                             I 300 C 0
s Macaca_silenus.Contig273                                  271593  7 +    668171 GA-A-A----------CAC
i Macaca_silenus.Contig273                               I 300 C 0
s Macaca_thibetana.k99_45532                                   237  7 -      5049 GA-A-A----------CAC
i Macaca_thibetana.k99_45532                             N 0 C 0
s Macaca_tonkeana.k141_339739                                 3391  7 +     17132 GA-A-A----------CAC
i Macaca_tonkeana.k141_339739                            I 300 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223447  7 -    270270 GA-A-A----------CAC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322881  7 +  24302211 GA-A-A----------CAC
i Mandrillus_leucophaeus.scaffold280                     I 301 C 0
s Mandrillus_sphinx.Contig270                               357712  7 -    752769 GA-A-A----------CAC
i Mandrillus_sphinx.Contig270                            I 301 C 0
s Manis_javanica.JSZB01003497.1                             673768  7 -    737560 ga-a-a----------tac
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221064  7 +    317179 ga-a-a----------tac
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501283  7 +  40650429 GA-A-A----------CAC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150613  7 +    207569 GA-A-A----------CAC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26489  7 -     74585 GA-A-A----------CAC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87708  7 +     93471 GA-A-A----------CAC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10531  7 +     17804 GA-G-A----------CAC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11031  7 -     12984 GA-G-A----------CAC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19347  7 -     26561 GA-G-A----------CAC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74984842  7 +  93316391 AA-A-A----------CAC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46403  7 +    145209 AA-A-T----------TAT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185302  7 +    200668 ga-a-a----------cac
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363467  5 -   8254450 GA-A-A------------C
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42374  5 -     48117 GA-A-A------------C
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22915  7 -     27822 GA-A-A----------CAC
i Miopithecus_ogouensis.k141_1534655                     I 318 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8731  7 +     27589 GA-A-A----------CAC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52639  7 -     62432 GA-A-A----------CAC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359811  7 +    437263 aa-a-a----------cac
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179528  7 +    366855 ga-a-a----------cac
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25773  7 -     82753 ga-a-a----------cac
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18767  8 -     63510 AAAA-A----------CAC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39431  5 +     47283 GA-C-A------------C
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83771  4 -     86153 -----G----------CAC
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 2 C 0
s Mustela_putorius.JH418006.1                             14355363  7 +  14710649 ga-a-a----------cac
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63352  7 +     67721 AG-A-T----------CAT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793721  5 +  10118263 GA-C-A------------C
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387852  5 +   6019432 GA-C-A------------C
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383678  5 +   4330536 GA-C-A------------C
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2487  5 +     18357 ga-c-a------------C
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120017  6 +    130748 GA-A-G----------GA-
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              29564  7 +     34575 GA-A-A----------CAC
i Nasalis_larvatus.k141_1350636                          I 329 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232489  7 -   7148211 aa-a-a----------cac
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128498  7 -    149072 ga-c-a----------tgc
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53988  7 -    132029 GA-A-A----------CGC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10083  7 -     16345 GA-A-A----------CAC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15968  7 +     22201 GA-A-A----------CAC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414189  7 -  22158432 GA-A-A----------CAC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26366  7 -     54323 GA-A-A----------CAC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198476  7 +   9404916 GA-A-A----------CAC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636844  7 + 196305487 GA-A-A----------CAG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3598  7 -      3937 GA-A-A----------CAG
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93565103  7 - 199412804 GA-A-A----------CAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557151  7 -   3988456 TA-A-A----------TAC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055301  7 -  11899542 AG-A-A----------CAT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451938  7 +   2017862 ga-a-a----------cac
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436542  7 -    630418 ga-a-a----------cac
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14534  7 +    150152 ga-a-a----------cac
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8102879  7 +  10937097 tt-t-t----------cac
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_1597630                25  7 -       378 AA-A-C----------TAT
i Orycteropus_afer.OryAfe_flattened_line_1597630         C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103888  7 - 174332312 TG-A-A----------CAC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39521  7 +    559221 ga-a-a----------cac
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26404446  7 -  44047080 ga-a-a----------cac
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4965  7 +     17875 ga-a-a----------cac
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473082  7 - 189151597 ga-a-a----------cac
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24747  7 -    230217 aa-a-a----------cac
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462073  7 -  18783137 AA-A-A----------CAC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972732  7 +   8748460 AA-A-A----------CAC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615974  7 +   2937107 ga-a-a----------cac
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243713  7 - 183742232 ga-A-A----------CAC
i Papio_anubis.CM001495.2                                I 300 C 0
s Papio_cynocephalus.k141_1507553                            10175  7 +     21308 GA-A-A----------CAC
i Papio_cynocephalus.k141_1507553                        I 300 C 0
s Papio_hamadryas.Contig39                                  292748  7 -  20919399 GA-A-A----------CAC
i Papio_hamadryas.Contig39                               I 300 C 0
s Papio_kindae.k141_2214839                                  22823  7 -     27687 GA-A-A----------CAC
i Papio_kindae.k141_2214839                              I 300 C 0
s Papio_papio.k141_799093                                    15969  7 +     16796 GA-A-A----------CAC
i Papio_papio.k141_799093                                I 300 C 0
s Papio_ursinus.k141_2278143                                 22780  7 -     23640 GA-A-A----------CAC
i Papio_ursinus.k141_2278143                             I 300 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15344  7 +     78924 AA-A-A----------CAC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26595  7 +     31479 AA-A-A----------CAG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18965  7 -     24908 AA-A-A----------CAG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2068  7 +      9367 GA-A-A----------CAT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32208  7 -     56120 AG-A-G----------TGT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4405  7 -     63832 aa-a-a----------cac
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            2999  7 +     55023 GA-A-A----------CAC
i Piliocolobus_badius.k141_2704958                       I 305 C 0
s Piliocolobus_gordonorum.k141_381342                         2537  7 -     89929 GA-A-A----------CAC
i Piliocolobus_gordonorum.k141_381342                    I 293 C 0
s Piliocolobus_kirkii.k141_1310104                            3127  7 +     40849 GA-A-A----------CAC
i Piliocolobus_kirkii.k141_1310104                       I 294 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254801  7 +  14605196 ga-a-a----------cac
i Piliocolobus_tephrosceles.PDMG02000141.1               I 304 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4026  5 +     22231 GA-C-A------------C
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65115  7 +    207309 GG-A-A----------CAC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6207  7 -     25401 GG-A-A----------CAC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               31951  7 +     58159 GG-A-A----------CAC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32227  7 +     63561 GG-A-A----------CAC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           31987  7 +     51148 GG-A-A----------CAC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              556957  7 -   4542175 GG-A-A----------CAC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           31971  7 +     51125 GG-A-A----------CAC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1403  7 +     19503 GA-A-A----------CAC
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8382  7 +     39866 GG-A-A----------CAC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3464  7 -      9282 GG-A-A----------CAC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42868  7 -     87950 GG-A-A----------CAC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43264  7 -     88961 GG-A-A----------CAC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          7960  7 -     39403 GG-A-A----------CAC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42911  7 +     87928 GG-A-A----------CAC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          7959  7 -     60166 GG-A-A----------CAC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14896  7 -     67232 GG-A-A----------CAC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42812  7 -     90634 GG-A-A----------CAC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44279  7 +     89403 GG-A-A----------CAC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178191  7 - 189387572 ga-a-a----------cac
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193008  7 -   9816681 GA-A-A----------CAC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28146  6 +     69807 GA-A-A----------CA-
i Presbytis_comata.k141_1230337                          I 328 C 0
s Presbytis_mitrata.k141_584736                              45327  6 -     80239 GA-A-A----------CA-
i Presbytis_mitrata.k141_584736                          I 327 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                  423  7 +      7663 AA-A-A----------TGT
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 680
s Prolemur_simus.MPIZ01000396.1                            1982873  7 +   4620579 GA-A-A----------CAC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566380  7 -   2598838 GA-A-A----------CAC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4018  7 -      7103 GA-A-A----------CAC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4615  7 -     11706 GA-A-A----------CAC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8353  7 -     30655 GA-A-A----------CAC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34666  7 +     46564 GA-A-A----------CAC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94945  7 -     98465 GA-A-A----------CAC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8584  7 +     35169 GA-A-A----------CAC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52422  7 -     66298 GA-A-A----------TGC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4936  7 -     18639 GA-A-A----------CAC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099390  7 +  38429054 AA-A-A----------CAC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27520  7 +     91421 GA-A-A----------CAC
i Pygathrix_cinerea.k141_1153803                         I 328 C 0
s Pygathrix_nigripes_b.ctg100                                  154004  7 -   7812017 GA-A-A----------CAC
i Pygathrix_nigripes_b.ctg100                               I 320 C 0
s Pygathrix_nigripes_a.k141_215492                              8377  7 +     72585 GA-A-A----------CAC
i Pygathrix_nigripes_a.k141_215492                         I 318 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53461  7 +     55069 ga-a-a----------cac
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2098  7 +      7119 AA-A-A----------CAA
i Rhinopithecus_bieti.k119_778604                        I 333 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122714  7 + 195417433 ga-a-a----------cac
i Rhinopithecus_roxellana.NC_044550.1                    I 342 C 0
s Rhinopithecus_strykeri.ctg102                             236940  7 -   7961872 GA-A-A----------CAC
i Rhinopithecus_strykeri.ctg102                          I 325 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75058  7 -    116970 GA-A-A----------CAC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4272  7 +     27962 GA-G-A----------CAC
i Saguinus_bicolor.k141_1429097                          I 1 C 0
s Saguinus_geoffroyi.k141_3779887                             4166  7 +      6077 GA-G-A----------CAC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4256  7 +      5971 GA-G-A----------CAC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4177  7 +      5932 GA-G-A----------CAC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2519  7 -      4390 GA-G-A----------CAC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       391956  7 - 209938924 GA-G-A----------CAC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4126  7 +      5979 GA-G-A----------CAC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                695  7 -     22275 GA-G-A----------CAC
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8134  7 +     16473 ga-a-a----------cac
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109293  7 + 121099817 GA-G-A----------CAC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30860  7 -     47369 GA-G-A----------CAC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31246  7 -     79414 GA-G-A----------CAC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              27937  7 -     34454 GA-G-A----------CAC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15338  7 -     22428 GA-G-A----------CAC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30492  7 -     47109 GA-G-A----------CAC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238536  7 +   5703754 GA-G-A----------CAC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8126  7 +     21866 GA-G-A----------CAC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116177  7 +    313613 GA-A-A----------CAC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25839  7 +     27374 GA-A-A----------CAC
i Semnopithecus_entellus.k141_158471                     I 328 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29351  7 +     58920 GA-A-A----------CAC
i Semnopithecus_hypoleucos.k141_1910531                  I 326 C 0
s Semnopithecus_johnii.k141_843753                           15849  7 -     45317 GA-A-A----------CAC
i Semnopithecus_johnii.k141_843753                       I 328 C 0
s Semnopithecus_priam.k141_714795                            23507  7 -     42441 GA-A-A----------CAC
i Semnopithecus_priam.k141_714795                        I 327 C 0
s Semnopithecus_schistaceus.k141_1432920                     26185  7 -     29113 GA-A-A----------CAC
i Semnopithecus_schistaceus.k141_1432920                 I 327 C 0
s Semnopithecus_vetulus.k141_244474                          29260  7 -     48123 GA-A-A----------CAC
i Semnopithecus_vetulus.k141_244474                      I 328 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864457  7 -   1910179 GA-A-A----------TAT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671595  7 +  18376816 GC-A-A----------TAC
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868642  7 +   3870691 GA-A-A----------CAC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7020  7 -     97271 GA-A-A----------CAC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125169  8 +    196729 AAAA-A----------CAC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644040  7 +  69701581 GA-A-A----------CAC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391448  7 +   1523678 GA-A-A----------CAC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14589  5 +     22964 GA-A-A------------C
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3006  6 +      5583 GA-A-G----------GG-
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191893  7 +    199430 ga-a-a----------cac
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105863  7 -    539355 ga-a-a----------cac
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 929  7 +      9917 GA-A-A----------CAT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7727  7 +     20590 GA-A-A----------CAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353699  7 - 186847797 ga-A-A----------CAC
i Theropithecus_gelada.CM009954.1                        I 300 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24367  7 -     33621 AG-A-G----------GGT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20109  6 -     31044 GA-A-A----------GA-
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480419  7 -    610378 GA-A-A----------CAC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21384  7 +     26378 GA-A-A----------CAC
i Trachypithecus_auratus.k141_1189070                    I 327 C 0
s Trachypithecus_crepusculus.k141_539312                     34060  7 -     78344 GA-A-A----------CAC
i Trachypithecus_crepusculus.k141_539312                 I 325 C 0
s Trachypithecus_cristatus.k141_180416                       20709  7 +     25722 GA-A-A----------CAC
i Trachypithecus_cristatus.k141_180416                   I 327 C 0
s Trachypithecus_francoisi.k141_1453105                      29016  7 -     62838 GA-A-A----------CAC
i Trachypithecus_francoisi.k141_1453105                  I 328 C 0
s Trachypithecus_geei.k141_1001272                           29060  7 +     46913 GA-A-A----------CAC
i Trachypithecus_geei.k141_1001272                       I 327 C 0
s Trachypithecus_germaini.k141_57262                          9869  7 -     28527 GA-A-A----------CAC
i Trachypithecus_germaini.k141_57262                     I 329 C 0
s Trachypithecus_hatinhensis.k141_31479                      30951  7 -     64340 GA-A-A----------CAC
i Trachypithecus_hatinhensis.k141_31479                  I 327 C 0
s Trachypithecus_laotum.k141_928651                          28989  7 -     63452 GA-A-A----------CAC
i Trachypithecus_laotum.k141_928651                      I 328 C 0
s Trachypithecus_leucocephalus.k141_96450                    10436  7 +     22490 GA-A-A----------CAC
i Trachypithecus_leucocephalus.k141_96450                I 329 C 0
s Trachypithecus_melamera.k141_591572                         3859  7 -      6147 GA-A-A----------CAC
i Trachypithecus_melamera.k141_591572                    I 327 C 0
s Trachypithecus_obscurus.k141_848057                        10772  7 -     13050 GA-A-A----------CAC
i Trachypithecus_obscurus.k141_848057                    I 335 C 0
s Trachypithecus_phayrei.ctg124                             256002  7 -   6242583 GA-A-A----------CAC
i Trachypithecus_phayrei.ctg124                          I 325 C 0
s Trachypithecus_pileatus.k141_2622778                        2030  7 +     19340 GA-A-A----------CAC
i Trachypithecus_pileatus.k141_2622778                   I 329 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173746  7 -    200418 ga-a-a----------cac
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480729  6 -  10818551 AG-A-A----------TG-
i Trichechus_manatus.JH594705.1                          C 0 I 1
s Tupaia_chinensis.KB320699.1                              1834391  7 -   4065304 aa-a-a----------tat
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8416  7 -     70247 GA-A-A----------TAt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17365992  7 -  33153633 GA-A-A----------CAC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3914  7 -     21056 AA-A-G----------CAT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182108  7 +   5085361 ga-a-a----------cac
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25521  7 -     30710 GA-A-A----------CAC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24428  7 -    147434 GA-A-A----------CAC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76572  7 +   5488506 AA-A-A----------CAC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105242  7 -    112863 ga-a-a----------cac
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174433  7 -    224448 GA-A-A----------CAC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29146  7 -     86975 ga-a-a----------cac
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1283  7 +      2126 GA-A-A----------CAC
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Nannospalax_galili.KL204047.1                             946529  0 +   3037898 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Otolemur_garnettii.GL873799.1                             353412  0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        40409  0 -     51505 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Zapus_hudsonius.ZapHud_scaffold_286923                       349  0 -      1899 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    49496  0 +     77746 C
e Rhinolophus_sinicus.LVEH01000134.1                       2915004  0 +   3329780 C
e Rattus_norvegicus.chr16                                 37023009  0 -  90668790 C
e Pteropus_vampyrus.KN525825.1                             3537603  0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5841088  0 -  28871421 C
e Psammomys_obesus.NESX01036366.1                            37726  0 +     52041 C
e Peromyscus_maniculatus.KI615324.1                         247118  0 +  18517816 C
e Onychomys_torridus.OnyTor_scaffold_28377                    3921  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    93043  0 -    140218 C
e Mus_spretus.CM004101.1                                  39497085  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Mus_musculus.chr8                                       41687792  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35593406  0 + 120012414 C
e Microtus_ochrogaster.CM001695.1                         15962686  0 +  27267610 C
e Mesocricetus_auratus.KB708134.1                         17429483  0 +  29670104 C
e Meriones_unguiculatus.MerUng_scaffold_7390                 50384  0 -    140813 C
e Lasiurus_borealis.LasBor_scaffold_16567                    63109 54 -     65777 I
e Hipposideros_galeritus.HipGal_scaffold_164997               1290  0 -      2730 C
e Hipposideros_armiger.JXIK01000431.1                      1551841  0 -   1711038 C
e Ellobius_talpinus.LOJH01026522.1                           13217  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          31246  0 +    110024 C
e Cricetulus_griseus.LT883664.1                          213115097  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 44532  0 -     83289 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     25388  0 +     63021 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       5745 3 +     36723 TCT
s Acinonyx_jubatus.LLWD01001279.1                           813139 3 +   1699592 CCT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25388 2 +     63021 -CT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415600 3 +  29979442 tct
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215935 3 +    347723 tct
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18355 3 -     61208 TAT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 3
s Allenopithecus_nigroviridis.k141_3755588                   48382 3 +     53615 TCT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           413 3 +     13857 TCT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16963 3 -     21945 TCT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18649 3 +     32033 TCT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72484 3 -     84148 TCT
i Alouatta_belzebul.k141_1011583                         C 0 I 12
s Alouatta_caraya.k141_1109140                               44723 3 -     78289 TCT
i Alouatta_caraya.k141_1109140                           C 0 I 12
s Alouatta_discolor.k141_2561099                             44162 3 +     55831 TCT
i Alouatta_discolor.k141_2561099                         C 0 I 12
s Alouatta_juara.k141_1687208                                42612 3 -     64179 TCT
i Alouatta_juara.k141_1687208                            C 0 I 12
s Alouatta_macconnelli.k141_361275                           24246 3 -     24835 TCT
i Alouatta_macconnelli.k141_361275                       C 0 I 12
s Alouatta_nigerrima.k141_376068                             41237 3 +     45454 TCT
i Alouatta_nigerrima.k141_376068                         C 0 I 12
s Alouatta_palliata.k141_638677                              46886 3 +     70886 TCT
i Alouatta_palliata.k141_638677                          C 0 I 12
s Alouatta_puruensis.k141_251022                              9059 3 +     30854 TCT
i Alouatta_puruensis.k141_251022                         C 0 I 12
s Alouatta_seniculus.k141_928287                             33193 3 +     42133 TCT
i Alouatta_seniculus.k141_928287                         C 0 I 12
s Ammotragus_lervia.NIVO01071767.1                         1585586 3 +   2318259 ccT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177385 3 -    412891 TCT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50692 3 -     68529 ccT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1451 3 +     17741 TCT
i Aotus_azarae.k141_887050                               C 0 I 12
s Aotus_griseimembra.k141_3192254                             2076 3 -     15923 TCT
i Aotus_griseimembra.k141_3192254                        C 0 I 12
s Aotus_nancymaae.KZ198451.1                                672358 3 +   5030052 TCT
i Aotus_nancymaae.KZ198451.1                             C 0 I 12
s Aotus_trivirgatus.k141_318729                               2352 3 -     16391 TCT
i Aotus_trivirgatus.k141_318729                          C 0 I 12
s Aotus_vociferans.k141_1514463                               1911 3 -     17186 TCT
i Aotus_vociferans.k141_1514463                          C 0 I 12
s Aplodontia_rufa.AprRuf_scaffold_46868                      16424 3 -     32367 TCT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19807 3 -     45910 CCT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5651 3 -     15198 TCT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274948 2 +  21539123 -CT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 12
s Ateles_belzebuth.k141_1572163                              11114 2 +     48076 -CT
i Ateles_belzebuth.k141_1572163                          C 0 I 14
s Ateles_chamek.k141_615173                                   6251 2 -     28759 -CT
i Ateles_chamek.k141_615173                              C 0 I 12
s Ateles_geoffroyi_a.k141_1283730                              33805 2 +     44353 -CT
i Ateles_geoffroyi_a.k141_1283730                          C 0 I 12
s Ateles_marginatus.k141_970259                              49174 2 -     71267 -CT
i Ateles_marginatus.k141_970259                          C 0 I 14
s Ateles_paniscus.k141_866194                                23234 2 -     33135 -CT
i Ateles_paniscus.k141_866194                            C 0 I 12
s Avahi_laniger.k141_2756659                                  6492 3 +     11645 TCT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6500 3 -     19611 TCT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963735 3 -  23207421 TCT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          235 3 -     25979 TCT
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86594 3 +    124022 ccT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22127 3 +    288883 cct
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356519 3 +  48749331 cct
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755083 3 +   1948126 cct
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545225 3 -  45695690 cct
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530246 3 -   4408762 cct
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8124 3 +     28062 TCT
i Cacajao_ayresi.k141_96119                              C 0 I 12
s Cacajao_calvus.k141_89051                                  43418 3 -     91139 TCT
i Cacajao_calvus.k141_89051                              C 0 I 12
s Cacajao_hosomi.k141_81245                                  20944 3 +     95584 TCT
i Cacajao_hosomi.k141_81245                              C 0 I 12
s Cacajao_melanocephalus.k141_619699                         20857 3 +    119600 TCT
i Cacajao_melanocephalus.k141_619699                     C 0 I 12
s Callibella_humilis.k141_1233062                            10431 3 +     18648 TCT
i Callibella_humilis.k141_1233062                        C 0 I 12
s Callimico_goeldii.k141_1609886                              9966 3 -     13885 TCT
i Callimico_goeldii.k141_1609886                         C 0 I 12
s Callithrix_geoffroyi.k119_459277                            2036 3 -      8861 TCT
i Callithrix_geoffroyi.k119_459277                       C 0 I 12
s Callithrix_jacchus.pat_scaffold_3                      165454428 3 + 189096842 TCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 12
s Callithrix_kuhlii.k119_102356                               1951 3 +      8664 TCT
i Callithrix_kuhlii.k119_102356                          C 0 I 12
s Camelus_bactrianus.KN276810.1                            7631246 3 +  17673402 TCT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665532 3 +   7040546 TCT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209192 3 +   1652518 TCT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505618 3 +  60362399 tct
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9254 3 -     23171 TCT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222597 3 +   9314153 TCT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615732 3 +  59632846 tct
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107313 3 -  63665305 TCT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409315 3 -  46296322 ccT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591589 3 +  44709034 ccT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1779 3 -      1880 TCT
i Capromys_pilorides.CapPil_scaffold_652123              C 0 I 15
s Carlito_syrichta.NW_007259797.1                           270703 3 +    496798 TCT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                507 3 +      9923 TCT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27908 3 -     39886 TTT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79788 3 -    217609 TCT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996655 3 +  23392119 TCT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000096 3 +  23407841 TCT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63177 3 -     66877 TCT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5349 3 -     12580 TCT
i Cebuella_niveiventris.k141_592277                      C 0 I 12
s Cebuella_pygmaea.k141_145798                               43407 3 +     53515 TCT
i Cebuella_pygmaea.k141_145798                           C 0 I 12
s Cebus_albifrons.Contig27                                  371335 3 -  26074798 TCT
i Cebus_albifrons.Contig27                               C 0 I 12
s Cebus_olivaceus.k141_1404781                                8224 3 -     34880 TCT
i Cebus_olivaceus.k141_1404781                           C 0 I 12
s Cebus_unicolor.k141_1654760                                67319 3 -     89041 TCT
i Cebus_unicolor.k141_1654760                            C 0 I 12
s Cephalopachus_bancanus.k141_1689090                         2665 3 -      5494 TCT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492423 3 -  27778364 TCT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19256 3 +     27315 TCT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141538 3 -   4669795 TCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45281 3 +     47900 TCT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            385 3 -     14410 TCT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45094 3 -    148725 TCT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27298 2 -     40656 TC-
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7260 3 +     20796 TCT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12378 3 -     17524 TCT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28105 3 -     34525 TCT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11881 3 -     25376 TCT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364475 3 -  39242232 TCT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270195 3 +  21565898 TCT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32563 3 -     45857 TCT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27464 3 -     32606 TCT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3626 3 +      8499 TCT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26022 3 +     70610 TCT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22990 3 +     36323 TCT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13023 2 -     19938 -CT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             30866 3 -     33796 TGT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5383 3 -     15404 TCT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9224 3 -     32913 TCT
i Cheracebus_lucifer.k141_2312002                        C 0 I 12
s Cheracebus_lugens.k141_1179667                             19637 3 -     40346 TCT
i Cheracebus_lugens.k141_1179667                         C 0 I 12
s Cheracebus_regulus.k141_471822                             19892 3 +    216457 TCT
i Cheracebus_regulus.k141_471822                         C 0 I 12
s Cheracebus_torquatus.k141_890198                           19685 3 +     39636 TCT
i Cheracebus_torquatus.k141_890198                       C 0 I 12
s Chinchilla_lanigera.JH722012.1                           1239009 3 -   2543920 TCT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4281 3 +      5346 TCT
i Chiropotes_albinasus.k141_1946120                      C 0 I 12
s Chiropotes_israelita.k141_313004                           42755 3 -    112038 TCT
i Chiropotes_israelita.k141_313004                       C 0 I 12
s Chiropotes_sagulatus.k141_1113111                           8326 3 +     34062 TCT
i Chiropotes_sagulatus.k141_1113111                      C 0 I 12
s Chlorocebus_aethiops.ctg25                                343884 3 +  18827391 TCT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10432 3 -     44032 TGT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305209 3 - 135778131 TCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15059 2 +     15858 -TT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606634 2 -    839153 -TT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_1700486               635 3 +       798 TCT
i Chrysochloris_asiatica.ChrAsi_scaffold_1700486         n 68 C 0
s Colobus_angolensis.KN981557.1                             409614 3 -   2368649 TCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379495 3 - 200372422 TCT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3052 3 -     84244 TCT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807489 2 +  53390261 TC-
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3013 3 -      8242 TCT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115097 2 - 224834208 -CT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9673 1 +     12657 T--
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4591 3 +     87169 cct
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18572 3 +     50838 tcT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4576 3 +     36344 TCT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 13
s Dasyprocta_punctata.DasPun_flattened_line_15900            28348 3 +     75252 TCT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110375 2 -   2246927 -CT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292801 3 +  12879189 TCT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632143 3 -  35494412 tct
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330703 3 -   2620052 TCT
i Desmodus_rotundus.KZ672366.1                           C 0 I 67
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664705 3 -   1390856 TCT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139500 3 -    198055 TCT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99095 3 -    115145 TCT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950735 3 -  37912305 GCA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5675 3 -     10735 GCA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6480 3 +     19438 TCT
i Eidolon_helvum.AWHC01266696.1                          C 0 I 6
s Elaphurus_davidianus.JRFZ01104969.1                       239955 3 -    607251 ccT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9108973 1 -  10337057 g--
i Elephantulus_edwardii.JH947257.1                       C 0 I 58
s Ellobius_lutescens.LOEQ01008920.1                          31246 2 +    110024 -CT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13217 2 +     18970 -CT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916338 3 +  41312741 TCT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579123 3 +  14770903 TCT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041585 3 -   4378816 TCT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375523 3 +  39960074 TCT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             904 3 -      1194 TCT
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666290 3 +   7059049 TCT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263422 3 +  21539334 TCT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71352 3 -    133382 TCT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202              896 3 -      1170 TCT
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               15014 3 -     24895 TCT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42724 3 -     70999 TCT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86694 3 +    112731 TCT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43257 3 +     68309 TCT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53581 3 -     65740 TCT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24213 3 -     75513 TCT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48408 3 -     97555 TCT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5132 3 +     30972 TCT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42852 3 -     52037 TCT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59255 3 -    111500 TCT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247048 3 - 206538554 CCT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116834 3 - 205367284 CCT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27931 3 -     30238 CCT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916652 3 -   3816255 tct
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     125257 3 -    137831 TCT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8802 3 +     22493 TCT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20873 3 -     32986 CCT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1393 3 -     28519 CCT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91658 3 -     95226 ccT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34721 3 -     36801 AGT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6045 3 -      8343 TCT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255060 3 - 186649187 tct
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2217 3 -     78134 TGT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          14939 3 -     40692 TCT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36341 3 +     49394 TCT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61209 3 -     66874 TCT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10083 3 -     42923 TCT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17083 3 -     53142 TCT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31024 3 -    327341 CCT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9333 3 +     48891 ccT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932627 3 -  22651954 TCT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                1285 3 +      4291 CCT
i Heterohyrax_brucei.HetBruBak_scaffold_154059           I 628 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7856 3 -     36432 TCT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hoolock_leuconedys.ctg274                                    143069 3 -    630532 TCT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70188 3 +     83186 cct
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72092 3 +    143317 TCT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6103 3 +     12352 TCT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13287 3 +     55766 TCT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052887 3 + 191637585 TCT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801765 3 +  11177569 TCT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4732 3 -    135385 TCT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387070 3 +   7955117 TCT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2636 3 +     11955 TCT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10244 3 -     16823 TCT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240098 3 +   9596543 TAT
i Jaculus_jaculus.JH725527.1                             C 0 I 13
s Kogia_breviceps.KogBre_flattened_line_3970                 72087 3 -     97402 TCT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43500 3 +    110728 TCT
i Lagothrix_lagothricha.k141_246028                      C 0 I 12
s Lemur_catta.scaffold_24                                 14759732 3 +  30322482 TCT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4415 3 -     13097 TCT
i Leontocebus_fuscicollis.k141_2994775                   C 0 I 12
s Leontocebus_illigeri.k141_2951200                           4169 3 +      5940 TCT
i Leontocebus_illigeri.k141_2951200                      C 0 I 12
s Leontocebus_nigricollis.k141_3905062                        3999 3 -      5717 TCT
i Leontocebus_nigricollis.k141_3905062                   C 0 I 12
s Leontopithecus_chrysomelas.k141_1327670                    10371 3 -     11567 TCT
i Leontopithecus_chrysomelas.k141_1327670                C 0 I 12
s Leontopithecus_rosalia.k141_349454                         11752 3 -     12945 TCT
i Leontopithecus_rosalia.k141_349454                     C 0 I 12
s Lepilemur_ankaranensis.k141_567626                          9242 3 +     29618 TCT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9238 3 +     31569 TCT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9248 3 +     24756 TCT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9248 3 +     16388 TCT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813727 3 -   3914936 TCT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18097 1 +     24238 --T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341433 3 +    662738 TCT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334423 3 -   1826925 TCT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10823 3 +     19643 CCT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5044486 3 -   6120653 CCT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39081924 3 +  43346337 TCC
i Loxodonta_africana.GL010049.1                          I 655 I 15
s Lycaon_pictus.CM007581.1                                41614887 3 +  59628241 tct
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45818 3 -     61512 TCT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373480 3 -  60120075 TCT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25742 3 +     30207 TCT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             580 3 -      5035 TCT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25695 3 +     30527 TCT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36871 3 -     50087 TCT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46615 3 +     51645 TCT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415818 3 - 187317192 TCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400048 3 +  25927173 TCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49220 3 -     62418 TCT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1757 3 +     14901 TCT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45692 3 +     59329 TCT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271600 3 +    668171 TCT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   244 3 -      5049 TCT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3398 3 +     17132 TCT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223454 3 -    270270 TCT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 2
s Mandrillus_leucophaeus.scaffold280                        322888 3 +  24302211 TCT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357719 3 -    752769 TCT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673775 3 -    737560 tct
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221071 3 +    317179 tct
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501290 3 +  40650429 TCT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150620 3 +    207569 TCT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26496 3 -     74585 TCT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50384 2 -    140813 -GT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429483 2 +  29670104 -CT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87715 3 +     93471 TCT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10538 3 +     17804 TCT
i Mico_argentatus.k141_582562                            C 0 I 12
s Mico_humeralifer.k141_1180625                              11038 3 -     12984 TCT
i Mico_humeralifer.k141_1180625                          C 0 I 12
s Mico_schneideri.k141_1877700                                     19354 3 -     26561 TCT
i Mico_schneideri.k141_1877700                                 C 0 I 12
s Microcebus_murinus.CM007674.1                           74984849 3 +  93316391 TCT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46410 3 +    145209 TAC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185309 1 +    200668 --t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962686 2 +  27267610 -cT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363472 1 -   8254450 --T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42379 1 -     48117 --T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22922 3 -     27822 TCT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8738 3 +     27589 TCT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52646 3 -     62432 TCT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359818 3 +    437263 tct
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179535 3 +    366855 tct
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25780 3 -     82753 ccT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18775 3 -     63510 CCT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39436 3 +     47283 TCT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593406 2 + 120012414 -CT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687792 2 + 129401213 -CT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497085 2 + 130317789 -CT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83775 3 -     86153 TCT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355370 3 +  14710649 tct
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63359 3 +     67721 TCT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 15
s Myotis_brandtii.KE162005.1                               9793726 1 +  10118263 --T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387857 1 +   6019432 --T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383683 1 +   4330536 --T
i Myotis_lucifugus.GL429869.1                            C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_66571                         2494 1 +     18357 --T
i Myotis_myotis.MyoMyo_scaffold_66571                    I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120023 2 +    130748 -CT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946529 2 +   3037898 -cc
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29571 3 +     34575 TCT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232496 3 -   7148211 tct
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128505 3 -    149072 tct
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53995 3 -    132029 TCT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10090 3 -     16345 TCT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15975 3 +     22201 TCT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414196 3 -  22158432 TCT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26373 3 -     54323 TCT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198483 3 +   9404916 TCT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636851 3 + 196305487 CCT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3605 3 -      3937 CCT
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93565110 3 - 199412804 CCT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557158 3 -   3988456 TCT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055308 3 -  11899542 TTT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451945 3 +   2017862 tct
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436549 3 -    630418 ccT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14541 3 +    150152 ccT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93043 2 -    140218 -CT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3921 2 -     41509 -ct
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8102886 3 +  10937097 tct
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_1597630                32 3 -       378 TCT
i Orycteropus_afer.OryAfe_flattened_line_1597630         C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103895 1 - 174332312 --T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39528 3 +    559221 tct
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26404453 3 -  44047080 ccT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4972 3 +     17875 ccT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473089 3 - 189151597 tct
i Pan_troglodytes.CM009242.2                             C 0 I 66
s Panthera_onca.PanOnc_flattened_line_3271                   24754 3 -    230217 cct
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462080 3 -  18783137 CCT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972739 3 +   8748460 CCT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615981 3 +   2937107 ccT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243720 3 - 183742232 TCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10182 3 +     21308 TCT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292755 3 -  20919399 TCT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22830 3 -     27687 TCT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15976 3 +     16796 TCT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22787 3 -     23640 TCT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15351 3 +     78924 CCT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26602 3 +     31479 CCT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18972 3 -     24908 CCT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2075 3 +      9367 TCA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247118 2 +  18517816 -TG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32215 3 -     56120 TCT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4412 3 -     63832 tct
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3006 3 +     55023 TCT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2544 3 -     89929 TCT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3134 3 +     40849 TCT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254808 3 +  14605196 tct
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4031 3 +     22231 TCT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65122 3 +    207309 TCT
i Pithecia_albicans.k141_1239476                         C 0 I 12
s Pithecia_chrysocephala.k141_785207                          6214 3 -     25401 TCT
i Pithecia_chrysocephala.k141_785207                     C 0 I 12
s Pithecia_hirsuta.k141_640380                               31958 3 +     58159 TCT
i Pithecia_hirsuta.k141_640380                           C 0 I 12
s Pithecia_mittermeieri.k141_1280039                         32234 3 +     63561 TCT
i Pithecia_mittermeieri.k141_1280039                     C 0 I 12
s Pithecia_pissinattii.k141_878371                           31994 3 +     51148 TCT
i Pithecia_pissinattii.k141_878371                       C 0 I 12
s Pithecia_pithecia.tarseq_165                              556964 3 -   4542175 TCT
i Pithecia_pithecia.tarseq_165                           C 0 I 12
s Pithecia_vanzolinii.k141_1369553                           31978 3 +     51125 TCT
i Pithecia_vanzolinii.k141_1369553                       C 0 I 12
s Platanista_gangetica.PlaMin_flattened_line_83166            1410 3 +     19503 TCT
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8389 3 +     39866 TCT
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 12
s Plecturocebus_brunneus.k141_862875                          3471 3 -      9282 TCT
i Plecturocebus_brunneus.k141_862875                     C 0 I 12
s Plecturocebus_caligatus.k141_1382851                       42875 3 -     87950 TCT
i Plecturocebus_caligatus.k141_1382851                   C 0 I 12
s Plecturocebus_cinerascens.k141_1164729                     43271 3 -     88961 TCT
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 12
s Plecturocebus_cupreus.k141_2351393                          7967 3 -     39403 TCT
i Plecturocebus_cupreus.k141_2351393                     C 0 I 12
s Plecturocebus_dubius.k141_1058799                          42918 3 +     87928 TCT
i Plecturocebus_dubius.k141_1058799                      C 0 I 12
s Plecturocebus_grovesi.k141_2013005                          7966 3 -     60166 TCT
i Plecturocebus_grovesi.k141_2013005                     C 0 I 12
s Plecturocebus_hoffmannsi.k141_3303950                      14903 3 -     67232 TCT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 12
s Plecturocebus_miltoni.k141_349282                          42819 3 -     90634 TCT
i Plecturocebus_miltoni.k141_349282                      C 0 I 12
s Plecturocebus_moloch.k141_1031110                          44286 3 +     89403 TCT
i Plecturocebus_moloch.k141_1031110                      C 0 I 12
s Pongo_abelii.CM009266.2                                   178198 3 - 189387572 tct
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193015 3 -   9816681 TCT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28152 2 +     69807 -CT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45333 2 -     80239 -CT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 1110 3 +      7663 CCT
i Procavia_capensis.ProCapCap_scaffold_165387            I 680 C 0
s Prolemur_simus.MPIZ01000396.1                            1982880 3 +   4620579 TCT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566387 3 -   2598838 TCT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4025 3 -      7103 TCT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4622 3 -     11706 TCT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8360 3 -     30655 TCT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34673 3 +     46564 TCT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94952 3 -     98465 TCT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8591 3 +     35169 TCT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37726 2 +     52041 -GT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52429 3 -     66298 CCT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4943 3 -     18639 TCT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099397 3 +  38429054 CCT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27527 3 +     91421 TCT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154011 3 -   7812017 TCT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8384 3 +     72585 TCT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53468 3 +     55069 cct
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 1
s Rattus_norvegicus.chr16                                 37023009 2 -  90668790 -CA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2105 3 +      7119 TTT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122721 3 + 195417433 tct
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236947 3 -   7961872 TCT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75065 3 -    116970 TCT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 6
s Saguinus_bicolor.k141_1429097                               4279 3 +     27962 TCT
i Saguinus_bicolor.k141_1429097                          C 0 I 12
s Saguinus_geoffroyi.k141_3779887                             4173 3 +      6077 TCT
i Saguinus_geoffroyi.k141_3779887                        C 0 I 12
s Saguinus_imperator.k141_1898058                             4263 3 +      5971 TCT
i Saguinus_imperator.k141_1898058                        C 0 I 12
s Saguinus_inustus.k141_2469308                               4184 3 +      5932 TCT
i Saguinus_inustus.k141_2469308                          C 0 I 12
s Saguinus_labiatus.k141_2380921                              2526 3 -      4390 TCT
i Saguinus_labiatus.k141_2380921                         C 0 I 12
s Saguinus_midas.LG03                                       391963 3 - 209938924 TCT
i Saguinus_midas.LG03                                    C 0 I 12
s Saguinus_mystax.k141_8077960                                4133 3 +      5979 TCT
i Saguinus_mystax.k141_8077960                           C 0 I 12
s Saguinus_oedipus.k141_1280589                                702 3 -     22275 TCT
i Saguinus_oedipus.k141_1280589                          C 0 I 12
s Saiga_tatarica.SaiTat_scaffold_39512                        8141 3 +     16473 ccT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109300 3 + 121099817 TCT
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 12
s Saimiri_cassiquiarensis.k141_1467335                       30867 3 -     47369 TCT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 I 12
s Saimiri_macrodon.k141_1173117                              31253 3 -     79414 TCT
i Saimiri_macrodon.k141_1173117                          C 0 I 12
s Saimiri_oerstedii.k141_245838                              27944 3 -     34454 TCT
i Saimiri_oerstedii.k141_245838                          C 0 I 12
s Saimiri_sciureus.k141_1467173                              15345 3 -     22428 TCT
i Saimiri_sciureus.k141_1467173                          C 0 I 12
s Saimiri_ustus.k141_360372                                  30499 3 -     47109 TCT
i Saimiri_ustus.k141_360372                              C 0 I 12
s Sapajus_apella.ctg103                                     238543 3 +   5703754 TCT
i Sapajus_apella.ctg103                                  C 0 I 12
s Sapajus_macrocephalus.k141_796559                           8133 3 +     21866 TCT
i Sapajus_macrocephalus.k141_796559                      C 0 I 12
s Semnopithecus_entellus.k141_158471                         25846 3 +     27374 TCT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29358 3 +     58920 TCT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15856 3 -     45317 TCT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23514 3 -     42441 TCT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26192 3 -     29113 TCT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29267 3 -     48123 TCT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49496 2 +     77746 -CT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864464 3 -   1910179 TCT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671602 3 +  18376816 TCT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868649 3 +   3870691 TCT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7027 3 -     97271 TCT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125177 3 +    196729 CCT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644047 3 +  69701581 TCT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391455 3 +   1523678 TCT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14594 3 +     22964 TCT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3012 2 +      5583 -CT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191900 3 +    199430 tct
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105870 3 -    539355 tct
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 936 3 +      9917 TCT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7734 3 +     20590 TCT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353706 3 - 186847797 TCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24374 3 -     33621 TCT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20115 2 -     31044 -CT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480426 1 -    610378 --T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21391 3 +     26378 TCT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34067 3 -     78344 TCT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20716 3 +     25722 TCT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29023 3 -     62838 TCT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29067 3 +     46913 TCT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9876 3 -     28527 TCT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30958 3 -     64340 TCT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28996 3 -     63452 TCT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10443 3 +     22490 TCT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3866 3 -      6147 TCT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10779 3 -     13050 TCT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256009 3 -   6242583 TCT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2037 3 +     19340 TCT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173753 3 -    200418 cct
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480736 3 -  10818551 TCT
i Trichechus_manatus.JH594705.1                          I 1 C 0
s Tupaia_chinensis.KB320699.1                              1834398 3 -   4065304 tgt
i Tupaia_chinensis.KB320699.1                            C 0 I 278
s Tupaia_tana.TupTan_flattened_line_394                       8423 3 -     70247 tct
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 276
s Tursiops_truncatus.MRVK01000835.1                       17365999 3 -  33153633 TCT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3921 2 -     21056 TC-
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182115 3 +   5085361 tct
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25528 3 -     30710 TCT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24435 3 -    147434 TCT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76579 3 +   5488506 TCT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105249 3 -    112863 tct
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174440 3 -    224448 TCT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29153 3 -     86975 tct
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1290 3 +      2126 TCT
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Echinops_telfairi.JH980293.1                            62855344 1 - 111700974 I
e Otolemur_garnettii.GL873799.1                             353412 0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        40409 0 -     51505 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Zapus_hudsonius.ZapHud_scaffold_286923                       349 0 -      1899 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116184 0 +    313613 C
e Rhinolophus_sinicus.LVEH01000134.1                       2915004 0 +   3329780 C
e Pteropus_vampyrus.KN525825.1                             3537603 0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5841088 0 -  28871421 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    63109 54 -     65777 I
e Hipposideros_galeritus.HipGal_scaffold_164997               1290 0 -      2730 C
e Hipposideros_armiger.JXIK01000431.1                      1551841 0 -   1711038 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    645236 0 -   1526836 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 44532 0 -     83289 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       5748 66 +     36723 T----------TT--CG-T-G-CACGGAGT--T-ACT--AG---GCATC----T--AGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
s Acinonyx_jubatus.LLWD01001279.1                           813142 66 +   1699592 C----------TT--GG-T-A-CACAGGCT--T-TCT--AG---GACTC----T--AGTA-ACT----GGAG-C--T-T-A--T----------T--TCA-T--GA-----TGTC-----TGATA----CT-C-CAAG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25390 66 +     63021 C----------TT--AT-T-G-CATGGACT--T-ACT--AA---CTC------TCCAGGC-ACT----AGCG-G--G-A-A--T----------T--TTG-A--TG-----TGTT-----TGACC----CT-C-CAAG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415603 66 +  29979442 c----------tt--gg-t-a-cacagact--t-tct--aa---aactc----t--agta-act----ggag-c--t-t-a--t----------t--TCA-C--TC-----TATC-----TGATA----CT-C-CAAG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            215938 66 +    347723 c----------tg--gg-t-a-cacagact--t-tct--aa---aactc----t--acta-atg----ggag-c--t-t-a--t----------t--ccc-C--TG-----TATC-----TGATA----CT-C-CAAG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18361 59 -     61208 ----------------------------------ATT--AA---GAC------CCTAGGA-ACT----AGAA-G--T-C-C--T----------CTTTTCAACTTCAGT-TTGTC-----TGAAG----TT-C-CAAA
i Allactaga_bullata.AllBul_scaffold_20030                I 3 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48385 67 +     53615 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           416 67 +     13857 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         16966 67 -     21945 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18652 67 +     32033 T----------TT--CT-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72499 44 -     84148 ---------------------------------------------TATC----T--AGCT-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Alouatta_belzebul.k141_1011583                         I 12 C 0
s Alouatta_caraya.k141_1109140                               44738 44 -     78289 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Alouatta_caraya.k141_1109140                           I 12 C 0
s Alouatta_discolor.k141_2561099                             44177 44 +     55831 ---------------------------------------------TATC----T--AGCT-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Alouatta_discolor.k141_2561099                         I 12 C 0
s Alouatta_juara.k141_1687208                                42627 44 -     64179 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Alouatta_juara.k141_1687208                            I 12 C 0
s Alouatta_macconnelli.k141_361275                           24261 44 -     24835 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Alouatta_macconnelli.k141_361275                       I 12 C 0
s Alouatta_nigerrima.k141_376068                             41252 44 +     45454 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Alouatta_nigerrima.k141_376068                         I 12 C 0
s Alouatta_palliata.k141_638677                              46901 44 +     70886 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Alouatta_palliata.k141_638677                          I 12 C 0
s Alouatta_puruensis.k141_251022                              9074 44 +     30854 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Alouatta_puruensis.k141_251022                         I 12 C 0
s Alouatta_seniculus.k141_928287                             33208 44 +     42133 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Alouatta_seniculus.k141_928287                         I 12 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585589 64 +   2318259 C----------TT--GG-T-A-C--AGACT--T-TCT--GA---GACTC----T--AGTA-ACT----GGAA-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----CG-C-CAAA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177388 67 -    412891 G----------TT--GG-T-G-C--AGATG--TTTCT--AA---GACTG----T--AGCA-ACA----GGAG-GTGT-T-A--T----------T--TCA-C--TT-----TGTC-----TGACA----TC-C-CAAG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50695 64 -     68529 C----------TT--GG-T-A-C--AGACT--T-TCT--GA---GACTC----T--AGTA-ACT----GGAA-G--T-A-A--T----------T--TCA-C--TG-----TGTT-----TGACA----TG-C-CAAA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1466 43 +     17741 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Aotus_azarae.k141_887050                               I 12 C 0
s Aotus_griseimembra.k141_3192254                             2091 43 -     15923 ---------------------------------------------TAT-----T--AGCA-ACT----GGAA-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Aotus_griseimembra.k141_3192254                        I 12 C 0
s Aotus_nancymaae.KZ198451.1                                672373 43 +   5030052 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Aotus_nancymaae.KZ198451.1                             I 12 C 0
s Aotus_trivirgatus.k141_318729                               2367 43 -     16391 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Aotus_trivirgatus.k141_318729                          I 12 C 0
s Aotus_vociferans.k141_1514463                               1926 43 -     17186 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Aotus_vociferans.k141_1514463                          I 12 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16427 62 -     32367 T----------TC--CA-T-G---TGGACT--T-AGT--AA---GAT--T--CT--AGTA-ACT----GGAG-G--T-T-A--T----------A--TCA-G--T-------GTC-----TGATA----TT-C-CAAG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19810 66 -     45910 C----------TT--AT-A-G-TACTGAGT--T-TGT--CA---GACTC----T--AGTA-ACT----AGAG-A--T-T-A--T----------T--TCA-C--TG-----GGTC-----TGTTA----CT-C-CATG
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5654 67 -     15198 G----------TT--GG-T-A-C--AGACT--TTTCT--GA---GACTC----T--AGCA-ACA----GGAG-GTAT-T-A--T----------T--TCA-T--TT-----TGTC-----TGACA----TC-C-CAAG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               274962 44 +  21539123 ---------------------------------------------TGTG----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Ateles_geoffroyi_b.tarseq_1536                            I 12 C 0
s Ateles_belzebuth.k141_1572163                              11130 44 +     48076 ---------------------------------------------TGTC----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Ateles_belzebuth.k141_1572163                          I 14 C 0
s Ateles_chamek.k141_615173                                   6265 44 -     28759 ---------------------------------------------TGTG----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Ateles_chamek.k141_615173                              I 12 C 0
s Ateles_geoffroyi_a.k141_1283730                              33819 44 +     44353 ---------------------------------------------TGTG----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Ateles_geoffroyi_a.k141_1283730                          I 12 C 0
s Ateles_marginatus.k141_970259                              49190 44 -     71267 ---------------------------------------------TGTC----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Ateles_marginatus.k141_970259                          I 14 C 0
s Ateles_paniscus.k141_866194                                23248 44 -     33135 ---------------------------------------------TGTG----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Ateles_paniscus.k141_866194                            I 12 C 0
s Avahi_laniger.k141_2756659                                  6495 66 +     11645 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TGTTA----CT-C-CAAG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6503 66 -     19611 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TGTTA----CT-C-CAAG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963738 64 -  23207421 T----------TT--GG-T-G-C--AGACT--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-C-CAAG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          238 64 -     25979 T----------TT--GG-T-G-C--AGACT--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-C-CAAG
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86597 64 +    124022 C----------TT--GG-T-A-T--AGACT--T-TCT--GA---GACTC----T--AGTA-ACT----GGAA-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----CG-C-CAAA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22130 65 +    288883 c----------tt--gg-taa-c--agtct--t-tct--ga---gactc----t--agta-act----ggaa-g--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----CG-C-CAAA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356522 65 +  48749331 c----------tt--gg-taa-c--agtct--t-tct--ga---gactc----t--agta-act----ggaa-g--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----NG-C-CAAA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755086 65 +   1948126 t----------tt--gg-taa-c--agtct--t-tct--ga---gactc----t--agta-act----ggaa-g--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----CG-C-CAAA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545228 65 -  45695690 c----------tt--gg-taa-c--agtct--t-tct--ga---gactc----t--agta-act----ggaa-g--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----TG-C-CAAA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530249 65 -   4408762 c----------tt--gg-taa-c--agtct--t-tct--ga---gactc----t--agta-acg----ggaa-g--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----TG-C-CAAA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8139 44 +     28062 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--CG-----TGTC-----TGATA----TT-C-CACA
i Cacajao_ayresi.k141_96119                              I 12 C 0
s Cacajao_calvus.k141_89051                                  43433 44 -     91139 ---------------------------------------------TATC----T--AGCG-ACT----GGAG-G--T-G-A--T----------T--TCA-A--CG-----TGTC-----TGATA----TT-C-CACA
i Cacajao_calvus.k141_89051                              I 12 C 0
s Cacajao_hosomi.k141_81245                                  20959 44 +     95584 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--CG-----TGTC-----TGATA----TT-C-CACA
i Cacajao_hosomi.k141_81245                              I 12 C 0
s Cacajao_melanocephalus.k141_619699                         20872 44 +    119600 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--CG-----TGTC-----TGATA----TT-C-CACA
i Cacajao_melanocephalus.k141_619699                     I 12 C 0
s Callibella_humilis.k141_1233062                            10446 43 +     18648 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--CG-----TGTC-----TGATA----TT-C-CACA
i Callibella_humilis.k141_1233062                        I 12 C 0
s Callimico_goeldii.k141_1609886                              9981 43 -     13885 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Callimico_goeldii.k141_1609886                         I 12 C 0
s Callithrix_geoffroyi.k119_459277                            2051 43 -      8861 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--CG-----TGTC-----TGATA----TT-C-CACA
i Callithrix_geoffroyi.k119_459277                       I 12 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454443 43 + 189096842 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--CG-----TGTC-----TGATA----TT-C-CACA
i Callithrix_jacchus.pat_scaffold_3                      I 12 C 0
s Callithrix_kuhlii.k119_102356                               1966 43 +      8664 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--CG-----TGTC-----TGATA----TT-C-CACA
i Callithrix_kuhlii.k119_102356                          I 12 C 0
s Camelus_bactrianus.KN276810.1                            7631249 66 +  17673402 C----------CT--GT-T-G-CACAGACT--T-TCT--AA---GACTC----T--AGTA-GCT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-T-TAAG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665535 66 +   7040546 C----------CT--GT-T-G-CACAGACT--T-TCT--AA---GACTC----T--AGTA-GCT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-T-TAAG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209195 66 +   1652518 C----------CT--GT-T-G-CACAGACT--T-TCT--AA---GACTC----T--AGTA-GCT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-T-TAAG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505621 66 +  60362399 c----------gt--gg-t-g-cacagact--t-tct--aa---aactc----t--agta-act----ggag-c--t-t-a--t----------t--TCA-C--TA-----TGTC-----TGATA----CT-C-CAAG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9257 66 -     23171 C----------GT--GG-T-G-CACAGACT--T-TCT--AA---AACTC----T--AGTA-ACT----GGAG-C--T-T-A--T----------T--TCA-C--TA-----TGTC-----TGATA----CT-C-CAAG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222600 66 +   9314153 C----------GT--GG-T-G-CACAGACT--T-TCT--AA---AACTC----T--AGTA-ACT----GGAG-C--T-T-A--T----------T--TCA-C--TA-----TGTC-----TGATA----CT-C-CAAG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615735 66 +  59632846 c----------gt--gg-t-g-cacagact--t-tct--aa---aactc----t--agta-act----ggag-c--t-t-a--t----------t--TCA-C--TA-----TGTC-----TGATA----CT-C-CAAG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107316 66 -  63665305 C----------GT--GG-T-G-CACAGACT--T-TCT--AA---AACTC----T--AGTA-ACT----GGAG-C--T-T-A--T----------T--TCA-C--TA-----TGTC-----TGATA----CT-C-CAAG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409318 64 -  46296322 C----------TT--GG-T-A-C--AGACT--T-TCT--GA---GACTC----T--AGTA-ACT----GGAA-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----CG-C-CAAA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591592 64 +  44709034 C----------TT--GG-T-A-C--AGACT--T-TCT--GA---GACTC----T--AGTA-ACT----GGAA-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----CG-C-CAAA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1797 46 -      1880 ---------------------------------------AA---GAC--T-T-T--AGTA-ACT----GATA-G--T-T-A--T----------T--TTA-A--TA-----TAC------TGATG----TT-C-TAAT
i Capromys_pilorides.CapPil_scaffold_652123              I 15 C 0
s Carlito_syrichta.NW_007259797.1                           270706 64 +    496798 C----------TT--GC-T-T-CATTGACT--T-ACT--AA---GGCTC----T--AGTA-AAT----GGAG-G--T-T-A--T----------T--TCA-A--T-------GCC-----TGATA----CA-T-CAAG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                510 67 +      9923 G----------CC--GG-T-G-C--AGGCT--TTTCT--GA---CGGTC----T--AGCA-GTA----GGAG-GTGT-T-A--T----------T--TCA-C--TT-----TGTC-----TGACA----TC-C-CAAG
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27911 63 -     39886 C----------TT--GT-T-A-CATAGACT--T-ACT--AG-GACTC------T--AGGA-ACC-------A-G--T-T-A--T----------T--CCA-A--TG-----AATC-----TCATA----TT-T-CAAG
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79791 65 -    217609 C----------TT--GG-T-G-CATAGACT--T-TCT--AA---GACTC----T--GGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-A--CA-----TGTT-----TGATA-----T-C-CAAG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996658 64 +  23392119 C----------TT--GT-T-G-CATGGATT--C-ACT--AA---GAC------T--AGTG-ACT----GGAG-G--T-T-A--T----------T--TTA-A--TG-----TATT-----AGATA----TT-C-TTGG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000099 64 +  23407841 C----------TT--GT-T-G-CATGGATT--C-ACT--AA---GAC------T--AGTG-ACT----GGAG-G--T-T-A--T----------T--TTA-A--TG-----TATT-----AGATA----TT-C-TTGG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63180 64 -     66877 C----------TT--GT-T-G-CATGGATT--C-ACT--AA---GAC------T--AGTG-ACT----GGAG-G--T-T-A--T----------T--TTA-A--TG-----TATT-----AGATA----TT-C-TTGG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5364 43 -     12580 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Cebuella_niveiventris.k141_592277                      I 12 C 0
s Cebuella_pygmaea.k141_145798                               43422 43 +     53515 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Cebuella_pygmaea.k141_145798                           I 12 C 0
s Cebus_albifrons.Contig27                                  371350 43 -  26074798 ---------------------------------------------TGT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Cebus_albifrons.Contig27                               I 12 C 0
s Cebus_olivaceus.k141_1404781                                8239 43 -     34880 ---------------------------------------------TGT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Cebus_olivaceus.k141_1404781                           I 12 C 0
s Cebus_unicolor.k141_1654760                                67334 43 -     89041 ---------------------------------------------TGT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Cebus_unicolor.k141_1654760                            I 12 C 0
s Cephalopachus_bancanus.k141_1689090                         2668 46 -      5494 C----------TT--GC-T-T-CATTGACT--T-AAT--ACATTGAC-A----T--AATA-CAC----CAAG-G--T-C-A--T----------T-------------------------------------------
i Cephalopachus_bancanus.k141_1689090                    C 0 I 16
s Ceratotherium_simum.JH767749.1                          15492426 64 -  27778364 C----------TT--GG-T-G-TACAGATT--T-TCG--AA---GACTC----T--AGTA-ACT----GGAG-G--T-T-A--T----------T--TCA-C--TG-----TGTC-----TGA------GT-C-CAAG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19259 64 +     27315 C----------TT--GG-T-G-TACAGATT--T-TCG--AA---GACTC----T--AGTA-ACT----GGAG-G--T-T-A--T----------T--TCA-C--TG-----TGTC-----TGA------GT-C-CAAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141541 67 -   4669795 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45284 67 +     47900 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            388 67 -     14410 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45097 67 -    148725 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27300 66 -     40656 -----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7263 67 +     20796 T----------TT--CG-T-G-CATGAATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-C--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12381 67 -     17524 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--C-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28108 67 -     34525 T----------TT--CA-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11884 67 -     25376 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364478 67 -  39242232 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270198 67 +  21565898 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32566 67 -     45857 T----------TT--TG-T-A-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27467 67 -     32606 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3629 67 +      8499 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26025 67 +     70610 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         22993 67 +     36323 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--C-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13025  1 -     19938 C-----------------------------------------------------------------------------------------------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 18
s Cheirogaleus_major.k141_666340                             30869 65 -     33796 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GA-TC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TATTA----CT-C-CAAG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5386 65 -     15404 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GA-TC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TATTA----CT-C-CAAG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9239 44 -     32913 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACG
i Cheracebus_lucifer.k141_2312002                        I 12 C 0
s Cheracebus_lugens.k141_1179667                             19652 44 -     40346 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACG
i Cheracebus_lugens.k141_1179667                         I 12 C 0
s Cheracebus_regulus.k141_471822                             19907 44 +    216457 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACG
i Cheracebus_regulus.k141_471822                         I 12 C 0
s Cheracebus_torquatus.k141_890198                           19700 44 +     39636 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACG
i Cheracebus_torquatus.k141_890198                       I 12 C 0
s Chinchilla_lanigera.JH722012.1                           1239012 66 -   2543920 C----------CT--GT-T-G-CATGGACT--T-ACT--AA---GAC--T--CT--AGTA-ACT----GGaa-g--t-t-a--t----------t--tta-a--tg-----tatt-----tgata----TT-C-TAAG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4296 43 +      5346 ---------------------------------------------CAT-----T--AGCA-ACT----GGAG-G--A-T-A--T----------T--TCA-A--TG-----TGCC-----TGATA----TT-C-CACA
i Chiropotes_albinasus.k141_1946120                      I 12 C 0
s Chiropotes_israelita.k141_313004                           42770 44 -    112038 ---------------------------------------------TATC----T--AGCG-ACC----GGAG-G--T-G-A--T----------T--TCA-A--CG-----TGTC-----TGATA----TT-C-CACA
i Chiropotes_israelita.k141_313004                       I 12 C 0
s Chiropotes_sagulatus.k141_1113111                           8341 44 +     34062 ---------------------------------------------TATC----T--AGCG-ACT----GGAG-G--T-G-A--T----------T--TCA-A--CG-----TGTC-----TGATA----TT-C-CACA
i Chiropotes_sagulatus.k141_1113111                      I 12 C 0
s Chlorocebus_aethiops.ctg25                                343887 67 +  18827391 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10435 67 -     44032 T----------TT--TG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305212 67 - 135778131 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15061 66 +     15858 C----------TT---G-T-TACATTGACT--A-ACT--AC---GACTC----G--AGTA-ACT----GGAA-G--T-T-A--T----------T--TTT-C--TA-----GGCC-----TGATA----CT-C-CAAG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606636 66 -    839153 C----------TT---G-T-TACATTGACT--A-ACT--AC---GACTC----G--AGTA-ACT----GGAA-G--T-T-A--T----------T--TTT-C--TA-----GGCC-----TGATA----CT-C-CAAG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_1700486               638 65 +       798 C----------TT---G-T-G-CACTGATT--T-ACT--AA---AATTT----T--AGTA-CCT----GGAG-A--T-T-A--T----------T--TCA-C--TG-----TGTT-----TGTTA----CT-C-CAAG
i Chrysochloris_asiatica.ChrAsi_scaffold_1700486         C 0 I 26
s Colobus_angolensis.KN981557.1                             409617 67 -   2368649 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----GGACA----CT-C-CACA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379498 67 - 200372422 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----GGACA----CT-C-CACA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3055 67 -     84244 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----GGACA----CT-G-CACA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807491 39 +  53390261 -----------AT--AG-T-G-TATAGATA--T-TCA--AA---GACTC----T--AATA-AAT----GGAG-A--T-------------------------------------------------------------
i Condylura_cristata.JH655891.1                          C 0 I 22
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3016 67 -      8242 C-----------TT-GA-T-A-CACGGACT--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-T-A--T----------T--TCA-C--TG-----TATC-----TGATA----CT-CCCAAG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44532 65 -     83289 C----------TT--GT-T-T-CACGAACT--T-ACC--AA---GAC------TTGAGGC-ACT-----GTG-G--T-A-A--T----------G--TTG-A--TG-----TGTT-----TGATG----CT-C-CGAG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115099 67 - 224834208 T----------GT--GT-C-T-TATGGTCT--T-AGA--AA---GAC------TTGGGGC-ACT----AGTG-G--TTA-A--G----------T--TTG-A--TG-----TTTC-----TGATA----CT-C-CAAG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9674 14 +     12657 C----------CT--GG-T-G-CATAGAC-------------------------------------------------------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 29
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4594 66 +     87169 c----------tt--gg-t-a-cacagact--t-cct--aa---gactc----t--agta-act----ggag-c--t-t-a--t----------t--TCA-T--GG-----TGTC-----TGATA----CT-C-CAAG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645236 48 -   1526836 ----------------------------------TCT--AA---GAC------C--AGTA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TATC-----TGAGA----TT-C-CATA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18575 63 +     50838 C----------TT--AT-T-G-CATGGACT--T-AC----A---GAC--T--CT--AGTA-ACT----GAAA-G--T-T-A--T----------T--TTA-A--TG-----TAC------CAATG----TT-C-TAAT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4592 47 +     36344 -----------------------------------CT--AA---GAC------T--AGTA-ACT----GGAA-G--T-T-A--T----------T--TTA-A--TG-----TATT-----TGATA----TT-C-TAAG
i Cuniculus_paca.CunPac_flattened_line_7025              I 13 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28351 64 +     75252 C----------TT--GT-T-G-CATGGACT--C-ACT--AA---GAC------T--AGTA-AAT----GGAA-G--T-T-A--T----------T--TTA-A--TG-----TATT-----TGATA----TT-C-TAAG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110377  1 -   2246927 C-----------------------------------------------------------------------------------------------------------------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 18
s Daubentonia_madagascariensis.ctg71                        292804 66 +  12879189 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTA-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TGTTA----CT-C-CAAG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632146 64 -  35494412 c----------tT--GG-T-G-C--AGACT--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-C-CAAG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11865425 67 -  20541912 G----------TC--GG-T-A-C--AGATT--CTTCT--AA---GGCTC----T--GGCA-ACA----GGAG-GTGT-T-A--C----------T--TCA-C--TT-----CGTC-----TGATA----CC-C-CAAG
i Desmodus_rotundus.KZ672289.1                           I 709 I 43
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664708 66 -   1390856 C----------TT--GG-T-G-CACAGATT--T-TCG--AA---GACTC----T--AGTA-ACT----GGAG-G--T-T-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-C-CAAG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139503 64 -    198055 C----------TT--GG-T-G-TACAGATT--T-TCG--AA---GACTC----T--AGTA-ACT----GGAG-G--T-T-A--T----------T--TCA-C--TG-----TGTC-----TGA------CT-C-CAAG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99098 68 -    115145 C----------TT--GC-T-G-CATGGACT--T-ACTATAA---GAC--T--CT--AGTA-ACT----GGAA-G--T-T-A--T----------T--TTA-A--TG-----TATT-----TGATA----TT-C-TAAA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950738 62 -  37912305 C----------TT--GC-T-G-TGTGGCCT--C-A----AA---TTC------T--AGGC-ACT----GGGG-A--T-T-A--T----------T--TTG-A--TG-----CATC-----TCACA----TA-C-CAAG
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5678 37 -     10735 C----------TT--GC-T-G-TGTGGCCT--C-A----GA---TTC------T--AGGT-ACT----GGGG-A--T-T-----------------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 10
s Eidolon_helvum.AWHC01266696.1                               6489 58 +     19438 -----------------------GTAGACT--T-TCT--AA---GATTC----C--TATA-ACT----GGAG-G--T-T-A--T----------T--TCA-C--TG-----GGTC-----TGATA----TT-C-CAAG
i Eidolon_helvum.AWHC01266696.1                          I 6 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       239958 64 -    607251 C----------TT--GG-T-A-C--GGACT--T-TCT--GA---GACTC----T--AGTA-ACT----GGAA-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----CA-C-CAAA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9109032 41 -  10337057 --------------------------------------------------------aaga-cct----gaag-c--c-t-ttct----------c--taa-c--ta-----tgat-----cattt----ag-c-aaag
i Elephantulus_edwardii.JH947257.1                       I 58 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31248 66 +    110024 T----------GT--TG-T-T-TATGAACT--T-AGT--AA---AAC------TTAAGGC-ACT----AGTg-g--t-a-a--t----------t--tta-a--tg-----tgtt-----tgtta----CT-C-CAAG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13219 66 +     18970 T----------GT--TG-T-T-TATGGACT--T-AGT--AA---GAC------TTGAGGC-ACT----AGTG-G--T-A-A--T----------T--TTG-A--TG-----TGTT-----TGTTA----CT-C-CAAG
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916341 76 +  41312741 C----------TT--GG-T-A-GACAGACT--T-TCT--AA---AACTC----T--AGTA-ACTCTCTAAAACT--C-T-A--T----------T--CCA-C--TG-----TATCTGATCTGATA----CT-C-CAAG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579126 66 +  14770903 G----------TT--GG-T-G-CAAAGACT--TTTCT--AA---GTGTC----T--GGTA-ACT----GCAG-G--T-T-A--T----------T--TCA-C--TT-----TGTT-----TGATA----G--C-CAAG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041588 64 -   4378816 C----------TC--AG-T-G-TACAGACT--T-TCT--AA---GATGC----T--AGTA-ACT----GGAG-G--T-T-A--T----------T--TCA-C--TG-------TC-----TGATA----CT-C-CAAG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375526 64 +  39960074 C----------TC--AG-T-G-CACAGACT--T-TCT--AA---GATGC----T--AGTA-ACT----GGAG-G--T-T-A--T----------T--TCA-C--TG-------TC-----TGATA----CT-C-CAAG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             907 64 -      1194 C----------TC--AG-T-G-CACAGACT--T-TCT--AA---GATGC----T--AGTA-ACT----GGAG-G--T-T-A--T----------T--TCA-C--TG-------TC-----TGATA----CT-C-CAAG
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666293 40 +   7059049 C----------TT--GA-T-A-CATAGACT--T-TGT--AA---GACTC----T--GGTA-ACT----AGAG-G--T-------------------------------------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 24
s Erythrocebus_patas.Contig38                               263425 67 +  21539334 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTA-----AGATA----CT-C-CACA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71355 64 -    133382 C----------TT--GG-T-G-C--AGACT--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-C-CAAG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202              899 64 -      1170 C----------TT--GG-T-G-C--AGACT--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-C-CAAG
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               15017 66 -     24895 C----------TT--AT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TGTTA----CT-C-CAAG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42727 66 -     70999 C----------TT--AT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TGTTA----CT-C-CAAG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86697 66 +    112731 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTT-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TGTTA----CT-C-CAAG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43260 66 +     68309 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GCCTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TATTA----CT-C-CAAG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53584 66 -     65740 C----------TT--AT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TGTTA----CT-C-CAAG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24216 66 -     75513 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GCCTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TATTA----CT-C-CAAG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48411 66 -     97555 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GCCTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TGTTA----GT-C-CAAG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5135 66 +     30972 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TGTTA----CT-C-CAAG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42855 66 -     52037 C----------TT--AT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TGTTA----CT-C-CAAG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59258 66 -    111500 C----------TT--AT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TGTTA----CT-C-CAAG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247051 66 - 206538554 C----------TT--GG-T-A-CACAGGCT--T-TCT--AG---GACTC----T--AGTA-ACT----GGAG-C--T-T-A--T----------T--TCA-C--GA-----TGTC-----TGATA----CT-C-CAAG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116837 66 - 205367284 C----------TT--GG-T-A-CACAGGCT--T-TCT--AG---GACTC----T--AGTA-ACT----GGAG-C--T-T-A--T----------T--TCA-C--GA-----TGTC-----TGATA----CT-C-CAAG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 27934 66 -     30238 C----------TT--GG-T-A-TACAGGCT--T-TCT--AG---GACTC----T--AGTA-ACT----GGAG-C--T-T-A--T----------T--TCA-T--GA-----TGTC-----TGATA----CT-C-CAAG
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916655 65 -   3816255 t----------TT--GT-T-G-CATGGAC---T-ACT--AA---CAC--T--CT--AGTA-ACT----GGAa-g--t-t-a--t----------t--tta-c--tg-----tatt-----tgatA----TT-C-CAAG
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     125260 66 -    137831 C----------TT--GT-A-G-CACTGAGT--T-TGT--GA---GATTC----C--AGTA-ACT----AGAG-A--T-T-A--T----------G--TCA-C--TG-----GGTC-----TGTTA----CT-C-TATG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8805 66 +     22493 C----------TT--GT-A-G-CACTGAGT--T-TGT--GA---GATTC----C--AGTA-ACT----AGAG-A--T-T-A--T----------G--TCA-C--TG-----GGTC-----TGTTA----CT-C-TATG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20876 66 -     32986 C----------TT--GT-A-G-CACTGAGT--T-TGT--GA---GATTC----C--AGTA-ACT----AGAG-A--T-T-A--T----------T--TCA-C--TC-----GGTT-----TGTTA----CT-C-CATG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1396 66 -     28519 C----------TT--TT-T-G-CATTGACT--T-ACT--AA---GAATC----T--AGTA-AAT----GGAG-A--T-T-A--T----------T--TCA-A--CA-----TGTC-----TGACA----CT-C-CAAG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91661 64 -     95226 C----------TT--GG-T-A-C--AGACT--T-TCT--GA---GACTC----T--AATA-ACT----GGAA-A--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----CG-C-TAAA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34724 36 -     36801 T----------TT--GT-T-G-CATGGACT--T-ACT--AA---GAC------T--AGTA-ACT----GGTG------------------------------------------------------------------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 29
s Gorilla_beringei.k141_3358147                               6048 66 -      8343 T----------TT--CA-T-G-CATGGAGT--T-ACT--AG---GCATC----T--AGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255063 66 - 186649187 t----------tt--cg-t-g-cGTGGAGT--T-ACT--AG---GCATC----T--AGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2220 36 -     78134 T----------TT--GT-T-G-CATGGACT--T-ACT--AA---GAC------T--AGTA-ACT----GGTA------------------------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 29
s Hapalemur_alaotrensis.k141_330369                          14942 66 -     40692 C----------CT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TGTTA----CT-C-CAAG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36344 66 +     49394 C----------CT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TGTTA----CT-C-CAAG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61212 66 -     66874 C----------CT--GT-A-G-CATTGACT--T-AGT--AA---GGCTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TGTTC----CT-C-TAAG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10086 66 -     42923 C----------CT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TGTTA----CT-C-CAAG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17086 39 -     53142 C----------CT--GT-A-G-CATTGACT--T-AGT--AA---GGCTC----T--AGTG-ACT----GGAG-A----------------------------------------------------------------
i Hapalemur_occidentalis.k141_578367                     C 0 I 26
s Helogale_parvula.HelPar_flattened_line_2585                31027 66 -    327341 C----------TT--GG-T-A-CACAGACT--T-CCT--AA---GACTC----T--AGTA-ACT----GGAG-C--T-T-A--T----------T--TCA-T--GG-----TGTT-----TGATA----CT-C-AAAG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9336 64 +     48891 C----------TT--GG-T-A-T--AGACT--T-TCT--GA---GACTC----T--AGTA-ACT----GGAA-G--T-A-A--T----------T--TCA-C--CG-----TGTC-----TGACA----CG-C-CAAA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932630 66 -  22651954 T----------TT--GT-T-G-CATGGACT--T-ATT--AA---GAC--T--CT--AGTC-ACT----GGaa-g--t-t-a--t----------t--tta-a--tg-----tatt-----tgatA----TT-C-CAAG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                1288 63 +      4291 C----------TC---G-T-A-CACTGACT--T-ATT--GA---GACGT----T--AGTA-CCT----GGAG-G--T-T-A--T----------T--CCA-C--T-------GTC-----TGACG----CC-T-CAAG
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7859 64 -     36432 C----------TT--GG-T-G-C--AGACT--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-C-CAAG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551841 63 -   1711038 ---------------gg-t-a-CATAGACT--T-TCT--TA---GGCTG----T--AGTA-ACT----AAAG-G--G-T-A--T----------T--TTA-C--TA-----TGTC-----TGATA----CT-C-CAAG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1290 54 -      2730 ---------------GG-T-A-CATAGACT--T-TCT--TA---GGCTG----T--AGTA-ACT----AAAG-G--G-T-A--T----------T--TCA-C--TG-----TGTC-----TGA---------------
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143072 66 -    630532 T----------TT--CG-T-G-CATAGATT--T-ACC--AG---GCATC----T--AGCA-ATT----GGAG-G--T-T-A--T----------A--TCC-A--TG-----TGTC-----AGATA----CT-C-CACA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70191 66 +     83186 g----------TT--GG-T-A-AACAGATT--T-CTT--AA---GACTC----T--AGTA-ACT----GAAG-C--T-T-A--T----------T--TCA-T--GG-----TGTC-----TGATA----CT-C-CAAG
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72095 64 +    143317 C----------TT--GT-T-G-CATGGACT--C-ACT--AA---GAC------T--AATA-ACT----AGAG-G--T-T-A--T----------T--TTA-C--TG-----TATT-----AGATA----TT-C-TAGG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6106 66 +     12352 T----------TT--CG-T-G-CATAGATT--T-ACT--AG---GCATC----T--AGCA-ATT----GGAG-G--T-T-A--T----------A--TCC-A--TG-----TGTC-----AGATA----CT-C-CACA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13290 66 +     55766 T----------TT--CG-T-G-CATAGATT--T-ACT--AG---GCATC----T--AGCA-ATT----GGAG-G--T-T-A--T----------A--TCC-A--TG-----TGTC-----AGATA----CT-C-CACA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052890 66 + 191637585 T----------TT--CG-T-G-CATAGATT--T-ACT--AG---GCATC----T--AGCA-ATT----GGAG-G--T-T-A--T----------A--TCC-A--TG-----TGTC-----AGATA----CT-C-CACA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801768 66 +  11177569 T----------TT--CG-T-G-CATAGATT--T-ACT--AG---GCATC----T--AGCA-ATT----GGAG-G--T-T-A--T----------A--TCC-A--TG-----TGTC-----AGATA----CT-C-CACA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4735 67 -    135385 C----------CT--GT-T-G-TATGGACT--T-ACT--AA---GAC--T--CT--AGTA-ACT----AGAA-G--T-T-A--T----------T--TTA-A--TA-----CATT-----TGATA----TT-CACAAG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387073 64 +   7955117 -----------TC--GT-T-G-CATGGACT--T-ACT--AA---GAA--T-T-T--AGTA-GCT----GGAG-G--T-T-A--T----------T--TCA-G--T------TATC-----CAATA----TT-C-CAAG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2639 66 +     11955 A----------TT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----AGAG-A--T-T-A--T----------T--TCA-A--TG-----GTTC-----TGTTA----CT-C-CAAG
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10247 64 -     16823 C----------TT--GG-T-G-C--AGACT--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-C-CAAG
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240114 65 +   9596543 ----------------------------------ATT--AA---GAC------CCTAGGA-ACT----AAAa-g--t-c-t--ttggtttattttttttcattttc-----tgtc-----tgaGG----TT-C-CAAA
i Jaculus_jaculus.JH725527.1                             I 13 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72090 64 -     97402 C----------TT--GG-T-G-C--CGACT--T-TCT--AA---GACTG----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-T--TG-----TGTC-----TGATA----CT-C-CAAG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43515 44 +    110728 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----TGATA----TT-C-CACA
i Lagothrix_lagothricha.k141_246028                      I 12 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    32384 54 -     49555 ---------------------------act--tttct--aa---gcctc----c--gcta-act----gcag-g--t-t-a--t----------t--cca-c--tt-----ggtt-----tgaCA----G--C-CAAG
i Lasiurus_borealis.LasBor_scaffold_26245                I 5 I 36
s Lemur_catta.scaffold_24                                 14759735 66 +  30322482 C----------CT--GC-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TGTTA----CT-C-TAAG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4430 43 -     13097 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-A--A-T-A--T----------T--TCA-A--CA-----TGCC-----TGATA----TT-C-CACA
i Leontocebus_fuscicollis.k141_2994775                   I 12 C 0
s Leontocebus_illigeri.k141_2951200                           4184 43 +      5940 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-A--A-T-A--T----------T--TCA-A--CA-----TGCC-----TGATA----TT-C-CACA
i Leontocebus_illigeri.k141_2951200                      I 12 C 0
s Leontocebus_nigricollis.k141_3905062                        4014 43 -      5717 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-A--A-T-A--T----------T--TCA-A--CA-----TGCC-----TGATA----TT-C-CACA
i Leontocebus_nigricollis.k141_3905062                   I 12 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10386 43 -     11567 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGGTA----TT-C-CACG
i Leontopithecus_chrysomelas.k141_1327670                I 12 C 0
s Leontopithecus_rosalia.k141_349454                         11767 43 -     12945 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGGTA----TT-C-CACG
i Leontopithecus_rosalia.k141_349454                     I 12 C 0
s Lepilemur_ankaranensis.k141_567626                          9245 66 +     29618 C----------CT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GCAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TGTTA----CT-C-CAAG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9241 66 +     31569 C----------CT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GCAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TGTTA----CT-C-CAAG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9251 66 +     24756 C----------CT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GCAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TGTTA----CT-C-CAAG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9251 66 +     16388 C----------CT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GCAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TGTTA----CT-C-CAAG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813730 64 -   3914936 C----------TT--GG-T-A-CACAGACT--T-TCT--AA---AAC------T--AGTA-ACT----GGAG-C--T-T-A--T----------T--TCA-C--TG-----TATC-----TGATA----CT-C-CAAG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18098 70 +     24238 G----------TT--AT-T-G-CACTGATT--T-ACA--AA---GACTGTATGT--AGTA-ACC----TGAG-G--T-T-A--T----------T--TCA-T--TG-----TGTC-----TGATA----CT-C-CAAG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341436 60 +    662738 C----------TT--GG-T-G-C--AGACT--T-TCT--AA---GAC------T--AGTA-AC------GAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-C-CATG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334426 67 -   1826925 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10826 66 +     19643 C----------TT--CT-A-G-CTCTGAGT--T-TGT--GA---GACTC----C--ACTA-ACT----AGAG-A--T-T-A--T----------T--TCA-C--CA-----GGTC-----TGTTA----CT-C-CCTG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5044489 66 -   6120653 C----------TT--CT-A-G-CTCTGAGT--T-TGT--GA---GACTC----C--ACTA-ACT----AGAG-A--T-T-A--T----------T--TCA-C--CA-----GGTC-----TGTTA----CT-C-CCTA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39081942 44 +  43346337 ---------------------------------------------ACTT----C--AGTA-TCT----GCAG-A--T-T-A--T----------T--TCA-T--TG-----TGTC-----TGATA----Ct-t-caag
i Loxodonta_africana.GL010049.1                          I 15 C 0
s Lycaon_pictus.CM007581.1                                41614890 66 +  59628241 c----------gt--gg-t-g-cacagact--t-tct--aa---aactc----t--agta-act----ggag-c--t-t-a--t----------t--TCA-C--TA-----TGTC-----TGATA----CT-C-CAAG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45821 67 -     61512 T----------TT--CG-T-G-CATGGATT--TTGCT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373483 67 -  60120075 T----------TT--CG-T-G-CATGGATT--TTGCT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25745 67 +     30207 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             583 67 -      5035 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25698 67 +     30527 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36874 67 -     50087 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46618 67 +     51645 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415821 67 - 187317192 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400051 67 +  25927173 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49223 67 -     62418 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1760 67 +     14901 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45695 67 +     59329 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271603 67 +    668171 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   247 67 -      5049 T----------TT--CC-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3401 67 +     17132 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223459 58 -    270270 -----------------------GTAGACT--T-TCT--AA---GATTC----C--TGTA-ACT----GGAG-G--T-T-A--T----------T--TCA-C--TG-----GGTC-----TGATA----CT-C-CAAG
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 2 C 0
s Mandrillus_leucophaeus.scaffold280                        322891 67 +  24302211 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357722 67 -    752769 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673778 66 -    737560 c----------ct--gg-c-a-cacagact--t-ttt--ga---gactc----t--agta-act----ggag-g--t-t-a--g----------c--tca-c--tG-----TGTC-----TGATA----CT-A-CAAG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221074 66 +    317179 c----------ct--gg-c-a-cacagact--t-tgt--ga---gactc----t--agta--ct----ggag-g--t-t-a-ag----------c--tca-c--tG-----TGTC-----TGATA----CT-C-CAAG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501293 63 +  40650429 ------------C--TT-T-G-CATGGACT--T-ACT--AA---GAA--T-T-T--AGTA-GCT----GGAG-G--T-T-A--T----------T--TCA-G--T------TATC-----CAATA----TT-C-CAAG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150623 66 +    207569 C-----------TT-GG-T-A-CGTAGACT--T-TCT--GA---GACTC----T--AGTA-ATT----GGAG-A--T-T-A--T----------T--TCA-A--TC-----TGTC-----TGATG----CT-C-TCCG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26499 64 -     74585 C----------TT--GG-T-A-TACAGACT--T-TCT--AA---AAC------T--AGTA-AGT----GGAG-C--T-T-A--T----------T--CCA-C--TG-----TATC-----TGATA----CT-C-CAAG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50386 64 -    140813 C----------TT--GT-T-T-CATGGACT--C--CC--AA---GTC------TCCAGGC-ACT----AGTG-A--T-A-A--T----------T--TTG-A--TG-----TGT------TGACA----AT-C-CAAG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429485 65 +  29670104 T----------GT--GT-T-T-TAC-GTCT--T-AGA--AA---GAC------TTGAGGC-ACT----AGTG-G--T-A-A--T----------T--TTG-A--TG-----TGTT-----TGATA----CT-C-CAAG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87718 62 +     93471 C----------TT--GG-T-G-C--AG--T--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-C-CAAG
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10553 43 +     17804 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--CG-----TGTC-----TGATA----TT-C-CACA
i Mico_argentatus.k141_582562                            I 12 C 0
s Mico_humeralifer.k141_1180625                              11053 43 -     12984 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--CG-----TGTC-----TGATA----TT-C-CACA
i Mico_humeralifer.k141_1180625                          I 12 C 0
s Mico_schneideri.k141_1877700                                     19369 43 -     26561 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--CG-----TGTC-----TGATA----TT-A-CACA
i Mico_schneideri.k141_1877700                                 I 12 C 0
s Microcebus_murinus.CM007674.1                           74984852 65 +  93316391 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GA-TC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----GTTC-----TGTTA----CT-c-caag
i Microcebus_murinus.CM007674.1                          C 0 I 230
s Microgale_talazaci.MicTal_scaffold_6613                    46413 64 +    145209 -----------CT---G-C-A-TACAGACT--T-TCT--AA---GATGT----T--AGTA-GCT----GGAG-A--T-T-A--T----------T--TCA-C--TA-----TGTC-----TTATG----CT-T-CAAC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185310 67 +    200668 g----------tt--gg-t-g-c--agact--ttgct--aa---gactc----t--agca-aca----ggag-gTGT-T-A--T----------T--TCA-C--TT-----TGTC-----TGACA----TC-C-CAAG
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962688 66 +  27267610 T----------GT--TG-T-T-TATGGACT--T-CAT--AA---GAC------TTGCAGC-ACT----AGTG-G--T-A-A--T----------T--TTG-A--TG-----TGTC-----TGATA----CT-C-CAAG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363473 67 -   8254450 G----------TT--GG-T-G-CATAGACT--TTTCT--AA---GACTC----T--AGTA-AAT----GGAG-G--T-T-A--T----------T--TCA-C--TT-----TGTC-----TGATA----T-TC-CAAG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42380 67 -     48117 G----------TT--GG-T-G-CATAGACT--TTTCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-T-A--T----------T--TCA-C--TT-----TGTC-----TGATA----T-TC-CAAG
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22925 67 -     27822 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-G--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8741 64 +     27589 C----------TT--GG-T-A-CACAGACT--T-TCT--AA---AAC------T--AGTA-ACT----GGAG-C--T-T-A--T----------T--TCA-C--TG-----TATC-----TGATA----CT-C-CAGG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52649 65 -     62432 C----------TA--GT-A-G-CATTGACT--T-AGT--AA---GA-TC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TGTTA----CT-C-CAAG
i Mirza_zaza.k141_766280                                 C 0 I 220
s Monodon_monoceros.MonMon_M_scaffold_103                   359821 64 +    437263 c----------tT--GG-T-G-C--AGACT--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-C-CAAG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179538 67 +    366855 g----------tt--gg-t-g-cacagact--tttct--aa---gac------t--agta-aca----ggag-ttag-t-a--c----------c--tcc-c--TT-----TGTC-----TGATA----CC-C-CAAG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25783 64 -     82753 C----------TT--GG-T-A-C--AGACT--T-TCT--GA---GACTC----T--AGTA-ACT----GGAA-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----CA-C-CAAA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18778 66 -     63510 C----------TT--GG-T-A-CACAGACT--T-CCT--AA---GACTC----T--AGTA-ACT----GGAG-C--T-T-A--T----------T--TCA-C--GG-----TGTT-----TGATA----CT-C-AAAG
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39439 66 +     47283 G----------TT--GG-T-G-CAAAGACT--TTTCT--AA---GACTC----T--GGTA-ACT----GCAG-G--T-T-A--T----------T--TCA-C--TT-----TGTT-----TGACA----G--C-CAAG
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593408 66 + 120012414 C----------TT--GT-T-T-CATGGACT--T-CCT--AA---GTT------TCCAGGT-ACT----AGTG-G--T-A-A--T----------T--TTG-A--TG-----TGTC-----AGATA----CT-CC-AAG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687794 66 + 129401213 C----------TT--GT-T-T-CATGGACT--T-CCT--AA---GTC------TCCAGGT-ACT----AGTG-G--T-A-A--T----------T--TTG-A--TG-----TGTT-----GGATA----CT-CC-AAG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497087 66 + 130317789 C----------TT--GT-T-T-CATGGACT--T-CCT--AA---GTC------TCCAGGT-ACT----AGTG-G--T-A-A--T----------T--TTG-T--TG-----TGTT-----GGATA----CT-CC-AAG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83778 36 -     86153 T----------TT--GT-A-A-CATAGACT--T-ACT--AA---GAC------T--AGTA-ACT----GATA------------------------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 27
s Mustela_putorius.JH418006.1                             14355373 66 +  14710649 c----------tt--gg-t-a-cacagtct--t-tct--aa---aactc----t--agta-act----ggag-c--t-t-a--t----------t--CCA-C--TG-----TATC-----TGATA----CT-C-CAAG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63377 46 +     67721 ---------------------------------------AA---GAC--T--CT--AGTA-ACT----GAAA-G--C-T-A--T----------T--TTA-A--TA-----TAC------TAATG----TT-C-TAAT
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 15 C 0
s Myotis_brandtii.KE162005.1                               9793727 66 +  10118263 C----------TT--GG-T-G-CAAAGACT--TTTCT--AA---GACTC----T--GGTA-ACT----GCAG-G--T-T-A--T----------T--TCA-C--TT-----TGTT-----TGATA----G--C-CAAG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387858 66 +   6019432 G----------TT--AG-T-G-CAAAGACT--TTTCT--AA---GACTC----T--GGTA-ACT----GCAG-G--T-T-A--C----------T--TCA-C--TT-----TGTT-----TGATA----G--C-CAAG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383686 66 +   4330536 G----------TT--GG-T-G-CAAAGACT--TTTCT--AA---GACTC----T--GGTA-ACT----GCAG-G--T-T-A--C----------T--TCA-C--TT-----TGTT-----TGATA----G--C-CAAG
i Myotis_lucifugus.GL429869.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2495 66 +     18357 G----------TT--GG-T-G-CAAAGACT--TTTTT--AA---GACTC----T--GGTA-ACT----GCAG-G--T-T-A--C----------T--TCA-C--TT-----TGTT-----TGATA----G--C-CAAG
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120025 67 +    130748 C----------TT---G-T-TGCCTTGACT--T-TCT--AA---GACTC----T--TGTAAACT----GGAG-G--T-T-T--A----------T--TTT-C--AG-----TGTC-----CAATA----CT-C-CAAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946531 66 +   3037898 c----------tt--ct-T-G-ATTAAATT--T-ACC--AA---GAC------TCCAAAA-ACT----AGAG-A--T-T-A--T----------T--TCA-A--TG-----TGTT-----TAATA----CT-C-CAAG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29574 67 +     34575 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CT-C-CACA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232499 64 -   7148211 c----------tT--GG-T-G-C--AGACT--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCC-C--TG-----TGTC-----TGATA----CT-C-CAAG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128508 65 -    149072 g----------tt--gg-t-g-tgtagact--tttct--ga---gactc----t--agta-aca----ggag-gcgt-t-t--t----------t--tca-c--t---------c-----tgata----tc-c-caag
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           53998 66 -    132029 T----------TT--CG-T-G-CATAGATT--T-ACT--AG---GCATC----T--AGCA-ATT----GGAG-G--T-T-A--T----------A--TCC-A--TG-----TGGC-----AGATA----CT-C-CACA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10093 66 -     16345 T----------TT--CG-T-G-CATAGATT--T-ACT--AG---GCATC----T--AGCA-ATT----GGAG-G--T-T-A--T----------A--TCC-A--TG-----TGGC-----AGATA----CT-C-CACA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             15978 66 +     22201 T----------TT--CG-T-G-CATAGATT--T-ACT--AG---GCATC----T--AGCA-ATT----GGAG-G--T-T-A--T----------A--TCC-A--TG-----TGGC-----AGATA----CT-C-CACA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414199 66 -  22158432 T----------TT--CG-T-G-CATAGATT--T-ACT--AG---GCATC----T--AGCA-ATT----GGAG-G--T-T-A--T----------A--TCC-A--TG-----TGGC-----AGATA----CT-C-CACA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26376 66 -     54323 T----------TT--CG-T-G-CATAGATT--T-ACT--AG---GCATC----T--AGCA-ATT----GGAG-G--T-T-A--T----------A--TCC-A--TG-----TGGC-----AGATA----CT-C-CACA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198486 66 +   9404916 C----------GT--GG-T-G-CACAGACT--T-TCT--AA---AACTC----T--AGTA-ACT----GGAG-C--T-T-A--T----------T--TCA-C--TA-----TGTC-----TGACA----CT-C-CAAG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636854 66 + 196305487 C----------GT--CT-A-G-CTCTGAGT--T-TGT--GA---GACTC----C--AGTA-ACT----AGAG-A--T-T-A--T----------T--TCA-C--TG-----GGTC-----TGTTA----CT-C-CCTG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3608 66 -      3937 C----------GT--CT-A-G-CTCTGAGT--T-TGT--GA---GACTC----C--AGTA-ACT----AGAG-A--T-T-A--T----------T--TCA-C--TG-----GGTC-----TGTTA----CT-C-CCTG
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93565113 66 - 199412804 C----------GT--CT-A-G-CTCTGAGT--T-TGT--GA---GACTC----C--AGTA-ACT----AGAG-A--T-T-A--T----------T--TCA-C--TG-----GGTC-----TGTTA----CT-C-CCTG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557161 67 -   3988456 C----------TT--AT-T-G-CATTGATT--T-GTA--AA---GACTC----T--AGTA-ACT----TGAG-G--T-T-A--T----------T--TCA-T--TG-----TATC-----TGATA---ACT-C-CAAG
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055311 65 -  11899542 C----------TT--AT-T-G-CATGAACT--T-AC--TAA---GAC--T--CT--AGTA-ACT----GAAA-G--T-T-A--T----------T--TTA-A--TG-----TAC------CGATG----TT-C-TAAT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1451948 66 +   2017862 c----------tt--gg-t-a-cacagact--t-tct--aa---aactc----t--agta-act----ggag-c--t-t-a--t----------t--TCA-C--TG-----TATC-----TGATA----CT-C-CAAG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436552 63 -    630418 C----------TT--GG-T-A-C--AGACT--T-TCT--GA---GACTC----T--AGTA-AC-----GGAA-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----TG-C-CAAA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14544 64 +    150152 C----------TT--GG-T-A-C--AGACT--T-TCT--GA---GACTC----T--AATA-ACT----GGAA-A--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----CA-C-CAAA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93045 66 -    140218 T----------GT--TG-T-T-TATGGACT--T-AGT--AA---GAC------TTGAGGC-ACT----AGTG-G--T-A-A--T----------T--TTG-A--TG-----TGTT-----TGATA----CT-C-CAAG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3923 66 -     41509 c----------tt--at-t-t-tatggact--t-agt--ga---gac------tcgaggc-tct----agag-a--t-a-a--t----------t--ttg-a--tg-----tgtt-----tgttg----ct-c-caag
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8102889 64 +  10937097 c----------tt--gg-T-G-C--AGACT--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-C-CAAG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_1597630                35 65 -       378 T----------TT---G-T-G-CATTGATT--T-ACT--AA---GATTT----T--AGTA-TGT----AGAG-A--T-C-A--T----------A--TCA-T--TG-----TTTC-----TGATA----CT-C-CAAG
i Orycteropus_afer.OryAfe_flattened_line_1597630         C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103896 66 - 174332312 C----------TT--AT-T-G-CATTGATT--T-ACA--AA---GACTG----T--AGTA-ATC----TGAG-G--T-T-A--T----------T--TCA-T--TA-----TGTC-----TGATA----CT-C-CAAG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39531 66 +    559221 t----------gt--gg-t-g-cacagact--t-tct--aa---aactc----t--agta-act----ggag-c--t-t-a--t----------t--TCA-C--TA-----TGTC-----TGACA----CT-C-CAAG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40409 64 -     51505 ------------t--gt-a-G-CACTGAGT--T-TGT--GA---GATTC----C--AGTA-ACT----AGAG-A--T-T-A--T----------T--TCA-C--TG-----GGTC-----TGTTA----CT-C-CATG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             353412 64 +   1103335 ------------T--GT-A-G-CACTGAGT--T-TGT--GA---GATTC----C--AGTA-ACT----AGAG-A--T-T-A--T----------T--TCA-C--TA-----GGTC-----TGTTA----CT-C-CATG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404456 64 -  44047080 C----------TT--GG-T-A-T--AGACT--T-TCT--GA---GACTC----T--AGTA-ACT----GGAA-G--T-A-A--T----------T--TCA-C--CG-----TGTC-----TGACA----CG-C-CAAA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       4975 64 +     17875 C----------TT--GG-T-A-T--AGACT--T-TCT--GA---GACTC----T--AGTA-ACT----GGAA-G--T-A-A--T----------T--TCA-C--CG-----TGTC-----TGACA----CG-C-CAAA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.KZ622849.1                                 33775 66 -    110857 T----------TT--CG-T-G-CATGGAGT--T-ACT--AG---GCATC----T--AGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Pan_troglodytes.KZ622849.1                             I 113 I 155
s Panthera_onca.PanOnc_flattened_line_3271                   24757 66 -    230217 c----------tt--gg-t-a-cacaggct--t-tct--ag---gactc----t--agta-act----ggag-c--t-t-a--t----------t--TCA-T--GA-----TGTC-----TGATA----CT-C-CAAG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462083 66 -  18783137 C----------TT--GG-T-A-CACAGGCT--T-TCT--AG---GACTC----T--AGTA-ACT----GGAG-C--T-T-A--T----------T--TCA-T--GA-----TGTC-----TGATA----CT-C-CAAG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972742 66 +   8748460 C----------TT--GG-T-A-CACAGGCT--T-TCT--AG---GACTC----T--AGTA-ACT----GGAG-C--T-T-A--T----------T--TCA-T--GA-----TGTC-----TGATA----CT-C-CAAG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1615984 64 +   2937107 C----------TT--GG-T-A-C--AGACT--T-TCT--GA---GACTC----T--AGTA-ACT----GGAA-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----CG-C-CAAA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243723 67 - 183742232 T----------TT--CG-T-G-CATGGATT--TTACT--CG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10185 67 +     21308 T----------TT--CG-T-G-CATGGATT--TTACT--CG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292758 67 -  20919399 T----------TT--CG-T-G-CATGGATT--TTACT--CG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22833 67 -     27687 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    15979 67 +     16796 T----------TT--CG-T-G-CATGGATT--TTACT--CG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22790 67 -     23640 T----------TT--CG-T-G-CATGGATT--TTACT--CG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15354 66 +     78924 C----------TT--GG-T-A-CACAGACT--T-TCT--AA---GACTC----T--ACTA-ACT----GGAG-C--T-T-A--T----------T--TCA-C--GG-----TGTC-----TGATA----CT-C-CAAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26605 66 +     31479 C----------TT--AT-A-G-CACTGAGT--T-TGT--CA---GACTC----T--AGTA-ACT----AGAG-A--T-T-A--T----------T--TCA-C--TG-----GGTC-----TGTTA----CT-C-CATG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            18975 66 -     24908 C----------TT--AT-A-G-CACTGAGT--T-TGT--CA---GACTC----T--AGTA-ACT----AGAG-A--T-T-A--T----------T--TCA-C--TG-----GGTC-----TGTTA----CT-C-CATG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2078 63 +      9367 C----------TT--GCAT-C-CATGGACT--G-A----GT---CTG------C--AGGT-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----CATC-----TCACA----TA-C-CAAA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247120 66 +  18517816 C----------TT--GT-T-T-TGTGGACT--T-AGT--GA---GAC------TCGAGGC-ACT----AGAG-G--T-A-A--T----------T--TTG-A--TG-----TGTT-----TAGTA----CT-T-CAAG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32218 66 -     56120 C----------TT--GT-T-G-CATGGACT--T-ACT--AA---CGC--T--CT--AGTA-ACT----AGAA-A--T-T-A--T----------T--TTA-A--TG-----TATT-----TGATA----TT-C-CCAG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4415 64 -     63832 c----------tT--GG-T-G-C--AGACT--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-C-CAAG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3009 67 +     55023 T----------TT--CA-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-G--CG-----TGTC-----AGACA----CT-C-CACA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2547 67 -     89929 T----------TT--CA-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-G--CA-----TGTC-----AGACA----CT-C-CACA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3137 67 +     40849 T----------TT--CA-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-G--CA-----TGTC-----AGACA----CT-C-CACA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254811 67 +  14605196 t----------tt--ca-t-g-gatggATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-G--CA-----TGTC-----AGACA----CT-C-CACA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4034 66 +     22231 G----------TT--GT-T-G-CAAAGACT--TTTCT--GA---GTCTC----T--GGTA-ACT----GTAG-G--T-T-A--C----------T--TCA-C--TT-----TGTT-----TGATA----G--C-CAAG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65137 44 +    207309 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--CG-----TGTC-----TGATA----TT-C-CACA
i Pithecia_albicans.k141_1239476                         I 12 C 0
s Pithecia_chrysocephala.k141_785207                          6229 44 -     25401 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--CG-----TGTC-----TGATA----TT-C-CACA
i Pithecia_chrysocephala.k141_785207                     I 12 C 0
s Pithecia_hirsuta.k141_640380                               31973 44 +     58159 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Pithecia_hirsuta.k141_640380                           I 12 C 0
s Pithecia_mittermeieri.k141_1280039                         32249 44 +     63561 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--CG-----TGTC-----TGATA----TT-C-CACA
i Pithecia_mittermeieri.k141_1280039                     I 12 C 0
s Pithecia_pissinattii.k141_878371                           32009 44 +     51148 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--CG-----TGTC-----TGATA----TT-C-CACA
i Pithecia_pissinattii.k141_878371                       I 12 C 0
s Pithecia_pithecia.tarseq_165                              556979 44 -   4542175 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--CG-----TGTC-----TGATA----TT-C-CACA
i Pithecia_pithecia.tarseq_165                           I 12 C 0
s Pithecia_vanzolinii.k141_1369553                           31993 44 +     51125 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--CG-----TGTC-----TGATA----TT-C-CACA
i Pithecia_vanzolinii.k141_1369553                       I 12 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1413 64 +     19503 C----------TT--GG-T-G-C--AGACT--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----CT-C-CAAG
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8404 44 +     39866 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Plecturocebus_bernhardi.k141_2549090                   I 12 C 0
s Plecturocebus_brunneus.k141_862875                          3486 44 -      9282 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Plecturocebus_brunneus.k141_862875                     I 12 C 0
s Plecturocebus_caligatus.k141_1382851                       42890 44 -     87950 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Plecturocebus_caligatus.k141_1382851                   I 12 C 0
s Plecturocebus_cinerascens.k141_1164729                     43286 44 -     88961 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Plecturocebus_cinerascens.k141_1164729                 I 12 C 0
s Plecturocebus_cupreus.k141_2351393                          7982 44 -     39403 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Plecturocebus_cupreus.k141_2351393                     I 12 C 0
s Plecturocebus_dubius.k141_1058799                          42933 44 +     87928 ---------------------------------------------TATC----T--AGTA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Plecturocebus_dubius.k141_1058799                      I 12 C 0
s Plecturocebus_grovesi.k141_2013005                          7981 44 -     60166 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Plecturocebus_grovesi.k141_2013005                     I 12 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14918 44 -     67232 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Plecturocebus_hoffmannsi.k141_3303950                  I 12 C 0
s Plecturocebus_miltoni.k141_349282                          42834 44 -     90634 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Plecturocebus_miltoni.k141_349282                      I 12 C 0
s Plecturocebus_moloch.k141_1031110                          44301 44 +     89403 ---------------------------------------------TATC----T--AGCA-ACT----GGAG-G--T-G-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Plecturocebus_moloch.k141_1031110                      I 12 C 0
s Pongo_abelii.CM009266.2                                   178201 66 - 189387572 t----------tt--cg-t-g-cATGGGTT--T-ACT--AG---GCATC----T--AGCA-ACT----GGAG-G--T-T-A--T----------A--TCG-A--TG-----TGTC-----AGATA----CT-C-CACA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193018 66 -   9816681 T----------TT--CG-T-G-CATGGGTT--T-ACT--AG---GCATC----T--AGCA-ACT----GGAG-G--T-T-A--T----------A--TCG-A--TG-----TGTC-----AGATA----CT-C-CACA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28154 67 +     69807 T----------TT--CG-T-G-CATGGATT--TTCCT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--GCA-A--CG-----TGTC-----AGATA----CT-C-CACA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45335 67 -     80239 T----------TT--CG-T-G-CATGGATT--TTCCT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--GCA-A--CG-----TGTC-----AGATA----CT-C-CACA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 1113 63 +      7663 C----------TC---G-T-A-CACTGACT--T-ATT--GA---GACGT----T--AGTA-CCT----GGAG-G--T-T-A--T----------T--CCA-C--T-------GTC-----TGACG----CC-T-CAAG
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982883 66 +   4620579 C----------CT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-G--TG-----GGTC-----TGTTA----CT-C-CAAG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566390 66 -   2598838 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TGTTA----CT-C-CAAG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4028 66 -      7103 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TGTTA----CT-C-CAAG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4625 66 -     11706 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TGTTA----CT-C-CAAG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8363 66 -     30655 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TGTTA----CT-C-CAAG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34676 66 +     46564 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TGTTA----CT-C-CAAG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       94955 66 -     98465 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TGTTA----CT-C-CAAG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8594 66 +     35169 C----------TT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----GGTC-----TGTTA----CT-C-CAAG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37728 65 +     52041 C----------TT--GT-T-T-CATGGACT--C--CC--AA---GTC------TCCAGGC-ACT----AGTG-A--T-A-A--T----------T--TTG-A--TG-----TGTT-----TGACA----AT-C-CAAA
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52432 40 -     66298 G----------TT--GG-T-G-CATAGACT--TTTCT--AA---GACCC----T--ACTA-ACA----GGAG-G----------------------------------------------------------------
i Pteronotus_parnellii.KE847780.1                        C 0 I 26
s Pteronura_brasiliensis.PteBra_flattened_line_48144          4946 66 -     18639 C----------TT--GG-T-A-GACAGACT--T-TCT--AA---AACTC----T--AGTA-ACT----GGAG-C--T-T-A--T----------T--CCA-C--TG-----TATC-----TGATA----CT-C-CAAG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099400 66 +  38429054 C----------TT--GG-T-A-CACAGGCT--T-TCT--AG---GACTC----T--AGTA-ACT----GGAG-C--T-T-A--T----------T--TCA-T--GA-----TGTC-----TGATA----CT-C-CAAG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27530 67 +     91421 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CT-C-CACA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154014 67 -   7812017 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CT-C-CACA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8387 67 +     72585 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CT-C-CACA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53472 60 +     55069 ---------------gG-T-A-C--AGACT--T-TCT--GA---GACTC----T--CGTA-AC-----GGAA-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----TG-C-CAAA
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 1 C 0
s Rattus_norvegicus.chr16                                 37023011 65 -  90668790 C----------TT--GT-T-T-CATGGACT--T-ACT--AA---TTC------TCCAGGT-ACT----AGTG-G--T-A-A--T----------T--TTG-A--TG-----TGTT-----TGACA----CT-C--AAG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915004 62 +   3329780 ---------------GG-T-A-CATAGACT--T-TCT--AA---GACTG----T--AGTA-ACC----A-AG-G--G-T-A--T----------T--TCT-C--CG-----TGTA-----TGATA----TT-C-CAAG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2108 67 +      7119 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CT-C-CACA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122724 67 + 195417433 t----------tt--cg-t-g-catgGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CT-C-CACA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             236950 67 -   7961872 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CT-C-CACA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75074 58 -    116970 -----------------------GTAGACT--T-TCT--GA---GATTC----C--TGTA-ACT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----GGTC-----TGATA----CT-C-CAAG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 6 C 0
s Saguinus_bicolor.k141_1429097                               4294 43 +     27962 ---------------------------------------------CAT-----T--AGCA-ACT----GGAG-G--A-T-A--T----------T--TCA-A--TG-----TGCC-----TGATA----TT-C-CACA
i Saguinus_bicolor.k141_1429097                          I 12 C 0
s Saguinus_geoffroyi.k141_3779887                             4188 43 +      6077 ---------------------------------------------CAT-----T--AGCA-ACT----GGAG-G--A-T-A--T----------T--TCA-A--CG-----TGCC-----TGATA----TT-C-CACA
i Saguinus_geoffroyi.k141_3779887                        I 12 C 0
s Saguinus_imperator.k141_1898058                             4278 43 +      5971 ---------------------------------------------CAC-----T--AGCA-ACT----GGAG-G--A-T-A--T----------T--TCA-A--TG-----TGCC-----TGATA----TT-C-CACA
i Saguinus_imperator.k141_1898058                        I 12 C 0
s Saguinus_inustus.k141_2469308                               4199 43 +      5932 ---------------------------------------------CAT-----T--AGCA-ACT----GGAG-G--A-T-A--T----------T--TCA-A--CG-----TGCC-----TGATA----TT-C-CACA
i Saguinus_inustus.k141_2469308                          I 12 C 0
s Saguinus_labiatus.k141_2380921                              2541 43 -      4390 ---------------------------------------------CAT-----T--AGCA-ACT----GGAG-G--A-T-A--T----------T--TCA-A--CG-----TGCC-----TGATA----TT-C-CACA
i Saguinus_labiatus.k141_2380921                         I 12 C 0
s Saguinus_midas.LG03                                       391978 43 - 209938924 ---------------------------------------------CAT-----T--AGCA-ACT----GGAG-G--A-T-A--T----------T--TCA-A--CG-----TGCC-----TGATA----TT-C-CACA
i Saguinus_midas.LG03                                    I 12 C 0
s Saguinus_mystax.k141_8077960                                4148 43 +      5979 ---------------------------------------------CAT-----T--AGCA-ACT----GGAG-G--A-T-A--T----------T--TCA-A--CG-----TGCC-----TGATA----TT-C-CACA
i Saguinus_mystax.k141_8077960                           I 12 C 0
s Saguinus_oedipus.k141_1280589                                717 43 -     22275 ---------------------------------------------CAT-----T--AGCA-ACT----GGAG-G--A-T-A--T----------T--TCA-A--CG-----TGCC-----TGATA----TT-C-CACA
i Saguinus_oedipus.k141_1280589                          I 12 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8144 64 +     16473 C----------TT--GG-T-A-C--AGACT--T-TCT--GA---GACTC----T--AGTA-ACT----GGAA-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGACA----CG-C-CAAA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109315 41 + 121099817 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C---CA
i Saimiri_boliviensis.NW_024100920.1                     I 12 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30882 41 -     47369 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C---CA
i Saimiri_cassiquiarensis.k141_1467335                   I 12 C 0
s Saimiri_macrodon.k141_1173117                              31268 41 -     79414 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C---CA
i Saimiri_macrodon.k141_1173117                          I 12 C 0
s Saimiri_oerstedii.k141_245838                              27959 41 -     34454 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C---CA
i Saimiri_oerstedii.k141_245838                          I 12 C 0
s Saimiri_sciureus.k141_1467173                              15360 41 -     22428 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C---CA
i Saimiri_sciureus.k141_1467173                          I 12 C 0
s Saimiri_ustus.k141_360372                                  30514 41 -     47109 ---------------------------------------------TAT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C---CA
i Saimiri_ustus.k141_360372                              I 12 C 0
s Sapajus_apella.ctg103                                     238558 43 +   5703754 ---------------------------------------------TGT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Sapajus_apella.ctg103                                  I 12 C 0
s Sapajus_macrocephalus.k141_796559                           8148 43 +     21866 ---------------------------------------------TGT-----T--AGCA-ACT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----TT-C-CACA
i Sapajus_macrocephalus.k141_796559                      I 12 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116184 37 +    313613 ---------------AG-T-A-TATAGATG--T-TCT--AA---GACTC----T--GGTA-AAT----GGAG-A--T-------------------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 23
s Semnopithecus_entellus.k141_158471                         25849 67 +     27374 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29361 67 +     58920 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15859 67 -     45317 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23517 67 -     42441 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26195 67 -     29113 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29270 67 -     48123 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49498 66 +     77746 C----------TT--GT-T-T-TATGGACT--T-AGT--AA---GAT------TCCAGGC-ACT----GGTG-G--C-A-A--T----------T--TAG-A--TG-----TGGT-----TGATA----CT-T-CAAG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864467 37 -   1910179 C----------TA--GG-T-G-TGTAGACT--T-CAT--AA---GAGTC----A--ATTA-TCT----T----G--T-------------------------------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 23
s Sorex_araneus.JH798187.1                                 4671605 22 +  18376816 C----------TT--GG-T-G-CATTGACT--T-TCT--AA---G---------------------------------------------------------------------------------------------
i Sorex_araneus.JH798187.1                               C 0 I 30
s Spermophilus_dauricus.KZ294078.1                         1868652 64 +   3870691 -----------TC--GT-T-G-CATGGACT--T-ACT--AA---GAA--T-T-T--AGTA-GCT----GGAG-G--T-T-A--T----------T--TCA-G--T------TATC-----CAATA----TT-C-CAAG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7030 66 -     97271 C----------TT--GG-T-A-CACAGACT--T-TCT--AA---AACTC----T--AGTA-ACA----GGAG-C--T-T-A--T----------T--CCA-C--TG-----TATC-----TGTTA----CT-C-TAAG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125180 64 +    196729 C----------TT--GG-T-A-CACAGACT--T-CCT--AA---GAC------T--AGTA-ACT----GGAG-C--T-G-A--T----------T--TCA-C--GG-----TGTT-----TGATA----CT-C-AAAG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644050 65 +  69701581 C----------TT--GG-T-G-CATAGACT--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-A--T-A-G--T----------T--TCA-C--CA-----TGTT-----TGATA-----T-C-CAAG
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391458 66 +   1523678 T----------TT--CG-T-G-CATAGATT--T-ACT--AG---GCATC----T--AGCA-ATT----GGAG-C--T-T-A--T----------A--TCC-A--TG-----TGTC-----AGATA----CT-C-CACA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14597 66 +     22964 G----------TT--GG-T-G-CAGAAACT--ATTCT--AA---GATGC----T--AGTA-ACT----GGAG-G--T-T-A--T----------T--TCA-C--TT-----TGTC-----TGATA----T--G-CAAG
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3014 67 +      5583 C----------TC---G-T-TGCCTTGACT--T-TCT--AA---GACTC----T--CGTAAACT----GGAG-G--T-T-T--A----------T--TTT-C--TG-----TGTC-----CAATA----CT-C-CAAG
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 2
s Tapirus_indicus.TapInd_scaffold_7432                      191903 66 +    199430 c----------tt--gg-t-g-cacagact--t-tct--aa---gactc----t--agta-act----ggag-g--t-t-A--T----------T--TCA-T--TG-----TGTC-----TGAAA----CT-C-CAAG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105873 66 -    539355 c----------tt--gg-t-g-cacagact--t-tct--aa---gactc----t--agta-atg----ggag-g--t-t-A--T----------T--TCA-T--TG-----TGTC-----TGAAA----CT-C-CAAG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                 939 48 +      9917 C----------TT--GC-T-T-CCTTGACT--T-ACT--AA---GGCTC----T--AGTA-AAT----GAAG-G--T-T-A--T----------T--TCA-A------------------------------------
i Tarsius_lariang.k141_1733899                           C 0 I 16
s Tarsius_wallacei.k141_226975                                7737 48 +     20590 C----------TT--GC-T-T-CCTTGACT--T-ACT--AA---GGCTC----T--AGTA-AAT----GAAG-G--T-T-A--T----------T--TCA-A------------------------------------
i Tarsius_wallacei.k141_226975                           C 0 I 16
s Theropithecus_gelada.CM009954.1                           353709 67 - 186847797 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CT-C-CACA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24377 66 -     33621 C----------TT--GT-T-G-CATGAACT--T-ACT--AA---GAC--T--CT--AGTG-ACT----GGAA-G--T-T-A--T----------T--TTA-A--TG-----TATT-----TAATA----TT-C-CAAG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20117  1 -     31044 C-----------------------------------------------------------------------------------------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 18
s Tonatia_saurophila.TonSau_scaffold_294                    480427 65 -    610378 G----------TT--GG-T-G-C--GGACT--TTTCT--AA---GAC------T--AGCA-ACA----GGAG-GTAT-T-A--C----------T--TCG-T--TT-----TGTC-----TGACA----GT-C-CATG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21394 67 +     26378 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----TA-C-CACC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34070 67 -     78344 T----------TT--CG-T-G-CATGGATT--TTTCT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20719 67 +     25722 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----TA-C-CACC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29026 67 -     62838 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29070 67 +     46913 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9879 67 -     28527 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      30961 67 -     64340 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          28999 67 -     63452 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--TG-----TGTC-----AGATA----CA-C-CACC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10446 67 +     22490 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3869 67 -      6147 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10782 67 -     13050 T----------TT--CG-T-G-CATGGATT--TTTCT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256012 67 -   6242583 T----------TT--CG-T-G-CATGGATT--TTTCT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2040 67 +     19340 T----------TT--CG-T-G-CATGGATT--TTACT--AG---GCATC----T--GGCA-ACT----GGAG-G--T-T-A--T----------A--TCA-A--CG-----TGTC-----AGATA----CA-C-CACC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173756 64 -    200418 g----------TT--GG-T-A-C--AGACT--T-TCT--GA---GACTC----A--AGTA-ACT----GGAG-G--T-A-A--T----------T--TTA-C--TG-----TGTC-----TAATA----CT-C-CAAG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480739 65 -  10818551 C----------TT---G-T-G-CATTGATT--T-ACT--AA---GACTT----T--AGTA-CCT----GGAG-G--T-T-A--T----------T--TCA-A--TG-----TGTC-----TGATA----CC-C-CAAG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834679 67 -   4065304 t----------tt--tt-t-g-caTTGACT--T-GGT--AA---GACTC----C--AGTA-ACT----GGAG-G--T-C-A--T----------TT-TCA-A--TG-----TGTC-----TGCTA----CT-C-CAAA
i Tupaia_chinensis.KB320699.1                            I 278 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8702 66 -     70247 T-----------T--TT-T-G-CATTGACT--T-AGT--AA---GACTC----C--AGTA-ACT----GGAG-G--T-C-A--T----------TT-TCA-A--TG-----TGTC-----TGATA----CT-C-CAAA
i Tupaia_tana.TupTan_flattened_line_394                  I 276 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366002 64 -  33153633 C----------TT--GG-T-G-C--AGACT--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-C-CAAG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3923 39 -     21056 -----------TT--AG-T-A-CATAGATG--T-TCT--AA---GACTT----A--AGTA-GAT----AGAG-A--T-------------------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 19
s Ursus_maritimus.KK499267.1                                182118 65 +   5085361 c----------tt--gg-t-a-cacagact--t-tct--aa---aactc----t--agta-act----ggag-c--t-t-a--t----------t--TCA-C--TG-----TATC-----TGATA----CT-C--AAG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25531 66 -     30710 C----------CT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----AGTC-----TGTTA----CT-C-CAAG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24438 66 -    147434 C----------CT--GT-A-G-CATTGACT--T-AGT--AA---GACTC----T--AGTG-ACT----GGAG-A--T-T-A--T----------T--TCA-A--TG-----AGTC-----TGTTA----CT-C-CAAG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76582 66 +   5488506 C----------CT--GG-T-G-CACAGACT--T-TCT--AA---GACTC----T--AGTA-GCT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATA----CT-T-CAAG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105252 66 -    112863 a----------at--gg-t-g-cacagact--t-tct--aa---aactc----t--agta-act----ggag-c--t-t-a--t----------t--TCA-C--TA-----TGTC-----TGACA----CT-C-CAAG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174443 68 -    224448 T----------TT--GT-T-G-CATGGACTTTT-ATT--AA---GAC--T--CT--AGTA-GCT----GGAG-G--T-T-A--T----------T--TCA-G--TG-----TGTC-----CAATA----TT-C-CAAG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29156 66 -     86975 c----------tt--gg-t-a-cacagact--t-tct--aa---aactc----t--agta-act----ggag-c--t-t-a--t----------t--TCA-C--TG-----TATC-----TGATA----CT-C-CAAG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1293 62 +      2126 C----------TT--GG-T-G-C--AG--T--T-TCT--AA---GACTC----T--AGTA-ACT----GGAG-G--T-A-A--T----------T--TCA-C--TG-----TGTC-----TGATT----CT-C-CAAG
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Echinops_telfairi.JH980293.1                            62855344  1 - 111700974 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Zapus_hudsonius.ZapHud_scaffold_286923                       349  0 -      1899 C
e Pteropus_vampyrus.KN525825.1                             3537603  0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5841088  0 -  28871421 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5814 3 +     36723 GTC
s Acinonyx_jubatus.LLWD01001279.1                           813208 3 +   1699592 CTC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25456 3 +     63021 GTT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415669 3 +  29979442 GTC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216004 3 +    347723 GTC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18420 3 -     61208 GTC
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48452 3 +     53615 GTC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           483 3 +     13857 GTC
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17033 3 -     21945 GTC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18719 3 +     32033 GTC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72543 3 -     84148 GTC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44782 3 -     78289 GTC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44221 3 +     55831 GTC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42671 3 -     64179 GTC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24305 3 -     24835 GTC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41296 3 +     45454 GTC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46945 3 +     70886 GTC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9118 3 +     30854 GTC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33252 3 +     42133 GTC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585653 3 +   2318259 ATC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177455 3 -    412891 GTC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50759 3 -     68529 ATC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1509 3 +     17741 GTC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2134 3 -     15923 GTC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672416 3 +   5030052 GTC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2410 3 -     16391 GTC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1969 3 -     17186 GTC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16489 3 -     32367 ATC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19876 3 -     45910 GTT
i Arctocebus_calabarensis.k141_1364444                   C 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5721 3 -     15198 GTC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275006 3 +  21539123 GTC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11174 3 +     48076 GTC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6309 3 -     28759 GCC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33863 3 +     44353 GTC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49234 3 -     71267 GTC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23292 3 -     33135 GTC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6561 3 +     11645 GTC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6569 3 -     19611 GTC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963802 3 -  23207421 GTC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          302 3 -     25979 GTC
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86661 3 +    124022 ATC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22195 3 +    288883 ATC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356587 3 +  48749331 ATC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755151 3 +   1948126 ATC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545293 3 -  45695690 ATC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530314 3 -   4408762 ATC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8183 3 +     28062 GTC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43477 3 -     91139 GTC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21003 3 +     95584 GTC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20916 3 +    119600 GTC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10489 3 +     18648 GTC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10024 3 -     13885 GTC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2094 3 -      8861 GTC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454486 3 + 189096842 GTC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2009 3 +      8664 GTC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631315 3 +  17673402 GCC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665601 3 +   7040546 GCC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209261 3 +   1652518 GCC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505687 3 +  60362399 GTC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9323 3 -     23171 GTC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222666 3 +   9314153 GTC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615801 3 +  59632846 GTC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107382 3 -  63665305 GTC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409382 3 -  46296322 AGC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591656 3 +  44709034 AGC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1843 3 -      1880 GTC
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270770 3 +    496798 GTC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                577 3 +      9923 GTC
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27974 3 -     39886 TTC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79856 3 -    217609 GTC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996722 3 +  23392119 GTC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000163 3 +  23407841 GTC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63244 3 -     66877 GTC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5407 3 -     12580 GTC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43465 3 +     53515 GTC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371393 3 -  26074798 GTC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8282 3 -     34880 GTC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67377 3 -     89041 GTC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2730 3 -      5494 GTC
i Cephalopachus_bancanus.k141_1689090                    I 16 C 0
s Ceratotherium_simum.JH767749.1                          15492490 3 -  27778364 GTC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19323 3 +     27315 GTC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141608 3 -   4669795 GTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45351 3 +     47900 GTC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            455 3 -     14410 GTC
i Cercocebus_lunulatus.k141_2500334                      C 0 I 325
s Cercocebus_torquatus.k141_2159127                          45164 3 -    148725 GTC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27366 3 -     40656 GTC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7330 3 +     20796 GTC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12448 3 -     17524 GTC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28175 3 -     34525 GTC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11951 3 -     25376 GTC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364545 3 -  39242232 GTC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270265 3 +  21565898 GTC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32633 3 -     45857 GTC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27534 3 -     32606 GTC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3696 3 +      8499 GTC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26092 3 +     70610 GTC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23060 3 +     36323 GTC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             30934 3 -     33796 GTC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5451 3 -     15404 GTC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9283 3 -     32913 GTC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19696 3 -     40346 GTC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19951 3 +    216457 GTC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19744 3 +     39636 GTC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239078 3 -   2543920 GTC
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4339 3 +      5346 GTC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42814 3 -    112038 GTC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8385 3 +     34062 GTC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343954 3 +  18827391 GTC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10502 3 -     44032 GTC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305279 3 - 135778131 GTC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15127 3 +     15858 GTC
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606702 3 -    839153 GTC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1116 3 +      2406 TTC
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          I 68 C 0
s Colobus_angolensis.KN981557.1                             409684 3 -   2368649 GTC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379565 3 - 200372422 GTC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3122 3 -     84244 GTC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807552 3 +  53390261 GTC
i Condylura_cristata.JH655891.1                          I 22 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3083 3 -      8242 ATC
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44597 3 -     83289 GTC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115166 3 - 224834208 GTC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9717 3 +     12657 GTT
i Crocidura_indochinensis.CroInd_scaffold_77846          I 29 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4660 3 +     87169 GTC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645284 3 -   1526836 ATC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18638 3 +     50838 GTC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4639 3 +     36344 GTC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28415 3 +     75252 ATC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292870 3 +  12879189 GTC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632210 3 -  35494412 GTC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330773 3 -   2620052 GTC
i Desmodus_rotundus.KZ672366.1                           I 67 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664774 3 -   1390856 GTC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139567 3 -    198055 GTC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99166 3 -    115145 TCC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950800 3 -  37912305 GTC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5725 3 -     10735 GTC
i Dipodomys_stephensi.DipSte_scaffold_89095              I 10 C 0
s Eidolon_helvum.AWHC01266696.1                               6547 3 +     19438 GTC
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240022 3 -    607251 ATC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9109073 3 -  10337057 ttc
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31314 3 +    110024 GTC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13285 3 +     18970 GTC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916417 3 +  41312741 GTC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579192 3 +  14770903 GTC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041652 3 -   4378816 GTC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375590 3 +  39960074 GTC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             971 3 -      1194 GTC
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666357 3 +   7059049 GTC
i Erinaceus_europaeus.JH835339.1                         I 24 C 0
s Erythrocebus_patas.Contig38                               263492 3 +  21539334 GTC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71419 3 -    133382 GTC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202              963 3 -      1170 GTC
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               15083 3 -     24895 GTC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42793 3 -     70999 GTC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86763 3 +    112731 GTC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43326 3 +     68309 GTC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53650 3 -     65740 GTC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24282 3 -     75513 GTC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48477 3 -     97555 GTC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5201 3 +     30972 GTC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42921 3 -     52037 GTC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59324 3 -    111500 GTC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247117 3 - 206538554 CTC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116903 3 - 205367284 CTC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28000 3 -     30238 CTC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916720 3 -   3816255 GTC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     125326 3 -    137831 CTT
i Galago_moholi.ctg3793                                  C 0 I 3
s Galago_senegalensis.k141_991736                             8871 3 +     22493 CTT
i Galago_senegalensis.k141_991736                        C 0 I 3
s Galagoides_demidoff.k141_561628                            20942 3 -     32986 CTT
i Galagoides_demidoff.k141_561628                        C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_51812                1462 3 -     28519 GTC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91725 3 -     95226 ATC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34789 3 -     36801 GTC
i Glis_glis.GliGli_scaffold_33859                        I 29 C 0
s Gorilla_beringei.k141_3358147                               6114 3 -      8343 GTC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255129 3 - 186649187 GTC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2285 3 -     78134 GTC
i Graphiurus_murinus.GraMur_scaffold_10447               I 29 C 0
s Hapalemur_alaotrensis.k141_330369                          15008 3 -     40692 GTC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36410 3 +     49394 GTC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61278 3 -     66874 GTC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10152 3 -     42923 GTC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17151 3 -     53142 GTC
i Hapalemur_occidentalis.k141_578367                     I 26 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31093 3 -    327341 GTC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9400 3 +     48891 ATC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932696 3 -  22651954 GTC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                1351 3 +      4291 TGC
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7923 3 -     36432 GTC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551904 3 -   1711038 ATC
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1344 2 -      2730 -TC
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143138 3 -    630532 GTC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70257 3 +     83186 GTC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72159 3 +    143317 GTT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6172 3 +     12352 GTC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13356 3 +     55766 GTC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052956 3 + 191637585 GTC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801834 3 +  11177569 GTC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4802 3 -    135385 GTC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387137 3 +   7955117 ATC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2705 3 +     11955 GTC
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10311 3 -     16823 GTC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240179 3 +   9596543 GTC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72154 3 -     97402 ATC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43559 3 +    110728 GTC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63163 3 -     65777 GTC
i Lasiurus_borealis.LasBor_scaffold_16567                I 54 C 0
s Lemur_catta.scaffold_24                                 14759801 3 +  30322482 GTC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4473 3 -     13097 GTC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4227 3 +      5940 GTC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4057 3 -      5717 GTC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10429 3 -     11567 GTC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11810 3 -     12945 GTC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9311 3 +     29618 GTC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9307 3 +     31569 GTC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9317 3 +     24756 GTC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9317 3 +     16388 GTC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813794 3 -   3914936 GTC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18168 3 +     24238 GTC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341496 3 +    662738 GTC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334493 3 -   1826925 GTC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10892 3 +     19643 GTT
i Loris_lydekkerianus.k141_2031736                       C 0 I 3
s Loris_tardigradus.ctg83                                  5044555 3 -   6120653 GTT
i Loris_tardigradus.ctg83                                C 0 I 3
s Loxodonta_africana.GL010049.1                           39081986 3 +  43346337 ttc
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614956 3 +  59628241 GTC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45888 3 -     61512 GTC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373550 3 -  60120075 GTC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25812 3 +     30207 GTC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             650 3 -      5035 GTC
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25765 3 +     30527 GTC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36941 3 -     50087 GTC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46685 3 +     51645 GTC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415888 3 - 187317192 GTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400118 3 +  25927173 GTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49290 3 -     62418 GTC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1827 3 +     14901 GTC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45762 3 +     59329 GTC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271670 3 +    668171 GTC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   314 3 -      5049 GTC
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3468 3 +     17132 GTC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223517 3 -    270270 GTC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322958 3 +  24302211 GTC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357789 3 -    752769 GTC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673844 3 -    737560 GTC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221140 3 +    317179 GTC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501356 3 +  40650429 ATC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150689 3 +    207569 CTC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26563 3 -     74585 GTC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50450 3 -    140813 ATC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429550 3 +  29670104 GTC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87780 3 +     93471 GTC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10596 3 +     17804 GTC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11096 3 -     12984 GTC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19412 3 -     26561 GTC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985147 3 +  93316391 GTC
i Microcebus_murinus.CM007674.1                          I 230 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46477 3 +    145209 ATT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185377 3 +    200668 GTC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962754 3 +  27267610 GTC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363540 3 -   8254450 GTC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42447 3 -     48117 GTC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22992 3 -     27822 GTC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8805 3 +     27589 GTC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52934 3 -     62432 gtc
i Mirza_zaza.k141_766280                                 I 220 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359885 3 +    437263 GTC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179605 3 +    366855 CTC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25847 3 -     82753 ATC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18844 3 -     63510 GTC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39505 3 +     47283 GTC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593474 3 + 120012414 TTC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687860 3 + 129401213 GTC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497153 3 + 130317789 GTC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83841 3 -     86153 GTC
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 27 C 0
s Mustela_putorius.JH418006.1                             14355439 3 +  14710649 GTC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63423 3 +     67721 GTC
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793793 3 +  10118263 GTC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387924 3 +   6019432 GTC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383752 3 +   4330536 GTC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2561 3 +     18357 GTC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120092 3 +    130748 CTC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946597 3 +   3037898 ATC
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29641 3 +     34575 GTC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232563 3 -   7148211 GTC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128573 3 -    149072 ggc
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54064 3 -    132029 GTC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10159 3 -     16345 GTC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16044 3 +     22201 GTC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414265 3 -  22158432 GTC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26442 3 -     54323 GTC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198552 3 +   9404916 GTC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636920 3 + 196305487 GTT
i Nycticebus_bengalensis.LG01                            C 0 I 3
s Nycticebus_coucang.k141_3846325                             3674 3 -      3937 GTT
i Nycticebus_coucang.k141_3846325                        C 0 I 3
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93565179 3 - 199412804 GTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 3
s Ochotona_princeps.JH802162.1                             2557228 3 -   3988456 TTT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055376 3 -  11899542 GCT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452014 3 +   2017862 TTC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436615 3 -    630418 ATC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14608 3 +    150152 ATC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93111 3 -    140218 GTC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3989 3 -     41509 gtc
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8102953 3 +  10937097 GTC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_1597630               100 3 -       378 TTT
i Orycteropus_afer.OryAfe_flattened_line_1597630         C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103962 3 - 174332312 GTC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39597 3 +    559221 GTC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40473 3 -     51505 CTT
i Otolemur_crassicaudatus.k141_649260                    C 0 I 3
s Otolemur_garnettii.GL873799.1                             353476 3 +   1103335 CTT
i Otolemur_garnettii.GL873799.1                          C 0 I 3
s Ovis_aries.CM001607.2                                   26404520 3 -  44047080 ATC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5039 3 +     17875 ATC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473158 3 - 189151597 GTC
i Pan_troglodytes.CM009242.2                             I 66 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24823 3 -    230217 CTC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462149 3 -  18783137 CTC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972808 3 +   8748460 CTC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616048 3 +   2937107 ATC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243790 3 - 183742232 GTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10252 3 +     21308 GTC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292825 3 -  20919399 GTC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22900 3 -     27687 GTC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16046 3 +     16796 GTC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22857 3 -     23640 GTC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15420 3 +     78924 GTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26671 3 +     31479 GTT
i Perodicticus_ibeanus.k141_1921260                      C 0 I 3
s Perodicticus_potto.k141_1854441                            19041 3 -     24908 GTT
i Perodicticus_potto.k141_1854441                        C 0 I 3
s Perognathus_longimembris.PerPac_flattened_line_89005        2141 3 +      9367 GTC
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247186 3 +  18517816 GTC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32284 3 -     56120 GTC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4479 3 -     63832 GTC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3076 3 +     55023 GTC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2614 3 -     89929 GTC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3204 3 +     40849 GTC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254878 3 +  14605196 GTC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4100 3 +     22231 GTC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65181 3 +    207309 GTC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6273 3 -     25401 GTC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32017 3 +     58159 GTC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32293 3 +     63561 GTC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32053 3 +     51148 GTC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557023 3 -   4542175 GTC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32037 3 +     51125 GTC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1477 3 +     19503 GTC
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8448 3 +     39866 GTC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3530 3 -      9282 GTC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42934 3 -     87950 GTC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43330 3 -     88961 GTC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8026 3 -     39403 GTC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42977 3 +     87928 GTC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8025 3 -     60166 GTC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14962 3 -     67232 GTC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42878 3 -     90634 GTC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44345 3 +     89403 GTC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178267 3 - 189387572 GTC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193084 3 -   9816681 GTC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28221 3 +     69807 GTC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45402 3 -     80239 GTC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 1176 3 +      7663 TGC
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982949 3 +   4620579 GTC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566456 3 -   2598838 GTC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4094 3 -      7103 GTC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4691 3 -     11706 GTC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8429 3 -     30655 GTC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34742 3 +     46564 GTC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95021 3 -     98465 GTC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8660 3 +     35169 GTC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37793 3 +     52041 ATC
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52498 3 -     66298 CTC
i Pteronotus_parnellii.KE847780.1                        I 26 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5012 3 -     18639 GTC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841088 2 -  28871421 -TC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537603 2 -   4952924 -TC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099466 3 +  38429054 CTC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27597 3 +     91421 GTC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154081 3 -   7812017 GTC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8454 3 +     72585 GTC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53532 3 +     55069 ATC
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023076 3 -  90668790 GTC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915066 3 +   3329780 ATC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2175 3 +      7119 GTC
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122791 3 + 195417433 GTC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237017 3 -   7961872 GTC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75132 3 -    116970 GTC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4337 3 +     27962 GTC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4231 3 +      6077 GTC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4321 3 +      5971 GTC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4242 3 +      5932 GTC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2584 3 -      4390 GTC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392021 3 - 209938924 GTC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4191 3 +      5979 GTC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                760 3 -     22275 GTC
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8208 3 +     16473 ATC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109356 3 + 121099817 GTC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30923 3 -     47369 GTC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31309 3 -     79414 GTC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28000 3 -     34454 GTC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15401 3 -     22428 GTC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30555 3 -     47109 GTC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238601 3 +   5703754 GTC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8191 3 +     21866 GTC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116244 3 +    313613 GTC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 23 C 0
s Semnopithecus_entellus.k141_158471                         25916 3 +     27374 GTC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29428 3 +     58920 GTC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15926 3 -     45317 GTC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23584 3 -     42441 GTC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26262 3 -     29113 GTC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29337 3 -     48123 GTC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49564 3 +     77746 GTT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864527 3 -   1910179 GTC
i Solenodon_paradoxus.SolPar_flattened_line_126          I 23 C 0
s Sorex_araneus.JH798187.1                                 4671657 3 +  18376816 GTC
i Sorex_araneus.JH798187.1                               I 30 C 0
s Spermophilus_dauricus.KZ294078.1                         1868716 3 +   3870691 GTC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7096 3 -     97271 GTC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125244 3 +    196729 GTC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644115 3 +  69701581 TTC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391524 3 +   1523678 GTC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14663 3 +     22964 GTC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3083 3 +      5583 CTC
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 2 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191969 3 +    199430 GTC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105939 3 -    539355 GTC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1003 3 +      9917 GTC
i Tarsius_lariang.k141_1733899                           I 16 C 0
s Tarsius_wallacei.k141_226975                                7801 3 +     20590 GTC
i Tarsius_wallacei.k141_226975                           I 16 C 0
s Theropithecus_gelada.CM009954.1                           353776 3 - 186847797 GTC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24443 3 -     33621 GTC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480492 3 -    610378 GTC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21461 3 +     26378 GTC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34137 3 -     78344 GTC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20786 3 +     25722 GTC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29093 3 -     62838 GTC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29137 3 +     46913 GTC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9946 3 -     28527 GTC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31028 3 -     64340 GTC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29066 3 -     63452 GTC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10513 3 +     22490 GTC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3936 3 -      6147 GTC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10849 3 -     13050 GTC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256079 3 -   6242583 GTC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2107 3 +     19340 GTC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173820 3 -    200418 GTC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480804 3 -  10818551 TTC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834746 3 -   4065304 GTC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8768 3 -     70247 GTC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366066 3 -  33153633 GTC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3981 3 -     21056 GTG
i Uropsilus_gracilis.UroGra_scaffold_46687               I 19 C 0
s Ursus_maritimus.KK499267.1                                182183 3 +   5085361 GTC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25597 3 -     30710 GTC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24504 3 -    147434 GTC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76648 3 +   5488506 GCC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105318 3 -    112863 GTC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174511 3 -    224448 GTC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29222 3 -     86975 TTC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1355 3 +      2126 GTC
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Echinops_telfairi.JH980293.1                            62855344 1 - 111700974 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   20118 18 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2110378 18 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13026 18 -     19938 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Zapus_hudsonius.ZapHud_scaffold_286923                       349 0 -      1899 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5817 1 +     36723 T
s Acinonyx_jubatus.LLWD01001279.1                           813211 1 +   1699592 T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25459 1 +     63021 T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415672 1 +  29979442 T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216007 1 +    347723 T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18423 1 -     61208 T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   48455 1 +     53615 T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           486 1 +     13857 T
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17036 1 -     21945 T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18722 1 +     32033 T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72546 1 -     84148 T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44785 1 -     78289 T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44224 1 +     55831 T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42674 1 -     64179 T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24308 1 -     24835 T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41299 1 +     45454 T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46948 1 +     70886 T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9121 1 +     30854 T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33255 1 +     42133 T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585656 1 +   2318259 T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177458 1 -    412891 T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50762 1 -     68529 T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1512 1 +     17741 T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2137 1 -     15923 T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672419 1 +   5030052 T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2413 1 -     16391 T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1972 1 -     17186 T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16492 1 -     32367 T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19882 1 -     45910 G
i Arctocebus_calabarensis.k141_1364444                   I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5724 1 -     15198 T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275009 1 +  21539123 T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11177 1 +     48076 T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6312 1 -     28759 T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33866 1 +     44353 T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49237 1 -     71267 T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23295 1 -     33135 T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6564 1 +     11645 T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6572 1 -     19611 T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963805 1 -  23207421 T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          305 1 -     25979 T
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86664 1 +    124022 T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22198 1 +    288883 T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356590 1 +  48749331 T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755154 1 +   1948126 T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545296 1 -  45695690 T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530317 1 -   4408762 T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8186 1 +     28062 T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43480 1 -     91139 T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21006 1 +     95584 T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20919 1 +    119600 T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10492 1 +     18648 T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10027 1 -     13885 T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2097 1 -      8861 T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454489 1 + 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2012 1 +      8664 T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631318 1 +  17673402 T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665604 1 +   7040546 T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209264 1 +   1652518 T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505690 1 +  60362399 T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9326 1 -     23171 T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222669 1 +   9314153 T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615804 1 +  59632846 T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107385 1 -  63665305 T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409385 1 -  46296322 T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591659 1 +  44709034 T
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1846 1 -      1880 T
i Capromys_pilorides.CapPil_scaffold_652123              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270773 1 +    496798 A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                580 1 +      9923 T
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27977 1 -     39886 T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79859 1 -    217609 T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996725 1 +  23392119 T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000166 1 +  23407841 T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63247 1 -     66877 T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5410 1 -     12580 T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43468 1 +     53515 T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371396 1 -  26074798 T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8285 1 -     34880 T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67380 1 -     89041 T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2733 1 -      5494 A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492493 1 -  27778364 T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19326 1 +     27315 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141611 1 -   4669795 T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45354 1 +     47900 T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            783 1 -     14410 T
i Cercocebus_lunulatus.k141_2500334                      I 325 C 0
s Cercocebus_torquatus.k141_2159127                          45167 1 -    148725 T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27369 1 -     40656 T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7333 1 +     20796 T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12451 1 -     17524 T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28178 1 -     34525 T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11954 1 -     25376 T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364548 1 -  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270268 1 +  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32636 1 -     45857 T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27537 1 -     32606 T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3699 1 +      8499 T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26095 1 +     70610 T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23063 1 +     36323 T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             30937 1 -     33796 T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5454 1 -     15404 T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9286 1 -     32913 G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19699 1 -     40346 G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19954 1 +    216457 G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19747 1 +     39636 G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239081 1 -   2543920 T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4342 1 +      5346 T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42817 1 -    112038 T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8388 1 +     34062 T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343957 1 +  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10505 1 -     44032 C
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305282 1 - 135778131 T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1119 1 +      2406 T
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 I 6
s Colobus_angolensis.KN981557.1                             409687 1 -   2368649 T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379568 1 - 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3125 1 -     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807555 1 +  53390261 T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3086 1 -      8242 T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44600 1 -     83289 T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115169 1 - 224834208 T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9720 1 +     12657 T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4663 1 +     87169 T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645287 1 -   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18641 1 +     50838 T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4642 1 +     36344 T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28418 1 +     75252 T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292873 1 +  12879189 T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632213 1 -  35494412 T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330776 1 -   2620052 T
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664777 1 -   1390856 T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139570 1 -    198055 T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99169 1 -    115145 T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950803 1 -  37912305 A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5728 1 -     10735 A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6550 1 +     19438 T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240025 1 -    607251 T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9109076 1 -  10337057 a
i Elephantulus_edwardii.JH947257.1                       C 0 I 93
s Ellobius_lutescens.LOEQ01008920.1                          31317 1 +    110024 T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13288 1 +     18970 T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916420 1 +  41312741 T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579195 1 +  14770903 T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041655 1 -   4378816 T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375593 1 +  39960074 T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             974 1 -      1194 T
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666360 1 +   7059049 T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263495 1 +  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71422 1 -    133382 T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202              966 1 -      1170 T
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               15086 1 -     24895 T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42796 1 -     70999 T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86766 1 +    112731 T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43329 1 +     68309 T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53653 1 -     65740 T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24285 1 -     75513 T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48480 1 -     97555 T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5204 1 +     30972 T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42924 1 -     52037 T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59327 1 -    111500 T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247120 1 - 206538554 T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116906 1 - 205367284 T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28003 1 -     30238 T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916723 1 -   3816255 T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     125332 1 -    137831 G
i Galago_moholi.ctg3793                                  I 3 C 0
s Galago_senegalensis.k141_991736                             8877 1 +     22493 G
i Galago_senegalensis.k141_991736                        I 3 C 0
s Galagoides_demidoff.k141_561628                            20948 1 -     32986 G
i Galagoides_demidoff.k141_561628                        I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1465 1 -     28519 T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91728 1 -     95226 T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34792 1 -     36801 T
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6117 1 -      8343 T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255132 1 - 186649187 T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2288 1 -     78134 T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15011 1 -     40692 T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36413 1 +     49394 T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61281 1 -     66874 T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10155 1 -     42923 T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17154 1 -     53142 T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31096 1 -    327341 T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9403 1 +     48891 T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932699 1 -  22651954 T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                1354 1 +      4291 T
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7926 1 -     36432 T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551907 1 -   1711038 T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1346 1 -      2730 T
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143141 1 -    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70260 1 +     83186 T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72162 1 +    143317 T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6175 1 +     12352 T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13359 1 +     55766 T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052959 1 + 191637585 T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801837 1 +  11177569 T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4805 1 -    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387140 1 +   7955117 T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2708 1 +     11955 T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10314 1 -     16823 T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240182 1 +   9596543 T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72157 1 -     97402 T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43562 1 +    110728 T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63166 1 -     65777 T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14759804 1 +  30322482 T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4476 1 -     13097 T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4230 1 +      5940 T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4060 1 -      5717 T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10432 1 -     11567 T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11813 1 -     12945 T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9314 1 +     29618 T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9310 1 +     31569 T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9320 1 +     24756 T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9320 1 +     16388 T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813797 1 -   3914936 T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18171 1 +     24238 T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341499 1 +    662738 T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334496 1 -   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10898 1 +     19643 G
i Loris_lydekkerianus.k141_2031736                       I 3 C 0
s Loris_tardigradus.ctg83                                  5044561 1 -   6120653 G
i Loris_tardigradus.ctg83                                I 3 C 0
s Loxodonta_africana.GL010049.1                           39081989 1 +  43346337 t
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41614959 1 +  59628241 T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45891 1 -     61512 T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373553 1 -  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25815 1 +     30207 T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             653 1 -      5035 T
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25768 1 +     30527 T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36944 1 -     50087 T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46688 1 +     51645 T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415891 1 - 187317192 T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400121 1 +  25927173 T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49293 1 -     62418 T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1830 1 +     14901 T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45765 1 +     59329 T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271673 1 +    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   317 1 -      5049 T
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3471 1 +     17132 T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223520 1 -    270270 T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322961 1 +  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357792 1 -    752769 T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673847 1 -    737560 T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221143 1 +    317179 T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501359 1 +  40650429 T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150692 1 +    207569 T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26566 1 -     74585 T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50453 1 -    140813 T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429553 1 +  29670104 T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87783 1 +     93471 T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10599 1 +     17804 T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11099 1 -     12984 T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19415 1 -     26561 T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985150 1 +  93316391 T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46480 1 +    145209 T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 8
s Micronycteris_hirsuta.MicHir_scaffold_2233                185380 1 +    200668 T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962757 1 +  27267610 T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363543 1 -   8254450 T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42450 1 -     48117 T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22995 1 -     27822 T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8808 1 +     27589 T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52937 1 -     62432 t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359888 1 +    437263 T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179608 1 +    366855 T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25850 1 -     82753 T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18847 1 -     63510 T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39508 1 +     47283 T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593477 1 + 120012414 T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687863 1 + 129401213 T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497156 1 + 130317789 T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83844 1 -     86153 T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355442 1 +  14710649 T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63426 1 +     67721 T
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793796 1 +  10118263 T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387927 1 +   6019432 T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383755 1 +   4330536 T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2564 1 +     18357 T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             946600 1 +   3037898 T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29644 1 +     34575 T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232566 1 -   7148211 T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128576 1 -    149072 t
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54067 1 -    132029 T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10162 1 -     16345 T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16047 1 +     22201 T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414268 1 -  22158432 T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26445 1 -     54323 T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198555 1 +   9404916 T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636926 1 + 196305487 A
i Nycticebus_bengalensis.LG01                            I 3 C 0
s Nycticebus_coucang.k141_3846325                             3680 1 -      3937 A
i Nycticebus_coucang.k141_3846325                        I 3 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93565185 1 - 199412804 G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 3 C 0
s Ochotona_princeps.JH802162.1                             2557231 1 -   3988456 T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055379 1 -  11899542 T
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452017 1 +   2017862 T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436618 1 -    630418 T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14611 1 +    150152 T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93114 1 -    140218 T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3992 1 -     41509 t
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8102956 1 +  10937097 T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_1597630               103 1 -       378 T
i Orycteropus_afer.OryAfe_flattened_line_1597630         C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103965 1 - 174332312 T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39600 1 +    559221 T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40479 1 -     51505 G
i Otolemur_crassicaudatus.k141_649260                    I 3 C 0
s Otolemur_garnettii.GL873799.1                             353482 1 +   1103335 G
i Otolemur_garnettii.GL873799.1                          I 3 C 0
s Ovis_aries.CM001607.2                                   26404523 1 -  44047080 T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5042 1 +     17875 T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473161 1 - 189151597 T
i Pan_troglodytes.CM009242.2                             C 0 I 13
s Panthera_onca.PanOnc_flattened_line_3271                   24826 1 -    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462152 1 -  18783137 T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972811 1 +   8748460 T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616051 1 +   2937107 T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243793 1 - 183742232 T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10255 1 +     21308 T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292828 1 -  20919399 T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22903 1 -     27687 T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16049 1 +     16796 T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22860 1 -     23640 T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15423 1 +     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26677 1 +     31479 G
i Perodicticus_ibeanus.k141_1921260                      I 3 C 0
s Perodicticus_potto.k141_1854441                            19047 1 -     24908 G
i Perodicticus_potto.k141_1854441                        I 3 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2144 1 +      9367 A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247189 1 +  18517816 T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32287 1 -     56120 T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4482 1 -     63832 T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3079 1 +     55023 T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2617 1 -     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3207 1 +     40849 T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254881 1 +  14605196 T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4103 1 +     22231 T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65184 1 +    207309 T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6276 1 -     25401 T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32020 1 +     58159 T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32296 1 +     63561 T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32056 1 +     51148 T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557026 1 -   4542175 T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32040 1 +     51125 T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1480 1 +     19503 T
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8451 1 +     39866 C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3533 1 -      9282 C
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42937 1 -     87950 C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43333 1 -     88961 C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8029 1 -     39403 C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42980 1 +     87928 C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8028 1 -     60166 C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14965 1 -     67232 C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42881 1 -     90634 C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44348 1 +     89403 C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178270 1 - 189387572 T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193087 1 -   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28224 1 +     69807 T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45405 1 -     80239 T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 1179 1 +      7663 T
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1982952 1 +   4620579 T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566459 1 -   2598838 T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4097 1 -      7103 T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4694 1 -     11706 T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8432 1 -     30655 T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34745 1 +     46564 T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95024 1 -     98465 T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8663 1 +     35169 T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37796 1 +     52041 T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52501 1 -     66298 T
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5015 1 -     18639 T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841090 1 -  28871421 T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537605 1 -   4952924 T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099469 1 +  38429054 T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27600 1 +     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154084 1 -   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8457 1 +     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53535 1 +     55069 T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023079 1 -  90668790 T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915069 1 +   3329780 T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2178 1 +      7119 T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122794 1 + 195417433 T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237020 1 -   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75135 1 -    116970 T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4340 1 +     27962 T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4234 1 +      6077 T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4324 1 +      5971 T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4245 1 +      5932 T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2587 1 -      4390 T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392024 1 - 209938924 T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4194 1 +      5979 T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                763 1 -     22275 T
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8211 1 +     16473 T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109359 1 + 121099817 T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30926 1 -     47369 T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31312 1 -     79414 T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28003 1 -     34454 T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15404 1 -     22428 T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30558 1 -     47109 T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238604 1 +   5703754 T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8194 1 +     21866 T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116247 1 +    313613 T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25919 1 +     27374 T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29431 1 +     58920 T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15929 1 -     45317 T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23587 1 -     42441 T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26265 1 -     29113 T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29340 1 -     48123 T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49567 1 +     77746 T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864530 1 -   1910179 T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671660 1 +  18376816 T
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868719 1 +   3870691 T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7099 1 -     97271 T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125247 1 +    196729 T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644118 1 +  69701581 T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391527 1 +   1523678 T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14666 1 +     22964 T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191972 1 +    199430 T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105942 1 -    539355 T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1006 1 +      9917 A
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7804 1 +     20590 A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353779 1 - 186847797 T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24446 1 -     33621 T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480495 1 -    610378 T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21464 1 +     26378 T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34140 1 -     78344 T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20789 1 +     25722 T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29096 1 -     62838 T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29140 1 +     46913 T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9949 1 -     28527 T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31031 1 -     64340 T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29069 1 -     63452 T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10516 1 +     22490 T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3939 1 -      6147 T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10852 1 -     13050 T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256082 1 -   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2110 1 +     19340 T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173823 1 -    200418 T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480807 1 -  10818551 T
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834749 1 -   4065304 T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8771 1 -     70247 T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366069 1 -  33153633 T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3984 1 -     21056 T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182186 1 +   5085361 T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25600 1 -     30710 T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24507 1 -    147434 T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76651 1 +   5488506 T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105321 1 -    112863 T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174514 1 -    224448 T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29225 1 -     86975 T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1358 1 +      2126 T
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Echinops_telfairi.JH980293.1                            62855344 1 - 111700974 I
e Choloepus_hoffmanni.KN194906.1                            606705 0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_70559                 15130 0 +     15858 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   20118 18 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2110378 18 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13026 18 -     19938 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Zapus_hudsonius.ZapHud_scaffold_286923                       349 0 -      1899 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                3086 0 +      5583 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120095 0 +    130748 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5818 2 +     36723 C---T
s Acinonyx_jubatus.LLWD01001279.1                           813212 2 +   1699592 T---T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25460 2 +     63021 C---T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415673 2 +  29979442 T---T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216008 2 +    347723 T---T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18425 1 -     61208 ----T
i Allactaga_bullata.AllBul_scaffold_20030                I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48456 2 +     53615 C---T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           487 2 +     13857 C---T
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17037 2 -     21945 C---T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18723 2 +     32033 C---T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72547 2 -     84148 C---T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44786 2 -     78289 C---T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44225 2 +     55831 C---T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42675 2 -     64179 C---T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24309 2 -     24835 C---T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41300 2 +     45454 C---T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46949 2 +     70886 C---T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9122 2 +     30854 C---T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33256 2 +     42133 C---T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585657 2 +   2318259 T---T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177459 2 -    412891 T---C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50763 2 -     68529 T---T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1513 2 +     17741 C---T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2138 2 -     15923 C---T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672420 2 +   5030052 C---T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2414 2 -     16391 C---T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               1973 2 -     17186 C---T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16493 2 -     32367 T---G
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       19883 2 -     45910 T---T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5725 2 -     15198 T---C
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275010 2 +  21539123 C---T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11178 2 +     48076 C---T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6313 2 -     28759 C---T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33867 2 +     44353 C---T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49238 2 -     71267 C---T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23296 2 -     33135 C---T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6565 2 +     11645 C---T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6573 2 -     19611 C---T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963806 2 -  23207421 T---T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          306 2 -     25979 T---T
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86665 2 +    124022 T---T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22199 2 +    288883 T---T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356591 2 +  48749331 T---T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755155 2 +   1948126 T---T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545297 2 -  45695690 T---T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530318 2 -   4408762 T---T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8187 2 +     28062 C---T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43481 2 -     91139 C---T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21007 2 +     95584 C---T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20920 2 +    119600 C---T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10493 2 +     18648 C---T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10028 2 -     13885 C---T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2098 2 -      8861 C---T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454490 2 + 189096842 C---T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2013 2 +      8664 C---T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631319 2 +  17673402 T---T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665605 2 +   7040546 T---T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209265 2 +   1652518 T---T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505691 2 +  60362399 T---T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9327 2 -     23171 T---T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222670 2 +   9314153 T---T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615805 2 +  59632846 T---T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107386 2 -  63665305 T---T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409386 2 -  46296322 T---T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591660 2 +  44709034 T---T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270774 2 +    496798 C---T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                581 2 +      9923 T---C
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    27978 2 -     39886 C---T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79860 2 -    217609 T---T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996726 2 +  23392119 C---T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000167 2 +  23407841 C---T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63248 2 -     66877 C---T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5411 2 -     12580 C---T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43469 2 +     53515 C---T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371397 2 -  26074798 C---T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8286 2 -     34880 C---T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67381 2 -     89041 C---T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2734 2 -      5494 C---T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492494 2 -  27778364 T---T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19327 2 +     27315 T---T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141612 2 -   4669795 C---T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45355 2 +     47900 C---T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            784 2 -     14410 C---T
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45168 2 -    148725 C---T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27370 2 -     40656 C---T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7334 2 +     20796 C---T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12452 2 -     17524 C---T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28179 2 -     34525 C---T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11955 2 -     25376 C---T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364549 2 -  39242232 C---T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270269 2 +  21565898 C---T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32637 2 -     45857 C---T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27538 2 -     32606 C---T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3700 2 +      8499 C---T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26096 2 +     70610 C---T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23064 2 +     36323 C---T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             30938 2 -     33796 C---T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5455 2 -     15404 C---T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9287 2 -     32913 C---T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19700 2 -     40346 C---T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19955 2 +    216457 C---T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19748 2 +     39636 C---T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239082 2 -   2543920 C---C
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4343 2 +      5346 C---T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42818 2 -    112038 C---T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8389 2 +     34062 C---T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343958 2 +  18827391 C---T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10506 2 -     44032 C---T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305283 2 - 135778131 C---T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15130 1 +     15858 ----T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606705 1 -    839153 ----T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_1700486               729 2 +       798 T---G
i Chrysochloris_asiatica.ChrAsi_scaffold_1700486         I 26 n 6
s Colobus_angolensis.KN981557.1                             409688 2 -   2368649 C---T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379569 2 - 200372422 C---T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3126 2 -     84244 C---T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807556 2 +  53390261 T---T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3087 2 -      8242 T---T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44601 2 -     83289 C---T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115170 2 - 224834208 T---T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9721 2 +     12657 T---T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4664 2 +     87169 T---T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645288 2 -   1526836 C---T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4643 2 +     36344 C---T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28419 2 +     75252 C---T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292874 2 +  12879189 C---T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632214 2 -  35494412 T---T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330777 2 -   2620052 T---C
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664778 2 -   1390856 T---T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139571 2 -    198055 T---T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99170 2 -    115145 C---C
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950804 2 -  37912305 T---T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5729 2 -     10735 T---T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6551 2 +     19438 T---T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240026 2 -    607251 T---T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9109170 2 -  10337057 T---G
i Elephantulus_edwardii.JH947257.1                       I 93 I 24
s Ellobius_lutescens.LOEQ01008920.1                          31318 2 +    110024 C---T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13289 2 +     18970 C---T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916421 2 +  41312741 T---T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579196 2 +  14770903 T---C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041656 2 -   4378816 T---T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375594 2 +  39960074 T---T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                             975 2 -      1194 T---T
i Equus_przewalskii.ATBW01110277.1                       C 0 I 29
s Erinaceus_europaeus.JH835339.1                           3666361 2 +   7059049 T---T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263496 2 +  21539334 C---T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71423 2 -    133382 T---T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202              967 2 -      1170 T---T
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               15087 2 -     24895 C---T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42797 2 -     70999 C---T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86767 2 +    112731 C---T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43330 2 +     68309 C---T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53654 2 -     65740 C---T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24286 2 -     75513 C---T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48481 2 -     97555 C---T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5205 2 +     30972 C---T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42925 2 -     52037 C---T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59328 2 -    111500 C---T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247121 2 - 206538554 T---T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116907 2 - 205367284 T---T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28004 2 -     30238 T---T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916724 2 -   3816255 C---T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     125333 2 -    137831 T---T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             8878 2 +     22493 T---T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            20949 2 -     32986 T---T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1466 2 -     28519 C---T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91729 2 -     95226 T---T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34793 2 -     36801 C---T
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6118 2 -      8343 C---T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255133 2 - 186649187 C---T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2289 2 -     78134 T---T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15012 2 -     40692 C---T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36414 2 +     49394 C---T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61282 2 -     66874 C---T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10156 2 -     42923 C---T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17155 2 -     53142 C---T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31097 2 -    327341 T---T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9404 2 +     48891 T---T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932700 2 -  22651954 C---T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                1355 2 +      4291 T---C
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 I 4
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7927 2 -     36432 T---T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551908 2 -   1711038 T---T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1347 2 -      2730 T---T
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143142 2 -    630532 C---T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70261 2 +     83186 T---T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72163 2 +    143317 C---T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6176 2 +     12352 C---T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13360 2 +     55766 C---T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052960 2 + 191637585 C---T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801838 2 +  11177569 C---T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       4806 2 -    135385 C---T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 2641
s Ictidomys_tridecemlineatus.JH393364.1                     387141 2 +   7955117 C---T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2709 2 +     11955 T---T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10315 2 -     16823 T---T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240183 1 +   9596543 ----T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72158 2 -     97402 T---T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43563 2 +    110728 C---T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63167 2 -     65777 T---C
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14759805 2 +  30322482 C---T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4477 2 -     13097 C---T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4231 2 +      5940 C---T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4061 2 -      5717 C---T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10433 2 -     11567 C---T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11814 2 -     12945 C---T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9315 2 +     29618 C---T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9311 2 +     31569 C---T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9321 2 +     24756 C---T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9321 2 +     16388 C---T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813798 2 -   3914936 T---T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18172 2 +     24238 T---T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341500 2 +    662738 T---T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334497 2 -   1826925 C---T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10899 2 +     19643 T---T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5044562 2 -   6120653 T---T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39081990 2 +  43346337 t---t
i Loxodonta_africana.GL010049.1                          C 0 I 4
s Lycaon_pictus.CM007581.1                                41614960 2 +  59628241 T---T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45892 2 -     61512 C---T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373554 2 -  60120075 C---T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25816 2 +     30207 C---T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             654 2 -      5035 C---T
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25769 2 +     30527 C---T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36945 2 -     50087 C---T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46689 2 +     51645 C---T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415892 2 - 187317192 C---T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400122 2 +  25927173 C---T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49294 2 -     62418 C---T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1831 2 +     14901 C---T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45766 2 +     59329 C---T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271674 2 +    668171 C---T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   318 2 -      5049 C---T
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3472 2 +     17132 C---T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223521 2 -    270270 T---T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322962 2 +  24302211 C---T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357793 2 -    752769 C---T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673848 2 -    737560 T---T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221144 2 +    317179 T---T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501360 2 +  40650429 C---T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150693 2 +    207569 T---T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50454 2 -    140813 C---T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429554 2 +  29670104 C---T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87784 2 +     93471 T---T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10600 2 +     17804 C---T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11100 2 -     12984 C---T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19416 2 -     26561 C---T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985151 2 +  93316391 G---T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185381 2 +    200668 G---C
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962758 2 +  27267610 C---T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363544 2 -   8254450 T---C
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42451 2 -     48117 T---C
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         22996 2 -     27822 C---T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8809 2 +     27589 T---T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     52938 2 -     62432 c---t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359889 2 +    437263 T---T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179609 2 +    366855 T---C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25851 2 -     82753 T---T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18848 2 -     63510 T---T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39509 2 +     47283 T---C
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593478 2 + 120012414 C---T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687864 2 + 129401213 C---T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497157 2 + 130317789 C---T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83845 2 -     86153 C---T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355443 2 +  14710649 T---T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9793797 2 +  10118263 T---C
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4387928 2 +   6019432 T---C
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383756 2 +   4330536 T---C
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2565 2 +     18357 T---C
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120095 1 +    130748 ----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946601 2 +   3037898 C---T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29645 2 +     34575 C---T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232567 2 -   7148211 T---T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128577 2 -    149072 t---c
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54068 2 -    132029 C---T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10163 2 -     16345 C---T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16048 2 +     22201 C---T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414269 2 -  22158432 C---T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26446 2 -     54323 C---T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198556 2 +   9404916 T---T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93636927 2 + 196305487 T---T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_3846325                             3681 2 -      3937 T---T
i Nycticebus_coucang.k141_3846325                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93565186 2 - 199412804 T---T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557232 2 -   3988456 T---C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452018 2 +   2017862 T---T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436619 2 -    630418 T---T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14612 2 +    150152 T---T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93115 2 -    140218 C---T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    3993 2 -     41509 c---t
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8102957 2 +  10937097 T---T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_1597630               104 2 -       378 T---T
i Orycteropus_afer.OryAfe_flattened_line_1597630         C 0 I 7
s Oryctolagus_cuniculus.CM000791.1                       107103966 2 - 174332312 T---T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39601 2 +    559221 T---T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        40480 2 -     51505 T---T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             353483 2 +   1103335 T---T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404524 2 -  44047080 T---T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5043 2 +     17875 T---T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             12791 5 -     26668 CACAT
i Pan_troglodytes.NBAG03003091.1                         I 128 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24827 2 -    230217 T---T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462153 2 -  18783137 T---T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972812 2 +   8748460 T---T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616052 2 +   2937107 T---T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243794 2 - 183742232 C---T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10256 2 +     21308 C---T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292829 2 -  20919399 C---T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22904 2 -     27687 C---T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16050 2 +     16796 C---T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22861 2 -     23640 C---T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15424 2 +     78924 T---T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          26678 2 +     31479 T---A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            19048 2 -     24908 T---A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2145 2 +      9367 T---T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247190 2 +  18517816 C---T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32288 2 -     56120 C---T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4483 2 -     63832 T---T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3080 2 +     55023 C---T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2618 2 -     89929 C---T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3208 2 +     40849 C---T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254882 2 +  14605196 C---T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4104 2 +     22231 T---C
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65185 2 +    207309 C---T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6277 2 -     25401 C---T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32021 2 +     58159 C---T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32297 2 +     63561 C---T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32057 2 +     51148 C---T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557027 2 -   4542175 C---T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32041 2 +     51125 C---T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1481 2 +     19503 T---T
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8452 2 +     39866 C---T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3534 2 -      9282 C---T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42938 2 -     87950 C---T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43334 2 -     88961 C---T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8030 2 -     39403 C---T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          42981 2 +     87928 C---T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8029 2 -     60166 C---T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14966 2 -     67232 C---T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42882 2 -     90634 C---T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44349 2 +     89403 C---T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178271 2 - 189387572 C---T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193088 2 -   9816681 C---T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28225 2 +     69807 C---T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45406 2 -     80239 C---T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 1180 2 +      7663 T---C
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 4
s Prolemur_simus.MPIZ01000396.1                            1982953 2 +   4620579 C---T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566460 2 -   2598838 C---T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4098 2 -      7103 C---T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4695 2 -     11706 C---T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8433 2 -     30655 C---T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34746 2 +     46564 C---T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95025 2 -     98465 C---T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8664 2 +     35169 C---T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37797 2 +     52041 C---T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52502 2 -     66298 T---C
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5016 2 -     18639 T---T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841091 2 -  28871421 T---T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537606 2 -   4952924 T---T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099470 2 +  38429054 T---T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27601 2 +     91421 C---T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154085 2 -   7812017 C---T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8458 2 +     72585 C---T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53536 2 +     55069 T---T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023080 2 -  90668790 G---T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915070 2 +   3329780 T---T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2179 2 +      7119 C---T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122795 2 + 195417433 C---T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237021 2 -   7961872 C---T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75136 2 -    116970 T---T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4341 2 +     27962 C---T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4235 2 +      6077 C---T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4325 2 +      5971 C---T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4246 2 +      5932 C---T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2588 2 -      4390 C---T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392025 2 - 209938924 C---T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4195 2 +      5979 C---T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                764 2 -     22275 C---T
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8212 2 +     16473 T---T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109360 2 + 121099817 C---T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30927 2 -     47369 C---T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31313 2 -     79414 C---T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28004 2 -     34454 C---T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15405 2 -     22428 C---T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30559 2 -     47109 C---T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238605 2 +   5703754 C---T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8195 2 +     21866 C---T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116248 2 +    313613 T---T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25920 2 +     27374 C---T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29432 2 +     58920 C---T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15930 2 -     45317 C---T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23588 2 -     42441 C---T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26266 2 -     29113 C---T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29341 2 -     48123 C---T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49568 2 +     77746 C---T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864531 2 -   1910179 T---T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868720 2 +   3870691 C---T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7100 2 -     97271 T---T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125248 2 +    196729 T---T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644119 2 +  69701581 T---T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391528 2 +   1523678 C---T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14667 2 +     22964 T---C
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3086 1 +      5583 ----T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      191973 2 +    199430 T---T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105943 2 -    539355 T---T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1007 2 +      9917 C---T
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7805 2 +     20590 C---T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353780 2 - 186847797 C---T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24447 2 -     33621 C---T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480496 2 -    610378 T---C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21465 2 +     26378 C---T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34141 2 -     78344 C---T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20790 2 +     25722 C---T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29097 2 -     62838 C---T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29141 2 +     46913 C---T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9950 2 -     28527 C---T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31032 2 -     64340 C---T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29070 2 -     63452 C---T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10517 2 +     22490 C---T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3940 2 -      6147 C---T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10853 2 -     13050 C---T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256083 2 -   6242583 C---T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2111 2 +     19340 C---T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173824 2 -    200418 T---T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480808 2 -  10818551 T---T
i Trichechus_manatus.JH594705.1                          C 0 I 4
s Tupaia_chinensis.KB320699.1                              1834750 2 -   4065304 T---T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8772 2 -     70247 T---T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366070 2 -  33153633 T---T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    3985 2 -     21056 T---T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182187 2 +   5085361 T---T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25601 2 -     30710 C---T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24508 2 -    147434 C---T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76652 2 +   5488506 T---T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105322 2 -    112863 T---T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174515 2 -    224448 C---T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29226 2 -     86975 T---T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1359 2 +      2126 T---A
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Myocastor_coypus.MyoCoy_scaffold_15261                     63427 0 +     67721 C
e Sorex_araneus.JH798187.1                                 4671661 0 +  18376816 C
e Capromys_pilorides.CapPil_scaffold_652123                   1847 0 -      1880 C
e Octodon_degus.JH651603.1                                11055380 0 -  11899542 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  18642 0 +     50838 C
e Microgale_talazaci.MicTal_scaffold_6613                    46481 8 +    145209 I
e Echinops_telfairi.JH980293.1                            62855344 1 - 111700974 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   20118 18 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2110378 18 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13026 18 -     19938 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mellivora_capensis.MelCap_flattened_line_19308             26567 0 -     74585 C
e Zapus_hudsonius.ZapHud_scaffold_286923                       349 0 -      1899 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5820 11 +     36723 CTTCCAATA-T------T
s Acinonyx_jubatus.LLWD01001279.1                           813214 11 +   1699592 GATCTAGTT-T------T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 19
s Acomys_cahirinus.AcoCah_scaffold_21377                     25462  9 +     63021 TAACTAATC---------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 18
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415675 11 +  29979442 CATCTAGTT-G------C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 19
s Ailurus_fulgens.LNAC01001112.1                            216010 11 +    347723 CGTCTAGTT-G------C
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 20
s Allactaga_bullata.AllBul_scaffold_20030                    18426 11 -     61208 TAACTAATG-C------C
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 19
s Allenopithecus_nigroviridis.k141_3755588                   48458 11 +     53615 CATCTAATA-T------T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           489 11 +     13857 CATCTAATA-T------T
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17039 12 -     21945 CATCTAATAAT------T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18725 11 +     32033 CATCTAATA-T------T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72549 11 -     84148 CATCTAATA-T------T
i Alouatta_belzebul.k141_1011583                         C 0 I 19
s Alouatta_caraya.k141_1109140                               44788 11 -     78289 CATCTAATA-T------T
i Alouatta_caraya.k141_1109140                           C 0 I 19
s Alouatta_discolor.k141_2561099                             44227 11 +     55831 CATCTAATA-T------T
i Alouatta_discolor.k141_2561099                         C 0 I 19
s Alouatta_juara.k141_1687208                                42677 11 -     64179 CATCTAATA-T------T
i Alouatta_juara.k141_1687208                            C 0 I 19
s Alouatta_macconnelli.k141_361275                           24311 11 -     24835 CATCTAATA-T------T
i Alouatta_macconnelli.k141_361275                       C 0 I 19
s Alouatta_nigerrima.k141_376068                             41302 11 +     45454 CATCTAATA-T------T
i Alouatta_nigerrima.k141_376068                         C 0 I 19
s Alouatta_palliata.k141_638677                              46951 11 +     70886 CATCTAATA-T------T
i Alouatta_palliata.k141_638677                          C 0 I 19
s Alouatta_puruensis.k141_251022                              9124 11 +     30854 CATCTAATA-T------T
i Alouatta_puruensis.k141_251022                         C 0 I 19
s Alouatta_seniculus.k141_928287                             33258 11 +     42133 CATCTAATA-T------T
i Alouatta_seniculus.k141_928287                         C 0 I 19
s Ammotragus_lervia.NIVO01071767.1                         1585659 11 +   2318259 TATCTAATT-T------C
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 19
s Anoura_caudifer.AnoCau_scaffold_1412                      177461 11 -    412891 CATCTAGTG-T------T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 19
s Antilocapra_americana.AntAmePen_scaffold_21030             50765 11 -     68529 TATCTAATT-T------C
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 19
s Aotus_azarae.k141_887050                                    1515 11 +     17741 CATTTAATA-T------T
i Aotus_azarae.k141_887050                               C 0 I 19
s Aotus_griseimembra.k141_3192254                             2140 11 -     15923 CATTTAATA-T------T
i Aotus_griseimembra.k141_3192254                        C 0 I 19
s Aotus_nancymaae.KZ198451.1                                672422 11 +   5030052 CATTTAATA-T------T
i Aotus_nancymaae.KZ198451.1                             C 0 I 19
s Aotus_trivirgatus.k141_318729                               2416 11 -     16391 CATTTAATA-T------T
i Aotus_trivirgatus.k141_318729                          C 0 I 19
s Aotus_vociferans.k141_1514463                               1975 11 -     17186 CATTTAATA-T------T
i Aotus_vociferans.k141_1514463                          C 0 I 19
s Aplodontia_rufa.AprRuf_scaffold_46868                      16495 11 -     32367 CAACTAATG-T------T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 19
s Arctocebus_calabarensis.k141_1364444                       19885 11 -     45910 AATCTAATG-T------G
i Arctocebus_calabarensis.k141_1364444                   C 0 I 732
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5727 11 -     15198 CATCTAGTG-T------T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 19
s Ateles_geoffroyi_b.tarseq_1536                               275012 11 +  21539123 CATCTAATA-T------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 19
s Ateles_belzebuth.k141_1572163                              11180 11 +     48076 CATCTAATA-T------T
i Ateles_belzebuth.k141_1572163                          C 0 I 19
s Ateles_chamek.k141_615173                                   6315 11 -     28759 CATCTAATA-T------T
i Ateles_chamek.k141_615173                              C 0 I 19
s Ateles_geoffroyi_a.k141_1283730                              33869 11 +     44353 CATCTAATA-T------T
i Ateles_geoffroyi_a.k141_1283730                          C 0 I 19
s Ateles_marginatus.k141_970259                              49240 11 -     71267 CATCTAATA-T------T
i Ateles_marginatus.k141_970259                          C 0 I 19
s Ateles_paniscus.k141_866194                                23298 11 -     33135 CATCTAATA-T------T
i Ateles_paniscus.k141_866194                            C 0 I 19
s Avahi_laniger.k141_2756659                                  6567 11 +     11645 CATCTTCTG-T------T
i Avahi_laniger.k141_2756659                             C 0 I 19
s Avahi_peyrierasi.k141_1823318                               6575 11 -     19611 CATCTTCTG-T------T
i Avahi_peyrierasi.k141_1823318                          C 0 I 19
s Balaenoptera_acutorostrata.KI537508.1                    7963808 11 -  23207421 TATCTAATT-T------C
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 19
s Balaenoptera_bonaerensis.DF411050.1                          308 11 -     25979 TATCTAATT-T------C
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 19
s Beatragus_hunteri.BeaHun_scaffold_7278                     86667 11 +    124022 TATCTAATT-T------C
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 19
s Bison_bison.KN261452.1                                     22201 11 +    288883 TATTTAGTT-T------C
i Bison_bison.KN261452.1                                 C 0 I 19
s Bos_indicus.CM003047.1                                  20356593 11 +  48749331 TATCTAGTT-T------C
i Bos_indicus.CM003047.1                                 C 0 I 19
s Bos_mutus.JH880303.1                                      755157 11 +   1948126 TATCTAGTT-T------C
i Bos_mutus.JH880303.1                                   C 0 I 19
s Bos_taurus.CM000203.6                                   27545299 11 -  45695690 TATCTAGTT-T------C
i Bos_taurus.CM000203.6                                  C 0 I 19
s Bubalus_bubalis.KI419123.1                               1530320 11 -   4408762 TATCTAGTT-T------C
i Bubalus_bubalis.KI419123.1                             C 0 I 19
s Cacajao_ayresi.k141_96119                                   8189 11 +     28062 CATCTAACA-T------T
i Cacajao_ayresi.k141_96119                              C 0 I 19
s Cacajao_calvus.k141_89051                                  43483 11 -     91139 CATCTAACA-T------T
i Cacajao_calvus.k141_89051                              C 0 I 19
s Cacajao_hosomi.k141_81245                                  21009 11 +     95584 CATCTAACA-T------T
i Cacajao_hosomi.k141_81245                              C 0 I 19
s Cacajao_melanocephalus.k141_619699                         20922 11 +    119600 CATCTAACA-T------T
i Cacajao_melanocephalus.k141_619699                     C 0 I 19
s Callibella_humilis.k141_1233062                            10495 11 +     18648 CATCTAATA-T------T
i Callibella_humilis.k141_1233062                        C 0 I 19
s Callimico_goeldii.k141_1609886                             10030 11 -     13885 CATCTAATA-C------T
i Callimico_goeldii.k141_1609886                         C 0 I 19
s Callithrix_geoffroyi.k119_459277                            2100 11 -      8861 CATCTAATA-T------T
i Callithrix_geoffroyi.k119_459277                       C 0 I 19
s Callithrix_jacchus.pat_scaffold_3                      165454492 11 + 189096842 CATCTAATA-T------T
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 19
s Callithrix_kuhlii.k119_102356                               2015 11 +      8664 CATCTAATA-T------T
i Callithrix_kuhlii.k119_102356                          C 0 I 19
s Camelus_bactrianus.KN276810.1                            7631321 11 +  17673402 TAtctaatt-t------c
i Camelus_bactrianus.KN276810.1                          C 0 I 20
s Camelus_dromedarius.KN272107.1                           4665607 11 +   7040546 TAtctaatt-t------c
i Camelus_dromedarius.KN272107.1                         C 0 I 20
s Camelus_ferus.KB017975.1                                 1209267 11 +   1652518 Tatctaatt-t------c
i Camelus_ferus.KB017975.1                               C 0 I 20
s CanFam4.chr16                                           42505693 11 +  60362399 CATCTAGTT-T------T
i CanFam4.chr16                                          C 0 I 19
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9329 11 -     23171 CATCTAGTT-T------T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 19
s Canis_lupus_dingo.QKWQ01000480.1                          222672 11 +   9314153 CATCTAGTT-T------T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 19
s Canis_lupus_familiaris.chr16                            41615807 11 +  59632846 CATCTAGTT-T------T
i Canis_lupus_familiaris.chr16                           C 0 I 19
s Canis_lupus_orion.HG994398.1                            45107388 11 -  63665305 CATCTAGTT-T------T
i Canis_lupus_orion.HG994398.1                           C 0 I 19
s Capra_aegagrus.CM003241.1                               27409388 11 -  46296322 TATCTAATT-T------C
i Capra_aegagrus.CM003241.1                              C 0 I 19
s Capra_hircus.CM004588.1                                 26591662 11 +  44709034 TATCTAATT-T------C
i Capra_hircus.CM004588.1                                C 0 I 19
s Capromys_pilorides.CapPil_scaffold_652123                   1847  7 -      1880 CAATTAA-----------
i Capromys_pilorides.CapPil_scaffold_652123              C 0 I 20
s Carlito_syrichta.NW_007259797.1                           270776 11 +    496798 Catcaaata-t------t
i Carlito_syrichta.NW_007259797.1                        C 0 I 19
s Carollia_perspicillata.CarPer_scaffold_107871                583 11 +      9923 CACCTAGTG-T------T
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 19
s Castor_canadensis.CasCan_scaffold_39952                    27980 11 -     39886 CAACTAATG-T------A
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 19
s Catagonus_wagneri.CatWag_scaffold_2839                     79862 11 -    217609 TAACTAATT-T------C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 19
s Cavia_aperea.AVPZ01000300.1                              4996728  7 +  23392119 CAACTAA-----------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 20
s Cavia_porcellus.DS562891.1                               5000169  7 +  23407841 CAACTAA-----------
i Cavia_porcellus.DS562891.1                             C 0 I 20
s Cavia_tschudii.CavTsc_scaffold_23560                       63250  7 -     66877 CAACTAA-----------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 20
s Cebuella_niveiventris.k141_592277                           5413 11 -     12580 CATCTAATA-T------T
i Cebuella_niveiventris.k141_592277                      C 0 I 19
s Cebuella_pygmaea.k141_145798                               43471 11 +     53515 CATCTAATA-T------T
i Cebuella_pygmaea.k141_145798                           C 0 I 19
s Cebus_albifrons.Contig27                                  371399 11 -  26074798 CATCTAATA-T------T
i Cebus_albifrons.Contig27                               C 0 I 19
s Cebus_olivaceus.k141_1404781                                8288 11 -     34880 CATCTAATA-T------T
i Cebus_olivaceus.k141_1404781                           C 0 I 19
s Cebus_unicolor.k141_1654760                                67383 11 -     89041 CATCTAATA-T------T
i Cebus_unicolor.k141_1654760                            C 0 I 19
s Cephalopachus_bancanus.k141_1689090                         2736 11 -      5494 CATCAAATA-T------T
i Cephalopachus_bancanus.k141_1689090                    C 0 I 19
s Ceratotherium_simum.JH767749.1                          15492496 11 -  27778364 CATCAGATG-T------C
i Ceratotherium_simum.JH767749.1                         C 0 I 19
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19329 11 +     27315 CATCAGATG-T------C
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 19
s Cercocebus_atys.KQ010504.1                                141614 11 -   4669795 CATCTAATA-T------T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45357 11 +     47900 CATCTAATA-T------T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            786 11 -     14410 CATCTAATA-T------T
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45170 11 -    148725 CATCTAATA-T------T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27372 11 -     40656 CATCTAATA-T------T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7336 11 +     20796 CATCTAATA-T------T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12454 11 -     17524 CATCTAATA-T------T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28181 11 -     34525 CATCTAATA-T------T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11957 11 -     25376 CATCTAATA-T------T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364551 11 -  39242232 CATCTAATA-T------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270271 11 +  21565898 CATCTAATA-T------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32639 11 -     45857 CATCTAATA-T------T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27540 11 -     32606 CATCTAATA-T------T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3702 11 +      8499 CATCTAATA-T------T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26098 11 +     70610 CATCTAATA-T------T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23066 11 +     36323 CATCTAATA-T------T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             30940 11 -     33796 CATCTTCTG-T------T
i Cheirogaleus_major.k141_666340                         C 0 I 19
s Cheirogaleus_medius.k141_759766                             5457 11 -     15404 CATCTTCTG-T------T
i Cheirogaleus_medius.k141_759766                        C 0 I 19
s Cheracebus_lucifer.k141_2312002                             9289 11 -     32913 CATTTAATA-T------T
i Cheracebus_lucifer.k141_2312002                        C 0 I 19
s Cheracebus_lugens.k141_1179667                             19702 11 -     40346 CATTTAATA-T------T
i Cheracebus_lugens.k141_1179667                         C 0 I 19
s Cheracebus_regulus.k141_471822                             19957 11 +    216457 CATTTAATA-T------T
i Cheracebus_regulus.k141_471822                         C 0 I 19
s Cheracebus_torquatus.k141_890198                           19750 11 +     39636 CATTTAATA-T------T
i Cheracebus_torquatus.k141_890198                       C 0 I 19
s Chinchilla_lanigera.JH722012.1                           1239084  7 -   2543920 CAACTAA-----------
i Chinchilla_lanigera.JH722012.1                         C 0 I 20
s Chiropotes_albinasus.k141_1946120                           4345 11 +      5346 CATGTAGTA-T------T
i Chiropotes_albinasus.k141_1946120                      C 0 I 19
s Chiropotes_israelita.k141_313004                           42820 11 -    112038 CATCTAACA-T------T
i Chiropotes_israelita.k141_313004                       C 0 I 19
s Chiropotes_sagulatus.k141_1113111                           8391 11 +     34062 CATCTAACA-T------T
i Chiropotes_sagulatus.k141_1113111                      C 0 I 19
s Chlorocebus_aethiops.ctg25                                343960 11 +  18827391 CATCTAATA-T------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10508 11 -     44032 CATCTAATA-T------T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305285 11 - 135778131 CATCTAATA-T------T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15131 11 +     15858 CATTTAATG-T------T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 19
s Choloepus_hoffmanni.KN194906.1                            606706 11 -    839153 CATTTAATG-T------T
i Choloepus_hoffmanni.KN194906.1                         C 0 I 19
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1126 11 +      2406 CTGTTAATG-T------T
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          I 6 I 22
s Colobus_angolensis.KN981557.1                             409690 11 -   2368649 CATCTAATA-T------T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379571 11 - 200372422 CATCTAATA-C------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3128 11 -     84244 CATCTAATA-C------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807558 11 +  53390261 CATCTAATA-T------C
i Condylura_cristata.JH655891.1                          C 0 I 18
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3089 11 -      8242 CATCTAGTG-T------C
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 19
s Cricetomys_gambianus.CriGam_scaffold_14425                 44603  9 -     83289 TAGCTAATG---------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 18
s Cricetulus_griseus.LT883664.1                          213115172 11 - 224834208 TAGCTAATG-T------C
i Cricetulus_griseus.LT883664.1                          C 0 I 19
s Crocidura_indochinensis.CroInd_scaffold_77846               9723 11 +     12657 CATTTAATG-T------C
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 18
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4666 11 +     87169 CATCTAGTT-T------T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 19
s Ctenodactylus_gundi.CteGun_scaffold_65                    645290 11 -   1526836 TACCTATTG-T------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 24
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18642  7 +     50838 CAATTAA-----------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 16
s Cuniculus_paca.CunPac_flattened_line_7025                   4645  7 +     36344 TAACTAA-----------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 20
s Dasyprocta_punctata.DasPun_flattened_line_15900            28421  7 +     75252 CAACTAA-----------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 20
s Daubentonia_madagascariensis.ctg71                        292876 11 +  12879189 CATCTAATG-T------T
i Daubentonia_madagascariensis.ctg71                     C 0 I 19
s Delphinapterus_leucas.KZ290073.1                        18632216 11 -  35494412 TATCTAATT-T------C
i Delphinapterus_leucas.KZ290073.1                       C 0 I 19
s Desmodus_rotundus.KZ672366.1                              330779 11 -   2620052 CATCTAGTG-T------C
i Desmodus_rotundus.KZ672366.1                           C 0 I 19
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664780 11 -   1390856 CATCAAATG-T------C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 19
s Diceros_bicornis.DicBicMic_scaffold_5955                  139573 11 -    198055 CATCAGATG-T------C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 19
s Dinomys_branickii.DinBra_scaffold_10381                    99172  7 -    115145 CCACTAA-----------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 20
s Dipodomys_ordii.KN672350.1                              18950806  4 -  37912305 ACAC--------------
i Dipodomys_ordii.KN672350.1                             C 0 I 14
s Dipodomys_stephensi.DipSte_scaffold_89095                   5731  4 -     10735 AAAC--------------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 14
s Eidolon_helvum.AWHC01266696.1                               6553 11 +     19438 CATATGGTG-T------C
i Eidolon_helvum.AWHC01266696.1                          C 0 I 19
s Elaphurus_davidianus.JRFZ01104969.1                       240028 11 -    607251 CATCTAATT-T------C
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 19
s Elephantulus_edwardii.JH947257.1                         9109196 11 -  10337057 atttttttt-t------c
i Elephantulus_edwardii.JH947257.1                       I 24 I 22
s Ellobius_lutescens.LOEQ01008920.1                          31320 11 +    110024 TAGCTAATG-T------T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 18
s Ellobius_talpinus.LOJH01026522.1                           13291 11 +     18970 TAGCTAATG-T------T
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 18
s Enhydra_lutris.KZ291758.1                               24916423 11 +  41312741 CATCTAGTT-G------C
i Enhydra_lutris.KZ291758.1                              C 0 I 20
s Eptesicus_fuscus.JH977646.1                             12579198 11 +  14770903 CACACAGTG-T------C
i Eptesicus_fuscus.JH977646.1                            C 0 I 19
s Equus_asinus.JREZ01000139.1                              3041658 10 -   4378816 CATC-GATG-T------C
i Equus_asinus.JREZ01000139.1                            C 0 I 19
s Equus_caballus.CM000403.2                               21375596 10 +  39960074 CAGC-GATG-T------C
i Equus_caballus.CM000403.2                              C 0 I 19
s Equus_przewalskii.KK951119.1                              411503 10 -    498745 CAGC-GATG-T------C
i Equus_przewalskii.KK951119.1                           I 96 I 113
s Erinaceus_europaeus.JH835339.1                           3666363 11 +   7059049 CATCTGATA-T------A
i Erinaceus_europaeus.JH835339.1                         C 0 I 19
s Erythrocebus_patas.Contig38                               263498 11 +  21539334 CATCTAATA-T------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71425 11 -    133382 TATCTAATT-T------C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 19
s Eubalaena_japonica.EubJap_flattened_line_247202              969 11 -      1170 TATCTAATT-T------T
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 I 19
s Eulemur_albifrons.k141_51491                               15089 11 -     24895 CATCTACTG-T------T
i Eulemur_albifrons.k141_51491                           C 0 I 15
s Eulemur_collaris.k141_601111                               42799 11 -     70999 CATCTACTG-T------T
i Eulemur_collaris.k141_601111                           C 0 I 15
s Eulemur_coronatus.k141_384460                              86769 11 +    112731 CATCTACTG-T------T
i Eulemur_coronatus.k141_384460                          C 0 I 15
s Eulemur_flavifrons.k141_433119                             43332 11 +     68309 CATCTACTG-T------T
i Eulemur_flavifrons.k141_433119                         C 0 I 15
s Eulemur_fulvus.k141_636316                                 53656 11 -     65740 CATCTACTG-T------T
i Eulemur_fulvus.k141_636316                             C 0 I 15
s Eulemur_macaco.k141_1562045                                24288 11 -     75513 CATCTACTG-T------T
i Eulemur_macaco.k141_1562045                            C 0 I 15
s Eulemur_mongoz.k141_232305                                 48483 11 -     97555 CATCTACTG-T------T
i Eulemur_mongoz.k141_232305                             C 0 I 15
s Eulemur_rubriventer.k141_1423786                            5207 11 +     30972 CATCTACTG-T------T
i Eulemur_rubriventer.k141_1423786                       C 0 I 15
s Eulemur_rufus.k141_514691                                  42927 11 -     52037 CATCTACTG-T------T
i Eulemur_rufus.k141_514691                              C 0 I 15
s Eulemur_sanfordi.k141_1122526                              59330 11 -    111500 CATCTACTG-T------T
i Eulemur_sanfordi.k141_1122526                          C 0 I 15
s Felis_catus.CM001381.2                                 186247123 11 - 206538554 GATCTAGTT-T------T
i Felis_catus.CM001381.2                                 C 0 I 19
s Felis_catus_fca126.CM031415.1                          185116909 11 - 205367284 GATCTAGTT-T------T
i Felis_catus_fca126.CM031415.1                          C 0 I 19
s Felis_nigripes.FelNig_flattened_line_31944                 28006 11 -     30238 GATCTAGTT-T------T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 19
s Fukomys_damarensis.KN121974.1                            2916726  7 -   3816255 CAGCTAA-----------
i Fukomys_damarensis.KN121974.1                          C 0 I 20
s Galago_moholi.ctg3793                                     125335 11 -    137831 AATCTAATG-T------G
i Galago_moholi.ctg3793                                  C 0 I 645
s Galago_senegalensis.k141_991736                             8880 11 +     22493 AATCTAATG-T------G
i Galago_senegalensis.k141_991736                        C 0 I 645
s Galagoides_demidoff.k141_561628                            20951 11 -     32986 AATCTAATG-T------G
i Galagoides_demidoff.k141_561628                        C 0 I 645
s Galeopterus_variegatus.GalVar_scaffold_51812                1468 11 -     28519 CATCTGGTG-C------T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 I 19
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91731 11 -     95226 TATCTAATT-T------C
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 19
s Glis_glis.GliGli_scaffold_33859                            34795 11 -     36801 CATCTAATG-T------T
i Glis_glis.GliGli_scaffold_33859                        C 0 I 15
s Gorilla_beringei.k141_3358147                               6120 11 -      8343 CTTCTAATA-T------T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255135 11 - 186649187 CTTCTAATA-T------T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2291 11 -     78134 CAACTAATG-C------T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 19
s Hapalemur_alaotrensis.k141_330369                          15014 11 -     40692 CATCTACTG-T------T
i Hapalemur_alaotrensis.k141_330369                      C 0 I 15
s Hapalemur_gilberti.k141_646465                             36416 11 +     49394 CATCTACTG-T------T
i Hapalemur_gilberti.k141_646465                         C 0 I 15
s Hapalemur_griseus.k141_763500                              61284 11 -     66874 CATTTACTG-T------T
i Hapalemur_griseus.k141_763500                          C 0 I 15
s Hapalemur_meridionalis.k141_258450                         10158 11 -     42923 CATCTACTG-T------T
i Hapalemur_meridionalis.k141_258450                     C 0 I 15
s Hapalemur_occidentalis.k141_578367                         17157 11 -     53142 CATCTACTG-T------T
i Hapalemur_occidentalis.k141_578367                     C 0 I 15
s Helogale_parvula.HelPar_flattened_line_2585                31099 11 -    327341 CATCTAGTT-T------T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 19
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9406 11 +     48891 TATCTAATT-T------C
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 19
s Heterocephalus_glaber.JH602082.1                         1932702  7 -  22651954 CAACAAA-----------
i Heterocephalus_glaber.JH602082.1                       C 0 I 20
s Heterohyrax_brucei.HetBruBak_scaffold_154059                1361 15 +      4291 CTTGTAATG-TCTG--TG
i Heterohyrax_brucei.HetBruBak_scaffold_154059           I 4 I 19
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7929 11 -     36432 TATCTAATT-T------T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 19
s Hipposideros_armiger.JXIK01000431.1                      1551910 11 -   1711038 CATCTAGTG-T------C
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 19
s Hipposideros_galeritus.HipGal_scaffold_164997               1349 11 -      2730 CATCTAGTG-T------C
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 19
s Hoolock_leuconedys.ctg274                                    143144 11 -    630532 CATCTAATA-T------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70263 11 +     83186 CATCTCGTT-T------T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 19
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72165  7 +    143317 CAACTAA-----------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 20
s Hylobates_agilis.k141_1155965                               6178 11 +     12352 CATCTAATA-T------T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13362 11 +     55766 CATCTAATA-T------T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052962 11 + 191637585 CATCTAATA-T------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801840 11 +  11177569 CATCTAATA-T------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7449  7 -    135385 AAAATAA-----------
i Hystrix_cristata.HysCri_scaffold_5660                  I 2641 I 21
s Ictidomys_tridecemlineatus.JH393364.1                     387143 11 +   7955117 TAACTAATG-T------T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 19
s Indri_indri.k141_2415743                                    2711 11 +     11955 CATATACTG-T------T
i Indri_indri.k141_2415743                               C 0 I 19
s Inia_geoffrensis.IniGeo_flattened_line_69447               10317 11 -     16823 TATCTAATT-T------C
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 19
s Jaculus_jaculus.JH725527.1                               1240184 11 +   9596543 TAACTAATG-C------C
i Jaculus_jaculus.JH725527.1                             C 0 I 19
s Kogia_breviceps.KogBre_flattened_line_3970                 72160 11 -     97402 TATCTAATT-T------C
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 19
s Lagothrix_lagothricha.k141_246028                          43565 11 +    110728 CATCTAATA-T------T
i Lagothrix_lagothricha.k141_246028                      C 0 I 19
s Lasiurus_borealis.LasBor_scaffold_16567                    63169 11 -     65777 CACACAGTG-T------C
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 26
s Lemur_catta.scaffold_24                                 14759807 11 +  30322482 CATCTACTG-T------T
i Lemur_catta.scaffold_24                                C 0 I 15
s Leontocebus_fuscicollis.k141_2994775                        4479 11 -     13097 CATCTAGTA-T------T
i Leontocebus_fuscicollis.k141_2994775                   C 0 I 19
s Leontocebus_illigeri.k141_2951200                           4233 11 +      5940 CATCTAGTA-T------T
i Leontocebus_illigeri.k141_2951200                      C 0 I 19
s Leontocebus_nigricollis.k141_3905062                        4063 11 -      5717 CATCTAGTA-T------T
i Leontocebus_nigricollis.k141_3905062                   C 0 I 19
s Leontopithecus_chrysomelas.k141_1327670                    10435 11 -     11567 CATCTAATA-T------T
i Leontopithecus_chrysomelas.k141_1327670                C 0 I 19
s Leontopithecus_rosalia.k141_349454                         11816 11 -     12945 CATCTAATA-T------T
i Leontopithecus_rosalia.k141_349454                     C 0 I 19
s Lepilemur_ankaranensis.k141_567626                          9317 11 +     29618 CATCTACTG-T------T
i Lepilemur_ankaranensis.k141_567626                     C 0 I 19
s Lepilemur_dorsalis.k141_387009                              9313 11 +     31569 CATCTACTG-T------T
i Lepilemur_dorsalis.k141_387009                         C 0 I 19
s Lepilemur_ruficaudatus.k141_330196                          9323 11 +     24756 CATCTACTG-T------T
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 19
s Lepilemur_septentrionalis.k141_360456                       9323 11 +     16388 CATCTACTG-T------T
i Lepilemur_septentrionalis.k141_360456                  C 0 I 19
s Leptonychotes_weddellii.KB714746.1                        813800 11 -   3914936 CATCTAGTT-C------C
i Leptonychotes_weddellii.KB714746.1                     C 0 I 19
s Lepus_americanus.LepAme_scaffold_56121                     18174 11 +     24238 CAATAAATG-T------T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 19
s Lipotes_vexillifer.KE559953.1                             341502 11 +    662738 TATCTAATT-T------C
i Lipotes_vexillifer.KE559953.1                          C 0 I 19
s Lophocebus_aterrimus.ctg367                               334499 11 -   1826925 CATCTAATA-T------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           10901 11 +     19643 AATCTAATG-T------G
i Loris_lydekkerianus.k141_2031736                       C 0 I 780
s Loris_tardigradus.ctg83                                  5044564 11 -   6120653 AATCTAATG-T------G
i Loris_tardigradus.ctg83                                C 0 I 787
s Loxodonta_africana.GL010049.1                           39081996 15 +  43346337 cttctaata-t--ttatT
i Loxodonta_africana.GL010049.1                          I 4 I 19
s Lycaon_pictus.CM007581.1                                41614962 11 +  59628241 CATCTAGTT-T------T
i Lycaon_pictus.CM007581.1                               C 0 I 19
s Macaca_arctoides.k141_1757516                              45894 11 -     61512 CATCTAATA-T------T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373556 11 -  60120075 CATCTAATA-T------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25818 11 +     30207 CATCTAATA-T------T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             656 11 -      5035 CATCTAATA-T------T
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25771 11 +     30527 CATCTAATA-T------T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36947 11 -     50087 CATCTAATA-T------T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46691 11 +     51645 CATCTAATA-T------T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415894 11 - 187317192 CATCTAATA-T------T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400124 11 +  25927173 CATCTAATA-T------T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49296 11 -     62418 CATCTAATA-T------T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1833 11 +     14901 CATCTAATA-T------T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45768 11 +     59329 CATCTAATA-T------T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271676 11 +    668171 CATCTAATA-T------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   320 11 -      5049 CATCTAATA-T------T
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3474 11 +     17132 CATCTAATA-T------T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223523 11 -    270270 CATCTGGTG-T------C
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 20
s Mandrillus_leucophaeus.scaffold280                        322964 11 +  24302211 CATCTAATA-T------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357795 11 -    752769 CATCTAATA-T------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673850 11 -    737560 CATCTAGTG-T------T
i Manis_javanica.JSZB01003497.1                          C 0 I 19
s Manis_pentadactyla.KN006162.1                             221146 11 +    317179 CATCTAGTG-T------T
i Manis_pentadactyla.KN006162.1                          C 0 I 19
s Marmota_marmota.CZRN01000018.1                           7501362 11 +  40650429 TAACTAATG-T------T
i Marmota_marmota.CZRN01000018.1                         C 0 I 19
s Megaderma_lyra.MegLyr_scaffold_4542                       150695 11 +    207569 CATCCAATG-T------C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 18
s Meriones_unguiculatus.MerUng_scaffold_7390                 50456  9 -    140813 TAACTAATG---------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 18
s Mesocricetus_auratus.KB708134.1                         17429556 11 +  29670104 TAGCTAATG-T------T
i Mesocricetus_auratus.KB708134.1                        C 0 I 19
s Mesoplodon_bidens.MesBid_scaffold_6114                     87786 11 +     93471 TATCTAATT-T------C
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 19
s Mico_argentatus.k141_582562                                10602 11 +     17804 CATCTAATA-T------T
i Mico_argentatus.k141_582562                            C 0 I 19
s Mico_humeralifer.k141_1180625                              11102 11 -     12984 CATCTAATA-T------T
i Mico_humeralifer.k141_1180625                          C 0 I 19
s Mico_schneideri.k141_1877700                                     19418 11 -     26561 CATCTAATA-T------T
i Mico_schneideri.k141_1877700                                 C 0 I 19
s Microcebus_murinus.CM007674.1                           74985153 11 +  93316391 CATCTACAG-T------T
i Microcebus_murinus.CM007674.1                          C 0 I 19
s Microgale_talazaci.MicTal_scaffold_6613                    46489 11 +    145209 TTTCTAATG-T------T
i Microgale_talazaci.MicTal_scaffold_6613                I 8 I 19
s Micronycteris_hirsuta.MicHir_scaffold_2233                185383 11 +    200668 TATCTAGTG-T------T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 19
s Microtus_ochrogaster.CM001695.1                         15962760 11 +  27267610 TAGCTAATG-T------T
i Microtus_ochrogaster.CM001695.1                        C 0 I 18
s Miniopterus_natalensis.LDJU01000034.1                    6363546 11 -   8254450 CAACTAGTG-T------C
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 19
s Miniopterus_schreibersii.MinSch_scaffold_23309             42453 11 -     48117 CAACTAGTG-T------C
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 19
s Miopithecus_ogouensis.k141_1534655                         22998 11 -     27822 GATCTAATA-T------T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8811 11 +     27589 CATCTAGTT-C------C
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 19
s Mirza_zaza.k141_766280                                     52940 11 -     62432 catctactg-t------t
i Mirza_zaza.k141_766280                                 C 0 I 15
s Monodon_monoceros.MonMon_M_scaffold_103                   359891 11 +    437263 TATCTAATT-T------C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 19
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179611 11 +    366855 CATCTAGTG-T------T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 19
s Moschus_moschiferus.MosMos_scaffold_13123                  25853 11 -     82753 TATCTAATT-T------C
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 19
s Mungos_mungo.MunMun_flattened_line_18455                   18850 11 -     63510 CATCTAGTT-T------T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 19
s Murina_feae.MurFea_scaffold_17764                          39511 11 +     47283 CAGATAGTG-T------C
i Murina_feae.MurFea_scaffold_17764                      C 0 I 19
s Mus_caroli.LT608237.1                                   35593480  9 + 120012414 TAACTAATG---------
i Mus_caroli.LT608237.1                                  C 0 I 18
s Mus_musculus.chr8                                       41687866 11 + 129401213 TAACTAATG-T------T
i Mus_musculus.chr8                                      C 0 I 19
s Mus_spretus.CM004101.1                                  39497159 11 + 130317789 TAACTAATG-T------T
i Mus_spretus.CM004101.1                                 C 0 I 19
s Muscardinus_avellanarius.MusAve_scaffold_12866             83847 11 -     86153 CAACAAATG-T------T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 19
s Mustela_putorius.JH418006.1                             14355445 11 +  14710649 CATCTAGTT-G------C
i Mustela_putorius.JH418006.1                            C 0 I 20
s Myocastor_coypus.MyoCoy_scaffold_15261                     63427  7 +     67721 TGACTGA-----------
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 16
s Myotis_brandtii.KE162005.1                               9793799 11 +  10118263 CAGACAGTG-T------C
i Myotis_brandtii.KE162005.1                             C 0 I 19
s Myotis_davidii.KB100139.1                                4387930 11 +   6019432 CAGACAGTG-T------C
i Myotis_davidii.KB100139.1                              C 0 I 19
s Myotis_lucifugus.GL429869.1                               383758 11 +   4330536 CAGACAGTG-T------C
i Myotis_lucifugus.GL429869.1                            C 0 I 19
s Myotis_myotis.MyoMyo_scaffold_66571                         2567 11 +     18357 CAGACAGTG-T------C
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 19
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120096 11 +    130748 CATCTAATG-C------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 19
s Nannospalax_galili.KL204047.1                             946603 11 +   3037898 TAACTAGTG-T------T
i Nannospalax_galili.KL204047.1                          C 0 I 19
s Nasalis_larvatus.k141_1350636                              29647 11 +     34575 CATCTAATA-T------T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232569 11 -   7148211 TATCTAATT-T------C
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 19
s Noctilio_leporinus.NocLep_scaffold_7894                   128579 11 -    149072 catCCAGTG-T------T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 19
s Nomascus_annamensis.k141_1771965                           54070 11 -    132029 CATCTAATA-T------T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10165 11 -     16345 CATCTAATA-T------T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16050 11 +     22201 CATCTAATA-T------T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414271 11 -  22158432 CATCTAATA-T------T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26448 11 -     54323 CATCTAATA-T------T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198558 11 +   9404916 CATCTAGTT-T------T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 19
s Nycticebus_bengalensis.LG01                             93636929 11 + 196305487 AATCTAATG-T------G
i Nycticebus_bengalensis.LG01                            C 0 I 1652
s Nycticebus_coucang.k141_3846325                             3683 11 -      3937 AATCTAATG-T------G
i Nycticebus_coucang.k141_3846325                        C 0 N 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93565188 11 - 199412804 AATCTAATG-T------G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 773
s Ochotona_princeps.JH802162.1                             2557234 11 -   3988456 CAATTAACA-T------T
i Ochotona_princeps.JH802162.1                           C 0 I 19
s Octodon_degus.JH651603.1                                11055380  7 -  11899542 CAACTAA-----------
i Octodon_degus.JH651603.1                               C 0 I 16
s Odobenus_rosmarus.KB229312.1                             1452020 11 +   2017862 CATCTAGTT-G------C
i Odobenus_rosmarus.KB229312.1                           C 0 I 19
s Odocoileus_virginianus.KZ100018.1                         436621 11 -    630418 TATCTaatt-t------c
i Odocoileus_virginianus.KZ100018.1                      C 0 I 19
s Okapia_johnstoni.LVCL01S0005463.1                          14614 11 +    150152 TACGTAATT-T------C
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 19
s Ondatra_zibethicus.OndZib_scaffold_7387                    93117 11 -    140218 TAGCTAATG-T------T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 18
s Onychomys_torridus.OnyTor_scaffold_28377                    3995 11 -     41509 tagctagtG-T------T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 19
s Orcinus_orca.KB316932.1                                  8102959 11 +  10937097 TATCTAACT-T------C
i Orcinus_orca.KB316932.1                                C 0 I 19
s Orycteropus_afer.OryAfe_flattened_line_1597630               113 11 -       378 CTTCTAATA-T------C
i Orycteropus_afer.OryAfe_flattened_line_1597630         I 7 I 221
s Oryctolagus_cuniculus.CM000791.1                       107103968 11 - 174332312 CAATAAAAG-T------T
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 19
s Otocyon_megalotis.JAEUCK010005147.1                        39603 11 +    559221 CATCTAGTT-T------T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 19
s Otolemur_crassicaudatus.k141_649260                        40482 11 -     51505 AATCTAATG-T------G
i Otolemur_crassicaudatus.k141_649260                    C 0 I 644
s Otolemur_garnettii.GL873799.1                             353485 11 +   1103335 AATCTAATG-T------G
i Otolemur_garnettii.GL873799.1                          C 0 I 645
s Ovis_aries.CM001607.2                                   26404526 11 -  44047080 TATCTAATT-T------C
i Ovis_aries.CM001607.2                                  C 0 I 19
s Ovis_canadensis.OviCan_scaffold_67953                       5045 11 +     17875 TATCTAATT-T------C
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 19
s Pan_troglodytes.NBAG03003091.1                             12796 16 -     26668 CTTCAAATA-T-TGACCT
i Pan_troglodytes.NBAG03003091.1                         C 0 I 27
s Panthera_onca.PanOnc_flattened_line_3271                   24829 11 -    230217 GATCTAGTT-T------T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 19
s Panthera_pardus.KV860321.1                              18462155 11 -  18783137 GATCTAGTT-T------T
i Panthera_pardus.KV860321.1                             C 0 I 19
s Panthera_tigris.KE722367.1                               3972814 11 +   8748460 GATCTAGTT-T------T
i Panthera_tigris.KE722367.1                             C 0 I 19
s Pantholops_hodgsonii.KE114653.1                          1616054 11 +   2937107 TATCTAATT-T------C
i Pantholops_hodgsonii.KE114653.1                        C 0 I 19
s Papio_anubis.CM001495.2                                   243796 11 - 183742232 CATCTAATA-T------T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10258 11 +     21308 CATCTAATA-T------T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292831 11 -  20919399 CATCTAATA-T------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22906 11 -     27687 CATCTAATA-T------T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16052 11 +     16796 CATCTAATA-T------T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22863 11 -     23640 CATCTAATA-T------T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15426 11 +     78924 AATCTAGTT-T------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 19
s Perodicticus_ibeanus.k141_1921260                          26680 11 +     31479 AGTCTAATG-T------G
i Perodicticus_ibeanus.k141_1921260                      C 0 I 782
s Perodicticus_potto.k141_1854441                            19050 11 -     24908 AGTCTAATG-T------G
i Perodicticus_potto.k141_1854441                        C 0 I 781
s Perognathus_longimembris.PerPac_flattened_line_89005        2147 11 +      9367 CAACTAATG-T------T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 19
s Peromyscus_maniculatus.KI615324.1                         247192 11 +  18517816 TAGCTAATG-C------T
i Peromyscus_maniculatus.KI615324.1                      C 0 I 19
s Petromus_typicus.PetTyp_scaffold_17301                     32290  7 -     56120 CAAATAA-----------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 20
s Phocoena_phocoena.PhoPho_flattened_line_24159               4485 11 -     63832 TATCTAATT-T------C
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 19
s Piliocolobus_badius.k141_2704958                            3082 11 +     55023 CATCTAATA-T------T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2620 11 -     89929 CATCTAATA-T------T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3210 11 +     40849 CATCTAATA-T------T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254884 11 +  14605196 CATCTAATA-T------T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4106 11 +     22231 CACACAATA-T------C
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 19
s Pithecia_albicans.k141_1239476                             65187 11 +    207309 CATCTAATA-T------T
i Pithecia_albicans.k141_1239476                         C 0 I 19
s Pithecia_chrysocephala.k141_785207                          6279 11 -     25401 CATCTAATA-T------T
i Pithecia_chrysocephala.k141_785207                     C 0 I 19
s Pithecia_hirsuta.k141_640380                               32023 11 +     58159 CATCTAATA-T------T
i Pithecia_hirsuta.k141_640380                           C 0 I 19
s Pithecia_mittermeieri.k141_1280039                         32299 11 +     63561 CATCTAATA-T------T
i Pithecia_mittermeieri.k141_1280039                     C 0 I 19
s Pithecia_pissinattii.k141_878371                           32059 11 +     51148 CATCTAATA-T------T
i Pithecia_pissinattii.k141_878371                       C 0 I 19
s Pithecia_pithecia.tarseq_165                              557029 11 -   4542175 CATCTAATA-T------T
i Pithecia_pithecia.tarseq_165                           C 0 I 19
s Pithecia_vanzolinii.k141_1369553                           32043 11 +     51125 CATCTAATA-T------T
i Pithecia_vanzolinii.k141_1369553                       C 0 I 19
s Platanista_gangetica.PlaMin_flattened_line_83166            1483 11 +     19503 TATCTAATT-T------C
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 19
s Plecturocebus_bernhardi.k141_2549090                        8454 11 +     39866 CACCTAATA-T------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 19
s Plecturocebus_brunneus.k141_862875                          3536 11 -      9282 CACCTAATA-T------T
i Plecturocebus_brunneus.k141_862875                     C 0 I 19
s Plecturocebus_caligatus.k141_1382851                       42940 11 -     87950 CACCTAATA-T------T
i Plecturocebus_caligatus.k141_1382851                   C 0 I 19
s Plecturocebus_cinerascens.k141_1164729                     43336 11 -     88961 CACCTAATA-T------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 19
s Plecturocebus_cupreus.k141_2351393                          8032 11 -     39403 CACCTAATA-T------T
i Plecturocebus_cupreus.k141_2351393                     C 0 I 19
s Plecturocebus_dubius.k141_1058799                          42983 11 +     87928 CACCTAATA-T------T
i Plecturocebus_dubius.k141_1058799                      C 0 I 19
s Plecturocebus_grovesi.k141_2013005                          8031 11 -     60166 CACCTAATA-T------T
i Plecturocebus_grovesi.k141_2013005                     C 0 I 19
s Plecturocebus_hoffmannsi.k141_3303950                      14968 11 -     67232 CACCTAATA-T------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 19
s Plecturocebus_miltoni.k141_349282                          42884 11 -     90634 CACCTAATA-T------T
i Plecturocebus_miltoni.k141_349282                      C 0 I 19
s Plecturocebus_moloch.k141_1031110                          44351 11 +     89403 CACCTAATA-T------T
i Plecturocebus_moloch.k141_1031110                      C 0 I 19
s Pongo_abelii.CM009266.2                                   178273 11 - 189387572 CAGCTAATA-T------T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193090 11 -   9816681 CAGCTAATA-T------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28227 11 +     69807 CATCTAATA-T------T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45408 11 -     80239 CATCTAATA-T------T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 1186 15 +      7663 CTTGTAATG-TCTG--TG
i Procavia_capensis.ProCapCap_scaffold_165387            I 4 I 19
s Prolemur_simus.MPIZ01000396.1                            1982955 11 +   4620579 CATCTACTG-T------T
i Prolemur_simus.MPIZ01000396.1                          C 0 I 15
s Propithecus_coquerelli.NW_012148875.1                    1566462 11 -   2598838 CGTCTACTG-T------T
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 19
s Propithecus_coronatus.k141_209299                           4100 11 -      7103 CATCTACTG-T------T
i Propithecus_coronatus.k141_209299                      C 0 I 19
s Propithecus_diadema.k141_153680                             4697 11 -     11706 CATCTACTG-T------T
i Propithecus_diadema.k141_153680                        C 0 I 19
s Propithecus_edwardsi.k141_635656                            8435 11 -     30655 CATCTACTG-T------T
i Propithecus_edwardsi.k141_635656                       C 0 I 19
s Propithecus_perrieri.k141_1496898                          34748 11 +     46564 CATCTACCG-T------T
i Propithecus_perrieri.k141_1496898                      C 0 I 19
s Propithecus_tattersalli.k141_1127767                       95027 11 -     98465 CATCTACTG-T------T
i Propithecus_tattersalli.k141_1127767                   C 0 I 19
s Propithecus_verreauxi.k141_1047036                          8666 11 +     35169 CATCTACTG-T------T
i Propithecus_verreauxi.k141_1047036                     C 0 I 19
s Psammomys_obesus.NESX01036366.1                            37799  9 +     52041 TAACCAATG---------
i Psammomys_obesus.NESX01036366.1                        C 0 I 18
s Pteronotus_parnellii.KE847780.1                            52504 11 -     66298 CACCTAGTA-T------T
i Pteronotus_parnellii.KE847780.1                        C 0 I 19
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5018 11 -     18639 CATCTAGTT-G------C
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 20
s Pteropus_alecto.KB030862.1                               5841093 11 -  28871421 CATCTGGTG-T------C
i Pteropus_alecto.KB030862.1                             C 0 I 19
s Pteropus_vampyrus.KN525825.1                             3537608 11 -   4952924 CATCTGGTG-T------C
i Pteropus_vampyrus.KN525825.1                           C 0 I 19
s Puma_concolor.QAVW01001104.1                            18099472 11 +  38429054 GATCTAGTT-T------T
i Puma_concolor.QAVW01001104.1                           C 0 I 19
s Pygathrix_cinerea.k141_1153803                             27603 11 +     91421 CATCTAATA-T------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154087 11 -   7812017 CATCTAATA-T------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8460 11 +     72585 CATCTAATA-T------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53538 11 +     55069 TATCTAATT-T------C
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 19
s Rattus_norvegicus.chr16                                 37023082 11 -  90668790 TAACTAATG-T------T
i Rattus_norvegicus.chr16                                C 0 I 19
s Rhinolophus_sinicus.LVEH01000134.1                       2915072 11 +   3329780 CAGTTAGTG-T------C
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 19
s Rhinopithecus_bieti.k119_778604                             2181 11 +      7119 CATCTAATA-T------T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122797 11 + 195417433 CATCTAATA-T------T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237023 11 -   7961872 CATCTAATA-T------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75138 11 -    116970 CATCTGGTG-T------C
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 19
s Saguinus_bicolor.k141_1429097                               4343 11 +     27962 CATGTAGTA-T------T
i Saguinus_bicolor.k141_1429097                          C 0 I 19
s Saguinus_geoffroyi.k141_3779887                             4237 11 +      6077 CATCTAGTA-T------T
i Saguinus_geoffroyi.k141_3779887                        C 0 I 19
s Saguinus_imperator.k141_1898058                             4327 11 +      5971 CATCTAGAA-T------T
i Saguinus_imperator.k141_1898058                        C 0 I 19
s Saguinus_inustus.k141_2469308                               4248 11 +      5932 CATCTAGAA-T------T
i Saguinus_inustus.k141_2469308                          C 0 I 19
s Saguinus_labiatus.k141_2380921                              2590 11 -      4390 CATCTAGAA-T------T
i Saguinus_labiatus.k141_2380921                         C 0 I 19
s Saguinus_midas.LG03                                       392027 11 - 209938924 CATGTAGTA-T------T
i Saguinus_midas.LG03                                    C 0 I 19
s Saguinus_mystax.k141_8077960                                4197 11 +      5979 CATCTAGAA-T------C
i Saguinus_mystax.k141_8077960                           C 0 I 19
s Saguinus_oedipus.k141_1280589                                766 11 -     22275 CATCTAGTA-T------T
i Saguinus_oedipus.k141_1280589                          C 0 I 19
s Saiga_tatarica.SaiTat_scaffold_39512                        8214 11 +     16473 TATCTAATT-T------C
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 19
s Saimiri_boliviensis.NW_024100920.1                       1109362 11 + 121099817 CATCTAATA-T------T
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 19
s Saimiri_cassiquiarensis.k141_1467335                       30929 11 -     47369 CATCTAATA-T------T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 I 19
s Saimiri_macrodon.k141_1173117                              31315 11 -     79414 CATCTAATA-T------T
i Saimiri_macrodon.k141_1173117                          C 0 I 19
s Saimiri_oerstedii.k141_245838                              28006 11 -     34454 CATCTAATA-T------T
i Saimiri_oerstedii.k141_245838                          C 0 I 19
s Saimiri_sciureus.k141_1467173                              15407 11 -     22428 CATCTAATA-T------T
i Saimiri_sciureus.k141_1467173                          C 0 I 19
s Saimiri_ustus.k141_360372                                  30561 11 -     47109 CATCTAATA-T------T
i Saimiri_ustus.k141_360372                              C 0 I 19
s Sapajus_apella.ctg103                                     238607 11 +   5703754 CATCTAATA-T------T
i Sapajus_apella.ctg103                                  C 0 I 19
s Sapajus_macrocephalus.k141_796559                           8197 11 +     21866 CATCTAATA-T------T
i Sapajus_macrocephalus.k141_796559                      C 0 I 19
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116250 11 +    313613 CATCTAATG-T------C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 19
s Semnopithecus_entellus.k141_158471                         25922 11 +     27374 CATCTAATA-T------T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29434 11 +     58920 CATCTAATA-T------T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15932 11 -     45317 CATCTAATA-T------T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23590 11 -     42441 CATCTAATA-T------T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26268 11 -     29113 CATCTAATA-T------T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29343 11 -     48123 CATCTAATA-T------T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49570 11 +     77746 TAGCTAATG-T------T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 19
s Solenodon_paradoxus.SolPar_flattened_line_126            1864533 11 -   1910179 CATCTAATG-T------C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 15
s Sorex_araneus.JH798187.1                                 4671661  8 +  18376816 ---TTAGTG-T------C
i Sorex_araneus.JH798187.1                               C 0 I 18
s Spermophilus_dauricus.KZ294078.1                         1868722 11 +   3870691 TAACTAATG-T------T
i Spermophilus_dauricus.KZ294078.1                       C 0 I 19
s Spilogale_gracilis.SpiGra_flattened_line_13525              7102 11 -     97271 CATCTAGTT-G------C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 20
s Suricata_suricatta.SurSur_flattened_line_6629             125250 11 +    196729 CATCTAGTT-T------T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 19
s Sus_scrofa.CM000828.4                                    6644121 11 +  69701581 TATCTAATT-T------C
i Sus_scrofa.CM000828.4                                  C 0 I 19
s Symphalangus_syndactylus.tarseq_199                       391530 11 +   1523678 CATCTAATA-T------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14669 11 +     22964 CATCTAGTG-T------C
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 19
s Tamandua_tetradactyla.TamTet_scaffold_224794                3087 11 +      5583 CATCTAATG-T------T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 19
s Tapirus_indicus.TapInd_scaffold_7432                      191975 11 +    199430 CATCAGATG-T------C
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 19
s Tapirus_terrestris.TapTer_scaffold_755                    105945 11 -    539355 CATCAGATG-T------C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 19
s Tarsius_lariang.k141_1733899                                1009 11 +      9917 CATCAAATA-T------T
i Tarsius_lariang.k141_1733899                           C 0 I 19
s Tarsius_wallacei.k141_226975                                7807 11 +     20590 CATCAAATA-T------T
i Tarsius_wallacei.k141_226975                           C 0 I 19
s Theropithecus_gelada.CM009954.1                           353782 11 - 186847797 CATCTAATA-T------T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24449  7 -     33621 CAACTAA-----------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 20
s Tonatia_saurophila.TonSau_scaffold_294                    480498 11 -    610378 CATCTAGGG-T------T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 19
s Trachypithecus_auratus.k141_1189070                        21467 11 +     26378 CATCTAATA-T------T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34143 11 -     78344 CATCTAATA-T------T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20792 11 +     25722 CATCTAATA-T------T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29099 11 -     62838 CATCTAATA-T------T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29143 11 +     46913 CATCTAATA-T------T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9952 11 -     28527 CATCTAATA-T------T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31034 11 -     64340 CATCTAATA-T------T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29072 11 -     63452 CATCTAATA-T------T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10519 11 +     22490 CATCTAATA-T------T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3942 11 -      6147 CATCTAATA-T------T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10855 11 -     13050 CATCTAATA-T------T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256085 11 -   6242583 CATCTAATA-T------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2113 11 +     19340 CATCTAATA-T------T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173826 11 -    200418 TATCTAGTT-T------C
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 19
s Trichechus_manatus.JH594705.1                            6480814 15 -  10818551 CTTCTAATG-T-T-TGTT
i Trichechus_manatus.JH594705.1                          I 4 I 19
s Tupaia_chinensis.KB320699.1                              1834752 11 -   4065304 CATCTAATC-T------G
i Tupaia_chinensis.KB320699.1                            C 0 I 19
s Tupaia_tana.TupTan_flattened_line_394                       8774  6 -     70247 -----AATC-T------G
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 19
s Tursiops_truncatus.MRVK01000835.1                       17366072 11 -  33153633 TATCTAATT-T------C
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 19
s Uropsilus_gracilis.UroGra_scaffold_46687                    3987 11 -     21056 CCTCTACTG-T------C
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 19
s Ursus_maritimus.KK499267.1                                182189 11 +   5085361 CATCTAGTT-G------C
i Ursus_maritimus.KK499267.1                             C 0 I 19
s Varecia_rubra.k141_787544                                  25603 11 -     30710 TACCTACTG-T------T
i Varecia_rubra.k141_787544                              C 0 I 19
s Varecia_variegata.k141_289850                              24510 11 -    147434 TACCTACTG-T------T
i Varecia_variegata.k141_289850                          C 0 I 19
s Vicugna_pacos.KN270157.1                                   76654 11 +   5488506 Tatctaatt-t------c
i Vicugna_pacos.KN270157.1                               C 0 I 21
s Vulpes_lagopus.VulLag_flattened_line_12041                105324 11 -    112863 CATCTAGTT-T------T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 19
s Xerus_inauris.XerIna_scaffold_2302                        174517 11 -    224448 CAACTAATA-T------T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 19
s Zalophus_californianus.ZalCal_flattened_line_17732         29228 11 -     86975 CATCTAGTT-G------C
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 19
s Zapus_hudsonius.ZapHud_scaffold_286923                       349 11 -      1899 CAAATAATG-C------C
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 I 17
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1361 11 +      2126 TATCTAATT-T------C
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 I 19
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Echinops_telfairi.JH980293.1                            62855344  1 - 111700974 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   20118 18 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2110378 18 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13026 18 -     19938 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mellivora_capensis.MelCap_flattened_line_19308             26567  0 -     74585 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5831 7 +     36723 ACG-T-GCA
s Acinonyx_jubatus.LLWD01001279.1                           813244 7 +   1699592 GTA-A-GCA
i Acinonyx_jubatus.LLWD01001279.1                        I 19 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25489 7 +     63021 CTG-T-GCA
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 18 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415705 7 +  29979442 GTA-T-ACA
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 19 C 0
s Ailurus_fulgens.LNAC01001112.1                            216041 7 +    347723 GTA-T-ATA
i Ailurus_fulgens.LNAC01001112.1                         I 20 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18456 7 -     61208 ATG-T-GCA
i Allactaga_bullata.AllBul_scaffold_20030                I 19 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48469 7 +     53615 ACG-T-GCA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           500 7 +     13857 ACG-T-GCA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17051 7 -     21945 ACG-T-GCA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18736 7 +     32033 ACG-T-GCA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72579 7 -     84148 ATG-T-GCA
i Alouatta_belzebul.k141_1011583                         I 19 C 0
s Alouatta_caraya.k141_1109140                               44818 7 -     78289 ATG-T-GCA
i Alouatta_caraya.k141_1109140                           I 19 C 0
s Alouatta_discolor.k141_2561099                             44257 7 +     55831 ATG-T-GCA
i Alouatta_discolor.k141_2561099                         I 19 C 0
s Alouatta_juara.k141_1687208                                42707 7 -     64179 ATG-T-GCA
i Alouatta_juara.k141_1687208                            I 19 C 0
s Alouatta_macconnelli.k141_361275                           24341 7 -     24835 ATG-T-GCA
i Alouatta_macconnelli.k141_361275                       I 19 C 0
s Alouatta_nigerrima.k141_376068                             41332 7 +     45454 ATG-T-GCA
i Alouatta_nigerrima.k141_376068                         I 19 C 0
s Alouatta_palliata.k141_638677                              46981 7 +     70886 ATG-T-GCA
i Alouatta_palliata.k141_638677                          I 19 C 0
s Alouatta_puruensis.k141_251022                              9154 7 +     30854 ATG-T-GCA
i Alouatta_puruensis.k141_251022                         I 19 C 0
s Alouatta_seniculus.k141_928287                             33288 7 +     42133 ATG-T-GCA
i Alouatta_seniculus.k141_928287                         I 19 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585689 7 +   2318259 GTA-T-GAA
i Ammotragus_lervia.NIVO01071767.1                       I 19 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177491 7 -    412891 ACA-T-GCA
i Anoura_caudifer.AnoCau_scaffold_1412                   I 19 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50795 7 -     68529 GTA-T-GAA
i Antilocapra_americana.AntAmePen_scaffold_21030         I 19 C 0
s Aotus_azarae.k141_887050                                    1545 7 +     17741 ATG-T-GCA
i Aotus_azarae.k141_887050                               I 19 C 0
s Aotus_griseimembra.k141_3192254                             2170 7 -     15923 ATG-T-GCA
i Aotus_griseimembra.k141_3192254                        I 19 C 0
s Aotus_nancymaae.KZ198451.1                                672452 7 +   5030052 ATG-T-GCA
i Aotus_nancymaae.KZ198451.1                             I 19 C 0
s Aotus_trivirgatus.k141_318729                               2446 7 -     16391 ATG-T-GCA
i Aotus_trivirgatus.k141_318729                          I 19 C 0
s Aotus_vociferans.k141_1514463                               2005 7 -     17186 ATG-T-GCA
i Aotus_vociferans.k141_1514463                          I 19 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16525 7 -     32367 ATG-T-GGA
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 19 C 0
s Arctocebus_calabarensis.k141_1364444                       20628 7 -     45910 GTG-T-GCA
i Arctocebus_calabarensis.k141_1364444                   I 732 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5757 7 -     15198 ATA-T-GCA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 19 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275042 7 +  21539123 ATG-T-GCA
i Ateles_geoffroyi_b.tarseq_1536                            I 19 C 0
s Ateles_belzebuth.k141_1572163                              11210 7 +     48076 ATG-T-GCA
i Ateles_belzebuth.k141_1572163                          I 19 C 0
s Ateles_chamek.k141_615173                                   6345 7 -     28759 ATG-T-GCA
i Ateles_chamek.k141_615173                              I 19 C 0
s Ateles_geoffroyi_a.k141_1283730                              33899 7 +     44353 ATG-T-GCA
i Ateles_geoffroyi_a.k141_1283730                          I 19 C 0
s Ateles_marginatus.k141_970259                              49270 7 -     71267 ATG-T-GCA
i Ateles_marginatus.k141_970259                          I 19 C 0
s Ateles_paniscus.k141_866194                                23328 7 -     33135 ATG-T-GCA
i Ateles_paniscus.k141_866194                            I 19 C 0
s Avahi_laniger.k141_2756659                                  6597 7 +     11645 ATG-T-GCA
i Avahi_laniger.k141_2756659                             I 19 C 0
s Avahi_peyrierasi.k141_1823318                               6605 7 -     19611 ATG-T-GCA
i Avahi_peyrierasi.k141_1823318                          I 19 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963838 7 -  23207421 tta-t-tca
i Balaenoptera_acutorostrata.KI537508.1                  I 19 C 0
s Balaenoptera_bonaerensis.DF411050.1                          338 7 -     25979 tta-t-tca
i Balaenoptera_bonaerensis.DF411050.1                    I 19 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86697 7 +    124022 GTA-T-GAA
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 19 C 0
s Bison_bison.KN261452.1                                     22231 7 +    288883 GTA-T-GAA
i Bison_bison.KN261452.1                                 I 19 C 0
s Bos_indicus.CM003047.1                                  20356623 7 +  48749331 GTA-T-GAA
i Bos_indicus.CM003047.1                                 I 19 C 0
s Bos_mutus.JH880303.1                                      755187 7 +   1948126 GTA-T-GAA
i Bos_mutus.JH880303.1                                   I 19 C 0
s Bos_taurus.CM000203.6                                   27545329 7 -  45695690 GTA-T-GAA
i Bos_taurus.CM000203.6                                  I 19 C 0
s Bubalus_bubalis.KI419123.1                               1530350 7 -   4408762 GTA-T-GAA
i Bubalus_bubalis.KI419123.1                             I 19 C 0
s Cacajao_ayresi.k141_96119                                   8219 7 +     28062 ATG-T-GTA
i Cacajao_ayresi.k141_96119                              I 19 C 0
s Cacajao_calvus.k141_89051                                  43513 7 -     91139 ATG-T-GTA
i Cacajao_calvus.k141_89051                              I 19 C 0
s Cacajao_hosomi.k141_81245                                  21039 7 +     95584 ATG-T-GTA
i Cacajao_hosomi.k141_81245                              I 19 C 0
s Cacajao_melanocephalus.k141_619699                         20952 7 +    119600 ATG-T-GTA
i Cacajao_melanocephalus.k141_619699                     I 19 C 0
s Callibella_humilis.k141_1233062                            10525 7 +     18648 ATG-T-GCA
i Callibella_humilis.k141_1233062                        I 19 C 0
s Callimico_goeldii.k141_1609886                             10060 7 -     13885 ATG-T-GCA
i Callimico_goeldii.k141_1609886                         I 19 C 0
s Callithrix_geoffroyi.k119_459277                            2130 7 -      8861 ATG-T-GCA
i Callithrix_geoffroyi.k119_459277                       I 19 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454522 7 + 189096842 ATG-T-GCA
i Callithrix_jacchus.pat_scaffold_3                      I 19 C 0
s Callithrix_kuhlii.k119_102356                               2045 7 +      8664 ATG-T-GCA
i Callithrix_kuhlii.k119_102356                          I 19 C 0
s Camelus_bactrianus.KN276810.1                            7631352 7 +  17673402 ata-t-gca
i Camelus_bactrianus.KN276810.1                          I 20 C 0
s Camelus_dromedarius.KN272107.1                           4665638 7 +   7040546 ata-t-gca
i Camelus_dromedarius.KN272107.1                         I 20 C 0
s Camelus_ferus.KB017975.1                                 1209298 7 +   1652518 ata-t-gca
i Camelus_ferus.KB017975.1                               I 20 C 0
s CanFam4.chr16                                           42505723 7 +  60362399 GGA-T-ACA
i CanFam4.chr16                                          I 19 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9359 7 -     23171 GGA-T-ACA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 19 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222702 7 +   9314153 GGA-T-ACA
i Canis_lupus_dingo.QKWQ01000480.1                       I 19 C 0
s Canis_lupus_familiaris.chr16                            41615837 7 +  59632846 GGA-T-ACA
i Canis_lupus_familiaris.chr16                           I 19 C 0
s Canis_lupus_orion.HG994398.1                            45107418 7 -  63665305 GGA-T-ACA
i Canis_lupus_orion.HG994398.1                           I 19 C 0
s Capra_aegagrus.CM003241.1                               27409418 7 -  46296322 GTA-T-GAA
i Capra_aegagrus.CM003241.1                              I 19 C 0
s Capra_hircus.CM004588.1                                 26591692 7 +  44709034 GTA-T-GAA
i Capra_hircus.CM004588.1                                I 19 C 0
s Capromys_pilorides.CapPil_scaffold_652123                   1874 6 -      1880 ATG-T-GC-
i Capromys_pilorides.CapPil_scaffold_652123              I 20 N 0
s Carlito_syrichta.NW_007259797.1                           270806 7 +    496798 ATA-C-TTA
i Carlito_syrichta.NW_007259797.1                        I 19 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                613 7 +      9923 ACA-T-GCA
i Carollia_perspicillata.CarPer_scaffold_107871          I 19 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28010 5 -     39886 A---T-GCA
i Castor_canadensis.CasCan_scaffold_39952                I 19 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79892 7 -    217609 ATG-T-GCA
i Catagonus_wagneri.CatWag_scaffold_2839                 I 19 C 0
s Cavia_aperea.AVPZ01000300.1                              4996755 7 +  23392119 ATG-T-ACA
i Cavia_aperea.AVPZ01000300.1                            I 20 C 0
s Cavia_porcellus.DS562891.1                               5000196 7 +  23407841 ATG-T-ACA
i Cavia_porcellus.DS562891.1                             I 20 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63277 7 -     66877 ATG-T-ACA
i Cavia_tschudii.CavTsc_scaffold_23560                   I 20 C 0
s Cebuella_niveiventris.k141_592277                           5443 7 -     12580 ATG-T-GCA
i Cebuella_niveiventris.k141_592277                      I 19 C 0
s Cebuella_pygmaea.k141_145798                               43501 7 +     53515 ATG-T-GCA
i Cebuella_pygmaea.k141_145798                           I 19 C 0
s Cebus_albifrons.Contig27                                  371429 7 -  26074798 ATG-T-GCA
i Cebus_albifrons.Contig27                               I 19 C 0
s Cebus_olivaceus.k141_1404781                                8318 7 -     34880 ATG-T-GCA
i Cebus_olivaceus.k141_1404781                           I 19 C 0
s Cebus_unicolor.k141_1654760                                67413 7 -     89041 ATG-T-GCA
i Cebus_unicolor.k141_1654760                            I 19 C 0
s Cephalopachus_bancanus.k141_1689090                         2766 7 -      5494 ATA-C-ACA
i Cephalopachus_bancanus.k141_1689090                    I 19 C 0
s Ceratotherium_simum.JH767749.1                          15492526 7 -  27778364 GTA-T-GCA
i Ceratotherium_simum.JH767749.1                         I 19 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19359 7 +     27315 GTA-T-GCA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 19 C 0
s Cercocebus_atys.KQ010504.1                                141625 7 -   4669795 ACG-T-GCA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45368 7 +     47900 ACG-T-GCA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            797 7 -     14410 ACG-T-GCA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45181 7 -    148725 ACG-T-GCA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27383 7 -     40656 ACG-T-GCA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7347 7 +     20796 ACG-T-GCA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12465 7 -     17524 ACG-T-GCA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28192 7 -     34525 ACG-T-GCA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11968 7 -     25376 ACG-T-GCA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364562 7 -  39242232 ACG-T-GCA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270282 7 +  21565898 ACG-T-GCA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32650 7 -     45857 ACG-T-GCA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27551 7 -     32606 ACG-T-GCA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3713 7 +      8499 ACG-T-GCA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26109 7 +     70610 ACG-T-GCA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23077 7 +     36323 ACG-T-GCA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13044 7 -     19938 ATA-T-GCA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 18 C 0
s Cheirogaleus_major.k141_666340                             30970 7 -     33796 GTG-T-GCA
i Cheirogaleus_major.k141_666340                         I 19 C 0
s Cheirogaleus_medius.k141_759766                             5487 7 -     15404 GTG-T-GCA
i Cheirogaleus_medius.k141_759766                        I 19 C 0
s Cheracebus_lucifer.k141_2312002                             9319 7 -     32913 ATG-T-GCA
i Cheracebus_lucifer.k141_2312002                        I 19 C 0
s Cheracebus_lugens.k141_1179667                             19732 7 -     40346 ATG-T-GCA
i Cheracebus_lugens.k141_1179667                         I 19 C 0
s Cheracebus_regulus.k141_471822                             19987 7 +    216457 ATG-T-GCA
i Cheracebus_regulus.k141_471822                         I 19 C 0
s Cheracebus_torquatus.k141_890198                           19780 7 +     39636 ATG-T-GCA
i Cheracebus_torquatus.k141_890198                       I 19 C 0
s Chinchilla_lanigera.JH722012.1                           1239111 7 -   2543920 ATG-T-AAA
i Chinchilla_lanigera.JH722012.1                         I 20 C 0
s Chiropotes_albinasus.k141_1946120                           4375 7 +      5346 ACG-T-GCA
i Chiropotes_albinasus.k141_1946120                      I 19 C 0
s Chiropotes_israelita.k141_313004                           42850 7 -    112038 ATG-T-GTA
i Chiropotes_israelita.k141_313004                       I 19 C 0
s Chiropotes_sagulatus.k141_1113111                           8421 7 +     34062 ATG-T-GTA
i Chiropotes_sagulatus.k141_1113111                      I 19 C 0
s Chlorocebus_aethiops.ctg25                                343971 7 +  18827391 ACG-T-GCA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10519 7 -     44032 ACG-T-GCA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305296 7 - 135778131 ACG-T-GCA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15161 7 +     15858 ATA-T-GCA
i Choloepus_didactylus.ChoDid_scaffold_70559             I 19 C 0
s Choloepus_hoffmanni.KN194906.1                            606736 7 -    839153 TTA-T-GCA
i Choloepus_hoffmanni.KN194906.1                         I 19 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1159 4 +      2406 ----T-GAA
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          I 22 C 0
s Colobus_angolensis.KN981557.1                             409701 7 -   2368649 ACG-T-GCA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379582 7 - 200372422 ACG-T-GCA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3139 7 -     84244 ACG-T-GCA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807587 7 +  53390261 ATA-T-GCA
i Condylura_cristata.JH655891.1                          I 18 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3119 7 -      8242 ATA-T-GCA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 19 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44630 7 -     83289 CTT-T-GTA
i Cricetomys_gambianus.CriGam_scaffold_14425             I 18 C 0
s Cricetulus_griseus.LT883664.1                          213115202 7 - 224834208 CTG-T-GTA
i Cricetulus_griseus.LT883664.1                          I 19 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9752 7 +     12657 GTG-T-GCA
i Crocidura_indochinensis.CroInd_scaffold_77846          I 18 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4696 7 +     87169 GTA-T-GCA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 19 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645325 8 -   1526836 ACTGT-GAA
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 24 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18665 7 +     50838 ATG-T-GAA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 16 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4672 7 +     36344 ATG-T-GCA
i Cuniculus_paca.CunPac_flattened_line_7025              I 20 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28448 7 +     75252 ATG-T-GCA
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 20 C 0
s Dasypus_novemcinctus.JH564415.1                          2110396 7 -   2246927 TTA-T-GCA
i Dasypus_novemcinctus.JH564415.1                        I 18 C 0
s Daubentonia_madagascariensis.ctg71                        292906 7 +  12879189 ATG-T-GCA
i Daubentonia_madagascariensis.ctg71                     I 19 C 0
s Delphinapterus_leucas.KZ290073.1                        18632246 7 -  35494412 ATA-T-GCA
i Delphinapterus_leucas.KZ290073.1                       I 19 C 0
s Desmodus_rotundus.KZ672366.1                              330809 7 -   2620052 ACA-T-GCA
i Desmodus_rotundus.KZ672366.1                           I 19 I 26
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664810 7 -   1390856 GTA-T-GCA
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 19 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139603 7 -    198055 GTA-T-GCA
i Diceros_bicornis.DicBicMic_scaffold_5955               I 19 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99199 7 -    115145 ATG-T-GCA
i Dinomys_branickii.DinBra_scaffold_10381                I 20 C 0
s Dipodomys_ordii.KN672350.1                              18950824 7 -  37912305 GTG-T-GCA
i Dipodomys_ordii.KN672350.1                             I 14 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5749 7 -     10735 GTG-T-GCA
i Dipodomys_stephensi.DipSte_scaffold_89095              I 14 C 0
s Eidolon_helvum.AWHC01266696.1                               6583 7 +     19438 ata-t-gca
i Eidolon_helvum.AWHC01266696.1                          I 19 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240058 7 -    607251 GTA-T-GAA
i Elaphurus_davidianus.JRFZ01104969.1                    I 19 C 0
s Elephantulus_edwardii.JH947257.1                         9109229 4 -  10337057 ----T-GAA
i Elephantulus_edwardii.JH947257.1                       I 22 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31349 6 +    110024 -TG-T-GTA
i Ellobius_lutescens.LOEQ01008920.1                      I 18 C 0
s Ellobius_talpinus.LOJH01026522.1                           13320 6 +     18970 -TG-T-GTA
i Ellobius_talpinus.LOJH01026522.1                       I 18 C 0
s Enhydra_lutris.KZ291758.1                               24916454 7 +  41312741 GTA-T-ACA
i Enhydra_lutris.KZ291758.1                              I 20 C 0
s Eptesicus_fuscus.JH977646.1                             12579228 7 +  14770903 GCA-A-GCG
i Eptesicus_fuscus.JH977646.1                            I 19 C 0
s Equus_asinus.JREZ01000139.1                              3041687 7 -   4378816 CTG-T-GCA
i Equus_asinus.JREZ01000139.1                            I 19 C 0
s Equus_caballus.CM000403.2                               21375625 7 +  39960074 CTG-T-GCA
i Equus_caballus.CM000403.2                              I 19 C 0
s Equus_przewalskii.ATBW01110277.1                            1006 7 -      1194 CTG-T-GCA
i Equus_przewalskii.ATBW01110277.1                       I 29 C 0
s Erinaceus_europaeus.JH835339.1                           3666393 7 +   7059049 ATG-T-TAA
i Erinaceus_europaeus.JH835339.1                         I 19 I 2
s Erythrocebus_patas.Contig38                               263509 7 +  21539334 ACG-T-GCA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71455 7 -    133382 TTA-T-GCA
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 19 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202              999 7 -      1170 TTA-T-GCA
i Eubalaena_japonica.EubJap_flattened_line_247202        I 19 C 0
s Eulemur_albifrons.k141_51491                               15115 7 -     24895 ATG-T-GCA
i Eulemur_albifrons.k141_51491                           I 15 C 0
s Eulemur_collaris.k141_601111                               42825 7 -     70999 ATG-T-GCA
i Eulemur_collaris.k141_601111                           I 15 C 0
s Eulemur_coronatus.k141_384460                              86795 7 +    112731 ATG-T-GCA
i Eulemur_coronatus.k141_384460                          I 15 C 0
s Eulemur_flavifrons.k141_433119                             43358 7 +     68309 ATG-T-GCA
i Eulemur_flavifrons.k141_433119                         I 15 C 0
s Eulemur_fulvus.k141_636316                                 53682 7 -     65740 ATG-T-GCA
i Eulemur_fulvus.k141_636316                             I 15 C 0
s Eulemur_macaco.k141_1562045                                24314 7 -     75513 ATG-T-GCA
i Eulemur_macaco.k141_1562045                            I 15 C 0
s Eulemur_mongoz.k141_232305                                 48509 7 -     97555 ATG-T-CCA
i Eulemur_mongoz.k141_232305                             I 15 C 0
s Eulemur_rubriventer.k141_1423786                            5233 7 +     30972 ATG-T-GCA
i Eulemur_rubriventer.k141_1423786                       I 15 C 0
s Eulemur_rufus.k141_514691                                  42953 7 -     52037 ATG-T-GCA
i Eulemur_rufus.k141_514691                              I 15 C 0
s Eulemur_sanfordi.k141_1122526                              59356 7 -    111500 ATG-T-GCA
i Eulemur_sanfordi.k141_1122526                          I 15 C 0
s Felis_catus.CM001381.2                                 186247153 7 - 206538554 GTA-G-GCA
i Felis_catus.CM001381.2                                 I 19 C 0
s Felis_catus_fca126.CM031415.1                          185116939 7 - 205367284 GTA-G-GCA
i Felis_catus_fca126.CM031415.1                          I 19 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28036 7 -     30238 GTA-A-GCA
i Felis_nigripes.FelNig_flattened_line_31944             I 19 C 0
s Fukomys_damarensis.KN121974.1                            2916753 7 -   3816255 ATG-T-GCA
i Fukomys_damarensis.KN121974.1                          I 20 C 0
s Galago_moholi.ctg3793                                     125991 7 -    137831 ATG-T-GCA
i Galago_moholi.ctg3793                                  I 645 C 0
s Galago_senegalensis.k141_991736                             9536 7 +     22493 ATG-T-GCA
i Galago_senegalensis.k141_991736                        I 645 C 0
s Galagoides_demidoff.k141_561628                            21607 7 -     32986 ATG-T-GCA
i Galagoides_demidoff.k141_561628                        I 645 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1498 7 -     28519 ATT-T-GCA
i Galeopterus_variegatus.GalVar_scaffold_51812           I 19 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91761 7 -     95226 GTA-T-GAA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 19 C 0
s Glis_glis.GliGli_scaffold_33859                            34821 7 -     36801 ATG-T-GCA
i Glis_glis.GliGli_scaffold_33859                        I 15 C 0
s Gorilla_beringei.k141_3358147                               6131 7 -      8343 ACG-T-GCA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255146 7 - 186649187 ACG-T-GCA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2321 7 -     78134 CTT-T-GCA
i Graphiurus_murinus.GraMur_scaffold_10447               I 19 C 0
s Hapalemur_alaotrensis.k141_330369                          15040 7 -     40692 ATG-T-GCA
i Hapalemur_alaotrensis.k141_330369                      I 15 C 0
s Hapalemur_gilberti.k141_646465                             36442 7 +     49394 ATG-T-GCA
i Hapalemur_gilberti.k141_646465                         I 15 C 0
s Hapalemur_griseus.k141_763500                              61310 7 -     66874 ATG-T-GCA
i Hapalemur_griseus.k141_763500                          I 15 C 0
s Hapalemur_meridionalis.k141_258450                         10184 7 -     42923 AGG-T-GCA
i Hapalemur_meridionalis.k141_258450                     I 15 C 0
s Hapalemur_occidentalis.k141_578367                         17183 7 -     53142 ATG-T-GCA
i Hapalemur_occidentalis.k141_578367                     I 15 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31129 7 -    327341 GTA-T-GCA
i Helogale_parvula.HelPar_flattened_line_2585            I 19 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9436 7 +     48891 GTA-T-GAA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 19 C 0
s Heterocephalus_glaber.JH602082.1                         1932729 7 -  22651954 ATG-T-GCA
i Heterocephalus_glaber.JH602082.1                       I 20 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                1395 6 +      4291 GTA-G-T-G
i Heterohyrax_brucei.HetBruBak_scaffold_154059           I 19 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7959 7 -     36432 ATA-T-GCA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 19 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551940 7 -   1711038 GTA-T-GCA
i Hipposideros_armiger.JXIK01000431.1                    I 19 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1379 7 -      2730 GTA-T-GCA
i Hipposideros_galeritus.HipGal_scaffold_164997          I 19 C 0
s Hoolock_leuconedys.ctg274                                    143155 7 -    630532 ATG-T-GCA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70293 7 +     83186 GTA-T-GCA
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 19 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72192 7 +    143317 ATG-T-GCA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 20 C 0
s Hylobates_agilis.k141_1155965                               6189 7 +     12352 ATG-T-GCA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13373 7 +     55766 ATG-T-GCA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052973 7 + 191637585 ATG-T-GCA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801851 7 +  11177569 ATG-T-GCA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7477 7 -    135385 ATG-T-ACA
i Hystrix_cristata.HysCri_scaffold_5660                  I 21 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387173 7 +   7955117 ACA-T-GCA
i Ictidomys_tridecemlineatus.JH393364.1                  I 19 C 0
s Indri_indri.k141_2415743                                    2741 7 +     11955 TTG-T-GCA
i Indri_indri.k141_2415743                               I 19 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10347 7 -     16823 ATA-T-GCA
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 19 C 0
s Jaculus_jaculus.JH725527.1                               1240214 7 +   9596543 ATG-T-GAA
i Jaculus_jaculus.JH725527.1                             I 19 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72190 7 -     97402 ATA-T-GCA
i Kogia_breviceps.KogBre_flattened_line_3970             I 19 C 0
s Lagothrix_lagothricha.k141_246028                          43595 7 +    110728 ATG-T-GCA
i Lagothrix_lagothricha.k141_246028                      I 19 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    32474 7 -     49555 GTA-A-GTG
i Lasiurus_borealis.LasBor_scaffold_26245                I 36 I 136
s Lemur_catta.scaffold_24                                 14759833 7 +  30322482 ATG-T-GCA
i Lemur_catta.scaffold_24                                I 15 C 0
s Leontocebus_fuscicollis.k141_2994775                        4509 7 -     13097 ATG-T-GCA
i Leontocebus_fuscicollis.k141_2994775                   I 19 C 0
s Leontocebus_illigeri.k141_2951200                           4263 7 +      5940 ATG-T-GCA
i Leontocebus_illigeri.k141_2951200                      I 19 C 0
s Leontocebus_nigricollis.k141_3905062                        4093 7 -      5717 ATG-T-GCA
i Leontocebus_nigricollis.k141_3905062                   I 19 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10465 7 -     11567 ATG-T-GCA
i Leontopithecus_chrysomelas.k141_1327670                I 19 C 0
s Leontopithecus_rosalia.k141_349454                         11846 7 -     12945 ATG-T-GCA
i Leontopithecus_rosalia.k141_349454                     I 19 C 0
s Lepilemur_ankaranensis.k141_567626                          9347 7 +     29618 GTG-T-GCA
i Lepilemur_ankaranensis.k141_567626                     I 19 C 0
s Lepilemur_dorsalis.k141_387009                              9343 7 +     31569 GTG-T-GCA
i Lepilemur_dorsalis.k141_387009                         I 19 C 0
s Lepilemur_ruficaudatus.k141_330196                          9353 7 +     24756 GTG-T-GCA
i Lepilemur_ruficaudatus.k141_330196                     I 19 C 0
s Lepilemur_septentrionalis.k141_360456                       9353 7 +     16388 GTG-T-GCA
i Lepilemur_septentrionalis.k141_360456                  I 19 C 0
s Leptonychotes_weddellii.KB714746.1                        813830 7 -   3914936 GTA-T-ACA
i Leptonychotes_weddellii.KB714746.1                     I 19 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18204 7 +     24238 ATG-T-GCA
i Lepus_americanus.LepAme_scaffold_56121                 I 19 C 0
s Lipotes_vexillifer.KE559953.1                             341532 7 +    662738 ATA-T-GCA
i Lipotes_vexillifer.KE559953.1                          I 19 C 0
s Lophocebus_aterrimus.ctg367                               334510 7 -   1826925 ACG-T-GCA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11692 7 +     19643 ATG-T-GCA
i Loris_lydekkerianus.k141_2031736                       I 780 C 0
s Loris_tardigradus.ctg83                                  5045362 7 -   6120653 ATG-T-GCA
i Loris_tardigradus.ctg83                                I 787 C 0
s Loxodonta_africana.GL010049.1                           39082030 6 +  43346337 ATA-T-G-A
i Loxodonta_africana.GL010049.1                          I 19 C 0
s Lycaon_pictus.CM007581.1                                41614992 7 +  59628241 GGA-T-ACA
i Lycaon_pictus.CM007581.1                               I 19 C 0
s Macaca_arctoides.k141_1757516                              45905 7 -     61512 ACA-T-GCA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373567 7 -  60120075 ACA-T-GCA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25829 7 +     30207 ACG-T-GCA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             667 7 -      5035 ACG-T-GCA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25782 7 +     30527 ACG-T-GCA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36958 7 -     50087 ACG-T-GCA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46702 7 +     51645 ACG-T-GCA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415905 7 - 187317192 ACG-T-GCA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400135 7 +  25927173 ACG-T-GCA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49307 7 -     62418 ACG-T-GCA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1844 7 +     14901 ACG-T-GCA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45779 7 +     59329 ACG-T-GCA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271687 7 +    668171 ACG-T-GCA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   331 7 -      5049 ACG-T-GCA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3485 7 +     17132 ACG-T-GCA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223554 7 -    270270 ATA-T-ACA
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 20 C 0
s Mandrillus_leucophaeus.scaffold280                        322975 7 +  24302211 ACG-T-GCA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357806 7 -    752769 ACG-T-GCA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673880 7 -    737560 ATA-T-GTG
i Manis_javanica.JSZB01003497.1                          I 19 C 0
s Manis_pentadactyla.KN006162.1                             221176 7 +    317179 ATA-T-GTG
i Manis_pentadactyla.KN006162.1                          I 19 C 0
s Marmota_marmota.CZRN01000018.1                           7501392 7 +  40650429 ACA-T-GCA
i Marmota_marmota.CZRN01000018.1                         I 19 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150724 7 +    207569 GTA-T-GCA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 18 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50483 7 -    140813 CTG-T-TCA
i Meriones_unguiculatus.MerUng_scaffold_7390             I 18 C 0
s Mesocricetus_auratus.KB708134.1                         17429586 7 +  29670104 CTG-T-GTA
i Mesocricetus_auratus.KB708134.1                        I 19 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87816 7 +     93471 ATA-C-GCA
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 19 C 0
s Mico_argentatus.k141_582562                                10632 7 +     17804 ATG-T-GCA
i Mico_argentatus.k141_582562                            I 19 C 0
s Mico_humeralifer.k141_1180625                              11132 7 -     12984 ATG-T-GCA
i Mico_humeralifer.k141_1180625                          I 19 C 0
s Mico_schneideri.k141_1877700                                     19448 7 -     26561 ATG-T-GCA
i Mico_schneideri.k141_1877700                                 I 19 C 0
s Microcebus_murinus.CM007674.1                           74985183 7 +  93316391 GTG-T-GCA
i Microcebus_murinus.CM007674.1                          I 19 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46519 4 +    145209 ----T-GAA
i Microgale_talazaci.MicTal_scaffold_6613                I 19 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185413 7 +    200668 CTA-T-GCA
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 19 C 0
s Microtus_ochrogaster.CM001695.1                         15962789 6 +  27267610 -TG-T-GTA
i Microtus_ochrogaster.CM001695.1                        I 18 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363576 7 -   8254450 ACA-T-GCA
i Miniopterus_natalensis.LDJU01000034.1                  I 19 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42483 7 -     48117 ACA-T-GCA
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 19 C 0
s Miopithecus_ogouensis.k141_1534655                         23009 7 -     27822 ACG-T-GCA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8841 7 +     27589 GTA-T-ACA
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 19 C 0
s Mirza_zaza.k141_766280                                     52966 7 -     62432 GTG-T-GCA
i Mirza_zaza.k141_766280                                 I 15 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359921 7 +    437263 ATA-T-GCA
i Monodon_monoceros.MonMon_M_scaffold_103                I 19 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179641 7 +    366855 ATA-T-GCA
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 19 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25883 7 -     82753 GTA-T-GAA
i Moschus_moschiferus.MosMos_scaffold_13123              I 19 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18880 7 -     63510 GTA-T-GCA
i Mungos_mungo.MunMun_flattened_line_18455               I 19 C 0
s Murina_feae.MurFea_scaffold_17764                          39541 7 +     47283 GTA-A-GTG
i Murina_feae.MurFea_scaffold_17764                      I 19 C 0
s Mus_caroli.LT608237.1                                   35593507 7 + 120012414 CTG-T-GCA
i Mus_caroli.LT608237.1                                  I 18 C 0
s Mus_musculus.chr8                                       41687896 7 + 129401213 CTG-T-GCA
i Mus_musculus.chr8                                      I 19 C 0
s Mus_spretus.CM004101.1                                  39497189 7 + 130317789 CTG-T-GCA
i Mus_spretus.CM004101.1                                 I 19 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83877 7 -     86153 ATT-T-GTA
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 19 C 0
s Mustela_putorius.JH418006.1                             14355476 7 +  14710649 GTA-T-ACA
i Mustela_putorius.JH418006.1                            I 20 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63450 7 +     67721 ATG-T-GTA
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 16 C 0
s Myotis_brandtii.KE162005.1                               9793829 7 +  10118263 GTA-A-GTG
i Myotis_brandtii.KE162005.1                             I 19 C 0
s Myotis_davidii.KB100139.1                                4387960 7 +   6019432 GTA-A-CTG
i Myotis_davidii.KB100139.1                              I 19 C 0
s Myotis_lucifugus.GL429869.1                               383788 7 +   4330536 GTA-A-GTG
i Myotis_lucifugus.GL429869.1                            I 19 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2597 7 +     18357 GTA-A-GTG
i Myotis_myotis.MyoMyo_scaffold_66571                    I 19 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120126 7 +    130748 ATA-T-GCA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 19 C 0
s Nannospalax_galili.KL204047.1                             946633 7 +   3037898 CTG-T-GCC
i Nannospalax_galili.KL204047.1                          I 19 C 0
s Nasalis_larvatus.k141_1350636                              29658 7 +     34575 ACG-T-GCA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232599 7 -   7148211 ATA-T-GCA
i Neophocaena_asiaeorientalis.KZ687982.1                 I 19 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128609 7 -    149072 ATA-C-GTA
i Noctilio_leporinus.NocLep_scaffold_7894                I 19 C 0
s Nomascus_annamensis.k141_1771965                           54081 7 -    132029 ATG-T-GCA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10176 7 -     16345 ATG-T-GCA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16061 7 +     22201 ATG-T-GCA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414282 7 -  22158432 ATG-T-GCA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26459 7 -     54323 ATG-T-GCA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198588 7 +   9404916 GGA-T-ACA
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 19 C 0
s Nycticebus_bengalensis.LG01                             93638592 7 + 196305487 AGG-T-GCA
i Nycticebus_bengalensis.LG01                            I 1652 C 0
s Nycticebus_coucang.k141_1296080                             1195 7 -      9413 AGG-T-GCA
i Nycticebus_coucang.k141_1296080                        N 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93565972 7 - 199412804 AGG-T-GCA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 773 C 0
s Ochotona_princeps.JH802162.1                             2557264 7 -   3988456 aag-t-aaa
i Ochotona_princeps.JH802162.1                           I 19 C 0
s Octodon_degus.JH651603.1                                11055403 7 -  11899542 ATG-T-GCA
i Octodon_degus.JH651603.1                               I 16 C 0
s Odobenus_rosmarus.KB229312.1                             1452050 7 +   2017862 GTA-T-ACA
i Odobenus_rosmarus.KB229312.1                           I 19 C 0
s Odocoileus_virginianus.KZ100018.1                         436651 7 -    630418 GCA-T-GAA
i Odocoileus_virginianus.KZ100018.1                      I 19 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14644 7 +    150152 GTA-T-GAA
i Okapia_johnstoni.LVCL01S0005463.1                      I 19 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93146 6 -    140218 -TG-T-GTA
i Ondatra_zibethicus.OndZib_scaffold_7387                I 18 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4025 7 -     41509 CTG-T-GTA
i Onychomys_torridus.OnyTor_scaffold_28377               I 19 C 0
s Orcinus_orca.KB316932.1                                  8102989 7 +  10937097 ata-t-gca
i Orcinus_orca.KB316932.1                                I 19 C 0
s Orycteropus_afer.OryAfe_flattened_line_1597630               345 7 -       378 ATA-T-AAA
i Orycteropus_afer.OryAfe_flattened_line_1597630         I 221 C 0
s Oryctolagus_cuniculus.CM000791.1                       107103998 7 - 174332312 ATG-T-ACA
i Oryctolagus_cuniculus.CM000791.1                       I 19 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39633 7 +    559221 GGA-T-ACA
i Otocyon_megalotis.JAEUCK010005147.1                    I 19 C 0
s Otolemur_crassicaudatus.k141_649260                        41137 7 -     51505 ATG-T-GCA
i Otolemur_crassicaudatus.k141_649260                    I 644 C 0
s Otolemur_garnettii.GL873799.1                             354141 7 +   1103335 ATG-T-GCA
i Otolemur_garnettii.GL873799.1                          I 645 C 0
s Ovis_aries.CM001607.2                                   26404556 7 -  44047080 GTA-T-GAA
i Ovis_aries.CM001607.2                                  I 19 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5075 7 +     17875 GTA-T-GAA
i Ovis_canadensis.OviCan_scaffold_67953                  I 19 C 0
s Pan_troglodytes.CM009242.2                               1473175 7 - 189151597 ATG-T-GCA
i Pan_troglodytes.CM009242.2                             I 13 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24859 7 -    230217 GTA-A-GCA
i Panthera_onca.PanOnc_flattened_line_3271               I 19 C 0
s Panthera_pardus.KV860321.1                              18462185 7 -  18783137 GTA-A-GCA
i Panthera_pardus.KV860321.1                             I 19 C 0
s Panthera_tigris.KE722367.1                               3972844 7 +   8748460 GTA-A-GCA
i Panthera_tigris.KE722367.1                             I 19 C 0
s Pantholops_hodgsonii.KE114653.1                          1616084 7 +   2937107 GTA-T-GAA
i Pantholops_hodgsonii.KE114653.1                        I 19 C 0
s Papio_anubis.CM001495.2                                   243807 7 - 183742232 ACA-T-GCA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10269 7 +     21308 ATG-T-GCA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292842 7 -  20919399 ACA-T-GCA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22917 7 -     27687 ACG-T-GCA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16063 7 +     16796 ACA-T-GCA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22874 7 -     23640 ACA-T-GCA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15456 7 +     78924 ATA-T-GCA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 19 C 0
s Perodicticus_ibeanus.k141_1921260                          27473 7 +     31479 ATG-T-GCA
i Perodicticus_ibeanus.k141_1921260                      I 782 C 0
s Perodicticus_potto.k141_1854441                            19842 7 -     24908 ATG-T-GCA
i Perodicticus_potto.k141_1854441                        I 781 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2177 7 +      9367 GTG-C-ACA
i Perognathus_longimembris.PerPac_flattened_line_89005   I 19 C 0
s Peromyscus_maniculatus.KI615324.1                         247222 7 +  18517816 CTG-T-GTA
i Peromyscus_maniculatus.KI615324.1                      I 19 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32317 7 -     56120 ATG-T-GCA
i Petromus_typicus.PetTyp_scaffold_17301                 I 20 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4515 7 -     63832 ATA-T-GCA
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 19 C 0
s Piliocolobus_badius.k141_2704958                            3093 7 +     55023 ATG-T-GGA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2631 7 -     89929 ATG-T-GGA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3221 7 +     40849 ATG-T-GGA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254895 7 +  14605196 ATG-T-GGA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4136 7 +     22231 GTA-A-GCG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 19 I 241
s Pithecia_albicans.k141_1239476                             65217 7 +    207309 ATG-T-GTA
i Pithecia_albicans.k141_1239476                         I 19 C 0
s Pithecia_chrysocephala.k141_785207                          6309 7 -     25401 GTG-T-GTA
i Pithecia_chrysocephala.k141_785207                     I 19 C 0
s Pithecia_hirsuta.k141_640380                               32053 7 +     58159 ATG-T-GTA
i Pithecia_hirsuta.k141_640380                           I 19 C 0
s Pithecia_mittermeieri.k141_1280039                         32329 7 +     63561 ATG-T-GTA
i Pithecia_mittermeieri.k141_1280039                     I 19 C 0
s Pithecia_pissinattii.k141_878371                           32089 7 +     51148 ATG-T-GTA
i Pithecia_pissinattii.k141_878371                       I 19 C 0
s Pithecia_pithecia.tarseq_165                              557059 7 -   4542175 GTG-T-GTA
i Pithecia_pithecia.tarseq_165                           I 19 C 0
s Pithecia_vanzolinii.k141_1369553                           32073 7 +     51125 ATG-T-GTA
i Pithecia_vanzolinii.k141_1369553                       I 19 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1513 7 +     19503 ATA-T-GCA
i Platanista_gangetica.PlaMin_flattened_line_83166       I 19 C 0
s Plecturocebus_bernhardi.k141_2549090                        8484 7 +     39866 ATG-T-GCA
i Plecturocebus_bernhardi.k141_2549090                   I 19 C 0
s Plecturocebus_brunneus.k141_862875                          3566 7 -      9282 ATG-T-GCA
i Plecturocebus_brunneus.k141_862875                     I 19 C 0
s Plecturocebus_caligatus.k141_1382851                       42970 7 -     87950 ATG-T-GCA
i Plecturocebus_caligatus.k141_1382851                   I 19 C 0
s Plecturocebus_cinerascens.k141_1164729                     43366 7 -     88961 ATG-T-GCA
i Plecturocebus_cinerascens.k141_1164729                 I 19 C 0
s Plecturocebus_cupreus.k141_2351393                          8062 7 -     39403 ATG-T-GCA
i Plecturocebus_cupreus.k141_2351393                     I 19 C 0
s Plecturocebus_dubius.k141_1058799                          43013 7 +     87928 ATG-T-GCA
i Plecturocebus_dubius.k141_1058799                      I 19 C 0
s Plecturocebus_grovesi.k141_2013005                          8061 7 -     60166 ATG-T-GCA
i Plecturocebus_grovesi.k141_2013005                     I 19 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      14998 7 -     67232 ATG-T-GCA
i Plecturocebus_hoffmannsi.k141_3303950                  I 19 C 0
s Plecturocebus_miltoni.k141_349282                          42914 7 -     90634 ATG-T-GCA
i Plecturocebus_miltoni.k141_349282                      I 19 C 0
s Plecturocebus_moloch.k141_1031110                          44381 7 +     89403 ATG-T-GCA
i Plecturocebus_moloch.k141_1031110                      I 19 C 0
s Pongo_abelii.CM009266.2                                   178284 7 - 189387572 ATG-T-GCA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193101 7 -   9816681 ATG-T-GCA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28238 7 +     69807 ACG-T-GCA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45419 7 -     80239 ACG-T-GCA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 1220 6 +      7663 GCA-G-T-G
i Procavia_capensis.ProCapCap_scaffold_165387            I 19 C 0
s Prolemur_simus.MPIZ01000396.1                            1982981 7 +   4620579 ATG-T-GCA
i Prolemur_simus.MPIZ01000396.1                          I 15 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566492 7 -   2598838 ATG-T-GCC
i Propithecus_coquerelli.NW_012148875.1                  I 19 C 0
s Propithecus_coronatus.k141_209299                           4130 7 -      7103 ATG-T-GCC
i Propithecus_coronatus.k141_209299                      I 19 C 0
s Propithecus_diadema.k141_153680                             4727 7 -     11706 ATG-T-GCC
i Propithecus_diadema.k141_153680                        I 19 C 0
s Propithecus_edwardsi.k141_635656                            8465 7 -     30655 ATG-T-GCC
i Propithecus_edwardsi.k141_635656                       I 19 C 0
s Propithecus_perrieri.k141_1496898                          34778 7 +     46564 ATG-T-GCC
i Propithecus_perrieri.k141_1496898                      I 19 C 0
s Propithecus_tattersalli.k141_1127767                       95057 7 -     98465 ATG-T-GCC
i Propithecus_tattersalli.k141_1127767                   I 19 C 0
s Propithecus_verreauxi.k141_1047036                          8696 7 +     35169 ATG-T-GCC
i Propithecus_verreauxi.k141_1047036                     I 19 C 0
s Psammomys_obesus.NESX01036366.1                            37826 7 +     52041 CTG-T-TCA
i Psammomys_obesus.NESX01036366.1                        I 18 C 0
s Pteronotus_parnellii.KE847780.1                            52534 7 -     66298 ATA-C-GCA
i Pteronotus_parnellii.KE847780.1                        I 19 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5049 7 -     18639 GTA-T-ACA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 20 C 0
s Pteropus_alecto.KB030862.1                               5841123 7 -  28871421 ATA-T-GCA
i Pteropus_alecto.KB030862.1                             I 19 C 0
s Pteropus_vampyrus.KN525825.1                             3537638 7 -   4952924 ATA-T-GCA
i Pteropus_vampyrus.KN525825.1                           I 19 C 0
s Puma_concolor.QAVW01001104.1                            18099502 7 +  38429054 GTA-A-GCA
i Puma_concolor.QAVW01001104.1                           I 19 C 0
s Pygathrix_cinerea.k141_1153803                             27614 7 +     91421 ACG-T-GCA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154098 7 -   7812017 ACG-T-GCA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8471 7 +     72585 ACG-T-GCA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53568 7 +     55069 GCA-T-GAA
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 19 C 0
s Rattus_norvegicus.chr16                                 37023112 7 -  90668790 CTG-T-GCA
i Rattus_norvegicus.chr16                                I 19 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915102 7 +   3329780 GTG-T-GCA
i Rhinolophus_sinicus.LVEH01000134.1                     I 19 C 0
s Rhinopithecus_bieti.k119_778604                             2192 7 +      7119 ACG-T-GCA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122808 7 + 195417433 ACG-T-GCA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237034 7 -   7961872 ACG-T-GCA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75168 7 -    116970 ACA-T-GCA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 19 C 0
s Saguinus_bicolor.k141_1429097                               4373 7 +     27962 ACG-T-GCA
i Saguinus_bicolor.k141_1429097                          I 19 C 0
s Saguinus_geoffroyi.k141_3779887                             4267 7 +      6077 ACG-T-GCA
i Saguinus_geoffroyi.k141_3779887                        I 19 C 0
s Saguinus_imperator.k141_1898058                             4357 7 +      5971 ATG-T-GCA
i Saguinus_imperator.k141_1898058                        I 19 C 0
s Saguinus_inustus.k141_2469308                               4278 7 +      5932 ATG-T-GCA
i Saguinus_inustus.k141_2469308                          I 19 C 0
s Saguinus_labiatus.k141_2380921                              2620 7 -      4390 ATG-T-GCA
i Saguinus_labiatus.k141_2380921                         I 19 C 0
s Saguinus_midas.LG03                                       392057 7 - 209938924 ACG-T-GCA
i Saguinus_midas.LG03                                    I 19 C 0
s Saguinus_mystax.k141_8077960                                4227 7 +      5979 ATG-T-GCA
i Saguinus_mystax.k141_8077960                           I 19 C 0
s Saguinus_oedipus.k141_1280589                                796 7 -     22275 ACG-T-GCA
i Saguinus_oedipus.k141_1280589                          I 19 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8244 7 +     16473 CTG-T-GAA
i Saiga_tatarica.SaiTat_scaffold_39512                   I 19 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109392 7 + 121099817 TTG-C-GCA
i Saimiri_boliviensis.NW_024100920.1                     I 19 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30959 7 -     47369 TTG-C-GCA
i Saimiri_cassiquiarensis.k141_1467335                   I 19 C 0
s Saimiri_macrodon.k141_1173117                              31345 7 -     79414 TTG-C-GCA
i Saimiri_macrodon.k141_1173117                          I 19 C 0
s Saimiri_oerstedii.k141_245838                              28036 7 -     34454 TTG-C-GCA
i Saimiri_oerstedii.k141_245838                          I 19 C 0
s Saimiri_sciureus.k141_1467173                              15437 7 -     22428 TTG-C-GCA
i Saimiri_sciureus.k141_1467173                          I 19 C 0
s Saimiri_ustus.k141_360372                                  30591 7 -     47109 TTG-C-GCA
i Saimiri_ustus.k141_360372                              I 19 C 0
s Sapajus_apella.ctg103                                     238637 7 +   5703754 ATG-T-GCA
i Sapajus_apella.ctg103                                  I 19 C 0
s Sapajus_macrocephalus.k141_796559                           8227 7 +     21866 ATG-T-GCA
i Sapajus_macrocephalus.k141_796559                      I 19 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116280 7 +    313613 ATA-T-GCA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 19 C 0
s Semnopithecus_entellus.k141_158471                         25933 7 +     27374 ACG-T-GCA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29445 7 +     58920 ACG-T-GCA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15943 7 -     45317 ACG-T-GCA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23601 7 -     42441 ACG-T-GCA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26279 7 -     29113 ACG-T-GCA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29354 7 -     48123 ACG-T-GCA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49600 7 +     77746 CTG-T-GTA
i Sigmodon_hispidus.SigHis_scaffold_20193                I 19 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864559 7 -   1910179 ACA-T-GCG
i Solenodon_paradoxus.SolPar_flattened_line_126          I 15 C 0
s Sorex_araneus.JH798187.1                                 4671687 7 +  18376816 ACG-T-GAA
i Sorex_araneus.JH798187.1                               I 18 C 0
s Spermophilus_dauricus.KZ294078.1                         1868752 7 +   3870691 ACA-T-GCA
i Spermophilus_dauricus.KZ294078.1                       I 19 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7133 7 -     97271 GTA-T-ACA
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 20 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125280 7 +    196729 GTA-T-GCA
i Suricata_suricatta.SurSur_flattened_line_6629          I 19 C 0
s Sus_scrofa.CM000828.4                                    6644151 7 +  69701581 ATG-T-GCG
i Sus_scrofa.CM000828.4                                  I 19 C 0
s Symphalangus_syndactylus.tarseq_199                       391541 7 +   1523678 ATG-T-GCA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14699 7 +     22964 ACA-T-GCA
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 19 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3117 7 +      5583 ATA-T-GTA
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 19 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192005 7 +    199430 ATA-T-GCA
i Tapirus_indicus.TapInd_scaffold_7432                   I 19 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    105975 7 -    539355 ATA-T-GCA
i Tapirus_terrestris.TapTer_scaffold_755                 I 19 C 0
s Tarsius_lariang.k141_1733899                                1039 7 +      9917 ATA-C-ACG
i Tarsius_lariang.k141_1733899                           I 19 C 0
s Tarsius_wallacei.k141_226975                                7837 7 +     20590 ATA-C-ACG
i Tarsius_wallacei.k141_226975                           I 19 C 0
s Theropithecus_gelada.CM009954.1                           353793 7 - 186847797 ACG-T-GCA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24476 7 -     33621 ATG-T-GCA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 20 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20136 7 -     31044 ATA-T-GCA
i Tolypeutes_matacus.TolMat_scaffold_31955               I 18 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480528 7 -    610378 GCA-T-GCA
i Tonatia_saurophila.TonSau_scaffold_294                 I 19 C 0
s Trachypithecus_auratus.k141_1189070                        21478 7 +     26378 ACG-T-GCA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34154 7 -     78344 ACG-T-GCA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20803 7 +     25722 ACG-T-GCA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29110 7 -     62838 ACG-T-GCA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29154 7 +     46913 ACG-T-GCA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9963 7 -     28527 ACG-T-GCA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31045 7 -     64340 ACG-T-GCA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29083 7 -     63452 ACG-T-GCA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10530 7 +     22490 ACG-T-GCA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3953 7 -      6147 ACG-T-GCA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10866 7 -     13050 ACG-T-GCA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256096 7 -   6242583 ACG-T-GCA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2124 7 +     19340 ACG-T-GCA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173856 7 -    200418 GTA-T-GAA
i Tragulus_javanicus.TraJav_scaffold_3462                I 19 C 0
s Trichechus_manatus.JH594705.1                            6480848 6 -  10818551 ATA-T-G-A
i Trichechus_manatus.JH594705.1                          I 19 C 0
s Tupaia_chinensis.KB320699.1                              1834782 7 -   4065304 ACA-T-GCA
i Tupaia_chinensis.KB320699.1                            I 19 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8799 7 -     70247 ACA-T-GCA
i Tupaia_tana.TupTan_flattened_line_394                  I 19 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366102 7 -  33153633 ATA-T-GCA
i Tursiops_truncatus.MRVK01000835.1                      I 19 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4017 1 -     21056 A--------
i Uropsilus_gracilis.UroGra_scaffold_46687               I 19 C 0
s Ursus_maritimus.KK499267.1                                182219 7 +   5085361 GTA-T-ACA
i Ursus_maritimus.KK499267.1                             I 19 C 0
s Varecia_rubra.k141_787544                                  25633 7 -     30710 ATG-T-GCA
i Varecia_rubra.k141_787544                              I 19 C 0
s Varecia_variegata.k141_289850                              24540 7 -    147434 ATG-T-GCA
i Varecia_variegata.k141_289850                          I 19 C 0
s Vicugna_pacos.KN270157.1                                   76686 7 +   5488506 ata-t-gca
i Vicugna_pacos.KN270157.1                               I 21 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105354 7 -    112863 GGA-T-ACA
i Vulpes_lagopus.VulLag_flattened_line_12041             I 19 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174547 7 -    224448 CCA-T-GCA
i Xerus_inauris.XerIna_scaffold_2302                     I 19 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29258 7 -     86975 GTG-T-ACA
i Zalophus_californianus.ZalCal_flattened_line_17732     I 19 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       377 7 -      1899 ATG-T-GAG
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 17 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1391 7 +      2126 ATA-T-GCA
i Ziphius_cavirostris.ZipCav_flattened_line_504766       I 19 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Echinops_telfairi.JH980293.1                            62855344 1 - 111700974 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mellivora_capensis.MelCap_flattened_line_19308             26567 0 -     74585 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5838 15 +     36723 AA-AT--AC-C--CTGTA-G--AC
s Acinonyx_jubatus.LLWD01001279.1                           813251 15 +   1699592 AA-AT--AC-C--ATGTA-G--AG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 13
s Acomys_cahirinus.AcoCah_scaffold_21377                     25496 15 +     63021 AA-AT--AC-A--CTGTC-G--AG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 14
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415712 15 +  29979442 AA-AT--AC-C--CTATA-G--AG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 13
s Ailurus_fulgens.LNAC01001112.1                            216048 15 +    347723 AA-AT--AC-C--CTATA-G--AG
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 13
s Allactaga_bullata.AllBul_scaffold_20030                    18463 15 -     61208 AA-AT--AC-C--CTATA-G--AG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 13
s Allenopithecus_nigroviridis.k141_3755588                   48476 15 +     53615 AA-AT--AC-C--CTATA-G--GC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           507 15 +     13857 AA-AT--AC-C--CTATA-G--GC
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17058 15 -     21945 AA-AT--AC-C--CTATA-G--GC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18743 15 +     32033 AA-AT--AC-C--CTATA-G--GC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72586 15 -     84148 AA-AT--AC-C--CTATT-G--CC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44825 15 -     78289 AA-AT--AC-C--CTATT-G--CC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44264 15 +     55831 AA-AT--AC-C--CTATT-G--CC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42714 15 -     64179 AA-AT--AC-C--CTATT-G--CC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24348 15 -     24835 AA-AT--AC-C--CTATT-G--CC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41339 15 +     45454 AA-AT--AC-C--CTATT-G--CC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              46988 15 +     70886 AA-AT--AC-C--CTATT-G--CC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9161 15 +     30854 AA-AT--AC-C--CTATT-G--CC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33295 15 +     42133 AA-AT--AC-C--CTATT-G--CC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585696 15 +   2318259 AA-AT--AC-C--TTGTA-G--AA
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 12
s Anoura_caudifer.AnoCau_scaffold_1412                      177498 15 -    412891 AA-AT--AC-C--CTGTG-G--AG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 12
s Antilocapra_americana.AntAmePen_scaffold_21030             50802 15 -     68529 AA-AT--AC-C--CTGTA-G--AA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 13
s Aotus_azarae.k141_887050                                    1552 15 +     17741 AA-AT--AC-C--CTATT-G--TC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2177 15 -     15923 AA-AT--AC-C--CTATT-G--TC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672459 15 +   5030052 AA-AT--AC-C--CTATT-G--TC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2453 15 -     16391 AA-AT--AC-C--CTATT-G--TC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2012 15 -     17186 AA-AT--AC-C--CTATT-G--TC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16532 15 -     32367 AT-AT--AC-A--CTATG-G--AG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 1
s Arctocebus_calabarensis.k141_1364444                       20635 15 -     45910 GA-AT--AC-C--CTCTA-G--AG
i Arctocebus_calabarensis.k141_1364444                   C 0 I 12
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5764 15 -     15198 AA-AT--AC-C--CTGTG-A--AG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 12
s Ateles_geoffroyi_b.tarseq_1536                               275049 15 +  21539123 AA-AT--AC-C--CTATT-G--TC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11217 15 +     48076 AA-AT--AC-C--CTATT-G--TC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6352 15 -     28759 AA-AT--AC-C--CTATT-G--TC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33906 15 +     44353 AA-AT--AC-C--CTATT-G--TC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49277 15 -     71267 AA-AT--AC-C--CTATT-G--TC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23335 15 -     33135 AA-AC--AC-C--CTATT-G--TC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6604 15 +     11645 AA-AT--AC-C--CTCTA-G--AG
i Avahi_laniger.k141_2756659                             C 0 I 13
s Avahi_peyrierasi.k141_1823318                               6612 15 -     19611 AA-AT--AC-C--CTCTA-G--AG
i Avahi_peyrierasi.k141_1823318                          C 0 I 13
s Balaenoptera_acutorostrata.KI537508.1                    7963845 15 -  23207421 aa-at--ac-C--CTGTA-G--AG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 13
s Balaenoptera_bonaerensis.DF411050.1                          345 15 -     25979 aa-at--ac-C--CTATA-G--AG
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 13
s Beatragus_hunteri.BeaHun_scaffold_7278                     86704 15 +    124022 AA-AT--AC-C--TTGTA-G--AA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 12
s Bison_bison.KN261452.1                                     22238 15 +    288883 AA-AT--AC-C--CTGTA-G--AA
i Bison_bison.KN261452.1                                 C 0 I 13
s Bos_indicus.CM003047.1                                  20356630 15 +  48749331 AA-AT--AC-C--CTGTA-G--AA
i Bos_indicus.CM003047.1                                 C 0 I 13
s Bos_mutus.JH880303.1                                      755194 15 +   1948126 AA-AT--AC-C--CTGTA-G--AA
i Bos_mutus.JH880303.1                                   C 0 I 13
s Bos_taurus.CM000203.6                                   27545336 15 -  45695690 AA-AT--AC-C--CTGTA-G--AA
i Bos_taurus.CM000203.6                                  C 0 I 13
s Bubalus_bubalis.KI419123.1                               1530357 15 -   4408762 AA-AT--AC-C--CTGTA-G--AA
i Bubalus_bubalis.KI419123.1                             C 0 I 13
s Cacajao_ayresi.k141_96119                                   8226 15 +     28062 AA-AT--AC-C--CTATC-G--TC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43520 15 -     91139 AA-AT--AC-C--CTATC-G--TC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21046 15 +     95584 AA-AT--AC-C--CTATC-G--TC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20959 15 +    119600 AA-AT--AC-C--CTATC-G--TC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10532 15 +     18648 AA-AT--GC-C--CTATT-G--TC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10067 15 -     13885 AA-AT--GC-C--CTATT-G--TC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2137 15 -      8861 AA-AT--GC-C--CTATT-G--TC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454529 15 + 189096842 AA-AT--GC-C--CTATT-G--TC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2052 15 +      8664 AA-AT--GC-C--CTATT-G--TC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631359 17 +  17673402 aa-at--at-gctGTGTA-G--AG
i Camelus_bactrianus.KN276810.1                          C 0 I 13
s Camelus_dromedarius.KN272107.1                           4665645 17 +   7040546 aa-at--at-gctGTGTA-G--AG
i Camelus_dromedarius.KN272107.1                         C 0 I 13
s Camelus_ferus.KB017975.1                                 1209305 17 +   1652518 aa-at--at-gctGTGTA-G--AG
i Camelus_ferus.KB017975.1                               C 0 I 13
s CanFam4.chr16                                           42505730 15 +  60362399 AA-AT--AT-C--CTATA-T--AC
i CanFam4.chr16                                          C 0 I 13
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9366 15 -     23171 AA-AT--AT-C--CTATA-T--AC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 13
s Canis_lupus_dingo.QKWQ01000480.1                          222709 15 +   9314153 AA-AT--AT-C--CTATA-T--AC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 13
s Canis_lupus_familiaris.chr16                            41615844 15 +  59632846 AA-AT--AT-C--CTATA-T--AC
i Canis_lupus_familiaris.chr16                           C 0 I 13
s Canis_lupus_orion.HG994398.1                            45107425 15 -  63665305 AA-AT--AT-C--CTATA-T--AC
i Canis_lupus_orion.HG994398.1                           C 0 I 13
s Capra_aegagrus.CM003241.1                               27409425 15 -  46296322 AA-AT--AC-C--TTGTA-G--AA
i Capra_aegagrus.CM003241.1                              C 0 I 12
s Capra_hircus.CM004588.1                                 26591699 15 +  44709034 AA-AT--AC-C--TTGTA-G--AA
i Capra_hircus.CM004588.1                                C 0 I 12
s Carlito_syrichta.NW_007259797.1                           270813 15 +    496798 AA-AT--AC-C--TTATA-T--AA
i Carlito_syrichta.NW_007259797.1                        C 0 I 13
s Carollia_perspicillata.CarPer_scaffold_107871                620 15 +      9923 AA-AT--GC-C--CGGTG-G--AG
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 12
s Castor_canadensis.CasCan_scaffold_39952                    28015 15 -     39886 AA-AT--TT-T--CTACA-G--AG
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 13
s Catagonus_wagneri.CatWag_scaffold_2839                     79899 15 -    217609 GC-AT--AC-C--CTGTA-G--AG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 13
s Cavia_aperea.AVPZ01000300.1                              4996762 15 +  23392119 AA-AT--AC-C--CAATA-G--AG
i Cavia_aperea.AVPZ01000300.1                            C 0 I 13
s Cavia_porcellus.DS562891.1                               5000203 15 +  23407841 AA-AT--AC-C--CAATA-G--AG
i Cavia_porcellus.DS562891.1                             C 0 I 13
s Cavia_tschudii.CavTsc_scaffold_23560                       63284 15 -     66877 AA-AT--AC-C--CAATA-G--AG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 13
s Cebuella_niveiventris.k141_592277                           5450 15 -     12580 AC-AT--GC-C--CTATT-G--TC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43508 15 +     53515 AC-AT--GC-C--CTATT-G--TC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371436 15 -  26074798 AA-AT--AC-C--CTATT-G--TC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8325 15 -     34880 AA-AT--AC-C--CTATT-G--TC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67420 15 -     89041 AA-AT--AC-C--CTATT-G--TC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2773 15 -      5494 AA-AT--AC-C--TTATA-T--AA
i Cephalopachus_bancanus.k141_1689090                    C 0 I 13
s Ceratotherium_simum.JH767749.1                          15492533 15 -  27778364 AA-AT--AC-C--CTGTA-G--AG
i Ceratotherium_simum.JH767749.1                         C 0 I 13
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19366 15 +     27315 AA-AT--AC-C--CTGTA-G--AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 13
s Cercocebus_atys.KQ010504.1                                141632 15 -   4669795 AA-AT--AC-C--CTATA-G--GC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45375 15 +     47900 AA-AT--AC-C--CTATA-G--GC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            804 15 -     14410 AA-AT--AC-C--CTATA-G--GC
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45188 15 -    148725 AA-AT--AC-C--CTATA-G--GC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27390 15 -     40656 AA-AT--AC-C--CTATA-G--GC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7354 15 +     20796 AA-AT--AC-C--CTATA-G--GC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12472 15 -     17524 AA-AT--AC-C--CTATA-G--GC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28199 15 -     34525 AA-AT--AC-C--CTATA-G--GC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11975 15 -     25376 AA-AT--AC-C--CTATA-G--GT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364569 15 -  39242232 AA-AT--AC-C--CTATA-G--GC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270289 15 +  21565898 AA-AT--AC-C--CTATA-G--GC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32657 15 -     45857 AA-AT--AC-C--CTATA-G--GC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27558 15 -     32606 AA-GT--AC-C--CTATA-G--GC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3720 15 +      8499 AA-AT--AC-C--CTATA-G--GC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26116 15 +     70610 AA-AT--AC-C--CTATA-G--GC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23084 15 +     36323 AA-AT--AC-C--CTATA-G--GC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13051  5 -     19938 AA-CC--A----------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 9
s Cheirogaleus_major.k141_666340                             30977 15 -     33796 AA-AT--AC-C--TTCTA-G--AG
i Cheirogaleus_major.k141_666340                         C 0 I 13
s Cheirogaleus_medius.k141_759766                             5494 15 -     15404 AA-AT--AC-C--TTCTA-G--AG
i Cheirogaleus_medius.k141_759766                        C 0 I 13
s Cheracebus_lucifer.k141_2312002                             9326 15 -     32913 AA-AT--AC-C--CTCTC-G--TC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19739 15 -     40346 AA-AT--AC-C--CTCTC-G--TC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             19994 15 +    216457 AA-AT--AC-C--CTCTC-G--TC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19787 15 +     39636 AA-AT--AC-C--CTCTC-G--TC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239118 15 -   2543920 AA-AT--GC-C--TCATA-T--AG
i Chinchilla_lanigera.JH722012.1                         C 0 I 13
s Chiropotes_albinasus.k141_1946120                           4382 15 +      5346 AA-AT--GC-C--CTATT-G--TC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42857 15 -    112038 AA-AT--AC-C--CTATC-G--TC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8428 15 +     34062 AA-AT--AC-C--CTATC-G--TC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343978 15 +  18827391 AA-AT--AC-C--CTATA-G--GC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10526 15 -     44032 AA-AT--AC-C--CTATA-G--GC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305303 15 - 135778131 AA-AT--AC-C--CTATA-G--GC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15168 14 +     15858 AA-AT--AT-C--TGTCA-G---G
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 10
s Choloepus_hoffmanni.KN194906.1                            606743 14 -    839153 AA-AT--AT-C--TGTCA-G---G
i Choloepus_hoffmanni.KN194906.1                         C 0 I 10
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1163 15 +      2406 AA-CT--AT-T--CCACAAG---G
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 I 13
s Colobus_angolensis.KN981557.1                             409708 15 -   2368649 AA-AT--AC-C--CTATC-G--GC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379589 15 - 200372422 AA-AT--AC-C--CTGTC-G--GC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3146 15 -     84244 AA-AT--AC-C--CTGTC-G--GC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807594 15 +  53390261 AA-AT--AC-C--ATAGA-G--AG
i Condylura_cristata.JH655891.1                          C 0 I 13
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3126 15 -      8242 AA-AT--AC-C--CTGTA-G--AG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 13
s Cricetomys_gambianus.CriGam_scaffold_14425                 44637 15 -     83289 GT-AC--AC-C--CTGTA-G--AG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 13
s Cricetulus_griseus.LT883664.1                          213115209 15 - 224834208 AA-AT--AC-C--CTGTA-G--AG
i Cricetulus_griseus.LT883664.1                          C 0 I 13
s Crocidura_indochinensis.CroInd_scaffold_77846               9759 11 +     12657 AA-AT--AT-A--TCAC-------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 9
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4703 15 +     87169 AA-AT--AC-C--CTGTG-G--AG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 13
s Ctenodactylus_gundi.CteGun_scaffold_65                    645333 14 -   1526836 AA-AT--AC-C---CGTA-G--CG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 13
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18672 15 +     50838 AA-AT--TC-T--TTATA-G--AT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 13
s Cuniculus_paca.CunPac_flattened_line_7025                   4679 15 +     36344 AA-AT--AC-C--CTATA-G--AG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 13
s Dasyprocta_punctata.DasPun_flattened_line_15900            28455 15 +     75252 GA-AT--AC-C--CTATA-G--GG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 13
s Dasypus_novemcinctus.JH564415.1                          2110403  5 -   2246927 AA-CC--A----------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 9
s Daubentonia_madagascariensis.ctg71                        292913 15 +  12879189 AA-AT--AC-C--CTCTA-G--AG
i Daubentonia_madagascariensis.ctg71                     C 0 I 13
s Delphinapterus_leucas.KZ290073.1                        18632253 15 -  35494412 AA-AT--AC-C--CTGTA-G--AG
i Delphinapterus_leucas.KZ290073.1                       C 0 I 13
s Desmodus_rotundus.KZ672289.1                            11865535 14 -  20541912 AA-AT--AC-C--C-ATG-G--AA
i Desmodus_rotundus.KZ672289.1                           I 43 I 422
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664817 15 -   1390856 AA-AT--AC-C--CTGTA-G--AG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 13
s Diceros_bicornis.DicBicMic_scaffold_5955                  139610 15 -    198055 AA-AT--AC-C--CTGTA-G--AG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 13
s Dinomys_branickii.DinBra_scaffold_10381                    99206 15 -    115145 AA-AT--GT-C--TTATA-G--AG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 13
s Dipodomys_ordii.KN672350.1                              18950831 15 -  37912305 AA-AT--CT-C--CCACA-G--AG
i Dipodomys_ordii.KN672350.1                             C 0 I 10
s Dipodomys_stephensi.DipSte_scaffold_89095                   5756 15 -     10735 AA-AT--CT-C--CCACA-G--AG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 10
s Eidolon_helvum.AWHC01266696.1                               6590 15 +     19438 aa-at--ac-C--CCATA-G--AG
i Eidolon_helvum.AWHC01266696.1                          C 0 I 13
s Elaphurus_davidianus.JRFZ01104969.1                       240065 15 -    607251 AA-AT--AC-C--CTGTA-G--AA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 13
s Elephantulus_edwardii.JH947257.1                         9109233 15 -  10337057 AA-GC--AC-C--TCATAGG---G
i Elephantulus_edwardii.JH947257.1                       C 0 I 14
s Ellobius_lutescens.LOEQ01008920.1                          31355 15 +    110024 GA-AT--AC-C--CTGGA-G--AG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 13
s Ellobius_talpinus.LOJH01026522.1                           13326 15 +     18970 GA-AT--AC-C--CTGGA-G--AG
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 13
s Enhydra_lutris.KZ291758.1                               24916461 15 +  41312741 AA-AT--AC-C--CTATG-G--AG
i Enhydra_lutris.KZ291758.1                              C 0 I 13
s Eptesicus_fuscus.JH977646.1                             12579235 15 +  14770903 AA-CT--AC-C--CTGTA-G--AG
i Eptesicus_fuscus.JH977646.1                            C 0 I 13
s Equus_asinus.JREZ01000139.1                              3041694 15 -   4378816 AG-GT--AC-C--CTGCA-G--AG
i Equus_asinus.JREZ01000139.1                            C 0 I 13
s Equus_caballus.CM000403.2                               21375632 15 +  39960074 AG-GT--AC-C--CTGCA-G--AG
i Equus_caballus.CM000403.2                              C 0 I 13
s Equus_przewalskii.ATBW01110277.1                            1013 15 -      1194 AG-GT--AC-C--CTGCA-G--AG
i Equus_przewalskii.ATBW01110277.1                       C 0 I 13
s Erinaceus_europaeus.JH835339.1                           3666402 15 +   7059049 AA-AT--GC-A--TTATA-G--AG
i Erinaceus_europaeus.JH835339.1                         I 2 I 13
s Erythrocebus_patas.Contig38                               263516 15 +  21539334 AA-AT--AC-C--CTATA-G--GC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71462 15 -    133382 AA-AT--AC-C--CTGTA-A--AG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 13
s Eubalaena_japonica.EubJap_flattened_line_247202             1006 15 -      1170 AA-AT--AC-C--CTGTA-G--AG
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 I 13
s Eulemur_albifrons.k141_51491                               15122 15 -     24895 AA-AT--AC-C--TTCTA-G--AG
i Eulemur_albifrons.k141_51491                           C 0 I 13
s Eulemur_collaris.k141_601111                               42832 15 -     70999 AA-AT--AC-C--TTCTA-G--AG
i Eulemur_collaris.k141_601111                           C 0 I 13
s Eulemur_coronatus.k141_384460                              86802 15 +    112731 AA-AT--AC-C--TTCTA-G--AG
i Eulemur_coronatus.k141_384460                          C 0 I 13
s Eulemur_flavifrons.k141_433119                             43365 15 +     68309 AA-AT--AC-C--TTCTA-G--AG
i Eulemur_flavifrons.k141_433119                         C 0 I 13
s Eulemur_fulvus.k141_636316                                 53689 15 -     65740 AA-AT--AC-C--TTCCA-G--AG
i Eulemur_fulvus.k141_636316                             C 0 I 13
s Eulemur_macaco.k141_1562045                                24321 15 -     75513 AA-AT--AC-C--TTCTA-G--AG
i Eulemur_macaco.k141_1562045                            C 0 I 13
s Eulemur_mongoz.k141_232305                                 48516 15 -     97555 AA-AT--AC-C--TTCTA-G--AG
i Eulemur_mongoz.k141_232305                             C 0 I 13
s Eulemur_rubriventer.k141_1423786                            5240 15 +     30972 AA-AT--AC-C--TTCTA-G--AG
i Eulemur_rubriventer.k141_1423786                       C 0 I 13
s Eulemur_rufus.k141_514691                                  42960 15 -     52037 AA-AT--AC-C--TTCTA-G--AG
i Eulemur_rufus.k141_514691                              C 0 I 13
s Eulemur_sanfordi.k141_1122526                              59363 15 -    111500 AA-AT--AC-C--TTCTA-G--AG
i Eulemur_sanfordi.k141_1122526                          C 0 I 13
s Felis_catus.CM001381.2                                 186247160 15 - 206538554 AA-AT--AC-C--ATGTA-G--AG
i Felis_catus.CM001381.2                                 C 0 I 13
s Felis_catus_fca126.CM031415.1                          185116946 15 - 205367284 AA-AT--AC-C--ATGTA-G--AG
i Felis_catus_fca126.CM031415.1                          C 0 I 13
s Felis_nigripes.FelNig_flattened_line_31944                 28043 15 -     30238 AA-AT--AC-C--ATGTA-G--AG
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 13
s Fukomys_damarensis.KN121974.1                            2916760 15 -   3816255 AT-AT--AT-C--CTATG-G--AG
i Fukomys_damarensis.KN121974.1                          C 0 I 13
s Galago_moholi.ctg3793                                     125998 15 -    137831 AA-AT--GC-C--CTCTA-G--AA
i Galago_moholi.ctg3793                                  C 0 I 12
s Galago_senegalensis.k141_991736                             9543 15 +     22493 GA-AT--GC-C--CTCTA-G--AA
i Galago_senegalensis.k141_991736                        C 0 I 12
s Galagoides_demidoff.k141_561628                            21614 15 -     32986 GA-AT--AC-C--CTCTA-G--AG
i Galagoides_demidoff.k141_561628                        C 0 I 12
s Galeopterus_variegatus.GalVar_scaffold_51812                1505 15 -     28519 AA-AT--AC-C--CTATA-G--AA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 I 13
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91768 15 -     95226 AA-AT--AC-C--CTGTA-G--AA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 13
s Glis_glis.GliGli_scaffold_33859                            34828 12 -     36801 AA-AT--AC-C--CTATG------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 15
s Gorilla_beringei.k141_3358147                               6138 15 -      8343 AA-AT--AC-C--CTGTA-G--AC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255153 15 - 186649187 AA-AT--AC-C--CTGTA-G--AC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2328 12 -     78134 AA-AT--AC-C--CTATT------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 15
s Hapalemur_alaotrensis.k141_330369                          15047 15 -     40692 AA-AT--AC-C--CTCTA-A--AG
i Hapalemur_alaotrensis.k141_330369                      C 0 I 13
s Hapalemur_gilberti.k141_646465                             36449 15 +     49394 AA-AT--AC-C--CTCTA-A--AG
i Hapalemur_gilberti.k141_646465                         C 0 I 13
s Hapalemur_griseus.k141_763500                              61317 15 -     66874 AA-AT--AC-C--CTCTA-G--AG
i Hapalemur_griseus.k141_763500                          C 0 I 13
s Hapalemur_meridionalis.k141_258450                         10191 15 -     42923 AA-AT--AC-C--CTCTA-A--AG
i Hapalemur_meridionalis.k141_258450                     C 0 I 13
s Hapalemur_occidentalis.k141_578367                         17190 15 -     53142 AA-AT--AC-C--CTCTA-G--AG
i Hapalemur_occidentalis.k141_578367                     C 0 I 13
s Helogale_parvula.HelPar_flattened_line_2585                31136 15 -    327341 AA-AT--AC-C--CTGTA-G--AG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 13
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9443 15 +     48891 AA-AT--AC-C--TTGTA-G--AA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 12
s Heterocephalus_glaber.JH602082.1                         1932736 15 -  22651954 AA-AT--AC-C--CTATG-G--AG
i Heterocephalus_glaber.JH602082.1                       C 0 I 13
s Heterohyrax_brucei.HetBruBak_scaffold_154059                1401 15 +      4291 AA-AC--AT-C--CCATG-G--GG
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 I 13
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7966  3 -     36432 AA-A--------------------
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 12
s Hipposideros_armiger.JXIK01000431.1                      1551947 15 -   1711038 AA-AT--GC-C--CTGTA-G--AG
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 13
s Hipposideros_galeritus.HipGal_scaffold_164997               1386 15 -      2730 AA-AT--GC-C--CTGTA-G--AG
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 13
s Hoolock_leuconedys.ctg274                                    143162 15 -    630532 AA-AT--AC-C--CTATA-G--AC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70300 15 +     83186 AA-AT--AT-T--CTGTA-G--AG
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 13
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72199 15 +    143317 AA-AT--AC-C--CAATA-G--AG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 13
s Hylobates_agilis.k141_1155965                               6196 15 +     12352 AA-AT--AC-C--CTATA-G--AC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13380 15 +     55766 AA-AT--AC-C--CTATA-G--AC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052980 15 + 191637585 AA-AT--CC-C--CTATA-G--AC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801858 15 +  11177569 AA-AT--CC-C--CTATA-G--AC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7484 15 -    135385 AA-AT--AC-C--CTATA-G--AG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 13
s Ictidomys_tridecemlineatus.JH393364.1                     387180 15 +   7955117 AA-AT--AC-A--CTATA-A--AG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 13
s Indri_indri.k141_2415743                                    2748 15 +     11955 AA-AT--AC-C--CTCTA-G--AG
i Indri_indri.k141_2415743                               C 0 I 13
s Inia_geoffrensis.IniGeo_flattened_line_69447               10354 15 -     16823 GA-AT--AC-C--CTGTA-G--AG
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 13
s Jaculus_jaculus.JH725527.1                               1240221 13 +   9596543 AA-AT--AC-C--TTATA-G----
i Jaculus_jaculus.JH725527.1                             C 0 I 9
s Kogia_breviceps.KogBre_flattened_line_3970                 72197 15 -     97402 AA-AT--AC-C--CTGTA-G--AG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 13
s Lagothrix_lagothricha.k141_246028                          43602 15 +    110728 AA-AT--AC-C--CTATT-G--CC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63206 15 -     65777 AA-CT--AC-C--CTGGA-G--AG
i Lasiurus_borealis.LasBor_scaffold_16567                I 26 I 13
s Lemur_catta.scaffold_24                                 14759840 15 +  30322482 AA-AT--AC-C--CTCTA-G--AG
i Lemur_catta.scaffold_24                                C 0 I 13
s Leontocebus_fuscicollis.k141_2994775                        4516 15 -     13097 AA-AT--GC-C--CTATT-G--TC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4270 15 +      5940 AA-AT--GC-C--CTATT-G--TC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4100 15 -      5717 AA-AT--GC-C--CTATT-G--TC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10472 15 -     11567 AA-AT--GA-C--CTATT-G--TC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11853 15 -     12945 AA-AT--GA-C--CTATT-G--TC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9354 15 +     29618 GA-AT--AC-C--TTCTA-G--AG
i Lepilemur_ankaranensis.k141_567626                     C 0 I 13
s Lepilemur_dorsalis.k141_387009                              9350 15 +     31569 GA-AT--AC-C--TTCTA-G--AG
i Lepilemur_dorsalis.k141_387009                         C 0 I 13
s Lepilemur_ruficaudatus.k141_330196                          9360 15 +     24756 AA-AT--AC-C--TTCTA-G--AG
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 13
s Lepilemur_septentrionalis.k141_360456                       9360 15 +     16388 GA-AT--AC-C--TTCTA-G--AG
i Lepilemur_septentrionalis.k141_360456                  C 0 I 13
s Leptonychotes_weddellii.KB714746.1                        813837 15 -   3914936 AA-AT--AC-A--CTATA-G--AG
i Leptonychotes_weddellii.KB714746.1                     C 0 I 13
s Lepus_americanus.LepAme_scaffold_56121                     18211  5 +     24238 AA-AT--G----------------
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 16
s Lipotes_vexillifer.KE559953.1                             341539 15 +    662738 AA-AC--AC-C--CTGTA-G--AG
i Lipotes_vexillifer.KE559953.1                          C 0 I 13
s Lophocebus_aterrimus.ctg367                               334517 15 -   1826925 AA-AT--AC-C--CTATG-G--GC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11699 15 +     19643 GA-AT--AC-T--CTCTA-G--TG
i Loris_lydekkerianus.k141_2031736                       C 0 I 12
s Loris_tardigradus.ctg83                                  5045369 15 -   6120653 GA-AT--AC-T--CTCTA-G--TG
i Loris_tardigradus.ctg83                                C 0 I 12
s Loxodonta_africana.GL010049.1                           39082036 15 +  43346337 AA-AT--AT-C--CTACA-G--GG
i Loxodonta_africana.GL010049.1                          C 0 I 13
s Lycaon_pictus.CM007581.1                                41614999 15 +  59628241 AA-AT--AT-C--CTATA-T--AC
i Lycaon_pictus.CM007581.1                               C 0 I 13
s Macaca_arctoides.k141_1757516                              45912 15 -     61512 AA-AT--AC-C--ATATA-G--GC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373574 15 -  60120075 AA-AT--AC-C--ATATA-G--GC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25836 15 +     30207 AA-AT--AC-C--CTATA-G--GC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             674 15 -      5035 AA-AT--AC-C--CTATA-G--GC
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25789 15 +     30527 AA-AT--AC-C--CTATA-G--GC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36965 15 -     50087 AA-AT--AC-C--CTATA-G--GC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46709 15 +     51645 AA-AT--AC-C--CTATA-G--GC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415912 15 - 187317192 AA-AT--AC-C--CTATA-G--GC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400142 15 +  25927173 AA-AT--AC-C--CTATA-G--GC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49314 15 -     62418 AA-AT--AC-C--CTATA-G--GC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1851 15 +     14901 AA-AT--AC-C--ATATA-G--GC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45786 15 +     59329 AA-AT--AC-C--CTATA-G--GC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271694 15 +    668171 AA-AT--AC-C--CTATA-G--GC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   338 15 -      5049 AA-AT--AC-C--ATATA-G--GC
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3492 15 +     17132 AA-AT--AC-C--CTATA-G--GC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223561 14 -    270270 AA-AT--AC-C--TCATA-G--A-
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 10
s Mandrillus_leucophaeus.scaffold280                        322982 15 +  24302211 AA-AT--AC-C--CTATA-G--GC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357813 15 -    752769 AA-AT--AC-C--CTATA-G--GC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673887 15 -    737560 AA-AT--AC-A--TCATA-G--AG
i Manis_javanica.JSZB01003497.1                          C 0 I 13
s Manis_pentadactyla.KN006162.1                             221183 15 +    317179 AA-AT--AC-A--TCATA-G--AG
i Manis_pentadactyla.KN006162.1                          C 0 I 13
s Marmota_marmota.CZRN01000018.1                           7501399 15 +  40650429 AA-AT--AC-A--CTATA-A--AG
i Marmota_marmota.CZRN01000018.1                         C 0 I 13
s Megaderma_lyra.MegLyr_scaffold_4542                       150731 15 +    207569 AA-AT--AC-C--CTGTA-G--AG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 13
s Mellivora_capensis.MelCap_flattened_line_19308             26567  7 -     74585 --------------TATA-G--AG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 13
s Meriones_unguiculatus.MerUng_scaffold_7390                 50490 16 -    140813 AACAT--AC-C--TGGTG-G--AG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 13
s Mesocricetus_auratus.KB708134.1                         17429593 15 +  29670104 AA-AT--AT-C--CTATA-G--AG
i Mesocricetus_auratus.KB708134.1                        C 0 I 13
s Mesoplodon_bidens.MesBid_scaffold_6114                     87823 15 +     93471 AA-AT--AC-C--CTGTA-G--AG
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 13
s Mico_argentatus.k141_582562                                10639 15 +     17804 AA-AT--GC-C--CTATT-G--TC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11139 15 -     12984 AA-AT--GC-C--CTATT-G--TC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19455 15 -     26561 AA-AT--GC-C--CTATT-G--TC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985190 15 +  93316391 AA-AT--AC-C--TTCTA-G--AC
i Microcebus_murinus.CM007674.1                          C 0 I 13
s Microgale_talazaci.MicTal_scaffold_6613                    46523 15 +    145209 AA-AT--AT-C--CCACTGA---A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 64
s Micronycteris_hirsuta.MicHir_scaffold_2233                185420 15 +    200668 AA-AT--AC-C--CCATG-G--AG
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 12
s Microtus_ochrogaster.CM001695.1                         15962795 15 +  27267610 GA-AT--AC-C--CTGGA-G--AG
i Microtus_ochrogaster.CM001695.1                        C 0 I 13
s Miniopterus_natalensis.LDJU01000034.1                    6363583 15 -   8254450 AA-AT--AC-C--CTGTA-G--AG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_23309             42490 15 -     48117 AA-AT--AC-C--CTGTA-G--AG
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 1
s Miopithecus_ogouensis.k141_1534655                         23016 15 -     27822 AG-AT--AC-C--CTATA-G--GC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8848 15 +     27589 AA-AT--AC-A--CTATA-G--AG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 13
s Mirza_zaza.k141_766280                                     52973 15 -     62432 AA-AT--AC-C--TTCTA-G--AC
i Mirza_zaza.k141_766280                                 C 0 I 13
s Monodon_monoceros.MonMon_M_scaffold_103                   359928 15 +    437263 AA-AT--AC-C--CTGTA-G--AG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 13
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179648 15 +    366855 AA-AT--AC-C--CTGTG-G--AG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 13
s Moschus_moschiferus.MosMos_scaffold_13123                  25890 15 -     82753 AA-AT--TC-C--CTGTA-G--AA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 13
s Mungos_mungo.MunMun_flattened_line_18455                   18887 15 -     63510 AA-AT--AC-C--CTGTA-G--AG
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 13
s Murina_feae.MurFea_scaffold_17764                          39548 15 +     47283 AA-AT--AC-C--CTGTA-G--AG
i Murina_feae.MurFea_scaffold_17764                      C 0 I 13
s Mus_caroli.LT608237.1                                   35593514 15 + 120012414 AA-AT--GC-C--CTGTA-G--AG
i Mus_caroli.LT608237.1                                  C 0 I 14
s Mus_musculus.chr8                                       41687903 15 + 129401213 AA-AT--GC-C--CTGTA-G--AG
i Mus_musculus.chr8                                      C 0 I 14
s Mus_spretus.CM004101.1                                  39497196 15 + 130317789 AA-AT--GC-C--CTGTA-G--AG
i Mus_spretus.CM004101.1                                 C 0 I 14
s Muscardinus_avellanarius.MusAve_scaffold_12866             83884 12 -     86153 AA-AT--AC-C--CTATG------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 15
s Mustela_putorius.JH418006.1                             14355483 15 +  14710649 AA-AT--AC-C--CTATA-G--AG
i Mustela_putorius.JH418006.1                            C 0 I 13
s Myocastor_coypus.MyoCoy_scaffold_15261                     63457 15 +     67721 AA-GT--TC-T--TTATG-G--AA
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 13
s Myotis_brandtii.KE162005.1                               9793836 15 +  10118263 AA-AT--AC-C--CTGAA-G--AG
i Myotis_brandtii.KE162005.1                             C 0 I 3
s Myotis_davidii.KB100139.1                                4387967 15 +   6019432 AA-GT--AC-C--CTGAA-G--AG
i Myotis_davidii.KB100139.1                              C 0 I 13
s Myotis_lucifugus.GL429869.1                               383795 15 +   4330536 AA-AT--AC-C--CTGAA-G--AG
i Myotis_lucifugus.GL429869.1                            C 0 I 3
s Myotis_myotis.MyoMyo_scaffold_66571                         2604 15 +     18357 AA-AT--AC-C--CCGAA-G--AG
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120133 14 +    130748 AA-AT--AT-C--TGTTG-G---G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 13
s Nannospalax_galili.KL204047.1                             946640 15 +   3037898 AA-AT--AC-C--TTATA-T--AG
i Nannospalax_galili.KL204047.1                          C 0 I 13
s Nasalis_larvatus.k141_1350636                              29665 15 +     34575 AA-AT--AC-C--CTATA-G--GC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232606 15 -   7148211 AC-AT--AC-C--CTGTA-G--AG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 13
s Noctilio_leporinus.NocLep_scaffold_7894                   128616 15 -    149072 AA-AT--AT-C--CTGTG-A--TG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 13
s Nomascus_annamensis.k141_1771965                           54088 15 -    132029 AA-AT--AC-C--CTATA-G--AC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10183 15 -     16345 AA-AT--AC-C--CTATA-G--AC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16068 15 +     22201 AA-AT--AC-C--CTATA-G--AC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414289 15 -  22158432 AA-AT--AC-C--CTATA-G--AC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26466 15 -     54323 AA-AT--AC-C--CTATA-G--AC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198595 15 +   9404916 AA-AT--AT-C--CTATA-T--AC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 13
s Nycticebus_bengalensis.LG01                             93638599 15 + 196305487 GA-AT--AC-T--CTCTA-G--AG
i Nycticebus_bengalensis.LG01                            C 0 I 12
s Nycticebus_coucang.k141_1296080                             1202 15 -      9413 GA-AT--AC-T--CTCTA-G--AG
i Nycticebus_coucang.k141_1296080                        C 0 I 12
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93565979 15 - 199412804 GA-AT--AC-T--CTCTA-G--AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 12
s Ochotona_princeps.JH802162.1                             2557271  5 -   3988456 aa-aa--a----------------
i Ochotona_princeps.JH802162.1                           C 0 I 18
s Octodon_degus.JH651603.1                                11055410 15 -  11899542 AA-AT--TC-T--TTATG-G--AG
i Octodon_degus.JH651603.1                               C 0 I 13
s Odobenus_rosmarus.KB229312.1                             1452057 15 +   2017862 AA-AT--AC-A--CTATA-G--AG
i Odobenus_rosmarus.KB229312.1                           C 0 I 10
s Odocoileus_virginianus.KZ100018.1                         436658 15 -    630418 AA-AT--AC-C--CTGTA-G--AA
i Odocoileus_virginianus.KZ100018.1                      C 0 I 13
s Okapia_johnstoni.LVCL01S0005463.1                          14651 15 +    150152 AA-AT--AC-C--CTGTA-G--AA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 13
s Ondatra_zibethicus.OndZib_scaffold_7387                    93152 15 -    140218 GC-AT--AC-C--CTGGA-G--AG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 13
s Onychomys_torridus.OnyTor_scaffold_28377                    4032 15 -     41509 AA-AT--AC-C--CTGTA-G--AG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 13
s Orcinus_orca.KB316932.1                                  8102996 15 +  10937097 tt-tt--tt-t--ctgta-g--ag
i Orcinus_orca.KB316932.1                                C 0 I 13
s Orycteropus_afer.OryAfe_flattened_line_1597630               352 16 -       378 AA-AT--AC-C--CCATAAG--AG
i Orycteropus_afer.OryAfe_flattened_line_1597630         C 0 N 0
s Oryctolagus_cuniculus.CM000791.1                       107104005  5 - 174332312 AA-AT--G----------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 16
s Otocyon_megalotis.JAEUCK010005147.1                        39640 15 +    559221 AA-AT--AT-C--CTATA-T--AC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 13
s Otolemur_crassicaudatus.k141_649260                        41144 15 -     51505 GA-AT--GC-C--CTCTA-G--AG
i Otolemur_crassicaudatus.k141_649260                    C 0 I 12
s Otolemur_garnettii.GL873799.1                             354148 15 +   1103335 GA-AT--GC-C--CTCTA-G--AG
i Otolemur_garnettii.GL873799.1                          C 0 I 12
s Ovis_aries.CM001607.2                                   26404563 15 -  44047080 AA-AT--AC-C--TTGTA-G--AA
i Ovis_aries.CM001607.2                                  C 0 I 12
s Ovis_canadensis.OviCan_scaffold_67953                       5082 15 +     17875 AA-AT--AC-C--TTGTA-G--AA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 12
s Pan_troglodytes.CM009242.2                               1473182 15 - 189151597 AA-AT--AC-C--CTGTA-G--AC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24866 15 -    230217 AA-AT--AC-C--ATGTA-G--AG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 13
s Panthera_pardus.KV860321.1                              18462192 15 -  18783137 AA-AT--AC-C--ATGTA-G--AG
i Panthera_pardus.KV860321.1                             C 0 I 13
s Panthera_tigris.KE722367.1                               3972851 15 +   8748460 AA-AT--AC-C--ATGTA-G--AG
i Panthera_tigris.KE722367.1                             C 0 I 13
s Pantholops_hodgsonii.KE114653.1                          1616091 15 +   2937107 AA-AT--AC-C--TTGTA-G--AA
i Pantholops_hodgsonii.KE114653.1                        C 0 I 12
s Papio_anubis.CM001495.2                                   243814 15 - 183742232 AA-AT--AC-C--CTATA-G--GC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10276 15 +     21308 AA-AT--AC-C--CTATA-G--GC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292849 15 -  20919399 AA-AT--AC-C--CTATA-G--GC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22924 15 -     27687 AA-AT--AC-C--CTATA-G--GC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16070 15 +     16796 AA-AT--AC-C--CTATA-G--GC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22881 15 -     23640 AA-AT--AC-C--CTATA-G--GC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15463 15 +     78924 AA-AT--AC-C--CTGTG-G--AG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 13
s Perodicticus_ibeanus.k141_1921260                          27480 15 +     31479 GA-AT--AC-C--CTCTG-G--AC
i Perodicticus_ibeanus.k141_1921260                      C 0 I 12
s Perodicticus_potto.k141_1854441                            19849 15 -     24908 GA-AT--AC-C--CTCTG-G--AG
i Perodicticus_potto.k141_1854441                        C 0 I 12
s Perognathus_longimembris.PerPac_flattened_line_89005        2184 15 +      9367 AA-AT--CT-C--CTACA-C--AG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 10
s Peromyscus_maniculatus.KI615324.1                         247229 15 +  18517816 AA-AT--AC-C--CTGTA-G--AA
i Peromyscus_maniculatus.KI615324.1                      C 0 I 13
s Petromus_typicus.PetTyp_scaffold_17301                     32324 15 -     56120 AA-AT--AT-G--CTATA-G--AG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 13
s Phocoena_phocoena.PhoPho_flattened_line_24159               4522 15 -     63832 AA-AT--AC-C--CTGTA-G--AG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 13
s Piliocolobus_badius.k141_2704958                            3100 15 +     55023 AA-AC--AC-A--CTATA-G--GC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2638 15 -     89929 AA-AC--AC-A--CTATA-G--GC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3228 15 +     40849 AA-AC--AC-A--CTATA-G--GC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254902 15 +  14605196 AA-AC--AC-A--CTATA-G--GC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4384 15 +     22231 AA-CT--AC-C--CTGTA-G--AG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 241 I 13
s Pithecia_albicans.k141_1239476                             65224 15 +    207309 AA-AT--AC-C--CTATC-G--TC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6316 15 -     25401 AA-AT--AC-C--CTATC-G--TC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32060 15 +     58159 AA-AT--AC-C--CTATC-G--TC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32336 15 +     63561 AA-AT--AC-C--CTATC-G--TC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32096 15 +     51148 AA-AT--AC-C--CTATC-G--TC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557066 15 -   4542175 AA-AT--AC-C--CTATC-G--TC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32080 15 +     51125 AA-AT--AC-C--CTATC-G--TC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1520 15 +     19503 AA-AT--AC-C--CTGCA-G--AG
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 13
s Plecturocebus_bernhardi.k141_2549090                        8491 15 +     39866 AA-AT--AC-C--CTCTC-A--TC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3573 15 -      9282 AA-AT--AC-C--CTCTC-A--TC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42977 15 -     87950 AA-AT--AC-C--CTCTC-A--TC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43373 15 -     88961 AA-AT--AC-C--CTCTC-A--TC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8069 15 -     39403 AA-AT--AC-C--CTCTC-A--TC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43020 15 +     87928 AA-AT--AC-C--CTCTC-A--TC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8068 15 -     60166 AA-AT--AC-C--CTCTC-A--TC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15005 15 -     67232 AA-AT--AC-C--CTCTC-A--TC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42921 15 -     90634 AA-AT--AC-C--CTCTC-A--TC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44388 15 +     89403 AA-AT--AC-C--CTCTC-A--TC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178291 15 - 189387572 AA-AT--AC-C--CTATA-G--AC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193108 15 -   9816681 AA-AT--AC-C--CTATA-G--AC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28245 15 +     69807 AA-AT--AC-C--CTATA-G--GC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45426 15 -     80239 AA-AT--AC-C--CTATA-G--GC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 1226 15 +      7663 AA-AC--AT-C--CCGGG-G--GG
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 13
s Prolemur_simus.MPIZ01000396.1                            1982988 15 +   4620579 AA-AT--AC-C--CTCTA-G--AG
i Prolemur_simus.MPIZ01000396.1                          C 0 I 13
s Propithecus_coquerelli.NW_012148875.1                    1566499 15 -   2598838 AA-AT--AC-C--CTCTA-G--AG
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 13
s Propithecus_coronatus.k141_209299                           4137 15 -      7103 AA-AT--AC-C--CTCTA-G--AG
i Propithecus_coronatus.k141_209299                      C 0 I 13
s Propithecus_diadema.k141_153680                             4734 15 -     11706 AA-AT--AC-C--CTCTA-G--AG
i Propithecus_diadema.k141_153680                        C 0 I 13
s Propithecus_edwardsi.k141_635656                            8472 15 -     30655 AA-AT--AC-C--CTCTA-G--AG
i Propithecus_edwardsi.k141_635656                       C 0 I 13
s Propithecus_perrieri.k141_1496898                          34785 15 +     46564 AA-AT--AC-C--CTCTA-G--AG
i Propithecus_perrieri.k141_1496898                      C 0 I 13
s Propithecus_tattersalli.k141_1127767                       95064 15 -     98465 AA-AT--AC-C--CTCTA-G--AG
i Propithecus_tattersalli.k141_1127767                   C 0 I 13
s Propithecus_verreauxi.k141_1047036                          8703 15 +     35169 AA-AT--AC-C--CTCTA-G--AG
i Propithecus_verreauxi.k141_1047036                     C 0 I 13
s Psammomys_obesus.NESX01036366.1                            37833 16 +     52041 AACAT--AC-C--TGGTG-G--AG
i Psammomys_obesus.NESX01036366.1                        C 0 I 14
s Pteronotus_parnellii.KE847780.1                            52541 15 -     66298 AA-AT--AC-C--CTGTG-G--AG
i Pteronotus_parnellii.KE847780.1                        C 0 I 13
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5056 15 -     18639 AA-AT--AC-C--CTATA-G--AG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 13
s Pteropus_alecto.KB030862.1                               5841130 15 -  28871421 AA-AT--AC-C--CCATA-G--AG
i Pteropus_alecto.KB030862.1                             C 0 I 13
s Pteropus_vampyrus.KN525825.1                             3537645 15 -   4952924 AA-AT--AC-C--CCATA-G--AG
i Pteropus_vampyrus.KN525825.1                           C 0 I 13
s Puma_concolor.QAVW01001104.1                            18099509 15 +  38429054 AA-AT--AC-C--ATGTA-G--AG
i Puma_concolor.QAVW01001104.1                           C 0 I 13
s Pygathrix_cinerea.k141_1153803                             27621 15 +     91421 AA-AT--AC-C--CTATA-G--GC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154105 15 -   7812017 AA-AT--AC-C--CTATA-G--GC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8478 15 +     72585 AA-AT--AC-C--CTATA-G--GC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53575 15 +     55069 AA-AT--AC-C--CTGTA-G--AA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 13
s Rattus_norvegicus.chr16                                 37023119 15 -  90668790 AA-AT--GT-C--CTGTA-G--AG
i Rattus_norvegicus.chr16                                C 0 I 14
s Rhinolophus_sinicus.LVEH01000134.1                       2915109 15 +   3329780 AA-AT--AC-C--CTGTA-A--AG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 13
s Rhinopithecus_bieti.k119_778604                             2199 15 +      7119 AA-AT--AC-C--CTATA-G--GC
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122815 15 + 195417433 AA-AT--AC-C--CTATA-G--GC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237041 15 -   7961872 AA-AT--AC-C--CTATA-G--GC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75175 15 -    116970 AA-AT--AC-C--CCGTA-G--AG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 13
s Saguinus_bicolor.k141_1429097                               4380 15 +     27962 AA-AT--GC-C--CTATT-G--TC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4274 15 +      6077 AA-AT--GC-C--CTATT-G--TC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4364 15 +      5971 AA-AT--GC-C--TTATT-G--TC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4285 15 +      5932 AA-AT--GC-C--TTATT-G--TC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2627 15 -      4390 AA-AT--GC-C--TTATT-G--TC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392064 15 - 209938924 AA-AT--GC-C--CTATT-G--TC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4234 15 +      5979 AA-AT--GC-C--TTATT-G--TC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                803 15 -     22275 AA-AT--GC-C--CTATT-G--TC
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8251 15 +     16473 AA-AT--AT-C--CTGTA-G--AA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 12
s Saimiri_boliviensis.NW_024100920.1                       1109399 15 + 121099817 AA-AT--AC-C--CTATT-G--TC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30966 15 -     47369 AA-AT--AC-C--CTATT-G--TC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31352 15 -     79414 AA-AT--AC-C--CTATT-G--TC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28043 15 -     34454 AA-AT--AC-C--CTATT-G--TC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15444 15 -     22428 AA-AT--AC-C--CTATT-G--TC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30598 15 -     47109 AA-AT--AC-C--CTATT-G--TC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238644 15 +   5703754 AA-AT--AC-C--CTATT-G--TC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8234 15 +     21866 AA-AT--AC-C--CTATT-G--TC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116287 16 +    313613 GA-AT--ACCC--ACATA-G--AG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 13
s Semnopithecus_entellus.k141_158471                         25940 15 +     27374 AA-AT--AC-C--CTATA-G--GC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29452 15 +     58920 AA-AT--AC-C--CTATA-G--GC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15950 15 -     45317 AA-AT--AC-C--CTATA-G--GC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23608 15 -     42441 AA-AT--AC-C--CTATA-G--GC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26286 15 -     29113 AA-AT--AC-C--CTATA-G--GC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29361 15 -     48123 AA-AT--AC-C--CTATA-G--GC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49607 15 +     77746 AA-GT--AC-C--CTGGA-G--AG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 13
s Solenodon_paradoxus.SolPar_flattened_line_126            1864566 15 -   1910179 AA-AT--AC-C--CTACA-G--AG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 10
s Sorex_araneus.JH798187.1                                 4671694 11 +  18376816 AA-AA--GC-A--TCAC-------
i Sorex_araneus.JH798187.1                               C 0 I 11
s Spermophilus_dauricus.KZ294078.1                         1868759 15 +   3870691 AA-AT--AC-A--CTATA-A--AG
i Spermophilus_dauricus.KZ294078.1                       C 0 I 13
s Spilogale_gracilis.SpiGra_flattened_line_13525              7140 15 -     97271 AA-AT--GC-C--CTATA-G--AT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 13
s Suricata_suricatta.SurSur_flattened_line_6629             125287 15 +    196729 AA-AT--AC-C--CTGTA-G--AG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 13
s Sus_scrofa.CM000828.4                                    6644158 15 +  69701581 AC-AT--AC-C--CTGTA-G--AG
i Sus_scrofa.CM000828.4                                  C 0 I 11
s Symphalangus_syndactylus.tarseq_199                       391548 15 +   1523678 AA-AT--AC-C--CTATA-G--AC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14706 15 +     22964 AA-TG--AC-A--CTGTA-G--AG
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 13
s Tamandua_tetradactyla.TamTet_scaffold_224794                3124 14 +      5583 AA-AT--AT-C--TGTTG-G---G
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 13
s Tapirus_indicus.TapInd_scaffold_7432                      192012 15 +    199430 AA-AT--AC-C--CTGCA-G--AG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 13
s Tapirus_terrestris.TapTer_scaffold_755                    105982 15 -    539355 AA-AT--AC-C--CTGCA-G--AG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 13
s Tarsius_lariang.k141_1733899                                1046 15 +      9917 AA-AT--AC-C--TTATA-G--AA
i Tarsius_lariang.k141_1733899                           C 0 I 13
s Tarsius_wallacei.k141_226975                                7844 15 +     20590 AA-AT--AC-C--TTATA-G--AA
i Tarsius_wallacei.k141_226975                           C 0 I 13
s Theropithecus_gelada.CM009954.1                           353800 15 - 186847797 AA-AT--AC-C--CTATA-G--GC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24483 15 -     33621 AA-AT--AT-C--TTATA-G--AG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 13
s Tolypeutes_matacus.TolMat_scaffold_31955                   20143  5 -     31044 AA-CC--A----------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 9
s Tonatia_saurophila.TonSau_scaffold_294                    480535 15 -    610378 AA-AC--AC-C--CTGTG-G--AG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 12
s Trachypithecus_auratus.k141_1189070                        21485 15 +     26378 AA-AT--AC-C--CTATA-G--GC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34161 15 -     78344 AA-AT--AC-C--CTATA-G--GC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20810 15 +     25722 AA-AT--AC-C--CTATA-G--GC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29117 15 -     62838 AA-AT--AC-C--CTATA-G--GC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29161 15 +     46913 AA-AT--AC-C--CTATA-G--GC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9970 15 -     28527 AA-AT--AC-C--CTATA-G--GC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31052 15 -     64340 AA-AT--AC-C--CTATA-G--GC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29090 15 -     63452 AA-AT--AC-C--CTATA-G--GC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10537 15 +     22490 AA-AT--AC-C--CTATA-G--GC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3960 15 -      6147 AA-AT--AC-C--CTATA-G--GC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10873 15 -     13050 AA-AT--AC-C--CTATA-G--GC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256103 15 -   6242583 AA-AT--AC-C--CTATA-G--GC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2131 15 +     19340 AA-AT--AC-C--CTATA-G--GC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173863 17 -    200418 AA-ATATAA-C--CTGTA-G--AA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 13
s Trichechus_manatus.JH594705.1                            6480854 15 -  10818551 AA-AT--AT-C--CCATA-A--GG
i Trichechus_manatus.JH594705.1                          C 0 I 13
s Tupaia_chinensis.KB320699.1                              1834789 15 -   4065304 AA-AT--AT-C--TTGTG-G--AG
i Tupaia_chinensis.KB320699.1                            C 0 I 13
s Tupaia_tana.TupTan_flattened_line_394                       8806 15 -     70247 AA-AT--AT-C--TTGTG-G--AG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 13
s Tursiops_truncatus.MRVK01000835.1                       17366109 15 -  33153633 AA-AC--AC-C--CTGTA-G--AG
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 13
s Uropsilus_gracilis.UroGra_scaffold_46687                    4018 12 -     21056 ----T--AC-T--ATATA-G--AG
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 13
s Ursus_maritimus.KK499267.1                                182226 15 +   5085361 AA-AT--AC-C--CTATA-G--AG
i Ursus_maritimus.KK499267.1                             C 0 I 13
s Varecia_rubra.k141_787544                                  25640 15 -     30710 AA-AT--AC-C--CTCTA-G--AG
i Varecia_rubra.k141_787544                              C 0 I 13
s Varecia_variegata.k141_289850                              24547 15 -    147434 AA-AT--AC-C--CTCTA-G--AG
i Varecia_variegata.k141_289850                          C 0 I 13
s Vicugna_pacos.KN270157.1                                   76693 17 +   5488506 aa-at--at-gctGTGTA-G--AG
i Vicugna_pacos.KN270157.1                               C 0 I 13
s Vulpes_lagopus.VulLag_flattened_line_12041                105361 15 -    112863 AA-AT--AT-C--CTATA-T--AC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 13
s Xerus_inauris.XerIna_scaffold_2302                        174554 15 -    224448 AA-AT--AC-A--CTATG-G--AG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 13
s Zalophus_californianus.ZalCal_flattened_line_17732         29265 15 -     86975 AA-AT--AC-A--CTATA-G--AG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 10
s Zapus_hudsonius.ZapHud_scaffold_286923                       384 15 -      1899 AC-AT--AC-C--CTATA-G--AG
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 I 13
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1398 15 +      2126 AA-AT--AC-C--CTGTA-G--AG
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 I 13
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Echinops_telfairi.JH980293.1                            62855344  1 - 111700974 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5853 2 +     36723 TA
s Acinonyx_jubatus.LLWD01001279.1                           813279 2 +   1699592 CT
i Acinonyx_jubatus.LLWD01001279.1                        I 13 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25525 2 +     63021 CA
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 14 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415740 2 +  29979442 CA
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 13 C 0
s Ailurus_fulgens.LNAC01001112.1                            216076 2 +    347723 TA
i Ailurus_fulgens.LNAC01001112.1                         I 13 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18491 2 -     61208 AA
i Allactaga_bullata.AllBul_scaffold_20030                I 13 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48491 2 +     53615 TA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           522 2 +     13857 TA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17073 2 -     21945 TA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18758 2 +     32033 TA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72601 2 -     84148 TA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44840 2 -     78289 TA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44279 2 +     55831 TA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42729 2 -     64179 TA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24363 2 -     24835 TA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41354 2 +     45454 TA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47003 2 +     70886 TA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9176 2 +     30854 TA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33310 2 +     42133 TA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585723 2 +   2318259 TG
i Ammotragus_lervia.NIVO01071767.1                       I 12 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177525 2 -    412891 TT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 12 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50830 2 -     68529 TG
i Antilocapra_americana.AntAmePen_scaffold_21030         I 13 C 0
s Aotus_azarae.k141_887050                                    1567 2 +     17741 TA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2192 2 -     15923 TA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672474 2 +   5030052 TA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2468 2 -     16391 TA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2027 2 -     17186 TA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20662 2 -     45910 TA
i Arctocebus_calabarensis.k141_1364444                   I 12 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5791 2 -     15198 TT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 12 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275064 2 +  21539123 TA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11232 2 +     48076 TA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6367 2 -     28759 TA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33921 2 +     44353 TA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49292 2 -     71267 TA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23350 2 -     33135 TA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6632 2 +     11645 TA
i Avahi_laniger.k141_2756659                             I 13 C 0
s Avahi_peyrierasi.k141_1823318                               6640 2 -     19611 TA
i Avahi_peyrierasi.k141_1823318                          I 13 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963873 2 -  23207421 TA
i Balaenoptera_acutorostrata.KI537508.1                  I 13 C 0
s Balaenoptera_bonaerensis.DF411050.1                          373 2 -     25979 TA
i Balaenoptera_bonaerensis.DF411050.1                    I 13 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86731 2 +    124022 TG
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 12 C 0
s Bison_bison.KN261452.1                                     22266 2 +    288883 TG
i Bison_bison.KN261452.1                                 I 13 C 0
s Bos_indicus.CM003047.1                                  20356658 2 +  48749331 TG
i Bos_indicus.CM003047.1                                 I 13 C 0
s Bos_mutus.JH880303.1                                      755222 2 +   1948126 TG
i Bos_mutus.JH880303.1                                   I 13 C 0
s Bos_taurus.CM000203.6                                   27545364 2 -  45695690 TG
i Bos_taurus.CM000203.6                                  I 13 C 0
s Bubalus_bubalis.KI419123.1                               1530385 2 -   4408762 TG
i Bubalus_bubalis.KI419123.1                             I 13 C 0
s Cacajao_ayresi.k141_96119                                   8241 2 +     28062 TA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43535 2 -     91139 TA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21061 2 +     95584 TA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20974 2 +    119600 TA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10547 2 +     18648 TA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10082 2 -     13885 TA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2152 2 -      8861 TA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454544 2 + 189096842 TA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2067 2 +      8664 TA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631389 2 +  17673402 TG
i Camelus_bactrianus.KN276810.1                          I 13 C 0
s Camelus_dromedarius.KN272107.1                           4665675 2 +   7040546 TG
i Camelus_dromedarius.KN272107.1                         I 13 C 0
s Camelus_ferus.KB017975.1                                 1209335 2 +   1652518 TG
i Camelus_ferus.KB017975.1                               I 13 C 0
s CanFam4.chr16                                           42505758 2 +  60362399 TG
i CanFam4.chr16                                          I 13 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9394 2 -     23171 TG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 13 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222737 2 +   9314153 TG
i Canis_lupus_dingo.QKWQ01000480.1                       I 13 C 0
s Canis_lupus_familiaris.chr16                            41615872 2 +  59632846 TG
i Canis_lupus_familiaris.chr16                           I 13 C 0
s Canis_lupus_orion.HG994398.1                            45107453 2 -  63665305 TG
i Canis_lupus_orion.HG994398.1                           I 13 C 0
s Capra_aegagrus.CM003241.1                               27409452 2 -  46296322 TG
i Capra_aegagrus.CM003241.1                              I 12 C 0
s Capra_hircus.CM004588.1                                 26591726 2 +  44709034 TG
i Capra_hircus.CM004588.1                                I 12 C 0
s Carlito_syrichta.NW_007259797.1                           270841 2 +    496798 TA
i Carlito_syrichta.NW_007259797.1                        I 13 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                647 2 +      9923 TC
i Carollia_perspicillata.CarPer_scaffold_107871          I 12 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28043 2 -     39886 TA
i Castor_canadensis.CasCan_scaffold_39952                I 13 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79927 2 -    217609 TA
i Catagonus_wagneri.CatWag_scaffold_2839                 I 13 C 0
s Cavia_aperea.AVPZ01000300.1                              4996790 2 +  23392119 TA
i Cavia_aperea.AVPZ01000300.1                            I 13 C 0
s Cavia_porcellus.DS562891.1                               5000231 2 +  23407841 TA
i Cavia_porcellus.DS562891.1                             I 13 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63312 2 -     66877 TA
i Cavia_tschudii.CavTsc_scaffold_23560                   I 13 C 0
s Cebuella_niveiventris.k141_592277                           5465 2 -     12580 TA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43523 2 +     53515 TA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371451 2 -  26074798 TA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8340 1 -     34880 T-
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67435 2 -     89041 TA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2801 2 -      5494 TA
i Cephalopachus_bancanus.k141_1689090                    I 13 C 0
s Ceratotherium_simum.JH767749.1                          15492561 2 -  27778364 TA
i Ceratotherium_simum.JH767749.1                         I 13 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19394 2 +     27315 TA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 13 C 0
s Cercocebus_atys.KQ010504.1                                141647 2 -   4669795 TA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45390 2 +     47900 TA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            819 2 -     14410 TA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45203 2 -    148725 TA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27405 2 -     40656 TA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7369 2 +     20796 TA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12487 2 -     17524 TA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28214 2 -     34525 TA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11990 2 -     25376 TA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364584 2 -  39242232 TA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270304 2 +  21565898 TA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32672 2 -     45857 TA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27573 2 -     32606 TA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3735 2 +      8499 TA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26131 2 +     70610 TA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23099 2 +     36323 TA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13065 2 -     19938 GA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 9 C 0
s Cheirogaleus_major.k141_666340                             31005 2 -     33796 TA
i Cheirogaleus_major.k141_666340                         I 13 C 0
s Cheirogaleus_medius.k141_759766                             5522 2 -     15404 TA
i Cheirogaleus_medius.k141_759766                        I 13 C 0
s Cheracebus_lucifer.k141_2312002                             9341 2 -     32913 TA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19754 2 -     40346 TA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20009 2 +    216457 TA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19802 2 +     39636 TA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239146 2 -   2543920 TA
i Chinchilla_lanigera.JH722012.1                         I 13 C 0
s Chiropotes_albinasus.k141_1946120                           4397 2 +      5346 TA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42872 2 -    112038 TA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8443 2 +     34062 TA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343993 2 +  18827391 TA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10541 2 -     44032 TA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305318 2 - 135778131 TA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15192 2 +     15858 TA
i Choloepus_didactylus.ChoDid_scaffold_70559             I 10 C 0
s Choloepus_hoffmanni.KN194906.1                            606767 2 -    839153 TA
i Choloepus_hoffmanni.KN194906.1                         I 10 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1191 2 +      2406 TA
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          I 13 I 42
s Colobus_angolensis.KN981557.1                             409723 2 -   2368649 TA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379604 2 - 200372422 TG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3161 2 -     84244 TG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807622 2 +  53390261 TA
i Condylura_cristata.JH655891.1                          I 13 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3154 2 -      8242 TT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 13 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44665 2 -     83289 TA
i Cricetomys_gambianus.CriGam_scaffold_14425             I 13 C 0
s Cricetulus_griseus.LT883664.1                          213115237 2 - 224834208 TA
i Cricetulus_griseus.LT883664.1                          I 13 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9779 2 +     12657 TA
i Crocidura_indochinensis.CroInd_scaffold_77846          I 9 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4731 2 +     87169 CT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 13 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645360 2 -   1526836 TA
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 13 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18700 2 +     50838 TA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 13 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4707 2 +     36344 TA
i Cuniculus_paca.CunPac_flattened_line_7025              I 13 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28483 2 +     75252 TA
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 13 C 0
s Dasypus_novemcinctus.JH564415.1                          2110417 2 -   2246927 AA
i Dasypus_novemcinctus.JH564415.1                        I 9 C 0
s Daubentonia_madagascariensis.ctg71                        292941 2 +  12879189 TA
i Daubentonia_madagascariensis.ctg71                     I 13 C 0
s Delphinapterus_leucas.KZ290073.1                        18632281 2 -  35494412 TG
i Delphinapterus_leucas.KZ290073.1                       I 13 C 0
s Desmodus_rotundus.KZ672366.1                              330842 2 -   2620052 TT
i Desmodus_rotundus.KZ672366.1                           I 26 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664845 2 -   1390856 TA
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 13 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139638 2 -    198055 TA
i Diceros_bicornis.DicBicMic_scaffold_5955               I 13 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99234 2 -    115145 TA
i Dinomys_branickii.DinBra_scaffold_10381                I 13 C 0
s Dipodomys_ordii.KN672350.1                              18950856 2 -  37912305 TA
i Dipodomys_ordii.KN672350.1                             I 10 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5781 2 -     10735 TA
i Dipodomys_stephensi.DipSte_scaffold_89095              I 10 C 0
s Echinops_telfairi.JH980293.1                            62855345 2 - 111700974 tg
i Echinops_telfairi.JH980293.1                           I 1 C 0
s Eidolon_helvum.AWHC01266696.1                               6618 2 +     19438 TT
i Eidolon_helvum.AWHC01266696.1                          I 13 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240093 2 -    607251 TG
i Elaphurus_davidianus.JRFZ01104969.1                    I 13 C 0
s Elephantulus_edwardii.JH947257.1                         9109262 2 -  10337057 CA
i Elephantulus_edwardii.JH947257.1                       I 14 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31383 2 +    110024 TA
i Ellobius_lutescens.LOEQ01008920.1                      I 13 C 0
s Ellobius_talpinus.LOJH01026522.1                           13354 2 +     18970 TA
i Ellobius_talpinus.LOJH01026522.1                       I 13 C 0
s Enhydra_lutris.KZ291758.1                               24916489 2 +  41312741 TA
i Enhydra_lutris.KZ291758.1                              I 13 C 0
s Eptesicus_fuscus.JH977646.1                             12579263 2 +  14770903 TA
i Eptesicus_fuscus.JH977646.1                            I 13 C 0
s Equus_asinus.JREZ01000139.1                              3041722 2 -   4378816 TA
i Equus_asinus.JREZ01000139.1                            I 13 C 0
s Equus_caballus.CM000403.2                               21375660 2 +  39960074 TA
i Equus_caballus.CM000403.2                              I 13 C 0
s Equus_przewalskii.ATBW01110277.1                            1041 2 -      1194 TA
i Equus_przewalskii.ATBW01110277.1                       I 13 C 0
s Erinaceus_europaeus.JH835339.1                           3666430 2 +   7059049 TA
i Erinaceus_europaeus.JH835339.1                         I 13 C 0
s Erythrocebus_patas.Contig38                               263531 2 +  21539334 TA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71490 2 -    133382 TA
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 13 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202             1034 2 -      1170 TA
i Eubalaena_japonica.EubJap_flattened_line_247202        I 13 C 0
s Eulemur_albifrons.k141_51491                               15150 2 -     24895 TA
i Eulemur_albifrons.k141_51491                           I 13 C 0
s Eulemur_collaris.k141_601111                               42860 2 -     70999 TA
i Eulemur_collaris.k141_601111                           I 13 C 0
s Eulemur_coronatus.k141_384460                              86830 2 +    112731 TA
i Eulemur_coronatus.k141_384460                          I 13 C 0
s Eulemur_flavifrons.k141_433119                             43393 2 +     68309 TA
i Eulemur_flavifrons.k141_433119                         I 13 C 0
s Eulemur_fulvus.k141_636316                                 53717 2 -     65740 TA
i Eulemur_fulvus.k141_636316                             I 13 C 0
s Eulemur_macaco.k141_1562045                                24349 2 -     75513 TA
i Eulemur_macaco.k141_1562045                            I 13 C 0
s Eulemur_mongoz.k141_232305                                 48544 2 -     97555 TA
i Eulemur_mongoz.k141_232305                             I 13 C 0
s Eulemur_rubriventer.k141_1423786                            5268 2 +     30972 TA
i Eulemur_rubriventer.k141_1423786                       I 13 C 0
s Eulemur_rufus.k141_514691                                  42988 2 -     52037 TA
i Eulemur_rufus.k141_514691                              I 13 C 0
s Eulemur_sanfordi.k141_1122526                              59391 2 -    111500 TA
i Eulemur_sanfordi.k141_1122526                          I 13 C 0
s Felis_catus.CM001381.2                                 186247188 2 - 206538554 CT
i Felis_catus.CM001381.2                                 I 13 C 0
s Felis_catus_fca126.CM031415.1                          185116974 2 - 205367284 CT
i Felis_catus_fca126.CM031415.1                          I 13 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28071 2 -     30238 CT
i Felis_nigripes.FelNig_flattened_line_31944             I 13 C 0
s Fukomys_damarensis.KN121974.1                            2916788 2 -   3816255 TA
i Fukomys_damarensis.KN121974.1                          I 13 C 0
s Galago_moholi.ctg3793                                     126025 2 -    137831 TA
i Galago_moholi.ctg3793                                  I 12 C 0
s Galago_senegalensis.k141_991736                             9570 2 +     22493 TA
i Galago_senegalensis.k141_991736                        I 12 C 0
s Galagoides_demidoff.k141_561628                            21641 2 -     32986 TA
i Galagoides_demidoff.k141_561628                        I 12 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1533 2 -     28519 TA
i Galeopterus_variegatus.GalVar_scaffold_51812           I 13 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91796 2 -     95226 TG
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 13 C 0
s Glis_glis.GliGli_scaffold_33859                            34855 2 -     36801 TA
i Glis_glis.GliGli_scaffold_33859                        I 15 C 0
s Gorilla_beringei.k141_3358147                               6153 2 -      8343 TA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255168 2 - 186649187 TA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2355 2 -     78134 TA
i Graphiurus_murinus.GraMur_scaffold_10447               I 15 C 0
s Hapalemur_alaotrensis.k141_330369                          15075 2 -     40692 CA
i Hapalemur_alaotrensis.k141_330369                      I 13 C 0
s Hapalemur_gilberti.k141_646465                             36477 2 +     49394 CA
i Hapalemur_gilberti.k141_646465                         I 13 C 0
s Hapalemur_griseus.k141_763500                              61345 2 -     66874 CA
i Hapalemur_griseus.k141_763500                          I 13 C 0
s Hapalemur_meridionalis.k141_258450                         10219 2 -     42923 CA
i Hapalemur_meridionalis.k141_258450                     I 13 C 0
s Hapalemur_occidentalis.k141_578367                         17218 2 -     53142 CA
i Hapalemur_occidentalis.k141_578367                     I 13 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31164 2 -    327341 CT
i Helogale_parvula.HelPar_flattened_line_2585            I 13 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9470 2 +     48891 TG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 12 C 0
s Heterocephalus_glaber.JH602082.1                         1932764 2 -  22651954 TT
i Heterocephalus_glaber.JH602082.1                       I 13 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                1429 2 +      4291 TA
i Heterohyrax_brucei.HetBruBak_scaffold_154059           I 13 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7981 2 -     36432 TA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 12 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551975 2 -   1711038 TT
i Hipposideros_armiger.JXIK01000431.1                    I 13 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1414 2 -      2730 TT
i Hipposideros_galeritus.HipGal_scaffold_164997          I 13 C 0
s Hoolock_leuconedys.ctg274                                    143177 2 -    630532 TA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70328 2 +     83186 CT
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 13 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72227 2 +    143317 TA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 13 C 0
s Hylobates_agilis.k141_1155965                               6211 2 +     12352 TA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13395 2 +     55766 TA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052995 2 + 191637585 TA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801873 2 +  11177569 TA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7512 2 -    135385 TA
i Hystrix_cristata.HysCri_scaffold_5660                  I 13 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387208 2 +   7955117 TG
i Ictidomys_tridecemlineatus.JH393364.1                  I 13 C 0
s Indri_indri.k141_2415743                                    2776 2 +     11955 TA
i Indri_indri.k141_2415743                               I 13 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10382 2 -     16823 TA
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 13 C 0
s Jaculus_jaculus.JH725527.1                               1240243 2 +   9596543 AA
i Jaculus_jaculus.JH725527.1                             I 9 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72225 2 -     97402 TA
i Kogia_breviceps.KogBre_flattened_line_3970             I 13 C 0
s Lagothrix_lagothricha.k141_246028                          43617 2 +    110728 TA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63234 2 -     65777 TA
i Lasiurus_borealis.LasBor_scaffold_16567                I 13 C 0
s Lemur_catta.scaffold_24                                 14759868 2 +  30322482 CA
i Lemur_catta.scaffold_24                                I 13 C 0
s Leontocebus_fuscicollis.k141_2994775                        4531 2 -     13097 TA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4285 2 +      5940 TA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4115 2 -      5717 TA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10487 2 -     11567 TA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11868 2 -     12945 TA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9382 2 +     29618 TA
i Lepilemur_ankaranensis.k141_567626                     I 13 C 0
s Lepilemur_dorsalis.k141_387009                              9378 2 +     31569 TA
i Lepilemur_dorsalis.k141_387009                         I 13 C 0
s Lepilemur_ruficaudatus.k141_330196                          9388 2 +     24756 TA
i Lepilemur_ruficaudatus.k141_330196                     I 13 C 0
s Lepilemur_septentrionalis.k141_360456                       9388 2 +     16388 TA
i Lepilemur_septentrionalis.k141_360456                  I 13 C 0
s Leptonychotes_weddellii.KB714746.1                        813865 2 -   3914936 TA
i Leptonychotes_weddellii.KB714746.1                     I 13 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18232 2 +     24238 TA
i Lepus_americanus.LepAme_scaffold_56121                 I 16 C 0
s Lipotes_vexillifer.KE559953.1                             341567 2 +    662738 TA
i Lipotes_vexillifer.KE559953.1                          I 13 C 0
s Lophocebus_aterrimus.ctg367                               334532 2 -   1826925 TA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11726 2 +     19643 TA
i Loris_lydekkerianus.k141_2031736                       I 12 C 0
s Loris_tardigradus.ctg83                                  5045396 2 -   6120653 TA
i Loris_tardigradus.ctg83                                I 12 C 0
s Loxodonta_africana.GL010049.1                           39082064 2 +  43346337 AA
i Loxodonta_africana.GL010049.1                          I 13 C 0
s Lycaon_pictus.CM007581.1                                41615027 2 +  59628241 TG
i Lycaon_pictus.CM007581.1                               I 13 C 0
s Macaca_arctoides.k141_1757516                              45927 2 -     61512 TA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373589 2 -  60120075 TA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25851 2 +     30207 TA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             689 2 -      5035 TA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25804 2 +     30527 TA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36980 2 -     50087 TA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46724 2 +     51645 TA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415927 2 - 187317192 TA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400157 2 +  25927173 TA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49329 2 -     62418 TA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1866 2 +     14901 TA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45801 2 +     59329 TA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271709 2 +    668171 TA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   353 2 -      5049 TA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3507 2 +     17132 TA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223585 2 -    270270 CT
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 10 C 0
s Mandrillus_leucophaeus.scaffold280                        322997 2 +  24302211 TA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357828 2 -    752769 TA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673915 2 -    737560 TA
i Manis_javanica.JSZB01003497.1                          I 13 C 0
s Manis_pentadactyla.KN006162.1                             221211 2 +    317179 TA
i Manis_pentadactyla.KN006162.1                          I 13 C 0
s Marmota_marmota.CZRN01000018.1                           7501427 2 +  40650429 TG
i Marmota_marmota.CZRN01000018.1                         I 13 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150759 2 +    207569 TT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 13 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26587 2 -     74585 TA
i Mellivora_capensis.MelCap_flattened_line_19308         I 13 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50519 2 -    140813 TA
i Meriones_unguiculatus.MerUng_scaffold_7390             I 13 C 0
s Mesocricetus_auratus.KB708134.1                         17429621 2 +  29670104 TA
i Mesocricetus_auratus.KB708134.1                        I 13 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87851 2 +     93471 TA
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 13 C 0
s Mico_argentatus.k141_582562                                10654 2 +     17804 TA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11154 2 -     12984 TA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19470 2 -     26561 TA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985218 2 +  93316391 TA
i Microcebus_murinus.CM007674.1                          I 13 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46602 2 +    145209 TG
i Microgale_talazaci.MicTal_scaffold_6613                I 64 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185447 2 +    200668 GT
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 12 C 0
s Microtus_ochrogaster.CM001695.1                         15962823 2 +  27267610 TA
i Microtus_ochrogaster.CM001695.1                        I 13 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363599 2 -   8254450 TA
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42506 2 -     48117 TA
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         23031 2 -     27822 TA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8876 2 +     27589 TA
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 13 C 0
s Mirza_zaza.k141_766280                                     53001 2 -     62432 TA
i Mirza_zaza.k141_766280                                 I 13 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359956 2 +    437263 TG
i Monodon_monoceros.MonMon_M_scaffold_103                I 13 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179676 2 +    366855 TG
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 13 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25918 2 -     82753 TG
i Moschus_moschiferus.MosMos_scaffold_13123              I 13 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18915 2 -     63510 CT
i Mungos_mungo.MunMun_flattened_line_18455               I 13 C 0
s Murina_feae.MurFea_scaffold_17764                          39576 2 +     47283 TA
i Murina_feae.MurFea_scaffold_17764                      I 13 C 0
s Mus_caroli.LT608237.1                                   35593543 2 + 120012414 TA
i Mus_caroli.LT608237.1                                  I 14 C 0
s Mus_musculus.chr8                                       41687932 2 + 129401213 TA
i Mus_musculus.chr8                                      I 14 C 0
s Mus_spretus.CM004101.1                                  39497225 2 + 130317789 TA
i Mus_spretus.CM004101.1                                 I 14 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83911 2 -     86153 TA
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 15 C 0
s Mustela_putorius.JH418006.1                             14355511 2 +  14710649 TA
i Mustela_putorius.JH418006.1                            I 13 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63485 2 +     67721 TA
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 13 C 0
s Myotis_davidii.KB100139.1                                4387995 2 +   6019432 TA
i Myotis_davidii.KB100139.1                              I 13 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120160 2 +    130748 TA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 13 C 0
s Nannospalax_galili.KL204047.1                             946668 2 +   3037898 TA
i Nannospalax_galili.KL204047.1                          I 13 C 0
s Nasalis_larvatus.k141_1350636                              29680 2 +     34575 TA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232634 2 -   7148211 CG
i Neophocaena_asiaeorientalis.KZ687982.1                 I 13 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128644 2 -    149072 TA
i Noctilio_leporinus.NocLep_scaffold_7894                I 13 C 0
s Nomascus_annamensis.k141_1771965                           54103 2 -    132029 TA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10198 2 -     16345 TA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16083 2 +     22201 TA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414304 2 -  22158432 TA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26481 2 -     54323 TA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198623 2 +   9404916 TG
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 13 C 0
s Nycticebus_bengalensis.LG01                             93638626 2 + 196305487 TA
i Nycticebus_bengalensis.LG01                            I 12 C 0
s Nycticebus_coucang.k141_1296080                             1229 2 -      9413 TA
i Nycticebus_coucang.k141_1296080                        I 12 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566006 2 - 199412804 TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 12 C 0
s Ochotona_princeps.JH802162.1                             2557294 2 -   3988456 TA
i Ochotona_princeps.JH802162.1                           I 18 C 0
s Octodon_degus.JH651603.1                                11055438 2 -  11899542 TA
i Octodon_degus.JH651603.1                               I 13 C 0
s Odobenus_rosmarus.KB229312.1                             1452082 2 +   2017862 TA
i Odobenus_rosmarus.KB229312.1                           I 10 C 0
s Odocoileus_virginianus.KZ100018.1                         436686 2 -    630418 CG
i Odocoileus_virginianus.KZ100018.1                      I 13 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14679 2 +    150152 TG
i Okapia_johnstoni.LVCL01S0005463.1                      I 13 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93180 2 -    140218 TA
i Ondatra_zibethicus.OndZib_scaffold_7387                I 13 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4060 2 -     41509 TA
i Onychomys_torridus.OnyTor_scaffold_28377               I 13 C 0
s Orcinus_orca.KB316932.1                                  8103024 2 +  10937097 TA
i Orcinus_orca.KB316932.1                                I 13 C 0
s Orycteropus_afer.OryAfe_flattened_line_1069005               382 2 -       505 TA
i Orycteropus_afer.OryAfe_flattened_line_1069005         N 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104026 2 - 174332312 TG
i Oryctolagus_cuniculus.CM000791.1                       I 16 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39668 2 +    559221 TG
i Otocyon_megalotis.JAEUCK010005147.1                    I 13 C 0
s Otolemur_crassicaudatus.k141_649260                        41171 2 -     51505 TA
i Otolemur_crassicaudatus.k141_649260                    I 12 C 0
s Otolemur_garnettii.GL873799.1                             354175 2 +   1103335 TA
i Otolemur_garnettii.GL873799.1                          I 12 C 0
s Ovis_aries.CM001607.2                                   26404590 2 -  44047080 TG
i Ovis_aries.CM001607.2                                  I 12 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5109 2 +     17875 TG
i Ovis_canadensis.OviCan_scaffold_67953                  I 12 C 0
s Pan_troglodytes.CM009242.2                               1473197 2 - 189151597 TA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24894 2 -    230217 CT
i Panthera_onca.PanOnc_flattened_line_3271               I 13 C 0
s Panthera_pardus.KV860321.1                              18462220 2 -  18783137 CT
i Panthera_pardus.KV860321.1                             I 13 C 0
s Panthera_tigris.KE722367.1                               3972879 2 +   8748460 CT
i Panthera_tigris.KE722367.1                             I 13 C 0
s Pantholops_hodgsonii.KE114653.1                          1616118 2 +   2937107 TG
i Pantholops_hodgsonii.KE114653.1                        I 12 C 0
s Papio_anubis.CM001495.2                                   243829 2 - 183742232 TA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10291 2 +     21308 CA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292864 2 -  20919399 TA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22939 2 -     27687 TA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16085 2 +     16796 TA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22896 2 -     23640 TA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15491 2 +     78924 CT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 13 C 0
s Perodicticus_ibeanus.k141_1921260                          27507 2 +     31479 TA
i Perodicticus_ibeanus.k141_1921260                      I 12 C 0
s Perodicticus_potto.k141_1854441                            19876 2 -     24908 TA
i Perodicticus_potto.k141_1854441                        I 12 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2209 2 +      9367 AA
i Perognathus_longimembris.PerPac_flattened_line_89005   I 10 C 0
s Peromyscus_maniculatus.KI615324.1                         247257 2 +  18517816 TA
i Peromyscus_maniculatus.KI615324.1                      I 13 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32352 2 -     56120 TG
i Petromus_typicus.PetTyp_scaffold_17301                 I 13 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4550 2 -     63832 CG
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 13 C 0
s Piliocolobus_badius.k141_2704958                            3115 2 +     55023 TA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2653 2 -     89929 TA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3243 2 +     40849 TA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254917 2 +  14605196 TA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4412 2 +     22231 TA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 13 C 0
s Pithecia_albicans.k141_1239476                             65239 2 +    207309 TA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6331 2 -     25401 TA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32075 2 +     58159 TA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32351 2 +     63561 TA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32111 2 +     51148 TA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557081 2 -   4542175 TA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32095 2 +     51125 TA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1548 2 +     19503 TA
i Platanista_gangetica.PlaMin_flattened_line_83166       I 13 C 0
s Plecturocebus_bernhardi.k141_2549090                        8506 2 +     39866 TA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3588 2 -      9282 TA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42992 2 -     87950 TA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43388 2 -     88961 TA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8084 2 -     39403 TA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43035 2 +     87928 TA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8083 2 -     60166 TA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15020 2 -     67232 TA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42936 2 -     90634 TA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44403 2 +     89403 TA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178306 2 - 189387572 TA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193123 2 -   9816681 TA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28260 2 +     69807 TA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45441 2 -     80239 TA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 1254 2 +      7663 TA
i Procavia_capensis.ProCapCap_scaffold_165387            I 13 C 0
s Prolemur_simus.MPIZ01000396.1                            1983016 2 +   4620579 CA
i Prolemur_simus.MPIZ01000396.1                          I 13 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566527 2 -   2598838 TA
i Propithecus_coquerelli.NW_012148875.1                  I 13 C 0
s Propithecus_coronatus.k141_209299                           4165 2 -      7103 TA
i Propithecus_coronatus.k141_209299                      I 13 C 0
s Propithecus_diadema.k141_153680                             4762 2 -     11706 TA
i Propithecus_diadema.k141_153680                        I 13 C 0
s Propithecus_edwardsi.k141_635656                            8500 2 -     30655 TA
i Propithecus_edwardsi.k141_635656                       I 13 C 0
s Propithecus_perrieri.k141_1496898                          34813 2 +     46564 TA
i Propithecus_perrieri.k141_1496898                      I 13 C 0
s Propithecus_tattersalli.k141_1127767                       95092 2 -     98465 TA
i Propithecus_tattersalli.k141_1127767                   I 13 C 0
s Propithecus_verreauxi.k141_1047036                          8731 2 +     35169 TA
i Propithecus_verreauxi.k141_1047036                     I 13 C 0
s Psammomys_obesus.NESX01036366.1                            37863 2 +     52041 TA
i Psammomys_obesus.NESX01036366.1                        I 14 C 0
s Pteronotus_parnellii.KE847780.1                            52569 2 -     66298 TA
i Pteronotus_parnellii.KE847780.1                        I 13 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5084 2 -     18639 TA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 13 C 0
s Pteropus_alecto.KB030862.1                               5841158 2 -  28871421 TT
i Pteropus_alecto.KB030862.1                             I 13 C 0
s Pteropus_vampyrus.KN525825.1                             3537673 2 -   4952924 TT
i Pteropus_vampyrus.KN525825.1                           I 13 C 0
s Puma_concolor.QAVW01001104.1                            18099537 2 +  38429054 CT
i Puma_concolor.QAVW01001104.1                           I 13 C 0
s Pygathrix_cinerea.k141_1153803                             27636 2 +     91421 TA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154120 2 -   7812017 TA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8493 2 +     72585 TA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53603 2 +     55069 TG
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 13 C 0
s Rattus_norvegicus.chr16                                 37023148 2 -  90668790 TA
i Rattus_norvegicus.chr16                                I 14 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915137 2 +   3329780 TT
i Rhinolophus_sinicus.LVEH01000134.1                     I 13 C 0
s Rhinopithecus_bieti.k119_778604                             2214 2 +      7119 TA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122830 2 + 195417433 TA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237056 2 -   7961872 TA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75203 2 -    116970 TT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 13 C 0
s Saguinus_bicolor.k141_1429097                               4395 2 +     27962 TA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4289 2 +      6077 TA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4379 2 +      5971 TA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4300 2 +      5932 TA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2642 2 -      4390 TA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392079 2 - 209938924 TA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4249 2 +      5979 TA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                818 2 -     22275 TA
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8278 2 +     16473 TG
i Saiga_tatarica.SaiTat_scaffold_39512                   I 12 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109414 2 + 121099817 TA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30981 2 -     47369 TA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31367 2 -     79414 TA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28058 2 -     34454 TA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15459 2 -     22428 TA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30613 2 -     47109 TA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238659 2 +   5703754 TA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8249 2 +     21866 TA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116316 2 +    313613 TA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 13 C 0
s Semnopithecus_entellus.k141_158471                         25955 2 +     27374 TA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29467 2 +     58920 TA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15965 2 -     45317 TA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23623 2 -     42441 TA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26301 2 -     29113 TA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29376 2 -     48123 TA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49635 2 +     77746 TC
i Sigmodon_hispidus.SigHis_scaffold_20193                I 13 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864591 2 -   1910179 TA
i Solenodon_paradoxus.SolPar_flattened_line_126          I 10 C 0
s Sorex_araneus.JH798187.1                                 4671716 2 +  18376816 TA
i Sorex_araneus.JH798187.1                               I 11 C 0
s Spermophilus_dauricus.KZ294078.1                         1868787 2 +   3870691 TG
i Spermophilus_dauricus.KZ294078.1                       I 13 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7168 2 -     97271 TA
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 13 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125315 2 +    196729 CT
i Suricata_suricatta.SurSur_flattened_line_6629          I 13 C 0
s Sus_scrofa.CM000828.4                                    6644184 2 +  69701581 TA
i Sus_scrofa.CM000828.4                                  I 11 C 0
s Symphalangus_syndactylus.tarseq_199                       391563 2 +   1523678 TA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14734 2 +     22964 TA
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 13 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3151 2 +      5583 TA
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 13 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192040 2 +    199430 TA
i Tapirus_indicus.TapInd_scaffold_7432                   I 13 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106010 2 -    539355 TA
i Tapirus_terrestris.TapTer_scaffold_755                 I 13 C 0
s Tarsius_lariang.k141_1733899                                1074 2 +      9917 TA
i Tarsius_lariang.k141_1733899                           I 13 C 0
s Tarsius_wallacei.k141_226975                                7872 2 +     20590 TA
i Tarsius_wallacei.k141_226975                           I 13 C 0
s Theropithecus_gelada.CM009954.1                           353815 2 - 186847797 TA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24511 2 -     33621 TA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 13 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20157 2 -     31044 GA
i Tolypeutes_matacus.TolMat_scaffold_31955               I 9 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480562 2 -    610378 TT
i Tonatia_saurophila.TonSau_scaffold_294                 I 12 C 0
s Trachypithecus_auratus.k141_1189070                        21500 2 +     26378 TA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34176 2 -     78344 TA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20825 2 +     25722 TA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29132 2 -     62838 TA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29176 2 +     46913 TA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9985 2 -     28527 TA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31067 2 -     64340 TA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29105 2 -     63452 TA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10552 2 +     22490 TA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3975 2 -      6147 TA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10888 2 -     13050 TA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256118 2 -   6242583 TA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2146 2 +     19340 TA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173893 2 -    200418 TA
i Tragulus_javanicus.TraJav_scaffold_3462                I 13 C 0
s Trichechus_manatus.JH594705.1                            6480882 2 -  10818551 TA
i Trichechus_manatus.JH594705.1                          I 13 C 0
s Tupaia_chinensis.KB320699.1                              1834817 2 -   4065304 TG
i Tupaia_chinensis.KB320699.1                            I 13 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8834 2 -     70247 TG
i Tupaia_tana.TupTan_flattened_line_394                  I 13 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366137 2 -  33153633 TG
i Tursiops_truncatus.MRVK01000835.1                      I 13 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4043 2 -     21056 TA
i Uropsilus_gracilis.UroGra_scaffold_46687               I 13 C 0
s Ursus_maritimus.KK499267.1                                182254 2 +   5085361 CA
i Ursus_maritimus.KK499267.1                             I 13 C 0
s Varecia_rubra.k141_787544                                  25668 2 -     30710 TA
i Varecia_rubra.k141_787544                              I 13 C 0
s Varecia_variegata.k141_289850                              24575 2 -    147434 TA
i Varecia_variegata.k141_289850                          I 13 C 0
s Vicugna_pacos.KN270157.1                                   76723 2 +   5488506 TG
i Vicugna_pacos.KN270157.1                               I 13 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105389 2 -    112863 TG
i Vulpes_lagopus.VulLag_flattened_line_12041             I 13 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174582 2 -    224448 TG
i Xerus_inauris.XerIna_scaffold_2302                     I 13 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29290 2 -     86975 TA
i Zalophus_californianus.ZalCal_flattened_line_17732     I 10 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       412 2 -      1899 AA
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 13 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1426 2 +      2126 TA
i Ziphius_cavirostris.ZipCav_flattened_line_504766       I 13 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Myotis_myotis.MyoMyo_scaffold_66571                         2619 3 +     18357 I
e Myotis_lucifugus.GL429869.1                               383810 3 +   4330536 I
e Myotis_brandtii.KE162005.1                               9793851 3 +  10118263 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Aplodontia_rufa.AprRuf_scaffold_46868                      16547 1 -     32367 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5855 2 +     36723 GG
s Acinonyx_jubatus.LLWD01001279.1                           813281 2 +   1699592 GA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25527 2 +     63021 GG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415742 2 +  29979442 GG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216078 2 +    347723 GG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18493 2 -     61208 GG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48493 2 +     53615 GG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           524 2 +     13857 GG
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17075 2 -     21945 GG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18760 2 +     32033 GG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72603 2 -     84148 GG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44842 2 -     78289 TG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44281 2 +     55831 GG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42731 2 -     64179 GG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24365 2 -     24835 GG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41356 2 +     45454 GG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47005 2 +     70886 TG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9178 2 +     30854 GG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33312 2 +     42133 GG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585725 2 +   2318259 GG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177527 2 -    412891 GG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50832 2 -     68529 GG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1569 2 +     17741 GG
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2194 2 -     15923 GG
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672476 2 +   5030052 GG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2470 2 -     16391 GG
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2029 2 -     17186 GG
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20664 2 -     45910 GG
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5793 2 -     15198 GG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275066 2 +  21539123 GG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11234 2 +     48076 GG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6369 2 -     28759 GG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33923 2 +     44353 GG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49294 2 -     71267 GG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23352 2 -     33135 GG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6634 2 +     11645 GG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6642 2 -     19611 GG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963875 2 -  23207421 GG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          375 2 -     25979 GG
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86733 2 +    124022 GG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22268 1 +    288883 -G
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356660 1 +  48749331 -G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755224 1 +   1948126 -G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545366 1 -  45695690 -G
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530387 1 -   4408762 -G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8243 2 +     28062 GG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43537 2 -     91139 GG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21063 2 +     95584 GG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20976 2 +    119600 GG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10549 2 +     18648 GG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10084 2 -     13885 GG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2154 2 -      8861 GG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454546 2 + 189096842 GG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2069 2 +      8664 GG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631391 2 +  17673402 GG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665677 2 +   7040546 GG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209337 2 +   1652518 GG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505760 2 +  60362399 GG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9396 2 -     23171 GG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222739 2 +   9314153 GG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615874 2 +  59632846 GG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107455 2 -  63665305 GG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409454 2 -  46296322 GG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591728 2 +  44709034 GG
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270843 2 +    496798 Ga
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                649 2 +      9923 AG
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28045 2 -     39886 GG
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79929 2 -    217609 GG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996792 2 +  23392119 GG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000233 2 +  23407841 GG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63314 2 -     66877 GG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5467 2 -     12580 GG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43525 2 +     53515 GG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371453 2 -  26074798 GA
i Cebus_albifrons.Contig27                               C 0 I 4
s Cebus_olivaceus.k141_1404781                                8341 2 -     34880 GA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67437 2 -     89041 GA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2803 2 -      5494 GA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492563 2 -  27778364 GG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19396 2 +     27315 GG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141649 2 -   4669795 GG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45392 2 +     47900 GG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            821 2 -     14410 GG
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45205 2 -    148725 GG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27407 2 -     40656 GG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7371 2 +     20796 GG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12489 2 -     17524 GG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28216 2 -     34525 GG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11992 2 -     25376 GG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364586 2 -  39242232 GG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270306 2 +  21565898 GG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32674 2 -     45857 GG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27575 2 -     32606 GG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3737 2 +      8499 GG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26133 2 +     70610 GG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23101 2 +     36323 GG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13067 2 -     19938 AG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31007 2 -     33796 GG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5524 2 -     15404 GG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9343 2 -     32913 GG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19756 2 -     40346 GG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20011 2 +    216457 GG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19804 2 +     39636 GG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239148 2 -   2543920 GG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4399 2 +      5346 GG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42874 2 -    112038 GG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8445 2 +     34062 GG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343995 2 +  18827391 GG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10543 2 -     44032 GG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305320 2 - 135778131 GG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15194 2 +     15858 GG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606769 2 -    839153 GG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1235 2 +      2406 GG
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          I 42 C 0
s Colobus_angolensis.KN981557.1                             409725 2 -   2368649 GG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379606 2 - 200372422 GG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3163 2 -     84244 GG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807624 2 +  53390261 GG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3156 2 -      8242 AA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44667 2 -     83289 GG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115239 2 - 224834208 GG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4733 2 +     87169 GA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645362 2 -   1526836 GG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18702 2 +     50838 GG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4709 2 +     36344 GG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28485 2 +     75252 GG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110419 2 -   2246927 AG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292943 2 +  12879189 GG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632283 2 -  35494412 GG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330844 2 -   2620052 GG
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664847 2 -   1390856 GG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139640 2 -    198055 GG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99236 2 -    115145 GG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950858 2 -  37912305 GG
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5783 2 -     10735 GG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62855347 2 - 111700974 ag
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6620 1 +     19438 A-
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240095 2 -    607251 GG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9109264 2 -  10337057 GA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31385 2 +    110024 GG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13356 2 +     18970 GG
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916491 2 +  41312741 GG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579265 2 +  14770903 GG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041724 2 -   4378816 GG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375662 2 +  39960074 GG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                            1043 2 -      1194 GG
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666432 1 +   7059049 G-
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263533 2 +  21539334 GG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71492 2 -    133382 GG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202             1036 2 -      1170 GG
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               15152 2 -     24895 GG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42862 2 -     70999 GG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86832 2 +    112731 GA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43395 2 +     68309 GG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53719 2 -     65740 GG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24351 2 -     75513 GG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48546 2 -     97555 GG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5270 2 +     30972 GG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42990 2 -     52037 GG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59393 2 -    111500 GG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247190 2 - 206538554 GA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116976 2 - 205367284 GA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28073 2 -     30238 GA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916790 2 -   3816255 GG
i Fukomys_damarensis.KN121974.1                          C 0 I 3
s Galago_moholi.ctg3793                                     126027 2 -    137831 GG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9572 2 +     22493 GG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21643 2 -     32986 GG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1535 2 -     28519 GG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91798 2 -     95226 GG
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34857 2 -     36801 GG
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6155 2 -      8343 GG
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255170 2 - 186649187 GG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2357 2 -     78134 GG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15077 2 -     40692 GG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36479 2 +     49394 GG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61347 2 -     66874 GG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10221 2 -     42923 GG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17220 2 -     53142 GG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31166 2 -    327341 GA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9472 2 +     48891 GG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932766 2 -  22651954 GG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                1431 2 +      4291 GA
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7983 2 -     36432 GG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551977 2 -   1711038 GA
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1416 2 -      2730 AA
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143179 2 -    630532 GG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70330 2 +     83186 GA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72229 2 +    143317 GG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6213 2 +     12352 GG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13397 2 +     55766 GG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052997 2 + 191637585 GG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801875 2 +  11177569 GG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7514 2 -    135385 GG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387210 2 +   7955117 GG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2778 2 +     11955 GG
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10384 2 -     16823 GG
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240245 2 +   9596543 GA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72227 2 -     97402 GG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43619 2 +    110728 GG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63236 2 -     65777 GG
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14759870 2 +  30322482 GG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4533 2 -     13097 GG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4287 2 +      5940 GG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4117 2 -      5717 GG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10489 2 -     11567 GG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11870 2 -     12945 GG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9384 2 +     29618 GG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9380 2 +     31569 GG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9390 2 +     24756 GG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9390 2 +     16388 GG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813867 2 -   3914936 GG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18234 2 +     24238 GG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341569 2 +    662738 GG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334534 2 -   1826925 GG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11728 2 +     19643 GG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045398 2 -   6120653 GG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39082066 2 +  43346337 GA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615029 2 +  59628241 GG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45929 2 -     61512 GG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373591 2 -  60120075 GG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25853 2 +     30207 GG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             691 2 -      5035 GG
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25806 2 +     30527 GG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36982 2 -     50087 GG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46726 2 +     51645 GG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415929 2 - 187317192 GG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400159 2 +  25927173 GG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49331 2 -     62418 GG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1868 2 +     14901 GG
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45803 2 +     59329 GG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271711 2 +    668171 GG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   355 2 -      5049 GG
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3509 2 +     17132 GG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223587 1 -    270270 G-
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        322999 2 +  24302211 GG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357830 2 -    752769 GG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673917 2 -    737560 AG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221213 2 +    317179 AG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501429 2 +  40650429 GG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150761 2 +    207569 GG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26589 2 -     74585 GG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50521 2 -    140813 GG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429623 2 +  29670104 GG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87853 2 +     93471 GG
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10656 2 +     17804 GG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11156 2 -     12984 GG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19472 2 -     26561 GG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985220 2 +  93316391 GG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46604 2 +    145209 CG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185449 2 +    200668 GG
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962825 2 +  27267610 GG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363601 2 -   8254450 GG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42508 2 -     48117 GG
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23033 2 -     27822 GG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8878 2 +     27589 GG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53003 2 -     62432 GG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359958 2 +    437263 GG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179678 2 +    366855 GG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25920 2 -     82753 GG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18917 2 -     63510 GA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39578 2 +     47283 GA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593545 2 + 120012414 GG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687934 2 + 129401213 GG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497227 2 + 130317789 GG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83913 2 -     86153 TG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355513 2 +  14710649 GG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63487 2 +     67721 GG
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_davidii.KB100139.1                                4387997 2 +   6019432 GG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120162 2 +    130748 GG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946670 2 +   3037898 GG
i Nannospalax_galili.KL204047.1                          C 0 I 3
s Nasalis_larvatus.k141_1350636                              29682 2 +     34575 GG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232636 2 -   7148211 GG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128646 2 -    149072 GG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54105 2 -    132029 GG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10200 2 -     16345 GG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16085 2 +     22201 GG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414306 2 -  22158432 GG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26483 2 -     54323 GG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198625 2 +   9404916 GG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638628 2 + 196305487 GG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1231 2 -      9413 GG
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566008 2 - 199412804 GG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557296 2 -   3988456 GG
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055440 2 -  11899542 GG
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452084 2 +   2017862 GG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436688 2 -    630418 GG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14681 2 +    150152 GG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93182 2 -    140218 GG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4062 2 -     41509 GG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103026 2 +  10937097 GG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_1069005               384 2 -       505 GA
i Orycteropus_afer.OryAfe_flattened_line_1069005         C 0 I 59
s Oryctolagus_cuniculus.CM000791.1                       107104028 2 - 174332312 GG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39670 2 +    559221 GG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41173 2 -     51505 GG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354177 2 +   1103335 GG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404592 2 -  44047080 GG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5111 2 +     17875 GG
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473199 2 - 189151597 GG
i Pan_troglodytes.CM009242.2                             C 0 I 9
s Panthera_onca.PanOnc_flattened_line_3271                   24896 2 -    230217 GA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462222 2 -  18783137 GA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972881 2 +   8748460 GA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616120 2 +   2937107 GG
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243831 2 - 183742232 GG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10293 2 +     21308 GG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292866 2 -  20919399 GG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22941 2 -     27687 GG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16087 2 +     16796 GG
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22898 2 -     23640 GG
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15493 2 +     78924 GA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27509 2 +     31479 GG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            19878 2 -     24908 GG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2211 2 +      9367 GG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247259 2 +  18517816 GG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32354 2 -     56120 GG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4552 2 -     63832 GG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3117 2 +     55023 GG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2655 2 -     89929 GG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3245 2 +     40849 GG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254919 2 +  14605196 GG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4414 2 +     22231 AG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65241 2 +    207309 GG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6333 2 -     25401 GG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32077 2 +     58159 GG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32353 2 +     63561 GG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32113 2 +     51148 GG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557083 2 -   4542175 GG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32097 2 +     51125 GG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1550 2 +     19503 GG
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8508 2 +     39866 GG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3590 2 -      9282 GG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42994 2 -     87950 GG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43390 2 -     88961 GG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8086 2 -     39403 GG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43037 2 +     87928 GG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8085 2 -     60166 GG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15022 2 -     67232 GG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42938 2 -     90634 GG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44405 2 +     89403 GG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178308 2 - 189387572 GG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193125 2 -   9816681 GG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28262 2 +     69807 GG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45443 2 -     80239 GG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 1256 2 +      7663 GA
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 3
s Prolemur_simus.MPIZ01000396.1                            1983018 2 +   4620579 GG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566529 2 -   2598838 GG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4167 2 -      7103 GG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4764 2 -     11706 GG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8502 2 -     30655 GG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34815 2 +     46564 GG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95094 2 -     98465 GG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8733 2 +     35169 GG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37865 2 +     52041 GG
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52571 2 -     66298 GG
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5086 2 -     18639 GG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841160 1 -  28871421 G-
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537675 1 -   4952924 G-
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099539 2 +  38429054 GA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27638 2 +     91421 GG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154122 2 -   7812017 GG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8495 2 +     72585 GG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53605 2 +     55069 GG
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023150 2 -  90668790 AG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915139 2 +   3329780 GG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2216 2 +      7119 GG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122832 2 + 195417433 GG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237058 2 -   7961872 GG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75205 1 -    116970 G-
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4397 2 +     27962 GG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4291 2 +      6077 GG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4381 2 +      5971 GG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4302 2 +      5932 GG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2644 2 -      4390 GG
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392081 2 - 209938924 GG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4251 2 +      5979 GG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                820 2 -     22275 GG
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8280 2 +     16473 GG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109416 2 + 121099817 GG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30983 2 -     47369 GG
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31369 2 -     79414 GG
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28060 2 -     34454 GG
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15461 2 -     22428 GG
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30615 2 -     47109 GG
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238661 2 +   5703754 GA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8251 2 +     21866 GA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116318 2 +    313613 GG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25957 2 +     27374 GG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29469 2 +     58920 GG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15967 2 -     45317 GG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23625 2 -     42441 GG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26303 2 -     29113 GG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29378 2 -     48123 GG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49637 2 +     77746 GA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864593 2 -   1910179 GG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671718 1 +  18376816 T-
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868789 2 +   3870691 GG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7170 2 -     97271 GG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125317 2 +    196729 GA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644186 2 +  69701581 GG
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391565 2 +   1523678 GG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14736 2 +     22964 GG
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3153 2 +      5583 GG
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192042 2 +    199430 GG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106012 2 -    539355 GG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1076 2 +      9917 GG
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7874 2 +     20590 GG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353817 2 - 186847797 GG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24513 2 -     33621 GG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20159 2 -     31044 AG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480564 2 -    610378 GG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21502 2 +     26378 GG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34178 2 -     78344 GG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20827 2 +     25722 GG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29134 2 -     62838 GG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29178 2 +     46913 GG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9987 2 -     28527 GG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31069 2 -     64340 GG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29107 2 -     63452 GG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10554 2 +     22490 GG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3977 2 -      6147 GG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10890 2 -     13050 GG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256120 2 -   6242583 GG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2148 2 +     19340 GG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173895 2 -    200418 GG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480884 2 -  10818551 GA
i Trichechus_manatus.JH594705.1                          C 0 I 3
s Tupaia_chinensis.KB320699.1                              1834819 2 -   4065304 GG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8836 2 -     70247 GG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366139 2 -  33153633 GG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4045 2 -     21056 GG
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182256 2 +   5085361 GG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25670 2 -     30710 GG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24577 2 -    147434 GG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76725 2 +   5488506 GG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105391 2 -    112863 GG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174584 2 -    224448 GG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29292 2 -     86975 GG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       414 2 -      1899 GG
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1428 2 +      2126 GG
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Crocidura_indochinensis.CroInd_scaffold_77846               9781 0 +     12657 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Myotis_myotis.MyoMyo_scaffold_66571                         2619 3 +     18357 I
e Myotis_lucifugus.GL429869.1                               383810 3 +   4330536 I
e Myotis_brandtii.KE162005.1                               9793851 3 +  10118263 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Aplodontia_rufa.AprRuf_scaffold_46868                      16547 1 -     32367 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5857  9 +     36723 A-AG-C---A---TGT--T
s Acinonyx_jubatus.LLWD01001279.1                           813283  8 +   1699592 A--A-A---G---TAT--T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25529  9 +     63021 A-AA-G---G---TGT--T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415744  9 +  29979442 A-AG-T---G---TAT--T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216080  9 +    347723 A-AG-G---G---TAT--T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18495  9 -     61208 C-AG-G---G---TAT--T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48495  9 +     53615 A-AG-C---A---TGT--T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           526  9 +     13857 A-AG-C---A---TGT--T
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17077  9 -     21945 A-AG-C---A---TGT--T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18762  9 +     32033 A-AG-C---A---TGT--T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72605  9 -     84148 A-AT-T---A---TGT--T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44844  9 -     78289 A-AG-C---A---TGT--T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44283  9 +     55831 A-AT-T---A---TGT--T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42733  9 -     64179 A-AA-T---A---TGT--T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24367  9 -     24835 A-AA-T---A---TGT--T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41358  9 +     45454 A-AA-T---A---TGT--T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47007  9 +     70886 A-AG-C---A---TGT--T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9180  9 +     30854 A-AA-T---A---TGT--T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33314  9 +     42133 A-AA-T---A---TGT--T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585727  9 +   2318259 A-AC-A---A---TAT--T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177529  9 -    412891 A-AG-G---A---TAC--T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50834  9 -     68529 A-AC-A---A---TAT--T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1571  9 +     17741 A-AG-C---A---TGT--T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2196  9 -     15923 A-AG-C---A---TGT--T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672478  9 +   5030052 A-AG-C---A---TGT--T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2472  9 -     16391 A-AG-C---A---TGT--T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2031  9 -     17186 A-AG-C---A---TGT--T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16548  1 -     32367 ------------------T
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 1 C 0
s Arctocebus_calabarensis.k141_1364444                       20666  9 -     45910 A-AA-T---G---CTC--T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5795  9 -     15198 A-AG-G---G---TAC--T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275068  9 +  21539123 A-AG-C---A---TGT--T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11236  9 +     48076 A-AG-C---A---TGT--T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6371  9 -     28759 A-AG-C---A---TGT--T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33925  9 +     44353 A-AG-C---A---TGT--T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49296  9 -     71267 A-AG-C---A---TGT--T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23354  9 -     33135 A-AG-C---A---TGT--T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6636  9 +     11645 A-AG-G---G---TGT--T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6644  9 -     19611 A-AG-G---G---TGT--T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963877  9 -  23207421 A-AG-G---A---TTT--T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          377  9 -     25979 A-AG-G---A---TTT--T
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86735  9 +    124022 A-AC-A---A---TAT--T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22269  9 +    288883 A-AC-A---A---TAT--T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356661  9 +  48749331 A-AC-A---A---TAT--T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755225  9 +   1948126 A-AC-A---A---TAT--T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545367  9 -  45695690 A-AC-A---A---TAT--T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530388  9 -   4408762 A-AC-A---A---TAT--T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8245  9 +     28062 A-AG-C---A---TGT--T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43539  9 -     91139 A-AG-C---A---TGT--T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21065  9 +     95584 A-AG-C---A---TGT--T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20978  9 +    119600 A-AG-C---A---TGT--T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10551  9 +     18648 A-AG-C---A---TGT--T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10086  9 -     13885 A-AG-C---A---TGT--T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2156  9 -      8861 A-AG-C---A---TGT--T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454548  9 + 189096842 A-AG-C---A---TGT--T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2071  9 +      8664 A-AG-C---A---TGT--T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631393  9 +  17673402 A-AG-G---G---TAT--A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665679  9 +   7040546 A-AG-G---G---TAT--A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209339  9 +   1652518 A-AG-G---G---TAT--A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505762  9 +  60362399 A-AG-G---G---TAG--T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9398  9 -     23171 A-AG-G---G---TAG--T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222741  9 +   9314153 A-AG-G---G---TAG--T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615876  9 +  59632846 A-AG-G---G---TAG--T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107457  9 -  63665305 A-AG-G---G---TAG--T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409456  9 -  46296322 A-AC-A---A---TAT--T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591730  9 +  44709034 A-AC-A---A---TAT--T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270845  9 +    496798 a-aa-t---a---tgt--t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                651  9 +      9923 A-AG-G---G---TGC--T
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28047  9 -     39886 A-AG-A---G---TAT--T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79931  9 -    217609 A-AG-G---G---TAT--T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996794  9 +  23392119 A-AG-A---G---TAT--T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000235  9 +  23407841 A-AG-A---G---TAT--T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63316  9 -     66877 A-AG-A---G---TAT--T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5469  9 -     12580 A-AG-C---A---TGT--T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43527  9 +     53515 A-AG-C---A---TGT--T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  371459  5 -  26074798 ---------A---TGT--T
i Cebus_albifrons.Contig27                               I 4 I 1834
s Cebus_olivaceus.k141_1404781                                8343  9 -     34880 A-AG-C---A---TGT--T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67439  9 -     89041 A-AG-C---A---TGT--T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2805  9 -      5494 A-AA-T---A---TGT--T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492565  9 -  27778364 C-AG-G---G---TAT--T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19398  9 +     27315 C-AG-G---G---TAT--T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141651  9 -   4669795 A-AG-C---A---TGT--T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45394  9 +     47900 A-AG-C---A---TGT--T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            823  9 -     14410 A-AG-C---A---TGT--T
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45207  9 -    148725 A-AG-C---A---TGT--T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27409  9 -     40656 A-AG-C---A---TGT--T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7373  9 +     20796 A-AG-C---A---TGT--T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12491  9 -     17524 A-AG-C---A---TGT--T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28218  9 -     34525 A-AG-C---A---TGT--T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           11994  9 -     25376 A-AG-C---A---TGT--T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364588  9 -  39242232 A-AG-C---A---TGT--T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270308  9 +  21565898 A-AG-C---A---TGT--T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32676  9 -     45857 A-AG-C---A---TGT--T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27577  9 -     32606 A-AG-C---A---TGT--T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3739  9 +      8499 A-AG-C---A---TGT--T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26135  9 +     70610 A-AG-C---A---TGT--T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23103  9 +     36323 A-AG-C---A---TGT--T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13069  9 -     19938 T-T--G---GG-C-AT--T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31009  9 -     33796 A-AG-G---G---TGC--T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5526  9 -     15404 A-AG-G---G---TGC--T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9345  9 -     32913 A-AG-C---A---TGT--T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19758  9 -     40346 A-AG-C---A---TGT--T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20013  9 +    216457 A-AG-C---A---TGT--T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19806  9 +     39636 A-AG-C---A---TGT--T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239150  9 -   2543920 A-AG-A---G---tgt--t
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4401  9 +      5346 A-AG-C---A---TGT--T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42876  9 -    112038 A-AG-C---A---TGT--T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8447  9 +     34062 A-AG-C---A---TGT--T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                343997  9 +  18827391 A-AG-C---A---TGT--T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10545  9 -     44032 A-AG-C---A---TGT--T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305322  9 - 135778131 A-AG-C---A---TGT--T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15196  9 +     15858 A-A--G---GG-C-AT--T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606771  9 -    839153 A-A--G---GG-C-AT--T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1237  4 +      2406 T-TG-G-------------
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409727  9 -   2368649 A-AG-C---A---TGT--T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379608  9 - 200372422 A-AG-C---A---TGT--T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3165  9 -     84244 A-AG-C---A---TGT--T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807626 11 +  53390261 A-AA-GGG-A---CAT--C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3158  9 -      8242 A-AA-T---A---TAT--T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44669  4 -     83289 A-AG-A-------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 1
s Cricetulus_griseus.LT883664.1                          213115241  9 - 224834208 A-AG-G---G---AGT--T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9781  1 +     12657 ---T---------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4735  9 +     87169 A-AT-A---C---TAC--T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645364  9 -   1526836 A-AG-A---A---TCT--T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18704  9 +     50838 A-AG-A---G---TAT--T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4711  9 +     36344 A-AG-A---A---TAT--T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28487  9 +     75252 A-AG-A---G---TAT--T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110421  9 -   2246927 T-A--G---GG-C-AT--T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292945  9 +  12879189 A-AG-G---G---TGT--T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632285  9 -  35494412 A-AG-G---A---TAT--T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330846  9 -   2620052 A-AG-G---G---TAC--T
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664849  9 -   1390856 C-AG-G---G---TAT--T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139642  9 -    198055 C-AG-G---G---TAT--T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99238  9 -    115145 A-AG-G---G---TGT--T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950860  9 -  37912305 A-AA-G---G---TGT--T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5785  9 -     10735 A-AA-G---G---TGT--T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62855349  4 - 111700974 t-tg-a-------------
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6621  9 +     19438 A-AG-g---g---tat--t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240097  9 -    607251 A-AC-A---A---TAT--T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9109266  4 -  10337057 G-GG-A-------------
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31387  9 +    110024 A-AG-G---G---TGT--T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13358  9 +     18970 A-AG-G---G---TGT--T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916493  9 +  41312741 A-AG-G---G---TAT--T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579267  9 +  14770903 A-AG-G---G---TAC--T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041726  9 -   4378816 A-TG-G---G---TAT--T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375664  9 +  39960074 A-TG-G---G---TAT--T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.ATBW01110277.1                            1045  9 -      1194 A-TG-G---C---TAT--T
i Equus_przewalskii.ATBW01110277.1                       C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666433  2 +   7059049 ---G-G-------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 3
s Erythrocebus_patas.Contig38                               263535  9 +  21539334 A-AG-C---G---TGT--T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71494  9 -    133382 A-AG-G---A---TTT--T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202             1038  9 -      1170 A-AG-G---A---TTT--T
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               15154  9 -     24895 A-AG-C---G---TGT--T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42864  9 -     70999 A-AG-C---G---TGT--T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86834  9 +    112731 A-AG-C---G---TGT--T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43397  9 +     68309 A-AG-C---G---TGT--T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53721  9 -     65740 A-AG-C---G---TGT--T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24353  9 -     75513 A-AG-C---G---TGT--T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48548  9 -     97555 A-AG-A---G---TGT--T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5272  9 +     30972 A-AG-C---G---TGT--T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  42992  9 -     52037 A-AG-C---G---TGT--T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59395  9 -    111500 A-AG-C---G---TGT--T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247192  8 - 206538554 A--A-G---G---TAT--T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116978  8 - 205367284 A--A-G---G---TAT--T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28075  8 -     30238 A--A-G---G---TAT--T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916795  5 -   3816255 ---------G---TGT--T
i Fukomys_damarensis.KN121974.1                          I 3 C 0
s Galago_moholi.ctg3793                                     126029  9 -    137831 A-AA-T---G---TTA--T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9574  9 +     22493 A-AA-T---G---TTA--T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21645  9 -     32986 A-AA-T---G---TTC--T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1537  9 -     28519 A-AG-G---G---TAT--T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91800  9 -     95226 A-AC-A---A---TAT--T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34859 10 -     36801 AAAG-G---G---TAT--T
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6157  9 -      8343 A-AG-C---A---TGT--T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255172  9 - 186649187 A-AG-C---A---TGT--T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2359  9 -     78134 A-AG-G---G---TAT--T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15079  9 -     40692 A-AG-G---G---TGT--T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36481  9 +     49394 A-AG-G---G---TGT--T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61349  9 -     66874 A-AG-G---G---TGT--T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10223  9 -     42923 A-AG-G---G---TGT--T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17222  9 -     53142 A-AG-G---G---TGT--T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31168  9 -    327341 A-AA-G---G---TAT--T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9474  9 +     48891 A-AC-A---A---TAT--T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932768  9 -  22651954 A-AG-G---G---CAT--T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                1436  8 +      4291 ---------GGTATTT--G
i Heterohyrax_brucei.HetBruBak_scaffold_154059           I 3 I 44
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7985  9 -     36432 A-AG-G---A---TAT--T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551979  9 -   1711038 A-AA-G---G---TGT--T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1418  8 -      2730 A-A--A---G---TGT--T
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143181  9 -    630532 A-AG-C---A---TGT--T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70332  9 +     83186 A-GA-G---G---TAT--T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72231  9 +    143317 A-AG-A---G---CAT--T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6215  9 +     12352 A-AG-C---A---TGT--T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13399  9 +     55766 A-AG-C---A---TGT--T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2052999  9 + 191637585 A-AG-C---A---TGT--T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801877  9 +  11177569 A-AG-C---A---TGT--T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7516  9 -    135385 A-AA-G---C---TAT--T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387212  9 +   7955117 A-AG-G---A---TGT--T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2780  9 +     11955 A-AG-G---G---TGT--T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10386  9 -     16823 A-AG-G---A---TAT--T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240247  9 +   9596543 A-AG-G---G---ATT--T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72229  9 -     97402 A-AG-G---A---TAT--T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43621  9 +    110728 A-AG-C---A---TGT--T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63238  9 -     65777 A-AG-G---G---TAC--T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14759872  9 +  30322482 A-AG-G---G---TGT--T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4535  9 -     13097 A-AG-C---A---TGT--T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4289  9 +      5940 A-AG-C---A---TGT--T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4119  9 -      5717 A-AG-C---A---TGT--T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10491  9 -     11567 A-AG-C---A---TGT--T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11872  9 -     12945 A-AG-C---A---TGT--T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9386  9 +     29618 A-AG-G---A---TGT--T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9382  9 +     31569 A-AG-G---A---TGT--T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9392  9 +     24756 A-AG-G---A---TGT--T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9392  9 +     16388 A-AG-G---A---TGT--T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813869  9 -   3914936 A-AG-G---A---TAG--T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18236  9 +     24238 G-AG-G---G---TGT--T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341571  9 +    662738 A-AG-G---A---TAT--T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334536  9 -   1826925 A-AG-C---A---TGT--T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11730  9 +     19643 A-AA-T---G---TTC--T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045400  9 -   6120653 A-AA-T---G---TTC--T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39082068  3 +  43346337 A-AG---------------
i Loxodonta_africana.GL010049.1                          C 0 I 51
s Lycaon_pictus.CM007581.1                                41615031  9 +  59628241 A-AG-G---G---TAG--T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45931  9 -     61512 A-AG-C---A---TGT--T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373593  9 -  60120075 A-AG-C---A---TGT--T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25855  9 +     30207 A-AG-C---A---TGT--T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             693  9 -      5035 A-AG-C---A---TGT--T
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25808  9 +     30527 A-AG-C---A---TGT--T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36984  9 -     50087 A-AG-C---A---TGT--T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46728  9 +     51645 A-AG-C---A---TGT--T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415931  9 - 187317192 A-AG-C---A---TGT--T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400161  9 +  25927173 A-AG-C---A---TGT--T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49333  9 -     62418 A-AG-C---A---TGT--T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1870  9 +     14901 A-AG-C---A---TGT--T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45805  9 +     59329 A-AG-C---A---TGT--T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271713  9 +    668171 A-AG-C---A---TGT--T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   357  9 -      5049 A-AG-C---A---TGT--T
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3511  9 +     17132 A-AG-C---A---TGT--T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223588  9 -    270270 A-AG-G---G---CAA--A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323001  9 +  24302211 A-AG-C---A---TGT--T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357832  9 -    752769 A-AG-C---A---TGT--T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673919  9 -    737560 A-gg-g---g---tat--t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221215  9 +    317179 A-ag-g---g---tat--t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501431  9 +  40650429 A-AG-G---A---TGT--T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150763  9 +    207569 A-AG-G---G---TAT--T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26591  9 -     74585 A-AG-G---G---TAT--T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50523  9 -    140813 A-AG-T---G---TGT--T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429625  9 +  29670104 A-AG-G---G---TGT--T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87855  9 +     93471 A-AG-G---A---TAT--T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10658  9 +     17804 A-AG-C---A---TGT--T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11158  9 -     12984 A-AG-C---A---TGT--T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19474  9 -     26561 A-AG-C---A---TGT--T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985222  9 +  93316391 A-GG-A---A---TGT--C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46606  4 +    145209 C-TG-G-------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185451  9 +    200668 A-AG-G---G---TAC--T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962827  9 +  27267610 A-AC-G---G---TGT--T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363603  9 -   8254450 A-AG-G---G---TAC--T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42510  9 -     48117 A-AG-G---G---TAC--T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23035  9 -     27822 A-AG-C---A---TGT--T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8880  9 +     27589 A-AG-G---A---TAG--T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53005  9 -     62432 A-AG-A---G---TGT--C
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359960  9 +    437263 A-AG-G---A---TAT--T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179680  9 +    366855 G-AG-G---G---CAC--T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25922  9 -     82753 A-AC-A---G---TAT--T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18919  9 -     63510 A-AA-G---G---TAT--T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39580  9 +     47283 A-AG-G---G---TAA--T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593547  9 + 120012414 A-GG-G---G---TGT--T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687936  9 + 129401213 A-GG-G---G---TGT--T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497229 10 + 130317789 A-GGGG---G---TGT--T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83915  9 -     86153 A-AG-G---G---TAT--T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355515  9 +  14710649 A-AG-G---G---TAT--T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63489  9 +     67721 A-AG-A---G---TAT--G
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 1
s Myotis_davidii.KB100139.1                                4387999  9 +   6019432 A-AG-G---G---TAC--T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120164  9 +    130748 A-A--G---GG-C-AT--T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946675  4 +   3037898 -------------TAT--T
i Nannospalax_galili.KL204047.1                          I 3 C 0
s Nasalis_larvatus.k141_1350636                              29684  9 +     34575 A-AG-C---A---TGT--T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232638  9 -   7148211 A-AG-G---A---TAT--T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128648  9 -    149072 A-AG-C---A---TAT--T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54107  9 -    132029 A-AG-C---A---TGT--T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10202  9 -     16345 A-AG-C---A---TGT--T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16087  9 +     22201 A-AG-C---A---TGT--T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414308  9 -  22158432 A-AG-C---A---TGT--T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26485  9 -     54323 A-AG-C---A---TGT--T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198627  9 +   9404916 A-AG-G---G---TAG--T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638630  9 + 196305487 A-AA-T---G---TTC--T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1233  9 -      9413 A-AA-T---G---TTC--T
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566010  9 - 199412804 A-AA-T---G---TTC--T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557298  9 -   3988456 G-AA-C---A---TGT--T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055442  9 -  11899542 A-AG-A---G---TAT--T
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452086  9 +   2017862 A-AG-G---A---TAT--T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436690  9 -    630418 A-AC-A---A---TAT--T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14683  9 +    150152 A-AC-A---A---TAT--T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93184  9 -    140218 A-AG-G---G---TGT--T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4064  9 -     41509 A-AG-G---G---TGT--T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103028  9 +  10937097 A-AG-G---A---TAT--T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_1069005               445  4 -       505 t-tc-a-------------
i Orycteropus_afer.OryAfe_flattened_line_1069005         I 59 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104030  9 - 174332312 G-AG-G---G---TGT--T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39672  9 +    559221 A-AG-G---G---TAG--T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41175  9 -     51505 A-AA-T---G---TTA--T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354179  9 +   1103335 A-AA-T---G---TTA--T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404594  9 -  44047080 A-AC-A---A---TAT--T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5113  9 +     17875 A-AC-A---A---TAT--T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             12839 11 -     26668 A-AG-C---A---TGTTGT
i Pan_troglodytes.NBAG03003091.1                         I 27 I 174
s Panthera_onca.PanOnc_flattened_line_3271                   24898  8 -    230217 A--A-G---G---TAT--T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462224  8 -  18783137 A--A-G---G---TAT--T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972883  8 +   8748460 A--A-G---G---TAT--T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616122  9 +   2937107 A-AC-A---A---TAT--T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243833  9 - 183742232 A-AG-C---A---TGT--T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10295  9 +     21308 A-AG-C---A---TGT--T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292868  9 -  20919399 A-AG-C---A---TGT--T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22943  9 -     27687 A-AG-C---A---TGT--T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16089  9 +     16796 A-AG-C---A---TGT--T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22900  9 -     23640 A-AG-C---A---TGT--T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15495  9 +     78924 A-AG-T---G---TAC--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27511  9 +     31479 A-AA-T---G---CTC--T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            19880  9 -     24908 A-AA-C---G---CTC--T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2213  9 +      9367 A-AA-G---G---TGT--T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247261  9 +  18517816 A-AG-G---G---TGT--T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32356  9 -     56120 A-AG-G---G---TGT--T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4554  9 -     63832 A-AG-G---A---TAT--T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3119  9 +     55023 A-AG-C---A---CGT--T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2657  9 -     89929 A-AG-C---A---CGT--T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3247  9 +     40849 A-AG-C---A---CGT--T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254921  9 +  14605196 A-AG-C---A---TGT--T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4416  9 +     22231 A-AG-G---G---TAC--T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65243  9 +    207309 A-AG-C---A---TGT--T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6335  9 -     25401 A-AG-C---A---TGT--T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32079  9 +     58159 A-AG-C---A---TGT--T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32355  9 +     63561 A-AG-C---A---TGT--T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32115  9 +     51148 A-AG-C---A---TGT--T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557085  9 -   4542175 A-AG-C---A---TGT--T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32099  9 +     51125 A-AG-C---A---TGT--T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1552  9 +     19503 A-AG-G---A---TAT--T
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8510  9 +     39866 G-AG-C---A---TGT--T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3592  9 -      9282 G-AG-C---A---TGT--T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       42996  9 -     87950 G-AG-C---A---TGT--T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43392  9 -     88961 G-AG-C---A---TGT--T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8088  9 -     39403 G-AG-C---A---TGT--T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43039  9 +     87928 G-AG-C---A---TGT--T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8087  9 -     60166 G-AG-C---A---TGT--T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15024  9 -     67232 G-AG-C---A---TGT--T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42940  9 -     90634 G-AG-C---A---TGT--T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44407  9 +     89403 G-AG-C---A---TGT--T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178310  9 - 189387572 A-AG-C---A---TGT--T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193127  9 -   9816681 A-AG-C---A---TGT--T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28264  9 +     69807 A-AG-C---A---TGT--T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45445  9 -     80239 A-AG-C---A---TGT--T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 1261  8 +      7663 ---------GGTATTT--G
i Procavia_capensis.ProCapCap_scaffold_165387            I 3 I 44
s Prolemur_simus.MPIZ01000396.1                            1983020  9 +   4620579 A-AG-G---G---TGT--T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566531  9 -   2598838 A-AG-G---G---TGT--T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4169  9 -      7103 A-AG-G---G---TGT--T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4766  9 -     11706 A-AG-G---G---TGT--T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8504  9 -     30655 A-AG-G---G---TGT--T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34817  9 +     46564 A-AG-G---G---TGT--T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95096  9 -     98465 A-AG-G---G---TGT--T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8735  9 +     35169 A-AG-G---G---TGT--T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37867  9 +     52041 A-AG-T---G---TGT--T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52573  9 -     66298 A-AG-G---G---TAC--T
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5088  9 -     18639 A-AG-G---G---TAT--T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841161  9 -  28871421 A-Ag-g---g---tat--t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537676  9 -   4952924 A-Ag-g---g---tat--t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099541  8 +  38429054 A--A-G---G---TAT--T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27640  9 +     91421 A-AG-C---A---TGT--T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154124  9 -   7812017 A-AG-C---A---TGT--T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8497  9 +     72585 A-AG-C---A---TGT--T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53607  9 +     55069 A-AC-A---A---TAT--T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023152  9 -  90668790 G-GA-G---G---TGG--T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915141  9 +   3329780 A-AG-G---G---TAT--T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2218  9 +      7119 A-AG-C---A---TGT--T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122834  9 + 195417433 A-AG-C---A---TGT--T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237060  9 -   7961872 A-AG-C---A---TGT--T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75206  9 -    116970 A-AG-G---G---TAT--T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4399  9 +     27962 A-AG-C---A---TGT--T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4293  9 +      6077 A-AG-C---A---TGT--T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4383  9 +      5971 A-AG-C---A---TGT--T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4304  9 +      5932 A-AG-C---A---TGT--T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2646  9 -      4390 A-AG-C---A---TGT--T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392083  9 - 209938924 A-AG-C---A---TGT--T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4253  9 +      5979 A-AG-C---A---TGT--T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                822  9 -     22275 A-AG-C---A---TGT--T
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8282  9 +     16473 A-AC-A---A---TAT--T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109418  9 + 121099817 A-AG-C---A---TGT--T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30985  9 -     47369 A-AG-C---A---TGT--T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31371  9 -     79414 A-AG-C---A---TGT--T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28062  9 -     34454 A-AG-C---A---TGT--T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15463  9 -     22428 A-AG-C---A---TGT--T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30617  9 -     47109 A-AG-C---A---TGT--T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238663  9 +   5703754 A-AG-C---A---TGT--T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8253  9 +     21866 A-AG-C---A---TGT--T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116320 11 +    313613 A-AA-GGG-C---TAT--T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25959  9 +     27374 A-AG-C---A---TGT--T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29471  9 +     58920 A-AG-C---A---TGT--T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15969  9 -     45317 A-AG-C---A---TGT--T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23627  9 -     42441 A-AG-C---A---TGT--T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26305  9 -     29113 A-AG-C---A---TGT--T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29380  9 -     48123 A-AG-C---A---TGT--T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49639  9 +     77746 A-AG-G---G---TAT--T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864595 13 -   1910179 A-GA-GGGCGG--CAT--T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671719  1 +  18376816 ---T---------------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868791  9 +   3870691 A-AG-G---A---TGT--T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7172  9 -     97271 A-AG-G---G---TAT--T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125319  9 +    196729 A-AA-G---G---TAT--T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644188  9 +  69701581 A-AG-T---G---TAT--T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391567  9 +   1523678 A-AG-C---A---TGT--T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14738  9 +     22964 A-AG-G---T---TAC--T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3155  9 +      5583 A-A--G---GG-C-AT--T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192044  9 +    199430 A-AG-G---G---CAT--T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106014  9 -    539355 A-AG-G---G---CAT--T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1078  9 +      9917 A-AG-T---A---TGT--T
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7876  9 +     20590 A-AG-T---A---TGT--T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353819  9 - 186847797 A-AG-C---A---TGT--T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24515  9 -     33621 A-AG-G---G---CAT--T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20161  9 -     31044 C-T--G---GG-C-AT--T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480566  9 -    610378 A-AG-G---G---TCC--T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21504  9 +     26378 A-AG-C---A---TGT--T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34180  9 -     78344 A-AG-C---A---TGT--T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20829  9 +     25722 A-AG-C---A---TGT--T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29136  9 -     62838 A-AG-C---A---TGT--T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29180  9 +     46913 A-AG-C---A---TGT--T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9989  9 -     28527 A-AG-C---A---TGT--T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31071  9 -     64340 A-AG-C---A---TGT--T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29109  9 -     63452 A-AG-C---A---TGT--T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10556  9 +     22490 A-AG-C---A---TGT--T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3979  9 -      6147 A-AG-C---A---TGT--T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10892  9 -     13050 A-AG-C---A---TGT--T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256122  9 -   6242583 A-AG-C---A---TGT--T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2150  9 +     19340 A-AG-C---A---TGT--T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173897  9 -    200418 A-GG-G---A---TCT--T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480889  8 -  10818551 ---------GGTGTTT--G
i Trichechus_manatus.JH594705.1                          I 3 I 44
s Tupaia_chinensis.KB320699.1                              1834821  7 -   4065304 A-AG-G---G---TG----
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8838  7 -     70247 A-AG-G---G---TA----
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366141  9 -  33153633 A-AG-G---A---TAT--T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4047 11 -     21056 A-AA-GG-AA---TAT--T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182258  9 +   5085361 A-AG-T---G---TAT--T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25672  9 -     30710 A-AG-G---G---TGT--T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24579  9 -    147434 A-AG-G---G---TGT--T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76727  9 +   5488506 A-AG-G---G---TAT--A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105393  9 -    112863 A-AG-G---G---TAG--T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174586  9 -    224448 A-AG-G---G---TGT--T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29294  9 -     86975 A-AG-G---A---TAT--T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       416  9 -      1899 A-AG-G---A---TAT--T
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1430  9 +      2126 A-AG-G---A---TAT--T
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Myotis_myotis.MyoMyo_scaffold_66571                         2619  3 +     18357 I
e Myotis_lucifugus.GL429869.1                               383810  3 +   4330536 I
e Myotis_brandtii.KE162005.1                               9793851  3 +  10118263 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5866  7 +     36723 T----GATC-------------------------------TT
s Acinonyx_jubatus.LLWD01001279.1                           813291  7 +   1699592 C----CATT-------------------------------CT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25538  7 +     63021 T----GATT-------------------------------CT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415753  7 +  29979442 T----CACA-------------------------------CT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216089  7 +    347723 T----CACA-------------------------------CT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18504  7 -     61208 T----GACT-------------------------------CT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 2
s Allenopithecus_nigroviridis.k141_3755588                   48504  7 +     53615 T----GATC-------------------------------TT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           535  7 +     13857 T----GATC-------------------------------TT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17086  7 -     21945 T----GATC-------------------------------TT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18771  7 +     32033 T----GATC-------------------------------TT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72614  7 -     84148 T----GACC-------------------------------TT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44853  7 -     78289 T----GACC-------------------------------TT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44292  7 +     55831 T----GACC-------------------------------TT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42742  7 -     64179 T----GACC-------------------------------TT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24376  7 -     24835 T----GACC-------------------------------TT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41367  7 +     45454 T----GACC-------------------------------TT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47016  7 +     70886 T----GACC-------------------------------TT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9189  7 +     30854 T----GACC-------------------------------TT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33323  7 +     42133 T----GACC-------------------------------TT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585736  7 +   2318259 T----CACT-------------------------------CT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177538  7 -    412891 T----CGCT-------------------------------CT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50843  7 -     68529 T----CACT-------------------------------CT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1580  7 +     17741 T----GACC-------------------------------TT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2205  7 -     15923 T----GACC-------------------------------TT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672487  7 +   5030052 T----GACC-------------------------------TT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2481  7 -     16391 T----GACC-------------------------------TT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2040  7 -     17186 T----GACC-------------------------------TT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16549  7 -     32367 T----GACT-------------------------------CT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20675  7 -     45910 T----GACT-------------------------------CT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5804  7 -     15198 T----CACT-------------------------------CT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275077  7 +  21539123 T----GACC-------------------------------TT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11245  7 +     48076 T----GACC-------------------------------TT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6380  7 -     28759 T----GACC-------------------------------TT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33934  7 +     44353 T----GACC-------------------------------TT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49305  7 -     71267 T----GACC-------------------------------TT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23363  7 -     33135 T----GACC-------------------------------TT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6645  7 +     11645 T----GATG-------------------------------CT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6653  7 -     19611 T----GATG-------------------------------CT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963886  7 -  23207421 T----CACT-------------------------------CT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          386  7 -     25979 T----CACT-------------------------------CT
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86744  7 +    124022 T----CACT-------------------------------CT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22278  7 +    288883 T----CACT-------------------------------CT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356670  7 +  48749331 T----CACT-------------------------------CT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755234  7 +   1948126 T----CACT-------------------------------CT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545376  7 -  45695690 T----CACT-------------------------------CT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530397  7 -   4408762 T----CACT-------------------------------CT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8254  7 +     28062 T----GACC-------------------------------TT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43548  7 -     91139 T----GACC-------------------------------TT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21074  7 +     95584 T----GACC-------------------------------TT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20987  7 +    119600 T----GACC-------------------------------TT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10560  7 +     18648 T----GACC-------------------------------TT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10095  7 -     13885 T----GACC-------------------------------TT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2165  7 -      8861 T----GACC-------------------------------TT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454557  7 + 189096842 T----GACC-------------------------------TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2080  7 +      8664 T----GACC-------------------------------TT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631402  7 +  17673402 T----CACT-------------------------------TT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665688  7 +   7040546 T----CACT-------------------------------TT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209348  7 +   1652518 T----CACT-------------------------------TT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505771  7 +  60362399 T----CATG-------------------------------CT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9407  7 -     23171 T----CATG-------------------------------CT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222750  7 +   9314153 T----CATG-------------------------------CT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615885  7 +  59632846 T----CATG-------------------------------CT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107466  7 -  63665305 T----CATG-------------------------------CT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409465  7 -  46296322 T----CACT-------------------------------CT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591739  7 +  44709034 T----CACT-------------------------------CT
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270854  7 +    496798 t----aact-------------------------------tt
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                660  7 +      9923 T----CCCT-------------------------------CT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28056  7 -     39886 T----GACT-------------------------------CT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79940  7 -    217609 T----CACT-------------------------------CT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996803  7 +  23392119 T----GATT-------------------------------CT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000244  7 +  23407841 T----GATT-------------------------------CT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63325  7 -     66877 T----GATT-------------------------------CT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5478  7 -     12580 T----GACC-------------------------------TT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43536  7 +     53515 T----GACC-------------------------------TT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373298  7 -  26074798 T----GACC-------------------------------TT
i Cebus_albifrons.Contig27                               I 1834 C 0
s Cebus_olivaceus.k141_1404781                                8352  7 -     34880 T----GACC-------------------------------TT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67448  7 -     89041 T----GACC-------------------------------TT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2814  7 -      5494 T----AACT-------------------------------TT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492574  7 -  27778364 T----CACT-------------------------------CT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19407  7 +     27315 T----CACT-------------------------------CT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141660  7 -   4669795 T----GATC-------------------------------TT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45403  7 +     47900 T----GATC-------------------------------TT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            832  7 -     14410 T----GATC-------------------------------TT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45216  7 -    148725 T----GATC-------------------------------TT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27418  7 -     40656 T----GATC-------------------------------TT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7382  7 +     20796 T----GATC-------------------------------TT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12500  7 -     17524 T----GATC-------------------------------TT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28227  7 -     34525 T----GATC-------------------------------TT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12003  7 -     25376 T----GATC-------------------------------TT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364597  7 -  39242232 T----GATC-------------------------------TT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270317  7 +  21565898 T----GATC-------------------------------TT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32685  7 -     45857 T----GATC-------------------------------TT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27586  7 -     32606 T----GATC-------------------------------TT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3748  7 +      8499 T----GATC-------------------------------TT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26144  7 +     70610 T----GATC-------------------------------TT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23112  7 +     36323 T----GATC-------------------------------TT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13078  7 -     19938 T----GACT-------------------------------CT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31018  7 -     33796 T----GATG-------------------------------CT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5535  7 -     15404 T----AATG-------------------------------CT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9354  7 -     32913 T----GACC-------------------------------TT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19767  7 -     40346 T----GACC-------------------------------TT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20022  7 +    216457 T----GACC-------------------------------TT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19815  7 +     39636 T----GACC-------------------------------TT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239159  7 -   2543920 t----gatt-------------------------------ct
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4410  7 +      5346 T----GACC-------------------------------TT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42885  7 -    112038 T----GACC-------------------------------TT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8456  7 +     34062 T----GACC-------------------------------TT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344006  7 +  18827391 T----GATC-------------------------------TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10554  7 -     44032 T----GATC-------------------------------TT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305331  7 - 135778131 T----GATC-------------------------------TT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15205  7 +     15858 T----GACT-------------------------------CT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606780  7 -    839153 T----GACT-------------------------------CT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1241 10 +      2406 T-TCTGACT-------------------------------CC
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409736  7 -   2368649 T----GATC-------------------------------TT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379617  7 - 200372422 T----GATC-------------------------------TT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3174  7 -     84244 T----GATC-------------------------------TT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807637  7 +  53390261 T----TACA-------------------------------CG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3167  7 -      8242 G----CACT-------------------------------CT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44674  7 -     83289 T----GACG-------------------------------TT
i Cricetomys_gambianus.CriGam_scaffold_14425             I 1 C 0
s Cricetulus_griseus.LT883664.1                          213115250  7 - 224834208 T----GACT-------------------------------GT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9782  4 +     12657 -------CT-------------------------------AC
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4744  7 +     87169 T----CATT-------------------------------CT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645373  7 -   1526836 T----GACC-------------------------------TT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18713  6 +     50838 T----GAT--------------------------------TT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4720  7 +     36344 T----GACT-------------------------------CT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28496  7 +     75252 T----GATT-------------------------------CT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110430  7 -   2246927 T----GACT-------------------------------CT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292954  7 +  12879189 T----GATT-------------------------------CT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632294  7 -  35494412 T----CACT-------------------------------CT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330855  7 -   2620052 T----CACT-------------------------------CT
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664858  7 -   1390856 T----CACT-------------------------------CT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139651  7 -    198055 T----CACT-------------------------------CT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99247  7 -    115145 G----GATT-------------------------------CT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950869  7 -  37912305 T----GACT-------------------------------TT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5794  7 -     10735 T----GACT-------------------------------CT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62855353 10 - 111700974 t-tctgact-------------------------------ca
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6630  7 +     19438 t----catt-------------------------------ct
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240106  7 -    607251 T----CACT-------------------------------CT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9109270 11 -  10337057 TATTTAACT-------------------------------CT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31396  7 +    110024 T----GACT-------------------------------TT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13367  7 +     18970 T----GACT-------------------------------TT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916502  7 +  41312741 T----CATG-------------------------------CT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579276  7 +  14770903 T----CACT-------------------------------CT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041735  7 -   4378816 T----CACT-------------------------------GT
i Equus_asinus.JREZ01000139.1                            C 0 I 37
s Equus_caballus.CM000403.2                               21375673  7 +  39960074 T----CACT-------------------------------GT
i Equus_caballus.CM000403.2                              C 0 I 37
s Equus_przewalskii.ATBW01110277.1                            1054  7 -      1194 T----CACT-------------------------------GT
i Equus_przewalskii.ATBW01110277.1                       C 0 I 37
s Erinaceus_europaeus.JH835339.1                           3666438  4 +   7059049 -------GT-------------------------------AT
i Erinaceus_europaeus.JH835339.1                         I 3 C 0
s Erythrocebus_patas.Contig38                               263544  7 +  21539334 T----GATC-------------------------------TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71503  7 -    133382 T----CACT-------------------------------CT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202             1047  7 -      1170 T----CACT-------------------------------CT
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               15163  7 -     24895 T----GATG-------------------------------CT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42873  7 -     70999 T----GATG-------------------------------CT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86843  7 +    112731 T----GATG-------------------------------CT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43406  7 +     68309 T----GATG-------------------------------CT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53730  7 -     65740 T----GATG-------------------------------CT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24362  7 -     75513 T----GATG-------------------------------CT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48557  7 -     97555 T----GATG-------------------------------CT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5281  7 +     30972 T----GATG-------------------------------CT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43001  7 -     52037 T----GATG-------------------------------CT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59404  7 -    111500 T----GATG-------------------------------CT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247200  7 - 206538554 C----TATT-------------------------------CT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185116986  7 - 205367284 C----TATT-------------------------------CT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28083  7 -     30238 C----TATT-------------------------------CT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916800  7 -   3816255 T----GGTT-------------------------------CT
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126038  7 -    137831 T----GACT-------------------------------AT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9583  7 +     22493 T----GACT-------------------------------AT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21654  7 -     32986 T----GACT-------------------------------CT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1546  7 -     28519 T----GATT-------------------------------CT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91809  7 -     95226 T----CACT-------------------------------CT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34869  7 -     36801 T----GACA-------------------------------TT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6166  7 -      8343 T----GATC-------------------------------TT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255181  7 - 186649187 T----GATC-------------------------------TT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2368  7 -     78134 T----GACT-------------------------------CA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15088  7 -     40692 T----GATG-------------------------------CT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36490  7 +     49394 T----GATG-------------------------------CT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61358  7 -     66874 T----GATG-------------------------------CT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10232  7 -     42923 T----GATG-------------------------------CT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17231  7 -     53142 T----GATG-------------------------------CT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31177  7 -    327341 T----AATT-------------------------------CT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9483  7 +     48891 T----CACT-------------------------------CT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932777  7 -  22651954 T----GATT-------------------------------CT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                1488 20 +      4291 t-tctgacc-----------cat-g---t--gga-ta---cc
i Heterohyrax_brucei.HetBruBak_scaffold_154059           I 44 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                7994  7 -     36432 T----CACT-------------------------------CT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551988  7 -   1711038 T----CACT-------------------------------CT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1426  7 -      2730 T----CACA-------------------------------CT
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143190  7 -    630532 T----GATC-------------------------------TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70341  7 +     83186 T----CATT-------------------------------CT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72240  7 +    143317 T----GATT-------------------------------CT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6224  7 +     12352 T----GATC-------------------------------TT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13408  7 +     55766 T----GATC-------------------------------TT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053008  7 + 191637585 T----GATC-------------------------------TT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801886  7 +  11177569 T----GATC-------------------------------TT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7525  7 -    135385 T----GGTT-------------------------------CT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387221  7 +   7955117 T----GACT-------------------------------CT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2789  7 +     11955 C----GATG-------------------------------CT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10395  7 -     16823 T----CACT-------------------------------CT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240256  6 +   9596543 G----AGCC-------------------------------C-
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72238  7 -     97402 T----CACT-------------------------------CA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43630  7 +    110728 T----GACC-------------------------------TT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63247  7 -     65777 T----TGCT-------------------------------CT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14759881  7 +  30322482 T----GATG-------------------------------CT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4544  7 -     13097 T----GACC-------------------------------TT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4298  7 +      5940 T----GACC-------------------------------TT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4128  7 -      5717 T----GACC-------------------------------TT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10500  7 -     11567 T----GACC-------------------------------TT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11881  7 -     12945 T----GACC-------------------------------TT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9395  7 +     29618 T----GATG-------------------------------CT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9391  7 +     31569 T----GATG-------------------------------CT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9401  7 +     24756 T----GATG-------------------------------CT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9401  7 +     16388 T----GATG-------------------------------CT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813878  7 -   3914936 T----GATG-------------------------------TT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18245  7 +     24238 T----GATT-------------------------------CT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341580  7 +    662738 T----CACT-------------------------------CT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334545  7 -   1826925 T----GATC-------------------------------TT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11739  7 +     19643 T----GACT-------------------------------CT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045409  7 -   6120653 T----GACT-------------------------------CT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39082122 19 +  43346337 t-tctgact-----------cat-g---t-----g-acc-tc
i Loxodonta_africana.GL010049.1                          I 51 C 0
s Lycaon_pictus.CM007581.1                                41615040  7 +  59628241 T----CATG-------------------------------CT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              45940  7 -     61512 T----GATC-------------------------------TT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373602  7 -  60120075 T----GATC-------------------------------TT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25864  7 +     30207 T----GATC-------------------------------TT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             702  7 -      5035 T----GATC-------------------------------TT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25817  7 +     30527 T----GATC-------------------------------TT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 36993  7 -     50087 T----GATC-------------------------------TT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46737  7 +     51645 T----GATC-------------------------------TT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415940  7 - 187317192 T----GATC-------------------------------TT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400170  7 +  25927173 T----GATC-------------------------------TT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49342  7 -     62418 T----GATC-------------------------------TT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1879  7 +     14901 T----GATC-------------------------------TT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45814  7 +     59329 T----GATC-------------------------------TT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271722  7 +    668171 T----GATC-------------------------------TT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   366  7 -      5049 T----GATC-------------------------------TT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3520  7 +     17132 T----GATC-------------------------------TT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223597  7 -    270270 T----CATT-------------------------------CT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323010  7 +  24302211 T----GATC-------------------------------TT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357841  7 -    752769 T----GATC-------------------------------TT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673928  7 -    737560 t----catt-------------------------------ct
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221224  7 +    317179 t----catt-------------------------------ct
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501440  7 +  40650429 T----GACT-------------------------------CT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150772  7 +    207569 G----CACT-------------------------------CT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26600  7 -     74585 T----CACG-------------------------------CT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50532  7 -    140813 T----GATT-------------------------------CT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429634  7 +  29670104 T----AACT-------------------------------GT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87864  7 +     93471 T----CACT-------------------------------CT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10667  7 +     17804 T----GACC-------------------------------TT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11167  7 -     12984 T----GACC-------------------------------TT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19483  7 -     26561 T----GACC-------------------------------TT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985231  7 +  93316391 T----GATG-------------------------------CT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46610 10 +    145209 T-TCTGATT-------------------------------GA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185460  7 +    200668 T----CACC-------------------------------CT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962836  7 +  27267610 T----GACT-------------------------------CT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363612  7 -   8254450 T----CACT-------------------------------CT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42519  7 -     48117 T----CACT-------------------------------CT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23044  7 -     27822 T----GATC-------------------------------TT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8889  7 +     27589 T----CATG-------------------------------TT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53014  7 -     62432 T----GATG-------------------------------CT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359969  7 +    437263 T----CACT-------------------------------CT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179689  7 +    366855 T----CACT-------------------------------CT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25931  7 -     82753 T----CACT-------------------------------CT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18928  7 -     63510 T----CATT-------------------------------CT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39589  7 +     47283 T----CACT-------------------------------CT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593556  7 + 120012414 T----GATT-------------------------------GT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687945  7 + 129401213 T----GATT-------------------------------CT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497239  7 + 130317789 T----GATT-------------------------------CT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83924  7 -     86153 T----AACT-------------------------------CT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355524  7 +  14710649 T----CATG-------------------------------CT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63499  2 +     67721 ----------------------------------------TT
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 1 C 0
s Myotis_davidii.KB100139.1                                4388008  7 +   6019432 T----CATT-------------------------------CT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120173  7 +    130748 T----GACT-------------------------------CC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946679 35 +   3037898 T----GGA-TAAAAGTACAATTtagaaattctcagtaaa-g-
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_1350636                              29693  7 +     34575 T----GATC-------------------------------TT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232647  7 -   7148211 T----CACT-------------------------------CT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128657  7 -    149072 T----CACT-------------------------------CT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54116  7 -    132029 T----GATC-------------------------------TT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10211  7 -     16345 T----GATC-------------------------------TT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16096  7 +     22201 T----GATC-------------------------------TT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414317  7 -  22158432 T----GATC-------------------------------TT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26494  7 -     54323 T----GATC-------------------------------TT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198636  7 +   9404916 T----CATG-------------------------------CT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638639  7 + 196305487 T----GACT-------------------------------CT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1242  7 -      9413 T----GACT-------------------------------CT
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566019  7 - 199412804 G----GACT-------------------------------CT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557307  7 -   3988456 T----GTCT-------------------------------CT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055451  6 -  11899542 T----GAT--------------------------------CT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452095  7 +   2017862 T----CACG-------------------------------TT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436699  7 -    630418 T----CACT-------------------------------CT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14692  7 +    150152 T----CACT-------------------------------CT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93193  7 -    140218 G----GACT-------------------------------TT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4073  7 -     41509 C----GACT-------------------------------CT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103037  7 +  10937097 T----CACT-------------------------------CT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_1069005               449 10 -       505 t-ggtgacc-------------------------------cc
i Orycteropus_afer.OryAfe_flattened_line_1069005         C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104039  7 - 174332312 T----GACT-------------------------------CC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39681  7 +    559221 T----CATG-------------------------------CT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41184  7 -     51505 G----GACT-------------------------------CT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354188  7 +   1103335 G----GACT-------------------------------CT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404603  7 -  44047080 T----CACT-------------------------------CT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5122  7 +     17875 T----CACT-------------------------------CT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473210  7 - 189151597 T----GATC-------------------------------TT
i Pan_troglodytes.CM009242.2                             I 9 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24906  7 -    230217 C----CATT-------------------------------CT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462232  7 -  18783137 C----CATT-------------------------------CT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972891  7 +   8748460 C----CATT-------------------------------CT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616131  7 +   2937107 T----CACT-------------------------------CT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243842  7 - 183742232 T----GATC-------------------------------TT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10304  7 +     21308 T----GATC-------------------------------TT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292877  7 -  20919399 T----GATC-------------------------------TT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22952  7 -     27687 T----GATC-------------------------------TT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16098  7 +     16796 T----GATC-------------------------------TT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22909  7 -     23640 T----GATC-------------------------------TT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15504  7 +     78924 T----CATT-------------------------------CT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27520  7 +     31479 T----GATT-------------------------------CT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            19889  7 -     24908 T----GATT-------------------------------CT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2222  7 +      9367 T----GACT-------------------------------AT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247270  7 +  18517816 T----GACT-------------------------------CT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32365  7 -     56120 T----GATT-------------------------------CT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4563  7 -     63832 T----CACT-------------------------------CT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3128  7 +     55023 T----GATC-------------------------------TT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2666  7 -     89929 T----GATC-------------------------------TT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3256  7 +     40849 T----GATC-------------------------------TT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254930  7 +  14605196 T----GATC-------------------------------TT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4425  7 +     22231 T----CACT-------------------------------CT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65252  7 +    207309 T----GACC-------------------------------TT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6344  7 -     25401 T----GGCC-------------------------------TT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32088  7 +     58159 T----GACC-------------------------------TT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32364  7 +     63561 T----GACC-------------------------------TT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32124  7 +     51148 T----GACC-------------------------------TT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557094  7 -   4542175 T----GGCC-------------------------------TT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32108  7 +     51125 T----GACC-------------------------------TT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1561  7 +     19503 T----CACT-------------------------------CT
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8519  7 +     39866 T----GACC-------------------------------TC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3601  7 -      9282 T----GACT-------------------------------TC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43005  7 -     87950 T----GACT-------------------------------TC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43401  7 -     88961 T----GACC-------------------------------TC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8097  7 -     39403 T----GACT-------------------------------TC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43048  7 +     87928 T----GACT-------------------------------TC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8096  7 -     60166 T----GACC-------------------------------TC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15033  7 -     67232 T----GACC-------------------------------TC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42949  7 -     90634 T----GACC-------------------------------TC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44416  7 +     89403 T----GACC-------------------------------TC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178319  7 - 189387572 T----GATC-------------------------------AT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193136  7 -   9816681 T----GATC-------------------------------AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28273  7 +     69807 T----GATC-------------------------------TT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45454  7 -     80239 T----GATC-------------------------------TT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 1313 20 +      7663 T-TCTGACC--CGTGTGGA-T-----------------A-CC
i Procavia_capensis.ProCapCap_scaffold_165387            I 44 C 0
s Prolemur_simus.MPIZ01000396.1                            1983029  7 +   4620579 T----GATG-------------------------------CT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566540  7 -   2598838 C----GATG-------------------------------CT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4178  7 -      7103 C----GATG-------------------------------CT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4775  7 -     11706 C----GATG-------------------------------CT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8513  7 -     30655 C----GATG-------------------------------CT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34826  7 +     46564 C----GATG-------------------------------CT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95105  7 -     98465 C----GATG-------------------------------CT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8744  7 +     35169 C----GATG-------------------------------CT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37876  7 +     52041 T----GATT-------------------------------CT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52582  7 -     66298 T----CACT-------------------------------CT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5097  7 -     18639 T----CATG-------------------------------CT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841170  7 -  28871421 t----catt-------------------------------ct
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537685  7 -   4952924 t----catt-------------------------------ct
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099549  7 +  38429054 C----CATT-------------------------------CT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27649  7 +     91421 T----GATC-------------------------------TT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154133  7 -   7812017 T----GATC-------------------------------TT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8506  7 +     72585 T----GATC-------------------------------TT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53616  7 +     55069 T----CACT-------------------------------CT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023161  7 -  90668790 T----GATT-------------------------------CT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915150  7 +   3329780 T----CACC-------------------------------TT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2227  7 +      7119 T----GATC-------------------------------TT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122843  7 + 195417433 T----GATC-------------------------------TT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237069  7 -   7961872 T----GATC-------------------------------TT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75215  7 -    116970 T----CATT-------------------------------CT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4408  7 +     27962 T----GACC-------------------------------TT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4302  7 +      6077 T----GACC-------------------------------TT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4392  7 +      5971 T----GACC-------------------------------TT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4313  7 +      5932 T----GACC-------------------------------TT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2655  7 -      4390 T----GACC-------------------------------TT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392092  7 - 209938924 T----GACC-------------------------------TT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4262  7 +      5979 T----GACC-------------------------------TT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                831  7 -     22275 T----GACC-------------------------------TT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8291  7 +     16473 T----CACT-------------------------------CT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109427  7 + 121099817 T----GACC-------------------------------TT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       30994  7 -     47369 T----GACC-------------------------------TT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31380  7 -     79414 T----GACC-------------------------------TT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28071  7 -     34454 T----GACC-------------------------------TT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15472  7 -     22428 T----GACC-------------------------------TT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30626  7 -     47109 T----GACC-------------------------------TT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238672  7 +   5703754 T----GACC-------------------------------TT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8262  7 +     21866 T----GACC-------------------------------TT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116331  7 +    313613 T----TACT-------------------------------CT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25968  7 +     27374 T----GATC-------------------------------TT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29480  7 +     58920 T----GATC-------------------------------TT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15978  7 -     45317 T----GATC-------------------------------TT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23636  7 -     42441 T----GATC-------------------------------TT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26314  7 -     29113 T----GATC-------------------------------TT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29389  7 -     48123 T----GATC-------------------------------TT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49648  7 +     77746 T----GACA-------------------------------CT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864608  7 -   1910179 T----TACT-------------------------------TT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671720  4 +  18376816 -------CT-------------------------------AC
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868800  7 +   3870691 T----GACT-------------------------------CT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7181  7 -     97271 T----CATG-------------------------------CT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125328  7 +    196729 T----CATT-------------------------------CT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644197  7 +  69701581 T----CACT-------------------------------CT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391576  7 +   1523678 T----GATC-------------------------------TT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14747  7 +     22964 T----CTCT-------------------------------CT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3164  7 +      5583 T----GACT-------------------------------CC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192053  7 +    199430 T----CACT-------------------------------CT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106023  7 -    539355 T----CACT-------------------------------CT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1087  7 +      9917 T----AACT-------------------------------TT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7885  7 +     20590 T----AACT-------------------------------TT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353828  7 - 186847797 T----GATC-------------------------------TT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24524  7 -     33621 T----GCTT-------------------------------CT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20170  7 -     31044 T----GACT-------------------------------TT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480575  7 -    610378 T----CACT-------------------------------CT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21513  7 +     26378 T----GATC-------------------------------TT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34189  7 -     78344 T----GATC-------------------------------TT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20838  7 +     25722 T----GATC-------------------------------TT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29145  7 -     62838 T----GATC-------------------------------TT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29189  7 +     46913 T----GATC-------------------------------TT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                          9998  7 -     28527 T----GATC-------------------------------TT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31080  7 -     64340 T----GATC-------------------------------TT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29118  7 -     63452 T----GATC-------------------------------TT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10565  7 +     22490 T----GATC-------------------------------TT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3988  7 -      6147 T----GATC-------------------------------TT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10901  7 -     13050 T----GATC-------------------------------TT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256131  7 -   6242583 T----GATC-------------------------------TT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2159  7 +     19340 T----GATC-------------------------------TT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173906  6 -    200418 T----CACT-------------------------------C-
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480941 20 -  10818551 t-tctgact--------------cg-----c--ggTGCCCCC
i Trichechus_manatus.JH594705.1                          I 44 C 0
s Tupaia_chinensis.KB320699.1                              1834828  7 -   4065304 T----GACT-------------------------------CT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8845  7 -     70247 T----GACT-------------------------------CT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366150  7 -  33153633 T----CACT-------------------------------CT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4058  7 -     21056 T----TACT-------------------------------CT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182267  7 +   5085361 T----CACA-------------------------------CT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25681  7 -     30710 T----GATA-------------------------------CT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24588  7 -    147434 T----GATA-------------------------------CT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76736  7 +   5488506 T----CACT-------------------------------TT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105402  7 -    112863 T----CATG-------------------------------CT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174595  7 -    224448 T----GACT-------------------------------TT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732         29303  7 -     86975 T----CATG-------------------------------TT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       425  7 -      1899 C----AGCT-------------------------------CT
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1439  7 +      2126 T----CACT-------------------------------CT
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Myotis_myotis.MyoMyo_scaffold_66571                         2619  3 +     18357 I
e Myotis_lucifugus.GL429869.1                               383810  3 +   4330536 I
e Myotis_brandtii.KE162005.1                               9793851  3 +  10118263 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5873 2 +     36723 C--------T
s Acinonyx_jubatus.LLWD01001279.1                           813298 2 +   1699592 T--------T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 41
s Acomys_cahirinus.AcoCah_scaffold_21377                     25545 2 +     63021 T--------T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415760 2 +  29979442 T--------T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 46
s Ailurus_fulgens.LNAC01001112.1                            216096 3 +    347723 T------T-T
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 41
s Allenopithecus_nigroviridis.k141_3755588                   48511 2 +     53615 C--------T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           542 2 +     13857 C--------T
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17093 2 -     21945 C--------T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18778 2 +     32033 C--------T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72621 2 -     84148 T--------T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44860 2 -     78289 T--------T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44299 2 +     55831 T--------T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42749 2 -     64179 T--------T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24383 2 -     24835 T--------T
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41374 2 +     45454 T--------T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47023 2 +     70886 T--------T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9196 2 +     30854 T--------T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33330 2 +     42133 T--------T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585743 2 +   2318259 T--------T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177545 2 -    412891 T--------T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50850 2 -     68529 T--------T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1587 2 +     17741 T--------T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2212 2 -     15923 T--------T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672494 2 +   5030052 T--------T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2488 2 -     16391 T--------T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2047 2 -     17186 T--------T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16556 2 -     32367 T--------T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20682 2 -     45910 T--------T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5811 2 -     15198 T--------T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275084 2 +  21539123 T--------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11252 2 +     48076 T--------T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6387 2 -     28759 T--------T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33941 2 +     44353 T--------T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49312 2 -     71267 T--------T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23370 2 -     33135 T--------T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6652 2 +     11645 T--------T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6660 2 -     19611 T--------T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963893 2 -  23207421 C--------T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          393 2 -     25979 T--------T
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86751 2 +    124022 T--------T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22285 2 +    288883 T--------T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356677 2 +  48749331 T--------T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755241 2 +   1948126 T--------T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545383 2 -  45695690 T--------T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530404 2 -   4408762 T--------T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8261 2 +     28062 T--------T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43555 2 -     91139 T--------T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21081 2 +     95584 T--------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20994 2 +    119600 T--------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10567 2 +     18648 T--------T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10102 2 -     13885 T--------T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2172 2 -      8861 T--------T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454564 2 + 189096842 T--------T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2087 2 +      8664 T--------T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631409 2 +  17673402 T--------T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665695 2 +   7040546 T--------T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209355 2 +   1652518 T--------T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505778 2 +  60362399 T--------T
i CanFam4.chr16                                          C 0 I 41
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9414 2 -     23171 T--------T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 41
s Canis_lupus_dingo.QKWQ01000480.1                          222757 2 +   9314153 T--------T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 41
s Canis_lupus_familiaris.chr16                            41615892 2 +  59632846 T--------T
i Canis_lupus_familiaris.chr16                           C 0 I 41
s Canis_lupus_orion.HG994398.1                            45107473 2 -  63665305 T--------T
i Canis_lupus_orion.HG994398.1                           C 0 I 41
s Capra_aegagrus.CM003241.1                               27409472 2 -  46296322 T--------T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591746 2 +  44709034 T--------T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270861 2 +    496798 t--------t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                667 2 +      9923 T--------T
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28063 2 -     39886 T--------T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     79947 2 -    217609 T--------T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996810 2 +  23392119 T--------T
i Cavia_aperea.AVPZ01000300.1                            C 0 I 33
s Cavia_porcellus.DS562891.1                               5000251 2 +  23407841 T--------T
i Cavia_porcellus.DS562891.1                             C 0 I 33
s Cavia_tschudii.CavTsc_scaffold_23560                       63332 2 -     66877 T--------T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 33
s Cebuella_niveiventris.k141_592277                           5485 2 -     12580 T--------T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43543 2 +     53515 T--------T
i Cebuella_pygmaea.k141_145798                           C 0 I 33
s Cebus_albifrons.Contig27                                  373305 2 -  26074798 T--------T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8359 2 -     34880 T--------T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67455 2 -     89041 T--------T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2821 2 -      5494 T--------T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492581 2 -  27778364 T--------T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19414 2 +     27315 T--------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141667 2 -   4669795 C--------T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45410 2 +     47900 C--------T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            839 2 -     14410 C--------T
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45223 2 -    148725 C--------T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27425 2 -     40656 C--------T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7389 2 +     20796 C--------T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12507 2 -     17524 C--------T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28234 2 -     34525 C--------T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12010 2 -     25376 C--------T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364604 2 -  39242232 C--------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270324 2 +  21565898 C--------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32692 2 -     45857 C--------T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27593 2 -     32606 C--------T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3755 2 +      8499 C--------T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26151 2 +     70610 C--------T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23119 2 +     36323 C--------T
i Cercopithecus_roloway.k141_3012935                     C 0 I 1
s Cheirogaleus_major.k141_666340                             31025 2 -     33796 T--------T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5542 2 -     15404 T--------T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9361 2 -     32913 T--------T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19774 2 -     40346 T--------T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20029 2 +    216457 T--------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19822 2 +     39636 T--------T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239166 2 -   2543920 t--------t
i Chinchilla_lanigera.JH722012.1                         C 0 I 29
s Chiropotes_albinasus.k141_1946120                           4417 2 +      5346 T--------T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42892 2 -    112038 T--------T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8463 2 +     34062 T--------T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344013 2 +  18827391 C--------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10561 2 -     44032 C--------T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 I 35
s Chlorocebus_sabaeus.CM001947.1                            305338 2 - 135778131 C--------T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15212 2 +     15858 T--------T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606787 2 -    839153 T--------T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1251 2 +      2406 A--------T
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 I 17
s Colobus_angolensis.KN981557.1                             409743 2 -   2368649 C--------T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379624 2 - 200372422 C--------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3181 2 -     84244 C--------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807644 2 +  53390261 T--------T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3174 2 -      8242 T--------T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44681 2 -     83289 T--------T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115257 2 - 224834208 T--------T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9786 2 +     12657 T--------T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4751 2 +     87169 T--------T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 41
s Ctenodactylus_gundi.CteGun_scaffold_65                    645380 2 -   1526836 T--------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18719 2 +     50838 T--------T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4727 2 +     36344 T--------T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 33
s Dasyprocta_punctata.DasPun_flattened_line_15900            28503 2 +     75252 T--------T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 33
s Dasypus_novemcinctus.JH564415.1                          2110437 2 -   2246927 C--------T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292961 2 +  12879189 T--------T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632301 2 -  35494412 T--------T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330862 2 -   2620052 T--------T
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664865 2 -   1390856 T--------T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139658 2 -    198055 T--------T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99254 2 -    115145 T--------T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 29
s Dipodomys_ordii.KN672350.1                              18950876 2 -  37912305 T--------T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5801 2 -     10735 T--------T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62855363 9 - 111700974 gggggagC-T
i Echinops_telfairi.JH980293.1                           C 0 I 58
s Eidolon_helvum.AWHC01266696.1                               6637 2 +     19438 t--------t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240113 2 -    607251 T--------T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9109281 2 -  10337057 T--------T
i Elephantulus_edwardii.JH947257.1                       C 0 I 177
s Ellobius_lutescens.LOEQ01008920.1                          31403 2 +    110024 T--------T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13374 2 +     18970 T--------T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916509 2 +  41312741 T--------T
i Enhydra_lutris.KZ291758.1                              C 0 I 41
s Eptesicus_fuscus.JH977646.1                             12579283 2 +  14770903 T--------T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041779 2 -   4378816 T--------T
i Equus_asinus.JREZ01000139.1                            I 37 C 0
s Equus_caballus.CM000403.2                               21375717 2 +  39960074 T--------T
i Equus_caballus.CM000403.2                              I 37 C 0
s Equus_przewalskii.ATBW01110277.1                            1098 2 -      1194 T--------T
i Equus_przewalskii.ATBW01110277.1                       I 37 I 79
s Erinaceus_europaeus.JH835339.1                           3666442 2 +   7059049 T--------T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263551 2 +  21539334 C--------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71510 2 -    133382 T--------T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202             1054 2 -      1170 T--------T
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               15170 2 -     24895 T--------T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42880 2 -     70999 T--------T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86850 2 +    112731 T--------T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43413 2 +     68309 T--------T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53737 2 -     65740 T--------T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24369 2 -     75513 T--------T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48564 2 -     97555 T--------T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5288 2 +     30972 T--------T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43008 2 -     52037 T--------T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59411 2 -    111500 T--------T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247207 2 - 206538554 T--------T
i Felis_catus.CM001381.2                                 C 0 I 41
s Felis_catus_fca126.CM031415.1                          185116993 2 - 205367284 T--------T
i Felis_catus_fca126.CM031415.1                          C 0 I 41
s Felis_nigripes.FelNig_flattened_line_31944                 28090 2 -     30238 T--------T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 41
s Fukomys_damarensis.KN121974.1                            2916807 2 -   3816255 T--------C
i Fukomys_damarensis.KN121974.1                          C 0 I 33
s Galago_moholi.ctg3793                                     126045 2 -    137831 T--------T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9590 2 +     22493 T--------T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21661 2 -     32986 T--------C
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1553 2 -     28519 T--------T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91816 2 -     95226 T--------T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34876 2 -     36801 T--------T
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6173 2 -      8343 C--------T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255188 2 - 186649187 C--------T
i Gorilla_gorilla.LT578341.1                             C 0 I 78
s Graphiurus_murinus.GraMur_scaffold_10447                    2375 2 -     78134 T--------T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15095 2 -     40692 T--------T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36497 2 +     49394 T--------T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61365 2 -     66874 T--------T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10239 2 -     42923 T--------T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17238 2 -     53142 T--------T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31184 2 -    327341 T--------T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 41
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9490 2 +     48891 T--------T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932784 2 -  22651954 T--------T
i Heterocephalus_glaber.JH602082.1                       C 0 I 33
s Heterohyrax_brucei.HetBruBak_scaffold_154059                1508 2 +      4291 a--------c
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 I 82
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8001 2 -     36432 T--------T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551995 2 -   1711038 T--------T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1433 2 -      2730 T--------T
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143197 2 -    630532 C--------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70348 2 +     83186 T--------T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 41
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72247 2 +    143317 T--------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 33
s Hylobates_agilis.k141_1155965                               6231 2 +     12352 C--------T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13415 2 +     55766 C--------T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053015 2 + 191637585 C--------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801893 2 +  11177569 C--------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7532 1 -    135385 ---------T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 33
s Ictidomys_tridecemlineatus.JH393364.1                     387228 2 +   7955117 T--------T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2796 2 +     11955 T--------T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10402 2 -     16823 T--------T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72245 2 -     97402 T--------T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43637 2 +    110728 T--------T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63254 2 -     65777 T--------T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14759888 2 +  30322482 T--------T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4551 2 -     13097 T--------T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4305 2 +      5940 T--------T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4135 2 -      5717 T--------T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10507 2 -     11567 T--------T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11888 2 -     12945 T--------T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9402 2 +     29618 T--------T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9398 2 +     31569 T--------T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9408 2 +     24756 T--------T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9408 2 +     16388 T--------T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813885 2 -   3914936 T--------T
i Leptonychotes_weddellii.KB714746.1                     C 0 I 41
s Lepus_americanus.LepAme_scaffold_56121                     18252 2 +     24238 T--------T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341587 2 +    662738 T--------T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334552 2 -   1826925 C--------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11746 2 +     19643 T--------T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045416 2 -   6120653 T--------T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39082141 2 +  43346337 a--------t
i Loxodonta_africana.GL010049.1                          C 0 I 2473
s Lycaon_pictus.CM007581.1                                41615047 2 +  59628241 T--------T
i Lycaon_pictus.CM007581.1                               C 0 I 41
s Macaca_arctoides.k141_1757516                              45947 2 -     61512 C--------T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373609 2 -  60120075 C--------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25871 2 +     30207 C--------T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             709 2 -      5035 C--------T
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25824 2 +     30527 C--------G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37000 2 -     50087 C--------T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46744 2 +     51645 C--------T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415947 2 - 187317192 C--------T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400177 2 +  25927173 C--------T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49349 2 -     62418 C--------T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1886 2 +     14901 C--------T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45821 2 +     59329 C--------T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271729 2 +    668171 C--------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   373 2 -      5049 C--------T
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3527 2 +     17132 C--------T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223604 2 -    270270 T--------T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323017 2 +  24302211 C--------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357848 2 -    752769 C--------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673935 2 -    737560 t--------t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221231 2 +    317179 t--------t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501447 2 +  40650429 T--------T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150779 2 +    207569 T--------T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26607 2 -     74585 T--------T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 41
s Meriones_unguiculatus.MerUng_scaffold_7390                 50539 2 -    140813 T--------T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429641 2 +  29670104 T--------T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87871 2 +     93471 T--------T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10674 2 +     17804 T--------T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11174 2 -     12984 T--------T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19490 2 -     26561 T--------T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985238 2 +  93316391 T--------T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46620 9 +    145209 T-GGGGACTT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 52
s Micronycteris_hirsuta.MicHir_scaffold_2233                185467 2 +    200668 T--------T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962843 2 +  27267610 T--------T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363619 2 -   8254450 T--------T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42526 2 -     48117 T--------T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23051 2 -     27822 C--------T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8896 2 +     27589 T--------T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 41
s Mirza_zaza.k141_766280                                     53021 2 -     62432 T--------T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359976 2 +    437263 T--------T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179696 2 +    366855 T--------T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25938 2 -     82753 T--------T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18935 2 -     63510 T--------T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39596 2 +     47283 T--------T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593563 2 + 120012414 T--------T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41687952 2 + 129401213 T--------T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497246 2 + 130317789 T--------T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             83931 2 -     86153 T--------T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355531 2 +  14710649 T--------T
i Mustela_putorius.JH418006.1                            C 0 I 41
s Myocastor_coypus.MyoCoy_scaffold_15261                     63501 2 +     67721 T--------T
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 28
s Myotis_davidii.KB100139.1                                4388015 2 +   6019432 T--------T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120180 2 +    130748 T--------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946715 2 +   3037898 t--------t
i Nannospalax_galili.KL204047.1                          I 1 C 0
s Nasalis_larvatus.k141_1350636                              29700 2 +     34575 C--------T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232654 2 -   7148211 T--------T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128664 2 -    149072 T--------T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 18
s Nomascus_annamensis.k141_1771965                           54123 2 -    132029 C--------T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10218 2 -     16345 C--------T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16103 2 +     22201 C--------T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414324 2 -  22158432 C--------T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26501 2 -     54323 C--------T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198643 2 +   9404916 T--------T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 41
s Nycticebus_bengalensis.LG01                             93638646 2 + 196305487 T--------T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1249 2 -      9413 T--------T
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566026 2 - 199412804 T--------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557314 2 -   3988456 T--------T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055457 2 -  11899542 T--------T
i Octodon_degus.JH651603.1                               C 0 I 28
s Odobenus_rosmarus.KB229312.1                             1452102 2 +   2017862 T--------T
i Odobenus_rosmarus.KB229312.1                           C 0 I 41
s Odocoileus_virginianus.KZ100018.1                         436706 2 -    630418 T--------T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14699 2 +    150152 T--------T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 201
s Ondatra_zibethicus.OndZib_scaffold_7387                    93200 2 -    140218 T--------T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4080 2 -     41509 T--------T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103044 2 +  10937097 T--------T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_1069005               459 2 -       505 a--------t
i Orycteropus_afer.OryAfe_flattened_line_1069005         C 0 N 0
s Oryctolagus_cuniculus.CM000791.1                       107104046 2 - 174332312 T--------T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39688 2 +    559221 T--------T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 41
s Otolemur_crassicaudatus.k141_649260                        41191 2 -     51505 T--------T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354195 2 +   1103335 T--------T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404610 2 -  44047080 T--------T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5129 2 +     17875 T--------T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473217 2 - 189151597 C--------T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24913 2 -    230217 T--------T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 41
s Panthera_pardus.KV860321.1                              18462239 2 -  18783137 T--------T
i Panthera_pardus.KV860321.1                             C 0 I 41
s Panthera_tigris.KE722367.1                               3972898 2 +   8748460 T--------T
i Panthera_tigris.KE722367.1                             C 0 I 41
s Pantholops_hodgsonii.KE114653.1                          1616138 2 +   2937107 T--------T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243849 2 - 183742232 C--------T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10311 2 +     21308 C--------T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292884 2 -  20919399 C--------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22959 2 -     27687 C--------T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16105 2 +     16796 C--------T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22916 2 -     23640 C--------T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15511 2 +     78924 T--------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 41
s Perodicticus_ibeanus.k141_1921260                          27527 2 +     31479 T--------T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            19896 2 -     24908 T--------T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2229 2 +      9367 T--------T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247277 2 +  18517816 T--------T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32372 2 -     56120 T--------T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 33
s Phocoena_phocoena.PhoPho_flattened_line_24159               4570 2 -     63832 T--------T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3135 2 +     55023 C--------T
i Piliocolobus_badius.k141_2704958                       C 0 I 25
s Piliocolobus_gordonorum.k141_381342                         2673 2 -     89929 C--------T
i Piliocolobus_gordonorum.k141_381342                    C 0 I 25
s Piliocolobus_kirkii.k141_1310104                            3263 2 +     40849 C--------T
i Piliocolobus_kirkii.k141_1310104                       C 0 I 25
s Piliocolobus_tephrosceles.PDMG02000141.1                  254937 2 +  14605196 C--------T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 25
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4432 2 +     22231 T--------T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65259 2 +    207309 T--------C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6351 2 -     25401 T--------C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32095 2 +     58159 T--------C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32371 2 +     63561 T--------C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32131 2 +     51148 T--------C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557101 2 -   4542175 T--------C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32115 2 +     51125 T--------C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1568 2 +     19503 T--------T
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8526 2 +     39866 T--------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3608 2 -      9282 T--------T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43012 2 -     87950 T--------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43408 2 -     88961 T--------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8104 2 -     39403 T--------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43055 2 +     87928 T--------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8103 2 -     60166 T--------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15040 2 -     67232 T--------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42956 2 -     90634 T--------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44423 2 +     89403 T--------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178326 2 - 189387572 C--------T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193143 2 -   9816681 C--------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28280 2 +     69807 C--------T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45461 2 -     80239 C--------T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 1333 2 +      7663 A--------C
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 82
s Prolemur_simus.MPIZ01000396.1                            1983036 2 +   4620579 T--------T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566547 2 -   2598838 T--------T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4185 2 -      7103 T--------T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4782 2 -     11706 T--------T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8520 2 -     30655 T--------T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34833 2 +     46564 T--------T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95112 2 -     98465 T--------T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8751 2 +     35169 T--------T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37883 2 +     52041 T--------T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52589 2 -     66298 T--------T
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5104 2 -     18639 T--------T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 41
s Pteropus_alecto.KB030862.1                               5841177 2 -  28871421 t--------t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537692 2 -   4952924 t--------t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099556 2 +  38429054 T--------T
i Puma_concolor.QAVW01001104.1                           C 0 I 41
s Pygathrix_cinerea.k141_1153803                             27656 2 +     91421 C--------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154140 2 -   7812017 C--------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8513 2 +     72585 C--------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53623 2 +     55069 T--------T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023168 2 -  90668790 G--------T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915157 2 +   3329780 T--------T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2234 2 +      7119 C--------T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122850 2 + 195417433 C--------T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237076 2 -   7961872 C--------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75222 2 -    116970 T--------T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4415 2 +     27962 T--------T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4309 2 +      6077 T--------T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4399 2 +      5971 T--------T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4320 2 +      5932 T--------T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2662 2 -      4390 T--------T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392099 2 - 209938924 T--------T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4269 2 +      5979 T--------T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                838 2 -     22275 T--------T
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8298 2 +     16473 T--------T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109434 2 + 121099817 T--------T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31001 2 -     47369 T--------T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31387 2 -     79414 T--------T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28078 2 -     34454 T--------T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15479 2 -     22428 T--------T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30633 2 -     47109 T--------T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238679 2 +   5703754 T--------T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8269 2 +     21866 T--------T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116338 2 +    313613 T--------T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         25975 2 +     27374 C--------T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29487 2 +     58920 C--------T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15985 2 -     45317 C--------T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23643 2 -     42441 C--------T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26321 2 -     29113 C--------T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29396 2 -     48123 C--------T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49655 1 +     77746 ---------T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864615 2 -   1910179 A--------T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671724 2 +  18376816 T--------T
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868807 2 +   3870691 T--------T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7188 2 -     97271 T--------T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 41
s Suricata_suricatta.SurSur_flattened_line_6629             125335 2 +    196729 T--------T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644204 2 +  69701581 T--------T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391583 2 +   1523678 C--------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14754 2 +     22964 T--------T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3171 2 +      5583 T--------T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192060 2 +    199430 T--------T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 34
s Tapirus_terrestris.TapTer_scaffold_755                    106030 2 -    539355 T--------T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 34
s Tarsius_lariang.k141_1733899                                1094 2 +      9917 T--------T
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7892 2 +     20590 T--------T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353835 2 - 186847797 C--------T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24531 2 -     33621 T--------T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 33
s Tonatia_saurophila.TonSau_scaffold_294                    480582 2 -    610378 T--------T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21520 2 +     26378 C--------T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34196 2 -     78344 C--------T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20845 2 +     25722 C--------T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29152 2 -     62838 C--------T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29196 2 +     46913 C--------T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10005 2 -     28527 C--------T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31087 2 -     64340 C--------T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29125 2 -     63452 C--------T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10572 2 +     22490 C--------T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3995 2 -      6147 C--------T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10908 2 -     13050 C--------T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256138 2 -   6242583 C--------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2166 2 +     19340 C--------T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173912 1 -    200418 ---------T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6480961 2 -  10818551 A--------G
i Trichechus_manatus.JH594705.1                          C 0 I 413
s Tupaia_chinensis.KB320699.1                              1834835 2 -   4065304 T--------T
i Tupaia_chinensis.KB320699.1                            C 0 I 33
s Tupaia_tana.TupTan_flattened_line_394                       8852 2 -     70247 T--------T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 33
s Tursiops_truncatus.MRVK01000835.1                       17366157 2 -  33153633 T--------T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4065 2 -     21056 T--------T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 42
s Ursus_maritimus.KK499267.1                                182274 2 +   5085361 T--------T
i Ursus_maritimus.KK499267.1                             C 0 I 46
s Varecia_rubra.k141_787544                                  25688 2 -     30710 T--------T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24595 2 -    147434 T--------T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76743 2 +   5488506 T--------T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105409 2 -    112863 T--------T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 41
s Xerus_inauris.XerIna_scaffold_2302                        174603 2 -    224448 T--------T
i Xerus_inauris.XerIna_scaffold_2302                     I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29310 2 -     86975 T--------T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 41
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1446 2 +      2126 T--------T
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   20177 0 -     31044 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13085 0 -     19938 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Zapus_hudsonius.ZapHud_scaffold_286923                       432 0 -      1899 C
e Myotis_myotis.MyoMyo_scaffold_66571                         2619 3 +     18357 I
e Myotis_lucifugus.GL429869.1                               383810 3 +   4330536 I
e Myotis_brandtii.KE162005.1                               9793851 3 +  10118263 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Jaculus_jaculus.JH725527.1                               1240262 0 +   9596543 C
e Allactaga_bullata.AllBul_scaffold_20030                    18511 2 -     61208 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5875 78 +     36723 TG--G---TT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CTTTCGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
s Acinonyx_jubatus.LLWD01001279.1                           813341 34 +   1699592 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTA----TT-A-------TGA-C-----TACTA-T-T---GGCAGGTAG-----------A
i Acinonyx_jubatus.LLWD01001279.1                        I 41 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25547 66 +     63021 TG--G---GT--AAAA-GT-GCAA-----T-------C-T-A-TCC---A--------------C---------TAG---------CAGCTGT-----T---G---A--------------------------GT--GTG-----------TA----T-TG-AT------T----TCCA----TT-A-------TGG-C-----TACTT----------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 12
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415808 24 +  29979442 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tt-a-------tga-c-----tactt-t-t---gtcatgtag-----------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 46 C 0
s Ailurus_fulgens.LNAC01001112.1                            216140 34 +    347723 -------------------------------------------------------------------------------------------------------------------------------------------------------------t-tg-ag------c----tcta----tt-a-------tga-c-----tactt-t-t---gtcatgtag-----------a
i Ailurus_fulgens.LNAC01001112.1                         I 41 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18513 47 -     61208 ------------------------------------------------------------------------------------------TGG-----TC------C--------------------------AT--GTA-----------TA----C-TG-AT------T----TCCA----TT-A-------TGG-C-----TACAT-T-T---GGCATATTA-----------A
i Allactaga_bullata.AllBul_scaffold_20030                I 2 I 1
s Allenopithecus_nigroviridis.k141_3755588                   48513 78 +     53615 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           544 78 +     13857 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17095 78 -     21945 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18780 78 +     32033 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72623 76 -     84148 CA--A---T-----AG-GT-GCAA-----T-------G-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCG----TG-A-------TGA-T-----TACGT-T-T---GGCAGGTAG-----------G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44862 76 -     78289 CA--A---T-----AG-GT-GCAA-----T-------G-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCG----TG-A-------TGA-T-----TACGT-T-T---GGCAGGTAG-----------G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44301 76 +     55831 CA--A---T-----AG-GT-GCAA-----T-------G-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCG----TG-A-------TGA-T-----TACGT-T-T---GGCAGGTAG-----------G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42751 76 -     64179 CA--A---T-----AG-GT-GCAA-----T-------G-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCG----TG-A-------TGA-T-----TACGT-T-T---GGCAGGTAG-----------G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24385 76 -     24835 CA--A---T-----AG-GT-GCAA-----T-------G-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCG----TG-A-------TGA-T-----TACGT-T-T---GGCAGGTAG-----------G
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41376 76 +     45454 CA--A---T-----AG-GT-GCAA-----T-------G-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCG----TG-A-------TGA-T-----TACGT-T-T---GGCAGGTAG-----------G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47025 76 +     70886 CG--G---T-----AG-GT-GCAA-----T-------G-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCG----TG-A-------TGA-T-----TACGT-T-T---GGCATGTAG-----------G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9198 76 +     30854 CA--A---T-----AG-GT-GCAA-----T-------G-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCG----TG-A-------TGA-T-----TACGT-T-T---GGCAGGTAG-----------G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33332 76 +     42133 CA--A---T-----AG-GT-GCAA-----T-------G-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCG----TG-A-------TGA-T-----TACGT-T-T---GGCAGGTAG-----------G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585745 81 +   2318259 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C--------CCAG---------TACTTGT-----G---G---C--------------------------GT--ATG-----------CA----TTTA-AA------C----TCTA----TT-A-------CGA-C-----TACTT-T-T---GGCACATAG-----------A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177547 78 -    412891 TA--G---AT--AAAG-GT-GAAG-----T-------T-T-A-TTC---GA-------------C---------CAA---------CATTTGT-----T---G---T--------------------------CG--GTA-----------CA----C-TG-AA------C----TCTA----TT-A-------TGA-C-----ACTT--C-T---GTCGtgcag-----------a
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50852 81 -     68529 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AG-------------C--------CCAG---------TACTTAT-----G---G---C--------------------------AT--ATG-----------CC----TGTA-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCACATAG-----------A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1589 76 +     17741 CG--G---T-----AG-TT-GCGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2214 76 -     15923 CG--G---T-----AG-TT-GCGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672496 76 +   5030052 CG--G---T-----AG-TT-GCGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2490 76 -     16391 CG--G---T-----AG-TT-GCGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2049 76 -     17186 CG--G---T-----AG-TT-GCGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16558 80 -     32367 CA--G---AT--ACAG-GT-GCAA-----T-------T-TTT-TTC---AA-------------C---------CAA---------CATTTTT-----T---G---T--------------------------AT--ATG-----------CA----T-TG-AT------T----TCCA----TG-A-------TGG-C-----TATTT-T-T---CAGAAGTAC-----------A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20684 54 -     45910 -G--G---AT--AAAG-AT-ATAA-----T-------T-T-A-TTT---AA-------------T---------CAG---------AATTTGT-----T---G---T--------------------------AT--GTT-----------CA----T-CA-AA------T----CCTA----------------------------------------------------------
i Arctocebus_calabarensis.k141_1364444                   C 0 I 19
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5813 78 -     15198 TA--G---AT--AAAG-GT-GAAG-----T-------T-T-A-TTC---AA-------------T---------CAA---------CATTTGT-----T---G---T--------------------------CC--ATA-----------CA----C-TG-AA------C----TCTA----TT-A-------TGA-T-----ACTT--C-T---GTCGTGCAG-----------A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275086 76 +  21539123 CA--G---T-----AG-GT-GCAC-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11254 76 +     48076 CA--G---T-----AG-GT-GTAC-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TGCTT-T-T---GGCAGGTAG-----------A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6389 76 -     28759 CA--G---T-----AG-GT-GCAC-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              33943 76 +     44353 CA--G---T-----AG-GT-GCAC-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49314 76 -     71267 CA--G---T-----AG-GT-GCAC-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23372 76 -     33135 CA--G---T-----AG-GT-GCAC-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6654 78 +     11645 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAG---------TATTTGT-----T-A-----T--------------------------AT--GTG-----------CA----T-TG-AA------T-----CCA----TT-A-------TGA-C-----TACTT-T-G---GGCACAGAG-----------A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6662 78 -     19611 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAG---------TATTTGT-----T-A-----T--------------------------AT--GTG-----------CA----T-TG-AA------T-----CCA----TT-A-------TGA-C-----TACTT-T-G---GGCACAGAG-----------A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963895 80 -  23207421 TG--G---AT--GAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------G---------CAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------AA----TTTG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCATGTAG-----------A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          395 80 -     25979 TG--G---AT--GAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------G---------CAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------AA----TTTG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCATGTAG-----------A
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86753 81 +    124022 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C--------CCAG---------TACTTGT-----G---G---T--------------------------GT--ATG-----------CA----TTTA-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCACGTAG-----------A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22287 89 +    288883 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TGC---AA-------------C--------CCAG---------TACTTGT-----G---G---C--------------------------AT--ATG-----------CA----TTTA-GA------C----TCTA----TT-A-------TGA-C-----TACAT-T-T---GGCACatagagaaat-a-g-a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356679 87 +  48749331 TG--G---AN--AAAG-GT-GCAA-----T-------T-T-A-TGC---AA-------------C--------CCAG---------TNCTTGT-----G---G---C--------------------------AT--ATG-----------CA----TTTA-GA------C------TA----TT-A-------TGA-C-----TACAT-T-T---GGCACatagagaaat-a-g-a
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755243 87 +   1948126 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TGC---AA-------------C--------CCAG---------TACTTGT-----G---G---C--------------------------AT--ATG-----------CA----TTTA-GA------C------TA----TT-A-------TGA-C-----TACAT-T-T---GGCACatagagaaat-a-g-a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545385 87 -  45695690 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TGC---AA-------------C--------CCAG---------TTCTTGT-----G---G---C--------------------------AT--ATG-----------CA----TTTA-GA------C------TA----TT-A-------TGA-C-----TACAT-T-T---GGCACatagagaaat-a-g-a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530406 81 -   4408762 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TGC---AA-------------C--------CCAG---------TACTTGT-----GC------C--------------------------AT--ATG-----------CA----TTTA-GA------C----TCTA----TT-A-------TGA-C-----TACAT-T-T---GGCACATAG-----------A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8263 76 +     28062 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TG-A-------TGA-T-----TGCTT-T-T---GGCAGGAAG-----------A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43557 76 -     91139 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TG-A-------TGA-T-----TGCTT-T-T---GGCAGGAAG-----------A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21083 76 +     95584 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TG-A-------TGA-T-----TGCTT-T-T---GGCAGGAAG-----------A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         20996 76 +    119600 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TG-A-------TGA-T-----TGCTT-T-T---GGCAAGAAG-----------A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10569 76 +     18648 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10104 76 -     13885 CG--G---T-----AG-TT-GAGA-----T-------C-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2174 76 -      8861 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454566 76 + 189096842 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2089 76 +      8664 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631411 80 +  17673402 TG--G---AT--GAAG-GT-GCAG-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------CA----TTTG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCATGTAG-----------A
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           4665697 80 +   7040546 TG--G---AT--GAAG-GT-GCAG-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------CA----TTTG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCATGTAG-----------A
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                 1209357 80 +   1652518 TG--G---AT--GAAG-GT-GCAG-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------CA----TTTG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCATGTAG-----------A
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           42505821 34 +  60362399 -------------------------------------------------------------------------------------------------------------------------------------------------------------C-TG-AA------C----TTTA----CT-A-------TGA-C-----TACTT-T-T---GTCATGAAG-----------A
i CanFam4.chr16                                          I 41 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9457 34 -     23171 -------------------------------------------------------------------------------------------------------------------------------------------------------------C-TG-AA------C----TTTA----CT-A-------TGA-C-----TACTT-T-T---GTCATGAAG-----------A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 41 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222800 34 +   9314153 -------------------------------------------------------------------------------------------------------------------------------------------------------------C-TG-AA------C----TTTA----CT-A-------TGA-C-----TACTT-T-T---GTCATGAAG-----------A
i Canis_lupus_dingo.QKWQ01000480.1                       I 41 C 0
s Canis_lupus_familiaris.chr16                            41615935 34 +  59632846 -------------------------------------------------------------------------------------------------------------------------------------------------------------C-TG-AA------C----TTTA----CT-A-------TGA-C-----TACTT-T-T---GTCATGAAG-----------A
i Canis_lupus_familiaris.chr16                           I 41 C 0
s Canis_lupus_orion.HG994398.1                            45107516 34 -  63665305 -------------------------------------------------------------------------------------------------------------------------------------------------------------C-TG-AA------C----TTTA----CT-A-------TGA-C-----TACTT-T-T---GTCATGAAG-----------A
i Canis_lupus_orion.HG994398.1                           I 41 C 0
s Capra_aegagrus.CM003241.1                               27409474 81 -  46296322 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C--------CCAG---------TACTTGT-----G---G---T--------------------------GT--ATG-----------CA----TTTA-AA------C----TCTA----TT-A-------CGA-C-----TACTT-T-T---GGCACATAG-----------A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591748 81 +  44709034 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C--------CCAG---------TACTTGT-----G---G---C--------------------------GT--ATG-----------CA----TTTA-AA------C----TCTA----TT-A-------CGA-C-----TACTT-T-T---GGCACATAG-----------A
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270863 79 +    496798 ta--a---at--cAAG-GA-GCAA-----G-------T-C-A-TTC---AA-------------C---------CAG---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----C-TG-AA------T----TTTA----TT-A-------TGA-T-----TACTT-T-T---GAAATGTGA-----------A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                669 78 +      9923 TA--G---AT--AAAG-GT-GGAG-----T-------T-T-A-TTC---AA-------------C---------CGA---------CATTTGT-----T---G---T--------------------------CG--GTG-----------CA----C-TG-AA------C----TCTA----TT-A-------TGG-A-----GCTT--C-T---GTCGTGCAG-----------A
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28065 81 -     39886 TG--G---AC--AGTG-TT-ACAA-----C-------T-T-A-ATT---AA-------------C---------TAT---------TATTTGT-----T---G---T--------------------------AT--ATG-----------AA----T-GG-TTGC----A----TCCA----TT-G-------TGA-C-----TTTTT-T-G---GGCAAGTAG-----------A
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     79949 80 -    217609 TG--C---AT--AAAG-GA-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CAGTTGT-----T---G---C--------------------------AT--GTG-----------CA----TTTG-AA------C----TGTA----TT-A-------TGA-C-----TACTT-T-T---GGCATGTAG-----------A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996845 35 +  23392119 -------------------------------------------------------------------------------------------------------------------------------------------------------AT----T-TG-AA------T----TTCA----TT-A-------TGA-C-----TACTT-T-T---GGCTT-TAG-----------A
i Cavia_aperea.AVPZ01000300.1                            I 33 C 0
s Cavia_porcellus.DS562891.1                               5000286 35 +  23407841 -------------------------------------------------------------------------------------------------------------------------------------------------------AT----T-TG-AA------T----TTCA----TT-A-------TGA-C-----TACTT-T-T---GGCTT-TAG-----------A
i Cavia_porcellus.DS562891.1                             I 33 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63367 35 -     66877 -------------------------------------------------------------------------------------------------------------------------------------------------------AT----T-TG-AA------T----TTCA----TT-A-------TGA-C-----TACTT-T-T---GGCTT-TAG-----------A
i Cavia_tschudii.CavTsc_scaffold_23560                   I 33 C 0
s Cebuella_niveiventris.k141_592277                           5487 76 -     12580 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43578 42 +     53515 ----------------------------------------------------------------------------------------------------------T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Cebuella_pygmaea.k141_145798                           I 33 C 0
s Cebus_albifrons.Contig27                                  373307 76 -  26074798 CT--G---T-----AG-CT-GCGA-----T-------T-T-A-TTC---AA-------------A---------CGA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8361 76 -     34880 CT--G---T-----AG-CT-GCGA-----T-------T-T-A-TTC---AA-------------A---------CGA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67457 76 -     89041 CT--G---T-----AG-CT-GCGA-----T-------T-T-A-TTC---AA-------------A---------CGA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2823 79 -      5494 TA--A---AT--CAAG-GA-GCAA-----G-------T-C-A-TTC---AA-------------C---------CAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----C-TG-AA------T----TTTA----TT-A-------TGA-T-----TACTT-T-T---GAAATGTGA-----------A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492583 79 -  27778364 TG--G---AT--AAAT-GT-Gcaa-----t-------t-t-a-ttc---aa-------------c---------caa---------catttgT-----T---G---T--------------------------GT--GTA-----------CA----T-TG-AA------C----TCTA----GT-A-------TGA-C-----TACTT-T-G---GGCATGTAG-----------A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19416 79 +     27315 TG--G---AT--AAAT-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----T---G---T--------------------------GT--GTA-----------CA----T-TG-AA------C----TCTA----GT-A-------TGA-C-----TACTT-T-G---GGCATGTAG-----------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141669 78 -   4669795 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45412 78 +     47900 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            841 78 -     14410 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTA-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45225 78 -    148725 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27427 78 -     40656 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7391 78 +     20796 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12509 78 -     17524 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28236 56 -     34525 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT----------------------------------------------------
i Cercopithecus_hamlyni.k141_566925                      C 0 I 20
s Cercopithecus_lowei.k141_2101310                           12012 78 -     25376 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364606 78 -  39242232 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270326 78 +  21565898 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32694 78 -     45857 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27595 78 -     32606 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CT----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3757 78 +      8499 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26153 78 +     70610 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23122 70 +     36323 ---------------G-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Cercopithecus_roloway.k141_3012935                     I 1 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13085 79 -     19938 TG--G---AT--AAGG-GT-GCAA-----T-------T-T-A-CTG---CA-------------C---------CAA---------CATTTGT-----T---G---T--------------------------GT--ATG-----------CA----T-TA-AA------C----TATG----TT-A-------TGC-C-----TACTT-T-T---GACATAGAA-----------A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31027 79 -     33796 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T---G---C--------------------------AT--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-G---GGCACAGAG-----------A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5544 79 -     15404 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T---G---C--------------------------AT--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-G---GGCACAGAG-----------A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9363 76 -     32913 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGAAG-----------A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19776 76 -     40346 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGAAG-----------A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20031 76 +    216457 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGAAG-----------A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19824 76 +     39636 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGAAG-----------A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239197 36 -   2543920 -------------------------------------------------------------------------------------------------------------------------------------------------------AT----T-TG-AA------T----TCCA----TT-A-------TGA-C-----CTCTT-T-T---GGCACATAG-----------A
i Chinchilla_lanigera.JH722012.1                         I 29 C 0
s Chiropotes_albinasus.k141_1946120                           4419 76 +      5346 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42894 76 -    112038 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TG-A-------TGA-T-----TGCTT-T-T---GGCAGGAAG-----------A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8465 76 +     34062 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TG-A-------TGA-T-----TGCTT-T-T---GGCAGGAAG-----------A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344015 78 +  18827391 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10598 39 -     44032 -----------------------------------------------------------------------------------------------------------------------------------------GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Chlorocebus_pygerythrus.k141_3063162                   I 35 C 0
s Chlorocebus_sabaeus.CM001947.1                            305340 78 - 135778131 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15214 79 +     15858 GG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----T---G---T--------------------------GA--GTG-----------CA----T-TG-AA------C----TATG----TT-A-------TGC-C-----TACTT-T-T---GACATGGAG-----------A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606789 79 -    839153 GG--G---AT--AAAG-GT-GCAa-----t-------t-t-a-ttc---aa-------------c---------caa---------catttgt-----t------gt--------------------------ga--gtg-----------ca----t-tg-aa------c----tatg----tt-a-------tgc-c-----tactt-t-t---gacatggag-----------a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1270 97 +      2406 --------------------------------------------------------------------------AAA---------TATTTACCA---T------TTTTAttattttttaaacatagtagtaaat--ata-----------ta----c-gt-aa------tga-atcat----tt-gccatgtt--a-t-----tactc-t-t---cacatacaca-a-tt-ctg-a
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          I 17 I 616
s Colobus_angolensis.KN981557.1                             409745 78 -   2368649 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GCG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379626 78 - 200372422 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GCG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3183 78 -     84244 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GCG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807646 24 +  53390261 CA--G---GT--AAAG-GT-ACAA-----T-------T-T-A-TTC---AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Condylura_cristata.JH655891.1                          C 0 I 31
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3176 67 -      8242 TG--G---AT--AAAG-GT-GTAG-----T-------T-T-A-TTT---GA-------------C---------CAA---------CATTTGT-----T---G---T--------------------------GT--ATA-----------CA----T-TG-AA------C----ATTA----TT-A-------TGA-C-----TACTT----------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 12
s Cricetomys_gambianus.CriGam_scaffold_14425                 44683 66 -     83289 TG--G---AT--AAAA-GT-GCAG-----T-------T-T-A-GCC---A--------------C---------TAG---------CCATTGT-----T---G---A--------------------------AT--GGG-----------TA----T-TG-AT------T----TCCA----TT-A-------TGG-C-----TACTT----------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 12
s Cricetulus_griseus.LT883664.1                          213115259 66 - 224834208 TG--G---AT--AAAA-GT-GCCA-----T-------T-T-A-GCT---A--------------C---------CAG---------CAGTTGT-----T---G---A--------------------------GT--GGC-----------CA----T-TG-AT------T----TCCA----TT-A-------TGG-C-----TACTT----------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 12
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4794 34 +     87169 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCAGGTAG-----------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 41 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9788 35 +     12657 TG--G---AC--AGCGGGG-GCAA-----T-------T-T-A-TTA---GT-------------C---------CAG---------CAATTA-------------------------------------------------------------------------------------------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 45
s Ctenodactylus_gundi.CteGun_scaffold_65                    645382 81 -   1526836 TT--G---AT--AAAA-GT-GCAA---CAT-------T-T-A-TTT---AA-------------C---------CAG---------TATTTGC-----T---G---T--------------------------GT--GTG-----------TT----T-TG-AA------T----TTTG----TT-G-------TGG-C-----TACTt-t-t---ggcaagtag-----------g
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4762 35 +     36344 -------------------------------------------------------------------------------------------------------------------------------------------------------AT----T-TG-AA------T----TTCG----TT-A-------TGA-C-----TACTT-T-T---GGCAT-TAG-----------A
i Cuniculus_paca.CunPac_flattened_line_7025              I 33 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28538 35 +     75252 -------------------------------------------------------------------------------------------------------------------------------------------------------AT----T-TG-AA------T----TTCA----TT-G-------TGA-C-----TACTT-T-T---GGCAT-TAG-----------A
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 33 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18721 30 +     50838 TT--T---AT--AAAA-GT-A--G-----T-------T-T-A-TTT---AA-------------C---------TTG----------ATTG--------------------------------------------------------------------------------------------------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 34
s Dasypus_novemcinctus.JH564415.1                          2110439 79 -   2246927 TG--G---AC--AAAG-GT-GCAA-----T-------T-T-A-CTC---CA-------------C---------CAA---------CATTTGT-----T---G---T--------------------------GT--ATG-----------CC----T-TG-AA------C----GATG----GT-A-------TAC-C-----TATTT-T-T---gacatagaa-----------a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        292963 79 +  12879189 TG--G---AT--AAAG-GT-GCAA-----T-------A-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T-A-----T--------------------------AT--GTG-----------CA----T-TG-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-T---GGCACAGAG-----------A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632303 80 -  35494412 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------G---------CAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------CA----TATG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCACGTAG-----------A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330864 78 -   2620052 TA--G---AT--AAAG-GT-GAAG-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----T---G---T--------------------------CG--GTA-----------CG----C-TG-AA------T----GCTA----TT-A-------TGA-C-----ACTT--C-T---GTCGTGCAG-----------A
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664867 79 -   1390856 TG--G---AT--AAAC-GT-GCAa-----t-------t-t-a-ttc---aa-------------c---------caa---------catttGT-----T---G---T--------------------------GT--GTA-----------CA----T-TG-AA------C----TCTA----GT-A-------TGA-C-----TACTT-T-G---GGCATATGG-----------A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139660 79 -    198055 TG--G---AT--AAAT-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----T---G---T--------------------------GT--GTA-----------CA----T-TG-AA------C----TCTA----GT-A-------TGA-C-----TGCTT-T-G---GGCATGTAG-----------A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99285 36 -    115145 -------------------------------------------------------------------------------------------------------------------------------------------------------AT----T-TG-AA------T----TCCA----TT-A-------TGA-C-----CTCTT-T-T---GGTACATAG-----------A
i Dinomys_branickii.DinBra_scaffold_10381                I 29 C 0
s Dipodomys_ordii.KN672350.1                              18950878 84 -  37912305 CA--A---GT--A----AG-tcaa-----a-------t-t-a-att---aa-------------c-taattaatcaG---------CATTTGT-----T-A-----T--------------------------AT--CTA-----------CA----T-TG-AT------T----TTCA----TC-A-------TGA-C-----TACTT-T-G---GGCACGTAG-----------G
i Dipodomys_ordii.KN672350.1                             C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_89095                   5803 85 -     10735 CA--A---GT--A----AA-TCAA-----A-------T-T-A-ATT---AA-------------CTAATTTAATCAG---------CATTTGT-----T-A-----T--------------------------AT--CTA-----------CA----T-TG-AT------T----TTCA----TC-A-------TGA-C-----TACTT-T-G---GGCACGTAG-----------G
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 1
s Echinops_telfairi.JH980293.1                            62855430 76 - 111700974 --------------------------------------------------------------------------------------------------T------TTTTACTCTTCTGAAAATTGTg--gcaaat--ata-----------ta----t-gt-aa------caa-aacat----ta-a---------A-C-----CAATA-T-T---CTCATGTCCag--ttca-a-t
i Echinops_telfairi.JH980293.1                           I 58 I 511
s Eidolon_helvum.AWHC01266696.1                               6639 79 +     19438 ca--c---at--aAAG-GT-GCAA-----T-------T-T-A-TTT---GA-------------C---------CGA---------CATTAGT-----T-A-----C--------------------------GT--GTA-----------CA----T-TA-AC------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCacatag-----------a
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240115 81 -    607251 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C--------CCAG---------TGCTTGT-----G---G---C--------------------------AT--ATG-----------CA----TTTC-AA------C----TCTA----TT-A-------TGA-C-----TGCTT-T-T---GGCACATAG-----------A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226107 54 +  10337057 --------------------------------------------------------------------------CAA---------CATTTGT-----T---G---T--------------------------GA--ATT-----------TG----C-TA-AA------C----TCTA----TT-A-------TAC-T-----TACTT-T-T---GGCATGtag-----------a
i Elephantulus_edwardii.JH947257.1                       n 177 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31405 66 +    110024 TG--G---AT--AAAA-GT-GCTT-----T-------T-T-A-GCT---A--------------C---------TAG---------CAGTTGT-----T---G---A--------------------------GT--GTG-----------CA----T-TG-AT------T----TTCA----TT-A-------TGG-C-----TACTT----------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 12
s Ellobius_talpinus.LOJH01026522.1                           13376 66 +     18970 TG--G---AT--AAAA-GT-GCTT-----T-------T-T-A-GCT---A--------------A---------TAG---------CAGTTGT-----T---G---A--------------------------GT--GTG-----------CA----T-TG-AT------T----TTCA----TT-A-------TGG-C-----TACTT----------------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 12
s Enhydra_lutris.KZ291758.1                               24916552 34 +  41312741 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-GG-AA------C----TCTA----TT-A-------TTA-C-----TACTT-T-T---GTCATGTAG-----------A
i Enhydra_lutris.KZ291758.1                              I 41 C 0
s Eptesicus_fuscus.JH977646.1                             12579285 80 +  14770903 TA--G---AT--AAAG-GT-Gaaa-----t-------t-t-a-ttc---aa-------------c---------caa---------gattcat-----t------gt--------------------------gg--gga-----------ca----t-tg-aa------c----tcta----tt-a-------tga-g-----tactttt-t---ggcatgtag-----------a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041781 79 -   4378816 AG--G---AT--AAAG-GT-GCAA-----T-------G-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----T---G---T--------------------------GT--GTA-----------CG----T-TG-AT------C----TCTA----TG-A-------TGA-C-----TACTT-T-T---GGTATGTGG-----------A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375719 79 +  39960074 AG--G---AT--AAAG-GT-GCAA-----T-------G-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----T---G---T--------------------------GT--GTA-----------CG----T-TG-AT------C----TCTA----TG-A-------TGA-C-----TACTT-T-T---GGTATGTGG-----------A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411626 79 -    498745 AG--G---AT--AAAG-GT-GCAA-----T-------G-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----T---G---T--------------------------GT--GTA-----------CA----T-TG-AT------C----TCTA----TG-A-------TGA-C-----TACTT-T-T---GGTATGTGG-----------A
i Equus_przewalskii.KK951119.1                           I 113 I 23
s Erinaceus_europaeus.JH835339.1                           3666444 34 +   7059049 CA--A---AT--AATG-GT-ACAT-----T-------T-G-a-atc---aa-------------c---------aaa---------tgttta-------------------------------------------------------------------------------------------------------------------------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 46
s Erythrocebus_patas.Contig38                               263553 78 +  21539334 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71512 80 -    133382 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------G---------CAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------AA----TTTG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCATGTAG-----------A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202             1056 80 -      1170 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------G---------CAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------AA----TTTG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCACGTAG-----------A
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 C 0
s Eulemur_albifrons.k141_51491                               15172 79 -     24895 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-G---GATACAGAG-----------A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42882 79 -     70999 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-G---GATACAGAG-----------A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86852 79 +    112731 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-G---GATACAGAG-----------A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43415 79 +     68309 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-G---GATACAGAG-----------A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53739 79 -     65740 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T---G---T--------------------------AC--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-G---GATACAGAG-----------A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24371 79 -     75513 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-G---GATACAGAG-----------A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48566 79 -     97555 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-G---GATACAGAG-----------A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5290 79 +     30972 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GG-AA------T----CTCT----TT-A-------TGA-C-----TACTT-T-G---GATACAGAG-----------A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43010 79 -     52037 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-G---GATACAGAG-----------A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59413 79 -    111500 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-G---GATACAGAG-----------A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247250 34 - 206538554 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCAGGTAG-----------A
i Felis_catus.CM001381.2                                 I 41 C 0
s Felis_catus_fca126.CM031415.1                          185117036 34 - 205367284 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCAGGTAG-----------A
i Felis_catus_fca126.CM031415.1                          I 41 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28133 34 -     30238 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCAGGTAG-----------A
i Felis_nigripes.FelNig_flattened_line_31944             I 41 C 0
s Fukomys_damarensis.KN121974.1                            2916842 36 -   3816255 -------------------------------------------------------------------------------------------------------------------------------------------------------CT----T-TG-CA------T----TCCA----TT-G-------TAA-C-----TACTT-T-T---GGCAtgtag-----------a
i Fukomys_damarensis.KN121974.1                          I 33 C 0
s Galago_moholi.ctg3793                                     126047 55 -    137831 TG--G---AT--AAAG-AT-ACAA-----T-------T-T-A-TTT---AA-------------C---------CAG---------TATTTGT-----T---G---T--------------------------AT--GTT-----------CA----T-CA-AA------T----CCTA----------------------------------------------------------
i Galago_moholi.ctg3793                                  C 0 I 19
s Galago_senegalensis.k141_991736                             9592 55 +     22493 TG--G---AT--AAAG-AT-ACAA-----T-------T-T-A-TTT---AA-------------C---------CAG---------TATTTGT-----T---G---T--------------------------AT--GTT-----------CA----T-CA-AA------T----CCTA----------------------------------------------------------
i Galago_senegalensis.k141_991736                        C 0 I 19
s Galagoides_demidoff.k141_561628                            21663 55 -     32986 TG--G---AT--AAAG-AT-ACAA-----T-------T-T-A-TTT---AA-------------C---------CAG---------TATTTGT-----T---G---T--------------------------AT--GTT-----------CA----T-CA-AA------T----ACTA----------------------------------------------------------
i Galagoides_demidoff.k141_561628                        C 0 I 19
s Galeopterus_variegatus.GalVar_scaffold_51812                1555 45 -     28519 TG--C---CT--AAAG-AT-GTTA-----T-------T-T-A-TTC---AA-------------C---------TAG---------CATTTGT-----T-A-----T--------------------------AT--GTG-----------CA------------------------------------------------------------------------------------
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 I 16
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91818 81 -     95226 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C--------CCAG---------TATTTGT-----G---G---C--------------------------AT--ATG-----------CC----TTTA-AA------C----TCTA----TT-A-------TGA-C-----TGCTT-T-T---GGCACATAG-----------A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34878 76 -     36801 TG--G---AC--AAAG-GT-GCAA-----T-------C-T-A-TTC---AA-------------A---------CAA---------CTTTTGT-----T---G---T--------------------------GT--GCA-----------TA----T-TG-AA------T----TTCA----CT-A-------TGG-C-----TACTG-T-T---GGGATGT--------------
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6175 78 -      8343 TG--G---TT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------G---------CAG---------CATTCGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------G----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCGTGGAG-----------A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 71668 78 +  33314783 TG--G---TT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CATTCGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------G----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCGTGGAG-----------A
i Gorilla_gorilla.LT578336.1                             I 1242 I 133
s Graphiurus_murinus.GraMur_scaffold_10447                    2377 76 -     78134 TG--G---AC--AAAG-GT-GCAA-----C-------T-T-A-TTC---AA-------------T---------CAA---------CATTTGT-----T---G---T--------------------------GT--GTG-----------CA----T-TA-AA------T----TTCA----CT-G-------TGG-C-----TACTG-T-T---GGGATAC--------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15097 79 -     40692 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------TAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GT-AA------T----CCCA----TT-A-------CGA-C-----TACTT-T-G---GACACAGAG-----------A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36499 79 +     49394 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------TAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GT-AA------T----CCCA----TT-A-------CGA-C-----TACTT-T-G---GACACAGAG-----------A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61367 79 -     66874 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------TAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GT-AA------T----CCCA----TT-A-------CGA-C-----TACTT-T-G---GACACAGAG-----------A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10241 79 -     42923 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------TAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GT-AA------T----CCCA----TT-A-------CGA-C-----TACTT-T-G---GACACAGAG-----------A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17240 79 -     53142 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------TAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GT-AA------T----CCCA----TT-A-------CGA-C-----TACTT-T-G---GACACAGAG-----------A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31227 22 -    327341 -------------------------------------------------------------------------------------------------------------------------------------------------------------t-tg-aa------c----tcta----tt-a-------tga-c-----tactt----------------------------
i Helogale_parvula.HelPar_flattened_line_2585            I 41 I 11
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9492 81 +     48891 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C--------CCAG---------TACTTGT-----G---G---C--------------------------GT--ATG-----------CA----TTTA-AA------C----TCTA----TT-A-------CGA-C-----TACTT-T-T---GGCACATAG-----------A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932819 36 -  22651954 -------------------------------------------------------------------------------------------------------------------------------------------------------CT----T-TG-AA------T----TCCA----CT-G-------TGA-C-----TACTT-T-T---GGTGTGTAG-----------A
i Heterocephalus_glaber.JH602082.1                       I 33 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                1592 55 +      4291 -----------------------------------------------------------------------------------------------------------------------------------------gta-----------tt----t-gc-aa------c-acatcct----ct-g-------tcgttattaatattc-a-t---cacatgtacag--ttca-g-c
i Heterohyrax_brucei.HetBruBak_scaffold_154059           I 82 I 2320
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8003 81 -     36432 TG--G---AT-TAAAG-GT-GCAA-----C-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----T---G---C--------------------------GT--GCG-----------CA----TTTG-AA------C----GCTA----TT-A-------TGA-C-----TACTT-T-T---GGCACGTAG-----------A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1551997 79 -   1711038 TG--G---AT--AAAG-GT-GCAa-----t-------t-t-a-ttt---ga-------------c---------caa---------catttgt-----t------gt--------------------------gt--gta-----------cg----t-tg-aa------c----ttta----tt-a-------tga-c-----aactt-t-t---ggcacatac-----------a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1435 79 -      2730 TG--G---AT--AAAG-CT-GCAA-----T-------T-T-A-TTT---GA-------------C---------CAA---------CATTTGT-----T---G---T--------------------------GT--TTA-----------CA----T-TG-AA------T----TTTA----TT-A-------TGA-C-----AACTT-T-T---GGCATGTAC-----------A
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143199 78 -    630532 TG--G---TT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CGTTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70391 34 +     83186 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTG----TT-A-------GGA-C-----TACTT-T-T---GGCAGGTAG-----------A
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 41 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72282 35 +    143317 -------------------------------------------------------------------------------------------------------------------------------------------------------AT----T-TG-AA------T----TTCA----TT-A-------TGA-C-----TACTT-T-T---GGCAT-TAG-----------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 33 C 0
s Hylobates_agilis.k141_1155965                               6233 78 +     12352 TG--G---TT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CGTTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13417 78 +     55766 TG--G---TT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CGTTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053017 78 + 191637585 TG--G---TT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CGTTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801895 78 +  11177569 TG--G---TT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CGTTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7566 36 -    135385 -------------------------------------------------------------------------------------------------------------------------------------------------------CT----T-TG-AA------T----TCTG----TT-G-------TGA-T-----TACTT-T-G---AGCATGTAG-----------A
i Hystrix_cristata.HysCri_scaffold_5660                  I 33 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387230 80 +   7955117 TG--G---AT--AAAG-GT-GTAA-----T-------TTT-T-TTC---AA-------------C---------CAT---------CATTTGT-----T---G---T--------------------------AT--GTG-----------CA----A-TG-AA------T----TCCG----TG-A-------TGG-C-----TACTT-T-G---GGgaagcag-----------a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2798 78 +     11955 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAG---------TATTTGT-----T-A-----T--------------------------AT--GTG-----------CA----T-TG-AA------T-----CCA----TT-A-------TGA-C-----TACTT-T-G---GGTACAGAG-----------A
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10404 80 -     16823 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------G---------GAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------CA----TTTG-AA------C----TCTG----TT-A-------TGA-C-----TACTT-T-T---GGCACGTAA-----------A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240262 77 +   9596543 ----A---AT--AAAA-GT-ATAC-----T-------T-T-A-GTT---GA-------------C---------CAA---------CATTTGT-----TC------C--------------------------AT--GTA-----------TA----C-TG-AT------T----TCCG----TT-A-------TGG-C-----TACAT-T-T---GGCATATTA-----------A
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_3970                 72247 80 -     97402 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------G---------CAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------CA----TTTG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCACGTAG-----------A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43639 76 +    110728 CG--G---T-----AG-GT-GCAC-----T-------T-T-A-TTC---AA-------------C---------CAG---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGG-T-----TACTT-T-T---GGCAGGTAG-----------A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63256 81 -     65777 TA--G---AT--AAAG-GT-Gaaa-----t-------t-t-a-ttc---aa-------------c---------cag---------cattcat-----t------gc--------------------------gg--gta-----------ca----c-tg-aa------c----tcta----tt-a-------tga-c-----tactttcgt---ggcatgtag-----------a
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14759890 79 +  30322482 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------TAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GT-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-G---GACACAGAG-----------A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4553 69 -     13097 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGC------------------
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4307 69 +      5940 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGC------------------
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4137 69 -      5717 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGC------------------
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10509 76 -     11567 CG--G---T-----AG-TT-GCGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11890 76 -     12945 CG--G---T-----AG-TT-GCGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9404 79 +     29618 TG--G---AT--AAAG-GT-GCAA-----T-------T-C-A-TTT---AA-------------A---------CGA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TAATT-C-G---GACACAGAG-----------A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9400 79 +     31569 TG--G---AT--AAAG-GT-GCAA-----T-------T-C-A-TTT---AA-------------A---------CGA---------TATTTGT-----T---G---T--------------------------AG--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TAATT-T-G---GACACAGAG-----------A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9410 79 +     24756 TG--G---AT--AAAG-GT-GCAA-----T-------T-C-A-TTT---AA-------------A---------CAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TAATT-T-G---GACACAGAG-----------G
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9410 79 +     16388 TG--G---AT--AAAG-GT-GCAA-----T-------T-C-A-TTT---AA-------------A---------CGA---------TATTTGT-----T---G---T--------------------------AG--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TAATT-T-G---GACACAGAG-----------A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813928 34 -   3914936 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GTCATGTAG-----------A
i Leptonychotes_weddellii.KB714746.1                     I 41 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18254 79 +     24238 TG--G---TT--AAAG-GT-TCAG-----G-------T-T-A-TTC---AG-------------C---------CAG---------TAGTTGT-----T---G---T--------------------------AT--GTA-----------CA----T-CG-AA------T----TCCC----TT-A-------TGG-G-----TATTT-T-G---GGCATGTAC-----------A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341589 80 +    662738 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------G---------CAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------CA----TTTG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCACGTAG-----------G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334554 78 -   1826925 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11748 54 +     19643 TG--G---AT--TAAG-AT-ACAA-----T-------T-T-A-TTT---AA-------------C---------CAG---------TATTTGT-----T---G---T--------------------------AT--GTT-----------CA----T-CA-AA------T----CCT-----------------------------------------------------------
i Loris_lydekkerianus.k141_2031736                       C 0 I 16
s Loris_tardigradus.ctg83                                  5045418 54 -   6120653 TG--G---AT--TAAG-AT-ACAA-----T-------T-T-A-TTT---AA-------------C---------CAG---------TATTTGT-----T---G---T--------------------------AT--GTT-----------CA----T-CA-AA------T----CCT-----------------------------------------------------------
i Loris_tardigradus.ctg83                                C 0 I 16
s Loxodonta_africana.GL010049.1                           39084616 23 +  43346337 --------------------------------------------------------------------------------------------------T---G---T--------------------------TT--ATG-----------CA----T-TC-AG------C----TCAG----TT-A--------------------------------------------------
i Loxodonta_africana.GL010049.1                          I 2473 I 15
s Lycaon_pictus.CM007581.1                                41615090 34 +  59628241 -------------------------------------------------------------------------------------------------------------------------------------------------------------C-TG-AA------C----TTTA----CT-A-------TGA-C-----TACTT-T-T---GTCATGAAG-----------A
i Lycaon_pictus.CM007581.1                               I 41 C 0
s Macaca_arctoides.k141_1757516                              45949 78 -     61512 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGAAG-----------A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373611 78 -  60120075 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGAAG-----------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25873 78 +     30207 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             711 78 -      5035 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25826 78 +     30527 AG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37002 78 -     50087 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46746 78 +     51645 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                415949 78 - 187317192 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400179 78 +  25927173 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49351 78 -     62418 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------T---------CAA---------CATTTGT-----C-------T--------------------------AT--ATG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1888 78 +     14901 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGAAG-----------A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45823 78 +     59329 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271731 78 +    668171 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   375 78 -      5049 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGAAG-----------A
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3529 78 +     17132 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--ATG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCCTGGAG-----------A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223606 79 -    270270 TA--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---GA-------------C---------CAA---------CATTAGT-----T---G---T--------------------------GT--GTA-----------CA----T-TA-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---ggcacatag-----------a
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323019 78 +  24302211 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357850 78 -    752769 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             673937 44 -    737560 tg--g---at--aAGG-GT-GCAG-----C-------T-T-AACtc---aa-------------c---------caa---------catttgt-----t------gt--------------------------gt--gta-------------------------------------------------------------------------------------------------
i Manis_javanica.JSZB01003497.1                          C 0 I 34
s Manis_pentadactyla.KN006162.1                             221233 44 +    317179 tg--g---at--aaaG-GT-GCAG-----T-------T-T-AACTC---AA-------------C---------Caa---------catttgt-----t------tt--------------------------gt--gta-------------------------------------------------------------------------------------------------
i Manis_pentadactyla.KN006162.1                          C 0 I 34
s Marmota_marmota.CZRN01000018.1                           7501449 79 +  40650429 TG--G---AT--AAAG-GT-GTAA-----T-------T-T-T-TTC---AA-------------C---------CAT---------CATTTGT-----T---G---T--------------------------AT--GTG-----------CA----A-TG-AA------T----TCCG----TG-A-------TGG-C-----TACTT-C-A---GGGaagcag-----------a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150781 79 +    207569 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---GA-------------C---------CAA---------CGTTTGT-----T---G---T--------------------------GT--GTG-----------CA----T-TG-AA------C----TCTG----GT-G-------TGA-C-----TACTT-T-T---GGCATGGAT-----------A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26650 35 -     74585 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTA----TT-A-------TTA-C-----TACTTTT-T---GTCATGTAG-----------A
i Mellivora_capensis.MelCap_flattened_line_19308         I 41 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50541 64 -    140813 TG--G---AT--AAAA-GT-GCAA-----T-------T-T-A-GCC---A--------------C---------TAG---------CAGCTGT-----T---G---A--------------------------GT----G-----------TA----T-TG-AT------T----TCCA----TT-A-------TGG-C-----TACTT----------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 57
s Mesocricetus_auratus.KB708134.1                         17429643 66 +  29670104 TG--G---AT--AAAA-GT-GCAA-----T-------T-T-A-GCT---A--------------C---------CAG---------CAGTTCT-----T---G---A--------------------------GT--GTC-----------CG----T-TG-AT------T----TTCA----TT-A-------TGG-C-----TATTT----------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 12
s Mesoplodon_bidens.MesBid_scaffold_6114                     87873 80 +     93471 TG--G---AT--AAAG-GT-GCTA-----T-------T-T-A-TTC---AA-------------G---------CAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------CA----TTTG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCATGTAG-----------A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10676 76 +     17804 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11176 76 -     12984 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19492 76 -     26561 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGC-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCCGGTAG-----------A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985240 79 +  93316391 TG--G---AT--AAAG-ga-gcaa-----t-------t-t-a-ttt---aa-------------c---------caa---------tatttGT-----T---G---T--------------------------AT--ATG-----------CA----T-GG-AA------T----CCAA----TT-A-------TGA-C-----TACTT-T-G---GGCACAGAG-----------A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46681 89 +    145209 --------------------------------------------------------------------------------------TGTACGC-----T------TTTTACTTTTTTGAAAa--ttgtggcaaat--gta-----------ta----t-gc-ag------caa-aacattttttg-a---------a-c-----caata-t-tcttctcgtgtacag---t-c-gat
i Microgale_talazaci.MicTal_scaffold_6613                I 52 I 482
s Micronycteris_hirsuta.MicHir_scaffold_2233                185469 34 +    200668 TA--G---AT--AAAG-GT-GAAG-----T-------T-T-A-TTC---CA-------------C---------CAA---------CATTTG-------------------------------------------------------------------------------------------------------------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 41
s Microtus_ochrogaster.CM001695.1                         15962845 71 +  27267610 TG--G---at--aaaa-gt-gctttttttt-------t-t-a-gcc---a--------------c---------TAG---------CAGTTGT-----T---G---A--------------------------GT--GTG-----------CA----T-TG-AT------T----TCCA----TT-A-------TGG-C-----TACTT----------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 12
s Miniopterus_natalensis.LDJU01000034.1                    6363621 79 -   8254450 CA--G---AT--AAAG-GT-GAAa-----t-------t-t-a-ttc---aa-------------c---------caa---------catttac-----c------gt--------------------------gg--gta-----------ca----t-ca-aa------t----tcta----tt-a-------tga-c-----tactt-t-t---ggcatgtag-----------a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42528 79 -     48117 AA--G---AT--AAAG-GT-Gaaa-----t-------t-t-a-ttc---aa-------------c---------caa---------catttac-----t------gt--------------------------gg--gta-----------ca----t-cg-aa------t----tcta----tt-a-------tga-c-----tactt-t-t---ggcatgtag-----------a
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23053 78 -     27822 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CATTTGT-----C-------C--------------------------GT--GTG-----------CA----T-TG-AA------T----TCCA----TT-C-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8939 34 +     27589 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GTCATGTAG-----------A
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 41 C 0
s Mirza_zaza.k141_766280                                     53023 79 -     62432 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T---G---T--------------------------AT--ATG-----------CA----T-TG-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-G---GGCACAGAG-----------A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   359978 80 +    437263 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------G---------CAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------CA----TATG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCACGTAG-----------A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179698 78 +    366855 CA--G---GT--AAAG-GT-GAAa-----t-------g-c-a-ttc---aa-------------c---------caa---------catttgt-----c------gt--------------------------gc--gtg-----------ca----t-ta-aa------c----tctg----tt-a-------tga-c-----gctt--t-t---gtcatgcag-----------a
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  25940 81 -     82753 TG--G---AT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C--------CCAA---------TACTTGT-----G---G---C--------------------------AT--ATG-----------CA----TTTA-AA------C----TATA----TT-A-------TGA-C-----TACTT-T-T---GGCAGATAG-----------A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   18937 23 -     63510 TG--G---AT--AAAG-GT-CCAA-----T-------T-T-A-TTC---A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 51
s Murina_feae.MurFea_scaffold_17764                          39598 80 +     47283 TA--G---AT--AAAG-GT-GAAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTCAT-----T---G---T--------------------------GG--ACA-----------CA----T-TG-AA------C----TCTA----TT-A-------TGA-C-----TACTTTT-T---GGCATGCAG-----------A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593565 63 + 120012414 TC--A---AT--AAAC-GT-GCAA-----T-------T-T-A-GCT---A--------------T---------TAG---------TAG---T-----T---G---A--------------------------GT--GAG-----------TA----C-TG-AT------T----TCTA----TT-A-------TGG-C-----TACAT----------------------------
i Mus_caroli.LT608237.1                                  C 0 I 12
s Mus_musculus.chr8                                       41687954 63 + 129401213 TC--A---AT--AAAC-AT-GCAA-----T-------T-T-A-GCT---A--------------T---------TAG---------TAG---T-----C---G---A--------------------------GT--GTG-----------TA----C-TG-AT------T----TCTA----TT-A-------TGG-C-----TACTT----------------------------
i Mus_musculus.chr8                                      C 0 I 12
s Mus_spretus.CM004101.1                                  39497248 63 + 130317789 TC--A---AT--AAAC-AT-GCAA-----T-------T-T-A-GCA---A--------------T---------TAG---------TAG---T-----C---G---A--------------------------GT--GTG-----------TA----C-TT-AT------T----TCTA----TT-A-------TGG-C-----TACTT----------------------------
i Mus_spretus.CM004101.1                                 C 0 I 12
s Muscardinus_avellanarius.MusAve_scaffold_12866             83933 76 -     86153 TG--A---AT--AAAG-AT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----T---G---T--------------------------GT--GTT-----------CA----T-TG-AA------T----TTCA----CC-G-------TGG-G-----TACTT-T-T---GGGATGT--------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355574 34 +  14710649 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTA----TT-A-------TTA-C-----TACTT-T-T---GTCATGTAG-----------A
i Mustela_putorius.JH418006.1                            I 41 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63531 36 +     67721 -------------------------------------------------------------------------------------------------------------------------------------------------------AT----T-CG-AG------T----TCCA----TT-A-------TTA-T-----TACTT-T-T---GACATATGG-----------A
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 28 C 0
s Myotis_brandtii.KE162005.1                               9793854 71 +  10118263 ---------------G-GT-Gaaa-----t-------t-t-a-ttc---aa-------------c---------caa---------cattcat-----t------gt--------------------------ag--gta-----------ca----t-tg-ta------g-----gta----tt-a-------tga-c-----tactttt-t---ggcatgtag-----------a
i Myotis_brandtii.KE162005.1                             I 3 C 0
s Myotis_davidii.KB100139.1                                4388017 80 +   6019432 TA--G---AT--AAAG-GT-Gaaa-----t-------t-t-a-ttc---aa-------------c---------caa---------cattcat-----t------gt--------------------------ag--gta-----------ca----t-tg-aa------c----tcta----tt-a-------tga-c-----tactttt-t---ggaatgtag-----------a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383813 72 +   4330536 ---------------G-GT-Gaaa-----t-------t-t-a-ttc---aa-------------c---------caa---------cattcat-----t------gt--------------------------ag--gta-----------ca----t-tg-aa------c----tcta----tt-a-------tga-c-----tactttt-t---ggcatgtag-----------a
i Myotis_lucifugus.GL429869.1                            I 3 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2622 72 +     18357 ---------------G-GT-GAAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTCAC-----T---G---T--------------------------AG--TTA-----------CA----T-TG-AA------C----TCTA----TT-A-------TGA-C-----TACTTTT-T---GGCACGTag-----------a
i Myotis_myotis.MyoMyo_scaffold_66571                    I 3 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120182 80 +    130748 TG--G---AT--AAAG-GT-CCAA-----C-------T-A-A-TTC---AA-------------T---------TGA---------CATTTGT-----C-A-----T--------------------------GT--GTG-----------CA----T-TGGAA------C----TATG----TT-A-------CGC-C-----TACTT-T-T---GACATGGAG-----------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946717 72 +   3037898 ttgtaaaaaa--aaaa-gt-acaa-----g-------t-t-A-GCC---AA-------------T---------CAA---------CAGTTGA-----T---G---C--------------------------AT--GTA-----------TA----T-GG-AT------T----TCCA----CT-A-------TGG-C-----TACTT----------------------------
i Nannospalax_galili.KL204047.1                          C 0 I 12
s Nasalis_larvatus.k141_1350636                              29702 78 +     34575 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232656 78 -   7148211 TG--G---AT--AAAG-GG-GCAA-----T-------T-T-A-TTC---GA-------------G---------CAA---------CATTCGT-----T---G---C--------------------------GT--GTG-----------CA----CGTG-AA------C----TC------TT-A-------TGA-C-----TCCTT-T-T---GGCACGTAG-----------A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128684 57 -    149072 -------------------------------------------------aa-------------c---------caa---------catttgt-----t------gt--------------------------gg--gta-----------ca----t-tg-aa------c----tcta----tt-t-------tgg-c-----tcttt-t-t---ggcttgtag-----------a
i Noctilio_leporinus.NocLep_scaffold_7894                I 18 C 0
s Nomascus_annamensis.k141_1771965                           54125 78 -    132029 TG--G---TT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CGTTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10220 78 -     16345 TG--G---TT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CGTTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16105 78 +     22201 TG--G---TT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CGTTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414326 78 -  22158432 TG--G---TT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CGTTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26503 78 -     54323 TG--G---TT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CGTTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198686 34 +   9404916 -------------------------------------------------------------------------------------------------------------------------------------------------------------C-TG-AA------C----ATTA----CT-A-------TGA-C-----TACTT-T-T---GTCATGAAG-----------A
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 41 C 0
s Nycticebus_bengalensis.LG01                             93638648 54 + 196305487 CA--G---AT--TAAG-AT-ACAA-----T-------T-T-A-TTT---AA-------------C---------CAG---------TATTTGT-----TC------T--------------------------AT--GTT-----------CA----T-CA-AA------T----CCT-----------------------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 I 16
s Nycticebus_coucang.k141_1296080                             1251 54 -      9413 CA--G---AT--TAAG-AT-ACAA-----T-------T-T-A-TTT---AA-------------C---------CAG---------TATTTGT-----TC------T--------------------------AT--GTT-----------CA----T-CA-AA------T----CCT-----------------------------------------------------------
i Nycticebus_coucang.k141_1296080                        C 0 I 16
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566028 54 - 199412804 CG--G---AT--TAAG-AT-ACAA-----T-------T-T-A-TTT---AA-------------C---------CAG---------TATTTGT-----TC------T--------------------------AT--GTT-----------CA----T-CA-AA------T----CCT-----------------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 16
s Ochotona_princeps.JH802162.1                             2557316 53 -   3988456 TG--G---TC--AAAG-GT-TCAA-----c-------t-t-a-ttc---ag-------------a----------aa---------tatttgt-----t------gTT-------------------------AT--GTG-----------TG----C-TG-AA------T----TC------------------------------------------------------------
i Ochotona_princeps.JH802162.1                           C 0 I 21
s Octodon_degus.JH651603.1                                11055487 36 -  11899542 -------------------------------------------------------------------------------------------------------------------------------------------------------AT----T-TG-AA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GAcatatgg-----------a
i Octodon_degus.JH651603.1                               I 28 C 0
s Odobenus_rosmarus.KB229312.1                             1452145 34 +   2017862 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------T----TCTA----TT-A-------TGA-C-----TACTT-T-T---GTCatgtag-----------a
i Odobenus_rosmarus.KB229312.1                           I 41 C 0
s Odocoileus_virginianus.KZ100018.1                         436708 81 -    630418 TG--G---AT--AAAT-GT-GCAA-----T-------T-T-A-TTC---AA-------------C--------CCAG---------TACTTGT-----G---G---C--------------------------AT--ATG-----------CA----TTTC-AA------C----TCTA----TT-A-------TGA-C-----TGCTT-T-T---GGCACATAG-----------A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14902 81 +    150152 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C--------CCAG---------TATTTGT-----G---G---C--------------------------AT--ATG-----------CC----TTTA-AA------C----TCTA----TT-A-------TGA-C-----TGCTT-T-T---GGCACATAG-----------A
i Okapia_johnstoni.LVCL01S0005463.1                      I 201 T 201
s Ondatra_zibethicus.OndZib_scaffold_7387                    93202 66 -    140218 TG--G---AT--AAAA-GT-GCTT-----T-------T-T-A-GCC---A--------------C---------TAG---------CAGTTGT-----T---G---A--------------------------GT--GTG-----------CA----T-TA-AT------T----TTCA----TT-A-------TGG-C-----TACTT----------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 12
s Onychomys_torridus.OnyTor_scaffold_28377                    4082 66 -     41509 TG--G---AT--ACAT-GT-GCCA-----T-------T-T-A-GCC---A--------------C---------TAG---------CAGTTGT-----T-A-----A--------------------------AT--GTG-----------TG----T-TG-AT------G----TCCA----TT-A-------TGG-C-----TACTT----------------------------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 12
s Orcinus_orca.KB316932.1                                  8103046 80 +  10937097 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------G---------CAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------CA----TATG-AA------C----TCTA----Tt-a-------tga-c-----tactt-t-t---tttttttag-----------a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_2034494               202 54 -       302 --------------------------------------------------------------------------CAA---------CATTTGT-----T-A-----T--------------------------GT--ATG-----------CA----T-TG-AA------C----TCTA----TT-A-------TGC-C-----TCCTT-T-T---GGCTTGTAG-----------A
i Orycteropus_afer.OryAfe_flattened_line_2034494         N 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104048 79 - 174332312 TG--G---TT--AAAG-GT-TCAG-----G-------T-T-A-TTC---AG-------------C---------TAG---------TAGTTGT-----T---G---T--------------------------AT--GTA-----------CA----T-CG-AA------T----TCCC----TT-A-------TGT-G-----TACTT-T-G---GGCATGTAC-----------A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39731 34 +    559221 -------------------------------------------------------------------------------------------------------------------------------------------------------------C-TG-AA------C----ATTA----CT-A-------TGA-C-----TACTT-T-T---GTCATGAAG-----------A
i Otocyon_megalotis.JAEUCK010005147.1                    I 41 C 0
s Otolemur_crassicaudatus.k141_649260                        41193 55 -     51505 TG--G---AT--AAAG-AT-AAAA-----T-------T-T-C-TTT---AA-------------C---------CAG---------TATTTGT-----T---G---T--------------------------AT--GTT-----------CA----T-CA-AA------T----CCTA----------------------------------------------------------
i Otolemur_crassicaudatus.k141_649260                    C 0 I 19
s Otolemur_garnettii.GL873799.1                             354197 55 +   1103335 Tg--g---at--aaag-at-aaaa-----t-------t-t-c-ttt---aa-------------c---------CAG---------TATTTGT-----T---G---T--------------------------AT--GTT-----------CA----T-CA-AA------T----CCTA----------------------------------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 I 19
s Ovis_aries.CM001607.2                                   26404612 81 -  44047080 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C--------CCAG---------TACTTGT-----G---G---C--------------------------GT--ATG-----------CA----TTTA-AA------C----TCTA----TT-A-------CGA-C-----TACTT-T-T---GGCACATAG-----------A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5131 81 +     17875 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C--------CCAG---------TACTTGT-----G---G---C--------------------------GT--ATG-----------CA----TTTA-AA------C----TCTA----TT-A-------CGA-C-----TACTT-T-T---GGCACATAG-----------A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473219 78 - 189151597 TG--G---TT--ATAG-TT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CTTTCGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24956 34 -    230217 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCAGGTAG-----------A
i Panthera_onca.PanOnc_flattened_line_3271               I 41 C 0
s Panthera_pardus.KV860321.1                              18462282 34 -  18783137 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCAGGTAG-----------A
i Panthera_pardus.KV860321.1                             I 41 C 0
s Panthera_tigris.KE722367.1                               3972941 34 +   8748460 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCAGGTAG-----------A
i Panthera_tigris.KE722367.1                             I 41 C 0
s Pantholops_hodgsonii.KE114653.1                          1616140 81 +   2937107 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C--------CCAG---------TACTTGT-----G---G---C--------------------------GT--ATG-----------CA----TTTA-AA------C----TCTA----TT-A-------CGA-C-----TACTT-T-T---GGCACATAG-----------A
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243851 78 - 183742232 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10313 78 +     21308 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292886 78 -  20919399 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  22961 78 -     27687 TG--G---TT--ATAA-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16107 78 +     16796 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22918 78 -     23640 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15554 34 +     78924 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-GA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCAGGTAG-----------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 41 C 0
s Perodicticus_ibeanus.k141_1921260                          27529 40 +     31479 TG--G---AT--AAAG-AT-ACAA-----T-------T-T-A-TTT---AA-------------C---------CAG---------TATTTAT-----T---G---T--------------------------AC------------------------------------------------------------------------------------------------------
i Perodicticus_ibeanus.k141_1921260                      C 0 I 28
s Perodicticus_potto.k141_1854441                            19898 40 -     24908 TG--G---AT--AAAG-AT-ACAA-----T-------T-T-A-TTT---AA-------------C---------CAG---------TATTTAT-----T---G---T--------------------------AC------------------------------------------------------------------------------------------------------
i Perodicticus_potto.k141_1854441                        C 0 I 28
s Perognathus_longimembris.PerPac_flattened_line_89005        2231 84 +      9367 CA--A---GC--A----AA-TCAA-----G-------T-T-A-ATT---AA-------------TTAATT-AATGAA---------CATTTGT-----T---G---T--------------------------AT--CTA-----------CA----T-TG-AT------T----TCCA----TT-G-------TGA-C-----TACTT-T-G---GGCATGTAG-----------A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 1
s Peromyscus_maniculatus.KI615324.1                         247279 68 +  18517816 TG--G---CT--AAAA-GT-GCCA-----T----T-TT-T-A-GCC---A--------------C---------TGG---------TAGTTGT-----T---G---A--------------------------AT--GTG-----------TG----T-TG-AT------G----TCCA----TT-A-------TGG-C-----TACTT----------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 12
s Petromus_typicus.PetTyp_scaffold_17301                     32407 37 -     56120 -------------------------------------------------------------------------------------------------------------------------------------------------------CT----T-TG-GA------T----TCCA----TT-A-------TGC-C-----TACTTTT-T---GGCATGTAA-----------A
i Petromus_typicus.PetTyp_scaffold_17301                 I 33 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4572 80 -     63832 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------G---------CAA---------CATTCGT-----T---G---C--------------------------GT--GTG-----------CA----CGTG-AA------C----TCTC----TT-A-------TGA-C-----TCCTT-T-T---GGCACGTAG-----------A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3162 49 +     55023 ---------------------------------------------------------------------------------------ATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Piliocolobus_badius.k141_2704958                       I 25 C 0
s Piliocolobus_gordonorum.k141_381342                         2700 49 -     89929 ---------------------------------------------------------------------------------------ATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Piliocolobus_gordonorum.k141_381342                    I 25 C 0
s Piliocolobus_kirkii.k141_1310104                            3290 49 +     40849 ---------------------------------------------------------------------------------------ATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Piliocolobus_kirkii.k141_1310104                       I 25 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  254964 49 +  14605196 ---------------------------------------------------------------------------------------ATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Piliocolobus_tephrosceles.PDMG02000141.1               I 25 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4434 80 +     22231 TA--G---AT--AAAG-GT-GAAA-----T-------T-T-A-TTC---AG-------------C---------CAA---------CATTCAT-----T---G---T--------------------------GG--GGA-----------CA----T-TG-AA------C----TCTA----TC-A-------TGA-C-----TACTTTT-T---GGCATGTAG-----------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65261 76 +    207309 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCG----TT-A-------TGA-T-----TACTT-T-T---GGCAGGAAG-----------A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6353 76 -     25401 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGAAA-----------A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32097 76 +     58159 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGAAG-----------A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32373 76 +     63561 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGAAG-----------A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32133 76 +     51148 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGAAG-----------A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557103 76 -   4542175 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGAAG-----------A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32117 76 +     51125 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGAAG-----------A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1570 99 +     19503 GG--G---TT--AAAG-GT-TTAA-----T-------T-T-A-TTC---AACAACATTCAACATT---------CAA---------CATTTAT-----TCAAGCAAC--------------------------AT--GTG-----------CA----TTTG-AA------C----TCTA----TT-A-------CGA-C-----TACTT-C-T---GGCACGTAG-----------A
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8528 76 +     39866 GG--G---T-----AG-GT-GCAT-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTAT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TAA-T-----TACTT-T-T---GGCAGGAAG-----------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3610 76 -      9282 GG--G---T-----AG-GT-TCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTAT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TAA-T-----TACTT-T-T---GGCAGGAAG-----------T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43014 76 -     87950 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTAT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TAA-T-----TACTT-T-T---GGCAGGAAG-----------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43410 76 -     88961 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTAT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TAA-T-----TACTT-T-T---GGCAGGAAG-----------T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8106 76 -     39403 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTAT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TAA-T-----TACTT-T-T---GGCAGGAAG-----------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43057 76 +     87928 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTAT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TAA-T-----TACTT-T-T---GGCAGGAAG-----------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8105 76 -     60166 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTAT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TAA-T-----TACTT-T-T---GGCAGGAAG-----------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15042 76 -     67232 GG--G---T-----AG-GT-GCAT-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTAT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TAA-T-----TACTT-T-T---GGCAGGAAG-----------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          42958 76 -     90634 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTAT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TAA-T-----TACTT-T-T---GGCAGGAAG-----------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44425 76 +     89403 GG--G---T-----AG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTAT-----T---G---T--------------------------AT--GTG-----------CA----T-TG-GA------T----TCCA----TT-A-------TAA-T-----TACTT-T-T---GGCAGGAAG-----------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178328 78 - 189387572 TG--G---TT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CGTTTGT-----C-------T--------------------------At--gtg-----------ca----t-tg-aa------t----tcca----tt-a-------tgA-C-----TACTT-T-T---GGCatggaa-----------a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193145 78 -   9816681 TG--G---TT--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CGTTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28282 78 +     69807 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-C-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45463 78 -     80239 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-C-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 1417 55 +      7663 -----------------------------------------------------------------------------------------------------------------------------------------gta-----------tt----t-gc-aa------c-acatcct----ct-a-------tcgttattaatattc-a-t---cacatgtacag--ttca-g-c
i Procavia_capensis.ProCapCap_scaffold_165387            I 82 I 2397
s Prolemur_simus.MPIZ01000396.1                            1983038 79 +   4620579 TG--G---AT--AAAA-Gt-gcaa-----t-------t-t-a-ttt---aa-------------c---------taa---------tatttGT-----T---G---T--------------------------AT--GTG-----------CA----T-GT-AA------T----CCCA----TT-A-------TGA-C-----TACTT-G-G---GACACAGAG-----------A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566549 78 -   2598838 TG--G---AT--AAAG-gt-gcaa-----t-------t-t-a-ttt---aa-------------c---------caa---------tatttgT-----T-A-----T--------------------------AT--GTG-----------CA----T-TG-AA------T-----CCA----TT-A-------TGA-C-----TACTT-T-G---GGCACAGAG-----------A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4187 78 -      7103 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T-A-----T--------------------------AT--GTG-----------CA----T-TG-AA------T-----CCA----TT-A-------TGA-C-----TACTT-T-G---GGCACAGAG-----------A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4784 78 -     11706 TG--G---AT--AAAG-GC-ACAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T-A-----T--------------------------AT--GTG-----------CA----T-TG-AA------T-----CCA----TT-A-------TGA-C-----TACTT-T-G---GGCACAGAG-----------T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8522 78 -     30655 TG--G---AT--AAAG-GC-ACAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T-A-----T--------------------------AT--GTG-----------CA----T-TG-AA------T-----CCA----TT-A-------TGA-C-----TACTT-T-G---GGCACAGAG-----------T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34835 78 +     46564 TG--G---AT--AAAG-GC-ACAA-----T-------T-T-A-TTT---AA-------------C---------CAG---------TATTTGT-----T-A-----T--------------------------AT--GTG-----------CA----T-TG-AA------T-----CCA----TT-A-------TGA-C-----TACTT-T-G---GGCACAGAG-----------T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95114 78 -     98465 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T-A-----T--------------------------AT--GTG-----------CA----T-TG-AA------T-----CCA----TT-A-------TGA-C-----TACTT-T-G---GGCACAGAG-----------A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8753 78 +     35169 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T-A-----T--------------------------AT--GTG-----------CA----T-TG-AA------T-----CCA----TT-A-------TGA-C-----TACTT-T-G---GGCACAGAG-----------A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37885 66 +     52041 TG--G---AT--AAAA-CT-GCAA-----T-------T-T-A-GCC---A--------------C---------TAG---------CAGCTGT-----T---G---A--------------------------GT--GTG-----------TA----T-TG-AT------T----TCCA----TT-A-------TGG-C-----TACTT----------------------------
i Psammomys_obesus.NESX01036366.1                        C 0 I 12
s Pteronotus_parnellii.KE847780.1                            52591 78 -     66298 CA--G---AT--AAAG-GT-GAca-----t-------t-t-a-ttc---aa-------------c---------caa---------catttgt-----t------gt--------------------------gg--gta-----------ca----t-tg-aa------c----tctg----tg-a-------tga-t-----gctt--t-t---gtcatgcag-----------a
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5147 34 -     18639 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTA----TT-A-------TTA-C-----TACTT-T-T---GTCATGTAG-----------A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 41 C 0
s Pteropus_alecto.KB030862.1                               5841179 79 -  28871421 ca--g---at--AAAG-GT-GCAA-----T-------T-T-C-TTT---GA-------------C---------CGA---------CATTAGT-----T---G---T--------------------------GT--GTA-----------CA----T-TA-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCacatag-----------a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537694 79 -   4952924 ca--g---at--AAAG-GT-GCAA-----T-------T-T-C-TTT---GA-------------C---------CGA---------CATTAGT-----T---G---T--------------------------GT--GTA-----------CA----T-TA-AA------C----TCTA----TC-A-------TGA-C-----TACTT-T-T---GGCacatag-----------a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099599 34 +  38429054 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTG----TT-A-------TGA-C-----TACTT-T-T---GGCAGGTAG-----------A
i Puma_concolor.QAVW01001104.1                           I 41 C 0
s Pygathrix_cinerea.k141_1153803                             27658 78 +     91421 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154142 78 -   7812017 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8515 78 +     72585 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53625 81 +     55069 TG--G---AT--AAAT-GT-GCAA-----T-------T-T-A-TTC---AA-------------C--------CCAG---------TACTTGT-----G---G---C--------------------------AT--ATG-----------CA----TTTC-AA------C----TCTA----TT-A-------TGA-C-----TGCTT-T-T---GGCACATAG-----------A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023170 63 -  90668790 TG--G---GT--AAAA-GT-GCAA-----T-------T-T-A-GCC---A--------------T---------TAG---------CAG---T-----T---G---A--------------------------GT--GTG-----------TA----C-TG-AT------T----TCTA----TT-A-------TGG-C-----TACTT----------------------------
i Rattus_norvegicus.chr16                                C 0 I 12
s Rhinolophus_sinicus.LVEH01000134.1                       2915159 79 +   3329780 TG--G---CT--AAAG-GT-ACAA-----T-------T-T-T-TTT---GA-------------C---------CAA---------CATTTGT-----T---G---T--------------------------GT--GTA-----------CG----T-TG-AA------T----TTTA----TT-G-------GAA-C-----TACAT-T-T---GGCatgtac-----------a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2236 78 +      7119 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122852 78 + 195417433 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237078 78 -   7961872 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75224 79 -    116970 CA--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---GA-------------C---------CGA---------CATTAGT-----T------TT--------------------------GT--ATA-----------CA----T-TA-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCACATAG-----------A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4417 76 +     27962 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4311 76 +      6077 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4401 76 +      5971 CG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4322 76 +      5932 CG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2664 76 -      4390 CG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392101 76 - 209938924 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4271 75 +      5979 CA--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-G-------T----TCCA----TT-A-------CGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                840 76 -     22275 TG--G---T-----AG-TT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8300 81 +     16473 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C--------CCAG---------TACTTGT-----G---G---T--------------------------GT--ATG-----------CA----TTTA-AA------C----TCTA----TT-A-------CGA-C-----TACTT-T-T---GGCACATAG-----------A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109436 76 + 121099817 CG--A---T-----AG-TT-GCGA-----T-------T-T-A-TTC---AA-------------C---------CCA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31003 76 -     47369 CG--A---T-----AG-TT-GCGA-----T-------T-T-A-TTC---AA-------------C---------CCA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31389 76 -     79414 CG--A---T-----AG-TT-GCGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTA-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28080 76 -     34454 CG--A---T-----AG-TT-GCGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTA-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15481 76 -     22428 CG--A---T-----AG-TT-GCGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTA-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30635 76 -     47109 CG--A---T-----AG-TT-GCGA-----T-------T-T-A-TTC---AA-------------C---------CCA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-TG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238681 76 +   5703754 CT--G---T-----AG-CT-GCGA-----T-------T-T-A-TTC---AA-------------A---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-CG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8271 76 +     21866 CT--G---T-----AG-CT-GCGA-----T-------T-T-A-TTC---AA-------------A---------CAA---------TGTTTGT-----T---G---T--------------------------CT--GTG-----------CG----T-CG-GA------T----TCCA----TT-A-------TGA-T-----TACTT-T-T---GGCAGGTAG-----------A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116340 24 +    313613 TA--G---GT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 41
s Semnopithecus_entellus.k141_158471                         25977 78 +     27374 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29489 78 +     58920 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           15987 78 -     45317 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23645 78 -     42441 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26323 78 -     29113 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29398 78 -     48123 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49656 72 +     77746 TG--G---GT--AAAA-G--GCCA-----CAAGCTCGA-G-A-GTC---A--------------T---------GAG---------CAGTTGT-----T---G---A--------------------------AT--ATG-----------TA----T-TG-AT------T----TCCA----TT-A-------TGA-C-----TACTT----------------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 12
s Solenodon_paradoxus.SolPar_flattened_line_126            1864617 32 -   1910179 TG--G---AT--AAAG-TT-GCAG-----T-------T-T-A-TTC---AA-------------C---------CAG---------CGTT---------------------------------------------------------------------------------------------------------------------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 26
s Sorex_araneus.JH798187.1                                 4671726 34 +  18376816 TG--G---AT--AGAG-GG-ACAA-----T-------T-T-A-TCC---AT-------------C---------CAG---------CATTTA-------------------------------------------------------------------------------------------------------------------------------------------------
i Sorex_araneus.JH798187.1                               C 0 I 40
s Spermophilus_dauricus.KZ294078.1                         1868809 79 +   3870691 TG--G---AT--AAAG-GT-GTAA-----T-------T-T-T-TTC---AA-------------C---------CAT---------CATTTGT-----T---G---T--------------------------AT--GTG-----------CA----A-TG-AA------T----TCTG----TG-A-------TGG-C-----TACTT-C-G---GGGaagcag-----------a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7231 34 -     97271 -------------------------------------------------------------------------------------------------------------------------------------------------------------T-TG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GTCATGTAG-----------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 41 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125337 23 +    196729 TG--G---AT--AAAG-GT-CCAA-----T-------T-T-A-TTC---A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 51
s Sus_scrofa.CM000828.4                                    6644206 80 +  69701581 TG--G---AT--AAAG-GC-GCAA-----T-------T-T-A-GTC---AA-------------C---------CAG---------CATTTGT-----T---G---C--------------------------AT--GTG-----------CA----TTTG-AA------C----TCTG----TT-A-------TGA-C-----TACTT-T-T---GGCAtgtag-----------a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391585 78 +   1523678 TG--G---TC--ATAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------C---------CAG---------CGTTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14756 79 +     22964 TA--G---AT--AAAG-CT-Gaaa-----t-------t-t-a-ttc---aa-------------c---------caa---------catttgt-----t------gt--------------------------gg--gta-----------ca----t-tg-aa------c----tcta----ct-a-------tga-c-----tactt-t-g---ggcatgtag-----------a
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3173 80 +      5583 TG--G---AT--AAAG-GT-CCAA-----C-------T-A-A-TTC---AA-------------T---------CGA---------CATTTGT-----C-A-----T--------------------------GT--GTA-----------CA----T-TGGAA------C----TATG----TT-A-------CAC-C-----TACTT-T-T---GACATGGAG-----------A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192096 42 +    199430 ----------------------------------------------------------------------------------------------------------T--------------------------GC--GTA-----------CA----T-TG-AA------C----TCTA----GT-G-------TGA-C-----TACTT-T-T---GGCATGTAG-----------A
i Tapirus_indicus.TapInd_scaffold_7432                   I 34 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106066 42 -    539355 ----------------------------------------------------------------------------------------------------------T--------------------------GC--GTA-----------CA----T-TG-AA------C----TCTA----GT-G-------TGA-C-----TACTT-T-T---GGCATGTAG-----------A
i Tapirus_terrestris.TapTer_scaffold_755                 I 34 C 0
s Tarsius_lariang.k141_1733899                                1096 79 +      9917 TC--A---AT--CAAG-GA-GCAA-----G-------T-C-A-TTC---AG-------------C---------CAA---------TATTTGT-----T---G---C--------------------------AT--GTG-----------CA----C-TG-AA------T----TTTA----TT-A-------TGA-C-----TACTT-T-T---GAAATGTGA-----------A
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7894 79 +     20590 TC--A---AT--CAAG-GA-GCAA-----G-------T-C-A-TTC---AG-------------C---------CAA---------TATTTGT-----T---G---C--------------------------AT--GTG-----------CA----C-TG-AA------T----TTTA----TT-A-------TGA-C-----TACTT-T-T---GAAATGTGA-----------A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353837 78 - 186847797 TG--G---TT--ATAG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATGGAG-----------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24566 37 -     33621 -------------------------------------------------------------------------------------------------------------------------------------------------------CT----T-TG-GA------T----TCCA----TT-A-------TGC-C-----TTCTTTT-T---GGCATGTAA-----------A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 33 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20177 79 -     31044 CG--G---GT--AAAG-GA-GCAA-----T-------T-T-A-TTG---TA-------------C---------CAC---------CGTTTGT-----T---G---T--------------------------GT--ATG-----------CA----T-TG-AA------C----TATG----TT-A-------TGC-C-----TACTT-T-T---GACATAGAA-----------A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480584 78 -    610378 TA--G---AC--AGAG-GC-GAAG-----T-------T-T-A-TTC---AA-------------C---------CGA---------CATTTGT-----T---G---T--------------------------TG--GTA-----------CA----C-TG-AA------C----CCTG----TG-A-------TGA-C-----ACTT--C-T---GTCACGCAG-----------A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21522 78 +     26378 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34198 78 -     78344 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20847 78 +     25722 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29154 78 -     62838 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29198 78 +     46913 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10007 78 -     28527 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31089 78 -     64340 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29127 78 -     63452 TG--G---TT--ATCA-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10574 78 +     22490 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         3997 78 -      6147 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------AAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10910 78 -     13050 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256140 78 -   6242583 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2168 78 +     19340 TG--G---TT--ATCG-GT-GTGA-----T-------T-T-A-TTC---AA-------------C---------CAA---------CATTTGT-----C-------T--------------------------AT--GTG-----------CA----T-TG-AA------T----TCCA----TT-A-------TGA-C-----TACTT-T-T---GGCATAGAG-----------A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173913 81 -    200418 TG--G---AT--AAAG-GTGGCAA-----T-------T-T-A-TTC---AA-------------C---------CAC---------CATTTGT-----G---G---C--------------------------CT--CTG-----------CA----TTTA-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-G---GGCACATAG-----------A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6481376 44 -  10818551 --------------------------------------------------------------------------------------------------T---G---T--------------------------GT--GTG-----------CA----C-TG-AA------C----TCTG----TT-A-------TGC-C-----TACTT-T-T---GGCATGAAG-----------A
i Trichechus_manatus.JH594705.1                          I 413 C 0
s Tupaia_chinensis.KB320699.1                              1834870 42 -   4065304 ----------------------------------------------------------------------------------------------------------C--------------------------AT--GCG-----------CA----T-TG-AA------T----TCTA----TT-A-------TGA-C-----TACTT-T-G---GGTAAGGAA-----------A
i Tupaia_chinensis.KB320699.1                            I 33 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8887 42 -     70247 ----------------------------------------------------------------------------------------------------------C--------------------------AT--GTG-----------CA----T-TG-AA------T----TCTA----TT-A-------TGA-C-----TACTT-T-G---GGTAAGGAA-----------A
i Tupaia_tana.TupTan_flattened_line_394                  I 33 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366159 80 -  33153633 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------G---------TAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------CA----TATG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCACGTAG-----------A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4109 23 -     21056 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-A-------TGA-C-----TGCTC-T-T---GGCATTTAG-----------A
i Uropsilus_gracilis.UroGra_scaffold_46687               I 42 C 0
s Ursus_maritimus.KK499267.1                                182322 24 +   5085361 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-A-------TGC-C-----TACTT-T-T---GTCATGTAG-----------a
i Ursus_maritimus.KK499267.1                             I 46 C 0
s Varecia_rubra.k141_787544                                  25690 79 -     30710 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-G---GACACAGAG-----------A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24597 79 -    147434 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTT---AA-------------C---------CAA---------TATTTGT-----T---G---T--------------------------AT--GTG-----------CA----T-GG-AA------T----CCCA----TT-A-------TGA-C-----TACTT-T-G---GACACAGAG-----------A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76745 80 +   5488506 TG--G---AT--GAAG-GT-GCAG-----T-------T-T-A-TTC---AA-------------G---------CAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------CA----TTTG-AA------C----TCTA----TT-A-------TGA-C-----TACTT-T-T---GGCATGTAG-----------A
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_12041                105452 34 -    112863 -------------------------------------------------------------------------------------------------------------------------------------------------------------C-TG-AA------C----ATTA----CT-A-------TGA-C-----TACTT-T-T---GTCATGAAG-----------A
i Vulpes_lagopus.VulLag_flattened_line_12041             I 41 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174605 79 -    224448 TG--G---AT--AAAG-GC-GCAC-----T-------T-T-T-TTC---AA-------------C---------CAA---------CGTTTGT-----T---G---T--------------------------AT--GTG-----------CA----A-TG-AA------T----TCTG----GG-A-------TGG-C-----TACTT-T-G---GGGAAGTAG-----------A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29353 34 -     86975 -------------------------------------------------------------------------------------------------------------------------------------------------------------t-tg-aa------c----tcta----tt-a-------tga-c-----tactt-t-t---gtcatgtag-----------a
i Zalophus_californianus.ZalCal_flattened_line_17732     I 41 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       432 77 -      1899 ----G---AT--AAAA-GT-ATAG-----T-------G-T-A-GTC---AG-------------C---------CAA---------CATTTGT-----TC------C--------------------------AT--GCA-----------TA----C-TG-AT------T----TGCA----TT-A-------TGG-C-----TACTT-T-T---GGCATATTG-----------A
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1448 55 +      2126 TG--G---AT--AAAG-GT-GCAA-----T-------T-T-A-TTC---AA-------------G---------CAA---------CATTTGT-----T---G---C--------------------------AT--GTG-----------CA----TTTG-AA------C----TCT-----------------------------------------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 I 20
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5953 2 +     36723 CA
s Acinonyx_jubatus.LLWD01001279.1                           813375 1 +   1699592 G-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_21377                     25625 1 +     63021 A-
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 12 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415832 1 +  29979442 a-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 1
s Ailurus_fulgens.LNAC01001112.1                            216174 1 +    347723 a-
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allactaga_bullata.AllBul_scaffold_20030                    18561 1 -     61208 A-
i Allactaga_bullata.AllBul_scaffold_20030                I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48591 2 +     53615 CA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           622 2 +     13857 CA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17173 2 -     21945 CA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18858 2 +     32033 CA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72699 2 -     84148 CA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44938 2 -     78289 CA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44377 2 +     55831 CA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42827 2 -     64179 CA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24461 2 -     24835 CA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41452 2 +     45454 CA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47101 2 +     70886 CA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9274 2 +     30854 CA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33408 2 +     42133 CA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585826 1 +   2318259 G-
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      177625 1 -    412891 g-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_21030             50933 1 -     68529 A-
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 1
s Aotus_azarae.k141_887050                                    1665 2 +     17741 CA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2290 2 -     15923 CA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672572 2 +   5030052 CA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2566 2 -     16391 CA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2125 2 -     17186 CA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16638 1 -     32367 G-
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20757 1 -     45910 T-
i Arctocebus_calabarensis.k141_1364444                   I 19 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5891 1 -     15198 G-
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 1
s Ateles_geoffroyi_b.tarseq_1536                               275162 2 +  21539123 CA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11330 2 +     48076 CA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6465 2 -     28759 CA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34019 2 +     44353 CA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49390 2 -     71267 CA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23448 2 -     33135 CA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963975 1 -  23207421 G-
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 1
s Balaenoptera_bonaerensis.DF411050.1                          475 1 -     25979 G-
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_7278                     86834 1 +    124022 G-
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 1
s Bison_bison.KN261452.1                                     22376 1 +    288883 g-
i Bison_bison.KN261452.1                                 C 0 I 1
s Bos_indicus.CM003047.1                                  20356766 1 +  48749331 g-
i Bos_indicus.CM003047.1                                 C 0 I 1
s Bos_mutus.JH880303.1                                      755330 1 +   1948126 g-
i Bos_mutus.JH880303.1                                   C 0 I 1
s Bos_taurus.CM000203.6                                   27545472 1 -  45695690 g-
i Bos_taurus.CM000203.6                                  C 0 I 1
s Bubalus_bubalis.KI419123.1                               1530487 1 -   4408762 G-
i Bubalus_bubalis.KI419123.1                             C 0 I 1
s Cacajao_ayresi.k141_96119                                   8339 1 +     28062 C-
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43633 1 -     91139 C-
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21159 1 +     95584 C-
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21072 1 +    119600 C-
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10645 2 +     18648 CA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10180 2 -     13885 CA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2250 2 -      8861 CA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454642 2 + 189096842 CA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2165 2 +      8664 CA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42505855 1 +  60362399 A-
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9491 1 -     23171 A-
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                          222834 1 +   9314153 A-
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            41615969 1 +  59632846 A-
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            45107550 1 -  63665305 A-
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Capra_aegagrus.CM003241.1                               27409555 1 -  46296322 G-
i Capra_aegagrus.CM003241.1                              C 0 I 1
s Capra_hircus.CM004588.1                                 26591829 1 +  44709034 G-
i Capra_hircus.CM004588.1                                C 0 I 1
s Carlito_syrichta.NW_007259797.1                           270942 2 +    496798 TA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                747 1 +      9923 G-
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 1
s Castor_canadensis.CasCan_scaffold_39952                    28147 1 -     39886 A-
i Castor_canadensis.CasCan_scaffold_39952                I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80029 1 -    217609 G-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 1
s Cavia_aperea.AVPZ01000300.1                              4996880 1 +  23392119 G-
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000321 1 +  23407841 G-
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63402 1 -     66877 G-
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5563 2 -     12580 CA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43620 2 +     53515 CA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373383 2 -  26074798 CA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8437 2 -     34880 CA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67533 2 -     89041 CA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2902 2 -      5494 TA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492662 1 -  27778364 G-
i Ceratotherium_simum.JH767749.1                         C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19495 1 +     27315 G-
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 1
s Cercocebus_atys.KQ010504.1                                141747 2 -   4669795 CA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45490 2 +     47900 CA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            919 2 -     14410 CA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45303 2 -    148725 CA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27505 2 -     40656 CA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7469 2 +     20796 CA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12587 2 -     17524 CA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28312 2 -     34525 CA
i Cercopithecus_hamlyni.k141_566925                      I 20 C 0
s Cercopithecus_lowei.k141_2101310                           12090 2 -     25376 CA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364684 2 -  39242232 CA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270404 2 +  21565898 CA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32772 2 -     45857 CA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27673 2 -     32606 CA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3835 2 +      8499 CA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26231 2 +     70610 CA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23192 2 +     36323 CA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13164 1 -     19938 T-
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 1
s Cheracebus_lucifer.k141_2312002                             9439 1 -     32913 C-
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19852 1 -     40346 C-
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20107 1 +    216457 C-
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19900 1 +     39636 C-
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239233 1 -   2543920 G-
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4495 1 +      5346 C-
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42970 1 -    112038 C-
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8541 1 +     34062 C-
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344093 2 +  18827391 CA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10637 2 -     44032 CA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305418 2 - 135778131 CA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15293 1 +     15858 G-
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 1
s Choloepus_hoffmanni.KN194906.1                            606868 1 -    839153 g-
i Choloepus_hoffmanni.KN194906.1                         C 0 I 1
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1983 1 +      2406 t-
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          I 616 I 1
s Colobus_angolensis.KN981557.1                             409823 2 -   2368649 CA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379704 2 - 200372422 CA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3261 2 -     84244 CA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807701 1 +  53390261 g-
i Condylura_cristata.JH655891.1                          I 31 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3255 1 -      8242 g-
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 12 I 1
s Cricetomys_gambianus.CriGam_scaffold_14425                 44761 1 -     83289 A-
i Cricetomys_gambianus.CriGam_scaffold_14425             I 12 C 0
s Cricetulus_griseus.LT883664.1                          213115337 1 - 224834208 A-
i Cricetulus_griseus.LT883664.1                          I 12 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9868 1 +     12657 G-
i Crocidura_indochinensis.CroInd_scaffold_77846          I 45 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4828 1 +     87169 G-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_65                    645463 1 -   1526836 g-
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 416
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18785 1 +     50838 G-
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 34 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4797 1 +     36344 G-
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28573 1 +     75252 G-
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110518 1 -   2246927 t-
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Delphinapterus_leucas.KZ290073.1                        18632383 1 -  35494412 G-
i Delphinapterus_leucas.KZ290073.1                       C 0 I 1
s Desmodus_rotundus.KZ672366.1                              330942 1 -   2620052 G-
i Desmodus_rotundus.KZ672366.1                           C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664946 1 -   1390856 G-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                  139739 1 -    198055 G-
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 1
s Dinomys_branickii.DinBra_scaffold_10381                    99321 1 -    115145 A-
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950963 1 -  37912305 A-
i Dipodomys_ordii.KN672350.1                             I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5889 1 -     10735 A-
i Dipodomys_stephensi.DipSte_scaffold_89095              I 1 C 0
s Echinops_telfairi.JH980293.1                            62856017 1 - 111700974 T-
i Echinops_telfairi.JH980293.1                           I 511 T 510
s Eidolon_helvum.AWHC01266696.1                               6718 1 +     19438 g-
i Eidolon_helvum.AWHC01266696.1                          C 0 I 1
s Elaphurus_davidianus.JRFZ01104969.1                       240196 1 -    607251 G-
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 1
s Elephantulus_edwardii.JH947257.1                         1226161 1 +  10337057 g-
i Elephantulus_edwardii.JH947257.1                       C 0 I 4
s Ellobius_lutescens.LOEQ01008920.1                          31483 1 +    110024 a-
i Ellobius_lutescens.LOEQ01008920.1                      I 12 C 0
s Ellobius_talpinus.LOJH01026522.1                           13454 1 +     18970 a-
i Ellobius_talpinus.LOJH01026522.1                       I 12 C 0
s Enhydra_lutris.KZ291758.1                               24916586 1 +  41312741 A-
i Enhydra_lutris.KZ291758.1                              C 0 I 1
s Eptesicus_fuscus.JH977646.1                             12579365 1 +  14770903 g-
i Eptesicus_fuscus.JH977646.1                            C 0 I 1
s Equus_asinus.JREZ01000139.1                              3041860 1 -   4378816 G-
i Equus_asinus.JREZ01000139.1                            C 0 I 1
s Equus_caballus.CM000403.2                               21375798 1 +  39960074 G-
i Equus_caballus.CM000403.2                              C 0 I 1
s Equus_przewalskii.ATBW01110277.1                            1179 1 -      1194 G-
i Equus_przewalskii.ATBW01110277.1                       I 79 I 1
s Erinaceus_europaeus.JH835339.1                           3666524 1 +   7059049 t-
i Erinaceus_europaeus.JH835339.1                         I 46 I 1
s Erythrocebus_patas.Contig38                               263631 2 +  21539334 CA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71592 1 -    133382 G-
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_247202             1136 1 -      1170 G-
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 I 1
s Felis_catus.CM001381.2                                 186247284 1 - 206538554 G-
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                          185117070 1 - 205367284 G-
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_31944                 28167 1 -     30238 G-
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 1
s Fukomys_damarensis.KN121974.1                            2916878 1 -   3816255 a-
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126121 1 -    137831 T-
i Galago_moholi.ctg3793                                  I 19 C 0
s Galago_senegalensis.k141_991736                             9666 1 +     22493 T-
i Galago_senegalensis.k141_991736                        I 19 C 0
s Galagoides_demidoff.k141_561628                            21737 1 -     32986 T-
i Galagoides_demidoff.k141_561628                        I 19 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1616 1 -     28519 G-
i Galeopterus_variegatus.GalVar_scaffold_51812           I 16 I 1
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91899 1 -     95226 G-
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 1
s Gorilla_beringei.k141_3358147                               6253 2 -      8343 CA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255268 2 - 186649187 CA
i Gorilla_gorilla.LT578341.1                             I 78 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31260 1 -    327341 a-
i Helogale_parvula.HelPar_flattened_line_2585            I 11 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9573 1 +     48891 G-
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 1
s Heterocephalus_glaber.JH602082.1                         1932855 1 -  22651954 G-
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                3967 1 +      4291 G-
i Heterohyrax_brucei.HetBruBak_scaffold_154059           I 2320 T 2319
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8084 1 -     36432 G-
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 1
s Hipposideros_armiger.JXIK01000431.1                      1552076 1 -   1711038 g-
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_164997               1514 1 -      2730 G-
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 1
s Hoolock_leuconedys.ctg274                                    143277 2 -    630532 CA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70425 1 +     83186 G-
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72317 1 +    143317 G-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6311 2 +     12352 CA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13495 2 +     55766 CA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053095 2 + 191637585 CA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801973 2 +  11177569 CA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7602 1 -    135385 G-
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387310 1 +   7955117 g-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10484 1 -     16823 G-
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 1
s Jaculus_jaculus.JH725527.1                               1240340 1 +   9596543 A-
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72327 1 -     97402 G-
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 1
s Lagothrix_lagothricha.k141_246028                          43715 2 +    110728 CA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63337 1 -     65777 g-
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 1
s Leontopithecus_chrysomelas.k141_1327670                    10585 2 -     11567 CA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11966 2 -     12945 CA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813962 1 -   3914936 A-
i Leptonychotes_weddellii.KB714746.1                     C 0 I 1
s Lepus_americanus.LepAme_scaffold_56121                     18333 1 +     24238 G-
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 1
s Lipotes_vexillifer.KE559953.1                             341669 1 +    662738 G-
i Lipotes_vexillifer.KE559953.1                          C 0 I 1
s Lophocebus_aterrimus.ctg367                               334632 2 -   1826925 CA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11818 1 +     19643 T-
i Loris_lydekkerianus.k141_2031736                       I 16 C 0
s Loris_tardigradus.ctg83                                  5045488 1 -   6120653 T-
i Loris_tardigradus.ctg83                                I 16 C 0
s Loxodonta_africana.GL010049.1                           39084654 1 +  43346337 g-
i Loxodonta_africana.GL010049.1                          I 15 T 2368
s Lycaon_pictus.CM007581.1                                41615124 1 +  59628241 A-
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_1757516                              46027 2 -     61512 CA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373689 2 -  60120075 CA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25951 2 +     30207 CA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             789 2 -      5035 CA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25904 2 +     30527 CA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37080 2 -     50087 CA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46824 2 +     51645 CA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416027 2 - 187317192 CA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400257 2 +  25927173 CA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49429 2 -     62418 CA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1966 2 +     14901 CA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45901 2 +     59329 CA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271809 2 +    668171 CA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   453 2 -      5049 CA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3607 2 +     17132 CA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223685 1 -    270270 g-
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 1
s Mandrillus_leucophaeus.scaffold280                        323097 2 +  24302211 CA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357928 2 -    752769 CA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674015 1 -    737560 g-
i Manis_javanica.JSZB01003497.1                          I 34 I 1
s Manis_pentadactyla.KN006162.1                             221311 1 +    317179 g-
i Manis_pentadactyla.KN006162.1                          I 34 I 1
s Marmota_marmota.CZRN01000018.1                           7501528 1 +  40650429 g-
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150860 1 +    207569 G-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_19308             26685 1 -     74585 A-
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 50662 1 -    140813 A-
i Meriones_unguiculatus.MerUng_scaffold_7390             I 57 C 0
s Mesocricetus_auratus.KB708134.1                         17429721 1 +  29670104 A-
i Mesocricetus_auratus.KB708134.1                        I 12 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87953 1 +     93471 G-
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 1
s Mico_argentatus.k141_582562                                10752 2 +     17804 CA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11252 2 -     12984 CA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19568 2 -     26561 CA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47252 1 +    145209 T-
i Microgale_talazaci.MicTal_scaffold_6613                I 482 T 481
s Micronycteris_hirsuta.MicHir_scaffold_2233                185544 1 +    200668 G-
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 41 I 1
s Microtus_ochrogaster.CM001695.1                         15962928 1 +  27267610 a-
i Microtus_ochrogaster.CM001695.1                        I 12 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363700 1 -   8254450 g-
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_23309             42607 1 -     48117 g-
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 1
s Miopithecus_ogouensis.k141_1534655                         23131 2 -     27822 CA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8973 1 +     27589 A-
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_103                   360058 1 +    437263 G-
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179776 1 +    366855 g-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_13123                  26021 1 -     82753 G-
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 1
s Mungos_mungo.MunMun_flattened_line_18455                   19011 1 -     63510 A-
i Mungos_mungo.MunMun_flattened_line_18455               I 51 I 1
s Murina_feae.MurFea_scaffold_17764                          39678 1 +     47283 G-
i Murina_feae.MurFea_scaffold_17764                      C 0 I 1
s Mus_caroli.LT608237.1                                   35593640 1 + 120012414 a-
i Mus_caroli.LT608237.1                                  I 12 C 0
s Mus_musculus.chr8                                       41688029 1 + 129401213 A-
i Mus_musculus.chr8                                      I 12 C 0
s Mus_spretus.CM004101.1                                  39497323 1 + 130317789 a-
i Mus_spretus.CM004101.1                                 I 12 C 0
s Mustela_putorius.JH418006.1                             14355608 1 +  14710649 A-
i Mustela_putorius.JH418006.1                            C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_15261                     63567 1 +     67721 G-
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793925 1 +  10118263 g-
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                4388097 1 +   6019432 g-
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                               383885 1 +   4330536 g-
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_66571                         2694 1 +     18357 g-
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120262 1 +    130748 G-
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 1
s Nannospalax_galili.KL204047.1                             946801 1 +   3037898 a-
i Nannospalax_galili.KL204047.1                          I 12 C 0
s Nasalis_larvatus.k141_1350636                              29780 2 +     34575 CA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232734 1 -   7148211 G-
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_7894                   128741 1 -    149072 g-
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 1
s Nomascus_annamensis.k141_1771965                           54203 2 -    132029 CA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10298 2 -     16345 CA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16183 2 +     22201 CA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414404 2 -  22158432 CA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26581 2 -     54323 CA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198720 1 +   9404916 A-
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Nycticebus_bengalensis.LG01                             93638718 1 + 196305487 T-
i Nycticebus_bengalensis.LG01                            I 16 C 0
s Nycticebus_coucang.k141_1296080                             1321 1 -      9413 T-
i Nycticebus_coucang.k141_1296080                        I 16 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566098 1 - 199412804 T-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 16 C 0
s Ochotona_princeps.JH802162.1                             2557390 1 -   3988456 G-
i Ochotona_princeps.JH802162.1                           I 21 I 1
s Octodon_degus.JH651603.1                                11055523 1 -  11899542 g-
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452179 1 +   2017862 a-
i Odobenus_rosmarus.KB229312.1                           C 0 I 1
s Odocoileus_virginianus.KZ100018.1                         436789 1 -    630418 G-
i Odocoileus_virginianus.KZ100018.1                      C 0 I 1
s Okapia_johnstoni.LVCL01S0005463.1                          14782 1 +    150152 G-
i Okapia_johnstoni.LVCL01S0005463.1                      T 201 I 1
s Ondatra_zibethicus.OndZib_scaffold_7387                    93280 1 -    140218 A-
i Ondatra_zibethicus.OndZib_scaffold_7387                I 12 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4160 1 -     41509 T-
i Onychomys_torridus.OnyTor_scaffold_28377               I 12 C 0
s Orcinus_orca.KB316932.1                                  8103126 1 +  10937097 g-
i Orcinus_orca.KB316932.1                                C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_2034494               256 1 -       302 G-
i Orycteropus_afer.OryAfe_flattened_line_2034494         C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                       107104127 1 - 174332312 G-
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                        39765 1 +    559221 A-
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_649260                        41267 1 -     51505 T-
i Otolemur_crassicaudatus.k141_649260                    I 19 C 0
s Otolemur_garnettii.GL873799.1                             354271 1 +   1103335 T-
i Otolemur_garnettii.GL873799.1                          I 19 C 0
s Ovis_aries.CM001607.2                                   26404693 1 -  44047080 G-
i Ovis_aries.CM001607.2                                  C 0 I 1
s Ovis_canadensis.OviCan_scaffold_67953                       5212 1 +     17875 G-
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 1
s Pan_troglodytes.CM009242.2                               1473297 2 - 189151597 CA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24990 1 -    230217 G-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1
s Panthera_pardus.KV860321.1                              18462316 1 -  18783137 A-
i Panthera_pardus.KV860321.1                             C 0 I 1
s Panthera_tigris.KE722367.1                               3972975 1 +   8748460 G-
i Panthera_tigris.KE722367.1                             C 0 I 1
s Pantholops_hodgsonii.KE114653.1                          1616221 1 +   2937107 G-
i Pantholops_hodgsonii.KE114653.1                        C 0 I 1
s Papio_anubis.CM001495.2                                   243929 2 - 183742232 CA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10391 2 +     21308 CA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292964 2 -  20919399 CA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23039 2 -     27687 CA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16185 2 +     16796 CA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22996 2 -     23640 CA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15588 1 +     78924 A-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1
s Perodicticus_ibeanus.k141_1921260                          27597 1 +     31479 T-
i Perodicticus_ibeanus.k141_1921260                      I 28 C 0
s Perodicticus_potto.k141_1854441                            19966 1 -     24908 T-
i Perodicticus_potto.k141_1854441                        I 28 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2316 1 +      9367 G-
i Perognathus_longimembris.PerPac_flattened_line_89005   I 1 C 0
s Peromyscus_maniculatus.KI615324.1                         247359 1 +  18517816 C-
i Peromyscus_maniculatus.KI615324.1                      I 12 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32444 1 -     56120 G-
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4652 1 -     63832 G-
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 1
s Piliocolobus_badius.k141_2704958                            3211 2 +     55023 CA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2749 2 -     89929 CA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3339 2 +     40849 CA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255013 2 +  14605196 CA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4514 1 +     22231 G-
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 1
s Pithecia_albicans.k141_1239476                             65337 1 +    207309 C-
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6429 1 -     25401 C-
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32173 1 +     58159 C-
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32449 1 +     63561 C-
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32209 1 +     51148 C-
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557179 1 -   4542175 C-
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32193 1 +     51125 C-
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1669 1 +     19503 G-
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 1
s Plecturocebus_bernhardi.k141_2549090                        8604 1 +     39866 C-
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3686 1 -      9282 C-
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43090 1 -     87950 C-
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43486 1 -     88961 C-
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8182 1 -     39403 C-
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43133 1 +     87928 C-
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8181 1 -     60166 C-
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15118 1 -     67232 C-
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43034 1 -     90634 C-
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44501 1 +     89403 C-
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178406 2 - 189387572 ca
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193223 2 -   9816681 CA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28360 2 +     69807 CA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45541 2 -     80239 CA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 3869 1 +      7663 G-
i Procavia_capensis.ProCapCap_scaffold_165387            I 2397 T 2396
s Psammomys_obesus.NESX01036366.1                            37963 1 +     52041 A-
i Psammomys_obesus.NESX01036366.1                        I 12 C 0
s Pteronotus_parnellii.KE847780.1                            52669 1 -     66298 g-
i Pteronotus_parnellii.KE847780.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5181 1 -     18639 A-
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 1
s Pteropus_alecto.KB030862.1                               5841258 1 -  28871421 g-
i Pteropus_alecto.KB030862.1                             C 0 I 1
s Pteropus_vampyrus.KN525825.1                             3537773 1 -   4952924 g-
i Pteropus_vampyrus.KN525825.1                           C 0 I 1
s Puma_concolor.QAVW01001104.1                            18099633 1 +  38429054 G-
i Puma_concolor.QAVW01001104.1                           C 0 I 1
s Pygathrix_cinerea.k141_1153803                             27736 2 +     91421 CA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154220 2 -   7812017 CA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8593 2 +     72585 CA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53706 1 +     55069 G-
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 1
s Rattus_norvegicus.chr16                                 37023245 1 -  90668790 A-
i Rattus_norvegicus.chr16                                I 12 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915238 1 +   3329780 g-
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 1
s Rhinopithecus_bieti.k119_778604                             2314 2 +      7119 CA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122930 2 + 195417433 CA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237156 2 -   7961872 CA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75303 1 -    116970 G-
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 1
s Saguinus_bicolor.k141_1429097                               4493 2 +     27962 CA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4387 2 +      6077 CA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4477 2 +      5971 CA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4398 2 +      5932 CA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2740 2 -      4390 CA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392177 2 - 209938924 CA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4346 2 +      5979 CA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                916 2 -     22275 CA
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8381 1 +     16473 G-
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 1
s Saimiri_boliviensis.NW_024100920.1                       1109512 2 + 121099817 CA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31079 2 -     47369 CA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31465 2 -     79414 CA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28156 2 -     34454 CA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15557 2 -     22428 CA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30711 2 -     47109 CA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238757 2 +   5703754 CA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8347 2 +     21866 CA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116405 1 +    313613 G-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 41 I 1
s Semnopithecus_entellus.k141_158471                         26055 2 +     27374 CA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29567 2 +     58920 CA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16065 2 -     45317 CA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23723 2 -     42441 CA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26401 2 -     29113 CA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29476 2 -     48123 CA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49740 1 +     77746 A-
i Sigmodon_hispidus.SigHis_scaffold_20193                I 12 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864675 1 -   1910179 G-
i Solenodon_paradoxus.SolPar_flattened_line_126          I 26 I 1
s Sorex_araneus.JH798187.1                                 4671800 1 +  18376816 g-
i Sorex_araneus.JH798187.1                               I 40 I 1
s Spermophilus_dauricus.KZ294078.1                         1868888 1 +   3870691 g-
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7265 1 -     97271 A-
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629             125411 1 +    196729 A-
i Suricata_suricatta.SurSur_flattened_line_6629          I 51 I 1
s Sus_scrofa.CM000828.4                                    6644286 1 +  69701581 a-
i Sus_scrofa.CM000828.4                                  C 0 I 1
s Symphalangus_syndactylus.tarseq_199                       391663 2 +   1523678 TA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14835 1 +     22964 g-
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_224794                3253 1 +      5583 G-
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_7432                      192138 1 +    199430 G-
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    106108 1 -    539355 G-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 1
s Tarsius_lariang.k141_1733899                                1175 2 +      9917 TA
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7973 2 +     20590 TA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353915 2 - 186847797 CA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24603 1 -     33621 G-
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20256 1 -     31044 T-
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_294                    480662 1 -    610378 G-
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_1189070                        21600 2 +     26378 CA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34276 2 -     78344 CA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20925 2 +     25722 CA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29232 2 -     62838 CA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29276 2 +     46913 CA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10085 2 -     28527 CA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31167 2 -     64340 CA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29205 2 -     63452 CA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10652 2 +     22490 CA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4075 2 -      6147 CA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10988 2 -     13050 CA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256218 2 -   6242583 CA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2246 2 +     19340 CA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173994 1 -    200418 G-
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 1
s Trichechus_manatus.JH594705.1                            6481420 1 -  10818551 G-
i Trichechus_manatus.JH594705.1                          C 0 I 1
s Tupaia_chinensis.KB320699.1                              1834912 1 -   4065304 G-
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_394                       8929 1 -     70247 G-
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 1
s Tursiops_truncatus.MRVK01000835.1                       17366239 1 -  33153633 G-
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_46687                    4132 1 -     21056 G-
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 1
s Ursus_maritimus.KK499267.1                                182346 1 +   5085361 a-
i Ursus_maritimus.KK499267.1                             C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_12041                105486 1 -    112863 A-
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 1
s Xerus_inauris.XerIna_scaffold_2302                        174684 1 -    224448 G-
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29387 1 -     86975 a-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_286923                       510 1 -      1899 A-
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1523 1 +      2126 G-
i Ziphius_cavirostris.ZipCav_flattened_line_504766       I 20 I 1
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Vicugna_pacos.KN270157.1                                   76825 1 +   5488506 I
e Varecia_variegata.k141_289850                              24676 0 -    147434 C
e Varecia_rubra.k141_787544                                  25769 0 -     30710 C
e Propithecus_verreauxi.k141_1047036                          8831 0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       95192 0 -     98465 C
e Propithecus_perrieri.k141_1496898                          34913 0 +     46564 C
e Propithecus_edwardsi.k141_635656                            8600 0 -     30655 C
e Propithecus_diadema.k141_153680                             4862 0 -     11706 C
e Propithecus_coronatus.k141_209299                           4265 0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1566627 0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1983117 0 +   4620579 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             84009 0 -     86153 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Mirza_zaza.k141_766280                                     53102 0 -     62432 C
e Microcebus_murinus.CM007674.1                           74985319 0 +  93316391 C
e Lepilemur_septentrionalis.k141_360456                       9489 0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                          9489 0 +     24756 C
e Lepilemur_dorsalis.k141_387009                              9479 0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                          9483 0 +     29618 C
e Leontocebus_nigricollis.k141_3905062                        4206 0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           4376 0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        4622 0 -     13097 C
e Lemur_catta.scaffold_24                                 14759969 0 +  30322482 C
e Indri_indri.k141_2415743                                    2876 0 +     11955 C
e Hapalemur_occidentalis.k141_578367                         17319 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                         10320 0 -     42923 C
e Hapalemur_griseus.k141_763500                              61446 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             36578 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          15176 0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_10447                    2453 0 -     78134 C
e Glis_glis.GliGli_scaffold_33859                            34954 0 -     36801 C
e Eulemur_sanfordi.k141_1122526                              59492 0 -    111500 C
e Eulemur_rufus.k141_514691                                  43089 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            5369 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 48645 0 -     97555 C
e Eulemur_macaco.k141_1562045                                24450 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 53818 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             43494 0 +     68309 C
e Eulemur_coronatus.k141_384460                              86931 0 +    112731 C
e Eulemur_collaris.k141_601111                               42961 0 -     70999 C
e Eulemur_albifrons.k141_51491                               15251 0 -     24895 C
e Daubentonia_madagascariensis.ctg71                        293042 0 +  12879189 C
e Cheirogaleus_medius.k141_759766                             5623 0 -     15404 C
e Cheirogaleus_major.k141_666340                             31106 0 -     33796 C
e Camelus_ferus.KB017975.1                                 1209437 1 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4665777 1 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7631491 1 +  17673402 I
e Avahi_peyrierasi.k141_1823318                               6740 0 -     19611 C
e Avahi_laniger.k141_2756659                                  6732 0 +     11645 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       5955 3 +     36723 A-A-C
s Acinonyx_jubatus.LLWD01001279.1                           813377 3 +   1699592 A-A-C
i Acinonyx_jubatus.LLWD01001279.1                        I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25626 3 +     63021 A-A-C
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415834 3 +  29979442 a-a-c
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                            216176 3 +    347723 a-a-t
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18562 2 -     61208 A-C--
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   48593 3 +     53615 A-A-C
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           624 3 +     13857 A-A-C
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17175 3 -     21945 A-A-C
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18860 3 +     32033 A-A-C
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72701 3 -     84148 A-A-C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44940 3 -     78289 A-A-C
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44379 3 +     55831 A-A-C
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42829 3 -     64179 A-A-C
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24463 3 -     24835 A-A-C
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41454 3 +     45454 A-A-C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47103 3 +     70886 A-A-C
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9276 3 +     30854 A-A-C
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33410 3 +     42133 A-A-C
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585828 3 +   2318259 A-A-C
i Ammotragus_lervia.NIVO01071767.1                       I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177627 3 -    412891 a-a-t
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50935 3 -     68529 A-A-C
i Antilocapra_americana.AntAmePen_scaffold_21030         I 1 C 0
s Aotus_azarae.k141_887050                                    1667 3 +     17741 A-A-C
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2292 3 -     15923 A-A-C
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672574 3 +   5030052 A-A-C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2568 3 -     16391 A-A-C
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2127 3 -     17186 A-A-C
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5893 3 -     15198 A-G-T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 1 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275164 3 +  21539123 A-A-C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11332 3 +     48076 A-A-C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6467 3 -     28759 A-A-C
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34021 3 +     44353 A-A-C
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49392 3 -     71267 A-A-C
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23450 3 -     33135 A-A-C
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6732 3 +     11645 A-A-C
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6740 3 -     19611 A-A-C
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963977 3 -  23207421 A-A-C
i Balaenoptera_acutorostrata.KI537508.1                  I 1 C 0
s Balaenoptera_bonaerensis.DF411050.1                          477 3 -     25979 A-A-C
i Balaenoptera_bonaerensis.DF411050.1                    I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86836 3 +    124022 A-A-C
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 1 C 0
s Bison_bison.KN261452.1                                     22378 3 +    288883 a-a-c
i Bison_bison.KN261452.1                                 I 1 C 0
s Bos_indicus.CM003047.1                                  20356768 3 +  48749331 a-a-c
i Bos_indicus.CM003047.1                                 I 1 C 0
s Bos_mutus.JH880303.1                                      755332 3 +   1948126 a-a-c
i Bos_mutus.JH880303.1                                   I 1 C 0
s Bos_taurus.CM000203.6                                   27545474 3 -  45695690 a-a-c
i Bos_taurus.CM000203.6                                  I 1 C 0
s Bubalus_bubalis.KI419123.1                               1530489 3 -   4408762 A-A-C
i Bubalus_bubalis.KI419123.1                             I 1 C 0
s Cacajao_ayresi.k141_96119                                   8340 3 +     28062 A-A-C
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43634 3 -     91139 A-A-C
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21160 3 +     95584 A-A-C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21073 3 +    119600 A-A-C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10647 3 +     18648 A-A-C
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10182 3 -     13885 A-A-C
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2252 3 -      8861 A-A-C
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454644 3 + 189096842 A-A-C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2167 3 +      8664 A-A-C
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631492 3 +  17673402 A-A-C
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           4665778 3 +   7040546 A-A-C
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                 1209438 3 +   1652518 A-A-C
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           42505857 3 +  60362399 A-A-C
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9493 3 -     23171 A-A-C
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222836 3 +   9314153 A-A-C
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            41615971 3 +  59632846 A-A-C
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            45107552 3 -  63665305 A-A-C
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capra_aegagrus.CM003241.1                               27409557 3 -  46296322 A-A-C
i Capra_aegagrus.CM003241.1                              I 1 C 0
s Capra_hircus.CM004588.1                                 26591831 3 +  44709034 A-A-C
i Capra_hircus.CM004588.1                                I 1 C 0
s Carlito_syrichta.NW_007259797.1                           270944 3 +    496798 A-A-C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                749 3 +      9923 A-A-T
i Carollia_perspicillata.CarPer_scaffold_107871          I 1 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28148 3 -     39886 A-A-C
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80031 3 -    217609 A-A-C
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 C 0
s Cavia_aperea.AVPZ01000300.1                              4996881 3 +  23392119 A-C-C
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000322 3 +  23407841 A-C-C
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63403 3 -     66877 A-C-C
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5565 3 -     12580 A-A-C
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43622 3 +     53515 A-A-C
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373385 3 -  26074798 A-A-C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8439 3 -     34880 A-A-C
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67535 3 -     89041 A-A-C
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2904 3 -      5494 A-A-C
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492664 3 -  27778364 A-G-C
i Ceratotherium_simum.JH767749.1                         I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19497 3 +     27315 A-G-C
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 1 C 0
s Cercocebus_atys.KQ010504.1                                141749 3 -   4669795 A-A-C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45492 3 +     47900 A-A-C
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            921 3 -     14410 A-A-C
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45305 3 -    148725 A-A-C
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27507 3 -     40656 A-A-C
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7471 3 +     20796 A-A-C
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12589 3 -     17524 A-A-C
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28314 3 -     34525 A-A-C
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12092 3 -     25376 A-A-C
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364686 3 -  39242232 A-A-C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270406 3 +  21565898 A-A-C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32774 3 -     45857 A-A-C
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27675 3 -     32606 A-A-C
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3837 3 +      8499 A-A-C
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26233 3 +     70610 A-A-C
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23194 3 +     36323 A-A-C
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13166 5 -     19938 ATAAT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 1 I 7
s Cheirogaleus_major.k141_666340                             31106 3 -     33796 A-A-C
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5623 3 -     15404 A-A-C
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9440 3 -     32913 A-A-C
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19853 3 -     40346 A-A-C
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20108 3 +    216457 A-A-C
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19901 3 +     39636 A-A-C
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239234 3 -   2543920 A-C-C
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4496 4 +      5346 A-AAC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42971 3 -    112038 A-A-C
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8542 3 +     34062 A-A-C
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344095 3 +  18827391 A-A-C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10639 3 -     44032 A-A-C
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305420 3 - 135778131 A-A-C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15295 4 +     15858 A-ATT
i Choloepus_didactylus.ChoDid_scaffold_70559             I 1 I 7
s Choloepus_hoffmanni.KN194906.1                            606870 4 -    839153 a-att
i Choloepus_hoffmanni.KN194906.1                         I 1 I 7
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1985 2 +      2406 a-a--
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          I 1 I 1
s Colobus_angolensis.KN981557.1                             409825 3 -   2368649 A-A-C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379706 3 - 200372422 A-A-C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3263 3 -     84244 A-A-C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807703 3 +  53390261 a-a-t
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3257 3 -      8242 a-a-t
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44762 3 -     83289 A-A-C
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115338 3 - 224834208 A-A-C
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9870 1 +     12657 A----
i Crocidura_indochinensis.CroInd_scaffold_77846          I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4830 3 +     87169 A-A-C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645880 3 -   1526836 A-A-C
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 416 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18786 3 +     50838 A-A-G
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4798 3 +     36344 A-A-C
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28574 3 +     75252 A-A-C
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110520 5 -   2246927 ataat
i Dasypus_novemcinctus.JH564415.1                        I 1 I 7
s Daubentonia_madagascariensis.ctg71                        293042 3 +  12879189 A-A-C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632385 3 -  35494412 A-A-C
i Delphinapterus_leucas.KZ290073.1                       I 1 C 0
s Desmodus_rotundus.KZ672366.1                              330944 3 -   2620052 A-A-T
i Desmodus_rotundus.KZ672366.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664948 3 -   1390856 A-G-C
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139741 3 -    198055 A-G-C
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99322 3 -    115145 A-C-T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950964 3 -  37912305 A-A-C
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5890 3 -     10735 A-A-C
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62855508 4 - 111700974 c-att
i Echinops_telfairi.JH980293.1                           T 510 I 518
s Eidolon_helvum.AWHC01266696.1                               6720 3 +     19438 a-a-t
i Eidolon_helvum.AWHC01266696.1                          I 1 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240198 3 -    607251 A-A-C
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 C 0
s Elephantulus_edwardii.JH947257.1                         9109460 1 -  10337057 ----C
i Elephantulus_edwardii.JH947257.1                       I 177 I 3728
s Ellobius_lutescens.LOEQ01008920.1                          31484 3 +    110024 a-a-c
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13455 3 +     18970 a-a-c
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916588 3 +  41312741 A-A-C
i Enhydra_lutris.KZ291758.1                              I 1 C 0
s Eptesicus_fuscus.JH977646.1                             12579367 3 +  14770903 a-a-t
i Eptesicus_fuscus.JH977646.1                            I 1 C 0
s Equus_asinus.JREZ01000139.1                              3041862 3 -   4378816 A-G-C
i Equus_asinus.JREZ01000139.1                            I 1 C 0
s Equus_caballus.CM000403.2                               21375800 3 +  39960074 A-G-C
i Equus_caballus.CM000403.2                              I 1 C 0
s Equus_przewalskii.ATBW01110277.1                            1181 3 -      1194 A-G-C
i Equus_przewalskii.ATBW01110277.1                       I 1 C 0
s Erinaceus_europaeus.JH835339.1                           3666526 3 +   7059049 a-g-t
i Erinaceus_europaeus.JH835339.1                         I 1 C 0
s Erythrocebus_patas.Contig38                               263633 1 +  21539334 A----
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71594 3 -    133382 A-A-C
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202             1138 3 -      1170 A-A-C
i Eubalaena_japonica.EubJap_flattened_line_247202        I 1 C 0
s Eulemur_albifrons.k141_51491                               15251 3 -     24895 A-A-C
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42961 3 -     70999 A-A-C
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86931 3 +    112731 A-A-C
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43494 3 +     68309 A-A-C
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53818 3 -     65740 A-A-C
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24450 3 -     75513 A-A-C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48645 3 -     97555 A-A-C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5369 3 +     30972 A-A-C
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43089 3 -     52037 A-A-C
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59492 3 -    111500 A-A-C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247286 3 - 206538554 A-A-C
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                          185117072 3 - 205367284 A-A-C
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28169 3 -     30238 A-A-C
i Felis_nigripes.FelNig_flattened_line_31944             I 1 C 0
s Fukomys_damarensis.KN121974.1                            2916879 3 -   3816255 a-a-c
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1618 3 -     28519 A-A-C
i Galeopterus_variegatus.GalVar_scaffold_51812           I 1 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91901 3 -     95226 A-A-C
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 1 C 0
s Gorilla_beringei.k141_3358147                               6255 3 -      8343 A-A-C
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255270 3 - 186649187 A-A-C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15176 3 -     40692 A-A-C
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36578 3 +     49394 A-A-C
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61446 3 -     66874 A-A-C
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10320 3 -     42923 A-A-C
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17319 3 -     53142 A-A-C
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31262 3 -    327341 a-g-c
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9575 3 +     48891 A-A-C
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 1 C 0
s Heterocephalus_glaber.JH602082.1                         1932856 3 -  22651954 A-A-C
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                1649 4 +      4291 c-atc
i Heterohyrax_brucei.HetBruBak_scaffold_154059           T 2319 I 2319
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8086 3 -     36432 A-A-C
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552078 3 -   1711038 a-a-t
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1516 3 -      2730 A-G-T
i Hipposideros_galeritus.HipGal_scaffold_164997          I 1 C 0
s Hoolock_leuconedys.ctg274                                    143279 3 -    630532 A-A-C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70427 3 +     83186 A-A-C
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72318 3 +    143317 A-A-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6313 3 +     12352 A-A-C
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13497 3 +     55766 A-A-C
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053097 3 + 191637585 A-A-C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801975 3 +  11177569 A-A-C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7603 3 -    135385 A-A-C
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Indri_indri.k141_2415743                                    2876 3 +     11955 A-A-C
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10486 3 -     16823 A-A-C
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 1 C 0
s Jaculus_jaculus.JH725527.1                               1240341 2 +   9596543 A-C--
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_3970                 72329 3 -     97402 A-A-C
i Kogia_breviceps.KogBre_flattened_line_3970             I 1 C 0
s Lagothrix_lagothricha.k141_246028                          43717 3 +    110728 A-A-C
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63339 3 -     65777 a-a-t
i Lasiurus_borealis.LasBor_scaffold_16567                I 1 I 18
s Lemur_catta.scaffold_24                                 14759969 3 +  30322482 A-A-C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4622 1 -     13097 ----C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4376 1 +      5940 ----C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4206 1 -      5717 ----C
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10587 3 -     11567 A-A-C
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11968 3 -     12945 A-A-C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9483 3 +     29618 A-A-C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9479 3 +     31569 A-A-C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9489 3 +     24756 A-A-C
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9489 3 +     16388 A-A-C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813964 3 -   3914936 A-A-C
i Leptonychotes_weddellii.KB714746.1                     I 1 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18335 1 +     24238 A----
i Lepus_americanus.LepAme_scaffold_56121                 I 1 C 0
s Lipotes_vexillifer.KE559953.1                             341671 3 +    662738 A-A-C
i Lipotes_vexillifer.KE559953.1                          I 1 C 0
s Lophocebus_aterrimus.ctg367                               334634 3 -   1826925 A-A-C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39082287 4 +  43346337 c-att
i Loxodonta_africana.GL010049.1                          T 2368 I 2368
s Lycaon_pictus.CM007581.1                                41615126 3 +  59628241 A-A-C
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_1757516                              46029 2 -     61512 A-A--
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373691 2 -  60120075 A-A--
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25953 3 +     30207 A-A-C
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             791 3 -      5035 A-A-C
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25906 3 +     30527 A-A-C
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37082 3 -     50087 A-A-C
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46826 3 +     51645 A-A-C
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416029 3 - 187317192 A-A-C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400259 3 +  25927173 A-A-C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49431 3 -     62418 A-A-C
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1968 2 +     14901 A-A--
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45903 3 +     59329 A-A-C
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271811 3 +    668171 A-A-C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   455 2 -      5049 A-A--
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3609 3 +     17132 A-A-C
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223687 3 -    270270 a-a-t
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 1 C 0
s Mandrillus_leucophaeus.scaffold280                        323099 3 +  24302211 A-A-C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357930 3 -    752769 A-A-C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674017 3 -    737560 a-c-t
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                             221313 3 +    317179 a-c-t
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150862 3 +    207569 A-A-T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26687 3 -     74585 A-A-C
i Mellivora_capensis.MelCap_flattened_line_19308         I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50663 3 -    140813 A-A-A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429722 3 +  29670104 A-A-C
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87955 3 +     93471 A-A-C
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 1 C 0
s Mico_argentatus.k141_582562                                10754 3 +     17804 A-A-C
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11254 3 -     12984 A-A-C
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19570 3 -     26561 A-A-C
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985319 3 +  93316391 A-G-C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    46772 4 +    145209 t-att
i Microgale_talazaci.MicTal_scaffold_6613                T 481 I 489
s Micronycteris_hirsuta.MicHir_scaffold_2233                185546 3 +    200668 A-A-T
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 1 C 0
s Microtus_ochrogaster.CM001695.1                         15962929 3 +  27267610 a-a-c
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363702 3 -   8254450 a-a-t
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42609 3 -     48117 a-a-t
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         23133 3 -     27822 A-A-C
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8975 3 +     27589 A-A-C
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 1 C 0
s Mirza_zaza.k141_766280                                     53102 3 -     62432 A-G-C
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360060 3 +    437263 A-A-C
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179778 3 +    366855 a-a-t
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26023 3 -     82753 A-A-C
i Moschus_moschiferus.MosMos_scaffold_13123              I 1 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19013 3 -     63510 A-A-C
i Mungos_mungo.MunMun_flattened_line_18455               I 1 C 0
s Murina_feae.MurFea_scaffold_17764                          39680 3 +     47283 A-A-T
i Murina_feae.MurFea_scaffold_17764                      I 1 C 0
s Mus_caroli.LT608237.1                                   35593641 3 + 120012414 a-a-c
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688030 3 + 129401213 A-A-C
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497324 3 + 130317789 a-a-c
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                             14355610 3 +  14710649 A-A-C
i Mustela_putorius.JH418006.1                            I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63568 3 +     67721 A-A-G
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793927 3 +  10118263 a-a-t
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                4388099 3 +   6019432 a-a-t
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                               383887 3 +   4330536 a-a-t
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2696 3 +     18357 a-a-t
i Myotis_myotis.MyoMyo_scaffold_66571                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120264 4 +    130748 C-ATT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 1 I 10
s Nannospalax_galili.KL204047.1                             946802 3 +   3037898 a-a-c
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29782 3 +     34575 A-A-C
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232736 3 -   7148211 A-A-C
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128743 3 -    149072 a-a-t
i Noctilio_leporinus.NocLep_scaffold_7894                I 1 C 0
s Nomascus_annamensis.k141_1771965                           54205 3 -    132029 A-A-C
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10300 3 -     16345 A-A-C
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16185 3 +     22201 A-A-C
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414406 3 -  22158432 A-A-C
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26583 3 -     54323 A-A-C
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198722 3 +   9404916 A-A-C
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Ochotona_princeps.JH802162.1                             2557392 1 -   3988456 G----
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Octodon_degus.JH651603.1                                11055524 3 -  11899542 a-a-g
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452181 3 +   2017862 a-a-a
i Odobenus_rosmarus.KB229312.1                           I 1 C 0
s Odocoileus_virginianus.KZ100018.1                         436791 3 -    630418 A-A-C
i Odocoileus_virginianus.KZ100018.1                      I 1 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14784 3 +    150152 A-A-C
i Okapia_johnstoni.LVCL01S0005463.1                      I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93281 3 -    140218 A-A-C
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4161 3 -     41509 G-A-C
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103128 3 +  10937097 a-a-c
i Orcinus_orca.KB316932.1                                I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_2034494               258 2 -       302 A-A--
i Orycteropus_afer.OryAfe_flattened_line_2034494         I 1 I 1
s Oryctolagus_cuniculus.CM000791.1                       107104129 1 - 174332312 A----
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39767 3 +    559221 A-A-C
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Ovis_aries.CM001607.2                                   26404695 3 -  44047080 A-A-C
i Ovis_aries.CM001607.2                                  I 1 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5214 3 +     17875 A-A-C
i Ovis_canadensis.OviCan_scaffold_67953                  I 1 C 0
s Pan_troglodytes.CM009242.2                               1473299 3 - 189151597 A-A-C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24992 3 -    230217 A-A-C
i Panthera_onca.PanOnc_flattened_line_3271               I 1 C 0
s Panthera_pardus.KV860321.1                              18462318 3 -  18783137 A-A-C
i Panthera_pardus.KV860321.1                             I 1 C 0
s Panthera_tigris.KE722367.1                               3972977 3 +   8748460 A-A-C
i Panthera_tigris.KE722367.1                             I 1 C 0
s Pantholops_hodgsonii.KE114653.1                          1616223 3 +   2937107 A-A-C
i Pantholops_hodgsonii.KE114653.1                        I 1 C 0
s Papio_anubis.CM001495.2                                   243931 3 - 183742232 A-A-C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10393 3 +     21308 A-A-C
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292966 3 -  20919399 A-A-C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23041 3 -     27687 A-A-C
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16187 3 +     16796 A-A-C
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 22998 3 -     23640 A-A-C
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15590 3 +     78924 A-A-C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2317 3 +      9367 A-A-C
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247360 3 +  18517816 A-G-C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32445 3 -     56120 A-A-T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4654 3 -     63832 A-A-C
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 1 C 0
s Piliocolobus_badius.k141_2704958                            3213 3 +     55023 A-A-C
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2751 3 -     89929 A-A-C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3341 3 +     40849 A-A-C
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255015 3 +  14605196 A-A-C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4516 3 +     22231 A-A-T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 1 C 0
s Pithecia_albicans.k141_1239476                             65338 3 +    207309 A-A-C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6430 3 -     25401 A-A-C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32174 3 +     58159 A-A-C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32450 3 +     63561 A-A-C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32210 3 +     51148 A-A-C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557180 3 -   4542175 A-A-C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32194 3 +     51125 A-A-C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1671 3 +     19503 A-A-C
i Platanista_gangetica.PlaMin_flattened_line_83166       I 1 C 0
s Plecturocebus_bernhardi.k141_2549090                        8605 3 +     39866 A-A-C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3687 3 -      9282 A-A-C
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43091 3 -     87950 A-A-C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43487 3 -     88961 A-A-C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8183 3 -     39403 A-A-C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43134 3 +     87928 A-A-C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8182 3 -     60166 A-A-C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15119 3 -     67232 A-A-C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43035 3 -     90634 A-A-C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44502 3 +     89403 A-A-C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178408 3 - 189387572 a-a-c
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193225 3 -   9816681 A-A-C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28362 3 +     69807 A-A-C
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45543 3 -     80239 A-A-C
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 1474 4 +      7663 c-atc
i Procavia_capensis.ProCapCap_scaffold_165387            T 2396 I 2396
s Prolemur_simus.MPIZ01000396.1                            1983117 3 +   4620579 A-A-C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566627 3 -   2598838 A-A-C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4265 3 -      7103 A-A-C
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4862 3 -     11706 A-A-C
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8600 3 -     30655 A-A-C
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34913 3 +     46564 A-A-C
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95192 3 -     98465 A-A-C
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8831 3 +     35169 A-A-C
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37964 2 +     52041 A-A--
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52671 3 -     66298 a-a-t
i Pteronotus_parnellii.KE847780.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5183 3 -     18639 A-A-C
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 1 C 0
s Pteropus_alecto.KB030862.1                               5841260 3 -  28871421 a-a-t
i Pteropus_alecto.KB030862.1                             I 1 C 0
s Pteropus_vampyrus.KN525825.1                             3537775 3 -   4952924 a-a-t
i Pteropus_vampyrus.KN525825.1                           I 1 C 0
s Puma_concolor.QAVW01001104.1                            18099635 3 +  38429054 A-A-C
i Puma_concolor.QAVW01001104.1                           I 1 C 0
s Pygathrix_cinerea.k141_1153803                             27738 3 +     91421 A-A-C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154222 3 -   7812017 A-A-C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8595 3 +     72585 A-A-C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53708 3 +     55069 A-A-C
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 1 C 0
s Rattus_norvegicus.chr16                                 37023246 3 -  90668790 A-A-C
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915240 3 +   3329780 a-a-t
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_778604                             2316 3 +      7119 A-A-C
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122932 3 + 195417433 A-A-C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237158 3 -   7961872 A-A-C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75305 3 -    116970 A-A-T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 1 C 0
s Saguinus_bicolor.k141_1429097                               4495 3 +     27962 A-A-C
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4389 3 +      6077 A-A-C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4479 3 +      5971 A-A-C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4400 3 +      5932 A-A-C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2742 3 -      4390 A-A-C
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392179 3 - 209938924 A-A-C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4348 3 +      5979 A-A-C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                918 3 -     22275 A-A-C
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8383 3 +     16473 A-A-C
i Saiga_tatarica.SaiTat_scaffold_39512                   I 1 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109514 3 + 121099817 A-A-C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31081 3 -     47369 A-A-C
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31467 3 -     79414 A-A-C
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28158 3 -     34454 A-A-C
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15559 3 -     22428 A-A-C
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30713 3 -     47109 A-A-C
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238759 3 +   5703754 A-A-C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8349 3 +     21866 A-A-C
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116407 3 +    313613 A-A-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_158471                         26057 3 +     27374 A-A-C
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29569 3 +     58920 A-A-C
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16067 3 -     45317 A-A-C
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23725 3 -     42441 A-A-C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26403 3 -     29113 A-A-C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29478 3 -     48123 A-A-C
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49741 3 +     77746 A-A-C
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864677 3 -   1910179 C-A-T
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Sorex_araneus.JH798187.1                                 4671802 2 +  18376816 a-a--
i Sorex_araneus.JH798187.1                               I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7267 3 -     97271 A-A-C
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125413 3 +    196729 A-A-C
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                    6644288 3 +  69701581 a-a-c
i Sus_scrofa.CM000828.4                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_199                       391665 3 +   1523678 A-A-C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14837 3 +     22964 a-a-t
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3255 4 +      5583 A-ATT
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 1 I 10
s Tapirus_indicus.TapInd_scaffold_7432                      192140 3 +    199430 A-G-C
i Tapirus_indicus.TapInd_scaffold_7432                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106110 3 -    539355 A-G-C
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 C 0
s Tarsius_lariang.k141_1733899                                1177 3 +      9917 A-A-C
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7975 3 +     20590 A-A-C
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353917 3 - 186847797 A-A-C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24604 3 -     33621 A-A-T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20258 5 -     31044 ATAAT
i Tolypeutes_matacus.TolMat_scaffold_31955               I 1 I 7
s Tonatia_saurophila.TonSau_scaffold_294                    480664 3 -    610378 A-A-C
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_1189070                        21602 3 +     26378 A-A-C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34278 3 -     78344 A-A-C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20927 3 +     25722 A-A-C
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29234 3 -     62838 A-A-C
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29278 3 +     46913 A-A-C
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10087 3 -     28527 A-A-C
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31169 3 -     64340 A-A-C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29207 3 -     63452 A-A-C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10654 3 +     22490 A-A-C
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4077 3 -      6147 A-A-C
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10990 3 -     13050 A-A-C
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256220 3 -   6242583 A-A-C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2248 3 +     19340 A-A-C
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173996 3 -    200418 A-A-C
i Tragulus_javanicus.TraJav_scaffold_3462                I 1 C 0
s Trichechus_manatus.JH594705.1                            6481422 2 -  10818551 A-A--
i Trichechus_manatus.JH594705.1                          I 1 I 1
s Tupaia_chinensis.KB320699.1                              1834914 3 -   4065304 A-A-C
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8931 3 -     70247 A-A-C
i Tupaia_tana.TupTan_flattened_line_394                  I 1 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366241 3 -  33153633 A-A-C
i Tursiops_truncatus.MRVK01000835.1                      I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4134 3 -     21056 A-A-T
i Uropsilus_gracilis.UroGra_scaffold_46687               I 1 C 0
s Ursus_maritimus.KK499267.1                                182348 3 +   5085361 a-a-c
i Ursus_maritimus.KK499267.1                             I 1 C 0
s Varecia_rubra.k141_787544                                  25769 3 -     30710 A-A-C
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24676 3 -    147434 A-A-C
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76826 3 +   5488506 A-A-C
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105488 3 -    112863 A-A-C
i Vulpes_lagopus.VulLag_flattened_line_12041             I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29389 3 -     86975 a-a-c
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       511 3 -      1899 A-A-T
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1525 3 +      2126 A-A-C
i Ziphius_cavirostris.ZipCav_flattened_line_504766       I 1 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Perodicticus_potto.k141_1854441                            19967 0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          27598 0 +     31479 C
e Otolemur_garnettii.GL873799.1                             354272 0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        41268 0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566099 0 - 199412804 C
e Nycticebus_coucang.k141_1296080                             1322 0 -      9413 C
e Nycticebus_bengalensis.LG01                             93638719 0 + 196305487 C
e Loris_tardigradus.ctg83                                  5045489 0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                           11819 0 +     19643 C
e Galagoides_demidoff.k141_561628                            21738 0 -     32986 C
e Galago_senegalensis.k141_991736                             9667 0 +     22493 C
e Galago_moholi.ctg3793                                     126122 0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       20758 0 -     45910 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Xerus_inauris.XerIna_scaffold_2302                        174685 0 -    224448 C
e Spermophilus_dauricus.KZ294078.1                         1868889 0 +   3870691 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             84009 0 -     86153 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Marmota_marmota.CZRN01000018.1                           7501529 0 +  40650429 C
e Ictidomys_tridecemlineatus.JH393364.1                     387311 0 +   7955117 C
e Graphiurus_murinus.GraMur_scaffold_10447                    2453 0 -     78134 C
e Glis_glis.GliGli_scaffold_33859                            34954 0 -     36801 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      16639 0 -     32367 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       5958 10 +     36723 ACA----AAA-----------------------CAT----G
s Acinonyx_jubatus.LLWD01001279.1                           813380 10 +   1699592 ACG----AGA-----------------------CAG----G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 8
s Acomys_cahirinus.AcoCah_scaffold_21377                     25629  9 +     63021 ACA-----AA-----------------------TGG----A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 8
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415837 10 +  29979442 aca----aaa-----------------------cat----g
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 8
s Ailurus_fulgens.LNAC01001112.1                            216179 10 +    347723 aca----aaa-----------------------cat----g
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 8
s Allenopithecus_nigroviridis.k141_3755588                   48596 10 +     53615 ACA----AAA-----------------------CAT----G
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           627 10 +     13857 ACA----AAA-----------------------CAT----G
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17178 10 -     21945 ACA----AAA-----------------------CAT----G
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18863 10 +     32033 ACA----AAA-----------------------CAT----G
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72704 10 -     84148 ACA----AAA-----------------------CAT----G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44943 10 -     78289 ACA----AAA-----------------------CAT----G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44382 10 +     55831 ACA----AAA-----------------------CAT----G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42832 10 -     64179 ACA----AAA-----------------------CAT----G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24466 10 -     24835 ACA----AAA-----------------------CAT----G
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41457 10 +     45454 ACA----AAA-----------------------CAT----G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47106 10 +     70886 ACA----AAA-----------------------CAT----G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9279 10 +     30854 ACA----AAA-----------------------CAT----G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33413 10 +     42133 ACA----AAA-----------------------CAT----G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585831 10 +   2318259 ACA----AAG-----------------------CAT----T
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 8
s Anoura_caudifer.AnoCau_scaffold_1412                      177630 10 -    412891 ata----aaa-----------------------cat----g
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 8
s Antilocapra_americana.AntAmePen_scaffold_21030             50938 10 -     68529 ACA----AAG-----------------------CAT----T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 8
s Aotus_azarae.k141_887050                                    1670 10 +     17741 ACA----AAA-----------------------CAT----G
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2295 10 -     15923 ACA----AAA-----------------------CAT----G
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672577 10 +   5030052 ACA----AAA-----------------------CAT----G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2571 10 -     16391 ACA----AAA-----------------------CAT----G
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2130 10 -     17186 ACA----AAA-----------------------CAT----G
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16639 12 -     32367 --AAACAAAA-----------------------TAC----A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 8
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5896 10 -     15198 ATA----AAA-----------------------CGT----G
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 8
s Ateles_geoffroyi_b.tarseq_1536                               275167 10 +  21539123 ACA----AAA-----------------------CAT----G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11335 10 +     48076 ACA----AAA-----------------------CAT----G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6470 10 -     28759 ACA----AAA-----------------------CAT----G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34024 10 +     44353 ACA----AAA-----------------------CAT----G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49395 10 -     71267 ACA----AAA-----------------------CAT----G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23453 10 -     33135 ACA----AAA-----------------------CAT----G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6735 10 +     11645 ACG----AAG-----------------------TGT----G
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6743 10 -     19611 ACG----AAG-----------------------TGT----G
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963980 10 -  23207421 ACA----AAA-----------------------CAT----T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 8
s Balaenoptera_bonaerensis.DF411050.1                          480 10 -     25979 ACA----AAA-----------------------CAT----T
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 8
s Beatragus_hunteri.BeaHun_scaffold_7278                     86839 10 +    124022 ACA----AAG-----------------------CAT----T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 8
s Bison_bison.KN261452.1                                     22381 10 +    288883 aCA----AAG-----------------------CAT----T
i Bison_bison.KN261452.1                                 C 0 I 8
s Bos_indicus.CM003047.1                                  20356771 10 +  48749331 aCA----AAG-----------------------CAT----T
i Bos_indicus.CM003047.1                                 C 0 I 8
s Bos_mutus.JH880303.1                                      755335 10 +   1948126 aCA----AAG-----------------------CAT----T
i Bos_mutus.JH880303.1                                   C 0 I 8
s Bos_taurus.CM000203.6                                   27545477 10 -  45695690 aCA----AAG-----------------------CAT----T
i Bos_taurus.CM000203.6                                  C 0 I 8
s Bubalus_bubalis.KI419123.1                               1530492 10 -   4408762 ACA----AAG-----------------------CAT----T
i Bubalus_bubalis.KI419123.1                             C 0 I 8
s Cacajao_ayresi.k141_96119                                   8343 10 +     28062 ACA----AAA-----------------------CAT----G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43637 10 -     91139 ACA----AAA-----------------------CAT----G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21163 10 +     95584 ACA----AAA-----------------------CAT----G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21076 10 +    119600 ACA----AAA-----------------------CAT----G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10650 10 +     18648 ACA----AAA-----------------------CAT----C
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10185 10 -     13885 ACA----CAA-----------------------CAT----G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2255 10 -      8861 AGA----AAA-----------------------CAT----G
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454647 10 + 189096842 AGA----AAA-----------------------CAT----G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2170 10 +      8664 AGA----AAA-----------------------CAT----G
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631495 10 +  17673402 ACA----AAA-----------------------CGT----T
i Camelus_bactrianus.KN276810.1                          C 0 I 8
s Camelus_dromedarius.KN272107.1                           4665781 10 +   7040546 ACA----AAA-----------------------CGT----T
i Camelus_dromedarius.KN272107.1                         C 0 I 8
s Camelus_ferus.KB017975.1                                 1209441 10 +   1652518 ACA----AAA-----------------------CGT----T
i Camelus_ferus.KB017975.1                               C 0 I 8
s CanFam4.chr16                                           42505860 10 +  60362399 CCC----AAA-----------------------CAT----G
i CanFam4.chr16                                          C 0 I 8
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9496 10 -     23171 CCC----AAA-----------------------CAT----G
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 8
s Canis_lupus_dingo.QKWQ01000480.1                          222839 10 +   9314153 CCC----AAA-----------------------CAT----G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 8
s Canis_lupus_familiaris.chr16                            41615974 10 +  59632846 CCC----AAA-----------------------CAT----G
i Canis_lupus_familiaris.chr16                           C 0 I 8
s Canis_lupus_orion.HG994398.1                            45107555 10 -  63665305 CCC----AAA-----------------------CAT----G
i Canis_lupus_orion.HG994398.1                           C 0 I 8
s Capra_aegagrus.CM003241.1                               27409560 10 -  46296322 ACA----AAG-----------------------CAT----T
i Capra_aegagrus.CM003241.1                              C 0 I 8
s Capra_hircus.CM004588.1                                 26591834 10 +  44709034 ACA----AAG-----------------------CAT----T
i Capra_hircus.CM004588.1                                C 0 I 8
s Capromys_pilorides.CapPil_scaffold_762519                      0 10 -      1607 ACA----AGA-----------------------TAT----A
i Capromys_pilorides.CapPil_scaffold_762519              N 0 I 8
s Carlito_syrichta.NW_007259797.1                           270947 10 +    496798 ACA----AAA-----------------------CAT----G
i Carlito_syrichta.NW_007259797.1                        C 0 I 8
s Carollia_perspicillata.CarPer_scaffold_107871                752 10 +      9923 ATA----AAA-----------------------CGT----G
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 8
s Castor_canadensis.CasCan_scaffold_39952                    28151 10 -     39886 ACA----AAA-----------------------TAC----A
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 11
s Catagonus_wagneri.CatWag_scaffold_2839                     80034 10 -    217609 ACA----AAA-----------------------CAT----T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 8
s Cavia_aperea.AVPZ01000300.1                              4996884 10 +  23392119 ACA----AAT-----------------------TAT----A
i Cavia_aperea.AVPZ01000300.1                            C 0 I 8
s Cavia_porcellus.DS562891.1                               5000325 10 +  23407841 ACA----AAT-----------------------TAT----A
i Cavia_porcellus.DS562891.1                             C 0 I 8
s Cavia_tschudii.CavTsc_scaffold_23560                       63406 10 -     66877 ACA----AAT-----------------------TAT----A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 8
s Cebuella_niveiventris.k141_592277                           5568 10 -     12580 ACC----AAA-----------------------CAT----C
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43625 10 +     53515 ACC----AAA-----------------------CAT----C
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373388 10 -  26074798 ACA----AAA-----------------------CAT----G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8442 10 -     34880 ACA----AAA-----------------------CAT----G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67538 10 -     89041 ACA----AAA-----------------------CAT----G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2907 10 -      5494 ACA----AAA-----------------------CAT----G
i Cephalopachus_bancanus.k141_1689090                    C 0 I 8
s Ceratotherium_simum.JH767749.1                          15492667 10 -  27778364 ACA----AAT-----------------------CCT----T
i Ceratotherium_simum.JH767749.1                         C 0 I 8
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19500 10 +     27315 ACA----AAT-----------------------CCT----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 8
s Cercocebus_atys.KQ010504.1                                141752 10 -   4669795 ACA----AAA-----------------------CAT----G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45495 10 +     47900 ACA----AAA-----------------------CAT----G
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            924 10 -     14410 ACA----AAA-----------------------CAT----G
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45308 10 -    148725 ACA----AAA-----------------------CAT----G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27510 10 -     40656 ACA----AAA-----------------------CGT----G
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7474 10 +     20796 ACA----AAA-----------------------CGT----G
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12592 10 -     17524 ACA----AAA-----------------------CAT----G
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28317 10 -     34525 ACA----AAA-----------------------CAT----G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12095 10 -     25376 ACA----AAA-----------------------CAT----G
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364689 10 -  39242232 ACA----AAA-----------------------CAT----G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270409 10 +  21565898 ACA----AAA-----------------------CAT----G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32777 10 -     45857 ACA----AAA-----------------------CAT----G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27678 10 -     32606 ACA----AAA-----------------------CAT----G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3840 10 +      8499 ACA----AAA-----------------------CAT----G
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26236 10 +     70610 ACA----AAA-----------------------CAT----G
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23197 10 +     36323 ACA----AAA-----------------------CAT----G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13178  8 -     19938 C------AAA-----------------------CAT----A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 7 I 8
s Cheirogaleus_major.k141_666340                             31109 10 -     33796 ACA----AAA-----------------------TGT----G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5626 10 -     15404 ACA----AAA-----------------------TGT----G
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9443 10 -     32913 ACA----AAA-----------------------CAT----G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19856 10 -     40346 ACA----AAA-----------------------CAT----G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20111 10 +    216457 ACA----AAA-----------------------CAT----G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19904 10 +     39636 ACA----AAA-----------------------CAT----G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239237 10 -   2543920 ATA----AAA-----------------------TAT----A
i Chinchilla_lanigera.JH722012.1                         C 0 I 8
s Chiropotes_albinasus.k141_1946120                           4500 10 +      5346 ACA----AAA-----------------------CAT----G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42974 10 -    112038 ACA----AAA-----------------------CAT----G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8545 10 +     34062 ACA----AAA-----------------------CAT----G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344098 10 +  18827391 ACA----AAA-----------------------CAT----G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10642 10 -     44032 ACA----AAA-----------------------CAT----G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305423 10 - 135778131 ACA----AAA-----------------------CAT----G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15306 10 +     15858 AAG----AAA-----------------------CAT----G
i Choloepus_didactylus.ChoDid_scaffold_70559             I 7 I 8
s Choloepus_hoffmanni.KN194906.1                            606881 10 -    839153 aag----aaa-----------------------cat----g
i Choloepus_hoffmanni.KN194906.1                         I 7 I 8
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               1988 22 +      2406 --------aatTAAAAAGCAAA-CCAACA------A----G
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          I 1 I 8
s Colobus_angolensis.KN981557.1                             409828 10 -   2368649 ACA----AAA-----------------------CAT----G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379709 10 - 200372422 ACA----AAA-----------------------CAT----G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3266 10 -     84244 ACA----AAA-----------------------CAT----G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807706 10 +  53390261 ata----aaa-----------------------tgt----g
i Condylura_cristata.JH655891.1                          C 0 I 8
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3260 10 -      8242 ata----aaa-----------------------cat----g
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 8
s Cricetomys_gambianus.CriGam_scaffold_14425                 44765  9 -     83289 ACA-----AA-----------------------TGG----A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 8
s Cricetulus_griseus.LT883664.1                          213115341 13 - 224834208 ACA-----AA-----------------------CGAAATGA
i Cricetulus_griseus.LT883664.1                          C 0 I 8
s Crocidura_indochinensis.CroInd_scaffold_77846               9871  1 +     12657 ----------------------------------------A
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 8
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4833 10 +     87169 ACA----AAA-----------------------CAG----G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 8
s Ctenodactylus_gundi.CteGun_scaffold_65                    645883 10 -   1526836 ACA----AAA-----------------------TAT----A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 8
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18789 10 +     50838 ACA----AAA-----------------------TAT----A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 8
s Cuniculus_paca.CunPac_flattened_line_7025                   4801 10 +     36344 ACA----AAG-----------------------TAT----A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 8
s Dasyprocta_punctata.DasPun_flattened_line_15900            28577 10 +     75252 ACA----GAA-----------------------TGT----A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 8
s Dasypus_novemcinctus.JH564415.1                          2110532 10 -   2246927 caa----aaa-----------------------cat----a
i Dasypus_novemcinctus.JH564415.1                        I 7 I 8
s Daubentonia_madagascariensis.ctg71                        293045 10 +  12879189 ACA----AAA-----------------------CGT----G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632388 10 -  35494412 ACA----AAA-----------------------CAT----T
i Delphinapterus_leucas.KZ290073.1                       C 0 I 8
s Desmodus_rotundus.KZ672366.1                              330947 10 -   2620052 ATA----CCA-----------------------CGT----G
i Desmodus_rotundus.KZ672366.1                           C 0 I 8
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664951 10 -   1390856 ATA----AAT-----------------------TCT----T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 8
s Diceros_bicornis.DicBicMic_scaffold_5955                  139744 10 -    198055 ACA----AAT-----------------------CCT----T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 8
s Dinomys_branickii.DinBra_scaffold_10381                    99325 10 -    115145 ACA----CAA-----------------------TAT----A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 8
s Dipodomys_ordii.KN672350.1                              18950967 10 -  37912305 AGG----AAG-----------------------TAT----A
i Dipodomys_ordii.KN672350.1                             C 0 I 8
s Dipodomys_stephensi.DipSte_scaffold_89095                   5893 10 -     10735 AGG----AAG-----------------------TAT----A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 8
s Echinops_telfairi.JH980293.1                            62856030  2 - 111700974 -----------------------------------T----G
i Echinops_telfairi.JH980293.1                           I 518 I 8
s Eidolon_helvum.AWHC01266696.1                               6723 10 +     19438 aga----aaa-----------------------cac----g
i Eidolon_helvum.AWHC01266696.1                          C 0 I 8
s Elaphurus_davidianus.JRFZ01104969.1                       240201 10 -    607251 ACA----AAG-----------------------CAT----T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 8
s Elephantulus_edwardii.JH947257.1                         1226166 20 +  10337057 ttt----taa-----------aaaataataata--t----g
i Elephantulus_edwardii.JH947257.1                       I 4 I 8
s Ellobius_lutescens.LOEQ01008920.1                          31487  9 +    110024 aca-----aa-----------------------tga----a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 8
s Ellobius_talpinus.LOJH01026522.1                           13458  9 +     18970 aca-----aa-----------------------tga----a
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 8
s Enhydra_lutris.KZ291758.1                               24916591  9 +  41312741 ACA-----AA-----------------------CAT----G
i Enhydra_lutris.KZ291758.1                              C 0 I 8
s Eptesicus_fuscus.JH977646.1                             12579370 10 +  14770903 ata----gag-----------------------tat----a
i Eptesicus_fuscus.JH977646.1                            C 0 I 8
s Equus_asinus.JREZ01000139.1                              3041865 10 -   4378816 ACA----AAT-----------------------CAT----G
i Equus_asinus.JREZ01000139.1                            C 0 I 8
s Equus_caballus.CM000403.2                               21375803 10 +  39960074 ACA----AAT-----------------------CAT----G
i Equus_caballus.CM000403.2                              C 0 I 8
s Equus_przewalskii.ATBW01110277.1                            1184 10 -      1194 ACA----AAT-----------------------CAT----G
i Equus_przewalskii.ATBW01110277.1                       C 0 n 0
s Erinaceus_europaeus.JH835339.1                           3666529 10 +   7059049 tta----aaa-----------------------tat----g
i Erinaceus_europaeus.JH835339.1                         C 0 I 8
s Erythrocebus_patas.Contig38                               263634 10 +  21539334 ACA----AAA-----------------------CAT----G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71597  7 -    133382 ACA----AAA-----------------------C-------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 8
s Eubalaena_japonica.EubJap_flattened_line_247202             1141 10 -      1170 ACA----AAA-----------------------CAT----T
i Eubalaena_japonica.EubJap_flattened_line_247202        C 0 I 8
s Eulemur_albifrons.k141_51491                               15254 10 -     24895 ACG----AAA-----------------------TGG----G
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42964 10 -     70999 ACG----AAA-----------------------TGG----G
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86934 10 +    112731 ACG----AAA-----------------------TGG----G
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43497 10 +     68309 ACG----AAA-----------------------TGG----G
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53821 10 -     65740 ACG----AAA-----------------------TGG----G
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24453 10 -     75513 ACG----AAA-----------------------TGG----G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48648 10 -     97555 ACG----AAA-----------------------TGG----G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5372 10 +     30972 ACG----AAA-----------------------TGG----G
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43092 10 -     52037 ACG----AAA-----------------------TGG----G
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59495 10 -    111500 ACG----AAA-----------------------TGG----G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247289 10 - 206538554 ACG----AGA-----------------------CAG----G
i Felis_catus.CM001381.2                                 C 0 I 8
s Felis_catus_fca126.CM031415.1                          185117075 10 - 205367284 ACG----AGA-----------------------CAG----G
i Felis_catus_fca126.CM031415.1                          C 0 I 8
s Felis_nigripes.FelNig_flattened_line_31944                 28172 10 -     30238 ACA----AGA-----------------------CAG----G
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 8
s Fukomys_damarensis.KN121974.1                            2916882 10 -   3816255 aca----aaa-----------------------tat----a
i Fukomys_damarensis.KN121974.1                          C 0 I 8
s Galeopterus_variegatus.GalVar_scaffold_51812                1621 10 -     28519 ACA----AAA-----------------------CAT----G
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 I 8
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91904 10 -     95226 ACA----AAG-----------------------CAT----T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 8
s Gorilla_beringei.k141_3358147                               6258 10 -      8343 ACA----AAA-----------------------CAT----G
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255273 10 - 186649187 ACA----AAA-----------------------CAT----G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15179 10 -     40692 ACG----AAA-----------------------CGT----G
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36581 10 +     49394 ACG----AAA-----------------------CGT----G
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61449 10 -     66874 ACG----AAA-----------------------CGT----G
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10323 10 -     42923 ACG----AAA-----------------------CGT----G
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17322 10 -     53142 ACG----AAA-----------------------CGT----G
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31265 10 -    327341 aca----aaa-----------------------cag----g
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 8
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9578 10 +     48891 ACA----AAG-----------------------CAT----T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 8
s Heterocephalus_glaber.JH602082.1                         1932859 10 -  22651954 ACA----AAA-----------------------TAT----A
i Heterocephalus_glaber.JH602082.1                       C 0 I 8
s Heterohyrax_brucei.HetBruBak_scaffold_154059                3972 12 +      4291 AAA----AAAA------------------T---CAT----G
i Heterohyrax_brucei.HetBruBak_scaffold_154059           I 2319 I 8
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8089 10 -     36432 ACA----AAA-----------------------CAT----T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 8
s Hipposideros_armiger.JXIK01000431.1                      1552081 10 -   1711038 aca----aaa-----------------------cct----g
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 8
s Hipposideros_galeritus.HipGal_scaffold_164997               1519 10 -      2730 ACA----AAA-----------------------CCT----G
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 8
s Hoolock_leuconedys.ctg274                                    143282 10 -    630532 ACA----AAA-----------------------CAT----G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70430 10 +     83186 CCA----GAA-----------------------CAG----G
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 8
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72321 10 +    143317 ACA----AAA-----------------------TAT----A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 8
s Hylobates_agilis.k141_1155965                               6316 10 +     12352 ACA----AAA-----------------------CAT----G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13500 10 +     55766 ACA----AAA-----------------------CAT----G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053100 10 + 191637585 ACA----AAA-----------------------CAT----G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801978 10 +  11177569 ACA----AAA-----------------------CAT----G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7606 10 -    135385 ACA----AAA-----------------------TGT----A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 8
s Ictidomys_tridecemlineatus.JH393364.1                     387311 12 +   7955117 --aaacaaaa-----------------------tat----a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 8
s Indri_indri.k141_2415743                                    2879 10 +     11955 ATG----AAT-----------------------TGT----G
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10489 10 -     16823 ACA----AAA-----------------------CAT----T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 8
s Kogia_breviceps.KogBre_flattened_line_3970                 72332 10 -     97402 ACA----AAA-----------------------CAT----T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 5
s Lagothrix_lagothricha.k141_246028                          43720 10 +    110728 ACA----AAA-----------------------CAT----G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    32617 10 -     49555 ata----aaa-----------------------gat----g
i Lasiurus_borealis.LasBor_scaffold_26245                I 136 I 9
s Lemur_catta.scaffold_24                                 14759972 10 +  30322482 ACG----AAA-----------------------CGT----G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4623 10 -     13097 ACA----AAA-----------------------CAT----G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4377 10 +      5940 ACA----AAA-----------------------CAT----G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4207 10 -      5717 ACA----AAA-----------------------CAT----G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10590 10 -     11567 ACA----AAA-----------------------CAT----G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11971 10 -     12945 ACA----AAA-----------------------CAT----G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9486 10 +     29618 AGA----AAG-----------------------CGT----G
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9482 10 +     31569 AGA----AAG-----------------------CGT----G
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9492 10 +     24756 AGA----AAG-----------------------CTT----G
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9492 10 +     16388 AGA----AAG-----------------------CGT----G
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813967 10 -   3914936 ACA----AAA-----------------------CAT----G
i Leptonychotes_weddellii.KB714746.1                     C 0 I 8
s Lepus_americanus.LepAme_scaffold_56121                     18336 10 +     24238 ACG----AAG-----------------------TAT----A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 8
s Lipotes_vexillifer.KE559953.1                             341674 10 +    662738 ACA----AAA-----------------------CAT----T
i Lipotes_vexillifer.KE559953.1                          C 0 I 8
s Lophocebus_aterrimus.ctg367                               334637 10 -   1826925 ACA----AAA-----------------------CAT----G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39084659 10 +  43346337 aaa----aaa-----------------------cat----g
i Loxodonta_africana.GL010049.1                          I 2368 I 8
s Lycaon_pictus.CM007581.1                                41615129 10 +  59628241 CCC----AAA-----------------------CAT----G
i Lycaon_pictus.CM007581.1                               C 0 I 8
s Macaca_arctoides.k141_1757516                              46031  5 -     61512 ---------A-----------------------CAT----G
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373693  5 -  60120075 ---------A-----------------------CAT----G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25956 10 +     30207 ACA----AAA-----------------------CAT----G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             794 10 -      5035 ACA----AAA-----------------------CAT----G
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25909 10 +     30527 ACA----AAA-----------------------CAT----G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37085 10 -     50087 ACA----AAA-----------------------CAT----G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46829 10 +     51645 ACA----AAA-----------------------CAT----G
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416032 10 - 187317192 ACA----AAA-----------------------CAT----G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400262 10 +  25927173 ACA----AAA-----------------------CAT----G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49434 10 -     62418 ACA----AAA-----------------------CAT----G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1970  5 +     14901 ---------A-----------------------CAT----G
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45906 10 +     59329 ACA----AAA-----------------------CAT----G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271814 10 +    668171 ACA----AAA-----------------------CAT----G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   457  5 -      5049 ---------A-----------------------CAT----G
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3612 10 +     17132 ACA----AAA-----------------------CAT----G
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223690 10 -    270270 aga----aaa-----------------------cat----g
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 8
s Mandrillus_leucophaeus.scaffold280                        323102 10 +  24302211 ACA----AAA-----------------------CAT----G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357933 10 -    752769 ACA----AAA-----------------------CAT----G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674020 10 -    737560 aca----aaa-----------------------cat----g
i Manis_javanica.JSZB01003497.1                          C 0 I 8
s Manis_pentadactyla.KN006162.1                             221316 10 +    317179 aca----aaa-----------------------cat----g
i Manis_pentadactyla.KN006162.1                          C 0 I 8
s Marmota_marmota.CZRN01000018.1                           7501529 12 +  40650429 --aaacaaaa-----------------------tat----a
i Marmota_marmota.CZRN01000018.1                         C 0 I 8
s Megaderma_lyra.MegLyr_scaffold_4542                       150865 10 +    207569 ATA----AAA-----------------------CAA----A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 8
s Mellivora_capensis.MelCap_flattened_line_19308             26690  9 -     74585 ACA-----AA-----------------------CAT----G
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 8
s Meriones_unguiculatus.MerUng_scaffold_7390                 50666  9 -    140813 ACA-----AA-----------------------TGG----A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 8
s Mesocricetus_auratus.KB708134.1                         17429725  9 +  29670104 ATA-----AA-----------------------TGG----A
i Mesocricetus_auratus.KB708134.1                        C 0 I 8
s Mesoplodon_bidens.MesBid_scaffold_6114                     87958 10 +     93471 ACA----AAA-----------------------CAT----T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 8
s Mico_argentatus.k141_582562                                10757 10 +     17804 ACA----AAA-----------------------CAT----C
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11257 10 -     12984 ACA----AAA-----------------------CAT----C
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19573 10 -     26561 ACA----AAA-----------------------CAT----C
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985322 10 +  93316391 ACA----AAA-----------------------TGT----G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47265  2 +    145209 -----------------------------------A----G
i Microgale_talazaci.MicTal_scaffold_6613                I 489 I 8
s Micronycteris_hirsuta.MicHir_scaffold_2233                185549 10 +    200668 ATA----AAA-----------------------TGT----G
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 8
s Microtus_ochrogaster.CM001695.1                         15962932  9 +  27267610 aca-----aa-----------------------tga----a
i Microtus_ochrogaster.CM001695.1                        C 0 I 8
s Miniopterus_natalensis.LDJU01000034.1                    6363705 10 -   8254450 ata----aaa-----------------------cat----a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 8
s Miniopterus_schreibersii.MinSch_scaffold_23309             42612 10 -     48117 ata----aaa-----------------------cat----a
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 8
s Miopithecus_ogouensis.k141_1534655                         23136 10 -     27822 ACA----AAA-----------------------CAT----G
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8978 10 +     27589 ACA----AAA-----------------------CAT----G
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 8
s Mirza_zaza.k141_766280                                     53105 10 -     62432 ACA----AAA-----------------------TGT----G
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360063 10 +    437263 ACA----AAA-----------------------CAT----T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 8
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179781 10 +    366855 ata----aac-----------------------tgt----g
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 8
s Moschus_moschiferus.MosMos_scaffold_13123                  26026 10 -     82753 ACA----AAG-----------------------CAT----T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 8
s Mungos_mungo.MunMun_flattened_line_18455                   19016  3 -     63510 ACC--------------------------------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 5
s Murina_feae.MurFea_scaffold_17764                          39683 10 +     47283 ATA----AAG-----------------------CAT----G
i Murina_feae.MurFea_scaffold_17764                      C 0 I 8
s Mus_caroli.LT608237.1                                   35593644  9 + 120012414 aca-----aa-----------------------tgg----a
i Mus_caroli.LT608237.1                                  C 0 I 8
s Mus_musculus.chr8                                       41688033  9 + 129401213 ACA-----AA-----------------------TGG----A
i Mus_musculus.chr8                                      C 0 I 8
s Mus_spretus.CM004101.1                                  39497327  9 + 130317789 aca-----aa-----------------------tgg----a
i Mus_spretus.CM004101.1                                 C 0 I 8
s Mustela_putorius.JH418006.1                             14355613  8 +  14710649 ACA-----AA------------------------AT----G
i Mustela_putorius.JH418006.1                            C 0 I 8
s Myocastor_coypus.MyoCoy_scaffold_15261                     63571 10 +     67721 ACA----AAA-----------------------TAT----A
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 8
s Myotis_brandtii.KE162005.1                               9793930  9 +  10118263 ata----aag-----------------------ca-----g
i Myotis_brandtii.KE162005.1                             C 0 I 8
s Myotis_davidii.KB100139.1                                4388102 10 +   6019432 ata----aag-----------------------cat----g
i Myotis_davidii.KB100139.1                              C 0 I 8
s Myotis_lucifugus.GL429869.1                               383890 10 +   4330536 ata----aag-----------------------cat----g
i Myotis_lucifugus.GL429869.1                            C 0 I 8
s Myotis_myotis.MyoMyo_scaffold_66571                         2699 10 +     18357 ata----aag-----------------------cat----g
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 8
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120278 10 +    130748 ACA----AAA-----------------------CAT----G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 10 I 8
s Nannospalax_galili.KL204047.1                             946805 10 +   3037898 aca----aaa-----------------------tgt----a
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_1350636                              29785 10 +     34575 ACA----AAA-----------------------CAT----G
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232739 10 -   7148211 ACA----AAA-----------------------CAT----T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 8
s Noctilio_leporinus.NocLep_scaffold_7894                   128746 10 -    149072 aga----aaa-----------------------cat----g
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 8
s Nomascus_annamensis.k141_1771965                           54208 10 -    132029 ACA----AAA-----------------------CAT----G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10303 10 -     16345 ACA----AAA-----------------------CAT----G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16188 10 +     22201 ACA----AAA-----------------------CAT----G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414409 10 -  22158432 ACA----AAA-----------------------CAT----G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26586 10 -     54323 ACA----AAA-----------------------CAT----G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198725 10 +   9404916 CCC----AAA-----------------------CAT----G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 8
s Ochotona_princeps.JH802162.1                             2557393 10 -   3988456 AGA----AAG-----------------------TAT----A
i Ochotona_princeps.JH802162.1                           C 0 I 8
s Octodon_degus.JH651603.1                                11055527 10 -  11899542 aaa----aaa-----------------------tat----a
i Octodon_degus.JH651603.1                               C 0 I 8
s Odobenus_rosmarus.KB229312.1                             1452184 10 +   2017862 aca----aaa-----------------------cat----g
i Odobenus_rosmarus.KB229312.1                           C 0 I 8
s Odocoileus_virginianus.KZ100018.1                         436794 10 -    630418 CCA----AAG-----------------------CAT----T
i Odocoileus_virginianus.KZ100018.1                      C 0 I 8
s Okapia_johnstoni.LVCL01S0005463.1                          14787 10 +    150152 ACA----AAG-----------------------CAT----T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 6
s Ondatra_zibethicus.OndZib_scaffold_7387                    93284  9 -    140218 ACA-----AA-----------------------TGA----A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 8
s Onychomys_torridus.OnyTor_scaffold_28377                    4164  9 -     41509 ACA-----AG-----------------------AGG----A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 8
s Orcinus_orca.KB316932.1                                  8103131 10 +  10937097 aca----aaa-----------------------cat----T
i Orcinus_orca.KB316932.1                                C 0 I 8
s Orycteropus_afer.OryAfe_flattened_line_2034494               261 30 -       302 TGA----AAAACAAAAA-CAAAAACAAAATATA--T----G
i Orycteropus_afer.OryAfe_flattened_line_2034494         I 1 I 8
s Oryctolagus_cuniculus.CM000791.1                       107104130 10 - 174332312 ACA----AGG-----------------------TAT----A
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 8
s Otocyon_megalotis.JAEUCK010005147.1                        39770 10 +    559221 CCC----AAA-----------------------CAT----T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 8
s Ovis_aries.CM001607.2                                   26404698 10 -  44047080 ACA----AAG-----------------------CAT----T
i Ovis_aries.CM001607.2                                  C 0 I 8
s Ovis_canadensis.OviCan_scaffold_67953                       5217 10 +     17875 ACA----AAG-----------------------CAT----T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 8
s Pan_troglodytes.CM009242.2                               1473302 10 - 189151597 ACA----AAA-----------------------CAT----G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   24995 10 -    230217 ACA----AGA-----------------------CAG----G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 8
s Panthera_pardus.KV860321.1                              18462321 10 -  18783137 ACA----AGA-----------------------CAG----G
i Panthera_pardus.KV860321.1                             C 0 I 8
s Panthera_tigris.KE722367.1                               3972980 10 +   8748460 ACA----AGA-----------------------CAG----G
i Panthera_tigris.KE722367.1                             C 0 I 8
s Pantholops_hodgsonii.KE114653.1                          1616226 10 +   2937107 ACA----AAG-----------------------CAT----T
i Pantholops_hodgsonii.KE114653.1                        C 0 I 8
s Papio_anubis.CM001495.2                                   243934 10 - 183742232 ACA----AAA-----------------------CAT----G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10396 10 +     21308 ACA----AAA-----------------------CAT----G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292969 10 -  20919399 ACA----AAA-----------------------CAT----G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23044 10 -     27687 ACA----AAA-----------------------CAT----G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16190 10 +     16796 ACA----AAA-----------------------CAT----G
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23001 10 -     23640 ACA----AAA-----------------------CAT----G
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15593 10 +     78924 ACA----AAA-----------------------TAG----G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 8
s Perognathus_longimembris.PerPac_flattened_line_89005        2320 10 +      9367 AGG----AAG-----------------------TAT----A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 8
s Peromyscus_maniculatus.KI615324.1                         247363  9 +  18517816 TCA-----GG-----------------------GGG----A
i Peromyscus_maniculatus.KI615324.1                      C 0 I 8
s Petromus_typicus.PetTyp_scaffold_17301                     32448 10 -     56120 ACA----AAA-----------------------TAT----A
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 8
s Phocoena_phocoena.PhoPho_flattened_line_24159               4657 10 -     63832 ACA----AAA-----------------------CAT----T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 8
s Piliocolobus_badius.k141_2704958                            3216 10 +     55023 ACA----AAA-----------------------CAT----G
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2754 10 -     89929 ACA----AAG-----------------------CAT----G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3344 10 +     40849 ACA----AAG-----------------------CAT----G
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255018 10 +  14605196 ACA----AAG-----------------------CAT----G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4519 10 +     22231 ATA----CAG-----------------------AGT----G
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 8
s Pithecia_albicans.k141_1239476                             65341 10 +    207309 ACA----AAA-----------------------CAT----G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6433 10 -     25401 ACA----AAA-----------------------CAT----G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32177 10 +     58159 ACA----AAA-----------------------CAT----G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32453 10 +     63561 ACA----AAA-----------------------CAT----G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32213 10 +     51148 ACA----AAA-----------------------CAT----G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557183 10 -   4542175 ACA----AAA-----------------------CAT----G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32197 10 +     51125 ACA----AAA-----------------------CAT----G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1674 10 +     19503 ACA----AAA-----------------------CAT----T
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 8
s Plecturocebus_bernhardi.k141_2549090                        8608 10 +     39866 ACA----AAA-----------------------CAT----G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3690 10 -      9282 ACA----AAA-----------------------CAT----G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43094 10 -     87950 ACA----AAA-----------------------CAT----G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43490 10 -     88961 ACA----AAA-----------------------CAT----G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8186 10 -     39403 ACA----AAA-----------------------CAT----G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43137 10 +     87928 ACA----AAA-----------------------CAT----G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8185 10 -     60166 ACA----AAA-----------------------CAT----G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15122 10 -     67232 ACA----AAA-----------------------CAT----G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43038 10 -     90634 ACA----AAA-----------------------CAT----G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44505 10 +     89403 ACA----AAA-----------------------CAT----G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178411 10 - 189387572 aca----aaa-----------------------cat----g
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193228 10 -   9816681 ACA----AAA-----------------------CAT----G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28365 10 +     69807 ACA----AAA-----------------------CAT----G
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45546 10 -     80239 ACA----AAA-----------------------CAT----G
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 3874 12 +      7663 AAA----AAAA------------------T---CAT----A
i Procavia_capensis.ProCapCap_scaffold_165387            I 2396 I 8
s Prolemur_simus.MPIZ01000396.1                            1983120 10 +   4620579 ATG----AAA-----------------------CGT----G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566630 10 -   2598838 ACG----AAG-----------------------TGT----G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4268 10 -      7103 ACG----AAG-----------------------TGT----G
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4865 10 -     11706 ACG----AAG-----------------------TGT----G
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8603 10 -     30655 ACG----AAG-----------------------TGT----G
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34916 10 +     46564 ACG----AAG-----------------------TGT----G
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95195 10 -     98465 ACG----AAG-----------------------TGT----G
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8834 10 +     35169 ACG----AAG-----------------------TGT----G
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37966  8 +     52041 -CA-----AA-----------------------TGG----A
i Psammomys_obesus.NESX01036366.1                        C 0 I 8
s Pteronotus_parnellii.KE847780.1                            52674 10 -     66298 ata----aaa-----------------------cgt----g
i Pteronotus_parnellii.KE847780.1                        C 0 I 8
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5186  9 -     18639 ACA-----TA-----------------------CAT----G
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 8
s Pteropus_alecto.KB030862.1                               5841263 10 -  28871421 aga----aaa-----------------------cat----t
i Pteropus_alecto.KB030862.1                             C 0 I 8
s Pteropus_vampyrus.KN525825.1                             3537778 10 -   4952924 aga----aaa-----------------------tat----g
i Pteropus_vampyrus.KN525825.1                           C 0 I 8
s Puma_concolor.QAVW01001104.1                            18099638 10 +  38429054 ACG----AGA-----------------------CAG----G
i Puma_concolor.QAVW01001104.1                           C 0 I 8
s Pygathrix_cinerea.k141_1153803                             27741 10 +     91421 ACA----AAA-----------------------CAT----G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154225 10 -   7812017 ACA----AAA-----------------------CAT----G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8598 10 +     72585 ACA----AAA-----------------------CAT----G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53711 10 +     55069 ACA----AAG-----------------------CAT----T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 8
s Rattus_norvegicus.chr16                                 37023249  9 -  90668790 ACC-----AA-----------------------TGG----A
i Rattus_norvegicus.chr16                                C 0 I 8
s Rhinolophus_sinicus.LVEH01000134.1                       2915243 10 +   3329780 ata----aaa-----------------------tgt----g
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 8
s Rhinopithecus_bieti.k119_778604                             2319 10 +      7119 ACA----AAA-----------------------CAT----G
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122935 10 + 195417433 ACA----AAA-----------------------CAT----G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237161 10 -   7961872 ACA----AAA-----------------------CAT----G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75308 10 -    116970 AGA----AAA-----------------------CAC----G
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 8
s Saguinus_bicolor.k141_1429097                               4498 10 +     27962 ACA----AAA-----------------------CAT----G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4392 10 +      6077 ACA----AAA-----------------------CAT----G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4482 10 +      5971 ACA----AAA-----------------------CAT----G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4403 10 +      5932 ACA----AAA-----------------------CAT----G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2745 10 -      4390 ACA----AAA-----------------------CAT----G
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392182 10 - 209938924 ACA----AAA-----------------------CAT----G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4351 10 +      5979 ACA----AAA-----------------------CAT----G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                921 10 -     22275 ACA----AAA-----------------------CAT----G
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8386 10 +     16473 ACA----AAG-----------------------CAT----T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 8
s Saimiri_boliviensis.NW_024100920.1                       1109517 10 + 121099817 ACA----AAA-----------------------CCT----G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31084 10 -     47369 ACA----AAA-----------------------CCT----G
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31470 10 -     79414 ACA----AAA-----------------------CCT----G
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28161 10 -     34454 ACA----AAA-----------------------CCT----G
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15562 10 -     22428 ACA----AAA-----------------------CCT----G
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30716 10 -     47109 ACA----AAA-----------------------CCT----G
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238762 10 +   5703754 ACA----AAA-----------------------CAT----G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8352 10 +     21866 ACA----AAA-----------------------CAT----G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116410 10 +    313613 ATA----AAA-----------------------CAT----G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 8
s Semnopithecus_entellus.k141_158471                         26060 10 +     27374 ACA----AAA-----------------------CAT----G
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29572 10 +     58920 ACA----AAA-----------------------CAT----G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16070 10 -     45317 ACA----AAA-----------------------CAT----G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23728 10 -     42441 ACA----AAA-----------------------CAT----G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26406 10 -     29113 ACA----AAA-----------------------CAT----G
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29481 10 -     48123 ACA----AAA-----------------------CAT----G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49744  9 +     77746 AGA-----AA-----------------------TGG----A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 8
s Solenodon_paradoxus.SolPar_flattened_line_126            1864680 10 -   1910179 ATA----AAA-----------------------CTA----G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 7
s Sorex_araneus.JH798187.1                                 4671804  1 +  18376816 -------a---------------------------------
i Sorex_araneus.JH798187.1                               C 0 I 9
s Spermophilus_dauricus.KZ294078.1                         1868889 12 +   3870691 --aaacaaaa-----------------------tat----a
i Spermophilus_dauricus.KZ294078.1                       C 0 I 8
s Spilogale_gracilis.SpiGra_flattened_line_13525              7270 10 -     97271 ACA----AAA-----------------------CAT----A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 8
s Suricata_suricatta.SurSur_flattened_line_6629             125416  3 +    196729 ACA--------------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 5
s Sus_scrofa.CM000828.4                                    6644291 10 +  69701581 aca----aaa-----------------------aat----t
i Sus_scrofa.CM000828.4                                  C 0 I 8
s Symphalangus_syndactylus.tarseq_199                       391668 10 +   1523678 GCA----AAA-----------------------CAT----G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14840 10 +     22964 aga----aaa-----------------------cat----g
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 8
s Tamandua_tetradactyla.TamTet_scaffold_224794                3269 10 +      5583 ACA----AAA-----------------------CAT----G
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 10 I 8
s Tapirus_indicus.TapInd_scaffold_7432                      192143 10 +    199430 ACA----AAT-----------------------CAT----G
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 8
s Tapirus_terrestris.TapTer_scaffold_755                    106113 10 -    539355 ACA----AAT-----------------------CAT----G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 8
s Tarsius_lariang.k141_1733899                                1180 10 +      9917 ACA----AAA-----------------------CAT----A
i Tarsius_lariang.k141_1733899                           C 0 I 8
s Tarsius_wallacei.k141_226975                                7978 10 +     20590 ACA----AAA-----------------------CAT----G
i Tarsius_wallacei.k141_226975                           C 0 I 8
s Theropithecus_gelada.CM009954.1                           353920 10 - 186847797 ACA----AAA-----------------------CAT----G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24607 10 -     33621 ATA----AAA-----------------------CAT----A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 8
s Tolypeutes_matacus.TolMat_scaffold_31955                   20270 10 -     31044 CTG----AAA-----------------------CAT----A
i Tolypeutes_matacus.TolMat_scaffold_31955               I 7 I 8
s Tonatia_saurophila.TonSau_scaffold_294                    480667 10 -    610378 ATA----ACA-----------------------TGT----G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 8
s Trachypithecus_auratus.k141_1189070                        21605 10 +     26378 ACA----AAA-----------------------CAT----G
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34281 10 -     78344 ACA----AAA-----------------------CAT----G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20930 10 +     25722 ACA----AAA-----------------------CAT----G
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29237 10 -     62838 ACA----AAA-----------------------CAT----G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29281 10 +     46913 ACA----AAA-----------------------CAT----G
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10090 10 -     28527 ACA----AAA-----------------------CAT----G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31172 10 -     64340 ACA----AAA-----------------------CAT----G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29210 10 -     63452 ACA----AAA-----------------------CAT----G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10657 10 +     22490 ACA----AAA-----------------------CAT----G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4080 10 -      6147 ACA----AAA-----------------------CAT----G
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        10993 10 -     13050 ACA----AAA-----------------------CAT----G
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256223 10 -   6242583 ACA----AAA-----------------------CAT----G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2251 10 +     19340 ACA----AAA-----------------------CAT----G
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   173999 10 -    200418 ACA----AAA-----------------------CGT----T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 8
s Trichechus_manatus.JH594705.1                            6481425 10 -  10818551 AAG----AAA-----------------------CAT----T
i Trichechus_manatus.JH594705.1                          I 1 I 8
s Tupaia_chinensis.KB320699.1                              1834917  7 -   4065304 A-------AG-----------------------TAT----G
i Tupaia_chinensis.KB320699.1                            C 0 I 8
s Tupaia_tana.TupTan_flattened_line_394                       8934  7 -     70247 A-------AG-----------------------TAT----G
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 8
s Tursiops_truncatus.MRVK01000835.1                       17366244 10 -  33153633 ACA----AAA-----------------------CAT----T
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 8
s Uropsilus_gracilis.UroGra_scaffold_46687                    4137 10 -     21056 ACA----AAA-----------------------AGT----G
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 8
s Ursus_maritimus.KK499267.1                                182351 10 +   5085361 aca----aaa-----------------------cag----g
i Ursus_maritimus.KK499267.1                             C 0 I 286
s Varecia_rubra.k141_787544                                  25772 10 -     30710 ACG----AAA-----------------------CGT----G
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24679 10 -    147434 ACG----AAA-----------------------CGT----G
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76829  9 +   5488506 ACA----AAA-----------------------CGT-----
i Vicugna_pacos.KN270157.1                               C 0 I 6
s Vulpes_lagopus.VulLag_flattened_line_12041                105491 10 -    112863 CCC----AAA-----------------------CAT----G
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 8
s Xerus_inauris.XerIna_scaffold_2302                        174685  8 -    224448 --A----AAA-----------------------TAT----A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 8
s Zalophus_californianus.ZalCal_flattened_line_17732         29392 10 -     86975 aca----aaa-----------------------cat----g
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 8
s Zapus_hudsonius.ZapHud_scaffold_286923                       514 10 -      1899 TTA----AAA-----------------------TGT----A
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 I 8
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1528 10 +      2126 ACA----AAA-----------------------CAT----T
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 I 8
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Perodicticus_potto.k141_1854441                            19967  0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          27598  0 +     31479 C
e Otolemur_garnettii.GL873799.1                             354272  0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        41268  0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566099  0 - 199412804 C
e Nycticebus_coucang.k141_1296080                             1322  0 -      9413 C
e Nycticebus_bengalensis.LG01                             93638719  0 + 196305487 C
e Loris_tardigradus.ctg83                                  5045489  0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                           11819  0 +     19643 C
e Galagoides_demidoff.k141_561628                            21738  0 -     32986 C
e Galago_senegalensis.k141_991736                             9667  0 +     22493 C
e Galago_moholi.ctg3793                                     126122  0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       20758  0 -     45910 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             84009  0 -     86153 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Jaculus_jaculus.JH725527.1                               1240343  1 +   9596543 I
e Graphiurus_murinus.GraMur_scaffold_10447                    2453  0 -     78134 C
e Glis_glis.GliGli_scaffold_33859                            34954  0 -     36801 C
e Allactaga_bullata.AllBul_scaffold_20030                    18564  1 -     61208 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5968 1 +     36723 G
s Acinonyx_jubatus.LLWD01001279.1                           813398 1 +   1699592 T
i Acinonyx_jubatus.LLWD01001279.1                        I 8 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25646 1 +     63021 G
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 8 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415855 1 +  29979442 g
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 8 C 0
s Ailurus_fulgens.LNAC01001112.1                            216197 1 +    347723 g
i Ailurus_fulgens.LNAC01001112.1                         I 8 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18565 1 -     61208 G
i Allactaga_bullata.AllBul_scaffold_20030                I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48606 1 +     53615 G
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           637 1 +     13857 G
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17188 1 -     21945 G
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18873 1 +     32033 G
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72714 1 -     84148 G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44953 1 -     78289 G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44392 1 +     55831 G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42842 1 -     64179 G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24476 1 -     24835 G
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41467 1 +     45454 G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47116 1 +     70886 G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9289 1 +     30854 G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33423 1 +     42133 G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585849 1 +   2318259 G
i Ammotragus_lervia.NIVO01071767.1                       I 8 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177648 1 -    412891 g
i Anoura_caudifer.AnoCau_scaffold_1412                   I 8 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50956 1 -     68529 G
i Antilocapra_americana.AntAmePen_scaffold_21030         I 8 C 0
s Aotus_azarae.k141_887050                                    1680 1 +     17741 G
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2305 1 -     15923 G
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672587 1 +   5030052 G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2581 1 -     16391 G
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2140 1 -     17186 G
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16659 1 -     32367 G
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 8 C 0
s Arctocebus_calabarensis.k141_1364444                       20758 1 -     45910 G
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5914 1 -     15198 G
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 8 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275177 1 +  21539123 G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11345 1 +     48076 G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6480 1 -     28759 G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34034 1 +     44353 G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49405 1 -     71267 G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23463 1 -     33135 G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6745 1 +     11645 G
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6753 1 -     19611 G
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963998 1 -  23207421 G
i Balaenoptera_acutorostrata.KI537508.1                  I 8 C 0
s Balaenoptera_bonaerensis.DF411050.1                          498 1 -     25979 G
i Balaenoptera_bonaerensis.DF411050.1                    I 8 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86857 1 +    124022 G
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 8 C 0
s Bison_bison.KN261452.1                                     22399 1 +    288883 G
i Bison_bison.KN261452.1                                 I 8 C 0
s Bos_indicus.CM003047.1                                  20356789 1 +  48749331 G
i Bos_indicus.CM003047.1                                 I 8 C 0
s Bos_mutus.JH880303.1                                      755353 1 +   1948126 G
i Bos_mutus.JH880303.1                                   I 8 C 0
s Bos_taurus.CM000203.6                                   27545495 1 -  45695690 G
i Bos_taurus.CM000203.6                                  I 8 C 0
s Bubalus_bubalis.KI419123.1                               1530510 1 -   4408762 G
i Bubalus_bubalis.KI419123.1                             I 8 C 0
s Cacajao_ayresi.k141_96119                                   8353 1 +     28062 G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43647 1 -     91139 G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21173 1 +     95584 G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21086 1 +    119600 G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10660 1 +     18648 G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10195 1 -     13885 G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2265 1 -      8861 G
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454657 1 + 189096842 G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2180 1 +      8664 G
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631513 1 +  17673402 G
i Camelus_bactrianus.KN276810.1                          I 8 C 0
s Camelus_dromedarius.KN272107.1                           4665799 1 +   7040546 G
i Camelus_dromedarius.KN272107.1                         I 8 C 0
s Camelus_ferus.KB017975.1                                 1209459 1 +   1652518 G
i Camelus_ferus.KB017975.1                               I 8 C 0
s CanFam4.chr16                                           42505878 1 +  60362399 G
i CanFam4.chr16                                          I 8 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9514 1 -     23171 G
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 8 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222857 1 +   9314153 G
i Canis_lupus_dingo.QKWQ01000480.1                       I 8 C 0
s Canis_lupus_familiaris.chr16                            41615992 1 +  59632846 G
i Canis_lupus_familiaris.chr16                           I 8 C 0
s Canis_lupus_orion.HG994398.1                            45107573 1 -  63665305 G
i Canis_lupus_orion.HG994398.1                           I 8 C 0
s Capra_aegagrus.CM003241.1                               27409578 1 -  46296322 G
i Capra_aegagrus.CM003241.1                              I 8 C 0
s Capra_hircus.CM004588.1                                 26591852 1 +  44709034 G
i Capra_hircus.CM004588.1                                I 8 C 0
s Capromys_pilorides.CapPil_scaffold_762519                     18 1 -      1607 G
i Capromys_pilorides.CapPil_scaffold_762519              I 8 C 0
s Carlito_syrichta.NW_007259797.1                           270965 1 +    496798 G
i Carlito_syrichta.NW_007259797.1                        I 8 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                770 1 +      9923 G
i Carollia_perspicillata.CarPer_scaffold_107871          I 8 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28172 1 -     39886 G
i Castor_canadensis.CasCan_scaffold_39952                I 11 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80052 1 -    217609 G
i Catagonus_wagneri.CatWag_scaffold_2839                 I 8 C 0
s Cavia_aperea.AVPZ01000300.1                              4996902 1 +  23392119 G
i Cavia_aperea.AVPZ01000300.1                            I 8 C 0
s Cavia_porcellus.DS562891.1                               5000343 1 +  23407841 G
i Cavia_porcellus.DS562891.1                             I 8 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63424 1 -     66877 G
i Cavia_tschudii.CavTsc_scaffold_23560                   I 8 C 0
s Cebuella_niveiventris.k141_592277                           5578 1 -     12580 G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43635 1 +     53515 G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373398 1 -  26074798 G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8452 1 -     34880 G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67548 1 -     89041 G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2925 1 -      5494 G
i Cephalopachus_bancanus.k141_1689090                    I 8 C 0
s Ceratotherium_simum.JH767749.1                          15492685 1 -  27778364 G
i Ceratotherium_simum.JH767749.1                         I 8 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19518 1 +     27315 G
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 8 C 0
s Cercocebus_atys.KQ010504.1                                141762 1 -   4669795 G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45505 1 +     47900 G
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            934 1 -     14410 G
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45318 1 -    148725 G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27520 1 -     40656 G
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7484 1 +     20796 G
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12602 1 -     17524 G
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28327 1 -     34525 G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12105 1 -     25376 G
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364699 1 -  39242232 G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270419 1 +  21565898 G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32787 1 -     45857 G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27688 1 -     32606 G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3850 1 +      8499 G
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26246 1 +     70610 G
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23207 1 +     36323 G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13194 1 -     19938 T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 8 C 0
s Cheirogaleus_major.k141_666340                             31119 1 -     33796 G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5636 1 -     15404 G
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9453 1 -     32913 G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19866 1 -     40346 G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20121 1 +    216457 G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19914 1 +     39636 G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239255 1 -   2543920 A
i Chinchilla_lanigera.JH722012.1                         I 8 C 0
s Chiropotes_albinasus.k141_1946120                           4510 1 +      5346 G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42984 1 -    112038 G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8555 1 +     34062 G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344108 1 +  18827391 G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10652 1 -     44032 G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305433 1 - 135778131 G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15324 1 +     15858 G
i Choloepus_didactylus.ChoDid_scaffold_70559             I 8 C 0
s Choloepus_hoffmanni.KN194906.1                            606899 1 -    839153 g
i Choloepus_hoffmanni.KN194906.1                         I 8 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2018 1 +      2406 G
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          I 8 C 0
s Colobus_angolensis.KN981557.1                             409838 1 -   2368649 G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379719 1 - 200372422 G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3276 1 -     84244 G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807724 1 +  53390261 G
i Condylura_cristata.JH655891.1                          I 8 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3278 1 -      8242 g
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 8 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44782 1 -     83289 G
i Cricetomys_gambianus.CriGam_scaffold_14425             I 8 C 0
s Cricetulus_griseus.LT883664.1                          213115362 1 - 224834208 G
i Cricetulus_griseus.LT883664.1                          I 8 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9880 1 +     12657 G
i Crocidura_indochinensis.CroInd_scaffold_77846          I 8 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4851 1 +     87169 G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 8 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645901 1 -   1526836 G
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 8 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18807 1 +     50838 T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 8 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4819 1 +     36344 G
i Cuniculus_paca.CunPac_flattened_line_7025              I 8 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28595 1 +     75252 G
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 8 C 0
s Dasypus_novemcinctus.JH564415.1                          2110550 1 -   2246927 G
i Dasypus_novemcinctus.JH564415.1                        I 8 C 0
s Daubentonia_madagascariensis.ctg71                        293055 1 +  12879189 G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632406 1 -  35494412 G
i Delphinapterus_leucas.KZ290073.1                       I 8 C 0
s Desmodus_rotundus.KZ672366.1                              330965 1 -   2620052 G
i Desmodus_rotundus.KZ672366.1                           I 8 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664969 1 -   1390856 G
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 8 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139762 1 -    198055 G
i Diceros_bicornis.DicBicMic_scaffold_5955               I 8 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99343 1 -    115145 G
i Dinomys_branickii.DinBra_scaffold_10381                I 8 C 0
s Dipodomys_ordii.KN672350.1                              18950985 1 -  37912305 G
i Dipodomys_ordii.KN672350.1                             I 8 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5911 1 -     10735 G
i Dipodomys_stephensi.DipSte_scaffold_89095              I 8 C 0
s Echinops_telfairi.JH980293.1                            62856040 1 - 111700974 G
i Echinops_telfairi.JH980293.1                           I 8 C 0
s Eidolon_helvum.AWHC01266696.1                               6741 1 +     19438 g
i Eidolon_helvum.AWHC01266696.1                          I 8 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240219 1 -    607251 G
i Elaphurus_davidianus.JRFZ01104969.1                    I 8 C 0
s Elephantulus_edwardii.JH947257.1                         1226194 1 +  10337057 C
i Elephantulus_edwardii.JH947257.1                       I 8 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31504 1 +    110024 A
i Ellobius_lutescens.LOEQ01008920.1                      I 8 C 0
s Ellobius_talpinus.LOJH01026522.1                           13475 1 +     18970 A
i Ellobius_talpinus.LOJH01026522.1                       I 8 C 0
s Enhydra_lutris.KZ291758.1                               24916608 1 +  41312741 G
i Enhydra_lutris.KZ291758.1                              I 8 C 0
s Eptesicus_fuscus.JH977646.1                             12579388 1 +  14770903 g
i Eptesicus_fuscus.JH977646.1                            I 8 C 0
s Equus_asinus.JREZ01000139.1                              3041883 1 -   4378816 G
i Equus_asinus.JREZ01000139.1                            I 8 C 0
s Equus_caballus.CM000403.2                               21375821 1 +  39960074 G
i Equus_caballus.CM000403.2                              I 8 C 0
s Equus_przewalskii.KK951119.1                              411728 1 -    498745 G
i Equus_przewalskii.KK951119.1                           I 23 C 0
s Erinaceus_europaeus.JH835339.1                           3666547 1 +   7059049 g
i Erinaceus_europaeus.JH835339.1                         I 8 C 0
s Erythrocebus_patas.Contig38                               263644 1 +  21539334 G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71612 1 -    133382 G
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 8 C 0
s Eubalaena_japonica.EubJap_flattened_line_247202             1159 1 -      1170 G
i Eubalaena_japonica.EubJap_flattened_line_247202        I 8 N 0
s Eulemur_albifrons.k141_51491                               15264 1 -     24895 G
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42974 1 -     70999 G
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86944 1 +    112731 G
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43507 1 +     68309 G
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53831 1 -     65740 G
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24463 1 -     75513 G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48658 1 -     97555 G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5382 1 +     30972 G
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43102 1 -     52037 G
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59505 1 -    111500 G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247307 1 - 206538554 T
i Felis_catus.CM001381.2                                 I 8 C 0
s Felis_catus_fca126.CM031415.1                          185117093 1 - 205367284 T
i Felis_catus_fca126.CM031415.1                          I 8 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28190 1 -     30238 T
i Felis_nigripes.FelNig_flattened_line_31944             I 8 C 0
s Fukomys_damarensis.KN121974.1                            2916900 1 -   3816255 A
i Fukomys_damarensis.KN121974.1                          I 8 C 0
s Galago_moholi.ctg3793                                     126122 1 -    137831 G
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9667 1 +     22493 G
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21738 1 -     32986 G
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1639 1 -     28519 G
i Galeopterus_variegatus.GalVar_scaffold_51812           I 8 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91922 1 -     95226 G
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 8 C 0
s Gorilla_beringei.k141_3358147                               6268 1 -      8343 G
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255283 1 - 186649187 G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15189 1 -     40692 G
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36591 1 +     49394 G
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61459 1 -     66874 G
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10333 1 -     42923 G
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17332 1 -     53142 G
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31283 1 -    327341 g
i Helogale_parvula.HelPar_flattened_line_2585            I 8 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9596 1 +     48891 G
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 8 C 0
s Heterocephalus_glaber.JH602082.1                         1932877 1 -  22651954 A
i Heterocephalus_glaber.JH602082.1                       I 8 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                3992 1 +      4291 G
i Heterohyrax_brucei.HetBruBak_scaffold_154059           I 8 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8107 1 -     36432 G
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 8 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552099 1 -   1711038 g
i Hipposideros_armiger.JXIK01000431.1                    I 8 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1537 1 -      2730 G
i Hipposideros_galeritus.HipGal_scaffold_164997          I 8 C 0
s Hoolock_leuconedys.ctg274                                    143292 1 -    630532 G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70448 1 +     83186 G
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 8 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72339 1 +    143317 A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 8 C 0
s Hylobates_agilis.k141_1155965                               6326 1 +     12352 G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13510 1 +     55766 G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053110 1 + 191637585 G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801988 1 +  11177569 G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7624 1 -    135385 G
i Hystrix_cristata.HysCri_scaffold_5660                  I 8 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387331 1 +   7955117 G
i Ictidomys_tridecemlineatus.JH393364.1                  I 8 C 0
s Indri_indri.k141_2415743                                    2889 1 +     11955 G
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10507 1 -     16823 C
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 8 C 0
s Jaculus_jaculus.JH725527.1                               1240344 1 +   9596543 G
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72347 1 -     97402 G
i Kogia_breviceps.KogBre_flattened_line_3970             I 5 C 0
s Lagothrix_lagothricha.k141_246028                          43730 1 +    110728 G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63360 1 -     65777 g
i Lasiurus_borealis.LasBor_scaffold_16567                I 18 I 20
s Lemur_catta.scaffold_24                                 14759982 1 +  30322482 G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4633 1 -     13097 G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4387 1 +      5940 G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4217 1 -      5717 G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10600 1 -     11567 G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11981 1 -     12945 G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9496 1 +     29618 G
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9492 1 +     31569 G
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9502 1 +     24756 G
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9502 1 +     16388 G
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813985 1 -   3914936 G
i Leptonychotes_weddellii.KB714746.1                     I 8 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18354 1 +     24238 G
i Lepus_americanus.LepAme_scaffold_56121                 I 8 C 0
s Lipotes_vexillifer.KE559953.1                             341692 1 +    662738 G
i Lipotes_vexillifer.KE559953.1                          I 8 C 0
s Lophocebus_aterrimus.ctg367                               334647 1 -   1826925 G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11819 1 +     19643 G
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045489 1 -   6120653 G
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39084677 1 +  43346337 g
i Loxodonta_africana.GL010049.1                          I 8 C 0
s Lycaon_pictus.CM007581.1                                41615147 1 +  59628241 G
i Lycaon_pictus.CM007581.1                               I 8 C 0
s Macaca_arctoides.k141_1757516                              46036 1 -     61512 G
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373698 1 -  60120075 G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25966 1 +     30207 G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             804 1 -      5035 G
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25919 1 +     30527 G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37095 1 -     50087 G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46839 1 +     51645 G
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416042 1 - 187317192 G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400272 1 +  25927173 G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49444 1 -     62418 G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1975 1 +     14901 G
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45916 1 +     59329 G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271824 1 +    668171 G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   462 1 -      5049 G
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3622 1 +     17132 G
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223708 1 -    270270 g
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 8 C 0
s Mandrillus_leucophaeus.scaffold280                        323112 1 +  24302211 G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357943 1 -    752769 G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674038 1 -    737560 g
i Manis_javanica.JSZB01003497.1                          I 8 C 0
s Manis_pentadactyla.KN006162.1                             221334 1 +    317179 g
i Manis_pentadactyla.KN006162.1                          I 8 C 0
s Marmota_marmota.CZRN01000018.1                           7501549 1 +  40650429 G
i Marmota_marmota.CZRN01000018.1                         I 8 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150883 1 +    207569 G
i Megaderma_lyra.MegLyr_scaffold_4542                    I 8 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26707 1 -     74585 G
i Mellivora_capensis.MelCap_flattened_line_19308         I 8 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50683 1 -    140813 G
i Meriones_unguiculatus.MerUng_scaffold_7390             I 8 C 0
s Mesocricetus_auratus.KB708134.1                         17429742 1 +  29670104 G
i Mesocricetus_auratus.KB708134.1                        I 8 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87976 1 +     93471 G
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 8 C 0
s Mico_argentatus.k141_582562                                10767 1 +     17804 G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11267 1 -     12984 G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19583 1 -     26561 G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985332 1 +  93316391 G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47275 1 +    145209 G
i Microgale_talazaci.MicTal_scaffold_6613                I 8 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185567 1 +    200668 G
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 8 C 0
s Microtus_ochrogaster.CM001695.1                         15962949 1 +  27267610 G
i Microtus_ochrogaster.CM001695.1                        I 8 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363723 1 -   8254450 g
i Miniopterus_natalensis.LDJU01000034.1                  I 8 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42630 1 -     48117 g
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 8 C 0
s Miopithecus_ogouensis.k141_1534655                         23146 1 -     27822 G
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8996 1 +     27589 G
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 8 C 0
s Mirza_zaza.k141_766280                                     53115 1 -     62432 G
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360081 1 +    437263 G
i Monodon_monoceros.MonMon_M_scaffold_103                I 8 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179799 1 +    366855 g
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 8 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26044 1 -     82753 G
i Moschus_moschiferus.MosMos_scaffold_13123              I 8 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19024 1 -     63510 G
i Mungos_mungo.MunMun_flattened_line_18455               I 5 C 0
s Murina_feae.MurFea_scaffold_17764                          39701 1 +     47283 A
i Murina_feae.MurFea_scaffold_17764                      I 8 C 0
s Mus_caroli.LT608237.1                                   35593661 1 + 120012414 G
i Mus_caroli.LT608237.1                                  I 8 C 0
s Mus_musculus.chr8                                       41688050 1 + 129401213 G
i Mus_musculus.chr8                                      I 8 C 0
s Mus_spretus.CM004101.1                                  39497344 1 + 130317789 G
i Mus_spretus.CM004101.1                                 I 8 C 0
s Mustela_putorius.JH418006.1                             14355629 1 +  14710649 G
i Mustela_putorius.JH418006.1                            I 8 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63589 1 +     67721 G
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 8 C 0
s Myotis_brandtii.KE162005.1                               9793947 1 +  10118263 g
i Myotis_brandtii.KE162005.1                             I 8 C 0
s Myotis_davidii.KB100139.1                                4388120 1 +   6019432 g
i Myotis_davidii.KB100139.1                              I 8 C 0
s Myotis_lucifugus.GL429869.1                               383908 1 +   4330536 g
i Myotis_lucifugus.GL429869.1                            I 8 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2717 1 +     18357 g
i Myotis_myotis.MyoMyo_scaffold_66571                    I 8 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120296 1 +    130748 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 8 C 0
s Nasalis_larvatus.k141_1350636                              29795 1 +     34575 G
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232757 1 -   7148211 G
i Neophocaena_asiaeorientalis.KZ687982.1                 I 8 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128764 1 -    149072 g
i Noctilio_leporinus.NocLep_scaffold_7894                I 8 C 0
s Nomascus_annamensis.k141_1771965                           54218 1 -    132029 G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10313 1 -     16345 G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16198 1 +     22201 G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414419 1 -  22158432 G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26596 1 -     54323 G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198743 1 +   9404916 G
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 8 C 0
s Nycticebus_bengalensis.LG01                             93638719 1 + 196305487 G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1322 1 -      9413 G
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566099 1 - 199412804 G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557411 1 -   3988456 A
i Ochotona_princeps.JH802162.1                           I 8 C 0
s Octodon_degus.JH651603.1                                11055545 1 -  11899542 G
i Octodon_degus.JH651603.1                               I 8 C 0
s Odobenus_rosmarus.KB229312.1                             1452202 1 +   2017862 G
i Odobenus_rosmarus.KB229312.1                           I 8 C 0
s Odocoileus_virginianus.KZ100018.1                         436812 1 -    630418 G
i Odocoileus_virginianus.KZ100018.1                      I 8 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          14803 1 +    150152 G
i Okapia_johnstoni.LVCL01S0005463.1                      I 6 I 203
s Ondatra_zibethicus.OndZib_scaffold_7387                    93301 1 -    140218 G
i Ondatra_zibethicus.OndZib_scaffold_7387                I 8 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4181 1 -     41509 G
i Onychomys_torridus.OnyTor_scaffold_28377               I 8 I 2
s Orcinus_orca.KB316932.1                                  8103149 1 +  10937097 C
i Orcinus_orca.KB316932.1                                I 8 C 0
s Orycteropus_afer.OryAfe_flattened_line_2034494               299 1 -       302 G
i Orycteropus_afer.OryAfe_flattened_line_2034494         I 8 N 0
s Oryctolagus_cuniculus.CM000791.1                       107104148 1 - 174332312 G
i Oryctolagus_cuniculus.CM000791.1                       I 8 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39788 1 +    559221 G
i Otocyon_megalotis.JAEUCK010005147.1                    I 8 C 0
s Otolemur_crassicaudatus.k141_649260                        41268 1 -     51505 G
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354272 1 +   1103335 G
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404716 1 -  44047080 G
i Ovis_aries.CM001607.2                                  I 8 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5235 1 +     17875 G
i Ovis_canadensis.OviCan_scaffold_67953                  I 8 C 0
s Pan_troglodytes.CM009242.2                               1473312 1 - 189151597 G
i Pan_troglodytes.CM009242.2                             C 0 I 20
s Panthera_onca.PanOnc_flattened_line_3271                   25013 1 -    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               I 8 C 0
s Panthera_pardus.KV860321.1                              18462339 1 -  18783137 T
i Panthera_pardus.KV860321.1                             I 8 C 0
s Panthera_tigris.KE722367.1                               3972998 1 +   8748460 T
i Panthera_tigris.KE722367.1                             I 8 C 0
s Pantholops_hodgsonii.KE114653.1                          1616244 1 +   2937107 G
i Pantholops_hodgsonii.KE114653.1                        I 8 C 0
s Papio_anubis.CM001495.2                                   243944 1 - 183742232 G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10406 1 +     21308 G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292979 1 -  20919399 G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23054 1 -     27687 G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16200 1 +     16796 G
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23011 1 -     23640 G
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15611 1 +     78924 G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 8 C 0
s Perodicticus_ibeanus.k141_1921260                          27598 1 +     31479 G
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            19967 1 -     24908 G
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2338 1 +      9367 G
i Perognathus_longimembris.PerPac_flattened_line_89005   I 8 C 0
s Peromyscus_maniculatus.KI615324.1                         247380 1 +  18517816 G
i Peromyscus_maniculatus.KI615324.1                      I 8 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32466 1 -     56120 A
i Petromus_typicus.PetTyp_scaffold_17301                 I 8 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4675 1 -     63832 G
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 8 C 0
s Piliocolobus_badius.k141_2704958                            3226 1 +     55023 G
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2764 1 -     89929 G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3354 1 +     40849 G
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255028 1 +  14605196 G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4537 1 +     22231 G
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 8 C 0
s Pithecia_albicans.k141_1239476                             65351 1 +    207309 G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6443 1 -     25401 G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32187 1 +     58159 G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32463 1 +     63561 G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32223 1 +     51148 G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557193 1 -   4542175 G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32207 1 +     51125 G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1692 1 +     19503 G
i Platanista_gangetica.PlaMin_flattened_line_83166       I 8 C 0
s Plecturocebus_bernhardi.k141_2549090                        8618 1 +     39866 G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3700 1 -      9282 G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43104 1 -     87950 G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43500 1 -     88961 G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8196 1 -     39403 G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43147 1 +     87928 G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8195 1 -     60166 G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15132 1 -     67232 G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43048 1 -     90634 G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44515 1 +     89403 G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178421 1 - 189387572 g
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193238 1 -   9816681 G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28375 1 +     69807 G
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45556 1 -     80239 G
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 3894 1 +      7663 G
i Procavia_capensis.ProCapCap_scaffold_165387            I 8 C 0
s Prolemur_simus.MPIZ01000396.1                            1983130 1 +   4620579 G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566640 1 -   2598838 G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4278 1 -      7103 G
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4875 1 -     11706 G
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8613 1 -     30655 G
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34926 1 +     46564 G
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95205 1 -     98465 G
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8844 1 +     35169 G
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37982 1 +     52041 G
i Psammomys_obesus.NESX01036366.1                        I 8 C 0
s Pteronotus_parnellii.KE847780.1                            52692 1 -     66298 g
i Pteronotus_parnellii.KE847780.1                        I 8 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5203 1 -     18639 G
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 8 C 0
s Pteropus_alecto.KB030862.1                               5841281 1 -  28871421 G
i Pteropus_alecto.KB030862.1                             I 8 C 0
s Pteropus_vampyrus.KN525825.1                             3537796 1 -   4952924 G
i Pteropus_vampyrus.KN525825.1                           I 8 C 0
s Puma_concolor.QAVW01001104.1                            18099656 1 +  38429054 T
i Puma_concolor.QAVW01001104.1                           I 8 C 0
s Pygathrix_cinerea.k141_1153803                             27751 1 +     91421 G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154235 1 -   7812017 G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8608 1 +     72585 G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53729 1 +     55069 G
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 8 C 0
s Rattus_norvegicus.chr16                                 37023266 1 -  90668790 G
i Rattus_norvegicus.chr16                                I 8 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915261 1 +   3329780 g
i Rhinolophus_sinicus.LVEH01000134.1                     I 8 C 0
s Rhinopithecus_bieti.k119_778604                             2329 1 +      7119 G
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122945 1 + 195417433 G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237171 1 -   7961872 G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75326 1 -    116970 G
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 8 C 0
s Saguinus_bicolor.k141_1429097                               4508 1 +     27962 G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4402 1 +      6077 G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4492 1 +      5971 G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4413 1 +      5932 G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2755 1 -      4390 G
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392192 1 - 209938924 G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4361 1 +      5979 G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                931 1 -     22275 G
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8404 1 +     16473 G
i Saiga_tatarica.SaiTat_scaffold_39512                   I 8 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109527 1 + 121099817 G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31094 1 -     47369 G
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31480 1 -     79414 G
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28171 1 -     34454 G
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15572 1 -     22428 G
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30726 1 -     47109 G
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238772 1 +   5703754 G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8362 1 +     21866 G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116428 1 +    313613 G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 8 C 0
s Semnopithecus_entellus.k141_158471                         26070 1 +     27374 G
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29582 1 +     58920 G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16080 1 -     45317 G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23738 1 -     42441 G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26416 1 -     29113 G
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29491 1 -     48123 G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49761 1 +     77746 A
i Sigmodon_hispidus.SigHis_scaffold_20193                I 8 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864697 1 -   1910179 G
i Solenodon_paradoxus.SolPar_flattened_line_126          I 7 C 0
s Sorex_araneus.JH798187.1                                 4671814 1 +  18376816 G
i Sorex_araneus.JH798187.1                               I 9 C 0
s Spermophilus_dauricus.KZ294078.1                         1868909 1 +   3870691 G
i Spermophilus_dauricus.KZ294078.1                       I 8 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7288 1 -     97271 G
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 8 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125424 1 +    196729 G
i Suricata_suricatta.SurSur_flattened_line_6629          I 5 C 0
s Sus_scrofa.CM000828.4                                    6644309 1 +  69701581 G
i Sus_scrofa.CM000828.4                                  I 8 C 0
s Symphalangus_syndactylus.tarseq_199                       391678 1 +   1523678 G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14858 1 +     22964 g
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 8 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3287 1 +      5583 T
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 8 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192161 1 +    199430 G
i Tapirus_indicus.TapInd_scaffold_7432                   I 8 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106131 1 -    539355 G
i Tapirus_terrestris.TapTer_scaffold_755                 I 8 C 0
s Tarsius_lariang.k141_1733899                                1198 1 +      9917 G
i Tarsius_lariang.k141_1733899                           I 8 C 0
s Tarsius_wallacei.k141_226975                                7996 1 +     20590 G
i Tarsius_wallacei.k141_226975                           I 8 C 0
s Theropithecus_gelada.CM009954.1                           353930 1 - 186847797 G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24625 1 -     33621 A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 8 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20288 1 -     31044 G
i Tolypeutes_matacus.TolMat_scaffold_31955               I 8 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480685 1 -    610378 G
i Tonatia_saurophila.TonSau_scaffold_294                 I 8 C 0
s Trachypithecus_auratus.k141_1189070                        21615 1 +     26378 G
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34291 1 -     78344 G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20940 1 +     25722 G
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29247 1 -     62838 G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29291 1 +     46913 G
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10100 1 -     28527 G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31182 1 -     64340 G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29220 1 -     63452 G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10667 1 +     22490 G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4090 1 -      6147 G
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11003 1 -     13050 G
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256233 1 -   6242583 G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2261 1 +     19340 G
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174017 1 -    200418 G
i Tragulus_javanicus.TraJav_scaffold_3462                I 8 C 0
s Trichechus_manatus.JH594705.1                            6481443 1 -  10818551 G
i Trichechus_manatus.JH594705.1                          I 8 C 0
s Tupaia_chinensis.KB320699.1                              1834932 1 -   4065304 G
i Tupaia_chinensis.KB320699.1                            I 8 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8949 1 -     70247 G
i Tupaia_tana.TupTan_flattened_line_394                  I 8 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366262 1 -  33153633 G
i Tursiops_truncatus.MRVK01000835.1                      I 8 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4155 1 -     21056 G
i Uropsilus_gracilis.UroGra_scaffold_46687               I 8 C 0
s Varecia_rubra.k141_787544                                  25782 1 -     30710 G
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24689 1 -    147434 A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76844 1 +   5488506 G
i Vicugna_pacos.KN270157.1                               I 6 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105509 1 -    112863 G
i Vulpes_lagopus.VulLag_flattened_line_12041             I 8 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174701 1 -    224448 G
i Xerus_inauris.XerIna_scaffold_2302                     I 8 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29410 1 -     86975 g
i Zalophus_californianus.ZalCal_flattened_line_17732     I 8 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       532 1 -      1899 A
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 8 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1546 1 +      2126 G
i Ziphius_cavirostris.ZipCav_flattened_line_504766       I 8 C 0
e Nannospalax_galili.KL204047.1                             946815 1 +   3037898 I
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Ursus_maritimus.KK499267.1                                182361 286 +   5085361 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             84009 0 -     86153 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Graphiurus_murinus.GraMur_scaffold_10447                    2453 0 -     78134 C
e Glis_glis.GliGli_scaffold_33859                            34954 0 -     36801 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       5969 20 +     36723 C--------C-TCTGAA-GAGAGTGTA---TGC
s Acinonyx_jubatus.LLWD01001279.1                           813399 20 +   1699592 C--------C-TCGGAA-GAACTTGTA---TCC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25647 18 +     63021 C--------CCTATCAG-GAGG---TA---TTA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415856 20 +  29979442 c--------c-tctgaa-gaacttgta---ttg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216198 20 +    347723 c--------c-tctgag-gaacttgga---ttg
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18566 16 -     61208 G--------C-TATGAA-GAGATTAT-------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48607 20 +     53615 C--------C-TCTGAA-GAGCGTGTA---TGC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           638 20 +     13857 C--------C-TCTGAA-GAGCGTGTA---TGC
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17189 20 -     21945 C--------C-TCTGAA-GAGCGTGTA---TGC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18874 20 +     32033 C--------C-TCTGAA-GAGCGTGTA---TGC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72715 20 -     84148 C--------C-TCTGAA-GAGCATGGA---TGC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44954 20 -     78289 C--------C-TCTGAA-GAGCACGGA---TGC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44393 20 +     55831 C--------C-TCTGAA-GAGCACGGA---TGC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42843 20 -     64179 C--------C-TCTGAA-GAGCACGGA---TGC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24477 20 -     24835 C--------C-TCTGAA-GAGCACGGA---TGC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41468 20 +     45454 C--------C-TCTGAA-GAGCACGGA---TGC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47117 20 +     70886 C--------C-TCTGTA-GAGCACGGA---TTC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9290 20 +     30854 C--------C-TCTGAA-GAGCACGGA---TGC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33424 20 +     42133 C--------C-TCTGAA-GAGCACGGA---TGC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585850 19 +   2318259 C--------C-TTTGAA-GAG-GTGTA---ATC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177649 20 -    412891 c--------c-cctgaa-gactttgta---ttc
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50957 19 -     68529 C--------C-TCTGAA-GAG-TTGTA---ATT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1681 20 +     17741 C--------C-TCTGAA-GAGCACAGA---TGC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2306 20 -     15923 C--------C-TCTGAA-GAGCACAGA---TGC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672588 20 +   5030052 C--------C-TCTGAA-GAGCACAGA---TGC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2582 20 -     16391 C--------C-TCTGAA-GAGCACAGA---TGC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2141 20 -     17186 C--------C-TCTGAA-GAGCACAGA---TGC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16660 20 -     32367 C--------C-TATGAA-GAGCTCATA---TTC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20759 20 -     45910 C--------C-TCTGAA-GAGTTTGGA---TTC
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5915 20 -     15198 C--------C-CCTGAA-GACTTTGTA---TTC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275178 20 +  21539123 C--------C-TCTGAA-GAGCACGGA---TGC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11346 20 +     48076 C--------C-TCTGAA-GAGCACGGA---TGC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6481 20 -     28759 C--------C-TCTGAA-GAGCACGGA---TGC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34035 20 +     44353 C--------C-TCTGAA-GAGCACGGA---TGC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49406 20 -     71267 C--------C-TCTGAA-GAGCACGGA---TGC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23464 20 -     33135 C--------C-TCTGAA-GAGCACGGA---TGC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6746 28 +     11645 CTATGCTGTC-TCTGAA-GGGCTTGGA---TTC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6754 28 -     19611 CTATGCTGTC-TCTGAA-GAGCTTGGA---TTC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7963999 20 -  23207421 C--------C-TCTGAA-GAGTTTGTA---ATC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          499 20 -     25979 C--------C-TCTGAA-GAGTTTGTA---ATC
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86858 19 +    124022 C--------C-TTTGAA-GAG-TTGTA---ATC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22400 19 +    288883 C--------C-TTTGAA-GAG-TTGTA---ATC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356790 19 +  48749331 C--------C-TTTGAA-GAG-TTGTA---ATC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755354 19 +   1948126 C--------C-TTTGAA-GAG-TTGTA---ATC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545496 19 -  45695690 C--------C-TTTGAA-GAG-TTGTA---ATC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530511 19 -   4408762 C--------C-TTTGAA-GAG-TTGTA---ATC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8354 20 +     28062 C--------C-TCTGAA-GAGCACGGA---TGC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43648 20 -     91139 C--------C-TCTGAA-GAGCACGGA---TGC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21174 20 +     95584 C--------C-TCTGAA-GAGCACGGA---TGC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21087 20 +    119600 C--------C-TCTGAA-GAGCACAGA---TGC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10661 20 +     18648 C--------C-TCCGAA-GAGCACGGA---TGC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10196 20 -     13885 C--------C-TCCGAA-GAGCACGGA---TGC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2266 20 -      8861 C--------C-TCCGAA-GAGCACGGA---TGC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454658 20 + 189096842 C--------C-TCCGAA-GAGCACGGA---TGC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2181 20 +      8664 C--------C-TCCGAA-GAGCACGGA---TGC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631514 20 +  17673402 C--------C-TCTGAA-GAGCTCATA---ATC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665800 20 +   7040546 C--------C-TCTGAA-GAGCTCATA---ATC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209460 20 +   1652518 C--------C-TCTGAA-GAGCTCATA---ATC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505879 20 +  60362399 C--------C-TCTGAG-GAACTTGTA---TTA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9515 20 -     23171 C--------C-TCTGAG-GAACTTGTA---TTA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222858 20 +   9314153 C--------C-TCTGAG-GAACTTGTA---TTA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41615993 20 +  59632846 C--------C-TCTGAG-GAACTTGTA---TTA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107574 20 -  63665305 C--------C-TCTGAG-GAACTTGTA---TTA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409579 19 -  46296322 C--------C-TTTGAA-GAG-TTGTA---ATC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591853 19 +  44709034 C--------C-TTTGAA-GAG-TTGTA---ATC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                     19 17 -      1607 C--------C-TATGAA-AGGTTTGT-----T-
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           270966 20 +    496798 C--------C-TCTGAA-GAGCTTGCA---TGC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                771 20 +      9923 C--------C-CCTGAA-GACTTTGTA---TTC
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28173 20 -     39886 C--------T-TATAAA-GAGCTTATA---TTA
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80053 20 -    217609 C--------C-TCTGAA-AAGCTTGTG---ATC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996903 20 +  23392119 C--------C-TATTAA-GAGTTTGTA---TTC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000344 20 +  23407841 C--------C-TATTAA-GAGTTTGTA---TTC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63425 20 -     66877 C--------C-TATTAA-GAGTTTGTA---TTC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5579 20 -     12580 C--------C-TCCGAA-GAGCACGGA---TGC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43636 20 +     53515 C--------C-TCCGAA-GAGCACGGA---TGC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373399 20 -  26074798 C--------C-TCTGAA-GAGCACGGA---TGC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8453 20 -     34880 C--------C-TCTGAA-GAGCACGGA---TGC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67549 20 -     89041 C--------C-TCTGAA-GAGCACGGA---TGC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2926 20 -      5494 C--------C-TCTGAA-GAGCTTGCA---TGC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492686 18 -  27778364 C--------C-TCTGAA-GAGCTTG-----TTC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19519 18 +     27315 C--------C-TCTGAA-GAGCTTG-----TTC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141763 20 -   4669795 C--------C-TCTGAA-GAGCGTGTA---TGC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45506 20 +     47900 C--------C-TCTGAA-GAGCGTGTA---TGC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            935 20 -     14410 C--------C-TCTGAA-GAGCGTGTA---TGC
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45319 20 -    148725 C--------C-TCTGAA-GAGCGTGTA---TGC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27521 20 -     40656 C--------C-TCTGAA-GAGCGTGTG---TGC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7485 20 +     20796 C--------C-TCTGAA-GAGCGTGTA---TGC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12603 20 -     17524 C--------C-TCTGAA-GAGCGTGTG---TGC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28328 18 -     34525 C--------C-TCTGAA-GAGCGTGTG-----C
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12106 20 -     25376 C--------C-TCTGAA-GAGCGTGTA---TGC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364700 20 -  39242232 C--------C-TCTGAA-GAGCGTGTA---TGC
i Cercopithecus_albogularis.ctg5                               C 0 I 7
s Cercopithecus_mona.ctg39                                  270420 20 +  21565898 C--------C-TCTGAA-GAGCGTGTA---TGC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32788 20 -     45857 C--------C-TCTGAA-GAGCGTGTG---TGC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27689 20 -     32606 C--------C-TCTGAA-GAGCGTGTA---TGC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3851 20 +      8499 C--------C-TCTGAA-GAGCTTGTA---TGC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26247 20 +     70610 C--------C-TCTGAA-GAGCGTGTA---TGC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23208 20 +     36323 C--------C-TCTGAA-GAGCGTGTG---TGC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13195 20 -     19938 T--------C-TCTGAA-GAGCTTATA---CTC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31120 28 -     33796 CTATGCTGTT-TCTGAA-GAGCTTGGA---TTC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5637 28 -     15404 CTATGCTGTC-TCTGAA-GAGCTTGGA---TTC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9454 20 -     32913 C--------C-TCTGAA-GAGCACGGA---CGC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19867 20 -     40346 C--------C-TCTGAA-GAGCACGGA---CGC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20122 20 +    216457 C--------C-TCTGAA-GAGCACGGA---CGC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19915 20 +     39636 C--------C-TCTGAA-GAGCACGGA---CGC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239256 20 -   2543920 T--------C-TATGAA-GAGTTTGTA---TTT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4511 20 +      5346 C--------C-TCCGAA-GAGCACGGA---TGC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           42985 20 -    112038 C--------C-TCTGAA-GAGCACGGA---TGC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8556 20 +     34062 C--------C-TCTGAA-GAGCACGGA---TGC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344109 20 +  18827391 C--------C-TCTGAA-GAGCGTGTG---TGC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10653 20 -     44032 C--------C-TCTGAA-GAGCGTGTG---TGC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305434 20 - 135778131 C--------C-TCTGAA-GAGCGTGTG---TGC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15325 20 +     15858 T--------C-TCTGAA-GAGCTTGTG---TTG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606900 20 -    839153 t--------c-tctgaa-gagcttgtg---ttg
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2019 20 +      2406 C--------C-TATGAA-GAGCTTGTA---TTC
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409839 20 -   2368649 C--------C-TCTGAA-GAGCGTGTA---TGC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379720 20 - 200372422 C--------C-TCTGAA-GAGCGTGTA---TGC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3277 20 -     84244 C--------C-TCTGAA-GAGCGTGTA---TGC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807725 19 +  53390261 C--------T-TC-TAA-GAGCTCATA---TTT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3279 20 -      8242 c--------c-tctgaa-gagtttgta---ttc
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44783 18 -     83289 C--------CCTATCAG-GAGA---TA---GTA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115363 18 - 224834208 C--------CCAATCAG-GAAA---TA---GCA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9881 20 +     12657 A--------T-TTTGAT-GAGTTTATA---TTT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4852 20 +     87169 C--------C-TCTGAA-GAACTTGTA---TTC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645902 20 -   1526836 C--------T-TGTGAC-GAGCTTGTA---CTC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18808 18 +     50838 C--------C-TATGAA-AAGTTTGT-----TT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4820 20 +     36344 C--------T-TGTTAA-GAGTTTTTA---TTC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28596 20 +     75252 C--------C-TATTAA-GAGTTTGTA---TTC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110551 20 -   2246927 T--------C-TCTGAA-GAGTTTATA---TTC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293056 28 +  12879189 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632407 20 -  35494412 C--------C-TCTGAA-GAGTTTGTA---ATC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330966 20 -   2620052 C--------C-CCGGAA-GACTTCGTA---TTC
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664970 18 -   1390856 C--------C-TCTGAA-GAGCTTG-----TTC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139763 18 -    198055 C--------C-TCTGAA-GAGCTTG-----TTC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99344 20 -    115145 C--------C-TATGAA-GAGTTTGTA---CTC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18950986 20 -  37912305 C--------C-TATGAT-GAACTTGTA---TTA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5912 20 -     10735 C--------C-TATGAT-GAACTTCTA---TTA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856041 20 - 111700974 C--------T-TCTGAA-GGGTTAGTA---TTC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6742 20 +     19438 c--------c-tctaaa-gagtttata---ttc
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240220 19 -    607251 C--------C-TTTGAA-GAG-TTGTA---ATC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226195 20 +  10337057 C--------C-TCTAAA-GAGCTTGGG---TTT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31505 18 +    110024 C--------CCTTTTAG-GAGG---TA---GTG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13476 18 +     18970 C--------CCTTTCAC-GAGG---TA---GTA
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916609 15 +  41312741 C--------T-TCTGAG-GAACTT--------G
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579389 20 +  14770903 t--------c-cttgaa-gagcttgta---ttc
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041884 18 -   4378816 C--------C-TCTGAA-GAGCCTG-----TTC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375822 18 +  39960074 C--------C-TCTGAA-GAGCCTG-----TTC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411729 18 -    498745 C--------C-TCTGAA-GAGCCTG-----TTC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666548  8 +   7059049 c--------c-tctgaa----------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 2
s Erythrocebus_patas.Contig38                               263645 20 +  21539334 C--------C-TCTGAA-GAGTGTGTA---TGC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71613 20 -    133382 C--------C-TCTGAA-GAGTTTGTA---ATC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_705718              189 20 +       377 C--------C-TCTGAA-GAGTTTGTA---ATC
i Eubalaena_japonica.EubJap_flattened_line_705718        N 0 C 0
s Eulemur_albifrons.k141_51491                               15265 28 -     24895 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               42975 28 -     70999 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86945 28 +    112731 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43508 28 +     68309 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53832 28 -     65740 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24464 28 -     75513 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48659 28 -     97555 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5383 28 +     30972 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43103 28 -     52037 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59506 28 -    111500 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247308 20 - 206538554 C--------C-TCTGAA-GAACTTGTA---TTC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117094 20 - 205367284 C--------C-TCTGAA-GAACTTGTA---TTC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28191 20 -     30238 C--------C-TCTGAA-GAACTTTTA---TTC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916901 20 -   3816255 C--------C-TATGAA-GAATTTGTA---TTC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126123 20 -    137831 C--------C-TCTGAA-GAGTTTGGA---TTC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9668 20 +     22493 C--------C-TCTGAA-GAGTTTGGA---TTC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21739 20 -     32986 C--------C-TCTGAA-GAGTTTGGA---TTC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1640 20 -     28519 C--------C-TCTGAA-GAGCTTGTA---TTC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91923 19 -     95226 C--------T-TTTGAA-GAG-TTGTA---CTC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34954 20 -     36801 T--------C-TTTGAA-GAACTTGTA---TTC
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6269 20 -      8343 C--------C-TCTGAA-GAGAGTGTA---TGC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255284 20 - 186649187 C--------C-TCTGAA-GAGAGTGTA---TGC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2453 20 -     78134 T--------C-TTTGAA-GAACTTGTG---TTC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15190 28 -     40692 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36592 28 +     49394 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61460 28 -     66874 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10334 28 -     42923 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17333 28 -     53142 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31284 20 -    327341 c--------c-tctgaa-gaacttgta---ttc
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9597 19 +     48891 C--------C-TTTGAA-GAG-TTGTA---ATC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932878 20 -  22651954 C--------C-TATGAA-GAGTTTGTA---TTC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                3993 20 +      4291 C--------C-TCTCCA-GAGCTTGTG---TTC
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8108 20 -     36432 C--------C-TCTCAA-GAGTTTGTA---ATC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552100 20 -   1711038 c--------c-tctgaa-gagtttgca---ttc
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1538 20 -      2730 C--------C-TCTGAA-GAGTTTGCA---TTC
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143293 20 -    630532 C--------C-TCTGAA-GAGCGTGTA---TGC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70449 20 +     83186 C--------C-TCTGAA-GCACTTGTA---TTC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72340 20 +    143317 C--------C-TATTAA-GAGTTTGTA---TTC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6327 20 +     12352 C--------C-TCTGAA-GAGCGTGTA---TGC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13511 20 +     55766 C--------C-TCTGAA-GAGCGTGTA---TGC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053111 20 + 191637585 C--------C-TCTGAA-GAGCGTGTA---TGC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7801989 20 +  11177569 C--------C-TCTGAA-GAGCGTGTA---TGC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7625 20 -    135385 C--------C-TGTGAA-GAGCTTGTA---TTC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387332 20 +   7955117 C--------T-TGTGTA-GAGCTGGTA---TTT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2890 28 +     11955 CTATGCTGTC-TCTGAA-GAGCTTGGA---TTC
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10508 20 -     16823 C--------C-TCTGAA-GAGTTTGTA---ATC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240345 16 +   9596543 G--------C-TATGAA-GAGATTAT-------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72348 20 -     97402 C--------C-TCTGAA-GAGTTTGTA---ATC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43731 20 +    110728 C--------C-TCTGAA-GAGCACGGA---TGC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    32636 20 -     49555 c--------c-cttgaa-gagcttgtg---ttc
i Lasiurus_borealis.LasBor_scaffold_26245                I 9 I 76
s Lemur_catta.scaffold_24                                 14759983 28 +  30322482 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4634 20 -     13097 C--------C-TCCGAA-GAGCACGGA---TGC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4388 20 +      5940 C--------C-TCCGAA-GAGCACGGA---TGC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4218 13 -      5717 C--------C-TCCGAA-GAG----------GC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10601 20 -     11567 C--------C-TCCAAA-GAGCACAGA---TGC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         11982 20 -     12945 C--------C-TCCGAA-GAGCACAGA---TGC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9497 28 +     29618 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9493 28 +     31569 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9503 28 +     24756 CTGTGCTGCC-TCTGAA-GAGCCTGGA---TTC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9503 28 +     16388 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        813986 20 -   3914936 C--------C-TCTGAG-GAACTTGTA---TTG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18355 17 +     24238 C--------C-TCTGAA-GAGC-TG-----TTC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341693 20 +    662738 C--------C-TCTGAA-GAGTTTGTA---ATC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334648 20 -   1826925 C--------C-TCTGAA-GAGCGTGTG---TGC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11820 20 +     19643 C--------C-TCTGAG-GAGTTTGGA---TTC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045490 20 -   6120653 C--------C-TCTGAG-GAGTTTGGA---TTC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39084678 20 +  43346337 c--------c-tttgaa-gagcttata---ttc
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615148 20 +  59628241 C--------C-TCTGAG-GAACTTGTA---TTA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46037 20 -     61512 C--------C-TCTGAA-GAGCGTGTA---TGC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373699 20 -  60120075 C--------C-TCTGAA-GAGCGTGTA---TGC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25967 20 +     30207 C--------C-TCTGAA-GAGCGTGTA---TGC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             805 20 -      5035 C--------C-TCTGAA-GAGCGTGTA---TGC
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25920 20 +     30527 C--------C-TCTGAA-GAGCGTGTA---TGC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37096 20 -     50087 C--------C-TCTGAA-GAGCGTGTA---TGC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46840 20 +     51645 C--------C-TCTGAA-GAGCGTGTG---TGC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416043 20 - 187317192 C--------C-TCTGAA-GAGCGTGTA---TGC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400273 20 +  25927173 C--------C-TCTGAA-GAGCGTGTA---TGC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49445 20 -     62418 C--------C-TCTGAA-GAGCGTGTA---TGC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1976 20 +     14901 C--------C-TCTAAA-GAGCGTGTA---TGC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45917 20 +     59329 C--------C-TCTGAA-GACCGTGTA---TGC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271825 20 +    668171 C--------C-TCTGAA-GAGCGTGTA---TGC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   463 20 -      5049 C--------C-TCTGAA-GAGCGTGTA---TGC
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3623 20 +     17132 C--------C-TCTGAA-GAGCGTGTG---TGC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223709 20 -    270270 c--------c-tctaaa-gagtttata---ttc
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323113 20 +  24302211 C--------C-TCTGAA-GAGCGTGTA---TGC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357944 20 -    752769 C--------C-TCTGAA-GAGCGTGTA---TGC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674039 20 -    737560 c--------c-cctgag-gagtttgtg---ttc
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221335 20 +    317179 t--------c-cctgag-gagcttgta---ttc
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501550 20 +  40650429 C--------T-TGTGCA-GAGCTGGTA---TTT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150884 18 +    207569 C--------C-TTTGAA-GAGT--GTA---TTC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26708 15 -     74585 C--------T-TCTGAG-GAACTT--------G
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50684 18 -    140813 C--------CTTATCAG-GATC---TA---TTA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429743 18 +  29670104 C--------CCAAATAG-GAGA---TA---GCA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87977 20 +     93471 C--------C-TCTGAA-GAGTTTGTA---ATC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10768 20 +     17804 C--------C-TCCGAA-GAGCACGGA---TGC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11268 20 -     12984 C--------C-TCCGAA-GAGCACGGA---TGC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19584 20 -     26561 C--------C-TCCGAA-GAGCACGGA---TGC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985333 28 +  93316391 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47276 20 +    145209 T--------T-TCTGCA-GGGTTTGTC---TTC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185568 20 +    200668 C--------C-CCTGAA-GACTTTGGA---TTC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962950 18 +  27267610 C--------CCTTTCAG-GAGG---TA---GTA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363724 20 -   8254450 c--------c-cttgaa-gagtttgta---atc
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42631 20 -     48117 c--------c-cttgaa-gagtttgta---atc
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23147 20 -     27822 C--------C-TCTGAA-GAGCGTGTA---TGC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         8997 20 +     27589 C--------C-TCTGAG-GAACTTGTA---TTG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53116 28 -     62432 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360082 20 +    437263 C--------C-TCTGAA-GAGTTTGTA---ATC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179800 20 +    366855 c--------c-cctgaa-gagtttgta---ttc
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26045 19 -     82753 C--------C-TTTGAA-GAG-TTGTA---ATC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19025  4 -     63510 C--------C-TC--------------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39702 11 +     47283 T--------C-CT----------TGTA---TTC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593662 18 + 120012414 C--------CCTATCAA-GAGA---TA---TTA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688051 18 + 129401213 C--------CCTATCAA-GAGA---TA---TTA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497345 18 + 130317789 C--------CCTATCAA-GAGA---TA---CTA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84009 20 -     86153 T--------C-TTTGAA-AAACTTGTA---TTC
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355630 15 +  14710649 C--------T-TCTGAG-GAACTT--------G
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63590 18 +     67721 C--------C-TTTGAA-ATGTTTGT-----TT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793948 20 +  10118263 t--------c-cttgaa-gagcttgta---ttc
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388121 20 +   6019432 t--------c-cttgaa-gagcttgta---ttc
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383909 20 +   4330536 t--------c-cttgaa-gagcttgta---ttc
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2718 20 +     18357 t--------c-cttgaa-gagcttgta---ttc
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120297 20 +    130748 T--------C-TCTGAA-GCACTTGTA---TTC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946816 17 +   3037898 ------------TTGAA-GAGTTTATA---TTA
i Nannospalax_galili.KL204047.1                          I 1 C 0
s Nasalis_larvatus.k141_1350636                              29796 20 +     34575 C--------C-TCTGAA-GAGCGTGTA---TGC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232758 20 -   7148211 C--------C-TCTGAA-GCGTTTGTA---ATC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128765 20 -    149072 c--------c-tctgaa-gagtttgta---ttc
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54219 20 -    132029 C--------C-TCTGAA-GAGCGTGTA---TGC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10314 20 -     16345 C--------C-TCTGAA-GAGCGTGTA---TGC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16199 20 +     22201 C--------C-TCTGAA-GAGCGTGTA---TGC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414420 20 -  22158432 C--------C-TCTGAA-GAGCGTGTA---TGC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26597 20 -     54323 C--------C-TCTGAA-GAGCGTGTA---TGC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198744 20 +   9404916 C--------C-TCTGAG-GAACTTGTA---TTA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638720 20 + 196305487 C--------C-TCTGAA-GAGTTTGGA---TTC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1323 20 -      9413 C--------C-TCTGAA-GAGTTTGGA---TTC
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566100 20 - 199412804 C--------C-TCTGAA-GAGTTTGGA---TTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557412 19 -   3988456 C--------A-TTTGAA-GAGC-TGCA---TTC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055546 18 -  11899542 C--------C-CATGAG-AAGTTAGT-----TT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452203 20 +   2017862 C--------C-TCTGAG-GAACTTGTA---TTG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436813 19 -    630418 C--------C-TTTGAA-GAG-TTGTA---ATC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15007 19 +    150152 C--------C-TTTGAA-GAG-TTGTA---ATC
i Okapia_johnstoni.LVCL01S0005463.1                      I 203 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93302 18 -    140218 C--------CCTTTCAA-GAGG---TA---GTA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4184  5 -     41509 -------------------------TT---GTA
i Onychomys_torridus.OnyTor_scaffold_28377               I 2 C 0
s Orcinus_orca.KB316932.1                                  8103150 20 +  10937097 C--------C-TCTAAA-GAGTTTGTA---ATC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                197 20 +     11607 C--------A-TGTGAA-AAGCTTGTA---TTC
i Orycteropus_afer.OryAfe_flattened_line_201229          N 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104149 17 - 174332312 C--------C-TCTGAA-GAGC-TG-----TTC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39789 20 +    559221 C--------C-TCTGAG-GAACTTGTA---TTA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41269 20 -     51505 C--------A-TCTGAA-GAGTTTGGA---TTC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354273 20 +   1103335 C--------A-TCTGAA-GAGTTTGGA---TTC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404717 19 -  44047080 C--------C-TTTGAA-GAG-TTGTA---ATC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5236 19 +     17875 C--------C-TTTGAA-GAG-TTGTA---ATC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.KZ622849.1                                 33996 20 -    110857 C--------C-TCTGAA-GAGCGTGTA---TGC
i Pan_troglodytes.KZ622849.1                             I 155 I 135
s Panthera_onca.PanOnc_flattened_line_3271                   25014 20 -    230217 T--------G-TCTGAA-GAACTTGTA---TTC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462340 20 -  18783137 T--------G-TCTGAA-GAACTTGTA---TTC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3972999 20 +   8748460 C--------C-TCTGAA-GAACTTGTA---TTC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616245 19 +   2937107 C--------C-TTTGAA-GAG-TTGTA---ATC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243945 20 - 183742232 C--------C-TCTGAA-GAGCGTGTA---TGC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10407 20 +     21308 C--------C-TCTGAA-GAGCGTGTA---TGC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  292980 20 -  20919399 C--------C-TCTGAA-GAGCGTGTA---TGC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23055 20 -     27687 C--------C-TCTGAA-GAGCGTGTA---TGC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16201 20 +     16796 C--------C-TCTGAA-GAGCGTGTA---TGC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23012 20 -     23640 C--------C-TCTGAA-GAGCGTGTA---TGC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15612 20 +     78924 G--------C-TCTGAA-GAAGTTGAA---TTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27599 20 +     31479 C--------C-TCTGAA-GAATTTGGA---TTC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            19968 20 -     24908 C--------C-TCTGAA-GAGTTTGGA---TTC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2339 20 +      9367 C--------C-TATGAT-GAGCTTGTA---TTA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247381 18 +  18517816 C--------CCCATCAG-CAGA---TA---GTA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32467 19 -     56120 C--------T-AATGA--GCATCTGTA---TTC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4676 20 -     63832 C--------C-TCTGAA-GCGTTTGTA---ATC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3227 20 +     55023 C--------T-TCTGAA-GAGCGTGTA---TGC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2765 20 -     89929 C--------T-TCTGAA-GAGCGTGTA---TGC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3355 20 +     40849 C--------T-TCTGAA-GAGCGTGTA---TGC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255029 20 +  14605196 C--------T-TCTGAA-GAGCGTGTA---TGC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4538 20 +     22231 T--------C-CTTGAA-GAGCTTTTA---TTC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65352 20 +    207309 C--------C-TCTGAA-GAGCACAGA---TGC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6444 20 -     25401 C--------C-TCTGAA-GAGCACAGA---TGC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32188 20 +     58159 C--------C-TCTGAA-GAGCACAGA---TGC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32464 20 +     63561 C--------C-TCTGAA-GAGCACAGA---TGC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32224 20 +     51148 C--------C-TCTGAA-GAGCACAGA---TGC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557194 20 -   4542175 C--------C-TCTGAA-GAGCACAGA---TGC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32208 20 +     51125 C--------C-TCTGAA-GAGCACAGA---TGC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1693 20 +     19503 C--------C-TCTGAA-GAGTTTGTA---ATC
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8619 20 +     39866 C--------C-TATGAA-GAGCACGTA---TGC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3701 20 -      9282 C--------C-TATAAA-GAGCACGTA---TGC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43105 20 -     87950 C--------C-TATGAA-GAGCACGTA---TGC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43501 20 -     88961 C--------C-TATGAA-GAGCACGTA---TGC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8197 20 -     39403 C--------C-TATGAA-GAGCACGTA---TGC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43148 20 +     87928 C--------C-TATGAA-GAGCACGTA---TGC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8196 20 -     60166 C--------C-TATGAA-GAGCACGTA---TGC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15133 20 -     67232 C--------C-TATGAA-GAGCACGTA---TGC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43049 20 -     90634 C--------C-TATGAA-GAGCACGTA---TGC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44516 20 +     89403 C--------C-TATGAA-GAGCACGTA---TGC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178422 20 - 189387572 C--------C-TCTGAA-GAAAGTGCA---TGC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193239 20 -   9816681 C--------C-TCTGAA-GAAAGTGCA---TGC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28376 20 +     69807 C--------C-TCTGAA-GAGCGTGTA---TGC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45557 20 -     80239 C--------C-TCTGAA-GAGCGTGTA---TGC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 3895 20 +      7663 C--------C-TCTCCA-GAGTTTGTG---TTC
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983131 28 +   4620579 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566641 28 -   2598838 CTATGCTGTC-TCTGAA-GAGCTTGGA---TTC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4279 28 -      7103 CTATGCTGTC-TCTGAA-GAGCTTGGA---TTC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4876 28 -     11706 CTATGCTGTC-TCTGAA-GAGCTTGGA---TTC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8614 28 -     30655 CTATGCTGTC-TCTGAA-GAGCTTGGA---TTC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34927 28 +     46564 CTATGCTGTC-TCTGAA-GAGGTTGGA---TTC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95206 28 -     98465 CTATGCTGTC-CCTGAA-GAGCTTGGA---TTC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8845 28 +     35169 CTATGCTGTC-TCTGAA-GAGCTTGGA---TTC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            37983 18 +     52041 C--------CCTATCAG-GATC---TA---TTA
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52693 20 -     66298 c--------c-cctgaa-gagtttgta---ttc
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5204 15 -     18639 C--------T-TCTGAG-GAACTT--------G
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841282 20 -  28871421 C--------C-TCTAAA-GAGTTTATG---TTC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537797 20 -   4952924 C--------C-TCTAAA-GAGTTTATG---TTC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099657 20 +  38429054 C--------C-TTGGAA-GAGCTTGTA---TTC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27752 20 +     91421 C--------C-TCTGAA-GAGCGTGTG---TGC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154236 20 -   7812017 C--------C-TCTGAA-GAGCGTGTG---TGC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8609 20 +     72585 C--------C-TCTGAA-GAGCGTGTG---TGC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53730 19 +     55069 C--------C-TTTGAA-GAG-TTGTA---ATC
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023267 18 -  90668790 G--------CCTATCAG-GAGA---TA---TTA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915262 20 +   3329780 c--------c-tctgaa-gagtttata---ttc
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2330 20 +      7119 C--------C-TCTGAA-GAGCGTGTA---TGC
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122946 20 + 195417433 C--------C-TCTGAA-GAGCGTGTA---TGC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237172 20 -   7961872 C--------C-TCTGAA-GAGCGTGTA---TGC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75327 20 -    116970 C--------C-TCTAAA-GAGTTTATA---AAC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 34
s Saguinus_bicolor.k141_1429097                               4509 20 +     27962 C--------C-TCCGAA-GAGCACGGA---TGC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4403 20 +      6077 C--------C-TCCAAA-GAGCACGGA---TGC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4493 20 +      5971 C--------C-TCTGAA-GAGCACGGA---TGC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4414 20 +      5932 C--------C-TCCGAA-GAGCGCGGA---TGC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2756 20 -      4390 C--------C-TCCGAA-GAGCACGGA---TGC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392193 20 - 209938924 C--------C-TCCGAA-GAGCACGGA---TGC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4362 20 +      5979 C--------C-TCCGAA-GAGCACGGA---TGC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                932 20 -     22275 C--------C-TCCAAA-GAGCACGGA---TGC
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8405 19 +     16473 C--------C-TTTGAA-GAG-TTGTA---ATC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109528 20 + 121099817 C--------C-TCTGAA-GAGCATGGA---TGC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31095 20 -     47369 C--------C-TCTGAA-GAGCATGGA---TGC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31481 20 -     79414 C--------C-TCTGAA-GAGCATGGA---TGC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28172 20 -     34454 C--------C-TCTGAA-GAGCATGGA---TGC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15573 20 -     22428 C--------C-TCTGAA-GAGCATGGA---TGC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30727 20 -     47109 C--------C-TCTGAA-GAGCATGGA---TGC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238773 20 +   5703754 C--------C-TCTGAA-GAGCACGGA---TGC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8363 20 +     21866 C--------C-TCTGAA-GAGCACGGA---TGC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116429 19 +    313613 C--------T-TC-TAA-GAGCTCATA---TTC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26071 20 +     27374 C--------C-TCTGAA-GAGCGTGTA---TGC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29583 20 +     58920 C--------C-TCTGAA-GAGCGTGTA---TGC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16081 20 -     45317 C--------C-TCTGAA-GAGCGTGTA---TGC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23739 20 -     42441 C--------C-TCTGAA-GAGCGTGTA---TGC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26417 20 -     29113 C--------C-TCTGAA-GAGCGTGTA---TGC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29492 20 -     48123 C--------C-TCTGAA-GAGCGTGTA---TGC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49762 18 +     77746 A--------CCGACCAG-GAGA---TA---GTA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864698 20 -   1910179 C--------C-TGTGAA-GAACTTGTG---TTC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671815 20 +  18376816 C--------T-TTTGAT-GAGCTTATA---TTT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868910 20 +   3870691 C--------T-TGTGCA-GAGCTGGTA---TTT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7289 20 -     97271 C--------C-TCTGAG-GAACTTGTA---TTG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125425 20 +    196729 C--------C-TCTGAA-GAACTTGTA---TTC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644310 20 +  69701581 C--------C-TCTGAA-GAGTTTGTA---ATC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391679 20 +   1523678 C--------C-TCTGAA-GAGCGTGTA---TGC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14859 20 +     22964 c--------c-cttgaa-gagtttgta---tta
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3288 20 +      5583 T--------C-TCTGAA-GAGCTTGTA---TTT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192162 18 +    199430 G--------C-TCTGAA-GAGCTTG-----TTC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106132 18 -    539355 C--------C-TCTGAA-GAGCTTG-----TTC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1199 20 +      9917 C--------C-TCTGAA-GAGCTTGCA---TGC
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                7997 20 +     20590 C--------C-TCTGAA-GAGCTTGCA---TGC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353931 20 - 186847797 C--------C-TCTGAG-GAGCGTGTA---TGC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24626 16 -     33621 C--------C-TATGA--G---TTGTA---TTC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20289 11 -     31044 T--------C-TCTGAA-GAG------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480686 20 -    610378 C--------C-TCTGAA-GACGTTGTA---TTC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21616 20 +     26378 C--------C-TCTGAA-GAGCGTGTA---TGC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34292 20 -     78344 C--------C-TCTGAA-GAGCGTGTA---TGC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20941 20 +     25722 C--------C-TCTGAA-GAGCGTGTA---TGC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29248 20 -     62838 C--------C-TCTGAA-GAGCGTGTA---TGC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29292 20 +     46913 C--------C-TCTGAA-GAGCGTGTA---TGC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10101 20 -     28527 C--------C-TCTGAA-GAGCGTGTA---TGC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31183 20 -     64340 C--------C-TCTGAA-GAGCGTGTA---TGC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29221 20 -     63452 C--------C-TCTGAA-GAGCGTGTA---TGC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10668 20 +     22490 C--------C-TCTGAA-GAGCGTGTA---TGC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4091 20 -      6147 C--------C-TCTGAA-GAGCGTGTA---TGC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11004 20 -     13050 C--------C-TCTGAA-GAGCGTGTA---TGC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256234 20 -   6242583 C--------C-TCTGAA-GAGCGTGTA---TGC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2262 20 +     19340 C--------C-TCTGAA-GAGCGTGTA---TGC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174018 19 -    200418 C--------C-TCCGAA-GAG-TTGTG---TTC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6481444 20 -  10818551 C--------C-TCTGAA-GAGCTTCGA---TTC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834933 20 -   4065304 T--------T-TCTGAA-GAGTCTGTA---TTC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8950 23 -     70247 T--------T-TCTGAA-GAGTCTGTATTATTC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366263 20 -  33153633 C--------C-TCTGAA-GAGTTTGTA---ATC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4156 19 -     21056 C--------T-TC-TAA-GAGCTCATA---TTA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Varecia_rubra.k141_787544                                  25783 28 -     30710 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24690 28 -    147434 CTGTGCTGCC-TCTGAA-GAGCTTGGA---TTC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76845 20 +   5488506 C--------C-TCTGAA-GAGCTCGTA---ATC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105510 20 -    112863 C--------C-TCTGAG-GAACTTGTA---TTA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174702 20 -    224448 C--------T-TCTGAA-GAGCTGGTA---TTT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29411 20 -     86975 c--------c-tctgag-gagcttgta---ttg
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       533 16 -      1899 C--------C-TATGAA-GGGATTAC-------
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1547 20 +      2126 C--------C-TCTGAA-GAGTTTGTA---ATC
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Ursus_maritimus.KK499267.1                                182361 286 +   5085361 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       5989 13 +     36723 TG-GGATT-------TGGGAT
s Acinonyx_jubatus.LLWD01001279.1                           813419 13 +   1699592 CG-GGATT-------TAGAAA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25665 13 +     63021 TG-GGGTT-------TAATAG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415876 12 +  29979442 tg--gatt-------taggaa
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216218 13 +    347723 tg-ggatt-------taggaa
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18582  2 -     61208 -------------------TG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 4
s Allenopithecus_nigroviridis.k141_3755588                   48627 20 +     53615 TG-GGAGTTGGGAGTTGGGGT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           658 20 +     13857 TG-GGAGTTGGGAGTTGGGGT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17209 20 -     21945 TG-GGAGTTGGGAGTTGGGGT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18894 20 +     32033 TG-GGAGTTGGGAGTTGGGGT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72735 13 -     84148 TG-GGAAC-------CGGAAT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44974 13 -     78289 TG-GGAAC-------TGGAGT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44413 13 +     55831 TG-GGAAC-------TGGAGT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42863 13 -     64179 TG-GGAAC-------TGGAGT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24497 13 -     24835 TG-GGAAC-------TGGAGT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41488 13 +     45454 TG-GGAAC-------TGGAGT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47137 13 +     70886 TG-GGAAC-------TGGAAT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9310 13 +     30854 TG-GGAAC-------TGGAGT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33444 13 +     42133 TG-GGAAC-------TGGAGT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585869 13 +   2318259 TG-GGATC-------TAGGAA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177669 13 -    412891 tg-ggatt-------taggaa
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50976 13 -     68529 TG-GGATC-------TAGGAA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1701 13 +     17741 TG-GGATT-------TGGAAT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2326 13 -     15923 TG-GGATT-------TGGAAT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672608 13 +   5030052 TG-GGATT-------TGGAAT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2602 13 -     16391 TG-GGATT-------TGGAAT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2161 13 -     17186 TG-GGATT-------TGGAAT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16680 13 -     32367 CA-GGAGT-------TAGGAT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20779 13 -     45910 TG-GGTTC-------TATGAT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5935 13 -     15198 TG-GGATT-------TAGGGA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275198 13 +  21539123 TG-GGAAC-------TGGAAT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11366 13 +     48076 TG-GGAAC-------TGGAAT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6501 13 -     28759 TG-GGAAC-------TGGAAT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34055 13 +     44353 TG-GGAAC-------TGGAAT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49426 13 -     71267 TG-GGAAC-------TGGAAT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23484 13 -     33135 TG-GGAAC-------TGGAAT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6774 13 +     11645 TG-GGATC-------TGTGAT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6782 13 -     19611 TG-GGATC-------TGTGAT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964019 13 -  23207421 TG-GGATC-------TAGGAA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          519 13 -     25979 TG-GGATC-------TAGGAA
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86877 13 +    124022 TG-GGATC-------TAGGAA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22419 13 +    288883 CG-GGATC-------TAGGAA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356809 13 +  48749331 CG-GGATC-------TAGGAA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755373 13 +   1948126 CG-GGATC-------TAGGAA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545515 13 -  45695690 CG-GGATC-------TAGGAA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530530 13 -   4408762 CG-GAATC-------TAGGAA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8374 13 +     28062 TG-GGATT-------TGGAAT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43668 13 -     91139 TG-GGATT-------TGGAAT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21194 13 +     95584 TG-GGATT-------TGGAAT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21107 13 +    119600 TG-GGATT-------TGGAAT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10681 13 +     18648 TG-GGATT-------TGGAAT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10216 13 -     13885 TG-GGATT-------TGGAAT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2286 13 -      8861 TG-GGATT-------TGGAAT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454678 13 + 189096842 TG-GGATT-------TGGAAT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2201 13 +      8664 TG-GGATT-------TGGAAT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631534 13 +  17673402 TG-GGATC-------TAAGAA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665820 13 +   7040546 TG-GGATC-------TAAGAA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209480 13 +   1652518 TG-GGATC-------TAAGAA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505899 14 +  60362399 TGAAGATT-------TAGAAA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9535 14 -     23171 TGAAGATT-------TAGAAA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222878 14 +   9314153 TGAAGATT-------TAGAAA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616013 14 +  59632846 TGAAGATT-------TAGAAA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107594 14 -  63665305 TGAAGATT-------TAGAAA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409598 13 -  46296322 TG-GGATC-------TAGGAA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591872 13 +  44709034 TG-GGATC-------TAGGAA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                     36 13 -      1607 TG-GGATC-------TTGGCT
i Capromys_pilorides.CapPil_scaffold_762519              C 0 I 3
s Carlito_syrichta.NW_007259797.1                           270986 13 +    496798 TG-GGATC-------AAAGAT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                791 13 +      9923 TG-GGATT-------TAGGAA
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28193 13 -     39886 TG-GGACC-------TAGGAT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80073 13 -    217609 TG-AGATC-------TAGGAA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996923 13 +  23392119 TN-NNNNN-------NNNNNN
i Cavia_aperea.AVPZ01000300.1                            C 0 I 3
s Cavia_porcellus.DS562891.1                               5000364 13 +  23407841 TG-GAATC-------TCAGAT
i Cavia_porcellus.DS562891.1                             C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_23560                       63445 13 -     66877 TG-GAATC-------TCAGAT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 3
s Cebuella_niveiventris.k141_592277                           5599 13 -     12580 TG-GGATT-------TGGAAT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43656 13 +     53515 TG-GGATT-------TGGAAT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373419 13 -  26074798 TG-GGGTT-------TGGAAT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8473 13 -     34880 TG-GGGTT-------TGGAAT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67569 13 -     89041 TG-GGGTT-------TGGAAT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2946 13 -      5494 TG-GGATC-------AAAGAT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492704 13 -  27778364 TG-GGATC-------TAGGAA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19537 13 +     27315 TG-GGATC-------TAGGAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141783 13 -   4669795 TG-GGAGT-------TGGGAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45526 13 +     47900 TG-GGAGT-------TGGGAT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            955 13 -     14410 TG-GGAGT-------TGGGAT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45339 13 -    148725 TG-GGAGT-------TGGGAT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27541 20 -     40656 TG-GGAGTTGGGAGTTGGGGT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7505 20 +     20796 TG-GGAGTTGGGAGTTGGGGT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12623 20 -     17524 TG-GGAGTTGGGAGTTGGGGT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28346 20 -     34525 TG-GGAGTTGGGAGTTGGGGT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12126 20 -     25376 TG-GGAGTTGGGAGTTGGGGT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364727  6 -  39242232 ---------------TGGGGT
i Cercopithecus_albogularis.ctg5                               I 7 C 0
s Cercopithecus_mona.ctg39                                  270440 20 +  21565898 TG-GGAGTTGGGAGTTGGGGT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32808 20 -     45857 TG-GGAGTTGGGAGTTGGGGT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27709 20 -     32606 TG-GGAGTTGGGAGTTGGGGT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3871 20 +      8499 TG-GGAGTTGGGAGTTGGGGT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26267 20 +     70610 TG-GGAGTTGGGAGTTGGGGT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23228 20 +     36323 TG-GGAGTTGGGAGTTGGGGT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13215 13 -     19938 TG-GGATC-------TAGAAT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31148 13 -     33796 TG-GGATC-------TGTGAG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5665 13 -     15404 TG-GGATC-------TGAGAA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9474 13 -     32913 TG-GGATT-------TGGAAT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19887 13 -     40346 TG-GGATT-------TGGAAT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20142 13 +    216457 TG-GGATT-------TGGAAT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19935 13 +     39636 TG-GGATT-------TGGAAT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239276 13 -   2543920 TG-AGATC-------TAGGAT
i Chinchilla_lanigera.JH722012.1                         C 0 I 3
s Chiropotes_albinasus.k141_1946120                           4531 12 +      5346 TG-AG-TT-------TGGAAT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43005 13 -    112038 TG-GGATT-------TGGAAT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8576  8 +     34062 TG-GGATT-------T-----
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344129 20 +  18827391 TG-GGAGTTGGGAGTTGGGGT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10673 20 -     44032 TG-GGAGTTGGGAGTTGGGGT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305454 20 - 135778131 TG-GGAGTTGGGAGTTGGGGT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15345 13 +     15858 TG-GGATC-------TAGAAT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606920 13 -    839153 tg-ggatc-------tagaat
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2039 13 +      2406 TG-GGGTC-------TAGGAT
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409859 20 -   2368649 TG-GGAGTTGGGAGTTGGGAT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379740 20 - 200372422 TG-GGAGTTGGGAGTTGGGAT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3297 20 -     84244 TG-GGAGTTGGGAGCTGGGAT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807744 13 +  53390261 TG-GGATA-------TAGGAT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3299 13 -      8242 tg-gGATC-------TAAAAA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44801 13 -     83289 TG-GGATC-------TCATAT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115381 13 - 224834208 TG-GGTTc-------taacaa
i Cricetulus_griseus.LT883664.1                          C 0 I 4
s Crocidura_indochinensis.CroInd_scaffold_77846               9901 13 +     12657 TC-ATATA-------TAGGAA
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4872 13 +     87169 TG-AGATT-------TAGGAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645922 13 -   1526836 TG-GAATC-------TAGGAT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18826 13 +     50838 TG-GGATC-------TAGGCT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 3
s Cuniculus_paca.CunPac_flattened_line_7025                   4840 13 +     36344 TG-GGATC-------TAGGAT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 3
s Dasyprocta_punctata.DasPun_flattened_line_15900            28616 13 +     75252 TG-GGATG-------TAGGAT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 3
s Dasypus_novemcinctus.JH564415.1                          2110571 13 -   2246927 TG-GGATC-------TAGAAT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293084 13 +  12879189 TG-GTATC-------TATGAT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632427 13 -  35494412 TG-GGATC-------TAGGAA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330986 13 -   2620052 TG-GGGTT-------TAGGAA
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  664988 13 -   1390856 TG-GGATC-------TAGGAA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139781 13 -    198055 TG-GGATC-------TAGGAA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99364 13 -    115145 TG-AGATC-------TAGGAT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 3
s Dipodomys_ordii.KN672350.1                              18951006 13 -  37912305 TG-GGATA-------TAATAT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5932 13 -     10735 TG-GGATA-------TAATAT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856061 13 - 111700974 TT-AAATT-------TATGAT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6762 13 +     19438 tg-ggatc-------taggaa
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240239 13 -    607251 TG-GGATC-------TAGGAA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226215 13 +  10337057 GG-GGTCC-------TAGGAT
i Elephantulus_edwardii.JH947257.1                       C 0 I 46
s Ellobius_lutescens.LOEQ01008920.1                          31523 13 +    110024 TG-GGATC-------TAATAT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13494 13 +     18970 TG-GGATC-------TAATAT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916624 13 +  41312741 TG-GGATT-------TAGGAA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579409 13 +  14770903 tg-ggatc-------taggaa
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041902 13 -   4378816 TA-GGATC-------TAgaaa
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375840 13 +  39960074 TG-GGATC-------TAGGAA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411747 13 -    498745 TG-GGATC-------TAGGAA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666558 13 +   7059049 ta-gaata-------taggac
i Erinaceus_europaeus.JH835339.1                         I 2 C 0
s Erythrocebus_patas.Contig38                               263665 20 +  21539334 TG-GGAGTTGGGAGTTGGGGT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71633 13 -    133382 TG-GGATC-------TAGGAA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_705718              209 13 +       377 TG-GGATC-------TAGGAA
i Eubalaena_japonica.EubJap_flattened_line_705718        C 0 C 0
s Eulemur_albifrons.k141_51491                               15293 13 -     24895 TG-GGGTC-------TGTGAT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43003 13 -     70999 TG-GGGTC-------TGTGAT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86973 13 +    112731 TG-GGGAC-------TGTGAT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43536 13 +     68309 TG-GGGTC-------TGTGAT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53860 13 -     65740 TG-GGGTC-------TGTGAT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24492 13 -     75513 TG-GGGTC-------TGTGAT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48687 13 -     97555 TG-GGGTC-------TGTGAT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5411 13 +     30972 TG-GGGTT-------TGTGAT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43131 13 -     52037 TG-GGGTC-------TGTGAT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59534 13 -    111500 TG-GGGTC-------TGTGAT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247328 13 - 206538554 TG-GGATT-------TAGAAA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117114 13 - 205367284 TG-GGATT-------TAGAAA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28211 13 -     30238 TG-GGATT-------TAGAAA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916921 13 -   3816255 TA-CACTC-------TAGGAT
i Fukomys_damarensis.KN121974.1                          C 0 I 3
s Galago_moholi.ctg3793                                     126143 13 -    137831 TG-GGTTC-------TATAGT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9688 13 +     22493 TG-GGTTC-------TATAGT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21759 12 -     32986 TG-AGTTC-------T-TAGT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1660 13 -     28519 TG-GGATC-------TAGGAT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91942 13 -     95226 TG-GGATC-------TAGGAA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34974 13 -     36801 TG-GAAAT-------GTGGAG
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6289 13 -      8343 TG-GGATT-------TGGGAT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255304 13 - 186649187 TG-GGATT-------TGGGAT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2473 13 -     78134 TG-GAAAC-------TTGGAG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15218 13 -     40692 TG-GGATC-------TGTGAT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36620 13 +     49394 TG-GGATC-------TGTGAT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61488 13 -     66874 TG-GGATC-------TGTGAT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10362 13 -     42923 TG-GGATC-------TGTGAT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17361 13 -     53142 TG-GGATC-------TGTGAT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31304 13 -    327341 tg-ggatt-------taggaa
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9616 13 +     48891 TG-GGATC-------TAGGAA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932898 13 -  22651954 TG-GGCTC-------TAGGAT
i Heterocephalus_glaber.JH602082.1                       C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_154059                4013 13 +      4291 TG-GGGTT-------CACGAT
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8128 13 -     36432 TG-GGTTC-------TAGGAA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552120 13 -   1711038 tg-ggatc-------taggaa
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1558 13 -      2730 TG-GGATC-------TAGGAA
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143313 13 -    630532 TG-GGATT-------TGGGAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70469 13 +     83186 TG-GGATT-------TAGGAA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72360 13 +    143317 TG-GGATC-------TAGGAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 3
s Hylobates_agilis.k141_1155965                               6347 13 +     12352 TG-GGATT-------TGGGAT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13531 13 +     55766 TG-GGATT-------TGGGAT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053131 13 + 191637585 TG-GGATT-------TGGGAT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802009 13 +  11177569 TG-GGATT-------TGGGAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7645 13 -    135385 TG-GGATC-------TAGAAT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 3
s Ictidomys_tridecemlineatus.JH393364.1                     387352 13 +   7955117 TG-GGATC-------TAGGTT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2918 13 +     11955 TG-GGATC-------TGTGAT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10528 13 -     16823 TG-GGATC-------TAGGAA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240361  2 +   9596543 -------------------CG
i Jaculus_jaculus.JH725527.1                             C 0 I 4
s Kogia_breviceps.KogBre_flattened_line_3970                 72368 13 -     97402 TG-GGATC-------TAGGAA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43751 13 +    110728 TG-GGAAC-------TGGAAT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63381 13 -     65777 tg-ggatc-------taggaa
i Lasiurus_borealis.LasBor_scaffold_16567                I 20 C 0
s Lemur_catta.scaffold_24                                 14760011 13 +  30322482 TG-GGATC-------TGTGAT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4654 13 -     13097 TG-AGATT-------TGGAAT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4408 13 +      5940 TG-AGATT-------TGGAAT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4231 13 -      5717 TG-AGATT-------TGGAAT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10621 13 -     11567 TG-GGATT-------TGGAAT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12002 13 -     12945 TG-GGATT-------TGGAAT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9525 12 +     29618 TG-G-ATC-------TGTGAT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9521 12 +     31569 TG-G-ATC-------TTTGAT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9531 12 +     24756 TG-G-ATC-------TGTGAT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9531 12 +     16388 TG-G-ATC-------TGTGAT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814006 13 -   3914936 TG-GGATT-------TAGGAA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18372 13 +     24238 CA-GGATC-------TGGGAT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341713 13 +    662738 TG-GGATC-------TAGGGA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334668 13 -   1826925 TG-GGAGT-------TGGGAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11840 13 +     19643 TG-GGTTC-------TATGAT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045510 13 -   6120653 TG-GGTTC-------TATGAT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39084698 13 +  43346337 tg-ggatc-------taggat
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615168 14 +  59628241 TGAAGATT-------TAGGAA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46057 13 -     61512 TG-GGAGT-------TGGGAT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373719 13 -  60120075 TG-GGAGT-------TGGGAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                25987 13 +     30207 TG-GGAGT-------TGGGAT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             825 13 -      5035 TG-GGAGT-------TGGGAT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25940 13 +     30527 TG-GGAGT-------TGGGAT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37116 13 -     50087 TG-GGAGT-------TGGGAT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46860 13 +     51645 TG-GGAGT-------TGGGAT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416063 13 - 187317192 TG-GGAGT-------TGGGAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400293 13 +  25927173 TG-GGAGT-------TGGGAT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49465 13 -     62418 TG-GGAGT-------TGGGAT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 1996 13 +     14901 TG-GGAGT-------TGGGAT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45937 13 +     59329 TG-GGAGT-------TGGGAT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271845 13 +    668171 TG-GGAGT-------TGGGAT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   483 13 -      5049 TG-GGAGT-------TGGGAT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3643 13 +     17132 TG-GGAGT-------TGGGAT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223729 13 -    270270 tg-ggatc-------taggaa
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323133 13 +  24302211 TG-GGAGT-------TGGGAT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357964 13 -    752769 TG-GGAGT-------TGGGAT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674059 13 -    737560 tg-ggatc-------taggac
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221355 13 +    317179 tg-ggatc-------taggac
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501570 13 +  40650429 TG-GGATC-------TAGgtt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150902 13 +    207569 TG-GGATC-------AAGGAA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26723 13 -     74585 TG-GGATT-------TAGGAA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50702 13 -    140813 TG-GGATC-------GAATAT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429761 13 +  29670104 TG-GGTTC-------TAATAT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     87997 13 +     93471 TG-GGATC-------TAGGAA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10788 13 +     17804 TG-GGATT-------TGGAAT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11288 13 -     12984 TG-GGATT-------TGGAAT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19604 13 -     26561 TG-GGATT-------TGGAAT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985361 13 +  93316391 TG-GGATC-------TGTGAT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47296 13 +    145209 TC-AAAAC-------TAGGAT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185588 13 +    200668 TG-GGGTT-------TAGGAA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962968 13 +  27267610 GG-GGATC-------TAATAT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363744 13 -   8254450 tg-ggatc-------taggaa
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42651 13 -     48117 tg-ggatc-------taggaa
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23167 13 -     27822 TG-GGAG-T------TGGGGT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9017 13 +     27589 TG-GGATT-------TAGGAA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53144 13 -     62432 TG-GGATC-------TGTGAG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360102 13 +    437263 TG-GGATC-------TAGGAA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179820 13 +    366855 tg-atatt-------taggaa
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26064 13 -     82753 TG-GGATC-------TAAGAA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19029 13 -     63510 TG-GGATT-------TAGGAA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39713 13 +     47283 TG-GGATC-------TAGGAA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593680 13 + 120012414 TG-GGATC-------TAATAT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688069 13 + 129401213 TG-GGATC-------TAATAT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497363 13 + 130317789 TG-GGATC-------TAATAT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84029 13 -     86153 TG-GAAAC-------CTGGAG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355645 13 +  14710649 TG-GGATT-------TAGGAA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63608 13 +     67721 TG-GAATC-------TAGGTT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 3
s Myotis_brandtii.KE162005.1                               9793968 13 +  10118263 tg-ggatc-------taggaa
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388141 13 +   6019432 tg-ggatc-------taggaa
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383929 13 +   4330536 tg-ggatc-------taggaa
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2738 13 +     18357 tg-ggatc-------taggaa
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120317 13 +    130748 TG-GGATC-------TAGAAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946833 13 +   3037898 TG-GGATA-------tcatat
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29816 20 +     34575 TG-GGAGCTGGGAGTTGGGAT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232778 13 -   7148211 TG-GGATC-------TAGGAA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128785 13 -    149072 tg-ggatt-------taggaa
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54239 13 -    132029 TG-GGATT-------TGGGAT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10334 13 -     16345 TG-GGATT-------TGGGAT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16219 13 +     22201 TG-GGATT-------TGGGAT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414440 13 -  22158432 TG-GGATT-------TGGGAT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26617 13 -     54323 TG-GGATT-------TGGGAT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198764 14 +   9404916 TGAAGATT-------TAGAAA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638740 13 + 196305487 TG-GGTTC-------TATGAT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1343 13 -      9413 TG-GGTTC-------TATGAT
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566120 13 - 199412804 TG-GGTTC-------CATGAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557431 13 -   3988456 TA-ATATC-------TGGGAT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055564 13 -  11899542 TG-GGATC-------TAGGct
i Octodon_degus.JH651603.1                               C 0 I 3
s Odobenus_rosmarus.KB229312.1                             1452223 13 +   2017862 TG-GGATT-------TAGGAA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436832 13 -    630418 TG-GGATC-------TAAGAA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15026 13 +    150152 TG-GGATC-------TAGGAA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93320 13 -    140218 TG-GGATC-------TAATAT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4189 13 -     41509 AG-GGACC-------GAATAT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103170 13 +  10937097 TG-GGATT-------TTTTTT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                217 13 +     11607 TG-GGATT-------TAGGAT
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104166 13 - 174332312 CA-GGATC-------TGGGAT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39809 14 +    559221 TGAAGATT-------TAGAAA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41289 13 -     51505 TG-GGTTC-------TATAGT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354293 13 +   1103335 TG-GGTTC-------TATAGT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404736 13 -  44047080 TG-GGATC-------TAGGAA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5255 13 +     17875 TG-GGATC-------TAGGAA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473333 13 - 189151597 TG-GGATT-------TGGGAT
i Pan_troglodytes.CM009242.2                             I 20 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25034 13 -    230217 TG-GGATT-------TAGAAA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462360 13 -  18783137 TG-GGATT-------TAGAAA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973019 13 +   8748460 TG-GGATT-------TAGAAA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616264 13 +   2937107 TG-GGATC-------TAGGAA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243965 13 - 183742232 TG-GGAGT-------TGGGAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10427 13 +     21308 TG-GGAGT-------TGGGAT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293000 13 -  20919399 TG-GGAGT-------TGGGAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23075 13 -     27687 TG-GGAGT-------TGGGAT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16221 13 +     16796 TG-GGAGT-------TGGGAT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23032 13 -     23640 TG-GGAGT-------TGGGAT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15632 13 +     78924 TG-GGATT-------TAGGAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27619 13 +     31479 TG-GGTTC-------TATGAT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            19988 13 -     24908 TG-GGTTC-------TATGAT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2359 13 +      9367 TG-GGATT-------TAAGAT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247399 13 +  18517816 TG-GGATC-------GAATCT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32486 13 -     56120 TG-AGTAC-------AAGGAT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159               4696 13 -     63832 TG-GGATC-------TAGGAA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3247 20 +     55023 TG-GGAGTTGGGAGTTGGGAT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2785 20 -     89929 TG-GGAGTTGGGAGTTGGGAT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3375 20 +     40849 TG-GGAGTTGGGAGTTGGGAT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255049 20 +  14605196 TG-GGAGTTGGGAGTTGGGAT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4558 13 +     22231 TA-GGATT-------TAGGAA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65372 13 +    207309 TG-GGATT-------TGGAAT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6464 13 -     25401 TG-GGATT-------TGGAAT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32208 13 +     58159 TG-GGATT-------TGGAAT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32484 13 +     63561 TG-GGATT-------TGGAAT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32244 13 +     51148 TG-GGATT-------TGGAAT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557214 13 -   4542175 TG-GGATT-------TGGAAT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32228 13 +     51125 TG-GGATT-------TGGAAT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1713 13 +     19503 TG-GGATC-------TAGAAA
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8639 13 +     39866 TG-AGGTT-------TGGAAT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3721 13 -      9282 TG-AGGTT-------TGGAAT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43125 13 -     87950 TG-AGGTT-------TGGAAT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43521 13 -     88961 TG-AGGTT-------TGGAAT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8217 13 -     39403 TG-AGGTT-------TGGAAT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43168 13 +     87928 TG-AGGTT-------TGGAAT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8216 13 -     60166 TG-AGGTT-------TGGAAT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15153 13 -     67232 TG-AGGTT-------TGGAAT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43069 13 -     90634 TG-AGGTT-------TGGAAT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44536 13 +     89403 TG-AGGTT-------TGGAAT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178442 13 - 189387572 TG-GGATT-------TGGGAT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193259 13 -   9816681 TG-GGATT-------TGGGAT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28396 20 +     69807 TG-GGAGTTGGGAGTTGGGAT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45577 20 -     80239 TG-GGAGTTGGGAGTTGGGAT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 3915 13 +      7663 TG-GGGTT-------CACGAT
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983159 13 +   4620579 TG-GGATC-------TGTGAT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566669 13 -   2598838 TG-GGATC-------TGTGAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4307 13 -      7103 TG-GGATC-------TGTGAT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4904 13 -     11706 TG-GGATC-------TGTGAT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8642 13 -     30655 TG-GGATC-------TGTGAT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34955 13 +     46564 TG-GGATC-------TGTGAT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95234 13 -     98465 TG-GGATC-------TGTGAT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8873 13 +     35169 TG-GGATC-------TGTGAT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38001 13 +     52041 TG-GGATC-------GAATAT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52713 13 -     66298 tg-ggatt-------taggaa
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5219 13 -     18639 TG-GGATT-------TAGGAA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841302 13 -  28871421 TG-GGATA-------TAGGAA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537817 13 -   4952924 TG-GGATA-------TAGGAA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099677 13 +  38429054 CG-GGATT-------TAGAAA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27772 13 +     91421 TG-GGAGTTGGG-------AT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154256 13 -   7812017 TG-GGAGTTGGG-------AT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8629 13 +     72585 TG-GGAGTTGGG-------AT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53749 13 +     55069 TG-GGATC-------TAAGAA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023285 13 -  90668790 TG-GGATC-------TAATAT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915282 13 +   3329780 tg-ggatc-------taggaa
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2350 20 +      7119 TG-GGAGTTGGGAGTTGGGAT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122966 20 + 195417433 TG-GGAGTTGGGAGTTGGGAT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237192 20 -   7961872 TG-GGAGTTGGGAGTTGGGAT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75381 13 -    116970 AA-AGATC-------TAGGAA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 34 C 0
s Saguinus_bicolor.k141_1429097                               4529 12 +     27962 TG-AG-TT-------TGGAAT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4423 12 +      6077 TG-AG-TT-------TGGAAT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4513 12 +      5971 TG-AG-TT-------TGGAAT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4434 12 +      5932 TG-AG-AC-------TGGAAT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2776 12 -      4390 TG-AG-AC-------TGGAAT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392213 12 - 209938924 TG-AG-TT-------TGGAAT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4382 12 +      5979 TG-AG-AC-------TGGATT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                952 12 -     22275 TG-AG-TT-------TGGAAT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8424 13 +     16473 TG-GGATC-------CAGGAA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109548 13 + 121099817 TG-GGATT-------TAGAAT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31115 13 -     47369 TG-GGATT-------TAGAAT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31501 13 -     79414 TG-GGATT-------TAGAAT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28192 13 -     34454 TG-GGATT-------TAGAAT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15593 13 -     22428 TG-GGATT-------TAGAAT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30747 13 -     47109 TG-GGATT-------TAGAAT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238793 13 +   5703754 TG-GGATT-------TGGAAT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8383 13 +     21866 TG-GGATT-------TGGAAT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116448 13 +    313613 TG-GGATC-------TAGGAT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26091 20 +     27374 TG-GGAGTTGGGAGTTGGGAT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29603 20 +     58920 TG-GGAGTTGGGAGTTGGGAT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16101 20 -     45317 TG-GGAGTTGGGAGTTGGGAT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23759 20 -     42441 TG-GGAGTTGGGAGTTGGGAT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26437 20 -     29113 TG-GGAGTTGGGAGTTGGGAT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29512 20 -     48123 TG-GGAGTTGGGAGTTGGGAT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49780 13 +     77746 TG-GGATA-------TAATCC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864718 13 -   1910179 TG-AAGTC-------TAGGAT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671835 13 +  18376816 TG-GGATA-------TAGGAA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868930 13 +   3870691 TG-GGATC-------TAGGTT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7309 13 -     97271 TG-GGATT-------TAGGAA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125445 13 +    196729 TG-GGATT-------TAGGAG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644330 13 +  69701581 TG-GGATC-------TAGGAA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391699 13 +   1523678 TG-GGATT-------TGGGAT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14879 13 +     22964 tg-ggatc-------taggaa
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3308 13 +      5583 TG-GGATC-------TAGAAT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192180 13 +    199430 TG-GGATC-------TAGGAA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106150 13 -    539355 TG-GGATC-------TAGGAA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1219 13 +      9917 TG-GGATC-------AAAGAT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8017 13 +     20590 TG-GGATC-------AAAGAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353951 13 - 186847797 TG-GGAGT-------TGGGAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24642 13 -     33621 TG-GATGT-------TAGGAT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_31955                   20300  7 -     31044 -------C-------TAGAAT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480706 13 -    610378 TG-GGATT-------TAGGAG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21636 20 +     26378 TG-GGAGTTGGGAGTTGGGAT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34312 20 -     78344 TG-GGAGTTGGGAGTTGGGAT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20961 20 +     25722 TG-GGAGTTGGGAGTTGGGAT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29268 20 -     62838 TG-GGAGTTGGGAGTTGGGAT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29312 20 +     46913 TG-GGAGTTGGGAGTTGGGAT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10121 20 -     28527 TG-GGAGTTGGGAGTTGGGAT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31203 20 -     64340 TG-GGAGTTGGGAGTTGGGAT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29241 20 -     63452 TG-GGAGTTGGGAGTTGGGAT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10688 20 +     22490 TG-GGAGTTGGGAGTTGGGAT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4111 20 -      6147 TG-GGAGTTGGGATTTGGGAT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11024 20 -     13050 TG-GGAGTTGGGAGTTGGGAT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256254 20 -   6242583 TG-GGAGTTGGGAGTTGGGAT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2282 20 +     19340 TG-GGAGTTGGGAGTTGGGAT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174037 13 -    200418 TG-GGATC-------TAAGAA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6481464 13 -  10818551 TG-GGCTC-------TAGGAT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834953 13 -   4065304 TG-GGATC-------TCGGAT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8973 13 -     70247 TG-GGATC-------TCGGAT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366283 13 -  33153633 TG-GGATC-------TAGGAA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4175 13 -     21056 TG-GGATA-------TAGGAT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Varecia_rubra.k141_787544                                  25811 13 -     30710 TG-GGATC-------TGTGAT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24718 13 -    147434 TG-GGATC-------TGTGAT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76865 13 +   5488506 TG-GGATC-------TAAGAA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105530 14 -    112863 TGAAGATT-------TAGAAA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174722 13 -    224448 TG-GGATC-------TAGGAT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29431 13 -     86975 tg-ggatt-------taggaa
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       549  2 -      1899 -------------------TT
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1567 13 +      2126 TG-GGATC-------TAGGAA
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Ursus_maritimus.KK499267.1                                182361 286 +   5085361 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6002 10 +     36723 AAGG-----------------C-A-TA----TA
s Acinonyx_jubatus.LLWD01001279.1                           813432 10 +   1699592 GAGA-----------------C-A-TA----CA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25678  4 +     63021 A-GA-----------------A-----------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415888  6 +  29979442 gaga-----------------c-a---------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 5
s Ailurus_fulgens.LNAC01001112.1                            216231 10 +    347723 gaga-----------------c-a-ta----ca
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 3
s Allactaga_bullata.AllBul_scaffold_20030                    18588  2 -     61208 -------------------------AA------
i Allactaga_bullata.AllBul_scaffold_20030                I 4 I 2
s Allenopithecus_nigroviridis.k141_3755588                   48647 10 +     53615 AAGA-----------------C-A-TA----TA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           678 10 +     13857 AAGA-----------------C-A-TA----TA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17229 10 -     21945 AAGA-----------------C-A-TA----TA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18914 10 +     32033 AAGA-----------------C-A-TA----TA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72748 10 -     84148 GAGA-----------------C-A-TA----TA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44987 10 -     78289 GAGA-----------------C-A-TA----TA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44426 10 +     55831 CAGA-----------------C-A-TA----TA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42876 10 -     64179 GAGA-----------------C-A-TA----TA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24510 10 -     24835 CAGA-----------------C-A-TA----TA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41501 10 +     45454 GAGA-----------------C-A-TA----TG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47150 10 +     70886 GAGA-----------------C-A-TA----TA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9323 10 +     30854 GAGA-----------------C-A-TA----TA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33457 10 +     42133 GAGA-----------------C-A-TA----TA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585882 10 +   2318259 GAAA-----------------C-A-TA----CA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177682 10 -    412891 aaga-----------------c-a-ta----CG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50989 10 -     68529 GAAA-----------------C-A-TA----CA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1714 10 +     17741 GAGA-----------------C-A-TA----TA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2339 10 -     15923 GAGA-----------------C-A-TA----TA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672621 10 +   5030052 GAGA-----------------C-A-TA----TA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2615 10 -     16391 GAGA-----------------C-A-TA----TA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2174 10 -     17186 GAGA-----------------C-A-TA----TA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16693 13 -     32367 A-AA-----------------A-C-AGTAATGA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 3
s Arctocebus_calabarensis.k141_1364444                       20792  8 -     45910 TAGA-----------------C-A-AA------
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5948 10 -     15198 AAGA-----------------C-A-TG----CA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275211 10 +  21539123 GAGA-----------------C-A-TA----TA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11379 10 +     48076 GAGA-----------------C-A-TA----TA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6514 10 -     28759 GAGA-----------------C-A-TA----TA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34068 10 +     44353 GAGA-----------------C-A-TA----TA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49439 10 -     71267 GAGA-----------------C-A-TA----TA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23497 10 -     33135 GAGA-----------------C-A-TA----TA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6787 10 +     11645 GAGA-----------------T-A-TG----TA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6795 10 -     19611 GAGA-----------------T-A-TG----TA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964032 10 -  23207421 GAGA-----------------C-A-TA----CA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          532 10 -     25979 GAGA-----------------C-A-TA----CA
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86890 10 +    124022 GAAA-----------------C-A-TA----CA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22432 10 +    288883 GAAA-----------------C-A-TA----CA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356822 10 +  48749331 GAAA-----------------C-A-TA----CA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755386 10 +   1948126 GAAA-----------------C-A-TA----CA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545528 10 -  45695690 GAAA-----------------C-A-TA----CA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530543 10 -   4408762 GAAA-----------------C-A-TA----CA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8387 10 +     28062 GAGA-----------------C-A-TA----CA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43681 10 -     91139 GAGA-----------------C-A-TA----CA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21207 10 +     95584 GAGA-----------------C-A-TA----CA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21120 10 +    119600 GAGA-----------------C-A-TA----CA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10694 10 +     18648 GAGA-----------------C-A-TA----TA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10229 10 -     13885 GAGA-----------------C-A-TA----TA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2299 10 -      8861 CAGA-----------------C-A-TA----TA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454691 10 + 189096842 CAGA-----------------C-A-TA----TA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2214 10 +      8664 CAGA-----------------C-A-TA----TA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631547 10 +  17673402 GAGA-----------------T-A-TA----CA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665833 10 +   7040546 GAGA-----------------T-A-TA----CA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209493 10 +   1652518 GAGA-----------------T-A-TA----CA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505913 10 +  60362399 GAGA-----------------C-A-TA----CA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9549 10 -     23171 GAGA-----------------C-A-TA----CA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222892 10 +   9314153 GAGA-----------------C-A-TA----CA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616027 10 +  59632846 GAGA-----------------C-A-TA----CA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107608 10 -  63665305 GAGA-----------------C-A-TA----CA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409611 10 -  46296322 GAAA-----------------C-A-TA----CA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591885 10 +  44709034 GAAA-----------------C-A-TA----CA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                     52  9 -      1607 -----------------------A-CACAAAAA
i Capromys_pilorides.CapPil_scaffold_762519              I 3 C 0
s Carlito_syrichta.NW_007259797.1                           270999 10 +    496798 Gaca-----------------c-a-ta----ta
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                804 10 +      9923 AAGA-----------------C-G-TA----CA
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28206 14 -     39886 G-GA-----------------ACA-TACACTCA
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     80086 10 -    217609 GAGA-----------------C-A-TA----CA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996939  9 +  23392119 -----------------------N-NNNNNNNN
i Cavia_aperea.AVPZ01000300.1                            I 3 C 0
s Cavia_porcellus.DS562891.1                               5000380  9 +  23407841 -----------------------A-CACAAAAA
i Cavia_porcellus.DS562891.1                             I 3 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63461  9 -     66877 -----------------------A-CACAAAAA
i Cavia_tschudii.CavTsc_scaffold_23560                   I 3 C 0
s Cebuella_niveiventris.k141_592277                           5612 10 -     12580 GAGA-----------------C-A-TA----TA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43669 10 +     53515 GAGA-----------------C-A-TA----TA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373432 10 -  26074798 GAGA-----------------C-A-TA----TA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8486 10 -     34880 GAGA-----------------C-A-TA----TA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67582 10 -     89041 GAGA-----------------C-A-TA----TA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2959 10 -      5494 GACA-----------------C-A-TA----TA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492717 10 -  27778364 GAGA-----------------C-T-TA----CA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19550 10 +     27315 GAGA-----------------C-T-TA----CA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141796 10 -   4669795 AAGA-----------------C-A-TA----CA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45539 10 +     47900 AAGA-----------------C-A-TA----TA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            968 10 -     14410 AAGA-----------------C-A-TA----CA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45352 10 -    148725 AAGA-----------------C-A-TA----CA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27561 10 -     40656 AAGA-----------------C-A-TA----TA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7525 10 +     20796 AAGA-----------------C-A-TA----TA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12643 10 -     17524 AAGA-----------------C-A-TA----TA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28366 10 -     34525 AAGA-----------------C-A-TA----TA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12146 10 -     25376 AAGA-----------------C-A-TA----TA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364733 10 -  39242232 AAGA-----------------C-A-TA----TA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270460 10 +  21565898 AAGA-----------------C-A-TA----TA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32828 10 -     45857 AAGA-----------------C-A-TA----CA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27729 10 -     32606 AAGA-----------------C-A-TA----TA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3891 10 +      8499 AAGA-----------------C-A-TA----TA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26287 10 +     70610 AAGA-----------------C-A-TA----TA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23248 10 +     36323 AAGA-----------------C-A-TA----TA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13228 10 -     19938 GAGG-----------------C-A-TA----TA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31161 10 -     33796 GAGA-----------------T-A-TA----TA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5678  5 -     15404 CAAA-----------------C-----------
i Cheirogaleus_medius.k141_759766                        C 0 I 2
s Cheracebus_lucifer.k141_2312002                             9487 10 -     32913 CAGA-----------------C-A-TA----TA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19900 10 -     40346 CAGA-----------------C-A-TA----TA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20155 10 +    216457 CAGA-----------------C-A-TA----TA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19948 10 +     39636 CAGA-----------------C-A-TA----TA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239292  9 -   2543920 -----------------------A-CACAAAAA
i Chinchilla_lanigera.JH722012.1                         I 3 C 0
s Chiropotes_albinasus.k141_1946120                           4543 10 +      5346 GAGA-----------------C-A-TA----CA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43018 10 -    112038 GAGA-----------------C-A-TA----CA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chlorocebus_aethiops.ctg25                                344149 10 +  18827391 AAGA-----------------C-A-TA----TA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10693 10 -     44032 AAGA-----------------C-A-TA----TA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305474 10 - 135778131 AAGA-----------------C-A-TA----TA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15358 10 +     15858 AAGG-----------------C-A-TA----CA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606933 10 -    839153 aagg-----------------c-a-ta----ca
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2052  6 +      2406 GAGA-----------------C-A---------
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409879 10 -   2368649 AAGA-----------------C-A-TA----TA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379760 10 - 200372422 AAGA-----------------C-A-TA----TA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3317 10 -     84244 AAGA-----------------C-A-TA----TA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807757 10 +  53390261 GAGA-----------------C-A-TA----CA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3312 10 -      8242 GAAC-----------------C-A-TA----CA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115398  2 - 224834208 -------------------------ca------
i Cricetulus_griseus.LT883664.1                          I 4 I 1
s Cricetomys_gambianus.CriGam_scaffold_14425                 44814  4 -     83289 A-GA-----------------A-----------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 3
s Crocidura_indochinensis.CroInd_scaffold_77846               9914 10 +     12657 TATA-----------------C-A-TA----TA
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4885 10 +     87169 GGGA-----------------C-A-TA----TA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645935 13 -   1526836 G-GA-----------------C-A-CACAAACA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18842  8 +     50838 -----------------------A-CACGA-AA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 3 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4856  9 +     36344 -----------------------A-CACAAAAA
i Cuniculus_paca.CunPac_flattened_line_7025              I 3 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28632  9 +     75252 -----------------------A-CACAAAAA
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 3 C 0
s Dasypus_novemcinctus.JH564415.1                          2110584 10 -   2246927 GAGG-----------------C-A-TA----TA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293097 10 +  12879189 GAGA-----------------T-A-TA----TA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632440 10 -  35494412 AAGA-----------------T-G-TA----CA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              330999 10 -   2620052 GAGG-----------------C-A-TA----CA
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665001 10 -   1390856 GAGA-----------------C-C-TA----CA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139794 10 -    198055 GAGA-----------------C-T-TA----CA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99380  9 -    115145 -----------------------A-CACAAAAA
i Dinomys_branickii.DinBra_scaffold_10381                I 3 C 0
s Dipodomys_ordii.KN672350.1                              18951019 14 -  37912305 G-GA-----------------ATA-TACACTCA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   5945 14 -     10735 G-GA-----------------ATA-TACACTCA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856074 10 - 111700974 GAGA-----------------C-A-TCT----G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6775 10 +     19438 gaga-----------------c-a-ta----ca
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240252 10 -    607251 GAAA-----------------C-A-TA----CA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226274 10 +  10337057 GAAG-----------------C-AGTC-----A
i Elephantulus_edwardii.JH947257.1                       I 46 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31536  4 +    110024 A-GA-----------------A-----------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 3
s Ellobius_talpinus.LOJH01026522.1                           13507  4 +     18970 A-GA-----------------A-----------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 3
s Enhydra_lutris.KZ291758.1                               24916637 10 +  41312741 GAGA-----------------C-A-TA----CA
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Eptesicus_fuscus.JH977646.1                             12579422 10 +  14770903 aaga-----------------c-a-ta----CA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041915 10 -   4378816 aaga-----------------c-a-ta----ca
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375853 10 +  39960074 AAGA-----------------C-A-TA----CA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411760 10 -    498745 AAGA-----------------C-C-TA----CA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666571 10 +   7059049 aaaa-----------------c-a-tt----ac
i Erinaceus_europaeus.JH835339.1                         C 0 I 2
s Erythrocebus_patas.Contig38                               263685 10 +  21539334 AAGA-----------------C-A-TA----TA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71646 10 -    133382 GAGA-----------------C-A-TA----CA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_705718              222 10 +       377 GAGA-----------------C-A-TA----CA
i Eubalaena_japonica.EubJap_flattened_line_705718        C 0 C 0
s Eulemur_albifrons.k141_51491                               15306 10 -     24895 GAGA-----------------T-A-TA----TA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43016 10 -     70999 GAGA-----------------T-A-TA----TA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86986 10 +    112731 GAGA-----------------T-A-TA----TA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43549 10 +     68309 GAGA-----------------T-A-TA----TA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53873 10 -     65740 GAGA-----------------T-A-TA----TA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24505 10 -     75513 GAGA-----------------T-A-TA----TA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48700 10 -     97555 GAGA-----------------T-A-TA----TA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5424 10 +     30972 GAGA-----------------T-A-TA----TA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43144 10 -     52037 GAGA-----------------T-A-TA----TA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59547 10 -    111500 GAGA-----------------T-A-TA----TA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247341 10 - 206538554 GAGA-----------------C-A-TA----CA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117127 10 - 205367284 GAGA-----------------C-A-TA----CA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28224 10 -     30238 GAGA-----------------C-A-TA----CA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916937  9 -   3816255 -----------------------A-CACAAAAA
i Fukomys_damarensis.KN121974.1                          I 3 C 0
s Galago_moholi.ctg3793                                     126156 10 -    137831 GAGA-----------------C-A-GA----TA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9701 10 +     22493 GAGA-----------------C-A-GA----TA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21771 10 -     32986 GAGA-----------------C-A-GA----TA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1673 10 -     28519 GAGA-----------------C-A-TA----TA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91955 10 -     95226 GAAA-----------------C-A-TA----CA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            34987 23 -     36801 G-GAACACACACATGCACACAA-A-C-------
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6302 10 -      8343 AAGG-----------------C-A-TA----TA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255317 10 - 186649187 AAGG-----------------C-A-TA----TA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2486  6 -     78134 G-GA-----------------A-A-C-------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15231 10 -     40692 GAGA-----------------T-A-TA----TA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36633 10 +     49394 GAGA-----------------T-A-TA----TA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61501 10 -     66874 GAGA-----------------T-A-TA----TA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10375 10 -     42923 GAGA-----------------T-A-TA----TA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17374 10 -     53142 GAGA-----------------T-A-TA----TA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31317 10 -    327341 ggga-----------------c-a-ta----ta
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9629 10 +     48891 GAAA-----------------C-A-TA----CA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932914  9 -  22651954 -----------------------A-CACAAATA
i Heterocephalus_glaber.JH602082.1                       I 3 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                4026 10 +      4291 TAGC-----------------C-A-TA----CA
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8141 10 -     36432 GAGA-----------------C-A-TA----CA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552133 10 -   1711038 gaga-----------------t-a-ca----ca
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1571 10 -      2730 GAGA-----------------C-A-CA----CA
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143326 10 -    630532 AAGA-----------------C-A-TA----TA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70482 10 +     83186 GGGA-----------------C-A-TA----TA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72376  9 +    143317 -----------------------A-CACAAAAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3 C 0
s Hylobates_agilis.k141_1155965                               6360 10 +     12352 AAGA-----------------C-A-TA----TA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13544 10 +     55766 AAGA-----------------C-A-TA----TA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053144 10 + 191637585 AAGA-----------------C-A-TA----TA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802022 10 +  11177569 AAGA-----------------C-A-TA----TA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7661  9 -    135385 -----------------------A-CACAAAAA
i Hystrix_cristata.HysCri_scaffold_5660                  I 3 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387365 13 +   7955117 A-AA-----------------A-T-AACAATGA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 6
s Indri_indri.k141_2415743                                    2931 10 +     11955 GAGA-----------------T-A-TG----TA
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10541 10 -     16823 GAGA-----------------C-G-TA----CA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240367  2 +   9596543 -------------------------CA------
i Jaculus_jaculus.JH725527.1                             I 4 I 2
s Kogia_breviceps.KogBre_flattened_line_3970                 72381 10 -     97402 GAGA-----------------C-G-TA----GA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43764 10 +    110728 GAGA-----------------C-A-TA----TA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63394 10 -     65777 aaga-----------------c-a-ta----ca
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760024 10 +  30322482 GAGA-----------------T-A-TA----TA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4667 10 -     13097 GAGA-----------------C-A-TA----CG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4421 10 +      5940 GAGA-----------------C-A-TA----CA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4244 10 -      5717 GAGA-----------------C-A-TA----CA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10634 10 -     11567 GAGA-----------------C-A-TA----TA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12015 10 -     12945 GAGA-----------------C-A-TA----TA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9537 10 +     29618 GAGA-----------------T-A-TA----TA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9533 10 +     31569 GAGA-----------------T-A-TA----TA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9543 10 +     24756 GAGA-----------------T-A-TA----TA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9543 10 +     16388 GAGA-----------------T-A-TA----TA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814019 10 -   3914936 GAGA-----------------C-A-TA----CA
i Leptonychotes_weddellii.KB714746.1                     C 0 I 3
s Lepus_americanus.LepAme_scaffold_56121                     18385 10 +     24238 AGGA-----------------C-A-CA----TA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341726 10 +    662738 GAGA-----------------C-G-TA----CA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334681 10 -   1826925 AAGA-----------------C-A-TA----TA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11853 10 +     19643 GAGA-----------------C-A-GA----TA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045523 10 -   6120653 GAGA-----------------C-A-GA----TA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39084711 10 +  43346337 gagc-----------------c-a-ca----ca
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615182 10 +  59628241 GAGA-----------------C-A-TA----CA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46070 10 -     61512 AAGA-----------------C-A-TA----TA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373732 10 -  60120075 AAGA-----------------C-A-TA----TA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26000 10 +     30207 AAGA-----------------C-A-TA----TA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             838 10 -      5035 AAGA-----------------C-A-TA----TA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25953 10 +     30527 AAGA-----------------C-A-TA----TA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37129 10 -     50087 AAGA-----------------C-A-TA----TA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46873 10 +     51645 AAGA-----------------C-A-TA----TA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416076 10 - 187317192 AAGA-----------------C-A-TA----TA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400306 10 +  25927173 AAGA-----------------C-A-TG----TA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49478 10 -     62418 AAGA-----------------C-A-TA----TA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2009 10 +     14901 AAGA-----------------C-A-TA----TA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45950 10 +     59329 AAGA-----------------C-A-TA----TA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271858 10 +    668171 AAGA-----------------C-A-TA----TA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   496 10 -      5049 AAGA-----------------C-A-TA----TA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3656 10 +     17132 AAGA-----------------C-A-TA----TA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223742 10 -    270270 gaga-----------------c-a-ta----CA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323146 10 +  24302211 AAGA-----------------C-A-TA----TA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357977 10 -    752769 AAGA-----------------C-A-TA----TA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674072  8 -    737560 aaga-----------------c-a-ta------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221368  8 +    317179 aaga-----------------c-a-ta------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501583 13 +  40650429 a-aa-----------------a-c-aacaatga
i Marmota_marmota.CZRN01000018.1                         C 0 I 6
s Megaderma_lyra.MegLyr_scaffold_4542                       150915  3 +    207569 GAG------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_19308             26736 10 -     74585 GAGA-----------------C-A-TA----CA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 3
s Meriones_unguiculatus.MerUng_scaffold_7390                 50715  4 -    140813 A-GA-----------------A-----------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 3
s Mesocricetus_auratus.KB708134.1                         17429774  4 +  29670104 A-GA-----------------A-----------
i Mesocricetus_auratus.KB708134.1                        C 0 I 3
s Mesoplodon_bidens.MesBid_scaffold_6114                     88010 10 +     93471 GAGA-----------------C-G-TA----CA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10801 10 +     17804 GAGA-----------------C-A-TA----TA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11301 10 -     12984 GAGA-----------------C-A-TA----TA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19617 10 -     26561 GAGA-----------------C-A-TA----TA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985374 10 +  93316391 GAGA-----------------T-A-TA----TA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47309 10 +    145209 TCGA-----------------C-G-TCT----G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185601 10 +    200668 AATA-----------------C-A-TA----CA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962981  4 +  27267610 A-GA-----------------A-----------
i Microtus_ochrogaster.CM001695.1                        C 0 I 3
s Miniopterus_natalensis.LDJU01000034.1                    6363757 10 -   8254450 aaga-----------------c-a-ta----ca
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42664 10 -     48117 aaga-----------------c-a-ta----ca
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23180 10 -     27822 AAGA-----------------C-A-TA----TA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9030 10 +     27589 GAGA-----------------C-A-TG----CA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 3
s Mirza_zaza.k141_766280                                     53157 10 -     62432 GAGA-----------------T-A-TA----TA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360115 10 +    437263 GAGA-----------------T-G-TA----CA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179833 10 +    366855 aaga-----------------c-a-tg----ca
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26077 10 -     82753 GAAA-----------------C-A-TA----CA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19042 10 -     63510 GGGA-----------------C-A-TA----TA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39726 10 +     47283 AAGA-----------------C-A-TA----CA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593693  4 + 120012414 A-GA-----------------A-----------
i Mus_caroli.LT608237.1                                  C 0 I 3
s Mus_musculus.chr8                                       41688082  4 + 129401213 A-GA-----------------A-----------
i Mus_musculus.chr8                                      C 0 I 3
s Mus_spretus.CM004101.1                                  39497376  4 + 130317789 A-GA-----------------A-----------
i Mus_spretus.CM004101.1                                 C 0 I 3
s Muscardinus_avellanarius.MusAve_scaffold_12866             84042  6 -     86153 G-GA-----------------A-A-C-------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355658 10 +  14710649 GAGA-----------------C-A-TA----CA
i Mustela_putorius.JH418006.1                            C 0 I 3
s Myocastor_coypus.MyoCoy_scaffold_15261                     63624  9 +     67721 -----------------------A-CCCAAAAA
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 3 C 0
s Myotis_brandtii.KE162005.1                               9793981 10 +  10118263 aaga-----------------c-a-ta----CA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388154 10 +   6019432 aaga-----------------c-a-ta----CA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383942 10 +   4330536 aaga-----------------c-a-ta----CA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2751 10 +     18357 aaga-----------------c-a-tC----CA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120330 10 +    130748 GAGG-----------------C-A-TA----CA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946846  4 +   3037898 g-aa-----------------a-----------
i Nannospalax_galili.KL204047.1                          C 0 I 4
s Nasalis_larvatus.k141_1350636                              29836 10 +     34575 AAGA-----------------C-A-TA----TA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232791 10 -   7148211 GAGA-----------------T-G-TA----CA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128798 10 -    149072 aaga-----------------c-a-ta----CA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54252 10 -    132029 AAGA-----------------C-A-TA----TA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10347 10 -     16345 AAGA-----------------C-A-TA----TA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16232 10 +     22201 AAGA-----------------C-A-TA----TA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414453 10 -  22158432 AAGA-----------------C-A-TA----TA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26630 10 -     54323 AAGA-----------------C-A-TA----TA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198778 10 +   9404916 GAGA-----------------C-A-TA----CA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638753 10 + 196305487 GAGA-----------------C-A-GA----TA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1356 10 -      9413 GAGA-----------------C-A-GA----TA
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566133 10 - 199412804 GAGA-----------------C-A-GA----TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557444 10 -   3988456 CGGA-----------------T-G-TA----TA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055580  9 -  11899542 -----------------------a-cacagaaa
i Octodon_degus.JH651603.1                               I 3 C 0
s Odobenus_rosmarus.KB229312.1                             1452236 10 +   2017862 GAGA-----------------C-A-TA----CA
i Odobenus_rosmarus.KB229312.1                           C 0 I 3
s Odocoileus_virginianus.KZ100018.1                         436845 10 -    630418 GAAA-----------------C-A-TA----CA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15039 10 +    150152 GAAA-----------------C-A-TA----CA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93333  4 -    140218 A-GA-----------------A-----------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_28377                    4202  4 -     41509 A-GA-----------------A-----------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 3
s Orcinus_orca.KB316932.1                                  8103183 10 +  10937097 GAGA-----------------T-G-TA----CA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                230  9 +     11607 GACA-----------------C-A-TA-----A
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104179 10 - 174332312 AGGA-----------------C-A-CA----TA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39823 10 +    559221 GAGA-----------------C-A-TA----CA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41302 10 -     51505 GAGA-----------------C-A-GA----TA
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354306 10 +   1103335 GAGA-----------------C-A-GA----TA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404749 10 -  44047080 GAAA-----------------C-A-TA----CA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5268 10 +     17875 GAAA-----------------C-A-TA----CA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473346 10 - 189151597 AAGG-----------------C-A-TA----TA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25047 10 -    230217 GAGA-----------------C-A-TA----CA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462373 10 -  18783137 GAGA-----------------C-A-TA----CA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973032 10 +   8748460 GAGA-----------------C-A-TA----CA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616277 10 +   2937107 GAAA-----------------C-A-TA----CA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243978 10 - 183742232 AAGA-----------------C-A-TA----TA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10440 10 +     21308 AAGA-----------------C-A-TA----TA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293013 10 -  20919399 AAGA-----------------C-A-TA----TA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23088 10 -     27687 AAGA-----------------C-A-TA----TA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16234 10 +     16796 AAGA-----------------C-A-TA----TA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23045 10 -     23640 AAGA-----------------C-A-TA----TA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15645 10 +     78924 GAGA-----------------T-A-TA----TA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27632 10 +     31479 TAGA-----------------C-A-GA----TG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20001 10 -     24908 TAGA-----------------C-A-GA----TG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2372 14 +      9367 G-GA-----------------ATA-TACAGTCA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32502  9 -     56120 -----------------------A-CACAAAAA
i Petromus_typicus.PetTyp_scaffold_17301                 I 3 C 0
s Peromyscus_maniculatus.KI615324.1                         247412  4 +  18517816 A-GA-----------------A-----------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159               4709 10 -     63832 GAGA-----------------T-G-TA----CA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3267 10 +     55023 AAGA-----------------C-A-TA----TA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2805 10 -     89929 AAGA-----------------C-A-TA----TA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3395 10 +     40849 AAGA-----------------C-A-TA----TA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255069 10 +  14605196 AAGA-----------------C-A-TA----TA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4571 10 +     22231 AAGA-----------------C-A-TA----CA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65385 10 +    207309 GAGA-----------------C-A-TA----CA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6477 10 -     25401 GAGA-----------------C-A-TA----CA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32221 10 +     58159 GAGA-----------------C-A-TA----CA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32497 10 +     63561 GAGA-----------------C-A-TA----CA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32257 10 +     51148 GAGA-----------------C-A-TA----CA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557227 10 -   4542175 GAGA-----------------C-A-TA----CA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32241 10 +     51125 GAGA-----------------C-A-TA----CA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1726 10 +     19503 TAGA-----------------C-A-TA----CA
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8652 10 +     39866 GAGA-----------------C-A-TA----TA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3734 10 -      9282 GAGA-----------------C-A-TA----TA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43138 10 -     87950 GAGA-----------------C-A-TA----TA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43534 10 -     88961 GAGA-----------------C-A-TA----TA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8230 10 -     39403 GAGA-----------------C-A-TA----TA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43181 10 +     87928 GAGA-----------------C-A-TA----TA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8229 10 -     60166 GAGA-----------------C-A-TA----TA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15166 10 -     67232 GAGA-----------------C-A-TA----TA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43082 10 -     90634 GAGA-----------------C-A-TA----TA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44549 10 +     89403 GAGA-----------------C-A-TA----TA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178455 10 - 189387572 AAGG-----------------C-A-TA----TA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193272 10 -   9816681 AAGG-----------------C-A-TA----TA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28416 10 +     69807 AAGA-----------------C-A-TA----TA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45597 10 -     80239 AAGA-----------------C-A-TA----TA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 3928 10 +      7663 TAGC-----------------C-A-TA----CA
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983172 10 +   4620579 GAGA-----------------T-A-TA----TA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566682 10 -   2598838 GAGA-----------------T-A-TG----TA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4320 10 -      7103 GAGA-----------------T-A-TG----TA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4917 10 -     11706 GAGA-----------------T-A-TG----TA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8655 10 -     30655 GAGA-----------------T-A-TG----TA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34968 10 +     46564 GAGA-----------------T-A-TG----TA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95247 10 -     98465 GAGA-----------------T-A-TG----TA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8886 10 +     35169 GAGA-----------------T-A-TG----TA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38014  4 +     52041 A-GA-----------------A-----------
i Psammomys_obesus.NESX01036366.1                        C 0 I 3
s Pteronotus_parnellii.KE847780.1                            52726 10 -     66298 aaga-----------------c-a-tg----ca
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5232 10 -     18639 GAGA-----------------C-A-GA----CA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 3
s Pteropus_alecto.KB030862.1                               5841315 10 -  28871421 GAAA-----------------C-A-TA----CA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537830 10 -   4952924 GAAA-----------------C-A-TA----CA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099690 10 +  38429054 GAGA-----------------C-C-TA----CA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27785 10 +     91421 AAGA-----------------C-A-TA----TA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154269 10 -   7812017 AAGA-----------------C-A-TA----TA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8642 10 +     72585 AAGA-----------------C-A-TA----TA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53762 10 +     55069 GAAA-----------------C-A-TA----CA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023298  4 -  90668790 A-GA-----------------A-----------
i Rattus_norvegicus.chr16                                C 0 I 3
s Rhinolophus_sinicus.LVEH01000134.1                       2915295 10 +   3329780 gaga-----------------c-a-ta----ca
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2370 10 +      7119 AAGA-----------------C-A-TA----TA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122986 10 + 195417433 AAGA-----------------C-A-TA----TA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237212 10 -   7961872 AAGA-----------------C-A-TA----TA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75394 10 -    116970 GAGA-----------------C-A-TA----Ca
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 420
s Saguinus_bicolor.k141_1429097                               4541 10 +     27962 GAGA-----------------C-A-TA----CA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4435 10 +      6077 GAGA-----------------C-A-TA----CA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4525 10 +      5971 GAGA-----------------C-A-TA----CA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4446 10 +      5932 GAGA-----------------C-A-TA----CA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2788 10 -      4390 GAGA-----------------C-A-TA----CA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392225 10 - 209938924 GAGA-----------------C-A-TA----CA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4394 10 +      5979 GAGA-----------------C-A-TA----CA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                964 10 -     22275 GAGA-----------------C-A-TA----CA
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8437 10 +     16473 GAAA-----------------C-A-TA----CA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109561 10 + 121099817 GAGA-----------------C-A-TA----TA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31128 10 -     47369 GAGA-----------------C-A-TA----TA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31514 10 -     79414 GAGA-----------------C-A-TA----TA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28205 10 -     34454 GAGA-----------------C-A-TA----TA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15606 10 -     22428 GAGA-----------------C-A-TA----TA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30760 10 -     47109 GAGA-----------------C-A-TA----TA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238806 10 +   5703754 GAGA-----------------C-T-TA----TA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8396 10 +     21866 GAGA-----------------C-T-TA----TA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116461 10 +    313613 GAGA-----------------C-A-TA----CA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26111 10 +     27374 AAGA-----------------C-A-TA----TA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29623 10 +     58920 AAGA-----------------C-A-TA----TA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16121 10 -     45317 AAGA-----------------C-A-TA----TA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23779 10 -     42441 AAGA-----------------C-A-TA----TA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26457 10 -     29113 AAGA-----------------C-A-TA----TA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29532 10 -     48123 AAGA-----------------C-A-TA----TA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49793  4 +     77746 A-GA-----------------A-----------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_126            1864731 10 -   1910179 GAGA-----------------T-G-TA----TA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 2
s Sorex_araneus.JH798187.1                                 4671848 10 +  18376816 AACA-----------------C-a-ta----aa
i Sorex_araneus.JH798187.1                               C 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1868943 13 +   3870691 A-AA-----------------A-C-AACAATGA
i Spermophilus_dauricus.KZ294078.1                       C 0 I 6
s Spilogale_gracilis.SpiGra_flattened_line_13525              7322 10 -     97271 GAGG-----------------C-A-TG----CA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_6629             125458 10 +    196729 GGGA-----------------C-A-TA----TA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644343 10 +  69701581 GAGA-----------------C-A-TA----CA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391712 10 +   1523678 AAGA-----------------C-A-TA----TA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14892 10 +     22964 aaga-----------------c-a-ta----ca
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3321 10 +      5583 GAGG-----------------C-A-TA----CA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192193 10 +    199430 GAGT-----------------C-C-CA----TA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106163 10 -    539355 GAGT-----------------C-C-TA----TA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1232  9 +      9917 GACA-----------------C-A-TA----T-
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8030  9 +     20590 GACA-----------------C-A-TA----T-
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353964 10 - 186847797 AAGA-----------------C-A-TA----TA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24658  9 -     33621 -----------------------A-CACAAAAA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 3 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20307 10 -     31044 GAGG-----------------C-A-TA----TA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480719 10 -    610378 AAGA-----------------C-A-TA----CA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21656 10 +     26378 AAGA-----------------C-A-TA----TA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34332 10 -     78344 AAGA-----------------C-A-TA----TA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20981 10 +     25722 AAGA-----------------C-A-TA----TA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29288 10 -     62838 AAGA-----------------C-A-TA----TA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29332 10 +     46913 AAGA-----------------C-A-TA----TA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10141 10 -     28527 AAGA-----------------C-A-TA----TA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31223 10 -     64340 AAGA-----------------C-A-TA----TA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29261 10 -     63452 AAGA-----------------C-A-TA----TA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10708 10 +     22490 AAGA-----------------C-A-TA----TA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4131 10 -      6147 AAGA-----------------C-A-TA----TA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11044 10 -     13050 AAGA-----------------C-A-TA----TA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256274 10 -   6242583 AAGA-----------------C-A-TA----TA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2302 10 +     19340 AAGA-----------------C-A-TA----TA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174050 10 -    200418 GAAA-----------------C-A-TA----CA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6481477 10 -  10818551 GAGA-----------------A-A-TA----CA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834966 10 -   4065304 GAGA-----------------C-A-TA----TA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8986 10 -     70247 GAGA-----------------C-A-TA----TA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366296 10 -  33153633 GAGA-----------------T-G-TA----CA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4188 10 -     21056 GAAA-----------------C-A-TA----CA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Varecia_rubra.k141_787544                                  25824 10 -     30710 GAGA-----------------T-A-TA----TA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24731 10 -    147434 GAGA-----------------T-A-TA----TA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76878 10 +   5488506 GAGA-----------------T-A-TA----CA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105544 10 -    112863 GAGA-----------------C-A-TA----CA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174735 13 -    224448 A-AA-----------------A-C-AACAATGA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 6
s Zalophus_californianus.ZalCal_flattened_line_17732         29444 10 -     86975 gaga-----------------c-a-ta----ca
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_286923                       553  2 -      1899 -------------------------CA------
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 2 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1580 10 +      2126 GAGA-----------------C-G-TA----CA
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Ursus_maritimus.KK499267.1                                182361 286 +   5085361 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Chiropotes_sagulatus.k141_1113111                           8584  0 +     34062 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6012 18 +     36723 A----A---G-A-AT-AACTTT--AC---T-A-A---A
s Acinonyx_jubatus.LLWD01001279.1                           813442 19 +   1699592 A----A---G-A-AC-AACTCC--AT---T-A-GA--A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25685 15 +     63021 ---------CCC-AC-AAATCC--AC---A-T------
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 3 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415899 11 +  29979442 ----------------aactcc--at---a-a-a----
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 5 I 5
s Ailurus_fulgens.LNAC01001112.1                            216244 13 +    347723 ----------------aactcc--at---a-a-a--aa
i Ailurus_fulgens.LNAC01001112.1                         I 3 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18592 17 -     61208 -----C---A-C-AC-AAATTC--AT---A-T-A---A
i Allactaga_bullata.AllBul_scaffold_20030                I 2 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48657 18 +     53615 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           688 18 +     13857 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17239 18 -     21945 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18924 18 +     32033 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72758 18 -     84148 A----A---G-A-AT-AACTTC--CT---T-A-A---A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               44997 18 -     78289 A----A---G-A-AT-AACTTC--CT---T-A-A---A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44436 18 +     55831 A----A---G-A-AT-AACTTC--CT---T-A-A---A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42886 18 -     64179 A----A---G-A-AT-AACTTC--CT---T-A-A---A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24520 18 -     24835 A----A---G-A-AT-AACTTC--CT---T-A-A---A
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41511 18 +     45454 A----A---G-A-AT-AACTTC--CT---T-A-A---A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47160 18 +     70886 A----A---G-A-AT-AACTTC--CT---T-A-A---A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9333 18 +     30854 A----A---G-A-AT-AACTTC--CT---T-A-A---A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33467 18 +     42133 A----A---G-A-AT-AACTTC--CT---T-A-A---A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585892 18 +   2318259 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177692 19 -    412891 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             50999 18 -     68529 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1724 18 +     17741 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2349 18 -     15923 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672631 18 +   5030052 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2625 18 -     16391 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2184 18 -     17186 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16709 12 -     32367 --------------C-AACTTC--AC---A-A-A----
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 3 C 0
s Arctocebus_calabarensis.k141_1364444                       20800 14 -     45910 ---------G-A-CC-AATTTTA-AA---A--------
i Arctocebus_calabarensis.k141_1364444                   C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5958 19 -     15198 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275221 18 +  21539123 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11389 18 +     48076 A----A---G-A-AT-AACTTC--AT---G-A-A---A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6524 18 -     28759 A----A---G-A-AT-AACTTC--AT---G-A-A---A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34078 18 +     44353 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49449 18 -     71267 A----A---G-A-AT-AACTTC--AT---G-A-A---A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23507 18 -     33135 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6797 19 +     11645 A----A---G-A-AC-AACTTG--AC---AAT-A---A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6805 19 -     19611 A----A---G-A-AC-AACTTG--AC---AAT-A---A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964042 19 -  23207421 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          542 19 -     25979 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86900 18 +    124022 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22442 18 +    288883 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356832 18 +  48749331 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755396 18 +   1948126 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545538 18 -  45695690 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530553 18 -   4408762 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8397 18 +     28062 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43691 18 -     91139 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21217 18 +     95584 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21130 18 +    119600 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10704 18 +     18648 A----A---G-A-AT-AACTTC--AT---T-G-A---A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10239 18 -     13885 A----A---G-A-AT-AACTTC--AT---T-C-A---A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2309 18 -      8861 A----A---G-A-AT-AACTTC--AT---T-G-A---A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454701 18 + 189096842 A----A---G-A-AT-AACTTC--AT---T-G-A---A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2224 18 +      8664 A----A---G-A-AT-AACTTC--AT---T-G-A---A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631557 18 +  17673402 A----A---G-A-AC-AACTTC--GT---A-A-A---A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665843 18 +   7040546 A----A---G-A-AC-AACTTC--AT---A-A-A---A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209503 18 +   1652518 A----A---G-A-AC-AACTTC--AT---A-A-A---A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505923 19 +  60362399 C----A---G-A-AC-AACTCC--AT---G-A-AA--A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9559 19 -     23171 C----A---G-A-AC-AACTCC--AT---G-A-AA--A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222902 19 +   9314153 C----A---G-A-AC-AACTCC--at---g-a-a--aa
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616037 19 +  59632846 C----A---G-A-AC-AACTCC--at---g-a-a--aa
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107618 19 -  63665305 C----A---G-A-AC-AACTCC--at---g-a-a--aa
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409621 18 -  46296322 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591895 18 +  44709034 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                     61 18 -      1607 G----A---G-C-TC-AGCTTC--AT---A-A-A---A
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271009 18 +    496798 a----a---g-a-aa-aacttC--AT---C-A-G---G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                814 19 +      9923 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28222  6 -     39886 --------------C-AA-CTT----------------
i Castor_canadensis.CasCan_scaffold_39952                I 2 I 3
s Catagonus_wagneri.CatWag_scaffold_2839                     80096 19 -    217609 A----A---G-A-AC-AGCTTC--AT---A-A-AA--A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996948 18 +  23392119 A----G---A-C-TC-AATTTc--tt---a-a-a---a
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000389 18 +  23407841 a----g---a-c-tc-aatttt--tt---a-a-a---a
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63470 18 -     66877 A----G---A-C-TC-AATTTT--TT---A-A-A---A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5622 18 -     12580 A----A---G-A-AT-AACTTC--AT---T-G-A---A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43679 18 +     53515 A----A---G-A-AT-AACTTC--AT---T-G-A---A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373442 18 -  26074798 A----A---G-A-AT-ACCTTC--AT---T-A-A---A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8496 18 -     34880 A----A---G-A-AT-ACCTTC--AT---T-A-A---A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67592 18 -     89041 A----A---G-A-AT-ACCTTC--AT---T-A-A---A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2969 18 -      5494 A----A---G-A-AA-AACTTC--AT---C-A-A---G
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492727 20 -  27778364 A----A---G-A-AC-AACTTC--AT---A-A-AAA-A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19560 20 +     27315 A----A---G-A-AC-AACTTC--AT---A-A-AAA-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141806 18 -   4669795 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45549 18 +     47900 A----A---G-A-AT-AACTTG--AC---T-A-A---A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            978 18 -     14410 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45362 18 -    148725 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27571 18 -     40656 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7535 18 +     20796 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12653 18 -     17524 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28376 18 -     34525 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12156 18 -     25376 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364743 18 -  39242232 A----A---G-A-AT-AACTTC--AC---T-A-A---A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270470 18 +  21565898 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32838 18 -     45857 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27739 18 -     32606 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3901 18 +      8499 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26297 18 +     70610 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23258 18 +     36323 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13238 18 -     19938 A----A---G-A-AC-AACTTC--AT---A-A-A---A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31171 19 -     33796 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5685 19 -     15404 A----A---G-A-AC-AACTTG--AC---AAA-A---G
i Cheirogaleus_medius.k141_759766                        I 2 C 0
s Cheracebus_lucifer.k141_2312002                             9497 18 -     32913 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19910 18 -     40346 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20165 18 +    216457 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19958 18 +     39636 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239301 21 -   2543920 G----A---A-C-TC-aatttc--atcata-a-a---a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4553 18 +      5346 C----A---G-A-AT-AACTTC--AT---T-C-A---G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43028 18 -    112038 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8584 13 +     34062 --------------T-AACTTC--AT---T-A-A---A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344159 18 +  18827391 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10703 18 -     44032 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305484 18 - 135778131 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15368 18 +     15858 A----A---G-A-AC-AACTTC--AT---A-A-A---A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606943 18 -    839153 a----a---g-a-ac-aacttc--at---a-a-a---a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2058 18 +      2406 A----A---G-A-AC-GACTTC--AT---A-A-A---A
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409889 18 -   2368649 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379770 18 - 200372422 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3327 18 -     84244 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807767 14 +  53390261 A----A---G-A-AC-AACTTT--AT------------
i Condylura_cristata.JH655891.1                          C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3322 19 -      8242 A----A---G-A-AC-AATTTC--AT---T-A-AA--A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44821 12 -     83289 -------------AC-AAATTC--AC---A-G------
i Cricetomys_gambianus.CriGam_scaffold_14425             I 3 I 1
s Cricetulus_griseus.LT883664.1                          213115401 14 - 224834208 ---------a-c-ac-aaagac--at---a-t------
i Cricetulus_griseus.LT883664.1                          I 1 I 1
s Crocidura_indochinensis.CroInd_scaffold_77846               9926  9 +     12657 ----------------AAATTA--AA---A--------
i Crocidura_indochinensis.CroInd_scaffold_77846          I 2 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4895 19 +     87169 A----A---G-A-AC-AACTCC--AT---A-A-AA--A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645948 19 -   1526836 A----A---A-CCAC-AGTTGT--GT---G-A-A---A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18850 18 +     50838 G----A---A-C-TC-AGTTTC--AT---A-A-A---A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4865 18 +     36344 G----A---A-C-TC-AATTTC--AT---A-A-A---A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28641 18 +     75252 G----A---A-C-TC-AATTTC--AT---A-A-A---A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110594 18 -   2246927 A----A---G-T-AC-AACTTC--AT---A-A-A---A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293107 19 +  12879189 A----A---G-A-AC-AACTTC--AC---AAA-A---A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632450 19 -  35494412 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              331009 19 -   2620052 A----A---G-A-AC-AACTTC--AT---A-A-GA--A
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665011 20 -   1390856 A----A---G-A-AC-AACTTC--AT---A-A-AAA-A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139804 20 -    198055 A----A---G-A-AC-AACTTC--AT---A-A-AAA-A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99389 18 -    115145 G----A---C-C-TC-AATTTC--AT---A-A-A---A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951033 18 -  37912305 A----G---A-A-AG-AAACTT--AT---A-A-A---A
i Dipodomys_ordii.KN672350.1                             C 0 I 77
s Dipodomys_stephensi.DipSte_scaffold_89095                   5959 18 -     10735 A----G---A-A-AG-AAACGT--AT---A-A-A---A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 77
s Echinops_telfairi.JH980293.1                            62856084 18 - 111700974 A----A---G-A-AC-AATTCT--AT---A-A-A---C
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6785 19 +     19438 a----a---g-a-ac-aacttt--ac---t-g-a--aa
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240262 18 -    607251 A----A---G-T-AC-AACTTC--AT---A-T-A---A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226284 18 +  10337057 A----A---G-A-TT-AACTCT--TT---A-G-A---A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31543 14 +    110024 ---------A-C-AA-AAATTC--AT---A-T------
i Ellobius_lutescens.LOEQ01008920.1                      I 3 I 1
s Ellobius_talpinus.LOJH01026522.1                           13514 14 +     18970 ---------A-C-AA-AAAtcc--at---a-t------
i Ellobius_talpinus.LOJH01026522.1                       I 3 I 1
s Enhydra_lutris.KZ291758.1                               24916650 13 +  41312741 ----------------AACTCC--AT---A-A-AA--A
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                             12579432 19 +  14770903 A----A---G-A-AT-GACTTC--AT---A-A-AA--A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041925 20 -   4378816 a----a---g-a-aC-AACTTC--AT---A-A-AAA-A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375863 20 +  39960074 A----A---G-A-AC-AACTTC--AT---A-A-AAA-T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411770 20 -    498745 A----A---G-A-AC-AACTTC--AT---A-A-AAA-T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666583  9 +   7059049 ----------------aaagtc--at---a--------
i Erinaceus_europaeus.JH835339.1                         I 2 I 3
s Erythrocebus_patas.Contig38                               263695 18 +  21539334 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71656 19 -    133382 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_705718              232 19 +       377 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Eubalaena_japonica.EubJap_flattened_line_705718        C 0 C 0
s Eulemur_albifrons.k141_51491                               15316 19 -     24895 A----A---G-A-AC-GACTTG--AC---AAA-A---A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43026 19 -     70999 A----A---G-A-AC-GACTTG--AC---AAA-A---A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              86996 19 +    112731 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43559 19 +     68309 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53883 19 -     65740 A----A---G-A-AC-GACTTG--AC---AAA-A---A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24515 19 -     75513 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48710 19 -     97555 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5434 19 +     30972 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43154 19 -     52037 A----A---G-A-AC-GACTTG--AC---AAA-A---A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59557 19 -    111500 A----A---G-A-AC-GACTTG--AC---AAA-A---A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247351 19 - 206538554 A----A---G-A-AC-AACTGC--AT---T-A-GA--A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117137 19 - 205367284 A----A---G-A-AC-AACTGC--AT---T-A-GA--A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28234 19 -     30238 A----A---G-A-AC-AACTCC--AT---T-A-GA--A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916946 18 -   3816255 G----A---A-C-TC-AATTTC--AT---A-A-A---A
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126166 18 -    137831 A----A---G-A-CC-AGCTTA--AA---A-A-A---A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9711 18 +     22493 A----A---G-A-CC-AGCTTA--AA---A-A-A---A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21781 18 -     32986 A----A---G-A-CC-AGCTTA--AA---A-A-A---A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1683 18 -     28519 A----A---G-A-AC-AACTTC--AT---A-A-A---A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91965 18 -     95226 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            35010  5 -     36801 -------------------TTC--AT------------
i Glis_glis.GliGli_scaffold_33859                        C 0 I 2
s Gorilla_beringei.k141_3358147                               6312 18 -      8343 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255327 18 - 186649187 A----A---G-A-AT-AACTTC--AC---T-A-A---A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2492  5 -     78134 -------------------TTC--AT------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Hapalemur_alaotrensis.k141_330369                          15241 19 -     40692 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36643 19 +     49394 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61511 19 -     66874 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10385 19 -     42923 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17384 19 -     53142 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31327 19 -    327341 a----a---g-a-ac-aagtcc--at---a-a-a--aa
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9639 18 +     48891 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932923 18 -  22651954 G----A---A-C-TC-AGTTTC--AT---A-A-A---A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                4036 18 +      4291 A----A---G-G-AC-AGTGCC--CT---A-A-A---A
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8151 19 -     36432 A----A---G-C-AC-AACTTC--AT---A-A-AA--A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552143 19 -   1711038 a----a---a-a-gc-aatttc--at---t-a-a--aa
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1581 19 -      2730 A----A---A-A-GC-AATTTC--AT---T-A-AA--A
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143336 18 -    630532 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70492 19 +     83186 A----A---G-A-AT-ACCTCC--AT---G-A-AA--A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72385 18 +    143317 G----G---A-C-TC-AATTTC--AT---A-A-A---A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6370 18 +     12352 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13554 18 +     55766 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053154 18 + 191637585 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802032 18 +  11177569 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7670 19 -    135385 G----A---A-C-TC-TATTTC--AT---A-A-AA--A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387384 12 +   7955117 --------------C-AACTTC--AT---A-A-A----
i Ictidomys_tridecemlineatus.JH393364.1                  I 6 C 0
s Indri_indri.k141_2415743                                    2941 19 +     11955 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10551 19 -     16823 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240371 17 +   9596543 -----C---A-T-AG-AAATTC--AT---A-T-A---A
i Jaculus_jaculus.JH725527.1                             I 2 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72391 19 -     97402 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43774 16 +    110728 A----A---G-A-AT-AAC--C--AT---T-A-A---A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63404 19 -     65777 a----a---g-a-at-gacttc--ag---a-a-a--aa
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760034 19 +  30322482 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4677 18 -     13097 C----A---G-A-AT-AACTTC--AT---T-C-A---A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4431 18 +      5940 C----A---G-A-AT-AACTTC--AT---T-C-A---A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4254 18 -      5717 C----A---G-A-AT-AACTTC--AT---T-C-A---A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10644 18 -     11567 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12025 18 -     12945 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9547 18 +     29618 A----A---G-A-AC-AACTTG--AC---A-A-A---A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9543 18 +     31569 A----A---G-A-AC-AACTTG--AC---A-A-A---A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9553 18 +     24756 A----A---G-A-AC-AACTTG--AC---A-A-A---A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9553 18 +     16388 A----A---G-A-AC-AACTTG--AC---A-A-A---A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814032 13 -   3914936 ----------------AACTCC--AT---A-A-AA--G
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18395 18 +     24238 A----A---G-A-AC-AACTTC--GT---A-ACA----
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341736 19 +    662738 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334691 18 -   1826925 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11863 19 +     19643 A----A---G-A-CC-AAGTTCA-AA---A-A-A---A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045533 19 -   6120653 A----A---G-A-CC-AAGTTCA-AA---A-A-A---A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39084721 18 +  43346337 a----a---g-g-ac-aactcc--gt---a-a-a---a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615192 19 +  59628241 C----A---G-A-AC-AACTCC--at---g-a-a--aa
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46080 18 -     61512 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373742 18 -  60120075 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26010 18 +     30207 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             848 18 -      5035 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25963 18 +     30527 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37139 18 -     50087 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46883 18 +     51645 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416086 18 - 187317192 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400316 18 +  25927173 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49488 18 -     62418 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2019 18 +     14901 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45960 18 +     59329 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271868 18 +    668171 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   506 18 -      5049 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3666 18 +     17132 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223752 19 -    270270 A----A---G-A-AC-AACTTT--AT---T-G-AA--A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323156 18 +  24302211 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               357987 18 -    752769 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674080 18 -    737560 -----a---a-a-ac-AACTTC--AG---A-A-AA--A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221376 18 +    317179 -----a---a-a-ac-AACTTC--AG---A-A-AA--A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501602 12 +  40650429 --------------c-aacttC--AT---A-A-A----
i Marmota_marmota.CZRN01000018.1                         I 6 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150921 19 +    207569 A----A---G-A-AC-AGTTTC--AT---T-A-AA--A
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26749 13 -     74585 ----------------AACTCC--AT---A-A-AA--A
i Mellivora_capensis.MelCap_flattened_line_19308         I 3 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50722 14 -    140813 ---------A-C-AC-AAATTC--AC---A-T------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 3 I 1
s Mesocricetus_auratus.KB708134.1                         17429781 14 +  29670104 ---------A-C-AT-AAAGTC--GT---A-T------
i Mesocricetus_auratus.KB708134.1                        I 3 I 1
s Mesoplodon_bidens.MesBid_scaffold_6114                     88020 19 +     93471 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10811 18 +     17804 A----A---G-A-AT-AACTTC--AT---T-G-A---A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11311 18 -     12984 A----A---G-A-AT-AACTTC--AT---T-G-A---A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19627 18 -     26561 A----A---G-A-AT-AACTTC--AT---T-G-A---A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985384 19 +  93316391 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47319 18 +    145209 A----A---G-A-CC-CACTCT--AG---A-A-A---C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185611 19 +    200668 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15962988 14 +  27267610 ---------A-C-AA-AAAttc--at---a-t------
i Microtus_ochrogaster.CM001695.1                        I 3 I 1
s Miniopterus_natalensis.LDJU01000034.1                    6363767 19 -   8254450 a----a---g-a-ac-agcttc--gt---a-a-a--aa
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42674 19 -     48117 a----a---g-a-ac-agcttc--gt---a-a-a--aa
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23190 18 -     27822 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9043 13 +     27589 ----------------AACTCC--AT---A-A-AA--G
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 3 C 0
s Mirza_zaza.k141_766280                                     53167 19 -     62432 A----A---G-A-AT-AGCTTG--AC---AAA-A---A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360125 19 +    437263 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179843 19 +    366855 a----a---g-a-ac-aactta--at---a-a-a--aA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26087 18 -     82753 A----A---G-A-AC-AATTTC--AT---A-T-A---A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19052 19 -     63510 A----A---G-A-AC-AACTCC--AT---A-A-AA--A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39736 19 +     47283 A----A---G-A-AC-TACTTC--AT---A-A-AA--A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593700 14 + 120012414 ---------A-C-AT-AAATTC--AC---A-T------
i Mus_caroli.LT608237.1                                  I 3 I 1
s Mus_musculus.chr8                                       41688089 14 + 129401213 ---------A-C-AT-AAGTTC--AT---G-T------
i Mus_musculus.chr8                                      I 3 I 1
s Mus_spretus.CM004101.1                                  39497383 14 + 130317789 ---------A-C-AT-AAATTC--AC---A-T------
i Mus_spretus.CM004101.1                                 I 3 I 1
s Muscardinus_avellanarius.MusAve_scaffold_12866             84048  5 -     86153 -------------------TTC--AT------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 2
s Mustela_putorius.JH418006.1                             14355671 13 +  14710649 ----------------AACTCC--AT---A-A-AA--A
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63633 18 +     67721 G----A---A-C-TC-AGTTTC--AT---A-A-A---A
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9793991 19 +  10118263 A----A---G-A-AC-GACTTC--AT---A-A-AA--A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388164 19 +   6019432 A----A---G-A-AC-GACTTC--AT---A-A-AA--A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383952 19 +   4330536 A----A---G-A-AC-GACTTC--AT---A-A-AA--A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2761 19 +     18357 A----A---G-A-GC-GACTTC--AT---A-A-AA--A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120340 18 +    130748 A----A---G-A-GA-AACTTC--AT---A-A-G---T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946854 18 +   3037898 -----c---a-c-ac-aaattc--ac---a-tac---A
i Nannospalax_galili.KL204047.1                          I 4 C 0
s Nasalis_larvatus.k141_1350636                              29846 18 +     34575 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232801 19 -   7148211 A----A---G-A-AC-AACTGC--AT---A-A-AA--A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128808 19 -    149072 G----A---A-A-AA-ACCTTC--AT---T-A-AA--A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54262 18 -    132029 A----A---G-A-AT-AACTTT--AC---A-A-A---A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10357 18 -     16345 A----A---G-A-AT-AACTTT--AC---A-A-A---A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16242 18 +     22201 A----A---G-A-AT-AACTTT--AC---A-A-A---A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414463 18 -  22158432 A----A---G-A-AT-AACTTT--AC---A-A-A---A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26640 18 -     54323 A----A---G-A-AT-AACTTT--AC---A-A-A---A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198788 19 +   9404916 C----A---G-A-AT-AACTgc--at---a-a-a--aa
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638763 16 + 196305487 A----A---G-A-CC-AAGTTAA-AA---A--------
i Nycticebus_bengalensis.LG01                            C 0 I 2
s Nycticebus_coucang.k141_1296080                             1366 16 -      9413 A----A---G-A-CC-AAGTTAA-AA---A--------
i Nycticebus_coucang.k141_1296080                        C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566143 19 - 199412804 A----ATTTG-A-CC-AAGTTCA-AA---A--------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 2
s Ochotona_princeps.JH802162.1                             2557454 17 -   3988456 A----A---A-A-AC-AACTTC--AT---A-G-A----
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055589 18 -  11899542 a----a---a-c-tC-AGTTTC--AT---A-A-A---A
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452249 13 +   2017862 ----------------GACTCc--at---a-a-a--aa
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Odocoileus_virginianus.KZ100018.1                         436855 18 -    630418 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15049 18 +    150152 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93340 14 -    140218 ---------A-C-AA-AAATTC--AT---A-T------
i Ondatra_zibethicus.OndZib_scaffold_7387                I 3 I 1
s Onychomys_torridus.OnyTor_scaffold_28377                    4209 14 -     41509 ---------A-C-AC-AATTTC--AT---A-T------
i Onychomys_torridus.OnyTor_scaffold_28377               I 3 I 1
s Orcinus_orca.KB316932.1                                  8103193 19 +  10937097 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                239 18 +     11607 A----A---G-A-AC-AACTTC--AT---A-A-A---A
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104189 18 - 174332312 A----A---G-A-AC-AACTTC--GT---A-ACA----
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39833 19 +    559221 C----A---G-A-AC-AACTcc--at---a-a-a--aa
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41312 20 -     51505 A----A---G-A-CC-AGCTTAA-AA---AAA-A---A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354316 19 +   1103335 A----A---g-a-cc-agctta-aaa---a-a-a---a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404759 18 -  44047080 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5278 18 +     17875 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473356 18 - 189151597 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25057 19 -    230217 A----A---G-A-AC-AACTCC--AT---T-A-GA--A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462383 19 -  18783137 A----A---G-A-AC-AACTCC--AT---T-A-GA--A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973042 19 +   8748460 A----A---G-A-AC-AACTCC--AT---T-A-GA--A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616287 18 +   2937107 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   243988 18 - 183742232 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10450 18 +     21308 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293023 18 -  20919399 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23098 18 -     27687 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16244 18 +     16796 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23055 18 -     23640 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15655 19 +     78924 A----A---G-A-AC-AAGTCC--AT---T-A-AA--A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27642 17 +     31479 A----A---G-A-CC-AACTTCAAAA---A--------
i Perodicticus_ibeanus.k141_1921260                      C 0 I 2
s Perodicticus_potto.k141_1854441                            20011 16 -     24908 A----A---G-A-CC-AACTTCA-AA---A--------
i Perodicticus_potto.k141_1854441                        C 0 I 2
s Perognathus_longimembris.PerPac_flattened_line_89005        2386 16 +      9367 A----G---A-A-AG-AAACAT--GT---A-A------
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 84
s Peromyscus_maniculatus.KI615324.1                         247419 14 +  18517816 ---------A-C-AC-AATTTC--AT---A-T------
i Peromyscus_maniculatus.KI615324.1                      I 3 I 1
s Petromus_typicus.PetTyp_scaffold_17301                     32511 18 -     56120 T----A---A-T-TC-AATTTC--AT---A-A-A---A
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4719 19 -     63832 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3277 18 +     55023 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2815 18 -     89929 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3405 18 +     40849 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255079 19 +  14605196 A----A---G-A-AT-AACTTT-TAC---T-A-A---A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4581 19 +     22231 A----A---G-A-AC-GGCTTC--AT---A-A-GA--A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65395 18 +    207309 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6487 18 -     25401 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32231 18 +     58159 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32507 18 +     63561 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32267 18 +     51148 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557237 18 -   4542175 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32251 18 +     51125 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1736 19 +     19503 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8662 18 +     39866 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3744 18 -      9282 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43148 18 -     87950 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43544 18 -     88961 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8240 18 -     39403 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43191 18 +     87928 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8239 18 -     60166 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15176 18 -     67232 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43092 18 -     90634 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44559 18 +     89403 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178465 18 - 189387572 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193282 18 -   9816681 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28426 18 +     69807 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45607 18 -     80239 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 3938 18 +      7663 A----A---G-G-AC-AGTGCC--CT---A-A-A---A
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983182 19 +   4620579 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566692 19 -   2598838 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4330 19 -      7103 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4927 19 -     11706 A----A---G-A-AC-AACCTG--AC---AAA-A---A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8665 19 -     30655 A----A---G-A-AC-GACTTG--AC---AAA-A---A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34978 19 +     46564 A----A---G-A-AC-GACTTG--AC---AAA-A---A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95257 19 -     98465 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8896 19 +     35169 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38021 14 +     52041 ---------A-C-AC-AAACTC--AC---A-T------
i Psammomys_obesus.NESX01036366.1                        I 3 I 1
s Pteronotus_parnellii.KE847780.1                            52736 19 -     66298 a----a---G-A-AT-AGCTTC--AT---A-A-GA--A
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5245 13 -     18639 ----------------AACTCC--AT---A-A-AA--A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 3 C 0
s Pteropus_alecto.KB030862.1                               5841325 19 -  28871421 A----A---G-A-AC-AACTTT--AT---T-G-AA--A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537840 19 -   4952924 A----A---G-A-AC-AACTTT--AT---T-G-AA--A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099700 19 +  38429054 A----A---G-A-AC-AACTCC--AT---T-A-GA--A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27795 18 +     91421 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154279 18 -   7812017 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8652 18 +     72585 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53772 18 +     55069 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023305 14 -  90668790 ---------A-C-AT-AAATTC--AC---A-T------
i Rattus_norvegicus.chr16                                I 3 I 1
s Rhinolophus_sinicus.LVEH01000134.1                       2915305 19 +   3329780 a----a---g-a-ac-aatttc--at---t-a-a--aa
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2380 18 +      7119 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104122996 18 + 195417433 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237222 18 -   7961872 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75824 19 -    116970 A----T---G-A-AC-AACTTT--AT---T-G-AA--A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 420 C 0
s Saguinus_bicolor.k141_1429097                               4551 18 +     27962 C----A---G-A-AT-AACTTC--AT---T-C-A---G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4445 18 +      6077 C----A---G-A-AT-AACTTC--AT---T-C-A---G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4535 18 +      5971 C----A---G-A-AT-AACTTC--AT---T-C-A---G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4456 18 +      5932 C----A---G-A-AT-AACTTC--AT---T-C-A---G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2798 18 -      4390 C----A---G-A-AT-AACTTC--AT---T-C-A---G
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392235 18 - 209938924 C----A---G-A-AT-AACTTC--AT---T-C-A---G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4404 18 +      5979 C----A---G-A-AT-AACTTC--AT---T-C-A---G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                974 18 -     22275 C----A---G-A-AT-AACTTC--AT---T-C-A---G
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8447 18 +     16473 A----A---G-A-AC-AACTTC--AT---A-T-A---A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109571 18 + 121099817 T----A---G-A-AT-AACTTC--AT---T-A-A---A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31138 18 -     47369 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31524 18 -     79414 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28215 18 -     34454 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15616 18 -     22428 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30770 18 -     47109 A----A---G-A-AT-AACTTC--AT---T-A-A---A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238816 18 +   5703754 A----A---G-A-AT-AGCTTC--AT---T-A-A---A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8406 18 +     21866 A----A---G-A-AT-AGCTTC--AT---T-A-A---A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116471 14 +    313613 A----A---G-A-AC-AACTTT--AT------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 2
s Semnopithecus_entellus.k141_158471                         26121 18 +     27374 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29633 18 +     58920 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16131 18 -     45317 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23789 18 -     42441 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26467 18 -     29113 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29542 18 -     48123 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49800 14 +     77746 ---------A-C-AC-AAATTC--TT---A-T------
i Sigmodon_hispidus.SigHis_scaffold_20193                I 3 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126            1864743 17 -   1910179 ---------G-A-AC-AACTTC--AT---T-A-AA--A
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 C 0
s Sorex_araneus.JH798187.1                                 4671859  9 +  18376816 ----------------aacttc--aa---a--------
i Sorex_araneus.JH798187.1                               I 1 I 3
s Spermophilus_dauricus.KZ294078.1                         1868962 12 +   3870691 --------------C-AACTTC--AT---A-A-A----
i Spermophilus_dauricus.KZ294078.1                       I 6 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7335 13 -     97271 ----------------AACTCC--AC---A-A-AA--A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125468 19 +    196729 A----A---G-A-AC-AACTCC--AT---A-A-AA--A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644353 19 +  69701581 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391722 18 +   1523678 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14902 19 +     22964 a----a---g-a-ac-aacttc--at---t-a-a--aa
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3331 18 +      5583 A----A---G-A-AA-AACTTC--AT---A-A-G---T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192203 21 +    199430 A----A---G-A-AC-AACTTC--AT---A-A-AAAAA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106173 21 -    539355 A----A---G-A-AC-AACTTC--AT---A-A-AAAAA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1241 18 +      9917 A----G---G-A-AA-AACTTC--AT---C-A-A---G
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8039 18 +     20590 A----G---G-A-AA-AACTTC--AT---C-A-A---G
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353974 18 - 186847797 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24667 18 -     33621 T----A---A-C-TC-CATTTC--AT---A-A-A---A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20317 18 -     31044 A----A---G-A-AC-AACTTC--AT---A-A-A---A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480729 19 -    610378 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21666 18 +     26378 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34342 18 -     78344 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       20991 18 +     25722 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29298 18 -     62838 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29342 18 +     46913 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10151 18 -     28527 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31233 18 -     64340 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29271 18 -     63452 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10718 18 +     22490 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4141 18 -      6147 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11054 18 -     13050 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256284 18 -   6242583 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2312 18 +     19340 A----A---G-A-AT-AACTTT--AC---T-A-A---A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174060 19 -    200418 A----A---G-A-ACTAAATTC--AT---G-T-A---A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6481487 18 -  10818551 A----A---G-A-AC-GACTCC--AT---A-A-A---A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834976 13 -   4065304 A----T---G-A-AC-AAGTTC--T-------------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       8996 13 -     70247 A----A---G-A-AC-AAGTTC--T-------------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366306 19 -  33153633 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Ursus_maritimus.KK499267.1                                182647  1 +   5085361 -------------------------------------a
i Ursus_maritimus.KK499267.1                             I 286 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4198 14 -     21056 A----A---G-A-AT-AACTCT--AT------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 2
s Varecia_rubra.k141_787544                                  25834 19 -     30710 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24741 19 -    147434 A----A---G-A-AC-AACTTG--AC---AAA-A---A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76888 18 +   5488506 A----A---G-A-AC-AACTTC--AT---A-A-A---A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105554 19 -    112863 C----A---G-A-AC-AACTCC--AT---A-A-AA--A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174754 12 -    224448 --------------C-AACTTC--AT---A-A-A----
i Xerus_inauris.XerIna_scaffold_2302                     I 6 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29457 13 -     86975 ----------------aactcc--at---a-a-a--aa
i Zalophus_californianus.ZalCal_flattened_line_17732     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       557 17 -      1899 -----C---A-C-AC-AAATTT--AT---A-T-T---A
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 2 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1590 19 +      2126 A----A---G-A-AC-AACTTC--AT---A-A-AA--A
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6030 3 +     36723 AA-G
s Acinonyx_jubatus.LLWD01001279.1                           813461 2 +   1699592 A--G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25701 3 +     63021 AA-A
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 1 C 0
s Ailurus_fulgens.LNAC01001112.1                            216257 2 +    347723 t--g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18609 2 -     61208 -A-G
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48675 3 +     53615 AA-G
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           706 3 +     13857 AA-G
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17257 3 -     21945 AA-G
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18942 3 +     32033 AA-G
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72776 3 -     84148 AG-G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45015 3 -     78289 AG-G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44454 3 +     55831 AG-G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42904 3 -     64179 AG-G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24538 3 -     24835 AG-G
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41529 3 +     45454 AG-G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47178 3 +     70886 AG-G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9351 3 +     30854 AG-G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33485 3 +     42133 AG-G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585910 2 +   2318259 A--G
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177711 2 -    412891 A--G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51017 2 -     68529 A--G
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1742 3 +     17741 AG-G
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2367 3 -     15923 AG-G
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672649 3 +   5030052 AG-G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2643 3 -     16391 AG-G
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2202 3 -     17186 AG-G
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16721 3 -     32367 AC-A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20816 3 -     45910 AA-T
i Arctocebus_calabarensis.k141_1364444                   I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5977 2 -     15198 A--G
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275239 3 +  21539123 AG-G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11407 3 +     48076 AG-G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6542 3 -     28759 AG-G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34096 3 +     44353 AG-G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49467 3 -     71267 AG-G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23525 3 -     33135 AG-G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6816 3 +     11645 AA-G
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6824 3 -     19611 AA-G
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964061 2 -  23207421 A--G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          561 2 -     25979 A--G
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86918 2 +    124022 A--G
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22460 2 +    288883 A--G
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356850 2 +  48749331 A--G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755414 2 +   1948126 A--G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545556 2 -  45695690 A--G
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530571 2 -   4408762 A--G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8415 3 +     28062 AG-G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43709 3 -     91139 AG-G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21235 3 +     95584 AG-G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21148 3 +    119600 AG-G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10722 3 +     18648 AG-G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10257 3 -     13885 AG-G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2327 3 -      8861 AG-G
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454719 3 + 189096842 AG-G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2242 3 +      8664 AG-G
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631575 2 +  17673402 A--G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665861 2 +   7040546 A--G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209521 2 +   1652518 A--G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505942 2 +  60362399 A--G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9578 2 -     23171 A--G
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222921 2 +   9314153 a--g
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616056 2 +  59632846 a--g
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107637 2 -  63665305 a--g
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409639 2 -  46296322 A--G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591913 2 +  44709034 A--G
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                     79 3 -      1607 AG-G
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271027 3 +    496798 AA-G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                833 2 +      9923 A--G
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28231 3 -     39886 AA-G
i Castor_canadensis.CasCan_scaffold_39952                I 3 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80115 2 -    217609 A--G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996966 3 +  23392119 ag-a
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000407 3 +  23407841 ag-a
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63488 3 -     66877 AG-A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5640 3 -     12580 AG-G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43697 3 +     53515 AG-G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373460 3 -  26074798 AG-G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8514 3 -     34880 AG-G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67610 3 -     89041 AG-G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2987 3 -      5494 AA-G
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492747 2 -  27778364 C--G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19580 2 +     27315 C--G
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141824 3 -   4669795 AA-G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45567 3 +     47900 AA-G
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            996 3 -     14410 AA-G
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45380 3 -    148725 AA-G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27589 3 -     40656 AA-G
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7553 3 +     20796 AA-G
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12671 3 -     17524 AA-G
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28394 3 -     34525 AA-G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12174 3 -     25376 AA-G
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364761 3 -  39242232 AA-G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270488 3 +  21565898 AA-G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32856 3 -     45857 AA-G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27757 3 -     32606 AA-G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3919 3 +      8499 AA-G
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26315 3 +     70610 AA-G
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23276 3 +     36323 AA-G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13256 2 -     19938 A--G
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31190 3 -     33796 AA-G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5704 3 -     15404 AA-G
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9515 3 -     32913 AG-G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19928 3 -     40346 AG-G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20183 3 +    216457 AG-G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19976 3 +     39636 AG-G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239322 3 -   2543920 at-g
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4571 3 +      5346 AG-G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43046 3 -    112038 AG-G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8597 3 +     34062 AG-G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344177 3 +  18827391 AA-G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10721 3 -     44032 AA-G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305502 3 - 135778131 AA-G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15386 3 +     15858 AA-G
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606961 3 -    839153 aa-g
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2076 3 +      2406 AT-A
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409907 3 -   2368649 AA-G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379788 3 - 200372422 AA-G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3345 3 -     84244 AA-G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807783 2 +  53390261 A--G
i Condylura_cristata.JH655891.1                          I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3341 2 -      8242 T--A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44834 3 -     83289 AA-G
i Cricetomys_gambianus.CriGam_scaffold_14425             I 1 C 0
s Cricetulus_griseus.LT883664.1                          213115416 3 - 224834208 aa-G
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9938 2 +     12657 A--G
i Crocidura_indochinensis.CroInd_scaffold_77846          I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4914 2 +     87169 A--G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645967 3 -   1526836 AG-G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18868 3 +     50838 AG-G
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4883 3 +     36344 AG-G
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28659 3 +     75252 AG-G
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110612 2 -   2246927 A--G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293126 3 +  12879189 AA-T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632469 2 -  35494412 A--A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              331028 2 -   2620052 A--G
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665031 2 -   1390856 A--G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139824 2 -    198055 A--G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99407 3 -    115145 AG-G
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951128 3 -  37912305 TA-G
i Dipodomys_ordii.KN672350.1                             I 77 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6054 3 -     10735 TA-G
i Dipodomys_stephensi.DipSte_scaffold_89095              I 77 C 0
s Echinops_telfairi.JH980293.1                            62856102 3 - 111700974 AT-G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6804 2 +     19438 c--a
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240280 2 -    607251 A--G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226302 3 +  10337057 AT-T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31558 3 +    110024 AA-G
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01026522.1                           13529 3 +     18970 aa-g
i Ellobius_talpinus.LOJH01026522.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               24916663 2 +  41312741 T--G
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579451 2 +  14770903 C--A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041945 2 -   4378816 A--G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375883 2 +  39960074 A--G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411790 2 -    498745 A--G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666595 2 +   7059049 t--g
i Erinaceus_europaeus.JH835339.1                         I 3 C 0
s Erythrocebus_patas.Contig38                               263713 3 +  21539334 AA-G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71675 2 -    133382 T--G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_705718              251 2 +       377 A--G
i Eubalaena_japonica.EubJap_flattened_line_705718        C 0 C 0
s Eulemur_albifrons.k141_51491                               15335 3 -     24895 AA-G
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43045 3 -     70999 AA-G
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87015 3 +    112731 AA-G
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43578 2 +     68309 -A-G
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53902 3 -     65740 AA-G
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24534 3 -     75513 AA-G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48729 3 -     97555 AA-G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5453 3 +     30972 AA-G
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43173 3 -     52037 AA-G
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59576 3 -    111500 AA-G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247370 2 - 206538554 A--G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117156 2 - 205367284 A--G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28253 2 -     30238 A--G
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916964 3 -   3816255 AG-G
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126184 3 -    137831 AA-T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9729 3 +     22493 AA-T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21799 3 -     32986 AA-T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1701 3 -     28519 AA-G
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91983 2 -     95226 A--G
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            35017 3 -     36801 AT-G
i Glis_glis.GliGli_scaffold_33859                        I 2 C 0
s Gorilla_beringei.k141_3358147                               6330 3 -      8343 AA-A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255345 3 - 186649187 AA-G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2499 3 -     78134 AT-G
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Hapalemur_alaotrensis.k141_330369                          15260 3 -     40692 AA-G
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36662 3 +     49394 AA-G
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61530 3 -     66874 AA-G
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10404 3 -     42923 AA-G
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17403 3 -     53142 AA-G
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31346 2 -    327341 a--g
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9657 2 +     48891 A--G
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932941 3 -  22651954 AG-G
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                4054 3 +      4291 AT-G
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8170 2 -     36432 A--G
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552162 2 -   1711038 c--a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1600 2 -      2730 C--A
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143354 3 -    630532 AA-G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70511 2 +     83186 A--G
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72403 3 +    143317 AG-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6388 3 +     12352 AA-G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13572 3 +     55766 AA-G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053172 3 + 191637585 AA-G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802050 3 +  11177569 AA-G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7689 3 -    135385 AG-A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387396 3 +   7955117 AT-C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2960 3 +     11955 AA-G
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10570 2 -     16823 A--G
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240388 2 +   9596543 -A-G
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72410 2 -     97402 A--G
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43790 3 +    110728 AG-G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63423 2 -     65777 c--a
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760053 3 +  30322482 AA-G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4695 3 -     13097 AG-G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4449 3 +      5940 AG-G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4272 3 -      5717 AG-G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10662 3 -     11567 AG-G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12043 3 -     12945 AG-G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9565 3 +     29618 AC-G
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9561 3 +     31569 AC-G
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9571 3 +     24756 AC-G
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9571 3 +     16388 AC-G
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814045 2 -   3914936 T--C
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18413 3 +     24238 AA-G
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341755 2 +    662738 A--G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334709 3 -   1826925 AA-G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11882 3 +     19643 AA-A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045552 3 -   6120653 AA-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39084739 3 +  43346337 at-g
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615211 2 +  59628241 a--g
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46098 3 -     61512 AA-G
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373760 3 -  60120075 AA-G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26028 3 +     30207 AA-G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             866 3 -      5035 AA-G
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25981 3 +     30527 AA-G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37157 3 -     50087 AA-G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46901 3 +     51645 AA-G
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416104 3 - 187317192 AA-G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400334 3 +  25927173 AA-G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49506 3 -     62418 AA-G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2037 3 +     14901 AA-G
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45978 3 +     59329 AA-G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271886 3 +    668171 AA-G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   524 3 -      5049 AA-G
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3684 3 +     17132 AA-G
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223771 2 -    270270 C--A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323174 3 +  24302211 AA-G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358005 3 -    752769 AA-G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674098 2 -    737560 A--G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221394 2 +    317179 A--G
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501614 3 +  40650429 AC-C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150940 2 +    207569 C--A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26762 2 -     74585 T--G
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50737 3 -    140813 AA-T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 C 0
s Mesocricetus_auratus.KB708134.1                         17429796 3 +  29670104 AA-G
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88039 2 +     93471 A--G
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10829 3 +     17804 AG-G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11329 3 -     12984 AG-G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19645 3 -     26561 AG-G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985403 3 +  93316391 AT-G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47337 3 +    145209 AG-G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185630 2 +    200668 A--G
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963003 3 +  27267610 aa-g
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363786 2 -   8254450 a--g
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42693 2 -     48117 a--g
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23208 3 -     27822 AA-G
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9056 2 +     27589 T--C
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53186 3 -     62432 AA-G
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360144 2 +    437263 A--A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179862 2 +    366855 A--G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26105 2 -     82753 A--G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19071 2 -     63510 A--G
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39755 1 +     47283 ---A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593715 3 + 120012414 AG-A
i Mus_caroli.LT608237.1                                  I 1 C 0
s Mus_musculus.chr8                                       41688104 3 + 129401213 AG-A
i Mus_musculus.chr8                                      I 1 C 0
s Mus_spretus.CM004101.1                                  39497398 3 + 130317789 AG-A
i Mus_spretus.CM004101.1                                 I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84055 3 -     86153 AT-G
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 2 C 0
s Mustela_putorius.JH418006.1                             14355684 2 +  14710649 G--G
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63651 3 +     67721 AG-G
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794010 2 +  10118263 C--A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388183 2 +   6019432 C--A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383971 2 +   4330536 C--A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         2780 2 +     18357 C--A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 224
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120358 3 +    130748 AC-G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946872 3 +   3037898 AA-G
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29864 3 +     34575 AA-G
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232820 2 -   7148211 A--A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128827 2 -    149072 A--G
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54280 3 -    132029 AA-G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10375 3 -     16345 AA-G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16260 3 +     22201 AA-G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414481 3 -  22158432 AA-G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26658 3 -     54323 AA-G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198807 2 +   9404916 a--g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638781 3 + 196305487 AA-A
i Nycticebus_bengalensis.LG01                            I 2 C 0
s Nycticebus_coucang.k141_1296080                             1384 3 -      9413 AA-A
i Nycticebus_coucang.k141_1296080                        I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566164 3 - 199412804 AA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 2 C 0
s Ochotona_princeps.JH802162.1                             2557471 3 -   3988456 AA-A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055607 3 -  11899542 AG-G
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452262 2 +   2017862 t--g
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436873 2 -    630418 A--G
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15067 2 +    150152 A--G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93355 3 -    140218 AA-G
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4224 3 -     41509 AA-G
i Onychomys_torridus.OnyTor_scaffold_28377               I 1 C 0
s Orcinus_orca.KB316932.1                                  8103212 2 +  10937097 A--A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                257 3 +     11607 AT-T
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104207 3 - 174332312 AA-G
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39852 2 +    559221 a--g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41332 3 -     51505 AA-A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354335 3 +   1103335 aa-a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404777 2 -  44047080 A--G
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5296 2 +     17875 A--G
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473374 3 - 189151597 AA-G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25076 2 -    230217 A--G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462402 2 -  18783137 A--G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973061 2 +   8748460 A--G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616305 2 +   2937107 A--G
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244006 3 - 183742232 AA-G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10468 3 +     21308 AA-G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293041 3 -  20919399 AA-G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23116 3 -     27687 AA-G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16262 3 +     16796 AA-G
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23073 3 -     23640 AA-G
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15674 2 +     78924 A--G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27661 3 +     31479 AA-A
i Perodicticus_ibeanus.k141_1921260                      I 2 I 1
s Perodicticus_potto.k141_1854441                            20029 3 -     24908 AA-A
i Perodicticus_potto.k141_1854441                        I 2 I 1
s Perognathus_longimembris.PerPac_flattened_line_89005        2486 3 +      9367 TA-G
i Perognathus_longimembris.PerPac_flattened_line_89005   I 84 C 0
s Peromyscus_maniculatus.KI615324.1                         247434 3 +  18517816 AA-G
i Peromyscus_maniculatus.KI615324.1                      I 1 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32529 1 -     56120 G---
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4738 2 -     63832 A--A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3295 3 +     55023 AA-G
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2833 3 -     89929 AA-G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3423 3 +     40849 AA-G
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255098 3 +  14605196 AA-G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4600 2 +     22231 C--A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65413 3 +    207309 AG-G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6505 3 -     25401 AG-G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32249 3 +     58159 AG-G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32525 3 +     63561 AG-G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32285 3 +     51148 AG-G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557255 3 -   4542175 AG-G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32269 3 +     51125 AG-G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1755 2 +     19503 A--G
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8680 3 +     39866 AG-G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3762 3 -      9282 AG-G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43166 3 -     87950 AG-G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43562 3 -     88961 AG-G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8258 3 -     39403 AG-G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43209 3 +     87928 AG-G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8257 3 -     60166 AG-G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15194 3 -     67232 AG-G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43110 3 -     90634 AG-G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44577 3 +     89403 AG-G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178483 4 - 189387572 AAAG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193300 4 -   9816681 AAAG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28444 3 +     69807 AA-G
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45625 3 -     80239 AA-G
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 3956 3 +      7663 AT-G
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983201 3 +   4620579 AA-G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566711 3 -   2598838 AA-G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4349 3 -      7103 AA-G
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4946 3 -     11706 AA-G
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8684 3 -     30655 AA-G
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          34997 3 +     46564 AA-G
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95276 3 -     98465 AA-G
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8915 3 +     35169 AA-G
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38036 3 +     52041 AA-A
i Psammomys_obesus.NESX01036366.1                        I 1 C 0
s Pteronotus_parnellii.KE847780.1                            52755 2 -     66298 A--G
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5258 2 -     18639 T--G
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841344 2 -  28871421 C--A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537859 2 -   4952924 C--A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099719 2 +  38429054 A--G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27813 3 +     91421 AA-G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154297 3 -   7812017 AA-G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8670 3 +     72585 AA-G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53790 2 +     55069 A--G
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023320 3 -  90668790 AA-A
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915324 2 +   3329780 c--a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2398 3 +      7119 AA-G
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123014 3 + 195417433 AA-G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237240 3 -   7961872 AA-G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75843 2 -    116970 C--A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4569 3 +     27962 AG-G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4463 3 +      6077 AG-G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4553 3 +      5971 AG-G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4474 3 +      5932 AG-G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2816 3 -      4390 AG-G
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392253 3 - 209938924 AG-G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4422 3 +      5979 AG-G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                992 3 -     22275 AG-G
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8465 2 +     16473 A--G
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109589 3 + 121099817 AG-G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31156 3 -     47369 AG-G
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31542 3 -     79414 AG-G
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28233 3 -     34454 AG-G
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15634 3 -     22428 AG-G
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30788 3 -     47109 AG-G
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238834 3 +   5703754 AG-G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8424 3 +     21866 AG-G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116487 2 +    313613 A--G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_158471                         26139 3 +     27374 AA-G
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29651 3 +     58920 AA-G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16149 3 -     45317 AA-G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23807 3 -     42441 AA-G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26485 3 -     29113 AA-G
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29560 3 -     48123 AA-G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49815 3 +     77746 AA-T
i Sigmodon_hispidus.SigHis_scaffold_20193                I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864760 2 -   1910179 A--T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671871 2 +  18376816 a--g
i Sorex_araneus.JH798187.1                               I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1868974 3 +   3870691 AT-C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7348 2 -     97271 T--G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125487 2 +    196729 A--G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644372 2 +  69701581 A--G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391740 3 +   1523678 AA-G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14921 2 +     22964 a--g
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3349 3 +      5583 AC-G
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192224 2 +    199430 A--G
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106194 2 -    539355 A--G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1259 3 +      9917 AA-G
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8057 3 +     20590 AA-G
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353992 3 - 186847797 AA-G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24685 3 -     33621 AG-G
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20335 2 -     31044 A--G
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480748 2 -    610378 A--G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21684 3 +     26378 AA-G
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34360 3 -     78344 AA-G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21009 3 +     25722 AA-G
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29316 3 -     62838 AA-G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29360 3 +     46913 AA-G
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10169 3 -     28527 AA-G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31251 3 -     64340 AA-G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29289 3 -     63452 AA-G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10736 3 +     22490 AA-G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4159 3 -      6147 AA-G
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11072 3 -     13050 AA-G
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256302 3 -   6242583 AA-G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2330 3 +     19340 AA-G
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174079 2 -    200418 A--G
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6481505 3 -  10818551 AT-G
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366325 2 -  33153633 A--A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4214 2 -     21056 A--G
i Uropsilus_gracilis.UroGra_scaffold_46687               I 2 C 0
s Ursus_maritimus.KK499267.1                                182648 2 +   5085361 t--g
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25853 3 -     30710 AA-G
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24760 3 -    147434 AA-G
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76906 2 +   5488506 A--G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105573 2 -    112863 A--G
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174766 3 -    224448 AC-A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29470 2 -     86975 t--g
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       574 2 -      1899 -A-G
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1609 2 +      2126 A--G
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Tupaia_tana.TupTan_flattened_line_394                       9009 0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1834989 0 -   4065304 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20415910 5 +  29979442 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6033 5 +     36723 CT-GAA
s Acinonyx_jubatus.LLWD01001279.1                           813463 5 +   1699592 TT-GAA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25704 5 +     63021 TT-GAA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415915 4 +  29979442 -t-gaa
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 5 C 0
s Ailurus_fulgens.LNAC01001112.1                            216259 5 +    347723 tt-aaa
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18611 5 -     61208 TT-GAG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48678 5 +     53615 CT-GAA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           709 5 +     13857 CT-GAA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17260 5 -     21945 CT-GAA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18945 5 +     32033 CT-GAA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72779 5 -     84148 TT-GAA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45018 5 -     78289 TT-GAA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44457 5 +     55831 TT-GAA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42907 5 -     64179 TT-GAA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24541 5 -     24835 TT-GAA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41532 5 +     45454 TT-GAA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47181 5 +     70886 TT-GAA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9354 5 +     30854 TT-GAA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33488 5 +     42133 TT-GAA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585912 5 +   2318259 TT-GAA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177713 5 -    412891 TT-GAC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51019 5 -     68529 TT-GAG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1745 5 +     17741 TT-GAA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2370 5 -     15923 TT-GAA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672652 5 +   5030052 TT-GAA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2646 5 -     16391 TT-GAA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2205 5 -     17186 TT-GAA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16724 5 -     32367 TG-GAA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20819 3 -     45910 ---AAT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5979 5 -     15198 TT-AAC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275242 5 +  21539123 TT-GAA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11410 5 +     48076 TT-GAA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6545 5 -     28759 TT-GAA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34099 5 +     44353 TT-GAA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49470 5 -     71267 TT-GAA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23528 5 -     33135 TT-GAA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6819 5 +     11645 TT-AAA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6827 5 -     19611 TT-AAA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964063 5 -  23207421 TT-GAG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          563 5 -     25979 TT-GAG
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86920 5 +    124022 TT-GAA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22462 5 +    288883 CT-GAG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356852 5 +  48749331 CT-GAG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755416 5 +   1948126 CT-GAG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545558 5 -  45695690 CT-GAG
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530573 5 -   4408762 CT-GAG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8418 5 +     28062 TT-GAA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43712 5 -     91139 TT-GAA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21238 5 +     95584 TT-GAA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21151 5 +    119600 TT-GAA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10725 5 +     18648 TT-GGA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10260 5 -     13885 TT-GGA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2330 5 -      8861 TT-GGA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454722 5 + 189096842 TT-GGA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2245 5 +      8664 TT-GGA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631577 5 +  17673402 TT-AAG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665863 5 +   7040546 TT-AAG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209523 5 +   1652518 TT-AAG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505944 5 +  60362399 TT-AAA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9580 5 -     23171 TT-AAA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222923 5 +   9314153 tt-aaa
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616058 5 +  59632846 tt-aaa
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107639 5 -  63665305 tt-aaa
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409641 5 -  46296322 TT-GAA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591915 5 +  44709034 TT-GAA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                     82 6 -      1607 TAAAAT
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271030 5 +    496798 TT-GAA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                835 5 +      9923 GT-GAC
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28234 5 -     39886 CT-GAA
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_2839                     80117 5 -    217609 TT-GAG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996969 5 +  23392119 tt-gaa
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000410 5 +  23407841 tt-gaa
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63491 5 -     66877 TT-GAA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5643 5 -     12580 TT-GGA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43700 5 +     53515 TT-GGA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373463 5 -  26074798 CT-GGA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8517 5 -     34880 CT-GGA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67613 5 -     89041 CT-GGA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2990 5 -      5494 TT-GAA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492749 5 -  27778364 TT-GAA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19582 5 +     27315 TT-GAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141827 5 -   4669795 CT-GAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45570 5 +     47900 CT-GAA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                            999 5 -     14410 CT-GAA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45383 5 -    148725 CT-GAA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27592 5 -     40656 CT-GAA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7556 5 +     20796 CT-GAA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12674 5 -     17524 CT-GAA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28397 5 -     34525 CT-GAA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12177 5 -     25376 CT-GAA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364764 5 -  39242232 CT-GAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270491 5 +  21565898 CT-GAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32859 5 -     45857 CT-GAA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27760 5 -     32606 CT-GAA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3922 5 +      8499 CT-GAA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26318 5 +     70610 CT-GAA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23279 5 +     36323 CT-GAA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13258 5 -     19938 TT-AAA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31193 5 -     33796 TT-GAA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5707 5 -     15404 TT-GAA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9518 5 -     32913 TT-GAA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19931 5 -     40346 TT-GAA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20186 5 +    216457 TT-GAA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19979 5 +     39636 TT-GAA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239325 5 -   2543920 tA-GAG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4574 5 +      5346 TT-GGA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43049 5 -    112038 TT-GAA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8600 5 +     34062 TT-GAA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344180 5 +  18827391 CT-GAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10724 5 -     44032 CT-GAA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305505 5 - 135778131 CT-GAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15389 5 +     15858 TT-AAA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606964 5 -    839153 tt-aaa
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2079 5 +      2406 TT-AAG
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409910 5 -   2368649 CT-GAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379791 5 - 200372422 CT-GAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3348 5 -     84244 CT-GAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807785 5 +  53390261 TT-GAA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3343 5 -      8242 TT-GAA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44837 5 -     83289 TT-GAA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115419 5 - 224834208 TT-GAA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9940 5 +     12657 TT-GAT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4916 5 +     87169 TT-GAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645970 5 -   1526836 CT-GAA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18871 5 +     50838 TA-AGT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4886 5 +     36344 TT-GAG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28662 5 +     75252 TT-GAA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110614 5 -   2246927 TT-AAA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293129 5 +  12879189 TT-GAA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632471 5 -  35494412 TT-GAG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              331030 5 -   2620052 TT-GAC
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665033 5 -   1390856 TT-GAA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139826 5 -    198055 TT-GAA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99410 5 -    115145 TT-GAA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951131 5 -  37912305 TT-GAC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6057 5 -     10735 TT-GAC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856105 5 - 111700974 TG-AAA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6806 5 +     19438 tt-gaa
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240282 5 -    607251 TT-GAA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226305 5 +  10337057 TT-AAC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31561 5 +    110024 TT-GAA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13532 5 +     18970 tt-gaa
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916665 5 +  41312741 TT-GGA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579453 5 +  14770903 TT-GAA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041947 5 -   4378816 TT-GAA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375885 5 +  39960074 TT-GAA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411792 5 -    498745 TT-GAA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666597 5 +   7059049 tt-gaa
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263716 5 +  21539334 CT-GAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71677 5 -    133382 TT-GAG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_705718              253 5 +       377 TT-GAG
i Eubalaena_japonica.EubJap_flattened_line_705718        C 0 C 0
s Eulemur_albifrons.k141_51491                               15338 5 -     24895 TT-GAA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43048 5 -     70999 TT-GAA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87018 5 +    112731 TT-GAA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43580 5 +     68309 TT-GAA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53905 5 -     65740 TT-GAA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24537 5 -     75513 TT-GAA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48732 5 -     97555 TT-GAA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5456 5 +     30972 TT-GAA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43176 5 -     52037 TT-GAA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59579 5 -    111500 TT-GAA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247372 5 - 206538554 TT-GAA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117158 5 - 205367284 TT-GAA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28255 5 -     30238 TT-GAA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916967 5 -   3816255 TT-GAA
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126187 3 -    137831 ---GAC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9732 3 +     22493 ---GAC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21802 3 -     32986 ---GAC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1704 5 -     28519 TT-GAA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91985 5 -     95226 TT-GAG
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            35020 5 -     36801 TT-GAA
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6333 5 -      8343 CT-GAA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255348 5 - 186649187 CT-GAA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2502 5 -     78134 TT-GAA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15263 5 -     40692 TT-GAA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36665 5 +     49394 TT-GAA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61533 5 -     66874 TT-GAA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10407 5 -     42923 TT-GAA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17406 5 -     53142 TT-GAA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31348 5 -    327341 tt-gaa
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9659 5 +     48891 TT-GAA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932944 5 -  22651954 TT-GAG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                4057 5 +      4291 TT-AGC
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8172 5 -     36432 TT-GAG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552164 5 -   1711038 tt-gat
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1602 5 -      2730 TT-GAT
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143357 5 -    630532 CT-GAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70513 5 +     83186 TT-GAA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72406 5 +    143317 TT-GAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 9
s Hylobates_agilis.k141_1155965                               6391 5 +     12352 CT-GAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13575 5 +     55766 CT-GAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053175 5 + 191637585 CT-GAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802053 5 +  11177569 CT-GAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7692 5 -    135385 TT-GAC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387399 5 +   7955117 TT-GAA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2963 5 +     11955 TT-GAA
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10572 5 -     16823 TT-GAG
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240390 5 +   9596543 TC-AAG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72412 5 -     97402 TT-GAG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43793 5 +    110728 TT-GAA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63425 5 -     65777 tt-gaa
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760056 5 +  30322482 TT-GAA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4698 5 -     13097 TT-GGA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4452 5 +      5940 TT-GGA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4275 5 -      5717 TT-GGA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10665 5 -     11567 TT-GGA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12046 5 -     12945 TT-GGA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9568 5 +     29618 TT-GAA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9564 5 +     31569 TT-GAA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9574 5 +     24756 TT-GAA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9574 5 +     16388 TT-GAA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814047 5 -   3914936 TT-GAA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18416 5 +     24238 CT-GAA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341757 5 +    662738 TT-GAG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334712 5 -   1826925 CT-GAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11885 3 +     19643 ---GAC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045555 3 -   6120653 ---GAC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39084742 5 +  43346337 tt-aaa
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615213 5 +  59628241 tt-aaa
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46101 5 -     61512 CT-GAA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373763 5 -  60120075 CT-GAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26031 5 +     30207 CT-GAA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             869 5 -      5035 CT-GAA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25984 5 +     30527 CT-GAA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37160 5 -     50087 CT-GAA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46904 5 +     51645 CT-GAA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416107 5 - 187317192 CT-GAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400337 5 +  25927173 CT-GAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49509 5 -     62418 CT-GAA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2040 5 +     14901 CT-GAA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45981 5 +     59329 CT-GAA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271889 5 +    668171 CT-GAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   527 5 -      5049 CT-GAA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3687 5 +     17132 CT-GAA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223773 5 -    270270 TC-GAA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323177 5 +  24302211 CT-GAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358008 5 -    752769 CT-GAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674100 5 -    737560 TT-GGA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221396 5 +    317179 TT-GGA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501617 5 +  40650429 TT-GAA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150942 5 +    207569 TT-GCA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26764 5 -     74585 TT-GGA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50740 3 -    140813 T---CA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429799 5 +  29670104 TT-AAA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88041 5 +     93471 TT-GAG
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10832 5 +     17804 TT-GGA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11332 5 -     12984 TT-GGA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19648 5 -     26561 TT-GGA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985406 5 +  93316391 TT-GAT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47340 5 +    145209 TT-AAA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185632 5 +    200668 TT-GAC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963006 5 +  27267610 tt-gaa
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363788 5 -   8254450 tt-gaa
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42695 5 -     48117 tt-gaa
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23211 5 -     27822 CT-GAA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9058 5 +     27589 TT-GAA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53189 5 -     62432 TT-GAA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360146 5 +    437263 TT-GAG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179864 5 +    366855 TG-GAC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26107 5 -     82753 TT-GAG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19073 5 -     63510 TT-GAA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39756 5 +     47283 TT-GAA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593718 5 + 120012414 TT-GAA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688107 5 + 129401213 TT-GAA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497401 5 + 130317789 TT-GAA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84058 5 -     86153 TT-GAA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355686 5 +  14710649 TT-GGA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63654 5 +     67721 TG-AAT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794012 5 +  10118263 TT-GAA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388185 5 +   6019432 TT-GAA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               383973 5 +   4330536 TT-GAA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3006 5 +     18357 TT-GAA
i Myotis_myotis.MyoMyo_scaffold_66571                    I 224 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120361 5 +    130748 TT-AAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946875 5 +   3037898 TT-GAT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29867 5 +     34575 CT-GAA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232822 5 -   7148211 TT-GAG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_7894                   128829 5 -    149072 TT-GAC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54283 5 -    132029 CT-GAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10378 5 -     16345 CT-GAA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16263 5 +     22201 CT-GAA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414484 5 -  22158432 CT-GAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26661 5 -     54323 CT-GAA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198809 5 +   9404916 tt-aaa
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638784 3 + 196305487 ---GAC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1387 3 -      9413 ---GAC
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566167 3 - 199412804 ---GAC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557474 5 -   3988456 TT-GAA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055610 5 -  11899542 TA-AAT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452264 5 +   2017862 tt-gaa
i Odobenus_rosmarus.KB229312.1                           C 0 I 211
s Odocoileus_virginianus.KZ100018.1                         436875 5 -    630418 TT-GAA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15069 5 +    150152 TT-GAG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93358 5 -    140218 TT-GAA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4227 5 -     41509 TT-GAA
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103214 5 +  10937097 TT-GAG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                260 5 +     11607 TT-AAA
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104210 5 - 174332312 CT-GAA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39854 5 +    559221 tt-aaa
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41335 3 -     51505 ---GAC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354338 3 +   1103335 ---gac
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404779 5 -  44047080 TT-GAA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5298 5 +     17875 TT-GAA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473377 5 - 189151597 CT-GAA
i Pan_troglodytes.CM009242.2                             C 0 I 21
s Panthera_onca.PanOnc_flattened_line_3271                   25078 5 -    230217 TT-GAA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462404 5 -  18783137 TT-GAA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973063 5 +   8748460 TT-GAA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616307 5 +   2937107 TT-GAA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244009 5 - 183742232 CT-GAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10471 5 +     21308 CT-GAA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293044 5 -  20919399 CT-GAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23119 5 -     27687 CT-GAA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16265 5 +     16796 CT-GAA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23076 5 -     23640 CT-GAA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15676 5 +     78924 TT-GAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27665 3 +     31479 ---GAT
i Perodicticus_ibeanus.k141_1921260                      I 1 C 0
s Perodicticus_potto.k141_1854441                            20033 3 -     24908 ---GAT
i Perodicticus_potto.k141_1854441                        I 1 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2489 5 +      9367 TT-GAA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247437 5 +  18517816 TT-GAA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4740 5 -     63832 TT-GAG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3298 5 +     55023 CT-GAA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2836 5 -     89929 CT-GAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3426 5 +     40849 CT-GAA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255101 5 +  14605196 CT-GAA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4602 5 +     22231 TT-GAA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65416 5 +    207309 TT-GAA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6508 5 -     25401 TT-GAA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32252 5 +     58159 TT-GAA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32528 5 +     63561 TT-GAA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32288 5 +     51148 TT-GAA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557258 5 -   4542175 TT-GAA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32272 5 +     51125 TT-GAA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1757 5 +     19503 TT-GAG
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8683 5 +     39866 TT-GAA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3765 5 -      9282 TT-GAA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43169 5 -     87950 TT-GAA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43565 5 -     88961 TT-GAA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8261 5 -     39403 TT-GAA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43212 5 +     87928 TT-GAA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8260 5 -     60166 TT-GAA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15197 5 -     67232 TT-GAA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43113 5 -     90634 TT-GAA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44580 5 +     89403 TT-GAA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178487 5 - 189387572 CT-GAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193304 5 -   9816681 CT-GAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28447 5 +     69807 CT-GAA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45628 5 -     80239 CT-GAA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 3959 5 +      7663 TT-AGC
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983204 5 +   4620579 TT-GAA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566714 5 -   2598838 TT-GAG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4352 5 -      7103 CT-GAG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4949 5 -     11706 TT-GAG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8687 5 -     30655 TT-GAG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35000 5 +     46564 TT-GAG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95279 5 -     98465 TT-GAG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8918 5 +     35169 TT-GAG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38039 5 +     52041 TT-GAA
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52757 5 -     66298 TT-GAC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5260 5 -     18639 TT-GGC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841346 5 -  28871421 TT-GAA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537861 5 -   4952924 TT-GAA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099721 5 +  38429054 TT-GAA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27816 5 +     91421 CT-GAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154300 5 -   7812017 CT-GAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8673 5 +     72585 CT-GAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53792 5 +     55069 TT-GAA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023323 5 -  90668790 TT-GAA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915326 5 +   3329780 tt-gaa
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2401 5 +      7119 CT-GAA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123017 5 + 195417433 CT-GAA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237243 5 -   7961872 CT-GAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75845 5 -    116970 CT-GAA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4572 5 +     27962 TT-GGA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4466 5 +      6077 TT-GGA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4556 5 +      5971 TT-GGA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4477 5 +      5932 TT-GGA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2819 5 -      4390 TT-GGA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392256 5 - 209938924 TT-GGA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4425 5 +      5979 TT-GGA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                                995 5 -     22275 TT-GGA
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8467 5 +     16473 TT-GAA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109592 5 + 121099817 TT-GGA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31159 5 -     47369 TT-GGA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31545 5 -     79414 TT-GGA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28236 5 -     34454 TT-GGA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15637 5 -     22428 TT-GGA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30791 5 -     47109 TT-GGA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238837 5 +   5703754 CT-GGA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8427 5 +     21866 CT-GGA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116489 5 +    313613 TT-GAA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26142 5 +     27374 CT-GAA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29654 5 +     58920 CT-GAA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16152 5 -     45317 CT-GAA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23810 5 -     42441 CT-GAA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26488 5 -     29113 CT-GAA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29563 5 -     48123 CT-GAA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49818 5 +     77746 GT-GAG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864762 5 -   1910179 TT-GAA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671873 5 +  18376816 tT-AAA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868977 5 +   3870691 TT-GAA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7350 5 -     97271 TT-GAC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125489 5 +    196729 TT-GAA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644374 5 +  69701581 TT-GAG
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391743 5 +   1523678 CT-GAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14923 5 +     22964 tt-gaA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3352 5 +      5583 TT-AAA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192226 5 +    199430 TT-GAA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106196 5 -    539355 TT-GAA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1262 5 +      9917 TT-GAA
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8060 5 +     20590 TT-GAA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           353995 5 - 186847797 CT-GAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24688 5 -     33621 TT-AAG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20337 5 -     31044 TT-AAA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480750 5 -    610378 TT-GAC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21687 5 +     26378 CT-GAA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34363 5 -     78344 CT-GAA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21012 5 +     25722 CT-GAA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29319 5 -     62838 CT-GAA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29363 5 +     46913 CT-GAA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10172 5 -     28527 CT-GAA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31254 5 -     64340 CT-GAA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29292 5 -     63452 CT-GAA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10739 5 +     22490 CT-GAA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4162 5 -      6147 CT-GAA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11075 5 -     13050 CT-GAA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256305 5 -   6242583 CT-GAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2333 5 +     19340 CT-GAA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174081 5 -    200418 TT-GAG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6481508 5 -  10818551 TT-AAC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366327 5 -  33153633 TT-GAG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4216 5 -     21056 TT-GAA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182650 5 +   5085361 tt-gaa
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25856 5 -     30710 TT-GAA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24763 5 -    147434 TT-GAA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76908 5 +   5488506 TG-AAG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105575 5 -    112863 TT-AAA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174769 5 -    224448 TT-GAA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29472 5 -     86975 tt-gaa
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 211
s Zapus_hudsonius.ZapHud_scaffold_286923                       576 5 -      1899 TT-CAA
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1611 5 +      2126 TT-GAG
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Petromus_typicus.PetTyp_scaffold_17301                     32530 0 -     56120 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Tupaia_tana.TupTan_flattened_line_394                       9009 0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1834989 0 -   4065304 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6038 21 +     36723 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
s Acinonyx_jubatus.LLWD01001279.1                           813468 15 +   1699592 T--G-------T-T-ACATCA---TAC-GG---------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 5
s Acomys_cahirinus.AcoCah_scaffold_21377                     25709 21 +     63021 T--A-------T-T-GTGTCA---TGTGT--T--TTAAA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415919 21 +  29979442 t--a-------t-t-acatca---tat-ga-a--ttaaa
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216264 21 +    347723 t--a-------t-t-acatca---tat-ga-a--ttaaa
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18616 21 -     61208 A--A-------T-T-ATATCA---TGC-AA-C--TTAAA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48683 21 +     53615 T--A-------T-T-ACATCA---TAT-TA-G--TTAAA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           714 21 +     13857 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17265 21 -     21945 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18950 21 +     32033 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72784 21 -     84148 T--A-------T-G-ACATCA---TAC-GA-G--TTAAA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45023 21 -     78289 T--A-------T-G-ACATCA---TAC-GA-G--TTAAA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44462 21 +     55831 T--A-------T-G-ACATCA---TAC-GA-G--TTAAA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42912 21 -     64179 T--A-------T-G-ACATGA---TAC-GA-G--TTAAA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24546 21 -     24835 T--A-------T-G-ACATCA---TAC-GA-G--TTAAA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41537 21 +     45454 T--A-------T-G-ACATCA---TAC-GA-G--TTAAA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47186 21 +     70886 T--A-------T-G-ACATCA---TAC-GA-G--TTAAA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9359 21 +     30854 T--A-------T-G-ACATCA---TAC-GA-G--TTAAA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33493 21 +     42133 T--A-------T-G-ACATCA---TAC-GA-G--TTAAA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585917 21 +   2318259 T--A-------T-G-ACATCA---TCC-AA-A--TTAAA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177718 14 -    412891 T--G-------T-T-ACATCA---TAT-G----------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 4
s Antilocapra_americana.AntAmePen_scaffold_21030             51024 21 -     68529 T--A-------T-A-ACATCA---TAC-AA-A--TTAAA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1750 21 +     17741 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2375 21 -     15923 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672657 21 +   5030052 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2651 21 -     16391 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2210 21 -     17186 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16729 21 -     32367 T--A-------T-T-ACATTA---CAC-AA-G--TTAAA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20822 21 -     45910 T--A-------T-T-TCATGA---TAT-GG-G--TTGGA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  5984 14 -     15198 T--G-------T-T-ACATCA---CAC-G----------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 4
s Ateles_geoffroyi_b.tarseq_1536                               275247 21 +  21539123 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11415 21 +     48076 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6550 21 -     28759 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34104 21 +     44353 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49475 21 -     71267 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23533 21 -     33135 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6824 21 +     11645 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6832 21 -     19611 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964068 21 -  23207421 T--A-------T-G-ACATCA---TCT-GA-A--TTAAA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          568 21 -     25979 T--A-------T-G-ACATCA---TCT-GA-A--TTAAA
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86925 21 +    124022 T--A-------T-G-ACATCA---TCC-AA-A--TTAAA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22467 21 +    288883 T--A-------T-G-ACATCA---CCC-AA-A--TTAAA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356857 21 +  48749331 T--A-------T-G-ACATCA---CCC-AA-A--TTAAA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755421 21 +   1948126 T--A-------T-G-ACATCA---CCC-AA-A--TTAAA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545563 21 -  45695690 T--A-------T-G-ACATCA---CCC-AA-A--TTAAA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530578 21 -   4408762 T--A-------T-G-ACATCA---CCC-AA-A--TTAAA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8423 21 +     28062 T--A-------T-T-GCATCA---TAC-AA-G--TTAAA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43717 21 -     91139 T--A-------T-T-GCATCA---TAC-AA-G--TTAAA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21243 21 +     95584 T--A-------T-T-GCATCA---TAC-AA-G--TTAAA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21156 21 +    119600 T--A-------T-T-GCATCA---TAC-AA-G--TTAAA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10730 21 +     18648 T--A-------T-T-ACATCA---TAC-AA-G--TTCAA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10265 21 -     13885 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2335 21 -      8861 T--A-------T-T-ACATCA---TAC-AA-G--TTCAA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454727 21 + 189096842 T--A-------T-T-ACATCA---TAC-AA-G--TTCAA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2250 21 +      8664 T--A-------T-T-ACATCA---TAC-AA-G--TTCAA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631582 19 +  17673402 T--A-------T-G-ATATC----TC--GA-A--TTAAA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665868 20 +   7040546 T--A-------T-G-ATATCA---TC--GA-A--TTAAA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209528 19 +   1652518 T--A-------T-G-ATATC----TC--GA-A--TTAAA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505949 21 +  60362399 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9585 21 -     23171 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222928 21 +   9314153 t--a-------t-t-acATCA---TAC-AA-G--TTAAA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616063 21 +  59632846 t--a-------t-t-acATCA---TAC-AA-G--TTAAA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107644 21 -  63665305 t--a-------t-t-acATCA---TAC-AA-G--TTAAA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409646 21 -  46296322 T--A-------T-G-ACATCA---TCC-AA-A--TTAAA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591920 21 +  44709034 T--A-------T-G-ACATCA---TCC-AA-A--TTAAA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                     88 28 -      1607 C--AAACTCAAT-T-TCATCA---AAC-AA-G--TTAAA
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271035 21 +    496798 T--A-------T-T-ACATCA---TAT-AA-G--TTAGA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                840 14 +      9923 T--G-------T-T-ACATCA---TAC-G----------
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 4
s Castor_canadensis.CasCan_scaffold_39952                    28241 17 -     39886 ---------------ACAACA---TAC-AA-G--TTAAG
i Castor_canadensis.CasCan_scaffold_39952                I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80122 21 -    217609 T--A-------T-G-ATATCA---CCC-GA-A--TTAAA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996974 12 +  23392119 --------------------a---aat-aa-g--TTAAA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000415 12 +  23407841 --------------------a---aat-aa-g--ttaaa
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63496 12 -     66877 --------------------A---AAT-AA-G--TTAAA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5648 21 -     12580 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43705 21 +     53515 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373468 21 -  26074798 T--A-------T-T-ACATCA---CAC-AA-G--TTAAA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8522 21 -     34880 T--A-------T-T-ACATCA---CAC-AA-G--TTAAA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67618 21 -     89041 T--A-------T-T-ACATCA---CAC-AA-G--TTAAA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         2995 21 -      5494 T--A-------T-T-ACATCA---TAT-AA-G--TTAGA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492754 21 -  27778364 T--A-------T-T-ACATCA---TAT-GA-A--TTAAA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19587 21 +     27315 T--A-------T-T-ACATCA---TAT-GA-A--TTAAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141832 21 -   4669795 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45575 22 +     47900 T--A-------T-TNACATCA---TAT-GA-G--TTAAA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1004 21 -     14410 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45388 21 -    148725 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27597 21 -     40656 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7561 21 +     20796 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12679 21 -     17524 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28402 21 -     34525 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12182 21 -     25376 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364769 21 -  39242232 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270496 21 +  21565898 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32864 21 -     45857 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27765 21 -     32606 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3927 21 +      8499 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26323 21 +     70610 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23284 21 +     36323 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13263 21 -     19938 C--G-------T-G-GCATCA---TGC-AA-C--TTAAA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31198 21 -     33796 T--A-------T-G-ACATCA---TAT-GA-G--TTAAA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5712 21 -     15404 T--G-------T-G-ACATCA---TAT-GA-G--TTAAA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9523 21 -     32913 T--A-------T-T-ACCTCA---TAC-AA-G--TTAAA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19936 21 -     40346 T--A-------T-T-ATCTCA---TAC-AA-G--TTAAA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20191 21 +    216457 T--A-------T-T-ACCTCA---TAC-AA-G--TTAAA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           19984 21 +     39636 T--A-------T-T-ACCTCA---TAC-AA-G--TTAAA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239330 21 -   2543920 T--A-------T-T-ACATCA---AGC-AA-G--TTAAA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4579 21 +      5346 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43054 21 -    112038 T--A-------T-T-GCATCA---TAC-AA-G--TTAAA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8605 21 +     34062 T--A-------T-T-GCATCA---TAC-AA-G--TTAAA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344185 21 +  18827391 T--A-------T-T-ACGTCA---TAT-GA-G--TTAAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10729 21 -     44032 T--A-------T-T-ACGTCA---TAT-GA-G--TTAAA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305510 21 - 135778131 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15394 21 +     15858 T--A-------T-T-TCATCA---TAT-GA-A--TTCAG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606969 21 -    839153 t--a-------t-t-tcatca---tat-ga-a--tTCAG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2084 21 +      2406 T--A-------T-T-ACCTCG---TGC-TA-A--TTAAA
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409915 21 -   2368649 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379796 21 - 200372422 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3353 21 -     84244 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807790 20 +  53390261 T--A-------T-T-CCATGA---TAT-GA-A--TA-TT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3348 21 -      8242 T--A-------C-T-ACATCA---TAC-AA-A--TTCAA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44842 15 -     83289 T--A-------T-T-GCATCC---TGC-AA---------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115424 21 - 224834208 T--A-------C-T-GTACTA---TGT-AA-T--TTAAA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9945 18 +     12657 T-TT-------T-T-ACT------TAT-GA-A--TT-AA
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4921 21 +     87169 T--A-------T-T-ACATCA---TAC-GG-A--TTAAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645975 21 -   1526836 T--A-------T-T-ACATTA---TAC-AA-G--TTAAA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18876 28 +     50838 C--AAACTCCAT-T-TCATGA---AAC-AA-G--TTAAA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4891 21 +     36344 T--A-------T-T-ATATCA---AAC-AA-G--TTAAA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28667 21 +     75252 C--A-------T-T-GTATCA---AAC-AA-G--TTAAA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110619 21 -   2246927 T--G-------T-T-GCATTA---TGC-GA-G--TTAGA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293134 21 +  12879189 T--A-------T-T-GCATCA---TAT-GA-G--TTAAA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632476 21 -  35494412 T--A-------T-T-ACATCA---TCT-GA-A--TTAAA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              331035 14 -   2620052 T--G-------T-T-ACATCA---TAT-G----------
i Desmodus_rotundus.KZ672366.1                           C 0 I 4
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665038 21 -   1390856 T--A-------T-T-ACATCA---TAT-GA-A--TTAAA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139831 21 -    198055 T--A-------T-T-ACATCA---TAT-GA-A--TTAAA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99415 21 -    115145 T--A-------T-T-ACATCA---AAC-AA-G--TTAAA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951136 21 -  37912305 T--A-------T-T-ATATCA---CCC-AA-G--TTAAA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6062 21 -     10735 T--A-------T-T-ATATCA---CCC-AA-G--TTAAA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856110 21 - 111700974 T--A-------T-A-ACCTCA---TGC-CA-A--TTAAA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6811 21 +     19438 t--a-------t-t-atatta---tat-ga-a--ttaaa
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240287 21 -    607251 A--A-------T-G-ACATCA---TCC-AA-A--TTAAA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226310 21 +  10337057 T--C-------T-A-ACCTCA---TGT-TA-A--TTAAA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31566 21 +    110024 T--A-------A-T-GTACCA---TAC-AG-T--TTAAA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13537 21 +     18970 t--a-------t-t-GTACCA---TAC-AA-T--TTAAA
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916670 21 +  41312741 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579458 13 +  14770903 T--A-------T-T-GCATCA---TAC------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 5
s Equus_asinus.JREZ01000139.1                              3041952 21 -   4378816 T--A-------T-T-ACCTCA---TAT-GA-A--TTAAA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375890 21 +  39960074 T--A-------T-T-ACATCA---TAC-GA-A--TTAAA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411797 21 -    498745 T--A-------T-T-ACATCA---TAC-GA-A--TTAAA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666602 15 +   7059049 t--a-------t-a---a------tat-ga-c--tt-aa
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263721 21 +  21539334 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71682 21 -    133382 T--A-------T-G-ACATCA---TCT-GA-A--TTAAA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_705718              258 21 +       377 T--A-------T-G-ACATCA---TCT-GA-A--TTAAA
i Eubalaena_japonica.EubJap_flattened_line_705718        C 0 C 0
s Eulemur_albifrons.k141_51491                               15343 12 -     24895 T--A-------T-T-ACATTG---TA-------------
i Eulemur_albifrons.k141_51491                           C 0 I 5
s Eulemur_collaris.k141_601111                               43053 12 -     70999 T--A-------T-T-ACATTG---TA-------------
i Eulemur_collaris.k141_601111                           C 0 I 5
s Eulemur_coronatus.k141_384460                              87023 12 +    112731 T--A-------T-T-ACATCG---TA-------------
i Eulemur_coronatus.k141_384460                          C 0 I 5
s Eulemur_flavifrons.k141_433119                             43585 12 +     68309 T--A-------T-T-ACATTG---TA-------------
i Eulemur_flavifrons.k141_433119                         C 0 I 5
s Eulemur_fulvus.k141_636316                                 53910 12 -     65740 T--A-------T-T-ACATTG---TA-------------
i Eulemur_fulvus.k141_636316                             C 0 I 5
s Eulemur_macaco.k141_1562045                                24542 12 -     75513 T--A-------T-T-ACATTG---TA-------------
i Eulemur_macaco.k141_1562045                            C 0 I 5
s Eulemur_mongoz.k141_232305                                 48737 12 -     97555 T--A-------T-T-ACATCG---TA-------------
i Eulemur_mongoz.k141_232305                             C 0 I 5
s Eulemur_rubriventer.k141_1423786                            5461 12 +     30972 T--A-------T-T-ACATTG---TA-------------
i Eulemur_rubriventer.k141_1423786                       C 0 I 5
s Eulemur_rufus.k141_514691                                  43181 12 -     52037 T--A-------T-T-ACATTG---TA-------------
i Eulemur_rufus.k141_514691                              C 0 I 5
s Eulemur_sanfordi.k141_1122526                              59584 12 -    111500 T--A-------T-T-ACATTG---TA-------------
i Eulemur_sanfordi.k141_1122526                          C 0 I 5
s Felis_catus.CM001381.2                                 186247377 15 - 206538554 A--G-------T-T-ACATCA---TAC-GG---------
i Felis_catus.CM001381.2                                 C 0 I 5
s Felis_catus_fca126.CM031415.1                          185117163 15 - 205367284 A--G-------T-T-ACATCA---TAC-GG---------
i Felis_catus_fca126.CM031415.1                          C 0 I 5
s Felis_nigripes.FelNig_flattened_line_31944                 28260 15 -     30238 T--G-------T-T-ACATCA---TAC-GG---------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 6
s Fukomys_damarensis.KN121974.1                            2916972 21 -   3816255 T--A-------T-C-ACAtca---aac-aa-a--ttata
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126190 21 -    137831 T--A-------T-T-CCATGA---TAT-GA-G--TTGGA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9735 21 +     22493 T--A-------T-T-CCATGA---TAT-GA-G--TTGGA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21805 21 -     32986 T--A-------T-T-CCATGA---TAT-GA-G--TTGGA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1709 21 -     28519 T--A-------T-C-ACATCA---CAG-GA-G--TTGAA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      91990 21 -     95226 T--A-------T-A-ACATCA---TCC-AA-A--TTAAA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            35025 21 -     36801 T--A-------T-T-ATATAA---TGC-AA-G--ATAAA
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6338 21 -      8343 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255353 21 - 186649187 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2507 21 -     78134 T--A-------C-T-ATATAG---TGC-AA-G--ACAAA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15268 21 -     40692 T--A-------T-T-ACATCG---TGT-GA-G--TTAAA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36670 21 +     49394 T--A-------T-T-ACATCG---TGT-GA-G--TTAAA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61538 21 -     66874 T--A-------T-T-ACATCG---TGT-GA-G--TTAAA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10412 21 -     42923 T--A-------T-T-ACATCG---TGT-GA-G--TTAAA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17411 21 -     53142 T--A-------T-T-ACATCG---TGT-GA-G--TTAAA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31353 21 -    327341 t--a-------t-t-acatca---tat-gg-a--ttaaa
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9664 21 +     48891 T--A-------T-G-ACATCA---TCC-AA-A--TTAAA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932949 21 -  22651954 T--A-------T-T-ACATCA---AAC-AA-G--TTAAA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                4062 21 +      4291 T--A-------G-A-CCTTTA---GGC-AA-A--TAAAA
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8177 21 -     36432 T--A-------T-G-ACATCA---TCT-GA-A--TTAAA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552169 21 -   1711038 t--a-------t-T-ACATCA---TAT-GA-A--TTAAA
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1607 21 -      2730 T--A-------T-T-ACATCA---TAT-GA-A--TTAAA
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143362 21 -    630532 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70518 21 +     83186 T--A-------C-T-ACATCA---TAT-GG-A--TGAAA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72420 12 +    143317 --------------------A---AAC-AA-G--TTAAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 9 C 0
s Hylobates_agilis.k141_1155965                               6396 21 +     12352 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13580 21 +     55766 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053180 21 + 191637585 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802058 21 +  11177569 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7697 22 -    135385 T--A-------T-TNACATCA---AAC-GA-G--TTAAA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387404 21 +   7955117 T--G-------T-T-ACATCA---TGC-AA-G--TTAAA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2968 21 +     11955 T--A-------T-T-GCATCA---TAT-GA-G--TTAAA
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10577 21 -     16823 T--A-------T-G-ACATCA---TCT-GA-A--TTAAA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240395 21 +   9596543 T--A-------T-T-ACATCA---TGT-AA-C--TTAAA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72417 21 -     97402 T--A-------T-G-ACATCA---TCT-GA-A--TTAAA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43798 21 +    110728 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63430 14 -     65777 t--a-------g-t-gcatca---tAC-A----------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 19
s Lemur_catta.scaffold_24                                 14760061 21 +  30322482 T--A-------T-T-ACATCG---TGT-GA-G--TTAAA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4703 21 -     13097 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4457 21 +      5940 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4280 21 -      5717 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10670 21 -     11567 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12051 21 -     12945 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9573 21 +     29618 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9569 21 +     31569 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9579 21 +     24756 T--A-------T-T-ACATCC---TAT-GA-G--TTAAA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9579 21 +     16388 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814052 21 -   3914936 T--A-------T-T-ATGTCA---TAT-GA-A--TGAAA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18421 21 +     24238 T--A-------C-T-CCCTCA---TAA-GA-G--TTAAA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341762 21 +    662738 T--A-------T-G-ACATCA---TCT-CA-A--TTAAA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334717 21 -   1826925 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11888 21 +     19643 T--A-------T-T-CTGTGA---TAT-GA-G--TTGGA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045558 21 -   6120653 T--A-------T-T-CTGTGA---TAA-GA-G--TTGGA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39084747 21 +  43346337 t--a-------t-a-actTTA---TGC-AA-A--TGAAA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615218 21 +  59628241 t--a-------t-t-acaTCA---TAC-AA-G--TTAAA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46106 21 -     61512 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373768 21 -  60120075 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26036 21 +     30207 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             874 21 -      5035 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 25989 21 +     30527 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37165 21 -     50087 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46909 21 +     51645 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416112 21 - 187317192 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400342 21 +  25927173 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49514 21 -     62418 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2045 21 +     14901 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 45986 21 +     59329 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271894 21 +    668171 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   532 21 -      5049 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3692 21 +     17132 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223778 21 -    270270 T--A-------G-T-ACATTA---TAT-GA-A--TTAAA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323182 21 +  24302211 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358013 21 -    752769 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674105 21 -    737560 T--G-------T-T-GCATCA---TAT-GA-A--TGAAA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221401 21 +    317179 T--G-------T-T-GCATCA---TAT-GA-A--TGAAA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501622 21 +  40650429 T--G-------T-T-ACATCA---TGC-AA-G--TTAAA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150947 21 +    207569 T--A-------T-T-ACATCA---TAC-GA-A--TTAAA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26769 21 -     74585 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50743 13 -    140813 T--A-------T-T-GTATCA---TGC------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 2
s Mesocricetus_auratus.KB708134.1                         17429804 21 +  29670104 T--A-------T-T-GTACTA---TGC-AA-T--TTAAA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88046 21 +     93471 T--A-------T-G-ACATCA---TCT-GA-A--TTAAA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10837 21 +     17804 T--A-------T-T-ACATCA---TAC-AA-G--TTCAA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11337 21 -     12984 T--A-------T-T-ACATCA---TAC-AA-G--TTCAA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19653 21 -     26561 T--A-------T-T-ACATCA---TAC-AA-G--TTCAA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985411 21 +  93316391 T--A-------T-G-ACATCA---TAT-GA-G--TTAAA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47345 21 +    145209 C--A-------C-A-ACCTCG---TGC-TC-A--TTCAA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185637 14 +    200668 T--G-------T-T-ACATCA---TAT-G----------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 4
s Microtus_ochrogaster.CM001695.1                         15963011 21 +  27267610 t--a-------t-t-gtACCA---TAC-AA-T--TTAAA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363793 14 -   8254450 t--a-------T-T-ACATCC---TAT-G----------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 4
s Miniopterus_schreibersii.MinSch_scaffold_23309             42700 14 -     48117 t--a-------T-T-ACATCC---TAT-G----------
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 4
s Miopithecus_ogouensis.k141_1534655                         23216 21 -     27822 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9063 21 +     27589 T--A-------T-T-ATGTCA---TAT-GA-A--TTAAA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53194 21 -     62432 T--A-------T-G-ACATCA---TAT-GA-G--CTAAA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360151 21 +    437263 T--A-------T-G-ACATCA---TCT-GA-A--TTAAA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179869 14 +    366855 T--A-------T-T-ACATCA---TAC-A----------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 4
s Moschus_moschiferus.MosMos_scaffold_13123                  26112 21 -     82753 T--A-------T-G-ATATCA---TCC-AA-A--TTAAA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19078 21 -     63510 T--A-------T-T-ACATCA---TAT-GG-A--TTAAA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39761 14 +     47283 T--A-------T-T-GCATCA---TTC-A----------
i Murina_feae.MurFea_scaffold_17764                      C 0 I 4
s Mus_caroli.LT608237.1                                   35593723 20 + 120012414 T--A-------T-T-GTGTGA---TTC-A--T--TTAAA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688112 20 + 129401213 T--A-------T-T-GTGTGA---TTC-A--T--TTAAA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497406 20 + 130317789 T--A-------T-T-GTGTGA---TTC-A--T--TTAAA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84063 21 -     86153 T--A-------T-T-ACATAG---TTC-AA-A--ATAAA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355691 21 +  14710649 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63659 28 +     67721 C--AAACTCAGT-T-TCATCA---AAT-AA-G--TTAAA
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794017 14 +  10118263 T--A-------T-T-GCATCA---TAC-G----------
i Myotis_brandtii.KE162005.1                             C 0 I 4
s Myotis_davidii.KB100139.1                                4388190 14 +   6019432 T--A-------T-T-GCATCA---TAC-A----------
i Myotis_davidii.KB100139.1                              C 0 I 4
s Myotis_lucifugus.GL429869.1                               383978 14 +   4330536 T--A-------T-T-GCATCA---TAC-A----------
i Myotis_lucifugus.GL429869.1                            C 0 I 4
s Myotis_myotis.MyoMyo_scaffold_66571                         3011 14 +     18357 T--A-------T-T-GCATCA---TAC-A----------
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120366 21 +    130748 T--G-------T-T-GCATCA---CGT-GC-A--TTAGA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             946880 21 +   3037898 T--A-------T-T-GAATAA---TGC-AA-C--TTAAA
i Nannospalax_galili.KL204047.1                          C 0 I 412
s Nasalis_larvatus.k141_1350636                              29872 21 +     34575 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232830  8 -   7148211 ----------------------------GA-A--TTAAA
i Neophocaena_asiaeorientalis.KZ687982.1                 I 3 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128834 14 -    149072 T--A-------T-T-ACATCA---TAC-G----------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 4
s Nomascus_annamensis.k141_1771965                           54288 21 -    132029 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10383 21 -     16345 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16268 21 +     22201 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414489 21 -  22158432 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26666 21 -     54323 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198814 21 +   9404916 t--a-------t-t-acaTCA---TAC-AA-G--TTAAA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638787 21 + 196305487 T--A-------T-T-CCGTGA---TAT-GA-G--TTGAA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1390 21 -      9413 T--A-------T-T-CCGTGA---TAT-GA-G--TTGAA
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566170 21 - 199412804 T--A-------T-T-CCGTGA---TAT-GA-G--TTGAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557479 20 -   3988456 C--A-------T-T-ACTTCA----AC-AA-G--TTTAA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055615 28 -  11899542 C--AAACTCATT-T-TCATCA---AAC-AA-G--TTAAA
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452480 21 +   2017862 t--a-------t-t-aTGTCA---TAT-GA-A--TTAAA
i Odobenus_rosmarus.KB229312.1                           I 211 C 0
s Odocoileus_virginianus.KZ100018.1                         436880 21 -    630418 A--A-------T-G-ACATCA---TCC-AA-A--TTAAA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15074 21 +    150152 T--A-------T-A-ACATCA---TCC-AA-A--TTAAA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93363 21 -    140218 T--A-------T-T-GTACCA---TAC-AT-T--TTAAA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4232 21 -     41509 T--A-------T-T-GTACCA---TGC-AG-T--GTAAA
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103219 21 +  10937097 T--A-------T-G-ACATCA---TCT-GA-A--TTAAA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                265 21 +     11607 T--A-------T-A-ACCTTG---TGC-TA-A--TTAAA
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104215 21 - 174332312 T--A-------C-T-CCCTCA---TAA-GA-A--TTAAA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39859 21 +    559221 t--a-------t-t-acaTCA---TAC-AA-G--TTAAA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41338 21 -     51505 T--A-------T-T-CCATGA---TAT-GA-G--TTGGA
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354341 21 +   1103335 t--a-------t-t-ccaTGA---TAT-GA-G--TTGGA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404784 21 -  44047080 T--A-------T-G-ACATCA---TCC-AA-A--TTAAA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5303 21 +     17875 T--A-------T-G-ACATCA---TCC-AA-A--TTAAA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             13024 27 -     26668 T--A-------TAT-ACATCAAAGTAT-GA-GTATAAGA
i Pan_troglodytes.NBAG03003091.1                         I 174 I 6
s Panthera_onca.PanOnc_flattened_line_3271                   25083 21 -    230217 T--G-------T-T-AACTCC---TAC-GG-A--TAAAA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462409 21 -  18783137 T--G-------T-T-AACTCC---TAC-GG-A--TAAAA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973068 21 +   8748460 T--G-------T-T-ACCTCC---TAC-GG-A--TAAAA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616312 21 +   2937107 T--A-------T-G-ACATCA---TCC-AA-A--TTAAA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244014 21 - 183742232 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10476 21 +     21308 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293049 21 -  20919399 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23124 21 -     27687 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16270 21 +     16796 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23081 21 -     23640 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15681 21 +     78924 T--A-------T-T-ACATCA---TAT-GG-A--TTAAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27668 21 +     31479 T--A-------T-T-TCATGA---CAT-GG-G--TTGGA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20036 21 -     24908 T--A-------T-T-TCATGA---TAT-GG-G--TTGGA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2494 21 +      9367 T--A-------T-T-ACATTA---CCC-AG-G--TTAAA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247442 21 +  18517816 T--A-------T-T-GTACCA---TGC-AG-T--GTAAA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32530  6 -     56120 -------------------------------G--TTAAG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4745 21 -     63832 T--A-------T-G-ACATCA---TCT-GA-A--TTAAA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3303 21 +     55023 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2841 21 -     89929 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3431 21 +     40849 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255106 21 +  14605196 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4607 13 +     22231 T--A-------T-T-GCATCA---TAC------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 5
s Pithecia_albicans.k141_1239476                             65421 21 +    207309 T--A-------T-T-GCATCA---TAC-AA-G--TTAAA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6513 21 -     25401 T--A-------T-T-GCATCA---TAC-AA-G--TTAAA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32257 21 +     58159 T--A-------T-T-GCATCA---TAC-AA-G--TTAAA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32533 21 +     63561 T--A-------T-T-GCATCA---TAC-AA-G--TTAAA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32293 21 +     51148 T--A-------T-T-GCATCA---TAC-AA-G--TTAAA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557263 21 -   4542175 T--A-------T-T-GCATCA---TAC-AA-G--TTAAA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32277 21 +     51125 T--A-------T-T-GCATCA---TAC-AA-G--TTAAA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1762 21 +     19503 T--A-------T-G-ACATCA---TCT-GA-A--TTAAA
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8688 21 +     39866 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3770 21 -      9282 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43174 21 -     87950 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43570 21 -     88961 T--A-------T-T-ATATCA---TAC-AA-G--TTAAA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8266 21 -     39403 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43217 21 +     87928 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8265 21 -     60166 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15202 21 -     67232 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43118 21 -     90634 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44585 21 +     89403 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178492 21 - 189387572 T--A-------T-T-ACATCA---TTT-GA-G--TTAAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193309 21 -   9816681 T--A-------T-T-ACATCA---TTT-GA-G--TTAAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28452 21 +     69807 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45633 21 -     80239 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 3964 21 +      7663 T--A-------G-A-CCTTTA---GGC-AA-A--TAAAA
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983209 21 +   4620579 T--A-------T-T-ACATCG---TGC-GA-G--TTAAA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566719 21 -   2598838 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4357 21 -      7103 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4954 21 -     11706 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8692 21 -     30655 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35005 21 +     46564 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95284 21 -     98465 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8923 21 +     35169 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38044 13 +     52041 T--A-------T-T-GTATCA---TGC------------
i Psammomys_obesus.NESX01036366.1                        C 0 I 2
s Pteronotus_parnellii.KE847780.1                            52762 14 -     66298 T--A-------T-T-ACATCA---TAC-A----------
i Pteronotus_parnellii.KE847780.1                        C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5265 21 -     18639 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841351 21 -  28871421 T--A-------T-T-ACATTA---TAT-GA-A--TTAAA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537866 21 -   4952924 T--A-------T-T-ACATTA---TAT-GA-A--TTAAA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099726 15 +  38429054 T--G-------T-T-ACATCA---TAC-GG---------
i Puma_concolor.QAVW01001104.1                           C 0 I 5
s Pygathrix_cinerea.k141_1153803                             27821 21 +     91421 T--A-------T-T-ACATCA---TCT-GA-G--TTAAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154305 21 -   7812017 T--A-------T-T-ACATCA---TCT-GA-G--TTAAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8678 21 +     72585 T--A-------T-T-ACATCA---TCT-GA-G--TTAAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53797 21 +     55069 A--A-------T-G-ACATCA---TCC-AA-A--TTAAA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023328 21 -  90668790 T--A-------T-G-GTGTCA---TAC-A-TT--TTAGA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915331 21 +   3329780 t--a-------t-t-acatca---tat-gA-A--TTAAA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2406 21 +      7119 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123022 21 + 195417433 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237248 21 -   7961872 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75850 21 -    116970 T--A-------T-T-ACATTA---TAT-GA-A--TTAAA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4577 21 +     27962 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4471 21 +      6077 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4561 21 +      5971 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4482 21 +      5932 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2824 21 -      4390 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392261 21 - 209938924 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4430 21 +      5979 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1000 21 -     22275 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8472 21 +     16473 T--A-------T-G-ACATCA---TCC-AA-A--TTAAA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109597 21 + 121099817 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31164 21 -     47369 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31550 21 -     79414 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28241 21 -     34454 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15642 21 -     22428 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30796 21 -     47109 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238842 21 +   5703754 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8432 21 +     21866 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116494 20 +    313613 T--A-------T-T-CCACTA---TAT-GA-A--TT-AC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26147 21 +     27374 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29659 21 +     58920 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16157 21 -     45317 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23815 21 -     42441 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26493 21 -     29113 T--A-------T-T-ACATCC---TAT-GA-G--TTAAA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29568 21 -     48123 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49823 21 +     77746 T--A-------T-T-GCACCA---TGC-AA-T--TTAAA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864767 21 -   1910179 T--A-------T-T-ACATCG---TTT-GA-A--GTAAA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671878 17 +  18376816 T--A-------T-T-ACA------TAT-GA-A--TT-AA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1868982 21 +   3870691 T--G-------T-T-ACATCA---TGC-AA-G--TTAAA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7355 19 -     97271 -----------T-T-ACATCA---TAT-GA-A--TTAAG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125494 21 +    196729 T--A-------T-T-ACATCA---TAT-GG-A--TTAAA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644379 21 +  69701581 T--A-------T-G-ACATTA---TCT-GA-A--TTAAA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391748 21 +   1523678 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14928 14 +     22964 T--C-------T-T-ACGTCA---TAT-A----------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 4
s Tamandua_tetradactyla.TamTet_scaffold_224794                3357 21 +      5583 T--G-------T-T-GCATCA---TGT-GC-A--TTAGA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192231 23 +    199430 TATA-------T-G-ACATCA---TAC-AA-A--TTAAA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106201 21 -    539355 T--A-------T-G-ACATCA---TAC-AA-A--TTAAA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1267 21 +      9917 T--A-------T-T-ACATCA---TAT-AA-G--TTAGA
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8065 21 +     20590 T--A-------T-T-ACATCA---TAT-AA-G--TTAGA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354000 21 - 186847797 T--G-------T-T-ACATCA---TAT-GA-G--TTAAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24693 21 -     33621 T--A-------T-C-ACATCA---AAT-AA-T--TTAAG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20342 21 -     31044 T--G-------T-G-GCATCA---TGC-GA-A--TTAAA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480755 14 -    610378 T--G-------T-T-ACATCA---TAC-G----------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 4
s Trachypithecus_auratus.k141_1189070                        21692 21 +     26378 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34368 21 -     78344 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21017 21 +     25722 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29324 21 -     62838 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29368 21 +     46913 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10177 21 -     28527 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31259 21 -     64340 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29297 21 -     63452 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10744 21 +     22490 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4167 21 -      6147 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11080 21 -     13050 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256310 21 -   6242583 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2338 21 +     19340 T--A-------T-T-ACATCA---TAT-GA-G--TTAAA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174086 21 -    200418 T--A-------T-G-ACATCA---TCC-AA-A--TTCAA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6481513 21 -  10818551 T--A-------T-A-ACTTCA---TGC-AA-A--TTAAA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1834989 21 -   4065304 T--A-------T-T-GCAGCA---GAT-GA-G--TTAAG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9009 21 -     70247 T--A-------T-T-ACAGCA---GAT-GA-G--TTAAG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366332 21 -  33153633 T--A-------T-G-ACATCA---TCT-GA-A--TTAAA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4221 20 -     21056 C--A-------T-C-CCCTTA---TAT-GA-A--TT-TA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182655 21 +   5085361 t--a-------t-t-aCATCA---TAT-GA-A--TTAAA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25861 21 -     30710 T--A-------T-T-ACATCA---TGT-GA-G--TTAAA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24768 21 -    147434 T--A-------T-T-ACATCA---TGT-GA-G--TTAAA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76913 20 +   5488506 T--A-------T-G-ATATCA---TC--GA-A--TTAAA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105580 21 -    112863 T--A-------T-T-ACATCA---TAC-AA-G--TTAAA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174774 21 -    224448 T--G-------T-T-ACTTCA---CTC-GA-G--TTAAA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29688 21 -     86975 T--A-------T-T-ATGTCA---TAT-GA-A--TTAAA
i Zalophus_californianus.ZalCal_flattened_line_17732     I 211 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       581 21 -      1899 C--T-------T-T-ACATCA---TGC-AA-C--TTAAA
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1616 21 +      2126 T--A-------T-G-ACATCA---TCT-GA-A--TTAAA
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6059 6 +     36723 CACTCT
s Acinonyx_jubatus.LLWD01001279.1                           813488 6 +   1699592 CACATT
i Acinonyx_jubatus.LLWD01001279.1                        I 5 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25730 6 +     63021 CACATT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415940 6 +  29979442 caCATT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216285 6 +    347723 caCATT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18637 6 -     61208 CACATT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48704 6 +     53615 CACTCT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           735 6 +     13857 CACTCT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17286 6 -     21945 CACTCT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18971 6 +     32033 CACTCT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72805 6 -     84148 CACTCC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45044 6 -     78289 CACTCC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44483 6 +     55831 CACTCC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42933 6 -     64179 CACTCC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24567 6 -     24835 CACTCC
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41558 6 +     45454 CACTTC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47207 6 +     70886 CACTCC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9380 6 +     30854 CACTCC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33514 6 +     42133 CACTCC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585938 6 +   2318259 CACATT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177736 6 -    412891 CACATT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51045 6 -     68529 CACATT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1771 6 +     17741 CACTCT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2396 6 -     15923 CACTCT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672678 6 +   5030052 CACTCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2672 6 -     16391 CACTCT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2231 6 -     17186 CACTCT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16750 6 -     32367 CACACT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20843 6 -     45910 TGCTTT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6002 6 -     15198 CACATT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 4 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275268 6 +  21539123 CACTCT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11436 6 +     48076 CACTCT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6571 6 -     28759 CACTCT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34125 6 +     44353 CACTCT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49496 6 -     71267 CACTCT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23554 6 -     33135 CACTCT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6845 6 +     11645 CACTTT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6853 6 -     19611 CACTTT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964089 6 -  23207421 CACATT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          589 6 -     25979 CACATT
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86946 6 +    124022 CACATT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22488 6 +    288883 CACACT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356878 6 +  48749331 CACACT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755442 6 +   1948126 CACACT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545584 6 -  45695690 CACACT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530599 6 -   4408762 CACACT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8444 6 +     28062 CACTCT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43738 6 -     91139 CACTCT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21264 6 +     95584 CACTCT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21177 6 +    119600 CACTCT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10751 6 +     18648 CACTCT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10286 6 -     13885 CACTCT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2356 6 -      8861 CACTCT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454748 6 + 189096842 CACTCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2271 6 +      8664 CACTCT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631601 6 +  17673402 CACATT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665888 6 +   7040546 CACATT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209547 6 +   1652518 CACATT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505970 6 +  60362399 CACATT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9606 6 -     23171 CACATT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222949 6 +   9314153 CACATT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616084 6 +  59632846 CACATT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107665 6 -  63665305 CACATT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409667 6 -  46296322 CACATT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591941 6 +  44709034 CACATT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    116 6 -      1607 AACATT
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271056 6 +    496798 CACTTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                858 6 +      9923 CACATT
i Carollia_perspicillata.CarPer_scaffold_107871          I 4 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28258 5 -     39886 CACAT-
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80143 6 -    217609 CACGTT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996986 6 +  23392119 TACATT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000427 6 +  23407841 tacATT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63508 6 -     66877 TACATT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5669 6 -     12580 CACTCT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43726 6 +     53515 CACTCT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373489 6 -  26074798 CACTCT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8543 6 -     34880 CACTCT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67639 6 -     89041 CACTCT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3016 6 -      5494 CACTTT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492775 6 -  27778364 CACATT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19608 6 +     27315 CACATT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141853 6 -   4669795 CACTCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45597 6 +     47900 CACTCT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1025 6 -     14410 CACTCT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45409 6 -    148725 CACTCT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27618 6 -     40656 CACTCT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7582 6 +     20796 CAGTCT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12700 6 -     17524 CACTCT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28423 6 -     34525 CACTCT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12203 6 -     25376 CACTCT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364790 6 -  39242232 CACTCT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270517 6 +  21565898 CACTCT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32885 6 -     45857 CACTCT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27786 6 -     32606 CACTCT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3948 6 +      8499 CACTCT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26344 6 +     70610 CACTCT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23305 6 +     36323 CACTCT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13284 6 -     19938 CACATT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31219 6 -     33796 CACTTT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5733 6 -     15404 CACTTT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9544 6 -     32913 CACCCT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19957 6 -     40346 CACCCT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20212 6 +    216457 CACCCT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20005 6 +     39636 CACCCT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239351 6 -   2543920 CACATT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4600 6 +      5346 CACTCT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43075 6 -    112038 CACTCT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8626 6 +     34062 CACTGT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344206 6 +  18827391 CACTCT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10750 6 -     44032 CACTCT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305531 6 - 135778131 CACTCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15415 6 +     15858 CACAAT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606990 6 -    839153 CACAAT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2105 6 +      2406 CATATT
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409936 6 -   2368649 CACTCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379817 6 - 200372422 CACTCT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3374 6 -     84244 CACTCT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807810 1 +  53390261 C-----
i Condylura_cristata.JH655891.1                          C 0 I 31
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3369 6 -      8242 CACATT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115445 6 - 224834208 CACATT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9963 6 +     12657 TATGTT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4942 6 +     87169 CACATT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    645996 5 -   1526836 CACAT-
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18904 6 +     50838 AGCATT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4912 6 +     36344 CACATT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28688 6 +     75252 CATATT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110640 2 -   2246927 CA----
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293155 6 +  12879189 CACTTT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632497 6 -  35494412 CACATT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              331053 6 -   2620052 CACATT
i Desmodus_rotundus.KZ672366.1                           I 4 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665059 6 -   1390856 CACGTT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139852 6 -    198055 CACATT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99436 6 -    115145 CACATT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951157 6 -  37912305 TTTATT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6083 6 -     10735 TTTATT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856131 6 - 111700974 CACAGT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6832 6 +     19438 CACATT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240308 6 -    607251 CACATT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226331 6 +  10337057 CACATT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31587 6 +    110024 CACATT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13558 6 +     18970 CACATT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916691 6 +  41312741 CACATT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579476 6 +  14770903 CACATT
i Eptesicus_fuscus.JH977646.1                            I 5 C 0
s Equus_asinus.JREZ01000139.1                              3041973 6 -   4378816 CACGTT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375911 6 +  39960074 CACGTT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411818 6 -    498745 CACGTT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666617 6 +   7059049 aATATT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263742 6 +  21539334 CACTCT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71703 6 -    133382 CACATT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_705718              279 6 +       377 CACATT
i Eubalaena_japonica.EubJap_flattened_line_705718        C 0 C 0
s Eulemur_albifrons.k141_51491                               15360 6 -     24895 CACTTT
i Eulemur_albifrons.k141_51491                           I 5 C 0
s Eulemur_collaris.k141_601111                               43070 6 -     70999 CACTTT
i Eulemur_collaris.k141_601111                           I 5 C 0
s Eulemur_coronatus.k141_384460                              87040 6 +    112731 CACTTT
i Eulemur_coronatus.k141_384460                          I 5 C 0
s Eulemur_flavifrons.k141_433119                             43602 6 +     68309 CACTTT
i Eulemur_flavifrons.k141_433119                         I 5 C 0
s Eulemur_fulvus.k141_636316                                 53927 6 -     65740 CACTTT
i Eulemur_fulvus.k141_636316                             I 5 C 0
s Eulemur_macaco.k141_1562045                                24559 6 -     75513 CACTTT
i Eulemur_macaco.k141_1562045                            I 5 C 0
s Eulemur_mongoz.k141_232305                                 48754 6 -     97555 CACTTT
i Eulemur_mongoz.k141_232305                             I 5 C 0
s Eulemur_rubriventer.k141_1423786                            5478 6 +     30972 CACTTT
i Eulemur_rubriventer.k141_1423786                       I 5 C 0
s Eulemur_rufus.k141_514691                                  43198 6 -     52037 CACTTT
i Eulemur_rufus.k141_514691                              I 5 C 0
s Eulemur_sanfordi.k141_1122526                              59601 6 -    111500 CACTTT
i Eulemur_sanfordi.k141_1122526                          I 5 C 0
s Felis_catus.CM001381.2                                 186247397 6 - 206538554 CACATT
i Felis_catus.CM001381.2                                 I 5 C 0
s Felis_catus_fca126.CM031415.1                          185117183 6 - 205367284 CACATT
i Felis_catus_fca126.CM031415.1                          I 5 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28281 6 -     30238 CACATT
i Felis_nigripes.FelNig_flattened_line_31944             I 6 C 0
s Fukomys_damarensis.KN121974.1                            2916993 6 -   3816255 aatatt
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126211 6 -    137831 TGCTTT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9756 6 +     22493 TGCTTT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21826 6 -     32986 CGCTTT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1730 6 -     28519 TACATG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92011 6 -     95226 CACATT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            35046 6 -     36801 CACATT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6359 6 -      8343 TACTCT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255374 6 - 186649187 CACTCT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2528 6 -     78134 CACATT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15289 6 -     40692 CATTTT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36691 6 +     49394 CATTTT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61559 6 -     66874 CATTTT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10433 6 -     42923 CATTTT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17432 6 -     53142 CACTTT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31374 6 -    327341 caCATT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9685 6 +     48891 CACATT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932970 6 -  22651954 CATATT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154059                4083 6 +      4291 CACATT
i Heterohyrax_brucei.HetBruBak_scaffold_154059           C 0 N 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8198 6 -     36432 CACATT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552190 6 -   1711038 CATGTT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1628 6 -      2730 CATGTT
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143383 6 -    630532 CACACT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70539 6 +     83186 TGCATT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72432 6 +    143317 CACATT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6417 6 +     12352 CACACT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13601 6 +     55766 CACACT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053201 6 + 191637585 CACACT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802079 6 +  11177569 CACACT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7719 6 -    135385 AACATT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387425 6 +   7955117 CACATT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2989 6 +     11955 CACTTT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10598 6 -     16823 CACATT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240416 6 +   9596543 CACATT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72438 6 -     97402 CACATT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43819 6 +    110728 GACTCT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    32732 6 -     49555 CACATT
i Lasiurus_borealis.LasBor_scaffold_26245                I 76 I 57
s Lemur_catta.scaffold_24                                 14760082 6 +  30322482 CACTCT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4724 6 -     13097 CACTCT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4478 6 +      5940 CACTCT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4301 6 -      5717 CACTCT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10691 6 -     11567 CACTCT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12072 6 -     12945 CACTCT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9594 6 +     29618 CACTTT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9590 6 +     31569 CACTTT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9600 6 +     24756 CACTTT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9600 6 +     16388 CACTTT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814073 6 -   3914936 CACATT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18442 6 +     24238 CATGCT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341783 6 +    662738 CACATT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334738 6 -   1826925 CACTCT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11909 6 +     19643 CACTTT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045579 6 -   6120653 CACTTT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39084768 6 +  43346337 CACATT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615239 6 +  59628241 CACATT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46127 6 -     61512 CACTCT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373789 6 -  60120075 CACTCT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26057 6 +     30207 CACTCT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             895 6 -      5035 CACTCT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26010 6 +     30527 CACTCT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37186 6 -     50087 CACTCT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46930 6 +     51645 CACTCT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416133 6 - 187317192 CACTCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400363 6 +  25927173 CACTCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49535 6 -     62418 CACTCT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2066 6 +     14901 CACTCT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46007 6 +     59329 CACTCT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271915 6 +    668171 CACTCT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   553 6 -      5049 CACTCT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3713 6 +     17132 CACTCT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223799 6 -    270270 CACATT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323203 6 +  24302211 CACTCT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358034 6 -    752769 CACTCT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674126 6 -    737560 CACATT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221422 6 +    317179 CACATT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501643 6 +  40650429 CACATT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150968 6 +    207569 CACATT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26790 6 -     74585 CACATT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50758 6 -    140813 CACATT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 2 C 0
s Mesocricetus_auratus.KB708134.1                         17429825 6 +  29670104 CACAGT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88067 6 +     93471 CACATT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10858 6 +     17804 CACTCT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11358 6 -     12984 CACTCT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19674 6 -     26561 CACTCT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985432 6 +  93316391 CACTTT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47366 6 +    145209 CACGTT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185655 6 +    200668 CACATT
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 4 C 0
s Microtus_ochrogaster.CM001695.1                         15963032 6 +  27267610 CACATT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363811 6 -   8254450 CACATT
i Miniopterus_natalensis.LDJU01000034.1                  I 4 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42718 6 -     48117 CACATT
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 4 C 0
s Miopithecus_ogouensis.k141_1534655                         23237 6 -     27822 CACTCT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9084 6 +     27589 CACATT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53215 6 -     62432 CACTTT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360172 6 +    437263 CACATT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179887 6 +    366855 CACGTT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26133 6 -     82753 CACATT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19099 6 -     63510 CACATT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39779 6 +     47283 CACATT
i Murina_feae.MurFea_scaffold_17764                      I 4 C 0
s Mus_caroli.LT608237.1                                   35593743 6 + 120012414 CATATT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688132 6 + 129401213 CACATT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497426 6 + 130317789 CACATT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84084 6 -     86153 CACATT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355712 6 +  14710649 CACATT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63687 6 +     67721 AACACT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794035 6 +  10118263 CACATT
i Myotis_brandtii.KE162005.1                             I 4 C 0
s Myotis_davidii.KB100139.1                                4388208 6 +   6019432 CACATT
i Myotis_davidii.KB100139.1                              I 4 C 0
s Myotis_lucifugus.GL429869.1                               383996 6 +   4330536 CACATT
i Myotis_lucifugus.GL429869.1                            I 4 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3029 6 +     18357 CACATT
i Myotis_myotis.MyoMyo_scaffold_66571                    I 4 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120387 6 +    130748 CATATT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947313 6 +   3037898 CACACT
i Nannospalax_galili.KL204047.1                          I 412 C 0
s Nasalis_larvatus.k141_1350636                              29893 6 +     34575 CACTCT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232838 6 -   7148211 CGCATT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128852 6 -    149072 CACATT
i Noctilio_leporinus.NocLep_scaffold_7894                I 4 C 0
s Nomascus_annamensis.k141_1771965                           54309 6 -    132029 CACACT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10404 6 -     16345 CACACT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16289 6 +     22201 CACACT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414510 6 -  22158432 CACACT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26687 6 -     54323 CACACT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198835 6 +   9404916 CACATT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638808 6 + 196305487 CAGTTT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1411 6 -      9413 CAGTTT
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566191 6 - 199412804 CAGTTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557499 6 -   3988456 CACATT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055643 6 -  11899542 AGCATT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452501 6 +   2017862 CACATT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436901 6 -    630418 CACATT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15095 6 +    150152 CACATT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93384 6 -    140218 CACATT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4253 6 -     41509 CAGATT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103240 6 +  10937097 CACATT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                286 6 +     11607 CACATT
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104236 6 - 174332312 CATGCT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39880 6 +    559221 CACATT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41359 6 -     51505 CGCTTT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354362 6 +   1103335 CGCTTT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404805 6 -  44047080 CACATT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5324 6 +     17875 CACATT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473403 6 - 189151597 CACTCT
i Pan_troglodytes.CM009242.2                             I 21 I 16
s Panthera_onca.PanOnc_flattened_line_3271                   25104 6 -    230217 CACATT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462430 6 -  18783137 CACATT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973089 6 +   8748460 CACATT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616333 6 +   2937107 CACATT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244035 6 - 183742232 CACTCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10497 6 +     21308 CACTCT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293070 6 -  20919399 CACTCT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23145 6 -     27687 CACTCT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16291 6 +     16796 CACTCT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23102 6 -     23640 CACTCT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15702 6 +     78924 CACATT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27689 6 +     31479 TGCTTT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20057 6 -     24908 TGCTTT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2515 6 +      9367 CTTACT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247463 6 +  18517816 CACATT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32536 6 -     56120 CACATT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4766 6 -     63832 CGCATT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3324 6 +     55023 CACTCT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2862 6 -     89929 CACTCT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3452 6 +     40849 CACTCT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255127 6 +  14605196 CACTCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4625 6 +     22231 CACAAT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 5 C 0
s Pithecia_albicans.k141_1239476                             65442 6 +    207309 CACTCT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6534 6 -     25401 CACTCT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32278 6 +     58159 CACTCT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32554 6 +     63561 CACTCT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32314 6 +     51148 CACTCT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557284 6 -   4542175 CACTCT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32298 6 +     51125 CACTCT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1783 6 +     19503 CACATT
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8709 6 +     39866 CACTCT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3791 6 -      9282 CACTCT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43195 6 -     87950 CACTCT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43591 6 -     88961 CACTCT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8287 6 -     39403 CACTCT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43238 6 +     87928 CACTCT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8286 6 -     60166 CACTCT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15223 6 -     67232 CACTCT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43139 6 -     90634 CACTCT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44606 6 +     89403 CACTCT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178513 6 - 189387572 CACTCT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193330 6 -   9816681 CACTCT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28473 6 +     69807 CACTCT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45654 6 -     80239 CACTCT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 3985 6 +      7663 CACATT
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983230 6 +   4620579 CACTTT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566740 6 -   2598838 CACTTT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4378 6 -      7103 CACTTT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4975 6 -     11706 CACTTT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8713 6 -     30655 CACTTT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35026 6 +     46564 CACTTT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95305 6 -     98465 CACTTT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8944 6 +     35169 CACTTT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38059 6 +     52041 CACATT
i Psammomys_obesus.NESX01036366.1                        I 2 C 0
s Pteronotus_parnellii.KE847780.1                            52780 6 -     66298 CACATT
i Pteronotus_parnellii.KE847780.1                        I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5286 6 -     18639 CACATT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841372 6 -  28871421 CACATT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537887 6 -   4952924 CACATT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099746 6 +  38429054 CACATT
i Puma_concolor.QAVW01001104.1                           I 5 C 0
s Pygathrix_cinerea.k141_1153803                             27842 6 +     91421 CACTCT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154326 6 -   7812017 CACTCT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8699 6 +     72585 CACTCT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53818 6 +     55069 CACATT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023349 6 -  90668790 TACATT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915352 6 +   3329780 CACATT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2427 6 +      7119 CACTCT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123043 6 + 195417433 CACTCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237269 6 -   7961872 CACTCT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75871 6 -    116970 CACATT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4598 6 +     27962 CACTCT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4492 6 +      6077 CACTCT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4582 6 +      5971 CACTCT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4503 6 +      5932 CACTCT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2845 6 -      4390 CACTCT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392282 6 - 209938924 CACTCT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4451 6 +      5979 CACTCT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1021 6 -     22275 CACTCT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8493 6 +     16473 CACATT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109618 6 + 121099817 CAGTCT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31185 6 -     47369 CAGTCT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31571 6 -     79414 CAGTCT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28262 6 -     34454 CAGTCT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15663 6 -     22428 CAGTCT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30817 6 -     47109 CAGTCT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238863 6 +   5703754 CACTCT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8453 6 +     21866 CACTCT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116514 6 +    313613 CACATG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26168 6 +     27374 CACTCT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29680 6 +     58920 CACTCT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16178 6 -     45317 CACTCT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23836 6 -     42441 CACTCT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26514 6 -     29113 CACTCT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29589 6 -     48123 CACTCT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49844 6 +     77746 CAGATT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864788 6 -   1910179 CACATT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671895 6 +  18376816 CATGCT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869003 6 +   3870691 CACATT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7374 6 -     97271 CACATT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125515 6 +    196729 CACATT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644400 6 +  69701581 cacatt
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391769 6 +   1523678 CACACT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14946 6 +     22964 CACATT
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 4 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3378 6 +      5583 CATATT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192254 5 +    199430 CACGT-
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106222 6 -    539355 CACGTT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1288 6 +      9917 CATGTT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8086 6 +     20590 CATGTT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354021 6 - 186847797 CACTCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24714 6 -     33621 CACATT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20363 6 -     31044 CACATT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480773 6 -    610378 CACATT
i Tonatia_saurophila.TonSau_scaffold_294                 I 4 C 0
s Trachypithecus_auratus.k141_1189070                        21713 6 +     26378 CACTCT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34389 6 -     78344 CACTCT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21038 6 +     25722 CACTCT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29345 6 -     62838 CACTCT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29389 6 +     46913 CACTCT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10198 6 -     28527 CACTCT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31280 6 -     64340 CACTCT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29318 6 -     63452 CACTCT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10765 6 +     22490 CACTCT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4188 6 -      6147 CACTCT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11101 6 -     13050 CACTCT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256331 6 -   6242583 CACTCT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2359 6 +     19340 CACTCT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174107 6 -    200418 CACATT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6481534 4 -  10818551 CACA--
i Trichechus_manatus.JH594705.1                          C 0 I 220
s Tupaia_chinensis.KB320699.1                              1835010 6 -   4065304 CACATT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9030 6 -     70247 CACATT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366353 6 -  33153633 CACATT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4241 6 -     21056 CACATA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182676 6 +   5085361 CACATT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25882 6 -     30710 CACTTT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24789 6 -    147434 CACTTT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76933 6 +   5488506 CACATT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105601 6 -    112863 CACATT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174795 6 -    224448 CACATT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29709 6 -     86975 CACATT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       602 6 -      1899 CACATT
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1637 6 +      2126 CACATT
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 44857 0 -     83289 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6065 16 +     36723 TGCC--AAGAATTATCAG
s Acinonyx_jubatus.LLWD01001279.1                           813494 16 +   1699592 TGCT--AAGAATTATCAG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25736 16 +     63021 TGTC--AAGAATTATGAG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415946 16 +  29979442 CACT--AAGAATTATCAG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216291 16 +    347723 TGCT--AAGAATTATCAG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18643 16 -     61208 TGCT--AAGAATTATGCA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48710 16 +     53615 TGCC--AAGAATTATCAG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           741 16 +     13857 TGCC--AAGAATTATCAG
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17292 16 -     21945 TGCC--AAGAATTATCAG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18977 16 +     32033 TGCC--AAGAATTATCAG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72811 16 -     84148 TGCC--AAGAATGATCAG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45050 16 -     78289 TGCC--AAGAATGATCAG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44489 16 +     55831 TGCC--AAGAATGATCAG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42939 16 -     64179 TGCC--AAGAATGATCAG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24573 16 -     24835 TGCC--AAGAATGATCAG
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41564 16 +     45454 TGCC--AAGAATGATCAG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47213 16 +     70886 TGCC--AAGAATGATCAG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9386 16 +     30854 TGCC--AAGAATGATCAG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33520 16 +     42133 TGCC--AAGAATGATCAG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585944 16 +   2318259 TGCT--AAGAATTATGAG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177742 16 -    412891 TGCT--AAGAATTACCAG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51051 16 -     68529 TGCT--AAGAATTATGAG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1777 16 +     17741 TGCC--AAGAATTATCAG
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2402 16 -     15923 TGCC--AAGAATTATCAG
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672684 16 +   5030052 TGCC--AAGAATTATCAG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2678 16 -     16391 TGCC--AAGAATTATCAG
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2237 16 -     17186 TGCC--AAGAATTATCAG
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16756 16 -     32367 TACT--AGGAATTATCAG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20849 16 -     45910 TCCT--TAGAATTATCTG
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6008 16 -     15198 TGCT--GAGAATTACCAG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275274 16 +  21539123 TGCC--AAGAATGATCAG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11442 16 +     48076 TGCC--AAGAATGATCAG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6577 16 -     28759 TGCC--AAGAATGATCAG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34131 16 +     44353 TGCC--AAGAATGATCAG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49502 16 -     71267 TGCC--AAGAATGATCAG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23560 16 -     33135 TGCC--AAGAATGATCAG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6851 16 +     11645 TACT--AGGAATTATCAG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6859 16 -     19611 TACT--AGGAATTATCAG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964095 16 -  23207421 TGCT--AAGAATTATCAA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          595 16 -     25979 TGCT--AAGAATTATCAA
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86952 16 +    124022 TGCT--AAAAATTATGAG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22494 16 +    288883 TGCT--AAGAATTATGAG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356884 16 +  48749331 TGCT--AAGAATTATGAG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755448 16 +   1948126 TGCT--AAGAATTATGAG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545590 16 -  45695690 TGCT--AAGAATTATGAG
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530605 16 -   4408762 TGCT--AAGAATTATGAG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8450 16 +     28062 TGCC--AAGAATTATCAG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43744 16 -     91139 TGCC--AAGAATTATCAG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21270 16 +     95584 TGCC--AAGAATTATCAG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21183 16 +    119600 TGCC--AAGAATTATCAG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10757 16 +     18648 CGCC--AAGAATTATCAG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10292 16 -     13885 CGCC--AAGAATTATCAG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2362 16 -      8861 TGCC--AAGAATTATCAG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454754 16 + 189096842 TGCC--AAGAATTATCAG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2277 16 +      8664 TGCC--AAGAATTATCAG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631607 16 +  17673402 TGCT--AAGAATTATCAG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665894 16 +   7040546 TGCT--AAGAATTATCAG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209553 16 +   1652518 TGCT--AAGAATTATCAG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505976 16 +  60362399 TGCT--AAGAATTATCAG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9612 16 -     23171 TGCT--AAGAATTATCAG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222955 16 +   9314153 TGCT--AAGAATTATCAG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616090 16 +  59632846 TGCT--AAGAATTATCAG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107671 16 -  63665305 TGCT--AAGAATTATCAG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409673 16 -  46296322 TGCT--AAGAATTATGAA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591947 16 +  44709034 TGCT--AAGAATTATGAG
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    122 16 -      1607 TGCT--AAAAATTTTCTG
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271062 16 +    496798 TGCC--AAGAAGTATCAG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                864 16 +      9923 TGCT--AAGAATTACCAG
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28263 16 -     39886 TACT--AAGAATTATCGG
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80149 16 -    217609 TGTT--AAAAATTATCAG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4996992 16 +  23392119 TGCT--AAAAAGTATCAG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000433 16 +  23407841 TGCT--AAAAAGTATCAG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63514 16 -     66877 TGCT--AAAAAGTATCAG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5675 16 -     12580 TGCC--AAGAATTATCAG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43732 16 +     53515 TGCC--AAGAATTATCAG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373495 16 -  26074798 TGCC--AAGAATTATCAG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8549 16 -     34880 TGCC--AAGAATTATCAG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67645 16 -     89041 TGCC--AAGAATTATCAG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3022 16 -      5494 TGCC--AAGAAGTATCAG
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492781 12 -  27778364 TGCT--AAGAATTA----
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19614 12 +     27315 TGCT--AAGAATTA----
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141859 16 -   4669795 TGCC--AAGAATTATCAG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45603 16 +     47900 TGCC--AAGAATTATCAG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1031 16 -     14410 TGCC--AAGAATTATCAG
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45415 16 -    148725 TGCC--AAGAATTATCAG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27624 16 -     40656 TGCC--AAGAATTATCAG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7588 16 +     20796 TGCC--AAGAATTATCAG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12706 16 -     17524 TGCC--AAGAATTATCAG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28429 16 -     34525 TGCC--AAGAATTATCAG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12209 16 -     25376 TGCC--AAGAATTATCAG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364796 16 -  39242232 TGCC--AAGAATTATCAG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270523 16 +  21565898 TGCC--AAGAATTATCAG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32891 16 -     45857 TGCC--AAGAATTATCAG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27792 16 -     32606 TGCC--AAGAATTATCAG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3954 16 +      8499 TGCC--AAGAATTATCAG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26350 16 +     70610 TGCC--AAGAATTATCAG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23311 16 +     36323 TGCC--AAGAATTATCAG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13290 16 -     19938 TGCT--AAGAATGATCAG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31225 16 -     33796 TACT--AGGAATTATCAG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5739 16 -     15404 TACT--AGGAATTATCAG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9550 16 -     32913 TGCC--AAAAATTATCAG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19963 16 -     40346 TGCC--AAAAATTATCAG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20218 16 +    216457 TGCC--AAAAATTATCAG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20011 16 +     39636 TGCC--AAAAATTATCAG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239357 16 -   2543920 TGCT--AAAAATTATCAG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4606 16 +      5346 TGCC--AAGAATTATCAG
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43081 16 -    112038 TGCC--AAGAATTATCAG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8632 16 +     34062 TGCC--AAGAATTATCAG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344212 16 +  18827391 TGCC--AAGAATTATCAG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10756 16 -     44032 TGCC--AAGAATTATCAG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305537 16 - 135778131 TGCC--AAGAATTATCAG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15421 16 +     15858 TGCT--GGGAATTATCAG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            606996 16 -    839153 TGCT--GGGAATTATCAG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2111 16 +      2406 TGTT--GAGAATCATCAG
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409942 16 -   2368649 TGCC--AAGAATTATCAG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379823 16 - 200372422 TGCC--AAGAATTATCAG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3380 16 -     84244 TGCC--AAGAATTATCAG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807842 16 +  53390261 TATG--AACAATTATCAG
i Condylura_cristata.JH655891.1                          I 31 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3375 16 -      8242 TGCT--TAGAATTATCAG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115451 16 - 224834208 TGTC--AAGGATTATGAG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9969 16 +     12657 TTCT--AAGAATTATTGG
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4948 16 +     87169 TGCT--AAGAATTACCAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646001 16 -   1526836 TGTT--GAGAGTTATCAG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18910 16 +     50838 TGCT--AAAAATTTTCTG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4918 16 +     36344 TGCT--AAAAATGATCAG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28694 16 +     75252 TGCT--AAAAATTATCGG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110642 15 -   2246927 -GCT--GAGAATCATCAG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293161 16 +  12879189 TAAT--AGGGATTATTAG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632503 16 -  35494412 TGCT--AAGAATTATCAG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              331059 16 -   2620052 TGCT--AAGAATTACCAG
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665065 12 -   1390856 TGGT--AAGAATTA----
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139858 12 -    198055 TGCT--AAGAATTA----
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99442 16 -    115145 TGCT--AAAAATTATCAG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951163 16 -  37912305 TGCT--AAGAATTATCAG
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6089 16 -     10735 TGCT--AAGAATTATCAG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856137 16 - 111700974 TGCT--GAGAATCATCAG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6838 16 +     19438 TGCT--AAGTATTATCAG
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240314 16 -    607251 TGCT--AAGAATTATGAG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226337 16 +  10337057 TGTT--GAGAATTATCAG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31593 16 +    110024 TGTC--AAGAATTATGAG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13564 16 +     18970 TGTC--AAGAATTATGAG
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916697 16 +  41312741 TTCT--AAGAATTATCAG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579482 16 +  14770903 TGCT--GAGAATTAAAGG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041979 16 -   4378816 TGCT--AAGAATTATTGG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375917 16 +  39960074 TGCT--AAGAATTATTAG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411824 16 -    498745 TGCT--AAGAATTATTAG
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666623 16 +   7059049 TGCT--TACAATTACTAG
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263748 16 +  21539334 TGCC--AAGAATTATCAG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71709 16 -    133382 TGCT--AAGAATTATCAA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_705718              285 16 +       377 TGCT--AAGAATTATCAA
i Eubalaena_japonica.EubJap_flattened_line_705718        C 0 C 0
s Eulemur_albifrons.k141_51491                               15366 16 -     24895 TACT--AGGAATTATCAG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43076 16 -     70999 TACT--AGGAATTATCAG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87046 16 +    112731 TACT--AGGAATTATCAG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43608 16 +     68309 TACT--AGGAATTATCAG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53933 16 -     65740 TACT--AGGAATTATCAG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24565 16 -     75513 TACT--AGGAATTATCAG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48760 16 -     97555 TACT--AGGAATTATCAG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5484 16 +     30972 TACT--AGGAATTATCAG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43204 16 -     52037 TACT--AGGAATTATCAG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59607 16 -    111500 TACT--AGGAATTATCAG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247403 16 - 206538554 TGCT--AAGAATTATCAG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117189 16 - 205367284 TGCT--AAGAATTATCAG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28287 16 -     30238 TGCT--AAGAATTATCAG
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2916999 16 -   3816255 tgct--caGAATTATCAG
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126217 16 -    137831 TCCT--AAGAGTTATCTG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9762 16 +     22493 TCCT--AAGAGTTATCTG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21832 16 -     32986 TCCT--AAGAATTATCTG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1736 16 -     28519 TGCT--AAGAATTATCAG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92017 16 -     95226 TGCT--AAGAATTATGAG
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            35052 16 -     36801 TGCT--AAGAATTAGCAG
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6365 16 -      8343 TGCC--AAGAATTATCAG
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255380 16 - 186649187 TGCC--AAGAATTATCAG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2534 16 -     78134 TGCT--TAAAATGATCAA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15295 16 -     40692 TACT--AGGAATTATCAG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36697 16 +     49394 TACT--AGGAATTATCAG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61565 16 -     66874 TACT--AGGAATTATCAG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10439 16 -     42923 TACT--AGGAATTATCAG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17438 16 -     53142 TACT--AGGAATTATTAG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31380 16 -    327341 TGCT--AAGAATTACCAA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9691 16 +     48891 TGCT--AAGAATTATGAG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932976 16 -  22651954 TGCT--AAGAATTATCAA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_154421                4067 16 -      4269 TGCT--GAGAATTTTCAG
i Heterohyrax_brucei.HetBruBak_scaffold_154421           N 0 N 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8204 16 -     36432 TGCT--AAGAATTATCAG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552196 16 -   1711038 TGCC--AAGAATAATCAG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1634 16 -      2730 TGCC--AAGAATAATCAG
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143389 16 -    630532 TGCC--AAGAGTTATCAG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70545 16 +     83186 TGTT--AAGACTTACCAA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72438 16 +    143317 TGTT--AAAAAGTATCAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6423 16 +     12352 TGCC--AAGAGTTATCAG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13607 16 +     55766 TGCC--AAGAGTTATCAG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053207 16 + 191637585 TGCC--AAGAGTTATCAG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802085 16 +  11177569 TGCC--AAGAGTTATCAG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7725 16 -    135385 TGCT--AAGAATTATCAG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387431 16 +   7955117 TACT--AGGAATTATCAG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    2995 16 +     11955 TACT--AGGAATTATCGG
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10604 16 -     16823 TGCT--AAGAATTATCAG
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240422 16 +   9596543 TGCT--GAGAATTATGCA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72444 16 -     97402 TGCT--AAGAATTATCAG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43825 16 +    110728 TGCC--AAGAATGATCAG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63463 16 -     65777 TGCT--GAGAATTAAAAG
i Lasiurus_borealis.LasBor_scaffold_16567                I 19 C 0
s Lemur_catta.scaffold_24                                 14760088 16 +  30322482 TACT--AGGAATTATCAG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4730 16 -     13097 TGCC--AAGAATTATCAG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4484 16 +      5940 TGCC--GAGAATTATCAG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4307 16 -      5717 TGCC--AAGAATTATCAG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10697 16 -     11567 TGCC--AAGAATTATCAG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12078 16 -     12945 TGCC--AAGAATTATCAG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9600 16 +     29618 TACT--AGGAATTATCAG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9596 16 +     31569 TACT--AGGAATTATCAG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9606 16 +     24756 TACT--AGGAATTATCAG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9606 16 +     16388 TACT--AGGAATTATCAG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814079 16 -   3914936 TGCT--AAGAATTATCAG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18448 16 +     24238 TGCA--AAGAGTTACCAG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341789 16 +    662738 TGCT--AAGAATTATCAG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334744 16 -   1826925 TGCC--AAGAATTATCAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11915 16 +     19643 TCCT--AAGAATTATCTG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045585 16 -   6120653 TCCT--AAGAATTATCTG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39084774 16 +  43346337 TGCT--GAGAATTATCAG
i Loxodonta_africana.GL010049.1                          C 0 I 226
s Lycaon_pictus.CM007581.1                                41615245 16 +  59628241 TGCT--AAGAATTATCAG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46133 16 -     61512 TGCC--AAGAATTATCAG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373795 16 -  60120075 TGCC--AAGAATTATCAG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26063 16 +     30207 TGCC--AAGAATTATCAG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             901 16 -      5035 TGCC--AAGAATTATCAG
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26016 16 +     30527 TGCC--AAGAATTATCAG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37192 16 -     50087 TGCC--AAGAATTATCAG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46936 16 +     51645 TGCC--AAGAATTATCAG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416139 16 - 187317192 TGCC--AAGAATTATCAG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400369 16 +  25927173 TGCC--AAGAATTATCAG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49541 16 -     62418 TGCC--AAGAATTATCAG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2072 16 +     14901 TGCC--AAGAATTATCAG
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46013 16 +     59329 TGCC--AAGGATTATCAG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271921 16 +    668171 TGCC--AAGAATTATCAG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   559 16 -      5049 TGCC--AAGAATTATCAG
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3719 16 +     17132 TGCC--AAGAATTATCAG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223805 16 -    270270 TGCT--AAGTATTATCAG
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323209 16 +  24302211 TGCC--AAGAATTATCAG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358040 16 -    752769 TGCC--AAGAATTATCAG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674132 16 -    737560 TGCT--AAGAATTATTGG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221428 16 +    317179 TGCT--AAGAATTATTGG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501649 16 +  40650429 TAAT--AGGAATTATCAG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150974 16 +    207569 TGCT--AAGGATTATCAA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26796 16 -     74585 TGCT--AAGAATTATCAA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50764 16 -    140813 TGTC--AAGAATTATGAG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429831 16 +  29670104 TGTC--AAGGATTCTGAG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88073 16 +     93471 TGCT--AAGAATTATCAG
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10864 16 +     17804 CGCC--AAGAATTATCAG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11364 16 -     12984 CGCC--AAGAATTATCAG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19680 16 -     26561 CGCC--AAGAATTATCAG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985438 16 +  93316391 TAGT--AGGATTTACCAG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47372 16 +    145209 TGCC--GACAATCAGCAG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185661 16 +    200668 TGCT--AAGAATTACCAG
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963038 16 +  27267610 TGTT--AAGAATTATAAG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363817 16 -   8254450 TACT--GAGAATTGTGAG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42724 16 -     48117 TACT--GAGAATTGTAAG
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23243 16 -     27822 TGCC--AAGAATTATCAG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9090 16 +     27589 TGCT--AAGAATTATCAG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53221 16 -     62432 TGCT--AGGAATTATCAG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360178 16 +    437263 TGCT--AAGAATTATCAG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179893 16 +    366855 TGCT--AAGAATTTTCTG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26139 16 -     82753 TGCT--AAGAATTATGAG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19105 16 -     63510 TGCT--AAGAATTACCAA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39785 16 +     47283 TGCT--GAGAATGAAAAG
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593749 16 + 120012414 TGTT--AAGAATTATGAG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688138 16 + 129401213 TGTT--AAGAATTATGAG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497432 16 + 130317789 TGTT--AAGAATTATGAG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84090 16 -     86153 TGCT--AAGAATTATCAG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355718 16 +  14710649 TGCT--AAAAATTATCAG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63693 16 +     67721 TGCT--AAAAATTTTCTG
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794041 16 +  10118263 TGCT--GAGAATTAAAAG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388214 16 +   6019432 TGCT--GAGAATTAAAAG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384002 16 +   4330536 TGCT--GAGAATTAAAAG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3035 16 +     18357 TGCT--GAGAATTAAAAG
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120393 13 +    130748 TGCT--GAGAATTAC---
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947319 16 +   3037898 TGCT--AAGAATTATGAA
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29899 16 +     34575 TGCC--AAGAATTATCAG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232844 16 -   7148211 TGCT--AAGAATTATCAG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128858 16 -    149072 TGCT--AACAATTATCAG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54315 16 -    132029 TGCC--AAGAGTTATCAG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10410 16 -     16345 TGCC--AAGAGTTATCAG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16295 16 +     22201 TGCC--AAGAGTTATCAG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414516 16 -  22158432 TGCC--AAGAGTTATCAG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26693 16 -     54323 TGCC--AAGAGTTATCAG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198841 16 +   9404916 TGCT--AAGAATTATCAG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638814 16 + 196305487 TCCT--AAGAATTATCTG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1417 16 -      9413 TCCT--AAGAATTATCTG
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566197 16 - 199412804 TCCT--AAGAATTATCTG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557505 16 -   3988456 TGCT--AAGAATTATCAG
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055649 16 -  11899542 TGCT--AAAAATTTTCCG
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452507 16 +   2017862 TGCT--AAGAATCATCAG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436907 16 -    630418 TGCT--AAGAATTATGAG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15101 16 +    150152 TGCT--AAGAATTATGAG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93390 16 -    140218 TGTC--AAGAATTATGAG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4259 16 -     41509 CGTC--GAGAATTACAAG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103246 16 +  10937097 TGCT--AAGAATTATCAG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                292 16 +     11607 TGCT--GAGAATTACCAG
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104242 16 - 174332312 TGCT--AAGAGTTATCAG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39886 16 +    559221 TGCT--AAGAATTATCAG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41365 16 -     51505 TCCT--AAAAATTATCTG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354368 16 +   1103335 TCCT--AAAAATTATCTG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404811 16 -  44047080 TGCT--AAGAATTATGAG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5330 16 +     17875 TGCT--AAGAATTATGAG
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             13057 18 -     26668 TGCCAAAAGAATTATCAG
i Pan_troglodytes.NBAG03003091.1                         I 6 I 103
s Panthera_onca.PanOnc_flattened_line_3271                   25110 16 -    230217 TGCT--AAGAATTATCAG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462436 16 -  18783137 TGCT--AAGAATTATCAG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973095 16 +   8748460 TGCT--AAGAATTATCAG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616339 16 +   2937107 TGCT--AAGAATTATGAG
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244041 16 - 183742232 TGCC--AAGAATTATCAG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10503 16 +     21308 TGCC--AAGAATTATCAA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293076 16 -  20919399 TGCC--AAGAATTATCAG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23151 16 -     27687 TGCC--AAGAATTATCAG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16297 16 +     16796 TGCC--AAGAATTATCAG
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23108 16 -     23640 TGCC--AAGAATTATCAG
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15708 16 +     78924 TGCT--AAGAATTATCAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27695 16 +     31479 TCCT--CAGAATTATCTG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20063 16 -     24908 TCCT--CAGAATTATCTG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2521 16 +      9367 TGCT--AAGAATTATCAG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247469 16 +  18517816 TGTC--AAGAATTACGAG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32542 16 -     56120 TATT--GAGCATTATCAG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4772 16 -     63832 TGCT--AAGAATTATCAG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3330 16 +     55023 TGCC--AAGAATTATCAG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2868 16 -     89929 TGCC--AAGAATTATCAG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3458 16 +     40849 TGCC--AAGAATTATCAG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255133 16 +  14605196 TGCC--AAGAATTATCAG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4631 16 +     22231 TGCT--GATAATTAAAAG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65448 16 +    207309 TGCC--AAGAATTATCAG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6540 16 -     25401 TGCC--AAGAATTATCAG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32284 16 +     58159 TGCC--AAGAATTATCAG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32560 16 +     63561 TGCC--AAGAATTATCAG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32320 16 +     51148 TGCC--AAGAATTATCAG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557290 16 -   4542175 TGCC--AAGAATTATCAG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32304 16 +     51125 TGCC--AAGAATTATCAG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1789 16 +     19503 TGTT--GAGAATTATCAG
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8715 16 +     39866 TGCC--AAGGATTATCAG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3797 16 -      9282 TGCC--AAGGATTATCAG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43201 16 -     87950 TGCC--AAGGATTATCAG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43597 16 -     88961 TGCC--AAGGATTATCAG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8293 16 -     39403 TGCC--AAGGATTATCAG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43244 16 +     87928 TGCC--AAGGATTATCAG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8292 16 -     60166 TGCC--AAGGATTATCAG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15229 16 -     67232 TGCC--AAGGATTATCAG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43145 16 -     90634 TGCC--AAGGATTATCAG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44612 16 +     89403 TGCC--AAGGATTATCAG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178519 16 - 189387572 TGCC--AAGAATTATCAG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193336 16 -   9816681 TGCC--AAGAATTATCAG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28479 16 +     69807 TGCC--AAGAATTATCAG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45660 16 -     80239 TGCC--AAGAATTATCAG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 3991 16 +      7663 TGCT--GAGAATTTTCAG
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 227
s Prolemur_simus.MPIZ01000396.1                            1983236 16 +   4620579 TACT--AGGAATTATCAG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566746 16 -   2598838 TACT--AGGAATTATCAG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4384 16 -      7103 TACT--AGGAATTATCAG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4981 16 -     11706 TACT--AGGAATTATCAG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8719 16 -     30655 TACT--AGGAATTATCAG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35032 16 +     46564 TACT--AGGAATTATCAG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95311 16 -     98465 TACT--AGGAATTATCAG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8950 16 +     35169 TACT--AGAAATTATCAG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38065 16 +     52041 TGTC--AAGAATTATGAG
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52786 16 -     66298 TGCT--AGGAATGATCAG
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5292 16 -     18639 TGCT--AAGAATTATCAG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841378 16 -  28871421 TGCT--AAGTATTATCAG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537893 16 -   4952924 TGCT--AAGTATTATCAG
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099752 16 +  38429054 TGCT--AAGAATTATCAG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27848 16 +     91421 TGCC--AAGAATTATCAG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154332 16 -   7812017 TGCC--AAGAATTATCAG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8705 16 +     72585 TGCC--AAGAATTATCAG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53824 16 +     55069 TGCT--AAGAATTATGAG
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023355 16 -  90668790 TGTT--AAGAATTATAAG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915358 16 +   3329780 TGCT--AAGAATGTTCGG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2433 16 +      7119 TGCC--AAGAATTATCAG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123049 16 + 195417433 TGCC--AAGAATTATCAG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237275 16 -   7961872 TGCC--AAGAATTATCAG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75877 16 -    116970 TGCT--AAGTATTATCAG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4604 16 +     27962 TGCC--AAGAATTATCAG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4498 16 +      6077 TGCC--AAGAATTATCAG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4588 16 +      5971 TGCC--AAGAATTATCAG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4509 16 +      5932 TGCC--AAGAATTATCAG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2851 16 -      4390 TGCC--AAGAATTATCAG
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392288 16 - 209938924 TGCC--AAGAATTATCAG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4457 16 +      5979 TGCC--AAGAATTATCAG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1027 16 -     22275 TGCC--AAGAATTATCAG
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8499 16 +     16473 TGTT--AAGAATTATGAG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109624 16 + 121099817 TGCC--AAGAATTATCAG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31191 16 -     47369 TGCC--AAGAATTATCAG
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31577 16 -     79414 TGCC--AAGAATTATCAG
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28268 16 -     34454 TGCC--AAGAATTATCAG
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15669 16 -     22428 TGCC--AAGAATTATCAG
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30823 16 -     47109 TGCC--AAGAATTATCAG
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238869 16 +   5703754 TGCC--AAGAATTATCAG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8459 16 +     21866 TGCC--AAGAATTATCAG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116520 16 +    313613 TGCT--AAGAATTACCAG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26174 16 +     27374 TGCC--AAGAATTATCAG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29686 16 +     58920 TGCC--AAGAATTATCAG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16184 16 -     45317 TGCC--AAGAATTATCAG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23842 16 -     42441 TGCC--AAGAATTATCAG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26520 16 -     29113 TGCC--AAGAATTATCAG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29595 16 -     48123 TGCC--AAGAATTATCAG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49850 16 +     77746 TGTC--AAGAATTTGGAG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864794 16 -   1910179 TGTT--CAGAATTATCAC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671901 16 +  18376816 CCCT--AAGAGTTATTAG
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869009 16 +   3870691 TACT--AGGAATTATCAG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7380 16 -     97271 TGCT--AAGAATTATCAG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125521 16 +    196729 TGCT--AAGAATTACCAA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644406 16 +  69701581 tgtt--aaaaattatcAG
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391775 16 +   1523678 TGCC--AAGAGTTATCAG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14952 16 +     22964 TGCT--TAGAATTATAAG
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3384 13 +      5583 TGCT--GAGCATCAC---
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192259 16 +    199430 TGCT--GAGAATTATCAG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106228 16 -    539355 TGCT--GAGAATTATCAG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1294 16 +      9917 TGCC--AAGAAGTATCAG
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8092 16 +     20590 TGCC--AAGAAGTATCAG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354027 16 - 186847797 TGCC--AAGAATTATCAG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24720 16 -     33621 TGCT--GAGAGTTATTAG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20369 16 -     31044 TGCT--AAGAATGATCAG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480779 16 -    610378 TGCC--AAGAATTACCAG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21719 16 +     26378 TGCC--AAGAATTATCAG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34395 16 -     78344 TGCC--AAGAATTATCAG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21044 16 +     25722 TGCC--AAGAATTATCAG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29351 16 -     62838 TGCC--AAGAATTATCAG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29395 16 +     46913 TGCC--AAGAATTATCAG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10204 16 -     28527 TGCC--AAGAATTATCAG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31286 16 -     64340 TGCC--AAGAATTATCAG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29324 16 -     63452 TGCC--AAGAATTATCAG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10771 16 +     22490 TGCC--AAGAATTATCAG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4194 16 -      6147 TGCC--AAGAATTATCAG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11107 16 -     13050 TGCC--AAGAATTATCAG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256337 16 -   6242583 TGCC--AAGAATTATCAG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2365 16 +     19340 TGCC--AAGAATTATCAG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174113 16 -    200418 TGCT--AAGAATTATGAG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835016 16 -   4065304 TGTT--ACGAATTATCAG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9036 16 -     70247 TGTT--ACGAATTATCAG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366359 16 -  33153633 TGCT--AAGAATTATCAG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4247 16 -     21056 TGCT--AAAAGTTATCAG
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182682 16 +   5085361 CACT--AAGAATTATCAG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25888 16 -     30710 TACT--AGGAATTATCAG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24795 16 -    147434 TACT--AGGAATTATCAG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76939 16 +   5488506 TGCT--AAGAATTATCAG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105607 16 -    112863 TGCT--AAGAAATATCAG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174801 15 -    224448 TGTT--AGGAATTATCA-
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29715 16 -     86975 TGCT--AAGAATTATCAG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       608 16 -      1899 TGCT--CAGAATTACAGG
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1643 16 +      2126 TGCT--AAGAATTATCAG
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Trichechus_manatus.JH594705.1                            6481538 220 -  10818551 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 44857  0 -     83289 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6081 5 +     36723 TAAC----C
s Acinonyx_jubatus.LLWD01001279.1                           813510 5 +   1699592 AAAC----C
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25752 5 +     63021 TAGT----C
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415962 5 +  29979442 TAAC----C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216307 5 +    347723 TAAC----C
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18659 5 -     61208 TAAT----C
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48726 5 +     53615 TAGC----C
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           757 5 +     13857 TAGC----C
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17308 5 -     21945 TAGC----C
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18993 5 +     32033 TAGC----C
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72827 5 -     84148 TAAC----C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45066 5 -     78289 TAAC----C
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44505 5 +     55831 TAAC----C
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42955 5 -     64179 TAAC----C
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24589 5 -     24835 TAAC----C
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41580 5 +     45454 TAAC----C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47229 5 +     70886 TAAC----C
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9402 5 +     30854 TAAT----C
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33536 5 +     42133 TAAC----C
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585960 5 +   2318259 TAAC----T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177758 5 -    412891 TGAC----T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51067 5 -     68529 TAAC----C
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1793 5 +     17741 TAAC----C
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2418 5 -     15923 TAAC----C
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672700 5 +   5030052 TAAC----C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2694 5 -     16391 TAAC----C
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2253 5 -     17186 TAAC----C
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16772 5 -     32367 TAAA----C
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20865 5 -     45910 CAAC----C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6024 5 -     15198 TGAC----C
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275290 5 +  21539123 TAAC----C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11458 5 +     48076 TAAC----C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6593 5 -     28759 TAAC----C
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34147 5 +     44353 TAAC----C
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49518 5 -     71267 TAAC----C
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23576 5 -     33135 TAAC----C
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6867 5 +     11645 TAAC----C
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6875 5 -     19611 TAAC----C
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964111 5 -  23207421 TAAC----C
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          611 5 -     25979 TAAC----C
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86968 5 +    124022 TAAC----C
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22510 5 +    288883 TAAC----C
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356900 5 +  48749331 TAAC----C
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755464 5 +   1948126 TAAC----C
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545606 5 -  45695690 TAAC----C
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530621 5 -   4408762 TAAC----C
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8466 5 +     28062 TAAC----C
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43760 5 -     91139 TAAC----C
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21286 5 +     95584 TAAC----C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21199 5 +    119600 TAAC----C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10773 5 +     18648 TAAC----C
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10308 5 -     13885 TAAC----C
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2378 5 -      8861 TAAC----C
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454770 5 + 189096842 TAAC----C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2293 5 +      8664 TAAC----C
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631623 5 +  17673402 TAAC----C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665910 5 +   7040546 TAAC----C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209569 5 +   1652518 TAAC----C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505992 5 +  60362399 TAAC----C
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9628 5 -     23171 TAAC----C
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222971 5 +   9314153 TAAC----C
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616106 5 +  59632846 TAAC----C
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107687 5 -  63665305 TAAC----C
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409689 5 -  46296322 TAAC----T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591963 5 +  44709034 TAAC----T
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    138 5 -      1607 TAAT----C
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271078 5 +    496798 TAAC----A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                880 5 +      9923 TGAC----C
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28279 5 -     39886 TAAT----C
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80165 5 -    217609 TAGC----C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997008 5 +  23392119 TAAT----C
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000449 5 +  23407841 TAAT----C
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63530 5 -     66877 TAAT----C
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5691 5 -     12580 TAAC----C
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43748 5 +     53515 TAAC----C
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373511 5 -  26074798 TAAC----C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8565 5 -     34880 TAAC----C
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67661 5 -     89041 TAAC----C
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3038 5 -      5494 TAAC----A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492793 2 -  27778364 ---C----C
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19626 2 +     27315 ---C----C
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141875 5 -   4669795 TAGC----C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45619 5 +     47900 TAGC----C
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1047 5 -     14410 TAGC----C
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45431 5 -    148725 TAGC----C
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27640 5 -     40656 TAGC----C
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7604 5 +     20796 TAGC----C
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12722 5 -     17524 TAGC----C
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28445 5 -     34525 TAGC----C
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12225 5 -     25376 TAGC----C
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364812 5 -  39242232 TAGC----C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270539 5 +  21565898 TAGC----C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32907 5 -     45857 TAGC----C
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27808 5 -     32606 TAGC----C
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3970 5 +      8499 TAGC----C
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26366 5 +     70610 TAGC----C
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23327 5 +     36323 TAGC----C
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13306 5 -     19938 TGAC----C
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31241 5 -     33796 TAAC----C
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5755 5 -     15404 TAAC----C
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9566 5 -     32913 GAAC----C
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19979 5 -     40346 GAAC----C
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20234 5 +    216457 GAAC----C
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20027 5 +     39636 GAAC----C
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239373 5 -   2543920 TAAT----C
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4622 5 +      5346 TAAC----C
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43097 5 -    112038 TAAC----C
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8648 5 +     34062 TAAC----C
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344228 5 +  18827391 TAGC----C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10772 5 -     44032 TAGC----C
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305553 5 - 135778131 TAGC----C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15437 5 +     15858 TATC----C
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607012 5 -    839153 TATC----C
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2127 5 +      2406 TAAT----C
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409958 5 -   2368649 TAAC----C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379839 5 - 200372422 TAAC----C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3396 5 -     84244 TAAC----C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807858 5 +  53390261 TAAC----T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3391 5 -      8242 TAAT----T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115467 5 - 224834208 TAAT----C
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9985 5 +     12657 TAAG----T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4964 5 +     87169 TAAC----C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646017 5 -   1526836 CAGT----G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18926 5 +     50838 TAAT----C
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4934 5 +     36344 TAAT----C
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28710 5 +     75252 TAAT----C
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110657 5 -   2246927 CAAC----C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293177 5 +  12879189 TGAA----C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632519 5 -  35494412 TAAC----C
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              331075 5 -   2620052 TGGC----C
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665077 2 -   1390856 ---C----C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139870 2 -    198055 ---C----C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99458 5 -    115145 CATT----C
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951179 5 -  37912305 TAAT----C
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6105 5 -     10735 TAAT----C
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856153 5 - 111700974 TTGC----C
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6854 5 +     19438 TACC----C
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240330 5 -    607251 TAAC----C
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226353 5 +  10337057 TCAC----C
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31609 5 +    110024 TAGT----C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13580 5 +     18970 TAGT----C
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916713 5 +  41312741 TAAC----T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579498 4 +  14770903 TAAC-----
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3041995 5 -   4378816 TAAC----C
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375933 5 +  39960074 TAAC----C
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411840 5 -    498745 TAAC----C
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666639 5 +   7059049 TAAA----c
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263764 5 +  21539334 TAGC----C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71725 5 -    133382 TAAC----C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_705718              301 5 +       377 TAAC----C
i Eubalaena_japonica.EubJap_flattened_line_705718        C 0 C 0
s Eulemur_albifrons.k141_51491                               15382 5 -     24895 TAAC----C
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43092 5 -     70999 TAAC----C
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87062 5 +    112731 TAAC----C
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43624 5 +     68309 TAAC----C
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53949 5 -     65740 TAAC----C
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24581 5 -     75513 TAAC----C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48776 5 -     97555 TAAC----C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5500 5 +     30972 TAAC----C
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43220 5 -     52037 TAAC----C
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59623 5 -    111500 TAAC----C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247419 5 - 206538554 AAAC----C
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117205 5 - 205367284 AAAC----C
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28303 5 -     30238 AAAC----C
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2917015 3 -   3816255 TAC------
i Fukomys_damarensis.KN121974.1                          C 0 I 5566
s Galago_moholi.ctg3793                                     126233 5 -    137831 CAAC----C
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9778 5 +     22493 CAAC----C
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21848 5 -     32986 CAAC----C
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1752 5 -     28519 TAAC----C
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92033 5 -     95226 TAAC----C
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            35068 5 -     36801 TAGT----C
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6381 5 -      8343 TAAC----C
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255396 5 - 186649187 TAAC----C
i Gorilla_gorilla.LT578341.1                             C 0 I 16
s Graphiurus_murinus.GraMur_scaffold_10447                    2550 5 -     78134 TAGT----C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15311 5 -     40692 TAAC----C
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36713 5 +     49394 TAAC----C
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61581 5 -     66874 TAAC----C
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10455 5 -     42923 TAAC----C
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17454 5 -     53142 TAAC----C
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31396 5 -    327341 TAAC----C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9707 5 +     48891 TAAC----C
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932992 3 -  22651954 CAA------
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_116546                 244 4 +      8654 TG-C----C
i Heterohyrax_brucei.HetBruBak_scaffold_116546           N 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8220 5 -     36432 TAAC----C
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552212 5 -   1711038 AAAC----C
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1650 5 -      2730 AAAC----C
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143405 5 -    630532 TAAC----C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70561 5 +     83186 TAAC----C
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72454 5 +    143317 TAAT----C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6439 5 +     12352 TAAC----C
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13623 5 +     55766 TAAC----C
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053223 5 + 191637585 TAAC----C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802101 5 +  11177569 TAAC----C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7741 5 -    135385 TAAT----C
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387447 5 +   7955117 TAAA----C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3011 5 +     11955 TAAC----C
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10620 5 -     16823 TAAC----C
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240438 5 +   9596543 TAAT----G
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72460 5 -     97402 TAAC----C
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43841 5 +    110728 TAAC----C
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63479 4 -     65777 TAAC-----
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760104 5 +  30322482 TAAC----C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4746 5 -     13097 TAAC----C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4500 5 +      5940 TAAC----C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4323 5 -      5717 TAAC----C
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10713 5 -     11567 TAAC----C
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12094 5 -     12945 TAAC----C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9616 5 +     29618 TAAC----C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9612 5 +     31569 TAAC----C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9622 5 +     24756 TAAC----C
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9622 5 +     16388 TAAC----C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814095 5 -   3914936 TAAC----C
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18464 5 +     24238 TAAT----C
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341805 5 +    662738 TAAC----C
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334760 5 -   1826925 TAGC----C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11931 5 +     19643 CAAC----C
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045601 5 -   6120653 CAAC----C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085016 5 +  43346337 taaa----t
i Loxodonta_africana.GL010049.1                          I 226 C 0
s Lycaon_pictus.CM007581.1                                41615261 5 +  59628241 TAAC----C
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46149 5 -     61512 TAGC----C
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373811 5 -  60120075 TAGC----C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26079 5 +     30207 TAGC----C
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             917 5 -      5035 TAGC----C
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26032 5 +     30527 TAGC----C
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37208 5 -     50087 TAGC----C
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46952 5 +     51645 TAGC----C
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416155 5 - 187317192 TAGC----C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400385 5 +  25927173 TAGC----C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49557 5 -     62418 TAGC----C
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2088 5 +     14901 TAGC----C
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46029 5 +     59329 TAGC----C
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271937 5 +    668171 TAGC----C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   575 5 -      5049 TAGC----C
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3735 5 +     17132 TAGC----C
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223821 5 -    270270 TACC----C
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323225 5 +  24302211 TAGC----C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358056 5 -    752769 TAGC----C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674148 5 -    737560 TAGT----C
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221444 5 +    317179 TAAT----C
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501665 5 +  40650429 TAAT----C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150990 5 +    207569 TAAC----T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26812 5 -     74585 TAAC----C
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50780 5 -    140813 CAGT----T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429847 5 +  29670104 TAAT----C
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88089 5 +     93471 TAAC----C
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10880 5 +     17804 TAAC----C
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11380 5 -     12984 TAAC----C
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19696 5 -     26561 TAAC----C
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985454 5 +  93316391 TAAC----C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47388 5 +    145209 TAGC----C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185677 5 +    200668 TGAC----C
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963054 5 +  27267610 TAAT----C
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363833 5 -   8254450 TAAC----C
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42740 5 -     48117 TAAC----C
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23259 5 -     27822 TAGC----C
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9106 5 +     27589 TAAC----C
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53237 5 -     62432 TAAC----C
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360194 5 +    437263 TAAC----C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179909 5 +    366855 TGAC----C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26155 5 -     82753 TAAC----C
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19121 5 -     63510 TAAC----C
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39801 4 +     47283 TAAC-----
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593765 3 + 120012414 TAG------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688154 3 + 129401213 TAG------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497448 3 + 130317789 TAG------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84106 5 -     86153 TAGT----C
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355734 5 +  14710649 TAAC----C
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63709 5 +     67721 TAAT----C
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794057 4 +  10118263 AAAC-----
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388230 4 +   6019432 TAAC-----
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384018 4 +   4330536 TAAC-----
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3051 4 +     18357 TAAC-----
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120406 2 +    130748 ---C----C
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947335 5 +   3037898 CAAT----C
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29915 5 +     34575 TAAC----C
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232860 5 -   7148211 TAAC----C
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128874 5 -    149072 TGAC----T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54331 5 -    132029 TAAC----C
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10426 5 -     16345 TAAC----C
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16311 5 +     22201 TAAC----C
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414532 5 -  22158432 TAAC----C
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26709 5 -     54323 TAAC----C
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198857 5 +   9404916 TAAC----C
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638830 5 + 196305487 CAAC----C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1433 5 -      9413 CAAC----C
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566213 5 - 199412804 CAAC----C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557521 2 -   3988456 ---T----C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055665 5 -  11899542 TAAT----C
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452523 5 +   2017862 TAAC----C
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436923 5 -    630418 TAAC----C
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15117 5 +    150152 TAAC----C
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93406 5 -    140218 TAAT----C
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4275 5 -     41509 TAAT----C
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103262 5 +  10937097 TAAC----C
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                308 5 +     11607 TAAA----C
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104258 5 - 174332312 TAAT----C
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39902 5 +    559221 TAAC----C
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41381 5 -     51505 CAAA----C
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354384 5 +   1103335 CAAA----C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404827 5 -  44047080 TAAC----C
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5346 5 +     17875 TAAC----C
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473425 5 - 189151597 TAAC----C
i Pan_troglodytes.CM009242.2                             I 16 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25126 5 -    230217 AAAC----C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462452 5 -  18783137 AAAC----C
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973111 5 +   8748460 AAAC----C
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616355 5 +   2937107 TAAC----C
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244057 5 - 183742232 TAGC----C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10519 5 +     21308 TAGC----C
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293092 5 -  20919399 TAGC----C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23167 5 -     27687 TAGC----C
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16313 5 +     16796 TAGC----C
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23124 5 -     23640 TAGC----C
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15724 5 +     78924 TAAT----C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27711 5 +     31479 CAAC----C
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20079 5 -     24908 CAAC----C
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2537 5 +      9367 TAAT----C
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247485 5 +  18517816 TAAT----C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32558 5 -     56120 TGAT----C
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4788 5 -     63832 TAAC----C
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3346 5 +     55023 TAAC----C
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2884 5 -     89929 TAAC----C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3474 5 +     40849 TAAC----C
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255149 5 +  14605196 TAAC----C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4647 4 +     22231 TAAC-----
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65464 5 +    207309 TAAC----C
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6556 5 -     25401 CAAC----C
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32300 5 +     58159 TAAC----C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32576 5 +     63561 TAAC----C
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32336 5 +     51148 TAAC----C
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557306 5 -   4542175 CAAC----C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32320 5 +     51125 TAAC----C
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1805 5 +     19503 TAAC----C
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8731 5 +     39866 GAAC----C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3813 5 -      9282 GAAC----C
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43217 5 -     87950 GAAC----C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43613 5 -     88961 GAAC----C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8309 5 -     39403 GAAC----C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43260 5 +     87928 GAAC----C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8308 5 -     60166 GAAC----C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15245 5 -     67232 GAAC----C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43161 5 -     90634 GAAC----C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44628 5 +     89403 GAAC----C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178535 5 - 189387572 TAAC----C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193352 5 -   9816681 TAAC----C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28495 5 +     69807 TAAC----C
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45676 5 -     80239 TAAC----C
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 4234 4 +      7663 TG-C----C
i Procavia_capensis.ProCapCap_scaffold_165387            I 227 C 0
s Prolemur_simus.MPIZ01000396.1                            1983252 5 +   4620579 TAAC----C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566762 5 -   2598838 TAAC----C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4400 5 -      7103 TAAC----C
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             4997 5 -     11706 TAAC----C
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8735 5 -     30655 TAAC----C
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35048 5 +     46564 TAAC----C
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95327 5 -     98465 TAAC----C
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8966 5 +     35169 TAAC----C
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38081 5 +     52041 TAGT----T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52802 5 -     66298 TGAC----C
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5308 5 -     18639 TAAC----C
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841394 5 -  28871421 TACC----C
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537909 5 -   4952924 TACC----C
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099768 5 +  38429054 AAAC----C
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27864 5 +     91421 TAGC----C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154348 5 -   7812017 TAGC----C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8721 5 +     72585 TAGC----C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53840 5 +     55069 TGAC----C
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023371 5 -  90668790 Tagc----t
i Rattus_norvegicus.chr16                                C 0 I 208
s Rhinolophus_sinicus.LVEH01000134.1                       2915374 5 +   3329780 AAAC----C
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2449 5 +      7119 TAAC----C
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123065 5 + 195417433 TAAC----C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237291 5 -   7961872 TAAC----C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75893 5 -    116970 TACC----C
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4620 5 +     27962 TAAC----C
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4514 5 +      6077 TAAC----C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4604 5 +      5971 TAAC----C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4525 5 +      5932 TAAC----C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2867 5 -      4390 TAAC----C
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392304 5 - 209938924 TAAC----C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4473 5 +      5979 TAAC----C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1043 5 -     22275 TAAC----C
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8515 5 +     16473 TAAC----C
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109640 5 + 121099817 TAAC----C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31207 5 -     47369 TAAC----C
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31593 5 -     79414 TAAC----C
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28284 5 -     34454 TAAC----C
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15685 5 -     22428 TAAC----C
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30839 5 -     47109 TAAC----C
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238885 5 +   5703754 CAAC----C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8475 5 +     21866 CAAC----C
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116536 5 +    313613 TAGC----T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26190 5 +     27374 TAAC----C
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29702 5 +     58920 TAAC----C
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16200 5 -     45317 TAAC----C
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23858 5 -     42441 TAAC----C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26536 5 -     29113 TAAC----C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29611 5 -     48123 TAAC----C
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49866 4 +     77746 TAAT-----
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864810 5 -   1910179 TAAC----C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671917 5 +  18376816 TAAC----C
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869025 5 +   3870691 TAAT----C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7396 5 -     97271 TAAC----C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125537 5 +    196729 TAAC----C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644422 5 +  69701581 TAGC----C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391791 5 +   1523678 TAAC----C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14968 5 +     22964 TAAC----T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3397 2 +      5583 ---C----C
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192275 5 +    199430 TAAC----C
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106244 5 -    539355 TAAC----C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1310 5 +      9917 TAAC----A
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8108 5 +     20590 TAAC----A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354043 5 - 186847797 TGGC----C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24736 5 -     33621 TAAT----C
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20385 5 -     31044 TGAC----C
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480795 5 -    610378 TGAC----C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21735 5 +     26378 TAAC----C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34411 5 -     78344 TAAC----C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21060 5 +     25722 TAAC----C
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29367 5 -     62838 TAAC----C
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29411 5 +     46913 TAAC----C
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10220 5 -     28527 TAAC----C
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31302 5 -     64340 TAAA----C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29340 5 -     63452 TAAC----C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10787 5 +     22490 TAAC----C
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4210 5 -      6147 TAAC----C
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11123 5 -     13050 TAAC----C
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256353 5 -   6242583 TAAC----C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2381 5 +     19340 TAAC----C
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174129 5 -    200418 TAAT----C
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6481758 5 -  10818551 TAAC----C
i Trichechus_manatus.JH594705.1                          I 220 C 0
s Tupaia_chinensis.KB320699.1                              1835032 5 -   4065304 TAAC----C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9052 5 -     70247 TAAC----C
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366375 5 -  33153633 TAAC----C
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4263 5 -     21056 TAAT----T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182698 5 +   5085361 TAAC----C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25904 9 -     30710 TAACTACAC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24811 9 -    147434 TAACTACAC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76955 5 +   5488506 TAAC----C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105623 5 -    112863 TAAC----C
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29731 5 -     86975 TAAC----C
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       624 5 -      1899 TAAT----T
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1659 5 +      2126 TAAC----C
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Xerus_inauris.XerIna_scaffold_2302                        174816 0 -    224448 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 44857 0 -     83289 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6086 16 +     36723 ATAA-C-AGCT-GAT---G--AAA
s Acinonyx_jubatus.LLWD01001279.1                           813515 15 +   1699592 ATGCAT-AATC-AG----A--AA-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25757 16 +     63021 ATATAC-AG-C-AGC---A--AAG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415967 16 +  29979442 ACGAAC-AGTC-AAC---A--AA-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216312 16 +    347723 ATGAAC-AATC-AAC---A--AA-
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18664 17 -     61208 GTACAC-AAAC-AAC---A--AAG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 31
s Allenopithecus_nigroviridis.k141_3755588                   48731 16 +     53615 ATAA-T-AGCC-AAT---G--AAA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           762 16 +     13857 ATAA-T-AGCC-AAT---G--AAA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17313 16 -     21945 ATAA-T-AGCC-AAT---G--AAA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         18998 16 +     32033 ATAA-T-AGCC-AAT---G--AAA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72832 16 -     84148 GTAA-T-AGGC-GAT---G--AAA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45071 16 -     78289 GTAA-T-AGGC-GAT---G--AAA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44510 16 +     55831 GTAA-T-AGGC-GAT---G--AAA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42960 16 -     64179 GTAA-T-AGGC-GAT---G--AAA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24594 16 -     24835 GTAA-T-AGGC-GAT---G--AAA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41585 16 +     45454 GTAA-T-AGGC-AAT---G--AAA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47234 16 +     70886 GTAA-T-AGGC-GAT---G--AAA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9407 16 +     30854 GTAA-T-AGGC-GAT---G--AAA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33541 16 +     42133 ATAA-T-AGGC-GAT---G--AAA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585965 16 +   2318259 ATGCAC-AATT-AAC---A--AA-
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177763 15 -    412891 GCGCAC-AATC-AGC---A--A--
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51072 16 -     68529 ATGCAC-AATT-AAC---A--AA-
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1798 16 +     17741 AGAA-T-AGCC-AAT---G--AAA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2423 16 -     15923 AGAA-T-AGCC-AAT---G--AAA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672705 16 +   5030052 AGAA-T-AGCC-AAT---G--AAA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2699 16 -     16391 AGAA-T-AGCC-AAT---G--AAA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2258 16 -     17186 AGAA-T-AGCC-AAT---G--AAA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16777 17 -     32367 GTATAC-AACC-AAC---A--AAA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20870 17 -     45910 ACACAC-AGCC-AAC---A--AAA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6029 15 -     15198 GTGCCC-AATC-AAC---A--A--
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275295 16 +  21539123 ATAA-T-AGCC-GAT---G--AAA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11463 16 +     48076 ATAA-T-AGCT-GAT---G--AAA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6598 16 -     28759 ATAA-T-AGCC-GAT---G--AAA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34152 16 +     44353 ATAA-T-AGCC-GAT---G--AAA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49523 16 -     71267 ATAA-T-AGCC-GAT---G--AAA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23581 16 -     33135 ATAA-T-AGCC-GAT---G--AAA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6872 17 +     11645 ATACAC-AGCC-AAC---A--AAA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6880 17 -     19611 ATACAC-AGCC-AAC---A--AAA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964116 16 -  23207421 ATGCAC-AATG-AAC---A--AA-
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          616 16 -     25979 ATGCAC-AATG-AAC---A--AA-
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86973 16 +    124022 ATGCAC-AATT-AAC---A--AA-
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22515 16 +    288883 ATGCAC-AATT-AAC---A--AA-
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356905 16 +  48749331 ATGCAC-AATT-AAC---A--AA-
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755469 16 +   1948126 ATGCAC-AATT-AAC---A--AA-
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545611 16 -  45695690 ATGCAC-AATT-AAC---A--AA-
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530626 16 -   4408762 ATGCAC-AATT-AAC---A--AA-
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8471 16 +     28062 ATAA-T-AGCT-GAT---G--AAA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43765 16 -     91139 ATAA-T-AGCT-GAT---G--AAA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21291 16 +     95584 ATAA-T-AGCT-GAT---G--AAA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21204 16 +    119600 ATAA-T-AGCT-GAT---G--AAA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10778 16 +     18648 ATAA-T-GGCC-GAT---G--AAA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10313 16 -     13885 ATAA-T-GGCC-GAT---G--AAA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2383 16 -      8861 ATAA-T-GGCC-GAT---G--AAA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454775 16 + 189096842 ATAA-T-GGCC-GAT---G--AAA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2298 16 +      8664 ATAA-T-GGCC-GAT---G--AAA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631628 16 +  17673402 ACGCAC-AAAT-AAC---A--AA-
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665915 16 +   7040546 ACGCAC-AAAT-AAC---A--AA-
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209574 16 +   1652518 ACGCAC-AAAT-AAC---A--AA-
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42505997 16 +  60362399 ATGCAC-AATC-AGC---A--AA-
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9633 16 -     23171 ATGCAC-AATC-AGC---A--AA-
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222976 16 +   9314153 ATGCAC-AATC-AGC---A--AA-
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616111 16 +  59632846 ATGCAC-AATC-AGC---A--AA-
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107692 16 -  63665305 ATGCAC-AATC-AGC---A--AA-
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409694 16 -  46296322 ATGCAC-AATT-AAC---A--AA-
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26591968 16 +  44709034 ATGCAC-AATT-AAC---A--AA-
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    143 17 -      1607 CTATAC-AACC-AAC---A--GAA
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271083 13 +    496798 Acatac-aaca-aaa---------
i Carlito_syrichta.NW_007259797.1                        C 0 I 3
s Carollia_perspicillata.CarPer_scaffold_107871                885 15 +      9923 GTGCAC-AATC-AAC---A--A--
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28284 18 -     39886 ATACAT-GACCCCAA---A--AAA
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80170 16 -    217609 ACATAC-AATT-AAC---A--AA-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997013 17 +  23392119 ATACAT-AGCC-AGC---A--GAA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000454 17 +  23407841 ATACAT-AGCC-AGC---A--GAA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63535 17 -     66877 ATACAT-AGCC-AGC---A--GAA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5696 16 -     12580 ATAA-T-GGCC-AAT---G--AAA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43753 16 +     53515 ATAA-T-GGCC-GAT---G--AAA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373516 16 -  26074798 ATAA-T-AGCC-AAT---G--AAA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8570 16 -     34880 ATAA-T-AGCC-AAT---G--AAA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67666 16 -     89041 ATAA-T-AGCC-AAT---G--AAA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3043 13 -      5494 ACATAC-AACA-AAT---------
i Cephalopachus_bancanus.k141_1689090                    C 0 I 3
s Ceratotherium_simum.JH767749.1                          15492795 16 -  27778364 ATGCAC-AATC-AAT---A--AA-
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19628 16 +     27315 ATGCAC-AATC-AAT---A--AA-
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141880 16 -   4669795 ATAA-T-AGCC-AAT---G--AAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45624 16 +     47900 ATAA-T-AGCC-AAT---G--AAA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1052 16 -     14410 ATAA-T-AGCC-AAT---G--AAA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45436 16 -    148725 ATAA-T-AGCC-AAT---G--AAA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27645 16 -     40656 ATAA-T-AGCC-AAT---G--AAA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7609 16 +     20796 ATAA-T-AGCC-AAT---G--AAA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12727 16 -     17524 ATAA-T-AGCC-AAT---G--AAA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28450 16 -     34525 ATAA-T-AGCC-AAT---G--AAA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12230 16 -     25376 ATAA-T-AGCC-AAT---G--AAA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364817 16 -  39242232 ATAA-T-AGCC-AAT---G--AAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270544 16 +  21565898 ATAA-T-AGCC-AAT---G--AAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32912 16 -     45857 ATAA-T-AGCC-AAT---G--AAA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27813 16 -     32606 ATAA-T-AGCC-AAT---G--AAA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3975 16 +      8499 ATAA-T-AGCC-AAT---G--AAA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26371 16 +     70610 ATAA-T-AGCC-AAT---G--AAA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23332 16 +     36323 ATAA-T-AGCC-AAT---G--AAA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13311 17 -     19938 ATGCAC-AAGC-ACA---A-AAA-
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31246 17 -     33796 ACATAC-AGCC-AAC---A--AAA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5760 17 -     15404 ACATAC-AGCC-AAC---A--AAA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9571 16 -     32913 ATCA-T-AGCA-GAT---G--AAA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             19984 16 -     40346 ATCA-T-AGCA-GAT---G--AAA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20239 16 +    216457 ATCA-T-AGCA-GAT---G--AAA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20032 16 +     39636 ATCA-T-AGCA-GAT---G--AAA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239378 17 -   2543920 ATACTT-AACC-AAC---A--AAA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4627 16 +      5346 ATGA-T-GGCC-GAT---G--AAA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43102 16 -    112038 ATAA-T-AGCT-GAT---G--AAA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8653 16 +     34062 ATAA-T-AGCT-GAT---G--AAA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344233 16 +  18827391 ATAA-T-AGCC-AAT---G--AAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10777 16 -     44032 ATAA-T-AGCC-AAT---G--AAA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305558 16 - 135778131 ATAA-T-AGCC-AAT---G--AAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15442 17 +     15858 ATGCAC-AACC-ACA---A-AAA-
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607017 17 -    839153 ATGCAC-AACC-ACA---A-AAA-
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2132 16 +      2406 ATGTAC-AACC-ATA---A--AG-
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409963 16 -   2368649 ATAA-T-AGCC-GAT---T--AAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379844 16 - 200372422 ATAA-T-AGCC-GAT---T--AAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3401 16 -     84244 ATAA-T-AGCC-GAT---T--AAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807863 18 +  53390261 ATGCAT-AATG-aac---ataaa-
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3396 16 -      8242 GTGCAC-AATC-AAC---A--AA-
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115472 16 - 224834208 ATATAC-AG-C-AGC---A--AGA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846               9990 15 +     12657 ATGCAA-AGCC-AAC---A--A--
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4969 15 +     87169 ATGCAC-AATC-CA----A--AA-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646022 17 -   1526836 ATACAT-AATT-AAC---A--AAA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18931 17 +     50838 ATGCAC-AACC-AAT---A--GAA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4939 17 +     36344 ATATAT-AACC-AGC---A--AAA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28715 17 +     75252 AAACAT-AACC-AGC---A--AAA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110662 17 -   2246927 ATGCAC-AACC-ACA---A-AAA-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293182 17 +  12879189 ATACAC-AGCC-AAC---A--AAA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632524 16 -  35494412 ATGCAC-AGTG-AAT---A--AA-
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672366.1                              331080 15 -   2620052 GTGCAC-AATC-AAC---A--A--
i Desmodus_rotundus.KZ672366.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665079 16 -   1390856 TTGCAC-AATC-AAT---A--AA-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139872 16 -    198055 ATGCAC-AATC-AAT---A--AA-
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99463 17 -    115145 ATACTG-AACC-AGC---A--AAA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951184 10 -  37912305 ATACAC-AACC-------------
i Dipodomys_ordii.KN672350.1                             C 0 I 4
s Dipodomys_stephensi.DipSte_scaffold_89095                   6110 10 -     10735 ATACAT-AACC-------------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 4
s Echinops_telfairi.JH980293.1                            62856158 16 - 111700974 ATGCAC-AACC-ACA---A--AA-
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6859 16 +     19438 ATGCAC-AATC-AAT---A--AA-
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240335 16 -    607251 ATGCAC-AATT-AAC---A--AA-
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226358 16 +  10337057 ATGCAC-AACC-CCA---A--AA-
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31614 16 +    110024 CTATAC-AG-C-AGC---A--AGG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13585 16 +     18970 ATATAC-AG-C-AGC---A--AGG
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916718 16 +  41312741 ATGAAC-AATA-GAC---A--AA-
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579502 15 +  14770903 -TACAT-AACC-AAC---A--AG-
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042000 16 -   4378816 ACGCAC-AATC-GAT---A--AA-
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375938 16 +  39960074 ACGCAC-AATC-GAT---A--AA-
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411845 16 -    498745 ACGCAC-AATC-GAT---A--AA-
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666644 15 +   7059049 -tgcac-aatt-aaa---a--aa-
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263769 16 +  21539334 ATAA-T-GGCC-AAT---G--AAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71730 16 -    133382 ATGCAC-AATG-AAC---A--AA-
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_705718              306 16 +       377 ATGCAC-AATG-AAC---A--AA-
i Eubalaena_japonica.EubJap_flattened_line_705718        C 0 C 0
s Eulemur_albifrons.k141_51491                               15387 17 -     24895 ACACAC-AGCC-AAC---A--AAA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43097 17 -     70999 ACACAC-ACCC-AAC---A--AAA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87067 17 +    112731 ACACAC-AGCC-AAC---A--AAA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43629 17 +     68309 ACACAC-AGCC-AAC---A--AAA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53954 17 -     65740 ACACAC-AGCC-AAC---A--AAA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24586 17 -     75513 ACACAC-AGCC-AAC---A--AAA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48781 17 -     97555 ACACAC-AGCC-AAC---A--AAA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5505 17 +     30972 ACACAC-AGCC-AAC---A--AAA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43225 17 -     52037 ACACAC-AGCC-AAC---A--AAA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59628 17 -    111500 ACACAC-AGCC-AAC---A--AAA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247424 15 - 206538554 ATGGAT-AATC-AG----A--AA-
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117210 15 - 205367284 ATGGAT-AATC-AG----A--AA-
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28308 15 -     30238 ATGCAT-AATC-AG----A--AA-
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922584 17 -   3816255 gtaCAT-AACC-AAC---A--AAA
i Fukomys_damarensis.KN121974.1                          I 5566 C 0
s Galago_moholi.ctg3793                                     126238 17 -    137831 ACACAC-AACC-AAC---A--AAA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9783 17 +     22493 ACACAC-AACC-AAC---A--AAA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21853 17 -     32986 ACGCAC-AACC-AAC---A--AAA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1757 17 -     28519 ATGGAC-AACC-AGC---A--AAA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92038 16 -     95226 ATGCAC-AATT-AAC---A--AA-
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            35073 17 -     36801 ATACAA-AATC-AAC---T--AAA
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6386 16 -      8343 ATAA-C-AGCT-GAT---G--AAA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 71879 16 +  33314783 ATAA-C-AGCT-GAT---G--AAA
i Gorilla_gorilla.LT578336.1                             I 133 I 81
s Graphiurus_murinus.GraMur_scaffold_10447                    2555 17 -     78134 ATGCAA-AACT-AAC---T--AAA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15316 17 -     40692 ACACAC-AGCC-AAC---A--AAA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36718 17 +     49394 ACACAC-AGCC-AAC---A--AAA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61586 17 -     66874 ACACAC-AGCC-AAC---A--AAA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10460 17 -     42923 ACACAC-AGCC-AAC---A--AAA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17459 17 -     53142 ACACAC-AGCC-AAC---A--AAA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31401 15 -    327341 ATGCAT-AATC-CA----A--AA-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9712 16 +     48891 ATGAAC-AATT-AAC---A--AA-
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1932997 17 -  22651954 ATACAT-AACC-AAC---A--AAA
i Heterocephalus_glaber.JH602082.1                       I 2 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                 248 16 +      8654 ACACAC-AACA-AGC---A--AA-
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8225 16 -     36432 ATGCAC-AATT-AAC---A--AA-
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552217 16 -   1711038 ATGCAT-AATC-AAC---A--AA-
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1655 16 -      2730 ATGCAC-AATC-AAC---A--AA-
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143410 16 -    630532 ATAA-C-AGCC-GAT---G--AAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70566 15 +     83186 ATGTGC-AACC-AA----A--AA-
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72459 17 +    143317 ATACAT-AGCC-AGC---A--AAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6444 16 +     12352 ATAA-C-AGCC-GAT---G--AAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13628 16 +     55766 ATAA-C-AGCC-GAT---G--AAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053228 16 + 191637585 ATAA-C-AGCC-GAT---G--AAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802106 16 +  11177569 ATAA-C-GGCC-GAT---G--AAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7746 17 -    135385 GTACAT-AACC-TAC---A--AAA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387452 17 +   7955117 TTATAC-AACT-AAC---A--AAA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3016 17 +     11955 ACACAC-AGCC-AAC---A--AAA
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10625 16 -     16823 ATGCAC-AATG-AAT---A--AA-
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240443 17 +   9596543 GTACAC-AAAT-AAC---A--AAG
i Jaculus_jaculus.JH725527.1                             C 0 I 30
s Kogia_breviceps.KogBre_flattened_line_3970                 72465 16 -     97402 ATGCAC-AATG-AAC---A--AA-
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43846 16 +    110728 ATAA-T-AGCC-GAT---G--AAA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63483 15 -     65777 -TGCAT-CATC-AAC---A--AG-
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760109 17 +  30322482 ACACAC-AGCC-AAC---A--AAA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4751 16 -     13097 ATGA-T-GGCC-GAT---G--AAA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4505 16 +      5940 ATGA-T-GGCC-GAT---G--AAA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4328 16 -      5717 ATGA-T-GGCC-GAT---G--AAA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10718 16 -     11567 ATAA-T-GGCC-GAT---G--AAA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12099 16 -     12945 ATAA-T-GGCC-GAT---G--AAA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9621 17 +     29618 ACACAC-AGCC-AAC---A--AAA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9617 17 +     31569 ACACAC-AGCC-AAC---A--AAA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9627 17 +     24756 ACACAC-AGCC-AAC---A--AAA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9627 17 +     16388 ACACAC-AGCC-AAC---A--AAA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814100 16 -   3914936 ATGAAC-AATC-AAC---A--AA-
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18469 17 +     24238 GCTCAC-AACC-CAC---A--AGA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341810 16 +    662738 ATGcac-aatg-aat---a--aa-
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334765 16 -   1826925 ATAA-T-AGCC-AAT---G--AAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11936 17 +     19643 ACACAC-AGCC-AAC---A--AAA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045606 17 -   6120653 ACACAC-AGCC-AAC---A--AAA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085021 16 +  43346337 GTGCAC-AATC-ACA---A--AG-
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615266 16 +  59628241 ATGCGC-AATC-AGC---A--AA-
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46154 16 -     61512 ATAA-T-AGCC-AAT---G--AAA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373816 16 -  60120075 ATAA-T-AGCC-AAT---G--AAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26084 16 +     30207 ATAA-T-AGCC-AAT---G--AAA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             922 16 -      5035 ATAA-T-AGCC-AAT---G--AAA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26037 16 +     30527 ATAA-T-AGCC-AAT---G--AAA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37213 16 -     50087 ATAA-T-AGCC-AAT---G--AAA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46957 16 +     51645 ATAA-T-AGCC-AAT---G--AAA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416160 16 - 187317192 ATAA-T-AGCC-AAT---G--AAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400390 16 +  25927173 ATAA-T-AGCC-AAT---G--AAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49562 16 -     62418 ATAA-T-AGCC-AAT---T--AAA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2093 16 +     14901 ATAA-T-AGCC-AAT---G--AAA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46034 16 +     59329 ATAA-T-AGCC-AAT---G--AAA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271942 16 +    668171 ATAA-T-AGCC-AAT---G--AAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   580 16 -      5049 ATAA-T-AGCC-AAT---G--AAA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3740 16 +     17132 ATAA-T-AGCC-AAT---G--AAA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223826 16 -    270270 ATGCAC-AATC-AAT---A--AA-
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323230 16 +  24302211 ATAA-T-AGCC-AAT---G--AAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358061 16 -    752769 ATAA-T-AGCC-AAT---G--AAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674153 16 -    737560 ATGCAC-AATC-GAC---A--GA-
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221449 16 +    317179 ATGCAC-AATC-GAC---A--GA-
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501670 17 +  40650429 CTATAC-AACT-AAC---A--AAA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       150995 16 +    207569 GTGCAC-AAGC-AAC---A--AA-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26817 16 -     74585 ATGAAC-AATA-GAC---A--AA-
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50785 16 -    140813 ATATAC-AG-C-AGC---A--AAG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429852 16 +  29670104 ATATAC-AG-C-AAC---A--AGG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88094 16 +     93471 ATGCAC-AATG-AAC---A--AA-
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10885 16 +     17804 ATAA-T-GGCC-GAT---G--AAA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11385 16 -     12984 ATAA-T-GGCC-GAT---G--AAA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19701 16 -     26561 ATAA-T-GGCC-GAT---G--AAA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985459 17 +  93316391 GCATAC-AGCC-AAC---A--AAA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47393 16 +    145209 ACGCGT-TATC-ACA---A--AA-
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185682 15 +    200668 ATGCAC-AATC-AAC---A--A--
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963059 16 +  27267610 ATATAC-AG-C-AGC---A--AGG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363838 16 -   8254450 ATGCAC-AATC-AAC---A--AA-
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42745 16 -     48117 ATGCAC-AATC-AAC---A--AA-
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23264 16 -     27822 ATAA-T-AGCC-AAT---G--AAA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9111 16 +     27589 ATGAAC-AATC-AAC---A--AA-
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53242 17 -     62432 ACATAC-AGCC-AAC---A--AAA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360199 16 +    437263 ATACAC-AGTG-AAT---A--AA-
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179914 15 +    366855 ATGCAC-AATC-AAC---A--A--
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26160 16 -     82753 ATGCAC-AATT-AAC---A--AA-
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19126 15 -     63510 ATGTAT-AATC-CA----A--AA-
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39805 15 +     47283 -TGCAA-AATC-AAC---A--AG-
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593768 15 + 120012414 -CATAC-AA-C-AGG---A--ACT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688157 15 + 129401213 -CATAC-AA-C-AGG---A--ACT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497451 15 + 130317789 -CATAC-AA-C-AGG---A--ACT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84111 17 -     86153 ATACAA-AAGT-AAC---T--AAA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355739 16 +  14710649 ATGAAC-AATA-GAC---A--AA-
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63714 17 +     67721 CTACCC-AACC-AAT---A--GAA
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794061 15 +  10118263 -TGCAT-AATC-AAC---A--AG-
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388234 15 +   6019432 -TGCAC-AATC-AAC---A--AG-
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384022 15 +   4330536 -TGCAT-AATC-AAC---A--AG-
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3055 15 +     18357 -TGCAT-AATC-AAC---A--AG-
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120408 20 +    130748 ACGTAT-AACC-ACACACA-AAA-
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947340 16 +   3037898 ATATAT-AT-C-AGT---G--AAG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29920 16 +     34575 ATAA-T-AGCC-GAT---T--AAA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232865 16 -   7148211 ATGCAC-AGTG-AAT---A--AA-
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128879  6 -    149072 GTGCAT------------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54336 16 -    132029 ATAA-C-AGCC-GAT---G--AAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10431 16 -     16345 ATAA-C-AGCC-GAT---G--AAA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16316 16 +     22201 ATAA-C-AGCC-GAT---G--AAA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414537 16 -  22158432 ATAA-C-AGCC-GAT---G--AAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26714 16 -     54323 ATAA-C-AGCC-GAT---G--AAA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198862 16 +   9404916 ATGCAC-AATC-AGC---A--AA-
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638835 17 + 196305487 ACACAC-AGCC-AAC---A--AAA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1438 17 -      9413 ACACAC-AGCC-AAC---A--AAA
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566218 17 - 199412804 ACACAC-AGCC-AAC---A--AAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557523 17 -   3988456 ATTCAC-AACC-CCT---T--AAA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055670 17 -  11899542 ATACAC-AACC-AAC---A--GAA
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452528 16 +   2017862 AGGAAC-AATC-AAC---A--AA-
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436928 16 -    630418 ATGCAC-CATT-AAC---A--AA-
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15122 16 +    150152 ATGCAC-AATT-AAC---A--AA-
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93411 16 -    140218 ATATAC-AG-C-AGC---A--AGG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4280 16 -     41509 ATCTAC-AG-C-AGC---A--AGG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103267 16 +  10937097 ATGCAC-AGTG-AAT---A--AA-
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                313 16 +     11607 ACGCAC-AACC-ACA---A--AA-
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104263 17 - 174332312 ACTCAC-AACC-CAC---A--AGA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39907 16 +    559221 ATGCAC-AATC-AGC---A--AA-
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41386 17 -     51505 ATGCAC-AACC-AAC---A--AAA
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354389 17 +   1103335 ATGCAC-AACC-AAC---A--AAA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404832 16 -  44047080 ATGCAC-AATT-AAC---A--AA-
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5351 16 +     17875 ATGCAC-AATT-AAC---A--AA-
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473430 16 - 189151597 ATAA-C-AGCT-GAT---G--AAA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25131 15 -    230217 ATGCAT-AATC-AG----A--AA-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462457 15 -  18783137 ATGCAT-AATC-AG----A--AA-
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973116 15 +   8748460 ATGCAT-AATC-AG----A--AA-
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616360 16 +   2937107 ATGCAC-AATT-AAC---A--AA-
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244062 16 - 183742232 ATAA-T-AGCC-AAT---G--AAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10524 16 +     21308 ATAA-T-AGCC-AAT---G--AAA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293097 16 -  20919399 ATAA-T-AGCC-AAT---G--AAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23172 16 -     27687 ATAA-T-AGCC-AAT---G--AAA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16318 16 +     16796 ATAA-T-AGCC-AAT---G--AAA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23129 16 -     23640 ATAA-T-AGCC-AAT---G--AAA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27716 17 +     31479 ACACAC-AGCC-AAC---A--AAA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20084 17 -     24908 ACACAT-AGCC-AAC---A--AAA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2542  9 +      9367 ATACAC--ACC-------------
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 4
s Peromyscus_maniculatus.KI615324.1                         247490 16 +  18517816 ATCTAC-AG-C-AGC---A--AGT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32563 17 -     56120 ATACAT-AACT-GAC---A--AAA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4793 16 -     63832 ATGCAC-AGTG-AAT---A--AA-
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3351 16 +     55023 ATAA-T-AGCC-GAT---T--AAA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2889 16 -     89929 ATAA-T-AGCC-GAT---T--AAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3479 16 +     40849 ATAA-T-AGCC-GAT---T--AAA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255154 16 +  14605196 ATAA-T-AGCC-GAT---T--AAA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4651 15 +     22231 -TGCAT-AATC-AAC---A--AG-
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65469 16 +    207309 ATGA-T-AGCT-GAT---G--AAA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6561 16 -     25401 ATGA-T-AGCT-GAT---G--AAA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32305 16 +     58159 ATGA-T-AGCT-GAT---G--AAA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32581 16 +     63561 ATGA-T-AGCT-GAT---G--AAA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32341 16 +     51148 ATGA-T-AGCT-GAT---G--AAA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557311 16 -   4542175 ATGA-T-AGCT-GAT---G--AAA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32325 16 +     51125 ATGA-T-AGCT-GAT---G--AAA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1810 16 +     19503 ATGCAC-AATG-AAC---A--AA-
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8736 16 +     39866 ATCT-T-AGCC-AAT---G--AAA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3818 16 -      9282 ATCT-T-AGCC-AAT---G--AAA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43222 16 -     87950 ATCT-T-AGCC-AAT---G--AAA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43618 16 -     88961 ATCT-T-AGCC-AAT---G--AAA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8314 16 -     39403 ATCT-T-AGCC-AAT---G--AAA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43265 16 +     87928 ATCT-T-AGCC-AAT---G--AAA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8313 16 -     60166 ATCT-T-AGCC-AAT---G--AAA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15250 16 -     67232 ATCT-T-AGCC-AAT---G--AAA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43166 16 -     90634 ATCT-T-AGCC-AAT---G--AAA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44633 16 +     89403 ATCT-T-AGCC-AAT---G--AAA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178540 16 - 189387572 ATAA-C-AGCT-GAT---G--AAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193357 16 -   9816681 ATAA-C-AGCT-GAT---G--AAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28500 16 +     69807 ATAA-T-AGCC-GAT---T--AAA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45681 16 -     80239 ATAA-T-AGCC-GAT---T--AAA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 4238 16 +      7663 ACACAC-AACA-AGC---A--AA-
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983257 17 +   4620579 ACACAC-AGCC-AAC---A--AAA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566767 17 -   2598838 ATACAC-AGCC-AAC---A--AAA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4405 17 -      7103 ATACAC-AGCC-AAC---A--AAA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5002 17 -     11706 ATACAC-AGCC-AAC---A--AAA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8740 17 -     30655 ATACAC-AGCC-AAC---A--AAA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35053 17 +     46564 ATACAC-AGCC-AAC---A--AAA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95332 17 -     98465 ATACAC-ACCC-AAC---A--AAA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8971 17 +     35169 ATACAC-AGCC-AAC---A--AAA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38086 16 +     52041 ATATAC-AG-C-AGC---A--AAG
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52807 15 -     66298 ATACAC-AATC-AAC---A--C--
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5313 16 -     18639 ATGAAC-AATA-GAC---A--AA-
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841399 16 -  28871421 ATGCAC-AATC-AAT---A--AA-
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537914 16 -   4952924 ATGCAC-AGTC-AAT---A--AA-
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099773 15 +  38429054 ATGCAT-AATC-AG----A--AA-
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27869 16 +     91421 ATAA-T-AGCC-GAT---T--AAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154353 16 -   7812017 ATAA-T-AGCC-GAT---T--AAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8726 16 +     72585 ATAA-T-AGCC-GAT---T--AAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53845 16 +     55069 ATGCAT-AATT-AAC---A--AA-
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023584 16 -  90668790 GCATAC-AG-C-AGG---A--ATT
i Rattus_norvegicus.chr16                                I 208 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915379 16 +   3329780 ATGCAC-AATC-AAC---A--AA-
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2454 16 +      7119 ATAA-T-AGCC-AAT---T--AAA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123070 16 + 195417433 ATAA-T-AGCC-AAT---T--AAA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237296 16 -   7961872 ATAA-T-AGCC-AAT---T--AAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75898 16 -    116970 ATGCAC-AATC-AAT---A--AA-
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4625 16 +     27962 ATGA-T-GGCC-GAT---G--AAA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4519 16 +      6077 ATGA-T-GGCC-GAT---G--AAA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4609 16 +      5971 ACGA-T-GGCC-GAT---G--AAA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4530 16 +      5932 ACGA-T-GGCC-GAT---G--AAA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2872 16 -      4390 ACGA-T-GGCC-GAT---G--AAA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392309 16 - 209938924 ATGA-T-GGCC-GAT---G--AAA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4478 16 +      5979 ACGA-T-GGCC-GAT---G--AAA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1048 16 -     22275 ATGA-T-GGCC-GAT---G--AAA
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8520 16 +     16473 ATGCAC-AATT-AAC---A--AA-
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109645 16 + 121099817 ATGA-T-AGAC-AAT---G--AAA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31212 16 -     47369 ATGA-T-AGAC-AAT---G--AAA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31598 16 -     79414 ATGA-T-AGAC-AAT---G--AAA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28289 16 -     34454 ATGA-T-AGAC-AAT---G--AAA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15690 16 -     22428 ATGA-T-AGAC-AAT---G--AAA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30844 16 -     47109 ATGA-T-AGAC-AAT---G--AAA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238890 16 +   5703754 ATAA-T-AGCC-AAT---G--AAA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8480 16 +     21866 ATAA-T-AGCC-AAT---G--AAA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116541 16 +    313613 ATGCAT-AATG-AAC---A--GA-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26195 16 +     27374 ATAA-T-AGCC-GAT---T--AAA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29707 16 +     58920 ATAA-T-AGCC-GAT---T--AAA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16205 16 -     45317 ATAA-T-AGCC-GAT---T--AAA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23863 16 -     42441 ATAA-T-AGCC-GAT---T--AAA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26541 16 -     29113 ATAA-T-AGCC-GAT---T--AAA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29616 16 -     48123 ATAA-T-AGCC-GAT---T--AAA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49870 10 +     77746 -------AG-C-AGC---A--AGG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864815 16 -   1910179 ATGCAC-AATC-AAC---A--AA-
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671922 15 +  18376816 ATGCAA-AGcc-aac---a--a--
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869030 17 +   3870691 CTATAC-AACT-AAC---A--AAA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7401 15 -     97271 AAG-AC-AATC-AAC---A--AA-
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125542 15 +    196729 ATGCAT-AATC-CA----A--AA-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644427 16 +  69701581 ACATAC-AATT-AAC---A--AA-
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391796 16 +   1523678 ATAA-C-AGCC-GAT---G--AAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14973 16 +     22964 GTGTAT-AATC-AAC---A--AA-
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3399 20 +      5583 ACGCAT-AACC-ACACACA-AAA-
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192280 16 +    199430 ATGCAC-AAAC-AAT---A--AA-
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106249 15 -    539355 ATGCAC-AAAC-AA----A--AA-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1315 13 +      9917 ACATAC-AACA-AAA---------
i Tarsius_lariang.k141_1733899                           C 0 I 3
s Tarsius_wallacei.k141_226975                                8113 13 +     20590 ACATAC-AACA-GAA---------
i Tarsius_wallacei.k141_226975                           C 0 I 3
s Theropithecus_gelada.CM009954.1                           354048 16 - 186847797 ATAA-T-AGCC-AAT---G--AAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24741 13 -     33621 A----T-AACT-GAC---G--AAA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20390 17 -     31044 ATGCAC-AACC-TCA---A-AAA-
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480800 15 -    610378 GTGCAC-AATT-AAC---A--A--
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21740 16 +     26378 ATAA-T-AGCC-GAT---T--AAA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34416 16 -     78344 ATAA-T-AGCC-GAT---T--AAA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21065 16 +     25722 ATAA-T-AGCC-GAT---T--AAA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29372 16 -     62838 ATAA-T-AGCC-GAT---T--AAA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29416 16 +     46913 ATAA-T-AGCC-GAT---T--AAA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10225 16 -     28527 ATAA-T-AGCC-GAT---T--AAA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31307 16 -     64340 ATAA-T-AGCC-GAT---T--AAA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29345 16 -     63452 ATAA-T-AGCC-GAT---T--AAA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10792 16 +     22490 ATAA-T-AGCC-GAT---T--AAA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4215 16 -      6147 ATAA-T-AGCC-GAT---T--AAA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11128 16 -     13050 ATAA-T-AGCC-GAT---T--AAA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256358 16 -   6242583 ATAA-T-AGCC-GAT---T--AAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2386 16 +     19340 ATAA-T-AGCC-GAT---T--AAA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174134 16 -    200418 ATGCAC-AATC-AAC---A--AA-
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6481763 16 -  10818551 ATGCAC-AACC-ACA---A--AA-
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835037 17 -   4065304 ATGCAT-GACC-AAG---A--AAA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9057 17 -     70247 ATGCAT-GACC-AAG---A--AAA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366380 16 -  33153633 ATGCAC-AGTG-AAT---A--AA-
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4268 14 -     21056 GT--AC-AATG-AGC---A--AA-
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182703 16 +   5085361 ATGAAC-AATC-AAC---A--AA-
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25913 17 -     30710 ACACAC-AGCC-AAC---A--AAA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24820 17 -    147434 ACACAC-AGCC-AAC---A--AAA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76960 16 +   5488506 ATGCAC-AAAT-AAC---A--AA-
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105628 16 -    112863 ATGCAC-AATC-AGC---A--AA-
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174816 16 -    224448 -TATGC-AACT-AAC---A--AAA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29736 16 -     86975 AGGAAC-AATC-AAC---A--AA-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       629 17 -      1899 GTACAC-AAAC-AAC---A--AAG
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 I 27
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1664 16 +      2126 ATGCAC-AATG-AAC---A--AA-
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15729  0 +     78924 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 44857  0 -     83289 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6102 2 +     36723 GT
s Acinonyx_jubatus.LLWD01001279.1                           813530 1 +   1699592 -G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Acomys_cahirinus.AcoCah_scaffold_21377                     25773 2 +     63021 CG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415983 1 +  29979442 -G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 2
s Ailurus_fulgens.LNAC01001112.1                            216328 1 +    347723 -G
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 2
s Allactaga_bullata.AllBul_scaffold_20030                    18712 2 -     61208 TG
i Allactaga_bullata.AllBul_scaffold_20030                I 31 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48747 2 +     53615 GT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           778 2 +     13857 GT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17329 2 -     21945 GT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19014 2 +     32033 GT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72848 2 -     84148 GT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45087 2 -     78289 GT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44526 2 +     55831 GT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42976 2 -     64179 GT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24610 2 -     24835 GT
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41601 2 +     45454 GT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47250 2 +     70886 GT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9423 2 +     30854 GT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33557 2 +     42133 GT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585981 1 +   2318259 -A
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      177778 1 -    412891 -A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_21030             51088 1 -     68529 -A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 2
s Aotus_azarae.k141_887050                                    1814 2 +     17741 GT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2439 2 -     15923 GT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672721 2 +   5030052 GT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2715 2 -     16391 GT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2274 2 -     17186 GT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16794 2 -     32367 GT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20887 2 -     45910 AT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6044 1 -     15198 -A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 3
s Ateles_geoffroyi_b.tarseq_1536                               275311 2 +  21539123 GT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11479 2 +     48076 GT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6614 2 -     28759 GT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34168 2 +     44353 GT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49539 2 -     71267 GT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23597 2 -     33135 GT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6889 2 +     11645 GT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6897 2 -     19611 GT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964132 1 -  23207421 -A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 2
s Balaenoptera_bonaerensis.DF411050.1                          632 1 -     25979 -A
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_7278                     86989 1 +    124022 -A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 2
s Bison_bison.KN261452.1                                     22531 1 +    288883 -A
i Bison_bison.KN261452.1                                 C 0 I 2
s Bos_indicus.CM003047.1                                  20356921 1 +  48749331 -A
i Bos_indicus.CM003047.1                                 C 0 I 2
s Bos_mutus.JH880303.1                                      755485 1 +   1948126 -A
i Bos_mutus.JH880303.1                                   C 0 I 2
s Bos_taurus.CM000203.6                                   27545627 1 -  45695690 -A
i Bos_taurus.CM000203.6                                  C 0 I 2
s Bubalus_bubalis.KI419123.1                               1530642 1 -   4408762 -A
i Bubalus_bubalis.KI419123.1                             C 0 I 2
s Cacajao_ayresi.k141_96119                                   8487 2 +     28062 GT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43781 2 -     91139 GT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21307 2 +     95584 GT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21220 2 +    119600 GT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10794 2 +     18648 AT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10329 2 -     13885 GT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2399 2 -      8861 AT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454791 2 + 189096842 AT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2314 2 +      8664 AT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631644 1 +  17673402 -A
i Camelus_bactrianus.KN276810.1                          C 0 I 2
s Camelus_dromedarius.KN272107.1                           4665931 1 +   7040546 -A
i Camelus_dromedarius.KN272107.1                         C 0 I 2
s Camelus_ferus.KB017975.1                                 1209590 1 +   1652518 -A
i Camelus_ferus.KB017975.1                               C 0 I 2
s CanFam4.chr16                                           42506013 1 +  60362399 -G
i CanFam4.chr16                                          C 0 I 2
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9649 1 -     23171 -G
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 2
s Canis_lupus_dingo.QKWQ01000480.1                          222992 1 +   9314153 -G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 2
s Canis_lupus_familiaris.chr16                            41616127 1 +  59632846 -G
i Canis_lupus_familiaris.chr16                           C 0 I 2
s Canis_lupus_orion.HG994398.1                            45107708 1 -  63665305 -G
i Canis_lupus_orion.HG994398.1                           C 0 I 2
s Capra_aegagrus.CM003241.1                               27409710 1 -  46296322 -A
i Capra_aegagrus.CM003241.1                              C 0 I 2
s Capra_hircus.CM004588.1                                 26591984 1 +  44709034 -A
i Capra_hircus.CM004588.1                                C 0 I 2
s Capromys_pilorides.CapPil_scaffold_762519                    160 2 -      1607 AT
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271099 2 +    496798 gt
i Carlito_syrichta.NW_007259797.1                        I 3 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                900 1 +      9923 -A
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 3
s Castor_canadensis.CasCan_scaffold_39952                    28302 2 -     39886 GT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80186 1 -    217609 -A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 2
s Cavia_aperea.AVPZ01000300.1                              4997030 2 +  23392119 GT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000471 2 +  23407841 GT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63552 2 -     66877 GT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5712 2 -     12580 AT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43769 2 +     53515 AT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373532 2 -  26074798 GT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8586 2 -     34880 GT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67682 2 -     89041 GT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3059 2 -      5494 GT
i Cephalopachus_bancanus.k141_1689090                    I 3 C 0
s Ceratotherium_simum.JH767749.1                          15492811 1 -  27778364 -A
i Ceratotherium_simum.JH767749.1                         C 0 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19644 1 +     27315 -A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 2
s Cercocebus_atys.KQ010504.1                                141896 2 -   4669795 GT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45640 2 +     47900 GT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1068 2 -     14410 GT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45452 2 -    148725 GT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27661 2 -     40656 GT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7625 2 +     20796 GT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12743 2 -     17524 GT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28466 2 -     34525 GT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12246 2 -     25376 GT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364833 2 -  39242232 GT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270560 2 +  21565898 GT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32928 2 -     45857 GT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27829 2 -     32606 GT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3991 2 +      8499 GT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26387 2 +     70610 GT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23348 2 +     36323 GT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13328 1 -     19938 -T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31263 2 -     33796 GT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5777 2 -     15404 GT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9587 2 -     32913 GT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20000 2 -     40346 GT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20255 2 +    216457 GT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20048 2 +     39636 GT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239395 2 -   2543920 GT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4643 2 +      5346 GT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43118 2 -    112038 GT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8669 2 +     34062 GT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344249 2 +  18827391 GT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10793 2 -     44032 GT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305574 2 - 135778131 GT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15459 1 +     15858 -T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607034 1 -    839153 -T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2148 1 +      2406 -T
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409979 2 -   2368649 GT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379860 2 - 200372422 GT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3417 2 -     84244 GT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807881 1 +  53390261 -a
i Condylura_cristata.JH655891.1                          C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3412 1 -      8242 -A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 2
s Cricetulus_griseus.LT883664.1                          213115488 2 - 224834208 TA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10005 1 +     12657 -A
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4984 1 +     87169 -G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Ctenodactylus_gundi.CteGun_scaffold_65                    646039 2 -   1526836 GT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18948 2 +     50838 AT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4956 2 +     36344 GT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28732 2 +     75252 GT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110679 1 -   2246927 -T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293199 2 +  12879189 GT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632540 1 -  35494412 -A
i Delphinapterus_leucas.KZ290073.1                       C 0 I 2
s Desmodus_rotundus.KZ672366.1                              331095 1 -   2620052 -A
i Desmodus_rotundus.KZ672366.1                           C 0 n 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665095 1 -   1390856 -A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 2
s Diceros_bicornis.DicBicMic_scaffold_5955                  139888 1 -    198055 -A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 2
s Dinomys_branickii.DinBra_scaffold_10381                    99480 2 -    115145 GT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951198 2 -  37912305 AT
i Dipodomys_ordii.KN672350.1                             I 4 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6124 2 -     10735 AT
i Dipodomys_stephensi.DipSte_scaffold_89095              I 4 C 0
s Echinops_telfairi.JH980293.1                            62856174 1 - 111700974 -C
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6875 1 +     19438 -G
i Eidolon_helvum.AWHC01266696.1                          C 0 I 2
s Elaphurus_davidianus.JRFZ01104969.1                       240351 1 -    607251 -A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 2
s Elephantulus_edwardii.JH947257.1                         1226374 1 +  10337057 -T
i Elephantulus_edwardii.JH947257.1                       C 0 I 3
s Ellobius_lutescens.LOEQ01008920.1                          31630 2 +    110024 TT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13601 2 +     18970 TT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916734 1 +  41312741 -G
i Enhydra_lutris.KZ291758.1                              C 0 I 2
s Eptesicus_fuscus.JH977646.1                             12579517 1 +  14770903 -A
i Eptesicus_fuscus.JH977646.1                            C 0 I 2
s Equus_asinus.JREZ01000139.1                              3042016 1 -   4378816 -A
i Equus_asinus.JREZ01000139.1                            C 0 I 2
s Equus_caballus.CM000403.2                               21375954 1 +  39960074 -A
i Equus_caballus.CM000403.2                              C 0 I 2
s Equus_przewalskii.KK951119.1                              411861 1 -    498745 -A
i Equus_przewalskii.KK951119.1                           C 0 I 2
s Erinaceus_europaeus.JH835339.1                           3666659 1 +   7059049 -a
i Erinaceus_europaeus.JH835339.1                         C 0 I 2
s Erythrocebus_patas.Contig38                               263785 2 +  21539334 GT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71746 1 -    133382 -A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_705718              322 1 +       377 -A
i Eubalaena_japonica.EubJap_flattened_line_705718        C 0 I 2
s Eulemur_albifrons.k141_51491                               15404 2 -     24895 GT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43114 2 -     70999 GT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87084 2 +    112731 GT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43646 2 +     68309 GT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53971 2 -     65740 GT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24603 2 -     75513 GT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48798 2 -     97555 GT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5522 2 +     30972 GT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43242 2 -     52037 GT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59645 2 -    111500 GT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247439 1 - 206538554 -G
i Felis_catus.CM001381.2                                 C 0 I 2
s Felis_catus_fca126.CM031415.1                          185117225 1 - 205367284 -G
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_31944                 28323 1 -     30238 -G
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 2
s Fukomys_damarensis.KN121974.1                            2922601 2 -   3816255 GT
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126255 2 -    137831 GT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9800 2 +     22493 GT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21870 2 -     32986 GT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1774 2 -     28519 GT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92054 1 -     95226 -A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 2
s Glis_glis.GliGli_scaffold_33859                            35090 2 -     36801 GT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6402 2 -      8343 GT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255417 2 - 186649187 GT
i Gorilla_gorilla.LT578341.1                             I 16 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2572 2 -     78134 GT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15333 2 -     40692 GT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36735 2 +     49394 GT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61603 2 -     66874 GT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10477 2 -     42923 GT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17476 2 -     53142 GT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31416 1 -    327341 -G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9728 1 +     48891 -A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 2
s Heterocephalus_glaber.JH602082.1                         1933014 2 -  22651954 GT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                 264 1 +      8654 -C
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8241 1 -     36432 -A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                      1552233 1 -   1711038 -A
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_164997               1671 1 -      2730 -A
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 2
s Hoolock_leuconedys.ctg274                                    143426 2 -    630532 GT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70581 1 +     83186 -G
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 2
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72476 2 +    143317 GT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6460 2 +     12352 GT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13644 2 +     55766 GT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053244 2 + 191637585 GT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802122 2 +  11177569 GT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7763 2 -    135385 TT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387469 2 +   7955117 GT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3033 2 +     11955 GT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10641 1 -     16823 -A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 2
s Jaculus_jaculus.JH725527.1                               1240490 2 +   9596543 TG
i Jaculus_jaculus.JH725527.1                             I 30 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72481 1 -     97402 -A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 2
s Lagothrix_lagothricha.k141_246028                          43862 2 +    110728 GT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63498 1 -     65777 -A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 2
s Lemur_catta.scaffold_24                                 14760126 2 +  30322482 GT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4767 2 -     13097 GT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4521 2 +      5940 GT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4344 2 -      5717 GT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10734 2 -     11567 GT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12115 2 -     12945 GT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9638 2 +     29618 GT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9634 2 +     31569 GT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9644 2 +     24756 GT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9644 2 +     16388 GT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814116 1 -   3914936 -G
i Leptonychotes_weddellii.KB714746.1                     C 0 I 2
s Lepus_americanus.LepAme_scaffold_56121                     18486 2 +     24238 GT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341826 1 +    662738 -a
i Lipotes_vexillifer.KE559953.1                          C 0 I 2
s Lophocebus_aterrimus.ctg367                               334781 2 -   1826925 GT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11953 2 +     19643 AT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045623 2 -   6120653 AT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085037 1 +  43346337 -T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615282 1 +  59628241 -G
i Lycaon_pictus.CM007581.1                               C 0 I 2
s Macaca_arctoides.k141_1757516                              46170 2 -     61512 GT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373832 2 -  60120075 GT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26100 2 +     30207 GT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             938 2 -      5035 GT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26053 2 +     30527 GT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37229 2 -     50087 GT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46973 2 +     51645 GT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416176 2 - 187317192 GT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400406 2 +  25927173 GT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49578 2 -     62418 GT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2109 2 +     14901 GT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46050 2 +     59329 GT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271958 2 +    668171 GT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   596 2 -      5049 GT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3756 2 +     17132 GT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223842 1 -    270270 -A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 2
s Mandrillus_leucophaeus.scaffold280                        323246 2 +  24302211 GT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358077 2 -    752769 GT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674169 1 -    737560 -A
i Manis_javanica.JSZB01003497.1                          C 0 I 2
s Manis_pentadactyla.KN006162.1                             221465 1 +    317179 -A
i Manis_pentadactyla.KN006162.1                          C 0 I 2
s Marmota_marmota.CZRN01000018.1                           7501687 2 +  40650429 GT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151011 1 +    207569 -A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_19308             26833 1 -     74585 -G
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 2
s Meriones_unguiculatus.MerUng_scaffold_7390                 50801 2 -    140813 TG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429868 2 +  29670104 TA
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88110 1 +     93471 -A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 2
s Mico_argentatus.k141_582562                                10901 2 +     17804 AT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11401 2 -     12984 AT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19717 2 -     26561 AT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985476 2 +  93316391 GT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47409 1 +    145209 -G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185697 1 +    200668 -A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 3
s Microtus_ochrogaster.CM001695.1                         15963075 2 +  27267610 TT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363854 1 -   8254450 -A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_23309             42761 1 -     48117 -A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 2
s Miopithecus_ogouensis.k141_1534655                         23280 2 -     27822 GT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9127 1 +     27589 -G
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 2
s Mirza_zaza.k141_766280                                     53259 2 -     62432 GT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360215 1 +    437263 -A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179929 1 +    366855 -A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Moschus_moschiferus.MosMos_scaffold_13123                  26176 1 -     82753 -A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19141 1 -     63510 -G
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 2
s Murina_feae.MurFea_scaffold_17764                          39820 1 +     47283 -C
i Murina_feae.MurFea_scaffold_17764                      C 0 I 2
s Mus_caroli.LT608237.1                                   35593783 2 + 120012414 TG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688172 2 + 129401213 TG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497466 2 + 130317789 TG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84128 2 -     86153 GC
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355755 1 +  14710649 -G
i Mustela_putorius.JH418006.1                            C 0 I 2
s Myocastor_coypus.MyoCoy_scaffold_15261                     63731 2 +     67721 AT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794076 1 +  10118263 -A
i Myotis_brandtii.KE162005.1                             C 0 I 2
s Myotis_davidii.KB100139.1                                4388249 1 +   6019432 -A
i Myotis_davidii.KB100139.1                              C 0 I 2
s Myotis_lucifugus.GL429869.1                               384037 1 +   4330536 -A
i Myotis_lucifugus.GL429869.1                            C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_66571                         3070 1 +     18357 -A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120428 1 +    130748 -A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947356 2 +   3037898 TG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29936 2 +     34575 GT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232881 1 -   7148211 -A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 2
s Nomascus_annamensis.k141_1771965                           54352 2 -    132029 GT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10447 2 -     16345 GT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16332 2 +     22201 GT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414553 2 -  22158432 GT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26730 2 -     54323 GT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198878 1 +   9404916 -G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 2
s Nycticebus_bengalensis.LG01                             93638852 2 + 196305487 AT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1455 2 -      9413 AT
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566235 2 - 199412804 AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557540 2 -   3988456 GA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055687 2 -  11899542 AT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452544 1 +   2017862 -G
i Odobenus_rosmarus.KB229312.1                           C 0 I 2
s Odocoileus_virginianus.KZ100018.1                         436944 1 -    630418 -A
i Odocoileus_virginianus.KZ100018.1                      C 0 I 2
s Okapia_johnstoni.LVCL01S0005463.1                          15138 1 +    150152 -A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 2
s Ondatra_zibethicus.OndZib_scaffold_7387                    93427 2 -    140218 TT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4296 2 -     41509 TG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103283 1 +  10937097 -A
i Orcinus_orca.KB316932.1                                C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_201229                329 1 +     11607 -T
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104280 2 - 174332312 GT
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 9
s Otocyon_megalotis.JAEUCK010005147.1                        39923 1 +    559221 -G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 2
s Otolemur_crassicaudatus.k141_649260                        41403 2 -     51505 GT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354406 2 +   1103335 GT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404848 1 -  44047080 -A
i Ovis_aries.CM001607.2                                  C 0 I 2
s Ovis_canadensis.OviCan_scaffold_67953                       5367 1 +     17875 -A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 2
s Pan_troglodytes.CM009242.2                               1473446 2 - 189151597 GT
i Pan_troglodytes.CM009242.2                             C 0 I 69
s Panthera_onca.PanOnc_flattened_line_3271                   25146 1 -    230217 -G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                              18462472 1 -  18783137 -G
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               3973131 1 +   8748460 -G
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1616376 1 +   2937107 -A
i Pantholops_hodgsonii.KE114653.1                        C 0 I 2
s Papio_anubis.CM001495.2                                   244078 2 - 183742232 GT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10540 2 +     21308 GT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293113 2 -  20919399 GT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23188 2 -     27687 GT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16334 2 +     16796 GT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23145 2 -     23640 GT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27733 2 +     31479 AT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20101 2 -     24908 AT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2555 2 +      9367 AT
i Perognathus_longimembris.PerPac_flattened_line_89005   I 4 C 0
s Peromyscus_maniculatus.KI615324.1                         247506 2 +  18517816 TG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32580 2 -     56120 GT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4809 1 -     63832 -A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 2
s Piliocolobus_badius.k141_2704958                            3367 2 +     55023 GT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2905 2 -     89929 GT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3495 2 +     40849 GT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255170 2 +  14605196 GT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4666 1 +     22231 -A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 2
s Pithecia_albicans.k141_1239476                             65485 2 +    207309 GT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6577 2 -     25401 GT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32321 2 +     58159 GT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32597 2 +     63561 GT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32357 2 +     51148 GT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557327 2 -   4542175 GT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32341 2 +     51125 GT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1826 1 +     19503 -A
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 2
s Plecturocebus_bernhardi.k141_2549090                        8752 2 +     39866 GT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3834 2 -      9282 GT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43238 2 -     87950 GT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43634 2 -     88961 GT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8330 2 -     39403 GT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43281 2 +     87928 GT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8329 2 -     60166 GT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15266 2 -     67232 GT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43182 2 -     90634 GT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44649 2 +     89403 GT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178556 2 - 189387572 GT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193373 2 -   9816681 GT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28516 2 +     69807 GT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45697 2 -     80239 GT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 4254 1 +      7663 -C
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983274 2 +   4620579 GT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566784 2 -   2598838 GT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4422 2 -      7103 GT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5019 2 -     11706 GT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8757 2 -     30655 GT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35070 2 +     46564 GT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95349 2 -     98465 GT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8988 2 +     35169 GT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38102 2 +     52041 TG
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52822 1 -     66298 -A
i Pteronotus_parnellii.KE847780.1                        C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5329 1 -     18639 -G
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 2
s Pteropus_alecto.KB030862.1                               5841415 1 -  28871421 -A
i Pteropus_alecto.KB030862.1                             C 0 I 2
s Pteropus_vampyrus.KN525825.1                             3537930 1 -   4952924 -A
i Pteropus_vampyrus.KN525825.1                           C 0 I 2
s Puma_concolor.QAVW01001104.1                            18099788 1 +  38429054 -G
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                             27885 2 +     91421 GT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154369 2 -   7812017 GT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8742 2 +     72585 GT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53861 1 +     55069 -A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 2
s Rattus_norvegicus.chr16                                 37023600 2 -  90668790 TG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915395 1 +   3329780 -A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 2
s Rhinopithecus_bieti.k119_778604                             2470 2 +      7119 GT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123086 2 + 195417433 GT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237312 2 -   7961872 GT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75914 1 -    116970 -A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 2
s Saguinus_bicolor.k141_1429097                               4641 2 +     27962 GT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4535 2 +      6077 GT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4625 2 +      5971 GT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4546 2 +      5932 GT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2888 2 -      4390 GT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392325 2 - 209938924 GT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4494 2 +      5979 GT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1064 2 -     22275 GT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8536 1 +     16473 -A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 2
s Saimiri_boliviensis.NW_024100920.1                       1109661 2 + 121099817 GT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31228 2 -     47369 GT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31614 2 -     79414 GT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28305 2 -     34454 GT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15706 2 -     22428 GT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30860 2 -     47109 GT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238906 2 +   5703754 GT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8496 2 +     21866 GT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116557 1 +    313613 -A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 2
s Semnopithecus_entellus.k141_158471                         26211 2 +     27374 GT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29723 2 +     58920 GT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16221 2 -     45317 GT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23879 2 -     42441 GT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26557 2 -     29113 GT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29632 2 -     48123 GT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49880 2 +     77746 TG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864831 1 -   1910179 -A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671937 1 +  18376816 -a
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869047 2 +   3870691 GT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7416 1 -     97271 -G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 2
s Suricata_suricatta.SurSur_flattened_line_6629             125557 1 +    196729 -G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                    6644443 1 +  69701581 -A
i Sus_scrofa.CM000828.4                                  C 0 I 2
s Symphalangus_syndactylus.tarseq_199                       391812 2 +   1523678 GT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14989 1 +     22964 -A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_224794                3419 1 +      5583 -A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192296 1 +    199430 -A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    106264 1 -    539355 -A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 2
s Tarsius_lariang.k141_1733899                                1331 2 +      9917 GC
i Tarsius_lariang.k141_1733899                           I 3 C 0
s Tarsius_wallacei.k141_226975                                8129 2 +     20590 AC
i Tarsius_wallacei.k141_226975                           I 3 C 0
s Theropithecus_gelada.CM009954.1                           354064 2 - 186847797 GT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24754 2 -     33621 GT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20407 1 -     31044 -T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480815 1 -    610378 -A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_1189070                        21756 2 +     26378 GT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34432 2 -     78344 GT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21081 2 +     25722 GT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29388 2 -     62838 GT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29432 2 +     46913 GT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10241 2 -     28527 GT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31323 2 -     64340 GT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29361 2 -     63452 GT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10808 2 +     22490 GT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4231 2 -      6147 GT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11144 2 -     13050 GT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256374 2 -   6242583 GT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2402 2 +     19340 GT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174150 1 -    200418 -A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 2
s Trichechus_manatus.JH594705.1                            6481779 1 -  10818551 -T
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835054 2 -   4065304 GG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9074 2 -     70247 GG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366396 1 -  33153633 -A
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_46687                    4282 1 -     21056 -T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 2
s Ursus_maritimus.KK499267.1                                182719 1 +   5085361 -G
i Ursus_maritimus.KK499267.1                             C 0 I 2
s Varecia_rubra.k141_787544                                  25930 2 -     30710 GT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24837 2 -    147434 GT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76976 1 +   5488506 -A
i Vicugna_pacos.KN270157.1                               C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_12041                105644 1 -    112863 -G
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 2
s Xerus_inauris.XerIna_scaffold_2302                        174832 2 -    224448 GT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29752 1 -     86975 -G
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_286923                       673 2 -      1899 TG
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 27 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1680 1 +      2126 -A
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 I 2
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15729 0 +     78924 C
e Noctilio_leporinus.NocLep_scaffold_7894                   128885 0 -    149072 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 44857 0 -     83289 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6104 20 +     36723 GGATGT-AAC-T--GCA----AA-T-C-AAA
s Acinonyx_jubatus.LLWD01001279.1                           813533 20 +   1699592 AGATGT-AAC-T--GCA----TG-T-C-AAG
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25775 15 +     63021 GGGTGT-GAT-T--AAG----AA--------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 29
s Ailuropoda_melanoleuca.LNAT01000098.1                   20415986 20 +  29979442 AGATGT-AAC-T--ACG----TA-T-C-AAG
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 2 C 0
s Ailurus_fulgens.LNAC01001112.1                            216331 20 +    347723 AAATGT-AAC-T--ACA----CA-T-C-AAG
i Ailurus_fulgens.LNAC01001112.1                         I 2 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18714 20 -     61208 GAACAC-AAT-T--ATA----AA-T-C-AAA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48749 20 +     53615 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           780 20 +     13857 GGATGT-AAC-T--GCA----AC-T-C-GAA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17331 20 -     21945 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19016 20 +     32033 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72850 20 -     84148 GGATGA-AAC-T--GCA----GA-T-C-AAA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45089 20 -     78289 GGATGA-AAC-T--GCA----GA-T-C-AAA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44528 20 +     55831 AGGTGA-AAC-T--GCA----GA-T-C-AAA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42978 20 -     64179 GGATGA-AAC-T--GCA----GA-T-C-AAA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24612 20 -     24835 GGATGA-AAC-T--GCA----GA-T-C-AAA
i Alouatta_macconnelli.k141_361275                       C 0 C 0
s Alouatta_nigerrima.k141_376068                             41603 20 +     45454 GGATGA-AAC-T--GCA----GA-T-C-AAA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47252 20 +     70886 GGATAA-AAC-T--GCA----CA-T-C-AAA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9425 20 +     30854 GGATGA-AAC-T--GCA----GA-T-C-AAA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33559 20 +     42133 GGATGA-AAC-T--GCA----GA-T-C-AAA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1585984 20 +   2318259 AGACAC-AAC-T--GCA----AA-T-C-AAG
i Ammotragus_lervia.NIVO01071767.1                       I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177782 20 -    412891 AGATGT-AAC-T--TCA----AG-T-C-AAG
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51091 20 -     68529 AGACAT-AAC-T--GCA----AA-T-C-AAG
i Antilocapra_americana.AntAmePen_scaffold_21030         I 2 C 0
s Aotus_azarae.k141_887050                                    1816 20 +     17741 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2441 20 -     15923 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672723 20 +   5030052 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2717 20 -     16391 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2276 20 -     17186 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16796 18 -     32367 GA--GT-AAC-T--ACA----TA-T-C-AAG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 25
s Arctocebus_calabarensis.k141_1364444                       20889 21 -     45910 GAATAA-AAC-T--GCA----AAAT-C-AAG
i Arctocebus_calabarensis.k141_1364444                   C 0 I 6
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6048 20 -     15198 AGATGA-AAC-T--TCA----AA-T-C-AAG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 3 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275313 20 +  21539123 GGATAA-AAC-T--GCA----AA-T-C-AAA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11481 20 +     48076 GGATAA-AAC-T--GCA----AA-T-C-AAA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6616 20 -     28759 GGATAA-AAC-T--GCA----AA-T-C-AAA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34170 20 +     44353 GGATAA-AAC-T--GCA----AA-T-C-AAA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49541 20 -     71267 GGATAA-AAC-T--GCA----AA-T-C-AAA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23599 20 -     33135 GGATAA-AAC-T--GCA----AA-T-C-AAA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6891 20 +     11645 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6899 20 -     19611 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964135 20 -  23207421 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Balaenoptera_acutorostrata.KI537508.1                  I 2 C 0
s Balaenoptera_bonaerensis.DF411050.1                          635 20 -     25979 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Balaenoptera_bonaerensis.DF411050.1                    I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     86992 20 +    124022 AGACAT-AAC-T--GCA----AA-T-C-AAG
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 2 C 0
s Bison_bison.KN261452.1                                     22534 20 +    288883 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Bison_bison.KN261452.1                                 I 2 C 0
s Bos_indicus.CM003047.1                                  20356924 20 +  48749331 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Bos_indicus.CM003047.1                                 I 2 C 0
s Bos_mutus.JH880303.1                                      755488 20 +   1948126 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Bos_mutus.JH880303.1                                   I 2 C 0
s Bos_taurus.CM000203.6                                   27545630 20 -  45695690 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Bos_taurus.CM000203.6                                  I 2 C 0
s Bubalus_bubalis.KI419123.1                               1530645 20 -   4408762 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Bubalus_bubalis.KI419123.1                             I 2 C 0
s Cacajao_ayresi.k141_96119                                   8489 20 +     28062 GGACAT-AAC-T--GCA----AA-T-C-AAA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43783 20 -     91139 GGACAA-AAC-T--GCA----AA-T-C-AAA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21309 20 +     95584 GGACAT-AAC-T--GCA----AA-T-C-AAA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21222 20 +    119600 GGACAT-AAC-T--GCA----AA-T-C-AAA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10796 20 +     18648 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10331 19 -     13885 GGATAT-AAC-T--GA-----GA-T-C-AAA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2401 20 -      8861 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454793 20 + 189096842 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2316 20 +      8664 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631647 20 +  17673402 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Camelus_bactrianus.KN276810.1                          I 2 C 0
s Camelus_dromedarius.KN272107.1                           4665934 20 +   7040546 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Camelus_dromedarius.KN272107.1                         I 2 C 0
s Camelus_ferus.KB017975.1                                 1209593 20 +   1652518 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Camelus_ferus.KB017975.1                               I 2 C 0
s CanFam4.chr16                                           42506016 20 +  60362399 AAATGT-AAC-T--ACA----TA-T-C-AAG
i CanFam4.chr16                                          I 2 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9652 20 -     23171 AAATGT-AAC-T--ACA----TA-T-C-AAG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 2 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          222995 20 +   9314153 AAATGT-AAC-T--ACA----TA-T-C-AAG
i Canis_lupus_dingo.QKWQ01000480.1                       I 2 C 0
s Canis_lupus_familiaris.chr16                            41616130 20 +  59632846 AAATGT-AAC-T--ACA----TA-T-C-AAG
i Canis_lupus_familiaris.chr16                           I 2 C 0
s Canis_lupus_orion.HG994398.1                            45107711 20 -  63665305 AAATGT-AAC-T--ACA----TA-T-C-AAG
i Canis_lupus_orion.HG994398.1                           I 2 C 0
s Capra_aegagrus.CM003241.1                               27409713 20 -  46296322 AGACAC-AAC-T--GCA----AA-T-C-AAG
i Capra_aegagrus.CM003241.1                              I 2 C 0
s Capra_hircus.CM004588.1                                 26591987 20 +  44709034 AGACAC-AAC-T--GCA----AA-T-C-AAG
i Capra_hircus.CM004588.1                                I 2 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    162 21 -      1607 GTATGT-AAC-T--ACA----AA-TCC-AAG
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271101 20 +    496798 ggaTGT-AAC-T--GCA----AT-T-C-AAG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                904 20 +      9923 AGATGG-AAC-T--TCA----AG-T-C-AAG
i Carollia_perspicillata.CarPer_scaffold_107871          I 3 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28304 20 -     39886 GGATGT-AAT-T--ACA----AA-T-C-AAG
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80189 20 -    217609 AGACAT-AAC-T--GCA----AA-T-C-AAG
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 C 0
s Cavia_aperea.AVPZ01000300.1                              4997032 20 +  23392119 GTATGT-AAT-T--ACA----GA-T-G-AAG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000473 20 +  23407841 GTATGT-AAT-T--ACA----GA-T-G-AAG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63554 20 -     66877 GTATGT-AAT-T--ACA----GA-T-G-AAG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5714 20 -     12580 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43771 20 +     53515 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373534 20 -  26074798 GGATGT-AAC-T--GCA----GA-T-C-AAA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8588 20 -     34880 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67684 20 -     89041 GGATGT-AAC-T--GCA----GA-T-C-AAA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3061 20 -      5494 GGATGT-AAC-T--GCA----AT-T-C-AAG
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492814 20 -  27778364 TGATGT-AAC-T--GCA----AA-T-C-AAA
i Ceratotherium_simum.JH767749.1                         I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19647 20 +     27315 TGATGT-AAC-T--GCA----AA-T-C-AAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 2 C 0
s Cercocebus_atys.KQ010504.1                                141898 20 -   4669795 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45642 20 +     47900 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1070 20 -     14410 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45454 20 -    148725 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27663 20 -     40656 GGATAT-AAC-T--GCA----AC-T-C-CAA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7627 20 +     20796 GGATAT-AAC-T--GCA----TC-T-C-GAA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12745 20 -     17524 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28468 20 -     34525 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12248 20 -     25376 GGATAT-AAC-T--GCA----AC-T-T-GAA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364835 20 -  39242232 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270562 20 +  21565898 GGATAT-AAC-T--GCA----AC-T-T-GAC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32930 20 -     45857 GGATAT-AAC-T--GCA----AC-T-T-GAA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27831 20 -     32606 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         3993 20 +      8499 GGCTAT-AAC-T--GCA----AC-T-T-GAA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26389 20 +     70610 GGATAT-AAC-T--GCA----AC-T-T-GAA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23350 20 +     36323 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13329 20 -     19938 AGATGG-AAC-T--GCA----GA-T-C-GAG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31265 20 -     33796 GGATAT-AAC-T--GTA----AA-T-C-AAG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5779 20 -     15404 GGATAT-AAC-T--GTA----AA-T-C-AAG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9589 20 -     32913 GGATAT-AAC-T--GCA----AA-T-C-AAA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20002 20 -     40346 GGATAT-AAC-T--GCA----AA-C-C-AAA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20257 20 +    216457 GGATAT-AAC-T--GCA----AA-C-C-AAA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20050 20 +     39636 GGATAT-AAC-T--GCA----AA-C-C-AAA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239397 20 -   2543920 GTATAT-AAC-T--ACA----AA-T-C-AAG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4645 20 +      5346 GGATAT-AAC-T--GAA----GA-T-C-AAA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43120 20 -    112038 GGACAT-AAC-T--GCA----AA-C-C-AAA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8671 20 +     34062 GGACAT-AAC-T--GCA----AA-C-C-AAA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344251 20 +  18827391 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10795 20 -     44032 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305576 20 - 135778131 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15460 20 +     15858 AGAAGT-AGC-T--GTC----AG-T-C-GAG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607035 20 -    839153 AGAAGT-AGC-T--GTC----AA-T-C-GAG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2149 20 +      2406 AAATAT-AAC-T--GCA----CA-T-T-GAG
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             409981 20 -   2368649 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379862 20 - 200372422 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3419 20 -     84244 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807884 20 +  53390261 tcatat-aac-t--aCA----AA-T-C-AAG
i Condylura_cristata.JH655891.1                          I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3415 20 -      8242 AGATGT-AAC-T--GCA----AA-C-C-AAG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 2 C 0
s Cricetulus_griseus.LT883664.1                          213115490 15 - 224834208 GGATGT-GATTT---AA----AA--------
i Cricetulus_griseus.LT883664.1                          C 0 I 29
s Crocidura_indochinensis.CroInd_scaffold_77846              10006 19 +     12657 A-CTCT-GAC-T--GCA----AG-T-C-AAG
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 23
s Cryptoprocta_ferox.CryFer_flattened_line_16129              4987 20 +     87169 AGATGT-AAC-T--GCA----TG-T-C-AAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646041 19 -   1526836 GG-TGC-AAC-T--ACG----AA-T-C-AAG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18950 20 +     50838 GTATGT-AAC-T--ACA----AA-T-C-AAG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4958 20 +     36344 GTATGT-AAC-T--ATG----AA-T-C-AAG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28734 20 +     75252 GTATGT-AAC-T--AGG----CA-T-C-ACG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110680 20 -   2246927 AGATGG-AAC-T--ACA----AA-T-G-GAG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293201 20 +  12879189 GCATAT-AAC-T--GTA----AA-T-C-AAG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632543 20 -  35494412 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Delphinapterus_leucas.KZ290073.1                       I 2 C 0
s Desmodus_rotundus.KZ672289.1                            11865971 20 -  20541912 agaTGT-AAC-T--TCA----AG-T-T-AAG
i Desmodus_rotundus.KZ672289.1                           I 422 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665098 20 -   1390856 TGATGT-AAC-T--GCA----AA-T-C-AAA
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139891 20 -    198055 TGATGT-AAC-T--GCA----AA-T-C-AAA
i Diceros_bicornis.DicBicMic_scaffold_5955               I 2 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99482 20 -    115145 GTATAT-AAC-T--GCA----AA-T-G-AAA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951200 18 -  37912305 GCATAT-AAC-T--ACA----AT-A-C-A--
i Dipodomys_ordii.KN672350.1                             C 0 I 2
s Dipodomys_stephensi.DipSte_scaffold_89095                   6126 19 -     10735 GCATAT-AAC-T--ACA----AT-A-C-AT-
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 7
s Echinops_telfairi.JH980293.1                            62856175 20 - 111700974 AACTGT-AAC-T--ACA----AA-T-T-GTG
i Echinops_telfairi.JH980293.1                           C 0 I 8
s Eidolon_helvum.AWHC01266696.1                               6878 19 +     19438 AGATGT-AA--T--GCA----AA-T-C-AAG
i Eidolon_helvum.AWHC01266696.1                          I 2 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240354 20 -    607251 AGACAT-AAC-T--GCA----AA-T-C-AAG
i Elaphurus_davidianus.JRFZ01104969.1                    I 2 C 0
s Elephantulus_edwardii.JH947257.1                         1226378  5 +  10337057 ------------------------T-T-GAG
i Elephantulus_edwardii.JH947257.1                       I 3 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31632 18 +    110024 GGATGT-GATTTTCAAA----AA--------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 4
s Ellobius_talpinus.LOJH01026522.1                           13603 18 +     18970 GGATgc-gattttaaaa----aa--------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 4
s Enhydra_lutris.KZ291758.1                               24916737 20 +  41312741 AAATGT-AAC-T--ACA----TA-T-C-AAG
i Enhydra_lutris.KZ291758.1                              I 2 C 0
s Eptesicus_fuscus.JH977646.1                             12579520 20 +  14770903 AGATGT-AAC-T--TCA----AG-T-C-AAG
i Eptesicus_fuscus.JH977646.1                            I 2 C 0
s Equus_asinus.JREZ01000139.1                              3042019 20 -   4378816 TGATGT-AAC-T--ACC----AA-T-C-AAA
i Equus_asinus.JREZ01000139.1                            I 2 C 0
s Equus_caballus.CM000403.2                               21375957 20 +  39960074 TGTTGT-AAC-T--ACC----AA-T-C-AAA
i Equus_caballus.CM000403.2                              I 2 C 0
s Equus_przewalskii.KK951119.1                              411864 20 -    498745 TGTTGT-AAC-T--ACC----AA-T-C-AAA
i Equus_przewalskii.KK951119.1                           I 2 I 75
s Erinaceus_europaeus.JH835339.1                           3666662 20 +   7059049 aaatgt-aac-t--gAA----AA-G-C-AAA
i Erinaceus_europaeus.JH835339.1                         I 2 C 0
s Erythrocebus_patas.Contig38                               263787 20 +  21539334 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71749 20 -    133382 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_705718              325 20 +       377 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Eubalaena_japonica.EubJap_flattened_line_705718        I 2 N 0
s Eulemur_albifrons.k141_51491                               15406 20 -     24895 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43116 20 -     70999 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87086 20 +    112731 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43648 20 +     68309 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53973 20 -     65740 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24605 20 -     75513 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48800 20 -     97555 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5524 20 +     30972 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43244 20 -     52037 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59647 20 -    111500 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247442 20 - 206538554 AGATGT-AAC-T--GCA----TG-T-C-AAG
i Felis_catus.CM001381.2                                 I 2 C 0
s Felis_catus_fca126.CM031415.1                          185117228 20 - 205367284 AGATGT-AAC-T--GCA----TG-T-C-AAG
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28326 20 -     30238 AGATGT-AAC-T--GCA----TG-T-C-AAC
i Felis_nigripes.FelNig_flattened_line_31944             I 2 C 0
s Fukomys_damarensis.KN121974.1                            2922603 20 -   3816255 GTATGA-AAC-T--ACA----AA-T-C-AAC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126257 21 -    137831 GAATAT-AAC-T--GCA----AAAT-C-AAG
i Galago_moholi.ctg3793                                  C 0 I 6
s Galago_senegalensis.k141_991736                             9802 21 +     22493 GAATAT-AAC-T--GCA----AAAT-C-AAG
i Galago_senegalensis.k141_991736                        C 0 I 6
s Galagoides_demidoff.k141_561628                            21872 21 -     32986 GAATAT-AAC-T--GCA----AAAT-C-AAG
i Galagoides_demidoff.k141_561628                        C 0 I 6
s Galeopterus_variegatus.GalVar_scaffold_51812                1776 20 -     28519 GGATGT-AAC-T--GCA----AA-T-C-AAG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92057 20 -     95226 AGACAT-AAC-T--GCA----AA-T-C-AAG
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 2 C 0
s Glis_glis.GliGli_scaffold_33859                            35092 20 -     36801 GGATGA-AAG-T--TGA----AA-T-G-AAG
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6404 20 -      8343 GGATGT-CAC-T--GCA----AA-T-C-AAA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255419 20 - 186649187 GGATGT-CAC-T--GCA----AA-T-C-AAA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2574 19 -     78134 GAATGT-AAG-T--TTA----AA-T-G-A-G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15335 20 -     40692 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36737 20 +     49394 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61605 20 -     66874 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10479 20 -     42923 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17478 20 -     53142 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31419 20 -    327341 AGATGT-AAC-T--GTA----TG-T-C-AAG
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9731 20 +     48891 AGACAC-AAC-T--GCA----AA-T-C-AAG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 2 C 0
s Heterocephalus_glaber.JH602082.1                         1933016 20 -  22651954 GTATGT-AAC-T--ACA----AA-A-C-AAG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                 265 20 +      8654 AGATGT-AAC-T--GCC----CG-T-C-ATG
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8244 20 -     36432 GGACAT-AAC-T--GCA----AA-T-C-AAG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552236 20 -   1711038 AGATGG-AAC-T--GAA----AA-T-C-CAG
i Hipposideros_armiger.JXIK01000431.1                    I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1674 20 -      2730 AGATGG-AAC-T--GCA----AA-T-C-CAG
i Hipposideros_galeritus.HipGal_scaffold_164997          I 2 C 0
s Hoolock_leuconedys.ctg274                                    143428 20 -    630532 GGATAT-AAC-T--GCG----AA-T-C-AAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70584 20 +     83186 AGATGT-AAC-T--GCA----TG-T-C-AAG
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 2 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72478 19 +    143317 GTATGT-AAC-T--A-A----AA-T-C-AAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6462 20 +     12352 GGATAT-AAC-T--GCG----AA-T-C-AAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13646 20 +     55766 GGATAT-AAC-T--GCG----AA-T-C-AAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053246 20 + 191637585 GGATAT-AAC-T--GCG----AA-T-C-AAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802124 20 +  11177569 GGATAT-AAC-T--GCG----AA-T-C-AAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7765 20 -    135385 GTGTGT-CAC-C--ACA----AA-T-C-AAG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387471 24 +   7955117 GGATGT-AAC-T--ACATGAATA-T-C-AAG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3035 20 +     11955 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10644 20 -     16823 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 2 C 0
s Jaculus_jaculus.JH725527.1                               1240492 20 +   9596543 GAATAT-AAT-T--ATA----AA-T-C-AAG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72484 20 -     97402 AGACAT-AAC-T--TCA----AG-T-C-AAG
i Kogia_breviceps.KogBre_flattened_line_3970             I 2 C 0
s Lagothrix_lagothricha.k141_246028                          43864 20 +    110728 GGATAA-AAC-T--GCA----AA-T-C-AAA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63501 20 -     65777 AGATGT-AAC-T--TCA----CT-T-C-AAG
i Lasiurus_borealis.LasBor_scaffold_16567                I 2 I 49
s Lemur_catta.scaffold_24                                 14760128 20 +  30322482 GGATAT-AAC-T--GCA----AA-T-C-AAA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4769 20 -     13097 GGATAT-AAC-T--GCA----GA-T-C-AGA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4523 20 +      5940 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4346 20 -      5717 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10736 20 -     11567 GGATGT-AAC-T--GCA----GA-T-C-AAA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12117 20 -     12945 GGATGT-AAC-T--GCA----GA-T-C-AAA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9640 20 +     29618 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9636 20 +     31569 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9646 20 +     24756 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9646 20 +     16388 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814119 20 -   3914936 AAATGT-AAC-T--ACA----TA-T-C-AAG
i Leptonychotes_weddellii.KB714746.1                     I 2 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18488 20 +     24238 GGATGT-AAT-G--ACA----AA-T-C-AAG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341829 20 +    662738 agaCAT-AAC-T--GCA----AG-T-C-AAG
i Lipotes_vexillifer.KE559953.1                          I 2 C 0
s Lophocebus_aterrimus.ctg367                               334783 20 -   1826925 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11955 21 +     19643 GAATAT-AAC-T--GCA----AAAT-C-AAG
i Loris_lydekkerianus.k141_2031736                       C 0 I 6
s Loris_tardigradus.ctg83                                  5045625 21 -   6120653 GAATAT-AAC-T--GCA----AAAT-C-AAG
i Loris_tardigradus.ctg83                                C 0 I 6
s Loxodonta_africana.GL010049.1                           39085038 20 +  43346337 GGCTGT-AAC-T--GCA----GA-T-C-GAG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615285 20 +  59628241 AAATGT-AAC-T--ACA----TA-T-C-AAG
i Lycaon_pictus.CM007581.1                               I 2 C 0
s Macaca_arctoides.k141_1757516                              46172 20 -     61512 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373834 20 -  60120075 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26102 20 +     30207 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             940 20 -      5035 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26055 20 +     30527 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37231 20 -     50087 GGATAT-AAC-T--GCA----AT-T-C-AAA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46975 20 +     51645 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416178 20 - 187317192 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400408 20 +  25927173 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49580 20 -     62418 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2111 20 +     14901 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46052 20 +     59329 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271960 20 +    668171 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   598 20 -      5049 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3758 20 +     17132 GGATAT-AAC-T--GCA----AC-T-C-AAA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223845 19 -    270270 AGATGT-AA--T--GCA----AA-T-C-AAG
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 2 C 0
s Mandrillus_leucophaeus.scaffold280                        323248 20 +  24302211 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358079 20 -    752769 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674172 20 -    737560 AGATGT-AAC-T--GCC----AA-T-C-AAG
i Manis_javanica.JSZB01003497.1                          I 2 C 0
s Manis_pentadactyla.KN006162.1                             221468 20 +    317179 AGATGT-AAC-T--GCC----AA-T-C-AAG
i Manis_pentadactyla.KN006162.1                          I 2 C 0
s Marmota_marmota.CZRN01000018.1                           7501689 24 +  40650429 GGACGT-AAC-T--ACATGCATA-T-C-AAG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151014 20 +    207569 AGATGT-AAC-T--GCA----AG-T-C-AAG
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26836 20 -     74585 AAATGT-AAC-T--ACA----TA-T-C-AAG
i Mellivora_capensis.MelCap_flattened_line_19308         I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50803 15 -    140813 GGATGT-GAT-T--AAC----AA--------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 29
s Mesocricetus_auratus.KB708134.1                         17429870 15 +  29670104 GGATAT-GATTT---AA----AA--------
i Mesocricetus_auratus.KB708134.1                        C 0 I 30
s Mesoplodon_bidens.MesBid_scaffold_6114                     88113 20 +     93471 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 2 C 0
s Mico_argentatus.k141_582562                                10903 20 +     17804 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11403 20 -     12984 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19719 20 -     26561 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985478 20 +  93316391 GAATAT-AAC-T--GCA----CA-T-C-AAG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47410 20 +    145209 AAATGT-AAC-T--ATA----CA-T-T-GTG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 8
s Micronycteris_hirsuta.MicHir_scaffold_2233                185701 20 +    200668 AGGTGG-AAC-T--TCA----AG-T-C-AAG
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 3 C 0
s Microtus_ochrogaster.CM001695.1                         15963077  9 +  27267610 GGATGT-GAT---------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 10
s Miniopterus_natalensis.LDJU01000034.1                    6363857 20 -   8254450 AGATGT-AAC-T--TCA----AG-T-C-AAG
i Miniopterus_natalensis.LDJU01000034.1                  I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42764 20 -     48117 AGATGT-AAC-T--TCA----AG-T-C-AAG
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 2 C 0
s Miopithecus_ogouensis.k141_1534655                         23282 20 -     27822 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9130 20 +     27589 AAATGT-AAC-T--ACA----TA-T-C-AAG
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 2 C 0
s Mirza_zaza.k141_766280                                     53261 20 -     62432 GAATAT-AAC-T--GCA----AA-T-C-AAG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360218 20 +    437263 AGACAT-AAC-T--GCA----AA-T-C-AAG
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179933 13 +    366855 AGATCT-GAC-T--TCA--------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 I 2
s Moschus_moschiferus.MosMos_scaffold_13123                  26177 20 -     82753 AGACAT-AAC-T--GCA----AA-T-C-AAG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19144 20 -     63510 AGATGT-AAC-T--GTA----TG-T-C-AAG
i Mungos_mungo.MunMun_flattened_line_18455               I 2 C 0
s Murina_feae.MurFea_scaffold_17764                          39823 20 +     47283 AGAAGT-AAC-T--TCA----AG-T-C-AAG
i Murina_feae.MurFea_scaffold_17764                      I 2 C 0
s Mus_caroli.LT608237.1                                   35593785 15 + 120012414 AGATGC-TAT-T--AAC----AA--------
i Mus_caroli.LT608237.1                                  C 0 I 24
s Mus_musculus.chr8                                       41688174 15 + 129401213 GGATGC-TAT-T--AAC----AA--------
i Mus_musculus.chr8                                      C 0 I 24
s Mus_spretus.CM004101.1                                  39497468 15 + 130317789 GGATGC-TAT-T--AAC----AA--------
i Mus_spretus.CM004101.1                                 C 0 I 24
s Muscardinus_avellanarius.MusAve_scaffold_12866             84130 21 -     86153 GTACATCAAG-T--TGA----AA-T-G-AAG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355758 20 +  14710649 AAATGT-AAC-T--ACA----TA-T-C-AAG
i Mustela_putorius.JH418006.1                            I 2 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63733 20 +     67721 GTATGT-AAC-T--ACA----AA-T-C-AAG
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794079 20 +  10118263 AGCTGT-AAC-T--TCA----AG-T-C-AAG
i Myotis_brandtii.KE162005.1                             I 2 C 0
s Myotis_davidii.KB100139.1                                4388252 20 +   6019432 AGATGT-AAC-T--TCA----AG-T-C-AAG
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                               384040 20 +   4330536 AGATGT-AAC-T--TCA----AG-T-C-AAG
i Myotis_lucifugus.GL429869.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3073 20 +     18357 AGATGT-AAC-T--TCA----AG-T-C-AAG
i Myotis_myotis.MyoMyo_scaffold_66571                    I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120429 20 +    130748 AGAAGT-AAC-T--GCA----AA-T-C-AAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947358 20 +   3037898 GGATTT-GTT-T--AGA----AA-T-C-AAG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29938 20 +     34575 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232884 20 -   7148211 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Neophocaena_asiaeorientalis.KZ687982.1                 I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128885 19 -    149072 -GATGT-AAC-T--TCA----AG-C-C-AAC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54354 20 -    132029 GGATAT-AAC-T--GCG----AA-T-C-AAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10449 20 -     16345 GGATAT-AAC-T--GCG----AA-T-C-AAA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16334 20 +     22201 GGATAT-AAC-T--GCG----AA-T-C-AAA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414555 20 -  22158432 GGATAT-AAC-T--GCG----AA-T-C-AAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26732 20 -     54323 GGATAT-AAC-T--GCG----AA-T-C-AAA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198881 20 +   9404916 AAATGT-AAC-T--ACA----TA-T-C-AAG
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 2 C 0
s Nycticebus_bengalensis.LG01                             93638854 21 + 196305487 GAATAT-AAC-T--GCA----AAAT-C-AAG
i Nycticebus_bengalensis.LG01                            C 0 I 6
s Nycticebus_coucang.k141_1296080                             1457 21 -      9413 GAATAT-AAC-T--GCA----AAAT-C-AAG
i Nycticebus_coucang.k141_1296080                        C 0 I 6
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566237 21 - 199412804 GAATAT-AAC-T--GCA----AAAT-C-AAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 6
s Ochotona_princeps.JH802162.1                             2557542 20 -   3988456 CAGTGT-AAT-A--GCA----AG-T-C-AAG
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055689 20 -  11899542 GTATGT-AAC-T--GCA----AA-T-C-AAG
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452547 20 +   2017862 AAATAT-AAC-T--ACA----TT-T-C-AAG
i Odobenus_rosmarus.KB229312.1                           I 2 C 0
s Odocoileus_virginianus.KZ100018.1                         436947 20 -    630418 AGACAT-AAC-T--GCA----AA-T-C-AAG
i Odocoileus_virginianus.KZ100018.1                      I 2 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15141 20 +    150152 AGACAT-AAC-T--GCA----AA-T-C-AAG
i Okapia_johnstoni.LVCL01S0005463.1                      I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93429 17 -    140218 GGATGT-GATAA-GAAA----TA--------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_28377                    4298 16 -     41509 GGATGT-AATTA--AAG----AA--------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 4
s Orcinus_orca.KB316932.1                                  8103286 20 +  10937097 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Orcinus_orca.KB316932.1                                I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                330 20 +     11607 AAATTT-AAC-T--GCA----TA-T-T-GAG
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104291  8 - 174332312 ----------------A----AA-T-C-AAG
i Oryctolagus_cuniculus.CM000791.1                       I 9 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39926 20 +    559221 AAATGT-AAC-T--ACA----TA-T-C-AAG
i Otocyon_megalotis.JAEUCK010005147.1                    I 2 C 0
s Otolemur_crassicaudatus.k141_649260                        41405 21 -     51505 GAATAT-AAC-T--GCA----AAAT-C-AAG
i Otolemur_crassicaudatus.k141_649260                    C 0 I 6
s Otolemur_garnettii.GL873799.1                             354408 21 +   1103335 GAATAT-AAC-T--GCA----AAAT-C-AAG
i Otolemur_garnettii.GL873799.1                          C 0 I 6
s Ovis_aries.CM001607.2                                   26404851 20 -  44047080 AGACAC-AAC-T--GCA----AA-T-C-AAG
i Ovis_aries.CM001607.2                                  I 2 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5370 20 +     17875 AGACAC-AAC-T--GCA----AA-T-C-AAG
i Ovis_canadensis.OviCan_scaffold_67953                  I 2 C 0
s Pan_troglodytes.NBAG03003182.1                             12593 21 -     24457 GGATGt-cac-t--gca----aa-t-caaaa
i Pan_troglodytes.NBAG03003182.1                         I 2632 I 668
s Panthera_onca.PanOnc_flattened_line_3271                   25149 20 -    230217 AGATGT-AAC-T--GCA----TG-T-C-AAA
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                              18462475 20 -  18783137 AGATGT-AAC-T--GCA----TG-T-C-AAA
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               3973134 20 +   8748460 AGATGT-AAC-T--GCA----TG-T-C-AAA
i Panthera_tigris.KE722367.1                             I 2 C 0
s Pantholops_hodgsonii.KE114653.1                          1616379 20 +   2937107 AGACAT-AAC-T--GCA----AA-T-C-AAG
i Pantholops_hodgsonii.KE114653.1                        I 2 C 0
s Papio_anubis.CM001495.2                                   244080 20 - 183742232 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10542 20 +     21308 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293115 20 -  20919399 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23190 20 -     27687 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16336 20 +     16796 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23147 20 -     23640 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15729 13 +     78924 --------AC-T--GCA----CG-T-C-AAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27735 21 +     31479 GAATAA-AAC-T--GCA----AAAT-C-AAG
i Perodicticus_ibeanus.k141_1921260                      C 0 I 6
s Perodicticus_potto.k141_1854441                            20103 21 -     24908 GAATAA-AAC-T--GCA----AAAT-C-AAG
i Perodicticus_potto.k141_1854441                        C 0 I 6
s Perognathus_longimembris.PerPac_flattened_line_89005        2557 13 +      9367 GCAAAT-AAG-T--ACA--------------
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247508 16 +  18517816 GGATGT-GATTA--AAG----AA--------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 4
s Petromus_typicus.PetTyp_scaffold_17301                     32582 20 -     56120 GTGTAT-AAC-T--ACA----AA-T-G-AAG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4812 20 -     63832 AGATAT-AAC-T--GCA----AG-T-C-AAG
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 2 C 0
s Piliocolobus_badius.k141_2704958                            3369 20 +     55023 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2907 20 -     89929 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3497 20 +     40849 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255172 20 +  14605196 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4669 20 +     22231 AGATGT-AGC-T--TCA----AG-T-C-AAG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 2 C 0
s Pithecia_albicans.k141_1239476                             65487 20 +    207309 GGACAT-AAC-T--GCA----CA-T-C-AAA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6579 20 -     25401 GGACAT-AAC-T--GCA----CA-T-C-AAA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32323 20 +     58159 GGACAT-AAC-T--GCA----CA-T-C-AAA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32599 20 +     63561 GGACAT-AAC-T--GCA----CA-T-C-AAA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32359 20 +     51148 GGACAT-AAC-T--GCA----CA-T-C-AAA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557329 20 -   4542175 GGACAT-AAC-T--GCA----CA-T-C-AAA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32343 20 +     51125 GGACAT-AAC-T--GCA----CA-T-C-AAA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1829 20 +     19503 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Platanista_gangetica.PlaMin_flattened_line_83166       I 2 C 0
s Plecturocebus_bernhardi.k141_2549090                        8754 20 +     39866 GAATAT-AAC-T--GCA----AA-C-C-AAA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3836 20 -      9282 GAATAT-AAC-T--GCA----AA-C-C-AAA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43240 20 -     87950 GAATAT-AAC-T--GCA----AA-C-C-AAA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43636 20 -     88961 GAATAT-AAC-T--GCA----AA-C-C-AAA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8332 20 -     39403 GAATAT-AAC-T--GCA----AA-C-C-AAA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43283 20 +     87928 GAATAT-AAC-T--GCA----AA-C-C-AAA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8331 20 -     60166 GAATAT-AAC-T--GCA----AA-C-C-AAA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15268 20 -     67232 GAATAT-AAC-T--GCA----AA-C-C-AAA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43184 20 -     90634 GAATAT-AAC-T--GCA----AA-C-C-AAA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44651 20 +     89403 GAATAT-AAC-T--GCA----AA-C-C-AAA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178558 20 - 189387572 GGATGT-AAC-T--GCA----AA-T-C-AAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193375 20 -   9816681 GGATGT-AAC-T--GCA----AA-T-C-AAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28518 20 +     69807 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45699 20 -     80239 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 4255 20 +      7663 AGATGT-AAC-T--GCC----CG-T-C-ATG
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983276 20 +   4620579 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566786 20 -   2598838 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4424 20 -      7103 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5021 20 -     11706 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8759 20 -     30655 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35072 20 +     46564 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95351 20 -     98465 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          8990 20 +     35169 GGATAT-AAC-T--GCA----AA-T-C-AAG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38104 15 +     52041 GGATGT-GAT-T--AAC----AA--------
i Psammomys_obesus.NESX01036366.1                        C 0 I 4
s Pteronotus_parnellii.KE847780.1                            52826 13 -     66298 AGATGT-AAA-T--TCA--------------
i Pteronotus_parnellii.KE847780.1                        I 3 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5332 20 -     18639 AAATGT-AAC-T--ACA----TA-T-C-AAG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 2 C 0
s Pteropus_alecto.KB030862.1                               5841418 19 -  28871421 AGATGT-AA--T--GCA----AA-T-C-AAG
i Pteropus_alecto.KB030862.1                             I 2 C 0
s Pteropus_vampyrus.KN525825.1                             3537933 19 -   4952924 AGATGT-AA--T--GCA----AA-T-C-AAG
i Pteropus_vampyrus.KN525825.1                           I 2 C 0
s Puma_concolor.QAVW01001104.1                            18099791 20 +  38429054 AGATGT-AAC-T--GCA----TG-T-C-AAG
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             27887 20 +     91421 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154371 20 -   7812017 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8744 20 +     72585 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53864 20 +     55069 AGACAT-AAC-T--GCA----AA-T-C-AAG
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 2 C 0
s Rattus_norvegicus.chr16                                 37023602 15 -  90668790 GGATGC-TAT-T--AAC----AA--------
i Rattus_norvegicus.chr16                                C 0 I 29
s Rhinolophus_sinicus.LVEH01000134.1                       2915398 20 +   3329780 AGATGT-AAC-T--GCA----AA-T-C-CAG
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 C 0
s Rhinopithecus_bieti.k119_778604                             2472 20 +      7119 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123088 20 + 195417433 GGATAT-AAC-T--GCA----GC-T-C-GAA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237314 20 -   7961872 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75917 19 -    116970 AGATGC-TA--T--GCA----AA-T-C-AAG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 2 C 0
s Saguinus_bicolor.k141_1429097                               4643 20 +     27962 GGATAT-AAC-T--GAA----GA-T-C-AAA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4537 20 +      6077 GGATAT-AAC-T--GAA----GA-T-C-AAA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4627 20 +      5971 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4548 20 +      5932 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2890 20 -      4390 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392327 20 - 209938924 GGATAT-AAC-T--GAA----GA-T-C-AAA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4496 20 +      5979 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1066 20 -     22275 GGATAT-AAC-T--GAA----GA-T-C-AAA
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8539 20 +     16473 AGACAT-AAC-T--GCA----AA-T-C-AAG
i Saiga_tatarica.SaiTat_scaffold_39512                   I 2 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109663 20 + 121099817 AGATAT-AAC-T--GCA----GA-T-C-AAA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31230 20 -     47369 AGATAT-AAC-T--GCA----GA-T-C-AAA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31616 20 -     79414 AGATAT-AAC-T--GCA----GA-T-C-AAA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28307 20 -     34454 AGATAT-AAC-T--GCA----GA-T-C-AAA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15708 20 -     22428 AGATAT-AAC-T--GCA----GA-T-C-AAA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30862 20 -     47109 AGATAT-AAC-T--GCA----GA-T-C-AAA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238908 20 +   5703754 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8498 20 +     21866 GGATAT-AAC-T--GCA----GA-T-C-AAA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116560 20 +    313613 ACTTGT-AAC-T--GCA----AA-T-C-AAG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_158471                         26213 20 +     27374 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29725 20 +     58920 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16223 20 -     45317 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23881 20 -     42441 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26559 20 -     29113 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29634 20 -     48123 GGATAT-AAC-T--GCA----GC-T-C-GAA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49882 15 +     77746 -GATGT-GATTT--AAA----AA--------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 4
s Solenodon_paradoxus.SolPar_flattened_line_126            1864832 20 -   1910179 AGATGT-AAC-T--GCA----AA-T-C-AAG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671938 20 +  18376816 atatat-aat-t--gca----AA-T-C-AAG
i Sorex_araneus.JH798187.1                               C 0 I 6
s Spermophilus_dauricus.KZ294078.1                         1869049 24 +   3870691 GGACGT-AAC-T--ACATGCATA-T-C-AAG
i Spermophilus_dauricus.KZ294078.1                       C 0 I 26
s Spilogale_gracilis.SpiGra_flattened_line_13525              7419 20 -     97271 ACATGA-AAC-T--TCA----TA-T-C-AAG
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 2 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125560 20 +    196729 AGATGT-AAC-T--GTA----TG-T-C-AAG
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                    6644446 20 +  69701581 AGACAT-AAC-T--GCA----AA-T-C-AAG
i Sus_scrofa.CM000828.4                                  I 2 C 0
s Symphalangus_syndactylus.tarseq_199                       391814 20 +   1523678 GGATAT-AAC-T--GCG----AA-T-C-AAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                14992 20 +     22964 AGATGT-AAC-T--TCA----AG-T-C-AAG
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3420 20 +      5583 AGAAGT-AAC-T--GCA----AA-T-C-AAG
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192299 20 +    199430 CAACGT-AAC-T--GCA----AA-T-C-AAA
i Tapirus_indicus.TapInd_scaffold_7432                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106267 20 -    539355 CAACGT-AAC-T--GCA----AA-T-C-AAA
i Tapirus_terrestris.TapTer_scaffold_755                 I 2 C 0
s Tarsius_lariang.k141_1733899                                1333 20 +      9917 GGATGT-AAC-T--GCA----AT-T-C-AAG
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8131 20 +     20590 GGATGT-AAC-T--GCA----AT-T-C-AAG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354066 20 - 186847797 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24756 20 -     33621 ATGTGC-AAC-T--ACA----AA-T-C-GAT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20408 20 -     31044 AGATGG-AAC-T--GCC----AG-T-C-GAG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480819 20 -    610378 ATATGG-AAC-T--TCA----AG-T-C-AGG
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_1189070                        21758 20 +     26378 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34434 20 -     78344 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21083 20 +     25722 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29390 20 -     62838 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29434 20 +     46913 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10243 20 -     28527 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31325 20 -     64340 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29363 20 -     63452 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10810 20 +     22490 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4233 20 -      6147 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11146 20 -     13050 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256376 20 -   6242583 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2404 20 +     19340 GGATAT-AAC-T--GCA----AC-T-C-GAA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174153 20 -    200418 AGAGAT-AAC-T--GTA----AA-T-T-AAG
i Tragulus_javanicus.TraJav_scaffold_3462                I 2 C 0
s Trichechus_manatus.JH594705.1                            6481780 20 -  10818551 AGATGT-AAT-T--GCA----GA-T-C-AAG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835056 20 -   4065304 GGATGT-AGC-T--GCA----AA-T-G-AAG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9076 20 -     70247 GGATGT-AGC-T--GCA----AA-T-G-AAG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366399 20 -  33153633 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Tursiops_truncatus.MRVK01000835.1                      I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4285 20 -     21056 ACATAT-AAC-T--ATA----AA-T-C-AAA
i Uropsilus_gracilis.UroGra_scaffold_46687               I 2 C 0
s Ursus_maritimus.KK499267.1                                182722 20 +   5085361 AGATGT-AAC-T--ACG----TA-T-C-AAG
i Ursus_maritimus.KK499267.1                             I 2 C 0
s Varecia_rubra.k141_787544                                  25932 20 -     30710 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24839 20 -    147434 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76979 20 +   5488506 AGATAT-AAC-T--GCA----AA-T-C-AAG
i Vicugna_pacos.KN270157.1                               I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105647 20 -    112863 AAATGT-AAC-T--ACA----TA-T-C-AAG
i Vulpes_lagopus.VulLag_flattened_line_12041             I 2 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174834 20 -    224448 AGATGT-AAC-T--ACA----TA-T-C-AAG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 26
s Zalophus_californianus.ZalCal_flattened_line_17732         29755 20 -     86975 AAATAT-AAC-T--ACA----TT-T-C-AAG
i Zalophus_californianus.ZalCal_flattened_line_17732     I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       675 20 -      1899 CTATAT-AAT-T--ATA----AA-A-C-AAA
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1683 20 +      2126 AGACAT-AAC-T--GCA----AG-T-C-AAG
i Ziphius_cavirostris.ZipCav_flattened_line_504766       I 2 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 44857  0 -     83289 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6124 49 +     36723 CTAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
s Acinonyx_jubatus.LLWD01001279.1                           813553 45 +   1699592 CTAGTGGG--------C-----CTCTCT--TTCCTCAGG-A--AA--T---TTTT-C---GAC-T-AA-AG-A---CGT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25819 22 +     63021 --------------------------------------------A--ATCCTCCC-A---TGT-T-AA-GG-A---CAC
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 29 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416006 49 +  29979442 CTAGTGGG--------C-----TTCTCTTGTTCCTCGGA-A--AA--AG-TTTTT-G---TAC-T-AA-AG-A---AGt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216351 49 +    347723 CTAGTGGG--------G-----TTCTCTTGTTACTTAGG-A--AG--AG-TTTTT-G---TAC-T-AA-AG-A---AGT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18734 49 -     61208 TCTGTG-G--------C-----TTTTCATGTTTCTTAGC-A--AG--AT-TTTCG-A---CATCT-AA-AG-A---ATC
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48769 49 +     53615 CCAGTGGA--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           800 49 +     13857 CCATTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--TT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17351 49 -     21945 CCATTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--TT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19036 49 +     32033 CCATTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--TT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72870 49 -     84148 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AT-GTTCC-A---CAT-T-AA-AG-A---AAC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45109 49 -     78289 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AT-GTTCC-A---CAT-T-AA-AG-A---AAC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44548 49 +     55831 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AT-GTTCC-A---CAT-T-AA-AG-A---AAC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                42998 49 -     64179 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AT-GTTCC-A---CAT-T-AA-AG-A---AAC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24632 49 -     24835 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AT-GTTCC-A---CAT-T-AA-AG-A---AAC
i Alouatta_macconnelli.k141_361275                       C 0 I 2
s Alouatta_nigerrima.k141_376068                             41623 49 +     45454 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AT-GTTCC-A---CAT-T-AA-AG-A---AAC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47272 49 +     70886 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGT-A--AA--AT-GTTAC-A---CAT-T-AA-AG-A---AAC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9445 49 +     30854 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AT-GTTCT-A---CAT-T-AA-AG-A---AAC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33579 49 +     42133 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AT-GTTCC-A---CAT-T-AA-AG-A---AAC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586004 54 +   2318259 CCAGTGGG--------CATGGCATCTCTTATTCCTTAGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177802 49 -    412891 CCAGTGGG--------T-----TTCCCTCATTCCTTAAG-A--AA--AT-TCTCC-A---CAT-T-AA-AG-A---AGC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51111 54 -     68529 CCAGTGGG--------CATAGCATCCCTTATTCCTTTGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1836 49 +     17741 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2461 49 -     15923 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672743 49 +   5030052 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2737 49 -     16391 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2296 49 -     17186 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16839 22 -     32367 -------------------------------------------AA--AA-CTTCC-A---TAT-T-AA-AG-A---AAC
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 25 C 0
s Arctocebus_calabarensis.k141_1364444                       20916 37 -     45910 --------------------------TTTTTTCTTTAGT-A--AA--AT-TTTCC-A---CAT-T-AG-AGAA---AAC
i Arctocebus_calabarensis.k141_1364444                   I 6 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6068 49 -     15198 CCAGCGGG--------T-----TTCCTTCATTCCTTAAG-A--AA--AC-TGCCC-A---CAT-T-AA-AG-A---AGC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275333 49 +  21539123 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11501 49 +     48076 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6636 49 -     28759 CGAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34190 49 +     44353 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49561 49 -     71267 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23619 49 -     33135 CGAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6911 49 +     11645 CCAGCGGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-T---CAT-T-AA-AG-A---AAA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6919 49 -     19611 CCAGCGGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-T---CAT-T-AA-AG-A---AAA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964155 47 -  23207421 CCAGTGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-Tttcc-a---cat-t-aa-ag-a---a--
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          655 47 -     25979 CCAGTGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-TTtcc-a---cat-t-aa-ag-a---a--
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87012 54 +    124022 CCAGTGGG--------CATGGCATCCCTTATTCCTTAGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22554 54 +    288883 CCAGTGGG--------CATGGCGTCCCTTATTCCTTAGG-A--AA--AA-TTTCC-A---CAT-T-AA-AG-A---AGC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356944 54 +  48749331 CCAGTGGG--------CATGGCGTCCCTTATTCCTTAGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755508 54 +   1948126 CCAGTGGG--------CATGGCGTCCCTTATTCCTTAGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545650 54 -  45695690 CCAGTGGG--------CATGGCGTCCCTTATTCCTTAGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530665 54 -   4408762 CCAGTGGG--------CATGGCGTCCCTTATTCCTTAGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8509 49 +     28062 GCAGTGTG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AG-TTTCC-A---CAT-T-AA-AG-A---AAC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43803 49 -     91139 GCAGTGTG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AG-TTTCC-A---CAT-T-AA-AG-A---AAC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21329 49 +     95584 GCAGTGTG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AG-TTTCC-A---CAT-T-AA-AG-A---AAC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21242 49 +    119600 GCAGTGTG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AG-TTTCC-A---CAT-T-AA-AG-A---AAC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10816 49 +     18648 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-CA-AG-A---AAC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10350 49 -     13885 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-CA-AG-A---AAC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2421 49 -      8861 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-CA-AG-A---AAC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454813 49 + 189096842 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-CA-AG-A---AAC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2336 49 +      8664 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-CA-AG-A---AAC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631667 49 +  17673402 CCAATGGG--------C-----GTCTCTTGTTCCTTAGG-A--AA--AT-TTTCT-G---CAT-T-AA-AT-A---AGT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4665954 49 +   7040546 CCAATGGG--------C-----GTCTCTTGTTCCTTAGG-A--AA--AT-TTTCT-G---CAT-T-AA-AT-A---AGT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209613 49 +   1652518 CCAATGGG--------C-----GTCTCTTGTTCCTTAGG-A--AA--AT-TTTCT-G---CAT-T-AA-AT-A---AGT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506036 42 +  60362399 CTAGTAGG--------C-----TTCTCTTGTTCCTCAGG-A--AA--AG-TTTTT-G---TAC-T-A------------
i CanFam4.chr16                                          C 0 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9672 42 -     23171 CTAGTAGG--------C-----TTCTCTTGTTCCTCAGG-A--AA--AG-TTTTT-G---TAC-T-A------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 4
s Canis_lupus_dingo.QKWQ01000480.1                          223015 42 +   9314153 CTAGTAGG--------C-----TTCTCTTGTTCCTCAGG-A--AA--AG-TTTTT-G---TAC-T-A------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 4
s Canis_lupus_familiaris.chr16                            41616150 42 +  59632846 CTAGTAGG--------C-----TTCTCTTGTTCCTCAGG-A--AA--AG-TTTTT-G---TAC-T-A------------
i Canis_lupus_familiaris.chr16                           C 0 I 4
s Canis_lupus_orion.HG994398.1                            45107731 42 -  63665305 CTAGTAGG--------C-----TTCTCTTGTTCCTCAGG-A--AA--AG-TTTTT-G---TAC-T-A------------
i Canis_lupus_orion.HG994398.1                           C 0 I 4
s Capra_aegagrus.CM003241.1                               27409733 54 -  46296322 CCAGTGGG--------CATGGCATCTCTTATTCCTTAGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592007 54 +  44709034 CCAGTGGG--------CATGGCATCTCTTATTCCTTAGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    183 47 -      1607 ACA-TAGG--------T-----GTCTCTTGT-CCTTAGC-A--AA--AT-TTTCC-A---CAA-T-AA-AG-A---AGG
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271121 49 +    496798 TCAGTGGG--------C-----TTGTCTTGCATCTTAGC-A--AA--AA-TTTCC-G---TAT-T-AC-AT-G---AAC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                924 49 +      9923 CCGGTGGG--------T-----TTCCCTCTTTCCTTAAG-G--AC--AT-TTTCC-C---CAT-T-AA-GG-A---AGC
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28324 46 -     39886 CCCGTGGG--------G-----TTTGCTTATTCCCT----A--AA--AT-TTTCA-A---CTT-T-AA-AG-A---AGC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80209 49 -    217609 CCAGTGGA--------T-----GTCTCTTATTCCTTAGG-A--AA--AT-TTTCT-G---CAT-T-AA-AG-A---AAT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997052 48 +  23392119 CCT-TAGG--------T-----TTCTCTTGTTCCTTAGC-A--AA--AA-TTTCC-A---GAT-T-AA-AG-G---AGG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000493 48 +  23407841 CCT-TAGG--------T-----TTCTCTTGTTCCTTAGC-A--AA--AA-TTTCC-A---GAT-T-AA-AG-G---AGG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63574 48 -     66877 CCT-TAGG--------T-----TTCTCTTGTTCCTTAGC-A--AA--AA-TTTCC-A---GAT-T-AA-AG-G---AGG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5734 49 -     12580 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-CA-AG-A---AAC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43791 49 +     53515 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-CA-AG-A---AAC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373554 49 -  26074798 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-GA-AG-A---AAC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8608 49 -     34880 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-GA-AG-A---AAC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67704 49 -     89041 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-GA-AG-A---AAC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3081 49 -      5494 TCAGTGGG--------T-----TTGTCTTGCATCTTAGC-A--AA--AT-TTTCC-C---TAT-T-AC-AT-G---AAC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492834 49 -  27778364 CCAGTGGG--------C-----TTCTCCTGTTCCTTAGG-A--AA--AT-TTTCT-G---AAT-T-CA-AG-A---AGC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19667 49 +     27315 CCAGTGGG--------C-----TTCTCCTGTTCCTTAGG-A--AA--AT-TTTCT-G---AAT-T-CA-AG-A---AGC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141918 49 -   4669795 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45662 49 +     47900 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1090 49 -     14410 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45474 49 -    148725 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27683 49 -     40656 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7647 49 +     20796 CCAGTGGG--------C-----ATCTCTTGTTTCTCAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12765 49 -     17524 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28488 49 -     34525 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12268 49 -     25376 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364855 49 -  39242232 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270582 49 +  21565898 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32950 49 -     45857 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27851 49 -     32606 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4013 49 +      8499 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26409 49 +     70610 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23370 49 +     36323 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13349 50 -     19938 CCAGCGGG--------C-----TTCTCTCGTTCCGCAGG-A--GA-CGT-TTTCC-A---CGT-T-AA-AG-A---AGC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31285 49 -     33796 CCAGTGGG--------C-----GCCTCTTGGTTCTTAGC-A--AC--AT-TTTTC-A---CGT-T-AA-AG-A---ACT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5799 49 -     15404 CCAGTGGG--------C-----GCCTCTTGGTTCTTAGC-A--AC--AT-TTTTC-A---CAT-T-AA-AG-A---AAT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9609 56 -     32913 CCAGTGAGAATCAAACC-----ATCTCTTGTTTCTATGC-A--AA--AT-TT-CC-A---CAT-T-AA-AG-A---AAC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20022 56 -     40346 CCAGTGAGAATCAAACC-----ATCTCTTGTTTCTATGC-A--AA--AT-TT-CC-A---CAT-T-AA-AG-A---AAC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20277 56 +    216457 CCAGTGAGAATCAAACC-----ATCTCTTGTTACTATGC-A--AA--AT-TT-CC-A---CAT-T-AA-AG-A---AAC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20070 56 +     39636 CCAGTGAGAATCAAACC-----ATCTCTTGTTACTATGC-A--AA--AT-TT-CC-A---CAT-T-AA-AG-A---AAC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239417 51 -   2543920 ACA-TAGG--------T-----TTCTCTtgttctttata-a--aa--aa-attct-aaaaaat-t-aa-ag-a---agc
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4665 49 +      5346 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAG-T-AA-AG-A---AAC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43140 49 -    112038 CCAGTGTG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AG-TTTCC-A---CAT-T-AA-AG-A---AGC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8691 49 +     34062 CCAGTGTG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AG-TTTCC-A---CAT-T-AA-AG-A---AGC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344271 49 +  18827391 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--TT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10815 49 -     44032 CCATTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--TT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305596 49 - 135778131 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--TT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15480 50 +     15858 CCAGTGGG--------A-----TCCTCTTATTCCTCAAG-A--AA-TGT-TTTCC-A---TAT-T-AA-AG-A---AGC
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607055 50 -    839153 CCAGTGGG--------A-----TCCTCTTATTCCTCAAG-A--AA-TGT-TTTCC-G---TAT-T-AA-AG-A---AGC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2169 50 +      2406 TTAGTGGG--------C-----TTCCCTTGTTCCTCTAG-A--AA-CAC-TTTTC-A---TAT-T-AA-AG-A---AAC
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             410001 49 -   2368649 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379882 49 - 200372422 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3439 49 -     84244 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807904 49 +  53390261 CTGTTAGG--------C-----TTATCTTCTTCCTTAGG-A--AA--AC-TTTCT-G---CAT-T-AC-AG-A---AGT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3435 49 -      8242 CCAGTGGG--------C-----TTCTCTTGTTCCTTTGG-A--AA--GT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44857 21 -     83289 --------------------------------------------A--AT-CTCTT-C---TGT-T-AA-AG-A---CAC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115534 21 - 224834208 --------------------------------------------A--AT-CTCCC-A---TGT-T-AA-AG-A---CAT
i Cricetulus_griseus.LT883664.1                          I 29 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10048 21 +     12657 --------------------------------------------A--AA-ATTCT-G---CAT-G-GA-AT-C---AGT
i Crocidura_indochinensis.CroInd_scaffold_77846          I 23 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5007 43 +     87169 CTAGTGGG--------T-----GTCTCTTGTTCGTCAGG-A--AA--TT-TTTTT-G---CAC-T-AA-----------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646060 49 -   1526836 CCTGTGGG--------C-----TATTCTTATTCTTTAAC-A--AA--AT-TGTCA-A---CAT-T-CA-AA-A---AGT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  18970 47 +     50838 ACA-TAGG--------T-----GTCTCTCAT-CCTTAGC-A--AA--GT-TTTCC-A---CAA-T-AA-AG-T---AGA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   4978 47 +     36344 ACC-TAGG--------T-----TTCTCTTGTTCCTTAGC-A--AA--AA-TTT-C-A---CAT-T-AA-AG-A---AGG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28754 48 +     75252 ACA-TGGT--------T-----TTCTCCTGTTCCTTAGC-A--AA--AA-TTTCC-A---CAT-T-AA-AG-A---AGA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110700 50 -   2246927 CCAGTGGG--------C-----ATCTCTTGTTCCTCAGG-A--GA-CGT-TGTCC-G---CAT-T-AA-AG-A---AGA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293221 49 +  12879189 CTGGTGGG--------C-----TCCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632563 47 -  35494412 CCAGTGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-TTtcc-a---cat-t-aa-ag-a---a--
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11865991 49 -  20541912 CCAGGGGG--------T-----TTCTCTCGTTCCTTAAG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665118 49 -   1390856 CCAGTGGG--------C-----TTCTCCTGTTCCTTAGG-A--AA--AT-TTTCT-G---CAT-T-CA-AG-A---AGC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139911 49 -    198055 CCAGTGGG--------T-----TTCTCCTGTTCCTTAGG-A--AA--AT-TTTCT-G---CAT-T-CA-AG-A---AGC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99502 48 -    115145 ACA-TAGG--------T-----TTCTCTTGTTCTTTAGC-A--AA--GA-TTTCC-A---CAT-T-AA-AG-A---AGG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951220 26 -  37912305 -----------------------------------TAAC-T-G-C--A--TTTTC-A---TAT-T-AC-AG-A---AGG
i Dipodomys_ordii.KN672350.1                             I 2 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6152 26 -     10735 -----------------------------------TAAC-T-G-C--A--TTTTC-A---TAT-T-AC-AG-A---AGG
i Dipodomys_stephensi.DipSte_scaffold_89095              I 7 C 0
s Echinops_telfairi.JH980293.1                            62856203 40 - 111700974 -----------------------TCCCTTGTTTCTCTGG-A--AC-CAT-TTCCC-A---GTG-T-AA-AA-A---AGT
i Echinops_telfairi.JH980293.1                           I 8 C 0
s Eidolon_helvum.AWHC01266696.1                               6897 49 +     19438 ACAGTgag--------c-----ttctctttttccttagg-a--aa--gt-ttttt-a---cat-t-aa-ag-a---agc
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240374 48 -    607251 CCAGTGGG--------CATGGCATCCCTTATTCCTTAGG-A--AA--AG-TTTCC-A---CAT-T-AA-----------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 3
s Elephantulus_edwardii.JH947257.1                         1226383 50 +  10337057 TGAGTGAA--------C-----TTCTCCTGCTCCTCTGG-A--AA-TAT-TTTCC-C---CAT-T-AA-TG-A---AGC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31654 21 +    110024 CCTGCGGG--------T-----CTCTCTTACTCC---------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 4 I 14
s Ellobius_talpinus.LOJH01026522.1                           13625 21 +     18970 cctgTGGG--------T-----CTCTCTTACTCC---------------------------------------------
i Ellobius_talpinus.LOJH01026522.1                       I 4 I 14
s Enhydra_lutris.KZ291758.1                               24916757 49 +  41312741 CTAGTGGG--------A-----TTCTCTTGTTACTCGGG-A--AA--AG-TTTTT-G---TAC-T-AA-AG-A---AGT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579540 49 +  14770903 CCAGTGGG--------C-----TTCTCTTGTTCCTTAAG-A--AA--AT-TTTCT-A---CAT-T-AA-AG-A---AGT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042039 49 -   4378816 CTATTGGG--------C-----TTCTCTTGCTCCTTAGG-A--GA--AT-TTTCT-G---CAT-T-CA-AG-A---AGC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21375977 49 +  39960074 CTAGTGAG--------A-----TTCTCTTGCTCCTTAGG-A--GA--AT-TTTCT-G---CAT-T-CA-AG-A---AGC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              411959 49 -    498745 CTAGTGAG--------C-----TTCTCTTGCTCCTTAGG-A--GA--AT-TTTCT-G---CAT-T-CA-AG-A---AGC
i Equus_przewalskii.KK951119.1                           I 75 C 0
s Erinaceus_europaeus.JH835339.1                           3666682 48 +   7059049 CCAAtgga--------t-----ttttcttata-ttttgg-a--AA--AT-GTCCT-A---CTT-T-AA-AC-A---AGT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263807 49 +  21539334 CCATTGGG--------C-----ATCTCTTGTTTCTTAAC-A--GA--TT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71769 47 -    133382 CCAGTGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-TTTCC-A---CAT-T-AA-AG-A---A--
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257991              356 47 -      1072 ccAGTGGA--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-TTTCC-A---CAT-T-AA-AG-A---A--
i Eubalaena_japonica.EubJap_flattened_line_257991        N 0 I 464
s Eulemur_albifrons.k141_51491                               15426 49 -     24895 CCAGTGGC--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43136 49 -     70999 CCAGTGGC--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87106 49 +    112731 CCAGTGGC--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43668 49 +     68309 CCAGTGGC--------C-----TCCTCTTGGTTCTTTGC-A--AA--AT-TTTCC-A---CGT-T-AA-AG-A---AAC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 53993 49 -     65740 CCAGTGGC--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24625 49 -     75513 CCAGTGGC--------C-----TCCTCTTGGTTCTTTGC-A--AA--AT-TTTCC-A---CGT-T-AA-AG-A---AAC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48820 49 -     97555 CCAGTGGC--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5544 49 +     30972 CCAGTGGC--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43264 49 -     52037 CCAGTGGC--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59667 49 -    111500 CCAGTGGC--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247462 45 - 206538554 CTAGTGGG--------C-----CTCTCT--TTCCTCAGG-A--AA--T---TTTT-C---GAC-T-AA-AG-A---CAT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117248 45 - 205367284 CTAGTGGG--------C-----CTCTCT--TTCCTCAGG-A--AA--T---TTTT-C---GAC-T-AA-AG-A---CGT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28346 45 -     30238 CTAGTGGG--------C-----CTCTCT--TTCCTCAGG-A--AA--T---TTTT-C---GAC-T-AA-AG-A---CGT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922623 50 -   3816255 ACA-TAGG--------T-----TTCCCTTGTTCCTTAGC-A--AAAAAA-TTTCT-A---CAC-T-AA-AG-A---AGC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126284 37 -    137831 --------------------------TTTGTTGTTTAGC-A--AA--AT-TTTCC-A---CAT-T-AG-AGAA---AAC
i Galago_moholi.ctg3793                                  I 6 C 0
s Galago_senegalensis.k141_991736                             9829 37 +     22493 --------------------------TTTGTTGTTTAGC-A--AA--AT-TTTCC-A---CAT-T-AG-AGAA---AAC
i Galago_senegalensis.k141_991736                        I 6 C 0
s Galagoides_demidoff.k141_561628                            21899 37 -     32986 --------------------------TTTGTTGTTTAGC-A--AA--AT-TTTCC-A---CAT-T-AG-AGAA---AAC
i Galagoides_demidoff.k141_561628                        I 6 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1796 49 -     28519 CCAATGGG--------C-----TTCTCTTGTTCCTTAGC-A--GA--AT-TTTCC-A---CAT-T-AA-AG-A---AGA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92077 54 -     95226 CCAGTGGG--------CATGGCATCCCTTATTCCTTTGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            35112 51 -     36801 CCAGTGGG--------C-----TTCTCTTGTTCCTTAGC-AAGAA--AT-AGTCC-A---CAT-T-AA-AG-G---AAC
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6424 49 -      8343 CTAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255439 49 - 186649187 CTAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2593 51 -     78134 CTAGTGAG--------C-----TTCTCTTGTTCCTTAGG-AAGAA--AT-ATTCC-A---CAT-T-AA-AG-G---AGC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15355 49 -     40692 CCAGTAGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTTC-A---CAT-T-AA-AG-A---AAC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36757 49 +     49394 CCAGTAGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTTC-A---CAT-T-AA-AG-A---AAC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61625 49 -     66874 CCAGTAGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTTC-A---CAT-T-AA-AG-A---AAC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10499 49 -     42923 CCAGTAGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTTC-A---CAT-T-AA-AG-A---AAC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17498 49 -     53142 CCAGTAGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTTC-A---CAT-T-AA-AG-A---AAC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31439 44 -    327341 CTAGTGGG--------C-----CTCTCTTTTTCCTCAGG-A--AG--TT-TTTTT-G---CAC-T-AA-A---------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9751 54 +     48891 CCAGTGGG--------CATGGCATCTCTTATTCCTCAGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933036 48 -  22651954 ACA-CAGG--------T-----TTCTCTTGTTCCTTAGC-A--AA--AA-TTTCT-A---CAC-T-AA-AG-A---AGC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                 285 50 +      8654 CTGGTGGC--------C-----TTCCCTTGTTCCACTGG-A--GA-CAT-TTTCC-A---CAG-T-GA-AG-C---agc
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 I 88
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8264 49 -     36432 CCAGTGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-TTTCC-A---CAA-T-AA-AG-A---AGC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552256 49 -   1711038 ACAGTGGG--------C-----TTCTGTTGTTCTTTTGG-G--AA--GT-TTCCC-A---CAT-G-AA-AG-A---AGC
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1694 49 -      2730 ACAGTGGG--------C-----TTCTGCTGTTCTTTAGG-G--AA--GT-TTCCC-A---CAT-G-AA-AG-A---AGC
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143448 49 -    630532 CCAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70604 49 +     83186 CTAGTGGG--------C-----CTTTCTTGTTCGTCAGG-A--AA--TT-TTTCT-T---CAC-T-AA-AG-A---GGT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72497 48 +    143317 ACT-TAGG--------T-----TTCTCTTGTTCCTTAGC-A--AA--AA-TTTCC-A---GAT-T-AA-AG-A---AGC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6482 49 +     12352 CCAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13666 49 +     55766 CCAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053266 49 + 191637585 CCAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802144 49 +  11177569 CCAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7785 48 -    135385 ACA-TAGG--------T-----TTCCCTTGTACCTTAGC-A--AA--AA-TTTTC-A---CAG-T-AA-AG-A---AAT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387495 24 +   7955117 CCTGTGGG--------C-----TTCTCTTGTACCTTA------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 18
s Indri_indri.k141_2415743                                    3055 49 +     11955 CCGGTGGG--------C-----TCCTCTTGGTTCTTAGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAA
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10664 47 -     16823 CCAGTGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-TTTCC-A---CAT-T-AA-AG-A---A--
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240512 50 +   9596543 CCTGTGGG--------C-----TTTTCATGTTTCTTAGC-A--AG--AT-TTTCC-A---CATCT-AA-AG-A---GTC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72504 47 -     97402 CCAATGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-TTTCC-A---CAT-T-AA-AG-A---A--
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43884 49 +    110728 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AC-TTTCC-A---CAT-T-AA-AG-A---AAC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    32795 49 -     49555 CCAGTGGG--------C-----TTCTCTTGTTTCTTAAG-A--AA--AT-TTTCT-A---CGT-C-AA-AG-A---AGC
i Lasiurus_borealis.LasBor_scaffold_26245                I 57 I 29
s Lemur_catta.scaffold_24                                 14760148 49 +  30322482 CCAGTAGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4789 47 -     13097 CCAGTGGG--------C-----ATCTC--GTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4543 47 +      5940 CCAGTGGG--------C-----ATCTC--GTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4366 47 -      5717 CCAGTGGG--------C-----ATCTC--GTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10756 49 -     11567 CCAGTGGG--------C-----ATCTCTCGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-CA-AG-A---AAC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12137 49 -     12945 CCAGTGGG--------C-----ATCTCTCGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-CA-AG-A---AAC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9660 49 +     29618 CCAGTGGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9656 49 +     31569 CCAGTGGA--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9666 49 +     24756 CCAGTGGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9666 49 +     16388 CCAGTGGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814139 49 -   3914936 CTAGTGGG--------C-----TTCTCTTGTTCTTCAGG-A--AA--AG-TTTTT-G---TAC-T-AA-AG-A---AGT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18508 49 +     24238 CCAGTGGG--------C-----TGTTCTTGTTCTTGAGT-A--AA--AT-TTTCC-G---TAT-T-AA-AG-A---AGC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341849 47 +    662738 CCAGTGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-Ttttc-a---cat-t-aa-ag-a---a--
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334803 49 -   1826925 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           11982 37 +     19643 --------------------------TTTGTTGTTTAGC-A--AA--AT-TTTCC-A---CAT-T-AG-AGAA---AAC
i Loris_lydekkerianus.k141_2031736                       I 6 C 0
s Loris_tardigradus.ctg83                                  5045652 37 -   6120653 --------------------------TTTGTTGTTTAGC-A--AA--AT-TTTCC-A---CAT-T-AG-AGAA---AAC
i Loris_tardigradus.ctg83                                I 6 C 0
s Loxodonta_africana.GL010049.1                           39085058 50 +  43346337 CTACTGGG--------C-----TTCCCTTGTTCCTCTGG-A--AA-CAT-TTTCC-A---TAT-T-AA-AG-A---AAC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615305 42 +  59628241 CTAGTAGG--------C-----TTCTCTTGTTCCTCAGG-A--AA--AG-TTTTT-G---TAC-T-A------------
i Lycaon_pictus.CM007581.1                               C 0 I 4
s Macaca_arctoides.k141_1757516                              46192 49 -     61512 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373854 49 -  60120075 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26122 49 +     30207 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                             960 49 -      5035 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26075 49 +     30527 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37251 49 -     50087 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  46995 49 +     51645 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416198 49 - 187317192 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400428 49 +  25927173 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49600 49 -     62418 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2131 49 +     14901 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46072 49 +     59329 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  271980 49 +    668171 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   618 49 -      5049 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3778 49 +     17132 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223864 50 -    270270 ACAGTGAG--------C-----TTCTCTTTTTCCTTAGG-A--AA--GT-TTTCT-A---CAT-T-AAAAA-A---AGC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323268 49 +  24302211 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358099 49 -    752769 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674192 49 -    737560 CCACTGGG--------A-----TTTTCTTGTTCCTTAGG-A--AA--AA-TTTCC-G---CAT-T-AA-AG-A---AGG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221488 49 +    317179 CCACTGGG--------A-----TTTTCTTGTTCCTTAGG-A--AA--AA-TTTCC-A---CAT-T-AA-AG-A---AGG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501713 24 +  40650429 CCTGTGGG--------C-----TTCTCTTGTACTTTA------------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 17
s Megaderma_lyra.MegLyr_scaffold_4542                       151034 49 +    207569 CCAGTGGG--------G-----TTTTCTTGTTCTTTAGG-A--AA--GT-TTTCC-A---CAT-T-AA-AG-A---ATG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26856 49 -     74585 CTAGTGGG--------A-----TTCTCCTGTTACTCAGG-A--AA--AG-TTTTT-G---TAC-T-AA-AG-A---AGT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50847 23 -    140813 --------------------------------------------A--ACCCTCCC-A---GGC-TGAA-GG-A---CAC
i Meriones_unguiculatus.MerUng_scaffold_7390             I 29 C 0
s Mesocricetus_auratus.KB708134.1                         17429915 21 +  29670104 --------------------------------------------A--AT-CTCCC-A---CGT-T-AA-AG-A---CAC
i Mesocricetus_auratus.KB708134.1                        I 30 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88133 47 +     93471 CCAGTGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-TTTCC-A---CAT-T-AA-AG-A---A--
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10923 49 +     17804 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-CA-AG-A---AAC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11423 49 -     12984 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-CA-AG-A---AAC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19739 49 -     26561 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-CA-AG-A---AAC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985498 49 +  93316391 CCAGTGGG--------C-----TCCTCTTGCTTCTTAGC-A--AT--AT-TTTCC-A---CGT-T-AA-AG-A---AAC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47438 40 +    145209 -----------------------TCCCTTGTTGCTCTGG-A--AA-CGT-TTCCC-A---CTC-T-AG-GA-A---AGT
i Microgale_talazaci.MicTal_scaffold_6613                I 8 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185721 49 +    200668 CCAGTGGG--------T-----TTCCCTCGTTCCTTAAG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963096 21 +  27267610 GTTGTAGG--------T-----CTCTCTTACACT---------------------------------------------
i Microtus_ochrogaster.CM001695.1                        I 10 I 14
s Miniopterus_natalensis.LDJU01000034.1                    6363877 48 -   8254450 CCAGTGGG--------T-----TTCTCTTGTTCCTTAAG-A--AA--AT-GTGCC-A---CAT-T-AA--G-G---AGC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42784 48 -     48117 CCAGTGGG--------T-----TTCTCTTGTTCCTTAAG-A--AA--AT-GTGCC-A---CAT-T-AA--G-G---AGC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23302 49 -     27822 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9150 49 +     27589 CTAGTGGG--------C-----TTCTCTTGTTCTTCAGG-A--AA--AG-TTTTT-G---TAC-T-AA-AG-A---AGT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53281 49 -     62432 CCAGTGGG--------C-----TCCTCTTGCTTCTTAGC-A--AC--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360238 47 +    437263 CCAGTGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-TTTCC-A---CCT-T-AA-AG-A---A--
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179948 49 +    366855 CCAGTGGG--------T-----TTCTCTTGTTCCTTAAG-A--AA--AT-GTTCC-A---CAA-T-AA-AG-A---AGC
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26197 54 -     82753 CCAGTGGG--------CATGGTATCCCTTATTCCTTAGG-A--AA--AA-TTTCC-A---CAT-T-AA-AG-A---AGT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19164 44 -     63510 CTAGTGGG--------C-----CTCTCTTTTTCCTCAGG-A--AG--TT-TTTTT-G---CAC-T-AA-A---------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 2
s Murina_feae.MurFea_scaffold_17764                          39843 49 +     47283 CCAGTGGG--------C-----TTATCTTGCTCCTTCAG-A--AA--AT-TTTCT-A---CAT-T-AA-AG-A---AGC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593824 19 + 120012414 ------------------------------------------------A-CTCCC-A---TGT-T-AA-TG-A---CAC
i Mus_caroli.LT608237.1                                  I 24 C 0
s Mus_musculus.chr8                                       41688213 19 + 129401213 ------------------------------------------------A-CTCCC-A---TGT-T-AA-TG-A---CAC
i Mus_musculus.chr8                                      I 24 C 0
s Mus_spretus.CM004101.1                                  39497507 19 + 130317789 ------------------------------------------------A-CTCCC-A---TGT-T-AA-CG-A---CAC
i Mus_spretus.CM004101.1                                 I 24 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84151 51 -     86153 CTAGTAGG--------C-----TTCTCTTGTTCCTTAGG-AAGAA--AT-ATTCC-A---CAT-T-AA-AG-G---AAC
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355778 49 +  14710649 CTAGTGGG--------A-----TTCTCTTGTTACTCAGG-A--AA--AG-TTTTT-G---TAC-T-AA-AG-A---AGT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63753 47 +     67721 ACA-CGAG--------T-----GTCTCTTGT-CCTTAGC-A--AA--TT-TTTCC-A---CAA-T-AG-AG-A---AGG
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794099 49 +  10118263 CCAGTGGG--------C-----CTGTCTTGTTCCTTAAG-A--AA--AT-TTTCT-A---CAT-T-AA-AG-A---AGC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388272 49 +   6019432 CCAGTGGG--------C-----CTCTCTTGTTCCttaag-a--aa--at-tttct-a---aat-t-aa-ag-a---agc
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384060 48 +   4330536 CCAGTGGG--------C-----CTGTTTTGTTCCTTAAG-A--AA--AT--TTCT-A---CAT-T-AA-AG-A---AGC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3093 49 +     18357 CCAGTGGG--------C-----CTCTCTTGTTCCTTAAG-A--AA--AT-TTTCT-A---CAT-T-AA-AG-A---AGC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120449 50 +    130748 CCAGTTGG--------C-----TTCTCTTATTAGGCAGG-A--AA-CAT-TTTCC-A---TAT-T-AA-AG-A---AGC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947378 45 +   3037898 CCTGTACA--------C-----TTCTTTTGCTCTT-----A--AC--AT-TTTCC-A---CAC-T-AA-AG-A---AGA
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              29958 49 +     34575 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232904 47 -   7148211 CCAGTGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-TTTCC-g---cat-t-aa-ag-a---a--
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128904 49 -    149072 CCAGTGGG--------T-----TTCTTTTGTTCCCTAAG-A--AC--AT-TGTCC-C---CAC-T-TA-AG-A---CAC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54374 49 -    132029 CCAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10469 49 -     16345 CCAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16354 49 +     22201 CCAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414575 49 -  22158432 CCAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26752 49 -     54323 CCAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198901 42 +   9404916 CTAGTAGG--------C-----TTCTCTTGTTCCTCAGG-A--AA--AG-TTTTT-G---TAC-T-A------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 4
s Nycticebus_bengalensis.LG01                             93638881 37 + 196305487 --------------------------TTTGTTGTTTAGC-A--AA--AT-TTTCC-A---CAT-T-AG-AGAA---AAC
i Nycticebus_bengalensis.LG01                            I 6 C 0
s Nycticebus_coucang.k141_1296080                             1484 37 -      9413 --------------------------TTTGTTGTTTAGC-A--AA--AT-TTTCC-A---CAT-T-AG-AGAA---AAC
i Nycticebus_coucang.k141_1296080                        I 6 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566264 37 - 199412804 --------------------------TTTGTTGTTTAGC-A--AA--AT-TTTCC-A---CAT-T-AG-AGAA---AAC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 6 C 0
s Ochotona_princeps.JH802162.1                             2557562 49 -   3988456 CCAGTGAG--------C-----TCTTCTTGCTCCTGCAT-A--CA--AT-TTTCT-G---CAT-T-AA-AG-A---AGC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055709 47 -  11899542 ACA-TAGG--------T-----GTCTCTTGT-CCTGAGC-A--AA--AT-TTTCC-A---CAA-T-AA-AG-T---AGG
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452567 49 +   2017862 CTAGTGGG--------C-----TTCTCTTGTTCCTCAGG-A--AA--AG-TTTTT-G---TAC-C-AA-AG-A---AGT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         436967 54 -    630418 CCAGTGGG--------CATGGCATCCCTTATTCCTTAGG-A--AA--AG-TTTCC-A---CAT-T-AA-AG-A---AGC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15161 54 +    150152 CCAGTGGG--------CATGGCGTCCCTTATTCCTTTGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93450 21 -    140218 CCTCTGGG--------T-----CTCTCTTACTCC---------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                I 4 I 14
s Onychomys_torridus.OnyTor_scaffold_28377                    4318 21 -     41509 CCTGTGGG--------T-----CTCTCTTACTCC---------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_28377               I 4 I 6
s Orcinus_orca.KB316932.1                                  8103306 47 +  10937097 CCAGTGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-TTtcc-a---cat-t-aa-ag-a---a--
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                350 50 +     11607 TTAGTGAC--------C-----TTCCCTTGTTTCTCTGG-A--AA-CAC-TTTTC-A---TAT-T-AA-AG-A---AGT
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104299 49 - 174332312 CCAGTGGG--------C-----TGTTCTTGTTCTTGAGT-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39946 42 +    559221 CTAGTAGG--------C-----TTCTCTTGTTCCTCAGG-A--AA--AG-TTTTT-G---TAC-T-A------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 4
s Otolemur_crassicaudatus.k141_649260                        41432 37 -     51505 --------------------------TTTGTTGTTTAGC-A--AA--AT-TTTCC-A---CAT-T-AG-AGAA---AAC
i Otolemur_crassicaudatus.k141_649260                    I 6 C 0
s Otolemur_garnettii.GL873799.1                             354435 37 +   1103335 --------------------------TTTGTTGTTTAGC-A--AA--AT-TTTCC-A---CAT-T-AG-AGAA---AAC
i Otolemur_garnettii.GL873799.1                          I 6 C 0
s Ovis_aries.CM001607.2                                   26404871 54 -  44047080 CCAGTGGG--------CATGGCATCTCTTATTCCTCAGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5390 54 +     17875 CCAGTGGG--------CATGGCATCTCTTATTCCTCAGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.KZ622849.1                                 34151 49 -    110857 CTAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Pan_troglodytes.KZ622849.1                             I 135 I 44
s Panthera_onca.PanOnc_flattened_line_3271                   25169 45 -    230217 CTAGTGGG--------C-----CTCTCT--TTTCTCAGG-A--AA--T---TTTT-C---GAC-T-AA-AG-A---CGT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462495 45 -  18783137 CTAGTGGG--------C-----CTCTCT--TTCCTCAGG-A--AA--T---TTTT-C---GAC-T-AA-AG-A---CGT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973154 45 +   8748460 CTAGTGGG--------C-----CTCTCT--TTCCTCAGG-A--AA--T---TTTT-C---GAC-T-AA-AG-A---CGT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616399 54 +   2937107 CCAGTGGG--------CATGGCATCTCTTATTCCTTAGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244100 49 - 183742232 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10562 49 +     21308 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293135 49 -  20919399 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23210 49 -     27687 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16356 49 +     16796 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23167 49 -     23640 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15742 48 +     78924 GCAGTGGG--------C-----CTCTCTTGCTCCTCAGG-A---A--TT-TTTTT-G---CAC-T-AA-AA-A---GGC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27762 37 +     31479 --------------------------TTTGTTGTTTAGC-A--CA--AT-TTTCC-A---CAT-T-AG-AGAA---AAC
i Perodicticus_ibeanus.k141_1921260                      I 6 C 0
s Perodicticus_potto.k141_1854441                            20130 37 -     24908 --------------------------TTTGTTGTTTAGC-A--CA--AT-TTTCC-A---CAT-T-AG-AGAA---AAC
i Perodicticus_potto.k141_1854441                        I 6 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2570 22 +      9367 -------------------------------------------AC--AT-TTTTC-A---CAT-T-AC-AG-A---AGG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247528 21 +  18517816 CCTGTGGG--------T-----CTCTCTTACTCC---------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      I 4 I 6
s Petromus_typicus.PetTyp_scaffold_17301                     32602 48 -     56120 ACA-CAGA--------T-----TTCTCTTGTTCCTTAGC-A--AA--AA-CTTCT-G---TGC-T-AA-AG-A---AGC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4832 47 -     63832 CCAGTGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-TTTCC-A---CAT-T-AA-AG-A---A--
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3389 49 +     55023 CCAGGGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2927 49 -     89929 CCAGGGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3517 49 +     40849 CCAGGGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255192 49 +  14605196 CCAGGGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4689 49 +     22231 CCAGTGTG--------C-----TTCTCTTGTTCCTTAAG-A--AA--AT-TTTCT-A---CAT-T-AA-AG-A---AGC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65507 49 +    207309 CCAGTGTG--------C-----ATCTCCTGTTTCTAAGC-A--AA--AG-TTTCC-A---CAT-A-AA-AG-A---AAC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6599 49 -     25401 CCACTGTG--------C-----ATCTCCTGTTTCTAAGC-A--AA--AG-TTTCC-A---CAT-T-AA-AG-A---AAC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32343 49 +     58159 CCAGTGTG--------C-----ATCTCCTGTTTCTAAGC-A--AA--AG-CTTCC-A---CAT-A-AA-AG-A---AAC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32619 49 +     63561 CCAGTGTG--------C-----ATCTCTTGTTTCTAAGC-A--AA--AG-CTTCC-A---CAT-A-AA-AG-A---AAC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32379 49 +     51148 CCAGTGTG--------C-----ATCTCCTGTTTCTAAGC-A--AA--AG-TTTCC-A---CAT-A-AA-AG-A---AAC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557349 49 -   4542175 CCACTGTG--------C-----ATCTCCTGTTTCTAAGC-A--AA--AG-TTTCC-A---CAT-T-AA-AG-A---AAC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32363 49 +     51125 CCAGTGTG--------C-----ATCTCCTGTTTCTAAGC-A--AA--AG-TTTCC-A---CAT-A-AA-AG-A---AAC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1849 47 +     19503 CCAGTGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-TTTCC-A---CAT-T-AA-AG-A---A--
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8774 56 +     39866 CCAGTGAGAATCAAACC-----ATCTCTTGTTTCTATGC-A--AA--AT-TT-CC-A---CAT-T-AA-AG-A---AAC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3856 56 -      9282 CCAGTGAGAATCAAACC-----ATCTCTTGTTTCTATGC-A--AA--AT-TT-CC-A---CAT-T-AA-AG-A---AAC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43260 56 -     87950 CCAGTGAGAATCAAACC-----ATCTCTTGTTTCTATGC-A--AA--AT-TT-CC-A---CAT-T-AA-AG-A---AAC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43656 54 -     88961 CCAGTGAGAATCAAACC-----ATCTC--GTTTCTATGC-A--AA--AT-TT-CC-A---CAT-T-AA-AG-A---AAC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8352 56 -     39403 CCAGTGAGAATCAAACC-----ATCTCTTGTTTCTATGC-A--AA--AT-TT-CC-A---CAT-T-AA-AG-A---AAC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43303 56 +     87928 CCAGTGAGAATCAAACC-----ATCTCTTGTTTCTATGA-A--AA--AT-TT-CC-A---CAT-T-AA-AG-A---AAC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8351 56 -     60166 CCAGTGAGAATCAAACC-----ATCTCTTGTTTCTATGC-A--AA--AT-TT-CC-A---CAT-T-AA-AG-A---AAC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15288 56 -     67232 CCAGTGAGAATCAAACC-----ATCTCTTGTTTCTATGC-A--AA--AT-TT-CC-A---CAT-T-AA-AG-A---AAC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43204 56 -     90634 CCAGTGAGAATCAAACC-----ATCTCTTGTTTCTATGC-A--AA--AT-TT-CC-A---CAT-T-AA-AG-A---AAC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44671 56 +     89403 CCAGTGAGAATCAAACC-----ATCTCTTGTTTCTATGC-A--AA--AT-TT-CC-A---CAT-T-AA-AG-A---AAC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178578 49 - 189387572 CCAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193395 49 -   9816681 CCAGTGGG--------C-----ATCTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28538 49 +     69807 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45719 49 -     80239 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 4275 50 +      7663 CTGGTGGC--------C-----TTCCCTTGTTCCACTGG-A--GA-CAT-TTTCC-A---CAG-T-GA-AG-C---agc
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 88
s Prolemur_simus.MPIZ01000396.1                            1983296 49 +   4620579 CCAGTAGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566806 49 -   2598838 CCAGTGGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4444 49 -      7103 CCAGTGGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5041 49 -     11706 CCAGTGGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8779 49 -     30655 CCAGTGGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35092 49 +     46564 CCAGTGGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95371 49 -     98465 CCAGTGGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9010 49 +     35169 CCAGTGGG--------C-----TCCTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38123 21 +     52041 CCTGTGGG--------T-----CTCTCTTACTCC---------------------------------------------
i Psammomys_obesus.NESX01036366.1                        I 4 I 27
s Pteronotus_parnellii.KE847780.1                            52841 49 -     66298 CCAGTGGG--------T-----TTCTCTTGTTCCTTAAG-A--AA--AT-TTTCC-A---CAT-T-AA-GG-A---AGG
i Pteronotus_parnellii.KE847780.1                        I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5352 49 -     18639 CTAGTGGG--------A-----TTCTCTTGTTACTCAGG-A--AA--AG-TTTTT-G---TAC-T-AA-GA-A---AGT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841437 49 -  28871421 ACAGTgag--------c-----ttctctttttccttagg-a--aa--gt-tttct-a---ctt-t-aa-ag-a---agc
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3537952 49 -   4952924 ACAGTgag--------c-----ttctctttttccttagg-A--AA--GT-TTTCT-A---CAT-T-AA-AG-A---AGc
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099811 45 +  38429054 CTAGTGGG--------C-----CTCTCT--TTCCTCAGG-A--AA--T---TTTT-C---GAC-T-AA-AG-A---CGT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27907 49 +     91421 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154391 49 -   7812017 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8764 49 +     72585 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53884 54 +     55069 CCAATGGG--------CATGGCATCCCTTATTCCTTAGG-A--AA--AG-TTTCC-A---CAT-T-AA-AG-A---AGC
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023646 21 -  90668790 --------------------------------------------G--AT-CTCCC-A---TGT-T-AA-TG-A---CAC
i Rattus_norvegicus.chr16                                I 29 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915418 49 +   3329780 CCAGTGGG--------C-----TTCTGTTGTtctttagg-a--aa--gt-tttcc-a---caT-G-AA-AG-A---AGC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2492 49 +      7119 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123108 49 + 195417433 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237334 49 -   7961872 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75936 49 -    116970 ACAGTGAG--------C-----TTCTCTTTTTTCTTAGG-A--AA--GT-TTTCT-A---TAT-T-AA-AG-A---AGC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4663 49 +     27962 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAG-T-AA-AG-A---AAC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4557 49 +      6077 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAG-T-AA-AG-A---AAC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4647 49 +      5971 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAG-T-AA-AG-A---AAC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4568 49 +      5932 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAG-T-AA-AG-A---AAC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2910 49 -      4390 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAG-T-AA-AG-A---AAC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392347 49 - 209938924 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAG-T-AA-AG-A---AAC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4516 49 +      5979 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAG-T-AA-AG-A---AAC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1086 49 -     22275 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAG-T-AA-AG-A---AAC
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8559 54 +     16473 CCAGTGGG--------CATGACATCCCTTATTCCTTAGG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109683 49 + 121099817 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--TA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31250 49 -     47369 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--TA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31636 49 -     79414 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--TA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28327 49 -     34454 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--TA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15728 49 -     22428 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--TA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30882 49 -     47109 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--TA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238928 49 +   5703754 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-GA-AG-A---AAC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8518 49 +     21866 CCAGTGGG--------C-----ATCTCTTGTTTCTAAGC-A--CA--AT-TTTCC-A---CAT-T-GA-AG-A---AAC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116580 49 +    313613 CCATTGGG--------C-----TTCTCTTGTTCCTTAGG-A--AA--AT-TTTCT-G---CAT-T-AA-AG-A---AGT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26233 49 +     27374 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29745 49 +     58920 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16243 49 -     45317 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23901 49 -     42441 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26579 49 -     29113 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29654 49 -     48123 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49901 21 +     77746 TTCACAGG--------T-----TTTTCTTATTCC---------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                I 4 I 6
s Solenodon_paradoxus.SolPar_flattened_line_126            1864852 49 -   1910179 CCAGTGGG--------C-----TTTTCTTGTTCCTTAGG-A--AA--AT-TTTCT-G---CAT-T-AA-AG-A---CTT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4671964 41 +  18376816 ----------------------TTGTCATCTTCGTTAAAGA--AA--AA-TTTCT-G---CAC-T-AA-AG-C---AGT
i Sorex_araneus.JH798187.1                               I 6 C 0
s Spermophilus_dauricus.KZ294078.1                         1869099 22 +   3870691 -------------------------------------------AC--CT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Spermophilus_dauricus.KZ294078.1                       I 26 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7439 49 -     97271 CTAGTGGC--------C-----TTCTCTTGTTACTCAGG-A--AA--AG-TTTTT-G---TAC-T-AA-AG-A---AGT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125580 44 +    196729 CTAGTGGG--------C-----CTCTCTTTTTCCTCTGG-A--AG--TT-TTTTT-G---CAC-T-AA-A---------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                    6644466 49 +  69701581 CCAGTGGA--------T-----ATCTCTTATTACTTAGG-A--AA--AT-TTTCT-G---CAT-T-AA-AG-A---AGT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391834 49 +   1523678 CCAGTGGG--------C-----ATCTCTTGTTTCTTTGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15012 49 +     22964 CCAGTGGG--------T-----TTCTCTTGTTCCCTAAG-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AGA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3440 50 +      5583 CCAGTTGG--------C-----TTCTCTTATTCGGCAGG-A--AA-CAT-TTTCC-A---TAT-T-AA-AG-A---AGC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192319 49 +    199430 CCAGTGGG--------C-----TTCCCTTGCTCCTTAGG-A--AA--AT-TTTCT-G---CAT-T-CC-AG-A---AGC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106287 49 -    539355 CCAGTGGG--------C-----TTCCCTTGCTCCTTAGG-A--AA--AT-TTTCT-G---CAT-T-CC-AG-A---AGC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1353 49 +      9917 CCAGTGGG--------C-----TTGTCTTGCATCTTAGC-A--AA--AT-TTTCC-A---TAT-T-AA-AT-G---AAC
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8151 49 +     20590 CCAGTGGG--------C-----TTGTCTTGCATCTTAGC-A--AA--AT-TTTCC-A---TAT-T-AA-AT-G---AAC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354086 49 - 186847797 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24776 48 -     33621 TCA-TGGA--------T-----TTCTCTTGTTCCTTAGC-A--AA--AA-TTTCT-A---CAT-T-AA-AG-A---AGC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20428 50 -     31044 CCAGTGGG--------C-----TTCTCTCGTTCCTCAGG-A--GA-TGC-TTTCC-A---CCT-T-AA-AG-A---AGC
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480839 49 -    610378 CCAGTGGG--------T-----TTCCCTCGTTCCTTAAG-A--AA--AT-TTTCC-A---CGT-T-AA-AG-A---AGC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21778 49 +     26378 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34454 49 -     78344 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21103 49 +     25722 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29410 49 -     62838 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29454 49 +     46913 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10263 49 -     28527 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31345 49 -     64340 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29383 49 -     63452 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10830 49 +     22490 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4253 49 -      6147 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11166 49 -     13050 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256396 49 -   6242583 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2424 49 +     19340 CCAGTGGG--------C-----ATCTCTTGTTTCTTAAC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-A---AAT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174173 49 -    200418 TAAGTGGG--------C-----ATCACTTGTTCCTTAGG-A--AA--AT-TTTCC-A---CTT-T-AA-AG-G---AGG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6481800 50 -  10818551 CTAGTAGG--------G-----TTCCCTCGTTCCTCTGG-A--AA-CAT-TTTCC-A---CAT-T-AA-AG-A---AGT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835076 49 -   4065304 TCAGTGgg--------c-----ttttcttgtttcttagc-a--aA--AT-TTTCC-A---CAT-G-AA-AG-A---AGC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9096 49 -     70247 TCAGTGGG--------C-----TCTTCTTGTTTCTTAGC-A--AA--AT-TTTCC-A---CTT-G-AA-AG-A---AGC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366419 47 -  33153633 CCAGTGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-TTtcc-a---cat-t-aa-ag-a---a--
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4305 48 -     21056 C-AGTGGG--------C-----TTCTCTTGTTTCTTAGG-A--AA--AA-TTTGT-G---CAT-T-AA-AG-A---AAT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182742 49 +   5085361 CTAGTGGG--------C-----TTCTCTTGTTCCTCGGG-A--AA--AG-TTTTT-G---TAC-T-AA-AG-A---AGt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  25952 49 -     30710 CCAGTGGG--------C-----TCTTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-G---AAC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24859 49 -    147434 CCAGTGGG--------C-----TCTTCTTGGTTCTTAGC-A--AA--AT-TTTCC-A---CAT-T-AA-AG-G---AAC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   76999 49 +   5488506 CCAATGGG--------C-----GTCTCTTGTTCCTTAGG-A--AA--AT-TTTCT-G---CAT-T-AA-AT-A---AGT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105667 42 -    112863 CTAGTAGG--------C-----TTCTCTTGTTCCTCAGG-A--AA--AG-TTTTT-G---TAC-T-A------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 4
s Xerus_inauris.XerIna_scaffold_2302                        174880 22 -    224448 -------------------------------------------AC--CT-TTTCC-A---CAT-T-AA-AG-A---AAC
i Xerus_inauris.XerIna_scaffold_2302                     I 26 I 2
s Zalophus_californianus.ZalCal_flattened_line_17732         29775 49 -     86975 CTAGTGGG--------C-----TTCTCTTGTTCCTCAGG-A--AA--AG-TTTTT-G---TAC-T-AA-AG-A---AGT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       695 50 -      1899 CCCGTGGG--------C-----TTTTCATGTCTCTTAGC-A--AG--AT-TTTCC-A---CATTT-AA-AG-A---AGC
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1703 47 +      2126 CCAGTGGG--------C-----ATCTCTTGTTCCTTAGG-A--GA--AT-TTTCC-A---CAT-T-AA-AG-A---A--
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6173 2 +     36723 GC
s Acinonyx_jubatus.LLWD01001279.1                           813598 2 +   1699592 CT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25841 2 +     63021 AT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416055 2 +  29979442 ct
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216400 2 +    347723 ct
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18783 2 -     61208 AC
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48818 2 +     53615 GC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           849 2 +     13857 GC
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17400 2 -     21945 GC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19085 2 +     32033 GC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72919 2 -     84148 CC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45158 2 -     78289 CC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44597 2 +     55831 CC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43047 2 -     64179 CC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            150 2 -      3959 cc
i Alouatta_macconnelli.k141_1277969                      n 2 I 7
s Alouatta_nigerrima.k141_376068                             41672 2 +     45454 CC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47321 2 +     70886 CC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9494 2 +     30854 CC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33628 2 +     42133 CC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586058 2 +   2318259 tt
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177851 2 -    412891 CT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51165 2 -     68529 TT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1885 2 +     17741 CC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2510 2 -     15923 CC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672792 2 +   5030052 Cc
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2786 2 -     16391 CC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2345 2 -     17186 CC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16861 2 -     32367 AT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20953 2 -     45910 AC
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6117 2 -     15198 CT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275382 2 +  21539123 CC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11550 2 +     48076 CC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6685 2 -     28759 CC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34239 2 +     44353 CC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49610 2 -     71267 CC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23668 2 -     33135 CC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6960 2 +     11645 CC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6968 2 -     19611 CC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87066 2 +    124022 TT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22608 2 +    288883 TT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20356998 2 +  48749331 TT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755562 2 +   1948126 TT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545704 2 -  45695690 TT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530719 2 -   4408762 TT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8558 2 +     28062 CT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43852 2 -     91139 CT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21378 2 +     95584 CT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21291 2 +    119600 CT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10865 2 +     18648 CC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10399 2 -     13885 CC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2470 2 -      8861 CC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454862 2 + 189096842 CC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2385 2 +      8664 CC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631716 2 +  17673402 ct
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666003 2 +   7040546 CT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209662 2 +   1652518 ct
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506082 2 +  60362399 CT
i CanFam4.chr16                                          I 4 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9718 2 -     23171 CT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 4 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223061 2 +   9314153 CT
i Canis_lupus_dingo.QKWQ01000480.1                       I 4 C 0
s Canis_lupus_familiaris.chr16                            41616196 2 +  59632846 CT
i Canis_lupus_familiaris.chr16                           I 4 C 0
s Canis_lupus_orion.HG994398.1                            45107777 2 -  63665305 CT
i Canis_lupus_orion.HG994398.1                           I 4 C 0
s Capra_aegagrus.CM003241.1                               27409787 2 -  46296322 TT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592061 2 +  44709034 TT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    230 2 -      1607 CT
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271170 1 +    496798 c-
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                973 2 +      9923 CT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28370 2 -     39886 CC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80258 2 -    217609 CT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997100 2 +  23392119 ct
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000541 2 +  23407841 ct
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63622 2 -     66877 CT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5783 2 -     12580 CC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43840 2 +     53515 CC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373603 2 -  26074798 CC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8657 2 -     34880 CC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67753 2 -     89041 CC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3130 1 -      5494 C-
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492883 2 -  27778364 CC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19716 2 +     27315 CC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141967 2 -   4669795 gc
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45711 2 +     47900 GC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1139 2 -     14410 GC
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45523 2 -    148725 GC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27732 2 -     40656 GC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7696 2 +     20796 GC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12814 2 -     17524 GC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28537 2 -     34525 GC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12317 2 -     25376 GC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364904 2 -  39242232 GC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270631 2 +  21565898 GC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        32999 2 -     45857 GC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27900 2 -     32606 GC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4062 2 +      8499 GC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26458 2 +     70610 GC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23419 2 +     36323 GC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13399 2 -     19938 CC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31334 2 -     33796 CC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5848 2 -     15404 CC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9665 2 -     32913 CT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20078 2 -     40346 CT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20333 2 +    216457 CT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20126 2 +     39636 CT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239468 2 -   2543920 ct
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4714 2 +      5346 CC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43189 2 -    112038 CT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8740 2 +     34062 CT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344320 2 +  18827391 GC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10864 2 -     44032 GC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305645 2 - 135778131 gc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15530 2 +     15858 CC
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607105 2 -    839153 CC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2219 2 +      2406 CC
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             410050 2 -   2368649 ac
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379931 2 - 200372422 AC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3488 2 -     84244 AC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807953 2 +  53390261 gt
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3484 2 -      8242 CT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44878 2 -     83289 TC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115555 2 - 224834208 TC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10069 2 +     12657 CT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646109 2 -   1526836 CC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19017 2 +     50838 CT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5025 2 +     36344 CT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28802 2 +     75252 CT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110750 2 -   2246927 CC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293270 2 +  12879189 CC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866040 2 -  20541912 CT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665167 2 -   1390856 CC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139960 2 -    198055 CC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99550 2 -    115145 CT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951246 2 -  37912305 CC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6178 2 -     10735 TC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856243 2 - 111700974 CC
i Echinops_telfairi.JH980293.1                           C 0 I 1
s Eidolon_helvum.AWHC01266696.1                               6946 2 +     19438 ct
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240425 2 -    607251 TT
i Elaphurus_davidianus.JRFZ01104969.1                    I 3 C 0
s Elephantulus_edwardii.JH947257.1                         1226433 2 +  10337057 CC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31689 2 +    110024 TC
i Ellobius_lutescens.LOEQ01008920.1                      I 14 C 0
s Ellobius_talpinus.LOJH01026522.1                           13660 2 +     18970 TC
i Ellobius_talpinus.LOJH01026522.1                       I 14 C 0
s Enhydra_lutris.KZ291758.1                               24916806 2 +  41312741 ct
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579589 2 +  14770903 ct
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042088 2 -   4378816 CC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376026 2 +  39960074 cc
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412008 2 -    498745 cc
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666730 2 +   7059049 CT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263856 2 +  21539334 GC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               15475 2 -     24895 CC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43185 2 -     70999 CC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87155 2 +    112731 CC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43717 2 +     68309 CC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54042 2 -     65740 CC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24674 2 -     75513 CC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48869 2 -     97555 CC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5593 2 +     30972 CC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43313 2 -     52037 CC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59716 2 -    111500 CC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247507 2 - 206538554 CT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117293 2 - 205367284 CT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28391 2 -     30238 CT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922673 2 -   3816255 CT
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126321 2 -    137831 GC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9866 2 +     22493 GC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21936 2 -     32986 GC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1845 2 -     28519 TT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92131 2 -     95226 TT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            35163 2 -     36801 CC
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6473 2 -      8343 CC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255488 2 - 186649187 CC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2644 2 -     78134 CT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15404 2 -     40692 CC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36806 2 +     49394 CC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61674 2 -     66874 CC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10548 2 -     42923 CC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17547 2 -     53142 CC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31485 2 -    327341 CT
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9805 2 +     48891 TT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933084 2 -  22651954 CT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                 423 2 +      8654 CT
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 88 I 502
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8313 2 -     36432 CC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552305 2 -   1711038 CT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1743 2 -      2730 CT
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143497 2 -    630532 CC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70653 2 +     83186 CT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72545 2 +    143317 CT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6531 2 +     12352 CC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13715 2 +     55766 CC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053315 2 + 191637585 CC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802193 2 +  11177569 CC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7833 2 -    135385 CT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Indri_indri.k141_2415743                                    3104 2 +     11955 CC
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240562 2 +   9596543 CC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43933 2 +    110728 CC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63570 2 -     65777 CT
i Lasiurus_borealis.LasBor_scaffold_16567                I 49 C 0
s Lemur_catta.scaffold_24                                 14760197 2 +  30322482 CC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4836 2 -     13097 CC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4590 2 +      5940 CC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4413 2 -      5717 CC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10805 2 -     11567 CC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12186 2 -     12945 CC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9709 2 +     29618 CC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9705 2 +     31569 TC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9715 2 +     24756 CC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9715 2 +     16388 CC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814188 2 -   3914936 ct
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18557 1 +     24238 -C
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lophocebus_aterrimus.ctg367                               334852 2 -   1826925 GC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12019 2 +     19643 AC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045689 2 -   6120653 AC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085108 2 +  43346337 GC
i Loxodonta_africana.GL010049.1                          C 0 I 484
s Lycaon_pictus.CM007581.1                                41615351 2 +  59628241 CT
i Lycaon_pictus.CM007581.1                               I 4 C 0
s Macaca_arctoides.k141_1757516                              46241 2 -     61512 GC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373903 2 -  60120075 GC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26171 2 +     30207 GC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1009 2 -      5035 GC
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26124 2 +     30527 GC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37300 2 -     50087 GC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47044 2 +     51645 GC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416247 2 - 187317192 gc
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400477 2 +  25927173 gc
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49649 2 -     62418 GC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2180 2 +     14901 GC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46121 2 +     59329 GC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272029 2 +    668171 GC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   667 2 -      5049 GC
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3827 2 +     17132 GC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223914 2 -    270270 CT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323317 2 +  24302211 GC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358148 2 -    752769 GC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674241 2 -    737560 CC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221537 2 +    317179 CC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151083 2 +    207569 CT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26905 2 -     74585 CT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50870 2 -    140813 TC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429936 2 +  29670104 TC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mico_argentatus.k141_582562                                10972 2 +     17804 TC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11472 2 -     12984 CC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19788 2 -     26561 CC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985547 2 +  93316391 ct
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47478 2 +    145209 CC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_2233                185770 2 +    200668 CT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963131 2 +  27267610 TC
i Microtus_ochrogaster.CM001695.1                        I 14 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363925 2 -   8254450 CT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42832 2 -     48117 CT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23351 2 -     27822 GC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9199 2 +     27589 CT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53330 2 -     62432 CT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179997 2 +    366855 CT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26251 2 -     82753 TT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19210 2 -     63510 CT
i Mungos_mungo.MunMun_flattened_line_18455               I 2 C 0
s Murina_feae.MurFea_scaffold_17764                          39892 2 +     47283 CT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593843 2 + 120012414 TC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688232 2 + 129401213 TC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497526 2 + 130317789 TC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84202 2 -     86153 TG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355827 2 +  14710649 ct
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63800 2 +     67721 CT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794148 2 +  10118263 Ct
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388321 2 +   6019432 ct
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384108 2 +   4330536 Ct
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3142 2 +     18357 CT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120499 2 +    130748 CC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947423 2 +   3037898 TC
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30007 2 +     34575 AC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128953 2 -    149072 CT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54423 2 -    132029 CC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10518 2 -     16345 CC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16403 2 +     22201 CC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414624 2 -  22158432 CC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26801 2 -     54323 CC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198947 2 +   9404916 CT
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 4 C 0
s Nycticebus_bengalensis.LG01                             93638918 2 + 196305487 AC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1521 2 -      9413 AC
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566301 2 - 199412804 AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557611 2 -   3988456 TC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055756 2 -  11899542 Ct
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452616 2 +   2017862 ct
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437021 2 -    630418 TT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15215 2 +    150152 TT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93485 2 -    140218 TC
i Ondatra_zibethicus.OndZib_scaffold_7387                I 14 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                400 2 +     11607 CC
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104348 1 - 174332312 -C
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39992 2 +    559221 CT
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 C 0
s Otolemur_crassicaudatus.k141_649260                        41469 2 -     51505 AC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354472 2 +   1103335 AC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404925 2 -  44047080 TT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5444 2 +     17875 TT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473517 2 - 189151597 cc
i Pan_troglodytes.CM009242.2                             I 69 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25214 2 -    230217 CT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462540 2 -  18783137 CT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973199 2 +   8748460 CT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616453 2 +   2937107 TT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244149 2 - 183742232 gc
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10611 2 +     21308 GC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293184 2 -  20919399 GC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23259 2 -     27687 GC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16405 2 +     16796 GC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23216 2 -     23640 GC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15790 2 +     78924 CT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27799 2 +     31479 AC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20167 2 -     24908 AC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2592 2 +      9367 TC
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32650 2 -     56120 CT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                            3438 2 +     55023 GC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2976 2 -     89929 GC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3566 2 +     40849 GC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255241 2 +  14605196 gc
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4738 2 +     22231 CT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65556 2 +    207309 CT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6648 2 -     25401 CT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32392 2 +     58159 CT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32668 2 +     63561 CT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32428 2 +     51148 CT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557398 2 -   4542175 CT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32412 2 +     51125 CT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8830 2 +     39866 CT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3912 2 -      9282 CT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43316 2 -     87950 CT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43710 2 -     88961 CT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8408 2 -     39403 CT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43359 2 +     87928 CT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8407 2 -     60166 CT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15344 2 -     67232 CT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43260 2 -     90634 CT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44727 2 +     89403 CT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178627 2 - 189387572 CC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193444 2 -   9816681 CC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28587 2 +     69807 AC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45768 2 -     80239 AC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 4413 2 +      7663 CT
i Procavia_capensis.ProCapCap_scaffold_165387            I 88 I 502
s Prolemur_simus.MPIZ01000396.1                            1983345 2 +   4620579 Cc
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566855 2 -   2598838 CC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4493 2 -      7103 CC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5090 2 -     11706 CC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8828 2 -     30655 CC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35141 2 +     46564 CC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95420 2 -     98465 CC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9059 2 +     35169 CC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38171 2 +     52041 TC
i Psammomys_obesus.NESX01036366.1                        I 27 C 0
s Pteronotus_parnellii.KE847780.1                            52890 2 -     66298 CT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5401 2 -     18639 CT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841486 2 -  28871421 ct
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538001 2 -   4952924 ct
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099856 2 +  38429054 CT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27956 2 +     91421 AC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154440 2 -   7812017 AC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8813 2 +     72585 AC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53938 2 +     55069 TT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023667 2 -  90668790 TC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915467 2 +   3329780 CT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2541 2 +      7119 AC
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123157 2 + 195417433 ac
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237383 2 -   7961872 AC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75985 2 -    116970 CT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4712 2 +     27962 CC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4606 2 +      6077 CC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4696 2 +      5971 CC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4617 2 +      5932 CC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2959 2 -      4390 CC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392396 2 - 209938924 CC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4565 2 +      5979 CC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1135 2 -     22275 CC
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8613 2 +     16473 TT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109732 2 + 121099817 Cc
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31299 2 -     47369 CC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31685 2 -     79414 CC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28376 2 -     34454 CC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15777 2 -     22428 CC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30931 2 -     47109 CC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238977 2 +   5703754 CC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8567 2 +     21866 CC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116629 2 +    313613 GT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26282 2 +     27374 AC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29794 2 +     58920 AC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16292 2 -     45317 AC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23950 2 -     42441 AC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26628 2 -     29113 AC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29703 2 -     48123 AC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864901 2 -   1910179 CT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672005 2 +  18376816 CT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869121 2 +   3870691 TC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7488 2 -     97271 AT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125626 2 +    196729 CT
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                    6644515 2 +  69701581 CT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391883 2 +   1523678 CC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15061 2 +     22964 CT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3490 2 +      5583 CC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192368 2 +    199430 CC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106336 2 -    539355 CC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1402 1 +      9917 C-
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8200 1 +     20590 C-
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354135 2 - 186847797 gc
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24824 2 -     33621 CT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20478 2 -     31044 CC
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480888 2 -    610378 CT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21827 2 +     26378 AC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34503 2 -     78344 AC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21152 2 +     25722 AC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29459 2 -     62838 AC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29503 2 +     46913 AC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10312 2 -     28527 AC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31394 2 -     64340 AC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29432 2 -     63452 AC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10879 2 +     22490 AC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4302 2 -      6147 AC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11215 2 -     13050 AC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256445 2 -   6242583 AC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2473 2 +     19340 AC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174222 2 -    200418 CT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6481850 2 -  10818551 CC
i Trichechus_manatus.JH594705.1                          C 0 I 461
s Tupaia_chinensis.KB320699.1                              1835125 2 -   4065304 CC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9145 2 -     70247 CC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4353 2 -     21056 GT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182791 2 +   5085361 ct
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26001 2 -     30710 CC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24908 2 -    147434 CC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77048 2 +   5488506 ct
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105713 2 -    112863 CT
i Vulpes_lagopus.VulLag_flattened_line_12041             I 4 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29824 2 -     86975 CT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       745 2 -      1899 CC
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Ziphius_cavirostris.ZipCav_flattened_line_504766            1750 0 +      2126 C
e Xerus_inauris.XerIna_scaffold_2302                        174902 2 -    224448 I
e Tursiops_truncatus.MRVK01000835.1                       17366466 0 -  33153633 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922 6 +     77746 I
e Platanista_gangetica.PlaMin_flattened_line_83166            1896 0 +     19503 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               4879 0 -     63832 C
e Peromyscus_maniculatus.KI615324.1                         247549 6 +  18517816 I
e Orcinus_orca.KB316932.1                                  8103353 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    4339 6 -     41509 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1232951 0 -   7148211 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360285 0 +    437263 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     88180 0 +     93471 C
e Marmota_marmota.CZRN01000018.1                           7501737 17 +  40650429 I
e Lipotes_vexillifer.KE559953.1                             341896 0 +    662738 C
e Kogia_breviceps.KogBre_flattened_line_3970                 72551 0 -     97402 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               10711 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     387519 18 +   7955117 I
e Eubalaena_japonica.EubJap_flattened_line_257991              403 464 -      1072 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           71816 0 -    133382 C
e Delphinapterus_leucas.KZ290073.1                        18632610 0 -  35494412 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5050 0 +     87169 C
e Balaenoptera_bonaerensis.DF411050.1                          702 0 -     25979 C
e Balaenoptera_acutorostrata.KI537508.1                    7964202 0 -  23207421 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6175  7 +     36723 TT-AA-A------------AC
s Acinonyx_jubatus.LLWD01001279.1                           813600  7 +   1699592 TC-AA-A------------AT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25843  7 +     63021 GC-AG-A------------AT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 135
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416057  7 +  29979442 tc-aa-a------------at
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216402  7 +    347723 tc-aa-a------------at
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18785  7 -     61208 TC-AC-A------------TT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48820  7 +     53615 TC-AA-A------------AT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           851  7 +     13857 TC-AA-A------------AT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17402  7 -     21945 TC-AA-A------------AT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19087  7 +     32033 TC-AA-A------------AT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72921  7 -     84148 TG-AA-A------------AT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45160  7 -     78289 TG-AA-A------------GT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44599  7 +     55831 TG-AA-A------------AT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43049  7 -     64179 TG-AA-A------------GT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_361275                           24683  7 -     24835 TG-AA-A------------GT
i Alouatta_macconnelli.k141_361275                       I 2 n 7
s Alouatta_nigerrima.k141_376068                             41674  7 +     45454 TG-AA-A------------GT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47323  7 +     70886 TG-AA-A------------AT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9496  7 +     30854 TG-AA-A------------GT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33630  7 +     42133 TG-AA-A------------GT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586060  7 +   2318259 tc-aa-a------------at
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177853  7 -    412891 TC-AA-A------------AT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51167  7 -     68529 TC-AA-A------------AT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1887  7 +     17741 TC-AA-A------------AT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2512  7 -     15923 TC-AA-A------------AT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672794  7 +   5030052 tc-aa-a------------at
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2788  7 -     16391 TC-AA-A------------AT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2347  7 -     17186 TC-AA-A------------AT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16863  7 -     32367 TA-AG-A------------AT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20955  6 -     45910 T--AA-A------------AT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6119  7 -     15198 TC-AA-A------------AT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275384  7 +  21539123 TC-AA-A------------AT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11552  7 +     48076 TC-AA-A------------AT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6687  7 -     28759 TC-AA-A------------AT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34241  7 +     44353 TC-AA-A------------AT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49612  7 -     71267 TC-AA-A------------AT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23670  7 -     33135 TC-AA-A------------AT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6962  7 +     11645 TC-AA-A------------AT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6970  7 -     19611 TC-AA-A------------AT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964202  4 -  23207421 ----a-a------------at
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          702  4 -     25979 ----a-a------------at
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87068  7 +    124022 TC-AA-A------------AT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22610  7 +    288883 TC-AA-A------------AT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357000  7 +  48749331 TC-AA-A------------AT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755564  7 +   1948126 TC-AA-A------------AT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545706  7 -  45695690 TC-AA-A------------AT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530721  7 -   4408762 TC-AA-A------------AT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8560  7 +     28062 TC-AA-A------------AT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43854  7 -     91139 TC-AA-A------------AT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21380  7 +     95584 TC-AA-A------------AT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21293  7 +    119600 TC-AA-A------------AT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10867  7 +     18648 TC-AA-A------------AT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10401  7 -     13885 TC-AA-A------------AT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2472  7 -      8861 TC-AA-A------------AT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454864  7 + 189096842 TC-AA-A------------AT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2387  7 +      8664 TC-AA-A------------AT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631718  7 +  17673402 tc-aa-a------------at
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666005  7 +   7040546 TC-AG-A------------AT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209664  7 +   1652518 tc-aa-a------------at
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506084  7 +  60362399 TC-AA-A------------AT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9720  7 -     23171 TC-AA-A------------AT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223063  7 +   9314153 tc-aa-a------------at
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616198  7 +  59632846 tc-aa-a------------at
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107779  7 -  63665305 Tc-aa-a------------at
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409789  7 -  46296322 TC-AA-A------------AT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592063  7 +  44709034 TC-AA-A------------AT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    232  7 -      1607 TT-GA-A------------AT
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271171  7 +    496798 tc-aa-a------------at
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                975  7 +      9923 TC-AA-A------------AT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28372  7 -     39886 TC-AG-A------------AT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80260  7 -    217609 TT-AA-A------------AT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997102  7 +  23392119 tc-ag-a------------at
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000543  7 +  23407841 tc-ag-a------------at
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63624  7 -     66877 TC-AG-A------------AT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5785  7 -     12580 TC-AA-A------------AT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43842  7 +     53515 TC-AA-A------------AT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373605  7 -  26074798 TC-AA-A------------AT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8659  7 -     34880 TC-AA-A------------AT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67755  7 -     89041 TC-AA-A------------AT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3131  7 -      5494 TC-AA-A------------AT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492885  7 -  27778364 tc-aa-a------------at
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19718  7 +     27315 TC-AA-A------------AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141969  7 -   4669795 tc-aa-a------------at
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45713  7 +     47900 TC-AA-A------------AT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1141  7 -     14410 TC-AA-A------------AT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45525  7 -    148725 TC-AA-A------------AT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27734  7 -     40656 TC-AA-A------------AT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7698  7 +     20796 TC-AA-A------------AT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12816  7 -     17524 TC-AA-A------------AT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28539  7 -     34525 TC-AA-A------------AT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12319  7 -     25376 TC-AA-A------------AT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364906  7 -  39242232 TC-AA-A------------AT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270633  7 +  21565898 TC-AA-A------------AT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33001  7 -     45857 TC-AA-A------------AT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27902  7 -     32606 TC-AA-A------------AT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4064  7 +      8499 TC-AA-A------------AT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26460  7 +     70610 TC-AA-A------------AT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23421  7 +     36323 TC-AA-A------------AT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13401  6 -     19938 -C-AA-G------------AC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31336  7 -     33796 TC-AA-A------------AT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5850  7 -     15404 TC-AA-A------------AT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9667  7 -     32913 TC-AA-A------------AT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20080  7 -     40346 TC-AA-A------------AT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20335  7 +    216457 TC-AA-A------------AT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20128  7 +     39636 TC-AA-A------------AT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239470  7 -   2543920 TC-AG-A------------AT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4716  7 +      5346 TC-AA-A------------AT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43191  7 -    112038 TC-AA-A------------AT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8742  7 +     34062 TC-AA-A------------AT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344322  7 +  18827391 TC-AA-A------------AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10866  7 -     44032 TC-AA-A------------AT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305647  7 - 135778131 tc-aa-a------------at
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15532  7 +     15858 TC-AA-A------------AT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607107  7 -    839153 TC-AA-A------------AT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2221  6 +      2406 CC-A--A------------AC
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             410052  7 -   2368649 tc-aa-a------------at
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379933  7 - 200372422 TC-AA-A------------AT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3490  7 -     84244 TC-AA-A------------AT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807955  7 +  53390261 tc-aa-a------------at
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3486  7 -      8242 TC-AA-A------------AA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44880  7 -     83289 TC-AG-A------------AT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115557  7 - 224834208 TC-AG-A------------AT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10071  7 +     12657 TC-AG-T------------GT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5050  2 +     87169 -------------------AT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646111  7 -   1526836 TG-AA-G------------AT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19019  7 +     50838 TT-GA-A------------AT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5027  7 +     36344 TC-AG-A------------AT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28804  7 +     75252 TC-AG-A------------AT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110752  7 -   2246927 TC-AA-G------------AT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293272  7 +  12879189 TC-AA-A------------AT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632610  4 -  35494412 ----a-a------------at
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866042  7 -  20541912 TC-AA-A------------GT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665169  7 -   1390856 TC-AA-A------------AT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139962  7 -    198055 TC-AA-A------------AT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99552  7 -    115145 TC-AA-A------------AT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951248  7 -  37912305 CC-AG-A------------AT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6180  7 -     10735 CC-AG-A------------AT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856246  7 - 111700974 CC-AG-A------------AG
i Echinops_telfairi.JH980293.1                           I 1 C 0
s Eidolon_helvum.AWHC01266696.1                               6948  7 +     19438 tc-aa-a------------at
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240427  7 -    607251 TC-AA-A------------AT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226435  7 +  10337057 Tc-ag-a------------at
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31691  7 +    110024 TC-AG-A------------AT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13662  7 +     18970 TC-AG-A------------AT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916808  7 +  41312741 tc-aa-a------------at
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579591  7 +  14770903 tc-aa-a------------at
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042090  7 -   4378816 TC-AA-A------------AT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376028  7 +  39960074 tc-aa-a------------at
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412010  7 -    498745 tc-aa-a------------at
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666732  7 +   7059049 TT-AA-A------------GT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263858  7 +  21539334 TC-AA-A------------AT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71816  4 -    133382 ----A-A------------AT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              403  4 -      1072 ----A-A------------AT
i Eubalaena_japonica.EubJap_flattened_line_257977        n 464 C 0
s Eulemur_albifrons.k141_51491                               15477  7 -     24895 TC-AA-A------------AT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43187  7 -     70999 TC-AA-A------------AT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87157  7 +    112731 TC-AA-A------------AT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43719  7 +     68309 TC-AA-A------------AT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54044  7 -     65740 TC-AA-A------------AT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24676  7 -     75513 TC-AA-A------------AT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48871  7 -     97555 TC-AA-A------------AT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5595  7 +     30972 TC-AA-A------------AT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43315  7 -     52037 TC-AA-A------------AT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59718  7 -    111500 TC-AA-A------------AT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247509  7 - 206538554 TC-AA-A------------AT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117295  7 - 205367284 TC-AA-A------------AT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28393  7 -     30238 TC-AA-A------------AT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922675  7 -   3816255 TC-AG-A------------GT
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126323  7 -    137831 TC-AA-A------------AT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9868  7 +     22493 TC-AA-A------------AT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21938  7 -     32986 TC-AA-A------------AT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1847  7 -     28519 TC-AA-A------------AT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92133  7 -     95226 TC-AA-A------------AT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            35165  7 -     36801 GC-AG-A------------AT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6475  7 -      8343 TT-AA-A------------AC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255490  7 - 186649187 TT-AA-A------------AC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2646  7 -     78134 GC-AG-A------------AT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15406  7 -     40692 TC-AA-A------------AT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36808  7 +     49394 TC-AA-A------------AT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61676  7 -     66874 TC-AA-A------------AT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10550  7 -     42923 TC-AA-A------------AT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17549  7 -     53142 TC-AA-A------------AT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31487  7 -    327341 TC-AA-A------------AT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9807  7 +     48891 TC-AA-A------------AT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933086  7 -  22651954 TC-AG-A------------GT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                 927  7 +      8654 TC-AG-A------------AT
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 502 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8315  7 -     36432 TC-AA-A------------AT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552307  7 -   1711038 TC-AG-C------------AC
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1745  7 -      2730 TC-AG-C------------AT
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143499  7 -    630532 TC-AA-A------------AC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70655  7 +     83186 TG-AA-C------------AT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72547  7 +    143317 TC-AG-A------------AT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6533  7 +     12352 TC-AA-A------------AC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13717  7 +     55766 TC-AA-A------------AC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053317  7 + 191637585 TC-AA-A------------AC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802195  7 +  11177569 TC-AA-A------------AC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7835  7 -    135385 TA-AG-A------------AT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387537 15 +   7955117 ------AGAAACTCTCAGAAT
i Ictidomys_tridecemlineatus.JH393364.1                  I 18 C 0
s Indri_indri.k141_2415743                                    3106  7 +     11955 TC-AA-A------------AT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10711  4 -     16823 ----A-A------------AT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240564  7 +   9596543 TT-Ac-c------------tt
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72551  4 -     97402 ----A-A------------AT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43935  7 +    110728 TC-AA-A------------AT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63572  7 -     65777 TC-AA-A------------AT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760199  7 +  30322482 TC-AA-A------------AT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4838  7 -     13097 TC-AA-A------------AT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4592  7 +      5940 TC-AA-A------------AT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4415  7 -      5717 TC-AA-A------------AT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10807  7 -     11567 TC-AA-A------------AT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12188  7 -     12945 TC-AG-A------------AT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9711  7 +     29618 TC-AA-A------------AT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9707  7 +     31569 TC-AA-A------------AT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9717  7 +     24756 TC-AA-A------------AT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9717  7 +     16388 TC-AA-A------------AT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814190  7 -   3914936 tc-aa-a------------at
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18558  7 +     24238 TC-AA-A------------AT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341896  4 +    662738 ----a-a------------at
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334854  7 -   1826925 TC-AA-A------------AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12021  7 +     19643 TC-AA-A------------AT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045691  7 -   6120653 TC-AA-A------------AT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085594  7 +  43346337 TC-AG-G------------AT
i Loxodonta_africana.GL010049.1                          I 484 C 0
s Lycaon_pictus.CM007581.1                                41615353  7 +  59628241 tc-aa-a------------at
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46243  7 -     61512 TC-AA-A------------AT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373905  7 -  60120075 TC-AA-A------------AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26173  7 +     30207 TC-AA-A------------AT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1011  7 -      5035 TC-AA-A------------AT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26126  7 +     30527 TC-AA-A------------AT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37302  7 -     50087 TC-AA-A------------AT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47046  7 +     51645 TC-AA-A------------AT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416249  7 - 187317192 tc-aa-a------------at
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400479  7 +  25927173 tc-aa-a------------at
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49651  7 -     62418 TC-AA-A------------AT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2182  7 +     14901 TC-AA-A------------AT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46123  7 +     59329 TC-AA-A------------AT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272031  7 +    668171 TC-AA-A------------AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   669  7 -      5049 TC-AA-A------------AT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3829  7 +     17132 TC-AG-A------------AT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223916  7 -    270270 TT-GA-A------------AT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323319  7 +  24302211 TC-AA-A------------AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358150  7 -    752769 TC-AA-A------------AT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674243  7 -    737560 TC-AA-A------------AT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221539  7 +    317179 TC-AA-A------------AT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501754  2 +  40650429 -------------------AT
i Marmota_marmota.CZRN01000018.1                         I 17 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151085  7 +    207569 TC-AG-A------------AT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26907  7 -     74585 TC-AA-C------------AT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50872  7 -    140813 TC-AG-A------------AT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 15
s Mesocricetus_auratus.KB708134.1                         17429938  7 +  29670104 TC-GG-A------------AT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88180  4 +     93471 ----A-A------------AT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10974  7 +     17804 TC-AA-A------------AT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11474  7 -     12984 TC-AA-A------------AT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19790  7 -     26561 TC-AA-A------------AT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985549  7 +  93316391 tc-aa-a------------at
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47481  7 +    145209 CC-AG-C------------AT
i Microgale_talazaci.MicTal_scaffold_6613                I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185772  7 +    200668 TC-AA-A------------AT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963133  7 +  27267610 TC-AG-A------------AT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363927  7 -   8254450 TC-AA-A------------AT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42834  7 -     48117 TC-AA-A------------AT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23353  7 -     27822 TC-AA-A------------AT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9201  7 +     27589 TC-AA-A------------AT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53332  7 -     62432 TC-AA-A------------AT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360285  4 +    437263 ----A-A------------AT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 179999  7 +    366855 TC-AA-A------------AT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26253  7 -     82753 TC-AA-A------------AG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19212  7 -     63510 TC-AA-A------------AT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39894  7 +     47283 TA-AA-A------------AT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593845  7 + 120012414 TC-AG-T------------AT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688234  7 + 129401213 TC-AG-T------------AT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497528  7 + 130317789 TC-AG-T------------AT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84204  7 -     86153 GA-AG-A------------AT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355829  7 +  14710649 tc-aa-a------------at
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63802  7 +     67721 TT-GA-A------------AT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794150  7 +  10118263 tc-aa-a------------at
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388323  7 +   6019432 tc-aa-a------------at
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384110  7 +   4330536 tc-aa-a------------at
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3144  7 +     18357 TC-AA-A------------AT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120501  7 +    130748 TC-AA-A------------AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947425  7 +   3037898 TC-AG-A------------AT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30009  7 +     34575 TC-AA-A------------AT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232951  4 -   7148211 ----a-a------------at
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128955  7 -    149072 TT-AG-A------------AT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54425  7 -    132029 TC-AA-A------------AC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10520  7 -     16345 TC-AA-A------------AC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16405  7 +     22201 TC-AA-A------------AC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414626  7 -  22158432 TC-AA-A------------AC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26803  7 -     54323 TC-AA-A------------AC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198949  7 +   9404916 Tc-aa-a------------at
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638920  7 + 196305487 TC-AA-A------------AT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1523  7 -      9413 TC-AA-A------------AT
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566303  7 - 199412804 TC-AA-A------------AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557613  8 -   3988456 TC-AAAA------------AT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055758  7 -  11899542 tt-ga-a------------at
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452618  7 +   2017862 tc-aa-a------------at
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437023  7 -    630418 TC-AA-A------------AT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15217  7 +    150152 TC-AA-A------------AT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93487  7 -    140218 TC-AG-A------------AT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Orcinus_orca.KB316932.1                                  8103353  4 +  10937097 ----a-a------------at
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                402  7 +     11607 TC-AG-A------------AT
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104349  7 - 174332312 TC-AA-A------------AT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        39994  7 +    559221 tc-aa-a------------at
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41471  7 -     51505 TC-AA-A------------AT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354474  7 +   1103335 TC-CA-A------------AT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404927  7 -  44047080 TC-AA-A------------AT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5446  7 +     17875 TC-AA-A------------AT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473519  7 - 189151597 tt-aa-a------------at
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25216  7 -    230217 TC-AA-A------------AT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462542  7 -  18783137 TC-AA-A------------AT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973201  7 +   8748460 TC-AA-A------------AT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616455  7 +   2937107 TC-AA-A------------AT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244151  7 - 183742232 tc-aa-a------------at
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10613  7 +     21308 TC-AA-A------------AT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293186  7 -  20919399 TC-AA-A------------AT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23261  7 -     27687 TC-AA-A------------AT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16407  7 +     16796 TC-AA-A------------AT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23218  7 -     23640 TC-AA-A------------AT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15792  7 +     78924 TT-AA-A------------AT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27801  7 +     31479 TA-AA-A------------AT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20169  7 -     24908 TA-AA-A------------AT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2594  7 +      9367 TC-AG-A------------AT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32652  7 -     56120 TC-AG-A------------AT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4879  4 -     63832 ----A-A------------AT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3440  7 +     55023 TC-AA-A------------AT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2978  7 -     89929 TC-AA-A------------AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3568  7 +     40849 TC-AA-A------------AT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255243  7 +  14605196 tc-aa-a------------at
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4740  7 +     22231 CC-AA-A------------AT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65558  7 +    207309 TC-AA-A------------AT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6650  7 -     25401 TC-AA-A------------AT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32394  7 +     58159 TC-AA-A------------AT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32670  7 +     63561 TC-AA-A------------AT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32430  7 +     51148 TC-AA-A------------AT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557400  7 -   4542175 TC-AA-A------------AT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32414  7 +     51125 TC-AA-A------------AT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1896  4 +     19503 ----A-A------------AT
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8832  7 +     39866 TC-AA-A------------AT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3914  7 -      9282 TC-AA-A------------AT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43318  7 -     87950 TC-AA-A------------AT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43712  7 -     88961 TC-AA-A------------AT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8410  7 -     39403 TC-AA-A------------AT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43361  7 +     87928 TC-AA-A------------AT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8409  7 -     60166 TC-AA-A------------AT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15346  7 -     67232 TC-AA-A------------AT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43262  7 -     90634 TC-AA-A------------AT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44729  7 +     89403 TC-AA-A------------AT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178629  7 - 189387572 TC-AA-A------------AC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193446  7 -   9816681 TC-AA-A------------AC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28589  7 +     69807 TC-AA-A------------AT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45770  7 -     80239 TC-AA-A------------AT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 4917  7 +      7663 TC-AG-A------------AT
i Procavia_capensis.ProCapCap_scaffold_165387            I 502 C 0
s Prolemur_simus.MPIZ01000396.1                            1983347  7 +   4620579 tc-aa-a------------at
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566857  7 -   2598838 TC-AA-A------------AT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4495  7 -      7103 TC-AA-A------------AT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5092  7 -     11706 TC-AA-A------------AT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8830  7 -     30655 TC-AA-A------------AT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35143  7 +     46564 TC-AA-A------------AT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95422  7 -     98465 TC-AA-A------------AT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9061  7 +     35169 TC-AA-A------------AT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38173  7 +     52041 TC-AG-A------------AT
i Psammomys_obesus.NESX01036366.1                        C 0 I 213
s Pteronotus_parnellii.KE847780.1                            52892  7 -     66298 TC-AA-A------------AT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5403  7 -     18639 TC-AA-A------------AT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841488  7 -  28871421 tc-aa-a------------at
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538003  7 -   4952924 tc-aa-a------------at
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099858  7 +  38429054 TC-AA-A------------AT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27958  7 +     91421 TC-AA-A------------AT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154442  7 -   7812017 TC-AA-A------------AT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8815  7 +     72585 TC-AA-A------------AT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53940  7 +     55069 TC-AA-A------------AT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023669  7 -  90668790 TC-AG-A------------AT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915469  7 +   3329780 TC-AG-A------------AT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2543  7 +      7119 TC-AA-A------------AT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123159  7 + 195417433 tc-aa-a------------at
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237385  7 -   7961872 TC-AA-A------------AT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75987  7 -    116970 TC-AA-A------------AT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4714  7 +     27962 TC-AA-A------------AT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4608  7 +      6077 TC-AA-A------------AT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4698  7 +      5971 TC-AA-A------------AT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4619  7 +      5932 TC-AA-A------------AT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2961  7 -      4390 TC-AA-A------------AT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392398  7 - 209938924 TC-AA-A------------AT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4567  7 +      5979 CC-AA-A------------AT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1137  7 -     22275 TC-AA-A------------AT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8615  7 +     16473 TC-AA-A------------AT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109734  7 + 121099817 tc-aa-a------------at
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31301  7 -     47369 TC-AA-A------------AT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31687  7 -     79414 TC-AA-A------------AT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28378  7 -     34454 TC-AA-A------------AT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15779  7 -     22428 TC-AA-A------------AT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30933  7 -     47109 TC-AA-A------------AT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238979  7 +   5703754 TC-AA-A------------AT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8569  7 +     21866 TC-AA-A------------AT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116631  7 +    313613 TC-AA-A------------AT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26284  7 +     27374 TC-AA-A------------AT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29796  7 +     58920 TC-AA-A------------AT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16294  7 -     45317 TC-AA-A------------AT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23952  7 -     42441 TC-AA-A------------AT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26630  7 -     29113 TC-AA-A------------AT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29705  7 -     48123 TC-AA-A------------AT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864903  7 -   1910179 TC-AA-A------------AT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672007 13 +  18376816 TC-Ag-a------gtaaaaat
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869123  7 +   3870691 TC-AG-A------------AT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7490  7 -     97271 TC-AA-A------------AT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125628  7 +    196729 TC-AA-A------------AT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644517  7 +  69701581 TT-AA-G------------AT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391885  7 +   1523678 TC-AA-A------------AC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15063  7 +     22964 TC-AA-A------------AT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3492  7 +      5583 TC-AA-A------------AT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192370  7 +    199430 TC-AG-A------------AT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106338  7 -    539355 TC-AG-A------------AT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1403  7 +      9917 TC-AA-A------------AT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8201  7 +     20590 TC-AA-A------------AT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354137  7 - 186847797 tc-aa-a------------at
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24826  7 -     33621 TT-AG-A------------AT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20480  6 -     31044 -C-GA-G------------GT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480890  7 -    610378 TC-AA-A------------AT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21829  7 +     26378 TC-AA-A------------AT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34505  7 -     78344 TC-AA-A------------AT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21154  7 +     25722 TC-AA-A------------AT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29461  7 -     62838 TC-AA-A------------AT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29505  7 +     46913 TC-AA-A------------AT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10314  7 -     28527 TC-AA-A------------AT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31396  7 -     64340 TC-AA-A------------AT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29434  7 -     63452 TC-AA-A------------AT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10881  7 +     22490 TC-AA-A------------AT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4304  7 -      6147 TC-AA-A------------AT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11217  7 -     13050 TC-AA-A------------AT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256447  7 -   6242583 TC-AA-A------------AT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2475  7 +     19340 TC-AA-A------------AT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174224  7 -    200418 TT-AA-A------------AT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482313  7 -  10818551 tg-ag-a------------aa
i Trichechus_manatus.JH594705.1                          I 461 C 0
s Tupaia_chinensis.KB320699.1                              1835127  7 -   4065304 TC-CA-A------------AT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9147  7 -     70247 TC-CA-A------------AT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366466  4 -  33153633 ----a-a------------at
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4355  7 -     21056 TT-GA-A------------AT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182793  7 +   5085361 tc-aa-a------------at
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26003  7 -     30710 TC-AA-A------------GT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24910  7 -    147434 TC-AA-A------------GT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77050  7 +   5488506 tc-aa-a------------at
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105715  7 -    112863 TC-AA-A------------AC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29826  7 -     86975 TC-AA-A------------AT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       747  7 -      1899 TC-AG-A------------TT
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1750  4 +      2126 ----A-A------------AT
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Xerus_inauris.XerIna_scaffold_2302                        174902  2 -    224448 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922  6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549  6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339  6 -     41509 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6182 1 +     36723 G
s Acinonyx_jubatus.LLWD01001279.1                           813607 1 +   1699592 G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25985 1 +     63021 G
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 135 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416064 1 +  29979442 g
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216409 1 +    347723 g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18792 1 -     61208 G
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 180
s Allenopithecus_nigroviridis.k141_3755588                   48827 1 +     53615 A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           858 1 +     13857 A
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17409 1 -     21945 A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19094 1 +     32033 A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72928 1 -     84148 G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45167 1 -     78289 G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44606 1 +     55831 G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43056 1 -     64179 G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            159 1 -      3959 g
i Alouatta_macconnelli.k141_1277969                      I 7 C 0
s Alouatta_nigerrima.k141_376068                             41681 1 +     45454 G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47330 1 +     70886 G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9503 1 +     30854 G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33637 1 +     42133 G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586067 1 +   2318259 t
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177860 1 -    412891 G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51174 1 -     68529 G
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1894 1 +     17741 G
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2519 1 -     15923 G
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672801 1 +   5030052 g
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2795 1 -     16391 G
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2354 1 -     17186 G
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16870 1 -     32367 G
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20961 1 -     45910 T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6126 1 -     15198 G
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 2
s Ateles_geoffroyi_b.tarseq_1536                               275391 1 +  21539123 G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11559 1 +     48076 G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6694 1 -     28759 G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34248 1 +     44353 G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49619 1 -     71267 G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23677 1 -     33135 G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6969 1 +     11645 G
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6977 1 -     19611 G
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964206 1 -  23207421 g
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          706 1 -     25979 g
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87075 1 +    124022 G
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22617 1 +    288883 G
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357007 1 +  48749331 G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755571 1 +   1948126 G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545713 1 -  45695690 G
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530728 1 -   4408762 G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8567 1 +     28062 G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43861 1 -     91139 G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21387 1 +     95584 G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21300 1 +    119600 G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10874 1 +     18648 G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10408 1 -     13885 G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2479 1 -      8861 G
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454871 1 + 189096842 G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2394 1 +      8664 G
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631725 1 +  17673402 g
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666012 1 +   7040546 G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209671 1 +   1652518 g
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506091 1 +  60362399 G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9727 1 -     23171 G
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223070 1 +   9314153 g
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616205 1 +  59632846 g
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107786 1 -  63665305 g
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409796 1 -  46296322 G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592070 1 +  44709034 G
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    239 1 -      1607 G
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271178 1 +    496798 g
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                982 1 +      9923 G
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28379 1 -     39886 G
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80267 1 -    217609 G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997109 1 +  23392119 a
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000550 1 +  23407841 a
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63631 1 -     66877 A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5792 1 -     12580 G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43849 1 +     53515 G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373612 1 -  26074798 G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8666 1 -     34880 G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67762 1 -     89041 G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3138 1 -      5494 G
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492892 1 -  27778364 g
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19725 1 +     27315 G
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141976 1 -   4669795 a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45720 1 +     47900 A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1148 1 -     14410 A
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45532 1 -    148725 A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27741 1 -     40656 A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7705 1 +     20796 A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12823 1 -     17524 A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28546 1 -     34525 A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12326 1 -     25376 A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364913 1 -  39242232 A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270640 1 +  21565898 A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33008 1 -     45857 A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27909 1 -     32606 A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4071 1 +      8499 A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26467 1 +     70610 A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23428 1 +     36323 A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13407 1 -     19938 G
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31343 1 -     33796 G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5857 1 -     15404 G
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9674 1 -     32913 G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20087 1 -     40346 G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20342 1 +    216457 G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20135 1 +     39636 G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239477 1 -   2543920 G
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4723 1 +      5346 G
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43198 1 -    112038 G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8749 1 +     34062 G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344329 1 +  18827391 A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10873 1 -     44032 A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305654 1 - 135778131 a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15539 1 +     15858 G
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607114 1 -    839153 G
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2227 1 +      2406 G
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             410059 1 -   2368649 a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379940 1 - 200372422 A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3497 1 -     84244 A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807962 1 +  53390261 g
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3493 1 -      8242 G
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44887 1 -     83289 G
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115564 1 - 224834208 A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10078 1 +     12657 G
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5052 1 +     87169 G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646118 1 -   1526836 A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19026 1 +     50838 G
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5034 1 +     36344 G
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28811 1 +     75252 G
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110759 1 -   2246927 G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293279 1 +  12879189 G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632614 1 -  35494412 g
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866049 1 -  20541912 G
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665176 1 -   1390856 G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139969 1 -    198055 G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99559 1 -    115145 G
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951255 1 -  37912305 G
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6187 1 -     10735 G
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856253 1 - 111700974 G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6955 1 +     19438 g
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240434 1 -    607251 G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226442 1 +  10337057 g
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31698 1 +    110024 G
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13669 1 +     18970 G
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916815 1 +  41312741 g
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579598 1 +  14770903 g
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042097 1 -   4378816 G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376035 1 +  39960074 t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412017 1 -    498745 t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666739 1 +   7059049 G
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263865 1 +  21539334 A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71820 1 -    133382 G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              407 1 -      1072 G
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15484 1 -     24895 G
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43194 1 -     70999 G
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87164 1 +    112731 G
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43726 1 +     68309 G
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54051 1 -     65740 G
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24683 1 -     75513 G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48878 1 -     97555 G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5602 1 +     30972 G
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43322 1 -     52037 G
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59725 1 -    111500 G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247516 1 - 206538554 G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117302 1 - 205367284 G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28400 1 -     30238 G
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922682 1 -   3816255 G
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126330 1 -    137831 T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9875 1 +     22493 T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21945 1 -     32986 T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1854 1 -     28519 G
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92140 1 -     95226 G
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            35172 1 -     36801 G
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6482 1 -      8343 G
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255497 1 - 186649187 G
i Gorilla_gorilla.LT578341.1                             C 0 I 5
s Graphiurus_murinus.GraMur_scaffold_10447                    2653 1 -     78134 G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15413 1 -     40692 G
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36815 1 +     49394 G
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61683 1 -     66874 G
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10557 1 -     42923 G
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17556 1 -     53142 G
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31494 1 -    327341 G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9814 1 +     48891 G
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933093 1 -  22651954 G
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                 934 1 +      8654 G
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8322 1 -     36432 G
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552314 1 -   1711038 G
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1752 1 -      2730 G
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143506 1 -    630532 G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70662 1 +     83186 G
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72554 1 +    143317 G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6540 1 +     12352 G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13724 1 +     55766 G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053324 1 + 191637585 G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802202 1 +  11177569 G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7842 1 -    135385 G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387552 1 +   7955117 G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3113 1 +     11955 G
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10715 1 -     16823 G
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240571 1 +   9596543 g
i Jaculus_jaculus.JH725527.1                             C 0 I 118
s Kogia_breviceps.KogBre_flattened_line_3970                 72555 1 -     97402 G
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43942 1 +    110728 G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63579 1 -     65777 G
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760206 1 +  30322482 G
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4845 1 -     13097 G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4599 1 +      5940 G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4422 1 -      5717 G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10814 1 -     11567 G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12195 1 -     12945 G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9718 1 +     29618 G
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9714 1 +     31569 G
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9724 1 +     24756 G
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9724 1 +     16388 G
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814197 1 -   3914936 g
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18565 1 +     24238 G
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341900 1 +    662738 g
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334861 1 -   1826925 A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12028 1 +     19643 T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045698 1 -   6120653 T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085601 1 +  43346337 G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615360 1 +  59628241 g
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46250 1 -     61512 A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373912 1 -  60120075 A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26180 1 +     30207 A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1018 1 -      5035 A
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26133 1 +     30527 A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37309 1 -     50087 A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47053 1 +     51645 A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416256 1 - 187317192 a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400486 1 +  25927173 a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49658 1 -     62418 A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2189 1 +     14901 A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46130 1 +     59329 A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272038 1 +    668171 A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   676 1 -      5049 A
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3836 1 +     17132 A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223923 1 -    270270 G
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323326 1 +  24302211 A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358157 1 -    752769 A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674250 1 -    737560 G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221546 1 +    317179 G
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501756 1 +  40650429 G
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151092 1 +    207569 G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26914 1 -     74585 G
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429945 1 +  29670104 A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88184 1 +     93471 G
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10981 1 +     17804 G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11481 1 -     12984 G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19797 1 -     26561 G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985556 1 +  93316391 g
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47488 1 +    145209 G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185779 1 +    200668 G
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963140 1 +  27267610 G
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363934 1 -   8254450 G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42841 1 -     48117 G
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23360 1 -     27822 A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9208 1 +     27589 G
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53339 1 -     62432 G
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360289 1 +    437263 G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180006 1 +    366855 G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 2
s Moschus_moschiferus.MosMos_scaffold_13123                  26260 1 -     82753 G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19219 1 -     63510 G
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39901 1 +     47283 G
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593852 1 + 120012414 G
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688241 1 + 129401213 G
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497535 1 + 130317789 G
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84211 1 -     86153 G
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355836 1 +  14710649 g
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63809 1 +     67721 G
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794157 1 +  10118263 g
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388330 1 +   6019432 g
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384117 1 +   4330536 g
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3151 1 +     18357 G
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120508 1 +    130748 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947432 1 +   3037898 G
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30016 1 +     34575 A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232955 1 -   7148211 g
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128962 1 -    149072 A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 2
s Nomascus_annamensis.k141_1771965                           54432 1 -    132029 G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10527 1 -     16345 G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16412 1 +     22201 G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414633 1 -  22158432 G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26810 1 -     54323 G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198956 1 +   9404916 g
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638927 1 + 196305487 T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1530 1 -      9413 T
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566310 1 - 199412804 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557621 1 -   3988456 G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055765 1 -  11899542 g
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452625 1 +   2017862 g
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437030 1 -    630418 G
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15224 1 +    150152 G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93494 1 -    140218 G
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Orcinus_orca.KB316932.1                                  8103357 1 +  10937097 t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                409 1 +     11607 G
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104356 1 - 174332312 G
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40001 1 +    559221 g
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41478 1 -     51505 T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354481 1 +   1103335 T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404934 1 -  44047080 G
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5453 1 +     17875 G
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473526 1 - 189151597 g
i Pan_troglodytes.CM009242.2                             C 0 I 19
s Panthera_onca.PanOnc_flattened_line_3271                   25223 1 -    230217 G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462549 1 -  18783137 G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973208 1 +   8748460 G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616462 1 +   2937107 G
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244158 1 - 183742232 a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10620 1 +     21308 A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293193 1 -  20919399 A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23268 1 -     27687 A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16414 1 +     16796 A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23225 1 -     23640 A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15799 1 +     78924 G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27808 1 +     31479 T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20176 1 -     24908 T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2601 1 +      9367 G
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32659 1 -     56120 A
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4883 1 -     63832 G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3447 1 +     55023 A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2985 1 -     89929 A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3575 1 +     40849 A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255250 1 +  14605196 a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4747 1 +     22231 G
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65565 1 +    207309 G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6657 1 -     25401 G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32401 1 +     58159 G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32677 1 +     63561 G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32437 1 +     51148 G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557407 1 -   4542175 G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32421 1 +     51125 G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1900 1 +     19503 G
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8839 1 +     39866 G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3921 1 -      9282 G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43325 1 -     87950 G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43719 1 -     88961 G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8417 1 -     39403 G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43368 1 +     87928 G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8416 1 -     60166 G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15353 1 -     67232 G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43269 1 -     90634 G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44736 1 +     89403 G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178636 1 - 189387572 G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193453 1 -   9816681 G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28596 1 +     69807 A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45777 1 -     80239 A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 4924 1 +      7663 G
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983354 1 +   4620579 g
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566864 1 -   2598838 G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4502 1 -      7103 G
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5099 1 -     11706 G
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8837 1 -     30655 G
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35150 1 +     46564 G
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95429 1 -     98465 G
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9068 1 +     35169 G
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38393 1 +     52041 G
i Psammomys_obesus.NESX01036366.1                        I 213 C 0
s Pteronotus_parnellii.KE847780.1                            52899 1 -     66298 G
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5410 1 -     18639 G
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841495 1 -  28871421 g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538010 1 -   4952924 g
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099865 1 +  38429054 G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27965 1 +     91421 A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154449 1 -   7812017 A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8822 1 +     72585 A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53947 1 +     55069 G
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023676 1 -  90668790 G
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915476 1 +   3329780 G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2550 1 +      7119 A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123166 1 + 195417433 a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237392 1 -   7961872 A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75994 1 -    116970 G
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4721 1 +     27962 G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4615 1 +      6077 G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4705 1 +      5971 G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4626 1 +      5932 G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2968 1 -      4390 G
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392405 1 - 209938924 G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4574 1 +      5979 G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1144 1 -     22275 G
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8622 1 +     16473 G
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109741 1 + 121099817 g
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31308 1 -     47369 G
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31694 1 -     79414 G
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28385 1 -     34454 G
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15786 1 -     22428 G
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30940 1 -     47109 G
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238986 1 +   5703754 G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8576 1 +     21866 G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116638 1 +    313613 G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26291 1 +     27374 A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29803 1 +     58920 A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16301 1 -     45317 A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23959 1 -     42441 A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26637 1 -     29113 A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29712 1 -     48123 A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864910 1 -   1910179 G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672020 1 +  18376816 g
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869130 1 +   3870691 G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7497 1 -     97271 G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125635 1 +    196729 G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644524 1 +  69701581 G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391892 1 +   1523678 G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15070 1 +     22964 C
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3499 1 +      5583 G
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192377 1 +    199430 G
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106345 1 -    539355 G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1410 1 +      9917 G
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8208 1 +     20590 G
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354144 1 - 186847797 a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24833 1 -     33621 G
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20486 1 -     31044 G
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480897 1 -    610378 G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21836 1 +     26378 A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34512 1 -     78344 A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21161 1 +     25722 A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29468 1 -     62838 A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29512 1 +     46913 A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10321 1 -     28527 A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31403 1 -     64340 A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29441 1 -     63452 A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10888 1 +     22490 A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4311 1 -      6147 A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11224 1 -     13050 A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256454 1 -   6242583 A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2482 1 +     19340 A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174231 1 -    200418 G
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482320 1 -  10818551 a
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835134 1 -   4065304 G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9154 1 -     70247 G
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366470 1 -  33153633 g
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4362 1 -     21056 G
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182800 1 +   5085361 g
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26010 1 -     30710 G
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24917 1 -    147434 G
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77057 1 +   5488506 g
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105722 1 -    112863 G
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29833 1 -     86975 G
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       754 1 -      1899 G
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1754 1 +      2126 G
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Xerus_inauris.XerIna_scaffold_2302                        174902 2 -    224448 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922 6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549 6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339 6 -     41509 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 50879 15 -    140813 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6183 5 +     36723 AT-A----TT
s Acinonyx_jubatus.LLWD01001279.1                           813608 5 +   1699592 AC-A----TT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     25986 5 +     63021 GC-A----TG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416065 5 +  29979442 ac-a----tt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216410 5 +    347723 ac-a----tt
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18973 5 -     61208 GA-A----TT
i Allactaga_bullata.AllBul_scaffold_20030                I 180 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48828 5 +     53615 AC-A----TT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           859 5 +     13857 AC-A----TT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17410 5 -     21945 AC-A----TT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19095 5 +     32033 AC-A----TT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72929 5 -     84148 AT-A----TT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45168 5 -     78289 AT-A----TT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44607 5 +     55831 AT-A----TT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43057 5 -     64179 AT-A----TT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            160 9 -      3959 at-gcaaatt
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             41682 5 +     45454 AT-A----TT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47331 5 +     70886 AT-A----TT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9504 5 +     30854 AT-A----TT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33638 5 +     42133 AT-A----TT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586068 5 +   2318259 tc-a----gt
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177861 2 -    412891 AC--------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_21030             51175 5 -     68529 AC-A----GT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1895 5 +     17741 AC-A----TT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2520 5 -     15923 AC-A----TT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672802 5 +   5030052 ac-a----tt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2796 5 -     16391 AC-A----TT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2355 5 -     17186 AC-A----TT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16871 5 -     32367 AC-A----TG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20962 5 -     45910 CT-A----TT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6129 1 -     15198 ---------T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 2 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275392 5 +  21539123 AT-G----TT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11560 5 +     48076 AT-G----TT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6695 5 -     28759 AT-G----TT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34249 5 +     44353 AT-G----TT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49620 5 -     71267 AT-G----TT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23678 5 -     33135 AT-G----TT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6970 5 +     11645 AC-A----TT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6978 5 -     19611 AC-A----TT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964207 5 -  23207421 ac-a----tt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          707 5 -     25979 ac-a----tt
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87076 5 +    124022 AC-A----GT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22618 5 +    288883 AC-A----GT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357008 5 +  48749331 AC-A----GT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755572 5 +   1948126 AC-A----GT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545714 5 -  45695690 AC-A----GT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530729 5 -   4408762 AC-A----GT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8568 5 +     28062 AC-A----TT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43862 5 -     91139 AC-A----TT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21388 5 +     95584 AC-A----TT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21301 5 +    119600 AC-A----TT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10875 5 +     18648 AC-A----TT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10409 5 -     13885 AC-A----TT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2480 5 -      8861 AC-A----TT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454872 5 + 189096842 AC-A----TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2395 5 +      8664 AC-A----TT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631726 5 +  17673402 ac-a----tt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666013 5 +   7040546 AC-A----TT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209672 5 +   1652518 ac-a----tt
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506092 5 +  60362399 AC-A----GT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9728 5 -     23171 AC-A----GT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223071 5 +   9314153 ac-a----gt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616206 5 +  59632846 ac-a----gt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107787 5 -  63665305 ac-a----gt
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409797 5 -  46296322 AC-A----GT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592071 5 +  44709034 AC-A----GT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    240 4 -      1607 AA-A-----T
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271179 5 +    496798 ac-a----tt
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                983 2 +      9923 AC--------
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 1
s Castor_canadensis.CasCan_scaffold_39952                    28380 5 -     39886 AT-A----TT
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 3
s Catagonus_wagneri.CatWag_scaffold_2839                     80268 5 -    217609 AC-A----TT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997110 5 +  23392119 aa-a----tt
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000551 5 +  23407841 aa-a----tt
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63632 5 -     66877 AA-A----TT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5793 5 -     12580 AC-A----TT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43850 5 +     53515 AC-A----TT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373613 5 -  26074798 AC-A----TT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8667 5 -     34880 AC-A----TT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67763 5 -     89041 AC-A----TT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3139 5 -      5494 AC-A----TT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492893 5 -  27778364 ac-a----tt
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19726 5 +     27315 AC-A----TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                141977 5 -   4669795 ac-a----tt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45721 5 +     47900 AC-A----TT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1149 5 -     14410 AC-A----TT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45533 5 -    148725 AC-A----TT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27742 5 -     40656 AC-A----TT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7706 5 +     20796 AC-A----TT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12824 5 -     17524 AC-A----TT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28547 5 -     34525 AC-A----TT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12327 5 -     25376 AC-A----TT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364914 5 -  39242232 AC-A----TT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270641 5 +  21565898 AC-A----TT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33009 5 -     45857 AC-A----TT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27910 5 -     32606 AC-A----TT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4072 5 +      8499 AC-A----TT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26468 5 +     70610 AC-A----TT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23429 5 +     36323 AC-A----TT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13408 4 -     19938 AC-A----C-
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31344 5 -     33796 AC-A----TT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5858 5 -     15404 AC-A----TT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9675 5 -     32913 AC-A----TT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20088 5 -     40346 AC-A----TT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20343 5 +    216457 AC-A----TT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20136 5 +     39636 AC-A----TT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239478 5 -   2543920 AA-A----AT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4724 5 +      5346 AC-A----TT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43199 5 -    112038 AC-A----TT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8750 5 +     34062 AC-A----TT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344330 5 +  18827391 AC-A----TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10874 5 -     44032 AC-A----TT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305655 5 - 135778131 ac-a----tt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15540 4 +     15858 AC-A----C-
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607115 4 -    839153 AC-A----C-
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2228 5 +      2406 AC-A----TT
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 I 3
s Colobus_angolensis.KN981557.1                             410060 5 -   2368649 ac-a----tt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379941 5 - 200372422 AC-A----TT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3498 5 -     84244 AC-A----TT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807963 5 +  53390261 ac-a----tt
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3494 5 -      8242 AC-A----TT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_14425                 44888 5 -     83289 GC-A----TG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 1
s Cricetulus_griseus.LT883664.1                          213115565 4 - 224834208 -C-A----TG
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_77846              10079 5 +     12657 AG-A----TT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5053 5 +     87169 GC-A----TT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646119 5 -   1526836 AT-A----TT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19027 4 +     50838 AA-A-----T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5035 5 +     36344 AA-T----TT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28812 5 +     75252 AA-A----TT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110760 4 -   2246927 AG-A----C-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293280 5 +  12879189 AC-A----TT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632615 5 -  35494412 ac-a----tt
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866050 2 -  20541912 AC--------
i Desmodus_rotundus.KZ672289.1                           C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665177 5 -   1390856 AC-A----TT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139970 5 -    198055 AC-A----TT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99560 5 -    115145 AA-A----AT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951256 5 -  37912305 AC-A----TT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6188 5 -     10735 AC-A----TT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856254 5 - 111700974 AC-A----TT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6956 5 +     19438 at-a----tt
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240435 5 -    607251 AC-G----GT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226443 5 +  10337057 ac-a----tt
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31699 5 +    110024 AC-A----TG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01026522.1                           13670 5 +     18970 AC-A----TG
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               24916816 5 +  41312741 ac-a----tt
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579599 5 +  14770903 ac-a----tt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042098 5 -   4378816 AC-A----TT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376036 5 +  39960074 ac-a----tt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412018 5 -    498745 ac-a----tt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666740 5 +   7059049 AC-A----TT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263866 5 +  21539334 AC-A----TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71821 5 -    133382 AC-A----TT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              408 5 -      1072 AC-A----TT
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15485 5 -     24895 AC-A----TT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43195 5 -     70999 AC-A----TT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87165 5 +    112731 AC-A----TT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43727 5 +     68309 AC-A----TT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54052 5 -     65740 AC-A----TT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24684 5 -     75513 AC-A----TT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48879 5 -     97555 AC-A----TT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5603 5 +     30972 AC-A----TT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43323 5 -     52037 AC-A----TT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59726 5 -    111500 AC-A----TT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247517 5 - 206538554 AC-A----TT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117303 5 - 205367284 AC-A----TT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28401 5 -     30238 AC-A----TT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922683 5 -   3816255 AA-A----TT
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126331 5 -    137831 CC-A----TT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9876 5 +     22493 CC-A----TT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21946 5 -     32986 CC-A----TT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1855 5 -     28519 AT-A----TT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92141 5 -     95226 AC-A----GT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_33859                            35173 5 -     36801 AC-A----TT
i Glis_glis.GliGli_scaffold_33859                        C 0 C 0
s Gorilla_beringei.k141_3358147                               6483 5 -      8343 AC-A----TT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 71976 5 +  33314783 AC-A----TT
i Gorilla_gorilla.LT578336.1                             I 81 I 29
s Graphiurus_murinus.GraMur_scaffold_10447                    2654 5 -     78134 AC-A----TT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15414 5 -     40692 AC-A----TT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36816 5 +     49394 AC-A----TT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61684 5 -     66874 AC-A----TT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10558 5 -     42923 AC-A----TT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17557 5 -     53142 AC-A----TT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31495 5 -    327341 AC-A----TT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9815 5 +     48891 AC-A----GT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933094 5 -  22651954 AA-A----TT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                 935 5 +      8654 GT-G----CT
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8323 5 -     36432 AC-A----TT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552315 5 -   1711038 AC-A----GT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1753 5 -      2730 AC-G----GT
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143507 5 -    630532 AC-A----TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70663 5 +     83186 AC-A----TT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72555 5 +    143317 AA-A----TT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6541 5 +     12352 AC-A----TT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13725 5 +     55766 AC-A----TT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053325 5 + 191637585 AC-A----TT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802203 5 +  11177569 AC-A----TT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7843 5 -    135385 AA-A----AT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387553 5 +   7955117 AC-A----TT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3114 5 +     11955 AC-A----TT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10716 5 -     16823 AC-A----TT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240690 5 +   9596543 ga-a----tt
i Jaculus_jaculus.JH725527.1                             I 118 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72556 5 -     97402 AC-A----TT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43943 5 +    110728 AT-G----TT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63580 5 -     65777 GC-A----TT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760207 5 +  30322482 AC-A----TT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4846 5 -     13097 AC-A----TT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4600 5 +      5940 AC-A----TT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4423 5 -      5717 AC-A----TT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10815 5 -     11567 AC-A----TT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12196 5 -     12945 AC-A----TT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9719 5 +     29618 GC-A----TT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9715 5 +     31569 GC-A----TT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9725 5 +     24756 GC-A----TT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9725 5 +     16388 GC-A----TT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814198 5 -   3914936 ac-a----tt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18566 4 +     24238 AC-A----T-
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341901 5 +    662738 ac-a----tt
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334862 5 -   1826925 AC-A----TT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12029 5 +     19643 CT-A----TT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045699 5 -   6120653 CT-A----TT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085602 5 +  43346337 AC-A----TT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615361 5 +  59628241 ac-a----gt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46251 5 -     61512 AC-A----TT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373913 5 -  60120075 AC-A----TT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26181 5 +     30207 AC-A----TT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1019 5 -      5035 AC-A----TT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26134 5 +     30527 AC-A----TT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37310 5 -     50087 AC-A----TT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47054 5 +     51645 AC-A----TT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416257 5 - 187317192 ac-a----tt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400487 5 +  25927173 ac-a----tt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49659 5 -     62418 AC-A----TT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2190 5 +     14901 AC-A----TT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46131 5 +     59329 AC-A----TT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272039 5 +    668171 AC-A----TT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   677 5 -      5049 AC-A----TT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3837 5 +     17132 AC-A----TT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223924 5 -    270270 AT-A----TT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323327 5 +  24302211 AC-A----TT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358158 5 -    752769 AC-A----TT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674251 5 -    737560 AC-A----GT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221547 5 +    317179 AC-A----GT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501757 5 +  40650429 AC-A----TT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151093 5 +    207569 AC-A----TT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26915 5 -     74585 AC-A----TT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429946 5 +  29670104 CC-A----TG
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_6114                     88185 5 +     93471 AC-A----TT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                10982 5 +     17804 AC-A----TT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11482 5 -     12984 AC-A----TT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19798 5 -     26561 AC-A----TT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985557 5 +  93316391 ac-a----tt
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47489 5 +    145209 AC-C----TC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185780 2 +    200668 AC--------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 1
s Microtus_ochrogaster.CM001695.1                         15963141 5 +  27267610 AC-A----TG
i Microtus_ochrogaster.CM001695.1                        C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    6363935 5 -   8254450 AC-A----TT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42842 5 -     48117 AC-A----TT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23361 5 -     27822 AC-A----TT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9209 5 +     27589 AC-A----TT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53340 5 -     62432 AC-A----TT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360290 5 +    437263 AC-A----TT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180009 1 +    366855 ---------T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26261 5 -     82753 AC-G----GT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19220 5 -     63510 AC-A----TT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39902 5 +     47283 AC-A----TT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593853 5 + 120012414 GC-A----TG
i Mus_caroli.LT608237.1                                  C 0 I 1
s Mus_musculus.chr8                                       41688242 5 + 129401213 GC-A----TG
i Mus_musculus.chr8                                      C 0 I 1
s Mus_spretus.CM004101.1                                  39497536 5 + 130317789 GC-A----TG
i Mus_spretus.CM004101.1                                 C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_12866             84212 5 -     86153 AC-A----TT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355837 5 +  14710649 ac-a----tt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63810 4 +     67721 AA-A-----T
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794158 5 +  10118263 ac-a----tt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388331 5 +   6019432 ac-a----tt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384118 5 +   4330536 ac-a----tt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3152 5 +     18357 AC-A----TT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120509 4 +    130748 AC-A----T-
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947433 5 +   3037898 AC-A----TA
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30017 5 +     34575 AC-G----TT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232956 5 -   7148211 ac-a----tt
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128965 1 -    149072 ---------T
i Noctilio_leporinus.NocLep_scaffold_7894                I 2 C 0
s Nomascus_annamensis.k141_1771965                           54433 5 -    132029 AC-A----TT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10528 5 -     16345 AC-A----TT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16413 5 +     22201 AC-A----TT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414634 5 -  22158432 AC-A----TT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26811 5 -     54323 AC-A----TT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198957 5 +   9404916 ac-a----gt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638928 5 + 196305487 CT-A----TT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1531 5 -      9413 CT-A----TT
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566311 5 - 199412804 CT-A----TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557622 5 -   3988456 AT-G----GT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055766 4 -  11899542 aa-a-----t
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452626 5 +   2017862 ac-a----tt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437031 5 -    630418 AC-G----GT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15225 5 +    150152 AC-A----GT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93495 5 -    140218 AC-A----TG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 1
s Orcinus_orca.KB316932.1                                  8103358 5 +  10937097 tt-t----tt
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                410 5 +     11607 AC-A----TT
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104357 4 - 174332312 AC-A----T-
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 5
s Otocyon_megalotis.JAEUCK010005147.1                        40002 5 +    559221 ac-a----gt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41479 5 -     51505 CC-A----TT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354482 5 +   1103335 CC-A----TT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404935 5 -  44047080 AC-A----GT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5454 5 +     17875 AC-A----GT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             13178 6 -     26668 ACGA----TT
i Pan_troglodytes.NBAG03003091.1                         I 103 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25224 5 -    230217 AC-A----TT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462550 5 -  18783137 AC-A----TT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973209 5 +   8748460 AC-A----TT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616463 5 +   2937107 AC-A----GT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244159 5 - 183742232 ac-a----tt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10621 5 +     21308 AC-A----TT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293194 5 -  20919399 AC-A----TT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23269 5 -     27687 AC-A----TT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16415 5 +     16796 AC-A----TT
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23226 5 -     23640 AC-A----TT
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15800 5 +     78924 AC-A----TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27809 5 +     31479 CT-A----TT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20177 5 -     24908 CT-A----TT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2602 5 +      9367 AC-A----TT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32660 5 -     56120 AA-A----TT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4884 5 -     63832 AC-A----TT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3448 5 +     55023 AC-A----TT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2986 5 -     89929 AC-A----TT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3576 5 +     40849 AC-A----TT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255251 5 +  14605196 ac-a----tt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4748 5 +     22231 AC-A----TT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65566 5 +    207309 AC-A----TT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6658 5 -     25401 AC-A----TT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32402 5 +     58159 AC-A----TT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32678 5 +     63561 AC-A----TT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32438 5 +     51148 AC-A----TT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557408 5 -   4542175 AC-A----TT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32422 5 +     51125 AC-A----TT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1901 5 +     19503 AC-A----TT
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8840 5 +     39866 AC-A----TT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3922 5 -      9282 AC-A----TT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43326 5 -     87950 AC-A----TT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43720 5 -     88961 AC-A----TT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8418 5 -     39403 AC-A----TT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43369 5 +     87928 AC-A----TT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8417 5 -     60166 AC-A----TT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15354 5 -     67232 AC-A----TT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43270 5 -     90634 AC-A----TT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44737 5 +     89403 AC-A----TT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178637 5 - 189387572 AC-A----TT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193454 5 -   9816681 AC-A----TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28597 5 +     69807 AT-G----TT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45778 5 -     80239 AT-G----TT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 4925 5 +      7663 GT-G----CT
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983355 5 +   4620579 ac-a----tt
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566865 5 -   2598838 AC-A----TT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4503 5 -      7103 AC-A----TT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5100 5 -     11706 AC-A----TT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8838 5 -     30655 AC-A----TT
i Propithecus_edwardsi.k141_635656                       C 0 I 3
s Propithecus_perrieri.k141_1496898                          35151 5 +     46564 AC-A----TT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95430 5 -     98465 AC-A----TT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9069 5 +     35169 AC-A----TT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38394 5 +     52041 GC-A----TG
i Psammomys_obesus.NESX01036366.1                        C 0 I 1
s Pteronotus_parnellii.KE847780.1                            52900 2 -     66298 AC--------
i Pteronotus_parnellii.KE847780.1                        C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5411 5 -     18639 AC-A----TT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841496 5 -  28871421 at-a----tt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538011 5 -   4952924 at-a----tt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099866 5 +  38429054 AC-A----TT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27966 5 +     91421 AC-G----TT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154450 5 -   7812017 AC-G----TT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8823 5 +     72585 AC-G----TT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53948 5 +     55069 AC-G----GT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023677 5 -  90668790 GC-C----TG
i Rattus_norvegicus.chr16                                C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                       2915477 5 +   3329780 AC-A----TT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2551 5 +      7119 AC-A----TT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123167 5 + 195417433 ac-a----tt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237393 5 -   7961872 AC-A----TT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 75995 5 -    116970 AT-A----TT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4722 5 +     27962 AC-A----TT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4616 5 +      6077 AC-A----TT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4706 5 +      5971 AC-A----TT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4627 5 +      5932 AC-A----TT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2969 5 -      4390 AC-A----TT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392406 5 - 209938924 AC-A----TT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4575 5 +      5979 AC-A----TT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1145 5 -     22275 AC-A----TT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8623 5 +     16473 AC-A----GT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109742 5 + 121099817 ac-a----tt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31309 5 -     47369 AC-A----TT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31695 5 -     79414 AC-A----TT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28386 5 -     34454 AC-A----TT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15787 5 -     22428 AC-A----TT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30941 5 -     47109 AC-A----TT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238987 5 +   5703754 AC-A----TT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8577 5 +     21866 AC-A----TT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116639 5 +    313613 AC-A----TT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26292 5 +     27374 AC-G----TT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29804 5 +     58920 AA-G----TT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16302 5 -     45317 AC-G----TT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23960 5 -     42441 AC-G----TT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26638 5 -     29113 AC-G----TT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29713 5 -     48123 AC-G----TT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864911 5 -   1910179 AC-A----TT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672021 5 +  18376816 ac-a----tt
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869131 5 +   3870691 AC-A----TT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7498 5 -     97271 AC-A----TT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 2
s Suricata_suricatta.SurSur_flattened_line_6629             125636 5 +    196729 AC-A----TT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644525 5 +  69701581 ac-a----tt
i Sus_scrofa.CM000828.4                                  C 0 I 162
s Symphalangus_syndactylus.tarseq_199                       391893 5 +   1523678 AC-A----TT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15071 5 +     22964 AC-A----TT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3500 4 +      5583 AC-A----C-
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192378 5 +    199430 AC-G----TT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106346 5 -    539355 AC-G----TT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1411 5 +      9917 AC-A----TT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8209 5 +     20590 AC-A----TT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354145 5 - 186847797 ac-a----tt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24834 5 -     33621 AA-A----TG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20487 4 -     31044 AC-A----C-
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480898 2 -    610378 AC--------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 1
s Trachypithecus_auratus.k141_1189070                        21837 5 +     26378 AC-G----TT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34513 5 -     78344 AC-G----TT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21162 5 +     25722 AC-G----TT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29469 5 -     62838 AC-G----TT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29513 5 +     46913 AC-G----TT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10322 5 -     28527 AC-G----TT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31404 5 -     64340 AC-G----TT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29442 5 -     63452 AC-G----TT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10889 5 +     22490 AC-G----TT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4312 5 -      6147 AC-G----TT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11225 5 -     13050 AC-G----TT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256455 5 -   6242583 AC-G----TT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2483 5 +     19340 AC-G----TT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174232 5 -    200418 AC-A----TT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482321 5 -  10818551 tc-a----tt
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835135 5 -   4065304 AC-A----TT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9155 5 -     70247 AC-A----TT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366471 5 -  33153633 ac-a----tt
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4363 5 -     21056 AC-A----TT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182801 5 +   5085361 ac-a----tt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26011 5 -     30710 AC-A----TT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24918 5 -    147434 AC-A----TT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77058 5 +   5488506 ac-a----tt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105723 5 -    112863 AC-A----GT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29834 5 -     86975 AC-A----TT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       755 5 -      1899 GC-A----TT
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1755 5 +      2126 AC-A----TT
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Xerus_inauris.XerIna_scaffold_2302                        174902 2 -    224448 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922 6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549 6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339 6 -     41509 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 50879 15 -    140813 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6188 14 +     36723 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
s Acinonyx_jubatus.LLWD01001279.1                           813613 14 +   1699592 T--G----T-A-CTT---TG-------------------G-----A--------C---A-C
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Acomys_cahirinus.AcoCah_scaffold_21377                     25992  9 +     63021 -------------TT---AG-------------------G-----A--------G---A-T
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416070 14 +  29979442 t--t----t-a-ctt---AG-------------------G-----A--------G---A-T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 2
s Ailurus_fulgens.LNAC01001112.1                            216415 14 +    347723 t--t----t-a-ctt---AG-------------------G-----A--------G---A-C
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 2
s Allactaga_bullata.AllBul_scaffold_20030                    18978 14 -     61208 T--C----T-G-TTT---CA-------------------G-----A--------G---A-T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48833 14 +     53615 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           864 14 +     13857 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17415 14 -     21945 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19100 14 +     32033 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72934 14 -     84148 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45173 14 -     78289 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44612 14 +     55831 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43062 14 -     64179 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            169 14 -      3959 t--t----t-a-ctt---GT-------------------A-----A--------G---A-T
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             41687 14 +     45454 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47336 14 +     70886 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9509 14 +     30854 T--T----T-A-CTT---AT-------------------A-----A--------G---A-T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33643 14 +     42133 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586073 14 +   2318259 t--t----t-a-caT---AG-------------------G-----A--------A---A-T
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      177864 17 -    412891 A--T----T-A-CTCTGGAG-------------------G-----A--------A---A-C
i Anoura_caudifer.AnoCau_scaffold_1412                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51180 14 -     68529 T--T----T-A-CAC---AG-------------------G-----A--------A---A-T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 2
s Aotus_azarae.k141_887050                                    1900 14 +     17741 T--T----T-A-TTC---GT-------------------A-----A--------A---A-T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2525 14 -     15923 T--T----T-A-TTC---AT-------------------A-----A--------A---A-T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672807 14 +   5030052 t--t----t-a-ttc---gT-------------------A-----A--------A---A-T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2801 14 -     16391 T--T----T-A-TTC---GT-------------------A-----A--------A---A-T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2360 14 -     17186 T--T----T-A-TTC---GT-------------------A-----A--------A---A-T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16876 33 -     32367 T--T----T-G-CCT---AAGAATGACATGTTTGCTTAAG-----A--------A---A-T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20967 14 -     45910 T--T----T-A-CTT---AG-------------------G-----A--------C---A-A
i Arctocebus_calabarensis.k141_1364444                   C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6130 17 -     15198 A--T----T-A-CTCTGGAG-------------------G-----A--------G---A-C
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275397 14 +  21539123 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11565 14 +     48076 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6700 14 -     28759 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34254 14 +     44353 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49625 14 -     71267 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23683 14 -     33135 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6975 14 +     11645 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6983 14 -     19611 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964212 14 -  23207421 t--t----a-a-cat---AG-------------------G-----A--------A---A-C
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 2
s Balaenoptera_bonaerensis.DF411050.1                          712 14 -     25979 t--t----a-a-cat---AG-------------------G-----A--------A---A-C
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_7278                     87081 14 +    124022 T--T----T-A-CAT---AG-------------------G-----A--------A---A-T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 2
s Bison_bison.KN261452.1                                     22623 14 +    288883 T--T----T-A-CAT---GG-------------------G-----A--------A---A-T
i Bison_bison.KN261452.1                                 C 0 I 2
s Bos_indicus.CM003047.1                                  20357013 14 +  48749331 T--T----T-A-CAT---GG-------------------G-----A--------A---A-T
i Bos_indicus.CM003047.1                                 C 0 I 2
s Bos_mutus.JH880303.1                                      755577 14 +   1948126 T--T----T-A-CAT---GG-------------------G-----A--------A---A-T
i Bos_mutus.JH880303.1                                   C 0 I 2
s Bos_taurus.CM000203.6                                   27545719 14 -  45695690 T--T----T-A-CAT---GG-------------------G-----A--------A---A-T
i Bos_taurus.CM000203.6                                  C 0 I 2
s Bubalus_bubalis.KI419123.1                               1530734 14 -   4408762 T--T----T-A-CAT---GG-------------------G-----A--------A---A-T
i Bubalus_bubalis.KI419123.1                             C 0 I 2
s Cacajao_ayresi.k141_96119                                   8573 14 +     28062 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43867 14 -     91139 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21393 14 +     95584 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21306 14 +    119600 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10880 14 +     18648 T--T----T-A-CTT---GT-------------------G-----A--------G---A-T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10414 14 -     13885 T--T----T-A-CTA---GT-------------------G-----A--------G---A-T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2485 14 -      8861 T--T----T-A-CTT---GT-------------------G-----A--------G---A-T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454877 14 + 189096842 T--T----T-A-CTT---GT-------------------G-----A--------G---A-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2400 14 +      8664 T--T----T-A-CTT---GT-------------------G-----A--------G---A-T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631731 14 +  17673402 t--t----a-a-caT---AG-------------------G-----A--------A---A-C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666018 14 +   7040546 T--T----A-A-CAT---AG-------------------G-----A--------A---A-C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209677 14 +   1652518 t--t----a-a-caT---AG-------------------G-----A--------A---A-C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506097 15 +  60362399 T--T----T-ATTTT---AG-------------------G-----A--------G---A-T
i CanFam4.chr16                                          C 0 I 2
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9733 15 -     23171 T--T----T-ATTTT---AG-------------------G-----A--------G---A-T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 2
s Canis_lupus_dingo.QKWQ01000480.1                          223076 15 +   9314153 t--t----t-atttt---ag-------------------g-----A--------G---A-T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 2
s Canis_lupus_familiaris.chr16                            41616211 15 +  59632846 t--t----t-atttt---ag-------------------g-----A--------G---A-T
i Canis_lupus_familiaris.chr16                           C 0 I 2
s Canis_lupus_orion.HG994398.1                            45107792 15 -  63665305 t--t----t-atttt---ag-------------------g-----A--------G---A-T
i Canis_lupus_orion.HG994398.1                           C 0 I 2
s Capra_aegagrus.CM003241.1                               27409802 14 -  46296322 T--T----T-A-CAT---AG-------------------G-----A--------A---A-T
i Capra_aegagrus.CM003241.1                              C 0 I 2
s Capra_hircus.CM004588.1                                 26592076 14 +  44709034 T--T----T-A-CAT---AG-------------------G-----A--------A---A-T
i Capra_hircus.CM004588.1                                C 0 I 2
s Capromys_pilorides.CapPil_scaffold_762519                    244 14 -      1607 T--T----T-G-CTT---AT-------------------G-----A--------G---A-T
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271184 14 +    496798 t--t----t-a-ctT---AG-------------------G-----A--------G---T-T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871                986 21 +      9923 G--TTAGTT-A-CTCTGGAG-------------------G-----A--------G---A-C
i Carollia_perspicillata.CarPer_scaffold_107871          I 1 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28388  9 -     39886 -------------TT---AA-------------------G-----T--------G---A-T
i Castor_canadensis.CasCan_scaffold_39952                I 3 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80273 16 -    217609 TTTT----T-G-CAT---AG-------------------G-----A--------A---A-C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 2
s Cavia_aperea.AVPZ01000300.1                              4997115 14 +  23392119 t--t----t-t-ctt---at-------------------g-----a--------g---a-t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000556 14 +  23407841 t--t----t-t-ctt---at-------------------g-----a--------g---a-t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63637 14 -     66877 T--T----T-T-CTT---AT-------------------G-----A--------G---A-T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5798 14 -     12580 T--T----T-A-CTT---GT-------------------G-----A--------G---A-T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43855 14 +     53515 T--T----T-A-CTT---GT-------------------G-----A--------G---A-T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373618 14 -  26074798 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8672 14 -     34880 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67768 14 -     89041 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3144 14 -      5494 T--T----T-A-CTT---AG-------------------G-----A--------G---T-T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492898 14 -  27778364 t--t----t-a-ctT---AG-------------------G-----A--------G---A-C
i Ceratotherium_simum.JH767749.1                         C 0 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19731 14 +     27315 T--T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 2
s Cercocebus_atys.KQ010504.1                                141982 14 -   4669795 t--t----t-a-ctt---gT-------------------A-----A--------G---A-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45726 14 +     47900 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1154 14 -     14410 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45538 14 -    148725 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27747 14 -     40656 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7711 14 +     20796 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12829 14 -     17524 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28552 14 -     34525 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12332 14 -     25376 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364919 14 -  39242232 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270646 14 +  21565898 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33014 14 -     45857 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27915 14 -     32606 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4077 14 +      8499 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26473 14 +     70610 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23434 14 +     36323 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             31349 14 -     33796 T--T----C-G-CTT---AG-------------------G-----A--------G---A-T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5863 14 -     15404 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9680 14 -     32913 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20093 14 -     40346 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20348 14 +    216457 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20141 14 +     39636 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239483 14 -   2543920 T--T----T-G-CTT---AT-------------------G-----G--------G---A-T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4729 14 +      5346 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43204 14 -    112038 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8755 14 +     34062 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344335 14 +  18827391 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10879 14 -     44032 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305660 14 - 135778131 t--t----t-a-ctt---gT-------------------A-----A--------G---A-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2236 10 +      2406 ------------TAA---AG-------------------G-----A--------G---A-T
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          I 3 C 0
s Colobus_angolensis.KN981557.1                             410065 14 -   2368649 t--t----t-a-ctt---gT-------------------A-----A--------C---A-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379946 14 - 200372422 T--T----T-A-CTT---GT-------------------A-----A--------C---A-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3503 14 -     84244 T--T----T-A-CTT---GT-------------------A-----A--------C---A-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807968 13 +  53390261 ---t----t-a-ctt---AG-------------------G-----T--------G---A-C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3500 13 -      8242 ---T----T-A-CTT---TG-------------------G-----A--------A---A-C
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44894 10 -     83289 -------------AT---GA-------------------A-----A--------G---AGT
i Cricetomys_gambianus.CriGam_scaffold_14425             I 1 C 0
s Cricetulus_griseus.LT883664.1                          213115570  9 - 224834208 -------------TT---AA-------------------A-----G--------G---A-T
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10084 14 +     12657 T--T----T-A-CTT---AG-------------------A-----A--------G---C-T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5058 14 +     87169 T--T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Ctenodactylus_gundi.CteGun_scaffold_65                    646124 15 -   1526836 T--T----TAA-CTT---AT-------------------A-----A--------C---A-T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19031 14 +     50838 T--T----T-G-CTC---AT-------------------G-----A--------G---A-T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5040 14 +     36344 T--T----T-T-CTT---AT-------------------G-----A--------G---C-T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28817 14 +     75252 T--T----T-T-CTT---AT-------------------G-----A--------G---A-T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293285 14 +  12879189 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632620 14 -  35494412 t--t----t-a-cat---AG-------------------G-----A--------A---A-C
i Delphinapterus_leucas.KZ290073.1                       C 0 I 2
s Desmodus_rotundus.KZ672289.1                            11866053 17 -  20541912 G--T----T-A-CTCTGGAG-------------------G-----A--------G---A-C
i Desmodus_rotundus.KZ672289.1                           I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665182 14 -   1390856 T--T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 2
s Diceros_bicornis.DicBicMic_scaffold_5955                  139975 14 -    198055 T--T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 2
s Dinomys_branickii.DinBra_scaffold_10381                    99565 14 -    115145 T--G----T-G-CTT---AT-------------------G-----A--------T---A-T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951261 22 -  37912305 T--T----T-A-CTT---AA-------------------GATGAGT--------TGTTC-T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6193 22 -     10735 T--T----T-A-CTT---AA-------------------GATGAGT--------TGTTC-T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856259  2 - 111700974 T--T---------------------------------------------------------
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6961 14 +     19438 t--t----t-a-ctt---aG-------------------G-----A--------G---A-A
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240440 14 -    607251 T--T----T-A-CAT---AG-------------------G-----A--------A---A-T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 2
s Elephantulus_edwardii.JH947257.1                         1226448 14 +  10337057 t--t----t-a-ttt---ag-------------------g-----A--------A---G-C
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31705  9 +    110024 -------------TT---AG-------------------G-----A--------G---A-C
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01026522.1                           13676  9 +     18970 -------------TT---AG-------------------G-----A--------G---A-T
i Ellobius_talpinus.LOJH01026522.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               24916821 14 +  41312741 t--t----t-a-ctT---AG-------------------G-----A--------G---A-C
i Enhydra_lutris.KZ291758.1                              C 0 I 2
s Eptesicus_fuscus.JH977646.1                             12579604 14 +  14770903 t--t----t-a-ctt---aG-------------------G-----G--------G---A-C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042103 14 -   4378816 T--T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Equus_asinus.JREZ01000139.1                            C 0 I 2
s Equus_caballus.CM000403.2                               21376041 14 +  39960074 t--t----t-a-ctt---AG-------------------G-----A--------G---A-C
i Equus_caballus.CM000403.2                              C 0 I 2
s Equus_przewalskii.KK951119.1                              412023 14 -    498745 t--t----t-a-ctt---AG-------------------G-----A--------G---A-C
i Equus_przewalskii.KK951119.1                           C 0 I 2
s Erinaceus_europaeus.JH835339.1                           3666745  9 +   7059049 T--A----A-G-CTT---AT-----------------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 4
s Erythrocebus_patas.Contig38                               263871 14 +  21539334 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71826 14 -    133382 T--T----T-A-CAT---AG-------------------G-----A--------A---A-C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_257977              413 14 -      1072 T--T----T-A-CAT---AG-------------------G-----A--------G---A-C
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 I 2
s Eulemur_albifrons.k141_51491                               15490 14 -     24895 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43200 14 -     70999 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87170 14 +    112731 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43732 14 +     68309 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54057 14 -     65740 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24689 14 -     75513 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48884 14 -     97555 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5608 14 +     30972 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43328 14 -     52037 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59731 14 -    111500 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247522 14 - 206538554 T--G----T-A-CTT---TG-------------------G-----A--------G---A-C
i Felis_catus.CM001381.2                                 C 0 I 2
s Felis_catus_fca126.CM031415.1                          185117308 14 - 205367284 T--G----T-A-CTT---TG-------------------G-----A--------G---A-C
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_31944                 28406 14 -     30238 T--G----T-A-CTT---TG-------------------G-----A--------G---A-C
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 2
s Fukomys_damarensis.KN121974.1                            2922688 14 -   3816255 T--T----T-G-CTT---AT-------------------G-----A--------A---A-t
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126336 14 -    137831 T--T----T-A-CTT---AG-------------------G-----A--------A---A-A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9881 14 +     22493 T--T----T-A-CTT---AG-------------------G-----A--------A---A-A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21951 14 -     32986 T--T----T-A-CTT---AG-------------------G-----A--------A---A-A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1860 14 -     28519 T--T----T-A-CTT---AG-------------------G-----A--------A---A-T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92146 14 -     95226 T--T----T-A-CAT---AG-------------------G-----A--------A---A-T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 2
s Glis_glis.GliGli_scaffold_33859                            35178 14 -     36801 T--T----T-A-ATT---AA-------------------G-----A--------G---G-T
i Glis_glis.GliGli_scaffold_33859                        C 0 N 0
s Gorilla_beringei.k141_3358147                               6488 14 -      8343 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255503 14 - 186649187 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Gorilla_gorilla.LT578341.1                             I 5 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2659 14 -     78134 T--T----T-A-CTT---AA-------------------G-----A--------G---A-T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15419 14 -     40692 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36821 14 +     49394 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61689 14 -     66874 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10563 14 -     42923 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17562 14 -     53142 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31500 14 -    327341 T--T----T-A-CTT---AT-------------------G-----A--------G---A-C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9820 14 +     48891 T--T----T-A-CAT---AG-------------------G-----A--------A---A-T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 2
s Heterocephalus_glaber.JH602082.1                         1933099 14 -  22651954 T--T----T-G-CTC---AT-------------------G-----A--------A---A-T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                 940 14 +      8654 T--T----T-G-TTC---TG-------------------C-----A--------G---A-C
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8328 14 -     36432 T--T----T-A-CAT---AG-------------------G-----A--------A---A-C
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                      1552320 13 -   1711038 T--T----T-A-TTT---TG-------------------G-----A--------G---A--
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1758 14 -      2730 T--T----T-A-CTT---TG-------------------G-----A--------G---A-T
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143512 14 -    630532 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70668 14 +     83186 T--T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 4
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72560 14 +    143317 T--T----T-T-CTT---AT-------------------G-----A--------G---A-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6546 14 +     12352 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13730 14 +     55766 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053330 14 + 191637585 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802208 14 +  11177569 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7848 14 -    135385 T--T----T-G-CTT---CT-------------------G-----A--------G---A-T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387558 14 +   7955117 T--T----T-A-CAG---AA-------------------A-----A--------G---A-T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3119 14 +     11955 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10721 14 -     16823 T--T----T-A-CAT---AG-------------------G-----A--------A---A-C
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 2
s Jaculus_jaculus.JH725527.1                               1240695 14 +   9596543 t--t----t-a-ttt---ca-------------------g-----a--------c---a-t
i Jaculus_jaculus.JH725527.1                             C 0 I 120
s Kogia_breviceps.KogBre_flattened_line_3970                 72561 14 -     97402 T--T----T-A-CAT---AG-------------------G-----A--------A---A-C
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 2
s Lagothrix_lagothricha.k141_246028                          43948 14 +    110728 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63585 14 -     65777 T--T----T-A-CTT---AA-------------------G-----G--------G---A-C
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 2
s Lemur_catta.scaffold_24                                 14760212 14 +  30322482 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4851 14 -     13097 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4605 14 +      5940 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4428 14 -      5717 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10820 14 -     11567 T--T----T-A-CTT---GT-------------------G-----A--------G---A-T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12201 14 -     12945 T--T----T-A-CTT---GT-------------------G-----A--------G---A-T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9724 14 +     29618 T--T----T-G-CTT---GG-------------------G-----A--------G---A-T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9720 14 +     31569 T--T----T-G-CTT---GG-------------------G-----A--------G---A-T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9730 14 +     24756 T--T----T-G-CTT---GG-------------------G-----A--------G---A-T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9730 14 +     16388 T--T----T-G-CTT---GG-------------------G-----A--------G---A-T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814203 14 -   3914936 t--t----t-a-ctT---AG-------------------G-----A--------G---A-C
i Leptonychotes_weddellii.KB714746.1                     C 0 I 2
s Lepus_americanus.LepAme_scaffold_56121                     18570  9 +     24238 -------------TT---GG-------------------G-----A--------G---A-T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341906 14 +    662738 t--t----t-a-cat---AG-------------------G-----A--------A---A-C
i Lipotes_vexillifer.KE559953.1                          C 0 I 2
s Lophocebus_aterrimus.ctg367                               334867 14 -   1826925 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12034 14 +     19643 T--T----T-A-CTT---AG-------------------G-----A--------C---A-A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045704 14 -   6120653 T--T----T-A-CTT---AG-------------------G-----A--------C---A-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085607 14 +  43346337 T--T----T-A-TTT---AG-------------------G-----A--------G---A-C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615366 15 +  59628241 t--t----t-atttt---ag-------------------g-----A--------G---A-T
i Lycaon_pictus.CM007581.1                               C 0 I 2
s Macaca_arctoides.k141_1757516                              46256 14 -     61512 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373918 14 -  60120075 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26186 14 +     30207 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1024 14 -      5035 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26139 14 +     30527 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37315 14 -     50087 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47059 14 +     51645 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416262 14 - 187317192 t--t----t-a-ctt---gT-------------------A-----A--------G---A-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400492 14 +  25927173 t--t----t-a-ctt---gT-------------------A-----A--------G---A-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49664 14 -     62418 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2195 14 +     14901 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46136 14 +     59329 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272044 14 +    668171 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   682 14 -      5049 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3842 14 +     17132 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223929 14 -    270270 T--T----T-A-CTT---AG-------------------G-----A--------G---A-A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323332 14 +  24302211 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358163 14 -    752769 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674256 14 -    737560 T--T----T-A-CTG---AG-------------------G-----A--------G---A-C
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221552 14 +    317179 T--T----T-A-CTG---AG-------------------G-----A--------G---A-C
i Manis_pentadactyla.KN006162.1                          C 0 I 2
s Marmota_marmota.CZRN01000018.1                           7501762 14 +  40650429 T--T----T-A-CAG---AA-------------------A-----A--------G---A-T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151098 14 +    207569 T--T----T-A-CTT---TG-------------------G-----A--------G---A-C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26920 14 -     74585 T--T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 2
s Meriones_unguiculatus.MerUng_scaffold_7390                 50894  1 -    140813 ------------------------------------------------------------C
i Meriones_unguiculatus.MerUng_scaffold_7390             I 15 C 0
s Mesocricetus_auratus.KB708134.1                         17429952  9 +  29670104 -------------TT---AG-------------------G-----G--------G---A-T
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88190 14 +     93471 T--T----T-A-CAT---AG-------------------G-----A--------A---A-C
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 2
s Mico_argentatus.k141_582562                                10987 14 +     17804 T--T----T-A-CTT---GT-------------------G-----A--------G---A-T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11487 14 -     12984 T--T----T-A-CTT---GT-------------------G-----A--------G---A-T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19803 14 -     26561 T--T----T-A-CTT---GT-------------------G-----A--------G---A-T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985562 14 +  93316391 t--t----t-g-cTT---AG-------------------G-----A--------G---A-T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47494  2 +    145209 A--G---------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185783 17 +    200668 A--T----T-A-CTCTGGAG-------------------G-----A--------G---A-C
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 1 C 0
s Microtus_ochrogaster.CM001695.1                         15963147  9 +  27267610 -------------TT---AG-------------------G-----A--------G---A-T
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363940 14 -   8254450 T--T----G-A-CTT---TG-------------------G-----A--------G---A-C
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42847 14 -     48117 T--T----T-A-CTT---TG-------------------G-----A--------G---A-C
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23366 14 -     27822 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9214 14 +     27589 T--T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 2
s Mirza_zaza.k141_766280                                     53345 14 -     62432 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360295 14 +    437263 T--T----T-A-CAT---AG-------------------G-----A--------A---A-C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180010 14 +    366855 G--T----T-A-CTT---AC-------------------G-----A--------G---A-C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26266 14 -     82753 T--T----T-A-CAT---AG-------------------G-----A--------A---A-T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 2
s Mungos_mungo.MunMun_flattened_line_18455                   19225 14 -     63510 T--T----T-A-CTT---AT-------------------G-----A--------G---A-C
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 2
s Murina_feae.MurFea_scaffold_17764                          39907 14 +     47283 T--T----T-A-CTT---AG-------------------C-----G--------G---A-C
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593859 10 + 120012414 -------------TT---AG-------------------A--G--A--------G---A-T
i Mus_caroli.LT608237.1                                  I 1 C 0
s Mus_musculus.chr8                                       41688248 10 + 129401213 -------------TT---AG-------------------A--G--A--------G---A-T
i Mus_musculus.chr8                                      I 1 C 0
s Mus_spretus.CM004101.1                                  39497542 10 + 130317789 -------------TT---AG-------------------A--G--A--------G---A-T
i Mus_spretus.CM004101.1                                 I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84217 14 -     86153 T--C----T-A-CAT---AA-------------------G-----A--------T---G-T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355842 14 +  14710649 t--t----t-a-ctt---aG-------------------G-----A--------G---A-C
i Mustela_putorius.JH418006.1                            C 0 I 2
s Myocastor_coypus.MyoCoy_scaffold_15261                     63814 14 +     67721 T--T----T-G-CTC---AT-------------------G-----G--------G---G-T
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794163 14 +  10118263 t--t----t-a-ctt---aG-------------------G-----G--------G---A-C
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388336 14 +   6019432 t--t----t-a-ctt---aG-------------------G-----G--------G---A-C
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384123 14 +   4330536 t--t----t-a-ctt---aG-------------------G-----G--------G---A-C
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3157 14 +     18357 T--T----T-A-CTT---AG-------------------G-----G--------G---A-C
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             947438 14 +   3037898 T--T----T-A-TTG---AA-------------------G-----A--------G---A-T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30022 14 +     34575 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232961 14 -   7148211 t--t----t-a-cat---AG-------------------G-----A--------A---A-C
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_7894                   128966 14 -    149072 A--T----T-G-CTT---AG-------------------G-----A--------G---A-C
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54438 14 -    132029 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10533 14 -     16345 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16418 14 +     22201 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414639 14 -  22158432 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26816 14 -     54323 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198962 15 +   9404916 t--t----t-atttt---ag-------------------g-----A--------G---A-T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 2
s Nycticebus_bengalensis.LG01                             93638933 14 + 196305487 T--T----T-A-CTT---AG-------------------G-----A--------C---A-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1536 14 -      9413 T--T----T-A-CTT---AG-------------------G-----A--------C---A-A
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566316 14 - 199412804 T--T----T-A-CTT---AG-------------------G-----A--------C---A-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557627 14 -   3988456 T--T----T-C-TTT---AG-------------------G-----A--------G---A-G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055770 14 -  11899542 t--t----t-g-ctC---AT-------------------G-----A--------G---A-T
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452631 14 +   2017862 t--t----t-a-ctt---AG-------------------G-----A--------G---A-C
i Odobenus_rosmarus.KB229312.1                           C 0 I 2
s Odocoileus_virginianus.KZ100018.1                         437036 14 -    630418 T--T----T-A-CAT---AG-------------------G-----A--------A---A-T
i Odocoileus_virginianus.KZ100018.1                      C 0 I 2
s Okapia_johnstoni.LVCL01S0005463.1                          15230 14 +    150152 T--T----T-A-CAT---AG-------------------G-----A--------A---A-T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 2
s Ondatra_zibethicus.OndZib_scaffold_7387                    93501  9 -    140218 -------------TT---AG-------------------G-----A--------G---A-T
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 C 0
s Orcinus_orca.KB316932.1                                  8103363 14 +  10937097 t--t----t-a-cat---ag-------------------g-----a--------A---A-C
i Orcinus_orca.KB316932.1                                C 0 I 2
s Oryctolagus_cuniculus.CM000791.1                       107104366  9 - 174332312 -------------TT---GG-------------------G-----A--------G---A-T
i Oryctolagus_cuniculus.CM000791.1                       I 5 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                415  3 +     11607 T--T----T----------------------------------------------------
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40007 15 +    559221 t--t----t-atttt---ag-------------------g-----A--------G---A-T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Otolemur_crassicaudatus.k141_649260                        41484 14 -     51505 T--T----T-A-CTT---AG-------------------G-----A--------A---A-A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354487 14 +   1103335 T--T----T-A-CTT---AG-------------------G-----A--------A---A-A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404940 14 -  44047080 T--T----T-A-CAT---AG-------------------G-----A--------A---A-T
i Ovis_aries.CM001607.2                                  C 0 I 2
s Ovis_canadensis.OviCan_scaffold_67953                       5459 14 +     17875 T--T----T-A-CAT---AG-------------------G-----A--------A---A-T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 2
s Pan_troglodytes.NBAG03003091.1                             13184 23 -     26668 A--T----ATA-CTT---GA-------------------G-----AATCCCAATG---A-T
i Pan_troglodytes.NBAG03003091.1                         C 0 I 4
s Panthera_onca.PanOnc_flattened_line_3271                   25229 14 -    230217 T--G----T-A-CTT---TG-------------------G-----A--------G---A-C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                              18462555 14 -  18783137 T--G----T-A-CTT---TG-------------------G-----A--------G---A-C
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               3973214 14 +   8748460 T--G----T-A-CTT---TG-------------------G-----A--------G---A-C
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1616468 14 +   2937107 T--T----T-A-CAT---AG-------------------G-----A--------A---A-T
i Pantholops_hodgsonii.KE114653.1                        C 0 I 2
s Papio_anubis.CM001495.2                                   244164 14 - 183742232 t--t----t-a-ctt---gT-------------------A-----A--------G---A-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10626 14 +     21308 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293199 14 -  20919399 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23274 14 -     27687 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16420 14 +     16796 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23231 14 -     23640 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15805 14 +     78924 T--T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 2
s Perodicticus_ibeanus.k141_1921260                          27814 14 +     31479 T--T----T-G-CTT---AG-------------------G-----A--------C---A-A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20182 14 -     24908 T--T----T-G-CTT---AG-------------------G-----A--------C---A-A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2607 20 +      9367 TT-T----T-A-CTT---AA-------------------GATGAAC--------T---T-T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32665 14 -     56120 T--T----T-T-CTT---AT-------------------G-----A--------A---A-T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4889 14 -     63832 T--T----T-A-CAT---AG-------------------G-----A--------A---A-C
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 2
s Piliocolobus_badius.k141_2704958                            3453 14 +     55023 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         2991 14 -     89929 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3581 14 +     40849 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255256 14 +  14605196 t--t----t-a-ctt---gT-------------------A-----A--------G---A-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4753 14 +     22231 T--T----T-T-CTT---AG-------------------G-----G--------A---A-C
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65571 14 +    207309 T--T----T-A-CTT---GT-------------------A-----A--------A---A-T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6663 14 -     25401 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32407 14 +     58159 T--T----T-A-CTT---GT-------------------A-----A--------A---A-T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32683 14 +     63561 T--T----T-A-CTT---GT-------------------A-----A--------A---A-T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32443 14 +     51148 T--T----T-A-CTT---GT-------------------A-----A--------A---A-T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557413 14 -   4542175 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32427 14 +     51125 T--T----T-A-CTT---GT-------------------A-----A--------A---A-T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1906 14 +     19503 T--T----T-A-CAT---AG-------------------G-----A--------A---A-C
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 2
s Plecturocebus_bernhardi.k141_2549090                        8845 14 +     39866 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3927 14 -      9282 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43331 14 -     87950 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43725 14 -     88961 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8423 14 -     39403 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43374 14 +     87928 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8422 14 -     60166 T--T----T-A-CTT---CT-------------------A-----A--------G---A-T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15359 14 -     67232 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43275 14 -     90634 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44742 14 +     89403 T--T----T-A-CTT---CT-------------------A-----A--------G---A-T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178642 14 - 189387572 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193459 14 -   9816681 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28602 14 +     69807 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45783 14 -     80239 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 4930 14 +      7663 T--T----T-G-TTC---CG-------------------C-----A--------G---A-C
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983360 14 +   4620579 t--t----t-g-ctT---AG-------------------G-----A--------G---A-T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566870 14 -   2598838 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4508 14 -      7103 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5105 14 -     11706 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8846 10 -     30655 ------------CTT---AG-------------------G-----A--------G---A-T
i Propithecus_edwardsi.k141_635656                       I 3 C 0
s Propithecus_perrieri.k141_1496898                          35156 14 +     46564 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95435 14 -     98465 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9074 14 +     35169 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38400  9 +     52041 -------------TT---AG-------------------G-----A--------G---A-T
i Psammomys_obesus.NESX01036366.1                        I 1 C 0
s Pteronotus_parnellii.KE847780.1                            52903 14 -     66298 A--T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Pteronotus_parnellii.KE847780.1                        I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5416 14 -     18639 T--T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 2
s Pteropus_alecto.KB030862.1                               5841501 14 -  28871421 t--t----t-a-ctt---GG-------------------G-----A--------G---A-A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538016 14 -   4952924 t--t----t-a-ctt---AG-------------------G-----A--------G---A-A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099871 14 +  38429054 T--G----T-A-CTT---TG-------------------G-----A--------G---A-C
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                             27971 14 +     91421 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154455 14 -   7812017 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8828 14 +     72585 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53953 14 +     55069 T--T----T-A-CAT---AG-------------------G-----A--------A---A-T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 2
s Rattus_norvegicus.chr16                                 37023683  9 -  90668790 -------------TC---AG-------------------G-----G--------G---A-T
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915482 13 +   3329780 T--T----C-A-CTT---T--------------------G-----A--------G---A-C
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2556 14 +      7119 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123172 14 + 195417433 t--t----t-a-ctt---gT-------------------A-----A--------G---A-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237398 14 -   7961872 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76000 14 -    116970 T--T----T-A-CTT---AG-------------------G-----A--------G---A-A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4727 14 +     27962 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4621 14 +      6077 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4711 14 +      5971 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4632 14 +      5932 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2974 14 -      4390 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392411 14 - 209938924 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4580 14 +      5979 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1150 14 -     22275 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8628 14 +     16473 T--T----T-A-TGT---AG-------------------G-----A--------A---A-C
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 2
s Saimiri_boliviensis.NW_024100920.1                       1109747 14 + 121099817 t--t----t-a-ctt---GT-------------------A-----A--------G---A-T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31314 14 -     47369 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31700 14 -     79414 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28391 14 -     34454 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15792 14 -     22428 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30946 14 -     47109 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     238992 14 +   5703754 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8582 14 +     21866 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116644 13 +    313613 ---T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26297 14 +     27374 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29809 14 +     58920 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16307 14 -     45317 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23965 14 -     42441 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26643 14 -     29113 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29718 14 -     48123 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864916 15 -   1910179 TT-T----T-A-CCT---AG-------------------G-----A--------G---A-T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672026 13 +  18376816 t--t----t-a-ctt----G-------------------G-----A--------G---A-C
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869136 14 +   3870691 T--T----T-A-CAG---AA-------------------A-----A--------G---A-T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7505 14 -     97271 T--T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 2 I 2
s Suricata_suricatta.SurSur_flattened_line_6629             125641 14 +    196729 T--T----T-A-CTT---AT-------------------G-----A--------G---A-C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                    6644692 16 +  69701581 tttt----t-a-cat---AG-------------------G-----A--------A---A-C
i Sus_scrofa.CM000828.4                                  I 162 I 2
s Symphalangus_syndactylus.tarseq_199                       391898 14 +   1523678 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15076 14 +     22964 T--T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192383 14 +    199430 T--T----T-A-CTT---AG-------------------G-----T--------G---A-C
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    106351 14 -    539355 T--T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 2
s Tarsius_lariang.k141_1733899                                1416 14 +      9917 T--T----T-A-CTT---AG-------------------G-----A--------G---T-T
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8214 14 +     20590 T--T----T-A-CTT---AG-------------------G-----A--------G---T-T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354150 14 - 186847797 t--t----t-a-ctt---gT-------------------A-----A--------G---A-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24839 14 -     33621 T--T----T-G-CTT---TT-------------------G-----A--------A---A-C
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480901 17 -    610378 A--C----A-C-TTCTGGAG-------------------G-----A--------G---A-C
i Tonatia_saurophila.TonSau_scaffold_294                 I 1 C 0
s Trachypithecus_auratus.k141_1189070                        21842 14 +     26378 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34518 14 -     78344 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21167 14 +     25722 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29474 14 -     62838 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29518 14 +     46913 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10327 14 -     28527 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31409 14 -     64340 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29447 14 -     63452 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10894 14 +     22490 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4317 14 -      6147 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11230 14 -     13050 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256460 14 -   6242583 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2488 14 +     19340 T--T----T-A-CTT---GT-------------------A-----A--------G---A-T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174237 14 -    200418 T--T----T-A-TGT---AG-------------------G-----A--------A---A-C
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 2
s Trichechus_manatus.JH594705.1                            6482326 14 -  10818551 t--t----t-a-ttt---ag-------------------g-----A--------G---A-C
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835140 14 -   4065304 T--T----T-A-CTT---AG-------------------A-----A--------G---A-T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9160 14 -     70247 T--T----T-A-CTT---AG-------------------A-----A--------G---A-T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366476 14 -  33153633 t--t----t-a-cat---aG-------------------G-----A--------A---A-C
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_46687                    4368 13 -     21056 ---T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182806 14 +   5085361 t--t----t-a-ctt---AG-------------------G-----A--------G---A-C
i Ursus_maritimus.KK499267.1                             C 0 I 2
s Varecia_rubra.k141_787544                                  26016 14 -     30710 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24923 14 -    147434 T--T----T-G-CTT---AG-------------------G-----A--------G---A-T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77063 14 +   5488506 t--t----a-a-caT---AG-------------------G-----A--------A---A-C
i Vicugna_pacos.KN270157.1                               C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_12041                105728 15 -    112863 T--T----T-ATTTT---AG-------------------G-----A--------G---A-T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 2
s Zalophus_californianus.ZalCal_flattened_line_17732         29839 14 -     86975 T--T----T-A-CTT---AG-------------------G-----A--------G---A-C
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_286923                       760 14 -      1899 T--T----T-A-TTT---AA-------------------G-----A--------G---A-T
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1760 14 +      2126 T--T----T-A-CAT---AG-------------------G-----A--------A---A-C
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 I 2
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Choloepus_hoffmanni.KN194906.1                            607119  0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_70559                 15544  0 +     15858 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   20491  0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2110764  0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13412  0 -     19938 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Xerus_inauris.XerIna_scaffold_2302                        174902  2 -    224448 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                3504  0 +      5583 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922  6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549  6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339  6 -     41509 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120513  0 +    130748 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6202 4 +     36723 A------C--AC
s Acinonyx_jubatus.LLWD01001279.1                           813629 2 +   1699592 G------C----
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26001 4 +     63021 A------C--AT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416086 2 +  29979442 A------C----
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 2 C 0
s Ailurus_fulgens.LNAC01001112.1                            216431 2 +    347723 A------C----
i Ailurus_fulgens.LNAC01001112.1                         I 2 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18992 4 -     61208 A------A--AT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   48847 4 +     53615 A------C--AC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           878 4 +     13857 A------C--AC
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17429 4 -     21945 A------C--AC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19114 4 +     32033 A------C--AC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72948 4 -     84148 A------C--AC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45187 4 -     78289 A------C--AC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44626 4 +     55831 A------C--AC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43076 4 -     64179 A------C--AC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            183 4 -      3959 A------C--AC
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             41701 4 +     45454 A------C--AC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47350 4 +     70886 A------C--AC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9523 4 +     30854 A------C--AC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33657 4 +     42133 A------C--AC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586089 2 +   2318259 A------C----
i Ammotragus_lervia.NIVO01071767.1                       I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177881 4 -    412891 ATG----C----
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51196 2 -     68529 A------C----
i Antilocapra_americana.AntAmePen_scaffold_21030         I 2 C 0
s Aotus_azarae.k141_887050                                    1914 4 +     17741 A------C--AC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2539 4 -     15923 A------C--AC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672821 4 +   5030052 A------C--AC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2815 4 -     16391 A------C--AC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2374 4 -     17186 A------C--AC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16909 1 -     32367 ----------A-
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20983 2 -     45910 ----------AC
i Arctocebus_calabarensis.k141_1364444                   I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6147 4 -     15198 ATG----C----
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275411 4 +  21539123 A------C--AC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11579 4 +     48076 A------C--AC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6714 4 -     28759 A------C--AC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34268 4 +     44353 A------C--AC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49639 4 -     71267 A------C--AC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23697 4 -     33135 A------C--AC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6989 4 +     11645 G------C--AC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               6997 4 -     19611 G------C--AC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964228 2 -  23207421 A------C----
i Balaenoptera_acutorostrata.KI537508.1                  I 2 C 0
s Balaenoptera_bonaerensis.DF411050.1                          728 2 -     25979 A------C----
i Balaenoptera_bonaerensis.DF411050.1                    I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87097 2 +    124022 A------C----
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 2 C 0
s Bison_bison.KN261452.1                                     22639 2 +    288883 A------C----
i Bison_bison.KN261452.1                                 I 2 C 0
s Bos_indicus.CM003047.1                                  20357029 2 +  48749331 A------C----
i Bos_indicus.CM003047.1                                 I 2 C 0
s Bos_mutus.JH880303.1                                      755593 2 +   1948126 A------C----
i Bos_mutus.JH880303.1                                   I 2 C 0
s Bos_taurus.CM000203.6                                   27545735 2 -  45695690 A------C----
i Bos_taurus.CM000203.6                                  I 2 C 0
s Bubalus_bubalis.KI419123.1                               1530750 2 -   4408762 A------C----
i Bubalus_bubalis.KI419123.1                             I 2 C 0
s Cacajao_ayresi.k141_96119                                   8587 4 +     28062 A------C--AC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43881 4 -     91139 A------C--AC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21407 4 +     95584 A------C--AC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21320 4 +    119600 A------C--AC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10894 4 +     18648 G------C--AC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10428 4 -     13885 G------C--AC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2499 4 -      8861 G------C--AC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454891 4 + 189096842 G------C--AC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2414 4 +      8664 G------C--AC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631745 2 +  17673402 A------C----
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666032 2 +   7040546 A------C----
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209691 2 +   1652518 A------C----
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506114 2 +  60362399 A------G----
i CanFam4.chr16                                          I 2 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9750 2 -     23171 A------G----
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 2 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223093 2 +   9314153 A------G----
i Canis_lupus_dingo.QKWQ01000480.1                       I 2 C 0
s Canis_lupus_familiaris.chr16                            41616228 2 +  59632846 A------G----
i Canis_lupus_familiaris.chr16                           I 2 C 0
s Canis_lupus_orion.HG994398.1                            45107809 2 -  63665305 A------G----
i Canis_lupus_orion.HG994398.1                           I 2 C 0
s Capra_aegagrus.CM003241.1                               27409818 2 -  46296322 A------C----
i Capra_aegagrus.CM003241.1                              I 2 C 0
s Capra_hircus.CM004588.1                                 26592092 2 +  44709034 A------C----
i Capra_hircus.CM004588.1                                I 2 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    258 4 -      1607 A------A--AC
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271198 4 +    496798 A------G--GC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1007 4 +      9923 ATG----C----
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28397 4 -     39886 A------C--AT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80291 2 -    217609 A------C----
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 C 0
s Cavia_aperea.AVPZ01000300.1                              4997129 4 +  23392119 g------a--at
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000570 4 +  23407841 g------a--at
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63651 4 -     66877 G------A--AT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5812 4 -     12580 G------C--AC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43869 4 +     53515 G------C--AC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373632 4 -  26074798 A------C--AC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8686 4 -     34880 A------C--AC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67782 4 -     89041 A------C--AC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3158 4 -      5494 A------G--GC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492914 2 -  27778364 A------C----
i Ceratotherium_simum.JH767749.1                         I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19747 2 +     27315 A------C----
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 2 C 0
s Cercocebus_atys.KQ010504.1                                141996 4 -   4669795 A------C--AC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45740 4 +     47900 A------C--AC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1168 4 -     14410 A------C--AC
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45552 4 -    148725 A------C--AC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27761 4 -     40656 A------C--AT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7725 4 +     20796 A------C--AC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12843 4 -     17524 A------C--AC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28566 4 -     34525 A------C--AC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12346 4 -     25376 A------C--AC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364933 4 -  39242232 A------C--AC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270660 4 +  21565898 A------C--AC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33028 4 -     45857 A------T--AC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27929 4 -     32606 A------C--AC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4091 4 +      8499 A------C--AC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26487 4 +     70610 A------C--AC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23448 4 +     36323 A------C--AC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13412 2 -     19938 A------C----
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31363 4 -     33796 G------C--AC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5877 4 -     15404 G------C--AC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9694 4 -     32913 A------C--AC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20107 4 -     40346 A------C--AC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20362 4 +    216457 A------C--AC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20155 4 +     39636 A------C--AC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239497 4 -   2543920 A------G--Ac
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4743 4 +      5346 G------C--AC
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43218 4 -    112038 A------C--AC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8769 4 +     34062 A------C--AC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344349 4 +  18827391 A------C--AC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10893 4 -     44032 A------C--AC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305674 4 - 135778131 A------C--AC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15544 2 +     15858 A------T----
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607119 2 -    839153 A------T----
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2246 2 +      2406 A------T----
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 I 1
s Colobus_angolensis.KN981557.1                             410079 4 -   2368649 A------C--AC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379960 4 - 200372422 A------C--AC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3517 4 -     84244 A------C--AC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807981 2 +  53390261 a------c----
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3513 2 -      8242 A------T----
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44904 4 -     83289 A------T--AA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115579 4 - 224834208 G------C--AC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10098 8 +     12657 AAGGAGAC----
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5074 2 +     87169 A------C----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646139 4 -   1526836 A------C--AC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19045 4 +     50838 A------A--AC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5054 4 +     36344 G------G--AC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28831 4 +     75252 G------G--AC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110764 2 -   2246927 C------C----
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293299 4 +  12879189 A------C--AC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632636 2 -  35494412 A------C----
i Delphinapterus_leucas.KZ290073.1                       I 2 C 0
s Desmodus_rotundus.KZ672289.1                            11866070 4 -  20541912 ACG----C----
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665198 2 -   1390856 A------C----
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139991 2 -    198055 A------C----
i Diceros_bicornis.DicBicMic_scaffold_5955               I 2 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99579 4 -    115145 A------G--AC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951283 4 -  37912305 C------C--CT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6215 4 -     10735 C------C--CT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6975 2 +     19438 A------c----
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240456 2 -    607251 A------C----
i Elaphurus_davidianus.JRFZ01104969.1                    I 2 C 0
s Elephantulus_edwardii.JH947257.1                         1226462 2 +  10337057 A------T----
i Elephantulus_edwardii.JH947257.1                       C 0 I 1
s Ellobius_lutescens.LOEQ01008920.1                          31714 4 +    110024 A------C--AC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13685 4 +     18970 A------C--AC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916837 2 +  41312741 A------c----
i Enhydra_lutris.KZ291758.1                              I 2 C 0
s Eptesicus_fuscus.JH977646.1                             12579618 2 +  14770903 A------C----
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042119 2 -   4378816 A------C----
i Equus_asinus.JREZ01000139.1                            I 2 C 0
s Equus_caballus.CM000403.2                               21376057 2 +  39960074 A------C----
i Equus_caballus.CM000403.2                              I 2 C 0
s Equus_przewalskii.KK951119.1                              412039 2 -    498745 A------C----
i Equus_przewalskii.KK951119.1                           I 2 C 0
s Erinaceus_europaeus.JH835339.1                           3666758 2 +   7059049 G------C----
i Erinaceus_europaeus.JH835339.1                         I 4 C 0
s Erythrocebus_patas.Contig38                               263885 4 +  21539334 A------C--AC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71842 2 -    133382 A------C----
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              429 2 -      1072 A------C----
i Eubalaena_japonica.EubJap_flattened_line_257977        I 2 C 0
s Eulemur_albifrons.k141_51491                               15504 4 -     24895 G------C--AC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43214 4 -     70999 G------C--AC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87184 4 +    112731 G------C--AC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43746 4 +     68309 G------C--AC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54071 4 -     65740 G------C--AC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24703 4 -     75513 G------C--AC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48898 4 -     97555 G------C--AC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5622 4 +     30972 G------C--AC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43342 4 -     52037 G------C--AC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59745 4 -    111500 G------C--AC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247538 2 - 206538554 G------C----
i Felis_catus.CM001381.2                                 I 2 C 0
s Felis_catus_fca126.CM031415.1                          185117324 2 - 205367284 G------C----
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28422 2 -     30238 G------C----
i Felis_nigripes.FelNig_flattened_line_31944             I 2 C 0
s Fukomys_damarensis.KN121974.1                            2922702 3 -   3816255 a------g--a-
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126350 4 -    137831 A------C--CC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9895 4 +     22493 A------C--CC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21965 4 -     32986 A------G--AC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1874 4 -     28519 A------C--AC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92162 2 -     95226 A------C----
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 2 C 0
s Glis_glis.GliGli_scaffold_163929                            1547 2 -      6791 a------t----
i Glis_glis.GliGli_scaffold_163929                       N 0 C 0
s Gorilla_beringei.k141_3358147                               6502 4 -      8343 A------C--AC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255517 4 - 186649187 A------C--AC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2673 2 -     78134 A------T----
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15433 4 -     40692 G------C--AC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36835 4 +     49394 G------C--AC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61703 4 -     66874 G------C--AC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10577 4 -     42923 G------C--AC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17576 4 -     53142 G------C--AC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31516 2 -    327341 A------C----
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9836 2 +     48891 A------C----
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 2 C 0
s Heterocephalus_glaber.JH602082.1                         1933113 4 -  22651954 A------G--Ac
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                 954 2 +      8654 C------T----
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8344 2 -     36432 A------C----
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552333 1 -   1711038 -------C----
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1772 2 -      2730 A------C----
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143526 4 -    630532 A------C--AC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70686 2 +     83186 A------C----
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 4 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72574 4 +    143317 G------G--AT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6560 4 +     12352 A------C--AC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13744 4 +     55766 A------C--AC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053344 4 + 191637585 A------C--AC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802222 4 +  11177569 A------C--AC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7862 4 -    135385 A------G--AG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387572 5 +   7955117 a------caca-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3133 4 +     11955 G------C--AC
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10737 2 -     16823 A------C----
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 2 C 0
s Jaculus_jaculus.JH725527.1                               1240829 4 +   9596543 a------A--AT
i Jaculus_jaculus.JH725527.1                             I 120 I 1
s Kogia_breviceps.KogBre_flattened_line_3970                 72577 2 -     97402 A------C----
i Kogia_breviceps.KogBre_flattened_line_3970             I 2 C 0
s Lagothrix_lagothricha.k141_246028                          43962 4 +    110728 A------C--AC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    32873 2 -     49555 A------C----
i Lasiurus_borealis.LasBor_scaffold_26245                I 29 I 8
s Lemur_catta.scaffold_24                                 14760226 4 +  30322482 G------C--AC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4865 4 -     13097 G------C--AC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4619 4 +      5940 G------C--AC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4442 4 -      5717 G------C--AC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10834 4 -     11567 G------C--AC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12215 4 -     12945 G------C--AC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9738 4 +     29618 G------C--AC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9734 4 +     31569 G------C--AC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9744 4 +     24756 G------C--AC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9744 4 +     16388 G------C--AC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814219 2 -   3914936 A------C----
i Leptonychotes_weddellii.KB714746.1                     I 2 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18579 4 +     24238 A------T--AC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341922 2 +    662738 A------C----
i Lipotes_vexillifer.KE559953.1                          I 2 C 0
s Lophocebus_aterrimus.ctg367                               334881 4 -   1826925 A------C--AC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12048 4 +     19643 A------C--AC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045718 4 -   6120653 A------C--AC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085621 2 +  43346337 A------C----
i Loxodonta_africana.GL010049.1                          C 0 I 1
s Lycaon_pictus.CM007581.1                                41615383 2 +  59628241 A------G----
i Lycaon_pictus.CM007581.1                               I 2 C 0
s Macaca_arctoides.k141_1757516                              46270 4 -     61512 A------C--AC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373932 4 -  60120075 A------C--AC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26200 4 +     30207 A------C--AC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1038 4 -      5035 A------C--AC
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26153 4 +     30527 A------C--AC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37329 4 -     50087 A------C--AC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47073 4 +     51645 A------C--AC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416276 4 - 187317192 A------C--AC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400506 4 +  25927173 A------C--AC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49678 4 -     62418 A------C--AC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2209 4 +     14901 A------C--AC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46150 4 +     59329 A------C--AC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272058 4 +    668171 A------C--AC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   696 4 -      5049 A------C--AC
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3856 4 +     17132 A------C--AC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223943 2 -    270270 A------C----
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323346 4 +  24302211 A------C--AC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358177 4 -    752769 A------C--AC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674270 2 -    737560 A------C----
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221568 2 +    317179 a------c----
i Manis_pentadactyla.KN006162.1                          I 2 C 0
s Marmota_marmota.CZRN01000018.1                           7501776 5 +  40650429 a------caca-
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151112 2 +    207569 A------C----
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26936 2 -     74585 A------C----
i Mellivora_capensis.MelCap_flattened_line_19308         I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50895 4 -    140813 A------T--AC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429961 4 +  29670104 G------C--AC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88206 2 +     93471 A------C----
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 2 C 0
s Mico_argentatus.k141_582562                                11001 4 +     17804 G------C--AC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11501 4 -     12984 G------C--AC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19817 4 -     26561 G------C--AC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985576 4 +  93316391 G------C--AC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185800 4 +    200668 ATG----C----
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963156 4 +  27267610 A------C--AC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363954 4 -   8254450 A--CA--C----
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42861 4 -     48117 A--CA--C----
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23380 4 -     27822 A------C--AC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9230 2 +     27589 A------C----
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 2 C 0
s Mirza_zaza.k141_766280                                     53359 4 -     62432 G------C--AC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360311 2 +    437263 A------C----
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180024 4 +    366855 ATG----C----
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26282 2 -     82753 A------C----
i Moschus_moschiferus.MosMos_scaffold_13123              I 2 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19241 2 -     63510 A------C----
i Mungos_mungo.MunMun_flattened_line_18455               I 2 C 0
s Murina_feae.MurFea_scaffold_17764                          39921 4 +     47283 A--CA--C----
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593869 4 + 120012414 A------T--Gc
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688258 4 + 129401213 A------T--AC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497552 4 + 130317789 A------T--GC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84231 2 -     86153 C------T----
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355858 2 +  14710649 A------C----
i Mustela_putorius.JH418006.1                            I 2 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63828 4 +     67721 A------A--AT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794177 4 +  10118263 A----Cac----
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388350 4 +   6019432 A--TA--C----
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384137 4 +   4330536 A--CA--C----
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3171 4 +     18357 A--CA--C----
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120513 2 +    130748 G------T----
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947452 4 +   3037898 A------C--AC
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30036 4 +     34575 A------C--AC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232977 2 -   7148211 A------C----
i Neophocaena_asiaeorientalis.KZ687982.1                 I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128980 1 -    149072 A-----------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54452 4 -    132029 A------C--AC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10547 4 -     16345 A------C--AC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16432 4 +     22201 A------C--AC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414653 4 -  22158432 A------C--AC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26830 4 -     54323 A------C--AC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198979 2 +   9404916 A------G----
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 2 C 0
s Nycticebus_bengalensis.LG01                             93638947 4 + 196305487 A------C--AC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1550 4 -      9413 A------C--AC
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566330 4 - 199412804 A------C--AC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557641 4 -   3988456 A------T--CC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055784 4 -  11899542 A------A--Ac
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452647 2 +   2017862 A------C----
i Odobenus_rosmarus.KB229312.1                           I 2 C 0
s Odocoileus_virginianus.KZ100018.1                         437052 2 -    630418 A------C----
i Odocoileus_virginianus.KZ100018.1                      I 2 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15246 2 +    150152 A------C----
i Okapia_johnstoni.LVCL01S0005463.1                      I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93510 4 -    140218 G------C--AC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Orcinus_orca.KB316932.1                                  8103379 2 +  10937097 A------C----
i Orcinus_orca.KB316932.1                                I 2 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104375 4 - 174332312 A------T--AC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40023 1 +    559221 -------G----
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Otolemur_crassicaudatus.k141_649260                        41498 4 -     51505 A------C--AC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354501 4 +   1103335 A------C--AC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404956 2 -  44047080 A------C----
i Ovis_aries.CM001607.2                                  I 2 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5475 2 +     17875 A------C----
i Ovis_canadensis.OviCan_scaffold_67953                  I 2 C 0
s Pan_troglodytes.CM009242.2                               1473546 4 - 189151597 A------C--AC
i Pan_troglodytes.CM009242.2                             I 19 I 6
s Panthera_onca.PanOnc_flattened_line_3271                   25245 2 -    230217 G------C----
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                              18462571 2 -  18783137 G------C----
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               3973230 2 +   8748460 A------C----
i Panthera_tigris.KE722367.1                             I 2 C 0
s Pantholops_hodgsonii.KE114653.1                          1616484 2 +   2937107 A------C----
i Pantholops_hodgsonii.KE114653.1                        I 2 C 0
s Papio_anubis.CM001495.2                                   244178 4 - 183742232 A------C--AC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10640 4 +     21308 A------C--AC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293213 4 -  20919399 A------C--AC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23288 4 -     27687 A------C--AC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16434 4 +     16796 A------C--AC
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23245 4 -     23640 A------C--AC
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15821 2 +     78924 G------C----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Perodicticus_ibeanus.k141_1921260                          27828 4 +     31479 A------C--AC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20196 4 -     24908 A------C--AC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2627 4 +      9367 C------C--TT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32679 4 -     56120 A------A--CA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4905 2 -     63832 A------C----
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 2 C 0
s Piliocolobus_badius.k141_2704958                            3467 4 +     55023 A------C--AC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3005 4 -     89929 A------C--AC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3595 4 +     40849 A------C--AC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255270 4 +  14605196 A------C--AC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4767 2 +     22231 A------C----
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65585 4 +    207309 A------C--AC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6677 4 -     25401 A------C--AC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32421 4 +     58159 A------C--AC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32697 4 +     63561 A------C--AC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32457 4 +     51148 A------C--AC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557427 4 -   4542175 A------C--AC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32441 4 +     51125 A------C--AC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1922 2 +     19503 A------C----
i Platanista_gangetica.PlaMin_flattened_line_83166       I 2 C 0
s Plecturocebus_bernhardi.k141_2549090                        8859 4 +     39866 A------C--AC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3941 4 -      9282 A------C--AC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43345 4 -     87950 A------C--AC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43739 4 -     88961 A------C--AC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8437 4 -     39403 A------C--AC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43388 4 +     87928 A------C--AC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8436 4 -     60166 A------C--AC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15373 4 -     67232 A------C--AC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43289 4 -     90634 A------C--AC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44756 4 +     89403 A------C--AC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178656 4 - 189387572 A------C--AC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193473 4 -   9816681 A------C--AC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28616 4 +     69807 A------C--AC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45797 4 -     80239 A------C--AC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 4944 2 +      7663 C------T----
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 1
s Prolemur_simus.MPIZ01000396.1                            1983374 4 +   4620579 G------C--AC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566884 4 -   2598838 G------C--AC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4522 4 -      7103 G------C--AC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5119 4 -     11706 G------C--AC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8856 4 -     30655 G------C--AC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35170 4 +     46564 G------C--AC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95449 4 -     98465 G------C--AC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9088 4 +     35169 G------C--AC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38409 4 +     52041 A------C--Ac
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52917 4 -     66298 ATG----C----
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5432 2 -     18639 A------C----
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 2 C 0
s Pteropus_alecto.KB030862.1                               5841515 2 -  28871421 A------c----
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538030 2 -   4952924 A------c----
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099887 2 +  38429054 G------C----
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             27985 4 +     91421 A------C--AC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154469 4 -   7812017 A------C--AC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8842 4 +     72585 A------C--AC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53969 2 +     55069 A------C----
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 2 C 0
s Rattus_norvegicus.chr16                                 37023692 4 -  90668790 A------T--GC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915495 2 +   3329780 A------C----
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2570 4 +      7119 A------C--AC
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123186 4 + 195417433 A------C--AC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237412 4 -   7961872 A------C--AC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76014 2 -    116970 G------C----
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4741 4 +     27962 G------C--AC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4635 4 +      6077 G------C--AC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4725 4 +      5971 G------C--AC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4646 4 +      5932 G------C--AC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2988 4 -      4390 G------C--AC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392425 4 - 209938924 G------C--AC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4594 4 +      5979 G------C--AC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1164 4 -     22275 G------C--AC
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8644 2 +     16473 A------C----
i Saiga_tatarica.SaiTat_scaffold_39512                   I 2 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109761 4 + 121099817 A------C--AT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31328 4 -     47369 A------C--AT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31714 4 -     79414 A------C--AT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28405 4 -     34454 A------C--AT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15806 4 -     22428 A------C--AT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30960 4 -     47109 A------C--AT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239006 4 +   5703754 A------C--AC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8596 4 +     21866 A------C--AC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116657 2 +    313613 A------C----
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26311 4 +     27374 A------C--AC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29823 4 +     58920 A------C--AC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16321 4 -     45317 A------C--AC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23979 4 -     42441 A------C--AC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26657 4 -     29113 A------C--AC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29732 4 -     48123 A------C--AC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864931 2 -   1910179 A------C----
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Sorex_araneus.JH798187.1                                 4672039 2 +  18376816 C------C----
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869150 5 +   3870691 a------caca-
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7521 2 -     97271 A------C----
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 2 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125657 2 +    196729 A------C----
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                    6644710 2 +  69701581 A------C----
i Sus_scrofa.CM000828.4                                  I 2 C 0
s Symphalangus_syndactylus.tarseq_199                       391912 4 +   1523678 A------C--AC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15090 2 +     22964 A------C----
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3504 2 +      5583 G------C----
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192399 2 +    199430 G------C----
i Tapirus_indicus.TapInd_scaffold_7432                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106367 2 -    539355 G------C----
i Tapirus_terrestris.TapTer_scaffold_755                 I 2 C 0
s Tarsius_lariang.k141_1733899                                1430 4 +      9917 A------A--GC
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8228 4 +     20590 A------A--GC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354164 4 - 186847797 A------C--AC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24853 4 -     33621 A------G--AC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20491 2 -     31044 A------T----
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480918 4 -    610378 ATG----C----
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21856 4 +     26378 A------C--AC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34532 4 -     78344 A------C--AC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21181 4 +     25722 A------C--AC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29488 4 -     62838 A------C--AC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29532 4 +     46913 A------C--AC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10341 4 -     28527 A------C--AC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31423 4 -     64340 A------C--AC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29461 4 -     63452 A------C--AC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10908 4 +     22490 A------C--AC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4331 4 -      6147 A------C--AC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11244 4 -     13050 A------C--AC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256474 4 -   6242583 A------C--AC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2502 4 +     19340 A------C--AC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174253 2 -    200418 A------C----
i Tragulus_javanicus.TraJav_scaffold_3462                I 2 C 0
s Trichechus_manatus.JH594705.1                            6482340 1 -  10818551 A-----------
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835154 4 -   4065304 A------C--AC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9174 4 -     70247 A------C--AC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366492 2 -  33153633 A------C----
i Tursiops_truncatus.MRVK01000835.1                      I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4381 2 -     21056 A------C----
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182822 2 +   5085361 A------C----
i Ursus_maritimus.KK499267.1                             I 2 C 0
s Varecia_rubra.k141_787544                                  26030 4 -     30710 G------C--AC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24937 4 -    147434 G------C--AC
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174904 1 -    224448 ----------A-
i Xerus_inauris.XerIna_scaffold_2302                     I 2 C 0
s Vicugna_pacos.KN270157.1                                   77079 2 +   5488506 A------C----
i Vicugna_pacos.KN270157.1                               I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105745 2 -    112863 A------G----
i Vulpes_lagopus.VulLag_flattened_line_12041             I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29855 2 -     86975 A------C----
i Zalophus_californianus.ZalCal_flattened_line_17732     I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       774 4 -      1899 A------A--AC
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1776 2 +      2126 A------C----
i Ziphius_cavirostris.ZipCav_flattened_line_504766       I 2 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Microgale_talazaci.MicTal_scaffold_6613                    47496 0 +    145209 C
e Echinops_telfairi.JH980293.1                            62856261 0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_201229                418 0 +     11607 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922 6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549 6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339 6 -     41509 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6206  6 +     36723 A--A--G--------A------G---A
s Acinonyx_jubatus.LLWD01001279.1                           813631  6 +   1699592 A--G--G--------T------T---A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26005  6 +     63021 T--A--G--------T------C---A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416088  6 +  29979442 A--G--G--------T------T---A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216433  6 +    347723 A--G--A--------T------T---A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    18997  6 -     61208 T--A--G--------T------C---A
i Allactaga_bullata.AllBul_scaffold_20030                I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48851  6 +     53615 A--A--G--------A------G---A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           882  6 +     13857 A--A--G--------A------G---A
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17433  6 -     21945 A--A--G--------A------G---A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19118  6 +     32033 A--A--G--------A------G---A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72952  6 -     84148 A--A--G--------A------G---A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45191  6 -     78289 A--A--G--------A------G---A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44630  6 +     55831 A--A--G--------A------G---A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43080  6 -     64179 A--A--G--------A------G---A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            187  6 -      3959 A--A--G--------A------G---A
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             41705  6 +     45454 A--A--G--------A------G---A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47354  6 +     70886 A--A--G--------A------G---A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9527  6 +     30854 A--A--G--------A------G---A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33661  6 +     42133 A--A--G--------A------G---A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586091  6 +   2318259 A--G--G--------T------C---A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177885  6 -    412891 A--G--A--------T------C---A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51198  6 -     68529 A--G--G--------T------C---A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1918  6 +     17741 G--A--G--------A------G---A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2543  6 -     15923 G--A--G--------A------G---A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672825  6 +   5030052 G--A--G--------A------G---A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2819  6 -     16391 G--A--G--------A------G---A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2378  6 -     17186 G--A--G--------A------G---A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16910  4 -     32367 ------G--------T------C---A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20985  6 -     45910 C--G--G--------T------C---A
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6151  6 -     15198 A--G--A--------T------C---A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275415  6 +  21539123 A--A--G--------A------G---A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11583  6 +     48076 A--A--G--------A------G---A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6718  6 -     28759 A--A--G--------A------G---A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34272  6 +     44353 A--A--G--------A------G---A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49643  6 -     71267 A--A--G--------A------G---A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23701  6 -     33135 A--A--G--------A------G---A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6993  6 +     11645 A--G--A--------T------C---A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7001  6 -     19611 A--G--A--------T------C---A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964230  6 -  23207421 A--G--G--------T------C---A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          730  6 -     25979 A--G--G--------T------C---A
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87099  6 +    124022 A--G--G--------T------C---A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22641  6 +    288883 A--G--G--------T------C---A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357031  6 +  48749331 A--G--G--------T------C---A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755595  6 +   1948126 A--G--G--------T------C---A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545737  6 -  45695690 A--G--G--------T------C---A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530752  6 -   4408762 A--G--G--------T------C---A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8591  6 +     28062 A--A--G--------A------G---A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43885  6 -     91139 A--A--G--------A------G---A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21411  6 +     95584 A--A--G--------A------G---A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21324  6 +    119600 A--A--G--------A------G---A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10898  6 +     18648 A--A--G--------A------G---A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10432  6 -     13885 A--A--G--------A------G---A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2503  6 -      8861 A--A--G--------A------G---A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454895  6 + 189096842 A--A--G--------A------G---A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2418  6 +      8664 A--A--G--------A------G---A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631747  6 +  17673402 A--G--G--------C------C---A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666034  6 +   7040546 A--G--G--------C------C---A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209693  6 +   1652518 A--G--G--------C------C---A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506116  6 +  60362399 A--G--A--------C------T---A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9752  6 -     23171 A--G--A--------C------T---A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223095  6 +   9314153 A--G--A--------C------T---A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616230  6 +  59632846 A--G--A--------C------T---A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107811  6 -  63665305 A--G--A--------C------T---A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409820  6 -  46296322 A--G--G--------T------C---A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592094  6 +  44709034 A--G--G--------T------C---A
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    262  6 -      1607 A--A--G--------T------C---A
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1011  6 +      9923 A--G--A--------T------C---A
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28401  6 -     39886 T--A--G--------T------C---A
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80293  6 -    217609 A--G--A--------T------C---A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997133  6 +  23392119 g--a--a--------t------a---a
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000574  6 +  23407841 g--a--a--------t------a---a
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63655  6 -     66877 G--A--A--------T------A---A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5816  6 -     12580 A--A--G--------A------G---A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43873  6 +     53515 A--A--G--------A------G---A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373636  6 -  26074798 G--A--G--------A------G---A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8690  6 -     34880 G--A--G--------A------G---A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67786  6 -     89041 G--A--G--------A------G---A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492916  6 -  27778364 A--G--G--------T------C---A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19749  6 +     27315 A--G--G--------T------C---A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142000  6 -   4669795 A--A--G--------A------G---A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45744  6 +     47900 A--A--G--------A------G---A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1172  6 -     14410 A--A--G--------A------G---A
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45556  6 -    148725 A--A--G--------A------G---A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27765  6 -     40656 A--A--G--------A------G---A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7729  6 +     20796 A--A--G--------A------G---A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12847  6 -     17524 A--A--G--------A------G---A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28570  6 -     34525 A--A--G--------G------G---A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12350  6 -     25376 A--A--G--------A------G---A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364937  6 -  39242232 A--A--G--------A------G---A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270664  6 +  21565898 A--A--G--------A------G---A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33032  6 -     45857 A--A--G--------A------G---A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27933  6 -     32606 A--A--G--------A------G---A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4095  6 +      8499 A--A--G--------A------G---A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26491  6 +     70610 A--A--G--------A------G---A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23452  6 +     36323 A--A--G--------A------G---A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13414  6 -     19938 G--G--G--------T------C---A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31367  6 -     33796 A--G--G--------T------C---A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5881  6 -     15404 A--G--G--------T------C---A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9698  6 -     32913 A--A--G--------A------G---A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20111  6 -     40346 A--A--G--------A------G---A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20366  6 +    216457 A--A--G--------A------G---A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20159  6 +     39636 A--A--G--------A------G---A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239501  6 -   2543920 a--a--g--------t------t---g
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4747  6 +      5346 A--A--G--------A------G---A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43222  6 -    112038 A--A--G--------G------G---A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8773  6 +     34062 A--A--G--------G------G---A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344353  6 +  18827391 A--A--G--------A------G---A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10897  6 -     44032 A--A--G--------A------G---A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305678  6 - 135778131 A--A--G--------A------G---A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15546  6 +     15858 G--G--G--------T------C---A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607121  6 -    839153 G--G--G--------T------C---A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2249  7 +      2406 ------C-A----GGC------C---A
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          I 1 C 0
s Colobus_angolensis.KN981557.1                             410083  6 -   2368649 A--A--G--------A------G---A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379964  6 - 200372422 A--A--G--------A------G---A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3521  6 -     84244 A--A--G--------A------G---A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807983  8 +  53390261 ttag--t--------t------c---a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3515  1 -      8242 A--------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44908  6 -     83289 C--A--G--------T------C---A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115583  6 - 224834208 T--A--A--------T------T---A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10106  8 +     12657 ATGA--G--------T------C---A
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5076  6 +     87169 A--G--G--------T------T---A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646143  6 -   1526836 A--A--G--------T------C---A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19049  6 +     50838 A--A--G--------T------C---A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 121
s Cuniculus_paca.CunPac_flattened_line_7025                   5058  6 +     36344 A--A--G--------T------A---A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28835  6 +     75252 A--A--G--------T------C---A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110766  6 -   2246927 A--G--G--------T------G---A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293303  6 +  12879189 A--G--G--------T------C---A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632638  6 -  35494412 A--G--G--------T------C---A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866074  6 -  20541912 A--G--A--------T------C---A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665200  6 -   1390856 A--G--G--------T------C---A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139993  6 -    198055 A--G--G--------T------C---A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99583  6 -    115145 A--A--G--------T------T---A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951287 12 -  37912305 A--A--G--------TTTAGTAA---A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6219 12 -     10735 A--A--G--------TTTAGTAA---A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6977  8 +     19438 a--gaag--------t------c---a
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240458  6 -    607251 A--G--G--------T------C---A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226465  7 +  10337057 ------C--T---GGC------T---G
i Elephantulus_edwardii.JH947257.1                       I 1 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31718  6 +    110024 T--A--G--------T------C---A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13689  6 +     18970 T--A--G--------T------C---A
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916839  6 +  41312741 a--g--a--------t------t---a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579620  6 +  14770903 A--G--A--------T------C---A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042121  6 -   4378816 A--G--G--------T------C---A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376059  6 +  39960074 A--G--G--------T------C---A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412041  6 -    498745 A--G--G--------T------C---A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666760  6 +   7059049 A--G--G--------T------C---A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263889  6 +  21539334 A--A--G--------A------G---A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71844  6 -    133382 A--G--G--------T------C---A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              431  6 -      1072 A--G--G--------T------C---A
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15508  6 -     24895 A--G--G--------T------C---A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43218  6 -     70999 A--G--G--------T------C---A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87188  6 +    112731 A--G--G--------T------C---A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43750  6 +     68309 A--G--G--------T------C---A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54075  6 -     65740 A--G--G--------T------C---A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24707  6 -     75513 A--G--G--------T------C---A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48902  6 -     97555 A--G--G--------T------C---A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5626  6 +     30972 A--G--G--------T------C---A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43346  6 -     52037 A--G--G--------T------C---A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59749  6 -    111500 A--G--G--------T------C---A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247540  6 - 206538554 A--G--G--------T------T---A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117326  6 - 205367284 A--G--G--------T------T---A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28424  6 -     30238 A--G--G--------T------T---A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922705  5 -   3816255 ---t--g--------t------c---a
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126354  6 -    137831 A--G--G--------T------C---A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9899  6 +     22493 A--G--G--------T------C---A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21969  6 -     32986 A--G--G--------T------C---A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1878  6 -     28519 A--G--G--------T------C---A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92164  6 -     95226 A--G--G--------T------C---A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            1549  4 -      6791 ------g--------t------c---a
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6506  6 -      8343 A--A--G--------A------G---A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255521  6 - 186649187 A--A--G--------A------G---A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2675  4 -     78134 ------G--------C------C---A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15437  6 -     40692 A--G--G--------T------C---A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36839  6 +     49394 A--G--G--------T------C---A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61707  6 -     66874 A--G--G--------T------C---A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10581  6 -     42923 A--G--G--------T------C---A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17580  6 -     53142 A--G--G--------T------C---A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31518  6 -    327341 A--G--G--------T------T---A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9838  6 +     48891 A--G--G--------T------C---A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933117  6 -  22651954 a--a--g--------t------c---a
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                 957  7 +      8654 ------CG-----GGC------T---A
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8346  6 -     36432 A--G--G--------T------C---A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552334  8 -   1711038 A--CAGA--------T------C---A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1774  8 -      2730 A--CAGA--------T------C---A
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143530  6 -    630532 A--G--G--------A------G---A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70688  6 +     83186 A--G--C--------T------T---A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72578  6 +    143317 G--A--G--------T------A---A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6564  6 +     12352 A--G--G--------A------G---A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13748  6 +     55766 A--G--G--------A------G---A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053348  6 + 191637585 A--G--G--------A------G---A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802226  6 +  11177569 A--G--G--------A------G---A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7866  6 -    135385 G--A--G--------T------C---A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387577  4 +   7955117 ------g--------t------c---a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3137  6 +     11955 A--G--G--------T------C---A
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10739  6 -     16823 A--G--G--------T------C---A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240834  6 +   9596543 T--A--G--------T------C---A
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72579  6 -     97402 A--G--G--------T------C---A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43966  6 +    110728 A--A--G--------A------G---A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63601  6 -     65777 G--G--G--------T------C---A
i Lasiurus_borealis.LasBor_scaffold_16567                I 2 C 0
s Lemur_catta.scaffold_24                                 14760230  6 +  30322482 A--G--G--------T------C---A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4869  6 -     13097 A--A--G--------A------G---A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4623  6 +      5940 A--A--G--------A------G---A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4446  6 -      5717 A--A--G--------A------G---A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10838  6 -     11567 A--A--G--------A------G---A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12219  6 -     12945 A--A--G--------A------G---A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9742  6 +     29618 A--G--G--------T------C---A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9738  6 +     31569 A--G--G--------T------C---A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9748  6 +     24756 A--G--G--------T------C---A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9748  6 +     16388 A--G--G--------T------C---A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814221  6 -   3914936 A--G--G--------T------T---A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18583  6 +     24238 A--G--G--------T------T---A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341924  6 +    662738 A--G--G--------T------C---A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334885  6 -   1826925 A--A--G--------A------G---A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12052  6 +     19643 A--G--G--------T------C---A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045722  6 -   6120653 A--G--G--------T------C---A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085624  7 +  43346337 ------TG-----GGC------C---A
i Loxodonta_africana.GL010049.1                          I 1 C 0
s Lycaon_pictus.CM007581.1                                41615385  6 +  59628241 A--G--A--------C------T---A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46274  6 -     61512 A--A--G--------A------G---A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373936  6 -  60120075 A--A--G--------A------G---A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26204  6 +     30207 A--A--G--------A------G---A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1042  6 -      5035 A--A--G--------A------G---A
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26157  6 +     30527 A--A--G--------A------G---A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37333  6 -     50087 A--A--G--------A------G---A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47077  6 +     51645 A--A--G--------A------G---A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416280  6 - 187317192 A--A--G--------A------G---A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400510  6 +  25927173 A--A--G--------A------G---A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49682  6 -     62418 A--A--G--------A------G---A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2213  6 +     14901 A--A--G--------A------G---A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46154  6 +     59329 A--A--G--------A------G---A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272062  6 +    668171 A--A--G--------A------G---A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   700  6 -      5049 A--A--G--------A------G---A
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3860  6 +     17132 A--A--G--------A------G---A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223945  8 -    270270 A--GAAT--------T------C---A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323350  6 +  24302211 A--A--G--------A------G---A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358181  6 -    752769 A--A--G--------A------G---A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674272  6 -    737560 A--G--T--------T------G---G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221570  6 +    317179 a--g--t--------t------t---g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501781  4 +  40650429 ------g--------t------c---a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151114  8 +    207569 A--CAGA--------T------C---A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26938  6 -     74585 A--G--G--------T------T---A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50899  6 -    140813 C--A--A--------T------T---T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17429965  6 +  29670104 T--C--G--------T------T---A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88208  6 +     93471 A--G--G--------T------C---A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11005  6 +     17804 A--A--G--------A------G---A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11505  6 -     12984 A--A--G--------A------G---A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19821  6 -     26561 A--A--G--------A------G---A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985580  6 +  93316391 A--G--G--------T------C---A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185804  6 +    200668 A--G--A--------T------C---A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963160  6 +  27267610 T--A--G--------T------C---A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363958  6 -   8254450 G--G--A--------T------C---A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42865  6 -     48117 G--G--A--------T------C---A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23384  6 -     27822 A--A--G--------A------G---A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9232  6 +     27589 A--G--G--------T------T---A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53363  6 -     62432 A--G--G--------T------C---A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360313  6 +    437263 A--G--G--------T------C---A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180028  6 +    366855 A--G--A--------T------C---A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26284  6 -     82753 A--G--G--------T------C---A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19243  6 -     63510 A--G--G--------T------T---A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39925  6 +     47283 A--G--A--------T------C---A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35593873  6 + 120012414 t--a--g--------t------t---a
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688262  6 + 129401213 T--A--G--------T------T---A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497556  6 + 130317789 T--A--G--------T------T---A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84233  4 -     86153 ------G--------T------C---A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355860  6 +  14710649 A--G--C--------T------T---A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63832  8 +     67721 TTTG--C--------T------C---A
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794181  6 +  10118263 a--g--a--------t------c---a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388354  6 +   6019432 A--G--A--------T------C---A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384141  6 +   4330536 A--G--A--------T------C---A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3175  6 +     18357 A--G--A--------T------C---A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120515  6 +    130748 G--G--G--------T------C---A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947456  6 +   3037898 T--A--G--------T------C---A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30040  6 +     34575 A--A--G--------A------G---A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232979  6 -   7148211 A--G--G--------T------C---A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nomascus_annamensis.k141_1771965                           54456  6 -    132029 A--G--G--------A------G---A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10551  6 -     16345 A--G--G--------A------G---A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16436  6 +     22201 A--G--G--------A------G---A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414657  6 -  22158432 A--G--G--------A------G---A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26834  6 -     54323 A--G--G--------A------G---A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198981  6 +   9404916 A--G--A--------C------T---A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638951  6 + 196305487 A--G--G--------T------C---A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1554  6 -      9413 A--G--G--------T------C---A
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566334  6 - 199412804 A--G--G--------T------C---A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557645  6 -   3988456 A--G--G--------T------C---A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055788  6 -  11899542 a--a--g--------t------c---a
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452649  6 +   2017862 A--G--G--------T------T---A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437054  6 -    630418 A--G--G--------T------C---A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15248  6 +    150152 A--G--G--------T------C---A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93514  6 -    140218 A--A--G--------T------C---A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Orcinus_orca.KB316932.1                                  8103381  6 +  10937097 A--G--G--------T------C---A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104379  6 - 174332312 A--G--G--------T------T---A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40024  6 +    559221 A--G--A--------C------T---A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41502  6 -     51505 A--G--G--------T------C---A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354505  6 +   1103335 A--G--G--------T------C---A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404958  6 -  44047080 A--G--G--------T------C---A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5477  6 +     17875 A--G--G--------T------C---A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             13211 14 -     26668 A--A--GGATTTAGAA------C---A
i Pan_troglodytes.NBAG03003091.1                         I 4 I 139
s Panthera_onca.PanOnc_flattened_line_3271                   25247  6 -    230217 A--G--G--------T------T---A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462573  6 -  18783137 A--G--G--------T------T---A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973232  6 +   8748460 A--G--G--------T------T---A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616486  6 +   2937107 A--G--G--------T------C---A
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244182  6 - 183742232 A--A--G--------A------G---A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10644  6 +     21308 A--A--G--------A------G---A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293217  6 -  20919399 A--A--G--------A------G---A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23292  6 -     27687 A--A--G--------A------G---A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16438  6 +     16796 A--A--G--------A------G---A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23249  6 -     23640 A--A--G--------A------G---A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15823  6 +     78924 A--G--G--------T------T---A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27832  6 +     31479 A--G--G--------T------C---A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20200  6 -     24908 A--G--G--------T------C---A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2631 12 +      9367 A--A--G--------GATAGTAG---A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32683  6 -     56120 A--A--G--------T------C---A
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4907  6 -     63832 A--G--G--------T------C---A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3471  6 +     55023 A--A--G--------A------G---A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3009  6 -     89929 A--A--G--------A------G---A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3599  6 +     40849 A--A--G--------A------G---A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255274  6 +  14605196 A--A--G--------A------G---A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4769  6 +     22231 A--C--T--------T------C---A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65589  6 +    207309 A--A--A--------A------G---A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6681  6 -     25401 A--A--A--------A------G---A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32425  6 +     58159 A--A--A--------A------G---A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32701  6 +     63561 A--A--A--------A------G---A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32461  6 +     51148 A--A--A--------A------G---A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557431  6 -   4542175 A--A--A--------A------G---A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32445  6 +     51125 A--A--A--------A------G---A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1924  6 +     19503 A--G--G--------T------C---A
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8863  6 +     39866 A--A--G--------A------G---A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3945  6 -      9282 A--A--G--------A------G---A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43349  6 -     87950 A--A--G--------A------G---A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43743  6 -     88961 A--A--G--------A------G---A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8441  6 -     39403 A--A--G--------A------G---A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43392  6 +     87928 A--A--G--------A------G---A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8440  6 -     60166 A--A--G--------A------G---A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15377  6 -     67232 A--A--G--------A------G---A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43293  6 -     90634 A--A--G--------A------G---A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44760  6 +     89403 A--A--G--------A------G---A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178660  6 - 189387572 A--A--G--------A------G---A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193477  6 -   9816681 A--A--G--------A------G---A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28620  6 +     69807 A--A--G--------A------G---A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45801  6 -     80239 A--A--G--------A------G---A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 4947  7 +      7663 ------CG-----GGC------C---A
i Procavia_capensis.ProCapCap_scaffold_165387            I 1 C 0
s Prolemur_simus.MPIZ01000396.1                            1983378  6 +   4620579 A--G--G--------T------C---A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566888  6 -   2598838 A--G--G--------T------C---A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4526  6 -      7103 A--G--G--------T------C---A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5123  6 -     11706 A--G--G--------T------C---A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8860  6 -     30655 A--G--G--------T------C---A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35174  6 +     46564 A--G--G--------T------C---A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95453  6 -     98465 A--G--G--------T------C---A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9092  6 +     35169 A--G--G--------T------C---A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38413  6 +     52041 a--a--a--------t------t---t
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52921  6 -     66298 A--G--G--------T------C---A
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5434  6 -     18639 A--G--G--------T------T---A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841517  8 -  28871421 a--gaag--------t------c---a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538032  8 -   4952924 a--gaag--------t------c---a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099889  6 +  38429054 A--G--G--------T------T---A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27989  6 +     91421 A--A--G--------A------G---A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154473  6 -   7812017 A--A--G--------A------G---A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8846  6 +     72585 A--A--G--------A------G---A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53971  6 +     55069 A--G--G--------T------C---A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023696  6 -  90668790 T--A--G--------C------T---A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915497  8 +   3329780 A--CATA--------T------C---A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2574  6 +      7119 A--A--G--------A------G---A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123190  6 + 195417433 A--A--G--------A------G---A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237416  6 -   7961872 A--A--G--------A------G---A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76016  8 -    116970 A--GAAG--------T------C---A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4745  6 +     27962 A--A--G--------A------G---A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4639  6 +      6077 A--A--G--------A------G---A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4729  6 +      5971 A--A--G--------A------G---A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4650  6 +      5932 A--A--G--------A------G---A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2992  6 -      4390 A--A--G--------A------G---A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392429  6 - 209938924 A--A--G--------A------G---A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4598  6 +      5979 A--A--G--------A------G---A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1168  6 -     22275 A--A--G--------A------G---A
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8646  6 +     16473 A--G--G--------T------C---A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109765  6 + 121099817 G--A--G--------A------G---A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31332  6 -     47369 G--A--G--------A------G---A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31718  6 -     79414 G--A--G--------A------G---A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28409  6 -     34454 G--A--G--------A------G---A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15810  6 -     22428 G--A--G--------A------G---A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30964  6 -     47109 G--A--G--------A------G---A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239010  6 +   5703754 G--A--G--------A------G---A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8600  6 +     21866 G--A--G--------A------G---A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116659  8 +    313613 ATAC--T--------T------C---A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26315  6 +     27374 A--A--G--------A------G---A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29827  6 +     58920 A--A--G--------A------G---A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16325  6 -     45317 A--A--G--------A------G---A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23983  6 -     42441 A--A--G--------A------G---A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26661  6 -     29113 A--A--G--------A------G---A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29736  6 -     48123 A--A--G--------A------G---A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864934  4 -   1910179 ------T--------T------C---A
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Sorex_araneus.JH798187.1                                 4672041  6 +  18376816 A--G--G--------T------C---A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869155  4 +   3870691 ------g--------t------c---a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7523  6 -     97271 A--G--G--------T------T---A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125659  6 +    196729 A--G--G--------T------T---A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644712  6 +  69701581 A--G--A--------T------C---A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391916  6 +   1523678 A--G--G--------A------G---A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15092  6 +     22964 A--G--A--------T------C---G
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3506  6 +      5583 G--G--G--------T------C---A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192401  6 +    199430 A--G--G--------T------C---A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106369  6 -    539355 A--G--G--------T------C---A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Theropithecus_gelada.CM009954.1                           354168  6 - 186847797 A--A--G--------A------G---A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24857  6 -     33621 A--A--G--------T------C---A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20493  6 -     31044 G--G--A--------T------C---A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480922  6 -    610378 A--G--A--------T------C---A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21860  6 +     26378 A--A--G--------A------G---A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34536  6 -     78344 A--A--G--------A------G---A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21185  6 +     25722 A--A--G--------A------G---A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29492  6 -     62838 A--A--G--------A------G---A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29536  6 +     46913 A--A--G--------A------G---A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10345  6 -     28527 A--A--G--------A------G---A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31427  6 -     64340 A--A--G--------A------G---A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29465  6 -     63452 A--A--G--------A------G---A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10912  6 +     22490 A--A--G--------A------G---A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4335  6 -      6147 A--A--G--------A------G---A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11248  6 -     13050 A--A--G--------A------G---A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256478  6 -   6242583 A--A--G--------A------G---A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2506  6 +     19340 A--A--G--------A------G---A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174255  6 -    200418 A--G--G--------C------C---A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835158  6 -   4065304 A--G--G--------C------C---G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9178  6 -     70247 A--A--G--------C------C---A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366494  6 -  33153633 A--G--G--------T------C---A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4383  8 -     21056 ATAG--G--------T------C---A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182824  6 +   5085361 A--G--G--------T------T---A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26034  6 -     30710 A--G--G--------T------C---A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24941  6 -    147434 A--G--G--------T------C---A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77081  6 +   5488506 A--G--G--------C------C---A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105747  6 -    112863 A--G--A--------C------T---A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174905  7 -    224448 ------G--------T------TGTTT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29857  6 -     86975 A--G--G--------T------T---A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       779  6 -      1899 T--A--G--------T------C---A
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1778  6 +      2126 A--G--G--------T------C---A
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Microgale_talazaci.MicTal_scaffold_6613                    47496  0 +    145209 C
e Echinops_telfairi.JH980293.1                            62856261  0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_201229                418  0 +     11607 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Trichechus_manatus.JH594705.1                            6482341  0 -  10818551 C
e Tarsius_wallacei.k141_226975                                8232  0 +     20590 C
e Tarsius_lariang.k141_1733899                                1434  0 +      9917 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922  6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549  6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339  6 -     41509 I
e Noctilio_leporinus.NocLep_scaffold_7894                   128981  0 -    149072 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Cephalopachus_bancanus.k141_1689090                         3162  0 -      5494 C
e Carlito_syrichta.NW_007259797.1                           271202  0 +    496798 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6212 5 +     36723 CATA-T
s Acinonyx_jubatus.LLWD01001279.1                           813637 2 +   1699592 T----T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26011 2 +     63021 C----T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416094 2 +  29979442 T----T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216439 1 +    347723 T-----
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19003 2 -     61208 T----T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48857 5 +     53615 CATA-T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           888 5 +     13857 CATA-T
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17439 5 -     21945 CATA-T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19124 5 +     32033 CATA-T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72958 3 -     84148 CAT---
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45197 3 -     78289 CAT---
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44636 3 +     55831 CAT---
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43086 3 -     64179 CAT---
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            193 3 -      3959 CAT---
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             41711 3 +     45454 CAT---
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47360 3 +     70886 CAT---
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9533 3 +     30854 CAT---
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33667 3 +     42133 CAT---
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586097 2 +   2318259 T----T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177891 2 -    412891 T----T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51204 2 -     68529 T----T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1924 4 +     17741 CAT--C
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2549 4 -     15923 CAT--C
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672831 4 +   5030052 CAT--C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2825 4 -     16391 CAT--C
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2384 4 -     17186 CAT--C
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16914 2 -     32367 T----T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20991 2 -     45910 T----T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6157 2 -     15198 T----T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275421 5 +  21539123 CAT-AT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11589 5 +     48076 CAT-AT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6724 5 -     28759 CAT-AC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34278 5 +     44353 CAT-AT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49649 5 -     71267 CAT-AT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23707 5 -     33135 CAT-AC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  6999 2 +     11645 T----T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7007 2 -     19611 T----T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964236 2 -  23207421 T----T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          736 2 -     25979 T----T
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87105 2 +    124022 T----T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22647 2 +    288883 T----T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357037 2 +  48749331 T----T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755601 2 +   1948126 T----T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545743 2 -  45695690 T----T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530758 2 -   4408762 T----T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8597 5 +     28062 CATA-T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43891 5 -     91139 CATA-T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21417 5 +     95584 CATA-T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21330 5 +    119600 CATA-T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10904 4 +     18648 CGT--A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10438 4 -     13885 CGT--G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2509 4 -      8861 CGT--A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454901 4 + 189096842 CGT--A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2424 4 +      8664 CGT--A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631753 2 +  17673402 T----T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666040 2 +   7040546 T----T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209699 2 +   1652518 T----T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506122 2 +  60362399 T----T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9758 2 -     23171 T----T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223101 2 +   9314153 T----T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616236 2 +  59632846 T----T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107817 2 -  63665305 T----T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409826 2 -  46296322 T----T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592100 2 +  44709034 T----T
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    268 2 -      1607 T----T
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271202 3 +    496798 --CA-T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1017 2 +      9923 T----T
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28407 2 -     39886 T----T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80299 2 -    217609 T----T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997139 2 +  23392119 t----t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000580 2 +  23407841 t----t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63661 2 -     66877 T----T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5822 4 -     12580 CGT--A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43879 4 +     53515 CGT--A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373642 4 -  26074798 CGT--A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8696 4 -     34880 CGT--A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67792 4 -     89041 CGT--A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3162 3 -      5494 --CA-T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492922 2 -  27778364 T----T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19755 2 +     27315 T----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142006 5 -   4669795 CATA-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45750 5 +     47900 CATA-T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1178 5 -     14410 CATA-T
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45562 5 -    148725 CATA-T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27771 5 -     40656 CATA-T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7735 5 +     20796 CATA-T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12853 5 -     17524 CATA-T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28576 5 -     34525 CATA-T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12356 5 -     25376 CATA-T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364943 5 -  39242232 CATA-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270670 5 +  21565898 CATA-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33038 5 -     45857 CATA-T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27939 5 -     32606 CATA-T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4101 5 +      8499 CATA-T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26497 5 +     70610 CATA-T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23458 5 +     36323 CATG-T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13420 2 -     19938 T----T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31373 2 -     33796 C----T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5887 2 -     15404 T----T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9704 5 -     32913 CATA-T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20117 5 -     40346 CATA-T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20372 5 +    216457 CATA-T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20165 5 +     39636 CATA-T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239507 2 -   2543920 t----t
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4753 5 +      5346 CGTG-T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43228 5 -    112038 CATA-T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8779 5 +     34062 CATA-T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344359 5 +  18827391 CATA-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10903 3 -     44032 CAT---
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305684 5 - 135778131 CATA-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15552 2 +     15858 T----T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607127 2 -    839153 T----T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2256 2 +      2406 T----T
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             410089 5 -   2368649 CATA-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379970 5 - 200372422 CATA-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3527 5 -     84244 CATA-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807991 2 +  53390261 t----t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44914 2 -     83289 C----G
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115589 2 - 224834208 C----T
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_77846              10114 2 +     12657 T----T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5082 2 +     87169 T----T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646149 2 -   1526836 T----T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19176 2 +     50838 t----t
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 121 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5064 2 +     36344 T----T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28841 2 +     75252 T----T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110772 2 -   2246927 T----T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293309 2 +  12879189 T----T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632644 2 -  35494412 T----T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866080 2 -  20541912 T----T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665206 2 -   1390856 T----T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  139999 2 -    198055 T----T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99589 2 -    115145 T----T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951299 2 -  37912305 T----T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6231 2 -     10735 T----T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6985 2 +     19438 t----t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240464 2 -    607251 T----T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226472 2 +  10337057 G----T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31724 2 +    110024 C----T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01026522.1                           13695 2 +     18970 C----T
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               24916845 2 +  41312741 t----t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579626 2 +  14770903 T----T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042127 2 -   4378816 T----T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376065 2 +  39960074 T----T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412047 2 -    498745 T----T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666766 2 +   7059049 C----T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263895 5 +  21539334 CATA-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71850 2 -    133382 T----T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              437 2 -      1072 T----T
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15514 2 -     24895 T----T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43224 2 -     70999 T----T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87194 2 +    112731 T----T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43756 2 +     68309 T----T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54081 2 -     65740 T----T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24713 2 -     75513 T----T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48908 2 -     97555 T----T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5632 2 +     30972 T----T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43352 2 -     52037 T----T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59755 2 -    111500 T----T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247546 2 - 206538554 T----T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117332 2 - 205367284 T----T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28430 2 -     30238 T----T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922710 2 -   3816255 t----t
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126360 2 -    137831 T----T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9905 2 +     22493 T----T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21975 2 -     32986 T----T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1884 2 -     28519 T----T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92170 2 -     95226 T----T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            1553 2 -      6791 t----t
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6512 5 -      8343 CATA-T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255527 5 - 186649187 CATA-T
i Gorilla_gorilla.LT578341.1                             C 0 I 45
s Graphiurus_murinus.GraMur_scaffold_10447                    2679 2 -     78134 T----T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15443 2 -     40692 T----T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36845 2 +     49394 T----T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61713 2 -     66874 T----T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10587 2 -     42923 T----T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17586 2 -     53142 T----T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31524 2 -    327341 T----T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9844 2 +     48891 T----T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933123 2 -  22651954 t----t
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                 964 2 +      8654 T----T
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8352 2 -     36432 T----T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552342 2 -   1711038 T----T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1782 2 -      2730 T----T
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143536 5 -    630532 CGTA-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70694 2 +     83186 T----T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72584 2 +    143317 T----T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6570 5 +     12352 CGTA-T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13754 5 +     55766 CGTA-T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053354 5 + 191637585 CGTA-T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802232 5 +  11177569 CGTA-T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7872 2 -    135385 T----T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387581 2 +   7955117 t----t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3143 2 +     11955 T----T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10745 2 -     16823 T----T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240840 2 +   9596543 T----T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72585 2 -     97402 T----T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43972 5 +    110728 CAT-AT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63607 2 -     65777 T----T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 37
s Lemur_catta.scaffold_24                                 14760236 2 +  30322482 T----T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4875 4 -     13097 CGT--G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4629 4 +      5940 CGT--G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4452 4 -      5717 CGT--G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10844 4 -     11567 CGT--A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12225 4 -     12945 CGT--A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9748 2 +     29618 T----T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9744 2 +     31569 T----T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9754 2 +     24756 T----T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9754 2 +     16388 T----T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814227 2 -   3914936 T----T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18589 2 +     24238 T----T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341930 2 +    662738 T----T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334891 5 -   1826925 CATA-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12058 2 +     19643 T----T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045728 2 -   6120653 T----T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085631 2 +  43346337 T----T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615391 2 +  59628241 T----T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46280 5 -     61512 CATA-T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373942 5 -  60120075 CATA-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26210 5 +     30207 CATA-T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1048 5 -      5035 CATA-T
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26163 5 +     30527 CATA-T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37339 5 -     50087 CATA-T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47083 5 +     51645 CATA-T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416286 5 - 187317192 CATA-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400516 5 +  25927173 CATA-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49688 5 -     62418 CATA-T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2219 5 +     14901 CATA-T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46160 5 +     59329 CATA-T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272068 5 +    668171 CATA-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   706 5 -      5049 CATA-T
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3866 5 +     17132 CATA-T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223953 2 -    270270 T----T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323356 5 +  24302211 CATA-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358187 5 -    752769 CATA-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674278 2 -    737560 T----T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221576 2 +    317179 t----t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501785 2 +  40650429 t----t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151122 2 +    207569 T----T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26944 2 -     74585 T----T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50905 2 -    140813 C----C
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 1
s Mesocricetus_auratus.KB708134.1                         17429971 2 +  29670104 C----T
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_6114                     88214 2 +     93471 T----T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11011 4 +     17804 CGT--A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11511 4 -     12984 CGT--A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19827 4 -     26561 CAT--A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985586 2 +  93316391 T----T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185810 2 +    200668 C----T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963166 2 +  27267610 C----T
i Microtus_ochrogaster.CM001695.1                        C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    6363964 2 -   8254450 T----T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42871 2 -     48117 T----T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23390 5 -     27822 CATA-T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9238 2 +     27589 T----T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53369 2 -     62432 T----T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360319 2 +    437263 T----T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180034 2 +    366855 T----T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26290 2 -     82753 T----T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19249 2 -     63510 T----T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39931 2 +     47283 T----T
i Murina_feae.MurFea_scaffold_17764                      C 0 I 2
s Mus_caroli.LT608237.1                                   35593879 2 + 120012414 c----t
i Mus_caroli.LT608237.1                                  C 0 I 1164
s Mus_musculus.chr8                                       41688268 2 + 129401213 C----T
i Mus_musculus.chr8                                      C 0 I 1
s Mus_spretus.CM004101.1                                  39497562 2 + 130317789 C----T
i Mus_spretus.CM004101.1                                 C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_12866             84237 2 -     86153 T----T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355866 2 +  14710649 T----T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63840 2 +     67721 T----T
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794187 2 +  10118263 t----t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388360 2 +   6019432 T----T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384147 2 +   4330536 T----T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3181 2 +     18357 T----T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120521 2 +    130748 T----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947462 2 +   3037898 C----T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30046 5 +     34575 CATA-T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232985 2 -   7148211 T----T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nomascus_annamensis.k141_1771965                           54462 5 -    132029 CGTA-T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10557 5 -     16345 CGTA-T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16442 5 +     22201 CGTA-T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414663 5 -  22158432 CGTA-T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26840 5 -     54323 CGTA-T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198987 2 +   9404916 T----T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638957 2 + 196305487 T----T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1560 2 -      9413 T----T
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566340 2 - 199412804 T----T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557651 2 -   3988456 T----T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055794 2 -  11899542 t----t
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452655 2 +   2017862 T----T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437060 2 -    630418 T----T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15254 2 +    150152 T----T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93520 2 -    140218 C----T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 1
s Orcinus_orca.KB316932.1                                  8103387 2 +  10937097 T----T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104385 2 - 174332312 T----T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40030 2 +    559221 T----T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41508 2 -     51505 T----T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354511 2 +   1103335 T----T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404964 2 -  44047080 T----T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5483 2 +     17875 T----T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473556 5 - 189151597 CATA-T
i Pan_troglodytes.CM009242.2                             I 6 I 38
s Panthera_onca.PanOnc_flattened_line_3271                   25253 2 -    230217 T----T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462579 2 -  18783137 T----T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973238 2 +   8748460 T----T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616492 2 +   2937107 T----T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244188 5 - 183742232 CATA-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10650 5 +     21308 CATA-T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293223 5 -  20919399 CATA-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23298 5 -     27687 CATA-T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16444 5 +     16796 CATA-T
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23255 5 -     23640 CATA-T
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15829 2 +     78924 T----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27838 2 +     31479 T----T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20206 2 -     24908 T----T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2643 2 +      9367 T----T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32689 2 -     56120 T----T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4913 2 -     63832 T----T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3477 5 +     55023 CATA-T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3015 5 -     89929 CATA-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3605 5 +     40849 CATA-T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255280 5 +  14605196 CATA-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4775 2 +     22231 T----T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65595 5 +    207309 CATA-T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6687 5 -     25401 CATA-T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32431 5 +     58159 CATA-T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32707 5 +     63561 CATA-T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32467 5 +     51148 CATA-T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557437 5 -   4542175 CATA-T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32451 5 +     51125 CATA-T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1930 2 +     19503 T----T
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8869 5 +     39866 CATA-T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3951 5 -      9282 CATA-T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43355 5 -     87950 CATA-T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43749 5 -     88961 CATA-T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8447 5 -     39403 CATA-T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43398 5 +     87928 CATA-T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8446 5 -     60166 CATA-T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15383 5 -     67232 CATA-T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43299 5 -     90634 CATA-T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44766 5 +     89403 CATA-T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178666 5 - 189387572 CATA-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193483 5 -   9816681 CATA-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28626 5 +     69807 CATA-T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45807 5 -     80239 CATA-T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 4954 2 +      7663 T----T
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983384 2 +   4620579 T----T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566894 2 -   2598838 T----T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4532 2 -      7103 T----T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5129 2 -     11706 T----T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8866 2 -     30655 T----T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35180 2 +     46564 T----T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95459 2 -     98465 T----T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9098 2 +     35169 T----T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38419 2 +     52041 c----t
i Psammomys_obesus.NESX01036366.1                        C 0 I 1
s Pteronotus_parnellii.KE847780.1                            52927 2 -     66298 T----T
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5440 2 -     18639 T----T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841525 2 -  28871421 t----t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538040 2 -   4952924 t----t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099895 2 +  38429054 T----T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             27995 5 +     91421 CATA-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154479 5 -   7812017 CATA-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8852 5 +     72585 CATA-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53977 2 +     55069 T----T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023702 2 -  90668790 C----T
i Rattus_norvegicus.chr16                                C 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                       2915505 2 +   3329780 T----T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2580 5 +      7119 CATA-T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123196 5 + 195417433 CATA-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237422 5 -   7961872 CATA-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76024 2 -    116970 T----T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4751 4 +     27962 CGT--G
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4645 4 +      6077 CGT--G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4735 4 +      5971 CGT--G
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4656 4 +      5932 CGT--G
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              2998 4 -      4390 CGT--G
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392435 4 - 209938924 CGT--G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4604 4 +      5979 CGT--G
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1174 4 -     22275 CGT--G
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8652 2 +     16473 T----T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109771 4 + 121099817 GGT--A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31338 4 -     47369 GGT--A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31724 4 -     79414 GGT--A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28415 4 -     34454 GGT--A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15816 4 -     22428 GGT--A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30970 4 -     47109 GGT--A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239016 4 +   5703754 CGT--A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8606 4 +     21866 CGT--A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116667 2 +    313613 T----T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26321 5 +     27374 CACA-T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29833 5 +     58920 CACA-T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16331 5 -     45317 CACA-T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23989 5 -     42441 CACA-T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26667 5 -     29113 CACA-T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29742 5 -     48123 CACA-T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864938 2 -   1910179 C----T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672047 2 +  18376816 T----T
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869159 2 +   3870691 t----t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7529 2 -     97271 T----T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125665 2 +    196729 T----T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644718 2 +  69701581 T----T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391922 5 +   1523678 CATA-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15098 2 +     22964 T----T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3512 2 +      5583 T----T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192407 2 +    199430 T----T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106375 2 -    539355 T----T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1434 3 +      9917 --CG-T
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8232 3 +     20590 --CA-T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354174 5 - 186847797 CATA-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24863 2 -     33621 T----T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20499 2 -     31044 T----T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480928 2 -    610378 T----T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21866 5 +     26378 CACA-T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34542 5 -     78344 CACA-T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21191 5 +     25722 CACA-T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29498 5 -     62838 CACA-T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29542 5 +     46913 CACA-T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10351 5 -     28527 CACA-T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31433 5 -     64340 CACA-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29471 5 -     63452 CACA-T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10918 5 +     22490 CACA-T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4341 5 -      6147 CACA-T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11254 5 -     13050 CACA-T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256484 5 -   6242583 CACA-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2512 5 +     19340 CACA-T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174261 2 -    200418 T----T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835164 2 -   4065304 T----T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9184 2 -     70247 T----T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366500 2 -  33153633 T----T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4391 2 -     21056 T----G
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182830 2 +   5085361 T----T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26040 2 -     30710 T----T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24947 2 -    147434 T----T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77087 2 +   5488506 T----T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105753 2 -    112863 T----T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174912 2 -    224448 T----T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29863 2 -     86975 T----T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       785 2 -      1899 T----T
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1784 2 +      2126 T----T
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Microgale_talazaci.MicTal_scaffold_6613                    47496 0 +    145209 C
e Echinops_telfairi.JH980293.1                            62856261 0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_201229                418 0 +     11607 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Trichechus_manatus.JH594705.1                            6482341 0 -  10818551 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922 6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549 6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339 6 -     41509 I
e Noctilio_leporinus.NocLep_scaffold_7894                   128981 0 -    149072 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          3516 0 -      8242 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6217 38 +     36723 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTTT----CT-----GC-CTTTG
s Acinonyx_jubatus.LLWD01001279.1                           813639 34 +   1699592 TTC---A------TTTAGGAGAC-------------AGAACAGTTCA----CT-----AG-CCTTG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26014 35 +     63021 T-C---A------TTTC--ACTTAT---------TCAGCACAACCCA----TG-----GCCCTTC-
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416096 37 +  29979442 -TC---A------CTTAGGGGACAT---------TCTTAGCAGTTCA----CC-----AG-CTTTG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216440 33 +    347723 --------------TTAGGAGACAT---------TCAGAGCAGTTCA----CC-----AG-CTTTG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19005 38 -     61208 CTT---A------TGTAAGAGAGAC---------TTAGAACAATTCA----CT-----TC-CTTTG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48862 38 +     53615 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           893 38 +     13857 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17444 38 -     21945 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19129 38 +     32033 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72961 38 -     84148 TTG---A------TTTAGGAGACAT---------TCAGGGCGGTTCT----CT-----GC-CTTTG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45200 38 -     78289 TTG---A------TTTAGGAGACAT---------TCAGGGCGGTTCT----CT-----GC-CTTTG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44639 38 +     55831 TTG---A------TTTAGGAGACAT---------TCAGGGCGGTTCT----CT-----GC-CTTTG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43089 38 -     64179 TTG---A------TTTAGGAGACAT---------TCAGGGCGGTTCT----CT-----GC-CTTTG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            196 38 -      3959 TTG---A------TTTAGGAGACAT---------TCAGGGCGGTTCT----CT-----GC-CTTTG
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             41714 38 +     45454 TTG---A------TTTAGGAGACAT---------TCAGGGCGGTTCT----CT-----GC-CTTTG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47363 38 +     70886 TTG---A------TTTAGGAGACAT---------TCAGGGCGGTTCT----CT-----GC-CTTTG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9536 38 +     30854 TTG---A------TTTAGGAGACAT---------TCAGGGCGGTTCT----CT-----GC-CTTTG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33670 38 +     42133 TTG---A------TTTAGGAGACAT---------TCAGGGCGGTTCT----CT-----GC-CTTTG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586099 38 +   2318259 TTT---A------TTTAGGAGACAT---------ACCAAGCAGTTCA----CT-----GC-CTTTG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177893 31 -    412891 TTC---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 7
s Antilocapra_americana.AntAmePen_scaffold_21030             51206 38 -     68529 TTT---A------TTTAGGAGACAT---------ACTGAGCAGTTCA----CT-----GC-CTTTG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1928 38 +     17741 TTG---A------TTTCGGAGACAT---------TCAGAGCAGTTCT----CC-----GC-CTTCG
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2553 38 -     15923 TTG---A------TTTCGGAGACAT---------TCAGAGCAGTTCT----CC-----GC-CTTCG
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672835 38 +   5030052 TTG---A------TTTCGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTCG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2829 38 -     16391 TTG---A------TTTCGGAGACAT---------TCAGAGCAGTTCT----CC-----GC-CTTCG
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2388 38 -     17186 TTG---A------TTTCGGAGACAT---------TCAGAGCAGTTCT----CC-----GC-CTTCG
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16916 37 -     32367 CTT---A------TGTAGGAGACAT---------TTAA-AAAATTCA----TT-----GC-CTATG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       20993 38 -     45910 TTT---A------TTTAGGAGGCAT---------TCAAAGCAATTTG----CT-----GC-CTTTC
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6159 31 -     15198 TTT---A------TTTAGGAGATAT---------TCAGAGCAGTTCA----CT-------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 7
s Ateles_geoffroyi_b.tarseq_1536                               275426 38 +  21539123 TTG---A------TTTAGGAGACAT---------TCAGAGCGGTTCT----CT-----GC-CTTTG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11594 38 +     48076 TCG---A------TTTAGGAGACAT---------TCAGAGCGGTTCT----CT-----GC-CCTTG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6729 38 -     28759 TTG---A------TTTAGGAGACAT---------TTAGAGCAGTTCT----CT-----GC-CCTTG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34283 38 +     44353 TTG---A------TTTAGGAGACAT---------TCAGAGCGGTTCT----CT-----GC-CTTTG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49654 38 -     71267 TCG---A------TTTAGGAGACAT---------TCAGAGCGGTTCT----CT-----GC-CCTTG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23712 38 -     33135 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CCTTG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7001 38 +     11645 TTT---A------TTTAGGAGACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7009 38 -     19611 TTT---A------TTTAGGAGACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964238 38 -  23207421 TTT---A------GGTAGGAGACAT---------TCAAAGCAGTTCA----CT-----GC-CTTTG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          738 38 -     25979 TTT---A------GGTAGGAGACAT---------TCAAAGCAGTTCA----CT-----GC-CTTTG
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87107 38 +    124022 TTT---A------TTTAGGAGACAT---------ACCAAGCAGTTCA----CT-----GT-CTTCG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22649 38 +    288883 TTT---A------TTTCGGAGACAT---------ATCGAGCAGTTCA----CT-----GC-CTTTG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357039 38 +  48749331 TTT---A------TTTCGGAGACAT---------ATCGAGCAGTTCA----CT-----GC-CTTTG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755603 38 +   1948126 TTT---A------TTTCGGAGACAT---------ATCGAGCAGTTCA----CT-----GC-CTTTG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545745 38 -  45695690 TTT---A------TTTCGGAGACAT---------ATCGAGCAGTTCA----CT-----GC-CTTTG
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530760 38 -   4408762 TTT---A------TTTCGGAGACCT---------ATTGAGCAGTTCA----CT-----GC-CTTTG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8602 38 +     28062 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43896 38 -     91139 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21422 38 +     95584 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21335 38 +    119600 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10908 37 +     18648 TTG---A------TTTCGGAGGCGC---------TCAGAGCAGC-CT----CC-----GC-CTTCA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10442 37 -     13885 TTG---A------TTTCGGGGGCGC---------TCGGAGCAGC-CT----CT-----GC-CTTCA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2513 37 -      8861 TTG---A------TTTCGGAGGCGT---------TCAGAGCAGC-CT----CC-----GC-CTTCA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454905 37 + 189096842 TTG---A------TTTCGGAGGCGT---------TCAGAGCAGC-CT----CC-----GC-CTTCA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2428 37 +      8664 TTG---A------TTTCGGAAGCGT---------TCAGAGCAGC-CT----CC-----GC-CTTCA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631755 38 +  17673402 TTT---A------TTTGGAAGACAT---------CCAGTGCAATTCA----CT-----GC-CTTTG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666042 38 +   7040546 TTT---A------TTTGGAAGACAT---------CCAGTGCAATTCA----CT-----GC-CTTTG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209701 38 +   1652518 TTT---A------TTTGGAAGACAT---------CCAGTGCAATTCA----CT-----GC-CTTTG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506124 37 +  60362399 -TC---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----AG-CTTTG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9760 37 -     23171 -TC---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----AG-CTTTG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223103 37 +   9314153 -TC---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----AG-CTTTG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616238 37 +  59632846 -TC---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----AG-CTTTG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107819 37 -  63665305 -TC---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----AG-CTTTG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409828 38 -  46296322 TTT---A------TTTAGGAGACAT---------ACCAAGCAGTTCA----CT-----GC-CTTTG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592102 38 +  44709034 TTT---A------TTTAGGAGACAT---------ACCAAGCAGTTGA----CT-----GC-CTTTG
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    270 38 -      1607 TTT---A------TTTAGTAGATAT---------TTAGAACAATTCA----CC-----AC-ACATG
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271205 38 +    496798 TTT---A------TTTAGAAGATAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1019 30 +      9923 -TC---A------TTCAGGAGCCAT---------TCAGAGCAGTTCA----CC-------------
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 7
s Castor_canadensis.CasCan_scaffold_39952                    28409 37 -     39886 TTT---A------TCTGGA-GATAT---------TTGGAACAATTCA----CT-----GT-CTTGG
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80301 38 -    217609 GTT---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----TT-----GC-CTTTG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997141 34 +  23392119 ttt---a------tttagtagACAT---------TTAGAACAATTAA----CT-----G-----TG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000582 34 +  23407841 ttt---a------tttagtagACAT---------TTAGATCAATTAA----CT-----G-----TG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63663 34 -     66877 TTT---A------TTTAGTAGACAT---------TTAGATCAATTAA----CT-----G-----TG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5826 37 -     12580 TTG---A------TTTCGGAGGCGC---------TCAGAGCAGC-CT----CC-----GC-CTTCA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43883 37 +     53515 TTA---A------TTTCGGAGGCGC---------TCAGAGCAGC-CT----CC-----GC-CTTCA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373646 38 -  26074798 TTG---A------TTTCAGAAGCAT---------TCAGAGCAGTTCT----CC-----GC-CTTCA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8700 38 -     34880 TTG---A------TTTCAGAAGCAT---------TCAGAGCAGTTCT----CC-----GC-CTTCA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67796 38 -     89041 TTG---A------TTTCAGAAGCAT---------TCAGAGCAGTTCT----CC-----GC-CTTCA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3165 38 -      5494 TTT---A------TTTAGAAGATAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492924 38 -  27778364 TTC---C------TTGAGAAGACAT---------TCAGACCAGTTCA----CT-----GC-CTTTG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19757 38 +     27315 TTC---C------TTGAGAAGACAT---------TCAGACCAGTTCA----CT-----GC-CTTTG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142011 38 -   4669795 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45755 38 +     47900 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1183 38 -     14410 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45567 38 -    148725 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27776 38 -     40656 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7740 38 +     20796 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12858 38 -     17524 TTG---A------TTTAGGAGATAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28581 38 -     34525 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12361 38 -     25376 TTG---A------TTTAGGAGATAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364948 38 -  39242232 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270675 38 +  21565898 TTG---A------TTTAGGAGATAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33043 38 -     45857 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27944 38 -     32606 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4106 38 +      8499 TTG---A------TTTAGGAGATAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26502 38 +     70610 TTG---A------TTTAGGAGATAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23463 38 +     36323 TTG---A------TTTAGGAGATAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13422 29 -     19938 TTT---A------TTGGGAAGC------------------CAGTCCC----CT-----GC-CTCTG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31375 38 -     33796 TTT---A------TTTAGGAGACAT---------TCAGAGCAATACA----CT-----GC-CTTTG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5889 38 -     15404 TTT---A------TTTAGGAGACAT---------TCAGAGCAATACA----CT-----GC-CTTTG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9709 38 -     32913 TTG---A------TTTAGGAGACAT---------TCAGAGCAGCTCT----CT-----GG-TTTTG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20122 38 -     40346 TTG---A------TTTAGGAGACAT---------TCAGAGCAGCTCT----CT-----GG-TTTTG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20377 38 +    216457 TTG---A------TTTAGGAGACAT---------TCAGAGCAGCTCT----CT-----GG-TTTTG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20170 38 +     39636 TTG---A------TTTAGGAGACAT---------TCAGAGCAGCTCT----CT-----GG-TTTTG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239509 38 -   2543920 ttt---a------tttagtaGTTAT---------TTAGAACAATTCA----CT-----GC-ATGTG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4758 37 +      5346 T-G---A------TTTCGGAGGCGC---------TCAGAGCAGTTCT----CC-----GC-CTTCA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43233 38 -    112038 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8784 38 +     34062 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344364 38 +  18827391 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10906 38 -     44032 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305689 38 - 135778131 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15554 29 +     15858 TTT---A------TTTAGGAGT------------------CCATTCA----CT-----GC-ATCTG
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607129 29 -    839153 TTT---A------TTTAGGAGT------------------CCATTCA----CT-----GC-TTCTG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2258 38 +      2406 ATT---A------TTTAGGAGATAT---------TCAAAGCAGTTTA----TT-----GC-CTCCA
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             410094 38 -   2368649 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      379975 38 - 200372422 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3532 38 -     84244 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35807993 16 +  53390261 ttt---a------tttaggagACAT-----------------------------------------
i Condylura_cristata.JH655891.1                          C 0 I 6
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3516 27 -      8242 --------------------GACAT---------TCAGAGCAGTTCA----TT-----GT-CTTTG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44916 36 -     83289 C-T---A------TTTCAGAGTTGT---------TTAGCACAATCTA----CC-----TC-TTTC-
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115592 35 - 224834208 C-T---A------TTTTGGAGTTAC---------TTAGCA-AATCCA----CT-----GC-CCTC-
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10116 31 +     12657 TGT---A------TTTAGGTGACAT---------Taagaataataca----gt-------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 484
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5084 38 +     87169 TTC---A------TTTAGGATACAT---------TCAAAGCAGTTCA----TC-----AG-CCTTG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646152 25 -   1526836 ----------------------TAT---------TTAGAAGAATTCA----CT-----GC-CTTTG
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19178 38 +     50838 ttt---a------tttagcatATAT---------TTAGGACAATTCA----CT-----AC-ACATG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5066 36 +     36344 TTT---A------TTTAGTAGATAG---------TTAGAACAATTCA----CT-----G---TGTG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28843 36 +     75252 TTT---A------TTTAGTAGATAT---------TTAGAACAATTCA----CT-----G---TGTG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110774 29 -   2246927 TTC---A------CGGAGCAGT------------------CTGTCCC----CT-----GC-CTCTG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293311 38 +  12879189 TTT---A------TTTAGGAGACAT---------TTAGAGCAGTTCA----CT-----GC-CTTTG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632646 38 -  35494412 TTT---A------TTTAGGAGACAT---------TCAAAGCAGTTCA----CT-----GC-CTTTG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866082 31 -  20541912 TTC---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-------------
i Desmodus_rotundus.KZ672289.1                           C 0 I 7
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665208 38 -   1390856 TTC---T------TTGAGAAGACAT---------TCAGACCAGTTCA----CT-----GC-CTTTG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140001 38 -    198055 TTC---C------TTGAGAAGACAT---------TCAGACCAGTTCA----CT-----GC-CTTTG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99591 38 -    115145 TTT---A------TTTAGTAGATAT---------TTAGAATAACTCA----CT-----GC-ATGTG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951301 38 -  37912305 TTT---G------TTTAGGAGCTAT---------TTAGCACAATTCT----TT-----GC-Ctttg
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6233 38 -     10735 TTT---G------TTTAGGAGCTAT---------TTAGCACAATTCT----TT-----GC-CTTTG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856261 36 - 111700974 --T---A------TTTAGGAGATAT---------GCAAAGCAGCTCA----CA-----GG-CTCAG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               6987 38 +     19438 ttt---a------tttaggtGACAT---------TCAGAGCAGTTCA----CT-----GC-CTTTG
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240466 37 -    607251 TTT---A------TTTAGGAGACAT---------AG-GAGCAGTTCA----ct-----gc-ttttg
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226474 42 +  10337057 TTT---A------TTTAGGAGACAA---------TCCAAGTAGTTCATCCACT-----GC-CTCtg
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31727 36 +    110024 T-T---A------TTTCAGTGTTAT---------TTAGCACAACACA----CT-----GC-CTTC-
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01026522.1                           13698 36 +     18970 T-T---A------TTTGAGTGTTAT---------TTATCACAACACA----CT-----GC-CTTC-
i Ellobius_talpinus.LOJH01026522.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               24916847 37 +  41312741 -tc---a------tttaggaGAAAT---------TCAGAGCAGTTCA----CC-----AG-CTTTG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579628 38 +  14770903 TTT---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----GC-CTTTA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042129 38 -   4378816 TTC---A------CTGAGGAGACAC---------GCAGAGTAGTTCA----CT-----GC-CTTTG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376067 38 +  39960074 TTC---A------CTGAGGAGACAT---------GCAGAGCAGTTCA----CT-----GC-CTTTG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412049 38 -    498745 TTC---A------CTGAGGAGACAT---------GCAGAGCAGTTCA----CT-----GC-CTTTG
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666768 29 +   7059049 TTT---A------TTTAGGAGACAC------------------TTTA----CT-----GC-CTTTG
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263900 38 +  21539334 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71852 38 -    133382 TTT---A------TTTAGGAGACAT---------TCAAAGCAGTTGA----CT-----GC-CTTTG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              439 38 -      1072 TTT---A------TTTAGGAGACAT---------TCAAAGCAGTTCA----CT-----GC-CTTTG
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15516 38 -     24895 TTT---A------TTTAGGACACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43226 38 -     70999 TTT---A------TTTAGGACACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87196 38 +    112731 TTT---A------TTTAGGACACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43758 38 +     68309 TTT---A------TTTAGGACACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54083 38 -     65740 TTT---A------TTTAGGACACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24715 38 -     75513 TTT---A------TTTAGGACACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48910 38 -     97555 TTT---A------TTTAGGACACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5634 38 +     30972 TTT---A------TTTAGGACACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43354 38 -     52037 TTT---A------TTTAGGACACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59757 38 -    111500 TTT---A------TTTAGGACACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247548 34 - 206538554 TTC---A------TTTAGGAGAC-------------AGAACAGTTTA----CT-----AG-CCTTG
i Felis_catus.CM001381.2                                 C 0 I 1
s Felis_catus_fca126.CM031415.1                          185117334 34 - 205367284 TTC---A------TTTAGGAGAC-------------AGAACAGTTTA----CT-----AG-CCTTG
i Felis_catus_fca126.CM031415.1                          C 0 I 1
s Felis_nigripes.FelNig_flattened_line_31944                 28432 34 -     30238 TTC---A------TTTAGGAGAC-------------AGAACAGTTCA----CT-----AG-CCTTG
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922712 38 -   3816255 ttt---a------tttagtagatat---------ttagaAAAATCCA----CT-----GT-GTGTG
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126362 38 -    137831 TTT---A------TTTAGGAGGCAT---------TCAAAGTAATTTG----CT-----GC-CTTTG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9907 38 +     22493 TTT---A------TTTAGGAGGCAT---------TCAAAGTAATTTG----CT-----GC-CTTTG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            21977 38 -     32986 TTT---A------TTTAGGAGGCAT---------TCAAAGTAATTTG----CT-----GC-CTTCG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1886 38 -     28519 TTT---A------TTTAGGAGACAT---------TCAAAGCAATTCA----CT-----GC-CTTTG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92172 38 -     95226 TTT---A------TTTAGGAGACAT---------ACCGAGCAATTCA----CT-----GC-CTTTG
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            1555 36 -      6791 -tt---a------tttagaAAATAT---------TTAGAACAATACT----CT-----GC-TTTT-
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6517 38 -      8343 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTTT----CT-----GC-CTTTG
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 72010 38 +  33314783 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTTT----CT-----GC-CTTTG
i Gorilla_gorilla.LT578336.1                             I 29 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2681 38 -     78134 TTT---A------TTTAGAAAATAT---------TTAGAACAGTACT----GT-----GT-TTTTG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15445 38 -     40692 TTT---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----GC-CTTTG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36847 38 +     49394 TTT---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----GC-CTTTG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61715 38 -     66874 TTT---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----GC-CTTTG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10589 38 -     42923 TTT---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----GC-CTTTG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17588 38 -     53142 TTT---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----GC-CTTTG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31526 38 -    327341 TTC---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----TC-----AG-CCTTG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9846 38 +     48891 TTT---A------TTTAGGAGACAT---------ACCAAGCAGTTCA----CT-----GC-CTTTG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933125 38 -  22651954 ttt---a------tttagtagatat---------ttagaACAATCCA----CT-----GG-ATGTG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                 966 37 +      8654 TTT---G------CTTAGGAACCCT---------TCCGAGA-GTTCA----CT-----GC-CTCTG
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8354 38 -     36432 TTT---A------TTTAGGAGACAT---------TCAAAGCAGTTCA----CT-----GC-CTTTG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552344 38 -   1711038 TTG---A------TTTAGAGGCCAT---------TCAGAGCAGTTCA----CT-----GT-CTTTG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1784 38 -      2730 TTG---A------TTTAGAAGCCCT---------TCAGAGCAGTTCA----CT-----GT-CTTTG
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143541 38 -    630532 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----AC-CTTTG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70696 38 +     83186 TTC---A------TTTTGCAGACAT---------TCAGAGCAGTTCA----CC-----AG-CCTTG
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 225
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72586 39 +    143317 TTT---A------TTTAGTAGACAT---------TTAGAACAATTAA----CTACTGTA-----TG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6575 38 +     12352 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13759 38 +     55766 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053359 38 + 191637585 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802237 38 +  11177569 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7874 38 -    135385 TTT---A------TTTAGTAGATAT---------TTAGAACAATCCA----CT-----GT-ATTTG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387583 26 +   7955117 ttt---a------tttagaagacaT---------TTTTAACAAT----------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 2
s Indri_indri.k141_2415743                                    3145 38 +     11955 TTT---A------TTTAGGAGACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10747 38 -     16823 TTT---A------TTTAGGAGACAT---------TCAAAGCAGTTCA----CT-----GC-CTTTG
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240842 31 +   9596543 TTT---A------TGTATGAGAGAT---------TTAGAA-----------CT-----TC-CTTTG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72587 38 -     97402 TTT---A------TTTAGGAGACAT---------TCAAAGCAGTTCA----CT-----GC-CTTTG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          43977 38 +    110728 TTG---A------TTTAGGAGACAT---------TCAGAGCGGTTCT----CT-----GC-CTTTG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    32883 37 -     49555 -TT---A------TTTAGGGGACAT---------TCAGAGCAGTTCA----CT-----GC-Ctcta
i Lasiurus_borealis.LasBor_scaffold_26245                I 8 I 602
s Lemur_catta.scaffold_24                                 14760238 38 +  30322482 TTT---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----GC-CTTTG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4879 38 -     13097 TTG---A------TTTCGGAGGCAC---------TCAGAGCAGTTCT----CC-----GC-CTTCA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4633 38 +      5940 TTG---A------TTTCGGAGGCAC---------TCAGAGCAGTTCT----CC-----GC-CTTCA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4456 38 -      5717 TTG---A------TTTTGGAGGCAC---------TCAGAGCAGTTCT----CC-----GC-CTTCA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10848 37 -     11567 TTG---A------TTTCGGAAGCAC---------TCAGAGCAGC-CG----CC-----AC-CTTCA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12229 37 -     12945 TTG---A------TTTCGGAAGCAC---------TCAGAGCAGC-CG----CC-----GC-CTTCA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9750 38 +     29618 TTT---A------TTTAGGAGACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9746 38 +     31569 TTG---A------TTTAGGAGACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9756 38 +     24756 TTT---A------TTTAGGAGACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9756 38 +     16388 TTT---A------TTTAGGAGACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814229 37 -   3914936 -TT---A------TTTAGGACACAT---------TCAGAGCAGTTCA----CC-----AG-CTTTG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18591 38 +     24238 TTT---G------TTTAAGAGGCAT---------TCAGAGCAGTTCA----CT-----AC-CTTTG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341932 38 +    662738 TTT---A------TTTAGGAGACAT---------TCAAAGCAGTTCA----CT-----GC-CTTTG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334896 38 -   1826925 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GT-CTTTG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12060 38 +     19643 TTT---A------TTTAGGAGGCTT---------TCAAAGCAATTTG----CT-----GC-CTTTG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045730 38 -   6120653 TTT---A------TTTAGGAGGCTT---------TCAAAGCAATTTG----CT-----GC-CTTTG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085633 38 +  43346337 TTT---A------TTTAGGGACCAT---------TCAGAGCGGTTCA----GT-----GC-CTCTG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615393 37 +  59628241 -TC---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----AG-CTTTG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46285 38 -     61512 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373947 38 -  60120075 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26215 38 +     30207 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1053 38 -      5035 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26168 38 +     30527 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37344 38 -     50087 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GA-CTTTG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47088 38 +     51645 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416291 38 - 187317192 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400521 38 +  25927173 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49693 38 -     62418 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2224 38 +     14901 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----TT-----GC-CTTTG
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46165 38 +     59329 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272073 38 +    668171 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   711 38 -      5049 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3871 38 +     17132 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223955 38 -    270270 TTT---A------TTTAGTTGACAT---------TCAGAGCAGTTCA----CT-----GC-CTTTG
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323361 38 +  24302211 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358192 38 -    752769 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674280 36 -    737560 TTC---A------TTTAGGAGACAT---------TTGGAGCAGT--G----TT-----GC-CTTTG
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221578 38 +    317179 ttc---a------tttaggaGACAT---------TTGGAGCAGTTCG----TT-----AC-CTTTG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501787 38 +  40650429 ttt---a------tttagaagacat---------ttttaaCAATTCA----CT-----GC-CTTTG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151124 38 +    207569 TTG---A------TTTAGGAGATAT---------TCAGAGCAGTTCA----CT-----GT-CTTTG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26946 37 -     74585 -TC---A------TTTAGGAGAAAT---------TCAGAGCAGTTCA----CC-----AG-CTTTG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50908 36 -    140813 T-A---A------TTTCAGAGTTAC---------TTAGCACAATCCA----TG-----GC-CTTC-
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 C 0
s Mesocricetus_auratus.KB708134.1                         17429974 36 +  29670104 T-T---A------TTTTGGAGTTAT---------TTAGCACAATCCG----CT-----CC-CCTC-
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88216 38 +     93471 TTT---A------TTTAGGAGACAT---------TCAAAGCAGTTCA----CT-----GC-CTTTG
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11015 37 +     17804 TTG---A------TTTCGGAGGCGC---------TCAGAGCAGC-CT----CC-----GC-CTTCA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11515 37 -     12984 TTG---A------TTTCGGAGGCGC---------TCAGAGCAGC-CT----CC-----GC-CTTCA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19831 37 -     26561 TTG---A------TTTCGGAGGCGC---------TCAGAGCAGC-CT----CC-----GC-CTTCA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985588 38 +  93316391 TTT---A------TTTAGGAGACAT---------TCAGAGCAATACA----TT-----GC-CTTTG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47496 20 +    145209 --T---C------TTTAGGAGACGT---------CCAAAG--------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 7
s Micronycteris_hirsuta.MicHir_scaffold_2233                185812 31 +    200668 TCC---A------TTTAGGAGATGG---------TCAGAGCAGTTCA----CT-------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 7
s Microtus_ochrogaster.CM001695.1                         15963169 36 +  27267610 T-T---A------TTTCAGCATTAT---------TTAGTACAACACA----CT-----GC-CTTC-
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6363966 38 -   8254450 TTT---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----GC-CTTTA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42873 38 -     48117 TTT---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----AC-CTTTA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23395 38 -     27822 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9240 37 +     27589 -TT---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CC-----AG-CTTTG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53371 38 -     62432 TTT---A------TTTAGGAGACAT---------TCGGAGCAATACA----CT-----GC-CTTTG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360321 38 +    437263 TTT---A------TTTAGGAGACAT---------TCAAAGCAGTTCA----CT-----GC-CTTTG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180036 31 +    366855 TTT---A------TTTAGGAGATAT---------TCAGAGCAGTTCA----CT-------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 7
s Moschus_moschiferus.MosMos_scaffold_13123                  26292 38 -     82753 TTT---A------TTTAGGAGACAT---------ACCGAGCAGTTCT----CT-----GC-CTTTG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19251 38 -     63510 TTC---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----TC-----AG-CCTTG
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39935 32 +     47283 ---------------TAGGAGACGT---------TCAGAGCAGTTCA----CT-----GC-CTTTA
i Murina_feae.MurFea_scaffold_17764                      I 2 C 0
s Mus_caroli.LT608237.1                                   35595045 35 + 120012414 T-C---A------TGT-AAAGTTAT---------TTAGCACAATCTA----TG-----GC-CTTC-
i Mus_caroli.LT608237.1                                  I 1164 C 0
s Mus_musculus.chr8                                       41688271 35 + 129401213 T-T---A------TGT-AAAGTTAT---------TTAGCACAATCCA----TG-----GC-CTTC-
i Mus_musculus.chr8                                      I 1 C 0
s Mus_spretus.CM004101.1                                  39497565 35 + 130317789 T-T---A------TGT-AAAGTTAT---------TTAGCACAATCCA----TG-----GC-CTTC-
i Mus_spretus.CM004101.1                                 I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84239 38 -     86153 TTT---A------CTTAGAAAATAT---------TTACAACAGTACT----CT-----GC-TTTTG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355868 37 +  14710649 -TC---A------TTTAAGAGAAAT---------TCAGAGCAGTTCA----CC-----AG-CTTTG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63842 38 +     67721 TTT---A------TTTAGTAGATAT---------TTAGAACAATTCA----CC-----AC-ACATG
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794189 38 +  10118263 ttt---a------tttaggAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388362 38 +   6019432 TTT---A------TTTAGGAGATAT---------TCAGAGCAGTTCT----CT-----GC-CTTTA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384149 38 +   4330536 TTT---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3183 38 +     18357 TTT---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120523 29 +    130748 TTT---A------TTTAGGAGT------------------CAGTTCA----CT-----GC-CTCTG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947464 38 +   3037898 AGG---A------TTTTGGCAACAT---------TTAGAACAATCCA----CT-----GC-CTTTG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30051 38 +     34575 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1232987 38 -   7148211 TTT---A------TTTAGGAGACAT---------TCAAAGCAGTTCA----CT-----GC-CTTTG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nomascus_annamensis.k141_1771965                           54467 38 -    132029 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10562 38 -     16345 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16447 38 +     22201 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414668 38 -  22158432 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26845 38 -     54323 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                198989 37 +   9404916 -TC---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----AG-CTTTG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638959 38 + 196305487 TTT---A------TTTAGGAGGCAT---------TCAAAGCAATTTG----CT-----GC-CTTTG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1562 38 -      9413 TTT---A------TTTAGGAGGCAT---------TCAAAGCAATTTG----CT-----GC-CTTTG
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566342 38 - 199412804 TTT---A------TTTAGGAGGCAT---------TCAAAGCAATTTG----CT-----GC-CTTTG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557653 38 -   3988456 TTT---G------TTTAGGAGACAT---------TCAGAACAAGTCT----CT-----CC-CTTTG
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055796 38 -  11899542 ttt---a------tttagtagatat---------ttaGAACAATTCA----CT-----GC-ACATG
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452657 37 +   2017862 -TG---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CC-----AG-CTTTG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437062 37 -    630418 TTT---A------TTTAGGAGACAT---------AG-GAGCAGTTCA----CT-----GC-CTTTG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15256 38 +    150152 TTT---A------TTTAGGAGACAT---------ACTGAGCAATTCA----CT-----GC-CTTTG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93523 36 -    140218 T-T---A------TTTCAGAGTTAT---------TTAGCACAACTCA----CT-----AC-CCTC-
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 C 0
s Orcinus_orca.KB316932.1                                  8103389 38 +  10937097 TTT---A------TTTAGGAGACAt---------tcaaagcagtttt----tt-----tt-ttttg
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                418 35 +     11607 ------A------TTTGGGAGACAT---------TCAGAGAAGTTCT----GT-----GC-CTTTG
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104387 38 - 174332312 TTT---G------TTTAAGAGACAT---------TCAAAGCAGTTCA----CT-----GC-CTTTG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40032 37 +    559221 -TC---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----AG-CTTTG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41510 38 -     51505 TTT---A------TTTAGGAGGCAT---------TCAAAGTAATTTG----CT-----CC-CTTTG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354513 38 +   1103335 TTT---A------TTTAGGAGGCAT---------TCAAAGTAATTTG----CT-----GC-CTTTG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26404966 38 -  44047080 TTT---A------TTTAGGAGACAT---------ACCAAGCAGTTCA----CT-----GC-CTTTG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5485 38 +     17875 TTT---A------TTTAGGAGACAT---------ACCAAGCAGTTCA----CT-----GC-CTTTG
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.KZ622849.1                                 34244 38 -    110857 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTTT----CT-----GC-CTTTG
i Pan_troglodytes.KZ622849.1                             I 44 I 192
s Panthera_onca.PanOnc_flattened_line_3271                   25255 34 -    230217 TTC---A------TTTAGGAGAC-------------AGAACAGTTCA----CT-----AG-CCTTG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462581 34 -  18783137 TTC---A------TTTAGGAGAC-------------AGAACAGTTCA----CT-----AG-CCTTG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973240 34 +   8748460 TTC---A------TTTAGGAGAC-------------AGAACAGTTCA----CT-----AG-CCTTG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616494 38 +   2937107 TTT---A------TTTAGGAGACAT---------ACCAAGCAGTTCA----CT-----GC-TTTTG
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244193 38 - 183742232 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GT-CTTTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10655 38 +     21308 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293228 38 -  20919399 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GT-CTTTG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23303 38 -     27687 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GT-CTTTG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16449 38 +     16796 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GT-CTTTG
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23260 38 -     23640 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GT-CTTTG
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15831 38 +     78924 TTC---A------TTTAGGAGACTT---------TCAGAGCAGTTCA----CC-----AG-CCTTG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27840 38 +     31479 TTT---A------TTTAGGAGGCGT---------TCAAAGCAATTTG----CT-----GC-CTTTG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20208 38 -     24908 TTT---A------TTTAGGAGGCAT---------TCAAAGCAATTTG----CT-----GT-CTTTG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2645 38 +      9367 TTT---G------TTTAGGATCTAT---------TTAGCTAAGTTTT----TT-----GC-CTTTG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32691 38 -     56120 TTT---A------TTTAGTAGATAT---------TTAAAACAGCCCG----CT-----GT-ATGTG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4915 38 -     63832 TTT---A------TTTAGGAGACAT---------TCAAAGCAGTTCA----CT-----GC-CTTTG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3482 38 +     55023 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3020 38 -     89929 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3610 38 +     40849 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255285 38 +  14605196 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4777 38 +     22231 TTT---C------CTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----GC-CTTTA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65600 38 +    207309 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTTT----CT-----GC-CTTTG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6692 38 -     25401 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32436 38 +     58159 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTTT----CT-----GC-CTTTG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32712 38 +     63561 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTTT----CT-----GC-CTTTG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32472 38 +     51148 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTTT----CT-----GC-CTTTG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557442 38 -   4542175 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32456 38 +     51125 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTTT----CT-----GC-CTTTG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1932 38 +     19503 TTT---A------TTTAGGAGACAT---------TCAAAGCAGTTCA----CT-----GC-CTTTG
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8874 38 +     39866 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-TTCTG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3956 38 -      9282 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-TTCTG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43360 38 -     87950 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-TTCTG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43754 38 -     88961 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-TTCTG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8452 38 -     39403 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-TTCTG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43403 38 +     87928 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTAT----CT-----GC-TTCTG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8451 38 -     60166 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-TTCTG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15388 38 -     67232 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-TTCTG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43304 38 -     90634 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-TTCTG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44771 38 +     89403 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-TTCTG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178671 38 - 189387572 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----AC-CTTTG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193488 38 -   9816681 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----AC-CTTTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28631 37 +     69807 TTG---A------TTTAGGAGACAT---------TCAGAGCA-TTCT----CT-----GC-CTTTG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45812 37 -     80239 TTG---A------TTTAGGAGACAT---------TCAGAGCA-TTCT----CT-----GC-CTTTG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 4956 37 +      7663 TTT---G------CTTAGGAACCCT---------TCCGAGA-GTTCA----CT-----GC-CTCTG
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983386 38 +   4620579 TTT---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----GC-CTTTG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566896 38 -   2598838 TTT---A------TTTAGGAGACAT---------TCAGAGCAATTCA----CT-----GT-CTTTG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4534 38 -      7103 TTT---A------TTTAGGAGACAT---------TCGGAGCAATTCA----CT-----GT-CTTTG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5131 38 -     11706 TTT---A------TTTAGGAGACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8868 38 -     30655 TTT---A------TTTAGGAGACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35182 38 +     46564 TTT---A------TTTAGGAGACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95461 38 -     98465 TTT---A------TTTAGGAGACAT---------TCGGAGCAATTCA----CT-----GT-CTTTG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9100 38 +     35169 TTT---A------TTTAGGAGACAT---------TCAGAGCAATTCA----CT-----GT-CTTTG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38422 36 +     52041 t-a---a------tttcagAGTTAC---------TTAGCACAATCCA----TG-----GC-CTTC-
i Psammomys_obesus.NESX01036366.1                        I 1 C 0
s Pteronotus_parnellii.KE847780.1                            52929 31 -     66298 TTC---A------TCTAGGAGACAT---------TCAGAAGAGTTCA----CT-------------
i Pteronotus_parnellii.KE847780.1                        C 0 I 7
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5442 37 -     18639 -TC---A------TTTAGGAGAAAT---------TCAGGGCAGTTCA----CC-----AG-CTTTG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841527 38 -  28871421 ttt---a------tttaggtGACAT---------TCAGAGCAGTTCA----CT-----GC-CTTTG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538042 38 -   4952924 ttt---a------tttaggtGACAT---------TCAGAGCAGTTCA----CT-----GT-CTTTG
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099897 34 +  38429054 TTC---A------TTTAGGAGAC-------------AGAACAGTTCA----CT-----AG-CCTTG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28000 38 +     91421 TTG---A------TTTAGGGGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154484 38 -   7812017 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8857 38 +     72585 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 53979 37 +     55069 TTT---A------TTTAGGAGACAT---------AG-GAGCAGTTCA----CT-----GC-CTTTG
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023705 36 -  90668790 T-T---A------TGTCAGAGTTAT---------TTAGCACAACCCA----TG-----GC-CTTC-
i Rattus_norvegicus.chr16                                I 1 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915507 38 +   3329780 TTG---A------TTTAGGAGCCAT---------TCAGAGCAGTTCA----CT-----GT-CTTTG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2585 38 +      7119 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123201 38 + 195417433 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237427 38 -   7961872 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76026 38 -    116970 TTT---A------TTTAGGCGACAT---------TCATAGCAGTTCA----CT-----GC-CTTTG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4755 38 +     27962 TTG---A------TTTCGGAGGCGC---------TCAGAGCAGTTCT----CC-----GC-CTTCA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4649 38 +      6077 CTG---A------TTTCGGAGGCAC---------CCAGAGCAGTTCT----CC-----GC-CTTCA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4739 38 +      5971 TTG---A------TTTCGGAGGCAC---------TGGGAGCAGTTCT----CC-----GC-CTTCA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4660 38 +      5932 TTG---A------TTTCGGAGGCAC---------TCGGAGCAGTTCT----CC-----GC-CTTCA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3002 38 -      4390 TTG---A------TTTCGGAGGCAC---------TCGGAGCAGTTCT----CC-----GC-CTTTA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392439 38 - 209938924 TTG---A------TTTCGGAGGCGC---------TCAGAGCAGTTCT----CC-----GC-CTTCA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4608 38 +      5979 TTG---A------TTTCGGAGGCAC---------TCGGAGCAGTTCT----CC-----GC-CTTCA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1178 38 -     22275 CTG---A------TTTCGGAGGCAC---------CCAGAGCAGTTCT----CC-----GC-CTTCA
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8654 38 +     16473 TTT---A------TTTAGGAGACAT---------ACCAAGCAGTTCA----TT-----GC-CTTTG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109775 38 + 121099817 TTG---A------TTTCGGAGGCAT---------TTAGAGCAGTTCT----CC-----AC-CTTCA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31342 38 -     47369 TTG---A------TTTCGGAGGCAT---------TTAGAGCAGTTCT----CC-----AC-CTTCA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31728 38 -     79414 TTG---A------TTTCGGAGGCAT---------TTAGAGCAGTTCT----CC-----AC-CTTCA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28419 38 -     34454 TTG---A------TTTCAGAGGCAT---------TTAGAGCAGTTCT----CC-----AC-CTTCA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15820 38 -     22428 TTG---A------TTTCGGAGGCAT---------TTAGAGCAGTTCT----CC-----AC-CTTCA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  30974 38 -     47109 TTG---A------TTTCGGAGGCAT---------TTAGAGCAGTTCT----CC-----AC-CTTCA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239020 38 +   5703754 TTG---A------TTTCAGAAGCAT---------TCAGAGCAGTTCT----CC-----GC-CTTCA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8610 38 +     21866 TTG---A------TTTCAGAAGCAT---------TCAGAGCAGTTCT----CC-----GC-CTTCA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116669 40 +    313613 TTTTTTT------TTTAGAAGACACTCAGAGTGGT---------TAA----CT-----GC-CTTT-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26326 38 +     27374 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29838 38 +     58920 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16336 38 -     45317 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            23994 38 -     42441 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26672 38 -     29113 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29747 38 -     48123 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864940 38 -   1910179 TTG---A------TTTAGGTGACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672049 31 +  18376816 TGT---A------TTTAGGAGACAT---------TTAGAGCAGTTCA----AT-------------
i Sorex_araneus.JH798187.1                               C 0 I 4
s Spermophilus_dauricus.KZ294078.1                         1869161 26 +   3870691 ttt---a------tttagaagacaT---------TTTTAACAAT----------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525              7531 37 -     97271 -TC---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CC-----GG-CTTTG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125667 38 +    196729 TTC---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----TC-----AG-CCTTG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644720 38 +  69701581 TTT---A------TTTAGGAGACAT---------TCAGAACAGTTCT----TT-----GT-CTTTG
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391927 38 +   1523678 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15100 38 +     22964 TTT---A------TTTAGGGGACAT---------TCAGAGCAGTTCA----CT-----GC-CTTTA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3514 29 +      5583 TTT---A------TTTAGGAGT------------------CAGTTCA----CT-----GC-CTCTG
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192409 38 +    199430 TTC---A------CTGAGGAAATGT---------TCAGGGCAGTTGA----CT-----GT-CTTTG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106377 38 -    539355 TTC---A------CCGAGGAAACGT---------TCAGGGCAGTTGA----CT-----GT-CTTTG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1437 38 +      9917 TTT---A------TTTAGAAGACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8235 38 +     20590 TTT---A------TTTAGAAGACAT---------TCAGAGCAATTCA----CT-----GC-CTTTG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354179 38 - 186847797 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24865 38 -     33621 TTT---A------TTTAGTAGATAT---------TTAGAACAACCCA----TT-----GT-ATATG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20501 29 -     31044 TTT---A------TTTGCAAGT------------------CAGTCTA----CT-----GC-CTCTG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480930 31 -    610378 TTC---A------TTTAGGAGACAT---------TCAGAGCAGTTCC----CT-------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 7
s Trachypithecus_auratus.k141_1189070                        21871 38 +     26378 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34547 38 -     78344 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21196 38 +     25722 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29503 38 -     62838 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29547 38 +     46913 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10356 38 -     28527 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31438 38 -     64340 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29476 38 -     63452 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10923 38 +     22490 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4346 38 -      6147 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11259 38 -     13050 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256489 38 -   6242583 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2517 38 +     19340 TTG---A------TTTAGGAGACAT---------TCAGAGCAGTTCT----CT-----GC-CTTTG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174263 38 -    200418 TTT---A------TTTAGGAGATGT---------ACCGAGACGTTCA----CT-----GT-CTTTG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482341 23 -  10818551 ------------------------T---------TCAGAGCGGTTCA----CT-----GC-CTCCG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835166 38 -   4065304 TTT---A------TTGAGGAGATGT---------GCAAAGCGAGTCC----CT-----GC-CTTTG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9186 38 -     70247 TTT---A------TTGAGGAGATGT---------GCAGAGCGAGTCC----CT-----GC-CTTTG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366502 38 -  33153633 TTT---A------TTTAGGAGACAT---------TCAAAGCAGTTTA----CT-----GC-CTTTG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4393 28 -     21056 TTT---A------TTTAGAAGACAT---------T---------TTA----CT-----GC-CTTT-
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182832 37 +   5085361 -TC---A------TTTAGGGGACAT---------TCTAAGCAGTTCA----CC-----AG-CTTTG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26042 38 -     30710 TTT---A------TTTAGGAGACAT---------TCAGAGCAATTCA----CT-----GC-CTTTC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24949 38 -    147434 TTT---A------TTTAGGAGACAT---------TCAGAGCAATTCA----CT-----GC-CTTTC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77089 38 +   5488506 TTT---A------TTTGGAAGACAT---------CCAGTGCAATTCA----CT-----GC-CTTTG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105755 37 -    112863 -TC---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CT-----AG-CTTTG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174914 38 -    224448 TTA---A------TTTAGGAGATAT---------TTTGAACAATTCA----CT-----GC-CTTTG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29865 37 -     86975 -TT---A------TTTAGGAGACAT---------TCAGAGCAGTTCA----CC-----AG-CTTTG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       787 43 -      1899 TAT---AAAATGACTA-GGAGGTAT---------TTAGAACAATTTA----CT-----CC-CTTTG
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1786 38 +      2126 TTT---A------TTTAGGAGACAT---------TCAAAGCAGTTCA----CT-----GC-CTTTG
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922  6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549  6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339  6 -     41509 I
e Noctilio_leporinus.NocLep_scaffold_7894                   128981  0 -    149072 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6255  7 +     36723 TT--GCA----T-------A
s Acinonyx_jubatus.LLWD01001279.1                           813673  9 +   1699592 TTTTTTA----T-------A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26049  1 +     63021 -------------------A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416133  7 +  29979442 TT--GTA----T-------A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216473  7 +    347723 CT--GTA----T-------A
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 22
s Allactaga_bullata.AllBul_scaffold_20030                    19043  7 -     61208 TT--GTA----T-------A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 15
s Allenopithecus_nigroviridis.k141_3755588                   48900  7 +     53615 TT--GCA----T-------A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           931  7 +     13857 TT--GCA----T-------A
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17482  7 -     21945 TT--GCA----T-------A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19167  7 +     32033 TT--GCA----T-------A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             72999  7 -     84148 TT--GCC----T-------G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45238  7 -     78289 TT--GCC----T-------G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44677  7 +     55831 TT--GCC----T-------G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43127  7 -     64179 TT--GCC----T-------G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            234  7 -      3959 TT--GCC----T-------G
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             41752  7 +     45454 TT--GCC----T-------G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47401  7 +     70886 TT--GCC----T-------G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9574  7 +     30854 TT--GCC----T-------G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33708  7 +     42133 TT--GCC----T-------G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586137  7 +   2318259 TT--GTA----T-------A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177931  7 -    412891 TT--GTG----T-------A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 7 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51244  7 -     68529 TG--GTA----T-------A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1966  7 +     17741 TT--GCC----C-------G
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2591  7 -     15923 TT--GCC----C-------G
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672873  7 +   5030052 TT--GCC----C-------G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2867  7 -     16391 TT--GCC----C-------G
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2426  7 -     17186 TT--GCT----C-------G
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16953  5 -     32367 TT--GTA-------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 22
s Arctocebus_calabarensis.k141_1364444                       21031 14 -     45910 AT--GTA----TGTAGTATG
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6197  7 -     15198 TT--GTG----T-------A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 7 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275464  7 +  21539123 TG--GCC----T-------G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11632  7 +     48076 TT--GCC----T-------G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6767  7 -     28759 TT--GCC----T-------G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34321  7 +     44353 TG--GCC----T-------G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49692  7 -     71267 TT--GCC----T-------G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23750  7 -     33135 TT--GCC----T-------G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7039  7 +     11645 AT--GTA----T-------A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7047  7 -     19611 AT--GTA----T-------A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964276  7 -  23207421 TT--GTA----T-------A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          776  7 -     25979 TT--GTA----T-------A
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87145  7 +    124022 TT--GTA----T-------A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22687  7 +    288883 TT--GTA----T-------A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357077  7 +  48749331 TT--GTA----T-------A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755641  7 +   1948126 TT--GTA----T-------A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545783  7 -  45695690 TT--GTA----T-------A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530798  7 -   4408762 TT--GTA----T-------A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8640  7 +     28062 CT--GCC----T-------A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43934  7 -     91139 CT--GCC----T-------A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21460  7 +     95584 CT--GCC----T-------A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21373  7 +    119600 CT--GCC----T-------A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10945  7 +     18648 GC--GCC----C-------G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10479  6 -     13885 GC--GCC----T--------
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2550  7 -      8861 GC--GCC----T-------G
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454942  7 + 189096842 GC--GCC----T-------G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2465  7 +      8664 GC--GCC----T-------G
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631793  7 +  17673402 TT--GTG----T-------A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666080  7 +   7040546 TT--GTG----T-------A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209739  7 +   1652518 TT--GTG----T-------A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506161  7 +  60362399 TT--GTA----T-------A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9797  7 -     23171 TT--GTA----T-------A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223140  7 +   9314153 TT--GTA----T-------A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616275  7 +  59632846 TT--GTA----T-------A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107856  7 -  63665305 TT--GTA----T-------A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409866  7 -  46296322 TT--GTA----T-------A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592140  7 +  44709034 TT--GTA----T-------A
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    308  4 -      1607 -----TA----T-------A
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271243  7 +    496798 TT--GTA----T-------A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1056  7 +      9923 TT--ACG----T-------A
i Carollia_perspicillata.CarPer_scaffold_107871          I 7 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28446  7 -     39886 TG--GTA----T-------A
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80339  7 -    217609 TT--AGA----T-------A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997175  7 +  23392119 TT--GCA----C-------A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000616  7 +  23407841 TT--GCA----C-------A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63697  7 -     66877 TT--GCA----C-------A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5863  7 -     12580 GC--GCC----T-------G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43920  7 +     53515 GC--GCC----T-------G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373684  7 -  26074798 TT--GCC----T-------G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8738  7 -     34880 TT--GCC----T-------G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67834  7 -     89041 TT--GCC----T-------G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3203  7 -      5494 TT--GTA----T-------A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492962  7 -  27778364 TT--GTA----T-------A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19795  7 +     27315 TT--GTA----T-------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142049  7 -   4669795 TT--GCA----T-------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45793  7 +     47900 TT--GCA----T-------A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1221  7 -     14410 TT--GCA----T-------A
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45605  7 -    148725 TT--GCA----T-------A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27814  7 -     40656 TT--GCA----T-------A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7778  7 +     20796 TT--GCA----T-------A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12896  7 -     17524 TT--GCA----T-------A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28619  7 -     34525 TT--GCA----T-------A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12399  7 -     25376 TT--GCA----T-------A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364986  7 -  39242232 TT--GCA----T-------A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270713  7 +  21565898 TT--GCA----T-------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33081  7 -     45857 TT--GCA----T-------A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27982  7 -     32606 TT--GCA----T-------A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4144  7 +      8499 TT--GCA----T-------A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26540  7 +     70610 TT--GCA----T-------A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23501  7 +     36323 TT--GCA----T-------A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13451  7 -     19938 CT--GTA----G-------A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31413  7 -     33796 AT--ATA----T-------A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5927  7 -     15404 AT--ATA----T-------A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9747  7 -     32913 TT--GCC----T-------A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20160  7 -     40346 TT--GCC----T-------A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20415  7 +    216457 TT--GCC----T-------A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20208  7 +     39636 TT--GCC----T-------A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239547  7 -   2543920 TT--GCA----C-------A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4795  7 +      5346 TC--GCC----T-------C
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43271  7 -    112038 CT--GCC----T-------A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8822  7 +     34062 CT--GCC----T-------A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344402  7 +  18827391 TT--GCA----T-------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10944  7 -     44032 TT--GCA----T-------A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305727  7 - 135778131 TT--GCA----T-------A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15583  7 +     15858 TT--GTA----T-------A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607158  7 -    839153 TT--GTA----T-------A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2296  7 +      2406 TT--GCA----T-------A
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             410132  7 -   2368649 TT--GCA----T-------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380013  7 - 200372422 TT--GCA----T-------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3570  7 -     84244 TT--GCA----T-------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808015  5 +  53390261 ----GTA----T-------G
i Condylura_cristata.JH655891.1                          I 6 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3543  7 -      8242 TT--GTA----T-------A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44952  1 -     83289 -------------------A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115627  1 - 224834208 -------------------A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10631  6 +     12657 T---ATA----T-------T
i Crocidura_indochinensis.CroInd_scaffold_77846          I 484 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5122  9 +     87169 TTTTTTA----T-------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646177  7 -   1526836 TT--GTA----G-------A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19216  7 +     50838 TT--GCA----T-------A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5102  7 +     36344 TT--GCA----C-------A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28879  7 +     75252 TT--GCA----C-------G
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110803  7 -   2246927 TT--GTA----G-------A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293349  7 +  12879189 AT--GTG----T-------A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632684  7 -  35494412 TT--GTA----T-------A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866120  7 -  20541912 TT--GTA----T-------A
i Desmodus_rotundus.KZ672289.1                           I 7 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665246  7 -   1390856 TT--GTG----T-------A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140039  7 -    198055 TT--GTA----T-------A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99629  7 -    115145 TT--GCA----C-------A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951339  7 -  37912305 tt--gta----t-------a
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6271  7 -     10735 TT--GTA----T-------A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856297  6 - 111700974 TG--GT-----T-------A
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7025  7 +     19438 TT--GTT----T-------A
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240503  7 -    607251 tt--tta----t-------a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226516  7 +  10337057 ct--gta----t-------a
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31763  1 +    110024 -------------------A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13734  1 +     18970 -------------------A
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916884  7 +  41312741 CT--GTA----T-------A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579666  7 +  14770903 TC--ATA----T-------A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042167  7 -   4378816 TT--GCG----T-------A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376105  7 +  39960074 TT--GCA----T-------A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412087  7 -    498745 TT--GCA----T-------A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666797  7 +   7059049 TT--ATA----T-------A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263938  7 +  21539334 TT--GCA----T-------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71890  7 -    133382 TT--GTA----T-------A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              477  7 -      1072 TT--GTA----T-------A
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15554  7 -     24895 AT--GTA----T-------A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43264  7 -     70999 AT--GTA----T-------A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87234  7 +    112731 AT--GTA----T-------A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43796  7 +     68309 AT--GTA----T-------A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54121  7 -     65740 AT--GTA----T-------A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24753  7 -     75513 AT--GTA----T-------A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48948  7 -     97555 AT--GTA----T-------A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5672  7 +     30972 AT--GTG----T-------A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43392  7 -     52037 AT--GTA----T-------A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59795  7 -    111500 AT--GTA----T-------A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247583  9 - 206538554 TTTTTTA----T-------A
i Felis_catus.CM001381.2                                 I 1 C 0
s Felis_catus_fca126.CM031415.1                          185117369  9 - 205367284 TTTTTTA----T-------A
i Felis_catus_fca126.CM031415.1                          I 1 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28466  9 -     30238 TTTTTTA----T-------A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922750  7 -   3816255 TT--GTA----C-------A
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126400 14 -    137831 AT--GTA----TGTAGTCTA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9945 14 +     22493 AT--GTA----TGTAGTCTA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22015 14 -     32986 AT--GTA----TGTAGTCTA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1924  7 -     28519 CT--GTA----T-------A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92210  7 -     95226 TT--GTA----T-------A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            1591  5 -      6791 TT--GGG-------------
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6555  7 -      8343 TT--GCA----T-------A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 72048  7 +  33314783 TT--GCA----T-------A
i Gorilla_gorilla.LT578336.1                             C 0 I 175
s Graphiurus_murinus.GraMur_scaffold_10447                    2719  5 -     78134 TT--GGA-------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15483  7 -     40692 AT--GTA----T-------A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36885  7 +     49394 AT--GTA----T-------A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61753  7 -     66874 AT--GTA----T-------A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10627  7 -     42923 AT--GTA----T-------A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17626  7 -     53142 AT--GTA----T-------A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31564  9 -    327341 TTTCTTA----T-------A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9884  7 +     48891 TT--GTA----T-------A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933163  7 -  22651954 TT--GTA----C-------A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1003  6 +      8654 T---GTC----T-------C
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8392  7 -     36432 TT--GTG----C-------A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552382  7 -   1711038 TT--GTA----T-------G
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1822  7 -      2730 TT--GTA----T-------G
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143579  7 -    630532 TT--GCA----T-------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70959  9 +     83186 TTTTTTC----T-------A
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 225 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72625  7 +    143317 TT--GCA----C-------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6613  7 +     12352 TT--GCA----T-------A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13797  7 +     55766 TT--GCA----T-------A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053397  7 + 191637585 TT--GCA----T-------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802275  7 +  11177569 TT--GCA----T-------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7912  7 -    135385 TT--GCA----C-------A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387611  5 +   7955117 TT--GTA-------------
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Indri_indri.k141_2415743                                    3183  7 +     11955 AT--GTA----T-------A
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10785  7 -     16823 TT--GTA----T-------A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240873  7 +   9596543 TT--GTA----T-------A
i Jaculus_jaculus.JH725527.1                             C 0 I 15
s Kogia_breviceps.KogBre_flattened_line_3970                 72625  7 -     97402 TT--GTA----T-------A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44015  7 +    110728 TT--GCC----T-------G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    63646  7 -     65777 tc--ata----t-------a
i Lasiurus_borealis.LasBor_scaffold_16567                I 37 I 351
s Lemur_catta.scaffold_24                                 14760276  7 +  30322482 AT--GTA----T-------A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4917  7 -     13097 TC--GCC----T-------C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4671  7 +      5940 TC--GCC----T-------C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4494  7 -      5717 TC--GCC----T-------C
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10885  7 -     11567 TC--GCC----T-------G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12266  7 -     12945 TC--GCC----T-------G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9788  7 +     29618 AT--GTA----T-------A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9784  7 +     31569 AT--GTA----T-------A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9794  7 +     24756 AT--GTA----T-------A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9794  7 +     16388 AT--GTA----T-------A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814266  7 -   3914936 TT--GTA----T-------A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18629  7 +     24238 TT--GTA----T-------A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341970  7 +    662738 TT--GTA----T-------A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334934  7 -   1826925 TT--GCA----T-------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12098 14 +     19643 AT--GTA----TGTAGTATA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045768 14 -   6120653 AT--GTA----TGTAGTATA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085671  7 +  43346337 TT--GTA----C-------A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615430  7 +  59628241 TT--GTA----T-------A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46323  7 -     61512 TT--GCA----T-------A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373985  7 -  60120075 TT--GCA----T-------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26253  7 +     30207 TT--GCA----T-------A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1091  7 -      5035 TT--GCA----T-------A
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26206  7 +     30527 TT--GCA----T-------A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37382  7 -     50087 TT--GCA----T-------A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47126  7 +     51645 TT--GCA----T-------A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416329  7 - 187317192 TT--GCA----T-------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400559  7 +  25927173 TT--GCA----T-------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49731  7 -     62418 TT--GCA----T-------A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2262  7 +     14901 TT--GCA----T-------A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46203  7 +     59329 TT--GCA----T-------A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272111  7 +    668171 TT--GCA----T-------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   749  7 -      5049 TT--GCA----T-------A
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3909  7 +     17132 TT--GCA----T-------A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                223993  7 -    270270 TT--GTT----T-------A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323399  7 +  24302211 TT--GCA----T-------A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358230  7 -    752769 TT--GCA----T-------A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674316  7 -    737560 TT--GTG----T-------A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221616  7 +    317179 TT--GTG----T-------A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501825  5 +  40650429 TT--GTA-------------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151162  7 +    207569 TT--GGA----T-------A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26983  7 -     74585 CT--GTA----T-------A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50944  1 -    140813 -------------------A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17430010  1 +  29670104 -------------------A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88254  7 +     93471 TT--GTA----T-------A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11052  7 +     17804 GC--GCC----T-------G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11552  7 -     12984 GC--GCC----T-------G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19868  7 -     26561 GC--GCC----T-------G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985626  7 +  93316391 AT--GTA----T-------A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47523  7 +    145209 TG--GCA----T-------T
i Microgale_talazaci.MicTal_scaffold_6613                I 7 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185850  7 +    200668 TT--GTA----T-------A
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 7 C 0
s Microtus_ochrogaster.CM001695.1                         15963205  1 +  27267610 -------------------A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364004  7 -   8254450 TT--GTA----T-------A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42911  7 -     48117 TT--GTA----T-------A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23433  7 -     27822 TT--GCA----T-------A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9277  7 +     27589 TT--GTA----T-------A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53409  7 -     62432 AT--GTA----T-------A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360359  7 +    437263 TT--GTA----T-------A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180074  7 +    366855 TT--GTA----T-------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 7 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26330  7 -     82753 TT--GTA----T-------A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19289  9 -     63510 TTTCTTA----T-------A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39967  7 +     47283 TC--ATA----T-------A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35595080  1 + 120012414 -------------------A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688306  1 + 129401213 -------------------A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497600  1 + 130317789 -------------------A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84277  5 -     86153 TT--GGG-------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355905  7 +  14710649 CT--GTA----T-------A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63880  4 +     67721 -----TA----C-------A
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794227  7 +  10118263 TC--ATA----T-------A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388400  7 +   6019432 TC--ATA----T-------A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384187  7 +   4330536 TC--ATA----T-------A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3221  7 +     18357 TC--ATA----T-------A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120552  7 +    130748 TT--GTA----T-------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947502  7 +   3037898 AT--GTG----T-------A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30089  7 +     34575 TT--GCA----T-------A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233025  7 -   7148211 TT--GTA----T-------A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nomascus_annamensis.k141_1771965                           54505  7 -    132029 TT--GCA----T-------A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10600  7 -     16345 TT--GCA----T-------A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16485  7 +     22201 TT--GCA----T-------A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414706  7 -  22158432 TT--GCA----T-------A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26883  7 -     54323 TT--GCA----T-------A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199026  7 +   9404916 TT--GTA----T-------A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93638997 14 + 196305487 AT--GTA----TGTAGTATA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1600 14 -      9413 AT--GTA----TGTAGTATA
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566380 14 - 199412804 AT--GTA----TGTAGTATA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557691  7 -   3988456 TT--GTA----T-------G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055834  7 -  11899542 TT--GTA----T-------A
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452694  7 +   2017862 TT--GTA----T-------A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437099  7 -    630418 TT--TTA----T-------A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15294  7 +    150152 TT--GTA----T-------A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93559  1 -    140218 -------------------A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Orcinus_orca.KB316932.1                                  8103427  7 +  10937097 tt--gta----t-------a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                453  7 +     11607 TT--CTA----T-------A
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104425 11 - 174332312 TT--GTATGTAT-------G
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40069  7 +    559221 TT--GTG----T-------A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41548 14 -     51505 AT--GTA----GGTAGTCTA
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354551 14 +   1103335 AT--GTA----TGTAGTCTA
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405004  7 -  44047080 TT--GTA----T-------A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5523  7 +     17875 TT--GTA----T-------A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473599  7 - 189151597 TT--GCA----T-------A
i Pan_troglodytes.CM009242.2                             I 38 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25289  9 -    230217 TTTTTTA----T-------A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462615  9 -  18783137 TTTTTTA----T-------A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973274  9 +   8748460 TTTTTTA----T-------A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616532  7 +   2937107 TT--GTA----T-------A
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244231  7 - 183742232 TT--GCA----T-------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10693  7 +     21308 TT--GCA----T-------A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293266  7 -  20919399 TT--GCA----T-------A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23341  7 -     27687 TT--GCA----T-------A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16487  7 +     16796 TT--GCA----T-------A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23298  7 -     23640 TT--GCA----T-------A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15869  9 +     78924 TGTTTTA----T-------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27878 14 +     31479 AT--GTA----TGTCGTATA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20246 14 -     24908 AT--GTA----TGTCGTATA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2683  7 +      9367 TT--GTA----T-------A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32729  7 -     56120 TT--GTA----C-------A
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               4953  7 -     63832 TT--GTA----T-------A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3520  7 +     55023 TT--GCA----T-------A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3058  7 -     89929 TT--GCA----T-------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3648  7 +     40849 TT--GCA----T-------A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255323  7 +  14605196 TT--GCA----T-------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4815  2 +     22231 TC------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65638  7 +    207309 CT--GCC----T-------A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6730  7 -     25401 CT--GCC----T-------A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32474  7 +     58159 CT--GCC----T-------A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32750  7 +     63561 CT--GCC----T-------A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32510  7 +     51148 CT--GCC----T-------A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557480  7 -   4542175 CT--GCC----T-------A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32494  7 +     51125 CT--GCC----T-------A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1970  7 +     19503 TT--GTA----T-------A
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8912  7 +     39866 TT--GCC----T-------A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          3994  7 -      9282 TT--GCC----T-------A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43398  7 -     87950 TT--GCC----T-------A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43792  7 -     88961 TT--GCC----T-------A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8490  7 -     39403 TT--GCC----T-------A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43441  7 +     87928 TT--GCC----T-------A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8489  7 -     60166 TT--GCC----T-------A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15426  7 -     67232 TT--GCC----T-------A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43342  7 -     90634 TT--GCC----T-------A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44809  7 +     89403 TT--GCC----T-------A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178709  7 - 189387572 TT--GCA----T-------A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193526  7 -   9816681 TT--GCA----T-------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28668  7 +     69807 TT--GCA----T-------A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45849  7 -     80239 TT--GCA----T-------A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 4993  7 +      7663 TT--GTC----T-------C
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983424  7 +   4620579 AT--GTA----T-------A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566934  7 -   2598838 AT--GTA----T-------A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4572  7 -      7103 AT--GTA----T-------A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5169  7 -     11706 AT--GTA----T-------A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8906  7 -     30655 AT--GTA----T-------A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35220  7 +     46564 AT--GTA----T-------A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95499  7 -     98465 AT--GTA----T-------A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9138  7 +     35169 AT--GTA----T-------A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38458  1 +     52041 -------------------A
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            52967  7 -     66298 TG--GTA----T-------A
i Pteronotus_parnellii.KE847780.1                        I 7 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5479  7 -     18639 CT--GTA----T-------A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841565  7 -  28871421 TT--GTT----T-------A
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538080  7 -   4952924 TT--GTT----T-------A
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099931  9 +  38429054 TTTTTTA----T-------A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28038  7 +     91421 TT--GCA----T-------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154522  7 -   7812017 TT--GCA----T-------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8895  7 +     72585 TT--GCA----T-------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54016  7 +     55069 TT--TTA----T-------A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023741  1 -  90668790 -------------------A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915545  7 +   3329780 TT--GTA----T-------A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2623  7 +      7119 TT--GCA----C-------A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123239  7 + 195417433 TT--GCA----C-------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237465  7 -   7961872 TT--GCA----C-------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76064  7 -    116970 TT--GTT----T-------A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4793  7 +     27962 TC--GCC----T-------C
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4687  7 +      6077 TC--GCC----T-------C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4777  7 +      5971 TC--GCC----T-------C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4698  7 +      5932 TC--GCC----T-------C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3040  7 -      4390 TC--GCC----T-------C
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392477  7 - 209938924 TC--GCC----T-------C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4646  7 +      5979 TC--GCC----T-------C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1216  7 -     22275 TC--GCC----T-------C
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8692  7 +     16473 TT--GTA----T-------A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109813  6 + 121099817 TT---CC----T-------G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31380  6 -     47369 TT---CC----T-------G
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31766  6 -     79414 TT---CC----T-------G
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28457  6 -     34454 TT---CC----T-------G
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15858  6 -     22428 TT---CC----T-------G
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31012  6 -     47109 TT---CC----T-------G
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239058  7 +   5703754 TT--GCC----T-------G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8648  7 +     21866 TT--GCC----T-------G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116709  5 +    313613 ----GTA----T-------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26364  7 +     27374 TT--GCA----T-------A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29876  7 +     58920 TT--GCA----T-------A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16374  7 -     45317 TT--GCA----T-------A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24032  7 -     42441 TT--GCA----T-------A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26710  7 -     29113 TT--GCA----T-------A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29785  7 -     48123 TT--GCA----T-------A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864978  7 -   1910179 TT--GTC----T-------A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672084  7 +  18376816 TG--GTA----T-------T
i Sorex_araneus.JH798187.1                               I 4 C 0
s Spermophilus_dauricus.KZ294078.1                         1869189  5 +   3870691 TT--GTA-------------
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7568  7 -     97271 CT--GTA----C-------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125705  9 +    196729 TTTCTTA----A-------A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644758  7 +  69701581 TT--ATA----T-------A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391965  7 +   1523678 TT--GCA----T-------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15138  7 +     22964 TT--GTA----T-------A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3543  7 +      5583 TT--GTA----T-------A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192447  7 +    199430 TT--GTA----C-------G
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106415  7 -    539355 TT--GTA----C-------G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1475  7 +      9917 TT--GTA----T-------A
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8273  7 +     20590 TT--GTA----T-------A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354217  7 - 186847797 TT--GCA----T-------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24903  7 -     33621 AC--GTA----C-------A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20530  7 -     31044 CT--GTG----G-------A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480968  7 -    610378 TT--GTG----T-------A
i Tonatia_saurophila.TonSau_scaffold_294                 I 7 C 0
s Trachypithecus_auratus.k141_1189070                        21909  7 +     26378 TT--GCA----T-------A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34585  7 -     78344 TT--GCA----T-------A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21234  7 +     25722 TT--GCA----T-------A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29541  7 -     62838 TT--GCA----T-------A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29585  7 +     46913 TT--GCA----T-------A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10394  7 -     28527 TT--GCA----T-------A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31476  7 -     64340 TT--GCA----T-------A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29514  7 -     63452 TT--GCA----T-------A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10961  7 +     22490 TT--GCA----T-------A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4384  7 -      6147 TT--GCA----T-------A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11297  7 -     13050 TT--GCA----T-------A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256527  7 -   6242583 TT--GCA----T-------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2555  7 +     19340 TT--GCA----T-------A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174301  7 -    200418 TT--GTA----T-------A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482364  7 -  10818551 TT--GCA----T-------A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835204  7 -   4065304 TT--GTA----T-------G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9224  7 -     70247 TT--GTA----T-------G
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366540  7 -  33153633 TT--GTA----T-------A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4421  5 -     21056 ----GCA----T-------G
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182869  7 +   5085361 TT--GTA----T-------A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26080  7 -     30710 AT--GTA----T-------A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24987  7 -    147434 AT--GTA----T-------A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77127  7 +   5488506 TT--GTG----T-------A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105792  7 -    112863 TT--GTA----T-------A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174952  5 -    224448 TT--GTA-------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29902  7 -     86975 TT--ATA----T-------A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       830  7 -      1899 TT--GTA----T-------A
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1824  7 +      2126 TT--GTA----T-------A
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922  6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549  6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339  6 -     41509 I
e Noctilio_leporinus.NocLep_scaffold_7894                   128981  0 -    149072 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6262 63 +     36723 TGT--ACA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACGTT-AGAAAT-G-A
s Acinonyx_jubatus.LLWD01001279.1                           813682 63 +   1699592 TGT--TCA-CTG-AAATGCT-TTAACA----A---A-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-TCGTATC-AGAAAC-G-G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26050 37 +     63021 CAT--TCA-CTG-AGATTCT-CTA---AGG-T---T-ACTT-GTAA---TTTT-------------------------G----------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 26
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416140 63 +  29979442 TGT--TCA-TTG-AAATGCT-TTAACA----A---A-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCATATC-AGAAAT-G-G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216502 40 +    347723 -----------------------------------A-GCAC-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCGTATC-AGAAAT-G-G
i Ailurus_fulgens.LNAC01001112.1                         I 22 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19065 34 -     61208 ---------------------------------------TT-GGGA---GCTT-------------------------G-----G---T-AC--T-C---TCT--G-CCAAGTC-A--AGT-G-A
i Allactaga_bullata.AllBul_scaffold_20030                I 15 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48907 63 +     53615 TGT--TCA-TCA-AAGTGCG-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                           938 63 +     13857 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17489 63 -     21945 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19174 63 +     32033 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73006 63 -     84148 TGT--TCA-TCG-AAATGCT-TTAGTA----A---T-AGTT-GCAA---ATTT-------------------------G-----G---T-AGT-T-A---TCC--G-CCAAGTC-AGAAAT-G-A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45245 63 -     78289 TGT--TCA-TCG-AAATGCT-TTAGTA----A---T-AGTT-GCAA---ATTT-------------------------G-----G---T-AGT-T-A---TCC--G-CCAAGTC-AGAAAT-G-A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44684 63 +     55831 TGT--TCA-TCG-AAATGCT-TTAGTA----A---T-AGTT-GCAA---ATTT-------------------------G-----G---T-AGT-T-A---TCC--G-CCAAGTC-AGAAAT-G-A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43134 63 -     64179 TGT--TCA-TCG-AAATGCT-TTAGTA----A---T-AGTT-GCAA---ATTT-------------------------G-----G---T-AGT-T-A---TCC--G-CCAAGTC-AGAAAT-G-A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            241 63 -      3959 TGT--TCA-TCG-AAATGCT-TTAGTA----A---T-AGTT-GCAA---ATTT-------------------------G-----G---T-AGT-T-A---TCC--G-CCAAGTC-AGAAAT-G-A
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             41759 63 +     45454 TGT--TCA-TCG-AAATGCT-TTAGTA----A---T-AGTT-GCAA---ATTT-------------------------G-----G---T-AGT-T-A---TCC--G-CCAAGTC-AGAAAT-G-A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47408 63 +     70886 TGT--TCA-TCG-AAATGCT-TTAGTA----A---T-AGTT-GCAA---ATTT-------------------------G-----G---T-AGG-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9581 63 +     30854 TGT--TCA-TCA-AAATGCT-TTAGTA----A---T-AGTT-GCAA---ATTT-------------------------G-----G---T-AGT-T-A---TCC--A-CCAAGTC-AGAAAT-G-A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33715 63 +     42133 TGT--TCA-TCG-AAATGCT-TTAGTA----A---T-AGTT-GCAA---ATTT-------------------------G-----G---T-AGT-T-A---TCC--G-CCAAGTC-AGAAAT-G-A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586144 63 +   2318259 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---C-TGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      177938 63 -    412891 GGT--TC-ATTG-AAACGCT-TTAACA----A---T-GCTT-G---TGGTTTT-------------------------C-----A---T-AGT-T-A-----CTTG-TCGTAT-CGGAAAT-A-G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51251 63 -     68529 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----A---T-TGT-T-A---TCT--G-CCGTATC-AGAAAT-G-G
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    1973 63 +     17741 TAT--TCA-TCG-AAGTGCT-TTACTG----A---C-TGTT-GCGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2598 63 -     15923 TGT--TCA-TCG-AAGTGCT-TTACTG----A---C-TGTT-GCGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672880 63 +   5030052 TGT--TCA-TCG-AAGTGCT-TTACTG----A---C-TGTT-GCGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2874 63 -     16391 TGT--TCA-TCG-AAGTGCT-TTACTG----A---C-TGTT-GCGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2433 63 -     17186 TGT--TCA-TCG-AAGTGCT-TTACTG----A---C-TGTT-GCGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      16980 40 -     32367 -----------------------------------T-GCTT-GTGA---GTTT-------------------------G-----A---T-AGT-T-G---TCT--G-CCACATC-AGAAGT-G-A
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 22 C 0
s Arctocebus_calabarensis.k141_1364444                       21045 36 -     45910 TGT--TCA-CAG-AAATGCT-TTGATG----A---T-GCTC-ATGA---TTTG------------------------------------------------------------------------
i Arctocebus_calabarensis.k141_1364444                   C 0 I 26
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6204 64 -     15198 GGT--TC-ATGG-AAACGCT-TTAACA----A---T-GCTT-G---TGGTTTG-------------------------C-----A---T-AGT-TAA-----CTTG-TCATAT-CAGAAAT-A-G
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275471 63 +  21539123 TGT--TCA-TCG-AAGTGCG-TTAGTA----A---C-AGTT-GCAA---ATTT-------------------------G-----G---T-AGC-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11639 63 +     48076 TGT--TCA-TCG-AAGTGCG-TTAGTA----A---C-AGTT-GCAA---ATTT-------------------------G-----G---T-AGC-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6774 63 -     28759 TGT--TCA-TCG-AAGTGCG-TTAGTA----A---C-AGTT-GCAA---ATTT-------------------------G-----G---T-AGC-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34328 63 +     44353 TGT--TCA-TCG-AAGTGCG-TTAGTA----A---C-AGTT-GCAA---ATTT-------------------------G-----G---T-AGC-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49699 63 -     71267 TGT--TCA-TCG-AAGTGCG-TTAGTA----A---C-AGTT-GCAA---ATTT-------------------------G-----G---T-AGC-T-A---TCT--G-CCAAGTC-AGAAGT-G-A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23757 63 -     33135 TGT--TCA-TCG-AAGTGCG-TTAGTA----A---C-AGTT-GCAA---ATTT-------------------------G-----G---T-AGC-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7046 64 +     11645 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----A---TTAGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7054 64 -     19611 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----A---TTAGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964283 63 -  23207421 TGT--TAG-TTG-AAATGCT-TTCACA----A---T-GCTT-GTGA---TTTT-------------------------G-----C---T-AGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          783 63 -     25979 TGT--TAG-TTG-AAATGCT-TTCACA----G---T-GCTT-GTGA---TTTT-------------------------G-----C---T-AGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87152 63 +    124022 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---C-TGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22694 63 +    288883 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---T-TGT-T-A---TCT--G-CCGTATC-AGAAAT-G-G
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357084 63 +  48749331 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---T-TGT-T-A---TCT--G-CCGTATC-AGAAAT-G-G
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755648 63 +   1948126 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---T-TGT-T-A---TCT--G-CCGTATC-AGAAAT-G-G
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545790 63 -  45695690 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---T-TGT-T-A---TCT--G-CCGTATC-AGAAAT-G-G
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530805 63 -   4408762 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---T-TGT-T-A---TCT--G-CCGTATC-AGAAAT-G-G
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8647 63 +     28062 CGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAG---TTTC-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  43941 63 -     91139 CGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAG---TTTC-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21467 63 +     95584 CGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAG---TTTC-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21380 63 +    119600 CGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAG---TTTC-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            10952 62 +     18648 TGT--TCA-TCG-AAGTGCT-CTACTG----A---C-ACTC-GCGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCGAATC-AGAA-T-G-A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10485 47 -     13885 -------------------G-TCACTG----A---C-ACTT-GCGA---TTTT-------------------------G-----G---T-AGC-T-A---TCT--G-CCGGGTC-ACAA-T-G-A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2557 62 -      8861 TGT--TCA-TCA-AAGTGCT-CTACTG----A---C-ACTC-GCGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAATC-AGAA-T-G-A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165454949 62 + 189096842 TGT--TCA-TCA-AAGTGCT-CTACTG----A---C-ACTC-GCGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAATC-AGAA-T-G-A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2472 62 +      8664 TGT--TCA-TCG-AAGTGCT-CTACTG----A---C-ACTC-ACGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAATC-AGAA-T-G-A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631800 63 +  17673402 TGT--TAG-TTG-AAATGCT-TTAAGA----G---T-GCAT-GTGA---TTTT-------------------------A-----G---T-AGT-T-A---TCT--G-CCGTATC-AGAAAT-G-G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666087 63 +   7040546 TGT--TAG-TTG-AAATGCT-TTAAGA----G---T-GCGT-GTGA---TTTT-------------------------A-----G---T-AGT-T-A---TCT--G-CCGTATC-AGAAAT-G-G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209746 63 +   1652518 TGT--TAG-TTG-AAATGCT-TTAAGA----G---T-GCAT-GTGA---TTTT-------------------------A-----G---T-AGT-T-A---TCT--G-CCGTATC-AGAAAT-G-G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506168 62 +  60362399 TGT--TCT-TTG-AAATGCT-TTAACA----G---A-GCAT-GTGA---TTTG-------------------------G-----A---T-AGT-T-A---T-T--G-CCATATC-AGAAAA-G-G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9804 62 -     23171 TGT--TCT-TTG-AAATGCT-TTAACA----G---A-GCAT-GTGA---TTTG-------------------------G-----A---T-AGT-T-A---T-T--G-CCATATC-AGAAAA-G-G
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223147 62 +   9314153 TGT--TCT-TTG-AAATGCT-TTAACA----G---A-GCAT-GTGA---TTTG-------------------------G-----A---T-AGT-T-A---T-T--G-CCATATC-AGAAAA-G-G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616282 62 +  59632846 TGT--TCT-TTG-AAATGCT-TTAACA----G---A-GCAT-GTGA---TTTG-------------------------G-----A---T-AGT-T-A---T-T--G-CCATATC-AGAAAA-G-G
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107863 62 -  63665305 TGT--TCT-TTG-AAATGCT-TTAACA----G---A-GCAT-GTGA---TTTG-------------------------G-----A---T-AGT-T-A---T-T--G-CCATATC-AGAAAA-G-G
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409873 63 -  46296322 TGT--TAG-TTG-AATTGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---C-TGT-T-A---CCT--G-CTGTATC-AGAAAT-G-G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592147 63 +  44709034 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---C-TGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    312 63 -      1607 TGT--GCA-TTG-CAGTGCT-GTAATA----A---T-ACTT-GCGA---TGTG-------------------------G-----G---C-AGT-A-A---TCT--G-TGAAATC-AGAAAT-G-G
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271250 66 +    496798 TGT--TCA-CTG-AAATGCC-TTAGCA----G---T-ACTT-ACGA---TTTT-------------------------G-----G---T-GGT-A-GAGTTCT--G-CCAAGTT-CGACAT-A-G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1063 63 +      9923 GGC--TC-ATTG-AAACGCT-GTAACA----G---T-GCTT-G---TGGTTTT-------------------------C-----A---T-AGT-T-A-----CTTG-TCATAT-TGGAAAT-G-G
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28453 63 -     39886 CAT--ACA-TTA-AAATGCT-TTACTA----A---T-ACTT-GTGA---CATT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-T-A
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80346 64 -    217609 TGT--TAG-TTG-AAATGCT-TTAATA----A---TTTCTT-GTGA---TTGT-------------------------G-----G---T-AGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997182 63 +  23392119 CAT--TCA-TTG-NNNNNNN-NNNNNN----N---N-NNNN-NNNN---NNNN-------------------------N-----N---N-NNN-N-N---NNN--N-NNAAGCC-AGAAAT-G-G
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000623 63 +  23407841 CAT--TCA-TTG-AAATGTT-CTACTA----A---C-ACTT-GTCA---TGTG-------------------------G-----G---T-TGT-T-G---TCT--G-TCAAGCC-AGAAAT-G-G
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63704 63 -     66877 CAT--TCA-TTG-AAATGTT-CTACTA----A---C-ACTT-GTCA---TGTG-------------------------G-----G---T-TGT-T-G---TCT--G-TCAAGCC-AGAAAT-G-G
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5870 61 -     12580 TGT--TCA-TCG-AAGTGC--CTACTG----A---C-ACTC-GCGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCGAATC-AGAA-T-G-A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43927 62 +     53515 TGT--TCA-TCG-AAGTGCT-CTACTG----A---C-ACTC-GCGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCGAATC-AGAA-T-G-A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373691 68 -  26074798 CGA--TCA-TCG-AAGTGCT-TTGCTG----A---C-AGTT-GTGA---TTTT-------------------------GATACTG---T-AGT-T-A---TCT--G-CTGAGTC-AGAAAC-G-A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8745 68 -     34880 CGA--TCA-TCG-AAGTGCT-TTGCTG----A---C-AGTT-GCGA---TTTT-------------------------GATACTG---T-AGT-T-A---TCT--G-CTGAGTC-AGAAAC-G-A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67841 68 -     89041 CGA--TCA-TCG-AAGTGCT-TTGCTG----A---C-AGTT-GCGA---TTTT-------------------------GATACTG---T-AGT-T-A---TCT--G-CTGAGTC-AGAAAC-G-A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3210 66 -      5494 TGT--TCA-CTG-AAATGCC-TTAGCA----G---T-ACTT-ACGA---TTTT-------------------------G-----G---T-GGT-A-GAGTTCT--G-CCAAGTT-CGACAT-A-G
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15492969 63 -  27778364 TGT--TCA-TTG-AAAAGCT-TTAACA----G---T-GCTT-GTGA---TTTT-------------------------G-----G---T-AGG-T-A---TTT--G-CTATATC-AGAAAT-G-G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19802 63 +     27315 TGT--TCA-TTG-AAAAGCT-TTAACA----G---T-GCTT-GTGA---TTTT-------------------------G-----G---T-AGG-T-A---TTT--G-CTATATC-AGAAAT-G-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142056 62 -   4669795 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45800 62 +     47900 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1228 62 -     14410 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45612 62 -    148725 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27821 63 -     40656 TGT--TCG-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7785 63 +     20796 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12903 63 -     17524 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28626 63 -     34525 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12406 63 -     25376 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  364993 63 -  39242232 TGT--GCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270720 63 +  21565898 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33088 63 -     45857 TGT--TCA-TCC-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       27989 63 -     32606 TGT--GCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4151 63 +      8499 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26547 63 +     70610 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23508 63 +     36323 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---CCT--G-CCAAGTC-AGAAAT-G-A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13458 62 -     19938 CGC--CCA-CTC-AAATGCT-TT-ACA----G---T-GCTT-GAGG---TTTG-------------------------G-----G---T-AGT-T-A---CCT--G-CCAACTC-AGAAAC-G-A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31420 63 -     33796 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCTAGTC-AGAAAT-G-A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5934 63 -     15404 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9754 63 -     32913 TGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTAT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20167 63 -     40346 TGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTAT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20422 63 +    216457 TGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTAT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20215 63 +     39636 TGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTAT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239554 54 -   2543920 CAT--TCA-TTG-AAATGCT-TTAATA----A---T-ACTT-GTAA---TGTG-------------------------G-----G---T-AGT-G-G---TCT--G-GCAGGT------------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4802 63 +      5346 TGT--TCA-TCG-AAGGGCT-TTACTG----A---C-ACTT-GCGA---TTTT-------------------------G-----G---T-AGT-C-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43278 63 -    112038 CGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAG---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8829 63 +     34062 CGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAG---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344409 63 +  18827391 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       10951 63 -     44032 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305734 63 - 135778131 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15590 63 +     15858 TGT--TTA-CTG-AAATACT-TTAACA----A---T-GCTT-GTGG---TTTG-------------------------G-----G---T-AGT-T-C---TCT--G-CCAACTC-AGAAAT-G-A
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607165 63 -    839153 TGT--TTA-CTG-AAATACT-TTAACA----A---T-GCTT-GTGG---TTTG-------------------------G-----A---T-AGT-T-C---TCT--G-CCAACTC-AGAAAT-G-A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2303 63 +      2406 TGT--TCA-TTG-AAACATT-TTAACA----A---T-GCGT-GTGC---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAACTC-AGAAAC-A-G
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             410139 63 -   2368649 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380020 63 - 200372422 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3577 63 -     84244 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808020 62 +  53390261 TGT--TAG-TCA-AAATGCT-TTAACA----A---T-GCTT-ATGG---CTTT-------------------------A-----G---T-AGC-T-A---TCT--G-C-ATAAA-AGAAAT-G-G
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3550 63 -      8242 TGT--TCA-CTG-AAGTGCT-TTAACA----A---T-GCTA-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TTT--G-CTGTATC-AGAAAT-G-G
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44953 34 -     83289 CAT--TCA-CAG-AAATTCC-CTA-------A---T-ATTT-GCAA---TCTT-------------------------G----------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 1
s Cricetulus_griseus.LT883664.1                          213115628 61 - 224834208 TGT--TCA-CCG-GAATTC--CTA-------ACGAT-ACTT-ATGG---TTTGGGTTACTTTTTGCTGTGTTGTAAGTG----------------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_77846              10637 57 +     12657 TAC--TCTTT-A-CAGTTAT-TTAGCA----A---T-TGTT-G--A-----TT-------------------------G-----G---T-AGT-T-A---T----A-ACATATT-AGAAAT-T-T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5131 63 +     87169 TGT--TCA-CTG-AAATGCT-TTAACA----A---A-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCATATC-AGAAAC-G-G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646184 60 -   1526836 TAT--TCA-TTG-AAATAGT----AAA----G---C-AGAT-ATGA---TTTT-------------------------G-----G---T-ATT-T-C---TCT--C-CTAAGTC-AGAAAT-A-G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19223 63 +     50838 CAT--GCA-TTG-AAATGCT-GTAATA----A---T-GCTT-GTGA---CGTG-------------------------G-----G---T-AGT-A-A---TCT--G-TTAAGTC-AGAAAT-G-G
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 156
s Cuniculus_paca.CunPac_flattened_line_7025                   5109 63 +     36344 CAT--TCA-TTG-AAATGCT-TTGATA----A---T-ACTT-GTCA---TGTG-------------------------G-----A---T-AGT-A-T---TCT--G-TCAAGTC-AGAAAT-G-G
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28886 63 +     75252 CAT--TCA-TTG-AAATGCT-TTAATA----G---T-ATTT-GTCA---TGTG-------------------------G-----G---T-AGT-A-G---TCG--G-TCAAGTC-AGAAAT-G-G
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110810 61 -   2246927 TGC--TCG-TGC-AAATGCT-TTAACG----G---T-G--T-GTGG---TTTG-------------------------G-----G---T-AAT-T-A---TCT--G-CCAGCTC-GGAAAA-G-A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293356 63 +  12879189 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCATGTC-AGAAAT-G-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632691 63 -  35494412 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----C---T-AGT-T-A---TCT--G-CTGTATC-AGAAGT-G-G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866127 44 -  20541912 GGT--TC-ATTG-AAATGCT-TTAACA----A---C-GCTT-G---TGGTTTG-------------------------G-----G---T-AGT-T-A----------------------------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665253 63 -   1390856 TGT--TCA-TTG-AAAAGCT-TTAACA----G---T-GCTT-GTGA---TTTT-------------------------G-----G---T-AGG-T-G---TTT--G-CTATAGC-AGAAAT-G-G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140046 39 -    198055 TGT--TCA-TTG-AAAAGCT-TTAACA----G---T-GCTT-GTGA---TTTT-------------------------G-----G---T------------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 20
s Dinomys_branickii.DinBra_scaffold_10381                    99636 54 -    115145 CAT--TCC-TTG-AAATGCT-TTAATA----A---T-ACTT-GTGA---TGTG-------------------------G-----G---T-TGT-G-A---TCT--G-TCAGGC------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951346 63 -  37912305 tat--tta-ttgaaaatgcT-TTAATA----A---T-ACTT-GTGA---T-TT-------------------------G-----G---T-AGT-T-G---TCT--G-CCAAGCC-AGAAAT-C-T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6278 62 -     10735 TAT--TTA-TTG-AAATGCT-TTAATA----A---T-ACTT-GTGA---T-TT-------------------------G-----G---T-AGT-T-G---TCT--G-CCAAGCC-AGAAAT-C-T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856303 64 - 111700974 CGC--TCA-TGG-AAATGCT-TTCCCA----G---T-ACCT-GTGC---TTCC-------------------------G-----G---T-TGCTT-C---TCG--G-CTAACTC-AACACC-G-G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7032 67 +     19438 TGT--TCA-TTG-AAATGCT-TGAACA----ATGCT-AGTTAGTGG---TTTT-------------------------G-----G---T-AGT-T-A---TTT--G-CCATATC-AGAAAT-A-G
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240510 63 -    607251 tgt--taG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---T-TGT-T-A---TCT--G-CCGTATC-AGAAAT-G-G
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226523 63 +  10337057 tgt--tca-tta-aaatatt-ttaaca----a---t-gtAT-GTGA---TTTG-------------------------G-----G---T-AGT-T-A---TCT--G-CCAACTC-AGAAAT-G-G
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31764 62 +    110024 CTT--TCC-TCA-AATATCC-CTA-------ACAAT-TCTT-GTGG---TTTTGGTTACTTTTTGCTGTGTTGTAAGTA----------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 1
s Ellobius_talpinus.LOJH01026522.1                           13735 62 +     18970 CTT--TCC-TCA-AATATCC-CTA-------ACAAT-TCTT-GTGG---TTTTGGTTACTTTTTGCTGTGTTGTAAGTA----------------------------------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               24916891 63 +  41312741 TGT--TAA-TTG-AAATACT-TTAACA----A---A-GTAT-GTGA---TTTC-------------------------G-----A---T-AGT-T-A---CCT--G-CCATATC-AGAAAT-A-G
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579673 62 +  14770903 TGT--TCA-TAA-AAGTGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TTT--G-TCATAG--AGAAAT-A-G
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042174 63 -   4378816 TGT--TCT-TTG-AAAAGCT-TTCATG----A---T-GATT-GTAA---TTTT-------------------------G-----G---T-AGG-T-A---TCT--G-CCATATC-AGAAAT-G-G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376112 63 +  39960074 TGT--TCT-TTG-AAAAGCT-TTCATG----A---T-GATT-GTGA---TTTT-------------------------G-----G---T-AGG-T-A---TCT--G-CCATATC-AGAAAT-G-G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412094 63 -    498745 TGT--TCT-TTG-AAAAGCT-TTCATG----A---T-GATT-GTGA---TTTT-------------------------G-----G---T-AGG-T-A---TCT--G-CCATATC-AGAAAT-G-G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666804 62 +   7059049 -GT--AAT-C-A-AAGTGTT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-T---TCT--TTCCATATT-ATAAAT-A-G
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               263945 63 +  21539334 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71897 63 -    133382 TGT--TAG-TTG-AAATGCT-TTCACA----A---T-GCTT-GTGA---TTTT-------------------------G-----C---T-AGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              484 63 -      1072 TGT--TAG-TTG-AAATGCT-TTCACA----G---T-GCTT-GTGA---TTTT-------------------------G-----C---T-AGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15561 63 -     24895 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--A-CCAAGTC-AGAAAT-G-A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43271 63 -     70999 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--A-CCAAGTC-AGAAAT-G-A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87241 63 +    112731 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACGT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43803 63 +     68309 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54128 63 -     65740 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--A-CCAAGTC-AGAAAT-G-A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24760 63 -     75513 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 48955 63 -     97555 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5679 63 +     30972 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACGT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43399 63 -     52037 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--A-CCAAGTC-AGAAGT-G-A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59802 63 -    111500 TGT--TCA-TGG-AAATGCT-TTAACA----G---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--A-CCAAGTC-AGAAAT-G-A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247592 63 - 206538554 TGT--TCA-CTG-AAATGCT-TTAACA----A---A-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-TCATATC-AGAAAC-G-G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117378 63 - 205367284 TGT--TCA-CTG-AAATGCT-TTAACA----A---A-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-TCATATC-AGAAAC-G-G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28475 63 -     30238 TGT--TCA-CTG-AAATGCT-TTAACA----A---A-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-TCATATC-AGAAAC-G-G
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922757 42 -   3816255 CAT--TCA-TTG-AAATACT-TAAATA----G---T-ACCT-GTAG---TGTG-------------------------G-----GTAGT------------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 21
s Galago_moholi.ctg3793                                     126414 63 -    137831 TGT--TCA-CAG-AAATGAT-TTGATG----A---T-ACTC-ATAA---TTTG-------------------------A-----G---G-AGT-T-A---TCT--G-CCGAGTG-AGAAAT-G-A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             9959 63 +     22493 TGT--TCA-CAG-AAATGAT-TTGATG----A---T-ACTC-ATAA---TTTG-------------------------A-----G---G-AGT-T-A---TCT--G-CCGAGTG-AGAAAT-G-A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22029 63 -     32986 TGT--TCA-GAG-AAATGAT-TTGATG----A---T-ACTC-ATAA---TTTG-------------------------A-----G---G-AGT-T-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1931 63 -     28519 TGT--TCA-TTG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-G
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92217 63 -     95226 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----A---T-TGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            1596 63 -      6791 TAC--TCC-TTG-AAATGCT-TTAATA----A---T-ACTT-GTGA---TTTG-------------------------G-----G---T-AGT-T-A---CCT--G-CCAGATC-AGAAAT-G-A
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6562 63 -      8343 CGT--ACA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCATGTT-AGAAAT-G-A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255577 63 - 186649187 TGT--ACA-TCA-AAGTGCT-TTAGTG----A---T-AGCT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACGTT-AGAAAT-G-A
i Gorilla_gorilla.LT578341.1                             I 45 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2724 63 -     78134 TAC--TAC-TTG-AACTGCT-TTAATA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAGATC-AGAAAT-G-G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15490 63 -     40692 CGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36892 63 +     49394 CGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61760 63 -     66874 CGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10634 63 -     42923 CGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAC-G-A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17633 63 -     53142 CGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31573 53 -    327341 TGT--TCA-CTG-AGATGCT-TTAACA----A---A-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCCTA-------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9891 63 +     48891 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---C-TGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933170 42 -  22651954 CAT--TCA-TTG-AAATACT-CGAATA----A---T-ATCT-GTGG---TGTG-------------------------G-----GTAGT------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 21
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1009 63 +      8654 CGT--GCG-TTG-AGATGCT-TGAACA----G---G-GCAC-GTGA---TTTT-------------------------C-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-A-G
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8399 63 -     36432 CAT--TAG-TTG-AAATGCT-CTAACA----G---T-GCTT-GTGA---TTTG-------------------------G-----G---T-CGT-T-A---CCT--G-CCGTATC-ATAAAT-G-G
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552389 63 -   1711038 TGT--TCA-TTG-AAATGCT-TTAACA----A---T-GCTA-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TTT--G-CCATATC-AGAAAT-G-G
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1829 62 -      2730 TGT--TCA-TTG-AAATG-T-TTAAAA----A---T-GCTA-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TTT--G-CCATATC-AGAAAT-G-G
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143586 63 -    630532 TGT--ATA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACGTT-AGAAAT-G-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  70968 63 +     83186 TGT--TCA-CCG-AAATGCT-TTAACA----A---A-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCATATC-AGAAAC-G-G
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72632 63 +    143317 TAT--TCA-TCG-AAATGTT-TTACTA----A---C-GCTT-GTCA---TGTG-------------------------G-----G---T-AGT-T-G---CCT--G-TCAAGTC-AAAAAT-G-G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6620 63 +     12352 TGT--ATA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACGTT-AGAAAT-G-A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13804 63 +     55766 TGT--ATA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACGTT-AGAAAT-G-A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053404 63 + 191637585 TGT--ATA-TCA-AAGTGCT-TTGGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACGTT-AGAAAT-G-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802282 63 +  11177569 TGT--ATA-TCA-AAGTGCT-TTGGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACGTT-AGAAAT-G-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7919 40 -    135385 CAT--TCA-TTA-AAATGCT-TTAATA----A---T-ACTT-GTGA---TGTA-------------------------G-----G---T-G----------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 20
s Ictidomys_tridecemlineatus.JH393364.1                     387616 65 +   7955117 TACATtca-tta-aaatgct-ttaata----A---C-ACTT-GTGA---TACT-------------------------A-----G---T-AGT-T-A---TTT--G-CCAAGTA-GGAAGT-G-A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3190 63 +     11955 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTG-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10792 63 -     16823 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----C---G-ATT-T-A---TCT--G-CTGCATC-AGAAAT-G-G
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240895 34 +   9596543 ---------------------------------------TT-GTGA---ATTT-------------------------T-----G---T-AG--T-C---TTT--G-CCAAGTC-A--AGC-G-T
i Jaculus_jaculus.JH725527.1                             I 15 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72632 63 -     97402 TGT--TAG-TTG-AAATGCT-TTAACA----G---T-GCTT-GTGA---TTTT-------------------------G-----C---T-AGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44022 63 +    110728 TGT--TCA-TCG-AAGTGCG-TTAGTA----A---T-AGTT-GCAA---ATTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAGT-G-A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64004 62 -     65777 tGC--TCG-TTA-AAGTGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----A---T-GGT-T-A---TTT--G-TCACAG--AGAAAT-A-A
i Lasiurus_borealis.LasBor_scaffold_16567                I 351 C 0
s Lemur_catta.scaffold_24                                 14760283 63 +  30322482 CGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4924 63 -     13097 TGT--TCA-TCG-AAGGGCT-TCACTG----A---C-ACTT-GCGA---TTTT-------------------------G-----G---T-AGT-C-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4678 63 +      5940 TGT--TCA-TCG-AAGGGCT-TCAGTG----A---C-ACTT-GCGA---TTTT-------------------------G-----G---T-AGT-C-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4501 63 -      5717 TGT--TCA-TCG-AAGGGCT-TCACTG----A---C-ACTT-GCGA---TTTT-------------------------G-----G---T-AGT-C-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10892 62 -     11567 TGT--TCA-TCA-AAGCGCT-CTACTG----A---C-ACTT-GCGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCGAATC-AGAA-T-G-A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12273 62 -     12945 TGT--TCA-TCA-AAGCGCT-CTACTG----A---C-ACTT-GCGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCGAATC-AGAA-T-G-A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9795 63 +     29618 TGT--TCA-TGG-AAATGCC-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9791 63 +     31569 TGT--TCA-TGG-AAATGCC-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9801 63 +     24756 TGT--TCA-TGG-AAATGCC-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9801 63 +     16388 TGT--TCA-TGG-AAATGCC-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814273 63 -   3914936 TGT--TCA-TTG-AAATGCT-TTATCA----A---G-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCATATC-AGAAAT-G-G
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18636 63 +     24238 TAC--TCA-TTG-GAATGCC-TTAATA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---CCT--G-GCAAGTC-AGAAAC-A-G
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             341977 63 +    662738 TGT--TAG-TTG-AAATGCT-TTTACA----A---T-GCCT-GTGA---TTTT-------------------------G-----C---T-AGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               334941 62 -   1826925 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12112 63 +     19643 TGT--TCA-CAG-AAATGCT-TTGATG----A---T-ACTC-CTGA---TTTG-------------------------G-----G---G-AGT-T-A---TCT--G-CCGAGTC-AGAAAT-A-A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045782 63 -   6120653 TGT--TCA-CAG-AAATGCT-TTGATG----A---T-ACTC-CTGA---TTTG-------------------------G-----G---G-AGT-T-A---TCT--G-CCGAGTC-AGAAAT-A-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085678 63 +  43346337 TGT--TCA-CCG-AAATGCG-TGAACA----G---T-GCAC-GTGG---TTCT-------------------------G-----G---T-AGT-G-A---TCA--G-CCAGCTC-AGAAAT-G-G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615437 62 +  59628241 TGT--TCT-TTG-AAATGCT-TTAACA----G---A-GCAT-GTGA---TTTG-------------------------G-----A---T-AGT-T-A---T-T--G-CCATATC-AGAAAA-G-G
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46330 62 -     61512 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 373992 62 -  60120075 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26260 62 +     30207 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1098 62 -      5035 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26213 62 +     30527 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GTAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37389 62 -     50087 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47133 62 +     51645 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416336 62 - 187317192 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400566 62 +  25927173 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49738 62 -     62418 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2269 62 +     14901 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46210 62 +     59329 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272118 62 +    668171 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   756 62 -      5049 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3916 62 +     17132 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224000 67 -    270270 TGT--TCA-TTA-AAATGCT-TGAATA----ATGCT-ACTTAGTGA---TTTT-------------------------G-----G---T-AGT-T-A---TTT--G-CCATATC-AGAAAT-G-G
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323406 62 +  24302211 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358237 62 -    752769 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674323 63 -    737560 TGT--TCA-CTG-AGGTGCC-CTAACA----G---T-GCTT-GTTG---TCTC-------------------------G-----G---T-CAT-T-A---TCT--G-CCAGATC-AGAAAT-G-G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221623 63 +    317179 TGT--TCA-TTG-AGGTGCC-CTAACA----G---T-GCTT-GTTG---TCTC-------------------------C-----G---T-CGT-T-A---TCT--G-CCAGATC-AGAAAT-G-G
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501830 65 +  40650429 TACATTca-tta-aaatgct-ttaata----a---t-ACTT-GTGA---TACT-------------------------G-----A---T-AGT-T-A---TTT--G-CCAAGTA-GGAAGT-G-A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151169 63 +    207569 TGT--ACA-TTG-AAGTGCT-TTAACA----A---T-GCTA-GTGA---TATG-------------------------G-----A---T-AGT-T-A---TTT--G-CCATATC-AGAAAT-G-G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             26990 63 -     74585 TGT--TCA-TTG-AAATACT-TTAACA----A---A-GTAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---CCT--G-CCATATC-AGAAAT-A-G
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 50945 37 -    140813 CAT--TCA-CTG-GAATTTC-CCA---AGG-A---T-ACTT-GTGA---TTTT-------------------------G----------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 26
s Mesocricetus_auratus.KB708134.1                         17430011 62 +  29670104 AGT--TCA-CCG-GAATTCC-CTA-------GCAAT-ACTT-GTGG---TTTTGGTTACTTTTTGCTGTGTTGTAAGTG----------------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_6114                     88261 63 +     93471 TGT--TAG-TTG-AAATGCT-TTAACA----G---T-GCTT-GTGA---TTTT-------------------------G-----C---T-AGT-T-A---TCT--G-CTGTATG-AGAAAT-G-G
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11059 62 +     17804 TGT--TCA-TCG-AAGTGCT-CTACTG----A---C-ACTC-GCGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCGAATC-AGAA-T-G-A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11559 62 -     12984 TGT--TCA-TCG-AAGTGCT-CTACTG----A---C-ACTC-GCGA---TTTT-------------------------G-----G---C-AGT-T-A---TCT--G-CCGAATC-AGAA-T-G-A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19875 62 -     26561 TGT--TCA-TCG-AAGTGCT-CTACTG----A---C-ACTC-GCGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCGAATC-AGAA-T-G-A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985633 63 +  93316391 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47530 39 +    145209 CAC--CCC-CTG-GAATGTT-TTCCCA----A---G-ACCA-GGGC---AGCT-------------------------G-----G---T------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 5
s Micronycteris_hirsuta.MicHir_scaffold_2233                185857 63 +    200668 GGT--TC-ATTG-AAATGCA-TTAACA----A---T-GCTT-G---TAGTTTT-------------------------G-----G---T-AGT-T-A-----CTTG-TCATAT-CAGAAAC-A-G
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963206 61 +  27267610 CTT--TCC-CCA-AA-TTCC-CTA-------ACaat-tttt-gtgg---ttttgattaCTTTTTGTTGTGTTGTAAGTA----------------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 1
s Miniopterus_natalensis.LDJU01000034.1                    6364011 61 -   8254450 TGT--TCA-ATG-AAAGGCT-TTAACA----T---T-GCTT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TTT--G-TCATAC--AGA-AT-A-G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42918 61 -     48117 TGT--TCA-ATG-AAAGGCT-TTAACA----T---T-GCTT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TTT--G-TCATAC--AGA-AT-A-G
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23440 63 -     27822 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9284 63 +     27589 TGT--TCA-TTG-AAATGCT-TTATCA----A---G-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCATATC-AGAAAT-G-G
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53416 63 -     62432 TGT--TCA-TGG-AAATGCT-TTAAGA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360366 63 +    437263 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----C---T-AGT-T-A---TCT--G-CTGTATC-AGAAGT-G-G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180081 63 +    366855 TGT--TC-ACTG-AAGTGCT-TTAACG----A---T-GCTT-G---TGATATT-------------------------C-----G---T-AGT-T-A-----TTTG-TCATAT-CAGAAAT-A-G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26337 63 -     82753 TGT--TAG-TTG-AAATGCT-TTAGCA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---T-TGA-T-A---TCT--G-CCATATC-AGAAAT-G-G
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19298 63 -     63510 TGT--TCA-CTG-AGATGCT-TTAACA----A---A-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCCTATC-AGAAAC-G-G
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          39974 62 +     47283 TGT--CCA-TTA-AAATGCT-TTAACG----A---T-GCTT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TTT--G-TCATAG--AGAAAT-A-G
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35595081 37 + 120012414 CAT--TCC-CTG-AAATTAC-CTA---AGT-A---T-ACTT-GTGA---TGTT-------------------------G----------------------------------------------
i Mus_caroli.LT608237.1                                  C 0 I 26
s Mus_musculus.chr8                                       41688307 37 + 129401213 CAT--TCC-CTG-AAATTAC-TTA---AGA-A---T-ACTT-GTGA---TTTT-------------------------G----------------------------------------------
i Mus_musculus.chr8                                      C 0 I 26
s Mus_spretus.CM004101.1                                  39497601 37 + 130317789 CAT--TCC-CTG-AAATTAC-TTA---AGT-A---T-ACTT-GTGA---TTTT-------------------------G----------------------------------------------
i Mus_spretus.CM004101.1                                 C 0 I 26
s Muscardinus_avellanarius.MusAve_scaffold_12866             84282 63 -     86153 TAC--TGC-TTG-AAATGCT-TTAATA----A---T-AATT-GTCA---TTCT-------------------------G-----G---T-AGT-T-A---TCT--A-CCAGATC-AGAAAT-G-A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355912 63 +  14710649 TGT--TCA-TTG-AAATact-ttaaca----a---a-atat-gtaa---tttt-------------------------g-----a---T-AGT-T-A---CCT--G-CCATATC-AGAAAT-A-G
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63884 63 +     67721 CAT--GCA-TTG-CAGTGTT-GTAATA----A---C-ACTT-GTGA---TGTG-------------------------G-----A---T-AGT-A-A---TCT--G-TTAAGTC-AGAAAT-G-G
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794234 62 +  10118263 TGT--TCA-TTA-AAGTGCT-TTAACA----A---T-GCTT-GCAA---TTTT-------------------------G-----A---T-GGT-T-A---TTT--G-TCATAG--AGAAAT-A-G
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388407 62 +   6019432 TGT--TCA-TTA-AAGTGCT-TTAACA----A---T-GCTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TTT--G-TTATAG--AGAAAT-A-G
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384194 62 +   4330536 TGT--TCA-TTA-AAGTGCT-TTAACA----A---T-GCTT-GCAA---TTTT-------------------------G-----A---T-GGT-T-A---TTT--G-TCATAG--AGAAAT-A-G
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3228 62 +     18357 TGT--TCA-TTA-AAGTGCT-TTAACA----A---T-GCTT-GCAA---TTTT-------------------------A-----C---T-AGT-T-A---TTT--G-TCATAG--AGAAAT-A-G
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120559 63 +    130748 TGT--GCA-CTG-AAATGCT-TTAACA----A---T-GCAT-GTGG---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAACTC-AGAAAT-G-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947509 61 +   3037898 CAT--TCA-CTG-AAATGCC-CTAACA----A---C-ACTT-GCAA---T-Tt-------------------------g-----g---t-tgt-t-a---ttt--g-ccatgtc-ATAAGT-G--
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30096 63 +     34575 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233032 63 -   7148211 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----C---T-AGT-T-A---TCT--G-CTGTATC-AGAAGT-G-G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nomascus_annamensis.k141_1771965                           54512 63 -    132029 TGT--ATA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACGTT-AGAAAT-G-A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10607 63 -     16345 TGT--ATA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACGTT-AGAAAT-G-A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16492 63 +     22201 TGT--ATA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACGTT-AGAAAT-G-A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414713 63 -  22158432 TGT--ATA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACGTT-AGAAAT-G-A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26890 63 -     54323 TGT--ATA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACGTT-AGAAAT-G-A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199033 62 +   9404916 TGT--TCT-TTG-AAATGCT-TTAACA----G---A-GCAT-GTGA---TTTG-------------------------G-----A---T-AGT-T-A---T-T--G-CCATATC-AGAAAA-G-G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639011 63 + 196305487 TGT--TCA-CAG-AAATGCT-TTGATG----A---T-ACTC-CTGA---TTTG-------------------------G-----G---G-AGT-T-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1614 63 -      9413 TGT--TCA-CAG-AAATGCT-TTGATG----A---T-ACTC-CTGA---TTTG-------------------------G-----G---G-AGT-T-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566394 63 - 199412804 TGT--TCA-CAG-AAATGCT-TTGATG----A---T-ACTC-CTGA---TTTG-------------------------G-----G---G-AGT-T-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557698 62 -   3988456 TAT--TCA-CTG-GAATGTT-TTAATA----A---T-ACTT-GAGA---TTTT-------------------------G-----G---T-CGT-T-A---CCT--G-CCA-ATC-AAAAAT-G-G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11055841 62 -  11899542 CAT--GCA-TTG-AAATGCC-GTAATA----A---T-ACTT--TGA---TGTG-------------------------G-----G---T-AGT-T-A---TCT--G-TTAAGTC-AGAAAT-G-G
i Octodon_degus.JH651603.1                               C 0 I 147
s Odobenus_rosmarus.KB229312.1                             1452701 63 +   2017862 TGT--TCA-TTG-AAATACT-TTAACA----A---G-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCATATC-AGAAAT-G-G
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437106 63 -    630418 TGT--TAG-TTA-AAATGCT-TTAACA----T---T-GCTT-GTGA---TTTT-------------------------G-----C---T-TGT-T-A---TCT--G-CCGTATC-AGAAAT-G-G
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15301 63 +    150152 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----A---T-TGT-T-A---TCT--G-CCGTATC-AGAAAT-G-G
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93560 62 -    140218 TTT--TCA-CCA-AAATTCC-CTA-------ACAAT-TCTT-GTGG---CTTTTGTTACTTTTTGCTGTGTCGTAAGTA----------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 1
s Orcinus_orca.KB316932.1                                  8103434 63 +  10937097 tGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGa---tttt-------------------------g-----c---t-agt-t-t---ttt--t-ttgtaTC-AGAAAT-G-G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                460 63 +     11607 TGT--TCC-CTG-AAATGAT-TTAACA----A---T-ATAT-GTGA---TTTT-------------------------G-----G---T-AGG-T-A---TCT--G-CCAACTT-AGAAAT-G-G
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104436 63 - 174332312 TAC--TCA-TTG-GAATGCC-TTAATA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---CCT--G-GCAAGTC-AGAAAT-G-G
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40076 62 +    559221 TGT--TCT-TTG-AAATGCT-TTAACA----G---A-GCAT-GTGA---TTTG-------------------------G-----A---T-AGT-T-A---T-T--G-CCATATC-AGAAAA-G-G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41562 63 -     51505 TGT--TCA-CAG-AAATGAT-TTGATG----A---T-ACTC-ATAA---TTTG-------------------------A-----G---G-AGT-T-A---TCT--G-CCGAGCC-AGAAAT-G-A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354565 63 +   1103335 TGT--TCA-CAG-AAATGAT-TTGATG----A---T-ACTC-ATAA---TTTG-------------------------A-----G---G-AGT-T-A---TCT--G-CCGAGCC-AGAAAT-G-A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405011 63 -  44047080 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---C-TGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5530 63 +     17875 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---C-TGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473606 63 - 189151597 TGT--ACA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACGTT-AGAAAT-G-A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25298 63 -    230217 TGT--TCA-CTG-AAATGCT-TTAACA----A---A-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-TCATATC-AGAAAC-G-G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462624 63 -  18783137 TGT--TCA-CTG-AAATGCT-TTAACA----A---A-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-TCATATC-AGAAAC-G-G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973283 63 +   8748460 TGT--TCA-CTG-AAATGCT-TTAACA----A---A-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-TCATATC-AGAAAC-G-G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616539 63 +   2937107 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---C-TGT-T-A---TCT--G-ATGTATC-AGAAAT-G-G
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244238 62 - 183742232 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10700 62 +     21308 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTT-AGAAAT-G-A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293273 62 -  20919399 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23348 62 -     27687 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_799093                                    16494 62 +     16796 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Papio_papio.k141_799093                                C 0 C 0
s Papio_ursinus.k141_2278143                                 23305 62 -     23640 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Papio_ursinus.k141_2278143                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15878 63 +     78924 TGT--TCA-CTG-AAATGCT-TTAACA----A---A-GCAT-GTGA---TGTG-------------------------G-----A---T-AGT-T-G---TCT--G-CCATATC-AGAAAC-G-G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27892 36 +     31479 TGT--TCA-CAG-AAATGCT-TTGATG----A---T-ACTC-ATGA---TTTG------------------------------------------------------------------------
i Perodicticus_ibeanus.k141_1921260                      C 0 I 27
s Perodicticus_potto.k141_1854441                            20260 36 -     24908 TGT--TCA-CAG-AAATGCT-TTGATG----A---T-ACTC-ATGA---TTTG------------------------------------------------------------------------
i Perodicticus_potto.k141_1854441                        C 0 I 27
s Perognathus_longimembris.PerPac_flattened_line_89005        2690 62 +      9367 TAT--TAA-TTG-AATTGCT-TTAATA----A---T-ACTT-GTGG---T-TT-------------------------G-----G---T-GGT-T-A---TCT--G-CCAGGCC-AGAAAT-C-T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32736 39 -     56120 CAT--TCA-CTG-AAATGCT-TGAATG----A---T-GCCC-ACTG---GGGA-------------------------G-----C---G------------------------------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 21
s Phocoena_phocoena.PhoPho_flattened_line_24159               4960 63 -     63832 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----C---T-AGT-T-A---TCT--G-CTGTATC-AGAAGT-G-G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3527 63 +     55023 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3065 63 -     89929 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3655 63 +     40849 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255330 63 +  14605196 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4817 55 +     22231 ----------TA-AAGTGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TTT--G-TCATGG--AGAAAT-A-G
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65645 63 +    207309 TGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6737 63 -     25401 TGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGC-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32481 63 +     58159 TGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32757 63 +     63561 TGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32517 63 +     51148 TGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557487 63 -   4542175 TGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32501 63 +     51125 TGT--TCA-TCG-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            1977 63 +     19503 AGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----C---T-AGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8919 63 +     39866 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGCT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-GGAAAT-G-A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4001 63 -      9282 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGCT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCG--G-CCAAGTC-AGAAAT-G-A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43405 63 -     87950 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGCT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-GGAAAT-G-A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43799 63 -     88961 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGCT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-GGAAAT-G-A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8497 63 -     39403 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGCT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCG--G-CCAAGTC-AGAAAT-G-A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43448 63 +     87928 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGCT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-GGAAAT-G-A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8496 63 -     60166 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGCT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-GGAAAT-G-A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15433 63 -     67232 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGCT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-GGAAAT-G-A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43349 63 -     90634 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGCT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-GGAAAT-G-A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44816 63 +     89403 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGCT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-GGAAAT-G-A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178716 63 - 189387572 TGT--ACA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACATT-AGAAAT-G-A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193533 63 -   9816681 TGT--ACA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACATT-AGAAAT-G-A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28675 63 +     69807 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45856 63 -     80239 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5000 63 +      7663 CGT--GCG-TTG-AGATGCT-TGAACA----G---G-GCAC-GTGA---TTTT-------------------------C-----G---T-AGT-T-A---TTT--G-CCAAGTC-AGAAAT-A-G
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983431 63 +   4620579 CGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1566941 63 -   2598838 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4579 63 -      7103 TGT--TCA-TGG-AAATGCT-TTAACA----G---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5176 63 -     11706 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------A-----G---T-AGT-T-A---TCC--G-CCAAGTC-AGAAAT-G-A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8913 63 -     30655 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GCGA---TTTT-------------------------G-----G---T-AGT-T-A---TCC--G-CCAAGTC-AGAAAT-G-A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35227 63 +     46564 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------A-----G---T-AGT-T-A---TCC--G-CCAAGTC-AGAAAT-G-A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95506 63 -     98465 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9145 63 +     35169 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38459 37 +     52041 CAT--TCA-CTG-GAATTTC-CCA---AGG-A---T-ACTT-GTGA---TTTT-------------------------G----------------------------------------------
i Psammomys_obesus.NESX01036366.1                        C 0 I 26
s Pteronotus_parnellii.KE847780.1                            52974 63 -     66298 CGT--TC-ATTG-AAATGCT-TTAACA----A---T-GTTT-G---TGATTTG-------------------------G-----G---G-AGT-T-A-----TTTG-TCATAT-CAGAAAT-A-G
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5486 63 -     18639 TGT--TAA-TTG-GAATACT-TTAACA----A---A-GTGT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---CCT--G-CCATATC-AGAAAT-A-G
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841572 67 -  28871421 TGT--TCA-TTG-AAATGCT-TGAACA----ATGCT-AGTTAGTGG---TTTT-------------------------G-----G---T-AGT-T-A---TTT--G-CCATATC-AGAAAT-G-G
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538087 67 -   4952924 TGT--TCA-TTG-AAATGCT-TGAACA----ATGCT-AGTTAGTGT---TTTT-------------------------G-----G---T-AGT-T-A---TTT--G-CCATATC-AGAAAT-G-G
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18099940 63 +  38429054 TGT--TCA-CTG-AAATGCT-TTAACA----A---A-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-TCGTATC-AGAAAC-G-G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28045 63 +     91421 TGT--TCA-TCA-AAGTGCT-TTTGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154529 63 -   7812017 TGT--TCA-TCA-AAGTGCT-TTTGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8902 63 +     72585 TGT--TCA-TCA-AAGTGCT-TTTGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54023 63 +     55069 TGT--TAG-TTA-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---T-TGT-T-A---TCT--G-CCGTATC-AGAAAT-G-G
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023742 37 -  90668790 CAG--TCC-CTG-AAATTGC-TTA----GGTA---T-CCTT-GCGA---TTTT-------------------------G----------------------------------------------
i Rattus_norvegicus.chr16                                C 0 I 26
s Rhinolophus_sinicus.LVEH01000134.1                       2915552 63 +   3329780 TGT--TCA-TTG-AAATACT-TTAACA----A---T-GCTA-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TTT--G-CCATATC-AGAAAG-G-G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2630 62 +      7119 TGT--TCA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---T-T--G-CCAAGTC-AGAAAT-G-A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123246 62 + 195417433 TGT--TCA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---T-T--G-CCAAGGC-AGAAAT-G-A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237472 62 -   7961872 TGT--TCA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------C-----G---T-AGT-T-G---T-T--G-CCAAGTC-AGAAAT-G-A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76071 67 -    116970 TGC--TCA-TTG-AAATGCT-TGAGCG----ATGCT-ATTTAGTAG---TTTT-------------------------G-----G---T-AGT-T-A---TTT--G-CCATATC-AGAGAT-G-G
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4800 63 +     27962 TGT--TCA-TCG-AAGGGCT-TTACTG----A---C-ACTT-GCGA---TTTT-------------------------G-----G---T-AGT-C-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4694 62 +      6077 TGT--TCA-TCA-AGG-GCT-TCACTG----A---C-ACTT-GCGA---TTTT-------------------------G-----G---T-AGT-C-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4784 63 +      5971 TGT--TCA-TCG-AAGGGCT-TCACTG----A---C-ACTT-GCGA---TTTT-------------------------G-----G---T-AGT-C-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4705 63 +      5932 TGT--TCA-TCG-AAGGGCT-TCACTG----A---C-ACTT-GCGA---TTTT-------------------------G-----G---T-AGT-C-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3047 63 -      4390 TGT--TCA-TCG-AAGGGCT-TCACTG----A---C-ACTT-GCGA---TTTT-------------------------G-----G---T-AGT-C-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392484 63 - 209938924 TGT--TCA-TCG-AAGGGCT-TCACTG----A---C-ACTT-GCGA---TTTT-------------------------G-----G---T-AGT-C-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4653 63 +      5979 TGT--TCA-TCG-AAGGGCT-TCACTG----A---C-ACTT-GCGA---TTTT-------------------------G-----G---T-AGT-C-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1223 62 -     22275 TGT--TCA-TCA-AGG-GCT-TCACTG----A---C-ACTT-GCGA---TTTT-------------------------G-----G---T-AGT-C-A---TCT--G-CCGAGTC-AGAAAT-G-A
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8699 63 +     16473 TGT--TAG-TTG-AAATGCT-TTAATA----A---T-GCTT-GTGA---TTTT-------------------------G-----G---C-TGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109819 63 + 121099817 TGT--TCA-TCG-AAGTGCT-TTACTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CTGAATC-AGAAAT-G-A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31386 63 -     47369 TGT--TCA-TCG-AAGTGCT-TTACTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CTGAATC-AGAAAT-G-A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31772 63 -     79414 TGT--TCA-TCG-AAGTGCT-TTACTG----A---C-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CTGAATC-AGAAAT-G-A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28463 63 -     34454 TGT--TCA-TCG-AAGTGCT-TTACTG----A---C-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CTGAATC-AGAAAT-G-A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15864 63 -     22428 TGT--TCA-TCA-AAGTGCT-TTACTG----A---C-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CTGAATC-AGAAAT-G-A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31018 63 -     47109 TGT--TCA-TCG-AAGTGCT-TTACTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CTGAATC-AGAAAT-G-A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239065 68 +   5703754 TGA--TCA-TCG-AAGTGCT-TTGCTG----A---C-AGTT-GCGA---TTTT-------------------------GATACTG---T-AGT-T-A---TCT--G-CTGAGTC-AGAAAC-G-A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8655 68 +     21866 TGA--TCA-TCG-AAGTGCT-TTGCTG----A---C-AGTT-GCGA---TTTT-------------------------GATACTG---T-AGT-T-A---TCT--G-CTGAGTC-AGAAAC-G-A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116714 62 +    313613 TGT--TAA-TCG-AACTGCT-TTAACA----A---T-GCAT-TTAC---TTTT-------------------------G-----G---T-AGC-T-A---TCT--G-C-ATATT-AGAAAT-G-G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26371 63 +     27374 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29883 63 +     58920 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16381 63 -     45317 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24039 63 -     42441 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26717 63 -     29113 TGT--TCA-TCA-AAGTGCT-TTAGTC----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29792 63 -     48123 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1864985 63 -   1910179 TGT--TCA-CGG-AAAGGCT-TTAACA----A---T-GCTT-GTGA---GTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCATAGT-AAAAAT-G-G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672091 57 +  18376816 TGT--TCT-T-A-AAATGCT-TTAACA----G---T-CATT-G--A----CTT-------------------------G-----G---T-AGT-T-C---T----G-TCATATT-TGAAAT-T-G
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869194 65 +   3870691 TACAttca-tta-aaatgct-ttaata----a---t-ACTT-GTGA---TACT-------------------------C-----A---T-AGT-T-A---TTT--G-CCAAGTA-GGAAGT-G-A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7575 63 -     97271 TGT--TCA-TTG-AGATAAT-TTAACA----A---A-GCAT-GTGA---TCTT-------------------------G-----A---T-AGT-T-A---TCT--A-CCATATC-AGAAGT-G-G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125714 63 +    196729 TGT--TCA-CTG-AGATGCT-TTAACA----A---A-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCCTATC-AGAAAC-A-G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644765 64 +  69701581 TGT--TAG-TTT-AAATGCT-CTAAGA----A---TTTCTT-ATGA---TTGT-------------------------G-----G---T-AGT-T-A---TCT--G-CTATATC-AGAAAT-G-G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       391972 63 +   1523678 TGT--ATA-TCA-AAGTGCT-TTAGTG----A---T-AGTT-GCAA---TTTT-------------------------G-----G---T-AGT-T-A---TCT--G-CCACGTT-AGAAAT-G-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15145 62 +     22964 TGT--TCA-TTA-AAATGCT-TTAACA----A---T-GCTT-GTAA---TTTT-------------------------G-----A---T-AGT-T-A---CTT--G-TCATAC--AGAAAT-G-G
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3550 63 +      5583 TGT--TCA-CTG-AAATGCT-TTAACA----A---T-GCAT-GTGG---TTTT-------------------------G-----G---C-AGT-T-A---TCT--G-CCAACTC-AGAAAT-G-A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192454 63 +    199430 TGT--TCA-TTG-AAAAGCT-TTAACG----G---T-GTTC-GTGA---TTTT-------------------------G-----G---T-AGG-T-A---TTT--G-CCATATC-AGAAAT-G-G
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106422 63 -    539355 TGT--TCA-TTG-AAAAGCT-TTAACG----G---T-GTTC-GTGA---TTTT-------------------------G-----G---T-AGG-T-A---TTT--G-CCATATC-AGAAAT-G-G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1482 66 +      9917 TGT--TCA-CTG-AAATGCC-TTAGTA----G---T-ACTT-ATGA---TTTT-------------------------G-----G---T-AGT-G-GTGTTCT--G-CCAAGTT-AGAAAT-A-G
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8280 66 +     20590 TGT--TCA-CTG-AAATGCC-TTAGTA----G---T-ACTT-ATGA---TTTT-------------------------G-----G---T-AGT-G-GTGTTCT--G-CCAAGTT-AGAAAT-A-G
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354224 62 - 186847797 TGT--TCA-TCA-A-GTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAGTC-AGAAAT-G-A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24910 39 -     33621 CAT--TCA-CTG-AAAGGCT-TTAATT----A---T-ACCT-ACTG---TGGA-------------------------A-----T---A------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 21
s Tolypeutes_matacus.TolMat_scaffold_31955                   20537 63 -     31044 CGC--CCA-CTC-ACATGCT-TTAACA----G---T-GCTT-GAGG---TTAG-------------------------G-----G---T-AGT-T-G---CCT--G-CCAACTC-AGAAAC-A-A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    480975 62 -    610378 GGT--TC-ATTG-AAATGC--TTAACA----G---T-GCTT-G---TGGTTTT-------------------------C-----G---T-AGT-T-A-----CTTG-TCATAT-CAGAAAT-A-G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21916 63 +     26378 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34592 63 -     78344 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21241 63 +     25722 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29548 63 -     62838 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29592 63 +     46913 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10401 38 -     28527 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A----------------------------------------
i Trachypithecus_germaini.k141_57262                     C 0 I 23
s Trachypithecus_hatinhensis.k141_31479                      31483 63 -     64340 TGT--TCA-TCA-AAGTGTT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29521 63 -     63452 TGT--TCA-TCA-AAGTGTT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    10968 63 +     22490 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4391 63 -      6147 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11304 63 -     13050 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256534 63 -   6242583 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2562 63 +     19340 TGT--TCA-TCA-AAGTGCT-TTAGTA----A---T-AGTT-GCAA---TTTT-------------------------C-----A---T-AGT-T-G---TCT--G-CCAAGTC-AGAAAT-G-A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174308 63 -    200418 TGT--TAG-TTG-AAATGCT-TTAACA----G---T-GCTT-ATGA---TTTT-------------------------G-----G---T-TGT-T-A---TCT--G-CCGTATC-TGAATT-G-G
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482371 63 -  10818551 TGT--TCA-CTG-AAGTGCT-TTAACA----A---T-GCAT-GTGA---TTTT-------------------------G-----G---C-AGT-T-A---TCT--G-CCAGCTC-AGGAAT-G-G
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835211 63 -   4065304 TGT--TCA-TTG-ACAAGCT-TTAGAA----G---G-ATTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-C---TCT--G-CCAAGTC-AGAAAT-G-G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9231 63 -     70247 TGT--TCA-TTG-ACGAGCT-TTAGCA----G---G-ATTT-GTGA---TTTG-------------------------G-----G---T-AGT-T-C---TCT--G-CCAAGTC-AGAAAT-G-G
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366547 63 -  33153633 TGT--TAG-TTG-AAATGCT-TTAACA----A---T-GCTT-GTGA---TTTT-------------------------G-----C---T-AGT-T-A---TCT--G-CTGTATC-AGAAAT-G-G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4426 62 -     21056 TGT--TAA-TTG-AAATGCT-TTTACA----A---T-ACTT-ATGA---TTTC-------------------------A-----G---T-GGC-T-A---TCT--G-T-ATATT-AGAAAG-G-G
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182876 63 +   5085361 TGT--TCA-TTG-AAATGCT-TTAACA----A---A-GCAT-GTGA---TTTT-------------------------G-----A---T-AAT-T-A---TCT--G-CCATATC-AGAAAT-G-G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26087 63 -     30710 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TTT--G-CCAAGTC-ACAAAT-G-A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              24994 63 -    147434 TGT--TCA-TGG-AAATGCT-TTAACA----A---T-ACTT-GTGA---TTTT-------------------------G-----G---T-AGT-T-A---TTT--G-CCAAGTC-ACAAAT-G-A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77134 63 +   5488506 TGT--TAg-ttg-aaatgtt-ttaaga----a---t-gCAT-GTGA---TTTT-------------------------A-----G---T-AGT-T-A---TCT--G-CCGTATC-AGAAAT-G-G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105799 62 -    112863 TGT--TCT-TTG-AAATGCT-TTAACA----G---A-GCAT-GTGA---TTTG-------------------------G-----A---T-AGT-T-A---T-T--G-CCATATC-AGAAAA-G-G
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        174957 58 -    224448 T-----TA-TTA-AAATACT-TTAATA----A---T-ACTT---GA---TATT-------------------------G-----A---T-AGT-T-A---TCT--G-CCAAATA-GGAAGA-G-A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29909 63 -     86975 TGT--TCA-TTG-AAATACT-TTAACA----A---G-GCAT-GTGA---TTTT-------------------------G-----A---T-AGT-T-A---TCT--G-CCATATC-AGAAAT-G-G
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       837 60 -      1899 CAT--TCA-CTG-ACATGCT-TTAATT----G---T-GCTT-GTGA---TTTT-------------------------G-----G---T-AC--T-C---TCT--G-CCAAGGC-A--AGT-G-G
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1831 63 +      2126 TGT--TAG-TTG-AAATGCT-TTAACA----G---T-GCTT-GTGA---TTTT-------------------------G-----C---T-AGT-T-A---TCT--G-CTGTATG-AGAAAT-G-G
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922  6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549  6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339  6 -     41509 I
e Noctilio_leporinus.NocLep_scaffold_7894                   128981  0 -    149072 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6325 15 +     36723 ATCCAA---AC----TAGCATA
s Acinonyx_jubatus.LLWD01001279.1                           813745 14 +   1699592 AACCAA---GC----AAGCAC-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26113 12 +     63021 ACCCAG---GC----T--TAT-
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 26 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416203 14 +  29979442 ATCCAA---GC----AAGCAT-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216542 14 +    347723 ATCCAA---GC----AAGCAT-
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19099 14 -     61208 ATCTAA---GG----TAACAC-
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48970 15 +     53615 ATCCAA---AC----TAGCATA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1001 15 +     13857 ATCCAA---AC----TAGCATA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17552 15 -     21945 ATCCAA---AC----TAGCATA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19237 15 +     32033 ATCCAA---AC----TAGCATA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73069 15 -     84148 ATCCAA---AC----TACCGTA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45308 15 -     78289 ATCCAA---AC----TACCATA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44747 15 +     55831 ATCCAA---AC----TACCGTA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43197 15 -     64179 ATCCAA---AC----TACCATA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            304 15 -      3959 ATCCAA---AC----TACCATA
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             41822 15 +     45454 ATCCAA---AC----TACCATA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47471 15 +     70886 ATCCAA---AC----TACCATA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9644 15 +     30854 ATCCAA---AC----TACCATA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33778 15 +     42133 ATCCAA---AC----TACCATA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586207 14 +   2318259 ATTCAA---GC----TAGGGT-
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178001  7 -    412891 GTCCAA---G------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51314 14 -     68529 ATTCAA---GC----TAGGGT-
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2036 15 +     17741 ATCCAA---AC----TACGATA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2661 15 -     15923 ATCCAA---AC----TACGATA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672943 15 +   5030052 ATCCAA---AC----TACGATA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2937 15 -     16391 ATCCAT---AC----TACGATA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2496 15 -     17186 ATCCAA---AC----TACGATA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17020 14 -     32367 ATTCAT---GC----TAACAT-
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21107 14 -     45910 ATCCAA---GG----TTGCAT-
i Arctocebus_calabarensis.k141_1364444                   I 26 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6268  7 -     15198 GTCCAA---G------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275534 15 +  21539123 GTCCAA---AC----TACCATA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11702 15 +     48076 ATCCAA---GC----TACCATA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6837 15 -     28759 ATCCAA---GC----TACCATG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34391 15 +     44353 GTCCAA---AC----TACCATA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49762 15 -     71267 ATCCAA---GC----TACCATG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23820 15 -     33135 ATCCAA---GC----TACCATG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7110 14 +     11645 ATCCAA---GC----TAGTAT-
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7118 14 -     19611 ATCCAA---GC----TAGTAT-
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964346 14 -  23207421 ATCCAA---GC----TAGCAT-
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          846 14 -     25979 ATCCAA---GC----TAGCAT-
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87215 14 +    124022 ATTCAA---GC----TAGGGT-
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22757 14 +    288883 ATTCAA---GC----TAGGGC-
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357147 14 +  48749331 ATTCAA---GC----TAGGGC-
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755711 14 +   1948126 ATTCAA---GC----TAGGGC-
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545853 14 -  45695690 ATTCAA---GC----TAGGGC-
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530868 14 -   4408762 ATTCAA---GC----TAGGGC-
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8710 15 +     28062 ATCCAA---AC----TACCATA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44004 15 -     91139 ATCCAA---AC----TACCATA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21530 15 +     95584 ATCCAA---AC----TACCATA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21443 15 +    119600 ATCCAA---AC----TACCATA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11014 15 +     18648 ATCCAA---AC----TACCATA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10532 15 -     13885 ATCCAA---AC----TACCATA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2619 15 -      8861 ATCCAA---AC----TACCATA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455011 15 + 189096842 ATCCAA---AC----TACCATA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2534 15 +      8664 ATCCAA---AC----TACCATA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631863 14 +  17673402 ATCCAA---GA----TAGCAT-
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666150 14 +   7040546 ATCCAA---GA----TAGCAT-
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209809 14 +   1652518 ATCCAA---GA----TAGCAT-
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506230 14 +  60362399 ATCCAA---GA----AAGCAT-
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9866 14 -     23171 ATCCAA---GA----AAGCAT-
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223209 14 +   9314153 ATCCAA---GA----AAGCAT-
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616344 14 +  59632846 ATCCAA---GA----AAGCAT-
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107925 14 -  63665305 ATCCAA---GA----AAGCAT-
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409936 14 -  46296322 ATTCAA---GC----TAGGGT-
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592210 14 +  44709034 ATTCAA---GC----TAGGGT-
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    375 14 -      1607 CTGCAG---TA----TAATGC-
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271316 14 +    496798 ATCCAA---GC----TAGCAT-
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1126  7 +      9923 GTCCAA---G------------
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28516 14 -     39886 ATCCAA---AC----TAACAT-
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80410 14 -    217609 ATCCAA---AC----TAGCAG-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997245 14 +  23392119 CTCCAA---CC----Taatgt-
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000686 14 +  23407841 CTCCAA---CC----Taatgt-
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63767 14 -     66877 CTCCAA---CC----TAATGT-
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5931 15 -     12580 ATCCAA---AC----TACCATA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               43989 15 +     53515 ATCCAA---AC----TACCATA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373759 15 -  26074798 ATCCAA---AC----CACCATA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8813 15 -     34880 ATCCAA---AC----CACCATA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67909 15 -     89041 ATCCAA---AC----CACCATA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3276 14 -      5494 ATCCAA---GC----TAGCAT-
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493032 14 -  27778364 AGCCAA---GC----TAGCAT-
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19865 14 +     27315 AGCCAA---GC----TAGCAT-
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142118 15 -   4669795 ATCCAG---AC----TAGCATA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45862 15 +     47900 ATCCAG---AC----TAGCATA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1290 15 -     14410 ATCCAG---AC----TAGCATA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45674 15 -    148725 ATCCAG---AC----TAGCATA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27884 15 -     40656 ATCCAA---AC----TAGCATA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7848 15 +     20796 ATCCAA---AC----TAGCGTA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12966 15 -     17524 ATCCAA---AC----TAGCATA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28689 15 -     34525 ATCCAA---AC----TAGCATA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12469 15 -     25376 ATCCAA---AC----TAGCATA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365056 15 -  39242232 ATCCAA---AC----TAGCATA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270783 15 +  21565898 ATCCAA---AC----TAGCATA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33151 15 -     45857 ATCCAA---AC----TAGCATA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28052 15 -     32606 ATCCAA---AC----TAGCATA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4214 15 +      8499 ATCCAA---AC----TAGCATA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26610 15 +     70610 ATCCAA---AC----TAGCATA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23571 15 +     36323 ATCCAA---AC----TAGCATA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13520 14 -     19938 ATCTGA---GC----TAGCTT-
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31483 14 -     33796 ATCCAA---GC----TAGCAT-
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             5997 14 -     15404 ATCCAA---GC----TAGCAT-
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9817 15 -     32913 ATCCAA---AC----TACCATA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20230 15 -     40346 ATCCAA---AC----TACCATA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20485 15 +    216457 ATCCAA---AC----TACCATA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20278 15 +     39636 ATCCAA---AC----TACCATA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4865 15 +      5346 ATCCAA---AC----TACCGTA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43341 15 -    112038 ATCCAA---AC----TACCATA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8892 15 +     34062 ATCCAA---AC----GACCATA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344472 15 +  18827391 ATCCAA---AC----TAGCATA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11014 15 -     44032 ATCCAA---AC----TAGCATA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305797 15 - 135778131 ATCCAA---AC----TAGCATA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15653 14 +     15858 ATCCAA---GT----GAGTGT-
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607228 14 -    839153 ATCCAA---GT----GAGTGT-
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2366 14 +      2406 ATCAAA---GC----TAGCAT-
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             410202 15 -   2368649 ATCTAA---AC----TAGCGTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380083 15 - 200372422 ATCTAA---AC----TAGCATA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3640 15 -     84244 ATCTAA---AC----TAGCATA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808082 14 +  53390261 ATGCAA---AT----TAGTGT-
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3613 14 -      8242 ATCCAA---GC----TAGCAT-
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 44988 12 -     83289 ATTGAA---GC----T--CGT-
i Cricetomys_gambianus.CriGam_scaffold_14425             I 1 C 0
s Cricetulus_griseus.LT883664.1                          213115690 12 - 224834208 ATCCAA---GC----T--TAT-
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10694 14 +     12657 ATCAAA---GC----TATCAT-
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5194 14 +     87169 ATCCAA---GC----AAGAAC-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646244 14 -   1526836 ATCCAA---TC----TAACAT-
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19442 14 +     50838 ATCCAA---TC----CAGTGC-
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 156 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5172 14 +     36344 TTCCAA---TC----TAACTC-
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 2
s Dasyprocta_punctata.DasPun_flattened_line_15900            28949 14 +     75252 CTCCAG---TC----TCATGC-
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110871 14 -   2246927 ATGCAA---GC----TAGCTT-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293419 14 +  12879189 ATCCAA---GC----TGACAT-
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632754 14 -  35494412 ATCCAA---GC----TAGCAT-
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665316 14 -   1390856 AGCCAA---GC----TAGCAT-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140105 14 -    198055 AGCCAA---GC----TAGCAT-
i Diceros_bicornis.DicBicMic_scaffold_5955               I 20 C 0
s Dipodomys_ordii.KN672350.1                              18951409 14 -  37912305 ATCCAA---GC----TAACAT-
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6340 14 -     10735 ATCCAA---GC----TAACAT-
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856367 14 - 111700974 ATCACA---TC----TAGCAT-
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7099 18 +     19438 ATCTAA---GCTAGCTAGCAT-
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240573 14 -    607251 ATTCAA---GC----TAGAGT-
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226586 14 +  10337057 ATCAAA---GC----TAGCAT-
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31827 12 +    110024 ATCCAT---GC----T--TAT-
i Ellobius_lutescens.LOEQ01008920.1                      I 1 C 0
s Ellobius_talpinus.LOJH01026522.1                           13798 12 +     18970 ATCCAT---GC----T--TAT-
i Ellobius_talpinus.LOJH01026522.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               24916954 14 +  41312741 CTCCAA---AC----AAGAAT-
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579735  7 +  14770903 GTCCAA---G------------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042237 14 -   4378816 ATCCAA---GA----TAGCAC-
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376175 14 +  39960074 ATCCAA---GA----TAGCAC-
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412157 14 -    498745 ATCCAA---GA----TAGCAC-
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666866 14 +   7059049 GTCCAA---GA----CAATAT-
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264008 15 +  21539334 ATCCAA---AC----TAGCATA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71960 14 -    133382 ATCCAA---GG----TAGCAT-
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              547 14 -      1072 ATCCAA---GG----TAGCAT-
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15624 14 -     24895 ATCCAA---GC----TAGCAT-
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43334 14 -     70999 ATCCAA---GC----TAGCAT-
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87304 14 +    112731 ATCCAA---GC----TAGCAT-
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43866 14 +     68309 ATCCAA---GC----TAGCAT-
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54191 14 -     65740 ATCCAA---GC----TAGCAT-
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24823 14 -     75513 ATCCAA---GC----TAGCAT-
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49018 14 -     97555 ATCCAA---GC----TAGCAT-
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5742 14 +     30972 ATCCAA---GC----TAGCAT-
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43462 14 -     52037 ATCCAA---GC----TAGCAT-
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59865 14 -    111500 ATCCAA---GC----TAGCAT-
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247655 14 - 206538554 ATCCAA---GC----AAGCAC-
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117441 14 - 205367284 ATCCAA---GC----AAGCAC-
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28538 14 -     30238 ATCCAA---GC----AAGCAC-
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922820 14 -   3816255 CTCCAATTATC----T---GC-
i Fukomys_damarensis.KN121974.1                          I 21 C 0
s Galago_moholi.ctg3793                                     126477 14 -    137831 ATCCAA---GG----TTGCAC-
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10022 14 +     22493 ATCCAT---GG----TTGCAC-
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22092 14 -     32986 ATCCAA---GG----TTGCAT-
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                1994 14 -     28519 ATCCAA---GC----TAGCAT-
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92280 14 -     95226 ATTCAA---GC----TAGGGT-
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            1659 14 -      6791 ATCCAA---GT----TAACAT-
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6625 15 -      8343 ATCCAA---AC----TAGTATA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255640 15 - 186649187 ATCCAA---AC----TAGCATA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2787 14 -     78134 ATCCAA---GC----TAACGT-
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15553 14 -     40692 ATCCAG---GC----TAGCAT-
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36955 14 +     49394 ATCCAG---GC----TAGCAT-
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61823 14 -     66874 ATCCAG---GC----TAGCAT-
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10697 14 -     42923 ATCCAG---GC----TAGCAT-
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17696 14 -     53142 ATCCAG---GC----TAGCAT-
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31628 14 -    327341 ATCCAA---GC----AAGAAC-
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9954 14 +     48891 ATTCAA---GC----TAGGGT-
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933233 17 -  22651954 CTCCAATCATC----TAATGC-
i Heterocephalus_glaber.JH602082.1                       I 21 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1072 14 +      8654 ATCCAA---GC----CAGCGT-
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8462 14 -     36432 ATCCAA---GC----TAGCAC-
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552452 18 -   1711038 ATCCAA---GCTAGATAGCAC-
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1891 18 -      2730 ATCCAA---GCTAGCTAGCAC-
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143649 15 -    630532 ATCCAA---AC----TAGCATA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71031 11 +     83186 ATCCAA---GC----AAG----
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72695 12 +    143317 CTCCAA---CC----CAGT---
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6683 15 +     12352 ATCCAA---AC----TAGCATA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13867 15 +     55766 ATCTAA---AC----TAGCATA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053467 15 + 191637585 ATCCAA---AC----TAGCATA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802345 15 +  11177569 ATCCAA---AC----TAGCATA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7979 14 -    135385 CTCTAA---TC----TAATGC-
i Hystrix_cristata.HysCri_scaffold_5660                  I 20 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387681 14 +   7955117 ATCCAT---GC----TAACAT-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3253 14 +     11955 ATCCAA---GC----TAGTAT-
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10855 14 -     16823 ATCCAA---GC----TAGCAT-
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240929 14 +   9596543 ATCTAA---GG----TAACAC-
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72695 14 -     97402 ATCCAG---GC----TAGCAT-
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44085 15 +    110728 ATCCAA---AC----TACCATA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64066  7 -     65777 GTCCAA---G------------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760346 14 +  30322482 ATCCAA---GC----TAGCAT-
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        4987 15 -     13097 ATCCAA---AC----TACCGTA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4741 15 +      5940 ATCCAA---AC----TACCGTA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4564 15 -      5717 ATCCAA---AC----TACCGTA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10954 15 -     11567 ATCCAA---AC----TACCATA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12335 15 -     12945 ATCCAA---AC----TACCATA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9858 14 +     29618 ATCCAA---GC----TAGCAT-
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9854 14 +     31569 ATCTAA---GC----TAGCAT-
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9864 14 +     24756 ATCCAA---GC----TAGCAT-
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9864 14 +     16388 ATCTAA---GC----TAGCAT-
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814336 14 -   3914936 AACCAA---GC----AAGCAT-
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18699 14 +     24238 ATCCAG---GC----TTACAT-
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342040 14 +    662738 ATCCAA---GC----TAGCAT-
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335003 15 -   1826925 ATCCAG---AC----TAGCATA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12175 14 +     19643 ATCCAA---GG----TTGCAT-
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045845 14 -   6120653 ATCCAA---GG----TTGCAT-
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085741 14 +  43346337 ATGCAG---GC----TAGCAC-
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615499 14 +  59628241 ATCCAA---GA----AAGCAT-
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46392 15 -     61512 ATCCAG---AC----TAGCATA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374054 15 -  60120075 ATCCAG---AC----TAGCATA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26322 15 +     30207 ATCCAG---AC----TAGCATA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1160 15 -      5035 ATCCAG---AC----TAGCATA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26275 15 +     30527 ATCCAG---AC----TAGCATA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37451 15 -     50087 ATCCAG---AC----TAGCATA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47195 15 +     51645 ATCCAG---AC----TAGCATA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416398 15 - 187317192 ATCCAG---AC----TAGCATA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400628 15 +  25927173 ATCCAG---AC----TAGCATA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49800 15 -     62418 ATCCAG---AC----TAGCATA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2331 15 +     14901 ATCCAG---AC----TAGCATA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46272 15 +     59329 ATCCAG---AC----TAGCATA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272180 15 +    668171 ATCCAG---AC----TAGCATA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   818 15 -      5049 ATCCAG---AC----TAGCATA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3978 15 +     17132 ATCCAG---AC----TAGCATA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224067 18 -    270270 ATCAAA---GCTAGCTAGCAT-
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323468 15 +  24302211 ATCCAG---AC----TAGCATA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358299 15 -    752769 ATCCAG---AC----TAGCATA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674386 14 -    737560 ATCCAA---TC----TACCAT-
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221686 14 +    317179 ATCCAA---AC----TAGCAC-
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501895 14 +  40650429 ATCCAT---GC----TAACAT-
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151232 14 +    207569 ATCCAA---GA----TAGCGT-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27053 14 -     74585 ATCCAA---GC----AAGTAT-
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 51008 12 -    140813 ACCTAA---GC----T--TAT-
i Meriones_unguiculatus.MerUng_scaffold_7390             I 26 C 0
s Mesocricetus_auratus.KB708134.1                         17430074 12 +  29670104 ATCCAA---GT----T--TAT-
i Mesocricetus_auratus.KB708134.1                        I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88324 14 +     93471 ATCCAA---GA----TAGAAT-
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11121 15 +     17804 ATCCAA---AC----TACCATA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11621 15 -     12984 ACCCAA---AC----TACCATA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19937 15 -     26561 ATCCAA---AC----TACCATA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985696 14 +  93316391 ATCCAA---GC----TAGTAT-
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47574  6 +    145209 ATCAAA----------------
i Microgale_talazaci.MicTal_scaffold_6613                I 5 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185920  7 +    200668 GTCCAA---G------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963268 12 +  27267610 ATCCAT---GC----T--TAT-
i Microtus_ochrogaster.CM001695.1                        I 1 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364072  7 -   8254450 ATCCAA---G------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42979  7 -     48117 ATCCAA---G------------
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23503 15 -     27822 ATCCAA---AC----TAGCATA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9347 14 +     27589 AACCAA---GC----AAGCAT-
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53479 14 -     62432 ATCCAA---GC----TAGTAT-
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360429 14 +    437263 ATCCAA---GC----TAGCAT-
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180144  7 +    366855 GTCCAA---G------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26400 14 -     82753 ATTCAA---GC----TAGGGT-
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19361 14 -     63510 ATCCAA---GC----AAGAAC-
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40036  7 +     47283 GTCCAA---G------------
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35595144 12 + 120012414 AACCAA---AC----T--TAT-
i Mus_caroli.LT608237.1                                  I 26 C 0
s Mus_musculus.chr8                                       41688370 12 + 129401213 AACCAA---AC----T--TAT-
i Mus_musculus.chr8                                      I 26 C 0
s Mus_spretus.CM004101.1                                  39497664 12 + 130317789 AACCAA---AC----T--TAT-
i Mus_spretus.CM004101.1                                 I 26 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84345 14 -     86153 ATCCAA---GA----TAACGT-
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355975 14 +  14710649 CTCCAA---GA----AAGTAT-
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63947 14 +     67721 CTGCAA---TG----TAACGC-
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794296  7 +  10118263 GTCCAA---A------------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388469  7 +   6019432 GTCCAA---G------------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384256  7 +   4330536 GTCCAA---G------------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3290  7 +     18357 GCCCAA---G------------
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120622 14 +    130748 ATCCAG---GC----TAGCAT-
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947570 14 +   3037898 ATCCAG---GC----TCACAT-
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30159 15 +     34575 ATCCAA---AC----TAGCATA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233095 14 -   7148211 ATCCAA---GC----TAGCAT-
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nomascus_annamensis.k141_1771965                           54575 15 -    132029 ATCCAA---AC----TAGCATA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10670 15 -     16345 ATCCAA---AC----TAGCATA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16555 15 +     22201 ATCCAA---AC----TAGCATA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414776 15 -  22158432 ATCCAA---AC----TAGCATA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26953 15 -     54323 ATCCAA---AC----TAGCATA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199095 14 +   9404916 ATCCAA---GA----AAGCAT-
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639074 14 + 196305487 ATCCAA---GG----TTGCAT-
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1677 14 -      9413 ATCCAA---GG----TTGCAT-
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566457 14 - 199412804 ATCCAA---GG----TTGCAT-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557760 14 -   3988456 ATCCAG---GC----TAATAT-
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056050 14 -  11899542 ATTCAA---TC----TAATGT-
i Octodon_degus.JH651603.1                               I 147 C 0
s Odobenus_rosmarus.KB229312.1                             1452764 14 +   2017862 ATCCAA---GC----CAGCAT-
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437169 14 -    630418 ATTCAA---GC----TAGGGT-
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15364 14 +    150152 ATTCAA---GC----TAGGGT-
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93623 12 -    140218 ATCCAA---GC----T--TAT-
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 C 0
s Orcinus_orca.KB316932.1                                  8103497 14 +  10937097 ATCCAA---GC----TAGCAT-
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                523 14 +     11607 ATCAAA---GC----TAGCAT-
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104499 14 - 174332312 ATCCAG---GC----TAACAT-
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                        40138 14 +    559221 ATCCAA---GA----AAGCAT-
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41625 14 -     51505 ATCCAA---GG----TTGCAT-
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354628 14 +   1103335 ATCCAA---GG----TTGCAT-
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405074 14 -  44047080 ATTCAA---GC----TAGGGt-
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5593 14 +     17875 ATTCAA---GC----TAGGGT-
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473669 15 - 189151597 ATCCAA---AC----TAGCATA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25361 14 -    230217 ATCCAA---GC----AAGCAC-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462687 14 -  18783137 ATCCAA---GC----AAGCAC-
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973346 14 +   8748460 ATCCAA---GC----AAGCAC-
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616602 14 +   2937107 ATTCAA---GC----TAGGGT-
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244300 15 - 183742232 ATCCAG---ac----tagcata
i Papio_anubis.CM001495.2                                C 0 I 177
s Papio_cynocephalus.k141_1507553                            10762 15 +     21308 ATCCAC---AC----TAGCATA
i Papio_cynocephalus.k141_1507553                        C 0 I 4
s Papio_hamadryas.Contig39                                  293335 15 -  20919399 ATCCAG---AC----TAGCATA
i Papio_hamadryas.Contig39                               C 0 I 170
s Papio_kindae.k141_2214839                                  23410 14 -     27687 ATCCAG---AC----TAGCAT-
i Papio_kindae.k141_2214839                              C 0 I 1
s Papio_papio.k141_799093                                    16556 15 +     16796 ATCCAG---AC----TAGCATA
i Papio_papio.k141_799093                                C 0 N 0
s Papio_ursinus.k141_2278143                                 23367 15 -     23640 ATCCAG---AC----TAGCATA
i Papio_ursinus.k141_2278143                             C 0 N 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15941 14 +     78924 ATCCAA---GC----AAGCAC-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27955 14 +     31479 ATCCAA---GG----TTGCAT-
i Perodicticus_ibeanus.k141_1921260                      I 27 C 0
s Perodicticus_potto.k141_1854441                            20323 14 -     24908 ATCCAA---AG----TTGCAT-
i Perodicticus_potto.k141_1854441                        I 27 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2752 13 +      9367 ATCCA----GC----TAGCAT-
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32796 14 -     56120 CTTTGT---TC----TAATGC-
i Petromus_typicus.PetTyp_scaffold_17301                 I 21 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5023 14 -     63832 ATCCAA---GC----TAGCAT-
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3590 15 +     55023 ATCCAA---AC----TAGCATA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3128 15 -     89929 ATCCAT---AC----TAGCATA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3718 15 +     40849 ATCCAT---AC----TAGCATA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255393 15 +  14605196 ATCCAA---AC----TAGCATA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4872  7 +     22231 GTCCAA---G------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65708 15 +    207309 ATCCAA---AC----TACCATA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6800 15 -     25401 ATCCAA---AC----TACCATA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32544 15 +     58159 ATCCAA---AC----TACCATA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32820 15 +     63561 ATCCAA---AC----TACCATA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32580 15 +     51148 ATCCAA---AC----TACCATA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557550 15 -   4542175 ATCCAA---AC----TACCATA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32564 15 +     51125 ATCCAA---AC----TACCATA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2040 14 +     19503 ATCCAA---GC----TAGCAT-
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8982 15 +     39866 ATCCAA---AC----TACCGTA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4064 15 -      9282 ATCCAA---AG----TACCGTA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43468 15 -     87950 ATCCAA---AC----TACCGTA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43862 15 -     88961 ATCCAA---AC----TACCGTA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8560 15 -     39403 ATCCAA---AC----TACCGTA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43511 15 +     87928 ATCCAA---AC----TACCGTA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8559 15 -     60166 ATCCAA---AC----TACCGTA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15496 15 -     67232 ATCCAA---AC----TACCGTA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43412 15 -     90634 ATCCAA---AC----TACCGTA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44879 15 +     89403 ATCCAA---AC----TACCGTA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178779 15 - 189387572 ATCCAA---AC----TAGCATA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193596 15 -   9816681 ATCCAA---AC----TAGCATA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28738 15 +     69807 ATCCAA---AC----TAGCATA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45919 15 -     80239 ATCCAA---AC----TAGCATA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5063 14 +      7663 ATCCAA---GC----CAGCGT-
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983494 14 +   4620579 ATCCAA---GC----TAGCAT-
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567004 14 -   2598838 ATCCAA---GC----TAGTAT-
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4642 14 -      7103 ATCCAA---GC----TAGTAT-
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5239 14 -     11706 ATCCAA---GC----TAGTAT-
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8976 14 -     30655 ATCCAA---GC----TAGTAT-
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35290 14 +     46564 ATCCAA---GC----TAGTAT-
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95569 14 -     98465 ATCCAA---GC----TAGTAT-
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9208 14 +     35169 ATCCAA---GC----TAGTAT-
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38522 12 +     52041 ACctaa---gc----t--tat-
i Psammomys_obesus.NESX01036366.1                        I 26 C 0
s Pteronotus_parnellii.KE847780.1                            53037  7 -     66298 GTCCAA---G------------
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5549 14 -     18639 CTCCAA---AC----AAGTAT-
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841639 18 -  28871421 ATCTAA---GCTAGCTAGCAT-
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538154 18 -   4952924 ATCTAA---GCTAGCCAGCAT-
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100003 14 +  38429054 AACCAA---GC----AAGCAC-
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28108 15 +     91421 ATCCAA---AC----TAGCATA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154592 15 -   7812017 ATCCAA---AC----TAGCATA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8965 15 +     72585 ATCCAA---AC----TAGCATA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54086 14 +     55069 ATTCAA---GC----TAGGGT-
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023805 12 -  90668790 AACCAA---AC----T--TAC-
i Rattus_norvegicus.chr16                                I 26 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915615 18 +   3329780 ATCCAA---GCTAGCTAGCAC-
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2692 15 +      7119 ATCCAA---AC----TAGCATA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123308 15 + 195417433 ATCCAA---AC----TAGCGTA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237534 15 -   7961872 ATCCAA---AC----TAGCATA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76138 18 -    116970 ATCTAA---GCTAGCTAGCAT-
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4863 15 +     27962 ATCCAA---AC----TACCGTA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4756 15 +      6077 ATCCAA---AC----TACCGTC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4847 15 +      5971 ATCCAA---AC----TACCGTA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4768 15 +      5932 ATCCAA---AC----TACCGTA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3110 15 -      4390 ATCCAA---AC----TACCATA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392547 15 - 209938924 ATCCAA---AC----TACCGTA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4716 15 +      5979 ATCCAA---AC----TACCGTA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1285 15 -     22275 ATCCAA---AC----TACCGTC
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8762 14 +     16473 ATTCAA---GC----TAGGGT-
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109882 15 + 121099817 ATCCCA---AC----TATCATA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31449 15 -     47369 ATCCCA---AC----TATCATA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31835 15 -     79414 ATCCCA---AC----TATCATA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28526 15 -     34454 ATCCCA---AC----TATCATA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15927 15 -     22428 ATCCCA---AC----TATCATA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31081 15 -     47109 ATCCCA---AC----TATCATA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239133 15 +   5703754 ATCCAA---AC----CACCATA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8723 15 +     21866 ATCCAA---AC----CACCATA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116776 14 +    313613 ACGCAA---GC----TAGTAT-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26434 15 +     27374 ATCCAA---AC----TAGCATA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29946 15 +     58920 ATCCAA---AC----TAGCATA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16444 15 -     45317 ATCCAA---AC----TAGCATA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24102 15 -     42441 ATCCAA---AC----TAGCATA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26780 15 -     29113 ATCCAA---AC----TAGCATA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29855 15 -     48123 ATCCAA---AC----TAGCATA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865048 12 -   1910179 ATCCAG---A------AGCAT-
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672148 14 +  18376816 ATCAAA---GC----TATCAC-
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869259 14 +   3870691 ATCCAT---GC----TACCAT-
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7638 14 -     97271 ATCCAA---GC----AATCAT-
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125777 14 +    196729 ATCCAA---AC----AAGAAC-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644829 14 +  69701581 ATCCAA---GC----TAGCAT-
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392035 15 +   1523678 ATCCAA---AC----TAGCATA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15207  7 +     22964 ATCTGA---G------------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3613 14 +      5583 ATCCAG---GC----TAGCAT-
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192517 14 +    199430 ACCCAA---GC----TAGCAT-
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106485 14 -    539355 ACCCAA---GC----TAGCAT-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1548 14 +      9917 ATCCAA---GC----TAGCAT-
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8346 14 +     20590 ATCCAA---GC----TAGCAT-
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354286 15 - 186847797 ATCCAG---AC----TAGCATA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24970 14 -     33621 CTCCGA---TG----TAATGC-
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 21 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20600 14 -     31044 AGCCGA---GC----TAGCTT-
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481037  7 -    610378 GTCCAA---G------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21979 15 +     26378 ATCCAA---AC----TAGCATA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34655 15 -     78344 ATCCAA---AC----TAGCATA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21304 15 +     25722 ATCCAA---AC----TAGCATA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29611 15 -     62838 ATCCAA---AC----TAGCATA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29655 15 +     46913 ATCCAA---AC----TAGCATA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10462 15 -     28527 ATCCAA---AC----TAGCATA
i Trachypithecus_germaini.k141_57262                     I 23 C 0
s Trachypithecus_hatinhensis.k141_31479                      31546 15 -     64340 ATCCAA---AC----TAGCATA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29584 15 -     63452 ATCCAA---AC----TAGCATA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11031 15 +     22490 ATCCAA---AC----TAGCATA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4454 15 -      6147 ATCCAA---AC----TAGCATA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11367 15 -     13050 ATCCAA---AC----TAGCATA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256597 15 -   6242583 ATCCAA---AC----TAGCATA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2625 15 +     19340 ATCCAA---AC----TAGCATA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174371 14 -    200418 ATCCAA---GC----TAGGAT-
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482434 14 -  10818551 ATCCAA---GC----TAGCAT-
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835274 14 -   4065304 ATCCAA---GG----TAACAT-
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9294 14 -     70247 ATCCAA---GG----TAACAT-
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366610 14 -  33153633 ATCCAA---GC----TAGCAT-
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4488 14 -     21056 ATGTAA---GT----GAGTAT-
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182939 14 +   5085361 ATCCAA---GC----AAGCAT-
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26150 14 -     30710 ATCCAA---GC----TAGCAT-
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25057 14 -    147434 ATCCAA---GC----TAGCAT-
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77197 14 +   5488506 ATCCAA---GA----TAGCAT-
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105861 14 -    112863 ATCCAA---GA----AAGCAT-
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175015 14 -    224448 ATCCAT---GC----TAACAT-
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29972 14 -     86975 ATCCAA---GC----CAGCAT-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       897 14 -      1899 ATCTAA---GA----TAACAC-
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1894 14 +      2126 ATCCAA---GA----TAGGAT-
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Chinchilla_lanigera.JH722012.1                           1239608  0 -   2543920 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Dinomys_branickii.DinBra_scaffold_10381                    99690  0 -    115145 C
e Desmodus_rotundus.KZ672289.1                            11866171  0 -  20541912 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922  6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549  6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339  6 -     41509 I
e Noctilio_leporinus.NocLep_scaffold_7894                   128981  0 -    149072 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6340 10 +     36723 TT-TT-GAC--------------CT-T
s Acinonyx_jubatus.LLWD01001279.1                           813759 10 +   1699592 -TATT-GGC--------------TT-T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26125  9 +     63021 -TGTT-AAT--------------T--T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416217 10 +  29979442 -TGTT-GGC--------------TT-T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216556 10 +    347723 -TGTG-GGC--------------AT-T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19113  8 -     61208 ---TC-TTT--------------TT-T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 299
s Allenopithecus_nigroviridis.k141_3755588                   48985 10 +     53615 TT-TT-GAC--------------CT-T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1016 10 +     13857 TT-TT-GAC--------------CT-T
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17567 10 -     21945 TT-TT-GAC--------------CT-T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19252 10 +     32033 TT-TT-GAC--------------CT-T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73084 10 -     84148 TT-TT-GGC--------------CT-T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45323 10 -     78289 TT-TT-GGC--------------CT-T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44762 10 +     55831 TT-TT-GGC--------------CT-T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43212 10 -     64179 TT-TT-GGC--------------CT-T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            319 10 -      3959 TT-TT-GGC--------------CT-T
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             41837 10 +     45454 TT-TT-GGC--------------CT-T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47486 10 +     70886 TT-TT-GGC--------------CT-T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9659 10 +     30854 TT-TT-GGC--------------CT-T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33793 10 +     42133 TT-TT-GGC--------------CT-T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586221 11 +   2318259 -TTTT-GGC--------------TTTT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178008 17 -    412891 --------CTAGCATTGTTGGCTT--T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51328 11 -     68529 -TTTT-GGC--------------TTTT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2051 10 +     17741 TT-TT-GGC--------------CT-T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2676 10 -     15923 TT-TT-GGC--------------CT-T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672958 10 +   5030052 TT-TT-GGC--------------CT-T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2952 10 -     16391 TT-TT-GGC--------------CT-T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2511 10 -     17186 TT-TT-GGC--------------CT-T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17034 10 -     32367 -CATT-AAC--------------TT-T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21121  9 -     45910 -T-TC-TGC--------------AA-T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6275 17 -     15198 --------CTCACATTGTTGGCTT--T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275549 10 +  21539123 TT-TT-GGC--------------CT-T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11717 10 +     48076 TT-TT-GGC--------------CT-T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6852 10 -     28759 TT-TT-GGC--------------CT-T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34406 10 +     44353 TT-TT-GGC--------------CT-T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49777 10 -     71267 TT-TT-GGC--------------CT-T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23835 10 -     33135 TT-TT-GGC--------------CT-T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7124  9 +     11645 -T-TT-GGC--------------CA-T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7132  9 -     19611 -T-TT-GGC--------------CA-T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964360 10 -  23207421 -TGTT-GGC--------------TT-T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          860 10 -     25979 -TGTT-GGC--------------TT-T
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87229 11 +    124022 -TTTT-GGC--------------TTTT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22771 11 +    288883 -TTTT-GGC--------------TTTT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357161 11 +  48749331 -TTTT-GGC--------------TTTT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755725 11 +   1948126 -TTTT-GGC--------------TTTT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545867 11 -  45695690 -TTTT-GGC--------------TTTT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530882 11 -   4408762 -TTTT-GGC--------------TTTT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8725 10 +     28062 TT-TT-GGC--------------CT-T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44019 10 -     91139 TT-TT-GGC--------------CT-T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21545 10 +     95584 TT-TT-GGC--------------CT-T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21458 10 +    119600 TT-TT-GGC--------------CT-T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11029 10 +     18648 TT-CT-GGC--------------CT-T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10547 10 -     13885 TT-CT-GGC--------------CT-T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2634 10 -      8861 TT-CT-GGC--------------CT-T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455026 10 + 189096842 TT-CT-GGC--------------CT-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2549 10 +      8664 TT-CT-GGC--------------CT-T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631877 10 +  17673402 -TGTC-GGC--------------TT-T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666164 10 +   7040546 -TGTC-GGC--------------TT-T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209823 10 +   1652518 -TGTC-GGC--------------TT-T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506244 10 +  60362399 -TGTT-GGC--------------TT-T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9880 10 -     23171 -TGTT-GGC--------------TT-T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223223 10 +   9314153 -TGTT-GGC--------------TT-T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616358 10 +  59632846 -TGTT-GGC--------------TT-T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107939 10 -  63665305 -TGTT-GGC--------------TT-T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409950 11 -  46296322 -TTTT-GGC--------------TTTT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592224 11 +  44709034 -TTTC-GGC--------------TTTT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    389 10 -      1607 -TGTT-AGG--------------CT-T
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271330  9 +    496798 -T-TT-GGC--------------CT-C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1133 17 +      9923 --------CTGGCATTGTTGGCTT--T
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28530 10 -     39886 -TGTT-AGC--------------CT-T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80424 10 -    217609 -TGTT-GGC--------------TT-T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997259 10 +  23392119 -tgtt-tgt--------------tt-t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000700 10 +  23407841 -tgtt-tgt--------------tt-t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63781 10 -     66877 -TGTT-TGT--------------TT-T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5946 10 -     12580 TT-CT-GGC--------------CT-T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44004 10 +     53515 TT-CT-GGC--------------CT-T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373774 10 -  26074798 TT-CT-GGC--------------CT-T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8828 10 -     34880 TT-CT-GGC--------------CT-T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67924 10 -     89041 TT-CT-GGC--------------CT-T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3290  9 -      5494 -T-TT-GGC--------------CT-C
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493046 10 -  27778364 -TGCT-TGC--------------TT-T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19879 10 +     27315 -TGCT-TGC--------------TT-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142133 10 -   4669795 TT-TT-GAC--------------CT-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45877 10 +     47900 TT-TT-GAC--------------CT-T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1305 10 -     14410 TT-TT-GAC--------------CT-T
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45689 10 -    148725 TT-TT-GAC--------------CT-T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27899 10 -     40656 TT-TT-GAC--------------CT-T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7863 10 +     20796 TT-TT-GAC--------------CT-T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12981 10 -     17524 TT-TT-GAC--------------CT-T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28704 10 -     34525 TT-TT-GAC--------------CT-T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12484 10 -     25376 TT-TT-GAC--------------CT-T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365071 10 -  39242232 TT-TT-GAC--------------CT-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270798 10 +  21565898 TT-TT-GAC--------------CT-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33166 10 -     45857 TT-TT-GAC--------------CT-T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28067 10 -     32606 TT-TT-GAC--------------CT-T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4229 10 +      8499 TT-TT-GAC--------------CT-T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26625 10 +     70610 TT-TT-GAC--------------CT-T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23586 10 +     36323 TT-TT-GAC--------------CT-T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13534 10 -     19938 -TCTT-GGC--------------CT-T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31497  9 -     33796 -T-TT-GGC--------------CT-T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6011  9 -     15404 -T-TT-GTC--------------CT-T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9832 10 -     32913 TT-TT-GGC--------------AT-T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20245 10 -     40346 TT-TT-GGC--------------AT-T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20500 10 +    216457 TT-TT-GGC--------------AT-T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20293 10 +     39636 TT-TT-GGC--------------AT-T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239608  3 -   2543920 -----------------------CT-T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4880 10 +      5346 TT-CT-GGC--------------CT-T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43356 10 -    112038 TT-TT-GGC--------------CT-T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8907 10 +     34062 TT-TT-GGC--------------CT-T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344487 10 +  18827391 TT-TT-GAC--------------CT-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11029 10 -     44032 TT-TT-GAC--------------CT-T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305812 10 - 135778131 TT-TT-GAC--------------CT-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15667 10 +     15858 -TGTT-GCC--------------CT-T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607242 10 -    839153 -TGTT-GCC--------------CT-T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2380 10 +      2406 -TGTT-AGG--------------TT-T
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 C 0
s Colobus_angolensis.KN981557.1                             410217 10 -   2368649 TT-GT-GAT--------------CT-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380098 10 - 200372422 TT-GT-GAT--------------CT-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3655 10 -     84244 TT-GT-GAT--------------CT-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808096 10 +  53390261 -CGCT-AGC--------------TT-C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3627 10 -      8242 -TGTT-GGC--------------TT-T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 45000 10 -     83289 -TGTT-AAC--------------TT-T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115702 10 - 224834208 -GGTT-AAC--------------TT-T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10708 10 +     12657 -TGTT-GAA--------------TT-T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5208 10 +     87169 -TATT-GGC--------------TT-T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646258 10 -   1526836 -CGTT-AGA--------------CT-T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19456 10 +     50838 -TGTT-AGC--------------CT-T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5188  4 +     36344 --------T--------------CT-T
i Cuniculus_paca.CunPac_flattened_line_7025              I 2 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28963 10 +     75252 -TGTT-AGT--------------CT-T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110885 10 -   2246927 -TCTT-GGC--------------CT-T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293433  9 +  12879189 -T-TT-GGC--------------CT-T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632768 10 -  35494412 -TGTT-GGC--------------TT-T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665330 10 -   1390856 -TGCT-TGC--------------TT-T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140119 10 -    198055 -TGCT-TGC--------------TT-T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99690  3 -    115145 -----------------------CT-T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951423 10 -  37912305 -TGTT-AGC--------------CT-T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6354 10 -     10735 -TGTT-AGC--------------CT-T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856381 10 - 111700974 -TGCT-GGG--------------TT-T
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7117 10 +     19438 -TGTT-GGC--------------TT-T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240587 11 -    607251 -TTTT-GGC--------------TTTT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226600 10 +  10337057 -TGTT-AGG--------------CT-T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31839 10 +    110024 -TGTT-AAC--------------TT-T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13810 10 +     18970 -TGTT-AAC--------------TT-T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916968 10 +  41312741 -TGTG-GGC--------------TT-T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579742  3 +  14770903 --------C--------------C--T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042251 10 -   4378816 -AGTT-GGC--------------TT-T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376189 10 +  39960074 -AGTT-GGC--------------TT-T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412171 10 -    498745 -AGTT-GGC--------------TT-T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666880 10 +   7059049 -TGCT-GAC--------------TT-T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264023 10 +  21539334 TT-TT-GAC--------------CT-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71974 10 -    133382 -TGTT-GGC--------------TT-T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              561 10 -      1072 -TGTT-GGC--------------TT-T
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15638  9 -     24895 -T-TT-GGC--------------CT-T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43348  9 -     70999 -T-TT-GGC--------------CT-T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87318  9 +    112731 -T-TT-GGC--------------CT-T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43880  9 +     68309 -T-TT-GGC--------------CT-T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54205  9 -     65740 -T-TT-GGC--------------CT-T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24837  9 -     75513 -T-TT-GGC--------------CT-T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49032  9 -     97555 -T-TT-GGC--------------CT-T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5756  9 +     30972 -T-TT-GGC--------------CT-T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43476  9 -     52037 -T-TT-GGC--------------CT-T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59879  9 -    111500 -T-TT-GGC--------------CT-T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247669 10 - 206538554 -TATT-GGC--------------TT-T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117455 10 - 205367284 -TATT-GGC--------------TT-T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28552 10 -     30238 -TATT-GGC--------------TT-T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922834 10 -   3816255 -TTTT-AGT--------------CT-T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126491  9 -    137831 -T-TC-TGC--------------CT-T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10036  9 +     22493 -T-TC-TGC--------------CT-T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22106  9 -     32986 -T-TC-TGC--------------CT-T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2008 10 -     28519 -TGCT-GGC--------------TT-T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92294 11 -     95226 -TTTT-GAC--------------TTTT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            1673 10 -      6791 -TGGT-AGC--------------GT-T
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6640 10 -      8343 TT-TT-GAC--------------CT-T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255655 10 - 186649187 TT-TT-GAC--------------CT-T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2801 11 -     78134 -TGGTTAGT--------------CT-T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15567  9 -     40692 -T-TT-GGC--------------CT-T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36969  9 +     49394 -T-TT-GGC--------------CT-T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61837  9 -     66874 -T-TT-GGC--------------CT-T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10711  9 -     42923 -T-TT-GGA--------------CT-T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17710  9 -     53142 -T-TT-GGC--------------CT-T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31642 10 -    327341 -TATT-GGC--------------TT-T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9968 11 +     48891 -TTTC-AGC--------------TTTT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933250 10 -  22651954 -TATT-AGT--------------CT-T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1086 10 +      8654 -TGTT-GGC--------------CT-T
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8476 10 -     36432 -TGTC-GGC--------------TT-T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552470 10 -   1711038 -TGTT-GGC--------------TT-T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1909 10 -      2730 -TGTT-GGC--------------TT-T
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143664 10 -    630532 TT-TC-GAC--------------CT-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71042  4 +     83186 --------C--------------TT-T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               6698 10 +     12352 TT-TT-GAC--------------CT-T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13882 10 +     55766 TT-TT-GAC--------------CT-T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053482 10 + 191637585 TT-TT-GAC--------------CT-T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802360 10 +  11177569 TT-TT-GAC--------------CT-T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       7993 10 -    135385 -TGTT-AGT--------------CT-T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387695 10 +   7955117 -TGTT-AAC--------------TT-T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3267  9 +     11955 -T-TT-GGC--------------CT-T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10869 10 -     16823 -TGTT-GGC--------------TT-T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240943  6 +   9596543 ---TC---T--------------TT-T
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72709 10 -     97402 -TGTT-GGC--------------TT-T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44100 10 +    110728 TT-TT-GGC--------------CT-T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64073  3 -     65777 --------C--------------C--T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760360  9 +  30322482 -T-TT-GGC--------------CT-T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5002 10 -     13097 TT-CT-GGC--------------CT-T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4756 10 +      5940 TT-CT-GGC--------------CT-T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4579 10 -      5717 TT-CT-GGC--------------CT-T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10969 10 -     11567 TT-CT-GGC--------------CT-T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12350 10 -     12945 TT-CT-GGC--------------CT-T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9872  9 +     29618 -T-TT-GGC--------------CT-T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9868  9 +     31569 -T-TT-GGC--------------CT-T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9878  9 +     24756 -T-TT-GGC--------------CT-T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9878  9 +     16388 -T-TT-GGC--------------CT-T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814350  8 -   3914936 -TGTT-GG----------------T-T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18713 10 +     24238 -GGTT-GGC--------------CT-T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342054 10 +    662738 -TGTT-GGC--------------TT-T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335018 10 -   1826925 TT-TT-GAC--------------CT-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12189  9 +     19643 -T-TC-TCT--------------CT-T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045859  9 -   6120653 -T-TC-TCT--------------CT-T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085755 10 +  43346337 -TGCT-GGC--------------CT-T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615513 10 +  59628241 -TGTT-GGC--------------TT-T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46407 10 -     61512 TT-TT-GAC--------------CT-T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374069 10 -  60120075 TT-TT-GAC--------------CT-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26337 10 +     30207 TT-TT-GAC--------------CT-T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1175 10 -      5035 TT-TT-GAC--------------CT-T
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26290 10 +     30527 TT-TT-GAC--------------CT-T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37466 10 -     50087 TT-TT-GAC--------------CT-T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47210 10 +     51645 TT-TT-GAC--------------CT-T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416413 10 - 187317192 TT-TT-GAC--------------CT-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400643 10 +  25927173 TT-TT-GAC--------------CT-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49815 10 -     62418 TT-TT-GAC--------------CT-T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2346 10 +     14901 TT-TT-GAC--------------CT-T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46287 10 +     59329 TT-TT-GAC--------------CT-T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272195 10 +    668171 TT-TT-GAC--------------CT-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   833 10 -      5049 TT-TT-GAC--------------TT-T
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 3993 10 +     17132 TT-TT-GAC--------------CT-T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224085 10 -    270270 -TGTA-GGC--------------TT-T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323483 10 +  24302211 TT-TT-GAT--------------CT-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358314 10 -    752769 TT-TT-GAT--------------CT-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674400 10 -    737560 -TGTT-GGC--------------TT-T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221700 10 +    317179 -AGTT-GGC--------------TT-T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501909 10 +  40650429 -TGTT-AAC--------------TT-T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151246 10 +    207569 -TGTT-AGC--------------TT-T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27067 10 -     74585 -TGTG-GGC--------------TT-T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 51020  9 -    140813 -TTTT-AAT--------------T--T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17430086  9 +  29670104 -CA-T-AAC--------------CT-T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88338 10 +     93471 -TGTT-GGC--------------TT-T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11136 10 +     17804 TT-CT-GGC--------------CT-T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11636 10 -     12984 TT-CT-GGC--------------CT-T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19952 10 -     26561 TT-CT-GGC--------------CT-T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985710  9 +  93316391 -T-TT-GGC--------------CT-T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185927 17 +    200668 --------CTGGCATTGTTGGCTT--T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963280 10 +  27267610 -TGTT-AAC--------------TT-T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364079  4 -   8254450 --------C--------------TT-T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42986  4 -     48117 --------C--------------TT-T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23518 10 -     27822 TT-TT-GAC--------------CT-T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9361  8 +     27589 -TGTT-GG----------------T-T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53493  9 -     62432 -T-TT-GGC--------------CT-T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360443 10 +    437263 -TGTT-GGC--------------TT-T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180151 17 +    366855 --------CTAGCATTGTTGGCTC--T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26414 11 -     82753 -TTTT-GGC--------------TTTT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19375 10 -     63510 -TATT-GGC--------------TT-T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40043  3 +     47283 --------C--------------C--T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35595156  9 + 120012414 -CATT-AAC--------------T--T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688382  9 + 129401213 -CATT-AAC--------------T--T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497676  9 + 130317789 -CATT-AAC--------------T--T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84359 10 -     86153 -TGGT-AAC--------------CT-T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14355989 10 +  14710649 -TGTG-GGC--------------TT-T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63961 10 +     67721 -TGTT-AGG--------------CT-T
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794303  3 +  10118263 --------C--------------C--T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388476  3 +   6019432 --------C--------------C--T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384263  3 +   4330536 --------T--------------C--T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3297  3 +     18357 --------C--------------C--T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120636 10 +    130748 -TGTT-GGC--------------CT-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947584 10 +   3037898 -TGtt-tgc--------------tt-t
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30174 10 +     34575 TT-TT-GAC--------------CT-T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233109 10 -   7148211 -TGTT-GGC--------------TT-T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nomascus_annamensis.k141_1771965                           54590 10 -    132029 TT-TT-GAC--------------CT-T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10685 10 -     16345 TT-TT-GAC--------------CT-T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16570 10 +     22201 TT-TT-GAC--------------CT-T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414791 10 -  22158432 TT-TT-GAC--------------CT-T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26968 10 -     54323 TT-TT-GAC--------------CT-T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199109 10 +   9404916 -TGTT-GGC--------------TT-T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639088  9 + 196305487 -T-TC-TGC--------------CT-T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1691  9 -      9413 -T-TC-TGC--------------CT-T
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566471  9 - 199412804 -T-TC-TGC--------------CT-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557774  8 -   3988456 -TGTT-GG----------------T-T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056064 10 -  11899542 -TGTT-AGT--------------CT-T
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452778 10 +   2017862 -TGTT-GGC--------------TT-T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437183 11 -    630418 -TTTT-GGC--------------TTTT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15378 11 +    150152 -TTTt-gac--------------tttt
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93635 10 -    140218 -TGTT-AAC--------------CT-T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Orcinus_orca.KB316932.1                                  8103511 10 +  10937097 -TGTT-GGC--------------TT-T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                537 10 +     11607 -TGTG-GGG--------------CT-T
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104514  5 - 174332312 -------GC--------------CT-T
i Oryctolagus_cuniculus.CM000791.1                       I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40152 10 +    559221 -TGTT-GGC--------------TT-T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41639  9 -     51505 -T-TC-TGC--------------CT-T
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354642  9 +   1103335 -T-TC-TGC--------------CT-T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405088 11 -  44047080 -tttc-agc--------------tttt
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5607 11 +     17875 -TTTC-AGC--------------TTTT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473684 10 - 189151597 TT-TT-GAC--------------CT-T
i Pan_troglodytes.CM009242.2                             C 0 I 6
s Panthera_onca.PanOnc_flattened_line_3271                   25375 10 -    230217 -TATT-GGC--------------TT-T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462701 10 -  18783137 -TATT-GGC--------------TT-T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973360 10 +   8748460 -TATT-GGC--------------TT-T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616616 11 +   2937107 -TTTT-GGC--------------TTTT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244492 10 - 183742232 tt-tt-gac--------------CT-T
i Papio_anubis.CM001495.2                                I 177 C 0
s Papio_cynocephalus.k141_1507553                            10781  6 +     21308 ------GAC--------------CT-T
i Papio_cynocephalus.k141_1507553                        I 4 C 0
s Papio_hamadryas.Contig39                                  293520 10 -  20919399 tt-tt-GAC--------------CT-T
i Papio_hamadryas.Contig39                               I 170 C 0
s Papio_kindae.k141_2214839                                  23425 10 -     27687 TT-TT-GAC--------------CT-T
i Papio_kindae.k141_2214839                              I 1 C 0
s Papio_papio.k141_3538738                                      96 10 +     10553 tt-tt-GAC--------------CT-T
i Papio_papio.k141_3538738                               N 0 C 0
s Papio_ursinus.k141_1952521                                  5065 10 +      5150 tt-tt-GAC--------------CT-T
i Papio_ursinus.k141_1952521                             N 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15955 10 +     78924 -TATT-GGC--------------TT-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27969  9 +     31479 -T-TC-TGC--------------CG-T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20337  9 -     24908 -T-TC-TGC--------------CG-T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2765 10 +      9367 -TGTT-AGC--------------CT-T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32810 10 -     56120 -TGTG-ACT--------------CT-T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5037 10 -     63832 -TGTT-GGC--------------TT-T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3605 10 +     55023 TT-TT-GAC--------------CT-T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3143 10 -     89929 TT-TT-GAC--------------CT-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3733 10 +     40849 TT-TT-GAC--------------CT-T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255408 10 +  14605196 TT-TT-GAC--------------CT-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4879  3 +     22231 --------C--------------C--T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65723 10 +    207309 TT-TT-GGC--------------CT-T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6815 10 -     25401 TT-TT-GGC--------------CT-T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32559 10 +     58159 TT-TT-GGC--------------CT-T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32835 10 +     63561 TT-TT-GGC--------------CT-T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32595 10 +     51148 TT-TT-GGC--------------CT-T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557565 10 -   4542175 TT-TT-GGC--------------CT-T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32579 10 +     51125 TT-TT-GGC--------------CT-T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2054 10 +     19503 -TGTT-GGC--------------TT-T
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        8997 10 +     39866 TT-TT-GGC--------------CT-T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4079 10 -      9282 TT-TT-GGC--------------CT-T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43483 10 -     87950 TT-TT-GGC--------------CT-T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43877 10 -     88961 TT-TT-GGC--------------CT-T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8575 10 -     39403 TT-TT-GGC--------------CT-T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43526 10 +     87928 TT-TT-GGC--------------CT-T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8574 10 -     60166 TT-TT-GGC--------------CT-T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15511 10 -     67232 TT-TT-GGC--------------CT-T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43427 10 -     90634 TT-TT-GGC--------------CT-T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44894 10 +     89403 TT-TT-GGC--------------CT-T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178794 10 - 189387572 TT-TT-GAC--------------CT-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193611 10 -   9816681 TT-TT-GAC--------------CT-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28753 10 +     69807 TT-TT-GAC--------------CT-T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45934 10 -     80239 TT-TT-GAC--------------CT-T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5077 10 +      7663 -TGTT-GGC--------------CT-T
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983508  9 +   4620579 -T-TT-GGC--------------CT-T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567018  9 -   2598838 -T-TT-GGC--------------CT-T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4656  9 -      7103 -T-TT-GGC--------------CT-T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5253  9 -     11706 -T-TT-GGC--------------CT-T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8990  9 -     30655 -T-TT-GGC--------------CT-T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35304  9 +     46564 -T-TT-GGC--------------CT-T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95583  9 -     98465 -T-TT-GGC--------------CT-T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9222  9 +     35169 -T-TT-GGC--------------CT-T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38534  9 +     52041 -tttt-aat--------------t--t
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53044 17 -     66298 --------TTAGCATTATTGGCTT--T
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5563 10 -     18639 -TGTG-GGC--------------TT-T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841657 10 -  28871421 -TGTT-GGC--------------TT-T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538172 10 -   4952924 -TGTT-GGC--------------TT-T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100017 10 +  38429054 -TATT-GGC--------------TT-T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28123 10 +     91421 TT-TT-GAC--------------CT-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154607 10 -   7812017 TT-TT-GAC--------------CT-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8980 10 +     72585 TT-TT-GAC--------------CT-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54100 11 +     55069 -TTTT-GGC--------------TTTT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023817  9 -  90668790 -TGTT-AAC--------------T--T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915633 10 +   3329780 -TGCT-GGC--------------TT-T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2707 10 +      7119 TT-TT-GAC--------------CT-T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123323 10 + 195417433 TT-TT-GAC--------------CT-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237549 10 -   7961872 TT-TT-GAC--------------CT-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76156 10 -    116970 -TGTT-GGC--------------TT-T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4878 10 +     27962 TT-CT-GGC--------------CT-T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4771 10 +      6077 TT-CT-GGC--------------CT-T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4862 10 +      5971 TT-CT-GGC--------------CT-T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4783 10 +      5932 TT-CT-GGC--------------CT-T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3125 10 -      4390 TT-CT-GGC--------------CT-T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392562 10 - 209938924 TT-CT-GGC--------------CT-T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4731 10 +      5979 TT-CT-GGC--------------CT-T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1300 10 -     22275 TT-CT-GGC--------------CT-T
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8776 11 +     16473 -TTTT-GGC--------------TTTT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109897 10 + 121099817 TT-TT-GCC--------------CT-T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31464 10 -     47369 TT-TT-GCC--------------CT-T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31850 10 -     79414 TT-TT-GCC--------------CT-T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28541 10 -     34454 TT-TT-GCC--------------CT-T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15942 10 -     22428 TT-TT-GCC--------------CT-T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31096 10 -     47109 TT-TT-GCC--------------CT-T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239148 10 +   5703754 TT-TT-GGC--------------CT-T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8738 10 +     21866 TT-TT-GGC--------------CT-T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116790 10 +    313613 -TGCT-AGC--------------TT-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26449 10 +     27374 TT-TT-GAC--------------CT-T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29961 10 +     58920 TT-TT-GAC--------------CT-T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16459 10 -     45317 TT-TT-GAC--------------CT-T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24117 10 -     42441 TT-TT-GAC--------------CT-T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26795 10 -     29113 TT-TT-GAC--------------CT-T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29870 10 -     48123 TT-TT-GAC--------------CT-T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865060 10 -   1910179 -TGTT-GGC--------------TT-C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672162 10 +  18376816 -Tgct-gga--------------tt-t
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869273 10 +   3870691 -TGTT-AAC--------------TT-T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7652 10 -     97271 -TGTG-GGC--------------TT-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125791 10 +    196729 -TATT-GGC--------------TT-T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644843 10 +  69701581 -TGTT-GGC--------------TT-T
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392050 10 +   1523678 TT-TC-GAC--------------CT-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15214  4 +     22964 --------C--------------TT-T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3627 10 +      5583 -TGTT-GGC--------------CT-T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192531 10 +    199430 -TGTT-GGC--------------TT-T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106499 10 -    539355 -TGTT-GGC--------------TT-T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1562  9 +      9917 -T-TT-GGC--------------CT-C
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8360  9 +     20590 -T-TT-GGC--------------CT-C
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354301 10 - 186847797 TT-TT-GAC--------------CT-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24984 10 -     33621 -TGTT-AAT--------------CT-T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20614 10 -     31044 -TGTT-GGC--------------CT-T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481044 17 -    610378 --------CTAGCATTGTTGGCTT--T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        21994 10 +     26378 TT-TT-GAC--------------CT-T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34670 10 -     78344 TT-TT-GAC--------------CT-T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21319 10 +     25722 TT-TT-GAC--------------CT-T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29626 10 -     62838 TT-TT-GAC--------------CT-T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29670 10 +     46913 TT-TT-GAC--------------CT-T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10477 10 -     28527 TT-TT-GAC--------------CT-T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31561 10 -     64340 TT-TT-GAC--------------CT-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29599 10 -     63452 TT-TT-GAC--------------CT-T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11046 10 +     22490 TT-TT-GAC--------------CT-T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4469 10 -      6147 TT-TT-GAC--------------CT-T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11382 10 -     13050 TT-TT-GAC--------------CT-T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256612 10 -   6242583 TT-TT-GAC--------------CT-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2640 10 +     19340 TT-TT-GAC--------------CT-T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174385 11 -    200418 -TTTT-GGC--------------TTTT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482448 10 -  10818551 -TGTT-GGC--------------CT-T
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835288 10 -   4065304 -TGTG-GAC--------------TC-T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9308 10 -     70247 -TGTG-GAC--------------TC-T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366624 10 -  33153633 -TGTT-GGC--------------TT-T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4502 10 -     21056 -TGCT-GGT--------------TT-T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182953 10 +   5085361 -TGTT-GGC--------------TT-T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26164  9 -     30710 -T-TT-GGC--------------CT-T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25071  9 -    147434 -T-TT-GGC--------------CT-T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77211 10 +   5488506 -TGTC-GGC--------------TT-T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105875 10 -    112863 -TGTT-GGC--------------TT-T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175029 10 -    224448 -TGTT-AAC--------------TT-T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29986 10 -     86975 -TGTT-GGC--------------TT-T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       911  8 -      1899 ---TT-AGT--------------CT-T
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1908 10 +      2126 -TGTT-GGC--------------TT-T
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72707  0 +    143317 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Microgale_talazaci.MicTal_scaffold_6613                    47580  0 +    145209 C
e Desmodus_rotundus.KZ672289.1                            11866171  0 -  20541912 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922  6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549  6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339  6 -     41509 I
e Noctilio_leporinus.NocLep_scaffold_7894                   128981  0 -    149072 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6350 6 +     36723 T-CAAT-T
s Acinonyx_jubatus.LLWD01001279.1                           813769 6 +   1699592 T-CACT-T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26134 6 +     63021 T-CAAT-G
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416227 6 +  29979442 T-CAGT-T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216566 6 +    347723 T-CACT-T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19420 6 -     61208 T-TTAT-A
i Allactaga_bullata.AllBul_scaffold_20030                I 299 C 0
s Allenopithecus_nigroviridis.k141_3755588                   48995 6 +     53615 T-CACT-T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1026 6 +     13857 T-CAAT-T
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17577 6 -     21945 T-CAAT-T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19262 6 +     32033 T-CAAT-T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73094 6 -     84148 T-CAAT-T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45333 6 -     78289 T-CAAT-T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44772 6 +     55831 T-CAAT-T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43222 6 -     64179 T-CAAT-T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            329 6 -      3959 T-CAAT-T
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             41847 6 +     45454 T-CAAT-T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47496 6 +     70886 T-CAAT-T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9669 6 +     30854 T-CAAT-T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33803 6 +     42133 T-CAAT-T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586232 6 +   2318259 T-CACT-T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178025 6 -    412891 T-CACT-T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51339 6 -     68529 T-CACT-T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2061 6 +     17741 C-TAAT-T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2686 6 -     15923 T-TAAT-T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672968 6 +   5030052 T-TAAT-T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2962 6 -     16391 T-TAAT-T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2521 6 -     17186 T-TAAT-T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17044 6 -     32367 T-CACT-T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21130 5 -     45910 --CTGT-T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6292 6 -     15198 T-CACT-T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275559 6 +  21539123 T-CAAT-T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11727 6 +     48076 T-CAAT-T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6862 6 -     28759 T-CAAT-T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34416 6 +     44353 T-CAAT-T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49787 6 -     71267 T-CAAT-T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23845 6 -     33135 T-CAAT-T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7133 6 +     11645 T-CATT-T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7141 6 -     19611 T-CATT-T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964370 6 -  23207421 T-CACT-T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          870 6 -     25979 T-CACT-T
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87240 6 +    124022 T-CACT-T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22782 6 +    288883 T-CACT-T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357172 6 +  48749331 N-CACT-T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755736 6 +   1948126 T-CACT-T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545878 6 -  45695690 T-CACT-T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530893 6 -   4408762 T-CACT-T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8735 6 +     28062 T-CAAT-T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44029 6 -     91139 T-CAAT-T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21555 6 +     95584 T-CAAT-T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21468 6 +    119600 T-CAAT-T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11039 6 +     18648 T-CAAC-T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10557 6 -     13885 T-CAAT-T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2644 6 -      8861 T-CAAC-T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455036 6 + 189096842 T-CAAC-T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2559 6 +      8664 T-CAAC-T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631887 6 +  17673402 T-CACT-T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666174 6 +   7040546 T-CACT-T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209833 6 +   1652518 T-CACT-T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506254 6 +  60362399 T-CACT-T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9890 6 -     23171 T-CACT-T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223233 6 +   9314153 T-CACT-T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616368 6 +  59632846 T-CACT-T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107949 6 -  63665305 T-CACT-T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409961 6 -  46296322 T-CACT-T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592235 6 +  44709034 T-CACT-T
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    399 6 -      1607 C-TACT-T
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271339 6 +    496798 T-CACT-T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1150 6 +      9923 T-CACT-T
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28540 6 -     39886 T-CATT-T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80434 6 -    217609 T-CACT-C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997269 6 +  23392119 t-catg-t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000710 6 +  23407841 t-catg-t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63791 6 -     66877 T-CACG-T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5956 6 -     12580 T-CAAC-T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44014 6 +     53515 T-CAAC-T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373784 6 -  26074798 T-CAGT-T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8838 6 -     34880 T-CAGT-T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67934 6 -     89041 T-CAGT-T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3299 6 -      5494 T-CACT-T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493056 6 -  27778364 T-CACT-T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19889 6 +     27315 T-CACT-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142143 6 -   4669795 T-CAAT-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45887 6 +     47900 T-CAAT-T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1315 6 -     14410 T-CAAT-T
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45699 6 -    148725 T-CAAT-T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27909 6 -     40656 T-CAAT-T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7873 6 +     20796 T-CAAT-T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12991 6 -     17524 T-CAAT-T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28714 6 -     34525 T-CAAT-T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12494 6 -     25376 T-CAAT-T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365081 6 -  39242232 T-CAAT-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270808 6 +  21565898 T-CAAT-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33176 6 -     45857 T-CAAT-T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28077 6 -     32606 T-CAAT-T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4239 6 +      8499 T-CAAT-T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26635 6 +     70610 T-CAAT-T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23596 6 +     36323 T-CAAT-T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13544 6 -     19938 T-CACT-T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31506 6 -     33796 T-TACT-T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6020 6 -     15404 T-TACT-T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9842 6 -     32913 T-CAAT-T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20255 6 -     40346 T-CAAT-T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20510 6 +    216457 T-CAAT-T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20303 6 +     39636 T-CAAT-T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239611 6 -   2543920 T-CACT-T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4890 6 +      5346 T-CAAT-T
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43366 6 -    112038 T-CAAT-T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8917 6 +     34062 T-CAAT-T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344497 6 +  18827391 T-CAAT-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11039 6 -     44032 T-CAAT-T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305822 6 - 135778131 T-CAAT-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15677 6 +     15858 T-CACT-T
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607252 6 -    839153 T-CACT-T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_757531               2390 6 +      2406 T-TACT-T
i Chrysochloris_asiatica.ChrAsi_scaffold_757531          C 0 N 0
s Colobus_angolensis.KN981557.1                             410227 6 -   2368649 T-CAAT-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380108 6 - 200372422 T-CAAT-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3665 6 -     84244 T-CAAT-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808106 6 +  53390261 T-GACT-T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3637 6 -      8242 T-CAAT-T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 45010 6 -     83289 T-CAAT-T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115712 6 - 224834208 T-CGAT-T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10718 6 +     12657 T-AGTT-T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5218 6 +     87169 T-CACT-T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646268 6 -   1526836 T-CACT-T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19466 6 +     50838 C-TACT-T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5192 6 +     36344 T-TACA-T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28973 6 +     75252 T-CACA-T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110895 6 -   2246927 T-CACT-T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293442 6 +  12879189 T-CACT-T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632778 6 -  35494412 T-CACT-T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665340 6 -   1390856 T-CACT-T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140129 6 -    198055 T-CACT-T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99693 6 -    115145 T-CACT-T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951433 6 -  37912305 T-CATT-G
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6364 6 -     10735 T-CATT-G
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856391 6 - 111700974 T-CACT-G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7127 6 +     19438 T-CACT-T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240598 6 -    607251 T-CACT-T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226610 6 +  10337057 T-CATT-T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31849 6 +    110024 T-CAAC-T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           13820 6 +     18970 T-CAAT-T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24916978 6 +  41312741 T-CACT-T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579745 6 +  14770903 T-CACT-T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042261 6 -   4378816 T-CACT-T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376199 6 +  39960074 T-CACT-T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412181 6 -    498745 T-CACT-T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666890 6 +   7059049 A-TACT-T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264033 6 +  21539334 T-CAAT-T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71984 6 -    133382 T-CACT-T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              571 6 -      1072 T-CACT-T
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15647 6 -     24895 T-CACT-T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43357 6 -     70999 T-CACT-T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87327 6 +    112731 T-CACT-T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             43889 6 +     68309 T-CACT-T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54214 6 -     65740 T-CACT-T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24846 6 -     75513 T-CACT-T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49041 6 -     97555 T-CACT-T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5765 6 +     30972 T-CACT-T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43485 6 -     52037 T-CACT-T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              59888 6 -    111500 T-CACT-T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247679 6 - 206538554 T-CACT-T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117465 6 - 205367284 T-CACT-T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28562 6 -     30238 T-CACT-T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922844 6 -   3816255 T-CCCT-T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126500 5 -    137831 --CCCT-T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10045 5 +     22493 --CCCT-T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22115 5 -     32986 --CCTT-T
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2018 6 -     28519 T-CACT-T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92305 6 -     95226 T-CACT-T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            1683 6 -      6791 T-CACA-T
i Glis_glis.GliGli_scaffold_163929                       C 0 I 481
s Gorilla_beringei.k141_3358147                               6650 6 -      8343 T-CAAT-T
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255665 6 - 186649187 T-CAAT-T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    2812 6 -     78134 T-CACT-T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 446
s Hapalemur_alaotrensis.k141_330369                          15576 6 -     40692 T-CACT-T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             36978 6 +     49394 T-CACT-T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61846 6 -     66874 T-CACT-T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10720 6 -     42923 T-CACT-T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17719 6 -     53142 T-CACT-T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31652 6 -    327341 T-CACT-T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9979 6 +     48891 T-CACT-T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933260 6 -  22651954 T-TGCT-T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1096 6 +      8654 T-CTCT-T
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8486 6 -     36432 T-CACT-T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552480 6 -   1711038 T-CACT-T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1919 6 -      2730 T-TACT-T
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143674 6 -    630532 T-CAAT-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71046 6 +     83186 T-CACT-T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hylobates_agilis.k141_1155965                               6708 6 +     12352 T-CAAT-T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13892 6 +     55766 T-CAAT-T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053492 6 + 191637585 T-CAAT-T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802370 6 +  11177569 T-CAAT-T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8003 6 -    135385 T-CACA-T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387705 6 +   7955117 T-CACT-T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_2415743                                    3276 6 +     11955 T-CACT-T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10879 6 -     16823 T-CACT-T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240949 6 +   9596543 T-TTAT-A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72719 6 -     97402 T-CACT-T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44110 6 +    110728 T-CAAT-T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64076 6 -     65777 G-CACT-T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760369 6 +  30322482 T-CACT-T
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5012 6 -     13097 T-CAAT-T
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4766 6 +      5940 T-CAAT-T
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4589 6 -      5717 T-CAAT-T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10979 6 -     11567 T-CAAT-T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12360 6 -     12945 T-CAAT-T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9881 6 +     29618 A-CACT-T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                              9877 6 +     31569 T-CACT-T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                          9887 6 +     24756 T-CACT-T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                       9887 6 +     16388 T-CACT-T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814358 6 -   3914936 T-CACT-T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18723 6 +     24238 T-CACT-T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342064 6 +    662738 T-CACT-T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335028 6 -   1826925 T-CAAT-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12198 5 +     19643 --CCCT-T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045868 5 -   6120653 --CCCT-T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085765 6 +  43346337 C-CCCT-T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615523 6 +  59628241 T-CACT-T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46417 6 -     61512 T-CGAT-T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374079 6 -  60120075 T-CGAT-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26347 6 +     30207 T-CGAT-T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1185 6 -      5035 T-CGAT-T
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26300 6 +     30527 T-CGAT-T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37476 6 -     50087 T-CGAT-T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47220 6 +     51645 T-CGAT-T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416423 6 - 187317192 T-CGAT-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400653 6 +  25927173 T-TGAT-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49825 6 -     62418 T-CGAT-T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2356 6 +     14901 T-CGAT-T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46297 6 +     59329 T-CGAT-T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272205 6 +    668171 T-CGAT-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   843 6 -      5049 T-CGAT-T
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4003 6 +     17132 T-CGAT-T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224095 6 -    270270 T-CATT-T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323493 6 +  24302211 T-CAAT-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358324 6 -    752769 T-CAAT-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674410 6 -    737560 T-CACT-T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221710 6 +    317179 T-CACT-T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501919 6 +  40650429 T-CACT-T
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                       151256 6 +    207569 T-CACT-T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27077 6 -     74585 T-CACT-T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 51029 6 -    140813 T-CAAT-T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17430095 6 +  29670104 T-GGAT-T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88348 6 +     93471 T-CACT-T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11146 6 +     17804 T-CAAC-T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11646 6 -     12984 T-CAAC-T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19962 6 -     26561 T-CAAC-T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985719 6 +  93316391 T-TGCT-T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185944 6 +    200668 T-CACT-T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963290 6 +  27267610 T-CAAT-T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364083 6 -   8254450 T-CACT-T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42990 6 -     48117 T-CACT-T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23528 6 -     27822 T-CAAT-T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9369 6 +     27589 T-CACT-T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53502 6 -     62432 T-CGCT-T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360453 6 +    437263 T-CACT-T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180168 6 +    366855 T-CACT-T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26425 6 -     82753 T-CACT-T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19385 6 -     63510 T-CACT-T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40046 6 +     47283 G-CACT-T
i Murina_feae.MurFea_scaffold_17764                      C 0 I 8
s Mus_caroli.LT608237.1                                   35595165 6 + 120012414 T-CAAT-T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688391 6 + 129401213 T-CAAT-T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497685 6 + 130317789 T-CAAT-T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             84369 6 -     86153 T-CACT-T
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 444
s Mustela_putorius.JH418006.1                             14355999 6 +  14710649 T-CACT-T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63971 6 +     67721 C-TACT-T
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794306 6 +  10118263 T-CATT-T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388479 6 +   6019432 T-CATT-T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384266 6 +   4330536 T-CATT-T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3300 6 +     18357 T-CATT-T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120646 6 +    130748 T-CACT-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947594 6 +   3037898 t-cagt-t
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30184 6 +     34575 T-CAAT-T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233119 6 -   7148211 T-CACT-T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nomascus_annamensis.k141_1771965                           54600 6 -    132029 T-CAAT-T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10695 6 -     16345 T-CAAT-T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16580 6 +     22201 T-CAAT-T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414801 6 -  22158432 T-CAAT-T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26978 6 -     54323 T-CAAT-T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199119 6 +   9404916 T-CACT-T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639097 5 + 196305487 --CCCT-T
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1700 5 -      9413 --CCCT-T
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566480 5 - 199412804 --CCCT-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557782 6 -   3988456 T-CACG-T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056074 6 -  11899542 C-TACT-T
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452788 6 +   2017862 T-CACT-T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437194 6 -    630418 T-CACT-T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15389 6 +    150152 t-cact-t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93645 6 -    140218 T-CAAT-T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Orcinus_orca.KB316932.1                                  8103521 6 +  10937097 T-CACT-T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                547 6 +     11607 T-CACT-T
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104519 6 - 174332312 T-CACT-T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40162 6 +    559221 T-CACT-T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41648 5 -     51505 --CCCT-T
i Otolemur_crassicaudatus.k141_649260                    C 0 I 13
s Otolemur_garnettii.GL873799.1                             354651 5 +   1103335 --CCCT-T
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405099 6 -  44047080 t-cact-t
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5618 6 +     17875 T-CACT-T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             13364 7 -     26668 TCCAAT-T
i Pan_troglodytes.NBAG03003091.1                         I 139 I 63
s Panthera_onca.PanOnc_flattened_line_3271                   25385 6 -    230217 T-CACT-T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462711 6 -  18783137 T-CACT-T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973370 6 +   8748460 T-CACT-T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616627 6 +   2937107 T-CACT-T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244502 6 - 183742232 T-CAAT-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10787 6 +     21308 T-CAAT-T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293530 6 -  20919399 T-CAAT-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23435 6 -     27687 T-CAAT-T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     106 6 +     10553 T-CAAT-T
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_1952521                                  5075 6 +      5150 T-CAAT-T
i Papio_ursinus.k141_1952521                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15965 6 +     78924 T-CACT-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27978 5 +     31479 --CTGT-T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20346 5 -     24908 --CTGT-T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2775 6 +      9367 T-CACA-A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32820 6 -     56120 T-GACC-T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5047 6 -     63832 T-CACT-T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3615 6 +     55023 T-CAGT-T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3153 6 -     89929 T-CAGT-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3743 6 +     40849 T-CAGT-T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255418 6 +  14605196 T-CAGT-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4882 6 +     22231 T-CACT-T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65733 6 +    207309 T-CAAT-T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6825 6 -     25401 T-CAAT-T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32569 6 +     58159 T-CAAT-T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32845 6 +     63561 T-CAAT-T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32605 6 +     51148 T-CAAT-T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557575 6 -   4542175 T-CAAT-T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32589 6 +     51125 T-CAAT-T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2064 6 +     19503 T-CACT-T
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9007 6 +     39866 T-CAAT-T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4089 6 -      9282 T-CAAT-T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43493 6 -     87950 T-CAAT-T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43887 6 -     88961 T-CAAT-T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8585 6 -     39403 T-CAAT-T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43536 6 +     87928 T-CAAT-T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8584 6 -     60166 T-CAAT-T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15521 6 -     67232 T-CAAT-T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43437 6 -     90634 T-CAAT-T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44904 6 +     89403 T-CAAT-T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178804 6 - 189387572 T-CAAT-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193621 6 -   9816681 T-CAAT-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28763 6 +     69807 T-CAAT-T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45944 6 -     80239 T-CAAT-T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5087 6 +      7663 T-CTCT-T
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983517 6 +   4620579 T-CACT-T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567027 6 -   2598838 T-CACT-T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4665 6 -      7103 T-CACT-T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5262 6 -     11706 T-CACT-T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            8999 6 -     30655 T-CACT-T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35313 6 +     46564 T-CACT-T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95592 6 -     98465 T-CACT-T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9231 6 +     35169 T-CACT-T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38543 6 +     52041 t-caat-t
i Psammomys_obesus.NESX01036366.1                        C 0 I 53
s Pteronotus_parnellii.KE847780.1                            53061 6 -     66298 T-CACT-T
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5573 6 -     18639 T-CACT-T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841667 6 -  28871421 T-CACT-T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538182 6 -   4952924 T-CACT-T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100027 6 +  38429054 T-CACT-T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28133 6 +     91421 T-CAAT-T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154617 6 -   7812017 T-CAAT-T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8990 6 +     72585 T-CAAT-T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54111 6 +     55069 T-CACT-T
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 13
s Rattus_norvegicus.chr16                                 37023826 6 -  90668790 T-CAAT-T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915643 6 +   3329780 T-CACT-G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2717 6 +      7119 G-CAAT-T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123333 6 + 195417433 G-CAAT-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237559 6 -   7961872 G-CAAT-T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76166 6 -    116970 T-CACT-T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4888 6 +     27962 T-CAAT-T
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4781 6 +      6077 T-CAAT-T
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4872 6 +      5971 T-CAAT-T
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4793 6 +      5932 T-CAAT-T
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3135 6 -      4390 T-CAAT-T
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392572 6 - 209938924 T-CAAT-T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4741 6 +      5979 T-CAAT-T
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1310 6 -     22275 T-CAAT-T
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8787 6 +     16473 T-CACT-T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109907 6 + 121099817 T-CAGT-T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31474 6 -     47369 T-CAGT-T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31860 6 -     79414 T-CAGT-T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28551 6 -     34454 T-CAGT-T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15952 6 -     22428 T-CAGT-T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31106 6 -     47109 T-CAGT-T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239158 6 +   5703754 T-CAGT-T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8748 6 +     21866 T-CAGT-T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116800 5 +    313613 T-CACT--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26459 6 +     27374 T-CAAT-T
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29971 6 +     58920 T-CAAT-T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16469 6 -     45317 T-CAAT-T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24127 6 -     42441 T-CAAT-T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26805 6 -     29113 T-CAAT-T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29880 6 -     48123 T-CAAT-T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865070 7 -   1910179 T-CATTTT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672172 6 +  18376816 t-aatt-t
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869283 6 +   3870691 T-CACT-T
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525              7662 6 -     97271 T-CACT-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125801 6 +    196729 T-CACT-T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644853 6 +  69701581 T-CACT-C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392060 6 +   1523678 T-CAAT-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15218 6 +     22964 T-CACT-T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3637 6 +      5583 T-CACT-T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192541 6 +    199430 T-CACT-G
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106509 6 -    539355 T-CACT-G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1571 6 +      9917 T-CACT-T
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8369 6 +     20590 T-CACT-T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354311 6 - 186847797 T-CAAT-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              24994 6 -     33621 T-GGCT-T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20624 6 -     31044 T-CACT-T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481061 6 -    610378 T-CACT-T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22004 6 +     26378 T-CAAT-T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34680 6 -     78344 T-CAAT-T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21329 6 +     25722 T-CAAT-T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29636 6 -     62838 T-CAAT-T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29680 6 +     46913 T-CAAT-T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10487 6 -     28527 T-CAAT-T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31571 6 -     64340 T-CAAT-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29609 6 -     63452 T-CAAT-T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11056 6 +     22490 T-CAAT-T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4479 6 -      6147 T-CAAT-T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11392 6 -     13050 T-CAAT-T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256622 6 -   6242583 T-CAAT-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2650 6 +     19340 T-CAAT-T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174396 6 -    200418 C-CACT-T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482458 6 -  10818551 T-CACT-T
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835298 6 -   4065304 T-CATC-T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9318 6 -     70247 T-CATC-T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366634 6 -  33153633 T-CACT-T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4512 6 -     21056 T-CACT-T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182963 6 +   5085361 G-CACT-T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26173 6 -     30710 T-CACT-T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25080 6 -    147434 T-CACT-T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77221 6 +   5488506 T-CACT-T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105885 6 -    112863 T-CACT-T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175039 6 -    224448 T-CACT-T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732         29996 6 -     86975 T-CACT-T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       919 6 -      1899 T-CAAT-G
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1918 6 +      2126 T-CACT-T
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72707 0 +    143317 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Microgale_talazaci.MicTal_scaffold_6613                    47580 0 +    145209 C
e Desmodus_rotundus.KZ672289.1                            11866171 0 -  20541912 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922 6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549 6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339 6 -     41509 I
e Noctilio_leporinus.NocLep_scaffold_7894                   128981 0 -    149072 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6356 60 +     36723 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CA-T-C-AAGCGGAAATCCAAA
s Acinonyx_jubatus.LLWD01001279.1                           813775 59 +   1699592 TAACGACTACAAA-G------CGA-TATTTATTAGTAGTCA-G-TGCCT-C-TC-C-T-GAGCACTAATCCAAA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26140 26 +     63021 TAATGAGGACAAA-G------CAA-AATTCA-CGA---------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 26
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416233 42 +  29979442 TAATGACTACAAA-G------CAA-AATTTATTAGCAGTCA-G-TGCCT-C-TC--------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 16
s Ailurus_fulgens.LNAC01001112.1                            216572 59 +    347723 TAATgatttcaaa-g------caa-aatttattaaCAGTCA-G-TGCCT-C-TC-C-T-AAACACTAATCCAAA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19426 33 -     61208 TGATGAACTCAAA-G------CAA-AACTCATTCGTGCTCC---------------------------------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 24
s Allenopithecus_nigroviridis.k141_3755588                   49001 60 +     53615 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1032 60 +     13857 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17583 60 -     21945 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19268 60 +     32033 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73100 60 -     84148 TAATTAGCACAAA-G------CAA-AGTTCATTAGTGTGCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45339 60 -     78289 TAATTAGCACAAA-G------CAA-AGTTCATTAGTGTTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44778 60 +     55831 TAATTAGCACAAA-G------CAA-AGTTCATTAGTGTGCA-G-TGCCTCC-CC-A-A-AAGCACAAATCCAAA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43228 60 -     64179 TAATTAGCACAAA-G------CAA-AGTTCATTAGTGTTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            335 60 -      3959 TAATTAGCACAAA-G------CAA-AGTTCATTAGTGTGCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             41853 60 +     45454 TAATTAGCACAAA-G------CAA-AGTTCATTAGTGTGCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47502 60 +     70886 TAATTAGCACAAA-G------CAA-AGTTCATTAGTGTTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9675 60 +     30854 TAATTAGCACAAA-G------CAA-AGTTCATTAGTGTTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33809 60 +     42133 TAATTAGCACAAA-G------CAA-AGTTCATTAGTGTTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586238 60 +   2318259 TAATGAGCATGAA-G------CAAAAATTTACTGGCATTCA-G-TGCCT-C-CC-C-C-AAGTGCTAATCCAAA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178031 58 -    412891 TAATGAGCAGGAA-G------CAA-TATTTACCGGTCT-CA-G-TGCTT-C-CC-C-C-AAGCAGTAATCCAAA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51345 60 -     68529 TAATGAGCATGAA-G------CAAAAATTTACTGGTGTTCA-G-TGCCT-C-CC-C-C-AAGTGCTAATCCAAA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2067 60 +     17741 TAATTGGCACAAA-G------CAA-GATTCATTAGTATTCA-G-TGCCTGC-AC-A-A-AAGCGCAAATCCAAA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2692 60 -     15923 TAATTGGCACAAA-G------CAA-GATTCATTAGTATTCA-G-TGCCTGC-GC-A-A-AAGCGCAAATCCAAA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                672974 60 +   5030052 TAATTGGCACAAA-G------CAA-GATTCATTAGTATTCA-G-TGCCTGC-GC-A-A-AAGCGCAAATCCAAA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               2968 60 -     16391 TAATTGGCACAAA-G------CAA-GATTCATTAGTATTCA-G-TGCCTGC-GC-A-A-AAGCGCAAATCCAAA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2527 60 -     17186 TAATTGGCACAAA-G------CAA-GATTCATTAGTATTCA-G-TGCCTGC-GC-A-A-AAGCGCAAATCCAAA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17050 60 -     32367 TAATGAGCACACA-C------ACA-AATTCATTAATATTTA-G-AGTCTTC-TC-C-C-AAGAACTAATCTAAA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21135 58 -     45910 TAGTGAACTCGGA-G------TGA-TGTTTGTTGGAACTCA-G-T--CTTT-CT-C-C-AAGTGGTTATCCAAA
i Arctocebus_calabarensis.k141_1364444                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6298 58 -     15198 TAATGAGCAGGAA-G------CAA-AGTTTACTGTTAT-TG-G-TGCTT-C-CC-C-C-AAGCAGTAATCCAAA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275565 60 +  21539123 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11733 60 +     48076 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6868 60 -     28759 TAATTAGCACAAA-G------CAA-AATGCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34422 60 +     44353 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49793 60 -     71267 TAATTAGCACAAA-G------CAA-AATGCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23851 60 -     33135 TAATTAGCACAAA-G------CAA-AATGCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7139 60 +     11645 TAATGAGCACAAA-G------CAA-AATGCATTGGTATTAA-G-TATCTTC-CT-C-C-AAGCACTAATCCAAA
i Avahi_laniger.k141_2756659                             C 0 I 1
s Avahi_peyrierasi.k141_1823318                               7147 60 -     19611 TAATGAGCACAAA-G------CGA-AATGCATTGGTATTAA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Avahi_peyrierasi.k141_1823318                          C 0 I 1
s Balaenoptera_acutorostrata.KI537508.1                    7964376 59 -  23207421 TAATGAGCATGAA-G------CAA-AATTTACTAGCATTCA-G-TGACT-C-TC-C-C-AGGTGCTAATCCAAA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          876 59 -     25979 TAATGAGCATGAA-G------CAA-AATTTACTAGCATTCA-G-TGACT-C-TC-C-C-AGGTGCTAATCCAAA
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87246 60 +    124022 TAATGAGCATGAA-G------CAAAAATTTACTAGCATTCA-G-TGCCT-C-CC-C-C-AAGTGATAATCCAAA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22788 60 +    288883 TAATGAGCATGAA-G------CAAAAATTTACTAGCATTCA-G-TGCCT-C-CC-C-C-TAGTGCTAATCCAAA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357178 60 +  48749331 TAATGAGCATGAA-G------CAAAAATTTACTAGCATTCA-G-TGCCT-C-CC-C-C-TAGTGCTAATCCAAA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755742 60 +   1948126 TAATGAGCATGAA-G------CAAAAATTTACTAGCATTCA-G-TGCCT-C-CC-C-C-TAGTGCTAATCCAAA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545884 60 -  45695690 TAATGAGCATGAA-G------CAAAAATTTACTAGCATTCA-G-TGCCT-C-CC-C-C-TAGTGCTAATCCAAA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530899 60 -   4408762 TAATGAGCATGAA-G------CAAAAATTTACTAGCATTCA-G-GGCCT-C-CC-C-C-TAGTGCTAATCCAAA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8741 60 +     28062 TAACTGACGCAAA-G------CAA-AATTCATTAGTGTTCA-G-TGCCTCC-CT-A-C-GAGCGCAAGCCCAAA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44035 60 -     91139 TAACTGACGCAAA-G------CAA-AATTCATTAGTGTTCA-G-TGCCTCC-CT-A-C-GAGCGCAAGCCCAAA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21561 60 +     95584 TAACTGACGCAAA-G------CAA-AATTCATTAGTGTTCA-G-TGCCTCC-CT-A-C-GAGCGCAAGCCCAAA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21474 60 +    119600 TAACTGACGCAAA-G------CAA-AATTCATTAGTGTTCA-G-TGCCTCC-CC-A-C-GAGCGCAAGCCCAAA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11045 60 +     18648 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10563 60 -     13885 TGATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAGATCCAAA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2650 60 -      8861 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455042 60 + 189096842 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2565 60 +      8664 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631893 60 +  17673402 TAATGAGCACGAA-G------CAA-AATTTATTAGCATTCATG-TGCCT-C-CC-C-C-AAGCATTAATCCAAA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666180 60 +   7040546 TAATGAGCACGAA-G------CAA-AATTTATTAGCATTCATG-TGCCT-C-CC-C-C-AAGCATTAATCCAAA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209839 60 +   1652518 TAATGAGCACGAA-G------CAA-AATTTATTAGCATTCATG-TGCCT-C-CC-C-C-AAGCATTAATCCAAA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506260 59 +  60362399 TAACGACTACAAA-G------CAA-AATTTATTAGGAGCCA-G-TGCCT-C-TC-C-T-AAACACTAATCCAAA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9896 59 -     23171 TAACGACTACAAA-G------CAA-AATTTATTAGGAGCCA-G-TGCCT-C-TC-C-T-AAACACTAATCCAAA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223239 59 +   9314153 TAACGACTACAAA-G------CAA-AATTTATTAGGAGCCA-G-TGCCT-C-TC-C-T-AAACACTAATCCAAA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616374 59 +  59632846 TAACGACTACAAA-G------CAA-AATTTATTAGGAGCCA-G-TGCCT-C-TC-C-T-AAACACTAATCCAAA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45107955 59 -  63665305 TAACGACTACAAA-G------CAA-AATTTATTAGGAGCCA-G-TGCCT-C-TC-C-T-AAACACTAATCCAAA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27409967 60 -  46296322 TAATGAGCATGAA-G------CAAAAATTTACTAGCATTCA-G-TGCCT-C-CC-C-C-AAGTGCTAATCCAAA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592241 60 +  44709034 TAATGAGCATGAA-G------CAAAAATTTACTAGCATTCA-G-TGCCT-C-CC-C-C-AAGTGCTAATCCAAA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    405 59 -      1607 TAATGAACACAAA-A------CAA--ATTCATTAGTGTAGG-G-TTTCCTC-CC-C-A-AAGCACAAATCTAAA
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271345 60 +    496798 TCACGAACACAGG-G------CAA-ATTTTATTAGTCTTCA-G-TGCCTTT-CC-C-C-AAGCACTAATCCAGA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1156 58 +      9923 TAATGAGCAGGAA-G------CAA-AAGTTACCGGCAT-CA-G-CGCGC-C-CC-C-C-AAGCAGTAATCCAAA
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28546 43 -     39886 TAATGAGCACAAA-G------TGA-AATTCTTAACTGTTCA-G-TATCTTC-TC--------------------
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 16
s Catagonus_wagneri.CatWag_scaffold_2839                     80440 59 -    217609 TAATGAGCATGAA-G------GAA-AATTTACTACCATTCA-G-TGTCT-T-CC-C-C-ATGCACTAATCCAAA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997275 59 +  23392119 taaTGAACACAGA-G------CAA--ATTCATGAGTGAACA-G-TGCCTTC-TC-C-C-AAGCATGAATCTGAA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000716 59 +  23407841 taATGAACACAGA-G------CAA--ATTCATGAGTGAACA-G-TGCCTTC-TC-C-C-AAGCATGAATCTGAA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63797 59 -     66877 TAATGAACACAGA-G------CAA--ATTCATGAGTGAACA-G-TGCCTTC-TC-C-C-AAGCATGAATCTGAA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           5962 60 -     12580 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGTGCAACTCCAAA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44020 60 +     53515 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGTGCAAATCCAAA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373790 60 -  26074798 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGTGCAAATCCAAA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8844 60 -     34880 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGTGCAAATCCAAA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                67940 60 -     89041 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGTGCAAATCCAAA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3305 60 -      5494 TCATGAACACAGG-G------CAA-ATTTTATTAGTCTTCA-G-TGCCTTC-CC-C-C-AAGCCCTAATCCAGA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493062 59 -  27778364 TAATGAGCACAAA-G------CAA-AATTTATTAGCATTCA-G-TGCCT-C-CC-C-C-AAGCACTAATCCAAA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19895 59 +     27315 TAATGAGCACAAA-G------CAA-AATTTATTAGCATTCA-G-TGCCT-C-CC-C-C-AAGCACTAATCCAAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142149 60 -   4669795 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45893 60 +     47900 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1321 60 -     14410 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAGA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45705 60 -    148725 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27915 60 -     40656 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7879 60 +     20796 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            12997 60 -     17524 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAGATCCAAA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28720 60 -     34525 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12500 60 -     25376 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365087 60 -  39242232 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270814 60 +  21565898 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33182 60 -     45857 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28083 60 -     32606 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4245 60 +      8499 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26641 60 +     70610 TAATTGCCTCAAA-G------CAA-AATTCGCTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23602 60 +     36323 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAGATCCAAA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13550 59 -     19938 TAACGAGCATGAA-G------CAA-AATTCATTAGCATCCA-G-GGCCCCT-T--C-C-AAACACTAACGCACA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31512 60 -     33796 TAATGAGCACAGA-G------CGA-AATGCATTGGTATTCA-G-TATCTTC-AC-C-C-AAACACTAATCCAAA
i Cheirogaleus_major.k141_666340                         C 0 I 1
s Cheirogaleus_medius.k141_759766                             6026 60 -     15404 TAATGAGCACAGA-G------CGA-AATGCATTGGTATTCA-G-TGTCTTC-AC-C-C-AAACACTAATCCAAA
i Cheirogaleus_medius.k141_759766                        C 0 I 1
s Cheracebus_lucifer.k141_2312002                             9848 60 -     32913 TAATTGACACAAA-G------CAA-AATTCATTAGTATTCA-G-TGTCTCC-CC-A-C-AAGCGCAAGTCCAAA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20261 60 -     40346 TAATTGACACAAA-G------CAA-AATTCATTAGTATTCA-G-TGTCTCC-CC-A-C-AAGCGCAAGTCCAAA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20516 60 +    216457 TAATTGACACAAA-G------CAA-AATTCATTAGTATTCA-G-TGTCTCC-CC-A-C-AAGCGCAAATCCAAA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20309 56 +     39636 T----GACACAAA-G------CAA-AATTCATTAGTATTCA-G-TGTCTCC-CC-A-C-AAGCGCAAGTCCAAA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239617 59 -   2543920 TAATGATCACAAA-G------CAA--ATTCATTAGTGTACA-G-TGCCTTC-CC-T-C-AAGCACAAATCCGAA
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4896 60 +      5346 TAATTATCACAAA-G------AGA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43372 60 -    112038 TAACTGACGCAAG-G------CAA-AATTCGTTAGCGTTCA-G-TGCCTCC-CC-A-C-GAGCGCAAGCCCAAA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8923 60 +     34062 TAACTGACGCAAG-G------CAA-AATTCGTTAGCGTTCA-G-TGCCTCC-CC-A-C-GAGCGCAAGCCCAAA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344503 60 +  18827391 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11045 60 -     44032 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305828 60 - 135778131 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15683 59 +     15858 TAATGAGCATGGA-A------CAA-AATGCATTAGTATTCA-G-TGGCTCT-T--C-C-AAACACTAATCCAAA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607258 59 -    839153 TAATGAGCATGGA-A------CAA-GATGCATTAGTATTCA-G-TGGCTCT-T--C-C-AAACACTAATCCAAA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2619757               189 61 +       452 TAATGAGCGGAAA-G------CAA-AATTCATTAGTATTCA-G-TGTCTTCTTC-C-C-AAACTCTAATCCAAA
i Chrysochloris_asiatica.ChrAsi_scaffold_2619757         N 0 N 0
s Colobus_angolensis.KN981557.1                             410233 60 -   2368649 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380114 60 - 200372422 TAATTGCCACAAA-G------CAG-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3671 60 -     84244 TAATTGCCACAAA-G------CAG-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808112 60 +  53390261 TAATGAACATGAA-A------CAG-AATTCTTCAGTATTCA-G-ATCTTCT-CC-A-C-AAGCACGAATCCAAA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3643 59 -      8242 TAATGAGCATGAA-G------CAA-GCTTTATTAGCATCCA-A-TGCCT-C-CC-T-T-GAGCAGTAATACAAA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 45016 27 -     83289 TAATGAGCACAAA-G------CGA-AATTCACCAA---------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 102
s Cricetulus_griseus.LT883664.1                          213115718 27 - 224834208 GAATGAGCACAAA-G------CTA-AATTCATTAT---------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 58
s Crocidura_indochinensis.CroInd_scaffold_77846              10724 21 +     12657 TAATGAATATGAA-G------CAA-AATT---------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 20
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5224 59 +     87169 TAACGACTACAAA-G------CAG-TATTTATTAGCAGTCA-G-TGCCT-C-TC-C-T-AAGCACTAATCCAAA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646274 60 -   1526836 TAATGAGCACAAA-G------CAA-AATTCATTAGTATTTA-G-TGCCTTC-TT-C-C-AAGCATAACTTCAAA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19472 59 +     50838 TAATGAACATAAA-A------CAA--ATTCACTAGTGTACA-G-TTCCTTC-CC-C-A-AAGCACAAATCTGAA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5198 59 +     36344 TAATGAACACAAA-G------CAA--ATTCATTAATGTACA-G-TGCCTTA-CC-G-A-AAGCACGAATCTGAA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            28979 59 +     75252 TAAGGAACACAAA-G------CAA--ATTCATTAGTGTACA-G-TGCCTTC-CC-C-C-AAGCACGAATCTGAA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110901 59 -   2246927 TAATAAGCATGAA-G------CAA-AATTCATTCGCATTCA-G-TGCCTCT-T--C-C-AAACACGCATCCACA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293448 60 +  12879189 TAATGGGCACAAA-G------TAA-AATTCACTGGCATTCA-G-TGTCTTC-CC-C-C-AAGCACTAATCCAAA
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Delphinapterus_leucas.KZ290073.1                        18632784 59 -  35494412 TAATGAGCATGAA-G------CAA-AATTTACTAGCATTCA-G-TGACT-C-TA-C-C-AGGTGCTAATCCAAA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866171 55 -  20541912 ---TGCACATGAA-G------CAA-AATGTACTGGTAT-CA-G-TGCCT-C-CC-C-C-AAGCAGTAATCCAAA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665346 59 -   1390856 TAATGAGCACAAA-G------CAA-AATTTATTAGCATTCA-G-TGCCT-C-CC-C-C-AAGCACTAATCCAAA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140135 59 -    198055 TAATGAGCACAAA-G------CAA-AATTTATTAGCATTCA-G-TGCCT-C-CC-C-C-AAGCACTAATCCAAA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99699 42 -    115145 TAATGATCACAAA-G------CAA--ATTCCTTGGTGTGTA-G-TGCCTTC-CC--------------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 16
s Dipodomys_ordii.KN672350.1                              18951439 60 -  37912305 TAATGAGCACAAA-G------TGA-AATTCGTTAGTATTAA-A-TGCCTTC-CG-T-A-AAGCACTAATCTGAA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6370 60 -     10735 TAATGAGCACAAA-G------TGA-AATTTGTTAGTATTAA-G-TGCCTTC-AG-T-A-AAGCACTAATCTGAA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856397 56 - 111700974 TAATGAGTATGAA-G------CAA-AGTTCCTTAGTATTCA-A-TGCCATTCCC-C-C-AAGGTCTAAT-----
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7133 59 +     19438 TAATAAGCACACA-G------CAA-AATTTATTAGCATTCA-G-TGCCT-C-CC-G-C-AGGCAGTAGTCCAAA
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240604 60 -    607251 TAATGAGCATGAA-A------CAAAGATTTACTAGTGTTCA-G-TGCCT-C-CC-C-C-AAGTGCTAATCCAAA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226616 60 +  10337057 TAATGAGTATAGA-G------AAA-AATTCATTAGCATTCA-G-TACCTCC-CC-C-T-AAGCTCTAATACAAA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          31855 27 +    110024 GAATGAGCACAAA-G------AAA-AACTTACTAA---------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 249
s Ellobius_talpinus.LOJH01026522.1                           13826 27 +     18970 GAATGTGCACAAA-G------CAA-AACTTACTAA---------------------------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 246
s Enhydra_lutris.KZ291758.1                               24916984 46 +  41312741 TAATGACTACAAA-G------C--------------AGACA-G-TGCCT-C-TC-C-T-AAGCACTAATCCAAA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579751 59 +  14770903 TAATGAGCACGAA-G------CAA-AATTTATTAGTATTCA-G-TGCTT-C-CT-C-C-AAGCAGTAATCCACA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042267 59 -   4378816 TAATGAGCACGAA-G------CAA-AATTTATTAGCATTCA-G-TGCCT-C-CC-C-T-GAGCACTAATCCAAA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376205 59 +  39960074 TAAGGAGCACGAA-G------CAA-AATTTATCAGCATTCA-G-TGCCT-C-CC-C-T-GAGCACTAATCCAAA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412187 59 -    498745 TAAGGAGCACGAA-G------CAA-CATTTATCAGCATTCA-G-TGCCT-C-CC-C-T-GAGCACTAATCCAAA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3666896 60 +   7059049 TAATGAGCACAAA-G------CAA-TATTCATAGGCCTTCA-T-TGTATCC-CC-A-C-AACTACTAATCTAAA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264039 60 +  21539334 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           71990 59 -    133382 TAATGAGCATGAA-G------CAA-AATTTACTAGCATTCA-G-TGACT-C-TC-C-C-AGGTGCTAATCCAAA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              577 59 -      1072 TAATGAGCATGAA-G------CAA-AATTTACTAGCATTCA-G-TGACT-C-TC-C-C-AGGTGCTAATCCAAA
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15653 60 -     24895 TGATGAGCACAAA-G------CGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Eulemur_albifrons.k141_51491                           C 0 I 1
s Eulemur_collaris.k141_601111                               43363 60 -     70999 TGATGAGCACAAA-G------TGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Eulemur_collaris.k141_601111                           C 0 I 1
s Eulemur_coronatus.k141_384460                              87333 60 +    112731 TGATGAGCACAAA-G------TGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Eulemur_coronatus.k141_384460                          C 0 I 1
s Eulemur_flavifrons.k141_433119                             43895 60 +     68309 TGATGAGCACAAA-G------CGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Eulemur_flavifrons.k141_433119                         C 0 I 1
s Eulemur_fulvus.k141_636316                                 54220 60 -     65740 CGATGAGCACAAA-G------CGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Eulemur_fulvus.k141_636316                             C 0 I 1
s Eulemur_macaco.k141_1562045                                24852 60 -     75513 TGATGAGCACAAA-G------CGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Eulemur_macaco.k141_1562045                            C 0 I 1
s Eulemur_mongoz.k141_232305                                 49047 60 -     97555 TGATGAGCACAAA-G------CGA-AATGCACTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Eulemur_mongoz.k141_232305                             C 0 I 1
s Eulemur_rubriventer.k141_1423786                            5771 60 +     30972 TGATGAGCACAAA-G------CGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Eulemur_rubriventer.k141_1423786                       C 0 I 1
s Eulemur_rufus.k141_514691                                  43491 60 -     52037 TGATGAGCACAAA-G------TGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Eulemur_rufus.k141_514691                              C 0 I 1
s Eulemur_sanfordi.k141_1122526                              59894 60 -    111500 TGATGAGCACAAA-G------CGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Eulemur_sanfordi.k141_1122526                          C 0 I 1
s Felis_catus.CM001381.2                                 186247685 59 - 206538554 TAACGACTACAAA-G------CGA-TATTTATTAGCAGTCA-G-TGCCT-C-TC-C-T-GAGCACTAATCCAAA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117471 59 - 205367284 TAACGACTACAAA-G------CGA-TATTTATTAGCAGTCA-G-TGCCT-C-TC-C-T-GAGCACTAATCCAAA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28568 59 -     30238 TAACGACTACAAA-G------CGA-TATTTATTAGCAGTCA-G-TGCCT-C-TC-C-T-GAGCACTAATCCAAA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922850 59 -   3816255 TAGTGAGCACAAG-T------AAA--ATTCATTAGTGTATA-G-TACCTTC-CC-C-T-TCGCACAAAGCTGAA
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126505 60 -    137831 TAGTGAATTCAGA-G------TGA-TGTTCGTTGGTGCTCG-G-TGTCTTT-CT-C-C-AAGTGCTTATCCAAA
i Galago_moholi.ctg3793                                  C 0 I 1
s Galago_senegalensis.k141_991736                            10050 60 +     22493 TAGTGAATTCAGA-G------TGA-TGTTCGTTGGTGCTCG-G-TGTCTTT-CT-C-C-AAGTGCTTATCCAAA
i Galago_senegalensis.k141_991736                        C 0 I 1
s Galagoides_demidoff.k141_561628                            22120 60 -     32986 TAGTGAATTCAGA-G------TGA-CGTTTGTTGGTGCTCA-G-TGTCTTT-CT-C-T-AAGTGCTTATCCAAA
i Galagoides_demidoff.k141_561628                        C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_51812                2024 59 -     28519 TAATGAACACATA-G------CAG-AATTCGCTTGTATTCA-G-GGTCTTC-CC-T-T-AAGCACTAGTCC-AA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92311 60 -     95226 TAATGAGCATGAA-G------CAAAAATTTACTAGCCTTCA-G-TGCCT-C-CC-C-C-AAGTGCTAATCCAAA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2170 59 -      6791 tAAATGGCACAAA-G------CAA-AATTAATTAGTATT-A-G-CGCCTTT-CC-C-T-GAGCATTAATCTGAA
i Glis_glis.GliGli_scaffold_163929                       I 481 C 0
s Gorilla_beringei.k141_3358147                               6656 60 -      8343 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCGTCC-CA-T-C-AAGTGGAAATCCAAA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255671 59 - 186649187 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CA-T-C-AAGC-GAAATCCAAA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3264 27 -     78134 taAATGGCACAAA-G------CAA-AATTCATTAT---------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               I 446 I 10
s Hapalemur_alaotrensis.k141_330369                          15582 60 -     40692 TAATGAGCACAAA-G------TGA-AATGCATTGGTATTCA-G-TATCTTC-CT-C-C-AAGCACTAATCCAAA
i Hapalemur_alaotrensis.k141_330369                      C 0 I 1
s Hapalemur_gilberti.k141_646465                             36984 60 +     49394 TAATGAGCACAAA-G------TGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Hapalemur_gilberti.k141_646465                         C 0 I 1
s Hapalemur_griseus.k141_763500                              61852 60 -     66874 TAATGAGCACAAA-G------TGA-AATGCATTGGTATTCA-G-TATCTTC-CT-C-C-AAGCACTAATCCAAA
i Hapalemur_griseus.k141_763500                          C 0 I 1
s Hapalemur_meridionalis.k141_258450                         10726 60 -     42923 TAATGAGCACAAA-G------TGA-AATGCATTGGTATTCA-G-TATCTTC-CT-C-C-AAGCACTAATCCAAA
i Hapalemur_meridionalis.k141_258450                     C 0 I 1
s Hapalemur_occidentalis.k141_578367                         17725 60 -     53142 TAATGAGCACAAA-G------TGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Hapalemur_occidentalis.k141_578367                     C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585                31658 59 -    327341 TAACGACTACAAA-G------CAG-TATTTATTTGCAGTCA-G-TGCCT-C-TC-C-T-AAGCACTAATCCAAA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                  9985 60 +     48891 TAATGAGCATGAA-G------CAAAAATTTACTAGCATTCA-G-TGCCT-C-CC-C-C-AAGTGCTAATCCAAA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933266 59 -  22651954 TAATGAGCACAAT-G------CAA--ATTCATCAGTGTACA-G-TGTCTTC-CC-C-T-GTGCACAAAGCTGAA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1102 60 +      8654 TAGTGAGCATGAA-C------CCA-GGCTCATCAGCATTCA-G-TGTCTCC-CC-C-C-AGGCTCTAATCCAGA
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8492 59 -     36432 TAATCACCATGAA-G------CAA-AATTTACTAACTCTCA-G-TGCCT-C-CC-C-C-AGGCCCTAATCCAAA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552486 49 -   1711038 TAGTAAGCACGAA-G------CAA-AATTTATTAGCATTCA-G-TGCCT-C-CC-C-C-AAGCA----------
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               1925 49 -      2730 TAATAAGCATGAA-G------CGA-AATTTGTTAGCATTTA-G-TGCCT-C-CC-C-C-AAGCA----------
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143680 60 -    630532 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CC-T-C-AAGCAGAAATCCAAA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71052 59 +     83186 TAACGACTACAAA-G------CAA-TATTTATTAGCAGTCA-G-TGCCT-C-TC-C-T-AAGCTCTAATCCAAA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72707 28 +    143317 ----------------------------------------A-G-TGCCTTG-TC-C-C-AAGCATGTATCTGAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6714 60 +     12352 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CC-T-C-AAGCAGAAATCCAAA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13898 60 +     55766 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CC-T-C-AAGCAGAAATCCAAA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053498 60 + 191637585 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CC-T-C-AAGCAGAAATCCAAA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802376 60 +  11177569 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CC-T-C-AAGCAGAAATCCAAA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8009 60 -    135385 TAATGAACACAAA-G------CAA-AATTCATTAGCATACA-G-TGCCTTC-CC-C-C-AAGTGCAGATCTGAA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387712 60 +   7955117 TAATGagcataaa-a------caa-aattcattagTATTCA-G-TGCCTTT-CT-T-C-AATCATTCATCCATA
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_2415743                                    3282 60 +     11955 TAATGAGCACAAA-G------TGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAGA
i Indri_indri.k141_2415743                               C 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_69447               10885 59 -     16823 TAATGAGCATGAA-G------CAA-AATTTACTAGCATTCA-G-TGACT-C-TA-C-C-AGGTGCTAATCCAAA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1240955 33 +   9596543 TAATGAACTCAAA-G------CAA-AACTCATTAGTGCTCC---------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 I 24
s Kogia_breviceps.KogBre_flattened_line_3970                 72725 59 -     97402 TAATGAGCATGAA-G------CAA-AATTTACTAGCATTCA-G-TGACT-C-TA-C-C-AGGTGCTAATCCAAA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44116 60 +    110728 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64082 59 -     65777 TAATGAGCACGAA-G------CAA-CATTTATTAGCATTCA-G-TGCCT-C-CT-C-C-AAGCAGTAATCCACA
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760375 60 +  30322482 TAATGAGCACAAA-G------TGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Lemur_catta.scaffold_24                                C 0 I 1
s Leontocebus_fuscicollis.k141_2994775                        5018 60 -     13097 TAATTATCACAAA-G------AAA-AATTCATTACTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4772 60 +      5940 TAATTATCACAAA-G------AAA-AATTCATTACTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4595 60 -      5717 TAATTATCACAAA-G------AAA-AATTCATTACTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    10985 61 -     11567 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-CGCCTCC-CCCA-A-AAGCGCAAATCCAAA
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12366 61 -     12945 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-CGCCTCC-CCCA-A-AAGCGCAAATCCAAA
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9887 60 +     29618 TAATGAGCACAAA-G------CAA-AATGCACTGATATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Lepilemur_ankaranensis.k141_567626                     C 0 I 1
s Lepilemur_dorsalis.k141_387009                              9883 60 +     31569 TAATGAGCACAAA-G------CAA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Lepilemur_dorsalis.k141_387009                         C 0 I 1
s Lepilemur_ruficaudatus.k141_330196                          9893 60 +     24756 TAATGAGCACAAA-G------CAA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 1
s Lepilemur_septentrionalis.k141_360456                       9893 60 +     16388 TAATGAGCACAAA-G------CAA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Lepilemur_septentrionalis.k141_360456                  C 0 I 1
s Leptonychotes_weddellii.KB714746.1                        814364 59 -   3914936 TAATGACtacaaa-g------caa-aatttattaGCAGTCA-G-TGCCT-C-TC-C-T-AAGCACTAATCCAAA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18729 60 +     24238 TAATGAACACAAA-G------CAA-GAATCATTAGGAGTCA-G-TGCCTTC-CC-C-T-AAGCACTTATCCAAA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342070 59 +    662738 TAATGAGCATGAA-G------CAA-AATTTACTAGCATTCA-G-TGACT-C-TA-C-C-AGGTGCTAATCCAAA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335034 60 -   1826925 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12203 60 +     19643 TAGTGAACTCAGA-G------GGA-TGTTTGTTGGTACTCA-G-TGTCTTT-CT-C-C-AAGTGCTTATCCAAA
i Loris_lydekkerianus.k141_2031736                       C 0 I 1
s Loris_tardigradus.ctg83                                  5045873 60 -   6120653 TAGTGAACTCAGA-G------GGA-TGTTTGTTGGTACTCA-G-TGTCTTT-CT-C-C-AAGTGCTTATCCAAA
i Loris_tardigradus.ctg83                                C 0 I 1
s Loxodonta_africana.GL010049.1                           39085771 59 +  43346337 TAATGAGCAGGAA-C------CAA-AATTCATTGGTATTCA-A-TGCCTCC--C-C-C-AAGCTCTAATCCAAA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615529 59 +  59628241 TAACGACTACAAA-G------CAA-AATTTATTAGGAGCCA-G-TGCCT-C-TC-C-T-AAACACTAATCCAAA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46423 60 -     61512 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374085 60 -  60120075 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26353 60 +     30207 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1191 60 -      5035 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26306 60 +     30527 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37482 60 -     50087 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47226 60 +     51645 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416429 60 - 187317192 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400659 60 +  25927173 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49831 60 -     62418 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2362 60 +     14901 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46303 60 +     59329 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272211 60 +    668171 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   849 60 -      5049 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4009 60 +     17132 TAATTGCCACAAA-G------CAA-ACTTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224101 59 -    270270 TAATAAGCACAAA-G------CAA-AATTTATTAGCATTCA-G-TGCCT-C-CC-G-C-AAGCAGTAGTCCAAA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323499 60 +  24302211 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358330 60 -    752769 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674416 59 -    737560 CAATGAGCATGAA-G------CAA-AATTTATTAGAATTCA-G-TGCCT-C-CC-G-C-AAACACTGATCCAAA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221716 59 +    317179 CAATAAGCACGAA-G------CAA-AATTTATTAGAATTCA-G-TGCCT-C-CC-C-C-AAACACTGATCCAAC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7501926 60 +  40650429 TAATGAgcttaaa-a------caa-aattcattagTATTCA-G-TGCCTTC-CT-T-C-AATCACTAATCCATA
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151262 59 +    207569 TAATGAGCATGAA-G------CAA-AATTTGCTAGCCTTCA-G-CGCCG-C-CC-G-C-AAGTAGTAATCCAGA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27083 59 -     74585 TAATGACTACAAA-G------CAA-AATTTATTAGCAGACA-G-TGCCT-C-TC-C-T-AAGCACTAATCCAAA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 51035 27 -    140813 TAATGAGCACAAA-G------CAA-AATTCATCAA---------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 26
s Mesocricetus_auratus.KB708134.1                         17430101 27 +  29670104 GAATGAGCACAAA-G------CCA-AATTCACTAA---------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 58
s Mesoplodon_bidens.MesBid_scaffold_6114                     88354 59 +     93471 TAATGAGCATGAA-G------CAA-AATTTACTAGCATTCA-G-TGACT-C-TA-C-C-AGGTGCTAATCCAAA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11152 54 +     17804 TAATTAGCACAAA-G------CA-------ATTAGTATTCA-G-TGCCTCC-CC-A-A-AAACGCAAATCCAAA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11652 54 -     12984 TAATTAGCACAAA-G------CA-------ATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     19968 54 -     26561 TAATTAGCACAAA-G------CA-------ATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985725 60 +  93316391 TAATGAGCACAGA-G------CGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-ACGCACTAATCCAAA
i Microcebus_murinus.CM007674.1                          C 0 I 1
s Microgale_talazaci.MicTal_scaffold_6613                    47580 51 +    145209 ----------GAA-G------CAA-GATTTATTAGTATTCC-A-CGCCATTCCC-C-C-CAGGTCTCATCCACA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                185950 58 +    200668 TAATGAGCAGGAA-G------CAA-AATTTACCGGTAT-CA-G-CGCCT-C-CC-C-C-AAGCAGTAATCCAAA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963296 27 +  27267610 GAATGAGCACAAA-G------CAA-AACTTACTAA---------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 308
s Miniopterus_natalensis.LDJU01000034.1                    6364089 59 -   8254450 TAATGAGCACAAA-G------CAA-AATTTATTAGTATTCA-G-TGCCT-C-CT-C-C-AAGCAGTAATCCAAA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             42996 59 -     48117 TAATGAGCACAAA-G------CAA-AATTTATTAGTATTCA-G-TGCCT-C-CT-C-C-AAGCAGTAATCCAAA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23534 60 -     27822 TAATTGCCTCAAA-G------CAA-AATTCACTAGTATTCA-A-TGCTTAT-CC-C-C-ATGTGCAAATCCAAA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9375 59 +     27589 TAATGACTACAAA-G------CAA-AATTTATTAGCAGTCA-G-TGCCT-C-TC-C-T-AAGCACTAATCCAAA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53508 60 -     62432 TAATGAGCACAGA-G------CGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-ATGCACTAATCCAAA
i Mirza_zaza.k141_766280                                 C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_103                   360459 59 +    437263 TAATGAGCATGAA-G------CAA-AATTTACTAGCATTCA-G-TGACT-C-TA-C-C-AGGTGCTAATCCAAA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180174 58 +    366855 TAATGAGCACAAA-G------CAA-AATTTATTAGTAT-CA-G-TGCCT-C-CA-C-C-AGGCAGTAATCCAAC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26431 60 -     82753 TAATGAGGATGAA-G------CAAAAATTTACTAATGTTCA-G-TTCCT-C-CC-C-C-AAGTGCTAATCCAAA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19391 59 -     63510 TAATGACTACAAA-G------CAA-TATTTATTAGCAGTCA-G-TGCCT-C-TT-C-T-AAGCACTAATCCAAA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40060 42 +     47283 -------------------------AGTTTATTAGTATTCA-G-TGCCT-C-CT-C-C-AAGCAGTAATCCACA
i Murina_feae.MurFea_scaffold_17764                      I 8 C 0
s Mus_caroli.LT608237.1                                   35595171 27 + 120012414 TAATGAGTACAAA-G------CAA-AATTCACCAA---------------------------------------
i Mus_caroli.LT608237.1                                  C 0 I 21
s Mus_musculus.chr8                                       41688397 27 + 129401213 TAATGAGTACAAA-G------CAA-AATTCACCAA---------------------------------------
i Mus_musculus.chr8                                      C 0 I 21
s Mus_spretus.CM004101.1                                  39497691 27 + 130317789 TAATGAGTACAAA-G------CAA-AATTCACCAA---------------------------------------
i Mus_spretus.CM004101.1                                 C 0 I 21
s Muscardinus_avellanarius.MusAve_scaffold_12866             84819 60 -     86153 GAAATGGCACAAA-G------CAG-AAATCATTAATGTTTA-G-CACCTTC-CC-C-T-GAGCATTAACCGGAA
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 444 C 0
s Mustela_putorius.JH418006.1                             14356005 46 +  14710649 TAATGACTACAAA-G------C--------------AGACA-G-TGCTT-C-TC-C-T-AAACACTAATCCAAA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     63977 59 +     67721 TGATGAACACAAA-A------CAA--ATTGATTAGTTTACA-C-TTTCCTC-CC-C-A-AAGCACAAATCTGAA
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794312 58 +  10118263 TAATGAGCGCGAA-G------CAA--ATTTGTTAGTATTCA-G-TGCCT-C-CT-C-C-AAGAAGTAATCCACA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388485 59 +   6019432 TAATGTGCGCGAA-G------CAA-AATTTATTAGTATTCA-G-TGCCT-C-CT-C-C-AAGCAGTAATCCACA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384272 59 +   4330536 TAATGAGCGCGAA-G------CAA-AATTTATTAGCATTCA-G-TGCCT-C-CT-C-C-AAGCAGTAATCCACA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3306 59 +     18357 TAATGAGCGCGAA-G------CAA-AATTTATTAGTTTTCA-G-TGCCT-C-CT-C-C-AAGCAGCAATCCACA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120652 59 +    130748 TGATGAGCATGAA-A------CAA-AATGCATTAGTATTCA-G-TGCCTCT-T--C-C-AAACACTAATCCAAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947600 58 +   3037898 taatgagaaCAAA-G------CAA-TATTTATTA-TGTTCA-A-TGCCTT--AT-T-C-AAGTACTAATCTAAA
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30190 60 +     34575 TAATTGCCACAAA-G------CAA-AATTTACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233125 59 -   7148211 TAATGAGCATGAA-G------CAA-AATTTACTAGCATTCA-G-TGACT-C-TA-C-C-AGGTGCTAATCCAAA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nomascus_annamensis.k141_1771965                           54606 60 -    132029 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CC-T-C-AAGCAGAAATCCGAA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10701 60 -     16345 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CC-T-C-AAGCAGAAATCCGAA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16586 60 +     22201 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CC-T-C-AAGCAGAAATCCGAA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414807 60 -  22158432 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CC-T-C-AAGCAGAAATCCGAA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  26984 60 -     54323 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CC-T-C-AAGCAGAAATCCGAA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199125 59 +   9404916 TAACGACTACAAA-G------CAA-AATTTATTAGCAGCCA-G-TGCCT-T-TC-C-T-AAACAGTAATCCAAA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639102 58 + 196305487 TAGTGAACTC--A-G------TGA-TGTTTGTTGGTACTCA-G-TGTGTTT-CT-C-C-AAGTGCTTATCCAAA
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_1296080                             1705 58 -      9413 TAGTGAACTC--A-G------TGA-TGTTTGTTGGTACTCA-G-TGTGTTT-CT-C-C-AAGTGCTTATCCAAA
i Nycticebus_coucang.k141_1296080                        C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566485 58 - 199412804 TAGTGAACTC--A-G------TGA-TGTTTGTTGGTACTCA-G-TGTCTTT-CT-C-C-AAGTGCTTATCCAAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Ochotona_princeps.JH802162.1                             2557788 56 -   3988456 TAATGAACACAAA-G------CAA-AATTCATTAGCACTTA-G-TGCCTTC-TC-C-T-GAGTACCAATC----
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056080 57 -  11899542 Taatgaacacaaa-a------caa--attcaTTAGTGTA---G-TTTCTCC-CC-C-A-AAGCACAAATCTGAA
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452794 59 +   2017862 TAATGACTACAAA-G------CAA-AATTTATTAGCAGTCA-G-TGCCT-C-TC-C-T-AAGCACTAATCCAAA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437200 60 -    630418 TAATGAGCATGAA-G------CAAAGATTTACTAGTGTTCA-G-TGCCT-C-CC-C-C-AAGTGCTAATCCAAA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15395 60 +    150152 taattagcATGAA-G------CAAAAATTTAACAGCATTCA-G-TGCCT-C-CC-C-C-AAGTGCTAATCCAAA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93651 27 -    140218 GAATGAGCACAAA-G------CAA-AACTTACTAT---------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 248
s Orcinus_orca.KB316932.1                                  8103527 59 +  10937097 Taatgagcatttt-t------tta-aatttactagcGTTCA-G-TGACT-C-TA-C-C-AGGTGCTAATCCaaa
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                553 60 +     11607 TAATGAACATAAG-G------CAA-AATTCATTAGTATGCA-G-TATGTCC-CT-G-A-AAGCTCTAATCCAAA
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104525 60 - 174332312 TAATGAGCACAAA-G------CAA-GATTCATTAGGAGTCA-G-TGCCTTC-CC-C-T-AAGCACTAATCCAAA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40168 59 +    559221 TAACGACTACAAA-G------CAA-AATTTATTAGCAGCCA-G-TGCCT-C-TC-C-T-AAACACTAATCCGAA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41666 46 -     51505 ---------------------TGA-TGTTTGCTGGGGCTCA-G-TGTCTTT-CT-C-C-AAGTGCTTATCCAAA
i Otolemur_crassicaudatus.k141_649260                    I 13 I 1
s Otolemur_garnettii.GL873799.1                             354656 60 +   1103335 TAGTGAattcaga-g------tga-tgtttgctggTGCTCA-G-TGTCTTT-CT-C-C-AAGTGCTTATCCAAA
i Otolemur_garnettii.GL873799.1                          C 0 I 1
s Ovis_aries.CM001607.2                                   26405105 60 -  44047080 taatgAGCATGAA-G------CAAAAATTTACTAGCATTCA-G-TGCCT-C-CC-C-C-AAGTGCTAATCCAAA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5624 60 +     17875 TAATGAGTATGAA-G------CAAAAATTTACTAGCATTCA-G-TGCCT-C-CC-C-C-AAGTGCTAATCCAAA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473700 60 - 189151597 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CA-T-C-AAGCGGAAATCCAAA
i Pan_troglodytes.CM009242.2                             I 6 I 86
s Panthera_onca.PanOnc_flattened_line_3271                   25391 59 -    230217 TAACGACTACAAA-G------CGA-TATTTATTAGCAGTCA-G-TGCCT-C-TC-C-T-GAGCACTAATCCAAA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462717 59 -  18783137 TAACGACTACAAA-G------CGA-TATTTATTAGCAGTCA-G-TGCCT-C-TC-C-T-GAGCACTAATCCAAA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973376 59 +   8748460 TAACGACTACAAA-G------CGA-TATTTATTAGCAGTCA-G-TGCCT-C-TC-C-T-GAGCACTAATCCAAA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616633 60 +   2937107 TAATGAGCATGAA-G------CAAAAATTTACTAACATTCA-G-TGCCT-C-CC-C-C-AAGTGCTAATCCAAA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244508 60 - 183742232 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10793 60 +     21308 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293536 60 -  20919399 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23441 60 -     27687 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     112 60 +     10553 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_1952521                                  5081 60 +      5150 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Papio_ursinus.k141_1952521                             C 0 N 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     15971 59 +     78924 TAACGGCTACAAA-G------CAA-TATTTATTAGCAGTCA-G-TGCCT-C-TC-C-T-AAGCACTAATCCAAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          27983 60 +     31479 TAGTGAACTCAGA-G------TGA-TGTTTGTTGGTACTCG-G-TGTCTTT-CT-C-C-AAGTGCTTATCTGAA
i Perodicticus_ibeanus.k141_1921260                      C 0 I 1
s Perodicticus_potto.k141_1854441                            20351 60 -     24908 TAGTGAACTCAGA-G------TGA-TGTTTGTTGGTACTCG-G-TGTCTTT-CT-C-C-AAGTGCTTATCCGAA
i Perodicticus_potto.k141_1854441                        C 0 I 1
s Perognathus_longimembris.PerPac_flattened_line_89005        2781 60 +      9367 TAATGAGCACAAG-G------TGA-AATTCATTAGTATTAA-G-TGCCTTC-CC-T-A-AAGCACTAATCTGAA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32826 57 -     56120 TAATGAATA-AAA-G------CAA--ATTCATTAGTGCACA-G-TGCCTTC-C--C-T-AGGCACAAAGCTGAA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5053 59 -     63832 TAATGAGCATGAA-G------CAA-AATTTACTAGCATTCA-G-TGACT-C-TA-C-C-AGGTGCTAATCCAAA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3621 60 +     55023 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3159 60 -     89929 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3749 60 +     40849 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255424 60 +  14605196 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4888 59 +     22231 TAATGAGCACGAA-G------CAA-AATTTATTAGTATCCG-G-TGCTT-C-CT-C-C-AAGCAGTAATCCACA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65739 60 +    207309 TAATTGACACAAA-G------CAA-AATTTATTAGTATTCA-A-TGCCTCC-CC-A-C-GAGCGCAAGTCCAAA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6831 60 -     25401 TAATTGACGCAAA-G------CAA-AATTTATTAGTATTCA-A-TGCCTCC-CC-A-C-GAGCGCAAGTCCAAA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32575 60 +     58159 TAATTGACGCAAA-G------CAA-AATTTATTAGTATTCA-A-TGCCTCC-CC-A-C-GAGCGCAAGTCCAAA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32851 60 +     63561 TAATTGACGCAAA-G------CAA-AATTTATTAGTATTCA-A-TGCCTCC-CC-A-C-GAGCGCAAGTCCAAA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32611 60 +     51148 TAATTGACGCAAA-G------CAA-AATTTATTAGTATTCA-A-TGCCTCC-CC-A-C-GAGCGCAAGTCCAAA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557581 60 -   4542175 TAATTGACGCAAA-G------CAA-AATTTATTAGTATTCA-A-TGCCTCC-CC-A-C-GAGCGCAAGTCCAAA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32595 60 +     51125 TAATTGACGCAAA-G------CAA-AATTTATTAGTATTCA-A-TGCCTCC-CC-A-C-GAGCGCAAGTCCAAA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2070 59 +     19503 TAATGAGCATGAA-G------CAA-AATTTACTAGGCTTCA-G-TGACT-C-TA-C-C-AGGTGCTAATCCAAA
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9013 60 +     39866 TAATTGACACAAA-G------GAA-AATTCATTAGTATTCA-G-TGTCTCC-CC-A-C-AAGCGCAAGTCCAAA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4095 60 -      9282 TAATTGACACAAA-G------GAA-AATTCATTAGTATTCA-G-TGTCTCC-CC-A-C-AAGCGCAAGTCCAAA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43499 60 -     87950 TAATTGACACAAA-G------GAA-AATTCATTAGTATTCA-G-TGTCTCC-CC-A-C-AAGCGCAAGTCCAAA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43893 60 -     88961 TAATTGACACAAA-G------GAA-AATTCATTAGTATTCA-G-TGTCTCC-CC-A-C-AAGCGCAAGTCCAAA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8591 60 -     39403 TAATTGACACAAA-G------GAA-AATTCATTAGTATTCA-G-TGTCTCC-CC-A-C-AAGCGCAAGTCCAAA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43542 60 +     87928 TAATTGACACAAA-G------GAA-AATTCATTAGTATTCA-G-TGTCTCC-CC-A-C-AAGCGCAAGTCCAAA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8590 60 -     60166 TAATTGACACAAA-G------GAA-AATTCATTAGTATTCA-G-TGTCTCC-CC-A-C-AAGCGCAAGTCCAAA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15527 60 -     67232 TAATTGACACAAA-G------GAA-AATTCATTAGTATTCA-G-TGTCTCC-CC-A-C-AAGCGCAAGTCCAAA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43443 60 -     90634 TAATTGACACAAA-G------GAA-AATTCATTAGTATTCA-G-TGTCTCC-CC-A-C-AAGCGCAAGTCCAAA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44910 60 +     89403 TAATTGACACAAA-G------GAA-AATTCATTAGTATTCA-G-TGTCTCC-CC-A-C-AAGCGCAAGTCCAAA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178810 60 - 189387572 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CC-T-C-AAGCGGAAATCCAAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193627 60 -   9816681 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CC-T-C-AAGCGGAAATCCAAA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28769 60 +     69807 TAATTGCCACAAA-G------CAA-AATTTACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              45950 60 -     80239 TAATTGCCACAAA-G------CAA-AATTTACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5093 60 +      7663 TAGTGAGCATGAA-C------CCA-AGCTCATCAGCATTCA-G-TGTCTCC-CC-C-C-AGGCTCTAATCCAGA
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983523 60 +   4620579 TAATGAGCACACA-G------TGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AGGCACTAATCCAAA
i Prolemur_simus.MPIZ01000396.1                          C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                    1567033 60 -   2598838 TAATGAGCACAAA-G------TGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 1
s Propithecus_coronatus.k141_209299                           4671 60 -      7103 TAATGAGCACAAA-G------CGA-AATGCATTGGTATTCA-G-TGTCTTT-CC-C-C-AAGCACTAATCCAAA
i Propithecus_coronatus.k141_209299                      C 0 I 1
s Propithecus_diadema.k141_153680                             5268 60 -     11706 TAATGAGCACAAA-G------CGC-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACCAATCCAAA
i Propithecus_diadema.k141_153680                        C 0 I 1
s Propithecus_edwardsi.k141_635656                            9005 60 -     30655 TAATGAGCACAAA-G------CGC-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Propithecus_edwardsi.k141_635656                       C 0 I 1
s Propithecus_perrieri.k141_1496898                          35319 60 +     46564 TAATGAGCACAAA-G------CGC-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACCAATCCAAA
i Propithecus_perrieri.k141_1496898                      C 0 I 1
s Propithecus_tattersalli.k141_1127767                       95598 60 -     98465 TAATGAGCACAAA-G------CGA-AATGCATTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Propithecus_tattersalli.k141_1127767                   C 0 I 1
s Propithecus_verreauxi.k141_1047036                          9237 60 +     35169 TAATGAGCACAAA-G------CGA-AATGCATTGGTATTTA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Propithecus_verreauxi.k141_1047036                     C 0 I 1
s Psammomys_obesus.NESX01095996.1                               33 27 +      1781 taacAAGCACGAA-G------CAA-AATTCATCAA---------------------------------------
i Psammomys_obesus.NESX01095996.1                        n 53 n 53
s Pteronotus_parnellii.KE847780.1                            53067 58 -     66298 TAATGAGCATGAA-G------CAA-AATTTATTAGTAT-CA-G-CGCCT-C-CC-C-C-AAGCAGTACTCCAAA
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5579 46 -     18639 TAATGACTACGAA-G------C--------------AGACA-G-TGCCT-C-TC-C-T-CAGCACTAATCCGAA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841673 59 -  28871421 TAATAAGCACAAA-G------CAA-AATTTATTAGCATTCA-G-TGCCT-C-CC-G-C-AGGCAGTAGTCCAAA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538188 59 -   4952924 TAATAAGCACAAA-G------CAA-AATTTATTAGCATTCA-G-TGCCT-C-CC-G-C-AGGCAGTAGTCCAAA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100033 59 +  38429054 TAACGACTACAAA-G------CGA-TATTTATTAGCAGTCA-G-TGCCT-C-TC-C-T-GAGCACTAATCCAAA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28139 60 +     91421 TAATTGCCACAAA-G------CAA-AATTTACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154623 60 -   7812017 TAATTGCCACAAA-G------CAA-AATTTACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              8996 60 +     72585 TAATTGCCACAAA-G------CAA-AATTTACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54130 44 +     55069 -----------------------AAGATTTACTAGTGTTCA-G-TGCCT-C-CC-C-C-AAGTGCTAATCCAAA
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 13 C 0
s Rattus_norvegicus.chr16                                 37023832 27 -  90668790 TCATGAGCACAAA-A------CAA-AATTCACCAA---------------------------------------
i Rattus_norvegicus.chr16                                C 0 I 21
s Rhinolophus_sinicus.LVEH01000134.1                       2915649 59 +   3329780 CAATGAGCACAAA-G------CAA-AATGTGTTATCATTCA-G-TGCCT-C-CC-C-C-AAGCAGTAATCCAAA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2723 60 +      7119 TAATTGCCACAAA-G------CAA-AATTTACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCCAATCCAAA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123339 60 + 195417433 GAATTGCCACAAA-G------CAA-AATTTACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCCAATCCAAA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237565 60 -   7961872 TAATTGCCACAAA-G------CAA-AATTTACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCCAATCCAAA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76172 59 -    116970 TAATAAGCACAAA-G------CAA-AATTTATTAGTATTCA-G-TGCCT-T-CC-G-C-AAGCAGTAGTCCAAA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               4894 60 +     27962 TAATTATCACAAA-G------AGA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4787 58 +      6077 TAA--ATCACAAA-G------AAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             4878 60 +      5971 TAATTATCACAAA-G------AAA-AATTCATCAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAGATCCAAA
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4799 60 +      5932 TAATTATCACAAA-G------AAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3141 60 -      4390 TAATTATCACAAA-G------AAA-AATTCATCAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392578 60 - 209938924 TAATTATCACAAA-G------AAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4747 60 +      5979 TAATTATCACAAA-G------AAA-AATTCATCAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1316 58 -     22275 TAA--ATCACAAA-G------AAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGCGCAAATCCAAA
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8793 59 +     16473 TAATGAGCATGAA-G------CAA-AATTTACTAGCATTCA-G-TGCCT-C-CT-C-C-AAGTGTTAATCCAAA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109913 60 + 121099817 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGTGCAAATCCAAA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31480 60 -     47369 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGTGCAAATCCAAA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31866 60 -     79414 TAATTAGCACAAA-G------CAA-AATTCATTAGTTTTCA-G-TGCCTCC-CC-A-A-AAGTGCAAATCCAAA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28557 60 -     34454 TAATTAGCACAAA-G------CAA-AATTCATTAGTTTTCA-G-TGCCTCC-CC-A-A-AAGTGCAAATCCAAA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              15958 60 -     22428 TAATTAGCACAAA-G------CAA-AATTCATTAGTTTTCA-G-TGCCTCC-CC-A-A-AAGTGCAAATCCAAA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31112 60 -     47109 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGTGCAAATCCAAA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239164 60 +   5703754 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGTGCAAATCCAAA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8754 60 +     21866 TAATTAGCACAAA-G------CAA-AATTCATTAGTATTCA-G-TGCCTCC-CC-A-A-AAGTGCAAATCCAAA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116805 59 +    313613 TAATGAGCCTGAC-A------AAA-AATTCATCGGTATTCA-G-TTCCTCT--C-A-C-AAGCACTAATACAAA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26465 60 +     27374 TAATTGTCACAAA-G------CAA-AATTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      29977 60 +     58920 TAATTGCCACAAA-G------CAA-AATTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16475 60 -     45317 TAATTGCCACAAA-G------CAA-AATTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24133 60 -     42441 TAATTGCCACAAA-G------CAA-AATTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26811 60 -     29113 TAATTGCCACAAA-G------CAA-AATTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29886 60 -     48123 TAATTGCCACAAA-G------CAA-AATTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865077 66 -   1910179 TAATGAGCATGAA-GCAAAAGCAA-AATTCATTAGCATTCA-G-TGCCTAC-CC-C-T-AAGCACTAATACAAA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672178 58 +  18376816 taatgaacatGAC-T------CAA-AGTTCATTGCCAT-CA-G-AGCCTCC-TC-A-T-AAGCTCTAACTAAA-
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869290 60 +   3870691 TAATGagcataaa-a------caa-aattcattagTATTCA-G-TGCCTTC-CT-T-C-AACCACTAATCCATA
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7668 34 -     97271 TAATGACTATGAA-G------CAA-AATTTATTAGAGGTCA-G-------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 5
s Suricata_suricatta.SurSur_flattened_line_6629             125807 60 +    196729 TAACGACTACAAA-G------CAA-TATTTATTAGCAGTCA-G-TGCCT-C-TC-CTT-AAGCACTAATCCAAA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644859 59 +  69701581 TAATGAGCGTGAA-G------GAA-AATTTGCTAGCATTCA-G-TGCCT-T-CC-C-C-ACGCACTAATCCAAA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392066 60 +   1523678 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCCTCC-CC-T-C-AAGCAGAAATCCAAA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15224 59 +     22964 TAATGAGCATGAA-G------CAA-AATTTATTAGTATTCA-G-TGTCT-C-CT-C-C-ATGCAGTAATCCAAA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3643 59 +      5583 TGATGAGCACGAA-A------CAA-AATGCATTAGTATTCA-G-TGCCTCT-T--C-C-AAACACTAATCCAAA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192547 59 +    199430 TAATGAGCACAAA-G------CAA-GATTTATTAGCATTCA-G-TGCCT-T-CC-C-C-AAGCGCTAATCGAAA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106515 59 -    539355 TAATGAGCACAAA-G------CAA-GATTTATTAGCATTCA-G-TGCCT-T-CC-C-C-AAGTGCTAATCGAAA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1577 60 +      9917 TAATGAACACATG-G------CAA-ATTTTATTAGTCTTCA-G-TGCCTTC-TC-C-C-AAGCACTAATCCAGA
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8375 60 +     20590 TAATGAACACATG-G------CAA-ATTTTATTAGTCTTCA-G-TGCCTTC-CC-C-C-AAGCACTAATCCAGA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354317 60 - 186847797 TAATTGCCACAAA-G------CAA-AATTCACTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25000 53 -     33621 TAATGAACACAAA-G------CAA--ATTCATTAGTGTACA-G-TGCCTTC-C--C-C-AGTTACAAAG-----
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_31955                   20630 58 -     31044 TAACGAGCATGAA-G------CAA-AATTCATTAGCACTCA-G-GGCC-CT-T--C-C-AAACACTACTCCACA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481067 58 -    610378 TAATGAGCAGGAA-G------CAA-AATTTACCGGTGT-CA-G-TGCTT-C-CC-C-C-AAGCAGGACTCCGAA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22010 60 +     26378 TAATTGCCACAAA-G------CAA-AATTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34686 60 -     78344 TAATTGCCACAAA-G------CAA-AAGTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21335 60 +     25722 TAATTGCCACAAA-G------CAA-AATTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29642 60 -     62838 TAATTGCCACAAA-G------CAA-AATTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29686 60 +     46913 TAATTGCCACAAA-G------CAA-AATTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10493 60 -     28527 TAATTGCCACAAA-G------CAA-AATTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31577 60 -     64340 TAATTGCCACAAA-G------CAA-AATTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29615 60 -     63452 TAATTGCCACAAA-G------CAA-AATTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11062 60 +     22490 TAATTGCCACAAA-G------CAA-AATTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4485 60 -      6147 TAATTGCCACAAA-G------CAA-AAGTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11398 60 -     13050 TAATTGCCACAAA-G------CAA-AAGTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256628 60 -   6242583 TAATTGCCACAAA-G------CAA-AAGTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2656 60 +     19340 TAATTGCCACAAA-G------CAA-AATTTCCTAGTATTCA-G-TGCTTAT-CC-C-C-AAGTGCAAATCCAAA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174402 59 -    200418 TAATGAGCATGAA-G------CAA-AATTTACTTGCATCCA-G-TACCT-C-TC-T-C-AAGCGCTAATCCAAA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482464 60 -  10818551 GAATGAGCAGGGA-C------CAA-Aattcattagtattca-a-tgcctCC-CC-T-C-AAGCTCTGATCCAAA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835304 60 -   4065304 TAATGAGCACAAA-G------CAA-AAATCATTAGTATTCA-G-TGCCTTC-CC-C-A-AAGCACGAATCCAAA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9324 60 -     70247 TAATGAGCACAAA-G------CAA-AAACCATTAGTATTCA-G-TGCCTTC-CC-C-A-AAGCACTAATCCAAA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366640 59 -  33153633 TAATGAGCATGAA-G------CAA-AATTTACTAGCGTTCA-G-TGACT-C-TA-C-C-AGGTGCTAATCCAAA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4518 59 -     21056 TAATGAGCATGAA-G------CAA-AATTCATTAGTATTCA-T-CAGTATT-CC-A-T-GA-AACTAATCCAGA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                182969 42 +   5085361 TAATGACTACAAA-G------CAA-AATTTATTAGCAGTCA-G-TGCCT-C-TC--------------------
i Ursus_maritimus.KK499267.1                             C 0 I 16
s Varecia_rubra.k141_787544                                  26179 60 -     30710 TAATGAGCACAAA-G------CAA-AATGCACTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Varecia_rubra.k141_787544                              C 0 I 1
s Varecia_variegata.k141_289850                              25086 60 -    147434 TAATGAGCACAAA-G------CAA-AATGCACTGGTATTCA-G-TATCTTC-CC-C-C-AAGCACTAATCCAAA
i Varecia_variegata.k141_289850                          C 0 I 1
s Vicugna_pacos.KN270157.1                                   77227 60 +   5488506 TAATGAGCACGAA-G------CAA-AATTTATTAGCATTCATG-TGCCT-C-CC-C-C-AAGCATTAATCCAAA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105891 59 -    112863 TAACGATTACAAA-G------CAA-AATTTATTAGCAGCCA-G-TGCCT-C-TC-C-T-AAACAGTAATCCAAA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175046 60 -    224448 TAATGAGCGTAAG-A------CAA-AATTCATTAGTATTCA-G-TGCCTTC-CC-C-T-AATCACTAATCCAAA
i Xerus_inauris.XerIna_scaffold_2302                     I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30002 59 -     86975 TAATGACTACAAA-G------CAA-AATTTATTAGCAGTCA-G-TGCCT-C-TC-C-T-AAGCACTAATCCAAA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                       925 30 -      1899 TAATGTACTCAAA-A------CAA-AACTC---AGTGCTCC---------------------------------
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 I 24
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1924 59 +      2126 TAATGAGCATGAA-G------CAA-AATTTACTAGCATTCA-G-TGACT-C-TA-C-C-AGGTGCTAATCCAAA
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922  6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549  6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339  6 -     41509 I
e Noctilio_leporinus.NocLep_scaffold_7894                   128981  0 -    149072 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6416 21 +     36723 GC-ACGT--TT--T-C-CC-A-TT-AAGGA--G
s Acinonyx_jubatus.LLWD01001279.1                           813834 22 +   1699592 GC-ACGT--TT--T-C-CC-A-TA-ATGAA-AA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Acomys_cahirinus.AcoCah_scaffold_21377                     26192 11 +     63021 TC-ATGGTGTC--C-------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 26 I 10
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416291 22 +  29979442 GC-ATGT--TT--T-C-CC-A-TA-atgaa-aa
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 16 I 2
s Ailurus_fulgens.LNAC01001112.1                            216631 22 +    347723 GC-ATGT--TT--T-C-CT-A-TA-ATGAA-TA
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 2
s Allactaga_bullata.AllBul_scaffold_20030                    19483 22 -     61208 GT-GTAC--AC--T-C-CC-A-TT-GTGAA-AG
i Allactaga_bullata.AllBul_scaffold_20030                I 24 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49061 21 +     53615 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1092 21 +     13857 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17643 21 -     21945 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19328 21 +     32033 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73160 22 -     84148 GC-ATGG--TT--T-A-CC-A-TT-ATGAA-AG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45399 22 -     78289 GC-ATGG--TT--T-A-CC-A-TT-ATGAA-AG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44838 22 +     55831 GC-ATGG--TT--T-A-CC-A-TT-ATGAA-AG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43288 22 -     64179 GC-ATGG--TT--T-A-CC-A-TT-ATGAA-AG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            395 22 -      3959 GC-ATGG--TT--T-A-CC-A-TT-ATGAA-AG
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             41913 22 +     45454 GC-ATGG--TT--T-A-CC-A-TT-ATGAA-AG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47562 22 +     70886 GC-ATGG--TT--T-A-CC-A-TT-ATGAA-AG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9735 22 +     30854 GC-ATGG--TT--T-A-CC-A-TT-ATGAA-AG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33869 22 +     42133 GC-ATGG--TT--T-A-CC-A-TT-ATGAA-AG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586298 23 +   2318259 GC-Aggt--tt--t-c-cc-atta-aaaaa-ag
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      178089 23 -    412891 GC-ATGT--T---T-CCCC-A-TA-AAGAAGGT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 7
s Antilocapra_americana.AntAmePen_scaffold_21030             51405 22 -     68529 GC-AGGT--TT--T-C-CC-A-TA-ATAAA-AG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 2
s Aotus_azarae.k141_887050                                    2127 22 +     17741 GC-ATGA--TT--T-A-CC-A-TT-ATTAA-AG
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2752 22 -     15923 GT-ATGA--TT--T-A-CC-A-TT-ATGAA-AG
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673034 22 +   5030052 GC-ATGA--TT--T-A-CC-A-TT-ATGAA-AG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3028 22 -     16391 GC-ATGA--TT--T-A-CC-A-TT-ATGAA-AG
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2587 22 -     17186 GC-ATGA--TT--T-A-CC-A-TT-ATGAA-AG
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17110 20 -     32367 GC-ATAT--TT--T-T-CC-A-TT-ATGAT---
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 5
s Arctocebus_calabarensis.k141_1364444                       21194 11 -     45910 ------------------C-T-TC-ATCAAG-G
i Arctocebus_calabarensis.k141_1364444                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6356 23 -     15198 GC-ATGT--T---T-CCCC-A-TA-AAGAAGGT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 7
s Ateles_geoffroyi_b.tarseq_1536                               275625 22 +  21539123 GC-ATGA--TT--T-A-CC-A-TT-ATGAA-AG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11793 22 +     48076 GC-ATGA--TT--T-A-CC-A-TT-ATGAA-AG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   6928 22 -     28759 GC-ATGA--TT--T-A-CC-A-TT-ATGAA-AG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34482 22 +     44353 GC-ATGA--TT--T-A-CC-A-TT-ATGAA-AG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49853 22 -     71267 GC-ATGA--TT--T-A-CC-A-TT-ATGAA-AG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                23911 22 -     33135 GC-ATGA--TT--T-A-CC-A-TT-ATGAA-AG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7200 11 +     11645 ------------------C-A-TT-ATGAAG-G
i Avahi_laniger.k141_2756659                             I 1 C 0
s Avahi_peyrierasi.k141_1823318                               7208 11 -     19611 ------------------C-A-TT-ATGAAG-A
i Avahi_peyrierasi.k141_1823318                          I 1 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964435 22 -  23207421 GC-ATGT--TT--T-C-CC-A-TA-ATGGA-AG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 2
s Balaenoptera_bonaerensis.DF411050.1                          935 22 -     25979 GC-ATGT--TT--T-C-CC-A-TA-ATGGA-AG
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_7278                     87306 22 +    124022 GC-AGGT--TT--T-C-CT-ATTA-AA-AA-AG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 2
s Bison_bison.KN261452.1                                     22848 22 +    288883 GC-AGGT--TT--T-C-CA-A-TA-AAAAA-AG
i Bison_bison.KN261452.1                                 C 0 I 2
s Bos_indicus.CM003047.1                                  20357238 22 +  48749331 GC-AGGT--TT--T-C-CA-A-TA-AAAAA-AG
i Bos_indicus.CM003047.1                                 C 0 I 2
s Bos_mutus.JH880303.1                                      755802 22 +   1948126 GC-AGGT--TT--T-C-CA-A-TA-AAAAA-AG
i Bos_mutus.JH880303.1                                   C 0 I 2
s Bos_taurus.CM000203.6                                   27545944 22 -  45695690 GC-AGGT--TT--T-C-CA-A-TA-AAAAA-ag
i Bos_taurus.CM000203.6                                  C 0 I 2
s Bubalus_bubalis.KI419123.1                               1530959 22 -   4408762 GC-AGGT--TT--T-C-CA-A-TA-AAAAA-AG
i Bubalus_bubalis.KI419123.1                             C 0 I 2
s Cacajao_ayresi.k141_96119                                   8801 22 +     28062 GC-ATGT--TT--T-C-GC-G-TC-ATGAA-AG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44095 22 -     91139 AC-ATGT--TT--T-C-GC-G-TC-ATGAA-AG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21621 22 +     95584 GC-ATGT--TT--T-C-GC-G-TC-ATGAA-AG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21534 22 +    119600 GC-ATGT--TT--T-C-GC-G-TC-ATGAA-AG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11105 22 +     18648 GC-ATGA--TT--T-G-CC-A-TT-ATGAA-AG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10623 22 -     13885 GC-ATGA--TT--T-A-CC-A-TT-ATGAA-AG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2710 22 -      8861 GC-ATGA--TT--T-G-CC-A-TT-ATGAA-AG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455102 22 + 189096842 GC-ATGA--TT--T-G-CC-A-TT-ATGAA-AG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2625 22 +      8664 GC-ATGG--TT--T-G-CC-A-TT-ATGAA-AG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7631953 22 +  17673402 GC-ATGT--TT--T-C-CC-A-TA-ATGGA-AG
i Camelus_bactrianus.KN276810.1                          C 0 I 2
s Camelus_dromedarius.KN272107.1                           4666240 22 +   7040546 GC-ATGT--TT--T-C-CC-A-TA-ATGGA-AG
i Camelus_dromedarius.KN272107.1                         C 0 I 2
s Camelus_ferus.KB017975.1                                 1209899 22 +   1652518 GC-ATGT--TT--T-C-CC-A-TA-ATGGA-AG
i Camelus_ferus.KB017975.1                               C 0 I 2
s CanFam4.chr16                                           42506319  1 +  60362399 G--------------------------------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9955  1 -     23171 G--------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223298  1 +   9314153 G--------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616433  1 +  59632846 G--------------------------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108014  1 -  63665305 G--------------------------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410027 23 -  46296322 GC-Aggt--tt--t-c-cc-attt-aaaaa-ag
i Capra_aegagrus.CM003241.1                              C 0 I 2
s Capra_hircus.CM004588.1                                 26592301 23 +  44709034 GC-Aggt--tt--t-c-cc-atta-aaaaa-ag
i Capra_hircus.CM004588.1                                C 0 I 2
s Capromys_pilorides.CapPil_scaffold_762519                    464 22 -      1607 GC-ATGT--TT--T-C-CC-A-TT-ATGGA-AG
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271405 20 +    496798 GC-AAGT--TG--T-C-CC-A-CT-ATTGA---
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_107871               1214 23 +      9923 GC-ACAT--T---T-CCCC-A-TA-AAGAAGGT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 7
s Castor_canadensis.CasCan_scaffold_39952                    28605 22 -     39886 GT-ATGT--TC--T-C-CC-A-TT-ATGAA-AG
i Castor_canadensis.CasCan_scaffold_39952                I 16 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80499 22 -    217609 AC-ATGT--TT--T-C-CC-G-TA-ATGGA-AG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 2
s Cavia_aperea.AVPZ01000300.1                              4997334 22 +  23392119 GC-CTGT--TT--T-C-CT-G-TT-ATGAG-TG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000775 22 +  23407841 GC-CTGT--TT--T-C-CT-G-TT-ATGAG-TG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63856 22 -     66877 GC-CTGT--TT--T-C-CT-G-TT-ATGAG-TG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6022 22 -     12580 GC-ATGA--TT--T-G-CC-A-TT-ATGAA-AG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44080 22 +     53515 GC-ATGA--TT--T-G-CC-A-TC-ATGAA-AG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373850 22 -  26074798 GC-ACGA--TT--T-A-CC-G-TT-ATGAA-AG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8904 22 -     34880 GC-ACGA--TT--T-A-CC-G-TT-ATGAA-AG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68000 22 -     89041 GC-ACGA--TT--T-A-CC-G-TT-ATGAA-AG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3365 22 -      5494 GC-AAGT--TG--T-C-CC-A-CT-ATTGA-AG
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493121 22 -  27778364 GC-ATGT--TT--T-C-TC-C-TA-ATGAA-AG
i Ceratotherium_simum.JH767749.1                         C 0 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19954 22 +     27315 GC-ATGT--TT--T-C-TC-C-TA-ATGAA-AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 2
s Cercocebus_atys.KQ010504.1                                142209 21 -   4669795 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       45953 21 +     47900 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1381 21 -     14410 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45765 21 -    148725 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        27975 21 -     40656 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           7939 21 +     20796 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13057 21 -     17524 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28780 21 -     34525 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12560 21 -     25376 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365147 21 -  39242232 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270874 21 +  21565898 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33242 21 -     45857 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28143 21 -     32606 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4305 21 +      8499 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26701 21 +     70610 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23662 21 +     36323 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13609 21 -     19938 GC-ATGT--T---T-C-CT-G-CT-AGGAC-AG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 2
s Cheirogaleus_major.k141_666340                             31573 11 -     33796 ------------------C-A-TT-ATGAAG-G
i Cheirogaleus_major.k141_666340                         I 1 C 0
s Cheirogaleus_medius.k141_759766                             6087 11 -     15404 ------------------C-A-TT-ATGAAG-G
i Cheirogaleus_medius.k141_759766                        I 1 C 0
s Cheracebus_lucifer.k141_2312002                             9908 22 -     32913 GC-ATGT--TT--T-C-CG-A-TT-ATGAA-AG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20321 22 -     40346 GC-ATGT--TT--T-C-CG-A-TT-ATGAA-AG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20576 22 +    216457 GC-ATGT--TT--T-C-CG-A-TT-ATGAA-AG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20365 22 +     39636 GC-ATGT--TT--T-C-CG-A-TT-ATGAA-AG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239676 22 -   2543920 GC-AAGT--TT--T-C-CC-A-TT-ATAAA-AG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4956 22 +      5346 GC-ACGA--TT--T-A-CC-A-TT-ATGAA-AG
i Chiropotes_albinasus.k141_1946120                      C 0 I 4
s Chiropotes_israelita.k141_313004                           43432 22 -    112038 GC-ATGC--TT--T-C-GT-G-TT-ATGAA-AG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           8983 22 +     34062 GC-ATGC--TT--T-C-GT-G-TT-ATGAA-AG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344563 21 +  18827391 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11105 21 -     44032 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305888 21 - 135778131 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15742 10 +     15858 GC-ATGT--T---T-C-G---------------
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 I 11
s Choloepus_hoffmanni.KN194906.1                            607317 10 -    839153 GC-ATGT--T---T-C-G---------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 11
s Chrysochloris_asiatica.ChrAsi_scaffold_2783671               250 22 +       421 GC-ATGC--TT--T-C-CT-T-TT-TTGAAG-G
i Chrysochloris_asiatica.ChrAsi_scaffold_2783671         N 0 I 2
s Colobus_angolensis.KN981557.1                             410293 21 -   2368649 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380174 21 - 200372422 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3731 21 -     84244 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808172 21 +  53390261 GC-ATGT--TTTTT-T-TG-A-TT-ATGA----
i Condylura_cristata.JH655891.1                          C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3702 22 -      8242 GC-ATGT--TT--T-C-CC-A-TA-ATGAAG-G
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_14425                 45145 10 -     83289 --------------------A-AT-ACAAA-AG
i Cricetomys_gambianus.CriGam_scaffold_14425             I 102 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10765 22 +     12657 GA-TGAT--TT--T-T-CT-A-TT-ATGAAG-T
i Crocidura_indochinensis.CroInd_scaffold_77846          I 20 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5283 22 +     87169 GC-ACGT--TT--T-C-CC-A-TA-ATGAA-AA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Ctenodactylus_gundi.CteGun_scaffold_65                    646334 22 -   1526836 AC-ATAT--TT--T-C-TC-C-TT-GTGAG-AG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19531 21 +     50838 -C-ATGT--TT--T-C-CC-A-TT-ATGGA-AG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5257 22 +     36344 GC-ATTT--CT--T-C-CC-A-TT-ATGAA-AG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29038 22 +     75252 GC-ATGT--TT--G-C-CC-A-TT-ATGAA-AG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2110960 21 -   2246927 GC-ATGT--T---T-C-CT-G-CT-GTGAC-AG
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Daubentonia_madagascariensis.ctg71                        293509 11 +  12879189 ------------------C-A-TT-ATGGAG-G
i Daubentonia_madagascariensis.ctg71                     I 1 C 0
s Delphinapterus_leucas.KZ290073.1                        18632843 22 -  35494412 GC-ATGT--TT--T-C-CC-A-TA-ATGGA-Ag
i Delphinapterus_leucas.KZ290073.1                       C 0 I 2
s Desmodus_rotundus.KZ672289.1                            11866226 22 -  20541912 GC-ATGT--T---T-C-CC-G-TA-AGGAAGGT
i Desmodus_rotundus.KZ672289.1                           C 0 I 7
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665405 22 -   1390856 GC-ACAT--TT--T-C-TC-C-TA-ATGAA-AG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 2
s Diceros_bicornis.DicBicMic_scaffold_5955                  140194 22 -    198055 GC-ATGT--TT--T-C-TC-C-TA-ATGAA-AG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 2
s Dinomys_branickii.DinBra_scaffold_10381                    99757 20 -    115145 GC-AAGT---T--T-C-CC-A-TT-A-GAA-AG
i Dinomys_branickii.DinBra_scaffold_10381                I 16 C 0
s Dipodomys_ordii.KN672350.1                              18951499 22 -  37912305 GT-ATGA--TC--T-C-CC-A-TT-ATGAA-AA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6430 22 -     10735 GT-ATGA--TC--T-C-CC-A-TT-ATGAA-AA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856453 13 - 111700974 ---------------C-TC-A-TT-ACGAA-AA
i Echinops_telfairi.JH980293.1                           C 0 I 2
s Eidolon_helvum.AWHC01266696.1                               7192 22 +     19438 GT-GTGT--TT--T-C-CC-A-TA-ATGAAG-G
i Eidolon_helvum.AWHC01266696.1                          C 0 I 2
s Elaphurus_davidianus.JRFZ01104969.1                       240664 22 -    607251 GC-AGGT--TT--T-C-CT-A-TA-ATAAA-AG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 2
s Elephantulus_edwardii.JH947257.1                         1226676 22 +  10337057 GC-ATAT--TT--T-C-CT-A-TT-AAGAA-AG
i Elephantulus_edwardii.JH947257.1                       C 0 I 2
s Enhydra_lutris.KZ291758.1                               24917030 22 +  41312741 GC-ATGT--TT--T-C-CT-A-TA-ATgaa-aa
i Enhydra_lutris.KZ291758.1                              C 0 I 2
s Eptesicus_fuscus.JH977646.1                             12579810 22 +  14770903 GC-ATGT--TT--T-C-CC-A-TA-ATGAAG-G
i Eptesicus_fuscus.JH977646.1                            C 0 I 2
s Equus_asinus.JREZ01000139.1                              3042326 22 -   4378816 GC-ATGT--TT--T-C-CC-A-TA-AGGCA-AG
i Equus_asinus.JREZ01000139.1                            C 0 I 2
s Equus_caballus.CM000403.2                               21376264 22 +  39960074 GC-ACGT--TT--T-C-CC-A-TA-AGGCA-AG
i Equus_caballus.CM000403.2                              C 0 I 2
s Equus_przewalskii.KK951119.1                              412246 22 -    498745 GC-ACGT--TT--T-C-CC-A-TA-AGGCA-AG
i Equus_przewalskii.KK951119.1                           C 0 I 2
s Erinaceus_europaeus.JH835339.1                           3666956 22 +   7059049 GA-ATAT--TT--T-C-CT-G-TC-ATGAA-AC
i Erinaceus_europaeus.JH835339.1                         C 0 I 1
s Erythrocebus_patas.Contig38                               264099 21 +  21539334 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72049 22 -    133382 GC-ATGT--TT--T-C-CC-A-TA-ATGAA-AG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_257977              636 22 -      1072 GC-ATGT--TT--T-C-CC-A-TA-ATGAA-AG
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 I 2
s Eulemur_albifrons.k141_51491                               15714 11 -     24895 ------------------C-A-TT-ATGAAG-G
i Eulemur_albifrons.k141_51491                           I 1 C 0
s Eulemur_collaris.k141_601111                               43424 11 -     70999 ------------------C-A-TT-ATGAAG-G
i Eulemur_collaris.k141_601111                           I 1 C 0
s Eulemur_coronatus.k141_384460                              87394 11 +    112731 ------------------C-A-TT-ATGAAG-G
i Eulemur_coronatus.k141_384460                          I 1 C 0
s Eulemur_flavifrons.k141_433119                             43956 11 +     68309 ------------------C-A-TT-ATGAAG-G
i Eulemur_flavifrons.k141_433119                         I 1 C 0
s Eulemur_fulvus.k141_636316                                 54281 11 -     65740 ------------------C-A-TT-ATGAAG-G
i Eulemur_fulvus.k141_636316                             I 1 C 0
s Eulemur_macaco.k141_1562045                                24913 11 -     75513 ------------------C-A-TT-ATGAAG-G
i Eulemur_macaco.k141_1562045                            I 1 C 0
s Eulemur_mongoz.k141_232305                                 49108 11 -     97555 ------------------C-A-TT-ATGAAG-G
i Eulemur_mongoz.k141_232305                             I 1 C 0
s Eulemur_rubriventer.k141_1423786                            5832 11 +     30972 ------------------C-A-TT-ATGAAG-G
i Eulemur_rubriventer.k141_1423786                       I 1 C 0
s Eulemur_rufus.k141_514691                                  43552 11 -     52037 ------------------C-A-TT-ATGAAG-G
i Eulemur_rufus.k141_514691                              I 1 C 0
s Eulemur_sanfordi.k141_1122526                              59955 11 -    111500 ------------------C-A-TT-ATGAAG-G
i Eulemur_sanfordi.k141_1122526                          I 1 C 0
s Felis_catus.CM001381.2                                 186247744 22 - 206538554 GC-ACGT--TT--T-C-CC-A-TA-ATGAA-AA
i Felis_catus.CM001381.2                                 C 0 I 2
s Felis_catus_fca126.CM031415.1                          185117530 22 - 205367284 GC-ACGT--TT--T-C-CC-A-TA-ATGAA-AA
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_31944                 28627 22 -     30238 GC-ACAT--TT--T-C-CC-A-TA-ATGAA-AA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 2
s Fukomys_damarensis.KN121974.1                            2922909 22 -   3816255 GC-ATGC--TT--T-C-CC-A-CT-ATGAA-AG
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126566 11 -    137831 ------------------C-T-TC-ATCAAG-G
i Galago_moholi.ctg3793                                  I 1 C 0
s Galago_senegalensis.k141_991736                            10111 11 +     22493 ------------------C-T-TC-ATCAAG-G
i Galago_senegalensis.k141_991736                        I 1 C 0
s Galagoides_demidoff.k141_561628                            22181 11 -     32986 ------------------C-T-TC-ATCAAG-G
i Galagoides_demidoff.k141_561628                        I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2083 22 -     28519 GC-ATGT--TT--T-C-CC-A-TT-ATGAA-AG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92371 22 -     95226 GC-AGAT--TT--T-C-CC-A-TA-ATAAA-AG
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 2
s Glis_glis.GliGli_scaffold_163929                            2229 22 -      6791 GC-ATGT--TT--T-C-TC-A-TT-ACAAGG-G
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6716 21 -      8343 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255730 21 - 186649187 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Gorilla_gorilla.LT578341.1                             C 0 I 9
s Graphiurus_murinus.GraMur_scaffold_10447                    3301 22 -     78134 GC-ATGT--TT--T-C-CT-A-TT-ACGGG-AG
i Graphiurus_murinus.GraMur_scaffold_10447               I 10 C 0
s Hapalemur_alaotrensis.k141_330369                          15643  7 -     40692 ------------------C-A-T-----AAG-G
i Hapalemur_alaotrensis.k141_330369                      I 1 C 0
s Hapalemur_gilberti.k141_646465                             37045  7 +     49394 ------------------C-A-C-----AAG-G
i Hapalemur_gilberti.k141_646465                         I 1 C 0
s Hapalemur_griseus.k141_763500                              61913  7 -     66874 ------------------C-A-T-----AAG-G
i Hapalemur_griseus.k141_763500                          I 1 C 0
s Hapalemur_meridionalis.k141_258450                         10787  7 -     42923 ------------------C-A-T-----AAG-G
i Hapalemur_meridionalis.k141_258450                     I 1 C 0
s Hapalemur_occidentalis.k141_578367                         17786  7 -     53142 ------------------C-A-C-----AAG-G
i Hapalemur_occidentalis.k141_578367                     I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31717 22 -    327341 GC-ACGT--TT--T-C-CC-A-TA-ATGAA-AA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10045 23 +     48891 GC-AGGT--TT--T-C-CC-ATTA-AAAAA-AG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 2
s Heterocephalus_glaber.JH602082.1                         1933325 22 -  22651954 GC-ATGT--TT--T-C-CT-G-TT-ACAAA-AG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1162 22 +      8654 AC-ATGT--TT--T-T-CC-A-TT-AGGAA-AG
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8551 22 -     36432 GC-ATGT--TT--T-C-CC-A-TA-ATGGA-AA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                      1552535 19 -   1711038 ----CGT--TT--T-C-CC-A-TA-ATGAAG-G
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_164997               1974 19 -      2730 ----TGT--TT--T-C-CC-A-TA-AAGAAG-G
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 2
s Hoolock_leuconedys.ctg274                                    143740 21 -    630532 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71111 22 +     83186 GC-ACGT--TT--T-C-CC-A-TA-ATGAAG-A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 2
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72735 22 +    143317 GC-ATGT--TT--T-C-CC-A-TT-ATGAA-AG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6774 21 +     12352 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              13958 21 +     55766 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053558 21 + 191637585 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802436 21 +  11177569 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8069 22 -    135385 GC-TCAT--TT--T-C-AC-A-TT-ATGAC-AG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387772 21 +   7955117 GC-atgt--tt--t-c--c-a-tt-ataaa-at
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3343 11 +     11955 ------------------C-A-TT-ATGAAG-G
i Indri_indri.k141_2415743                               I 1 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10944 22 -     16823 GC-ATGT--TT--T-C-CC-A-TA-ATGGA-AG
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 2
s Jaculus_jaculus.JH725527.1                               1241012 22 +   9596543 GT-ACGT--TC--T-C-CC-A-TT-GTGAA-AG
i Jaculus_jaculus.JH725527.1                             I 24 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72784 22 -     97402 GC-ATGT--TT--T-C-CC-A-TA-ATGGA-AG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 2
s Lagothrix_lagothricha.k141_246028                          44176 22 +    110728 GC-ATGA--CT--T-A-CC-G-TT-ATGAA-AG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64141 22 -     65777 GC-ATGT--TT--T-C-CC-G-TA-ATGAAG-G
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 2
s Lemur_catta.scaffold_24                                 14760436 11 +  30322482 ------------------C-A-TT-ATGAAG-G
i Lemur_catta.scaffold_24                                I 1 C 0
s Leontocebus_fuscicollis.k141_2994775                        5078 23 -     13097 GC-ACGA--TT--T-A-CC-A-TTTATGAA-AG
i Leontocebus_fuscicollis.k141_2994775                   C 0 I 4
s Leontocebus_illigeri.k141_2951200                           4832 23 +      5940 GC-ACGA--TT--T-A-CC-A-TTTATGAA-AG
i Leontocebus_illigeri.k141_2951200                      C 0 I 4
s Leontocebus_nigricollis.k141_3905062                        4655 23 -      5717 GC-ACGA--TT--T-A-CC-A-TTTATGAA-AG
i Leontocebus_nigricollis.k141_3905062                   C 0 I 4
s Leontopithecus_chrysomelas.k141_1327670                    11046 22 -     11567 GC-ACGA--TT--T-A-CC-A-TT-ATAAA-AG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12427 22 -     12945 GC-ACGA--TT--T-A-CC-A-TT-ATAAA-AG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                          9948 11 +     29618 ------------------C-A-TT-ATGAAG-G
i Lepilemur_ankaranensis.k141_567626                     I 1 C 0
s Lepilemur_dorsalis.k141_387009                              9944 11 +     31569 ------------------C-A-TT-ATGAAG-G
i Lepilemur_dorsalis.k141_387009                         I 1 C 0
s Lepilemur_ruficaudatus.k141_330196                          9954 11 +     24756 ------------------C-A-TT-ATGAAG-G
i Lepilemur_ruficaudatus.k141_330196                     I 1 C 0
s Lepilemur_septentrionalis.k141_360456                       9954 11 +     16388 ------------------C-A-TT-ATGAAG-G
i Lepilemur_septentrionalis.k141_360456                  I 1 C 0
s Leptonychotes_weddellii.KB714746.1                        814423 22 -   3914936 AC-ATGT--TT--T-C-CC-A-TA-Atgaa-aa
i Leptonychotes_weddellii.KB714746.1                     C 0 I 2
s Lepus_americanus.LepAme_scaffold_56121                     18789 20 +     24238 GC-ATGG--CT--T-C-CC-G-TT-ATGAA---
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 1
s Lipotes_vexillifer.KE559953.1                             342129 22 +    662738 GC-ATGT--TT--T-C-CC-A-TA-ATGGA-Ag
i Lipotes_vexillifer.KE559953.1                          C 0 I 2
s Lophocebus_aterrimus.ctg367                               335094 21 -   1826925 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12264 11 +     19643 ------------------C-T-TC-ATCAAG-G
i Loris_lydekkerianus.k141_2031736                       I 1 C 0
s Loris_tardigradus.ctg83                                  5045934 11 -   6120653 ------------------C-T-TC-ATCAAG-G
i Loris_tardigradus.ctg83                                I 1 C 0
s Loxodonta_africana.GL010049.1                           39085830 21 +  43346337 GC-ATGT--TT--T-T-CC-A-TT-AG-AA-AG
i Loxodonta_africana.GL010049.1                          C 0 I 2
s Lycaon_pictus.CM007581.1                                41615588  1 +  59628241 G--------------------------------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46483 21 -     61512 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374145 21 -  60120075 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26413 21 +     30207 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1251 21 -      5035 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26366 21 +     30527 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37542 21 -     50087 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47286 21 +     51645 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416489 21 - 187317192 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400719 21 +  25927173 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49891 21 -     62418 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2422 21 +     14901 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46363 21 +     59329 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272271 21 +    668171 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   909 21 -      5049 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4069 21 +     17132 GC-ATGT--TT--T-C-CC-G-TT-AAGGA--G
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224160 22 -    270270 GT-GTGT--TT--T-C-TC-A-TA-ATGAAG-G
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 2
s Mandrillus_leucophaeus.scaffold280                        323559 21 +  24302211 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358390 21 -    752769 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674475 22 -    737560 TC-ATGT--TT--C-C-CC-A-TG-GTGGAG-A
i Manis_javanica.JSZB01003497.1                          C 0 I 2
s Manis_pentadactyla.KN006162.1                             221775 22 +    317179 TC-ATGT--TT--C-C-CT-A-TA-GTGGAG-A
i Manis_pentadactyla.KN006162.1                          C 0 I 2
s Marmota_marmota.CZRN01000018.1                           7501986 21 +  40650429 GC-ATGT--TT--T-C--C-A-TT-ATGAA-AT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151321 22 +    207569 GC-ATGT--GT--T-C-CC-A-TA-ATGAAG-G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_19308             27142 22 -     74585 GC-ATGT--TT--T-C-CC-A-TA-ATGAA-AA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 2
s Meriones_unguiculatus.MerUng_scaffold_7390                 51088 11 -    140813 AC-ATGGTGTT--C-------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 26 I 10
s Mesoplodon_bidens.MesBid_scaffold_6114                     88413 22 +     93471 GC-ATGT--TT--T-C-CC-A-TA-ATGGT-AG
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 2
s Mico_argentatus.k141_582562                                11206 22 +     17804 GC-ATGA--TT--T-G-CC-A-TT-ATGAA-AG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11706 22 -     12984 GC-ATGA--TT--T-G-CC-A-TT-ATGAA-AG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20022 22 -     26561 GC-ATGA--TT--T-G-CC-A-TT-ATGAA-AG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985786 11 +  93316391 ------------------C-A-TT-ATGAAG-G
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47631 22 +    145209 GC-ATGT--TT--T-C-TC-A-TT-ACAGA-AG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_2233                186008 22 +    200668 GC-GTGT--T---C-C-CC-A-TA-AGGAAGGT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 7
s Miniopterus_natalensis.LDJU01000034.1                    6364148 22 -   8254450 GC-ACGT--TT--C-C-CC-A-TA-ATGAAG-G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_23309             43055 22 -     48117 GC-ATGT--TT--C-C-CC-A-TA-ATGAAG-G
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 2
s Miopithecus_ogouensis.k141_1534655                         23594 21 -     27822 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9434 22 +     27589 AC-ATGT--TT--T-C-CC-A-TA-ATGAA-AA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 2
s Mirza_zaza.k141_766280                                     53569 11 -     62432 ------------------C-A-TT-ATGAAG-G
i Mirza_zaza.k141_766280                                 I 1 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360518 22 +    437263 GC-ATGT--TT--T-C-CC-A-TA-ATGGA-AG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180232 23 +    366855 GC-CTGT--TT--T-C-CC-A-TA-GTGGGCGT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 7
s Moschus_moschiferus.MosMos_scaffold_13123                  26491 22 -     82753 GC-AGGT--TT--T-C-CC-A-TA-ATAAA-AG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 2
s Mungos_mungo.MunMun_flattened_line_18455                   19450 22 -     63510 GC-ACGT--TT--T-C-CT-G-TA-ATGAA-AA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 2
s Murina_feae.MurFea_scaffold_17764                          40102 10 +     47283 GC-ATGT--TT--T-C-----------------
i Murina_feae.MurFea_scaffold_17764                      C 0 I 7
s Mus_caroli.LT608237.1                                   35595219  6 + 120012414 GC-ATGG--------------------------
i Mus_caroli.LT608237.1                                  I 21 I 17
s Mus_musculus.chr8                                       41688445  6 + 129401213 GC-ATGG--------------------------
i Mus_musculus.chr8                                      I 21 I 17
s Mus_spretus.CM004101.1                                  39497739  6 + 130317789 GC-ATGG--------------------------
i Mus_spretus.CM004101.1                                 I 21 I 17
s Muscardinus_avellanarius.MusAve_scaffold_12866             84879 22 -     86153 GC-ATGT--TT--T-C-CC-A-TT-AGGAC-AG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 247
s Mustela_putorius.JH418006.1                             14356051 22 +  14710649 GC-ATGT--TC--T-C-CC-G-TA-ATGaa-aa
i Mustela_putorius.JH418006.1                            C 0 I 2
s Myocastor_coypus.MyoCoy_scaffold_15261                     64036 22 +     67721 GC-ATGG--CT--T-T-CC-A-TT-ATGGA-AG
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794370 22 +  10118263 GC-ATGT--TT--T-C-CC-A-TA-ATGAAG-G
i Myotis_brandtii.KE162005.1                             C 0 I 2
s Myotis_davidii.KB100139.1                                4388544 22 +   6019432 GC-ATGT--TT--T-C-CC-G-TA-ATGAAG-G
i Myotis_davidii.KB100139.1                              C 0 I 2
s Myotis_lucifugus.GL429869.1                               384331 22 +   4330536 GC-ATGT--TT--T-C-CC-A-TA-ATGAAG-G
i Myotis_lucifugus.GL429869.1                            C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_66571                         3365 22 +     18357 GC-ATGT--TT--T-C-CC-A-TA-ATGAAG-G
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120711 21 +    130748 GC-ATGT--T---T-C-CT-T-TT-ATGAC-AG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 2
s Nannospalax_galili.KL204047.1                             947658 15 +   3037898 GC-ATGC--TT--T-C-CT-A-TG---------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30250 21 +     34575 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233184 22 -   7148211 GC-ATGT--TT--T-C-CC-A-TA-ATGGA-Ag
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 2
s Nomascus_annamensis.k141_1771965                           54666 21 -    132029 GC-ACGT--TT--T-C-CC-A-TT-AAGGA--G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10761 21 -     16345 GC-ACGT--TT--T-C-CC-A-TT-AAGGA--G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16646 21 +     22201 GC-ACGT--TT--T-C-CC-A-TT-AAGGA--G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414867 21 -  22158432 GC-ACGT--TT--T-C-CC-A-TT-AAGGA--G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27044 21 -     54323 GC-ACGT--TT--T-C-CC-A-TT-AAGGA--G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nycticebus_bengalensis.LG01                             93639161 11 + 196305487 ------------------C-T-TC-ATCAAG-G
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_1296080                             1764 11 -      9413 ------------------C-T-TC-ATCAAG-G
i Nycticebus_coucang.k141_1296080                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566544 11 - 199412804 ------------------C-T-TC-ATCAAG-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Ochotona_princeps.JH802162.1                             2557844  9 -   3988456 ------------------C-A-TT-ATAAA---
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1                199184  1 +   9404916 G--------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11056137 22 -  11899542 GC-ATGG--TT--T-C-CC-A-TT-ATGAA-AG
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452853 22 +   2017862 GC-ATGT--TT--T-C-CC-A-TA-Atgaa-aa
i Odobenus_rosmarus.KB229312.1                           C 0 I 2
s Odocoileus_virginianus.KZ100018.1                         437260 22 -    630418 GC-AGGT--TT--T-C-CC-A-TA-ATAAA-AG
i Odocoileus_virginianus.KZ100018.1                      C 0 I 2
s Okapia_johnstoni.LVCL01S0005463.1                          15455 22 +    150152 GC-AGAT--TT--T-C-CC-A-TA-ATAAA-AG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 2
s Orcinus_orca.KB316932.1                                  8103586 22 +  10937097 gc-atgt--tt--t-c-tt-t-tt-ttgga-ag
i Orcinus_orca.KB316932.1                                C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_201229                613 22 +     11607 AC-ATGT--TT--T-C-CC-A-TT-AGGAAG-G
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 I 2
s Oryctolagus_cuniculus.CM000791.1                       107104585 20 - 174332312 GC-ATGG--CT--T-C-CC-A-TT-ATGAA---
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1
s Otolemur_crassicaudatus.k141_649260                        41713 11 -     51505 ------------------C-T-TC-ATCAAG-G
i Otolemur_crassicaudatus.k141_649260                    I 1 C 0
s Otolemur_garnettii.GL873799.1                             354717 11 +   1103335 ------------------C-T-TC-ATCAAG-G
i Otolemur_garnettii.GL873799.1                          I 1 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40227  1 +    559221 G--------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26405165 23 -  44047080 GC-Aggt--tt--t-c-cc-atta-aaaaa-ag
i Ovis_aries.CM001607.2                                  C 0 I 2
s Ovis_canadensis.OviCan_scaffold_67953                       5684 23 +     17875 GC-AGGT--TT--T-C-CC-ATTT-AAAAA-AG
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 2
s Pan_troglodytes.NBAG03003091.1                             13434 22 -     26668 GC-ATGT--TT--TCC-CC-A-TT-AAGGA--G
i Pan_troglodytes.NBAG03003091.1                         I 63 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25450 22 -    230217 GC-ACGT--TT--T-C-CC-A-TA-ATGAA-AA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                              18462776 22 -  18783137 GC-ACGT--TT--T-C-CC-A-TA-ATGAA-AA
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               3973435 22 +   8748460 GC-ACGT--TT--T-C-CC-A-TA-ATGAA-AA
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1616693 23 +   2937107 GC-Aggt--tt--t-c-cc-atta-aaaaa-ag
i Pantholops_hodgsonii.KE114653.1                        C 0 I 2
s Papio_anubis.CM001495.2                                   244568 21 - 183742232 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10853 21 +     21308 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293596 21 -  20919399 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23501 21 -     27687 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     172 21 +     10553 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   132 21 -     10386 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Papio_ursinus.k141_5784434                             N 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16030 23 +     78924 GC-ACGT--TT--T-C-CCTG-TA-ATGAA-AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 2
s Perodicticus_ibeanus.k141_1921260                          28044 11 +     31479 ------------------C-T-TC-ATCAAG-G
i Perodicticus_ibeanus.k141_1921260                      I 1 C 0
s Perodicticus_potto.k141_1854441                            20412 11 -     24908 ------------------C-T-TC-ATCAAG-G
i Perodicticus_potto.k141_1854441                        I 1 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2841 22 +      9367 GC-GTGA--TC--T-C-TC-A-TT-ATGAAG-G
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32883 22 -     56120 GC-ACTT--TT--T-C-CC-G-TT-ATGAA-AG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5112 22 -     63832 GC-ATGT--TT--T-C-CC-A-TA-ATGGA-AG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 2
s Piliocolobus_badius.k141_2704958                            3681 21 +     55023 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3219 21 -     89929 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3809 21 +     40849 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255484 21 +  14605196 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4947 22 +     22231 GC-ATGT--TT--T-C-CC-A-TA-ATGAAG-G
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 2
s Pithecia_albicans.k141_1239476                             65799 22 +    207309 GC-ATGT--TT--T-C-GT-G-TT-ATGAA-AG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6891 22 -     25401 GC-ATGT--TT--T-C-GT-G-TT-ATGAA-AG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32635 22 +     58159 GC-ATGT--TT--T-C-GT-G-TT-ATGAA-AG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32911 22 +     63561 GC-ATGT--TT--T-C-GT-G-TT-ATGAA-AG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32671 22 +     51148 GC-ATGT--TT--T-C-GT-G-TT-ATGAA-AG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557641 22 -   4542175 GC-ATGT--TT--T-C-GT-G-TT-ATGAA-AG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32655 22 +     51125 GC-ATGT--TT--T-C-GT-G-TT-ATGAA-AG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2129 22 +     19503 AC-ATGT--TT--T-C-CC-A-TA-ATGGA-AG
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 2
s Plecturocebus_bernhardi.k141_2549090                        9073 22 +     39866 GC-ATGT--TT--T-C-CC-A-TT-ATGAA-AG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4155 22 -      9282 GC-ATGT--TT--T-C-CC-A-TT-ATGAA-AG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43559 22 -     87950 GC-ATGT--TT--T-C-CC-A-TT-ATGAA-AG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43953 22 -     88961 GC-ATAT--TT--T-C-CC-A-TT-ATGAA-AG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8651 22 -     39403 GC-ATGT--TT--T-C-CC-A-TT-ATGAA-AG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43602 22 +     87928 GC-ATGT--TT--T-C-CC-A-TT-ATGAA-AG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8650 22 -     60166 GC-ATGT--TT--T-C-CC-A-TT-ATGAA-AG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15587 22 -     67232 GC-ATGT--TT--T-C-CC-A-TT-ATGAA-AG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43503 22 -     90634 GC-ATGT--TT--T-C-CC-A-TT-ATGAA-AG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44970 22 +     89403 GC-ATGT--TT--T-C-CC-A-TT-ATGAA-AG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178870 21 - 189387572 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193687 21 -   9816681 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28829 21 +     69807 AC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46010 21 -     80239 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5153 22 +      7663 AC-ATGT--TT--T-T-CC-A-TT-AGGAA-AG
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 2
s Prolemur_simus.MPIZ01000396.1                            1983584 11 +   4620579 ------------------C-A-TT-ACGAAG-G
i Prolemur_simus.MPIZ01000396.1                          I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567094 11 -   2598838 ------------------C-A-TT-ATGAAG-G
i Propithecus_coquerelli.NW_012148875.1                  I 1 C 0
s Propithecus_coronatus.k141_209299                           4732 11 -      7103 ------------------C-A-TT-ATGAAG-G
i Propithecus_coronatus.k141_209299                      I 1 C 0
s Propithecus_diadema.k141_153680                             5329 11 -     11706 ------------------C-A-TT-ACTAAG-G
i Propithecus_diadema.k141_153680                        I 1 C 0
s Propithecus_edwardsi.k141_635656                            9066 11 -     30655 ------------------C-A-TT-ACGAAG-G
i Propithecus_edwardsi.k141_635656                       I 1 C 0
s Propithecus_perrieri.k141_1496898                          35380 11 +     46564 ------------------C-A-TT-ACTAAG-G
i Propithecus_perrieri.k141_1496898                      I 1 C 0
s Propithecus_tattersalli.k141_1127767                       95659 11 -     98465 ------------------C-A-TT-ATGAAG-G
i Propithecus_tattersalli.k141_1127767                   I 1 C 0
s Propithecus_verreauxi.k141_1047036                          9298 11 +     35169 ------------------C-A-TT-ATGAAG-G
i Propithecus_verreauxi.k141_1047036                     I 1 C 0
s Psammomys_obesus.NESX01036366.1                            38602 11 +     52041 AC-ATGGTGTT--C-------------------
i Psammomys_obesus.NESX01036366.1                        I 53 I 10
s Pteronotus_parnellii.KE847780.1                            53125 23 -     66298 GC-ACGT--TT--T-C-CA-G-TA-GTAAATGT
i Pteronotus_parnellii.KE847780.1                        C 0 I 7
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5625 22 -     18639 GC-ATGT--TT--T-C-CT-A-TA-ATGAA-AA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 2
s Pteropus_alecto.KB030862.1                               5841732 22 -  28871421 GC-GTGT--TT--T-C-CC-A-TA-ATGAAG-G
i Pteropus_alecto.KB030862.1                             C 0 I 2
s Pteropus_vampyrus.KN525825.1                             3538247 22 -   4952924 GC-GTGT--TT--T-C-CC-A-TA-ATGAAG-G
i Pteropus_vampyrus.KN525825.1                           C 0 I 2
s Puma_concolor.QAVW01001104.1                            18100092 22 +  38429054 GC-ACGT--TT--T-C-CC-A-TA-ATGAA-AA
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                             28199 21 +     91421 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154683 21 -   7812017 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9056 21 +     72585 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54174 22 +     55069 GC-AGGT--TT--T-C-CC-A-TA-ATAAA-AG
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 2
s Rattus_norvegicus.chr16                                 37023880 11 -  90668790 GC-ATGGTCTC--C-------------------
i Rattus_norvegicus.chr16                                I 21 I 10
s Rhinolophus_sinicus.LVEH01000134.1                       2915708 22 +   3329780 GT-ACGT--CT--T-C-CC-A-TA-ATGAAG-G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 2
s Rhinopithecus_bieti.k119_778604                             2783 21 +      7119 GC-ATGT--TT--T-C-CC-G-TT-AAGGA--G
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123399 20 + 195417433 GC-ATG---TT--T-C-CC-G-TT-AAGGA--G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237625 21 -   7961872 GC-ATGT--TT--T-C-CC-G-TT-AAGGA--G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76231 22 -    116970 GC-GTGT--TT--T-C-CC-A-TA-ATGAAG-G
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 2
s Saguinus_bicolor.k141_1429097                               4954 22 +     27962 GC-ACGA--TT--T-A-CC-A-TT-ATGAA-AG
i Saguinus_bicolor.k141_1429097                          C 0 I 4
s Saguinus_geoffroyi.k141_3779887                             4845 22 +      6077 GC-ACGA--TT--T-A-CC-A-TT-ATGAA-AG
i Saguinus_geoffroyi.k141_3779887                        C 0 I 4
s Saguinus_imperator.k141_1898058                             4938 22 +      5971 GC-ACGA--TT--T-A-CC-A-TT-ATGAA-AG
i Saguinus_imperator.k141_1898058                        C 0 I 4
s Saguinus_inustus.k141_2469308                               4859 22 +      5932 GC-AGGA--CT--T-A-CC-A-TT-ATGAA-AG
i Saguinus_inustus.k141_2469308                          C 0 I 4
s Saguinus_labiatus.k141_2380921                              3201 22 -      4390 GC-ACGA--CT--T-A-CC-A-TT-ATGAA-AG
i Saguinus_labiatus.k141_2380921                         C 0 I 4
s Saguinus_midas.LG03                                       392638 22 - 209938924 GC-ACGA--TT--T-A-CC-A-TT-ATGAA-AG
i Saguinus_midas.LG03                                    C 0 I 4
s Saguinus_mystax.k141_8077960                                4807 22 +      5979 GC-ACGA--CT--T-A-CC-A-TT-ATGAA-AG
i Saguinus_mystax.k141_8077960                           C 0 I 4
s Saguinus_oedipus.k141_1280589                               1374 22 -     22275 GC-ACGA--TT--T-A-CC-A-TT-ATGAA-AG
i Saguinus_oedipus.k141_1280589                          C 0 I 4
s Saiga_tatarica.SaiTat_scaffold_39512                        8852 23 +     16473 GC-AGGT--TT--T-C-TC-ATTA-AAAAA-AG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 2
s Saimiri_boliviensis.NW_024100920.1                       1109973 23 + 121099817 GCAATGA--TT--T-G-CC-G-TT-ATGaa-ag
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31540 23 -     47369 GCAATGA--TT--T-G-CC-G-TT-ATGAA-AG
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              31926 23 -     79414 GCAATGA--TT--T-G-CC-G-TT-ATGAA-AG
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28617 23 -     34454 GCAATGA--TT--T-G-CC-G-TT-ATGAA-AG
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16018 23 -     22428 GCAATGA--TT--T-G-CC-G-TT-ATGAA-AG
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31172 23 -     47109 GCAATGA--TT--T-G-CC-G-TT-ATGAA-AG
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239224 22 +   5703754 GC-ACGA--TT--T-A-CC-G-TT-ATGAA-AG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8814 22 +     21866 GC-ACGA--TT--T-A-CC-G-TT-ATGAA-AG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116864 22 +    313613 GT-ATGT--TT--T-C-TG-T-TT-ATGAA-AG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 2
s Semnopithecus_entellus.k141_158471                         26525 21 +     27374 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30037 21 +     58920 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16535 21 -     45317 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24193 21 -     42441 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26871 21 -     29113 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          29946 21 -     48123 GC-ATAT--TT--T-C-CC-A-TT-AAGGA--G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865143 22 -   1910179 GC-ATGT--TT--T-C-CC-G-TT-ATGAA-AG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 2
s Sorex_araneus.JH798187.1                                 4672236 18 +  18376816 ----TGA--TT--T-C-CC-A-TT-ATGA-G-T
i Sorex_araneus.JH798187.1                               C 0 I 2
s Spermophilus_dauricus.KZ294078.1                         1869350 21 +   3870691 GC-ATGT--TT--T-C--T-A-TT-ATGAA-AT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7707 22 -     97271 GC-ATGT--TT--T-C-CC-A-TA-ATGAA-AA
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 I 2
s Suricata_suricatta.SurSur_flattened_line_6629             125867 22 +    196729 GC-ACGT--TT--T-C-CC-A-TA-ATGAA-AA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                    6644918 22 +  69701581 AC-ATGT--TT--T-C-CC-A-TA-ATGGA-AG
i Sus_scrofa.CM000828.4                                  C 0 I 2
s Symphalangus_syndactylus.tarseq_199                       392126 21 +   1523678 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15283 22 +     22964 GT-GTGT--TT--C-C-CC-A-TA-ATGAAG-G
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_224794                3702 21 +      5583 GC-ATGT--T---T-C-CT-T-TT-ATGAC-AG
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 2
s Tapirus_indicus.TapInd_scaffold_7432                      192606 22 +    199430 GC-ATGT--TT--T-C-CA-G-TA-ATGAA-AG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    106574 22 -    539355 GC-ATGT--TT--T-C-CA-G-TA-ATGAA-AG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 2
s Tarsius_lariang.k141_1733899                                1637 22 +      9917 GT-GTGT--TT--T-C-CC-A-TT-ATTGA-AG
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8435 22 +     20590 GC-GTGT--TT--T-C-CC-A-TT-ATTGA-AG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354377 21 - 186847797 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25056  6 -     33621 --------------------------TGAA-AG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 3 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20688 21 -     31044 GC-ACGT--G---T-C-GT-G-CT-ATGGC-AG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_294                    481125 22 -    610378 GC-GCGT--T---T-C-CC-T-TA-AAGAAGGC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 7
s Trachypithecus_auratus.k141_1189070                        22070 21 +     26378 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34746 21 -     78344 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21395 21 +     25722 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29702 21 -     62838 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29746 21 +     46913 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10553 21 -     28527 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31637 21 -     64340 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29675 21 -     63452 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11122 21 +     22490 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4545 21 -      6147 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11458 21 -     13050 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256688 21 -   6242583 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2716 21 +     19340 GC-ATGT--TT--T-C-CC-A-TT-AAGGA--G
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174461 22 -    200418 GC-ATGT--TT--T-C-CC-A-TA-ATGGA-AG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 2
s Trichechus_manatus.JH594705.1                            6482524 22 -  10818551 GC-ATGT--TT--T-C-CC-A-TT-ATGAA-AG
i Trichechus_manatus.JH594705.1                          C 0 I 2
s Tupaia_chinensis.KB320699.1                              1835364 22 -   4065304 GT-ATGT--TT--T-C-CC-A-TT-AGGAA-AC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9384 22 -     70247 GT-ATGT--TT--T-C-CC-A-TT-ATGAA-AC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366699 22 -  33153633 GC-ATGT--TT--T-C-CC-A-TA-ATGGA-Ag
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_46687                    4577 22 -     21056 GC-ATGT--TT--T-C-TG-A-TT-ATGAA-AA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 2
s Ursus_maritimus.KK499267.1                                183027 22 +   5085361 GC-ATGT--TT--T-C-CC-A-TA-ATGga-aa
i Ursus_maritimus.KK499267.1                             I 16 I 2
s Varecia_rubra.k141_787544                                  26240 11 -     30710 ------------------C-A-TT-ATGAAG-A
i Varecia_rubra.k141_787544                              I 1 C 0
s Varecia_variegata.k141_289850                              25147 11 -    147434 ------------------C-A-TT-ATGAAG-A
i Varecia_variegata.k141_289850                          I 1 C 0
s Vicugna_pacos.KN270157.1                                   77287 22 +   5488506 GC-ATGT--TT--T-C-TC-A-TA-ATGGA-AG
i Vicugna_pacos.KN270157.1                               C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_12041                105950  1 -    112863 G--------------------------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175106 22 -    224448 GT-GTGT--TT--T-C-TC-A-TT-ATGAA-AA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30061 22 -     86975 GC-ACGT--TT--T-C-CC-A-TA-ATGAA-AA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_286923                       979 23 -      1899 GT-GTGC--TC--T-C-TT-G-TT-GTGAAAAG
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 24 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            1983 22 +      2126 GC-ATGT--TT--T-C-CC-A-TA-ATGGT-AG
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 I 2
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922  6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549  6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339  6 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    93678 248 -    140218 I
e Noctilio_leporinus.NocLep_scaffold_7894                   128981  0 -    149072 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Microtus_ochrogaster.CM001695.1                         15963323 308 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17430128 58 +  29670104 I
e Ellobius_talpinus.LOJH01026522.1                           13853 246 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          31882 249 +    110024 I
e Cricetulus_griseus.LT883664.1                          213115745 58 - 224834208 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6437  7 +     36723 AC----T------C-------CT-T
s Acinonyx_jubatus.LLWD01001279.1                           813858 11 +   1699592 GT----T------C-TTCTCCC---
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26213  5 +     63021 A-----C------A-------TC--
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 10 I 22
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416315 11 +  29979442 gt----t------t-cttttcc---
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 2 C 0
s Ailurus_fulgens.LNAC01001112.1                            216655 11 +    347723 GT----T------CCTTTTC-C---
i Ailurus_fulgens.LNAC01001112.1                         I 2 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19505  7 -     61208 AC----T------T-------CT-T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 33
s Allenopithecus_nigroviridis.k141_3755588                   49082  7 +     53615 AC----T------C-------CT-T
i Allenopithecus_nigroviridis.k141_3755588               C 0 I 3
s Allochrocebus_lhoesti.k141_3412094                          1113  7 +     13857 AC----T------C-------CT-T
i Allochrocebus_lhoesti.k141_3412094                     C 0 I 3
s Allochrocebus_preussi.k141_1993939                         17664  7 -     21945 AC----T------C-------CT-T
i Allochrocebus_preussi.k141_1993939                     C 0 I 3
s Allochrocebus_solatus.k141_3554717                         19349  7 +     32033 AC----T------C-------CT-T
i Allochrocebus_solatus.k141_3554717                     C 0 I 3
s Alouatta_belzebul.k141_1011583                             73182  7 -     84148 AG----T------C-------CT-T
i Alouatta_belzebul.k141_1011583                         C 0 I 3
s Alouatta_caraya.k141_1109140                               45421  7 -     78289 AG----T------C-------CT-T
i Alouatta_caraya.k141_1109140                           C 0 I 3
s Alouatta_discolor.k141_2561099                             44860  7 +     55831 AG----T------C-------CT-T
i Alouatta_discolor.k141_2561099                         C 0 I 3
s Alouatta_juara.k141_1687208                                43310  7 -     64179 AG----T------C-------CT-T
i Alouatta_juara.k141_1687208                            C 0 I 3
s Alouatta_macconnelli.k141_1277969                            417  7 -      3959 AG----T------C-------CT-T
i Alouatta_macconnelli.k141_1277969                      C 0 I 3
s Alouatta_nigerrima.k141_376068                             41935  7 +     45454 AG----T------C-------CT-T
i Alouatta_nigerrima.k141_376068                         C 0 I 3
s Alouatta_palliata.k141_638677                              47584  7 +     70886 AG----T------C-------CT-T
i Alouatta_palliata.k141_638677                          C 0 I 3
s Alouatta_puruensis.k141_251022                              9757  7 +     30854 AG----T------C-------CT-T
i Alouatta_puruensis.k141_251022                         C 0 I 3
s Alouatta_seniculus.k141_928287                             33891  7 +     42133 AG----T------C-------CT-T
i Alouatta_seniculus.k141_928287                         C 0 I 3
s Ammotragus_lervia.NIVO01071767.1                         1586323 11 +   2318259 tc----t------c-cttctct---
i Ammotragus_lervia.NIVO01071767.1                       I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178119  5 -    412891 TC----T------C-------C---
i Anoura_caudifer.AnoCau_scaffold_1412                   I 7 I 9
s Antilocapra_americana.AntAmePen_scaffold_21030             51429 11 -     68529 TC----T------CCTTC-GTC---
i Antilocapra_americana.AntAmePen_scaffold_21030         I 2 C 0
s Aotus_azarae.k141_887050                                    2149  7 +     17741 AC----T------C-------CT-T
i Aotus_azarae.k141_887050                               C 0 I 3
s Aotus_griseimembra.k141_3192254                             2774  7 -     15923 AC----T------C-------CT-T
i Aotus_griseimembra.k141_3192254                        C 0 I 3
s Aotus_nancymaae.KZ198451.1                                673056  7 +   5030052 AC----T------C-------CT-T
i Aotus_nancymaae.KZ198451.1                             C 0 I 3
s Aotus_trivirgatus.k141_318729                               3050  7 -     16391 AC----T------C-------CT-T
i Aotus_trivirgatus.k141_318729                          C 0 I 3
s Aotus_vociferans.k141_1514463                               2609  7 -     17186 AC----T------C-------CT-T
i Aotus_vociferans.k141_1514463                          C 0 I 3
s Arctocebus_calabarensis.k141_1364444                       21205  7 -     45910 GC----A------C-------CT-T
i Arctocebus_calabarensis.k141_1364444                   C 0 I 4
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6386  5 -     15198 TC----T------C-------C---
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 7 I 9
s Ateles_geoffroyi_b.tarseq_1536                               275647  7 +  21539123 AG----T------C-------CT-T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 3
s Ateles_belzebuth.k141_1572163                              11815  7 +     48076 AG----T------C-------CT-T
i Ateles_belzebuth.k141_1572163                          C 0 I 3
s Ateles_chamek.k141_615173                                   6950  7 -     28759 AG----T------C-------CT-T
i Ateles_chamek.k141_615173                              C 0 I 3
s Ateles_geoffroyi_a.k141_1283730                              34504  7 +     44353 AG----T------C-------CT-T
i Ateles_geoffroyi_a.k141_1283730                          C 0 I 3
s Ateles_marginatus.k141_970259                              49875  7 -     71267 AG----T------C-------CT-T
i Ateles_marginatus.k141_970259                          C 0 I 3
s Ateles_paniscus.k141_866194                                23933  7 -     33135 AG----T------C-------CT-T
i Ateles_paniscus.k141_866194                            C 0 I 3
s Avahi_laniger.k141_2756659                                  7211  7 +     11645 AC----T------C-------CT-T
i Avahi_laniger.k141_2756659                             C 0 I 3
s Avahi_peyrierasi.k141_1823318                               7219  7 -     19611 AC----T------C-------CT-T
i Avahi_peyrierasi.k141_1823318                          C 0 I 3
s Balaenoptera_acutorostrata.KI537508.1                    7964459 10 -  23207421 TC----T------CCTTC-C-C---
i Balaenoptera_acutorostrata.KI537508.1                  I 2 C 0
s Balaenoptera_bonaerensis.DF411050.1                          959 10 -     25979 TC----T------CCTTC-C-C---
i Balaenoptera_bonaerensis.DF411050.1                    I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87330 11 +    124022 TC----T------CCTTCGC-T---
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 2 C 0
s Bison_bison.KN261452.1                                     22872 11 +    288883 TC----T------CCTTCGC-C---
i Bison_bison.KN261452.1                                 I 2 C 0
s Bos_indicus.CM003047.1                                  20357262 11 +  48749331 TC----T------CCTTCNC-C---
i Bos_indicus.CM003047.1                                 I 2 C 0
s Bos_mutus.JH880303.1                                      755826 11 +   1948126 TC----T------CCTTCGC-C---
i Bos_mutus.JH880303.1                                   I 2 C 0
s Bos_taurus.CM000203.6                                   27545968 11 -  45695690 tc----t------c-cttctcc---
i Bos_taurus.CM000203.6                                  I 2 C 0
s Bubalus_bubalis.KI419123.1                               1530983 11 -   4408762 TC----T------CCTTCGC-C---
i Bubalus_bubalis.KI419123.1                             I 2 C 0
s Cacajao_ayresi.k141_96119                                   8823  6 +     28062 AC----T------C-------CT--
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44117  6 -     91139 AC----T------C-------CT--
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21643  6 +     95584 AC----T------C-------CT--
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21556  6 +    119600 AC----T------C-------CT--
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11127  7 +     18648 AC----T------C-------CT-C
i Callibella_humilis.k141_1233062                        C 0 I 3
s Callimico_goeldii.k141_1609886                             10645  7 -     13885 AC----T------C-------CT-C
i Callimico_goeldii.k141_1609886                         C 0 I 3
s Callithrix_geoffroyi.k119_459277                            2732  7 -      8861 AC----T------C-------CT-C
i Callithrix_geoffroyi.k119_459277                       C 0 I 3
s Callithrix_jacchus.pat_scaffold_3                      165455124  7 + 189096842 AC----T------C-------CT-C
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 3
s Callithrix_kuhlii.k119_102356                               2647  7 +      8664 AC----T------C-------CT-C
i Callithrix_kuhlii.k119_102356                          C 0 I 3
s Camelus_bactrianus.KN276810.1                            7631977 11 +  17673402 TC----T------CCTTCGC-C---
i Camelus_bactrianus.KN276810.1                          I 2 I 7
s Camelus_dromedarius.KN272107.1                           4666264 11 +   7040546 TC----T------CCTTCGC-C---
i Camelus_dromedarius.KN272107.1                         I 2 I 7
s Camelus_ferus.KB017975.1                                 1209923 11 +   1652518 TC----T------CCTTCGC-C---
i Camelus_ferus.KB017975.1                               I 2 I 7
s Capra_aegagrus.CM003241.1                               27410052 11 -  46296322 tc----t------c-cttctct---
i Capra_aegagrus.CM003241.1                              I 2 C 0
s Capra_hircus.CM004588.1                                 26592326 11 +  44709034 tc----t------c-cttctct---
i Capra_hircus.CM004588.1                                I 2 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    486  7 -      1607 TT----T------T-------GT-T
i Capromys_pilorides.CapPil_scaffold_762519              C 0 I 15
s Carlito_syrichta.NW_007259797.1                           271426  7 +    496798 GC----T------C-------CT-T
i Carlito_syrichta.NW_007259797.1                        I 1 I 3
s Carollia_perspicillata.CarPer_scaffold_107871               1244  5 +      9923 CC----T------C-------C---
i Carollia_perspicillata.CarPer_scaffold_107871          I 7 I 9
s Castor_canadensis.CasCan_scaffold_39952                    28627  7 -     39886 TC----C------C-------CT-T
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                     80523 10 -    217609 TC----T------T-TT-TGCC---
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 C 0
s Cavia_aperea.AVPZ01000300.1                              4997356  7 +  23392119 AC----C------T-------GT-T
i Cavia_aperea.AVPZ01000300.1                            C 0 I 3
s Cavia_porcellus.DS562891.1                               5000797  7 +  23407841 AC----C------T-------GT-T
i Cavia_porcellus.DS562891.1                             C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_23560                       63878  7 -     66877 AC----C------T-------GT-T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 3
s Cebuella_niveiventris.k141_592277                           6044  7 -     12580 AC----T------C-------CT-C
i Cebuella_niveiventris.k141_592277                      C 0 I 3
s Cebuella_pygmaea.k141_145798                               44102  7 +     53515 AC----T------C-------CT-C
i Cebuella_pygmaea.k141_145798                           C 0 I 3
s Cebus_albifrons.Contig27                                  373872  7 -  26074798 AC----T------C-------CT-T
i Cebus_albifrons.Contig27                               C 0 I 3
s Cebus_olivaceus.k141_1404781                                8926  7 -     34880 AC----T------C-------CT-T
i Cebus_olivaceus.k141_1404781                           C 0 I 3
s Cebus_unicolor.k141_1654760                                68022  7 -     89041 AC----T------C-------CT-T
i Cebus_unicolor.k141_1654760                            C 0 I 3
s Cephalopachus_bancanus.k141_1689090                         3387  7 -      5494 GC----T------C-------CT-T
i Cephalopachus_bancanus.k141_1689090                    C 0 I 3
s Ceratotherium_simum.JH767749.1                          15493145  9 -  27778364 GC----T------CCTTC---T---
i Ceratotherium_simum.JH767749.1                         I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19978  9 +     27315 GC----T------CCTTC---T---
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 2 C 0
s Cercocebus_atys.KQ010504.1                                142230  7 -   4669795 AC----T------C-------CT-T
i Cercocebus_atys.KQ010504.1                             C 0 I 3
s Cercocebus_chrysogaster.k141_1522556                       45974  7 +     47900 AC----T------C-------CT-T
i Cercocebus_chrysogaster.k141_1522556                   C 0 I 2
s Cercocebus_lunulatus.k141_2500334                           1402  7 -     14410 AC----T------C-------CT-T
i Cercocebus_lunulatus.k141_2500334                      C 0 I 3
s Cercocebus_torquatus.k141_2159127                          45786  7 -    148725 AC----T------C-------CT-T
i Cercocebus_torquatus.k141_2159127                      C 0 I 3
s Cercopithecus_ascanius.k141_3120866                        27996  7 -     40656 AC----T------C-------CT-T
i Cercopithecus_ascanius.k141_3120866                    C 0 I 3
s Cercopithecus_cephus.k141_4183004                           7960  7 +     20796 AC----T------C-------CT-T
i Cercopithecus_cephus.k141_4183004                      C 0 I 3
s Cercopithecus_diana.k141_132293                            13078  7 -     17524 AC----T------C-------CT-T
i Cercopithecus_diana.k141_132293                        C 0 I 3
s Cercopithecus_hamlyni.k141_566925                          28801  7 -     34525 AC----T------C-------CT-T
i Cercopithecus_hamlyni.k141_566925                      C 0 I 3
s Cercopithecus_lowei.k141_2101310                           12581  7 -     25376 AC----T------C-------CT-T
i Cercopithecus_lowei.k141_2101310                       C 0 I 3
s Cercopithecus_albogularis.ctg5                                  365168  7 -  39242232 AC----T------C-------CT-T
i Cercopithecus_albogularis.ctg5                               C 0 I 3
s Cercopithecus_mona.ctg39                                  270895  7 +  21565898 AC----T------C-------CT-T
i Cercopithecus_mona.ctg39                               C 0 I 3
s Cercopithecus_neglectus.k141_858615                        33263  7 -     45857 AC----T------C-------CT-T
i Cercopithecus_neglectus.k141_858615                    C 0 I 3
s Cercopithecus_nictitans.k141_2995370                       28164  7 -     32606 AC----T------C-------CT-T
i Cercopithecus_nictitans.k141_2995370                   C 0 I 3
s Cercopithecus_petaurista.k141_42573                         4326  7 +      8499 AC----T------C-------CT-T
i Cercopithecus_petaurista.k141_42573                    C 0 I 3
s Cercopithecus_pogonias.k141_6079                           26722  7 +     70610 AC----T------C-------CT-T
i Cercopithecus_pogonias.k141_6079                       C 0 I 3
s Cercopithecus_roloway.k141_3012935                         23683  7 +     36323 AC----T------C-------CT-T
i Cercopithecus_roloway.k141_3012935                     C 0 I 3
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13632  7 -     19938 GC----T------T-------CT-C
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 2 I 1
s Cheirogaleus_major.k141_666340                             31584  7 -     33796 GT----T------C-------CT-T
i Cheirogaleus_major.k141_666340                         C 0 I 3
s Cheirogaleus_medius.k141_759766                             6098  7 -     15404 GT----T------C-------CT-T
i Cheirogaleus_medius.k141_759766                        C 0 I 3
s Cheracebus_lucifer.k141_2312002                             9930  6 -     32913 AC----T------C-------CT--
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20343  6 -     40346 AC----T------C-------CT--
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20598  6 +    216457 AC----T------C-------CT--
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20387  6 +     39636 AC----T------C-------CT--
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239698  7 -   2543920 GC----C------C-------AT-T
i Chinchilla_lanigera.JH722012.1                         C 0 I 3
s Chiropotes_albinasus.k141_1946120                           4982  6 +      5346 AC----T------C-------CT--
i Chiropotes_albinasus.k141_1946120                      I 4 C 0
s Chiropotes_israelita.k141_313004                           43454  6 -    112038 AT----T------C-------CT--
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9005  6 +     34062 AT----T------C-------CT--
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344584  7 +  18827391 AC----T------C-------CT-T
i Chlorocebus_aethiops.ctg25                             C 0 I 3
s Chlorocebus_pygerythrus.k141_3063162                       11126  7 -     44032 AC----T------C-------CT-T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 I 3
s Chlorocebus_sabaeus.CM001947.1                            305909  7 - 135778131 AC----T------C-------CT-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 3
s Choloepus_didactylus.ChoDid_scaffold_70559                 15763  7 +     15858 GC----T------C-------CT-T
i Choloepus_didactylus.ChoDid_scaffold_70559             I 11 I 1
s Choloepus_hoffmanni.KN194906.1                            607338  7 -    839153 GC----T------C-------CT-T
i Choloepus_hoffmanni.KN194906.1                         I 11 I 1
s Chrysochloris_asiatica.ChrAsi_scaffold_2783671               274  7 +       421 AC----T------C-------CT-T
i Chrysochloris_asiatica.ChrAsi_scaffold_2783671         I 2 I 4
s Colobus_angolensis.KN981557.1                             410314  7 -   2368649 AC----T------C-------CT-T
i Colobus_angolensis.KN981557.1                          C 0 I 3
s Colobus_guereza.LG01                                      380195  7 - 200372422 AC----T------C-------CT-T
i Colobus_guereza.LG01                                   C 0 I 3
s Colobus_polykomos.k141_906115                               3752  7 -     84244 AC----T------C-------CT-T
i Colobus_polykomos.k141_906115                          C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3726  5 -      8242 GC----T------C-------C---
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 2 I 3
s Cricetomys_gambianus.CriGam_scaffold_14425                 45155  5 -     83289 G-----C------A-------TT--
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 6
s Crocidura_indochinensis.CroInd_scaffold_77846              10789  5 +     12657 TC----T------C-------T---
i Crocidura_indochinensis.CroInd_scaffold_77846          I 2 I 10
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5307 11 +     87169 GT----T------C-TTTTCCC---
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646356  7 -   1526836 GC----C------T-------TT-T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19552  7 +     50838 GT----C------T-------GT-T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 15
s Cuniculus_paca.CunPac_flattened_line_7025                   5279  7 +     36344 AC----C------C-------AT-T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 3
s Dasyprocta_punctata.DasPun_flattened_line_15900            29060  7 +     75252 AC----C------C-------CT-T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 3
s Dasypus_novemcinctus.JH564415.1                          2110982  7 -   2246927 gc----t------c-------tt-t
i Dasypus_novemcinctus.JH564415.1                        I 1 I 1
s Daubentonia_madagascariensis.ctg71                        293520  7 +  12879189 GC----T------C-------TT-T
i Daubentonia_madagascariensis.ctg71                     C 0 I 17
s Delphinapterus_leucas.KZ290073.1                        18632867 10 -  35494412 tc----t------c--cttccc---
i Delphinapterus_leucas.KZ290073.1                       I 2 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665429  9 -   1390856 GC----T------CCTTC---T---
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140218  4 -    198055 GC----T------C-----------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 2 I 6
s Dinomys_branickii.DinBra_scaffold_10381                    99777  7 -    115145 GC----C------C-------AT-T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 3
s Dipodomys_ordii.KN672350.1                              18951521  7 -  37912305 GC----C------C-------CT-T
i Dipodomys_ordii.KN672350.1                             C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_89095                   6452  7 -     10735 GC----C------C-------CT-T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 3
s Echinops_telfairi.JH980293.1                            62856468  6 - 111700974 GC----T------C--------T-T
i Echinops_telfairi.JH980293.1                           I 2 I 4
s Eidolon_helvum.AWHC01266696.1                               7216  5 +     19438 GC----T------C-------C---
i Eidolon_helvum.AWHC01266696.1                          I 2 I 6
s Elaphurus_davidianus.JRFZ01104969.1                       240688 11 -    607251 TC----T------CCTTCGC-C---
i Elaphurus_davidianus.JRFZ01104969.1                    I 2 C 0
s Elephantulus_edwardii.JH947257.1                         1226700  7 +  10337057 GC----T------C-------TA-T
i Elephantulus_edwardii.JH947257.1                       I 2 I 4
s Enhydra_lutris.KZ291758.1                               24917054 11 +  41312741 gt----t------c-cttttcc---
i Enhydra_lutris.KZ291758.1                              I 2 C 0
s Eptesicus_fuscus.JH977646.1                             12579834 11 +  14770903 GC----TCCTTCTC-------C---
i Eptesicus_fuscus.JH977646.1                            I 2 C 0
s Equus_asinus.JREZ01000139.1                              3042350  9 -   4378816 GC----T------CCTTC---T---
i Equus_asinus.JREZ01000139.1                            I 2 I 2
s Equus_caballus.CM000403.2                               21376288  9 +  39960074 GC----T------CCTTC---T---
i Equus_caballus.CM000403.2                              I 2 I 2
s Equus_przewalskii.KK951119.1                              412270  9 -    498745 GC----T------CCTTC---T---
i Equus_przewalskii.KK951119.1                           I 2 I 2
s Erythrocebus_patas.Contig38                               264120  7 +  21539334 AC----T------C-------CT-T
i Erythrocebus_patas.Contig38                            C 0 I 3
s Eschrichtius_robustus.EscRob_flattened_line_8968           72073 10 -    133382 TC----T------CCTT-GC-C---
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              660 10 -      1072 TC----T------CCTT-GC-C---
i Eubalaena_japonica.EubJap_flattened_line_257977        I 2 C 0
s Eulemur_albifrons.k141_51491                               15725  7 -     24895 GT----T------C-------CT-T
i Eulemur_albifrons.k141_51491                           C 0 I 3
s Eulemur_collaris.k141_601111                               43435  7 -     70999 GT----T------C-------CT-T
i Eulemur_collaris.k141_601111                           C 0 I 3
s Eulemur_coronatus.k141_384460                              87405  7 +    112731 GT----T------C-------CT-T
i Eulemur_coronatus.k141_384460                          C 0 I 3
s Eulemur_flavifrons.k141_433119                             43967  7 +     68309 GT----T------C-------CT-T
i Eulemur_flavifrons.k141_433119                         C 0 I 3
s Eulemur_fulvus.k141_636316                                 54292  7 -     65740 GT----T------C-------CT-T
i Eulemur_fulvus.k141_636316                             C 0 I 3
s Eulemur_macaco.k141_1562045                                24924  7 -     75513 GT----T------C-------CT-T
i Eulemur_macaco.k141_1562045                            C 0 I 3
s Eulemur_mongoz.k141_232305                                 49119  7 -     97555 GT----T------C-------CT-T
i Eulemur_mongoz.k141_232305                             C 0 I 3
s Eulemur_rubriventer.k141_1423786                            5843  7 +     30972 GT----T------C-------CT-T
i Eulemur_rubriventer.k141_1423786                       C 0 I 3
s Eulemur_rufus.k141_514691                                  43563  7 -     52037 GT----T------C-------CT-T
i Eulemur_rufus.k141_514691                              C 0 I 3
s Eulemur_sanfordi.k141_1122526                              59966  7 -    111500 GT----T------C-------CT-T
i Eulemur_sanfordi.k141_1122526                          C 0 I 3
s Felis_catus.CM001381.2                                 186247768 11 - 206538554 GT----T------C-TTCTCCC---
i Felis_catus.CM001381.2                                 I 2 C 0
s Felis_catus_fca126.CM031415.1                          185117554 11 - 205367284 GT----T------C-TTCTCCC---
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28651 11 -     30238 GT----T------C-TTCTCCC---
i Felis_nigripes.FelNig_flattened_line_31944             I 2 C 0
s Fukomys_damarensis.KN121974.1                            2922931  7 -   3816255 GG----C------C-------CT-T
i Fukomys_damarensis.KN121974.1                          C 0 I 3
s Galago_moholi.ctg3793                                     126577  7 -    137831 GT----G------C-------CT-T
i Galago_moholi.ctg3793                                  C 0 I 4
s Galago_senegalensis.k141_991736                            10122  7 +     22493 GT----G------C-------CT-T
i Galago_senegalensis.k141_991736                        C 0 I 4
s Galagoides_demidoff.k141_561628                            22192  7 -     32986 GC----G------C-------CT-T
i Galagoides_demidoff.k141_561628                        C 0 I 4
s Galeopterus_variegatus.GalVar_scaffold_51812                2105  7 -     28519 GC----T------C-------CT-T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 I 3
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92395 11 -     95226 TC----T------CCTTCGC-C---
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 2 C 0
s Glis_glis.GliGli_scaffold_163929                            2251  7 -      6791 GC----C------C-------CT-T
i Glis_glis.GliGli_scaffold_163929                       C 0 I 3
s Gorilla_beringei.k141_3358147                               6737  7 -      8343 AC----T------C-------CT-T
i Gorilla_beringei.k141_3358147                          C 0 I 3
s Gorilla_gorilla.LT578336.1                                 72230  7 +  33314783 AC----T------C-------CT-T
i Gorilla_gorilla.LT578336.1                             I 175 I 108
s Graphiurus_murinus.GraMur_scaffold_10447                    3323  4 -     78134 GC----T------C-----------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 3
s Hapalemur_alaotrensis.k141_330369                          15650  7 -     40692 GT----T------C-------CT-T
i Hapalemur_alaotrensis.k141_330369                      C 0 I 3
s Hapalemur_gilberti.k141_646465                             37052  7 +     49394 GT----T------C-------CT-T
i Hapalemur_gilberti.k141_646465                         C 0 I 3
s Hapalemur_griseus.k141_763500                              61920  7 -     66874 GT----T------C-------CT-T
i Hapalemur_griseus.k141_763500                          C 0 I 3
s Hapalemur_meridionalis.k141_258450                         10794  7 -     42923 GT----T------C-------CT-T
i Hapalemur_meridionalis.k141_258450                     C 0 I 3
s Hapalemur_occidentalis.k141_578367                         17793  7 -     53142 GT----T------C-------CT-T
i Hapalemur_occidentalis.k141_578367                     C 0 I 3
s Helogale_parvula.HelPar_flattened_line_2585                31741 11 -    327341 GT----T------CTTTTTC-C---
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10070 11 +     48891 TC----T------CCTTCTC-T---
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 2 C 0
s Heterocephalus_glaber.JH602082.1                         1933347  7 -  22651954 GC----C------C-------CT-T
i Heterocephalus_glaber.JH602082.1                       C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1186  6 +      8654 GC----T------C-------CT--
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 2 I 4
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8575 11 -     36432 TC----T------CCTTCGC-C---
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552556  5 -   1711038 AC----T------C-------C---
i Hipposideros_armiger.JXIK01000431.1                    I 2 I 6
s Hipposideros_galeritus.HipGal_scaffold_164997               1995  5 -      2730 AC----C------C-------C---
i Hipposideros_galeritus.HipGal_scaffold_164997          I 2 I 6
s Hoolock_leuconedys.ctg274                                    143761  7 -    630532 AC----T------C-------CT-T
i Hoolock_leuconedys.ctg274                                 C 0 I 3
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71135 11 +     83186 GT----T------C-TTTTCCC---
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 2 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72757  7 +    143317 AC----C------C-------TT-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 3
s Hylobates_agilis.k141_1155965                               6795  7 +     12352 AC----T------C-------CT-T
i Hylobates_agilis.k141_1155965                          C 0 I 3
s Hylobates_klossii.k141_738755                              13979  7 +     55766 AC----T------C-------CT-T
i Hylobates_klossii.k141_738755                          C 0 I 3
s Hylobates_pileatus_b.LG02                                       2053579  7 + 191637585 AC----T------C-------CT-T
i Hylobates_pileatus_b.LG02                                     C 0 I 3
s Hylobates_pileatus_a.tarseq_633                            7802457  7 +  11177569 AC----T------C-------CT-T
i Hylobates_pileatus_a.tarseq_633                          C 0 I 3
s Hystrix_cristata.HysCri_scaffold_5660                       8091  7 -    135385 GC----C------C-------CT-T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 3
s Ictidomys_tridecemlineatus.JH393364.1                     387793  7 +   7955117 gG----T------C-------CC-A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Indri_indri.k141_2415743                                    3354  7 +     11955 GC----T------C-------CT-T
i Indri_indri.k141_2415743                               C 0 I 3
s Inia_geoffrensis.IniGeo_flattened_line_69447               10968 10 -     16823 TC----T------CCTTC-C-C---
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 2 C 0
s Jaculus_jaculus.JH725527.1                               1241034  7 +   9596543 GC----T------T-------CT-G
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_3970                 72808 10 -     97402 TC----T------CGTTC-C-C---
i Kogia_breviceps.KogBre_flattened_line_3970             I 2 C 0
s Lagothrix_lagothricha.k141_246028                          44198  7 +    110728 AG----T------C-------CT-T
i Lagothrix_lagothricha.k141_246028                      C 0 I 3
s Lasiurus_borealis.LasBor_scaffold_16567                    64165 11 -     65777 GC----TCCTTCTC-------C---
i Lasiurus_borealis.LasBor_scaffold_16567                I 2 C 0
s Lemur_catta.scaffold_24                                 14760447  7 +  30322482 GT----T------C-------CT-T
i Lemur_catta.scaffold_24                                C 0 I 3
s Leontocebus_fuscicollis.k141_2994775                        5105  7 -     13097 AC----T------C-------CT-C
i Leontocebus_fuscicollis.k141_2994775                   I 4 I 3
s Leontocebus_illigeri.k141_2951200                           4859  7 +      5940 AC----T------C-------CT-C
i Leontocebus_illigeri.k141_2951200                      I 4 I 3
s Leontocebus_nigricollis.k141_3905062                        4682  7 -      5717 AC----T------C-------CT-C
i Leontocebus_nigricollis.k141_3905062                   I 4 I 3
s Leontopithecus_chrysomelas.k141_1327670                    11068  7 -     11567 AC----T------C-------CT-C
i Leontopithecus_chrysomelas.k141_1327670                C 0 I 3
s Leontopithecus_rosalia.k141_349454                         12449  7 -     12945 AC----T------C-------CT-C
i Leontopithecus_rosalia.k141_349454                     C 0 I 3
s Lepilemur_ankaranensis.k141_567626                          9959  7 +     29618 GC----T------C-------CT-T
i Lepilemur_ankaranensis.k141_567626                     C 0 I 3
s Lepilemur_dorsalis.k141_387009                              9955  7 +     31569 GC----T------C-------CT-T
i Lepilemur_dorsalis.k141_387009                         C 0 I 3
s Lepilemur_ruficaudatus.k141_330196                          9965  7 +     24756 GC----T------C-------CT-T
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 3
s Lepilemur_septentrionalis.k141_360456                       9965  7 +     16388 GC----T------C-------CT-T
i Lepilemur_septentrionalis.k141_360456                  C 0 I 3
s Leptonychotes_weddellii.KB714746.1                        814447 11 -   3914936 gt----t------c-cttttcc---
i Leptonychotes_weddellii.KB714746.1                     I 2 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18810  7 +     24238 GC----T------C-------CT-T
i Lepus_americanus.LepAme_scaffold_56121                 I 1 I 3
s Lipotes_vexillifer.KE559953.1                             342153 10 +    662738 tc----t------c--cttccc---
i Lipotes_vexillifer.KE559953.1                          I 2 C 0
s Lophocebus_aterrimus.ctg367                               335115  7 -   1826925 AC----T------C-------CT-T
i Lophocebus_aterrimus.ctg367                            C 0 I 3
s Loris_lydekkerianus.k141_2031736                           12275  7 +     19643 GT----G------C-------CT-T
i Loris_lydekkerianus.k141_2031736                       C 0 I 4
s Loris_tardigradus.ctg83                                  5045945  7 -   6120653 GT----G------C-------CT-T
i Loris_tardigradus.ctg83                                C 0 I 4
s Loxodonta_africana.GL010049.1                           39085853  8 +  43346337 GC----T------C-------CTTT
i Loxodonta_africana.GL010049.1                          I 2 I 3
s Macaca_arctoides.k141_1757516                              46504  7 -     61512 AC----T------C-------CT-T
i Macaca_arctoides.k141_1757516                          C 0 I 3
s Macaca_assamensis.Contig5                                 374166  7 -  60120075 AC----T------C-------CT-T
i Macaca_assamensis.Contig5                              C 0 I 3
s Macaca_cyclopis.k119_263443                                26434  7 +     30207 AC----T------C-------CT-T
i Macaca_cyclopis.k119_263443                            C 0 I 3
s Macaca_fascicularis.k141_1617581                            1272  7 -      5035 AC----T------C-------CT-T
i Macaca_fascicularis.k141_1617581                       C 0 I 3
s Macaca_fuscata.k119_546792                                 26387  7 +     30527 AC----T------C-------CT-T
i Macaca_fuscata.k119_546792                             C 0 I 3
s Macaca_leonina.k141_321385                                 37563  7 -     50087 AC----T------C-------CT-T
i Macaca_leonina.k141_321385                             C 0 I 3
s Macaca_maura.k141_1103459                                  47307  7 +     51645 AC----T------C-------CT-T
i Macaca_maura.k141_1103459                              C 0 I 3
s Macaca_mulatta.NC_041758.1                                416510  7 - 187317192 AC----T------C-------CT-T
i Macaca_mulatta.NC_041758.1                             C 0 I 3
s Macaca_nemestrina.KQ007038.1                              400740  7 +  25927173 AC----T------C-------CT-T
i Macaca_nemestrina.KQ007038.1                           C 0 I 3
s Macaca_nigra.k141_2818840                                  49912  7 -     62418 AC----T------C-------CT-T
i Macaca_nigra.k141_2818840                              C 0 I 3
s Macaca_radiata.k141_2139468                                 2443  7 +     14901 AC----T------C-------CT-T
i Macaca_radiata.k141_2139468                            C 0 I 3
s Macaca_siberu.k141_2185972                                 46384  7 +     59329 AC----T------C-------CT-T
i Macaca_siberu.k141_2185972                             C 0 I 3
s Macaca_silenus.Contig273                                  272292  7 +    668171 AC----T------C-------CT-T
i Macaca_silenus.Contig273                               C 0 I 3
s Macaca_thibetana.k99_45532                                   930  7 -      5049 AC----T------C-------CT-T
i Macaca_thibetana.k99_45532                             C 0 I 3
s Macaca_tonkeana.k141_339739                                 4090  7 +     17132 AC----T------C-------CT-T
i Macaca_tonkeana.k141_339739                            C 0 I 3
s Macroglossus_sobrinus.MacSob_scaffold_4024                224184  5 -    270270 GC----T------C-------C---
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 2 I 6
s Mandrillus_leucophaeus.scaffold280                        323580  7 +  24302211 AC----T------C-------CT-T
i Mandrillus_leucophaeus.scaffold280                     C 0 I 3
s Mandrillus_sphinx.Contig270                               358411  7 -    752769 AC----T------C-------CT-T
i Mandrillus_sphinx.Contig270                            C 0 I 3
s Manis_javanica.JSZB01003497.1                             674499  8 -    737560 AC----T------C---CTC-C---
i Manis_javanica.JSZB01003497.1                          I 2 C 0
s Manis_pentadactyla.KN006162.1                             221799  8 +    317179 AC----T------C---CTC-C---
i Manis_pentadactyla.KN006162.1                          I 2 C 0
s Marmota_marmota.CZRN01000018.1                           7502007  7 +  40650429 GG----T------C-------CC-A
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                       151345  5 +    207569 GC----T------C-------C---
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 I 15
s Mellivora_capensis.MelCap_flattened_line_19308             27166 11 -     74585 GT----T------CCTTTTC-C---
i Mellivora_capensis.MelCap_flattened_line_19308         I 2 I 15
s Meriones_unguiculatus.MerUng_scaffold_7390                 51109  5 -    140813 A-----C------A-------TC--
i Meriones_unguiculatus.MerUng_scaffold_7390             I 10 I 22
s Mesoplodon_bidens.MesBid_scaffold_6114                     88437 10 +     93471 TC----T------CCTTC-C-C---
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 2 C 0
s Mico_argentatus.k141_582562                                11228  7 +     17804 AC----T------C-------CT-C
i Mico_argentatus.k141_582562                            C 0 I 3
s Mico_humeralifer.k141_1180625                              11728  7 -     12984 AC----T------C-------CT-C
i Mico_humeralifer.k141_1180625                          C 0 I 3
s Mico_schneideri.k141_1877700                                     20044  7 -     26561 AC----T------C-------CT-C
i Mico_schneideri.k141_1877700                                 C 0 I 3
s Microcebus_murinus.CM007674.1                           74985797  7 +  93316391 GT----T------C-------CT-T
i Microcebus_murinus.CM007674.1                          C 0 I 3
s Microgale_talazaci.MicTal_scaffold_6613                    47655  6 +    145209 GC----A------C--------T-G
i Microgale_talazaci.MicTal_scaffold_6613                I 2 I 4
s Micronycteris_hirsuta.MicHir_scaffold_2233                186037  2 +    200668 TC-----------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 7 I 9
s Miniopterus_natalensis.LDJU01000034.1                    6364172 11 -   8254450 GC----TCCTTCTC-------T---
i Miniopterus_natalensis.LDJU01000034.1                  I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43079 11 -     48117 GC----TCCTTCTC-------T---
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 2 C 0
s Miopithecus_ogouensis.k141_1534655                         23615  7 -     27822 AC----T------C-------CT-C
i Miopithecus_ogouensis.k141_1534655                     C 0 I 3
s Mirounga_angustirostris.MirAng_flattened_line_54046         9458 11 +     27589 GT----T------CCTTTTC-C---
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 2 C 0
s Mirza_zaza.k141_766280                                     53580  7 -     62432 GT----T------C-------CT-T
i Mirza_zaza.k141_766280                                 C 0 I 3
s Monodon_monoceros.MonMon_M_scaffold_103                   360542 10 +    437263 TC----T------CCTTC-C-C---
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180262  5 +    366855 TC----T------C-------C---
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 7 I 9
s Moschus_moschiferus.MosMos_scaffold_13123                  26515 11 -     82753 TC----T------CCTTCGC-C---
i Moschus_moschiferus.MosMos_scaffold_13123              I 2 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19474 11 -     63510 GT----T------C-TTTTCCC---
i Mungos_mungo.MunMun_flattened_line_18455               I 2 C 0
s Murina_feae.MurFea_scaffold_17764                          40119 11 +     47283 GC----TCCTCCTT-------C---
i Murina_feae.MurFea_scaffold_17764                      I 7 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85148  7 -     86153 GC----T------C-------CT-T
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 247 I 3
s Mustela_putorius.JH418006.1                             14356075 11 +  14710649 gt----t------c-cttttcc---
i Mustela_putorius.JH418006.1                            I 2 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64058  7 +     67721 AT----C------T-------GT-T
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 15
s Myotis_brandtii.KE162005.1                               9794394 15 +  10118263 GCTCGCTCCTTCTC-------C---
i Myotis_brandtii.KE162005.1                             I 2 C 0
s Myotis_davidii.KB100139.1                                4388568 15 +   6019432 GCTCGCTCCTTCTC-------C---
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                               384355 14 +   4330536 GCTCGCTC-TTCTC-------C---
i Myotis_lucifugus.GL429869.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3389 15 +     18357 GCTCGCTCCTTCTC-------C---
i Myotis_myotis.MyoMyo_scaffold_66571                    I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120734  7 +    130748 GC----T------C-------CT-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 2 I 4
s Nannospalax_galili.KL204047.1                             947673  5 +   3037898 -C----C------C-------TT--
i Nannospalax_galili.KL204047.1                          C 0 I 3
s Nasalis_larvatus.k141_1350636                              30271  7 +     34575 AC----T------C-------CT-T
i Nasalis_larvatus.k141_1350636                          C 0 I 3
s Neophocaena_asiaeorientalis.KZ687982.1                   1233208 10 -   7148211 tc----t------c--cttccc---
i Neophocaena_asiaeorientalis.KZ687982.1                 I 2 C 0
s Nomascus_annamensis.k141_1771965                           54687  7 -    132029 AC----T------C-------CT-T
i Nomascus_annamensis.k141_1771965                       C 0 I 3
s Nomascus_concolor.k141_735679                              10782  7 -     16345 AC----T------C-------CT-T
i Nomascus_concolor.k141_735679                          C 0 I 3
s Nomascus_gabriellae.k141_57920                             16667  7 +     22201 AC----T------C-------CT-T
i Nomascus_gabriellae.k141_57920                         C 0 I 3
s Nomascus_siki_b.tarseq_93                            8414888  7 -  22158432 AC----T------C-------CT-T
i Nomascus_siki_b.tarseq_93                          C 0 I 3
s Nomascus_siki_a.k141_941534                                  27065  7 -     54323 AC----T------C-------CT-T
i Nomascus_siki_a.k141_941534                              C 0 I 3
s Nycticebus_bengalensis.LG01                             93639172  7 + 196305487 GC----G------C-------CT-T
i Nycticebus_bengalensis.LG01                            C 0 I 4
s Nycticebus_coucang.k141_1296080                             1775  7 -      9413 GC----G------C-------CT-T
i Nycticebus_coucang.k141_1296080                        C 0 I 4
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566555  7 - 199412804 GC----G------C-------CT-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 4
s Ochotona_princeps.JH802162.1                             2557854  7 -   3988456 AC----T------C-------CA-T
i Ochotona_princeps.JH802162.1                           I 1 I 30
s Octodon_degus.JH651603.1                                11056159  7 -  11899542 GT----C------T-------GT-T
i Octodon_degus.JH651603.1                               C 0 I 15
s Odobenus_rosmarus.KB229312.1                             1452877 11 +   2017862 gt----t------c-cttttcc---
i Odobenus_rosmarus.KB229312.1                           I 2 C 0
s Odocoileus_virginianus.KZ100018.1                         437284 11 -    630418 TC----T------CCTTCGC-C---
i Odocoileus_virginianus.KZ100018.1                      I 2 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15479 11 +    150152 TC----T------CCTT-TGCC---
i Okapia_johnstoni.LVCL01S0005463.1                      I 2 C 0
s Orcinus_orca.KB316932.1                                  8103610 10 +  10937097 tc----t------c--cttccc---
i Orcinus_orca.KB316932.1                                I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                637  7 +     11607 GC----T------C-------CT-T
i Orycteropus_afer.OryAfe_flattened_line_201229          I 2 I 3
s Oryctolagus_cuniculus.CM000791.1                       107104606  7 - 174332312 GC----T------C-------CT-T
i Oryctolagus_cuniculus.CM000791.1                       I 1 I 3
s Otolemur_crassicaudatus.k141_649260                        41724  7 -     51505 GC----G------C-------CT-T
i Otolemur_crassicaudatus.k141_649260                    C 0 I 4
s Otolemur_garnettii.GL873799.1                             354728  7 +   1103335 GC----G------C-------CT-T
i Otolemur_garnettii.GL873799.1                          C 0 I 4
s Ovis_aries.CM001607.2                                   26405190 11 -  44047080 tc----t------c-cttctct---
i Ovis_aries.CM001607.2                                  I 2 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5709 11 +     17875 TC----T------CCTTCTC-T---
i Ovis_canadensis.OviCan_scaffold_67953                  I 2 C 0
s Pan_troglodytes.NBAG03003091.1                             13456  8 -     26668 AC----TC-----C-------CT-T
i Pan_troglodytes.NBAG03003091.1                         C 0 I 155
s Panthera_onca.PanOnc_flattened_line_3271                   25474 11 -    230217 GT----T------C-TTCTCCC---
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                              18462800 11 -  18783137 GT----T------C-TTCTCCC---
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               3973459 11 +   8748460 GT----T------C-TTCTCCT---
i Panthera_tigris.KE722367.1                             I 2 C 0
s Pantholops_hodgsonii.KE114653.1                          1616718 11 +   2937107 tc----t------c-cttctct---
i Pantholops_hodgsonii.KE114653.1                        I 2 C 0
s Papio_anubis.CM001495.2                                   244589  7 - 183742232 AC----T------C-------CT-T
i Papio_anubis.CM001495.2                                C 0 I 3
s Papio_cynocephalus.k141_1507553                            10874  7 +     21308 AC----T------C-------CT-T
i Papio_cynocephalus.k141_1507553                        C 0 I 3
s Papio_hamadryas.Contig39                                  293617  7 -  20919399 AC----T------C-------CT-T
i Papio_hamadryas.Contig39                               C 0 I 3
s Papio_kindae.k141_2214839                                  23522  7 -     27687 AC----T------C-------CT-T
i Papio_kindae.k141_2214839                              C 0 I 3
s Papio_papio.k141_3538738                                     193  7 +     10553 AC----T------C-------CT-T
i Papio_papio.k141_3538738                               C 0 I 3
s Papio_ursinus.k141_5784434                                   153  7 -     10386 AC----T------C-------CT-T
i Papio_ursinus.k141_5784434                             C 0 I 3
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16055 11 +     78924 GT----T------C-TTTTCCT---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Perodicticus_ibeanus.k141_1921260                          28055  7 +     31479 GC----A------C-------CT-T
i Perodicticus_ibeanus.k141_1921260                      C 0 I 4
s Perodicticus_potto.k141_1854441                            20423  7 -     24908 GC----A------C-------CT-T
i Perodicticus_potto.k141_1854441                        C 0 I 4
s Perognathus_longimembris.PerPac_flattened_line_89005        2863  7 +      9367 GC----C------C-------TT-T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 32
s Petromus_typicus.PetTyp_scaffold_17301                     32905  7 -     56120 TT----C------C-------CT-T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159               5136 10 -     63832 TA----T------CCTTC-C-C---
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 2 C 0
s Piliocolobus_badius.k141_2704958                            3702  7 +     55023 AC----T------C-------CT-T
i Piliocolobus_badius.k141_2704958                       C 0 I 3
s Piliocolobus_gordonorum.k141_381342                         3240  7 -     89929 AC----T------C-------CT-T
i Piliocolobus_gordonorum.k141_381342                    C 0 I 3
s Piliocolobus_kirkii.k141_1310104                            3830  7 +     40849 AC----T------C-------CT-T
i Piliocolobus_kirkii.k141_1310104                       C 0 I 3
s Piliocolobus_tephrosceles.PDMG02000141.1                  255505  7 +  14605196 AC----T------C-------CT-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 3
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4971 11 +     22231 GC----TCCTTCTC-------C---
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 2 C 0
s Pithecia_albicans.k141_1239476                             65821  6 +    207309 AC----T------C-------CT--
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6913  6 -     25401 AC----T------C-------CT--
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32657  6 +     58159 AC----T------C-------CT--
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32933  6 +     63561 AC----T------C-------CT--
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32693  6 +     51148 AC----T------C-------CT--
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557663  6 -   4542175 AC----T------C-------CT--
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32677  6 +     51125 AC----T------C-------CT--
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2153 10 +     19503 TC----T------CCTTC-C-C---
i Platanista_gangetica.PlaMin_flattened_line_83166       I 2 C 0
s Plecturocebus_bernhardi.k141_2549090                        9095  6 +     39866 AC----T------C-------CT--
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4177  6 -      9282 AC----T------C-------CT--
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43581  6 -     87950 AC----T------C-------CT--
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43975  6 -     88961 AC----T------C-------CT--
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8673  6 -     39403 AC----T------C-------CT--
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43624  6 +     87928 AC----T------C-------CT--
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8672  6 -     60166 AC----T------C-------CT--
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15609  6 -     67232 AC----T------C-------CT--
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43525  6 -     90634 AC----T------C-------CT--
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44992  6 +     89403 AC----T------C-------CT--
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178891  7 - 189387572 AC----T------C-------CT-T
i Pongo_abelii.CM009266.2                                C 0 I 3
s Pongo_pygmaeus.ctg66                                      193708  7 -   9816681 AC----T------C-------CT-T
i Pongo_pygmaeus.ctg66                                   C 0 I 3
s Presbytis_comata.k141_1230337                              28850  7 +     69807 AC----T------C-------CT-T
i Presbytis_comata.k141_1230337                          C 0 I 3
s Presbytis_mitrata.k141_584736                              46031  7 -     80239 AC----T------C-------CT-T
i Presbytis_mitrata.k141_584736                          C 0 I 3
s Procavia_capensis.ProCapCap_scaffold_165387                 5177  6 +      7663 GC----T------C-------CT--
i Procavia_capensis.ProCapCap_scaffold_165387            I 2 I 4
s Prolemur_simus.MPIZ01000396.1                            1983595  7 +   4620579 GT----T------C-------CT-T
i Prolemur_simus.MPIZ01000396.1                          C 0 I 3
s Propithecus_coquerelli.NW_012148875.1                    1567105  7 -   2598838 GC----T------C-------CT-T
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 3
s Propithecus_coronatus.k141_209299                           4743  7 -      7103 GC----T------C-------CT-T
i Propithecus_coronatus.k141_209299                      C 0 I 3
s Propithecus_diadema.k141_153680                             5340  7 -     11706 GC----T------C-------CT-T
i Propithecus_diadema.k141_153680                        C 0 I 3
s Propithecus_edwardsi.k141_635656                            9077  7 -     30655 GC----T------C-------CT-T
i Propithecus_edwardsi.k141_635656                       C 0 I 3
s Propithecus_perrieri.k141_1496898                          35391  7 +     46564 GC----T------C-------CT-T
i Propithecus_perrieri.k141_1496898                      C 0 I 3
s Propithecus_tattersalli.k141_1127767                       95670  7 -     98465 GC----T------C-------CT-T
i Propithecus_tattersalli.k141_1127767                   C 0 I 3
s Propithecus_verreauxi.k141_1047036                          9309  7 +     35169 GC----T------C-------CT-T
i Propithecus_verreauxi.k141_1047036                     C 0 I 3
s Psammomys_obesus.NESX01036366.1                            38623  5 +     52041 A-----C------A-------TC--
i Psammomys_obesus.NESX01036366.1                        I 10 I 22
s Pteronotus_parnellii.KE847780.1                            53155  5 -     66298 tc----t------c-------c---
i Pteronotus_parnellii.KE847780.1                        I 7 I 9
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5649 11 -     18639 GT----T------CCTTTTC-C---
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 2 C 0
s Pteropus_alecto.KB030862.1                               5841756  5 -  28871421 GC----T------C-------C---
i Pteropus_alecto.KB030862.1                             I 2 I 6
s Pteropus_vampyrus.KN525825.1                             3538271  5 -   4952924 GC----T------C-------C---
i Pteropus_vampyrus.KN525825.1                           I 2 I 6
s Puma_concolor.QAVW01001104.1                            18100116 12 +  38429054 GT----T------CATTCTCCC---
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             28220  7 +     91421 AC----T------C-------CT-T
i Pygathrix_cinerea.k141_1153803                         C 0 I 3
s Pygathrix_nigripes_b.ctg100                                  154704  7 -   7812017 AC----T------C-------CT-T
i Pygathrix_nigripes_b.ctg100                               C 0 I 3
s Pygathrix_nigripes_a.k141_215492                              9077  7 +     72585 AC----T------C-------CT-T
i Pygathrix_nigripes_a.k141_215492                         C 0 I 3
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54198 11 +     55069 TC----T------CCTTCGC-C---
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 2 C 0
s Rattus_norvegicus.chr16                                 37023901  8 -  90668790 A-----C------A---C-CTTC--
i Rattus_norvegicus.chr16                                I 10 I 26
s Rhinolophus_sinicus.LVEH01000134.1                       2915732  5 +   3329780 AC----T------C-------C---
i Rhinolophus_sinicus.LVEH01000134.1                     I 2 I 25
s Rhinopithecus_bieti.k119_778604                             2804  7 +      7119 GC----T------C-------CT-T
i Rhinopithecus_bieti.k119_778604                        C 0 I 3
s Rhinopithecus_roxellana.NC_044550.1                    104123419  7 + 195417433 GC----T------C-------CT-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 3
s Rhinopithecus_strykeri.ctg102                             237646  7 -   7961872 GC----T------C-------CT-T
i Rhinopithecus_strykeri.ctg102                          C 0 I 3
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76255  5 -    116970 GC----T------C-------C---
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 2 I 6
s Saguinus_bicolor.k141_1429097                               4980  7 +     27962 AC----T------C-------CT-C
i Saguinus_bicolor.k141_1429097                          I 4 I 3
s Saguinus_geoffroyi.k141_3779887                             4871  7 +      6077 AC----T------C-------CG-C
i Saguinus_geoffroyi.k141_3779887                        I 4 I 3
s Saguinus_imperator.k141_1898058                             4964  7 +      5971 AC----T------C-------CT-C
i Saguinus_imperator.k141_1898058                        I 4 I 3
s Saguinus_inustus.k141_2469308                               4885  4 +      5932 AC----T------C-----------
i Saguinus_inustus.k141_2469308                          I 4 I 3
s Saguinus_labiatus.k141_2380921                              3227  7 -      4390 AC----T------C-------CT-C
i Saguinus_labiatus.k141_2380921                         I 4 I 3
s Saguinus_midas.LG03                                       392664  7 - 209938924 AC----T------C-------CT-C
i Saguinus_midas.LG03                                    I 4 I 3
s Saguinus_mystax.k141_8077960                                4833  6 +      5979 AC----T------C-------CT--
i Saguinus_mystax.k141_8077960                           I 4 I 1
s Saguinus_oedipus.k141_1280589                               1400  7 -     22275 AC----T------C-------CG-C
i Saguinus_oedipus.k141_1280589                          I 4 I 3
s Saiga_tatarica.SaiTat_scaffold_39512                        8877 11 +     16473 TC----T------CCTTC-CCT---
i Saiga_tatarica.SaiTat_scaffold_39512                   I 2 C 0
s Saimiri_boliviensis.NW_024100920.1                       1109996  7 + 121099817 tc----t------c-------tt-t
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 3
s Saimiri_cassiquiarensis.k141_1467335                       31563  7 -     47369 TC----T------C-------TT-T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 I 3
s Saimiri_macrodon.k141_1173117                              31949  7 -     79414 TC----T------C-------TT-T
i Saimiri_macrodon.k141_1173117                          C 0 I 3
s Saimiri_oerstedii.k141_245838                              28640  7 -     34454 TC----T------C-------TT-T
i Saimiri_oerstedii.k141_245838                          C 0 I 3
s Saimiri_sciureus.k141_1467173                              16041  7 -     22428 TC----T------C-------TT-T
i Saimiri_sciureus.k141_1467173                          C 0 I 3
s Saimiri_ustus.k141_360372                                  31195  7 -     47109 TC----T------C-------TT-T
i Saimiri_ustus.k141_360372                              C 0 I 3
s Sapajus_apella.ctg103                                     239246  7 +   5703754 AC----T------C-------CT-T
i Sapajus_apella.ctg103                                  C 0 I 3
s Sapajus_macrocephalus.k141_796559                           8836  7 +     21866 AC----T------C-------CT-T
i Sapajus_macrocephalus.k141_796559                      C 0 I 3
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116888  5 +    313613 GT----T------C-------C---
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 I 3
s Semnopithecus_entellus.k141_158471                         26546  7 +     27374 AC----T------C-------CT-T
i Semnopithecus_entellus.k141_158471                     C 0 I 3
s Semnopithecus_hypoleucos.k141_1910531                      30058  7 +     58920 AC----T------C-------CT-T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 I 3
s Semnopithecus_johnii.k141_843753                           16556  7 -     45317 AC----T------C-------CT-T
i Semnopithecus_johnii.k141_843753                       C 0 I 3
s Semnopithecus_priam.k141_714795                            24214  7 -     42441 AC----T------C-------CT-T
i Semnopithecus_priam.k141_714795                        C 0 I 3
s Semnopithecus_schistaceus.k141_1432920                     26892  7 -     29113 AC----T------C-------CT-T
i Semnopithecus_schistaceus.k141_1432920                 C 0 I 3
s Semnopithecus_vetulus.k141_244474                          29967  7 -     48123 AC----T------C-------CT-T
i Semnopithecus_vetulus.k141_244474                      C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_126            1865167  5 -   1910179 TC----T------C-------C---
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 C 0
s Sorex_araneus.JH798187.1                                 4672256  5 +  18376816 CT----T------C-------T---
i Sorex_araneus.JH798187.1                               I 2 I 10
s Spermophilus_dauricus.KZ294078.1                         1869371  7 +   3870691 GG----T------C-------CC-A
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525              7731 11 -     97271 GT----T------CCCTTTC-C---
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 2 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125891 11 +    196729 GT----T------C-TTTTCCC---
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                    6644942 11 +  69701581 TC----T------CTTTCAC-C---
i Sus_scrofa.CM000828.4                                  I 2 C 0
s Symphalangus_syndactylus.tarseq_199                       392147  7 +   1523678 AC----T------C-------CT-T
i Symphalangus_syndactylus.tarseq_199                    C 0 I 3
s Tadarida_brasiliensis.TadBra_scaffold_54991                15307 11 +     22964 GC----TCCTTCTC-------T---
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 2 I 28
s Tamandua_tetradactyla.TamTet_scaffold_224794                3725  7 +      5583 GC----T------C-------CT-T
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 2 I 4
s Tapirus_indicus.TapInd_scaffold_7432                      192630  9 +    199430 CC----T------CCTTC---T---
i Tapirus_indicus.TapInd_scaffold_7432                   I 2 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    106598  9 -    539355 GC----T------CCTTC---T---
i Tapirus_terrestris.TapTer_scaffold_755                 I 2 I 2
s Tarsius_lariang.k141_1733899                                1659  7 +      9917 GC----T------C-------TT-T
i Tarsius_lariang.k141_1733899                           C 0 I 3
s Tarsius_wallacei.k141_226975                                8457  7 +     20590 GC----T------C-------TT-T
i Tarsius_wallacei.k141_226975                           C 0 I 3
s Theropithecus_gelada.CM009954.1                           354398  7 - 186847797 AC----T------C-------CT-T
i Theropithecus_gelada.CM009954.1                        C 0 I 3
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25062  7 -     33621 GT----C------C-------CT-T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_31955                   20711 10 -     31044 GCTC-CT------T-------CT-C
i Tolypeutes_matacus.TolMat_scaffold_31955               I 2 I 1
s Tonatia_saurophila.TonSau_scaffold_294                    481154  5 -    610378 TC----C------C-------C---
i Tonatia_saurophila.TonSau_scaffold_294                 I 7 I 9
s Trachypithecus_auratus.k141_1189070                        22091  7 +     26378 AC----T------C-------CT-T
i Trachypithecus_auratus.k141_1189070                    C 0 I 3
s Trachypithecus_crepusculus.k141_539312                     34767  7 -     78344 AC----T------C-------CT-T
i Trachypithecus_crepusculus.k141_539312                 C 0 I 3
s Trachypithecus_cristatus.k141_180416                       21416  7 +     25722 AC----T------C-------CT-T
i Trachypithecus_cristatus.k141_180416                   C 0 I 3
s Trachypithecus_francoisi.k141_1453105                      29723  7 -     62838 AC----T------C-------CT-T
i Trachypithecus_francoisi.k141_1453105                  C 0 I 3
s Trachypithecus_geei.k141_1001272                           29767  7 +     46913 AC----T------C-------CT-T
i Trachypithecus_geei.k141_1001272                       C 0 I 3
s Trachypithecus_germaini.k141_57262                         10574  7 -     28527 AC----T------C-------CT-T
i Trachypithecus_germaini.k141_57262                     C 0 I 3
s Trachypithecus_hatinhensis.k141_31479                      31658  7 -     64340 AC----T------C-------CT-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 3
s Trachypithecus_laotum.k141_928651                          29696  7 -     63452 AC----T------C-------CT-T
i Trachypithecus_laotum.k141_928651                      C 0 I 3
s Trachypithecus_leucocephalus.k141_96450                    11143  7 +     22490 AC----T------C-------CT-T
i Trachypithecus_leucocephalus.k141_96450                C 0 I 3
s Trachypithecus_melamera.k141_591572                         4566  7 -      6147 AC----T------C-------CT-T
i Trachypithecus_melamera.k141_591572                    C 0 I 3
s Trachypithecus_obscurus.k141_848057                        11479  7 -     13050 AC----T------C-------CT-T
i Trachypithecus_obscurus.k141_848057                    C 0 I 3
s Trachypithecus_phayrei.ctg124                             256709  7 -   6242583 AC----T------C-------CT-T
i Trachypithecus_phayrei.ctg124                          C 0 I 3
s Trachypithecus_pileatus.k141_2622778                        2737  7 +     19340 AC----T------C-------CT-T
i Trachypithecus_pileatus.k141_2622778                   C 0 I 3
s Tragulus_javanicus.TraJav_scaffold_3462                   174485 11 -    200418 TC----T------CCTT-TGGC---
i Tragulus_javanicus.TraJav_scaffold_3462                I 2 C 0
s Trichechus_manatus.JH594705.1                            6482548  8 -  10818551 GC----T------C-------CTTT
i Trichechus_manatus.JH594705.1                          I 2 I 3
s Tupaia_chinensis.KB320699.1                              1835386  7 -   4065304 AC----T------C-------CT-T
i Tupaia_chinensis.KB320699.1                            C 0 I 54
s Tupaia_tana.TupTan_flattened_line_394                       9406  7 -     70247 AC----T------G-------CT-C
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 9
s Tursiops_truncatus.MRVK01000835.1                       17366723 10 -  33153633 tc----t------c--cttccc---
i Tursiops_truncatus.MRVK01000835.1                      I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4601  5 -     21056 GC----T------C-------C---
i Uropsilus_gracilis.UroGra_scaffold_46687               I 2 I 3
s Ursus_maritimus.KK499267.1                                183051 11 +   5085361 gt----t------c-cttttcc---
i Ursus_maritimus.KK499267.1                             I 2 C 0
s Varecia_rubra.k141_787544                                  26251  7 -     30710 GT----T------C-------CT-T
i Varecia_rubra.k141_787544                              C 0 I 3
s Varecia_variegata.k141_289850                              25158  7 -    147434 GT----T------C-------CT-T
i Varecia_variegata.k141_289850                          C 0 I 3
s Vicugna_pacos.KN270157.1                                   77311 11 +   5488506 TC----T------CCTTCGC-C---
i Vicugna_pacos.KN270157.1                               I 2 I 7
s Xerus_inauris.XerIna_scaffold_2302                        175128  7 -    224448 GC----T------C-------CC-A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_17732         30085 11 -     86975 GT----T------CCTTTTC-C---
i Zalophus_californianus.ZalCal_flattened_line_17732     I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1002  7 -      1899 GC----C------T-------CT-T
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 I 8
s Ziphius_cavirostris.ZipCav_flattened_line_504766            2007 10 +      2126 TC----T------CCTTC-C-C---
i Ziphius_cavirostris.ZipCav_flattened_line_504766       I 2 C 0
e Erinaceus_europaeus.JH835339.1                           3666978  1 +   7059049 I
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Desmodus_rotundus.KZ672289.1                            11866248  7 -  20541912 I
e Vulpes_lagopus.VulLag_flattened_line_12041                105951  0 -    112863 C
e Otocyon_megalotis.JAEUCK010005147.1                        40228  0 +    559221 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                199185  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Lycaon_pictus.CM007581.1                                41615589  0 +  59628241 C
e Canis_lupus_orion.HG994398.1                            45108015  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41616434  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          223299  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                     9956  0 -     23171 C
e CanFam4.chr16                                           42506320  0 +  60362399 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    49922  6 +     77746 I
e Peromyscus_maniculatus.KI615324.1                         247549  6 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4339  6 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    93678 248 -    140218 I
e Noctilio_leporinus.NocLep_scaffold_7894                   128981  0 -    149072 C
e Mus_spretus.CM004101.1                                  39497745 17 + 130317789 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Mus_musculus.chr8                                       41688451 17 + 129401213 I
e Mus_caroli.LT608237.1                                   35595225 17 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15963323 308 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17430128 58 +  29670104 I
e Ellobius_talpinus.LOJH01026522.1                           13853 246 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          31882 249 +    110024 I
e Cricetulus_griseus.LT883664.1                          213115745 58 - 224834208 I
e Condylura_cristata.JH655891.1                           35808193  3 +  53390261 I
e Aplodontia_rufa.AprRuf_scaffold_46868                      17130  5 -     32367 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6444 58 +     36723 TTC---TCACAG----A--T-A------GCA-A----ATTTCCT---------A--ATG---AGGA------GA--G---AGCTGAT-TGAAGGA-C-C-ATGATGAT
s Acinonyx_jubatus.LLWD01001279.1                           813869 57 +   1699592 -TC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--CTGAGAG---------GA--A---ACCCTGT-TTAAGGG-T-CCA-GATTAT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26240 21 +     63021 ----------------------------------------------------------------------------G---AA-TTGT-----GGG-T-GTCTGATGAT
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 22 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416326 57 +  29979442 -tc---tcacaG----A--C-A------GTA-C----ATCTCCA---------A--ATGAGAA---------GA--A---ACCCTGT-TTAAGGG-C-CCA-GATTAC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216666 48 +    347723 -TC---TCACAG----A--C-A------GTA-C----ATCTCCA---------A--ACGAGAA---------GA--A---ACCTTGT-TTAAGGG-C-----------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 8
s Allactaga_bullata.AllBul_scaffold_20030                    19545 24 -     61208 ----------------------------------------------------------------------------G---AAC-TGT-TGAAG-A-T-CCGTGATGAT
i Allactaga_bullata.AllBul_scaffold_20030                I 33 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49092 58 +     53615 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Allenopithecus_nigroviridis.k141_3755588               I 3 C 0
s Allochrocebus_lhoesti.k141_3412094                          1123 58 +     13857 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Allochrocebus_lhoesti.k141_3412094                     I 3 C 0
s Allochrocebus_preussi.k141_1993939                         17674 58 -     21945 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Allochrocebus_preussi.k141_1993939                     I 3 C 0
s Allochrocebus_solatus.k141_3554717                         19359 58 +     32033 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Allochrocebus_solatus.k141_3554717                     I 3 C 0
s Alouatta_belzebul.k141_1011583                             73192 58 -     84148 TTC---TCACAG----A--T-A------GCA-A----GGTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Alouatta_belzebul.k141_1011583                         I 3 C 0
s Alouatta_caraya.k141_1109140                               45431 58 -     78289 TTC---TCACAG----A--T-A------GCA-A----GTTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Alouatta_caraya.k141_1109140                           I 3 C 0
s Alouatta_discolor.k141_2561099                             44870 58 +     55831 TTC---TCACAG----A--T-A------GCA-A----GGTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Alouatta_discolor.k141_2561099                         I 3 C 0
s Alouatta_juara.k141_1687208                                43320 58 -     64179 TTC---TCACAG----A--T-A------GCA-A----GTTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Alouatta_juara.k141_1687208                            I 3 C 0
s Alouatta_macconnelli.k141_1277969                            427 58 -      3959 TTC---TCACAG----A--C-A------GCA-A----GTTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TAAAGGG-C-C-ATGATGAT
i Alouatta_macconnelli.k141_1277969                      I 3 C 0
s Alouatta_nigerrima.k141_376068                             41945 58 +     45454 TTC---TCACAG----A--T-A------GCA-A----GTTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Alouatta_nigerrima.k141_376068                         I 3 C 0
s Alouatta_palliata.k141_638677                              47594 58 +     70886 TTC---TCACAG----A--T-A------GCA-A----GTTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Alouatta_palliata.k141_638677                          I 3 C 0
s Alouatta_puruensis.k141_251022                              9767 58 +     30854 TTC---TCACAG----A--T-A------GCA-A----GTTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Alouatta_puruensis.k141_251022                         I 3 C 0
s Alouatta_seniculus.k141_928287                             33901 58 +     42133 TTC---TCACAG----A--T-A------GCA-A----GTTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Alouatta_seniculus.k141_928287                         I 3 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586334 58 +   2318259 -tc---tctctg----a--t-g------gTA-C----ATCTCCA---------A--GTG---A---GGA---GG--G---AGTGTGT-TTAAGGG-T-ACACGACGAT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178133 23 -    412891 ------------------------------G-CGTACATCTCCA---------A--ATG---A---GGA---GA----------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   I 9 I 26
s Antilocapra_americana.AntAmePen_scaffold_21030             51440 58 -     68529 -TC---TCTCTG----A--T-G------GTA-C----ATCTCCA---------A--ATG---A---GGA---GA--G---AGTGTGT-TTAAGGG-T-GCATGATGAT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2159 58 +     17741 TTC---TCACAG----A--T-A------GCA-A----ATTCCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGAAGGG-C-C-GTGATGAT
i Aotus_azarae.k141_887050                               I 3 C 0
s Aotus_griseimembra.k141_3192254                             2784 58 -     15923 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Aotus_griseimembra.k141_3192254                        I 3 C 0
s Aotus_nancymaae.KZ198451.1                                673066 58 +   5030052 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Aotus_nancymaae.KZ198451.1                             I 3 C 0
s Aotus_trivirgatus.k141_318729                               3060 58 -     16391 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Aotus_trivirgatus.k141_318729                          I 3 C 0
s Aotus_vociferans.k141_1514463                               2619 58 -     17186 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Aotus_vociferans.k141_1514463                          I 3 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17135 58 -     32367 T-C---ACATAG----A--T-A------GAA-T----AGTTCCA---------T--ATG---AAGA----C--A--G---AGCTTGC-TGAAGGG-C-TCATGATGAT
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 5 C 0
s Arctocebus_calabarensis.k141_1364444                       21216 38 -     45910 ------------------------------------------CA---------T--AGA---GAGA------GA--G---AGCTTGT-TGGAGAG-T-CCTCGATGAC
i Arctocebus_calabarensis.k141_1364444                   I 4 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6400 23 -     15198 ------------------------------G-TGTACATCTCCA---------G--ATG---A---GG-G--GA----------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 9 I 25
s Ateles_geoffroyi_b.tarseq_1536                               275657 58 +  21539123 TTC---TCACAG----A--T-A------GCA-A----CTTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGGAGGG-C-C-ATGATGGT
i Ateles_geoffroyi_b.tarseq_1536                            I 3 C 0
s Ateles_belzebuth.k141_1572163                              11825 58 +     48076 TTC---TCACAG----A--T-A------GCA-A----CTTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGGAGGG-C-C-ATGATGGT
i Ateles_belzebuth.k141_1572163                          I 3 C 0
s Ateles_chamek.k141_615173                                   6960 58 -     28759 TTC---TCACAG----A--T-A------GCA-A----CTTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGGAGGG-C-C-ATGATGGT
i Ateles_chamek.k141_615173                              I 3 C 0
s Ateles_geoffroyi_a.k141_1283730                              34514 58 +     44353 TTC---TCACAG----A--T-A------GCA-A----CTTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGGAGGG-C-C-ATGATGGT
i Ateles_geoffroyi_a.k141_1283730                          I 3 C 0
s Ateles_marginatus.k141_970259                              49885 58 -     71267 TTC---TCACAG----A--T-A------GCA-A----CTTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGGAGGG-C-C-ATGATGGT
i Ateles_marginatus.k141_970259                          I 3 C 0
s Ateles_paniscus.k141_866194                                23943 58 -     33135 TTC---TCACAG----A--T-A------GCA-A----CTTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGGAGGG-C-C-ATGATGGT
i Ateles_paniscus.k141_866194                            I 3 C 0
s Avahi_laniger.k141_2756659                                  7221 60 +     11645 CAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------AA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Avahi_laniger.k141_2756659                             I 3 C 0
s Avahi_peyrierasi.k141_1823318                               7229 60 -     19611 CAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------AA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Avahi_peyrierasi.k141_1823318                          I 3 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964469 57 -  23207421 -TC---TCACAG----A--T-A------GTA-C----AT-TCCA---------C--ATG---A---GGA---GA--G---AGCACGT-TTAAGGG-C-CCATGATAAT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                          969 57 -     25979 -TC---TCACAG----A--T-A------GTA-C----AT-TCCA---------C--ATG---A---GGA---GA--G---AGCACGT-TTAAGGG-C-CCATGATAAT
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87341 58 +    124022 -CC---TCTCTG----A--T-G------GTA-C----ATCTCCA---------A--GTG---A---GGA---GG--G---AGTGTGT-TTAAGGG-T-ACATGATGAT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22883 58 +    288883 -TC---TCTCTG----A--T-G------GTA-C----ATCTCCA---------A--GTG---A---GGA---GG--G---AGTGTGT-TTAAGGG-T-ACATGATGAT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357273 58 +  48749331 -TC---TCTCTG----A--T-G------GTA-C----ATCTCCA---------A--GTG---A---GGA---GG--G---AGTGTGT-TTAAGGG-T-ACATGATGAT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755837 58 +   1948126 -TC---TCTCTG----A--T-G------GTA-C----ATCTCCA---------A--GTG---A---GGA---GG--G---AGTGTGT-TTAAGGG-T-ACATGATGAT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27545979 58 -  45695690 -tc---tctctg----a--t-G------GTA-C----ATCTCCA---------A--GTG---A---GGA---GG--G---AGTGTGT-TTAAGGG-T-ACATGATGAT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1530994 58 -   4408762 -TC---CCTCTG----A--T-G------GTA-C----ATCTCCA---------A--GTG---A---GGA---GG--G---AGTGTGT-TTAAGGG-T-ACATGATGAT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Callibella_humilis.k141_1233062                            11137 60 +     18648 TTC---CCACGG----GTAT-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGCGGT-GGAAGGG-C-C-GTGATGAT
i Callibella_humilis.k141_1233062                        I 3 C 0
s Callimico_goeldii.k141_1609886                             10655 58 -     13885 TTC---TCACAG----G--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-CGAAGGG-C-C-GTGATGAT
i Callimico_goeldii.k141_1609886                         I 3 C 0
s Callithrix_geoffroyi.k119_459277                            2742 58 -      8861 TTC---TCACGG----G--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-AGAAGGG-C-G-GTGATGAT
i Callithrix_geoffroyi.k119_459277                       I 3 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455134 58 + 189096842 TTC---TCACGG----G--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-GGAAGGG-C-G-GTGATGAT
i Callithrix_jacchus.pat_scaffold_3                      I 3 C 0
s Callithrix_kuhlii.k119_102356                               2657 58 +      8664 TTC---TCATGG----G--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-AAAAGGG-C-G-GTGATGAT
i Callithrix_kuhlii.k119_102356                          I 3 C 0
s Camelus_bactrianus.KN276810.1                            7631995 21 +  17673402 ------------------------------------------------------------------------------------TGT-TTAAGGG-C-CCATGATGAT
i Camelus_bactrianus.KN276810.1                          I 7 C 0
s Camelus_dromedarius.KN272107.1                           4666282 21 +   7040546 ------------------------------------------------------------------------------------TGT-TTAAGGG-C-CCATGATGAT
i Camelus_dromedarius.KN272107.1                         I 7 C 0
s Camelus_ferus.KB017975.1                                 1209941 21 +   1652518 ------------------------------------------------------------------------------------TGT-TTAAGGG-C-CCATGATGAT
i Camelus_ferus.KB017975.1                               I 7 C 0
s CanFam4.chr16                                           42506320 43 +  60362399 --------------------------------C----ATCTCCG---------A--ATGAGAA---------GA--A---ATCCTGT-TTAAGTG-C-CCA-GATTAT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9956 43 -     23171 --------------------------------C----ATCTCCG---------A--ATGAGAA---------GA--A---ATCCTGT-TTAAGTG-C-CCA-GATTAT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223299 43 +   9314153 --------------------------------C----ATCTCCG---------A--ATGAGAA---------GA--A---ATCCTGT-TTAAGTG-C-CCA-GATTAT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616434 43 +  59632846 --------------------------------C----ATCTCCG---------A--ATGAGAA---------GA--A---ATCCTGT-TTAAGTG-C-CCA-GATTAT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108015 43 -  63665305 --------------------------------C----ATCTCCG---------A--ATGAGAA---------GA--A---ATCCTGT-TTAAGTG-C-CCA-GATTAT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410063 58 -  46296322 -tc---tctctg----a--t-g------GTA-C----ATCTCCA---------A--GTG---A---GGA---GG--G---AGTGTGT-TTAAGGG-T-ACATGACGAT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592337 58 +  44709034 -tc---tctctg----a--t-g------GTA-C----ATCTCCA---------A--GTG---A---GGA---GG--G---AGTGCGT-TTAAGGG-T-ACATGACGAT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    508 43 -      1607 -------------------------------------ATCTCCA---------A--ATG---AGGAG------A--G---AGTGTGG-TGAAGGG-C-TTATGTTGAT
i Capromys_pilorides.CapPil_scaffold_762519              I 15 C 0
s Carlito_syrichta.NW_007259797.1                           271436 68 +    496798 CTC---TGACAG----A--C-A------ATA-G----AATCTCTCCTCTGACAG--TTG---AGGA------GA--G---CGCTTGT-TGGAGGA-C-CCATGATGAT
i Carlito_syrichta.NW_007259797.1                        I 3 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1258 23 +      9923 ------------------------------G-CGCACATCTCCA---------A--ATG---A---GGA---GG----------------------------------
i Carollia_perspicillata.CarPer_scaffold_107871          I 9 I 26
s Castor_canadensis.CasCan_scaffold_39952                    28638 24 -     39886 -------CACAG----A--T-A------GTC-T----ATCTCCA---------A--ATG---A---------------------------------------------
i Castor_canadensis.CasCan_scaffold_39952                I 4 I 26
s Catagonus_wagneri.CatWag_scaffold_2839                     80533 58 -    217609 -TT---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--ATG---A---GGA---GA--G---AACGAGT-TTAAGTG-C-CCGTGATGAT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997366 58 +  23392119 TTC---TCACAG----G--T-A------GTC-T----ATCTCCA---------A--ACA---AGGAG------A--G---A-TGTGT-TGAAGGG-C-TTATGTCAGG
i Cavia_aperea.AVPZ01000300.1                            I 3 C 0
s Cavia_porcellus.DS562891.1                               5000807 58 +  23407841 TTC---TCACAG----G--T-A------GTC-T----ATCTCCA---------A--ACA---AGGAG------A--G---A-TGTGT-TGAAGGG-C-TTATGTTAGG
i Cavia_porcellus.DS562891.1                             I 3 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63888 58 -     66877 TTC---TCACAG----G--T-A------GTC-T----ATCTCCA---------A--ACA---AGGAG------A--G---A-TGTGT-TGAAGGG-C-TTATGTTAGG
i Cavia_tschudii.CavTsc_scaffold_23560                   I 3 C 0
s Cebuella_niveiventris.k141_592277                           6054 58 -     12580 TTC---TCACGG----G--T-A------GCA-G----ATTCCCA---------A--ATG---AGGA------AA--G---AGGTGGT-GGAAGGG-C-C-GTGATGAT
i Cebuella_niveiventris.k141_592277                      I 3 C 0
s Cebuella_pygmaea.k141_145798                               44112 58 +     53515 TTC---TCATGG----G--T-A------GCA-G----ATTTCTA---------A--ATG---AGGA------AA--G---AGGTGGT-GGAAGGG-C-C-GTGATGAT
i Cebuella_pygmaea.k141_145798                           I 3 C 0
s Cebus_albifrons.Contig27                                  373882 58 -  26074798 TTC---TAACAG----A--T-A------GCA-A----ATTTCCA---------G--GTG---AGGA------CA--G---AGGTGGC-TGAAGGG-C-C-ATGATGAT
i Cebus_albifrons.Contig27                               I 3 C 0
s Cebus_olivaceus.k141_1404781                                8936 58 -     34880 TTC---TAACAG----A--T-A------GCA-A----ATTTCCA---------G--GTG---AGGA------CA--G---AGGTGGC-TGAAGGG-C-C-ATGATGAT
i Cebus_olivaceus.k141_1404781                           I 3 C 0
s Cebus_unicolor.k141_1654760                                68032 58 -     89041 TTC---TAACAG----A--T-A------GCA-A----ATTTCCA---------G--GTG---AGGA------CA--G---AGGTGGC-TGAAGGG-C-C-ATGATGAT
i Cebus_unicolor.k141_1654760                            I 3 C 0
s Cephalopachus_bancanus.k141_1689090                         3397 68 -      5494 CTC---TGACAG----A--C-A------ATA-G----AATCTCTCCTTTGACAG--TTG---AGGA------GA--G---AGCTTGT-TGGAGGA-C-CCATGATGAT
i Cephalopachus_bancanus.k141_1689090                    I 3 C 0
s Ceratotherium_simum.JH767749.1                          15493154 57 -  27778364 --CCTCTCACAG----A--C-A------GAA-C----ATCTCCA---------A--ATG---A---------GA--C---AGCCTGT-TTAAGGG-A-CCGTGATGAT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          19987 57 +     27315 --CCTCTCACAG----A--C-A------GAA-C----ATCTCCA---------A--ATG---A---------GA--C---AGCCTGT-TTAAGGG-A-CCGTGATGAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142240 58 -   4669795 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAAGG-C-C-ATGATGAT
i Cercocebus_atys.KQ010504.1                             I 3 C 0
s Cercocebus_chrysogaster.k141_1522556                       45983 54 +     47900 -------CACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Cercocebus_chrysogaster.k141_1522556                   I 2 C 0
s Cercocebus_lunulatus.k141_2500334                           1412 58 -     14410 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAAGG-C-C-ATGATGAT
i Cercocebus_lunulatus.k141_2500334                      I 3 C 0
s Cercocebus_torquatus.k141_2159127                          45796 58 -    148725 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAAGG-C-C-ATGATGAT
i Cercocebus_torquatus.k141_2159127                      I 3 C 0
s Cercopithecus_ascanius.k141_3120866                        28006 58 -     40656 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Cercopithecus_ascanius.k141_3120866                    I 3 C 0
s Cercopithecus_cephus.k141_4183004                           7970 58 +     20796 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Cercopithecus_cephus.k141_4183004                      I 3 C 0
s Cercopithecus_diana.k141_132293                            13088 58 -     17524 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Cercopithecus_diana.k141_132293                        I 3 C 0
s Cercopithecus_hamlyni.k141_566925                          28811 58 -     34525 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Cercopithecus_hamlyni.k141_566925                      I 3 C 0
s Cercopithecus_lowei.k141_2101310                           12591 58 -     25376 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Cercopithecus_lowei.k141_2101310                       I 3 C 0
s Cercopithecus_albogularis.ctg5                                  365178 58 -  39242232 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Cercopithecus_albogularis.ctg5                               I 3 C 0
s Cercopithecus_mona.ctg39                                  270905 58 +  21565898 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Cercopithecus_mona.ctg39                               I 3 C 0
s Cercopithecus_neglectus.k141_858615                        33273 58 -     45857 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Cercopithecus_neglectus.k141_858615                    I 3 C 0
s Cercopithecus_nictitans.k141_2995370                       28174 58 -     32606 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Cercopithecus_nictitans.k141_2995370                   I 3 C 0
s Cercopithecus_petaurista.k141_42573                         4336 58 +      8499 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Cercopithecus_petaurista.k141_42573                    I 3 C 0
s Cercopithecus_pogonias.k141_6079                           26732 58 +     70610 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Cercopithecus_pogonias.k141_6079                       I 3 C 0
s Cercopithecus_roloway.k141_3012935                         23693 58 +     36323 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Cercopithecus_roloway.k141_3012935                     I 3 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13640 57 -     19938 -TC---GCACAC----A--T-G------GT--A-T--GTCTCCC---------A--AAG---AACA------GG--G---AGCCTGT-GCAACCG-T-CCACGAC-AT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 1 C 0
s Cheirogaleus_major.k141_666340                             31594 60 -     33796 CAC---TCACAG----G--TAA------GTA-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Cheirogaleus_major.k141_666340                         I 3 C 0
s Cheirogaleus_medius.k141_759766                             6108 60 -     15404 CAC---TCACAG----G--TAA------GTA-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Cheirogaleus_medius.k141_759766                        I 3 C 0
s Chinchilla_lanigera.JH722012.1                           1239708 59 -   2543920 TTC---TCACGG----A--T-A------GTC-T----ATGTCCA---------A--ATG---AGGAG------A--G---AGTGTGG-TGAAGAG-C-TTAGGTTGAT
i Chinchilla_lanigera.JH722012.1                         I 3 C 0
s Chlorocebus_aethiops.ctg25                                344594 58 +  18827391 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-T-C-ATGATGAT
i Chlorocebus_aethiops.ctg25                             I 3 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11136 58 -     44032 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-T-C-ATGATGAT
i Chlorocebus_pygerythrus.k141_3063162                   I 3 C 0
s Chlorocebus_sabaeus.CM001947.1                            305919 58 - 135778131 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-T-C-ATGATGAT
i Chlorocebus_sabaeus.CM001947.1                         I 3 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15771 58 +     15858 -TC---TCACAG----A--T-A------GTG-A----GTCTCCA---------A--ATG---AATA------GA--G---AGCCTGT-TCAACCG-T-CCACAATGAT
i Choloepus_didactylus.ChoDid_scaffold_70559             I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            607346 58 -    839153 -TC---TCACAG----A--T-A------GTG-A----GTCTCCA---------A--ATG---AATA------GA--G---AGCCTGT-TCAACCG-T-CCACAATGAT
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2783671               285 57 +       421 -TC---CCACAG----A--T-A------GTG-T----TTCCTCA---------A--AAG---AGAA------GA--G---AGTTTGT-T-AAGGG-T-CCATGATGAT
i Chrysochloris_asiatica.ChrAsi_scaffold_2783671         I 4 C 0
s Colobus_angolensis.KN981557.1                             410324 58 -   2368649 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGACGAT
i Colobus_angolensis.KN981557.1                          I 3 C 0
s Colobus_guereza.LG01                                      380205 58 - 200372422 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Colobus_guereza.LG01                                   I 3 C 0
s Colobus_polykomos.k141_906115                               3762 58 -     84244 TTC---TCACAG----A--G-A------GCA-A----ATTTCCA---------G--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Colobus_polykomos.k141_906115                          I 3 C 0
s Condylura_cristata.JH655891.1                           35808196 26 +  53390261 -TC---TCACAG----A--T-A------GTG-G----AGCTCCA---------A--ATA-------------------------------------------------
i Condylura_cristata.JH655891.1                          I 3 I 16
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3734 53 -      8242 ------TCACAG----A--T-A------GTA-C----ATCTCTA---------A--ATA---A---------GA--G---AGCATGT-TTAAGGG-T-CCCTGATGAT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 3 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 45166 29 -     83289 ------TCATAG----T--T-A------GTTCT----CTCTTCA---------A--ATG---GAGA------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             I 6 I 22
s Cricetulus_griseus.LT883664.1                          213115803 28 - 224834208 -------CACAG----T--T-A------CTTCT----ATCTGCT---------A--ATG---GAAA------------------------------------------
i Cricetulus_griseus.LT883664.1                          I 58 I 21
s Crocidura_indochinensis.CroInd_scaffold_77846              10804 18 +     12657 --------------------------------T----ATCTTCA---------A--ATG---A---------GAAGA-------------------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          I 10 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5318 57 +     87169 -TC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--ATGAGAA---------GA--A---ACCCTGT-TTAAGGG-C-CCA-GATTAT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646366 57 -   1526836 TGC---TCACAG----G--T-A------GTA-G----ATCTACA---------A--ATG---AGG--------A--G---AGTTTGT-GGAAGGG-C-TCATGATGAC
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 3 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19574 43 +     50838 -------------------------------------ATCTCCA---------A--ATG---GGGAG------A--C---AGTGTGG-TGAAGGG-C-TTATGTTGAT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 15 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5289 59 +     36344 TTC---TCACAG----G--T-A------GTC-T----ATCTCCA---------A--ACA---AGGAG------A--G---AGTGTGT-TAAAGAG-C-TTATGTTGAT
i Cuniculus_paca.CunPac_flattened_line_7025              I 3 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29070 58 +     75252 TTC---TCACAG----C--T-G------GTC-T----ATCTCCA---------A--ACA---AGGAG------A--T---A-TGTGC-TGAAGGG-C-TTTTGCTGAG
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 3 C 0
s Dasypus_novemcinctus.JH564415.1                          2110990 58 -   2246927 -tc---tcacac----a--c-a------gtt-a---ggtctcct---------a--aag---aaga------ga--g---cacCTGT-GCAAGGG-T-CCATGAC-AT
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                        293544 35 +  12879189 --------------------------------------------------------ATG---AGGA------GA--T---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Daubentonia_madagascariensis.ctg71                     I 17 C 0
s Delphinapterus_leucas.KZ290073.1                        18632877 57 -  35494412 -tc---tcacAG----A--T-A------GTA-C----AT-TCCA---------C--ATC---A---GGA---GA--G---AGCATGT-TTAAGGG-C-CCATGATAAT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866255 17 -  20541912 -------------------------------------ATCTCCA---------A--ATC---A---GGA---GA----------------------------------
i Desmodus_rotundus.KZ672289.1                           I 7 I 26
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665438 57 -   1390856 --CCTCTCACAG----G--T-G------GAA-C----ATCTCCA---------A--ATG---A---------GA--C---AGCCTGT-TTAAGAG-A-CCATGATGAT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140228 53 -    198055 ------TCACAG----A--C-A------GAA-C----ATCTCCA---------A--ATG---A---------GA--C---AGCCTGT-TTAAGGG-A-CCATGATGAT
i Diceros_bicornis.DicBicMic_scaffold_5955               I 6 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99787 59 -    115145 TTC---TCTTAG----A--T-A------GCC-T----GCCTCCA---------A--ATG---AGGAG------A--G---AGGGTGG-TGAAGGG-C-TTAGTTTGAT
i Dinomys_branickii.DinBra_scaffold_10381                I 3 C 0
s Dipodomys_ordii.KN672350.1                              18951531 30 -  37912305 -TC---TCTCAG----A--G-G------CTA-T----ATCTCCA---------A--ATG---AGGA------------------------------------------
i Dipodomys_ordii.KN672350.1                             I 3 I 26
s Dipodomys_stephensi.DipSte_scaffold_89095                   6462 30 -     10735 -TC---TCTCAG----A--G-A------CTA-T----ATCTCCA---------A--ATG---AGGA------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 3 I 26
s Echinops_telfairi.JH980293.1                            62856478 57 - 111700974 -TC---CCACAG----A--T-A------GTG-T----GTCTCCA---------A--ATG---ACCA------GA--G---CGTCTGT-T-AAGAG-T-CCATGATGAT
i Echinops_telfairi.JH980293.1                           I 4 C 0
s Eidolon_helvum.AWHC01266696.1                               7227 58 +     19438 -TC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--ATG---A---GGA---GA--C---GGTCTGT-TTAAGGG-C-TCATGATGAT
i Eidolon_helvum.AWHC01266696.1                          I 6 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240699 58 -    607251 -TC---TCTCTG----A--T-G------GTA-C----ATCTCCA---------A--ATG---A---GGA---GA--G---AGTGTTT-TTAAGGG-T-ACATGATGAT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226711 57 +  10337057 -TC---TCACAG----A--T-A------GTA-T----ATCTCCA---------A--ATG---AGGA------TA--G---AGCCTGT-T-AAGGG-C-ACATAATGGT
i Elephantulus_edwardii.JH947257.1                       I 4 C 0
s Ellobius_lutescens.LOEQ01008920.1                          32131 28 +    110024 -------CACAG----T--T-A------TTTCT----GTCTTCT---------A--ATG---GAGA------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 249 I 21
s Ellobius_talpinus.LOJH01026522.1                           14099 28 +     18970 -------CATAG----T--T-A------TTTCT----GTCTTCT---------A--ATG---GAGA------------------------------------------
i Ellobius_talpinus.LOJH01026522.1                       I 246 I 21
s Enhydra_lutris.KZ291758.1                               24917065 32 +  41312741 -tt---tcacag----a--T-A------GTA-C----ATCTCCA---------A--ATGAGAA---------AA----------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 24
s Eptesicus_fuscus.JH977646.1                             12579845 33 +  14770903 -TC---TCACAG----G--C-A------ATA-C----TTCTCTA---------A--GTG---A---GGAGA-G-----------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 25
s Equus_asinus.JREZ01000139.1                              3042361 59 -   4378816 -TC---TCACAG----G--T-A------GCA-C----GTCTCCA---------A--AGGAGGA---------GA--G---AGCCTGCATTCAGGG-C-CCATAATGAT
i Equus_asinus.JREZ01000139.1                            I 2 C 0
s Equus_caballus.CM000403.2                               21376299 59 +  39960074 -TC---TCACAG----A--T-A------GCA-T----GTCTCCA---------A--AGGAGGA---------GA--G---AGCCTGCATTAAGGG-C-CCATAATGAT
i Equus_caballus.CM000403.2                              I 2 C 0
s Equus_przewalskii.KK951119.1                              412281 59 -    498745 -TC---TCACAG----A--T-A------GCA-T----GTCTCCA---------A--AGGAGGA---------GA--G---AGCCTGCATTAAGGG-C-CCATAATGAT
i Equus_przewalskii.KK951119.1                           I 2 C 0
s Erinaceus_europaeus.JH835339.1                           3666979 45 +   7059049 ------------------------------A-T----ATCTCCA---------A--ATG---A-----A---GAAAG---AGACTAT-TTATGGC-A-CCATGGTAAT
i Erinaceus_europaeus.JH835339.1                         I 1 C 0
s Erythrocebus_patas.Contig38                               264130 58 +  21539334 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Erythrocebus_patas.Contig38                            I 3 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72083 57 -    133382 -TC---TCACAG----A--T-A------GTA-C----AT-TCCA---------C--ATG---A---GGA---GA--G---AGCATGT-TTAAGGG-C-CCATGATAAT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              670 57 -      1072 -TC---TCACAG----A--T-A------GTA-C----AT-TCCA---------C--ATG---A---GGA---GA--G---AGCATGT-TTAAGGG-C-CCATGATAAT
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15735 60 -     24895 TAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Eulemur_albifrons.k141_51491                           I 3 C 0
s Eulemur_collaris.k141_601111                               43445 60 -     70999 TAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Eulemur_collaris.k141_601111                           I 3 C 0
s Eulemur_coronatus.k141_384460                              87415 60 +    112731 TAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Eulemur_coronatus.k141_384460                          I 3 C 0
s Eulemur_flavifrons.k141_433119                             43977 60 +     68309 TAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------GA--G---AGCTTGT-TGGAGAG-T-CCATCATGAC
i Eulemur_flavifrons.k141_433119                         I 3 C 0
s Eulemur_fulvus.k141_636316                                 54302 60 -     65740 TAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Eulemur_fulvus.k141_636316                             I 3 C 0
s Eulemur_macaco.k141_1562045                                24934 60 -     75513 TAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------GA--G---AGCTTGT-TGGAGAG-T-CCATCATGAC
i Eulemur_macaco.k141_1562045                            I 3 C 0
s Eulemur_mongoz.k141_232305                                 49129 60 -     97555 TAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Eulemur_mongoz.k141_232305                             I 3 C 0
s Eulemur_rubriventer.k141_1423786                            5853 60 +     30972 TAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------GA--G---AGCTTGT-TGGAGAG-T-CCATGATAAC
i Eulemur_rubriventer.k141_1423786                       I 3 C 0
s Eulemur_rufus.k141_514691                                  43573 60 -     52037 TAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Eulemur_rufus.k141_514691                              I 3 C 0
s Eulemur_sanfordi.k141_1122526                              59976 60 -    111500 TAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Eulemur_sanfordi.k141_1122526                          I 3 C 0
s Felis_catus.CM001381.2                                 186247779 57 - 206538554 -TC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--CTGAGAG---------GA--A---ACCCTGT-TTAAGGG-T-CCA-GATTAT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117565 57 - 205367284 -TC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--CTGAGAG---------GA--A---ACCCTGT-TTAAGGG-T-CCA-GATTAT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28662 57 -     30238 -TC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--CTGAGAG---------GA--A---ACCCTGT-TTAAGGG-T-CCT-GATTAT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922941 30 -   3816255 TTC---TCACAG----A--T-A------TTC-T----GTCTCCA---------A--ATG---AGG-------------------------------------------
i Fukomys_damarensis.KN121974.1                          I 3 I 25
s Galago_moholi.ctg3793                                     126588 38 -    137831 ------------------------------------------CA---------T--GGG---GAGA------GA--G---AGCTTGC-TGGAGAG-T-CCTTGATGAC
i Galago_moholi.ctg3793                                  I 4 C 0
s Galago_senegalensis.k141_991736                            10133 38 +     22493 ------------------------------------------CA---------T--GGG---GAGA------GA--G---AGCTTGC-TGGAGAG-T-CCTTGATGAC
i Galago_senegalensis.k141_991736                        I 4 C 0
s Galagoides_demidoff.k141_561628                            22203 38 -     32986 ------------------------------------------CA---------T--GGG---GAGA------GA--G---AGCTTGT-TGGAGAG-T-CCTTGATGAC
i Galagoides_demidoff.k141_561628                        I 4 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2115 65 -     28519 CTC---TCACAG----G--T-AGTACTTGTA-C----CTCTCCA---------G--ATG---AGGA------GA--G---AGCTTGC-TGAAGGG-C-CCACGATGAA
i Galeopterus_variegatus.GalVar_scaffold_51812           I 3 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92406 58 -     95226 -TC---TCTCTG----A--T-G------GTA-C----ATCTCCA---------A--ATG---A---GGA---GA--G---AGTGTGT-TTAAGGG-T-GCATGATGAT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2261 59 -      6791 AAC---TCACAG----G--T-A------GTA-T----ATCTCCA---------A--ATG---AGGAG------A--G---AGCTTGT-TGAAGGG-C-CCATGGTGAT
i Glis_glis.GliGli_scaffold_163929                       I 3 C 0
s Gorilla_beringei.k141_3358147                               6747 58 -      8343 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGA-C-C-ATGATGTT
i Gorilla_beringei.k141_3358147                          I 3 C 0
s Gorilla_gorilla.LT578341.1                                255760 58 - 186649187 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGA-C-C-ATGATGAT
i Gorilla_gorilla.LT578341.1                             I 9 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3330 58 -     78134 AAC---TCACAG----G--T-A------GTA-T----ATCTCCA---------A--ATG---AGGAG------T--G---AGTTTAT-TGAAG-G-C-CCATGCTGAT
i Graphiurus_murinus.GraMur_scaffold_10447               I 3 C 0
s Hapalemur_alaotrensis.k141_330369                          15660 60 -     40692 TAC---TCACAG----G--TAA------GCG-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Hapalemur_alaotrensis.k141_330369                      I 3 C 0
s Hapalemur_gilberti.k141_646465                             37062 60 +     49394 TAC---TCACAG----G--TAA------GCG-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTAT-TGGAGAG-T-CCATGATGAC
i Hapalemur_gilberti.k141_646465                         I 3 C 0
s Hapalemur_griseus.k141_763500                              61930 60 -     66874 TAC---TCACAG----G--TAA------GCG-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTAT-TGGAGAG-T-CCATGATGAC
i Hapalemur_griseus.k141_763500                          I 3 C 0
s Hapalemur_meridionalis.k141_258450                         10804 60 -     42923 TAC---TCACAG----G--TAA------GCG-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Hapalemur_meridionalis.k141_258450                     I 3 C 0
s Hapalemur_occidentalis.k141_578367                         17803 60 -     53142 TAC---TCACAG----G--TAA------GCG-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTAT-TGGAGAG-T-CCATGATGAC
i Hapalemur_occidentalis.k141_578367                     I 3 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31752 57 -    327341 -TC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--ATGAGAG---------GA--A---ACCCTGT-TTAAGCG-C-CCA-GATTAT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10081 58 +     48891 -TC---TCTCTG----A--T-G------GTA-C----ATCTCCA---------A--GTG---A---GGA---GG--G---AGTGTGT-TTAAGGA-T-ACATGACGAT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933357 31 -  22651954 TTC---TCACAG----A--C-A------GTC-T----ATCTCCC---------A--ATG---AGGA------------------------------------------
i Heterocephalus_glaber.JH602082.1                       I 3 I 28
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1196 56 +      8654 -TC---TCTCAG----A--C-A------GTG-T----GTCTCCA---------G--ACG---AGGA------GT--G---AGCCTGC-T-C-GGG-T-CCGTGGTGAC
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 4 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8586 58 -     36432 -TC---TCACAG----A--T-A------GTA-C----ATCTCCC---------A--ATG---A---GGA---GA--G---AGCGTGT-TTAAGGG-T-CCATGATGAT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552567 58 -   1711038 -TC---TTGCAG----A--C-A------GCA-C----ATCTCCA---------A--ATG---A---GGA---GA--G---AGCCTGT-TTAAGGG-C-CCATGATGAT
i Hipposideros_armiger.JXIK01000431.1                    I 6 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2006 58 -      2730 -TC---TTGCAG----A--C-A------GCA-C----ATCTCCA---------A--ATG---A---GGA---GA--G---AGCCTGT-TGAAGGG-C-CCATGATGAT
i Hipposideros_galeritus.HipGal_scaffold_164997          I 6 C 0
s Hoolock_leuconedys.ctg274                                    143771 58 -    630532 TTC---TCACAG----A--C-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGAA-C-C-ATGATGAT
i Hoolock_leuconedys.ctg274                                 I 3 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71146 57 +     83186 -TC---TCACAG----A--T-C------GTA-C----ATCTCTA---------A--ATGAGAG---------GA--A---ACCCTGT-TTAAGGG-C-TCA-GATTAT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72767 58 +    143317 TTC---TCACAG----G--T-A------GTC-T----AGCTCCA---------A--ACA---AGGAG------A--G---A-TGTGT-AGAAGGG-C-TTATGTTGAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3 C 0
s Hylobates_agilis.k141_1155965                               6805 58 +     12352 TTC---TCACAG----A--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGAA-C-C-ATGATGAT
i Hylobates_agilis.k141_1155965                          I 3 C 0
s Hylobates_klossii.k141_738755                              13989 58 +     55766 TTC---TCACAG----A--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGAA-C-C-ATGATGAT
i Hylobates_klossii.k141_738755                          I 3 C 0
s Hylobates_pileatus_b.LG02                                       2053589 58 + 191637585 TTC---TCACAG----A--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGAA-T-C-ATGATGAT
i Hylobates_pileatus_b.LG02                                     I 3 C 0
s Hylobates_pileatus_a.tarseq_633                            7802467 58 +  11177569 TTC---TCACAG----A--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGAA-T-C-ATGATGAT
i Hylobates_pileatus_a.tarseq_633                          I 3 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8101 57 -    135385 TTC---TCACAG----A--T-A------GTC-T----ATCTCCA---------G--ATG---AGGA-------A--G---AGTATGT-TGAAG-G-C-TTGTGTTGAT
i Hystrix_cristata.HysCri_scaffold_5660                  I 3 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387803 58 +   7955117 T-C---CCACAG----A--T-A------GAA-T----ATTTCCA---------G--ATG---AGGC--A----A--A---AGCTTGT-TGAAGGG-C-CCATGATGAC
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Indri_indri.k141_2415743                                    3364 60 +     11955 CAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Indri_indri.k141_2415743                               I 3 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               10978 57 -     16823 -TC---TCACAG----A--T-A------GTA-C----AT-TCAA---------C--ATG---A---GGA---GA--G---AACATGT-TTAAGGG-C-CCATGATAAT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241044 30 +   9596543 TTG---CCCCAG----A--T-G------GCA-T----AACATCA---------AGGAGG------A------------------------------------------
i Jaculus_jaculus.JH725527.1                             I 3 I 24
s Kogia_breviceps.KogBre_flattened_line_3970                 72818 57 -     97402 -TC---TCACAG----A--T-A------GCA-C----AT-TCCA---------C--ATG---A---GGA---GA--G---AGCAAGT-TTAAGGA-C-CCATGATAAT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44208 58 +    110728 TTC---TCACAG----A--T-A------GCA-A----GTTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-TGAAGGG-C-C-ATGATGGT
i Lagothrix_lagothricha.k141_246028                      I 3 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64176 47 -     65777 -TC---TCACAG----A--C-A------GTT-C----TTCTCTA---------A--ATG---A---GGAGA-GA--G---AGCCCGG-TTAAG---------------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760457 60 +  30322482 TAC---TCACAG----G--TAA------GCG-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Lemur_catta.scaffold_24                                I 3 C 0
s Leontocebus_fuscicollis.k141_2994775                        5115 58 -     13097 TTC---TCACAG----G--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-GGAAGGG-C-C-AGGATGAT
i Leontocebus_fuscicollis.k141_2994775                   I 3 C 0
s Leontocebus_illigeri.k141_2951200                           4869 58 +      5940 TTC---TCACAG----G--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-GGAAGGG-C-C-AGGATGAT
i Leontocebus_illigeri.k141_2951200                      I 3 C 0
s Leontocebus_nigricollis.k141_3905062                        4692 58 -      5717 TTC---TCACAG----G--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-GGAAGGG-C-C-AGGATGAT
i Leontocebus_nigricollis.k141_3905062                   I 3 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11078 58 -     11567 TTC---TCACAG----G--T-G------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-CGAAGGG-C-C-AGGATGAT
i Leontopithecus_chrysomelas.k141_1327670                I 3 C 0
s Leontopithecus_rosalia.k141_349454                         12459 58 -     12945 TTC---TCACAG----G--T-G------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGT-CGAAGGG-C-C-AGGATGAT
i Leontopithecus_rosalia.k141_349454                     I 3 C 0
s Lepilemur_ankaranensis.k141_567626                          9969 60 +     29618 CGC---TCACAG----G--TAA------GCA-T----ATCTCCA---------A--ATC---AGGC------AA--G---TGCTTGT-TGGAAAG-T-CCATGATGAC
i Lepilemur_ankaranensis.k141_567626                     I 3 C 0
s Lepilemur_dorsalis.k141_387009                              9965 60 +     31569 CGC---TCACAG----G--TAA------GCA-T----ATCTCCA---------A--ATG---AGGC------AA--G---TGCTTGT-TGGAAAG-T-CCATGATGAC
i Lepilemur_dorsalis.k141_387009                         I 3 C 0
s Lepilemur_ruficaudatus.k141_330196                          9975 60 +     24756 CGC---TCACAG----A--TAA------GTA-T----ATCTCCA---------A--ATG---AGGC------AA--G---TGCTTGT-TGGAAAG-T-CCATGATGAC
i Lepilemur_ruficaudatus.k141_330196                     I 3 C 0
s Lepilemur_septentrionalis.k141_360456                       9975 60 +     16388 CGC---TCACAG----G--TAA------GCA-T----ATCTCCA---------A--ATG---AGGC------AA--G---TGCTTGT-TGGAAAG-T-CCATGATGAC
i Lepilemur_septentrionalis.k141_360456                  I 3 C 0
s Leptonychotes_weddellii.KB714746.1                        814458 57 -   3914936 -tc---tcacAG----A--T-A------GTA-T----ATCTCCA---------A--ATGAGAA---------GA--A---ACCCTGG-TTAAGGG-C-CCA-GATTAT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     18820 50 +     24238 TCT---TCATAG----A--C-A------GTG-T----ATcttgg---------a--a------act------ca--t---gact-------agag-c-ctagggagat
i Lepus_americanus.LepAme_scaffold_56121                 I 3 I 291
s Lipotes_vexillifer.KE559953.1                             342163 57 +    662738 -tc---tcacAG----A--T-A------GTA-C----AT-TCCA---------C--ATG---A---GGA---GA--G---AGCATGT-TTAAGGG-C-CCATGATAAT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335125 58 -   1826925 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Lophocebus_aterrimus.ctg367                            I 3 C 0
s Loris_lydekkerianus.k141_2031736                           12286 38 +     19643 ------------------------------------------CA---------T--GGG---GAGA------GA--G---AGCATGT-TGGAAAG-T-CCTTGATGTC
i Loris_lydekkerianus.k141_2031736                       I 4 C 0
s Loris_tardigradus.ctg83                                  5045956 38 -   6120653 ------------------------------------------CA---------T--GGG---GAGA------GA--G---AGCATGT-TGGAAAG-T-CCTTGATGTC
i Loris_tardigradus.ctg83                                I 4 C 0
s Loxodonta_africana.GL010049.1                           39085864 57 +  43346337 -TC---TCACAG----A--T-A------GTG-T----ATCTCCA---------A--ATG---AGGA------GA--G---CGCCAGT-T-AAACG-T-CCATGATGAT
i Loxodonta_africana.GL010049.1                          I 3 C 0
s Lycaon_pictus.CM007581.1                                41615589 43 +  59628241 --------------------------------C----ATCTCCG---------A--ATGAGAA---------GA--A---ATCCTGT-TTAAGTG-C-CCA-GATTAT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46514 58 -     61512 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Macaca_arctoides.k141_1757516                          I 3 C 0
s Macaca_assamensis.Contig5                                 374176 58 -  60120075 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Macaca_assamensis.Contig5                              I 3 C 0
s Macaca_cyclopis.k119_263443                                26444 58 +     30207 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Macaca_cyclopis.k119_263443                            I 3 C 0
s Macaca_fascicularis.k141_1617581                            1282 58 -      5035 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Macaca_fascicularis.k141_1617581                       I 3 C 0
s Macaca_fuscata.k119_546792                                 26397 58 +     30527 TTC---TCATAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Macaca_fuscata.k119_546792                             I 3 C 0
s Macaca_leonina.k141_321385                                 37573 58 -     50087 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--GTG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Macaca_leonina.k141_321385                             I 3 C 0
s Macaca_maura.k141_1103459                                  47317 58 +     51645 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Macaca_maura.k141_1103459                              I 3 C 0
s Macaca_mulatta.NC_041758.1                                416520 58 - 187317192 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Macaca_mulatta.NC_041758.1                             I 3 C 0
s Macaca_nemestrina.KQ007038.1                              400750 58 +  25927173 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Macaca_nemestrina.KQ007038.1                           I 3 C 0
s Macaca_nigra.k141_2818840                                  49922 58 -     62418 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Macaca_nigra.k141_2818840                              I 3 C 0
s Macaca_radiata.k141_2139468                                 2453 58 +     14901 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Macaca_radiata.k141_2139468                            I 3 C 0
s Macaca_siberu.k141_2185972                                 46394 58 +     59329 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--AGG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Macaca_siberu.k141_2185972                             I 3 C 0
s Macaca_silenus.Contig273                                  272302 58 +    668171 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Macaca_silenus.Contig273                               I 3 C 0
s Macaca_thibetana.k99_45532                                   940 58 -      5049 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Macaca_thibetana.k99_45532                             I 3 C 0
s Macaca_tonkeana.k141_339739                                 4100 58 +     17132 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Macaca_tonkeana.k141_339739                            I 3 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224195 58 -    270270 -TC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--ATG---A---GGA---GA--C---GGTCTGT-TTCAGGG-C-CCATGATGAT
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 6 C 0
s Mandrillus_leucophaeus.scaffold280                        323590 58 +  24302211 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Mandrillus_leucophaeus.scaffold280                     I 3 C 0
s Mandrillus_sphinx.Contig270                               358421 58 -    752769 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Mandrillus_sphinx.Contig270                            I 3 C 0
s Manis_javanica.JSZB01003497.1                             674507 57 -    737560 -TC---TCACAG----G--G-A------GTA-C----ATCTC-A---------A--ATGTGCA---------GA--G---AGCCTGT-TTAAAGA-C-CCACAATGAT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221807 57 +    317179 -TC---TCACAG----A--G-A------GTA-C----ATCTC-A---------A--ATGGGCA---------GA--G---AGCCTGT-TTAAAGA-C-CCACAATGAT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502017 58 +  40650429 T-C---CCACAG----A--T-A------GAA-T----ATTTTCA---------G--ATG---AGGC--A----A--A---AGCTTGT-TGAAGGG-C-CCATGATGAC
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151365 42 +    207569 --------------------------------------TCTCGA---------A--ATG---A---GGA---GA--G---AGCCTGT-TTAAGGA-T-CCGTGATGAT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 15 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27192 33 -     74585 -------------------------------------ATCTCCA---------A--ATGAGAA---------AA--A---ACCCTGT-TTAAGGG-C-----------
i Mellivora_capensis.MelCap_flattened_line_19308         I 15 I 8
s Meriones_unguiculatus.MerUng_scaffold_7390                 51136 22 -    140813 ----------------------------------------------------------------------------G---AACTTGT-----GGG-T-CTCTGATAAT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 22 C 0
s Mesocricetus_auratus.KB708134.1                         17430186 28 +  29670104 -------CACag----t--t-g------cttct----gtctcct---------a--atg---GAGA------------------------------------------
i Mesocricetus_auratus.KB708134.1                        I 58 I 21
s Mesoplodon_bidens.MesBid_scaffold_6114                     88447 57 +     93471 -TC---TCACGG----A--T-A------GTA-C----AT-TCCA---------C--ATG---A---GGA---GA--G---AGCATGT-TTAAGGG-C-CCATGATAAT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11238 60 +     17804 TTC---CCACGG----GTAT-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGCGGT-GGAAGGG-C-C-GTGATGAT
i Mico_argentatus.k141_582562                            I 3 C 0
s Mico_humeralifer.k141_1180625                              11738 60 -     12984 TTC---CCACGG----GTAT-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGCGGT-GGAAGGG-C-C-GTGATGAT
i Mico_humeralifer.k141_1180625                          I 3 C 0
s Mico_schneideri.k141_1877700                                     20054 60 -     26561 TTC---CCACGG----GTAT-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGCGGG-GGAAGGG-C-C-GTGATGAT
i Mico_schneideri.k141_1877700                                 I 3 C 0
s Microcebus_murinus.CM007674.1                           74985807 60 +  93316391 CAC---TTGCAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------GA--G---AGCTTGT-TGGAGAG-T-CCATCATGAC
i Microcebus_murinus.CM007674.1                          I 3 C 0
s Microtus_ochrogaster.CM001695.1                         15963631 21 +  27267610 ----------------------------------------------------------------------------G---AACTTGT-----GGG-T-ATGTGATGA-
i Microtus_ochrogaster.CM001695.1                        I 308 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47665 30 +    145209 -TC---CCGCAG----A--A-G------GTG-T----ATCTCCC---------A--ATG---ATGA------------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                I 4 I 14
s Micronycteris_hirsuta.MicHir_scaffold_2233                186048 23 +    200668 ------------------------------G-CATACATCTGCC---------A--ATG---A---GGA---GA----------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 9 I 24
s Miniopterus_natalensis.LDJU01000034.1                    6364183 58 -   8254450 -GC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--ATG---A-----AGA-GA--G---AGCCTGG-TTCAGGA-C-CCATGATGAT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43090 58 -     48117 -GC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--ATG---A-----AGA-GA--G---AGCCTGG-TTCAGGA-C-CCATGATGAT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23625 58 -     27822 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Miopithecus_ogouensis.k141_1534655                     I 3 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9469 57 +     27589 -TC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--ATGAGAA---------GA--A---ACCCTGG-TTAAGGG-C-CCA-GATTAT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53590 60 -     62432 CAC---TCACAG----G--TAA------GTA-T----ATCTTCA---------A--ATG---AGGC------GA--G---AGCTTGT-TGGAGAG-T-CCATCATGAT
i Mirza_zaza.k141_766280                                 I 3 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360552 57 +    437263 -TC---TCACAG----A--T-A------GTA-C----AT-TCCA---------C--ATC---A---GGA---GA--G---AACATGT-TTAAGGG-C-CCATGATAAT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180276 22 +    366855 --------------------------------AGTACATCTGCA---------A--ATG---A---GG-G--GG----------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 9 I 26
s Moschus_moschiferus.MosMos_scaffold_13123                  26526 58 -     82753 -TC---TCTTTG----A--T-G------GTA-C----ATCTCCA---------A--GTG---A---GGA---GG--G---AGTGTGT-TTAAGGG-T-ACATGATGAT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19485 57 -     63510 -TC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--ATGAGAG---------GA--A---ACCCTGT-TTAAGCG-C-CCA-GATTAT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40130 58 +     47283 -TC---TCACAG----A--C-A------GTA-G----ATCTCTA---------A--ATG---A---GGA---AA--G---AGCCTGA-TGAAGGG-C-CCATGAAGAT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35595242 22 + 120012414 ----------------------------------------------------------------------------G---AACGTGT-----GGG-T-CTATggtaat
i Mus_caroli.LT608237.1                                  I 17 C 0
s Mus_musculus.chr8                                       41688468 22 + 129401213 ----------------------------------------------------------------------------G---AACGTGT-----GGG-T-CTGTGGTGAT
i Mus_musculus.chr8                                      I 17 C 0
s Mus_spretus.CM004101.1                                  39497762 22 + 130317789 ----------------------------------------------------------------------------G---AACGTGT-----GGG-T-CTGTGGTGAT
i Mus_spretus.CM004101.1                                 I 17 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85158 59 -     86153 AAC---TCACAA----T--T-A------CTA-T----GTCTCCA---------G--ATG---AGGAG------A--G---AGTTTGT-TGAAGGG-A-CCACGGTGAT
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 3 C 0
s Mustela_putorius.JH418006.1                             14356086 48 +  14710649 -tt---tcacag----a--T-A------GTA-C----ATCTCCA---------A--ATGAGAA---------AA--A---ACCCTGT-TTAAGGG-C-----------
i Mustela_putorius.JH418006.1                            C 0 I 8
s Myocastor_coypus.MyoCoy_scaffold_15261                     64080 42 +     67721 -------------------------------------ATCTTCA---------A--ATG---AGGA--A----A--G---AGTGTGG-TGA-GGG-C-TTATGTTGAT
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 15 C 0
s Myotis_brandtii.KE162005.1                               9794409 58 +  10118263 -TC---TCACAG----A--C-A------ATA-C----ATCTCTA---------A--ATG---A---GGA---GA--G---AGCTTGG-GTAAGAG-C-CCAGGATGAT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388583 58 +   6019432 -TC---TCACAG----A--C-A------ATA-C----ATCTCTA---------A--ATG---A---GGA---GA--G---AGCTTGG-TTAAGAG-C-CCAGGATGAT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384369 58 +   4330536 -TC---TCACAG----A--C-A------ATA-C----ATCTCTA---------A--ATG---A---GGA---GA--G---AGCTTGG-TTAAGAG-C-CCAGGATGAT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3404 58 +     18357 -TC---TCACAG----A--C-A------ATA-C----ATCTCTA---------A--ATG---A---GGA---GA--G---AGCTTGG-TTAAGAG-C-CCAGGATGAT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120745 58 +    130748 -TC---TCACAG----A--T-A------CTG-T----GTCTCCA---------A--ATG---AATA------GA--G---AGCCTGT-TCAAAAG-T-CCATGACGAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 4 C 0
s Nannospalax_galili.KL204047.1                             947681 31 +   3037898 TAG---TCACAG----A--T-G------GTG-C----ATCTTCA---------A--ATG---AGGA------------------------------------------
i Nannospalax_galili.KL204047.1                          I 3 I 26
s Nasalis_larvatus.k141_1350636                              30281 58 +     34575 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGCAGGG-C-C-ATGATGAT
i Nasalis_larvatus.k141_1350636                          I 3 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233218 57 -   7148211 -tc---tcacAG----A--T-A------GTA-C----AT-TCCA---------C--ATC---A---GGA---GA--G---AGCAAGT-TTAAGGG-C-CCATGATAAT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nomascus_annamensis.k141_1771965                           54697 58 -    132029 TTC---TCACAG----A--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGAA-C-C-ATGATGAT
i Nomascus_annamensis.k141_1771965                       I 3 C 0
s Nomascus_concolor.k141_735679                              10792 58 -     16345 TTC---TCACAG----A--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGAA-C-C-ATGATGAT
i Nomascus_concolor.k141_735679                          I 3 C 0
s Nomascus_gabriellae.k141_57920                             16677 58 +     22201 TTC---TCACAG----A--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGAA-C-C-ATGATGAT
i Nomascus_gabriellae.k141_57920                         I 3 C 0
s Nomascus_siki_b.tarseq_93                            8414898 58 -  22158432 TTC---TCACAG----A--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGAA-C-C-ATGATGAT
i Nomascus_siki_b.tarseq_93                          I 3 C 0
s Nomascus_siki_a.k141_941534                                  27075 58 -     54323 TTC---TCACAG----A--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGAA-C-C-ATGATGAT
i Nomascus_siki_a.k141_941534                              I 3 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199185 43 +   9404916 --------------------------------C----ATCTCCG---------A--ATGAGAA---------GA--A---ATCCTGT-TTAAGTG-C-CCA-GATTAT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639183 38 + 196305487 ------------------------------------------CT---------T--GGG---GAGA------GA--G---AGCTTGT-TGGAGAG-T-CCTTGATGAT
i Nycticebus_bengalensis.LG01                            I 4 C 0
s Nycticebus_coucang.k141_1296080                             1786 38 -      9413 ------------------------------------------CT---------T--GGG---GAGA------GA--G---AGCTTGT-TGGAGAG-T-CCTTGATGAT
i Nycticebus_coucang.k141_1296080                        I 4 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566566 38 - 199412804 ------------------------------------------CT---------T--GGG---GAGA------GA--G---AGCTTGT-TGGAGAG-T-CCTTGATGAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 4 C 0
s Ochotona_princeps.JH802162.1                             2557891 24 -   3988456 ---------------------------------------------------------------------------------CCTTCT-TGAAGGG-C-CTATGATGAT
i Ochotona_princeps.JH802162.1                           I 30 C 0
s Octodon_degus.JH651603.1                                11056181 43 -  11899542 -------------------------------------ATCTCCA---------A--GTG---AGGAG------A--G---AGTGTGG-TGAAGGG-C-TTATGTTGAT
i Octodon_degus.JH651603.1                               I 15 C 0
s Odobenus_rosmarus.KB229312.1                             1452888 57 +   2017862 -tc---tcacGG----A--T-A------GTA-C----ATCTCCA---------A--ATGAGAA---------GA--A---ACCCTGG-TTAAGGG-C-CCA-GATTAT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437295 58 -    630418 -TC---CCTCTG----A--T-G------GTA-C----ATCTCCA---------A--ATG---A---GGA---GA--G---AGTGTTT-TTAAGGG-T-ACATGATGAT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15490 58 +    150152 -TC---TCTCTG----A--T-G------GTA-C----ATCTCCA---------A--ATG---A---GGA---GA--G---AGTGTGT-TTAAGGG-T-GCATGATGAA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93926 28 -    140218 -------CACAG----T--T-A------TTTCT----GTCTTCT---------A--ATG---GAGA------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                I 248 I 10
s Onychomys_torridus.OnyTor_scaffold_28377                    4345 28 -     41509 -------CACAG----T--T-A------TTTCT----GTCTTCT---------A--ATG---GAGA------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_28377               I 6 I 21
s Orcinus_orca.KB316932.1                                  8103620 57 +  10937097 -tc---tcacAG----A--T-A------GTA-C----AT-TCCA---------C--ATC---A---GGA---GA--G---AGCATTT-TTTTGGG-C-CCATGATAAT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                647 57 +     11607 -TT---TCACAG----A--T-A------GTG-T----ATCTCCA---------A--ATG---AGGA------GC--G---AGCTTGT-T-AAAGG-T-CTATGATGAT
i Orycteropus_afer.OryAfe_flattened_line_201229          I 3 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104616 56 - 174332312 TCT---TCATAG----A--C-A------GTG-T----ATCTCCA---------A--A------GGA------GA--C---GGCTTGT-TGAAGAG-C-CCATGATGAT
i Oryctolagus_cuniculus.CM000791.1                       I 3 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40228 43 +    559221 --------------------------------C----ATCTCCG---------A--ATGAGAA---------GA--A---ATCCTGT-TTAAGTG-C-CCA-GATTAT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41735 38 -     51505 ------------------------------------------CA---------T--GGG---GAGA------GA--G---AGCTTGT-TGGAGAG-T-CCTTGATGAC
i Otolemur_crassicaudatus.k141_649260                    I 4 C 0
s Otolemur_garnettii.GL873799.1                             354739 38 +   1103335 ------------------------------------------CA---------T--GGG---GAGA------GA--G---AGCTTGT-TGGAGAG-T-CCTTGATGAC
i Otolemur_garnettii.GL873799.1                          I 4 C 0
s Ovis_aries.CM001607.2                                   26405201 58 -  44047080 -tc---tctctg----a--t-g------GTA-C----ATCTCCA---------A--GTG---A---GGA---GG--G---AGTGTGT-TTAAGGA-T-ACATGACGAT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5720 58 +     17875 -TC---TCTCTG----A--T-G------GTA-C----ATCTCCA---------A--GTG---A---GGA---GG--G---AGTGTGT-TTAAGGA-T-ACATGACGAT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.KZ622849.1                                 34474 58 -    110857 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGA-C-C-ATGATGAT
i Pan_troglodytes.KZ622849.1                             I 192 I 47
s Panthera_onca.PanOnc_flattened_line_3271                   25485 57 -    230217 -TC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--CTGAGAG---------GA--A---ACCCTGT-TTAAGGG-T-CCA-GATTAT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462811 57 -  18783137 -TC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--CTGAGAG---------GA--A---ACCCTGT-TTAAGGG-T-CCA-GATTAT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973470 57 +   8748460 -TC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--CTGAGAG---------GA--A---ACCCTGT-TTAAGGG-T-CTA-GATTAT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616729 58 +   2937107 -tc---tctctg----a--t-g------GTA-C----ATCTCCA---------A--GTG---A---GGA---GG--G---AGTGTGT-TTAAGGG-T-ACATGATGAT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244599 58 - 183742232 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Papio_anubis.CM001495.2                                I 3 C 0
s Papio_cynocephalus.k141_1507553                            10884 58 +     21308 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Papio_cynocephalus.k141_1507553                        I 3 C 0
s Papio_hamadryas.Contig39                                  293627 58 -  20919399 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Papio_hamadryas.Contig39                               I 3 C 0
s Papio_kindae.k141_2214839                                  23532 58 -     27687 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Papio_kindae.k141_2214839                              I 3 C 0
s Papio_papio.k141_3538738                                     203 58 +     10553 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Papio_papio.k141_3538738                               I 3 C 0
s Papio_ursinus.k141_5784434                                   163 58 -     10386 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Papio_ursinus.k141_5784434                             I 3 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16066 57 +     78924 -TC---TCACAG----A--T-A------GGA-C----ATCTCTA---------A--ATGAGAG---------GA--A---ACCGTGT-TTAAGGG-C-CCA-GATTAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28066 38 +     31479 ------------------------------------------AA---------A--GGG---GAGA------GA--G---AGCTTGA-TGGAGAG-T-CCTTGATGAC
i Perodicticus_ibeanus.k141_1921260                      I 4 C 0
s Perodicticus_potto.k141_1854441                            20434 38 -     24908 ------------------------------------------AA---------A--GGG---GAGA------GA--G---AGCTTGA-TGGAGAG-T-CCTTGATGAC
i Perodicticus_potto.k141_1854441                        I 4 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2902 26 +      9367 ----------------------------------------------------------------------------G---AATTAGT-TGAAGGG-C-TTTAGGTGAT
i Perognathus_longimembris.PerPac_flattened_line_89005   I 32 C 0
s Peromyscus_maniculatus.KI615324.1                         247555 28 +  18517816 -------CAcag----t--t-a------ttttt----atcttct---------a--atg---GAGA------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      I 6 I 21
s Petromus_typicus.PetTyp_scaffold_17301                     32915 59 -     56120 TTC---TCTCAG----A--T-A------GTC-C----ATCTCCA---------A--ATA---GGGA--A----A--G---AGCGTGT-TGAAGGG-A-TTATGCTGAT
i Petromus_typicus.PetTyp_scaffold_17301                 I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5146 57 -     63832 -TC---TCACAG----A--T-A------GTA-C----AT-TCCA---------C--ATC---A---GGA---GA--G---AGCATGT-TTAAGGG-C-CCATGATAAT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3712 58 +     55023 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATA---AGGG------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Piliocolobus_badius.k141_2704958                       I 3 C 0
s Piliocolobus_gordonorum.k141_381342                         3250 58 -     89929 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATA---AGGG------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Piliocolobus_gordonorum.k141_381342                    I 3 C 0
s Piliocolobus_kirkii.k141_1310104                            3840 58 +     40849 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATA---AGGG------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Piliocolobus_kirkii.k141_1310104                       I 3 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255515 58 +  14605196 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATA---AGGG------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Piliocolobus_tephrosceles.PDMG02000141.1               I 3 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             4982 33 +     22231 -TC---TCACAG----A--T-A------GTA-T----TTCTCTA---------A--ATG---A---GGA-ATG-----------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 25
s Platanista_gangetica.PlaMin_flattened_line_83166            2163 57 +     19503 -TC---TCACAG----A--T-A------GTA-C----AT-TCCA---------C--ATG---A---GGA---AA--G---AGCATGT-TTAAGGG-C-CCATGATAAT
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Pongo_abelii.CM009266.2                                   178901 58 - 189387572 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGA-C-C-ATGATGAT
i Pongo_abelii.CM009266.2                                I 3 C 0
s Pongo_pygmaeus.ctg66                                      193718 58 -   9816681 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGA-C-C-ATGATGAT
i Pongo_pygmaeus.ctg66                                   I 3 C 0
s Presbytis_comata.k141_1230337                              28860 58 +     69807 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Presbytis_comata.k141_1230337                          I 3 C 0
s Presbytis_mitrata.k141_584736                              46041 58 -     80239 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Presbytis_mitrata.k141_584736                          I 3 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5187 56 +      7663 -TC---TCCCAG----A--C-A------GTG-T----GTCTCCA---------G--ACG---AGGA------GT--G---AGCCTGC-T-C-GGG-T-CCGTGGTGAT
i Procavia_capensis.ProCapCap_scaffold_165387            I 4 C 0
s Prolemur_simus.MPIZ01000396.1                            1983605 60 +   4620579 TAC---TCACAG----G--TAA------GCG-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTGT-TGGAGAG-T-CCAGGATGAC
i Prolemur_simus.MPIZ01000396.1                          I 3 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567115 60 -   2598838 CAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Propithecus_coquerelli.NW_012148875.1                  I 3 C 0
s Propithecus_coronatus.k141_209299                           4753 60 -      7103 CAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Propithecus_coronatus.k141_209299                      I 3 C 0
s Propithecus_diadema.k141_153680                             5350 60 -     11706 CAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Propithecus_diadema.k141_153680                        I 3 C 0
s Propithecus_edwardsi.k141_635656                            9087 60 -     30655 CAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Propithecus_edwardsi.k141_635656                       I 3 C 0
s Propithecus_perrieri.k141_1496898                          35401 60 +     46564 CAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Propithecus_perrieri.k141_1496898                      I 3 C 0
s Propithecus_tattersalli.k141_1127767                       95680 60 -     98465 CAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Propithecus_tattersalli.k141_1127767                   I 3 C 0
s Propithecus_verreauxi.k141_1047036                          9319 60 +     35169 CAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGT------GA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Propithecus_verreauxi.k141_1047036                     I 3 C 0
s Psammomys_obesus.NESX01036366.1                            38650 22 +     52041 ----------------------------------------------------------------------------G---AACTTGT-----GGG-T-CTTtgataat
i Psammomys_obesus.NESX01036366.1                        I 22 C 0
s Pteronotus_parnellii.KE847780.1                            53169 23 -     66298 ------------------------------g-TGTACATCTCCA---------A--ATG---A---GGA---GA----------------------------------
i Pteronotus_parnellii.KE847780.1                        I 9 I 26
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5660 48 -     18639 -TT---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--ATGAGAA---------AA--A---ACCCTGT-TTAAGGG-C-----------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 8
s Pteropus_alecto.KB030862.1                               5841767 58 -  28871421 -TC---TCACAG----A--T-A------GTA-C----ATCTTCG---------A--ATG---A---GGA---GA--C---GGTCTGT-TTAAGGG-C-CCATGATGAT
i Pteropus_alecto.KB030862.1                             I 6 C 0
s Pteropus_vampyrus.KN525825.1                             3538282 58 -   4952924 -TC---TCACAG----A--T-A------GTA-C----ATCTTCG---------A--ATG---A---GGA---GA--C---GGTCTGT-TTAAGGG-C-CCATGATGAT
i Pteropus_vampyrus.KN525825.1                           I 6 C 0
s Puma_concolor.QAVW01001104.1                            18100128 57 +  38429054 -TC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--CTGAGAG---------GA--A---ACCCTGT-TTAAGGG-T-CCA-GATTAT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28230 55 +     91421 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C----ATGAT
i Pygathrix_cinerea.k141_1153803                         I 3 C 0
s Pygathrix_nigripes_b.ctg100                                  154714 55 -   7812017 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C----ATGAT
i Pygathrix_nigripes_b.ctg100                               I 3 C 0
s Pygathrix_nigripes_a.k141_215492                              9087 55 +     72585 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C----ATGAT
i Pygathrix_nigripes_a.k141_215492                         I 3 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54209 58 +     55069 -TC---CCTCTG----A--T-G------GTA-C----ATCTCCA---------A--ATG---A---GGA---GA--G---AGTGTTT-TTAAGGG-T-ACATGATGAT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023935 22 -  90668790 ----------------------------------------------------------------------------G---AATGCAT-----CGG-T-CTGTGgtaat
i Rattus_norvegicus.chr16                                I 26 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915762 28 +   3329780 ------------------------------------------------------------------------GA--G---GGATTGT-TTAAGGG-C-CCATGTTGAT
i Rhinolophus_sinicus.LVEH01000134.1                     I 25 C 0
s Rhinopithecus_bieti.k119_778604                             2814 58 +      7119 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-GTGATGAT
i Rhinopithecus_bieti.k119_778604                        I 3 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123429 58 + 195417433 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-GTGATGAC
i Rhinopithecus_roxellana.NC_044550.1                    I 3 C 0
s Rhinopithecus_strykeri.ctg102                             237656 58 -   7961872 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-GTGATGAT
i Rhinopithecus_strykeri.ctg102                          I 3 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76266 58 -    116970 -TC---TCACAG----A--T-A------CTA-C----ATCTCCA---------A--ATG---A---GGA---GA--C---GGTCTGT-TTAAGGG-C-CCATGATGAT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 6 C 0
s Saguinus_bicolor.k141_1429097                               4990 58 +     27962 TTC---TCACAG----G--T-A------GCA-G----GTTTCCA---------A--ATG---AGGA------CA--G---AGTTGGT-GGAAGGG-C-C-AGGACGAT
i Saguinus_bicolor.k141_1429097                          I 3 C 0
s Saguinus_geoffroyi.k141_3779887                             4881 58 +      6077 TTC---TCACAG----G--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGC-AGAAGGG-C-C-AGGGCAAT
i Saguinus_geoffroyi.k141_3779887                        I 3 C 0
s Saguinus_imperator.k141_1898058                             4974 58 +      5971 TTC---TCACAG----G--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGC-GGAAGGG-C-C-AGGACGAT
i Saguinus_imperator.k141_1898058                        I 3 C 0
s Saguinus_inustus.k141_2469308                               4892 58 +      5932 TTC---TCACAG----G--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGC-GGAGGGG-C-C-AGGACGAT
i Saguinus_inustus.k141_2469308                          I 3 C 0
s Saguinus_labiatus.k141_2380921                              3237 58 -      4390 TTC---TCACAG----G--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGC-GGAAGGG-C-C-AGGACGAT
i Saguinus_labiatus.k141_2380921                         I 3 C 0
s Saguinus_midas.LG03                                       392674 58 - 209938924 TTC---TCACAG----G--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------CA--G---AGTTGGT-GGAAGGG-C-C-AGGACGAT
i Saguinus_midas.LG03                                    I 3 C 0
s Saguinus_mystax.k141_8077960                                4840 58 +      5979 TTC---TCACAG----G--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGC-GGAAGGG-C-C-AGGACGAT
i Saguinus_mystax.k141_8077960                           I 1 C 0
s Saguinus_oedipus.k141_1280589                               1410 58 -     22275 TTC---TCACAG----G--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGGTGGC-AGAAGGG-C-C-AGGGCAAT
i Saguinus_oedipus.k141_1280589                          I 3 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8888 58 +     16473 -TC---TCTCTG----A--T-G------GTA-C----ATCTCCA---------A--GTG---A---GGA---GG--G---AATGTGT-TTAAGGG-T-ACATGATGAT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110006 58 + 121099817 ttc---tcacaG----A--T-A------GCA-A----ATTTCCA---------A--ACA---AGGA------CA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Saimiri_boliviensis.NW_024100920.1                     I 3 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31573 58 -     47369 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ACA---AGGA------CA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Saimiri_cassiquiarensis.k141_1467335                   I 3 C 0
s Saimiri_macrodon.k141_1173117                              31959 58 -     79414 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ACA---AGGA------CA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Saimiri_macrodon.k141_1173117                          I 3 C 0
s Saimiri_oerstedii.k141_245838                              28650 58 -     34454 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------T--ACA---AGGA------CA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Saimiri_oerstedii.k141_245838                          I 3 C 0
s Saimiri_sciureus.k141_1467173                              16051 58 -     22428 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ACA---AGGA------CA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Saimiri_sciureus.k141_1467173                          I 3 C 0
s Saimiri_ustus.k141_360372                                  31205 58 -     47109 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ACA---AGGA------CA--G---AGGTGGT-TGAAGGG-C-C-ATGATGAT
i Saimiri_ustus.k141_360372                              I 3 C 0
s Sapajus_apella.ctg103                                     239256 58 +   5703754 TTC---TAACAG----A--T-A------GCA-A----ATTTCCA---------G--GTG---AGGA------CA--G---AGGTGGC-TGAAGGG-C-C-ATGATGAT
i Sapajus_apella.ctg103                                  I 3 C 0
s Sapajus_macrocephalus.k141_796559                           8846 58 +     21866 TTC---TAACAG----A--T-A------GCA-A----ATTTCCA---------G--GTG---AGGA------CA--G---AGGTGGC-TGAAGGG-C-C-ATGATGAT
i Sapajus_macrocephalus.k141_796559                      I 3 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116896 29 +    313613 -TC---TCACAG----A--T-G------GCG-T----AGCTCTA---------A--ATG---A---------GG----------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 I 18
s Semnopithecus_entellus.k141_158471                         26556 58 +     27374 TTC---TCACAG----A--T-A------GCA-A----ATTCCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Semnopithecus_entellus.k141_158471                     I 3 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30068 58 +     58920 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Semnopithecus_hypoleucos.k141_1910531                  I 3 C 0
s Semnopithecus_johnii.k141_843753                           16566 58 -     45317 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Semnopithecus_johnii.k141_843753                       I 3 C 0
s Semnopithecus_priam.k141_714795                            24224 58 -     42441 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Semnopithecus_priam.k141_714795                        I 3 C 0
s Semnopithecus_schistaceus.k141_1432920                     26902 58 -     29113 TTC---TCACAG----A--T-A------GCA-A----ATTCCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Semnopithecus_schistaceus.k141_1432920                 I 3 C 0
s Semnopithecus_vetulus.k141_244474                          29977 58 -     48123 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Semnopithecus_vetulus.k141_244474                      I 3 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49928 28 +     77746 -------CACAG----T--T-A------TTTCT----ATCTTCT---------A--ATG---GAGA------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                I 6 I 20
s Solenodon_paradoxus.SolPar_flattened_line_126            1865172 56 -   1910179 -TC---TCATAT----A--T-C------GTA-T----ATCTCCA---------A--ATG---A---------CA--G---AGCCTGT-TTAAAGT-GTACATAATGGT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672271 33 +  18376816 --------------------------------T----ATCCTCA---------A--ATG---A---------GGAGAAAGGGTCAGT-CTATG---------------
i Sorex_araneus.JH798187.1                               I 10 I 5
s Spermophilus_dauricus.KZ294078.1                         1869381 58 +   3870691 T-C---CCACAG----A--T-A------GAA-T----ATTTCCA---------G--ATG---AGGC--A----A--A---AGCTTGT-TGAAGGG-C-CCACGATGAC
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7742 58 -     97271 -CC---TCACAG----A--C-A------GTA-C----ATCTCCA---------A--ATGAGGA---------GA--A---ACCCTGT-TTAAGGGGG-CCA-GATTAT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125902 57 +    196729 -TC---TCACAG----A--T-A------GTA-C----ATCTCCA---------A--ATGAGAG---------GA--A---ACCCTGT-TTAAGCG-C-CCA-GATTAT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6644953 58 +  69701581 -CC---TCACGG----A--T-A------GTA-C----ATCTCCA---------A--ATG---A---GGA---GA--G---AACGAGT-TTAAGCG-C-CCATGATGAT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392157 58 +   1523678 TTC---TCACAG----A--T-A------GCA-G----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGAA-C-C-ATGATGAT
i Symphalangus_syndactylus.tarseq_199                    I 3 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15346 26 +     22964 ----------------------------------------------------------------------------G---AGCCTGG-TGAAGGG-C-CTATGATGAT
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 28 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3736 58 +      5583 -TC---TCACAG----A--T-A------GTG-C----ATCTCCA---------A--ATG---AATA------GA--G---AGCCTGT-TCAAAGG-T-CCATGACGAT
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 4 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192641 42 +    199430 --------------------------------------TCTCCA---------A--ATGAGGA---------GA--G---AGACTGT-CTAAGGG-C-CCATGATGAA
i Tapirus_indicus.TapInd_scaffold_7432                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106609 42 -    539355 --------------------------------------TCTCCA---------A--ATGAGGA---------GA--G---AGACTGT-CTAAGGG-C-CCATGATGAA
i Tapirus_terrestris.TapTer_scaffold_755                 I 2 C 0
s Tarsius_lariang.k141_1733899                                1669 59 +      9917 CTC---TTACAG----A--C-A------GTA-T----AACCCCA---------A--TTG---AGGA------GA--G---AGCTTGT-TGGAGGA-C-CCATAATGAT
i Tarsius_lariang.k141_1733899                           I 3 C 0
s Tarsius_wallacei.k141_226975                                8467 59 +     20590 CTC---TTACAG----A--C-A------GTA-T----AACCCCA---------A--TTG---AGGA------GA--G---AGCTTGT-TGGAGGA-C-CCATAATGAT
i Tarsius_wallacei.k141_226975                           I 3 C 0
s Theropithecus_gelada.CM009954.1                           354408 58 - 186847797 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-C-ATGATGAT
i Theropithecus_gelada.CM009954.1                        I 3 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25072 57 -     33621 TTC---TCACAG----A--C-A------GTC-T----ATCTCCA---------A--AGA---AGT--------A--G---AGTGTGC-TGAAGGG-C-TTATGCTGAT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 3 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20722 58 -     31044 -TC---TCACAC----G--C-A------GTC-AG---GTCTCCC---------A--AAG---AGCA------GA--G---AACCTGT-GCAAGCA-T-CCGTGAC-GT
i Tolypeutes_matacus.TolMat_scaffold_31955               I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481168 23 -    610378 ------------------------------G-CGTACATCTCCA---------G--ATG---G---GGA---GG----------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 I 9 I 26
s Trachypithecus_auratus.k141_1189070                        22101 58 +     26378 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Trachypithecus_auratus.k141_1189070                    I 3 C 0
s Trachypithecus_crepusculus.k141_539312                     34777 58 -     78344 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Trachypithecus_crepusculus.k141_539312                 I 3 C 0
s Trachypithecus_cristatus.k141_180416                       21426 58 +     25722 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Trachypithecus_cristatus.k141_180416                   I 3 C 0
s Trachypithecus_francoisi.k141_1453105                      29733 58 -     62838 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Trachypithecus_francoisi.k141_1453105                  I 3 C 0
s Trachypithecus_geei.k141_1001272                           29777 58 +     46913 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Trachypithecus_geei.k141_1001272                       I 3 C 0
s Trachypithecus_germaini.k141_57262                         10584 58 -     28527 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Trachypithecus_germaini.k141_57262                     I 3 C 0
s Trachypithecus_hatinhensis.k141_31479                      31668 58 -     64340 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Trachypithecus_hatinhensis.k141_31479                  I 3 C 0
s Trachypithecus_laotum.k141_928651                          29706 58 -     63452 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Trachypithecus_laotum.k141_928651                      I 3 C 0
s Trachypithecus_leucocephalus.k141_96450                    11153 58 +     22490 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Trachypithecus_leucocephalus.k141_96450                I 3 C 0
s Trachypithecus_melamera.k141_591572                         4576 58 -      6147 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Trachypithecus_melamera.k141_591572                    I 3 C 0
s Trachypithecus_obscurus.k141_848057                        11489 58 -     13050 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Trachypithecus_obscurus.k141_848057                    I 3 C 0
s Trachypithecus_phayrei.ctg124                             256719 58 -   6242583 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Trachypithecus_phayrei.ctg124                          I 3 C 0
s Trachypithecus_pileatus.k141_2622778                        2747 58 +     19340 TTC---TCACAG----A--T-A------GCA-A----ATTTCCA---------A--ATG---AGGA------GA--G---AGCTGGT-TGAAGGG-C-T-GTGATGAT
i Trachypithecus_pileatus.k141_2622778                   I 3 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174496 58 -    200418 -TC---TCATTA----A--T-A------GTA-C----ATCTCCA---------G--ATG---A---GGA---GA--A---AGTGTGT-TTAAGGG-T-ACATGATGAT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482559 57 -  10818551 -TC---TCACAG----A--T-A------GTA-T----ATCTCCA---------A--ATG---AGGA------GA--G---AGCCTGT-T-AAGGG-T-CCATGATGAT
i Trichechus_manatus.JH594705.1                          I 3 C 0
s Tupaia_chinensis.KB320905.1                              1303501 45 +   3648735 ------------------------------A-T----GTCTCCA---------A--GTG---AAGG------AC--G---AGAGTGC-TGACGGG-C-CCATGATAAC
i Tupaia_chinensis.KB320905.1                            n 54 I 45
s Tupaia_tana.TupTan_flattened_line_394                       9422 45 -     70247 ------------------------------T-T----GTCTCCA---------A--GTG---AAGG------TC--G---AGAGTGC-TGACGGG-C-CCATGACAAT
i Tupaia_tana.TupTan_flattened_line_394                  I 9 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366733 57 -  33153633 -tc---tcacaG----A--T-A------GTA-C----AT-TCCA---------C--ATC---A---GGA---GA--G---AGCATGT-TTAAGGG-C-CCATGATAAT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4609 29 -     21056 -TC---TCATAG----A--T-A------GCC-C----ATCTCCA---------A--ATG---A---------GG----------------------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               I 3 I 24
s Ursus_maritimus.KK499267.1                                183062 57 +   5085361 -tc---tcaCAG----A--C-A------GTA-C----ATCTCCA---------A--ATGAGAA---------GA--A---ACCCTGT-TTAAGGG-C-CCA-GATTAT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26261 60 -     30710 TAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------AA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Varecia_rubra.k141_787544                              I 3 C 0
s Varecia_variegata.k141_289850                              25168 60 -    147434 TAC---TCACAG----G--TAA------GTG-T----ATCTCCA---------A--ATG---AGGC------AA--G---AGCTTGT-TGGAGAG-T-CCATGATGAC
i Varecia_variegata.k141_289850                          I 3 C 0
s Vicugna_pacos.KN270157.1                                   77329 21 +   5488506 ------------------------------------------------------------------------------------TGT-TTAAGGG-C-CCATGATGAT
i Vicugna_pacos.KN270157.1                               I 7 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105951 43 -    112863 --------------------------------C----ATCTCCG---------A--ATGAGAA---------GA--A---ATCCTGT-TTAAGCG-C-CCA-GATTAT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175138 58 -    224448 T-T---CCACAG----A--T-A------TAA-T----ATTTCTA---------G--AAG---AGGAG------A--A---AGCTTGT-TGAAGGG-C-CCATGATAAC
i Xerus_inauris.XerIna_scaffold_2302                     I 3 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30096 57 -     86975 -TC---TCACGG----A--T-A------GTA-C----ATCTCCA---------A--ATGAGAA---------GA--A---ACCCTGG-TTAAGGG-C-CCA-GATTAT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1017 27 -      1899 TTG---CCCTAG----A--T-G------GTG-T----GACCTCA---------A--ATG-------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 8 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            2017 57 +      2126 -TC---TCACAG----A--T-A------GTA-C----AT-TCCA---------C--ATG---A---GGA---GA--G---AGCATGT-TTAAGGG-C-CCATGATAAT
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Plecturocebus_moloch.k141_1031110                          44998  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          43531  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      15615  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          8678  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          43630  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          8679  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     43981  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       43587  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4183  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9101  0 +     39866 C
e Pithecia_vanzolinii.k141_1369553                           32683  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              557669  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           32699  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         32939  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               32663  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          6919  0 -     25401 C
e Pithecia_albicans.k141_1239476                             65827  0 +    207309 C
e Noctilio_leporinus.NocLep_scaffold_7894                   128981  0 -    149072 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Chiropotes_sagulatus.k141_1113111                           9011  0 +     34062 C
e Chiropotes_israelita.k141_313004                           43460  0 -    112038 C
e Chiropotes_albinasus.k141_1946120                           4988  0 +      5346 C
e Cheracebus_torquatus.k141_890198                           20393  0 +     39636 C
e Cheracebus_regulus.k141_471822                             20604  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20349  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                             9936  0 -     32913 C
e Cacajao_melanocephalus.k141_619699                         21562  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  21649  0 +     95584 C
e Cacajao_calvus.k141_89051                                  44123  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   8829  0 +     28062 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6502 21 +     36723 GAGCCAA-TGATAGGTGT---TATT
s Acinonyx_jubatus.LLWD01001279.1                           813926 21 +   1699592 GAGCTAC-TTATGGGTGC---AGTT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26261 21 +     63021 GAGTGAA-TGACAGGTGT---TATT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416383 21 +  29979442 GAGCTAT-TGATGGGTGC---AATT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216722 21 +    347723 GAGCTAT-TGATGGCTGG---AATT
i Ailurus_fulgens.LNAC01001112.1                         I 8 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19569 21 -     61208 TCACTAA-TGGTAGGTGG---TATT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49150 21 +     53615 CAGCCAA-TGATAGGCAT---TATT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1181 21 +     13857 CAGCCAA-TGATAGGCAT---TATT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17732 21 -     21945 CAGCCAA-TGATAGGCAT---TATT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19417 21 +     32033 CAGCCAA-TGATAGGCAT---TATT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73250 21 -     84148 CAGCTAA-TGATAGCCGT---TGTT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45489 21 -     78289 CAGCTAA-TGATAGCCGT---TGTT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44928 21 +     55831 CAGCTAA-TGATAGCCGT---TGTT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43378 21 -     64179 CAGCTAA-TGATAGCCGT---TGTT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            485 21 -      3959 CAGCTAA-TGATAGCCGT---TGTT
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42003 21 +     45454 CAGCTAA-TGATAGCCGT---TGTT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47652 21 +     70886 CAGCTAA-TGATAGCCGT---TGTT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9825 21 +     30854 CAGCTAA-TGATAGCCGT---TGTT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33959 21 +     42133 CAGCTAA-TGATAGCCGT---TGTT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586392 21 +   2318259 GAGTTAA-CAATGGGCAC---AACT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178182 21 -    412891 GAGTTAA-TGGTGGCTGC---AGTT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 26 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51498 21 -     68529 GGGTTAA-TAACAGGCAC---AAGT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2217 21 +     17741 CAGCTAA-TGAGAGCCAT---TGTT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2842 21 -     15923 CAGCTAA-TGAGAGCCGT---TGTT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673124 21 +   5030052 CAGCTAA-TGAGAGCCAT---TGTT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3118 21 -     16391 CAGCTAA-TGAGAGCCGT---TGTT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2677 21 -     17186 CAGCTAA-TGAGAGCCGT---TGTT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17193 21 -     32367 GAGCTAA-GGCTAGGTGC---TATT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21254 21 -     45910 AAGCTAA-TGATGGGCAT---TACT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6448 21 -     15198 GAGCTAA-TGGTGGGCGC---AGTT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 25 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275715 21 +  21539123 CAGCTAA-TGACAGTCGT---TGTT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11883 21 +     48076 CAGCTAA-TGACAGTCGT---TGTT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7018 21 -     28759 CAGCTAA-TGACAGTCGT---TGTT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34572 21 +     44353 CAGCTAA-TGACAGTCGT---TGTT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49943 21 -     71267 CAGCTAA-TGACAGTCGT---TGTT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24001 21 -     33135 CAGCTAA-TGACAGTCGT---TTTT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7281 21 +     11645 GAGCTAA-TGATGGGCGC---TATT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7289 21 -     19611 GAGCTAA-TGATGGGCGC---TATT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964526 21 -  23207421 GAGTTAA-TAATGGGCAC---AAGT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1026 21 -     25979 GAGTTAA-TAATGGGCAC---AAGT
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87399 21 +    124022 GAGTTAA-CAATGGGCAC---AATT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22941 21 +    288883 GAGTTAA-TAATGGGCAC---AAGT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357331 21 +  48749331 GAGTTAA-TAATGGGCAC---AAGT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755895 21 +   1948126 GAATTAA-TAATGGGCAC---AAGT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546037 21 -  45695690 GAGTTAA-TAATGGGCAC---AAGT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531052 21 -   4408762 GAGTTAA-TAATGGGCAC---AAGT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8829  2 +     28062 -----------------------CT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44123  2 -     91139 -----------------------CT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21649  2 +     95584 -----------------------CT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21562  2 +    119600 -----------------------CT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11197 21 +     18648 CAGCTAA-TGAGAGCCAT---TGTC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10713 21 -     13885 CAGCTAA-TGAGAGCCGT---TGTC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2800 21 -      8861 CAGCTAA-TGAGAGCCAT---TGTC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455192 21 + 189096842 CAGCTAA-TGAGAGCCAT---TGTC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2715 21 +      8664 CAGCTAA-TGAGAGCCAT---TGTC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632016 21 +  17673402 GAGTTAA-TGACGGGCAC---AGGT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666303 21 +   7040546 GAGTTAA-TGACGGGCAC---AGGT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209962 21 +   1652518 GAGTTAA-TGACGGGCAC---AGGT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506363 21 +  60362399 GAGCTAT-TGATGGGTGC---AGTT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                     9999 21 -     23171 GAGCTAT-TGATGGGTGC---AGTT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223342 21 +   9314153 GAGCTAT-TGATGGGTGC---AGTT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616477 21 +  59632846 GAGCTAT-TGATGGGTGC---AGTT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108058 21 -  63665305 GAGCTAT-TGATGGGTGC---AGTT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410121 21 -  46296322 GAGTTAA-CAACGGGCAC---AACT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592395 21 +  44709034 GAGTTAA-CAACGGGCAC---AACT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    551 21 -      1607 GAACTAA-GGATAGGTGC---TATT
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271504 21 +    496798 AAACTAA-CTATGGGTGC---TATT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1307 21 +      9923 GAGCTGA-GGGTGGGTAC---AGCT
i Carollia_perspicillata.CarPer_scaffold_107871          I 26 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28688 21 -     39886 GAGCTAA-TGATAGGTGC---TATT
i Castor_canadensis.CasCan_scaffold_39952                I 26 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80591 21 -    217609 TAGTTAA-TAACGGGTAC---AACT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997424 21 +  23392119 GAACTAA-GGATAGGTGC---tatt
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000865 21 +  23407841 GAACTAA-GGATAGGTGc---tatt
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63946 21 -     66877 GAACTAA-GGATAGGTGC---TATT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6112 21 -     12580 CAGCTAA-TGAGAGCCAT---TGTC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44170 21 +     53515 CAGCTAA-TGAGAGCCAT---TGTC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373940 21 -  26074798 CAGCTAA-TGGGAGCCGT---TGTT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                8994 21 -     34880 CAGCTAA-TGGGAGCCGT---TGTT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68090 21 -     89041 CAGCTAA-TGGGAGCCGT---TGTT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3465 21 -      5494 AAACTAA-CTATGGGTGC---TATT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493211 21 -  27778364 GAGCTAA-TGATGGGTGC---AATT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20044 21 +     27315 GAGCTAA-TGATGGGTGC---AATT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142298 21 -   4669795 CAGCCAA-TGATAGGCGT---TACT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46037 21 +     47900 CAGCCAA-TGATAGGCGT---TACT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1470 21 -     14410 CAGCCAA-TGATAGGCGT---TACT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45854 21 -    148725 CAGCCAA-TGATAGGCGT---TACT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28064 21 -     40656 CAGCCAG-TGATAGGCAT---TATT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8028 21 +     20796 CAGCCAA-TGATAGGCAT---TATT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13146 21 -     17524 CAGCCAA-TGATAGGCAT---TATT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28869 21 -     34525 CAGCCAA-TGATAGGCAT---TATT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12649 21 -     25376 CAGCCAA-TGATAGGCAT---TATT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365236 21 -  39242232 CAGCCAA-TGATAGGCAT---TATT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270963 21 +  21565898 CAGCCAA-TGATAGGCAT---TATT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33331 21 -     45857 CAGCCAA-TGATAGGCAT---TATT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28232 21 -     32606 CAGCCAA-TGATAGGCAT---TATT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4394 21 +      8499 CAGCCAA-TGATAGGCAT---TATT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26790 21 +     70610 CAGCCAA-TGATAGGCAT---TATT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23751 21 +     36323 CAGCCAA-TGATAGGCAT---TATT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13697 21 -     19938 GAGCTAA-CGAAGGGTGC---AGTT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31654 21 -     33796 AAGCTAA-TGATGGGTGC---TATT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6168 21 -     15404 AAGCTAA-TGATGGGTGC---TATT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9936  2 -     32913 -----------------------TT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20349  2 -     40346 -----------------------TT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20604  2 +    216457 -----------------------TT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20393  2 +     39636 -----------------------TT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239767 21 -   2543920 GAACTAA-CAATaggtgc---tatt
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           4988  2 +      5346 -----------------------CT
i Chiropotes_albinasus.k141_1946120                      C 0 I 81
s Chiropotes_israelita.k141_313004                           43460  2 -    112038 -----------------------CT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9011  2 +     34062 -----------------------CT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344652 21 +  18827391 CAGCCAA-TGATAGGCAT---TATT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11194 21 -     44032 CAGCCAA-TGATAGGCAT---TATT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305977 21 - 135778131 CAGCCAA-TGATAGGCAT---TATT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15829 21 +     15858 AAGCTAA-TGATGGGTGC---AGTT
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607404 21 -    839153 AAGCTAA-TGATGGGTGC---AGTT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2783671               342 21 +       421 GGGCTAA-TGATGAGTGC---AATT
i Chrysochloris_asiatica.ChrAsi_scaffold_2783671         C 0 C 0
s Colobus_angolensis.KN981557.1                             410382 21 -   2368649 CAGCCAG-TGATAGGCAT---TACT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380263 21 - 200372422 CAGCCAG-TGATAGGCAT---TACT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3820 21 -     84244 CAGCCAG-TGATAGGCAT---TACT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3787 21 -      8242 GAGCTAA-TGATGGATGC---AATT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 45217 21 -     83289 AAATGGA-TGATAGGTGC---TACT
i Cricetomys_gambianus.CriGam_scaffold_14425             I 22 C 0
s Cricetulus_griseus.LT883664.1                          213115852 17 - 224834208 ---TGAA-TTGTAGGTGA---TAT-
i Cricetulus_griseus.LT883664.1                          I 21 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10825 21 +     12657 CAGTCCA-TGATGTCTGT---AGTT
i Crocidura_indochinensis.CroInd_scaffold_77846          I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5375 21 +     87169 GAGCTAT-CGATGGGTGC---AATT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646423 21 -   1526836 GAGCTAA-ACACAAGTGC---CATT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19617 21 +     50838 GAAGTAA-CAATAGGTGC---TATT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5348 21 +     36344 GAACTAA-CGGTAGATGC---TATT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29128 21 +     75252 GAACTAA-CGATAGGTGC---TATT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111048 21 -   2246927 GAGCTAA-CGACGGGTGC---AGTT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293579 18 +  12879189 AAGCTAA-TG---GGTAT---TACT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632934 21 -  35494412 GAGTTAA-TAATGGGCAC---AAGT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866298 21 -  20541912 GAGCTAA-TGGTGGGTGC---AGTT
i Desmodus_rotundus.KZ672289.1                           I 26 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665495 21 -   1390856 GAGCTAA-TGATGGGTGC---AATT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140281 21 -    198055 GAGCTAA-TGATGGGTAC---AATT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99846 21 -    115145 GAACTAA-CGATAGGAAC---CATT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951587 21 -  37912305 GAGCTAA-TGTGAGATGC---CCTT
i Dipodomys_ordii.KN672350.1                             I 26 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6518 21 -     10735 GAGCTAA-TGTGAGATGC---CCTT
i Dipodomys_stephensi.DipSte_scaffold_89095              I 26 C 0
s Echinops_telfairi.JH980293.1                            62856535 21 - 111700974 GAGATAA-TGATGGGTGC---TATT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7285 21 +     19438 GAGTTAA-TGATGTGaac---aatt
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240757 21 -    607251 GAGTTAA-TAATGGGCCC---AAGT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226768 21 +  10337057 TAGCTAA-TGATGGGTTC---AATT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          32180 18 +    110024 ---TGAA-TTACAGGAAT---TACT
i Ellobius_lutescens.LOEQ01008920.1                      I 21 C 0
s Ellobius_talpinus.LOJH01026522.1                           14148 18 +     18970 ---TGAA-TTATAGGAGT---TACT
i Ellobius_talpinus.LOJH01026522.1                       I 21 C 0
s Enhydra_lutris.KZ291758.1                               24917121 21 +  41312741 GAGCTAT-TGATGGCTGC---AATT
i Enhydra_lutris.KZ291758.1                              I 24 C 0
s Eptesicus_fuscus.JH977646.1                             12579903 21 +  14770903 GAGTTTA-TGATTGGTGC---AACT
i Eptesicus_fuscus.JH977646.1                            I 25 C 0
s Equus_asinus.JREZ01000139.1                              3042420 21 -   4378816 GAACTAA-TGATGGGTGc---aagt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376358 21 +  39960074 GAACTAA-TGATGGGTGc---aagt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412340 21 -    498745 GAACTAA-TGATGGGTGc---aagt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667024 21 +   7059049 GAACTAA-TGGTGAGTGT---AATT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264188 21 +  21539334 CAGCCAA-TGATATGCAT---TATT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72140 21 -    133382 GAGTTAA-GAATGGACAC---AAGT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              727 20 -      1072 GAGTTAA-TAATGGACAC---A-GT
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15795 21 -     24895 AAACTAA-TGATGGGTGC---TATT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43505 21 -     70999 AAACTAA-TGATGGGTGC---TATT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87475 21 +    112731 AAACTAA-TGATGGGTGC---TATT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44037 21 +     68309 AAACTAA-TGATGGGTGC---TATT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54362 21 -     65740 AAACTAA-TGATGGGTGC---TATT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                24994 21 -     75513 AAACTAA-TGATGGGTGC---TATT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49189 21 -     97555 AAACTAA-TGATGGGTGC---TATT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5913 21 +     30972 AAACTAA-TGATGGGTGC---TATT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43633 21 -     52037 AAACTAA-TGATGGGTGC---TATT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60036 21 -    111500 AAACTAA-TGATGGGTGC---TATT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247836 21 - 206538554 GAGCTAC-TTATGGGTGC---AGTT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117622 21 - 205367284 GAGCTAC-TTATGGGTGC---AGTT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28719 21 -     30238 GAGCTAC-TTATGGGTGC---AGTT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2922996 21 -   3816255 GAACTAA-CAATAGGTAC---TATT
i Fukomys_damarensis.KN121974.1                          I 25 C 0
s Galago_moholi.ctg3793                                     126626 21 -    137831 AAGCTAA-TGATGGGCAT---TACT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10171 21 +     22493 AAGCTAA-TGATGGGCAT---TACT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22241 21 -     32986 AAGCTAA-TGATGGGCAT---TACT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2180 21 -     28519 GAGCTAA-TGATGGGTGC---CATT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92464 21 -     95226 GAGTTAA-TAATGGGCAC---AAGT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2320 21 -      6791 GAGCTAA-TGATAAGTAC---TATT
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6805 21 -      8343 GAGCCAG-TGATAGGTGT---TATT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255818 21 - 186649187 GAGCCAA-TGATAGGTGT---TATT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3388 21 -     78134 GAGCTAT-TGATAGCTGC---TATT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15720 21 -     40692 AAGCTAA-TGATGGGTGC---TATT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37122 21 +     49394 AAGCTAA-TGATGGGTGC---TATT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              61990 21 -     66874 AAGCTAA-TGATGGGTGC---TATT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10864 21 -     42923 AAGCTAA-TGATGGGTGC---TATT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17863 21 -     53142 AAGCTAA-TGATGGGTGC---TATT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31809 21 -    327341 GAGCTAT-TGATGGGTGC---AATT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10139 21 +     48891 GAGTTAA-CAATGGGCAC---AACT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933416 21 -  22651954 GAACTAA-CGATaactgc---tatt
i Heterocephalus_glaber.JH602082.1                       I 28 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1252 21 +      8654 GAGCTCG-TGAGGGGGGC---CGTT
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8644 21 -     36432 GCGCTAA-TAATGGGCAC---AAGT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552625 21 -   1711038 GAGCTAA-CGATGGATGC---AAGT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2064 21 -      2730 GAGCTAA-TGATGGATGC---AAGT
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143829 21 -    630532 CAGCCAA-TGATAGGCGT---TATC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71203 21 +     83186 GAGCTAT-TGATGGGTGC---AATT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72825 21 +    143317 GAACTAA-CGATAGGTGC---TATT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6863 21 +     12352 CAGCCAA-TGATAGGCGT---TATT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14047 21 +     55766 CAGCCAA-TGATAGGCGT---TATT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053647 21 + 191637585 CAGCCAA-TGATAGGCGT---TATT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802525 21 +  11177569 CAGCCAA-TGATAGGCGT---TATT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8158 21 -    135385 GAACTAA-TGATAGTTGC---TGTT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387861 21 +   7955117 ATGCTAA-GGATAGGAGC---TATT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3424 21 +     11955 AAGCTAA-TGATGGGCGC---TATT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11035 21 -     16823 GAGTTAA-TAATGGGCAC---AAGT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241098 21 +   9596543 GCAATAA-TGGTAGGTAC---TATT
i Jaculus_jaculus.JH725527.1                             I 24 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72875 21 -     97402 GAATTAA-TAATGGGCAC---AAGT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44266 21 +    110728 CAGCTAA-TCATAGCCGT---TGTT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64223 15 -     65777 ---TTTC-TGATTGGTGT---A---
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760517 21 +  30322482 AAGCTAA-TGATGGGTGC---TATT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5173 21 -     13097 CAGCTAA-TCGGAGCCGT---CCTC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4927 21 +      5940 CAGCTAA-TCGGAGCCAT---CCTC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4750 21 -      5717 CAGCTAA-TCGGAGCCGT---CCTC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11136 21 -     11567 CAGCTAC-TGAGAGCCAT---TGTC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12517 21 -     12945 CAGCTAC-TGAGAGCCAT---TGTC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10029 21 +     29618 AAGCTAA-TGATGGGTAC---TATT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10025 21 +     31569 AAGCTAA-TGATGGGTAC---TATT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10035 21 +     24756 AAGCTAG-TGATGGGTAC---TATT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10035 21 +     16388 AAGCTAA-TGATGGGTAC---TATT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814515 21 -   3914936 GAGCTAT-TGATGGGTAC---AACT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     19161 22 +     24238 aagttataggggggaagc---catt
i Lepus_americanus.LepAme_scaffold_56121                 I 291 C 0
s Lipotes_vexillifer.KE559953.1                             342220 21 +    662738 GAGTTAA-TAATGGGCAC---AAGT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335183 21 -   1826925 CAGCCAA-TGATAGGCGT---TACT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12324 21 +     19643 AATCTAA-TGATGGGCAT---TACT
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5045994 21 -   6120653 AATCTAA-TGATGGGCAT---TACT
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085921 21 +  43346337 GACCCAG-CGATGGACGC---GATT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615632 21 +  59628241 GAGCTAT-TGATGGGTGC---AGTT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46572 21 -     61512 CAGCCAA-TGATAGGCGT---TACT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374234 21 -  60120075 CAGCCAA-TGATAGGCGT---TACT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26502 21 +     30207 CAGCCAA-TGATAGGCGT---TACT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1340 21 -      5035 CAGCCAA-TGATAGGCGT---TACT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26455 21 +     30527 CAGCCAA-TGATAGGCGT---TACT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37631 21 -     50087 CAGCCAA-TGATAGGCGT---TACT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47375 21 +     51645 CAGCCAA-TGATAGGCAT---TACT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416578 21 - 187317192 CAGCCAA-TGATAGGCGT---TACT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400808 21 +  25927173 CAGCCAA-TGATAGGCGT---TACT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  49980 21 -     62418 CAGCCAA-TGATAGGCGT---TACT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2511 21 +     14901 CAGCCAA-TGATAGGCAT---TACT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46452 21 +     59329 CAGCCAA-TGATAGGCGT---TACT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272360 21 +    668171 CAGCCAA-TGATAGGCGT---TACT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                   998 21 -      5049 CAGCCAA-TGATAGGCAT---TACT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4158 21 +     17132 CAGCCAA-TGATAGGCGC---TACT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224253 21 -    270270 GAGCTAA-TGATGTGTAC---AATT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323648 21 +  24302211 CAGCCAA-TGATAGGCGT---TACT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358479 21 -    752769 CAGCCAA-TGATAGGCGT---TACT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674564 21 -    737560 GAGCTAA-TGATGGGTGC---AAAT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221864 21 +    317179 GAGCTAA-TGATGGGTGC---AAAT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502075 21 +  40650429 ATGCTAA-GGATAGGAGC---TATT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151407 21 +    207569 GAGCTGA-TGATGGATGC---AATT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27233 24 -     74585 GAGCTAC-TGATGGCTGCAACAATT
i Mellivora_capensis.MelCap_flattened_line_19308         I 8 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 51158 21 -    140813 GAATGAA-TGATAGATAC---TATT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17430235 17 +  29670104 ---TGAA-TTATAGGCGA---TCT-
i Mesocricetus_auratus.KB708134.1                        I 21 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88504 21 +     93471 GAGTTAA-TAATGGGCAC---AAGT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11298 21 +     17804 CAGCTAA-TGAGAGCCAT---TGTC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11798 21 -     12984 CAGCTAA-TGAGAGCCAT---TGTC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20114 21 -     26561 AAGCTAA-TGAGAGCCAT---TGTC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985867 21 +  93316391 AAGCTAA-TGATGGGTGC---TATT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47709 21 +    145209 AAGATAA-TGATGGGTGC---TATT
i Microgale_talazaci.MicTal_scaffold_6613                I 14 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186095 18 +    200668 ---CTAA-TTGTGGGCGC---AGTT
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 24 C 0
s Microtus_ochrogaster.CM001695.1                         15963652 18 +  27267610 ---TAAA-TTATAGGAGT---TACT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364241 21 -   8254450 GGGTTAA-TGATGGGTGC---AATT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43148 21 -     48117 GGGTTAA-TGATGGGTGC---AATT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23683 21 -     27822 CAGCCAA-TGATAGGCAT---TATT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9526 21 +     27589 GAGCTAT-TGATGGGTAC---AACT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53650 21 -     62432 AAGCTAA-TGATGGGTGC---TATT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360609 21 +    437263 GAGTTAA-TAATGGGCAC---AAGT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180324 21 +    366855 GAGCTGT-TGGTGGGTGC---AACT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 26 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26584 21 -     82753 GAGTTAA-TAAGGGGCAT---AAGT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19542 21 -     63510 GAGCTAT-TGATGGGTGC---AATT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40188 20 +     47283 GAGTTTA-TGATT-GTGC---AACT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35595264 21 + 120012414 gaatgaa-tgataggTGT---TATT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688490 21 + 129401213 GAATGAA-TGATAGGTGT---TATT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497784 21 + 130317789 GAATGAA-TGATAGGTGT---TATT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85217 21 -     86153 GAAATAA-TCATAGGTGC---TACT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356142 21 +  14710649 GAGCTAT-TGATGACTTC---AATT
i Mustela_putorius.JH418006.1                            I 8 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64122 21 +     67721 GAACTAA-TGATAGGTGC---TATT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794467 21 +  10118263 GAGTTTA-TGATTGGTAC---AACT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388641 21 +   6019432 GAGTTTA-CGTTTGGTAC---AACT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384427 21 +   4330536 GAGTTTA-TGATTGGTAc---aact
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3462 21 +     18357 GAGTTTA-CGTTTGGTAC---AACT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120803 21 +    130748 AAGTTAA-TGAGGGGTGC---AATT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947738 21 +   3037898 GAACTAA-TGACAGGAgc---catt
i Nannospalax_galili.KL204047.1                          I 26 C 0
s Nasalis_larvatus.k141_1350636                              30339 21 +     34575 CAGCCAG-TGATAGGCAT---TACT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233275 21 -   7148211 GAGTTAA-TAATGGGCAC---AAGT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nomascus_annamensis.k141_1771965                           54755 21 -    132029 CAGCCAG-TGATAGGCAT---TATT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10850 21 -     16345 CAGCCAG-TGATAGGCAT---TATT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16735 21 +     22201 CAGCCAG-TGATAGGCAT---TATT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414956 21 -  22158432 CAGCCAG-TGATAGGCAT---TATT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27133 21 -     54323 CAGCCAG-TGATAGGCAT---TATT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199228 21 +   9404916 GAGCTAT-TGATGGGTGC---AGTT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639221 21 + 196305487 AATCTAA-TGATGGGCAT---TACT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1824 21 -      9413 AATCTAA-TGATGGGCAT---TACT
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566604 21 - 199412804 AATCTAA-TGATGGGCAT---TACT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557915 20 -   3988456 GAGCTAA-TGGTGGgcac---tat-
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056224 21 -  11899542 GAACTAA-CTATagctgc---tatt
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452945 21 +   2017862 GAGCTAT-TGATGAGTAC---AAAT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437353 21 -    630418 GAGTTAA-TAATGGGTAC---AAGT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15548 21 +    150152 GAGTTAA-TAATGGGCAC---AAGT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93964 18 -    140218 ---TGAA-TTATAGGAGT---CACT
i Ondatra_zibethicus.OndZib_scaffold_7387                I 10 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4394 18 -     41509 ---TGAA-CTATAGGTAT---TGCC
i Onychomys_torridus.OnyTor_scaffold_28377               I 21 C 0
s Orcinus_orca.KB316932.1                                  8103677 21 +  10937097 GAGTTAA-TAATGGGCAC---AAGT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                704 21 +     11607 GAACGAG-TGATGGGTAC---AATT
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104672 21 - 174332312 GAGCTAA-TGGTGGGTGC---CATT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40271 21 +    559221 GAGCTAT-TGATGGGTGC---AGTT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41773 21 -     51505 AAGCTAA-TGATGGGCAT---TACT
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354777 21 +   1103335 AAGCCAA-TGATGGGCAT---TACT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405259 21 -  44047080 GAGTTAA-CAATGGGCAC---AGCT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5778 21 +     17875 GAGTTAA-CAATGGGCAC---AACT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473846 21 - 189151597 GAGCCAA-TGATAGGTGT---TATT
i Pan_troglodytes.CM009242.2                             I 86 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25542 21 -    230217 GAGCTAC-TTATGGGTGC---AGTT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462868 21 -  18783137 GAGCTAC-TTATGGGTGC---AGTT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973527 21 +   8748460 GAGCTAC-TTATGGGTGC---AGTT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616787 21 +   2937107 GAGTTAA-CAACAGGCAC---GACT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244657 21 - 183742232 CAGCCAA-TGATAGGCGT---TACT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10942 21 +     21308 CAGCCAA-TGATAGGTGT---TACT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293685 21 -  20919399 CAGCCAA-TGATAGGCGT---TACT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23590 21 -     27687 CAGCCAA-TGATAGGCGT---TACT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     261 21 +     10553 CAGCCAA-TGATAGGCGT---TACT
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   221 21 -     10386 CAGCCAA-TGATAGGTGT---TACT
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16123 21 +     78924 GAGGTAT-TGATGGGTAT---AATT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28104 21 +     31479 AAGCTAA-TGATGTGCAT---TACT
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20472 21 -     24908 AAGCTAA-TGATGTGCAT---TACT
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2928 21 +      9367 GAGCTAA-TGTGAGATGC---CATT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247604 18 +  18517816 ---TGAA-CTATAGGTGT---TACT
i Peromyscus_maniculatus.KI615324.1                      I 21 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32974 14 -     56120 GAGC--------AGGTGC---TATT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5203 21 -     63832 GAGTTAA-TAATGGGCAC---AAGT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3770 21 +     55023 CAGCCAG-TGATAGGCAG---TGCT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3308 21 -     89929 CAGCCAG-TGATAGGCAG---TGCT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3898 21 +     40849 CAGCCAG-TGATAGGCAG---TGCT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255573 21 +  14605196 CAGCCAG-TGATAGGCAG---TGCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5040 21 +     22231 GAGTTTC-TGATTGGTGC---AACT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 25 C 0
s Pithecia_albicans.k141_1239476                             65827  2 +    207309 -----------------------TT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6919  2 -     25401 -----------------------TT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32663  2 +     58159 -----------------------TT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32939  2 +     63561 -----------------------TT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32699  2 +     51148 -----------------------TT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557669  2 -   4542175 -----------------------TT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32683  2 +     51125 -----------------------TT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2220 21 +     19503 GAGTTAA-TAATGGGCAC---AAGT
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9101  2 +     39866 -----------------------TT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4183  2 -      9282 -----------------------TT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43587  2 -     87950 -----------------------TT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43981  2 -     88961 -----------------------TT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8679  2 -     39403 -----------------------TT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43630  2 +     87928 -----------------------TT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8678  2 -     60166 -----------------------TT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15615  2 -     67232 -----------------------TT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43531  2 -     90634 -----------------------TT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          44998  2 +     89403 -----------------------TT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178959 21 - 189387572 CAGCCAA-CGATAGGTGT---TACT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193776 21 -   9816681 CAGCCAA-CGATAGGTGT---TACT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28918 21 +     69807 CAGCCAG-TGATAGGCAT---TACT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46099 21 -     80239 CAGCCAG-TGATAGGCAT---TACT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5243 21 +      7663 GAGCTCG-TGAGGGGGGC---CGTT
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983665 21 +   4620579 TAGCTAA-TGATGGGTGC---TATT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567175 21 -   2598838 AAGCTAA-TGATGGGCGC---TATT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4813 21 -      7103 AAGCTAA-TGATGGGCGC---TATT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5410 21 -     11706 AAGCTAA-TTATGGGCGC---TATT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9147 21 -     30655 AAGCTAA-TGATGGGCGC---TATT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35461 21 +     46564 AAGCTAA-TGATGGGCGC---TATT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95740 21 -     98465 AAGCTAA-TGATGGGCGC---TATT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9379 21 +     35169 AAGCTAA-TGATGGGCGC---TATT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38672 20 +     52041 gaatgaa-tgatagaTTC----ATT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53218 21 -     66298 AAGCTGA-TGGTGGGTGc---aatt
i Pteronotus_parnellii.KE847780.1                        I 26 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5716 21 -     18639 GAGCTAT-TGATGGCTGC---AACT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 8 C 0
s Pteropus_alecto.KB030862.1                               5841825 21 -  28871421 GAGCTAA-TGATGTgtac---aatt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538340 21 -   4952924 GAGCTAA-TGATGTgtac---aatt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100185 21 +  38429054 GAGCTAC-TTATGGGTGC---AGTT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28285 21 +     91421 CAGCCAG-TGATAGGCGT---TACT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154769 21 -   7812017 CAGCCAG-TGATAGGCGT---TACT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9142 21 +     72585 CAGCCAG-TGATAGGCGT---TACT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54267 21 +     55069 GAGTTAA-TAATGGGCAC---AAGT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023957 21 -  90668790 gaatgaa-tgatagaTGT---TATT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915790 21 +   3329780 GAGCTAA-TGATGCATGC---AATT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2872 21 +      7119 CAGCCAG-TGATAGGCAT---TACT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123487 21 + 195417433 CAGCCAG-TGATAGGCAT---TACT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237714 21 -   7961872 CAGCCAG-TGATAGGCAT---TACT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76324 21 -    116970 GAGCTAA-TGATGTGTAC---AATT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               5048 21 +     27962 CAGCTAA-TCGGAGCCGT---CGTC
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4939 21 +      6077 CAGCTAA-TCGGAGCCGT---CGCC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5032 21 +      5971 CAGCTCA-TCGGAGCCGT---CGCC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4950 21 +      5932 CAGCTCA-TCGGAGCCGT---CGCC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3295 21 -      4390 CAGCTAA-TCGGAGCCGT---CGCC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392732 21 - 209938924 GAGCTAA-TCGGAGCCGT---CGTC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4898 21 +      5979 CAGCTCA-TCGGAGCCGT---CGCC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1468 21 -     22275 CAGCTAA-TCGGAGCCGT---CGCC
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8946 21 +     16473 GAGTTAA-CAATGGGCAC---AACT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110064 21 + 121099817 CAGCTAA-TGAGAGCCGT---TGTT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31631 21 -     47369 CAGCTAA-TGAGAGCCGT---TGTT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32017 21 -     79414 CAGTTAA-TGAAAGCCGT---TGTT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28708 21 -     34454 CAGTTAA-TGAAAGCCGT---TGTT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16109 21 -     22428 CAGTTAA-TGAGAGCCGT---TGTT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31263 21 -     47109 CAGCTAA-TGAGAGCCGT---TGTT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239314 21 +   5703754 CAGCTAA-TGGGAGCCGT---TGTT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8904 21 +     21866 CAGCTAA-TGGGAGCCGT---TGTT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26614 21 +     27374 CAGCCAG-TGGTAGGCAT---TACT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30126 21 +     58920 CAGCCAG-TGGTAGGCAT---TACT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16624 21 -     45317 CAGCCAG-TGGTAGGCAT---TACT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24282 21 -     42441 CAGCCAG-TGGTAGGCAT---TACT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26960 21 -     29113 CAGCCAG-TGGTAGGCAT---TACT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30035 21 -     48123 CAGCCAG-TGGTAGGCAT---TACT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49976 18 +     77746 ---TGAA-TTATAGGTGT---CACT
i Sigmodon_hispidus.SigHis_scaffold_20193                I 20 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865228 21 -   1910179 GAGCTAA-CAATGAGTGC---AATA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672309 20 +  18376816 GAACTA--TGAGGTCTAC---AATT
i Sorex_araneus.JH798187.1                               I 5 C 0
s Spermophilus_dauricus.KZ294078.1                         1869439 21 +   3870691 ATGCTAA-GGATAGGAGC---TATT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7800 21 -     97271 GAGCTAC-TGATGGCTGC---AATT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125959 21 +    196729 GAGCTAT-TGATGGGTGC---AATT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645011 21 +  69701581 GAGTTAA-TAATGGGTAC---AAGT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392215 21 +   1523678 CAGCCAA-TGATAGGCGT---TATT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15372 21 +     22964 GAGCTAA-TGATGGGTGC---AATT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3794 21 +      5583 AAGTTAA-TGAGGGGTGC---AATT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192683 21 +    199430 GAACTAA-TGATGGGTGC---AATT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106651 21 -    539355 GAACTAA-TGATGGGTGC---AATT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1728 21 +      9917 AAGCTAA-CTATGGGTGC---TATT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8526 21 +     20590 AAGCTAA-CTATGGGTGC---TATT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354466 21 - 186847797 CAGCCAA-TGATAGGCGT---TACT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25129 14 -     33621 GAAC--------AGGTGC---TATT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20780 21 -     31044 AAGCTAA-TGAAGGGTGC---ACTT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481217 21 -    610378 GAGCTAA-TGGCGGGTGC---AGTT
i Tonatia_saurophila.TonSau_scaffold_294                 I 26 C 0
s Trachypithecus_auratus.k141_1189070                        22159 21 +     26378 CAGCCAG-TGGTAGGCAT---TACT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34835 21 -     78344 CAGCCAG-TGGTAGGCAT---TACT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21484 21 +     25722 CAGCCAG-TGGTAGGCAT---TACT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29791 21 -     62838 CAGCCAG-TGGTAGGCAT---TACT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29835 21 +     46913 CAGCCAG-TGGTAGGCAT---TACT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10642 21 -     28527 CAGCCAG-TGGTAGGCAT---TACT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31726 21 -     64340 CAGCCAG-TGGTAGGCAT---TACT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29764 21 -     63452 CAGCCAG-TGGTAGGCAT---TACT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11211 21 +     22490 CAGCCAG-TGGTAGGCAT---TACT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4634 21 -      6147 CAGCCAG-TGGTAGGCAT---TACT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11547 21 -     13050 CAGCCAG-TGGTAGGCAT---TACT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256777 21 -   6242583 CAGCCAG-TGGTAGGCAT---TACT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2805 21 +     19340 CAGCCAG-TGGTAGGCAT---TACT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174554 21 -    200418 GAGCTCA-CAATGGGCAC---ATGT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482616 21 -  10818551 GAGCTAG-CGATGGGTGC---ACTT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835447 18 -   4065304 GAGCT----GATGGGTGC---TATT
i Tupaia_chinensis.KB320699.1                            I 54 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9467 18 -     70247 GAGCT----GATGGGTGC---TATT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366790 21 -  33153633 GAGTTAA-TAATGGGCAC---AAGT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4662  9 -     21056 -----------TAGATAC---AA--
i Uropsilus_gracilis.UroGra_scaffold_46687               I 24 C 0
s Ursus_maritimus.KK499267.1                                183119 21 +   5085361 GAGCTAT-TGATGGGTGC---GATT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26321 21 -     30710 AAGCTAA-TGATGGGTGC---TATT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25228 21 -    147434 AAGCTAA-TGATGGGTGC---TATT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77350 21 +   5488506 GAGTTAA-TGACGGGCAC---AAGT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                105994 21 -    112863 GAGCTAT-TGATGAGTGC---AGTT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175196 21 -    224448 ATGCTAA-GGATAGATCC---TACT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30153 21 -     86975 GAGCTAT-TGATGAGTAC---AAAT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1044 15 -      1899 ------A-TGCTAGGTGC---TATT
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            2074 21 +      2126 GAGTTAA-TAATGGGCAC---AAGT
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116925 18 +    313613 I
e Noctilio_leporinus.NocLep_scaffold_7894                   128981  0 -    149072 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Condylura_cristata.JH655891.1                           35808222 16 +  53390261 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6523 2 +     36723 GA
s Acinonyx_jubatus.LLWD01001279.1                           813947 2 +   1699592 AA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26282 2 +     63021 GA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416404 2 +  29979442 GA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216743 2 +    347723 GA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19590 2 -     61208 GA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49171 2 +     53615 GA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1202 2 +     13857 GA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17753 2 -     21945 GA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19438 2 +     32033 GA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73271 2 -     84148 AG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45510 2 -     78289 AG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44949 2 +     55831 AG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43399 2 -     64179 AG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            506 2 -      3959 AG
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42024 2 +     45454 AG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47673 2 +     70886 AG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9846 2 +     30854 AG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33980 2 +     42133 AG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586413 2 +   2318259 GA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178203 2 -    412891 CA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51519 2 -     68529 GA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2238 2 +     17741 AG
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2863 2 -     15923 AG
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673145 2 +   5030052 AG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3139 2 -     16391 AG
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2698 2 -     17186 AG
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17214 2 -     32367 GA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21275 2 -     45910 GA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6469 2 -     15198 CA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275736 2 +  21539123 AG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11904 2 +     48076 CG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7039 2 -     28759 CG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34593 2 +     44353 AG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49964 2 -     71267 CG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24022 2 -     33135 CG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7302 2 +     11645 GA
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7310 2 -     19611 GA
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964547 2 -  23207421 GA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1047 2 -     25979 GA
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87420 2 +    124022 GA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22962 2 +    288883 GA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357352 2 +  48749331 GA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755916 2 +   1948126 GA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546058 2 -  45695690 GA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531073 2 -   4408762 GA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8831 2 +     28062 AG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44125 2 -     91139 AG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21651 2 +     95584 AG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21564 2 +    119600 AG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11218 2 +     18648 AG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10734 2 -     13885 AG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2821 2 -      8861 AG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455213 2 + 189096842 AA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2736 2 +      8664 AG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632037 2 +  17673402 GA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666324 2 +   7040546 GA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209983 2 +   1652518 GA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506384 2 +  60362399 GG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10020 2 -     23171 GG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223363 2 +   9314153 GG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616498 2 +  59632846 GG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108079 2 -  63665305 GG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410142 2 -  46296322 GA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592416 2 +  44709034 GA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    572 2 -      1607 GA
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271525 2 +    496798 GA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1328 2 +      9923 CG
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28709 2 -     39886 GA
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80612 2 -    217609 GA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997445 2 +  23392119 ga
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000886 2 +  23407841 ga
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63967 2 -     66877 GA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6133 2 -     12580 AG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44191 2 +     53515 AG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373961 2 -  26074798 AG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9015 2 -     34880 AG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68111 2 -     89041 AG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3486 2 -      5494 GA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493232 2 -  27778364 GA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20065 2 +     27315 GA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142319 2 -   4669795 GA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46058 2 +     47900 GA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1491 2 -     14410 GA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45875 2 -    148725 GA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28085 2 -     40656 GA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8049 2 +     20796 GA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13167 2 -     17524 GA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28890 2 -     34525 GA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12670 2 -     25376 GA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365257 2 -  39242232 GA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270984 2 +  21565898 GA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33352 2 -     45857 GA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28253 2 -     32606 GA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4415 2 +      8499 GA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26811 2 +     70610 GA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23772 2 +     36323 GA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13718 2 -     19938 TA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31675 2 -     33796 GA
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6189 2 -     15404 GA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9938 2 -     32913 AG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20351 2 -     40346 AG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20606 2 +    216457 AG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20395 2 +     39636 AG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239788 2 -   2543920 ga
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           5071 2 +      5346 AG
i Chiropotes_albinasus.k141_1946120                      I 81 C 0
s Chiropotes_israelita.k141_313004                           43462 2 -    112038 AG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9013 2 +     34062 AG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344673 2 +  18827391 GA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11215 2 -     44032 GA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            305998 2 - 135778131 GA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15850 2 +     15858 GA
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607425 2 -    839153 GA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2783671               363 2 +       421 GA
i Chrysochloris_asiatica.ChrAsi_scaffold_2783671         C 0 C 0
s Colobus_angolensis.KN981557.1                             410403 2 -   2368649 GA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380284 2 - 200372422 GA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3841 2 -     84244 GA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3808 2 -      8242 GA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 45238 2 -     83289 GA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10846 2 +     12657 GA
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5396 2 +     87169 GA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646444 2 -   1526836 GA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19638 2 +     50838 GA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5369 2 +     36344 GA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29149 2 +     75252 GA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111069 2 -   2246927 TA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293597 2 +  12879189 GA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632955 2 -  35494412 GA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866319 2 -  20541912 CA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665516 2 -   1390856 GA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140302 2 -    198055 GA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99867 2 -    115145 GA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951608 2 -  37912305 GC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6539 2 -     10735 GC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856556 2 - 111700974 GA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7306 2 +     19438 ga
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240778 2 -    607251 GA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226789 2 +  10337057 GA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          32198 2 +    110024 GA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           14166 2 +     18970 GA
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917142 2 +  41312741 GA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579924 2 +  14770903 GA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042441 2 -   4378816 ga
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376379 2 +  39960074 ga
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412361 2 -    498745 ga
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667045 2 +   7059049 CA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264209 2 +  21539334 GA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72161 2 -    133382 GA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              747 2 -      1072 GA
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15816 2 -     24895 GA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43526 2 -     70999 GA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87496 2 +    112731 GA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44058 2 +     68309 GA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54383 2 -     65740 GA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25015 2 -     75513 GA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49210 2 -     97555 GA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5934 2 +     30972 GA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43654 2 -     52037 GA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60057 2 -    111500 GA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247857 2 - 206538554 AA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117643 2 - 205367284 AA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28740 2 -     30238 AA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923017 2 -   3816255 GA
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126647 2 -    137831 GA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10192 2 +     22493 GA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22262 2 -     32986 GA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2201 2 -     28519 GA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92485 2 -     95226 GA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2341 2 -      6791 GA
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6826 2 -      8343 GA
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255839 2 - 186649187 GA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3409 2 -     78134 GA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15741 2 -     40692 GA
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37143 2 +     49394 GA
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62011 2 -     66874 GA
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10885 2 -     42923 GA
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17884 2 -     53142 GA
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31830 2 -    327341 GA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10160 2 +     48891 GA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933437 2 -  22651954 ga
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1273 2 +      8654 GA
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8665 2 -     36432 GA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552646 2 -   1711038 GA
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2085 2 -      2730 GA
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143850 2 -    630532 GA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71224 2 +     83186 GA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72846 2 +    143317 GA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6884 2 +     12352 GA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14068 2 +     55766 GA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053668 2 + 191637585 GA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802546 2 +  11177569 GA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8179 2 -    135385 GA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387882 2 +   7955117 GA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3445 2 +     11955 GA
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11056 2 -     16823 GA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241119 2 +   9596543 GA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72896 2 -     97402 GA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44287 2 +    110728 AG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64238 1 -     65777 -A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760538 2 +  30322482 GA
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5194 2 -     13097 AG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4948 2 +      5940 AG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4771 2 -      5717 AG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11157 2 -     11567 AG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12538 2 -     12945 AG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10050 2 +     29618 GA
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10046 2 +     31569 GA
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10056 2 +     24756 GA
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10056 2 +     16388 GA
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814536 2 -   3914936 GA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     19183 2 +     24238 gt
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 3
s Lipotes_vexillifer.KE559953.1                             342241 2 +    662738 GA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335204 2 -   1826925 GA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12345 2 +     19643 GA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046015 2 -   6120653 GA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085942 2 +  43346337 GG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615653 2 +  59628241 GG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46593 2 -     61512 GA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374255 2 -  60120075 GA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26523 2 +     30207 GA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1361 2 -      5035 GA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26476 2 +     30527 GA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37652 2 -     50087 GA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47396 2 +     51645 GA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416599 2 - 187317192 GA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400829 2 +  25927173 GA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50001 2 -     62418 GA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2532 2 +     14901 GA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46473 2 +     59329 GA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272381 2 +    668171 GA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1019 2 -      5049 GA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4179 2 +     17132 GA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224274 2 -    270270 GA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323669 2 +  24302211 GA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358500 2 -    752769 GA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674585 2 -    737560 GA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221885 2 +    317179 GA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502096 2 +  40650429 GA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151428 2 +    207569 GA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27257 2 -     74585 GA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 51179 2 -    140813 GA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88525 2 +     93471 GA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11319 2 +     17804 AG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11819 2 -     12984 AG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20135 2 -     26561 AG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985888 2 +  93316391 GA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47730 2 +    145209 GA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186113 2 +    200668 CA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963670 2 +  27267610 GA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364262 2 -   8254450 GA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43169 2 -     48117 GA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23704 2 -     27822 GA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9547 2 +     27589 GA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53671 2 -     62432 GA
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360630 2 +    437263 GA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180345 2 +    366855 CA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26605 2 -     82753 GA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19563 2 -     63510 GA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40208 2 +     47283 GA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35595285 2 + 120012414 GA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688511 2 + 129401213 AA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497805 2 + 130317789 AA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85238 2 -     86153 GA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356163 2 +  14710649 GA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64143 2 +     67721 GA
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 15
s Myotis_brandtii.KE162005.1                               9794488 2 +  10118263 GA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388662 2 +   6019432 GA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384448 2 +   4330536 ga
i Myotis_lucifugus.GL429869.1                            C 0 I 240
s Myotis_myotis.MyoMyo_scaffold_66571                         3483 2 +     18357 GA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120824 2 +    130748 CA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947759 2 +   3037898 ga
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30360 2 +     34575 GA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233296 2 -   7148211 GA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nomascus_annamensis.k141_1771965                           54776 2 -    132029 GA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10871 2 -     16345 GA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16756 2 +     22201 GA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414977 2 -  22158432 GA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27154 2 -     54323 GA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199249 2 +   9404916 GG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639242 2 + 196305487 GA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1845 2 -      9413 GA
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566625 2 - 199412804 GA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                11056245 2 -  11899542 ga
i Octodon_degus.JH651603.1                               C 0 I 4
s Odobenus_rosmarus.KB229312.1                             1452966 2 +   2017862 GA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437374 2 -    630418 GA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15569 2 +    150152 GA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93982 2 -    140218 TT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4412 2 -     41509 GA
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103698 2 +  10937097 GA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                725 2 +     11607 GA
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104693 2 - 174332312 GA
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 15
s Otocyon_megalotis.JAEUCK010005147.1                        40292 2 +    559221 GG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41794 2 -     51505 GA
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354798 2 +   1103335 Ga
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405280 2 -  44047080 GA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5799 2 +     17875 GA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473867 2 - 189151597 GA
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25563 2 -    230217 AA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462889 2 -  18783137 AA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973548 2 +   8748460 AA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616808 2 +   2937107 GA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244678 2 - 183742232 GA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10963 2 +     21308 GA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293706 2 -  20919399 GA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23611 2 -     27687 GA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     282 2 +     10553 GA
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   242 2 -     10386 GA
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16144 2 +     78924 GA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28125 2 +     31479 GA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20493 2 -     24908 GA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2949 2 +      9367 TC
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247622 2 +  18517816 GA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32988 2 -     56120 GA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5224 2 -     63832 GA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3791 2 +     55023 GA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3329 2 -     89929 GA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3919 2 +     40849 GA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255594 2 +  14605196 GA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5061 2 +     22231 GA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65829 2 +    207309 AG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6921 2 -     25401 AG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32665 2 +     58159 AG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32941 2 +     63561 AG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32701 2 +     51148 AG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557671 2 -   4542175 AG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32685 2 +     51125 AG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2241 2 +     19503 GA
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9103 2 +     39866 AG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4185 2 -      9282 AG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43589 2 -     87950 AG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43983 2 -     88961 AG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8681 2 -     39403 AG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43632 2 +     87928 AG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8680 2 -     60166 AG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15617 2 -     67232 AG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43533 2 -     90634 AG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45000 2 +     89403 AG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178980 2 - 189387572 GA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193797 2 -   9816681 GA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28939 2 +     69807 GA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46120 2 -     80239 GA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5264 2 +      7663 GA
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983686 2 +   4620579 GA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567196 2 -   2598838 GA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4834 2 -      7103 GA
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5431 2 -     11706 GA
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9168 2 -     30655 GA
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35482 2 +     46564 GA
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95761 2 -     98465 GA
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9400 2 +     35169 GA
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38692 2 +     52041 GA
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53239 2 -     66298 ca
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5737 2 -     18639 GA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841846 2 -  28871421 ga
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538361 2 -   4952924 ga
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100206 2 +  38429054 AA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28306 2 +     91421 GA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154790 2 -   7812017 GA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9163 2 +     72585 GA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54288 2 +     55069 GA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023978 2 -  90668790 GG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915811 2 +   3329780 GA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2893 2 +      7119 GA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123508 2 + 195417433 GA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237735 2 -   7961872 GA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76345 2 -    116970 GA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               5069 2 +     27962 AG
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4960 2 +      6077 AG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5053 2 +      5971 AG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4971 2 +      5932 AG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3316 2 -      4390 AG
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392753 2 - 209938924 AG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4919 2 +      5979 AG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1489 2 -     22275 AG
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8967 2 +     16473 GA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110085 2 + 121099817 AG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31652 2 -     47369 AG
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32038 2 -     79414 AG
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28729 2 -     34454 AG
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16130 2 -     22428 AG
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31284 2 -     47109 AG
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239335 2 +   5703754 AG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8925 2 +     21866 AG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26635 2 +     27374 GA
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30147 2 +     58920 GA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16645 2 -     45317 GA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24303 2 -     42441 GA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26981 2 -     29113 GA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30056 2 -     48123 GA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49994 2 +     77746 GA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865249 2 -   1910179 TA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672329 2 +  18376816 GA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869460 2 +   3870691 GA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7821 2 -     97271 GA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125980 2 +    196729 GA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645032 2 +  69701581 GA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392236 2 +   1523678 GA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15393 2 +     22964 GA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3815 2 +      5583 CA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192704 2 +    199430 GA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106672 2 -    539355 GA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1749 2 +      9917 GA
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8547 2 +     20590 GA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354487 2 - 186847797 GA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25143 2 -     33621 GA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20801 2 -     31044 TA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481238 2 -    610378 CA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22180 2 +     26378 GA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34856 2 -     78344 GA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21505 2 +     25722 GA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29812 2 -     62838 GA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29856 2 +     46913 GA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10663 2 -     28527 GA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31747 2 -     64340 GA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29785 2 -     63452 GA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11232 2 +     22490 GA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4655 2 -      6147 GA
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11568 2 -     13050 GA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256798 2 -   6242583 GA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2826 2 +     19340 GA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174575 2 -    200418 GA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482637 2 -  10818551 GA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835465 2 -   4065304 GA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9485 2 -     70247 GA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366811 2 -  33153633 GA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Ursus_maritimus.KK499267.1                                183140 2 +   5085361 GA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26342 2 -     30710 GA
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25249 2 -    147434 GA
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77371 2 +   5488506 GA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106015 2 -    112863 GG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175217 2 -    224448 GA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30174 2 -     86975 GA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1059 2 -      1899 GA
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            2095 2 +      2126 GG
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    4671 0 -     21056 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116925 18 +    313613 I
e Ochotona_princeps.JH802162.1                             2557935 0 -   3988456 C
e Noctilio_leporinus.NocLep_scaffold_7894                   128981 0 -    149072 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Mesocricetus_auratus.KB708134.1                         17430252 0 +  29670104 C
e Cricetulus_griseus.LT883664.1                          213115869 0 - 224834208 C
e Condylura_cristata.JH655891.1                           35808222 16 +  53390261 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6525  8 +     36723 C---------CT-T------------------T----CTT
s Acinonyx_jubatus.LLWD01001279.1                           813949  8 +   1699592 T---------TT-T------------------T----CTG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26284  4 +     63021 C---------TC-T--------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416406  8 +  29979442 T---------TT-T------------------T----CTT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216745  8 +    347723 T---------TT-T------------------T----CTT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19592  6 -     61208 G---------TT-C------------------C----T--
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49173  8 +     53615 C---------CT-T------------------T----CTT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1204  8 +     13857 C---------CT-T------------------T----CTT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17755  8 -     21945 C---------CT-T------------------T----CTT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19440  8 +     32033 C---------CT-T------------------T----CTT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73273  8 -     84148 C---------TC-T------------------T----CTT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45512  8 -     78289 C---------TC-T------------------T----CTT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44951  8 +     55831 C---------TC-T------------------T----CTT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43401  8 -     64179 C---------TC-T------------------T----CTT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            508  8 -      3959 C---------TC-T------------------T----CTT
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42026  8 +     45454 C---------TC-T------------------T----CTT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47675  8 +     70886 C---------TC-T------------------T----CTT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9848  8 +     30854 C---------TC-T------------------T----CTT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33982  8 +     42133 C---------TC-T------------------T----CTT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586415  8 +   2318259 T---------TT-T------------------T----CTT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178205  8 -    412891 G---------TT-T------------------T----CCT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51521  8 -     68529 T---------TT-T------------------T----CCT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2240  8 +     17741 C---------TC-T------------------C----TTT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2865  8 -     15923 C---------TC-T------------------C----TTT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673147  8 +   5030052 C---------TC-T------------------C----TTT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3141  8 -     16391 C---------TC-T------------------C----TTT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2700  8 -     17186 C---------TC-T------------------C----TTT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17216  8 -     32367 T---------TT-T------------------T----CTT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21277  8 -     45910 T---------TT-C------------------T----CTA
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6471  8 -     15198 G---------TT-T------------------T----CCT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275738  8 +  21539123 C---------TC-T------------------T----CTC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11906  8 +     48076 C---------TC-T------------------T----CTC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7041  8 -     28759 C---------TC-T------------------T----CTC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34595  8 +     44353 C---------TC-T------------------T----CTC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49966  8 -     71267 C---------TC-T------------------T----CTC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24024  8 -     33135 C---------TC-T------------------T----CTC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7304  8 +     11645 T---------TT-T------------------T----CTT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7312  8 -     19611 T---------TT-T------------------T----CTT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964549  8 -  23207421 T---------TT-T------------------T----CTT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1049  8 -     25979 T---------TT-T------------------T----CTT
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87422  8 +    124022 T---------TT-T------------------T----CTT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22964  8 +    288883 T---------TT-T------------------T----CTT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357354  8 +  48749331 T---------TT-T------------------T----CTT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755918  8 +   1948126 T---------TT-T------------------T----CTT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546060  8 -  45695690 T---------TT-T------------------T----CTT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531075  8 -   4408762 T---------TT-T------------------T----CTT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8833  8 +     28062 C---------TC-T------------------T----CTT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44127  8 -     91139 C---------TC-T------------------T----CTT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21653  8 +     95584 C---------TC-T------------------T----CTT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21566  8 +    119600 C---------TC-T------------------T----CTT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11220  8 +     18648 C---------TC-T------------------T----CTT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10736  8 -     13885 C---------TC-T------------------T----CTT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2823  8 -      8861 C---------TC-T------------------T----CTT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455215  8 + 189096842 C---------TC-T------------------T----CTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2738  8 +      8664 C---------TC-T------------------T----CTT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632039  8 +  17673402 T---------TT-T------------------T----TGG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666326  8 +   7040546 T---------TT-T------------------T----GGG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209985  7 +   1652518 T---------TT-T------------------T-----GG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506386  8 +  60362399 T---------TT-T------------------T----CTT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10022  8 -     23171 T---------TT-T------------------T----CTT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223365  8 +   9314153 T---------TT-T------------------T----CTT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616500  8 +  59632846 T---------TT-T------------------T----CTT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108081  8 -  63665305 T---------TT-T------------------T----CTT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410144  8 -  46296322 T---------TT-T------------------T----CTT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592418  8 +  44709034 T---------TT-T------------------T----CTT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    574  3 -      1607 T---------TT----------------------------
i Capromys_pilorides.CapPil_scaffold_762519              C 0 I 3
s Carlito_syrichta.NW_007259797.1                           271527  8 +    496798 C---------TT-T------------------T----CTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1330  8 +      9923 G---------TT-T------------------T----CCT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28711  8 -     39886 T---------TT-T------------------T----CTT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80614  8 -    217609 T---------TT-T------------------T----CTT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997447 22 +  23392119 tgtttttttttttt------------------tttttttt
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000888 22 +  23407841 tgttttgttttttt------------------tttttttt
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63969 12 -     66877 TGTTTTGTTTTT----------------------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 8
s Cebuella_niveiventris.k141_592277                           6135  8 -     12580 C---------TC-T------------------T----CTT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44193  8 +     53515 C---------TC-T------------------T----CTT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373963  8 -  26074798 C---------TC-T------------------T----CCT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9017  8 -     34880 C---------TC-T------------------T----CCT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68113  8 -     89041 C---------TC-T------------------T----CCT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3488  8 -      5494 C---------TT-T------------------T----CTT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493234  8 -  27778364 T---------TT-T------------------T----CTT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20067  8 +     27315 T---------TT-T------------------T----CTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142321  7 -   4669795 C----------T-T------------------T----CTT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46060  7 +     47900 C----------T-T------------------T----CTT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1493  7 -     14410 C----------T-T------------------T----CTT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45877  7 -    148725 C----------T-T------------------T----CTT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28087  8 -     40656 C---------CT-T------------------T----CTT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8051  8 +     20796 C---------CT-T------------------T----CTT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13169  8 -     17524 C---------CT-T------------------T----CTT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28892  8 -     34525 C---------CT-T------------------T----CTT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12672  8 -     25376 C---------CT-T------------------T----CTT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365259  8 -  39242232 C---------CT-T------------------T----CTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270986  8 +  21565898 C---------CT-T------------------T----CTT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33354  8 -     45857 C---------CT-T------------------T----CTT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28255  8 -     32606 C---------CT-T------------------T----CTT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4417  8 +      8499 C---------CT-T------------------T----CTT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26813  8 +     70610 C---------CT-T------------------T----CTT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23774  8 +     36323 C---------CT-T------------------T----CTT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13720  5 -     19938 T---------TC-T------------------T-------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31677  8 -     33796 T---------TT-T------------------T----CTT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6191  8 -     15404 T---------TT-T------------------T----CTT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9940  8 -     32913 C---------TC-T------------------T----CTT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20353  8 -     40346 C---------TC-T------------------T----CTT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20608  8 +    216457 C---------TC-T------------------T----CTT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20397  8 +     39636 C---------TC-T------------------T----CTT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239790  9 -   2543920 t---------tttt------------------t----ggg
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           5073  8 +      5346 C---------TC-T------------------T----CCT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43464  8 -    112038 C---------TC-T------------------T----CTT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9015  8 +     34062 C---------TC-T------------------T----CTT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344675  8 +  18827391 C---------CT-T------------------T----CTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11217  8 -     44032 C---------CT-T------------------T----CTT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306000  8 - 135778131 C---------CT-T------------------T----CTT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15852  5 +     15858 T---------TT-T------------------T-------
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607427  5 -    839153 T---------TT-T------------------T-------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2783671               365  8 +       421 T---------TT-T------------------T----CTT
i Chrysochloris_asiatica.ChrAsi_scaffold_2783671         C 0 C 0
s Colobus_angolensis.KN981557.1                             410405  8 -   2368649 C---------AT-T------------------T----CTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380286  8 - 200372422 C---------GT-T------------------T----CTT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3843  8 -     84244 C---------GT-T------------------T----CTT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3810  8 -      8242 T---------TT-T------------------T----CTT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 45240  8 -     83289 T---------TT-T------------------T----TGT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115869  7 - 224834208 T----------T-T------------------T----CCT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10848  8 +     12657 T---------TT-C------------------T----CTT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5398  8 +     87169 T---------TT-T------------------T----CTG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646446  8 -   1526836 T---------TT-C------------------T----CTC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19640  9 +     50838 T---------TTTT------------------T----TTT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5371  8 +     36344 T---------TTTT------------------T-----TT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29151 12 +     75252 T---------TTTT------------------T-TTTTTT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111071  5 -   2246927 T---------TC-T------------------T-------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293599  8 +  12879189 T---------TT-T------------------T----CTT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632957  8 -  35494412 T---------TT-T------------------T----CTT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866321  8 -  20541912 G---------TT-T------------------T----CCT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665518  8 -   1390856 T---------TT-T------------------T----CTT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140304  8 -    198055 T---------TT-T------------------T----CTT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99869  9 -    115145 T---------TTTT------------------T----GGG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951610  8 -  37912305 T---------TT-T------------------T----CTT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6541  8 -     10735 T---------TT-T------------------T----CTT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856558  8 - 111700974 T---------TT-T------------------T----CTT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7308  8 +     19438 t---------tt-t------------------t----ctt
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240780  8 -    607251 T---------TT-T------------------T----CTT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226791  8 +  10337057 T---------TT-T------------------T----CTT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          32200  8 +    110024 T---------TT-T------------------C----CCT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           14168  8 +     18970 T---------TT-T------------------C----CAT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917144  8 +  41312741 T---------TT-T------------------T----CTT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579926  4 +  14770903 G---------TT-T--------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042443  8 -   4378816 t---------tt-t------------------t----ctt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376381  8 +  39960074 t---------tt-t------------------t----ctt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412363  8 -    498745 t---------tt-t------------------t----ctt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667047  8 +   7059049 T---------TT-T------------------T----CTT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264211  8 +  21539334 C---------CT-T------------------T----CTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72163  8 -    133382 T---------TT-T------------------T----CTT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              749  8 -      1072 T---------TT-T------------------T----CTT
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15818  8 -     24895 G---------TT-T------------------T----CTT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43528  8 -     70999 G---------TT-T------------------T----CTT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87498  8 +    112731 G---------TT-T------------------T----CTT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44060  8 +     68309 G---------TT-T------------------T----CTT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54385  8 -     65740 G---------TT-T------------------T----CTT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25017  8 -     75513 G---------TT-T------------------T----CTT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49212  8 -     97555 G---------TT-T------------------T----CTT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5936  8 +     30972 G---------TT-T------------------T----CTT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43656  8 -     52037 G---------TT-T------------------T----CTT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60059  8 -    111500 G---------TT-T------------------T----CTT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247859  8 - 206538554 T---------TT-T------------------T----CTG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117645  8 - 205367284 T---------TT-T------------------T----CTG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28742  8 -     30238 T---------TT-T------------------T----CTG
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923019  7 -   3816255 T---------TT-T------------------T----CT-
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126649  8 -    137831 T---------TT-C------------------T----CTA
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10194  8 +     22493 T---------TT-C------------------T----CTA
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22264  8 -     32986 T---------TT-C------------------T----CTA
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2203  8 -     28519 T---------TT-T------------------T----CTT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92487  8 -     95226 T---------TT-T------------------T----CTT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2343  8 -      6791 T---------TT-T------------------T----CTT
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6828  8 -      8343 C---------CT-T------------------T----CCT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255841  8 - 186649187 C---------CT-T------------------T----CTT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3411  8 -     78134 T---------TT-T------------------T----CTT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15743  8 -     40692 G---------TT-T------------------T----CTT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37145  8 +     49394 G---------TT-T------------------T----CTT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62013  8 -     66874 G---------TT-T------------------T----CTT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10887  8 -     42923 G---------TT-T------------------T----CTT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17886  8 -     53142 G---------TT-T------------------T----CTT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31832  8 -    327341 T---------TT-T------------------T----CTG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10162  8 +     48891 T---------TT-T------------------T----CTT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933439  7 -  22651954 t---------tt-t------------------t----ct-
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1275  8 +      8654 T---------TT-C------------------T----CTT
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8667  8 -     36432 T---------TT-T------------------T----CTT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552648  8 -   1711038 T---------AT-T------------------T----CTT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2087  8 -      2730 T---------AT-T------------------T----CTT
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143852  8 -    630532 C---------CT-T------------------T----CTT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71226  8 +     83186 T---------TT-T------------------T----CTG
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72848 13 +    143317 T---------TTTT------------------TTTTTTTT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6886  8 +     12352 C---------CT-T------------------T----CTT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14070  8 +     55766 C---------CT-T------------------T----CTT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053670  8 + 191637585 C---------CT-T------------------T----CTT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802548  8 +  11177569 C---------CT-T------------------T----CTT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8181  8 -    135385 T---------TT-T------------------T----CTT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387884  8 +   7955117 T---------TT-T------------------T----CTT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3447  8 +     11955 T---------TT-T------------------T----CTT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11058  8 -     16823 T---------TT-T------------------T----CTT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241121  8 +   9596543 G---------TT-TTC----------------C----A--
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72898  8 -     97402 T---------TT-T------------------T----CTT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44289  8 +    110728 C---------TC-T------------------T----CTT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64239  4 -     65777 G---------TT-T--------------------------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760540  8 +  30322482 G---------TT-T------------------T----CTT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5196  8 -     13097 C---------TC-T------------------T----CTT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4950  8 +      5940 C---------TC-T------------------T----CTT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4773  8 -      5717 C---------TC-T------------------T----CTT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11159  8 -     11567 C---------TC-T------------------T----CTT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12540  8 -     12945 C---------TC-T------------------T----CTT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10052  8 +     29618 A---------TT-T------------------T----CTT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10048  8 +     31569 A---------TT-T------------------T----CTT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10058  8 +     24756 A---------TT-T------------------T----CTT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10058  8 +     16388 A---------TT-T------------------T----CTT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814538  8 -   3914936 T---------TT-T------------------T----CTT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     19188  3 +     24238 -------------------------------------cta
i Lepus_americanus.LepAme_scaffold_56121                 I 3 C 0
s Lipotes_vexillifer.KE559953.1                             342243  8 +    662738 T---------TT-T------------------T----CTT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335206  7 -   1826925 C----------T-T------------------T----CTT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12347  8 +     19643 T---------TT-C------------------T----CTA
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046017  8 -   6120653 T---------TT-C------------------T----CTA
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085944  8 +  43346337 T---------TT-T------------------T----CTT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615655  8 +  59628241 T---------TT-T------------------T----CTT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46595  7 -     61512 C----------T-T------------------T----CTT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374257  7 -  60120075 C----------T-T------------------T----CTT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26525  7 +     30207 C----------T-T------------------T----CTT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1363  7 -      5035 C----------T-T------------------T----CTT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26478  7 +     30527 C----------T-T------------------T----CTT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37654  7 -     50087 C----------T-T------------------T----CTT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47398  7 +     51645 C----------T-T------------------T----CTT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416601  7 - 187317192 C----------T-T------------------T----CTT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400831  7 +  25927173 C----------T-T------------------T----CTT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50003  7 -     62418 C----------T-T------------------T----CTT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2534  7 +     14901 C----------T-T------------------T----CTT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46475  7 +     59329 C----------T-T------------------T----CTT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272383  7 +    668171 C----------T-T------------------T----CTT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1021  7 -      5049 C----------T-T------------------T----CTT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4181  7 +     17132 C----------T-T------------------T----CTT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224276  8 -    270270 T---------TT-T------------------T----CTT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323671  7 +  24302211 C----------T-T------------------T----CTT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358502  7 -    752769 C----------T-T------------------T----CTT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674587  8 -    737560 T---------TT-G------------------T----CTT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221887  8 +    317179 T---------TT-G------------------T----CTT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502098  8 +  40650429 T---------TT-T------------------T----CTT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151430  8 +    207569 T---------TT-T------------------T----CTT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27259  8 -     74585 T---------TT-T------------------T----CTT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 51181  8 -    140813 T---------TT-C------------------C----ACT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17430252  8 +  29670104 T---------TT-T------------------T----CCT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88527  8 +     93471 T---------TT-T------------------T----CTT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11321  8 +     17804 C---------TC-T------------------T----CTT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11821  8 -     12984 C---------TC-T------------------T----CTT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20137  8 -     26561 C---------TC-T------------------T----CTT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985890  8 +  93316391 T---------TT-T------------------T----CTT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47732  8 +    145209 T---------TT-T------------------T----CTT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186115  8 +    200668 G---------CT-T------------------T----CCT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963672  8 +  27267610 T---------TT-T------------------C----CCT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364264  8 -   8254450 G---------TT-T------------------A----CTT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43171  8 -     48117 G---------TT-T------------------A----CTT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23706  8 -     27822 C---------CT-T------------------T----CTT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9549  8 +     27589 T---------TT-T------------------T----CTT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53673  8 -     62432 T---------TT-T------------------T----CTT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360632  8 +    437263 T---------TT-T------------------T----CTT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180347  8 +    366855 G---------TT-T------------------T----CCT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26607  8 -     82753 T---------TT-T------------------T----CTT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19565  8 -     63510 T---------TT-T------------------T----CTG
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40210  4 +     47283 G---------TT-T--------------------------
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35595287  8 + 120012414 T---------TT-T------------------C----ACT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688513  8 + 129401213 T---------TT-T------------------C----ACT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497807  8 + 130317789 T---------TT-T------------------C----ACT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85240 15 -     86153 T---------TT-TT-TT--------TT--TTT----TTT
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356165  8 +  14710649 T---------TT-T------------------T----CTT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64160  4 +     67721 --------------------------------T----TTT
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 15 C 0
s Myotis_brandtii.KE162005.1                               9794490  4 +  10118263 G---------TT-T--------------------------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388664  4 +   6019432 G---------TT-T--------------------------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384690  4 +   4330536 G---------TT-T--------------------------
i Myotis_lucifugus.GL429869.1                            I 240 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3485  4 +     18357 G---------TT-T--------------------------
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120826 23 +    130748 T---------TT-TTCTTGGAACAGCTTGACTT-------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947761  8 +   3037898 t---------tt-t------------------t----ctt
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30362  8 +     34575 C---------AT-T------------------T----CTT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233298  8 -   7148211 T---------TT-T------------------T----CTT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nomascus_annamensis.k141_1771965                           54778  8 -    132029 C---------CT-T------------------T----CTT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10873  8 -     16345 C---------CT-T------------------T----CTT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16758  8 +     22201 C---------CT-T------------------T----CTT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414979  8 -  22158432 C---------CT-T------------------T----CTT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27156  8 -     54323 C---------CT-T------------------T----CTT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199251  8 +   9404916 T---------TT-T------------------T----CTT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639244  8 + 196305487 T---------TT-C------------------T----CTA
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1847  8 -      9413 T---------TT-C------------------T----CTA
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566627  8 - 199412804 T---------TT-C------------------T----CTA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557935  8 -   3988456 t---------tt-t------------------t----ttc
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056251  4 -  11899542 --------------------------------t----ttt
i Octodon_degus.JH651603.1                               I 4 C 0
s Odobenus_rosmarus.KB229312.1                             1452968  8 +   2017862 T---------TT-T------------------T----CTT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437376  8 -    630418 T---------TT-T------------------T----CTT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15571  8 +    150152 T---------TT-T------------------T----CTT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93984  9 -    140218 T--------TTT-T------------------C----CCT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 2
s Onychomys_torridus.OnyTor_scaffold_28377                    4414  8 -     41509 T---------TT-T------------------C----CCT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103700  8 +  10937097 T---------TT-T------------------T----CTT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                727  8 +     11607 T---------TT-T------------------T----CTT
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104710  3 - 174332312 -------------------------------------Ctt
i Oryctolagus_cuniculus.CM000791.1                       I 15 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40294  8 +    559221 T---------TT-T------------------T----CTT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41796  8 -     51505 T---------TT-C------------------T----CTA
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354800  8 +   1103335 t---------tt-c------------------t----cta
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405282  8 -  44047080 T---------TT-T------------------T----CTT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5801  8 +     17875 T---------TT-T------------------T----CTT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473869  8 - 189151597 C---------CT-T------------------T----CTT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25565  8 -    230217 T---------TT-T------------------T----CTG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462891  8 -  18783137 T---------TT-T------------------T----CTG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973550  8 +   8748460 T---------TT-T------------------T----CTG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616810  8 +   2937107 T---------TT-T------------------T----CTG
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244680  7 - 183742232 C----------T-T------------------T----CTT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10965  7 +     21308 C----------T-T------------------T----CTT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293708  7 -  20919399 C----------T-T------------------T----CTT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23613  7 -     27687 C----------T-T------------------T----CTT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     284  7 +     10553 C----------T-T------------------T----CTT
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   244  7 -     10386 C----------T-T------------------T----CTT
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16146  8 +     78924 T---------TT-T------------------T----CTG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28127  8 +     31479 T---------TT-C------------------T----CTA
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20495  8 -     24908 T---------TT-C------------------T----CTA
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2951  8 +      9367 T---------TT-T------------------T----CTT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247624  8 +  18517816 T---------TT-T------------------C----CCT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32990  8 -     56120 T---------TT-T------------------T----CTT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5226  8 -     63832 T---------TT-T------------------T----CTT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3793  8 +     55023 C---------AT-T------------------T----CTT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3331  8 -     89929 C---------AT-T------------------T----CTT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3921  8 +     40849 C---------AT-T------------------T----CTT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255596  8 +  14605196 C---------AT-T------------------T----CTT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5063  4 +     22231 G---------TT-T--------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65831  8 +    207309 C---------TC-T------------------T----CTT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6923  8 -     25401 C---------TC-T------------------T----CTT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32667  8 +     58159 C---------TC-T------------------T----CTT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32943  8 +     63561 C---------TC-T------------------T----CTT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32703  8 +     51148 C---------TC-T------------------T----CTT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557673  8 -   4542175 C---------TC-T------------------T----CTT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32687  8 +     51125 C---------TC-T------------------T----CTT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2243  8 +     19503 C---------TT-T------------------T----CTT
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9105  8 +     39866 C---------TC-T------------------T----CTT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4187  8 -      9282 C---------TC-T------------------T----CTT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43591  8 -     87950 C---------TC-T------------------T----CTT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43985  8 -     88961 C---------TC-T------------------T----CTT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8683  8 -     39403 C---------TC-T------------------T----CTT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43634  8 +     87928 C---------TC-T------------------T----CTT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8682  8 -     60166 C---------TC-T------------------T----CTT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15619  8 -     67232 C---------TC-T------------------T----CTT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43535  8 -     90634 C---------TC-T------------------T----CTT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45002  8 +     89403 C---------TC-T------------------T----CTT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178982  8 - 189387572 C---------CT-T------------------T----CTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193799  8 -   9816681 C---------CT-T------------------T----CTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28941  8 +     69807 C---------AT-T------------------T----CTT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46122  8 -     80239 C---------AT-T------------------T----CTT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5266  8 +      7663 T---------TT-C------------------T----CTT
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983688  8 +   4620579 G---------TT-T------------------T----CTT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567198  8 -   2598838 T---------TT-T------------------T----CTT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4836  8 -      7103 T---------TT-T------------------T----CTT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5433  8 -     11706 T---------TT-T------------------T----CTT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9170  8 -     30655 T---------TT-T------------------T----CTT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35484  8 +     46564 T---------TT-T------------------T----CTT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95763  8 -     98465 T---------TT-T------------------T----CTT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9402  8 +     35169 T---------TT-T------------------T----CTT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38694  8 +     52041 T---------TT-C------------------C----ACT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53241  8 -     66298 g---------tt-t------------------t----cct
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5739  8 -     18639 T---------TT-T------------------T----CTT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841848  8 -  28871421 t---------tt-t------------------t----ctt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538363  8 -   4952924 t---------tt-t------------------t----ctt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100208  8 +  38429054 T---------TT-T------------------T----CTG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28308  8 +     91421 C---------AT-T------------------T----CTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154792  8 -   7812017 C---------AT-T------------------T----CTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9165  8 +     72585 C---------AT-T------------------T----CTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54290  8 +     55069 T---------TT-T------------------T----CTT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023980  8 -  90668790 T---------TT-T------------------C----ACT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915813  8 +   3329780 T---------AT-T------------------T----CTT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2895  8 +      7119 C---------AT-T------------------T----CTT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123510  8 + 195417433 C---------AT-T------------------T----CTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237737  8 -   7961872 C---------AT-T------------------T----CTT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76347  8 -    116970 T---------TT-T------------------T----CTT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               5071  8 +     27962 C---------TC-T------------------T----CCT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4962  8 +      6077 C---------TC-T------------------T----CCT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5055  8 +      5971 C---------TC-T------------------T----CCT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4973  8 +      5932 C---------TC-T------------------T----CCT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3318  8 -      4390 C---------TC-T------------------T----CCT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392755  8 - 209938924 C---------TC-T------------------C----CCT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4921  8 +      5979 C---------TC-T------------------T----CCT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1491  8 -     22275 C---------TC-T------------------T----CCT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8969  8 +     16473 T---------TT-T------------------T----CTT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110087  8 + 121099817 C---------TC-T------------------T----CCT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31654  8 -     47369 C---------TC-T------------------T----CCT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32040  8 -     79414 C---------TC-T------------------T----CCT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28731  8 -     34454 C---------TC-T------------------T----CCT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16132  8 -     22428 C---------TC-T------------------T----CCT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31286  8 -     47109 C---------TC-T------------------T----CCT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239337  8 +   5703754 C---------TC-T------------------T----CTT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8927  8 +     21866 C---------TC-T------------------T----CTT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26637  8 +     27374 C---------AT-T------------------T----CTT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30149  8 +     58920 C---------AT-T------------------T----CTT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16647  8 -     45317 C---------AT-T------------------T----CTT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24305  8 -     42441 C---------AT-T------------------T----CTT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26983  8 -     29113 C---------AT-T------------------T----CTT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30058  8 -     48123 C---------AT-T------------------T----CTT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    49996  8 +     77746 T---------AT-T------------------C----AAT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865251  8 -   1910179 T---------TA-T------------------C----TTC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672331  8 +  18376816 T---------TT-C------------------T----CTT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869462  8 +   3870691 T---------TT-T------------------T----CTT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7823  8 -     97271 T---------TT-T------------------T----CTT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125982  8 +    196729 T---------TT-T------------------T----CTG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645034  8 +  69701581 T---------TT-T------------------T----CTT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392238  8 +   1523678 C---------CT-T------------------T----CTG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15395  8 +     22964 G---------TT-T------------------T----CTT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3817 23 +      5583 T---------TT-TTCTTGGAACAGCTTGACTT-------
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192706  8 +    199430 T---------TT-T------------------C----CTT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106674  8 -    539355 T---------TT-T------------------C----CTT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1751  8 +      9917 C---------TT-T------------------T----CTT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8549  8 +     20590 C---------TT-T------------------T----CTT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354489  7 - 186847797 C----------T-T------------------T----CTT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25145  8 -     33621 T---------TT-T------------------T----CTT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20803  5 -     31044 T---------TC-T------------------T-------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481240  8 -    610378 G---------TT-T------------------T----CCT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22182  8 +     26378 C---------AT-T------------------T----CTT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34858  8 -     78344 C---------AT-T------------------T----CTT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21507  8 +     25722 C---------AT-T------------------T----CTT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29814  8 -     62838 C---------AT-T------------------T----CTT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29858  8 +     46913 C---------AT-T------------------T----CTT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10665  8 -     28527 C---------AT-T------------------T----CTT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31749  8 -     64340 C---------AT-T------------------T----CTT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29787  8 -     63452 C---------AT-T------------------T----CTT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11234  8 +     22490 C---------AT-T------------------T----CTT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4657  8 -      6147 C---------AT-T------------------T----CTT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11570  8 -     13050 C---------AT-T------------------T----CTT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256800  8 -   6242583 C---------AT-T------------------T----CTT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2828  8 +     19340 C---------AT-T------------------T----CTT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174577  8 -    200418 T---------TT-G------------------T----CTT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482639  8 -  10818551 T---------TT-T------------------T----CTT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835467  8 -   4065304 G---------TT-T------------------T----CTT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9487  8 -     70247 T---------TT-T------------------T----CTT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366813  8 -  33153633 T---------TT-T------------------T----CTT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4671  8 -     21056 T---------TT-T------------------T----CTT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183142  8 +   5085361 T---------TT-T------------------T----CTT
i Ursus_maritimus.KK499267.1                             C 0 I 38
s Varecia_rubra.k141_787544                                  26344  8 -     30710 T---------TT-T------------------T----CTT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25251  8 -    147434 T---------TT-T------------------T----CTT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77373  8 +   5488506 T---------TT-T------------------T----GGG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106017  8 -    112863 T---------TT-T------------------T----CTT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175219  8 -    224448 T---------TT-T------------------T----CTT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30176  8 -     86975 T---------TT-T------------------T----CTT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1061  6 -      1899 G---------TT-C------------------T----T--
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            2097  8 +      2126 T---------TT-T------------------T----CTT
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116925 18 +    313613 I
e Noctilio_leporinus.NocLep_scaffold_7894                   128981  0 -    149072 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Condylura_cristata.JH655891.1                           35808222 16 +  53390261 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6533 16 +     36723 G--------AAA-GAGC----TTGACTTC
s Acinonyx_jubatus.LLWD01001279.1                           813957 15 +   1699592 G--------GAA-CAGC----TTGA-TTC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26288 10 +     63021 C---------GA-CA---------GCTTC
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416414 16 +  29979442 G--------GAA-CAGT----TTGACTTC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216753 16 +    347723 G--------GAA-CAGC----TTGACTTC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19598 12 -     61208 -------------GAGC----ATGACTTC
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49181 16 +     53615 G--------AAG-CAGC----TTGACTTC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1212 16 +     13857 G--------AAG-CAGC----TTGACTTC
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17763 16 -     21945 G--------AAG-CAGC----TTGACTTC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19448 16 +     32033 G--------AAG-CAGC----TTGACTTC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73281 16 -     84148 G--------AAA-CAGC----TTGACTTC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45520 16 -     78289 G--------AAA-CAGC----TTGACTTC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             44959 16 +     55831 G--------AAA-CAGC----TTGACTTC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43409 16 -     64179 G--------AAA-CAGC----TTGACTTC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            516 16 -      3959 G--------AAA-CAGC----TTGACTTC
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42034 16 +     45454 G--------AAA-CAGC----TTGACTTC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47683 16 +     70886 G--------AAA-CAGC----TTGACTTC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9856 16 +     30854 G--------AAA-CAGC----TTGACTTC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             33990 16 +     42133 G--------AAA-CAGC----TTGACTTC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586423 16 +   2318259 A--------AGA-CAGT----TTGTCTTC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178213 16 -    412891 G--------GGA-CAGC----TCGACGTC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51529 16 -     68529 A--------AGG-CAGT----TTGTCTTC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2248 16 +     17741 G--------CAA-CAGC----TTGACGTC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2873 16 -     15923 G--------CAA-CAGT----TTGACGTC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673155 16 +   5030052 G--------CAA-CAGC----TTGACGTC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3149 16 -     16391 G--------CAA-CAGC----TTGACGTC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2708 16 -     17186 G--------CAA-CAGC----TTGACGTC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17224 16 -     32367 G--------GAA-TGAC----TTGAGTTC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21285 16 -     45910 G--------AAA-CAGC----TTGACTTC
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6479 16 -     15198 G--------GGA-CAGG----TCGACTCC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275746 16 +  21539123 G--------AAA-CAGC----TTGACTTC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11914 16 +     48076 G--------AAA-CAGC----TTGACTTC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7049 16 -     28759 G--------AAA-CAGC----TTGACTTT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34603 16 +     44353 G--------AAA-CAGC----TTGACTTC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              49974 16 -     71267 G--------AAA-CAGC----TTGACTTC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24032 16 -     33135 G--------AAA-CAGC----TTGACTTT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7312 16 +     11645 G--------GAA-CAGC----TTGACTTC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7320 16 -     19611 G--------GAA-CAGC----TTGACTTC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964557 16 -  23207421 G--------GAA-CAGT----TTGACTTC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1057 16 -     25979 G--------GAA-CAGT----TTGACTTC
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87430 16 +    124022 A--------AGA-CAGT----TTGTCTTC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     22972 16 +    288883 A--------AGA-CAGT----TTGTCTTC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357362 16 +  48749331 A--------AGA-CAGT----TTGTCTTC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      755926 16 +   1948126 A--------AGA-CAGT----TTGTCTTC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546068 16 -  45695690 A--------AGA-CAGT----TTGTCTTC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531083 16 -   4408762 A--------AGA-CAGT----TTGTCTTC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8841 16 +     28062 G--------CAG-CAGC----TTGGCTTC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44135 16 -     91139 G--------CAG-CAGC----TTGGCTTC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21661 16 +     95584 G--------CAG-CAGC----TTGGCTTC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21574 16 +    119600 G--------CAG-CAGC----TTGGCTTC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11228 16 +     18648 G--------CCA-CAGC----CTGACTTC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10744 16 -     13885 G--------CAA-CAGC----TTGACTTC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2831 16 -      8861 G--------CAA-CAGC----CTGACTTC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455223 16 + 189096842 G--------CAA-CAGC----CTGACTTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2746 16 +      8664 G--------CAA-CAGC----CTGACTTC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632047 16 +  17673402 G--------GAA-CAGT----TTGACTTC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666334 16 +   7040546 G--------GAA-CAGT----TTGACTTC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1209992 16 +   1652518 G--------GAA-CAGT----TTGACTTC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506394 16 +  60362399 G--------GAA-CAGC----TTGACTTC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10030 16 -     23171 G--------GAA-CAGC----TTGACTTC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223373 16 +   9314153 G--------GAA-CAGC----TTGACTTC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616508 16 +  59632846 G--------GAA-CAGC----TTGACTTC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108089 16 -  63665305 G--------GAA-CAGC----TTGACTTC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410152 16 -  46296322 A--------GGA-CAGT----TTGTCTTC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592426 16 +  44709034 A--------GGA-CAGT----TTGTCTTC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    580 15 -      1607 G--------GAA-CAGC----TTGAC-TC
i Capromys_pilorides.CapPil_scaffold_762519              I 3 C 0
s Carlito_syrichta.NW_007259797.1                           271535 16 +    496798 G--------GAA-CAAC----TTAACTTC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1338 16 +      9923 G--------GGA-CTGC----TCGACTTC
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28719 16 -     39886 G--------GAA-CAGC----TTGACTTC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80622 16 -    217609 G--------GAA-CAAT----TTGCCTTC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997469 15 +  23392119 t--------gaa-cagg----tTGGT-TC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000910 15 +  23407841 t--------gaa-cagg----tTGGT-CC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       63989 15 -     66877 T--------GAA-CAGG----TTGGT-TC
i Cavia_tschudii.CavTsc_scaffold_23560                   I 8 C 0
s Cebuella_niveiventris.k141_592277                           6143 16 -     12580 G--------CCA-CAGC----CTGACTTC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44201 16 +     53515 G--------CCA-CAGC----CTGACTTC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373971 14 -  26074798 G--------TA---AGC----TTGACTTC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9025 14 -     34880 G--------TA---AGC----TTGACTTC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68121 14 -     89041 G--------TA---AGC----TTGACTTC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3496 16 -      5494 G--------GAA-CAAC----TTAACTTC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493242 16 -  27778364 G--------GAA-CAGC----TTGACTTC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20075 16 +     27315 G--------GAA-CAGC----TTGACTTC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142328 16 -   4669795 G--------AAA-CAGC----TTGACTTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46067 16 +     47900 G--------AAA-CAGC----TTGACTTC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1500 16 -     14410 G--------AAA-CAGC----TTGACTTC
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45884 16 -    148725 G--------AAA-CAGC----TTGACTTC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28095 16 -     40656 G--------AAG-CAGC----TTGACTTC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8059 16 +     20796 G--------AAG-CAGC----TTGACTTC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13177 16 -     17524 G--------AAG-CAGC----TTGACTTC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28900 16 -     34525 G--------AAG-CAGC----TTGACTTC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12680 16 -     25376 G--------AAG-CAGC----TTGACTTC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365267 16 -  39242232 G--------AAG-CAGC----TTGACTTC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  270994 16 +  21565898 G--------AAG-CAGC----TTGACTTC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33362 16 -     45857 G--------AAG-CAGC----TTGACTTC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28263 16 -     32606 G--------AAG-CAGC----TTGACTTC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4425 16 +      8499 G--------AAG-CAGC----TTGACTTC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26821 16 +     70610 G--------AAG-CAGC----TTGACTTC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23782 16 +     36323 G--------AAG-CAGC----TTGACTTC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13725  1 -     19938 ----------------------------C
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31685 16 -     33796 G--------GAA-CAGC----TTGACTTC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6199 16 -     15404 G--------GAA-CAGC----TTGACTTC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                             9948 16 -     32913 G--------CAA-CTGC----TTGACTTC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20361 16 -     40346 G--------CAA-CTGC----TTGACTTC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20616 16 +    216457 G--------CAA-CTGC----TTGACTTC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20405 16 +     39636 G--------CAA-CTGC----TTGACTTC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239799 15 -   2543920 g--------gga-tagC----TTGAC-TT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1946120                           5081 16 +      5346 G--------CAG-CCGC----CTGACTTT
i Chiropotes_albinasus.k141_1946120                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43472 16 -    112038 G--------CAG-CAGC----TTGGCTTC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9023 16 +     34062 G--------CAG-CAGC----TTGGCTTC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344683 16 +  18827391 G--------AAG-CAGC----TTGACTTC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11225 16 -     44032 G--------AAG-CAGC----TTGACTTC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306008 16 - 135778131 G--------AAG-CAGC----TTGACTTC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_70559                 15857  1 +     15858 ----------------------------C
i Choloepus_didactylus.ChoDid_scaffold_70559             C 0 N 0
s Choloepus_hoffmanni.KN194906.1                            607432  1 -    839153 ----------------------------C
i Choloepus_hoffmanni.KN194906.1                         C 0 I 18
s Chrysochloris_asiatica.ChrAsi_scaffold_2783671               373 16 +       421 G--------AAA-CAGC----TTGATCTT
i Chrysochloris_asiatica.ChrAsi_scaffold_2783671         C 0 N 0
s Colobus_angolensis.KN981557.1                             410413 16 -   2368649 G--------AAA-CAGC----TTGACTTC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380294 16 - 200372422 G--------AAA-CAGC----TTGACTTC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3851 16 -     84244 G--------AAA-CAGC----TTGACTTC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3818 16 -      8242 G--------AAA-CAGC----TGGACCTC
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 45248 10 -     83289 G---------AA-CA---------ACTTC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213115876 10 - 224834208 G---------AG-CA---------ACTTC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10856 16 +     12657 G--------GAT-CAGC----TCAAGTTT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5406 15 +     87169 G--------GAA-CAGC----TTGA-TTC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646454 16 -   1526836 G--------GAA-CAGC----TTGATTTC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19649 15 +     50838 G--------GAA-CAGC----TTGAC-TC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5379 15 +     36344 G--------AAA-CAGC----TTGAC-TC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29163 15 +     75252 G--------GAA-CAGC----TTGAC-TC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111076  1 -   2246927 ----------------------------C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293607 16 +  12879189 G--------GAA-CAAT----TTGACTTC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18632965 16 -  35494412 G--------AAA-CGGT----TTGGCTTC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866329 16 -  20541912 G--------GGA-CAGC----TTGACTCC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665526 16 -   1390856 G--------GAA-CAGC----TTGACTTC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140312 16 -    198055 G--------GAA-CAGC----TTGACTTC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99878 15 -    115145 G--------GGA-TAGC----TTGGC-TC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951618 16 -  37912305 G--------GAA-CAGC----TTGACTTT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6549 16 -     10735 G--------GAA-CAGC----TTGACTTT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856566 16 - 111700974 A--------GAA-CAGC----TGGACCTC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7316 16 +     19438 t--------gaa-caGC----TTGACTTC
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240788 16 -    607251 A--------AGA-CAGT----TTGTCTTC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226799 15 +  10337057 G--------GAA-CAGC----T-AACTTC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          32208  9 +    110024 G---------AA-CA---------ATTT-
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           14176  9 +     18970 G---------AA-CA---------ATTT-
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917152 16 +  41312741 G--------GAA-CAGC----TTGTCTTC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12579930  2 +  14770903 ---------------------------TC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042451 18 -   4378816 t--------gaa-CATT--CTTGGACTTC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376389 18 +  39960074 t--------gaa-CATT--CTTGGACTTC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412371 18 -    498745 t--------gaa-catt--CTTGGACTTC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667055 16 +   7059049 A--------GGG-CATT----TTGATTTA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264219 16 +  21539334 G--------AAG-CAGC----TTGACTTC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72171 16 -    133382 G--------GAG-CAGT----TTGACTTC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              757 16 -      1072 G--------GAG-CAGT----TTGACTTC
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 C 0
s Eulemur_albifrons.k141_51491                               15826 16 -     24895 G--------GAA-CAGC----TTGAATTA
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43536 16 -     70999 G--------GAA-CAGC----TTGAATTA
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87506 16 +    112731 G--------GAA-CAGC----TTGAATTA
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44068 16 +     68309 G--------GAA-CAGC----TTGAATTA
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54393 16 -     65740 G--------GAA-CAGC----TTGAATTA
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25025 16 -     75513 G--------GAA-CAGC----TTGAATTA
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49220 16 -     97555 G--------GAA-CAGC----TTGAATTA
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            5944 16 +     30972 G--------GAA-CAGC----TTGAATTA
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43664 16 -     52037 G--------GAA-CAGC----TTGAATTA
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60067 16 -    111500 G--------GAA-CAGC----TTGAATTA
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247867 15 - 206538554 G--------GAA-CAGC----TTGA-TTG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117653 15 - 205367284 G--------GAA-CAGC----TTGA-TTG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28750 15 -     30238 G--------GAA-CAGC----TTGA-TTC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923026  6 -   3816255 ----------------------TGAC-TC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126657 16 -    137831 A--------AAA-CAGC----CTGACTTC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10202 16 +     22493 A--------AAA-CAGC----CTGACTTC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22272 16 -     32986 A--------AAA-CAGC----CTGACTTC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2211 16 -     28519 G--------GAA-CAGC----TTGACTTC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92495 16 -     95226 A--------AGA-CAGT----TTGTCTTC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2351 16 -      6791 G--------AAA-TGGC----TTGACTTC
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6836 16 -      8343 G--------AAA-CAGC----TTGACTTC
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255849 16 - 186649187 G--------AAA-CAGC----TTGACTTC
i Gorilla_gorilla.LT578341.1                             C 0 I 14
s Graphiurus_murinus.GraMur_scaffold_10447                    3419 16 -     78134 G--------AAA-TAGC----TTTACTTC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15751 16 -     40692 G--------GAA-CAGC----TTGACTGC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37153 16 +     49394 G--------GAA-CAGC----TTGACTGC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62021 16 -     66874 G--------GAA-CAGC----TTGACTGC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10895 16 -     42923 G--------GAA-CAGC----TTGACTGC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17894 16 -     53142 G--------GAA-CAGC----TTGACTGC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31840 15 -    327341 G--------GAA-CAGC----TTGA-TTC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10170 16 +     48891 A--------GGA-CAGT----TTGTCTTC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933446  6 -  22651954 ----------------------tgaC-TC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1283 16 +      8654 G--------GAA-CTGC----TTGATGTT
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8675 16 -     36432 G--------GAA-CAGT----TTGACTTC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552656 16 -   1711038 G--------GAA-CAGC----TTGACTTC
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2095 16 -      2730 T--------GAA-CAGC----TTGACTTC
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143860 16 -    630532 G--------ACA-CAGC----TTGACTTC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71234 15 +     83186 G--------GAA-CAGC----TTGA-TTC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72861 23 +    143317 TGCGGGGGGGAA-CAGC----TTGAC-TC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6894 16 +     12352 G--------AAA-CAGC----TTGACTTC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14078 16 +     55766 G--------AAA-CAGC----TTGACTTC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053678 16 + 191637585 G--------AAA-CAGC----TTGACTTC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802556 16 +  11177569 G--------AAA-CAGC----TTGACTTC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8189 15 -    135385 G--------GAA-CAGC----TTGAC-TT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387892 16 +   7955117 G--------GAA-TGGC----TTGACTTC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3455 16 +     11955 G--------GAA-CAGC----TTGACTTC
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11066 16 -     16823 A--------GAA-CAGT----TTGACTTC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241129 12 +   9596543 -------------GAGC----TTGACTTC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72906 16 -     97402 G--------GAA-AAGT----TTGACTTC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44297 16 +    110728 G--------AAA-CAGC----TTGACTTC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64243  2 -     65777 ---------------------------TC
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760548 16 +  30322482 G--------GAA-CAGC----TTGACTGC
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5204 16 -     13097 G--------CAG-CCGC----TTGACTTT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           4958 16 +      5940 G--------CAG-CCGC----TTGACTTT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4781 16 -      5717 G--------CAG-CCGC----TTGACTTT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11167 16 -     11567 G--------CAA-CAGC----TTGACTTC
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12548 16 -     12945 G--------CAA-CAGC----TTGACTTC
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10060 16 +     29618 G--------GAA-CAGC----TAGACTTC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10056 16 +     31569 G--------GAA-CAGC----TAGACTTC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10066 16 +     24756 G--------GAA-CAGC----TAGACTTC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10066 16 +     16388 G--------GAA-CAGC----TAGACTTC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814546 16 -   3914936 G--------GAA-CAGC----TTGACTTC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     19191 20 +     24238 t--------aaa-ctgtactttggaaatt
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 18
s Lipotes_vexillifer.KE559953.1                             342251 16 +    662738 G--------GAA-CAGT----TTGACTTC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335213 16 -   1826925 G--------AAA-CAGC----TTGACTTC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12355 16 +     19643 G--------AAA-CAGC----TTGACTTC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046025 16 -   6120653 G--------AAA-CAGC----TTGACTTC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39085952 16 +  43346337 G--------GAA-CAGC----ACGCCTTC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615663 16 +  59628241 G--------GGA-CAGC----TTGACTTC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46602 16 -     61512 G--------AAA-CAGC----TTGACTTC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374264 16 -  60120075 G--------AAA-CAGC----TTGACTTC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26532 16 +     30207 G--------AAA-CAGC----TTGACTTC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1370 16 -      5035 G--------AAA-CAGC----TTGACTTC
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26485 16 +     30527 G--------AAA-CAGC----TTGACTTC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37661 16 -     50087 G--------AAA-CAGC----TTGACTTC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47405 16 +     51645 G--------AAA-CAGC----TTGACTTC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416608 16 - 187317192 G--------AAA-CAGC----TTGACTTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400838 16 +  25927173 G--------AAA-CAGC----TTGACTTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50010 16 -     62418 G--------AAA-CAGC----TTGACTTC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2541 16 +     14901 G--------AAA-CAGC----TTGACTTC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46482 16 +     59329 G--------AAA-CAGC----TTGACTTC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272390 16 +    668171 G--------AAA-CAGC----TTGACTTC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1028 16 -      5049 G--------AAA-CAGC----TTGACTTC
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4188 16 +     17132 G--------AAA-CAGC----TTGACTTC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224284 16 -    270270 T--------GAA-CAGC----TTGACTTC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323678 16 +  24302211 G--------AAA-CAGC----TTGACTTC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358509 16 -    752769 G--------AAA-CAGC----TTGACTTC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674595 16 -    737560 G--------GAG-CAAC----TTGACTTC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221895 16 +    317179 G--------GAG-CAAC----TTGATTTC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502106 16 +  40650429 G--------GAA-TGGC----TTGACTTC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151438 16 +    207569 G--------GAA-CAGC----TGGACTTC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27267 16 -     74585 G--------GAA-TAGC----TTGACTTC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 51189 10 -    140813 G---------AA-TA---------ACTTC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17430260 10 +  29670104 G---------AG-CA---------ACTTC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88535 16 +     93471 G--------GAA-CAGT----TTGACTTC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11329 16 +     17804 G--------CCA-CAGC----CTGACTTC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11829 16 -     12984 G--------CCA-CAGC----CTGACTTC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20145 16 -     26561 G--------CCA-CAGC----CTGACTTC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985898 16 +  93316391 G--------GAA-CAGC----TTGACTTC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47740 16 +    145209 A--------GAC-CAGC----TGGACCTC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186123 16 +    200668 G--------GGA-CAGC----TTGGCTTC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15963680  9 +  27267610 G---------AG-CA---------ATTT-
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364272 16 -   8254450 G--------GAA-CAGC----TTGACTTC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43179 16 -     48117 G--------GAA-CAGC----TTGACTTC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23714 16 -     27822 G--------AAG-CAGC----TTGACTTC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9557 16 +     27589 G--------GAA-CAGC----TTGACTTC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53681 16 -     62432 G--------GAA-CAGC----TTGACTTC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360640 16 +    437263 G--------GAA-CGGT----TTGGCTTC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180355 16 +    366855 G--------GAA-CAGC----TTGACTTC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26615 16 -     82753 A--------AGA-CAGT----TTGTCTTC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19573 15 -     63510 G--------GAA-CAGC----TTGA-TTC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40214  2 +     47283 ---------------------------TC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35595295 10 + 120012414 G---------AG-CA---------ACTTC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41688521 10 + 129401213 G---------AG-CA---------ACTTC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_spretus.CM004101.1                                  39497815 10 + 130317789 G---------AG-CA---------ACTTC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85255 16 -     86153 G--------CAA-TGGC----TTGACCTC
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356173 16 +  14710649 G--------GAA-CAGC----TTGACTTC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64164 15 +     67721 G--------GAA-CAGC----TTGAT-TC
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794494  2 +  10118263 ---------------------------TT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388668  2 +   6019432 ---------------------------TT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384694  2 +   4330536 ---------------------------TT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3489  1 +     18357 ----------------------------T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120849  1 +    130748 ----------------------------C
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947769 16 +   3037898 t--------aaa-caac----ctgacttc
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30370 16 +     34575 G--------AAA-CAGC----TTGACTTC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233306 16 -   7148211 G--------GAA-CGGT----TTGACTTC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   128981  4 -    149072 -------------------------CTTC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54786 16 -    132029 G--------AAA-CAGC----TTGACTTC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10881 16 -     16345 G--------AAA-CAGC----TTGACTTC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16766 16 +     22201 G--------AAA-CAGC----TTGACTTC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8414987 16 -  22158432 G--------AAA-CAGC----TTGACTTC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27164 16 -     54323 G--------AAA-CAGC----TTGACTTC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199259 16 +   9404916 G--------GAA-CAGC----TTGACTTC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639252 16 + 196305487 G--------AAA-CAGC----CTGACTTC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1855 16 -      9413 G--------AAA-CAGC----CTGACTTC
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566635 16 - 199412804 G--------AAA-CAGC----CTGACTTC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557943 16 -   3988456 a--------taa-tacc----tCGACTTT
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056255 15 -  11899542 g--------gaa-CAGC----TTGAC-TC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1452976 16 +   2017862 G--------GAA-CAGC----TTCACTTC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437384 16 -    630418 A--------AGA-CAGT----TTGTCTTC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15579 16 +    150152 A--------AGA-CAGT----TTGTTTTC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    93995  4 -    140218 ------------------------TTTT-
i Ondatra_zibethicus.OndZib_scaffold_7387                I 2 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    4422 10 -     41509 G---------AA-CA---------GCTTC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103708 16 +  10937097 G--------GAA-CGGT----TTGACTTC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                735 16 +     11607 A--------GAA-CAGC----TTGATTTC
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107104713 20 - 174332312 g--------aat-ttgcatttttgaactt
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 1176
s Otocyon_megalotis.JAEUCK010005147.1                        40302 16 +    559221 G--------GAA-CAGC----TTGACTTC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41804 16 -     51505 A--------AAA-CAGC----CTGACTTC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354808 16 +   1103335 a--------aaa-cagc----ctgaCTTC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405290 16 -  44047080 A--------GGA-CAGT----TTGTCTTC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5809 16 +     17875 A--------GGA-CAGT----TTGTCTTC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1473877 16 - 189151597 G--------AAA-CAGC----TTGACTTC
i Pan_troglodytes.CM009242.2                             C 0 I 14
s Panthera_onca.PanOnc_flattened_line_3271                   25573 15 -    230217 G--------GAA-CACC----TTGA-TTC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462899 15 -  18783137 G--------GAA-CAGC----TTGA-TTC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973558 15 +   8748460 G--------GAA-CAGC----TTGA-TTC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616818 16 +   2937107 A--------AGA-CAGT----TTGTCTTC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244687 16 - 183742232 G--------AAA-CAGC----TTGACTTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            10972 16 +     21308 G--------AAA-CAGC----TTGACTTC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293715 16 -  20919399 G--------AAA-CAGC----TTGACTTC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23620 16 -     27687 G--------AAA-CAGC----TTGACTTC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     291 16 +     10553 G--------AAA-CAGC----TTGACTTC
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   251 16 -     10386 G--------AAA-CAGC----TTGACTTC
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16154 15 +     78924 G--------GAA-CAGC----TTGA-TTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28135 16 +     31479 G--------AAA-CAGC----CTGACTTC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20503 16 -     24908 G--------AAA-CAGC----CTGACTTC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2959 16 +      9367 G--------GAA-CAGC----TTTACTTC
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         247632 10 +  18517816 G---------AA-CA---------ACTTC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     32998 15 -     56120 G--------GAA-CAGC----TTGAC-TC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5234 16 -     63832 G--------GAA-CGGT----TTGACTTC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3801 16 +     55023 G--------AAA-CAGC----TTGACTTC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3339 16 -     89929 G--------AAA-CAGC----TTGACTTC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3929 16 +     40849 G--------AAA-CAGC----TTGACTTC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255604 16 +  14605196 G--------AAA-CAGC----TTGACTTC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5067  2 +     22231 ---------------------------TC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65839 16 +    207309 G--------CAA-CAGC----TCGGCTTC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6931 16 -     25401 G--------CAA-CAGC----TCGGCTTC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32675 16 +     58159 G--------CAA-CAGC----TCGGCTTC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         32951 16 +     63561 G--------CAA-CAGC----TCGGCTTC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32711 16 +     51148 G--------CAG-CAGC----TCGGCTTC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557681 16 -   4542175 G--------CAA-CAGC----TCGGCTTC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32695 16 +     51125 G--------CAG-CAGC----TCGGCTTC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2251 16 +     19503 G--------GAA-CAGT----TTGACTTC
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9113 16 +     39866 G--------CAA-CTGC----TTGACTTC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4195 16 -      9282 G--------CAA-CTGC----TTGACTTC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43599 16 -     87950 G--------CAA-CTGC----TTGACTTC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     43993 16 -     88961 G--------CAA-CTGC----TTGACTTC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8691 16 -     39403 G--------CAA-CTGC----TTGACTTC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43642 16 +     87928 G--------CAA-CTGC----TTGACTTC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8690 16 -     60166 G--------CAA-CTGC----TTGACTTC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15627 16 -     67232 G--------CAA-CTGC----TTGACTTC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43543 16 -     90634 G--------CAA-CTGC----TTGACTTC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45010 16 +     89403 G--------CAA-CTGC----TTGACTTC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   178990 16 - 189387572 G--------AAA-CAGC----TTGACTTC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193807 16 -   9816681 G--------AAA-CAGC----TTGACTTC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              28949 16 +     69807 G--------AAA-CAGC----TTGACTTC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46130 16 -     80239 G--------AAA-CAGC----TTGACTTC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5274 16 +      7663 G--------GAA-CTGT----TTGATGTC
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983696 16 +   4620579 G--------GAA-CAGC----TTGACTGC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567206 16 -   2598838 G--------GAA-CAGC----TTGACTTC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4844 16 -      7103 G--------GAA-CAGC----TTGACTTC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5441 16 -     11706 G--------GAA-CAGC----TTGACTTC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9178 16 -     30655 G--------GAA-CAGC----TTGACTTC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35492 16 +     46564 G--------GAA-CAGC----TTGACTTC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95771 16 -     98465 G--------GAA-CAGC----TTGACTTC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9410 16 +     35169 G--------GAA-CAGC----TTGACTTC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            38702 10 +     52041 G---------AA-TA---------ACTTC
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53249 16 -     66298 g--------aaa-CAGC----TTGACTTG
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5747 16 -     18639 G--------GAA-CAGC----TTGACTTC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841856 16 -  28871421 t--------gaa-cAGC----TTGACttc
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538371 16 -   4952924 t--------gaa-cAGC----TTGACTTC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100216 15 +  38429054 G--------GAA-CAGC----TTGA-TTC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28316 16 +     91421 G--------AAA-CAGC----TTGACTTC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154800 16 -   7812017 G--------AAA-CAGC----TTGACTTC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9173 16 +     72585 G--------AAA-CAGC----TTGACTTC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54298 16 +     55069 A--------AGA-CAGT----TTGTCTTC
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rattus_norvegicus.chr16                                 37023988 10 -  90668790 G---------AG-CA---------ACTTG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915821 16 +   3329780 G--------GAA-CAAC----TTGATTTC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2903 16 +      7119 G--------AAA-CAGC----TTGACTTC
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123518 16 + 195417433 G--------AAA-CAGC----TTGACTTC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237745 16 -   7961872 G--------AAA-CAGC----TTGACTTC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76355 16 -    116970 T--------GAA-CAGC----TTGACTTC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               5079 16 +     27962 G--------CAG-CCGC----CTGACTTT
i Saguinus_bicolor.k141_1429097                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             4970 16 +      6077 G--------CAG-CCGC----TTGACTTT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5063 16 +      5971 G--------CAG-CCGC----TTGACTTT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               4981 16 +      5932 G--------CAG-CCGC----TTGACTTT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3326 16 -      4390 G--------CAG-CCGC----TTGACTTT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392763 16 - 209938924 G--------CAG-CCGC----CTGACTTT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                4929 16 +      5979 G--------CAG-CCGC----TTGACTTT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1499 16 -     22275 G--------CAG-CCGC----TTGACTTT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        8977 16 +     16473 A--------AGA-CAGT----GTGTCTTC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110095 16 + 121099817 G--------CAA-CAGC----TTGACTTC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31662 16 -     47369 G--------CAA-CAGC----TTGACTTC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32048 16 -     79414 G--------CAA-CAGC----TTGACTTC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28739 16 -     34454 G--------CAA-CAGC----TTGACTTC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16140 16 -     22428 G--------CAA-CAGC----TTGACTTC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31294 16 -     47109 G--------CAA-CAGC----TTGACTTC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239345 14 +   5703754 G--------TA---AGC----TTGACTTC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8935 14 +     21866 G--------TA---AGC----TTGACTTC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26645 16 +     27374 G--------AAA-CAGC----TTGACTTC
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30157 16 +     58920 G--------AAA-CAGC----TTGACTTC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16655 16 -     45317 G--------AAA-CAGC----TTGACTTC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24313 16 -     42441 G--------AAA-CAGC----TTGACTTC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     26991 16 -     29113 G--------AAA-CAGC----TTGACTTC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30066 16 -     48123 G--------AAA-CAGC----TTGACTTC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    50004 10 +     77746 G---------AA-TA---------ACTTC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865259 16 -   1910179 A--------GAA-CAGC----TTGACTTC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672339 16 +  18376816 T--------GAT-CAAC----TTGAGTTT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869470 16 +   3870691 G--------GAA-TGGC----TTGATTTC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7831 16 -     97271 G--------GAA-CAGT----TTGACTTC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             125990 15 +    196729 G--------GAA-CAGC----TTAA-TTC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645042 15 +  69701581 G--------GAA-CAAT----TTCCCTT-
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392246 16 +   1523678 G--------AAA-CAGC----TTGGCTTC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15403 16 +     22964 G--------GAA-CAGC----TTGACTTC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3840  1 +      5583 ----------------------------C
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192714 16 +    199430 G--------GAA-CAGT----TTGACTTC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106682 16 -    539355 G--------GAA-CAGT----TTGACTTC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1759 16 +      9917 G--------GAA-CAGC----TTAACTTC
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8557 16 +     20590 G--------GAA-CAGC----TTAACTTC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354496 16 - 186847797 G--------AAA-CAGC----TTGACTTC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25153 15 -     33621 G--------GAA-CAAC----TTGAC-TT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20808  1 -     31044 ----------------------------C
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481248 16 -    610378 G--------GGA-CAGC----TTGACTTC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22190 16 +     26378 G--------AAA-CAGC----TTGACTTC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34866 16 -     78344 G--------AAA-CAGC----TTGACTTC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21515 16 +     25722 G--------AAA-CAGC----TTGACTTC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29822 16 -     62838 G--------AAA-CAGC----TTGACTTC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29866 16 +     46913 G--------AAA-CAGC----TTGACTTC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10673 16 -     28527 G--------AAA-CAGC----TTGACTTC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31757 16 -     64340 G--------AAA-CAGC----TTGACTTC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29795 16 -     63452 G--------AAA-CAGC----TTGACTTC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11242 16 +     22490 G--------AAA-CAGC----TTGACTTC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4665 16 -      6147 G--------AAA-CAGC----TTGACTTC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11578 16 -     13050 G--------AAA-CAGC----TTGACTTC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256808 16 -   6242583 G--------AAA-CAGC----TTGACTTC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2836 16 +     19340 G--------AAA-CAGC----TTGACTTC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174585 16 -    200418 G--------GAA-TAGT----TTGACTTC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482647 16 -  10818551 G--------GAA-GAGC----TTGACTTC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835475 17 -   4065304 G--------GAAAAAGA----TGGGCTTC
i Tupaia_chinensis.KB320699.1                            C 0 I 23
s Tupaia_tana.TupTan_flattened_line_394                       9495 17 -     70247 G--------GAAAAAGA----TGGGCTTC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366821 16 -  33153633 G--------GAA-CGGT----TTGACTTC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4679 16 -     21056 A--------TAA-CAGC----TTGACCAC
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183188 16 +   5085361 g--------gAA-CAGT----TTGACTTC
i Ursus_maritimus.KK499267.1                             I 38 C 0
s Varecia_rubra.k141_787544                                  26352 16 -     30710 G--------AAA-TAGC----TTGACTTC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25259 16 -    147434 G--------AAA-TAGC----TTGACTTC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77381 16 +   5488506 G--------GAA-CAGT----TTGACTTC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106025 16 -    112863 G--------GAA-CAGC----TTGACTTC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175227 16 -    224448 G--------GAA-TGGC----TTGACTTT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30184 16 -     86975 G--------GAA-CAGC----TTCACTTC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1067 12 -      1899 -------------CAGT----TGGACTTC
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            2105 16 +      2126 G--------GAA-CAGT----TTGACTTC
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116925 18 +    313613 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Condylura_cristata.JH655891.1                           35808222 16 +  53390261 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6549 20 +     36723 TGAAC-AT-T-T-TT--T-GAACT---TAT
s Acinonyx_jubatus.LLWD01001279.1                           813972 19 +   1699592 TGAGC-AT-T-T-TT--C-TAATA---GA-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 5
s Acomys_cahirinus.AcoCah_scaffold_21377                     26298 15 +     63021 TAAGT-AT-AAT--T--C-AA-------A-
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 5
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416430 19 +  29979442 Tgagc-at-t-t-tt--c-aaata---ta-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 5
s Ailurus_fulgens.LNAC01001112.1                            216769 19 +    347723 TGAgc-at-t-t-tt--g-taata---ta-
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 5
s Allactaga_bullata.AllBul_scaffold_20030                    19610 15 -     61208 TGAGT-AT-T-T-TT--C-AAA--------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49197 18 +     53615 TGAGC-GT-T-T-TT--T-GAACA----A-
i Allenopithecus_nigroviridis.k141_3755588               C 0 I 5
s Allochrocebus_lhoesti.k141_3412094                          1228 18 +     13857 TGAGC-GT-T-T-TT--T-GAACA----A-
i Allochrocebus_lhoesti.k141_3412094                     C 0 I 5
s Allochrocebus_preussi.k141_1993939                         17779 18 -     21945 TGAGC-GT-T-T-TT--T-GAACA----A-
i Allochrocebus_preussi.k141_1993939                     C 0 I 5
s Allochrocebus_solatus.k141_3554717                         19464 18 +     32033 TGAGC-GT-T-T-TT--T-GAACA----A-
i Allochrocebus_solatus.k141_3554717                     C 0 I 5
s Alouatta_belzebul.k141_1011583                             73297 19 -     84148 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Alouatta_belzebul.k141_1011583                         C 0 I 5
s Alouatta_caraya.k141_1109140                               45536 19 -     78289 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Alouatta_caraya.k141_1109140                           C 0 I 5
s Alouatta_discolor.k141_2561099                             44975 19 +     55831 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Alouatta_discolor.k141_2561099                         C 0 I 5
s Alouatta_juara.k141_1687208                                43425 19 -     64179 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Alouatta_juara.k141_1687208                            C 0 I 5
s Alouatta_macconnelli.k141_1277969                            532 19 -      3959 GGAGC-AT-T-G-TT--T-GAACA---TA-
i Alouatta_macconnelli.k141_1277969                      C 0 I 5
s Alouatta_nigerrima.k141_376068                             42050 19 +     45454 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Alouatta_nigerrima.k141_376068                         C 0 I 5
s Alouatta_palliata.k141_638677                              47699 19 +     70886 GGAGC-AT-T-T-TT--T-GAGCA---TA-
i Alouatta_palliata.k141_638677                          C 0 I 5
s Alouatta_puruensis.k141_251022                              9872 19 +     30854 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Alouatta_puruensis.k141_251022                         C 0 I 5
s Alouatta_seniculus.k141_928287                             34006 19 +     42133 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Alouatta_seniculus.k141_928287                         C 0 I 5
s Ammotragus_lervia.NIVO01071767.1                         1586439 19 +   2318259 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 25
s Anoura_caudifer.AnoCau_scaffold_1412                      178229 19 -    412891 TCAGT-AT-C-T-TT--C-TAACA---TA-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 5
s Antilocapra_americana.AntAmePen_scaffold_21030             51545 19 -     68529 TGAGC-AT-T-C-TT--C-CAACA---TA-
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 25
s Aotus_azarae.k141_887050                                    2264 19 +     17741 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Aotus_azarae.k141_887050                               C 0 I 5
s Aotus_griseimembra.k141_3192254                             2889 19 -     15923 GGCGC-AT-T-T-TT--T-GAACA---TA-
i Aotus_griseimembra.k141_3192254                        C 0 I 5
s Aotus_nancymaae.KZ198451.1                                673171 19 +   5030052 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Aotus_nancymaae.KZ198451.1                             C 0 I 5
s Aotus_trivirgatus.k141_318729                               3165 19 -     16391 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Aotus_trivirgatus.k141_318729                          C 0 I 5
s Aotus_vociferans.k141_1514463                               2724 19 -     17186 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Aotus_vociferans.k141_1514463                          C 0 I 5
s Aplodontia_rufa.AprRuf_scaffold_46868                      17240 19 -     32367 TAAGT-AT-T-G-TT--G-AAGCA---AG-
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 5
s Arctocebus_calabarensis.k141_1364444                       21301 19 -     45910 TGAAT-AT-T-T-CT--T-GAATA---TA-
i Arctocebus_calabarensis.k141_1364444                   C 0 I 5
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6495 19 -     15198 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 13
s Ateles_geoffroyi_b.tarseq_1536                               275762 19 +  21539123 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 5
s Ateles_belzebuth.k141_1572163                              11930 19 +     48076 GGAAC-AT-T-T-TT--T-GAACA---TA-
i Ateles_belzebuth.k141_1572163                          C 0 I 4
s Ateles_chamek.k141_615173                                   7065 19 -     28759 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Ateles_chamek.k141_615173                              C 0 I 4
s Ateles_geoffroyi_a.k141_1283730                              34619 19 +     44353 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Ateles_geoffroyi_a.k141_1283730                          C 0 I 5
s Ateles_marginatus.k141_970259                              49990 19 -     71267 GGAAC-AT-T-T-TT--T-GAACA---TA-
i Ateles_marginatus.k141_970259                          C 0 I 4
s Ateles_paniscus.k141_866194                                24048 19 -     33135 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Ateles_paniscus.k141_866194                            C 0 I 4
s Avahi_laniger.k141_2756659                                  7328 19 +     11645 TGAGC-AT-T-A-TT--T-GAATA---TG-
i Avahi_laniger.k141_2756659                             C 0 I 5
s Avahi_peyrierasi.k141_1823318                               7336 19 -     19611 TGAGC-AT-T-A-TT--T-GAATA---TG-
i Avahi_peyrierasi.k141_1823318                          C 0 I 5
s Balaenoptera_acutorostrata.KI537508.1                    7964573 19 -  23207421 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 25
s Balaenoptera_bonaerensis.DF411050.1                         1073 19 -     25979 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 25
s Beatragus_hunteri.BeaHun_scaffold_7278                     87446 19 +    124022 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 25
s Bison_bison.KN261452.1                                     22988 19 +    288883 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Bison_bison.KN261452.1                                 C 0 I 23
s Bos_indicus.CM003047.1                                  20357378 19 +  48749331 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Bos_indicus.CM003047.1                                 C 0 I 23
s Bos_mutus.JH880303.1                                      755942 19 +   1948126 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Bos_mutus.JH880303.1                                   C 0 I 23
s Bos_taurus.CM000203.6                                   27546084 19 -  45695690 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Bos_taurus.CM000203.6                                  C 0 I 23
s Bubalus_bubalis.KI419123.1                               1531099 19 -   4408762 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Bubalus_bubalis.KI419123.1                             C 0 I 25
s Cacajao_ayresi.k141_96119                                   8857 18 +     28062 -GAGC-AT-T-C-TT--T-GAACA---TG-
i Cacajao_ayresi.k141_96119                              C 0 I 5
s Cacajao_calvus.k141_89051                                  44151 18 -     91139 -GAGC-AT-T-C-TT--T-GAACA---TG-
i Cacajao_calvus.k141_89051                              C 0 I 5
s Cacajao_hosomi.k141_81245                                  21677 18 +     95584 -GAGC-AT-T-C-TT--T-GAACA---TG-
i Cacajao_hosomi.k141_81245                              C 0 I 5
s Cacajao_melanocephalus.k141_619699                         21590 18 +    119600 -GAGC-AT-T-C-TT--T-GAACA---TG-
i Cacajao_melanocephalus.k141_619699                     C 0 I 5
s Callibella_humilis.k141_1233062                            11244 19 +     18648 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Callibella_humilis.k141_1233062                        C 0 I 5
s Callimico_goeldii.k141_1609886                             10760 19 -     13885 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Callimico_goeldii.k141_1609886                         C 0 I 5
s Callithrix_geoffroyi.k119_459277                            2847 19 -      8861 GGGGC-GT-T-T-TT--T-GAACA---TA-
i Callithrix_geoffroyi.k119_459277                       C 0 I 5
s Callithrix_jacchus.pat_scaffold_3                      165455239 19 + 189096842 GGGGC-GT-T-T-TT--T-GAACA---TA-
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 5
s Callithrix_kuhlii.k119_102356                               2762 19 +      8664 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Callithrix_kuhlii.k119_102356                          C 0 I 5
s Camelus_bactrianus.KN276810.1                            7632063 19 +  17673402 AGAGC-AT-T-C-AT--C-TAACA---TA-
i Camelus_bactrianus.KN276810.1                          C 0 I 5
s Camelus_dromedarius.KN272107.1                           4666350 19 +   7040546 AGAGC-AT-T-C-AT--C-TAACA---TA-
i Camelus_dromedarius.KN272107.1                         C 0 I 5
s Camelus_ferus.KB017975.1                                 1210008 19 +   1652518 AGAGC-AT-T-C-AT--C-TAACA---TA-
i Camelus_ferus.KB017975.1                               C 0 I 5
s CanFam4.chr16                                           42506410 12 +  60362399 TGAA--AT-T-T-TT--C-T----------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10046 12 -     23171 TGAA--AT-T-T-TT--C-T----------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223389 12 +   9314153 TGAA--AT-T-T-TT--C-T----------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616524 12 +  59632846 TGAA--AT-T-T-TT--C-T----------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108105 12 -  63665305 TGAA--AT-T-T-TT--C-T----------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410168 19 -  46296322 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Capra_aegagrus.CM003241.1                              C 0 I 25
s Capra_hircus.CM004588.1                                 26592442 19 +  44709034 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Capra_hircus.CM004588.1                                C 0 I 25
s Capromys_pilorides.CapPil_scaffold_762519                    595 19 -      1607 TGAGT-AG-T-T-TT--T-CAATA---TG-
i Capromys_pilorides.CapPil_scaffold_762519              C 0 I 5
s Carlito_syrichta.NW_007259797.1                           271551 19 +    496798 TGAGT-AT-T-T-TT--T-GAATG---GG-
i Carlito_syrichta.NW_007259797.1                        C 0 I 5
s Carollia_perspicillata.CarPer_scaffold_107871               1354 19 +      9923 TGAGC-GC-T-T-TT--C-TAACA---TA-
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 5
s Castor_canadensis.CasCan_scaffold_39952                    28735 17 -     39886 TGAGC-AT-T-T-TT--C-AAATA------
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 5
s Catagonus_wagneri.CatWag_scaffold_2839                     80638 19 -    217609 TGAGC-AT-T-T-TT--T-TAACA---TA-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 13
s Cavia_aperea.AVPZ01000300.1                              4997484 19 +  23392119 TGAGC-AG-T-T-TT--T-CAATA---TA-
i Cavia_aperea.AVPZ01000300.1                            C 0 I 5
s Cavia_porcellus.DS562891.1                               5000925 20 +  23407841 TGAGC-AG-T-T-TT--TCCAATA---TA-
i Cavia_porcellus.DS562891.1                             C 0 I 5
s Cavia_tschudii.CavTsc_scaffold_23560                       64004 19 -     66877 TGAGC-AG-T-T-GT--T-CAATA---TA-
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 5
s Cebuella_niveiventris.k141_592277                           6159 19 -     12580 GCGGC-AT-T-T-TT--T-GAACA---TA-
i Cebuella_niveiventris.k141_592277                      C 0 I 5
s Cebuella_pygmaea.k141_145798                               44217 19 +     53515 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Cebuella_pygmaea.k141_145798                           C 0 I 5
s Cebus_albifrons.Contig27                                  373985 19 -  26074798 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Cebus_albifrons.Contig27                               C 0 I 5
s Cebus_olivaceus.k141_1404781                                9039 19 -     34880 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Cebus_olivaceus.k141_1404781                           C 0 I 5
s Cebus_unicolor.k141_1654760                                68135 19 -     89041 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Cebus_unicolor.k141_1654760                            C 0 I 5
s Cephalopachus_bancanus.k141_1689090                         3512 19 -      5494 TGAGT-AT-T-T-TT--T-GAATG---GG-
i Cephalopachus_bancanus.k141_1689090                    C 0 I 5
s Ceratotherium_simum.JH767749.1                          15493258 19 -  27778364 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Ceratotherium_simum.JH767749.1                         C 0 I 5
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20091 19 +     27315 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 5
s Cercocebus_atys.KQ010504.1                                142344 19 -   4669795 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Cercocebus_atys.KQ010504.1                             C 0 I 5
s Cercocebus_chrysogaster.k141_1522556                       46083 19 +     47900 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Cercocebus_chrysogaster.k141_1522556                   C 0 I 5
s Cercocebus_lunulatus.k141_2500334                           1516 19 -     14410 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Cercocebus_lunulatus.k141_2500334                      C 0 I 5
s Cercocebus_torquatus.k141_2159127                          45900 19 -    148725 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Cercocebus_torquatus.k141_2159127                      C 0 I 5
s Cercopithecus_ascanius.k141_3120866                        28111 18 -     40656 TGAGC-GT-T-T-TT--T-GAACA----A-
i Cercopithecus_ascanius.k141_3120866                    C 0 I 5
s Cercopithecus_cephus.k141_4183004                           8075 18 +     20796 TGAGC-GT-T-T-TT--T-GAACA----A-
i Cercopithecus_cephus.k141_4183004                      C 0 I 5
s Cercopithecus_diana.k141_132293                            13193 18 -     17524 TGAGC-AT-T-T-TT--T-GAACA----A-
i Cercopithecus_diana.k141_132293                        C 0 I 5
s Cercopithecus_hamlyni.k141_566925                          28916 18 -     34525 TGAGC-GT-T-T-TT--T-GAACA----A-
i Cercopithecus_hamlyni.k141_566925                      C 0 I 5
s Cercopithecus_lowei.k141_2101310                           12696 18 -     25376 TGAGC-GT-T-T-TT--T-GAACA----G-
i Cercopithecus_lowei.k141_2101310                       C 0 I 5
s Cercopithecus_albogularis.ctg5                                  365283 18 -  39242232 TGAGC-GT-T-T-TT--T-GAACA----A-
i Cercopithecus_albogularis.ctg5                               C 0 I 5
s Cercopithecus_mona.ctg39                                  271010 18 +  21565898 TGAGC-GT-T-T-TT--T-GAACA----A-
i Cercopithecus_mona.ctg39                               C 0 I 5
s Cercopithecus_neglectus.k141_858615                        33378 18 -     45857 TGAGC-GT-T-T-TT--T-GAACA----A-
i Cercopithecus_neglectus.k141_858615                    C 0 I 5
s Cercopithecus_nictitans.k141_2995370                       28279 18 -     32606 TGAGC-GT-T-T-TT--T-GAACA----A-
i Cercopithecus_nictitans.k141_2995370                   C 0 I 5
s Cercopithecus_petaurista.k141_42573                         4441 18 +      8499 TGAGC-GT-T-T-TT--T-GAACA----A-
i Cercopithecus_petaurista.k141_42573                    C 0 I 5
s Cercopithecus_pogonias.k141_6079                           26837 18 +     70610 TGAGT-GT-T-T-TT--T-GAACA----A-
i Cercopithecus_pogonias.k141_6079                       C 0 I 5
s Cercopithecus_roloway.k141_3012935                         23798 18 +     36323 TGAGC-GT-T-T-TT--T-GAACA----A-
i Cercopithecus_roloway.k141_3012935                     C 0 I 5
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13726 19 -     19938 TGAGC-AG-C-T-TC--C-GGTCA---TA-
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 5
s Cheirogaleus_major.k141_666340                             31701 19 -     33796 GGAGC-AT-T-T-TG--T-GAATA---TA-
i Cheirogaleus_major.k141_666340                         C 0 I 5
s Cheirogaleus_medius.k141_759766                             6215 19 -     15404 GGAGC-AT-T-T-TG--T-GAATA---TA-
i Cheirogaleus_medius.k141_759766                        C 0 I 5
s Cheracebus_lucifer.k141_2312002                             9964 19 -     32913 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Cheracebus_lucifer.k141_2312002                        C 0 I 5
s Cheracebus_lugens.k141_1179667                             20377 19 -     40346 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Cheracebus_lugens.k141_1179667                         C 0 I 5
s Cheracebus_regulus.k141_471822                             20632 19 +    216457 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Cheracebus_regulus.k141_471822                         C 0 I 5
s Cheracebus_torquatus.k141_890198                           20421 19 +     39636 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Cheracebus_torquatus.k141_890198                       C 0 I 5
s Chinchilla_lanigera.JH722012.1                           1239814 19 -   2543920 TGCGC-AG-T-T-TT--T-CAACA---TA-
i Chinchilla_lanigera.JH722012.1                         C 0 I 5
s Chiropotes_albinasus.k141_1946120                           5097 19 +      5346 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Chiropotes_albinasus.k141_1946120                      C 0 I 5
s Chiropotes_israelita.k141_313004                           43488 18 -    112038 A-CAC-AT-T-C-TT--T-GAACA---TA-
i Chiropotes_israelita.k141_313004                       C 0 I 5
s Chiropotes_sagulatus.k141_1113111                           9039 18 +     34062 A-CGC-AT-T-C-TT--T-GAACA---TA-
i Chiropotes_sagulatus.k141_1113111                      C 0 I 5
s Chlorocebus_aethiops.ctg25                                344699 18 +  18827391 TGAGA-GT-T-T-TT--T-GAACA----A-
i Chlorocebus_aethiops.ctg25                             C 0 I 5
s Chlorocebus_pygerythrus.k141_3063162                       11241 18 -     44032 TGAGC-GT-T-T-TT--T-GAACA----A-
i Chlorocebus_pygerythrus.k141_3063162                   C 0 I 5
s Chlorocebus_sabaeus.CM001947.1                            306024 18 - 135778131 TGAGC-GT-T-T-TT--T-GAACA----A-
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 5
s Choloepus_hoffmanni.KN194906.1                            607451 19 -    839153 TGAGC-AG-T-T-TT--T-TAACA---TA-
i Choloepus_hoffmanni.KN194906.1                         I 18 I 5
s Chrysochloris_asiatica.ChrAsi_scaffold_2215791               126 11 -       558 TGAGC-AT-T-T-TT---------------
i Chrysochloris_asiatica.ChrAsi_scaffold_2215791         N 0 I 12
s Colobus_angolensis.KN981557.1                             410429 19 -   2368649 TGAGT-GT-T-A-TT--T-GAACA---TA-
i Colobus_angolensis.KN981557.1                          C 0 I 5
s Colobus_guereza.LG01                                      380310 19 - 200372422 TGAGT-GT-T-T-TT--T-GAACA---TA-
i Colobus_guereza.LG01                                   C 0 I 5
s Colobus_polykomos.k141_906115                               3867 19 -     84244 TGAGT-GT-T-T-TT--T-GAACA---TA-
i Colobus_polykomos.k141_906115                          C 0 I 5
s Condylura_cristata.JH655891.1                           35808238  5 +  53390261 ---------------------Aca---ta-
i Condylura_cristata.JH655891.1                          I 16 I 5
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3834 19 -      8242 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 5
s Cricetomys_gambianus.CriGam_scaffold_14425                 45258 17 -     83289 TGAAT-AT-GAT--T--C-AA--G---CA-
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 5
s Cricetulus_griseus.LT883664.1                          213115886 17 - 224834208 TGATT-CT-AAT--T--C-AA--A---CA-
i Cricetulus_griseus.LT883664.1                          C 0 I 5
s Crocidura_indochinensis.CroInd_scaffold_77846              10872 20 +     12657 TGAGC-AC-T-T-TTC-C-TAAGA---TA-
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 9
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5421 19 +     87169 CGAGC-AT-T-T-TT--C-TAATA---TT-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 5
s Ctenodactylus_gundi.CteGun_scaffold_65                    646470 19 -   1526836 TGAGC-AG-A-T-AT--T-GAATC---TG-
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 5
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19664 19 +     50838 TGAGT-AG-T-T-TT--T-CAATA---TA-
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 5
s Cuniculus_paca.CunPac_flattened_line_7025                   5394 19 +     36344 TGAGA-AG-T-T-TT--T-CAATA---TA-
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 5
s Dasyprocta_punctata.DasPun_flattened_line_15900            29178 19 +     75252 TGAGC-AG-T-T-TT--T-CAATA---TA-
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 5
s Dasypus_novemcinctus.JH564415.1                          2111077 19 -   2246927 TGAGC-CG-T-T-TC--C-TAACA---TA-
i Dasypus_novemcinctus.JH564415.1                        C 0 I 5
s Daubentonia_madagascariensis.ctg71                        293623 19 +  12879189 TGAGC-AT-T-T-TT--T-TAATA---TA-
i Daubentonia_madagascariensis.ctg71                     C 0 I 5
s Delphinapterus_leucas.KZ290073.1                        18632981 19 -  35494412 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Delphinapterus_leucas.KZ290073.1                       C 0 I 25
s Desmodus_rotundus.KZ672289.1                            11866345 19 -  20541912 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Desmodus_rotundus.KZ672289.1                           C 0 I 5
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665542 19 -   1390856 TGAGC-AT-T-T-CT--C-TAACA---TG-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 5
s Diceros_bicornis.DicBicMic_scaffold_5955                  140328 19 -    198055 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 5
s Dinomys_branickii.DinBra_scaffold_10381                    99893 19 -    115145 TGAGC-AG-T-T-CT--T-CAATG---TA-
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 5
s Dipodomys_ordii.KN672350.1                              18951634 17 -  37912305 TGAGC-AT-T-T-TC--C-AAACT------
i Dipodomys_ordii.KN672350.1                             C 0 I 5
s Dipodomys_stephensi.DipSte_scaffold_89095                   6565 17 -     10735 TGAGC-AT-T-T-TC--C-AAACC------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 5
s Echinops_telfairi.JH980293.1                            62856582 20 - 111700974 TGAGC-GT-T-TTTT--C-TAACA---TA-
i Echinops_telfairi.JH980293.1                           C 0 I 5
s Eidolon_helvum.AWHC01266696.1                               7332 19 +     19438 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Eidolon_helvum.AWHC01266696.1                          C 0 I 18
s Elaphurus_davidianus.JRFZ01104969.1                       240804 19 -    607251 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 25
s Elephantulus_edwardii.JH947257.1                         1226814 19 +  10337057 TGAGT-AT-T-T-TC--C-CAACA---TA-
i Elephantulus_edwardii.JH947257.1                       C 0 I 5
s Ellobius_lutescens.LOEQ01008920.1                          32217 17 +    110024 TTATT-CT-AAT--G--C-AA--A---CA-
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 5
s Ellobius_talpinus.LOJH01026522.1                           14185 17 +     18970 TTATT-CT-AAT--T--C-AA--A---CA-
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 5
s Enhydra_lutris.KZ291758.1                               24917168 19 +  41312741 Tgagt-at-t-t-tt--c-taata---ta-
i Enhydra_lutris.KZ291758.1                              C 0 I 5
s Eptesicus_fuscus.JH977646.1                             12579932 19 +  14770903 TGAGC-AT-T-T-TT--C-TGGCA---TA-
i Eptesicus_fuscus.JH977646.1                            C 0 I 5
s Equus_asinus.JREZ01000139.1                              3042469 19 -   4378816 TGAGC-AT-T-T-TT--C-TAATG---TC-
i Equus_asinus.JREZ01000139.1                            C 0 I 5
s Equus_caballus.CM000403.2                               21376407 19 +  39960074 TGAGC-AT-T-T-TT--C-TAATG---TG-
i Equus_caballus.CM000403.2                              C 0 I 5
s Equus_przewalskii.KK951119.1                              412389 19 -    498745 TGAGC-AT-T-T-TT--C-TAATG---TG-
i Equus_przewalskii.KK951119.1                           C 0 I 5
s Erinaceus_europaeus.JH835339.1                           3667071 19 +   7059049 TGAGC-AT-T-T-TT--G-TAATG---TG-
i Erinaceus_europaeus.JH835339.1                         C 0 I 5
s Erythrocebus_patas.Contig38                               264235 18 +  21539334 TGAGC-AT-T-T-TT--T-GAACA----A-
i Erythrocebus_patas.Contig38                            C 0 I 5
s Eschrichtius_robustus.EscRob_flattened_line_8968           72187 19 -    133382 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 25
s Eubalaena_japonica.EubJap_flattened_line_257977              773 19 -      1072 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 I 25
s Eulemur_albifrons.k141_51491                               15842 19 -     24895 TGGAC-AT-T-T-TT--T-GAATA---TA-
i Eulemur_albifrons.k141_51491                           C 0 I 5
s Eulemur_collaris.k141_601111                               43552 19 -     70999 TGAAC-AT-T-T-TT--T-GAATA---TA-
i Eulemur_collaris.k141_601111                           C 0 I 5
s Eulemur_coronatus.k141_384460                              87522 19 +    112731 TGAGC-AT-T-T-TT--T-GAATA---TA-
i Eulemur_coronatus.k141_384460                          C 0 I 5
s Eulemur_flavifrons.k141_433119                             44084 20 +     68309 TGAGA-ATTT-T-TT--T-GAATA---TA-
i Eulemur_flavifrons.k141_433119                         C 0 I 5
s Eulemur_fulvus.k141_636316                                 54409 19 -     65740 TGAAC-AT-T-T-TT--T-GAATA---TA-
i Eulemur_fulvus.k141_636316                             C 0 I 5
s Eulemur_macaco.k141_1562045                                25041 20 -     75513 TGAGA-ATTT-T-TT--T-GAATA---TA-
i Eulemur_macaco.k141_1562045                            C 0 I 5
s Eulemur_mongoz.k141_232305                                 49236 19 -     97555 TGAAC-AT-T-T-TT--T-GAATA---TA-
i Eulemur_mongoz.k141_232305                             C 0 I 5
s Eulemur_rubriventer.k141_1423786                            5960 19 +     30972 TGAGC-AT-T-T-TT--T-GAATA---TA-
i Eulemur_rubriventer.k141_1423786                       C 0 I 5
s Eulemur_rufus.k141_514691                                  43680 19 -     52037 TGAAC-AT-T-T-TT--T-GAATA---TA-
i Eulemur_rufus.k141_514691                              C 0 I 5
s Eulemur_sanfordi.k141_1122526                              60083 19 -    111500 TGAGC-AT-T-T-TT--T-GAATA---TA-
i Eulemur_sanfordi.k141_1122526                          C 0 I 5
s Felis_catus.CM001381.2                                 186247882 19 - 206538554 TGAGC-AT-T-T-TT--C-TAATA---GA-
i Felis_catus.CM001381.2                                 C 0 I 5
s Felis_catus_fca126.CM031415.1                          185117668 19 - 205367284 TGAGC-AT-T-T-TT--C-TAATA---GA-
i Felis_catus_fca126.CM031415.1                          C 0 I 5
s Felis_nigripes.FelNig_flattened_line_31944                 28765 19 -     30238 TGAGC-AT-T-T-TT--C-TAATA---GA-
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 5
s Fukomys_damarensis.KN121974.1                            2923032 19 -   3816255 TGAGC-AG-T-T-TT--T-CAATA---TA-
i Fukomys_damarensis.KN121974.1                          C 0 I 5
s Galago_moholi.ctg3793                                     126673 19 -    137831 TGAGT-AT-T-T-TT--T-GAATA---TA-
i Galago_moholi.ctg3793                                  C 0 I 5
s Galago_senegalensis.k141_991736                            10218 19 +     22493 TGAGT-AT-T-T-TT--T-GAATA---TA-
i Galago_senegalensis.k141_991736                        C 0 I 5
s Galagoides_demidoff.k141_561628                            22288 19 -     32986 TGAGC-AT-T-T-TT--T-GAACA---TA-
i Galagoides_demidoff.k141_561628                        C 0 I 5
s Galeopterus_variegatus.GalVar_scaffold_51812                2227 19 -     28519 TGAGC-AT-T-T-TT--C-AAACA---TA-
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 I 5
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92511 19 -     95226 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 25
s Glis_glis.GliGli_scaffold_163929                            2367 19 -      6791 TGAGC-AT-T-T-CT--T-AAATG---TA-
i Glis_glis.GliGli_scaffold_163929                       C 0 I 5
s Gorilla_beringei.k141_3358147                               6852 20 -      8343 TGAAC-AT-T-T-TT--T-GAACT---TAT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 72345 20 +  33314783 TGAAC-AT-T-T-TT--T-GAACT---TAT
i Gorilla_gorilla.LT578336.1                             I 108 I 156
s Graphiurus_murinus.GraMur_scaffold_10447                    3435 19 -     78134 TGAGC-AA-T-T-CT--C-AAATG---TA-
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 5
s Hapalemur_alaotrensis.k141_330369                          15767 19 -     40692 TGAGC-AT-G-T-TT--T-GAATA---TA-
i Hapalemur_alaotrensis.k141_330369                      C 0 I 5
s Hapalemur_gilberti.k141_646465                             37169 19 +     49394 TGAGC-AT-G-T-TT--T-GAATA---TA-
i Hapalemur_gilberti.k141_646465                         C 0 I 5
s Hapalemur_griseus.k141_763500                              62037 19 -     66874 TGAGC-AT-G-T-TT--T-GAATA---TA-
i Hapalemur_griseus.k141_763500                          C 0 I 5
s Hapalemur_meridionalis.k141_258450                         10911 19 -     42923 TGAGC-AT-G-T-TT--T-GAATA---TA-
i Hapalemur_meridionalis.k141_258450                     C 0 I 5
s Hapalemur_occidentalis.k141_578367                         17910 19 -     53142 TGAGC-AT-G-T-TT--T-GAATA---TA-
i Hapalemur_occidentalis.k141_578367                     C 0 I 5
s Helogale_parvula.HelPar_flattened_line_2585                31855 19 -    327341 TGAGC-AT-T-T-TT--C-TAATA---TA-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 5
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10186 19 +     48891 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 25
s Heterocephalus_glaber.JH602082.1                         1933452 19 -  22651954 TGAGC-AG-T-T-TT--T-CAATA---TA-
i Heterocephalus_glaber.JH602082.1                       C 0 I 4
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1299 19 +      8654 GGAGC-AT-T-T-CT--C-TAACA---CA-
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8691 19 -     36432 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 25
s Hipposideros_armiger.JXIK01000431.1                      1552672 19 -   1711038 TGAGC-AT-T-T-TC--C-TAATA---TG-
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 5
s Hipposideros_galeritus.HipGal_scaffold_164997               2111 19 -      2730 TGAGC-AT-T-T-TC--C-TAATA---TG-
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 5
s Hoolock_leuconedys.ctg274                                    143876  9 -    630532 TGAGC-AT-A-T------------------
i Hoolock_leuconedys.ctg274                                 C 0 I 4
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71249 19 +     83186 TGAGT-CT-T-T-TT--C-TAATA---TA-
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 17
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72884 19 +    143317 TGAGC-AG-T-T-TT--T-CAATA---TA-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 5
s Hylobates_agilis.k141_1155965                               6910 14 +     12352 TGAGC-AT-C-T-TT--T-GA---------
i Hylobates_agilis.k141_1155965                          C 0 I 10
s Hylobates_klossii.k141_738755                              14094 14 +     55766 TGAGC-AT-C-T-TT--T-GA---------
i Hylobates_klossii.k141_738755                          C 0 I 10
s Hylobates_pileatus_b.LG02                                       2053694 14 + 191637585 TGAGC-AT-C-T-TT--T-GA---------
i Hylobates_pileatus_b.LG02                                     C 0 I 10
s Hylobates_pileatus_a.tarseq_633                            7802572 14 +  11177569 TGAGC-AT-C-T-TT--T-GA---------
i Hylobates_pileatus_a.tarseq_633                          C 0 I 10
s Hystrix_cristata.HysCri_scaffold_5660                       8204 19 -    135385 TGAGC-AG-T-T-TT--T-GAACA---TA-
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 5
s Ictidomys_tridecemlineatus.JH393364.1                     387908 19 +   7955117 AGAGA-AT-T-T-TT--G-AAACA---TG-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 5
s Indri_indri.k141_2415743                                    3471 19 +     11955 TGAGC-AT-T-A-TT--T-GAATA---TA-
i Indri_indri.k141_2415743                               C 0 I 5
s Inia_geoffrensis.IniGeo_flattened_line_69447               11082 19 -     16823 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 25
s Jaculus_jaculus.JH725527.1                               1241141 15 +   9596543 TGAGT-AT-T-T-TT--C-AAA--------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72922 19 -     97402 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 25
s Lagothrix_lagothricha.k141_246028                          44313 19 +    110728 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Lagothrix_lagothricha.k141_246028                      C 0 I 5
s Lasiurus_borealis.LasBor_scaffold_16567                    64245 19 -     65777 TGAGT-GC-T-T-TT--C-TAACA---TA-
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 64
s Lemur_catta.scaffold_24                                 14760564 19 +  30322482 TGAGC-AT-G-T-TT--T-GAATA---TA-
i Lemur_catta.scaffold_24                                C 0 I 5
s Leontocebus_fuscicollis.k141_2994775                        5220 19 -     13097 GTGGA-AT-T-T-TT--T-GAACA---TA-
i Leontocebus_fuscicollis.k141_2994775                   C 0 I 5
s Leontocebus_illigeri.k141_2951200                           4974 19 +      5940 GGGGA-AT-T-T-TT--T-GAACA---TA-
i Leontocebus_illigeri.k141_2951200                      C 0 I 5
s Leontocebus_nigricollis.k141_3905062                        4797 19 -      5717 GGGGA-AT-T-T-TT--T-GAACA---TA-
i Leontocebus_nigricollis.k141_3905062                   C 0 I 5
s Leontopithecus_chrysomelas.k141_1327670                    11183 19 -     11567 GGGGC-CT-T-T-TT--T-GAACA---TA-
i Leontopithecus_chrysomelas.k141_1327670                C 0 I 5
s Leontopithecus_rosalia.k141_349454                         12564 19 -     12945 GGGGC-CT-T-T-TT--T-GAACA---TA-
i Leontopithecus_rosalia.k141_349454                     C 0 I 5
s Lepilemur_ankaranensis.k141_567626                         10076 19 +     29618 TGAGC-AT-T-T-TT--T-GAATA---TA-
i Lepilemur_ankaranensis.k141_567626                     C 0 I 5
s Lepilemur_dorsalis.k141_387009                             10072 19 +     31569 TGAGC-AT-T-T-TT--T-GAATA---TA-
i Lepilemur_dorsalis.k141_387009                         C 0 I 5
s Lepilemur_ruficaudatus.k141_330196                         10082 19 +     24756 TGAGC-AT-T-T-TT--T-GAATA---TA-
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 5
s Lepilemur_septentrionalis.k141_360456                      10082 19 +     16388 TGAGC-AT-T-T-TT--T-GAATA---TA-
i Lepilemur_septentrionalis.k141_360456                  C 0 I 5
s Leptonychotes_weddellii.KB714746.1                        814562 19 -   3914936 TGAGC-AT-T-T-TT--C-TAGTA---TA-
i Leptonychotes_weddellii.KB714746.1                     C 0 I 5
s Lepus_americanus.LepAme_scaffold_56121                     19229 11 +     24238 AAaga-ac-t-t-ag---------------
i Lepus_americanus.LepAme_scaffold_56121                 I 18 I 10
s Lipotes_vexillifer.KE559953.1                             342267 19 +    662738 TGAGC-AT-T-T-TT--C-TAGCA---TA-
i Lipotes_vexillifer.KE559953.1                          C 0 I 25
s Lophocebus_aterrimus.ctg367                               335229 19 -   1826925 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Lophocebus_aterrimus.ctg367                            C 0 I 5
s Loris_lydekkerianus.k141_2031736                           12371 19 +     19643 TGAGC-AT-T-T-TT--T-GAATA---TA-
i Loris_lydekkerianus.k141_2031736                       C 0 I 5
s Loris_tardigradus.ctg83                                  5046041 19 -   6120653 TGAGC-AT-T-T-TT--T-GAATA---TA-
i Loris_tardigradus.ctg83                                C 0 I 5
s Loxodonta_africana.GL010049.1                           39085968 19 +  43346337 TGAGT-AT-T-T-TT--C-CAACA---CA-
i Loxodonta_africana.GL010049.1                          C 0 I 5
s Lycaon_pictus.CM007581.1                                41615679 12 +  59628241 TGAA--AT-T-T-TT--C-T----------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46618 19 -     61512 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Macaca_arctoides.k141_1757516                          C 0 I 5
s Macaca_assamensis.Contig5                                 374280 19 -  60120075 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Macaca_assamensis.Contig5                              C 0 I 5
s Macaca_cyclopis.k119_263443                                26548 19 +     30207 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Macaca_cyclopis.k119_263443                            C 0 I 5
s Macaca_fascicularis.k141_1617581                            1386 19 -      5035 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Macaca_fascicularis.k141_1617581                       C 0 I 5
s Macaca_fuscata.k119_546792                                 26501 19 +     30527 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Macaca_fuscata.k119_546792                             C 0 I 5
s Macaca_leonina.k141_321385                                 37677 19 -     50087 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Macaca_leonina.k141_321385                             C 0 I 5
s Macaca_maura.k141_1103459                                  47421 19 +     51645 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Macaca_maura.k141_1103459                              C 0 I 5
s Macaca_mulatta.NC_041758.1                                416624 19 - 187317192 TGAGT-GT-T-T-TT--T-GAACA---TA-
i Macaca_mulatta.NC_041758.1                             C 0 I 5
s Macaca_nemestrina.KQ007038.1                              400854 19 +  25927173 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Macaca_nemestrina.KQ007038.1                           C 0 I 5
s Macaca_nigra.k141_2818840                                  50026 19 -     62418 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Macaca_nigra.k141_2818840                              C 0 I 5
s Macaca_radiata.k141_2139468                                 2557 19 +     14901 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Macaca_radiata.k141_2139468                            C 0 I 5
s Macaca_siberu.k141_2185972                                 46498 19 +     59329 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Macaca_siberu.k141_2185972                             C 0 I 5
s Macaca_silenus.Contig273                                  272406 19 +    668171 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Macaca_silenus.Contig273                               C 0 I 5
s Macaca_thibetana.k99_45532                                  1044 19 -      5049 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Macaca_thibetana.k99_45532                             C 0 I 5
s Macaca_tonkeana.k141_339739                                 4204 19 +     17132 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Macaca_tonkeana.k141_339739                            C 0 I 5
s Macroglossus_sobrinus.MacSob_scaffold_4024                224300 19 -    270270 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 5
s Mandrillus_leucophaeus.scaffold280                        323694 19 +  24302211 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Mandrillus_leucophaeus.scaffold280                     C 0 I 5
s Mandrillus_sphinx.Contig270                               358525 19 -    752769 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Mandrillus_sphinx.Contig270                            C 0 I 5
s Manis_javanica.JSZB01003497.1                             674611 19 -    737560 AGAGC-AT-T-T-TT--C-CAACA---TA-
i Manis_javanica.JSZB01003497.1                          C 0 I 5
s Manis_pentadactyla.KN006162.1                             221911 19 +    317179 AGAGC-AT-T-T-TT--C-CAACA---TA-
i Manis_pentadactyla.KN006162.1                          C 0 I 5
s Marmota_marmota.CZRN01000018.1                           7502122 19 +  40650429 Agaga-at-t-t-tt--g-aaata---tg-
i Marmota_marmota.CZRN01000018.1                         C 0 I 5
s Megaderma_lyra.MegLyr_scaffold_4542                       151454 19 +    207569 TGACC-AT-T-T-TC--T-TAAAA---TA-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_19308             27283 19 -     74585 TGAGT-AT-T-T-TT--C-TAATA---TA-
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 5
s Meriones_unguiculatus.MerUng_scaffold_7390                 51199 17 -    140813 TAAGT-AT-AAT--T--C-AA--A---CA-
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 5
s Mesocricetus_auratus.KB708134.1                         17430270 17 +  29670104 TGATT-TT-AAC--T--C-AA--A---CA-
i Mesocricetus_auratus.KB708134.1                        C 0 I 5
s Mesoplodon_bidens.MesBid_scaffold_6114                     88551 19 +     93471 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 25
s Mico_argentatus.k141_582562                                11345 19 +     17804 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Mico_argentatus.k141_582562                            C 0 I 5
s Mico_humeralifer.k141_1180625                              11845 19 -     12984 AGGGC-AT-T-T-TT--T-GAACA---TA-
i Mico_humeralifer.k141_1180625                          C 0 I 5
s Mico_schneideri.k141_1877700                                     20161 19 -     26561 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Mico_schneideri.k141_1877700                                 C 0 I 5
s Microcebus_murinus.CM007674.1                           74985914 19 +  93316391 TCAGC-AT-T-T-TT--T-GACTA---TA-
i Microcebus_murinus.CM007674.1                          C 0 I 5
s Microgale_talazaci.MicTal_scaffold_6613                    47756 19 +    145209 CGCGC-AT-T-A-CC--C-TAACA---TA-
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 5
s Micronycteris_hirsuta.MicHir_scaffold_2233                186139 19 +    200668 TGAGT-AT-T-T-TT--C-TAACA---TA-
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 5
s Microtus_ochrogaster.CM001695.1                         15963689 17 +  27267610 TTATT-CT-AAT--T--C-AA--A---CA-
i Microtus_ochrogaster.CM001695.1                        C 0 I 5
s Miniopterus_natalensis.LDJU01000034.1                    6364288 19 -   8254450 TCAGC-AT-T-T-TT--C-TAACA---TA-
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 5
s Miniopterus_schreibersii.MinSch_scaffold_23309             43195 19 -     48117 TCAGC-AT-T-T-TT--C-TAACA---TA-
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 5
s Miopithecus_ogouensis.k141_1534655                         23730 18 -     27822 TGAGC-GT-T-T-TT--T-GAACA----A-
i Miopithecus_ogouensis.k141_1534655                     C 0 I 5
s Mirounga_angustirostris.MirAng_flattened_line_54046         9573 19 +     27589 TGAGC-AT-T-T-TC--C-TAATA---TA-
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 5
s Mirza_zaza.k141_766280                                     53697 19 -     62432 TCAGC-AT-T-T-TT--T-GACTA---TA-
i Mirza_zaza.k141_766280                                 C 0 I 5
s Monodon_monoceros.MonMon_M_scaffold_103                   360656 19 +    437263 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 25
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180371 20 +    366855 TGAGC-AT-T-T-TT--TAAAACA---TA-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 5
s Moschus_moschiferus.MosMos_scaffold_13123                  26631 19 -     82753 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 25
s Mungos_mungo.MunMun_flattened_line_18455                   19588 19 -     63510 TGAGC-AT-T-T-TT--C-TAATA---TA-
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 5
s Murina_feae.MurFea_scaffold_17764                          40216 19 +     47283 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Murina_feae.MurFea_scaffold_17764                      C 0 I 5
s Mus_caroli.LT608237.1                                   35595305 17 + 120012414 TAAGA-CT-AAg--t--c-aa--a---aa-
i Mus_caroli.LT608237.1                                  C 0 I 5
s Mus_musculus.chr8                                       41688531 17 + 129401213 TAAGA-CT-AAg--t--c-aa--a---aa-
i Mus_musculus.chr8                                      C 0 I 5
s Mus_spretus.CM004101.1                                  39497825 17 + 130317789 TAAGA-CT-Aag--t--a-aa--a---aa-
i Mus_spretus.CM004101.1                                 C 0 I 5
s Muscardinus_avellanarius.MusAve_scaffold_12866             85271 22 -     86153 TGAAT-AT-T-T-CT--C-AAATACATTA-
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 5
s Mustela_putorius.JH418006.1                             14356189 19 +  14710649 caagt-at-t-t-tt--c-taata---ta-
i Mustela_putorius.JH418006.1                            C 0 I 5
s Myocastor_coypus.MyoCoy_scaffold_15261                     64179 19 +     67721 TGAGT-AG-T-T-TT--T-CAATA---TG-
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 5
s Myotis_brandtii.KE162005.1                               9794496 19 +  10118263 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Myotis_brandtii.KE162005.1                             C 0 I 5
s Myotis_davidii.KB100139.1                                4388670 19 +   6019432 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Myotis_davidii.KB100139.1                              C 0 I 5
s Myotis_lucifugus.GL429869.1                               384696 19 +   4330536 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Myotis_lucifugus.GL429869.1                            C 0 I 5
s Myotis_myotis.MyoMyo_scaffold_66571                         3490 19 +     18357 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 5
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120850 19 +    130748 TGAGC-AG-T-T-TT--C-TTACA---TG-
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 5
s Nannospalax_galili.KL204047.1                             947785 16 +   3037898 tgaat-at-t-t--t--c-aa--a---ga-
i Nannospalax_galili.KL204047.1                          C 0 I 5
s Nasalis_larvatus.k141_1350636                              30386 19 +     34575 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Nasalis_larvatus.k141_1350636                          C 0 I 5
s Neophocaena_asiaeorientalis.KZ687982.1                   1233322 19 -   7148211 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 25
s Noctilio_leporinus.NocLep_scaffold_7894                   128985 19 -    149072 TGAGC-AT-T-T-TT--C-TAGCA---TA-
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 5
s Nomascus_annamensis.k141_1771965                           54802 14 -    132029 TGAGC-AT-C-T-TT--T-GA---------
i Nomascus_annamensis.k141_1771965                       C 0 I 4
s Nomascus_concolor.k141_735679                              10897 14 -     16345 TGAGC-AT-C-T-TT--T-GA---------
i Nomascus_concolor.k141_735679                          C 0 I 4
s Nomascus_gabriellae.k141_57920                             16782 14 +     22201 TGAGC-AT-C-T-TT--T-GA---------
i Nomascus_gabriellae.k141_57920                         C 0 I 4
s Nomascus_siki_b.tarseq_93                            8415003 14 -  22158432 TGAGC-AT-C-T-TT--T-GA---------
i Nomascus_siki_b.tarseq_93                          C 0 I 4
s Nomascus_siki_a.k141_941534                                  27180 14 -     54323 TGAGC-AT-C-T-TT--T-GA---------
i Nomascus_siki_a.k141_941534                              C 0 I 4
s Nyctereutes_procyonoides.CAJHUB010000658.1                199275 12 +   9404916 TGAA--AT-T-T-TT--C-T----------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639268 19 + 196305487 TGAGC-AG-T-T-TT--T-GAATA---TA-
i Nycticebus_bengalensis.LG01                            C 0 I 5
s Nycticebus_coucang.k141_1296080                             1871 19 -      9413 TGAGC-AG-T-T-TT--T-GAATA---TA-
i Nycticebus_coucang.k141_1296080                        C 0 I 5
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566651 19 - 199412804 TGAGC-AT-T-T-TT--T-GAATA---TA-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 5
s Ochotona_princeps.JH802162.1                             2557959 15 -   3988456 A---C-AT-T-T--G--C-AGACA---TA-
i Ochotona_princeps.JH802162.1                           C 0 I 5
s Octodon_degus.JH651603.1                                11056270 19 -  11899542 TGAGT-AG-T-T-TT--T-CAATA---TA-
i Octodon_degus.JH651603.1                               C 0 I 5
s Odobenus_rosmarus.KB229312.1                             1452992 19 +   2017862 TGAGC-AT-T-T-TC--C-TAATG---TA-
i Odobenus_rosmarus.KB229312.1                           C 0 I 5
s Odocoileus_virginianus.KZ100018.1                         437400 19 -    630418 TGAGC-AT-T-C-TT--C-TAACA---CA-
i Odocoileus_virginianus.KZ100018.1                      C 0 I 25
s Okapia_johnstoni.LVCL01S0005463.1                          15595 19 +    150152 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 25
s Ondatra_zibethicus.OndZib_scaffold_7387                    93999 17 -    140218 TGATT-CT-AAT--T--C-AA--A---CA-
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 5
s Onychomys_torridus.OnyTor_scaffold_28377                    4432 17 -     41509 TGACT-CC-AGT--T--C-AA--A---CA-
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 1
s Orcinus_orca.KB316932.1                                  8103724 19 +  10937097 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Orcinus_orca.KB316932.1                                C 0 I 25
s Orycteropus_afer.OryAfe_flattened_line_201229                751 19 +     11607 TAAGT-AT-T-T-TT--T-TAACA---TA-
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 I 5
s Oryctolagus_cuniculus.CM000791.1                       107105909 11 - 174332312 ataga-ac-t-t-ag---------------
i Oryctolagus_cuniculus.CM000791.1                       I 1176 I 10
s Otocyon_megalotis.JAEUCK010005147.1                        40318 12 +    559221 TGAA--AT-T-T-TT--C-T----------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41820 19 -     51505 TGAGC-AT-T-T-TT--C-GAATA---TA-
i Otolemur_crassicaudatus.k141_649260                    C 0 I 5
s Otolemur_garnettii.GL873799.1                             354824 19 +   1103335 TGAGC-at-t-t-tt--t-gaata---ta-
i Otolemur_garnettii.GL873799.1                          C 0 I 5
s Ovis_aries.CM001607.2                                   26405306 19 -  44047080 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Ovis_aries.CM001607.2                                  C 0 I 25
s Ovis_canadensis.OviCan_scaffold_67953                       5825 19 +     17875 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 25
s Pan_troglodytes.KZ622849.1                                 34579 20 -    110857 TGAAC-AT-T-T-TT--T-GAACT---TAT
i Pan_troglodytes.KZ622849.1                             I 47 I 578
s Panthera_onca.PanOnc_flattened_line_3271                   25588 19 -    230217 TGAGC-AT-T-T-TT--C-TAACA---GA-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 5
s Panthera_pardus.KV860321.1                              18462914 19 -  18783137 TGAGC-AT-T-T-TT--C-TAATA---GA-
i Panthera_pardus.KV860321.1                             C 0 I 5
s Panthera_tigris.KE722367.1                               3973573 19 +   8748460 TGAGC-AT-T-T-TT--C-TAATA---GA-
i Panthera_tigris.KE722367.1                             C 0 I 5
s Pantholops_hodgsonii.KE114653.1                          1616834  8 +   2937107 TGAGC-AT-T--------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 I 33
s Papio_anubis.CM001495.2                                   244703 19 - 183742232 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Papio_anubis.CM001495.2                                C 0 I 5
s Papio_cynocephalus.k141_1507553                            10988 19 +     21308 TGAGC-GT-T-T-TT--T-GAAGA---TA-
i Papio_cynocephalus.k141_1507553                        C 0 I 5
s Papio_hamadryas.Contig39                                  293731 19 -  20919399 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Papio_hamadryas.Contig39                               C 0 I 5
s Papio_kindae.k141_2214839                                  23636 19 -     27687 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Papio_kindae.k141_2214839                              C 0 I 5
s Papio_papio.k141_3538738                                     307 19 +     10553 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Papio_papio.k141_3538738                               C 0 I 5
s Papio_ursinus.k141_5784434                                   267 19 -     10386 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Papio_ursinus.k141_5784434                             C 0 I 5
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16169 19 +     78924 TGAGC-AT-T-T-TT--C-TAATA---TG-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 5
s Perodicticus_ibeanus.k141_1921260                          28151 19 +     31479 TGAGC-AT-T-T-CT--T-GAATA---TA-
i Perodicticus_ibeanus.k141_1921260                      C 0 I 5
s Perodicticus_potto.k141_1854441                            20519 19 -     24908 TGAGC-AT-T-T-CT--T-GAATA---TA-
i Perodicticus_potto.k141_1854441                        C 0 I 5
s Perognathus_longimembris.PerPac_flattened_line_89005        2975 17 +      9367 TGAGA-AT-T-T-TC--T-AAATT------
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 5
s Peromyscus_maniculatus.KI615324.1                         247642 17 +  18517816 TGATT-CC-TAT--T--C-AA--A---CA-
i Peromyscus_maniculatus.KI615324.1                      C 0 I 1
s Petromus_typicus.PetTyp_scaffold_17301                     33013 19 -     56120 TGAGC-AG-T-T-TT--T-CAATA---TA-
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 5
s Phocoena_phocoena.PhoPho_flattened_line_24159               5250 19 -     63832 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 25
s Piliocolobus_badius.k141_2704958                            3817 19 +     55023 TGAGT-GT-T-T-TT--T-GAACA---TA-
i Piliocolobus_badius.k141_2704958                       C 0 I 5
s Piliocolobus_gordonorum.k141_381342                         3355 19 -     89929 TGAGC-AT-T-T-TT--T-GAACA---TA-
i Piliocolobus_gordonorum.k141_381342                    C 0 I 5
s Piliocolobus_kirkii.k141_1310104                            3945 19 +     40849 TGAGC-AT-T-T-TT--T-GAACA---TA-
i Piliocolobus_kirkii.k141_1310104                       C 0 I 5
s Piliocolobus_tephrosceles.PDMG02000141.1                  255620 19 +  14605196 TGAGT-GT-T-T-TT--T-GAACA---TA-
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 5
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5069 19 +     22231 TGAGC-AT-T-T-TC--C-TAACA---TT-
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 10
s Pithecia_albicans.k141_1239476                             65855 19 +    207309 GGAGC-AT-T-C-TT--T-GAACA---TA-
i Pithecia_albicans.k141_1239476                         C 0 I 5
s Pithecia_chrysocephala.k141_785207                          6947 19 -     25401 GGAGC-AT-T-C-TT--T-GAACA---TA-
i Pithecia_chrysocephala.k141_785207                     C 0 I 5
s Pithecia_hirsuta.k141_640380                               32691 19 +     58159 GGAGC-AT-T-C-TT--T-GAACA---TA-
i Pithecia_hirsuta.k141_640380                           C 0 I 5
s Pithecia_mittermeieri.k141_1280039                         32967 19 +     63561 GGAGC-AT-T-C-TT--T-GAACA---TA-
i Pithecia_mittermeieri.k141_1280039                     C 0 I 5
s Pithecia_pissinattii.k141_878371                           32727 19 +     51148 GGAGC-AT-T-C-TT--T-GAACA---TA-
i Pithecia_pissinattii.k141_878371                       C 0 I 5
s Pithecia_pithecia.tarseq_165                              557697 19 -   4542175 GGAGC-AT-T-C-TT--T-GAACA---TA-
i Pithecia_pithecia.tarseq_165                           C 0 I 5
s Pithecia_vanzolinii.k141_1369553                           32711 19 +     51125 GGAGC-AT-T-C-TT--T-GAACA---TA-
i Pithecia_vanzolinii.k141_1369553                       C 0 I 5
s Platanista_gangetica.PlaMin_flattened_line_83166            2267 19 +     19503 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 25
s Plecturocebus_bernhardi.k141_2549090                        9129 19 +     39866 AGACC-AT-T-T-TT--T-GAACA---TA-
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 5
s Plecturocebus_brunneus.k141_862875                          4211 19 -      9282 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Plecturocebus_brunneus.k141_862875                     C 0 I 5
s Plecturocebus_caligatus.k141_1382851                       43615 19 -     87950 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Plecturocebus_caligatus.k141_1382851                   C 0 I 5
s Plecturocebus_cinerascens.k141_1164729                     44009 19 -     88961 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 5
s Plecturocebus_cupreus.k141_2351393                          8707 19 -     39403 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Plecturocebus_cupreus.k141_2351393                     C 0 I 5
s Plecturocebus_dubius.k141_1058799                          43658 19 +     87928 GGAGC-AT-T-T-TT--T-GAACA---TA-
i Plecturocebus_dubius.k141_1058799                      C 0 I 5
s Plecturocebus_grovesi.k141_2013005                          8706 19 -     60166 AGAGC-AT-T-T-TT--T-GAACA---TA-
i Plecturocebus_grovesi.k141_2013005                     C 0 I 5
s Plecturocebus_hoffmannsi.k141_3303950                      15643 19 -     67232 AGACC-AT-T-T-TT--T-GAACA---TA-
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 5
s Plecturocebus_miltoni.k141_349282                          43559 19 -     90634 AGAGC-AT-T-T-TT--T-GAACA---TA-
i Plecturocebus_miltoni.k141_349282                      C 0 I 5
s Plecturocebus_moloch.k141_1031110                          45026 19 +     89403 AGAGC-AT-T-T-TT--T-GAACA---TA-
i Plecturocebus_moloch.k141_1031110                      C 0 I 5
s Pongo_abelii.CM009266.2                                   179006 19 - 189387572 TGAAC-AT-T-T-TT--T-GAACT---TA-
i Pongo_abelii.CM009266.2                                C 0 I 5
s Pongo_pygmaeus.ctg66                                      193823 19 -   9816681 TGAAC-AT-T-T-TT--T-GAACT---TA-
i Pongo_pygmaeus.ctg66                                   C 0 I 5
s Presbytis_comata.k141_1230337                              28965 19 +     69807 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Presbytis_comata.k141_1230337                          C 0 I 5
s Presbytis_mitrata.k141_584736                              46146 19 -     80239 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Presbytis_mitrata.k141_584736                          C 0 I 5
s Procavia_capensis.ProCapCap_scaffold_165387                 5290 19 +      7663 GGAGC-AT-T-T-CT--C-TAACA---CA-
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 5
s Prolemur_simus.MPIZ01000396.1                            1983712 19 +   4620579 TGAGC-AT-G-T-TT--T-GAATA---TA-
i Prolemur_simus.MPIZ01000396.1                          C 0 I 5
s Propithecus_coquerelli.NW_012148875.1                    1567222 19 -   2598838 TGAGc-at-t-a-tt--t-gaata---ta-
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 5
s Propithecus_coronatus.k141_209299                           4860 19 -      7103 TGAGC-AT-T-A-TT--T-GAATA---TA-
i Propithecus_coronatus.k141_209299                      C 0 I 5
s Propithecus_diadema.k141_153680                             5457 19 -     11706 TGAGC-AT-T-A-TT--T-GAATA---TA-
i Propithecus_diadema.k141_153680                        C 0 I 5
s Propithecus_edwardsi.k141_635656                            9194 19 -     30655 TGAGC-AT-T-A-TT--T-GAATA---TA-
i Propithecus_edwardsi.k141_635656                       C 0 I 5
s Propithecus_perrieri.k141_1496898                          35508 19 +     46564 TGAGC-AT-T-A-TT--T-GAATA---TA-
i Propithecus_perrieri.k141_1496898                      C 0 I 5
s Propithecus_tattersalli.k141_1127767                       95787 19 -     98465 TGAGC-AT-T-A-TT--T-GAATA---TA-
i Propithecus_tattersalli.k141_1127767                   C 0 I 5
s Propithecus_verreauxi.k141_1047036                          9426 19 +     35169 TGAGC-AT-T-A-TT--T-GAATA---TA-
i Propithecus_verreauxi.k141_1047036                     C 0 I 5
s Psammomys_obesus.NESX01036366.1                            38712 17 +     52041 TCAGT-AT-AAT--T--C-AA--A---CA-
i Psammomys_obesus.NESX01036366.1                        C 0 I 5
s Pteronotus_parnellii.KE847780.1                            53265 19 -     66298 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Pteronotus_parnellii.KE847780.1                        C 0 I 5
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5763 19 -     18639 TGAGT-AT-T-T-TT--C-TAATA---TA-
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 5
s Pteropus_alecto.KB030862.1                               5841872 19 -  28871421 tgagc-at-t-t-tt--a-taaca---ta-
i Pteropus_alecto.KB030862.1                             C 0 I 5
s Pteropus_vampyrus.KN525825.1                             3538387 19 -   4952924 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Pteropus_vampyrus.KN525825.1                           C 0 I 5
s Puma_concolor.QAVW01001104.1                            18100231 19 +  38429054 TGAGC-AT-T-T-TT--C-TAATA---GA-
i Puma_concolor.QAVW01001104.1                           C 0 I 5
s Pygathrix_cinerea.k141_1153803                             28332 19 +     91421 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Pygathrix_cinerea.k141_1153803                         C 0 I 5
s Pygathrix_nigripes_b.ctg100                                  154816 19 -   7812017 TGAGC-AT-T-T-TT--T-GAACA---TA-
i Pygathrix_nigripes_b.ctg100                               C 0 I 5
s Pygathrix_nigripes_a.k141_215492                              9189 19 +     72585 TGAGC-AT-T-T-TT--T-GAACA---TA-
i Pygathrix_nigripes_a.k141_215492                         C 0 I 5
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54314 19 +     55069 TGAGA-AT-T-C-TT--C-TAACA---TA-
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 25
s Rattus_norvegicus.chr16                                 37023998 17 -  90668790 TAAGA-CT-AAG--T--C-AA--A---CA-
i Rattus_norvegicus.chr16                                C 0 I 5
s Rhinolophus_sinicus.LVEH01000134.1                       2915837 19 +   3329780 TGAGC-AT-T-T-TC--C-TAACA---TG-
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 5
s Rhinopithecus_bieti.k119_778604                             2919 19 +      7119 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Rhinopithecus_bieti.k119_778604                        C 0 I 5
s Rhinopithecus_roxellana.NC_044550.1                    104123534 19 + 195417433 TGAGC-GT-T-T-TT--T-GAACA---CA-
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 5
s Rhinopithecus_strykeri.ctg102                             237761 19 -   7961872 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Rhinopithecus_strykeri.ctg102                          C 0 I 5
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76371 19 -    116970 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 5
s Saguinus_bicolor.k141_1429097                               5095 19 +     27962 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Saguinus_bicolor.k141_1429097                          C 0 I 5
s Saguinus_geoffroyi.k141_3779887                             4986 19 +      6077 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Saguinus_geoffroyi.k141_3779887                        C 0 I 5
s Saguinus_imperator.k141_1898058                             5079 19 +      5971 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Saguinus_imperator.k141_1898058                        C 0 I 5
s Saguinus_inustus.k141_2469308                               4997 19 +      5932 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Saguinus_inustus.k141_2469308                          C 0 I 5
s Saguinus_labiatus.k141_2380921                              3342 19 -      4390 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Saguinus_labiatus.k141_2380921                         C 0 I 5
s Saguinus_midas.LG03                                       392779 19 - 209938924 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Saguinus_midas.LG03                                    C 0 I 5
s Saguinus_mystax.k141_8077960                                4945 19 +      5979 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Saguinus_mystax.k141_8077960                           C 0 I 5
s Saguinus_oedipus.k141_1280589                               1515 19 -     22275 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Saguinus_oedipus.k141_1280589                          C 0 I 5
s Saiga_tatarica.SaiTat_scaffold_39512                        8993 19 +     16473 TGAGC-AT-T-C-TT--C-TAACA---TA-
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 25
s Saimiri_boliviensis.NW_024100920.1                       1110111 19 + 121099817 GGGGC-AT-T-T-TT--T-GAACA---CA-
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 5
s Saimiri_cassiquiarensis.k141_1467335                       31678 19 -     47369 GGGGC-AT-T-T-TT--T-GAACA---CA-
i Saimiri_cassiquiarensis.k141_1467335                   C 0 I 5
s Saimiri_macrodon.k141_1173117                              32064 19 -     79414 GGGGC-AT-T-T-TT--T-GAACA---CA-
i Saimiri_macrodon.k141_1173117                          C 0 I 5
s Saimiri_oerstedii.k141_245838                              28755 19 -     34454 GGGGC-AT-T-T-TT--T-GAACA---CA-
i Saimiri_oerstedii.k141_245838                          C 0 I 5
s Saimiri_sciureus.k141_1467173                              16156 19 -     22428 GGGGC-AT-T-T-TT--T-GAACA---CA-
i Saimiri_sciureus.k141_1467173                          C 0 I 5
s Saimiri_ustus.k141_360372                                  31310 19 -     47109 GGGGC-AT-T-T-TT--T-GAACA---CA-
i Saimiri_ustus.k141_360372                              C 0 I 5
s Sapajus_apella.ctg103                                     239359 19 +   5703754 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Sapajus_apella.ctg103                                  C 0 I 5
s Sapajus_macrocephalus.k141_796559                           8949 19 +     21866 GGGGC-AT-T-T-TT--T-GAACA---TA-
i Sapajus_macrocephalus.k141_796559                      C 0 I 5
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116943  5 +    313613 ---------------------CCA---TA-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 18 I 5
s Semnopithecus_entellus.k141_158471                         26661 19 +     27374 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Semnopithecus_entellus.k141_158471                     C 0 I 5
s Semnopithecus_hypoleucos.k141_1910531                      30173 19 +     58920 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Semnopithecus_hypoleucos.k141_1910531                  C 0 I 5
s Semnopithecus_johnii.k141_843753                           16671 19 -     45317 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Semnopithecus_johnii.k141_843753                       C 0 I 5
s Semnopithecus_priam.k141_714795                            24329 19 -     42441 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Semnopithecus_priam.k141_714795                        C 0 I 5
s Semnopithecus_schistaceus.k141_1432920                     27007 19 -     29113 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Semnopithecus_schistaceus.k141_1432920                 C 0 I 5
s Semnopithecus_vetulus.k141_244474                          30082 19 -     48123 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Semnopithecus_vetulus.k141_244474                      C 0 I 5
s Sigmodon_hispidus.SigHis_scaffold_20193                    50014 17 +     77746 TGATT-CT-AAT--T--C-AA--A---TA-
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126            1865275 19 -   1910179 TGAGC-AT-T-T-TT--G-TAACA---TA-
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 12
s Sorex_araneus.JH798187.1                                 4672355 21 +  18376816 TGAGC-AT-T-T-TTCAC-GGACA---TA-
i Sorex_araneus.JH798187.1                               C 0 I 12
s Spermophilus_dauricus.KZ294078.1                         1869486 19 +   3870691 AGAGA-AT-T-T-TT--G-AAACA---TG-
i Spermophilus_dauricus.KZ294078.1                       C 0 I 5
s Spilogale_gracilis.SpiGra_flattened_line_13525              7847 19 -     97271 TGAGC-AT-T-T-TT--C-TAATA---TG-
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 5
s Suricata_suricatta.SurSur_flattened_line_6629             126005 19 +    196729 TGAGC-AT-T-T-TT--C-TAATA---TA-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 5
s Sus_scrofa.CM000828.4                                    6645057  9 +  69701581 --------------T--T-AAACA---TA-
i Sus_scrofa.CM000828.4                                  C 0 I 13
s Symphalangus_syndactylus.tarseq_199                       392262 19 +   1523678 TGAGC-AT-C-T-TT--T-GAACT---TA-
i Symphalangus_syndactylus.tarseq_199                    C 0 I 5
s Tadarida_brasiliensis.TadBra_scaffold_54991                15419 19 +     22964 TGAGC-AT-T-T-TT--C-TCACA---CA-
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 5
s Tamandua_tetradactyla.TamTet_scaffold_224794                3841 19 +      5583 TGAGC-AG-T-T-TT--C-TTACA---TG-
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 5
s Tapirus_indicus.TapInd_scaffold_7432                      192730 19 +    199430 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 5
s Tapirus_terrestris.TapTer_scaffold_755                    106698 19 -    539355 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 5
s Tarsius_lariang.k141_1733899                                1775 19 +      9917 TGAGT-AT-T-T-TT--T-GAAAG---GG-
i Tarsius_lariang.k141_1733899                           C 0 I 5
s Tarsius_wallacei.k141_226975                                8573 19 +     20590 TGAGT-AT-T-T-TT--T-GAAAG---GG-
i Tarsius_wallacei.k141_226975                           C 0 I 5
s Theropithecus_gelada.CM009954.1                           354512 19 - 186847797 TGAGC-GT-T-T-TT--T-GAACA---TA-
i Theropithecus_gelada.CM009954.1                        C 0 I 5
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25168 20 -     33621 TGAGCCAG-T-T-TT--T-CAATA---TG-
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 5
s Tolypeutes_matacus.TolMat_scaffold_31955                   20809 19 -     31044 TGAGA-AG-T-T-TC--T-TATCA---TG-
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 5
s Tonatia_saurophila.TonSau_scaffold_294                    481264 19 -    610378 TGAGC-AT-T-T-TT--C-TAACA---TG-
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 5
s Trachypithecus_auratus.k141_1189070                        22206 19 +     26378 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Trachypithecus_auratus.k141_1189070                    C 0 I 5
s Trachypithecus_crepusculus.k141_539312                     34882 19 -     78344 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Trachypithecus_crepusculus.k141_539312                 C 0 I 5
s Trachypithecus_cristatus.k141_180416                       21531 19 +     25722 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Trachypithecus_cristatus.k141_180416                   C 0 I 5
s Trachypithecus_francoisi.k141_1453105                      29838 19 -     62838 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Trachypithecus_francoisi.k141_1453105                  C 0 I 5
s Trachypithecus_geei.k141_1001272                           29882 19 +     46913 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Trachypithecus_geei.k141_1001272                       C 0 I 5
s Trachypithecus_germaini.k141_57262                         10689 19 -     28527 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Trachypithecus_germaini.k141_57262                     C 0 I 5
s Trachypithecus_hatinhensis.k141_31479                      31773 19 -     64340 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 5
s Trachypithecus_laotum.k141_928651                          29811 19 -     63452 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Trachypithecus_laotum.k141_928651                      C 0 I 5
s Trachypithecus_leucocephalus.k141_96450                    11258 19 +     22490 TGGGT-GT-T-T-TT--T-GAACA---TA-
i Trachypithecus_leucocephalus.k141_96450                C 0 I 5
s Trachypithecus_melamera.k141_591572                         4681 19 -      6147 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Trachypithecus_melamera.k141_591572                    C 0 I 5
s Trachypithecus_obscurus.k141_848057                        11594 19 -     13050 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Trachypithecus_obscurus.k141_848057                    C 0 I 5
s Trachypithecus_phayrei.ctg124                             256824 19 -   6242583 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Trachypithecus_phayrei.ctg124                          C 0 I 5
s Trachypithecus_pileatus.k141_2622778                        2852 19 +     19340 TGGGC-GT-T-T-TT--T-GAACA---TA-
i Trachypithecus_pileatus.k141_2622778                   C 0 I 5
s Tragulus_javanicus.TraJav_scaffold_3462                   174601 19 -    200418 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 25
s Trichechus_manatus.JH594705.1                            6482663 19 -  10818551 TGAGC-AT-T-T-TT--C-TAACA---CG-
i Trichechus_manatus.JH594705.1                          C 0 I 5
s Tupaia_chinensis.KB320905.1                              1303591 19 +   3648735 TGAGC-AT-T-T-TT--T-GAATG---TA-
i Tupaia_chinensis.KB320905.1                            I 45 n 23
s Tupaia_tana.TupTan_flattened_line_394                       9512 19 -     70247 TGAGC-AT-T-T-TT--T-GAATG---TA-
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 5
s Tursiops_truncatus.MRVK01000835.1                       17366837 19 -  33153633 TGAGC-AT-T-T-TT--C-TAACA---TA-
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 37
s Uropsilus_gracilis.UroGra_scaffold_46687                    4695 19 -     21056 TTAAT-GT-A-T-TT--C-TCAGA---TA-
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 13
s Ursus_maritimus.KK499267.1                                183204 19 +   5085361 Tgagc-at-t-t-tt--c-aaata---ta-
i Ursus_maritimus.KK499267.1                             C 0 I 5
s Varecia_rubra.k141_787544                                  26368 19 -     30710 TGAGC-AT-T-T-TT--T-GAATA---TA-
i Varecia_rubra.k141_787544                              C 0 I 5
s Varecia_variegata.k141_289850                              25275 19 -    147434 TGAGC-AT-T-T-TT--T-GAATA---TA-
i Varecia_variegata.k141_289850                          C 0 I 5
s Vicugna_pacos.KN270157.1                                   77397 19 +   5488506 AGAGC-AT-T-C-GT--C-TAATA---TA-
i Vicugna_pacos.KN270157.1                               C 0 I 5
s Vulpes_lagopus.VulLag_flattened_line_12041                106041 12 -    112863 TGAA--AT-T-T-TT--C-T----------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175243 19 -    224448 GGAGC-AT-T-T-CT--G-AAACA---TG-
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 5
s Zalophus_californianus.ZalCal_flattened_line_17732         30200 19 -     86975 TGAGC-AT-T-T-TC--C-TAATG---TA-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 5
s Zapus_hudsonius.ZapHud_scaffold_286923                      1079  4 -      1899 TGAG--------------------------
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_504766            2121  5 +      2126 TGAGC-------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_504766       C 0 N 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6569 4 +     36723 ACTT
s Gorilla_beringei.k141_3358147                               6872 4 -      8343 ACTT
i Gorilla_beringei.k141_3358147                          C 0 I 6
s Gorilla_gorilla.LT578341.1                                255879 4 - 186649187 ACTT
i Gorilla_gorilla.LT578341.1                             I 14 I 6
s Pan_troglodytes.CM009242.2                               1473907 4 - 189151597 ACTT
i Pan_troglodytes.CM009242.2                             I 14 I 6
e Fukomys_damarensis.KN121974.1                            2923051 5 -   3816255 I
e Myocastor_coypus.MyoCoy_scaffold_15261                     64198 5 +     67721 I
e Sorex_araneus.JH798187.1                                 4672376 12 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667090 5 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              10892 9 +     12657 I
e Capromys_pilorides.CapPil_scaffold_762519                    614 5 -      1607 I
e Chinchilla_lanigera.JH722012.1                           1239833 5 -   2543920 I
e Nannospalax_galili.KL204047.1                             947801 5 +   3037898 I
e Saimiri_ustus.k141_360372                                  31329 5 -     47109 I
e Saimiri_sciureus.k141_1467173                              16175 5 -     22428 I
e Saimiri_oerstedii.k141_245838                              28774 5 -     34454 I
e Saimiri_macrodon.k141_1173117                              32083 5 -     79414 I
e Saimiri_cassiquiarensis.k141_1467335                       31697 5 -     47369 I
e Saimiri_boliviensis.NW_024100920.1                       1110130 5 + 121099817 I
e Dasyprocta_punctata.DasPun_flattened_line_15900            29197 5 +     75252 I
e Chrysochloris_asiatica.ChrAsi_scaffold_2215791               137 12 -       558 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              25188 5 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     33032 5 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005        2992 5 +      9367 I
e Octodon_degus.JH651603.1                                11056289 5 -  11899542 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72903 5 +    143317 I
e Heterocephalus_glaber.JH602082.1                         1933471 4 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   6582 5 -     10735 I
e Dipodomys_ordii.KN672350.1                              18951651 5 -  37912305 I
e Dinomys_branickii.DinBra_scaffold_10381                    99912 5 -    115145 I
e Cuniculus_paca.CunPac_flattened_line_7025                   5413 5 +     36344 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  19683 5 +     50838 I
e Cavia_tschudii.CavTsc_scaffold_23560                       64023 5 -     66877 I
e Cavia_porcellus.DS562891.1                               5000945 5 +  23407841 I
e Cavia_aperea.AVPZ01000300.1                              4997503 5 +  23392119 I
e Microgale_talazaci.MicTal_scaffold_6613                    47775 5 +    145209 I
e Echinops_telfairi.JH980293.1                            62856602 5 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229                770 5 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1226833 5 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866364 5 -  20541912 I
e Pygathrix_nigripes_a.k141_215492                              9208 5 +     72585 I
e Pygathrix_nigripes_b.ctg100                                  154835 5 -   7812017 I
e Pygathrix_cinerea.k141_1153803                             28351 5 +     91421 I
e Callibella_humilis.k141_1233062                            11263 5 +     18648 I
e Perodicticus_potto.k141_1854441                            20538 5 -     24908 I
e Perodicticus_ibeanus.k141_1921260                          28170 5 +     31479 I
e Otolemur_garnettii.GL873799.1                             354843 5 +   1103335 I
e Otolemur_crassicaudatus.k141_649260                        41839 5 -     51505 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566670 5 - 199412804 I
e Nycticebus_coucang.k141_1296080                             1890 5 -      9413 I
e Nycticebus_bengalensis.LG01                             93639287 5 + 196305487 I
e Loris_tardigradus.ctg83                                  5046060 5 -   6120653 I
e Loris_lydekkerianus.k141_2031736                           12390 5 +     19643 I
e Galagoides_demidoff.k141_561628                            22307 5 -     32986 I
e Galago_senegalensis.k141_991736                            10237 5 +     22493 I
e Galago_moholi.ctg3793                                     126692 5 -    137831 I
e Arctocebus_calabarensis.k141_1364444                       21320 5 -     45910 I
e Allochrocebus_solatus.k141_3554717                         19482 5 +     32033 I
e Allochrocebus_preussi.k141_1993939                         17797 5 -     21945 I
e Choloepus_hoffmanni.KN194906.1                            607470 5 -    839153 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   20828 5 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111096 5 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13745 5 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19240 10 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1373 5 +      9923 I
e Tupaia_tana.TupTan_flattened_line_394                       9531 5 -     70247 I
e Tupaia_chinensis.KB320905.1                              1303610 23 +   3648735 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30219 5 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106053 0 -    112863 C
e Ursus_maritimus.KK499267.1                                183223 5 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              7866 5 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          5782 5 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40330 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1453011 5 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199287 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356208 5 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9592 5 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27302 5 -     74585 I
e Lycaon_pictus.CM007581.1                                41615691 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        814581 5 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917187 5 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108117 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41616536 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          223401 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10058 0 -     23171 C
e CanFam4.chr16                                           42506422 0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6514 13 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            216788 5 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416449 5 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1083 0 -      1899 C
e Xerus_inauris.XerIna_scaffold_2302                        175262 5 -    224448 I
e Vicugna_pacos.KN270157.1                                   77416 5 +   5488506 I
e Varecia_variegata.k141_289850                              25294 5 -    147434 I
e Varecia_rubra.k141_787544                                  26387 5 -     30710 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4714 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17366856 37 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482682 5 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   174620 25 -    200418 I
e Trachypithecus_pileatus.k141_2622778                        2871 5 +     19340 I
e Trachypithecus_phayrei.ctg124                             256843 5 -   6242583 I
e Trachypithecus_obscurus.k141_848057                        11613 5 -     13050 I
e Trachypithecus_melamera.k141_591572                         4700 5 -      6147 I
e Trachypithecus_leucocephalus.k141_96450                    11277 5 +     22490 I
e Trachypithecus_laotum.k141_928651                          29830 5 -     63452 I
e Trachypithecus_hatinhensis.k141_31479                      31792 5 -     64340 I
e Trachypithecus_germaini.k141_57262                         10708 5 -     28527 I
e Trachypithecus_geei.k141_1001272                           29901 5 +     46913 I
e Trachypithecus_francoisi.k141_1453105                      29857 5 -     62838 I
e Trachypithecus_cristatus.k141_180416                       21550 5 +     25722 I
e Trachypithecus_crepusculus.k141_539312                     34901 5 -     78344 I
e Trachypithecus_auratus.k141_1189070                        22225 5 +     26378 I
e Tonatia_saurophila.TonSau_scaffold_294                    481283 5 -    610378 I
e Theropithecus_gelada.CM009954.1                           354531 5 - 186847797 I
e Tarsius_wallacei.k141_226975                                8592 5 +     20590 I
e Tarsius_lariang.k141_1733899                                1794 5 +      9917 I
e Tapirus_terrestris.TapTer_scaffold_755                    106717 5 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      192749 5 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                3860 5 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15438 5 +     22964 I
e Symphalangus_syndactylus.tarseq_199                       392281 5 +   1523678 I
e Sus_scrofa.CM000828.4                                    6645066 13 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126024 5 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1869505 5 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865294 12 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    50031 1 +     77746 I
e Semnopithecus_vetulus.k141_244474                          30101 5 -     48123 I
e Semnopithecus_schistaceus.k141_1432920                     27026 5 -     29113 I
e Semnopithecus_priam.k141_714795                            24348 5 -     42441 I
e Semnopithecus_johnii.k141_843753                           16690 5 -     45317 I
e Semnopithecus_hypoleucos.k141_1910531                      30192 5 +     58920 I
e Semnopithecus_entellus.k141_158471                         26680 5 +     27374 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116948 5 +    313613 I
e Sapajus_macrocephalus.k141_796559                           8968 5 +     21866 I
e Sapajus_apella.ctg103                                     239378 5 +   5703754 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9012 25 +     16473 I
e Saguinus_oedipus.k141_1280589                               1534 5 -     22275 I
e Saguinus_mystax.k141_8077960                                4964 5 +      5979 I
e Saguinus_midas.LG03                                       392798 5 - 209938924 I
e Saguinus_labiatus.k141_2380921                              3361 5 -      4390 I
e Saguinus_inustus.k141_2469308                               5016 5 +      5932 I
e Saguinus_imperator.k141_1898058                             5098 5 +      5971 I
e Saguinus_geoffroyi.k141_3779887                             5005 5 +      6077 I
e Saguinus_bicolor.k141_1429097                               5114 5 +     27962 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76390 5 -    116970 I
e Rhinopithecus_strykeri.ctg102                             237780 5 -   7961872 I
e Rhinopithecus_roxellana.NC_044550.1                    104123553 5 + 195417433 I
e Rhinopithecus_bieti.k119_778604                             2938 5 +      7119 I
e Rhinolophus_sinicus.LVEH01000134.1                       2915856 5 +   3329780 I
e Rattus_norvegicus.chr16                                 37024015 5 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29815                 54333 25 +     55069 I
e Puma_concolor.QAVW01001104.1                            18100250 5 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538406 5 -   4952924 I
e Pteropus_alecto.KB030862.1                               5841891 5 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53284 5 -     66298 I
e Psammomys_obesus.NESX01036366.1                            38729 5 +     52041 I
e Propithecus_verreauxi.k141_1047036                          9445 5 +     35169 I
e Propithecus_tattersalli.k141_1127767                       95806 5 -     98465 I
e Propithecus_perrieri.k141_1496898                          35527 5 +     46564 I
e Propithecus_edwardsi.k141_635656                            9213 5 -     30655 I
e Propithecus_diadema.k141_153680                             5476 5 -     11706 I
e Propithecus_coronatus.k141_209299                           4879 5 -      7103 I
e Propithecus_coquerelli.NW_012148875.1                    1567241 5 -   2598838 I
e Prolemur_simus.MPIZ01000396.1                            1983731 5 +   4620579 I
e Procavia_capensis.ProCapCap_scaffold_165387                 5309 5 +      7663 I
e Presbytis_mitrata.k141_584736                              46165 5 -     80239 I
e Presbytis_comata.k141_1230337                              28984 5 +     69807 I
e Pongo_pygmaeus.ctg66                                      193842 5 -   9816681 I
e Pongo_abelii.CM009266.2                                   179025 5 - 189387572 I
e Plecturocebus_moloch.k141_1031110                          45045 5 +     89403 I
e Plecturocebus_miltoni.k141_349282                          43578 5 -     90634 I
e Plecturocebus_hoffmannsi.k141_3303950                      15662 5 -     67232 I
e Plecturocebus_grovesi.k141_2013005                          8725 5 -     60166 I
e Plecturocebus_dubius.k141_1058799                          43677 5 +     87928 I
e Plecturocebus_cupreus.k141_2351393                          8726 5 -     39403 I
e Plecturocebus_cinerascens.k141_1164729                     44028 5 -     88961 I
e Plecturocebus_caligatus.k141_1382851                       43634 5 -     87950 I
e Plecturocebus_brunneus.k141_862875                          4230 5 -      9282 I
e Plecturocebus_bernhardi.k141_2549090                        9148 5 +     39866 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2286 25 +     19503 I
e Pithecia_vanzolinii.k141_1369553                           32730 5 +     51125 I
e Pithecia_pithecia.tarseq_165                              557716 5 -   4542175 I
e Pithecia_pissinattii.k141_878371                           32746 5 +     51148 I
e Pithecia_mittermeieri.k141_1280039                         32986 5 +     63561 I
e Pithecia_hirsuta.k141_640380                               32710 5 +     58159 I
e Pithecia_chrysocephala.k141_785207                          6966 5 -     25401 I
e Pithecia_albicans.k141_1239476                             65874 5 +    207309 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5088 10 +     22231 I
e Piliocolobus_tephrosceles.PDMG02000141.1                  255639 5 +  14605196 I
e Piliocolobus_kirkii.k141_1310104                            3964 5 +     40849 I
e Piliocolobus_gordonorum.k141_381342                         3374 5 -     89929 I
e Piliocolobus_badius.k141_2704958                            3836 5 +     55023 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5269 25 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         247659 1 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16188 5 +     78924 I
e Papio_ursinus.k141_5784434                                   286 5 -     10386 I
e Papio_papio.k141_3538738                                     326 5 +     10553 I
e Papio_kindae.k141_2214839                                  23655 5 -     27687 I
e Papio_hamadryas.Contig39                                  293750 5 -  20919399 I
e Papio_cynocephalus.k141_1507553                            11007 5 +     21308 I
e Papio_anubis.CM001495.2                                   244722 5 - 183742232 I
e Pantholops_hodgsonii.KE114653.1                          1616842 33 +   2937107 I
e Panthera_tigris.KE722367.1                               3973592 5 +   8748460 I
e Panthera_pardus.KV860321.1                              18462933 5 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25607 5 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       5844 25 +     17875 I
e Ovis_aries.CM001607.2                                   26405325 25 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105920 10 - 174332312 I
e Orcinus_orca.KB316932.1                                  8103743 25 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    4449 1 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    94016 5 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          15614 25 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         437419 25 -    630418 I
e Ochotona_princeps.JH802162.1                             2557974 5 -   3988456 I
e Nomascus_siki_a.k141_941534                                  27194 4 -     54323 I
e Nomascus_siki_b.tarseq_93                            8415017 4 -  22158432 I
e Nomascus_gabriellae.k141_57920                             16796 4 +     22201 I
e Nomascus_concolor.k141_735679                              10911 4 -     16345 I
e Nomascus_annamensis.k141_1771965                           54816 4 -    132029 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129004 5 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233341 25 -   7148211 I
e Nasalis_larvatus.k141_1350636                              30405 5 +     34575 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120869 5 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3509 5 +     18357 I
e Myotis_lucifugus.GL429869.1                               384715 5 +   4330536 I
e Myotis_davidii.KB100139.1                                4388689 5 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794515 5 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_12866             85293 5 -     86153 I
e Mus_spretus.CM004101.1                                  39497842 5 + 130317789 I
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I
e Mus_musculus.chr8                                       41688548 5 + 129401213 I
e Mus_caroli.LT608237.1                                   35595322 5 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          40235 5 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19607 5 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  26650 25 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180391 5 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360675 25 +    437263 I
e Mirza_zaza.k141_766280                                     53716 5 -     62432 I
e Miopithecus_ogouensis.k141_1534655                         23748 5 -     27822 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43214 5 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364307 5 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15963706 5 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                186158 5 +    200668 I
e Microcebus_murinus.CM007674.1                           74985933 5 +  93316391 I
e Mico_schneideri.k141_1877700                                     20180 5 -     26561 I
e Mico_humeralifer.k141_1180625                              11864 5 -     12984 I
e Mico_argentatus.k141_582562                                11364 5 +     17804 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88570 25 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17430287 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 51216 5 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       151473 5 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7502141 5 +  40650429 I
e Manis_pentadactyla.KN006162.1                             221930 5 +    317179 I
e Manis_javanica.JSZB01003497.1                             674630 5 -    737560 I
e Mandrillus_sphinx.Contig270                               358544 5 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        323713 5 +  24302211 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224319 5 -    270270 I
e Macaca_tonkeana.k141_339739                                 4223 5 +     17132 I
e Macaca_thibetana.k99_45532                                  1063 5 -      5049 I
e Macaca_silenus.Contig273                                  272425 5 +    668171 I
e Macaca_siberu.k141_2185972                                 46517 5 +     59329 I
e Macaca_radiata.k141_2139468                                 2576 5 +     14901 I
e Macaca_nigra.k141_2818840                                  50045 5 -     62418 I
e Macaca_nemestrina.KQ007038.1                              400873 5 +  25927173 I
e Macaca_mulatta.NC_041758.1                                416643 5 - 187317192 I
e Macaca_maura.k141_1103459                                  47440 5 +     51645 I
e Macaca_leonina.k141_321385                                 37696 5 -     50087 I
e Macaca_fuscata.k119_546792                                 26520 5 +     30527 I
e Macaca_fascicularis.k141_1617581                            1405 5 -      5035 I
e Macaca_cyclopis.k119_263443                                26567 5 +     30207 I
e Macaca_assamensis.Contig5                                 374299 5 -  60120075 I
e Macaca_arctoides.k141_1757516                              46637 5 -     61512 I
e Loxodonta_africana.GL010049.1                           39085987 5 +  43346337 I
e Lophocebus_aterrimus.ctg367                               335248 5 -   1826925 I
e Lipotes_vexillifer.KE559953.1                             342286 25 +    662738 I
e Lepilemur_septentrionalis.k141_360456                      10101 5 +     16388 I
e Lepilemur_ruficaudatus.k141_330196                         10101 5 +     24756 I
e Lepilemur_dorsalis.k141_387009                             10091 5 +     31569 I
e Lepilemur_ankaranensis.k141_567626                         10095 5 +     29618 I
e Leontopithecus_rosalia.k141_349454                         12583 5 -     12945 I
e Leontopithecus_chrysomelas.k141_1327670                    11202 5 -     11567 I
e Leontocebus_nigricollis.k141_3905062                        4816 5 -      5717 I
e Leontocebus_illigeri.k141_2951200                           4993 5 +      5940 I
e Leontocebus_fuscicollis.k141_2994775                        5239 5 -     13097 I
e Lemur_catta.scaffold_24                                 14760583 5 +  30322482 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64264 64 -     65777 I
e Lagothrix_lagothricha.k141_246028                          44332 5 +    110728 I
e Kogia_breviceps.KogBre_flattened_line_3970                 72941 25 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241156 0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11101 25 -     16823 I
e Indri_indri.k141_2415743                                    3490 5 +     11955 I
e Ictidomys_tridecemlineatus.JH393364.1                     387927 5 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       8223 5 -    135385 I
e Hylobates_pileatus_a.tarseq_633                            7802586 10 +  11177569 I
e Hylobates_pileatus_b.LG02                                       2053708 10 + 191637585 I
e Hylobates_klossii.k141_738755                              14108 10 +     55766 I
e Hylobates_agilis.k141_1155965                               6924 10 +     12352 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71268 17 +     83186 I
e Hoolock_leuconedys.ctg274                                    143885 4 -    630532 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2130 5 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1552691 5 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                8710 25 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1318 5 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10205 25 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                31874 5 -    327341 I
e Hapalemur_occidentalis.k141_578367                         17929 5 -     53142 I
e Hapalemur_meridionalis.k141_258450                         10930 5 -     42923 I
e Hapalemur_griseus.k141_763500                              62056 5 -     66874 I
e Hapalemur_gilberti.k141_646465                             37188 5 +     49394 I
e Hapalemur_alaotrensis.k141_330369                          15786 5 -     40692 I
e Graphiurus_murinus.GraMur_scaffold_10447                    3454 5 -     78134 I
e Glis_glis.GliGli_scaffold_163929                            2386 5 -      6791 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      92530 25 -     95226 I
e Galeopterus_variegatus.GalVar_scaffold_51812                2246 5 -     28519 I
e Felis_nigripes.FelNig_flattened_line_31944                 28784 5 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117687 5 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              60102 5 -    111500 I
e Eulemur_rufus.k141_514691                                  43699 5 -     52037 I
e Eulemur_rubriventer.k141_1423786                            5979 5 +     30972 I
e Eulemur_mongoz.k141_232305                                 49255 5 -     97555 I
e Eulemur_macaco.k141_1562045                                25061 5 -     75513 I
e Eulemur_fulvus.k141_636316                                 54428 5 -     65740 I
e Eulemur_flavifrons.k141_433119                             44104 5 +     68309 I
e Eulemur_coronatus.k141_384460                              87541 5 +    112731 I
e Eulemur_collaris.k141_601111                               43571 5 -     70999 I
e Eulemur_albifrons.k141_51491                               15861 5 -     24895 I
e Eubalaena_japonica.EubJap_flattened_line_257977              792 25 -      1072 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72206 25 -    133382 I
e Erythrocebus_patas.Contig38                               264253 5 +  21539334 I
e Equus_przewalskii.KK951119.1                              412408 5 -    498745 I
e Equus_caballus.CM000403.2                               21376426 5 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042488 5 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12579951 5 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           14202 5 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          32234 5 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       240823 25 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7351 18 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140347 5 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665561 5 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633000 25 -  35494412 I
e Daubentonia_madagascariensis.ctg71                        293642 5 +  12879189 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    646489 5 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5440 5 +     87169 I
e Cricetulus_griseus.LT883664.1                          213115903 5 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 45275 5 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          3853 5 -      8242 I
e Condylura_cristata.JH655891.1                           35808243 5 +  53390261 I
e Colobus_polykomos.k141_906115                               3886 5 -     84244 I
e Colobus_guereza.LG01                                      380329 5 - 200372422 I
e Colobus_angolensis.KN981557.1                             410448 5 -   2368649 I
e Chlorocebus_sabaeus.CM001947.1                            306042 5 - 135778131 I
e Chlorocebus_pygerythrus.k141_3063162                       11259 5 -     44032 I
e Chlorocebus_aethiops.ctg25                                344717 5 +  18827391 I
e Chiropotes_sagulatus.k141_1113111                           9057 5 +     34062 I
e Chiropotes_israelita.k141_313004                           43506 5 -    112038 I
e Chiropotes_albinasus.k141_1946120                           5116 5 +      5346 I
e Cheracebus_torquatus.k141_890198                           20440 5 +     39636 I
e Cheracebus_regulus.k141_471822                             20651 5 +    216457 I
e Cheracebus_lugens.k141_1179667                             20396 5 -     40346 I
e Cheracebus_lucifer.k141_2312002                             9983 5 -     32913 I
e Cheirogaleus_medius.k141_759766                             6234 5 -     15404 I
e Cheirogaleus_major.k141_666340                             31720 5 -     33796 I
e Cercopithecus_roloway.k141_3012935                         23816 5 +     36323 I
e Cercopithecus_pogonias.k141_6079                           26855 5 +     70610 I
e Cercopithecus_petaurista.k141_42573                         4459 5 +      8499 I
e Cercopithecus_nictitans.k141_2995370                       28297 5 -     32606 I
e Cercopithecus_neglectus.k141_858615                        33396 5 -     45857 I
e Cercopithecus_mona.ctg39                                  271028 5 +  21565898 I
e Cercopithecus_albogularis.ctg5                                  365301 5 -  39242232 I
e Cercopithecus_lowei.k141_2101310                           12714 5 -     25376 I
e Cercopithecus_hamlyni.k141_566925                          28934 5 -     34525 I
e Cercopithecus_diana.k141_132293                            13211 5 -     17524 I
e Cercopithecus_cephus.k141_4183004                           8093 5 +     20796 I
e Cercopithecus_ascanius.k141_3120866                        28129 5 -     40656 I
e Cercocebus_torquatus.k141_2159127                          45919 5 -    148725 I
e Cercocebus_lunulatus.k141_2500334                           1535 5 -     14410 I
e Cercocebus_chrysogaster.k141_1522556                       46102 5 +     47900 I
e Cercocebus_atys.KQ010504.1                                142363 5 -   4669795 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20110 5 +     27315 I
e Cephalopachus_bancanus.k141_1689090                         3531 5 -      5494 I
e Cebus_unicolor.k141_1654760                                68154 5 -     89041 I
e Cebus_olivaceus.k141_1404781                                9058 5 -     34880 I
e Cebus_albifrons.Contig27                                  374004 5 -  26074798 I
e Cebuella_pygmaea.k141_145798                               44236 5 +     53515 I
e Cebuella_niveiventris.k141_592277                           6178 5 -     12580 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80657 13 -    217609 I
e Castor_canadensis.CasCan_scaffold_39952                    28752 5 -     39886 I
e Carlito_syrichta.NW_007259797.1                           271570 5 +    496798 I
e Capra_hircus.CM004588.1                                 26592461 25 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410187 25 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210027 5 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666369 5 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632082 5 +  17673402 I
e Callithrix_kuhlii.k119_102356                               2781 5 +      8664 I
e Callithrix_jacchus.pat_scaffold_3                      165455258 5 + 189096842 I
e Callithrix_geoffroyi.k119_459277                            2866 5 -      8861 I
e Callimico_goeldii.k141_1609886                             10779 5 -     13885 I
e Cacajao_melanocephalus.k141_619699                         21608 5 +    119600 I
e Cacajao_hosomi.k141_81245                                  21695 5 +     95584 I
e Cacajao_calvus.k141_89051                                  44169 5 -     91139 I
e Cacajao_ayresi.k141_96119                                   8875 5 +     28062 I
e Bubalus_bubalis.KI419123.1                               1531118 25 -   4408762 I
e Bos_taurus.CM000203.6                                   27546103 23 -  45695690 I
e Bos_mutus.JH880303.1                                      755961 23 +   1948126 I
e Bos_indicus.CM003047.1                                  20357397 23 +  48749331 I
e Bison_bison.KN261452.1                                     23007 23 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     87465 25 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1092 25 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964592 25 -  23207421 I
e Avahi_peyrierasi.k141_1823318                               7355 5 -     19611 I
e Avahi_laniger.k141_2756659                                  7347 5 +     11645 I
e Ateles_paniscus.k141_866194                                24067 4 -     33135 I
e Ateles_marginatus.k141_970259                              50009 4 -     71267 I
e Ateles_geoffroyi_a.k141_1283730                              34638 5 +     44353 I
e Ateles_chamek.k141_615173                                   7084 4 -     28759 I
e Ateles_belzebuth.k141_1572163                              11949 4 +     48076 I
e Ateles_geoffroyi_b.tarseq_1536                               275781 5 +  21539123 I
e Aplodontia_rufa.AprRuf_scaffold_46868                      17259 5 -     32367 I
e Aotus_vociferans.k141_1514463                               2743 5 -     17186 I
e Aotus_trivirgatus.k141_318729                               3184 5 -     16391 I
e Aotus_nancymaae.KZ198451.1                                673190 5 +   5030052 I
e Aotus_griseimembra.k141_3192254                             2908 5 -     15923 I
e Aotus_azarae.k141_887050                                    2283 5 +     17741 I
e Antilocapra_americana.AntAmePen_scaffold_21030             51564 25 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178248 5 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1586458 25 +   2318259 I
e Alouatta_seniculus.k141_928287                             34025 5 +     42133 I
e Alouatta_puruensis.k141_251022                              9891 5 +     30854 I
e Alouatta_palliata.k141_638677                              47718 5 +     70886 I
e Alouatta_nigerrima.k141_376068                             42069 5 +     45454 I
e Alouatta_macconnelli.k141_1277969                            551 5 -      3959 I
e Alouatta_juara.k141_1687208                                43444 5 -     64179 I
e Alouatta_discolor.k141_2561099                             44994 5 +     55831 I
e Alouatta_caraya.k141_1109140                               45555 5 -     78289 I
e Alouatta_belzebul.k141_1011583                             73316 5 -     84148 I
e Allochrocebus_lhoesti.k141_3412094                          1246 5 +     13857 I
e Allenopithecus_nigroviridis.k141_3755588                   49215 5 +     53615 I
e Allactaga_bullata.AllBul_scaffold_20030                    19625 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     26313 5 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           813991 5 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6573 18 +     36723 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
s Acinonyx_jubatus.LLWD01001279.1                           813996 31 +   1699592 G-AGAGGT-CAGTG-GCCATTTC---------------AGT------------AGA-GT--T--G-G
i Acinonyx_jubatus.LLWD01001279.1                        I 5 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     26318 19 +     63021 A-AGATTT--------------T---------------GGT------------AGA-TT--T--G-g
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 5 I 933
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416454 31 +  29979442 g-agGTTT-CAGTA-ACCATTTC---------------AGT------------AGA-TT--T--G-A
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 5 I 15
s Ailurus_fulgens.LNAC01001112.1                            216793 31 +    347723 g-AGATTT-CAATA-ACCATTTC---------------AGT------------AGA-TT--T--G-A
i Ailurus_fulgens.LNAC01001112.1                         I 5 I 14
s Allactaga_bullata.AllBul_scaffold_20030                    19625 26 -     61208 ----------------------CATATTTGAA-ATTTCAGT------------AGC-TT--T--G-A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49220 18 +     53615 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Allenopithecus_nigroviridis.k141_3755588               I 5 C 0
s Allochrocebus_lhoesti.k141_3412094                          1251 18 +     13857 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Allochrocebus_lhoesti.k141_3412094                     I 5 C 0
s Allochrocebus_preussi.k141_1993939                         17802 18 -     21945 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Allochrocebus_preussi.k141_1993939                     I 5 C 0
s Allochrocebus_solatus.k141_3554717                         19487 18 +     32033 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Allochrocebus_solatus.k141_3554717                     I 5 C 0
s Alouatta_belzebul.k141_1011583                             73321 19 -     84148 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Alouatta_belzebul.k141_1011583                         I 5 C 0
s Alouatta_caraya.k141_1109140                               45560 19 -     78289 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Alouatta_caraya.k141_1109140                           I 5 C 0
s Alouatta_discolor.k141_2561099                             44999 19 +     55831 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Alouatta_discolor.k141_2561099                         I 5 C 0
s Alouatta_juara.k141_1687208                                43449 19 -     64179 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Alouatta_juara.k141_1687208                            I 5 C 0
s Alouatta_macconnelli.k141_1277969                            556 19 -      3959 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Alouatta_macconnelli.k141_1277969                      I 5 C 0
s Alouatta_nigerrima.k141_376068                             42074 19 +     45454 GGAATTA---------------C---------------AAT------------AGA-TT--T--G-A
i Alouatta_nigerrima.k141_376068                         I 5 C 0
s Alouatta_palliata.k141_638677                              47723 19 +     70886 GGAGTTA---------------C---------------AAT------------AGA-TT--T--C-A
i Alouatta_palliata.k141_638677                          I 5 C 0
s Alouatta_puruensis.k141_251022                              9896 19 +     30854 AGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Alouatta_puruensis.k141_251022                         I 5 C 0
s Alouatta_seniculus.k141_928287                             34030 19 +     42133 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Alouatta_seniculus.k141_928287                         I 5 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586483 11 +   2318259 --------------------------------------AGT------------AGA-TT--T--G-A
i Ammotragus_lervia.NIVO01071767.1                       I 25 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178253 31 -    412891 G-AGATTT-CCATA-ACCATTTC---------------ATT------------AGA-AT--G--G-A
i Anoura_caudifer.AnoCau_scaffold_1412                   I 5 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51589 11 -     68529 --------------------------------------AGT------------AGA-TT--T--G-A
i Antilocapra_americana.AntAmePen_scaffold_21030         I 25 C 0
s Aotus_azarae.k141_887050                                    2288 19 +     17741 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Aotus_azarae.k141_887050                               I 5 C 0
s Aotus_griseimembra.k141_3192254                             2913 19 -     15923 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Aotus_griseimembra.k141_3192254                        I 5 C 0
s Aotus_nancymaae.KZ198451.1                                673195 19 +   5030052 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Aotus_nancymaae.KZ198451.1                             I 5 C 0
s Aotus_trivirgatus.k141_318729                               3189 19 -     16391 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Aotus_trivirgatus.k141_318729                          I 5 C 0
s Aotus_vociferans.k141_1514463                               2748 19 -     17186 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Aotus_vociferans.k141_1514463                          I 5 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17264 19 -     32367 G-AGGATT--------------T---------------AGT------------AGA-CT--T--G-A
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 5 C 0
s Arctocebus_calabarensis.k141_1364444                       21325 16 -     45910 A-AGATTT--------------C---------------AAT------------AGA-TT--------
i Arctocebus_calabarensis.k141_1364444                   I 5 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6527 12 -     15198 ----------------------C---------------ACC------------AGA-AC--T--G-A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 13 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275786 19 +  21539123 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Ateles_geoffroyi_b.tarseq_1536                            I 5 C 0
s Ateles_belzebuth.k141_1572163                              11953 19 +     48076 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Ateles_belzebuth.k141_1572163                          I 4 C 0
s Ateles_chamek.k141_615173                                   7088 19 -     28759 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Ateles_chamek.k141_615173                              I 4 C 0
s Ateles_geoffroyi_a.k141_1283730                              34643 19 +     44353 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Ateles_geoffroyi_a.k141_1283730                          I 5 C 0
s Ateles_marginatus.k141_970259                              50013 19 -     71267 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Ateles_marginatus.k141_970259                          I 4 C 0
s Ateles_paniscus.k141_866194                                24071 19 -     33135 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Ateles_paniscus.k141_866194                            I 4 C 0
s Avahi_laniger.k141_2756659                                  7352 19 +     11645 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Avahi_laniger.k141_2756659                             I 5 C 0
s Avahi_peyrierasi.k141_1823318                               7360 19 -     19611 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Avahi_peyrierasi.k141_1823318                          I 5 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964617 11 -  23207421 --------------------------------------AGT------------AGA-TT--T--G-A
i Balaenoptera_acutorostrata.KI537508.1                  I 25 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1117 11 -     25979 --------------------------------------AGT------------AGA-TT--T--G-A
i Balaenoptera_bonaerensis.DF411050.1                    I 25 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87490 11 +    124022 --------------------------------------AGT------------AGA-TT--T--G-A
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 25 C 0
s Bison_bison.KN261452.1                                     23030 11 +    288883 --------------------------------------AGT------------AGA-TT--T--G-A
i Bison_bison.KN261452.1                                 I 23 C 0
s Bos_indicus.CM003047.1                                  20357420 11 +  48749331 --------------------------------------AGT------------AGA-TT--T--G-A
i Bos_indicus.CM003047.1                                 I 23 C 0
s Bos_mutus.JH880303.1                                      755984 11 +   1948126 --------------------------------------AGT------------AGA-TT--T--G-A
i Bos_mutus.JH880303.1                                   I 23 C 0
s Bos_taurus.CM000203.6                                   27546126 11 -  45695690 --------------------------------------AGT------------AGA-TT--T--G-A
i Bos_taurus.CM000203.6                                  I 23 C 0
s Bubalus_bubalis.KI419123.1                               1531143 11 -   4408762 --------------------------------------AGT------------AGA-TT--T--G-A
i Bubalus_bubalis.KI419123.1                             I 25 C 0
s Cacajao_ayresi.k141_96119                                   8880 19 +     28062 GGAGAGA---------------C---------------ACT------------AGA-TT--T--G-A
i Cacajao_ayresi.k141_96119                              I 5 C 0
s Cacajao_calvus.k141_89051                                  44174 19 -     91139 GGAGAGA---------------C---------------ACT------------AGA-TT--T--G-A
i Cacajao_calvus.k141_89051                              I 5 C 0
s Cacajao_hosomi.k141_81245                                  21700 19 +     95584 GGAGAGA---------------C---------------ACT------------AGA-TT--T--G-A
i Cacajao_hosomi.k141_81245                              I 5 C 0
s Cacajao_melanocephalus.k141_619699                         21613 19 +    119600 GGAGAGA---------------C---------------ACT------------AGA-TT--T--G-A
i Cacajao_melanocephalus.k141_619699                     I 5 C 0
s Callibella_humilis.k141_1233062                            11268 19 +     18648 GGAGATA---------------C---------------GAT------------AGA-CT--T--G-A
i Callibella_humilis.k141_1233062                        I 5 C 0
s Callimico_goeldii.k141_1609886                             10784 19 -     13885 GGAGATA---------------C---------------CAT------------AGA-TT--T--G-A
i Callimico_goeldii.k141_1609886                         I 5 C 0
s Callithrix_geoffroyi.k119_459277                            2871 19 -      8861 GGAGATA---------------C---------------GAT------------AGA-CT--T--G-A
i Callithrix_geoffroyi.k119_459277                       I 5 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455263 19 + 189096842 GGAGATA---------------C---------------GAT------------AGA-CT--T--G-A
i Callithrix_jacchus.pat_scaffold_3                      I 5 C 0
s Callithrix_kuhlii.k119_102356                               2786 19 +      8664 GGAGATA---------------C---------------GAT------------AGA-CT--T--G-A
i Callithrix_kuhlii.k119_102356                          I 5 C 0
s Camelus_bactrianus.KN276810.1                            7632087 31 +  17673402 G-AGATTT-CAGTA-ACTATTTC---------------AGT------------AGA-TT--T--G-A
i Camelus_bactrianus.KN276810.1                          I 5 C 0
s Camelus_dromedarius.KN272107.1                           4666374 31 +   7040546 G-AGATTT-CAGTA-ACTATTTC---------------AGT------------AGA-TT--T--G-A
i Camelus_dromedarius.KN272107.1                         I 5 C 0
s Camelus_ferus.KB017975.1                                 1210032 31 +   1652518 G-AGATTT-CAGTA-ACTATTTC---------------AGT------------AGA-TT--T--G-A
i Camelus_ferus.KB017975.1                               I 5 C 0
s Capra_aegagrus.CM003241.1                               27410212 11 -  46296322 --------------------------------------AGT------------AGA-TT--T--G-A
i Capra_aegagrus.CM003241.1                              I 25 C 0
s Capra_hircus.CM004588.1                                 26592486 11 +  44709034 --------------------------------------AGT------------AGA-TT--T--G-A
i Capra_hircus.CM004588.1                                I 25 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    619 19 -      1607 G-AGATCT--------------T---------------GCT------------TGA-GT--T--G-A
i Capromys_pilorides.CapPil_scaffold_762519              I 5 C 0
s Carlito_syrichta.NW_007259797.1                           271575 19 +    496798 G-AGATCT--------------C---------------AAT------------AGA-TT--T--G-A
i Carlito_syrichta.NW_007259797.1                        I 5 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1378 31 +      9923 G-AGATTT-CCATA-ACCATCTC---------------ACC------------AGA-AT--G--G-A
i Carollia_perspicillata.CarPer_scaffold_107871          I 5 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28757 19 -     39886 G-AGATTT--------------T---------------AGT------------AGA-CT--T--G-A
i Castor_canadensis.CasCan_scaffold_39952                I 5 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80670 23 -    217609 --------------------------------------AGGAACATTTCAGTAAGA-TT--T--G-A
i Catagonus_wagneri.CatWag_scaffold_2839                 I 13 C 0
s Cavia_aperea.AVPZ01000300.1                              4997508 19 +  23392119 G-AGATTT--------------C---------------ACT------------AGA-GT--T--G-A
i Cavia_aperea.AVPZ01000300.1                            I 5 C 0
s Cavia_porcellus.DS562891.1                               5000950 19 +  23407841 G-AGATTT--------------C---------------ACT------------AGA-GT--T--G-A
i Cavia_porcellus.DS562891.1                             I 5 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64028 19 -     66877 G-AGATTT--------------C---------------ACT------------AGA-GT--T--G-A
i Cavia_tschudii.CavTsc_scaffold_23560                   I 5 C 0
s Cebuella_niveiventris.k141_592277                           6183 19 -     12580 AGAGATA---------------C---------------GAT------------AGA-CT--T--G-A
i Cebuella_niveiventris.k141_592277                      I 5 C 0
s Cebuella_pygmaea.k141_145798                               44241 19 +     53515 AGAGATA---------------C---------------GAT------------AGA-CT--T--G-A
i Cebuella_pygmaea.k141_145798                           I 5 C 0
s Cebus_albifrons.Contig27                                  374009 19 -  26074798 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Cebus_albifrons.Contig27                               I 5 C 0
s Cebus_olivaceus.k141_1404781                                9063 19 -     34880 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Cebus_olivaceus.k141_1404781                           I 5 C 0
s Cebus_unicolor.k141_1654760                                68159 19 -     89041 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Cebus_unicolor.k141_1654760                            I 5 C 0
s Cephalopachus_bancanus.k141_1689090                         3536 19 -      5494 G-AGATCT--------------C---------------AAT------------AGA-TT--T--G-A
i Cephalopachus_bancanus.k141_1689090                    I 5 C 0
s Ceratotherium_simum.JH767749.1                          15493282 31 -  27778364 G-AGATTT--------------CA-GT--AAACATTTCAGT------------AGA-TT--T--G-A
i Ceratotherium_simum.JH767749.1                         I 5 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20115 31 +     27315 G-AGATTT--------------CA-GT--AAACATTTCAGT------------AGA-TT--T--G-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 5 C 0
s Cercocebus_atys.KQ010504.1                                142368 18 -   4669795 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Cercocebus_atys.KQ010504.1                             I 5 C 0
s Cercocebus_chrysogaster.k141_1522556                       46107 18 +     47900 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Cercocebus_chrysogaster.k141_1522556                   I 5 C 0
s Cercocebus_lunulatus.k141_2500334                           1540 18 -     14410 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Cercocebus_lunulatus.k141_2500334                      I 5 C 0
s Cercocebus_torquatus.k141_2159127                          45924 18 -    148725 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Cercocebus_torquatus.k141_2159127                      I 5 C 0
s Cercopithecus_ascanius.k141_3120866                        28134 18 -     40656 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Cercopithecus_ascanius.k141_3120866                    I 5 C 0
s Cercopithecus_cephus.k141_4183004                           8098 18 +     20796 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Cercopithecus_cephus.k141_4183004                      I 5 C 0
s Cercopithecus_diana.k141_132293                            13216 18 -     17524 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Cercopithecus_diana.k141_132293                        I 5 C 0
s Cercopithecus_hamlyni.k141_566925                          28939 18 -     34525 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Cercopithecus_hamlyni.k141_566925                      I 5 C 0
s Cercopithecus_lowei.k141_2101310                           12719 18 -     25376 C-AGATA---------------C---------------AGT------------ATA-TT--T--G-A
i Cercopithecus_lowei.k141_2101310                       I 5 C 0
s Cercopithecus_albogularis.ctg5                                  365306 18 -  39242232 C-AGACA---------------C---------------AGT------------AGA-TT--T--G-A
i Cercopithecus_albogularis.ctg5                               I 5 C 0
s Cercopithecus_mona.ctg39                                  271033 18 +  21565898 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Cercopithecus_mona.ctg39                               I 5 C 0
s Cercopithecus_neglectus.k141_858615                        33401 18 -     45857 C-AGATA---------------C---------------AGT------------ATA-TT--T--G-A
i Cercopithecus_neglectus.k141_858615                    I 5 C 0
s Cercopithecus_nictitans.k141_2995370                       28302 18 -     32606 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Cercopithecus_nictitans.k141_2995370                   I 5 C 0
s Cercopithecus_petaurista.k141_42573                         4464 18 +      8499 C-AGATA---------------C---------------AGT------------ATA-TT--T--G-A
i Cercopithecus_petaurista.k141_42573                    I 5 C 0
s Cercopithecus_pogonias.k141_6079                           26860 18 +     70610 C-AGATA---------------C---------------AGT------------ATA-TT--T--G-A
i Cercopithecus_pogonias.k141_6079                       I 5 C 0
s Cercopithecus_roloway.k141_3012935                         23821 18 +     36323 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Cercopithecus_roloway.k141_3012935                     I 5 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13750 19 -     19938 G-AGATTT--------------C---------------ACA------------AGA-TT--T--G-C
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 5 C 0
s Cheirogaleus_major.k141_666340                             31725 19 -     33796 G-AAATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Cheirogaleus_major.k141_666340                         I 5 C 0
s Cheirogaleus_medius.k141_759766                             6239 19 -     15404 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Cheirogaleus_medius.k141_759766                        I 5 C 0
s Cheracebus_lucifer.k141_2312002                             9988 19 -     32913 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Cheracebus_lucifer.k141_2312002                        I 5 C 0
s Cheracebus_lugens.k141_1179667                             20401 19 -     40346 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Cheracebus_lugens.k141_1179667                         I 5 C 0
s Cheracebus_regulus.k141_471822                             20656 19 +    216457 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Cheracebus_regulus.k141_471822                         I 5 C 0
s Cheracebus_torquatus.k141_890198                           20445 19 +     39636 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Cheracebus_torquatus.k141_890198                       I 5 C 0
s Chinchilla_lanigera.JH722012.1                           1239838 19 -   2543920 G-AGATCT--------------T---------------GCT------------AAA-GC--A--G-A
i Chinchilla_lanigera.JH722012.1                         I 5 C 0
s Chiropotes_albinasus.k141_1946120                           5121 19 +      5346 GGAGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Chiropotes_albinasus.k141_1946120                      I 5 N 0
s Chiropotes_israelita.k141_313004                           43511 19 -    112038 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Chiropotes_israelita.k141_313004                       I 5 C 0
s Chiropotes_sagulatus.k141_1113111                           9062 19 +     34062 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Chiropotes_sagulatus.k141_1113111                      I 5 C 0
s Chlorocebus_aethiops.ctg25                                344722 18 +  18827391 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Chlorocebus_aethiops.ctg25                             I 5 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11264 18 -     44032 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Chlorocebus_pygerythrus.k141_3063162                   I 5 C 0
s Chlorocebus_sabaeus.CM001947.1                            306047 18 - 135778131 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Chlorocebus_sabaeus.CM001947.1                         I 5 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                    0 18 +     10270 --AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Choloepus_didactylus.ChoDid_scaffold_147047            N 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607475 19 -    839153 G-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Choloepus_hoffmanni.KN194906.1                         I 5 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2215791               149 19 -       558 G-AGATTT--------------C---------------AGT------------AGA-TT--T--A-A
i Chrysochloris_asiatica.ChrAsi_scaffold_2215791         I 12 C 0
s Colobus_angolensis.KN981557.1                             410453 18 -   2368649 A-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Colobus_angolensis.KN981557.1                          I 5 C 0
s Colobus_guereza.LG01                                      380334 18 - 200372422 A-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Colobus_guereza.LG01                                   I 5 C 0
s Colobus_polykomos.k141_906115                               3891 18 -     84244 A-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Colobus_polykomos.k141_906115                          I 5 C 0
s Condylura_cristata.JH655891.1                           35808248  2 +  53390261 g-a----------------------------------------------------------------
i Condylura_cristata.JH655891.1                          I 5 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3858 30 -      8242 G-AGT-TT-TTGTA-ACTATTTC---------------AGT------------AGA-TT--T--G-A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 5 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 45280 19 -     83289 A-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Cricetomys_gambianus.CriGam_scaffold_14425             I 5 I 670
s Cricetulus_griseus.LT883664.1                          213115908 19 - 224834208 A-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Cricetulus_griseus.LT883664.1                          I 5 I 1722
s Crocidura_indochinensis.CroInd_scaffold_77846              10901 10 +     12657 -----------------------------------------------------AGATTT--T--TAA
i Crocidura_indochinensis.CroInd_scaffold_77846          I 9 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5445 31 +     87169 G-ACATTT-CAGTA-ACCATTTC---------------AGTA------------GA-TT--T--G-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 5 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646494 19 -   1526836 G-AGATAT--------------C---------------GCT------------AGG-GT--T--G-A
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 5 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19688 19 +     50838 G-AGATCT--------------C---------------ACT------------AGA-GT--T--G-A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 5 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5418 19 +     36344 G-AGATCT--------------C---------------ACT------------AGA-GT--T--G-A
i Cuniculus_paca.CunPac_flattened_line_7025              I 5 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29202 19 +     75252 G-AGATCT--------------C---------------ACT------------TGA-GT--T--G-A
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 5 C 0
s Dasypus_novemcinctus.JH564415.1                          2111101 19 -   2246927 G-AGAGTT--------------C---------------ACA------------AGA-TT--T--G-C
i Dasypus_novemcinctus.JH564415.1                        I 5 C 0
s Daubentonia_madagascariensis.ctg71                        293647 19 +  12879189 G-AGATTT--------------C---------------AAT------------AGA-TT--T--G-A
i Daubentonia_madagascariensis.ctg71                     I 5 C 0
s Delphinapterus_leucas.KZ290073.1                        18633025 11 -  35494412 --------------------------------------AGT------------AGA-TT--T--G-A
i Delphinapterus_leucas.KZ290073.1                       I 25 C 0
s Desmodus_rotundus.KZ672289.1                            11866369 31 -  20541912 G-AGATTT-CCATA-ACCATTTC---------------CCT------------AGA-AT--T--G-A
i Desmodus_rotundus.KZ672289.1                           I 5 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665566 19 -   1390856 G-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 5 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140352 31 -    198055 G-AGATTT--------------CA-GT--AAACAGTTCAGT------------AGA-TT--T--G-A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 5 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99917 19 -    115145 G-AGATCT--------------C---------------ACT------------AGA-AC--G--G-A
i Dinomys_branickii.DinBra_scaffold_10381                I 5 C 0
s Dipodomys_ordii.KN672350.1                              18951656 19 -  37912305 G-AGATTT--------------C---------------TAT------------AGA-TC--T--G-A
i Dipodomys_ordii.KN672350.1                             I 5 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6587 19 -     10735 G-AGATTT--------------C---------------TAT------------AGA-TC--T--G-A
i Dipodomys_stephensi.DipSte_scaffold_89095              I 5 C 0
s Echinops_telfairi.JH980293.1                            62856607 19 - 111700974 G-AGATT----G----------G---------------AGT------------Ggg-tt--t--a-a
i Echinops_telfairi.JH980293.1                           I 5 C 0
s Eidolon_helvum.AWHC01266696.1                               7369 10 +     19438 ---------------------------------------CT------------AGA-TT--T--G-A
i Eidolon_helvum.AWHC01266696.1                          I 18 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240848 11 -    607251 --------------------------------------GGT------------AGA-TT--T--G-A
i Elaphurus_davidianus.JRFZ01104969.1                    I 25 C 0
s Elephantulus_edwardii.JH947257.1                         1226838 19 +  10337057 G-AGGTT----G----------C---------------ACT------------AGG-TT--T--T-G
i Elephantulus_edwardii.JH947257.1                       I 5 I 7
s Ellobius_lutescens.LOEQ01008920.1                          32239 19 +    110024 A-AGATAT--------------C---------------TAT------------AGA-GT--A--G-A
i Ellobius_lutescens.LOEQ01008920.1                      I 5 I 1241
s Ellobius_talpinus.LOJH01026522.1                           14207 19 +     18970 A-AGATAT--------------C---------------TAT------------AGA-GC--A--G-A
i Ellobius_talpinus.LOJH01026522.1                       I 5 I 1271
s Enhydra_lutris.KZ291758.1                               24917192 31 +  41312741 G-AGATTT-CAGTA-ACTATTTC---------------AGT------------AGA-TT--T--G-A
i Enhydra_lutris.KZ291758.1                              I 5 I 14
s Eptesicus_fuscus.JH977646.1                             12579956 31 +  14770903 G-AGATTT-CCATA-GCCATTTC---------------ACT------------AGA-TT--T--G-A
i Eptesicus_fuscus.JH977646.1                            I 5 C 0
s Equus_asinus.JREZ01000139.1                              3042493 19 -   4378816 G-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Equus_asinus.JREZ01000139.1                            I 5 C 0
s Equus_caballus.CM000403.2                               21376431 19 +  39960074 G-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Equus_caballus.CM000403.2                              I 5 C 0
s Equus_przewalskii.KK951119.1                              412413 19 -    498745 G-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Equus_przewalskii.KK951119.1                           I 5 C 0
s Erinaceus_europaeus.JH835339.1                           3667095  6 +   7059049 G-TAGTT------------------------------------------------------------
i Erinaceus_europaeus.JH835339.1                         I 5 I 5
s Erythrocebus_patas.Contig38                               264258 18 +  21539334 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Erythrocebus_patas.Contig38                            I 5 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72231 11 -    133382 --------------------------------------AGT------------AGA-TT--T--G-A
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 25 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              817 11 -      1072 --------------------------------------AGT------------AGA-TT--T--G-A
i Eubalaena_japonica.EubJap_flattened_line_257977        I 25 C 0
s Eulemur_albifrons.k141_51491                               15866 19 -     24895 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Eulemur_albifrons.k141_51491                           I 5 C 0
s Eulemur_collaris.k141_601111                               43576 19 -     70999 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Eulemur_collaris.k141_601111                           I 5 C 0
s Eulemur_coronatus.k141_384460                              87546 19 +    112731 G-ATATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Eulemur_coronatus.k141_384460                          I 5 C 0
s Eulemur_flavifrons.k141_433119                             44109 19 +     68309 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Eulemur_flavifrons.k141_433119                         I 5 C 0
s Eulemur_fulvus.k141_636316                                 54433 19 -     65740 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Eulemur_fulvus.k141_636316                             I 5 C 0
s Eulemur_macaco.k141_1562045                                25066 19 -     75513 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Eulemur_macaco.k141_1562045                            I 5 C 0
s Eulemur_mongoz.k141_232305                                 49260 19 -     97555 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Eulemur_mongoz.k141_232305                             I 5 C 0
s Eulemur_rubriventer.k141_1423786                            5984 19 +     30972 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Eulemur_rubriventer.k141_1423786                       I 5 C 0
s Eulemur_rufus.k141_514691                                  43704 19 -     52037 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Eulemur_rufus.k141_514691                              I 5 C 0
s Eulemur_sanfordi.k141_1122526                              60107 19 -    111500 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Eulemur_sanfordi.k141_1122526                          I 5 C 0
s Felis_catus.CM001381.2                                 186247906 31 - 206538554 G-AGAGGT-CAGTG-GCCATTTC---------------AGT------------AGA-GT--T--G-G
i Felis_catus.CM001381.2                                 I 5 C 0
s Felis_catus_fca126.CM031415.1                          185117692 31 - 205367284 G-AGAGGT-CAGTG-GCCATTTC---------------AGT------------AGA-GT--T--G-G
i Felis_catus_fca126.CM031415.1                          I 5 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28789 31 -     30238 G-AGAGGT-CAGTG-GCCATTTC---------------AGT------------AGA-GT--T--G-G
i Felis_nigripes.FelNig_flattened_line_31944             I 5 C 0
s Fukomys_damarensis.KN121974.1                            2923056 19 -   3816255 G-AGATCT--------------C---------------AGT------------AGA-GC--T--G-A
i Fukomys_damarensis.KN121974.1                          I 5 C 0
s Galago_moholi.ctg3793                                     126697 19 -    137831 A-AGATTT--------------C---------------AAT------------AGA-TT--T--A-A
i Galago_moholi.ctg3793                                  I 5 C 0
s Galago_senegalensis.k141_991736                            10242 19 +     22493 A-AGATTT--------------C---------------AAT------------AGA-TT--T--A-A
i Galago_senegalensis.k141_991736                        I 5 C 0
s Galagoides_demidoff.k141_561628                            22312 19 -     32986 A-AGATTT--------------C---------------AAT------------AGA-TT--T--A-A
i Galagoides_demidoff.k141_561628                        I 5 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2251 19 -     28519 G-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Galeopterus_variegatus.GalVar_scaffold_51812           I 5 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92555 11 -     95226 --------------------------------------AGT------------AGA-TT--T--G-A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 25 C 0
s Glis_glis.GliGli_scaffold_163929                            2391 19 -      6791 G-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Glis_glis.GliGli_scaffold_163929                       I 5 C 0
s Gorilla_beringei.k141_3358147                               6882 18 -      8343 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Gorilla_beringei.k141_3358147                          I 6 C 0
s Gorilla_gorilla.LT578341.1                                255889 18 - 186649187 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Gorilla_gorilla.LT578341.1                             I 6 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3459 19 -     78134 G-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Graphiurus_murinus.GraMur_scaffold_10447               I 5 C 0
s Hapalemur_alaotrensis.k141_330369                          15791 19 -     40692 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Hapalemur_alaotrensis.k141_330369                      I 5 C 0
s Hapalemur_gilberti.k141_646465                             37193 19 +     49394 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Hapalemur_gilberti.k141_646465                         I 5 C 0
s Hapalemur_griseus.k141_763500                              62061 19 -     66874 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Hapalemur_griseus.k141_763500                          I 5 C 0
s Hapalemur_meridionalis.k141_258450                         10935 19 -     42923 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Hapalemur_meridionalis.k141_258450                     I 5 C 0
s Hapalemur_occidentalis.k141_578367                         17934 19 -     53142 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Hapalemur_occidentalis.k141_578367                     I 5 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31879 31 -    327341 G-ACATTT-CAGTA-ACCATTTC---------------AGTA------------GA-TT--T--G-A
i Helogale_parvula.HelPar_flattened_line_2585            I 5 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10230 11 +     48891 --------------------------------------AGT------------AGA-TT--T--G-A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 25 C 0
s Heterocephalus_glaber.JH602082.1                         1933475 19 -  22651954 G-AGATCT--------------C---------------ACT------------AGA-GC--T--G-A
i Heterocephalus_glaber.JH602082.1                       I 4 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1323 22 +      8654 G-AGATTT--------------C---------------AGTA---T----G--AGA-TT--T--C-G
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 5 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8735 11 -     36432 --------------------------------------AGT------------AGA-TT--T--G-A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 25 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552696 31 -   1711038 G-AAATTT-CCATA-ACCATTTC---------------ACT------------CAA-TT--T--G-A
i Hipposideros_armiger.JXIK01000431.1                    I 5 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2135 31 -      2730 G-AAATTT-CCATA-ACGATTTC---------------ACT------------CGA-TT--T--A-A
i Hipposideros_galeritus.HipGal_scaffold_164997          I 5 C 0
s Hoolock_leuconedys.ctg274                                    143889 18 -    630532 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Hoolock_leuconedys.ctg274                                 I 4 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71285  7 +     83186 ------------------------------------------------------GA-TT--T--G-A
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 17 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72908 17 +    143317 G-AGATTT--------------C---------------ACT--------------A-GT--T--G-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 5 C 0
s Hylobates_agilis.k141_1155965                               6934 18 +     12352 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Hylobates_agilis.k141_1155965                          I 10 C 0
s Hylobates_klossii.k141_738755                              14118 18 +     55766 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Hylobates_klossii.k141_738755                          I 10 C 0
s Hylobates_pileatus_b.LG02                                       2053718 18 + 191637585 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Hylobates_pileatus_b.LG02                                     I 10 C 0
s Hylobates_pileatus_a.tarseq_633                            7802596 18 +  11177569 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Hylobates_pileatus_a.tarseq_633                          I 10 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8228 19 -    135385 G-AGATCT--------------T---------------ACT------------AGA-GT--T--A-A
i Hystrix_cristata.HysCri_scaffold_5660                  I 5 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387932 19 +   7955117 G-AGGTTT--------------C---------------AGT------------AGA-TT--T--A-A
i Ictidomys_tridecemlineatus.JH393364.1                  I 5 C 0
s Indri_indri.k141_2415743                                    3495 19 +     11955 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Indri_indri.k141_2415743                               I 5 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11126 11 -     16823 --------------------------------------AGT------------AGA-TT--T--G-A
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 25 C 0
s Jaculus_jaculus.JH725527.1                               1241156 12 +   9596543 ----------------------C---------------AGT------------AAC-TT--T--G-A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72966 11 -     97402 --------------------------------------AGT------------AGA-TT--T--G-A
i Kogia_breviceps.KogBre_flattened_line_3970             I 25 C 0
s Lagothrix_lagothricha.k141_246028                          44337 19 +    110728 GGAGTTA---------------C---------------AAT------------AGA-TT--T--G-A
i Lagothrix_lagothricha.k141_246028                      I 5 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    33522 30 -     49555 G-AGATTT-CCATA-GCCATT-C---------------ACT------------AGA-TT--T--G-A
i Lasiurus_borealis.LasBor_scaffold_26245                I 602 C 0
s Lemur_catta.scaffold_24                                 14760588 19 +  30322482 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Lemur_catta.scaffold_24                                I 5 C 0
s Leontocebus_fuscicollis.k141_2994775                        5244 19 -     13097 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Leontocebus_fuscicollis.k141_2994775                   I 5 C 0
s Leontocebus_illigeri.k141_2951200                           4998 19 +      5940 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Leontocebus_illigeri.k141_2951200                      I 5 C 0
s Leontocebus_nigricollis.k141_3905062                        4821 19 -      5717 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Leontocebus_nigricollis.k141_3905062                   I 5 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11207 19 -     11567 GGAGATA---------------C---------------GAT------------AGA-TT--T--G-A
i Leontopithecus_chrysomelas.k141_1327670                I 5 C 0
s Leontopithecus_rosalia.k141_349454                         12588 19 -     12945 GGAGATA---------------C---------------GAT------------AGA-TT--T--G-A
i Leontopithecus_rosalia.k141_349454                     I 5 C 0
s Lepilemur_ankaranensis.k141_567626                         10100 19 +     29618 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Lepilemur_ankaranensis.k141_567626                     I 5 C 0
s Lepilemur_dorsalis.k141_387009                             10096 19 +     31569 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Lepilemur_dorsalis.k141_387009                         I 5 C 0
s Lepilemur_ruficaudatus.k141_330196                         10106 19 +     24756 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Lepilemur_ruficaudatus.k141_330196                     I 5 C 0
s Lepilemur_septentrionalis.k141_360456                      10106 19 +     16388 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Lepilemur_septentrionalis.k141_360456                  I 5 C 0
s Leptonychotes_weddellii.KB714746.1                        814586 31 -   3914936 G-AGATTT-CAGTA-ACCATTTC---------------AGT------------AGA-TT--T--G-A
i Leptonychotes_weddellii.KB714746.1                     I 5 I 14
s Lepus_americanus.LepAme_scaffold_56121                     19250 16 +     24238 a-ttttg--------------cc---------------agt------------tta-tt--------
i Lepus_americanus.LepAme_scaffold_56121                 I 10 C 0
s Lipotes_vexillifer.KE559953.1                             342311 11 +    662738 --------------------------------------AGT------------AGA-TT--T--G-A
i Lipotes_vexillifer.KE559953.1                          I 25 C 0
s Lophocebus_aterrimus.ctg367                               335253 18 -   1826925 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Lophocebus_aterrimus.ctg367                            I 5 C 0
s Loris_lydekkerianus.k141_2031736                           12395 19 +     19643 A-AGATTT--------------C---------------AAT------------AGA-TT--T--A-A
i Loris_lydekkerianus.k141_2031736                       I 5 C 0
s Loris_tardigradus.ctg83                                  5046065 19 -   6120653 A-AGATTT--------------C---------------AAT------------AGA-TT--T--A-A
i Loris_tardigradus.ctg83                                I 5 C 0
s Loxodonta_africana.GL010049.1                           39085992 19 +  43346337 G-AAATTT--------------C---------------AGG------------AGA-TT--T--T-G
i Loxodonta_africana.GL010049.1                          I 5 C 0
s Macaca_arctoides.k141_1757516                              46642 18 -     61512 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Macaca_arctoides.k141_1757516                          I 5 C 0
s Macaca_assamensis.Contig5                                 374304 18 -  60120075 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Macaca_assamensis.Contig5                              I 5 C 0
s Macaca_cyclopis.k119_263443                                26572 18 +     30207 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Macaca_cyclopis.k119_263443                            I 5 C 0
s Macaca_fascicularis.k141_1617581                            1410 18 -      5035 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Macaca_fascicularis.k141_1617581                       I 5 C 0
s Macaca_fuscata.k119_546792                                 26525 18 +     30527 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Macaca_fuscata.k119_546792                             I 5 C 0
s Macaca_leonina.k141_321385                                 37701 18 -     50087 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Macaca_leonina.k141_321385                             I 5 C 0
s Macaca_maura.k141_1103459                                  47445 18 +     51645 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Macaca_maura.k141_1103459                              I 5 C 0
s Macaca_mulatta.NC_041758.1                                416648 18 - 187317192 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Macaca_mulatta.NC_041758.1                             I 5 C 0
s Macaca_nemestrina.KQ007038.1                              400878 18 +  25927173 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Macaca_nemestrina.KQ007038.1                           I 5 C 0
s Macaca_nigra.k141_2818840                                  50050 18 -     62418 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Macaca_nigra.k141_2818840                              I 5 C 0
s Macaca_radiata.k141_2139468                                 2581 18 +     14901 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Macaca_radiata.k141_2139468                            I 5 C 0
s Macaca_siberu.k141_2185972                                 46522 18 +     59329 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Macaca_siberu.k141_2185972                             I 5 C 0
s Macaca_silenus.Contig273                                  272430 18 +    668171 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Macaca_silenus.Contig273                               I 5 C 0
s Macaca_thibetana.k99_45532                                  1068 18 -      5049 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Macaca_thibetana.k99_45532                             I 5 C 0
s Macaca_tonkeana.k141_339739                                 4228 18 +     17132 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Macaca_tonkeana.k141_339739                            I 5 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224324 31 -    270270 G-AGATTT-CCATA-ACCATGTC---------------TCT------------AGA-TT--T--G-A
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 5 C 0
s Mandrillus_leucophaeus.scaffold280                        323718 18 +  24302211 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Mandrillus_leucophaeus.scaffold280                     I 5 C 0
s Mandrillus_sphinx.Contig270                               358549 18 -    752769 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Mandrillus_sphinx.Contig270                            I 5 C 0
s Manis_javanica.JSZB01003497.1                             674635 31 -    737560 G-AGATTT-CACTA-ACCATTTC---------------AGT------------AGA-TC--T--T-A
i Manis_javanica.JSZB01003497.1                          I 5 C 0
s Manis_pentadactyla.KN006162.1                             221935 31 +    317179 G-AGATTT-CAGTA-ACCATTTC---------------AGT------------AGA-TC--T--T-A
i Manis_pentadactyla.KN006162.1                          I 5 C 0
s Marmota_marmota.CZRN01000018.1                           7502146 19 +  40650429 G-AGGTTT--------------C---------------AGT------------AGA-CT--T--A-A
i Marmota_marmota.CZRN01000018.1                         I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151478 31 +    207569 G-AGATTT-CTGTA-ACCGTTTT---------------ACT------------AGA-TT--T--G-A
i Megaderma_lyra.MegLyr_scaffold_4542                    I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27307 31 -     74585 G-AGATTT-CAGTA-ACCATTTC---------------AGT------------GGA-TT--T--G-A
i Mellivora_capensis.MelCap_flattened_line_19308         I 5 I 14
s Meriones_unguiculatus.MerUng_scaffold_7390                 51221 19 -    140813 A-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Meriones_unguiculatus.MerUng_scaffold_7390             I 5 I 694
s Mesocricetus_auratus.KB708134.1                         17430292 19 +  29670104 A-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Mesocricetus_auratus.KB708134.1                        I 5 I 1313
s Mesoplodon_bidens.MesBid_scaffold_6114                     88595 11 +     93471 --------------------------------------AGT------------AGA-TT--T--G-A
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 25 C 0
s Mico_argentatus.k141_582562                                11369 19 +     17804 GGAGATA---------------C---------------GAT------------AGA-CT--T--G-A
i Mico_argentatus.k141_582562                            I 5 C 0
s Mico_humeralifer.k141_1180625                              11869 19 -     12984 GGAGATA---------------C---------------GAT------------AGA-CT--T--G-A
i Mico_humeralifer.k141_1180625                          I 5 C 0
s Mico_schneideri.k141_1877700                                     20185 19 -     26561 GGAGATA---------------C---------------GAT------------AGA-CT--T--G-A
i Mico_schneideri.k141_1877700                                 I 5 C 0
s Microcebus_murinus.CM007674.1                           74985938 19 +  93316391 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Microcebus_murinus.CM007674.1                          I 5 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47780 19 +    145209 G-AGACT----G----------G---------------AGT------------CGG-TT--A--C-A
i Microgale_talazaci.MicTal_scaffold_6613                I 5 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186163 31 +    200668 G-AGATTT-CCATA-ACCATTTC---------------ACT------------AGA-AC--T--G-A
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 5 C 0
s Microtus_ochrogaster.CM001695.1                         15963711 19 +  27267610 A-AGATGT--------------C---------------TAT------------AGA-TT--T--G-A
i Microtus_ochrogaster.CM001695.1                        I 5 I 1219
s Miniopterus_natalensis.LDJU01000034.1                    6364312 31 -   8254450 G-AGATTT-CCATA-ACCATTTC---------------ACT------------AGA-AT--T--G-A
i Miniopterus_natalensis.LDJU01000034.1                  I 5 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43219 31 -     48117 G-AGATTT-CCATA-ACCATTTC---------------ACT------------AGA-AT--T--G-A
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 5 C 0
s Miopithecus_ogouensis.k141_1534655                         23753 18 -     27822 C-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Miopithecus_ogouensis.k141_1534655                     I 5 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9597 31 +     27589 G-AGATTT-CAGTA-ACCATTTC---------------AGT------------AGA-TT--T--G-A
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 5 I 14
s Mirza_zaza.k141_766280                                     53721 18 -     62432 G-AGATTT--------------T---------------AAT-------------GA-TT--T--G-A
i Mirza_zaza.k141_766280                                 I 5 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360700 11 +    437263 --------------------------------------AGT------------AGA-TT--T--G-A
i Monodon_monoceros.MonMon_M_scaffold_103                I 25 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180396 31 +    366855 C-AGATTT-CCGTA-AACATTTC---------------ACA------------AGA-AT--T--G-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 5 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26675 11 -     82753 --------------------------------------AGT------------AGA-TT--T--G-A
i Moschus_moschiferus.MosMos_scaffold_13123              I 25 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19612 31 -     63510 G-ACATTT-CAGTA-ACCATTTC---------------AGTA------------GA-TT--T--G-A
i Mungos_mungo.MunMun_flattened_line_18455               I 5 C 0
s Murina_feae.MurFea_scaffold_17764                          40240 31 +     47283 G-AGATTT-CCATA-GCCAGTTC---------------ACT------------AGA-TT--T--G-A
i Murina_feae.MurFea_scaffold_17764                      I 5 C 0
s Mus_caroli.LT608237.1                                   35595327 19 + 120012414 a-aaatt--------------tt---------------agt------------AAA-TTttt-----
i Mus_caroli.LT608237.1                                  I 5 I 772
s Mus_musculus.chr8                                       41688553 19 + 129401213 a-aaatt--------------tt---------------agT------------AGA-TTttt-----
i Mus_musculus.chr8                                      I 5 I 743
s Mus_spretus.CM004101.1                                  39497847 19 + 130317789 a-aaatt--------------tt---------------agt------------AGA-TTTTT-----
i Mus_spretus.CM004101.1                                 I 5 I 734
s Muscardinus_avellanarius.MusAve_scaffold_12866             85298 19 -     86153 G-GGATTT--------------C---------------AGT------------GGA-CT--T--G-A
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 5 C 0
s Mustela_putorius.JH418006.1                             14356213 31 +  14710649 G-AGATTT-CAGTA-ACTATTTC---------------AGT------------AGA-TT--T--G-A
i Mustela_putorius.JH418006.1                            I 5 I 14
s Myocastor_coypus.MyoCoy_scaffold_15261                     64203 19 +     67721 G-AGATCT--------------T---------------GCT------------CTA-GT--T--G-A
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 5 C 0
s Myotis_brandtii.KE162005.1                               9794520 31 +  10118263 G-AGATTT-CCATA-GCCATTTC---------------ACT------------AGA-TT--T--G-A
i Myotis_brandtii.KE162005.1                             I 5 C 0
s Myotis_davidii.KB100139.1                                4388694 31 +   6019432 G-AGATTT-CCATA-GCCATTTC---------------ACT------------AGA-TT--T--G-G
i Myotis_davidii.KB100139.1                              I 5 C 0
s Myotis_lucifugus.GL429869.1                               384720 31 +   4330536 G-AGATTT-CCATA-GCCATTTC---------------ACT------------AGA-TT--T--G-A
i Myotis_lucifugus.GL429869.1                            I 5 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3514 31 +     18357 G-AGATTT-CCATA-GCCATTTC---------------ACT------------AGA-TT--T--G-A
i Myotis_myotis.MyoMyo_scaffold_66571                    I 5 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120874 19 +    130748 G-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 5 C 0
s Nannospalax_galili.KL204047.1                             947806 19 +   3037898 G-AGATTT--------------T---------------AGT------------AGA-TT--T--G-A
i Nannospalax_galili.KL204047.1                          I 5 C 0
s Nasalis_larvatus.k141_1350636                              30410 18 +     34575 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Nasalis_larvatus.k141_1350636                          I 5 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233366 11 -   7148211 --------------------------------------AGT------------AGA-TT--T--G-A
i Neophocaena_asiaeorientalis.KZ687982.1                 I 25 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129009 31 -    149072 G-AGATTT-CCGTA-ACCATTCC---------------TCT------------AGA-CT--T--G-A
i Noctilio_leporinus.NocLep_scaffold_7894                I 5 C 0
s Nomascus_annamensis.k141_1771965                           54820 18 -    132029 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Nomascus_annamensis.k141_1771965                       I 4 C 0
s Nomascus_concolor.k141_735679                              10915 18 -     16345 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Nomascus_concolor.k141_735679                          I 4 C 0
s Nomascus_gabriellae.k141_57920                             16800 18 +     22201 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Nomascus_gabriellae.k141_57920                         I 4 C 0
s Nomascus_siki_b.tarseq_93                            8415021 18 -  22158432 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Nomascus_siki_b.tarseq_93                          I 4 C 0
s Nomascus_siki_a.k141_941534                                  27198 18 -     54323 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Nomascus_siki_a.k141_941534                              I 4 C 0
s Nycticebus_bengalensis.LG01                             93639292 19 + 196305487 A-AGATTT--------------C---------------AAT------------AGA-TT--T--A-A
i Nycticebus_bengalensis.LG01                            I 5 C 0
s Nycticebus_coucang.k141_1296080                             1895 19 -      9413 A-AGATTT--------------C---------------AAT------------AGA-TT--T--A-A
i Nycticebus_coucang.k141_1296080                        I 5 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566675 19 - 199412804 A-AGATTT--------------C---------------AAT------------AGA-TT--T--A-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 5 C 0
s Ochotona_princeps.JH802162.1                             2557979 19 -   3988456 G-AGATT---A-----------C---------------AAT------------ACA-TT--G--G-A
i Ochotona_princeps.JH802162.1                           I 5 C 0
s Octodon_degus.JH651603.1                                11056294 19 -  11899542 G-AGATT----G----------T---------------GCT------------AGA-GT--T--G-A
i Octodon_degus.JH651603.1                               I 5 C 0
s Odobenus_rosmarus.KB229312.1                             1453016 31 +   2017862 G-AGATTT-CAGTA-ACCATTTC---------------AGT------------AGA-TT--T--G-A
i Odobenus_rosmarus.KB229312.1                           I 5 I 14
s Odocoileus_virginianus.KZ100018.1                         437444 11 -    630418 --------------------------------------AGT------------AGA-TT--T--G-T
i Odocoileus_virginianus.KZ100018.1                      I 25 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          15639 11 +    150152 --------------------------------------AGT------------AGA-TT--T--G-A
i Okapia_johnstoni.LVCL01S0005463.1                      I 25 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    94021 19 -    140218 A-AGATGT--------------C---------------CAT------------AGA-TT--T--G-A
i Ondatra_zibethicus.OndZib_scaffold_7387                I 5 I 1581
s Onychomys_torridus.OnyTor_scaffold_28377                    4450 19 -     41509 A-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Onychomys_torridus.OnyTor_scaffold_28377               I 1 I 1695
s Orcinus_orca.KB316932.1                                  8103768 11 +  10937097 --------------------------------------agt------------aga-tt--t--t-t
i Orcinus_orca.KB316932.1                                I 25 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                775 11 +     11607 G-AGATTT--------------T---------------AGA--------------------------
i Orycteropus_afer.OryAfe_flattened_line_201229          I 5 I 2
s Oryctolagus_cuniculus.CM000791.1                       107105930 17 - 174332312 aaatttg--------------cc---------------agt------------tta-tt--------
i Oryctolagus_cuniculus.CM000791.1                       I 10 C 0
s Otolemur_crassicaudatus.k141_649260                        41844 19 -     51505 A-AGATTT--------------C---------------AAT------------AGA-TT--T--A-A
i Otolemur_crassicaudatus.k141_649260                    I 5 C 0
s Otolemur_garnettii.GL873799.1                             354848 19 +   1103335 A-AGATTT--------------C---------------AAT------------AGA-TT--T--A-A
i Otolemur_garnettii.GL873799.1                          I 5 C 0
s Ovis_aries.CM001607.2                                   26405350 11 -  44047080 --------------------------------------AGT------------AGA-TT--T--G-A
i Ovis_aries.CM001607.2                                  I 25 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       5869 11 +     17875 --------------------------------------AGT------------AGA-TT--T--G-A
i Ovis_canadensis.OviCan_scaffold_67953                  I 25 C 0
s Pan_troglodytes.CM009242.2                               1473917 18 - 189151597 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Pan_troglodytes.CM009242.2                             I 6 I 39
s Panthera_onca.PanOnc_flattened_line_3271                   25612 31 -    230217 G-AGAGGT-CAGTG-GCCATTTC---------------AGT------------AGA-GT--T--G-G
i Panthera_onca.PanOnc_flattened_line_3271               I 5 C 0
s Panthera_pardus.KV860321.1                              18462938 31 -  18783137 G-AGAGGT-CAGTG-GCCATTTC---------------AGT------------AGA-GT--T--G-G
i Panthera_pardus.KV860321.1                             I 5 C 0
s Panthera_tigris.KE722367.1                               3973597 31 +   8748460 G-AGAGGT-CAGTG-GCCATTTC---------------AGT------------AGA-GT--T--G-G
i Panthera_tigris.KE722367.1                             I 5 C 0
s Pantholops_hodgsonii.KE114653.1                          1616875 11 +   2937107 --------------------------------------AGT------------AGA-TT--T--G-A
i Pantholops_hodgsonii.KE114653.1                        I 33 C 0
s Papio_anubis.CM001495.2                                   244727 18 - 183742232 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Papio_anubis.CM001495.2                                I 5 C 0
s Papio_cynocephalus.k141_1507553                            11012 18 +     21308 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Papio_cynocephalus.k141_1507553                        I 5 C 0
s Papio_hamadryas.Contig39                                  293755 18 -  20919399 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Papio_hamadryas.Contig39                               I 5 C 0
s Papio_kindae.k141_2214839                                  23660 18 -     27687 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Papio_kindae.k141_2214839                              I 5 C 0
s Papio_papio.k141_3538738                                     331 18 +     10553 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Papio_papio.k141_3538738                               I 5 C 0
s Papio_ursinus.k141_5784434                                   291 18 -     10386 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Papio_ursinus.k141_5784434                             I 5 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16193 30 +     78924 G-ACATTT-CAGTA-ACCATTTC---------------AGT-------------GG-TT--T--G-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 5 C 0
s Perodicticus_ibeanus.k141_1921260                          28175 19 +     31479 A-AGATTT--------------C---------------AAT------------AGA-TT--T--A-A
i Perodicticus_ibeanus.k141_1921260                      I 5 C 0
s Perodicticus_potto.k141_1854441                            20543 19 -     24908 A-AGATTT--------------C---------------AAT------------AGA-TT--T--A-A
i Perodicticus_potto.k141_1854441                        I 5 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        2997 19 +      9367 G-AGATTT--------------C---------------TAT------------AGA-AT--T--G-A
i Perognathus_longimembris.PerPac_flattened_line_89005   I 5 C 0
s Peromyscus_maniculatus.KI615324.1                         247660 19 +  18517816 A-AGATTT--------------C---------------AGT------------AGA-TT--T--T-A
i Peromyscus_maniculatus.KI615324.1                      I 1 I 1708
s Petromus_typicus.PetTyp_scaffold_17301                     33037 19 -     56120 G-AGATCT--------------C---------------ACT------------AGA-CC--T--G-A
i Petromus_typicus.PetTyp_scaffold_17301                 I 5 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5294 11 -     63832 --------------------------------------AGT------------AGA-TT--T--G-A
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 25 C 0
s Piliocolobus_badius.k141_2704958                            3841 18 +     55023 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Piliocolobus_badius.k141_2704958                       I 5 C 0
s Piliocolobus_gordonorum.k141_381342                         3379 18 -     89929 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Piliocolobus_gordonorum.k141_381342                    I 5 C 0
s Piliocolobus_kirkii.k141_1310104                            3969 18 +     40849 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Piliocolobus_kirkii.k141_1310104                       I 5 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255644 18 +  14605196 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Piliocolobus_tephrosceles.PDMG02000141.1               I 5 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5098 31 +     22231 G-ATATTT-CTATA-GCCATTTC---------------ACT------------AGA-TT--T--G-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 10 C 0
s Pithecia_albicans.k141_1239476                             65879 19 +    207309 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Pithecia_albicans.k141_1239476                         I 5 C 0
s Pithecia_chrysocephala.k141_785207                          6971 19 -     25401 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Pithecia_chrysocephala.k141_785207                     I 5 C 0
s Pithecia_hirsuta.k141_640380                               32715 19 +     58159 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Pithecia_hirsuta.k141_640380                           I 5 C 0
s Pithecia_mittermeieri.k141_1280039                         32991 19 +     63561 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Pithecia_mittermeieri.k141_1280039                     I 5 C 0
s Pithecia_pissinattii.k141_878371                           32751 19 +     51148 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Pithecia_pissinattii.k141_878371                       I 5 C 0
s Pithecia_pithecia.tarseq_165                              557721 19 -   4542175 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Pithecia_pithecia.tarseq_165                           I 5 C 0
s Pithecia_vanzolinii.k141_1369553                           32735 19 +     51125 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Pithecia_vanzolinii.k141_1369553                       I 5 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2311 11 +     19503 --------------------------------------AGT------------AGA-TT--T--G-A
i Platanista_gangetica.PlaMin_flattened_line_83166       I 25 C 0
s Plecturocebus_bernhardi.k141_2549090                        9153 19 +     39866 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Plecturocebus_bernhardi.k141_2549090                   I 5 C 0
s Plecturocebus_brunneus.k141_862875                          4235 19 -      9282 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Plecturocebus_brunneus.k141_862875                     I 5 C 0
s Plecturocebus_caligatus.k141_1382851                       43639 19 -     87950 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Plecturocebus_caligatus.k141_1382851                   I 5 C 0
s Plecturocebus_cinerascens.k141_1164729                     44033 19 -     88961 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Plecturocebus_cinerascens.k141_1164729                 I 5 C 0
s Plecturocebus_cupreus.k141_2351393                          8731 19 -     39403 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Plecturocebus_cupreus.k141_2351393                     I 5 C 0
s Plecturocebus_dubius.k141_1058799                          43682 19 +     87928 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Plecturocebus_dubius.k141_1058799                      I 5 C 0
s Plecturocebus_grovesi.k141_2013005                          8730 19 -     60166 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Plecturocebus_grovesi.k141_2013005                     I 5 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15667 19 -     67232 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Plecturocebus_hoffmannsi.k141_3303950                  I 5 C 0
s Plecturocebus_miltoni.k141_349282                          43583 19 -     90634 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Plecturocebus_miltoni.k141_349282                      I 5 C 0
s Plecturocebus_moloch.k141_1031110                          45050 19 +     89403 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Plecturocebus_moloch.k141_1031110                      I 5 C 0
s Pongo_abelii.CM009266.2                                   179030 18 - 189387572 G-AGATA---------------C---------------AAT------------AGA-TT--T--C-A
i Pongo_abelii.CM009266.2                                I 5 C 0
s Pongo_pygmaeus.ctg66                                      193847 18 -   9816681 G-AGATA---------------C---------------AGT------------AGA-TT--T--C-A
i Pongo_pygmaeus.ctg66                                   I 5 C 0
s Presbytis_comata.k141_1230337                              28989 18 +     69807 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Presbytis_comata.k141_1230337                          I 5 C 0
s Presbytis_mitrata.k141_584736                              46170 18 -     80239 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Presbytis_mitrata.k141_584736                          I 5 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5314 22 +      7663 G-AGATTT--------------C---------------AGTA---T----G--AGA-TT--T--C-A
i Procavia_capensis.ProCapCap_scaffold_165387            I 5 C 0
s Prolemur_simus.MPIZ01000396.1                            1983736 19 +   4620579 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Prolemur_simus.MPIZ01000396.1                          I 5 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567246 19 -   2598838 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Propithecus_coquerelli.NW_012148875.1                  I 5 C 0
s Propithecus_coronatus.k141_209299                           4884 19 -      7103 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Propithecus_coronatus.k141_209299                      I 5 C 0
s Propithecus_diadema.k141_153680                             5481 19 -     11706 G-AGATTT--------------T---------------AAT------------ATA-TT--T--G-A
i Propithecus_diadema.k141_153680                        I 5 C 0
s Propithecus_edwardsi.k141_635656                            9218 19 -     30655 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Propithecus_edwardsi.k141_635656                       I 5 C 0
s Propithecus_perrieri.k141_1496898                          35532 19 +     46564 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Propithecus_perrieri.k141_1496898                      I 5 C 0
s Propithecus_tattersalli.k141_1127767                       95811 19 -     98465 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Propithecus_tattersalli.k141_1127767                   I 5 C 0
s Propithecus_verreauxi.k141_1047036                          9450 19 +     35169 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Propithecus_verreauxi.k141_1047036                     I 5 C 0
s Psammomys_obesus.NESX01036366.1                            38734 19 +     52041 A-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Psammomys_obesus.NESX01036366.1                        I 5 I 675
s Pteronotus_parnellii.KE847780.1                            53289 31 -     66298 G-AGATTT-CCATA-ACCATTTC---------------ACT------------AGA-AT--T--T-A
i Pteronotus_parnellii.KE847780.1                        I 5 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5787 31 -     18639 G-AGATTT-CAGTA-ACTATTTC---------------AGG------------AGA-TT--T--G-A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 5 I 14
s Pteropus_alecto.KB030862.1                               5841896 31 -  28871421 G-AGATTT-CCATA-ATCATGTC---------------ACT------------AGA-TT--T--G-A
i Pteropus_alecto.KB030862.1                             I 5 C 0
s Pteropus_vampyrus.KN525825.1                             3538411 31 -   4952924 G-AGATTT-CCATA-ATCATGTC---------------ACT------------AGA-TT--T--G-A
i Pteropus_vampyrus.KN525825.1                           I 5 C 0
s Puma_concolor.QAVW01001104.1                            18100255 31 +  38429054 G-AGAGGT-CAGTG-GCCATTTC---------------AGT------------AGA-GT--T--G-G
i Puma_concolor.QAVW01001104.1                           I 5 C 0
s Pygathrix_cinerea.k141_1153803                             28356 18 +     91421 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Pygathrix_cinerea.k141_1153803                         I 5 C 0
s Pygathrix_nigripes_b.ctg100                                  154840 18 -   7812017 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Pygathrix_nigripes_b.ctg100                               I 5 C 0
s Pygathrix_nigripes_a.k141_215492                              9213 18 +     72585 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Pygathrix_nigripes_a.k141_215492                         I 5 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54358 11 +     55069 --------------------------------------AGT------------AGA-TT--T--G-A
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 25 C 0
s Rattus_norvegicus.chr16                                 37024020 23 -  90668790 A-AAAtt--------------tc---------------agt------------aga-tttttttt-a
i Rattus_norvegicus.chr16                                I 5 I 457
s Rhinolophus_sinicus.LVEH01000134.1                       2915861 31 +   3329780 G-AGATTT-CCATA-ACCATTAC---------------ACT------------AGA-TT--T--G-A
i Rhinolophus_sinicus.LVEH01000134.1                     I 5 C 0
s Rhinopithecus_bieti.k119_778604                             2943 18 +      7119 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Rhinopithecus_bieti.k119_778604                        I 5 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123558 18 + 195417433 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Rhinopithecus_roxellana.NC_044550.1                    I 5 C 0
s Rhinopithecus_strykeri.ctg102                             237785 18 -   7961872 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Rhinopithecus_strykeri.ctg102                          I 5 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76395 31 -    116970 G-AGATTT-CCATA-ACTGTGTC---------------ACT------------AGA-TT--T--G-A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 5 C 0
s Saguinus_bicolor.k141_1429097                               5119 19 +     27962 GGAGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Saguinus_bicolor.k141_1429097                          I 5 C 0
s Saguinus_geoffroyi.k141_3779887                             5010 19 +      6077 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Saguinus_geoffroyi.k141_3779887                        I 5 C 0
s Saguinus_imperator.k141_1898058                             5103 19 +      5971 GGAGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Saguinus_imperator.k141_1898058                        I 5 C 0
s Saguinus_inustus.k141_2469308                               5021 19 +      5932 GGAGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Saguinus_inustus.k141_2469308                          I 5 C 0
s Saguinus_labiatus.k141_2380921                              3366 19 -      4390 GGAGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Saguinus_labiatus.k141_2380921                         I 5 C 0
s Saguinus_midas.LG03                                       392803 19 - 209938924 GGAGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Saguinus_midas.LG03                                    I 5 C 0
s Saguinus_mystax.k141_8077960                                4969 19 +      5979 GGAGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Saguinus_mystax.k141_8077960                           I 5 C 0
s Saguinus_oedipus.k141_1280589                               1539 19 -     22275 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Saguinus_oedipus.k141_1280589                          I 5 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9037 11 +     16473 --------------------------------------AGT------------AGA-TT--T--G-A
i Saiga_tatarica.SaiTat_scaffold_39512                   I 25 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110135 19 + 121099817 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Saimiri_boliviensis.NW_024100920.1                     I 5 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31702 19 -     47369 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Saimiri_cassiquiarensis.k141_1467335                   I 5 C 0
s Saimiri_macrodon.k141_1173117                              32088 19 -     79414 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Saimiri_macrodon.k141_1173117                          I 5 C 0
s Saimiri_oerstedii.k141_245838                              28779 19 -     34454 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Saimiri_oerstedii.k141_245838                          I 5 C 0
s Saimiri_sciureus.k141_1467173                              16180 19 -     22428 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Saimiri_sciureus.k141_1467173                          I 5 C 0
s Saimiri_ustus.k141_360372                                  31334 19 -     47109 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Saimiri_ustus.k141_360372                              I 5 C 0
s Sapajus_apella.ctg103                                     239383 19 +   5703754 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Sapajus_apella.ctg103                                  I 5 C 0
s Sapajus_macrocephalus.k141_796559                           8973 19 +     21866 GGAGATA---------------C---------------AAT------------AGA-TT--T--G-A
i Sapajus_macrocephalus.k141_796559                      I 5 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116953  2 +    313613 G-A----------------------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 5 C 0
s Semnopithecus_entellus.k141_158471                         26685 18 +     27374 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Semnopithecus_entellus.k141_158471                     I 5 I 12
s Semnopithecus_hypoleucos.k141_1910531                      30197 18 +     58920 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Semnopithecus_hypoleucos.k141_1910531                  I 5 I 12
s Semnopithecus_johnii.k141_843753                           16695 18 -     45317 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Semnopithecus_johnii.k141_843753                       I 5 I 12
s Semnopithecus_priam.k141_714795                            24353 18 -     42441 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Semnopithecus_priam.k141_714795                        I 5 I 12
s Semnopithecus_schistaceus.k141_1432920                     27031 18 -     29113 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Semnopithecus_schistaceus.k141_1432920                 I 5 I 12
s Semnopithecus_vetulus.k141_244474                          30106 18 -     48123 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Semnopithecus_vetulus.k141_244474                      I 5 I 12
s Sigmodon_hispidus.SigHis_scaffold_20193                    50032 19 +     77746 A-AGATTT--------------C---------------AGT------------GAA-TT--T--G-A
i Sigmodon_hispidus.SigHis_scaffold_20193                I 1 I 1133
s Solenodon_paradoxus.SolPar_flattened_line_126            1865306 11 -   1910179 --------------------------------------AGT------------AGT-TT--T--G-A
i Solenodon_paradoxus.SolPar_flattened_line_126          I 12 C 0
s Sorex_araneus.JH798187.1                                 4672388 10 +  18376816 ----------------------------------------c------------aga-tt--t--gaa
i Sorex_araneus.JH798187.1                               I 12 C 0
s Spermophilus_dauricus.KZ294078.1                         1869510 19 +   3870691 G-AGGTTT--------------C---------------AAT------------AGA-TT--T--A-A
i Spermophilus_dauricus.KZ294078.1                       I 5 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7871 31 -     97271 G-AGATTT-CAGTAAGC-ATGTC---------------AGT------------AGA-TT--T--G-G
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 I 14
s Suricata_suricatta.SurSur_flattened_line_6629             126029 31 +    196729 G-ACATTT-CAGTA-ACCATTTC---------------AGTA------------GA-TT--T--G-A
i Suricata_suricatta.SurSur_flattened_line_6629          I 5 C 0
s Sus_scrofa.CM000828.4                                    6645079 11 +  69701581 --------------------------------------AGT------------AGA-TT--T--G-A
i Sus_scrofa.CM000828.4                                  I 13 C 0
s Symphalangus_syndactylus.tarseq_199                       392286 18 +   1523678 G-AGATG---------------C---------------AGT------------AGA-TT--T--G-A
i Symphalangus_syndactylus.tarseq_199                    I 5 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15443 31 +     22964 G-AGATTTTCA-TA-GCCATTTC---------------ACT------------AGA-AT--C--G-A
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 5 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3865 19 +      5583 G-AGATTT--------------C---------------AGT------------AGA-TT--T--G-A
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 5 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192754 19 +    199430 G-AGATTT--------------C---------------AGT------------AGA-TT--T--A-A
i Tapirus_indicus.TapInd_scaffold_7432                   I 5 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106722 19 -    539355 G-AGATTT--------------C---------------AGT------------AGA-TT--T--A-A
i Tapirus_terrestris.TapTer_scaffold_755                 I 5 C 0
s Tarsius_lariang.k141_1733899                                1799 19 +      9917 G-AGATCT--------------C---------------AAT------------AGA-TT--T--G-A
i Tarsius_lariang.k141_1733899                           I 5 C 0
s Tarsius_wallacei.k141_226975                                8597 19 +     20590 G-AGATCT--------------C---------------AAT------------AGA-TT--T--G-A
i Tarsius_wallacei.k141_226975                           I 5 C 0
s Theropithecus_gelada.CM009954.1                           354536 18 - 186847797 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Theropithecus_gelada.CM009954.1                        I 5 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25193 19 -     33621 G-AGATCT--------------C---------------ACT------------AGA-CC--T--G-A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 5 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20833 19 -     31044 G-AGATTT--------------C---------------ACA------------AGA-CT--T--T-C
i Tolypeutes_matacus.TolMat_scaffold_31955               I 5 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481288 31 -    610378 G-AGATTT-CCATG-ACCATTTC---------------ACT------------AGA-GT--G--G-A
i Tonatia_saurophila.TonSau_scaffold_294                 I 5 C 0
s Trachypithecus_auratus.k141_1189070                        22230 18 +     26378 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Trachypithecus_auratus.k141_1189070                    I 5 I 12
s Trachypithecus_crepusculus.k141_539312                     34906 18 -     78344 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Trachypithecus_crepusculus.k141_539312                 I 5 I 12
s Trachypithecus_cristatus.k141_180416                       21555 18 +     25722 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Trachypithecus_cristatus.k141_180416                   I 5 I 12
s Trachypithecus_francoisi.k141_1453105                      29862 18 -     62838 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Trachypithecus_francoisi.k141_1453105                  I 5 I 12
s Trachypithecus_geei.k141_1001272                           29906 18 +     46913 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Trachypithecus_geei.k141_1001272                       I 5 I 12
s Trachypithecus_germaini.k141_57262                         10713 18 -     28527 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Trachypithecus_germaini.k141_57262                     I 5 I 12
s Trachypithecus_hatinhensis.k141_31479                      31797 18 -     64340 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Trachypithecus_hatinhensis.k141_31479                  I 5 I 12
s Trachypithecus_laotum.k141_928651                          29835 18 -     63452 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Trachypithecus_laotum.k141_928651                      I 5 I 12
s Trachypithecus_leucocephalus.k141_96450                    11282 18 +     22490 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Trachypithecus_leucocephalus.k141_96450                I 5 I 12
s Trachypithecus_melamera.k141_591572                         4705 18 -      6147 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Trachypithecus_melamera.k141_591572                    I 5 I 12
s Trachypithecus_obscurus.k141_848057                        11618 18 -     13050 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Trachypithecus_obscurus.k141_848057                    I 5 I 12
s Trachypithecus_phayrei.ctg124                             256848 18 -   6242583 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Trachypithecus_phayrei.ctg124                          I 5 I 12
s Trachypithecus_pileatus.k141_2622778                        2876 18 +     19340 G-AGATA---------------C---------------AGT------------AGA-TT--T--G-A
i Trachypithecus_pileatus.k141_2622778                   I 5 I 12
s Tragulus_javanicus.TraJav_scaffold_3462                   174645 11 -    200418 --------------------------------------AGT------------AGA-TT--T--G-A
i Tragulus_javanicus.TraJav_scaffold_3462                I 25 C 0
s Trichechus_manatus.JH594705.1                            6482687 19 -  10818551 G-AGATTT--------------C---------------AGT------------AGA-TT--G--T-A
i Trichechus_manatus.JH594705.1                          I 5 C 0
s Tupaia_chinensis.KB320699.1                              1835515 19 -   4065304 G-AAATTT--------------C---------------ATC------------AGA-TT--T--G-G
i Tupaia_chinensis.KB320699.1                            I 23 I 6
s Tupaia_tana.TupTan_flattened_line_394                       9536 19 -     70247 G-AAATTT--------------C---------------ATC------------AGA-TT--C--G-G
i Tupaia_tana.TupTan_flattened_line_394                  I 5 I 6
s Tursiops_truncatus.MRVK01000835.1                       17366893 11 -  33153633 --------------------------------------AGT------------AGA-TT--T--G-A
i Tursiops_truncatus.MRVK01000835.1                      I 37 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4727 11 -     21056 --------------------------------------AGT------------ATA-TT--G--A-A
i Uropsilus_gracilis.UroGra_scaffold_46687               I 13 I 7
s Ursus_maritimus.KK499267.1                                183228 31 +   5085361 g-AGATTT-CAGTA-ACCATTTC---------------AGT------------AGA-TT--T--G-A
i Ursus_maritimus.KK499267.1                             I 5 I 15
s Varecia_rubra.k141_787544                                  26392 19 -     30710 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Varecia_rubra.k141_787544                              I 5 C 0
s Varecia_variegata.k141_289850                              25299 19 -    147434 G-AGATTT--------------T---------------AAT------------AGA-TT--T--G-A
i Varecia_variegata.k141_289850                          I 5 C 0
s Vicugna_pacos.KN270157.1                                   77421 31 +   5488506 G-AGATTT-CAGTA-ACTATTTC---------------AGT------------AGA-TT--T--G-A
i Vicugna_pacos.KN270157.1                               I 5 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175267 19 -    224448 G-AGGTGT--------------C---------------AGT------------AGA-TT--T--A-A
i Xerus_inauris.XerIna_scaffold_2302                     I 5 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30224 31 -     86975 G-AGATTT-CAGTA-ACCATTTC---------------AGT------------AGA-TT--T--G-A
i Zalophus_californianus.ZalCal_flattened_line_17732     I 5 I 14
s Zapus_hudsonius.ZapHud_scaffold_286923                      1083  9 -      1899 ----------------------------------------T------------AGC-TT--T--G-A
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Vulpes_lagopus.VulLag_flattened_line_12041                106053  0 -    112863 C
e Otocyon_megalotis.JAEUCK010005147.1                        40330  0 +    559221 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                199287  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Lycaon_pictus.CM007581.1                                41615691  0 +  59628241 C
e Canis_lupus_orion.HG994398.1                            45108117  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41616536  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          223401  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10058  0 -     23171 C
e CanFam4.chr16                                           42506422  0 +  60362399 C
e Mus_pahari.LT608297.1                                   58216936 721 +  89631738 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6591 39 +     36723 TATC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
s Acinonyx_jubatus.LLWD01001279.1                           814027 39 +   1699592 CTGT----ATGC-AT-CAT----------A--A--TT-GA----AA--G-TTCA-G-TGATTCA-ACCTA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27270 42 +     63021 TACC----ATACTTC-A-AAAT-------A--A--TG-GC----TA--G-TTCC-A-CAAATGC-ACCTG
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 933 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416500 21 +  29979442 ---------------------------------------A----TA--G-TTCC-A-TGATTCA-ACCCA
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 15 C 0
s Ailurus_fulgens.LNAC01001112.1                            216838 25 +    347723 ---------------------------------------ATTGATA--T-TTCC-A-TGATTCA-ATCCA
i Ailurus_fulgens.LNAC01001112.1                         I 14 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19651 39 -     61208 TTTT----GCACATT-G-G----------A--A--AG-GT----TA--G-TTCC-A-CAACTGG-ATCTG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49238 39 +     53615 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1269 39 +     13857 TATC----ACACATT-A-C----------A--A--TG-GG----TG--G-TTTT-C-TGATAGG-ACCTG
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17820 39 -     21945 TATC----ACACTTT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19505 39 +     32033 TATC----ACACTTT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73340 39 -     84148 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45579 39 -     78289 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45018 39 +     55831 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43468 39 -     64179 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            575 39 -      3959 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42093 39 +     45454 TAGC----ACACATC-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47742 39 +     70886 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9915 39 +     30854 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34049 39 +     42133 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586494 38 +   2318259 TGGT----ATAC-AT-TAT----------A--G--C-TGA----TA--G-TT-C-A-CGATTGG-ACCCA
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 373
s Anoura_caudifer.AnoCau_scaffold_1412                      178284 39 -    412891 TGGT----ACAC-AT-TTT----------A--A--CT-CA----TA--T-TTTC-A-TGATTGA-ACCAG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51600 26 -     68529 ------------------G----------A--G--CT-GA----TA--G-TT-C-A-CAATTGG-ACCCA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 356
s Aotus_azarae.k141_887050                                    2307 39 +     17741 TAGC----ACACATT-T-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2932 39 -     15923 TAGC----ACACATT-T-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673214 39 +   5030052 TAGC----ACACATT-T-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3208 39 -     16391 TAGC----ACACATT-T-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2767 39 -     17186 TAGC----ACACATT-T-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17283 39 -     32367 TACT----ATACATT-T-T----------A--A--CT-GA----TA--T-TTTC-C-TGATTGA-ACTGG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21343 39 -     45910 TACT----ACACATT-A-G----------A--A--CA-AA----TA--G-CTCC-A-TGATTGT-ACCTG
i Arctocebus_calabarensis.k141_1364444                   I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6539 39 -     15198 TGGT----ACAC-AT-TTT----------A--A--GT-GA----TA--T-TTCC-A-CGATTGA-ATCAG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275805 39 +  21539123 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              11972 39 +     48076 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7107 39 -     28759 TAGC----ACACATT-A-T----------A--G--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34662 39 +     44353 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50032 39 -     71267 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24090 39 -     33135 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7371 39 +     11645 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7379 39 -     19611 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964628 39 -  23207421 TAGT----ATAC-CT-TGT----------A--A--CT-GA----TA--G-TTCC-A-CCATTGG-ACCCA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1128 39 -     25979 TAGT----ATAC-CT-TGT----------A--A--CT-GA----TT--G-TTCC-A-CCATTGG-ACCCA
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87501 38 +    124022 TGGT----ATAC-AT-TAT----------A--G--CT-GA----TA--G-TT-C-A-CGATTGG-ACCCA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 372
s Bison_bison.KN261452.1                                     23041 38 +    288883 TGGT----ATAC-AT-TAT----------A--G--CT-GA----TC--G-TT-C-A-CGATCGG-ACCCA
i Bison_bison.KN261452.1                                 C 0 I 367
s Bos_indicus.CM003047.1                                  20357431 38 +  48749331 TGGT----ATAC-AT-TAT----------A--G--CT-GA----TC--G-TT-C-A-CGATCGG-ACCCA
i Bos_indicus.CM003047.1                                 C 0 I 367
s Bos_mutus.JH880303.1                                      755995 38 +   1948126 TGGT----ATAC-AT-TAT----------A--G--CT-GA----TC--G-TT-C-A-CGATCGG-ACCCA
i Bos_mutus.JH880303.1                                   C 0 I 367
s Bos_taurus.CM000203.6                                   27546137 38 -  45695690 TGGT----ATAC-AT-TAT----------A--G--CT-GA----TC--G-TT-C-A-CGATCGG-ACCCA
i Bos_taurus.CM000203.6                                  C 0 I 367
s Bubalus_bubalis.KI419123.1                               1531154 38 -   4408762 TGGT----ATAC-AT-TAT----------A--G--CT-GA----TT--G-TT-C-A-CGATAGG-ACCCA
i Bubalus_bubalis.KI419123.1                             C 0 I 358
s Cacajao_ayresi.k141_96119                                   8899 39 +     28062 CAGC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44193 39 -     91139 CAGC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21719 39 +     95584 CAGC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21632 39 +    119600 CAGC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11287 39 +     18648 TAGC----ACCCATT-A-T----------A--A--TG-GA----TG--G-TTT-TC-TGACTGG-ACCTG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10803 39 -     13885 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2890 38 -      8861 TAGC----ACCCATT-A-T----------A--G--TG-GA----TG--G-TTT--A-TGACTGG-ACCTG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455282 38 + 189096842 TAGC----ACCCATT-A-T----------A--G--TG-GA----TG--G-TTT--C-TGACTGG-ACCTG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2805 38 +      8664 TAGC----ACCCATT-A-T----------A--G--TG-GA----TG--G-TTT--A-TGACTGG-ACCTG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632118 38 +  17673402 TAGT----GTAC-AT-TAT----------T--A--CT-GG----TA--G-TTCC-A-CAATG-G-ACCCA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666405 38 +   7040546 TAGT----GTAC-AT-TAT----------T--A--CT-GG----TA--G-TTCC-A-CAATG-G-ACCCA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210063 38 +   1652518 TAGT----GTAC-AT-TAC----------T--A--CT-GG----TA--G-TTCC-A-CAATG-G-ACCCA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506422  6 +  60362399 ---------------------------------------------------------------A-ACCCA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10058  6 -     23171 ---------------------------------------------------------------A-ACCCA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223401  6 +   9314153 ---------------------------------------------------------------A-ACCCA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616536  6 +  59632846 ---------------------------------------------------------------A-ACCCA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108117  6 -  63665305 ---------------------------------------------------------------A-ACCCA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410223 37 -  46296322 TGGT----ATAC-AT-TAT----------A--C--C--AT----CA--G-TT-C-A-CGATTGG-ACCCA
i Capra_aegagrus.CM003241.1                              C 0 I 374
s Capra_hircus.CM004588.1                                 26592497 37 +  44709034 TGGT----ATAC-AT-TAT----------A--C--C--AT----CA--G-TT-C-A-CGATTGG-ACCCA
i Capra_hircus.CM004588.1                                C 0 I 374
s Capromys_pilorides.CapPil_scaffold_762519                    638 27 -      1607 TCCC----ATGCATT-A-T----------A--A--AT-GA----TA--G-TTCC-A--------------
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271594 39 +    496798 GACT----ACACATT-A-T----------A--A--CG-GA----TA--G-TTTC-A-CAACTGG-ACCTG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1409 39 +      9923 TGGT----ACAC-AC-GTT----------A--A--GT-GA----TA--T-TTCC-A-TGACTGA-ATCAG
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28776 38 -     39886 TACC----AT-CATT-A-T----------A--A--CT-GA----TA--G-TTTC-A-TGATTGG-ATATG
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80693 39 -    217609 TAGA----ATGC-GT-TGT----------A--A--CT-GA----CA--G-TTCC-A-CAGTGGG-ACCCA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997527 26 +  23392119 TACC----ATGCAT--T-T----------A--A--AT-GA----TA--G-CTCC-A--------------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000969 26 +  23407841 TACC----ATGCAT--A-T----------A--A--AT-GA----TA--G-TTCC-A--------------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64047 27 -     66877 TACC----ATGCAT-TA-T----------A--A--AT-GA----TA--G-TTCC-A--------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6202 39 -     12580 TAGC----ACCCATT-A-T----------A--A--TG-GA----TG--G-TTT-TC-TGACTGG-ACCTG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44260 39 +     53515 TAGC----ACCCATT-A-T----------A--A--TG-GA----TG--G-TTT-TC-TGACTGG-ACCTG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374028 39 -  26074798 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9082 39 -     34880 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68178 39 -     89041 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3555 39 -      5494 GACT----ACACATT-A-T----------A--A--CA-GA----TA--G-TTTC-A-CAACTGG-ACCTG
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493313 39 -  27778364 TAGT----ATAC-AT-TGT----------A--A--TT-GA----TA--G-TTCC-A-TGATTGG-ATCTG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20146 39 +     27315 TAGT----ATAC-AT-TGT----------A--A--TT-GA----TA--G-TTCC-A-TGATTGG-ATCTG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142386 39 -   4669795 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46125 39 +     47900 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1558 39 -     14410 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45942 39 -    148725 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28152 39 -     40656 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8116 39 +     20796 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13234 39 -     17524 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28957 39 -     34525 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12737 39 -     25376 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365324 39 -  39242232 TATC----ACACGTT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271051 39 +  21565898 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33419 39 -     45857 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28320 39 -     32606 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4482 39 +      8499 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26878 39 +     70610 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23839 39 +     36323 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13769 37 -     19938 TACC----ACGCACT-A-T----------C--A--CT-GA----TA--A-A--C-A-CTCATGC-ACCTA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31744 39 -     33796 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ATCTG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6258 39 -     15404 TACT----GAACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ATCTG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10007 39 -     32913 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20420 39 -     40346 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20675 39 +    216457 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20464 39 +     39636 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239857 27 -   2543920 TACC----ATGCATT-A-T----------A--G--AT-GA----TA--G-TTCT-A--------------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            141 25 +      1057 --------------------------------A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Chiropotes_albinasus.k141_2628359                      N 0 C 0
s Chiropotes_israelita.k141_313004                           43530 39 -    112038 CAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9081 39 +     34062 CAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344740 39 +  18827391 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11282 39 -     44032 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306065 39 - 135778131 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                   18 39 +     10270 TACT----ATGCATT-A-A----------A--A--CT-GA----TA--T-TTCC-A-TGGGTGG-TTCCA
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 I 3
s Choloepus_hoffmanni.KN194906.1                            607494 39 -    839153 TACT----GCGCATT-A-A----------A--A--CT-GA----TA--T-TTCC-A-TGGGTGG-TTCCA
i Choloepus_hoffmanni.KN194906.1                         C 0 I 3
s Chrysochloris_asiatica.ChrAsi_scaffold_2215791               168 43 -       558 TACTATATGTACATT-A-T----------A--A--CT-GA----TG--G-TTCC-A-TGATTAG-ACCTA
i Chrysochloris_asiatica.ChrAsi_scaffold_2215791         C 0 C 0
s Colobus_angolensis.KN981557.1                             410471 39 -   2368649 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380352 39 - 200372422 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3909 39 -     84244 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3888 39 -      8242 TAGT----ACAC-AT-TAT----------A--A--TG-GA----TA--T-TTCC-A-TGATAGG-ACCTG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 45969 39 -     83289 TATC----ATACTTT-A-T----------A--A--CG-GT----TA--G-TTCC-A-CAACTAA-ACATG
i Cricetomys_gambianus.CriGam_scaffold_14425             I 670 C 0
s Cricetulus_griseus.LT883664.1                          213117649 39 - 224834208 TACC----ATACTTT-A-T----------A--A--TG-GC----TA--G-TTCC-A-TAACTTA-ACCTT
i Cricetulus_griseus.LT883664.1                          I 1722 I 1
s Crocidura_indochinensis.CroInd_scaffold_77846              10911 39 +     12657 AAAT----AT---GT-ACT----------AGAA--CT-TA----TA--G-TTCC-A-GGATTTA-ACCTA
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5476 37 +     87169 CTGT------AC-AT-CAT----------A--A--TT-GA----TA--G-TTCC-A-CGACTCA-ACCCA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646513 39 -   1526836 TACC----AGACATA-C-T----------A--T--AT-GA----GT--G-TTCC-A-CCATTGG-CCACA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19707 27 +     50838 TACT----GTGCATT-A-T----------A--A--AT-GA----TA--G-TTCC-A--------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5437 27 +     36344 TACG----ATGCATT-A-T----------A--A--AT-GA----TA--G-TTCC-A--------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29221 27 +     75252 TACC----ATGCATT-A-T----------A--A--AT-GA----TA--G-TTCC-A--------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111120 39 -   2246927 TACT----GCACACT-A-T----------C--A--CT-GA----TAGAA-A--C-A-CCCATGC-ACCTA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293666 39 +  12879189 TACT----GTACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATCAG-ACCTG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633036 39 -  35494412 TAGT----ATAC-CT-TGT----------A--A--CT-GA----TA--G-TTTC-A-CCATTGG-ACCCA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866400 39 -  20541912 TGGT----ACAC-AT-TTT----------A--A--CC-GA----TA--T-TTCC-A-TAATTGA-ATCTG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665585 38 -   1390856 TAGT----ATAC-AT-TGT----------A--A--TT-GA----TA--G-TTCC-A-TGATTG--ATCTG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140383 39 -    198055 TAGT----ATAC-AT-TGT----------A--A--TT-GA----TA--G-TTCC-A-TGATTGG-ATCTG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99936 27 -    115145 TACC----GTGCGTT-A-T----------A--G--AT-GA----TA--G-TTCT-A--------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951675 40 -  37912305 TACT----ATAAATT-A-T----------A--ATACA-GA----CA--G-TAC--G-TGATTGG-ACCTG
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6606 41 -     10735 TACT----ATAAATT-A-T----------A--ATACA-GA----CA--G-TACT-G-TGATTGG-ACCTG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856626 43 - 111700974 tattatatatatgct-a-T----------A--A--TT-GA----TA--G-TTCT-A-TGAGTGG-ACCTA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7379 37 +     19438 GAGT----ACAC-AT-TAT----------A--A--C---A----TA--T-TTCC-A-TGATTGG-ATCTG
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       240859 38 -    607251 TGGT----ATAC-AT-TAT----------A--G--AT-GA----TA--G-TT-C-A-CGATTGG-ACCCA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 362
s Elephantulus_edwardii.JH947257.1                         1226864 27 +  10337057 ------------------C----------A--A--CT-GA----AA--A-TTCC-A-TGATTCA-ACCGA
i Elephantulus_edwardii.JH947257.1                       I 7 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33499 39 +    110024 TACC----ATGCTTT-A-T----------A--A--TG-GC----TA--G-TTCC-A-CTGTTGG-ACCTG
i Ellobius_lutescens.LOEQ01008920.1                      I 1241 C 0
s Ellobius_talpinus.LOJH01026522.1                           15497 39 +     18970 TACC----ATACTTT-A-T----------A--A--TG-GC----TA--G-TTCC-A-CTATTGG-ACCTG
i Ellobius_talpinus.LOJH01026522.1                       I 1271 C 0
s Enhydra_lutris.KZ291758.1                               24917237 25 +  41312741 ---------------------------------------ATTGATA--G-TTCC-A-TGATTCA-ACCCA
i Enhydra_lutris.KZ291758.1                              I 14 C 0
s Eptesicus_fuscus.JH977646.1                             12579987 39 +  14770903 TGGT----AAAC-AT-TAT----------A--A--CT-GA----TA--T-TTCC-C-TGATTGG-ACCTG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042512 39 -   4378816 TCGT----ATGC-AT-TAG----------A--A--AT-GA----TA--G-TTCC-G-TGATTGG-ACCTG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376450 39 +  39960074 TCGT----ATGA-AT-TAG----------A--A--AT-GA----TA--G-TTCC-G-TGATTGG-ACCTG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412432 39 -    498745 TCGT----ATGA-AT-TAG----------A--A--AT-GA----TA--G-TTCC-G-TGATTGG-ACCTG
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667106 40 +   7059049 AGAT----AT-G-GC-ATT----------AGAA--CC-GA----TA--G-TTTT-A-TAATTAG-GTCTG
i Erinaceus_europaeus.JH835339.1                         I 5 C 0
s Erythrocebus_patas.Contig38                               264276 39 +  21539334 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72242 39 -    133382 TAGT----ATAC-CT-TGT----------A--A--CT-GA----TG--G-TTCC-A-CCATTGG-ACCCA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257977              828 39 -      1072 TAGT----ATAC-CT-TGT----------A--A--CT-GA----TA--G-TTCC-A-CCATTGG-ACCCA
i Eubalaena_japonica.EubJap_flattened_line_257977        C 0 n 0
s Eulemur_albifrons.k141_51491                               15885 39 -     24895 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43595 39 -     70999 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87565 39 +    112731 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44128 39 +     68309 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54452 39 -     65740 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25085 39 -     75513 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49279 39 -     97555 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6003 39 +     30972 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43723 39 -     52037 TACT----GTACATT-A-G----------A--A--CA-AA----GA--G-TTCC-A-TGATTGG-ACCTG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60126 39 -    111500 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247937 39 - 206538554 CTGT----ATGC-AT-CAT----------A--A--TT-GA----AA--G-TTCA-G-TGATTGA-ACCTA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117723 39 - 205367284 CTGT----ATGC-AT-CAT----------A--A--TT-GA----AA--G-TTCA-G-TGATTGA-ACCTA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28820 39 -     30238 CTGT----ATGC-AT-CAT----------A--A--TT-GA----AA--G-TTCA-G-TGATTCA-ACCTA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923075 27 -   3816255 TACT----GCACATT-A-T----------A--A--AT-GA----TA--G-TTCC-A--------------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126716 39 -    137831 TACC----ACATATT-A-G----------A--A--CA-AA----TA--G-CTCC-A-TGATTGG-ACCTG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10261 39 +     22493 TACC----ACATATT-A-G----------A--A--CA-AA----TA--G-CTCC-A-TGATTGG-ACCTG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22331 39 -     32986 TACC----ATATATT-A-G----------A--A--CA-AA----TA--G-CTCC-A-TGATTGG-ACCTG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2270 40 -     28519 TATG----ACACATT-G-T----------A--A--CT-GA----TA--G-TTCCAA-TGATTGG-ACCCG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92566 38 -     95226 TGGT----ATAC-AT-TAT----------A--G--CT-GA----TA--G-TT-C-A-CGACTGG-ACCCA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 375
s Glis_glis.GliGli_scaffold_163929                            2410 39 -      6791 TACC----ATACATT-A-T----------A--A--CT-AA----TG--C-TTCC-A-TAATTGG-ACTTG
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6900 39 -      8343 TATC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255907 39 - 186649187 TATC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3478 39 -     78134 TACC----ATACATT-A-T----------A--A--TT-AA----TA--G-TTGC-A-TAATTGG-ACCTG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15810 39 -     40692 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37212 26 +     49394 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC----------------
i Hapalemur_gilberti.k141_646465                         C 0 I 10
s Hapalemur_griseus.k141_763500                              62080 39 -     66874 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10954 26 -     42923 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC----------------
i Hapalemur_meridionalis.k141_258450                     C 0 I 10
s Hapalemur_occidentalis.k141_578367                         17953 39 -     53142 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31910 37 -    327341 CTGT------AC-AT-CAT----------A--A--TT-GA----TA--G-TTCC-A-TGATTCA-ACCCA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10241 37 +     48891 TGGT----CTAC-AT-TAT----------A--C--C--AT----CA--G-TT-C-A-CGATTGG-ACCCA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 374
s Heterocephalus_glaber.JH602082.1                         1933494 27 -  22651954 TACC----TCACATT-A-T----------A--A--AT-GA----TA--G-TTCC-A--------------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1345 35 +      8654 C--------TATGTT-A-T----------A--G--CT-GA----TG--G-GTCC-A-TGATTGA-ACCCA
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8746 39 -     36432 TAGT----ATAC-AT-TAT----------A--A--CT-GA----TA--G-TTCC-A-CAATTGG-ACCCA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552727 39 -   1711038 TAGT----ATAC-AT-TAT----------A--A--CT-GA----TA--T-TTTC-A-TGATTAG-ACCTG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2166 38 -      2730 TAGT----ATAC-AT-TAT----------A--A--CT-GA----TA--T-TT-C-A-TGATTAG-ACCTG
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143907 39 -    630532 TATC----ACACATT-A-T----------A--A--TG-GA----TG--G-CTTT-C-TGATAGG-ACTTG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71292 21 +     83186 CTGT----ATAC-AT-CAT----------A--A--CT-GA----TG------------------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 14
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72925 27 +    143317 TATC----ATGCAT-TA-T----------A--A--AT-GA----TA--G-TTAC-A--------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6952 39 +     12352 TATC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACAGG-ACCTG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14136 39 +     55766 TATC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACAGG-ACCTG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053736 39 + 191637585 TATC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACAGG-ACCTG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802614 39 +  11177569 TATC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACAGG-ACCTG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8247 27 -    135385 TACC----ATGTGTT-G-T----------A--A--AT-GG----TA--G-TTCC-A--------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387951 21 +   7955117 TACC----ATACATT-A-T----------A--A--CT-GA----TA------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 16
s Indri_indri.k141_2415743                                    3514 39 +     11955 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-G-TGATTGG-ACCTG
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11137 39 -     16823 TAGT----ATAC-CT-TGT----------A--A--CT-GA----TA--G-TTCC-A-CCATTGG-ACCCA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241168 39 +   9596543 TACT----GCACATT-G-G----------A--A--AG-GT----GA--G-TTCC-A-CAACTGG-ATCTG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 72977 39 -     97402 TAGT----ATAC-CT-TGT----------A--A--CT-GA----TA--G-TTCC-A-CCATTGG-ACCCA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44356 39 +    110728 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    33552 39 -     49555 TGGT----AAAC-AT-TAT----------A--A--CT-GA----TA--T-Ttcc-a-tgactgg-acctg
i Lasiurus_borealis.LasBor_scaffold_26245                C 0 I 60
s Lemur_catta.scaffold_24                                 14760607 39 +  30322482 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5263 39 -     13097 TACC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTT-TC-TGATTGG-ACCTG
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5017 39 +      5940 TACC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTT-TC-TGATTGG-ACCTG
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4840 39 -      5717 TACC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTT-TC-TGATTGG-ACCTG
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11226 39 -     11567 TAGC----ACACATT-A-T----------A--G--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12607 39 -     12945 TAGC----ACACATT-A-T----------A--G--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10119 39 +     29618 TAGT----GCATGTT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10115 39 +     31569 TAGT----GCATGTT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10125 39 +     24756 TAGT----GCATGTT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10125 39 +     16388 TAGT----GCATGTT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814631 21 -   3914936 ---------------------------------------A----TA--G-TTCC-A-TGATTCA-ACCCA
i Leptonychotes_weddellii.KB714746.1                     I 14 C 0
s Lipotes_vexillifer.KE559953.1                             342322 39 +    662738 TAGT----ATAC-CT-TGT----------A--A--CT-GA----TA--G-TTCC-A-CCATTGG-ACCCA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335271 39 -   1826925 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12414 39 +     19643 TACC----GCACATT-A-G----------A--A--CA-AA----TA--G-CTCC-A-TGATTGG-ACCTG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046084 39 -   6120653 TACC----GCACATT-A-G----------A--A--CA-AA----TA--G-CTCC-A-TGATTGG-ACCTG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086011 39 +  43346337 TACT----GTACACT-A-T----------A--A--CT-GA----TA--G-ATCC-G-CGATTGG-ATCCA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615691  6 +  59628241 ---------------------------------------------------------------A-ACCCA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46660 39 -     61512 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374322 39 -  60120075 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26590 39 +     30207 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1428 39 -      5035 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26543 39 +     30527 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37719 39 -     50087 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47463 39 +     51645 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416666 39 - 187317192 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400896 39 +  25927173 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50068 39 -     62418 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2599 39 +     14901 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46540 39 +     59329 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272448 39 +    668171 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1086 39 -      5049 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4246 39 +     17132 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224355 39 -    270270 GAGT----ACCC-AT-TAC----------A--A--CT-GA----TA--T-TTCC-A-TGATTGG-ACCTG
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323736 39 +  24302211 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358567 39 -    752769 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674666 27 -    737560 CAGT----CCAC-AT-CAT----------A--A--CT-GA----TA--G-TTCC-A--------------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221966 27 +    317179 CAGT----CTAC-AT-CAT----------A--A--CT-GA----TA--G-TTCC-A--------------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502165 21 +  40650429 TACC----ATACATT-A-T----------A--A--CT-GG----TA------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 16
s Megaderma_lyra.MegLyr_scaffold_4542                       151509 39 +    207569 TAAT----ATAC-AT-TAT----------A--A--TT-GA----TA--T-TTTT-G-TGATTGG-ACCTG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27352 25 -     74585 ---------------------------------------ATTGATA--T-TTCC-A-TGAATCG-ACCCA
i Mellivora_capensis.MelCap_flattened_line_19308         I 14 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 51934 20 -    140813 --------------------------------------------TA--G-TTCC-A-CAACAGG-ACCTG
i Meriones_unguiculatus.MerUng_scaffold_7390             I 694 C 0
s Mesocricetus_auratus.KB708134.1                         17431624 39 +  29670104 TGCC----ATACTTT-T-T----------A--A--CG-GC----TA--G-TTCC-A-CAACTGA-AACTG
i Mesocricetus_auratus.KB708134.1                        I 1313 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88606 39 +     93471 TAGT----ATAC-CT-TGT----------A--A--CT-GA----TA--G-TTCC-A-CCATTGG-ACCCA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11388 39 +     17804 TAGC----ACCCATT-A-T----------A--A--TG-GA----TG--G-TTT-TC-TGACTGG-ACCTG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11888 39 -     12984 TAGC----ACCCATT-A-T----------A--A--TG-GA----TG--G-TTT-TC-TGACTGG-ACCTG
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20204 39 -     26561 TAGC----ACCCATT-A-T----------A--A--TG-GA----TG--G-TTT-TC-TGACTGG-ACCTG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985957 39 +  93316391 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47799 43 +    145209 TGTTACCTATATGCT-A-T----------A--A--AT-GA----GA--G-TCCC-A-GGAGTGG-ATCGA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186194 39 +    200668 TGGT----ACCT-GT-TTT----------A--A--CT-GA----TA--T-TTCC-A-TGATTGA-ATCTG
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15964949 38 +  27267610 TACC----ATACTCT-A-T----------A--A--TG-GC----TA--C-TT-C-A-CAATTGG-ACCTG
i Microtus_ochrogaster.CM001695.1                        I 1219 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364343 39 -   8254450 TGGT----AAAC-AT-TAT----------C--A--CT-CA----TA--T-TTCC-A-TGATTGG-ACCTG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43250 39 -     48117 TGGT----AAAC-AT-TAT----------C--A--CT-CA----TA--T-TTCC-A-TGATTGG-ACCTG
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23771 39 -     27822 TATC----ACACATT-A-C----------G--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9642 21 +     27589 ---------------------------------------A----TA--G-TTCC-A-TGATTCA-ACCCA
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 14 C 0
s Mirza_zaza.k141_766280                                     53739 39 -     62432 TACT----GCGCATT-A-G----------A--A--CC-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360711 39 +    437263 TAGT----ATAC-CT-TGT----------A--A--CT-GA----TA--G-TTTC-A-TCATTGG-ACCCA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180427 39 +    366855 TGGT----GCAC-AT-TAT----------A--A--CT-GA----TA--T-TTCC-A-TGATTGG-ATCTG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  26686 38 -     82753 TGGT----ATAC-CT-CAT----------A--G--CT-GA----GA--G-TT-C-A-TGATCAG-AGCTA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 371
s Mungos_mungo.MunMun_flattened_line_18455                   19643 37 -     63510 CTGT------AC-CT-CAT----------A--A--TT-GA----TA--G-TTCC-A-TGATTCA-ACCCA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40271 39 +     47283 TGGT----AAAC-AT-TAT----------A--A--CT-GA----TA--T-TTCC-A-TGATTGG-ACCTG
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596118 39 + 120012414 TACT----ATACTTA-T-T----------A--A--TC-GC----TA--G-TTCC-A-CAAGTGG-ACGTT
i Mus_caroli.LT608237.1                                  I 772 C 0
s Mus_musculus.chr8                                       41689315 39 + 129401213 TACT----ATACTTA-T-T----------A--A--TG-GC----TA--G-TTCC-A-CAAGTGG-ACCTT
i Mus_musculus.chr8                                      I 743 C 0
s Mus_pahari.LT608297.1                                   58217657 39 +  89631738 TACC----ATACTTA-T-T----------A--A--TG-GC----TA--G-TTCC-A-CAAGTGG-ACCTT
i Mus_pahari.LT608297.1                                  I 721 C 0
s Mus_spretus.CM004101.1                                  39498600 39 + 130317789 TACT----ATACTTA-T-T----------A--A--TG-GC----TA--G-TTCC-A-CAAGTGG-ACCTT
i Mus_spretus.CM004101.1                                 I 734 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85317 39 -     86153 TCCC----ATATATT-A-T----------A--A--CT-AA----TA--G-TTCC-A-TAATTTG-ACTTG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356258 25 +  14710649 ---------------------------------------ATTGATA--G-TTCC-A-TGATTCA-ACCCA
i Mustela_putorius.JH418006.1                            I 14 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64222 27 +     67721 TACC----GCGCATT-A-T----------A--A--AT-GA----TA--G-TTCC-A--------------
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794551 39 +  10118263 TGGT----GAAC-AT-TAT----------A--A--CT-GA----TA--T-TTCC-A-TGATTAG-ACCTG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388725 39 +   6019432 TGGT----GAAC-AT-TAT----------A--A--CT-GA----TA--T-TTCC-A-TGATTAG-ACCTG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384751 39 +   4330536 TGGT----GAAC-AT-TAT----------A--A--CT-GA----TA--T-TTCC-A-TGATTAG-ACCTG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3545 39 +     18357 TGGT----GAAC-AT-TAT----------A--A--CT-GA----TA--T-TTCC-A-TGATTAG-ACCTG
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120893 39 +    130748 TACT----ATATAAT-A-T----------A--A--TT-GA----CA--T-TTCC-A-TGGGTGG-TTCCA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 3
s Nannospalax_galili.KL204047.1                             947825 39 +   3037898 TATC----ACACATT-A-T----------A--A--TG-AA----TA--G-TCCC-A-CAATTAC-ACAAG
i Nannospalax_galili.KL204047.1                          C 0 I 5
s Nasalis_larvatus.k141_1350636                              30428 39 +     34575 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233377 39 -   7148211 TAGT----ATAC-CT-TGT----------A--A--CT-GA----TA--G-TTTC-A-CCATTGG-ACCCA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129040 39 -    149072 TGGT----ACAC-AT-TAT----------A--A--CG-GA----CG--T-TTTC-T-TGATTGG-ATCTG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 6
s Nomascus_annamensis.k141_1771965                           54838 39 -    132029 TATC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10933 39 -     16345 TATC----ACACATT-A-T----------A--A--TA-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16818 39 +     22201 TATC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415039 39 -  22158432 TATC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27216 39 -     54323 TATC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199287  6 +   9404916 ---------------------------------------------------------------A-ACCCA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639311 39 + 196305487 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-CTCC-A-TGACTGG-ACCTG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1914 39 -      9413 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-CTCC-A-TGACTGG-ACCTG
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566694 39 - 199412804 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-CTCC-A-TGACTGG-ACCTG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2557998 35 -   3988456 TAA-----ACAC----A-T----------A--A--CA-GA----GA--G-TTCC-T-TAATTGG-ATCTA
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Octodon_degus.JH651603.1                                11056313 27 -  11899542 TACC----ATGCATT-A-T----------A--A--AT-GA----TA--G-TTCC-A--------------
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453061 21 +   2017862 ---------------------------------------A----TA--G-TTCC-A-TGATTCA-ACCCA
i Odobenus_rosmarus.KB229312.1                           I 14 C 0
s Odocoileus_virginianus.KZ100018.1                         437455 38 -    630418 TGGT----ATAC-AT-TAT----------A--G--CT-GA----TA--G-TT-C-A-CAGTTGG-ACCCA
i Odocoileus_virginianus.KZ100018.1                      C 0 I 374
s Okapia_johnstoni.LVCL01S0005463.1                          15650 38 +    150152 TGGT----ATAC-AT-TAT----------A--G--CT-GA----TA--G-TT-C-A-TGATTGG-ACCCA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 373
s Ondatra_zibethicus.OndZib_scaffold_7387                    95621 39 -    140218 TACC----ATACTTT-A-T----------A--A--GG-GC----TA--G-TTCC-A-CAATTGG-ACCTG
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1581 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6164 39 -     41509 TACC----ATACGTT-A-T----------A--A--TG-GC----CA--G-GCCC-A-CAACTGG-ACCTG
i Onychomys_torridus.OnyTor_scaffold_28377               I 1695 C 0
s Orcinus_orca.KB316932.1                                  8103779 39 +  10937097 tttt----atac-ct-tGT----------A--A--CT-GA----TA--G-TTTC-A-CCATTGG-ACCCA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                788 35 +     11607 --------CTACATT-A-T----------A--A--CC-GA----CA--G-TTCC-A-TGACTGG-ATCTA
i Orycteropus_afer.OryAfe_flattened_line_201229          I 2 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40330  6 +    559221 ---------------------------------------------------------------A-ACCCA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41863 39 -     51505 TACC----ACATATT-A-G----------A--A--CA-AA----TA--G-CTCC-A-CGATTGG-ACCTG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354867 39 +   1103335 TACC----ACATATT-A-G----------A--A--CA-AA----TA--G-CTCC-A-TGATTGG-ACCTG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405361 37 -  44047080 TGGT----ATAC-AT-TAT----------A--C--C--AT----CA--G-TT-C-A-CGATTGG-ACCCA
i Ovis_aries.CM001607.2                                  C 0 I 374
s Ovis_canadensis.OviCan_scaffold_67953                       5880 37 +     17875 TGGT----ATAC-AT-TAT----------A--C--C--AT----CC--G-TT-C-A-CGATTGG-ACCCA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 374
s Pan_troglodytes.NBAG03003091.1                             13619 41 -     26668 TATC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-CTTGATAGGCACCTG
i Pan_troglodytes.NBAG03003091.1                         I 155 I 17
s Panthera_onca.PanOnc_flattened_line_3271                   25643 39 -    230217 CTGT----ATGC-AT-CAT----------A--A--CT-GA----AA--G-TTCA-G-TAATTCA-ATCTA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18462969 39 -  18783137 CTGT----ATGC-AT-CAT----------A--A--CT-GA----AA--G-TTCA-G-TAATTCA-ACCTA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973628 39 +   8748460 CTGT----ATGC-AT-CAT----------A--A--CT-GA----AA--G-TTCA-G-TGATTCA-ACCTA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1616886 38 +   2937107 TGGT----ATAT-AT-TAT----------A--G--CT-GA----TA--G-TT-C-A-CGATTGG-ACCCA
i Pantholops_hodgsonii.KE114653.1                        C 0 I 373
s Papio_anubis.CM001495.2                                   244745 39 - 183742232 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11030 39 +     21308 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293773 39 -  20919399 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23678 39 -     27687 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     349 39 +     10553 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   309 39 -     10386 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16223 39 +     78924 CTGT----ATAC-AT-CAT----------A--A--CT-GA----TA--G-TTCC-C-CAGTTCA-ATCCA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28194 39 +     31479 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-CTCC-A-TGATTGG-ACCTG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20562 39 -     24908 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-CTCC-A-TGATTGG-ACCTG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3016 41 +      9367 TACT----GTAAATT-A-T----------T--ATATA-AA----CA--G-TATT-G-TGATTGG-GCCTG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249387 39 +  18517816 CACC----ATACGTT-A-T----------A--A--TG-GC----TA--G-TTCC-A-CAACTGG-ACCTG
i Peromyscus_maniculatus.KI615324.1                      I 1708 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33056 27 -     56120 TACT----GTAAACT-A-T----------A--A--AT-GA----TA--G-TTTC-A--------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5305 39 -     63832 TAGT----ATAC-CT-TGT----------A--A--CT-GA----TA--G-TTTC-A-CCATTGG-ACCCA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3859 39 +     55023 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3397 39 -     89929 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            3987 39 +     40849 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255662 39 +  14605196 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5129 39 +     22231 TGGT----AAAC-AT-TAT----------A--A--CT-TA----TA--T-TTCC-A-TGATTGG-ACCTG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65898 39 +    207309 CAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACCGG-ACCTG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          6990 39 -     25401 CAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACCGG-ACCTG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32734 39 +     58159 CAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACCGG-ACCTG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33010 39 +     63561 CAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACCGG-ACCTG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32770 39 +     51148 CAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACCGG-ACCTG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557740 39 -   4542175 CAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACCGG-ACCTG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32754 39 +     51125 CAGC----ACACATT-A-T----------A--A--TA-GA----TG--G-TTTT-C-TGACCGG-ACCTG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2322 39 +     19503 TAGT----ATAC-CT-TGT----------A--A--CT-GA----TA--G-TTCC-A-CCATTGG-ACCCA
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9172 39 +     39866 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4254 39 -      9282 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43658 39 -     87950 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44052 39 -     88961 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8750 39 -     39403 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43701 39 +     87928 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8749 39 -     60166 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15686 39 -     67232 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43602 39 -     90634 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45069 39 +     89403 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACTGG-ACCTG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179048 39 - 189387572 TATC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193865 39 -   9816681 TATC----ACACATT-A-T----------A--A--TG-GA----TG--A-TTTT-C-TGATAGG-ACCTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29007 39 +     69807 CATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46188 39 -     80239 CATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5336 35 +      7663 C--------TATGTT-A-T----------A--G--CT-GA----TG--G-GTCC-A-TGATTGA-ACTCA
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983755 39 +   4620579 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567265 39 -   2598838 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4903 39 -      7103 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5500 39 -     11706 TACT----GCACATT-A-G----------A--A--CA-AA----TA--A-TTCC-A-TGATTGG-ACCTG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9237 39 -     30655 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35551 39 +     46564 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95830 39 -     98465 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9469 39 +     35169 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39428 49 +     52041 TACC----ATACTTT-A-TAATGGCTAGTT--A--TG-GC----TA--G-TTCC-A-CAACAGG-ACCTG
i Psammomys_obesus.NESX01036366.1                        I 675 C 0
s Pteronotus_parnellii.KE847780.1                            53320 39 -     66298 TGGT----ACAC-AT-TAT----------A--A--CT-GA----TA--T-TTCC-A-TGATTGT-GTTTG
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5832 25 -     18639 ---------------------------------------ATTGATA--G-TTCC-A-TGATTCA-ACCCA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 14 C 0
s Pteropus_alecto.KB030862.1                               5841927 39 -  28871421 TAGT----ACAC-AT-TAT----------A--A--CT-GA----TA--T-Ttcc-a-tgattgg-acctg
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538442 39 -   4952924 TAGT----ACAC-AT-TAT----------A--A--CT-GA----TA--T-Ttcc-a-tgattgg-acctg
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100286 39 +  38429054 CTGT----ATGC-AT-CAT----------G--A--TT-GA----AA--G-TTCA-G-TGATTCA-ACCTA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28374 39 +     91421 TATC----ACACATT-A-C----------A--G--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154858 39 -   7812017 TATC----ACACATT-A-C----------A--G--TG-GA----TG--C-TTTT-C-TGATAGG-ACCTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9231 39 +     72585 TATC----ACACATT-A-C----------A--G--TG-GA----TG--C-TTTT-C-TGATAGG-ACCTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54369 38 +     55069 TGGT----ATAC-AT-TAT----------A--G--CT-GA----TA--G-TT-C-A-CAATTGG-ACCCA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 375
s Rhinolophus_sinicus.LVEH01000134.1                       2915892 39 +   3329780 TAGT----ATGC-AT-TAT----------A--A--CT-GA----TA--T-TTCC-A-TGATTAG-ACCTG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             2961 39 +      7119 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123576 39 + 195417433 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237803 39 -   7961872 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76426 39 -    116970 GAGT----ATAC-AT-TAT----------A--A--CT-GA----TA--T-TTCC-A-TGATTGG-ACCTG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_1429097                               5138 17 +     27962 TACC----ACGCATT-A-T----------A--A--TG---------------------------------
i Saguinus_bicolor.k141_1429097                          C 0 N 0
s Saguinus_geoffroyi.k141_3779887                             5029 39 +      6077 TACC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTT-TC-TGATTGG-ACCTG
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5122 39 +      5971 TACC----ACACATT-A-T----------A--A--TG-GA----TG--GTTTT--C-TGATTGG-ACCTG
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5040 39 +      5932 TACC----ACACATT-A-T----------A--A--TG-GA----TG--GTTTT--C-TGATTGG-ACCTG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3385 39 -      4390 TACC----ACACATT-A-T----------A--A--TG-GA----TG--GTTTT--C-TGATTGG-ACCTG
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       392822 17 - 209938924 TACC----ACGCATT-A-A----------A--A--TG---------------------------------
i Saguinus_midas.LG03                                    C 0 I 383
s Saguinus_mystax.k141_8077960                                4988 39 +      5979 TACC----ACACATT-A-T----------A--A--TG-GA----TG--GTTTT--C-TGATTGG-ACCTG
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1558 39 -     22275 TACC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTT-TC-TGATTGG-ACCTG
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9048 38 +     16473 TGGT----ATAC-AT-TAT----------A--G--CT-GA----TA--G-TT-C-A-CGTTTGG-ACCCA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 374
s Saimiri_boliviensis.NW_024100920.1                       1110154 39 + 121099817 TAGC----ACACATT-A-T----------A--A--TG-GC----TG--G-TTTT-C-TGATTGG-ACCTG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31721 39 -     47369 TAGC----ACACATT-A-T----------A--A--TG-GC----TG--G-TTTT-C-TGATTGG-ACCTG
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32107 39 -     79414 TAGC----ACACATT-A-T----------A--A--TG-GC----TG--G-TTTT-C-TGATTGG-ACCTG
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28798 39 -     34454 TAGC----ACACATT-A-T----------A--A--TG-GC----TG--G-TTTT-C-TGATTGG-ACCTG
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16199 39 -     22428 TAGC----ACACATT-A-T----------A--A--TG-GC----TG--G-TTTT-C-TGATTGG-ACCTG
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31353 39 -     47109 TAGC----ACACATT-A-T----------A--A--TG-GC----TG--G-TTTT-C-TGATTGG-ACCTG
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239402 39 +   5703754 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           8992 39 +     21866 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGATTGG-ACCTG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26715 21 +     27374 ---------------------------------------A----TG--G-TTTT-C-TGATAGG-ACCTG
i Semnopithecus_entellus.k141_158471                     I 12 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30227 21 +     58920 ---------------------------------------A----TG--G-TTTT-C-TGATAGG-ACCTG
i Semnopithecus_hypoleucos.k141_1910531                  I 12 C 0
s Semnopithecus_johnii.k141_843753                           16725 21 -     45317 ---------------------------------------A----TG--G-TTTT-C-TGATAGG-ACCTG
i Semnopithecus_johnii.k141_843753                       I 12 C 0
s Semnopithecus_priam.k141_714795                            24383 21 -     42441 ---------------------------------------A----TG--G-TTTT-C-TGATAGG-ACCTG
i Semnopithecus_priam.k141_714795                        I 12 C 0
s Semnopithecus_schistaceus.k141_1432920                     27061 21 -     29113 ---------------------------------------A----TG--G-TTTT-C-TGATAGG-ACCTG
i Semnopithecus_schistaceus.k141_1432920                 I 12 C 0
s Semnopithecus_vetulus.k141_244474                          30136 21 -     48123 ---------------------------------------A----TG--G-TTTT-C-TGATAGG-ACCTG
i Semnopithecus_vetulus.k141_244474                      I 12 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51184 39 +     77746 TACC----ATGCTCT-A-T----------A--A--TG-CC----TA--G-TTTC-A-CAGCTGG-GTCTG
i Sigmodon_hispidus.SigHis_scaffold_20193                I 1133 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865317 40 -   1910179 TAGT----AAACAGT-ATT----------A--A--CT-GA----TA--G-TTCC-A-CTATTGA-ATCTG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672398 39 +  18376816 aaat----at---gt-att----------agaa--CT-GA----CA--G-ATCA-A-GGGTTTA-ACCTG
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869529 21 +   3870691 TACC----ATACATT-A-T----------A--A--CT-GA----TA------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 16
s Spilogale_gracilis.SpiGra_flattened_line_13525              7916 25 -     97271 ---------------------------------------ATTGATA--G-TTCT-G-TGATTCA-ATCCA
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 14 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126060 37 +    196729 CTGT------AC-AT-CAT----------A--A--TT-GA----TA--G-TTCC-A-TGATTCA-ACCCA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645090 39 +  69701581 TAGA----ATAC-AT-TAT----------A--A--CT-GA----TA--G-TTCC-A-TGGTTGG-ACCCA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392304 39 +   1523678 TAGC----ACACATT-A-T----------A--A--TG-GA----TG--G-TTTT-C-TGACAGG-ACCTG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15474 39 +     22964 TGGT----AAAT-AT-TAT----------A--A--CT-AA----TA--T-TTCC-A-TGATTGG-ACCTG
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3884 39 +      5583 TACT----ATATAAT-G-T----------A--A--TT-GA----CA--T-TTCC-A-TGGGTGG-TTCCA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 3
s Tapirus_indicus.TapInd_scaffold_7432                      192773 39 +    199430 TAGT----ATAC-AT-TAT----------A--A--CT-GA----TA--G-TTCC-A-TGATTGG-ACCTG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106741 39 -    539355 TAGT----ACAC-AT-TAT----------A--A--CT-GA----TA--G-TTCC-A-TGATTGG-ACCTG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1818 39 +      9917 TACC----ATGCATT-A-T----------A--A--CG-GA----TA--G-TTTC-A-CAATTGG-ATCTG
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8616 39 +     20590 TACC----ATACATT-A-T----------A--A--CG-GA----TA--G-CTTC-A-CAATTGG-ACCTG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354554 39 - 186847797 TATC----ACACATT-A-C----------A--A--TG-GA----TG--G-TTTT-C-TGATAGG-ACCTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25212 27 -     33621 TATT----GCACACT-A-T----------A--A--AT-GA----TA--G-TTCC-A--------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20852 37 -     31044 TACT----ACACATT-A-T----------C--A--CT-GA----TA--A-A--C-A-CCCATGC-ACCTA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481319 39 -    610378 CGGT----GCAC-AT-TTT----------A--A--CT-GG----CA--T-TTCC-G-TGATTGA-ATCAG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22260 21 +     26378 ---------------------------------------A----TG--G-TTTT-C-TGATAGG-ACCTG
i Trachypithecus_auratus.k141_1189070                    I 12 C 0
s Trachypithecus_crepusculus.k141_539312                     34936 21 -     78344 ---------------------------------------A----TG--G-TTTT-C-TGATAGG-ACCTG
i Trachypithecus_crepusculus.k141_539312                 I 12 C 0
s Trachypithecus_cristatus.k141_180416                       21585 21 +     25722 ---------------------------------------A----TG--G-TTTT-C-TGATAGG-ACCTG
i Trachypithecus_cristatus.k141_180416                   I 12 C 0
s Trachypithecus_francoisi.k141_1453105                      29892 21 -     62838 ---------------------------------------A----TG--G-TTTT-C-TGATAAG-ACCTG
i Trachypithecus_francoisi.k141_1453105                  I 12 C 0
s Trachypithecus_geei.k141_1001272                           29936 21 +     46913 ---------------------------------------A----TG--G-TTTT-C-TGATAGG-ACCTG
i Trachypithecus_geei.k141_1001272                       I 12 C 0
s Trachypithecus_germaini.k141_57262                         10743 21 -     28527 ---------------------------------------A----TG--G-TTTT-C-TGATAGG-ACCTG
i Trachypithecus_germaini.k141_57262                     I 12 C 0
s Trachypithecus_hatinhensis.k141_31479                      31827 21 -     64340 ---------------------------------------A----TG--G-TTTT-C-TGATAAG-ACCTG
i Trachypithecus_hatinhensis.k141_31479                  I 12 C 0
s Trachypithecus_laotum.k141_928651                          29865 21 -     63452 ---------------------------------------A----TG--G-TTTT-C-TGATAAG-ACCTG
i Trachypithecus_laotum.k141_928651                      I 12 C 0
s Trachypithecus_leucocephalus.k141_96450                    11312 21 +     22490 ---------------------------------------A----TG--G-TTTT-C-TGATAAG-ACCTG
i Trachypithecus_leucocephalus.k141_96450                I 12 C 0
s Trachypithecus_melamera.k141_591572                         4735 21 -      6147 ---------------------------------------A----TG--G-TTTT-C-TGATAGG-ACCTG
i Trachypithecus_melamera.k141_591572                    I 12 C 0
s Trachypithecus_obscurus.k141_848057                        11648 21 -     13050 ---------------------------------------A----TG--G-TTTT-C-TGATAGG-ACCTG
i Trachypithecus_obscurus.k141_848057                    I 12 C 0
s Trachypithecus_phayrei.ctg124                             256878 21 -   6242583 ---------------------------------------A----TG--G-TTTT-C-TGATAGG-ACCTG
i Trachypithecus_phayrei.ctg124                          I 12 C 0
s Trachypithecus_pileatus.k141_2622778                        2906 21 +     19340 ---------------------------------------A----TG--G-TTTT-C-TGATAGG-ACCTG
i Trachypithecus_pileatus.k141_2622778                   I 12 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   174656 39 -    200418 TGGT----GTAC-GC-TAT----------A--G--CT-GA----TA--G-TTCC-A-CAGTTGG-ATCCA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 375
s Trichechus_manatus.JH594705.1                            6482706 39 -  10818551 TACT----GTACCTT-A-T----------A--A--CT-AA----TA--G-TTCC-A-CAATTGA-ATCCA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835540 21 -   4065304 ---------------------------------------G----TA--T-TTCC-A-CAACTGG-GCCTG
i Tupaia_chinensis.KB320699.1                            I 6 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9561 21 -     70247 ---------------------------------------G----TA--T-TTCC-A-CAACTGG-GCCTG
i Tupaia_tana.TupTan_flattened_line_394                  I 6 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366904 39 -  33153633 TAGT----ATAC-CT-TGT----------A--A--CT-GA----TA--G-TTTC-A-CCATTGG-ACCCA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4745 11 -     21056 ----------------------------------------------------------TATTAC-AACTG
i Uropsilus_gracilis.UroGra_scaffold_46687               I 7 C 0
s Ursus_maritimus.KK499267.1                                183274 21 +   5085361 ---------------------------------------A----TA--G-TTCC-A-TGATTCA-ACCCA
i Ursus_maritimus.KK499267.1                             I 15 C 0
s Varecia_rubra.k141_787544                                  26411 39 -     30710 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25318 39 -    147434 TACT----GCACATT-A-G----------A--A--CA-AA----TA--G-TTCC-A-TGATTGG-ACCTG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77452 38 +   5488506 CAGT----GTAC-AT-TAT----------T--A--CT-GG----TA--G-TTCC-A-CAATG-G-ACCCA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106053  6 -    112863 ---------------------------------------------------------------A-ACCCA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175286 21 -    224448 TACT----ATACATT-A-T----------A--A--CT-GA----TA------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 15
s Zalophus_californianus.ZalCal_flattened_line_17732         30269 21 -     86975 ---------------------------------------A----TA--G-TTCC-A-TGATTCA-ACCCA
i Zalophus_californianus.ZalCal_flattened_line_17732     I 14 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1092 39 -      1899 TACC----ACATATT-G-T----------A--A--AG-GG----AA--G-TTCC-G-CAACTGG-GTCTG
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 I 6
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19266  0 +     24238 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955  0 +    313613 C
e Rattus_norvegicus.chr16                                 37024043 457 -  90668790 I
e Oryctolagus_cuniculus.CM000791.1                       107105947  0 - 174332312 C
e Condylura_cristata.JH655891.1                           35808250  0 +  53390261 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6630 18 +     36723 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
s Acinonyx_jubatus.LLWD01001279.1                           814066 18 +   1699592 AT-C-AC-T-T-A----CTG----G-CCCA-C--A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27312 18 +     63021 AC-T-GC-T-T-A----GTA----A-TCTA-A--C
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416521 18 +  29979442 AC-T-CG-T-T-A----CCA----G-TTCA-C--A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216863 18 +    347723 AT-T-TC-T-T-A----CTA----G-TCCA-T--A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19690 22 -     61208 AC-C-AT-T-T-ACACACCA----G-CCTT-A--A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49277 18 +     53615 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1308 18 +     13857 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17859 18 -     21945 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19544 18 +     32033 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73379 18 -     84148 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45618 18 -     78289 AC-C-GC-T-T-A----CTA----G-CCTA-C--A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45057 18 +     55831 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43507 18 -     64179 AC-C-GC-T-T-A----CTA----G-CCTA-C--A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            614 18 -      3959 AC-C-GC-T-T-A----CTA----G-CCTA-C--A
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42132 18 +     45454 AC-C-GC-T-T-A----CTA----G-CCTA-C--A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47781 18 +     70886 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9954 18 +     30854 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34088 18 +     42133 AC-C-GC-T-T-A----CTA----G-CCTA-C--A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586905 18 +   2318259 AC-C-AC-T-T-A----CTA----T-TACG-T--G
i Ammotragus_lervia.NIVO01071767.1                       I 373 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178323 18 -    412891 A-TT-AC-T-C-A----CTA----G-CTCA-C--A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             51982 18 -     68529 AC-C-AC-T-T-T----CTA----G-TACA-C--A
i Antilocapra_americana.AntAmePen_scaffold_21030         I 356 C 0
s Aotus_azarae.k141_887050                                    2346 18 +     17741 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2971 18 -     15923 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673253 18 +   5030052 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3247 18 -     16391 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2806 18 -     17186 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17322 18 -     32367 AC-C-AC-T-C-A----TTA----G-CCCA-A--G
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21382 18 -     45910 AC-C-AC-T-T-A----CTT----T-CCTA-A--A
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6578 18 -     15198 A-CC-AC-T-C-A----CTA----G-CTCA-C--A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275844 18 +  21539123 AC-C-AC-T-T-A----CTG----G-CCTA-C--G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12011 18 +     48076 AC-C-AC-T-T-A----CTG----G-CCTA-C--G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7146 18 -     28759 AC-C-AC-T-T-A----CTG----G-CCTA-C--G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34701 18 +     44353 AC-C-AC-T-T-A----CTG----G-CCTA-C--G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50071 18 -     71267 AC-C-AC-T-T-A----CTG----G-CCTA-C--G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24129 18 -     33135 AC-C-AC-T-T-A----CTG----G-CCTA-C--G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7410 18 +     11645 AC-C-AT-T-T-C----CTA----A-CCTA-A--A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7418 18 -     19611 AC-C-AT-T-T-C----CTA----A-CCTA-A--A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964667 18 -  23207421 AC-C-AC-T-T-A----TTA----G-TTCA-C--A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1167 18 -     25979 AC-C-AC-T-T-A----TTA----G-TTCA-C--A
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87911 18 +    124022 AC-C-AC-T-T-A----CTA----G-TACA-T--G
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 372 C 0
s Bison_bison.KN261452.1                                     23446 18 +    288883 AC-C-AC-T-T-C----CTA----G-TACC-T--G
i Bison_bison.KN261452.1                                 I 367 C 0
s Bos_indicus.CM003047.1                                  20357836 18 +  48749331 AC-C-AC-T-T-C----CTA----G-TACC-T--G
i Bos_indicus.CM003047.1                                 I 367 C 0
s Bos_mutus.JH880303.1                                      756400 18 +   1948126 AC-C-AC-T-T-C----CTA----G-TACC-T--G
i Bos_mutus.JH880303.1                                   I 367 C 0
s Bos_taurus.CM000203.6                                   27546542 18 -  45695690 AC-C-AC-T-T-C----CTA----G-TACC-T--G
i Bos_taurus.CM000203.6                                  I 367 C 0
s Bubalus_bubalis.KI419123.1                               1531550 18 -   4408762 AC-C-AC-T-T-C----CTA----G-TACA-T--G
i Bubalus_bubalis.KI419123.1                             I 358 C 0
s Cacajao_ayresi.k141_96119                                   8938 18 +     28062 AC-C-GC-T-T-C----CTA----G-CCTA-C--A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44232 18 -     91139 AC-C-GC-T-T-C----CTA----G-CCTA-C--A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21758 18 +     95584 AC-C-GC-T-T-C----CTA----G-CCTA-C--A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21671 18 +    119600 AC-C-GC-T-T-C----CTA----G-CCTA-C--A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11326 18 +     18648 GC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10842 18 -     13885 GC-C-AC-T-T-A----CTG----G-CCCA-C--G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2928 18 -      8861 GC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455320 18 + 189096842 GC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2843 18 +      8664 GC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632156 18 +  17673402 GT-C-AC-T-T-C----CTT----G-CTCA-C--A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666443 18 +   7040546 GT-C-AC-T-T-C----CTT----G-CTCA-C--A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210101 18 +   1652518 GT-C-AC-T-T-C----CTT----G-CTCA-C--A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506428 18 +  60362399 AC-T-AT-A-T-A----CTA----G-TCCA-C--A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10064 18 -     23171 AC-T-AT-A-T-A----CTA----G-TCCA-C--A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223407 18 +   9314153 AC-T-AT-A-T-A----CTA----G-TCCA-C--A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616542 18 +  59632846 AC-T-AT-A-T-A----CTA----G-TCCA-C--A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108123 18 -  63665305 AC-T-AT-A-T-A----CTA----G-TCCA-C--A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410634 18 -  46296322 AC-C-AC-T-T-A----CTA----T-TACG-T--G
i Capra_aegagrus.CM003241.1                              I 374 C 0
s Capra_hircus.CM004588.1                                 26592908 18 +  44709034 AC-C-AC-T-T-A----CTA----T-TACG-T--G
i Capra_hircus.CM004588.1                                I 374 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    665  8 -      1607 -------------------A----G-ACTA-A--A
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271633 18 +    496798 AT-C-AC-T-T-A----CTA----G-CTTA-A--A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1448 18 +      9923 A-CC-AC-T-C-A----CTA----G-CTCA-C--G
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28814 19 -     39886 AC-T-AC-T-TAA----CTA----G-CCTA-A--A
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80732 17 -    217609 -C-C-AC-T-T-A----CTA----G-CTCA-T--G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997553  8 +  23392119 -------------------A----G-CCTA-A--A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5000995  8 +  23407841 -------------------A----G-CCTA-A--A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64074  8 -     66877 -------------------A----G-CCTA-A--A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6241 18 -     12580 GC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44299 18 +     53515 GC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374067 18 -  26074798 AC-C-AC-T-T-A----CTG----G-CCTA-C--A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9121 18 -     34880 AC-C-AC-T-T-A----CTG----G-CCTA-C--A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68217 18 -     89041 AC-C-AC-T-T-A----CTG----G-CCTA-C--A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3594 18 -      5494 AT-C-AC-T-T-A----CTA----G-CTTA-A--A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493352 18 -  27778364 AC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20185 18 +     27315 AC-C-AC-T-T-A----CTA----G-GTCA-C--A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142425 18 -   4669795 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46164 18 +     47900 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1597 18 -     14410 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          45981 18 -    148725 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28191 18 -     40656 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8155 18 +     20796 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13273 18 -     17524 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          28996 18 -     34525 AA-C-GT-T-T-A----CTA----G-CCCA-C--A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12776 18 -     25376 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365363 18 -  39242232 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271090 18 +  21565898 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33458 18 -     45857 AA-T-GT-T-T-A----CTA----G-CCTA-C--A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28359 18 -     32606 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4521 18 +      8499 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26917 18 +     70610 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23878 18 +     36323 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13806 20 -     19938 AC-TTACTT-C-C----CTA----G-CCTC-A--A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31783 18 -     33796 AC-C-AC-T-T-C----TTA----A-CCCC-A--A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6297 18 -     15404 AC-C-AC-T-T-C----TTA----A-CCCA-A--A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10046 18 -     32913 AC-C-AC-T-C-A----CTA----G-CCTA-C--A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20459 18 -     40346 AC-C-AC-T-C-A----CTA----G-CCTA-C--A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20714 18 +    216457 AC-C-AC-T-C-A----CTA----G-CCTA-C--A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20503 18 +     39636 AC-C-AC-T-C-A----CTA----G-CCTA-C--A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239884  8 -   2543920 -------------------A----G-CCTA-A--A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            166 18 +      1057 AC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43569 18 -    112038 AC-C-GC-T-T-A----CTA----G-CCTA-C--A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9120 18 +     34062 AC-C-GC-T-T-A----CTA----G-CCTA-C--A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344779 18 +  18827391 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11321 18 -     44032 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306104 18 - 135778131 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                   60 13 +     10270 --------T-T-T----CTA----G-CTGA-A--A
i Choloepus_didactylus.ChoDid_scaffold_147047            I 3 C 0
s Choloepus_hoffmanni.KN194906.1                            607536 13 -    839153 --------T-T-T----CTA----G-CTGA-a--a
i Choloepus_hoffmanni.KN194906.1                         I 3 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2215791               211 19 -       558 AT-CTGC-T-T-T----CTA----G-CCAA-A--A
i Chrysochloris_asiatica.ChrAsi_scaffold_2215791         C 0 C 0
s Colobus_angolensis.KN981557.1                             410510 18 -   2368649 AA-C-AT-T-T-A----CTA----G-CCTA-C--G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380391 18 - 200372422 AA-C-AT-T-T-A----CTA----G-CCTA-C--G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3948 18 -     84244 AA-C-AT-T-T-A----CTA----G-CCTA-C--G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3927 18 -      8242 AC-C-AC-T-T-A----CTA----G-TTCA-C--A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46008 18 -     83289 AT-C-AC-T-T-A----CTA----A-CCTA-A--A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117689 13 - 224834208 --------T-T-A----CTA----G-CCTA-A--A
i Cricetulus_griseus.LT883664.1                          I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10950 17 +     12657 A--C-AG-T-T-A----CTA----G-CCCA-C--A
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5513 18 +     87169 AC-C-AA-T-T-A----CTA----G-TCCA-C--A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646552 18 -   1526836 TC-C-AC-T-T-C----CTA----C-CTTG-A--A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19734  8 +     50838 -------------------A----G-CCTA-A--A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5464  8 +     36344 -------------------A----G-CCTA-G--A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29248  8 +     75252 -------------------A----G-CCTA-A--A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111159 20 -   2246927 AC-TTACTT-C-C----TTA----G-CCTA-A--A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293705 18 +  12879189 AC-C-AC-T-T-T----CTA----G-CCTA-A--A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633075 18 -  35494412 AC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866439 18 -  20541912 A-CC-AC-T-C-A----GTA----G-CTGA-C--A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665623 18 -   1390856 AC-C-GC-T-T-A----CTA----G-CTCA-C--A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140422 18 -    198055 AC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99963  8 -    115145 -------------------A----G-CCGG-A--A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951715 18 -  37912305 AC-C-AC-T-G-A----TAA----G-CCTA-A--A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6647 20 -     10735 AC-C-AC-T-G-A----TAA----G-CCTA-AAAA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856669 18 - 111700974 AT-CTGC-A-T-T----CTA----G-CC-A-A--A
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7416 18 +     19438 AC-C-AT-T-T-A----CTA----G-CTCA-T--A
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241259 18 -    607251 AC-C-AC-T-T-A----CTA----G-TACA-T--G
i Elaphurus_davidianus.JRFZ01104969.1                    I 362 C 0
s Elephantulus_edwardii.JH947257.1                         1226891 18 +  10337057 AT-CTAC-T-T-T-----TA----G-ATTA-A--A
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33538 18 +    110024 AC-C-GC-T-T-A----CCA----G-CCTA-A--A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15536 18 +     18970 AC-C-AT-T-T-A----CCA----G-CCTA-A--G
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917262 18 +  41312741 AC-T-CC-T-T-A----CAA----G-TCCA-T--A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580026 22 +  14770903 AC-C-AC-T-T-A----CTAGCTAG-CTCA-T--A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042551 18 -   4378816 AC-C-AC-T-T-A----CTA----A-CTCA-C--A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376489 18 +  39960074 AC-C-AC-T-T-A----CTA----A-CTCA-C--A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412471 18 -    498745 AC-C-AC-T-T-A----CTA----A-CTCA-C--A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667146 19 +   7059049 AC-C-CC-TGT-A----GAA----G-CCCA-C--A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264315 18 +  21539334 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72281 18 -    133382 AC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_257991              867 18 -      1072 AC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Eubalaena_japonica.EubJap_flattened_line_257991        I 464 N 0
s Eulemur_albifrons.k141_51491                               15924 18 -     24895 AC-C-AC-T-T-T----CTA----A-CCTA-A--A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43634 18 -     70999 AC-C-AC-T-T-T----CTA----A-CCTA-A--A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87604 18 +    112731 AC-C-AC-T-T-T----CTA----A-CCTA-A--A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44167 18 +     68309 AC-C-AC-T-T-T----CTA----A-CCTA-A--A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54491 18 -     65740 AC-C-AC-T-T-T----CTA----A-CCTA-A--A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25124 18 -     75513 AC-C-AC-T-T-T----CTA----A-CCTA-A--A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49318 18 -     97555 AC-C-AT-T-T-T----CTA----A-CCTA-A--A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6042 18 +     30972 AC-C-AC-T-T-T----CTA----A-CCTA-A--A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43762 18 -     52037 AC-C-AC-T-T-T----CTA----A-CCTA-A--A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60165 18 -    111500 AC-C-AC-T-T-T----CTA----A-CCTA-A--A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247976 18 - 206538554 AT-C-AC-T-T-A----CTG----G-CCCA-C--A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117762 18 - 205367284 AT-C-AC-T-T-A----CTG----G-CCCA-C--A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28859 18 -     30238 AT-C-AC-T-T-A----CTG----G-CCCA-C--A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923102  8 -   3816255 -------------------A----G-CCTA-A--A
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126755 18 -    137831 AC-C-AC-T-T-A----CGT----G-CCTA-A--A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10300 18 +     22493 AC-C-AC-T-T-A----CGT----G-CCTA-A--A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22370 18 -     32986 AC-C-AC-T-T-A----CTT----G-CCTA-A--A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2310 18 -     28519 AT-C-AA-T-T-T----CTA----G-CCTA-A--A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92979 18 -     95226 AC-C-AC-T-T-A----CTA----G-TACA-T--G
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 375 C 0
s Glis_glis.GliGli_scaffold_163929                            2449 18 -      6791 AC-C-AC-T-T-A----TTA----A-TCAA-A--A
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6939 18 -      8343 AC-C-AT-T-T-A----CTA----G-CCTA-C--G
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255946 18 - 186649187 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3517 18 -     78134 AC-C-AC-T-T-A----CTA----A-TCAA-A--A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15849 18 -     40692 AC-C-AC-C-T-C----CTA----A-TCTA-A--A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37248 18 +     49394 AC-C-AC-C-T-C----CTA----A-CCTA-A--A
i Hapalemur_gilberti.k141_646465                         I 10 C 0
s Hapalemur_griseus.k141_763500                              62119 18 -     66874 AC-C-AC-C-T-C----CTA----A-CCTA-A--A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         10990 18 -     42923 AC-C-AC-C-T-C----CTA----A-CATA-A--A
i Hapalemur_meridionalis.k141_258450                     I 10 C 0
s Hapalemur_occidentalis.k141_578367                         17992 18 -     53142 AT-C-AC-C-T-C----CTA----A-CCTA-A--A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31947 18 -    327341 GC-C-AC-T-T-A----CTA----G-TCCA-C--A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10652 18 +     48891 AC-C-AC-T-T-A----CTA----T-TACG-T--G
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 374 C 0
s Heterocephalus_glaber.JH602082.1                         1933521  8 -  22651954 -------------------A----G-CCTA-A--A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1380 19 +      8654 AC-CTAC-T-T-T----CCA----G-CTGA-A--G
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8785 18 -     36432 AC-T-AG-T-T-G----CTA----G-CTTA-C--A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552766 18 -   1711038 GC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2204 18 -      2730 GC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143946 18 -    630532 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71327 18 +     83186 AC-C-AC-T-T-A----CTA----G-TCTG-C--A
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 14 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72952  8 +    143317 -------------------A----G-CCTA-A--C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               6991 18 +     12352 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14175 18 +     55766 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053775 18 + 191637585 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802653 18 +  11177569 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8274  8 -    135385 -------------------A----G-CCTA-A--A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     387988 17 +   7955117 -C-T-AC-T-T-G----CTA----G-CCTA-A--A
i Ictidomys_tridecemlineatus.JH393364.1                  I 16 C 0
s Indri_indri.k141_2415743                                    3553 18 +     11955 AC-C-AT-T-T-C----CTA----A-CCTA-A--G
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11176 18 -     16823 AC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241207 22 +   9596543 AC-C-AT-T-T-ACACACTA----G-GCTT-A--T
i Jaculus_jaculus.JH725527.1                             C 0 I 5
s Kogia_breviceps.KogBre_flattened_line_3970                 73016 18 -     97402 AT-C-AC-T-T-A----CTA----G-CTCA-C--A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44395 18 +    110728 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64328 18 -     65777 AC-C-AC-T-T-A----CTA----G-CTCA-T--A
i Lasiurus_borealis.LasBor_scaffold_16567                I 64 C 0
s Lemur_catta.scaffold_24                                 14760646 18 +  30322482 AC-C-AC-C-T-C----TTA----A-CCTA-A--A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5302 18 -     13097 AC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5056 18 +      5940 AC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4879 18 -      5717 AC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11265 18 -     11567 GC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12646 18 -     12945 GC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10158 18 +     29618 AC-C-AC-T-T-C----CTA----A-CCTA-A--A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10154 18 +     31569 AC-C-AC-T-T-C----CTA----A-CCTA-A--A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10164 18 +     24756 AC-C-AC-T-T-C----CTA----A-CCTA-A--A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10164 18 +     16388 AC-C-AC-T-T-C----CTA----A-CCTA-A--A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814652 18 -   3914936 AC-T-CC-T-T-A----CTA----G-TCTA-C--A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342361 18 +    662738 AC-C-AC-T-T-A----CTA----G-TTCA-C--A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335310 18 -   1826925 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12453 18 +     19643 AC-C-AC-T-T-A----CTT----G-CCTA-A--A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046123 18 -   6120653 AC-C-AC-T-T-A----CTT----G-CCTA-A--A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086050 19 +  43346337 AT-CTAC-T-T-T----CTA----G-CCCA-T--A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615697 18 +  59628241 AC-T-AT-A-T-A----CTA----G-TCCA-C--A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46699 18 -     61512 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374361 18 -  60120075 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26629 18 +     30207 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1467 18 -      5035 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26582 18 +     30527 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37758 18 -     50087 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47502 18 +     51645 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416705 18 - 187317192 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              400935 18 +  25927173 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50107 18 -     62418 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2638 18 +     14901 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46579 18 +     59329 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272487 18 +    668171 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1125 18 -      5049 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4285 18 +     17132 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224394 18 -    270270 AC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323775 18 +  24302211 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358606 18 -    752769 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674693 15 -    737560 ------T-T-T-A----CTA----GGCCCA-T--A
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             221993 15 +    317179 ------T-T-T-A----CTA----GGCCCA-T--A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502202 17 +  40650429 -C-T-AC-T-T-G----CTA----G-CCTA-A--A
i Marmota_marmota.CZRN01000018.1                         I 16 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151548 18 +    207569 AC-C-TC-T-T-A----CTA----T-CTCA-C--A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27377 18 -     74585 AC-T-CC-T-T-A----CTA----G-CCCA-T--A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 51954 18 -    140813 AA-C-TC-T-T-T----CTA----G-CCTA-A--T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17431663 18 +  29670104 TT-T-AT-C-T-G----CTA----G-CCTA-A--A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88645 18 +     93471 AC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11427 18 +     17804 GC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11927 18 -     12984 GC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20243 18 -     26561 GC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74985996 18 +  93316391 AC-C-AC-T-T-C----CTA----A-CCCC-A--A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47842 18 +    145209 GT-CTGC-G-T-T----CTC----A-CC-A-A--A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186233 18 +    200668 A-CC-TC-T-C-A----CTA----G-CTCA-C--A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15964987 18 +  27267610 AC-C-AC-T-T-A----CTa----g-ccta-a--a
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364382 18 -   8254450 AC-C-AC-T-T-A----CTA----G-CTCA-T--A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43289 18 -     48117 AC-C-AC-T-T-A----CTA----G-CTCA-T--A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23810 18 -     27822 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9663 18 +     27589 AC-T-CC-T-T-A----CTA----G-TCTA-C--A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53778 18 -     62432 AC-C-AC-T-T-C----CTA----A-CCCA-A--A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360750 18 +    437263 AC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180466 18 +    366855 A-CC-AC-T-T-A----CTA----G-CTCA-C--A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27095 18 -     82753 AC-C-AC-T-A-A----CTA----G-TACA-T--G
i Moschus_moschiferus.MosMos_scaffold_13123              I 371 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19680 18 -     63510 AC-C-AC-T-T-A----CTA----G-TCCA-C--A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40310 18 +     47283 AA-C-AC-T-T-A----CTA----G-CTCA-T--A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596157 18 + 120012414 AC-C-AC-T-T-A----CTA----G-CATA-A--A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689354 18 + 129401213 AC-C-AC-T-T-A----CTA----G-CATA-A--A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217696 18 +  89631738 AC-C-AC-T-T-A----CTA----G-CCAA-A--A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498639 18 + 130317789 AC-C-AC-T-T-A----ATA----G-CATA-A--A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85356 18 -     86153 CC-C-AC-T-T-A----CTA----A-CTGA-A--A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356283 18 +  14710649 AC-T-CC-T-T-A----CTA----G-TCCA-T--A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64249  8 +     67721 -------------------A----G-ACTG-A--A
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794590 18 +  10118263 AC-C-AC-T-T-A----CTA----G-CTCA-T--A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388764 18 +   6019432 AC-C-AC-T-T-A----CTA----G-CTCA-T--A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384790 18 +   4330536 AC-C-AC-T-T-A----CTA----G-CTCA-T--A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3584 18 +     18357 AC-C-AC-T-T-A----CTA----G-CTCA-T--A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120935 13 +    130748 --------T-T-T----CTA----A-CCTA-A--A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 3 C 0
s Nannospalax_galili.KL204047.1                             947869  9 +   3037898 ------------------AA----G-ccta-a--a
i Nannospalax_galili.KL204047.1                          I 5 C 0
s Nasalis_larvatus.k141_1350636                              30467 18 +     34575 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233416 18 -   7148211 AC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129085 10 -    149072 -----------------CTC----C-CTCA-C--A
i Noctilio_leporinus.NocLep_scaffold_7894                I 6 C 0
s Nomascus_annamensis.k141_1771965                           54877 18 -    132029 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10972 18 -     16345 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16857 18 +     22201 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415078 18 -  22158432 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27255 18 -     54323 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199293 18 +   9404916 AC-T-AT-A-T-A----CTA----G-TCCA-C--A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639350 18 + 196305487 AC-C-AC-T-T-A----CTT----G-CCTA-A--A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1953 18 -      9413 AC-C-AC-T-T-A----CTT----G-CCTA-A--A
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566733 18 - 199412804 AC-C-AC-T-T-A----CTT----G-CCTA-A--A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558034 12 -   3988456 ----------T-A----CTG----A-CCTA-G--T
i Ochotona_princeps.JH802162.1                           I 1 I 5
s Octodon_degus.JH651603.1                                11056340  8 -  11899542 -------------------A----A-CCTA-A--A
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453082 18 +   2017862 AC-T-CC-C-T-A----CTA----G-TCCA-C--A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437867 18 -    630418 AC-C-AC-T-T-A----CTA----G-TACA-T--G
i Odocoileus_virginianus.KZ100018.1                      I 374 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16061 18 +    150152 AC-C-AC-T-T-A----CTA----G-TACA-T--G
i Okapia_johnstoni.LVCL01S0005463.1                      I 373 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95660 18 -    140218 AC-C-AC-T-T-A----CTA----G-CCTA-A--A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6203 18 -     41509 AC-C-AC-C-T-A----CTA----G-CCTA-A--A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103818 18 +  10937097 AC-C-AC-T-T-A----CTA----G-Ctca-c--a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                823 19 +     11607 AT-CTAC-T-T-T----CTA----G-CCTA-A--A
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40336 18 +    559221 AC-T-AT-A-T-A----CTA----G-TCCA-C--A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41902 18 -     51505 AC-C-AC-T-T-A----CGT----G-CCTA-A--A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354906 18 +   1103335 AC-C-AC-T-T-A----CGT----G-CCTA-A--A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405772 18 -  44047080 AC-C-AC-T-T-A----CTA----T-TACA-T--G
i Ovis_aries.CM001607.2                                  I 374 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6291 18 +     17875 AC-C-AC-T-T-A----CTA----T-TACG-T--G
i Ovis_canadensis.OviCan_scaffold_67953                  I 374 C 0
s Pan_troglodytes.CM009242.2                               1473974 18 - 189151597 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
i Pan_troglodytes.CM009242.2                             I 39 I 9
s Panthera_onca.PanOnc_flattened_line_3271                   25682 18 -    230217 AT-C-AC-T-T-A----TTG----G-CCCA-C--A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463008 18 -  18783137 AT-C-AC-T-T-A----TTG----G-CCCA-C--A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973667 18 +   8748460 AT-C-AC-T-T-A----TGG----G-CCCA-C--A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617297 18 +   2937107 AC-C-AC-T-T-A----CTA----T-TACG-T--G
i Pantholops_hodgsonii.KE114653.1                        I 373 C 0
s Papio_anubis.CM001495.2                                   244784 18 - 183742232 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11069 18 +     21308 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293812 18 -  20919399 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23717 18 -     27687 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     388 18 +     10553 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   348 18 -     10386 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16262 18 +     78924 AC-C-AC-T-T-A----TTC----A-TCCA-C--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28233 18 +     31479 AC-C-AC-T-T-A----CTT----G-CCTA-A--A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20601 18 -     24908 AC-C-AC-T-T-A----CTT----G-CCTA-A--A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3057 18 +      9367 AC-C-AC-T-G-A----GGA----A-CCGA-A--A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249426 18 +  18517816 AC-C-AC-C-T-A----CTA----G-CCTA-A--A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33083  8 -     56120 -------------------A----G-CCTA-A--A
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5344 18 -     63832 AC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3898 18 +     55023 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3436 18 -     89929 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4026 18 +     40849 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255701 18 +  14605196 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5168 18 +     22231 AC-C-AC-T-T-A----CTA----G-CTCA-T--A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65937 18 +    207309 AC-T-GT-T-T-A----CTA----G-CCTA-C--A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7029 14 -     25401 ------C-T-T-A----CTA----G-CCTA-C--A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32773 18 +     58159 AC-T-GC-T-T-A----CTA----G-CCTA-C--A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33049 18 +     63561 AC-T-GC-T-T-A----CTA----G-CCTA-C--A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32809 18 +     51148 AC-T-GC-T-T-A----CTA----G-CCTA-C--A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557779 18 -   4542175 AC-T-GC-T-T-A----CTA----G-CCTA-C--A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32793 18 +     51125 AC-T-GC-T-T-A----CTA----G-CCTA-C--A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2361 18 +     19503 AC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9211 18 +     39866 AC-C-AC-T-C-A----CTA----G-CCCA-C--A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4293 18 -      9282 AC-C-AC-T-C-A----CTA----G-CCCA-C--A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43697 18 -     87950 AC-C-AC-T-C-A----CTA----G-CCCA-C--A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44091 18 -     88961 AC-C-AC-T-C-A----CTA----G-CCCA-C--A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8789 18 -     39403 AC-C-AC-T-C-A----CTA----G-CCCA-C--A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43740 18 +     87928 AC-C-AC-T-C-A----CTA----G-CCCA-C--A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8788 18 -     60166 AC-C-AC-T-C-A----CTA----G-CCCA-C--A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15725 18 -     67232 AC-C-AC-T-C-A----CTA----G-CCCA-C--A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43641 18 -     90634 AC-C-AC-T-C-A----CTA----G-CCCA-C--A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45108 18 +     89403 AC-C-AC-T-C-A----CTA----G-CCCA-C--A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179087 18 - 189387572 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193904 18 -   9816681 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29046 18 +     69807 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46227 18 -     80239 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5371 19 +      7663 AC-CTAC-T-T-T----CCA----G-CTGA-A--G
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983794 18 +   4620579 AC-C-AC-C-T-C----CTA----A-CCTA-A--A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567304 18 -   2598838 AC-C-AT-T-T-C----CTA----A-CCTA-A--A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4942 18 -      7103 AC-C-AT-T-T-C----CTA----A-CCTA-A--A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5539 18 -     11706 AC-C-AT-T-T-C----CTA----A-CCTA-A--A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9276 18 -     30655 AC-C-AT-T-T-C----CTA----A-CCTA-A--A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35590 18 +     46564 AC-C-AT-T-T-C----CTA----A-CCTA-A--A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95869 18 -     98465 AC-C-AT-T-T-C----CTA----A-CCTA-A--A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9508 18 +     35169 AC-C-AT-T-T-C----CTA----A-CCTA-A--A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39477 18 +     52041 AA-C-TC-T-T-T----CTA----G-CCTA-A--A
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53359 18 -     66298 A-CC-AC-T-T-A----CTG----G-CTCA-C--A
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5857 18 -     18639 AC-T-CC-T-T-A----CAA----G-TCCA-T--A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841966 18 -  28871421 ac-c-ac-t-t-a----cta----g-ctca-t--a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538481 18 -   4952924 ac-c-ac-t-t-a----cta----g-ctca-t--a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100325 18 +  38429054 AT-C-AC-T-T-A----CTG----G-CCCA-C--A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28413 18 +     91421 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154897 18 -   7812017 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9270 18 +     72585 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54782 18 +     55069 AC-C-AC-T-T-A----CTA----G-TACA-T--G
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 375 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915931 18 +   3329780 GC-C-AC-T-T-A----CTA----G-CTTA-C--A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3000 18 +      7119 AA-C-AT-T-T-A----CTA----G-CCTC-C--A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123615 18 + 195417433 AA-C-AT-T-T-A----CTA----G-CCTC-C--A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237842 18 -   7961872 AA-C-AT-T-T-A----CTA----G-CCTC-C--A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76465 18 -    116970 AC-C-AC-T-T-A----CTA----G-CTTA-C--A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5068 18 +      6077 AC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5161 18 +      5971 AC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5079 18 +      5932 AC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3424 18 -      4390 AC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_mystax.k141_8077960                                5027 18 +      5979 AC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1597 18 -     22275 AC-C-AC-T-T-A----CTG----G-CCCA-C--A
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9460 18 +     16473 AC-C-AC-T-T-A----CTA----G-TACA-T--G
i Saiga_tatarica.SaiTat_scaffold_39512                   I 374 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110193 18 + 121099817 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31760 18 -     47369 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32146 18 -     79414 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28837 18 -     34454 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16238 18 -     22428 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31392 18 -     47109 AC-C-AC-T-T-A----CTA----G-CCTA-C--A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239441 18 +   5703754 AC-C-AC-T-T-A----CTG----G-CCTA-C--A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9031 18 +     21866 AC-C-AC-T-T-A----CTG----G-CCTA-C--A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26736 18 +     27374 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30248 18 +     58920 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16746 18 -     45317 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24404 18 -     42441 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27082 18 -     29113 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30157 18 -     48123 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51223 18 +     77746 AC-C-AC-A-T-A----CTA----G-ACTA-A--A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865357 18 -   1910179 AT-C-AC-T-T-A----CTA----G-CCCA-T--A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672437 17 +  18376816 A--C-AA-T-T-A----CTA----G-TCAA-C--A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869566 17 +   3870691 -C-T-AC-T-T-G----CTA----G-CCTA-A--A
i Spermophilus_dauricus.KZ294078.1                       I 16 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7941 18 -     97271 AC-T-CC-T-T-A----CTA----G-TCTA-T--A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126097 18 +    196729 AC-C-AC-T-T-A----CTA----G-TCCA-C--A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645129 17 +  69701581 -C-C-AC-T-T-A----CTA----G-CTCA-T--G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392343 18 +   1523678 AC-C-AT-T-T-A----CTA----G-CCTA-C--A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15513 18 +     22964 AC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3926 13 +      5583 --------T-T-T----CTA----A-CCTA-A--A
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 3 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192812 18 +    199430 AC-C-AC-T-T-A----CTG----G-CTCA-T--A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106780 18 -    539355 AC-C-AC-T-T-A----CTG----G-CTCA-T--A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1857 18 +      9917 AT-C-AC-T-T-A----CTA----G-CCTA-A--A
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8655 18 +     20590 AT-C-AC-T-T-A----CTA----G-CCTA-A--A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354593 18 - 186847797 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25239  8 -     33621 -------------------A----A-CTTA-A--A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20889 20 -     31044 CC-TTACTT-C-T----CTA----G-CCTA-A--A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481358 18 -    610378 A-CC-AC-T-C-A----CTG----G-CTCA-C--A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22281 18 +     26378 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34957 18 -     78344 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21606 18 +     25722 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29913 18 -     62838 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Trachypithecus_francoisi.k141_1453105                  C 0 I 68
s Trachypithecus_geei.k141_1001272                           29957 18 +     46913 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10764 18 -     28527 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31848 18 -     64340 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 68
s Trachypithecus_laotum.k141_928651                          29886 18 -     63452 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Trachypithecus_laotum.k141_928651                      C 0 I 68
s Trachypithecus_leucocephalus.k141_96450                    11333 18 +     22490 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Trachypithecus_leucocephalus.k141_96450                C 0 I 68
s Trachypithecus_melamera.k141_591572                         4756 18 -      6147 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11669 18 -     13050 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256899 18 -   6242583 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2927 18 +     19340 AA-C-AT-T-T-A----CTA----G-CCTA-C--A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175070 18 -    200418 AC-C-AC-T-T-A----TTA----G-CTCA-C--A
i Tragulus_javanicus.TraJav_scaffold_3462                I 375 C 0
s Trichechus_manatus.JH594705.1                            6482745 19 -  10818551 AT-CTAC-T-T-T----CTA----G-CTGA-A--A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835561 11 -   4065304 AC-C-TC-G-T-A----CTA---------------
i Tupaia_chinensis.KB320699.1                            C 0 I 6
s Tupaia_tana.TupTan_flattened_line_394                       9582 11 -     70247 AC-C-TC-G-T-A----CTG---------------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 6
s Tursiops_truncatus.MRVK01000835.1                       17366943 18 -  33153633 AC-C-AC-T-T-A----CTA----G-CTCA-C--A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4756 10 -     21056 AC-C-AC-T-T-A----TT----------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183295 18 +   5085361 AC-T-CG-T-T-A----CCA----G-TTCA-C--A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26450 18 -     30710 AC-C-AC-C-T-C----CTA----A-CCTA-A--A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25357 18 -    147434 AC-C-AC-C-T-C----CTA----A-CCTA-A--A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77490 18 +   5488506 GT-C-AC-T-T-C----CTT----G-CTCA-C--A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106059 18 -    112863 AC-T-AT-A-T-A----CTA----G-TCCA-C--A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175322 17 -    224448 -C-T-AC-T-T-G----CTA----G-CCTA-A--A
i Xerus_inauris.XerIna_scaffold_2302                     I 15 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30290 18 -     86975 AC-T-CC-C-T-A----CTA----G-TCCA-C--A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1137 16 -      1899 ------------ATACACTA----G-CCTGAA--A
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 6 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19266  0 +     24238 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955  0 +    313613 C
e Saguinus_midas.LG03                                       392839 383 - 209938924 I
e Rattus_norvegicus.chr16                                 37024043 457 -  90668790 I
e Oryctolagus_cuniculus.CM000791.1                       107105947  0 - 174332312 C
e Condylura_cristata.JH655891.1                           35808250  0 +  53390261 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6648  9 +     36723 T-CCTTC----------TAG
s Acinonyx_jubatus.LLWD01001279.1                           814084  9 +   1699592 G-TTCGC----------TAT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27330  8 +     63021 T-TATT-----------TCC
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416539  9 +  29979442 T-CTTCC----------TAT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216881  9 +    347723 T-CTTCC----------TAT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19712  8 -     61208 T-TCTT-----------TAT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49295  9 +     53615 T-CCTTC----------TAG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1326  9 +     13857 T-CCTTC----------TAG
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17877  9 -     21945 T-CCTTC----------TAG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19562  9 +     32033 T-CCTTC----------TAG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73397  9 -     84148 T-CCTTC----------TGT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45636  9 -     78289 T-CCTTC----------TGT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45075  9 +     55831 T-CCTTC----------TGT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43525  9 -     64179 T-CCTTC----------TGT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            632  9 -      3959 T-CCTTC----------TGT
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42150  9 +     45454 T-CCTTC----------TGT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47799  9 +     70886 T-CCTTC----------TCT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9972  9 +     30854 T-CCTTC----------TGT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34106  9 +     42133 T-CCTTC----------TGT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586923  9 +   2318259 T-TCTCT----------TGT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178341  9 -    412891 T-CCTCT----------TAT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52000  9 -     68529 C-TCTCT----------TGT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2364  9 +     17741 T-CCTTC----------TAT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2989  9 -     15923 T-CCTTC----------TAT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673271  9 +   5030052 T-CCTTC----------TAT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3265  9 -     16391 T-CCTTC----------TAT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2824  9 -     17186 T-CCTTC----------TAT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17340  8 -     32367 T-CCTT-----------AAT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21400  7 -     45910 T-CTTCT----------T--
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6596  9 -     15198 T-CCTCC----------TGT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275862  9 +  21539123 T-CCTTC----------TGT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12029  9 +     48076 T-CCTTC----------TGT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7164  9 -     28759 T-CCTTC----------TGT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34719  9 +     44353 T-CCTTC----------TGT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50089  9 -     71267 T-CCTTC----------TGT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24147  9 -     33135 T-CCTTC----------TGT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7428  9 +     11645 T-CCTCC----------TAT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7436  9 -     19611 T-CCTCC----------TAT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964685  9 -  23207421 T-CCTCC----------TAT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1185  9 -     25979 T-CCTCC----------TAT
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87929  9 +    124022 T-TCTCT----------TGT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23464  9 +    288883 T-TCTCT----------TGT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357854  9 +  48749331 T-TCTCT----------TGT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756418  9 +   1948126 T-TCTCT----------TGT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546560  9 -  45695690 T-TCTCT----------TGT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531568  9 -   4408762 T-TCTTT----------TGT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8956  9 +     28062 T-CCTTC----------TAT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44250  9 -     91139 T-CCTTC----------TAT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21776  9 +     95584 T-CCTTC----------TAT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21689  9 +    119600 T-CCTTC----------TAT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11344  9 +     18648 T-CCTTC----------TAT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10860  9 -     13885 T-CCTTC----------TAT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2946  9 -      8861 T-CCTTC----------TAT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455338  9 + 189096842 T-CCTTC----------TAT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2861  9 +      8664 T-CCTTC----------TAT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632174  9 +  17673402 T-CCTCC----------TGT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666461  9 +   7040546 T-CCTCC----------TGT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210119  9 +   1652518 T-CCTCC----------TGT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506446  9 +  60362399 T-CTTCC----------TAT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10082  9 -     23171 T-CTTCC----------TAT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223425  9 +   9314153 T-CTTCC----------TAT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616560  9 +  59632846 T-CTTCC----------TAT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108141  9 -  63665305 T-CTTcc----------tat
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410652  9 -  46296322 T-TCTCT----------TGT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592926  9 +  44709034 T-TCTCT----------TGT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    673  8 -      1607 T-CTTT-----------CAC
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271651  9 +    496798 T-CTCCC----------TAT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1466  9 +      9923 T-CCTCC----------TAT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28833  8 -     39886 T-CCTT-----------CAC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80749  9 -    217609 T-CCTCC----------TAT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997561  8 +  23392119 T-CCTT-----------CAT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001003  8 +  23407841 T-CCTT-----------CAT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64082  8 -     66877 T-CCTT-----------CAT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6259  9 -     12580 T-CCTTC----------TAT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44317  9 +     53515 T-CCTTC----------TAT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374085  9 -  26074798 T-CCTTC----------TAT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9139  9 -     34880 T-CCTTC----------TAT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68235  9 -     89041 T-CCTTC----------TAT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3612  9 -      5494 T-CTCCC----------TAT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493370  9 -  27778364 T-TCTCC----------TAG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20203  9 +     27315 T-TCTCC----------TAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142443  1 -   4669795 T-------------------
i Cercocebus_atys.KQ010504.1                             C 0 I 59
s Cercocebus_chrysogaster.k141_1522556                       46182  1 +     47900 T-------------------
i Cercocebus_chrysogaster.k141_1522556                   C 0 I 59
s Cercocebus_lunulatus.k141_2500334                           1615  1 -     14410 T-------------------
i Cercocebus_lunulatus.k141_2500334                      C 0 I 59
s Cercocebus_torquatus.k141_2159127                          45999  1 -    148725 T-------------------
i Cercocebus_torquatus.k141_2159127                      C 0 I 59
s Cercopithecus_ascanius.k141_3120866                        28209  9 -     40656 T-CCTTT----------TAG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8173  9 +     20796 T-CCTTC----------TAG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13291  9 -     17524 T-CCTTC----------TAG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29014  9 -     34525 T-CCTTC----------TAG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12794  9 -     25376 T-CCTTC----------TAG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365381  9 -  39242232 T-CCTTC----------TAG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271108  9 +  21565898 T-CCTTC----------TAG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33476  9 -     45857 T-CCTTC----------TAG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28377  9 -     32606 T-CCTTC----------TAG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4539  9 +      8499 T-CCTTC----------TAG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26935  9 +     70610 T-CCTTC----------TAG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23896  9 +     36323 T-CCTTC----------TAG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13826  9 -     19938 C-CCTCC----------CAT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31801  9 -     33796 T-CCTCC----------TAT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6315  9 -     15404 T-CCTCC----------TAT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10064  9 -     32913 T-CCTTC----------TAT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20477  9 -     40346 T-CCTTC----------TAT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20732  9 +    216457 T-CCTTC----------TAT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20521  9 +     39636 T-CCTTC----------TAT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239892  8 -   2543920 T-CCTT-----------CAT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            184  9 +      1057 T-CCTTC----------TAT
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43587  9 -    112038 T-CCTTC----------TAT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9138  9 +     34062 T-CCTTC----------TAT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344797  9 +  18827391 T-CCTTC----------TAG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11339  9 -     44032 T-CCTTC----------TAG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306122  9 - 135778131 T-CCTTC----------TAG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                   73  9 +     10270 T-CTTCC----------TCT
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607549  9 -    839153 t-cttcc----------tct
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2215791               230  6 -       558 A-T---C----------TAT
i Chrysochloris_asiatica.ChrAsi_scaffold_2215791         C 0 C 0
s Colobus_angolensis.KN981557.1                             410528  9 -   2368649 T-CCTTC----------TGG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380409  9 - 200372422 T-CCTTC----------TGG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3966  9 -     84244 T-CCTTC----------TGG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3945  7 -      8242 T-CCTCT----------T--
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46026  8 -     83289 G-TCTT-----------CCT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117702  8 - 224834208 T-TTGT-----------CCT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10967  5 +     12657 ----CCT-----------AT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5531  9 +     87169 G-CTTCC----------TAT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646570  8 -   1526836 T-CCTT-----------TAT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19742  8 +     50838 T-CCTT-----------CAT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5472  8 +     36344 T-ACTT-----------CAT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29256  8 +     75252 T-CCTT-----------CAT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111179  9 -   2246927 T-Cctgc----------tat
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293723  8 +  12879189 T--CTCC----------TAT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633093  9 -  35494412 T-CCTCC----------TAT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866457  9 -  20541912 T-CCTCC----------TAT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665641  9 -   1390856 T-TCTCC----------TAT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140440  9 -    198055 T-TCTCC----------TAG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99971  8 -    115145 T-CCTC-----------CAT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951733  8 -  37912305 T-CTTT-----------CAT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6667  8 -     10735 T-CTTT-----------CAT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856687  9 - 111700974 T-TGTCC----------TAT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7434  9 +     19438 T-CCTCC----------TAT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241277  9 -    607251 T-TCTCT----------TGT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226909  6 +  10337057 T-TC-------------CAT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33556  8 +    110024 T-TTTT-----------CCT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15554  8 +     18970 T-TTTT-----------CCT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917280  9 +  41312741 T-CTTCC----------TAT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580048  9 +  14770903 T-CATCC----------TGT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042569 10 -   4378816 T-CCTCT-T--------TAT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376507 10 +  39960074 T-CCTCT-T--------TAT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412489 10 -    498745 T-CCTCT-T--------TAT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667165  8 +   7059049 G-actac-----------tt
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264333  9 +  21539334 T-CCTTC----------TAG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72299  9 -    133382 T-CCTCC----------TAT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114                12  9 +     25849 T-CCTCC----------TAT
i Eubalaena_japonica.EubJap_flattened_line_57114         N 0 C 0
s Eulemur_albifrons.k141_51491                               15942  9 -     24895 T-CCTCC----------TAT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43652  9 -     70999 T-CCTCC----------TAT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87622  9 +    112731 T-CCTCC----------TAT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44185  9 +     68309 T-CCTCC----------TAT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54509  9 -     65740 T-CCTCC----------TAT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25142  9 -     75513 T-CCTCC----------TAT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49336  9 -     97555 T-CCTCC----------TAT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6060  9 +     30972 T-CCTCT----------TAT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43780  9 -     52037 T-CCTCC----------TAT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60183  9 -    111500 T-CCTCC----------TAT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186247994  9 - 206538554 G-TTTGC----------TAT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117780  9 - 205367284 G-TTTGC----------TAT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28877  9 -     30238 G-TTTGC----------TAT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923110  8 -   3816255 T-CCTT-----------CAT
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126773  9 -    137831 T-CTTCT----------AAC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10318  9 +     22493 T-CTTCT----------AAC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22388  9 -     32986 T-CTTCT----------AAC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2328  9 -     28519 T-CCTTC----------TAT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      92997  9 -     95226 T-TCTCT----------TGT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2467  8 -      6791 T-CCTT-----------AAG
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6957  9 -      8343 T-CCTTC----------TAG
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255964  9 - 186649187 T-CCTTC----------TAG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3535  8 -     78134 T-CCTT-----------AAG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15867  9 -     40692 T-CCTAC----------TAT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37266  9 +     49394 T-CCTAC----------TAT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62137  9 -     66874 T-CCTAC----------TAT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11008  9 -     42923 T-CCTAC----------TAT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18010  9 -     53142 T-CCTAC----------TAT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31965  9 -    327341 G-CTTCC----------TAT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10670  9 +     48891 T-TCTCT----------TGT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933529  8 -  22651954 T-ACTT-----------CAT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1399  9 +      8654 T-TCTCT----------GAT
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8803  9 -     36432 T-CCTCC----------TAT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552784  9 -   1711038 T-GCTCC----------TAT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2222  9 -      2730 T-GCTCC----------TAT
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143964  9 -    630532 T-CCTTC----------TAG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71345  9 +     83186 T-CTTCC----------TAT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72960  8 +    143317 T-CCTT-----------CAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7009  9 +     12352 T-CCTTC----------TAG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14193  9 +     55766 T-CCTTC----------TAG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053793  9 + 191637585 T-CCTTC----------TAG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802671  9 +  11177569 T-CCTTC----------TAG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8282  8 -    135385 T-CCTT-----------CAT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388005  8 +   7955117 T-CATT-----------AAA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3571  9 +     11955 T-CCTCC----------TAT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11194  9 -     16823 T-CCTCC----------TAT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241234  2 +   9596543 ------------------AT
i Jaculus_jaculus.JH725527.1                             I 5 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73034  9 -     97402 T-CCTCC----------TAT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44413  9 +    110728 T-CCTTC----------TGT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64346  9 -     65777 T-CAAGC----------TAT
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760664  9 +  30322482 T-CCTAC----------TAT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5320  9 -     13097 T-CCTTC----------TAT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5074  9 +      5940 T-CCTTC----------TAT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4897  9 -      5717 T-CCTTC----------TAT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11283  9 -     11567 T-CCTTC----------TAT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12664  9 -     12945 T-CCTTC----------TAT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10176  9 +     29618 T-CCTCC----------TAT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10172  9 +     31569 T-CCTCC----------TAT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10182  9 +     24756 T-CCTCC----------TAT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10182  9 +     16388 T-CCTCC----------TAT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814670  9 -   3914936 T-CTTCC----------TAT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342379  9 +    662738 T-CCTCC----------TAT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335328  1 -   1826925 T-------------------
i Lophocebus_aterrimus.ctg367                            C 0 I 59
s Loris_lydekkerianus.k141_2031736                           12471 10 +     19643 T-CTTCT-T--------AAC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046141 10 -   6120653 T-CTTCT-T--------AAC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086069  9 +  43346337 T-TCTTC----------AAT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615715  9 +  59628241 T-CTTCC----------TAT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46717  1 -     61512 T-------------------
i Macaca_arctoides.k141_1757516                          C 0 I 59
s Macaca_assamensis.Contig5                                 374379  1 -  60120075 T-------------------
i Macaca_assamensis.Contig5                              C 0 I 59
s Macaca_cyclopis.k119_263443                                26647  1 +     30207 T-------------------
i Macaca_cyclopis.k119_263443                            C 0 I 59
s Macaca_fascicularis.k141_1617581                            1485  1 -      5035 T-------------------
i Macaca_fascicularis.k141_1617581                       C 0 I 59
s Macaca_fuscata.k119_546792                                 26600  1 +     30527 T-------------------
i Macaca_fuscata.k119_546792                             C 0 I 59
s Macaca_leonina.k141_321385                                 37776  1 -     50087 T-------------------
i Macaca_leonina.k141_321385                             C 0 I 59
s Macaca_maura.k141_1103459                                  47520  1 +     51645 T-------------------
i Macaca_maura.k141_1103459                              C 0 I 59
s Macaca_mulatta.NC_041758.1                                416723  1 - 187317192 T-------------------
i Macaca_mulatta.NC_041758.1                             C 0 I 59
s Macaca_nemestrina.KQ007038.1                              400953  1 +  25927173 T-------------------
i Macaca_nemestrina.KQ007038.1                           C 0 I 59
s Macaca_nigra.k141_2818840                                  50125  1 -     62418 T-------------------
i Macaca_nigra.k141_2818840                              C 0 I 59
s Macaca_radiata.k141_2139468                                 2656  1 +     14901 T-------------------
i Macaca_radiata.k141_2139468                            C 0 I 59
s Macaca_siberu.k141_2185972                                 46597  1 +     59329 T-------------------
i Macaca_siberu.k141_2185972                             C 0 I 59
s Macaca_silenus.Contig273                                  272505  1 +    668171 T-------------------
i Macaca_silenus.Contig273                               C 0 I 59
s Macaca_thibetana.k99_45532                                  1143  1 -      5049 T-------------------
i Macaca_thibetana.k99_45532                             C 0 I 59
s Macaca_tonkeana.k141_339739                                 4303  1 +     17132 T-------------------
i Macaca_tonkeana.k141_339739                            C 0 I 59
s Macroglossus_sobrinus.MacSob_scaffold_4024                224412  9 -    270270 T-CGTCC----------TAT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323793  1 +  24302211 T-------------------
i Mandrillus_leucophaeus.scaffold280                     C 0 I 59
s Mandrillus_sphinx.Contig270                               358624  1 -    752769 T-------------------
i Mandrillus_sphinx.Contig270                            C 0 I 59
s Manis_javanica.JSZB01003497.1                             674708  9 -    737560 T-CCtcc----------tat
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222008  9 +    317179 T-CCTCC----------TAT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502219  8 +  40650429 T-CATT-----------AAA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151566 10 +    207569 T-CATTC-T--------TGT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27395  9 -     74585 T-CTTCC----------TAT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 51972  8 -    140813 T-TTTT-----------TCC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17431681  8 +  29670104 T-TTCT-----------CCT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88663  9 +     93471 T-CCTCC----------TAT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11445  9 +     17804 T-CCTTC----------TAT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11945  9 -     12984 T-CCTTC----------TAT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20261  9 -     26561 T-CCTTC----------TAT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986014  9 +  93316391 T-CCTCC----------TAT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47860  9 +    145209 T-TATCC----------TAT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186251  9 +    200668 T-CCTCC----------TAT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965005  8 +  27267610 t-tctt-----------tct
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364400  9 -   8254450 T-CCTCC----------TAT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43307  9 -     48117 T-CCTCC----------TAT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23828  9 -     27822 T-CCTTC----------TAG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9681  9 +     27589 T-CTTCC----------TAT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53796  9 -     62432 T-GCTCC----------TAT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360768  9 +    437263 T-CCTCC----------TAT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180484  9 +    366855 T-CTTCC----------TAT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27113  1 -     82753 -------------------T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19698  9 -     63510 G-CTTCC----------TAT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40328  9 +     47283 T-CATCT----------TGT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596175  8 + 120012414 T-TCTT-----------CTC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689372  8 + 129401213 T-TCTT-----------CTC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217714  8 +  89631738 T-TCTT-----------CCC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498657  8 + 130317789 T-TCTT-----------CTC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85374  8 -     86153 T-CTTT-----------AAG
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356301  9 +  14710649 T-CTTCC----------TAT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64257  8 +     67721 T-CCCT-----------CAC
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794608  9 +  10118263 T-CATCT----------TGT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388782  9 +   6019432 T-CATCT----------TGT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384808  9 +   4330536 T-CATTT----------TGT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3602  9 +     18357 T-CATCT----------TGT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120948  9 +    130748 T-CCTCC----------TAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947878  8 +   3037898 t-tttt-----------cat
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30485  9 +     34575 T-CCTTC----------TGG
i Nasalis_larvatus.k141_1350636                          C 0 I 68
s Neophocaena_asiaeorientalis.KZ687982.1                   1233434  9 -   7148211 T-CCTCC----------TAT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129095  9 -    149072 C-CCTCC----------TAT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54895  9 -    132029 T-CCTTC----------TAG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10990  9 -     16345 T-CCTTC----------TAG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16875  9 +     22201 T-CCTTC----------TAG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415096  9 -  22158432 T-CCTTC----------TAG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27273  9 -     54323 T-CCTTC----------TAG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199311  9 +   9404916 T-CTTCC----------TAT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639368 10 + 196305487 T-CTTCT-----C----AAC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1971 10 -      9413 T-CTTCT-----C----AAC
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566751 10 - 199412804 T-CTTCT-T--------AAC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558051 17 -   3988456 --TCTT-ATGTTCATAAAAT
i Ochotona_princeps.JH802162.1                           I 5 C 0
s Octodon_degus.JH651603.1                                11056348  7 -  11899542 T-CCTT-----------CA-
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453100  9 +   2017862 T-CTTCC----------TAT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437885  9 -    630418 T-TCTCT----------TGT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16079  9 +    150152 T-TCTCT----------TGT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95678  8 -    140218 T-TCTT-----------CCT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6221  8 -     41509 T-TCTC-----------CCT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103836  9 +  10937097 t-ttttt----------tat
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                842  9 +     11607 T-TCTCT----------TAT
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40354  9 +    559221 t-cttcc----------tat
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41920  9 -     51505 T-CTTCT----------AAC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354924  9 +   1103335 T-CTTCT----------AAC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405790  9 -  44047080 T-TCTCT----------TGT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6309  9 +     17875 T-TCTCT----------TGT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             13677 10 -     26668 TCCCTTC----------TAG
i Pan_troglodytes.NBAG03003091.1                         I 17 I 3
s Panthera_onca.PanOnc_flattened_line_3271                   25700  9 -    230217 G-TTTGC----------TAT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463026  9 -  18783137 G-TTTGC----------TAT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973685  9 +   8748460 G-TTTGC----------TAT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617315  9 +   2937107 T-TCTCT----------TGT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244802  1 - 183742232 T-------------------
i Papio_anubis.CM001495.2                                C 0 I 59
s Papio_cynocephalus.k141_1507553                            11087  1 +     21308 T-------------------
i Papio_cynocephalus.k141_1507553                        C 0 I 59
s Papio_hamadryas.Contig39                                  293830  1 -  20919399 T-------------------
i Papio_hamadryas.Contig39                               C 0 I 59
s Papio_kindae.k141_2214839                                  23735  1 -     27687 T-------------------
i Papio_kindae.k141_2214839                              C 0 I 59
s Papio_papio.k141_3538738                                     406  1 +     10553 T-------------------
i Papio_papio.k141_3538738                               C 0 I 59
s Papio_ursinus.k141_5784434                                   366  1 -     10386 T-------------------
i Papio_ursinus.k141_5784434                             C 0 I 59
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16280  9 +     78924 T-CGTCC----------TAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28251  9 +     31479 T-CTTCT----------TAC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20619  9 -     24908 T-CTTCT----------TAC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3075  8 +      9367 T-CCTT-----------CAT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249444  8 +  18517816 T-TCTT-----------CCT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33091  8 -     56120 T-ATTT-----------CAT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5362  9 -     63832 T-CCTCC----------TAT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3916  9 +     55023 T-CCTGC----------TGG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3454  9 -     89929 T-CCTGC----------TGG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4044  9 +     40849 T-CCTGC----------TGG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255719  9 +  14605196 T-CCTGC----------TGG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5186  9 +     22231 T-CATCC----------TGT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65955  9 +    207309 T-CCTTC----------TAT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7043  9 -     25401 T-CCTTC----------TAT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32791  9 +     58159 T-CCTTC----------TAT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33067  9 +     63561 T-CCTTC----------TAT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32827  9 +     51148 T-CCTTC----------TAT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557797  9 -   4542175 T-CCTTC----------TAT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32811  9 +     51125 T-CCTTC----------TAT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2379  9 +     19503 T-CCTCC----------TAT
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9229  9 +     39866 T-CCTTC----------TAT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4311  9 -      9282 T-CCTTC----------TAT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43715  9 -     87950 T-CCTTC----------TAT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44109  9 -     88961 T-CCTTC----------TAT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8807  9 -     39403 T-CCTTC----------TAT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43758  9 +     87928 T-CCTTC----------TAT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8806  9 -     60166 T-CCTTC----------TAT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15743  9 -     67232 T-CCTTC----------TAT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43659  9 -     90634 T-CCTTC----------TAT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45126  9 +     89403 T-CCTTC----------TAT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179105  9 - 189387572 T-TCTTC----------TAG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193922  9 -   9816681 T-TCTTC----------TAG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29064  9 +     69807 T-CCTTC----------TGG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46245  9 -     80239 T-CCTTC----------TGG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5390  9 +      7663 T-TCTCT----------GAT
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983812  9 +   4620579 T-CCTAC----------TAT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567322  9 -   2598838 T-CCTCC----------TAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4960  9 -      7103 T-CCTCC----------TAT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5557  9 -     11706 T-CCTCC----------TAT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9294  9 -     30655 T-CCTCC----------TAT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35608  9 +     46564 T-CCTCC----------TAT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95887  9 -     98465 T-CCTCC----------TAT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9526  9 +     35169 T-CCTCC----------TAT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39495  8 +     52041 T-TTTT-----------CCC
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53377  9 -     66298 T-CCTCC----------TGT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5875  9 -     18639 T-CTTCC----------TAT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841984  9 -  28871421 t-cctcc----------tat
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538499  9 -   4952924 t-cctcc----------tat
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100343  9 +  38429054 G-TTTGC----------TAT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28431  9 +     91421 T-CCTTC----------TGG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154915  9 -   7812017 T-CCTTC----------TGG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9288  9 +     72585 T-CCTTC----------TGG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54800  9 +     55069 T-TCTCT----------TGT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915949  9 +   3329780 T-GTTCC----------TAT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3018  9 +      7119 T-CCTTC----------TGG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123633  9 + 195417433 T-CCTTC----------TGG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237860  9 -   7961872 T-CCTTC----------TGG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76483  9 -    116970 T-CCTCC----------TAT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5086  9 +      6077 T-CCTTC----------TAT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5179  9 +      5971 T-CCTTC----------CAT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5097  9 +      5932 T-CCTTC----------CAG
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3442  9 -      4390 T-CCTTC----------CAT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_mystax.k141_8077960                                5045  9 +      5979 T-CCTTC----------CAT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1615  9 -     22275 T-CCTTC----------TAT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9478  9 +     16473 T-TCTCT----------TGT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110211  9 + 121099817 T-CCTTc----------tat
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31778  9 -     47369 T-CCTTC----------TAT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32164  9 -     79414 T-CCTTC----------TAT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28855  9 -     34454 T-CCTTC----------TAT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16256  9 -     22428 T-CCTTC----------TAT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31410  9 -     47109 T-CCTTC----------TAT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239459  9 +   5703754 T-CCTTC----------TGT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9049  9 +     21866 T-CCTTC----------TGT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26754  9 +     27374 T-CCTTC----------TGG
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30266  9 +     58920 T-CCTTC----------TGG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16764  9 -     45317 T-CCTTC----------TGG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24422  9 -     42441 T-CCTTC----------TGG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27100  9 -     29113 T-CCTTC----------TGG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30175  9 -     48123 T-CCTTC----------TGG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51241  8 +     77746 T-TTTT-----------CCT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865375  8 -   1910179 T-ACCCT-----------AT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672454  8 +  18376816 A-ATGCC-----------AT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869583  8 +   3870691 T-CATT-----------AAA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7959  9 -     97271 T-CTTCC----------TAT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126115  9 +    196729 G-CTTCC----------TAT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645146  9 +  69701581 T-CCTCC----------TAT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392361  9 +   1523678 T-CCTTC----------TAG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15531  9 +     22964 T-CCTCC----------TCT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3939  9 +      5583 T-CCTCC----------TAT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192830  9 +    199430 T-CCTCC----------TAT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106798  9 -    539355 T-CCTCC----------TGT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1875  9 +      9917 T-CTTCC----------TAT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8673  9 +     20590 T-CTTCC----------TAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354611  1 - 186847797 T-------------------
i Theropithecus_gelada.CM009954.1                        C 0 I 59
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25247  8 -     33621 T-CCTT-----------CAT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20909  9 -     31044 T-CCTCC----------TGT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481376  9 -    610378 T-CCTCC----------TAT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22299  9 +     26378 T-CCTTC----------TGG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34975  9 -     78344 T-CCTTC----------TGG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21624  9 +     25722 T-CCTTC----------TGG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      29999  9 -     62838 T-CCTTC----------TGG
i Trachypithecus_francoisi.k141_1453105                  I 68 C 0
s Trachypithecus_geei.k141_1001272                           29975  9 +     46913 T-CCTTC----------TGG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10782  9 -     28527 T-CCTTC----------TGG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31934  9 -     64340 T-CCTTC----------TGG
i Trachypithecus_hatinhensis.k141_31479                  I 68 C 0
s Trachypithecus_laotum.k141_928651                          29972  9 -     63452 T-CCTTC----------TGG
i Trachypithecus_laotum.k141_928651                      I 68 C 0
s Trachypithecus_leucocephalus.k141_96450                    11419  9 +     22490 T-CCTTC----------TGG
i Trachypithecus_leucocephalus.k141_96450                I 68 C 0
s Trachypithecus_melamera.k141_591572                         4774  9 -      6147 T-CCTTC----------TGG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11687  9 -     13050 T-CCTTC----------TGG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256917  9 -   6242583 T-CCTTC----------TGG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2945  9 +     19340 T-CCTTC----------TGG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175088  9 -    200418 T-CCTCC----------TGT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482764  9 -  10818551 T-TCTTT----------GAT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835578  9 -   4065304 T-CCTCC----------TAT
i Tupaia_chinensis.KB320699.1                            I 6 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9599  9 -     70247 T-CCTCC----------TCT
i Tupaia_tana.TupTan_flattened_line_394                  I 6 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366961  9 -  33153633 T-CCTCC----------TAT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4766  5 -     21056 ----CCT-----------AT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 4
s Ursus_maritimus.KK499267.1                                183313  9 +   5085361 T-CTTAG----------TAT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26468  9 -     30710 T-CCCCC----------TAT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25375  9 -    147434 T-CCCCC----------TAT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77508  9 +   5488506 T-CCTCC----------TGT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106077  9 -    112863 T-CTTCC----------TAT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175339  8 -    224448 T-CCTT-----------AAT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30308  9 -     86975 T-CTTCC----------TAT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1153  8 -      1899 T-CCTT-----------CAT
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19266  0 +     24238 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955  0 +    313613 C
e Saguinus_midas.LG03                                       392839 383 - 209938924 I
e Rattus_norvegicus.chr16                                 37024043 457 -  90668790 I
e Oryctolagus_cuniculus.CM000791.1                       107105947  0 - 174332312 C
e Condylura_cristata.JH655891.1                           35808250  0 +  53390261 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6657 3 +     36723 TTT
s Acinonyx_jubatus.LLWD01001279.1                           814093 3 +   1699592 TTC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27338 3 +     63021 TTT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416548 3 +  29979442 TTG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216890 3 +    347723 TTG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19720 3 -     61208 TTT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49304 3 +     53615 TTT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1335 3 +     13857 TTT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17886 3 -     21945 TTT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19571 3 +     32033 TTT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73406 3 -     84148 TTT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45645 3 -     78289 TTT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45084 3 +     55831 TTT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43534 3 -     64179 TTT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            641 3 -      3959 TTT
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42159 3 +     45454 TTT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47808 3 +     70886 TTT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9981 3 +     30854 TTT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34115 3 +     42133 TTT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586932 3 +   2318259 TTC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178350 3 -    412891 TTC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52009 3 -     68529 TTC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2373 3 +     17741 TTT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             2998 3 -     15923 TTT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673280 3 +   5030052 TTT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3274 3 -     16391 TTT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2833 3 -     17186 TTT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17348 3 -     32367 TTA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21407 1 -     45910 --C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6605 3 -     15198 TTC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275871 3 +  21539123 TTT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12038 3 +     48076 TTT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7173 3 -     28759 TTT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34728 3 +     44353 TTT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50098 3 -     71267 TTT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24156 3 -     33135 TTT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7437 3 +     11645 TTC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7445 3 -     19611 TTC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964694 3 -  23207421 TTC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1194 3 -     25979 TTC
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87938 3 +    124022 TTC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23473 3 +    288883 TTC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357863 3 +  48749331 TTC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756427 3 +   1948126 TTC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546569 3 -  45695690 TTC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531577 3 -   4408762 TTC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8965 3 +     28062 TTT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44259 3 -     91139 TTT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21785 3 +     95584 TTT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21698 3 +    119600 TTT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11353 3 +     18648 TTT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10869 3 -     13885 TTT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2955 3 -      8861 TTT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455347 3 + 189096842 TTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2870 3 +      8664 TTT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632183 3 +  17673402 TTC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666470 3 +   7040546 TTC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210128 3 +   1652518 TTC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506455 3 +  60362399 TTG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10091 3 -     23171 TTG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223434 3 +   9314153 TTG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616569 3 +  59632846 TTG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108150 3 -  63665305 ttg
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410661 3 -  46296322 TTC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592935 3 +  44709034 TTC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    681 3 -      1607 TTC
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271660 3 +    496798 TTC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1475 3 +      9923 TTC
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28841 3 -     39886 TTC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80758 3 -    217609 TTT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997569 3 +  23392119 TTC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001011 3 +  23407841 TTC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64090 3 -     66877 TTC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6268 3 -     12580 TTT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44326 3 +     53515 TTT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374094 3 -  26074798 TTT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9148 3 -     34880 TTT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68244 3 -     89041 TTT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3621 3 -      5494 TTC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493379 3 -  27778364 TTC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20212 3 +     27315 TTC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28218 3 -     40656 TTT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8182 3 +     20796 TTT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13300 3 -     17524 TTT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29023 3 -     34525 TTT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12803 3 -     25376 TTT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365390 3 -  39242232 TTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271117 3 +  21565898 TTT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33485 3 -     45857 TTT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28386 3 -     32606 TTT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4548 3 +      8499 TTT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26944 3 +     70610 TTT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23905 3 +     36323 TTT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13835 3 -     19938 TTC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31810 3 -     33796 TTC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6324 3 -     15404 TTC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10073 3 -     32913 TTT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20486 3 -     40346 TTT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20741 3 +    216457 TTT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20530 3 +     39636 TTT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239900 3 -   2543920 TTC
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            193 3 +      1057 TTT
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43596 3 -    112038 TTT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9147 3 +     34062 TTT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344806 3 +  18827391 TTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11348 3 -     44032 TTT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306131 3 - 135778131 TTT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                   82 3 +     10270 CTC
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607558 3 -    839153 ctc
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2215791               236 3 -       558 TTC
i Chrysochloris_asiatica.ChrAsi_scaffold_2215791         C 0 C 0
s Colobus_angolensis.KN981557.1                             410537 3 -   2368649 TTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380418 3 - 200372422 TTT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3975 3 -     84244 TTT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3952 1 -      8242 --T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46034 3 -     83289 TTT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117710 3 - 224834208 TTT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10972 1 +     12657 --T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5540 3 +     87169 TTC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646578 3 -   1526836 CTT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19750 3 +     50838 TTC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5480 3 +     36344 TTC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29264 3 +     75252 TTC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111188 3 -   2246927 ttc
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293731 3 +  12879189 TTC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633102 3 -  35494412 TTC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866466 3 -  20541912 TTC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665650 3 -   1390856 TTC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140449 3 -    198055 TTC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99979 3 -    115145 TTC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951741 3 -  37912305 TTG
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6675 3 -     10735 TTC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856696 3 - 111700974 TCT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7443 3 +     19438 TTC
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241286 3 -    607251 TTC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226915 3 +  10337057 TCC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33564 3 +    110024 TTT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15562 3 +     18970 TTT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917289 3 +  41312741 TTG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580057 3 +  14770903 TTC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042579 3 -   4378816 TTC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376517 3 +  39960074 TTC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412499 3 -    498745 TTC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667173 1 +   7059049 --t
i Erinaceus_europaeus.JH835339.1                         C 0 I 158
s Erythrocebus_patas.Contig38                               264342 3 +  21539334 TTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72308 3 -    133382 TTC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114                21 3 +     25849 TTC
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               15951 3 -     24895 TTC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43661 3 -     70999 TTC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87631 3 +    112731 TTC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44194 3 +     68309 TTC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54518 3 -     65740 TGC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25151 3 -     75513 TTC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49345 3 -     97555 TTC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6069 3 +     30972 TTC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43789 3 -     52037 TTC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60192 3 -    111500 TTC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248003 3 - 206538554 TTC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117789 3 - 205367284 TTC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28886 3 -     30238 TTC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923118 3 -   3816255 TTC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126782 3 -    137831 TTC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10327 3 +     22493 TTC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22397 3 -     32986 TTC
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2337 3 -     28519 TTC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93006 3 -     95226 TTC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2475 3 -      6791 TTC
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6966 3 -      8343 TTT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255973 3 - 186649187 TTT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3543 3 -     78134 TTG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15876 3 -     40692 TTT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37275 3 +     49394 TTT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62146 3 -     66874 TTT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11017 3 -     42923 TTT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18019 3 -     53142 TTT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31974 2 -    327341 -TC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10679 3 +     48891 TTC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933537 3 -  22651954 ATC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1408 3 +      8654 CCC
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8812 3 -     36432 TTC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552793 3 -   1711038 TTT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2231 3 -      2730 TTT
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143973 3 -    630532 TTT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71354 1 +     83186 T--
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72968 3 +    143317 TTC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7018 3 +     12352 TTT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14202 3 +     55766 TTT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053802 3 + 191637585 TTT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802680 3 +  11177569 TTT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8290 3 -    135385 TTC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388013 3 +   7955117 TTC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3580 3 +     11955 TTC
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11203 3 -     16823 TTC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241236 1 +   9596543 T--
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73043 3 -     97402 TTC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44422 3 +    110728 TTT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64355 3 -     65777 TTC
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760673 3 +  30322482 TTT
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5329 3 -     13097 TTT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5083 3 +      5940 TTT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4906 3 -      5717 TTT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11292 3 -     11567 TTT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12673 3 -     12945 TTT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10185 3 +     29618 TTC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10181 3 +     31569 TTC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10191 3 +     24756 TTC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10191 3 +     16388 TTC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814679 3 -   3914936 TTG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342388 3 +    662738 TTC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12481 3 +     19643 TTC
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046151 3 -   6120653 TTC
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086078 3 +  43346337 TCC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615724 3 +  59628241 TTG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224421 3 -    270270 TTC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Manis_javanica.JSZB01003497.1                             674717 3 -    737560 ttc
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222017 3 +    317179 TTC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502227 3 +  40650429 TTC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151576 3 +    207569 TTT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27404 3 -     74585 TTG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 51980 3 -    140813 TTT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17431689 3 +  29670104 TTT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88672 3 +     93471 TTC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11454 3 +     17804 TTT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11954 3 -     12984 TTT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20270 3 -     26561 TTT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986023 3 +  93316391 TTC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47869 3 +    145209 TCT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186260 3 +    200668 TTC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965013 3 +  27267610 ttt
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364409 3 -   8254450 TTC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43316 3 -     48117 TTC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23837 3 -     27822 TTT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9690 3 +     27589 TTG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53805 3 -     62432 TTC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360777 3 +    437263 TTC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180493 3 +    366855 TTC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27114 3 -     82753 TTC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19707 3 -     63510 TTC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40337 3 +     47283 TTC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596183 3 + 120012414 TTA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689380 3 + 129401213 TTA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217722 3 +  89631738 TTA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498665 3 + 130317789 TTA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85382 3 -     86153 TTC
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356310 3 +  14710649 TTG
i Mustela_putorius.JH418006.1                            C 0 I 4
s Myocastor_coypus.MyoCoy_scaffold_15261                     64265 3 +     67721 TTC
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794617 3 +  10118263 TTC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388791 3 +   6019432 TTC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384817 3 +   4330536 TTC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3611 3 +     18357 TTC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120957 3 +    130748 TTC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947886 3 +   3037898 ttt
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30562 3 +     34575 TTT
i Nasalis_larvatus.k141_1350636                          I 68 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233443 3 -   7148211 TTC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129104 3 -    149072 TTC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54904 3 -    132029 TTT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              10999 3 -     16345 TTT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16884 3 +     22201 TTT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415105 3 -  22158432 TTT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27282 3 -     54323 TTT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199320 3 +   9404916 TTG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639378 3 + 196305487 TTC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1981 3 -      9413 TTC
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566761 3 - 199412804 TTC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558068 3 -   3988456 TTC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056355 3 -  11899542 TTC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453109 3 +   2017862 TTG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437894 3 -    630418 TTC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16088 3 +    150152 TTC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95686 3 -    140218 TTT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6229 3 -     41509 TTT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103845 3 +  10937097 ttc
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229                851 3 +     11607 TCC
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40363 3 +    559221 ttg
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41929 3 -     51505 TTC
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354933 3 +   1103335 TTC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405799 3 -  44047080 TTC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6318 3 +     17875 TTC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1474001 3 - 189151597 TTT
i Pan_troglodytes.CM009242.2                             I 9 I 6
s Panthera_onca.PanOnc_flattened_line_3271                   25709 3 -    230217 TTC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463035 3 -  18783137 TTC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973694 3 +   8748460 TTC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617324 3 +   2937107 TTC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16289 3 +     78924 TTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28260 3 +     31479 TTC
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20628 3 -     24908 TTC
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3083 3 +      9367 TCC
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249452 3 +  18517816 TTT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33099 3 -     56120 TTC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5371 3 -     63832 TTC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3925 3 +     55023 TTT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3463 3 -     89929 TTT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4053 3 +     40849 TTT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255728 3 +  14605196 TTT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5195 3 +     22231 TTC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65964 3 +    207309 TTT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7052 3 -     25401 TTT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32800 3 +     58159 TTT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33076 3 +     63561 TTT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32836 3 +     51148 TTT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557806 3 -   4542175 TTT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32820 3 +     51125 TTT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2388 3 +     19503 TTC
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9238 3 +     39866 TTT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4320 3 -      9282 TTT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43724 3 -     87950 TTT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44118 3 -     88961 TTT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8816 3 -     39403 TTT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43767 3 +     87928 TTT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8815 3 -     60166 TTT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15752 3 -     67232 TTT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43668 3 -     90634 TTT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45135 3 +     89403 TTT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179114 3 - 189387572 TTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193931 3 -   9816681 TTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29073 3 +     69807 TTT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46254 3 -     80239 TTT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5399 3 +      7663 ACC
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983821 3 +   4620579 TTT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567331 3 -   2598838 TTC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4969 3 -      7103 TTC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5566 3 -     11706 TTC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9303 3 -     30655 TTC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35617 3 +     46564 TTC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95896 3 -     98465 TTC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9535 3 +     35169 TTC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39503 3 +     52041 TTT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53386 3 -     66298 CTC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5884 3 -     18639 TTG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5841993 3 -  28871421 ttc
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538508 3 -   4952924 ttc
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100352 3 +  38429054 TTT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28440 3 +     91421 TTT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154924 3 -   7812017 TTT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9297 3 +     72585 TTT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54809 3 +     55069 TTC
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915958 3 +   3329780 TTC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3027 3 +      7119 TTT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123642 3 + 195417433 TTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237869 3 -   7961872 TTT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76492 3 -    116970 TTC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5095 3 +      6077 TTT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5188 3 +      5971 TTT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5106 3 +      5932 TTT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3451 3 -      4390 TTT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_mystax.k141_8077960                                5054 3 +      5979 TTT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1624 3 -     22275 TTT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9487 3 +     16473 TTC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110220 3 + 121099817 ttt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31787 3 -     47369 TTT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32173 3 -     79414 TTT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28864 3 -     34454 TTT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16265 3 -     22428 TTT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31419 3 -     47109 TTT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239468 3 +   5703754 TTT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9058 3 +     21866 TTT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26763 3 +     27374 TTT
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30275 3 +     58920 TTT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16773 3 -     45317 TTT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24431 3 -     42441 TTT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27109 3 -     29113 TTT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30184 3 -     48123 TTT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51249 3 +     77746 TTT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865383 1 -   1910179 --T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672462 1 +  18376816 --T
i Sorex_araneus.JH798187.1                               C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1869591 3 +   3870691 TTC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7968 3 -     97271 TTG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629             126124 3 +    196729 TTC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645155 3 +  69701581 TTC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392370 3 +   1523678 TTT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15540 3 +     22964 TTC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3948 3 +      5583 TTC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192839 3 +    199430 TTC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106807 3 -    539355 TTC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1884 3 +      9917 TGC
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8682 3 +     20590 TTC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25255 3 -     33621 TTC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20918 3 -     31044 CTC
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481385 3 -    610378 TTC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22308 3 +     26378 TTT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34984 3 -     78344 TTT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21633 3 +     25722 TTT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30008 3 -     62838 TTT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29984 3 +     46913 TTT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10791 3 -     28527 TTT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31943 3 -     64340 TTT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29981 3 -     63452 TTT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11428 3 +     22490 TTT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4783 3 -      6147 TTT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11696 3 -     13050 TTT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256926 3 -   6242583 TTT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2954 3 +     19340 TTT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175097 3 -    200418 TCC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482773 3 -  10818551 TCC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835587 2 -   4065304 T-C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9608 2 -     70247 T-C
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366970 3 -  33153633 TTC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4775 1 -     21056 --T
i Uropsilus_gracilis.UroGra_scaffold_46687               I 4 C 0
s Ursus_maritimus.KK499267.1                                183322 3 +   5085361 TTG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26477 3 -     30710 TTT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25384 3 -    147434 TTT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77517 3 +   5488506 TTC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106086 3 -    112863 TTG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175347 3 -    224448 TTC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30317 3 -     86975 TTG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1161 3 -      1899 TTT
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19266 0 +     24238 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Theropithecus_gelada.CM009954.1                           354612 59 - 186847797 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955 0 +    313613 C
e Saguinus_midas.LG03                                       392839 383 - 209938924 I
e Rattus_norvegicus.chr16                                 37024043 457 -  90668790 I
e Papio_ursinus.k141_5784434                                   367 59 -     10386 I
e Papio_papio.k141_3538738                                     407 59 +     10553 I
e Papio_kindae.k141_2214839                                  23736 59 -     27687 I
e Papio_hamadryas.Contig39                                  293831 59 -  20919399 I
e Papio_cynocephalus.k141_1507553                            11088 59 +     21308 I
e Papio_anubis.CM001495.2                                   244803 59 - 183742232 I
e Oryctolagus_cuniculus.CM000791.1                       107105947 0 - 174332312 C
e Mandrillus_sphinx.Contig270                               358625 59 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        323794 59 +  24302211 I
e Macaca_tonkeana.k141_339739                                 4304 59 +     17132 I
e Macaca_thibetana.k99_45532                                  1144 59 -      5049 I
e Macaca_silenus.Contig273                                  272506 59 +    668171 I
e Macaca_siberu.k141_2185972                                 46598 59 +     59329 I
e Macaca_radiata.k141_2139468                                 2657 59 +     14901 I
e Macaca_nigra.k141_2818840                                  50126 59 -     62418 I
e Macaca_nemestrina.KQ007038.1                              400954 59 +  25927173 I
e Macaca_mulatta.NC_041758.1                                416724 59 - 187317192 I
e Macaca_maura.k141_1103459                                  47521 59 +     51645 I
e Macaca_leonina.k141_321385                                 37777 59 -     50087 I
e Macaca_fuscata.k119_546792                                 26601 59 +     30527 I
e Macaca_fascicularis.k141_1617581                            1486 59 -      5035 I
e Macaca_cyclopis.k119_263443                                26648 59 +     30207 I
e Macaca_assamensis.Contig5                                 374380 59 -  60120075 I
e Macaca_arctoides.k141_1757516                              46718 59 -     61512 I
e Lophocebus_aterrimus.ctg367                               335329 59 -   1826925 I
e Condylura_cristata.JH655891.1                           35808250 0 +  53390261 C
e Cercocebus_torquatus.k141_2159127                          46000 59 -    148725 I
e Cercocebus_lunulatus.k141_2500334                           1616 59 -     14410 I
e Cercocebus_chrysogaster.k141_1522556                       46183 59 +     47900 I
e Cercocebus_atys.KQ010504.1                                142444 59 -   4669795 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6660  6 +     36723 TC--TA--C-------------A
s Acinonyx_jubatus.LLWD01001279.1                           814096  6 +   1699592 TC--TC--T-------------A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27341  6 +     63021 AC--TG--T-------------A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416551  6 +  29979442 TC--TA--T-------------A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216893  3 +    347723 TC--T------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 2
s Allactaga_bullata.AllBul_scaffold_20030                    19723  6 -     61208 GT--TA--T-------------G
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49307  6 +     53615 TC--TA--C-------------A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1338  6 +     13857 TC--TA--C-------------A
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17889  6 -     21945 TC--TA--C-------------A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19574  6 +     32033 TC--TA--C-------------A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73409  6 -     84148 TC--TA--C-------------A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45648  6 -     78289 TC--TA--C-------------A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45087  6 +     55831 TC--TA--C-------------A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43537  6 -     64179 TC--TA--C-------------A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            644  6 -      3959 TC--TA--C-------------A
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42162  6 +     45454 TC--TA--C-------------A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47811  6 +     70886 TC--TA--C-------------A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9984  6 +     30854 TC--TA--C-------------A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34118  6 +     42133 TC--TA--C-------------A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586935  6 +   2318259 TC--TA--T-------------A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178353  6 -    412891 TC--TA--T-------------A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52012  6 -     68529 TC--TA--T-------------A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2376  6 +     17741 TC--TA--C-------------A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3001  6 -     15923 TC--TA--C-------------G
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673283  6 +   5030052 TC--TA--C-------------G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3277  6 -     16391 TC--TA--C-------------A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2836  6 -     17186 TC--TA--C-------------A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17351  6 -     32367 TC--TA--T-------------A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21408  6 -     45910 TC--TT--C-------------C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6608  6 -     15198 TC--TA--T-------------G
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275874  6 +  21539123 TC--TA--C-------------A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12041  6 +     48076 TC--TA--C-------------A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7176  6 -     28759 TC--TA--C-------------A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34731  6 +     44353 TC--TA--C-------------A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50101  6 -     71267 TC--TA--C-------------A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24159  6 -     33135 TC--TA--C-------------A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7440  6 +     11645 TC--TT--C-------------C
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7448  6 -     19611 TC--TT--C-------------C
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964697  6 -  23207421 TC--TA--T-------------A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 3
s Balaenoptera_bonaerensis.DF411050.1                         1197  6 -     25979 TC--TA--T-------------A
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 3
s Beatragus_hunteri.BeaHun_scaffold_7278                     87941  6 +    124022 TT--TA--T-------------A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23476  6 +    288883 TC--TA--T-------------A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357866  6 +  48749331 TC--TA--T-------------A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756430  6 +   1948126 TC--TA--T-------------A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546572  6 -  45695690 TC--TA--T-------------A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531580  6 -   4408762 TC--TA--T-------------A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8968  6 +     28062 TC--TA--C-------------A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44262  6 -     91139 TC--TA--C-------------A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21788  6 +     95584 TC--TA--C-------------A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21701  6 +    119600 TC--TA--C-------------A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11356  6 +     18648 TC--TA--C-------------A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10872  6 -     13885 TC--TA--C-------------A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2958  6 -      8861 TC--TA--C-------------A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455350  6 + 189096842 TC--TA--C-------------A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2873  6 +      8664 TC--TA--C-------------A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632186  6 +  17673402 TC--TA--T-------------A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666473  6 +   7040546 TC--TA--T-------------A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210131  6 +   1652518 TC--TA--T-------------A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506458  6 +  60362399 TT--TA--T-------------A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10094  6 -     23171 TT--TA--T-------------A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223437  6 +   9314153 TT--TA--T-------------A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616572  6 +  59632846 TT--TA--T-------------A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108153  6 -  63665305 tt--ta--t-------------a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410664  6 -  46296322 TC--TA--T-------------A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592938  6 +  44709034 TC--TA--T-------------A
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    684  6 -      1607 TG--TA--C-------------A
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271663  6 +    496798 TC--TA--T-------------A
i Carlito_syrichta.NW_007259797.1                        C 0 I 4
s Carollia_perspicillata.CarPer_scaffold_107871               1478  6 +      9923 TC--TG--T-------------A
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28844  6 -     39886 TT--TA--T-------------A
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80761  6 -    217609 TC--TG--T-------------A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997572  6 +  23392119 TC--TG--C-------------A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001014  6 +  23407841 TC--TG--C-------------A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64093  6 -     66877 TC--TG--C-------------A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6271  6 -     12580 TC--TA--C-------------A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44329  6 +     53515 TC--TA--C-------------A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374097  6 -  26074798 TC--TA--C-------------A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9151  6 -     34880 TC--TA--C-------------A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68247  6 -     89041 TC--TA--C-------------A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3624  6 -      5494 TC--TA--T-------------A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493382  6 -  27778364 TT--TA--T-------------A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20215  6 +     27315 TT--TA--T-------------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28221  6 -     40656 TC--TA--C-------------A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8185  6 +     20796 TC--TA--C-------------A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13303  6 -     17524 TC--TA--C-------------A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29026  6 -     34525 TC--TA--C-------------A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12806  6 -     25376 TC--TA--C-------------A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365393  6 -  39242232 TC--TA--C-------------G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271120  6 +  21565898 TC--TA--C-------------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33488  6 -     45857 TC--TA--C-------------A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28389  6 -     32606 TC--TA--C-------------A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4551  6 +      8499 TC--TA--C-------------A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26947  6 +     70610 TC--TA--C-------------A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23908  6 +     36323 TC--TG--C-------------A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13838  6 -     19938 TC--CA--C-------------A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31813  6 -     33796 TC--TT--C-------------C
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6327  6 -     15404 TC--TT--C-------------C
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10076  6 -     32913 TC--TA--C-------------A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20489  6 -     40346 TC--TA--C-------------A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20744  6 +    216457 TC--TA--C-------------A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20533  6 +     39636 TC--TA--C-------------A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239903  6 -   2543920 TC--TA--C-------------A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            196  6 +      1057 TC--TA--C-------------A
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43599  6 -    112038 TC--TA--C-------------A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9150  6 +     34062 TC--TA--C-------------A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344809  6 +  18827391 TC--TA--C-------------A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11351  6 -     44032 TC--TA--C-------------A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306134  6 - 135778131 TC--TA--C-------------A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                   85  6 +     10270 TC--CA--C-------------T
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607561  6 -    839153 tc--ca--c-------------t
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2215791               239  6 -       558 TC--TA--C-------------A
i Chrysochloris_asiatica.ChrAsi_scaffold_2215791         C 0 I 2
s Colobus_angolensis.KN981557.1                             410540  6 -   2368649 GC--TA--C-------------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380421  6 - 200372422 GC--TA--C-------------A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3978  6 -     84244 GC--TA--C-------------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3953  6 -      8242 CT--TC--T-------------A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46037  6 -     83289 GC--TG--T-------------A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117713  6 - 224834208 GC--TA--C-------------A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10973  6 +     12657 TT--TA--T-------------A
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5543  6 +     87169 TC--TG--T-------------A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646581  6 -   1526836 TC--TA--T-------------A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19753  6 +     50838 TC--TA--C-------------A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5483  6 +     36344 TC--TA--C-------------A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29267  6 +     75252 TC--TA--C-------------A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111191  6 -   2246927 tc--ca--c-------------a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293734  6 +  12879189 TC--TT--C-------------C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633105  6 -  35494412 TC--TA--T-------------A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866469  6 -  20541912 TC--TA--T-------------A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665653  6 -   1390856 TT--TA--T-------------A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140452  6 -    198055 TT--TA--T-------------A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99982  6 -    115145 TC--TA--C-------------A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951744  6 -  37912305 TT--GA--C-------------A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6678  6 -     10735 TT--GA--C-------------A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856699  6 - 111700974 TC--TA--C-------------A
i Echinops_telfairi.JH980293.1                           C 0 I 2
s Eidolon_helvum.AWHC01266696.1                               7446  6 +     19438 TC--TA--T-------------A
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241289  6 -    607251 TC--TA--T-------------A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226918  6 +  10337057 TT--TA--C-------------A
i Elephantulus_edwardii.JH947257.1                       C 0 I 2
s Ellobius_lutescens.LOEQ01008920.1                          33567  6 +    110024 GC--TA--T-------------A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15565  6 +     18970 GC--TA--T-------------A
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917292  3 +  41312741 CC--T------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Eptesicus_fuscus.JH977646.1                             12580060  6 +  14770903 TC--TA--T-------------A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042582  6 -   4378816 TC--TA--G-------------C
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376520  6 +  39960074 TC--TA--G-------------C
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412502  6 -    498745 TC--TA--G-------------C
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667332  6 +   7059049 TG--CA--T-------------G
i Erinaceus_europaeus.JH835339.1                         I 158 C 0
s Erythrocebus_patas.Contig38                               264345  6 +  21539334 TC--TA--C-------------A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72311  6 -    133382 TC--TA--T-------------A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_57114                24  6 +     25849 TC--TA--T-------------A
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 I 3
s Eulemur_albifrons.k141_51491                               15954  6 -     24895 TC--TT--C-------------C
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43664  6 -     70999 TC--TT--C-------------C
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87634  6 +    112731 TC--TT--C-------------C
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44197  6 +     68309 TC--TT--C-------------C
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54521  6 -     65740 TC--TT--C-------------C
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25154  6 -     75513 TC--TT--C-------------C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49348  6 -     97555 TC--TT--C-------------G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6072  6 +     30972 TC--TT--C-------------C
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43792  6 -     52037 TC--TT--C-------------C
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60195  6 -    111500 TC--TT--C-------------C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248006  6 - 206538554 TC--TC--T-------------A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117792  6 - 205367284 TC--TC--T-------------A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28889  6 -     30238 TC--TC--G-------------A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923121  6 -   3816255 TC--TG--C-------------A
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126785  5 -    137831 TC--TT--C--------------
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10330  5 +     22493 TC--TT--C--------------
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22400  6 -     32986 TC--TT--C-------------C
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2340  6 -     28519 TC--TA--T-------------A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93009  6 -     95226 TC--TA--T-------------A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2478  6 -      6791 TC--TA--T-------------A
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6969  6 -      8343 TC--TA--C-------------A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255976  6 - 186649187 TC--TA--C-------------A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3546  6 -     78134 GC--TA--C-------------A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15879  6 -     40692 GC--TT--C-------------C
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37278  6 +     49394 GC--TT--T-------------C
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62149  6 -     66874 GC--TT--C-------------C
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11020  6 -     42923 GC--TT--C-------------C
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18022  6 -     53142 GC--TT--C-------------C
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31976  6 -    327341 TC--TG--T-------------A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10682  6 +     48891 TC--TG--T-------------A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933540  6 -  22651954 TC--TA--C-------------A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1411  6 +      8654 TA--CA--C-------------A
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8815  6 -     36432 TC--TA--T-------------A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552796  6 -   1711038 TC--TC--T-------------A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2234  6 -      2730 TC--TC--T-------------A
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143976  6 -    630532 TC--TA--C-------------A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71355  5 +     83186 -C--TG--T-------------A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72971  6 +    143317 TC--TG--C-------------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7021  6 +     12352 TC--TA--C-------------A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14205  6 +     55766 TC--TA--C-------------A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053805  6 + 191637585 TC--TA--C-------------A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802683  6 +  11177569 TC--TA--C-------------A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8293  6 -    135385 TC--TA--C-------------A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388016  6 +   7955117 TC--TA--C-------------C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3583  6 +     11955 TC--TT--C-------------C
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11206  6 -     16823 TC--TA--T-------------A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_3970                 73046  6 -     97402 TC--TA--T-------------A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44425  6 +    110728 TC--TA--C-------------A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64358  6 -     65777 TC--TA--T-------------A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760676  6 +  30322482 GC--TT--C-------------C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5332  6 -     13097 TC--TA--C-------------A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5086  6 +      5940 TC--TA--C-------------A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4909  6 -      5717 TC--TA--C-------------A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11295  6 -     11567 TC--TA--C-------------A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12676  6 -     12945 TC--TA--C-------------A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10188  6 +     29618 TC--TT--C-------------C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10184  6 +     31569 TC--TT--C-------------C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10194  6 +     24756 TC--TT--C-------------T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10194  6 +     16388 TC--TT--C-------------C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814682  6 -   3914936 TC--TG--T-------------A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342391  6 +    662738 TC--TA--T-------------A
i Lipotes_vexillifer.KE559953.1                          C 0 I 3
s Loris_lydekkerianus.k141_2031736                           12484  6 +     19643 TC--TT--C-------------C
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046154  6 -   6120653 TC--TT--C-------------C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086081  6 +  43346337 TC--TG--T-------------A
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615727  6 +  59628241 TT--TA--T-------------A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224424  6 -    270270 TC--TA--T-------------A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Manis_javanica.JSZB01003497.1                             674720  6 -    737560 tc--tc--t-------------c
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222020  6 +    317179 TC--TC--T-------------C
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502230  6 +  40650429 TC--TA--C-------------C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151579  6 +    207569 TC--TC--T-------------A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27407  3 -     74585 CC--T------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 3
s Meriones_unguiculatus.MerUng_scaffold_7390                 51983  6 -    140813 AC--TA--T-------------A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17431692  6 +  29670104 GC--TA--T-------------A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88675  6 +     93471 TC--TA--T-------------A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 3
s Mico_argentatus.k141_582562                                11457  6 +     17804 TC--TA--C-------------A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11957  6 -     12984 TC--TA--C-------------A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20273  6 -     26561 TC--TA--C-------------A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986026  6 +  93316391 TC--TT--C-------------C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47872  6 +    145209 TT--TA--C-------------A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_2233                186263  6 +    200668 TC--TA--T-------------A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965016  6 +  27267610 gc--ta--T-------------A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364412  6 -   8254450 TG--TA--T-------------A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43319  6 -     48117 TG--TA--T-------------A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23840  6 -     27822 TC--TA--C-------------A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9693  6 +     27589 TC--TG--T-------------A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53808  6 -     62432 TC--TT--C-------------C
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360780  6 +    437263 TC--TA--T-------------A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180496  8 +    366855 TC--CATTT-------------A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27117  6 -     82753 TC--TA--T-------------A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19710  6 -     63510 TC--TG--T-------------A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40340  6 +     47283 TC--TA--T-------------A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596186  6 + 120012414 AC--TG--T-------------A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689383  6 + 129401213 AC--TA--T-------------A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217725  6 +  89631738 AC--TT--T-------------A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498668  6 + 130317789 AC--TA--T-------------A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85385  6 -     86153 TC--TA--C-------------A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356317  2 +  14710649 --------C-------------A
i Mustela_putorius.JH418006.1                            I 4 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64268  6 +     67721 TG--TA--C-------------A
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794620  6 +  10118263 TC--TG--T-------------A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388794  6 +   6019432 TC--TG--T-------------A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384820  6 +   4330536 TC--TG--T-------------A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3614  6 +     18357 TC--TG--T-------------A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120960 18 +    130748 TC--CA--CAAAAC-TCTCCATT
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947889  6 +   3037898 gt--ta--t-------------a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30565  6 +     34575 TC--TA--C-------------A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233446  6 -   7148211 TC--TA--T-------------A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_7894                   129107  6 -    149072 TC--TA--T-------------A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54907  6 -    132029 TC--TA--C-------------A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11002  6 -     16345 TC--TA--C-------------A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16887  6 +     22201 TC--TA--C-------------A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415108  6 -  22158432 TC--TA--C-------------A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27285  6 -     54323 TC--TA--C-------------A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199323  6 +   9404916 TT--TA--T-------------A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639381  6 + 196305487 TC--CT--C-------------C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1984  6 -      9413 TC--CT--C-------------C
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566764  6 - 199412804 TC--CT--C-------------C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558071  6 -   3988456 TC--TA--C-------------A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056358  6 -  11899542 TC--TG--T-------------A
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453112  6 +   2017862 TC--TA--T-------------A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437897  6 -    630418 TC--TA--T-------------A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16091  6 +    150152 TC--TA--C-------------A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95689  6 -    140218 GC--TA--T-------------A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6232  6 -     41509 AC--TG--T-------------A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103848  6 +  10937097 tc--ta--t-------------a
i Orcinus_orca.KB316932.1                                C 0 I 3
s Orycteropus_afer.OryAfe_flattened_line_201229                854  6 +     11607 TC--TA--C-------------A
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 I 290
s Otocyon_megalotis.JAEUCK010005147.1                        40366  6 +    559221 tt--ta--t-------------t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41932  6 -     51505 TC--TT--C-------------C
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354936  6 +   1103335 TC--TT--C-------------C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405802  6 -  44047080 TC--TG--T-------------A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6321  6 +     17875 TC--TA--T-------------A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             13690  8 -     26668 TCCTTA--C-------------A
i Pan_troglodytes.NBAG03003091.1                         I 3 I 9
s Panthera_onca.PanOnc_flattened_line_3271                   25712  6 -    230217 TC--TC--T-------------A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463038  6 -  18783137 TC--TC--T-------------A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973697  6 +   8748460 TC--TC--T-------------A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617327  6 +   2937107 TC--TA--T-------------A
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16292  6 +     78924 TC--TA--T-------------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28263  6 +     31479 TC--TT--C-------------C
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20631  6 -     24908 TC--TT--C-------------C
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3086  6 +      9367 TG--GA--C-------------A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249455  6 +  18517816 AC--TG--T-------------A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33102  6 -     56120 TC--TA--C-------------A
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5374  6 -     63832 TC--TA--T-------------A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 3
s Piliocolobus_badius.k141_2704958                            3928  6 +     55023 TC--TA--C-------------A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3466  6 -     89929 TC--TA--C-------------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4056  6 +     40849 TC--TA--C-------------A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255731  6 +  14605196 TC--TA--C-------------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5198  6 +     22231 TC--TA--T-------------A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65967  6 +    207309 TC--TA--T-------------G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7055  6 -     25401 TC--TA--T-------------G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32803  6 +     58159 TC--TA--T-------------G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33079  6 +     63561 TC--TA--T-------------G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32839  6 +     51148 TC--TA--T-------------G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557809  6 -   4542175 TC--TA--T-------------G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32823  6 +     51125 TC--TA--T-------------G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2391  6 +     19503 TC--TA--T-------------G
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 3
s Plecturocebus_bernhardi.k141_2549090                        9241  6 +     39866 TC--TA--C-------------A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4323  6 -      9282 TC--TA--C-------------A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43727  6 -     87950 TC--TA--C-------------A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44121  6 -     88961 TC--TA--C-------------A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8819  6 -     39403 TC--TA--C-------------A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43770  6 +     87928 TC--TA--C-------------A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8818  6 -     60166 TC--TA--C-------------A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15755  6 -     67232 TC--TA--C-------------A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43671  6 -     90634 TC--TA--C-------------A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45138  6 +     89403 TC--TA--C-------------A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179117  6 - 189387572 TC--TA--C-------------A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193934  6 -   9816681 TC--TA--C-------------A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29076  6 +     69807 TC--TA--C-------------A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46257  6 -     80239 TC--TA--C-------------A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5402  6 +      7663 TA--CA--C-------------A
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983824  6 +   4620579 GA--TT--C-------------C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567334  6 -   2598838 TC--TT--C-------------C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4972  6 -      7103 TC--TT--C-------------C
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5569  6 -     11706 TC--TT--C-------------C
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9306  6 -     30655 TC--TT--C-------------C
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35620  6 +     46564 TC--TT--C-------------C
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95899  6 -     98465 TC--TT--C-------------C
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9538  6 +     35169 TC--TT--C-------------C
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39506  6 +     52041 AC--TA--T-------------A
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53389  6 -     66298 TC--CA--T-------------A
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5887  3 -     18639 CC--T------------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 3
s Pteropus_alecto.KB030862.1                               5841996  6 -  28871421 tc--ta--t-------------a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538511  6 -   4952924 tc--ta--t-------------a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100355  6 +  38429054 TC--TC--T-------------A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28443  6 +     91421 TC--CA--C-------------A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154927  6 -   7812017 TC--TA--C-------------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9300  6 +     72585 TC--TA--C-------------A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54812  6 +     55069 TC--TA--T-------------A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915961  6 +   3329780 TC--TC--T-------------A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3030  6 +      7119 TC--TA--C-------------A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123645  6 + 195417433 TC--TA--C-------------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237872  6 -   7961872 TC--TA--C-------------A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76495  6 -    116970 TC--TA--T-------------A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5098  6 +      6077 TC--TA--C-------------A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5191  6 +      5971 TC--TA--C-------------A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5109  6 +      5932 TC--TA--C-------------A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3454  6 -      4390 TC--TA--C-------------A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_mystax.k141_8077960                                5057  6 +      5979 TC--TA--C-------------A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1627  6 -     22275 TC--TA--C-------------A
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9490  6 +     16473 TC--TA--T-------------G
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110223  6 + 121099817 tc--ta--c-------------a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31790  6 -     47369 TC--TA--C-------------A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32176  6 -     79414 TC--TA--C-------------A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28867  6 -     34454 TC--TA--C-------------A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16268  6 -     22428 TC--TA--C-------------A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31422  6 -     47109 TC--TA--C-------------A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239471  6 +   5703754 TC--TA--C-------------A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9061  6 +     21866 TC--TA--C-------------A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26766  6 +     27374 TC--TA--C-------------A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30278  6 +     58920 TC--TA--C-------------A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16776  6 -     45317 TC--TA--C-------------A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24434  6 -     42441 TC--TA--C-------------A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27112  6 -     29113 TC--TA--C-------------A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30187  6 -     48123 TC--TA--C-------------A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51252  6 +     77746 GC--TG--T-------------A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865384  6 -   1910179 TG--TA--T-------------A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672466  6 +  18376816 TT--TA--T-------------G
i Sorex_araneus.JH798187.1                               I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1869594  6 +   3870691 TC--TA--C-------------C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7972  1 -     97271 ----------------------A
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126127  6 +    196729 TC--TG--T-------------A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645158  6 +  69701581 TC--TA--T-------------A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392373  6 +   1523678 TC--TA--C-------------A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15543  6 +     22964 TC--TA--T-------------A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3951 19 +      5583 TC--CA--CAAAACCTCTCCATT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192842  6 +    199430 TT--TA--C-------------A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106810  6 -    539355 TT--TA--C-------------A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1887  6 +      9917 TC--TC--T-------------A
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8685  6 +     20590 TC--TC--T-------------A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25258  6 -     33621 GC--TA--C-------------A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20921  6 -     31044 TC--CA--C-------------A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481388  6 -    610378 TC--TA--T-------------G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22311  6 +     26378 TC--TA--C-------------A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34987  6 -     78344 TC--TA--C-------------A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21636  6 +     25722 TC--TA--C-------------A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30011  6 -     62838 TC--TA--C-------------A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29987  6 +     46913 TC--TA--C-------------A
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10794  6 -     28527 TC--TA--C-------------A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31946  6 -     64340 TC--TA--C-------------A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29984  6 -     63452 TC--TA--C-------------A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11431  6 +     22490 TC--TA--C-------------A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4786  6 -      6147 TC--TA--C-------------A
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11699  6 -     13050 TC--TA--C-------------A
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256929  6 -   6242583 TC--TA--C-------------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2957  6 +     19340 TC--TA--C-------------A
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175100  6 -    200418 TC--TA--T-------------A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482776  6 -  10818551 TC--AA--C-------------A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835589  6 -   4065304 CC--TA--C-------------A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9610  6 -     70247 CC--TA--C-------------A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366973  6 -  33153633 TC--TA--T-------------A
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_46687                    4776  6 -     21056 TC--TA--T-------------A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183325  6 +   5085361 TC--TA--T-------------A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26480  6 -     30710 TC--TT--C-------------C
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25387  6 -    147434 TC--TT--C-------------C
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77520  6 +   5488506 TC--TA--T-------------A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106089  6 -    112863 TT--TA--T-------------A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175350  6 -    224448 TC--TA--C-------------C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30320  6 -     86975 TC--TA--T-------------A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1164  6 -      1899 GC--TA--T-------------A
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19266  0 +     24238 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Theropithecus_gelada.CM009954.1                           354612 59 - 186847797 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955  0 +    313613 C
e Saguinus_midas.LG03                                       392839 383 - 209938924 I
e Rattus_norvegicus.chr16                                 37024043 457 -  90668790 I
e Papio_ursinus.k141_5784434                                   367 59 -     10386 I
e Papio_papio.k141_3538738                                     407 59 +     10553 I
e Papio_kindae.k141_2214839                                  23736 59 -     27687 I
e Papio_hamadryas.Contig39                                  293831 59 -  20919399 I
e Papio_cynocephalus.k141_1507553                            11088 59 +     21308 I
e Papio_anubis.CM001495.2                                   244803 59 - 183742232 I
e Oryctolagus_cuniculus.CM000791.1                       107105947  0 - 174332312 C
e Mandrillus_sphinx.Contig270                               358625 59 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        323794 59 +  24302211 I
e Macaca_tonkeana.k141_339739                                 4304 59 +     17132 I
e Macaca_thibetana.k99_45532                                  1144 59 -      5049 I
e Macaca_silenus.Contig273                                  272506 59 +    668171 I
e Macaca_siberu.k141_2185972                                 46598 59 +     59329 I
e Macaca_radiata.k141_2139468                                 2657 59 +     14901 I
e Macaca_nigra.k141_2818840                                  50126 59 -     62418 I
e Macaca_nemestrina.KQ007038.1                              400954 59 +  25927173 I
e Macaca_mulatta.NC_041758.1                                416724 59 - 187317192 I
e Macaca_maura.k141_1103459                                  47521 59 +     51645 I
e Macaca_leonina.k141_321385                                 37777 59 -     50087 I
e Macaca_fuscata.k119_546792                                 26601 59 +     30527 I
e Macaca_fascicularis.k141_1617581                            1486 59 -      5035 I
e Macaca_cyclopis.k119_263443                                26648 59 +     30207 I
e Macaca_assamensis.Contig5                                 374380 59 -  60120075 I
e Macaca_arctoides.k141_1757516                              46718 59 -     61512 I
e Lophocebus_aterrimus.ctg367                               335329 59 -   1826925 I
e Jaculus_jaculus.JH725527.1                               1241237  0 +   9596543 C
e Condylura_cristata.JH655891.1                           35808250  0 +  53390261 C
e Cercocebus_torquatus.k141_2159127                          46000 59 -    148725 I
e Cercocebus_lunulatus.k141_2500334                           1616 59 -     14410 I
e Cercocebus_chrysogaster.k141_1522556                       46183 59 +     47900 I
e Cercocebus_atys.KQ010504.1                                142444 59 -   4669795 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6666  9 +     36723 TAA-A-CT-----C----T---C
s Acinonyx_jubatus.LLWD01001279.1                           814102  9 +   1699592 GAA-A-CT-----T----C---C
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27347  9 +     63021 TAA-A-CT-----C----A---C
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416557  9 +  29979442 TAA-A-CT-----T----T---C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216898  9 +    347723 TAA-a-ct-----t----t---c
i Ailurus_fulgens.LNAC01001112.1                         I 2 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19729  9 -     61208 TAA-A-CT-----C----A---C
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49313  8 +     53615 TAA-A-CT-----G----T----
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1344  8 +     13857 TAA-A-CT-----T----T----
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17895  8 -     21945 TAA-A-CT-----T----T----
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19580  8 +     32033 TAA-A-CT-----T----T----
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73415  9 -     84148 TAA-A-CT-----C----T---C
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45654  9 -     78289 TAA-A-CT-----C----T---C
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45093  9 +     55831 TAA-A-CT-----C----T---C
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43543  9 -     64179 TAA-A-CT-----C----T---C
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            650  9 -      3959 TAA-A-CT-----C----T---C
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42168  9 +     45454 TAA-A-CT-----C----T---C
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47817  9 +     70886 TAA-A-CT-----C----T---C
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9990  9 +     30854 TAA-A-CT-----C----T---C
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34124  9 +     42133 TAA-A-CT-----C----T---C
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586941  8 +   2318259 TAA-A-CT-----G----T----
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_1412                      178359  9 -    412891 TAA-A-TT-----C----T---C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52018  8 -     68529 TAT-T-CT-----G----T----
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 4
s Aotus_azarae.k141_887050                                    2382  9 +     17741 TAA-A-CT-----C----T---C
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3007  9 -     15923 TAA-A-CT-----C----T---C
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673289  9 +   5030052 TAA-A-CT-----C----T---C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3283  9 -     16391 TAA-A-CT-----C----T---C
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2842  9 -     17186 TAA-A-CT-----C----T---C
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17357  9 -     32367 TAA-A-AT-----C----C---A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21414  9 -     45910 TAA-C-CT-----C----T---C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6614  9 -     15198 TAA-A-CT-----G----T---C
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275880  9 +  21539123 TTA-A-CT-----C----T---C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12047  9 +     48076 TAA-A-CT-----C----T---C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7182  9 -     28759 TAA-A-CT-----C----T---C
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34737  9 +     44353 TTA-A-CT-----C----T---C
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50107  9 -     71267 TAA-A-CT-----C----T---C
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24165  9 -     33135 TAA-A-CT-----C----T---C
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7446  9 +     11645 TAA-A-CT-----C----T---T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7454  9 -     19611 TAA-A-TT-----C----T---T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964706  4 -  23207421 ------CT-----G----T----
i Balaenoptera_acutorostrata.KI537508.1                  I 3 I 4
s Balaenoptera_bonaerensis.DF411050.1                         1206  4 -     25979 ------CT-----G----T----
i Balaenoptera_bonaerensis.DF411050.1                    I 3 I 4
s Beatragus_hunteri.BeaHun_scaffold_7278                     87947  8 +    124022 TAA-A-CT-----A----T----
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 4
s Bison_bison.KN261452.1                                     23482  8 +    288883 TAA-A-CT-----G----T----
i Bison_bison.KN261452.1                                 C 0 I 4
s Bos_indicus.CM003047.1                                  20357872  8 +  48749331 TAA-A-CT-----G----T----
i Bos_indicus.CM003047.1                                 C 0 I 4
s Bos_mutus.JH880303.1                                      756436  8 +   1948126 TAA-A-CT-----G----T----
i Bos_mutus.JH880303.1                                   C 0 I 4
s Bos_taurus.CM000203.6                                   27546578  8 -  45695690 TAA-A-CT-----G----T----
i Bos_taurus.CM000203.6                                  C 0 I 4
s Bubalus_bubalis.KI419123.1                               1531586  8 -   4408762 TAA-A-CT-----G----C----
i Bubalus_bubalis.KI419123.1                             C 0 I 4
s Cacajao_ayresi.k141_96119                                   8974  9 +     28062 TAA-A-CT-----C----T---G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44268  9 -     91139 TAA-A-CT-----C----T---G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21794  9 +     95584 TAA-A-CT-----C----T---G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21707  9 +    119600 TAA-A-CT-----C----T---G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11362  9 +     18648 TAA-A-CT-----C----T---C
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10878  9 -     13885 TAA-A-CT-----C----T---C
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2964  9 -      8861 AAA-A-CT-----C----T---C
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455356  9 + 189096842 AAA-A-CT-----C----T---C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2879  9 +      8664 AAA-A-CT-----C----T---C
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632192 12 +  17673402 TAA-A-CT-----G----TATAC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666479 12 +   7040546 TAA-A-CT-----G----TATAC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210137 12 +   1652518 TAA-A-CT-----G----TATAC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506464  6 +  60362399 TAA-A-CT---------------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10100  6 -     23171 TAA-A-CT---------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223443  6 +   9314153 TAA-A-CT---------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616578  6 +  59632846 TAA-A-CT---------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108159  6 -  63665305 taa-a-ct---------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410670  8 -  46296322 TAA-A-CT-----G----T----
i Capra_aegagrus.CM003241.1                              C 0 I 4
s Capra_hircus.CM004588.1                                 26592944  8 +  44709034 TAA-A-CT-----G----T----
i Capra_hircus.CM004588.1                                C 0 I 4
s Capromys_pilorides.CapPil_scaffold_762519                    690  7 -      1607 GAA-T-CT-----A---------
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271673  3 +    496798 -------------C----T---C
i Carlito_syrichta.NW_007259797.1                        I 4 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1484  9 +      9923 TAA-A-CT-----C----T---C
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28850  9 -     39886 CAA-A-CT-----T----T---C
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80767 12 -    217609 TAA-A-CT-----C----TGTAC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997578  7 +  23392119 GAA-A-CT-----G---------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001020  7 +  23407841 GAA-A-CT-----G---------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64099  7 -     66877 GAA-A-CT-----G---------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6277  9 -     12580 TAA-A-CT-----C----T---C
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44335  9 +     53515 TAA-A-CT-----C----T---C
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374103  9 -  26074798 TAA-A-CT-----C----T---C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9157  9 -     34880 TAA-A-CT-----C----T---C
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68253  9 -     89041 TAA-A-CT-----C----T---C
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3630  4 -      5494 TAA-A------------------
i Cephalopachus_bancanus.k141_1689090                    C 0 I 3
s Ceratotherium_simum.JH767749.1                          15493388  6 -  27778364 TAA-A-CT---------------
i Ceratotherium_simum.JH767749.1                         C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20221  6 +     27315 TAA-A-CT---------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 4
s Cercopithecus_ascanius.k141_3120866                        28227  8 -     40656 TAA-A-CT-----G----T----
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8191  8 +     20796 TAA-A-CT-----G----T----
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13309  8 -     17524 TAA-A-CT-----G----T----
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29032  8 -     34525 TAA-A-CT-----G----T----
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12812  8 -     25376 TAA-A-CT-----G----T----
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365399  8 -  39242232 TAA-A-CT-----G----T----
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271126  8 +  21565898 TAA-A-CT-----G----T----
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33494  8 -     45857 TAA-A-CT-----G----T----
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28395  8 -     32606 TAA-A-CT-----G----T----
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4557  8 +      8499 TAA-A-CT-----G----T----
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26953  8 +     70610 TAA-A-CT-----G----T----
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23914  8 +     36323 TAA-A-CT-----G----T----
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13844  4 -     19938 TCA-G------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31819  9 -     33796 TAA-A-CT-----C----T---C
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6333  9 -     15404 TAA-A-CT-----C----T---C
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10082  9 -     32913 TAA-A-CT-----C----T---G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20495  9 -     40346 TAA-A-CT-----C----T---G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20750  9 +    216457 TAA-A-CT-----C----T---G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20539  9 +     39636 TAA-A-CT-----C----T---G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239909  7 -   2543920 GAA-A-CT-----G---------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            202  9 +      1057 TAA-A-CT-----C----T---C
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43605  9 -    112038 TAA-A-CT-----C----T---G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9156  9 +     34062 TAA-A-CT-----C----T---G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344815  8 +  18827391 TAA-A-CT-----T----T----
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11357  8 -     44032 TAA-A-CT-----T----T----
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306140  8 - 135778131 TAA-A-CT-----G----T----
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                   91  4 +     10270 GCA-G------------------
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607567  4 -    839153 gCA-G------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2215791               247 10 -       558 ----A-CT-----CCTACT---G
i Chrysochloris_asiatica.ChrAsi_scaffold_2215791         I 2 I 101
s Colobus_angolensis.KN981557.1                             410546  8 -   2368649 TAA-A-CT-----G----T----
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380427  8 - 200372422 TAA-A-CT-----G----T----
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3984  8 -     84244 TAA-A-CT-----G----T----
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3959  9 -      8242 TAA-A-TG-----T----G---C
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46043  9 -     83289 TAA-A-CT-----C----A---A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117719  9 - 224834208 TAA-A-CT-----C----A---C
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10979  9 +     12657 TAA-G-CT-----T----T---C
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5549  9 +     87169 TAA-A-CT-----T----T---C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646587  9 -   1526836 CAA-A-CT-----C----T---C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19759  7 +     50838 GAA-A-CT-----A---------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5489  7 +     36344 GAA-A-CT-----G---------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29273  7 +     75252 GAA-A-CT-----G---------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111197  4 -   2246927 tca-g------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293740  9 +  12879189 TAA-A-CT-----C----T---C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633111  3 -  35494412 TAA--------------------
i Delphinapterus_leucas.KZ290073.1                       C 0 I 6
s Desmodus_rotundus.KZ672289.1                            11866475  8 -  20541912 CAA-A-CT-----C----T----
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665659  9 -   1390856 TAA-A-CT-----C----T---C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                  140458  9 -    198055 TAA-A-CT-----C----T---C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 3
s Dinomys_branickii.DinBra_scaffold_10381                    99988  7 -    115145 GAA-A-CT-----G---------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951750  9 -  37912305 TCA-A-CT-----C----T---C
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6684  9 -     10735 TCA-A-CT-----C----T---C
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856707 11 - 111700974 --A-A-TG-----CATAGG---G
i Echinops_telfairi.JH980293.1                           I 2 C 0
s Eidolon_helvum.AWHC01266696.1                               7452  9 +     19438 TAA-A-CT-----T----G---C
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241295  8 -    607251 TAA-A-CT-----G----T----
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 4
s Elephantulus_edwardii.JH947257.1                         1226926 11 +  10337057 --A-A-Tt-----cacaat---g
i Elephantulus_edwardii.JH947257.1                       I 2 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33573  9 +    110024 TAA-A-CT-----C----A---C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15571  9 +     18970 TAA-A-CT-----C----A---C
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917298  9 +  41312741 TAA-A-CT-----T----T---C
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                             12580066  9 +  14770903 TAA-A-CT-----C----T---C
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042588  9 -   4378816 TAA-A-CT-----C----T---C
i Equus_asinus.JREZ01000139.1                            C 0 I 18
s Equus_caballus.CM000403.2                               21376526  9 +  39960074 TAA-A-CT-----C----T---C
i Equus_caballus.CM000403.2                              C 0 I 18
s Equus_przewalskii.KK951119.1                              412508  9 -    498745 TAA-A-CT-----C----T---C
i Equus_przewalskii.KK951119.1                           C 0 I 18
s Erinaceus_europaeus.JH835339.1                           3667338 10 +   7059049 ACA-A-GT-----C----TA--C
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264351  8 +  21539334 TAA-A-CT-----C----T----
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72320  4 -    133382 ------CT-----G----T----
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 3 I 4
s Eubalaena_japonica.EubJap_flattened_line_57114                33  4 +     25849 ------CT-----G----T----
i Eubalaena_japonica.EubJap_flattened_line_57114         I 3 I 4
s Eulemur_albifrons.k141_51491                               15960  9 -     24895 TAA-A-CT-----G----T---C
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43670  9 -     70999 TAA-A-CT-----G----T---C
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87640  9 +    112731 TAA-A-CT-----G----T---C
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44203  9 +     68309 TAA-A-CT-----G----T---C
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54527  9 -     65740 TAA-A-CT-----G----T---C
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25160  9 -     75513 TAA-A-CT-----G----T---C
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49354  9 -     97555 TAA-A-CT-----G----T---C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6078  9 +     30972 TAA-A-CT-----G----T---C
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43798  9 -     52037 TAA-A-CT-----G----T---C
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60201  9 -    111500 TAA-A-CT-----G----T---C
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248012  9 - 206538554 GAA-A-CT-----T----C---C
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117798  9 - 205367284 GAA-A-CT-----T----C---C
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28895  9 -     30238 GAA-A-CT-----T----C---C
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923127  7 -   3816255 GAA-A-CT-----G---------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galagoides_demidoff.k141_561628                            22406  9 -     32986 TAA-C-CG-----C----T---C
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2346  9 -     28519 TAA-A-CT-----C----T---C
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93015  8 -     95226 TAA-A-CT-----G----T----
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 4
s Glis_glis.GliGli_scaffold_163929                            2484  9 -      6791 TAA-A-CT-----C----T---C
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6975  9 -      8343 TAA-A-CT-----C----T---C
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255982  9 - 186649187 TAA-A-CT-----C----T---C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3552  5 -     78134 TAA-G-C----------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Hapalemur_alaotrensis.k141_330369                          15885  9 -     40692 TCA-A-CT-----G----T---C
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37284  9 +     49394 TCA-A-CT-----G----T---C
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62155  9 -     66874 TCA-A-CT-----G----T---C
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11026  9 -     42923 TCA-A-CT-----G----T---C
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18028  9 -     53142 TCA-A-CT-----G----T---C
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31982  9 -    327341 TAA-G-CT-----T----T---C
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10688  6 +     48891 TAA-A-CT---------------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933546  7 -  22651954 GAA-A-CT-----G---------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1417 13 +      8654 TAA-A-GT-----CATACT---G
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8821  9 -     36432 TAA-ACCT-----G----T----
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 4
s Hipposideros_armiger.JXIK01000431.1                      1552802  9 -   1711038 GAA-A-CT-----G----G---C
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2240  9 -      2730 GAA-A-CT-----G----G---C
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143982  9 -    630532 TAA-C-CT-----C----T---C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71360  9 +     83186 TAA-A-CT-----T----T---C
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72977  7 +    143317 GAA-A-CT-----G---------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7027  9 +     12352 TAA-A-CT-----C----T---C
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14211  9 +     55766 TAA-A-CT-----C----T---C
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053811  9 + 191637585 TAA-A-CT-----G----T---C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802689  9 +  11177569 TAA-A-CT-----G----T---C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8299  7 -    135385 GAA-A-CT-----G---------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388022  9 +   7955117 TAA-A-CT-----C----T---C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3589  9 +     11955 TAA-A-CT-----C----T---T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11215  4 -     16823 ------CT-----G----T----
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 3 I 4
s Kogia_breviceps.KogBre_flattened_line_3970                 73052  3 -     97402 TAA--------------------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 8
s Lagothrix_lagothricha.k141_246028                          44431  9 +    110728 TAA-A-CT-----C----T---C
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64364  9 -     65777 TAA-A-CT-----C----T---C
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760682  9 +  30322482 TCA-A-CT-----G----T---C
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5338  9 -     13097 TAA-A-CT-----C----T---C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5092  9 +      5940 TAA-A-CT-----C----T---C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4915  9 -      5717 TAA-A-CT-----C----T---C
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11301  9 -     11567 TAA-A-CT-----C----T---C
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12682  9 -     12945 TAA-A-CT-----C----T---C
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10194  9 +     29618 TAA-A-CT-----C----T---C
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10190  9 +     31569 TAA-A-CT-----C----T---C
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10200  9 +     24756 TAA-A-CT-----C----T---C
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10200  9 +     16388 TAA-A-CT-----C----T---C
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814688  9 -   3914936 TAA-A-CT-----T----T---C
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342400  4 +    662738 ------CT-----G----T----
i Lipotes_vexillifer.KE559953.1                          I 3 I 4
s Loris_lydekkerianus.k141_2031736                           12490  9 +     19643 TAA-C-CT-----C----T---C
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046160  9 -   6120653 TAA-C-CT-----C----T---C
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086087 13 +  43346337 TAA-A-CT-----CATACT---G
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615733  6 +  59628241 TAA-A-CT---------------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224430  9 -    270270 TAA-A-CT-----T----A---C
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Manis_javanica.JSZB01003497.1                             674726  9 -    737560 tat-a-CT-----C----T---C
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222026  9 +    317179 TAT-A-CT-----C----T---C
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502236  9 +  40650429 TAA-C-CT-----C----T---C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151585  9 +    207569 TAA-A-CT-----T----G---C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27413  9 -     74585 TAA-A-CT-----T----T---C
i Mellivora_capensis.MelCap_flattened_line_19308         I 3 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 51989  9 -    140813 TAA-T-TT-----C----C---C
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17431698  9 +  29670104 TAT-A-AT-----A----T---T
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88684  4 +     93471 ------CT-----G----T----
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 3 I 4
s Mico_argentatus.k141_582562                                11463  9 +     17804 TAA-A-CT-----C----T---C
i Mico_argentatus.k141_582562                            C 0 I 1
s Mico_humeralifer.k141_1180625                              11963  9 -     12984 TAA-A-CT-----C----T---C
i Mico_humeralifer.k141_1180625                          C 0 I 1
s Mico_schneideri.k141_1877700                                     20279  9 -     26561 TAA-A-CT-----C----T---C
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986032  9 +  93316391 TAA-A-CT-----C----T---C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47880 11 +    145209 --A-A-CT-----CATAGG---G
i Microgale_talazaci.MicTal_scaffold_6613                I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186269  9 +    200668 TAA-A-AT-----C----T---C
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965022  9 +  27267610 TAA-A-CT-----C----A---C
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364418  9 -   8254450 CAA-A-CT-----G----T---C
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43325  9 -     48117 CAA-A-CT-----G----T---C
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23846  8 -     27822 TAA-A-CT-----G----T----
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9699  9 +     27589 TAA-A-CT-----T----T---C
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53814  9 -     62432 TAA-A-CT-----C----T---C
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360789  4 +    437263 ------CT-----G----T----
i Monodon_monoceros.MonMon_M_scaffold_103                I 3 I 4
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180504  9 +    366855 TAA-A-CT-----C----T---C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27123  8 -     82753 CAA-A-CT-----G----T----
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 4
s Mungos_mungo.MunMun_flattened_line_18455                   19716  9 -     63510 TAA-G-CT-----T----T---C
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40346  9 +     47283 TAA-A-CT-----C----T---C
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596192  9 + 120012414 TAA-A-CT-----T----A---C
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689389  9 + 129401213 TAA-A-TT-----C----A---C
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217731  9 +  89631738 TAA-A-CT-----C----A---C
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498674  9 + 130317789 TAA-A-TT-----C----A---C
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85391  9 -     86153 TAA-A-CC-----T----T---C
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356319  9 +  14710649 TAA-A-CT-----T----T---C
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64274  7 +     67721 GAA-A-CT-----G---------
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794626  6 +  10118263 TAA-A-CT---------------
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                4388800  6 +   6019432 TAA-A-CT---------------
i Myotis_davidii.KB100139.1                              C 0 I 1
s Myotis_lucifugus.GL429869.1                               384826  6 +   4330536 TAA-A-CT---------------
i Myotis_lucifugus.GL429869.1                            C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_66571                         3620  6 +     18357 TGA-A-CT---------------
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120978  4 +    130748 ACA-G------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947895  8 +   3037898 tgA-A-GT-----A----A----
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_1350636                              30571  8 +     34575 TAA-A-CT-----G----T----
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233455  4 -   7148211 ------CT-----G----T----
i Neophocaena_asiaeorientalis.KZ687982.1                 I 3 I 4
s Noctilio_leporinus.NocLep_scaffold_7894                   129113  9 -    149072 TAA-A-CT-----C----T---C
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54913  9 -    132029 TAA-A-CT-----C----T---C
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11008  9 -     16345 TAA-A-CT-----C----T---C
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16893  9 +     22201 TAA-A-CT-----C----T---C
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415114  9 -  22158432 TAA-A-CT-----C----T---C
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27291  9 -     54323 TAA-A-CT-----C----T---C
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199329  9 +   9404916 TAA-A-CT-----T----T---C
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639387  9 + 196305487 TAA-C-CT-----C----T---C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1990  9 -      9413 TAA-C-CT-----C----T---C
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566770  9 - 199412804 TAA-C-CT-----C----T---C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558077  9 -   3988456 GAA-A-TT-----C----T---C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056364  7 -  11899542 GAA-A-CT-----A---------
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453118  5 +   2017862 TAA-A-C----------------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437903  8 -    630418 TAA-A-CT-----G----T----
i Odocoileus_virginianus.KZ100018.1                      C 0 I 4
s Okapia_johnstoni.LVCL01S0005463.1                          16097  8 +    150152 TAA-A-CT-----G----T----
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 4
s Ondatra_zibethicus.OndZib_scaffold_7387                    95695  9 -    140218 TAA-A-CT-----C----A---C
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6238  9 -     41509 TAA-A-CT-----C----A---C
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103857  4 +  10937097 ------CT-----G----T----
i Orcinus_orca.KB316932.1                                I 3 I 4
s Orycteropus_afer.OryAfe_flattened_line_201229               1150 13 +     11607 TAA-A-CT-----TATACT---G
i Orycteropus_afer.OryAfe_flattened_line_201229          I 290 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40372  9 +    559221 taa-a-ct-----t----t---c
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41938  9 -     51505 TAA-C-CT-----C----T---C
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354942  9 +   1103335 TAA-C-CT-----C----T---C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405808  8 -  44047080 TAA-A-CT-----G----T----
i Ovis_aries.CM001607.2                                  C 0 I 4
s Ovis_canadensis.OviCan_scaffold_67953                       6327  8 +     17875 TAA-A-CT-----G----T----
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 4
s Pan_troglodytes.CM009242.2                               1474010  9 - 189151597 TAA-A-CT-----C----T---C
i Pan_troglodytes.CM009242.2                             I 6 I 7
s Panthera_onca.PanOnc_flattened_line_3271                   25718  9 -    230217 GAA-A-CT-----T----C---C
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463044  9 -  18783137 GAA-A-CT-----T----C---C
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973703  9 +   8748460 GAA-A-CT-----T----C---C
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617333  8 +   2937107 TAA-A-CT-----G----T----
i Pantholops_hodgsonii.KE114653.1                        C 0 I 4
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16298  9 +     78924 TAA-A-CT-----T----T---C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28269  9 +     31479 TAA-C-CT-----C----T---C
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20637  9 -     24908 TAA-C-CT-----C----T---C
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3092  9 +      9367 TCG-A-CT-----C----T---C
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249461  9 +  18517816 CAA-A-CT-----C----A---C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33108  7 -     56120 GAA-A-TT-----G---------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5383  4 -     63832 ------CT-----G----T----
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 3 I 4
s Piliocolobus_badius.k141_2704958                            3934  8 +     55023 TAA-A-CT-----G----T----
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3472  8 -     89929 TAA-A-CT-----G----T----
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4062  8 +     40849 TAA-A-CT-----G----T----
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255737  8 +  14605196 TAA-A-CT-----G----T----
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5204  9 +     22231 TAA-A-CT-----C----T---C
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65973  9 +    207309 TAA-A-CT-----C----T---G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7061  9 -     25401 TAA-A-CT-----C----T---G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32809  9 +     58159 TAA-A-CT-----C----T---G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33085  9 +     63561 TAA-A-CT-----C----T---G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32845  9 +     51148 TAA-A-CT-----C----T---G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557815  9 -   4542175 TAA-A-CT-----C----T---G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32829  9 +     51125 TAA-A-CT-----C----T---G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2400  4 +     19503 ------CT-----G----T----
i Platanista_gangetica.PlaMin_flattened_line_83166       I 3 I 4
s Plecturocebus_bernhardi.k141_2549090                        9247  9 +     39866 TAA-A-CT-----C----T---G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4329  9 -      9282 TAA-A-CT-----C----T---G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43733  9 -     87950 TAA-A-CT-----C----T---G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44127  9 -     88961 TAA-A-CT-----C----T---G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8825  9 -     39403 TAA-A-CT-----C----T---G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43776  9 +     87928 TAA-A-CT-----C----T---G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8824  9 -     60166 TAA-A-CT-----C----T---G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15761  9 -     67232 TAA-A-CT-----C----T---G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43677  9 -     90634 TAA-A-CT-----C----T---G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45144  9 +     89403 TAA-A-CT-----C----T---G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179123  9 - 189387572 TAA-A-CT-----C----T---C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193940  9 -   9816681 TAA-A-CT-----C----T---C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29082  8 +     69807 TAA-A-CT-----G----T----
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46263  8 -     80239 TAA-A-CT-----G----T----
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5408 13 +      7663 TAA-A-GT-----CATACT---G
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983830  9 +   4620579 TCA-A-CT-----G----T---C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567340  9 -   2598838 TAA-A-CT-----C----T---T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4978  9 -      7103 TAA-A-CT-----C----T---T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5575  9 -     11706 TTA-A-CT-----C----T---T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9312  9 -     30655 TTA-A-CT-----C----T---T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35626  9 +     46564 TTA-A-CT-----C----T---T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95905  9 -     98465 TAA-G-CT-----C----T---T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9544  9 +     35169 TAA-A-CT-----C----T---T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39512  9 +     52041 TGA-T-TT-----C----C---C
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53395  9 -     66298 TAA-A-CT-----C----T---C
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5893  8 -     18639 TAA-A-CT-----T----T----
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 3 C 0
s Pteropus_alecto.KB030862.1                               5842002  9 -  28871421 taa-a-ct-----t----t---c
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538517  9 -   4952924 taa-a-ct-----t----t---c
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100361  9 +  38429054 GAA-A-CT-----T----C---C
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28449  8 +     91421 TAA-A-CT-----G----T----
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154933  8 -   7812017 TAA-A-CT-----G----T----
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9306  8 +     72585 TAA-A-CT-----G----T----
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54818  8 +     55069 TAA-A-CT-----G----T----
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 4
s Rhinolophus_sinicus.LVEH01000134.1                       2915967  9 +   3329780 GAA-A-CT-----T----G---C
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3036  8 +      7119 TAA-A-CT-----G----T----
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123651  8 + 195417433 TAA-A-CT-----G----T----
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237878  8 -   7961872 TAA-A-CT-----G----T----
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76501  9 -    116970 TAA-A-CT-----T----G---C
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                207  4 -      1130 -------T-----C----T---C
i Saguinus_bicolor.k141_2012906                          N 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5104  9 +      6077 TAA-A-CT-----C----T---C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5197  9 +      5971 TCA-A-CT-----C----C---C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5115  9 +      5932 TCA-A-CT-----C----T---C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3460  9 -      4390 TCA-A-CT-----C----T---C
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393222  4 - 209938924 -------T-----C----T---C
i Saguinus_midas.LG03                                    I 383 C 0
s Saguinus_mystax.k141_8077960                                5063  9 +      5979 TCA-A-CT-----C----T---C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1633  9 -     22275 TAA-A-CT-----C----T---C
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9496  8 +     16473 TAA-A-CT-----G----T----
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 4
s Saimiri_boliviensis.NW_024100920.1                       1110229  4 + 121099817 taa-a------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 3
s Saimiri_cassiquiarensis.k141_1467335                       31796  4 -     47369 TAA-A------------------
i Saimiri_cassiquiarensis.k141_1467335                   C 0 I 3
s Saimiri_macrodon.k141_1173117                              32182  4 -     79414 TAA-A------------------
i Saimiri_macrodon.k141_1173117                          C 0 I 3
s Saimiri_oerstedii.k141_245838                              28873  4 -     34454 TAA-A------------------
i Saimiri_oerstedii.k141_245838                          C 0 I 3
s Saimiri_sciureus.k141_1467173                              16274  4 -     22428 TAA-A------------------
i Saimiri_sciureus.k141_1467173                          C 0 I 3
s Saimiri_ustus.k141_360372                                  31428  4 -     47109 TAA-A------------------
i Saimiri_ustus.k141_360372                              C 0 I 3
s Sapajus_apella.ctg103                                     239477  9 +   5703754 TAA-A-CT-----C----T---C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9067  9 +     21866 TAA-A-CT-----C----T---C
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26772  8 +     27374 TAA-A-CT-----C----T----
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30284  8 +     58920 TAA-A-CT-----G----T----
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16782  8 -     45317 TAA-A-CT-----G----T----
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24440  8 -     42441 TAA-A-CT-----G----T----
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27118  8 -     29113 TAA-A-CT-----G----T----
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30193  8 -     48123 TAA-A-CT-----G----T----
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51258  9 +     77746 TAA-A-TT-----C----A---C
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865390  9 -   1910179 TAA-A-GT-----C----T---C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672472  9 +  18376816 TAA-A-CT-----T----T---C
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869600  9 +   3870691 TAA-A-CT-----C----T---C
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7973  9 -     97271 TGA-A-CT-----T----T---C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126133  9 +    196729 TAA-G-CT-----T----T---C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645164 12 +  69701581 TAA-A-CT-----C----TGTAC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392379  9 +   1523678 TAA-A-CT-----C----T---C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15549  9 +     22964 TAA-A-CT-----C----T---C
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3970  4 +      5583 ACA-G------------------
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192848  9 +    199430 TAA-A-CT-----C----T---C
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    106816  9 -    539355 TAA-A-CT-----C----T---C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 3
s Tarsius_lariang.k141_1733899                                1893  9 +      9917 TAA-A-CT-----C----T---C
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8691  9 +     20590 TAA-A-CT-----C----T---C
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25264  7 -     33621 GAA-A-CT-----G---------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20927  4 -     31044 TCA-G------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481394  9 -    610378 TAA-A-CT-----C----T---C
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22317  8 +     26378 TAA-A-CT-----G----T----
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     34993  8 -     78344 TAA-A-CT-----G----T----
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21642  8 +     25722 TAA-A-CT-----G----T----
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30017  8 -     62838 TAA-A-CT-----G----T----
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           29993  8 +     46913 TAA-A-CT-----G----T----
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10800  8 -     28527 TAA-A-CT-----G----T----
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31952  8 -     64340 TAA-A-CT-----G----T----
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29990  8 -     63452 TAA-A-CT-----G----T----
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11437  8 +     22490 TAA-A-CT-----G----T----
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4792  8 -      6147 TAA-A-CT-----G----T----
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11705  8 -     13050 TAA-A-CT-----G----T----
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256935  8 -   6242583 TAA-A-CT-----G----T----
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2963  8 +     19340 TAA-A-CT-----G----T----
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175106  9 -    200418 TAAAA-CT-----A----T----
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 3
s Trichechus_manatus.JH594705.1                            6482782 13 -  10818551 TAA-A-CT-----CATACT---G
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835595  9 -   4065304 TAA-A-CT-----C----T---C
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9616  9 -     70247 TAG-A-CT-----C----T---T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366982  4 -  33153633 ------CT-----G----T----
i Tursiops_truncatus.MRVK01000835.1                      I 3 I 4
s Uropsilus_gracilis.UroGra_scaffold_46687                    4782 14 -     21056 TAA-A-CTTCATAC----T---G
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183331  9 +   5085361 TAA-A-CT-----T----T---C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26486  9 -     30710 TCA-A-CT-----G----T---C
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25393  9 -    147434 TCA-A-CT-----G----T---C
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77526 12 +   5488506 TAA-A-CT-----G----TATAC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106095  9 -    112863 TAA-A-CT-----T----T---C
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175356  9 -    224448 TAA-A-CA-----C----T---C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30326  9 -     86975 TAA-A-CT-----T----T---C
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1170  9 -      1899 TAC-A-CT-----C----A---C
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Galago_senegalensis.k141_991736                            10335  0 +     22493 C
e Galago_moholi.ctg3793                                     126790  0 -    137831 C
e Lepus_americanus.LepAme_scaffold_56121                     19266  0 +     24238 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Theropithecus_gelada.CM009954.1                           354612 59 - 186847797 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955  0 +    313613 C
e Rattus_norvegicus.chr16                                 37024043 457 -  90668790 I
e Papio_ursinus.k141_5784434                                   367 59 -     10386 I
e Papio_papio.k141_3538738                                     407 59 +     10553 I
e Papio_kindae.k141_2214839                                  23736 59 -     27687 I
e Papio_hamadryas.Contig39                                  293831 59 -  20919399 I
e Papio_cynocephalus.k141_1507553                            11088 59 +     21308 I
e Papio_anubis.CM001495.2                                   244803 59 - 183742232 I
e Oryctolagus_cuniculus.CM000791.1                       107105947  0 - 174332312 C
e Mandrillus_sphinx.Contig270                               358625 59 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        323794 59 +  24302211 I
e Macaca_tonkeana.k141_339739                                 4304 59 +     17132 I
e Macaca_thibetana.k99_45532                                  1144 59 -      5049 I
e Macaca_silenus.Contig273                                  272506 59 +    668171 I
e Macaca_siberu.k141_2185972                                 46598 59 +     59329 I
e Macaca_radiata.k141_2139468                                 2657 59 +     14901 I
e Macaca_nigra.k141_2818840                                  50126 59 -     62418 I
e Macaca_nemestrina.KQ007038.1                              400954 59 +  25927173 I
e Macaca_mulatta.NC_041758.1                                416724 59 - 187317192 I
e Macaca_maura.k141_1103459                                  47521 59 +     51645 I
e Macaca_leonina.k141_321385                                 37777 59 -     50087 I
e Macaca_fuscata.k119_546792                                 26601 59 +     30527 I
e Macaca_fascicularis.k141_1617581                            1486 59 -      5035 I
e Macaca_cyclopis.k119_263443                                26648 59 +     30207 I
e Macaca_assamensis.Contig5                                 374380 59 -  60120075 I
e Macaca_arctoides.k141_1757516                              46718 59 -     61512 I
e Lophocebus_aterrimus.ctg367                               335329 59 -   1826925 I
e Jaculus_jaculus.JH725527.1                               1241237  0 +   9596543 C
e Condylura_cristata.JH655891.1                           35808250  0 +  53390261 C
e Cercocebus_torquatus.k141_2159127                          46000 59 -    148725 I
e Cercocebus_lunulatus.k141_2500334                           1616 59 -     14410 I
e Cercocebus_chrysogaster.k141_1522556                       46183 59 +     47900 I
e Cercocebus_atys.KQ010504.1                                142444 59 -   4669795 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6675 7 +     36723 T-AC-T----GC--A
s Acinonyx_jubatus.LLWD01001279.1                           814111 4 +   1699592 -----T----AT--A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27356 7 +     63021 T-GC-T----GT--G
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416566 4 +  29979442 -----t----at--t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216907 4 +    347723 -----t----at--t
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19738 7 -     61208 T-AC-T----GT--A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49321 6 +     53615 --AC-T----GC--A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1352 6 +     13857 --AC-T----GT--A
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17903 6 -     21945 --AC-T----GC--A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19588 6 +     32033 --AC-T----GC--A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73424 7 -     84148 T-AC-T----GC--A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45663 7 -     78289 T-AC-T----GC--A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45102 7 +     55831 T-AC-T----GC--A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43552 7 -     64179 T-AC-T----GC--A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            659 7 -      3959 T-AC-T----GC--A
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42177 7 +     45454 T-AC-T----GC--A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47826 7 +     70886 T-AC-T----GC--A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                              9999 7 +     30854 T-AC-T----GC--A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34133 7 +     42133 T-AC-T----GC--A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586953 4 +   2318259 -----T----GT--A
i Ammotragus_lervia.NIVO01071767.1                       I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178368 7 -    412891 -----TGC-CAT--A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52030 4 -     68529 -----T----GT--A
i Antilocapra_americana.AntAmePen_scaffold_21030         I 4 C 0
s Aotus_azarae.k141_887050                                    2391 7 +     17741 T-AC-T----GC--A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3016 7 -     15923 T-AC-T----GT--A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673298 7 +   5030052 T-AC-T----GT--A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3292 7 -     16391 T-AC-T----GC--A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2851 7 -     17186 T-AC-T----GC--A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17366 7 -     32367 T-AC-T----AC--A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21423 7 -     45910 T-AC-T----GT--A
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6623 7 -     15198 -----TGC-GAT--A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275889 7 +  21539123 T-AC-T----GC--A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12056 7 +     48076 T-AC-T----GC--A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7191 7 -     28759 T-AC-T----GC--A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34746 7 +     44353 T-AC-T----GC--A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50116 7 -     71267 T-AC-T----GC--A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24174 7 -     33135 T-AC-T----GC--A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7455 7 +     11645 T-GC-A----GT--A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7463 7 -     19611 T-GC-A----GT--A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964714 4 -  23207421 -----T----GT--A
i Balaenoptera_acutorostrata.KI537508.1                  I 4 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1214 4 -     25979 -----T----GT--A
i Balaenoptera_bonaerensis.DF411050.1                    I 4 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87959 4 +    124022 -----T----GT--A
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 4 C 0
s Bison_bison.KN261452.1                                     23494 4 +    288883 -----T----GT--A
i Bison_bison.KN261452.1                                 I 4 C 0
s Bos_indicus.CM003047.1                                  20357884 4 +  48749331 -----T----GT--A
i Bos_indicus.CM003047.1                                 I 4 C 0
s Bos_mutus.JH880303.1                                      756448 4 +   1948126 -----T----GT--A
i Bos_mutus.JH880303.1                                   I 4 C 0
s Bos_taurus.CM000203.6                                   27546590 4 -  45695690 -----T----GT--A
i Bos_taurus.CM000203.6                                  I 4 C 0
s Bubalus_bubalis.KI419123.1                               1531598 4 -   4408762 -----T----GT--G
i Bubalus_bubalis.KI419123.1                             I 4 C 0
s Cacajao_ayresi.k141_96119                                   8983 7 +     28062 T-AC-T----GC--A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44277 7 -     91139 T-AC-T----GC--A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21803 7 +     95584 T-AC-T----GC--A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21716 7 +    119600 T-AC-T----GC--A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11371 7 +     18648 T-AC-T----GC--A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10887 7 -     13885 T-AC-T----GC--A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2973 7 -      8861 T-AC-T----GC--A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455365 7 + 189096842 T-AC-T----GC--A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2888 7 +      8664 T-AC-T----GC--A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632204 4 +  17673402 -----T----GT--A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666491 4 +   7040546 -----T----GT--A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210149 4 +   1652518 -----T----GT--A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506470 4 +  60362399 -----T----GT--T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10106 4 -     23171 -----T----GT--T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223449 4 +   9314153 -----T----GT--T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616584 4 +  59632846 -----T----GT--T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108165 4 -  63665305 -----T----GT--T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410682 4 -  46296322 -----T----GT--A
i Capra_aegagrus.CM003241.1                              I 4 C 0
s Capra_hircus.CM004588.1                                 26592956 4 +  44709034 -----T----GT--A
i Capra_hircus.CM004588.1                                I 4 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    697 7 -      1607 T-AC-T----AT--A
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271676 7 +    496798 T-AA-T----AT--A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1493 7 +      9923 -----T-GAGAT--A
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28859 6 -     39886 T--C-T----AT--A
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80779 4 -    217609 -----T----GT--A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997585 7 +  23392119 T-AC-T----GT--G
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001027 7 +  23407841 T-AC-T----GT--G
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64106 7 -     66877 T-AC-T----GT--G
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6286 7 -     12580 T-AC-T----GC--A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44344 7 +     53515 T-AC-T----GC--A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374112 7 -  26074798 T-AC-T----GC--A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9166 7 -     34880 T-AC-T----GC--A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68262 7 -     89041 T-AC-T----GC--A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3637 7 -      5494 T-AA-T----AT--A
i Cephalopachus_bancanus.k141_1689090                    I 3 C 0
s Ceratotherium_simum.JH767749.1                          15493398 4 -  27778364 -----T----GT--A
i Ceratotherium_simum.JH767749.1                         I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20231 4 +     27315 -----T----GT--A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 4 C 0
s Cercopithecus_ascanius.k141_3120866                        28235 6 -     40656 --AC-T----GC--A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8199 6 +     20796 --AC-T----GC--A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13317 6 -     17524 --AC-T----GC--A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29040 6 -     34525 --AC-T----GC--A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12820 6 -     25376 --AC-T----GC--A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365407 6 -  39242232 --AC-T----GC--A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271134 6 +  21565898 --AC-T----GC--A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33502 6 -     45857 --AC-T----GC--A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28403 6 -     32606 --AC-T----GC--A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4565 6 +      8499 --AC-T----GC--A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26961 6 +     70610 --AC-T----GC--A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23922 6 +     36323 --AC-T----AC--A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13848 1 -     19938 -----C---------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31828 7 -     33796 T-AC-A----GT--G
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6342 7 -     15404 T-AC-A----GT--G
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10091 7 -     32913 T-AC-T----GC--A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20504 7 -     40346 T-AC-T----GC--A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20759 7 +    216457 T-AC-T----GC--A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20548 7 +     39636 T-AC-T----GC--A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239916 7 -   2543920 T-AC-T----GT--A
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            211 7 +      1057 T-AC-T----GC--A
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43614 7 -    112038 T-AC-T----GC--A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9165 7 +     34062 T-AC-T----GC--A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344823 6 +  18827391 --AC-T----GC--A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11365 6 -     44032 --AC-T----GC--A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306148 6 - 135778131 --AC-T----GC--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                   95 1 +     10270 -----C---------
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607571 1 -    839153 -----C---------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_4313612                 0 5 +       302 T-AGCT---------
i Chrysochloris_asiatica.ChrAsi_scaffold_4313612         n 101 C 0
s Colobus_angolensis.KN981557.1                             410554 6 -   2368649 --AC-T----GT--A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380435 6 - 200372422 --AC-T----GT--A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3992 6 -     84244 --AC-T----GT--A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3968 7 -      8242 -----TAC-TAT--A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46052 5 -     83289 T-GC-T----A----
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117728 7 - 224834208 T-GC-T----AT--A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10988 2 +     12657 -----------T--A
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5558 4 +     87169 -----T----AC--T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646597 1 -   1526836 --------------A
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19766 7 +     50838 T-TC-T----GT--A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5496 7 +     36344 T-GC-T----GT--G
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29280 7 +     75252 T-AC-T----GC--G
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111201 1 -   2246927 -----c---------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293749 7 +  12879189 T-AT-A----GT--A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633120 4 -  35494412 -----T----GT--A
i Delphinapterus_leucas.KZ290073.1                       I 6 C 0
s Desmodus_rotundus.KZ672289.1                            11866486 3 -  20541912 ----------AT--A
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665671 4 -   1390856 -----T----GT--A
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140470 4 -    198055 -----T----GT--A
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 C 0
s Dinomys_branickii.DinBra_scaffold_10381                    99995 7 -    115145 T-AC-G----GT--A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951759 7 -  37912305 T-CC-T----GT--A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6693 7 -     10735 T-CC-T----GT--A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856718 4 - 111700974 C-AG-C---------
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7461 7 +     19438 -----TAC-TGT--A
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241307 4 -    607251 -----T----GT--a
i Elaphurus_davidianus.JRFZ01104969.1                    I 4 C 0
s Elephantulus_edwardii.JH947257.1                         1226937 3 +  10337057 c-ag-----------
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33582 7 +    110024 T-GC-T----AC--A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15580 7 +     18970 T-GC-T----AT--A
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 5
s Enhydra_lutris.KZ291758.1                               24917307 4 +  41312741 -----t----at--t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580075 7 +  14770903 -----TAC-tat--a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042615 4 -   4378816 -----a----gt--a
i Equus_asinus.JREZ01000139.1                            I 18 C 0
s Equus_caballus.CM000403.2                               21376553 4 +  39960074 -----A----GT--A
i Equus_caballus.CM000403.2                              I 18 C 0
s Equus_przewalskii.KK951119.1                              412535 4 -    498745 -----a----gt--a
i Equus_przewalskii.KK951119.1                           I 18 C 0
s Erinaceus_europaeus.JH835339.1                           3667348 4 +   7059049 -----------TAGA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264359 6 +  21539334 --AC-T----GC--A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72328 4 -    133382 -----T----GT--A
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 4 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114                41 4 +     25849 -----T----GT--A
i Eubalaena_japonica.EubJap_flattened_line_57114         I 4 C 0
s Eulemur_albifrons.k141_51491                               15969 7 -     24895 T-AC-A----GT--A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43679 7 -     70999 T-AC-A----GT--A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87649 7 +    112731 T-AC-A----GT--A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44212 7 +     68309 T-AC-A----GT--A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54536 7 -     65740 T-AC-A----GT--A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25169 7 -     75513 T-AC-A----GT--A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49363 7 -     97555 T-AC-A----GT--A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6087 7 +     30972 T-AC-A----GT--A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43807 7 -     52037 T-AC-A----GT--A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60210 7 -    111500 T-AC-A----GT--A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248021 4 - 206538554 -----T----AT--A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117807 4 - 205367284 -----T----at--a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28904 4 -     30238 -----T----AT--T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923134 7 -   3816255 T-AC-T----GC--A
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126790 4 -    137831 -----C----GT--A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10335 4 +     22493 -----C----GT--A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22415 7 -     32986 T-AC-T----GT--A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2355 7 -     28519 C-AC-T----GT--A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 I 3
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93027 4 -     95226 -----T----GT--A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 4 C 0
s Glis_glis.GliGli_scaffold_163929                            2493 7 -      6791 T-GC-C----AT--A
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6984 7 -      8343 T-AC-T----GT--A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255991 7 - 186649187 T-AC-T----GT--A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3559 7 -     78134 T-AC-C----AT--A
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Hapalemur_alaotrensis.k141_330369                          15894 7 -     40692 T-AC-A----GT--A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37293 7 +     49394 T-AT-A----GT--A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62164 7 -     66874 T-AC-A----GT--A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11035 7 -     42923 T-AT-A----GT--A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18037 7 -     53142 T-AC-A----GT--A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31991 4 -    327341 -----T----AT--T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10694 3 +     48891 ----------GT--A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933553 4 -  22651954 T-AC-T---------
i Heterocephalus_glaber.JH602082.1                       C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1430 4 +      8654 T-AA-C---------
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8834 4 -     36432 -----T----GC--T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 4 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552811 7 -   1711038 -----TAC-TGT--A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2249 6 -      2730 -----TAC-T-T--A
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143991 7 -    630532 T-AC-T----GC--A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71369 4 +     83186 -----T----AT--T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72984 7 +    143317 T-AC-T----GT--A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7036 7 +     12352 T-AC-T----GC--A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14220 7 +     55766 T-AC-T----GC--A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053820 7 + 191637585 T-AC-T----GC--A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802698 7 +  11177569 T-AC-T----GC--A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8306 7 -    135385 T-AC-T----GT--A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388031 7 +   7955117 T-AC-T----GC--A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3598 7 +     11955 T-AC-A----GT--A
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11223 4 -     16823 -----T----GT--A
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 4 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73063 4 -     97402 -----T----GT--A
i Kogia_breviceps.KogBre_flattened_line_3970             I 8 C 0
s Lagothrix_lagothricha.k141_246028                          44440 7 +    110728 T-AC-T----GC--A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64373 7 -     65777 -----CAC-TGT--A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760691 7 +  30322482 T-AC-A----GT--A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5347 7 -     13097 T-AC-T----GC--A
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5101 7 +      5940 T-AC-T----GC--A
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4924 7 -      5717 T-AC-T----GC--A
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11310 7 -     11567 T-AA-G----GC--A
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12691 7 -     12945 T-AA-G----GC--A
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10203 7 +     29618 T-AC-A----GT--A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10199 7 +     31569 T-AC-A----GT--A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10209 7 +     24756 T-AC-A----GT--A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10209 7 +     16388 T-AC-A----GT--A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814697 4 -   3914936 -----T----at--t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342408 4 +    662738 -----T----GT--A
i Lipotes_vexillifer.KE559953.1                          I 4 C 0
s Loris_lydekkerianus.k141_2031736                           12499 7 +     19643 T-AC-T----GT--A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046169 7 -   6120653 T-AC-T----GT--A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086100 4 +  43346337 C-ag-c---------
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615739 4 +  59628241 -----T----GT--T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224439 7 -    270270 -----TAC-TGT--A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Manis_javanica.JSZB01003497.1                             674735 7 -    737560 -----TGC-TGT--G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222035 7 +    317179 -----TGC-TGT--G
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502245 7 +  40650429 T-AC-T----GC--A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151594 7 +    207569 -----TAC-TGT--A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27422 4 -     74585 -----T----AT--T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 51998 7 -    140813 T-GC-A----GT--G
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88692 4 +     93471 -----T----GT--A
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 4 C 0
s Mico_argentatus.k141_582562                                11473 3 +     17804 ----------GC--A
i Mico_argentatus.k141_582562                            I 1 C 0
s Mico_humeralifer.k141_1180625                              11973 3 -     12984 ----------GC--A
i Mico_humeralifer.k141_1180625                          I 1 C 0
s Mesocricetus_auratus.KB708134.1                         17431707 2 +  29670104 T-G------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 5
s Mico_schneideri.k141_1877700                                     20288 7 -     26561 T-AC-T----GC--A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986041 7 +  93316391 T-AC-A----GT--G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47891 4 +    145209 C-AG-C---------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186278 7 +    200668 -----T-GTGAT--A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965031 7 +  27267610 T-GC-T----AT--A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364427 6 -   8254450 -----TAC-T-T--A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43334 6 -     48117 -----TAC-T-T--A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23854 6 -     27822 --AC-T----GC--A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9708 4 +     27589 -----T----AT--T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53823 7 -     62432 T-AT-A----GT--G
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360797 4 +    437263 -----T----GT--A
i Monodon_monoceros.MonMon_M_scaffold_103                I 4 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180513 7 +    366855 -----TAC-TAT--A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27135 4 -     82753 -----T----GT--A
i Moschus_moschiferus.MosMos_scaffold_13123              I 4 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19725 4 -     63510 -----T----AT--T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40355 7 +     47283 -----TA-TTGC--A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596201 7 + 120012414 G-CC-T----GT--A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689398 7 + 129401213 T-CC-T----GT--A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217740 7 +  89631738 T-CC-T----GT--A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498683 7 + 130317789 T-CC-T----GT--A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85400 7 -     86153 T-AC-C----AT--A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356328 4 +  14710649 -----T----at--t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64281 7 +     67721 C-AC-T----AC--A
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794633 7 +  10118263 -----TAC-tga--a
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                4388807 7 +   6019432 -----TAC-tgc--a
i Myotis_davidii.KB100139.1                              I 1 C 0
s Myotis_lucifugus.GL429869.1                               384833 7 +   4330536 -----TAC-Tgc--a
i Myotis_lucifugus.GL429869.1                            I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3627 7 +     18357 -----TAC-TGC--A
i Myotis_myotis.MyoMyo_scaffold_66571                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120982 1 +    130748 -----C---------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947904 7 +   3037898 T-AC-T----GT--A
i Nannospalax_galili.KL204047.1                          I 1 C 0
s Nasalis_larvatus.k141_1350636                              30579 6 +     34575 --AC-T----GT--A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233463 4 -   7148211 -----T----GT--A
i Neophocaena_asiaeorientalis.KZ687982.1                 I 4 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129122 8 -    149072 -----TACAAAT--A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54922 7 -    132029 T-AC-T----GC--A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11017 7 -     16345 T-AC-T----GC--A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16902 7 +     22201 T-AC-T----GC--A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415123 7 -  22158432 T-AC-T----GC--A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27300 7 -     54323 T-AC-T----GC--A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199338 4 +   9404916 -----T----GT--T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639396 7 + 196305487 T-AC-T----GT--A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             1999 7 -      9413 T-AC-T----GT--A
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566779 7 - 199412804 T-AC-T----GT--A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558086 7 -   3988456 C-AT-T----GT--G
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056371 7 -  11899542 T-AG-T----GT--A
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453123 4 +   2017862 -----T----AT--T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437915 4 -    630418 -----T----GT--A
i Odocoileus_virginianus.KZ100018.1                      I 4 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16109 4 +    150152 -----T----GT--A
i Okapia_johnstoni.LVCL01S0005463.1                      I 4 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95704 7 -    140218 T-GC-T----AT--A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6247 7 -     41509 T-GC-T----AG--A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103865 4 +  10937097 -----T----GT--A
i Orcinus_orca.KB316932.1                                I 4 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1163 4 +     11607 T-AA-G---------
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40381 4 +    559221 -----t----gt--t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41947 7 -     51505 T-AC-T----GT--A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354951 7 +   1103335 T-AC-T----GT--A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405820 4 -  44047080 -----T----GT--A
i Ovis_aries.CM001607.2                                  I 4 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6339 4 +     17875 -----T----GT--A
i Ovis_canadensis.OviCan_scaffold_67953                  I 4 C 0
s Pan_troglodytes.NBAG03003091.1                             13707 8 -     26668 TAAC-T----GC--A
i Pan_troglodytes.NBAG03003091.1                         I 9 I 1653
s Panthera_onca.PanOnc_flattened_line_3271                   25727 4 -    230217 -----T----AT--T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463053 4 -  18783137 -----T----AT--T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973712 4 +   8748460 -----T----AT--T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617345 4 +   2937107 -----T----GT--A
i Pantholops_hodgsonii.KE114653.1                        I 4 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16307 4 +     78924 -----T----AT--A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28278 7 +     31479 T-TC-T----GT--A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20646 7 -     24908 T-TC-T----GT--A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3101 7 +      9367 T-CC-T----GT--A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249470 7 +  18517816 T-GC-T----AG--A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33115 7 -     56120 T-AC-T----GT--A
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5391 4 -     63832 -----T----GT--A
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 4 C 0
s Piliocolobus_badius.k141_2704958                            3942 6 +     55023 --AC-T----GC--A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3480 6 -     89929 --AC-T----GC--A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4070 6 +     40849 --AC-T----GC--A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255745 6 +  14605196 --AC-T----GC--A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5213 7 +     22231 -----TAC-TGT--T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65982 7 +    207309 T-AT-T----GC--A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7070 7 -     25401 T-AC-T----GC--A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32818 7 +     58159 T-AT-T----GC--A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33094 7 +     63561 T-AT-T----GC--A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32854 7 +     51148 T-AT-T----GC--A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557824 7 -   4542175 T-AC-T----GC--A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32838 7 +     51125 T-AT-T----GC--A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2408 4 +     19503 -----T----GT--A
i Platanista_gangetica.PlaMin_flattened_line_83166       I 4 C 0
s Plecturocebus_bernhardi.k141_2549090                        9256 7 +     39866 T-AC-T----GC--A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4338 7 -      9282 T-AC-T----GC--A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43742 7 -     87950 T-AC-T----GC--A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44136 7 -     88961 T-AC-T----GC--A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8834 7 -     39403 T-AC-T----GC--A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43785 7 +     87928 T-AC-T----GC--A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8833 7 -     60166 T-AC-T----GC--A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15770 7 -     67232 T-AC-T----GC--A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43686 7 -     90634 T-AC-T----GC--A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45153 7 +     89403 T-AC-T----GC--A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179132 7 - 189387572 T-AC-T----GC--A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193949 7 -   9816681 T-AC-T----GC--A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29090 6 +     69807 --AC-T----GC--A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46271 6 -     80239 --AC-T----GC--A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5421 4 +      7663 T-AG-C---------
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983839 7 +   4620579 T-AC-A----GT--A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567349 7 -   2598838 T-AC-A----GT--A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4987 7 -      7103 T-AC-A----GT--A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5584 7 -     11706 C-AC-A----GT--A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9321 7 -     30655 C-AC-A----GT--A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35635 7 +     46564 C-AC-A----GT--A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95914 7 -     98465 T-AC-A----GT--A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9553 7 +     35169 T-AC-A----GT--A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39521 7 +     52041 T-GC-A----GT--G
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53404 7 -     66298 -----TAC-TAT--A
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5901 3 -     18639 ----------GT--T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842011 7 -  28871421 -----t-actgt--a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538526 7 -   4952924 -----t-actgt--a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100370 4 +  38429054 -----T----AT--A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28457 6 +     91421 --AC-T----GC--A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154941 6 -   7812017 --AC-T----GC--A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9314 6 +     72585 --AC-T----GC--A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54830 4 +     55069 -----T----AT--A
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 4 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915976 7 +   3329780 -----TAC-TGT--A
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3044 6 +      7119 --AC-T----GC--A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123659 6 + 195417433 --AC-T----GC--a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237886 6 -   7961872 --AC-T----GC--A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76510 7 -    116970 -----TAC-TGT--A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                211 7 -      1130 T-AC-T----GC--A
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5113 7 +      6077 T-AC-T----GC--A
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5206 7 +      5971 T-AC-T----GC--A
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5124 7 +      5932 T-AC-T----GC--A
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3469 7 -      4390 T-AC-T----GC--A
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393226 7 - 209938924 T-AC-T----GC--A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5072 7 +      5979 T-AC-T----GC--A
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1642 7 -     22275 T-AC-T----GC--A
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9508 4 +     16473 -----T----GT--A
i Saiga_tatarica.SaiTat_scaffold_39512                   I 4 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110236 7 + 121099817 T-AC-T----GC--A
i Saimiri_boliviensis.NW_024100920.1                     I 3 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31803 7 -     47369 T-AC-T----GC--A
i Saimiri_cassiquiarensis.k141_1467335                   I 3 C 0
s Saimiri_macrodon.k141_1173117                              32189 7 -     79414 T-AC-T----GC--A
i Saimiri_macrodon.k141_1173117                          I 3 C 0
s Saimiri_oerstedii.k141_245838                              28880 7 -     34454 T-AC-T----GC--A
i Saimiri_oerstedii.k141_245838                          I 3 C 0
s Saimiri_sciureus.k141_1467173                              16281 7 -     22428 T-AC-T----GC--A
i Saimiri_sciureus.k141_1467173                          I 3 C 0
s Saimiri_ustus.k141_360372                                  31435 7 -     47109 T-AC-T----GC--A
i Saimiri_ustus.k141_360372                              I 3 C 0
s Sapajus_apella.ctg103                                     239486 7 +   5703754 T-AC-T----GC--A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9076 7 +     21866 T-AC-T----GC--A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26780 6 +     27374 --AC-T----GC--A
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30292 6 +     58920 --AC-T----GC--A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16790 6 -     45317 --AC-T----GC--A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24448 6 -     42441 --AC-T----GC--A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27126 6 -     29113 --AC-T----GC--A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30201 6 -     48123 --AC-T----GC--A
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51267 7 +     77746 T-GC-A----AG--A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865399 2 -   1910179 -----------T--A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672481 2 +  18376816 -----------T--A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869609 7 +   3870691 T-AC-T----GC--A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7982 4 -     97271 -----A----AT--T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126142 4 +    196729 -----T----AT--T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645176 4 +  69701581 -----T----GT--A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392388 7 +   1523678 T-AC-T----GC--A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15558 7 +     22964 -----TAC-TGT--A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3974 1 +      5583 -----C---------
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192860 4 +    199430 -----T----GG--A
i Tapirus_indicus.TapInd_scaffold_7432                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106828 4 -    539355 -----T----GG--A
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 C 0
s Tarsius_lariang.k141_1733899                                1902 7 +      9917 T-AA-T----AT--A
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8700 7 +     20590 T-AA-T----AT--A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25271 7 -     33621 T-AC-T----GT--A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20931 1 -     31044 -----C---------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481403 7 -    610378 -----TGC-GAT--A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22325 6 +     26378 --AC-T----GT--A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35001 6 -     78344 --AC-T----GC--A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21650 6 +     25722 --AC-T----GT--A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30025 6 -     62838 --AC-T----GT--A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30001 6 +     46913 --AC-T----GC--A
i Trachypithecus_geei.k141_1001272                       C 0 I 68
s Trachypithecus_germaini.k141_57262                         10808 6 -     28527 --AC-T----GT--A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31960 6 -     64340 --AC-T----GT--A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          29998 6 -     63452 --AC-T----GT--A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11445 6 +     22490 --AC-T----GT--A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4800 6 -      6147 --AC-T----GC--A
i Trachypithecus_melamera.k141_591572                    C 0 I 68
s Trachypithecus_obscurus.k141_848057                        11713 6 -     13050 --AC-T----GC--A
i Trachypithecus_obscurus.k141_848057                    C 0 I 68
s Trachypithecus_phayrei.ctg124                             256943 6 -   6242583 --AC-T----GT--A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        2971 6 +     19340 --AC-T----GC--A
i Trachypithecus_pileatus.k141_2622778                   C 0 I 68
s Tragulus_javanicus.TraJav_scaffold_3462                   175118 4 -    200418 -----T----GT--A
i Tragulus_javanicus.TraJav_scaffold_3462                I 3 C 0
s Trichechus_manatus.JH594705.1                            6482795 4 -  10818551 C-AG-C---------
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835604 7 -   4065304 T-AC-T----GT--A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9625 7 -     70247 T-GC-G----GT--A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366990 4 -  33153633 -----T----GT--A
i Tursiops_truncatus.MRVK01000835.1                      I 4 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4796 2 -     21056 -----------C--A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183340 4 +   5085361 -----t----at--t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26495 7 -     30710 T-AC-A----GT--A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25402 7 -    147434 T-AC-A----GT--A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77538 4 +   5488506 -----T----GT--A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106104 4 -    112863 -----T----GT--T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175365 7 -    224448 T-AC-T----GC--A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30335 4 -     86975 -----T----AT--T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1179 7 -      1899 G-AC-T----GT--A
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19266 0 +     24238 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Theropithecus_gelada.CM009954.1                           354612 59 - 186847797 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955 0 +    313613 C
e Rattus_norvegicus.chr16                                 37024043 457 -  90668790 I
e Papio_ursinus.k141_5784434                                   367 59 -     10386 I
e Papio_papio.k141_3538738                                     407 59 +     10553 I
e Papio_kindae.k141_2214839                                  23736 59 -     27687 I
e Papio_hamadryas.Contig39                                  293831 59 -  20919399 I
e Papio_cynocephalus.k141_1507553                            11088 59 +     21308 I
e Papio_anubis.CM001495.2                                   244803 59 - 183742232 I
e Oryctolagus_cuniculus.CM000791.1                       107105947 0 - 174332312 C
e Mandrillus_sphinx.Contig270                               358625 59 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        323794 59 +  24302211 I
e Macaca_tonkeana.k141_339739                                 4304 59 +     17132 I
e Macaca_thibetana.k99_45532                                  1144 59 -      5049 I
e Macaca_silenus.Contig273                                  272506 59 +    668171 I
e Macaca_siberu.k141_2185972                                 46598 59 +     59329 I
e Macaca_radiata.k141_2139468                                 2657 59 +     14901 I
e Macaca_nigra.k141_2818840                                  50126 59 -     62418 I
e Macaca_nemestrina.KQ007038.1                              400954 59 +  25927173 I
e Macaca_mulatta.NC_041758.1                                416724 59 - 187317192 I
e Macaca_maura.k141_1103459                                  47521 59 +     51645 I
e Macaca_leonina.k141_321385                                 37777 59 -     50087 I
e Macaca_fuscata.k119_546792                                 26601 59 +     30527 I
e Macaca_fascicularis.k141_1617581                            1486 59 -      5035 I
e Macaca_cyclopis.k119_263443                                26648 59 +     30207 I
e Macaca_assamensis.Contig5                                 374380 59 -  60120075 I
e Macaca_arctoides.k141_1757516                              46718 59 -     61512 I
e Lophocebus_aterrimus.ctg367                               335329 59 -   1826925 I
e Jaculus_jaculus.JH725527.1                               1241237 0 +   9596543 C
e Condylura_cristata.JH655891.1                           35808250 0 +  53390261 C
e Cercocebus_torquatus.k141_2159127                          46000 59 -    148725 I
e Cercocebus_lunulatus.k141_2500334                           1616 59 -     14410 I
e Cercocebus_chrysogaster.k141_1522556                       46183 59 +     47900 I
e Cercocebus_atys.KQ010504.1                                142444 59 -   4669795 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6682 11 +     36723 GC--A---A---CTAA------------T-----G----A
s Acinonyx_jubatus.LLWD01001279.1                           814115  8 +   1699592 AT--A---A---C---------------T-----a----a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27363 14 +     63021 GC--T---A---ACAC------------TAT-T-G----A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416570  8 +  29979442 at--a---a---g---------------t-----a----a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216911  8 +    347723 at--a---a---a---------------t-----a----a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19745 11 -     61208 GC--A---T---GTGA------------T-----C----A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49327 11 +     53615 GC--A---A---CTAA------------T-----A----A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1358 11 +     13857 GC--A---A---CTAG------------T-----A----A
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17909 11 -     21945 GC--A---A---CTAG------------T-----A----A
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19594 11 +     32033 GC--A---A---CTAG------------T-----A----A
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73431 11 -     84148 GC--A---A---CTAA------------T-----A----G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45670 11 -     78289 GC--A---A---CTAA------------T-----A----G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45109 11 +     55831 GC--A---A---CTAA------------T-----A----G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43559 11 -     64179 GC--A---A---CTAA------------T-----A----G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            666 11 -      3959 GC--A---A---CTAA------------T-----A----G
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42184 11 +     45454 GC--A---A---CTAA------------T-----A----G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47833 11 +     70886 GC--A---A---CTAA------------T-----A----G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10006 11 +     30854 GC--A---A---CTAA------------T-----A----G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34140 11 +     42133 GC--A---A---CTAA------------T-----A----G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586957  8 +   2318259 GC--A---A---C---------------T-----C----A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178375  8 -    412891 AA--A---A---C---------------T-----A----A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52034  8 -     68529 GC--G---A---C---------------T-----A----A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2398 11 +     17741 GC--A---A---CTAA------------T-----C----G
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3023 11 -     15923 GC--A---A---CTAA------------T-----C----G
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673305 11 +   5030052 GC--A---A---CTAA------------t-----c----g
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3299 11 -     16391 GC--A---A---CTAA------------T-----C----G
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2858 11 -     17186 GC--A---A---CTAA------------T-----C----G
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17373 11 -     32367 GC--A---A---CAAA------------T-----A----A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21430 11 -     45910 AA--A---C---CTAA------------T-----A----A
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6630  8 -     15198 GC--A---A---C---------------T-----A----A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275896 11 +  21539123 GC--A---A---CTAA------------T-----G----G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12063 11 +     48076 GC--A---A---CTAA------------T-----A----G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7198 11 -     28759 GC--A---A---CTAA------------T-----A----G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34753 11 +     44353 GC--A---A---CTAA------------T-----G----G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50123 11 -     71267 GC--A---A---CTAA------------T-----A----G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24181 11 -     33135 GC--A---A---CTAA------------T-----A----G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7462 11 +     11645 AC--A---A---CTAA------------T-----G----A
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7470 11 -     19611 AC--A---A---CTAA------------T-----G----A
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964718  8 -  23207421 AC--A---A---C---------------T-----C----A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1218  8 -     25979 AC--A---A---C---------------T-----C----A
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87963  8 +    124022 GC--A---A---C---------------T-----A----A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23498  8 +    288883 GC--A---A---C---------------T-----A----A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357888  8 +  48749331 GC--A---A---C---------------T-----A----A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756452  8 +   1948126 GC--A---A---C---------------T-----A----A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546594  8 -  45695690 GC--A---A---C---------------T-----A----A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531602  8 -   4408762 GC--A---A---C---------------T-----A----A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   8990 11 +     28062 GC--A---A---GTAA------------T-----A----G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44284 11 -     91139 GC--A---A---GTAA------------T-----A----G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21810 11 +     95584 GC--A---A---GTAA------------T-----A----G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21723 11 +    119600 GC--A---A---GTAA------------T-----A----G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11378 11 +     18648 GC--T---A---CTAA------------T-----A----G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10894 11 -     13885 GC--A---A---CTAA------------T-----A----G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2980 11 -      8861 GC--A---A---CTAA------------T-----A----G
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455372 11 + 189096842 GC--A---A---CTAA------------T-----A----G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2895 11 +      8664 GC--A---A---CTAA------------T-----A----G
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632208  8 +  17673402 GC--A---A---C---------------T-----A----A
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666495  8 +   7040546 GC--A---A---C---------------T-----A----A
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210153  8 +   1652518 GC--A---A---C---------------T-----A----A
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506474  1 +  60362399 ---------------------------------------A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10110  1 -     23171 ---------------------------------------A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223453  1 +   9314153 ---------------------------------------A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616588  1 +  59632846 ---------------------------------------A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108169  1 -  63665305 ---------------------------------------A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410686  8 -  46296322 GC--A---A---C---------------T-----A----A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592960  8 +  44709034 GC--A---A---C---------------T-----A----A
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    704  7 -      1607 GC--A---A---CTA-------------------------
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271683  7 +    496798 GC--A---A---gcc-------------------------
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_107871               1500  8 +      9923 GC--A---G---C---------------T-----A----A
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28865 11 -     39886 GC--A---A---TTAA------------C-----A----G
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80783  8 -    217609 GC--A---A---C---------------T-----A----A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997592 11 +  23392119 GC--A---A---ctaa------------g-----a----a
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001034 11 +  23407841 GC--A---A---ctaa------------g-----a----a
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64113 11 -     66877 GC--A---A---CTAA------------G-----A----A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6293 11 -     12580 GC--T---A---CTAA------------T-----A----G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44351 11 +     53515 GC--T---A---CTAA------------T-----A----G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374119 11 -  26074798 GA--A---A---CTAA------------T-----A----C
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9173 11 -     34880 GA--A---A---CTAA------------T-----A----C
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68269 11 -     89041 GA--A---A---CTAA------------T-----A----C
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3644  7 -      5494 GC--A---A---GTC-------------------------
i Cephalopachus_bancanus.k141_1689090                    C 0 I 1
s Ceratotherium_simum.JH767749.1                          15493402  8 -  27778364 GC--a---a---c---------------t-----a----g
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20235  8 +     27315 GC--A---A---C---------------T-----A----G
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28241 11 -     40656 GC--A---A---CTAA------------T-----A----A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8205 11 +     20796 GC--A---A---CTAA------------T-----A----A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13323 11 -     17524 GC--A---A---CTAA------------T-----A----A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29046 11 -     34525 GC--A---A---CTAA------------T-----A----A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12826 11 -     25376 GC--A---A---CTAA------------T-----A----A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365413 11 -  39242232 GC--A---A---CTAA------------T-----A----A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271140 11 +  21565898 GC--A---A---CTAA------------T-----A----A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33508 11 -     45857 GC--A---A---CTAA------------T-----A----A
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28409 11 -     32606 GC--A---A---CTAA------------T-----A----A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4571 11 +      8499 GC--A---A---CTAA------------T-----A----A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26967 11 +     70610 GC--A---A---CTAA------------T-----A----A
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23928 11 +     36323 GC--A---A---CTAA------------T-----A----A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13849  6 -     19938 -------------AAA------------C-----A----A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31835 11 -     33796 AC--A---A---CTAA------------T-----A----A
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6349 11 -     15404 AC--A---A---CTAA------------T-----A----A
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10098 11 -     32913 GC--A---G---CTAA------------T-----A----G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20511 11 -     40346 GC--A---G---CTAA------------T-----A----G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20766 11 +    216457 GC--A---G---CTAA------------T-----A----G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20555 11 +     39636 GC--A---G---CTAA------------T-----A----G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239923 11 -   2543920 GC--A---A---Ctaa------------g-----a----a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            218 11 +      1057 GC--A---A---CTAA------------T-----A----G
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43621 11 -    112038 GC--G---A---CTAA------------T-----G----G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9172 11 +     34062 GC--G---A---CTAA------------T-----A----G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344829 11 +  18827391 GC--A---A---CTAA------------T-----A----A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11371 11 -     44032 GC--A---A---CTAA------------T-----A----A
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306154 11 - 135778131 GC--a---a---ctaa------------t-----a----a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                   96  6 +     10270 -------------AAA------------C-----A----A
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607572  6 -    839153 -------------AAA------------C-----A----A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_4313612                 5  6 +       302 -------------CAA------------T-----A----A
i Chrysochloris_asiatica.ChrAsi_scaffold_4313612         C 0 C 0
s Colobus_angolensis.KN981557.1                             410560 11 -   2368649 gc--a---a---ctaa------------t-----a----a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380441 11 - 200372422 GC--A---A---CTAA------------T-----A----A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               3998 11 -     84244 GC--A---A---CTAA------------T-----A----A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3975  8 -      8242 GC--A---A---A---------------T-----A----A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117735 14 - 224834208 AC--T---A---ATGC------------TAC-T-T----A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              10990 14 +     12657 CTATA---A---C---AAT-A-------T-----A----C
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5562  8 +     87169 AT--A---A---C---------------TA----A-----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646598 11 -   1526836 GT--A---A---TTAA------------T-----A----A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19773  7 +     50838 GC--A---A---CTA-------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 6
s Cuniculus_paca.CunPac_flattened_line_7025                   5503 11 +     36344 GC--A---A---ATAA------------G-----A----A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29287 11 +     75252 GC--A---A---CTAA------------G-----A----A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111202  6 -   2246927 -------------aaa------------c-----a----a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293756 11 +  12879189 AC--A---A---TTAA------------T-----A----A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633124  8 -  35494412 AC--A---A---C---------------T-----C----A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866489  8 -  20541912 GC--A---A---C---------------T-----A----C
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665675  8 -   1390856 GC--a---a---c---------------t-----a----g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140474  8 -    198055 GC--A---A---C---------------T-----A----G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100002 10 -    115145 GC--A---A---CCGA------------G-----A-----
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951766 11 -  37912305 AC--A---G---CTAA------------T-----A----A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6700 11 -     10735 AC--A---G---CTAA------------T-----A----A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856722  6 - 111700974 -------------AAA------------T-----A----G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7468  8 +     19438 Gc--a---a---c---------------t-----a----g
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241311  8 -    607251 gc--a---a---c---------------t-----a----a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226940  6 +  10337057 -------------caa------------t-----a----a
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33589 14 +    110024 GT--T---A---ATAC------------TAC-T-G----T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15592 14 +     18970 GT--T---A---ATAC------------TAC-T-G----A
i Ellobius_talpinus.LOJH01026522.1                       I 5 C 0
s Enhydra_lutris.KZ291758.1                               24917311 11 +  41312741 at--a---agtaa---------------t-----a----a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580082  8 +  14770903 gc--a---a---a---------------t-----a----a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042619  8 -   4378816 gt--a---a---c---------------t-----a----a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376557  8 +  39960074 Gt--a---a---c---------------t-----a----a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412539  8 -    498745 gt--a---a---c---------------t-----a----a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667352 11 +   7059049 GC--ACATA---A---------------T-----A----A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264365 11 +  21539334 GC--A---A---CTAA------------T-----A----A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72332  8 -    133382 AC--A---A---C---------------T-----C----A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114                45  8 +     25849 AC--A---A---C---------------T-----C----A
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               15976 11 -     24895 AC--A---A---CTAA------------T-----A----A
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43686 11 -     70999 AC--A---A---CTAA------------T-----A----A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87656 11 +    112731 AC--T---A---CTAC------------T-----A----A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44219 11 +     68309 AC--A---A---CTAA------------T-----A----A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54543 11 -     65740 AC--A---A---CTAA------------T-----A----A
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25176 11 -     75513 AC--A---A---CTAA------------T-----A----A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49370 11 -     97555 AC--A---A---CTAA------------T-----A----A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6094 11 +     30972 AC--A---A---CTAA------------T-----A----A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43814 11 -     52037 AC--A---A---CTAA------------T-----A----A
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60217 11 -    111500 AC--A---A---CTAA------------T-----A----A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248025  8 - 206538554 AT--A---A---C---------------T-----a----a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117811  8 - 205367284 at--a---a---c---------------t-----a----a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28908 11 -     30238 AT--A---A---C-----T-AA------T-----A----A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923141 11 -   3816255 GC--A---A---CTaa------------g-----c----a
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126794 11 -    137831 AC--A---C---CTAA------------T-----A----A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10339 11 +     22493 AC--A---C---CTAA------------T-----A----A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22422 11 -     32986 AC--A---C---CTAA------------G-----A----A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2365  5 -     28519 --------------AG------------T-----A----A
i Galeopterus_variegatus.GalVar_scaffold_51812           I 3 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93031  8 -     95226 GC--A---A---C---------------T-----A----A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2500 11 -      6791 GC--A---A---TTAT------------T-----A----A
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               6991 11 -      8343 GC--A---A---CTAA------------T-----G----A
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                255998 11 - 186649187 GC--A---A---ctaa------------t-----g----a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3566 11 -     78134 AC--A---G---CTAT------------T-----A----A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15901 11 -     40692 AC--A---A---CTAA------------T-----A----A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37300 11 +     49394 AC--A---A---CTAA------------T-----A----A
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62171 11 -     66874 AC--A---A---CTAA------------T-----A----A
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11042 11 -     42923 AC--A---A---CTAA------------T-----A----A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18044 11 -     53142 AC--A---A---CTAA------------T-----A----A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                31995  8 -    327341 AT--A---A---C---------------TA----A-----
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10697  8 +     48891 GC--A---A---C---------------T-----A----A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933560 11 -  22651954 AC--A---a---ctaa------------g-----a----a
i Heterocephalus_glaber.JH602082.1                       I 3 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1434  6 +      8654 -------------AAA------------T-----A----A
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8838  8 -     36432 GC--A---A---C---------------T-----A----G
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552818  8 -   1711038 GC--A---A---C---------------T-----A----a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2255  8 -      2730 GC--A---A---C---------------T-----A----A
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    143998 11 -    630532 GC--A---A---CTAA------------T-----A----A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71373  8 +     83186 AT--A---A---C---------------TA----A-----
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            72991 11 +    143317 AC--A---A---CTAA------------G-----A----A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7043 11 +     12352 GC--A---A---CTAA------------T-----T----A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14227 11 +     55766 GC--A---A---CTAA------------T-----T----A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053827 11 + 191637585 GC--A---A---CTAA------------T-----T----A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802705 11 +  11177569 GC--A---A---CTAA------------T-----T----A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8313 11 -    135385 GC--A---A---TTGA------------G-----A----A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388038 11 +   7955117 GC--A---a---ctaa------------t-----a----a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3605 11 +     11955 AC--A---A---CTAA------------T-----G----A
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11227  8 -     16823 AC--A---A---C---------------T-----C----A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73067  8 -     97402 AC--A---A---C---------------T-----C----A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44447 11 +    110728 GC--A---A---CTAA------------T-----A----G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64380  8 -     65777 GC--A---A---A---------------T-----A----A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 12
s Lemur_catta.scaffold_24                                 14760698 11 +  30322482 AC--A---A---CTAA------------T-----A----A
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5354 11 -     13097 GC--A---A---CTAA------------T-----A----G
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5108 11 +      5940 GC--A---A---CTAA------------T-----A----G
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4931 11 -      5717 GC--A---A---CTAA------------T-----A----G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11317 11 -     11567 GC--A---A---CGAA------------T-----A----G
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12698 11 -     12945 GC--A---A---CGAA------------T-----A----G
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10210 11 +     29618 AC--A---A---GTAA------------T-----A----A
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10206 11 +     31569 AC--A---A---GTAA------------T-----A----A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10216 11 +     24756 AC--A---A---CTAA------------T-----A----A
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10216 11 +     16388 AC--A---A---GTAA------------T-----A----A
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814701  8 -   3914936 at--a---a---g---------------t-----a----a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     19266  1 +     24238 ---------------------------------------a
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342412  8 +    662738 AC--A---A---C---------------T-----C----A
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12506 11 +     19643 AC--A---C---CTAA------------T-----A----A
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046176 11 -   6120653 AC--A---C---CTAA------------T-----A----A
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086104  6 +  43346337 -------------aag------------t-----t----a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615743  1 +  59628241 ---------------------------------------A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224446  8 -    270270 GC--A---A---C---------------A-----A----G
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Manis_javanica.JSZB01003497.1                             674742  8 -    737560 GC--a---a---c---------------t-----a----a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222042  8 +    317179 Gc--a---a---c---------------t-----a----a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502252 11 +  40650429 GC--A---a---ctaa------------t-----a----a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151601  8 +    207569 GC--A---A---A---------------G-----A----C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27426 11 -     74585 GT--A---AGTAA---------------T-----a----a
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52005 14 -    140813 GT--T---A---ACAC------------TAC-T-G----A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88696  8 +     93471 AC--A---A---C---------------T-----C----A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11476 11 +     17804 GC--T---A---CTAA------------T-----A----G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11976 11 -     12984 GC--T---A---CTAA------------T-----A----G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20295 11 -     26561 GC--T---A---CTAA------------T-----A----G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986048 11 +  93316391 AT--A---A---CTAA------------T-----a----a
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47895  6 +    145209 -------------AAA------------C-----A----G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186285  8 +    200668 GC--A---A---C---------------T-----A----A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965038 14 +  27267610 GT--T---A---ATAC------------TAC-G-G----A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364433  8 -   8254450 GC--A---a---c---------------t-----a----a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43340  8 -     48117 GC--A---A---C---------------T-----A----A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23860  6 -     27822 GC--A---A---CT--------------------------
i Miopithecus_ogouensis.k141_1534655                     C 0 I 2
s Mirounga_angustirostris.MirAng_flattened_line_54046         9712  8 +     27589 AT--A---A---G---------------T-----A----A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53830 11 -     62432 AC--A---A---CTAA------------T-----A----A
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360801  8 +    437263 AC--A---A---C---------------T-----C----A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180520  8 +    366855 GC--A---A---C---------------T-----A----A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27139  8 -     82753 GC--A---A---C---------------T-----A----A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19729  8 -     63510 AA--T---A---C---------------TA----C-----
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40362  8 +     47283 TC--A---A---A---------------T-----A----A
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596208 14 + 120012414 GT--T---A---GCAC------------T-TCT-G----A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689405 14 + 129401213 GT--T---A---GCAC------------T-TCT-G----A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217747 14 +  89631738 GT--T---C---GCAC------------T-T-CAG----A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498690 14 + 130317789 GT--T---A---GCAC------------T-TCT-G----A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85407 11 -     86153 GC--A---A---CTAT------------T-----A----A
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356332 11 +  14710649 at--a---agtaa---------------t-----a----a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64288  7 +     67721 GC--A---A---CTA-------------------------
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794640  8 +  10118263 tc--a---a---a---------------t-----a----a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388814  8 +   6019432 tc--a---a---a---------------t-----a----a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384840  8 +   4330536 tc--a---a---a---------------t-----a----a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3634  8 +     18357 TC--A---A---A---------------T-----A----A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120983  6 +    130748 -------------AAA------------C-----A----A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947911  9 +   3037898 GC--A---A---TTAA------------T-----------
i Nannospalax_galili.KL204047.1                          C 0 I 1
s Nasalis_larvatus.k141_1350636                              30585 11 +     34575 GC--A---A---CTAA------------T-----A----A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233467  8 -   7148211 AC--A---C---C---------------T-----C----A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129130  8 -    149072 GC--A---A---C---------------T-----G----A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54929 11 -    132029 GC--A---A---CTAA------------T-----A----A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11024 11 -     16345 GC--A---A---CTAA------------T-----A----A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16909 11 +     22201 GC--A---A---CTAA------------T-----A----A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415130 11 -  22158432 GC--A---A---CTAA------------T-----A----A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27307 11 -     54323 GC--A---A---CTAA------------T-----A----A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199342  1 +   9404916 ---------------------------------------A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639403 11 + 196305487 AC--A---C---CTAA------------T-----A----A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             2006 11 -      9413 AC--A---C---CTAA------------T-----A----A
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566786 11 - 199412804 AC--A---C---CTAA------------T-----A----A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558093 15 -   3988456 GC--A---G---CTAA------------T-----AAATAA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056378  7 -  11899542 GC--A---A---cta-------------------------
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453127  8 +   2017862 AT--A---A---G---------------T-----A----A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437919  8 -    630418 gc--a---g---c---------------t-----a----a
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16113  8 +    150152 GC--A---A---C---------------T-----A----A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95711 14 -    140218 GT--T---A---ATAC------------TAC-T-G----A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6254 14 -     41509 GC--T---A---GTAC------------TCC-C-A----A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103869  8 +  10937097 AC--A---A---C---------------T-----C----A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1167  6 +     11607 -------------AAA------------T-----A----A
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107105947  1 - 174332312 ---------------------------------------a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40385  1 +    559221 ---------------------------------------A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41954 11 -     51505 AC--A---C---TTAA------------T-----A----A
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354958 11 +   1103335 AC--A---C---CTAA------------T-----A----a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405824  8 -  44047080 GC--A---A---C---------------T-----A----A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6343  8 +     17875 GC--A---A---C---------------T-----A----A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1474026 11 - 189151597 GC--A---a---ctaa------------t-----g----a
i Pan_troglodytes.CM009242.2                             I 7 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25731  8 -    230217 AT--A---A---C---------------T-----A----A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463057  8 -  18783137 AT--a---a---c---------------t-----a----a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973716  8 +   8748460 AT--a---a---c---------------t-----a----a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617349  8 +   2937107 GC--A---A---C---------------T-----A----A
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16311  7 +     78924 AT--G---A---T---------------T-----A-----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28285 11 +     31479 AC--A---C---CTAA------------T-----A----A
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20653 11 -     24908 AC--A---C---CTAA------------T-----A----A
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3108 11 +      9367 AC--A---G---CAAA------------T-----A----A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249477 14 +  18517816 GC--T---A---GTAC------------TAC-T-C----A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33122 11 -     56120 GA--A---A---CTAC------------C-----A----A
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 24
s Phocoena_phocoena.PhoPho_flattened_line_24159               5395  8 -     63832 AC--A---A---C---------------T-----C----A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3948 11 +     55023 GC--A---A---CTAA------------T-----A----A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3486 11 -     89929 GC--A---A---CTAA------------T-----A----A
i Piliocolobus_gordonorum.k141_381342                    C 0 I 85
s Piliocolobus_kirkii.k141_1310104                            4076 11 +     40849 GC--A---A---CTAA------------T-----A----A
i Piliocolobus_kirkii.k141_1310104                       C 0 I 85
s Piliocolobus_tephrosceles.PDMG02000141.1                  255751 11 +  14605196 GC--a---a---ctaa------------t-----a----a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 85
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5220  8 +     22231 GC--A---A---A---------------T-----A----A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             65989 11 +    207309 GC--A---A---CTAA------------T-----A----G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7077 11 -     25401 GC--A---A---CTAA------------T-----A----G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32825 11 +     58159 GC--A---A---CTAA------------T-----A----G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33101 11 +     63561 GC--A---A---CTAA------------T-----A----G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32861 11 +     51148 GC--A---A---CTAA------------T-----A----G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557831 11 -   4542175 GC--A---A---CTAA------------T-----A----G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32845 11 +     51125 GC--A---A---CTAA------------T-----A----G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2412  8 +     19503 AC--A---A---C---------------T-----C----A
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9263 11 +     39866 GC--A---G---CTAA------------T-----A----G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4345 11 -      9282 GC--A---G---CTAA------------T-----A----G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43749 11 -     87950 GC--A---G---CTAA------------T-----A----G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44143 11 -     88961 GC--A---G---CTAA------------T-----A----G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8841 11 -     39403 GC--A---G---CTAA------------T-----A----G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43792 11 +     87928 GC--A---G---CTAA------------T-----A----G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8840 11 -     60166 GC--A---G---CTAA------------T-----A----G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15777 11 -     67232 GC--A---G---CTAA------------T-----A----G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43693 11 -     90634 GC--A---G---CTAA------------T-----A----G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45160 11 +     89403 GC--A---G---CTAA------------T-----A----G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179139 11 - 189387572 GC--a---a---ctaa------------t-----a----a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193956 11 -   9816681 GC--A---A---CTAA------------T-----A----A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29096 11 +     69807 GC--A---A---CTAA------------T-----A----A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46277 11 -     80239 GC--A---A---CTAA------------T-----A----A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5425  6 +      7663 -------------AAA------------T-----A----A
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983846 11 +   4620579 AC--a---a---ctaa------------t-----a----a
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567356 11 -   2598838 AC--A---A---CTAA------------T-----G----A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           4994 11 -      7103 AC--A---A---CTAA------------T-----G----A
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5591 11 -     11706 AC--A---A---CTAA------------T-----G----A
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9328 11 -     30655 AC--A---A---CTAA------------T-----G----A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35642 11 +     46564 AC--A---A---CTAA------------T-----G----A
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95921 11 -     98465 AC--A---A---CTAA------------T-----G----A
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9560 11 +     35169 AC--A---A---CTAA------------T-----G----A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39528 14 +     52041 GT--T---A---ACAC------------TAC-T-G----A
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53411  8 -     66298 GC--A---A---C---------------T-----A----A
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5904 11 -     18639 AT--A---AGTAA---------------T-----A----A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842018  8 -  28871421 gc--a---a---c---------------t-----a----g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538533  8 -   4952924 gc--a---a---c---------------t-----a----g
i Pteropus_vampyrus.KN525825.1                           C 0 I 2
s Puma_concolor.QAVW01001104.1                            18100374  8 +  38429054 AT--A---A---C---------------T-----a----a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28463 11 +     91421 GC--A---A---CTAA------------T-----A----A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  154947 11 -   7812017 GC--A---A---CTAA------------T-----A----A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9320 11 +     72585 GC--A---A---CTAA------------T-----A----A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54834  8 +     55069 GC--A---A---C---------------T-----A----A
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915983  8 +   3329780 GC--A---a---c---------------t-----a----a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3050 11 +      7119 GC--A---A---CTAA------------T-----A----A
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123665 11 + 195417433 gc--a---a---ctaa------------t-----a----a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237892 11 -   7961872 GC--A---A---CTAA------------T-----A----A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76517  8 -    116970 GC--A---A---C---------------T-----A----G
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                218 11 -      1130 GC--A---A---CTAA------------T-----A----G
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5120 11 +      6077 GC--A---A---CTAA------------T-----A----G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5213 11 +      5971 GC--A---A---CTAA------------T-----A----C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5131 11 +      5932 GC--A---A---CTAA------------T-----A----C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3476 11 -      4390 GC--A---A---CTAA------------T-----A----C
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393233 11 - 209938924 GC--A---A---CTAA------------T-----A----G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5079 11 +      5979 GC--A---A---CTAA------------T-----A----C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1649 11 -     22275 GC--A---A---CTAA------------T-----A----G
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9512  8 +     16473 GC--A---A---C---------------T-----A----A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110243 11 + 121099817 GC--A---G---CAAA------------T-----g----g
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31810 11 -     47369 GC--A---G---CAAA------------T-----G----G
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32196 11 -     79414 GC--A---G---CAAA------------T-----G----G
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28887 11 -     34454 GC--A---G---CAAA------------T-----G----G
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16288 11 -     22428 GC--A---G---CAAA------------T-----G----G
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31442 11 -     47109 GC--A---G---CAAA------------T-----G----G
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239493 11 +   5703754 GA--A---A---CTAA------------T-----A----G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9083 11 +     21866 GA--A---A---CTAA------------T-----A----G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26786 11 +     27374 GC--A---A---CTAA------------T-----a----a
i Semnopithecus_entellus.k141_158471                     C 0 I 65
s Semnopithecus_hypoleucos.k141_1910531                      30298 11 +     58920 GC--A---A---CTAA------------T-----A----A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 I 150
s Semnopithecus_johnii.k141_843753                           16796 11 -     45317 GC--A---A---CTAA------------T-----A----A
i Semnopithecus_johnii.k141_843753                       C 0 I 68
s Semnopithecus_priam.k141_714795                            24454 11 -     42441 GC--A---A---CTAA------------T-----A----A
i Semnopithecus_priam.k141_714795                        C 0 I 68
s Semnopithecus_schistaceus.k141_1432920                     27132 11 -     29113 GC--A---A---CTAA------------T-----A----A
i Semnopithecus_schistaceus.k141_1432920                 C 0 I 68
s Semnopithecus_vetulus.k141_244474                          30207 11 -     48123 GC--A---A---CTAA------------T-----A----A
i Semnopithecus_vetulus.k141_244474                      C 0 I 68
s Sigmodon_hispidus.SigHis_scaffold_20193                    51274 14 +     77746 GC--T---A---ATAC------------AAC-T-G----A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865401  8 -   1910179 GC--A---A---C---------------T-----A----T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672483 22 +  18376816 CTGTA---C---A---AATTAATAATTCT-----A----C
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869616 11 +   3870691 GC--A---a---ctaa------------t-----a----a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7986  8 -     97271 GT--A---A---G---------------T-----G----a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126146  8 +    196729 AT--A---A---C---------------TA----A-----
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645180  8 +  69701581 GT--A---A---C---------------T-----A----A
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392395 11 +   1523678 GC--A---A---CTAA------------T-----A----A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15565  8 +     22964 GC--A---A---C---------------T-----a----a
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3975  6 +      5583 -------------AAA------------C-----A----A
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192864  8 +    199430 GC--A---A---C---------------T-----A----A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106832  8 -    539355 GC--A---A---C---------------T-----A----A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1909  7 +      9917 GC--A---A---GTC-------------------------
i Tarsius_lariang.k141_1733899                           C 0 I 1
s Tarsius_wallacei.k141_226975                                8707  7 +     20590 GC--A---A---GTC-------------------------
i Tarsius_wallacei.k141_226975                           C 0 I 1
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25278 11 -     33621 GC--A---A---GTAG------------G-----A----A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 21
s Tolypeutes_matacus.TolMat_scaffold_31955                   20932  6 -     31044 -------------AAA------------C-----A----A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481410  8 -    610378 GC--A---A---C---------------T-----A----A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22331 11 +     26378 GC--A---A---CTAA------------T-----A----A
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35007 11 -     78344 GC--A---A---CTAA------------T-----A----A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21656 11 +     25722 GC--A---A---CTAA------------T-----A----A
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30031 11 -     62838 GC--A---A---CTAA------------T-----A----A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30075 11 +     46913 GC--A---A---CTAA------------T-----A----A
i Trachypithecus_geei.k141_1001272                       I 68 C 0
s Trachypithecus_germaini.k141_57262                         10814 11 -     28527 GC--A---A---CTAA------------T-----A----A
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31966 11 -     64340 GC--A---A---CTAA------------T-----A----A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30004 11 -     63452 GC--A---A---CTAA------------T-----A----A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11451 11 +     22490 GC--A---A---CTAA------------T-----A----A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4874 11 -      6147 GC--A---A---CTAA------------T-----A----A
i Trachypithecus_melamera.k141_591572                    I 68 C 0
s Trachypithecus_obscurus.k141_848057                        11787 11 -     13050 GC--A---A---CTAA------------T-----A----A
i Trachypithecus_obscurus.k141_848057                    I 68 C 0
s Trachypithecus_phayrei.ctg124                             256949 11 -   6242583 GC--A---A---CTAA------------T-----A----A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3045 11 +     19340 GC--A---A---CTAA------------T-----A----A
i Trachypithecus_pileatus.k141_2622778                   I 68 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175122  8 -    200418 GC--A---A---C---------------T-----A----G
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482799  6 -  10818551 -------------AAA------------T-----A----A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835611 11 -   4065304 GC--A---A---CTGA------------T-----A----A
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9632 11 -     70247 GC--A---A---CTAA------------T-----A----A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17366994  8 -  33153633 AC--A---A---C---------------T-----C----A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4798  8 -     21056 GC--A---A---C---------------T-----A----A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183344  8 +   5085361 at--a---a---g---------------t-----a----a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26502 11 -     30710 AC--A---A---CTAA------------T-----A----A
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25409 11 -    147434 AC--A---A---CTAA------------T-----A----A
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77542  8 +   5488506 GC--A---A---C---------------T-----A----A
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106108  1 -    112863 ---------------------------------------A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175372 11 -    224448 GC--A---A---CCAA------------T-----A----A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30339  8 -     86975 AT--A---A---G---------------T-----A----A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1186 11 -      1899 GC--A---A---CTAA------------T-----C----A
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Theropithecus_gelada.CM009954.1                           354612 59 - 186847797 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955  0 +    313613 C
e Rattus_norvegicus.chr16                                 37024043 457 -  90668790 I
e Papio_ursinus.k141_5784434                                   367 59 -     10386 I
e Papio_papio.k141_3538738                                     407 59 +     10553 I
e Papio_kindae.k141_2214839                                  23736 59 -     27687 I
e Papio_hamadryas.Contig39                                  293831 59 -  20919399 I
e Papio_cynocephalus.k141_1507553                            11088 59 +     21308 I
e Papio_anubis.CM001495.2                                   244803 59 - 183742232 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Mandrillus_sphinx.Contig270                               358625 59 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        323794 59 +  24302211 I
e Macaca_tonkeana.k141_339739                                 4304 59 +     17132 I
e Macaca_thibetana.k99_45532                                  1144 59 -      5049 I
e Macaca_silenus.Contig273                                  272506 59 +    668171 I
e Macaca_siberu.k141_2185972                                 46598 59 +     59329 I
e Macaca_radiata.k141_2139468                                 2657 59 +     14901 I
e Macaca_nigra.k141_2818840                                  50126 59 -     62418 I
e Macaca_nemestrina.KQ007038.1                              400954 59 +  25927173 I
e Macaca_mulatta.NC_041758.1                                416724 59 - 187317192 I
e Macaca_maura.k141_1103459                                  47521 59 +     51645 I
e Macaca_leonina.k141_321385                                 37777 59 -     50087 I
e Macaca_fuscata.k119_546792                                 26601 59 +     30527 I
e Macaca_fascicularis.k141_1617581                            1486 59 -      5035 I
e Macaca_cyclopis.k119_263443                                26648 59 +     30207 I
e Macaca_assamensis.Contig5                                 374380 59 -  60120075 I
e Macaca_arctoides.k141_1757516                              46718 59 -     61512 I
e Lophocebus_aterrimus.ctg367                               335329 59 -   1826925 I
e Jaculus_jaculus.JH725527.1                               1241237  0 +   9596543 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46057  0 -     83289 C
e Condylura_cristata.JH655891.1                           35808250  0 +  53390261 C
e Cercocebus_torquatus.k141_2159127                          46000 59 -    148725 I
e Cercocebus_lunulatus.k141_2500334                           1616 59 -     14410 I
e Cercocebus_chrysogaster.k141_1522556                       46183 59 +     47900 I
e Cercocebus_atys.KQ010504.1                                142444 59 -   4669795 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6693 5 +     36723 T--A---A---TT
s Acinonyx_jubatus.LLWD01001279.1                           814123 1 +   1699592 -----------t-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27377 5 +     63021 T--T---A---TT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416578 5 +  29979442 t--a---a---ta
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216919 2 +    347723 t--a---------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19756 5 -     61208 T--A---A---TT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49338 5 +     53615 T--A---A---TT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1369 5 +     13857 T--A---A---TT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17920 5 -     21945 T--A---A---TT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19605 5 +     32033 T--A---A---TT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73442 5 -     84148 T--A---A---TT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45681 5 -     78289 T--A---A---TT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45120 5 +     55831 T--A---A---TT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43570 5 -     64179 T--A---A---TT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            677 5 -      3959 T--A---A---TT
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42195 5 +     45454 T--A---A---TT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47844 5 +     70886 T--A---A---TT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10017 5 +     30854 T--A---A---TT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34151 5 +     42133 T--A---A---TT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586965 2 +   2318259 T--A---------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178383 2 -    412891 T--A---------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_21030             52042 2 -     68529 T--A---------
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2409 5 +     17741 T--A---A---TT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3034 5 -     15923 T--A---A---TT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673316 5 +   5030052 t--a---a---tt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3310 5 -     16391 T--A---A---TT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2869 5 -     17186 T--A---A---TT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17384 5 -     32367 T--A---A---TT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21441 5 -     45910 T--A---A---GG
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6638 8 -     15198 T--AATAA---TT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275907 5 +  21539123 T--A---A---TT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12074 5 +     48076 T--A---A---TT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7209 5 -     28759 T--C---A---TT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34764 5 +     44353 T--A---A---TT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50134 5 -     71267 T--C---A---TT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24192 5 -     33135 T--A---A---TT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7473 5 +     11645 C--A---A---CC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7481 5 -     19611 C--A---A---CC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964726 3 -  23207421 T--A---A-----
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1226 3 -     25979 T--A---A-----
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87971 2 +    124022 T--A---------
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23506 2 +    288883 T--a---------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357896 2 +  48749331 T--a---------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756460 2 +   1948126 T--a---------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546602 2 -  45695690 T--a---------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531610 2 -   4408762 T--a---------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9001 5 +     28062 T--A---A---TT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44295 5 -     91139 T--A---A---TT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21821 5 +     95584 T--A---A---TT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21734 5 +    119600 T--A---A---TT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11389 5 +     18648 T--C---A---TT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10905 5 -     13885 T--C---A---TT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2991 5 -      8861 T--C---A---TT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455383 5 + 189096842 T--C---A---TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2906 5 +      8664 T--C---A---TT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632216 5 +  17673402 T--A---A---TG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666503 5 +   7040546 T--A---A---TG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210161 5 +   1652518 T--A---A---TG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506475 5 +  60362399 T--a---g---ta
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10111 5 -     23171 T--A---G---TA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223454 5 +   9314153 T--A---G---TA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616589 5 +  59632846 T--a---g---ta
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108170 5 -  63665305 T--A---G---TA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410694 2 -  46296322 T--A---------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592968 2 +  44709034 T--A---------
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271691 5 +    496798 t--a---a---tt
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1508 8 +      9923 T--AATAA---TA
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28876 5 -     39886 T--T---A---TC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80791 5 -    217609 T--A---C---CA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997603 5 +  23392119 c--a---a---ca
i Cavia_aperea.AVPZ01000300.1                            C 0 I 3
s Cavia_porcellus.DS562891.1                               5001045 5 +  23407841 c--a---a---ca
i Cavia_porcellus.DS562891.1                             C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_23560                       64124 5 -     66877 C--A---A---CA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 3
s Cebuella_niveiventris.k141_592277                           6304 5 -     12580 T--C---A---TT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44362 5 +     53515 T--C---A---TT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374130 5 -  26074798 T--A---A---TT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9184 5 -     34880 T--A---A---TT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68280 5 -     89041 T--A---A---TT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3652 5 -      5494 T--A---A---TT
i Cephalopachus_bancanus.k141_1689090                    I 1 C 0
s Ceratotherium_simum.JH767749.1                          15493410 5 -  27778364 t--a---a---ta
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20243 5 +     27315 T--A---A---TA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28252 5 -     40656 T--A---A---TT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8216 5 +     20796 T--A---A---TT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13334 5 -     17524 T--A---A---TT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29057 5 -     34525 T--A---A---TT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12837 5 -     25376 T--A---A---TT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365424 5 -  39242232 T--A---A---TT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271151 5 +  21565898 T--A---A---TT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33519 5 -     45857 T--A---A---TT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28420 5 -     32606 T--T---A---TT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4582 5 +      8499 T--A---A---TT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26978 5 +     70610 T--A---A---TT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23939 5 +     36323 T--A---A---TT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13855 5 -     19938 G--A---A---TA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 1
s Cheirogaleus_major.k141_666340                             31846 5 -     33796 C--A---A---CT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6360 5 -     15404 C--A---A---CT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10109 5 -     32913 T--A---A---TT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20522 5 -     40346 T--A---A---TT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20777 5 +    216457 T--A---A---TT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20566 5 +     39636 T--A---A---TT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239934 5 -   2543920 c--a---a---ga
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            229 5 +      1057 T--G---A---TT
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43632 5 -    112038 T--A---A---TT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9183 5 +     34062 T--A---A---TT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344840 5 +  18827391 T--A---A---TT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11382 5 -     44032 T--A---A---TT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306165 5 - 135778131 t--a---a---tt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  102 5 +     10270 T--A---G---TA
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607578 5 -    839153 T--A---G---TA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_4313612                11 5 +       302 T--A---A---TT
i Chrysochloris_asiatica.ChrAsi_scaffold_4313612         C 0 C 0
s Colobus_angolensis.KN981557.1                             410571 5 -   2368649 t--a---a---ta
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380452 5 - 200372422 T--A---A---TA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4009 5 -     84244 T--A---A---TA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3983 5 -      8242 T--A---A---TA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46057 3 -     83289 -------A---CT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117749 5 - 224834208 T--T---A---TT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              11004 5 +     12657 T--G---G---CT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5570 5 +     87169 T--a---a---ta
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646609 5 -   1526836 T--A---A---TA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5514 5 +     36344 C--A---A---CA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 3
s Dasyprocta_punctata.DasPun_flattened_line_15900            29298 5 +     75252 C--A---A---CA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 3
s Dasypus_novemcinctus.JH564415.1                          2111208 5 -   2246927 t--a---a---ta
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293767 5 +  12879189 T--A---A---CT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633132 3 -  35494412 T--A---A-----
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866497 5 -  20541912 T--A---C---TA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665683 5 -   1390856 t--a---a---ta
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140482 5 -    198055 T--A---A---TA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951777 5 -  37912305 T--A---T---GA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6711 5 -     10735 T--A---T---GA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856728 5 - 111700974 T--A---A---TT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7476 5 +     19438 t--a---a---ta
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241319 5 -    607251 t--a---a---ta
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33603 5 +    110024 T--T---A---TT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15606 5 +     18970 T--T---A---TT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917322 2 +  41312741 t--a---------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580090 4 +  14770903 t--a---a---t-
i Eptesicus_fuscus.JH977646.1                            C 0 I 8
s Equus_asinus.JREZ01000139.1                              3042627 5 -   4378816 t--a---a---ta
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376565 5 +  39960074 t--a---a---ta
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412547 5 -    498745 t--a---a---ta
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667363 5 +   7059049 T--C---A---TC
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264376 5 +  21539334 T--A---A---TT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Felis_catus.CM001381.2                                 186248033 1 - 206538554 -----------t-
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117819 1 - 205367284 -----------t-
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28919 1 -     30238 -----------T-
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72340 3 -    133382 T--A---A-----
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114                53 3 +     25849 T--A---A-----
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923152 5 -   3816255 c--a---a---ca
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126805 5 -    137831 T--A---A---GG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10350 5 +     22493 T--A---A---GG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22433 5 -     32986 T--A---A---GG
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2370 5 -     28519 T--A---A---TT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93039 2 -     95226 T--A---------
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2511 5 -      6791 T--A---A---TA
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               7002 5 -      8343 T--A---A---TT
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                256009 5 - 186649187 t--a---a---tt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3577 5 -     78134 T--A---A---TA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32003 5 -    327341 T--a---a---ta
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10705 2 +     48891 T--A---------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933571 5 -  22651954 c--a---a---ca
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1440 5 +      8654 T--A---A---TC
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8846 3 -     36432 T--A---A-----
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552826 5 -   1711038 g--a---a---ta
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2263 5 -      2730 G--A---A---TA
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144009 5 -    630532 T--T---A---TT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71381 5 +     83186 T--a---a---ta
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73002 5 +    143317 C--A---A---CA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 3
s Hylobates_agilis.k141_1155965                               7054 5 +     12352 T--T---A---TT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14238 5 +     55766 T--T---A---TT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053838 5 + 191637585 T--T---A---TT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802716 5 +  11177569 T--T---A---TT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8324 5 -    135385 C--A---A---CA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388049 5 +   7955117 t--g---a---tt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3616 5 +     11955 C--A---A---CC
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11235 3 -     16823 T--A---A-----
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241237 5 +   9596543 T--A---A---TT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73075 3 -     97402 T--A---A-----
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44458 5 +    110728 T--A---A---TT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    33651 4 -     49555 T--A---A---T-
i Lasiurus_borealis.LasBor_scaffold_26245                I 60 I 250
s Leontocebus_fuscicollis.k141_2994775                        5365 5 -     13097 T--G---A---TT
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5119 5 +      5940 T--G---A---TT
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4942 5 -      5717 T--G---A---TT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11328 5 -     11567 T--C---A---TT
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12709 5 -     12945 T--C---A---TT
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10221 5 +     29618 T--A---A---CT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10217 5 +     31569 T--A---A---CT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10227 5 +     24756 T--A---A---CT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10227 5 +     16388 T--A---A---CT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814709 2 -   3914936 t--a---------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     19267 5 +     24238 t--a---a---at
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342420 3 +    662738 T--A---A-----
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12517 5 +     19643 T--A---A---AG
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046187 5 -   6120653 T--A---A---AG
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086110 5 +  43346337 t--t---a---tt
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615744 5 +  59628241 T--a---g---ta
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224454 5 -    270270 T--A---A---Ta
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Manis_javanica.JSZB01003497.1                             674750 5 -    737560 t--a---a---ta
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222050 5 +    317179 t--a---a---ta
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502263 5 +  40650429 t--g---a---tt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151609 5 +    207569 T--A---C---TA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27437 2 -     74585 t--a---------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52019 5 -    140813 T--A---A---TT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88704 3 +     93471 T--A---A-----
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11487 5 +     17804 T--C---A---TT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11987 5 -     12984 T--C---A---TT
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20306 5 -     26561 T--C---A---TT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986059 5 +  93316391 c--a---a---ct
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47901 5 +    145209 T--A---A---TT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186293 5 +    200668 T--A---A---Ta
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965052 5 +  27267610 T--T---A---TT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364441 2 -   8254450 -----------ta
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43348 5 -     48117 T--A---A---TA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23868 5 -     27822 T--A---A---TT
i Miopithecus_ogouensis.k141_1534655                     I 2 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9720 2 +     27589 T--A---------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53841 5 -     62432 C--A---A---CT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360809 3 +    437263 T--A---A-----
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180528 5 +    366855 T--A---A---AT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27147 2 -     82753 T--A---------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 3
s Mungos_mungo.MunMun_flattened_line_18455                   19737 5 -     63510 T--A---C---TA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40370 4 +     47283 T--A---A---T-
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596222 5 + 120012414 T--T---A---TT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689419 5 + 129401213 T--T---A---TT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217761 5 +  89631738 T--T---A---TT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498704 5 + 130317789 T--T---A---TT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85418 5 -     86153 T--A---A---TA
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 3
s Mustela_putorius.JH418006.1                             14356343 2 +  14710649 t--a---------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myotis_brandtii.KE162005.1                               9794648 5 +  10118263 t--a---a---ta
i Myotis_brandtii.KE162005.1                             C 0 I 1
s Myotis_davidii.KB100139.1                                4388822 5 +   6019432 t--a---a---ta
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384848 5 +   4330536 t--a---a---ta
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3642 3 +     18357 T--A---A-----
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 9
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120989 5 +    130748 T--A---A---TA
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947921 4 +   3037898 ---T---A---TT
i Nannospalax_galili.KL204047.1                          I 1 C 0
s Nasalis_larvatus.k141_1350636                              30596 5 +     34575 T--A---A---TT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233475 3 -   7148211 T--G---A-----
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129138 5 -    149072 T--A---A---TA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54940 5 -    132029 T--T---A---TT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11035 5 -     16345 T--T---A---TT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16920 5 +     22201 T--T---A---TT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415141 5 -  22158432 T--T---A---TT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27318 5 -     54323 T--T---A---TT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199343 5 +   9404916 T--a---g---ta
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639414 5 + 196305487 T--A---A---AG
i Nycticebus_bengalensis.LG01                            C 0 I 1
s Nycticebus_coucang.k141_1296080                             2017 5 -      9413 T--A---A---AG
i Nycticebus_coucang.k141_1296080                        C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566797 5 - 199412804 T--A---A---AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 1
s Ochotona_princeps.JH802162.1                             2558108 5 -   3988456 T--A---A---TG
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453135 2 +   2017862 T--A---------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437927 5 -    630418 t--a---a---ta
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16121 2 +    150152 T--A---------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95725 5 -    140218 T--T---A---TT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6268 5 -     41509 T--T---G---TT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103877 3 +  10937097 T--A---A-----
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1173 5 +     11607 T--A---A---TA
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107105948 5 - 174332312 t--a---a---at
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40386 5 +    559221 T--A---G---Ta
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41965 5 -     51505 T--A---A---GG
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354969 5 +   1103335 t--a---a---gg
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405832 2 -  44047080 T--A---------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6351 2 +     17875 T--A---------
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1474037 5 - 189151597 t--a---a---tt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25739 4 -    230217 T--a---a---t-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463065 4 -  18783137 t--a---a---t-
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973724 4 +   8748460 t--a---a---t-
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617357 2 +   2937107 T--A---------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16318 5 +     78924 T--a---a---ta
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28296 5 +     31479 T--A---A---GG
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20664 5 -     24908 T--A---A---GG
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3119 5 +      9367 T--A---C---CA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249491 5 +  18517816 T--C---A---TT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33157 5 -     56120 C--C---A---CA
i Petromus_typicus.PetTyp_scaffold_17301                 I 24 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5403 3 -     63832 T--A---A-----
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3959 5 +     55023 T--T---A---TT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5228 4 +     22231 T--A---A---T-
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 5
s Pithecia_albicans.k141_1239476                             66000 5 +    207309 T--A---A---TT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7088 5 -     25401 T--A---A---TT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32836 5 +     58159 T--A---A---TT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33112 5 +     63561 T--A---A---TT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32872 5 +     51148 T--A---A---TT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557842 5 -   4542175 T--A---A---TT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32856 5 +     51125 T--A---A---TT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2420 3 +     19503 T--A---A-----
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9274 5 +     39866 T--A---A---TT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4356 5 -      9282 T--A---A---TT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43760 5 -     87950 T--A---A---TT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44154 5 -     88961 T--A---A---TT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8852 5 -     39403 T--A---A---TT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43803 5 +     87928 T--A---A---TT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8851 5 -     60166 T--A---A---TT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15788 5 -     67232 T--A---A---TT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43704 5 -     90634 T--A---A---TT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45171 5 +     89403 T--A---A---TT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179150 5 - 189387572 t--a---a---tt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193967 5 -   9816681 T--A---A---TT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29107 5 +     69807 T--A---A---TT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46288 5 -     80239 T--A---A---TT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5431 5 +      7663 T--A---A---TC
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567367 5 -   2598838 C--A---A---CC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5005 5 -      7103 C--A---A---CC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5602 5 -     11706 C--A---A---CC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9339 5 -     30655 C--A---A---CC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35653 5 +     46564 C--A---A---CC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95932 5 -     98465 C--A---A---CC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9571 5 +     35169 C--A---A---CC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39542 5 +     52041 T--A---A---TT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53419 5 -     66298 T--a---c---ca
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538543 2 -   4952924 -----------Ta
i Pteropus_vampyrus.KN525825.1                           I 2 C 0
s Puma_concolor.QAVW01001104.1                            18100382 1 +  38429054 -----------t-
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5915 2 -     18639 T--A---------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842026 2 -  28871421 t--a---------
i Pteropus_alecto.KB030862.1                             C 0 I 2
s Pygathrix_cinerea.k141_1153803                             28474 5 +     91421 T--A---A---TA
i Pygathrix_cinerea.k141_1153803                         C 0 I 68
s Pygathrix_nigripes_b.ctg100                                  154958 5 -   7812017 T--A---A---TT
i Pygathrix_nigripes_b.ctg100                               C 0 I 136
s Pygathrix_nigripes_a.k141_215492                              9331 5 +     72585 T--A---A---TA
i Pygathrix_nigripes_a.k141_215492                         C 0 I 68
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54842 5 +     55069 T--A---A---TA
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2915991 5 +   3329780 t--g---a---ta
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3061 5 +      7119 T--A---A---TA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123676 5 + 195417433 t--a---a---ta
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237903 5 -   7961872 T--A---A---TA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76525 5 -    116970 T--A---A---Ta
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                229 5 -      1130 T--G---A---TT
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5131 5 +      6077 T--G---A---TT
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5224 5 +      5971 T--G---A---TT
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5142 5 +      5932 T--G---A---TT
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3487 5 -      4390 T--G---G---TT
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393244 5 - 209938924 T--G---A---TT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5090 5 +      5979 T--G---G---TT
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1660 5 -     22275 T--G---A---TT
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9520 2 +     16473 T--A---------
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110254 5 + 121099817 t--a---a---tt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31821 5 -     47369 T--A---A---TT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32207 5 -     79414 T--A---A---TT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28898 5 -     34454 T--A---A---TT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16299 5 -     22428 T--A---A---TT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31453 5 -     47109 T--A---A---TT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239504 5 +   5703754 T--A---A---TT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9094 5 +     21866 T--A---A---TT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_johnii.k141_843753                           16875 5 -     45317 T--A---A---TT
i Semnopithecus_johnii.k141_843753                       I 68 C 0
s Semnopithecus_priam.k141_714795                            24533 5 -     42441 T--A---A---TT
i Semnopithecus_priam.k141_714795                        I 68 C 0
s Semnopithecus_schistaceus.k141_1432920                     27211 5 -     29113 T--A---A---TT
i Semnopithecus_schistaceus.k141_1432920                 I 68 C 0
s Semnopithecus_vetulus.k141_244474                          30286 5 -     48123 T--A---A---TT
i Semnopithecus_vetulus.k141_244474                      I 68 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51288 5 +     77746 T--T---G---TG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865409 5 -   1910179 T--C---A---ct
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672505 5 +  18376816 T--G---G---CT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869627 5 +   3870691 t--g---a---tt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7994 2 -     97271 t--a---------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126154 5 +    196729 T--a---a---ta
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645188 5 +  69701581 T--A---T---TA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392406 5 +   1523678 T--T---A---TT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15573 5 +     22964 t--a---a---ta
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3981 5 +      5583 T--A---A---TA
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192872 5 +    199430 T--A---A---TA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106840 5 -    539355 T--A---A---TA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1917 5 +      9917 T--A---A---TT
i Tarsius_lariang.k141_1733899                           I 1 C 0
s Tarsius_wallacei.k141_226975                                8715 5 +     20590 T--A---A---TT
i Tarsius_wallacei.k141_226975                           I 1 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25310 5 -     33621 C--A---A---CA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 21 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20938 5 -     31044 T--A---A---TA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481418 7 -    610378 TATA---A---TA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22342 5 +     26378 T--A---A---TA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35018 5 -     78344 T--A---A---TT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21667 5 +     25722 T--A---A---TA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30042 5 -     62838 T--A---A---TT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30086 5 +     46913 T--A---A---TT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10825 5 -     28527 T--A---A---TA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31977 5 -     64340 T--A---A---TT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30015 5 -     63452 T--A---A---TT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11462 5 +     22490 T--A---A---TT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4885 5 -      6147 T--A---A---TT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11798 5 -     13050 T--A---A---TT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256960 5 -   6242583 T--A---A---TT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3056 5 +     19340 T--A---A---TT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175130 5 -    200418 C--A---A---TA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 1
s Trichechus_manatus.JH594705.1                            6482805 5 -  10818551 T--A---A---CT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1835622 5 -   4065304 T--A---A---GT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9643 5 -     70247 T--A---A---GT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367002 3 -  33153633 T--A---A-----
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4806 5 -     21056 T--A---A---TT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183352 8 +   5085361 t--a---ataata
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   77550 5 +   5488506 T--A---A---TG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106109 5 -    112863 T--A---G---TA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175383 5 -    224448 T--T---G---TT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30347 2 -     86975 T--A---------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1197 5 -      1899 T--A---A---TT
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Myocastor_coypus.MyoCoy_scaffold_15261                     64295 0 +     67721 C
e Capromys_pilorides.CapPil_scaffold_762519                    711 0 -      1607 C
e Octodon_degus.JH651603.1                                11056385 0 -  11899542 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Dinomys_branickii.DinBra_scaffold_10381                   100012 0 -    115145 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  19780 6 +     50838 I
e Elephantulus_edwardii.JH947257.1                         1226946 0 +  10337057 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Varecia_variegata.k141_289850                              25420 0 -    147434 C
e Varecia_rubra.k141_787544                                  26513 0 -     30710 C
e Theropithecus_gelada.CM009954.1                           354612 59 - 186847797 I
e Semnopithecus_hypoleucos.k141_1910531                      30309 150 +     58920 I
e Semnopithecus_entellus.k141_158471                         26797 65 +     27374 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955 0 +    313613 C
e Rattus_norvegicus.chr16                                 37024043 457 -  90668790 I
e Prolemur_simus.MPIZ01000396.1                            1983857 0 +   4620579 C
e Piliocolobus_tephrosceles.PDMG02000141.1                  255762 85 +  14605196 I
e Piliocolobus_kirkii.k141_1310104                            4087 85 +     40849 I
e Piliocolobus_gordonorum.k141_381342                         3497 85 -     89929 I
e Papio_ursinus.k141_5784434                                   367 59 -     10386 I
e Papio_papio.k141_3538738                                     407 59 +     10553 I
e Papio_kindae.k141_2214839                                  23736 59 -     27687 I
e Papio_hamadryas.Contig39                                  293831 59 -  20919399 I
e Papio_cynocephalus.k141_1507553                            11088 59 +     21308 I
e Papio_anubis.CM001495.2                                   244803 59 - 183742232 I
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Mandrillus_sphinx.Contig270                               358625 59 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        323794 59 +  24302211 I
e Macaca_tonkeana.k141_339739                                 4304 59 +     17132 I
e Macaca_thibetana.k99_45532                                  1144 59 -      5049 I
e Macaca_silenus.Contig273                                  272506 59 +    668171 I
e Macaca_siberu.k141_2185972                                 46598 59 +     59329 I
e Macaca_radiata.k141_2139468                                 2657 59 +     14901 I
e Macaca_nigra.k141_2818840                                  50126 59 -     62418 I
e Macaca_nemestrina.KQ007038.1                              400954 59 +  25927173 I
e Macaca_mulatta.NC_041758.1                                416724 59 - 187317192 I
e Macaca_maura.k141_1103459                                  47521 59 +     51645 I
e Macaca_leonina.k141_321385                                 37777 59 -     50087 I
e Macaca_fuscata.k119_546792                                 26601 59 +     30527 I
e Macaca_fascicularis.k141_1617581                            1486 59 -      5035 I
e Macaca_cyclopis.k119_263443                                26648 59 +     30207 I
e Macaca_assamensis.Contig5                                 374380 59 -  60120075 I
e Macaca_arctoides.k141_1757516                              46718 59 -     61512 I
e Lophocebus_aterrimus.ctg367                               335329 59 -   1826925 I
e Lemur_catta.scaffold_24                                 14760709 0 +  30322482 C
e Hapalemur_occidentalis.k141_578367                         18055 0 -     53142 C
e Hapalemur_meridionalis.k141_258450                         11053 0 -     42923 C
e Hapalemur_griseus.k141_763500                              62182 0 -     66874 C
e Hapalemur_gilberti.k141_646465                             37311 0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          15912 0 -     40692 C
e Eulemur_sanfordi.k141_1122526                              60228 0 -    111500 C
e Eulemur_rufus.k141_514691                                  43825 0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            6105 0 +     30972 C
e Eulemur_mongoz.k141_232305                                 49381 0 -     97555 C
e Eulemur_macaco.k141_1562045                                25187 0 -     75513 C
e Eulemur_fulvus.k141_636316                                 54554 0 -     65740 C
e Eulemur_flavifrons.k141_433119                             44230 0 +     68309 C
e Eulemur_coronatus.k141_384460                              87667 0 +    112731 C
e Eulemur_collaris.k141_601111                               43697 0 -     70999 C
e Eulemur_albifrons.k141_51491                               15987 0 -     24895 C
e Condylura_cristata.JH655891.1                           35808250 0 +  53390261 C
e Cercocebus_torquatus.k141_2159127                          46000 59 -    148725 I
e Cercocebus_lunulatus.k141_2500334                           1616 59 -     14410 I
e Cercocebus_chrysogaster.k141_1522556                       46183 59 +     47900 I
e Cercocebus_atys.KQ010504.1                                142444 59 -   4669795 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6698  8 +     36723 A---T------T----A------------T---T---A------T
s Acinonyx_jubatus.LLWD01001279.1                           814124  5 +   1699592 -----------a----a------------t---t---a-------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27382  6 +     63021 A---T------T----G------------T---G-----------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416583  7 +  29979442 a---t------a----a------------t---t---a-------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216921  7 +    347723 a---t------a----a------------t---t---g-------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19761  6 -     61208 A---T------T----G------------T---A-----------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49343  8 +     53615 A---T------T----A------------T---T---A------T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1374  8 +     13857 A---T------T----A------------T---T---A------T
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17925  8 -     21945 A---T------T----A------------T---T---A------T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19610  8 +     32033 A---T------T----A------------T---T---A------T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73447  8 -     84148 A---T------T----A------------T---T---T------T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45686  8 -     78289 A---T------T----A------------T---T---T------T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45125  8 +     55831 A---T------T----A------------T---T---T------T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43575  8 -     64179 A---T------T----A------------T---T---T------T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            682  8 -      3959 A---T------T----A------------T---T---T------T
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42200  8 +     45454 A---T------T----A------------T---T---T------T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47849  8 +     70886 A---T------T----A------------T---T---T------T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10022  8 +     30854 A---T------T----A------------T---T---T------T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34156  8 +     42133 A---T------T----A------------T---T---T------T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586967  7 +   2318259 A---T------A----A------------T---T---G-------
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 6
s Anoura_caudifer.AnoCau_scaffold_1412                      178388 10 -    412891 A---T------T----AT--TA-------T---A---A-------
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52044  7 -     68529 A---T------A----A------------T---T---A-------
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 6
s Aotus_azarae.k141_887050                                    2414  8 +     17741 T---T------T----A------------T---T---T------T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3039  8 -     15923 A---T------T----A------------T---T---T------T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673321  8 +   5030052 a---t------t----a------------t---t---t------t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3315  8 -     16391 A---T------T----A------------T---T---T------T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2874  8 -     17186 A---T------T----A------------T---T---T------T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17389  5 -     32367 ----------------A------------T---T---A------T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21446  8 -     45910 A---T------T----A------------T---T---A------T
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6646 10 -     15198 A---T------T----AT--T-------at---a---a-------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275912  8 +  21539123 A---T------T----A------------T---T---T------T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12079  8 +     48076 A---T------T----A------------T---T---T------T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7214  8 -     28759 A---T------T----A------------T---T---T------T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34769  8 +     44353 A---T------T----A------------T---T---T------T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50139  8 -     71267 A---T------T----A------------T---T---T------T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24197  8 -     33135 A---T------T----A------------T---T---T------T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7478  8 +     11645 A---T------T----A------------C---T---A------T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7486  8 -     19611 A---T------T----A------------C---T---A------T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964729  6 -  23207421 ----T------A----A------------T---C---A-------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 6
s Balaenoptera_bonaerensis.DF411050.1                         1229  6 -     25979 ----T------A----A------------T---C---A-------
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 6
s Beatragus_hunteri.BeaHun_scaffold_7278                     87973  7 +    124022 A---T------A----A------------T---T---G-------
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 6
s Bison_bison.KN261452.1                                     23508  7 +    288883 a---t------a----a------------t---t---a-------
i Bison_bison.KN261452.1                                 C 0 I 6
s Bos_indicus.CM003047.1                                  20357898  7 +  48749331 a---t------a----a------------t---t---a-------
i Bos_indicus.CM003047.1                                 C 0 I 6
s Bos_mutus.JH880303.1                                      756462  7 +   1948126 a---t------a----a------------t---t---a-------
i Bos_mutus.JH880303.1                                   C 0 I 6
s Bos_taurus.CM000203.6                                   27546604  7 -  45695690 a---t------a----a------------t---t---a-------
i Bos_taurus.CM000203.6                                  C 0 I 6
s Bubalus_bubalis.KI419123.1                               1531612  7 -   4408762 a---t------a----a------------t---t---a-------
i Bubalus_bubalis.KI419123.1                             C 0 I 6
s Cacajao_ayresi.k141_96119                                   9006  8 +     28062 A---T------T----A------------T---T---A------T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44300  8 -     91139 A---T------T----A------------T---T---A------T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21826  8 +     95584 A---T------T----A------------T---T---A------T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21739  8 +    119600 A---T------T----A------------T---T---A------T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11394  8 +     18648 A---T------T----A------------T---T---T------T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10910  8 -     13885 A---T------T----A------------T---T---T------T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            2996  8 -      8861 A---T------T----A------------T---T---T------T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455388  8 + 189096842 A---T------T----A------------T---T---T------T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2911  8 +      8664 A---T------T----A------------T---T---T------T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632221  7 +  17673402 A---T------A----A------------T---T---A-------
i Camelus_bactrianus.KN276810.1                          C 0 I 6
s Camelus_dromedarius.KN272107.1                           4666508  7 +   7040546 A---T------A----A------------T---T---A-------
i Camelus_dromedarius.KN272107.1                         C 0 I 6
s Camelus_ferus.KB017975.1                                 1210166  7 +   1652518 A---T------A----A------------T---T---A-------
i Camelus_ferus.KB017975.1                               C 0 I 6
s CanFam4.chr16                                           42506480  7 +  60362399 a---t------a----a------------t---t---a-------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10116  7 -     23171 A---T------A----A------------T---T---A-------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223459  7 +   9314153 A---T------A----A------------T---t---a-------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616594  7 +  59632846 a---t------a----a------------t---t---a-------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108175  7 -  63665305 A---T------A----A------------T---t---a-------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410696  7 -  46296322 A---T------A----A------------T---T---G-------
i Capra_aegagrus.CM003241.1                              C 0 I 6
s Capra_hircus.CM004588.1                                 26592970  7 +  44709034 A---T------A----A------------T---T---G-------
i Capra_hircus.CM004588.1                                C 0 I 6
s Capromys_pilorides.CapPil_scaffold_762519                    711 11 -      1607 A---T------AACA-A------------T---A---A------T
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271696  8 +    496798 a---t------t----a------------t---t---a------t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1516 10 +      9923 A---T------T----AT--T---G----t---a---a-------
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28881  5 -     39886 a---t------a----a------------t---------------
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80796  7 -    217609 A---A------A----A------------T---T---A-------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 6
s Cavia_aperea.AVPZ01000300.1                              4997611  5 +  23392119 ----------------a------------t---a---a------t
i Cavia_aperea.AVPZ01000300.1                            I 3 C 0
s Cavia_porcellus.DS562891.1                               5001053  5 +  23407841 ----------------a------------t---a---a------t
i Cavia_porcellus.DS562891.1                             I 3 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64132  5 -     66877 ----------------a------------t---a---a------t
i Cavia_tschudii.CavTsc_scaffold_23560                   I 3 C 0
s Cebuella_niveiventris.k141_592277                           6309  8 -     12580 A---T------T----A------------T---T---T------T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44367  8 +     53515 A---T------T----A------------T---T---T------T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374135  8 -  26074798 A---T------T----A------------T---T---T------T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9189  8 -     34880 A---T------T----A------------T---T---T------T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68285  8 -     89041 A---T------T----A------------T---T---T------T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3657  8 -      5494 A---T------T----A------------T---T---A------T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493415  7 -  27778364 a---t------a----a------------t---t---a-------
i Ceratotherium_simum.JH767749.1                         C 0 I 6
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20248  7 +     27315 A---T------A----A------------T---T---A-------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 6
s Cercopithecus_ascanius.k141_3120866                        28257  8 -     40656 A---T------T----A------------T---T---A------T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8221  8 +     20796 A---T------T----A------------T---T---A------T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13339  4 -     17524 A---T------T----A----------------------------
i Cercopithecus_diana.k141_132293                        C 0 I 1
s Cercopithecus_hamlyni.k141_566925                          29062  8 -     34525 A---T------T----A------------T---T---A------T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12842  8 -     25376 A---T------T----A------------T---T---A------T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365429  8 -  39242232 A---T------T----A------------T---T---A------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271156  8 +  21565898 A---T------T----A------------T---T---G------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33524  8 -     45857 A---T------T----A------------T---T---A------T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28425  8 -     32606 A---T------T----A------------T---T---A------T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4587  8 +      8499 A---T------T----A------------T---T---A------T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26983  8 +     70610 A---T------T----A------------T---T---A------T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23944  8 +     36323 A---T------T----A------------T---T---A------T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13861  4 -     19938 -----------------------------T---T---A------T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 1 C 0
s Cheirogaleus_major.k141_666340                             31851 11 -     33796 A---T------T----A------------TTATT---A------T
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6365 11 -     15404 A---T------T----A------------TTATT---A------T
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10114  8 -     32913 A---T------T----A------------T---T---A------T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20527  8 -     40346 A---T------T----A------------T---T---A------T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20782  8 +    216457 A---T------T----A------------T---T---A------T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20571  8 +     39636 A---T------T----A------------T---T---A------T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239939 11 -   2543920 a---c------aaca-a------------c---a---a------t
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            234  8 +      1057 A---T------T----A------------T---T---T------C
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43637  8 -    112038 A---T------T----A------------T---T---A------T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9188  8 +     34062 A---T------T----A------------T---T---A------T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344845  8 +  18827391 A---T------T----A------------T---T---A------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11387  5 -     44032 A---T------T----A------------T---------------
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306170  8 - 135778131 a---t------t----a------------t---t---a------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  107  8 +     10270 A---T------T----G------------C---T---G------T
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607583  8 -    839153 A---T------T----G------------C---T---G------T
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_4313612                16  8 +       302 A---T------T----A------------C---T---G------t
i Chrysochloris_asiatica.ChrAsi_scaffold_4313612         C 0 C 0
s Colobus_angolensis.KN981557.1                             410576  8 -   2368649 a---t------t----a------------t---t---a------t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380457  8 - 200372422 A---T------T----A------------T---T---A------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4014  8 -     84244 A---T------T----A------------T---T---A------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3988  7 -      8242 A---T------A----A------------T---A---G-------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46060  6 -     83289 A---T------T----G------------T---G-----------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117754  6 - 224834208 A---T------T----G------------T---G-----------
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              11009  5 +     12657 T---A------A----A------------T---------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5575  7 +     87169 a---t------a----a------------t---t---a-------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646614  8 -   1526836 A---T------A----A------------T---A---A------T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19786  2 +     50838 -------------------------------------A------T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 6 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5522  5 +     36344 ----------------a------------t---a---a------t
i Cuniculus_paca.CunPac_flattened_line_7025              I 3 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29306  5 +     75252 ----------------a------------t---a---a------t
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 3 C 0
s Dasypus_novemcinctus.JH564415.1                          2111213  8 -   2246927 a---t------a----a------------t---t---a------c
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293772  8 +  12879189 A---T------T----A------------T---T---A------T
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633135  6 -  35494412 ----T------A----A------------T---C---A-------
i Delphinapterus_leucas.KZ290073.1                       C 0 I 6
s Desmodus_rotundus.KZ672289.1                            11866502 13 -  20541912 A---T------TGTT-AT--TA-------G---A---A-------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665688  7 -   1390856 a---t------a----a------------t---t---a-------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 6
s Diceros_bicornis.DicBicMic_scaffold_5955                  140487  7 -    198055 A---T------a----a------------t---t---a-------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 6
s Dinomys_branickii.DinBra_scaffold_10381                   100012 11 -    115145 A---C------ACCA-A------------C---A---A------C
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951782  8 -  37912305 A---T------T----A------------T---G---G------T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6716  8 -     10735 A---T------T----A------------T---T---G------T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856733  8 - 111700974 G---T------T----G------------C---T---A------T
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226946  1 +  10337057 --------------------------------------------a
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7481  7 +     19438 a---t------a----a------------t---a---g-------
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241324  7 -    607251 a---t------a----a------------t---t---a-------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 6
s Ellobius_lutescens.LOEQ01008920.1                          33608  6 +    110024 A---T------T----G------------T---G-----------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15611  6 +     18970 A---T------T----G------------T---G-----------
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917324  7 +  41312741 a---t------a----a------------t---t---a-------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580102  3 +  14770903 -----------------------------t---a---a-------
i Eptesicus_fuscus.JH977646.1                            I 8 C 0
s Equus_asinus.JREZ01000139.1                              3042632  7 -   4378816 a---t------t----a------------t---t---g-------
i Equus_asinus.JREZ01000139.1                            C 0 I 6
s Equus_caballus.CM000403.2                               21376570  7 +  39960074 a---t------t----a------------t---t---g-------
i Equus_caballus.CM000403.2                              C 0 I 6
s Equus_przewalskii.KK951119.1                              412552  7 -    498745 a---t------t----a------------t---t---g-------
i Equus_przewalskii.KK951119.1                           C 0 I 6
s Erinaceus_europaeus.JH835339.1                           3667368  5 +   7059049 A---T------A----A------------C---------------
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264381  8 +  21539334 A---T------T----A------------T---T---A------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72343  6 -    133382 ----T------A----A------------T---C---A-------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 6
s Eubalaena_japonica.EubJap_flattened_line_57114                56  6 +     25849 ----T------A----A------------T---C---A-------
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 I 6
s Eulemur_albifrons.k141_51491                               15987  6 -     24895 -----------T----A------------T---T---A------T
i Eulemur_albifrons.k141_51491                           C 0 I 3
s Eulemur_collaris.k141_601111                               43697  6 -     70999 -----------T----A------------T---T---A------T
i Eulemur_collaris.k141_601111                           C 0 I 3
s Eulemur_coronatus.k141_384460                              87667  6 +    112731 -----------T----A------------T---T---A------T
i Eulemur_coronatus.k141_384460                          C 0 I 3
s Eulemur_flavifrons.k141_433119                             44230  6 +     68309 -----------T----A------------T---T---A------T
i Eulemur_flavifrons.k141_433119                         C 0 I 3
s Eulemur_fulvus.k141_636316                                 54554  6 -     65740 -----------T----A------------T---T---A------T
i Eulemur_fulvus.k141_636316                             C 0 I 3
s Eulemur_macaco.k141_1562045                                25187  6 -     75513 -----------T----A------------T---T---A------T
i Eulemur_macaco.k141_1562045                            C 0 I 3
s Eulemur_mongoz.k141_232305                                 49381  6 -     97555 -----------T----A------------T---T---A------T
i Eulemur_mongoz.k141_232305                             C 0 I 3
s Eulemur_rubriventer.k141_1423786                            6105  6 +     30972 -----------T----A------------T---T---A------T
i Eulemur_rubriventer.k141_1423786                       C 0 I 3
s Eulemur_rufus.k141_514691                                  43825  6 -     52037 -----------T----A------------T---T---A------T
i Eulemur_rufus.k141_514691                              C 0 I 3
s Eulemur_sanfordi.k141_1122526                              60228  6 -    111500 -----------T----A------------T---T---A------T
i Eulemur_sanfordi.k141_1122526                          C 0 I 3
s Felis_catus.CM001381.2                                 186248034  5 - 206538554 -----------a----a------------t---t---a-------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117820  5 - 205367284 -----------a----a------------t---t---a-------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28920  5 -     30238 -----------A----A------------T---T---A-------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923157 11 -   3816255 a---c------aaca-a------------t---a---a------t
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126810  8 -    137831 A---T------T----A------------T---T---A------T
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10355  8 +     22493 A---T------T----A------------T---T---A------T
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22438  8 -     32986 A---T------T----A------------T---T---a------t
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2375  8 -     28519 A---T------T----A------------T---T---A------T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93041  7 -     95226 A---T------A----A------------T---T---A-------
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 6
s Glis_glis.GliGli_scaffold_163929                            2516  8 -      6791 A---T------T----A------------T---T---A------T
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               7007  8 -      8343 A---T------T----A------------T---T---a------t
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                256014  8 - 186649187 a---t------t----a------------t---t---a------t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3582  8 -     78134 T---T------T----A------------T---T---A------T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15912  6 -     40692 -----------T----A------------T---T---A------T
i Hapalemur_alaotrensis.k141_330369                      C 0 I 3
s Hapalemur_gilberti.k141_646465                             37311  6 +     49394 -----------T----A------------T---T---A------T
i Hapalemur_gilberti.k141_646465                         C 0 I 3
s Hapalemur_griseus.k141_763500                              62182  6 -     66874 -----------T----A------------T---T---A------T
i Hapalemur_griseus.k141_763500                          C 0 I 3
s Hapalemur_meridionalis.k141_258450                         11053  6 -     42923 -----------T----A------------T---T---A------T
i Hapalemur_meridionalis.k141_258450                     C 0 I 3
s Hapalemur_occidentalis.k141_578367                         18055  6 -     53142 -----------T----A------------T---T---A------T
i Hapalemur_occidentalis.k141_578367                     C 0 I 3
s Helogale_parvula.HelPar_flattened_line_2585                32008  7 -    327341 a---t------a----a------------t---t---a-------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10707  7 +     48891 A---T------A----A------------T---T---G-------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 6
s Heterocephalus_glaber.JH602082.1                         1933576 11 -  22651954 a---c------aata-a------------t---a---a------t
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1445  9 +      8654 A---TATTAAAC---------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8849  6 -     36432 ----T------A----A------------T---T---A-------
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 6
s Hipposideros_armiger.JXIK01000431.1                      1552831  7 -   1711038 a---t------a----a------------t---t---g-------
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2268  7 -      2730 A---T------A----A------------T---T---G-------
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144014  8 -    630532 A---T------T----A------------T---T---a------t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71386  4 +     83186 a---t------a----a----------------------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73010  5 +    143317 ----------------g------------t---a---a------t
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3 C 0
s Hylobates_agilis.k141_1155965                               7059  8 +     12352 A---T------T----A------------T---T---a------t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14243  8 +     55766 A---T------T----A------------T---T---a------t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053843  8 + 191637585 A---T------T----A------------T---T---a------t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802721  8 +  11177569 A---T------T----A------------T---T---a------t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8329  8 -    135385 G---C------A----A------------T---a---a------t
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388054  8 +   7955117 a---t------t----a------------t---t---a------t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3621  8 +     11955 A---T------T----A------------T---T---A------T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11238  6 -     16823 ----T------A----A------------T---C---A-------
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 6
s Jaculus_jaculus.JH725527.1                               1241242  6 +   9596543 A---T------T----G------------T---A-----------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73078  6 -     97402 ----T------A----A------------C---C---A-------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 6
s Lagothrix_lagothricha.k141_246028                          44463  8 +    110728 A---T------T----A------------T---T---T------T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64400  3 -     65777 -----------------------------T---C---A-------
i Lasiurus_borealis.LasBor_scaffold_16567                I 12 C 0
s Lemur_catta.scaffold_24                                 14760709  6 +  30322482 -----------T----A------------T---T---A------T
i Lemur_catta.scaffold_24                                C 0 I 3
s Leontocebus_fuscicollis.k141_2994775                        5370  8 -     13097 A---T------T----A------------T---T---T------C
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5124  8 +      5940 A---T------T----A------------T---T---T------C
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4947  8 -      5717 A---T------T----A------------T---T---T------T
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11333  8 -     11567 A---T------T----A------------T---T---T------T
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12714  8 -     12945 A---T------T----A------------T---T---T------T
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10226  8 +     29618 A---T------T----A------------T---T---A------T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10222  8 +     31569 A---T------T----A------------T---T---A------T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10232  8 +     24756 A---T------T----A------------T---T---A------T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10232  8 +     16388 A---T------T----A------------T---T---A------T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814711  7 -   3914936 a---t------a----a------------t---t---a-------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     19272  8 +     24238 g---a------t----a------------t---t---a------c
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342423  6 +    662738 ----T------A----A------------T---C---A-------
i Lipotes_vexillifer.KE559953.1                          C 0 I 6
s Loris_lydekkerianus.k141_2031736                           12522  8 +     19643 A---T------T----A------------T---T---A------T
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046192  8 -   6120653 A---T------T----A------------T---T---A------T
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086115  3 +  43346337 a---t------t---------------------------------
i Loxodonta_africana.GL010049.1                          C 0 I 2
s Lycaon_pictus.CM007581.1                                41615749  7 +  59628241 a---t------a----a------------t---t---a-------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224459  7 -    270270 a---t------a----a------------t---a---g-------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Manis_javanica.JSZB01003497.1                             674755 10 -    737560 a---t------t----a------------t---tttaa-------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222055 10 +    317179 a---t------t----a------------t---tttaa-------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502268  8 +  40650429 a---t------t----a------------t---t---a------t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151614 10 +    207569 C---T------A----CTA---------CT---A---C-------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27439  7 -     74585 a---t------a----a------------t---t---a-------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52024  6 -    140813 A---T------C----A------------T---G-----------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88707  6 +     93471 ----T------A----A------------T---C---A-------
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 6
s Mico_argentatus.k141_582562                                11492  8 +     17804 A---T------T----A------------T---T---T------T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              11992  8 -     12984 A---T------T----A------------T---T---T------T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20311  8 -     26561 A---T------T----A------------T---T---T------T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986064  8 +  93316391 -------------------------------------attattat
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47906  8 +    145209 G---T------T----C------------C---T---A------T
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186298  4 +    200668 a---t------a----a----------------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 3
s Microtus_ochrogaster.CM001695.1                         15965057  6 +  27267610 A---T------T----G------------T---G-----------
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364443 16 -   8254450 a---c------t----a---taataataat---a---c-------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43353 19 -     48117 A---C------T----ATAATAATGATAAT---A---C-------
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23873  8 -     27822 A---T------T----A------------T---T---A------T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9722  7 +     27589 A---T------A----A------------T---T---A-------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53846  2 -     62432 -------------------------------------A------T
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360812  6 +    437263 ----T------A----A------------T---C---A-------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 6
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180533 10 +    366855 A---T------T----AT--TA-------T---G---A-------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Moschus_moschiferus.MosMos_scaffold_13123                  27152  7 -     82753 A---T------A----A------------T---T---A-------
i Moschus_moschiferus.MosMos_scaffold_13123              I 3 I 6
s Mungos_mungo.MunMun_flattened_line_18455                   19742  7 -     63510 A---T------A----A------------T---t---a-------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40374 15 +     47283 ----T------A----ATAAAAAT--TA-T---A---A-------
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85426  2 -     86153 -------------------------------------A------T
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 3 C 0
s Mus_caroli.LT608237.1                                   35596227  6 + 120012414 A---A------T----G------------T---G-----------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689424  6 + 129401213 A---A------T----G------------T---G-----------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217766  6 +  89631738 C---A------T----G------------T---G-----------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498709  6 + 130317789 A---A------T----G------------T---G-----------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Mustela_putorius.JH418006.1                             14356345  7 +  14710649 a---t------a----a------------t---t---a-------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64295 11 +     67721 A---T------AACa-a------------t---a---a------t
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794654 15 +  10118263 ----t------a----a---taattgttat---a---a-------
i Myotis_brandtii.KE162005.1                             I 1 C 0
s Myotis_davidii.KB100139.1                                4388827 19 +   6019432 ataat------a----a---taactgttat---a---a-------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384853 19 +   4330536 ataat------a----a---taattgttat---a---a-------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3654  3 +     18357 -----------------------------T---A---A-------
i Myotis_myotis.MyoMyo_scaffold_66571                    I 9 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              120994  8 +    130748 A---T------T----C------------C---T---a------t
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947925  6 +   3037898 A---T------T----G------------C---G-----------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30601  8 +     34575 A---T------T----A------------T---T---A------T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233478  6 -   7148211 ----T------A----A------------T---C---A-------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 6
s Noctilio_leporinus.NocLep_scaffold_7894                   129143 10 -    149072 A---T------T----AT--TA-------T---A---C-------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54945  8 -    132029 A---T------T----A------------T---T---a------t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11040  8 -     16345 A---T------T----A------------T---T---a------t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16925  8 +     22201 A---T------T----A------------T---T---a------t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415146  8 -  22158432 A---T------T----A------------T---T---a------t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27323  8 -     54323 A---T------T----A------------T---T---a------t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199348  7 +   9404916 a---t------a----a------------t---t---a-------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639420  3 + 196305487 ---------------------------------T---A------T
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_1296080                             2023  3 -      9413 ---------------------------------T---A------T
i Nycticebus_coucang.k141_1296080                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566803  3 - 199412804 ---------------------------------T---A------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 1 C 0
s Ochotona_princeps.JH802162.1                             2558113  8 -   3988456 G---T------T----A------------T---T---A------T
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056385 11 -  11899542 a---c------aaca-a------------t---a---a------t
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453137 10 +   2017862 A---T------A----ACA-----G----T---T---A-------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437932  7 -    630418 a---t------a----a------------t---t---a-------
i Odocoileus_virginianus.KZ100018.1                      C 0 I 6
s Okapia_johnstoni.LVCL01S0005463.1                          16123  7 +    150152 A---T------A----A------------T---T---A-------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 6
s Ondatra_zibethicus.OndZib_scaffold_7387                    95730  6 -    140218 A---T------T----A------------T---G-----------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6273  6 -     41509 A---T------T----G------------T---G-----------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103880  6 +  10937097 ----T------A----A------------T---C---A-------
i Orcinus_orca.KB316932.1                                C 0 I 6
s Orycteropus_afer.OryAfe_flattened_line_201229               1178  8 +     11607 A---T------T----A------------T---T---a------t
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 I 2
s Oryctolagus_cuniculus.CM000791.1                       107105953  8 - 174332312 g---a------t----a------------t---t---a------c
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40391  7 +    559221 a---t------a----a------------t---t---a-------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41970  8 -     51505 A---T------T----A------------T---T---A------T
i Otolemur_crassicaudatus.k141_649260                    C 0 I 2
s Otolemur_garnettii.GL873799.1                             354974  8 +   1103335 a---t------t----a------------t---t---a------t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405834  7 -  44047080 A---T------A----A------------T---T---G-------
i Ovis_aries.CM001607.2                                  C 0 I 6
s Ovis_canadensis.OviCan_scaffold_67953                       6353  7 +     17875 A---T------A----A------------T---T---G-------
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 6
s Pan_troglodytes.CM009242.2                               1474042  8 - 189151597 a---t------t----a------------t---t---a------t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25743  5 -    230217 -----------a----a------------t---t---a-------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463069  5 -  18783137 -----------a----a------------t---t---a-------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973728  5 +   8748460 -----------a----a------------t---t---a-------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617359  7 +   2937107 A---T------A----A------------T---T---G-------
i Pantholops_hodgsonii.KE114653.1                        C 0 I 6
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16323  7 +     78924 a---t------a----a------------t---t---a-------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28301  8 +     31479 A---T------T----A------------T---T---A------T
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20669  8 -     24908 A---T------T----A------------T---T---A------T
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3124  8 +      9367 A---T------T----A------------T---T---G------T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249496  6 +  18517816 A---T------T----G------------T---G-----------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33162 11 -     56120 A---C------AAAA-A------------G---A---A------C
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5406  6 -     63832 ----T------A----A------------T---C---A-------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 6
s Piliocolobus_badius.k141_2704958                            3964  8 +     55023 A---T------T----A------------T---T---A------T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5237  3 +     22231 -----------------------------T---A---A-------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 5 C 0
s Pithecia_albicans.k141_1239476                             66005  8 +    207309 A---T------T----a------------t---t---a------t
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7093  8 -     25401 A---T------T----a------------t---t---a------t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32841  8 +     58159 A---T------T----a------------t---t---a------t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33117  8 +     63561 A---T------T----a------------t---t---a------t
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32877  8 +     51148 A---T------T----a------------t---t---a------t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557847  8 -   4542175 A---T------T----a------------t---t---a------t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32861  8 +     51125 A---T------T----a------------t---t---a------t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2423  6 +     19503 ----T------A----A------------T---C---A-------
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 6
s Plecturocebus_bernhardi.k141_2549090                        9279  8 +     39866 A---T------T----A------------T---T---A------T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4361  8 -      9282 A---T------T----A------------T---T---A------T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43765  8 -     87950 A---T------T----A------------T---T---A------T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44159  8 -     88961 A---T------T----A------------T---T---A------C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8857  8 -     39403 A---T------T----A------------T---T---A------T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43808  8 +     87928 A---T------T----A------------T---T---A------T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8856  8 -     60166 A---T------T----A------------T---T---A------T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15793  8 -     67232 A---T------T----A------------T---T---A------T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43709  8 -     90634 A---T------T----A------------T---T---A------T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45176  8 +     89403 A---T------T----A------------T---T---A------T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179155  8 - 189387572 a---t------t----a------------t---t---a------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193972  8 -   9816681 A---T------T----A------------T---T---A------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29112  8 +     69807 A---T------T----A------------T---T---A------T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46293  8 -     80239 A---T------T----A------------T---T---A------T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5436  9 +      7663 A---TATTAAAC---------------------------------
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 2
s Prolemur_simus.MPIZ01000396.1                            1983857  6 +   4620579 -----------t----a------------t---t---a------t
i Prolemur_simus.MPIZ01000396.1                          C 0 I 3
s Propithecus_coquerelli.NW_012148875.1                    1567372  8 -   2598838 A---T------T----A------------T---T---A------T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5010  8 -      7103 A---T------T----A------------T---T---A------T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5607  8 -     11706 A---T------T----A------------T---T---A------T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9344  8 -     30655 A---T------T----A------------T---T---A------T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35658  8 +     46564 A---T------T----A------------T---T---A------T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95937  8 -     98465 A---T------T----A------------T---T---A------T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9576  8 +     35169 A---T------T----A------------T---T---A------T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39547  6 +     52041 A---T------C----A------------T---G-----------
i Psammomys_obesus.NESX01036366.1                        C 0 I 1
s Pteronotus_parnellii.KE847780.1                            53424 10 -     66298 a---t------t----a---------ttat---t---a-------
i Pteronotus_parnellii.KE847780.1                        C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5917  7 -     18639 A---T------A----A------------T---T---A-------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842030  7 -  28871421 a---t------a----a------------t---a---g-------
i Pteropus_alecto.KB030862.1                             I 2 C 0
s Pteropus_vampyrus.KN525825.1                             3538545  7 -   4952924 a---t------a----a------------t---a---g-------
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100383  5 +  38429054 -----------a----a------------t---t---a-------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28547  8 +     91421 A---T------T----A------------T---T---A------T
i Pygathrix_cinerea.k141_1153803                         I 68 C 0
s Pygathrix_nigripes_b.ctg100                                  155099  8 -   7812017 A---T------T----A------------T---T---A------T
i Pygathrix_nigripes_b.ctg100                               I 136 C 0
s Pygathrix_nigripes_a.k141_215492                              9404  8 +     72585 A---T------T----A------------T---T---A------T
i Pygathrix_nigripes_a.k141_215492                         I 68 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54847  7 +     55069 A---T------A----A------------T---T---A-------
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 I 6
s Rhinolophus_sinicus.LVEH01000134.1                       2915996  7 +   3329780 a---t------a----a------------c---a---a-------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3066  8 +      7119 A---T------T----A------------T---T---A------T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123681  8 + 195417433 a---t------t----a------------t---t---a------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237908  8 -   7961872 A---T------T----A------------T---T---A------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76530  7 -    116970 a---t------a----a------------t---a---g-------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                234  8 -      1130 A---T------T----A------------T---T---T------C
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5136  8 +      6077 A---T------T----A------------T---T---T------C
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5229  8 +      5971 A---T------T----A------------T---T---T------C
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5147  8 +      5932 A---T------T----A------------T---T---T------C
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3492  8 -      4390 A---T------T----A------------T---T---T------C
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393249  8 - 209938924 A---T------T----A------------T---T---T------C
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5095  8 +      5979 A---T------T----A------------T---T---T------C
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1665  8 -     22275 A---T------T----A------------T---T---T------C
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9522  7 +     16473 A---T------A----A------------T---T---G-------
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 6
s Saimiri_boliviensis.NW_024100920.1                       1110259  8 + 121099817 a---a------t----a------------t---t---t------t
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31826  8 -     47369 A---A------T----A------------T---T---T------T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32212  8 -     79414 A---A------T----A------------T---T---T------T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28903  8 -     34454 A---A------T----A------------T---T---T------T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16304  8 -     22428 A---A------T----A------------T---T---T------T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31458  8 -     47109 A---A------T----A------------T---T---T------T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239509  8 +   5703754 A---T------T----A------------T---T---T------T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9099  8 +     21866 A---T------T----A------------T---T---T------T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_johnii.k141_843753                           16880  8 -     45317 A---T------T----A------------T---T---A------T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24538  8 -     42441 A---T------T----A------------T---T---A------T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27216  8 -     29113 A---T------T----A------------T---T---A------T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30291  8 -     48123 A---T------T----A------------T---T---A------T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51293  6 +     77746 A---T------T----G------------T---G-----------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865414  5 -   1910179 a---t------a----a------------t---------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672510  5 +  18376816 T---A------A----A------------T---------------
i Sorex_araneus.JH798187.1                               C 0 I 9
s Spermophilus_dauricus.KZ294078.1                         1869632  8 +   3870691 a---t------t----a------------t---t---a------t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              7996  4 -     97271 a---t------a----a----------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126159  7 +    196729 a---t------a----a------------t---t---a-------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645193  7 +  69701581 A---T------G----A------------T---T---A-------
i Sus_scrofa.CM000828.4                                  C 0 I 6
s Symphalangus_syndactylus.tarseq_199                       392411  8 +   1523678 A---T------T----A------------T---T---a------t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15578 16 +     22964 a---t------t----g---ttattattat---a---a-------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3986  8 +      5583 A---T------T----C------------T---T---a------t
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192877  7 +    199430 A---T------a----a------------t---t---a-------
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 6
s Tapirus_terrestris.TapTer_scaffold_755                    106845  7 -    539355 A---T------T----a------------t---t---a-------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 6
s Tarsius_lariang.k141_1733899                                1922  8 +      9917 A---T------T----A------------T---T---A------T
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8720  8 +     20590 A---T------T----A------------T---T---A------T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25315 11 -     33621 A---C------AA-Aaa------------c---a---a------c
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20943  8 -     31044 A---T------T----A------------T---T---A------T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481425 10 -    610378 A---G------T----GT--T-------at---a---a-------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22347  8 +     26378 A---T------T----A------------T---T---A------T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35023  8 -     78344 A---T------T----A------------T---T---A------T
i Trachypithecus_crepusculus.k141_539312                 C 0 I 68
s Trachypithecus_cristatus.k141_180416                       21672  8 +     25722 A---T------T----A------------T---T---A------T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30047  8 -     62838 A---T------T----A------------T---T---A------T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30091  8 +     46913 A---T------T----A------------T---T---A------T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10830  8 -     28527 A---T------T----A------------T---T---A------T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31982  8 -     64340 A---T------T----A------------T---T---A------T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30020  8 -     63452 A---T------T----A------------T---T---A------T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11467  8 +     22490 A---T------T----A------------T---T---A------T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4890  8 -      6147 A---T------T----A------------T---T---A------T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11803  8 -     13050 A---T------T----A------------T---T---A------T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256965  8 -   6242583 A---T------T----A------------T---T---A------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3061  8 +     19340 A---T------T----A------------T---T---A------T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175136  4 -    200418 ----------------G------------T---T---A-------
i Tragulus_javanicus.TraJav_scaffold_3462                I 1 I 6
s Trichechus_manatus.JH594705.1                            6482810  3 -  10818551 A---T------T---------------------------------
i Trichechus_manatus.JH594705.1                          C 0 I 2
s Tupaia_chinensis.KB320699.1                              1835627  8 -   4065304 A---T------T----A------------T---T---G------T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                       9648  8 -     70247 A---T------T----A------------T---T---G------T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367005  6 -  33153633 ----T------A----A------------T---C---A-------
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 6
s Uropsilus_gracilis.UroGra_scaffold_46687                    4811  5 -     21056 A---T------G----A------------T---------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183360  7 +   5085361 a---t------a----a------------t---t---a-------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26513  6 -     30710 -----------T----A------------T---T---A------T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25420  6 -    147434 -----------T----A------------T---T---A------T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77555  7 +   5488506 A---T------A----A------------T---T---A-------
i Vicugna_pacos.KN270157.1                               C 0 I 6
s Vulpes_lagopus.VulLag_flattened_line_12041                106114  7 -    112863 A---T------A----A------------T---T---A-------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175388  8 -    224448 A---T------T----A------------T---T---A------T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30349 10 -     86975 A---T------A----ACA-----G----T---T---A-------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1202  6 -      1899 A---T------T----A------------T---A-----------
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Theropithecus_gelada.CM009954.1                           354612 59 - 186847797 I
e Semnopithecus_hypoleucos.k141_1910531                      30309 150 +     58920 I
e Semnopithecus_entellus.k141_158471                         26797 65 +     27374 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955  0 +    313613 C
e Rattus_norvegicus.chr16                                 37024043 457 -  90668790 I
e Piliocolobus_tephrosceles.PDMG02000141.1                  255762 85 +  14605196 I
e Piliocolobus_kirkii.k141_1310104                            4087 85 +     40849 I
e Piliocolobus_gordonorum.k141_381342                         3497 85 -     89929 I
e Papio_ursinus.k141_5784434                                   367 59 -     10386 I
e Papio_papio.k141_3538738                                     407 59 +     10553 I
e Papio_kindae.k141_2214839                                  23736 59 -     27687 I
e Papio_hamadryas.Contig39                                  293831 59 -  20919399 I
e Papio_cynocephalus.k141_1507553                            11088 59 +     21308 I
e Papio_anubis.CM001495.2                                   244803 59 - 183742232 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Mandrillus_sphinx.Contig270                               358625 59 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        323794 59 +  24302211 I
e Macaca_tonkeana.k141_339739                                 4304 59 +     17132 I
e Macaca_thibetana.k99_45532                                  1144 59 -      5049 I
e Macaca_silenus.Contig273                                  272506 59 +    668171 I
e Macaca_siberu.k141_2185972                                 46598 59 +     59329 I
e Macaca_radiata.k141_2139468                                 2657 59 +     14901 I
e Macaca_nigra.k141_2818840                                  50126 59 -     62418 I
e Macaca_nemestrina.KQ007038.1                              400954 59 +  25927173 I
e Macaca_mulatta.NC_041758.1                                416724 59 - 187317192 I
e Macaca_maura.k141_1103459                                  47521 59 +     51645 I
e Macaca_leonina.k141_321385                                 37777 59 -     50087 I
e Macaca_fuscata.k119_546792                                 26601 59 +     30527 I
e Macaca_fascicularis.k141_1617581                            1486 59 -      5035 I
e Macaca_cyclopis.k119_263443                                26648 59 +     30207 I
e Macaca_assamensis.Contig5                                 374380 59 -  60120075 I
e Macaca_arctoides.k141_1757516                              46718 59 -     61512 I
e Lophocebus_aterrimus.ctg367                               335329 59 -   1826925 I
e Condylura_cristata.JH655891.1                           35808250  0 +  53390261 C
e Cercocebus_torquatus.k141_2159127                          46000 59 -    148725 I
e Cercocebus_lunulatus.k141_2500334                           1616 59 -     14410 I
e Cercocebus_chrysogaster.k141_1522556                       46183 59 +     47900 I
e Cercocebus_atys.KQ010504.1                                142444 59 -   4669795 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6706  5 +     36723 GG---T---------------TG
s Acinonyx_jubatus.LLWD01001279.1                           814129  3 +   1699592 -----a---------------ag
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27388  4 +     63021 -A---T---------------TG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416590  3 +  29979442 -----a---------------tg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216928  3 +    347723 -----a---------------tg
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19767  4 -     61208 -A---C---------------Tg
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49351  5 +     53615 AC---T---------------TG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1382  5 +     13857 AC---T---------------TG
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17933  5 -     21945 AC---T---------------TG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19618  5 +     32033 AC---T---------------TG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73455  5 -     84148 AG---T---------------Tg
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45694  5 -     78289 AG---T---------------Tg
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45133  5 +     55831 AG---T---------------Tg
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43583  5 -     64179 AG---T---------------Tg
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            690  5 -      3959 AG---T---------------Tg
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42208  5 +     45454 AG---T---------------Tg
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47857  5 +     70886 AG---T---------------Tg
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10030  5 +     30854 AG---T---------------Tg
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34164  5 +     42133 AG---T---------------Tg
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586980  3 +   2318259 -----T---------------CA
i Ammotragus_lervia.NIVO01071767.1                       I 6 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178398  3 -    412891 -----T---------------Tg
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52057  3 -     68529 -----T---------------CA
i Antilocapra_americana.AntAmePen_scaffold_21030         I 6 C 0
s Aotus_azarae.k141_887050                                    2422  5 +     17741 AG---T---------------Tg
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3047  5 -     15923 AG---T---------------Tg
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673329  5 +   5030052 ag---t---------------tg
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3323  5 -     16391 AG---T---------------Tg
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2882  5 -     17186 AG---T---------------Tg
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17394  5 -     32367 GA---A---------------Tg
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21454  5 -     45910 TA---T---------------Tg
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6656  3 -     15198 -----t---------------tg
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275920  5 +  21539123 AG---T---------------Tg
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12087  5 +     48076 AG---T---------------Tg
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7222  5 -     28759 AG---T---------------Tg
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34777  5 +     44353 AG---T---------------Tg
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50147  5 -     71267 AG---T---------------Tg
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24205  5 -     33135 AG---T---------------Tg
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964741  3 -  23207421 -----t---------------tg
i Balaenoptera_acutorostrata.KI537508.1                  I 6 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1241  3 -     25979 -----t---------------tg
i Balaenoptera_bonaerensis.DF411050.1                    I 6 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87986  3 +    124022 -----t---------------ca
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 6 C 0
s Bison_bison.KN261452.1                                     23521  3 +    288883 -----t---------------ca
i Bison_bison.KN261452.1                                 I 6 C 0
s Bos_indicus.CM003047.1                                  20357911  3 +  48749331 -----t---------------ca
i Bos_indicus.CM003047.1                                 I 6 C 0
s Bos_mutus.JH880303.1                                      756475  3 +   1948126 -----t---------------ca
i Bos_mutus.JH880303.1                                   I 6 C 0
s Bos_taurus.CM000203.6                                   27546617  3 -  45695690 -----t---------------ca
i Bos_taurus.CM000203.6                                  I 6 C 0
s Bubalus_bubalis.KI419123.1                               1531625  3 -   4408762 -----t---------------ca
i Bubalus_bubalis.KI419123.1                             I 6 C 0
s Avahi_laniger.k141_2756659                                  7486  2 +     11645 TA---------------------
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7494  2 -     19611 TA---------------------
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9014  5 +     28062 AG---T---------------Tg
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44308  5 -     91139 AG---T---------------Tg
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21834  5 +     95584 AG---T---------------Tg
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21747  5 +    119600 AG---T---------------Tg
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11402  5 +     18648 AG---T---------------Tg
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10918  5 -     13885 AG---T---------------Tg
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3004  5 -      8861 AG---T---------------Tg
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455396  5 + 189096842 AG---T---------------TG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2919  5 +      8664 AG---T---------------Tg
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632234  3 +  17673402 -----T---------------TA
i Camelus_bactrianus.KN276810.1                          I 6 C 0
s Camelus_dromedarius.KN272107.1                           4666521  3 +   7040546 -----T---------------TA
i Camelus_dromedarius.KN272107.1                         I 6 C 0
s Camelus_ferus.KB017975.1                                 1210179  3 +   1652518 -----T---------------TA
i Camelus_ferus.KB017975.1                               I 6 C 0
s CanFam4.chr16                                           42506487  3 +  60362399 -----a---------------tg
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10123  3 -     23171 -----A---------------TG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223466  3 +   9314153 -----a---------------tg
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616601  3 +  59632846 -----a---------------tg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108182  3 -  63665305 -----a---------------tg
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410709  3 -  46296322 -----T---------------CA
i Capra_aegagrus.CM003241.1                              I 6 C 0
s Capra_hircus.CM004588.1                                 26592983  3 +  44709034 -----T---------------CA
i Capra_hircus.CM004588.1                                I 6 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    722  1 -      1607 ----------------------A
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271704  5 +    496798 aa---t---------------tg
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1526  3 +      9923 -----t---------------tg
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28886  2 -     39886 ---------------------tg
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80809  3 -    217609 -----T---------------TG
i Catagonus_wagneri.CatWag_scaffold_2839                 I 6 C 0
s Cavia_aperea.AVPZ01000300.1                              4997616  5 +  23392119 aa---a---------------tg
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001058  5 +  23407841 aa---a---------------tg
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64137  5 -     66877 aa---a---------------tg
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6317  5 -     12580 AG---T---------------Tg
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44375  5 +     53515 AG---T---------------Tg
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374143  5 -  26074798 AG---T---------------Tg
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9197  5 -     34880 AG---T---------------Tg
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68293  5 -     89041 AG---T---------------Tg
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3665  5 -      5494 AA---T---------------Tg
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493428  3 -  27778364 -----t---------------tg
i Ceratotherium_simum.JH767749.1                         I 6 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20261  3 +     27315 -----T---------------TG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 6 C 0
s Cercopithecus_ascanius.k141_3120866                        28265  5 -     40656 AC---T---------------TG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8229  5 +     20796 AC---T---------------TG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13344  5 -     17524 AC---T---------------TG
i Cercopithecus_diana.k141_132293                        I 1 C 0
s Cercopithecus_hamlyni.k141_566925                          29070  5 -     34525 AC---T---------------TG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12850  5 -     25376 AC---T---------------TG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365437  5 -  39242232 GC---T---------------TG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271164  5 +  21565898 AC---T---------------TG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33532  5 -     45857 AC---T---------------TG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28433  5 -     32606 AC---T---------------TG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4595  5 +      8499 AC---T---------------TG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26991  5 +     70610 AC---T---------------TG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23952  5 +     36323 AC---T---------------TG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13865  5 -     19938 AG---T---------------TG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31862  5 -     33796 TA---T---------------Tg
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6376  5 -     15404 TA---T---------------TA
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10122  5 -     32913 AG---T---------------Tg
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20535  5 -     40346 AG---T---------------Tg
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20790  5 +    216457 AG---T---------------Tg
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20579  5 +     39636 AG---T---------------Tg
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239950  5 -   2543920 aa---a---------------tg
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            242  5 +      1057 AG---T---------------Tg
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43645  5 -    112038 AG---T---------------Tg
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9196  5 +     34062 AG---T---------------Tg
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344853  5 +  18827391 AC---T---------------TG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11392  5 -     44032 AC---T---------------TG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306178  5 - 135778131 ac---t---------------tg
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  115  5 +     10270 AA---A---------------Tg
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607591  5 -    839153 AA---A---------------Tg
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_4313612                24  5 +       302 aa---t---------------tg
i Chrysochloris_asiatica.ChrAsi_scaffold_4313612         C 0 C 0
s Colobus_angolensis.KN981557.1                             410584  5 -   2368649 ac---t---------------tC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380465  5 - 200372422 AC---T---------------TC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4022  5 -     84244 AC---T---------------TC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3995  3 -      8242 -----C---------------AA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46066  4 -     83289 -A---T---------------Tg
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117760  2 - 224834208 -A---T-----------------
i Cricetulus_griseus.LT883664.1                          C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5582  3 +     87169 -----t---------------ta
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646622  7 -   1526836 AA-TAA---------------TA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19788  5 +     50838 AA---A---------------TA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5527  5 +     36344 aa---a---------------tg
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29311  5 +     75252 ga---a---------------tg
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111221  5 -   2246927 ag---t---------------tg
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293780  5 +  12879189 TA---T---------------Tg
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633147  3 -  35494412 -----T---------------TG
i Delphinapterus_leucas.KZ290073.1                       I 6 C 0
s Desmodus_rotundus.KZ672289.1                            11866515  3 -  20541912 -----T---------------TG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665701  3 -   1390856 -----t---------------tg
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 6 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140500  3 -    198055 -----t---------------tg
i Diceros_bicornis.DicBicMic_scaffold_5955               I 6 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100023  5 -    115145 GA---A---------------TG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951790  5 -  37912305 CA---C---------------TG
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6724  5 -     10735 CA---C---------------TG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856741  5 - 111700974 AA---T---------------TG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7488  3 +     19438 -----t---------------aa
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241337  3 -    607251 -----t---------------ca
i Elaphurus_davidianus.JRFZ01104969.1                    I 6 C 0
s Elephantulus_edwardii.JH947257.1                         1226947  5 +  10337057 aa---t---------------tg
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33614  2 +    110024 -A---T-----------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15617  2 +     18970 -A---T-----------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917331  3 +  41312741 -----a---------------tg
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580105  3 +  14770903 -----t---------------TG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042645  3 -   4378816 -----t---------------ta
i Equus_asinus.JREZ01000139.1                            I 6 C 0
s Equus_caballus.CM000403.2                               21376583  3 +  39960074 -----t---------------ta
i Equus_caballus.CM000403.2                              I 6 C 0
s Equus_przewalskii.KK951119.1                              412565  3 -    498745 -----t---------------ta
i Equus_przewalskii.KK951119.1                           I 6 C 0
s Erythrocebus_patas.Contig38                               264389  5 +  21539334 AC---T---------------TG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72355  3 -    133382 -----t---------------tg
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 6 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114                68  3 +     25849 -----t---------------tg
i Eubalaena_japonica.EubJap_flattened_line_57114         I 6 C 0
s Eulemur_albifrons.k141_51491                               15996  5 -     24895 TA---T---------------Tg
i Eulemur_albifrons.k141_51491                           I 3 C 0
s Eulemur_collaris.k141_601111                               43706  5 -     70999 TA---T---------------Tg
i Eulemur_collaris.k141_601111                           I 3 C 0
s Eulemur_coronatus.k141_384460                              87676  5 +    112731 TA---T---------------Tg
i Eulemur_coronatus.k141_384460                          I 3 C 0
s Eulemur_flavifrons.k141_433119                             44239  5 +     68309 TA---T---------------Tg
i Eulemur_flavifrons.k141_433119                         I 3 C 0
s Eulemur_fulvus.k141_636316                                 54563  5 -     65740 TA---T---------------Tg
i Eulemur_fulvus.k141_636316                             I 3 C 0
s Eulemur_macaco.k141_1562045                                25196  5 -     75513 TA---T---------------Tg
i Eulemur_macaco.k141_1562045                            I 3 C 0
s Eulemur_mongoz.k141_232305                                 49390  5 -     97555 TA---T---------------Tg
i Eulemur_mongoz.k141_232305                             I 3 C 0
s Eulemur_rubriventer.k141_1423786                            6114  5 +     30972 TA---T---------------Tg
i Eulemur_rubriventer.k141_1423786                       I 3 C 0
s Eulemur_rufus.k141_514691                                  43834  5 -     52037 TA---T---------------Tg
i Eulemur_rufus.k141_514691                              I 3 C 0
s Eulemur_sanfordi.k141_1122526                              60237  5 -    111500 TA---T---------------Tg
i Eulemur_sanfordi.k141_1122526                          I 3 C 0
s Felis_catus.CM001381.2                                 186248039  3 - 206538554 -----a---------------ag
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117825  3 - 205367284 -----a---------------aG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28925  3 -     30238 -----A---------------AG
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923168  5 -   3816255 aa---a---------------tg
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126818  5 -    137831 TA---T---------------Tg
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10363  5 +     22493 TA---T---------------Tg
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22446  5 -     32986 ta---t---------------tg
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2383  5 -     28519 GA---T---------------ag
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93054  3 -     95226 -----t---------------ca
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 6 C 0
s Glis_glis.GliGli_scaffold_163929                            2524  5 -      6791 Aa---g---------------tg
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               7015  5 -      8343 ag---t---------------tg
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                256022  5 - 186649187 ag---t---------------tg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3590  5 -     78134 Aa---g---------------tg
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15921  5 -     40692 TA---T---------------Tg
i Hapalemur_alaotrensis.k141_330369                      I 3 C 0
s Hapalemur_gilberti.k141_646465                             37320  5 +     49394 TA---T---------------Tg
i Hapalemur_gilberti.k141_646465                         I 3 C 0
s Hapalemur_griseus.k141_763500                              62191  5 -     66874 TA---T---------------Tg
i Hapalemur_griseus.k141_763500                          I 3 C 0
s Hapalemur_meridionalis.k141_258450                         11062  5 -     42923 TA---T---------------Tg
i Hapalemur_meridionalis.k141_258450                     I 3 C 0
s Hapalemur_occidentalis.k141_578367                         18064  5 -     53142 TA---T---------------Tg
i Hapalemur_occidentalis.k141_578367                     I 3 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32015  3 -    327341 -----a---------------ta
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10720  3 +     48891 -----t---------------ca
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 6 C 0
s Heterocephalus_glaber.JH602082.1                         1933587  5 -  22651954 aa---a---------------tg
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1456  5 +      8654 AC---T---------------Tg
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 2 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8861  3 -     36432 -----T---------------TG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 6 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552838 18 -   1711038 -----ttattatcattgttatta
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_164997               2275 18 -      2730 -----TTATTATCATTATTATGA
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 3
s Hoolock_leuconedys.ctg274                                    144022  5 -    630532 ag---t---------------tg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71390  3 +     83186 -----a---------------ta
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73015  5 +    143317 aa---a---------------tg
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7067  5 +     12352 ag---t---------------tg
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14251  5 +     55766 ag---t---------------tg
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053851  5 + 191637585 ag---t---------------tg
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802729  5 +  11177569 ag---t---------------tg
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8337  8 -    135385 aataca---------------ta
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388062  5 +   7955117 aa---a---------------tg
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11250  3 -     16823 -----t---------------tg
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 6 C 0
s Indri_indri.k141_2415743                                    3629  2 +     11955 TA---------------------
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241248  4 +   9596543 -A---T---------------Tg
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73090  3 -     97402 -----t---------------tg
i Kogia_breviceps.KogBre_flattened_line_3970             I 6 C 0
s Lagothrix_lagothricha.k141_246028                          44471  5 +    110728 AG---T---------------Tg
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64403  3 -     65777 -----T---------------TG
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760718  5 +  30322482 TA---T---------------Tg
i Lemur_catta.scaffold_24                                I 3 C 0
s Leontocebus_fuscicollis.k141_2994775                        5378  5 -     13097 AG---T---------------Tg
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5132  5 +      5940 AG---T---------------Tg
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4955  5 -      5717 AG---C---------------Tg
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11341  5 -     11567 AG---T---------------Tg
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12722  5 -     12945 AG---T---------------Tg
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10234  5 +     29618 TA---T---------------Tg
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10230  5 +     31569 TA---T---------------Tg
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10240  5 +     24756 TA---T---------------Cg
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10240  5 +     16388 TA---T---------------Tg
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814718  3 -   3914936 -----a---------------tg
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342435  3 +    662738 -----t---------------tg
i Lipotes_vexillifer.KE559953.1                          I 6 C 0
s Lepus_americanus.LepAme_scaffold_56121                     19280  2 +     24238 aa---------------------
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 527
s Loris_lydekkerianus.k141_2031736                           12530  5 +     19643 TA---T---------------Tg
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046200  5 -   6120653 TA---T---------------Tg
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086120  5 +  43346337 aa---t---------------tg
i Loxodonta_africana.GL010049.1                          I 2 C 0
s Lycaon_pictus.CM007581.1                                41615756  3 +  59628241 -----a---------------tg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224466  3 -    270270 -----t---------------aa
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Manis_javanica.JSZB01003497.1                             674765  3 -    737560 -----t---------------tg
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222065  3 +    317179 -----t---------------tg
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502276  5 +  40650429 aa---a---------------tg
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151624  3 +    207569 -----T---------------AA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27446  3 -     74585 -----a---------------ta
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52030  4 -    140813 -A---C---------------TG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88719  3 +     93471 -----t---------------tg
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 6 C 0
s Mico_argentatus.k141_582562                                11500  5 +     17804 AG---T---------------Tg
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12000  5 -     12984 AG---T---------------Tg
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20319  5 -     26561 AG---T---------------Tg
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986072  5 +  93316391 ta---t---------------tg
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47914  5 +    145209 AA---T---------------TG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186305  3 +    200668 -----t---------------tg
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 3 C 0
s Microtus_ochrogaster.CM001695.1                         15965063  2 +  27267610 -A---T-----------------
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364459  3 -   8254450 -----t---------------tg
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43372  3 -     48117 -----T---------------TG
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23881  5 -     27822 AC---T---------------TG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9729  3 +     27589 -----A---------------TG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53848  5 -     62432 TA---T---------------TG
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360824  3 +    437263 -----T---------------TG
i Monodon_monoceros.MonMon_M_scaffold_103                I 6 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180546  3 +    366855 -----T---------------TG
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27165  3 -     82753 -----T---------------CA
i Moschus_moschiferus.MosMos_scaffold_13123              I 6 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19749  3 -     63510 -----a---------------ta
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40389  3 +     47283 -----T---------------TG
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596233  4 + 120012414 -A---T---------------TG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689430  4 + 129401213 -A---T---------------TG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217772  4 +  89631738 -A---T---------------Tg
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498715  4 + 130317789 -A---T---------------TG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85428  5 -     86153 Aa---g---------------ag
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356352  3 +  14710649 -----a---------------tg
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64306  5 +     67721 aa---a---------------ta
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794669  3 +  10118263 -----t---------------tG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388846  3 +   6019432 -----t---------------tg
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384872  3 +   4330536 -----t---------------TG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3657  3 +     18357 -----T---------------TG
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121002  5 +    130748 aa---t---------------tg
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947931  4 +   3037898 -A---T---------------TG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30609  5 +     34575 AC---T---------------TG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233490  3 -   7148211 -----t---------------tg
i Neophocaena_asiaeorientalis.KZ687982.1                 I 6 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129153  3 -    149072 -----T---------------TG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54953  5 -    132029 ag---t---------------tg
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11048  5 -     16345 ag---t---------------tg
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16933  5 +     22201 ag---t---------------tg
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415154  5 -  22158432 ag---t---------------tg
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27331  5 -     54323 ag---t---------------tg
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199355  3 +   9404916 -----a---------------tg
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639423  5 + 196305487 TA---T---------------Tg
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             2026  5 -      9413 TA---T---------------Tg
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566806  5 - 199412804 TA---T---------------Tg
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558121  5 -   3988456 AA---C---------------TG
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056396  5 -  11899542 aa---a---------------ca
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453147  3 +   2017862 -----A---------------TG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437945  3 -    630418 -----T---------------CA
i Odocoileus_virginianus.KZ100018.1                      I 6 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16136  3 +    150152 -----t---------------ca
i Okapia_johnstoni.LVCL01S0005463.1                      I 6 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95736  2 -    140218 -A---T-----------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6279  4 -     41509 -A---T---------------TG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103892  3 +  10937097 -----t---------------tg
i Orcinus_orca.KB316932.1                                I 6 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1188  3 +     11607 -----t---------------tg
i Orycteropus_afer.OryAfe_flattened_line_201229          I 2 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40398  3 +    559221 -----a---------------tg
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41980  2 -     51505 ---------------------Tg
i Otolemur_crassicaudatus.k141_649260                    I 2 C 0
s Oryctolagus_cuniculus.CM000791.1                       107105961  2 - 174332312 aa---------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 503
s Otolemur_garnettii.GL873799.1                             354982  5 +   1103335 ta---t---------------ta
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405847  3 -  44047080 -----T---------------CA
i Ovis_aries.CM001607.2                                  I 6 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6366  3 +     17875 -----T---------------CA
i Ovis_canadensis.OviCan_scaffold_67953                  I 6 C 0
s Pan_troglodytes.CM009242.2                               1474050  5 - 189151597 ag---t---------------tg
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25748  3 -    230217 -----a---------------ag
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463074  3 -  18783137 -----a---------------ag
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973733  3 +   8748460 -----a---------------ag
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617372  3 +   2937107 -----T---------------CA
i Pantholops_hodgsonii.KE114653.1                        I 6 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16330  3 +     78924 -----a---------------tt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28309  5 +     31479 TA---T---------------Tg
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20677  5 -     24908 TA---T---------------Tg
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3132  5 +      9367 CA---C---------------TG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249502  4 +  18517816 -A---T---------------TG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33173  5 -     56120 AA---A---------------Tg
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5418  3 -     63832 -----t---------------tg
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 6 C 0
s Piliocolobus_badius.k141_2704958                            3972  5 +     55023 AC---T---------------TC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5240  3 +     22231 -----T---------------TG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66013  5 +    207309 ag---t---------------gg
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7101  5 -     25401 ag---t---------------gg
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32849  5 +     58159 ag---t---------------gg
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33125  5 +     63561 ag---t---------------gg
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32885  5 +     51148 ag---t---------------gg
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557855  5 -   4542175 ag---t---------------gg
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32869  5 +     51125 ag---t---------------gg
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2435  3 +     19503 -----T---------------TG
i Platanista_gangetica.PlaMin_flattened_line_83166       I 6 C 0
s Plecturocebus_bernhardi.k141_2549090                        9287  5 +     39866 AG---T---------------Tg
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4369  5 -      9282 AG---T---------------Tg
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43773  5 -     87950 AG---T---------------Tg
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44167  5 -     88961 AG---T---------------Tg
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8865  5 -     39403 AG---T---------------Tg
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43816  5 +     87928 AG---T---------------Tg
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8864  5 -     60166 AG---T---------------Tg
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15801  5 -     67232 AG---T---------------Tg
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43717  5 -     90634 AG---T---------------Tg
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45184  5 +     89403 AG---T---------------Tg
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179163  5 - 189387572 ag---t---------------tg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193980  5 -   9816681 AG---T---------------Tg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29120  5 +     69807 GC---T---------------TG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46301  5 -     80239 GC---T---------------TG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5447  5 +      7663 AC---T---------------Tg
i Procavia_capensis.ProCapCap_scaffold_165387            I 2 C 0
s Prolemur_simus.MPIZ01000396.1                            1983866  5 +   4620579 ta---t---------------tg
i Prolemur_simus.MPIZ01000396.1                          I 3 C 0
s Psammomys_obesus.NESX01036366.1                            39554  3 +     52041 -----C---------------TG
i Psammomys_obesus.NESX01036366.1                        I 1 C 0
s Pteronotus_parnellii.KE847780.1                            53437  3 -     66298 -----t---------------tg
i Pteronotus_parnellii.KE847780.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5924  3 -     18639 -----A---------------TG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842037  3 -  28871421 -----t---------------aa
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538552  3 -   4952924 -----t---------------aa
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100388  3 +  38429054 -----a---------------ag
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567380  2 -   2598838 TA---------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5018  2 -      7103 TA---------------------
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5615  2 -     11706 TA---------------------
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9352  2 -     30655 TA---------------------
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35666  2 +     46564 TA---------------------
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95945  2 -     98465 TA---------------------
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9584  2 +     35169 TA---------------------
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28555  5 +     91421 AC---T---------------TG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155107  5 -   7812017 AC---T---------------TG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9412  5 +     72585 AC---T---------------TG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54860  3 +     55069 -----T---------------CA
i Rangifer_tarandus.RanTarSib_scaffold_29815             I 6 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916003  3 +   3329780 -----t---------------aa
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 3
s Rhinopithecus_bieti.k119_778604                             3074  5 +      7119 AC---T---------------TG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123689  5 + 195417433 ac---t---------------tG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237916  5 -   7961872 AC---T---------------TG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76537  3 -    116970 -----t---------------aa
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                242  5 -      1130 AG---T---------------Tg
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5144  5 +      6077 AG---T---------------Tg
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5237  5 +      5971 AG---T---------------Tg
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5155  5 +      5932 AG---T---------------Tg
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3500  5 -      4390 AG---T---------------Tg
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393257  5 - 209938924 AG---T---------------Tg
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5103  5 +      5979 AG---T---------------Tg
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1673  5 -     22275 AG---T---------------Tg
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9535  3 +     16473 -----t---------------ca
i Saiga_tatarica.SaiTat_scaffold_39512                   I 6 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110267  4 + 121099817 ag---t---------------t-
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31834  4 -     47369 AG---T---------------T-
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32220  4 -     79414 AG---T---------------T-
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28911  4 -     34454 AG---T---------------T-
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16312  4 -     22428 AG---T---------------T-
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31466  4 -     47109 AG---T---------------T-
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239517  5 +   5703754 AG---T---------------Tg
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9107  5 +     21866 AG---T---------------Tg
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_johnii.k141_843753                           16888  5 -     45317 AC---T---------------TG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24546  5 -     42441 AC---T---------------TG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27224  5 -     29113 AC---T---------------TG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30299  5 -     48123 AC---T---------------TG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51299  4 +     77746 -A---T---------------TG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869640  5 +   3870691 aa---a---------------tg
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8000  2 -     97271 ---------------------tt
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126166  3 +    196729 -----a---------------ta
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645206  3 +  69701581 -----t---------------tt
i Sus_scrofa.CM000828.4                                  I 6 C 0
s Symphalangus_syndactylus.tarseq_199                       392419  5 +   1523678 ag---t---------------tg
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3994  5 +      5583 aa---t---------------tg
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192890  3 +    199430 -----t---------------tg
i Tapirus_indicus.TapInd_scaffold_7432                   I 6 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106858  3 -    539355 -----t---------------tg
i Tapirus_terrestris.TapTer_scaffold_755                 I 6 C 0
s Tarsius_lariang.k141_1733899                                1930  5 +      9917 AA---T---------------Tg
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8728  5 +     20590 AA---T---------------Tg
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25326  5 -     33621 aa---a---------------tg
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20951  5 -     31044 AG---T---------------TG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481435  3 -    610378 -----t---------------tg
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22355  5 +     26378 AC---T---------------TG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35099  5 -     78344 AC---T---------------TG
i Trachypithecus_crepusculus.k141_539312                 I 68 C 0
s Trachypithecus_cristatus.k141_180416                       21680  5 +     25722 AC---T---------------TG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30055  5 -     62838 AC---T---------------TG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30099  5 +     46913 AC---T---------------TG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10838  5 -     28527 AC---T---------------TG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31990  5 -     64340 AC---T---------------TG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30028  5 -     63452 AC---T---------------TG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11475  5 +     22490 AC---T---------------TG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4898  5 -      6147 AC---T---------------TG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11811  5 -     13050 AC---T---------------TG
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256973  5 -   6242583 AC---T---------------TG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3069  5 +     19340 AC---T---------------TG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175146  3 -    200418 -----C---------------Tg
i Tragulus_javanicus.TraJav_scaffold_3462                I 6 C 0
s Trichechus_manatus.JH594705.1                            6482815  5 -  10818551 AA---T---------------Tg
i Trichechus_manatus.JH594705.1                          I 2 C 0
s Tupaia_chinensis.KB320699.1                              1835635  5 -   4065304 GA---G---------------GG
i Tupaia_chinensis.KB320699.1                            C 0 I 723
s Tupaia_tana.TupTan_flattened_line_394                       9656  5 -     70247 GA---G---------------GG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 738
s Tursiops_truncatus.MRVK01000835.1                       17367017  3 -  33153633 -----t---------------tg
i Tursiops_truncatus.MRVK01000835.1                      I 6 C 0
s Ursus_maritimus.KK499267.1                                183367  3 +   5085361 -----a---------------tg
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26519  5 -     30710 TA---T---------------Tg
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25426  5 -    147434 TA---T---------------Tg
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77568  3 +   5488506 -----T---------------TA
i Vicugna_pacos.KN270157.1                               I 6 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106121  3 -    112863 -----A---------------TG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175396  5 -    224448 GA---A---------------TG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30359  3 -     86975 -----A---------------TG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1208  4 -      1899 -A---C---------------TG
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Sorex_araneus.JH798187.1                                 4672515  9 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667373  0 +   7059049 C
e Crocidura_indochinensis.CroInd_scaffold_77846              11014  0 +     12657 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    4816  0 -     21056 C
e Theropithecus_gelada.CM009954.1                           354612 59 - 186847797 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15594  0 +     22964 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1865419  0 -   1910179 C
e Semnopithecus_hypoleucos.k141_1910531                      30309 150 +     58920 I
e Semnopithecus_entellus.k141_158471                         26797 65 +     27374 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955  0 +    313613 C
e Rattus_norvegicus.chr16                                 37024043 457 -  90668790 I
e Piliocolobus_tephrosceles.PDMG02000141.1                  255762 85 +  14605196 I
e Piliocolobus_kirkii.k141_1310104                            4087 85 +     40849 I
e Piliocolobus_gordonorum.k141_381342                         3497 85 -     89929 I
e Papio_ursinus.k141_5784434                                   367 59 -     10386 I
e Papio_papio.k141_3538738                                     407 59 +     10553 I
e Papio_kindae.k141_2214839                                  23736 59 -     27687 I
e Papio_hamadryas.Contig39                                  293831 59 -  20919399 I
e Papio_cynocephalus.k141_1507553                            11088 59 +     21308 I
e Papio_anubis.CM001495.2                                   244803 59 - 183742232 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Mandrillus_sphinx.Contig270                               358625 59 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        323794 59 +  24302211 I
e Macaca_tonkeana.k141_339739                                 4304 59 +     17132 I
e Macaca_thibetana.k99_45532                                  1144 59 -      5049 I
e Macaca_silenus.Contig273                                  272506 59 +    668171 I
e Macaca_siberu.k141_2185972                                 46598 59 +     59329 I
e Macaca_radiata.k141_2139468                                 2657 59 +     14901 I
e Macaca_nigra.k141_2818840                                  50126 59 -     62418 I
e Macaca_nemestrina.KQ007038.1                              400954 59 +  25927173 I
e Macaca_mulatta.NC_041758.1                                416724 59 - 187317192 I
e Macaca_maura.k141_1103459                                  47521 59 +     51645 I
e Macaca_leonina.k141_321385                                 37777 59 -     50087 I
e Macaca_fuscata.k119_546792                                 26601 59 +     30527 I
e Macaca_fascicularis.k141_1617581                            1486 59 -      5035 I
e Macaca_cyclopis.k119_263443                                26648 59 +     30207 I
e Macaca_assamensis.Contig5                                 374380 59 -  60120075 I
e Macaca_arctoides.k141_1757516                              46718 59 -     61512 I
e Lophocebus_aterrimus.ctg367                               335329 59 -   1826925 I
e Condylura_cristata.JH655891.1                           35808250  0 +  53390261 C
e Cercocebus_torquatus.k141_2159127                          46000 59 -    148725 I
e Cercocebus_lunulatus.k141_2500334                           1616 59 -     14410 I
e Cercocebus_chrysogaster.k141_1522556                       46183 59 +     47900 I
e Cercocebus_atys.KQ010504.1                                142444 59 -   4669795 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       6711  5 +     36723 CTAA------------------C
s Acinonyx_jubatus.LLWD01001279.1                           814132  5 +   1699592 atta------------------c
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27392  5 +     63021 TTAA------------------C
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416593  5 +  29979442 cttg------------------t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216931  5 +    347723 ctga------------------c
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19771  5 -     61208 ctaa------------------c
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49356  5 +     53615 CTAA------------------C
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1387  5 +     13857 CTAA------------------C
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         17938  5 -     21945 CTAA------------------T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19623  5 +     32033 CTAA------------------T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73460  5 -     84148 ctaa------------------c
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45699  5 -     78289 ctaa------------------c
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45138  5 +     55831 ctaa------------------c
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43588  5 -     64179 ctaa------------------c
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            695  5 -      3959 ctaa------------------c
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42213  5 +     45454 ctaa------------------c
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47862  5 +     70886 ctaa------------------c
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10035  5 +     30854 ctaa------------------c
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34169  5 +     42133 ctaa------------------c
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586983  5 +   2318259 CTTA------------------T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178401  5 -    412891 ctca------------------t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52060  5 -     68529 CTTA------------------T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2427  5 +     17741 ctaa------------------c
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3052  5 -     15923 ctaa------------------c
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673334  5 +   5030052 cTAA------------------C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3328  5 -     16391 ctaa------------------c
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2887  5 -     17186 ctaa------------------c
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17399  5 -     32367 ctaa------------------c
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21459  5 -     45910 ctga------------------c
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6659  5 -     15198 ctta------------------t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275925  5 +  21539123 ctaa------------------c
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12092  5 +     48076 ctaa------------------c
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7227  5 -     28759 ctaa------------------c
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34782  5 +     44353 ctaa------------------c
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50152  5 -     71267 ctaa------------------c
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24210  5 -     33135 ctaa------------------c
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964744  5 -  23207421 ctta------------------t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1244  5 -     25979 ctta------------------t
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87989  5 +    124022 ctta------------------t
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23524  5 +    288883 ctta------------------t
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357914  5 +  48749331 ctta------------------t
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756478  5 +   1948126 ctta------------------t
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546620  5 -  45695690 ctta------------------t
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531628  5 -   4408762 ctta------------------t
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9019  5 +     28062 ctaa------------------c
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44313  5 -     91139 ctaa------------------c
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21839  5 +     95584 ctaa------------------c
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21752  5 +    119600 ctaa------------------c
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11407  5 +     18648 ctaa------------------c
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10923  5 -     13885 ctaa------------------c
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3009  5 -      8861 ctaa------------------c
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455401  5 + 189096842 CTAA------------------C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2924  5 +      8664 ctaa------------------c
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632237  5 +  17673402 Ctta------------------t
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666524  5 +   7040546 Ctta------------------t
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210182  5 +   1652518 Ctta------------------t
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506490  5 +  60362399 ctta------------------t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10126  5 -     23171 CTTA------------------T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223469  5 +   9314153 ctta------------------t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616604  5 +  59632846 ctta------------------t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108185  5 -  63665305 ctta------------------t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410712  5 -  46296322 CTTA------------------T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592986  5 +  44709034 CTTA------------------T
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    723  5 -      1607 CTAA------------------C
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271709  5 +    496798 ctGC------------------C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1529  5 +      9923 ctta------------------t
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28888  5 -     39886 ctaa------------------c
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80812  5 -    217609 CTTG------------------T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997621  5 +  23392119 ctga------------------c
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001063  5 +  23407841 ctaa------------------c
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64142  5 -     66877 ctaa------------------c
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6322  5 -     12580 ctaa------------------c
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44380  5 +     53515 ctaa------------------c
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374148  5 -  26074798 ctaa------------------c
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9202  5 -     34880 ctaa------------------c
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68298  5 -     89041 ctaa------------------c
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3670  5 -      5494 ctgc------------------c
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493431  5 -  27778364 cttg------------------t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20264  5 +     27315 CTTG------------------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28270  5 -     40656 CTAA------------------C
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8234  5 +     20796 CTAA------------------C
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13349  5 -     17524 CTAA------------------C
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29075  5 -     34525 CTAA------------------C
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12855  5 -     25376 CTAA------------------C
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365442  5 -  39242232 CTAA------------------C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271169  5 +  21565898 CTAA------------------C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33537  5 -     45857 CTAA------------------C
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28438  5 -     32606 CTAA------------------C
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4600  5 +      8499 CTAA------------------C
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           26996  5 +     70610 CTAA------------------C
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         23957  5 +     36323 CTAA------------------C
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13870  5 -     19938 CTAT------------------c
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31867  5 -     33796 ctaa------------------c
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6381  5 -     15404 ctaa------------------c
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10127  5 -     32913 ctaa------------------c
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20540  5 -     40346 ctaa------------------c
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20795  5 +    216457 ctaa------------------c
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20584  5 +     39636 ctaa------------------c
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239955  5 -   2543920 ctaa------------------t
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            247  5 +      1057 ctaa------------------c
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43650  5 -    112038 ctaa------------------c
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9201  5 +     34062 ctaa------------------c
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344858  5 +  18827391 CTAA------------------C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11397  5 -     44032 CTAA------------------C
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306183  5 - 135778131 ctaa------------------c
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 66
s Choloepus_didactylus.ChoDid_scaffold_147047                  120  5 +     10270 ctaa------------------c
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607596  5 -    839153 ctaa------------------c
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_4313612                29  5 +       302 tcaa------------------c
i Chrysochloris_asiatica.ChrAsi_scaffold_4313612         C 0 C 0
s Colobus_angolensis.KN981557.1                             410589  5 -   2368649 CTAa------------------c
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380470  5 - 200372422 CTAA------------------C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4027  5 -     84244 CTAA------------------C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          3998 23 -      8242 CAAATATTATTATGATTGCTGAT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46070  5 -     83289 ttaa------------------c
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117765  4 - 224834208 -TAA------------------C
i Cricetulus_griseus.LT883664.1                          I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5585  5 +     87169 caca------------------a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646629  5 -   1526836 ATaa------------------t
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19793  5 +     50838 CTAA------------------C
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5532  5 +     36344 ttaa------------------c
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29316  5 +     75252 ctaa------------------c
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111226  5 -   2246927 cgaa------------------c
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293785  5 +  12879189 ctaa------------------c
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633150  5 -  35494412 CTTA------------------T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866518  5 -  20541912 CTTA------------------T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665704  4 -   1390856 c-tG------------------T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140503  5 -    198055 cttg------------------t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100028  5 -    115145 CTCA------------------T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951795  5 -  37912305 ctaa------------------t
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6729  5 -     10735 CTAA------------------T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856746  5 - 111700974 Ttac------------------c
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7491  5 +     19438 ctta------------------t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241340  5 -    607251 ctta------------------t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226952  5 +  10337057 caag------------------c
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33616  4 +    110024 -TAA------------------C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15619  4 +     18970 -TAA------------------C
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917334  5 +  41312741 ctta------------------t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580108  5 +  14770903 CTTA------------------T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042648  5 -   4378816 cttg------------------t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376586  5 +  39960074 cttg------------------t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412568  5 -    498745 cttg------------------t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               264394  5 +  21539334 CTAA------------------C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72358  5 -    133382 ctta------------------t
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114                71  5 +     25849 ctta------------------t
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16001  5 -     24895 ctaa------------------c
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43711  5 -     70999 ctaa------------------c
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87681  5 +    112731 ctaa------------------c
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44244  5 +     68309 ctaa------------------c
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54568  5 -     65740 ctaa------------------c
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25201  5 -     75513 ctaa------------------c
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49395  5 -     97555 ctaa------------------c
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6119  5 +     30972 ctaa------------------c
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43839  5 -     52037 ctaa------------------c
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60242  5 -    111500 ctaa------------------c
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248042  5 - 206538554 atta------------------c
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117828  5 - 205367284 ATTA------------------C
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28928  5 -     30238 ATTA------------------C
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923173  5 -   3816255 ctaa------------------t
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126823  5 -    137831 ctaa------------------c
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10368  5 +     22493 ctaa------------------c
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22451  5 -     32986 ttaa------------------c
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2388  5 -     28519 ctaa------------------c
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93057  5 -     95226 ctta------------------t
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2529  5 -      6791 ctaa------------------c
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               7020  5 -      8343 ctaa------------------c
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                256027  5 - 186649187 ctaa------------------c
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3595  5 -     78134 ccaa------------------a
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15926  5 -     40692 ctaa------------------c
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37325  5 +     49394 ctaa------------------c
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62196  5 -     66874 ctaa------------------c
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11067  5 -     42923 ctaa------------------c
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18069  5 -     53142 ctaa------------------c
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32018  5 -    327341 ctca------------------a
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10723  5 +     48891 ctta------------------t
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933592  5 -  22651954 ctaa------------------t
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1461  5 +      8654 ctaa------------------c
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8864  5 -     36432 TTTA------------------T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552859  5 -   1711038 ctta------------------t
i Hipposideros_armiger.JXIK01000431.1                    I 3 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2296  5 -      2730 CTTA------------------T
i Hipposideros_galeritus.HipGal_scaffold_164997          I 3 C 0
s Hoolock_leuconedys.ctg274                                    144027  5 -    630532 ctaa------------------c
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71393  3 +     83186 --ca------------------t
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73020  5 +    143317 ctaa------------------c
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7072  5 +     12352 ctaa------------------c
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14256  5 +     55766 ctaa------------------c
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053856  5 + 191637585 ctaa------------------c
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802734  5 +  11177569 ctaa------------------c
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8345  5 -    135385 ttaa------------------c
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388067  5 +   7955117 ctaa------------------c
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11253  5 -     16823 ctta------------------t
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241252  5 +   9596543 ctaa------------------c
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73093  5 -     97402 ctta------------------t
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44476  5 +    110728 ctaa------------------c
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64406  5 -     65777 CGTA------------------G
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760723  5 +  30322482 ctaa------------------c
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5383  5 -     13097 ctaa------------------c
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5137  5 +      5940 ctaa------------------c
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4960  5 -      5717 ctaa------------------c
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11346  5 -     11567 ctaa------------------c
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12727  5 -     12945 ccaa------------------c
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10239  5 +     29618 ctaa------------------t
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10235  5 +     31569 ctaa------------------t
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10245  5 +     24756 ctaa------------------t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10245  5 +     16388 ctaa------------------t
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814721  5 -   3914936 cttg------------------t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342438  5 +    662738 ctta------------------t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12535  5 +     19643 ctaa------------------c
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046205  5 -   6120653 ctaa------------------c
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086125  5 +  43346337 ctaa------------------c
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615759  5 +  59628241 ctta------------------t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224469  5 -    270270 ctta------------------t
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Manis_javanica.JSZB01003497.1                             674768  5 -    737560 ctta------------------t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222068  5 +    317179 cttt------------------t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502281  5 +  40650429 ctaa------------------c
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151627  4 +    207569 TTGC-------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 15
s Mellivora_capensis.MelCap_flattened_line_19308             27449  5 -     74585 ctta------------------t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52034  5 -    140813 Gtac------------------c
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88722  5 +     93471 ctta------------------t
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11505  5 +     17804 ctaa------------------c
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12005  5 -     12984 ctaa------------------c
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20324  5 -     26561 ctaa------------------c
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986077  5 +  93316391 ataa------------------c
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47919  5 +    145209 Gtaa------------------c
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186308  5 +    200668 ctta------------------t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965065  4 +  27267610 -TAA------------------C
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364462  5 -   8254450 ctTA------------------T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43375  5 -     48117 CTTA------------------T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23886  5 -     27822 CTAA------------------C
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9732  5 +     27589 CTTG------------------T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53853  5 -     62432 Ataa------------------c
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360827  5 +    437263 CTTA------------------T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180549  5 +    366855 CTTG------------------T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27168  5 -     82753 CTTA------------------T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19752  5 -     63510 ctca------------------a
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40392  5 +     47283 CTTA------------------T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596237  5 + 120012414 TTAA------------------T
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689434  5 + 129401213 TTaa------------------t
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217776  5 +  89631738 ttaa------------------t
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498719  5 + 130317789 TTaa------------------t
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85433  5 -     86153 ttaa------------------c
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356355  5 +  14710649 ctTA------------------T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64311  5 +     67721 ctaa------------------c
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794672  5 +  10118263 CTTA------------------T
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388849  5 +   6019432 ctta------------------t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384875  5 +   4330536 CTTA------------------T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3660  5 +     18357 CTTA------------------T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121007  5 +    130748 ataa------------------c
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947935  5 +   3037898 CTTA------------------C
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30614  5 +     34575 CTAA------------------C
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233493  5 -   7148211 ctta------------------t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129156  5 -    149072 CTTA------------------T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54958  5 -    132029 ctaa------------------c
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11053  5 -     16345 ctaa------------------c
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16938  5 +     22201 ctaa------------------c
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415159  5 -  22158432 ctaa------------------c
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27336  5 -     54323 ctaa------------------c
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199358  5 +   9404916 ttta------------------t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639428  5 + 196305487 ctaa------------------c
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             2031  5 -      9413 ctaa------------------c
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566811  5 - 199412804 ctaa------------------c
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558126  5 -   3988456 GTAA------------------C
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056401  5 -  11899542 ctac------------------c
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453150  5 +   2017862 CTTG------------------T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437948  5 -    630418 CTTA------------------T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16139  5 +    150152 ctta------------------t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95738  4 -    140218 -TAA------------------C
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6283  5 -     41509 TTAA------------------C
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103895  5 +  10937097 ctta------------------t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1191  5 +     11607 ccaa------------------c
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40401  5 +    559221 ctta------------------t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        41982  5 -     51505 ctaa------------------c
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354987  5 +   1103335 ctaa------------------c
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405850  5 -  44047080 CTTA------------------T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6369  5 +     17875 CTTA------------------T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1474055  5 - 189151597 CTAA------------------C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25751  5 -    230217 atta------------------c
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463077  5 -  18783137 atta------------------c
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973736  5 +   8748460 atta------------------c
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617375  5 +   2937107 CTTA------------------T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16333  5 +     78924 ctta------------------t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28314  5 +     31479 ctga------------------c
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20682  5 -     24908 ctga------------------c
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3137  5 +      9367 CTAA------------------C
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249506  5 +  18517816 TTAA------------------C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33178  5 -     56120 ctaa------------------t
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5421  5 -     63832 ctta------------------t
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            3977  5 +     55023 CTAA------------------C
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5243  5 +     22231 CTTA------------------T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66018  5 +    207309 ctaa------------------c
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7106  5 -     25401 ctaa------------------t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32854  5 +     58159 ctaa------------------c
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33130  5 +     63561 ctaa------------------c
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32890  5 +     51148 ctaa------------------c
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557860  5 -   4542175 ctaa------------------c
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32874  5 +     51125 ctaa------------------c
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2438  5 +     19503 CTTA------------------T
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9292  5 +     39866 ctaa------------------c
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4374  5 -      9282 ctaa------------------c
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43778  5 -     87950 ctaa------------------c
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44172  5 -     88961 ctaa------------------c
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8870  5 -     39403 ctaa------------------c
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43821  5 +     87928 ctaa------------------c
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8869  5 -     60166 ctaa------------------c
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15806  5 -     67232 ctaa------------------c
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43722  5 -     90634 ctaa------------------c
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45189  5 +     89403 ctaa------------------c
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179168  5 - 189387572 CTAA------------------C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193985  5 -   9816681 ctaa------------------c
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29125  5 +     69807 CTAA------------------C
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46306  5 -     80239 CTAA------------------C
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5452  5 +      7663 ctaa------------------c
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983871  5 +   4620579 ctaa------------------c
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39557  5 +     52041 Gtaa------------------c
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53440  5 -     66298 ctTA------------------T
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5927  5 -     18639 CTTA------------------T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842040  5 -  28871421 ctta------------------t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538555  5 -   4952924 ctta------------------t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100391  5 +  38429054 atta------------------c
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28560  5 +     91421 CTAA------------------C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155112  5 -   7812017 CTAA------------------C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9417  5 +     72585 CTAA------------------C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54863  5 +     55069 CTTA------------------C
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916009  5 +   3329780 ctta------------------t
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 C 0
s Rhinopithecus_bieti.k119_778604                             3079  5 +      7119 CTAA------------------C
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123694  5 + 195417433 CTAa------------------c
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             237921  5 -   7961872 CTAA------------------C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76540  5 -    116970 ctta------------------t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                247  5 -      1130 ctaa------------------c
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5149  5 +      6077 ctaa------------------c
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5242  5 +      5971 ctaa------------------c
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5160  5 +      5932 ctaa------------------c
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3505  5 -      4390 ctaa------------------c
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393262  5 - 209938924 ctaa------------------c
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5108  5 +      5979 ctaa------------------c
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1678  5 -     22275 ctaa------------------c
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9538  5 +     16473 ctta------------------t
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110271  5 + 121099817 cTAA------------------C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31838  5 -     47369 ctaa------------------c
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32224  5 -     79414 ctaa------------------c
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28915  5 -     34454 ctaa------------------c
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16316  5 -     22428 ctaa------------------c
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31470  5 -     47109 ctaa------------------c
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239522  5 +   5703754 ctaa------------------c
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9112  5 +     21866 ctaa------------------c
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_johnii.k141_843753                           16893  5 -     45317 CTAA------------------C
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24551  5 -     42441 CTAA------------------C
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27229  5 -     29113 CTAA------------------C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30304  5 -     48123 CTAA------------------C
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51303  5 +     77746 TTAA------------------C
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869645  5 +   3870691 ctaa------------------c
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8002  5 -     97271 ctta------------------t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126169  5 +    196729 ctca------------------a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645209  5 +  69701581 ctta------------------t
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392424  5 +   1523678 ctaa------------------c
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                3999  5 +      5583 ataa------------------c
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192893  5 +    199430 cttg------------------t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106861  5 -    539355 cttg------------------t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1935  5 +      9917 ctga------------------c
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8733  5 +     20590 ctga------------------c
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25331  5 -     33621 ctag------------------t
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20956  5 -     31044 Ataa------------------c
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481438  5 -    610378 ctta------------------t
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22360  5 +     26378 CTAA------------------C
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35104  5 -     78344 CTAA------------------C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21685  5 +     25722 CTAA------------------C
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30060  5 -     62838 CTAA------------------C
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30104  5 +     46913 CTAA------------------C
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10843  5 -     28527 CTAA------------------C
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      31995  5 -     64340 CTAA------------------C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30033  5 -     63452 CTAA------------------C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11480  5 +     22490 CTAA------------------C
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4903  5 -      6147 CTAA------------------C
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11816  5 -     13050 CTAA------------------C
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             256978  5 -   6242583 CTAA------------------C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3074  5 +     19340 CTAA------------------C
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175149  5 -    200418 cttc------------------t
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482820  5 -  10818551 ctaa------------------c
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836363  5 -   4065304 ATGa------------------c
i Tupaia_chinensis.KB320699.1                            I 723 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10399  5 -     70247 ATGA------------------c
i Tupaia_tana.TupTan_flattened_line_394                  I 738 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367020  5 -  33153633 ctta------------------t
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Ursus_maritimus.KK499267.1                                183370  5 +   5085361 cttg------------------c
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26524  5 -     30710 ctaa------------------c
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25431  5 -    147434 ctaa------------------c
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77571  5 +   5488506 CTTA------------------T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106124  5 -    112863 CTTA------------------T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175401  5 -    224448 ctaa------------------c
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30362  5 -     86975 CTTG------------------T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1212  5 -      1899 CTAA------------------C
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Sorex_araneus.JH798187.1                                 4672515  9 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667373  0 +   7059049 C
e Crocidura_indochinensis.CroInd_scaffold_77846              11014  0 +     12657 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    4816  0 -     21056 C
e Theropithecus_gelada.CM009954.1                           354612 59 - 186847797 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15594  0 +     22964 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1865419  0 -   1910179 C
e Semnopithecus_hypoleucos.k141_1910531                      30309 150 +     58920 I
e Semnopithecus_entellus.k141_158471                         26797 65 +     27374 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955  0 +    313613 C
e Rattus_norvegicus.chr16                                 37024043 457 -  90668790 I
e Propithecus_verreauxi.k141_1047036                          9586  0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       95947  0 -     98465 C
e Propithecus_perrieri.k141_1496898                          35668  0 +     46564 C
e Propithecus_edwardsi.k141_635656                            9354  0 -     30655 C
e Propithecus_diadema.k141_153680                             5617  0 -     11706 C
e Propithecus_coronatus.k141_209299                           5020  0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1567382  0 -   2598838 C
e Piliocolobus_tephrosceles.PDMG02000141.1                  255762 85 +  14605196 I
e Piliocolobus_kirkii.k141_1310104                            4087 85 +     40849 I
e Piliocolobus_gordonorum.k141_381342                         3497 85 -     89929 I
e Papio_ursinus.k141_5784434                                   367 59 -     10386 I
e Papio_papio.k141_3538738                                     407 59 +     10553 I
e Papio_kindae.k141_2214839                                  23736 59 -     27687 I
e Papio_hamadryas.Contig39                                  293831 59 -  20919399 I
e Papio_cynocephalus.k141_1507553                            11088 59 +     21308 I
e Papio_anubis.CM001495.2                                   244803 59 - 183742232 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Mandrillus_sphinx.Contig270                               358625 59 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        323794 59 +  24302211 I
e Macaca_tonkeana.k141_339739                                 4304 59 +     17132 I
e Macaca_thibetana.k99_45532                                  1144 59 -      5049 I
e Macaca_silenus.Contig273                                  272506 59 +    668171 I
e Macaca_siberu.k141_2185972                                 46598 59 +     59329 I
e Macaca_radiata.k141_2139468                                 2657 59 +     14901 I
e Macaca_nigra.k141_2818840                                  50126 59 -     62418 I
e Macaca_nemestrina.KQ007038.1                              400954 59 +  25927173 I
e Macaca_mulatta.NC_041758.1                                416724 59 - 187317192 I
e Macaca_maura.k141_1103459                                  47521 59 +     51645 I
e Macaca_leonina.k141_321385                                 37777 59 -     50087 I
e Macaca_fuscata.k119_546792                                 26601 59 +     30527 I
e Macaca_fascicularis.k141_1617581                            1486 59 -      5035 I
e Macaca_cyclopis.k119_263443                                26648 59 +     30207 I
e Macaca_assamensis.Contig5                                 374380 59 -  60120075 I
e Macaca_arctoides.k141_1757516                              46718 59 -     61512 I
e Lophocebus_aterrimus.ctg367                               335329 59 -   1826925 I
e Indri_indri.k141_2415743                                    3631  0 +     11955 C
e Condylura_cristata.JH655891.1                           35808250  0 +  53390261 C
e Cercocebus_torquatus.k141_2159127                          46000 59 -    148725 I
e Cercocebus_lunulatus.k141_2500334                           1616 59 -     14410 I
e Cercocebus_chrysogaster.k141_1522556                       46183 59 +     47900 I
e Cercocebus_atys.KQ010504.1                                142444 59 -   4669795 I
e Avahi_peyrierasi.k141_1823318                               7496  0 -     19611 C
e Avahi_laniger.k141_2756659                                  7488  0 +     11645 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6716 3 +     36723 A-TT
s Acinonyx_jubatus.LLWD01001279.1                           814137 3 +   1699592 a-tt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27397 3 +     63021 A-TG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416598 3 +  29979442 g-tt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216936 3 +    347723 a-tt
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19776 3 -     61208 a-tt
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49361 3 +     53615 A-TT
i Allenopithecus_nigroviridis.k141_3755588               C 0 I 59
s Allochrocebus_lhoesti.k141_3412094                          1392 3 +     13857 A-TT
i Allochrocebus_lhoesti.k141_3412094                     C 0 I 59
s Allochrocebus_preussi.k141_1993939                         17943 3 -     21945 A-TT
i Allochrocebus_preussi.k141_1993939                     C 0 I 59
s Allochrocebus_solatus.k141_3554717                         19628 3 +     32033 A-TT
i Allochrocebus_solatus.k141_3554717                     C 0 I 59
s Alouatta_belzebul.k141_1011583                             73465 3 -     84148 a-tt
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45704 3 -     78289 a-tt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45143 3 +     55831 a-tt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43593 3 -     64179 a-tt
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            700 3 -      3959 a-tt
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42218 3 +     45454 a-tt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47867 3 +     70886 a-tt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10040 3 +     30854 a-tt
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34174 3 +     42133 a-tt
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586988 3 +   2318259 a-tt
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178406 3 -    412891 a-tt
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52065 3 -     68529 a-tt
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2432 3 +     17741 a-tt
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3057 3 -     15923 a-tt
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673339 3 +   5030052 A-TT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3333 3 -     16391 a-tt
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2892 3 -     17186 a-tt
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17404 3 -     32367 a-tt
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21464 3 -     45910 a-tt
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6664 3 -     15198 a-tt
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275930 3 +  21539123 a-tt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12097 3 +     48076 a-tt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7232 3 -     28759 a-tt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34787 3 +     44353 a-tt
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50157 3 -     71267 a-tt
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24215 3 -     33135 a-tt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964749 3 -  23207421 g-tt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 10
s Balaenoptera_bonaerensis.DF411050.1                         1249 3 -     25979 g-tt
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 10
s Beatragus_hunteri.BeaHun_scaffold_7278                     87994 3 +    124022 a-tt
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23529 2 +    288883 a-t-
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357919 2 +  48749331 a-t-
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756483 2 +   1948126 a-t-
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546625 2 -  45695690 a-t-
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531633 2 -   4408762 a-t-
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9024 3 +     28062 a-tt
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44318 3 -     91139 a-tt
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21844 3 +     95584 a-tt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21757 3 +    119600 a-tt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11412 3 +     18648 a-tt
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10928 3 -     13885 a-tt
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3014 3 -      8861 a-tt
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455406 3 + 189096842 A-TT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2929 3 +      8664 a-tt
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632242 3 +  17673402 a-tt
i Camelus_bactrianus.KN276810.1                          C 0 I 2
s Camelus_dromedarius.KN272107.1                           4666529 3 +   7040546 a-tt
i Camelus_dromedarius.KN272107.1                         C 0 I 2
s Camelus_ferus.KB017975.1                                 1210187 3 +   1652518 a-tt
i Camelus_ferus.KB017975.1                               C 0 I 2
s CanFam4.chr16                                           42506495 3 +  60362399 a-tt
i CanFam4.chr16                                          C 0 I 10
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10131 3 -     23171 A-TT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 10
s Canis_lupus_dingo.QKWQ01000480.1                          223474 3 +   9314153 a-tt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 10
s Canis_lupus_familiaris.chr16                            41616609 3 +  59632846 a-tt
i Canis_lupus_familiaris.chr16                           C 0 I 10
s Canis_lupus_orion.HG994398.1                            45108190 3 -  63665305 a-tt
i Canis_lupus_orion.HG994398.1                           C 0 I 10
s Capra_aegagrus.CM003241.1                               27410717 3 -  46296322 a-tt
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592991 3 +  44709034 a-tt
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    728 3 -      1607 A-TT
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271714 3 +    496798 A-TT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1534 3 +      9923 a-tt
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28893 3 -     39886 a-tt
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80817 3 -    217609 A-TT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997626 3 +  23392119 c-tt
i Cavia_aperea.AVPZ01000300.1                            C 0 I 12
s Cavia_porcellus.DS562891.1                               5001068 3 +  23407841 c-tt
i Cavia_porcellus.DS562891.1                             C 0 I 12
s Cavia_tschudii.CavTsc_scaffold_23560                       64147 3 -     66877 c-tt
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 12
s Cebuella_niveiventris.k141_592277                           6327 3 -     12580 a-tt
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44385 3 +     53515 a-tt
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374153 3 -  26074798 a-tt
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9207 3 -     34880 a-tt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68303 3 -     89041 a-tt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3675 3 -      5494 a-tt
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493436 3 -  27778364 a-tt
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20269 3 +     27315 A-TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28275 3 -     40656 A-TT
i Cercopithecus_ascanius.k141_3120866                    C 0 I 59
s Cercopithecus_cephus.k141_4183004                           8239 3 +     20796 A-TT
i Cercopithecus_cephus.k141_4183004                      C 0 I 59
s Cercopithecus_diana.k141_132293                            13354 3 -     17524 A-TT
i Cercopithecus_diana.k141_132293                        C 0 I 53
s Cercopithecus_hamlyni.k141_566925                          29080 3 -     34525 A-TT
i Cercopithecus_hamlyni.k141_566925                      C 0 I 59
s Cercopithecus_lowei.k141_2101310                           12860 3 -     25376 A-TT
i Cercopithecus_lowei.k141_2101310                       C 0 I 59
s Cercopithecus_albogularis.ctg5                                  365447 3 -  39242232 A-TT
i Cercopithecus_albogularis.ctg5                               C 0 I 59
s Cercopithecus_mona.ctg39                                  271174 3 +  21565898 A-TT
i Cercopithecus_mona.ctg39                               C 0 I 59
s Cercopithecus_neglectus.k141_858615                        33542 3 -     45857 A-TT
i Cercopithecus_neglectus.k141_858615                    C 0 I 56
s Cercopithecus_nictitans.k141_2995370                       28443 3 -     32606 A-TT
i Cercopithecus_nictitans.k141_2995370                   C 0 I 59
s Cercopithecus_petaurista.k141_42573                         4605 3 +      8499 A-TT
i Cercopithecus_petaurista.k141_42573                    C 0 I 59
s Cercopithecus_pogonias.k141_6079                           27001 3 +     70610 A-TT
i Cercopithecus_pogonias.k141_6079                       C 0 I 59
s Cercopithecus_roloway.k141_3012935                         23962 3 +     36323 A-TT
i Cercopithecus_roloway.k141_3012935                     C 0 I 59
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13875 3 -     19938 a-tt
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 3
s Cheirogaleus_major.k141_666340                             31872 3 -     33796 a-tt
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6386 3 -     15404 a-tt
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10132 3 -     32913 a-tt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20545 3 -     40346 a-tt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20800 3 +    216457 a-tt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20589 3 +     39636 a-tt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239960 3 -   2543920 a-tt
i Chinchilla_lanigera.JH722012.1                         C 0 I 12
s Chiropotes_albinasus.k141_2628359                            252 3 +      1057 g-tt
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43655 3 -    112038 a-tt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9206 3 +     34062 a-tt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344863 3 +  18827391 A-TT
i Chlorocebus_aethiops.ctg25                             C 0 I 59
s Chlorocebus_pygerythrus.k141_3063162                       11402 3 -     44032 A-TT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 I 59
s Chlorocebus_sabaeus.CM001947.1                            306254 3 - 135778131 c-tt
i Chlorocebus_sabaeus.CM001947.1                         I 66 I 59
s Choloepus_didactylus.ChoDid_scaffold_147047                  125 3 +     10270 a-tc
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 I 14
s Choloepus_hoffmanni.KN194906.1                            607601 3 -    839153 a-tc
i Choloepus_hoffmanni.KN194906.1                         C 0 I 14
s Chrysochloris_asiatica.ChrAsi_scaffold_4313612                34 3 +       302 a-tt
i Chrysochloris_asiatica.ChrAsi_scaffold_4313612         C 0 I 11
s Colobus_angolensis.KN981557.1                             410594 3 -   2368649 a-tt
i Colobus_angolensis.KN981557.1                          C 0 I 127
s Colobus_guereza.LG01                                      380475 3 - 200372422 A-TT
i Colobus_guereza.LG01                                   C 0 I 127
s Colobus_polykomos.k141_906115                               4032 3 -     84244 A-TT
i Colobus_polykomos.k141_906115                          C 0 I 127
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4021 3 -      8242 A-TG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46075 3 -     83289 a-tg
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117769 3 - 224834208 A-AG
i Cricetulus_griseus.LT883664.1                          C 0 I 11
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5590 3 +     87169 a-gt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646634 3 -   1526836 a-at
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19798 3 +     50838 A-TT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5537 3 +     36344 a-tt
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 12
s Dasyprocta_punctata.DasPun_flattened_line_15900            29321 3 +     75252 a-tt
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 12
s Dasypus_novemcinctus.JH564415.1                          2111231 3 -   2246927 a-tt
i Dasypus_novemcinctus.JH564415.1                        C 0 I 14
s Daubentonia_madagascariensis.ctg71                        293790 3 +  12879189 a-tt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633155 3 -  35494412 G-CT
i Delphinapterus_leucas.KZ290073.1                       C 0 I 10
s Desmodus_rotundus.KZ672289.1                            11866523 3 -  20541912 A-TT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665708 3 -   1390856 A-TT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140508 3 -    198055 a-tt
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100033 3 -    115145 C-TT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951800 3 -  37912305 a-tt
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6734 3 -     10735 A-TT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856751 3 - 111700974 a-tt
i Echinops_telfairi.JH980293.1                           C 0 I 11
s Eidolon_helvum.AWHC01266696.1                               7496 3 +     19438 a-tt
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241345 3 -    607251 a-tt
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226957 3 +  10337057 a-tt
i Elephantulus_edwardii.JH947257.1                       C 0 I 11
s Ellobius_lutescens.LOEQ01008920.1                          33620 3 +    110024 A-TG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 11
s Ellobius_talpinus.LOJH01026522.1                           15623 3 +     18970 A-TG
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 11
s Enhydra_lutris.KZ291758.1                               24917339 3 +  41312741 a-tt
i Enhydra_lutris.KZ291758.1                              C 0 I 8
s Eptesicus_fuscus.JH977646.1                             12580113 3 +  14770903 a-tt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042653 3 -   4378816 g-tt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376591 3 +  39960074 g-tt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412573 3 -    498745 g-tt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                               264399 3 +  21539334 A-TT
i Erythrocebus_patas.Contig38                            C 0 I 59
s Eschrichtius_robustus.EscRob_flattened_line_8968           72363 3 -    133382 g-tt
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 10
s Eubalaena_japonica.EubJap_flattened_line_57114                76 3 +     25849 g-tt
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 I 10
s Eulemur_albifrons.k141_51491                               16006 3 -     24895 a-tt
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43716 3 -     70999 a-tt
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87686 3 +    112731 a-tt
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44249 3 +     68309 a-tt
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54573 3 -     65740 a-tt
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25206 3 -     75513 a-tt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49400 3 -     97555 a-tt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6124 3 +     30972 a-tt
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43844 3 -     52037 a-tt
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60247 3 -    111500 a-tt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248047 3 - 206538554 a-tt
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117833 3 - 205367284 A-TT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28933 3 -     30238 A-TT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923178 3 -   3816255 a-tt
i Fukomys_damarensis.KN121974.1                          C 0 I 13
s Galago_moholi.ctg3793                                     126828 3 -    137831 a-tg
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10373 3 +     22493 a-tg
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22456 3 -     32986 a-tg
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2393 3 -     28519 a-tt
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93062 3 -     95226 a-tt
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2534 3 -      6791 a-tt
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               7025 3 -      8343 a-tt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                256032 3 - 186649187 a-tt
i Gorilla_gorilla.LT578341.1                             C 0 I 29
s Graphiurus_murinus.GraMur_scaffold_10447                    3600 3 -     78134 a-tt
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15931 3 -     40692 a-tt
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37330 3 +     49394 a-tt
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62201 3 -     66874 a-tt
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11072 3 -     42923 a-tt
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18074 3 -     53142 a-tt
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32023 3 -    327341 a-gt
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10728 3 +     48891 a-tt
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933597 3 -  22651954 a-tt
i Heterocephalus_glaber.JH602082.1                       C 0 I 13
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1466 3 +      8654 a-tt
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 I 11
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8869 3 -     36432 a-tt
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552864 3 -   1711038 a-tt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2301 3 -      2730 A-TT
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144032 3 -    630532 a-tt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71396 3 +     83186 a-tt
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73025 3 +    143317 c-tt
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 11
s Hylobates_agilis.k141_1155965                               7077 3 +     12352 a-tt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14261 3 +     55766 a-tt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053861 3 + 191637585 a-tt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802739 3 +  11177569 a-tt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8350 3 -    135385 a-tt
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388072 3 +   7955117 a-tt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11258 3 -     16823 g-tt
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 10
s Jaculus_jaculus.JH725527.1                               1241257 3 +   9596543 a-tt
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73098 3 -     97402 g-tt
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 10
s Lagothrix_lagothricha.k141_246028                          44481 3 +    110728 a-tt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64411 3 -     65777 a-tt
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760728 3 +  30322482 a-tt
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5388 3 -     13097 a-tt
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5142 3 +      5940 a-tt
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4965 3 -      5717 a-tt
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11351 3 -     11567 a-tt
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12732 3 -     12945 a-tt
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10244 3 +     29618 a-tt
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10240 3 +     31569 a-tt
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10250 3 +     24756 a-tt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10250 3 +     16388 a-tt
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814726 3 -   3914936 a-tt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342443 3 +    662738 g-tt
i Lipotes_vexillifer.KE559953.1                          C 0 I 10
s Loris_lydekkerianus.k141_2031736                           12540 3 +     19643 a-tt
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046210 3 -   6120653 a-tt
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086130 3 +  43346337 a-tt
i Loxodonta_africana.GL010049.1                          C 0 I 11
s Lycaon_pictus.CM007581.1                                41615764 3 +  59628241 a-tt
i Lycaon_pictus.CM007581.1                               C 0 I 10
s Macroglossus_sobrinus.MacSob_scaffold_4024                224474 3 -    270270 a-tt
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Manis_javanica.JSZB01003497.1                             674773 3 -    737560 a-tt
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222073 3 +    317179 a-tt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502286 3 +  40650429 a-tt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151646 2 +    207569 --TT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 15 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27454 3 -     74585 a-tt
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52039 3 -    140813 a-tg
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88727 3 +     93471 g-tt
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 10
s Mico_argentatus.k141_582562                                11510 3 +     17804 a-tt
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12010 3 -     12984 a-tt
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20329 3 -     26561 a-tt
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986082 3 +  93316391 a-tT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47924 3 +    145209 a-tt
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 11
s Micronycteris_hirsuta.MicHir_scaffold_2233                186313 3 +    200668 a-tt
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965069 3 +  27267610 A-TG
i Microtus_ochrogaster.CM001695.1                        C 0 I 11
s Miniopterus_natalensis.LDJU01000034.1                    6364467 3 -   8254450 A-TT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43380 3 -     48117 a-tt
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23891 3 -     27822 A-TT
i Miopithecus_ogouensis.k141_1534655                     C 0 I 59
s Mirounga_angustirostris.MirAng_flattened_line_54046         9737 3 +     27589 A-TT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53858 3 -     62432 a-tc
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360832 3 +    437263 G-TT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 10
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180554 3 +    366855 A-TT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27173 3 -     82753 a-tt
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19757 3 -     63510 a-gt
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40397 3 +     47283 A-TT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596242 3 + 120012414 A-CA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689439 3 + 129401213 a-ta
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217781 3 +  89631738 a-ta
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498724 3 + 130317789 a-ta
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85438 3 -     86153 a-tc
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356360 3 +  14710649 A-TT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64316 3 +     67721 c-tt
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 13
s Myotis_brandtii.KE162005.1                               9794677 3 +  10118263 a-tt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388854 3 +   6019432 a-tt
i Myotis_davidii.KB100139.1                              C 0 I 7
s Myotis_lucifugus.GL429869.1                               384880 3 +   4330536 a-tt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3665 3 +     18357 a-tt
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121012 3 +    130748 a-tc
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 14
s Nannospalax_galili.KL204047.1                             947940 3 +   3037898 A-TT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30619 3 +     34575 A-TT
i Nasalis_larvatus.k141_1350636                          C 0 I 53
s Neophocaena_asiaeorientalis.KZ687982.1                   1233498 3 -   7148211 g-tt
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 10
s Noctilio_leporinus.NocLep_scaffold_7894                   129161 3 -    149072 a-tt
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54963 3 -    132029 a-tt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11058 3 -     16345 a-tt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16943 3 +     22201 a-tt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415164 3 -  22158432 a-tt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27341 3 -     54323 a-tt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199363 3 +   9404916 a-tt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 10
s Nycticebus_bengalensis.LG01                             93639433 3 + 196305487 a-tt
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             2036 3 -      9413 a-tt
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566816 3 - 199412804 a-tt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558131 3 -   3988456 A-CG
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056406 3 -  11899542 a-tt
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453155 3 +   2017862 a-tt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437953 3 -    630418 A-TT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16144 3 +    150152 a-tt
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95742 3 -    140218 A-TG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 11
s Onychomys_torridus.OnyTor_scaffold_28377                    6288 3 -     41509 A-TG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 11
s Orcinus_orca.KB316932.1                                  8103900 3 +  10937097 g-tt
i Orcinus_orca.KB316932.1                                C 0 I 10
s Orycteropus_afer.OryAfe_flattened_line_201229               1196 3 +     11607 a-tt
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 I 11
s Otocyon_megalotis.JAEUCK010005147.1                        40406 3 +    559221 a-tt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 10
s Otolemur_crassicaudatus.k141_649260                        41987 3 -     51505 a-gg
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354992 3 +   1103335 a-tG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405855 3 -  44047080 a-tt
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6374 3 +     17875 a-tt
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1474060 3 - 189151597 A-TT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25756 3 -    230217 a-tt
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463082 3 -  18783137 a-tt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973741 3 +   8748460 a-tt
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617380 3 +   2937107 a-tt
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16338 3 +     78924 a-tt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28319 3 +     31479 a-tt
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20687 3 -     24908 a-tt
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3142 3 +      9367 A-TG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249511 3 +  18517816 A-TG
i Peromyscus_maniculatus.KI615324.1                      C 0 I 11
s Petromus_typicus.PetTyp_scaffold_17301                     33183 3 -     56120 a-tt
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 13
s Phocoena_phocoena.PhoPho_flattened_line_24159               5426 3 -     63832 g-tt
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 10
s Piliocolobus_badius.k141_2704958                            3982 3 +     55023 A-TT
i Piliocolobus_badius.k141_2704958                       C 0 I 127
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5248 3 +     22231 a-tt
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66023 3 +    207309 g-tt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7111 3 -     25401 g-tt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32859 3 +     58159 g-tt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33135 3 +     63561 g-tt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32895 3 +     51148 a-tt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557865 3 -   4542175 g-tt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32879 3 +     51125 g-tt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2443 3 +     19503 G-TT
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 10
s Plecturocebus_bernhardi.k141_2549090                        9297 3 +     39866 a-tt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4379 3 -      9282 a-tt
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43783 3 -     87950 a-tt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44177 3 -     88961 a-tt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8875 3 -     39403 a-tt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43826 3 +     87928 a-tt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8874 3 -     60166 a-tt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15811 3 -     67232 a-tt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43727 3 -     90634 a-tt
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45194 3 +     89403 a-tt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179173 3 - 189387572 A-TT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193990 3 -   9816681 a-tt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29130 3 +     69807 A-TT
i Presbytis_comata.k141_1230337                          C 0 I 186
s Presbytis_mitrata.k141_584736                              46311 3 -     80239 A-TT
i Presbytis_mitrata.k141_584736                          C 0 I 124
s Procavia_capensis.ProCapCap_scaffold_165387                 5457 3 +      7663 a-tt
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 11
s Prolemur_simus.MPIZ01000396.1                            1983876 3 +   4620579 a-TT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39562 3 +     52041 a-tg
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53445 3 -     66298 a-tt
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5932 3 -     18639 A-TT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842045 3 -  28871421 a-tt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538560 3 -   4952924 a-tt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100396 3 +  38429054 a-tt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28565 3 +     91421 A-TT
i Pygathrix_cinerea.k141_1153803                         C 0 I 56
s Pygathrix_nigripes_b.ctg100                                  155117 3 -   7812017 A-TT
i Pygathrix_nigripes_b.ctg100                               C 0 I 56
s Pygathrix_nigripes_a.k141_215492                              9422 3 +     72585 A-TT
i Pygathrix_nigripes_a.k141_215492                         C 0 I 56
s Rangifer_tarandus.RanTarSib_scaffold_29815                 54868 3 +     55069 A-TT
i Rangifer_tarandus.RanTarSib_scaffold_29815             C 0 N 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916014 3 +   3329780 a-tt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3084 3 +      7119 A-TT
i Rhinopithecus_bieti.k119_778604                        C 0 I 56
s Rhinopithecus_roxellana.NC_044550.1                    104123699 3 + 195417433 a-tt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 56
s Rhinopithecus_strykeri.ctg102                             237926 3 -   7961872 A-TT
i Rhinopithecus_strykeri.ctg102                          C 0 I 56
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76545 3 -    116970 a-tt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                252 3 -      1130 g-tt
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5154 3 +      6077 g-tt
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5247 4 +      5971 attt
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5165 3 +      5932 a-tt
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3510 3 -      4390 a-tt
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393267 3 - 209938924 g-tt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5113 3 +      5979 a-tt
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1683 3 -     22275 g-tt
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9543 3 +     16473 a-tt
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110276 3 + 121099817 A-TT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31843 3 -     47369 a-tt
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32229 3 -     79414 a-tt
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28920 3 -     34454 a-tt
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16321 3 -     22428 a-tt
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31475 3 -     47109 a-tt
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239527 3 +   5703754 a-tt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9117 3 +     21866 a-tt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_johnii.k141_843753                           16898 3 -     45317 A-TT
i Semnopithecus_johnii.k141_843753                       C 0 I 56
s Semnopithecus_priam.k141_714795                            24556 3 -     42441 A-TT
i Semnopithecus_priam.k141_714795                        C 0 I 56
s Semnopithecus_schistaceus.k141_1432920                     27234 3 -     29113 A-TT
i Semnopithecus_schistaceus.k141_1432920                 C 0 I 56
s Semnopithecus_vetulus.k141_244474                          30309 3 -     48123 A-TT
i Semnopithecus_vetulus.k141_244474                      C 0 I 56
s Sigmodon_hispidus.SigHis_scaffold_20193                    51308 3 +     77746 A-CG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1869650 3 +   3870691 a-ct
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8007 3 -     97271 a-tt
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126174 3 +    196729 a-gt
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645214 3 +  69701581 a-tt
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392429 3 +   1523678 a-tt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4004 3 +      5583 a-tg
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 14
s Tapirus_indicus.TapInd_scaffold_7432                      192898 3 +    199430 a-tc
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106866 3 -    539355 a-tc
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1940 3 +      9917 a-tt
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8738 3 +     20590 a-tt
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25336 3 -     33621 a-tt
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 13
s Tolypeutes_matacus.TolMat_scaffold_31955                   20961 3 -     31044 a-tt
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 13
s Tonatia_saurophila.TonSau_scaffold_294                    481443 3 -    610378 a-tt
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22365 3 +     26378 A-TT
i Trachypithecus_auratus.k141_1189070                    C 0 I 56
s Trachypithecus_crepusculus.k141_539312                     35109 3 -     78344 A-TT
i Trachypithecus_crepusculus.k141_539312                 C 0 I 56
s Trachypithecus_cristatus.k141_180416                       21690 3 +     25722 A-TT
i Trachypithecus_cristatus.k141_180416                   C 0 I 56
s Trachypithecus_francoisi.k141_1453105                      30065 3 -     62838 A-TT
i Trachypithecus_francoisi.k141_1453105                  C 0 I 56
s Trachypithecus_geei.k141_1001272                           30109 3 +     46913 A-TT
i Trachypithecus_geei.k141_1001272                       C 0 I 56
s Trachypithecus_germaini.k141_57262                         10848 3 -     28527 A-TT
i Trachypithecus_germaini.k141_57262                     C 0 I 56
s Trachypithecus_hatinhensis.k141_31479                      32000 3 -     64340 A-TT
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 56
s Trachypithecus_laotum.k141_928651                          30038 3 -     63452 A-TT
i Trachypithecus_laotum.k141_928651                      C 0 I 56
s Trachypithecus_leucocephalus.k141_96450                    11485 3 +     22490 A-TT
i Trachypithecus_leucocephalus.k141_96450                C 0 I 56
s Trachypithecus_melamera.k141_591572                         4908 3 -      6147 A-TT
i Trachypithecus_melamera.k141_591572                    C 0 I 56
s Trachypithecus_obscurus.k141_848057                        11821 3 -     13050 A-TT
i Trachypithecus_obscurus.k141_848057                    C 0 I 56
s Trachypithecus_phayrei.ctg124                             256983 3 -   6242583 A-TT
i Trachypithecus_phayrei.ctg124                          C 0 I 56
s Trachypithecus_pileatus.k141_2622778                        3079 3 +     19340 A-TT
i Trachypithecus_pileatus.k141_2622778                   C 0 I 56
s Tragulus_javanicus.TraJav_scaffold_3462                   175154 3 -    200418 a-tt
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482825 3 -  10818551 a-tt
i Trichechus_manatus.JH594705.1                          C 0 I 11
s Tupaia_chinensis.KB320699.1                              1836368 3 -   4065304 a-at
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10404 3 -     70247 a-at
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367025 3 -  33153633 g-tt
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 10
s Ursus_maritimus.KK499267.1                                183375 3 +   5085361 g-tt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26529 3 -     30710 a-tt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25436 3 -    147434 a-tt
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77576 3 +   5488506 A-TT
i Vicugna_pacos.KN270157.1                               C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_12041                106129 3 -    112863 A-TT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 10
s Xerus_inauris.XerIna_scaffold_2302                        175406 3 -    224448 a-tt
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30367 3 -     86975 a-tt
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1217 3 -      1899 A-TT
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Sorex_araneus.JH798187.1                                 4672515 9 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667373 0 +   7059049 C
e Crocidura_indochinensis.CroInd_scaffold_77846              11014 0 +     12657 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    4816 0 -     21056 C
e Theropithecus_gelada.CM009954.1                           354612 59 - 186847797 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15594 0 +     22964 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1865419 0 -   1910179 C
e Semnopithecus_hypoleucos.k141_1910531                      30309 150 +     58920 I
e Semnopithecus_entellus.k141_158471                         26797 65 +     27374 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955 0 +    313613 C
e Rattus_norvegicus.chr16                                 37024043 457 -  90668790 I
e Propithecus_verreauxi.k141_1047036                          9586 0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       95947 0 -     98465 C
e Propithecus_perrieri.k141_1496898                          35668 0 +     46564 C
e Propithecus_edwardsi.k141_635656                            9354 0 -     30655 C
e Propithecus_diadema.k141_153680                             5617 0 -     11706 C
e Propithecus_coronatus.k141_209299                           5020 0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1567382 0 -   2598838 C
e Piliocolobus_tephrosceles.PDMG02000141.1                  255762 85 +  14605196 I
e Piliocolobus_kirkii.k141_1310104                            4087 85 +     40849 I
e Piliocolobus_gordonorum.k141_381342                         3497 85 -     89929 I
e Papio_ursinus.k141_5784434                                   367 59 -     10386 I
e Papio_papio.k141_3538738                                     407 59 +     10553 I
e Papio_kindae.k141_2214839                                  23736 59 -     27687 I
e Papio_hamadryas.Contig39                                  293831 59 -  20919399 I
e Papio_cynocephalus.k141_1507553                            11088 59 +     21308 I
e Papio_anubis.CM001495.2                                   244803 59 - 183742232 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Mandrillus_sphinx.Contig270                               358625 59 -    752769 I
e Mandrillus_leucophaeus.scaffold280                        323794 59 +  24302211 I
e Macaca_tonkeana.k141_339739                                 4304 59 +     17132 I
e Macaca_thibetana.k99_45532                                  1144 59 -      5049 I
e Macaca_silenus.Contig273                                  272506 59 +    668171 I
e Macaca_siberu.k141_2185972                                 46598 59 +     59329 I
e Macaca_radiata.k141_2139468                                 2657 59 +     14901 I
e Macaca_nigra.k141_2818840                                  50126 59 -     62418 I
e Macaca_nemestrina.KQ007038.1                              400954 59 +  25927173 I
e Macaca_mulatta.NC_041758.1                                416724 59 - 187317192 I
e Macaca_maura.k141_1103459                                  47521 59 +     51645 I
e Macaca_leonina.k141_321385                                 37777 59 -     50087 I
e Macaca_fuscata.k119_546792                                 26601 59 +     30527 I
e Macaca_fascicularis.k141_1617581                            1486 59 -      5035 I
e Macaca_cyclopis.k119_263443                                26648 59 +     30207 I
e Macaca_assamensis.Contig5                                 374380 59 -  60120075 I
e Macaca_arctoides.k141_1757516                              46718 59 -     61512 I
e Lophocebus_aterrimus.ctg367                               335329 59 -   1826925 I
e Indri_indri.k141_2415743                                    3631 0 +     11955 C
e Condylura_cristata.JH655891.1                           35808250 0 +  53390261 C
e Cercocebus_torquatus.k141_2159127                          46000 59 -    148725 I
e Cercocebus_lunulatus.k141_2500334                           1616 59 -     14410 I
e Cercocebus_chrysogaster.k141_1522556                       46183 59 +     47900 I
e Cercocebus_atys.KQ010504.1                                142444 59 -   4669795 I
e Avahi_peyrierasi.k141_1823318                               7496 0 -     19611 C
e Avahi_laniger.k141_2756659                                  7488 0 +     11645 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6719 29 +     36723 T---GCT--------G-----A-TC--TT-A---TTGTT---TTCTAG---GCAC-T--GT
s Acinonyx_jubatus.LLWD01001279.1                           814140 31 +   1699592 t---gct--------t---agc-tc--tg-a-t-aa-tt---tttgag---gact-t--gt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27400 29 +     63021 T---TTT--------G---ATC-TCT-TT-A---TT------TGACAG---GCAT-C--AT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416601 31 +  29979442 t---tct--------t---atc-tc--tt-a-t-ta-tt---tgtgag---gaat-t--gt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216939 25 +    347723 t---gct--------t---atc-tc--tt-a-t-ta-tt---tgtgag---g---------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19779 29 -     61208 t---gtt--------g---atc-tg--ataa---ct------tgccag---gcac-t--gc
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49423 29 +     53615 t---gct--------g-----a-tc--gt-a---ttgtt---tgctag---gcac-t--gt
i Allenopithecus_nigroviridis.k141_3755588               I 59 C 0
s Allochrocebus_lhoesti.k141_3412094                          1454 29 +     13857 t---gct--------g-----a-tc--gt-a---ttgtt---tgctag---gcac-t--gt
i Allochrocebus_lhoesti.k141_3412094                     I 59 C 0
s Allochrocebus_preussi.k141_1993939                         18005 29 -     21945 t---gct--------g-----a-tc--gt-a---ttgtt---tgctag---gcac-t--gt
i Allochrocebus_preussi.k141_1993939                     I 59 C 0
s Allochrocebus_solatus.k141_3554717                         19690 29 +     32033 t---gct--------g-----a-tc--gt-a---ttgtt---tgctag---gcac-t--gt
i Allochrocebus_solatus.k141_3554717                     I 59 C 0
s Alouatta_belzebul.k141_1011583                             73468 29 -     84148 t---gtt--------g-----a-tc--tt-a---ttgtt---tgctgt---gcac-t--gt
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45707 29 -     78289 t---gct--------g-----a-tc--tt-a---ttgtc---ttctat---gcac-t--gt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45146 29 +     55831 t---gct--------g-----a-tc--tt-a---ttgtt---tgctgt---gcac-t--gt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43596 29 -     64179 t---gct--------g-----a-tc--tt-a---ttgtt---tgctat---gcac-t--gt
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            703 29 -      3959 t---gct--------g-----a-tc--tt-a---ttgtt---tgctat---gcac-t--gt
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42221 29 +     45454 t---gct--------g-----a-tc--tt-a---ttgtt---tgctat---gcac-t--gt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47870 29 +     70886 t---gct--------g-----a-tc--tt-a---ttgtt---tgctat---gcac-t--gt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10043 29 +     30854 t---gct--------g-----a-tc--tt-a---ttgtt---tgctat---gcac-t--gt
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34177 29 +     42133 t---gct--------g-----a-tc--tt-a---ttgtt---tgctat---gcac-t--gt
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1586991 30 +   2318259 t---gtt--------t---acc-ta--tt-ac--ta-tt---tgctag---gaac-t--g-
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178409 28 -    412891 a---gtt--------t---atc-tc--tt-a-t-----t---tgttaa---ggag-t--gt
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52068 30 -     68529 t---gtt--------t---atc-ta--tt-ac--aa-tt---tgctag---gaac-t--g-
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2435 29 +     17741 t---gct--------g-----g-tc--tt-a---ctgtt---tgctag---gcac-t--gt
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3060 29 -     15923 t---gct--------g-----g-tc--tt-a---ctgtt---tgctag---gcac-t--gt
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673342 29 +   5030052 T---GCT--------G-----G-TC--TT-A---CTGtt---tgctag---gcac-t--gt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3336 29 -     16391 t---gct--------g-----g-tc--tt-a---ctgtt---tgctag---gcac-t--gt
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2895 29 -     17186 t---gct--------g-----g-tc--tt-a---ctgtt---tgctag---gcac-t--gt
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17407 31 -     32367 t---gtt--------g---atc-tc--tt-c---tt---attcaccag---gcaa-t--gt
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21467 30 -     45910 t---g-t--------g---atc-tc--tt-a---tcatt---tgccag---gcac-t--gt
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6667 28 -     15198 a---gtt--------t---atc-tc--tc-ac------t---tgttaa---gaag-c--at
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275933 29 +  21539123 t---gct--------g-----a-tc--tt-a---ctgtt---tgctag---gcac-t--gt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12100 29 +     48076 t---gct--------g-----a-tc--tt-a---ctgtt---tgctag---gcac-t--gt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7235 29 -     28759 t---gct--------g-----a-tc--tt-a---ctgtt---tgctag---gcac-t--gt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34790 29 +     44353 t---gct--------g-----a-tc--tt-a---ctgtt---tgctag---acac-t--gt
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50160 29 -     71267 t---gct--------g-----a-tc--tt-a---ctgtt---tgctag---gcac-t--gt
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24218 29 -     33135 t---gct--------g-----a-tc--tt-a---ctgtt---tgctag---gcac-t--gt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7488 23 +     11645 -----------------------Tc--tt-g---ccatt---tgccag---gcac-t--gt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7496 23 -     19611 -----------------------Tc--tt-g---ccatt---tgccag---gcac-t--gt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964762 19 -  23207421 ------------------------------a-t-ta-tt---tgctag---gacg-t--gt
i Balaenoptera_acutorostrata.KI537508.1                  I 10 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1262 19 -     25979 ------------------------------a-t-ta-tt---tgctag---gacg-t--gt
i Balaenoptera_bonaerensis.DF411050.1                    I 10 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     87997 30 +    124022 t---gtt--------t---acc-ta--tt-ac--ta-tt---tgctag---tgac-t--g-
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23531 27 +    288883 ------t--------t---atc-ta--ct-ac--ta-tt---tgctag---gaat-t--g-
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357921 27 +  48749331 ------t--------t---atc-ta--ct-ac--ta-tt---tgctag---gaat-t--g-
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756485 27 +   1948126 ------t--------t---atc-ta--ct-ac--ta-tt---tgctag---gaat-t--g-
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546627 27 -  45695690 ------t--------t---atc-ta--ct-ac--ta-tt---tgctag---gaat-t--g-
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531635 27 -   4408762 ------t--------t---acc-ta--tt-ac--ta-tt---tgctag---aaat-t--g-
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9027 29 +     28062 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44321 29 -     91139 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21847 29 +     95584 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21760 29 +    119600 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11415 29 +     18648 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---ggac-t--gt
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10931 29 -     13885 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3017 29 -      8861 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---ggac-t--gt
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455409 29 + 189096842 T---GCT--------G-----G-TC--TT-A---TTGTT---TGCTAG---GGAC-T--GT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2932 29 +      8664 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---ggac-t--gt
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632247 15 +  17673402 -----------------------tc--tt-a-t-ta-tt---tgCTA--------------
i Camelus_bactrianus.KN276810.1                          I 2 C 0
s Camelus_dromedarius.KN272107.1                           4666534 15 +   7040546 -----------------------tc--tt-a-t-ta-tt---tgCTA--------------
i Camelus_dromedarius.KN272107.1                         I 2 C 0
s Camelus_ferus.KB017975.1                                 1210192 15 +   1652518 -----------------------tc--tt-a-t-ta-tt---tgCTA--------------
i Camelus_ferus.KB017975.1                               I 2 C 0
s CanFam4.chr16                                           42506508 19 +  60362399 ------------------------------a-t-ta-tt---tgtgag---gaat-t--gt
i CanFam4.chr16                                          I 10 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10144 19 -     23171 ------------------------------a-t-ta-tt---tgtgag---gaat-t--gt
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 10 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223487 19 +   9314153 ------------------------------a-t-ta-tt---tgtgag---gaat-t--gt
i Canis_lupus_dingo.QKWQ01000480.1                       I 10 C 0
s Canis_lupus_familiaris.chr16                            41616622 19 +  59632846 ------------------------------a-t-ta-tt---tgtgag---gaat-t--gt
i Canis_lupus_familiaris.chr16                           I 10 C 0
s Canis_lupus_orion.HG994398.1                            45108203 19 -  63665305 ------------------------------a-t-ta-tt---tgtgag---gaat-t--gt
i Canis_lupus_orion.HG994398.1                           I 10 C 0
s Capra_aegagrus.CM003241.1                               27410720 30 -  46296322 t---gtt--------t---acc-ta--tt-ac--ta-tt---tgctag---gaac-t--g-
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26592994 30 +  44709034 t---gtt--------t---acc-ta--tt-ac--ta-tt---tgctag---gaac-t--g-
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    731 12 -      1607 T---ACT--------A--C-TC-TC--TT--------------------------------
i Capromys_pilorides.CapPil_scaffold_762519              C 0 I 16
s Carlito_syrichta.NW_007259797.1                           271717 31 +    496798 T---GTT--------GT---TC-TC--TC-A---CTGTT---TGCTAG---GTAC-T--GT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1537 28 +      9923 a---gtt--------t---atc-tc--tt-ac------t---tgttaa---caag-c--at
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28896 31 -     39886 t---gtg--------t---att-tc--tt-actata------tgacag---gcac-t--gt
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80820 29 -    217609 -----TT--------T---ACC-TT--tt-a-t-ta-tt---tggtag---gaac-t--gt
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997641 15 +  23392119 ----------------------------------tt------tattag---gcac-c--at
i Cavia_aperea.AVPZ01000300.1                            I 12 C 0
s Cavia_porcellus.DS562891.1                               5001083 15 +  23407841 ----------------------------------tt------tattag---gcac-c--at
i Cavia_porcellus.DS562891.1                             I 12 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64162 15 -     66877 ----------------------------------tt------tattag---gcac-c--at
i Cavia_tschudii.CavTsc_scaffold_23560                   I 12 C 0
s Cebuella_niveiventris.k141_592277                           6330 29 -     12580 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---ggac-t--gt
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44388 29 +     53515 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---ggac-t--gt
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374156 29 -  26074798 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gctc-t--gt
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9210 29 -     34880 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gctc-t--gt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68306 29 -     89041 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gctc-t--gt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3678 31 -      5494 t---gtt--------g---ttc-tc--tc-a---ctgtt---tgccag---gtac-t--gt
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493439 29 -  27778364 t---gtt--------t---atc-t----c-a-t-ta-tt---tgctag---gaag-t--gg
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20272 29 +     27315 T---GTT--------T---ATc-t----c-a-t-ta-tt---tgctag---gaag-t--gg
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142503 29 -   4669795 t---gcT--------G-----A-TC--AT-A---TTGtt---tgctag---gcac-t--gt
i Cercocebus_atys.KQ010504.1                             I 59 C 0
s Cercocebus_chrysogaster.k141_1522556                       46242 29 +     47900 t---gct--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Cercocebus_chrysogaster.k141_1522556                   I 59 C 0
s Cercocebus_lunulatus.k141_2500334                           1675 29 -     14410 t---gct--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Cercocebus_lunulatus.k141_2500334                      I 59 C 0
s Cercocebus_torquatus.k141_2159127                          46059 29 -    148725 t---gct--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Cercocebus_torquatus.k141_2159127                      I 59 C 0
s Cercopithecus_ascanius.k141_3120866                        28337 29 -     40656 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Cercopithecus_ascanius.k141_3120866                    I 59 C 0
s Cercopithecus_cephus.k141_4183004                           8301 29 +     20796 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Cercopithecus_cephus.k141_4183004                      I 59 C 0
s Cercopithecus_diana.k141_132293                            13410 29 -     17524 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Cercopithecus_diana.k141_132293                        I 53 C 0
s Cercopithecus_hamlyni.k141_566925                          29142 29 -     34525 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Cercopithecus_hamlyni.k141_566925                      I 59 C 0
s Cercopithecus_lowei.k141_2101310                           12922 29 -     25376 t---gct--------g-----a-tt--tt-a---ttgtt---tgctag---gcac-t--gt
i Cercopithecus_lowei.k141_2101310                       I 59 C 0
s Cercopithecus_albogularis.ctg5                                  365509 29 -  39242232 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Cercopithecus_albogularis.ctg5                               I 59 C 0
s Cercopithecus_mona.ctg39                                  271236 29 +  21565898 t---gct--------g-----a-tt--tt-a---ttgtt---tgctag---gcac-t--gt
i Cercopithecus_mona.ctg39                               I 59 C 0
s Cercopithecus_neglectus.k141_858615                        33601 29 -     45857 t---gct--------g-----a-tt--tt-a---ttgtt---tgctag---gcat-t--gt
i Cercopithecus_neglectus.k141_858615                    I 56 C 0
s Cercopithecus_nictitans.k141_2995370                       28505 29 -     32606 t---gct--------g-----a-tt--tt-a---ttgtt---tgctag---gcac-t--gt
i Cercopithecus_nictitans.k141_2995370                   I 59 C 0
s Cercopithecus_petaurista.k141_42573                         4667 29 +      8499 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Cercopithecus_petaurista.k141_42573                    I 59 C 0
s Cercopithecus_pogonias.k141_6079                           27063 29 +     70610 t---gct--------g-----a-tt--tt-a---ttgtt---cgctag---gcac-t--gt
i Cercopithecus_pogonias.k141_6079                       I 59 C 0
s Cercopithecus_roloway.k141_3012935                         24024 29 +     36323 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Cercopithecus_roloway.k141_3012935                     I 59 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13881 17 -     19938 ----------------------------------tg-tc---tgctag---gcac-t--gt
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 3 C 0
s Cheirogaleus_major.k141_666340                             31875 31 -     33796 t---gtt--------g---ctc-tc--tt-g---ctatt---tgccag---gcac-t--gt
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6389 31 -     15404 t---gtt--------g---ctt-tc--tt-g---ctatt---tgccag---gcac-t--gt
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10135 29 -     32913 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20548 29 -     40346 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20803 29 +    216457 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20592 29 +     39636 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239975 14 -   2543920 ----------------------------------t-------tatcaa---gcac-t--gt
i Chinchilla_lanigera.JH722012.1                         I 12 C 0
s Chiropotes_albinasus.k141_2628359                            255 29 +      1057 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43658 29 -    112038 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9209 29 +     34062 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344925 29 +  18827391 t---gct--------g-----a-tc--gt-a---ttgtt---tgctag---gcac-t--gt
i Chlorocebus_aethiops.ctg25                             I 59 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11464 29 -     44032 t---gct--------g-----a-tc--gt-a---ttgtt---tgctag---gcac-t--gt
i Chlorocebus_pygerythrus.k141_3063162                   I 59 C 0
s Chlorocebus_sabaeus.CM001947.1                            306316 29 - 135778131 T---GCT--------G-----A-TC--GT-A---TTGtt---tgctag---gcac-t--gt
i Chlorocebus_sabaeus.CM001947.1                         I 59 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  142 19 +     10270 ----------------------------------tg-tt---tggtag---gcac-tttga
i Choloepus_didactylus.ChoDid_scaffold_147047            I 14 C 0
s Choloepus_hoffmanni.KN194906.1                            607618 19 -    839153 ----------------------------------tg-tt---tggtag---gcac-tttga
i Choloepus_hoffmanni.KN194906.1                         I 14 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_4313612                48 17 +       302 ----------------------------------tg-tt---tgccag---atac-t--gt
i Chrysochloris_asiatica.ChrAsi_scaffold_4313612         I 11 C 0
s Colobus_angolensis.KN981557.1                             410724 29 -   2368649 t---gct--------G-----A-TT--GT-A---TTGtt---tgctag---gcac-t--gt
i Colobus_angolensis.KN981557.1                          I 127 C 0
s Colobus_guereza.LG01                                      380605 29 - 200372422 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Colobus_guereza.LG01                                   I 127 C 0
s Colobus_polykomos.k141_906115                               4162 29 -     84244 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Colobus_polykomos.k141_906115                          I 127 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4024 28 -      8242 A---GTT--------T---ATC-Tc--tt-a-t-----t---tgttag---gaat-t--gt
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46078 29 -     83289 t---gtt--------g---atg-ta-ttt-a---tc------tgacag---gcac-c--at
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117783 14 - 224834208 -----------------------------------t------tgacag---gcac-c--at
i Cricetulus_griseus.LT883664.1                          I 11 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              11014  9 +     12657 ------T--------T---ATTGTG--T---------------------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 9
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5593 31 +     87169 t---gct--------t---agc-tc--tg-a-t-ta-tt---tttgag---gaat-t--gt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646637 26 -   1526836 a---a----------a---atc-ca--ac-a---ct------tgtcaa---cctc-t--gt
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5552 15 +     36344 ----------------------------------tt------tatcaa---gcac-t--gt
i Cuniculus_paca.CunPac_flattened_line_7025              I 12 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29336 15 +     75252 ----------------------------------tt------tatcaa---gcac-t--gt
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 12 C 0
s Dasypus_novemcinctus.JH564415.1                          2111248 17 -   2246927 ----------------------------------tg-tc---cgctag---gcac-t--gt
i Dasypus_novemcinctus.JH564415.1                        I 14 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19801 12 +     50838 C---ACT--------G---ATC-TC--TT--------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 17
s Daubentonia_madagascariensis.ctg71                        293793 31 +  12879189 t---gtt--------g---atc-tc--tt-a---ctgtt---tgccag---gtac-t--gt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633168 19 -  35494412 ------------------------------a-t-ta-tt---tgctag---gaca-t--gt
i Delphinapterus_leucas.KZ290073.1                       I 10 C 0
s Desmodus_rotundus.KZ672289.1                            11866526 28 -  20541912 A---GTT--------T---ATA-Tc--tt-ac------t---tgttaa---gaag-t--ct
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665711 29 -   1390856 T---GTT--------T---ATc-t----c-a-t-ta-tt---tgctag---gaag-t--gt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140511 29 -    198055 t---gtt--------t---atc-t----c-a-t-ta-tt---tgctag---gaag-t--gg
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100036 11 -    115145 T----CT--------G---ATC-TC--TT--------------------------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 15
s Dipodomys_ordii.KN672350.1                              18951803 28 -  37912305 t---gtc--------a---atc-tc--tt-a---tg------catcag---gcac-t--gt
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6737 28 -     10735 T---GTC--------A---ATC-TT--TT-A---TG------CATCAG---GCAC-T--GT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856765 17 - 111700974 ----------------------------------tg-CT---TGCCAG---ACAA-C--AA
i Echinops_telfairi.JH980293.1                           I 11 C 0
s Eidolon_helvum.AWHC01266696.1                               7499 27 +     19438 a---gtt--------t---atc-tc--tt-a-t-tg--------ttag---aaac-t--at
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241348 30 -    607251 t---gtt--------t---acc-tc--tt-ac--ta-tt---tgctag---gaac-t--g-
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226971 17 +  10337057 ----------------------------------ta-tt---tgctgg---gcac-t--gt
i Elephantulus_edwardii.JH947257.1                       I 11 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33634 14 +    110024 -----------------------------------t------tgacag---gcac-c--gt
i Ellobius_lutescens.LOEQ01008920.1                      I 11 C 0
s Ellobius_talpinus.LOJH01026522.1                           15637 14 +     18970 -----------------------------------t------tgacag---gcac-t--at
i Ellobius_talpinus.LOJH01026522.1                       I 11 C 0
s Enhydra_lutris.KZ291758.1                               24917350 19 +  41312741 ------------------------------ac--ta-tt---tgtgag---aaat-t--gt
i Enhydra_lutris.KZ291758.1                              I 8 C 0
s Eptesicus_fuscus.JH977646.1                             12580116 31 +  14770903 a---att--------t---atc-tc--tt-a-t-ta-tt---tgttag---gaag-t--gt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042656 29 -   4378816 t---gtt--------t---atc-t----c-a-t-tc-tt---tgccag---gaac-t--gt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376594 29 +  39960074 t---gtt--------t---atc-t----c-a-t-tc-tt---tgccag---gaac-t--gt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412576 29 -    498745 t---gtt--------t---atc-t----c-a-t-tc-tt---tgccag---gaac-t--gt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667373 35 +   7059049 ------TGCTAacatt---tgc-ta--tt-t-t-ta-tt---tggtag---gaat-t--g-
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264461 29 +  21539334 t---gct--------g-----a-tc--gt-a---ttgtt---tgctag---gcac-t--gt
i Erythrocebus_patas.Contig38                            I 59 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72376 19 -    133382 ------------------------------a-t-ta-tt---tgctag---gaca-t--gt
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 10 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114                89 19 +     25849 ------------------------------a-t-ta-tt---tgctag---gacg-t--gt
i Eubalaena_japonica.EubJap_flattened_line_57114         I 10 C 0
s Eulemur_albifrons.k141_51491                               16009 31 -     24895 t---ggt--------g---ctc-tc--tt-g---ctgtt---tgccag---gcac-t--gt
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43719 31 -     70999 t---ggt--------g---ctc-tc--tt-g---ctgtt---tgccag---gcac-t--gt
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87689 31 +    112731 t---ggt--------g---ctc-tc--tt-g---ctgtt---tgccag---gcac-g--gt
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44252 31 +     68309 t---ggt--------g---ctc-tc--tt-g---ctgtt---tgccag---tcac-t--gt
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54576 31 -     65740 t---ggt--------g---ctc-tc--tt-g---ctgtt---tgccag---gcac-t--gt
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25209 31 -     75513 t---ggt--------g---ctc-tc--tt-g---ctgtt---tgccag---tcac-t--gt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49403 31 -     97555 t---ggt--------g---ctc-tc--tt-g---ctgtt---tgccag---gcac-t--gt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6127 31 +     30972 t---ggt--------g---ctc-tc--tt-g---ctgtt---tgccag---ccac-t--gt
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43847 31 -     52037 t---ggt--------g---ctc-tc--tt-g---ctgtt---tgccag---gcac-t--gt
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60250 31 -    111500 t---ggt--------g---ctc-tc--tt-g---ctgtt---tgccag---gcac-t--gt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248050 31 - 206538554 t---gct--------t---agc-tc--tg-a-t-aa-tt---tttgag---gact-t--gt
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117836 31 - 205367284 T---GCT--------T---AGC-TC--TG-A--TAA-TT---TTTGAG---GACT-T--GT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28936 31 -     30238 T---GCT--------T---AGC-TC--TG-A--TAA-TT---TTTGAG---GACT-T--GT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923194 15 -   3816255 ----------------------------------tt------tctcaa---gcac-t--gt
i Fukomys_damarensis.KN121974.1                          I 13 C 0
s Galago_moholi.ctg3793                                     126831 30 -    137831 t---g-t--------g---atc-tc--tt-a---ccatt---tgccag---gcac-t--gt
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10376 30 +     22493 t---g-t--------g---atc-tc--tt-a---ccatt---tgccag---gcac-t--gt
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22459 30 -     32986 t---g-t--------g---atc-tc--tt-a---ccatt---tgccag---gcac-t--gt
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2396 31 -     28519 t---gtc--------g---att-tc--tt-a---ttgtt---ttccag---gcac-t--gt
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93065 30 -     95226 t---gtt--------t---acc-ta--tt-ac--ta-tt---tgctag---gaac-t--g-
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2537 31 -      6791 t---gtt--------g---atc-tc--tt-a---tt---atttgtcag---gcac-t--gc
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               7028 29 -      8343 t---gct--------g-----a-tc--tt-a---ttgtt---ttctag---gcac-t--at
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 72521 29 +  33314783 t---gct--------g-----a-tc--tt-a---ttgtt---ttctag---gcac-t--gt
i Gorilla_gorilla.LT578336.1                             I 156 I 52
s Graphiurus_murinus.GraMur_scaffold_10447                    3603 31 -     78134 t---gtt--------g---att-tg--tt-a---tt---atttgccag---gcac-t--gc
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15934 31 -     40692 t---ggt--------g---ccc-tc--tt-g---ccatt---tgccag---gcac-t--gt
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37333 31 +     49394 t---ggt--------g---ccc-tc--tt-g---ccatt---tgccag---gcac-t--gt
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62204 31 -     66874 t---ggt--------g---ccc-tc--tt-g---ccatt---tgccag---gcac-t--gt
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11075 31 -     42923 t---ggt--------g---ccc-tc--tt-g---ccatt---tgccag---gcac-t--gt
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18077 31 -     53142 t---ggt--------g---ccc-tc--tt-g---ccatt---tgccag---gcac-t--gt
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32026 31 -    327341 t---gct--------t---agc-tt--tg-a-t-ta-tt---tttgag---gaat-t--gg
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10731 30 +     48891 t---gtt--------t---gcc-ta--tt-ac--ta-tt---cgctag---gaac-t--g-
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933613 15 -  22651954 ----------------------------------tt------tgtcaa---gcac-c--gt
i Heterocephalus_glaber.JH602082.1                       I 13 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1480 17 +      8654 ----------------------------------tg-tt---taccgg---gcac-t--gt
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 11 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8872 31 -     36432 t---gtc--------c---acc-tc--tt-a-t-ta-tt---tactag---gaac-t--gt
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552867 28 -   1711038 a---gtt--------t---atC-TC--Tt-a-t-t-------tgttag---gaat-t--gt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2304 28 -      2730 A---GTT--------T---ATC-Tc--tt-a-t-t-------tgttag---gaat-t--gt
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144035 29 -    630532 t---gct--------g-----a-tc--tt-a---ttgtt---ttctag---gaac-t--gt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71399 31 +     83186 t---gct--------t---aac-tc--tg-a-t-ta-tt---tttgag---gaat-t--gt
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73039 14 +    143317 -----------------------------------t------cattag---gtac-t--gt
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 11 C 0
s Hylobates_agilis.k141_1155965                               7080 29 +     12352 t---gct--------g-----a-tc--tt-a---ttgtt---ttctag---gcac-t--gt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14264 29 +     55766 t---gct--------g-----a-tc--tt-a---ttgtt---ttctag---gcac-t--gt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053864 29 + 191637585 t---gct--------g-----a-tc--tt-a---ttgtt---ttctag---gcac-t--gt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802742 29 +  11177569 t---gct--------g-----a-tc--tt-a---ttgtt---ttctag---gcac-t--gt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8353 28 -    135385 t---att--------g---atc-tc--tt-a---tt------tatcaa---acac-t--gt
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388075 31 +   7955117 t---gtt--------a---atc-tc--ct-a---tt---attcgccag---gcac-t--gt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3631 23 +     11955 -----------------------Tc--tt-g---ccatt---tgccag---gcac-t--gt
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11271 19 -     16823 ------------------------------a-t-ta-tt---tgctag---gaca-t--gt
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 10 C 0
s Jaculus_jaculus.JH725527.1                               1241260 29 +   9596543 t---ttt--------g---atc-tg--ataa---tt------tgctag---gcac-t--gt
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73111 19 -     97402 ------------------------------a-t-ta-tt---tgctag---aacg-t--gt
i Kogia_breviceps.KogBre_flattened_line_3970             I 10 C 0
s Lagothrix_lagothricha.k141_246028                          44484 29 +    110728 t---gct--------g-----a-tc--tt-a---ctgtt---tgctag---gcac-t--gt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64414 31 -     65777 a---att--------t---atc-tc--tt-a-t-ta-tt---tgttag---aaag-t--gt
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760731 31 +  30322482 t---ggt--------g---ccc-tc--tt-g---ccatt---tgccag---gcac-t--gt
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5391 29 -     13097 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5145 29 +      5940 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4968 29 -      5717 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11354 29 -     11567 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12735 29 -     12945 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10247 31 +     29618 t---gtt--------g---ctc-tc--tt-g---ccatt---tgctaa---gcac-t--gt
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10243 31 +     31569 t---gtt--------g---ctc-tc--tt-g---ccatt---tgctaa---gcac-t--gt
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10253 31 +     24756 t---gtt--------g---ctc-tt--tt-g---ccatt---tgctaa---gcac-t--gt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10253 31 +     16388 t---gtt--------g---ctc-tc--tt-g---ccatt---tgctaa---gcac-t--gt
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814729 31 -   3914936 t---gct--------t---atc-tc--tt-a-t-ta-tt---tgtaag---tatt-t--gt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342456 19 +    662738 ------------------------------a-t-ta-tt---tgctag---gatg-t--gt
i Lipotes_vexillifer.KE559953.1                          I 10 C 0
s Lophocebus_aterrimus.ctg367                               335388 29 -   1826925 t---gct--------g-----a-tc--gt-a---ttgtt---tgctag---gcac-t--gt
i Lophocebus_aterrimus.ctg367                            I 59 C 0
s Loris_lydekkerianus.k141_2031736                           12543 30 +     19643 t---g-t--------g---atc-tc--tt-a---ccatt---agccag---gcac-t--gt
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046213 30 -   6120653 t---g-t--------g---atc-tc--tt-a---ccatt---agccag---gcac-t--gt
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086144 17 +  43346337 ----------------------------------tg-tt---tgccag---gcac-t--gt
i Loxodonta_africana.GL010049.1                          I 11 C 0
s Lycaon_pictus.CM007581.1                                41615777 19 +  59628241 ------------------------------a-t-ta-tt---tgtgag---gaat-t--gt
i Lycaon_pictus.CM007581.1                               I 10 C 0
s Macaca_arctoides.k141_1757516                              46777 29 -     61512 t---gct--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Macaca_arctoides.k141_1757516                          I 59 C 0
s Macaca_assamensis.Contig5                                 374439 29 -  60120075 t---gct--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Macaca_assamensis.Contig5                              I 59 C 0
s Macaca_cyclopis.k119_263443                                26707 29 +     30207 t---gct--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Macaca_cyclopis.k119_263443                            I 59 C 0
s Macaca_fascicularis.k141_1617581                            1545 29 -      5035 t---gct--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Macaca_fascicularis.k141_1617581                       I 59 C 0
s Macaca_fuscata.k119_546792                                 26660 29 +     30527 t---gct--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Macaca_fuscata.k119_546792                             I 59 C 0
s Macaca_leonina.k141_321385                                 37836 29 -     50087 t---gcc--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Macaca_leonina.k141_321385                             I 59 C 0
s Macaca_maura.k141_1103459                                  47580 29 +     51645 t---gcc--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Macaca_maura.k141_1103459                              I 59 C 0
s Macaca_mulatta.NC_041758.1                                416783 29 - 187317192 t---gcT--------G-----A-TC--AT-A---TTGtt---tgctag---gcac-t--gt
i Macaca_mulatta.NC_041758.1                             I 59 C 0
s Macaca_nemestrina.KQ007038.1                              401013 29 +  25927173 t---gcC--------G-----A-TC--AT-A---TTGtt---tgctag---gcac-t--gt
i Macaca_nemestrina.KQ007038.1                           I 59 C 0
s Macaca_nigra.k141_2818840                                  50185 29 -     62418 t---gcc--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Macaca_nigra.k141_2818840                              I 59 C 0
s Macaca_radiata.k141_2139468                                 2716 29 +     14901 t---gct--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Macaca_radiata.k141_2139468                            I 59 C 0
s Macaca_siberu.k141_2185972                                 46657 29 +     59329 t---gcc--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Macaca_siberu.k141_2185972                             I 59 C 0
s Macaca_silenus.Contig273                                  272565 29 +    668171 t---gcc--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Macaca_silenus.Contig273                               I 59 C 0
s Macaca_thibetana.k99_45532                                  1203 29 -      5049 t---gct--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Macaca_thibetana.k99_45532                             I 59 C 0
s Macaca_tonkeana.k141_339739                                 4363 29 +     17132 t---gcc--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Macaca_tonkeana.k141_339739                            I 59 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224477 31 -    270270 a---gtt--------t---att-tc--tt-a-t-tg-tt---tattgg---aaac-t--at
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323853 29 +  24302211 t---gct--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Mandrillus_leucophaeus.scaffold280                     I 59 C 0
s Mandrillus_sphinx.Contig270                               358684 29 -    752769 t---gct--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Mandrillus_sphinx.Contig270                            I 59 C 0
s Manis_javanica.JSZB01003497.1                             674776 31 -    737560 t---ctt--------t---atc-cc--tt-ac--ta-tt---tgctag---gatt-t--gt
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222076 31 +    317179 t---ctt--------t---atc-cc--tt-ac--ta-tt---tgctag---gatt-t--gt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502289 31 +  40650429 t---gtt--------g---atc-tc--tt-a---tt---attcgccag---gcac-t--gt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151648 29 +    207569 A---GTA--------T---ATC-Tc--tt-a-t-t---t---tggggg---gaaa-t--gt
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27457 31 -     74585 t---gct--------t---ctc-tc--tt-ac--ta-tt---tgtgag---aaat-t--gt
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52042 27 -    140813 t---ttt--------g---atc-tc---t-a---tt------tgtcag---gcac-c--at
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88740 19 +     93471 ------------------------------a-t-ta-tt---tgctag---gacg-t--at
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 10 C 0
s Mico_argentatus.k141_582562                                11513 29 +     17804 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---ggac-t--gt
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12013 29 -     12984 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---ggac-t--gt
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20332 29 -     26561 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---ggac-t--gt
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986085 31 +  93316391 T---GTT--------G--C-TC-TC--TT-G---ctgtt---tgccag---gcac-t--gt
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47938 17 +    145209 ----------------------------------tg-ct---tgccag---gcac-c--aa
i Microgale_talazaci.MicTal_scaffold_6613                I 11 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186316 28 +    200668 a---gtt--------t---atc-tc--tt-a-t-----t---tgttaa---gaag-t--at
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965083 14 +  27267610 -----------------------------------t------tgtcag---gcac-c--at
i Microtus_ochrogaster.CM001695.1                        I 11 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364470 31 -   8254450 a---gtt--------t---ttc-tc--tt-a--ata-tt---tgttag---gaag-t--at
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43383 31 -     48117 a---gtt--------t---atc-tc--tt-a--ata-tt---tgttag---gaag-t--at
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23953 29 -     27822 t---gct--------g-----a-tc--gt-a---ttgtt---tgctag---gcac-t--gt
i Miopithecus_ogouensis.k141_1534655                     I 59 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9740 31 +     27589 T---GCT--------T---ATC-TC--TT-A--TTA-TT---TGTAAG---TATT-T--GT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53861 31 -     62432 t---gtt--------g---ctc-tc--tt-g---ctgtt---tgccag---gcac-t--gt
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360845 19 +    437263 ------------------------------A--TTA-TT---TGCTAG---GACA-T--GT
i Monodon_monoceros.MonMon_M_scaffold_103                I 10 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180557 32 +    366855 A---GTT--T-----T-G--TC-Tc--tt-t-t-ta-tt---tgttag---aaag-t--at
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27176 30 -     82753 t---gtt--------t---acc-ta--tt-ac--ta-tt---tgctag---gaac-t--g-
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19760 31 -     63510 t---gct--------t---agc-tc--tg-a-t-ta-tt---tttgag---gaac-t--gg
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          40400 31 +     47283 A---ATT--------T-G--TC-TC--TT-A--TTA-TT---TGTTAG---GAAG-C--GT
i Murina_feae.MurFea_scaffold_17764                      C 0 I 2018
s Mus_caroli.LT608237.1                                   35596245 29 + 120012414 T---GTT--------G---AAC-TCT-TT-A---TT------TGACAG---GCAT-C--AT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689442 29 + 129401213 c---gtt--------g---aac-tc-ttt-a---tt------tgacag---gcat-c--at
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217784 29 +  89631738 t---gtt--------g---aac-tc-ttt-a---tt------tgacag---gcat-c--at
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498727 29 + 130317789 c---att--------g---aac-tc-ttt-a---tt------tgacag---gcat-c--at
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85441 31 -     86153 t---gtt--------g---gtt-tc--tc-a---gt---attttccag---gcac-t--gt
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356363 31 +  14710649 T---GCT--------T--C-TC-TC--TT-A--CTA-TT---TTTGAG---AAAT-T--GT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64332 15 +     67721 ----------------------------------tt------aaccaa---gcac-t--gt
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 13 C 0
s Myotis_brandtii.KE162005.1                               9794680 31 +  10118263 a---att--------t---acc-tc--tt-a-t-ta-tt---tgttag---gaag-t--at
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388864 22 +   6019432 ------------------------c--tt-a-t-ta-tt---tgttag---gaag-t--at
i Myotis_davidii.KB100139.1                              I 7 C 0
s Myotis_lucifugus.GL429869.1                               384883 31 +   4330536 a---att--------t---atc-tc--tt-a-t-ta-tt---tgttag---gaag-t--gt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3668 31 +     18357 a---att--------t---atc-tc--tt-a-t-ta-tt---tgttag---gaag-t--at
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121029 17 +    130748 ----------------------------------cg-tt---tgccag---gaac-t--gt
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 14 C 0
s Nannospalax_galili.KL204047.1                             947943 28 +   3037898 C---ATT--------G---ATC-TC--AT-A---TT------TGTCAG---GCAC-A--AT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30675 29 +     34575 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Nasalis_larvatus.k141_1350636                          I 53 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233511 19 -   7148211 ------------------------------a-t-ta-tt---tgctag---gaca-t--gt
i Neophocaena_asiaeorientalis.KZ687982.1                 I 10 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129164 31 -    149072 a---gtt--------t---acc-tc--tt-a-t-ta-ta---tcttag---gaaa-t--gg
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54966 29 -    132029 t---gct--------g-----a-tc--tt-a---ttgtt---ttctag---gcac-t--gt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11061 29 -     16345 t---gct--------g-----a-tc--tt-a---ttgtt---ttctag---gcac-t--gt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16946 29 +     22201 t---gct--------g-----a-tc--tt-a---ttgtt---ttctag---gcac-t--gt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415167 29 -  22158432 t---gct--------g-----a-tc--tt-a---ttgtt---ttctag---gcac-t--gt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27344 29 -     54323 t---gct--------g-----a-tc--tt-a---ttgtt---ttctag---gcac-t--gt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199376 16 +   9404916 -----------------------------------a-tt---tgtgag---gaat-t--gt
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 10 C 0
s Nycticebus_bengalensis.LG01                             93639436 30 + 196305487 t---g-t--------g---atc-tc--tt-a---ccatt---tgccag---gcac-t--gt
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             2039 30 -      9413 t---g-t--------g---atc-tc--tt-a---ccatt---tgccag---gcac-t--gt
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566819 30 - 199412804 t---g-t--------g---atc-tc--tt-a---ccatt---tgccag---gcac-t--gt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558134 29 -   3988456 T---GTT--------G---ATC-TC--TT-A---TT--T---TTCCAG---ATAC-C--AA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056409 12 -  11899542 t---act--------g---atc-tc--tt--------------------------------
i Octodon_degus.JH651603.1                               C 0 I 16
s Odobenus_rosmarus.KB229312.1                             1453158 31 +   2017862 t---gct--------t---atc-tc--tt-a-t-ta-tt---tgtgag---taat-t--gt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437956 30 -    630418 T---GTT--------T---ACC-TA--TT-A--CTA-TT---TGCTAG---GAAC-T--G-
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16147 30 +    150152 t---gtt--------t---acc-ta--tt-ac--ta-tt---tgctag---gaac-t--g-
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95756 14 -    140218 -----------------------------------t------tgacag---gcac-c--at
i Ondatra_zibethicus.OndZib_scaffold_7387                I 11 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6302 14 -     41509 -----------------------------------t------tgacag---acac-c--at
i Onychomys_torridus.OnyTor_scaffold_28377               I 11 C 0
s Orcinus_orca.KB316932.1                                  8103913 20 +  10937097 ------------------------------a-t-ta-tt---tgctag---gacaac--gt
i Orcinus_orca.KB316932.1                                I 10 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1210 17 +     11607 ----------------------------------tg-gt---tgccag---gaac-t--gt
i Orycteropus_afer.OryAfe_flattened_line_201229          I 11 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40419 19 +    559221 ------------------------------a-t-ta-tt---tgtgag---gaat-t--gt
i Otocyon_megalotis.JAEUCK010005147.1                    I 10 C 0
s Otolemur_crassicaudatus.k141_649260                        41990 30 -     51505 t---g-t--------g---atc-tc--tt-a---ccatc---tgccag---gcac-t--gt
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             354995 30 +   1103335 T---G-T--------G--C-TC-TC--TT-A---ccatt---tgccag---gcac-t--gt
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405858 30 -  44047080 t---gtt--------t---acc-ta--tt-ac--ta-tt---cgctag---gaac-t--g-
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6377 30 +     17875 t---gtt--------t---acc-ta--tt-ac--ta-tt---cgctag---gaac-t--g-
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1474063 29 - 189151597 T---GCT--------G-----A-TC--TT-A---TTGTT---ttctag---gcac-t--gt
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25759 31 -    230217 t---gct--------t---agc-tc--tg-a-t-aa-tt---tttgag---gact-t--gt
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463085 31 -  18783137 t---gct--------t---agc-tc--tg-a-t-aa-tt---tttgag---gact-t--gt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973744 31 +   8748460 t---gct--------t---agc-tc--tg-a-t-aa-tt---tttgag---gact-t--gt
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617383 30 +   2937107 t---gtt--------t---acc-ta--tt-ac--tt-tt---tgctag---gaac-t--g-
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244862 29 - 183742232 t---gcT--------G-----A-TC--GT-A---TTGtt---tgctag---gcac-t--gt
i Papio_anubis.CM001495.2                                I 59 C 0
s Papio_cynocephalus.k141_1507553                            11147 29 +     21308 t---gct--------g-----a-tc--gt-a---ttgtt---tgctag---gcac-t--gt
i Papio_cynocephalus.k141_1507553                        I 59 C 0
s Papio_hamadryas.Contig39                                  293890 29 -  20919399 t---gct--------g-----a-tc--gt-a---ttgtt---tgctag---gcac-t--gt
i Papio_hamadryas.Contig39                               I 59 C 0
s Papio_kindae.k141_2214839                                  23795 29 -     27687 t---gct--------g-----a-tc--at-a---ttgtt---tgctag---gcac-t--gt
i Papio_kindae.k141_2214839                              I 59 C 0
s Papio_papio.k141_3538738                                     466 29 +     10553 t---gct--------g-----a-tc--gt-a---ttgtt---tgctag---gcac-t--gt
i Papio_papio.k141_3538738                               I 59 C 0
s Papio_ursinus.k141_5784434                                   426 29 -     10386 t---gct--------g-----a-tc--gt-a---ttgtt---tgctag---gcac-t--gt
i Papio_ursinus.k141_5784434                             I 59 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16341 30 +     78924 t---gct--------t---agc-tc--tg-a-t-ta-tt---ttt-ag---gaat-t--gg
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28322 30 +     31479 t---g-t--------g---atc-tc--tt-a---tcatt---tgccag---gcac-t--gt
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20690 30 -     24908 t---g-t--------g---atc-tc--tt-a---tcatt---tgccag---gcac-t--gt
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3145 28 +      9367 T---GCC--------A---ATC-TC--ct-a---tg------caccag---gcac-t--gt
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249525 14 +  18517816 -----------------------------------T------CAACAG---GCAC-C--AT
i Peromyscus_maniculatus.KI615324.1                      I 11 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33199 15 -     56120 ----------------------------------gt------tgtcaa---gcac-g--gt
i Petromus_typicus.PetTyp_scaffold_17301                 I 13 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5439 19 -     63832 ------------------------------a-t-ta-tt---tgctag---gaca-t--gt
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 10 C 0
s Piliocolobus_badius.k141_2704958                            4112 29 +     55023 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Piliocolobus_badius.k141_2704958                       I 127 C 0
s Piliocolobus_gordonorum.k141_381342                         3582 29 -     89929 t---gct--------g-----a-tt--gt-a---tggtt---tgctag---gcac-t--gt
i Piliocolobus_gordonorum.k141_381342                    I 85 C 0
s Piliocolobus_kirkii.k141_1310104                            4172 29 +     40849 t---gct--------g-----a-tt--gt-a---tggtt---tgctag---gcac-t--gt
i Piliocolobus_kirkii.k141_1310104                       I 85 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255847 29 +  14605196 t---gct--------G-----A-TT--GT-A---TGGtt---tgctag---gcac-t--gt
i Piliocolobus_tephrosceles.PDMG02000141.1               I 85 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5251 31 +     22231 a---att--------t---atc-tc--tt-g-t-ta-tt---tgttag---gaag-t--gt
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66026 29 +    207309 t---gct--------g-----c-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7114 29 -     25401 t---gct--------g-----c-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32862 29 +     58159 t---gct--------g-----c-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33138 29 +     63561 t---gct--------g-----c-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32898 29 +     51148 t---gct--------g-----c-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557868 29 -   4542175 t---gct--------g-----c-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32882 29 +     51125 t---gct--------g-----c-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2456 19 +     19503 ------------------------------A--TTA-TT---TGCTAG---GACG-T--GT
i Platanista_gangetica.PlaMin_flattened_line_83166       I 10 C 0
s Plecturocebus_bernhardi.k141_2549090                        9300 29 +     39866 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4382 29 -      9282 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43786 29 -     87950 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44180 29 -     88961 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8878 29 -     39403 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43829 29 +     87928 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8877 29 -     60166 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15814 29 -     67232 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43730 29 -     90634 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45197 29 +     89403 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179176 29 - 189387572 T---GCT--------G-----A-TC--TT-A---TTGTT---ttctag---gcac-t--gt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      193993 29 -   9816681 t---gct--------g-----a-tc--tt-a---ttgtt---ttctag---gcac-t--gt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_980496                                 975 29 -      1047 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Presbytis_comata.k141_980496                           n 186 C 0
s Presbytis_mitrata.k141_584736                              46438 29 -     80239 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Presbytis_mitrata.k141_584736                          I 124 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5471 17 +      7663 ----------------------------------tg-tt---gaccgg---gcac-t--gt
i Procavia_capensis.ProCapCap_scaffold_165387            I 11 C 0
s Prolemur_simus.MPIZ01000396.1                            1983879 31 +   4620579 T---GGT--------G--C-CC-TC--TT-G---ccatt---tgccag---gcac-t--gt
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567382 23 -   2598838 -----------------------TC--TT-G---ccatt---tgccag---gcac-t--gt
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5020 23 -      7103 -----------------------Tc--tt-g---ccatt---tgccag---gcac-t--gt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5617 23 -     11706 -----------------------Tc--tt-g---ccatt---tgccag---gcac-g--gt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9354 23 -     30655 -----------------------Tc--tt-g---ccatt---tgccag---gcac-t--gt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35668 23 +     46564 -----------------------Tc--tt-g---ccatt---tgccaa---gcac-t--gt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95947 23 -     98465 -----------------------Tc--tt-g---ccatt---tgccag---gcac-t--gt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9586 23 +     35169 -----------------------Tc--tt-g---ccatt---tgccag---gcac-t--gt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39565 29 +     52041 t---ttt--------g---atc-tc-ttt-a---tt------tgtcag---gcac-t--at
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53448 34 -     66298 a---gtt--------t---atc-tc--tt-a-t-ta-tt---tgttaggaggaag-t--at
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5935 31 -     18639 T---GCT--------T--C-TC-Tc--tt-ac--ta-tt---tgtgag---aaat-t--gt
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842048 31 -  28871421 a---gtt--------t---atc-tc--tt-a-t-tg-tt---tgttag---aaac-t--at
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538563 31 -   4952924 a---gtt--------t---atc-tc--tt-a-t-tg-tt---tgttag---aaac-t--at
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100399 31 +  38429054 t---gct--------t---agc-tc--tg-a-t-aa-tt---tttgag---gact-t--gt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28624 29 +     91421 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Pygathrix_cinerea.k141_1153803                         I 56 C 0
s Pygathrix_nigripes_b.ctg100                                  155176 29 -   7812017 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Pygathrix_nigripes_b.ctg100                               I 56 C 0
s Pygathrix_nigripes_a.k141_215492                              9481 29 +     72585 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Pygathrix_nigripes_a.k141_215492                         I 56 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                     1 30 -     55207 T---GTT--------T---ACC-TA--TT-A--CTA-TC---TGCTAG---GAAC-T--G-
i Rangifer_tarandus.RanTarSib_scaffold_29737             N 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916017 28 +   3329780 a---gtt--------t---atc-tc--tt-a-t-t-------tgttag---gaat-t--gt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3143 29 +      7119 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Rhinopithecus_bieti.k119_778604                        I 56 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123758 29 + 195417433 t---gcT--------G-----A-TT--GT-A---TTGtt---tgctag---gcac-t--gt
i Rhinopithecus_roxellana.NC_044550.1                    I 56 C 0
s Rhinopithecus_strykeri.ctg102                             237985 29 -   7961872 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Rhinopithecus_strykeri.ctg102                          I 56 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76548 31 -    116970 a---gtt--------t---atc-tc--tt-a-t-cg-tt---cgttag---aaac-t--at
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                255 29 -      1130 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5157 29 +      6077 t---gct--------g-----g-tc--tt-a---ttgtt---tgctgg---gcac-t--gt
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5251 29 +      5971 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5168 29 +      5932 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3513 29 -      4390 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393270 29 - 209938924 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5116 29 +      5979 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1686 29 -     22275 t---gct--------g-----g-tc--tt-a---ttgtt---tgctgg---gcac-t--gt
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9546 30 +     16473 t---gtt--------t---acc-tg--tt-ac--ta-tt---tgctag---gaac-t--g-
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110279 29 + 121099817 T---GCT--------G-----G-TC--TT-A---TTGtt---tgctag---gcac-t--gt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31846 29 -     47369 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gcac-t--gt
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32232 29 -     79414 t---gct--------g-----g-tc--tc-a---ttgtt---tgctag---gcac-t--gt
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28923 29 -     34454 t---gct--------g-----g-tc--tc-a---ttgtt---tgctag---gcac-t--gt
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16324 29 -     22428 t---gct--------g-----g-tc--tc-a---ttgtt---tgctag---gcac-t--gt
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31478 29 -     47109 t---gct--------g-----g-tc--tt-a---ctgtt---tgctag---gcac-t--gt
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239530 29 +   5703754 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gctc-t--gt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9120 29 +     21866 t---gct--------g-----g-tc--tt-a---ttgtt---tgctag---gctc-t--gt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30459 29 +     58920 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Semnopithecus_hypoleucos.k141_1910531                  I 150 C 0
s Semnopithecus_johnii.k141_843753                           16957 29 -     45317 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Semnopithecus_johnii.k141_843753                       I 56 C 0
s Semnopithecus_priam.k141_714795                            24615 29 -     42441 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Semnopithecus_priam.k141_714795                        I 56 C 0
s Semnopithecus_schistaceus.k141_1432920                     27293 29 -     29113 T---GCT--------G-----A-TT--GT-A---TTGTT---TGCTAG---GCAC-T--GT
i Semnopithecus_schistaceus.k141_1432920                 I 56 C 0
s Semnopithecus_vetulus.k141_244474                          30368 29 -     48123 t---gct--------g-----a-tt--gt-a---ttatt---tgctag---gcac-t--gt
i Semnopithecus_vetulus.k141_244474                      I 56 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51314 14 +     77746 -----------------------------------t------tgagag---gcac-c--at
i Sigmodon_hispidus.SigHis_scaffold_20193                I 3 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865419 28 -   1910179 ------t--------t---atc-tg--tt-a--gta-tt---tgctag---gaat-t--ac
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672524 12 +  18376816 ------------------------------------------CACTGA---GAAT-T--G-
i Sorex_araneus.JH798187.1                               I 9 C 0
s Spermophilus_dauricus.KZ294078.1                         1869653 31 +   3870691 t---gtt--------g---atc-tc--tt-a---tt---attcgccag---gcac-t--gt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8010 31 -     97271 t---gtt--------t---atc-tc--tt-a-t-ta-tt---tgtgag---gaat-t--gt
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126177 31 +    196729 t---gct--------c---aac-tc--tg-a-t-ta-tt---tttgag---gaat-t--ag
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645217 29 +  69701581 -----tt--------t---atc-tt--tt-a-t-ta-tt---tggtag---aaac-t--gt
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392432 29 +   1523678 t---gct--------g-----a-tc--tt-a---ttgtt---ttctag---gcac-t--gt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15594 28 +     22964 ------t--------a---atc-tc--tt-a-t-ta-tt---tgttag---gaag-g--gt
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4021 17 +      5583 ----------------------------------tg-tt---tgccag---gaac-t--gt
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 14 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192901 31 +    199430 t---gtt--------t---atc-tt--tt-a-t-ta-tt---tactag---gaac-t--gt
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106869 31 -    539355 t---gtt--------t---atc-tt--tt-a-t-ta-tt---tactag---gaac-t--gt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1943 31 +      9917 t---gtt--------g---ttc-tc--tc-a---ctgat---tgccag---gtac-t--gt
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8741 31 +     20590 t---gtt--------g---ttc-tc--tc-a---ctgat---tgccag---gtac-t--gt
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354671 29 - 186847797 t---gcT--------G-----A-TC--GT-A---Ttgta---tgctag---gcac-t--gt
i Theropithecus_gelada.CM009954.1                        I 59 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25352 15 -     33621 ----------------------------------tt------tgtcaa---gcac-t--gt
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 13 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20977 17 -     31044 ----------------------------------tg-tc---tgctag---gcaa-g--gt
i Tolypeutes_matacus.TolMat_scaffold_31955               I 13 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481446 28 -    610378 a---gtt--------c---atc-tc--tt-a-t-----t---tgttaa---gaag-t--gt
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22424 29 +     26378 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Trachypithecus_auratus.k141_1189070                    I 56 C 0
s Trachypithecus_crepusculus.k141_539312                     35168 29 -     78344 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Trachypithecus_crepusculus.k141_539312                 I 56 C 0
s Trachypithecus_cristatus.k141_180416                       21749 29 +     25722 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Trachypithecus_cristatus.k141_180416                   I 56 C 0
s Trachypithecus_francoisi.k141_1453105                      30124 29 -     62838 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Trachypithecus_francoisi.k141_1453105                  I 56 C 0
s Trachypithecus_geei.k141_1001272                           30168 29 +     46913 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Trachypithecus_geei.k141_1001272                       I 56 C 0
s Trachypithecus_germaini.k141_57262                         10907 29 -     28527 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Trachypithecus_germaini.k141_57262                     I 56 C 0
s Trachypithecus_hatinhensis.k141_31479                      32059 29 -     64340 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Trachypithecus_hatinhensis.k141_31479                  I 56 C 0
s Trachypithecus_laotum.k141_928651                          30097 29 -     63452 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Trachypithecus_laotum.k141_928651                      I 56 C 0
s Trachypithecus_leucocephalus.k141_96450                    11544 29 +     22490 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Trachypithecus_leucocephalus.k141_96450                I 56 C 0
s Trachypithecus_melamera.k141_591572                         4967 29 -      6147 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Trachypithecus_melamera.k141_591572                    I 56 C 0
s Trachypithecus_obscurus.k141_848057                        11880 29 -     13050 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Trachypithecus_obscurus.k141_848057                    I 56 C 0
s Trachypithecus_phayrei.ctg124                             257042 29 -   6242583 t---gct--------g-----a-tt--gt-a---ttgtg---tgctag---gcac-t--gt
i Trachypithecus_phayrei.ctg124                          I 56 C 0
s Trachypithecus_pileatus.k141_2622778                        3138 29 +     19340 t---gct--------g-----a-tt--gt-a---ttgtt---tgctag---gcac-t--gt
i Trachypithecus_pileatus.k141_2622778                   I 56 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175157 31 -    200418 t---gtt--------t---agc-tc--tt-ac--ta-tg---tactag---gaac-t--gt
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482839 17 -  10818551 ----------------------------------tg-tt---tgccag---gcac-t--gt
i Trichechus_manatus.JH594705.1                          I 11 C 0
s Tupaia_chinensis.KB320699.1                              1836371 31 -   4065304 t---gta--------g--aatc-tc--tt-a---ct-tt---tgccag---gcac-g--gt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10407 30 -     70247 t---gtt--------g---atc-tc--tt-a---tt-tt---tgccag---gcat-g--gt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367038 20 -  33153633 ------------------------------a-t-ta-tt---tgctag---gacaac--gt
i Tursiops_truncatus.MRVK01000835.1                      I 10 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4816 29 -     21056 ------T--------GTGCATA-TT--CT-A--TTA-T-----GCTAG---GATT-T--GT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183378 31 +   5085361 t---tct--------t---atc-tc--tt-a-t-ta-tt---tgtgag---gaat-t--gt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26532 31 -     30710 t---ggt--------g---ccc-tc--tt-g---ccgtt---tgccag---gcac-t--gt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25439 31 -    147434 t---ggt--------g---ccc-tc--tt-g---ccgtt---tgccag---gcac-t--gt
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77581 17 +   5488506 -----------------------TCTCTT-A--TTA-TT---TGCTA--------------
i Vicugna_pacos.KN270157.1                               I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106142 19 -    112863 ------------------------------a-t-ta-tt---tgtgag---gaat-t--gt
i Vulpes_lagopus.VulLag_flattened_line_12041             I 10 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175409 31 -    224448 t---gtt--------g---atc-tc--tt-a---tt---atttgccag---gcac-t--gt
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30370 31 -     86975 t---gct--------t---atc-tc--tt-a-t-ta-tt---tgtgag---taat-t--gt
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1220 18 -      1899 T---GTT--------T---ATC-TG--GTTG---TT------TG-----------------
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 I 1
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Semnopithecus_entellus.k141_158471                         26797 65 +     27374 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955  0 +    313613 C
e Rattus_norvegicus.chr16                                 37024043 457 -  90668790 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Condylura_cristata.JH655891.1                           35808250  0 +  53390261 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6748 5 +     36723 GCTG-A
s Acinonyx_jubatus.LLWD01001279.1                           814171 5 +   1699592 acta-a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27429 5 +     63021 GCTA-A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416632 5 +  29979442 atga-a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19808 5 -     61208 tctg-a
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49452 5 +     53615 gctg-a
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1483 5 +     13857 gctg-a
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18034 5 -     21945 gctg-a
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19719 5 +     32033 gctg-a
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73497 5 -     84148 gctg-a
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45736 5 -     78289 gctg-a
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45175 5 +     55831 gctg-a
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43625 5 -     64179 gctg-a
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            732 5 -      3959 gctg-a
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42250 5 +     45454 gctg-a
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47899 5 +     70886 gctg-a
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10072 5 +     30854 gctg-a
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34206 5 +     42133 gctg-a
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587021 4 +   2318259 -tta-a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178437 5 -    412891 gctg-a
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52098 4 -     68529 -tta-a
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2464 5 +     17741 gctg-a
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3089 5 -     15923 gctg-a
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673371 5 +   5030052 gctg-a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3365 5 -     16391 gctg-a
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2924 5 -     17186 gctg-a
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17438 5 -     32367 gcta-a
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21497 5 -     45910 gcta-a
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6695 5 -     15198 gcta-a
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275962 5 +  21539123 gctg-a
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12129 5 +     48076 gctg-a
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7264 5 -     28759 gctg-a
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34819 5 +     44353 gctg-a
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50189 5 -     71267 gctg-a
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24247 5 -     33135 gctg-a
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7511 5 +     11645 gctg-g
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7519 5 -     19611 gctg-g
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964781 5 -  23207421 gcca-a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1281 5 -     25979 gcca-a
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88027 4 +    124022 -tta-a
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23558 4 +    288883 -tta-a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357948 4 +  48749331 -tta-a
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756512 4 +   1948126 -tta-a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546654 4 -  45695690 -tta-a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531662 4 -   4408762 -tta-a
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9056 5 +     28062 gctg-a
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44350 5 -     91139 gctg-a
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21876 5 +     95584 gctg-a
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21789 5 +    119600 gctg-a
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11444 5 +     18648 gctg-a
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10960 5 -     13885 gctg-a
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3046 5 -      8861 gctg-a
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455438 5 + 189096842 GCTG-A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2961 5 +      8664 gctg-a
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s CanFam4.chr16                                           42506527 5 +  60362399 ggga-a
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10163 5 -     23171 ggga-a
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223506 5 +   9314153 ggga-a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616641 5 +  59632846 ggga-a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108222 5 -  63665305 ggga-a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410750 4 -  46296322 -tta-a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26593024 4 +  44709034 -tta-a
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    759 4 -      1607 GCT--A
i Capromys_pilorides.CapPil_scaffold_762519              I 16 C 0
s Carlito_syrichta.NW_007259797.1                           271748 5 +    496798 GGTA-A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1565 5 +      9923 gcca-a
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28927 5 -     39886 gcta-a
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80849 5 -    217609 gcta-a
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997656 4 +  23392119 gct--g
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001098 4 +  23407841 gct--g
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64177 4 -     66877 gct--g
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6359 5 -     12580 gctg-a
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44417 5 +     53515 gctg-a
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374185 5 -  26074798 gctg-a
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9239 5 -     34880 gctg-a
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68335 5 -     89041 gctg-a
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3709 5 -      5494 ggta-a
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493468 5 -  27778364 gcta-a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20301 5 +     27315 gcta-a
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142532 5 -   4669795 gctg-a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46271 5 +     47900 gctg-a
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1704 5 -     14410 gctg-a
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46088 5 -    148725 gctg-a
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28366 5 -     40656 gctg-a
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8330 5 +     20796 gctg-a
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13439 5 -     17524 gctg-a
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29171 5 -     34525 gctg-a
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12951 5 -     25376 gctg-a
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365538 5 -  39242232 gctg-a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271265 5 +  21565898 gctg-a
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33630 5 -     45857 gctg-a
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28534 5 -     32606 gctg-a
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4696 5 +      8499 gctg-a
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27092 5 +     70610 gctg-a
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24053 5 +     36323 gctg-a
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13898 5 -     19938 gcta-a
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31906 6 -     33796 gctaag
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6420 6 -     15404 gctaag
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10164 5 -     32913 gctg-a
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20577 5 -     40346 gctg-a
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20832 5 +    216457 gctg-a
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20621 5 +     39636 gctg-a
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239989 4 -   2543920 gct--a
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            284 5 +      1057 gctg-a
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43687 5 -    112038 gctg-a
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9238 5 +     34062 gctg-a
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344954 5 +  18827391 gctg-a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11493 5 -     44032 gctg-a
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306345 5 - 135778131 gctg-a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  161 5 +     10270 gcta-a
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607637 5 -    839153 gcta-a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_4313612                65 5 +       302 gcta-a
i Chrysochloris_asiatica.ChrAsi_scaffold_4313612         C 0 C 0
s Colobus_angolensis.KN981557.1                             410753 5 -   2368649 gctg-a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380634 5 - 200372422 gctg-a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4191 5 -     84244 gctg-a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4052 5 -      8242 gcta-a
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46107 5 -     83289 gcta-a
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117797 5 - 224834208 gcta-a
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              11032 5 +     12657 TGCC-A
i Crocidura_indochinensis.CroInd_scaffold_77846          I 9 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5624 5 +     87169 gcta-a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646663 5 -   1526836 gtca-g
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19830 4 +     50838 GCT--G
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 17 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5567 4 +     36344 gct--a
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29351 4 +     75252 gct--a
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111265 5 -   2246927 gcta-a
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293824 5 +  12879189 gcta-g
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633187 5 -  35494412 gcca-a
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866554 5 -  20541912 gcta-a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665740 5 -   1390856 gcta-a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140540 5 -    198055 gcta-a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100062 4 -    115145 gct--a
i Dinomys_branickii.DinBra_scaffold_10381                I 15 C 0
s Dipodomys_ordii.KN672350.1                              18951831 5 -  37912305 gcta-a
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6765 5 -     10735 GCTA-A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856782 5 - 111700974 GCTA-A
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7526 5 +     19438 gcta-a
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241378 4 -    607251 -tta-a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226988 5 +  10337057 gcta-g
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33648 5 +    110024 gcta-a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15651 5 +     18970 gcta-a
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917369 5 +  41312741 gtga-a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580147 5 +  14770903 gcta-a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042685 5 -   4378816 gcca-a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376623 5 +  39960074 gcca-a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412605 5 -    498745 gcca-a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667408 5 +   7059049 tgtt-a
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264490 5 +  21539334 gctg-a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72395 5 -    133382 gcca-a
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               108 5 +     25849 gcca-a
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16040 5 -     24895 gcta-g
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43750 5 -     70999 gcta-g
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87720 5 +    112731 gcta-g
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44283 5 +     68309 gcta-g
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54607 5 -     65740 gcta-g
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25240 5 -     75513 gcta-g
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49434 5 -     97555 gcta-g
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6158 5 +     30972 gcta-g
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43878 5 -     52037 gcta-g
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60281 5 -    111500 gcta-g
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248081 5 - 206538554 acta-a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117867 5 - 205367284 ACTA-A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28967 5 -     30238 ACTA-A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923209 4 -   3816255 aat--a
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126861 5 -    137831 gcta-a
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10406 5 +     22493 gcta-a
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22489 5 -     32986 gcta-a
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2427 5 -     28519 gcta-a
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 I 5
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93095 4 -     95226 -tta-g
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2568 5 -      6791 gcta-a
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3358147                               7057 5 -      8343 gctg-a
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                256064 5 - 186649187 gctg-a
i Gorilla_gorilla.LT578341.1                             I 29 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3634 5 -     78134 acta-a
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15965 5 -     40692 gcta-g
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37364 5 +     49394 gcta-g
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62235 5 -     66874 gcta-g
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11106 5 -     42923 gcta-g
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18108 5 -     53142 gcta-g
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32057 5 -    327341 gcta-a
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10761 4 +     48891 -tta-a
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933628 4 -  22651954 gct--g
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1497 5 +      8654 gcta-a
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8903 5 -     36432 gcca-g
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552895 5 -   1711038 gcta-a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2332 5 -      2730 gcta-a
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144064 5 -    630532 gctg-a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71430 5 +     83186 gcta-c
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73053 4 +    143317 gct--a
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 3
s Hylobates_agilis.k141_1155965                               7109 5 +     12352 gctg-a
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14293 5 +     55766 gctg-a
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053893 5 + 191637585 gctg-a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802771 5 +  11177569 gctg-a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8381 4 -    135385 gct--a
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388106 5 +   7955117 gcta-a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3654 5 +     11955 gcta-g
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11290 5 -     16823 gcca-a
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241289 5 +   9596543 tctg-a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73130 5 -     97402 gcca-a
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44513 5 +    110728 gctg-a
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64445 5 -     65777 gcta-a
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760762 5 +  30322482 gcta-g
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5420 5 -     13097 gctg-a
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5174 5 +      5940 gctg-a
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        4997 5 -      5717 gctg-a
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11383 5 -     11567 gctg-a
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12764 5 -     12945 gctg-a
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10278 5 +     29618 gcta-g
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10274 5 +     31569 gcta-g
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10284 5 +     24756 gcta-g
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10284 5 +     16388 gcta-g
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814760 5 -   3914936 gtga-a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342475 5 +    662738 gcca-a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335417 5 -   1826925 gctg-a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12573 5 +     19643 gcta-a
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046243 5 -   6120653 gcta-a
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086161 5 +  43346337 gcta-a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615796 5 +  59628241 ggga-a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46806 5 -     61512 gctg-a
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374468 5 -  60120075 gctg-a
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26736 5 +     30207 gctg-a
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1574 5 -      5035 gctg-a
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26689 5 +     30527 gctg-a
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37865 5 -     50087 gctg-a
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47609 5 +     51645 gctg-a
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416812 5 - 187317192 gctg-a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401042 5 +  25927173 gctg-a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50214 5 -     62418 gctg-a
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2745 5 +     14901 gctg-a
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46686 5 +     59329 gctg-a
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272594 5 +    668171 gctg-a
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1232 5 -      5049 gctg-a
i Macaca_thibetana.k99_45532                             C 0 I 6
s Macaca_tonkeana.k141_339739                                 4392 5 +     17132 gctg-a
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224508 5 -    270270 gcta-a
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323882 5 +  24302211 gctg-a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358713 5 -    752769 gctg-a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674807 5 -    737560 gtta-a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222107 5 +    317179 gtta-a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502320 5 +  40650429 gcta-a
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151677 5 +    207569 gtta-a
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27488 5 -     74585 gtga-a
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52069 5 -    140813 gcca-a
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88759 5 +     93471 gcca-a
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11542 5 +     17804 gctg-a
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12042 5 -     12984 gctg-a
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20361 5 -     26561 gctg-a
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986116 5 +  93316391 gcta-g
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47955 5 +    145209 gcta-a
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186344 5 +    200668 gcta-a
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965097 5 +  27267610 gcta-a
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364501 5 -   8254450 gcta-a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43414 5 -     48117 gcta-a
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23982 5 -     27822 gctg-a
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9771 5 +     27589 GTGA-A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53892 5 -     62432 gcta-g
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360864 5 +    437263 GCCA-A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180589 5 +    366855 gcta-a
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27206 4 -     82753 -tta-a
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19791 5 -     63510 gcta-a
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42449 5 +     47283 gcta-a
i Murina_feae.MurFea_scaffold_17764                      I 2018 C 0
s Mus_caroli.LT608237.1                                   35596274 5 + 120012414 GCTA-A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689471 5 + 129401213 gcta-a
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217813 5 +  89631738 gcta-a
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498756 5 + 130317789 gcta-a
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85472 5 -     86153 gcta-a
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356394 5 +  14710649 GTGA-A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64347 4 +     67721 gct--a
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794711 5 +  10118263 gcta-a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388886 5 +   6019432 gcta-a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384914 5 +   4330536 gcta-a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3699 5 +     18357 gcta-a
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121046 5 +    130748 gcta-a
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947971 5 +   3037898 GCTA-A
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30704 5 +     34575 gctg-a
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233530 5 -   7148211 gcca-a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129195 5 -    149072 gcta-a
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           54995 5 -    132029 gctg-a
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11090 5 -     16345 gctg-a
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16975 5 +     22201 gctg-a
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415196 5 -  22158432 gctg-a
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27373 5 -     54323 gctg-a
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199392 5 +   9404916 ggga-a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639466 5 + 196305487 gcta-a
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             2069 5 -      9413 gcta-a
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566849 5 - 199412804 gcta-a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558163 5 -   3988456 GTTA-A
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056437 4 -  11899542 gct--a
i Octodon_degus.JH651603.1                               I 16 C 0
s Odobenus_rosmarus.KB229312.1                             1453189 5 +   2017862 gcga-a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         437986 4 -    630418 -Tta-a
i Odocoileus_virginianus.KZ100018.1                      C 0 I 307
s Okapia_johnstoni.LVCL01S0005463.1                          16177 4 +    150152 -tta-a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95770 5 -    140218 gcta-a
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6316 5 -     41509 gcta-a
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103933 5 +  10937097 gcca-a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1227 5 +     11607 gcta-a
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40438 5 +    559221 ggga-a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        42020 5 -     51505 gcta-a
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             355025 5 +   1103335 gcta-a
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405888 4 -  44047080 -tta-a
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6407 4 +     17875 -tta-a
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1474092 5 - 189151597 gctg-a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25790 5 -    230217 acta-a
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463116 5 -  18783137 acta-a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973775 5 +   8748460 acta-a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617413 4 +   2937107 -tta-a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244891 5 - 183742232 gctg-a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11176 5 +     21308 gctg-a
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293919 5 -  20919399 gctg-a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23824 5 -     27687 gctg-a
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     495 5 +     10553 gctg-a
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   455 5 -     10386 gctg-a
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16371 5 +     78924 gcta-a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28352 5 +     31479 gcta-a
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20720 5 -     24908 gcta-a
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3173 5 +      9367 gcta-a
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249539 5 +  18517816 GCTA-a
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33214 4 -     56120 gct--a
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5458 5 -     63832 gcca-a
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            4141 5 +     55023 gctg-a
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3611 5 -     89929 gctg-a
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4201 5 +     40849 gctg-a
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255876 5 +  14605196 gctg-a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5282 5 +     22231 gcta-a
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66055 5 +    207309 gctg-a
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7143 5 -     25401 gctg-a
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32891 5 +     58159 gctg-a
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33167 5 +     63561 gctg-a
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32927 5 +     51148 gctg-a
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557897 5 -   4542175 gctg-a
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32911 5 +     51125 gctg-a
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2475 5 +     19503 GCCA-A
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9329 5 +     39866 gctg-a
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4411 5 -      9282 gctg-a
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43815 5 -     87950 gctg-a
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44209 5 -     88961 gctg-a
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8907 5 -     39403 gctg-a
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43858 5 +     87928 gctg-a
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8906 5 -     60166 gctg-a
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15843 5 -     67232 gctg-a
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43759 5 -     90634 gctg-a
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45226 5 +     89403 gctg-a
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179205 5 - 189387572 gctg-a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      194022 5 -   9816681 gctg-a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_980496                                1004 5 -      1047 gctg-a
i Presbytis_comata.k141_980496                           C 0 C 0
s Presbytis_mitrata.k141_584736                              46467 5 -     80239 gctg-a
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5488 5 +      7663 gcta-a
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983910 5 +   4620579 gcta-g
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567405 5 -   2598838 gcta-g
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5043 5 -      7103 gcta-g
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5640 5 -     11706 gcta-g
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9377 5 -     30655 gcta-g
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35691 5 +     46564 gcta-g
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95970 5 -     98465 gcta-g
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9609 5 +     35169 gcta-g
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39594 5 +     52041 gcta-a
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53482 5 -     66298 gcta-c
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5966 5 -     18639 gtga-a
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842079 5 -  28871421 gcta-a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538594 5 -   4952924 gcta-a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100430 5 +  38429054 acta-a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28653 5 +     91421 gctg-a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155205 5 -   7812017 gctg-a
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9510 5 +     72585 gctg-a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                    31 4 -     55207 -TTA-A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 307
s Rhinolophus_sinicus.LVEH01000134.1                       2916045 5 +   3329780 gcta-a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3172 5 +      7119 gctg-a
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123787 5 + 195417433 gctg-a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238014 5 -   7961872 gctg-a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76579 5 -    116970 gcta-a
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                284 5 -      1130 gctg-a
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5186 5 +      6077 gctg-a
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5280 5 +      5971 gctg-a
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5197 5 +      5932 gctg-a
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3542 5 -      4390 gctg-a
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393299 5 - 209938924 gctg-a
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5145 5 +      5979 gctg-a
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1715 5 -     22275 gctg-a
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9576 4 +     16473 -tta-a
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110308 5 + 121099817 gctg-a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31875 5 -     47369 gctg-a
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32261 5 -     79414 gctg-a
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28952 5 -     34454 gctg-a
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16353 5 -     22428 gctg-a
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31507 5 -     47109 gctg-a
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239559 5 +   5703754 gctg-a
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9149 5 +     21866 gctg-a
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30488 5 +     58920 gctg-a
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16986 5 -     45317 gctg-a
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24644 5 -     42441 gctg-a
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27322 5 -     29113 GCTG-A
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30397 5 -     48123 gctg-a
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51328 5 +     77746 gcta-a
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865447 5 -   1910179 tctt-a
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672536 5 +  18376816 TATT-A
i Sorex_araneus.JH798187.1                               C 0 I 5
s Spermophilus_dauricus.KZ294078.1                         1869684 5 +   3870691 gcta-a
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8041 5 -     97271 atga-a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126208 5 +    196729 gcta-a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645246 5 +  69701581 gcta-a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392461 5 +   1523678 gctg-a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15622 5 +     22964 gcca-a
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4038 5 +      5583 gcta-a
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192932 5 +    199430 gcta-a
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106900 5 -    539355 gcta-a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1974 5 +      9917 gtta-a
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8772 5 +     20590 gtta-a
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354700 5 - 186847797 gctg-a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25367 4 -     33621 gct--a
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20994 5 -     31044 gcta-a
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481474 5 -    610378 gcta-a
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22453 5 +     26378 gctg-a
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35197 5 -     78344 gctg-a
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21778 5 +     25722 gctg-a
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30153 5 -     62838 gctg-a
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30197 5 +     46913 gctg-a
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10936 5 -     28527 gctg-a
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32088 5 -     64340 gctg-a
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30126 5 -     63452 gctg-a
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11573 5 +     22490 gctg-a
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         4996 5 -      6147 gctg-a
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11909 5 -     13050 gctg-a
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257071 5 -   6242583 gctg-a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3167 5 +     19340 gctg-a
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175188 5 -    200418 gtca-a
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482856 5 -  10818551 gcta-a
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836402 5 -   4065304 gcta-a
i Tupaia_chinensis.KB320699.1                            C 0 I 6
s Tupaia_tana.TupTan_flattened_line_394                      10437 5 -     70247 gcta-a
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 6
s Tursiops_truncatus.MRVK01000835.1                       17367058 5 -  33153633 gcca-a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4845 5 -     21056 ACTG-A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183409 5 +   5085361 atga-a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26563 5 -     30710 gcta-g
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25470 5 -    147434 gcta-g
i Varecia_variegata.k141_289850                          C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106161 5 -    112863 ggga-a
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175440 5 -    224448 gcta-a
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30401 5 -     86975 gcga-a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1239 5 -      1899 TATG-A
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 1 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Ailurus_fulgens.LNAC01001112.1                            216964 0 +    347723 C
e Vicugna_pacos.KN270157.1                                   77598 0 +   5488506 C
e Semnopithecus_entellus.k141_158471                         26797 65 +     27374 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955 0 +    313613 C
e Rattus_norvegicus.chr16                                 37024043 457 -  90668790 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Condylura_cristata.JH655891.1                           35808250 0 +  53390261 C
e Camelus_ferus.KB017975.1                                 1210207 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4666549 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7632262 0 +  17673402 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6753 22 +     36723 GAA-C-T--T--CAT----ATCCA----TTT----ATt-----t----c
s Acinonyx_jubatus.LLWD01001279.1                           814176 22 +   1699592 gaa-c-c--t--tat----at-------t-c----attgatgtc-----
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27434 23 +     63021 AGAAT-T--T--AAT----AG---TAATT-T----ATT-----T----C
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416637 22 +  29979442 gca-c-a--t--tgt----at-------t-c----atttattta-----
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216964 20 +    347723 --c-c-a--t--tgt----at-------t-c----atttattta-----
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19813 22 -     61208 gag-c-t--t--tat----at---tcatt-t----att-----t----t
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49457 22 +     53615 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1488 22 +     13857 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18039 22 -     21945 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19724 22 +     32033 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73502 22 -     84148 gaa-c-t--t--cat----atcca----ttt----att-----t----t
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45741 22 -     78289 gaa-c-t--t--cat----atcca----ttt----att-----t----t
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45180 22 +     55831 gaa-c-t--t--cat----atcca----ttt----att-----t----t
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43630 22 -     64179 gaa-c-t--t--cat----atcca----ttt----att-----t----t
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            737 22 -      3959 gaa-c-t--t--cat----atcca----ttt----att-----t----t
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42255 22 +     45454 gaa-c-t--t--cat----atcca----ttt----att-----t----t
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47904 22 +     70886 gaa-c-t--t--cat----atcca----ttt----att-----t----t
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10077 22 +     30854 gaa-c-t--t--cat----atcca----ttt----att-----t----t
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34211 22 +     42133 gaa-c-t--t--cat----atcca----ttt----att-----t----t
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587025 17 +   2318259 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178442 17 -    412891 gaa-c-ttta--tat----a----------c----att-----t-----
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52102 17 -     68529 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2469 22 +     17741 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3094 22 -     15923 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673376 22 +   5030052 gaA-C-T--T--CAt----atcca----ttt----att-----t----c
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3370 22 -     16391 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2929 22 -     17186 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17443 22 -     32367 gag-a-t--t--tat----tc---taatt-t----act-----t----c
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21502 22 -     45910 gaa-c-t--t--cat----attca----ttg----att-----t----t
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6700 17 -     15198 gaa-c-ttta--tat----a----------c----att-----t-----
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275967 22 +  21539123 gaa-c-t--t--cat----atccg----ttt----att-----t----t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12134 22 +     48076 gaa-c-t--t--cat----atccg----ttt----att-----t----t
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7269 22 -     28759 gaa-c-t--t--cat----atccg----ttt----att-----t----t
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34824 22 +     44353 gaa-c-t--t--cat----atccg----ttt----att-----t----t
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50194 22 -     71267 gaa-c-t--t--cat----atccg----ttt----att-----t----t
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24252 22 -     33135 gaa-c-t--t--cat----atccg----ttt----att-----t----t
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7516 22 +     11645 gaa-t-t--t--tat----attca----ttt----att-----t----t
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7524 22 -     19611 gaa-t-t--t--tat----attca----ttt----att-----t----t
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964786 17 -  23207421 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1286 17 -     25979 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88031 17 +    124022 gaa-c-a--t--cat----at-------t-c----att-----t-----
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23562 17 +    288883 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357952 17 +  48749331 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756516 17 +   1948126 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546658 17 -  45695690 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531666 17 -   4408762 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9061 22 +     28062 gaa-c-t--t--cac----atcca----ttt----att-----t----c
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44355 22 -     91139 gaa-c-t--t--cac----atcca----ttt----att-----t----c
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21881 22 +     95584 gaa-c-t--t--cac----atcca----ttt----att-----t----c
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21794 22 +    119600 gaa-c-t--t--cac----atcca----ttt----att-----t----c
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11449 22 +     18648 gaa-c-t--t--cat----atcca----ttg----att-----t----c
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10965 22 -     13885 gaa-c-t--t--cat----atcca----tta----atg-----t----c
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3051 22 -      8861 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455443 22 + 189096842 GAA-C-T--T--CAT----ATCCA----TTT----ATT-----T----C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2966 22 +      8664 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632262 13 +  17673402 ------t--t--cat----at-------t-c----act-----t-----
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666549 13 +   7040546 ------t--t--cat----at-------t-c----act-----t-----
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210207 13 +   1652518 ------t--t--cat----at-------t-c----act-----t-----
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506532 22 +  60362399 aaa-c-c--t--tat----at-------t-c----atttatttc-----
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10168 22 -     23171 aaa-c-c--t--tat----at-------t-c----atttatttc-----
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223511 22 +   9314153 aaa-c-c--t--tat----at-------t-c----atttatttc-----
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616646 22 +  59632846 aaa-c-c--t--tat----at-------t-c----atttatttc-----
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108227 22 -  63665305 aaa-c-c--t--tat----at-------t-c----atttatttc-----
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410754 17 -  46296322 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26593028 17 +  44709034 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    763 22 -      1607 CAA-C-T--T--TTT----AT---TCATT-T----GTT-----T----T
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271753 22 +    496798 gaa-c-t--t--tgt----attta----ttt----gtt-----t----c
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1570 17 +      9923 gaa-c-ttta--tat----a----------c----att-----t-----
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28932  9 -     39886 gaa-c-a--t--tat----------------------------------
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 7
s Catagonus_wagneri.CatWag_scaffold_2839                     80854 21 -    217609 gaa-c-t--t--cat----at-------t-tgtctatt-----t-----
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997660 22 +  23392119 caa-c-t--t--cat----ag---tcatt-t----gct-----t----t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001102 22 +  23407841 caa-c-t--t--cat----ag---tcatt-t----gct-----t----t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64181 22 -     66877 caa-c-t--t--cat----ag---tcatt-t----gct-----t----t
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6364 22 -     12580 gaa-c-t--t--cat----atcca----ttg----att-----t----c
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44422 22 +     53515 gaa-c-t--t--cat----atcca----ttg----att-----t----c
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374190 22 -  26074798 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9244 22 -     34880 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68340 22 -     89041 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3714 22 -      5494 gaa-c-t--t--tgt----attta----ttt----gtc-----t----c
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493473 17 -  27778364 gaa-c-t--t--tgt----at-------t-c----att-----t-----
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20306 17 +     27315 gaa-c-t--t--tgt----at-------t-c----att-----t-----
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142537 22 -   4669795 gaA-C-T--T--CAT----Atcca----ttt----att-----t----c
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46276 22 +     47900 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1709 22 -     14410 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46093 22 -    148725 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28371 22 -     40656 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8335 22 +     20796 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13444 22 -     17524 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29176 22 -     34525 gaa-c-t--t--cat----atccg----ttt----att-----t----c
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12956 22 -     25376 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365543 22 -  39242232 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271270 22 +  21565898 gaa-c-a--t--cat----atcca----ttt----att-----t----c
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33635 22 -     45857 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28539 22 -     32606 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4701 22 +      8499 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27097 22 +     70610 gaa-c-a--t--cat----atcca----ttt----att-----t----c
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24058 22 +     36323 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13903 22 -     19938 gag-c-t--t--tat----at-------t-c----act-----tatttc
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31912 22 -     33796 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6426 22 -     15404 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10169 22 -     32913 caa-c-t--t--cac----atcca----ttt----att-----t----c
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20582 22 -     40346 caa-c-t--t--cac----atcca----ttt----att-----t----c
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20837 22 +    216457 caa-c-t--t--cac----atcca----ttt----att-----t----c
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20626 22 +     39636 caa-c-t--t--cac----atcca----ttt----att-----t----c
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1239993 22 -   2543920 cag-c-t--t--tat----at---tcatt-t----gct-----t----t
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            289 22 +      1057 gaa-c-t--t--cat----atcta----ttt----att-----t----c
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43692 22 -    112038 gaa-c-t--t--cac----atcca----ttt----att-----t----c
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9243 22 +     34062 gaa-c-t--t--cac----atcca----ttt----att-----t----c
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344959 22 +  18827391 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11498 22 -     44032 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306350 22 - 135778131 gag-C-T--T--Cgt----atcca----ttt----att-----t----c
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  166 22 +     10270 gaa-c-t--t--tat----at-------t-c----att-----tattta
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607642 22 -    839153 gaa-c-t--t--tat----at-------t-c----att-----tattta
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_4313612                70 26 +       302 gaa-c-t--t--gatacatat-------t-t----att-----tattat
i Chrysochloris_asiatica.ChrAsi_scaffold_4313612         C 0 C 0
s Colobus_angolensis.KN981557.1                             410758 22 -   2368649 gaA-C-T--T--CAT----Atcca----ttt----att-----t----c
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380639 22 - 200372422 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4196 22 -     84244 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4057 17 -      8242 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46112 22 -     83289 aga-c-t--t--tat----at---tcttt-t----att-----t----c
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117802 22 - 224834208 aga-c-t--t--tat----ac---tcatg-t----att-----t----a
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              11039  4 +     12657 -------------AT----GT----------------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          I 2 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5629 22 +     87169 gaa-c-c--t--tat----aa-------t-c----attgatttc-----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646668 22 -   1526836 gag-c-a--t--tat----gt---taatt-g----att-----t----t
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19834 22 +     50838 CAA-C-T--T--TTT----AT---TTATT-T----GTT-----T----T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5571 16 +     36344 caa-c-t--t--cat----aa---ttatt--------------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 1
s Dasyprocta_punctata.DasPun_flattened_line_15900            29355 22 +     75252 caa-c-t--t--tat----aa---tcatt-t----att-----t----t
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111270 22 -   2246927 gga-c-t--t--tgt----at-------t-c----att-----tatttc
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293829 22 +  12879189 gaa-a-t--t--tat----attca----ttt----att-----t----t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633192 17 -  35494412 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866559 17 -  20541912 gaa-c-ctta--tat----a----------c----att-----t-----
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665745 17 -   1390856 gaa-c-t--t--tgt----at-------t-c----att-----t-----
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140545 17 -    198055 gaa-c-t--t--tgt----at-------t-c----att-----t-----
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100066 22 -    115145 cag-a-t--t--tat----at---taatt-t----gct-----t----t
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951836 22 -  37912305 gaa-c-a--t--gat----gt---taact-t----gtt-----t----t
i Dipodomys_ordii.KN672350.1                             C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_89095                   6770 22 -     10735 GAA-C-A--T--GAT----GT---TAACT-T----GTT-----T----T
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 1
s Echinops_telfairi.JH980293.1                            62856787 26 - 111700974 GAA-T-T--T--Tgtgcatat-------t-t----aat-----tatttt
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7531 17 +     19438 gaa-c-t--t--tat----at-------t-t----att-----t-----
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241382 17 -    607251 gaa-c-t--t--cac----at-------t-c----att-----t-----
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1226993 15 +  10337057 gac-g-t--t--tatacatat----------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 7
s Ellobius_lutescens.LOEQ01008920.1                          33653 20 +    110024 aga-c-t--t--tat----at---tcatt-t----ttt-----------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15656 20 +     18970 aga-c-t--t--cat----at---tcatt-t----ttt-----------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 1
s Enhydra_lutris.KZ291758.1                               24917374 22 +  41312741 gaa-c-a--t--tga----at-------t-c----acttatttc-----
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580152 17 +  14770903 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042690 17 -   4378816 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376628 17 +  39960074 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412610 17 -    498745 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667413 13 +   7059049 agA-A-C--A--TAT--TCAT----------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 2
s Erythrocebus_patas.Contig38                               264495 22 +  21539334 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72400 17 -    133382 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               113 17 +     25849 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16045 22 -     24895 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43755 22 -     70999 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87725 22 +    112731 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44288 22 +     68309 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54612 22 -     65740 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25245 22 -     75513 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49439 22 -     97555 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6163 22 +     30972 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43883 22 -     52037 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60286 22 -    111500 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248086 22 - 206538554 gaa-c-c--t--tct----at-------t-c----attgatgtc-----
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117872 22 - 205367284 AAA-C-C--T--TCT----AT-------T-C----ATTGATGTC-----
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28972 22 -     30238 GAA-C-C--T--TCT----AT-------T-C----ATTGATGTC-----
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923213 21 -   3816255 taa-c-t--t--tat----at---tcatt-a----att-----t-----
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126866 22 -    137831 gaa-c-t--t--cat----attca----ttg----att-----t----t
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10411 22 +     22493 gaa-c-t--t--cat----attca----ttg----att-----t----t
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22494 22 -     32986 gaa-c-t--t--cat----attca----ttg----att-----t----t
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2437  9 -     28519 --------------------t-------ttt----att-----a----c
i Galeopterus_variegatus.GalVar_scaffold_51812           I 5 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93099 17 -     95226 gaa-c-t--t--cat----gt-------t-c----att-----t-----
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2573 20 -      6791 gaa-t-t--t--tat----at---ccatt-t----att-----------
i Glis_glis.GliGli_scaffold_163929                       C 0 I 1
s Gorilla_beringei.k141_3358147                               7062 22 -      8343 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                256069 22 - 186649187 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3639 20 -     78134 gaa-t-t--t--tat----at---ccatt-t----att-----------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 1
s Hapalemur_alaotrensis.k141_330369                          15970 22 -     40692 gaa-c-t--t--tat----gttca----ttt----att-----t----t
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37369 22 +     49394 gaa-c-t--t--tat----gttca----ttt----att-----t----t
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62240 22 -     66874 gaa-c-t--t--tat----gttca----ttt----att-----t----t
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11111 22 -     42923 gaa-c-t--t--tat----gttca----ttt----att-----t----t
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18113 22 -     53142 gaa-c-t--t--tat----gttca----ttt----att-----t----t
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32062 22 -    327341 gaa-c-c--t--tat----at-------t-c----attgacttc-----
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10765 17 +     48891 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933632 21 -  22651954 caa-c-t--t--tat----at---tcatt-t----att-----t-----
i Heterocephalus_glaber.JH602082.1                       C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1502 22 +      8654 aaa-c-c--t--tag----gt-------t-g----att-----tattgc
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8908 17 -     36432 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552900 17 -   1711038 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_164997               2337 17 -      2730 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 1
s Hoolock_leuconedys.ctg274                                    144069 22 -    630532 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71435 22 +     83186 gaa-c-c--t--tat----at-------t-c----attgatttc-----
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73060 14 +    143317 --------------a----aa---tcatt-t----att-----t----t
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3 C 0
s Hylobates_agilis.k141_1155965                               7114 22 +     12352 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14298 22 +     55766 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053898 22 + 191637585 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802776 22 +  11177569 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8385 22 -    135385 caa-c-t--t--tat----at---tcatt-t----att-----t----t
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388111 22 +   7955117 gag-a-t--t--tat----at---tcatt-t----act-----t----c
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3659 22 +     11955 gaa-c-t--t--tag----attca----ttt----att-----t----t
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11295 17 -     16823 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241294 22 +   9596543 gag-c-t--t--tat----ct---ccatt-t----att-----t----t
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73135 17 -     97402 gaa-c-t--t--cat----at-------t-c----gtt-----t-----
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44518 22 +    110728 gaa-c-t--t--cat----atcca----ttt----att-----t----t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64450 17 -     65777 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760767 22 +  30322482 gaa-c-t--t--tat----gttca----ttt----att-----t----t
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5425 22 -     13097 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5179 22 +      5940 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5002 22 -      5717 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11388 22 -     11567 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Leontopithecus_chrysomelas.k141_1327670                C 0 C 0
s Leontopithecus_rosalia.k141_349454                         12769 22 -     12945 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Leontopithecus_rosalia.k141_349454                     C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10283 22 +     29618 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10279 22 +     31569 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10289 22 +     24756 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10289 22 +     16388 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814765 22 -   3914936 gaa-c-a--t--tgt----at-------t-c----atttatttc-----
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342480 17 +    662738 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335422 22 -   1826925 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12578 22 +     19643 gaa-t-t--g--cat----attta----ttg----att-----t----t
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046248 22 -   6120653 gaa-t-t--g--cat----attta----ttg----att-----t----t
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086166 22 +  43346337 gag-c-c--t--tat----at-------t-t----gtt-----tatcgt
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615801 22 +  59628241 aaa-c-c--t--tat----at-------t-c----atttatttc-----
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46811 22 -     61512 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374473 22 -  60120075 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26741 22 +     30207 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1579 22 -      5035 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26694 22 +     30527 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37870 22 -     50087 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47614 22 +     51645 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416817 22 - 187317192 gaA-C-T--T--CAT----Atcca----ttt----att-----t----c
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401047 22 +  25927173 gaA-C-T--T--CAT----Atcca----ttt----att-----t----c
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50219 22 -     62418 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2750 22 +     14901 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46691 22 +     59329 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272599 22 +    668171 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1243 10 -      5049 ----------------------ca----ttt----att-----t----c
i Macaca_thibetana.k99_45532                             I 6 C 0
s Macaca_tonkeana.k141_339739                                 4397 22 +     17132 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224513 17 -    270270 gaa-c-t--t--tat----at-------t-t----att-----t-----
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323887 22 +  24302211 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358718 22 -    752769 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674812 17 -    737560 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222112 17 +    317179 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502325 22 +  40650429 gag-a-t--t--tat----at---tcatt-t----act-----t----c
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151682 16 +    207569 gta-c-t--t--tat----at-------t-c----att-----------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 4
s Mellivora_capensis.MelCap_flattened_line_19308             27493 22 -     74585 gaa-c-a--t--tga----at-------t-c----acttatttc-----
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52074 22 -    140813 aga-c-g--t--cac----gg---taatt-t----att-----t----c
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88764 17 +     93471 gaa-c-g--t--cat----at-------t-c----att-----t-----
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11547 22 +     17804 gaa-c-t--t--cat----atcca----ttg----att-----t----c
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12047 22 -     12984 gaa-c-t--t--cat----atcca----ttg----att-----t----c
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20366 22 -     26561 gaa-c-t--t--cat----atcca----ttg----att-----t----c
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986121 22 +  93316391 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47960 26 +    145209 gaa-t-t--t--tatgcatat-------t-t----aat-----tatttt
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186349 17 +    200668 gaa-c-ttta--tat----a----------c----att-----g-----
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965102 24 +  27267610 aga-cct--t--tat----at---tcatt-t----ttt-----t---cc
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364506 17 -   8254450 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43419 19 -     48117 gaa-c-t--ttttat----gt-------t-c----att-----t-----
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         23987 22 -     27822 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9776 22 +     27589 GAA-C-A--T--GGT----AT-------T-C----ATTTATTTC-----
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53897 21 -     62432 gaa-c-t--t--tat----attc-----ttt----att-----t----t
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360869 17 +    437263 GAA-C-T--T--CAT----AT-------T-C----ATT-----T-----
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180594 17 +    366855 gac-c-ttta--tat----a----------c----atc-----t-----
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27210 17 -     82753 gaa-c-t--t--cat----gt-------t-c----att-----t-----
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19796 22 -     63510 gaa-c-c--t--tat----at-------t-c----attgatttc-----
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42454 17 +     47283 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596279 18 + 120012414 AGA-C-G--T--TGT----ag---tcatt-t----a-------------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689476 18 + 129401213 aga-c-t--t--tgt----ag---tcatt-c----a-------------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217818 18 +  89631738 aga-c-t--t--tgc----ag---tcatt-t----a-------------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498761 18 + 130317789 aga-c-t--t--tgt----ag---ttatt-t----a-------------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85477 20 -     86153 gaa-t-t--t--tat----at---tcatt-t----att-----------
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 1
s Mustela_putorius.JH418006.1                             14356399 11 +  14710649 GAA-C-A--T--TGA----AG----------------------------
i Mustela_putorius.JH418006.1                            C 0 I 3
s Myocastor_coypus.MyoCoy_scaffold_15261                     64351 22 +     67721 caa-c-t--t--ttt----at---tcatt-t----gtt-----t----t
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794716 17 +  10118263 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388891 17 +   6019432 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384919 17 +   4330536 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3704 17 +     18357 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121051 22 +    130748 gaa-c-t--t--tat----gt-------t-c----att-----tatttc
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947976 17 +   3037898 AAA-C-T--T--TAT----c--------c-t----att-----t----c
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30709 22 +     34575 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233535 17 -   7148211 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129200 15 -    149072 gaa-c-t--a--tat----a----------c----att-----t-----
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55000 22 -    132029 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11095 22 -     16345 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             16980 22 +     22201 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415201 22 -  22158432 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27378 22 -     54323 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199397 22 +   9404916 aaa-c-c--t--tat----at-------t-c----atttatttc-----
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639471 22 + 196305487 gaa-t-t--g--cat----attta----ttg----att-----t----t
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             2074 22 -      9413 gaa-t-t--g--cat----attta----ttg----att-----t----t
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566854 22 - 199412804 gaa-t-t--g--cat----attta----ttg----att-----t----t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558168 16 -   3988456 gaa-c-t--t--ta------t-------t-t----att-----t----c
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056441 22 -  11899542 caa-t-t--t--ttt----at---ttatt-t----gtt-----t----t
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453194 22 +   2017862 gaa-c-a--t--tgt----at-------t-c----atttatttc-----
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         438297 17 -    630418 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Odocoileus_virginianus.KZ100018.1                      I 307 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16181 17 +    150152 gaa-c-g--t--cat----at-------t-c----att-----t-----
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95775 22 -    140218 aga-c-t--t--cat----at---tcatt-t----att-----t----c
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6321 22 -     41509 aga-t-t--t--tat----at---tcctt-t----att-----t----t
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103938 17 +  10937097 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1232 26 +     11607 gaa-c-t--t--tatacatat-------t-g----att-----tattat
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40443 22 +    559221 aaa-c-c--t--tat----gt-------t-c----atttatttc-----
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        42025 22 -     51505 gaa-c-t--t--cat----attca----ttg----att-----t----t
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             355030 22 +   1103335 gaa-c-t--t--cat----attca----ttg----att-----t----t
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405892 17 -  44047080 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6411 17 +     17875 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1474097 22 - 189151597 gaa-C-T--T--CAt----atcca----ttt----att-----t----c
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25795 22 -    230217 gaa-c-c--t--tat----at-------t-c----attgatgtc-----
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463121 22 -  18783137 gaa-c-c--t--tat----at-------t-c----attgatgtc-----
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973780 22 +   8748460 gaa-c-c--t--tat----at-------t-c----attgatgtc-----
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617417 17 +   2937107 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244896 22 - 183742232 gaA-C-T--T--Cat----atcca----ttt----att-----t----c
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11181 22 +     21308 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293924 22 -  20919399 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23829 22 -     27687 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     500 22 +     10553 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   460 22 -     10386 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16376 22 +     78924 gaa-c-c--t--tat----at-------t-c----attgatttc-----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28357 22 +     31479 gaa-c-t--t--cat----attca----ttg----att-----t----t
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20725 22 -     24908 gaa-c-t--t--cat----attca----ttg----att-----t----t
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3178 21 +      9367 gca-c-a--t--gat----gt---caact-t----gtt-----t-----
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249544 19 +  18517816 aga-t-t--t--tat----at---tcatt-t----at------------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33218 19 -     56120 caa-c-t--t--tat----at---tcatt-t----at------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5463 17 -     63832 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            4146 22 +     55023 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3616 22 -     89929 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4206 22 +     40849 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255881 22 +  14605196 tAA-C-T--T--CAT----Atcca----ttt----att-----t----c
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5287 17 +     22231 gaa-a-t--t--tat----at-------t-c----att-----t-----
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66060 22 +    207309 gaa-c-t--t--cac----atcca----ttt----att-----t----c
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7148 22 -     25401 gaa-c-t--t--cac----atcca----ttt----att-----t----c
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32896 22 +     58159 gaa-c-t--t--cac----atcca----ttt----att-----t----c
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33172 22 +     63561 gaa-c-t--t--cac----atcca----ttt----att-----t----c
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32932 22 +     51148 gaa-c-t--t--cac----atcca----ttt----att-----t----c
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557902 22 -   4542175 gaa-c-t--t--cac----atcca----ttt----att-----t----c
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32916 22 +     51125 gaa-c-t--t--cac----atcca----ttt----att-----t----c
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2480 17 +     19503 GAA-C-T--T--CAT----AA-------T-T----GTT-----T-----
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9334 22 +     39866 caa-c-t--t--cac----atcca----ttt----att-----t----c
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4416 22 -      9282 caa-c-t--t--cac----atcca----ttt----att-----t----c
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43820 22 -     87950 caa-c-t--t--cac----atcca----ttt----att-----t----c
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44214 22 -     88961 caa-c-t--t--cac----atcca----ttt----att-----t----c
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8912 22 -     39403 caa-c-t--t--cac----atcca----ttt----att-----t----a
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43863 22 +     87928 caa-c-t--t--cac----atcca----ttt----att-----t----c
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8911 22 -     60166 caa-a-t--t--cac----atcca----ttt----att-----t----c
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15848 22 -     67232 caa-c-t--t--cac----atcca----ttt----att-----t----c
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43764 22 -     90634 caa-c-t--t--cac----atcca----ttt----att-----t----c
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45231 22 +     89403 caa-a-t--t--cac----atcca----ttt----att-----t----c
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179210 22 - 189387572 gaa-t-t--t--cat----atcca----ttt----att-----t----c
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      194027 22 -   9816681 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_980496                                1009 22 -      1047 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Presbytis_comata.k141_980496                           C 0 C 0
s Presbytis_mitrata.k141_584736                              46472 22 -     80239 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5493 22 +      7663 aaa-c-c--t--tag----gt-------t-g----att-----tattgc
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983915 22 +   4620579 gaa-c-t--t--tat----gttca----ttt----att-----t----t
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567410 22 -   2598838 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5048 22 -      7103 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5645 22 -     11706 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9382 22 -     30655 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35696 22 +     46564 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95975 22 -     98465 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9614 22 +     35169 gaa-c-t--t--tat----attca----ttt----att-----t----t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39599 22 +     52041 aga-c-t--t--aac----gg---taatt-t----att-----t----t
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53487 17 -     66298 gga-t-ttta--tgt----a----------c----ctt-----t-----
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5971 22 -     18639 gaa-c-a--t--tga----at-------t-c----acttatttc-----
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842084 17 -  28871421 gaa-c-t--t--tat----at-------t-t----att-----t-----
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538599 17 -   4952924 gaa-c-t--t--tat----at-------t-t----att-----t-----
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100435 22 +  38429054 gaa-c-c--t--tat----at-------t-c----attgatgtc-----
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28658 22 +     91421 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155210 22 -   7812017 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9515 22 +     72585 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   342 17 -     55207 gaa-c-t--t--cat----at-------t-c----att-----t-----
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 307 C 0
s Rattus_norvegicus.chr16                                 37024500  2 -  90668790 ------------------------------------tc-----------
i Rattus_norvegicus.chr16                                I 457 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916050 17 +   3329780 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 1
s Rhinopithecus_bieti.k119_778604                             3177 22 +      7119 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123792 22 + 195417433 tAA-C-T--T--CAT----Atcca----ttt----att-----t----c
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238019 22 -   7961872 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76584 17 -    116970 gaa-c-t--t--tat----at-------t-t----att-----t-----
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                289 22 -      1130 gaa-c-t--t--cat----atcta----ttt----att-----t----c
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5191 22 +      6077 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5285 22 +      5971 gaa-c-t--t--cat----atcca----ttc----att-----t----c
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5202 22 +      5932 gaa-c-t--t--cat----atcca----ttc----att-----t----c
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3547 22 -      4390 gaa-c-t--t--cat----atcca----ttc----att-----t----c
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393304 22 - 209938924 gaa-c-t--t--cat----atcta----ttt----att-----t----c
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5150 22 +      5979 gaa-c-t--t--cat----atcca----ttc----att-----t----c
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1720 22 -     22275 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9580 17 +     16473 gaa-c-t--t--cat----at-------t-a----att-----t-----
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110313 22 + 121099817 gaA-C-T--T--TAT----ATCCA----TTT----ATT-----T----C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31880 22 -     47369 gaa-c-t--t--tat----atcca----ttt----att-----t----c
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32266 22 -     79414 gaa-c-t--t--tgt----atcca----ttt----att-----t----c
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28957 22 -     34454 gaa-c-t--t--tat----atcca----ttt----att-----t----c
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16358 22 -     22428 gaa-c-t--t--tgt----atcca----ttt----att-----t----c
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31512 22 -     47109 gaa-c-t--t--tat----atcca----ttt----att-----t----c
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239564 22 +   5703754 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9154 22 +     21866 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26862  5 +     27374 -----------------------------------att-----t----c
i Semnopithecus_entellus.k141_158471                     I 65 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30493 22 +     58920 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           16991 22 -     45317 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24649 22 -     42441 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27327 22 -     29113 TAA-C-T--T--CAT----AGCCA----TTT----ATT-----T----C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30402 22 -     48123 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51333 22 +     77746 aga-c-t--t--tat----at---tcatt-t----act-----t----c
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865452 11 -   1910179 atg-c-t--t--tat----gt----------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 2
s Sorex_araneus.JH798187.1                                 4672546  4 +  18376816 -------------AT----GT----------------------------
i Sorex_araneus.JH798187.1                               I 5 I 2
s Spermophilus_dauricus.KZ294078.1                         1869689 22 +   3870691 gag-a-t--t--tat----at---tcatt-t----att-----t----c
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8046 22 -     97271 gaa-t-a--t--tat----at-------t-c----atttatttc-----
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126213 22 +    196729 gaa-c-c--t--tat----at-------t-c----attgatttc-----
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645251 21 +  69701581 gaa-c-t--t--cat----at-------t-tgtatatt-----t-----
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392466 22 +   1523678 gaa-c-t--t--cat----atcca----ttt----att-----t----c
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15627 17 +     22964 gga-c-t--t--tat----at-------t-c----att-----t-----
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4043 22 +      5583 gaa-c-t--t--tat----gt-------t-c----att-----tatttc
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192937 17 +    199430 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106905 17 -    539355 gaa-c-t--t--tat----at-------t-c----att-----t-----
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                1979 22 +      9917 gaa-c-t--t--tgt----attta----ttt----att-----t----c
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8777 22 +     20590 gaa-c-t--t--tgt----attta----ttt----att-----t----c
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354705 22 - 186847797 gaA-C-T--T--CAT----Atcca----ttt----att-----t----c
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25371 19 -     33621 caa-c-t--t--tat----tt---tcatt-t----at------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   20999 22 -     31044 tag-c-t--t--tat----at-------t-c----att-----tatttc
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481479 17 -    610378 gaa-c-ttta--tat----a----------c----att-----t-----
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22458 22 +     26378 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35202 22 -     78344 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21783 22 +     25722 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30158 22 -     62838 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30202 22 +     46913 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10941 22 -     28527 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32093 22 -     64340 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30131 22 -     63452 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11578 22 +     22490 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5001 22 -      6147 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11914 22 -     13050 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257076 22 -   6242583 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3172 22 +     19340 taa-c-t--t--cat----atcca----ttt----att-----t----c
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175193 17 -    200418 gaa-c-t--t--cat----at-------t-t----att-----t-----
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482861 22 -  10818551 gaa-c-c--t--tat----gt-------t-t----atc-----tctggt
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836413  6 -   4065304 ------------------------------t----att-----t----c
i Tupaia_chinensis.KB320699.1                            I 6 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10448  6 -     70247 ------------------------------t----att-----t----c
i Tupaia_tana.TupTan_flattened_line_394                  I 6 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367063 11 -  33153633 gaa-c-t--t--cat----at----------------------------
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 6
s Uropsilus_gracilis.UroGra_scaffold_46687                    4850 11 -     21056 GAA-C-T--T--TAC----AT----------------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 2
s Ursus_maritimus.KK499267.1                                183414 22 +   5085361 gaa-c-a--t--tgt----at-------t-c----atttattta-----
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26568 22 -     30710 gaa-c-t--t--tat----gttca----ttt----att-----t----t
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25475 22 -    147434 gaa-c-t--t--tat----gttca----ttt----att-----t----t
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77598 13 +   5488506 ------T--T--CAt----at-------t-c----act-----t-----
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106166 22 -    112863 aaa-c-c--t--tat----at-------t-c----atttatttc-----
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175445 18 -    224448 gag-a-t--t--tat----at------t--t----agt-----t----c
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30406 22 -     86975 gaa-c-a--t--tgt----at-------t-c----atttctttc-----
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1244 22 -      1899 GAA-C-T--T--TAT----AA---TCATT-T----ATT-----T----C
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955  0 +    313613 C
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Condylura_cristata.JH655891.1                           35808250  0 +  53390261 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6775 25 +     36723 a------------t------------t---ttatcttgagaggtgacagcat
s Acinonyx_jubatus.LLWD01001279.1                           814198  6 +   1699592 a------------t------------t---tcc-------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27457  6 +     63021 A------------T------------T---TCA-------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416659  6 +  29979442 a------------t------------t---tca-------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216984  6 +    347723 a------------t------------t---tca-------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19835  6 -     61208 a------------t------------t---tta-------------------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49479  6 +     53615 t------------t------------t---tca-------------------
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1510  6 +     13857 t------------t------------t---tca-------------------
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18061  6 -     21945 t------------t------------t---tca-------------------
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19746  6 +     32033 t------------t------------t---tca-------------------
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73524  6 -     84148 a------------t------------t---tca-------------------
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45763  6 -     78289 a------------t------------t---tca-------------------
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45202  6 +     55831 a------------t------------t---tca-------------------
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43652  6 -     64179 a------------t------------t---tca-------------------
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            759  6 -      3959 a------------t------------t---tca-------------------
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42277  6 +     45454 a------------t------------t---tca-------------------
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47926  6 +     70886 a------------t------------t---tca-------------------
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10099  6 +     30854 a------------t------------t---tca-------------------
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34233  6 +     42133 a------------t------------t---tca-------------------
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587042  6 +   2318259 a------------t------------t---tca-------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178459 11 -    412891 g------------tttcat-------c---tta-------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52119  6 -     68529 a------------t------------t---tca-------------------
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2491  6 +     17741 a------------t------------t---tca-------------------
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3116  6 -     15923 a------------t------------t---tca-------------------
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673398  6 +   5030052 a------------t------------t---tca-------------------
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3392  6 -     16391 a------------t------------t---tca-------------------
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2951  6 -     17186 a------------t------------t---tca-------------------
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17465  6 -     32367 a------------t------------t---tTG-------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21524  6 -     45910 a------------t------------t---tca-------------------
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6717 11 -     15198 a------------cttca-----c--t---tta-------------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275989  6 +  21539123 a------------t------------t---tcc-------------------
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12156  6 +     48076 a------------t------------t---tcc-------------------
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7291  6 -     28759 a------------t------------t---tcc-------------------
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34846  6 +     44353 a------------t------------t---tcc-------------------
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50216  6 -     71267 a------------t------------t---tcc-------------------
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24274  6 -     33135 a------------t------------t---tcc-------------------
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7538  6 +     11645 a------------t------------t---tca-------------------
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7546  6 -     19611 a------------t------------t---tca-------------------
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964803 12 -  23207421 at---cagt---at------------t---tca-------------------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1303 12 -     25979 at---cagt---at------------t---tca-------------------
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88048  6 +    124022 a------------t------------t---tca-------------------
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23579  6 +    288883 a------------t------------t---tca-------------------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357969  6 +  48749331 a------------t------------t---tca-------------------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756533  6 +   1948126 a------------t------------t---tca-------------------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546675  6 -  45695690 a------------t------------t---tca-------------------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531683  6 -   4408762 a------------t------------t---tca-------------------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9083  6 +     28062 a------------t------------t---tca-------------------
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44377  6 -     91139 a------------t------------t---tca-------------------
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21903  6 +     95584 a------------t------------t---tca-------------------
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21816  6 +    119600 a------------t------------t---tca-------------------
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11471  6 +     18648 a------------t------------t---tca-------------------
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10987  6 -     13885 a------------t------------t---tca-------------------
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3073  6 -      8861 a------------t------------t---tca-------------------
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455465  6 + 189096842 A------------T------------T---TCA-------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2988  6 +      8664 a------------t------------t---tca-------------------
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632275 11 +  17673402 atttt-------ct------------t---tcg-------------------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666562 11 +   7040546 atttt-------ct------------t---tca-------------------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210220 11 +   1652518 atttt-------ct------------t---tcg-------------------
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506554  6 +  60362399 a------------t------------t---tta-------------------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10190  6 -     23171 a------------t------------t---tta-------------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223533  6 +   9314153 a------------t------------t---tta-------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616668  6 +  59632846 a------------t------------t---tta-------------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108249  6 -  63665305 a------------t------------t---tta-------------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410771  6 -  46296322 a------------t------------t---tca-------------------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26593045  6 +  44709034 a------------t------------t---tca-------------------
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    785  6 -      1607 A------------T------------T---TCA-------------------
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271775  6 +    496798 a------------t------------t---tca-------------------
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1587 11 +      9923 a------------tt-c------catt---tta-------------------
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28948  6 -     39886 a------------t------------t---tca-------------------
i Castor_canadensis.CasCan_scaffold_39952                I 7 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80875  6 -    217609 a------------t------------t---tca-------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997682  6 +  23392119 a------------t------------t---tca-------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001124  6 +  23407841 a------------t------------t---tca-------------------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64203  6 -     66877 a------------t------------t---tca-------------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6386  6 -     12580 a------------t------------t---tca-------------------
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44444  6 +     53515 a------------t------------t---tca-------------------
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374212  6 -  26074798 a------------t------------t---tca-------------------
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9266  6 -     34880 a------------t------------t---tca-------------------
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68362  6 -     89041 a------------t------------t---tca-------------------
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3736  6 -      5494 a------------t------------t---tca-------------------
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493490 11 -  27778364 a------------tttcat-------t---tca-------------------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20323 11 +     27315 a------------tttcat-------t---tca-------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142559  6 -   4669795 c------------t------------t---tca-------------------
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46298  6 +     47900 c------------t------------t---tca-------------------
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1731  6 -     14410 c------------t------------t---tca-------------------
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46115  6 -    148725 c------------t------------t---tca-------------------
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28393  6 -     40656 t------------t------------t---tca-------------------
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8357  6 +     20796 t------------t------------t---tca-------------------
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13466  6 -     17524 t------------t------------t---tca-------------------
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29198  6 -     34525 t------------t------------t---tca-------------------
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12978  6 -     25376 t------------t------------t---tca-------------------
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365565  6 -  39242232 t------------t------------t---tca-------------------
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271292  6 +  21565898 t------------t------------t---tca-------------------
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33657  6 -     45857 t------------t------------t---tca-------------------
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28561  6 -     32606 t------------t------------t---tca-------------------
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4723  6 +      8499 t------------t------------t---tca-------------------
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27119  6 +     70610 t------------t------------t---tca-------------------
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24080  6 +     36323 t------------t------------t---tca-------------------
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13925  6 -     19938 a------------t------------t---tca-------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31934  6 -     33796 a------------t------------t---tca-------------------
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6448  6 -     15404 a------------t------------t---tca-------------------
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10191  6 -     32913 a------------t------------t---tca-------------------
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20604  6 -     40346 a------------t------------t---tca-------------------
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20859  6 +    216457 a------------t------------t---tca-------------------
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20648  6 +     39636 a------------t------------t---tca-------------------
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240015  6 -   2543920 a------------t------------t---tca-------------------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            311  6 +      1057 a------------t------------t---tca-------------------
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43714  6 -    112038 a------------t------------t---tca-------------------
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9265  6 +     34062 a------------t------------t---tca-------------------
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344981  6 +  18827391 t------------t------------t---tca-------------------
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11520  6 -     44032 t------------t------------t---tca-------------------
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306372  6 - 135778131 t------------t------------t---tca-------------------
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  188  6 +     10270 a------------t------------t---tca-------------------
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607664  6 -    839153 a------------t------------t---tca-------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_4313612                96  6 +       302 a------------t------------c---tcc-------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_4313612         C 0 I 23
s Colobus_angolensis.KN981557.1                             410780  6 -   2368649 c------------t------------t---tca-------------------
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380661  6 - 200372422 c------------t------------t---tca-------------------
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4218  6 -     84244 c------------t------------t---tca-------------------
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4074 10 -      8242 -------------tttcat-------t---tca-------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46134  6 -     83289 a------------t------------t---tca-------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117824  6 - 224834208 a------------t------------t---tca-------------------
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              11045  9 +     12657 G------------T------------TAAAGCT-------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5651  6 +     87169 a------------t------------t---tca-------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646690  6 -   1526836 g------------t------------c---tca-------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19856  6 +     50838 A------------T------------T---TCA-------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5588  6 +     36344 a------------t------------t---tca-------------------
i Cuniculus_paca.CunPac_flattened_line_7025              I 1 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29377  6 +     75252 a------------t------------t---tca-------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111292  6 -   2246927 a------------t------------t---tca-------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293851  6 +  12879189 a------------t------------t---tca-------------------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633209 12 -  35494412 atccgta------t------------t---tca-------------------
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866576 11 -  20541912 a------------tttcat-------t---tca-------------------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665762 11 -   1390856 a------------tttcat-------t---tca-------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140562 11 -    198055 a------------tttcat-------t---tca-------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100088  6 -    115145 a------------t------------t---cca-------------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951859  6 -  37912305 a------------t------------c---tca-------------------
i Dipodomys_ordii.KN672350.1                             I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6793  6 -     10735 A------------T------------C---TCA-------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 1 C 0
s Echinops_telfairi.JH980293.1                            62856813  6 - 111700974 a------------t------------t---ctc-------------------
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7548 23 +     19438 atttttatttttattt-a------att---taa-------------------
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241399  6 -    607251 a------------t------------t---tca-------------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1227015  6 +  10337057 a------------t------------t---tcc-------------------
i Elephantulus_edwardii.JH947257.1                       I 7 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33673  3 +    110024 ------------------------------tca-------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15677  6 +     18970 a------------t------------t---tca-------------------
i Ellobius_talpinus.LOJH01026522.1                       I 1 C 0
s Enhydra_lutris.KZ291758.1                               24917396  6 +  41312741 a------------t------------t---tca-------------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580169 11 +  14770903 a------------tttcat-------t---tta-------------------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042707 11 -   4378816 c------------tttcat-------t---tca-------------------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376645 11 +  39960074 c------------tttcat-------t---tca-------------------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412627 11 -    498745 c------------tttcat-------t---tca-------------------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667428  6 +   7059049 A------------T------------T---GCA-------------------
i Erinaceus_europaeus.JH835339.1                         I 2 C 0
s Erythrocebus_patas.Contig38                               264517  6 +  21539334 t------------t------------t---tca-------------------
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72417 12 -    133382 at---cagt---at------------t---tca-------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               130 12 +     25849 at---cagt---at------------t---tca-------------------
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16067  6 -     24895 a------------t------------t---tca-------------------
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43777  6 -     70999 a------------t------------t---tca-------------------
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87747  6 +    112731 a------------t------------t---tca-------------------
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44310  6 +     68309 a------------t------------t---tca-------------------
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54634  6 -     65740 a------------t------------t---tca-------------------
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25267  6 -     75513 a------------t------------t---tca-------------------
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49461  6 -     97555 a------------t------------t---tca-------------------
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6185  6 +     30972 a------------t------------t---tca-------------------
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43905  6 -     52037 a------------t------------t---tca-------------------
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60308  6 -    111500 a------------t------------t---tca-------------------
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248108  6 - 206538554 a------------t------------t---tcc-------------------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117894  6 - 205367284 A------------T------------T---TCC-------------------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 28994  6 -     30238 A------------T------------T---TCC-------------------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923234  4 -   3816255 --------------------------t---tca-------------------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126888  6 -    137831 a------------t------------t---tca-------------------
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10433  6 +     22493 a------------t------------t---tca-------------------
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22516  6 -     32986 a------------t------------t---tca-------------------
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2446  6 -     28519 a------------t------------t---tcg-------------------
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93116  6 -     95226 a------------t------------t---tca-------------------
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2594  6 -      6791 a------------t------------t---tca-------------------
i Glis_glis.GliGli_scaffold_163929                       I 1 C 0
s Gorilla_beringei.k141_3358147                               7084 25 -      8343 a------------t------------t---ttatcTtgagaggtgacagcgt
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                256091 25 - 186649187 a------------t------------t---ttatcttgagaggtgacagcgt
i Gorilla_gorilla.LT578341.1                             C 0 I 339
s Graphiurus_murinus.GraMur_scaffold_10447                    3660  6 -     78134 a------------t------------t---tca-------------------
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 C 0
s Hapalemur_alaotrensis.k141_330369                          15992  6 -     40692 a------------t------------t---tca-------------------
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37391  6 +     49394 a------------t------------t---tca-------------------
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62262  6 -     66874 a------------t------------t---tca-------------------
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11133  6 -     42923 a------------t------------t---tca-------------------
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18135  6 -     53142 a------------t------------t---tca-------------------
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32084  6 -    327341 a------------t------------t---tca-------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10782  6 +     48891 a------------t------------t---tca-------------------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933656  4 -  22651954 --------------------------t---tca-------------------
i Heterocephalus_glaber.JH602082.1                       I 3 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1524  6 +      8654 a------------c------------t---tcc-------------------
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8925  6 -     36432 a------------t------------t---tca-------------------
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552918 10 -   1711038 -------------ttt--t-----att---tca-------------------
i Hipposideros_armiger.JXIK01000431.1                    I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2355 10 -      2730 -------------ttt--t-----att---tca-------------------
i Hipposideros_galeritus.HipGal_scaffold_164997          I 1 C 0
s Hoolock_leuconedys.ctg274                                    144091  6 -    630532 a------------t------------t---tca-------------------
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71457  6 +     83186 a------------t------------t---tca-------------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73074  6 +    143317 a------------t------------t---tca-------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7136  6 +     12352 a------------t------------t---tcg-------------------
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14320  6 +     55766 a------------t------------t---tcg-------------------
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053920  6 + 191637585 a------------t------------t---tcg-------------------
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802798  6 +  11177569 a------------t------------t---tcg-------------------
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8407  6 -    135385 a------------t------------t---tca-------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388133  6 +   7955117 a------------t------------t---ttg-------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3681  6 +     11955 a------------t------------t---tca-------------------
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11312 12 -     16823 at--ccat----at------------t---tca-------------------
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241316  6 +   9596543 a------------t------------t---tta-------------------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73152 12 -     97402 at---cagt---at------------t---tca-------------------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44540  6 +    110728 a------------t------------t---tca-------------------
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64467 11 -     65777 a------------cttcat-------t---tta-------------------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760789  6 +  30322482 a------------t------------t---tca-------------------
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5447  6 -     13097 a------------t------------t---tca-------------------
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5201  6 +      5940 a------------t------------t---tca-------------------
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5024  6 -      5717 a------------t------------t---tca-------------------
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_1327670                    11410  6 -     11567 a------------t------------t---tca-------------------
i Leontopithecus_chrysomelas.k141_1327670                C 0 N 0
s Leontopithecus_rosalia.k141_349454                         12791  6 -     12945 a------------t------------t---tca-------------------
i Leontopithecus_rosalia.k141_349454                     C 0 N 0
s Lepilemur_ankaranensis.k141_567626                         10305  6 +     29618 a------------t------------t---tca-------------------
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10301  6 +     31569 a------------t------------t---tca-------------------
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10311  6 +     24756 a------------t------------t---tca-------------------
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10311  6 +     16388 a------------t------------t---tca-------------------
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814787  6 -   3914936 a------------t------------t---tca-------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342497 12 +    662738 atccgta------t------------t---tca-------------------
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335444  6 -   1826925 t------------t------------t---tca-------------------
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12600  6 +     19643 a------------t------------t---tca-------------------
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046270  6 -   6120653 a------------t------------t---tca-------------------
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086188  6 +  43346337 a------------c------------t---tct-------------------
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615823  6 +  59628241 a------------t------------t---tta-------------------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46833  6 -     61512 c------------t------------t---tca-------------------
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374495  6 -  60120075 c------------t------------t---tca-------------------
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26763  6 +     30207 c------------t------------t---tca-------------------
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1601  6 -      5035 c------------t------------t---tca-------------------
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26716  6 +     30527 c------------t------------t---tca-------------------
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37892  6 -     50087 c------------t------------t---tca-------------------
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47636  6 +     51645 c------------t------------t---tca-------------------
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416839  6 - 187317192 c------------t------------t---tca-------------------
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401069  6 +  25927173 c------------t------------t---tca-------------------
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50241  6 -     62418 c------------t------------t---tca-------------------
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2772  6 +     14901 c------------t------------t---tca-------------------
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46713  6 +     59329 c------------t------------t---tca-------------------
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272621  6 +    668171 c------------t------------t---tca-------------------
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1253  6 -      5049 c------------t------------t---tca-------------------
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4419  6 +     17132 c------------t------------t---tca-------------------
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224530 23 -    270270 atttttatttttatttcat-------t---tca-------------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323909  6 +  24302211 c------------t------------t---tca-------------------
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358740  6 -    752769 c------------t------------t---tca-------------------
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674829  6 -    737560 a------------t------------t---tca-------------------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222129  6 +    317179 a------------t------------t---tca-------------------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502347  6 +  40650429 a------------t------------t---ttg-------------------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151702  4 +    207569 --------------------------t---tca-------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27515  6 -     74585 a------------t------------t---tca-------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52096  6 -    140813 a------------t------------t---tca-------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88781 12 +     93471 at--ccat----at------------t---tca-------------------
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11569  6 +     17804 a------------t------------t---tca-------------------
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12069  6 -     12984 a------------t------------t---tca-------------------
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20388  6 -     26561 a------------t------------t---tca-------------------
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986143  6 +  93316391 a------------t------------t---tca-------------------
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47986  6 +    145209 a------------c------------t---ccc-------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186366 11 +    200668 a------------tttcat-------t---tta-------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965126  6 +  27267610 a------------t------------t---tca-------------------
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364523  2 -   8254450 a------------t--------------------------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 4
s Miniopterus_schreibersii.MinSch_scaffold_23309             43438 11 -     48117 a------------tttcat-------t---tta-------------------
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24009  6 -     27822 t------------t------------t---tca-------------------
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9798  6 +     27589 A------------T------------T---TCA-------------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53918  6 -     62432 a------------t------------t---tca-------------------
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360886 12 +    437263 A------TCCGTAT------------T---TCA-------------------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180611 11 +    366855 a------------tttcat-------t---tta-------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27227  6 -     82753 a------------t------------t---tca-------------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19818  6 -     63510 a------------t------------t---tca-------------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42471 11 +     47283 a------------tttcat-------t---tta-------------------
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596297  5 + 120012414 -------------t------------t---tca-------------------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689494  5 + 129401213 -------------t------------t---tca-------------------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217836  5 +  89631738 -------------t------------c---tca-------------------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498779  5 + 130317789 -------------t------------t---tca-------------------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85498  6 -     86153 a------------t------------t---tca-------------------
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 1 C 0
s Mustela_putorius.JH418006.1                             14356413  6 +  14710649 A------------T------------T---TCA-------------------
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64373  6 +     67721 a------------t------------t---tca-------------------
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794733 11 +  10118263 a------------tttcat-------t---tta-------------------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388908 11 +   6019432 a------------tttcat-------t---tta-------------------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384936 11 +   4330536 a------------tttcat-------t---tta-------------------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3721 11 +     18357 a------------tttcat-------t---tta-------------------
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121073  6 +    130748 a------------t------------t---tca-------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947993  6 +   3037898 a------------t------------t---tca-------------------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30731  6 +     34575 c------------t------------t---tca-------------------
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233552 12 -   7148211 atccgta------t------------t---tca-------------------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129215 18 -    149072 a------------tttcatttttcatt---tta-------------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55022  6 -    132029 a------------t------------t---tca-------------------
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11117  6 -     16345 a------------t------------t---tca-------------------
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17002  6 +     22201 a------------t------------t---tca-------------------
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415223  6 -  22158432 a------------t------------t---tca-------------------
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27400  6 -     54323 a------------t------------t---tca-------------------
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199419  6 +   9404916 a------------t------------t---tta-------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639493  6 + 196305487 a------------t------------t---tca-------------------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             2096  6 -      9413 a------------t------------t---tca-------------------
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566876  6 - 199412804 a------------t------------t---tca-------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558184  6 -   3988456 a------------t------------t---taa-------------------
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056463  6 -  11899542 a------------t------------t---tca-------------------
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453216  6 +   2017862 a------------t------------t---tca-------------------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         438314  6 -    630418 a------------t------------t---tca-------------------
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16198  6 +    150152 a------------t------------t---tca-------------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95797  6 -    140218 a------------t------------t---ttg-------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6343  6 -     41509 a------------c------------t---tca-------------------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103955 12 +  10937097 attttt-t-----t------------t---tca-------------------
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1258  6 +     11607 a------------t------------t---ttc-------------------
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40465  6 +    559221 a------------t------------t---tta-------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        42047  6 -     51505 a------------t------------t---tca-------------------
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             355052  6 +   1103335 a------------t------------t---tca-------------------
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405909  6 -  44047080 a------------t------------t---tca-------------------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6428  6 +     17875 a------------t------------t---tca-------------------
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_troglodytes.CM009242.2                               1474119 25 - 189151597 a------------t------------t---ttatcttgagaggtgacagcgt
i Pan_troglodytes.CM009242.2                             C 0 I 675
s Panthera_onca.PanOnc_flattened_line_3271                   25817  6 -    230217 a------------t------------t---tcc-------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463143  6 -  18783137 a------------t------------t---tcc-------------------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973802  6 +   8748460 a------------t------------t---tcc-------------------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617434  6 +   2937107 a------------t------------t---tca-------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244918  6 - 183742232 t------------t------------t---tca-------------------
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11203  6 +     21308 t------------t------------t---tca-------------------
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293946  6 -  20919399 t------------t------------t---tca-------------------
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23851  6 -     27687 c------------t------------t---tca-------------------
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     522  6 +     10553 t------------t------------t---tca-------------------
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   482  6 -     10386 t------------t------------t---tca-------------------
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16398  6 +     78924 a------------t------------t---tca-------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28379  6 +     31479 a------------t------------t---tca-------------------
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20747  6 -     24908 a------------t------------t---tca-------------------
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3199  6 +      9367 a------------t------------t---tca-------------------
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249563  4 +  18517816 --------------------------t---tca-------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33237  4 -     56120 --------------------------t---tca-------------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5480 12 -     63832 atccgta------t------------t---tca-------------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            4168  6 +     55023 c------------t------------t---tca-------------------
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3638  6 -     89929 c------------t------------t---tca-------------------
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4228  6 +     40849 c------------t------------t---tca-------------------
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255903  6 +  14605196 c------------t------------t---tca-------------------
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5304 11 +     22231 a------------tttcat-------t---tta-------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66082  6 +    207309 a------------t------------t---tca-------------------
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7170  6 -     25401 a------------t------------t---tca-------------------
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32918  6 +     58159 a------------t------------t---tca-------------------
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33194  6 +     63561 a------------t------------t---tca-------------------
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32954  6 +     51148 a------------t------------t---tca-------------------
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557924  6 -   4542175 a------------t------------t---tca-------------------
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32938  6 +     51125 a------------t------------t---tca-------------------
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2497 12 +     19503 A------TCAGTAT------------T---TCA-------------------
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9356  6 +     39866 a------------t------------t---tta-------------------
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4438  6 -      9282 a------------t------------t---tta-------------------
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43842  6 -     87950 a------------t------------t---tta-------------------
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44236  6 -     88961 a------------t------------t---tta-------------------
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8934  6 -     39403 a------------t------------t---tta-------------------
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43885  6 +     87928 a------------t------------t---tta-------------------
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8933  6 -     60166 a------------t------------t---tta-------------------
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15870  6 -     67232 a------------t------------t---tta-------------------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43786  6 -     90634 a------------t------------t---tta-------------------
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45253  6 +     89403 a------------t------------t---tta-------------------
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   179232 25 - 189387572 a------------t------------t---ttatcttgagaggtgacagcgt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      194049 25 -   9816681 a------------t------------t---ttatcTtgagaggtgacagcgt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_980496                                1031  6 -      1047 c------------t------------t---tca-------------------
i Presbytis_comata.k141_980496                           C 0 n 0
s Presbytis_mitrata.k141_584736                              46494  6 -     80239 c------------t------------t---tca-------------------
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5515  6 +      7663 a------------c------------t---tcc-------------------
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983937  6 +   4620579 a------------t------------t---tca-------------------
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567432  6 -   2598838 a------------t------------t---tca-------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5070  6 -      7103 a------------t------------t---tca-------------------
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5667  6 -     11706 a------------t------------t---tca-------------------
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9404  6 -     30655 a------------t------------t---tca-------------------
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35718  6 +     46564 a------------t------------t---tca-------------------
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       95997  6 -     98465 a------------t------------t---tca-------------------
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9636  6 +     35169 a------------t------------t---tca-------------------
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39621  6 +     52041 a------------t------------t---tca-------------------
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53504 11 -     66298 g------------tttcat-------t---ttg-------------------
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5993  6 -     18639 a------------t------------t---ttg-------------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842101 23 -  28871421 atttttatttttatttcat-------t---tca-------------------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538616 23 -   4952924 atttttatttttatttcat-------t---tca-------------------
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100457  6 +  38429054 a------------t------------t---tcc-------------------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28680  6 +     91421 c------------t------------t---tca-------------------
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155232  6 -   7812017 c------------t------------t---tca-------------------
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9537  6 +     72585 c------------t------------t---tca-------------------
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   359  6 -     55207 a------------t------------t---tca-------------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37024502  5 -  90668790 -------------t------------t---ttt-------------------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916068 10 +   3329780 -------------t--c-tt----att---tca-------------------
i Rhinolophus_sinicus.LVEH01000134.1                     I 1 C 0
s Rhinopithecus_bieti.k119_778604                             3199  6 +      7119 c------------t------------t---tca-------------------
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123814  6 + 195417433 c------------t------------t---tca-------------------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238041  6 -   7961872 c------------t------------t---tca-------------------
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76601 23 -    116970 atttttatttttatttcat-------t---tca-------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                311  6 -      1130 a------------t------------t---tca-------------------
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5213  6 +      6077 a------------t------------t---tca-------------------
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5307  6 +      5971 a------------t------------t---tca-------------------
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5224  6 +      5932 a------------t------------t---tca-------------------
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3569  6 -      4390 a------------t------------t---tca-------------------
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393326  6 - 209938924 a------------t------------t---tca-------------------
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5172  6 +      5979 a------------t------------t---tca-------------------
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1742  6 -     22275 a------------t------------t---tca-------------------
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9597  6 +     16473 a------------t------------t---tca-------------------
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110335  6 + 121099817 A------------T------------G---TCA-------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31902  6 -     47369 a------------t------------g---tca-------------------
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32288  6 -     79414 a------------t------------g---tca-------------------
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28979  6 -     34454 a------------t------------g---tca-------------------
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16380  6 -     22428 a------------t------------g---tca-------------------
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31534  6 -     47109 a------------t------------g---tca-------------------
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239586  6 +   5703754 a------------t------------t---tca-------------------
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9176  6 +     21866 a------------t------------t---tca-------------------
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26867  3 +     27374 c------------t------------t-------------------------
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30515  3 +     58920 c------------t------------t-------------------------
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17013  3 -     45317 c------------t------------t-------------------------
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24671  3 -     42441 c------------t------------t-------------------------
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27349  3 -     29113 C------------T------------T-------------------------
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30424  3 -     48123 c------------t------------t-------------------------
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51355  6 +     77746 a------------t------------t---tta-------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865465  6 -   1910179 a------------t------------t---tca-------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 C 0
s Sorex_araneus.JH798187.1                                 4672552  9 +  18376816 A------------T------------TAAAGCA-------------------
i Sorex_araneus.JH798187.1                               I 2 C 0
s Spermophilus_dauricus.KZ294078.1                         1869711  6 +   3870691 a------------t------------t---ttg-------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8068  6 -     97271 a------------t------------t---tca-------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126235  6 +    196729 a------------t------------t---tca-------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645272  6 +  69701581 a------------t------------t---tca-------------------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392488  6 +   1523678 a------------t------------t---tca-------------------
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15644 11 +     22964 a------------tttcat-------t---tta-------------------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4065  6 +      5583 a------------t------------t---tca-------------------
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192954 11 +    199430 a------------tttcat-------t---tcg-------------------
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106922 11 -    539355 a------------tttcat-------t---tcg-------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                2001  6 +      9917 a------------t------------t---tca-------------------
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8799  6 +     20590 a------------t------------t---tca-------------------
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354727  6 - 186847797 c------------t------------t---tca-------------------
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25390  4 -     33621 --------------------------t---tca-------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21021  6 -     31044 a------------g------------t---tca-------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481496 11 -    610378 a------------tttcat-------t---tga-------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22480  3 +     26378 c------------t------------t-------------------------
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35224  3 -     78344 c------------t------------t-------------------------
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21805  3 +     25722 c------------t------------t-------------------------
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30180  3 -     62838 c------------t------------t-------------------------
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30224  3 +     46913 c------------t------------t-------------------------
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10963  3 -     28527 c------------t------------t-------------------------
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32115  3 -     64340 c------------t------------t-------------------------
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30153  3 -     63452 c------------t------------t-------------------------
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11600  3 +     22490 c------------t------------t-------------------------
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5023  3 -      6147 c------------t------------t-------------------------
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11936  3 -     13050 c------------t------------t-------------------------
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257098  3 -   6242583 c------------t------------t-------------------------
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3194  3 +     19340 c------------t------------t-------------------------
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175210  6 -    200418 a------------t------------t---tta-------------------
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482883  1 -  10818551 a---------------------------------------------------
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836419  6 -   4065304 a------------t------------t---tca-------------------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10454  6 -     70247 a------------t------------t---taa-------------------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367080 12 -  33153633 atccgta------t------------t---tca-------------------
i Tursiops_truncatus.MRVK01000835.1                      I 6 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4863 10 -     21056 A--------TTTAT------------T---TCA-------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               I 2 C 0
s Ursus_maritimus.KK499267.1                                183436  6 +   5085361 a------------t------------t---tca-------------------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26590  6 -     30710 a------------t------------t---tca-------------------
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25497  6 -    147434 a------------t------------t---tca-------------------
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77611 11 +   5488506 atttt-------ct------------c---tca-------------------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106188  6 -    112863 a------------t------------t---tta-------------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175463  6 -    224448 a------------t------------t---ttg-------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30428  6 -     86975 a------------t------------t---tca-------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1266  6 -      1899 A------------T------------T---TTA-------------------
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955  0 +    313613 C
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Condylura_cristata.JH655891.1                           35808250  0 +  53390261 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       6800 338 +     36723 gctggcagccctcgcagccctggctcgctctctgtgcctcctcagccttggcgc--ccactctggccatgcttgaggagcccttcagcccgccgctgcactgtgggagcttctttctgggctggccaaggctggagccggctccctcagcttgcagggaggtgtggagggacagacacaggcgggaaccggggctgttcacggtgcttgagggccagcacgagttccc--ggtgggcgtgggctcggc-gagccccgcactcagagccaccagcct-gcccac-aagccccgggcagtg---ggcttagcacctgggccaccagctgctgtgctcgacttcttgctgg
s Gorilla_beringei.k141_3358147                               7109 341 -      8343 gctggcagcccttgcagccctggctcgctctctgtgcctcctcagccttggcac--ccactctggccacgcttgaggagcccttcagcccgccgctgcactgtgggagcctctttctgggctggccaaggccggagccggctccttcagcttgcagggaggtgtggagggagaggcgcaggcgggaaccggggctgttcacgggtcttgagggccagcgcgagttctg--ggtgggcgtgggctcggc-gggccccgcacggagagccgccagcct-gcccac-aagccccgggcagtgaggggcttagcacctgggccaccagctgctgtgctcaacttcttgctgg
i Gorilla_beringei.k141_3358147                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 72602 341 +  33314783 gctggcagcccttgcagccctggctcgctctctgtgcctcctcagccttggcgc--ccactctggccacgcttgaggagcccttctgcccgccgctgcactgtgggagcctctttctgggctggccaaggccagagccggctccctcagcttgcagggaggtgtggagggagaggcacaggcgggaaccggggctgttcacggtgcttgagggccagcgcgagttcca--ggtgggcgtgggctccgc-gggccccgcactcagagccgccagcct-gcccac-aagccccgggcagtgaggggcttagcacctgggccaccagctgctgtgctcgacttcttgctgg
i Gorilla_gorilla.LT578336.1                             I 52 I 332
s Pan_troglodytes.NBAG03003182.1                             13282 325 -     24457 gctggcagcccttgcagccCTGGCTCGCTCTCTGTGCCTCCtcagccttggcgc--ccactctgg-cacgcttgaggagcccttctgcccaccgctgcactgtgggagcctctttctgggctggccaaggccggagccggctccctcagcttgcagggaggtgtggagggagaggcgcaggcgggaaccggggctg-tcaCGGTGCTTgagggccagcgcgagttcca--ggtgggcgtgggctccgCNGGGCCCCGCACTCAGAGCCGCCAGCCT-GCCCAC-Aagccc-gggcagtgaggggcttagcacctgggccaccAGCTGCTGTGCT--------------
i Pan_troglodytes.NBAG03003182.1                         I 668 I 1548
s Pongo_abelii.CM009266.2                                   179257 339 - 189387572 gctggcagccctcgcagccctcactcgctctccgtgcctcctcagccttggtgc--ccactctggccatgcttgaggagcccttcagcccgccgctgcactgtgggagcccctttctgggctagCCAATGCCGGAGATGGccccctcagcttgcagggacatgtggagggagaggcgccagt-AGAACTGGGGCTGTGCATGGTGCTTGCTGGCCAGCAccagttccg--ggtgggcgtgggctcggc-ggg-cCTGCACTTGGAGCTGCTGGCCT-GCCCGc-aagccccgggcagtgaggggcttagcacctgggccagcagctgctgtgctcaacttcttgctgg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      194074 339 -   9816681 gctggcagccctcgcagccctcgctcgctctccgtgcctcctcagccttggtgc--ccactctggccacgcttgaggagcccttcagcccgccgctgcactgtgggagcccctttctgggctagccaatgccggagatggccccctcagcttgcagggacatgtggagggagaggcgccagt-ggaactggggctgtgcatggtgcttgctggccagcaccagttccg--ggtgggcgtgggctcggc-ggg-cctgcacttggagctgctggcct-gcccgc-aagccccgggcagtgaggggcttagcacctgggccagcagctgctgtgctcaacttcttgctgg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
e Fukomys_damarensis.KN121974.1                            2923238   0 -   3816255 C
e Myocastor_coypus.MyoCoy_scaffold_15261                     64379   0 +     67721 C
e Sorex_araneus.JH798187.1                                 4672561   0 +  18376816 C
e Erinaceus_europaeus.JH835339.1                           3667434   0 +   7059049 C
e Crocidura_indochinensis.CroInd_scaffold_77846              11054   0 +     12657 C
e Capromys_pilorides.CapPil_scaffold_762519                    791   0 -      1607 C
e Chinchilla_lanigera.JH722012.1                           1240021   0 -   2543920 C
e Nannospalax_galili.KL204047.1                             947999   0 +   3037898 C
e Saimiri_ustus.k141_360372                                  31540   0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16386   0 -     22428 C
e Saimiri_oerstedii.k141_245838                              28985   0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32294   0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       31908   0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110341   0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            29383   0 +     75252 C
e Chrysochloris_asiatica.ChrAsi_scaffold_4313612               102  23 +       302 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              25394   0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     33241   0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_89005        3205   0 +      9367 C
e Octodon_degus.JH651603.1                                11056469   0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73080   0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1933660   0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609   0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   6799   0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18951865   0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                   100094   0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   5594   0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  19862   0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       64209   0 -     66877 C
e Cavia_porcellus.DS562891.1                               5001130   0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4997688   0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    47992   0 +    145209 C
e Echinops_telfairi.JH980293.1                            62856819   0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_201229               1264   0 +     11607 C
e Elephantulus_edwardii.JH947257.1                         1227021   0 +  10337057 C
e Desmodus_rotundus.KZ672289.1                            11866587   0 -  20541912 C
e Pygathrix_nigripes_a.k141_215492                              9543   0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  155238   0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             28686   0 +     91421 C
e Callibella_humilis.k141_1233062                            11477   0 +     18648 C
e Perodicticus_potto.k141_1854441                            20753   0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          28385   0 +     31479 C
e Otolemur_garnettii.GL873799.1                             355058   0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        42053   0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566882   0 - 199412804 C
e Nycticebus_coucang.k141_1296080                             2102   0 -      9413 C
e Nycticebus_bengalensis.LG01                             93639499   0 + 196305487 C
e Loris_tardigradus.ctg83                                  5046276   0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                           12606   0 +     19643 C
e Galagoides_demidoff.k141_561628                            22522   0 -     32986 C
e Galago_senegalensis.k141_991736                            10439   0 +     22493 C
e Galago_moholi.ctg3793                                     126894   0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       21530   0 -     45910 C
e Allochrocebus_solatus.k141_3554717                         19752   0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         18067   0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            607670   0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_147047                  194   0 +     10270 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   21027   0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2111298   0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13931   0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1598   0 +      9923 C
e Tupaia_tana.TupTan_flattened_line_394                      10460   0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1836425   0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         30434   0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                106194   0 -    112863 C
e Ursus_maritimus.KK499267.1                                183442   0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              8074   0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          5999   0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        40471   0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1453222   0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                199425   0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589   0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356419   0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         9804   0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             27521   0 -     74585 C
e Lycaon_pictus.CM007581.1                                41615829   0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        814793   0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24917402   0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45108255   0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41616674   0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          223539   0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10196   0 -     23171 C
e CanFam4.chr16                                           42506560   0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6728   0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            216990   0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416665   0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_286923                      1272   0 -      1899 C
e Xerus_inauris.XerIna_scaffold_2302                        175469   0 -    224448 C
e Vicugna_pacos.KN270157.1                                   77622   0 +   5488506 C
e Varecia_variegata.k141_289850                              25503   0 -    147434 C
e Varecia_rubra.k141_787544                                  26596   0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    4873   0 -     21056 C
e Tursiops_truncatus.MRVK01000835.1                       17367092   0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6482884   0 -  10818551 C
e Tragulus_javanicus.TraJav_scaffold_3462                   175216   0 -    200418 C
e Trachypithecus_pileatus.k141_2622778                        3197   0 +     19340 C
e Trachypithecus_phayrei.ctg124                             257101   0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                        11939   0 -     13050 C
e Trachypithecus_melamera.k141_591572                         5026   0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                    11603   0 +     22490 C
e Trachypithecus_laotum.k141_928651                          30156   0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      32118   0 -     64340 C
e Trachypithecus_germaini.k141_57262                         10966   0 -     28527 C
e Trachypithecus_geei.k141_1001272                           30227   0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      30183   0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       21808   0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     35227   0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        22483   0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    481507   0 -    610378 C
e Theropithecus_gelada.CM009954.1                           354733   0 - 186847797 C
e Tarsius_wallacei.k141_226975                                8805   0 +     20590 C
e Tarsius_lariang.k141_1733899                                2007   0 +      9917 C
e Tapirus_terrestris.TapTer_scaffold_755                    106933   0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      192965   0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                4071   0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                15655   0 +     22964 C
e Symphalangus_syndactylus.tarseq_199                       392494   0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6645278   0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             126241   0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1869717   0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1865471   0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    51361   0 +     77746 C
e Semnopithecus_vetulus.k141_244474                          30427   0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     27352   0 -     29113 C
e Semnopithecus_priam.k141_714795                            24674   0 -     42441 C
e Semnopithecus_johnii.k141_843753                           17016   0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      30518   0 +     58920 C
e Semnopithecus_entellus.k141_158471                         26870   0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955   0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           9182   0 +     21866 C
e Sapajus_apella.ctg103                                     239592   0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        9603   0 +     16473 C
e Saguinus_oedipus.k141_1280589                               1748   0 -     22275 C
e Saguinus_mystax.k141_8077960                                5178   0 +      5979 C
e Saguinus_midas.LG03                                       393332   0 - 209938924 C
e Saguinus_labiatus.k141_2380921                              3575   0 -      4390 C
e Saguinus_inustus.k141_2469308                               5230   0 +      5932 C
e Saguinus_imperator.k141_1898058                             5313   0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             5219   0 +      6077 C
e Saguinus_bicolor.k141_2012906                                317   0 -      1130 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76624   0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             238047   0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104123820   0 + 195417433 C
e Rhinopithecus_bieti.k119_778604                             3205   0 +      7119 C
e Rhinolophus_sinicus.LVEH01000134.1                       2916078   0 +   3329780 C
e Rattus_norvegicus.chr16                                 37024507   0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   365   0 -     55207 C
e Puma_concolor.QAVW01001104.1                            18100463   0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3538639   0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5842124   0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            53515   0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            39627   0 +     52041 C
e Propithecus_verreauxi.k141_1047036                          9642   0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       96003   0 -     98465 C
e Propithecus_perrieri.k141_1496898                          35724   0 +     46564 C
e Propithecus_edwardsi.k141_635656                            9410   0 -     30655 C
e Propithecus_diadema.k141_153680                             5673   0 -     11706 C
e Propithecus_coronatus.k141_209299                           5076   0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1567438   0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1983943   0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5521   0 +      7663 C
e Presbytis_mitrata.k141_584736                              46500   0 -     80239 C
e Presbytis_comata.k141_980496                                1037   0 -      1047 I
e Plecturocebus_moloch.k141_1031110                          45259   0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          43792   0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      15876   0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          8939   0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          43891   0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          8940   0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44242   0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       43848   0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4444   0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9362   0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_83166            2509   0 +     19503 C
e Pithecia_vanzolinii.k141_1369553                           32944   0 +     51125 C
e Pithecia_pithecia.tarseq_165                              557930   0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           32960   0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33200   0 +     63561 C
e Pithecia_hirsuta.k141_640380                               32924   0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7176   0 -     25401 C
e Pithecia_albicans.k141_1239476                             66088   0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5315   0 +     22231 C
e Piliocolobus_tephrosceles.PDMG02000141.1                  255909   0 +  14605196 C
e Piliocolobus_kirkii.k141_1310104                            4234   0 +     40849 C
e Piliocolobus_gordonorum.k141_381342                         3644   0 -     89929 C
e Piliocolobus_badius.k141_2704958                            4174   0 +     55023 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               5492   0 -     63832 C
e Peromyscus_maniculatus.KI615324.1                         249567   0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16404   0 +     78924 C
e Papio_ursinus.k141_5784434                                   488   0 -     10386 C
e Papio_papio.k141_3538738                                     528   0 +     10553 C
e Papio_kindae.k141_2214839                                  23857   0 -     27687 C
e Papio_hamadryas.Contig39                                  293952   0 -  20919399 C
e Papio_cynocephalus.k141_1507553                            11209   0 +     21308 C
e Papio_anubis.CM001495.2                                   244924   0 - 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1617440   0 +   2937107 C
e Panthera_tigris.KE722367.1                               3973808   0 +   8748460 C
e Panthera_pardus.KV860321.1                              18463149   0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   25823   0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       6434   0 +     17875 C
e Ovis_aries.CM001607.2                                   26405915   0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8103967   0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    6349   0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95803   0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16204   0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         438320   0 -    630418 C
e Ochotona_princeps.JH802162.1                             2558190   0 -   3988456 C
e Nomascus_siki_a.k141_941534                                  27406   0 -     54323 C
e Nomascus_siki_b.tarseq_93                            8415229   0 -  22158432 C
e Nomascus_gabriellae.k141_57920                             17008   0 +     22201 C
e Nomascus_concolor.k141_735679                              11123   0 -     16345 C
e Nomascus_annamensis.k141_1771965                           55028   0 -    132029 C
e Noctilio_leporinus.NocLep_scaffold_7894                   129233   0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1233564   0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              30737   0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121079   0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_66571                         3732   0 +     18357 C
e Myotis_lucifugus.GL429869.1                               384947   0 +   4330536 C
e Myotis_davidii.KB100139.1                                4388919   0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9794744   0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             85504   0 -     86153 C
e Mus_spretus.CM004101.1                                  39498784   0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217841   0 +  89631738 C
e Mus_musculus.chr8                                       41689499   0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596302   0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42482   0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   19824   0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  27233   0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180622   0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   360898   0 +    437263 C
e Mirza_zaza.k141_766280                                     53924   0 -     62432 C
e Miopithecus_ogouensis.k141_1534655                         24015   0 -     27822 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             43449   0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6364525   4 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965132   0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186377   0 +    200668 C
e Microcebus_murinus.CM007674.1                           74986149   0 +  93316391 C
e Mico_schneideri.k141_1877700                                     20394   0 -     26561 C
e Mico_humeralifer.k141_1180625                              12075   0 -     12984 C
e Mico_argentatus.k141_582562                                11575   0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     88793   0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17431709   5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52102   0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151706   0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7502353   0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             222135   0 +    317179 C
e Manis_javanica.JSZB01003497.1                             674835   0 -    737560 C
e Mandrillus_sphinx.Contig270                               358746   0 -    752769 C
e Mandrillus_leucophaeus.scaffold280                        323915   0 +  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                224553   0 -    270270 C
e Macaca_tonkeana.k141_339739                                 4425   0 +     17132 C
e Macaca_thibetana.k99_45532                                  1259   0 -      5049 C
e Macaca_silenus.Contig273                                  272627   0 +    668171 C
e Macaca_siberu.k141_2185972                                 46719   0 +     59329 C
e Macaca_radiata.k141_2139468                                 2778   0 +     14901 C
e Macaca_nigra.k141_2818840                                  50247   0 -     62418 C
e Macaca_nemestrina.KQ007038.1                              401075   0 +  25927173 C
e Macaca_mulatta.NC_041758.1                                416845   0 - 187317192 C
e Macaca_maura.k141_1103459                                  47642   0 +     51645 C
e Macaca_leonina.k141_321385                                 37898   0 -     50087 C
e Macaca_fuscata.k119_546792                                 26722   0 +     30527 C
e Macaca_fascicularis.k141_1617581                            1607   0 -      5035 C
e Macaca_cyclopis.k119_263443                                26769   0 +     30207 C
e Macaca_assamensis.Contig5                                 374501   0 -  60120075 C
e Macaca_arctoides.k141_1757516                              46839   0 -     61512 C
e Loxodonta_africana.GL010049.1                           39086194   0 +  43346337 C
e Lophocebus_aterrimus.ctg367                               335450   0 -   1826925 C
e Lipotes_vexillifer.KE559953.1                             342509   0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                      10317   0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                         10317   0 +     24756 C
e Lepilemur_dorsalis.k141_387009                             10307   0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                         10311   0 +     29618 C
e Leontocebus_nigricollis.k141_3905062                        5030   0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           5207   0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        5453   0 -     13097 C
e Lemur_catta.scaffold_24                                 14760795   0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    64478   0 -     65777 C
e Lagothrix_lagothricha.k141_246028                          44546   0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 73164   0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1241322   0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11324   0 -     16823 C
e Indri_indri.k141_2415743                                    3687   0 +     11955 C
e Ictidomys_tridecemlineatus.JH393364.1                     388139   0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       8413   0 -    135385 C
e Hylobates_pileatus_a.tarseq_633                            7802804   0 +  11177569 C
e Hylobates_pileatus_b.LG02                                       2053926   0 + 191637585 C
e Hylobates_klossii.k141_738755                              14326   0 +     55766 C
e Hylobates_agilis.k141_1155965                               7142   0 +     12352 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71463   0 +     83186 C
e Hoolock_leuconedys.ctg274                                    144097   0 -    630532 C
e Hipposideros_galeritus.HipGal_scaffold_164997               2365   0 -      2730 C
e Hipposideros_armiger.JXIK01000431.1                      1552928   0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                8931   0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1530   0 +      8654 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10788   0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                32090   0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         18141   0 -     53142 C
e Hapalemur_meridionalis.k141_258450                         11139   0 -     42923 C
e Hapalemur_griseus.k141_763500                              62268   0 -     66874 C
e Hapalemur_gilberti.k141_646465                             37397   0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          15998   0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_10447                    3666   0 -     78134 C
e Glis_glis.GliGli_scaffold_163929                            2600   0 -      6791 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93122   0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_51812                2452   0 -     28519 C
e Felis_nigripes.FelNig_flattened_line_31944                 29000   0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185117900   0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              60314   0 -    111500 C
e Eulemur_rufus.k141_514691                                  43911   0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            6191   0 +     30972 C
e Eulemur_mongoz.k141_232305                                 49467   0 -     97555 C
e Eulemur_macaco.k141_1562045                                25273   0 -     75513 C
e Eulemur_fulvus.k141_636316                                 54640   0 -     65740 C
e Eulemur_flavifrons.k141_433119                             44316   0 +     68309 C
e Eulemur_coronatus.k141_384460                              87753   0 +    112731 C
e Eulemur_collaris.k141_601111                               43783   0 -     70999 C
e Eulemur_albifrons.k141_51491                               16073   0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_57114               142   0 +     25849 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           72429   0 -    133382 C
e Erythrocebus_patas.Contig38                               264523   0 +  21539334 C
e Equus_przewalskii.KK951119.1                              412638   0 -    498745 C
e Equus_caballus.CM000403.2                               21376656   0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3042718   0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12580180   0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           15683   0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33676   0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241405   0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               7571   0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  140573   0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665773   0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18633221   0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        293857   0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    646696   0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5657   0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213117830   0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46140   0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4084   0 -      8242 C
e Condylura_cristata.JH655891.1                           35808250   0 +  53390261 C
e Colobus_polykomos.k141_906115                               4224   0 -     84244 C
e Colobus_guereza.LG01                                      380667   0 - 200372422 C
e Colobus_angolensis.KN981557.1                             410786   0 -   2368649 C
e Chlorocebus_sabaeus.CM001947.1                            306378   0 - 135778131 C
e Chlorocebus_pygerythrus.k141_3063162                       11526   0 -     44032 C
e Chlorocebus_aethiops.ctg25                                344987   0 +  18827391 C
e Chiropotes_sagulatus.k141_1113111                           9271   0 +     34062 C
e Chiropotes_israelita.k141_313004                           43720   0 -    112038 C
e Chiropotes_albinasus.k141_2628359                            317   0 +      1057 C
e Cheracebus_torquatus.k141_890198                           20654   0 +     39636 C
e Cheracebus_regulus.k141_471822                             20865   0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20610   0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10197   0 -     32913 C
e Cheirogaleus_medius.k141_759766                             6454   0 -     15404 C
e Cheirogaleus_major.k141_666340                             31940   0 -     33796 C
e Cercopithecus_roloway.k141_3012935                         24086   0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           27125   0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         4729   0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       28567   0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        33663   0 -     45857 C
e Cercopithecus_mona.ctg39                                  271298   0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  365571   0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                           12984   0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          29204   0 -     34525 C
e Cercopithecus_diana.k141_132293                            13472   0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           8363   0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        28399   0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          46121   0 -    148725 C
e Cercocebus_lunulatus.k141_2500334                           1737   0 -     14410 C
e Cercocebus_chrysogaster.k141_1522556                       46304   0 +     47900 C
e Cercocebus_atys.KQ010504.1                                142565   0 -   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20334   0 +     27315 C
e Cephalopachus_bancanus.k141_1689090                         3742   0 -      5494 C
e Cebus_unicolor.k141_1654760                                68368   0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9272   0 -     34880 C
e Cebus_albifrons.Contig27                                  374218   0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44450   0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6392   0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     80881   0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    28954   0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           271781   0 +    496798 C
e Capra_hircus.CM004588.1                                 26593051   0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27410777   0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1210231   0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4666573   0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7632286   0 +  17673402 C
e Callithrix_kuhlii.k119_102356                               2994   0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455471   0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3079   0 -      8861 C
e Callimico_goeldii.k141_1609886                             10993   0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         21822   0 +    119600 C
e Cacajao_hosomi.k141_81245                                  21909   0 +     95584 C
e Cacajao_calvus.k141_89051                                  44383   0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9089   0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1531689   0 -   4408762 C
e Bos_taurus.CM000203.6                                   27546681   0 -  45695690 C
e Bos_mutus.JH880303.1                                      756539   0 +   1948126 C
e Bos_indicus.CM003047.1                                  20357975   0 +  48749331 C
e Bison_bison.KN261452.1                                     23585   0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     88054   0 +    124022 C
e Balaenoptera_bonaerensis.DF411050.1                         1315   0 -     25979 C
e Balaenoptera_acutorostrata.KI537508.1                    7964815   0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               7552   0 -     19611 C
e Avahi_laniger.k141_2756659                                  7544   0 +     11645 C
e Ateles_paniscus.k141_866194                                24280   0 -     33135 C
e Ateles_marginatus.k141_970259                              50222   0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              34852   0 +     44353 C
e Ateles_chamek.k141_615173                                   7297   0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12162   0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               275995   0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      17471   0 -     32367 C
e Aotus_vociferans.k141_1514463                               2957   0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3398   0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673404   0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3122   0 -     15923 C
e Aotus_azarae.k141_887050                                    2497   0 +     17741 C
e Antilocapra_americana.AntAmePen_scaffold_21030             52125   0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178470   0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1587048   0 +   2318259 C
e Alouatta_seniculus.k141_928287                             34239   0 +     42133 C
e Alouatta_puruensis.k141_251022                             10105   0 +     30854 C
e Alouatta_palliata.k141_638677                              47932   0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42283   0 +     45454 C
e Alouatta_macconnelli.k141_1277969                            765   0 -      3959 C
e Alouatta_juara.k141_1687208                                43658   0 -     64179 C
e Alouatta_discolor.k141_2561099                             45208   0 +     55831 C
e Alouatta_caraya.k141_1109140                               45769   0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73530   0 -     84148 C
e Allochrocebus_lhoesti.k141_3412094                          1516   0 +     13857 C
e Allenopithecus_nigroviridis.k141_3755588                   49485   0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    19841   0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27463   0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814204   0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       7138 336 +     36723 gccttagctgcctccggcaggg--cagggcttgggacctgcag-cccaccatg-cctgagcctgcctc--ccccgccgcacccccacatgggctcctgt-gcagcccgagcc-tccccgacaaggggcgctccctgctccagggctgtgcctagtcccatcgacc-gcccaagggctgaggagtgcggg-ctcatagtgcggaagtggcgggcagctccacctgcggccct-ggtgcaggatcca-ctgggtgaagccagctgtgctcctg-agtctggtgggg-acttggag-aatcttt-atgtctagctaagtgattgtaaatacaccaatcagcactctgtatctagc
s Gorilla_beringei.k141_3358147                               7450 335 -      8343 gccttagctgcctctggcaggg--cagggcttgggacctgcag-cccaccatg-cctgagcctgcctc--ccccgccccacccccccatgggctcctgt-gcag-ccgagcc-tccccgacaaggggcgctccctgctccagggctgtgcctagtcccatcgacc-gcccaagggctgaggagtgcggg-cgcatagtgcggaactggcgggcagctccacctgcagccct-ggtgcaggatcca-ctgggtgaagccagctgtgctcctg-agtctggtgggg-acttggag-aatcttt-atgtctagctaagtgattgtaaatacaccaatcggcactctgtatctagc
i Gorilla_beringei.k141_3358147                          C 0 N 0
s Gorilla_gorilla.LT578341.1                                256455 333 - 186649187 gccttagctgcctc-ggcaggg--cagggcttgggacctgcag-cccaccatg-cctgagcctgcctc--ccccgccccacccccccatgggctcctgt-gcag-ctgagcc-tccccgacaaggggcgctccctgctccagggctgtgcctagtcccatcgacc-gcccaagggctgaggagtgcggg-cgcatagtgcggaactggcgggcagctccacctgcagccct-ggtgcaggatcca-ctgggtgaagctagctgtgctcctg-agtctggt-ggg-acttggat-aatcttt-atgtctagctaagtgattgtaaatacaccaatcagcactctctatctagc
i Gorilla_gorilla.LT578341.1                             I 339 I 849
s Pan_troglodytes.KZ622849.1                                 35177 335 -    110857 gccttagctgcctccggcaggg--cagggcttgggacctgcag-cccaccatg-cctgagcctgcctc--ctcc-cccaacccccccatgggctcctgt-gcggcctgaGCC-TCCCAGACAAGGGGCGCTCCCTGCTCCAGAGCTGTGCCTAGTCCCATctacc-gcccaagggctgaggagtgcggt-cGCATAGTGCGGAACTggtgggcagctccacctgcggccct-ggtgcaggatcca-ctgggtgaagccagctgtgCACCTG-AGTCTGGTGGga-acttggag-aatcttt-atgtctagctaagtgattgtaaatacaccaatcagcactctgtatctagc
i Pan_troglodytes.KZ622849.1                             I 578 I 654
s Pongo_abelii.CM009266.2                                   179596 338 - 189387572 gccttagctgcctcccgcaggg--cagggcttgggacctgcag-cccaccatg-cctgagcctgcCTCTTCCCCGCCTCCCTCCACCGTGGGCTCCTGT-GTGACCTGAGCC-TCCCTGACAAGGGGCGCTCCCTGCTCCAGGGctgtgcccagtcccatcgacc-gcccaagggctgaggagtgtggg-cgcacAGTGCagaactggcaggcagctccacctgcagcccc-cgtgccggatcca-ctgggtgaagccagctgtgCTCCtt-agtctggtgggg-acttggag-aatcttt-atgtctagctaagggattgtaaatataccaatcagcactctgtatctagc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      194413 338 -   9816681 gccttagctgcctcccgcaggg--cagggcttgggacctgcag-cccaccatg-cctgagcctgcctcttccccgcctccctccaccgtgggctcctgt-gtgacctgagcc-tccctgacaaggggcgctccctgctccagggctgtgcccagtcccatcgacc-gcccaagggctgaggagtgcggg-cgcacagtgcagaactggcaggcagctccacctgcagcccc-cgtgccggatcca-ctgggtgaagccagctgtgctcctt-agtctggtgggg-acttggag-aatcttt-atgtctagctaagggattgtaaatataccaatcagcactctgtatctagc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
e Fukomys_damarensis.KN121974.1                            2923238   0 -   3816255 C
e Myocastor_coypus.MyoCoy_scaffold_15261                     64379   0 +     67721 C
e Sorex_araneus.JH798187.1                                 4672561   0 +  18376816 C
e Erinaceus_europaeus.JH835339.1                           3667434   0 +   7059049 C
e Crocidura_indochinensis.CroInd_scaffold_77846              11054   0 +     12657 C
e Capromys_pilorides.CapPil_scaffold_762519                    791   0 -      1607 C
e Chinchilla_lanigera.JH722012.1                           1240021   0 -   2543920 C
e Nannospalax_galili.KL204047.1                             947999   0 +   3037898 C
e Saimiri_ustus.k141_360372                                  31540   0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16386   0 -     22428 C
e Saimiri_oerstedii.k141_245838                              28985   0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32294   0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       31908   0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110341   0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            29383   0 +     75252 C
e Chrysochloris_asiatica.ChrAsi_scaffold_4313612               102  23 +       302 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              25394   0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     33241   0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_89005        3205   0 +      9367 C
e Octodon_degus.JH651603.1                                11056469   0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73080   0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1933660   0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609   0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   6799   0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18951865   0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                   100094   0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   5594   0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  19862   0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       64209   0 -     66877 C
e Cavia_porcellus.DS562891.1                               5001130   0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4997688   0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    47992   0 +    145209 C
e Echinops_telfairi.JH980293.1                            62856819   0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_201229               1264   0 +     11607 C
e Elephantulus_edwardii.JH947257.1                         1227021   0 +  10337057 C
e Desmodus_rotundus.KZ672289.1                            11866587   0 -  20541912 C
e Pygathrix_nigripes_a.k141_215492                              9543   0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  155238   0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             28686   0 +     91421 C
e Callibella_humilis.k141_1233062                            11477   0 +     18648 C
e Perodicticus_potto.k141_1854441                            20753   0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          28385   0 +     31479 C
e Otolemur_garnettii.GL873799.1                             355058   0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        42053   0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566882   0 - 199412804 C
e Nycticebus_coucang.k141_1296080                             2102   0 -      9413 C
e Nycticebus_bengalensis.LG01                             93639499   0 + 196305487 C
e Loris_tardigradus.ctg83                                  5046276   0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                           12606   0 +     19643 C
e Galagoides_demidoff.k141_561628                            22522   0 -     32986 C
e Galago_senegalensis.k141_991736                            10439   0 +     22493 C
e Galago_moholi.ctg3793                                     126894   0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       21530   0 -     45910 C
e Allochrocebus_solatus.k141_3554717                         19752   0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         18067   0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            607670   0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_147047                  194   0 +     10270 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   21027   0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2111298   0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13931   0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1598   0 +      9923 C
e Tupaia_tana.TupTan_flattened_line_394                      10460   0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1836425   0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         30434   0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                106194   0 -    112863 C
e Ursus_maritimus.KK499267.1                                183442   0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              8074   0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          5999   0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        40471   0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1453222   0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                199425   0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589   0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356419   0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         9804   0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             27521   0 -     74585 C
e Lycaon_pictus.CM007581.1                                41615829   0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        814793   0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24917402   0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45108255   0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41616674   0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          223539   0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10196   0 -     23171 C
e CanFam4.chr16                                           42506560   0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6728   0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            216990   0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416665   0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_286923                      1272   0 -      1899 C
e Xerus_inauris.XerIna_scaffold_2302                        175469   0 -    224448 C
e Vicugna_pacos.KN270157.1                                   77622   0 +   5488506 C
e Varecia_variegata.k141_289850                              25503   0 -    147434 C
e Varecia_rubra.k141_787544                                  26596   0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    4873   0 -     21056 C
e Tursiops_truncatus.MRVK01000835.1                       17367092   0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6482884   0 -  10818551 C
e Tragulus_javanicus.TraJav_scaffold_3462                   175216   0 -    200418 C
e Trachypithecus_pileatus.k141_2622778                        3197   0 +     19340 C
e Trachypithecus_phayrei.ctg124                             257101   0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                        11939   0 -     13050 C
e Trachypithecus_melamera.k141_591572                         5026   0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                    11603   0 +     22490 C
e Trachypithecus_laotum.k141_928651                          30156   0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      32118   0 -     64340 C
e Trachypithecus_germaini.k141_57262                         10966   0 -     28527 C
e Trachypithecus_geei.k141_1001272                           30227   0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      30183   0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       21808   0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     35227   0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        22483   0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    481507   0 -    610378 C
e Theropithecus_gelada.CM009954.1                           354733   0 - 186847797 C
e Tarsius_wallacei.k141_226975                                8805   0 +     20590 C
e Tarsius_lariang.k141_1733899                                2007   0 +      9917 C
e Tapirus_terrestris.TapTer_scaffold_755                    106933   0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      192965   0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                4071   0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                15655   0 +     22964 C
e Symphalangus_syndactylus.tarseq_199                       392494   0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6645278   0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             126241   0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1869717   0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1865471   0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    51361   0 +     77746 C
e Semnopithecus_vetulus.k141_244474                          30427   0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     27352   0 -     29113 C
e Semnopithecus_priam.k141_714795                            24674   0 -     42441 C
e Semnopithecus_johnii.k141_843753                           17016   0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      30518   0 +     58920 C
e Semnopithecus_entellus.k141_158471                         26870   0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955   0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           9182   0 +     21866 C
e Sapajus_apella.ctg103                                     239592   0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        9603   0 +     16473 C
e Saguinus_oedipus.k141_1280589                               1748   0 -     22275 C
e Saguinus_mystax.k141_8077960                                5178   0 +      5979 C
e Saguinus_midas.LG03                                       393332   0 - 209938924 C
e Saguinus_labiatus.k141_2380921                              3575   0 -      4390 C
e Saguinus_inustus.k141_2469308                               5230   0 +      5932 C
e Saguinus_imperator.k141_1898058                             5313   0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             5219   0 +      6077 C
e Saguinus_bicolor.k141_2012906                                317   0 -      1130 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76624   0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             238047   0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104123820   0 + 195417433 C
e Rhinopithecus_bieti.k119_778604                             3205   0 +      7119 C
e Rhinolophus_sinicus.LVEH01000134.1                       2916078   0 +   3329780 C
e Rattus_norvegicus.chr16                                 37024507   0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   365   0 -     55207 C
e Puma_concolor.QAVW01001104.1                            18100463   0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3538639   0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5842124   0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            53515   0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            39627   0 +     52041 C
e Propithecus_verreauxi.k141_1047036                          9642   0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       96003   0 -     98465 C
e Propithecus_perrieri.k141_1496898                          35724   0 +     46564 C
e Propithecus_edwardsi.k141_635656                            9410   0 -     30655 C
e Propithecus_diadema.k141_153680                             5673   0 -     11706 C
e Propithecus_coronatus.k141_209299                           5076   0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1567438   0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1983943   0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5521   0 +      7663 C
e Presbytis_mitrata.k141_584736                              46500   0 -     80239 C
e Presbytis_comata.k141_980496                                1037   0 -      1047 I
e Plecturocebus_moloch.k141_1031110                          45259   0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          43792   0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      15876   0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          8939   0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          43891   0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          8940   0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44242   0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       43848   0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4444   0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9362   0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_83166            2509   0 +     19503 C
e Pithecia_vanzolinii.k141_1369553                           32944   0 +     51125 C
e Pithecia_pithecia.tarseq_165                              557930   0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           32960   0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33200   0 +     63561 C
e Pithecia_hirsuta.k141_640380                               32924   0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7176   0 -     25401 C
e Pithecia_albicans.k141_1239476                             66088   0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5315   0 +     22231 C
e Piliocolobus_tephrosceles.PDMG02000141.1                  255909   0 +  14605196 C
e Piliocolobus_kirkii.k141_1310104                            4234   0 +     40849 C
e Piliocolobus_gordonorum.k141_381342                         3644   0 -     89929 C
e Piliocolobus_badius.k141_2704958                            4174   0 +     55023 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               5492   0 -     63832 C
e Peromyscus_maniculatus.KI615324.1                         249567   0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16404   0 +     78924 C
e Papio_ursinus.k141_5784434                                   488   0 -     10386 C
e Papio_papio.k141_3538738                                     528   0 +     10553 C
e Papio_kindae.k141_2214839                                  23857   0 -     27687 C
e Papio_hamadryas.Contig39                                  293952   0 -  20919399 C
e Papio_cynocephalus.k141_1507553                            11209   0 +     21308 C
e Papio_anubis.CM001495.2                                   244924   0 - 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1617440   0 +   2937107 C
e Panthera_tigris.KE722367.1                               3973808   0 +   8748460 C
e Panthera_pardus.KV860321.1                              18463149   0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   25823   0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       6434   0 +     17875 C
e Ovis_aries.CM001607.2                                   26405915   0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8103967   0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    6349   0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95803   0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16204   0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         438320   0 -    630418 C
e Ochotona_princeps.JH802162.1                             2558190   0 -   3988456 C
e Nomascus_siki_a.k141_941534                                  27406   0 -     54323 C
e Nomascus_siki_b.tarseq_93                            8415229   0 -  22158432 C
e Nomascus_gabriellae.k141_57920                             17008   0 +     22201 C
e Nomascus_concolor.k141_735679                              11123   0 -     16345 C
e Nomascus_annamensis.k141_1771965                           55028   0 -    132029 C
e Noctilio_leporinus.NocLep_scaffold_7894                   129233   0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1233564   0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              30737   0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121079   0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_66571                         3732   0 +     18357 C
e Myotis_lucifugus.GL429869.1                               384947   0 +   4330536 C
e Myotis_davidii.KB100139.1                                4388919   0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9794744   0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             85504   0 -     86153 C
e Mus_spretus.CM004101.1                                  39498784   0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217841   0 +  89631738 C
e Mus_musculus.chr8                                       41689499   0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596302   0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42482   0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   19824   0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  27233   0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180622   0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   360898   0 +    437263 C
e Mirza_zaza.k141_766280                                     53924   0 -     62432 C
e Miopithecus_ogouensis.k141_1534655                         24015   0 -     27822 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             43449   0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6364525   4 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965132   0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186377   0 +    200668 C
e Microcebus_murinus.CM007674.1                           74986149   0 +  93316391 C
e Mico_schneideri.k141_1877700                                     20394   0 -     26561 C
e Mico_humeralifer.k141_1180625                              12075   0 -     12984 C
e Mico_argentatus.k141_582562                                11575   0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     88793   0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17431709   5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52102   0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151706   0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7502353   0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             222135   0 +    317179 C
e Manis_javanica.JSZB01003497.1                             674835   0 -    737560 C
e Mandrillus_sphinx.Contig270                               358746   0 -    752769 C
e Mandrillus_leucophaeus.scaffold280                        323915   0 +  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                224553   0 -    270270 C
e Macaca_tonkeana.k141_339739                                 4425   0 +     17132 C
e Macaca_thibetana.k99_45532                                  1259   0 -      5049 C
e Macaca_silenus.Contig273                                  272627   0 +    668171 C
e Macaca_siberu.k141_2185972                                 46719   0 +     59329 C
e Macaca_radiata.k141_2139468                                 2778   0 +     14901 C
e Macaca_nigra.k141_2818840                                  50247   0 -     62418 C
e Macaca_nemestrina.KQ007038.1                              401075   0 +  25927173 C
e Macaca_mulatta.NC_041758.1                                416845   0 - 187317192 C
e Macaca_maura.k141_1103459                                  47642   0 +     51645 C
e Macaca_leonina.k141_321385                                 37898   0 -     50087 C
e Macaca_fuscata.k119_546792                                 26722   0 +     30527 C
e Macaca_fascicularis.k141_1617581                            1607   0 -      5035 C
e Macaca_cyclopis.k119_263443                                26769   0 +     30207 C
e Macaca_assamensis.Contig5                                 374501   0 -  60120075 C
e Macaca_arctoides.k141_1757516                              46839   0 -     61512 C
e Loxodonta_africana.GL010049.1                           39086194   0 +  43346337 C
e Lophocebus_aterrimus.ctg367                               335450   0 -   1826925 C
e Lipotes_vexillifer.KE559953.1                             342509   0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                      10317   0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                         10317   0 +     24756 C
e Lepilemur_dorsalis.k141_387009                             10307   0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                         10311   0 +     29618 C
e Leontocebus_nigricollis.k141_3905062                        5030   0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           5207   0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        5453   0 -     13097 C
e Lemur_catta.scaffold_24                                 14760795   0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    64478   0 -     65777 C
e Lagothrix_lagothricha.k141_246028                          44546   0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 73164   0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1241322   0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11324   0 -     16823 C
e Indri_indri.k141_2415743                                    3687   0 +     11955 C
e Ictidomys_tridecemlineatus.JH393364.1                     388139   0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       8413   0 -    135385 C
e Hylobates_pileatus_a.tarseq_633                            7802804   0 +  11177569 C
e Hylobates_pileatus_b.LG02                                       2053926   0 + 191637585 C
e Hylobates_klossii.k141_738755                              14326   0 +     55766 C
e Hylobates_agilis.k141_1155965                               7142   0 +     12352 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71463   0 +     83186 C
e Hoolock_leuconedys.ctg274                                    144097   0 -    630532 C
e Hipposideros_galeritus.HipGal_scaffold_164997               2365   0 -      2730 C
e Hipposideros_armiger.JXIK01000431.1                      1552928   0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                8931   0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1530   0 +      8654 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10788   0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                32090   0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         18141   0 -     53142 C
e Hapalemur_meridionalis.k141_258450                         11139   0 -     42923 C
e Hapalemur_griseus.k141_763500                              62268   0 -     66874 C
e Hapalemur_gilberti.k141_646465                             37397   0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          15998   0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_10447                    3666   0 -     78134 C
e Glis_glis.GliGli_scaffold_163929                            2600   0 -      6791 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93122   0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_51812                2452   0 -     28519 C
e Felis_nigripes.FelNig_flattened_line_31944                 29000   0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185117900   0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              60314   0 -    111500 C
e Eulemur_rufus.k141_514691                                  43911   0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            6191   0 +     30972 C
e Eulemur_mongoz.k141_232305                                 49467   0 -     97555 C
e Eulemur_macaco.k141_1562045                                25273   0 -     75513 C
e Eulemur_fulvus.k141_636316                                 54640   0 -     65740 C
e Eulemur_flavifrons.k141_433119                             44316   0 +     68309 C
e Eulemur_coronatus.k141_384460                              87753   0 +    112731 C
e Eulemur_collaris.k141_601111                               43783   0 -     70999 C
e Eulemur_albifrons.k141_51491                               16073   0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_57114               142   0 +     25849 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           72429   0 -    133382 C
e Erythrocebus_patas.Contig38                               264523   0 +  21539334 C
e Equus_przewalskii.KK951119.1                              412638   0 -    498745 C
e Equus_caballus.CM000403.2                               21376656   0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3042718   0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12580180   0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           15683   0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33676   0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241405   0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               7571   0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  140573   0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665773   0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18633221   0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        293857   0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    646696   0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5657   0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213117830   0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46140   0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4084   0 -      8242 C
e Condylura_cristata.JH655891.1                           35808250   0 +  53390261 C
e Colobus_polykomos.k141_906115                               4224   0 -     84244 C
e Colobus_guereza.LG01                                      380667   0 - 200372422 C
e Colobus_angolensis.KN981557.1                             410786   0 -   2368649 C
e Chlorocebus_sabaeus.CM001947.1                            306378   0 - 135778131 C
e Chlorocebus_pygerythrus.k141_3063162                       11526   0 -     44032 C
e Chlorocebus_aethiops.ctg25                                344987   0 +  18827391 C
e Chiropotes_sagulatus.k141_1113111                           9271   0 +     34062 C
e Chiropotes_israelita.k141_313004                           43720   0 -    112038 C
e Chiropotes_albinasus.k141_2628359                            317   0 +      1057 C
e Cheracebus_torquatus.k141_890198                           20654   0 +     39636 C
e Cheracebus_regulus.k141_471822                             20865   0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20610   0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10197   0 -     32913 C
e Cheirogaleus_medius.k141_759766                             6454   0 -     15404 C
e Cheirogaleus_major.k141_666340                             31940   0 -     33796 C
e Cercopithecus_roloway.k141_3012935                         24086   0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           27125   0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         4729   0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       28567   0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        33663   0 -     45857 C
e Cercopithecus_mona.ctg39                                  271298   0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  365571   0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                           12984   0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          29204   0 -     34525 C
e Cercopithecus_diana.k141_132293                            13472   0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           8363   0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        28399   0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          46121   0 -    148725 C
e Cercocebus_lunulatus.k141_2500334                           1737   0 -     14410 C
e Cercocebus_chrysogaster.k141_1522556                       46304   0 +     47900 C
e Cercocebus_atys.KQ010504.1                                142565   0 -   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20334   0 +     27315 C
e Cephalopachus_bancanus.k141_1689090                         3742   0 -      5494 C
e Cebus_unicolor.k141_1654760                                68368   0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9272   0 -     34880 C
e Cebus_albifrons.Contig27                                  374218   0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44450   0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6392   0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     80881   0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    28954   0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           271781   0 +    496798 C
e Capra_hircus.CM004588.1                                 26593051   0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27410777   0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1210231   0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4666573   0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7632286   0 +  17673402 C
e Callithrix_kuhlii.k119_102356                               2994   0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455471   0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3079   0 -      8861 C
e Callimico_goeldii.k141_1609886                             10993   0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         21822   0 +    119600 C
e Cacajao_hosomi.k141_81245                                  21909   0 +     95584 C
e Cacajao_calvus.k141_89051                                  44383   0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9089   0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1531689   0 -   4408762 C
e Bos_taurus.CM000203.6                                   27546681   0 -  45695690 C
e Bos_mutus.JH880303.1                                      756539   0 +   1948126 C
e Bos_indicus.CM003047.1                                  20357975   0 +  48749331 C
e Bison_bison.KN261452.1                                     23585   0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     88054   0 +    124022 C
e Balaenoptera_bonaerensis.DF411050.1                         1315   0 -     25979 C
e Balaenoptera_acutorostrata.KI537508.1                    7964815   0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               7552   0 -     19611 C
e Avahi_laniger.k141_2756659                                  7544   0 +     11645 C
e Ateles_paniscus.k141_866194                                24280   0 -     33135 C
e Ateles_marginatus.k141_970259                              50222   0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              34852   0 +     44353 C
e Ateles_chamek.k141_615173                                   7297   0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12162   0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               275995   0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      17471   0 -     32367 C
e Aotus_vociferans.k141_1514463                               2957   0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3398   0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673404   0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3122   0 -     15923 C
e Aotus_azarae.k141_887050                                    2497   0 +     17741 C
e Antilocapra_americana.AntAmePen_scaffold_21030             52125   0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178470   0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1587048   0 +   2318259 C
e Alouatta_seniculus.k141_928287                             34239   0 +     42133 C
e Alouatta_puruensis.k141_251022                             10105   0 +     30854 C
e Alouatta_palliata.k141_638677                              47932   0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42283   0 +     45454 C
e Alouatta_macconnelli.k141_1277969                            765   0 -      3959 C
e Alouatta_juara.k141_1687208                                43658   0 -     64179 C
e Alouatta_discolor.k141_2561099                             45208   0 +     55831 C
e Alouatta_caraya.k141_1109140                               45769   0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73530   0 -     84148 C
e Allochrocebus_lhoesti.k141_3412094                          1516   0 +     13857 C
e Allenopithecus_nigroviridis.k141_3755588                   49485   0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    19841   0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27463   0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814204   0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       7474 652 +     36723  
s Gorilla_beringei.k141_420802                                   5 455 -      1361  
i Gorilla_beringei.k141_420802                           N 0 I 102
s Gorilla_gorilla.LT578336.1                                 73275 654 +  33314783  
i Gorilla_gorilla.LT578336.1                             I 332 C 0
s Pan_paniscus.AJFE02001033.1                                    0 184 +      1169  
i Pan_paniscus.AJFE02001033.1                            N 0 C 0
s Pan_troglodytes.CM009242.2                               1474819 654 - 189151597  
i Pan_troglodytes.CM009242.2                             I 675 I 208
s Pongo_abelii.CM009266.2                                   179934 655 - 189387572  
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      194751 538 -   9816681  
i Pongo_pygmaeus.ctg66                                   C 0 I 40
e Fukomys_damarensis.KN121974.1                            2923238   0 -   3816255 C
e Myocastor_coypus.MyoCoy_scaffold_15261                     64379   0 +     67721 C
e Sorex_araneus.JH798187.1                                 4672561   0 +  18376816 C
e Erinaceus_europaeus.JH835339.1                           3667434   0 +   7059049 C
e Crocidura_indochinensis.CroInd_scaffold_77846              11054   0 +     12657 C
e Capromys_pilorides.CapPil_scaffold_762519                    791   0 -      1607 C
e Chinchilla_lanigera.JH722012.1                           1240021   0 -   2543920 C
e Nannospalax_galili.KL204047.1                             947999   0 +   3037898 C
e Saimiri_ustus.k141_360372                                  31540   0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16386   0 -     22428 C
e Saimiri_oerstedii.k141_245838                              28985   0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32294   0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       31908   0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110341   0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            29383   0 +     75252 C
e Chrysochloris_asiatica.ChrAsi_scaffold_4313612               102  23 +       302 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              25394   0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     33241   0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_89005        3205   0 +      9367 C
e Octodon_degus.JH651603.1                                11056469   0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73080   0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1933660   0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609   0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   6799   0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18951865   0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                   100094   0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   5594   0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  19862   0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       64209   0 -     66877 C
e Cavia_porcellus.DS562891.1                               5001130   0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4997688   0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    47992   0 +    145209 C
e Echinops_telfairi.JH980293.1                            62856819   0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_201229               1264   0 +     11607 C
e Elephantulus_edwardii.JH947257.1                         1227021   0 +  10337057 C
e Desmodus_rotundus.KZ672289.1                            11866587   0 -  20541912 C
e Pygathrix_nigripes_a.k141_215492                              9543   0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  155238   0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             28686   0 +     91421 C
e Callibella_humilis.k141_1233062                            11477   0 +     18648 C
e Perodicticus_potto.k141_1854441                            20753   0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          28385   0 +     31479 C
e Otolemur_garnettii.GL873799.1                             355058   0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        42053   0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566882   0 - 199412804 C
e Nycticebus_coucang.k141_1296080                             2102   0 -      9413 C
e Nycticebus_bengalensis.LG01                             93639499   0 + 196305487 C
e Loris_tardigradus.ctg83                                  5046276   0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                           12606   0 +     19643 C
e Galagoides_demidoff.k141_561628                            22522   0 -     32986 C
e Galago_senegalensis.k141_991736                            10439   0 +     22493 C
e Galago_moholi.ctg3793                                     126894   0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       21530   0 -     45910 C
e Allochrocebus_solatus.k141_3554717                         19752   0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         18067   0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            607670   0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_147047                  194   0 +     10270 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   21027   0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2111298   0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13931   0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1598   0 +      9923 C
e Tupaia_tana.TupTan_flattened_line_394                      10460   0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1836425   0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         30434   0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                106194   0 -    112863 C
e Ursus_maritimus.KK499267.1                                183442   0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              8074   0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          5999   0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        40471   0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1453222   0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                199425   0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589   0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356419   0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         9804   0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             27521   0 -     74585 C
e Lycaon_pictus.CM007581.1                                41615829   0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        814793   0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24917402   0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45108255   0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41616674   0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          223539   0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10196   0 -     23171 C
e CanFam4.chr16                                           42506560   0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6728   0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            216990   0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416665   0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_286923                      1272   0 -      1899 C
e Xerus_inauris.XerIna_scaffold_2302                        175469   0 -    224448 C
e Vicugna_pacos.KN270157.1                                   77622   0 +   5488506 C
e Varecia_variegata.k141_289850                              25503   0 -    147434 C
e Varecia_rubra.k141_787544                                  26596   0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    4873   0 -     21056 C
e Tursiops_truncatus.MRVK01000835.1                       17367092   0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6482884   0 -  10818551 C
e Tragulus_javanicus.TraJav_scaffold_3462                   175216   0 -    200418 C
e Trachypithecus_pileatus.k141_2622778                        3197   0 +     19340 C
e Trachypithecus_phayrei.ctg124                             257101   0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                        11939   0 -     13050 C
e Trachypithecus_melamera.k141_591572                         5026   0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                    11603   0 +     22490 C
e Trachypithecus_laotum.k141_928651                          30156   0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      32118   0 -     64340 C
e Trachypithecus_germaini.k141_57262                         10966   0 -     28527 C
e Trachypithecus_geei.k141_1001272                           30227   0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      30183   0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       21808   0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     35227   0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        22483   0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    481507   0 -    610378 C
e Theropithecus_gelada.CM009954.1                           354733   0 - 186847797 C
e Tarsius_wallacei.k141_226975                                8805   0 +     20590 C
e Tarsius_lariang.k141_1733899                                2007   0 +      9917 C
e Tapirus_terrestris.TapTer_scaffold_755                    106933   0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      192965   0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                4071   0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                15655   0 +     22964 C
e Symphalangus_syndactylus.tarseq_199                       392494   0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6645278   0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             126241   0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1869717   0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1865471   0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    51361   0 +     77746 C
e Semnopithecus_vetulus.k141_244474                          30427   0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     27352   0 -     29113 C
e Semnopithecus_priam.k141_714795                            24674   0 -     42441 C
e Semnopithecus_johnii.k141_843753                           17016   0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      30518   0 +     58920 C
e Semnopithecus_entellus.k141_158471                         26870   0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955   0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           9182   0 +     21866 C
e Sapajus_apella.ctg103                                     239592   0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        9603   0 +     16473 C
e Saguinus_oedipus.k141_1280589                               1748   0 -     22275 C
e Saguinus_mystax.k141_8077960                                5178   0 +      5979 C
e Saguinus_midas.LG03                                       393332   0 - 209938924 C
e Saguinus_labiatus.k141_2380921                              3575   0 -      4390 C
e Saguinus_inustus.k141_2469308                               5230   0 +      5932 C
e Saguinus_imperator.k141_1898058                             5313   0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             5219   0 +      6077 C
e Saguinus_bicolor.k141_2012906                                317   0 -      1130 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76624   0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             238047   0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104123820   0 + 195417433 C
e Rhinopithecus_bieti.k119_778604                             3205   0 +      7119 C
e Rhinolophus_sinicus.LVEH01000134.1                       2916078   0 +   3329780 C
e Rattus_norvegicus.chr16                                 37024507   0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   365   0 -     55207 C
e Puma_concolor.QAVW01001104.1                            18100463   0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3538639   0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5842124   0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            53515   0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            39627   0 +     52041 C
e Propithecus_verreauxi.k141_1047036                          9642   0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       96003   0 -     98465 C
e Propithecus_perrieri.k141_1496898                          35724   0 +     46564 C
e Propithecus_edwardsi.k141_635656                            9410   0 -     30655 C
e Propithecus_diadema.k141_153680                             5673   0 -     11706 C
e Propithecus_coronatus.k141_209299                           5076   0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1567438   0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1983943   0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5521   0 +      7663 C
e Presbytis_mitrata.k141_584736                              46500   0 -     80239 C
e Presbytis_comata.k141_980496                                1037   0 -      1047 I
e Plecturocebus_moloch.k141_1031110                          45259   0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          43792   0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      15876   0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          8939   0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          43891   0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          8940   0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44242   0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       43848   0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4444   0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9362   0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_83166            2509   0 +     19503 C
e Pithecia_vanzolinii.k141_1369553                           32944   0 +     51125 C
e Pithecia_pithecia.tarseq_165                              557930   0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           32960   0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33200   0 +     63561 C
e Pithecia_hirsuta.k141_640380                               32924   0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7176   0 -     25401 C
e Pithecia_albicans.k141_1239476                             66088   0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5315   0 +     22231 C
e Piliocolobus_tephrosceles.PDMG02000141.1                  255909   0 +  14605196 C
e Piliocolobus_kirkii.k141_1310104                            4234   0 +     40849 C
e Piliocolobus_gordonorum.k141_381342                         3644   0 -     89929 C
e Piliocolobus_badius.k141_2704958                            4174   0 +     55023 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               5492   0 -     63832 C
e Peromyscus_maniculatus.KI615324.1                         249567   0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16404   0 +     78924 C
e Papio_ursinus.k141_5784434                                   488   0 -     10386 C
e Papio_papio.k141_3538738                                     528   0 +     10553 C
e Papio_kindae.k141_2214839                                  23857   0 -     27687 C
e Papio_hamadryas.Contig39                                  293952   0 -  20919399 C
e Papio_cynocephalus.k141_1507553                            11209   0 +     21308 C
e Papio_anubis.CM001495.2                                   244924   0 - 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1617440   0 +   2937107 C
e Panthera_tigris.KE722367.1                               3973808   0 +   8748460 C
e Panthera_pardus.KV860321.1                              18463149   0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   25823   0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       6434   0 +     17875 C
e Ovis_aries.CM001607.2                                   26405915   0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8103967   0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    6349   0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95803   0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16204   0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         438320   0 -    630418 C
e Ochotona_princeps.JH802162.1                             2558190   0 -   3988456 C
e Nomascus_siki_a.k141_941534                                  27406   0 -     54323 C
e Nomascus_siki_b.tarseq_93                            8415229   0 -  22158432 C
e Nomascus_gabriellae.k141_57920                             17008   0 +     22201 C
e Nomascus_concolor.k141_735679                              11123   0 -     16345 C
e Nomascus_annamensis.k141_1771965                           55028   0 -    132029 C
e Noctilio_leporinus.NocLep_scaffold_7894                   129233   0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1233564   0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              30737   0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121079   0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_66571                         3732   0 +     18357 C
e Myotis_lucifugus.GL429869.1                               384947   0 +   4330536 C
e Myotis_davidii.KB100139.1                                4388919   0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9794744   0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             85504   0 -     86153 C
e Mus_spretus.CM004101.1                                  39498784   0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217841   0 +  89631738 C
e Mus_musculus.chr8                                       41689499   0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596302   0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42482   0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   19824   0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  27233   0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180622   0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   360898   0 +    437263 C
e Mirza_zaza.k141_766280                                     53924   0 -     62432 C
e Miopithecus_ogouensis.k141_1534655                         24015   0 -     27822 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             43449   0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6364525   4 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965132   0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186377   0 +    200668 C
e Microcebus_murinus.CM007674.1                           74986149   0 +  93316391 C
e Mico_schneideri.k141_1877700                                     20394   0 -     26561 C
e Mico_humeralifer.k141_1180625                              12075   0 -     12984 C
e Mico_argentatus.k141_582562                                11575   0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     88793   0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17431709   5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52102   0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151706   0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7502353   0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             222135   0 +    317179 C
e Manis_javanica.JSZB01003497.1                             674835   0 -    737560 C
e Mandrillus_sphinx.Contig270                               358746   0 -    752769 C
e Mandrillus_leucophaeus.scaffold280                        323915   0 +  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                224553   0 -    270270 C
e Macaca_tonkeana.k141_339739                                 4425   0 +     17132 C
e Macaca_thibetana.k99_45532                                  1259   0 -      5049 C
e Macaca_silenus.Contig273                                  272627   0 +    668171 C
e Macaca_siberu.k141_2185972                                 46719   0 +     59329 C
e Macaca_radiata.k141_2139468                                 2778   0 +     14901 C
e Macaca_nigra.k141_2818840                                  50247   0 -     62418 C
e Macaca_nemestrina.KQ007038.1                              401075   0 +  25927173 C
e Macaca_mulatta.NC_041758.1                                416845   0 - 187317192 C
e Macaca_maura.k141_1103459                                  47642   0 +     51645 C
e Macaca_leonina.k141_321385                                 37898   0 -     50087 C
e Macaca_fuscata.k119_546792                                 26722   0 +     30527 C
e Macaca_fascicularis.k141_1617581                            1607   0 -      5035 C
e Macaca_cyclopis.k119_263443                                26769   0 +     30207 C
e Macaca_assamensis.Contig5                                 374501   0 -  60120075 C
e Macaca_arctoides.k141_1757516                              46839   0 -     61512 C
e Loxodonta_africana.GL010049.1                           39086194   0 +  43346337 C
e Lophocebus_aterrimus.ctg367                               335450   0 -   1826925 C
e Lipotes_vexillifer.KE559953.1                             342509   0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                      10317   0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                         10317   0 +     24756 C
e Lepilemur_dorsalis.k141_387009                             10307   0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                         10311   0 +     29618 C
e Leontocebus_nigricollis.k141_3905062                        5030   0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           5207   0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        5453   0 -     13097 C
e Lemur_catta.scaffold_24                                 14760795   0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    64478   0 -     65777 C
e Lagothrix_lagothricha.k141_246028                          44546   0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 73164   0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1241322   0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11324   0 -     16823 C
e Indri_indri.k141_2415743                                    3687   0 +     11955 C
e Ictidomys_tridecemlineatus.JH393364.1                     388139   0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       8413   0 -    135385 C
e Hylobates_pileatus_a.tarseq_633                            7802804   0 +  11177569 C
e Hylobates_pileatus_b.LG02                                       2053926   0 + 191637585 C
e Hylobates_klossii.k141_738755                              14326   0 +     55766 C
e Hylobates_agilis.k141_1155965                               7142   0 +     12352 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71463   0 +     83186 C
e Hoolock_leuconedys.ctg274                                    144097   0 -    630532 C
e Hipposideros_galeritus.HipGal_scaffold_164997               2365   0 -      2730 C
e Hipposideros_armiger.JXIK01000431.1                      1552928   0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                8931   0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1530   0 +      8654 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10788   0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                32090   0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         18141   0 -     53142 C
e Hapalemur_meridionalis.k141_258450                         11139   0 -     42923 C
e Hapalemur_griseus.k141_763500                              62268   0 -     66874 C
e Hapalemur_gilberti.k141_646465                             37397   0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          15998   0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_10447                    3666   0 -     78134 C
e Glis_glis.GliGli_scaffold_163929                            2600   0 -      6791 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93122   0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_51812                2452   0 -     28519 C
e Felis_nigripes.FelNig_flattened_line_31944                 29000   0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185117900   0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              60314   0 -    111500 C
e Eulemur_rufus.k141_514691                                  43911   0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            6191   0 +     30972 C
e Eulemur_mongoz.k141_232305                                 49467   0 -     97555 C
e Eulemur_macaco.k141_1562045                                25273   0 -     75513 C
e Eulemur_fulvus.k141_636316                                 54640   0 -     65740 C
e Eulemur_flavifrons.k141_433119                             44316   0 +     68309 C
e Eulemur_coronatus.k141_384460                              87753   0 +    112731 C
e Eulemur_collaris.k141_601111                               43783   0 -     70999 C
e Eulemur_albifrons.k141_51491                               16073   0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_57114               142   0 +     25849 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           72429   0 -    133382 C
e Erythrocebus_patas.Contig38                               264523   0 +  21539334 C
e Equus_przewalskii.KK951119.1                              412638   0 -    498745 C
e Equus_caballus.CM000403.2                               21376656   0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3042718   0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12580180   0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           15683   0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33676   0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241405   0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               7571   0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  140573   0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665773   0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18633221   0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        293857   0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    646696   0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5657   0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213117830   0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46140   0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4084   0 -      8242 C
e Condylura_cristata.JH655891.1                           35808250   0 +  53390261 C
e Colobus_polykomos.k141_906115                               4224   0 -     84244 C
e Colobus_guereza.LG01                                      380667   0 - 200372422 C
e Colobus_angolensis.KN981557.1                             410786   0 -   2368649 C
e Chlorocebus_sabaeus.CM001947.1                            306378   0 - 135778131 C
e Chlorocebus_pygerythrus.k141_3063162                       11526   0 -     44032 C
e Chlorocebus_aethiops.ctg25                                344987   0 +  18827391 C
e Chiropotes_sagulatus.k141_1113111                           9271   0 +     34062 C
e Chiropotes_israelita.k141_313004                           43720   0 -    112038 C
e Chiropotes_albinasus.k141_2628359                            317   0 +      1057 C
e Cheracebus_torquatus.k141_890198                           20654   0 +     39636 C
e Cheracebus_regulus.k141_471822                             20865   0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20610   0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10197   0 -     32913 C
e Cheirogaleus_medius.k141_759766                             6454   0 -     15404 C
e Cheirogaleus_major.k141_666340                             31940   0 -     33796 C
e Cercopithecus_roloway.k141_3012935                         24086   0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           27125   0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         4729   0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       28567   0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        33663   0 -     45857 C
e Cercopithecus_mona.ctg39                                  271298   0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  365571   0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                           12984   0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          29204   0 -     34525 C
e Cercopithecus_diana.k141_132293                            13472   0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           8363   0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        28399   0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          46121   0 -    148725 C
e Cercocebus_lunulatus.k141_2500334                           1737   0 -     14410 C
e Cercocebus_chrysogaster.k141_1522556                       46304   0 +     47900 C
e Cercocebus_atys.KQ010504.1                                142565   0 -   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20334   0 +     27315 C
e Cephalopachus_bancanus.k141_1689090                         3742   0 -      5494 C
e Cebus_unicolor.k141_1654760                                68368   0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9272   0 -     34880 C
e Cebus_albifrons.Contig27                                  374218   0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44450   0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6392   0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     80881   0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    28954   0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           271781   0 +    496798 C
e Capra_hircus.CM004588.1                                 26593051   0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27410777   0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1210231   0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4666573   0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7632286   0 +  17673402 C
e Callithrix_kuhlii.k119_102356                               2994   0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455471   0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3079   0 -      8861 C
e Callimico_goeldii.k141_1609886                             10993   0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         21822   0 +    119600 C
e Cacajao_hosomi.k141_81245                                  21909   0 +     95584 C
e Cacajao_calvus.k141_89051                                  44383   0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9089   0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1531689   0 -   4408762 C
e Bos_taurus.CM000203.6                                   27546681   0 -  45695690 C
e Bos_mutus.JH880303.1                                      756539   0 +   1948126 C
e Bos_indicus.CM003047.1                                  20357975   0 +  48749331 C
e Bison_bison.KN261452.1                                     23585   0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     88054   0 +    124022 C
e Balaenoptera_bonaerensis.DF411050.1                         1315   0 -     25979 C
e Balaenoptera_acutorostrata.KI537508.1                    7964815   0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               7552   0 -     19611 C
e Avahi_laniger.k141_2756659                                  7544   0 +     11645 C
e Ateles_paniscus.k141_866194                                24280   0 -     33135 C
e Ateles_marginatus.k141_970259                              50222   0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              34852   0 +     44353 C
e Ateles_chamek.k141_615173                                   7297   0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12162   0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               275995   0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      17471   0 -     32367 C
e Aotus_vociferans.k141_1514463                               2957   0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3398   0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673404   0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3122   0 -     15923 C
e Aotus_azarae.k141_887050                                    2497   0 +     17741 C
e Antilocapra_americana.AntAmePen_scaffold_21030             52125   0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178470   0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1587048   0 +   2318259 C
e Alouatta_seniculus.k141_928287                             34239   0 +     42133 C
e Alouatta_puruensis.k141_251022                             10105   0 +     30854 C
e Alouatta_palliata.k141_638677                              47932   0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42283   0 +     45454 C
e Alouatta_macconnelli.k141_1277969                            765   0 -      3959 C
e Alouatta_juara.k141_1687208                                43658   0 -     64179 C
e Alouatta_discolor.k141_2561099                             45208   0 +     55831 C
e Alouatta_caraya.k141_1109140                               45769   0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73530   0 -     84148 C
e Allochrocebus_lhoesti.k141_3412094                          1516   0 +     13857 C
e Allenopithecus_nigroviridis.k141_3755588                   49485   0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    19841   0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27463   0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814204   0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       8126 196 +     36723 gcgaaggtctgcagctt-cactcc-tgagccagcaagacca--caaacccaccagaaggaagaaactcccaacacatctgaacatcagaa-ggaacagactccagacacgccgcctttaagaactgtaacactcaccttgagggtctgtagcttcattcttgaagtcagtgagacc--aagaacccaccaattctggacacaa
s Gorilla_beringei.k141_420802                                 562 196 -      1361 gcgaaggtctgcagctt-cacctc-tgagccagcaagacca--caaacccaccagaaggaacaaactccaaacacatccgaacatcagaa-ggaacaaattccagacataccgcctttaagaactgtaacactcaccttgagggtccgtagcttcattcttgaagtcagtgagaccaa--gaacccaccaattctggacacaA
i Gorilla_beringei.k141_420802                           I 102 C 0
s Gorilla_gorilla.LT578336.1                                 73929 196 +  33314783 gcgaaggtctgcagctt-cactcc-tgagccagcgagaccg--caaacccaccagaaggaagaaactctgaacacatccgaacatcagaa-ggaacaaactccagacatgccacctttaagaactgtaacactcaccttgagggtctgtagcttctttcttgaagtcagtgagaccaa--gaacctaccaattctggacacaa
i Gorilla_gorilla.LT578336.1                             C 0 I 24
s Pan_paniscus.AJFE02001033.1                                  184 196 +      1169 acgaaggtctgcagctt-cactcc-tgagccagtgagactg--caaacccaccagaaggaagaaactctgaacacatccgaacatcagaa-ggaacaaactccagacacgccgcctttaataactgtaacactcaccttgAGGGTCTgtagcttcattcttgaagtcagtgagacc--aagaacccaccaattctggacgcAA
i Pan_paniscus.AJFE02001033.1                            C 0 C 0
s Pan_troglodytes.KZ622849.1                                 36166 196 -    110857 gcaaaggtctgcagctt-cactcc-tgagccagtgagaccg--caaacccaccagaaggaagaaactctgaacacatccgaacatcagaa-ggaacaaactccagacatgcCACCTTtcagaactgtaacactcaccttgAGGGCCTgtagcttcattcttgaagtcagtgagacc--gagaacccaccaattctggacacaa
i Pan_troglodytes.KZ622849.1                             I 654 I 24
s Pongo_abelii.CM009266.2                                   180589 196 - 189387572 gcgaaggtctgcagctt-aactcc-tgagccagcaagacca--caagcccaccagaaggaagaaactctgaacacatcccaacatcagaa-ggaacaaactccggacacgccacctttaagaactgtaacacccaccgtgagggtccgcagcttcattcttgaagtcagtgacaccaa--gaacccaccaattctggacacag
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195329 196 -   9816681 gcgaaggtctgcagctt-aactcc-tgagccagcaagacca--caagcccaccagaaggaagaaactctgaacacatcccaacatcagaa-ggaacaaactccggacacgccacctttaagaactgtaacacccaccgtgagggtccgcagcttcattcttgaagtcagtgacaccaa--gaacccaccaattctggacacaG
i Pongo_pygmaeus.ctg66                                   I 40 C 0
e Fukomys_damarensis.KN121974.1                            2923238   0 -   3816255 C
e Myocastor_coypus.MyoCoy_scaffold_15261                     64379   0 +     67721 C
e Sorex_araneus.JH798187.1                                 4672561   0 +  18376816 C
e Erinaceus_europaeus.JH835339.1                           3667434   0 +   7059049 C
e Crocidura_indochinensis.CroInd_scaffold_77846              11054   0 +     12657 C
e Capromys_pilorides.CapPil_scaffold_762519                    791   0 -      1607 C
e Chinchilla_lanigera.JH722012.1                           1240021   0 -   2543920 C
e Nannospalax_galili.KL204047.1                             947999   0 +   3037898 C
e Saimiri_ustus.k141_360372                                  31540   0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16386   0 -     22428 C
e Saimiri_oerstedii.k141_245838                              28985   0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32294   0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       31908   0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110341   0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            29383   0 +     75252 C
e Chrysochloris_asiatica.ChrAsi_scaffold_4313612               102  23 +       302 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              25394   0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     33241   0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_89005        3205   0 +      9367 C
e Octodon_degus.JH651603.1                                11056469   0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73080   0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1933660   0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609   0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   6799   0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18951865   0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                   100094   0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   5594   0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  19862   0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       64209   0 -     66877 C
e Cavia_porcellus.DS562891.1                               5001130   0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4997688   0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    47992   0 +    145209 C
e Echinops_telfairi.JH980293.1                            62856819   0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_201229               1264   0 +     11607 C
e Elephantulus_edwardii.JH947257.1                         1227021   0 +  10337057 C
e Desmodus_rotundus.KZ672289.1                            11866587   0 -  20541912 C
e Pygathrix_nigripes_a.k141_215492                              9543   0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  155238   0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             28686   0 +     91421 C
e Callibella_humilis.k141_1233062                            11477   0 +     18648 C
e Perodicticus_potto.k141_1854441                            20753   0 -     24908 C
e Perodicticus_ibeanus.k141_1921260                          28385   0 +     31479 C
e Otolemur_garnettii.GL873799.1                             355058   0 +   1103335 C
e Otolemur_crassicaudatus.k141_649260                        42053   0 -     51505 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566882   0 - 199412804 C
e Nycticebus_coucang.k141_1296080                             2102   0 -      9413 C
e Nycticebus_bengalensis.LG01                             93639499   0 + 196305487 C
e Loris_tardigradus.ctg83                                  5046276   0 -   6120653 C
e Loris_lydekkerianus.k141_2031736                           12606   0 +     19643 C
e Galagoides_demidoff.k141_561628                            22522   0 -     32986 C
e Galago_senegalensis.k141_991736                            10439   0 +     22493 C
e Galago_moholi.ctg3793                                     126894   0 -    137831 C
e Arctocebus_calabarensis.k141_1364444                       21530   0 -     45910 C
e Allochrocebus_solatus.k141_3554717                         19752   0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         18067   0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            607670   0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_147047                  194   0 +     10270 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   21027   0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2111298   0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13931   0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1598   0 +      9923 C
e Tupaia_tana.TupTan_flattened_line_394                      10460   0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1836425   0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         30434   0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                106194   0 -    112863 C
e Ursus_maritimus.KK499267.1                                183442   0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              8074   0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          5999   0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        40471   0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1453222   0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                199425   0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589   0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356419   0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         9804   0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             27521   0 -     74585 C
e Lycaon_pictus.CM007581.1                                41615829   0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        814793   0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24917402   0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45108255   0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41616674   0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          223539   0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10196   0 -     23171 C
e CanFam4.chr16                                           42506560   0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6728   0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            216990   0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416665   0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_286923                      1272   0 -      1899 C
e Xerus_inauris.XerIna_scaffold_2302                        175469   0 -    224448 C
e Vicugna_pacos.KN270157.1                                   77622   0 +   5488506 C
e Varecia_variegata.k141_289850                              25503   0 -    147434 C
e Varecia_rubra.k141_787544                                  26596   0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    4873   0 -     21056 C
e Tursiops_truncatus.MRVK01000835.1                       17367092   0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6482884   0 -  10818551 C
e Tragulus_javanicus.TraJav_scaffold_3462                   175216   0 -    200418 C
e Trachypithecus_pileatus.k141_2622778                        3197   0 +     19340 C
e Trachypithecus_phayrei.ctg124                             257101   0 -   6242583 C
e Trachypithecus_obscurus.k141_848057                        11939   0 -     13050 C
e Trachypithecus_melamera.k141_591572                         5026   0 -      6147 C
e Trachypithecus_leucocephalus.k141_96450                    11603   0 +     22490 C
e Trachypithecus_laotum.k141_928651                          30156   0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      32118   0 -     64340 C
e Trachypithecus_germaini.k141_57262                         10966   0 -     28527 C
e Trachypithecus_geei.k141_1001272                           30227   0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      30183   0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       21808   0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     35227   0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        22483   0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    481507   0 -    610378 C
e Theropithecus_gelada.CM009954.1                           354733   0 - 186847797 C
e Tarsius_wallacei.k141_226975                                8805   0 +     20590 C
e Tarsius_lariang.k141_1733899                                2007   0 +      9917 C
e Tapirus_terrestris.TapTer_scaffold_755                    106933   0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      192965   0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                4071   0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                15655   0 +     22964 C
e Symphalangus_syndactylus.tarseq_199                       392494   0 +   1523678 C
e Sus_scrofa.CM000828.4                                    6645278   0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             126241   0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1869717   0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1865471   0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    51361   0 +     77746 C
e Semnopithecus_vetulus.k141_244474                          30427   0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     27352   0 -     29113 C
e Semnopithecus_priam.k141_714795                            24674   0 -     42441 C
e Semnopithecus_johnii.k141_843753                           17016   0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      30518   0 +     58920 C
e Semnopithecus_entellus.k141_158471                         26870   0 +     27374 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955   0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           9182   0 +     21866 C
e Sapajus_apella.ctg103                                     239592   0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        9603   0 +     16473 C
e Saguinus_oedipus.k141_1280589                               1748   0 -     22275 C
e Saguinus_mystax.k141_8077960                                5178   0 +      5979 C
e Saguinus_midas.LG03                                       393332   0 - 209938924 C
e Saguinus_labiatus.k141_2380921                              3575   0 -      4390 C
e Saguinus_inustus.k141_2469308                               5230   0 +      5932 C
e Saguinus_imperator.k141_1898058                             5313   0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             5219   0 +      6077 C
e Saguinus_bicolor.k141_2012906                                317   0 -      1130 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76624   0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             238047   0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104123820   0 + 195417433 C
e Rhinopithecus_bieti.k119_778604                             3205   0 +      7119 C
e Rhinolophus_sinicus.LVEH01000134.1                       2916078   0 +   3329780 C
e Rattus_norvegicus.chr16                                 37024507   0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   365   0 -     55207 C
e Puma_concolor.QAVW01001104.1                            18100463   0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3538639   0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5842124   0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            53515   0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            39627   0 +     52041 C
e Propithecus_verreauxi.k141_1047036                          9642   0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       96003   0 -     98465 C
e Propithecus_perrieri.k141_1496898                          35724   0 +     46564 C
e Propithecus_edwardsi.k141_635656                            9410   0 -     30655 C
e Propithecus_diadema.k141_153680                             5673   0 -     11706 C
e Propithecus_coronatus.k141_209299                           5076   0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1567438   0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1983943   0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5521   0 +      7663 C
e Presbytis_mitrata.k141_584736                              46500   0 -     80239 C
e Presbytis_comata.k141_980496                                1037   0 -      1047 I
e Plecturocebus_moloch.k141_1031110                          45259   0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          43792   0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      15876   0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          8939   0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          43891   0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          8940   0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44242   0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       43848   0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4444   0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9362   0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_83166            2509   0 +     19503 C
e Pithecia_vanzolinii.k141_1369553                           32944   0 +     51125 C
e Pithecia_pithecia.tarseq_165                              557930   0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           32960   0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33200   0 +     63561 C
e Pithecia_hirsuta.k141_640380                               32924   0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7176   0 -     25401 C
e Pithecia_albicans.k141_1239476                             66088   0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5315   0 +     22231 C
e Piliocolobus_tephrosceles.PDMG02000141.1                  255909   0 +  14605196 C
e Piliocolobus_kirkii.k141_1310104                            4234   0 +     40849 C
e Piliocolobus_gordonorum.k141_381342                         3644   0 -     89929 C
e Piliocolobus_badius.k141_2704958                            4174   0 +     55023 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               5492   0 -     63832 C
e Peromyscus_maniculatus.KI615324.1                         249567   0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16404   0 +     78924 C
e Papio_ursinus.k141_5784434                                   488   0 -     10386 C
e Papio_papio.k141_3538738                                     528   0 +     10553 C
e Papio_kindae.k141_2214839                                  23857   0 -     27687 C
e Papio_hamadryas.Contig39                                  293952   0 -  20919399 C
e Papio_cynocephalus.k141_1507553                            11209   0 +     21308 C
e Papio_anubis.CM001495.2                                   244924   0 - 183742232 C
e Pantholops_hodgsonii.KE114653.1                          1617440   0 +   2937107 C
e Panthera_tigris.KE722367.1                               3973808   0 +   8748460 C
e Panthera_pardus.KV860321.1                              18463149   0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   25823   0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       6434   0 +     17875 C
e Ovis_aries.CM001607.2                                   26405915   0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8103967   0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    6349   0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95803   0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16204   0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         438320   0 -    630418 C
e Ochotona_princeps.JH802162.1                             2558190   0 -   3988456 C
e Nomascus_siki_a.k141_941534                                  27406   0 -     54323 C
e Nomascus_siki_b.tarseq_93                            8415229   0 -  22158432 C
e Nomascus_gabriellae.k141_57920                             17008   0 +     22201 C
e Nomascus_concolor.k141_735679                              11123   0 -     16345 C
e Nomascus_annamensis.k141_1771965                           55028   0 -    132029 C
e Noctilio_leporinus.NocLep_scaffold_7894                   129233   0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1233564   0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              30737   0 +     34575 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121079   0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_66571                         3732   0 +     18357 C
e Myotis_lucifugus.GL429869.1                               384947   0 +   4330536 C
e Myotis_davidii.KB100139.1                                4388919   0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9794744   0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_12866             85504   0 -     86153 C
e Mus_spretus.CM004101.1                                  39498784   0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217841   0 +  89631738 C
e Mus_musculus.chr8                                       41689499   0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596302   0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42482   0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   19824   0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  27233   0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180622   0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   360898   0 +    437263 C
e Mirza_zaza.k141_766280                                     53924   0 -     62432 C
e Miopithecus_ogouensis.k141_1534655                         24015   0 -     27822 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             43449   0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6364525   4 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965132   0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186377   0 +    200668 C
e Microcebus_murinus.CM007674.1                           74986149   0 +  93316391 C
e Mico_schneideri.k141_1877700                                     20394   0 -     26561 C
e Mico_humeralifer.k141_1180625                              12075   0 -     12984 C
e Mico_argentatus.k141_582562                                11575   0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     88793   0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17431709   5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52102   0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151706   0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7502353   0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             222135   0 +    317179 C
e Manis_javanica.JSZB01003497.1                             674835   0 -    737560 C
e Mandrillus_sphinx.Contig270                               358746   0 -    752769 C
e Mandrillus_leucophaeus.scaffold280                        323915   0 +  24302211 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                224553   0 -    270270 C
e Macaca_tonkeana.k141_339739                                 4425   0 +     17132 C
e Macaca_thibetana.k99_45532                                  1259   0 -      5049 C
e Macaca_silenus.Contig273                                  272627   0 +    668171 C
e Macaca_siberu.k141_2185972                                 46719   0 +     59329 C
e Macaca_radiata.k141_2139468                                 2778   0 +     14901 C
e Macaca_nigra.k141_2818840                                  50247   0 -     62418 C
e Macaca_nemestrina.KQ007038.1                              401075   0 +  25927173 C
e Macaca_mulatta.NC_041758.1                                416845   0 - 187317192 C
e Macaca_maura.k141_1103459                                  47642   0 +     51645 C
e Macaca_leonina.k141_321385                                 37898   0 -     50087 C
e Macaca_fuscata.k119_546792                                 26722   0 +     30527 C
e Macaca_fascicularis.k141_1617581                            1607   0 -      5035 C
e Macaca_cyclopis.k119_263443                                26769   0 +     30207 C
e Macaca_assamensis.Contig5                                 374501   0 -  60120075 C
e Macaca_arctoides.k141_1757516                              46839   0 -     61512 C
e Loxodonta_africana.GL010049.1                           39086194   0 +  43346337 C
e Lophocebus_aterrimus.ctg367                               335450   0 -   1826925 C
e Lipotes_vexillifer.KE559953.1                             342509   0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                      10317   0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                         10317   0 +     24756 C
e Lepilemur_dorsalis.k141_387009                             10307   0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                         10311   0 +     29618 C
e Leontocebus_nigricollis.k141_3905062                        5030   0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           5207   0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        5453   0 -     13097 C
e Lemur_catta.scaffold_24                                 14760795   0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    64478   0 -     65777 C
e Lagothrix_lagothricha.k141_246028                          44546   0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 73164   0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1241322   0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11324   0 -     16823 C
e Indri_indri.k141_2415743                                    3687   0 +     11955 C
e Ictidomys_tridecemlineatus.JH393364.1                     388139   0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       8413   0 -    135385 C
e Hylobates_pileatus_a.tarseq_633                            7802804   0 +  11177569 C
e Hylobates_pileatus_b.LG02                                       2053926   0 + 191637585 C
e Hylobates_klossii.k141_738755                              14326   0 +     55766 C
e Hylobates_agilis.k141_1155965                               7142   0 +     12352 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71463   0 +     83186 C
e Hoolock_leuconedys.ctg274                                    144097   0 -    630532 C
e Hipposideros_galeritus.HipGal_scaffold_164997               2365   0 -      2730 C
e Hipposideros_armiger.JXIK01000431.1                      1552928   0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                8931   0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1530   0 +      8654 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10788   0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                32090   0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         18141   0 -     53142 C
e Hapalemur_meridionalis.k141_258450                         11139   0 -     42923 C
e Hapalemur_griseus.k141_763500                              62268   0 -     66874 C
e Hapalemur_gilberti.k141_646465                             37397   0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          15998   0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_10447                    3666   0 -     78134 C
e Glis_glis.GliGli_scaffold_163929                            2600   0 -      6791 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93122   0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_51812                2452   0 -     28519 C
e Felis_nigripes.FelNig_flattened_line_31944                 29000   0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185117900   0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              60314   0 -    111500 C
e Eulemur_rufus.k141_514691                                  43911   0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            6191   0 +     30972 C
e Eulemur_mongoz.k141_232305                                 49467   0 -     97555 C
e Eulemur_macaco.k141_1562045                                25273   0 -     75513 C
e Eulemur_fulvus.k141_636316                                 54640   0 -     65740 C
e Eulemur_flavifrons.k141_433119                             44316   0 +     68309 C
e Eulemur_coronatus.k141_384460                              87753   0 +    112731 C
e Eulemur_collaris.k141_601111                               43783   0 -     70999 C
e Eulemur_albifrons.k141_51491                               16073   0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_57114               142   0 +     25849 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           72429   0 -    133382 C
e Erythrocebus_patas.Contig38                               264523   0 +  21539334 C
e Equus_przewalskii.KK951119.1                              412638   0 -    498745 C
e Equus_caballus.CM000403.2                               21376656   0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3042718   0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12580180   0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           15683   0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33676   0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241405   0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               7571   0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  140573   0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665773   0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18633221   0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        293857   0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    646696   0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5657   0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213117830   0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46140   0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4084   0 -      8242 C
e Condylura_cristata.JH655891.1                           35808250   0 +  53390261 C
e Colobus_polykomos.k141_906115                               4224   0 -     84244 C
e Colobus_guereza.LG01                                      380667   0 - 200372422 C
e Colobus_angolensis.KN981557.1                             410786   0 -   2368649 C
e Chlorocebus_sabaeus.CM001947.1                            306378   0 - 135778131 C
e Chlorocebus_pygerythrus.k141_3063162                       11526   0 -     44032 C
e Chlorocebus_aethiops.ctg25                                344987   0 +  18827391 C
e Chiropotes_sagulatus.k141_1113111                           9271   0 +     34062 C
e Chiropotes_israelita.k141_313004                           43720   0 -    112038 C
e Chiropotes_albinasus.k141_2628359                            317   0 +      1057 C
e Cheracebus_torquatus.k141_890198                           20654   0 +     39636 C
e Cheracebus_regulus.k141_471822                             20865   0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20610   0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10197   0 -     32913 C
e Cheirogaleus_medius.k141_759766                             6454   0 -     15404 C
e Cheirogaleus_major.k141_666340                             31940   0 -     33796 C
e Cercopithecus_roloway.k141_3012935                         24086   0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           27125   0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         4729   0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       28567   0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        33663   0 -     45857 C
e Cercopithecus_mona.ctg39                                  271298   0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  365571   0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                           12984   0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          29204   0 -     34525 C
e Cercopithecus_diana.k141_132293                            13472   0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           8363   0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        28399   0 -     40656 C
e Cercocebus_torquatus.k141_2159127                          46121   0 -    148725 C
e Cercocebus_lunulatus.k141_2500334                           1737   0 -     14410 C
e Cercocebus_chrysogaster.k141_1522556                       46304   0 +     47900 C
e Cercocebus_atys.KQ010504.1                                142565   0 -   4669795 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20334   0 +     27315 C
e Cephalopachus_bancanus.k141_1689090                         3742   0 -      5494 C
e Cebus_unicolor.k141_1654760                                68368   0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9272   0 -     34880 C
e Cebus_albifrons.Contig27                                  374218   0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44450   0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6392   0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     80881   0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    28954   0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           271781   0 +    496798 C
e Capra_hircus.CM004588.1                                 26593051   0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27410777   0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1210231   0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4666573   0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7632286   0 +  17673402 C
e Callithrix_kuhlii.k119_102356                               2994   0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455471   0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3079   0 -      8861 C
e Callimico_goeldii.k141_1609886                             10993   0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         21822   0 +    119600 C
e Cacajao_hosomi.k141_81245                                  21909   0 +     95584 C
e Cacajao_calvus.k141_89051                                  44383   0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9089   0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1531689   0 -   4408762 C
e Bos_taurus.CM000203.6                                   27546681   0 -  45695690 C
e Bos_mutus.JH880303.1                                      756539   0 +   1948126 C
e Bos_indicus.CM003047.1                                  20357975   0 +  48749331 C
e Bison_bison.KN261452.1                                     23585   0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     88054   0 +    124022 C
e Balaenoptera_bonaerensis.DF411050.1                         1315   0 -     25979 C
e Balaenoptera_acutorostrata.KI537508.1                    7964815   0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               7552   0 -     19611 C
e Avahi_laniger.k141_2756659                                  7544   0 +     11645 C
e Ateles_paniscus.k141_866194                                24280   0 -     33135 C
e Ateles_marginatus.k141_970259                              50222   0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              34852   0 +     44353 C
e Ateles_chamek.k141_615173                                   7297   0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12162   0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               275995   0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      17471   0 -     32367 C
e Aotus_vociferans.k141_1514463                               2957   0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3398   0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673404   0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3122   0 -     15923 C
e Aotus_azarae.k141_887050                                    2497   0 +     17741 C
e Antilocapra_americana.AntAmePen_scaffold_21030             52125   0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178470   0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1587048   0 +   2318259 C
e Alouatta_seniculus.k141_928287                             34239   0 +     42133 C
e Alouatta_puruensis.k141_251022                             10105   0 +     30854 C
e Alouatta_palliata.k141_638677                              47932   0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42283   0 +     45454 C
e Alouatta_macconnelli.k141_1277969                            765   0 -      3959 C
e Alouatta_juara.k141_1687208                                43658   0 -     64179 C
e Alouatta_discolor.k141_2561099                             45208   0 +     55831 C
e Alouatta_caraya.k141_1109140                               45769   0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73530   0 -     84148 C
e Allochrocebus_lhoesti.k141_3412094                          1516   0 +     13857 C
e Allenopithecus_nigroviridis.k141_3755588                   49485   0 +     53615 C
e Allactaga_bullata.AllBul_scaffold_20030                    19841   0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27463   0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814204   0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       8322 12 +     36723 tc------------t-ta-------tac-c-a-ca
s Acinonyx_jubatus.LLWD01001279.1                           814204 11 +   1699592 gt------------t-t--------tgc-c-t-ca
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27463 11 +     63021 TT------------T-T--------TGA-T-A-CA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416665 11 +  29979442 tt------------t-t--------tgc-a-t-ca
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            216990 11 +    347723 tc------------t-t--------tgc-c-t-ca
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19841  6 -     61208 --------------------------gc-c-a-ca
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49485 12 +     53615 tc------------t-ta-------tgc-c-a-ca
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1516 12 +     13857 tc------------t-ta-------tgc-c-a-ca
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18067 12 -     21945 tc------------t-ta-------tgc-c-a-ca
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19752 12 +     32033 tc------------t-ta-------tgc-c-a-ca
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73530 12 -     84148 tc------------t-ta-------tgc-c-a-ca
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45769 12 -     78289 tc------------t-ta-------tgc-c-a-ca
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45208 12 +     55831 tc------------t-ta-------tgc-c-a-ca
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43658 12 -     64179 tc------------t-ta-------tgc-c-a-ca
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            765 12 -      3959 tc------------t-ta-------tgc-c-a-ca
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42283 12 +     45454 tc------------t-ta-------tgc-c-a-ca
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47932 12 +     70886 tc------------t-ta-------tgc-c-a-ca
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10105 12 +     30854 tc------------t-ta-------tgc-c-a-ca
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34239 12 +     42133 tc------------t-ta-------tgc-c-a-ca
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587048 11 +   2318259 tc------------t-t--------tgc-t-a-cc
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178470 12 -    412891 tc------------ttt--------tgc-c-a-ca
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52125 11 -     68529 tc------------t-t--------tgc-c-a-cc
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2497 12 +     17741 tc------------t-ta-------tgc-c-a-ca
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3122 12 -     15923 tc------------t-ta-------tgt-c-a-ca
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673404 12 +   5030052 tc------------t-ta-------tGT-C-A-CA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3398 12 -     16391 tc------------t-ta-------tgc-c-a-ca
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2957 12 -     17186 tc------------t-ta-------tgc-c-a-ca
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17471 11 -     32367 TA------------T-T--------TGC-C-A-CG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       21530 11 -     45910 tc------------t-t--------tgc-c-a-ca
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6728 11 -     15198 tc------------t-t--------tgc-c-a-ca
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               275995 12 +  21539123 tc------------t-ta-------tgc-c-a-ca
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12162 12 +     48076 tc------------t-ta-------tgc-c-a-ca
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7297 12 -     28759 tc------------t-ta-------tgc-c-a-ca
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34852 12 +     44353 tc------------t-ta-------tgc-c-a-ca
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50222 12 -     71267 tc------------t-ta-------tgc-c-a-ca
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24280 12 -     33135 tc------------t-ta-------tgc-c-a-ca
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7544 11 +     11645 tc------------t-t--------tgc-c-a-ca
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7552 11 -     19611 tc------------t-t--------tgc-c-a-ca
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964815 11 -  23207421 tc------------t-t--------tgc-c-a-ca
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1315 11 -     25979 tc------------t-t--------tgc-c-a-ca
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88054 11 +    124022 tc------------t-t--------tgc-t-a-cc
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23585 11 +    288883 tc------------t-t--------tgc-c-a-cc
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357975 11 +  48749331 tc------------t-t--------tgc-c-a-cc
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756539 11 +   1948126 tc------------t-t--------tgc-c-a-cc
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546681 11 -  45695690 tc------------t-t--------tgc-c-a-cc
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531689 11 -   4408762 tc------------t-t--------tgc-c-a-cc
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9089 12 +     28062 tc------------t-tA-------TGC-T-A-CA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44383 12 -     91139 tc------------t-tA-------TGC-T-A-CA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21909 12 +     95584 tc------------t-tA-------TGC-T-A-CA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21822 12 +    119600 tc------------t-tA-------TGC-T-A-CA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11477 12 +     18648 tc------------t-ta-------tgc-c-a-ca
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             10993 12 -     13885 tc------------t-ta-------tgc-c-a-ca
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3079 12 -      8861 tc------------t-ta-------tgc-c-a-ca
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455471 12 + 189096842 TC------------T-TA-------TGC-C-A-CA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               2994 12 +      8664 tc------------t-ta-------tgc-c-a-ca
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632286 11 +  17673402 tc------------t-t--------tgc-c-a-ca
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666573 11 +   7040546 tc------------t-t--------tgc-c-a-ca
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210231 11 +   1652518 tc------------t-t--------tgc-c-a-ca
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506560 11 +  60362399 tc------------t-t--------tgc-c-t-ca
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10196 11 -     23171 tc------------t-t--------tgc-c-t-ca
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223539 11 +   9314153 tc------------t-t--------tgc-c-t-ca
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616674 11 +  59632846 tc------------t-t--------tgc-c-t-ca
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108255 11 -  63665305 tc------------t-t--------tgc-c-t-ca
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410777 11 -  46296322 tc------------t-t--------tgc-t-a-cc
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26593051 11 +  44709034 tc------------t-t--------tgc-t-a-cc
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    791 11 -      1607 TC------------T-G--------TGT-T-A-CA
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           271781 11 +    496798 tc------------t-t--------tac-C-A-CA
i Carlito_syrichta.NW_007259797.1                        C 0 I 313
s Carollia_perspicillata.CarPer_scaffold_107871               1598 11 +      9923 tc------------t-t--------tga-c-a-ca
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28954 11 -     39886 tc------------t-t--------ttc-c-a-ta
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80881 11 -    217609 tc------------t-t--------tgc-c-c-tg
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997688 11 +  23392119 tc------------t-t--------tgt-t-a-ca
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001130 11 +  23407841 tc------------t-t--------tgt-t-a-ca
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64209 11 -     66877 tc------------t-t--------tgt-t-a-ca
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6392 12 -     12580 tc------------t-ta-------tgc-c-a-ca
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44450 12 +     53515 tc------------t-ta-------tgc-c-a-ca
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374218 12 -  26074798 tc------------t-ta-------tgc-c-a-ca
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9272 12 -     34880 tc------------t-ta-------tgc-c-a-ca
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68368 12 -     89041 tc------------t-ta-------tgc-c-a-ca
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         3742 11 -      5494 tc------------t-t--------tac-c-a-ca
i Cephalopachus_bancanus.k141_1689090                    C 0 I 312
s Ceratotherium_simum.JH767749.1                          15493501 11 -  27778364 tc------------t-t--------tgc-c-a-ca
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20334 11 +     27315 tc------------t-t--------tgc-c-a-ca
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142565 12 -   4669795 tc------------t-ta-------TGC-C-A-CA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46304 12 +     47900 tc------------t-ta-------tgc-c-a-ca
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1737 12 -     14410 tc------------t-ta-------tgc-c-a-ca
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46121 12 -    148725 tc------------t-ta-------tgc-c-a-ca
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28399 12 -     40656 tc------------t-ta-------tgc-c-a-ca
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8363 12 +     20796 tc------------t-ta-------tgc-c-a-ca
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13472 12 -     17524 tc------------t-ta-------tgc-c-a-ca
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29204 12 -     34525 tc------------t-ta-------tgc-c-a-ca
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12984 12 -     25376 tc------------t-ta-------tgc-c-a-ca
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365571 12 -  39242232 tc------------t-ta-------tgc-c-a-ca
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271298 12 +  21565898 tc------------t-ta-------tgc-c-a-ca
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33663 12 -     45857 tc------------t-ta-------tgc-c-a-ca
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28567 12 -     32606 tc------------t-ta-------tgc-c-a-ca
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4729 12 +      8499 tc------------t-ta-------tgc-c-a-ca
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27125 12 +     70610 tc------------t-ta-------tgc-c-a-ca
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24086 12 +     36323 tc------------t-ta-------tgc-c-a-ca
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13931 11 -     19938 tc------------t-t--------tgc-c-t-ca
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31940 11 -     33796 tt------------t-c--------tgc-c-a-ca
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6454 11 -     15404 tt------------t-c--------tgc-c-a-ta
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10197 12 -     32913 tc------------t-ta-------tgc-c-a-ca
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20610 12 -     40346 tc------------t-ta-------tgc-c-a-ca
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20865 12 +    216457 tc------------t-ta-------tgc-c-a-ca
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20654 12 +     39636 tc------------t-ta-------tgc-c-a-ca
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240021 11 -   2543920 tc------------t-t--------tgc-t-a-ta
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            317 12 +      1057 tc------------t-ta-------tgc-c-a-ca
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43720 12 -    112038 tc------------t-ta-------tgc-t-a-ca
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9271 12 +     34062 tc------------t-ta-------tgc-t-a-ca
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344987 12 +  18827391 tc------------t-ta-------tgc-c-a-ca
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11526 12 -     44032 tc------------t-ta-------tgc-c-a-ca
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306378 12 - 135778131 tc------------t-ta-------taC-C-A-CA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  194 11 +     10270 tc------------t-t--------tgc-c-a-ca
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607670 11 -    839153 tc------------t-t--------tgc-c-a-ca
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_2215791               358 11 -       558 ta------------c-t--------ttt-c-a-cg
i Chrysochloris_asiatica.ChrAsi_scaffold_2215791         I 101 n 23
s Colobus_angolensis.KN981557.1                             410786 12 -   2368649 tc------------t-ta-------TGC-C-A-CA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380667 12 - 200372422 tc------------t-ta-------tgc-c-a-ca
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4224 12 -     84244 tc------------t-ta-------tgc-c-a-ca
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4084 11 -      8242 tt------------t-t--------tgc-t-a-aa
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46140 11 -     83289 tt------------t-t--------tgc-t-a-ta
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117830 11 - 224834208 tc------------t-t--------tgc-t-g-ca
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              11054  9 +     12657 CA------------T-C--------TAG-C-A---
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5657 11 +     87169 gc------------t-t--------tgc-c-t-ca
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646696 12 -   1526836 tt------------t-t--------tttct-a-ta
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19862 11 +     50838 TT------------C-C--------TGT-T-A-CA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5594 11 +     36344 tc------------t-t--------tgt-c-a-ca
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29383 11 +     75252 tc------------t-t--------tgt-t-a-ca
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111298 11 -   2246927 tc------------t-t--------tgt-c-a-ca
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293857 11 +  12879189 tc------------t-t--------tgc-c-a-ca
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633221 11 -  35494412 tc------------t-t--------tgc-c-a-ca
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866587 11 -  20541912 tc------------t-t--------tgc-c-a-ca
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665773 11 -   1390856 tc------------t-t--------tgc-c-a-ca
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140573 11 -    198055 tc------------t-t--------tgc-c-a-ca
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100094 11 -    115145 tc------------t-t--------tac-c-a-ca
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951865 11 -  37912305 tc------------t-t--------tgc-c-a-ca
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6799 11 -     10735 TC------------T-T--------TGC-C-A-CA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856819 11 - 111700974 cC------------C-T--------TTT-C-A-TA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7571 11 +     19438 tc------------t-t--------tgc-c-a-ca
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241405 11 -    607251 tc------------t-t--------tgc-c-a-cc
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1227021 11 +  10337057 cc------------t-c--------gac-c-a-ca
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33676 11 +    110024 ac------------t-t--------tgc-t-g-ca
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15683 11 +     18970 tc------------t-t--------tgc-t-a-ca
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917402 11 +  41312741 tt------------t-t--------tgc-c-t-ca
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580180 11 +  14770903 tc------------t-t--------tgc-c-a-ca
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042718 11 -   4378816 tc------------t-t--------tgc-c-a-ga
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376656 11 +  39960074 tc------------t-t--------tgc-c-a-ga
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412638 11 -    498745 tc------------t-t--------tgc-c-a-ga
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667434 18 +   7059049 TC------------T-C-ACAAAGATGT-G-G-CA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264523 12 +  21539334 tc------------t-ta-------tgc-c-a-ca
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72429 11 -    133382 tc------------t-t--------tgc-c-a-ca
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               142 11 +     25849 tc------------t-t--------tgc-c-a-ca
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16073 11 -     24895 tc------------t-t--------tgc-c-a-ca
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43783 11 -     70999 tc------------t-t--------tgc-c-a-ca
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87753 11 +    112731 tc------------t-t--------tgc-c-a-ca
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44316 11 +     68309 tc------------t-t--------tgc-c-a-ca
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54640 11 -     65740 tc------------t-t--------tgc-c-a-ca
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25273 11 -     75513 tc------------t-t--------tgc-c-a-ca
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49467 11 -     97555 tc------------t-t--------tgc-c-a-ca
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6191 11 +     30972 tc------------t-t--------tgc-c-a-ca
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43911 11 -     52037 tc------------t-t--------tgc-c-a-ca
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60314 11 -    111500 tc------------t-t--------tgc-c-a-ca
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248114 11 - 206538554 gt------------t-t--------tgc-c-t-ca
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117900 11 - 205367284 GT------------T-T--------TGC-C-T-CA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 29000 11 -     30238 GT------------T-T--------TGC-C-T-CA
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923238 11 -   3816255 tc------------t-t--------tgt-t-a-ca
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126894 11 -    137831 tc------------t-t--------tgc-c-a-ta
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10439 11 +     22493 tc------------t-t--------tgc-c-a-ta
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22522 11 -     32986 tc------------t-t--------tgc-c-a-ca
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2452 11 -     28519 tc------------t-t--------tgc-c-a-ca
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93122 11 -     95226 tc------------t-t--------tgc-c-a-cc
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2600 11 -      6791 tc------------t-t--------cat-t-g-ca
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_420802                                 758 12 -      1361 TC------------T-TA-------TAC-C-A-CA
i Gorilla_beringei.k141_420802                           C 0 I 112
s Gorilla_gorilla.LT578341.1                                257637 12 - 186649187 tc------------t-ta-------tac-c-a-ca
i Gorilla_gorilla.LT578341.1                             I 849 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3666 11 -     78134 tc------------t-t--------tgt-t-g-ca
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          15998 11 -     40692 tc------------t-t--------tgc-c-a-ca
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37397 11 +     49394 tc------------t-t--------tgc-c-a-ca
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62268 11 -     66874 tc------------t-t--------tgc-c-a-ca
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11139 11 -     42923 tc------------t-t--------tgc-c-a-ca
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18141 11 -     53142 tc------------t-t--------tgc-c-a-ca
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32090 11 -    327341 gc------------t-t--------tgc-c-t-ca
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10788 11 +     48891 tc------------t-t--------tgc-t-a-cc
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933660 11 -  22651954 cc------------t-t--------tgt-t-g-ca
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1530 11 +      8654 cc------------a-t--------tac-c-a-ca
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8931 11 -     36432 tc------------t-t--------tgc-c-a-ca
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552928 11 -   1711038 tt------------t-t--------tgc-c-c-aa
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2365 11 -      2730 tt------------t-t--------tgc-c-c-aa
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144097 12 -    630532 tc------------t-ta-------tac-c-a-ca
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71463 11 +     83186 gc------------t-t--------tgc-c-t-ca
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73080 11 +    143317 tc------------t-t--------tgt-t-a-cg
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7142 12 +     12352 tc------------t-ta-------tac-c-a-ca
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14326 12 +     55766 tc------------t-ta-------tac-c-a-ca
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053926 12 + 191637585 tc------------t-ta-------tgc-c-a-ca
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802804 12 +  11177569 tc------------t-ta-------tgc-c-a-ca
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8413 11 -    135385 tc------------t-t--------tgt-t-a-ct
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388139  7 +   7955117 tc------------t-t--------tgc-------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Indri_indri.k141_2415743                                    3687 11 +     11955 tc------------t-t--------tgc-c-a-ca
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11324 11 -     16823 tg------------t-t--------tgc-c-a-ca
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241322 12 +   9596543 tt-----------tt-t--------tgc-c-a-ca
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73164 11 -     97402 tc------------t-t--------tgc-c-a-ca
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44546 12 +    110728 tc------------t-ta-------tgc-c-a-ca
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64478 11 -     65777 tc------------t-t--------tgc-c-a-ca
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760795 11 +  30322482 tc------------t-t--------tgc-c-a-ca
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5453 12 -     13097 tc------------t-ta-------tgc-c-a-ca
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5207 12 +      5940 tc------------t-ta-------tgc-c-a-ca
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5030 12 -      5717 tc------------t-tA-------TGC-C-A-CA
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      183 12 +      8855 TC------------T-TA-------TGC-C-A-CA
i Leontopithecus_chrysomelas.k141_3286424                N 0 C 0
s Leontopithecus_rosalia.k141_1583055                         4985 12 -     13645 TC------------T-TA-------TGC-C-A-CA
i Leontopithecus_rosalia.k141_1583055                    N 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10311 11 +     29618 tc------------t-t--------tac-c-a-ca
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10307 11 +     31569 tc------------t-t--------tac-c-a-ca
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10317 11 +     24756 tc------------t-t--------tac-c-a-ca
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10317 11 +     16388 tc------------t-t--------tac-c-a-ca
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814793 11 -   3914936 tc------------t-t--------tgc-c-t-ca
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342509 11 +    662738 tc------------t-t--------tgc-c-a-ca
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335450 12 -   1826925 tc------------t-ta-------tgc-c-a-ca
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12606 11 +     19643 tc------------t-t--------tgc-c-a-ca
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046276 11 -   6120653 tc------------t-t--------tgc-c-a-ca
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086194 11 +  43346337 ac------------t-t--------tac-c-a-ca
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615829 11 +  59628241 tc------------t-t--------tgc-c-t-ca
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46839 12 -     61512 tc------------t-ta-------tgc-c-a-ca
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374501 12 -  60120075 tc------------t-ta-------tgc-c-a-ca
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26769 12 +     30207 tc------------t-ta-------tgc-c-a-ca
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1607 12 -      5035 tc------------t-ta-------tgc-c-a-ca
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26722 12 +     30527 tc------------t-ta-------tgc-c-a-ca
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37898 12 -     50087 tc------------t-ta-------tgc-c-a-ca
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47642 12 +     51645 tc------------t-ta-------tgc-c-a-ca
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416845 12 - 187317192 tc------------t-ta-------TGC-C-A-CA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401075 12 +  25927173 tc------------t-ta-------TGC-C-A-CA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50247 12 -     62418 tc------------t-ta-------tgc-c-a-ca
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2778 12 +     14901 tc------------t-ta-------tgc-c-a-ca
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46719 12 +     59329 tc------------t-ta-------tgc-c-a-ca
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272627 12 +    668171 tc------------t-ta-------tgc-c-a-ca
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1259 12 -      5049 tc------------t-ta-------tgc-c-a-ca
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4425 12 +     17132 tc------------t-ta-------tgc-c-a-ca
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224553 11 -    270270 tc------------t-t--------tgc-c-a-ca
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323915 12 +  24302211 tc------------t-ta-------tgc-c-a-ca
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358746 12 -    752769 tc------------t-ta-------tgc-c-a-ca
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674835 11 -    737560 tc------------t-t--------tgc-c-a-tc
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222135 11 +    317179 tc------------t-t--------tgc-c-g-ta
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502353  7 +  40650429 tc------------t-t--------tgc-------
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                       151706 11 +    207569 tt------------t-g--------tgc-c-t-ga
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27521 11 -     74585 tt------------t-t--------tgt-c-t-ca
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52102 11 -    140813 tc------------t-t--------tgc-t-g-ca
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88793 11 +     93471 tc------------t-t--------tgc-c-a-ca
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11575 12 +     17804 tc------------t-ta-------tgc-c-a-ca
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12075 12 -     12984 tc------------t-ta-------tgc-c-a-ca
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20394 12 -     26561 tc------------t-ta-------tgc-c-a-ca
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986149 11 +  93316391 tt------------t-t--------tgc-c-c-CA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    47992 11 +    145209 cc------------c-c--------ctt-c-a-ca
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186377 11 +    200668 tc------------t-t--------tgc-c-a-ca
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965132 11 +  27267610 tc------------t-t--------tgc-t-g-ca
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364529 11 -   8254450 tc------------t-t--------tgc-c-a-ca
i Miniopterus_natalensis.LDJU01000034.1                  I 4 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43449 11 -     48117 tc------------t-t--------tgc-c-a-ca
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24015 12 -     27822 tc------------t-ta-------tgc-c-a-ca
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9804 11 +     27589 TC------------T-T--------TGC-C-T-CA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53924 11 -     62432 tt------------g-t--------tgc-c-a-ca
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360898 11 +    437263 TC------------T-T--------TGC-C-A-CA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180622 11 +    366855 tc------------t-t--------tgc-c-t-ca
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27233 11 -     82753 cc------------t-t--------tgc-c-a-cc
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19824 11 -     63510 gc------------t-t--------tgc-c-t-ca
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42482 11 +     47283 tc------------t-t--------tgc-c-c-aa
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596302 11 + 120012414 tc------------t-t--------tgc-t-g-CA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689499 11 + 129401213 tc------------t-t--------tgc-t-a-ca
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217841 11 +  89631738 tc------------t-T--------TGT-T-G-CA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498784 11 + 130317789 tc------------t-t--------tgc-t-a-ca
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85504 11 -     86153 tc------------t-t--------tgt-t-g-ca
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356419 11 +  14710649 TT------------T-T--------TGC-C-T-GA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64379 11 +     67721 tc------------t-g--------tgt-t-a-ca
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794744 11 +  10118263 tc------------t-t--------tgc-c-a-ca
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388919 11 +   6019432 tc------------t-t--------tgc-c-a-cc
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384947 11 +   4330536 tc------------t-t--------tgc-c-a-ca
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3732 11 +     18357 tc------------t-t--------tgc-c-a-ca
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121079 11 +    130748 tc------------c-t--------tgc-c-a-ca
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             947999 11 +   3037898 tc------------t-t--------tgt-c-C-CA
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30737 12 +     34575 tc------------t-ta-------tgc-c-a-ca
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233564 11 -   7148211 tc------------t-t--------tgc-c-a-ca
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129233 11 -    149072 tc------------t-t--------tgc-c-a-ca
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55028 12 -    132029 tc------------t-ta-------tac-c-a-ca
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11123 12 -     16345 tc------------t-ta-------tac-c-a-ca
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17008 12 +     22201 tc------------t-ta-------tac-c-a-ca
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415229 12 -  22158432 tc------------t-ta-------tac-c-a-ca
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27406 12 -     54323 tc------------t-ta-------tac-c-a-ca
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199425 11 +   9404916 tc------------t-t--------tgc-c-t-ca
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639499 11 + 196305487 tc------------t-t--------tgc-c-a-ca
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             2102 11 -      9413 tc------------t-t--------tgc-c-a-ca
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566882 11 - 199412804 tc------------t-t--------tgc-c-a-ca
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558190  9 -   3988456 ta------------t-t--------t---t-g-ca
i Ochotona_princeps.JH802162.1                           C 0 I 1
s Octodon_degus.JH651603.1                                11056469 11 -  11899542 tc------------t-t--------tgt-t-a-ca
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453222 11 +   2017862 tc------------t-a--------tgc-c-t-ca
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         438320 11 -    630418 tc------------t-t--------tgc-c-a-cc
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16204 11 +    150152 tc------------t-t--------tgc-c-a-cc
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95803 11 -    140218 tc------------t-t--------tgc-T-G-CA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6349 11 -     41509 tc------------t-t--------cgc-t-g-ca
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8103967 11 +  10937097 tc------------t-t--------tgc-c-a-ca
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1264 11 +     11607 cc------------t-t--------tag-c-a-ca
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40471 11 +    559221 tc------------t-t--------tgc-c-t-ca
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        42053 11 -     51505 tc------------t-t--------tgc-c-a-ta
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             355058 11 +   1103335 tc------------t-t--------tgc-c-a-ta
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405915 11 -  44047080 tc------------t-t--------tgc-t-a-cc
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6434 11 +     17875 tc------------t-t--------tgc-t-a-cc
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001033.1                                  380 12 +      1169 TC------------T-TA-------TAC-C-A-CA
i Pan_paniscus.AJFE02001033.1                            C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             15368 13 -     26668 tc------------t-TA-------TAC-C-AACA
i Pan_troglodytes.NBAG03003091.1                         I 1653 I 64
s Panthera_onca.PanOnc_flattened_line_3271                   25823 11 -    230217 gt------------t-t--------tgc-c-t-ca
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463149 11 -  18783137 gt------------t-t--------tgc-c-t-ca
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973808 11 +   8748460 gt------------t-t--------tgc-c-t-ca
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617440 11 +   2937107 tc------------t-t--------tgc-t-a-cc
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244924 12 - 183742232 tc------------t-ta-------tgC-C-A-CA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11209 12 +     21308 tc------------t-ta-------tgc-c-a-ca
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293952 12 -  20919399 tc------------t-ta-------tgc-c-a-ca
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23857 12 -     27687 tc------------t-ta-------tgc-c-a-ca
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     528 12 +     10553 tc------------t-ta-------tgc-c-a-ca
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   488 12 -     10386 tc------------t-ta-------tgc-c-a-ca
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16404 11 +     78924 gt------------t-t--------tac-c-t-ta
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28385 11 +     31479 tc------------t-t--------tgc-c-a-ca
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20753 11 -     24908 tc------------t-t--------tgc-c-a-ca
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3205 12 +      9367 tt-----------tt-t--------tgt-c-a-ca
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249567 12 +  18517816 tc------------t-t--------tgc-ctc-cc
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33241 11 -     56120 tc------------t-t--------tgt-c-a-ca
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5492 11 -     63832 tc------------t-t--------tgc-c-a-ca
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            4174 12 +     55023 tc------------t-ta-------tgc-c-a-ca
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3644 12 -     89929 tc------------t-ta-------tgc-c-a-ca
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4234 12 +     40849 tc------------t-ta-------tgc-c-a-ca
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255909 12 +  14605196 tc------------t-ta-------TGC-C-A-CA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5315 11 +     22231 tc------------t-t--------tgc-c-a-ca
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66088 12 +    207309 tc------------t-ta-------tgc-t-a-ca
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7176 12 -     25401 tc------------t-ta-------tgc-t-a-ca
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32924 12 +     58159 tc------------t-ta-------tgc-t-a-ca
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33200 12 +     63561 tc------------t-ta-------tgc-t-a-ca
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32960 12 +     51148 tc------------t-ta-------tgc-t-a-ca
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557930 12 -   4542175 tc------------t-ta-------tgc-t-a-ca
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32944 12 +     51125 tc------------t-ta-------tgc-t-a-ca
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2509 11 +     19503 TC------------T-T--------TGC-C-A-CA
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9362 12 +     39866 tc------------t-ta-------tgc-c-a-ca
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4444 12 -      9282 tc------------t-ta-------tgc-c-a-ca
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43848 12 -     87950 tc------------t-ta-------tgc-c-a-ca
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44242 12 -     88961 tc------------t-ta-------tgc-c-a-ca
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8940 12 -     39403 tc------------t-ta-------tgc-c-a-ca
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43891 12 +     87928 tc------------t-ta-------tgc-c-a-ca
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8939 12 -     60166 tc------------t-ta-------tgc-c-a-ca
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15876 12 -     67232 tc------------t-ta-------tgc-c-a-ca
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43792 12 -     90634 tc------------t-ta-------cgc-c-a-ca
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45259 12 +     89403 tc------------t-ta-------tgc-c-a-ca
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   180785 12 - 189387572 tc------------T-TA-------TAC-C-A-CA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195525 12 -   9816681 TC------------T-TA-------TAC-C-A-CA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29319 12 +     69807 tc------------t-ta-------tgc-c-a-ca
i Presbytis_comata.k141_1230337                          I 186 C 0
s Presbytis_mitrata.k141_584736                              46500 12 -     80239 tc------------t-ta-------tgc-c-a-ca
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5521 11 +      7663 cc------------g-t--------tac-c-a-ca
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983943 11 +   4620579 tc------------t-t--------tgc-c-A-CA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567438 11 -   2598838 tc------------t-t--------tgc-c-A-CA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5076 11 -      7103 tc------------t-t--------tgc-c-a-ca
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5673 11 -     11706 tc------------t-t--------tgc-c-a-ca
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9410 11 -     30655 tc------------t-t--------tgc-c-a-ca
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35724 11 +     46564 tc------------t-t--------tgc-c-a-ca
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96003 11 -     98465 tc------------t-t--------tgc-c-a-ca
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9642 11 +     35169 tc------------t-t--------tgc-c-a-ca
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39627 11 +     52041 tc------------t-t--------tgc-t-g-ca
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53515 11 -     66298 tc------------g-t--------tgc-c-a-cc
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          5999 11 -     18639 tt------------t-t--------tgc-c-t-ca
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842124 11 -  28871421 tc------------t-t--------tgc-c-a-ca
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538639 11 -   4952924 tc------------t-t--------tgc-c-a-ca
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100463 11 +  38429054 gt------------t-t--------tgc-c-t-ca
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28686 12 +     91421 tc------------t-ta-------tgc-c-a-ca
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155238 12 -   7812017 tc------------t-ta-------tgc-c-a-ca
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9543 12 +     72585 tc------------t-ta-------tgc-c-a-ca
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   365 11 -     55207 tc------------t-t--------tgc-c-a-cc
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37024507  4 -  90668790 tc------------t-t------------------
i Rattus_norvegicus.chr16                                C 0 I 126
s Rhinolophus_sinicus.LVEH01000134.1                       2916078 11 +   3329780 tt------------t-t--------tgc-c-c-aa
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3205 12 +      7119 tc------------t-ta-------tgc-c-a-ca
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123820 12 + 195417433 tc------------t-ta-------TGC-C-A-CA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238047 12 -   7961872 tc------------t-ta-------tgc-c-a-ca
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76624 11 -    116970 tc------------t-t--------tgc-c-a-ca
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                317 12 -      1130 tc------------t-ta-------tgc-c-a-ca
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5219 12 +      6077 tc------------t-ta-------ggc-c-a-ca
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5313 12 +      5971 tc------------t-ta-------tgc-c-a-ca
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5230 12 +      5932 tc------------t-ta-------tgc-c-a-ca
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3575 12 -      4390 tc------------t-ta-------tgc-c-a-ca
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393332 12 - 209938924 tc------------t-ta-------tgc-c-a-ca
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5178 12 +      5979 tc------------t-ta-------tgc-c-a-ca
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1748 12 -     22275 tc------------t-ta-------tgc-c-a-ca
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9603 11 +     16473 tc------------t-t--------tgc-c-a-cc
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110341 12 + 121099817 TC------------T-TA-------TGC-C-A-CA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31908 12 -     47369 tc------------t-ta-------tgc-c-a-ca
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32294 12 -     79414 tc------------t-ta-------tgc-c-a-ca
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28985 12 -     34454 tc------------t-ta-------tgc-c-a-ca
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16386 12 -     22428 tc------------t-ta-------tgc-c-a-ca
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31540 12 -     47109 tc------------t-ta-------tgc-c-a-ca
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239592 12 +   5703754 tc------------t-ta-------tgc-c-a-ca
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9182 12 +     21866 tc------------t-ta-------tgc-c-a-ca
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26870 12 +     27374 tc------------t-ta-------tgc-c-a-ca
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30518 12 +     58920 tc------------t-ta-------tgc-c-a-ca
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17016 12 -     45317 tc------------t-ta-------tgc-c-a-ca
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24674 12 -     42441 tc------------t-ta-------tgc-c-a-ca
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27352 12 -     29113 TC------------T-TA-------TGC-C-A-CA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30427 12 -     48123 tc------------t-ta-------tgc-c-a-ca
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51361 11 +     77746 gc------------t-t--------tgc-t-g-ca
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865471 11 -   1910179 tc------------t-t--------tgt-t-a-ca
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672561  9 +  18376816 TA------------T-C--------TGG-T-A---
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869717  7 +   3870691 tc------------t-t--------tgc-------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525              8074 11 -     97271 tc------------t-t--------tgc-c-t-ca
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126241 11 +    196729 gc------------t-t--------tgc-c-t-ca
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645278 11 +  69701581 tc------------t-t--------tgc-c-c-ca
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392494 12 +   1523678 tc------------t-ta-------tac-c-a-ca
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15655 11 +     22964 ta------------t-t--------tgc-c-a-ca
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4071 11 +      5583 tc------------c-t--------tgc-c-a-ca
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192965 11 +    199430 tc------------t-t--------tgc-c-a-ca
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106933 11 -    539355 tc------------t-t--------tgc-c-a-ca
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                2007 11 +      9917 tc------------t-t--------tac-c-a-ca
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8805 11 +     20590 tc------------t-t--------tac-c-a-ca
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354733 12 - 186847797 tc------------t-ta-------TGC-C-A-CA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25394 11 -     33621 tg------------t-t--------tgt-c-a-ca
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21027 11 -     31044 tc------------t-t--------tgc-c-a-ca
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481507 11 -    610378 tc------------t-t--------tgc-c-a-ca
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22483 12 +     26378 tc------------t-ta-------tgc-c-a-ca
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35227 12 -     78344 tc------------t-ta-------tgc-c-a-ca
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21808 12 +     25722 tc------------t-ta-------tgc-c-a-ca
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30183 12 -     62838 tc------------t-ta-------tgt-c-a-ca
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30227 12 +     46913 tc------------t-ta-------tgc-c-a-ca
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10966 12 -     28527 tc------------t-ta-------tgc-c-a-ca
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32118 12 -     64340 tc------------t-ta-------tgc-c-a-ca
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30156 12 -     63452 tc------------t-ta-------tgc-c-a-ca
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11603 12 +     22490 tc------------t-ta-------tgt-c-a-ca
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5026 12 -      6147 tc------------t-ta-------tgc-c-a-ca
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11939 12 -     13050 tc------------t-ta-------tgc-c-a-ca
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257101 12 -   6242583 tc------------t-ta-------tgc-c-a-ca
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3197 12 +     19340 tc------------t-ta-------tgc-c-a-ca
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175216 11 -    200418 tc------------t-t--------ttc-c-a-ca
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482884 10 -  10818551 -c------------t-t--------tac-c-a-ca
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836425 11 -   4065304 tc------------t-t--------tgc-t-g-ca
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10460 11 -     70247 tc------------t-t--------tgt-t-g-ca
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367092 11 -  33153633 tc------------t-t--------tgc-c-a-ca
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4873 23 -     21056 TTTCATCCAGCAAAT-A--------TGT-A-A-CA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 4
s Ursus_maritimus.KK499267.1                                183442 11 +   5085361 tc------------t-t--------tgc-a-t-ca
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26596 11 -     30710 tc------------t-t--------tgc-c-a-ca
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25503 11 -    147434 tc------------t-t--------tgc-c-a-ca
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77622 11 +   5488506 tc------------t-t--------tgc-t-a-ca
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106194 11 -    112863 tc------------t-t--------tgc-c-t-ca
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175469 11 -    224448 tc------------t-t--------tgc-c-a-ca
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30434 11 -     86975 tc------------t-t--------tgc-c-t-ca
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1272 12 -      1899 TTT-----------T-T--------TGC-C-A-CA
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955  0 +    313613 C
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Condylura_cristata.JH655891.1                           35808250  0 +  53390261 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       8334 4 +     36723 ga-a-C
s Acinonyx_jubatus.LLWD01001279.1                           814215 4 +   1699592 ac-a-c
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27474 4 +     63021 AA-C-T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416676 4 +  29979442 ac-a-c
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            217001 4 +    347723 ac-a-c
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19847 4 -     61208 aa-g-t
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 2
s Allenopithecus_nigroviridis.k141_3755588                   49497 4 +     53615 aa-a-c
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1528 4 +     13857 aa-a-c
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18079 4 -     21945 aa-a-c
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19764 4 +     32033 aa-a-c
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73542 4 -     84148 aa-a-c
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45781 4 -     78289 aa-a-c
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45220 4 +     55831 aa-a-c
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43670 4 -     64179 aa-a-c
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            777 4 -      3959 aa-a-c
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42295 4 +     45454 aa-a-c
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47944 4 +     70886 aa-a-c
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10117 4 +     30854 aa-a-c
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34251 4 +     42133 aa-a-c
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587059 4 +   2318259 ac-a-c
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178482 4 -    412891 ac-a-c
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52136 4 -     68529 ac-a-c
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2509 4 +     17741 aa-a-c
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3134 4 -     15923 aa-a-c
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673416 4 +   5030052 AA-A-C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3410 4 -     16391 aa-a-c
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2969 4 -     17186 aa-a-c
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      17482 4 -     32367 AT-T-T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 7376
s Arctocebus_calabarensis.k141_1364444                       21541 4 -     45910 ac-a-c
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6739 4 -     15198 gc-a-t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276007 4 +  21539123 aa-a-c
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12174 4 +     48076 aa-a-c
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7309 4 -     28759 aa-a-c
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34864 4 +     44353 aa-a-c
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50234 4 -     71267 aa-a-c
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24292 4 -     33135 aa-a-c
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7555 4 +     11645 ac-a-c
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7563 4 -     19611 ac-a-c
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964826 4 -  23207421 ac-a-c
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1326 4 -     25979 ac-a-c
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88065 4 +    124022 ac-a-t
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 1
s Bison_bison.KN261452.1                                     23596 4 +    288883 ac-a-c
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20357986 4 +  48749331 ac-a-c
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756550 4 +   1948126 ac-a-c
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546692 4 -  45695690 ac-a-c
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531700 4 -   4408762 ac-a-c
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9101 4 +     28062 AA-A-C
i Cacajao_ayresi.k141_96119                              C 0 I 2
s Cacajao_calvus.k141_89051                                  44395 4 -     91139 AA-A-C
i Cacajao_calvus.k141_89051                              C 0 I 2
s Cacajao_hosomi.k141_81245                                  21921 4 +     95584 AA-A-C
i Cacajao_hosomi.k141_81245                              C 0 I 2
s Cacajao_melanocephalus.k141_619699                         21834 4 +    119600 AA-A-C
i Cacajao_melanocephalus.k141_619699                     C 0 I 2
s Callibella_humilis.k141_1233062                            11489 4 +     18648 aa-g-c
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11005 4 -     13885 aa-a-c
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3091 4 -      8861 aa-g-c
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455483 4 + 189096842 AA-G-C
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3006 4 +      8664 aa-g-c
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632297 4 +  17673402 ac-c-c
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666584 4 +   7040546 ac-c-c
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210242 4 +   1652518 ac-c-c
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506571 4 +  60362399 ac-a-c
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10207 4 -     23171 ac-a-c
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223550 4 +   9314153 ac-a-c
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616685 4 +  59632846 ac-a-c
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108266 4 -  63665305 ac-a-c
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410788 4 -  46296322 ac-a-c
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26593062 4 +  44709034 ac-a-c
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    802 4 -      1607 AT-A-G
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272105 1 +    496798 A-----
i Carlito_syrichta.NW_007259797.1                        I 313 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1609 4 +      9923 gc-a-c
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28965 4 -     39886 at-a-g
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80892 4 -    217609 ac-a-c
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 3
s Cavia_aperea.AVPZ01000300.1                              4997699 4 +  23392119 ac-a-g
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001141 4 +  23407841 ac-a-g
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64220 4 -     66877 ac-a-g
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6404 4 -     12580 aa-g-c
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44462 4 +     53515 aa-g-c
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374230 4 -  26074798 aa-a-c
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9284 4 -     34880 aa-a-c
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68380 4 -     89041 aa-a-c
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4065 1 -      5494 a-----
i Cephalopachus_bancanus.k141_1689090                    I 312 C 0
s Ceratotherium_simum.JH767749.1                          15493512 4 -  27778364 ac-a-c
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20345 4 +     27315 ac-a-c
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142577 4 -   4669795 AA-A-C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46316 4 +     47900 aa-a-c
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1749 4 -     14410 aa-a-c
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46133 4 -    148725 aa-a-c
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28411 4 -     40656 aa-a-c
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8375 4 +     20796 aa-a-c
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13484 4 -     17524 aa-a-c
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29216 4 -     34525 aa-a-c
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           12996 4 -     25376 aa-a-c
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365583 4 -  39242232 aa-a-c
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271310 4 +  21565898 aa-a-c
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33675 4 -     45857 aa-a-c
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28579 4 -     32606 aa-a-c
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4741 4 +      8499 aa-a-c
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27137 4 +     70610 aa-a-c
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24098 4 +     36323 aa-a-c
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13942 4 -     19938 gc-a-c
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31951 4 -     33796 ac-a-c
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6465 4 -     15404 ac-a-c
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10209 4 -     32913 aa-c-c
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20622 4 -     40346 aa-c-c
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20877 4 +    216457 aa-c-c
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20666 4 +     39636 aa-c-c
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240032 4 -   2543920 ac-a-g
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            329 4 +      1057 aa-a-c
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43732 4 -    112038 aa-a-c
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9283 4 +     34062 aa-a-c
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                344999 4 +  18827391 aa-a-c
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11538 4 -     44032 aa-a-c
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306390 4 - 135778131 AA-A-C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  205 4 +     10270 ac-a-c
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607681 4 -    839153 ac-a-c
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                 10 4 -      4087 AT-C-T
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          n 23 C 0
s Colobus_angolensis.KN981557.1                             410798 4 -   2368649 AA-A-C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380679 4 - 200372422 aa-a-c
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4236 4 -     84244 aa-a-c
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4095 4 -      8242 ac-a-c
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46151 4 -     83289 ac-A-T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 2
s Cricetulus_griseus.LT883664.1                          213117841 4 - 224834208 a--AAA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              11063 3 +     12657 -A-A-T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5668 4 +     87169 at-g-c
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646708 4 -   1526836 at-g-c
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19873 4 +     50838 AC-A-A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5605 4 +     36344 ac-a-g
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29394 4 +     75252 ac-a-g
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111309 4 -   2246927 gc-a-c
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293868 4 +  12879189 aa-a-c
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633232 4 -  35494412 ac-a-c
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866598 4 -  20541912 ac-a-c
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665784 4 -   1390856 ac-a-c
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140584 4 -    198055 ac-a-c
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100105 4 -    115145 cc-a-g
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951876 4 -  37912305 at-a-a
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6810 4 -     10735 AT-A-A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856830 4 - 111700974 AT-C-T
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7582 4 +     19438 gc-a-c
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241416 4 -    607251 ac-g-c
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1227032 4 +  10337057 ac-a-a
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33687 3 +    110024 g--a-a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 3
s Ellobius_talpinus.LOJH01026522.1                           15694 3 +     18970 g--a-a
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 3
s Enhydra_lutris.KZ291758.1                               24917413 4 +  41312741 at-a-c
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580191 4 +  14770903 ac-a-c
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042729 4 -   4378816 ac-a-c
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376667 4 +  39960074 ac-a-c
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412649 4 -    498745 ac-a-c
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667452 4 +   7059049 AA-A-T
i Erinaceus_europaeus.JH835339.1                         C 0 I 2
s Erythrocebus_patas.Contig38                               264535 4 +  21539334 aa-a-c
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72440 4 -    133382 ac-a-c
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               153 4 +     25849 ac-a-c
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16084 4 -     24895 ac-a-c
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43794 4 -     70999 ac-a-c
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87764 4 +    112731 ac-a-c
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44327 4 +     68309 ac-a-c
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54651 4 -     65740 ac-a-c
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25284 4 -     75513 ac-a-c
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49478 4 -     97555 ac-a-c
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6202 4 +     30972 ac-a-c
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43922 4 -     52037 ac-a-c
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60325 4 -    111500 ac-a-c
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248125 4 - 206538554 ac-a-c
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117911 4 - 205367284 AC-A-c
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 29011 4 -     30238 AC-A-C
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923249 4 -   3816255 ac-a-c
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126905 4 -    137831 ac-a-c
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10450 4 +     22493 ac-a-c
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22533 4 -     32986 ac-a-c
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2463 4 -     28519 gc-a-c
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93133 4 -     95226 ac-a-c
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2611 4 -      6791 ac-a-c
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3586045                              19220 4 -     19819 GA-A-C
i Gorilla_beringei.k141_3586045                          n 112 C 0
s Gorilla_gorilla.LT578341.1                                257649 4 - 186649187 ga-a-c
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3677 4 -     78134 gc-a-c
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16009 4 -     40692 ac-a-c
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37408 4 +     49394 ac-a-c
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62279 4 -     66874 ac-a-c
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11150 4 -     42923 ac-a-c
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18152 4 -     53142 ac-a-c
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32101 4 -    327341 ac-a-c
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10799 4 +     48891 ac-a-c
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933671 4 -  22651954 ac-a-c
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1541 4 +      8654 gt-a-t
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8942 4 -     36432 ac-a-c
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552939 4 -   1711038 ac-a-c
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 4
s Hipposideros_galeritus.HipGal_scaffold_164997               2376 4 -      2730 ac-a-c
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 4
s Hoolock_leuconedys.ctg274                                    144109 4 -    630532 aa-a-c
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71474 4 +     83186 at-g-c
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73091 4 +    143317 ac-a-g
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7154 4 +     12352 aa-a-c
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14338 4 +     55766 aa-a-c
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053938 4 + 191637585 aa-a-c
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802816 4 +  11177569 aa-a-c
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8424 4 -    135385 ac-a-c
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388149 3 +   7955117 at-g--
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Indri_indri.k141_2415743                                    3698 4 +     11955 ac-a-c
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11335 4 -     16823 ac-a-c
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241334 4 +   9596543 aa-g-t
i Jaculus_jaculus.JH725527.1                             C 0 I 2
s Kogia_breviceps.KogBre_flattened_line_3970                 73175 4 -     97402 ac-a-c
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44558 4 +    110728 aa-a-c
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64489 4 -     65777 ac-a-c
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760806 4 +  30322482 ac-a-c
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5465 4 -     13097 aa-a-c
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5219 4 +      5940 aa-a-c
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5042 4 -      5717 AA-A-C
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      195 4 +      8855 AA-A-C
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         4997 4 -     13645 AA-A-C
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10322 4 +     29618 ac-a-c
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10318 4 +     31569 ac-a-c
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10328 4 +     24756 ac-a-c
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10328 4 +     16388 ac-a-c
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814804 4 -   3914936 ac-a-c
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342520 4 +    662738 ac-a-c
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335462 4 -   1826925 aa-a-c
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12617 4 +     19643 ac-a-c
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046287 4 -   6120653 ac-a-c
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086205 4 +  43346337 at-a-c
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615840 4 +  59628241 ac-a-c
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46851 4 -     61512 aa-a-c
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374513 4 -  60120075 aa-a-c
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26781 4 +     30207 aa-a-c
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1619 4 -      5035 aa-a-c
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26734 4 +     30527 aa-a-c
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37910 4 -     50087 aa-a-c
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47654 4 +     51645 aa-a-c
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416857 4 - 187317192 AA-A-C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401087 4 +  25927173 AA-A-C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50259 4 -     62418 aa-a-c
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2790 4 +     14901 aa-a-c
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46731 4 +     59329 aa-a-c
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272639 4 +    668171 aa-a-c
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1271 4 -      5049 aa-a-c
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4437 4 +     17132 aa-a-c
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224564 4 -    270270 ac-a-c
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323927 4 +  24302211 aa-a-c
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358758 4 -    752769 aa-a-c
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674846 4 -    737560 ac-a-g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222146 4 +    317179 ac-a-g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502363 3 +  40650429 at-g--
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151717 4 +    207569 ac-a-c
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27532 4 -     74585 at-a-c
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52113 4 -    140813 aa-a-a
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 3
s Mesoplodon_bidens.MesBid_scaffold_6114                     88804 4 +     93471 ac-a-c
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11587 4 +     17804 aa-g-c
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12087 4 -     12984 aa-g-c
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20406 4 -     26561 aa-g-c
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986160 4 +  93316391 AC-A-C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48003 4 +    145209 at-c-t
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186388 4 +    200668 aa-a-c
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965143 3 +  27267610 a--A-A
i Microtus_ochrogaster.CM001695.1                        C 0 I 3
s Miniopterus_natalensis.LDJU01000034.1                    6364540 4 -   8254450 ac-a-c
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43460 4 -     48117 ac-a-c
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24027 4 -     27822 aa-a-c
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9815 4 +     27589 AC-A-C
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53935 4 -     62432 ac-a-c
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360909 4 +    437263 AC-A-C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180633 4 +    366855 ac-a-c
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27244 4 -     82753 ac-a-c
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19835 4 -     63510 ac-a-c
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42493 4 +     47283 ac-a-c
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596313 5 + 120012414 AAAA-A
i Mus_caroli.LT608237.1                                  C 0 I 2
s Mus_musculus.chr8                                       41689510 4 + 129401213 aA-A-A
i Mus_musculus.chr8                                      C 0 I 2
s Mus_pahari.LT608297.1                                   58217852 5 +  89631738 AAAA-A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498795 4 + 130317789 aA-A-A
i Mus_spretus.CM004101.1                                 C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_12866             85515 4 -     86153 ac-a-c
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356430 4 +  14710649 AT-A-C
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64390 4 +     67721 ac-a-g
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794755 4 +  10118263 ac-a-c
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388930 4 +   6019432 ac-a-c
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384958 4 +   4330536 ac-a-c
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3743 4 +     18357 ac-a-c
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121090 4 +    130748 ac-a-c
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             948010 1 +   3037898 A-----
i Nannospalax_galili.KL204047.1                          C 0 I 3
s Nasalis_larvatus.k141_1350636                              30749 4 +     34575 aa-a-c
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233575 4 -   7148211 ac-a-c
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129244 4 -    149072 ac-a-t
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55040 4 -    132029 aa-a-c
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11135 4 -     16345 aa-a-c
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17020 4 +     22201 aa-a-c
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415241 4 -  22158432 aa-a-c
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27418 4 -     54323 aa-a-c
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199436 4 +   9404916 ac-a-c
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639510 4 + 196305487 ac-a-c
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             2113 4 -      9413 ac-a-c
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566893 4 - 199412804 ac-a-c
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558200 4 -   3988456 GG-A-C
i Ochotona_princeps.JH802162.1                           I 1 C 0
s Octodon_degus.JH651603.1                                11056480 4 -  11899542 ac-a-g
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453233 4 +   2017862 ac-a-c
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         438331 4 -    630418 ac-a-c
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16215 4 +    150152 ac-a-c
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95814 3 -    140218 a--a-a
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_28377                    6360 3 -     41509 a--A-A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 3
s Orcinus_orca.KB316932.1                                  8103978 4 +  10937097 ac-a-c
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1275 4 +     11607 at-a-t
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40482 4 +    559221 ac-a-c
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        42064 4 -     51505 ac-a-c
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             355069 4 +   1103335 ac-a-c
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405926 4 -  44047080 ac-a-c
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6445 4 +     17875 ac-a-c
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001033.1                                  392 4 +      1169 GA-A-C
i Pan_paniscus.AJFE02001033.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1475681 4 - 189151597 GA-A-C
i Pan_troglodytes.CM009242.2                             I 208 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25834 4 -    230217 ac-a-c
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463160 4 -  18783137 ac-a-c
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973819 4 +   8748460 ac-a-c
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617451 4 +   2937107 ac-a-c
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244936 4 - 183742232 AA-A-C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11221 4 +     21308 aa-a-c
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293964 4 -  20919399 aa-a-c
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23869 4 -     27687 aa-a-c
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     540 4 +     10553 aa-a-c
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   500 4 -     10386 aa-a-c
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16415 4 +     78924 at-g-c
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28396 4 +     31479 ac-a-c
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20764 4 -     24908 ac-a-c
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3217 4 +      9367 aT-T-A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249579 4 +  18517816 aa-a-a
i Peromyscus_maniculatus.KI615324.1                      C 0 I 3
s Petromus_typicus.PetTyp_scaffold_17301                     33252 4 -     56120 ac-a-t
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5503 4 -     63832 ac-a-c
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            4186 4 +     55023 aa-a-c
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3656 4 -     89929 aa-a-c
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4246 4 +     40849 aa-a-c
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255921 4 +  14605196 AA-A-C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5326 4 +     22231 ac-a-c
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66100 4 +    207309 aa-a-c
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7188 4 -     25401 aa-a-c
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32936 4 +     58159 aa-a-c
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33212 4 +     63561 aa-a-c
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32972 4 +     51148 aa-a-c
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557942 4 -   4542175 aa-a-c
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32956 4 +     51125 aa-a-c
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2520 4 +     19503 AC-A-C
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9374 4 +     39866 aa-c-c
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4456 4 -      9282 aa-c-c
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43860 4 -     87950 aa-c-c
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44254 4 -     88961 aa-c-c
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8952 4 -     39403 aa-c-c
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43903 4 +     87928 aa-c-c
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8951 4 -     60166 aa-c-c
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15888 4 -     67232 aa-c-c
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43804 4 -     90634 aa-c-c
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45271 4 +     89403 aa-c-c
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   180797 4 - 189387572 GA-A-C
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195537 4 -   9816681 GA-A-C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29331 4 +     69807 aa-a-c
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46512 4 -     80239 aa-a-c
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5532 4 +      7663 gt-a-t
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983954 4 +   4620579 AC-A-C
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567449 4 -   2598838 AC-A-C
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5087 4 -      7103 ac-a-c
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5684 4 -     11706 ac-a-c
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9421 4 -     30655 ac-a-c
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35735 4 +     46564 ac-a-c
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96014 4 -     98465 ac-a-c
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9653 4 +     35169 ac-a-c
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39638 4 +     52041 aA-A-A
i Psammomys_obesus.NESX01036366.1                        C 0 I 3
s Pteronotus_parnellii.KE847780.1                            53526 4 -     66298 ac-a-c
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6010 4 -     18639 at-a-c
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842135 4 -  28871421 ac-a-c
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538650 4 -   4952924 ac-a-c
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100474 4 +  38429054 ac-a-g
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28698 4 +     91421 aa-a-c
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155250 4 -   7812017 aa-a-c
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9555 4 +     72585 aa-a-c
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   376 4 -     55207 ac-a-c
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916089 4 +   3329780 ac-a-c
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3217 4 +      7119 aa-a-c
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123832 4 + 195417433 AA-A-C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238059 4 -   7961872 aa-a-c
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76635 4 -    116970 ac-a-c
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                329 4 -      1130 aa-a-c
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5231 4 +      6077 aa-a-c
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5325 4 +      5971 aa-a-c
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5242 4 +      5932 aa-a-c
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3587 4 -      4390 aa-a-c
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393344 4 - 209938924 aa-a-c
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5190 4 +      5979 aa-a-c
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1760 4 -     22275 aa-a-c
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9614 4 +     16473 ac-a-c
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110353 4 + 121099817 AA-A-C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31920 4 -     47369 aa-a-c
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32306 4 -     79414 aa-a-c
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              28997 4 -     34454 aa-a-c
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16398 4 -     22428 aa-a-c
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31552 4 -     47109 aa-a-c
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239604 4 +   5703754 aa-a-c
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9194 4 +     21866 aa-a-c
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26882 4 +     27374 aa-a-c
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30530 4 +     58920 aa-a-c
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17028 4 -     45317 aa-a-c
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24686 4 -     42441 aa-a-c
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27364 4 -     29113 AA-A-C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30439 4 -     48123 aa-a-c
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51372 4 +     77746 aA-A-A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_126            1865482 4 -   1910179 ac-a-c
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672570 3 +  18376816 -A-T-C
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869727 3 +   3870691 at-g--
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8085 4 -     97271 ac-a-c
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126252 4 +    196729 ac-a-c
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645289 4 +  69701581 ac-a-c
i Sus_scrofa.CM000828.4                                  C 0 I 3
s Symphalangus_syndactylus.tarseq_199                       392506 4 +   1523678 aa-a-c
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15666 4 +     22964 ac-a-c
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4082 4 +      5583 ac-A-C
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192976 4 +    199430 ac-a-c
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106944 4 -    539355 ac-a-c
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                2018 1 +      9917 a-----
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8816 1 +     20590 a-----
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354745 4 - 186847797 AA-A-C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25405 4 -     33621 ac-a-c
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21038 4 -     31044 gc-a-c
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481518 4 -    610378 ac-a-c
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22495 4 +     26378 aa-a-c
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35239 4 -     78344 aa-a-c
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21820 4 +     25722 aa-a-c
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30195 4 -     62838 aa-a-c
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30239 4 +     46913 aa-a-c
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10978 4 -     28527 aa-a-c
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32130 4 -     64340 aa-a-c
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30168 4 -     63452 aa-a-c
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11615 4 +     22490 aa-a-c
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5038 4 -      6147 aa-a-c
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11951 4 -     13050 aa-a-c
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257113 4 -   6242583 aa-a-c
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3209 4 +     19340 aa-a-c
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175227 4 -    200418 at-a-c
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482894 4 -  10818551 at-a-t
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836436 4 -   4065304 ag-a-a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10471 4 -     70247 ag-a-a
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367103 4 -  33153633 ac-a-c
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4900 4 -     21056 AC-A-C
i Uropsilus_gracilis.UroGra_scaffold_46687               I 4 C 0
s Ursus_maritimus.KK499267.1                                183453 4 +   5085361 ac-a-c
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26607 4 -     30710 ac-a-c
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25514 4 -    147434 ac-a-c
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77633 4 +   5488506 ac-c-c
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106205 4 -    112863 ac-a-c
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175480 4 -    224448 at-g-c
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30445 4 -     86975 ac-a-c
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1284 4 -      1899 AA-G-T
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 I 2
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955 0 +    313613 C
e Rattus_norvegicus.chr16                                 37024511 126 -  90668790 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Condylura_cristata.JH655891.1                           35808250 0 +  53390261 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       8338  8 +     36723 TGT--A--A---GTT
s Acinonyx_jubatus.LLWD01001279.1                           814219  6 +   1699592 --t--g--a---gtt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27480  1 +     63021 -------------T-
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416680  8 +  29979442 tgt--a--a---gtt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 205
s Ailurus_fulgens.LNAC01001112.1                            217005  8 +    347723 tgt--a--a---att
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19853  2 -     61208 -------------tt
i Allactaga_bullata.AllBul_scaffold_20030                I 2 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49501  8 +     53615 tgt--a--a---gtt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1532  8 +     13857 tgt--a--a---gtt
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18083  8 -     21945 tgt--a--a---gtt
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19768  8 +     32033 tgt--a--a---gtt
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73546  7 -     84148 t-t--a--a---gtt
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45785  7 -     78289 t-t--a--a---gtt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45224  7 +     55831 t-t--a--a---gtt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43674  7 -     64179 t-t--a--a---gtt
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            781  7 -      3959 t-t--a--a---gtt
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42299  7 +     45454 t-t--a--a---gtt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47948  7 +     70886 t-t--a--a---gtt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10121  7 +     30854 t-t--a--a---gtt
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34255  7 +     42133 t-t--a--a---gtt
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587063  3 +   2318259 tat------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_1412                      178486  8 -    412891 tac--a--g---att
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52140  3 -     68529 tgt------------
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 2
s Aotus_azarae.k141_887050                                    2513  7 +     17741 t-t--a--a---gtt
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3138  7 -     15923 t-t--a--a---gtt
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673420  7 +   5030052 T-T--A--A---GTT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3414  7 -     16391 t-t--a--a---gtt
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2973  7 -     17186 t-t--a--a---gtt
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      24862  8 -     32367 TTT--A--A---GTT
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 7376 C 0
s Arctocebus_calabarensis.k141_1364444                       21545  8 -     45910 cgt--g--a---att
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6743  8 -     15198 tac--a--c---att
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276011  7 +  21539123 t-t--a--a---gct
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12178  7 +     48076 t-t--a--a---gtt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7313  7 -     28759 t-t--a--a---gtt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34868  7 +     44353 t-t--a--a---gct
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50238  7 -     71267 t-t--a--a---gtt
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24296  7 -     33135 t-t--a--a---gtt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7559  8 +     11645 tgt--a--a---att
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7567  8 -     19611 tgt--a--a---att
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9107  2 +     28062 -------------TT
i Cacajao_ayresi.k141_96119                              I 2 C 0
s Cacajao_calvus.k141_89051                                  44401  2 -     91139 -------------TT
i Cacajao_calvus.k141_89051                              I 2 C 0
s Cacajao_hosomi.k141_81245                                  21927  2 +     95584 -------------TT
i Cacajao_hosomi.k141_81245                              I 2 C 0
s Cacajao_melanocephalus.k141_619699                         21840  2 +    119600 -------------TT
i Cacajao_melanocephalus.k141_619699                     I 2 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964830  3 -  23207421 tat------------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 2
s Balaenoptera_bonaerensis.DF411050.1                         1330  3 -     25979 tat------------
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_7278                     88070  3 +    124022 tat------------
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 1 I 2
s Bison_bison.KN261452.1                                     23600  3 +    288883 tgt------------
i Bison_bison.KN261452.1                                 C 0 I 2
s Bos_indicus.CM003047.1                                  20357990  3 +  48749331 tgt------------
i Bos_indicus.CM003047.1                                 C 0 I 2
s Bos_mutus.JH880303.1                                      756554  3 +   1948126 tgt------------
i Bos_mutus.JH880303.1                                   C 0 I 2
s Bos_taurus.CM000203.6                                   27546696  3 -  45695690 tgt------------
i Bos_taurus.CM000203.6                                  C 0 I 2
s Bubalus_bubalis.KI419123.1                               1531704  3 -   4408762 tgt------------
i Bubalus_bubalis.KI419123.1                             C 0 I 2
s Callibella_humilis.k141_1233062                            11493  7 +     18648 t-t--t--a---gtt
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11009  7 -     13885 t-t--t--a---gtt
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3095  7 -      8861 t-t--t--a---gtt
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455487  7 + 189096842 T-T--T--A---GTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3010  7 +      8664 t-t--t--a---gtt
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632301  8 +  17673402 tgt--a--a---gtt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666588  8 +   7040546 tgt--a--a---gtt
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210246  8 +   1652518 tgt--a--a---gtt
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506575  8 +  60362399 tgt--a--a---gtt
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10211  8 -     23171 tgt--a--a---gtt
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223554  8 +   9314153 tgt--a--a---gtt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616689  8 +  59632846 tgt--a--a---gtt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108270  8 -  63665305 tgt--a--a---gtt
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410792  3 -  46296322 tat------------
i Capra_aegagrus.CM003241.1                              C 0 I 2
s Capra_hircus.CM004588.1                                 26593066  3 +  44709034 tat------------
i Capra_hircus.CM004588.1                                C 0 I 2
s Capromys_pilorides.CapPil_scaffold_762519                    806  8 -      1607 TTT--T--A---GTT
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272106  6 +    496798 --C--A--A---CTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1613  8 +      9923 tac--a--g---atc
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28969  8 -     39886 ctt--a--a---gtt
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80899  7 -    217609 --------tcttatt
i Catagonus_wagneri.CatWag_scaffold_2839                 I 3 C 0
s Cavia_aperea.AVPZ01000300.1                              4997703  8 +  23392119 ttt--t--t---gtt
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001145  8 +  23407841 ttt--t--c---gtt
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64224  8 -     66877 ttt--t--c---gtt
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6408  7 -     12580 t-t--t--a---gtt
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44466  7 +     53515 t-t--t--a---gtt
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374234  7 -  26074798 t-t--a--a---gtt
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9288  7 -     34880 t-t--a--a---gtt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68384  7 -     89041 t-t--a--a---gtt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4066  6 -      5494 --c--a--a---ctt
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493516  8 -  27778364 tgt--a--a---att
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20349  8 +     27315 tgt--a--a---att
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142581  8 -   4669795 TGT--A--A---GTT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46320  8 +     47900 tgt--a--a---gtt
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1753  8 -     14410 tgt--a--a---gtt
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46137  8 -    148725 tgt--a--a---gtt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28415  8 -     40656 tgt--a--a---gtt
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8379  6 +     20796 --t--a--a---gtt
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13488  8 -     17524 tgt--a--a---gtt
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29220  8 -     34525 tgt--a--a---gtt
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13000  8 -     25376 tgc--a--a---gtt
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365587  8 -  39242232 tgt--a--a---gtt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271314  8 +  21565898 tgt--a--a---gtt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33679  8 -     45857 tgt--a--a---gtt
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28583  8 -     32606 tgt--a--a---gtt
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4745  6 +      8499 t----a--a---gtt
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27141  8 +     70610 tgt--a--a---gtt
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24102  8 +     36323 tgt--a--a---gtt
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13946  8 -     19938 tat--a--a---gtt
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31955  8 -     33796 tgt--a--a---att
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6469  8 -     15404 tgt--a--a---att
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10213  7 -     32913 t-t--a--a---gtt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20626  7 -     40346 t-t--a--a---gtt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20881  7 +    216457 t-t--a--a---gtt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20670  7 +     39636 t-t--a--a---gtt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240036  8 -   2543920 ttt--t--a---gtt
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            333  7 +      1057 t-t--a--a---gtt
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43736  7 -    112038 t-t--a--a---gtt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9287  7 +     34062 t-t--a--a---gtt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345003  8 +  18827391 tgt--a--a---gtt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11542  8 -     44032 tgt--a--a---gtt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306394  8 - 135778131 TGT--A--A---Gtt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  209  8 +     10270 tat--a--a---gtt
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607685  8 -    839153 tat--a--a---gtt
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                 14  8 -      4087 TGT--A--A---ATT
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 I 39
s Colobus_angolensis.KN981557.1                             410802  8 -   2368649 TGT--A--A---GTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380683  8 - 200372422 tgt--a--a---gtt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4240  8 -     84244 tgt--a--a---gtt
i Colobus_polykomos.k141_906115                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4099  8 -      8242 tgt--a--a---gtt
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46157  1 -     83289 -------------T-
i Cricetomys_gambianus.CriGam_scaffold_14425             I 2 I 5
s Cricetulus_griseus.LT883664.1                          213117845  2 - 224834208 TT-------------
i Cricetulus_griseus.LT883664.1                          C 0 I 11
s Crocidura_indochinensis.CroInd_scaffold_77846              11066  8 +     12657 A----AATA---GCC
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5672  8 +     87169 tct--g--a---gtt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646712  8 -   1526836 ttt--a--a---gtt
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19877  8 +     50838 TTT--T--G---GTT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5609  8 +     36344 ttt--t--a---gtt
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29398  8 +     75252 ttt--t--a---gtt
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111313  8 -   2246927 cat--g--a---gtt
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293872  8 +  12879189 tgt--a--a---att
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633236  3 -  35494412 tat------------
i Delphinapterus_leucas.KZ290073.1                       C 0 I 2
s Desmodus_rotundus.KZ672289.1                            11866602  8 -  20541912 tac--a--a---att
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665788  8 -   1390856 tgt--a--a---att
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140588  8 -    198055 tgt--a--a---att
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100109  7 -    115145 ttt--t--a---gt-
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 3
s Dipodomys_ordii.KN672350.1                              18951880  8 -  37912305 ttt--a--a---cat
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6814  8 -     10735 TTT--A--A---CAT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856834 10 - 111700974 TGTGCA--A---ACT
i Echinops_telfairi.JH980293.1                           C 0 I 10
s Eidolon_helvum.AWHC01266696.1                               7586  7 +     19438 tat--a--a---g-t
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241420  3 -    607251 tat------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 2
s Elephantulus_edwardii.JH947257.1                         1227036  8 +  10337057 tat--a--a---gtt
i Elephantulus_edwardii.JH947257.1                       C 0 I 5
s Ellobius_lutescens.LOEQ01008920.1                          33693  1 +    110024 -------------t-
i Ellobius_lutescens.LOEQ01008920.1                      I 3 C 0
s Ellobius_talpinus.LOJH01026522.1                           15700  1 +     18970 -------------t-
i Ellobius_talpinus.LOJH01026522.1                       I 3 C 0
s Enhydra_lutris.KZ291758.1                               24917417  8 +  41312741 tcc--a--a---gtt
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580195  8 +  14770903 tgc--a--a---gtt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042733  8 -   4378816 tgt--a--a---att
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376671  8 +  39960074 tgt--a--a---att
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412653  8 -    498745 tgt--a--a---att
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667458  2 +   7059049 --------C-----A
i Erinaceus_europaeus.JH835339.1                         I 2 C 0
s Erythrocebus_patas.Contig38                               264539  8 +  21539334 tgt--a--a---gtt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72444  3 -    133382 tgt------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_57114               157  3 +     25849 tat------------
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 I 2
s Eulemur_albifrons.k141_51491                               16088  8 -     24895 tgt--a--a---att
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43798  8 -     70999 tgt--a--a---att
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87768  8 +    112731 tgt--a--a---att
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44331  8 +     68309 tgt--a--a---att
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54655  8 -     65740 tgt--a--a---att
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25288  8 -     75513 tgt--a--a---att
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49482  8 -     97555 tgt--a--a---att
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6206  8 +     30972 tgt--a--a---att
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43926  8 -     52037 tgt--a--a---att
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60329  8 -    111500 tgt--a--a---att
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248129  6 - 206538554 --t--g--a---gtt
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117915  6 - 205367284 --t--g--t---gtt
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 29015  6 -     30238 --T--G--A---GTT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923253  8 -   3816255 ttc--t--a---ttt
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126909  8 -    137831 tgt--a--a---att
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                            10454  8 +     22493 tgt--a--a---att
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                            22537  8 -     32986 tgt--a--a---att
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2467  8 -     28519 tgt--a--a---gtt
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93137  3 -     95226 tat------------
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 2
s Glis_glis.GliGli_scaffold_163929                            2615  8 -      6791 ttt--a--a---gtt
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3586045                              19224  8 -     19819 TGT--A--A---GTT
i Gorilla_beringei.k141_3586045                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                257653  8 - 186649187 tgt--a--a---gtt
i Gorilla_gorilla.LT578341.1                             C 0 I 29
s Graphiurus_murinus.GraMur_scaffold_10447                    3681  8 -     78134 ttt--a--a---gtt
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16013  8 -     40692 tgt--a--a---att
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37412  8 +     49394 tgt--a--a---att
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62283  8 -     66874 tgt--a--a---att
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11154  8 -     42923 tgt--a--a---att
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18156  8 -     53142 tgt--a--a---att
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32105  8 -    327341 tct--g--a---gtt
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10803  3 +     48891 tat------------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 2
s Heterocephalus_glaber.JH602082.1                         1933675  8 -  22651954 ttc--t--a---gtt
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1545  8 +      8654 tgt--a--a---gtt
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552947  2 -   1711038 -------------tt
i Hipposideros_armiger.JXIK01000431.1                    I 4 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2384  2 -      2730 -------------tt
i Hipposideros_galeritus.HipGal_scaffold_164997          I 4 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8946  3 -     36432 tat------------
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 2
s Hoolock_leuconedys.ctg274                                    144113  8 -    630532 tct--a--a---gtt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71478  1 +     83186 t--------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73095  8 +    143317 ttt--t--a---gtt
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7158  8 +     12352 tct--a--a---gtt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14342  8 +     55766 tct--a--a---gtt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053942  8 + 191637585 tct--a--a---gtt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802820  8 +  11177569 tct--a--a---gtt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8428  8 -    135385 ttt--t--g---gtt
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388152  8 +   7955117 ttt--g--a---gtt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3702  8 +     11955 tgt--a--a---att
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241340  2 +   9596543 -------------tt
i Jaculus_jaculus.JH725527.1                             I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11339  3 -     16823 tat------------
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 2
s Kogia_breviceps.KogBre_flattened_line_3970                 73179  3 -     97402 tat------------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 2
s Lagothrix_lagothricha.k141_246028                          44562  7 +    110728 t-t--a--a---gtt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64493  8 -     65777 ggc--a--a---gtt
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760810  8 +  30322482 tgt--a--a---att
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5469  7 -     13097 t-t--a--a---gtt
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5223  7 +      5940 t-t--a--a---gtt
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5046  7 -      5717 T-T--A--A---GTT
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      199  7 +      8855 T-T--T--A---GTT
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5001  7 -     13645 T-T--T--A---GTT
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10326  8 +     29618 tgt--a--a---att
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10322  8 +     31569 tgt--a--a---att
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10332  8 +     24756 tgt--a--a---att
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10332  8 +     16388 tgt--a--a---att
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814808  8 -   3914936 tat--a--a---ttt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342524  3 +    662738 tat------------
i Lipotes_vexillifer.KE559953.1                          C 0 I 2
s Lophocebus_aterrimus.ctg367                               335466  8 -   1826925 tgt--a--a---gtt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12621  8 +     19643 tgt--a--a---att
i Loris_lydekkerianus.k141_2031736                       C 0 C 0
s Loris_tardigradus.ctg83                                  5046291  8 -   6120653 tgt--a--a---att
i Loris_tardigradus.ctg83                                C 0 C 0
s Loxodonta_africana.GL010049.1                           39086209  8 +  43346337 cgt--a--a---gtt
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615844  8 +  59628241 tgt--a--a---gtt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46855  8 -     61512 tgt--a--a---gtt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374517  8 -  60120075 tgt--a--a---gtt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26785  8 +     30207 tgt--a--a---gtt
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1623  8 -      5035 tgt--a--a---gtt
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26738  8 +     30527 tgt--a--a---gtt
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37914  8 -     50087 tgt--a--a---gtt
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47658  8 +     51645 tgt--a--a---gtt
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416861  8 - 187317192 TGT--A--A---GTT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401091  8 +  25927173 TGT--A--A---GTT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50263  8 -     62418 tgt--a--a---gtt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2794  8 +     14901 tgt--a--a---gtt
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46735  8 +     59329 tgt--a--a---gtt
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272643  8 +    668171 tgt--a--a---gtt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1275  8 -      5049 tgt--a--a---gtt
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4441  8 +     17132 tgt--a--a---gtt
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224568  8 -    270270 tat-ta--a---g-t
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323931  8 +  24302211 tgt--a--a---gtt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358762  8 -    752769 tgt--a--a---gtt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674850  8 -    737560 tac--a--a---gtt
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222150  8 +    317179 tac--a--a---gtt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502366  8 +  40650429 ttt--g--a---gtt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151721  8 +    207569 tgt--a--a---att
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27536  8 -     74585 tac--a--a---gtt
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52120  1 -    140813 -------------t-
i Meriones_unguiculatus.MerUng_scaffold_7390             I 3 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88808  3 +     93471 tat------------
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 2
s Mico_argentatus.k141_582562                                11591  7 +     17804 t-t--t--a---gtt
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12091  7 -     12984 t-t--t--a---gtt
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20410  7 -     26561 t-t--t--a---gtt
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986164  8 +  93316391 TGT--A--A---ATT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48007 10 +    145209 tgtgaa--a---act
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 19
s Micronycteris_hirsuta.MicHir_scaffold_2233                186392  8 +    200668 tac--a--a---att
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965149  1 +  27267610 -------------T-
i Microtus_ochrogaster.CM001695.1                        I 3 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364544  8 -   8254450 tgc--a--a---gtt
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 8
s Miniopterus_schreibersii.MinSch_scaffold_23309             43464  8 -     48117 tgc--a--a---gtt
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 8
s Miopithecus_ogouensis.k141_1534655                         24031  8 -     27822 tgt--a--a---gtt
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9819  8 +     27589 TAT--A--A---TTT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53939  8 -     62432 tgt--a--a---att
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360913  3 +    437263 TAT------------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180637  8 +    366855 cac--a--a---att
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27248  3 -     82753 tat------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 2
s Mungos_mungo.MunMun_flattened_line_18455                   19839  8 -     63510 tct--g--a---gtt
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42497  8 +     47283 tgc--a--a---gtt
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596320  1 + 120012414 -------------T-
i Mus_caroli.LT608237.1                                  I 2 C 0
s Mus_musculus.chr8                                       41689516  1 + 129401213 -------------T-
i Mus_musculus.chr8                                      I 2 C 0
s Mus_spretus.CM004101.1                                  39498800  1 + 130317789 -------------T-
i Mus_spretus.CM004101.1                                 I 1 C 0
s Mus_pahari.LT608297.1                                   58217857  2 +  89631738 TT-------------
i Mus_pahari.LT608297.1                                  C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_12866             85519  8 -     86153 ttt--a--a---agt
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356434  8 +  14710649 TAC--a--a---gtt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64394  8 +     67721 ttt--t--a---gct
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794759  8 +  10118263 tgc--a--a---gtt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388934  8 +   6019432 tgc--a--a---gtt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384962  8 +   4330536 tgc--a--a---gtt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3747  8 +     18357 tgc--a--a---gtt
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121094  8 +    130748 aat--a--a---gtt
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             948014  2 +   3037898 -------------TT
i Nannospalax_galili.KL204047.1                          I 3 C 0
s Nasalis_larvatus.k141_1350636                              30753  8 +     34575 tgt--a--a---gtt
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233579  3 -   7148211 tat------------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_7894                   129248  8 -    149072 tgc--a--a---att
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55044  8 -    132029 tct--a--a---gtt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11139  8 -     16345 tct--a--a---gtt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17024  8 +     22201 tct--a--a---gtt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415245  8 -  22158432 tct--a--a---gtt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27422  8 -     54323 tct--a--a---gtt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199440  8 +   9404916 ttt--a--a---gtt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                             93639514  8 + 196305487 tgt--a--a---att
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_1296080                             2117  8 -      9413 tgt--a--a---att
i Nycticebus_coucang.k141_1296080                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566897  8 - 199412804 tgt--a--a---att
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Ochotona_princeps.JH802162.1                             2558204  8 -   3988456 TAA--A--A---GTT
i Ochotona_princeps.JH802162.1                           C 0 I 11
s Octodon_degus.JH651603.1                                11056484  8 -  11899542 ttt--g--a---gtt
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453237  8 +   2017862 tat--a--a---ttt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95820  1 -    140218 -------------t-
i Ondatra_zibethicus.OndZib_scaffold_7387                I 3 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6366  1 -     41509 -------------T-
i Onychomys_torridus.OnyTor_scaffold_28377               I 3 C 0
s Odocoileus_virginianus.KZ100018.1                         438335  3 -    630418 tat------------
i Odocoileus_virginianus.KZ100018.1                      C 0 I 2
s Okapia_johnstoni.LVCL01S0005463.1                          16219  3 +    150152 tat------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 2
s Orcinus_orca.KB316932.1                                  8103982  3 +  10937097 tat------------
i Orcinus_orca.KB316932.1                                C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_201229               1279  8 +     11607 tgt--g--a---gtt
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40486  8 +    559221 tat--a--a---gtt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        42068  8 -     51505 tgt--a--a---att
i Otolemur_crassicaudatus.k141_649260                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             355073  8 +   1103335 tgt--a--a---att
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   26405930  3 -  44047080 tat------------
i Ovis_aries.CM001607.2                                  C 0 I 2
s Ovis_canadensis.OviCan_scaffold_67953                       6449  3 +     17875 tat------------
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 2
s Pan_paniscus.AJFE02001033.1                                  396  8 +      1169 TGT--A--A---GTT
i Pan_paniscus.AJFE02001033.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1475685  8 - 189151597 TGT--A--A---GTT
i Pan_troglodytes.CM009242.2                             C 0 I 34
s Panthera_onca.PanOnc_flattened_line_3271                   25838  6 -    230217 --t--g--a---gtt
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463164  6 -  18783137 --t--g--a---gtt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973823  6 +   8748460 --t--g--a---gtt
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617455  3 +   2937107 tat------------
i Pantholops_hodgsonii.KE114653.1                        C 0 I 2
s Papio_anubis.CM001495.2                                   244940  8 - 183742232 TGT--A--A---GTT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11225  8 +     21308 tgt--a--a---gtt
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293968  8 -  20919399 tgt--a--a---gtt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23873  8 -     27687 tgt--a--a---gtt
i Papio_kindae.k141_2214839                              C 0 I 2
s Papio_papio.k141_3538738                                     544  8 +     10553 tgt--a--a---gtt
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   504  8 -     10386 tgt--a--a---gtt
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16419  8 +     78924 tct--g--a---gtt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28400  8 +     31479 cgt--g--a---att
i Perodicticus_ibeanus.k141_1921260                      C 0 C 0
s Perodicticus_potto.k141_1854441                            20768  8 -     24908 cgt--g--a---att
i Perodicticus_potto.k141_1854441                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3221  8 +      9367 TTT--A--A---ATT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249586  1 +  18517816 -------------t-
i Peromyscus_maniculatus.KI615324.1                      I 3 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33256  8 -     56120 tta--t--g---gtt
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5507  3 -     63832 tat------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 2
s Piliocolobus_badius.k141_2704958                            4190  8 +     55023 tgt--a--a---gtt
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3660  8 -     89929 tgt--a--a---gtt
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4250  8 +     40849 tgt--a--a---gtt
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255925  8 +  14605196 TGT--A--A---GTT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5330  8 +     22231 tgc--a--a---gtt
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66104  7 +    207309 t-t--a--a---gtt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7192  7 -     25401 t-t--a--a---gtt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32940  7 +     58159 t-t--a--a---gtt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33216  7 +     63561 t-t--a--a---gtt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32976  7 +     51148 t-t--a--a---gtt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557946  7 -   4542175 t-t--a--a---gtt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32960  7 +     51125 t-t--a--a---gtt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2524  3 +     19503 TAT------------
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 2
s Plecturocebus_bernhardi.k141_2549090                        9378  7 +     39866 t-t--a--a---gtt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4460  7 -      9282 t-t--a--a---gtt
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43864  7 -     87950 t-t--a--a---gtt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44258  7 -     88961 t-t--a--a---gtt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8956  7 -     39403 t-t--a--a---gtt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43907  7 +     87928 t-t--a--a---gtt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8955  7 -     60166 t-t--a--a---gtt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15892  7 -     67232 t-t--a--a---gtt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43808  7 -     90634 t-t--a--a---gtt
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45275  7 +     89403 t-t--a--a---gtt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   180801  8 - 189387572 TGT--A--A---ATT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195541  8 -   9816681 TGT--A--A---ATT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29335  8 +     69807 tgt--a--a---gtt
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46516  8 -     80239 tgt--a--a---gtt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5536  8 +      7663 tgt--a--a---gtt
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983958  8 +   4620579 tgt--a--a---att
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567453  8 -   2598838 Tgt--a--a---att
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5091  8 -      7103 tgt--a--a---att
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5688  8 -     11706 tgt--a--a---att
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9425  8 -     30655 tgt--a--a---att
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35739  8 +     46564 tgt--a--a---att
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96018  8 -     98465 tgt--a--a---att
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9657  8 +     35169 tgt--a--a---att
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39645  1 +     52041 -------------T-
i Psammomys_obesus.NESX01036366.1                        I 3 C 0
s Pteronotus_parnellii.KE847780.1                            53530  8 -     66298 tac--a--a---att
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6014  8 -     18639 tac--a--a---gtt
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842139  7 -  28871421 tat--a--a---g-t
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538654  7 -   4952924 tat--a--a---g-t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100478  6 +  38429054 --t--g--a---gtt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28702  8 +     91421 tgg--a--a---gtt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155254  8 -   7812017 tgt--a--a---gtt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9559  8 +     72585 tgt--a--a---gtt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   380  3 -     55207 tat------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 2
s Rhinolophus_sinicus.LVEH01000134.1                       2916093  8 +   3329780 tat--a--a---att
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3221  8 +      7119 tgt--a--a---gtt
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123836  8 + 195417433 TGT--A--A---GTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238063  8 -   7961872 tgt--a--a---gtt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76639  7 -    116970 tgt--a--a---g-t
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                333  7 -      1130 t-t--a--a---gtt
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5235  7 +      6077 t-t--a--a---gtt
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5329  7 +      5971 t-t--a--a---gtt
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5246  7 +      5932 t-t--a--a---gtt
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3591  7 -      4390 t-t--a--a---gtt
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393348  7 - 209938924 t-t--a--a---gtt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5194  7 +      5979 t-t--a--a---gtt
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1764  7 -     22275 t-t--a--a---gtt
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9618  3 +     16473 tat------------
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 2
s Saimiri_boliviensis.NW_024100920.1                       1110357  7 + 121099817 T-T--A--A---GTT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31924  7 -     47369 t-t--a--a---gtt
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32310  7 -     79414 t-t--a--a---gtt
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29001  7 -     34454 t-t--a--a---gtt
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16402  7 -     22428 t-t--a--a---gtt
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31556  7 -     47109 t-t--a--a---gtt
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239608  7 +   5703754 t-t--a--a---gtt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9198  7 +     21866 t-t--a--a---gtt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_158471                         26886  8 +     27374 tgt--a--a---gtt
i Semnopithecus_entellus.k141_158471                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30534  8 +     58920 tgt--a--a---gtt
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17032  8 -     45317 tgt--a--a---gtt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24690  8 -     42441 tgt--a--a---gtt
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27368  8 -     29113 TGT--A--A---GTT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30443  8 -     48123 tgt--a--a---gtt
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51379  1 +     77746 -------------T-
i Sigmodon_hispidus.SigHis_scaffold_20193                I 3 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865486  6 -   1910179 t----a--a---gtt
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672573  6 +  18376816 A----A--A---GTT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869730  8 +   3870691 ttt--g--a---gtt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8089  8 -     97271 tat--a--a---act
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126256  8 +    196729 tct--g--a---gtt
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645296  7 +  69701581 --------tcttatt
i Sus_scrofa.CM000828.4                                  I 3 C 0
s Symphalangus_syndactylus.tarseq_199                       392510  8 +   1523678 tct--a--a---gtt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15670  8 +     22964 tac--a--a---gtt
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4086  8 +      5583 AAT--A--A---GTT
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192980  8 +    199430 tgt--a--a---att
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106948  8 -    539355 tgt--a--a---att
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                2019  6 +      9917 --c--a--a---ctt
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8817  6 +     20590 --c--a--a---ctt
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354749  8 - 186847797 TGT--A--A---GTT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25409  8 -     33621 tta--t--g---gtt
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21042  8 -     31044 tat--a--a---gtt
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481522  8 -    610378 tac--a--g---att
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22499  8 +     26378 tgt--a--a---gtt
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35243  8 -     78344 tgt--a--a---gtt
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21824  8 +     25722 tgt--a--a---gtt
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30199  8 -     62838 tgt--a--a---gtt
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30243  8 +     46913 tgt--a--a---gtt
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10982  8 -     28527 tgt--a--a---gtt
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32134  8 -     64340 tgt--a--a---gtt
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30172  8 -     63452 tgt--a--a---gtt
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11619  8 +     22490 tgt--a--a---gtt
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5042  8 -      6147 tgt--a--a---gtt
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11955  8 -     13050 tgt--a--a---gtt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257117  8 -   6242583 tgt--a--a---gtt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3213  8 +     19340 tgt--a--a---gtt
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175231  3 -    200418 tgt------------
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 2
s Trichechus_manatus.JH594705.1                            6482898  8 -  10818551 tgt--a--a---gtt
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836440  8 -   4065304 tat--g--a---gta
i Tupaia_chinensis.KB320699.1                            C 0 I 24
s Tupaia_tana.TupTan_flattened_line_394                      10475  8 -     70247 tat--g--a---gtg
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 11
s Tursiops_truncatus.MRVK01000835.1                       17367107  3 -  33153633 tat------------
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_46687                    4904  8 -     21056 T--ACA--A---GTT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183457  8 +   5085361 tgt--a--a---gtt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26611  8 -     30710 tgt--a--a---att
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25518  8 -    147434 tgt--a--a---att
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77637  8 +   5488506 tat--a--a---gtt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106209  8 -    112863 tat--a--a---gtt
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175484  8 -    224448 ttt--g--a---gtt
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30449  8 -     86975 tat--a--a---ttt
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1290  2 -      1899 -------------TT
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 2 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    116955  0 +    313613 C
e Rattus_norvegicus.chr16                                 37024511 126 -  90668790 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Condylura_cristata.JH655891.1                           35808250  0 +  53390261 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       8346 44 +     36723 CT----------------ATTCT-------------------TCTT---CCA-GTTTTACAAAA-C--A-----GAAAC--AGACAAACAAA-------C
s Acinonyx_jubatus.LLWD01001279.1                           814225 40 +   1699592 gt----------------at---t----ttt-----gt----t------tcc-attctgcagaa-t--aga-----tac--tgaggcA-----------A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27481 39 +     63021 -T----------------GT----------------TTGTTTT------CAT-Gttggtcaaaa-t--a-----gtagt--tgaggca-----------c
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 128
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416893 40 +  29979442 ct----------------at---t----ttt-----gt----t------ctc-attctgcagaa-c--aga-----gat--tgaggta-----------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 205 C 0
s Ailurus_fulgens.LNAC01001112.1                            217013 40 +    347723 ct----------------at---t----ttt-----gt----c------ccc-attctacagaa-c--aga-----gat--taagaca-----------a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19855 39 -     61208 at----------------at------cctt-a-----t----t------tcc-attttatcaaa-c--a-----gaaat--tgagcca------------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   49509 40 +     53615 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1540 36 +     13857 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaaC--A----AA-----------C
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18091 40 -     21945 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19776 40 +     32033 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73553 32 -     84148 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aca----------------
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45792 32 -     78289 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45231 32 +     55831 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aca----------------
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43681 32 -     64179 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gaaac--aga----------------
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            788 32 -      3959 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42306 32 +     45454 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aca----------------
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47955 32 +     70886 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10128 32 +     30854 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aca----------------
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34262 32 +     42133 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aca----------------
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587068 40 +   2318259 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--aga-----aac--agagtca-----------a
i Ammotragus_lervia.NIVO01071767.1                       I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178494 36 -    412891 ct----------------at---t---ctt-a-----t----t------ccc-attgtacagaa-c--t-------gat--tgagg-------------c
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52145 40 -     68529 ga----------------at---t---ctt-a---------ct------ccc-actatgcaaaa-c--aga-----aac--tgagtca-----------a
i Antilocapra_americana.AntAmePen_scaffold_21030         I 2 C 0
s Aotus_azarae.k141_887050                                    2520 31 +     17741 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac---GA----------------
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3145 31 -     15923 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac---GA----------------
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673427 31 +   5030052 CT----------------GT-------------------TCTT------CCA-ATTTTACAAAA-C--T-----GAGAT---GA----------------
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3421 31 -     16391 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac---GA----------------
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               2980 31 -     17186 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac---GA----------------
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      24870 26 -     32367 CT----------------AT----------------TTTTATT------TTC-ATTTTACAAAA-T----------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 12
s Arctocebus_calabarensis.k141_1364444                       21553  3 -     45910 at----------------a---------------------------------------------------------------------------------
i Arctocebus_calabarensis.k141_1364444                   C 0 N 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6751 36 -     15198 ct----------------ac---t---ctt-a-----t----g------ccc-attgtacagaa-c--t-------gat--tgagg-------------c
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276018 32 +  21539123 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12185 32 +     48076 ct----------------gt---t----tt------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7320 32 -     28759 ct----------------gt---t----tt------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34875 32 +     44353 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50245 32 -     71267 ct----------------gt---t----tt------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24303 32 -     33135 ct----------------gt---t----tt------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7567 42 +     11645 at----------------at---t---ct-------------t---atttca-attttacaaaa-g--a-----gaaattgaggccca-----------g
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7575 42 -     19611 at----------------at---t---ct-------------t---atttca-attttacaaaa-g--a-----gaaattgaggccca-----------g
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964835 40 -  23207421 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--aga-----cac--gaagtca-----------a
i Balaenoptera_acutorostrata.KI537508.1                  I 2 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1335 40 -     25979 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--aga-----cac--gaagtca-----------a
i Balaenoptera_bonaerensis.DF411050.1                    I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88075 40 +    124022 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--aga-----aac--agagtca-----------a
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 2 C 0
s Bison_bison.KN261452.1                                     23605 39 +    288883 ga----------------at---t---gtt-a-----t----t------ccc-actctacaa-a-g--aga-----aac--tgagtca-----------a
i Bison_bison.KN261452.1                                 I 2 C 0
s Bos_indicus.CM003047.1                                  20357995 39 +  48749331 ga----------------at---t---gtt-a-----t----t------ccc-actctacaa-a-g--aga-----aac--tgagtca-----------a
i Bos_indicus.CM003047.1                                 I 2 C 0
s Bos_mutus.JH880303.1                                      756559 39 +   1948126 ga----------------at---t---gtt-a---------gt------ccc-actctacaa-a-g--aga-----aac--tgagtca-----------a
i Bos_mutus.JH880303.1                                   I 2 C 0
s Bos_taurus.CM000203.6                                   27546701 39 -  45695690 ga----------------at---t---gtt-a-----t----t------ccc-actctacaa-a-g--aga-----aac--tgagtca-----------a
i Bos_taurus.CM000203.6                                  I 2 C 0
s Bubalus_bubalis.KI419123.1                               1531709 39 -   4408762 ga----------------at---t---gtt-a-----t----t------ccc-acactacaa-a-g--aga-----aac--tgagtca-----------a
i Bubalus_bubalis.KI419123.1                             I 2 C 0
s Cacajao_ayresi.k141_96119                                   9109 32 +     28062 CT----------------GT-------------------TCTT------CCA-GTTTTACCAAA-C--T-----GAGAC--AGA----------------
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44403 32 -     91139 CT----------------GT-------------------TCTT------CCA-GTTTTACCAAA-C--T-----GAGAC--AGA----------------
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21929 32 +     95584 CT----------------GT-------------------TCTT------CCA-GTTTTACCAAA-C--T-----GAGAC--AGA----------------
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21842 32 +    119600 CT----------------GT-------------------TCTT------CCA-GTTTTACCAAA-C--T-----GAGAC--AGA----------------
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11500 32 +     18648 ct----------------gt---t---ct-------------t------cca-attttacaaaA-C--C-----GAGAC--AGA----------------
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11016 32 -     13885 ct----------------gt---t---ct-------------t------cca-attttacaaag-c--t-----gagac--aga----------------
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3102 32 -      8861 ct----------------gt---t---ct-------------t------cca-attttacaaaA-C--C-----AAGAC--AGA----------------
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455494 32 + 189096842 CT----------------GT-------------------TCTT------CCA-ATTTTACAAAA-C--C-----AAGAC--AGC----------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3017 32 +      8664 ct----------------gt---t---ct-------------t------cca-attttacaaaA-C--C-----GAGAC--AGA----------------
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632309 40 +  17673402 ct----------------gt---t---cttt------t----t------ccc-actctacaaaa-c--aga-----aac--tgaggca-----------a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666596 40 +   7040546 ct----------------gt---t---cttt------t----t------ccc-actctacaaaa-c--aga-----aac--tgaggca-----------a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210254 40 +   1652518 ct----------------gt---t---cttt------t----t------ccc-actctacaaaa-c--aga-----aac--tgaggca-----------a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506583 40 +  60362399 ct----------------at---t----ttt-----gt----a------ccc-attctacagga-c--a--gc---aat--tgaggta-----------a
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10219 40 -     23171 ct----------------at---t----ttt-----gt----a------ccc-attctacagga-c--a--gc---aat--tgaggTA-----------A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223562 40 +   9314153 ct----------------at---t----ttt-----gt----a------ccc-attctacagga-c--a--gc---aat--tgaggta-----------a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616697 40 +  59632846 ct----------------at---t----ttt-----gt----a------ccc-attctacagga-c--a--gc---aat--tgaggta-----------a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108278 40 -  63665305 ct----------------at---t----ttt-----gt----a------ccc-attctacagga-c--a--gc---aat--tgaggta-----------a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410797 40 -  46296322 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--aga-----aac--agagtca-----------a
i Capra_aegagrus.CM003241.1                              I 2 C 0
s Capra_hircus.CM004588.1                                 26593071 40 +  44709034 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--aga-----aac--agagtca-----------a
i Capra_hircus.CM004588.1                                I 2 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    814 38 -      1607 CT----------------AT------------------TTTGT------CAT-ATTTTGCAAAT-T--A-----GAAAG--TGAGGCA-----------G
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272112 41 +    496798 CT----------------at---t---ct-------------t---attccc-attttacaaaagc--A-----GAAAT--TGAGGCA-----------G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1621 36 +      9923 gc----------------at---t---ctt-a-----t----g------ccc-attatacagaa-c--t-------gac--tgagg-------------t
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    28977 45 -     39886 ct----------------at---t---ctt-a-----t----t------tcc-attttacaaaa-c--aaaactgaaat--tgaagca-----------g
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80906 39 -    217609 ct----------------at---t---ct-ca-----t----t------ccc-tct-gacagca-t--aga-----aac--tgagtca-----------a
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997711 38 +  23392119 ct----------------at------cgt--a----------t------tct-gttttataaac-t--a-----gacat--tgagaca-----------c
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001153 38 +  23407841 ct----------------at------cgt--a----------t------tct-gttttataaac-t--a-----gacat--tgagaca-----------c
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64232 38 -     66877 ct----------------at------cgt--a----------t------tct-gttttataaac-t--a-----gacat--tgagaca-----------c
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6415 32 -     12580 ct----------------gt---t---ct-------------t------cca-attttacaaaA-C--C-----GAGAC--AGA----------------
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44473 32 +     53515 ct----------------gt---t---ct-------------t------cca-attttacaaaA-C--C-----GAGAC--AGA----------------
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374241 32 -  26074798 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9295 32 -     34880 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68391 32 -     89041 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4072 41 -      5494 ct----------------at---t---ct-------------t---attccc-attttacaaaagc--a-----gaaat--tgagaca-----------g
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493524 40 -  27778364 ct----------------at---t---ctt-a-----t----t------ctt-agtctacaaaa-c--aga-----aat--tgaggca-----------g
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20357 40 +     27315 ct----------------at---t---ctt-a-----t----t------ctt-agtctacaaaa-c--aga-----aat--tgaggca-----------g
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142589 40 -   4669795 CT----------------AT-------------------TCTTCTT---CCa-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46328 40 +     47900 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1761 40 -     14410 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46145 40 -    148725 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28423 40 -     40656 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8385 37 +     20796 ct----------------at---t---ct-------------t------cca-attttacaaaa-c--a-----gaaaC--AGACAAA-----------C
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13496 40 -     17524 cc----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29228 40 -     34525 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13008 40 -     25376 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365595 40 -  39242232 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271322 40 +  21565898 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33687 40 -     45857 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28591 37 -     32606 ct----------------at---t---ct-------------t------cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4751 40 +      8499 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27149 40 +     70610 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24110 40 +     36323 cc----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13954 40 -     19938 ct----------------at---t---ctt-a-----t----t------ccc-attttgcaaaa-c--a-----gaaat--tgaggca-----------g
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             31963 58 -     33796 atgaggatcttaatttcaat-------ctt------------t---atttca-attttacaaat-g--a-----gaaattgaggcctg-----------g
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6477 42 -     15404 at----------------at------cct-------------t---atttca-attttacaaat-g--a-----gaaattgaggcctg-----------g
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10220 32 -     32913 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20633 32 -     40346 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20888 32 +    216457 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20677 32 +     39636 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240044 38 -   2543920 ct----------------at---t----tt-a----------t------gcc-attttacaaac-t--a-----gagat--tgaggca-----------c
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            340 32 +      1057 ct----------------gc---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43743 32 -    112038 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9294 32 +     34062 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345011 40 +  18827391 ct----------------at---t----tt------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11550 40 -     44032 ct----------------at---t----tt------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306402 40 - 135778131 ct----------------at---t----tt------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  217 40 +     10270 ct----------------at---ta--ct--a-----t----t------ccc-attttacaaaa-c--a-----gaaat--ttaggtg-----------g
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607693 40 -    839153 ct----------------at---ta--ct--a-----t----t------ccc-attttacaaaa-c--a-----gaaat--ttaggtg-----------g
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_4313612               125 39 +       302 tt----------------at------cctt-a-----t----t------act-atttcacaaaa-c--a-----gcaat--tgaaa-a-----------a
i Chrysochloris_asiatica.ChrAsi_scaffold_4313612         I 23 n 39
s Colobus_angolensis.KN981557.1                             410810 37 -   2368649 CT----------------AT----------------------TCTT---CCa-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380691 40 - 200372422 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4248 40 -     84244 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808250 39 +  53390261 ------------------tt---t----ttt------ttat-t------cca-actaTACA-AT-CAGA-------AAT--TGTATAG-----------A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4107 40 -      8242 tt----------------at---t---ctt-a-----t----t------ctc-gttctgcaaaa-c--aga-----aat--tgaggca-----------g
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46163 30 -     83289 ------------------------------------------T------CAT-ATTTGACAAAA-C--A-----GTAGT--TGAGGCA-----------C
i Cricetomys_gambianus.CriGam_scaffold_14425             I 5 I 24
s Cricetulus_griseus.LT883664.1                          213117858 37 - 224834208 ------------------------------------------T------CAT-ATTTGACACAA-T--A-----GGAGT--TGAagca----ctcaacac
i Cricetulus_griseus.LT883664.1                          I 11 I 97
s Crocidura_indochinensis.CroInd_scaffold_77846              11074  4 +     12657 CT----------------AA--------------------------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 589
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5680 40 +     87169 ct----------------at---t----ttt-----gt----t------tcc-attctacagaa-c--aga-----aat--tgaggca-----------a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646720 38 -   1526836 ct----------------at---t----tt-a-----t----t------ccc-attttgcaaaa-t--a-----ga-at--tgaggca-----------g
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19885 35 +     50838 CT----------------AT------------------TTTGT------CAT-AGTTTACAAAC-T--A-----GGAAG--TGAGG--------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5617 38 +     36344 ct----------------at---t----tt-a----------t------tct-attttacaaac-t--a-----gaaat--tgaggcg-----------c
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29406 38 +     75252 ct----------------at---t----tt-a----------t------tct-attttacaaac-t--a-----gaaat--tgaggca-----------c
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111321 39 -   2246927 ct----------------at---t---ctt-a-----t----t------cct-atttcatgaaa-c--a-----gaaat--tgaggcA------------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293880 42 +  12879189 at----------------at---t---ct-------------t---atccca-attttacaaaa-c--a-----gaaattgaggccca-----------g
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633241 40 -  35494412 ga----------------at---t---ctt-a---------ct------ccc-actgtacaaaa-c--aga-----cac--gaaatca-----------a
i Delphinapterus_leucas.KZ290073.1                       I 2 C 0
s Desmodus_rotundus.KZ672289.1                            11866610 36 -  20541912 ct----------------at---t---ctt-a-----t----g------ccc-attgtacagaa-c--t-------gat--tgaag-------------c
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665796 40 -   1390856 ct----------------at---t---ctt-a-----t----t------cct-agtctacaaaa-c--aga-----aat--tgaggca-----------g
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140596 40 -    198055 ct----------------at---t---ctt-a-----t----t------cct-agtctacaaaa-c--aga-----aat--tgaggca-----------g
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100119 30 -    115145 ------------------------------------------t------ccc-attttacaaac-t--a-----gagac--tgaggcg-----------c
i Dinomys_branickii.DinBra_scaffold_10381                I 3 C 0
s Dipodomys_ordii.KN672350.1                              18951888 40 -  37912305 ct----------------ac---t---gtt----------ggt------cta-gttttaccaaa-c--a-----gaaat--tgaagca-----------G
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6822 40 -     10735 CT----------------AC----------------TCTTGGT------CTC-ATTTTACCAAA-C--A-----GAAAT--TGAAGTA-----------G
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856854 20 - 111700974 ----------------------------------------------------------GCAAAA-C--A-----GAAAT--TGAGG-C-----------C
i Echinops_telfairi.JH980293.1                           I 10 C 0
s Eidolon_helvum.AWHC01266696.1                               7593 40 +     19438 ct----------------ac---t----ttt-----gt----t------ccc-attctgcaaaa-t--gga-----aat--tgaggtg-----------g
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241425 40 -    607251 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--aga-----aac--tgagtca-----------a
i Elaphurus_davidianus.JRFZ01104969.1                    I 2 C 0
s Elephantulus_edwardii.JH947257.1                         1227049 28 +  10337057 --------------------------------------------------ct-attttacaaaa-c--a-----gaaat--agaggcg-----------g
i Elephantulus_edwardii.JH947257.1                       I 5 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33694 39 +    110024 -t----------------gt---t----tgta-----t----t------cat-ATTTGACAAGA-T--A-----ATAGT--TAAGgag-----------c
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 125
s Ellobius_talpinus.LOJH01026522.1                           15701 39 +     18970 -t----------------gt---t----tgta-----t----t------cat-ATTTGACAAGA-T--A-----ATAGT--tgaggca-----------c
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 54
s Enhydra_lutris.KZ291758.1                               24917425 40 +  41312741 ct----------------at---t----ttt-----gt----t------ccc-attctacagaa-c--aga-----gat--taagaga-----------a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580203 36 +  14770903 ct----------------at---t---ctt-a-----t----c------ccc-attctataaaa-c--a-------aat--tgagg-------------c
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042741 40 -   4378816 ct----------------at---t---ctt-a-----t----t------cct-attctataaaa-g--aga-----aat--tgaggga-----------g
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376679 41 +  39960074 ct----------------at---t---ctt-a-----t----t------cctcattctataaaa-g--aga-----aat--tgaggga-----------g
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412661 41 -    498745 ct----------------at---t---ctt-a-----t----t------cctcattctataaaa-g--aga-----aat--tgaggga-----------g
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667460 26 +   7059049 CT----------------AT----------------GCTTATT------CCT-ATTATTCAAAA-C----------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264547 33 +  21539334 ct----------------at---t---ct-------------t------cca-attttacaaaa-c--a-----gaa------aCAAA-----------C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72449 40 -    133382 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--a---gg--cac--gaagtca-----------a
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               162 40 +     25849 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--aga-----cac--gaagtca-----------a
i Eubalaena_japonica.EubJap_flattened_line_57114         I 2 C 0
s Eulemur_albifrons.k141_51491                               16096 42 -     24895 at----------------at---t---ct-------------t---attcca-attttacaaat-g--a-----gaaattgaggcccg-----------g
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43806 42 -     70999 at----------------at---t---ct-------------t---attcca-attttacaaat-g--a-----gaaattgaggcccg-----------g
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87776 42 +    112731 at----------------at---t---ct-------------t---attcca-attttacaaat-g--a-----gaaattgaggcccg-----------g
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44339 42 +     68309 at----------------at---t---ct-------------t---attcca-attttacaaat-g--a-----gaaattgaggcccg-----------g
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54663 42 -     65740 at----------------at---t---ct-------------t---attcca-attttacaaat-g--a-----gaaattgaggcccg-----------g
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25296 42 -     75513 at----------------at---t---ct-------------t---attcca-attttacaaat-g--a-----gaaattgaggcccg-----------g
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49490 42 -     97555 at----------------at---t---ct-------------t---attcca-attttacaaat-g--a-----gaaattgaggcctg-----------g
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6214 42 +     30972 at----------------at---t---ct-------------t---attcca-attttacaaat-g--a-----gaaattgaggccca-----------g
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43934 42 -     52037 at----------------at---t---ct-------------t---attcca-attttacaaat-g--a-----gaaattgaggcccg-----------g
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60337 42 -    111500 at----------------at---t---ct-------------t---attcca-attttacaaat-g--a-----gaaattgaggcccg-----------g
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248135 40 - 206538554 gt----------------at---t----ttt-----gt----t------tcc-attctgcagaa-c--aga-----tat--tgaggcA-----------A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117921 40 - 205367284 gt----------------at---t----ttt-----gt----t------tcc-attctgcAGAA-C--A---GA--TAT--TGAGGCA-----------A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 29021 40 -     30238 GT----------------AT----------------TTTTGTT------TCC-ATTCTGCAGAA-C--A---GA--TAT--TGAGGCA-----------A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923261 38 -   3816255 ct----------------at---t----tt-a----------t------tca-tgtttacaaaa-g--a-----gaaat--tgaggca-----------g
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                     126917  3 -    137831 at----------------a---------------------------------------------------------------------------------
i Galago_moholi.ctg3793                                  C 0 N 0
s Galago_senegalensis.k141_991736                            10462  3 +     22493 at----------------a---------------------------------------------------------------------------------
i Galago_senegalensis.k141_991736                        C 0 N 0
s Galagoides_demidoff.k141_561628                            22545  3 -     32986 at----------------a---------------------------------------------------------------------------------
i Galagoides_demidoff.k141_561628                        C 0 n 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2475 40 -     28519 ct----------------at---t---ctt-a-----t----t------ccc-gttttataaaa-c--a-----taaat--tgagcca-----------g
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93142 40 -     95226 ga----------------at---t---ctt-a-----t----t------ccc-actatgtgaaa-c--aga-----aac--tgagtca-----------a
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 2 C 0
s Glis_glis.GliGli_scaffold_163929                            2623 40 -      6791 gt----------------ac---t---ctt-a-----t----t------ctc-attttacaaaa-c--a-----gaaat--tgaggca-----------g
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3586045                              19232 37 -     19819 CT----------------AT----------------------TCTT---CCA-ATTTTACAAAA-C--A-----GAAAC--AGACAAA-----------C
i Gorilla_beringei.k141_3586045                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 74149 37 +  33314783 ct----------------at----------------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Gorilla_gorilla.LT578336.1                             I 24 I 153
s Graphiurus_murinus.GraMur_scaffold_10447                    3689 39 -     78134 gt----------------at---t---ctt-a-----t----t------cct-gttttacaaaa-c--a-----gaaa---tgaggca-----------g
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16021 42 -     40692 at----------------at---t---ct-------------t---atttta-attttacaaat-g--a-----gaaattgaggcccg-----------g
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37420 42 +     49394 at----------------at---t---ct-------------t---atttta-attttacaaat-g--a-----gaaattgaggcccg-----------g
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62291 42 -     66874 at----------------at---t---ct-------------t---atttta-attttacaaat-g--a-----gaaattgaggcccg-----------g
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11162 42 -     42923 at----------------ag---t---ct-------------t---atttta-attttacaaat-g--a-----gaaattgaggcccg-----------g
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18164 42 -     53142 at----------------at---t---ct-------------t---atttta-attttacaaat-g--a-----gaaattgaggcccg-----------g
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32113 40 -    327341 ct----------------at---t----ttt-----gt----t------tct-attctacagaa-c--aga-----aat--tgaggca-----------a
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10808 40 +     48891 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--aga-----aac--agagtca-----------a
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 2 C 0
s Heterocephalus_glaber.JH602082.1                         1933683 38 -  22651954 ct----------------at---t----tt-----------gt------taa-attttacaaaa-g--a-----gaaat--tgaggca-----------g
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1553 40 +      8654 gt----------------gt---t---ctt-a-----t----t------tct-atttcaggaaa-g--a-----gaaat--tgaggca-----------g
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8951 40 -     36432 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--aga-----aac--tgagtca-----------a
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 2 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552949 40 -   1711038 at----------------at---t---ct-ca-----t----t------ccc-attctacaaaa-a--gga-----aat--tgaggca-----------g
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2386 40 -      2730 at----------------at---t---ctt-a-----t----t------ctc-attctacaaaa-a--gga-----aat--tgaggca-----------a
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144121 40 -    630532 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71479 40 +     83186 ca----------------at---t----ttt-----gt----t------tcc-attctacagaa-c--aga-----aat--tgaggca-----------a
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73103 37 +    143317 ct----------------at---t----tt------------t------tct-attttttaaac-t--a-----gacat--tgagaca-----------c
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7166 36 +     12352 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--ag----a-----------c
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14350 36 +     55766 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--ag----a-----------c
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053950 36 + 191637585 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--ag----a-----------c
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802828 36 +  11177569 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--ag----a-----------c
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8436 39 -    135385 ct----------------at---t----ttta----------t------tcc-attttacaaat-t--a-----gaaat--ggaagca-----------g
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388160 33 +   7955117 -t----------------at---t----ttca-----t----t------ctc-atttcataaaa-t--a-----aaaat--tg-----------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3710 42 +     11955 at----------------at---t---ct-------------t---atttca-attttacaaaa-g--a-----gaaattgaggccca-----------g
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11344 40 -     16823 ga----------------at---t---ctt-a---------ct------ccc-actgtacaaaa-c--aga-----cac--gaagtca-----------a
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 2 C 0
s Jaculus_jaculus.JH725527.1                               1241342 39 +   9596543 at----------------ac---t---ctt-a---------ct------acc-attttatcaaa-c--a-----gaaat--tgagtca------------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73184 38 -     97402 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--aga-----cac----agtca-----------a
i Kogia_breviceps.KogBre_flattened_line_3970             I 2 C 0
s Lagothrix_lagothricha.k141_246028                          44569 32 +    110728 ct----------------gt---t----tt------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64501 36 -     65777 tt----------------at---t---ctt-a-----t----t------ccc-attctgtgaaa-c--a-------aat--ggagg-------------c
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760818 42 +  30322482 at----------------at---t---ct-------------c---atttta-attttacaaat-g--a-----gaaattgaggcccg-----------g
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5476 32 -     13097 ct----------------gc---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5230 32 +      5940 ct----------------gc---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5053 32 -      5717 CT----------------GC-------------------TCTT------CCA-ATTTTACTAAA-C--T-----GAGAC--AGA----------------
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      206 32 +      8855 CT----------------GT-------------------TGTT------CCA-ATTTTACAAAA-C--C-----GAGAC--AGG----------------
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5008 32 -     13645 CT----------------GT-------------------TCTT------CCA-ATTTTACAAAA-C--C-----GAGAC--AGG----------------
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10334 42 +     29618 at----------------at---t---ct-------------t---attcca-attttacaaaa-a--a-----gaaattgaggcccg-----------g
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10330 42 +     31569 at----------------at---t---ct-------------t---attcca-attttacaaaa-a--a-----gaaattgaggcctg-----------g
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10340 42 +     24756 at----------------at---t---ct-------------t---attcca-attttacaaaa-a--a-----gaaattgaggcccg-----------g
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10340 42 +     16388 at----------------at---t---ct-------------t---attcca-attttacaaaa-a--a-----gaaattgaggcccg-----------g
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814816 40 -   3914936 ct----------------gt---t----ttt-----gt----t------ccc-attctgaagaa-c--aga-----gat--tgaggca-----------a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342529 40 +    662738 ga----------------at---t---ctt-a---------ct------ccc-actctacaaaa-c--a--gc---cac--gaagtca-----------a
i Lipotes_vexillifer.KE559953.1                          I 2 C 0
s Lophocebus_aterrimus.ctg367                               335474 37 -   1826925 ct----------------at---t---ct-------------t------cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2031736                           12629  3 +     19643 at----------------a---------------------------------------------------------------------------------
i Loris_lydekkerianus.k141_2031736                       C 0 N 0
s Loris_tardigradus.ctg83                                  5046299  3 -   6120653 at----------------a---------------------------------------------------------------------------------
i Loris_tardigradus.ctg83                                C 0 I 43557
s Loxodonta_africana.GL010049.1                           39086217 40 +  43346337 gt----------------at---t---ctt-a-----t----t------cct-atctcacataa-t--a-----gaaat--tgaggca-----------g
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615852 40 +  59628241 ct----------------at---t----ttt-----gt----a------ccc-attctacagga-c--a--gc---aat--tgagata-----------a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46863 40 -     61512 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374525 40 -  60120075 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26793 40 +     30207 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1631 40 -      5035 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26746 40 +     30527 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37922 40 -     50087 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47666 40 +     51645 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416869 40 - 187317192 CT----------------GT-------------------TCTTCTT---CCA-Attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401099 40 +  25927173 CT----------------AT-------------------TCTTCTT---CCa-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50271 40 -     62418 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2802 40 +     14901 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46743 40 +     59329 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272651 40 +    668171 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1283 40 -      5049 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4449 40 +     17132 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224576 40 -    270270 ct----------------ac---t---ctt------gt----t------tcc-attttgcaaaa-c--aga-----aat--tgaggtg-----------g
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323939 40 +  24302211 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358770 40 -    752769 ct----------------at---t---ct-------------tctt---gca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674858 40 -    737560 ct----------------at---t---ctt-a-----t----t------tcc-attctacaaaa-c--aga-----aat--tgaggta-----------g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222158 40 +    317179 ct----------------at---t---ctt-aa---------t------tcc-attctacaaaa-c--aga-----aat--tgaggta-----------g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502374 32 +  40650429 -t----------------at---t----ttta-----t----t------ctc-atttcataaaa-t--a------aaat--tg-----------------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151729 36 +    207569 ct----------------at---t---gtt-a-----t----c------ccc-attctacaaaa-t--aga-----aat--tgag---------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 19
s Mellivora_capensis.MelCap_flattened_line_19308             27544 40 -     74585 ct----------------at---t----ttt-----gt----t------ccc-attctacaaaa-c--aga-----gat--taagaga-----------a
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52121 39 -    140813 -t----------------gt---t----tgta-----t----t------cat-attttacaaag-t--a-----gtagt--cgaggca-----------c
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 59
s Mesoplodon_bidens.MesBid_scaffold_6114                     88813 40 +     93471 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--aga-----cac--gaagtca-----------a
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 2 C 0
s Mico_argentatus.k141_582562                                11598 32 +     17804 ct----------------gt---t---ct-------------t------cca-attttacaaaA-C--C-----GAGAC--AGA----------------
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12098 32 -     12984 ct----------------gt---t---ct-------------t------cca-attttacaaaA-C--C-----GAGAC--AGA----------------
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20417 32 -     26561 ct----------------gt---t---ct-------------t------cca-attttacaaaA-C--C-----GAGAC--AGA----------------
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986172 42 +  93316391 AT----------------AT------CCt-------------t---attcca-attttacaaat-g--a-----gaaattgaggccca-----------g
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48036 20 +    145209 ----------------------------------------------------------acaaag-c--a-----gaaat--tgagg-c-----------t
i Microgale_talazaci.MicTal_scaffold_6613                I 19 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186400 36 +    200668 ct----------------at---t---ctt------gt----t------ccc-actgcacagaa-c--t-------gat--tgagg-------------c
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965150 39 +  27267610 -T----------------GT----------------TTGCATT------CAT-ATTTGATAAGA-T--A-----GTAGT--tgaggca-----------t
i Microtus_ochrogaster.CM001695.1                        C 0 I 89
s Miniopterus_natalensis.LDJU01000034.1                    6364560 24 -   8254450 --------------------------------------------------cc-attctgaaaag-c--a-------aat--tgagg-------------c
i Miniopterus_natalensis.LDJU01000034.1                  I 8 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43480 24 -     48117 --------------------------------------------------cc-attctgaaaag-c--a-------aat--tgagg-------------c
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 8 C 0
s Miopithecus_ogouensis.k141_1534655                         24039 40 -     27822 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9827 40 +     27589 CT----------------GT----------------TTTTGTT------CCC-ATTCTGAAGAA-C--A---GA--GAT--TGAGGCA-----------A
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53947 42 -     62432 at----------------at------cct-------------t---attcca-attttacaaat-g--a-----gaaattgagacccg-----------g
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360918 40 +    437263 TA----------------AT----------------TCTTACT------CCA-ACTGTACAAAA-C--A---GA--CAC--AAAATCA-----------A
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180645 36 +    366855 ct----------------ac---t---ctt-a-----t----t------ccc-attacacagaa-c--t-------agt--tgagg-------------c
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27253 40 -     82753 ga----------------at---t---ctt-a-----t----t------ccc-gctctacaaaa-c--aga-----aac--tgagtca-----------a
i Moschus_moschiferus.MosMos_scaffold_13123              I 2 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19847 40 -     63510 ct----------------at---t----ttt-----gt----t------tct-attctacagaa-c--aga-----aat--tgaggca-----------c
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42505 36 +     47283 ct----------------at---t---ctt-a-----t----t------ccc-attctataaaa-c--a-------aat--tgagg-------------c
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596321 39 + 120012414 -T----------------GT----------------TTGTATT------CAT-ATTTGACAAAA-C--A-----TTAgt--tgaggca-----------g
i Mus_caroli.LT608237.1                                  C 0 I 106
s Mus_musculus.chr8                                       41689517 39 + 129401213 -T----------------GT----------------TTGTATT------CAT-ATTTGACAAAA-C--A-----TTAgt--tgaggca-----------g
i Mus_musculus.chr8                                      C 0 I 84
s Mus_pahari.LT608297.1                                   58217860 39 +  89631738 -T----------------GT----------------TTGTCTT------CAT-ATTTGACAAAA-C--A-----TTAGT--TGAGgca-----------c
i Mus_pahari.LT608297.1                                  I 1 I 34
s Mus_spretus.CM004101.1                                  39498801 39 + 130317789 -T----------------GT----------------TTGTATT------CAT-ATTTGACAAAA-C--A-----TTACT--TGAAGCA-----------G
i Mus_spretus.CM004101.1                                 C 0 I 84
s Muscardinus_avellanarius.MusAve_scaffold_12866             85527 40 -     86153 gt----------------at---t---ctt-a-----t----t------tcg-attttacaaaa-c--a-----gaaat--tgaggca-----------g
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356442 41 +  14710649 ct----------------at---t----ttt------tgt--t------tcc-attctaTAGAA-C--A---GA--GAT--TAAGATA-----------A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64402 38 +     67721 ct----------------gt---t----tt-----------gt------cac-attttccaaac-t--a-----gaaag--tgaggca-----------g
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794767 36 +  10118263 ct----------------at---t---ctt-a-----t----t------ccc-attttataaag-c--a-------aat--tgagg-------------c
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388942 36 +   6019432 ct----------------at---t---ctt-a-----t----t------ccc-attttataaac-c--a-------aat--tgagg-------------c
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               384970 36 +   4330536 ct----------------at---t---ctt-a-----t----t------ccc-attttataaag-c--a-------aat--tgagg-------------c
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3755 36 +     18357 ct----------------at---t---ctt-a-----t----t------ccc-attttataaag-c--a-------aat--agagg-------------c
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121102 39 +    130748 ct----------------at---t---ctt-a-----t----t------tct-ac-ttacaaaa-t--a-----gaaat--taaggcA-----------G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             948016 36 +   3037898 CT----------------A-------Actt------gt----t------tcc-attttataaaa-c--a-----ggaat--ggaga--------------
i Nannospalax_galili.KL204047.1                          C 0 I 47
s Nasalis_larvatus.k141_1350636                              30761 40 +     34575 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233584 40 -   7148211 ga----------------at---t---ctt-a---------ct------ccc-actgtacaaaa-c--aga-----cac--gagatca-----------a
i Neophocaena_asiaeorientalis.KZ687982.1                 I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129256 36 -    149072 ct----------------at---ta---tt-a-----t----t------tcc-cttcaacagca-c--t-------gat--tgagg-------------c
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55052 40 -    132029 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11147 40 -     16345 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17032 40 +     22201 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415253 40 -  22158432 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27430 40 -     54323 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199448 40 +   9404916 ct----------------at---t----ttt-----gt----a------ccc-attctacagga-c--a--gc---aat--tgaggta-----------a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2558223 15 -   3988456 -----------------------------------------------------------------C--A-----GAAAT--TGaggca-----------g
i Ochotona_princeps.JH802162.1                           I 11 C 0
s Nycticebus_bengalensis.LG01                             93639522  3 + 196305487 at----------------a---------------------------------------------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 N 0
s Nycticebus_coucang.k141_1296080                             2125  3 -      9413 at----------------a---------------------------------------------------------------------------------
i Nycticebus_coucang.k141_1296080                        C 0 N 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1        93566905  3 - 199412804 at----------------a---------------------------------------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 N 0
s Octodon_degus.JH651603.1                                11056492 38 -  11899542 tt----------------at---t----tt-----------gt------cat-attttataaac-t--a-----ggaag--tgaggca-----------g
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453245 40 +   2017862 ct----------------gt---t----ttt-----gt----t------ccc-attctaaagaa-c--aga-----gat--tgaggca-----------a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         438340 40 -    630418 ga----------------at---t---ctt-a-----t----t------ccc-actctgcaaaa-c--aga-----aac--tgagtca-----------a
i Odocoileus_virginianus.KZ100018.1                      I 2 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16224 40 +    150152 ga----------------at---t---ctt-a-----t----t------ccc-actatgtgaaa-c--aga-----aac--tgagtca-----------a
i Okapia_johnstoni.LVCL01S0005463.1                      I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95821 39 -    140218 -t----------------gt---t----tgta-----t----t------tat-atttgacaaga-t--a-----gtagt--tgaggca-----------c
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 37
s Onychomys_torridus.OnyTor_scaffold_28377                    6367 39 -     41509 -T----------------GT----------------TTGTATT------Cat-atttgatagaa-c--a-----gtagt--ttaggta-----------c
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 63
s Orcinus_orca.KB316932.1                                  8103987 40 +  10937097 ga----------------at---t---ctt-a---------ct------ccc-actgtacaaaa-c--aga-----ttt--tttttca-----------a
i Orcinus_orca.KB316932.1                                I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1287 40 +     11607 gt----------------aa---t----ttta---------ct------cct-atttcacaaaa-c--a-----gaaat--ttaggca-----------g
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40494 40 +    559221 ct----------------at---t----ttt-----gt----a------ccc-attctgcagga-c--a--gc---aat--tgaggta-----------a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_649260                        42076  3 -     51505 at----------------a---------------------------------------------------------------------------------
i Otolemur_crassicaudatus.k141_649260                    C 0 N 0
s Otolemur_garnettii.GL873799.1                             355081  3 +   1103335 at----------------a---------------------------------------------------------------------------------
i Otolemur_garnettii.GL873799.1                          C 0 N 0
s Ovis_aries.CM001607.2                                   26405935 40 -  44047080 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--aga-----aac--agagtca-----------g
i Ovis_aries.CM001607.2                                  I 2 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6454 40 +     17875 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--aga-----aac--agagtca-----------g
i Ovis_canadensis.OviCan_scaffold_67953                  I 2 C 0
s Pan_paniscus.AJFE02001033.1                                  404 31 +      1169 CT----------------AT----------------------TCTT---CCA-ATtttacaaaa-c--a-----ga------------caaa-------c
i Pan_paniscus.AJFE02001033.1                            C 0 C 0
s Pan_troglodytes.KZ622849.1                                 36386 41 -    110857 CT----------------GTTCT-------------------TCTT---CCA-attttacaaaa-c--a-----gaaac--agacaaaca----------
i Pan_troglodytes.KZ622849.1                             I 24 I 70
s Panthera_onca.PanOnc_flattened_line_3271                   25844 40 -    230217 gt----------------at---t----ttt-----gt----t------tcc-attctgcagaa-c--aga-----tat--tgaggca-----------a
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463170 40 -  18783137 gt----------------at---t----ttt-----gt----t------tcc-attctgcagaa-c--aga-----tat--tgaggcA-----------A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973829 40 +   8748460 gt----------------at---t----ttt-----gt----t------tcc-attctgcagaa-c--aga-----tat--tgaggcA-----------A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617460 40 +   2937107 ga----------------at---t---ctt-a-----t----t------ccc-actctacaaaa-c--aga-----aac--agagtca-----------a
i Pantholops_hodgsonii.KE114653.1                        I 2 C 0
s Papio_anubis.CM001495.2                                   244948 40 - 183742232 CT----------------AT-------------------TCTTCTT---CCA-Attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11233 40 +     21308 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  293976 40 -  20919399 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23883 30 -     27687 ---------------------------------------------t---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Papio_kindae.k141_2214839                              I 2 C 0
s Papio_papio.k141_3538738                                     552 40 +     10553 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   512 40 -     10386 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16427 40 +     78924 ct----------------at---t----ttt-----gt----t------tcc-attccacagaa-c--aga-----aat--cgaggca-----------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1921260                          28408  3 +     31479 at----------------a---------------------------------------------------------------------------------
i Perodicticus_ibeanus.k141_1921260                      C 0 N 0
s Perodicticus_potto.k141_1854441                            20776  3 -     24908 at----------------a---------------------------------------------------------------------------------
i Perodicticus_potto.k141_1854441                        C 0 N 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3229 40 +      9367 CT----------------AT----------------TCATAAT------CTC-ATTTGACCAAA-C--A-----TAAAT--TGAAACA-----------A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249587 39 +  18517816 -t----------------gt---t----tgta-----t----t------cat-ATTTGACAAAA-C--A-----GTAgt--ttaggca-----------c
i Peromyscus_maniculatus.KI615324.1                      C 0 I 63
s Petromus_typicus.PetTyp_scaffold_17301                     33264 36 -     56120 ct----------------at---t----tt-a----------t------tca-gttttacat---t--a-----taaat--tgaggca-----------g
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5512 40 -     63832 ga----------------at---t---ctt-a---------ct------ccc-actgtacaaaa-c--aga-----cac--gaaatca-----------a
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 2 C 0
s Piliocolobus_badius.k141_2704958                            4198 40 +     55023 ct----------------at----------------------tcttcttcca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3668 37 -     89929 ct----------------at----------------------tctt---cca-attttacaaaa-c--a-----gaaac--aggcaaa-----------c
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4258 37 +     40849 ct----------------at----------------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255933 37 +  14605196 CT----------------AT----------------------TCTT---CCa-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5338 33 +     22231 ct----------------at---ta---t-------------t------tcc-attctataaaa-c--a-------aat--tgagg-------------c
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66111 32 +    207309 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7199 32 -     25401 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32947 32 +     58159 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33223 32 +     63561 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           32983 32 +     51148 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557953 32 -   4542175 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32967 32 +     51125 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2529 40 +     19503 GA----------------AT----------------TCTTATT------CCT-ACTCTACAAAA-C--A---GA--CAC--GAAGTCA-----------A
i Platanista_gangetica.PlaMin_flattened_line_83166       I 2 C 0
s Plecturocebus_bernhardi.k141_2549090                        9385 32 +     39866 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4467 32 -      9282 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--AGT----------------
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43871 32 -     87950 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--AGT----------------
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44265 32 -     88961 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8963 32 -     39403 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--AGT----------------
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43914 32 +     87928 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--AGT----------------
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8962 32 -     60166 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15899 32 -     67232 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43815 32 -     90634 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45282 32 +     89403 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   180809 37 - 189387572 CT----------------AT----------------------TCAT---CCA-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195549 37 -   9816681 CT----------------AT----------------------TCGT---CCA-ATTTTACAAAA-C--A-----GAAAC--AGACAAA-----------C
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29343 40 +     69807 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46524 40 -     80239 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5544 40 +      7663 gt----------------gt---t---ctt-a-----t----t------cct-atttcaggaaa-g--a-----gaaat--tgaggca-----------g
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1983966 42 +   4620579 at----------------at---t---ct-------------t---atttta-attttacaaat-g--a-----gaaattgaGGCCCG-----------G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567461 42 -   2598838 at----------------at---t---ct-------------t---atttca-attttacaaaa-g--a-----gaaattgaggccca-----------g
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5099 42 -      7103 at----------------at---t---ct-------------t---atttca-attttacaaaa-g--a-----gaaattgaggccca-----------g
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5696 42 -     11706 at----------------at---t---ct-------------t---atttca-attttacaaaa-g--a-----gaaattgaggccca-----------g
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9433 42 -     30655 at----------------at---t---ct-------------t---atttca-attttacaaaa-g--a-----gaaattgaggccca-----------g
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35747 42 +     46564 at----------------at---t---ct-------------t---atttca-attttacaaaa-g--a-----gaaattgaggccca-----------g
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96026 42 -     98465 at----------------at---t---ct-------------t---atttca-attttacaaaa-g--a-----gaagttgaggccca-----------g
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9665 42 +     35169 at----------------at---t---ct-------------t---atttca-attttacaaaa-g--a-----gaaattgaggccca-----------g
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39646 39 +     52041 -T----------------GT----------------TTGTATT------CAT-ATTTTACAAAG-C--A-----GTAGT--caaggca-----------c
i Psammomys_obesus.NESX01036366.1                        C 0 I 57
s Pteronotus_parnellii.KE847780.1                            53538 36 -     66298 tt----------------at---t---ctt-a-----t----t------ccc-attctacagaa-c--t-------att--tgagg-------------c
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6022 40 -     18639 ct----------------at---t----ttt-----gt----t------ccc-attctacagaa-c--aga-----gat--taagaga-----------a
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842146 40 -  28871421 ct----------------ac---t---ctt-a-----t----t------ccc-attctgcaaaa-c--aga-----aat--tgaggtg-----------g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538661 40 -   4952924 ct----------------ac---t---ctt------gt----t------ccc-attctgcaaaa-c--aga-----aat--tgaggtg-----------g
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100484 40 +  38429054 gt----------------at---t----ttt-----gt----t------tcc-attctgcagaa-c--aga-----tat--tgaggcA-----------A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28710 40 +     91421 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155262 40 -   7812017 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9567 40 +     72585 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   385 40 -     55207 ga----------------at---t---ctt-a-----t----t------ccc-actctgcaaaa-c--aga-----aac--tgagtca-----------a
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 2 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916101 40 +   3329780 at----------------at---t---ctt-a-----t----t------ccc-attctacaaaa-a--gga-----aat--tgaggca-----------c
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3229 40 +      7119 ct----------------at---t---ct-------------tctt---cca-gttttacaaaa-c--a-----gaaaa--agacaaa-----------c
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123844 40 + 195417433 CT----------------AT-------------------TCTTCTT---CCA-Gttttacaaaa-c--a-----gaaac--agacaaa-----------c
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238071 40 -   7961872 ct----------------at---t---ct-------------tctt---cca-gttttacaaaa-c--a-----gaaac--agacaaa-----------c
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76646 40 -    116970 ct----------------ac---t---ctt------gt----t------ctc-attctccaaaa-c--aga-----aat--tgaggtg-----------g
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                340 32 -      1130 ct----------------gc---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5242 32 +      6077 ct----------------gc---t---ct-------------t------cca-attttacagaa-c--t-----gagAC--AGA----------------
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5336 32 +      5971 ct----------------gc---t---ct-------------c------cca-attttacaaaa-c--t-----gagac--aga----------------
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5253 32 +      5932 ct----------------gc---t---ct-------------c------cca-attttacaaaa-c--t-----gagac--aga----------------
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3598 32 -      4390 ct----------------gc---t---ct-------------c------cca-attttacaaaa-c--t-----gagac--aga----------------
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393355 32 - 209938924 ct----------------gc---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5201 32 +      5979 ct----------------gc---t---ct-------------c------cca-attttacaaaa-c--t-----gagac--aga----------------
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1771 32 -     22275 ct----------------gc---t---ct-------------t------cca-attttacagaa-c--t-----gagAC--AGA----------------
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9623 34 +     16473 gA----------------AT----------------------T------CCC-ACTCTACAAAA-C--A---GA--AAC--AGAGTCA-----------A
i Saiga_tatarica.SaiTat_scaffold_39512                   I 2 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110364 32 + 121099817 CT----------------GT-------------------TCTT------CCA-GTTTTACAAAA-C--T-----GAGAC--AGA----------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31931 32 -     47369 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32317 32 -     79414 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29008 32 -     34454 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16409 32 -     22428 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31563 32 -     47109 ct----------------gt---t---ct-------------t------cca-gttttacaaaa-c--t-----gagac--aga----------------
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239615 32 +   5703754 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9205 32 +     21866 ct----------------gt---t---ct-------------t------cca-attttacaaaa-c--t-----gagac--aga----------------
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116955 38 +    313613 ------------------CT----------------TTTTATT------CTG-ACTATAGAAAA-CAGA-------AAT--TGAGGCA-----------C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_158471                         26894 40 +     27374 ct----------------ag---t---ct-------------tctc---gca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Semnopithecus_entellus.k141_158471                     C 0 N 0
s Semnopithecus_hypoleucos.k141_1910531                      30542 40 +     58920 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17040 40 -     45317 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24698 40 -     42441 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27376 40 -     29113 CT----------------CG-------------------TCTTCTT---GCA-ATTTTACAAAA-C--A-----GAAAC--AGACAAA-----------C
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30451 40 -     48123 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51380 38 +     77746 -T----------------G-----------------TTGTATT------CAT-ATTGGACAAAA-C--A-----GTAGT--TGatgcg-----------c
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 69
s Solenodon_paradoxus.SolPar_flattened_line_126            1865492 38 -   1910179 ct----------------at---t---ctt-a-----t----t------ccc-attatccaaaa-c--a-------aat--tgaggca-----------g
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672579 26 +  18376816 CT----------------AG----------------TCTTTCT------CTT-TATATACAAAA-C----------------------------------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869738 33 +   3870691 -t----------------at---t----ttta-----t----t------ctc-atttcataaaa-t--a-----aaaat--tg-----------------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8097 40 -     97271 ct----------------at---t----ttt-----gt----t------ccc-attctacaaaa-c--aga-----gat--taagaca-----------a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126264 40 +    196729 ct----------------at---t----ttt-----gt----t------tct-attctacagaa-c--aga-----aat--tgagaca-----------a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645303 40 +  69701581 ct----------------at---t---ct-ca-----t----t------ccc-actctacaaaa-t--aga-----aac--tgagtca-----------a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392518 40 +   1523678 ct----------------at---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15678 36 +     22964 ct----------------at---t---ct-ca---------ct------ccc-attctacaaaa-c--a-------aat--tgagg-------------c
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4094 49 +      5583 CT----------------CG------TAAACTGGAGGTTTATT------TCT-GT-TTACAAAA-T--A-----GAAAT--TACGGCA-----------G
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      192988 40 +    199430 ct----------------at---t---ctt-a-----t----t------cct-attccacaaaa-c--aga-----aat--tgaggca-----------g
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106956 40 -    539355 ct----------------at---t---ctt-a-----t----t------cct-attctacaaaa-c--aga-----aat--tgaggca-----------g
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                2025 41 +      9917 ct----------------at---t---ct-------------t---attcca-attttacaaaggc--a-----gaaat--tgaggca-----------g
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8823 41 +     20590 ct----------------at---t---ct-------------t---attcca-attttacaaaggc--a-----gaaat--tgaggca-----------g
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354757 40 - 186847797 CT----------------AG-------------------TCTTCTT---CCA-Attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25417 36 -     33621 at----------------at---t----tt-a----------t------tca-cttttacag---t--a-----gaaat--tgaggca-----------g
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21050 40 -     31044 ct----------------at---t---ctt-a-----t----t------ccc-attttacaaaa-c--a-----gaaat--tgaggca-----------g
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481530 36 -    610378 ct----------------at---t---ctt-a-----t----t------ccc-attgcacagaa-c--t-------gat--tgagg-------------c
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22507 40 +     26378 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35251 40 -     78344 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21832 40 +     25722 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30207 40 -     62838 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30251 40 +     46913 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         10990 40 -     28527 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32142 40 -     64340 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30180 40 -     63452 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11627 40 +     22490 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5050 40 -      6147 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        11963 40 -     13050 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257125 40 -   6242583 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3221 40 +     19340 ct----------------ag---t---ct-------------tctt---cca-attttacaaaa-c--a-----gaaac--agacaaa-----------c
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175236 40 -    200418 ga----------------at---t---ctt-a-----t----t------ccc-actttatgaaa-c--aga-----aac--ggagtca-----------g
i Tragulus_javanicus.TraJav_scaffold_3462                I 2 C 0
s Trichechus_manatus.JH594705.1                            6482906 40 -  10818551 gt----------------at---t---ctt-a-----t----t------cct-atttcacaaaa-c--a-----gaaac--tgaggca-----------g
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836472 25 -   4065304 ------------------------------------------------------tttaacaaag-g--a-----gaggt--tgaggca-----------g
i Tupaia_chinensis.KB320699.1                            I 24 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10494 25 -     70247 ------------------------------------------------------tttaaacaaa-g--a-----ggggt--tgaggca-----------g
i Tupaia_tana.TupTan_flattened_line_394                  I 11 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367112 40 -  33153633 ga----------------at---t---ctt-a---------ct------ccc-actgtacaaaa-c--aga-----cac--taaatca-----------a
i Tursiops_truncatus.MRVK01000835.1                      I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4912 40 -     21056 CT----------------GT----------------TTTAATT------CCA-TGTGTACACAG-CTGA-------AAT--TGAGGTA-----------C
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183465 40 +   5085361 ct----------------at---t----ttt-----gt----t------ccc-attctgcagaa-c--aga-----gat--tgaggta-----------a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26619 42 -     30710 at----------------at---t----tt------------t---attcca-attttacaaat-g--a-----gaaattgaggccca-----------g
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25526 42 -    147434 at----------------at---t----tt------------t---attcca-attttacaaat-g--a-----gaaattgaggccca-----------g
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77645 40 +   5488506 ct----------------gt---t---cttt------t----c------ccc-actctacaaaa-c--aga-----aac--tgaggca-----------a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106217 40 -    112863 ct----------------at---t----ttt-----gt----a------ccc-attctacagga-c--a---gt--aat--tgaggTA-----------A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175492 34 -    224448 ct----------------at---t----ttta-----t----t------ctc-attttacaaaa-c--a-----gaaat--tg-----------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30457 40 -     86975 ct----------------gt---t----ttt-----gt----t------ccc-attctaaagaa-c--aga-----gat--tgaggcA-----------A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1292 36 -      1899 AT----------------AG----------------TCTCATT------CCC-ATTTTACTAAG-C--A-----GGAAT--TCAG---------------
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Rattus_norvegicus.chr16                                 37024511 126 -  90668790 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8390 2 +     36723 AG
s Acinonyx_jubatus.LLWD01001279.1                           814265 2 +   1699592 GG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27648 2 +     63021 at
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 128 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416933 2 +  29979442 gg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            217053 2 +    347723 gg
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19895 2 -     61208 ag
i Allactaga_bullata.AllBul_scaffold_20030                I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49549 2 +     53615 ag
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1576 2 +     13857 AG
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18131 2 -     21945 ag
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19816 2 +     32033 ag
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587108 2 +   2318259 ag
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178530 2 -    412891 ag
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52185 2 -     68529 ag
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      24908 2 -     32367 AG
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 12 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6787 2 -     15198 cg
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Avahi_laniger.k141_2756659                                  7609 2 +     11645 ag
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7617 2 -     19611 ag
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964875 2 -  23207421 ag
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1375 2 -     25979 ag
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88115 2 +    124022 ag
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23644 2 +    288883 ag
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20358034 2 +  48749331 ag
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756598 2 +   1948126 ag
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546740 2 -  45695690 ag
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531748 2 -   4408762 ag
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632349 2 +  17673402 ag
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666636 2 +   7040546 ag
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210294 2 +   1652518 ag
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506623 2 +  60362399 ag
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10259 2 -     23171 AG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223602 2 +   9314153 ag
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616737 2 +  59632846 ag
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108318 2 -  63665305 ag
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410837 2 -  46296322 ag
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26593111 2 +  44709034 ag
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    852 2 -      1607 GG
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272153 2 +    496798 AG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1657 2 +      9923 ag
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29022 2 -     39886 ag
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80945 2 -    217609 ag
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997749 2 +  23392119 ag
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001191 2 +  23407841 ag
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64270 2 -     66877 ag
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4113 2 -      5494 ag
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493564 2 -  27778364 ag
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20397 2 +     27315 ag
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142629 2 -   4669795 ag
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46368 2 +     47900 ag
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1801 2 -     14410 ag
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46185 2 -    148725 ag
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28463 2 -     40656 ag
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8422 2 +     20796 AG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13536 2 -     17524 ag
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29268 2 -     34525 ag
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13048 2 -     25376 ag
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365635 2 -  39242232 ag
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271362 2 +  21565898 ag
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33727 2 -     45857 ag
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28628 2 -     32606 ag
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4791 2 +      8499 ag
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27189 2 +     70610 ag
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24150 2 +     36323 ag
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            13994 2 -     19938 ag
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 13
s Cheirogaleus_major.k141_666340                             32021 2 -     33796 ag
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6519 2 -     15404 ag
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240082 2 -   2543920 ag
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                                345051 2 +  18827391 ag
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11590 2 -     44032 ag
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306442 2 - 135778131 aG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  257 2 +     10270 ag
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 I 13
s Choloepus_hoffmanni.KN194906.1                            607733 2 -    839153 ag
i Choloepus_hoffmanni.KN194906.1                         C 0 I 13
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                 61 2 -      4087 TG
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          I 39 C 0
s Colobus_angolensis.KN981557.1                             410847 2 -   2368649 ag
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380731 2 - 200372422 ag
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4288 2 -     84244 ag
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808289 1 +  53390261 -G
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4147 2 -      8242 aa
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46217 2 -     83289 GG
i Cricetomys_gambianus.CriGam_scaffold_14425             I 24 C 0
s Cricetulus_griseus.LT883664.1                          213117992 2 - 224834208 AG
i Cricetulus_griseus.LT883664.1                          I 97 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5720 2 +     87169 gg
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646758 2 -   1526836 ag
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19920 1 +     50838 -G
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5655 2 +     36344 ag
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29444 2 +     75252 aa
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111360 2 -   2246927 AG
i Dasypus_novemcinctus.JH564415.1                        C 0 I 13
s Daubentonia_madagascariensis.ctg71                        293922 2 +  12879189 ag
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633281 2 -  35494412 ag
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866646 2 -  20541912 ag
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665836 2 -   1390856 ag
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140636 2 -    198055 ag
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100149 2 -    115145 ag
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951928 2 -  37912305 GG
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6862 2 -     10735 GG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856874 2 - 111700974 TG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7633 2 +     19438 ag
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241465 2 -    607251 ag
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1227077 2 +  10337057 ag
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33858 2 +    110024 gg
i Ellobius_lutescens.LOEQ01008920.1                      I 125 C 0
s Ellobius_talpinus.LOJH01026522.1                           15794 2 +     18970 gg
i Ellobius_talpinus.LOJH01026522.1                       I 54 C 0
s Enhydra_lutris.KZ291758.1                               24917465 2 +  41312741 ag
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580239 2 +  14770903 ag
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042781 2 -   4378816 ag
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376720 2 +  39960074 ag
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412702 2 -    498745 ag
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667486 2 +   7059049 AA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264580 2 +  21539334 AG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72489 2 -    133382 ag
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               202 2 +     25849 ag
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16138 2 -     24895 ag
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43848 2 -     70999 ag
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87818 2 +    112731 ag
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44381 2 +     68309 ag
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54705 2 -     65740 ag
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25338 2 -     75513 ag
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49532 2 -     97555 ag
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6256 2 +     30972 ag
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43976 2 -     52037 ag
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60379 2 -    111500 ag
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248175 2 - 206538554 GG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117961 2 - 205367284 GG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 29061 2 -     30238 GG
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923299 2 -   3816255 ag
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2515 2 -     28519 gg
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93182 2 -     95226 ag
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2663 2 -      6791 ag
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3586045                              19269 2 -     19819 AG
i Gorilla_beringei.k141_3586045                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                257690 2 - 186649187 ag
i Gorilla_gorilla.LT578341.1                             I 29 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3728 2 -     78134 ag
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16063 2 -     40692 ag
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37462 2 +     49394 ag
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62333 2 -     66874 ag
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11204 2 -     42923 ag
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18206 2 -     53142 ag
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32153 2 -    327341 gg
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10848 2 +     48891 ag
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933721 2 -  22651954 ag
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1593 2 +      8654 ag
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8991 2 -     36432 ag
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552989 2 -   1711038 ag
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2426 2 -      2730 ag
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144161 2 -    630532 ag
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71519 2 +     83186 gg
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73140 2 +    143317 ag
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7202 2 +     12352 ag
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14386 2 +     55766 ag
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053986 2 + 191637585 ag
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802864 2 +  11177569 ag
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8475 2 -    135385 aa
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Indri_indri.k141_2415743                                    3752 2 +     11955 ag
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11384 2 -     16823 ag
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241381 1 +   9596543 -g
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73222 2 -     97402 ag
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64537 2 -     65777 ag
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760860 2 +  30322482 ag
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10376 2 +     29618 ag
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10372 2 +     31569 ag
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10382 2 +     24756 ag
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10382 2 +     16388 ag
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814856 2 -   3914936 gg
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342569 2 +    662738 ag
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335511 2 -   1826925 ag
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086257 2 +  43346337 ag
i Loxodonta_africana.GL010049.1                          C 0 I 2
s Lycaon_pictus.CM007581.1                                41615892 2 +  59628241 ag
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46903 2 -     61512 ag
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374565 2 -  60120075 ag
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26833 2 +     30207 ag
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1671 2 -      5035 ag
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26786 2 +     30527 ag
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37962 2 -     50087 ag
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47706 2 +     51645 ag
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416909 2 - 187317192 ag
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401139 2 +  25927173 ag
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50311 2 -     62418 ag
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2842 2 +     14901 ag
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46783 2 +     59329 ag
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272691 2 +    668171 ag
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1323 2 -      5049 ag
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4489 2 +     17132 ag
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224616 2 -    270270 ag
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323979 2 +  24302211 ag
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358810 2 -    752769 ag
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674898 2 -    737560 ag
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222198 2 +    317179 ag
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27584 2 -     74585 ag
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52219 2 -    140813 AT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 59 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88853 2 +     93471 ag
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986214 2 +  93316391 ag
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48056 2 +    145209 cg
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186436 2 +    200668 ag
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965278 2 +  27267610 GG
i Microtus_ochrogaster.CM001695.1                        I 89 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364584 2 -   8254450 at
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43504 2 -     48117 ag
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24079 2 -     27822 ag
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9867 2 +     27589 GG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53989 2 -     62432 ag
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360958 2 +    437263 AG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180681 2 +    366855 ag
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27293 2 -     82753 ag
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19887 2 -     63510 gg
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42541 2 +     47283 ag
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596466 2 + 120012414 ag
i Mus_caroli.LT608237.1                                  I 106 I 3
s Mus_musculus.chr8                                       41689640 2 + 129401213 ag
i Mus_musculus.chr8                                      I 84 I 3
s Mus_pahari.LT608297.1                                   58217933 2 +  89631738 ag
i Mus_pahari.LT608297.1                                  I 34 I 3
s Mus_spretus.CM004101.1                                  39498924 2 + 130317789 ag
i Mus_spretus.CM004101.1                                 I 84 I 3
s Muscardinus_avellanarius.MusAve_scaffold_12866             85567 2 -     86153 ag
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Mustela_putorius.JH418006.1                             14356483 2 +  14710649 AG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64440 2 +     67721 gg
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794803 2 +  10118263 ag
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388978 2 +   6019432 ag
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               385006 2 +   4330536 ag
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3791 2 +     18357 ag
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121141 2 +    130748 CC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 13
s Nannospalax_galili.KL204047.1                             948099 2 +   3037898 ag
i Nannospalax_galili.KL204047.1                          I 47 C 0
s Nasalis_larvatus.k141_1350636                              30801 2 +     34575 ag
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233624 2 -   7148211 ag
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129292 2 -    149072 ag
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55092 2 -    132029 ag
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11187 2 -     16345 ag
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17072 2 +     22201 ag
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415293 2 -  22158432 ag
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27470 2 -     54323 ag
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199488 2 +   9404916 ag
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2558238 2 -   3988456 ag
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056530 2 -  11899542 ag
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453285 2 +   2017862 gg
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         438380 2 -    630418 ag
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16264 2 +    150152 ag
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95897 2 -    140218 GG
i Ondatra_zibethicus.OndZib_scaffold_7387                I 37 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6469 2 -     41509 ag
i Onychomys_torridus.OnyTor_scaffold_28377               I 63 C 0
s Orcinus_orca.KB316932.1                                  8104027 2 +  10937097 ag
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1327 2 +     11607 ag
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40534 2 +    559221 ag
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26405975 2 -  44047080 ag
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6494 2 +     17875 ag
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001033.1                                  435 2 +      1169 ag
i Pan_paniscus.AJFE02001033.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1475727 2 - 189151597 ag
i Pan_troglodytes.CM009242.2                             I 34 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   25884 2 -    230217 gg
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463210 2 -  18783137 GG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973869 2 +   8748460 GG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617500 2 +   2937107 ag
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244988 2 - 183742232 ag
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11273 2 +     21308 ag
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294016 2 -  20919399 ag
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23913 2 -     27687 ag
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     592 2 +     10553 ag
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   552 2 -     10386 ag
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16467 2 +     78924 AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3269 2 +      9367 GG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249689 1 +  18517816 a-
i Peromyscus_maniculatus.KI615324.1                      I 63 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5552 2 -     63832 ag
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            4238 2 +     55023 ag
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3705 2 -     89929 ag
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4295 2 +     40849 ag
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  255970 2 +  14605196 ag
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5371 2 +     22231 ag
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2569 2 +     19503 AG
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Pongo_abelii.CM009266.2                                   180846 2 - 189387572 ag
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195586 2 -   9816681 AG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29383 2 +     69807 ag
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46564 2 -     80239 ag
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5584 2 +      7663 ag
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984008 2 +   4620579 AG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567503 2 -   2598838 ag
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5141 2 -      7103 ag
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5738 2 -     11706 ag
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9475 2 -     30655 ag
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35789 2 +     46564 ag
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96068 2 -     98465 ag
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9707 2 +     35169 ag
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39742 2 +     52041 AT
i Psammomys_obesus.NESX01036366.1                        I 57 C 0
s Pteronotus_parnellii.KE847780.1                            53574 2 -     66298 ag
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6062 2 -     18639 ag
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842186 2 -  28871421 ag
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538701 2 -   4952924 ag
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100524 2 +  38429054 GG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28750 2 +     91421 ag
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155302 2 -   7812017 ag
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9607 2 +     72585 ag
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   425 2 -     55207 ag
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37024637 2 -  90668790 ac
i Rattus_norvegicus.chr16                                I 126 I 4
s Rhinolophus_sinicus.LVEH01000134.1                       2916141 2 +   3329780 ag
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3269 2 +      7119 ag
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123884 2 + 195417433 ag
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238111 2 -   7961872 ag
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76686 2 -    116970 ag
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9657 2 +     16473 AG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116993 1 +    313613 -A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                             0 1 +     11297 -G
i Semnopithecus_entellus.k141_583282                     N 0 I 190
s Semnopithecus_hypoleucos.k141_1910531                      30582 2 +     58920 ag
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17080 2 -     45317 ag
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24738 2 -     42441 ag
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27416 2 -     29113 AG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30491 2 -     48123 ag
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51487 2 +     77746 ag
i Sigmodon_hispidus.SigHis_scaffold_20193                I 69 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865530 2 -   1910179 ag
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672605 2 +  18376816 AA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8137 2 -     97271 gg
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126304 2 +    196729 gg
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645343 2 +  69701581 ag
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392558 2 +   1523678 ag
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15714 2 +     22964 ag
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4143 2 +      5583 CC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 13
s Tapirus_indicus.TapInd_scaffold_7432                      193028 2 +    199430 ag
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106996 2 -    539355 ag
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                2066 2 +      9917 ag
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8864 2 +     20590 ag
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354797 2 - 186847797 ag
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21090 2 -     31044 ag
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 13
s Tonatia_saurophila.TonSau_scaffold_294                    481566 2 -    610378 ag
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22547 2 +     26378 ag
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35291 2 -     78344 ag
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21872 2 +     25722 ag
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30247 2 -     62838 ag
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30291 2 +     46913 ag
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11030 2 -     28527 ag
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32182 2 -     64340 ag
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30220 2 -     63452 ag
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11667 2 +     22490 ag
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5090 2 -      6147 ag
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12003 2 -     13050 ag
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257165 2 -   6242583 ag
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3261 2 +     19340 ag
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175276 2 -    200418 ag
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482946 2 -  10818551 ag
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836497 2 -   4065304 ag
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10519 2 -     70247 ag
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367152 2 -  33153633 ag
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4952 2 -     21056 AG
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183505 2 +   5085361 gg
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26661 2 -     30710 ag
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25568 2 -    147434 ag
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77685 2 +   5488506 ag
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106257 2 -    112863 AG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30497 2 -     86975 GG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1328 2 -      1899 AG
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Saimiri_ustus.k141_360372                                  31595 0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16441 0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29040 0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32349 0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       31963 0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110396 0 + 121099817 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              25453 0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     33300 0 -     56120 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Callibella_humilis.k141_1233062                            11532 0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Xerus_inauris.XerIna_scaffold_2302                        175526 0 -    224448 C
e Spermophilus_dauricus.KZ294078.1                         1869771 0 +   3870691 C
e Sapajus_macrocephalus.k141_796559                           9237 0 +     21866 C
e Sapajus_apella.ctg103                                     239647 0 +   5703754 C
e Saguinus_oedipus.k141_1280589                               1803 0 -     22275 C
e Saguinus_mystax.k141_8077960                                5233 0 +      5979 C
e Saguinus_midas.LG03                                       393387 0 - 209938924 C
e Saguinus_labiatus.k141_2380921                              3630 0 -      4390 C
e Saguinus_inustus.k141_2469308                               5285 0 +      5932 C
e Saguinus_imperator.k141_1898058                             5368 0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             5274 0 +      6077 C
e Saguinus_bicolor.k141_2012906                                372 0 -      1130 C
e Plecturocebus_moloch.k141_1031110                          45314 0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          43847 0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      15931 0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          8994 0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          43946 0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          8995 0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44297 0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       43903 0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4499 0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9417 0 +     39866 C
e Pithecia_vanzolinii.k141_1369553                           32999 0 +     51125 C
e Pithecia_pithecia.tarseq_165                              557985 0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33015 0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33255 0 +     63561 C
e Pithecia_hirsuta.k141_640380                               32979 0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7231 0 -     25401 C
e Pithecia_albicans.k141_1239476                             66143 0 +    207309 C
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mico_schneideri.k141_1877700                                     20449 0 -     26561 C
e Mico_humeralifer.k141_1180625                              12130 0 -     12984 C
e Mico_argentatus.k141_582562                                11630 0 +     17804 C
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7502406 0 +  40650429 C
e Leontopithecus_rosalia.k141_1583055                         5040 0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      238 0 +      8855 C
e Leontocebus_nigricollis.k141_3905062                        5085 0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           5262 0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        5508 0 -     13097 C
e Lagothrix_lagothricha.k141_246028                          44601 0 +    110728 C
e Ictidomys_tridecemlineatus.JH393364.1                     388193 0 +   7955117 C
e Chiropotes_sagulatus.k141_1113111                           9326 0 +     34062 C
e Chiropotes_israelita.k141_313004                           43775 0 -    112038 C
e Chiropotes_albinasus.k141_2628359                            372 0 +      1057 C
e Cheracebus_torquatus.k141_890198                           20709 0 +     39636 C
e Cheracebus_regulus.k141_471822                             20920 0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20665 0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10252 0 -     32913 C
e Cebus_unicolor.k141_1654760                                68423 0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9327 0 -     34880 C
e Cebus_albifrons.Contig27                                  374273 0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44505 0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6447 0 -     12580 C
e Callithrix_kuhlii.k119_102356                               3049 0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455526 0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3134 0 -      8861 C
e Callimico_goeldii.k141_1609886                             11048 0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         21874 0 +    119600 C
e Cacajao_hosomi.k141_81245                                  21961 0 +     95584 C
e Cacajao_calvus.k141_89051                                  44435 0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9141 0 +     28062 C
e Ateles_paniscus.k141_866194                                24335 0 -     33135 C
e Ateles_marginatus.k141_970259                              50277 0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              34907 0 +     44353 C
e Ateles_chamek.k141_615173                                   7352 0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12217 0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276050 0 +  21539123 C
e Aotus_vociferans.k141_1514463                               3011 0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3452 0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673458 0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3176 0 -     15923 C
e Aotus_azarae.k141_887050                                    2551 0 +     17741 C
e Alouatta_seniculus.k141_928287                             34294 0 +     42133 C
e Alouatta_puruensis.k141_251022                             10160 0 +     30854 C
e Alouatta_palliata.k141_638677                              47987 0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42338 0 +     45454 C
e Alouatta_macconnelli.k141_1277969                            820 0 -      3959 C
e Alouatta_juara.k141_1687208                                43713 0 -     64179 C
e Alouatta_discolor.k141_2561099                             45263 0 +     55831 C
e Alouatta_caraya.k141_1109140                               45824 0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73585 0 -     84148 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       8392 2 +     36723 AG
s Acomys_cahirinus.AcoCah_scaffold_21377                     27650 2 +     63021 aa
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19897 2 -     61208 ag
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Alouatta_belzebul.k141_1011583                             73585 1 -     84148 -g
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45824 1 -     78289 -g
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45263 1 +     55831 -g
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43713 1 -     64179 -g
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            820 1 -      3959 -g
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42338 1 +     45454 -g
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47987 1 +     70886 -g
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10160 1 +     30854 -g
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34294 1 +     42133 -g
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587110 2 +   2318259 ag
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178532 2 -    412891 ag
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52187 2 -     68529 ag
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2551 1 +     17741 -G
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3176 1 -     15923 -G
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673458 1 +   5030052 -G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3452 1 -     16391 -G
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3011 1 -     17186 -G
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      24910 2 -     32367 AG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6789 2 -     15198 ag
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276050 1 +  21539123 -g
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12217 1 +     48076 -g
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7352 1 -     28759 -g
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34907 1 +     44353 -g
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50277 1 -     71267 -g
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24335 1 -     33135 -g
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7611 2 +     11645 ag
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7619 2 -     19611 ag
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964877 2 -  23207421 gg
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1377 2 -     25979 gg
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88117 2 +    124022 ag
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23646 2 +    288883 ag
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20358036 2 +  48749331 ag
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756600 2 +   1948126 ag
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546742 2 -  45695690 ag
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531750 2 -   4408762 ag
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9141 1 +     28062 -G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44435 1 -     91139 -G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21961 1 +     95584 -G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21874 1 +    119600 -G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11532 1 +     18648 -G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11048 1 -     13885 -g
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3134 1 -      8861 -G
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455526 1 + 189096842 -G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3049 1 +      8664 -G
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632351 2 +  17673402 ag
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666638 2 +   7040546 ag
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210296 2 +   1652518 ag
i Camelus_ferus.KB017975.1                               C 0 C 0
s Capra_aegagrus.CM003241.1                               27410839 2 -  46296322 ag
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26593113 2 +  44709034 ag
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    854 2 -      1607 AT
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272155 2 +    496798 AG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1659 2 +      9923 ag
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29024 2 -     39886 ag
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80947 2 -    217609 tg
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997751 2 +  23392119 ag
i Cavia_aperea.AVPZ01000300.1                            C 0 I 3
s Cavia_porcellus.DS562891.1                               5001193 2 +  23407841 ag
i Cavia_porcellus.DS562891.1                             C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_23560                       64272 2 -     66877 ag
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 3
s Cebuella_niveiventris.k141_592277                           6447 1 -     12580 -G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44505 1 +     53515 -G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374273 1 -  26074798 -g
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9327 1 -     34880 -g
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68423 1 -     89041 -g
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4115 2 -      5494 ag
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493566 2 -  27778364 ag
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20399 2 +     27315 ag
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142631 2 -   4669795 ag
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46370 2 +     47900 ag
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1803 2 -     14410 ag
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46187 2 -    148725 gg
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cheirogaleus_major.k141_666340                             32023 2 -     33796 ag
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6521 2 -     15404 ag
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10252 1 -     32913 -g
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20665 1 -     40346 -g
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20920 1 +    216457 -g
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20709 1 +     39636 -g
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240084 2 -   2543920 cg
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            372 1 +      1057 -g
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43775 1 -    112038 -g
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9326 1 +     34062 -g
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                 63 2 -      4087 AG
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             410849 2 -   2368649 ag
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380733 2 - 200372422 ag
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4290 2 -     84244 ag
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808290 2 +  53390261 AG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4149 2 -      8242 ag
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46219 2 -     83289 AG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117994 2 - 224834208 TG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646760 2 -   1526836 ag
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19921 2 +     50838 AG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5657 2 +     36344 ag
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29446 2 +     75252 ag
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293924 2 +  12879189 ag
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633283 2 -  35494412 ag
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866648 2 -  20541912 ag
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665838 2 -   1390856 ag
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140638 2 -    198055 ag
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100151 2 -    115145 ag
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951930 2 -  37912305 AT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6864 2 -     10735 AT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856876 2 - 111700974 AG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7635 2 +     19438 ag
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241467 2 -    607251 ag
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1227079 2 +  10337057 ag
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33860 2 +    110024 ag
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15796 2 +     18970 ag
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580241 2 +  14770903 ag
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042783 2 -   4378816 aa
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376722 2 +  39960074 aa
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412704 2 -    498745 aa
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72491 2 -    133382 ag
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               204 2 +     25849 ag
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16140 2 -     24895 ag
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43850 2 -     70999 ag
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87820 2 +    112731 ag
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44383 2 +     68309 ag
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54707 2 -     65740 ag
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25340 2 -     75513 ag
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49534 2 -     97555 ag
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6258 2 +     30972 ag
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43978 2 -     52037 ag
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60381 2 -    111500 ag
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923301 2 -   3816255 ag
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2517 2 -     28519 ag
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93184 2 -     95226 ag
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2665 2 -      6791 ag
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3586045                              19271 2 -     19819 AG
i Gorilla_beringei.k141_3586045                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                257692 2 - 186649187 ag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3730 2 -     78134 ag
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16065 2 -     40692 ag
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37464 2 +     49394 ag
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62335 2 -     66874 ag
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11206 2 -     42923 ag
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18208 2 -     53142 ag
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10850 2 +     48891 ag
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933723 2 -  22651954 ag
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1595 2 +      8654 ag
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8993 2 -     36432 ag
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552991 2 -   1711038 ag
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2428 2 -      2730 ag
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144163 2 -    630532 ag
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73142 2 +    143317 ag
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 3
s Hylobates_agilis.k141_1155965                               7204 2 +     12352 ag
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14388 2 +     55766 ag
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053988 2 + 191637585 ag
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802866 2 +  11177569 ag
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8477 2 -    135385 ag
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Indri_indri.k141_2415743                                    3754 1 +     11955 -g
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11386 2 -     16823 ag
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241382 2 +   9596543 ag
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73224 2 -     97402 ag
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44601 1 +    110728 -g
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64539 2 -     65777 ag
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760862 2 +  30322482 ag
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5508 1 -     13097 -g
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5262 1 +      5940 -g
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5085 1 -      5717 -G
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      238 1 +      8855 -G
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5040 1 -     13645 -G
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10378 2 +     29618 ag
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10374 2 +     31569 ag
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10384 2 +     24756 ag
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10384 2 +     16388 ag
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342571 2 +    662738 ag
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335513 2 -   1826925 ag
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086261 2 +  43346337 ag
i Loxodonta_africana.GL010049.1                          I 2 C 0
s Macaca_arctoides.k141_1757516                              46905 2 -     61512 ag
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374567 2 -  60120075 ag
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26835 2 +     30207 ag
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1673 2 -      5035 ag
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26788 2 +     30527 ag
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37964 2 -     50087 ag
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47708 2 +     51645 ag
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416911 2 - 187317192 ag
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401141 2 +  25927173 ag
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50313 2 -     62418 ag
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2844 2 +     14901 ag
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46785 2 +     59329 ag
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272693 2 +    668171 ag
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1325 2 -      5049 ag
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4491 2 +     17132 ag
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224618 2 -    270270 ag
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323981 2 +  24302211 ag
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358812 2 -    752769 ag
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674900 2 -    737560 ac
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222200 2 +    317179 ac
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52221 2 -    140813 AA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88855 2 +     93471 ag
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11630 1 +     17804 -G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12130 1 -     12984 -G
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20449 1 -     26561 -G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986216 2 +  93316391 ag
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48058 2 +    145209 ag
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186438 2 +    200668 ag
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965280 2 +  27267610 TG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364586 2 -   8254450 ag
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43506 2 -     48117 ag
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Mirza_zaza.k141_766280                                     53991 2 -     62432 ag
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360960 2 +    437263 AG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180683 2 +    366855 ag
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27295 2 -     82753 ag
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42543 2 +     47283 ag
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596471 2 + 120012414 aa
i Mus_caroli.LT608237.1                                  I 3 C 0
s Mus_musculus.chr8                                       41689645 2 + 129401213 aa
i Mus_musculus.chr8                                      I 3 C 0
s Mus_pahari.LT608297.1                                   58217938 2 +  89631738 aa
i Mus_pahari.LT608297.1                                  I 3 C 0
s Mus_spretus.CM004101.1                                  39498929 2 + 130317789 aa
i Mus_spretus.CM004101.1                                 I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85569 2 -     86153 ag
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64442 2 +     67721 ag
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794805 2 +  10118263 ag
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388980 2 +   6019432 ag
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               385008 2 +   4330536 ag
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3793 2 +     18357 ag
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             948101 2 +   3037898 ag
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30803 2 +     34575 ag
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233626 2 -   7148211 ag
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129294 2 -    149072 ag
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55094 2 -    132029 ag
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11189 2 -     16345 ag
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17074 2 +     22201 ag
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415295 2 -  22158432 ag
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27472 2 -     54323 ag
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Ochotona_princeps.JH802162.1                             2558240 2 -   3988456 aa
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056532 2 -  11899542 ag
i Octodon_degus.JH651603.1                               C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         438382 2 -    630418 ag
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16266 2 +    150152 ag
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95899 2 -    140218 AG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6471 2 -     41509 ag
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8104029 2 +  10937097 ag
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1329 2 +     11607 ag
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Ovis_aries.CM001607.2                                   26405977 2 -  44047080 ag
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6496 2 +     17875 ag
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001033.1                                  437 2 +      1169 ag
i Pan_paniscus.AJFE02001033.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1475729 2 - 189151597 ag
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617502 2 +   2937107 ag
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244990 2 - 183742232 ag
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11275 2 +     21308 ag
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294018 2 -  20919399 ag
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23915 2 -     27687 ag
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     594 2 +     10553 ag
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   554 2 -     10386 ag
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3271 2 +      9367 AC
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249690 1 +  18517816 -g
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5554 2 -     63832 ag
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            4240 2 +     55023 ag
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3707 2 -     89929 ag
i Piliocolobus_gordonorum.k141_381342                    C 0 I 55
s Piliocolobus_kirkii.k141_1310104                            4297 2 +     40849 ag
i Piliocolobus_kirkii.k141_1310104                       C 0 I 55
s Piliocolobus_tephrosceles.PDMG02000141.1                  255972 2 +  14605196 ag
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 55
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5373 2 +     22231 ag
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66143 1 +    207309 -g
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7231 1 -     25401 -g
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32979 1 +     58159 -g
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33255 1 +     63561 -g
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33015 1 +     51148 -g
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557985 1 -   4542175 -g
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           32999 1 +     51125 -g
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2571 2 +     19503 AG
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9417 1 +     39866 -g
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4499 1 -      9282 -G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43903 1 -     87950 -G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44297 1 -     88961 -g
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8995 1 -     39403 -G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43946 1 +     87928 -G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8994 1 -     60166 -g
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15931 1 -     67232 -g
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43847 1 -     90634 -g
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45314 1 +     89403 -g
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   180848 2 - 189387572 ag
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195588 2 -   9816681 AG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29385 2 +     69807 ag
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46566 2 -     80239 ag
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5586 2 +      7663 ag
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984010 2 +   4620579 AG
i Prolemur_simus.MPIZ01000396.1                          C 0 I 10
s Propithecus_coquerelli.NW_012148875.1                    1567505 2 -   2598838 ag
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5143 2 -      7103 ag
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5740 2 -     11706 ag
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9477 2 -     30655 ag
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35791 2 +     46564 ag
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96070 2 -     98465 ag
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9709 2 +     35169 ag
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39744 2 +     52041 AA
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53576 2 -     66298 ag
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteropus_alecto.KB030862.1                               5842188 2 -  28871421 ag
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538703 2 -   4952924 ag
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28752 2 +     91421 ag
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155304 2 -   7812017 ag
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9609 2 +     72585 ag
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   427 2 -     55207 ag
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37024643 2 -  90668790 AA
i Rattus_norvegicus.chr16                                I 4 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916143 2 +   3329780 ga
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3271 2 +      7119 ag
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123886 2 + 195417433 ag
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238113 2 -   7961872 ag
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76688 2 -    116970 ag
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                372 1 -      1130 -g
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5274 1 +      6077 -G
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5368 1 +      5971 -g
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5285 1 +      5932 -g
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3630 1 -      4390 -g
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393387 1 - 209938924 -g
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5233 1 +      5979 -g
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1803 1 -     22275 -G
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9659 2 +     16473 AG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110396 1 + 121099817 -G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31963 1 -     47369 -g
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32349 1 -     79414 -g
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29040 1 -     34454 -g
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16441 1 -     22428 -g
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31595 1 -     47109 -g
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239647 1 +   5703754 -g
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9237 1 +     21866 -g
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116994 2 +    313613 AA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                           191 2 +     11297 GG
i Semnopithecus_entellus.k141_583282                     I 190 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30584 2 +     58920 ag
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17082 2 -     45317 ag
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24740 2 -     42441 ag
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27418 2 -     29113 AG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30493 2 -     48123 ag
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51489 2 +     77746 ag
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865532 2 -   1910179 aa
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672607 2 +  18376816 AG
i Sorex_araneus.JH798187.1                               C 0 C 0
s Sus_scrofa.CM000828.4                                    6645345 2 +  69701581 aa
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392560 2 +   1523678 ag
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15716 2 +     22964 ag
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      193030 2 +    199430 ag
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    106998 2 -    539355 ag
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                2068 2 +      9917 ag
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8866 2 +     20590 ag
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354799 2 - 186847797 ag
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481568 2 -    610378 ag
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22549 2 +     26378 ag
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35293 2 -     78344 ag
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21874 2 +     25722 ag
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30249 2 -     62838 ag
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30293 2 +     46913 ag
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11032 2 -     28527 ag
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32184 2 -     64340 ag
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30222 2 -     63452 ag
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11669 2 +     22490 ag
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5092 2 -      6147 ag
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12005 2 -     13050 ag
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257167 2 -   6242583 ag
i Trachypithecus_phayrei.ctg124                          C 0 I 9
s Trachypithecus_pileatus.k141_2622778                        3263 2 +     19340 ag
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175278 2 -    200418 ta
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482948 2 -  10818551 ag
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836499 2 -   4065304 ag
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10521 2 -     70247 ag
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367154 2 -  33153633 ag
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4954 2 -     21056 AA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Varecia_rubra.k141_787544                                  26663 2 -     30710 ag
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25570 2 -    147434 ag
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77687 2 +   5488506 ag
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1330 2 -      1899 AG
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Erinaceus_europaeus.JH835339.1                           3667488 0 +   7059049 C
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              25453 0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     33300 0 -     56120 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609 0 +     14636 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Allochrocebus_solatus.k141_3554717                         19818 0 +     32033 C
e Allochrocebus_preussi.k141_1993939                         18133 0 -     21945 C
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30499 0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                106259 0 -    112863 C
e Ursus_maritimus.KK499267.1                                183507 0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              8139 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6064 0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        40536 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1453287 0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                199490 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356485 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046         9869 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             27586 0 -     74585 C
e Lycaon_pictus.CM007581.1                                41615894 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        814858 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24917467 0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45108320 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41616739 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          223604 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10261 0 -     23171 C
e CanFam4.chr16                                           42506625 0 +  60362399 C
e Ailurus_fulgens.LNAC01001112.1                            217055 0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416935 0 +  29979442 C
e Xerus_inauris.XerIna_scaffold_2302                        175526 0 -    224448 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Suricata_suricatta.SurSur_flattened_line_6629             126306 0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1869771 0 +   3870691 C
e Puma_concolor.QAVW01001104.1                            18100526 0 +  38429054 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16469 0 +     78924 C
e Panthera_tigris.KE722367.1                               3973871 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18463212 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   25886 0 -    230217 C
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Mungos_mungo.MunMun_flattened_line_18455                   19889 0 -     63510 C
e Miopithecus_ogouensis.k141_1534655                         24081 0 -     27822 C
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7502406 0 +  40650429 C
e Ictidomys_tridecemlineatus.JH393364.1                     388193 0 +   7955117 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71521 0 +     83186 C
e Helogale_parvula.HelPar_flattened_line_2585                32155 0 -    327341 C
e Felis_nigripes.FelNig_flattened_line_31944                 29063 0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185117963 0 - 205367284 C
e Erythrocebus_patas.Contig38                               264582 0 +  21539334 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5722 0 +     87169 C
e Chlorocebus_sabaeus.CM001947.1                            306444 0 - 135778131 C
e Chlorocebus_pygerythrus.k141_3063162                       11592 0 -     44032 C
e Chlorocebus_aethiops.ctg25                                345053 0 +  18827391 C
e Cercopithecus_roloway.k141_3012935                         24152 0 +     36323 C
e Cercopithecus_pogonias.k141_6079                           27191 0 +     70610 C
e Cercopithecus_petaurista.k141_42573                         4793 0 +      8499 C
e Cercopithecus_nictitans.k141_2995370                       28630 0 -     32606 C
e Cercopithecus_neglectus.k141_858615                        33729 0 -     45857 C
e Cercopithecus_mona.ctg39                                  271364 0 +  21565898 C
e Cercopithecus_albogularis.ctg5                                  365637 0 -  39242232 C
e Cercopithecus_lowei.k141_2101310                           13050 0 -     25376 C
e Cercopithecus_hamlyni.k141_566925                          29270 0 -     34525 C
e Cercopithecus_diana.k141_132293                            13538 0 -     17524 C
e Cercopithecus_cephus.k141_4183004                           8424 0 +     20796 C
e Cercopithecus_ascanius.k141_3120866                        28465 0 -     40656 C
e Allochrocebus_lhoesti.k141_3412094                          1578 0 +     13857 C
e Allenopithecus_nigroviridis.k141_3755588                   49551 0 +     53615 C
e Acinonyx_jubatus.LLWD01001279.1                           814267 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       8394  9 +     36723 G------T--------AA-T-TCTC
s Acinonyx_jubatus.LLWD01001279.1                           814267 12 +   1699592 G------G-----GTGGA-T-TTTC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27652 18 +     63021 TGTGTGAG-----TTAAA-T-TCTT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416935 12 +  29979442 g------gg--t---gaa-t-ttcc
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            217055 12 +    347723 g------gg--t---gaa-t-ttcc
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19899 12 -     61208 t------g--at---aaa-t-tccc
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49551  9 +     53615 G------T--------AA-T-TCCC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1578  9 +     13857 G------T--------AA-T-TCCC
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18133  9 -     21945 G------T--------AA-T-TCCC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19818  9 +     32033 G------T--------AA-T-TCCC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73586  9 -     84148 G------T--------AA-T-TCCC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45825  9 -     78289 g------t--------AA-T-TCCC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45264  9 +     55831 G------T--------AA-T-TCCC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43714  9 -     64179 g------T--------AA-T-TCCC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            821  9 -      3959 g------t--------AA-T-TCCC
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42339  9 +     45454 G------T--------AA-T-TCTC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47988  9 +     70886 g------t--------AA-T-TCCC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10161  9 +     30854 G------T--------AA-T-TCTC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34295  9 +     42133 G------T--------AA-T-TCTC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587112 12 +   2318259 g------gg--t---aaa-t-ttcc
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      178534  2 -    412891 a------g-----------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_21030             52189 12 -     68529 g------gg--t---aaa-t-ttgc
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    2552  9 +     17741 G------T--------AA-T-TCCC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3177  9 -     15923 G------T--------AA-T-TCCC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673459  9 +   5030052 G------T--------AA-T-TCCC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3453  9 -     16391 G------T--------AA-T-TCCC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3012  9 -     17186 G------T--------AA-T-TCCC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      24912 12 -     32367 A------G-----GTAAA-T-TCCC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6791 12 -     15198 a------gg--t---aca-t-ttcc
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276051  9 +  21539123 g------t--------AA-T-TCCC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12218  9 +     48076 g------t--------AA-T-TCCC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7353  9 -     28759 g------t--------AA-T-TCCC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34908  9 +     44353 g------t--------AA-T-TCCC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50278  9 -     71267 g------t--------AA-T-TCCC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24336  9 -     33135 g------t--------AA-T-TCCC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7613 10 +     11645 a------t--------aaat-tctc
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7621 10 -     19611 a------t--------aaaT-TCTC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964879 12 -  23207421 g------gg--t---aaa-t-ttcc
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1379 12 -     25979 g------gg--t---aaa-t-ttcc
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88119 12 +    124022 g------gg--t---aaa-t-ttcc
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23648 12 +    288883 g------gg--t---aaa-t-ttcc
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20358038 12 +  48749331 g------gg--t---aaa-t-ttcc
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756602 12 +   1948126 g------gg--t---aaa-t-ttcc
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546744 12 -  45695690 g------gg--t---aaa-t-ttcc
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531752 12 -   4408762 g------gg--t---aaa-t-ttcc
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9142  9 +     28062 G------T--------AA-T-TTCC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44436  9 -     91139 G------T--------AA-T-TTCC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21962  9 +     95584 G------T--------AA-T-TTCC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21875  9 +    119600 G------T--------AA-T-TTCC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11533  9 +     18648 G------T--------AA-T-TCCC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11049  9 -     13885 g------T--------AA-T-TCCC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3135  9 -      8861 G------T--------AA-T-TCCC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455527  9 + 189096842 G------T--------AA-T-TCCC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3050  9 +      8664 G------T--------AA-T-TCCC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632353 12 +  17673402 g------ggca-----aa-t-gtcc
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666640 12 +   7040546 g------ggca-----aa-t-gtcc
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210298 12 +   1652518 g------ggca-----aa-t-gtcc
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506625 12 +  60362399 g------gg--t---ACA-T-TTTC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10261 12 -     23171 G------G-----GTACA-T-TTTC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223604 12 +   9314153 g------gg--t---ACA-T-TTTC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616739 12 +  59632846 g------gg--t---aca-t-tttc
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108320 12 -  63665305 g------gg--t---ACA-T-TTTC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410841 12 -  46296322 g------ggca-----aa-t-ttcc
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26593115 12 +  44709034 g------gg--t---aaa-t-ttcc
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    856 12 -      1607 A------G-----GTAGA-T-TTCC
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272157 12 +    496798 AGT-T--T--------AT-T-TCTC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1661 12 +      9923 a------gg--t---aca-c-ttcc
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29026 12 -     39886 a------ggga-----aa-t-tctc
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80949 14 -    217609 g------g--at-aaaaa-c-ttcc
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997756  5 +  23392119 -------------------t-tTCC
i Cavia_aperea.AVPZ01000300.1                            I 3 C 0
s Cavia_porcellus.DS562891.1                               5001198  5 +  23407841 -------------------t-tTCC
i Cavia_porcellus.DS562891.1                             I 3 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64277  5 -     66877 -------------------t-tTCC
i Cavia_tschudii.CavTsc_scaffold_23560                   I 3 C 0
s Cebuella_niveiventris.k141_592277                           6448  9 -     12580 G------T--------AA-T-TCCC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44506  9 +     53515 G------T--------AA-T-TCCC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374274  9 -  26074798 g------t--------AA-T-TGCC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9328  9 -     34880 g------t--------AA-T-TGCC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68424  9 -     89041 g------t--------AA-T-TGCC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4117 12 -      5494 a---gttt--------at-t-tctc
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493568 12 -  27778364 g------g--at---aca-t-tttc
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20401 12 +     27315 g------g--at---aca-t-tttc
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                142633  9 -   4669795 a------t--------aA-T-TCCC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46372  9 +     47900 a------T--------AA-T-TCCC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1805  9 -     14410 a------T--------AA-T-TCCC
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46189  9 -    148725 a------T--------AA-T-TCCC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28465  9 -     40656 G------T--------AA-T-TCCC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8424  9 +     20796 G------T--------AA-T-TCCC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13538  9 -     17524 G------T--------AA-T-TCCC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29270  9 -     34525 G------T--------AA-T-TCCC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13050  9 -     25376 G------T--------AA-T-TCCC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365637  9 -  39242232 g------t--------AA-T-TCCC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271364  9 +  21565898 g------t--------AA-T-TCCC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33729  9 -     45857 g------t--------AA-T-TCCC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28630  9 -     32606 G------T--------AA-T-TCCC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4793  9 +      8499 G------T--------AA-T-TCCC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27191  9 +     70610 g------t--------AA-T-TCCC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24152  9 +     36323 G------T--------AA-T-TCCC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32025 10 -     33796 a------t--------gaaT-TCTC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6523 10 -     15404 a------t--------gaat-tctc
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10253  9 -     32913 g------t--------AA-T-TTCC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20666  9 -     40346 g------t--------AA-T-TTCC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20921  9 +    216457 g------t--------AA-T-TTCC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20710  9 +     39636 g------t--------AA-T-TTCC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240086 12 -   2543920 a------gg--t---aaa-T-TTCC
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            373  9 +      1057 C------T--------AA-T-TCCC
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43776  9 -    112038 g------g--------AA-T-TTCC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9327  9 +     34062 g------t--------AA-T-TTCC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345053  9 +  18827391 g------t--------AA-T-TCCC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11592  9 -     44032 g------t--------AA-T-TCCC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306444  9 - 135778131 G------T--------AA-T-TCCC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                 65 11 -      4087 A------G-----GTAAA-C-TCA-
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             410851  9 -   2368649 g------T--------AA-T-TCCC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380735  9 - 200372422 g------t--------AA-T-TCCC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4292  9 -     84244 g------t--------AA-T-TCCC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808292 12 +  53390261 A------G--Gt---aaa-t-tttt
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4151 12 -      8242 g------g--at---cac-t-ttcc
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46221 18 -     83289 TACGTGAG-----GTAAA-T-TCTC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213117996 18 - 224834208 TGTGTGAG----TTAA-A-T-TCTC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5722 12 +     87169 g------gg--t---gaa-t-ttca
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646762 12 -   1526836 a------ggca-----ag-t-tcct
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19923 12 +     50838 A------G-----GTAGA-T-TTTC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5659 12 +     36344 a------ag--t---aag-t-TTCC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29448 12 +     75252 a------ag--t---aaa-t-ttcc
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293926 10 +  12879189 a------t--------aaaT-TCCC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633285 12 -  35494412 g------gg--t---aaa-t-ttcc
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866650 12 -  20541912 a------g--at---aca-t-ttcc
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665840 12 -   1390856 g------g--at---aca-t-tttc
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140640 12 -    198055 g------g--at---aca-t-tttc
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100153 12 -    115145 a------gg--t---aaa-T-TTCC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951932 11 -  37912305 T------T------CCTC-T-TCTC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6866 11 -     10735 T------T------CCTC-T-TCTC
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856878 12 - 111700974 A------G-----GAGAA-C-TCCC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7637 13 +     19438 g-----ggg--t---aaa-t-atcc
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241469 12 -    607251 t------gg--t---aaa-t-ttcc
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1227081 12 +  10337057 a------gg-a----aaa-c-ctcc
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33862 18 +    110024 gttgtgag---tt-ca-a-t-tcTC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15798 18 +     18970 GGTGTGAG----TTAA-A-T-TCTC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917467 12 +  41312741 g------g--at---gaa-t-ttcc
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580243 12 +  14770903 a------gg--t---aaa-t-ttcc
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042785 12 -   4378816 g------gg--t---aca-t-tttc
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376724 12 +  39960074 g------gg--t---aca-t-tttc
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412706 12 -    498745 g------gg--t---aca-t-tttc
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667488  6 +   7059049 -----------------A-T-TTCC
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               264582  9 +  21539334 G------T--------AA-T-TCCC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72493 12 -    133382 g------gg--t---aaa-t-ttcc
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               206 12 +     25849 c------ag--t---aaa-T-TTCC
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16142 10 -     24895 a------t--------aaat-tctc
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43852 10 -     70999 a------t--------aaat-tctc
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87822 10 +    112731 a------g--------aaat-tctc
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44385 10 +     68309 a------t--------aaat-tctc
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54709 10 -     65740 a------t--------aaat-tctc
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25342 10 -     75513 a------t--------aaat-tctc
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49536 10 -     97555 a------t--------aaat-tctc
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6260 10 +     30972 a------t--------aaat-tctc
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43980 10 -     52037 a------g--------aaat-tctc
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60383 10 -    111500 a------t--------aaat-tctc
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248177 12 - 206538554 G------G-----GTGGA-T-TTTC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185117963 12 - 205367284 G------G-----GTGGA-T-TTTC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 29063 12 -     30238 G------G-----GTGGA-T-TTTC
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923303 12 -   3816255 a------gg--t---aaa-t-ttcc
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2519 12 -     28519 a------ag--t---aaa-t-tccc
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93186 12 -     95226 g------gg--t---aaa-t-ctcc
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2667 12 -      6791 a------gg--t---gaa-t-tcac
i Glis_glis.GliGli_scaffold_163929                       C 0 I 2
s Gorilla_beringei.k141_3586045                              19273  9 -     19819 G------T--------AA-T-TCTC
i Gorilla_beringei.k141_3586045                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                257694  9 - 186649187 g------t--------aa-t-tctc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3732 12 -     78134 a------gg--t---gag-t-tccc
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 2
s Hapalemur_alaotrensis.k141_330369                          16067 10 -     40692 a------t--------aaat-tctc
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37466 10 +     49394 a------t--------aaat-tctc
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62337 10 -     66874 a------t--------aaat-tctc
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11208 10 -     42923 a------t--------aaat-tctc
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18210 10 -     53142 a------t--------aaat-tctc
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32155 12 -    327341 g------gg--t---gaa-t-ttca
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10852 12 +     48891 g------gg--t---aaa-t-ttcc
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933725 12 -  22651954 a------gg--t---aaa-T-TTCC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1597 12 +      8654 a------gg--t---aga-t-gccc
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                8995 12 -     36432 g------g---tt--aaa-t-ttcc
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1552993 12 -   1711038 g------gg--t---aaa-t-ttcc
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_164997               2430 12 -      2730 g------gg--t---aac-t-ttcc
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144165  9 -    630532 g------t--------AA-T-TCTC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71521 12 +     83186 g------gg--t---gaa-t-ttcc
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73147  5 +    143317 -------------------t-tTCC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3 C 0
s Hylobates_agilis.k141_1155965                               7206  9 +     12352 g------t--------AA-C-TCTC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14390  9 +     55766 g------t--------AA-C-TCTC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053990  9 + 191637585 g------t--------AA-T-TCTC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802868  9 +  11177569 g------t--------AA-T-TCTC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8479 12 -    135385 a------gg--t---ATA-T-TCCC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388193 12 +   7955117 a------gg--t---aAA-T-TCTC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3755 10 +     11955 a------t--------aaat-tctc
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11388 12 -     16823 g------gg--t---aaa-T-TTCC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241384 12 +   9596543 t------g--at---aaa-t-tccc
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73226 12 -     97402 g------gg--t---aaa-t-ttcc
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44602  9 +    110728 g------t--------AA-T-TCCC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64541 12 -     65777 a------gg--t---gaa-t-ttcc
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14760864 10 +  30322482 a------t--------aaat-tctc
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5509  9 -     13097 C------T--------AA-T-TCCC
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5263  9 +      5940 C------T--------AA-T-TCCC
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5086  9 -      5717 C------T--------AA-T-TCCC
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      239  9 +      8855 G------T--------AA-T-TCCC
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5041  9 -     13645 G------T--------AA-T-TCCC
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10380 10 +     29618 a------t--------aaat-tctc
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10376 10 +     31569 a------t--------aaat-tctc
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10386 10 +     24756 a------t--------aaat-tctc
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10386 10 +     16388 a------t--------aaat-tctc
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814858 12 -   3914936 g------gg--t---g-aat-ttcc
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342573 12 +    662738 g------gg--t---aaa-t-ttcc
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335515  9 -   1826925 g------t--------AA-T-TCCC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086263 12 +  43346337 a------gg--t---aCA-T-GCCC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41615894 12 +  59628241 g------gg--t---aca-t-tttc
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              46907  9 -     61512 g------t--------AA-T-TCCC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374569  9 -  60120075 g------t--------AA-T-TCCC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26837  9 +     30207 g------t--------AA-T-TCCC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1675  9 -      5035 g------t--------AA-T-TCCC
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26790  9 +     30527 g------t--------AA-T-TCCC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37966  9 -     50087 g------g--------AA-T-TCCC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47710  9 +     51645 g------g--------AA-T-TCCC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416913  9 - 187317192 g------t--------AA-T-TCCC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401143  9 +  25927173 g------g--------aA-T-TCCC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50315  9 -     62418 g------g--------AA-T-TCCC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2846  9 +     14901 g------t--------AA-T-TCCC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46787  9 +     59329 g------g--------AA-T-TCCC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272695  9 +    668171 g------g--------AA-T-TCCC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1327  9 -      5049 g------t--------AA-T-TCCC
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4493  9 +     17132 g------g--------AA-T-TCCC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224620 12 -    270270 g------gg--t---AGA-T-TTCC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        323983  9 +  24302211 a------T--------AA-T-TCCC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358814  9 -    752769 a------T--------AA-T-TCCC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674902 12 -    737560 g------gg--t---aag-t-atcc
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222202 12 +    317179 g------gg--t---aag-t-atcc
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502406 12 +  40650429 a------gg--t---aAA-T-TCTC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27586 12 -     74585 g------gg--t---gaa-T-TTCC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52223 16 -    140813 TG-CT-AA-----TTAAA-T-TCTT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88857 12 +     93471 g------gg--t---aaa-t-ttcc
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                11631  9 +     17804 G------T--------AA-T-TCCC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12131  9 -     12984 G------T--------AA-T-TCCC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20450  9 -     26561 G------T--------AA-T-TCCC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986218 10 +  93316391 a------t--------gaat-TCTC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48060 12 +    145209 a------gg--t---gaa-C-TCTC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186440 12 +    200668 a------gg--t---aaa-t-ttcc
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965282 18 +  27267610 GGTGTGAG----TTAA-A-T-TCTC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364588 12 -   8254450 a------gg--t---aaa-t-ttcc
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43508 12 -     48117 a------gg--t---aaa-T-TTCC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24081  9 -     27822 G------T--------AA-T-TCCC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9869 12 +     27589 G------G-----GTG-AAT-TTCC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     53993 10 -     62432 a------t--------gaat-tctc
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360962 12 +    437263 G------G-----GTAAA-T-TTCC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180685 12 +    366855 a------gg--t---gag-t-ctcc
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27297 12 -     82753 g------g--ct---aaa-t-ttcc
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19889 12 -     63510 g------g-----GTGAA-T-TTCA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42545 12 +     47283 g------gg--t---aaa-t-ttcc
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596473 12 + 120012414 tgtgtcaG-----TTAA--------
i Mus_caroli.LT608237.1                                  C 0 I 7
s Mus_musculus.chr8                                       41689647 12 + 129401213 tgtgtcAG-----TTAA--------
i Mus_musculus.chr8                                      C 0 I 7
s Mus_pahari.LT608297.1                                   58217940 18 +  89631738 tgtgtcaG------CATT-CATTTC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498931 12 + 130317789 tgtgtcAG-----TTAA--------
i Mus_spretus.CM004101.1                                 C 0 I 7
s Muscardinus_avellanarius.MusAve_scaffold_12866             85571 11 -     86153 a------gg--t---gaa-T-TC-C
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 3
s Mustela_putorius.JH418006.1                             14356485 12 +  14710649 G------G-----ATGGA-T-TTCT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64444 12 +     67721 a------gg--t---AGA-T-TTCC
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794807 12 +  10118263 a------gg--t---aaa-t-ttcc
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4388982 12 +   6019432 a------gg--t---aaa-t-ttcc
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               385010 12 +   4330536 a------gg--t---aaa-t-ttcc
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3795 12 +     18357 a------gg--t---aaa-T-TTCC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             948103 23 +   3037898 agagagagggattttGAA-T-TCCG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30805  9 +     34575 g------t--------AA-T-TCCC
i Nasalis_larvatus.k141_1350636                          C 0 I 55
s Neophocaena_asiaeorientalis.KZ687982.1                   1233628 12 -   7148211 g------gg--t---aaa-t-ttcc
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129296 12 -    149072 a------gg--t---aaa-c-ttcc
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55096  9 -    132029 g------t--------AA-T-TCTC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11191  9 -     16345 g------t--------AA-T-TCTC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17076  9 +     22201 g------t--------AA-T-TCTC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415297  9 -  22158432 g------t--------AA-T-TCTC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27474  9 -     54323 g------t--------AA-T-TCTC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199490 12 +   9404916 g------gg--t---gca-t-tttc
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Ochotona_princeps.JH802162.1                             2558242 13 -   3988456 a------agca----aaa-t-tccc
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056534 12 -  11899542 a------gg--t---AGA-T-TTCC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453287 11 +   2017862 g------gg--t---g-a-t-ttcc
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         438384 12 -    630418 t------gg--t---aaa-t-ttcc
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16268 11 +    150152 g------gg--t---a-a-t-ttcc
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95901 18 -    140218 GGTGTGAG----TTAA-A-T-TCTC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6473 17 -     41509 tgtgggag--ct---a-a-T-TCTC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8104031 12 +  10937097 g------g-----GTAAA-T-TTCC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1331 12 +     11607 a------ag--t---aaa-T-TCTG
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40536 12 +    559221 g------gg-----cgca-t-tttc
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26405979 12 -  44047080 g------gg--t---aaa-t-ttcc
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6498 12 +     17875 g------gg--t---aaa-t-ttcc
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001033.1                                  439  9 +      1169 g------t--------AA-T-TCTC
i Pan_paniscus.AJFE02001033.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1475731  9 - 189151597 g------t--------aA-T-TCTC
i Pan_troglodytes.CM009242.2                             C 0 I 19
s Panthera_onca.PanOnc_flattened_line_3271                   25886 12 -    230217 g------gg--t---gga-t-tttc
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463212 12 -  18783137 G------G-----GTGGA-T-TTTC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3973871 12 +   8748460 G------G-----GTGGA-T-TTTC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617504 12 +   2937107 g------gg--t---aaa-t-ttcc
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   244992  9 - 183742232 g------t--------AA-T-TCCC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11277  9 +     21308 g------t--------AA-T-TCCC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294020  9 -  20919399 g------t--------AA-T-TCCC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23917  9 -     27687 g------t--------AA-T-TCCC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     596  9 +     10553 g------t--------AA-T-TCCC
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   556  9 -     10386 g------t--------AA-T-TCCC
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16469 12 +     78924 G------C-----ATGAA-T-TTCC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3273 12 +      9367 T------T-----CCCTC-T-TCTC
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249691 17 +  18517816 TGTGTGAG-----TTA-A-T-TCTC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33300 12 -     56120 a------g-----TTAAA-T-TTCC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 10
s Phocoena_phocoena.PhoPho_flattened_line_24159               5556 12 -     63832 g------gg--t---aaa-t-ttcc
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            4242  9 +     55023 g------t--------AA-T-TCCC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3764  9 -     89929 G------T--------AA-T-TCCC
i Piliocolobus_gordonorum.k141_381342                    I 55 C 0
s Piliocolobus_kirkii.k141_1310104                            4354  9 +     40849 G------T--------AA-T-TCCC
i Piliocolobus_kirkii.k141_1310104                       I 55 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256029  9 +  14605196 G------T--------AA-T-TCCC
i Piliocolobus_tephrosceles.PDMG02000141.1               I 55 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5375 12 +     22231 a------gg--t---aaa-T-TTCC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66144  9 +    207309 g------t--------AA-T-TTCC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7232  9 -     25401 g------t--------AA-T-TTCC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32980  9 +     58159 g------t--------AA-T-TTCC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33256  9 +     63561 g------t--------AA-T-TTCC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33016  9 +     51148 g------t--------AA-T-TTCC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557986  9 -   4542175 g------t--------AA-T-TTCC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33000  9 +     51125 g------t--------AA-T-TTCC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2573 12 +     19503 G------G-----GTAAA-T-TTCC
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9418  9 +     39866 a------T--------AA-T-TTCC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4500  9 -      9282 A------T--------AA-T-TTCC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43904  9 -     87950 A------T--------AA-T-TTCC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44298  9 -     88961 a------T--------AA-T-TTCC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          8996  9 -     39403 A------T--------AA-T-TTCC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43947  9 +     87928 A------T--------AA-T-TTCC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          8995  9 -     60166 a------T--------AA-T-TTCC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15932  9 -     67232 a------T--------AA-T-TTCC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43848  9 -     90634 a------T--------AA-T-TTCC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45315  9 +     89403 a------T--------AA-T-TTCC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   180850  9 - 189387572 g------t--------AA-T-TCTC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195590  9 -   9816681 G------T--------AA-T-TCTC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29387  9 +     69807 g------t--------AA-T-TCCC
i Presbytis_comata.k141_1230337                          C 0 I 55
s Presbytis_mitrata.k141_584736                              46568  9 -     80239 g------t--------AA-T-TCCC
i Presbytis_mitrata.k141_584736                          C 0 I 55
s Procavia_capensis.ProCapCap_scaffold_165387                 5588 12 +      7663 a------gg--t---aca-t-gccc
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01035205.1                                186 10 -       431 A------T--------AAAT-TCTC
i Prolemur_simus.MPIZ01035205.1                          n 10 n 10
s Propithecus_coquerelli.NW_012148875.1                    1567507 10 -   2598838 a------t--------aaaT-TCTC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5145 10 -      7103 a------t--------aaaT-TCTC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5742 10 -     11706 a------t--------aaat-tctc
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9479 10 -     30655 a------t--------aaat-tctc
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35793 10 +     46564 a------t--------aaat-tctc
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96072 10 -     98465 a------t--------aaat-tctc
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9711 10 +     35169 a------t--------aaaT-TCTC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39746 16 +     52041 TG-CT-AG-----TTAAA-T-TCTT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53578 12 -     66298 a------gg--t---aag-t-ttcc
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6064 12 -     18639 g------g--at---gaa-t-ttcc
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842190 12 -  28871421 g------gg--t---aaa-t-ttcc
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538705 12 -   4952924 g------gg--t---aaa-t-ttcc
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100526 12 +  38429054 G------G-----GTGGA-T-TTTC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28754  9 +     91421 g------t--------AA-T-TCCC
i Pygathrix_cinerea.k141_1153803                         C 0 I 55
s Pygathrix_nigripes_b.ctg100                                  155306  9 -   7812017 g------t--------AA-T-TCCC
i Pygathrix_nigripes_b.ctg100                               C 0 I 55
s Pygathrix_nigripes_a.k141_215492                              9611  9 +     72585 g------t--------AA-T-TCCC
i Pygathrix_nigripes_a.k141_215492                         C 0 I 55
s Rangifer_tarandus.RanTarSib_scaffold_29737                   429 12 -     55207 t------gg--t---aaa-t-ttcc
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37024645 19 -  90668790 CATGTGAG-----TTAAA-AATCTC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916145 12 +   3329780 g------gg--t---aac-t-ttcc
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3273  9 +      7119 g------t--------AA-T-TCCC
i Rhinopithecus_bieti.k119_778604                        C 0 I 29
s Rhinopithecus_roxellana.NC_044550.1                    104123888  9 + 195417433 g------T--------AA-T-TCCC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 55
s Rhinopithecus_strykeri.ctg102                             238115  9 -   7961872 g------t--------AA-T-TCCC
i Rhinopithecus_strykeri.ctg102                          C 0 I 29
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76690 12 -    116970 g------gg--t---aaa-T-TTCC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_2012906                                373  9 -      1130 C------T--------AA-T-TCCC
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5275  9 +      6077 C------T--------AA-T-TCCC
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5369  9 +      5971 C------T--------AA-T-TCCC
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5286  9 +      5932 C------T--------AA-T-TCCC
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3631  9 -      4390 C------T--------AA-T-TCCC
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393388  9 - 209938924 C------T--------AA-T-TCCC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5234  9 +      5979 C------T--------AA-T-TCCC
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1804  9 -     22275 C------T--------AA-T-TCCC
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9661 12 +     16473 G------G-----GTAAA-T-TTCC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110397  9 + 121099817 G------T--------AA-T-TGCC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31964  9 -     47369 g------t--------AA-T-TGCC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32350  9 -     79414 g------t--------AA-T-TGCC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29041  9 -     34454 g------t--------AA-T-TGCC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16442  9 -     22428 g------t--------AA-T-TGCC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31596  9 -     47109 g------t--------AA-T-TGCC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239648  9 +   5703754 g------t--------AA-T-TGCC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9238  9 +     21866 g------t--------AA-T-TGCC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    116996 12 +    313613 A------G-----GTAAA-T-TTTT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                           193  9 +     11297 G------T--------AA-T-TCCC
i Semnopithecus_entellus.k141_583282                     C 0 I 55
s Semnopithecus_hypoleucos.k141_1910531                      30586  9 +     58920 g------t--------AA-T-TCCC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 I 55
s Semnopithecus_johnii.k141_843753                           17084  9 -     45317 g------t--------AA-T-TCCC
i Semnopithecus_johnii.k141_843753                       C 0 I 55
s Semnopithecus_priam.k141_714795                            24742  9 -     42441 g------t--------AA-T-TCCC
i Semnopithecus_priam.k141_714795                        C 0 I 55
s Semnopithecus_schistaceus.k141_1432920                     27420  9 -     29113 G------T--------AA-C-TCCC
i Semnopithecus_schistaceus.k141_1432920                 C 0 I 53
s Semnopithecus_vetulus.k141_244474                          30495  9 -     48123 g------t--------AA-T-TCCC
i Semnopithecus_vetulus.k141_244474                      C 0 I 55
s Solenodon_paradoxus.SolPar_flattened_line_126            1865534 12 -   1910179 a------g--ct---aaa-t-TTCC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672609 12 +  18376816 A------A-----TTGGT-T-TTCC
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869771 12 +   3870691 a------gg--t---aAA-T-TCTC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8139 12 -     97271 g------gg--t---gaa-t-ttcc
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126306 11 +    196729 -------gg--t---gaa-T-TTCA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645347 14 +  69701581 g------g--at-aaaaa-t-ttct
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392562  9 +   1523678 g------t--------AA-T-TCTC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15718 12 +     22964 a------gg--t---aaa-t-ttcc
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      193032 12 +    199430 g------G-----ATACA-T-TTTC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    107000 12 -    539355 g------G-----ATACA-T-TTTC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                2070 12 +      9917 a---gttt--------aa-t-tctc
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8868 12 +     20590 a---gttt--------aa-t-tctc
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354801  9 - 186847797 g------T--------AA-T-TCCC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25453 12 -     33621 a------g---tt--aaa-t-TTCC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481570 12 -    610378 a------ggca-----cg-t-ttcc
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22551  9 +     26378 g------t--------AA-T-TCCC
i Trachypithecus_auratus.k141_1189070                    C 0 I 39
s Trachypithecus_crepusculus.k141_539312                     35295  9 -     78344 g------t--------AA-T-TCCC
i Trachypithecus_crepusculus.k141_539312                 C 0 I 55
s Trachypithecus_cristatus.k141_180416                       21876  9 +     25722 g------t--------AA-T-TCCC
i Trachypithecus_cristatus.k141_180416                   C 0 I 39
s Trachypithecus_francoisi.k141_1453105                      30251  9 -     62838 g------t--------AA-T-TCCC
i Trachypithecus_francoisi.k141_1453105                  C 0 I 55
s Trachypithecus_geei.k141_1001272                           30295  9 +     46913 g------t--------AA-T-TCCC
i Trachypithecus_geei.k141_1001272                       C 0 I 35
s Trachypithecus_germaini.k141_57262                         11034  9 -     28527 g------t--------AA-T-TCCC
i Trachypithecus_germaini.k141_57262                     C 0 I 39
s Trachypithecus_hatinhensis.k141_31479                      32186  9 -     64340 g------t--------AA-T-TCCC
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 55
s Trachypithecus_laotum.k141_928651                          30224  9 -     63452 g------t--------AA-T-TCCC
i Trachypithecus_laotum.k141_928651                      C 0 I 55
s Trachypithecus_leucocephalus.k141_96450                    11671  9 +     22490 g------t--------AA-T-TCCC
i Trachypithecus_leucocephalus.k141_96450                C 0 I 55
s Trachypithecus_melamera.k141_591572                         5094  9 -      6147 g------t--------AA-T-TCCC
i Trachypithecus_melamera.k141_591572                    C 0 I 37
s Trachypithecus_obscurus.k141_848057                        12007  9 -     13050 g------t--------AA-T-TCCC
i Trachypithecus_obscurus.k141_848057                    C 0 I 35
s Trachypithecus_pileatus.k141_2622778                        3265  9 +     19340 g------t--------AA-T-TCCC
i Trachypithecus_pileatus.k141_2622778                   C 0 I 35
s Tragulus_javanicus.TraJav_scaffold_3462                   175280 12 -    200418 g------gg--t---aCC-T-TTCC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6482950 12 -  10818551 a------gg--t---acA-T-GCCC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836501 12 -   4065304 a------ag-a----aaa-t-ttcc
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10523 12 -     70247 a------ag-a----aaa-t-ttcc
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367156 12 -  33153633 g------gg--t---aaa-t-ttcc
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    4956 12 -     21056 A------A-----GTAAA-T-TTCT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183507 11 +   5085361 g------g---t---gaa-t-ttcc
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  26665 10 -     30710 a------t--------aaat-tctc
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25572 10 -    147434 a------t--------aaat-tctc
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77689 12 +   5488506 g------ggca-----aa-t-gtcc
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106259 12 -    112863 G------G-----GTGCA-T-TTTC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175526 12 -    224448 a------gg--t---aAA-T-TCTC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30499 11 -     86975 G------G-----GTG-A-T-TTCC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1332 12 -      1899 T------C-----ATAAA-T-CGCC
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Trachypithecus_phayrei.ctg124                             257169  9 -   6242583 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51491  0 +     77746 C
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8403 19 +     36723 TG-AA--------AGA---TGT----CTCT------------CT-C-AG
s Acinonyx_jubatus.LLWD01001279.1                           814279  8 +   1699592 TG-AT--------GAA----A----------------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 20
s Acomys_cahirinus.AcoCah_scaffold_21377                     27670 25 +     63021 TGGGT-----AGAA-------G----CTGTCACA-TA----TG--T-AA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416947  8 +  29979442 tg-at--------aga----g----------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 20
s Ailurus_fulgens.LNAC01001112.1                            217067  8 +    347723 tg-at--------aga----a----------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 20
s Allactaga_bullata.AllBul_scaffold_20030                    19911 30 -     61208 tg-ct---a-ga-ag------g----tTGTCATT-TAAAAATCGAT-T-
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49560 17 +     53615 TG-AA--------AGT---TGT----Ct--------------ct-t-ag
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1587 17 +     13857 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18142 17 -     21945 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19827 17 +     32033 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73595 19 -     84148 TA-AA--------AGA---TGT----Ctat------------ct-t-ag
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45834 19 -     78289 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45273 19 +     55831 TA-AA--------AGA---TGT----Ctat------------ct-t-ag
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43723 19 -     64179 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            830 19 -      3959 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42348 19 +     45454 TA-AA--------AGA---TGT----Ctat------------ct-t-ag
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              47997 19 +     70886 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10170 19 +     30854 TA-AA--------AGA---TGT----Ctat------------ct-t-ag
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34304 19 +     42133 TA-AA--------AGA---TGT----Ctat------------ct-t-ag
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587124  8 +   2318259 tg-at--------aca----a----------------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 20
s Antilocapra_americana.AntAmePen_scaffold_21030             52201  8 -     68529 tg-at--------ttt----a----------------------------
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 20
s Aotus_azarae.k141_887050                                    2561 19 +     17741 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3186 19 -     15923 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673468 19 +   5030052 TG-AA--------AGA---TGT----CTAT------------CT-T-AG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3462 19 -     16391 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3021 19 -     17186 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      24924 19 -     32367 TG-AT--------AA------A-AGGTtgt------------ca-t-ag
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6803  8 -     15198 tg-ac--------aga----a----------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 20
s Ateles_geoffroyi_b.tarseq_1536                               276060 19 +  21539123 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12227 19 +     48076 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7362 19 -     28759 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34917 19 +     44353 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50287 19 -     71267 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24345 19 -     33135 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7623 19 +     11645 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7631 19 -     19611 TG-AA--------AGA---TGG----Ctgc------------tt-t-ag
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964891  8 -  23207421 tg-at--------aca----a----------------------------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 22
s Balaenoptera_bonaerensis.DF411050.1                         1391  8 -     25979 tg-at--------aca----a----------------------------
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 22
s Beatragus_hunteri.BeaHun_scaffold_7278                     88131  8 +    124022 tg-at--------aca----a----------------------------
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 20
s Bison_bison.KN261452.1                                     23660  8 +    288883 tg-at--------aca----a----------------------------
i Bison_bison.KN261452.1                                 C 0 I 20
s Bos_indicus.CM003047.1                                  20358050  8 +  48749331 tg-at--------acn----a----------------------------
i Bos_indicus.CM003047.1                                 C 0 I 20
s Bos_mutus.JH880303.1                                      756614  8 +   1948126 tg-at--------aca----a----------------------------
i Bos_mutus.JH880303.1                                   C 0 I 20
s Bos_taurus.CM000203.6                                   27546756  8 -  45695690 tg-at--------acg----a----------------------------
i Bos_taurus.CM000203.6                                  C 0 I 20
s Bubalus_bubalis.KI419123.1                               1531764  8 -   4408762 tg-at--------aca----a----------------------------
i Bubalus_bubalis.KI419123.1                             C 0 I 20
s Cacajao_ayresi.k141_96119                                   9151 19 +     28062 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44445 19 -     91139 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21971 19 +     95584 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21884 19 +    119600 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11542 15 +     18648 TG-AA--------AGA---tg--------t------------ct-t-ag
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11058 15 -     13885 TG-AA--------AGA---Cg--------t------------ct-t-ag
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3144 18 -      8861 TG-AA--------AGAAGAtg--------t------------ct-t-ag
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455536 15 + 189096842 TG-AA--------AGA---TG--------T------------CT-T-AG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3059 15 +      8664 TG-AA--------AGA---tg--------t------------ct-t-ag
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632365  8 +  17673402 tg-at--------aca----a----------------------------
i Camelus_bactrianus.KN276810.1                          C 0 I 33
s Camelus_dromedarius.KN272107.1                           4666652  8 +   7040546 tg-at--------aca----a----------------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 33
s Camelus_ferus.KB017975.1                                 1210310  8 +   1652518 tg-at--------aca----a----------------------------
i Camelus_ferus.KB017975.1                               C 0 I 33
s CanFam4.chr16                                           42506637  8 +  60362399 TG-AT--------AGA----A----------------------------
i CanFam4.chr16                                          C 0 I 20
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10273  8 -     23171 TG-AT--------AGA----A----------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 20
s Canis_lupus_dingo.QKWQ01000480.1                          223616  8 +   9314153 TG-AT--------AGA----A----------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 20
s Canis_lupus_familiaris.chr16                            41616751  8 +  59632846 tg-at--------aga----a----------------------------
i Canis_lupus_familiaris.chr16                           C 0 I 20
s Canis_lupus_orion.HG994398.1                            45108332  8 -  63665305 TG-AT--------AGA----A----------------------------
i Canis_lupus_orion.HG994398.1                           C 0 I 20
s Capra_aegagrus.CM003241.1                               27410853  8 -  46296322 tg-at--------aca----a----------------------------
i Capra_aegagrus.CM003241.1                              C 0 I 20
s Capra_hircus.CM004588.1                                 26593127  8 +  44709034 tg-at--------aca----a----------------------------
i Capra_hircus.CM004588.1                                C 0 I 20
s Capromys_pilorides.CapPil_scaffold_762519                    868 19 -      1607 TG-AT--------AG------A-TGGCAgt------------ct-t-ag
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272169 19 +    496798 TG-AA--------AGA---TGG----TTGT------------CT-T-AG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1673  8 +      9923 tg-ac--------aga----a----------------------------
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 20
s Castor_canadensis.CasCan_scaffold_39952                    29038 19 -     39886 tg-at-gga----ag------t----ctgt------------tt-t-ag
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80963  8 -    217609 tg-aa--------aca----a----------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 21
s Cavia_aperea.AVPZ01000300.1                              4997761 19 +  23392119 TG-AT--------AG------A-TGGCAGA------------ct-t-ag
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001203 19 +  23407841 TG-AT--------AG------A-TGGCAGA------------ct-t-ag
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64282 19 -     66877 TG-AT--------AG------A-TGGCAGA------------ct-t-ag
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6457 15 -     12580 TG-AA--------AGA---tg--------t------------ct-t-ag
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44515 15 +     53515 TG-AA--------AGA---tg--------t------------ct-t-ag
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374283 19 -  26074798 TG-AA--------AGA---TGC----CTAT------------CT-T-AG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9337 19 -     34880 TG-AA--------AGA---TGC----CTAT------------CT-T-AG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68433 19 -     89041 TG-AA--------AGA---TGC----CTAT------------CT-T-AG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4129 19 -      5494 tg-aa--------aga---cgg----ttgt------------ct-t-ag
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493580  8 -  27778364 tg-at--------agc----g----------------------------
i Ceratotherium_simum.JH767749.1                         C 0 I 20
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20413  8 +     27315 tg-at--------agc----g----------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 20
s Cercocebus_atys.KQ010504.1                                142642 17 -   4669795 TG-AA--------AGA---TGT----CT--------------CT-T-AG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46381 17 +     47900 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1814 17 -     14410 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46198 17 -    148725 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28474 17 -     40656 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8433 17 +     20796 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13547 17 -     17524 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29279 17 -     34525 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13059 17 -     25376 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365646 17 -  39242232 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271373 17 +  21565898 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33738 17 -     45857 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28639 17 -     32606 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4802 17 +      8499 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27200 17 +     70610 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24161 17 +     36323 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32035 19 -     33796 TG-AA--------AGG---TGG----CTGC------------TT-T-GG
i Cheirogaleus_major.k141_666340                         C 0 I 2
s Cheirogaleus_medius.k141_759766                             6533 19 -     15404 tg-aa--------agg---tgg----ctgc------------tt-t-ag
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10262 12 -     32913 TG-AA--------AGG---tgt----ct---------------------
i Cheracebus_lucifer.k141_2312002                        C 0 I 3
s Cheracebus_lugens.k141_1179667                             20675 12 -     40346 TG-AA--------AGG---tat----ct---------------------
i Cheracebus_lugens.k141_1179667                         C 0 I 3
s Cheracebus_regulus.k141_471822                             20930 12 +    216457 TG-AA--------AGG---tat----ct---------------------
i Cheracebus_regulus.k141_471822                         C 0 I 3
s Cheracebus_torquatus.k141_890198                           20719 12 +     39636 TG-AA--------AGG---tat----ct---------------------
i Cheracebus_torquatus.k141_890198                       C 0 I 3
s Chinchilla_lanigera.JH722012.1                           1240098 19 -   2543920 TG-AC--------AG------A-CGGCAAt------------ct-t-ag
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            382 12 +      1057 TG-AA--------CGA---tgt----ct---------------------
i Chiropotes_albinasus.k141_2628359                      C 0 I 3
s Chiropotes_israelita.k141_313004                           43785 19 -    112038 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9336 19 +     34062 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345062 17 +  18827391 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11601 17 -     44032 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306453 17 - 135778131 TG-AA--------AGA---TGT----CT--------------CT-T-GG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                 76  8 -      4087 TG-AT--------ATG----A----------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 I 19
s Colobus_angolensis.KN981557.1                             410860 15 -   2368649 TG-AA--------AGA---TG------T--------------CT-T-AC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380744 15 - 200372422 TG-AA--------AGA---tg------t--------------ct-t-ag
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4301 15 -     84244 TG-AA--------AGA---tg------t--------------ct-t-ag
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808304 16 +  53390261 tg-aatttattacaGA----G----------------------------
i Condylura_cristata.JH655891.1                          C 0 I 13
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4163  8 -      8242 tg-ag--------aga----a----------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 20
s Cricetomys_gambianus.CriGam_scaffold_14425                 46239 31 -     83289 TGGGT-----GGAAG------G----CTGCCACT-TACATACCT-T-AA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213118014 28 - 224834208 TGGGT-----GGAAG------G----CTGTAACT-TACATACC--T---
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5734  8 +     87169 tg-at--------aaa----a----------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 20
s Ctenodactylus_gundi.CteGun_scaffold_65                    646774  7 -   1526836 tc-ac--------ag------a---------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19935 19 +     50838 TG-AT--------AG------ACAG-CAGA------------ct-t-ag
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5671 19 +     36344 TG-AT--------AG------A-TGGCAGA------------ct-t-ag
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29460 19 +     75252 tg-ac--------ag------a-ttgcaga------------ct-t-gc
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293936 19 +  12879189 TA-AA--------AGA---TCG----CTGC------------TT-T-AC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633297  8 -  35494412 tg-at--------aca----a----------------------------
i Delphinapterus_leucas.KZ290073.1                       C 0 I 22
s Desmodus_rotundus.KZ672289.1                            11866662  8 -  20541912 tg-at--------aga----a----------------------------
i Desmodus_rotundus.KZ672289.1                           C 0 I 27
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665852  8 -   1390856 tg-ac--------tgc----g----------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 20
s Diceros_bicornis.DicBicMic_scaffold_5955                  140652  8 -    198055 tg-at--------agc----t----------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 20
s Dinomys_branickii.DinBra_scaffold_10381                   100165 19 -    115145 TG-GT--------GG------A-TGGCAAC------------ct-t-ag
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951943 19 -  37912305 TG-AT-----GAAAG------A----Ctgt------------at-t-tg
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6877 17 -     10735 TG-AT-----GAAAG------A----Ctgt------------ct-t---
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Echinops_telfairi.JH980293.1                            62856890  8 - 111700974 TG-TG--------AGG----A----------------------------
i Echinops_telfairi.JH980293.1                           C 0 I 19
s Eidolon_helvum.AWHC01266696.1                               7650  8 +     19438 tg-at--------aga----a----------------------------
i Eidolon_helvum.AWHC01266696.1                          C 0 I 20
s Elaphurus_davidianus.JRFZ01104969.1                       241481  8 -    607251 tg-at--------aca----a----------------------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 20
s Elephantulus_edwardii.JH947257.1                         1227093  8 +  10337057 ta-tt--------agg----a----------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 19
s Ellobius_lutescens.LOEQ01008920.1                          33880 29 +    110024 TGGAT-----GGAAG------G----CTGTAACT-TATATAGC--T-A-
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15816 29 +     18970 TGGGT-----GGAAG------G----CTGTAACT-TATATAGC--T-A-
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917479  8 +  41312741 tg-at--------aga----a----------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 20
s Eptesicus_fuscus.JH977646.1                             12580255  8 +  14770903 tg-at--------aga----a----------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 20
s Equus_asinus.JREZ01000139.1                              3042797  8 -   4378816 tg-at--------aga----a----------------------------
i Equus_asinus.JREZ01000139.1                            C 0 I 20
s Equus_caballus.CM000403.2                               21376736  8 +  39960074 tg-at--------aga----a----------------------------
i Equus_caballus.CM000403.2                              C 0 I 20
s Equus_przewalskii.KK951119.1                              412718  8 -    498745 tg-at--------aga----a----------------------------
i Equus_przewalskii.KK951119.1                           C 0 I 20
s Erinaceus_europaeus.JH835339.1                           3667494  7 +   7059049 T--AT--------AGA----A----------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 20
s Erythrocebus_patas.Contig38                               264591 17 +  21539334 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72505  8 -    133382 tg-at--------aca----a----------------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 22
s Eubalaena_japonica.EubJap_flattened_line_57114               218  8 +     25849 TG-AT--------ACA----A----------------------------
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 I 22
s Eulemur_albifrons.k141_51491                               16152 19 -     24895 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43862 19 -     70999 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87832 19 +    112731 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44395 19 +     68309 tg-aa--------aga---tgg----ctac------------tt-t-ag
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54719 19 -     65740 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25352 19 -     75513 tg-aa--------aga---tgg----ctac------------tt-t-ag
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49546 19 -     97555 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6270 19 +     30972 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  43990 19 -     52037 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60393 19 -    111500 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248189  8 - 206538554 TG-AT--------GAA----A----------------------------
i Felis_catus.CM001381.2                                 C 0 I 20
s Felis_catus_fca126.CM031415.1                          185117975  8 - 205367284 TG-AT--------GAA----A----------------------------
i Felis_catus_fca126.CM031415.1                          C 0 I 20
s Felis_nigripes.FelNig_flattened_line_31944                 29075  8 -     30238 TG-AT--------GAA----A----------------------------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 20
s Fukomys_damarensis.KN121974.1                            2923315 19 -   3816255 ca-aT--------AG------A-AGGCAgt------------ct-t-ag
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2531 19 -     28519 tg-aa--------aga---tga----ctgc------------ct-t-ag
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93198  8 -     95226 tg-at--------tca----a----------------------------
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 20
s Glis_glis.GliGli_scaffold_163929                            2681 10 -      6791 ---------------------a----ctgt------------ct-t-ag
i Glis_glis.GliGli_scaffold_163929                       I 2 C 0
s Gorilla_beringei.k141_3586045                              19282 19 -     19819 TG-AA--------AGA---TGT----CTCt------------ct-c-ag
i Gorilla_beringei.k141_3586045                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                257703 19 - 186649187 tg-aa--------aga---tGT----CTCt------------ct-c-ag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3746 10 -     78134 ---------------------a----ctat------------ct-t-aa
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Hapalemur_alaotrensis.k141_330369                          16077 19 -     40692 tg-aa--------aga---tgt----ctgc------------tt-t-ag
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37476 19 +     49394 tg-aa--------aga---tgt----ctgc------------tt-t-ag
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62347 19 -     66874 tg-aa--------aga---tgt----ctgc------------tt-t-ag
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11218 19 -     42923 tg-aa--------aga---tgc----ctgc------------tt-t-ag
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18220 19 -     53142 tg-aa--------aga---tgc----ctgc------------tt-t-ag
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32167  8 -    327341 tg-at--------aaa----a----------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 20
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10864  8 +     48891 tg-at--------aca----a----------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 20
s Heterocephalus_glaber.JH602082.1                         1933737 19 -  22651954 CA-AT--------AG------A-AGGCAgt------------ct-t-ag
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1609  8 +      8654 tg-tt--------agg----a----------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 I 32
s Hippopotamus_amphibius.HipAmp_scaffold_38803                9007  8 -     36432 tg-at--------aca----a----------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 21
s Hipposideros_armiger.JXIK01000431.1                      1553005  8 -   1711038 tg-at--------aga----a----------------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 20
s Hipposideros_galeritus.HipGal_scaffold_164997               2442  8 -      2730 tg-at--------aga----a----------------------------
i Hipposideros_galeritus.HipGal_scaffold_164997          C 0 I 20
s Hoolock_leuconedys.ctg274                                    144174 19 -    630532 TG-AA--------AGA---TGT----CTCt------------ct-t-ag
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71533  8 +     83186 tg-at--------aag----g----------------------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 20
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73152 19 +    143317 TA-AT--------AA------A-TGGCAGA------------ct-t-ag
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7215 19 +     12352 TG-AA--------GGA---TGT----CTCt------------ct-t-ag
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14399 19 +     55766 TG-AA--------GGA---TGT----CTCt------------ct-t-ag
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2053999 19 + 191637585 TG-AA--------GGA---TGT----CTCt------------ct-t-ag
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802877 19 +  11177569 TG-AA--------GGA---TGT----CTCt------------ct-t-ag
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8491 19 -    135385 TG-TC--------AG------A-AGGCAgt------------ct-c-ag
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388205 19 +   7955117 TA-AT--------AG------A-AAGCAgt------------tt-t-ag
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3765 19 +     11955 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11400  8 -     16823 TG-AT--------ACA----A----------------------------
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 22
s Jaculus_jaculus.JH725527.1                               1241396 31 +   9596543 tg-ct---a-ga-ag------g----ttttcatt-taaaaatatag-tt
i Jaculus_jaculus.JH725527.1                             C 0 I 74
s Kogia_breviceps.KogBre_flattened_line_3970                 73238  8 -     97402 tg-ac--------aca----a----------------------------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 22
s Lagothrix_lagothricha.k141_246028                          44611 19 +    110728 TG-AA--------AGA---TGT----Ctat------------ct-t-ag
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64553  8 -     65777 tg-at--------aga----a----------------------------
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 20
s Lemur_catta.scaffold_24                                 14760874 19 +  30322482 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5518 15 -     13097 TG-AA--------CGA---tg--------t------------ct-t-ag
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5272 15 +      5940 TG-AA--------CGA---tg--------t------------ct-t-ag
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5095 15 -      5717 TG-AA--------CGA---tg--------t------------ct-t-ag
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      248 15 +      8855 TG-AA--------AGA---CA--------t------------ct-t-ag
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5050 15 -     13645 TG-AA--------AGA---CA--------t------------ct-t-ag
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10390 19 +     29618 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10386 19 +     31569 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10396 19 +     24756 tg-aa--------aga---cgg----ctgc------------tt-t-ag
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10396 19 +     16388 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814870  8 -   3914936 tg-at--------aga----a----------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 I 20
s Lipotes_vexillifer.KE559953.1                             342585  8 +    662738 tg-at--------aca----a----------------------------
i Lipotes_vexillifer.KE559953.1                          C 0 I 22
s Lophocebus_aterrimus.ctg367                               335524 17 -   1826925 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086275  8 +  43346337 CG-TT--------AGG----A----------------------------
i Loxodonta_africana.GL010049.1                          C 0 I 32
s Lycaon_pictus.CM007581.1                                41615906  8 +  59628241 tg-at--------aga----a----------------------------
i Lycaon_pictus.CM007581.1                               C 0 I 20
s Macaca_arctoides.k141_1757516                              46916 17 -     61512 TG-AA--------AGA---TGT----Ct--------------ct-c-ag
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374578 17 -  60120075 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26846 17 +     30207 TG-AA--------AGA---TGt----gt--------------ct-t-ag
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1684 17 -      5035 TG-AA--------AGA---TGt----gt--------------ct-t-ag
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26799 17 +     30527 TG-AA--------AGA---TGt----gt--------------ct-t-ag
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37975 17 -     50087 TG-AA--------AGA---TGt----gt--------------ct-c-ag
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47719 17 +     51645 TG-AA--------AGA---TGt----gt--------------ct-t-ag
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416922 17 - 187317192 TG-AA--------AGA---TGT----GT--------------CT-T-AG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401152 17 +  25927173 TG-AA--------AGA---TGT----GT--------------CT-C-AG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50324 17 -     62418 TG-AA--------AGA---TGt----gt--------------ct-t-ag
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2855 17 +     14901 TG-AA--------AGA---TGt----gt--------------ct-t-ag
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46796 17 +     59329 TG-AA--------AGA---TGt----gt--------------ct-c-ag
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272704 17 +    668171 TG-AA--------AGA---TGt----gt--------------ct-c-ag
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1336 17 -      5049 TG-AA--------AGA---TGt----gt--------------ct-t-ag
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4502 17 +     17132 TG-AA--------AGA---TGt----gt--------------ct-t-ag
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224632  8 -    270270 TG-AT--------AGA----A----------------------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 19
s Mandrillus_leucophaeus.scaffold280                        323992 17 +  24302211 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358823 17 -    752769 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674914  8 -    737560 tg-at--------gga----a----------------------------
i Manis_javanica.JSZB01003497.1                          C 0 I 20
s Manis_pentadactyla.KN006162.1                             222214  8 +    317179 tg-at--------gga----a----------------------------
i Manis_pentadactyla.KN006162.1                          C 0 I 20
s Marmota_marmota.CZRN01000018.1                           7502418 19 +  40650429 TA-AT--------AG------A-AAGCAgt------------tt-t-ag
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27598  8 -     74585 TG-AT--------AGA----A----------------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 20
s Meriones_unguiculatus.MerUng_scaffold_7390                 52239 30 -    140813 TGGGT-----GGAA-------G-A--CTGCTACTCTCATA-CC--T-AA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     88869  8 +     93471 tg-at--------aca----a----------------------------
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 22
s Mico_argentatus.k141_582562                                11640 15 +     17804 TG-AA--------AGA---tg--------t------------ct-t-ag
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12140 15 -     12984 TG-AA--------AGA---tg--------t------------ct-t-ag
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20459 15 -     26561 TG-AA--------AGA---tg--------t------------ct-t-ag
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986228 19 +  93316391 TA-AA--------AGA---TGG----CTGC------------TT-T-AG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48072  8 +    145209 TG-CA--------AGG----G----------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 19
s Micronycteris_hirsuta.MicHir_scaffold_2233                186452  8 +    200668 tg-at--------aga----a----------------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 20
s Microtus_ochrogaster.CM001695.1                         15965300 29 +  27267610 TGGGT-----GGAAG------G----CTGTAACT-TATACAGC--T-G-
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364600  8 -   8254450 tg-at--------aga----a----------------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 20
s Miniopterus_schreibersii.MinSch_scaffold_23309             43520  8 -     48117 TG-AT--------AGA----A----------------------------
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 20
s Miopithecus_ogouensis.k141_1534655                         24090 17 -     27822 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9881  8 +     27589 TG-AT--------AGA----A----------------------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 20
s Mirza_zaza.k141_766280                                     54003 19 -     62432 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mus_caroli.LT608237.1                                   35596492 16 + 120012414 -----------------------------TCATT-TATGTACC--T-AA
i Mus_caroli.LT608237.1                                  I 7 C 0
s Mus_musculus.chr8                                       41689666 15 + 129401213 -----------------------------TCATT-TTGTA-CC--T-AA
i Mus_musculus.chr8                                      I 7 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   360974  8 +    437263 TG-AT--------ACA----A----------------------------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 22
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180697  8 +    366855 tg-ac--------cga----a----------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 20
s Moschus_moschiferus.MosMos_scaffold_13123                  27309  8 -     82753 cg-at--------aca----a----------------------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 20
s Mungos_mungo.MunMun_flattened_line_18455                   19901  8 -     63510 TG-AT--------AAA----A----------------------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 16
s Murina_feae.MurFea_scaffold_17764                          42557  8 +     47283 tg-at--------aga----a----------------------------
i Murina_feae.MurFea_scaffold_17764                      C 0 I 15
s Mus_pahari.LT608297.1                                   58217958 29 +  89631738 TGGGT-----GGAAG------G----CTGTTGTT--ATGTACC--T-AA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498950 16 + 130317789 -----------------------------TCATT-TATGTACC--T-AA
i Mus_spretus.CM004101.1                                 I 7 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85585  9 -     86153 --------------------------Ctat------------ct-t-aa
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 3 C 0
s Mustela_putorius.JH418006.1                             14356497  8 +  14710649 TG-AT--------AGA----A----------------------------
i Mustela_putorius.JH418006.1                            C 0 I 20
s Myocastor_coypus.MyoCoy_scaffold_15261                     64456 19 +     67721 TG-AT--------AG------A-TGGCAGT------------GC-C-AG
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794819  8 +  10118263 tg-at--------aga----a----------------------------
i Myotis_brandtii.KE162005.1                             C 0 I 20
s Myotis_davidii.KB100139.1                                4388994  8 +   6019432 tg-at--------aga----a----------------------------
i Myotis_davidii.KB100139.1                              C 0 I 20
s Myotis_lucifugus.GL429869.1                               385022  8 +   4330536 tg-at--------aga----a----------------------------
i Myotis_lucifugus.GL429869.1                            C 0 I 20
s Myotis_myotis.MyoMyo_scaffold_66571                         3807  8 +     18357 TG-AT--------AGA----A----------------------------
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 20
s Nannospalax_galili.KL204047.1                             948126 25 +   3037898 AGGGG-----GGGA-------G----CTGTCA---CA--TGT-C-T-AG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30869 15 +     34575 TG-AA--------AGA---tg------t--------------ct-t-ag
i Nasalis_larvatus.k141_1350636                          I 55 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233640  8 -   7148211 tg-at--------aca----a----------------------------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 22
s Noctilio_leporinus.NocLep_scaffold_7894                   129308  8 -    149072 tg-at--------aga----a----------------------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 3
s Nomascus_annamensis.k141_1771965                           55105 19 -    132029 TG-AA--------AGA---TGT----CTCt------------ct-t-ag
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11200 19 -     16345 TG-AA--------AGA---TGT----CTCt------------ct-t-ag
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17085 19 +     22201 TG-AA--------AGA---TGT----CTCt------------ct-t-ag
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415306 19 -  22158432 TG-AA--------AGA---TGT----CTCt------------ct-t-ag
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27483 19 -     54323 TG-AA--------AGA---TGT----CTCt------------ct-t-ag
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199502  8 +   9404916 tg-at--------aga----a----------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 20
s Ochotona_princeps.JH802162.1                             2558255 14 -   3988456 tg-aa--------aaa----a--------a------------tt-a-aa
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056546 19 -  11899542 TG-AT--------AG------A-TGGCAgt------------ct-t-ag
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453298  8 +   2017862 tg-at--------aga----a----------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 I 20
s Odocoileus_virginianus.KZ100018.1                         438396  8 -    630418 tg-at--------aca----a----------------------------
i Odocoileus_virginianus.KZ100018.1                      C 0 I 20
s Okapia_johnstoni.LVCL01S0005463.1                          16279  8 +    150152 tg-at--------tca----a----------------------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 20
s Ondatra_zibethicus.OndZib_scaffold_7387                    95919 29 -    140218 TGGGT-----GGAAG------G----CTATAACT-TATATACC--T-A-
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6490 29 -     41509 TGGGT-----GGAAG------G----CTGTAACT-TACATATG--T-A-
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8104043  8 +  10937097 TG-AT--------ACA----A----------------------------
i Orcinus_orca.KB316932.1                                C 0 I 22
s Orycteropus_afer.OryAfe_flattened_line_201229               1343  8 +     11607 TA-TT--------AGG----G----------------------------
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 I 19
s Otocyon_megalotis.JAEUCK010005147.1                        40548  8 +    559221 tg-at--------aga----a----------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 20
s Ovis_aries.CM001607.2                                   26405991  8 -  44047080 tg-at--------aca----a----------------------------
i Ovis_aries.CM001607.2                                  C 0 I 20
s Ovis_canadensis.OviCan_scaffold_67953                       6510  8 +     17875 tg-at--------aca----a----------------------------
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 20
s Pan_paniscus.AJFE02001033.1                                  448 19 +      1169 TG-AA--------AGA---TGT----CTCC------------CT-C-AG
i Pan_paniscus.AJFE02001033.1                            C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             15445 20 -     26668 TG-AA--------AGA---TGT----CTCT------------CT-CCAG
i Pan_troglodytes.NBAG03003091.1                         I 64 I 371
s Panthera_onca.PanOnc_flattened_line_3271                   25898  8 -    230217 tg-at--------aaa----a----------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 20
s Panthera_pardus.KV860321.1                              18463224  8 -  18783137 TG-AT--------AAA----A----------------------------
i Panthera_pardus.KV860321.1                             C 0 I 20
s Panthera_tigris.KE722367.1                               3973883  8 +   8748460 TG-AT--------AAA----A----------------------------
i Panthera_tigris.KE722367.1                             C 0 I 20
s Pantholops_hodgsonii.KE114653.1                          1617516  8 +   2937107 tg-at--------aca----a----------------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 I 20
s Papio_anubis.CM001495.2                                   245001 17 - 183742232 TG-AA--------AGA---TGT----CT--------------CT-T-AG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11286 17 +     21308 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294029 17 -  20919399 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23926 17 -     27687 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     605 17 +     10553 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   565 17 -     10386 TG-AA--------AGA---TGT----Ct--------------ct-t-ag
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16481  8 +     78924 TG-AT--------AAA----A----------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 21
s Perognathus_longimembris.PerPac_flattened_line_89005        3285 19 +      9367 TG-AT-----GGAAG------G----Ctgt------------at-t-tg
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249708 25 +  18517816 TGTGT-----AGAAG------G----CTGTAACT-TA----TG--T-A-
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33322  5 -     56120 ------------------------------------------Tt-t-ag
i Petromus_typicus.PetTyp_scaffold_17301                 I 10 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5568  8 -     63832 tg-at--------aca----a----------------------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 22
s Piliocolobus_badius.k141_2704958                            4251 15 +     55023 TG-AA--------AGA---tg------g--------------ct-t-ag
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3773 15 -     89929 TG-AA--------AGA---tg------t--------------ct-t-ag
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4363 15 +     40849 TG-AA--------AGA---tg------t--------------ct-t-ag
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256038 15 +  14605196 TG-AA--------AGA---TG------T--------------CT-T-AG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5387  8 +     22231 TG-AT--------AGA----A----------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 20
s Pithecia_albicans.k141_1239476                             66153 19 +    207309 TG-AA--------AGA---TGT----Ctgt------------ct-t-ag
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7241 19 -     25401 TG-AA--------AGA---TGT----Ctgt------------ct-t-ag
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               32989 19 +     58159 TG-AA--------AGA---TGT----Ctgt------------ct-t-ag
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33265 19 +     63561 TG-AA--------AGA---TGT----Ctgt------------ct-t-ag
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33025 19 +     51148 TG-AA--------AGA---TGT----Ctgt------------ct-t-ag
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              557995 19 -   4542175 TG-AA--------AGA---TGT----Ctgt------------ct-t-ag
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33009 19 +     51125 TG-AA--------AGA---TGT----Ctgt------------ct-t-ag
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2585  8 +     19503 TG-AT--------ACA----A----------------------------
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 22
s Plecturocebus_bernhardi.k141_2549090                        9427 19 +     39866 TG-AA--------AGG---TGT----Ctgt------------ct-t-ag
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4509 19 -      9282 TG-AA--------AGG---TGT----Ctgt------------ct-t-ag
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43913 19 -     87950 TG-AA--------AGG---TGT----Ctgt------------ct-t-ag
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44307 19 -     88961 TG-AA--------AGG---TGT----Ctgt------------ct-t-ag
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9005 19 -     39403 TG-AA--------AGG---TGT----Ctgt------------ct-t-ag
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43956 19 +     87928 TG-AA--------AGG---TGT----Ctgt------------ct-t-ag
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9004 19 -     60166 TG-AT--------AGG---TGT----Ctgt------------ct-t-ag
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15941 19 -     67232 TG-AA--------AGG---TGT----Ctgt------------ct-t-ag
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43857 19 -     90634 TG-AA--------AGG---TGT----Ctgt------------ct-t-ag
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45324 19 +     89403 TG-AT--------AGG---TGT----Ctgt------------ct-t-ag
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   180859 19 - 189387572 TG-AA--------AGT---TGT----CTCT------------CT-C-AG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195599 19 -   9816681 TG-AA--------AGT---TGT----CTCt------------ct-c-ag
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29451 15 +     69807 TG-AA--------AGA---tg------t--------------ct-t-ag
i Presbytis_comata.k141_1230337                          I 55 C 0
s Presbytis_mitrata.k141_584736                              46632 15 -     80239 TG-AA--------AGA---tg------t--------------ct-t-ag
i Presbytis_mitrata.k141_584736                          I 55 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5600  8 +      7663 tg-tt--------agg----a----------------------------
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 32
s Prolemur_simus.MPIZ01000396.1                            1984022 19 +   4620579 TG-AA--------AGA---TGG----CTGC------------TT-T-AG
i Prolemur_simus.MPIZ01000396.1                          I 10 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567517 19 -   2598838 TG-CA--------AGA---TGG----CCGC------------TT-T-AG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5155 19 -      7103 TG-AA--------AGA---TGG----Ctgc------------tt-t-ag
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5752 19 -     11706 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9489 19 -     30655 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35803 19 +     46564 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96082 19 -     98465 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9721 19 +     35169 TG-AA--------AGA---TGG----Ctgc------------tt-t-ag
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39762 30 +     52041 TGGGT-----GGAA-------G--G-CTGCCACTCTCATA-CC--T-AA
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53590  8 -     66298 tg-at--------aga----a----------------------------
i Pteronotus_parnellii.KE847780.1                        C 0 I 20
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6076  8 -     18639 tg-at--------aga----a----------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 20
s Pteropus_alecto.KB030862.1                               5842202  8 -  28871421 tc-at--------aga----a----------------------------
i Pteropus_alecto.KB030862.1                             C 0 I 20
s Pteropus_vampyrus.KN525825.1                             3538717  8 -   4952924 tc-ac--------aga----a----------------------------
i Pteropus_vampyrus.KN525825.1                           C 0 I 20
s Puma_concolor.QAVW01001104.1                            18100538  8 +  38429054 TG-AT--------GAA----A----------------------------
i Puma_concolor.QAVW01001104.1                           C 0 I 20
s Pygathrix_cinerea.k141_1153803                             28818 15 +     91421 TG-AA--------AGA---tg------t--------------ct-t-ag
i Pygathrix_cinerea.k141_1153803                         I 55 C 0
s Pygathrix_nigripes_b.ctg100                                  155370 15 -   7812017 TG-AA--------AGA---tg------t--------------ct-t-ag
i Pygathrix_nigripes_b.ctg100                               I 55 C 0
s Pygathrix_nigripes_a.k141_215492                              9675 15 +     72585 TG-AA--------AGA---tg------t--------------ct-t-ag
i Pygathrix_nigripes_a.k141_215492                         I 55 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   441  8 -     55207 tg-at--------aca----a----------------------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 20
s Rattus_norvegicus.chr16                                 37024664 30 -  90668790 TGGGT-----GGAGG------G----CTATCATT-TACATACC--T-AA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916157  8 +   3329780 tg-at--------aga----g----------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 19
s Rhinopithecus_roxellana.NC_044550.1                    104123952 15 + 195417433 TG-AA--------AGA---TG------T--------------CT-T-AG
i Rhinopithecus_roxellana.NC_044550.1                    I 55 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76702  8 -    116970 TG-AT--------AGA----A----------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 20
s Saguinus_bicolor.k141_2012906                                382 15 -      1130 TG-AA--------CGA---tg--------t------------ct-t-ag
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5284 15 +      6077 TG-AA--------CGA---Cg--------t------------ct-t-ag
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5378 15 +      5971 TG-AA--------CGA---tg--------t------------ct-t-ag
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5295 15 +      5932 TG-AA--------CGA---tg--------t------------ct-t-ag
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3640 15 -      4390 TG-AA--------TGA---tg--------t------------ct-t-ag
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393397 15 - 209938924 TG-AA--------CGA---tg--------t------------ct-t-ag
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5243 15 +      5979 TG-AA--------CGA---tg--------t------------ct-t-gg
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1813 15 -     22275 TG-AA--------CGA---Cg--------t------------ct-t-ag
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9673  8 +     16473 TG-AT--------ACA----A----------------------------
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 20
s Saimiri_boliviensis.NW_024100920.1                       1110406 19 + 121099817 TG-AA--------AGA---TGG----CTAT------------CT-T-AG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31973 19 -     47369 TG-AA--------AGA---TGG----Ctat------------ct-t-ag
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32359 19 -     79414 TG-AA--------AGA---TGG----Ctat------------ct-t-ag
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29050 19 -     34454 TG-AA--------AGA---TGG----Ctat------------ct-t-ag
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16451 19 -     22428 TG-AA--------AGA---TGG----Ctat------------ct-t-ag
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31605 19 -     47109 TG-AA--------AGA---TGG----Ctat------------ct-t-ag
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239657 19 +   5703754 TG-AA--------AGA---TGC----CTAT------------CT-T-AG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9247 19 +     21866 TG-AA--------AGA---TGC----CTAT------------CT-T-AG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    117008 16 +    313613 TA-AATTTATGGCAGA----G----------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 13
s Semnopithecus_entellus.k141_583282                           257 15 +     11297 TG-AA--------AGA---tg------t--------------ct-t-ag
i Semnopithecus_entellus.k141_583282                     I 55 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30650 15 +     58920 TG-AA--------AGA---tg------t--------------ct-t-ag
i Semnopithecus_hypoleucos.k141_1910531                  I 55 C 0
s Semnopithecus_johnii.k141_843753                           17148 15 -     45317 TG-AA--------AGA---tg------t--------------ct-t-aa
i Semnopithecus_johnii.k141_843753                       I 55 C 0
s Semnopithecus_priam.k141_714795                            24806 15 -     42441 TG-AA--------AGA---tg------t--------------ct-t-aa
i Semnopithecus_priam.k141_714795                        I 55 C 0
s Semnopithecus_schistaceus.k141_1432920                     27482 15 -     29113 TG-AA--------AGA---tg------t--------------ct-t-ag
i Semnopithecus_schistaceus.k141_1432920                 I 53 C 0
s Semnopithecus_vetulus.k141_244474                          30559 15 -     48123 TG-AA--------AGA---tg------t--------------ct-t-ag
i Semnopithecus_vetulus.k141_244474                      I 55 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51491 28 +     77746 -ggtt-gga----ag------G----TAGTAATT-TATATGCC--T-A-
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865546  8 -   1910179 TG-AT--------AGA----A----------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 21
s Sorex_araneus.JH798187.1                                 4672621  8 +  18376816 TG-AT--------AGA----A----------------------------
i Sorex_araneus.JH798187.1                               C 0 I 18
s Spermophilus_dauricus.KZ294078.1                         1869783 19 +   3870691 TA-AT--------AG------A-AAGCAgt------------tt-t-ag
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8151  8 -     97271 tg-at--------aga----g----------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 20
s Suricata_suricatta.SurSur_flattened_line_6629             126317  8 +    196729 TG-AT--------AAA----A----------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 20
s Sus_scrofa.CM000828.4                                    6645361  8 +  69701581 tg-at--------aca----a----------------------------
i Sus_scrofa.CM000828.4                                  C 0 I 21
s Symphalangus_syndactylus.tarseq_199                       392571 19 +   1523678 TG-AA--------AGA---TGT----CTCt------------ct-t-ag
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15730  8 +     22964 tg-aa--------aaa----a----------------------------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 20
s Tapirus_indicus.TapInd_scaffold_7432                      193044  8 +    199430 TG-AT--------AGG----A----------------------------
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 20
s Tapirus_terrestris.TapTer_scaffold_755                    107012  8 -    539355 TG-AT--------AGG----A----------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 20
s Tarsius_lariang.k141_1733899                                2082 19 +      9917 tg-aa--------aga---tgg----ttgt------------ct-t-tg
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8880 19 +     20590 tg-aa--------aga---tgg----ttgt------------ct-t-tg
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354810 17 - 186847797 TG-AA--------AGA---TGT----CT--------------CT-T-AG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25465 19 -     33621 CA-GT--------AG------A-AGGCAgt------------ct-t-ag
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481582  8 -    610378 tg-at--------cga----a----------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 20
s Trachypithecus_crepusculus.k141_539312                     35359 15 -     78344 TG-AA--------AGA---tg------t--------------ct-c-ag
i Trachypithecus_crepusculus.k141_539312                 I 55 C 0
s Trachypithecus_francoisi.k141_1453105                      30315 15 -     62838 TG-AA--------AGA---tg------t--------------ct-t-ag
i Trachypithecus_francoisi.k141_1453105                  I 55 C 0
s Trachypithecus_hatinhensis.k141_31479                      32250 15 -     64340 TG-AA--------AGA---tg------t--------------ct-t-ag
i Trachypithecus_hatinhensis.k141_31479                  I 55 C 0
s Trachypithecus_laotum.k141_928651                          30288 15 -     63452 TG-AA--------AGA---tg------t--------------ct-t-ag
i Trachypithecus_laotum.k141_928651                      I 55 C 0
s Trachypithecus_leucocephalus.k141_96450                    11735 15 +     22490 TG-AA--------AGA---tg------t--------------ct-t-ag
i Trachypithecus_leucocephalus.k141_96450                I 55 C 0
s Trachypithecus_phayrei.ctg124                             257178 15 -   6242583 TG-AA--------AGA---tg------t--------------ct-c-ag
i Trachypithecus_phayrei.ctg124                          I 9 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175292  8 -    200418 TG-AT--------TCA----A----------------------------
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 20
s Trichechus_manatus.JH594705.1                            6482962  8 -  10818551 TG-TT--------AGG----A----------------------------
i Trichechus_manatus.JH594705.1                          C 0 I 32
s Tupaia_chinensis.KB320699.1                              1836513 17 -   4065304 TG-AG--------AAA---TGG----CTG--------------T-T-TG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10535 17 -     70247 ca-ag--------AAA---TGG----CTG--------------T-T-Tg
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367168  8 -  33153633 tg-at--------aca----a----------------------------
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 22
s Uropsilus_gracilis.UroGra_scaffold_46687                    4968 16 -     21056 TG-ACTTTATTGCAGA----A----------------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 13
s Ursus_maritimus.KK499267.1                                183518  8 +   5085361 tg-at--------aga----a----------------------------
i Ursus_maritimus.KK499267.1                             C 0 I 20
s Varecia_rubra.k141_787544                                  26675 19 -     30710 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25582 19 -    147434 tg-aa--------aga---tgg----ctgc------------tt-t-ag
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77701  8 +   5488506 tg-ac--------aca----a----------------------------
i Vicugna_pacos.KN270157.1                               C 0 I 33
s Vulpes_lagopus.VulLag_flattened_line_12041                106271  8 -    112863 TG-AT--------AGA----A----------------------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 20
s Xerus_inauris.XerIna_scaffold_2302                        175538 19 -    224448 TG-AC--------AG------A-AGGCtgt------------tt-t-ag
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30510  8 -     86975 TG-AT--------AGA----A----------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 20
s Zapus_hudsonius.ZapHud_scaffold_286923                      1344 31 -      1899 TG-AG-----AAAAG------G----CTGTCATT-TACATATCTGT-TT
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Dolichotis_patagonum.DolPat_scaffold_80628                 10609  0 +     14636 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Trachypithecus_pileatus.k141_2622778                        3274 35 +     19340 I
e Trachypithecus_obscurus.k141_848057                        12016 35 -     13050 I
e Trachypithecus_melamera.k141_591572                         5103 37 -      6147 I
e Trachypithecus_germaini.k141_57262                         11043 39 -     28527 I
e Trachypithecus_geei.k141_1001272                           30304 35 +     46913 I
e Trachypithecus_cristatus.k141_180416                       21885 39 +     25722 I
e Trachypithecus_auratus.k141_1189070                        22560 39 +     26378 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Rhinopithecus_strykeri.ctg102                             238124 29 -   7961872 I
e Rhinopithecus_bieti.k119_778604                             3282 29 +      7119 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8422 37 +     36723 TCCA--------TTTCT-----------GCTG--------c------aatgtacctt-agactaggtaatt
s Acomys_cahirinus.AcoCah_scaffold_21377                     27695  5 +     63021 TCGG--------T----------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19941  4 -     61208 -TTT--------T----------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49577 37 +     53615 tccg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1604 37 +     13857 tccg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18159 37 -     21945 tccg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19844 37 +     32033 tccg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73614 37 -     84148 tccg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45853 37 -     78289 tcca--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45292 37 +     55831 tccg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43742 37 -     64179 tcca--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            849 38 -      3959 tcca--------tttct-----------gctg--------c------aatgtacgttaagactgggtaatt
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42367 37 +     45454 tccg--------tttct-----------gctg--------c------agtgtacctt-agactgggtaatt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48016 37 +     70886 tcca--------tttat-----------gctg--------c------aatgtacctt-agactgggtaatt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10189 37 +     30854 tccg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34323 37 +     42133 tccg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2580 37 +     17741 tcca--------tttct-----------gctg--------c------aatgtgcctt-agactgcgtaatt
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3205 37 -     15923 tcca--------tttct-----------gctg--------c------aaagtgcctt-agactgcgtaatt
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673487 37 +   5030052 TCCA--------TTTCT-----------GCTG--------C------AAAGTGCCTt-agactgcgtaatt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3481 37 -     16391 tcca--------tttct-----------gctg--------c------aatgtgcctt-agactgcgtaatt
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3040 37 -     17186 tcca--------tttct-----------gctg--------c------aatgtgcctt-agactgcgtaatt
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      24943 43 -     32367 tctg--------tttca-----------actg-caattg-c------aagatatctt-agactgagtaatt
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276079 37 +  21539123 tctg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12246 37 +     48076 tccg--------tttct-----------gctg--------c------aatgtacctt-agaccgggtaatt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7381 37 -     28759 tccg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34936 37 +     44353 tctg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50306 37 -     71267 tccg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24364 37 -     33135 tccg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7642 43 +     11645 ttca--------tttct-----------actg--------ctataacaaaagacctt-agacttggtaatt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7650 43 -     19611 ttca--------tttct-----------actg--------ctataacaaaagacctt-agacttggtaatt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9170 37 +     28062 tccg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44464 37 -     91139 tccg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  21990 37 +     95584 tccg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21903 37 +    119600 tccg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11557 37 +     18648 tccg--------tttct-----------gctg--------g------aatgtacctt-agactgcatcatc
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11073 37 -     13885 tccg--------tttct-----------gctg--------c------agtgtatctt-agactgcataatt
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3162 37 -      8861 tccg--------tttct-----------gctg--------c------aatgtacctt-agactgcctcatc
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455551 37 + 189096842 TCCG--------TTTCT-----------GCTG--------C------AATGTACCTT-AGACTGCCTCATC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3074 37 +      8664 tccg--------tttct-----------gctg--------c------aatatacctt-agactgcctcatc
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    887 43 -      1607 tcta--------tgtga-----------ggtg-ttacac-c------aaaatatcct-aggctgagtagtt
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272188 43 +    496798 TCTA--------TTTCt-----------gctg--------ctaaaacaaaatatctt-agactgggtaatt
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29057 30 -     39886 tctg--------ttttt-----------gatg-ctataa-c------aaaatacact--------------
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 8
s Cavia_aperea.AVPZ01000300.1                              4997780 42 +  23392119 tctg--------t-tat-----------ggtg-ttatac-c------aaaatatcct-agattgagtagct
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001222 42 +  23407841 tctg--------t-tat-----------ggtg-ttatac-c------aaaatatcct-agattgagtagct
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64301 42 -     66877 tctg--------t-tat-----------ggtg-ttatac-c------aaaatatcct-agattgagtagct
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6472 37 -     12580 tctg--------tttct-----------gctg--------g------aatgtacctt-agactgcatcatc
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44530 37 +     53515 tctg--------tttct-----------gctg--------g------aatgtacctt-agactgcatcatc
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374302 10 -  26074798 TCCA--------TTTCT-----------G------------------------------------------
i Cebus_albifrons.Contig27                               C 0 I 9
s Cebus_olivaceus.k141_1404781                                9356 10 -     34880 TCCA--------TTTCT-----------G------------------------------------------
i Cebus_olivaceus.k141_1404781                           C 0 I 10
s Cebus_unicolor.k141_1654760                                68452 10 -     89041 TCCA--------TTTCT-----------G------------------------------------------
i Cebus_unicolor.k141_1654760                            C 0 I 10
s Cephalopachus_bancanus.k141_1689090                         4148 43 -      5494 tcta--------cttct-----------gctg--------ctaaaacaaaatatctt-agactgggtaatt
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                142659 37 -   4669795 TCCG--------TTTCT-----------GCTG--------C------AGCGTCCCTt-cgactgggtaatt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46398 37 +     47900 tccg--------tttct-----------gctg--------c------agcgtccctt-cgactgggtaatt
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1831 37 -     14410 tccg--------tttct-----------gctg--------c------agcgtccctt-cgactgggtaatt
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46215 37 -    148725 tccg--------tttct-----------gctg--------c------agcgtccctt-cgactgggtaatt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28491 37 -     40656 tctg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8450 37 +     20796 tctg--------tttct-----------gcta--------a------agtgtacctt-tgactgggtaatt
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13564 37 -     17524 tctg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29296 37 -     34525 tctg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13076 37 -     25376 tctg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365663 37 -  39242232 tctg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271390 37 +  21565898 tctg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33755 37 -     45857 tctg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28656 37 -     32606 tctg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4819 37 +      8499 tctg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27217 37 +     70610 tctg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24178 37 +     36323 tctg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32056 43 -     33796 TCTG--------GTTCT-----------Actg--------ctataacaaaagatctt-agatttggtaatt
i Cheirogaleus_major.k141_666340                         I 2 C 0
s Cheirogaleus_medius.k141_759766                             6552 43 -     15404 tcta--------gttct-----------actg--------ctataacaaaagatctt-agatttggtaatt
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10277 37 -     32913 tccg--------tttct-----------gctg--------c------aatgtgcctt-agactgtgtaatt
i Cheracebus_lucifer.k141_2312002                        I 3 C 0
s Cheracebus_lugens.k141_1179667                             20690 37 -     40346 tccg--------tttct-----------gctg--------c------aatgtgcctt-agactgggtaatt
i Cheracebus_lugens.k141_1179667                         I 3 C 0
s Cheracebus_regulus.k141_471822                             20945 37 +    216457 tccg--------tttct-----------gctg--------c------aatgtgcctt-agactggataatt
i Cheracebus_regulus.k141_471822                         I 3 C 0
s Cheracebus_torquatus.k141_890198                           20734 37 +     39636 tccg--------tttct-----------gctg--------c------aatgtgcctt-agactgggtaatt
i Cheracebus_torquatus.k141_890198                       I 3 C 0
s Chinchilla_lanigera.JH722012.1                           1240117 43 -   2543920 tctg--------tgtga-----------ggtg-ttatac-c------aaaatatcct-aggctgggtagtt
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            397 37 +      1057 ttag--------tttcc-----------gctg--------c------agtgtacctt-agacagcataatt
i Chiropotes_albinasus.k141_2628359                      I 3 C 0
s Chiropotes_israelita.k141_313004                           43804 37 -    112038 tccg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9355 37 +     34062 tccg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345079 37 +  18827391 tccg--------tttct-----------gctg--------c------agtgtacctt-tgcctgggtaatt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11618 37 -     44032 tccg--------tttct-----------gctg--------c------agtgtacctt-tgcctgggtaatt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306470 37 - 135778131 TCCG--------TTTCT-----------GCTG--------C------GGTGTACCTt-tgcctgggtaatt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             410875 37 -   2368649 TCCG--------TTTCT-----------GCTG--------C------AATGTACCtt-tgactgggtaatt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380759 37 - 200372422 tccg--------tttct-----------gctg--------c------aatgtacctt-tgactgggtaatt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4316 37 -     84244 tccg--------tttct-----------gctg--------c------aatgtacctt-tgactgggtaatt
i Colobus_polykomos.k141_906115                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46270  5 -     83289 TTTG--------T----------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646784 30 -   1526836 tcta--------tgt-g-----------gtta-ttgt-gac------aaaATACCCT-A------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 3 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19954 43 +     50838 tcta--------tgtga-----------ggtgtca-cac-c------aaaatatcct-aggctgagtagtt
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5690 43 +     36344 tctg--------tgtga-----------agtg-ttatac-c------aaaatatcct-agactgagtagtt
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29479 43 +     75252 tctg--------tgtaa-----------agtg-ttctac-c------aaaatatcct-aggctgagtagtt
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293955 43 +  12879189 AACA--------TTTCT-----------Actg--------ctgtaacaaaaccctgt-agacttggtaatt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100184 43 -    115145 tctg--------tgtga-----------ggtg-tgatac-t------aaaatatccc-aggctggctagtt
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18951962 43 -  37912305 tctg--------tttct-----------gctg-ctctaa-c------agaatacctt-gaatggaatatct
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6894 41 -     10735 --tg--------tttca-----------gctg-ctctaa-c------aaaatacctt-gaatggaatatct
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10609 12 +     14636 -----------------------------------------------------------GGTTGAGTACTT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33909  5 +    110024 TTGC--------T----------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15845  5 +     18970 TTGC--------T----------------------------------------------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Erythrocebus_patas.Contig38                               264608 37 +  21539334 tccg--------tttct-----------gctg--------c------agtgtacctt-tgcctgggtaatt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16171 43 -     24895 tcca--------tttct-----------actg--------ctataacaaaagacttt-agacttggtaatt
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43881 43 -     70999 tcca--------tttct-----------actg--------ctataacaaaagacttt-agacttggtaatt
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87851 43 +    112731 tcca--------tttct-----------actg--------ctataacaaaagacttt-agactaggtaatt
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44414 43 +     68309 tcca--------tttct-----------actg--------ctataacaaaagacttt-agacttggtaatt
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54738 43 -     65740 tcca--------tttct-----------actg--------ctataacaaaagacttt-agacttggtaatt
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25371 43 -     75513 tcca--------tttct-----------actg--------ctataacaaaagacttt-agacttggtaatt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49565 43 -     97555 tcca--------tttct-----------actg--------ctataacaaaagacttt-agacttggtaatt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6289 43 +     30972 tcca--------tttct-----------actg--------gtataacaaaagacttt-agacttggtaact
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44009 43 -     52037 tcca--------tttct-----------actg--------ctataacaaaagacttt-agacttggtaatt
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60412 43 -    111500 tcca--------tttct-----------actg--------ctataacaaaagacttt-agacttggtaatt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923334 43 -   3816255 tctg--------tatga-----------ggtg-ttacac-a------aaagtaccct-aggctgagtagtt
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2550 43 -     28519 tcta--------ttcct-----------gctg-ctataa-c------aaaatacctt-atactgggtagtt
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2691 43 -      6791 tctg--------tttcg-----------gctg-ctataa-c------caaatgcctt-agactgggtcatt
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3586045                              19301 37 -     19819 tcca--------tttct-----------gctg--------c------aatgtacctt-agactaggtaatt
i Gorilla_beringei.k141_3586045                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                257722 37 - 186649187 tcca--------tttct-----------gctg--------c------aatgtacctt-agactaggtaatt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3756 43 -     78134 tctg--------ttttg-----------gctg-ctataa-c------caaatgcctt-agattgggtcatt
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16096 43 -     40692 ttca--------tttct-----------actg--------ctgtaacaaaagacctt-agacttggtaatt
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37495 43 +     49394 ttca--------tttct-----------actg--------ctgtaacaaaagacctt-agacttggtaatt
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62366 43 -     66874 ttca--------tttct-----------actg--------ctgtaacaaaagacctt-agacttggtaatt
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11237 43 -     42923 tcca--------tttct-----------actg--------ctgtaacaaaagacctt-agacttggtaatt
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18239 43 -     53142 tcca--------tttct-----------actg--------ctgtaacaaaagacctt-agatttggtaatt
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933756 43 -  22651954 tctg--------tgtga-----------ggtg-ttatac-a------gaaataccct-aggctgagtagtt
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    144193 37 -    630532 tcca--------tttct-----------gctg--------c------aatgtgcctt-agactgggtaatt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73171 41 +    143317 tctg--------t-tat-----------agtg-ttatac-c------aaaatatcct-ag-ttgagtagtt
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7234 37 +     12352 tcca--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14418 37 +     55766 tcca--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054018 37 + 191637585 tcca--------tttct-----------gctg--------c------aatgtacctt-agactgggtaagt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802896 37 +  11177569 tcca--------tttct-----------gctg--------c------aatgtacctt-agactgggtaagt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8510 43 -    135385 gctt--------tgtga-----------gctg-ttatac-c------aaaataccct-aggctgagtagct
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388224 43 +   7955117 tctg--------tttca-----------gctt-ctatac-c------aaaatacctt-agaatgggtaatt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3784 43 +     11955 tcca--------tttct-----------actg--------ctataacaaaagacctt-agacttggtaaac
i Indri_indri.k141_2415743                               C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241501  5 +   9596543 tttt--------t----------------------------------------------------------
i Jaculus_jaculus.JH725527.1                             I 74 C 0
s Lagothrix_lagothricha.k141_246028                          44630 37 +    110728 tcca--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14760893 43 +  30322482 tcca--------tttct-----------actg--------ctgtaacaaaagacctt-agacttggtaatt
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5533 37 -     13097 ttcg--------tttcc-----------gctg--------c------agtgtacctt-agacggcataatt
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5287 37 +      5940 ttcg--------tttcc-----------gctg--------c------agtgtacctt-agacggcataatt
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5110 37 -      5717 ttcg--------tttcc-----------gctg--------c------agtgtacctt-agacggcataatt
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      263 37 +      8855 tcca--------tttct-----------gctg--------c------aatgtacctt-agactgcataatt
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5065 37 -     13645 tcca--------tttct-----------gctg--------c------aatgtacctt-agactgcataatt
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10409 43 +     29618 tcta--------tttct-----------actg--------ctataacaaaagacctc-agacttggtaatt
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10405 43 +     31569 tcta--------tttct-----------actg--------ctataacaaaagacctc-agacttggtaatt
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10415 43 +     24756 tcta--------tttct-----------actg--------ctataacaaaagacatc-agacttggtaatt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10415 43 +     16388 tcta--------tttct-----------actg--------ctataacaaaagacctc-agacttggtaatt
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               335541 37 -   1826925 tcca--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              46933 37 -     61512 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374595 37 -  60120075 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26863 37 +     30207 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1701 37 -      5035 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26816 37 +     30527 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 37992 37 -     50087 tcca--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47736 37 +     51645 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416939 37 - 187317192 TCCG--------TTTCT-----------GCTG--------C------AGTGTCCCTt-cgactgggtaatt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401169 37 +  25927173 TCCG--------TTTCT-----------GCTG--------C------AGTGTCCCTt-cgactgggtaatt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50341 37 -     62418 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2872 37 +     14901 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46813 37 +     59329 tccg--------tttct-----------gctg--------c------cgtgtccctt-cgactgggtaatt
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272721 37 +    668171 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1353 37 -      5049 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4519 37 +     17132 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324009 37 +  24302211 tccg--------tttct-----------gctg--------c------agcgtccctt-cgactgggtaatt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358840 37 -    752769 tccg--------tttct-----------gctg--------c------agcgtccctt-cgactgggtaatt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502437 43 +  40650429 tctg--------tttca-----------gctt-ctatac-c------aaaatacttt-agaatgggtaatt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52269  5 -    140813 TTGG--------C----------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mico_argentatus.k141_582562                                11655 37 +     17804 tccg--------tttct-----------gctg--------g------aatgtacctt-agactgcatcatc
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12155 37 -     12984 tccg--------tttct-----------gctg--------g------aatgtacctt-agactgcatcatc
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20474 37 -     26561 tccg--------tttct-----------gctg--------g------aatgtacctt-agactgcatcatc
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986247 43 +  93316391 TCCA--------TTTct-----------actg--------ctataacaaaagatCTT-AGATTTGGTAATT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965329  5 +  27267610 TTGC--------T----------------------------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24107 37 -     27822 tctg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54022 43 -     62432 tcca--------tttct-----------actg--------ctataacaaaagatctt-agatttggtaatt
i Mirza_zaza.k141_766280                                 C 0 C 0
s Mus_caroli.LT608237.1                                   35596508  5 + 120012414 CCGG--------C----------------------------------------------------------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41689681  5 + 129401213 CCAG--------C----------------------------------------------------------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58217987  5 +  89631738 CCGG--------C----------------------------------------------------------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39498966  5 + 130317789 CCGA--------C----------------------------------------------------------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85594 43 -     86153 tctg--------tttca-----------gctg-ccataa-c------taaataccat-agattgggcaatt
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64475 43 +     67721 TCTA--------TGTGA-----------GGCA-TTACAC-C------AAAATATCCT-AGGCTGAGTGGTT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nannospalax_galili.KL204047.1                             948151  5 +   3037898 TTTG--------T----------------------------------------------------------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              30884 37 +     34575 tccg--------tttct-----------gctg--------c------agtgtacctt-ccactgggtaatt
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55124 37 -    132029 tcca--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11219 37 -     16345 tcca--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17104 37 +     22201 tcca--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415325 37 -  22158432 tcca--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27502 37 -     54323 tcca--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Ochotona_princeps.JH802162.1                             2558269 51 -   3988456 taag--------aatcaCCACCACTTTCC----CTGGAA-A------TAAAACCCTT-ATTTTGGGTACTG
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056565 42 -  11899542 tcta--------tgtga-----------ggta-ttacac-c------aaaatatcct-aggctgagta-tt
i Octodon_degus.JH651603.1                               C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95948  5 -    140218 TTGC--------T----------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6519 13 -     41509 TCGGTATGTATGT----------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Pan_paniscus.AJFE02001033.1                                  467 37 +      1169 TCCA--------TTTCT-----------GCTG--------C------AATGTAcctt-agactaggtaatt
i Pan_paniscus.AJFE02001033.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1475759 37 - 189151597 TCCA--------TTTCT-----------GCTG--------C------AATGTAcctt-agactaggtaatt
i Pan_troglodytes.CM009242.2                             I 19 C 0
s Papio_anubis.CM001495.2                                   245018 37 - 183742232 TCCG--------TTTCT-----------GCTG--------C------AGTGTCCCTt-caactgggtaatt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11303 37 +     21308 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294046 37 -  20919399 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23943 37 -     27687 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     622 37 +     10553 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   582 37 -     10386 tccg--------tttct-----------gctg--------c------agtgtccctt-cgactgggtaatt
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3304 42 +      9367 tctg--------tttca-----------aatg-ctctaa-c------aaaatacctt-gaatggaga-att
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249733  5 +  18517816 TTGG--------T----------------------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33327 42 -     56120 tctg--------tgtgg-----------ggtg-ttatac-a-------aaataccct-acactgaggagtt
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                            4266 37 +     55023 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3788 37 -     89929 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4378 37 +     40849 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256053 37 +  14605196 TCCG--------TTTCT-----------GCTG--------C------AGTGTACCTT-CGACTGGGTAATT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 55
s Pithecia_albicans.k141_1239476                             66172 37 +    207309 tctg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7260 37 -     25401 tctg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33008 37 +     58159 tctg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33284 37 +     63561 tctg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33044 37 +     51148 tctg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558014 37 -   4542175 tctg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33028 37 +     51125 tctg--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9446 37 +     39866 tctg--------tttct-----------gctg--------c------aatgtgcctt-agactgggtaatt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4528 37 -      9282 tccg--------tttct-----------gctg--------c------aatgtgcctt-agactgggtaatt
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43932 37 -     87950 tccg--------tttct-----------gctg--------c------aatgtgcctt-agactgggtaatt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44326 37 -     88961 tccg--------tttct-----------gctg--------c------aatgtgcctt-agactgggtaatt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9024 37 -     39403 tccg--------tttct-----------gctg--------c------aatgtgcctt-agactgggtaatt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          43975 37 +     87928 tccg--------tttct-----------gctg--------c------aatgtgcctt-agactgggtaatt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9023 37 -     60166 tccg--------tttct-----------gctg--------c------aatgtgcctt-agactgggtaatt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15960 37 -     67232 tccg--------tttct-----------gctg--------c------aatgtgcctt-agactgggtaatt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43876 37 -     90634 tccg--------tttct-----------gctg--------c------aatgtgcctt-agactgggtaatt
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45343 37 +     89403 tccg--------tttct-----------gctg--------c------aatgtgcctt-agactgggtaatt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   180878 37 - 189387572 TCCA--------TTTCT-----------GCTG--------C------AATGTACCtt-agcctgggtaatt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195618 37 -   9816681 tcca--------tttct-----------gctg--------c------aatgtacctt-agcctgggtaatt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29466 37 +     69807 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatg
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46647 37 -     80239 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatg
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984041 43 +   4620579 TCCA--------TTTCT-----------ACTG--------CTGTAACAAAAGACCTt-agacttggtaatt
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567536 43 -   2598838 TCCA--------TTtct-----------actg--------ctataacaaaagacctt-agacttggtaatt
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5174 43 -      7103 tcca--------tttct-----------agtg--------ctataacaaaagacctt-agacttggtaatt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5771 43 -     11706 tcca--------tttct-----------actg--------ctataacaaaagacctt-agacttggtaatt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9508 43 -     30655 tcca--------tttct-----------actg--------ctataacaaaagacctt-agacttggtaatt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35822 43 +     46564 tcca--------tttct-----------actg--------ctataacaaaagacctt-agacttggtaatt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96101 43 -     98465 tcca--------tttct-----------agtg--------ctataacaaaagacctt-agacttggtaatt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9740 43 +     35169 tgca--------tttct-----------agtg--------ctataacaaaagacctt-agacttggtaatt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39792  5 +     52041 TTGG--------T----------------------------------------------------------
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28833 37 +     91421 tccg--------tttct-----------gctg--------c------agtgtacctt-caactgggtaatt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155385 37 -   7812017 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9690 37 +     72585 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3311 23 +      7119 -----------------------------------------------agtgtgcctt-tgactgggcaatt
i Rhinopithecus_bieti.k119_778604                        I 29 C 0
s Rattus_norvegicus.chr16                                 37024694  5 -  90668790 CTGG--------C----------------------------------------------------------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104123967 37 + 195417433 TCCG--------TTTCT-----------GCTG--------C------AGTGTGCCTT-cgactgggcaatt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238153 23 -   7961872 -----------------------------------------------agtgtgcctt-tgactgggcaatt
i Rhinopithecus_strykeri.ctg102                          I 29 C 0
s Saguinus_bicolor.k141_2012906                                397 37 -      1130 ttag--------tttcc-----------gctg--------c------agtgtacctt-agacagcataatt
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5299 37 +      6077 ttcc--------tttcc-----------gctg--------c------agtgtacctt-agacggcataatt
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5393 37 +      5971 ttcg--------tttct-----------gctg--------c------agtgtacctt-agacggcataatt
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5310 37 +      5932 ttcg--------tttct-----------gctg--------c------agtgtacctt-agacggcataatt
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3655 37 -      4390 ttcg--------tttct-----------gctg--------c------agtgtacctt-agacggcataatt
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393412 37 - 209938924 ttag--------tttcc-----------gctg--------c------agtgtacctt-agacggcataatt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5258 37 +      5979 ttcg--------tttct-----------gctg--------c------agtgtacctt-agacggcataatt
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1828 37 -     22275 ttca--------tttcc-----------gctg--------c------agtgtacctt-agacggcataatt
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110425 37 + 121099817 TCTG--------TATCT-----------GCTG--------C------AATGTACCTT-AGATtgtgtaatt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       31992 37 -     47369 tctg--------tatct-----------gctg--------c------aatgtacctt-agattgtgtaatt
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32378 37 -     79414 tctg--------tatct-----------gctg--------c------aatgtacctt-agattgtgtaatt
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29069 37 -     34454 tctg--------tatct-----------gctg--------c------aatgtacctt-agattgtgtaatt
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16470 37 -     22428 tctg--------tatct-----------gctg--------c------aatgtacctt-agattgtgtaatt
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31624 37 -     47109 tctg--------tatct-----------gctg--------c------aatgtacctt-agattgtgtaatt
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239676 10 +   5703754 TCCA--------TTTCT-----------G------------------------------------------
i Sapajus_apella.ctg103                                  C 0 I 10
s Sapajus_macrocephalus.k141_796559                           9266 10 +     21866 TCCA--------TTTCT-----------G------------------------------------------
i Sapajus_macrocephalus.k141_796559                      C 0 I 10
s Semnopithecus_entellus.k141_583282                           272 37 +     11297 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30665 37 +     58920 tccg--------tttct-----------gctg--------c------agtgtacctt-tgactgggtaatt
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17163 37 -     45317 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24821 37 -     42441 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27497 37 -     29113 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30574 37 -     48123 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51519  5 +     77746 TTGG--------T----------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869802 43 +   3870691 tctg--------tttta-----------gctt-ttatac-c------aaaatacctt-agaatgggtaatt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392590 37 +   1523678 tcca--------tttct-----------gctg--------c------aatgtacctt-agactgggtaatt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2101 43 +      9917 tcta--------tttct-----------gctg--------ctaaaacaaaatatctt-agactgggtaatt
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8899 43 +     20590 tcta--------tttct-----------gctg--------ctaaaacaaaatatctt-agactgggtaatt
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354827 37 - 186847797 TCCG--------TTTCT-----------GCTG--------C------AGTGTCCCTt-cgactgggtaatt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25484 43 -     33621 tttg--------tgtga-----------gatg-ttat-gcc------aaaatactct-tggctgagtagtt
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22599 13 +     26378 ----------------------------------------------------------cgactgggtaatt
i Trachypithecus_auratus.k141_1189070                    I 39 C 0
s Trachypithecus_crepusculus.k141_539312                     35374 37 -     78344 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21924 13 +     25722 ----------------------------------------------------------cgactgggtaatt
i Trachypithecus_cristatus.k141_180416                   I 39 C 0
s Trachypithecus_francoisi.k141_1453105                      30330 37 -     62838 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30339 17 +     46913 -----------------------------------------------------cctt-cgactgggtaatt
i Trachypithecus_geei.k141_1001272                       I 35 C 0
s Trachypithecus_germaini.k141_57262                         11082 13 -     28527 ----------------------------------------------------------cgactgggtaatt
i Trachypithecus_germaini.k141_57262                     I 39 C 0
s Trachypithecus_hatinhensis.k141_31479                      32265 37 -     64340 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30303 37 -     63452 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11750 37 +     22490 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5140 15 -      6147 -------------------------------------------------------tt-cgactggggaatt
i Trachypithecus_melamera.k141_591572                    I 37 C 0
s Trachypithecus_obscurus.k141_848057                        12051 17 -     13050 -----------------------------------------------------cctt-cgactgggtaatt
i Trachypithecus_obscurus.k141_848057                    I 35 C 0
s Trachypithecus_phayrei.ctg124                             257193 37 -   6242583 tccg--------tttct-----------gctg--------c------agtgtacctt-cgactgggtaatt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3309 17 +     19340 -----------------------------------------------------cctt-cgactgggtaatt
i Trachypithecus_pileatus.k141_2622778                   I 35 C 0
s Tupaia_chinensis.KB320699.1                              1836530 43 -   4065304 TCCA--------TTTTC-----------Actg-ctataa-c------ccaacccctt-agactggataatt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10552 43 -     70247 tcca--------ttttc-----------actg-ctataa-c------ctaatccctt-agactgggtaatt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  26694 43 -     30710 tcca--------tttct-----------actg--------ctataacaaaagacctt-agacttggtaatt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25601 43 -    147434 tcca--------tttct-----------actg--------ctattacaaaagacctt-agacttggtaatt
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175557 43 -    224448 tctg--------tttca-----------actg-ctataa-c------aaaatacttt-agaatgagtaatt
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1375  5 -      1899 TTTT--------T----------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316  3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042  0 - 224834208 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8459 2 +     36723 ta
s Allenopithecus_nigroviridis.k141_3755588                   49614 2 +     53615 ta
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1641 2 +     13857 ta
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18196 2 -     21945 ta
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19881 2 +     32033 ta
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73651 2 -     84148 ta
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45890 2 -     78289 ta
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45329 2 +     55831 ta
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43779 2 -     64179 ta
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            887 2 -      3959 ta
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42404 2 +     45454 ta
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48053 2 +     70886 ta
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10226 2 +     30854 ta
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34360 2 +     42133 ta
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2617 2 +     17741 ta
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3242 2 -     15923 ta
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673524 2 +   5030052 ta
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3518 2 -     16391 ta
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3077 2 -     17186 ta
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      24986 2 -     32367 ta
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276116 2 +  21539123 ta
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12283 2 +     48076 tg
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7418 2 -     28759 tg
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34973 2 +     44353 ta
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50343 2 -     71267 tg
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24401 2 -     33135 tg
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7685 2 +     11645 ta
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7693 2 -     19611 ta
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9207 2 +     28062 ta
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44501 2 -     91139 ta
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22027 2 +     95584 ta
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21940 2 +    119600 ta
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11594 2 +     18648 tg
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11110 2 -     13885 ta
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3199 2 -      8861 tg
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455588 2 + 189096842 TG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3111 2 +      8664 tg
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    930 2 -      1607 ta
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272231 2 +    496798 ta
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29095 2 -     39886 ta
i Castor_canadensis.CasCan_scaffold_39952                I 8 C 0
s Cavia_aperea.AVPZ01000300.1                              4997822 2 +  23392119 ta
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001264 2 +  23407841 ta
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64343 2 -     66877 ta
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6509 2 -     12580 tg
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44567 2 +     53515 tg
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374321 2 -  26074798 ca
i Cebus_albifrons.Contig27                               I 9 C 0
s Cebus_olivaceus.k141_1404781                                9376 2 -     34880 ca
i Cebus_olivaceus.k141_1404781                           I 10 C 0
s Cebus_unicolor.k141_1654760                                68472 2 -     89041 ca
i Cebus_unicolor.k141_1654760                            I 10 C 0
s Cephalopachus_bancanus.k141_1689090                         4191 2 -      5494 ta
i Cephalopachus_bancanus.k141_1689090                    C 0 I 9
s Cercocebus_atys.KQ010504.1                                142696 2 -   4669795 ta
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46435 2 +     47900 ta
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1868 2 -     14410 ta
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46252 2 -    148725 ta
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28528 2 -     40656 ta
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8487 2 +     20796 ta
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13601 2 -     17524 ta
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29333 2 -     34525 ta
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13113 2 -     25376 ta
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365700 2 -  39242232 ta
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271427 2 +  21565898 ta
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33792 2 -     45857 ta
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28693 2 -     32606 ta
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4856 2 +      8499 ta
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27254 2 +     70610 ta
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24215 2 +     36323 ta
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32099 2 -     33796 ta
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6595 2 -     15404 ta
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10314 2 -     32913 ta
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20727 2 -     40346 ta
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20982 2 +    216457 ta
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20771 2 +     39636 ta
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240160 2 -   2543920 ta
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            434 2 +      1057 ta
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43841 2 -    112038 ta
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9392 2 +     34062 ta
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345116 2 +  18827391 ta
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11655 2 -     44032 ta
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306507 2 - 135778131 ta
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             410912 2 -   2368649 ta
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380796 2 - 200372422 ta
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4353 2 -     84244 ta
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19997 2 +     50838 ta
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5733 2 +     36344 ta
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29522 2 +     75252 ta
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        293998 2 +  12879189 ta
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100227 2 -    115145 ta
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952005 2 -  37912305 ta
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6935 2 -     10735 ta
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10621 2 +     14636 TA
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Erythrocebus_patas.Contig38                               264645 2 +  21539334 ta
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16214 2 -     24895 ta
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43924 2 -     70999 ta
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87894 2 +    112731 ta
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44457 2 +     68309 ta
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54781 2 -     65740 ta
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25414 2 -     75513 ta
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49608 2 -     97555 ta
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6332 2 +     30972 ta
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44052 2 -     52037 ta
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60455 2 -    111500 ta
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923377 2 -   3816255 ta
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2593 2 -     28519 ta
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2734 2 -      6791 ta
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3586045                              19338 2 -     19819 ta
i Gorilla_beringei.k141_3586045                          C 0 I 68
s Gorilla_gorilla.LT578341.1                                257759 2 - 186649187 ta
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3799 2 -     78134 ta
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16139 2 -     40692 ta
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37538 2 +     49394 ta
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62409 2 -     66874 ta
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11280 2 -     42923 ta
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18282 2 -     53142 ta
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933799 2 -  22651954 ta
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    144230 2 -    630532 ta
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73212 2 +    143317 ta
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7271 2 +     12352 ta
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14455 2 +     55766 ta
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054055 2 + 191637585 ta
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802933 2 +  11177569 ta
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8553 2 -    135385 ta
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388267 2 +   7955117 tg
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3827 2 +     11955 ta
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44667 2 +    110728 ta
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14760936 2 +  30322482 ta
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5570 2 -     13097 ta
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5324 2 +      5940 ta
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5147 2 -      5717 ta
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      300 2 +      8855 ta
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5102 2 -     13645 tg
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10452 2 +     29618 ta
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10448 2 +     31569 ta
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10458 2 +     24756 ta
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10458 2 +     16388 ta
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               335578 2 -   1826925 ta
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              46970 2 -     61512 ta
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374632 2 -  60120075 ta
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26900 2 +     30207 ta
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1738 2 -      5035 ta
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26853 2 +     30527 ta
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38029 2 -     50087 ta
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47773 2 +     51645 ta
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416976 2 - 187317192 ta
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401206 2 +  25927173 ta
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50378 2 -     62418 ta
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2909 2 +     14901 ta
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46850 2 +     59329 ta
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272758 2 +    668171 ta
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1390 2 -      5049 ta
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4556 2 +     17132 ta
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324046 2 +  24302211 ta
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358877 2 -    752769 ta
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502480 2 +  40650429 tg
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_582562                                11692 2 +     17804 tg
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12192 2 -     12984 tg
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20511 2 -     26561 tg
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986290 2 +  93316391 TA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24144 2 -     27822 ta
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54065 2 -     62432 ta
i Mirza_zaza.k141_766280                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85637 2 -     86153 ta
i Muscardinus_avellanarius.MusAve_scaffold_12866         C 0 I 232
s Myocastor_coypus.MyoCoy_scaffold_15261                     64518 2 +     67721 TA
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              30921 2 +     34575 ta
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55161 2 -    132029 ta
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11256 2 -     16345 ta
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17141 2 +     22201 ta
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415362 2 -  22158432 ta
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27539 2 -     54323 ta
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Ochotona_princeps.JH802162.1                             2558320 2 -   3988456 TC
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056607 2 -  11899542 ta
i Octodon_degus.JH651603.1                               C 0 C 0
s Pan_paniscus.AJFE02001033.1                                  504 2 +      1169 ta
i Pan_paniscus.AJFE02001033.1                            C 0 I 522
s Pan_troglodytes.CM009242.2                               1475796 2 - 189151597 ta
i Pan_troglodytes.CM009242.2                             C 0 I 161
s Papio_anubis.CM001495.2                                   245055 2 - 183742232 ta
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11340 2 +     21308 ta
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294083 2 -  20919399 ta
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23980 2 -     27687 ta
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     659 2 +     10553 ta
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   619 2 -     10386 ta
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3346 2 +      9367 ta
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33369 2 -     56120 ca
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                            4303 2 +     55023 ta
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3825 2 -     89929 ta
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4415 2 +     40849 ta
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256145 2 +  14605196 ta
i Piliocolobus_tephrosceles.PDMG02000141.1               I 55 C 0
s Pithecia_albicans.k141_1239476                             66209 2 +    207309 ta
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7297 2 -     25401 ta
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33045 2 +     58159 ta
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33321 2 +     63561 ta
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33081 2 +     51148 ta
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558051 2 -   4542175 ta
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33065 2 +     51125 ta
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9483 2 +     39866 ta
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4565 2 -      9282 ta
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43969 2 -     87950 ta
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44363 2 -     88961 ta
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9061 2 -     39403 ta
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44012 2 +     87928 ta
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9060 2 -     60166 ta
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15997 2 -     67232 ta
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43913 2 -     90634 ta
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45380 2 +     89403 ta
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   180915 2 - 189387572 ta
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195655 2 -   9816681 ta
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29503 2 +     69807 ta
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46684 2 -     80239 ta
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984084 2 +   4620579 ta
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567579 2 -   2598838 ta
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5217 2 -      7103 ta
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5814 2 -     11706 ta
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9551 2 -     30655 ta
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35865 2 +     46564 ta
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96144 2 -     98465 ta
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9783 2 +     35169 ta
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28870 2 +     91421 ta
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155422 2 -   7812017 ta
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9727 2 +     72585 ta
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3334 2 +      7119 ta
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124004 2 + 195417433 ta
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238176 2 -   7961872 ta
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2012906                                434 2 -      1130 ta
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5336 2 +      6077 ta
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5430 2 +      5971 ta
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5347 2 +      5932 ta
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3692 2 -      4390 ta
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393449 2 - 209938924 ta
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5295 2 +      5979 ta
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1865 2 -     22275 ta
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110462 2 + 121099817 ta
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32029 2 -     47369 ta
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32415 2 -     79414 ta
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29106 2 -     34454 ta
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16507 2 -     22428 ta
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31661 2 -     47109 ta
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239696 2 +   5703754 ca
i Sapajus_apella.ctg103                                  I 10 C 0
s Sapajus_macrocephalus.k141_796559                           9286 2 +     21866 ca
i Sapajus_macrocephalus.k141_796559                      I 10 C 0
s Semnopithecus_entellus.k141_583282                           309 2 +     11297 ta
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30702 2 +     58920 ta
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17200 2 -     45317 ta
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24858 2 -     42441 ta
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27534 2 -     29113 ta
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30611 2 -     48123 ta
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869845 2 +   3870691 tg
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392627 2 +   1523678 ta
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2144 2 +      9917 ta
i Tarsius_lariang.k141_1733899                           C 0 I 9
s Tarsius_wallacei.k141_226975                                8942 2 +     20590 ta
i Tarsius_wallacei.k141_226975                           C 0 I 9
s Theropithecus_gelada.CM009954.1                           354864 2 - 186847797 ta
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25527 2 -     33621 ca
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22612 2 +     26378 ta
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35411 2 -     78344 ta
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21937 2 +     25722 ta
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30367 2 -     62838 ta
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30356 2 +     46913 ta
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11095 2 -     28527 ta
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32302 2 -     64340 ta
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30340 2 -     63452 ta
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11787 2 +     22490 ta
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5155 2 -      6147 ta
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12068 2 -     13050 ta
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257230 2 -   6242583 ta
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3326 2 +     19340 ta
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836573 2 -   4065304 ta
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10595 2 -     70247 ta
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  26737 2 -     30710 ta
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25644 2 -    147434 ta
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175600 2 -    224448 ta
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156 0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380 0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524 0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699 0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797 0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738 0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532 0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953 0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316 3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971 0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992 0 +  89631738 C
e Mus_musculus.chr8                                       41689686 0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513 0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334 0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274 0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506 0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850 0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914 0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    646814 0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042 0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275 0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536 2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700 0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8461 25 +     36723 taaa-----acaacagaa-a---------tgtatt--gctag
s Allenopithecus_nigroviridis.k141_3755588                   49616 25 +     53615 taaa-----acaacagaa-a---------tgcatt--gctag
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1643 25 +     13857 taaa-----acaacagaa-a---------tgcatt--gctag
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18198 25 -     21945 taaa-----acaacagaa-a---------tgcatt--gctag
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19883 25 +     32033 taaa-----acaacagaa-a---------tgcatt--gctag
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73653 25 -     84148 taaa-----acagcagaa-a---------tttatt--gctaa
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45892 25 -     78289 taaa-----acagcagaa-a---------tttatt--gctag
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45331 25 +     55831 taaa-----acagcagaa-a---------tttatt--gctag
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43781 25 -     64179 taaa-----acagcagaa-a---------tttatt--gctag
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            889 25 -      3959 taaa-----acagcagaa-a---------tttatt--gctag
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42406 25 +     45454 taaa-----acagcagaa-a---------tttatt--gctag
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48055 25 +     70886 taaa-----acagcagaa-a---------tttatt--gctag
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10228 25 +     30854 taaa-----acagcagaa-a---------tttatt--gctag
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34362 25 +     42133 taaa-----acagcagaa-a---------tttatt--gctag
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2619 25 +     17741 taaa-----acaacagaa-a---------tttatt--gctag
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3244 25 -     15923 taaa-----acaacagaa-a---------tttatt--gctag
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673526 25 +   5030052 taaa-----acaacagaa-a---------tttatt--gctag
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3520 25 -     16391 taaa-----acaacagaa-a---------tttatt--gctag
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3079 25 -     17186 taaa-----acaacagaa-a---------tttatt--gctag
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      24988 24 -     32367 taaa------caacagaa-a---------tttatt--gctca
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 405
s Ateles_geoffroyi_b.tarseq_1536                               276118 25 +  21539123 taaa-----acagcagaa-a---------tttatt--gctag
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12285 25 +     48076 taaa-----acagcagaa-a---------tttatt--gctag
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7420 25 -     28759 taaa-----acagcagaa-a---------tttatt--gctag
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              34975 25 +     44353 taaa-----acagcagaa-a---------tttatt--gctag
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50345 25 -     71267 taaa-----acagcagaa-a---------tttatt--gctag
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24403 25 -     33135 taaa-----acagcagaa-a---------tttatt--gctag
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7687 23 +     11645 t-aa------caacacaa-a---------tttatc--actaa
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7695 23 -     19611 t-aa------caacacaa-a---------tttatc--actaa
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9209 25 +     28062 tgaa-----acaacagga-a---------tttatt--gctag
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44503 25 -     91139 tgaa-----acaacagga-a---------tttatt--gctag
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22029 25 +     95584 tgaa-----acaacagga-a---------tttatt--gctag
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21942 25 +    119600 tgaa-----acaacagga-a---------tttatt--gctag
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11596 24 +     18648 taaa-----acaacagaa-a---------cttatt--g-aag
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11112 23 -     13885 taaa-----acaa-agaa-a---------cttatt--g-tag
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3201 24 -      8861 taaa-----acaacagaa-a---------cttatt--g-aag
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455590 24 + 189096842 TAAA-----ACAACAGAA-A---------CTTATT--G-AAG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3113 23 +      8664 taaa-----acaaca-aa-a---------cttatt--g-aag
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    932 24 -      1607 taaa------catcagaa-a---------tgtgta--gttca
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272233  9 +    496798 taaa------caacg---------------------------
i Carlito_syrichta.NW_007259797.1                        C 0 I 9
s Castor_canadensis.CasCan_scaffold_39952                    29097 24 -     39886 taaa------caacagaa-c---------tttatc--agtca
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997824 19 +  23392119 taaa------cgccagaa-a---------t-------gttca
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001266 19 +  23407841 taaa------cgccagaa-a---------t-------gttca
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64345 19 -     66877 taaa------cgccagaa-a---------t-------gttca
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6511 24 -     12580 taaa-----acaacagaa-a---------cttatt--g-aag
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44569 24 +     53515 taaa-----acaacagaa-a---------cttatt--g-aag
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374323 25 -  26074798 taaa-----acaacagga-a---------tttatt--gctag
i Cebus_albifrons.Contig27                               C 0 T 1833
s Cebus_olivaceus.k141_1404781                                9378 25 -     34880 taaa-----acaacagga-a---------tttatt--gctag
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68474 25 -     89041 taaa-----acaacagga-a---------tttatt--gctag
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4202  9 -      5494 -------------------------------tatt--gctgg
i Cephalopachus_bancanus.k141_1689090                    I 9 C 0
s Cercocebus_atys.KQ010504.1                                142698 25 -   4669795 taaa-----acaacagaa-a---------tgcatt--gcTAG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46437 25 +     47900 taaa-----acaacagaa-a---------tgcatt--gcgag
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1870 25 -     14410 taaa-----acaacagaa-a---------tgcatt--gctag
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46254 25 -    148725 taaa-----acaacagaa-a---------tgcatt--gcgag
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28530 25 -     40656 tgaa-----acaacagaa-a---------tgcatt--gctag
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8489 25 +     20796 taaa-----acaacagaa-a---------tgcatt--gctag
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13603 25 -     17524 taaa-----acaacagaa-a---------tgcatt--gctag
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29335 25 -     34525 taaa-----acaacagaa-a---------tgcatt--gctag
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13115 25 -     25376 taaa-----acaacagaa-a---------tgcatt--gctag
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365702 25 -  39242232 taaa-----acaacagaa-a---------tgcatt--gctag
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271429 25 +  21565898 taaa-----acagcagaa-a---------tgcatt--gctag
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33794 25 -     45857 taaa-----acatcagaa-g---------tgcatt--gatag
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28695 25 -     32606 taaa-----acaacagaa-a---------tgcatt--gctag
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4858 25 +      8499 taaa-----acaacagaa-a---------tgcatt--gctag
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27256 25 +     70610 taaa-----acaacagaa-a---------tgcatt--gctag
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24217 25 +     36323 taaa-----acaacagaa-a---------tgcatt--gctag
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32101 23 -     33796 t-aa------caacacaa-a---------tttatc--actaa
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6597 23 -     15404 t-ag------caacacaa-a---------tttatc--actaa
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10316 25 -     32913 tgaa-----acagcagga-a---------tttgtt--gctgg
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20729 25 -     40346 tgaa-----acagcagga-a---------tttgtt--gctgg
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             20984 25 +    216457 tgaa-----acagcagga-a---------tttgtt--gctgg
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20773 25 +     39636 tgaa-----acagcagga-a---------tttgtt--gctgg
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240162 24 -   2543920 taaa------catcagaa-a---------tgtatt--gttca
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            436 30 +      1057 cagaacagaacaatagaa-a---------ctcact--gctgg
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43843 25 -    112038 tgaa-----accacagga-a---------tttatt--gctag
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9394 25 +     34062 tgaa-----accacagga-c---------tttatt--gctag
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345118 25 +  18827391 taaa-----acaacagaa-a---------tgcatt--gctag
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11657 25 -     44032 taaa-----acaacagaa-a---------tgcatt--gctag
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306509 20 - 135778131 taaa-----acaacagaa-a--------------t--gctaG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             410914 27 -   2368649 taaa-----acaacagaa-a---------tgcattttgcTAG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380798 25 - 200372422 taaa-----acaacagaa-a---------tgcatt--gctag
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4355 25 -     84244 taaa-----acaacagaa-a---------tgcatt--gctag
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646814 15 -   1526836 ---------------CAA-A---------CAtatt--gctca
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  19999 24 +     50838 tgaa------catcagaa-a---------tgtgtt--gttca
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5735 24 +     36344 taaa------taccagaa-a---------tgtatt--gttca
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29524 19 +     75252 taga------caccagaa-a---------t-------gttct
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294000 24 +  12879189 taaa------caacacaa-a---------cttatc--actaa
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100229 24 -    115145 taaa------catgagaa-a---------ggtatt--gttca
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952007 24 -  37912305 taag------caatagaa-a---------tttata--gttca
i Dipodomys_ordii.KN672350.1                             C 0 I 2
s Dipodomys_stephensi.DipSte_scaffold_89095                   6937 24 -     10735 taag------caatagaa-a---------tttata--gttca
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 2
s Dolichotis_patagonum.DolPat_scaffold_80628                 10623 19 +     14636 TAAA------TGCCAGAA-A---------T-------GTTCA
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Erythrocebus_patas.Contig38                               264647 25 +  21539334 taaa-----acaacagaa-a---------tgcatt--gctag
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16216 23 -     24895 t-aa------caacacaa-a---------tttatc--actaa
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43926 23 -     70999 t-aa------caacacaa-a---------tttatc--actaa
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87896 23 +    112731 t-aa------caacacag-a---------tttatc--actaa
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44459 23 +     68309 t-aa------caacacaa-a---------tttatc--actaa
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54783 23 -     65740 t-aa------caacacaa-a---------tttatc--actaa
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25416 23 -     75513 t-aa------caacacaa-a---------tttatc--actaa
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49610 23 -     97555 t-aa------caacacaa-a---------tttatc--actaa
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6334 23 +     30972 t-aa------caacacaa-a---------tttatc--actaa
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44054 23 -     52037 t-aa------caacacaa-a---------tttatc--actaa
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60457 23 -    111500 t-aa------caacacaa-a---------tttatc--actaa
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923379 24 -   3816255 taaa------caccagaa-a---------tgcatt--gttca
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2595 24 -     28519 taaa------caacagaa-a---------tgagtt--gatta
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2736 24 -      6791 tagg------tagcagaa-a---------cttatt--gctca
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_420802                                 882 25 -      1361 taaa-----acaacagaa-a---------tgtatt--gctag
i Gorilla_beringei.k141_420802                           I 112 C 0
s Gorilla_gorilla.LT578341.1                                257761 25 - 186649187 taaa-----acaacagaa-a---------tgtatt--gctag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3801 24 -     78134 taaa------caacagaa-a---------tttact--gctca
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16141 23 -     40692 t-aa------caacacaa-a---------tttatc--actaa
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37540 23 +     49394 t-aa------caacacaa-a---------tttatc--actaa
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62411 23 -     66874 t-aa------caacacaa-a---------tttatc--actaa
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11282 23 -     42923 t-aa------caacacaa-a---------tttatc--actaa
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18284 23 -     53142 t-aa------caacacaa-a---------tttatc--actaa
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933801 24 -  22651954 tgaa------ccccagaa-a---------tgtatt--gttca
i Heterocephalus_glaber.JH602082.1                       C 0 I 10
s Hoolock_leuconedys.ctg274                                    144232 25 -    630532 taaa-----acaacagaa-a---------tgtatt--gctag
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73214 19 +    143317 taaa------tgccagaa-a---------t-------gttca
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7273 18 +     12352 taaa-----acaacagaa-a---------tgta---------
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14457 18 +     55766 taaa-----acaacagaa-a---------tgta---------
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054057 18 + 191637585 taaa-----acaacagaa-a---------tata---------
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802935 18 +  11177569 taaa-----acaacagaa-a---------tata---------
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8555 24 -    135385 tgaa------cacgagaa-a---------tgtatt--gttcg
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388269 24 +   7955117 taaa------taacagaa-a---------tttatt--actta
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3829 23 +     11955 t-aa------caacacaa-a---------tttatc--gctaa
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44669 25 +    110728 taaa-----acagcagaa-a---------tttatt--gctag
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14760938 23 +  30322482 t-aa------caacacaa-a---------tttatc--actaa
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5572 25 -     13097 caaa-----acaatagaa-a---------ctcact--gctgg
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5326 25 +      5940 caaa-----acaatagaa-a---------ctcact--gctgg
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5149 25 -      5717 caaa-----acaatagaa-a---------ctcact--gctgg
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      302 18 +      8855 taaa-----acaacagaa-a---------cctg---------
i Leontopithecus_chrysomelas.k141_3286424                C 0 I 3
s Leontopithecus_rosalia.k141_1583055                         5104 18 -     13645 taaa-----acaacagaa-a---------cctg---------
i Leontopithecus_rosalia.k141_1583055                    C 0 I 3
s Lepilemur_ankaranensis.k141_567626                         10454 23 +     29618 t-aa------caatgcaa-a---------tttatc--actaa
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10450 23 +     31569 t-aa------caatgcaa-a---------tttatc--actaa
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10460 23 +     24756 t-aa------caacgcaa-a---------tttatc--actaa
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10460 23 +     16388 t-aa------caatgcaa-a---------tttatc--actaa
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               335580 25 -   1826925 taaa-----acaacagaa-a---------tgcatt--gctag
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              46972 25 -     61512 caaa-----acgacagaa-a---------tgcatt--gctag
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374634 25 -  60120075 caaa-----acgacagaa-a---------tgcatt--gctag
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26902 25 +     30207 taaa-----acgacagaa-a---------tgcatt--gctag
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1740 25 -      5035 taaa-----acgacagaa-a---------tgcatt--gctag
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26855 25 +     30527 taaa-----acgacagaa-a---------tgcatt--gctag
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38031 25 -     50087 taaa-----acgacagaa-a---------tgcatt--gctag
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47775 25 +     51645 taaa-----acgacagaa-a---------tgcatt--gctag
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                416978 25 - 187317192 taaa-----acgACAGAA-A---------TGCATT--GCTAG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401208 25 +  25927173 taaa-----acgACAGAA-A---------TGCATT--GCTAG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50380 25 -     62418 taaa-----acgacagaa-a---------tgcatt--gctag
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2911 25 +     14901 taaa-----acgacagaa-a---------tgcatt--gctag
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46852 25 +     59329 taaa-----acgacagaa-a---------tgcatt--gctag
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272760 25 +    668171 taaa-----acgacagaa-a---------tgcatt--gctag
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1392 25 -      5049 taaa-----acgacagaa-a---------tgcatt--gctag
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4558 25 +     17132 taaa-----acgacagaa-a---------tgcatt--gctag
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324048 25 +  24302211 taaa-----acaacagaa-a---------tgcatt--gctag
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358879 25 -    752769 taaa-----acaacagaa-a---------tgcatt--gctag
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502482 24 +  40650429 taaa------taacagaa-a---------tttatt--actta
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_582562                                11694 24 +     17804 taaa-----acaacagaa-a---------gttatt--g-aag
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12194 24 -     12984 taaa-----acaacagaa-a---------cttatt--g-aag
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20513 24 -     26561 taaa-----acaacagaa-a---------cttatt--g-aag
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986292 23 +  93316391 t-ga------caacacaa-a---------tttatc--actaa
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24146 25 -     27822 taaa-----acaacagaa-a---------tgcatt--gctag
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54067 23 -     62432 t-ga------caacacaa-a---------tttatc--actaa
i Mirza_zaza.k141_766280                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_12866             85871 20 -     86153 TAAA------TAACAGAA-A---------TGTATT--G----
i Muscardinus_avellanarius.MusAve_scaffold_12866         I 232 N 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64520 24 +     67721 TAAA------CATCAGAA-A---------TGTACT--GTTCA
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              30923 25 +     34575 taaa-----acaacagaa-a---------tgcatt--gctag
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55163 25 -    132029 taaa-----acaacagaa-a---------tgtatt--gctag
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11258 25 -     16345 taaa-----acaacagaa-a---------tgtatt--gctag
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17143 25 +     22201 taaa-----acaacagaa-a---------tgtatt--gctag
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415364 25 -  22158432 taaa-----acaacagaa-a---------tgtatt--gctag
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27541 25 -     54323 taaa-----acaacagaa-a---------tgtatt--gctag
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Ochotona_princeps.JH802162.1                             2558322 24 -   3988456 TAAA------CCACAGAC-A---------ATTATT--GGTCA
i Ochotona_princeps.JH802162.1                           C 0 C 0
s Octodon_degus.JH651603.1                                11056609 24 -  11899542 taaa------catcagaa-a---------tgtgct--gttca
i Octodon_degus.JH651603.1                               C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  558 25 +      1339 taaa-----acaacagaa-a---------tatatt--gctAG
i Pan_paniscus.AJFE02004362.1                            n 522 C 0
s Pan_troglodytes.KZ622849.1                                 36497 25 -    110857 taaa-----acaacagaa-a---------tatatt--gctAG
i Pan_troglodytes.KZ622849.1                             I 70 C 0
s Papio_anubis.CM001495.2                                   245057 25 - 183742232 taaa-----acaacagaa-a---------tgcatt--gcTAG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11342 25 +     21308 taaa-----acaacagaa-a---------tgcatt--gctag
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294085 25 -  20919399 taaa-----acaacagaa-a---------tgcatt--gctag
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  23982 25 -     27687 taaa-----acaacagaa-a---------tgcatt--gctag
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     661 25 +     10553 taaa-----acaacagaa-a---------tgcatt--gctag
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   621 25 -     10386 taaa-----acaacagaa-a---------tgcatt--gctag
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3348 24 +      9367 taag------caatagac-a---------tttatt--gttca
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 2
s Petromus_typicus.PetTyp_scaffold_17301                     33371 24 -     56120 taaa------caccagaa-a---------tgtgtt--gtgtc
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                            4305 25 +     55023 taaa-----acaacagaa-a---------tgcatt--gctag
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3827 25 -     89929 taaa-----acaacagaa-a---------tgcatt--gctag
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4417 25 +     40849 taaa-----acaacagaa-a---------tgcatt--gctag
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256147 25 +  14605196 taaa-----acaacagaa-a---------tgcatt--gcTAG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66211 25 +    207309 tgaa-----acaagagga-g---------tttatt--gctag
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7299 25 -     25401 tgaa-----acaagagga-g---------tttatt--gctag
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33047 25 +     58159 tgaa-----acaagagga-g---------tttatt--gctag
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33323 25 +     63561 tgaa-----acaagagga-g---------tttatt--gctag
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33083 25 +     51148 tgaa-----acaagagga-g---------tttatt--gctag
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558053 25 -   4542175 tgaa-----acaagagga-g---------tttatt--gctag
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33067 25 +     51125 tgaa-----acaagagga-g---------tttatt--gctag
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9485 25 +     39866 tgaa-----acagcagga-a---------tttgtt--gctgg
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4567 25 -      9282 tgaa-----acagcagga-a---------tttgtt--gctgg
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43971 25 -     87950 tgaa-----acagcagga-a---------tttgtt--gctgg
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44365 25 -     88961 tgaa-----acagcagga-a---------tttgtt--gctgg
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9063 25 -     39403 tgaa-----acagcagga-a---------tttgtt--gctgg
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44014 25 +     87928 tgaa-----acagcagga-a---------tttgtt--gctgg
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9062 25 -     60166 tgaa-----acagcagga-a---------tttgtt--gctgg
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      15999 25 -     67232 tgaa-----acagcagga-a---------tttgtt--gctgg
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43915 25 -     90634 tgaa-----acagcagga-a---------tttgtt--gctgg
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45382 25 +     89403 tgaa-----acagcagga-a---------tttgtt--gctgg
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   180917 25 - 189387572 taaa-----acaacagaa-a---------tgtatt--gctag
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195657 25 -   9816681 taaa-----acaacagaa-a---------tgtatt--gctag
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29505 25 +     69807 taaa-----acaacagaa-a---------cgcatt--gctag
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46686 25 -     80239 taaa-----acaacagaa-a---------tgcatt--gctag
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984086 23 +   4620579 t-aa------caacacaa-a---------tttatc--actaa
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567581 23 -   2598838 t-aa------caacacaa-a---------tttatc--actaa
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5219 23 -      7103 t-aa------caacacaa-a---------tttatc--actaa
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5816 23 -     11706 t-aa------caacacaa-a---------tttatc--actaa
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9553 23 -     30655 t-aa------caacacaa-a---------tttatc--actaa
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35867 23 +     46564 t-aa------caacacaa-a---------tttatc--actaa
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96146 23 -     98465 t-aa------caacacaa-a---------tttatc--actaa
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9785 23 +     35169 t-aa------caacacaa-a---------tttatc--actaa
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28872 25 +     91421 taaa-----acaacagaa-a---------tgcatt--gctag
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155424 25 -   7812017 taaa-----acaatagaa-a---------tgcatt--gctag
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9729 25 +     72585 taaa-----acaacagaa-a---------tgcatt--gctag
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3336 25 +      7119 tgaa-----acaacagaa-a---------tgcatt--gctag
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124006 25 + 195417433 tgaa-----acaacagaa-a---------tgcatt--gcTAG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238178 25 -   7961872 tgaa-----acaacagaa-a---------tgcatt--gctag
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2012906                                436 30 -      1130 cagaacagaacaatagaa-a---------ctcact--gctgg
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5338 25 +      6077 caga-----acaatagaa-a---------ctcact--gctgg
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5432 25 +      5971 caga-----acaatggaa-a---------ctcacc--actgg
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5349 25 +      5932 caga-----acaatggaa-a---------ctcact--gctgg
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3694 25 -      4390 caga-----acaatggaa-a---------ctcact--gctgg
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393451 25 - 209938924 caga-----acaatagaa-a---------ctcagt--gctag
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5297 25 +      5979 caga-----acaatggaa-a---------ctcact--gctgg
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1867 25 -     22275 caga-----acaatagaa-a---------ctcact--gctgg
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110464 25 + 121099817 taaa-----acaacagaa-a---------tttatt--gctag
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32031 25 -     47369 taaa-----acaacagaa-a---------tttatt--gctag
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32417 25 -     79414 taaa-----acaacagaa-a---------tttatt--gctag
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29108 25 -     34454 taaa-----acaacagaa-a---------tttatt--gctag
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16509 25 -     22428 taaa-----acaacagag-a---------tttatc--gctag
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31663 25 -     47109 taaa-----acaacagaa-a---------tttatt--gctag
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239698 25 +   5703754 taaa-----acaacagga-a---------tttatt--gctag
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9288 25 +     21866 taaa-----acaacagga-a---------tttatt--gctag
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                           311 25 +     11297 taaa-----acaacagaa-a---------tgcatt--gctag
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30704 25 +     58920 taaa-----acaacagaa-a---------tgcatt--gctag
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17202 25 -     45317 taaa-----acaacagaa-a---------tgcatt--gctag
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24860 25 -     42441 taaa-----acaacagaa-a---------tgcatt--gctag
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27536 25 -     29113 taaa-----acaacagaa-a---------tgcatt--gctag
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30613 25 -     48123 taaa-----acaacagaa-a---------tgcatt--gctag
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869847 24 +   3870691 taaa------taacagaa-a---------tttatt--actta
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392629 25 +   1523678 taaa-----acaacagaa-a---------tgtatt--gctag
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2155  9 +      9917 -------------------------------tatt--gctgg
i Tarsius_lariang.k141_1733899                           I 9 C 0
s Tarsius_wallacei.k141_226975                                8953  9 +     20590 -------------------------------tatt--gctgg
i Tarsius_wallacei.k141_226975                           I 9 C 0
s Theropithecus_gelada.CM009954.1                           354866 25 - 186847797 taaa-----acaacagaa-a---------tgcatt--gcTGG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25529 24 -     33621 caaa------caccagaa-a---------tgtatt--gtgca
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22614 25 +     26378 taaa-----acaacagaa-a---------tgcatt--gctag
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35413 25 -     78344 taaa-----acaacagaa-a---------tgcatt--gctag
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21939 25 +     25722 taaa-----acaacagaa-a---------tgcatt--gctag
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30369 25 -     62838 taaa-----acaacagaa-a---------tgcatt--gctag
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30358 25 +     46913 taaa-----acaacagaa-a---------tgcatt--gctag
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11097 25 -     28527 taaa-----acaacagaa-a---------tgcatt--gctag
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32304 25 -     64340 taaa-----acaacagaa-a---------tgcatt--gctag
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30342 25 -     63452 taaa-----acaacagaa-a---------tgcatt--gctag
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11789 25 +     22490 taaa-----acaacagaa-a---------tgcatt--gctag
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5157 25 -      6147 taaa-----acaacagaa-a---------tgcatt--gctag
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12070 25 -     13050 taaa-----acaacagaa-a---------tgcatt--gctag
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257232 25 -   6242583 taaa-----acaacagaa-a---------tgcatt--gctag
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3328 25 +     19340 taaa-----acaacagaa-a---------tgcatt--gctag
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836575 14 -   4065304 taaa------taacagaa-a---------t------------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10597 23 -     70247 taaa------taatagaa-atgtttacaat------------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  26739 23 -     30710 t-aa------caacacaa-a---------tttatc--actaa
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25646 23 -    147434 t-aa------caacacag-a---------tttatc--actaa
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175602 25 -    224448 taaa------taacagaaaa---------tttatt--gctca
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156  0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380  0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524  0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699  0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316  3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992  0 +  89631738 C
e Mus_musculus.chr8                                       41689686  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513  0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334  0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274  0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700  0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8486 43 +     36723 tagttctggaggcc-ag-a-ggtccaagc------tcaaggcagcag----tagaa
s Allenopithecus_nigroviridis.k141_3755588                   49641 43 +     53615 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1668 43 +     13857 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18223 43 -     21945 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19908 43 +     32033 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73678 43 -     84148 tagttctggaggct-ag-a-agtccaagc------tgaaggcaacag----tagat
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45917 43 -     78289 tagttctggaggct-ag-a-agtccaagc------tgaaggcagcag----tagat
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45356 43 +     55831 tagttctggaggct-ag-a-agtccaagc------tgaaggcagcag----tagat
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43806 43 -     64179 tagttctggaggct-ag-a-agtccaagc------tgaaggcagcag----tagat
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            914 43 -      3959 tagttctggaggct-ag-a-agtccaagc------tgaaggcagcag----tagat
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42431 43 +     45454 tagttctggaggct-ag-a-agttcaagc------tgaaggcagcag----tagat
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48080 43 +     70886 tagttctggaggct-ag-a-agtccaagc------tgaaggcagcag----tagat
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10253 43 +     30854 tagttctggaggct-ag-a-agtccaagc------tgaaggcagcag----tagat
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34387 43 +     42133 tagttctggaggct-ag-a-agtccaagc------tgaaggcagcag----tagat
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2644 43 +     17741 tagttctggaggct-ag-a-tgtccaagc------tcaaggcagcag----tagat
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3269 43 -     15923 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcag----tagat
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673551 43 +   5030052 tagttctggaggct-ag-a-cgTCCAAGC------TCAAGGCAGCAG----TAGAT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3545 43 -     16391 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcag----tagat
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3104 43 -     17186 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcag----tagat
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25417 26 -     32367 --------------------agcacaaga------agaaggaatcag----atgat
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 405 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276143 43 +  21539123 tagttctggaggct-ag-a-agtccaagc------tgaaggcagcag----tagat
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12310 42 +     48076 tagttctggaggct-ag-a-agtccaagc------tgaaggca-cag----tagat
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7445 42 -     28759 tagttctggaggct-ag-a-agtccaagc------tgaaggca-cag----tagat
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35000 43 +     44353 tagttctggaggct-ag-a-agtccaagc------tgaaggcagcag----tagat
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50370 42 -     71267 tagttctggaggct-ag-a-agtccaagc------tgaaggca-cag----tagat
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24428 42 -     33135 tagttctggaggct-gg-a-agtccaagc------tgaaggca-cag----tagat
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7710 44 +     11645 cagttctggagact-gg-gaagtccaaga------tcaaggcaccag----tagat
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7718 44 -     19611 cggttctggagact-gg-gaagtccaaga------tcaagacaccag----tagat
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9234 43 +     28062 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcag----tggat
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44528 43 -     91139 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcag----tggat
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22054 43 +     95584 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcag----tggat
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         21967 43 +    119600 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcag----tggat
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11620 43 +     18648 tagttctggaggcc-ag-a-cgtcccagc------tcaaggcagcag----tagat
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11135 43 -     13885 tagttctggaggcc-ag-a-tgtccaagc------tcaaggcagcaa----cagat
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3225 43 -      8861 tagttctggaggcc-ag-a-cgtcccagc------tcaaggcagcag----tagat
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455614 43 + 189096842 Tagttctggaggcc-ag-a-cgtcccagc------tcaaggcagcag----tagat
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3136 43 +      8664 tagttctggaggtc-ag-a-catcccagc------tcaaggcagcag----tagat
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    956 38 -      1607 ctattccagaggct-agga-cattcaa------------ggtactag----cagtt
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272251 44 +    496798 cagttctgaaggctgag-a-agttCCAGA------TCAAGGGACCAG----AAGAC
i Carlito_syrichta.NW_007259797.1                        I 9 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29121 44 -     39886 ctcttctgaagatt-ggga-agtccaaga------tgaaggcaccag----cagat
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997843 44 +  23392119 ttatttcagaagct-gaaa-tgttcaaga------gtaaggcactag----caaat
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001285 44 +  23407841 ttatttcagaagct-gaaa-tgttcaaga------ttaaggcactag----caaat
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64364 44 -     66877 ttatttcagaagct-gaaa-tgttcaaga------ttaaggcactag----caaat
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6535 43 -     12580 tagttctggaggcc-ag-a-cgtcccagc------tcaaggcagcag----tagat
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44593 43 +     53515 tagttctggaggcc-ag-a-cgtcccagc------tcaaggcagcag----tagat
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  372515 43 -  26074798 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcac----cagat
i Cebus_albifrons.Contig27                               T 1833 I 1833
s Cebus_olivaceus.k141_1404781                                9403 43 -     34880 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcac----cagat
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68499 43 -     89041 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcac----cagat
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4211 44 -      5494 cagttctgaaggctgag-a-agttccaga------tcaagagaccag----aagac
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                142723 43 -   4669795 TAGTTCTGGAGGCC-CA-A-AGTCCAAGC------TCAAGGCAGCAG----CAGAC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46462 43 +     47900 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1895 43 -     14410 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46279 43 -    148725 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28555 43 -     40656 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8514 43 +     20796 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13628 43 -     17524 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29360 43 -     34525 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13140 43 -     25376 tagttctagaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365727 43 -  39242232 tagttctggaggcc-ca-a-agtccaagc------tcaaagcagcag----cagac
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271454 43 +  21565898 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33819 43 -     45857 tagttctggaggca-ca-a-agtccaagc------tcaaggcagcag----cagac
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28720 43 -     32606 tagttctggaggcc-ca-a-agtccaagc------tcaaggcaacag----cagac
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4883 43 +      8499 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27281 43 +     70610 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----caggc
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24242 43 +     36323 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32124 37 -     33796 cagt-------tct-gg-gaagtccagga------ttgaggcgccag----tagat
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6620 44 -     15404 cagttctggagact-gg-gaagtccagga------tcgaggcaccag----tagat
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10341 43 -     32913 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----cagat
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20754 43 -     40346 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----cagat
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21009 43 +    216457 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----cagat
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20798 43 +     39636 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----cagat
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240186 44 -   2543920 ctcttccagaggct-ggga-cattcaaaa------ttaaggcactag----aagat
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            466 40 +      1057 tagttctggaggcc-ag-a-cgtccaggc------tcagggcggcag-------at
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43868 43 -    112038 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----cggat
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9419 43 +     34062 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcag----cggat
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345143 43 +  18827391 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11682 43 -     44032 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306529 43 - 135778131 TAGTTCTGGAGGCC-CA-G-AGTCCAAGC------TCAAGGCAGCAG----CAGAC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             410941 43 -   2368649 TAGTTCTGGAGGCC-TA-A-AGTCCAAGC------TCGAGGCGGCAG----CAGAC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380823 43 - 200372422 tagttctggaggcc-ta-a-agtccaagc------tcgaggcggcag----cagac
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4380 43 -     84244 tagttctggaggcc-ta-a-agtccaagc------tcgaggcggcag----cagac
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646829 43 -   1526836 ccaatgtgaaggct-taga-agttca-ga------tgagggtgccag----tagat
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20023 44 +     50838 ctactccacagagt-agga-cattcaagc------ttaagacactag----cagtt
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5759 44 +     36344 ttattccagaagct-ggga-tgttcaaga------ttaaggcactag----cagat
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29543 44 +     75252 ttaatccagaggct-gaga-tgttcaaga------ttaaggcactag----cagat
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294024 43 +  12879189 tagttctggagact-gg-g-aggctaaga------tcaaggcaccga----tagac
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100253 44 -    115145 ctatttcagaggct-gggg-cattcaaga------ttaaggcactag----cagat
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952033 16 -  37912305 ------------------------------------ggaggcatcaa----cagac
i Dipodomys_ordii.KN672350.1                             I 2 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6963 16 -     10735 ------------------------------------ggaggcatcaa----cagac
i Dipodomys_stephensi.DipSte_scaffold_89095              I 2 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10642 44 +     14636 TTATTTCAGAGGCT-GAGA-TGTTCAAGA------TTAAGGCACTAG----TAGAT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Erythrocebus_patas.Contig38                               264672 43 +  21539334 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16239 44 -     24895 cagttctggagact-gg-gaagtccaaga------tcaaggcaccag----tagat
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43949 44 -     70999 cagttctggagact-gg-gaagtccaaga------tcaaggcaccag----tagat
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87919 44 +    112731 cagttctggagact-gg-gaagtccaaga------tcaaggcaccag----tagat
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44482 44 +     68309 cagttctggagact-gg-gaagtccaaga------tcaaggcaccag----tagat
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54806 44 -     65740 cagttctggagact-gg-gaagtccaagt------tcaaggcaccag----tagat
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25439 44 -     75513 cagttctggagact-gg-gaagtccaaga------tcaaggcaccag----tagat
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49633 44 -     97555 cagttctggagact-gg-gaagtccaaga------tcaaggcaccag----tagat
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6357 44 +     30972 cagttctggagact-gg-gaagtccaaga------tcaaggcaccag----tagat
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44077 44 -     52037 cagttctggagact-gg-gaagtccaagt------tcaaggcaccag----tagat
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60480 44 -    111500 cagttctggagact-gg-gaagtccaaga------tcaaggcaccag----tagat
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923403 44 -   3816255 ccattctagaagct-agga-agttccagg------ttaaggcactag----cagat
i Fukomys_damarensis.KN121974.1                          C 0 I 184
s Galeopterus_variegatus.GalVar_scaffold_51812                2619 44 -     28519 ctgttctagaggct-ggaa-accccaaga------tcaaggctccag----cagat
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2760 44 -      6791 ttgttctggaggct-ggga-agtccaaga------ttaaggctccag----cagat
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_420802                                 907 43 -      1361 tagttctggaggcc-ag-a-ggtccaagc------tcaaggcagcag----tagac
i Gorilla_beringei.k141_420802                           C 0 I 5
s Gorilla_gorilla.LT578341.1                                257786 43 - 186649187 tagttctggaggcc-ag-a-ggtccaagc------tcaaggcagcag----tagac
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3825 48 -     78134 ttattctggaggct-ggga-agtccaaga------ttaaggcaccagcaagcagat
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 14
s Hapalemur_alaotrensis.k141_330369                          16164 44 -     40692 caattctggagact-gg-gaagtccaaga------ttaaggcaccag----tagat
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37563 44 +     49394 caattctggagact-gg-gaagtccaaga------ttaaggcaccag----tagat
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62434 44 -     66874 caattctggagact-gg-gaagtccaaga------ttaaggcatcag----tagat
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11305 44 -     42923 caattctggagact-gg-gaagtccaaga------ttaaggcaccag----tagat
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18307 44 -     53142 caattctggagact-gg-gaagtccaaga------ttaaggcaccag----tagat
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1933835 26 -  22651954 --------------------agttcaaga------ttaaggcactag----caaat
i Heterocephalus_glaber.JH602082.1                       I 10 I 157
s Hoolock_leuconedys.ctg274                                    144257 43 -    630532 tagttccggaggcc-ag-a-ggtccaagc------tcaaggcagcag----tagac
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73233 44 +    143317 ttatttcagaggct-gaga-tgttcaaga------ttaaggcactag----cagat
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7291 40 +     12352 ---ttccggaggcc-ag-a-ggtccaagc------tcaaggcagcag----tagac
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14475 40 +     55766 ---ttccggaggcc-ag-a-ggtccaagc------tcaaggcagcag----tagac
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054075 40 + 191637585 ---ttccggaggcc-ag-a-ggtccaagc------tcaaggcagcag----tagac
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802953 40 +  11177569 ---ttccggaggcc-ag-a-ggtccaagc------tcaaggcagcag----tagac
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8579 44 -    135385 ccattctagaggct-gaga-agttcaaga------ttgaggtactag----aagat
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388293 44 +   7955117 ccattctggaggct-ggga-acttcaaga------tcaaggcacgag----aagat
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3852 44 +     11955 cagttctggagact-gg-gaagtccaaga------tcaaggcaccag----tagat
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44694 43 +    110728 tagttctggaggct-ag-a-agtccaagc------tgaaggcagcag----tagat
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14760961 44 +  30322482 cagttctggagact-gg-gaagtccaaga------ttaaggcaccag----tagat
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5597 40 -     13097 tagttctggaggcc-ag-a-cttccaggc------tcatggcag-------tagat
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5351 40 +      5940 tagttctggaggcc-ag-a-cttccaggc------tcacggcag-------tagat
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5174 40 -      5717 tagttctggaggcc-ag-a-cttccaggc------tcacggcag-------tagat
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      323 43 +      8855 cggttctggaggcc-ag-a-cgtccacgc------tcaaggcagcag----tagat
i Leontopithecus_chrysomelas.k141_3286424                I 3 C 0
s Leontopithecus_rosalia.k141_1583055                         5125 43 -     13645 cggttctggaggcc-ag-a-cgtccacgc------tcaaggcagcag----tagat
i Leontopithecus_rosalia.k141_1583055                    I 3 C 0
s Lepilemur_ankaranensis.k141_567626                         10477 44 +     29618 cagttctggagact-gg-gaagtcaaaga------tcaaggcaccgg----tagat
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10473 44 +     31569 cagttctggagact-gg-gaagtcaaaga------tcaaggcaccgg----tagat
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10483 44 +     24756 cagttccggagact-gg-gaagtcaaaga------tcaaggcaccgg----tagat
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10483 44 +     16388 cagttctggagact-gg-gaagtcaaaga------tcaaggcaccgg----tagat
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               335605 43 -   1826925 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              46997 43 -     61512 tagttccggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagcc
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374659 43 -  60120075 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagcc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26927 43 +     30207 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagcc
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1765 43 -      5035 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagcc
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26880 43 +     30527 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagcc
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38056 43 -     50087 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagcc
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47800 43 +     51645 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagcc
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417003 43 - 187317192 TAGTTCTGGAGGCC-CA-A-AGTCCAAGC------TCAAGGCAGCAG----CAGCC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401233 43 +  25927173 TAGTTCTGGAGGCC-CA-A-AGTCCAAGC------TCAAGGCAGCAG----CAGCC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50405 43 -     62418 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagcc
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2936 43 +     14901 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagcc
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46877 43 +     59329 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagcc
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272785 43 +    668171 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagcc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1417 43 -      5049 tagttccggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagcc
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4583 43 +     17132 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagcc
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324073 43 +  24302211 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358904 43 -    752769 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502506 44 +  40650429 ccattctggaggct-ggga-actccaaga------tcaaggcacgag----aagat
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_582562                                11718 43 +     17804 tagttctggaggcc-ag-a-cgtcccagc------tcaaggcagcag----tagat
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12218 43 -     12984 tagttctggaggcc-ag-a-cgtcccagc------tcaaggcagcag----tagat
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20537 43 -     26561 tagttctggaggcc-ag-a-cgtcccagc------tcaaggcagcag----tagat
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986315 44 +  93316391 cagttctggagtct-gg-gaagtccagga------tcaaggcacCAG----TAGAC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24171 43 -     27822 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54090 44 -     62432 cagttctggagact-gg-gaagtccagga------tcaagtcaccag----tagat
i Mirza_zaza.k141_766280                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560                855 45 -    124358 ttcttcttgaagtt-GGAA-AATCCAAGGT-----TTAAGGCACTAG----CAGAT
i Muscardinus_avellanarius.MusAve_scaffold_5560          N 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64544 38 +     67721 CTATTCCAGAGGCT-AGGA-CATTCAA------------CACACTAG----CAGTT
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              30948 43 +     34575 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55188 43 -    132029 tagttccggaggcc-ag-a-ggtccaagc------tcaaggcagcag----tagac
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11283 43 -     16345 tagttccggaggcc-ag-a-ggtccaagc------tcaaggcagcag----tagac
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17168 43 +     22201 tagttccggaggcc-ag-a-ggtccaagc------tcaaggcagcag----tagac
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415389 43 -  22158432 tagttccggaggcc-ag-a-ggtccaagc------tcaaggcagcag----tagac
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27566 43 -     54323 tagttccggaggcc-ag-a-ggtccaagc------tcaaggcagcag----tagac
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Ochotona_princeps.JH802162.1                             2558346 35 -   3988456 TGGTTTCAGAGGCT-GGAA-GGTTTGTAATAGAGATC-------------------
i Ochotona_princeps.JH802162.1                           C 0 N 0
s Octodon_degus.JH651603.1                                11056633 44 -  11899542 ctattccacaggct-agaa-cattcaaga------tcaaagcattag----cagtt
i Octodon_degus.JH651603.1                               C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  583 43 +      1339 TAGTTTTGGAGGCC-AG-A-GGTCCAAGC------TCAAGGcagcag----tagac
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.KZ622849.1                                 36522 43 -    110857 TAGTTTTGGAGGCC-AG-A-GGTCCAAGC------TCAAggcagcag----tagac
i Pan_troglodytes.KZ622849.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   245082 43 - 183742232 TAGTTCTGGAGGCC-CA-A-AGTCCAAGC------TCAAGGCAGCAG----CAGAC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11367 43 +     21308 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294110 43 -  20919399 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24007 43 -     27687 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     686 43 +     10553 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   646 43 -     10386 tagttctggaggcc-ca-a-agtccaagc------tcaaggcagcag----cagac
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3374 16 +      9367 ------------------------------------ggatgcaccaa----cagac
i Perognathus_longimembris.PerPac_flattened_line_89005   I 2 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33395 44 -     56120 ccattctagaagct-ggga-agttcaaca------atacggcactag----caggt
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 137
s Piliocolobus_badius.k141_2704958                            4330 43 +     55023 tagttctggaggcc-ta-a-agtccaagc------tcaaggtggcag----cagac
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3852 43 -     89929 tagttctggaggcc-ta-a-agtccaagc------tcaaggtggcag----cagac
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4442 43 +     40849 tagttctggaggcc-ta-a-agtccaagc------tcaaggtggcag----cagac
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256172 43 +  14605196 TAGTTCTGGAGGCC-TA-A-AGTCCAAGC------TCAAGGTGGCAG----CAGAC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66236 43 +    207309 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----tggat
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7324 43 -     25401 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----tggat
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33072 43 +     58159 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----tggat
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33348 43 +     63561 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----tggat
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33108 43 +     51148 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----tggat
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558078 43 -   4542175 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----tggat
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33092 43 +     51125 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----tggat
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9510 43 +     39866 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----cagat
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4592 43 -      9282 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----cagat
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       43996 43 -     87950 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----cagat
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44390 43 -     88961 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----cagat
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9088 43 -     39403 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----cagat
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44039 43 +     87928 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----cagat
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9087 43 -     60166 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----cagat
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16024 43 -     67232 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----cagat
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43940 43 -     90634 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----cagat
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45407 43 +     89403 tagttctggaggct-gg-a-cgtccaagc------tcaaggcagcag----cagat
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   180942 43 - 189387572 tagttctggaggcc-ag-a-ggtcaAAGC------TCAAGGCAGCAG----CAGAC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195682 43 -   9816681 tagttctggaggcc-ag-a-ggtcaaagc------tcaaggcagcag----cagac
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29530 43 +     69807 tagttctggaggcc-ta-a-agtccaagc------ttaaggcggcag----cagac
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46711 43 -     80239 tagttctggaggcc-ta-a-agtccaagc------ttaaggcggcag----cagac
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984109 44 +   4620579 cagttctggagact-gg-gaagtccaaga------ttaaggcgccag----tagat
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567604 44 -   2598838 cagttctggagact-gg-gaagtccaaga------tgaaggcaccag----tagat
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5242 44 -      7103 cagttctggagact-gg-gaagtccaaga------tcaaggcaccag----tagat
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5839 44 -     11706 cagttctggagact-gt-gaagtccaaga------tcaaggcaccag----tagat
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9576 44 -     30655 cagttctggagact-gt-gaagtccaaga------tcaaggcaccag----tagat
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35890 44 +     46564 cagttctggagact-gt-gaagtccaaga------tcaaggcaccag----tagat
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96169 44 -     98465 cagttctggagact-gg-gaagtccaaga------tcaaggcaccag----cagat
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9808 44 +     35169 cagttctggagact-gg-gaagtccaaga------tcaaggcaccag----tagat
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28897 43 +     91421 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155449 43 -   7812017 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9754 43 +     72585 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3361 43 +      7119 tagttctggaggcc-ta-a-agtccaagc------tgaaggcggcag----cagac
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124031 43 + 195417433 TAGTTCTGGAGGCC-TA-A-AGTCCAAGC------TGAAGGCGGCAG----CAGAC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238203 43 -   7961872 tagttctggaggcc-ta-a-agtccaagc------tgaaggcggcag----cagac
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2012906                                466 40 -      1130 tagttctggaggcc-ag-a-cgtccaggc------tcagggcgg-------cagat
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5363 40 +      6077 tggttctggaggcc-ag-a-cgtccaggc------tcagggcgg-------cagat
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5457 40 +      5971 tggttctggaggcc-ag-a-tgtccaggc------tcagggcgg-------cagat
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5374 40 +      5932 tagttctggaggcc-ag-a-cgtccaggc------tcagggcag-------cagat
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3719 40 -      4390 tagttctggaggcc-ag-a-cgtccaggc------tcagggcag-------cagat
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393476 40 - 209938924 tagttctggaggcc-ag-a-cgtccaggc------tcagggcgg-------cggat
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5322 40 +      5979 tggttctggaggcc-ag-a-cgtccaggc------tcagggcgg-------cagat
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1892 40 -     22275 tggttctggaggcc-ag-a-cgtccaggc------tcagggcgg-------cagat
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110489 43 + 121099817 tagttctggaggct-ag-a-cgTCCAAGC------TCAAGGCAGCAG----TAGAT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32056 43 -     47369 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcag----tagat
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32442 43 -     79414 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcag----tagat
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29133 43 -     34454 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcag----tagat
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16534 43 -     22428 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcag----tagat
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31688 43 -     47109 tagttctggaggct-ag-a-cgtccaagc------tcaaggcagcag----tagat
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239723 43 +   5703754 tagttctggaggct-ag-a-cgtccacgc------tccaggcagcac----cagat
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9313 43 +     21866 tagttctggaggct-ag-a-cgtccacgc------tccaggcagcac----cagat
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                           336 43 +     11297 tagttctgaaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30729 43 +     58920 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17227 43 -     45317 tagttctggcggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24885 43 -     42441 tagttctggcggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27561 43 -     29113 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30638 43 -     48123 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869871 44 +   3870691 ccattctggaggct-ggga-actccaaga------tcaaggcacgag----aagat
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392654 43 +   1523678 tagttccggaggcc-ag-a-ggtccaagc------tcaaggcagcag----tagac
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2164 44 +      9917 cagttctgatgactgag-a-agttcaaga------tcaagggaccag----aagac
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                8962 44 +     20590 cagttctgatgactgag-a-agttcaaga------tcaagggaccag----aagac
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354891 43 - 186847797 TAGTTCTGGAGGCC-CA-A-AGTCCAAGC------TCAAGGCAGCAG----CAGAC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25553 44 -     33621 tcattttagaagtg-gaga-agttcaaca------taaaggcaataa----cagat
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 167
s Trachypithecus_auratus.k141_1189070                        22639 43 +     26378 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35438 43 -     78344 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       21964 43 +     25722 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30394 43 -     62838 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30383 43 +     46913 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11122 43 -     28527 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32329 43 -     64340 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30367 43 -     63452 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11814 43 +     22490 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5182 41 -      6147 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----c--ac
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12095 41 -     13050 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----ca--c
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257257 43 -   6242583 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3353 43 +     19340 tagttctggaggcc-ta-a-agtccaagc------tcaaggcggcag----cagac
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836589 40 -   4065304 ----tatggaggct-gaga-agcccaaga------tcaagttgccaa----cagat
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10620 40 -     70247 ----tatggaagct-gaga-agcccaaga------tcaagttaccaa----cagat
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  26762 44 -     30710 caggtttggagact-gg-gaagtccaaga------tcaaggcacccg----tagat
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25669 44 -    147434 caggtttggagact-gg-gaagtccgaga------tcaaggcaccag----tagat
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175627 44 -    224448 ccattctggaggct-ggga-agtccaaga------ttaaggtaccag----aagat
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156  0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380  0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524  0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699  0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316  3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992  0 +  89631738 C
e Mus_musculus.chr8                                       41689686  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513  0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334  0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274  0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700  0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8529 5 +     36723 tcggt
s Allenopithecus_nigroviridis.k141_3755588                   49684 5 +     53615 tcggt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1711 5 +     13857 ccggt
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18266 5 -     21945 ccggt
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19951 5 +     32033 ccggt
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73721 5 -     84148 ttggt
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45960 5 -     78289 ttggt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45399 5 +     55831 ttggt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43849 5 -     64179 ttggt
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            957 5 -      3959 ttggt
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42474 5 +     45454 ttggt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48123 5 +     70886 ttggt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10296 5 +     30854 ttggt
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34430 5 +     42133 ttggt
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2687 5 +     17741 ttggt
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3312 5 -     15923 ttggt
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673594 5 +   5030052 TTGGT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3588 5 -     16391 ttggt
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3147 5 -     17186 ttggt
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25443 5 -     32367 ttagt
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276186 5 +  21539123 ttggt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12352 5 +     48076 ttggt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7487 5 -     28759 ttggt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35043 5 +     44353 ttggt
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50412 5 -     71267 ttggt
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24470 5 -     33135 ttggt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7754 5 +     11645 tcagt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7762 5 -     19611 tcagt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9277 5 +     28062 tcggt
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44571 5 -     91139 tcggt
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22097 5 +     95584 tcggt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22010 5 +    119600 tcggt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11663 5 +     18648 ttggt
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11178 5 -     13885 ttggt
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3268 5 -      8861 ttggt
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455657 5 + 189096842 ttggt
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3179 5 +      8664 ttggt
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    994 5 -      1607 ttgaa
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272295 3 +    496798 TC--T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29165 5 -     39886 ttagt
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997887 5 +  23392119 ttaaa
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001329 5 +  23407841 ttaaa
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64408 5 -     66877 ttaaa
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6578 5 -     12580 ttggt
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44636 5 +     53515 ttggt
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374391 5 -  26074798 ttggt
i Cebus_albifrons.Contig27                               I 1833 C 0
s Cebus_olivaceus.k141_1404781                                9446 5 -     34880 ttggt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68542 5 -     89041 ttggt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4255 3 -      5494 tc--t
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                142766 5 -   4669795 TCGGT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46505 5 +     47900 tcggt
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1938 5 -     14410 tcggt
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46322 5 -    148725 tcggt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28598 5 -     40656 tcagt
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8557 5 +     20796 tccgt
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13671 5 -     17524 tcagt
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29403 5 -     34525 tcagt
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13183 5 -     25376 ttagt
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365770 5 -  39242232 tcagt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271497 5 +  21565898 ttagt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33862 5 -     45857 tcagt
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28763 5 -     32606 tcagt
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4926 5 +      8499 tcagt
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27324 5 +     70610 tcagt
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24285 5 +     36323 tcagt
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32161 5 -     33796 ttagc
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6664 5 -     15404 tcagc
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10384 5 -     32913 tcggt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20797 5 -     40346 tcggt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21052 5 +    216457 tcggt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20841 5 +     39636 tcggt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240230 5 -   2543920 ttaaa
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            506 5 +      1057 ttggt
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43911 5 -    112038 tcggt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9462 5 +     34062 tcggt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345186 5 +  18827391 ccggt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11725 5 -     44032 ccggt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306572 5 - 135778131 CCGGT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             410984 5 -   2368649 TCGGT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380866 5 - 200372422 tcggt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4423 5 -     84244 tcggt
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646872 5 -   1526836 ttagt
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20067 5 +     50838 ttgaa
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5803 5 +     36344 ttaaa
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29587 5 +     75252 ttaaa
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294067 5 +  12879189 tcagt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100297 5 -    115145 ttaaa
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952049 5 -  37912305 ttagt
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6979 5 -     10735 ttagt
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10686 5 +     14636 TTAAA
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Erythrocebus_patas.Contig38                               264715 5 +  21539334 ccggt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16283 5 -     24895 tcagt
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43993 5 -     70999 tcagt
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87963 5 +    112731 tcagt
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44526 5 +     68309 tcagt
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54850 5 -     65740 tcagt
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25483 5 -     75513 tcagt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49677 5 -     97555 tcagt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6401 5 +     30972 tcagt
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44121 5 -     52037 tcagt
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60524 5 -    111500 tcagt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923631 5 -   3816255 ttaaa
i Fukomys_damarensis.KN121974.1                          I 184 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2663 5 -     28519 tcagt
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2804 5 -      6791 ttaat
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3586045                              19408 5 -     19819 tcggt
i Gorilla_beringei.k141_3586045                          I 68 I 9
s Gorilla_gorilla.LT578341.1                                257829 5 - 186649187 tcggt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_71094                     288 5 +     16254 TTGGT
i Graphiurus_murinus.GraMur_scaffold_71094               n 14 C 0
s Hapalemur_alaotrensis.k141_330369                          16208 5 -     40692 tcagt
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37607 5 +     49394 tcagt
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62478 5 -     66874 tcagt
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11349 5 -     42923 tcagt
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18351 5 -     53142 tcagt
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934018 5 -  22651954 ttata
i Heterocephalus_glaber.JH602082.1                       I 157 C 0
s Hoolock_leuconedys.ctg274                                    144300 5 -    630532 tcagt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73277 5 +    143317 ttaaa
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7331 5 +     12352 tcagt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14515 5 +     55766 tcagt
i Hylobates_klossii.k141_738755                          C 0 I 70
s Hylobates_pileatus_b.LG02                                       2054115 5 + 191637585 tcagt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802993 5 +  11177569 tcagt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8623 5 -    135385 ttaaa
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388337 5 +   7955117 ttagt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3896 5 +     11955 tcagt
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44737 5 +    110728 ttggt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14761005 5 +  30322482 tcagt
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5637 5 -     13097 ttggt
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5391 5 +      5940 ttggt
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5214 5 -      5717 ttggt
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      366 5 +      8855 ttggt
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5168 5 -     13645 ttggt
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10521 5 +     29618 tcagt
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10517 5 +     31569 tcagt
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10527 5 +     24756 tcagt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10527 5 +     16388 tcagt
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               335648 5 -   1826925 tcggt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47040 5 -     61512 tcggt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374702 5 -  60120075 tcggt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26970 5 +     30207 tcggt
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1808 5 -      5035 tcggt
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26923 5 +     30527 tcggt
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38099 5 -     50087 tcggt
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47843 5 +     51645 tcggt
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417046 5 - 187317192 TCGGT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401276 5 +  25927173 TCGGT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50448 5 -     62418 tcggt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2979 5 +     14901 tcggt
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46920 5 +     59329 tcggt
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272828 5 +    668171 tcggt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1460 5 -      5049 tcggt
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4626 5 +     17132 tcggt
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324116 5 +  24302211 tcggt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358947 5 -    752769 tcggt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502550 5 +  40650429 ttagt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_582562                                11761 5 +     17804 ttggt
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12261 5 -     12984 ttggt
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20580 5 -     26561 ttggt
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986359 5 +  93316391 TCAGC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24214 5 -     27822 tcggt
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54134 5 -     62432 tcagt
i Mirza_zaza.k141_766280                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560                900 5 -    124358 TTGGT
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64582 5 +     67721 TTAAA
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              30991 5 +     34575 tcggt
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55231 5 -    132029 tcagt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11326 5 -     16345 tcagt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17211 5 +     22201 tcagt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415432 5 -  22158432 tcagt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27609 5 -     54323 tcagt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Octodon_degus.JH651603.1                                11056677 5 -  11899542 ctgaa
i Octodon_degus.JH651603.1                               C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  626 5 +      1339 tcggt
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.KZ622849.1                                 36565 5 -    110857 tcggt
i Pan_troglodytes.KZ622849.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   245125 5 - 183742232 TCGGT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11410 5 +     21308 tcggt
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294153 5 -  20919399 tcggt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24050 5 -     27687 tcggt
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     729 5 +     10553 tcggt
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   689 5 -     10386 tcggt
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3390 5 +      9367 ttaat
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Piliocolobus_badius.k141_2704958                            4373 5 +     55023 tcggt
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3895 5 -     89929 tcggt
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4485 5 +     40849 tcggt
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256215 5 +  14605196 TCGGT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66279 5 +    207309 tcagt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7367 5 -     25401 tcggt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33115 5 +     58159 tcagt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33391 5 +     63561 tcagt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33151 5 +     51148 tcagt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558121 5 -   4542175 tgggc
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33135 5 +     51125 tcagt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9553 5 +     39866 tcggt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4635 5 -      9282 tcggt
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44039 5 -     87950 tcggt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44433 5 -     88961 tcggt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9131 5 -     39403 tcggt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44082 5 +     87928 tcggt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9130 5 -     60166 tcggt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16067 5 -     67232 tcggt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          43983 5 -     90634 tcggt
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45450 5 +     89403 tcggt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   180985 5 - 189387572 TTGGT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195725 5 -   9816681 ttggt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29573 5 +     69807 tcggt
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46754 5 -     80239 tcggt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984153 5 +   4620579 tcagt
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567648 5 -   2598838 tcagt
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5286 5 -      7103 tcagt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5883 5 -     11706 tcagt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9620 5 -     30655 tcagt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35934 5 +     46564 tcagt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96213 5 -     98465 tcagt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9852 5 +     35169 tcagt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28940 5 +     91421 tcggt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155492 5 -   7812017 tcggt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9797 5 +     72585 tcggt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3404 5 +      7119 tcggt
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124074 5 + 195417433 TCGGT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238246 5 -   7961872 tcggt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2012906                                506 5 -      1130 ttggt
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5403 5 +      6077 ttggt
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5497 5 +      5971 ttgct
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5414 5 +      5932 ttggt
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3759 5 -      4390 ttggt
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393516 5 - 209938924 ttggt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5362 5 +      5979 ttgct
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1932 5 -     22275 ttggt
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110532 5 + 121099817 TTGGT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32099 5 -     47369 ttggt
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32485 5 -     79414 ttggt
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29176 5 -     34454 ttggt
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16577 5 -     22428 ttggt
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31731 5 -     47109 ttggt
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239766 5 +   5703754 ttggt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9356 5 +     21866 ttggt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                           379 5 +     11297 tcggt
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30772 5 +     58920 tcggt
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17270 5 -     45317 tcggt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24928 5 -     42441 tcggt
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27604 5 -     29113 tcggt
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30681 5 -     48123 tcggt
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869915 5 +   3870691 ttagt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392697 5 +   1523678 tcagt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2208 3 +      9917 tc--t
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9006 3 +     20590 tc--t
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354934 5 - 186847797 TCGGT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25764 5 -     33621 ttaat
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 167 C 0
s Trachypithecus_auratus.k141_1189070                        22682 5 +     26378 tcggt
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35481 5 -     78344 tcggt
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22007 5 +     25722 tcggt
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30437 5 -     62838 tcggt
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30426 5 +     46913 tcggt
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11165 5 -     28527 tcggt
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32372 5 -     64340 tcggt
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30410 5 -     63452 tcggt
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11857 5 +     22490 tcggt
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5223 5 -      6147 tcggt
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12136 5 -     13050 tcggt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257300 5 -   6242583 tcggt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3396 5 +     19340 tcggt
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836629 5 -   4065304 tcagg
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10660 5 -     70247 tcagg
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  26806 5 -     30710 tcagt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25713 5 -    147434 tcagt
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175671 5 -    224448 ttagt
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156 0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Petromus_typicus.PetTyp_scaffold_17301                     33439 137 -     56120 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380 0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524 0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699 0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797 0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738 0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532 0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953 0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316 3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971 0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992 0 +  89631738 C
e Mus_musculus.chr8                                       41689686 0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513 0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334 0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274 0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506 0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850 0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914 0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042 0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275 0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536 2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700 0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8534 9 +     36723 gcctgctga
s Allenopithecus_nigroviridis.k141_3755588                   49689 9 +     53615 gcctgctga
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1716 9 +     13857 gcctgctga
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18271 9 -     21945 gcctgctga
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19956 9 +     32033 gcctgctga
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73726 9 -     84148 gcctaccga
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45965 9 -     78289 gcctaccga
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45404 9 +     55831 gcctaccga
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43854 9 -     64179 gcctaccga
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            962 9 -      3959 gcctaccga
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42479 9 +     45454 gcctaccga
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48128 9 +     70886 gcctaccga
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10301 9 +     30854 gcctaccga
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34435 9 +     42133 gcctaccga
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2692 9 +     17741 gcctactga
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3317 9 -     15923 gcctactga
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673599 9 +   5030052 GCCTACTGA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3593 9 -     16391 gcctactga
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3152 9 -     17186 gcctactga
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25448 9 -     32367 gtctgatga
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276191 9 +  21539123 gcctcctga
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12357 9 +     48076 gcctcctga
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7492 9 -     28759 gcctcctaa
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35048 9 +     44353 gcctcctga
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50417 9 -     71267 gcctcctga
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24475 9 -     33135 gcctcctga
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7759 9 +     11645 gtctgatga
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7767 9 -     19611 gtctgatga
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9282 9 +     28062 gcctgctga
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44576 9 -     91139 gcctgctga
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22102 9 +     95584 gcctgctga
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22015 9 +    119600 gcctgctga
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11668 9 +     18648 gcctactga
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11183 9 -     13885 gcctactga
i Callimico_goeldii.k141_1609886                         C 0 I 2
s Callithrix_geoffroyi.k119_459277                            3273 9 -      8861 gcctactga
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455662 9 + 189096842 gcctactga
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3184 9 +      8664 gcctactga
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    999 9 -      1607 attggatga
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272298 9 +    496798 GTCTATTGA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29170 9 -     39886 gtcttatga
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997892 7 +  23392119 actgggg--
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001334 7 +  23407841 actgggg--
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64413 7 -     66877 actgggg--
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6583 9 -     12580 gcctactga
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44641 9 +     53515 gcctactga
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374396 9 -  26074798 gcctactga
i Cebus_albifrons.Contig27                               C 0 T 1830
s Cebus_olivaceus.k141_1404781                                9451 9 -     34880 gcctactga
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68547 9 -     89041 gcctactga
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4258 9 -      5494 gtctactga
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                142771 9 -   4669795 GCCTGCTGA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46510 9 +     47900 gcctgctga
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1943 9 -     14410 gcctgctga
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46327 9 -    148725 gcctgctga
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28603 9 -     40656 gcctgctga
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8562 9 +     20796 gcctgctga
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13676 9 -     17524 gcctgctga
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29408 9 -     34525 gcctgctga
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13188 9 -     25376 gcctgctga
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365775 9 -  39242232 gcctgctga
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271502 9 +  21565898 gcctgctga
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33867 9 -     45857 gcctgctga
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28768 9 -     32606 gcctgctga
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4931 9 +      8499 gcctgccga
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27329 9 +     70610 gcctgctga
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24290 9 +     36323 gcctgctga
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32166 9 -     33796 gtctgatga
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6669 9 -     15404 atctgatga
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10389 9 -     32913 gcctgctga
i Cheracebus_lucifer.k141_2312002                        C 0 I 2
s Cheracebus_lugens.k141_1179667                             20802 9 -     40346 gcctgctga
i Cheracebus_lugens.k141_1179667                         C 0 I 2
s Cheracebus_regulus.k141_471822                             21057 9 +    216457 gcctgctga
i Cheracebus_regulus.k141_471822                         C 0 I 2
s Cheracebus_torquatus.k141_890198                           20846 9 +     39636 gcctgctga
i Cheracebus_torquatus.k141_890198                       C 0 I 2
s Chinchilla_lanigera.JH722012.1                           1240235 9 -   2543920 attggatga
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            511 9 +      1057 gcctactga
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43916 9 -    112038 gcctgctga
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9467 9 +     34062 gcctgctga
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345191 9 +  18827391 gcctgctga
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11730 9 -     44032 gcctgctga
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306577 9 - 135778131 GCCCGCTGA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             410989 9 -   2368649 GCCTGCTGA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380871 9 - 200372422 gcctgctga
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4428 9 -     84244 gcctgctga
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646877 9 -   1526836 atctgatga
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20072 9 +     50838 actggatga
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5808 9 +     36344 attggataa
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29592 9 +     75252 attggataa
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294072 9 +  12879189 gtccgatga
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100302 9 -    115145 attggatga
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952054 9 -  37912305 gccctgtga
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6984 9 -     10735 gccctgtga
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10691 7 +     14636 ATTGGGT--
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Erythrocebus_patas.Contig38                               264720 9 +  21539334 gcctgctga
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16288 9 -     24895 gtctgatga
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43998 9 -     70999 gtctgatga
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87968 9 +    112731 gtctgatga
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44531 9 +     68309 gtctgatga
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54855 9 -     65740 gtctgatga
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25488 9 -     75513 gtctgatga
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49682 9 -     97555 gtctgatga
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6406 9 +     30972 gtctgatga
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44126 9 -     52037 gtctgatga
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60529 9 -    111500 gtctgatga
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923636 9 -   3816255 atatgatgg
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2668 9 -     28519 gtctggtga
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2809 9 -      6791 atctgataa
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_420802                                 955 9 -      1361 gcctgctga
i Gorilla_beringei.k141_420802                           I 5 I 81
s Gorilla_gorilla.LT578341.1                                257834 9 - 186649187 gcctgctga
i Gorilla_gorilla.LT578341.1                             C 0 I 45
s Graphiurus_murinus.GraMur_scaffold_71094                     293 9 +     16254 GTCTGGGGA
i Graphiurus_murinus.GraMur_scaffold_71094               C 0 T 9
s Hapalemur_alaotrensis.k141_330369                          16213 9 -     40692 gtctgatga
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37612 9 +     49394 gtctgatga
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62483 9 -     66874 gtctgatga
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11354 9 -     42923 gtctgatga
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18356 9 -     53142 gtctgatga
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934023 9 -  22651954 atctgatga
i Heterocephalus_glaber.JH602082.1                       C 0 I 12
s Hoolock_leuconedys.ctg274                                    144305 9 -    630532 gcctgctga
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73282 7 +    143317 attgggt--
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7336 9 +     12352 gcctgctga
i Hylobates_agilis.k141_1155965                          C 0 I 69
s Hylobates_klossii.k141_738755                              14590 9 +     55766 gcctgctga
i Hylobates_klossii.k141_738755                          I 70 C 0
s Hylobates_pileatus_b.LG02                                       2054120 9 + 191637585 gcctgctga
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802998 9 +  11177569 gcctgctga
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8628 9 -    135385 atctgatga
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388342 9 +   7955117 gtctaatga
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3901 9 +     11955 gtctaatga
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44742 9 +    110728 gcctcctga
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14761010 9 +  30322482 gtctgatga
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5642 9 -     13097 gcctactga
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5396 9 +      5940 gcctactga
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5219 9 -      5717 gcctactga
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      371 9 +      8855 gcctaccga
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5173 9 -     13645 gcctaccga
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10526 9 +     29618 gtctgatga
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10522 9 +     31569 gtctgatga
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10532 9 +     24756 gtctgatga
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10532 9 +     16388 gtctgatga
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               335653 9 -   1826925 gcctgctga
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47045 9 -     61512 gcctgctga
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374707 9 -  60120075 gcctgctga
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26975 9 +     30207 gcctgctga
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1813 9 -      5035 gcctgctga
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26928 9 +     30527 gcctgctga
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38104 9 -     50087 gcctgctga
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47848 9 +     51645 gcctgctga
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417051 9 - 187317192 GCCTGCTGA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401281 9 +  25927173 GCCTGCTGA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50453 9 -     62418 gcctgctga
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2984 9 +     14901 gcctgctga
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46925 9 +     59329 gcctgctga
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272833 9 +    668171 gcctgctga
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1465 9 -      5049 gcctgctga
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4631 9 +     17132 gcctgctga
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324121 9 +  24302211 gcctgctga
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358952 9 -    752769 gcctgctga
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502555 9 +  40650429 gtctaatga
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_582562                                11766 9 +     17804 gcctactga
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12266 9 -     12984 gcctactga
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20585 9 -     26561 gcctactga
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986364 9 +  93316391 ATCTGATGA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24219 9 -     27822 gcctgctga
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54139 9 -     62432 gtctgatga
i Mirza_zaza.k141_766280                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560                905 9 -    124358 GTCTGATGA
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64587 9 +     67721 GTTGGATGA
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              30996 9 +     34575 gcctgctga
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55236 9 -    132029 gcctgctga
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11331 9 -     16345 gcctgctga
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17216 9 +     22201 gcctgctga
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415437 9 -  22158432 gcctgctga
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27614 9 -     54323 gcctgctga
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Octodon_degus.JH651603.1                                11056682 9 -  11899542 attggatga
i Octodon_degus.JH651603.1                               C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  631 9 +      1339 ggctgctga
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.KZ622849.1                                 36570 9 -    110857 ggctgctga
i Pan_troglodytes.KZ622849.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   245130 9 - 183742232 GCCTGCTGA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11415 9 +     21308 gcctgctga
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294158 9 -  20919399 gcctgctga
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24055 9 -     27687 gcctgctga
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     734 9 +     10553 gcctgctga
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   694 9 -     10386 gcctgctga
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3395 9 +      9367 gccctgtga
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Piliocolobus_badius.k141_2704958                            4378 9 +     55023 gcctgctga
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3900 9 -     89929 gcctgctga
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4490 9 +     40849 gcctgctga
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256220 9 +  14605196 GCCTGCTGA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66284 9 +    207309 gcctgctga
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7372 9 -     25401 gcctgctga
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33120 9 +     58159 gcctgctga
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33396 9 +     63561 gcctgctga
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33156 9 +     51148 gcctgctga
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558126 9 -   4542175 gcctgctga
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33140 9 +     51125 gcctgctga
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9558 9 +     39866 gcctgctga
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 2
s Plecturocebus_brunneus.k141_862875                          4640 9 -      9282 gcctgctga
i Plecturocebus_brunneus.k141_862875                     C 0 I 2
s Plecturocebus_caligatus.k141_1382851                       44044 9 -     87950 gcctgctga
i Plecturocebus_caligatus.k141_1382851                   C 0 I 2
s Plecturocebus_cinerascens.k141_1164729                     44438 9 -     88961 gcctgctga
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 2
s Plecturocebus_cupreus.k141_2351393                          9136 9 -     39403 gcctgctga
i Plecturocebus_cupreus.k141_2351393                     C 0 I 2
s Plecturocebus_dubius.k141_1058799                          44087 9 +     87928 gcctgctga
i Plecturocebus_dubius.k141_1058799                      C 0 I 2
s Plecturocebus_grovesi.k141_2013005                          9135 9 -     60166 gcctgctga
i Plecturocebus_grovesi.k141_2013005                     C 0 I 2
s Plecturocebus_hoffmannsi.k141_3303950                      16072 9 -     67232 gcctgctga
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 2
s Plecturocebus_miltoni.k141_349282                          43988 9 -     90634 gcctgctga
i Plecturocebus_miltoni.k141_349282                      C 0 I 2
s Plecturocebus_moloch.k141_1031110                          45455 9 +     89403 gcctgctga
i Plecturocebus_moloch.k141_1031110                      C 0 I 2
s Pongo_abelii.CM009266.2                                   180990 9 - 189387572 GCCTGCTGA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195730 9 -   9816681 gcctgctga
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29578 9 +     69807 gcctgctga
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46759 9 -     80239 gcctgctga
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984158 9 +   4620579 gtctgatga
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567653 9 -   2598838 gtctgatga
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5291 9 -      7103 gtctgatga
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5888 9 -     11706 gtctgatga
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9625 9 -     30655 gcctgatga
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35939 9 +     46564 gtctgatga
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96218 9 -     98465 gtctgatga
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9857 9 +     35169 gtctgatga
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28945 9 +     91421 gcctgctga
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155497 9 -   7812017 gcctgctga
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9802 9 +     72585 gcctgctga
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3409 9 +      7119 gcctgctga
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124079 9 + 195417433 GCCTGCTGA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238251 9 -   7961872 gcctgctga
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2012906                                511 9 -      1130 gcctactga
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5408 9 +      6077 gcctactga
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5502 9 +      5971 gcctgctga
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5419 9 +      5932 gtctgctga
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3764 9 -      4390 gcctgctga
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393521 9 - 209938924 gcctactga
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5367 9 +      5979 gcctgctga
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1937 9 -     22275 gcctactga
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110537 9 + 121099817 GCCTACTGA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32104 9 -     47369 gcctactga
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32490 9 -     79414 gcctactga
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29181 9 -     34454 gcctactga
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16582 9 -     22428 gcctactga
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31736 9 -     47109 gcctactga
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239771 9 +   5703754 gcctactga
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9361 9 +     21866 gcctactga
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                           384 9 +     11297 gcctgctga
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30777 9 +     58920 gcctgctga
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17275 9 -     45317 gcctgctga
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24933 9 -     42441 gcctgctga
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27609 9 -     29113 gcctgctga
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30686 9 -     48123 gcctgctga
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869920 9 +   3870691 gtctaatga
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392702 9 +   1523678 gcctgctga
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2211 9 +      9917 gtctactgg
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9009 9 +     20590 gtctattgg
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354939 9 - 186847797 GCCTGCTGA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25769 9 -     33621 acctgatga
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22687 9 +     26378 gcctgctga
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35486 9 -     78344 gcctgctga
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22012 9 +     25722 gcctgctga
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30442 9 -     62838 gcctgctga
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30431 9 +     46913 gcctgctga
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11170 9 -     28527 gcctgctga
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32377 9 -     64340 gcctgctga
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30415 9 -     63452 gcctgctga
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11862 9 +     22490 gcctgctga
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5228 9 -      6147 gcctgctga
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12141 9 -     13050 gcctgctga
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257305 9 -   6242583 gcctgctga
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3401 9 +     19340 gcctgctga
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836634 9 -   4065304 gtctaatga
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10665 9 -     70247 gtctaacga
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  26811 9 -     30710 gtctgatga
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25718 9 -    147434 gtctgatga
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175676 9 -    224448 ttctgaaga
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156 0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Petromus_typicus.PetTyp_scaffold_17301                     33439 137 -     56120 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380 0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524 0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699 0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797 0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738 0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532 0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953 0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316 3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971 0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992 0 +  89631738 C
e Mus_musculus.chr8                                       41689686 0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513 0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334 0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274 0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506 0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850 0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914 0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042 0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275 0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536 2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700 0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8543 45 +     36723 gggccca-tgca---tcat---ggatggattcttctg-tatgtcctcatatgg
s Allenopithecus_nigroviridis.k141_3755588                   49698 45 +     53615 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1725 45 +     13857 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18280 45 -     21945 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19965 45 +     32033 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73735 38 -     84148 gggccca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45974 38 -     78289 gggccca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45413 38 +     55831 gggccca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43863 38 -     64179 gggccca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            971 38 -      3959 gggcata-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42488 38 +     45454 gggccca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48137 38 +     70886 gggccca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10310 38 +     30854 gggccca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34444 38 +     42133 gggcaca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2701 14 +     17741 gggccca-ttcc---tca-----------------------------------
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3326 14 -     15923 gggccca-ttcc---tca-----------------------------------
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673608 14 +   5030052 GGGCCCA-TTCC---TCA-----------------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3602 14 -     16391 gggccca-ttcc---tca-----------------------------------
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3161 14 -     17186 gggccca-ttcc---tca-----------------------------------
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25457 40 -     32367 agcagtg-tttc---tcgt---agatggtgacttatt-tgtatcttca-----
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276200 38 +  21539123 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12366 38 +     48076 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7501 38 -     28759 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35057 38 +     44353 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50426 38 -     71267 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24484 38 -     33135 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7768 40 +     11645 gggcctg-gtct---tcag---agttggagacttcta-catgttctca-----
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7776 40 -     19611 gggcctg-gtct---tcag---agttggagacttcta-catgttctta-----
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9291 38 +     28062 gggccca-ttcc---tcat---agatgg--tcttctc-tgtgtcctca-----
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44585 38 -     91139 gggccca-ttcc---tcat---agatgg--tcttccc-tgtgtcctca-----
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22111 38 +     95584 gggccca-ttcc---tcat---agatgg--tcttctc-tgtgtcctca-----
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22024 38 +    119600 gggccca-ttcc---tcat---agatgg--tcttctc-tgtgtcctca-----
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11677 38 +     18648 ggaccac-ttcc---tcat---agttgg--tcttctc-catgtcctca-----
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11194 35 -     13885 ---ccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Callimico_goeldii.k141_1609886                         I 2 C 0
s Callithrix_geoffroyi.k119_459277                            3282 38 -      8861 gggccac-ttcc---tcat---agatgg--ccttctc-catgtcctca-----
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455671 38 + 189096842 gggccac-ttcc---tcat---agatgg--ccttctc-catgtcctca-----
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3193 38 +      8664 gggccac-ttcc---tcat---aggtgg--ccttctc-catgtcctca-----
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1008 37 -      1607 taa-ct-gtttc---ttat---agatgttgcctttta-t--gtccaca-----
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272307 40 +    496798 GTGCTTG-TCCC---TCAA---AGATGAAATTTTCTa-catgtcctca-----
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29179 40 -     39886 gggctgg-tttc---tcac---agatggtgccttcta-tatgtcttca-----
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997899 33 +  23392119 --------tttc---tcat---aggtggtacctttta-tgtgtcctca-----
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001341 33 +  23407841 --------tttc---tcat---aggtggtacctttta-tgcatcctca-----
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64420 33 -     66877 --------tttc---tcat---aggtggtacctttta-tgcatcctca-----
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6592 38 -     12580 gggccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44650 38 +     53515 gggccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  372575 35 -  26074798 ---ccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Cebus_albifrons.Contig27                               T 1830 I 1832
s Cebus_olivaceus.k141_1404781                                9460 38 -     34880 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68556 38 -     89041 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4267 40 -      5494 gcgcttg-ttcc---tcaa---agatgaaattctcta-catgtcctca-----
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                142780 45 -   4669795 GGGCCCA-TTCG---TCAT---AGATGGAGTCTTCtg-tgtgtcctcatatgg
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46519 45 +     47900 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1952 45 -     14410 gggccca-ttcg---tcat---agacggagtcttctg-tgtgtcctcatatgg
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46336 45 -    148725 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28612 45 -     40656 gggccca-tttg---tcat---agatagagtcttctg-tgtgtcctcatatgg
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8571 45 +     20796 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13685 45 -     17524 gggccca-tttg---tcat---agatggagacttctt-tgtgtcctcatatgg
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29417 45 -     34525 gggccca-tttg---tcat---agatggagtcttctg-tgtgtccttatatgg
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13197 45 -     25376 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365784 45 -  39242232 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271511 45 +  21565898 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33876 45 -     45857 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28777 45 -     32606 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4940 45 +      8499 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27338 45 +     70610 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24299 45 +     36323 gggccca-tttg---tcgt---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32175 40 -     33796 gggccca-ttct---tcat---agttagagacttcta-cgtgttctca-----
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6678 40 -     15404 gggccca-ttct---tcat---agttggagacttcta-tgtgttctca-----
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10400 35 -     32913 ---ccca-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Cheracebus_lucifer.k141_2312002                        I 2 C 0
s Cheracebus_lugens.k141_1179667                             20813 35 -     40346 ---ccca-ttcc---tcat---aaacgg--tcttccc-tgtgtcctca-----
i Cheracebus_lugens.k141_1179667                         I 2 C 0
s Cheracebus_regulus.k141_471822                             21068 35 +    216457 ---ccca-ttcc---tcat---agacgg--tcttccc-tgtgccctca-----
i Cheracebus_regulus.k141_471822                         I 2 C 0
s Cheracebus_torquatus.k141_890198                           20857 35 +     39636 ---ccca-ttcc---tcat---agacgg--tcttccc-tgtgccctca-----
i Cheracebus_torquatus.k141_890198                       I 2 C 0
s Chinchilla_lanigera.JH722012.1                           1240244 32 -   2543920 agacct-attcc---tc-----------tacctttca-tgtgtcttca-----
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            520 38 +      1057 gggccag-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43925 38 -    112038 gggccca-ttcc---tcat---agatgg--tcttctc-tgtgtcctca-----
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9476 38 +     34062 gggccca-ttcc---tcat---agatgg--tcttctc-tgtgtcctca-----
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345200 45 +  18827391 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11739 45 -     44032 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306586 44 - 135778131 GGGCCCA-TTTG---TCAT---AGATGGAGTCTTCTG-tg-gtcctcacatgg
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             410998 45 -   2368649 GGTCCCA-TTCG---TCAT---AGATGGAGTCTTCtg-tgtgtcctcatatgg
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380880 45 - 200372422 ggtccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4437 45 -     84244 ggtccca-ttcg---tcat---agatggagtcttcta-tgtgtcctcatatgg
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646886 39 -   1526836 agcctgt-ttcc---tcat---agac-gtaccttcca-cgagttcttt-----
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20081 37 +     50838 aaa-ct-gtttc---ttat---agatgatacctttta-t--gtcctca-----
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5817 40 +     36344 agacct-gttcc---tcat---agatggtagctttta-tgtgtgtaca-----
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29601 40 +     75252 agacct-atttc---tcat---agatggttccttttc-tgtgtcctca-----
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294081 40 +  12879189 gggcctg-tttt---tcat---agttggagacgtcta-tgtgttctca-----
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100311 40 -    115145 agactt-gttcc---tcat---aggtggtacctttta-tgtgtcttca-----
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952063 37 -  37912305 gggtc----ttc---taac---agaagatgcctttgg-tgtgtcgtca-----
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6993 37 -     10735 gggtc----ttc---taac---agaagatgcctttgg-tgtgtcgtca-----
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10698 33 +     14636 --------TTTC---Ccat---agatggtatctttaa-tgcatcctca-----
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Erythrocebus_patas.Contig38                               264729 43 +  21539334 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctc--atgg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16297 37 -     24895 gggcctg----t---tcat---agttggagacttcta-catgttctca-----
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               44007 37 -     70999 gggcctg----t---tcat---agttggagacttcta-catgttctca-----
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87977 37 +    112731 gggcctg-ttc------at---agttggagacttcta-catgttctca-----
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44540 37 +     68309 gggcctg-ttc------at---agttggagacttcta-catgttctcc-----
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54864 37 -     65740 gggcctg----t---tcat---agttggagacttcta-catgttctca-----
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25497 36 -     75513 gggccg-----t---tcat---agttggagacttcta-catgttctcc-----
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49691 37 -     97555 gggcctg----t---tcat---agttggagacttcta-catgttctca-----
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6415 37 +     30972 gggcctg----t---tcat---agttggagacttcta-catgttctca-----
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44135 37 -     52037 gggcctg----t---tcat---agttggagacttcta-catgttctca-----
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60538 37 -    111500 gggcctg----t---tcat---agttggagacttcta-catgttctca-----
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923645 40 -   3816255 aggcct-gtttcttg---t---agatggtaccattta-tgtattttca-----
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2677 40 -     28519 gggcctg-ttcc---tcac---agatgtggccatcta-tgtgtcctca-----
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2818 40 -      6791 ggacctg-tttc---tcat---agatggtgccttctt-catgtcctca-----
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3586045                              19422 45 -     19819 gggccca-ttca---tcat---agatggagtcttctg-tacgtcctcatatgg
i Gorilla_beringei.k141_3586045                          I 9 C 0
s Gorilla_gorilla.LT578336.1                                 74339 45 +  33314783 gggccca-ttca---tcat---agatggagtcttctg-tatgtcctcatatgg
i Gorilla_gorilla.LT578336.1                             I 153 I 36
s Graphiurus_murinus.GraMur_scaffold_10447                    3887 40 -     78134 cgatctg-tttc---tcat---agatggtgccttctt-catgtcctca-----
i Graphiurus_murinus.GraMur_scaffold_10447               I 14 C 0
s Hapalemur_alaotrensis.k141_330369                          16222 40 -     40692 gggcctg-ttct---tcat---agttggagacttcta-catgttctca-----
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37621 40 +     49394 gggcctg-ttct---tcat---agttggagacttcta-catgttctca-----
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62492 40 -     66874 gggcctg-ttct---tcat---agttggagacttcta-catgttctca-----
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11363 40 -     42923 gggcctg-ttct---tcat---agttggagacttcta-catgttctca-----
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18365 40 -     53142 gggcctg-ttct---tcat---agttggagacttcta-catgttctca-----
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934044 22 -  22651954 -------------------------tggtacatttta-tgtgttttca-----
i Heterocephalus_glaber.JH602082.1                       I 12 C 0
s Hoolock_leuconedys.ctg274                                    144314 45 -    630532 gggccca-ttcg---tcat---agatggagtcttctg-tatgtcctcatatgg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73289 31 +    143317 --------tttc---tcat---agatggtacctttta-tgtgtcct-------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7414 45 +     12352 aggccca-ttcg---tcat---agatggagtcttctg-tatgtcctcatatgg
i Hylobates_agilis.k141_1155965                          I 69 C 0
s Hylobates_klossii.k141_738755                              14599 45 +     55766 gggccca-ttcg---tcat---agatggagtcttctg-tatgtcctcatatgg
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054129 45 + 191637585 gggccca-ttcg---tcat---agatggagtcttctg-tatgtcctcatatgg
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803007 45 +  11177569 gggccca-ttcg---tcat---agatggagtcttctg-tatgtcctcatatgg
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8637 38 -    135385 aggcct-gtttc---tcat---agatggtacctttta-tgtgtc--ta-----
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388351 40 +   7955117 ggaagta-tttc---ttaa---agacggtgacttctt-tgtatcctca-----
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3910 40 +     11955 gggccta-gtct---tcag---agttggagacttcta-cgagttctca-----
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44751 38 +    110728 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14761019 40 +  30322482 ggacctg-ttct---tcat---agctggagacttcta-catgttctca-----
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5651 38 -     13097 gggccag-ttcc---tcat---agatgg--ttttctc-tatgtcctca-----
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5405 38 +      5940 gggccag-ttcc---tcat---agatgg--ttttctc-tatgtcctca-----
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5228 38 -      5717 gggccag-ttcc---tcat---agatgg--ttttctc-tatgtcctca-----
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      380 38 +      8855 gggccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5182 38 -     13645 gggccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10535 40 +     29618 gggcctg-ttct---tcag---agttggagacttcta-tgtgttctca-----
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10531 40 +     31569 gggcctg-ttct---tcag---agttggagacttcta-tgtgttctca-----
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10541 40 +     24756 gggcctg-ttct---tcag---agttggaggcttcta-cgtgttctca-----
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10541 40 +     16388 gggcctg-ttct---tcag---agttggagacttcta-tgtgttctca-----
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               335662 45 -   1826925 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47054 45 -     61512 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374716 45 -  60120075 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26984 45 +     30207 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1822 45 -      5035 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26937 45 +     30527 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38113 45 -     50087 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47857 45 +     51645 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417060 45 - 187317192 GGGCCCA-TTCG---TCAT---AGATGGAGTCTTCtg-tgtgtcctcatatgg
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401290 45 +  25927173 GGGCCCA-TTCG---TCAT---AGATGGAGTCTTCtg-tgtgtcctcatatgg
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50462 45 -     62418 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2993 45 +     14901 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46934 45 +     59329 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272842 45 +    668171 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1474 45 -      5049 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4640 45 +     17132 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324130 45 +  24302211 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358961 45 -    752769 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502564 40 +  40650429 ggaagta-tttc---tcat---agacggtgacttcat-tgtatcctca-----
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_582562                                11775 38 +     17804 gggccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12275 38 -     12984 gggccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20594 38 -     26561 gggccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986373 40 +  93316391 GGGCCCA-TTCT---TCAT---AGTTGAAGACTTCTa-cgtgttctca-----
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24228 45 -     27822 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54148 40 -     62432 gggccca-ttct---tcat---agttggagacttcta-catgttctca-----
i Mirza_zaza.k141_766280                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560                914 40 -    124358 GGACCTG-TTTC---TCAT---AGATGGTGCCTTCTT-CATGTCTTCA-----
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64596 37 +     67721 TAA-ct-gtttc---ttat---agatgataccttcta-t--gtccaca-----
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              31005 45 +     34575 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55245 45 -    132029 gggccca-ttca---tcat---agatggaatcttctg-tatgtcctcatatgg
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11340 45 -     16345 gggccca-ttca---tcat---agatggaatcttctg-tatgtcctcatatgg
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17225 45 +     22201 gggccca-ttca---tcat---agatggaatcttctg-tatgtcctcatatgg
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415446 45 -  22158432 gggccca-ttca---tcat---agatggaatcttctg-tatgtcctcatatgg
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27623 45 -     54323 gggccca-ttca---tcat---agatggaatcttctg-tatgtcctcatatgg
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Octodon_degus.JH651603.1                                11056691 37 -  11899542 aaa-ct-ttttc---ttat---agatggtacctttta-t--atcctca-----
i Octodon_degus.JH651603.1                               C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  640 45 +      1339 gggccca-ttca---tcat---agatggagtcttCTG-TATGTCCTCATATGG
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.KZ622849.1                                 36579 45 -    110857 gggccca-ttca---tcat---agatggagtcttctG-TATGTCCTCATATgg
i Pan_troglodytes.KZ622849.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   245139 45 - 183742232 GGGCCCA-TTCG---TCAT---AGATGGAGTCTTCtg-tgtgtcctcatatgg
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11424 45 +     21308 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294167 45 -  20919399 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24064 45 -     27687 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     743 45 +     10553 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   703 45 -     10386 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3404 37 +      9367 gggcc----ttc---taac---agaaggtgtcttcgg-tgtgttgtca-----
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33576 25 -     56120 ----------------------aaatggtacctttta-tatgctttcc-----
i Petromus_typicus.PetTyp_scaffold_17301                 I 137 C 0
s Piliocolobus_badius.k141_2704958                            4387 45 +     55023 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3909 45 -     89929 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4499 45 +     40849 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256229 45 +  14605196 GGTCCTG-TTCG---TCAT---AGATGGAGTCTTCtg-tgtgtcctcatatgg
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66293 38 +    207309 gggccca-ttcc---tcat---agatgt--tcttttc-tgtgtcctca-----
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7381 38 -     25401 gggccca-ttcc---tcat---agatgt--tcttttc-tgtgtcctca-----
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33129 38 +     58159 gggccca-ttcc---tcat---agatgt--tcttttc-tgtgtcctca-----
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33405 38 +     63561 gggccca-ttcc---tcat---agatgt--tcttttc-tgtgtcctca-----
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33165 38 +     51148 gggccca-ttcc---tcat---agatgt--tcttttc-tgtgtcctca-----
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558135 38 -   4542175 gggccca-ttcc---tcat---agatgt--tcttttc-tgtgtcctca-----
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33149 38 +     51125 gggccca-ttcc---tcat---agatgt--tcttttc-tgtgtcctca-----
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9569 35 +     39866 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_bernhardi.k141_2549090                   I 2 C 0
s Plecturocebus_brunneus.k141_862875                          4651 35 -      9282 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_brunneus.k141_862875                     I 2 C 0
s Plecturocebus_caligatus.k141_1382851                       44055 35 -     87950 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_caligatus.k141_1382851                   I 2 C 0
s Plecturocebus_cinerascens.k141_1164729                     44449 35 -     88961 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_cinerascens.k141_1164729                 I 2 C 0
s Plecturocebus_cupreus.k141_2351393                          9147 35 -     39403 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_cupreus.k141_2351393                     I 2 C 0
s Plecturocebus_dubius.k141_1058799                          44098 35 +     87928 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_dubius.k141_1058799                      I 2 C 0
s Plecturocebus_grovesi.k141_2013005                          9146 35 -     60166 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_grovesi.k141_2013005                     I 2 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16083 35 -     67232 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_hoffmannsi.k141_3303950                  I 2 C 0
s Plecturocebus_miltoni.k141_349282                          43999 35 -     90634 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_miltoni.k141_349282                      I 2 C 0
s Plecturocebus_moloch.k141_1031110                          45466 35 +     89403 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_moloch.k141_1031110                      I 2 C 0
s Pongo_abelii.CM009266.2                                   180999 45 - 189387572 GAGCCCA-TTCA---TCAT---AGATGGAGTCTTCTg-tgtgtcctcatgtgg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195739 45 -   9816681 gagccca-ttca---tcat---agatggagtcttctg-tgtgtcctcatgtgg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29587 45 +     69807 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46768 45 -     80239 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984167 40 +   4620579 gggcctg-ttCT---TCAT---AGTTGGAGACTTCTA-catgttctca-----
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567662 40 -   2598838 gggcctg-gtCT---TCAG---AGTTGGAGACTTCTA-CATGTTCTCA-----
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5300 40 -      7103 gggcctg-gtct---tcag---agttggagacttcta-catgttctca-----
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5897 40 -     11706 gggcctg-gtct---tcag---agttggagacttcta-catgttctca-----
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9634 40 -     30655 gggcctg-gtct---tcag---agttggagacttcta-catgttctca-----
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35948 40 +     46564 gggcctg-gtct---tcag---agttggagacttcta-catgttctca-----
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96227 40 -     98465 gagcctg-gtat---tcag---agttggagacttcta-catgttctca-----
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9866 40 +     35169 gggcctg-gtat---tcag---agttggagacttcta-catgttctca-----
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28954 45 +     91421 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155506 45 -   7812017 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9811 45 +     72585 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3418 45 +      7119 ggtcccg-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124088 45 + 195417433 GGTCCCG-TTCG---TCAT---AGATGGAGTCTTCTg-tgtgtcctcatatgg
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238260 45 -   7961872 ggtcccg-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2012906                                520 38 -      1130 gggccag-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5417 38 +      6077 gggccag-ttcc---tcac---agatgg--tcttctc-tatgtcctca-----
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5511 38 +      5971 gggccac-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5428 38 +      5932 gggccag-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3773 38 -      4390 gggccag-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393530 38 - 209938924 gggccag-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5376 38 +      5979 gggccac-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1946 38 -     22275 gggccag-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110546 38 + 121099817 GGGCCCA-TTCC---TCAT---AGATGA--TCTTCTC-TATGTCTTCA-----
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32113 38 -     47369 gggccca-ttcc---tcat---agatga--tcttctc-tatgtcttca-----
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32499 38 -     79414 gggccca-ttcc---tcat---agatga--tcttctc-tatgtcttca-----
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29190 38 -     34454 gggccca-ttcc---tcat---agatga--tcttctc-tatgtcttca-----
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16591 38 -     22428 gggccca-ttcc---tcat---agatga--tcttctc-tatgtcttca-----
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31745 38 -     47109 gggccca-ttcc---tcat---agatga--tcttctc-tatgtcttca-----
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239780 38 +   5703754 gggccca-ttcc---tcag---agatgg--tcttctc-tatgtcctca-----
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9370 38 +     21866 gggccca-ttcc---tcag---agatgg--tcttctc-tatgtcctca-----
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                           393 45 +     11297 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgttctcatatgg
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30786 45 +     58920 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17284 45 -     45317 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24942 45 -     42441 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27618 45 -     29113 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30695 45 -     48123 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgttctcatatgg
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869929 40 +   3870691 ggaagta-tttc---tcat---agacggtgacttctt-tgtatcctca-----
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392711 45 +   1523678 gggccca-ttca---tcat---agatggaatcttctg-tatgtcctcatatgg
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2220 40 +      9917 gcgcctg-ttcc---tcaa---agatgaaattttcta-cctgtcctca-----
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9018 40 +     20590 gcgcctg-ttcc---tcaa---agatgaaattttcta-cctgtcctca-----
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354948 45 - 186847797 GGGCCCA-TTCG---TCAT---AGATGGAGTCTTCtg-tgtgtcctcatatgg
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25778 40 -     33621 agtcct-gtctt------tcatagatagtacctttta-tatgttttca-----
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22696 45 +     26378 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgccctcatatgg
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35495 45 -     78344 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgccctcatatgg
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22021 45 +     25722 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgccctcatatgg
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30451 45 -     62838 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30440 45 +     46913 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11179 45 -     28527 ggtcccg-ttcg---ccgt---agatggagtcttctc-tgtgccctcatatgg
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32386 45 -     64340 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30424 45 -     63452 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11871 45 +     22490 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5237 45 -      6147 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12150 45 -     13050 ggtcccg-ttcg---ccgt---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257314 45 -   6242583 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgccctcatatgg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3410 45 +     19340 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836643 41 -   4065304 gggccta-atca---tcat---agatggctccttctatcgtgtcctca-----
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10674 41 -     70247 gggccta-gtca---tcat---agatagcaccttctattgggtcctca-----
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  26820 37 -     30710 gggcctg----t---ccat---agttggagacttcta-catgttctca-----
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25727 37 -    147434 gggcctg----t---ccat---agttggagacttcta-catgttctca-----
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175685 40 -    224448 agaaatg-ttta---tcat---agatggtgacttctt-tgtatcttca-----
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156  0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380  0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524  0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699  0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316  3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992  0 +  89631738 C
e Mus_musculus.chr8                                       41689686  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513  0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334  0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274  0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700  0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8588 33 +     36723 cagcagtAGACTCGGTGCCTGCTGAGAGCCAAT
s Allenopithecus_nigroviridis.k141_3755588                   49743  1 +     53615 c--------------------------------
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1770  1 +     13857 c--------------------------------
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18325  1 -     21945 c--------------------------------
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20010  1 +     32033 c--------------------------------
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Cercocebus_atys.KQ010504.1                                142825  1 -   4669795 c--------------------------------
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46564  1 +     47900 c--------------------------------
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1997  1 -     14410 c--------------------------------
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46381  1 -    148725 c--------------------------------
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28657  1 -     40656 c--------------------------------
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8616  1 +     20796 c--------------------------------
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13730  1 -     17524 c--------------------------------
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29462  1 -     34525 c--------------------------------
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13242  1 -     25376 c--------------------------------
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365829  1 -  39242232 c--------------------------------
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271556  1 +  21565898 c--------------------------------
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33921  1 -     45857 c--------------------------------
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28822  1 -     32606 c--------------------------------
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4985  1 +      8499 c--------------------------------
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27383  1 +     70610 c--------------------------------
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24344  1 +     36323 c--------------------------------
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chlorocebus_aethiops.ctg25                                345245  1 +  18827391 c--------------------------------
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11784  1 -     44032 c--------------------------------
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306630  1 - 135778131 c--------------------------------
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411043  1 -   2368649 c--------------------------------
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380925  1 - 200372422 c--------------------------------
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4482  1 -     84244 c--------------------------------
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                               264772  1 +  21539334 c--------------------------------
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3586045                              19467 33 -     19819 cagcagtaaactcggtgcctgctgagggcccat
i Gorilla_beringei.k141_3586045                          C 0 I 57
s Gorilla_gorilla.LT578341.1                                257888 33 - 186649187 cagcagtggactcggtgcctgctgagggcccat
i Gorilla_gorilla.LT578341.1                             I 45 I 55
s Hoolock_leuconedys.ctg274                                    144359 32 -    630532 cagcagtagactcggtgcctgctgagg-cccat
i Hoolock_leuconedys.ctg274                                 C 0 I 3
s Hylobates_agilis.k141_1155965                               7459  2 +     12352 ca-------------------------------
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14644  2 +     55766 ca-------------------------------
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054174  2 + 191637585 ca-------------------------------
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803052  2 +  11177569 ca-------------------------------
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335707  1 -   1826925 c--------------------------------
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47099  1 -     61512 c--------------------------------
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374761  1 -  60120075 c--------------------------------
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27029  1 +     30207 c--------------------------------
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1867  1 -      5035 c--------------------------------
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26982  1 +     30527 c--------------------------------
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38158  1 -     50087 c--------------------------------
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47902  1 +     51645 c--------------------------------
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417105  1 - 187317192 c--------------------------------
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401335  1 +  25927173 c--------------------------------
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50507  1 -     62418 c--------------------------------
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3038  1 +     14901 c--------------------------------
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46979  1 +     59329 c--------------------------------
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272887  1 +    668171 c--------------------------------
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1519  1 -      5049 c--------------------------------
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4685  1 +     17132 c--------------------------------
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324175  1 +  24302211 c--------------------------------
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359006  1 -    752769 c--------------------------------
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24273  1 -     27822 c--------------------------------
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Nasalis_larvatus.k141_1350636                              31050  1 +     34575 c--------------------------------
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55290 33 -    132029 cagcagtagacttgctgcctgctgagggcccat
i Nomascus_annamensis.k141_1771965                       C 0 I 3
s Nomascus_concolor.k141_735679                              11385 33 -     16345 cagcagtagacttgctgcctgctgagggcccat
i Nomascus_concolor.k141_735679                          C 0 I 3
s Nomascus_gabriellae.k141_57920                             17270 33 +     22201 cagcagtagacttgctgcctgctgagggcccat
i Nomascus_gabriellae.k141_57920                         C 0 I 3
s Nomascus_siki_b.tarseq_93                            8415491 33 -  22158432 cagcagtagacttgctgcctgctgagggcccat
i Nomascus_siki_b.tarseq_93                          C 0 I 3
s Nomascus_siki_a.k141_941534                                  27668 33 -     54323 cagcagtagacttgctgcctgctgagggcccat
i Nomascus_siki_a.k141_941534                              C 0 I 3
s Pan_paniscus.AJFE02004362.1                                  685 33 +      1339 CAGCAGTAGACTCGGTGCCTGCTGAGGGCCCAT
i Pan_paniscus.AJFE02004362.1                            C 0 I 3
s Pan_troglodytes.KZ622849.1                                 36624 33 -    110857 CAGCAGTAGACTCGGTGCCTGCTGAGGGCCCAT
i Pan_troglodytes.KZ622849.1                             C 0 I 3
s Papio_anubis.CM001495.2                                   245184  1 - 183742232 c--------------------------------
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11469  1 +     21308 c--------------------------------
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294212  1 -  20919399 c--------------------------------
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24109  1 -     27687 c--------------------------------
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     788  1 +     10553 c--------------------------------
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   748  1 -     10386 c--------------------------------
i Papio_ursinus.k141_5784434                             C 0 C 0
s Piliocolobus_badius.k141_2704958                            4432  1 +     55023 c--------------------------------
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3954  1 -     89929 c--------------------------------
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4544  1 +     40849 c--------------------------------
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256274  1 +  14605196 c--------------------------------
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                   181044 33 - 189387572 cagcAGTAGACTCGGTGCCTCCTGAGGGCCCAT
i Pongo_abelii.CM009266.2                                C 0 I 3
s Pongo_pygmaeus.ctg66                                      195784 33 -   9816681 cagcagtagactcggtgcctcctgagggcccat
i Pongo_pygmaeus.ctg66                                   C 0 I 3
s Presbytis_comata.k141_1230337                              29632  1 +     69807 c--------------------------------
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46813  1 -     80239 c--------------------------------
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28999  1 +     91421 c--------------------------------
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155551  1 -   7812017 c--------------------------------
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9856  1 +     72585 c--------------------------------
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3463  1 +      7119 c--------------------------------
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124133  1 + 195417433 c--------------------------------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238305  1 -   7961872 c--------------------------------
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_583282                           438  1 +     11297 c--------------------------------
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30831  1 +     58920 c--------------------------------
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17329  1 -     45317 c--------------------------------
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24987  1 -     42441 c--------------------------------
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27663  1 -     29113 c--------------------------------
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30740  1 -     48123 c--------------------------------
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392756 33 +   1523678 cagcagtagacttgctgcctgctgagggcccat
i Symphalangus_syndactylus.tarseq_199                    C 0 I 3
s Theropithecus_gelada.CM009954.1                           354993  1 - 186847797 c--------------------------------
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22741  1 +     26378 c--------------------------------
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35540  1 -     78344 c--------------------------------
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22066  1 +     25722 c--------------------------------
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30496  1 -     62838 c--------------------------------
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30485  1 +     46913 c--------------------------------
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11224  1 -     28527 c--------------------------------
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32431  1 -     64340 c--------------------------------
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30469  1 -     63452 c--------------------------------
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11916  1 +     22490 c--------------------------------
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5282  1 -      6147 c--------------------------------
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12195  1 -     13050 c--------------------------------
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257359  1 -   6242583 c--------------------------------
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3455  1 +     19340 c--------------------------------
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
e Fukomys_damarensis.KN121974.1                            2923685  0 -   3816255 C
e Myocastor_coypus.MyoCoy_scaffold_15261                     64633  0 +     67721 C
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Capromys_pilorides.CapPil_scaffold_762519                   1045  0 -      1607 C
e Chinchilla_lanigera.JH722012.1                           1240276  0 -   2543920 C
e Nannospalax_galili.KL204047.1                             948156  0 +   3037898 C
e Saimiri_ustus.k141_360372                                  31783  0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16629  0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29228  0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32537  0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       32151  0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110584  0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            29641  0 +     75252 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              25818  0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     33601  0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_89005        3441  0 +      9367 C
e Octodon_degus.JH651603.1                                11056728  0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73320  0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1934066  0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10731  0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   7030  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18952100  0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                   100351  0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   5857  0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  20118  0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       64453  0 -     66877 C
e Cavia_porcellus.DS562891.1                               5001374  0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4997932  0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Callibella_humilis.k141_1233062                            11715  0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Tupaia_tana.TupTan_flattened_line_394                      10715  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1836684  0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380  0 -      1899 C
e Xerus_inauris.XerIna_scaffold_2302                        175725  0 -    224448 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Varecia_variegata.k141_289850                              25764  0 -    147434 C
e Varecia_rubra.k141_787544                                  26857  0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tarsius_wallacei.k141_226975                                9058  0 +     20590 C
e Tarsius_lariang.k141_1733899                                2260  0 +      9917 C
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1869969  0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524  0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Sapajus_macrocephalus.k141_796559                           9408  0 +     21866 C
e Sapajus_apella.ctg103                                     239818  0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Saguinus_oedipus.k141_1280589                               1984  0 -     22275 C
e Saguinus_mystax.k141_8077960                                5414  0 +      5979 C
e Saguinus_midas.LG03                                       393568  0 - 209938924 C
e Saguinus_labiatus.k141_2380921                              3811  0 -      4390 C
e Saguinus_inustus.k141_2469308                               5466  0 +      5932 C
e Saguinus_imperator.k141_1898058                             5549  0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             5455  0 +      6077 C
e Saguinus_bicolor.k141_2012906                                558  0 -      1130 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699  0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797  0 +     52041 C
e Propithecus_verreauxi.k141_1047036                          9906  0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       96267  0 -     98465 C
e Propithecus_perrieri.k141_1496898                          35988  0 +     46564 C
e Propithecus_edwardsi.k141_635656                            9674  0 -     30655 C
e Propithecus_diadema.k141_153680                             5937  0 -     11706 C
e Propithecus_coronatus.k141_209299                           5340  0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1567702  0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1984207  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Plecturocebus_moloch.k141_1031110                          45501  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          44034  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      16118  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          9181  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          44133  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          9182  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44484  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       44090  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4686  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9604  0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pithecia_vanzolinii.k141_1369553                           33187  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              558173  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33203  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33443  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               33167  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7419  0 -     25401 C
e Pithecia_albicans.k141_1239476                             66331  0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316  3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_5560                954  0 -    124358 C
e Mus_spretus.CM004101.1                                  39498971  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992  0 +  89631738 C
e Mus_musculus.chr8                                       41689686  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513  0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Mirza_zaza.k141_766280                                     54188  0 -     62432 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334  0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Microcebus_murinus.CM007674.1                           74986413  0 +  93316391 C
e Mico_schneideri.k141_1877700                                     20632  0 -     26561 C
e Mico_humeralifer.k141_1180625                              12313  0 -     12984 C
e Mico_argentatus.k141_582562                                11813  0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274  0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7502604  0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lepilemur_septentrionalis.k141_360456                      10581  0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                         10581  0 +     24756 C
e Lepilemur_dorsalis.k141_387009                             10571  0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                         10575  0 +     29618 C
e Leontopithecus_rosalia.k141_1583055                         5220  0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      418  0 +      8855 C
e Leontocebus_nigricollis.k141_3905062                        5266  0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           5443  0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        5689  0 -     13097 C
e Lemur_catta.scaffold_24                                 14761059  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Lagothrix_lagothricha.k141_246028                          44789  0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Indri_indri.k141_2415743                                    3950  0 +     11955 C
e Ictidomys_tridecemlineatus.JH393364.1                     388391  0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       8675  0 -    135385 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Hapalemur_occidentalis.k141_578367                         18405  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                         11403  0 -     42923 C
e Hapalemur_griseus.k141_763500                              62532  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             37661  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          16262  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_10447                    3927  0 -     78134 C
e Glis_glis.GliGli_scaffold_163929                            2858  0 -      6791 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Galeopterus_variegatus.GalVar_scaffold_51812                2717  0 -     28519 C
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              60575  0 -    111500 C
e Eulemur_rufus.k141_514691                                  44172  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            6452  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 49728  0 -     97555 C
e Eulemur_macaco.k141_1562045                                25533  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 54901  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             44577  0 +     68309 C
e Eulemur_coronatus.k141_384460                              88014  0 +    112731 C
e Eulemur_collaris.k141_601111                               44044  0 -     70999 C
e Eulemur_albifrons.k141_51491                               16334  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Daubentonia_madagascariensis.ctg71                        294121  0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    646925  0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Chiropotes_sagulatus.k141_1113111                           9514  0 +     34062 C
e Chiropotes_israelita.k141_313004                           43963  0 -    112038 C
e Chiropotes_albinasus.k141_2628359                            558  0 +      1057 C
e Cheracebus_torquatus.k141_890198                           20892  0 +     39636 C
e Cheracebus_regulus.k141_471822                             21103  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20848  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10435  0 -     32913 C
e Cheirogaleus_medius.k141_759766                             6718  0 -     15404 C
e Cheirogaleus_major.k141_666340                             32215  0 -     33796 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Cephalopachus_bancanus.k141_1689090                         4307  0 -      5494 C
e Cebus_unicolor.k141_1654760                                68594  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9498  0 -     34880 C
e Cebus_albifrons.Contig27                                  372610 1832 -  26074798 I
e Cebuella_pygmaea.k141_145798                               44688  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6630  0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Castor_canadensis.CasCan_scaffold_39952                    29219  0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           272347  0 +    496798 C
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Callithrix_kuhlii.k119_102356                               3231  0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455709  0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3320  0 -      8861 C
e Callimico_goeldii.k141_1609886                             11229  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         22062  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  22149  0 +     95584 C
e Cacajao_calvus.k141_89051                                  44623  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9329  0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Avahi_peyrierasi.k141_1823318                               7816  0 -     19611 C
e Avahi_laniger.k141_2756659                                  7808  0 +     11645 C
e Ateles_paniscus.k141_866194                                24522  0 -     33135 C
e Ateles_marginatus.k141_970259                              50464  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              35095  0 +     44353 C
e Ateles_chamek.k141_615173                                   7539  0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12404  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276238  0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      25497  0 -     32367 C
e Aotus_vociferans.k141_1514463                               3175  0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3616  0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673622  0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3340  0 -     15923 C
e Aotus_azarae.k141_887050                                    2715  0 +     17741 C
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Alouatta_seniculus.k141_928287                             34482  0 +     42133 C
e Alouatta_puruensis.k141_251022                             10348  0 +     30854 C
e Alouatta_palliata.k141_638677                              48175  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42526  0 +     45454 C
e Alouatta_macconnelli.k141_1277969                           1009  0 -      3959 C
e Alouatta_juara.k141_1687208                                43901  0 -     64179 C
e Alouatta_discolor.k141_2561099                             45451  0 +     55831 C
e Alouatta_caraya.k141_1109140                               46012  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73773  0 -     84148 C
e Allactaga_bullata.AllBul_scaffold_20030                    19945  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700  0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8621 46 +     36723 TCATGGATGGAGTCTTCTGTATGTCCTCATATggcggcagta----ga-a---------------t
s Allenopithecus_nigroviridis.k141_3755588                   49744 21 +     53615 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1771 21 +     13857 -----------------------------------agaagaa----ga-a-a-g-caaa-agct-c
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18326 21 -     21945 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20011 21 +     32033 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73773 25 -     84148 -----------------------------tacggcagaagaa----gg-a-a-g-caa--g-ct-g
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46012 25 -     78289 -----------------------------tacggcagaagaa----gg-a-a-g-caa--g-ct-g
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45451 25 +     55831 -----------------------------tacggcagaagaa----gg-a-a-g-caa--g-ct-g
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43901 25 -     64179 -----------------------------tacggcagaagaa----gg-a-a-g-caa--g-ct-g
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1009 25 -      3959 -----------------------------tacggcagaagaa----gg-a-a-g-caa--g-ct-g
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42526 25 +     45454 -----------------------------tacggcagaagaa----gg-a-a-g-caa--g-ct-g
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48175 25 +     70886 -----------------------------tacggcagaagaa----gg-a-a-g-caa--g-ct-g
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10348 25 +     30854 -----------------------------tacggcagaagaa----gg-a-a-g-caa--g-ct-g
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34482 25 +     42133 -----------------------------tacggcagaagaa----gg-a-a-g-caa--g-ct-g
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2715 25 +     17741 -----------------------------tatggcagaagaa----ag-a-a-g-caa--g-ct-g
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3340 25 -     15923 -----------------------------tatggcagaagaa----ag-a-a-g-caa--g-ct-g
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673622 25 +   5030052 -----------------------------TAtggcagaagaa----ag-a-a-g-caa--g-ct-g
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3616 25 -     16391 -----------------------------tatggcagaagaa----ag-a-a-g-caa--g-ct-g
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3175 25 -     17186 -----------------------------tatggcagaagaa----ag-a-a-g-caa--g-ct-g
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25497 24 -     32367 -----------------------------taaggtggaagaa----a--a-aa-----ttagct-c
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276238 25 +  21539123 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12404 25 +     48076 -----------------------------tatggcaggagag----ag-a-a-g-caa--g-ct-g
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7539 25 -     28759 -----------------------------taaggcaggagag----ag-a-a-g-caa--g-ct-g
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35095 25 +     44353 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50464 25 -     71267 -----------------------------taaggcaggagag----ag-a-a-g-caa--g-ct-g
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24522 25 -     33135 -----------------------------tatggcagaagag----ag-a-a-g-caa--g-ct-g
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7808 25 +     11645 -----------------------------catggcagaagaa----gg-a-aa--caa--g-ct-c
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7816 25 -     19611 -----------------------------catggcagaagaa----gg-a-aa--caa--g-ct-c
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9329 25 +     28062 -----------------------------tatggcagaagaa----gg-a-a-g-caa--g-ct-g
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44623 25 -     91139 -----------------------------tatggcagaagaa----gg-a-a-g-caa--g-ct-g
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22149 25 +     95584 -----------------------------tatggcagaagaa----gg-a-a-g-caa--g-ct-g
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22062 25 +    119600 -----------------------------tatggcagaagaa----gg-a-a-g-caa--g-ct-g
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11715 25 +     18648 -----------------------------tatggcagaagag----gg-a-a-g-ca--gg-ct-g
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11229 25 -     13885 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3320 25 -      8861 -----------------------------tatggcaggagag----gg-a-a-g-caa--g-ct-g
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455709 25 + 189096842 -----------------------------tatggcagaagag----gg-a-a-g-ca--gg-ct-g
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3231 25 +      8664 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1045 25 -      1607 -----------------------------tctggtggaataa----ga-a-aat-ga---g-ct-c
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272347 25 +    496798 -----------------------------catggcagaataa----ga-a-aa--caaat---t-c
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29219 25 -     39886 -----------------------------catgacagaagaa----ga-a-aac-ca--t--ct-c
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997932 25 +  23392119 -----------------------------tctggcagaaaaa----ga-a-a-----ANNN-NNNN
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001374 25 +  23407841 -----------------------------tctggcagaagaa----ga-a-aa--caa--g-gt-c
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64453 25 -     66877 -----------------------------tctggcagaagaa----ga-a-aa--caa--g-gt-c
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6630 25 -     12580 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44688 25 +     53515 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374442 25 -  26074798 -----------------------------catggcagaagaa----gg-a-a-t-caa--g-ct-g
i Cebus_albifrons.Contig27                               I 1832 C 0
s Cebus_olivaceus.k141_1404781                                9498 25 -     34880 -----------------------------catggcagaagaa----gg-a-a-t-caa--g-ct-g
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68594 25 -     89041 -----------------------------catggcagaagaa----gg-a-a-t-caa--g-ct-g
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4307 24 -      5494 -----------------------------catggcagaataa----ga-a-aa--caa-t---t-c
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                142826 21 -   4669795 -----------------------------------agaagaa----GG-A---A-GCGAAA-GCTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46565 21 +     47900 -----------------------------------agaagaa----gg-a-a-gcgaaa-g-ct-c
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1998 21 -     14410 -----------------------------------agaagaa----gg-a-a-gcgaaa-g-ct-c
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46382 21 -    148725 -----------------------------------agaagaa----gg-a-a-gcgaaa-g-ct-c
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28658 21 -     40656 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8617 21 +     20796 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13731 21 -     17524 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29463 21 -     34525 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13243 21 -     25376 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365830 21 -  39242232 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271557 21 +  21565898 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33922 21 -     45857 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28823 21 -     32606 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4986 21 +      8499 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27384 21 +     70610 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24345 21 +     36323 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32215 25 -     33796 -----------------------------catggcagaagaa----gg-a-aa--caa--g-ct-c
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6718 25 -     15404 -----------------------------catggcagaagaa----gg-a-aa--caa--g-ct-c
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10435 25 -     32913 -----------------------------tacggcaggagaa----gg-a-a-g-caa--g-ct-g
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20848 25 -     40346 -----------------------------tacggcagaagaa----gg-a-a-g-caa--g-ct-g
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21103 25 +    216457 -----------------------------tacggcagaagaa----gg-a-a-g-caa--g-ct-g
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20892 25 +     39636 -----------------------------tacggcagaagaa----gg-a-a-g-caa--g-ct-g
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240276 14 -   2543920 -----------------------------tcttgtggaagaa----g-------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 9
s Chiropotes_albinasus.k141_2628359                            558 16 +      1057 -----------------------------tatggcagaagag----gg-a----------------
i Chiropotes_albinasus.k141_2628359                      C 0 T 65
s Chiropotes_israelita.k141_313004                           43963 16 -    112038 -----------------------------tatggcagaagaa----gg-a----------------
i Chiropotes_israelita.k141_313004                       C 0 T 65
s Chiropotes_sagulatus.k141_1113111                           9514 16 +     34062 -----------------------------tatggcagaagaa----gg-a----------------
i Chiropotes_sagulatus.k141_1113111                      C 0 T 65
s Chlorocebus_aethiops.ctg25                                345246 21 +  18827391 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11785 21 -     44032 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306631 21 - 135778131 -----------------------------------agaagaa----gg-A---A-GCAAAA-GCTC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411044 21 -   2368649 -----------------------------------agaagaa----GG-A---A-GCAAAA-GCTC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380926 21 - 200372422 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4483 21 -     84244 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646925 25 -   1526836 -----------------------------tgaattagaaaaa----gt-aggag--a-gta----c
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20118 25 +     50838 -----------------------------tctagtggaagaa----ga-a-aa--caaa---ct-c
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5857 25 +     36344 -----------------------------tctggtagaagaa----ga-a-aa--caa--g-gt-c
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 2773
s Dasyprocta_punctata.DasPun_flattened_line_15900            29641 25 +     75252 -----------------------------tctcgtggaagaa----ga-a-aa--caa----gggc
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294121 25 +  12879189 -----------------------------catggcaaaagaa----gg-a-aa--caa--g-ct-c
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100351 22 -    115145 -----------------------------tcttgtgg---aa----ga-a-aa--caa-ga--t-c
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952100 34 -  37912305 -----------------------------catggaagaagaaaagaga-agaag-gaaata-cttc
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   7030 34 -     10735 -----------------------------catggaagaagaaaagaga-agaag-gaaata-cttc
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10731 25 +     14636 -----------------------------tctggtggaagaa----ga-a-aa--caa--g-gt-c
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Erythrocebus_patas.Contig38                               264773 21 +  21539334 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16334 25 -     24895 -----------------------------cctggcagaagaa----ga-a-aa--caa--g-ct-c
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               44044 25 -     70999 -----------------------------cctggcagaagaa----ga-a-aa--caa--g-ct-c
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              88014 25 +    112731 -----------------------------catggcagaagaa----ga-a-aa--caa--g-ct-c
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44577 25 +     68309 -----------------------------catggcagaagaa----ga-a-aa--caa--g-ct-c
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54901 25 -     65740 -----------------------------cctggcagaagaa----ga-a-aa--caa--g-ct-c
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25533 25 -     75513 -----------------------------catggcagaagaa----ga-a-aa--caa--g-ct-c
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49728 25 -     97555 -----------------------------cctggcagaagaa----ga-a-aa--caa--g-ct-c
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6452 25 +     30972 -----------------------------cttgtcagaagaa----ga-a-aa--caa--g-ct-c
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44172 25 -     52037 -----------------------------cctggcagaagaa----ga-a-aa--caa--g-ct-c
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60575 25 -    111500 -----------------------------cctggcagaagaa----ga-a-aa--caa--g-gt-c
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923685 25 -   3816255 -----------------------------tctggtggaagaa----ga-a-aa--caa--g-ct-g
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2717 25 -     28519 -----------------------------catggtggaagaa----gg-a-a-g-caa--g-ct-c
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2858 25 -      6791 -----------------------------cacagtgcaagaa----ga-a-aa--taa--g-ct-c
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_420802                                1045 54 -      1361 tcatagatggagttttctctatgtcctcatatggcagaagaa----gg-a-a-g-caa--g-ct-c
i Gorilla_beringei.k141_420802                           I 81 T 144
s Gorilla_gorilla.LT578336.1                                 74420 54 +  33314783 tcatagatggagttttctctatgtcctcatatggcagaagaa----ag-a-a-g-caa--g-ct-c
i Gorilla_gorilla.LT578336.1                             I 36 T 135
s Graphiurus_murinus.GraMur_scaffold_10447                    3927 25 -     78134 -----------------------------cgcagtggaagaa----ga-a-aa--taa--g-ct-c
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16262 25 -     40692 -----------------------------catgggagaagga----ga-a-aa--caa--g-ct-c
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37661 25 +     49394 -----------------------------catgggagaagga----ga-a-aa--caa--g-ct-c
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62532 25 -     66874 -----------------------------catggcagaagga----ga-a-aa--caa--g-ct-c
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11403 25 -     42923 -----------------------------catggcagaagga----ga-a-aa--caa--g-ct-c
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18405 25 -     53142 -----------------------------catggcagaagga----ga-a-aa--caa--g-ct-c
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934066 25 -  22651954 -----------------------------tctgttggaagaa----ga-a-a-c-caa--g-ct-c
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    144394 54 -    630532 tcatagatggagtcttctgtatgtcctcatatggcagaagaa----gg-a-a-g-caa--g-ct-c
i Hoolock_leuconedys.ctg274                                 I 3 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73320 24 +    143317 ------------------------------ctggcagaagaa----ga-a-aa--caa--g-gt-c
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7461 18 +     12352 ------------------------------------gaagaa----gg-a-a-g-caa--g-ct-c
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14646 18 +     55766 ------------------------------------gaagaa----gg-a-a-g-caa--g-ct-c
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054176 18 + 191637585 ------------------------------------gaagaa----gg-a-a-g-caa--g-ct-c
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803054 18 +  11177569 ------------------------------------gaagaa----gg-a-a-g-caa--g-ct-c
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8675 25 -    135385 -----------------------------tctggtggaggaa----ga-a-aa--caa--g-ct-c
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388391 26 +   7955117 -----------------------------catgatagaagaa----acac-aa--caa--g-ct-c
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3950 25 +     11955 -----------------------------catggcagaagaa----gg-a-aa--caa--g-ct-c
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44789 25 +    110728 -----------------------------tatggcagaagaa----gg-a-a-g-caagt---t-g
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14761059 25 +  30322482 -----------------------------catggcagaagga----ga-a-aa--caa--g-ct-c
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5689 25 -     13097 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5443 25 +      5940 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5266 25 -      5717 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      418 25 +      8855 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5220 25 -     13645 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10575 25 +     29618 -----------------------------catggcagaagaa----gg-a-aa--caa--g-ct-c
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10571 25 +     31569 -----------------------------catggcagaagaa----gg-a-aa--caa--g-ct-c
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10581 25 +     24756 -----------------------------cgtggcagaagaa----gg-a-aa--caa--g-ct-c
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10581 25 +     16388 -----------------------------catggcagaagaa----gg-a-aa--caa--g-ct-c
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               335708 21 -   1826925 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47100 21 -     61512 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374762 21 -  60120075 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27030 21 +     30207 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1868 21 -      5035 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26983 21 +     30527 -----------------------------------agaagga----gg-a-a-g-caaa-agct-c
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38159 21 -     50087 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47903 21 +     51645 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417106 21 - 187317192 -----------------------------------agaagaA----GG-A---A-GCAAAA-GCTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401336 21 +  25927173 -----------------------------------agaagaa----GG-A---A-GCAAAA-GCTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50508 21 -     62418 -----------------------------------agaagag----gg-a-a-g-caaa-agct-c
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3039 21 +     14901 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46980 21 +     59329 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272888 21 +    668171 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1520 21 -      5049 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4686 21 +     17132 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324176 21 +  24302211 -----------------------------------agaaaaa----gg-a-a-gcgaaa-g-ct-c
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359007 21 -    752769 -----------------------------------agaaaaa----gg-a-a-gcgaaa-g-ct-c
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502604 26 +  40650429 -----------------------------catggtagaagaa----acac-aa--taaa---ct-c
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_582562                                11813 25 +     17804 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12313 25 -     12984 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20632 25 -     26561 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986413 25 +  93316391 -----------------------------catggcagaagaa----gG-A------AACAA-GCTC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24274 21 -     27822 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54188 25 -     62432 -----------------------------catggcagaagaa----gg-a-aa--caa--g-ct-c
i Mirza_zaza.k141_766280                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560                954 22 -    124358 -----------------------------TACAGTG---GAA----CA-A------AATAA-GCTC
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64633 25 +     67721 -----------------------------tctggtagaataa----gg-a-aa--caa--g-ct-c
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              31051 21 +     34575 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55326 54 -    132029 tcatagatggagtcttccgtatgtcctcatatggcagaagaa----gg-a-a-g-caa--g-ct-c
i Nomascus_annamensis.k141_1771965                       I 3 C 0
s Nomascus_concolor.k141_735679                              11421 54 -     16345 tcatagatggagtcttccgtatgtcctcatatggcagaagaa----gg-a-a-g-caa--g-ct-c
i Nomascus_concolor.k141_735679                          I 3 C 0
s Nomascus_gabriellae.k141_57920                             17306 54 +     22201 tcatagatggagtcttccgtatgtcctcatatggcagaagaa----gg-a-a-g-caa--g-ct-c
i Nomascus_gabriellae.k141_57920                         I 3 C 0
s Nomascus_siki_b.tarseq_93                            8415527 54 -  22158432 tcatagatggagtcttccgtatgtcctcatatggcagaagaa----gg-a-a-g-caa--g-ct-c
i Nomascus_siki_b.tarseq_93                          I 3 C 0
s Nomascus_siki_a.k141_941534                                  27704 54 -     54323 tcatagatggagtcttccgtatgtcctcatatggcagaagaa----gg-a-a-g-caa--g-ct-c
i Nomascus_siki_a.k141_941534                              I 3 C 0
s Octodon_degus.JH651603.1                                11056728 25 -  11899542 -----------------------------tctagtggaagaa----ga-a-aa--caaat---t-c
i Octodon_degus.JH651603.1                               C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  721 54 +      1339 TCATAGATGGAGTTTTCTCtatgtcctcatatggcagaagaa----ag-a-a-g-caa----GCTC
i Pan_paniscus.AJFE02004362.1                            I 3 C 0
s Pan_troglodytes.KZ622849.1                                 36660 54 -    110857 TCATAGATGGAGTTTTCTCtatgtcctcatatggcagaagaa----ag-a-a-g-caa----GCTC
i Pan_troglodytes.KZ622849.1                             I 3 C 0
s Papio_anubis.CM001495.2                                   245185 21 - 183742232 -----------------------------------agaagaa----GG-A---A-GCAAAA-GCTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11470 21 +     21308 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294213 21 -  20919399 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24110 21 -     27687 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     789 21 +     10553 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   749 21 -     10386 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3441 29 +      9367 -----------------------------tatgggagaagaaaagaga-agaa------ta-gttc
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33601 25 -     56120 -----------------------------tctggtgaaagaa----ga-a-aa--caa--g-ct-g
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                            4433 21 +     55023 -----------------------------------agaagaa----gg-ag--g-caaa-agct-c
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3955 21 -     89929 -----------------------------------agaagaa----gg-ag--g-caaa-agct-c
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4545 21 +     40849 -----------------------------------agaagaa----gg-ag--g-caaa-agct-c
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256275 21 +  14605196 -----------------------------------agaagaA----GG-A---G-GCAAAA-GCTC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66331 25 +    207309 -----------------------------tgtggcagaagaa----gg-a-a-g-caa--g-ct-g
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7419 25 -     25401 -----------------------------tgtggcagaagaa----gg-a-a-g-caa--g-ct-g
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33167 25 +     58159 -----------------------------tgtggcagaagaa----gg-a-a-g-caa--g-ct-g
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33443 25 +     63561 -----------------------------tgtggcagaagaa----gg-a-a-g-caa--g-ct-g
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33203 25 +     51148 -----------------------------tgtggcagaagaa----gg-a-a-g-caa--g-ct-g
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558173 25 -   4542175 -----------------------------tgtggcagaagaa----gg-a-a-g-caa--g-ct-g
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33187 25 +     51125 -----------------------------tgtggcagaagag----gg-a-a-g-caa--g-ct-g
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9604 25 +     39866 -----------------------------tacggccgaagaa----gg-a-a-g-ca--gg-ct-g
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4686 25 -      9282 -----------------------------tacggccgaagaa----gg-a-a-g-ca--gg-ct-g
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44090 25 -     87950 -----------------------------tacggccgaagaa----gg-a-a-g-ca--gg-ct-g
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44484 25 -     88961 -----------------------------tacggccgaagaa----gg-a-a-g-ca--gg-ct-g
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9182 25 -     39403 -----------------------------tacggccgaagaa----gg-a-a-g-ca--gg-ct-g
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44133 25 +     87928 -----------------------------tacggccgaagaa----gg-a-a-g-ca--gg-ct-g
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9181 25 -     60166 -----------------------------tacggccgaagaa----gg-a-a-g-ca--gg-ct-g
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16118 25 -     67232 -----------------------------tacggccgaagaa----gg-a-a-g-ca--gg-ct-g
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44034 25 -     90634 -----------------------------tacggccgaagaa----gg-a-a-g-ca--gg-ct-g
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45501 25 +     89403 -----------------------------tacggccgaagaa----gg-a-a-g-ca--gg-ct-g
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181080 54 - 189387572 TCATAGATGGAGTTTTCTCtatgtcctcatatggcagaagaA----GG-A------AGTAA-GCTC
i Pongo_abelii.CM009266.2                                I 3 C 0
s Pongo_pygmaeus.ctg66                                      195820 54 -   9816681 tcatagatggagttttctctatgtcctcatatggcagaagaa----gg-a-a-g-taa--g-ct-c
i Pongo_pygmaeus.ctg66                                   I 3 C 0
s Presbytis_comata.k141_1230337                              29633 21 +     69807 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46814 21 -     80239 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984207 25 +   4620579 -----------------------------catggcagaagga----ga-a-a-----ACAA-GCTC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567702 25 -   2598838 -----------------------------CAtggcaaaagaa----gg-a-aa--caa--g-ct-c
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5340 25 -      7103 -----------------------------catggcaaaagaa----gg-a-aa--caa--g-ct-c
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5937 25 -     11706 -----------------------------catggcaaaagaa----gg-a-aa--caa--g-ct-c
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9674 25 -     30655 -----------------------------catggcaaaagaa----gg-a-aa--caa--g-ct-c
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35988 25 +     46564 -----------------------------catggcaaaagaa----gg-a-aa--caa--g-ct-c
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96267 25 -     98465 -----------------------------catggcaaaagaa----gg-a-aa--caa--g-ct-c
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9906 25 +     35169 -----------------------------catggcaaaagaa----gg-a-aa--caa--g-ct-c
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29000 21 +     91421 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155552 21 -   7812017 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9857 21 +     72585 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3464 21 +      7119 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124134 21 + 195417433 -----------------------------------agaagaA----GG-A---A-GCAAAA-GCTC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238306 21 -   7961872 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2012906                                558 25 -      1130 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5455 25 +      6077 -----------------------------tacggcagaagag----gg-a-a-g-caa--g-ct-g
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5549 25 +      5971 -----------------------------tacggcagaagag----gg-a-a-g-caa--g-ct-g
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5466 25 +      5932 -----------------------------tacggcagaagag----gg-a-a-g-caa--g-ct-g
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3811 25 -      4390 -----------------------------tacggcagaagag----gg-a-a-g-caa--g-ct-g
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393568 25 - 209938924 -----------------------------tatggcagaagag----gg-a-a-g-caa--g-ct-g
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5414 25 +      5979 -----------------------------tacggcagaagag----gg-a-a-g-caa--g-ct-g
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1984 25 -     22275 -----------------------------tacggcagaagag----gg-a-a-g-caa--g-ct-g
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110584 25 + 121099817 -----------------------------TATGGCAGAAGAA----GG-A------AGCAA-GCTG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32151 25 -     47369 -----------------------------tatggcagaagaa----gg-a-a-g-caa--g-ct-g
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32537 25 -     79414 -----------------------------tatggcagaagaa----gg-a-a-g-caa--g-ct-g
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29228 25 -     34454 -----------------------------tatggcagaagaa----gg-a-a-g-caa--g-ct-g
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16629 25 -     22428 -----------------------------tatggcagaagaa----gg-a-a-g-caa--g-ct-g
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31783 25 -     47109 -----------------------------tatggcagaagaa----gg-a-a-g-caa--g-ct-g
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239818 25 +   5703754 -----------------------------catggcagaagaa----gg-a-a-t-caa--g-ct-g
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9408 25 +     21866 -----------------------------catggcagaagaa----gg-a-a-t-caa--g-ct-g
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                           439 21 +     11297 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30832 21 +     58920 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17330 21 -     45317 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24988 21 -     42441 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27664 21 -     29113 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30741 21 -     48123 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869969 26 +   3870691 -----------------------------catagtagaaaaa----acac-aa--caa--g-ct-c
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392792 54 +   1523678 tcatagatggagtcttctgtatgtcctcatatggcagaagaa----gg-a-a-g-caa--g-ct-c
i Symphalangus_syndactylus.tarseq_199                    I 3 C 0
s Tarsius_lariang.k141_1733899                                2260 25 +      9917 -----------------------------catggcaggagaa----ga-a-aa--caagt---t-c
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9058 25 +     20590 -----------------------------cacggcagaagaa----ga-a-aa--caagt---t-c
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354994 21 - 186847797 -----------------------------------agaagaa----GG-A---A-GCAAAA-GCTC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25818 25 -     33621 -----------------------------attggtgaaagaa----ga-a-aa--caaa---ct-a
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22742 21 +     26378 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35541 21 -     78344 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22067 21 +     25722 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30497 21 -     62838 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30486 21 +     46913 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11225 21 -     28527 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32432 21 -     64340 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30470 21 -     63452 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11917 21 +     22490 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5283 21 -      6147 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12196 21 -     13050 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257360 21 -   6242583 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3456 21 +     19340 -----------------------------------agaagaa----gg-a-a-g-caaa-agct-c
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836684 25 -   4065304 -----------------------------cacggtggaagaa----ga-a-aag--aa--g-ct-t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10715 25 -     70247 -----------------------------cacggtggaagaa----ga-a-aag--aa--g-ct-t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  26857 25 -     30710 -----------------------------catggcagaaaga----ga-a-aa--caa--g-ct-c
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25764 25 -    147434 -----------------------------catggcagaaaga----ga-a-aa--caa--g-ct-c
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175725 26 -    224448 -----------------------------catggtagaagaa----aaaa-aa--caa-ga--t-a
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156  0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380  0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524  0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699  0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316  3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992  0 +  89631738 C
e Mus_musculus.chr8                                       41689686  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513  0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334  0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274  0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700  0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8667 2 +     36723 tg
s Allenopithecus_nigroviridis.k141_3755588                   49765 2 +     53615 cc
i Allenopithecus_nigroviridis.k141_3755588               C 0 T 80
s Allochrocebus_lhoesti.k141_3412094                          1792 2 +     13857 cc
i Allochrocebus_lhoesti.k141_3412094                     C 0 T 80
s Allochrocebus_preussi.k141_1993939                         18347 2 -     21945 cc
i Allochrocebus_preussi.k141_1993939                     C 0 T 80
s Allochrocebus_solatus.k141_3554717                         20032 2 +     32033 cc
i Allochrocebus_solatus.k141_3554717                     C 0 T 80
s Alouatta_belzebul.k141_1011583                             73798 2 -     84148 tc
i Alouatta_belzebul.k141_1011583                         C 0 T 76
s Alouatta_caraya.k141_1109140                               46037 2 -     78289 tc
i Alouatta_caraya.k141_1109140                           C 0 T 76
s Alouatta_discolor.k141_2561099                             45476 2 +     55831 tc
i Alouatta_discolor.k141_2561099                         C 0 T 76
s Alouatta_juara.k141_1687208                                43926 2 -     64179 tc
i Alouatta_juara.k141_1687208                            C 0 T 76
s Alouatta_macconnelli.k141_1277969                           1034 2 -      3959 tc
i Alouatta_macconnelli.k141_1277969                      C 0 T 76
s Alouatta_nigerrima.k141_376068                             42551 2 +     45454 tc
i Alouatta_nigerrima.k141_376068                         C 0 T 76
s Alouatta_palliata.k141_638677                              48200 2 +     70886 tc
i Alouatta_palliata.k141_638677                          C 0 T 76
s Alouatta_puruensis.k141_251022                             10373 2 +     30854 tc
i Alouatta_puruensis.k141_251022                         C 0 T 76
s Alouatta_seniculus.k141_928287                             34507 2 +     42133 tc
i Alouatta_seniculus.k141_928287                         C 0 T 76
s Aotus_azarae.k141_887050                                    2740 2 +     17741 tc
i Aotus_azarae.k141_887050                               C 0 T 52
s Aotus_griseimembra.k141_3192254                             3365 2 -     15923 tc
i Aotus_griseimembra.k141_3192254                        C 0 T 52
s Aotus_nancymaae.KZ198451.1                                673647 2 +   5030052 tc
i Aotus_nancymaae.KZ198451.1                             C 0 T 52
s Aotus_trivirgatus.k141_318729                               3641 2 -     16391 tc
i Aotus_trivirgatus.k141_318729                          C 0 T 52
s Aotus_vociferans.k141_1514463                               3200 2 -     17186 tc
i Aotus_vociferans.k141_1514463                          C 0 T 52
s Aplodontia_rufa.AprRuf_scaffold_46868                      25521 2 -     32367 tc
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 T 77
s Ateles_geoffroyi_b.tarseq_1536                               276263 2 +  21539123 tc
i Ateles_geoffroyi_b.tarseq_1536                            C 0 T 76
s Ateles_belzebuth.k141_1572163                              12429 2 +     48076 tc
i Ateles_belzebuth.k141_1572163                          C 0 T 76
s Ateles_chamek.k141_615173                                   7564 2 -     28759 tc
i Ateles_chamek.k141_615173                              C 0 T 76
s Ateles_geoffroyi_a.k141_1283730                              35120 2 +     44353 tc
i Ateles_geoffroyi_a.k141_1283730                          C 0 T 76
s Ateles_marginatus.k141_970259                              50489 2 -     71267 tc
i Ateles_marginatus.k141_970259                          C 0 T 76
s Ateles_paniscus.k141_866194                                24547 2 -     33135 tc
i Ateles_paniscus.k141_866194                            C 0 T 76
s Avahi_laniger.k141_2756659                                  7833 2 +     11645 tc
i Avahi_laniger.k141_2756659                             C 0 T 78
s Avahi_peyrierasi.k141_1823318                               7841 2 -     19611 tc
i Avahi_peyrierasi.k141_1823318                          C 0 T 78
s Cacajao_ayresi.k141_96119                                   9354 2 +     28062 tc
i Cacajao_ayresi.k141_96119                              C 0 T 76
s Cacajao_calvus.k141_89051                                  44648 2 -     91139 tc
i Cacajao_calvus.k141_89051                              C 0 T 76
s Cacajao_hosomi.k141_81245                                  22174 2 +     95584 tc
i Cacajao_hosomi.k141_81245                              C 0 T 76
s Cacajao_melanocephalus.k141_619699                         22087 2 +    119600 tc
i Cacajao_melanocephalus.k141_619699                     C 0 T 76
s Callibella_humilis.k141_1233062                            11740 2 +     18648 tc
i Callibella_humilis.k141_1233062                        C 0 T 76
s Callimico_goeldii.k141_1609886                             11254 2 -     13885 tc
i Callimico_goeldii.k141_1609886                         C 0 T 75
s Callithrix_geoffroyi.k119_459277                            3345 2 -      8861 tc
i Callithrix_geoffroyi.k119_459277                       C 0 T 76
s Callithrix_jacchus.pat_scaffold_3                      165455734 2 + 189096842 tc
i Callithrix_jacchus.pat_scaffold_3                      C 0 T 76
s Callithrix_kuhlii.k119_102356                               3256 2 +      8664 tc
i Callithrix_kuhlii.k119_102356                          C 0 T 76
s Capromys_pilorides.CapPil_scaffold_762519                   1070 2 -      1607 tc
i Capromys_pilorides.CapPil_scaffold_762519              C 0 T 75
s Carlito_syrichta.NW_007259797.1                           272372 2 +    496798 tc
i Carlito_syrichta.NW_007259797.1                        C 0 T 77
s Castor_canadensis.CasCan_scaffold_39952                    29244 2 -     39886 tc
i Castor_canadensis.CasCan_scaffold_39952                C 0 T 78
s Cavia_aperea.AVPZ01000300.1                              4997957 2 +  23392119 NN
i Cavia_aperea.AVPZ01000300.1                            C 0 T 69
s Cavia_porcellus.DS562891.1                               5001399 2 +  23407841 tc
i Cavia_porcellus.DS562891.1                             C 0 T 69
s Cavia_tschudii.CavTsc_scaffold_23560                       64478 2 -     66877 tc
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 T 69
s Cebuella_niveiventris.k141_592277                           6655 2 -     12580 tc
i Cebuella_niveiventris.k141_592277                      C 0 T 76
s Cebuella_pygmaea.k141_145798                               44713 2 +     53515 tc
i Cebuella_pygmaea.k141_145798                           C 0 T 76
s Cebus_albifrons.Contig27                                  374467 2 -  26074798 tc
i Cebus_albifrons.Contig27                               C 0 T 75
s Cebus_olivaceus.k141_1404781                                9523 2 -     34880 tc
i Cebus_olivaceus.k141_1404781                           C 0 T 76
s Cebus_unicolor.k141_1654760                                68619 2 -     89041 tc
i Cebus_unicolor.k141_1654760                            C 0 T 76
s Cephalopachus_bancanus.k141_1689090                         4331 2 -      5494 tt
i Cephalopachus_bancanus.k141_1689090                    C 0 T 76
s Cercocebus_atys.KQ010504.1                                142847 2 -   4669795 TC
i Cercocebus_atys.KQ010504.1                             C 0 T 80
s Cercocebus_chrysogaster.k141_1522556                       46586 2 +     47900 tc
i Cercocebus_chrysogaster.k141_1522556                   C 0 T 80
s Cercocebus_lunulatus.k141_2500334                           2019 2 -     14410 tc
i Cercocebus_lunulatus.k141_2500334                      C 0 T 80
s Cercocebus_torquatus.k141_2159127                          46403 2 -    148725 tc
i Cercocebus_torquatus.k141_2159127                      C 0 T 80
s Cercopithecus_ascanius.k141_3120866                        28679 2 -     40656 tc
i Cercopithecus_ascanius.k141_3120866                    C 0 T 80
s Cercopithecus_cephus.k141_4183004                           8638 2 +     20796 tc
i Cercopithecus_cephus.k141_4183004                      C 0 T 80
s Cercopithecus_diana.k141_132293                            13752 2 -     17524 tc
i Cercopithecus_diana.k141_132293                        C 0 T 80
s Cercopithecus_hamlyni.k141_566925                          29484 2 -     34525 tc
i Cercopithecus_hamlyni.k141_566925                      C 0 T 80
s Cercopithecus_lowei.k141_2101310                           13264 2 -     25376 tc
i Cercopithecus_lowei.k141_2101310                       C 0 T 80
s Cercopithecus_albogularis.ctg5                                  365851 2 -  39242232 tc
i Cercopithecus_albogularis.ctg5                               C 0 T 80
s Cercopithecus_mona.ctg39                                  271578 2 +  21565898 tc
i Cercopithecus_mona.ctg39                               C 0 T 80
s Cercopithecus_neglectus.k141_858615                        33943 2 -     45857 tc
i Cercopithecus_neglectus.k141_858615                    C 0 T 80
s Cercopithecus_nictitans.k141_2995370                       28844 2 -     32606 tc
i Cercopithecus_nictitans.k141_2995370                   C 0 T 80
s Cercopithecus_petaurista.k141_42573                         5007 2 +      8499 tc
i Cercopithecus_petaurista.k141_42573                    C 0 T 80
s Cercopithecus_pogonias.k141_6079                           27405 2 +     70610 tc
i Cercopithecus_pogonias.k141_6079                       C 0 T 80
s Cercopithecus_roloway.k141_3012935                         24366 2 +     36323 tc
i Cercopithecus_roloway.k141_3012935                     C 0 T 80
s Cheirogaleus_major.k141_666340                             32240 2 -     33796 tc
i Cheirogaleus_major.k141_666340                         C 0 T 78
s Cheirogaleus_medius.k141_759766                             6743 2 -     15404 tc
i Cheirogaleus_medius.k141_759766                        C 0 T 78
s Cheracebus_lucifer.k141_2312002                            10460 2 -     32913 tc
i Cheracebus_lucifer.k141_2312002                        C 0 T 75
s Cheracebus_lugens.k141_1179667                             20873 2 -     40346 tc
i Cheracebus_lugens.k141_1179667                         C 0 T 75
s Cheracebus_regulus.k141_471822                             21128 2 +    216457 tc
i Cheracebus_regulus.k141_471822                         C 0 T 75
s Cheracebus_torquatus.k141_890198                           20917 2 +     39636 tc
i Cheracebus_torquatus.k141_890198                       C 0 T 75
s Chinchilla_lanigera.JH722012.1                           1240299 2 -   2543920 tc
i Chinchilla_lanigera.JH722012.1                         I 9 T 68
s Chiropotes_albinasus.k141_1091259                          32883 2 -     52013 at
i Chiropotes_albinasus.k141_1091259                      n 65 T 2
s Chiropotes_israelita.k141_939154                           68961 2 +    248106 AT
i Chiropotes_israelita.k141_939154                       n 65 T 2
s Chiropotes_sagulatus.k141_1049826                          20758 2 -     40411 AT
i Chiropotes_sagulatus.k141_1049826                      n 65 T 2
s Chlorocebus_aethiops.ctg25                                345267 2 +  18827391 cc
i Chlorocebus_aethiops.ctg25                             C 0 T 80
s Chlorocebus_pygerythrus.k141_3063162                       11806 2 -     44032 cc
i Chlorocebus_pygerythrus.k141_3063162                   C 0 T 80
s Chlorocebus_sabaeus.CM001947.1                            306652 2 - 135778131 CC
i Chlorocebus_sabaeus.CM001947.1                         C 0 T 79
s Colobus_angolensis.KN981557.1                             411065 2 -   2368649 TC
i Colobus_angolensis.KN981557.1                          C 0 T 80
s Colobus_guereza.LG01                                      380947 2 - 200372422 tc
i Colobus_guereza.LG01                                   C 0 T 80
s Colobus_polykomos.k141_906115                               4504 2 -     84244 tc
i Colobus_polykomos.k141_906115                          C 0 T 80
s Ctenodactylus_gundi.CteGun_scaffold_65                    646950 2 -   1526836 tt
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 T 77
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20143 2 +     50838 tc
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 T 75
s Cuniculus_paca.CunPac_flattened_line_7025                   8655 2 +     36344 tc
i Cuniculus_paca.CunPac_flattened_line_7025              I 2773 T 2851
s Dasyprocta_punctata.DasPun_flattened_line_15900            29666 2 +     75252 tc
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 T 78
s Daubentonia_madagascariensis.ctg71                        294146 2 +  12879189 tc
i Daubentonia_madagascariensis.ctg71                     C 0 T 78
s Dinomys_branickii.DinBra_scaffold_10381                   100373 2 -    115145 tc
i Dinomys_branickii.DinBra_scaffold_10381                C 0 T 75
s Dipodomys_ordii.KN672350.1                              18952134 2 -  37912305 tc
i Dipodomys_ordii.KN672350.1                             C 0 T 84
s Dipodomys_stephensi.DipSte_scaffold_89095                   7064 2 -     10735 tc
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 T 84
s Dolichotis_patagonum.DolPat_scaffold_80628                 10756 2 +     14636 tc
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 T 69
s Erythrocebus_patas.Contig38                               264794 2 +  21539334 cc
i Erythrocebus_patas.Contig38                            C 0 T 78
s Eulemur_albifrons.k141_51491                               16359 2 -     24895 tc
i Eulemur_albifrons.k141_51491                           C 0 T 75
s Eulemur_collaris.k141_601111                               44069 2 -     70999 tc
i Eulemur_collaris.k141_601111                           C 0 T 75
s Eulemur_coronatus.k141_384460                              88039 2 +    112731 tc
i Eulemur_coronatus.k141_384460                          C 0 T 75
s Eulemur_flavifrons.k141_433119                             44602 2 +     68309 tc
i Eulemur_flavifrons.k141_433119                         C 0 T 75
s Eulemur_fulvus.k141_636316                                 54926 2 -     65740 tc
i Eulemur_fulvus.k141_636316                             C 0 T 75
s Eulemur_macaco.k141_1562045                                25558 2 -     75513 tc
i Eulemur_macaco.k141_1562045                            C 0 T 74
s Eulemur_mongoz.k141_232305                                 49753 2 -     97555 tc
i Eulemur_mongoz.k141_232305                             C 0 T 75
s Eulemur_rubriventer.k141_1423786                            6477 2 +     30972 tc
i Eulemur_rubriventer.k141_1423786                       C 0 T 75
s Eulemur_rufus.k141_514691                                  44197 2 -     52037 tc
i Eulemur_rufus.k141_514691                              C 0 T 75
s Eulemur_sanfordi.k141_1122526                              60600 2 -    111500 tc
i Eulemur_sanfordi.k141_1122526                          C 0 T 75
s Fukomys_damarensis.KN121974.1                            2923710 2 -   3816255 tc
i Fukomys_damarensis.KN121974.1                          C 0 T 78
s Galeopterus_variegatus.GalVar_scaffold_51812                2742 2 -     28519 cc
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 T 78
s Glis_glis.GliGli_scaffold_163929                            2883 2 -      6791 tc
i Glis_glis.GliGli_scaffold_163929                       C 0 T 78
s Gorilla_beringei.k141_3586045                              19557 2 -     19819 tc
i Gorilla_beringei.k141_3586045                          I 57 T 148
s Gorilla_gorilla.LT578341.1                                257976 2 - 186649187 tc
i Gorilla_gorilla.LT578341.1                             I 55 T 146
s Graphiurus_murinus.GraMur_scaffold_10447                    3952 2 -     78134 cc
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 T 78
s Hapalemur_alaotrensis.k141_330369                          16287 2 -     40692 tc
i Hapalemur_alaotrensis.k141_330369                      C 0 T 78
s Hapalemur_gilberti.k141_646465                             37686 2 +     49394 tc
i Hapalemur_gilberti.k141_646465                         C 0 T 78
s Hapalemur_griseus.k141_763500                              62557 2 -     66874 tc
i Hapalemur_griseus.k141_763500                          C 0 T 78
s Hapalemur_meridionalis.k141_258450                         11428 2 -     42923 tc
i Hapalemur_meridionalis.k141_258450                     C 0 T 78
s Hapalemur_occidentalis.k141_578367                         18430 2 -     53142 tc
i Hapalemur_occidentalis.k141_578367                     C 0 T 78
s Heterocephalus_glaber.JH602082.1                         1934091 2 -  22651954 tc
i Heterocephalus_glaber.JH602082.1                       C 0 T 72
s Hoolock_leuconedys.ctg274                                    144448 2 -    630532 tc
i Hoolock_leuconedys.ctg274                                 C 0 T 147
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73344 2 +    143317 tc
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 T 66
s Hylobates_agilis.k141_1155965                               7479 2 +     12352 tc
i Hylobates_agilis.k141_1155965                          C 0 T 147
s Hylobates_klossii.k141_738755                              14664 2 +     55766 tc
i Hylobates_klossii.k141_738755                          C 0 T 148
s Hylobates_pileatus_b.LG02                                       2054194 2 + 191637585 tc
i Hylobates_pileatus_b.LG02                                     C 0 T 78
s Hylobates_pileatus_a.tarseq_633                            7803072 2 +  11177569 tc
i Hylobates_pileatus_a.tarseq_633                          C 0 T 78
s Hystrix_cristata.HysCri_scaffold_5660                       8700 2 -    135385 tc
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 T 76
s Ictidomys_tridecemlineatus.JH393364.1                     388417 2 +   7955117 ca
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 T 79
s Indri_indri.k141_2415743                                    3975 2 +     11955 tc
i Indri_indri.k141_2415743                               C 0 T 78
s Lagothrix_lagothricha.k141_246028                          44814 2 +    110728 tc
i Lagothrix_lagothricha.k141_246028                      C 0 T 76
s Lemur_catta.scaffold_24                                 14761084 2 +  30322482 tc
i Lemur_catta.scaffold_24                                C 0 T 78
s Leontocebus_fuscicollis.k141_2994775                        5714 2 -     13097 tc
i Leontocebus_fuscicollis.k141_2994775                   C 0 T 76
s Leontocebus_illigeri.k141_2951200                           5468 2 +      5940 tc
i Leontocebus_illigeri.k141_2951200                      C 0 T 76
s Leontocebus_nigricollis.k141_3905062                        5291 2 -      5717 tc
i Leontocebus_nigricollis.k141_3905062                   C 0 T 76
s Leontopithecus_chrysomelas.k141_3286424                      443 2 +      8855 tc
i Leontopithecus_chrysomelas.k141_3286424                C 0 T 76
s Leontopithecus_rosalia.k141_1583055                         5245 2 -     13645 tc
i Leontopithecus_rosalia.k141_1583055                    C 0 T 76
s Lepilemur_ankaranensis.k141_567626                         10600 2 +     29618 tc
i Lepilemur_ankaranensis.k141_567626                     C 0 T 78
s Lepilemur_dorsalis.k141_387009                             10596 2 +     31569 tc
i Lepilemur_dorsalis.k141_387009                         C 0 T 78
s Lepilemur_ruficaudatus.k141_330196                         10606 2 +     24756 tc
i Lepilemur_ruficaudatus.k141_330196                     C 0 T 78
s Lepilemur_septentrionalis.k141_360456                      10606 2 +     16388 tc
i Lepilemur_septentrionalis.k141_360456                  C 0 T 78
s Lophocebus_aterrimus.ctg367                               335729 2 -   1826925 tc
i Lophocebus_aterrimus.ctg367                            C 0 T 80
s Macaca_arctoides.k141_1757516                              47121 2 -     61512 tc
i Macaca_arctoides.k141_1757516                          C 0 T 80
s Macaca_assamensis.Contig5                                 374783 2 -  60120075 tc
i Macaca_assamensis.Contig5                              C 0 T 80
s Macaca_cyclopis.k119_263443                                27051 2 +     30207 tc
i Macaca_cyclopis.k119_263443                            C 0 T 80
s Macaca_fascicularis.k141_1617581                            1889 2 -      5035 tc
i Macaca_fascicularis.k141_1617581                       C 0 T 80
s Macaca_fuscata.k119_546792                                 27004 2 +     30527 tc
i Macaca_fuscata.k119_546792                             C 0 T 80
s Macaca_leonina.k141_321385                                 38180 2 -     50087 tc
i Macaca_leonina.k141_321385                             C 0 T 80
s Macaca_maura.k141_1103459                                  47924 2 +     51645 tc
i Macaca_maura.k141_1103459                              C 0 T 80
s Macaca_mulatta.NC_041758.1                                417127 2 - 187317192 TC
i Macaca_mulatta.NC_041758.1                             C 0 T 80
s Macaca_nemestrina.KQ007038.1                              401357 2 +  25927173 TC
i Macaca_nemestrina.KQ007038.1                           C 0 T 80
s Macaca_nigra.k141_2818840                                  50529 2 -     62418 tc
i Macaca_nigra.k141_2818840                              C 0 T 80
s Macaca_radiata.k141_2139468                                 3060 2 +     14901 tc
i Macaca_radiata.k141_2139468                            C 0 T 80
s Macaca_siberu.k141_2185972                                 47001 2 +     59329 tc
i Macaca_siberu.k141_2185972                             C 0 T 80
s Macaca_silenus.Contig273                                  272909 2 +    668171 tc
i Macaca_silenus.Contig273                               C 0 T 80
s Macaca_thibetana.k99_45532                                  1541 2 -      5049 tc
i Macaca_thibetana.k99_45532                             C 0 T 80
s Macaca_tonkeana.k141_339739                                 4707 2 +     17132 tc
i Macaca_tonkeana.k141_339739                            C 0 T 80
s Mandrillus_leucophaeus.scaffold280                        324197 2 +  24302211 tc
i Mandrillus_leucophaeus.scaffold280                     C 0 T 80
s Mandrillus_sphinx.Contig270                               359028 2 -    752769 tc
i Mandrillus_sphinx.Contig270                            C 0 T 80
s Marmota_marmota.CZRN01000018.1                           7502630 2 +  40650429 tc
i Marmota_marmota.CZRN01000018.1                         C 0 T 79
s Mico_argentatus.k141_582562                                11838 2 +     17804 tc
i Mico_argentatus.k141_582562                            C 0 T 76
s Mico_humeralifer.k141_1180625                              12338 2 -     12984 tc
i Mico_humeralifer.k141_1180625                          C 0 T 76
s Mico_schneideri.k141_1877700                                     20657 2 -     26561 tc
i Mico_schneideri.k141_1877700                                 C 0 T 76
s Microcebus_murinus.CM007674.1                           74986438 2 +  93316391 TC
i Microcebus_murinus.CM007674.1                          C 0 T 78
s Miopithecus_ogouensis.k141_1534655                         24295 2 -     27822 tc
i Miopithecus_ogouensis.k141_1534655                     C 0 T 80
s Mirza_zaza.k141_766280                                     54213 2 -     62432 tc
i Mirza_zaza.k141_766280                                 C 0 T 78
s Muscardinus_avellanarius.MusAve_scaffold_5560                976 2 -    124358 CC
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 T 75
s Myocastor_coypus.MyoCoy_scaffold_15261                     64658 2 +     67721 tc
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 T 75
s Nasalis_larvatus.k141_1350636                              31072 2 +     34575 tc
i Nasalis_larvatus.k141_1350636                          C 0 T 80
s Nomascus_annamensis.k141_1771965                           55380 2 -    132029 tc
i Nomascus_annamensis.k141_1771965                       C 0 T 148
s Nomascus_concolor.k141_735679                              11475 2 -     16345 tc
i Nomascus_concolor.k141_735679                          C 0 T 148
s Nomascus_gabriellae.k141_57920                             17360 2 +     22201 tc
i Nomascus_gabriellae.k141_57920                         C 0 T 148
s Nomascus_siki_b.tarseq_93                            8415581 2 -  22158432 tc
i Nomascus_siki_b.tarseq_93                          C 0 T 148
s Nomascus_siki_a.k141_941534                                  27758 2 -     54323 tc
i Nomascus_siki_a.k141_941534                              C 0 T 148
s Octodon_degus.JH651603.1                                11056753 2 -  11899542 cc
i Octodon_degus.JH651603.1                               C 0 T 75
s Pan_paniscus.AJFE02004362.1                                  775 2 +      1339 TC
i Pan_paniscus.AJFE02004362.1                            C 0 T 148
s Pan_troglodytes.KZ622849.1                                 36714 2 -    110857 TC
i Pan_troglodytes.KZ622849.1                             C 0 T 148
s Papio_anubis.CM001495.2                                   245206 2 - 183742232 TC
i Papio_anubis.CM001495.2                                C 0 T 80
s Papio_cynocephalus.k141_1507553                            11491 2 +     21308 tc
i Papio_cynocephalus.k141_1507553                        C 0 T 80
s Papio_hamadryas.Contig39                                  294234 2 -  20919399 tc
i Papio_hamadryas.Contig39                               C 0 T 80
s Papio_kindae.k141_2214839                                  24131 2 -     27687 tc
i Papio_kindae.k141_2214839                              C 0 T 80
s Papio_papio.k141_3538738                                     810 2 +     10553 tc
i Papio_papio.k141_3538738                               C 0 T 80
s Papio_ursinus.k141_5784434                                   770 2 -     10386 tc
i Papio_ursinus.k141_5784434                             C 0 T 80
s Perognathus_longimembris.PerPac_flattened_line_89005        3470 2 +      9367 cc
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 T 79
s Petromus_typicus.PetTyp_scaffold_17301                     33626 2 -     56120 tc
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 T 52
s Piliocolobus_badius.k141_2704958                            4454 2 +     55023 cc
i Piliocolobus_badius.k141_2704958                       C 0 T 80
s Piliocolobus_gordonorum.k141_381342                         3976 2 -     89929 tc
i Piliocolobus_gordonorum.k141_381342                    C 0 T 80
s Piliocolobus_kirkii.k141_1310104                            4566 2 +     40849 tc
i Piliocolobus_kirkii.k141_1310104                       C 0 T 80
s Piliocolobus_tephrosceles.PDMG02000141.1                  256296 2 +  14605196 TC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 T 80
s Pithecia_albicans.k141_1239476                             66356 2 +    207309 tc
i Pithecia_albicans.k141_1239476                         C 0 T 76
s Pithecia_chrysocephala.k141_785207                          7444 2 -     25401 tc
i Pithecia_chrysocephala.k141_785207                     C 0 T 76
s Pithecia_hirsuta.k141_640380                               33192 2 +     58159 tc
i Pithecia_hirsuta.k141_640380                           C 0 T 76
s Pithecia_mittermeieri.k141_1280039                         33468 2 +     63561 tc
i Pithecia_mittermeieri.k141_1280039                     C 0 T 76
s Pithecia_pissinattii.k141_878371                           33228 2 +     51148 tc
i Pithecia_pissinattii.k141_878371                       C 0 T 76
s Pithecia_pithecia.tarseq_165                              558198 2 -   4542175 tc
i Pithecia_pithecia.tarseq_165                           C 0 T 76
s Pithecia_vanzolinii.k141_1369553                           33212 2 +     51125 tc
i Pithecia_vanzolinii.k141_1369553                       C 0 T 76
s Plecturocebus_bernhardi.k141_2549090                        9629 2 +     39866 tc
i Plecturocebus_bernhardi.k141_2549090                   C 0 T 75
s Plecturocebus_brunneus.k141_862875                          4711 2 -      9282 tc
i Plecturocebus_brunneus.k141_862875                     C 0 T 75
s Plecturocebus_caligatus.k141_1382851                       44115 2 -     87950 tc
i Plecturocebus_caligatus.k141_1382851                   C 0 T 75
s Plecturocebus_cinerascens.k141_1164729                     44509 2 -     88961 tc
i Plecturocebus_cinerascens.k141_1164729                 C 0 T 75
s Plecturocebus_cupreus.k141_2351393                          9207 2 -     39403 tc
i Plecturocebus_cupreus.k141_2351393                     C 0 T 75
s Plecturocebus_dubius.k141_1058799                          44158 2 +     87928 tc
i Plecturocebus_dubius.k141_1058799                      C 0 T 75
s Plecturocebus_grovesi.k141_2013005                          9206 2 -     60166 tc
i Plecturocebus_grovesi.k141_2013005                     C 0 T 75
s Plecturocebus_hoffmannsi.k141_3303950                      16143 2 -     67232 tc
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 T 75
s Plecturocebus_miltoni.k141_349282                          44059 2 -     90634 tc
i Plecturocebus_miltoni.k141_349282                      C 0 T 75
s Plecturocebus_moloch.k141_1031110                          45526 2 +     89403 tc
i Plecturocebus_moloch.k141_1031110                      C 0 T 75
s Pongo_abelii.CM009266.2                                   181134 2 - 189387572 TC
i Pongo_abelii.CM009266.2                                C 0 T 148
s Pongo_pygmaeus.ctg66                                      195874 2 -   9816681 tc
i Pongo_pygmaeus.ctg66                                   C 0 T 148
s Presbytis_comata.k141_1230337                              29654 2 +     69807 tc
i Presbytis_comata.k141_1230337                          C 0 T 80
s Presbytis_mitrata.k141_584736                              46835 2 -     80239 tc
i Presbytis_mitrata.k141_584736                          C 0 T 80
s Prolemur_simus.MPIZ01000396.1                            1984232 2 +   4620579 TC
i Prolemur_simus.MPIZ01000396.1                          C 0 T 78
s Propithecus_coquerelli.NW_012148875.1                    1567727 2 -   2598838 cc
i Propithecus_coquerelli.NW_012148875.1                  C 0 T 78
s Propithecus_coronatus.k141_209299                           5365 2 -      7103 cc
i Propithecus_coronatus.k141_209299                      C 0 T 78
s Propithecus_diadema.k141_153680                             5962 2 -     11706 cc
i Propithecus_diadema.k141_153680                        C 0 T 78
s Propithecus_edwardsi.k141_635656                            9699 2 -     30655 cc
i Propithecus_edwardsi.k141_635656                       C 0 T 78
s Propithecus_perrieri.k141_1496898                          36013 2 +     46564 cc
i Propithecus_perrieri.k141_1496898                      C 0 T 78
s Propithecus_tattersalli.k141_1127767                       96292 2 -     98465 cc
i Propithecus_tattersalli.k141_1127767                   C 0 T 78
s Propithecus_verreauxi.k141_1047036                          9931 2 +     35169 cc
i Propithecus_verreauxi.k141_1047036                     C 0 T 78
s Pygathrix_cinerea.k141_1153803                             29021 2 +     91421 tc
i Pygathrix_cinerea.k141_1153803                         C 0 T 80
s Pygathrix_nigripes_b.ctg100                                  155573 2 -   7812017 tc
i Pygathrix_nigripes_b.ctg100                               C 0 T 80
s Pygathrix_nigripes_a.k141_215492                              9878 2 +     72585 tc
i Pygathrix_nigripes_a.k141_215492                         C 0 T 80
s Rhinopithecus_bieti.k119_778604                             3485 2 +      7119 tc
i Rhinopithecus_bieti.k119_778604                        C 0 T 80
s Rhinopithecus_roxellana.NC_044550.1                    104124155 2 + 195417433 TC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 T 80
s Rhinopithecus_strykeri.ctg102                             238327 2 -   7961872 tc
i Rhinopithecus_strykeri.ctg102                          C 0 T 80
s Saguinus_bicolor.k141_2012906                                583 2 -      1130 tc
i Saguinus_bicolor.k141_2012906                          C 0 T 76
s Saguinus_geoffroyi.k141_3779887                             5480 2 +      6077 tc
i Saguinus_geoffroyi.k141_3779887                        C 0 T 76
s Saguinus_imperator.k141_1898058                             5574 2 +      5971 tc
i Saguinus_imperator.k141_1898058                        C 0 T 76
s Saguinus_inustus.k141_2469308                               5491 2 +      5932 tc
i Saguinus_inustus.k141_2469308                          C 0 T 76
s Saguinus_labiatus.k141_2380921                              3836 2 -      4390 tc
i Saguinus_labiatus.k141_2380921                         C 0 T 76
s Saguinus_midas.LG03                                       393593 2 - 209938924 tc
i Saguinus_midas.LG03                                    C 0 T 76
s Saguinus_mystax.k141_8077960                                5439 2 +      5979 tc
i Saguinus_mystax.k141_8077960                           C 0 T 76
s Saguinus_oedipus.k141_1280589                               2009 2 -     22275 tc
i Saguinus_oedipus.k141_1280589                          C 0 T 76
s Saimiri_boliviensis.NW_024100920.1                       1110609 2 + 121099817 TC
i Saimiri_boliviensis.NW_024100920.1                     C 0 T 76
s Saimiri_cassiquiarensis.k141_1467335                       32176 2 -     47369 tc
i Saimiri_cassiquiarensis.k141_1467335                   C 0 T 76
s Saimiri_macrodon.k141_1173117                              32562 2 -     79414 tc
i Saimiri_macrodon.k141_1173117                          C 0 T 76
s Saimiri_oerstedii.k141_245838                              29253 2 -     34454 tc
i Saimiri_oerstedii.k141_245838                          C 0 T 76
s Saimiri_sciureus.k141_1467173                              16654 2 -     22428 tc
i Saimiri_sciureus.k141_1467173                          C 0 T 76
s Saimiri_ustus.k141_360372                                  31808 2 -     47109 tc
i Saimiri_ustus.k141_360372                              C 0 T 76
s Sapajus_apella.ctg103                                     239843 2 +   5703754 tc
i Sapajus_apella.ctg103                                  C 0 T 76
s Sapajus_macrocephalus.k141_796559                           9433 2 +     21866 tc
i Sapajus_macrocephalus.k141_796559                      C 0 T 76
s Semnopithecus_entellus.k141_583282                           460 2 +     11297 tc
i Semnopithecus_entellus.k141_583282                     C 0 T 80
s Semnopithecus_hypoleucos.k141_1910531                      30853 2 +     58920 tc
i Semnopithecus_hypoleucos.k141_1910531                  C 0 T 80
s Semnopithecus_johnii.k141_843753                           17351 2 -     45317 tc
i Semnopithecus_johnii.k141_843753                       C 0 T 80
s Semnopithecus_priam.k141_714795                            25009 2 -     42441 tc
i Semnopithecus_priam.k141_714795                        C 0 T 80
s Semnopithecus_schistaceus.k141_1432920                     27685 2 -     29113 tc
i Semnopithecus_schistaceus.k141_1432920                 C 0 T 80
s Semnopithecus_vetulus.k141_244474                          30762 2 -     48123 tc
i Semnopithecus_vetulus.k141_244474                      C 0 T 80
s Spermophilus_dauricus.KZ294078.1                         1869995 2 +   3870691 ct
i Spermophilus_dauricus.KZ294078.1                       C 0 T 79
s Symphalangus_syndactylus.tarseq_199                       392846 2 +   1523678 tc
i Symphalangus_syndactylus.tarseq_199                    C 0 T 148
s Tarsius_lariang.k141_1733899                                2285 2 +      9917 tc
i Tarsius_lariang.k141_1733899                           C 0 T 77
s Tarsius_wallacei.k141_226975                                9083 2 +     20590 tc
i Tarsius_wallacei.k141_226975                           C 0 T 77
s Theropithecus_gelada.CM009954.1                           355015 2 - 186847797 TC
i Theropithecus_gelada.CM009954.1                        C 0 T 80
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25843 2 -     33621 tc
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 T 78
s Trachypithecus_auratus.k141_1189070                        22763 2 +     26378 tc
i Trachypithecus_auratus.k141_1189070                    C 0 T 80
s Trachypithecus_crepusculus.k141_539312                     35562 2 -     78344 tc
i Trachypithecus_crepusculus.k141_539312                 C 0 T 80
s Trachypithecus_cristatus.k141_180416                       22088 2 +     25722 tc
i Trachypithecus_cristatus.k141_180416                   C 0 T 80
s Trachypithecus_francoisi.k141_1453105                      30518 2 -     62838 tc
i Trachypithecus_francoisi.k141_1453105                  C 0 T 80
s Trachypithecus_geei.k141_1001272                           30507 2 +     46913 tc
i Trachypithecus_geei.k141_1001272                       C 0 T 80
s Trachypithecus_germaini.k141_57262                         11246 2 -     28527 tc
i Trachypithecus_germaini.k141_57262                     C 0 T 80
s Trachypithecus_hatinhensis.k141_31479                      32453 2 -     64340 tc
i Trachypithecus_hatinhensis.k141_31479                  C 0 T 80
s Trachypithecus_laotum.k141_928651                          30491 2 -     63452 tc
i Trachypithecus_laotum.k141_928651                      C 0 T 80
s Trachypithecus_leucocephalus.k141_96450                    11938 2 +     22490 tc
i Trachypithecus_leucocephalus.k141_96450                C 0 T 80
s Trachypithecus_melamera.k141_591572                         5304 2 -      6147 tc
i Trachypithecus_melamera.k141_591572                    C 0 T 80
s Trachypithecus_obscurus.k141_848057                        12217 2 -     13050 tc
i Trachypithecus_obscurus.k141_848057                    C 0 T 80
s Trachypithecus_phayrei.ctg124                             257381 2 -   6242583 tc
i Trachypithecus_phayrei.ctg124                          C 0 T 80
s Trachypithecus_pileatus.k141_2622778                        3477 2 +     19340 tc
i Trachypithecus_pileatus.k141_2622778                   C 0 T 80
s Tupaia_chinensis.KB320699.1                              1836709 2 -   4065304 tc
i Tupaia_chinensis.KB320699.1                            C 0 T 79
s Tupaia_tana.TupTan_flattened_line_394                      10740 2 -     70247 tc
i Tupaia_tana.TupTan_flattened_line_394                  C 0 T 79
s Varecia_rubra.k141_787544                                  26882 2 -     30710 tc
i Varecia_rubra.k141_787544                              C 0 T 75
s Varecia_variegata.k141_289850                              25789 2 -    147434 tc
i Varecia_variegata.k141_289850                          C 0 T 75
s Xerus_inauris.XerIna_scaffold_2302                        175751 2 -    224448 tc
i Xerus_inauris.XerIna_scaffold_2302                     C 0 T 79
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156 0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380 0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524 0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699 0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797 0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738 0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532 0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953 0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316 3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971 0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992 0 +  89631738 C
e Mus_musculus.chr8                                       41689686 0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513 0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334 0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274 0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506 0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850 0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914 0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042 0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275 0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536 2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700 0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8669 2 +     36723 gt
s Allenopithecus_nigroviridis.k141_3755588                   49687 2 +     53615 gt
i Allenopithecus_nigroviridis.k141_3755588               T 80 C 0
s Allochrocebus_lhoesti.k141_3412094                          1714 2 +     13857 gt
i Allochrocebus_lhoesti.k141_3412094                     T 80 C 0
s Allochrocebus_preussi.k141_1993939                         18269 2 -     21945 gt
i Allochrocebus_preussi.k141_1993939                     T 80 C 0
s Allochrocebus_solatus.k141_3554717                         19954 2 +     32033 gt
i Allochrocebus_solatus.k141_3554717                     T 80 C 0
s Alouatta_belzebul.k141_1011583                             73724 2 -     84148 gt
i Alouatta_belzebul.k141_1011583                         T 76 C 0
s Alouatta_caraya.k141_1109140                               45963 2 -     78289 gt
i Alouatta_caraya.k141_1109140                           T 76 C 0
s Alouatta_discolor.k141_2561099                             45402 2 +     55831 gt
i Alouatta_discolor.k141_2561099                         T 76 C 0
s Alouatta_juara.k141_1687208                                43852 2 -     64179 gt
i Alouatta_juara.k141_1687208                            T 76 C 0
s Alouatta_macconnelli.k141_1277969                            960 2 -      3959 gt
i Alouatta_macconnelli.k141_1277969                      T 76 C 0
s Alouatta_nigerrima.k141_376068                             42477 2 +     45454 gt
i Alouatta_nigerrima.k141_376068                         T 76 C 0
s Alouatta_palliata.k141_638677                              48126 2 +     70886 gt
i Alouatta_palliata.k141_638677                          T 76 C 0
s Alouatta_puruensis.k141_251022                             10299 2 +     30854 gt
i Alouatta_puruensis.k141_251022                         T 76 C 0
s Alouatta_seniculus.k141_928287                             34433 2 +     42133 gt
i Alouatta_seniculus.k141_928287                         T 76 C 0
s Aotus_azarae.k141_887050                                    2690 2 +     17741 gt
i Aotus_azarae.k141_887050                               T 52 C 0
s Aotus_griseimembra.k141_3192254                             3315 2 -     15923 gt
i Aotus_griseimembra.k141_3192254                        T 52 C 0
s Aotus_nancymaae.KZ198451.1                                673597 2 +   5030052 GT
i Aotus_nancymaae.KZ198451.1                             T 52 C 0
s Aotus_trivirgatus.k141_318729                               3591 2 -     16391 gt
i Aotus_trivirgatus.k141_318729                          T 52 C 0
s Aotus_vociferans.k141_1514463                               3150 2 -     17186 gt
i Aotus_vociferans.k141_1514463                          T 52 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25446 2 -     32367 gt
i Aplodontia_rufa.AprRuf_scaffold_46868                  T 77 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276189 2 +  21539123 gt
i Ateles_geoffroyi_b.tarseq_1536                            T 76 C 0
s Ateles_belzebuth.k141_1572163                              12355 2 +     48076 gt
i Ateles_belzebuth.k141_1572163                          T 76 C 0
s Ateles_chamek.k141_615173                                   7490 2 -     28759 gt
i Ateles_chamek.k141_615173                              T 76 C 0
s Ateles_geoffroyi_a.k141_1283730                              35046 2 +     44353 gt
i Ateles_geoffroyi_a.k141_1283730                          T 76 C 0
s Ateles_marginatus.k141_970259                              50415 2 -     71267 gt
i Ateles_marginatus.k141_970259                          T 76 C 0
s Ateles_paniscus.k141_866194                                24473 2 -     33135 gt
i Ateles_paniscus.k141_866194                            T 76 C 0
s Avahi_laniger.k141_2756659                                  7757 2 +     11645 gt
i Avahi_laniger.k141_2756659                             T 78 C 0
s Avahi_peyrierasi.k141_1823318                               7765 2 -     19611 gt
i Avahi_peyrierasi.k141_1823318                          T 78 C 0
s Cacajao_ayresi.k141_96119                                   9280 2 +     28062 gt
i Cacajao_ayresi.k141_96119                              T 76 C 0
s Cacajao_calvus.k141_89051                                  44574 2 -     91139 gt
i Cacajao_calvus.k141_89051                              T 76 C 0
s Cacajao_hosomi.k141_81245                                  22100 2 +     95584 gt
i Cacajao_hosomi.k141_81245                              T 76 C 0
s Cacajao_melanocephalus.k141_619699                         22013 2 +    119600 gt
i Cacajao_melanocephalus.k141_619699                     T 76 C 0
s Callibella_humilis.k141_1233062                            11666 2 +     18648 gt
i Callibella_humilis.k141_1233062                        T 76 C 0
s Callimico_goeldii.k141_1609886                             11181 2 -     13885 gt
i Callimico_goeldii.k141_1609886                         T 75 C 0
s Callithrix_geoffroyi.k119_459277                            3271 2 -      8861 gt
i Callithrix_geoffroyi.k119_459277                       T 76 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455660 2 + 189096842 gt
i Callithrix_jacchus.pat_scaffold_3                      T 76 C 0
s Callithrix_kuhlii.k119_102356                               3182 2 +      8664 gt
i Callithrix_kuhlii.k119_102356                          T 76 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    997 2 -      1607 aa
i Capromys_pilorides.CapPil_scaffold_762519              T 75 C 0
s Carlito_syrichta.NW_007259797.1                           272297 1 +    496798 -T
i Carlito_syrichta.NW_007259797.1                        T 77 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29168 2 -     39886 gt
i Castor_canadensis.CasCan_scaffold_39952                T 78 C 0
s Cavia_aperea.AVPZ01000300.1                              4997890 2 +  23392119 aa
i Cavia_aperea.AVPZ01000300.1                            T 69 C 0
s Cavia_porcellus.DS562891.1                               5001332 2 +  23407841 aa
i Cavia_porcellus.DS562891.1                             T 69 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64411 2 -     66877 aa
i Cavia_tschudii.CavTsc_scaffold_23560                   T 69 C 0
s Cebuella_niveiventris.k141_592277                           6581 2 -     12580 gt
i Cebuella_niveiventris.k141_592277                      T 76 C 0
s Cebuella_pygmaea.k141_145798                               44639 2 +     53515 gt
i Cebuella_pygmaea.k141_145798                           T 76 C 0
s Cebus_albifrons.Contig27                                  374394 2 -  26074798 gt
i Cebus_albifrons.Contig27                               T 75 C 0
s Cebus_olivaceus.k141_1404781                                9449 2 -     34880 gt
i Cebus_olivaceus.k141_1404781                           T 76 C 0
s Cebus_unicolor.k141_1654760                                68545 2 -     89041 gt
i Cebus_unicolor.k141_1654760                            T 76 C 0
s Cephalopachus_bancanus.k141_1689090                         4257 1 -      5494 -t
i Cephalopachus_bancanus.k141_1689090                    T 76 C 0
s Cercocebus_atys.KQ010504.1                                142769 2 -   4669795 GT
i Cercocebus_atys.KQ010504.1                             T 80 C 0
s Cercocebus_chrysogaster.k141_1522556                       46508 2 +     47900 gt
i Cercocebus_chrysogaster.k141_1522556                   T 80 C 0
s Cercocebus_lunulatus.k141_2500334                           1941 2 -     14410 gt
i Cercocebus_lunulatus.k141_2500334                      T 80 C 0
s Cercocebus_torquatus.k141_2159127                          46325 2 -    148725 gt
i Cercocebus_torquatus.k141_2159127                      T 80 C 0
s Cercopithecus_ascanius.k141_3120866                        28601 2 -     40656 gt
i Cercopithecus_ascanius.k141_3120866                    T 80 C 0
s Cercopithecus_cephus.k141_4183004                           8560 2 +     20796 gt
i Cercopithecus_cephus.k141_4183004                      T 80 C 0
s Cercopithecus_diana.k141_132293                            13674 2 -     17524 gt
i Cercopithecus_diana.k141_132293                        T 80 C 0
s Cercopithecus_hamlyni.k141_566925                          29406 2 -     34525 gt
i Cercopithecus_hamlyni.k141_566925                      T 80 C 0
s Cercopithecus_lowei.k141_2101310                           13186 2 -     25376 gt
i Cercopithecus_lowei.k141_2101310                       T 80 C 0
s Cercopithecus_albogularis.ctg5                                  365773 2 -  39242232 gt
i Cercopithecus_albogularis.ctg5                               T 80 C 0
s Cercopithecus_mona.ctg39                                  271500 2 +  21565898 gt
i Cercopithecus_mona.ctg39                               T 80 C 0
s Cercopithecus_neglectus.k141_858615                        33865 2 -     45857 gt
i Cercopithecus_neglectus.k141_858615                    T 80 C 0
s Cercopithecus_nictitans.k141_2995370                       28766 2 -     32606 gt
i Cercopithecus_nictitans.k141_2995370                   T 80 C 0
s Cercopithecus_petaurista.k141_42573                         4929 2 +      8499 gt
i Cercopithecus_petaurista.k141_42573                    T 80 C 0
s Cercopithecus_pogonias.k141_6079                           27327 2 +     70610 gt
i Cercopithecus_pogonias.k141_6079                       T 80 C 0
s Cercopithecus_roloway.k141_3012935                         24288 2 +     36323 gt
i Cercopithecus_roloway.k141_3012935                     T 80 C 0
s Cheirogaleus_major.k141_666340                             32164 2 -     33796 gc
i Cheirogaleus_major.k141_666340                         T 78 C 0
s Cheirogaleus_medius.k141_759766                             6667 2 -     15404 gc
i Cheirogaleus_medius.k141_759766                        T 78 C 0
s Cheracebus_lucifer.k141_2312002                            10387 2 -     32913 gt
i Cheracebus_lucifer.k141_2312002                        T 75 C 0
s Cheracebus_lugens.k141_1179667                             20800 2 -     40346 gt
i Cheracebus_lugens.k141_1179667                         T 75 C 0
s Cheracebus_regulus.k141_471822                             21055 2 +    216457 gt
i Cheracebus_regulus.k141_471822                         T 75 C 0
s Cheracebus_torquatus.k141_890198                           20844 2 +     39636 gt
i Cheracebus_torquatus.k141_890198                       T 75 C 0
s Chinchilla_lanigera.JH722012.1                           1240233 2 -   2543920 aa
i Chinchilla_lanigera.JH722012.1                         T 68 C 0
s Chiropotes_albinasus.k141_2628359                            509 2 +      1057 gt
i Chiropotes_albinasus.k141_2628359                      T 65 C 0
s Chiropotes_israelita.k141_313004                           43914 2 -    112038 gt
i Chiropotes_israelita.k141_313004                       T 65 C 0
s Chiropotes_sagulatus.k141_1113111                           9465 2 +     34062 gt
i Chiropotes_sagulatus.k141_1113111                      T 65 C 0
s Chlorocebus_aethiops.ctg25                                345189 2 +  18827391 gt
i Chlorocebus_aethiops.ctg25                             T 80 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11728 2 -     44032 gt
i Chlorocebus_pygerythrus.k141_3063162                   T 80 C 0
s Chlorocebus_sabaeus.CM001947.1                            306575 2 - 135778131 GT
i Chlorocebus_sabaeus.CM001947.1                         T 79 C 0
s Colobus_angolensis.KN981557.1                             410987 2 -   2368649 GT
i Colobus_angolensis.KN981557.1                          T 80 C 0
s Colobus_guereza.LG01                                      380869 2 - 200372422 gt
i Colobus_guereza.LG01                                   T 80 C 0
s Colobus_polykomos.k141_906115                               4426 2 -     84244 gt
i Colobus_polykomos.k141_906115                          T 80 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646875 2 -   1526836 gt
i Ctenodactylus_gundi.CteGun_scaffold_65                 T 77 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20070 2 +     50838 aa
i Ctenomys_sociabilis.CteSoc_scaffold_30159              T 75 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5806 2 +     36344 aa
i Cuniculus_paca.CunPac_flattened_line_7025              T 2851 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29590 2 +     75252 aa
i Dasyprocta_punctata.DasPun_flattened_line_15900        T 78 C 0
s Daubentonia_madagascariensis.ctg71                        294070 2 +  12879189 gt
i Daubentonia_madagascariensis.ctg71                     T 78 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100300 2 -    115145 aa
i Dinomys_branickii.DinBra_scaffold_10381                T 75 C 0
s Dipodomys_ordii.KN672350.1                              18952052 2 -  37912305 gt
i Dipodomys_ordii.KN672350.1                             T 84 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6982 2 -     10735 gt
i Dipodomys_stephensi.DipSte_scaffold_89095              T 84 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10689 2 +     14636 AA
i Dolichotis_patagonum.DolPat_scaffold_80628             T 69 C 0
s Erythrocebus_patas.Contig38                               264718 2 +  21539334 gt
i Erythrocebus_patas.Contig38                            T 78 C 0
s Eulemur_albifrons.k141_51491                               16286 2 -     24895 gt
i Eulemur_albifrons.k141_51491                           T 75 C 0
s Eulemur_collaris.k141_601111                               43996 2 -     70999 gt
i Eulemur_collaris.k141_601111                           T 75 C 0
s Eulemur_coronatus.k141_384460                              87966 2 +    112731 gt
i Eulemur_coronatus.k141_384460                          T 75 C 0
s Eulemur_flavifrons.k141_433119                             44529 2 +     68309 gt
i Eulemur_flavifrons.k141_433119                         T 75 C 0
s Eulemur_fulvus.k141_636316                                 54853 2 -     65740 gt
i Eulemur_fulvus.k141_636316                             T 75 C 0
s Eulemur_macaco.k141_1562045                                25486 2 -     75513 gt
i Eulemur_macaco.k141_1562045                            T 74 C 0
s Eulemur_mongoz.k141_232305                                 49680 2 -     97555 gt
i Eulemur_mongoz.k141_232305                             T 75 C 0
s Eulemur_rubriventer.k141_1423786                            6404 2 +     30972 gt
i Eulemur_rubriventer.k141_1423786                       T 75 C 0
s Eulemur_rufus.k141_514691                                  44124 2 -     52037 gt
i Eulemur_rufus.k141_514691                              T 75 C 0
s Eulemur_sanfordi.k141_1122526                              60527 2 -    111500 gt
i Eulemur_sanfordi.k141_1122526                          T 75 C 0
s Fukomys_damarensis.KN121974.1                            2923634 2 -   3816255 aa
i Fukomys_damarensis.KN121974.1                          T 78 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2666 2 -     28519 gt
i Galeopterus_variegatus.GalVar_scaffold_51812           T 78 C 0
s Glis_glis.GliGli_scaffold_163929                            2807 2 -      6791 at
i Glis_glis.GliGli_scaffold_163929                       T 78 C 0
s Gorilla_beringei.k141_3586045                              19411 2 -     19819 gt
i Gorilla_beringei.k141_3586045                          T 148 I 9
s Gorilla_gorilla.LT578341.1                                257832 2 - 186649187 gt
i Gorilla_gorilla.LT578341.1                             T 146 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3876 2 -     78134 gt
i Graphiurus_murinus.GraMur_scaffold_10447               T 78 I 9
s Hapalemur_alaotrensis.k141_330369                          16211 2 -     40692 gt
i Hapalemur_alaotrensis.k141_330369                      T 78 C 0
s Hapalemur_gilberti.k141_646465                             37610 2 +     49394 gt
i Hapalemur_gilberti.k141_646465                         T 78 C 0
s Hapalemur_griseus.k141_763500                              62481 2 -     66874 gt
i Hapalemur_griseus.k141_763500                          T 78 C 0
s Hapalemur_meridionalis.k141_258450                         11352 2 -     42923 gt
i Hapalemur_meridionalis.k141_258450                     T 78 C 0
s Hapalemur_occidentalis.k141_578367                         18354 2 -     53142 gt
i Hapalemur_occidentalis.k141_578367                     T 78 C 0
s Heterocephalus_glaber.JH602082.1                         1934021 2 -  22651954 ta
i Heterocephalus_glaber.JH602082.1                       T 72 C 0
s Hoolock_leuconedys.ctg274                                    144303 2 -    630532 gt
i Hoolock_leuconedys.ctg274                                 T 147 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73280 2 +    143317 aa
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        T 66 C 0
s Hylobates_agilis.k141_1155965                               7334 2 +     12352 gt
i Hylobates_agilis.k141_1155965                          T 147 C 0
s Hylobates_klossii.k141_738755                              14518 2 +     55766 gt
i Hylobates_klossii.k141_738755                          T 148 I 70
s Hylobates_pileatus_b.LG02                                       2054118 2 + 191637585 gt
i Hylobates_pileatus_b.LG02                                     T 78 C 0
s Hylobates_pileatus_a.tarseq_633                            7802996 2 +  11177569 gt
i Hylobates_pileatus_a.tarseq_633                          T 78 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8626 2 -    135385 aa
i Hystrix_cristata.HysCri_scaffold_5660                  T 76 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388340 2 +   7955117 gt
i Ictidomys_tridecemlineatus.JH393364.1                  T 79 C 0
s Indri_indri.k141_2415743                                    3899 2 +     11955 gt
i Indri_indri.k141_2415743                               T 78 C 0
s Lagothrix_lagothricha.k141_246028                          44740 2 +    110728 gt
i Lagothrix_lagothricha.k141_246028                      T 76 C 0
s Lemur_catta.scaffold_24                                 14761008 2 +  30322482 gt
i Lemur_catta.scaffold_24                                T 78 C 0
s Leontocebus_fuscicollis.k141_2994775                        5640 2 -     13097 gt
i Leontocebus_fuscicollis.k141_2994775                   T 76 C 0
s Leontocebus_illigeri.k141_2951200                           5394 2 +      5940 gt
i Leontocebus_illigeri.k141_2951200                      T 76 C 0
s Leontocebus_nigricollis.k141_3905062                        5217 2 -      5717 gt
i Leontocebus_nigricollis.k141_3905062                   T 76 C 0
s Leontopithecus_chrysomelas.k141_3286424                      369 2 +      8855 gt
i Leontopithecus_chrysomelas.k141_3286424                T 76 C 0
s Leontopithecus_rosalia.k141_1583055                         5171 2 -     13645 gt
i Leontopithecus_rosalia.k141_1583055                    T 76 C 0
s Lepilemur_ankaranensis.k141_567626                         10524 2 +     29618 gt
i Lepilemur_ankaranensis.k141_567626                     T 78 C 0
s Lepilemur_dorsalis.k141_387009                             10520 2 +     31569 gt
i Lepilemur_dorsalis.k141_387009                         T 78 C 0
s Lepilemur_ruficaudatus.k141_330196                         10530 2 +     24756 gt
i Lepilemur_ruficaudatus.k141_330196                     T 78 C 0
s Lepilemur_septentrionalis.k141_360456                      10530 2 +     16388 gt
i Lepilemur_septentrionalis.k141_360456                  T 78 C 0
s Lophocebus_aterrimus.ctg367                               335651 2 -   1826925 gt
i Lophocebus_aterrimus.ctg367                            T 80 C 0
s Macaca_arctoides.k141_1757516                              47043 2 -     61512 gt
i Macaca_arctoides.k141_1757516                          T 80 C 0
s Macaca_assamensis.Contig5                                 374705 2 -  60120075 gt
i Macaca_assamensis.Contig5                              T 80 C 0
s Macaca_cyclopis.k119_263443                                26973 2 +     30207 gt
i Macaca_cyclopis.k119_263443                            T 80 C 0
s Macaca_fascicularis.k141_1617581                            1811 2 -      5035 gt
i Macaca_fascicularis.k141_1617581                       T 80 C 0
s Macaca_fuscata.k119_546792                                 26926 2 +     30527 gt
i Macaca_fuscata.k119_546792                             T 80 C 0
s Macaca_leonina.k141_321385                                 38102 2 -     50087 gt
i Macaca_leonina.k141_321385                             T 80 C 0
s Macaca_maura.k141_1103459                                  47846 2 +     51645 gt
i Macaca_maura.k141_1103459                              T 80 C 0
s Macaca_mulatta.NC_041758.1                                417049 2 - 187317192 GT
i Macaca_mulatta.NC_041758.1                             T 80 C 0
s Macaca_nemestrina.KQ007038.1                              401279 2 +  25927173 GT
i Macaca_nemestrina.KQ007038.1                           T 80 C 0
s Macaca_nigra.k141_2818840                                  50451 2 -     62418 gt
i Macaca_nigra.k141_2818840                              T 80 C 0
s Macaca_radiata.k141_2139468                                 2982 2 +     14901 gt
i Macaca_radiata.k141_2139468                            T 80 C 0
s Macaca_siberu.k141_2185972                                 46923 2 +     59329 gt
i Macaca_siberu.k141_2185972                             T 80 C 0
s Macaca_silenus.Contig273                                  272831 2 +    668171 gt
i Macaca_silenus.Contig273                               T 80 C 0
s Macaca_thibetana.k99_45532                                  1463 2 -      5049 gt
i Macaca_thibetana.k99_45532                             T 80 C 0
s Macaca_tonkeana.k141_339739                                 4629 2 +     17132 gt
i Macaca_tonkeana.k141_339739                            T 80 C 0
s Mandrillus_leucophaeus.scaffold280                        324119 2 +  24302211 gt
i Mandrillus_leucophaeus.scaffold280                     T 80 C 0
s Mandrillus_sphinx.Contig270                               358950 2 -    752769 gt
i Mandrillus_sphinx.Contig270                            T 80 C 0
s Marmota_marmota.CZRN01000018.1                           7502553 2 +  40650429 gt
i Marmota_marmota.CZRN01000018.1                         T 79 C 0
s Mico_argentatus.k141_582562                                11764 2 +     17804 gt
i Mico_argentatus.k141_582562                            T 76 C 0
s Mico_humeralifer.k141_1180625                              12264 2 -     12984 gt
i Mico_humeralifer.k141_1180625                          T 76 C 0
s Mico_schneideri.k141_1877700                                     20583 2 -     26561 gt
i Mico_schneideri.k141_1877700                                 T 76 C 0
s Microcebus_murinus.CM007674.1                           74986362 2 +  93316391 GC
i Microcebus_murinus.CM007674.1                          T 78 C 0
s Miopithecus_ogouensis.k141_1534655                         24217 2 -     27822 gt
i Miopithecus_ogouensis.k141_1534655                     T 80 C 0
s Mirza_zaza.k141_766280                                     54137 2 -     62432 gt
i Mirza_zaza.k141_766280                                 T 78 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560                903 2 -    124358 GT
i Muscardinus_avellanarius.MusAve_scaffold_5560          T 75 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64585 2 +     67721 AA
i Myocastor_coypus.MyoCoy_scaffold_15261                 T 75 C 0
s Nasalis_larvatus.k141_1350636                              30994 2 +     34575 gt
i Nasalis_larvatus.k141_1350636                          T 80 C 0
s Nomascus_annamensis.k141_1771965                           55234 2 -    132029 gt
i Nomascus_annamensis.k141_1771965                       T 148 C 0
s Nomascus_concolor.k141_735679                              11329 2 -     16345 gt
i Nomascus_concolor.k141_735679                          T 148 C 0
s Nomascus_gabriellae.k141_57920                             17214 2 +     22201 gt
i Nomascus_gabriellae.k141_57920                         T 148 C 0
s Nomascus_siki_b.tarseq_93                            8415435 2 -  22158432 gt
i Nomascus_siki_b.tarseq_93                          T 148 C 0
s Nomascus_siki_a.k141_941534                                  27612 2 -     54323 gt
i Nomascus_siki_a.k141_941534                              T 148 C 0
s Octodon_degus.JH651603.1                                11056680 2 -  11899542 aa
i Octodon_degus.JH651603.1                               T 75 C 0
s Pan_paniscus.AJFE02004362.1                                  629 2 +      1339 gt
i Pan_paniscus.AJFE02004362.1                            T 148 C 0
s Pan_troglodytes.KZ622849.1                                 36568 2 -    110857 gt
i Pan_troglodytes.KZ622849.1                             T 148 C 0
s Papio_anubis.CM001495.2                                   245128 2 - 183742232 GT
i Papio_anubis.CM001495.2                                T 80 C 0
s Papio_cynocephalus.k141_1507553                            11413 2 +     21308 gt
i Papio_cynocephalus.k141_1507553                        T 80 C 0
s Papio_hamadryas.Contig39                                  294156 2 -  20919399 gt
i Papio_hamadryas.Contig39                               T 80 C 0
s Papio_kindae.k141_2214839                                  24053 2 -     27687 gt
i Papio_kindae.k141_2214839                              T 80 C 0
s Papio_papio.k141_3538738                                     732 2 +     10553 gt
i Papio_papio.k141_3538738                               T 80 C 0
s Papio_ursinus.k141_5784434                                   692 2 -     10386 gt
i Papio_ursinus.k141_5784434                             T 80 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3393 2 +      9367 at
i Perognathus_longimembris.PerPac_flattened_line_89005   T 79 C 0
s Piliocolobus_badius.k141_2704958                            4376 2 +     55023 gt
i Piliocolobus_badius.k141_2704958                       T 80 C 0
s Piliocolobus_gordonorum.k141_381342                         3898 2 -     89929 gt
i Piliocolobus_gordonorum.k141_381342                    T 80 C 0
s Piliocolobus_kirkii.k141_1310104                            4488 2 +     40849 gt
i Piliocolobus_kirkii.k141_1310104                       T 80 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256218 2 +  14605196 GT
i Piliocolobus_tephrosceles.PDMG02000141.1               T 80 C 0
s Pithecia_albicans.k141_1239476                             66282 2 +    207309 gt
i Pithecia_albicans.k141_1239476                         T 76 C 0
s Pithecia_chrysocephala.k141_785207                          7370 2 -     25401 gt
i Pithecia_chrysocephala.k141_785207                     T 76 C 0
s Pithecia_hirsuta.k141_640380                               33118 2 +     58159 gt
i Pithecia_hirsuta.k141_640380                           T 76 C 0
s Pithecia_mittermeieri.k141_1280039                         33394 2 +     63561 gt
i Pithecia_mittermeieri.k141_1280039                     T 76 C 0
s Pithecia_pissinattii.k141_878371                           33154 2 +     51148 gt
i Pithecia_pissinattii.k141_878371                       T 76 C 0
s Pithecia_pithecia.tarseq_165                              558124 2 -   4542175 gc
i Pithecia_pithecia.tarseq_165                           T 76 C 0
s Pithecia_vanzolinii.k141_1369553                           33138 2 +     51125 gt
i Pithecia_vanzolinii.k141_1369553                       T 76 C 0
s Plecturocebus_bernhardi.k141_2549090                        9556 2 +     39866 gt
i Plecturocebus_bernhardi.k141_2549090                   T 75 C 0
s Plecturocebus_brunneus.k141_862875                          4638 2 -      9282 gt
i Plecturocebus_brunneus.k141_862875                     T 75 C 0
s Plecturocebus_caligatus.k141_1382851                       44042 2 -     87950 gt
i Plecturocebus_caligatus.k141_1382851                   T 75 C 0
s Plecturocebus_cinerascens.k141_1164729                     44436 2 -     88961 gt
i Plecturocebus_cinerascens.k141_1164729                 T 75 C 0
s Plecturocebus_cupreus.k141_2351393                          9134 2 -     39403 gt
i Plecturocebus_cupreus.k141_2351393                     T 75 C 0
s Plecturocebus_dubius.k141_1058799                          44085 2 +     87928 gt
i Plecturocebus_dubius.k141_1058799                      T 75 C 0
s Plecturocebus_grovesi.k141_2013005                          9133 2 -     60166 gt
i Plecturocebus_grovesi.k141_2013005                     T 75 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16070 2 -     67232 gt
i Plecturocebus_hoffmannsi.k141_3303950                  T 75 C 0
s Plecturocebus_miltoni.k141_349282                          43986 2 -     90634 gt
i Plecturocebus_miltoni.k141_349282                      T 75 C 0
s Plecturocebus_moloch.k141_1031110                          45453 2 +     89403 gt
i Plecturocebus_moloch.k141_1031110                      T 75 C 0
s Pongo_abelii.CM009266.2                                   180988 2 - 189387572 GT
i Pongo_abelii.CM009266.2                                T 148 C 0
s Pongo_pygmaeus.ctg66                                      195728 2 -   9816681 gt
i Pongo_pygmaeus.ctg66                                   T 148 C 0
s Presbytis_comata.k141_1230337                              29576 2 +     69807 gt
i Presbytis_comata.k141_1230337                          T 80 C 0
s Presbytis_mitrata.k141_584736                              46757 2 -     80239 gt
i Presbytis_mitrata.k141_584736                          T 80 C 0
s Prolemur_simus.MPIZ01000396.1                            1984156 2 +   4620579 gt
i Prolemur_simus.MPIZ01000396.1                          T 78 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567651 2 -   2598838 gt
i Propithecus_coquerelli.NW_012148875.1                  T 78 C 0
s Propithecus_coronatus.k141_209299                           5289 2 -      7103 gt
i Propithecus_coronatus.k141_209299                      T 78 C 0
s Propithecus_diadema.k141_153680                             5886 2 -     11706 gt
i Propithecus_diadema.k141_153680                        T 78 C 0
s Propithecus_edwardsi.k141_635656                            9623 2 -     30655 gt
i Propithecus_edwardsi.k141_635656                       T 78 C 0
s Propithecus_perrieri.k141_1496898                          35937 2 +     46564 gt
i Propithecus_perrieri.k141_1496898                      T 78 C 0
s Propithecus_tattersalli.k141_1127767                       96216 2 -     98465 gt
i Propithecus_tattersalli.k141_1127767                   T 78 C 0
s Propithecus_verreauxi.k141_1047036                          9855 2 +     35169 gt
i Propithecus_verreauxi.k141_1047036                     T 78 C 0
s Pygathrix_cinerea.k141_1153803                             28943 2 +     91421 gt
i Pygathrix_cinerea.k141_1153803                         T 80 C 0
s Pygathrix_nigripes_b.ctg100                                  155495 2 -   7812017 gt
i Pygathrix_nigripes_b.ctg100                               T 80 C 0
s Pygathrix_nigripes_a.k141_215492                              9800 2 +     72585 gt
i Pygathrix_nigripes_a.k141_215492                         T 80 C 0
s Rhinopithecus_bieti.k119_778604                             3407 2 +      7119 gt
i Rhinopithecus_bieti.k119_778604                        T 80 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124077 2 + 195417433 GT
i Rhinopithecus_roxellana.NC_044550.1                    T 80 C 0
s Rhinopithecus_strykeri.ctg102                             238249 2 -   7961872 gt
i Rhinopithecus_strykeri.ctg102                          T 80 C 0
s Saguinus_bicolor.k141_2012906                                509 2 -      1130 gt
i Saguinus_bicolor.k141_2012906                          T 76 C 0
s Saguinus_geoffroyi.k141_3779887                             5406 2 +      6077 gt
i Saguinus_geoffroyi.k141_3779887                        T 76 C 0
s Saguinus_imperator.k141_1898058                             5500 2 +      5971 ct
i Saguinus_imperator.k141_1898058                        T 76 C 0
s Saguinus_inustus.k141_2469308                               5417 2 +      5932 gt
i Saguinus_inustus.k141_2469308                          T 76 C 0
s Saguinus_labiatus.k141_2380921                              3762 2 -      4390 gt
i Saguinus_labiatus.k141_2380921                         T 76 C 0
s Saguinus_midas.LG03                                       393519 2 - 209938924 gt
i Saguinus_midas.LG03                                    T 76 C 0
s Saguinus_mystax.k141_8077960                                5365 2 +      5979 ct
i Saguinus_mystax.k141_8077960                           T 76 C 0
s Saguinus_oedipus.k141_1280589                               1935 2 -     22275 gt
i Saguinus_oedipus.k141_1280589                          T 76 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110535 2 + 121099817 GT
i Saimiri_boliviensis.NW_024100920.1                     T 76 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32102 2 -     47369 gt
i Saimiri_cassiquiarensis.k141_1467335                   T 76 C 0
s Saimiri_macrodon.k141_1173117                              32488 2 -     79414 gt
i Saimiri_macrodon.k141_1173117                          T 76 C 0
s Saimiri_oerstedii.k141_245838                              29179 2 -     34454 gt
i Saimiri_oerstedii.k141_245838                          T 76 C 0
s Saimiri_sciureus.k141_1467173                              16580 2 -     22428 gt
i Saimiri_sciureus.k141_1467173                          T 76 C 0
s Saimiri_ustus.k141_360372                                  31734 2 -     47109 gt
i Saimiri_ustus.k141_360372                              T 76 C 0
s Sapajus_apella.ctg103                                     239769 2 +   5703754 gt
i Sapajus_apella.ctg103                                  T 76 C 0
s Sapajus_macrocephalus.k141_796559                           9359 2 +     21866 gt
i Sapajus_macrocephalus.k141_796559                      T 76 C 0
s Semnopithecus_entellus.k141_583282                           382 2 +     11297 gt
i Semnopithecus_entellus.k141_583282                     T 80 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30775 2 +     58920 gt
i Semnopithecus_hypoleucos.k141_1910531                  T 80 C 0
s Semnopithecus_johnii.k141_843753                           17273 2 -     45317 gt
i Semnopithecus_johnii.k141_843753                       T 80 C 0
s Semnopithecus_priam.k141_714795                            24931 2 -     42441 gt
i Semnopithecus_priam.k141_714795                        T 80 C 0
s Semnopithecus_schistaceus.k141_1432920                     27607 2 -     29113 gt
i Semnopithecus_schistaceus.k141_1432920                 T 80 C 0
s Semnopithecus_vetulus.k141_244474                          30684 2 -     48123 gt
i Semnopithecus_vetulus.k141_244474                      T 80 C 0
s Spermophilus_dauricus.KZ294078.1                         1869918 2 +   3870691 gt
i Spermophilus_dauricus.KZ294078.1                       T 79 C 0
s Symphalangus_syndactylus.tarseq_199                       392700 2 +   1523678 gt
i Symphalangus_syndactylus.tarseq_199                    T 148 C 0
s Tarsius_lariang.k141_1733899                                2210 1 +      9917 -t
i Tarsius_lariang.k141_1733899                           T 77 C 0
s Tarsius_wallacei.k141_226975                                9008 1 +     20590 -t
i Tarsius_wallacei.k141_226975                           T 77 C 0
s Theropithecus_gelada.CM009954.1                           354937 2 - 186847797 GT
i Theropithecus_gelada.CM009954.1                        T 80 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25767 2 -     33621 at
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          T 78 C 0
s Trachypithecus_auratus.k141_1189070                        22685 2 +     26378 gt
i Trachypithecus_auratus.k141_1189070                    T 80 C 0
s Trachypithecus_crepusculus.k141_539312                     35484 2 -     78344 gt
i Trachypithecus_crepusculus.k141_539312                 T 80 C 0
s Trachypithecus_cristatus.k141_180416                       22010 2 +     25722 gt
i Trachypithecus_cristatus.k141_180416                   T 80 C 0
s Trachypithecus_francoisi.k141_1453105                      30440 2 -     62838 gt
i Trachypithecus_francoisi.k141_1453105                  T 80 C 0
s Trachypithecus_geei.k141_1001272                           30429 2 +     46913 gt
i Trachypithecus_geei.k141_1001272                       T 80 C 0
s Trachypithecus_germaini.k141_57262                         11168 2 -     28527 gt
i Trachypithecus_germaini.k141_57262                     T 80 C 0
s Trachypithecus_hatinhensis.k141_31479                      32375 2 -     64340 gt
i Trachypithecus_hatinhensis.k141_31479                  T 80 C 0
s Trachypithecus_laotum.k141_928651                          30413 2 -     63452 gt
i Trachypithecus_laotum.k141_928651                      T 80 C 0
s Trachypithecus_leucocephalus.k141_96450                    11860 2 +     22490 gt
i Trachypithecus_leucocephalus.k141_96450                T 80 C 0
s Trachypithecus_melamera.k141_591572                         5226 2 -      6147 gt
i Trachypithecus_melamera.k141_591572                    T 80 C 0
s Trachypithecus_obscurus.k141_848057                        12139 2 -     13050 gt
i Trachypithecus_obscurus.k141_848057                    T 80 C 0
s Trachypithecus_phayrei.ctg124                             257303 2 -   6242583 gt
i Trachypithecus_phayrei.ctg124                          T 80 C 0
s Trachypithecus_pileatus.k141_2622778                        3399 2 +     19340 gt
i Trachypithecus_pileatus.k141_2622778                   T 80 C 0
s Tupaia_chinensis.KB320699.1                              1836632 2 -   4065304 gg
i Tupaia_chinensis.KB320699.1                            T 79 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10663 2 -     70247 gg
i Tupaia_tana.TupTan_flattened_line_394                  T 79 C 0
s Varecia_rubra.k141_787544                                  26809 2 -     30710 gt
i Varecia_rubra.k141_787544                              T 75 C 0
s Varecia_variegata.k141_289850                              25716 2 -    147434 gt
i Varecia_variegata.k141_289850                          T 75 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175674 2 -    224448 gt
i Xerus_inauris.XerIna_scaffold_2302                     T 79 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156 0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Petromus_typicus.PetTyp_scaffold_17301                     33628 52 -     56120 T
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380 0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524 0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699 0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797 0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738 0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532 0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953 0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316 3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971 0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992 0 +  89631738 C
e Mus_musculus.chr8                                       41689686 0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513 0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334 0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274 0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506 0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850 0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914 0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042 0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275 0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536 2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700 0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8671 9 +     36723 gcctgctga
s Allenopithecus_nigroviridis.k141_3755588                   49689 9 +     53615 gcctgctga
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1716 9 +     13857 gcctgctga
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18271 9 -     21945 gcctgctga
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19956 9 +     32033 gcctgctga
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73726 9 -     84148 gcctaccga
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45965 9 -     78289 gcctaccga
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45404 9 +     55831 gcctaccga
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43854 9 -     64179 gcctaccga
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            962 9 -      3959 gcctaccga
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42479 9 +     45454 gcctaccga
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48128 9 +     70886 gcctaccga
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10301 9 +     30854 gcctaccga
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34435 9 +     42133 gcctaccga
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2692 9 +     17741 gcctactga
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3317 9 -     15923 gcctactga
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673599 9 +   5030052 GCCTACTGA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3593 9 -     16391 gcctactga
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3152 9 -     17186 gcctactga
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25448 9 -     32367 gtctgatga
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276191 9 +  21539123 gcctcctga
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12357 9 +     48076 gcctcctga
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7492 9 -     28759 gcctcctaa
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35048 9 +     44353 gcctcctga
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50417 9 -     71267 gcctcctga
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24475 9 -     33135 gcctcctga
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7759 9 +     11645 gtctgatga
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7767 9 -     19611 gtctgatga
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9282 9 +     28062 gcctgctga
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44576 9 -     91139 gcctgctga
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22102 9 +     95584 gcctgctga
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22015 9 +    119600 gcctgctga
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11668 9 +     18648 gcctactga
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11183 9 -     13885 gcctactga
i Callimico_goeldii.k141_1609886                         C 0 I 2
s Callithrix_geoffroyi.k119_459277                            3273 9 -      8861 gcctactga
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455662 9 + 189096842 gcctactga
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3184 9 +      8664 gcctactga
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                    999 9 -      1607 attggatga
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272298 9 +    496798 GTCTATTGA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29170 9 -     39886 gtcttatga
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997892 7 +  23392119 actgggg--
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001334 7 +  23407841 actgggg--
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64413 7 -     66877 actgggg--
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6583 9 -     12580 gcctactga
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44641 9 +     53515 gcctactga
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374396 9 -  26074798 gcctactga
i Cebus_albifrons.Contig27                               C 0 T 1830
s Cebus_olivaceus.k141_1404781                                9451 9 -     34880 gcctactga
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68547 9 -     89041 gcctactga
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4258 9 -      5494 gtctactga
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                142771 9 -   4669795 GCCTGCTGA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46510 9 +     47900 gcctgctga
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1943 9 -     14410 gcctgctga
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46327 9 -    148725 gcctgctga
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28603 9 -     40656 gcctgctga
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8562 9 +     20796 gcctgctga
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13676 9 -     17524 gcctgctga
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29408 9 -     34525 gcctgctga
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13188 9 -     25376 gcctgctga
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365775 9 -  39242232 gcctgctga
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271502 9 +  21565898 gcctgctga
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33867 9 -     45857 gcctgctga
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28768 9 -     32606 gcctgctga
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4931 9 +      8499 gcctgccga
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27329 9 +     70610 gcctgctga
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24290 9 +     36323 gcctgctga
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32166 9 -     33796 gtctgatga
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6669 9 -     15404 atctgatga
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10389 9 -     32913 gcctgctga
i Cheracebus_lucifer.k141_2312002                        C 0 I 2
s Cheracebus_lugens.k141_1179667                             20802 9 -     40346 gcctgctga
i Cheracebus_lugens.k141_1179667                         C 0 I 2
s Cheracebus_regulus.k141_471822                             21057 9 +    216457 gcctgctga
i Cheracebus_regulus.k141_471822                         C 0 I 2
s Cheracebus_torquatus.k141_890198                           20846 9 +     39636 gcctgctga
i Cheracebus_torquatus.k141_890198                       C 0 I 2
s Chinchilla_lanigera.JH722012.1                           1240235 9 -   2543920 attggatga
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            511 9 +      1057 gcctactga
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43916 9 -    112038 gcctgctga
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9467 9 +     34062 gcctgctga
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345191 9 +  18827391 gcctgctga
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11730 9 -     44032 gcctgctga
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306577 9 - 135778131 GCCCGCTGA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             410989 9 -   2368649 GCCTGCTGA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380871 9 - 200372422 gcctgctga
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4428 9 -     84244 gcctgctga
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646877 9 -   1526836 atctgatga
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20072 9 +     50838 actggatga
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5808 9 +     36344 attggataa
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29592 9 +     75252 attggataa
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294072 9 +  12879189 gtccgatga
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100302 9 -    115145 attggatga
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952054 9 -  37912305 gccctgtga
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6984 9 -     10735 gccctgtga
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10691 7 +     14636 ATTGGGT--
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Erythrocebus_patas.Contig38                               264720 9 +  21539334 gcctgctga
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16288 9 -     24895 gtctgatga
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               43998 9 -     70999 gtctgatga
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87968 9 +    112731 gtctgatga
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44531 9 +     68309 gtctgatga
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54855 9 -     65740 gtctgatga
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25488 9 -     75513 gtctgatga
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49682 9 -     97555 gtctgatga
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6406 9 +     30972 gtctgatga
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44126 9 -     52037 gtctgatga
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60529 9 -    111500 gtctgatga
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923636 9 -   3816255 atatgatgg
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2668 9 -     28519 gtctggtga
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2809 9 -      6791 atctgataa
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_420802                                 955 9 -      1361 gcctgctga
i Gorilla_beringei.k141_420802                           T 144 I 80
s Gorilla_gorilla.LT578341.1                                257834 9 - 186649187 gcctgctga
i Gorilla_gorilla.LT578341.1                             C 0 I 45
s Graphiurus_murinus.GraMur_scaffold_71094                     293 9 +     16254 GTCTGGGGA
i Graphiurus_murinus.GraMur_scaffold_71094               T 9 I 55
s Hapalemur_alaotrensis.k141_330369                          16213 9 -     40692 gtctgatga
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37612 9 +     49394 gtctgatga
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62483 9 -     66874 gtctgatga
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11354 9 -     42923 gtctgatga
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18356 9 -     53142 gtctgatga
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934023 9 -  22651954 atctgatga
i Heterocephalus_glaber.JH602082.1                       C 0 I 12
s Hoolock_leuconedys.ctg274                                    144305 9 -    630532 gcctgctga
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73282 7 +    143317 attgggt--
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7336 9 +     12352 gcctgctga
i Hylobates_agilis.k141_1155965                          C 0 I 69
s Hylobates_klossii.k141_738755                              14590 9 +     55766 gcctgctga
i Hylobates_klossii.k141_738755                          I 70 C 0
s Hylobates_pileatus_b.LG02                                       2054120 9 + 191637585 gcctgctga
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7802998 9 +  11177569 gcctgctga
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8628 9 -    135385 atctgatga
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388342 9 +   7955117 gtctaatga
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3901 9 +     11955 gtctaatga
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44742 9 +    110728 gcctcctga
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14761010 9 +  30322482 gtctgatga
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5642 9 -     13097 gcctactga
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5396 9 +      5940 gcctactga
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5219 9 -      5717 gcctactga
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      371 9 +      8855 gcctaccga
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5173 9 -     13645 gcctaccga
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10526 9 +     29618 gtctgatga
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10522 9 +     31569 gtctgatga
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10532 9 +     24756 gtctgatga
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10532 9 +     16388 gtctgatga
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               335653 9 -   1826925 gcctgctga
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47045 9 -     61512 gcctgctga
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374707 9 -  60120075 gcctgctga
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26975 9 +     30207 gcctgctga
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1813 9 -      5035 gcctgctga
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26928 9 +     30527 gcctgctga
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38104 9 -     50087 gcctgctga
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47848 9 +     51645 gcctgctga
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417051 9 - 187317192 GCCTGCTGA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401281 9 +  25927173 GCCTGCTGA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50453 9 -     62418 gcctgctga
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2984 9 +     14901 gcctgctga
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46925 9 +     59329 gcctgctga
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272833 9 +    668171 gcctgctga
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1465 9 -      5049 gcctgctga
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4631 9 +     17132 gcctgctga
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324121 9 +  24302211 gcctgctga
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358952 9 -    752769 gcctgctga
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502555 9 +  40650429 gtctaatga
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_582562                                11766 9 +     17804 gcctactga
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12266 9 -     12984 gcctactga
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20585 9 -     26561 gcctactga
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986364 9 +  93316391 ATCTGATGA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24219 9 -     27822 gcctgctga
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54139 9 -     62432 gtctgatga
i Mirza_zaza.k141_766280                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560                905 9 -    124358 GTCTGATGA
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64587 9 +     67721 GTTGGATGA
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              30996 9 +     34575 gcctgctga
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55236 9 -    132029 gcctgctga
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11331 9 -     16345 gcctgctga
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17216 9 +     22201 gcctgctga
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415437 9 -  22158432 gcctgctga
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27614 9 -     54323 gcctgctga
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Octodon_degus.JH651603.1                                11056682 9 -  11899542 attggatga
i Octodon_degus.JH651603.1                               C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  631 9 +      1339 ggctgctga
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.KZ622849.1                                 36570 9 -    110857 ggctgctga
i Pan_troglodytes.KZ622849.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   245130 9 - 183742232 GCCTGCTGA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11415 9 +     21308 gcctgctga
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294158 9 -  20919399 gcctgctga
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24055 9 -     27687 gcctgctga
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     734 9 +     10553 gcctgctga
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   694 9 -     10386 gcctgctga
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3395 9 +      9367 gccctgtga
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Piliocolobus_badius.k141_2704958                            4378 9 +     55023 gcctgctga
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3900 9 -     89929 gcctgctga
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4490 9 +     40849 gcctgctga
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256220 9 +  14605196 GCCTGCTGA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66284 9 +    207309 gcctgctga
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7372 9 -     25401 gcctgctga
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33120 9 +     58159 gcctgctga
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33396 9 +     63561 gcctgctga
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33156 9 +     51148 gcctgctga
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558126 9 -   4542175 gcctgctga
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33140 9 +     51125 gcctgctga
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9558 9 +     39866 gcctgctga
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 2
s Plecturocebus_brunneus.k141_862875                          4640 9 -      9282 gcctgctga
i Plecturocebus_brunneus.k141_862875                     C 0 I 2
s Plecturocebus_caligatus.k141_1382851                       44044 9 -     87950 gcctgctga
i Plecturocebus_caligatus.k141_1382851                   C 0 I 2
s Plecturocebus_cinerascens.k141_1164729                     44438 9 -     88961 gcctgctga
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 2
s Plecturocebus_cupreus.k141_2351393                          9136 9 -     39403 gcctgctga
i Plecturocebus_cupreus.k141_2351393                     C 0 I 2
s Plecturocebus_dubius.k141_1058799                          44087 9 +     87928 gcctgctga
i Plecturocebus_dubius.k141_1058799                      C 0 I 2
s Plecturocebus_grovesi.k141_2013005                          9135 9 -     60166 gcctgctga
i Plecturocebus_grovesi.k141_2013005                     C 0 I 2
s Plecturocebus_hoffmannsi.k141_3303950                      16072 9 -     67232 gcctgctga
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 2
s Plecturocebus_miltoni.k141_349282                          43988 9 -     90634 gcctgctga
i Plecturocebus_miltoni.k141_349282                      C 0 I 2
s Plecturocebus_moloch.k141_1031110                          45455 9 +     89403 gcctgctga
i Plecturocebus_moloch.k141_1031110                      C 0 I 2
s Pongo_abelii.CM009266.2                                   180990 9 - 189387572 GCCTGCTGA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195730 9 -   9816681 gcctgctga
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29578 9 +     69807 gcctgctga
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46759 9 -     80239 gcctgctga
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984158 9 +   4620579 gtctgatga
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567653 9 -   2598838 gtctgatga
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5291 9 -      7103 gtctgatga
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5888 9 -     11706 gtctgatga
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9625 9 -     30655 gcctgatga
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35939 9 +     46564 gtctgatga
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96218 9 -     98465 gtctgatga
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9857 9 +     35169 gtctgatga
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28945 9 +     91421 gcctgctga
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155497 9 -   7812017 gcctgctga
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9802 9 +     72585 gcctgctga
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3409 9 +      7119 gcctgctga
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124079 9 + 195417433 GCCTGCTGA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238251 9 -   7961872 gcctgctga
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2012906                                511 9 -      1130 gcctactga
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5408 9 +      6077 gcctactga
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5502 9 +      5971 gcctgctga
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5419 9 +      5932 gtctgctga
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3764 9 -      4390 gcctgctga
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393521 9 - 209938924 gcctactga
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5367 9 +      5979 gcctgctga
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1937 9 -     22275 gcctactga
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110537 9 + 121099817 GCCTACTGA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32104 9 -     47369 gcctactga
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32490 9 -     79414 gcctactga
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29181 9 -     34454 gcctactga
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16582 9 -     22428 gcctactga
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31736 9 -     47109 gcctactga
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239771 9 +   5703754 gcctactga
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9361 9 +     21866 gcctactga
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                           384 9 +     11297 gcctgctga
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30777 9 +     58920 gcctgctga
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17275 9 -     45317 gcctgctga
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24933 9 -     42441 gcctgctga
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27609 9 -     29113 gcctgctga
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30686 9 -     48123 gcctgctga
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869920 9 +   3870691 gtctaatga
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392702 9 +   1523678 gcctgctga
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2211 9 +      9917 gtctactgg
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9009 9 +     20590 gtctattgg
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354939 9 - 186847797 GCCTGCTGA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25769 9 -     33621 acctgatga
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22687 9 +     26378 gcctgctga
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35486 9 -     78344 gcctgctga
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22012 9 +     25722 gcctgctga
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30442 9 -     62838 gcctgctga
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30431 9 +     46913 gcctgctga
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11170 9 -     28527 gcctgctga
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32377 9 -     64340 gcctgctga
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30415 9 -     63452 gcctgctga
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11862 9 +     22490 gcctgctga
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5228 9 -      6147 gcctgctga
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12141 9 -     13050 gcctgctga
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257305 9 -   6242583 gcctgctga
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3401 9 +     19340 gcctgctga
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836634 9 -   4065304 gtctaatga
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10665 9 -     70247 gtctaacga
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  26811 9 -     30710 gtctgatga
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25718 9 -    147434 gtctgatga
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175676 9 -    224448 ttctgaaga
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156 0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Petromus_typicus.PetTyp_scaffold_17301                     33628 52 -     56120 T
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380 0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524 0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699 0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797 0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738 0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532 0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953 0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316 3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971 0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992 0 +  89631738 C
e Mus_musculus.chr8                                       41689686 0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513 0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334 0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274 0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506 0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850 0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914 0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042 0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275 0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536 2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700 0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8680 45 +     36723 gggccca-tgca---tcat---ggatggagtcttctg-tatgtcctcatatgg
s Allenopithecus_nigroviridis.k141_3755588                   49698 45 +     53615 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1725 45 +     13857 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18280 45 -     21945 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         19965 45 +     32033 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73735 38 -     84148 gggccca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               45974 38 -     78289 gggccca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45413 38 +     55831 gggccca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43863 38 -     64179 gggccca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                            971 38 -      3959 gggcata-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42488 38 +     45454 gggccca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48137 38 +     70886 gggccca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10310 38 +     30854 gggccca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34444 38 +     42133 gggcaca-ttcc---tcat---agatgg--tctcctc-tatgtcctca-----
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2701 14 +     17741 gggccca-ttcc---tca-----------------------------------
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3326 14 -     15923 gggccca-ttcc---tca-----------------------------------
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673608 14 +   5030052 GGGCCCA-TTCC---TCA-----------------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3602 14 -     16391 gggccca-ttcc---tca-----------------------------------
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3161 14 -     17186 gggccca-ttcc---tca-----------------------------------
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25457 40 -     32367 agcagtg-tttc---tcgt---agatggtgacttatt-tgtatcttca-----
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276200 38 +  21539123 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12366 38 +     48076 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7501 38 -     28759 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35057 38 +     44353 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50426 38 -     71267 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24484 38 -     33135 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7768 40 +     11645 gggcctg-gtct---tcag---agttggagacttcta-catgttctca-----
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7776 40 -     19611 gggcctg-gtct---tcag---agttggagacttcta-catgttctta-----
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9291 38 +     28062 gggccca-ttcc---tcat---agatgg--tcttctc-tgtgtcctca-----
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44585 38 -     91139 gggccca-ttcc---tcat---agatgg--tcttccc-tgtgtcctca-----
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22111 38 +     95584 gggccca-ttcc---tcat---agatgg--tcttctc-tgtgtcctca-----
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22024 38 +    119600 gggccca-ttcc---tcat---agatgg--tcttctc-tgtgtcctca-----
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11677 38 +     18648 ggaccac-ttcc---tcat---agttgg--tcttctc-catgtcctca-----
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11194 35 -     13885 ---ccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Callimico_goeldii.k141_1609886                         I 2 C 0
s Callithrix_geoffroyi.k119_459277                            3282 38 -      8861 gggccac-ttcc---tcat---agatgg--ccttctc-catgtcctca-----
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455671 38 + 189096842 gggccac-ttcc---tcat---agatgg--ccttctc-catgtcctca-----
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3193 38 +      8664 gggccac-ttcc---tcat---aggtgg--ccttctc-catgtcctca-----
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1008 37 -      1607 taa-ct-gtttc---ttat---agatgttgcctttta-t--gtccaca-----
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272307 40 +    496798 GTGCTTG-TCCC---TCAA---AGATGAAATTTTCTa-catgtcctca-----
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29179 40 -     39886 gggctgg-tttc---tcac---agatggtgccttcta-tatgtcttca-----
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997899 33 +  23392119 --------tttc---tcat---aggtggtacctttta-tgtgtcctca-----
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001341 33 +  23407841 --------tttc---tcat---aggtggtacctttta-tgcatcctca-----
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64420 33 -     66877 --------tttc---tcat---aggtggtacctttta-tgcatcctca-----
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6592 38 -     12580 gggccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44650 38 +     53515 gggccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  372575 35 -  26074798 ---ccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Cebus_albifrons.Contig27                               T 1830 I 1832
s Cebus_olivaceus.k141_1404781                                9460 38 -     34880 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68556 38 -     89041 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4267 40 -      5494 gcgcttg-ttcc---tcaa---agatgaaattctcta-catgtcctca-----
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                142780 45 -   4669795 GGGCCCA-TTCG---TCAT---AGATGGAGTCTTCtg-tgtgtcctcatatgg
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46519 45 +     47900 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1952 45 -     14410 gggccca-ttcg---tcat---agacggagtcttctg-tgtgtcctcatatgg
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46336 45 -    148725 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28612 45 -     40656 gggccca-tttg---tcat---agatagagtcttctg-tgtgtcctcatatgg
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8571 45 +     20796 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13685 45 -     17524 gggccca-tttg---tcat---agatggagacttctt-tgtgtcctcatatgg
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29417 45 -     34525 gggccca-tttg---tcat---agatggagtcttctg-tgtgtccttatatgg
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13197 45 -     25376 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365784 45 -  39242232 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271511 45 +  21565898 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33876 45 -     45857 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28777 45 -     32606 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4940 45 +      8499 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27338 45 +     70610 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24299 45 +     36323 gggccca-tttg---tcgt---agatggagtcttctg-tgtgtcctcatatgg
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32175 40 -     33796 gggccca-ttct---tcat---agttagagacttcta-cgtgttctca-----
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6678 40 -     15404 gggccca-ttct---tcat---agttggagacttcta-tgtgttctca-----
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10400 35 -     32913 ---ccca-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Cheracebus_lucifer.k141_2312002                        I 2 C 0
s Cheracebus_lugens.k141_1179667                             20813 35 -     40346 ---ccca-ttcc---tcat---aaacgg--tcttccc-tgtgtcctca-----
i Cheracebus_lugens.k141_1179667                         I 2 C 0
s Cheracebus_regulus.k141_471822                             21068 35 +    216457 ---ccca-ttcc---tcat---agacgg--tcttccc-tgtgccctca-----
i Cheracebus_regulus.k141_471822                         I 2 C 0
s Cheracebus_torquatus.k141_890198                           20857 35 +     39636 ---ccca-ttcc---tcat---agacgg--tcttccc-tgtgccctca-----
i Cheracebus_torquatus.k141_890198                       I 2 C 0
s Chinchilla_lanigera.JH722012.1                           1240244 32 -   2543920 agacct-attcc---tc-----------tacctttca-tgtgtcttca-----
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            520 38 +      1057 gggccag-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Chiropotes_albinasus.k141_2628359                      C 0 C 0
s Chiropotes_israelita.k141_313004                           43925 38 -    112038 gggccca-ttcc---tcat---agatgg--tcttctc-tgtgtcctca-----
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9476 38 +     34062 gggccca-ttcc---tcat---agatgg--tcttctc-tgtgtcctca-----
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345200 45 +  18827391 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11739 45 -     44032 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306586 44 - 135778131 GGGCCCA-TTTG---TCAT---AGATGGAGTCTTCTG-tg-gtcctcacatgg
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             410998 45 -   2368649 GGTCCCA-TTCG---TCAT---AGATGGAGTCTTCtg-tgtgtcctcatatgg
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380880 45 - 200372422 ggtccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4437 45 -     84244 ggtccca-ttcg---tcat---agatggagtcttcta-tgtgtcctcatatgg
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646886 39 -   1526836 agcctgt-ttcc---tcat---agac-gtaccttcca-cgagttcttt-----
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20081 37 +     50838 aaa-ct-gtttc---ttat---agatgatacctttta-t--gtcctca-----
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5817 40 +     36344 agacct-gttcc---tcat---agatggtagctttta-tgtgtgtaca-----
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29601 40 +     75252 agacct-atttc---tcat---agatggttccttttc-tgtgtcctca-----
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294081 40 +  12879189 gggcctg-tttt---tcat---agttggagacgtcta-tgtgttctca-----
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100311 40 -    115145 agactt-gttcc---tcat---aggtggtacctttta-tgtgtcttca-----
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952063 37 -  37912305 gggtc----ttc---taac---agaagatgcctttgg-tgtgtcgtca-----
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   6993 37 -     10735 gggtc----ttc---taac---agaagatgcctttgg-tgtgtcgtca-----
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10698 33 +     14636 --------TTTC---Ccat---agatggtatctttaa-tgcatcctca-----
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Erythrocebus_patas.Contig38                               264729 43 +  21539334 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctc--atgg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16297 37 -     24895 gggcctg----t---tcat---agttggagacttcta-catgttctca-----
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               44007 37 -     70999 gggcctg----t---tcat---agttggagacttcta-catgttctca-----
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              87977 37 +    112731 gggcctg-ttc------at---agttggagacttcta-catgttctca-----
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44540 37 +     68309 gggcctg-ttc------at---agttggagacttcta-catgttctcc-----
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54864 37 -     65740 gggcctg----t---tcat---agttggagacttcta-catgttctca-----
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25497 36 -     75513 gggccg-----t---tcat---agttggagacttcta-catgttctcc-----
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49691 37 -     97555 gggcctg----t---tcat---agttggagacttcta-catgttctca-----
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6415 37 +     30972 gggcctg----t---tcat---agttggagacttcta-catgttctca-----
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44135 37 -     52037 gggcctg----t---tcat---agttggagacttcta-catgttctca-----
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60538 37 -    111500 gggcctg----t---tcat---agttggagacttcta-catgttctca-----
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923645 40 -   3816255 aggcct-gtttcttg---t---agatggtaccattta-tgtattttca-----
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2677 40 -     28519 gggcctg-ttcc---tcac---agatgtggccatcta-tgtgtcctca-----
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2818 40 -      6791 ggacctg-tttc---tcat---agatggtgccttctt-catgtcctca-----
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3586045                              19422 45 -     19819 gggccca-ttca---tcat---agatggagtcttctg-tacgtcctcatatgg
i Gorilla_beringei.k141_3586045                          I 9 C 0
s Gorilla_gorilla.LT578336.1                                 74339 45 +  33314783 gggccca-ttca---tcat---agatggagtcttctg-tatgtcctcatatgg
i Gorilla_gorilla.LT578336.1                             T 135 I 35
s Graphiurus_murinus.GraMur_scaffold_10447                    3887 40 -     78134 cgatctg-tttc---tcat---agatggtgccttctt-catgtcctca-----
i Graphiurus_murinus.GraMur_scaffold_10447               I 9 C 0
s Hapalemur_alaotrensis.k141_330369                          16222 40 -     40692 gggcctg-ttct---tcat---agttggagacttcta-catgttctca-----
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37621 40 +     49394 gggcctg-ttct---tcat---agttggagacttcta-catgttctca-----
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62492 40 -     66874 gggcctg-ttct---tcat---agttggagacttcta-catgttctca-----
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11363 40 -     42923 gggcctg-ttct---tcat---agttggagacttcta-catgttctca-----
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18365 40 -     53142 gggcctg-ttct---tcat---agttggagacttcta-catgttctca-----
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934044 22 -  22651954 -------------------------tggtacatttta-tgtgttttca-----
i Heterocephalus_glaber.JH602082.1                       I 12 C 0
s Hoolock_leuconedys.ctg274                                    144314 45 -    630532 gggccca-ttcg---tcat---agatggagtcttctg-tatgtcctcatatgg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73289 31 +    143317 --------tttc---tcat---agatggtacctttta-tgtgtcct-------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7414 45 +     12352 aggccca-ttcg---tcat---agatggagtcttctg-tatgtcctcatatgg
i Hylobates_agilis.k141_1155965                          I 69 C 0
s Hylobates_klossii.k141_738755                              14599 45 +     55766 gggccca-ttcg---tcat---agatggagtcttctg-tatgtcctcatatgg
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054129 45 + 191637585 gggccca-ttcg---tcat---agatggagtcttctg-tatgtcctcatatgg
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803007 45 +  11177569 gggccca-ttcg---tcat---agatggagtcttctg-tatgtcctcatatgg
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8637 38 -    135385 aggcct-gtttc---tcat---agatggtacctttta-tgtgtc--ta-----
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388351 40 +   7955117 ggaagta-tttc---ttaa---agacggtgacttctt-tgtatcctca-----
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3910 40 +     11955 gggccta-gtct---tcag---agttggagacttcta-cgagttctca-----
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44751 38 +    110728 gggccca-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14761019 40 +  30322482 ggacctg-ttct---tcat---agctggagacttcta-catgttctca-----
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5651 38 -     13097 gggccag-ttcc---tcat---agatgg--ttttctc-tatgtcctca-----
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5405 38 +      5940 gggccag-ttcc---tcat---agatgg--ttttctc-tatgtcctca-----
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5228 38 -      5717 gggccag-ttcc---tcat---agatgg--ttttctc-tatgtcctca-----
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      380 38 +      8855 gggccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5182 38 -     13645 gggccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10535 40 +     29618 gggcctg-ttct---tcag---agttggagacttcta-tgtgttctca-----
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10531 40 +     31569 gggcctg-ttct---tcag---agttggagacttcta-tgtgttctca-----
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10541 40 +     24756 gggcctg-ttct---tcag---agttggaggcttcta-cgtgttctca-----
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10541 40 +     16388 gggcctg-ttct---tcag---agttggagacttcta-tgtgttctca-----
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               335662 45 -   1826925 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47054 45 -     61512 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374716 45 -  60120075 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                26984 45 +     30207 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1822 45 -      5035 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26937 45 +     30527 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38113 45 -     50087 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47857 45 +     51645 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417060 45 - 187317192 GGGCCCA-TTCG---TCAT---AGATGGAGTCTTCtg-tgtgtcctcatatgg
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401290 45 +  25927173 GGGCCCA-TTCG---TCAT---AGATGGAGTCTTCtg-tgtgtcctcatatgg
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50462 45 -     62418 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 2993 45 +     14901 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46934 45 +     59329 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272842 45 +    668171 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1474 45 -      5049 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4640 45 +     17132 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324130 45 +  24302211 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               358961 45 -    752769 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502564 40 +  40650429 ggaagta-tttc---tcat---agacggtgacttcat-tgtatcctca-----
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_582562                                11775 38 +     17804 gggccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12275 38 -     12984 gggccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20594 38 -     26561 gggccac-ttcc---tcat---agatgg--tcttctc-catgtcctca-----
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986373 40 +  93316391 GGGCCCA-TTCT---TCAT---AGTTGAAGACTTCTa-cgtgttctca-----
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24228 45 -     27822 gggccca-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54148 40 -     62432 gggccca-ttct---tcat---agttggagacttcta-catgttctca-----
i Mirza_zaza.k141_766280                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560                914 40 -    124358 GGACCTG-TTTC---TCAT---AGATGGTGCCTTCTT-CATGTCTTCA-----
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64596 37 +     67721 TAA-ct-gtttc---ttat---agatgataccttcta-t--gtccaca-----
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              31005 45 +     34575 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55245 45 -    132029 gggccca-ttca---tcat---agatggaatcttctg-tatgtcctcatatgg
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11340 45 -     16345 gggccca-ttca---tcat---agatggaatcttctg-tatgtcctcatatgg
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17225 45 +     22201 gggccca-ttca---tcat---agatggaatcttctg-tatgtcctcatatgg
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415446 45 -  22158432 gggccca-ttca---tcat---agatggaatcttctg-tatgtcctcatatgg
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27623 45 -     54323 gggccca-ttca---tcat---agatggaatcttctg-tatgtcctcatatgg
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Octodon_degus.JH651603.1                                11056691 37 -  11899542 aaa-ct-ttttc---ttat---agatggtacctttta-t--atcctca-----
i Octodon_degus.JH651603.1                               C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  640 45 +      1339 gggccca-ttca---tcat---agatggagtcttCTG-TATGTCCTCATATGG
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.KZ622849.1                                 36579 45 -    110857 gggccca-ttca---tcat---agatggagtcttctG-TATGTCCTCATATgg
i Pan_troglodytes.KZ622849.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   245139 45 - 183742232 GGGCCCA-TTCG---TCAT---AGATGGAGTCTTCtg-tgtgtcctcatatgg
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11424 45 +     21308 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294167 45 -  20919399 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24064 45 -     27687 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     743 45 +     10553 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   703 45 -     10386 gggccca-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3404 37 +      9367 gggcc----ttc---taac---agaaggtgtcttcgg-tgtgttgtca-----
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33576 25 -     56120 ----------------------aaatggtacctttta-tatgctttcc-----
i Petromus_typicus.PetTyp_scaffold_17301                 T 52 C 0
s Piliocolobus_badius.k141_2704958                            4387 45 +     55023 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3909 45 -     89929 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4499 45 +     40849 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256229 45 +  14605196 GGTCCTG-TTCG---TCAT---AGATGGAGTCTTCtg-tgtgtcctcatatgg
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66293 38 +    207309 gggccca-ttcc---tcat---agatgt--tcttttc-tgtgtcctca-----
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7381 38 -     25401 gggccca-ttcc---tcat---agatgt--tcttttc-tgtgtcctca-----
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33129 38 +     58159 gggccca-ttcc---tcat---agatgt--tcttttc-tgtgtcctca-----
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33405 38 +     63561 gggccca-ttcc---tcat---agatgt--tcttttc-tgtgtcctca-----
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33165 38 +     51148 gggccca-ttcc---tcat---agatgt--tcttttc-tgtgtcctca-----
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558135 38 -   4542175 gggccca-ttcc---tcat---agatgt--tcttttc-tgtgtcctca-----
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33149 38 +     51125 gggccca-ttcc---tcat---agatgt--tcttttc-tgtgtcctca-----
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9569 35 +     39866 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_bernhardi.k141_2549090                   I 2 C 0
s Plecturocebus_brunneus.k141_862875                          4651 35 -      9282 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_brunneus.k141_862875                     I 2 C 0
s Plecturocebus_caligatus.k141_1382851                       44055 35 -     87950 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_caligatus.k141_1382851                   I 2 C 0
s Plecturocebus_cinerascens.k141_1164729                     44449 35 -     88961 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_cinerascens.k141_1164729                 I 2 C 0
s Plecturocebus_cupreus.k141_2351393                          9147 35 -     39403 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_cupreus.k141_2351393                     I 2 C 0
s Plecturocebus_dubius.k141_1058799                          44098 35 +     87928 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_dubius.k141_1058799                      I 2 C 0
s Plecturocebus_grovesi.k141_2013005                          9146 35 -     60166 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_grovesi.k141_2013005                     I 2 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16083 35 -     67232 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_hoffmannsi.k141_3303950                  I 2 C 0
s Plecturocebus_miltoni.k141_349282                          43999 35 -     90634 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_miltoni.k141_349282                      I 2 C 0
s Plecturocebus_moloch.k141_1031110                          45466 35 +     89403 ---cccg-ttcc---tcat---agacgg--tcttccc-tgtgtcctca-----
i Plecturocebus_moloch.k141_1031110                      I 2 C 0
s Pongo_abelii.CM009266.2                                   180999 45 - 189387572 GAGCCCA-TTCA---TCAT---AGATGGAGTCTTCTg-tgtgtcctcatgtgg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195739 45 -   9816681 gagccca-ttca---tcat---agatggagtcttctg-tgtgtcctcatgtgg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29587 45 +     69807 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46768 45 -     80239 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984167 40 +   4620579 gggcctg-ttCT---TCAT---AGTTGGAGACTTCTA-catgttctca-----
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567662 40 -   2598838 gggcctg-gtCT---TCAG---AGTTGGAGACTTCTA-CATGTTCTCA-----
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5300 40 -      7103 gggcctg-gtct---tcag---agttggagacttcta-catgttctca-----
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5897 40 -     11706 gggcctg-gtct---tcag---agttggagacttcta-catgttctca-----
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9634 40 -     30655 gggcctg-gtct---tcag---agttggagacttcta-catgttctca-----
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35948 40 +     46564 gggcctg-gtct---tcag---agttggagacttcta-catgttctca-----
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96227 40 -     98465 gagcctg-gtat---tcag---agttggagacttcta-catgttctca-----
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9866 40 +     35169 gggcctg-gtat---tcag---agttggagacttcta-catgttctca-----
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28954 45 +     91421 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155506 45 -   7812017 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9811 45 +     72585 ggtcccg-ttcg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3418 45 +      7119 ggtcccg-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124088 45 + 195417433 GGTCCCG-TTCG---TCAT---AGATGGAGTCTTCTg-tgtgtcctcatatgg
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238260 45 -   7961872 ggtcccg-tttg---tcat---agatggagtcttctg-tgtgtcctcatatgg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2012906                                520 38 -      1130 gggccag-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5417 38 +      6077 gggccag-ttcc---tcac---agatgg--tcttctc-tatgtcctca-----
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5511 38 +      5971 gggccac-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5428 38 +      5932 gggccag-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3773 38 -      4390 gggccag-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393530 38 - 209938924 gggccag-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5376 38 +      5979 gggccac-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1946 38 -     22275 gggccag-ttcc---tcat---agatgg--tcttctc-tatgtcctca-----
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110546 38 + 121099817 GGGCCCA-TTCC---TCAT---AGATGA--TCTTCTC-TATGTCTTCA-----
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32113 38 -     47369 gggccca-ttcc---tcat---agatga--tcttctc-tatgtcttca-----
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32499 38 -     79414 gggccca-ttcc---tcat---agatga--tcttctc-tatgtcttca-----
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29190 38 -     34454 gggccca-ttcc---tcat---agatga--tcttctc-tatgtcttca-----
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16591 38 -     22428 gggccca-ttcc---tcat---agatga--tcttctc-tatgtcttca-----
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31745 38 -     47109 gggccca-ttcc---tcat---agatga--tcttctc-tatgtcttca-----
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239780 38 +   5703754 gggccca-ttcc---tcag---agatgg--tcttctc-tatgtcctca-----
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9370 38 +     21866 gggccca-ttcc---tcag---agatgg--tcttctc-tatgtcctca-----
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                           393 45 +     11297 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgttctcatatgg
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30786 45 +     58920 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17284 45 -     45317 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24942 45 -     42441 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27618 45 -     29113 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30695 45 -     48123 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgttctcatatgg
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869929 40 +   3870691 ggaagta-tttc---tcat---agacggtgacttctt-tgtatcctca-----
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392711 45 +   1523678 gggccca-ttca---tcat---agatggaatcttctg-tatgtcctcatatgg
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2220 40 +      9917 gcgcctg-ttcc---tcaa---agatgaaattttcta-cctgtcctca-----
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9018 40 +     20590 gcgcctg-ttcc---tcaa---agatgaaattttcta-cctgtcctca-----
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354948 45 - 186847797 GGGCCCA-TTCG---TCAT---AGATGGAGTCTTCtg-tgtgtcctcatatgg
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25778 40 -     33621 agtcct-gtctt------tcatagatagtacctttta-tatgttttca-----
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22696 45 +     26378 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgccctcatatgg
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35495 45 -     78344 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgccctcatatgg
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22021 45 +     25722 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgccctcatatgg
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30451 45 -     62838 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30440 45 +     46913 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11179 45 -     28527 ggtcccg-ttcg---ccgt---agatggagtcttctc-tgtgccctcatatgg
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32386 45 -     64340 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30424 45 -     63452 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11871 45 +     22490 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5237 45 -      6147 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12150 45 -     13050 ggtcccg-ttcg---ccgt---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257314 45 -   6242583 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgccctcatatgg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3410 45 +     19340 ggtcccg-ttcg---ccat---agatggagtcttctc-tgtgtcctcatatgg
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836643 41 -   4065304 gggccta-atca---tcat---agatggctccttctatcgtgtcctca-----
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10674 41 -     70247 gggccta-gtca---tcat---agatagcaccttctattgggtcctca-----
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  26820 37 -     30710 gggcctg----t---ccat---agttggagacttcta-catgttctca-----
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25727 37 -    147434 gggcctg----t---ccat---agttggagacttcta-catgttctca-----
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175685 40 -    224448 agaaatg-ttta---tcat---agatggtgacttctt-tgtatcttca-----
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156  0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380  0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524  0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699  0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316  3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992  0 +  89631738 C
e Mus_musculus.chr8                                       41689686  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513  0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334  0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274  0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700  0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8725 35 +     36723 cagcagtggactcggtgcctgctgagggcccattc
s Allenopithecus_nigroviridis.k141_3755588                   49743  1 +     53615 c----------------------------------
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1770  1 +     13857 c----------------------------------
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18325  1 -     21945 c----------------------------------
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20010  1 +     32033 c----------------------------------
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Cercocebus_atys.KQ010504.1                                142825  1 -   4669795 c----------------------------------
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46564  1 +     47900 c----------------------------------
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1997  1 -     14410 c----------------------------------
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46381  1 -    148725 c----------------------------------
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28657  1 -     40656 c----------------------------------
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8616  1 +     20796 c----------------------------------
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13730  1 -     17524 c----------------------------------
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29462  1 -     34525 c----------------------------------
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13242  1 -     25376 c----------------------------------
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365829  1 -  39242232 c----------------------------------
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271556  1 +  21565898 c----------------------------------
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33921  1 -     45857 c----------------------------------
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28822  1 -     32606 c----------------------------------
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4985  1 +      8499 c----------------------------------
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27383  1 +     70610 c----------------------------------
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24344  1 +     36323 c----------------------------------
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chlorocebus_aethiops.ctg25                                345245  1 +  18827391 c----------------------------------
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11784  1 -     44032 c----------------------------------
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306630  1 - 135778131 c----------------------------------
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411043  1 -   2368649 c----------------------------------
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380925  1 - 200372422 c----------------------------------
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4482  1 -     84244 c----------------------------------
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                               264772  1 +  21539334 c----------------------------------
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3586045                              19467 35 -     19819 cagcagtaaactcggtgcctgctgagggcccattc
i Gorilla_beringei.k141_3586045                          C 0 I 55
s Gorilla_gorilla.LT578341.1                                257888 35 - 186649187 cagcagtggactcggtgcctgctgagggcccattc
i Gorilla_gorilla.LT578341.1                             I 45 I 53
s Hoolock_leuconedys.ctg274                                    144359 34 -    630532 cagcagtagactcggtgcctgctgagg-cccattc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               7459  2 +     12352 ca---------------------------------
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14644  2 +     55766 ca---------------------------------
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054174  2 + 191637585 ca---------------------------------
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803052  2 +  11177569 ca---------------------------------
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335707  1 -   1826925 c----------------------------------
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47099  1 -     61512 c----------------------------------
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374761  1 -  60120075 c----------------------------------
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27029  1 +     30207 c----------------------------------
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1867  1 -      5035 c----------------------------------
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26982  1 +     30527 c----------------------------------
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38158  1 -     50087 c----------------------------------
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47902  1 +     51645 c----------------------------------
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417105  1 - 187317192 c----------------------------------
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401335  1 +  25927173 c----------------------------------
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50507  1 -     62418 c----------------------------------
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3038  1 +     14901 c----------------------------------
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46979  1 +     59329 c----------------------------------
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272887  1 +    668171 c----------------------------------
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1519  1 -      5049 c----------------------------------
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4685  1 +     17132 c----------------------------------
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324175  1 +  24302211 c----------------------------------
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359006  1 -    752769 c----------------------------------
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24273  1 -     27822 c----------------------------------
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Nasalis_larvatus.k141_1350636                              31050  1 +     34575 c----------------------------------
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55290 35 -    132029 cagcagtagacttgctgcctgctgagggcccattc
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11385 35 -     16345 cagcagtagacttgctgcctgctgagggcccattc
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17270 35 +     22201 cagcagtagacttgctgcctgctgagggcccattc
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415491 35 -  22158432 cagcagtagacttgctgcctgctgagggcccattc
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27668 35 -     54323 cagcagtagacttgctgcctgctgagggcccattc
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  685 35 +      1339 CAGCAGTAGACTCGGTGCCTGCTGAGGGCCCATTC
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.KZ622849.1                                 36624 35 -    110857 CAGCAGTAGACTCGGTGCCTGCTGAGGGCCCATTC
i Pan_troglodytes.KZ622849.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   245184  1 - 183742232 c----------------------------------
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11469  1 +     21308 c----------------------------------
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294212  1 -  20919399 c----------------------------------
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24109  1 -     27687 c----------------------------------
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     788  1 +     10553 c----------------------------------
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   748  1 -     10386 c----------------------------------
i Papio_ursinus.k141_5784434                             C 0 C 0
s Piliocolobus_badius.k141_2704958                            4432  1 +     55023 c----------------------------------
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3954  1 -     89929 c----------------------------------
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4544  1 +     40849 c----------------------------------
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256274  1 +  14605196 c----------------------------------
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                   181044 35 - 189387572 cagcAGTAGACTCGGTGCCTCCTGAGGGCCCATTC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195784 35 -   9816681 cagcagtagactcggtgcctcctgagggcccattc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29632  1 +     69807 c----------------------------------
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46813  1 -     80239 c----------------------------------
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pygathrix_cinerea.k141_1153803                             28999  1 +     91421 c----------------------------------
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155551  1 -   7812017 c----------------------------------
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9856  1 +     72585 c----------------------------------
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3463  1 +      7119 c----------------------------------
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124133  1 + 195417433 c----------------------------------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238305  1 -   7961872 c----------------------------------
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_583282                           438  1 +     11297 c----------------------------------
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30831  1 +     58920 c----------------------------------
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17329  1 -     45317 c----------------------------------
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24987  1 -     42441 c----------------------------------
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27663  1 -     29113 c----------------------------------
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30740  1 -     48123 c----------------------------------
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392756 35 +   1523678 cagcagtagacttgctgcctgctgagggcccattc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                           354993  1 - 186847797 c----------------------------------
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22741  1 +     26378 c----------------------------------
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35540  1 -     78344 c----------------------------------
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22066  1 +     25722 c----------------------------------
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30496  1 -     62838 c----------------------------------
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30485  1 +     46913 c----------------------------------
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11224  1 -     28527 c----------------------------------
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32431  1 -     64340 c----------------------------------
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30469  1 -     63452 c----------------------------------
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11916  1 +     22490 c----------------------------------
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5282  1 -      6147 c----------------------------------
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12195  1 -     13050 c----------------------------------
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257359  1 -   6242583 c----------------------------------
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3455  1 +     19340 c----------------------------------
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
e Fukomys_damarensis.KN121974.1                            2923685  0 -   3816255 C
e Myocastor_coypus.MyoCoy_scaffold_15261                     64633  0 +     67721 C
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Capromys_pilorides.CapPil_scaffold_762519                   1045  0 -      1607 C
e Chinchilla_lanigera.JH722012.1                           1240276  0 -   2543920 C
e Nannospalax_galili.KL204047.1                             948156  0 +   3037898 C
e Saimiri_ustus.k141_360372                                  31783  0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16629  0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29228  0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32537  0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       32151  0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110584  0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            29641  0 +     75252 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              25818  0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     33601  0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_89005        3441  0 +      9367 C
e Octodon_degus.JH651603.1                                11056728  0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73320  0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1934066  0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 10731  0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   7030  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18952100  0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                   100351  0 -    115145 C
e Cuniculus_paca.CunPac_flattened_line_7025                   5857  0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  20118  0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       64453  0 -     66877 C
e Cavia_porcellus.DS562891.1                               5001374  0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4997932  0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Callibella_humilis.k141_1233062                            11715  0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Tupaia_tana.TupTan_flattened_line_394                      10715  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1836684  0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380  0 -      1899 C
e Xerus_inauris.XerIna_scaffold_2302                        175725  0 -    224448 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Varecia_variegata.k141_289850                              25764  0 -    147434 C
e Varecia_rubra.k141_787544                                  26857  0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tarsius_wallacei.k141_226975                                9058  0 +     20590 C
e Tarsius_lariang.k141_1733899                                2260  0 +      9917 C
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1869969  0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524  0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Sapajus_macrocephalus.k141_796559                           9408  0 +     21866 C
e Sapajus_apella.ctg103                                     239818  0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Saguinus_oedipus.k141_1280589                               1984  0 -     22275 C
e Saguinus_mystax.k141_8077960                                5414  0 +      5979 C
e Saguinus_midas.LG03                                       393568  0 - 209938924 C
e Saguinus_labiatus.k141_2380921                              3811  0 -      4390 C
e Saguinus_inustus.k141_2469308                               5466  0 +      5932 C
e Saguinus_imperator.k141_1898058                             5549  0 +      5971 C
e Saguinus_geoffroyi.k141_3779887                             5455  0 +      6077 C
e Saguinus_bicolor.k141_2012906                                558  0 -      1130 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699  0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797  0 +     52041 C
e Propithecus_verreauxi.k141_1047036                          9906  0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       96267  0 -     98465 C
e Propithecus_perrieri.k141_1496898                          35988  0 +     46564 C
e Propithecus_edwardsi.k141_635656                            9674  0 -     30655 C
e Propithecus_diadema.k141_153680                             5937  0 -     11706 C
e Propithecus_coronatus.k141_209299                           5340  0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1567702  0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1984207  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Plecturocebus_moloch.k141_1031110                          45501  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          44034  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      16118  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          9181  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          44133  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          9182  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44484  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       44090  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4686  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9604  0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pithecia_vanzolinii.k141_1369553                           33187  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              558173  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33203  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33443  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               33167  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7419  0 -     25401 C
e Pithecia_albicans.k141_1239476                             66331  0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316  3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_5560                954  0 -    124358 C
e Mus_spretus.CM004101.1                                  39498971  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992  0 +  89631738 C
e Mus_musculus.chr8                                       41689686  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513  0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Mirza_zaza.k141_766280                                     54188  0 -     62432 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334  0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Microcebus_murinus.CM007674.1                           74986413  0 +  93316391 C
e Mico_schneideri.k141_1877700                                     20632  0 -     26561 C
e Mico_humeralifer.k141_1180625                              12313  0 -     12984 C
e Mico_argentatus.k141_582562                                11813  0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274  0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7502604  0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lepilemur_septentrionalis.k141_360456                      10581  0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                         10581  0 +     24756 C
e Lepilemur_dorsalis.k141_387009                             10571  0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                         10575  0 +     29618 C
e Leontopithecus_rosalia.k141_1583055                         5220  0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      418  0 +      8855 C
e Leontocebus_nigricollis.k141_3905062                        5266  0 -      5717 C
e Leontocebus_illigeri.k141_2951200                           5443  0 +      5940 C
e Leontocebus_fuscicollis.k141_2994775                        5689  0 -     13097 C
e Lemur_catta.scaffold_24                                 14761059  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Lagothrix_lagothricha.k141_246028                          44789  0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Indri_indri.k141_2415743                                    3950  0 +     11955 C
e Ictidomys_tridecemlineatus.JH393364.1                     388391  0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       8675  0 -    135385 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Hapalemur_occidentalis.k141_578367                         18405  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                         11403  0 -     42923 C
e Hapalemur_griseus.k141_763500                              62532  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             37661  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          16262  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_10447                    3927  0 -     78134 C
e Glis_glis.GliGli_scaffold_163929                            2858  0 -      6791 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Galeopterus_variegatus.GalVar_scaffold_51812                2717  0 -     28519 C
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eulemur_sanfordi.k141_1122526                              60575  0 -    111500 C
e Eulemur_rufus.k141_514691                                  44172  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            6452  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 49728  0 -     97555 C
e Eulemur_macaco.k141_1562045                                25533  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 54901  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             44577  0 +     68309 C
e Eulemur_coronatus.k141_384460                              88014  0 +    112731 C
e Eulemur_collaris.k141_601111                               44044  0 -     70999 C
e Eulemur_albifrons.k141_51491                               16334  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Daubentonia_madagascariensis.ctg71                        294121  0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    646925  0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Chiropotes_sagulatus.k141_1113111                           9514  0 +     34062 C
e Chiropotes_israelita.k141_313004                           43963  0 -    112038 C
e Chiropotes_albinasus.k141_2628359                            558  0 +      1057 C
e Cheracebus_torquatus.k141_890198                           20892  0 +     39636 C
e Cheracebus_regulus.k141_471822                             21103  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20848  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10435  0 -     32913 C
e Cheirogaleus_medius.k141_759766                             6718  0 -     15404 C
e Cheirogaleus_major.k141_666340                             32215  0 -     33796 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Cephalopachus_bancanus.k141_1689090                         4307  0 -      5494 C
e Cebus_unicolor.k141_1654760                                68594  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9498  0 -     34880 C
e Cebus_albifrons.Contig27                                  372610 1832 -  26074798 I
e Cebuella_pygmaea.k141_145798                               44688  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6630  0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Castor_canadensis.CasCan_scaffold_39952                    29219  0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           272347  0 +    496798 C
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Callithrix_kuhlii.k119_102356                               3231  0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455709  0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3320  0 -      8861 C
e Callimico_goeldii.k141_1609886                             11229  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         22062  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  22149  0 +     95584 C
e Cacajao_calvus.k141_89051                                  44623  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9329  0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Avahi_peyrierasi.k141_1823318                               7816  0 -     19611 C
e Avahi_laniger.k141_2756659                                  7808  0 +     11645 C
e Ateles_paniscus.k141_866194                                24522  0 -     33135 C
e Ateles_marginatus.k141_970259                              50464  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              35095  0 +     44353 C
e Ateles_chamek.k141_615173                                   7539  0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12404  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276238  0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      25497  0 -     32367 C
e Aotus_vociferans.k141_1514463                               3175  0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3616  0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673622  0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3340  0 -     15923 C
e Aotus_azarae.k141_887050                                    2715  0 +     17741 C
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Alouatta_seniculus.k141_928287                             34482  0 +     42133 C
e Alouatta_puruensis.k141_251022                             10348  0 +     30854 C
e Alouatta_palliata.k141_638677                              48175  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42526  0 +     45454 C
e Alouatta_macconnelli.k141_1277969                           1009  0 -      3959 C
e Alouatta_juara.k141_1687208                                43901  0 -     64179 C
e Alouatta_discolor.k141_2561099                             45451  0 +     55831 C
e Alouatta_caraya.k141_1109140                               46012  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73773  0 -     84148 C
e Allactaga_bullata.AllBul_scaffold_20030                    19945  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700  0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8760 55 +     36723 atcatagatggagttttctctatgtcctcatatggcagaagaa----ac-aag-----caa--gctc
s Allenopithecus_nigroviridis.k141_3755588                   49744 21 +     53615 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1771 21 +     13857 ------------------------------------agaagaa----ga-aag-----caaaagctc
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18326 21 -     21945 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20011 21 +     32033 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73773 25 -     84148 ------------------------------tacggcagaagaa----gg-aag-----caa--gctg
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46012 25 -     78289 ------------------------------tacggcagaagaa----gg-aag-----caa--gctg
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45451 25 +     55831 ------------------------------tacggcagaagaa----gg-aag-----caa--gctg
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43901 25 -     64179 ------------------------------tacggcagaagaa----gg-aag-----caa--gctg
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1009 25 -      3959 ------------------------------tacggcagaagaa----gg-aag-----caa--gctg
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42526 25 +     45454 ------------------------------tacggcagaagaa----gg-aag-----caa--gctg
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48175 25 +     70886 ------------------------------tacggcagaagaa----gg-aag-----caa--gctg
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10348 25 +     30854 ------------------------------tacggcagaagaa----gg-aag-----caa--gctg
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34482 25 +     42133 ------------------------------tacggcagaagaa----gg-aag-----caa--gctg
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2715 25 +     17741 ------------------------------tatggcagaagaa----ag-aag-----caa--gctg
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3340 25 -     15923 ------------------------------tatggcagaagaa----ag-aag-----caa--gctg
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673622 25 +   5030052 ------------------------------TAtggcagaagaa----ag-aag-----caa--gctg
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3616 25 -     16391 ------------------------------tatggcagaagaa----ag-aag-----caa--gctg
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3175 25 -     17186 ------------------------------tatggcagaagaa----ag-aag-----caa--gctg
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25497 24 -     32367 ------------------------------taaggtggaagaa----a--aaa-----tta--gctc
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276238 25 +  21539123 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12404 25 +     48076 ------------------------------tatggcaggagag----ag-aag-----caa--gctg
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7539 25 -     28759 ------------------------------taaggcaggagag----ag-aag-----caa--gctg
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35095 25 +     44353 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50464 25 -     71267 ------------------------------taaggcaggagag----ag-aag-----caa--gctg
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24522 25 -     33135 ------------------------------tatggcagaagag----ag-aag-----caa--gctg
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7808 25 +     11645 ------------------------------catggcagaagaa----gg-aaa-----caa--gctc
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7816 25 -     19611 ------------------------------catggcagaagaa----gg-aaa-----caa--gctc
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9329 25 +     28062 ------------------------------tatggcagaagaa----gg-aag-----caa--gctg
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44623 25 -     91139 ------------------------------tatggcagaagaa----gg-aag-----caa--gctg
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22149 25 +     95584 ------------------------------tatggcagaagaa----gg-aag-----caa--gctg
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22062 25 +    119600 ------------------------------tatggcagaagaa----gg-aag-----caa--gctg
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11715 25 +     18648 ------------------------------tatggcagaagag----gg-aag-----cag--gctg
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11229 25 -     13885 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3320 25 -      8861 ------------------------------tatggcaggagag----gg-aag-----caa--gctg
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455709 25 + 189096842 ------------------------------tatggcagaagag----gg-aag-----cag--gctg
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3231 25 +      8664 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1045 25 -      1607 ------------------------------tctggtggaataa----ga-aaa-----tga--gctc
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272347 25 +    496798 ------------------------------catggcagaataa----ga-aaa-----caa--attc
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29219 25 -     39886 ------------------------------catgacagaagaa----ga-aaa-----cca--tctc
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997932 25 +  23392119 ------------------------------tctggcagaaaaa----ga-aaA-----NNN--NNNN
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001374 25 +  23407841 ------------------------------tctggcagaagaa----ga-aaa-----caa--ggtc
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64453 25 -     66877 ------------------------------tctggcagaagaa----ga-aaa-----caa--ggtc
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6630 25 -     12580 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44688 25 +     53515 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374442 25 -  26074798 ------------------------------catggcagaagaa----gg-aat-----caa--gctg
i Cebus_albifrons.Contig27                               I 1832 C 0
s Cebus_olivaceus.k141_1404781                                9498 25 -     34880 ------------------------------catggcagaagaa----gg-aat-----caa--gctg
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68594 25 -     89041 ------------------------------catggcagaagaa----gg-aat-----caa--gctg
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4307 24 -      5494 ------------------------------catggcagaataa----ga-aaa-----caa---ttc
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                142826 21 -   4669795 ------------------------------------agaagaa----GG-AAG-----CGAAAGCTC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46565 21 +     47900 ------------------------------------agaagaa----gg-aag-----cgaaagctc
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           1998 21 -     14410 ------------------------------------agaagaa----gg-aag-----cgaaagctc
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46382 21 -    148725 ------------------------------------agaagaa----gg-aag-----cgaaagctc
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28658 21 -     40656 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8617 21 +     20796 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13731 21 -     17524 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29463 21 -     34525 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13243 21 -     25376 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365830 21 -  39242232 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271557 21 +  21565898 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33922 21 -     45857 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28823 21 -     32606 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         4986 21 +      8499 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27384 21 +     70610 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24345 21 +     36323 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32215 25 -     33796 ------------------------------catggcagaagaa----gg-aaa-----caa--gctc
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6718 25 -     15404 ------------------------------catggcagaagaa----gg-aaa-----caa--gctc
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10435 25 -     32913 ------------------------------tacggcaggagaa----gg-aag-----caa--gctg
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20848 25 -     40346 ------------------------------tacggcagaagaa----gg-aag-----caa--gctg
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21103 25 +    216457 ------------------------------tacggcagaagaa----gg-aag-----caa--gctg
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20892 25 +     39636 ------------------------------tacggcagaagaa----gg-aag-----caa--gctg
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240276 23 -   2543920 ------------------------------tcttgtggaagaa----g---aa-----caa--gctt
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            558 23 +      1057 ------------------------------tatggcagaagag----gg-aag-----caa--gc--
i Chiropotes_albinasus.k141_2628359                      C 0 I 5
s Chiropotes_israelita.k141_313004                           43963 23 -    112038 ------------------------------tatggcagaagaa----gg-aag-----caa--gc--
i Chiropotes_israelita.k141_313004                       C 0 I 5
s Chiropotes_sagulatus.k141_1113111                           9514 23 +     34062 ------------------------------tatggcagaagaa----gg-aag-----caa--gc--
i Chiropotes_sagulatus.k141_1113111                      C 0 I 5
s Chlorocebus_aethiops.ctg25                                345246 21 +  18827391 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11785 21 -     44032 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306631 21 - 135778131 ------------------------------------agaagaa----gg-AAG-----CAAAAGCTC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411044 21 -   2368649 ------------------------------------agaagaa----GG-AAG-----CAAAAGCTC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380926 21 - 200372422 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4483 21 -     84244 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646925 25 -   1526836 ------------------------------tgaattagaaaaa----gt-agg-----aga--gtac
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20118 25 +     50838 ------------------------------tctagtggaagaa----ga-aaa-----caa--actc
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   5857 25 +     36344 ------------------------------tctggtagaagaa----ga-aaa-----caa--ggtc
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 2773
s Dasyprocta_punctata.DasPun_flattened_line_15900            29641 25 +     75252 ------------------------------tctcgtggaagaa----ga-aaa-----caa--gggc
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294121 25 +  12879189 ------------------------------catggcaaaagaa----gg-aaa-----caa--gctc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100351 22 -    115145 ------------------------------tcttgtgg---aa----ga-aaa-----caa--gatc
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952100 34 -  37912305 ------------------------------catggaagaagaaaagaga-agaaggaaata--cttc
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   7030 34 -     10735 ------------------------------catggaagaagaaaagaga-agaaggaaata--cttc
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10731 25 +     14636 ------------------------------tctggtggaagaa----ga-aaa-----caa--ggtc
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Erythrocebus_patas.Contig38                               264773 21 +  21539334 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16334 25 -     24895 ------------------------------cctggcagaagaa----ga-aaa-----caa--gctc
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               44044 25 -     70999 ------------------------------cctggcagaagaa----ga-aaa-----caa--gctc
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              88014 25 +    112731 ------------------------------catggcagaagaa----ga-aaa-----caa--gctc
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44577 25 +     68309 ------------------------------catggcagaagaa----ga-aaa-----caa--gctc
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54901 25 -     65740 ------------------------------cctggcagaagaa----ga-aaa-----caa--gctc
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25533 25 -     75513 ------------------------------catggcagaagaa----ga-aaa-----caa--gctc
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49728 25 -     97555 ------------------------------cctggcagaagaa----ga-aaa-----caa--gctc
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6452 25 +     30972 ------------------------------cttgtcagaagaa----ga-aaa-----caa--gctc
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44172 25 -     52037 ------------------------------cctggcagaagaa----ga-aaa-----caa--gctc
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60575 25 -    111500 ------------------------------cctggcagaagaa----ga-aaa-----caa--ggtc
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923685 25 -   3816255 ------------------------------tctggtggaagaa----ga-aaa-----caa--gctg
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2717 25 -     28519 ------------------------------catggtggaagaa----gg-aag-----caa--gctc
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2858 25 -      6791 ------------------------------cacagtgcaagaa----ga-aaa-----taa--gctc
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_420802                                1044 55 -      1361 atcatagatggagttttctctatgtcctcatatggcagaagaa----gg-aag-----caa--gctc
i Gorilla_beringei.k141_420802                           I 80 I 112
s Gorilla_gorilla.LT578336.1                                 74419 55 +  33314783 atcatagatggagttttctctatgtcctcatatggcagaagaa----ag-aag-----caa--gctc
i Gorilla_gorilla.LT578336.1                             I 35 I 14
s Graphiurus_murinus.GraMur_scaffold_10447                    3927 25 -     78134 ------------------------------cgcagtggaagaa----ga-aaa-----taa--gctc
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16262 25 -     40692 ------------------------------catgggagaagga----ga-aaa-----caa--gctc
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37661 25 +     49394 ------------------------------catgggagaagga----ga-aaa-----caa--gctc
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62532 25 -     66874 ------------------------------catggcagaagga----ga-aaa-----caa--gctc
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11403 25 -     42923 ------------------------------catggcagaagga----ga-aaa-----caa--gctc
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18405 25 -     53142 ------------------------------catggcagaagga----ga-aaa-----caa--gctc
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934066 25 -  22651954 ------------------------------tctgttggaagaa----ga-aac-----caa--gctc
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    144393 55 -    630532 atcatagatggagtcttctgtatgtcctcatatggcagaagaa----gg-aag-----caa--gctc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73320 24 +    143317 -------------------------------ctggcagaagaa----ga-aaa-----caa--ggtc
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7461 18 +     12352 -------------------------------------gaagaa----gg-aag-----caa--gctc
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14646 18 +     55766 -------------------------------------gaagaa----gg-aag-----caa--gctc
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054176 18 + 191637585 -------------------------------------gaagaa----gg-aag-----caa--gctc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803054 18 +  11177569 -------------------------------------gaagaa----gg-aag-----caa--gctc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8675 25 -    135385 ------------------------------tctggtggaggaa----ga-aaa-----caa--gctc
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388391 26 +   7955117 ------------------------------catgatagaagaa----acacaa-----caa--gctc
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3950 25 +     11955 ------------------------------catggcagaagaa----gg-aaa-----caa--gctc
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44789 25 +    110728 ------------------------------tatggcagaagaa----gg-aag-----caa--gttg
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14761059 25 +  30322482 ------------------------------catggcagaagga----ga-aaa-----caa--gctc
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5689 25 -     13097 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5443 25 +      5940 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5266 25 -      5717 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      418 25 +      8855 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5220 25 -     13645 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10575 25 +     29618 ------------------------------catggcagaagaa----gg-aaa-----caa--gctc
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10571 25 +     31569 ------------------------------catggcagaagaa----gg-aaa-----caa--gctc
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10581 25 +     24756 ------------------------------cgtggcagaagaa----gg-aaa-----caa--gctc
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10581 25 +     16388 ------------------------------catggcagaagaa----gg-aaa-----caa--gctc
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               335708 21 -   1826925 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47100 21 -     61512 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374762 21 -  60120075 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27030 21 +     30207 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1868 21 -      5035 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 26983 21 +     30527 ------------------------------------agaagga----gg-aag-----caaaagctc
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38159 21 -     50087 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47903 21 +     51645 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417106 21 - 187317192 ------------------------------------agaagaA----GG-AAG-----CAAAAGCTC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401336 21 +  25927173 ------------------------------------agaagaa----GG-AAG-----CAAAAGCTC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50508 21 -     62418 ------------------------------------agaagag----gg-aag-----caaaagctc
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3039 21 +     14901 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 46980 21 +     59329 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272888 21 +    668171 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1520 21 -      5049 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4686 21 +     17132 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324176 21 +  24302211 ------------------------------------agaaaaa----gg-aag-----cgaaagctc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359007 21 -    752769 ------------------------------------agaaaaa----gg-aag-----cgaaagctc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502604 26 +  40650429 ------------------------------catggtagaagaa----acacaa-----taa--actc
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_582562                                11813 25 +     17804 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12313 25 -     12984 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20632 25 -     26561 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986413 25 +  93316391 ------------------------------catggcagaagaa----gG-AAA-----CAA--GCTC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24274 21 -     27822 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54188 25 -     62432 ------------------------------catggcagaagaa----gg-aaa-----caa--gctc
i Mirza_zaza.k141_766280                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560                954 22 -    124358 ------------------------------TACAGTG---GAA----CA-AAA-----TAA--GCTC
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64633 25 +     67721 ------------------------------tctggtagaataa----gg-aaa-----caa--gctc
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              31051 21 +     34575 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55325 55 -    132029 gtcatagatggagtcttccgtatgtcctcatatggcagaagaa----gg-aag-----caa--gctc
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11420 55 -     16345 gtcatagatggagtcttccgtatgtcctcatatggcagaagaa----gg-aag-----caa--gctc
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17305 55 +     22201 gtcatagatggagtcttccgtatgtcctcatatggcagaagaa----gg-aag-----caa--gctc
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415526 55 -  22158432 gtcatagatggagtcttccgtatgtcctcatatggcagaagaa----gg-aag-----caa--gctc
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27703 55 -     54323 gtcatagatggagtcttccgtatgtcctcatatggcagaagaa----gg-aag-----caa--gctc
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Octodon_degus.JH651603.1                                11056728 25 -  11899542 ------------------------------tctagtggaagaa----ga-aaa-----caa--attc
i Octodon_degus.JH651603.1                               C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  720 55 +      1339 ATCATAGATGGAGTTTTCTCtatgtcctcatatggcagaagaa----ag-aag-----caa--GCTC
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.KZ622849.1                                 36659 55 -    110857 ATCATAGATGGAGTTTTCTCtatgtcctcatatggcagaagaa----ag-aag-----caa--GCTC
i Pan_troglodytes.KZ622849.1                             C 0 C 0
s Papio_anubis.CM001495.2                                   245185 21 - 183742232 ------------------------------------agaagaa----GG-AAG-----CAAAAGCTC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11470 21 +     21308 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294213 21 -  20919399 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24110 21 -     27687 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     789 21 +     10553 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   749 21 -     10386 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3441 29 +      9367 ------------------------------tatgggagaagaaaagaga-aga-----ata--gttc
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33601 25 -     56120 ------------------------------tctggtgaaagaa----ga-aaa-----caa--gctg
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                            4433 21 +     55023 ------------------------------------agaagaa----gg-agg-----caaaagctc
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3955 21 -     89929 ------------------------------------agaagaa----gg-agg-----caaaagctc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4545 21 +     40849 ------------------------------------agaagaa----gg-agg-----caaaagctc
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256275 21 +  14605196 ------------------------------------agaagaA----GG-AGG-----CAAAAGCTC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66331 25 +    207309 ------------------------------tgtggcagaagaa----gg-aag-----caa--gctg
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7419 25 -     25401 ------------------------------tgtggcagaagaa----gg-aag-----caa--gctg
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33167 25 +     58159 ------------------------------tgtggcagaagaa----gg-aag-----caa--gctg
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33443 25 +     63561 ------------------------------tgtggcagaagaa----gg-aag-----caa--gctg
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33203 25 +     51148 ------------------------------tgtggcagaagaa----gg-aag-----caa--gctg
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558173 25 -   4542175 ------------------------------tgtggcagaagaa----gg-aag-----caa--gctg
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33187 25 +     51125 ------------------------------tgtggcagaagag----gg-aag-----caa--gctg
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9604 25 +     39866 ------------------------------tacggccgaagaa----gg-aag-----cag--gctg
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4686 25 -      9282 ------------------------------tacggccgaagaa----gg-aag-----cag--gctg
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44090 25 -     87950 ------------------------------tacggccgaagaa----gg-aag-----cag--gctg
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44484 25 -     88961 ------------------------------tacggccgaagaa----gg-aag-----cag--gctg
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9182 25 -     39403 ------------------------------tacggccgaagaa----gg-aag-----cag--gctg
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44133 25 +     87928 ------------------------------tacggccgaagaa----gg-aag-----cag--gctg
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9181 25 -     60166 ------------------------------tacggccgaagaa----gg-aag-----cag--gctg
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16118 25 -     67232 ------------------------------tacggccgaagaa----gg-aag-----cag--gctg
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44034 25 -     90634 ------------------------------tacggccgaagaa----gg-aag-----cag--gctg
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45501 25 +     89403 ------------------------------tacggccgaagaa----gg-aag-----cag--gctg
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181079 55 - 189387572 ATCATAGATGGAGTTTTCTCtatgtcctcatatggcagaagaA----GG-AAG-----TAA--GCTC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195819 55 -   9816681 atcatagatggagttttctctatgtcctcatatggcagaagaa----gg-aag-----taa--gctc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29633 21 +     69807 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46814 21 -     80239 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984207 25 +   4620579 ------------------------------catggcagaagga----ga-aaA-----CAA--GCTC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567702 25 -   2598838 ------------------------------CAtggcaaaagaa----gg-aaa-----caa--gctc
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5340 25 -      7103 ------------------------------catggcaaaagaa----gg-aaa-----caa--gctc
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5937 25 -     11706 ------------------------------catggcaaaagaa----gg-aaa-----caa--gctc
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9674 25 -     30655 ------------------------------catggcaaaagaa----gg-aaa-----caa--gctc
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          35988 25 +     46564 ------------------------------catggcaaaagaa----gg-aaa-----caa--gctc
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96267 25 -     98465 ------------------------------catggcaaaagaa----gg-aaa-----caa--gctc
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9906 25 +     35169 ------------------------------catggcaaaagaa----gg-aaa-----caa--gctc
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29000 21 +     91421 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155552 21 -   7812017 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9857 21 +     72585 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3464 21 +      7119 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124134 21 + 195417433 ------------------------------------agaagaA----GG-AAG-----CAAAAGCTC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238306 21 -   7961872 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2012906                                558 25 -      1130 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5455 25 +      6077 ------------------------------tacggcagaagag----gg-aag-----caa--gctg
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5549 25 +      5971 ------------------------------tacggcagaagag----gg-aag-----caa--gctg
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5466 25 +      5932 ------------------------------tacggcagaagag----gg-aag-----caa--gctg
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3811 25 -      4390 ------------------------------tacggcagaagag----gg-aag-----caa--gctg
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393568 25 - 209938924 ------------------------------tatggcagaagag----gg-aag-----caa--gctg
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5414 25 +      5979 ------------------------------tacggcagaagag----gg-aag-----caa--gctg
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               1984 25 -     22275 ------------------------------tacggcagaagag----gg-aag-----caa--gctg
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110584 25 + 121099817 ------------------------------TATGGCAGAAGAA----GG-AAG-----CAA--GCTG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32151 25 -     47369 ------------------------------tatggcagaagaa----gg-aag-----caa--gctg
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32537 25 -     79414 ------------------------------tatggcagaagaa----gg-aag-----caa--gctg
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29228 25 -     34454 ------------------------------tatggcagaagaa----gg-aag-----caa--gctg
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16629 25 -     22428 ------------------------------tatggcagaagaa----gg-aag-----caa--gctg
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31783 25 -     47109 ------------------------------tatggcagaagaa----gg-aag-----caa--gctg
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239818 25 +   5703754 ------------------------------catggcagaagaa----gg-aat-----caa--gctg
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9408 25 +     21866 ------------------------------catggcagaagaa----gg-aat-----caa--gctg
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                           439 21 +     11297 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30832 21 +     58920 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17330 21 -     45317 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            24988 21 -     42441 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27664 21 -     29113 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30741 21 -     48123 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869969 26 +   3870691 ------------------------------catagtagaaaaa----acacaa-----caa--gctc
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392791 55 +   1523678 gtcatagatggagtcttctgtatgtcctcatatggcagaagaa----gg-aag-----caa--gctc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2260 25 +      9917 ------------------------------catggcaggagaa----ga-aaa-----caa--gttc
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9058 25 +     20590 ------------------------------cacggcagaagaa----ga-aaa-----caa--gttc
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           354994 21 - 186847797 ------------------------------------agaagaa----GG-AAG-----CAAAAGCTC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25818 25 -     33621 ------------------------------attggtgaaagaa----ga-aaa-----caa--acta
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22742 21 +     26378 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35541 21 -     78344 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22067 21 +     25722 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30497 21 -     62838 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30486 21 +     46913 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11225 21 -     28527 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32432 21 -     64340 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30470 21 -     63452 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11917 21 +     22490 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5283 21 -      6147 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12196 21 -     13050 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257360 21 -   6242583 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3456 21 +     19340 ------------------------------------agaagaa----gg-aag-----caaaagctc
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836684 25 -   4065304 ------------------------------cacggtggaagaa----ga-aaa-----gaa--gctt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      10715 25 -     70247 ------------------------------cacggtggaagaa----ga-aaa-----gaa--gctt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  26857 25 -     30710 ------------------------------catggcagaaaga----ga-aaa-----caa--gctc
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25764 25 -    147434 ------------------------------catggcagaaaga----ga-aaa-----caa--gctc
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175725 26 -    224448 ------------------------------catggtagaagaa----aaaaaa-----caa--gata
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156  0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380  0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524  0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699  0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316  3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992  0 +  89631738 C
e Mus_musculus.chr8                                       41689686  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513  0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334  0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274  0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700  0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8815 2 +     36723 tc
s Allenopithecus_nigroviridis.k141_3755588                   49765 2 +     53615 cc
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1792 2 +     13857 cc
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18347 2 -     21945 cc
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20032 2 +     32033 cc
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73798 2 -     84148 tc
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46037 2 -     78289 tc
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45476 2 +     55831 tc
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43926 2 -     64179 tc
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1034 2 -      3959 tc
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42551 2 +     45454 tc
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48200 2 +     70886 tc
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10373 2 +     30854 tc
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34507 2 +     42133 tc
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2740 2 +     17741 tc
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3365 2 -     15923 tc
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673647 2 +   5030052 tc
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3641 2 -     16391 tc
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3200 2 -     17186 tc
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25521 2 -     32367 tc
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 5
s Ateles_geoffroyi_b.tarseq_1536                               276263 2 +  21539123 tc
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12429 2 +     48076 tc
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7564 2 -     28759 tc
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35120 2 +     44353 tc
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50489 2 -     71267 tc
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24547 2 -     33135 tc
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7833 2 +     11645 tc
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7841 2 -     19611 tc
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9354 2 +     28062 tc
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44648 2 -     91139 tc
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22174 2 +     95584 tc
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22087 2 +    119600 tc
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11740 2 +     18648 tc
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11254 2 -     13885 tc
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3345 2 -      8861 tc
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455734 2 + 189096842 tc
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3256 2 +      8664 tc
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1070 2 -      1607 tc
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272372 2 +    496798 tc
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29244 2 -     39886 tc
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997957 2 +  23392119 NN
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001399 2 +  23407841 tc
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64478 2 -     66877 tc
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6655 2 -     12580 tc
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44713 2 +     53515 tc
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374467 2 -  26074798 tc
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9523 2 -     34880 tc
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68619 2 -     89041 tc
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4331 2 -      5494 tt
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                142847 2 -   4669795 TC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46586 2 +     47900 tc
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2019 2 -     14410 tc
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46403 2 -    148725 tc
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28679 2 -     40656 tc
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8638 2 +     20796 tc
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13752 2 -     17524 tc
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29484 2 -     34525 tc
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13264 2 -     25376 tc
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365851 2 -  39242232 tc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271578 2 +  21565898 tc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33943 2 -     45857 tc
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28844 2 -     32606 tc
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5007 2 +      8499 tc
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27405 2 +     70610 tc
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24366 2 +     36323 tc
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32240 2 -     33796 tc
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6743 2 -     15404 tc
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10460 2 -     32913 tc
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20873 2 -     40346 tc
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21128 2 +    216457 tc
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20917 2 +     39636 tc
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240299 2 -   2543920 tc
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1091259                          32883 2 -     52013 at
i Chiropotes_albinasus.k141_1091259                      T 2 I 20
s Chiropotes_israelita.k141_939154                           68961 2 +    248106 AT
i Chiropotes_israelita.k141_939154                       T 2 n 5
s Chiropotes_sagulatus.k141_1049826                          20758 2 -     40411 AT
i Chiropotes_sagulatus.k141_1049826                      T 2 n 5
s Chlorocebus_aethiops.ctg25                                345267 2 +  18827391 cc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11806 2 -     44032 cc
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306652 2 - 135778131 CC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411065 2 -   2368649 TC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380947 2 - 200372422 tc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4504 2 -     84244 tc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646950 2 -   1526836 tt
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20143 2 +     50838 tc
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   8655 2 +     36344 tc
i Cuniculus_paca.CunPac_flattened_line_7025              I 2773 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29666 2 +     75252 tc
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294146 2 +  12879189 tc
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100373 2 -    115145 tc
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952134 2 -  37912305 tc
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   7064 2 -     10735 tc
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10756 2 +     14636 tc
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Erythrocebus_patas.Contig38                               264794 2 +  21539334 cc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16359 2 -     24895 tc
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               44069 2 -     70999 tc
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              88039 2 +    112731 tc
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44602 2 +     68309 tc
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54926 2 -     65740 tc
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25558 2 -     75513 tc
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49753 2 -     97555 tc
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6477 2 +     30972 tc
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44197 2 -     52037 tc
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60600 2 -    111500 tc
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923710 2 -   3816255 tc
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2742 2 -     28519 cc
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2883 2 -      6791 tc
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3586045                              19557 2 -     19819 tc
i Gorilla_beringei.k141_3586045                          I 55 C 0
s Gorilla_gorilla.LT578341.1                                257976 2 - 186649187 tc
i Gorilla_gorilla.LT578341.1                             I 53 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3952 2 -     78134 cc
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16287 2 -     40692 tc
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37686 2 +     49394 tc
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62557 2 -     66874 tc
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11428 2 -     42923 tc
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18430 2 -     53142 tc
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934091 2 -  22651954 tc
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    144448 2 -    630532 tc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73344 2 +    143317 tc
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7479 2 +     12352 tc
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14664 2 +     55766 tc
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054194 2 + 191637585 tc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803072 2 +  11177569 tc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8700 2 -    135385 tc
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388417 2 +   7955117 ca
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3975 2 +     11955 tc
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44814 2 +    110728 tc
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14761084 2 +  30322482 tc
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_2994775                        5714 2 -     13097 tc
i Leontocebus_fuscicollis.k141_2994775                   C 0 C 0
s Leontocebus_illigeri.k141_2951200                           5468 2 +      5940 tc
i Leontocebus_illigeri.k141_2951200                      C 0 C 0
s Leontocebus_nigricollis.k141_3905062                        5291 2 -      5717 tc
i Leontocebus_nigricollis.k141_3905062                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      443 2 +      8855 tc
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5245 2 -     13645 tc
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10600 2 +     29618 tc
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10596 2 +     31569 tc
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10606 2 +     24756 tc
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10606 2 +     16388 tc
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               335729 2 -   1826925 tc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47121 2 -     61512 tc
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374783 2 -  60120075 tc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27051 2 +     30207 tc
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1889 2 -      5035 tc
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27004 2 +     30527 tc
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38180 2 -     50087 tc
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47924 2 +     51645 tc
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417127 2 - 187317192 TC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401357 2 +  25927173 TC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50529 2 -     62418 tc
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3060 2 +     14901 tc
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47001 2 +     59329 tc
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272909 2 +    668171 tc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1541 2 -      5049 tc
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4707 2 +     17132 tc
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324197 2 +  24302211 tc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359028 2 -    752769 tc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502630 2 +  40650429 tc
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_582562                                11838 2 +     17804 tc
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12338 2 -     12984 tc
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20657 2 -     26561 tc
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986438 2 +  93316391 TC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24295 2 -     27822 tc
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54213 2 -     62432 tc
i Mirza_zaza.k141_766280                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560                976 2 -    124358 CC
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64658 2 +     67721 tc
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              31072 2 +     34575 tc
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55380 2 -    132029 tc
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11475 2 -     16345 tc
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17360 2 +     22201 tc
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415581 2 -  22158432 tc
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27758 2 -     54323 tc
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Octodon_degus.JH651603.1                                11056753 2 -  11899542 cc
i Octodon_degus.JH651603.1                               C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  775 2 +      1339 TC
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.KZ622849.1                                 36714 2 -    110857 TC
i Pan_troglodytes.KZ622849.1                             C 0 I 49
s Papio_anubis.CM001495.2                                   245206 2 - 183742232 TC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11491 2 +     21308 tc
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294234 2 -  20919399 tc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24131 2 -     27687 tc
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     810 2 +     10553 tc
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   770 2 -     10386 tc
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3470 2 +      9367 cc
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33626 2 -     56120 tc
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                            4454 2 +     55023 cc
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3976 2 -     89929 tc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4566 2 +     40849 tc
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256296 2 +  14605196 TC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66356 2 +    207309 tc
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7444 2 -     25401 tc
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33192 2 +     58159 tc
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33468 2 +     63561 tc
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33228 2 +     51148 tc
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558198 2 -   4542175 tc
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33212 2 +     51125 tc
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9629 2 +     39866 tc
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4711 2 -      9282 tc
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44115 2 -     87950 tc
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44509 2 -     88961 tc
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9207 2 -     39403 tc
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44158 2 +     87928 tc
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9206 2 -     60166 tc
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16143 2 -     67232 tc
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44059 2 -     90634 tc
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45526 2 +     89403 tc
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181134 2 - 189387572 TC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195874 2 -   9816681 tc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29654 2 +     69807 tc
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46835 2 -     80239 tc
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984232 2 +   4620579 TC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567727 2 -   2598838 cc
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5365 2 -      7103 cc
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             5962 2 -     11706 cc
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9699 2 -     30655 cc
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          36013 2 +     46564 cc
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96292 2 -     98465 cc
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9931 2 +     35169 cc
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29021 2 +     91421 tc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155573 2 -   7812017 tc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9878 2 +     72585 tc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3485 2 +      7119 tc
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124155 2 + 195417433 TC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238327 2 -   7961872 tc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2012906                                583 2 -      1130 tc
i Saguinus_bicolor.k141_2012906                          C 0 C 0
s Saguinus_geoffroyi.k141_3779887                             5480 2 +      6077 tc
i Saguinus_geoffroyi.k141_3779887                        C 0 C 0
s Saguinus_imperator.k141_1898058                             5574 2 +      5971 tc
i Saguinus_imperator.k141_1898058                        C 0 C 0
s Saguinus_inustus.k141_2469308                               5491 2 +      5932 tc
i Saguinus_inustus.k141_2469308                          C 0 C 0
s Saguinus_labiatus.k141_2380921                              3836 2 -      4390 tc
i Saguinus_labiatus.k141_2380921                         C 0 C 0
s Saguinus_midas.LG03                                       393593 2 - 209938924 tc
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_8077960                                5439 2 +      5979 tc
i Saguinus_mystax.k141_8077960                           C 0 C 0
s Saguinus_oedipus.k141_1280589                               2009 2 -     22275 tc
i Saguinus_oedipus.k141_1280589                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110609 2 + 121099817 TC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32176 2 -     47369 tc
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32562 2 -     79414 tc
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29253 2 -     34454 tc
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16654 2 -     22428 tc
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31808 2 -     47109 tc
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239843 2 +   5703754 tc
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9433 2 +     21866 tc
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                           460 2 +     11297 tc
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30853 2 +     58920 tc
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17351 2 -     45317 tc
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25009 2 -     42441 tc
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27685 2 -     29113 tc
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30762 2 -     48123 tc
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869995 2 +   3870691 ct
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392846 2 +   1523678 tc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2285 2 +      9917 tc
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9083 2 +     20590 tc
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355015 2 - 186847797 TC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25843 2 -     33621 tc
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22763 2 +     26378 tc
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35562 2 -     78344 tc
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22088 2 +     25722 tc
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30518 2 -     62838 tc
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30507 2 +     46913 tc
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11246 2 -     28527 tc
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32453 2 -     64340 tc
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30491 2 -     63452 tc
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11938 2 +     22490 tc
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5304 2 -      6147 tc
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12217 2 -     13050 tc
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257381 2 -   6242583 tc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3477 2 +     19340 tc
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836709 2 -   4065304 tc
i Tupaia_chinensis.KB320699.1                            C 0 I 272
s Tupaia_tana.TupTan_flattened_line_394                      10740 2 -     70247 tc
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 272
s Varecia_rubra.k141_787544                                  26882 2 -     30710 tc
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25789 2 -    147434 tc
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175751 2 -    224448 tc
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156 0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380 0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524 0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699 0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797 0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738 0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532 0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953 0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316 3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971 0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992 0 +  89631738 C
e Mus_musculus.chr8                                       41689686 0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513 0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334 0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274 0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506 0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850 0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914 0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042 0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275 0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536 2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945 0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700 0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8817 12 +     36723 tc--aga--ca---------tt---------t-t------------------t
s Allenopithecus_nigroviridis.k141_3755588                   49767 12 +     53615 tc--agg--cc---------tt---------t-t------------------t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1794 12 +     13857 tc--agg--cc---------tt---------t-t------------------t
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18349 12 -     21945 tc--agg--cc---------tt---------t-t------------------t
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20034 12 +     32033 tc--agg--cc---------tt---------t-t------------------t
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73800 12 -     84148 cc--agg--ct---------tt---------t-t------------------t
i Alouatta_belzebul.k141_1011583                         C 0 I 1
s Alouatta_caraya.k141_1109140                               46039 12 -     78289 cc--agg--cc---------tt---------t-t------------------g
i Alouatta_caraya.k141_1109140                           C 0 I 1
s Alouatta_discolor.k141_2561099                             45478 12 +     55831 cc--agg--cc---------tt---------t-t------------------t
i Alouatta_discolor.k141_2561099                         C 0 I 1
s Alouatta_juara.k141_1687208                                43928 12 -     64179 cc--agg--cc---------tt---------t-t------------------g
i Alouatta_juara.k141_1687208                            C 0 I 1
s Alouatta_macconnelli.k141_1277969                           1036 12 -      3959 cc--agg--cc---------tt---------t-t------------------g
i Alouatta_macconnelli.k141_1277969                      C 0 I 1
s Alouatta_nigerrima.k141_376068                             42553 12 +     45454 cc--agg--cc---------tt---------t-t------------------t
i Alouatta_nigerrima.k141_376068                         C 0 I 1
s Alouatta_palliata.k141_638677                              48202 12 +     70886 cc--agg--cc---------tt---------t-t------------------t
i Alouatta_palliata.k141_638677                          C 0 I 1
s Alouatta_puruensis.k141_251022                             10375 12 +     30854 cc--agg--cc---------tt---------t-t------------------t
i Alouatta_puruensis.k141_251022                         C 0 I 1
s Alouatta_seniculus.k141_928287                             34509 12 +     42133 cc--agg--cc---------tt---------t-t------------------t
i Alouatta_seniculus.k141_928287                         C 0 I 1
s Aotus_azarae.k141_887050                                    2742 12 +     17741 cc--ggg--cc---------tt---------g-t------------------t
i Aotus_azarae.k141_887050                               C 0 I 1
s Aotus_griseimembra.k141_3192254                             3367 12 -     15923 cc--ggg--cc---------tt---------g-t------------------t
i Aotus_griseimembra.k141_3192254                        C 0 I 1
s Aotus_nancymaae.KZ198451.1                                673649 12 +   5030052 cc--ggg--cc---------tt---------g-t------------------t
i Aotus_nancymaae.KZ198451.1                             C 0 I 1
s Aotus_trivirgatus.k141_318729                               3643 12 -     16391 cc--ggg--cc---------tt---------g-t------------------t
i Aotus_trivirgatus.k141_318729                          C 0 I 1
s Aotus_vociferans.k141_1514463                               3202 12 -     17186 cc--ggg--cc---------tt---------g-t------------------t
i Aotus_vociferans.k141_1514463                          C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_46868                      25528  8 -     32367 --------------------tt---------t-tt---------------aaa
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 5 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276265 12 +  21539123 cc--agg--cc---------tt---------t-t------------------t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 1
s Ateles_belzebuth.k141_1572163                              12431 12 +     48076 cc--agg--cc---------tt---------t-t------------------t
i Ateles_belzebuth.k141_1572163                          C 0 I 1
s Ateles_chamek.k141_615173                                   7566 12 -     28759 cc--agg--cc---------tt---------t-t------------------t
i Ateles_chamek.k141_615173                              C 0 I 1
s Ateles_geoffroyi_a.k141_1283730                              35122 12 +     44353 cc--agg--cc---------tt---------t-t------------------t
i Ateles_geoffroyi_a.k141_1283730                          C 0 I 1
s Ateles_marginatus.k141_970259                              50491 12 -     71267 cc--agg--cc---------tt---------t-t------------------t
i Ateles_marginatus.k141_970259                          C 0 I 1
s Ateles_paniscus.k141_866194                                24549 12 -     33135 cc--agg--cc---------tt---------t-t------------------t
i Ateles_paniscus.k141_866194                            C 0 I 1
s Avahi_laniger.k141_2756659                                  7835 12 +     11645 tc--agg--cc---------tt---------t-t------------------t
i Avahi_laniger.k141_2756659                             C 0 I 1
s Avahi_peyrierasi.k141_1823318                               7843 12 -     19611 tc--agg--cc---------tt---------t-t------------------t
i Avahi_peyrierasi.k141_1823318                          C 0 I 1
s Cacajao_ayresi.k141_96119                                   9356 12 +     28062 cc--agg--cc---------tt---------t-t------------------t
i Cacajao_ayresi.k141_96119                              C 0 I 1
s Cacajao_calvus.k141_89051                                  44650 12 -     91139 cc--agg--cc---------tt---------t-t------------------t
i Cacajao_calvus.k141_89051                              C 0 I 1
s Cacajao_hosomi.k141_81245                                  22176 12 +     95584 cc--agg--cc---------tt---------t-t------------------t
i Cacajao_hosomi.k141_81245                              C 0 I 1
s Cacajao_melanocephalus.k141_619699                         22089 12 +    119600 cc--agg--cc---------tt---------t-t------------------t
i Cacajao_melanocephalus.k141_619699                     C 0 I 1
s Callibella_humilis.k141_1233062                            11742 12 +     18648 cc--cgg--cc---------tt---------t-t------------------t
i Callibella_humilis.k141_1233062                        C 0 I 1
s Callimico_goeldii.k141_1609886                             11256 12 -     13885 cc--agg--cc---------tt---------t-t------------------g
i Callimico_goeldii.k141_1609886                         C 0 I 1
s Callithrix_geoffroyi.k119_459277                            3347 12 -      8861 cc--cag--cc---------tt---------t-t------------------t
i Callithrix_geoffroyi.k119_459277                       C 0 I 1
s Callithrix_jacchus.pat_scaffold_3                      165455736 12 + 189096842 cc--cgg--cc---------tt---------t-t------------------t
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 1
s Callithrix_kuhlii.k119_102356                               3258 12 +      8664 cc--cgg--cc---------tt---------t-t------------------t
i Callithrix_kuhlii.k119_102356                          C 0 I 1
s Capromys_pilorides.CapPil_scaffold_762519                   1072 12 -      1607 tc--acg--cct--------tt---------t-t-------------------
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272374 13 +    496798 TC--Agg--tc---------tt---------ttt------------------t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29246 22 -     39886 tc--agg--cct--------tttttttttttt-t------------------t
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997959 12 +  23392119 NN--NNN--NN--------NNN---------N-N-------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001401 12 +  23407841 tc--aag--cct--------tt---------t-t-------------------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64480 12 -     66877 tc--aag--cct--------tt---------t-t-------------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6657 12 -     12580 cc--cgg--cc---------tt---------t-t------------------t
i Cebuella_niveiventris.k141_592277                      C 0 I 1
s Cebuella_pygmaea.k141_145798                               44715 12 +     53515 cc--tgg--cc---------tt---------t-t------------------t
i Cebuella_pygmaea.k141_145798                           C 0 I 1
s Cebus_albifrons.Contig27                                  374469  9 -  26074798 cc--agg--cc---------tt-------------------------------
i Cebus_albifrons.Contig27                               C 0 I 2
s Cebus_olivaceus.k141_1404781                                9525  9 -     34880 cc--agg--cc---------tt-------------------------------
i Cebus_olivaceus.k141_1404781                           C 0 I 3
s Cebus_unicolor.k141_1654760                                68621  9 -     89041 cc--agg--cc---------tt-------------------------------
i Cebus_unicolor.k141_1654760                            C 0 I 3
s Cephalopachus_bancanus.k141_1689090                         4333 13 -      5494 tc--agg--tc---------tt---------ttt------------------t
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                142849 12 -   4669795 TC--GGg--cc---------tt---------t-t------------------t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46588 12 +     47900 tc--ggg--cc---------tt---------t-t------------------t
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2021 12 -     14410 tc--ggg--cc---------tt---------t-t------------------t
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46405 10 -    148725 ----ggg--cc---------tt---------t-t------------------t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28681 12 -     40656 tc--agg--cc---------tt---------t-t------------------t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8640 12 +     20796 tc--agg--cc---------tt---------t-t------------------t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13754 12 -     17524 tc--agg--cc---------tt---------t-t------------------t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29486 12 -     34525 tc--agg--cc---------tt---------t-t------------------t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13266 12 -     25376 tc--agg--cc---------tt---------t-t------------------t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365853 12 -  39242232 tc--agg--cc---------tt---------t-t------------------t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271580 12 +  21565898 tc--agg--cc---------tt---------t-t------------------t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33945 12 -     45857 tc--agg--cc---------tt---------t-t------------------t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28846 12 -     32606 tc--agg--cc---------tt---------t-t------------------t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5009 12 +      8499 tc--agg--gc---------tt---------t-t------------------t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27407 12 +     70610 tc--agg--cc---------tt---------t-t------------------t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24368 12 +     36323 tc--agg--cc---------tt---------t-t------------------t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32242 12 -     33796 tc--agg--cc---------tt---------t-t------------------t
i Cheirogaleus_major.k141_666340                         C 0 I 1
s Cheirogaleus_medius.k141_759766                             6745 12 -     15404 tc--agg--cc---------tt---------t-t------------------t
i Cheirogaleus_medius.k141_759766                        C 0 I 1
s Cheracebus_lucifer.k141_2312002                            10462 12 -     32913 cc--agg--cc---------tt---------t-t------------------t
i Cheracebus_lucifer.k141_2312002                        C 0 I 1
s Cheracebus_lugens.k141_1179667                             20875 12 -     40346 cc--agg--cc---------tt---------t-t------------------t
i Cheracebus_lugens.k141_1179667                         C 0 I 1
s Cheracebus_regulus.k141_471822                             21130 12 +    216457 cc--agg--cc---------tt---------t-t------------------t
i Cheracebus_regulus.k141_471822                         C 0 I 1
s Cheracebus_torquatus.k141_890198                           20919 12 +     39636 cc--agg--cc---------tt---------t-t------------------t
i Cheracebus_torquatus.k141_890198                       C 0 I 1
s Chinchilla_lanigera.JH722012.1                           1240301 12 -   2543920 tc--cag--cct--------tt---------t-t-------------------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_2628359                            586 11 +      1057 -c--agg--cc---------tt---------c-t------------------t
i Chiropotes_albinasus.k141_2628359                      I 5 n 20
s Chiropotes_israelita.k141_313004                           43991 11 -    112038 -c--agg--cc---------tt---------t-t------------------t
i Chiropotes_israelita.k141_313004                       I 5 I 1
s Chiropotes_sagulatus.k141_1113111                           9542 11 +     34062 -a--agg--cc---------tt---------t-t------------------t
i Chiropotes_sagulatus.k141_1113111                      I 5 I 1
s Chlorocebus_aethiops.ctg25                                345269 12 +  18827391 tc--agg--cc---------tt---------t-t------------------t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11808 12 -     44032 tc--agg--cc---------tt---------t-t------------------t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306654 12 - 135778131 TC--AGg--cc---------tt---------t-t------------------t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411067 12 -   2368649 TC--AGG--CC---------TT---------T-T------------------C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380949 12 - 200372422 tc--agg--cc---------tt---------t-t------------------c
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4506 12 -     84244 tc--agg--cc---------tt---------t-t------------------c
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646952 31 -   1526836 tc--agt--tct--------tt---------t-tttgtttgttggttggttaa
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20145 12 +     50838 tc--aag--cct--------tt---------t-t-------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   8657 12 +     36344 tc--aag--ctt--------tt---------t-t-------------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29668 12 +     75252 tc--aag--cct--------tt---------t-t-------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294148 12 +  12879189 tt--ggg--cc---------tt---------t-t------------------t
i Daubentonia_madagascariensis.ctg71                     C 0 I 1
s Dinomys_branickii.DinBra_scaffold_10381                   100375 12 -    115145 tc--atg--cct--------tt---------t-t-------------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952136 13 -  37912305 tc--agg--cct--------tt---------c-t------------------g
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   7066 10 -     10735 tc--agg--cct--------tt-------------------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10758 12 +     14636 tc--aag--cct--------tt---------t-t-------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Erythrocebus_patas.Contig38                               264796 12 +  21539334 tc--agg--cc---------tt---------t-t------------------t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16361 12 -     24895 tc--agg--cc---------tt---------t-t------------------t
i Eulemur_albifrons.k141_51491                           C 0 I 1
s Eulemur_collaris.k141_601111                               44071 11 -     70999 tc--agg--cc---------tt---------t-t-------------------
i Eulemur_collaris.k141_601111                           C 0 I 1
s Eulemur_coronatus.k141_384460                              88041 12 +    112731 tc--agg--cc---------tt---------t-t------------------t
i Eulemur_coronatus.k141_384460                          C 0 I 1
s Eulemur_flavifrons.k141_433119                             44604 12 +     68309 tc--agg--cc---------tt---------t-t------------------t
i Eulemur_flavifrons.k141_433119                         C 0 I 1
s Eulemur_fulvus.k141_636316                                 54928 12 -     65740 tc--agg--cc---------tt---------t-t------------------t
i Eulemur_fulvus.k141_636316                             C 0 I 1
s Eulemur_macaco.k141_1562045                                25560 12 -     75513 tc--agg--cc---------tt---------t-t------------------t
i Eulemur_macaco.k141_1562045                            C 0 I 1
s Eulemur_mongoz.k141_232305                                 49755 12 -     97555 tc--agg--cc---------tt---------t-t------------------t
i Eulemur_mongoz.k141_232305                             C 0 I 1
s Eulemur_rubriventer.k141_1423786                            6479 12 +     30972 tc--agg--cc---------tt---------t-t------------------t
i Eulemur_rubriventer.k141_1423786                       C 0 I 1
s Eulemur_rufus.k141_514691                                  44199 11 -     52037 tc--agg--cc---------tt---------t-t-------------------
i Eulemur_rufus.k141_514691                              C 0 I 1
s Eulemur_sanfordi.k141_1122526                              60602 12 -    111500 tc--agg--cc---------tt---------t-t------------------t
i Eulemur_sanfordi.k141_1122526                          C 0 I 1
s Fukomys_damarensis.KN121974.1                            2923712 12 -   3816255 tg--aag--cct--------tt---------t-a-------------------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2744 14 -     28519 tc--agg--cctt-------tt---------t-t------------------t
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2885  7 -      6791 tc--ccc--cc------------------------------------------
i Glis_glis.GliGli_scaffold_163929                       C 0 I 1
s Gorilla_beringei.k141_3586045                              19559 12 -     19819 tc--aga--cc---------tt---------t-t------------------t
i Gorilla_beringei.k141_3586045                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                257978 12 - 186649187 tc--aga--cc---------tt---------t-t------------------t
i Gorilla_gorilla.LT578341.1                             C 0 I 68
s Graphiurus_murinus.GraMur_scaffold_10447                    3954  9 -     78134 gcacaca--cc------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 1
s Hapalemur_alaotrensis.k141_330369                          16289 12 -     40692 tc--agg--cc---------tt---------t-t------------------t
i Hapalemur_alaotrensis.k141_330369                      C 0 I 1
s Hapalemur_gilberti.k141_646465                             37688 12 +     49394 tc--agg--cc---------tt---------t-t------------------t
i Hapalemur_gilberti.k141_646465                         C 0 I 1
s Hapalemur_griseus.k141_763500                              62559 12 -     66874 tc--agg--cc---------tt---------t-t------------------t
i Hapalemur_griseus.k141_763500                          C 0 I 1
s Hapalemur_meridionalis.k141_258450                         11430 12 -     42923 tc--agg--cc---------tt---------t-t------------------t
i Hapalemur_meridionalis.k141_258450                     C 0 I 1
s Hapalemur_occidentalis.k141_578367                         18432 12 -     53142 tc--agg--cc---------tt---------t-t------------------t
i Hapalemur_occidentalis.k141_578367                     C 0 I 1
s Heterocephalus_glaber.JH602082.1                         1934093 12 -  22651954 tg--aag--cct--------tt---------t-t-------------------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    144450 12 -    630532 tc--agg--cc---------tt---------t-t------------------t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73346 12 +    143317 tc--aag--cct--------tt---------t-t-------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7481 12 +     12352 tc--agg--cc---------tt---------t-t------------------t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14666 12 +     55766 tc--agg--cc---------tt---------t-t------------------t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054196 12 + 191637585 tc--agg--cc---------tt---------t-t------------------t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803074 12 +  11177569 tc--agg--cc---------tt---------t-t------------------t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8702 12 -    135385 tc--aag--cct--------tt---------t-t-------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388419 21 +   7955117 tc--aag--cctttttt---ct---------t-ttt---------------aa
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3977 12 +     11955 tc--agg--cc---------tt---------t-t------------------t
i Indri_indri.k141_2415743                               C 0 I 1
s Lagothrix_lagothricha.k141_246028                          44816 12 +    110728 cc--agg--cc---------tt---------t-t------------------t
i Lagothrix_lagothricha.k141_246028                      C 0 I 1
s Lemur_catta.scaffold_24                                 14761086 12 +  30322482 tc--agg--cc---------tt---------t-t------------------t
i Lemur_catta.scaffold_24                                C 0 I 1
s Leontocebus_fuscicollis.k141_2994775                        5716 12 -     13097 cc--aga--cc---------tt---------t-t------------------t
i Leontocebus_fuscicollis.k141_2994775                   C 0 N 0
s Leontocebus_illigeri.k141_2951200                           5470 12 +      5940 cc--aga--cc---------tt---------t-t------------------t
i Leontocebus_illigeri.k141_2951200                      C 0 N 0
s Leontocebus_nigricollis.k141_3905062                        5293 12 -      5717 cc--aga--cc---------tt---------t-t------------------t
i Leontocebus_nigricollis.k141_3905062                   C 0 N 0
s Leontopithecus_chrysomelas.k141_3286424                      445 12 +      8855 tc--agg--cc---------tt---------t-t------------------t
i Leontopithecus_chrysomelas.k141_3286424                C 0 I 1
s Leontopithecus_rosalia.k141_1583055                         5247 12 -     13645 tc--agg--cc---------tt---------t-t------------------t
i Leontopithecus_rosalia.k141_1583055                    C 0 I 1
s Lepilemur_ankaranensis.k141_567626                         10602 12 +     29618 tc--agg--gc---------tt---------t-t------------------t
i Lepilemur_ankaranensis.k141_567626                     C 0 I 1
s Lepilemur_dorsalis.k141_387009                             10598 12 +     31569 tc--agg--gc---------tt---------t-t------------------t
i Lepilemur_dorsalis.k141_387009                         C 0 I 1
s Lepilemur_ruficaudatus.k141_330196                         10608 12 +     24756 tc--agg--gc---------tt---------t-t------------------t
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 1
s Lepilemur_septentrionalis.k141_360456                      10608 12 +     16388 tc--agg--gc---------tt---------t-t------------------t
i Lepilemur_septentrionalis.k141_360456                  C 0 I 1
s Lophocebus_aterrimus.ctg367                               335731 12 -   1826925 tc--ggg--cc---------tt---------t-t------------------t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47123 12 -     61512 tc--ggg--cc---------tt---------t-t------------------t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374785 12 -  60120075 tc--ggg--cc---------tt---------t-t------------------t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27053 12 +     30207 tc--ggg--cc---------tt---------t-t------------------t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1891 12 -      5035 tc--ggg--cc---------tt---------t-t------------------t
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27006 12 +     30527 tc--agg--cc---------tt---------t-t------------------t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38182 12 -     50087 tc--ggg--cc---------tt---------t-t------------------t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47926 12 +     51645 tc--ggg--cc---------tt---------t-t------------------t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417129 12 - 187317192 TC--GGg--cc---------tt---------t-t------------------t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401359 12 +  25927173 TC--GGG--CC---------TT---------T-T------------------T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50531 12 -     62418 tc--ggg--cc---------tt---------t-t------------------t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3062 12 +     14901 tc--ggg--cc---------tt---------t-t------------------t
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47003 12 +     59329 tc--ggg--cc---------tt---------t-t------------------t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272911 12 +    668171 tc--ggg--cc---------tt---------t-t------------------t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1543 12 -      5049 tc--ggg--cc---------tt---------t-t------------------t
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4709 12 +     17132 tc--ggg--cc---------tt---------t-t------------------t
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324199 12 +  24302211 tc--ggg--cc---------tt---------t-t------------------t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359030 12 -    752769 tc--ggg--cc---------tt---------t-t------------------t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502632 21 +  40650429 tc--aag--cctttttt---ct---------t-tt---------------aaa
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_582562                                11840 12 +     17804 cc--cgg--cc---------tt---------t-t------------------t
i Mico_argentatus.k141_582562                            C 0 I 1
s Mico_humeralifer.k141_1180625                              12340 12 -     12984 cc--cgg--cc---------tt---------t-t------------------t
i Mico_humeralifer.k141_1180625                          C 0 I 1
s Mico_schneideri.k141_1877700                                     20659 12 -     26561 cc--cgg--cc---------tt---------t-t------------------t
i Mico_schneideri.k141_1877700                                 C 0 I 1
s Microcebus_murinus.CM007674.1                           74986440 12 +  93316391 CC--AGG--CC---------TT---------T-T------------------T
i Microcebus_murinus.CM007674.1                          C 0 I 1
s Miopithecus_ogouensis.k141_1534655                         24297 12 -     27822 tc--agg--cc---------tt---------t-t------------------t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54215 12 -     62432 tc--agg--cc---------tt---------t-t------------------t
i Mirza_zaza.k141_766280                                 C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_5560                978  2 -    124358 CC---------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64660 12 +     67721 cc--aag--cct--------tt---------t-t-------------------
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              31074 12 +     34575 tc--agg--cc---------tt---------t-t------------------t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55382  9 -    132029 tc--agg--cc---------tt-------------------------------
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11477 12 -     16345 tc--agg--cc---------tt---------t-t------------------t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17362 12 +     22201 tc--agg--cc---------tt---------t-t------------------t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415583 12 -  22158432 tc--agg--cc---------tt---------t-t------------------t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27760 12 -     54323 tc--agg--cc---------tt---------t-t------------------t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Octodon_degus.JH651603.1                                11056755 12 -  11899542 tc--aag--cct--------tt---------t-t-------------------
i Octodon_degus.JH651603.1                               C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  777 12 +      1339 TC--AGA--Cc---------tt---------t-t------------------t
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.NBAG03003182.1                             15155 13 -     24457 TC--AGA--CCt--------tt---------t-t------------------t
i Pan_troglodytes.NBAG03003182.1                         I 1548 I 1058
s Papio_anubis.CM001495.2                                   245208 12 - 183742232 TC--GGg--cc---------tt---------t-t------------------t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11493 12 +     21308 tc--ggg--cc---------tt---------t-t------------------t
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294236 12 -  20919399 tc--ggg--cc---------tt---------t-t------------------t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24133 12 -     27687 tc--ggg--cc---------tt---------t-t------------------t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     812 12 +     10553 tc--ggg--cc---------tt---------t-t------------------t
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   772 12 -     10386 tc--ggg--cc---------tt---------t-t------------------t
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3472 13 +      9367 tc--aag--cat--------tt---------c-t------------------g
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33628 12 -     56120 tg--caa--ct--------ggt---------t-g-------------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                            4456 12 +     55023 tc--agg--cc---------tt---------t-t------------------t
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3978 12 -     89929 tc--agg--cc---------tt---------t-t------------------t
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4568 12 +     40849 tc--agg--cc---------tt---------t-t------------------t
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256298 12 +  14605196 TC--AGg--cc---------tt---------t-t------------------t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66358 12 +    207309 cc--agg--cc---------tt---------c-t------------------c
i Pithecia_albicans.k141_1239476                         C 0 I 1
s Pithecia_chrysocephala.k141_785207                          7446 12 -     25401 cc--agg--cc---------tt---------c-t------------------c
i Pithecia_chrysocephala.k141_785207                     C 0 I 1
s Pithecia_hirsuta.k141_640380                               33194 12 +     58159 cc--agg--cc---------tt---------c-t------------------c
i Pithecia_hirsuta.k141_640380                           C 0 I 1
s Pithecia_mittermeieri.k141_1280039                         33470 12 +     63561 cc--agg--cc---------tt---------c-t------------------c
i Pithecia_mittermeieri.k141_1280039                     C 0 I 1
s Pithecia_pissinattii.k141_878371                           33230 12 +     51148 cc--agg--cc---------tt---------c-t------------------c
i Pithecia_pissinattii.k141_878371                       C 0 I 1
s Pithecia_pithecia.tarseq_165                              558200 12 -   4542175 cc--agg--cc---------tt---------c-t------------------c
i Pithecia_pithecia.tarseq_165                           C 0 I 1
s Pithecia_vanzolinii.k141_1369553                           33214 12 +     51125 cc--agg--cc---------tt---------c-t------------------c
i Pithecia_vanzolinii.k141_1369553                       C 0 I 1
s Plecturocebus_bernhardi.k141_2549090                        9631 12 +     39866 cc--agg--cc---------tt---------t-t------------------t
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 1
s Plecturocebus_brunneus.k141_862875                          4713 12 -      9282 cc--agg--cc---------tt---------t-t------------------t
i Plecturocebus_brunneus.k141_862875                     C 0 I 1
s Plecturocebus_caligatus.k141_1382851                       44117 12 -     87950 cc--agg--cc---------tt---------t-t------------------t
i Plecturocebus_caligatus.k141_1382851                   C 0 I 1
s Plecturocebus_cinerascens.k141_1164729                     44511 12 -     88961 cc--agg--cc---------tt---------t-t------------------t
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 1
s Plecturocebus_cupreus.k141_2351393                          9209 12 -     39403 cc--agg--cc---------tt---------t-t------------------t
i Plecturocebus_cupreus.k141_2351393                     C 0 I 1
s Plecturocebus_dubius.k141_1058799                          44160 12 +     87928 cc--agg--cc---------tt---------t-t------------------t
i Plecturocebus_dubius.k141_1058799                      C 0 I 1
s Plecturocebus_grovesi.k141_2013005                          9208 12 -     60166 cc--agg--cc---------tt---------t-t------------------t
i Plecturocebus_grovesi.k141_2013005                     C 0 I 1
s Plecturocebus_hoffmannsi.k141_3303950                      16145 12 -     67232 cc--agg--cc---------tt---------t-t------------------t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 1
s Plecturocebus_miltoni.k141_349282                          44061 12 -     90634 cc--agg--cc---------tt---------t-t------------------t
i Plecturocebus_miltoni.k141_349282                      C 0 I 1
s Plecturocebus_moloch.k141_1031110                          45528 12 +     89403 cc--agg--cc---------tt---------t-t------------------t
i Plecturocebus_moloch.k141_1031110                      C 0 I 1
s Pongo_abelii.CM009266.2                                   181136 12 - 189387572 TC--AGA--Cc---------tt---------t-t------------------t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195876 12 -   9816681 tc--aga--cc---------tt---------t-t------------------t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29656 12 +     69807 tc--agg--cc---------tt---------t-t------------------t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46837 12 -     80239 tc--agg--cc---------tt---------t-t------------------t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984234 12 +   4620579 TC--AGG--CC---------TT---------T-T------------------T
i Prolemur_simus.MPIZ01000396.1                          C 0 I 1
s Propithecus_coquerelli.NW_012148875.1                    1567729 12 -   2598838 tc--agg--cc---------tt---------t-T------------------T
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 1
s Propithecus_coronatus.k141_209299                           5367 12 -      7103 tc--agg--cc---------tt---------t-t------------------t
i Propithecus_coronatus.k141_209299                      C 0 I 1
s Propithecus_diadema.k141_153680                             5964 12 -     11706 tc--agg--cc---------tt---------t-t------------------t
i Propithecus_diadema.k141_153680                        C 0 I 1
s Propithecus_edwardsi.k141_635656                            9701 12 -     30655 tc--agg--cc---------tt---------t-t------------------t
i Propithecus_edwardsi.k141_635656                       C 0 I 1
s Propithecus_perrieri.k141_1496898                          36015 12 +     46564 tc--agg--cc---------tt---------t-t------------------t
i Propithecus_perrieri.k141_1496898                      C 0 I 1
s Propithecus_tattersalli.k141_1127767                       96294 12 -     98465 tc--agg--cc---------tt---------t-t------------------t
i Propithecus_tattersalli.k141_1127767                   C 0 I 1
s Propithecus_verreauxi.k141_1047036                          9933 12 +     35169 tc--agg--cc---------tt---------t-t------------------t
i Propithecus_verreauxi.k141_1047036                     C 0 I 1
s Pygathrix_cinerea.k141_1153803                             29023 12 +     91421 tc--agg--cc---------tt---------t-t------------------t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155575 12 -   7812017 tc--agg--cc---------tt---------t-t------------------c
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9880 12 +     72585 tc--agg--cc---------tt---------t-t------------------c
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3487 12 +      7119 tc--agg--cc---------tt---------t-t------------------t
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124157 12 + 195417433 TC--AGg--cc---------tt---------t-t------------------t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238329 12 -   7961872 tc--agg--cc---------tt---------t-t------------------t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_2012906                                585 12 -      1130 cc--agg--cc---------tt---------c-t------------------t
i Saguinus_bicolor.k141_2012906                          C 0 N 0
s Saguinus_geoffroyi.k141_3779887                             5482 12 +      6077 cc--agg--cc---------tt---------t-t------------------t
i Saguinus_geoffroyi.k141_3779887                        C 0 N 0
s Saguinus_imperator.k141_1898058                             5576 12 +      5971 cc--agg--cc---------tt---------t-t------------------t
i Saguinus_imperator.k141_1898058                        C 0 N 0
s Saguinus_inustus.k141_2469308                               5493 12 +      5932 cc--agg--cc---------tt---------t-t------------------t
i Saguinus_inustus.k141_2469308                          C 0 N 0
s Saguinus_labiatus.k141_2380921                              3838 12 -      4390 cc--agg--cc---------tt---------t-t------------------t
i Saguinus_labiatus.k141_2380921                         C 0 N 0
s Saguinus_midas.LG03                                       393595 12 - 209938924 cc--agg--cc---------tt---------c-t------------------t
i Saguinus_midas.LG03                                    C 0 I 849
s Saguinus_mystax.k141_8077960                                5441 12 +      5979 cc--agg--cc---------tt---------t-t------------------t
i Saguinus_mystax.k141_8077960                           C 0 N 0
s Saguinus_oedipus.k141_1280589                               2011 12 -     22275 cc--agg--cc---------tt---------t-t------------------t
i Saguinus_oedipus.k141_1280589                          C 0 N 0
s Saimiri_boliviensis.NW_024100920.1                       1110611 12 + 121099817 CC--AGG--cc---------tt---------t-t------------------t
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 1
s Saimiri_cassiquiarensis.k141_1467335                       32178 12 -     47369 cc--agg--cc---------tt---------t-t------------------t
i Saimiri_cassiquiarensis.k141_1467335                   C 0 I 1
s Saimiri_macrodon.k141_1173117                              32564 12 -     79414 cc--agg--cc---------tt---------t-t------------------t
i Saimiri_macrodon.k141_1173117                          C 0 I 1
s Saimiri_oerstedii.k141_245838                              29255 12 -     34454 cc--agg--cc---------tt---------t-t------------------t
i Saimiri_oerstedii.k141_245838                          C 0 I 1
s Saimiri_sciureus.k141_1467173                              16656 12 -     22428 cc--agg--cc---------tt---------t-t------------------t
i Saimiri_sciureus.k141_1467173                          C 0 I 1
s Saimiri_ustus.k141_360372                                  31810 12 -     47109 cc--agg--cc---------tt---------t-t------------------t
i Saimiri_ustus.k141_360372                              C 0 I 1
s Sapajus_apella.ctg103                                     239845  9 +   5703754 cc--agg--cc---------tt-------------------------------
i Sapajus_apella.ctg103                                  C 0 I 3
s Sapajus_macrocephalus.k141_796559                           9435  9 +     21866 cc--agg--cc---------tt-------------------------------
i Sapajus_macrocephalus.k141_796559                      C 0 I 3
s Semnopithecus_entellus.k141_583282                           462 12 +     11297 tc--agg--cc---------tt---------t-t------------------t
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30855 12 +     58920 tc--agg--cc---------tt---------t-t------------------t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17353 12 -     45317 tc--agg--cc---------tt---------t-t------------------t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25011 12 -     42441 tc--agg--cc---------tt---------t-t------------------t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27687 12 -     29113 tc--agg--cc---------tt---------t-t------------------t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30764 12 -     48123 tc--agg--cc---------tt---------t-t------------------t
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1869997 21 +   3870691 tc--aag--cctttttt---ct---------t-ttt---------------aa
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392848 12 +   1523678 tc--agg--cc---------tt---------t-t------------------t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2287 13 +      9917 tc--agg--tc---------tt---------ctt------------------t
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9085 13 +     20590 tc--agg--tc---------tt---------ctt------------------t
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355017 12 - 186847797 TC--GGg--cc---------tt---------t-t------------------t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25845 12 -     33621 tg--caa--cct--------tt---------t-t-------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22765 12 +     26378 tc--agg--cc---------tt---------t-t------------------t
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35564 12 -     78344 tc--agg--cc---------tt---------t-t------------------t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22090 12 +     25722 tc--agg--cc---------tt---------t-t------------------t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30520 12 -     62838 tc--agg--cc---------tt---------t-t------------------t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30509 12 +     46913 tc--agg--cc---------tt---------t-c------------------t
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11248 12 -     28527 tc--agg--cc---------tt---------t-t------------------t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32455 12 -     64340 tc--agg--cc---------tt---------t-t------------------t
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30493 12 -     63452 tc--agg--cc---------tt---------t-t------------------t
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11940 12 +     22490 tc--agg--cc---------tt---------t-t------------------t
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5306 12 -      6147 tc--agg--cc---------tt---------t-t------------------t
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12219 12 -     13050 tc--agg--cc---------tt---------t-t------------------t
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257383 12 -   6242583 tc--agg--cc---------tt---------t-t------------------t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3479 12 +     19340 tc--agg--cc---------tt---------t-c------------------t
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836983 13 -   4065304 tc--aag--cct--------tt---------t-t------------------c
i Tupaia_chinensis.KB320699.1                            I 272 C 0
s Tupaia_tana.TupTan_flattened_line_394                      11014 13 -     70247 tc--aag--cct--------tt---------t-t------------------c
i Tupaia_tana.TupTan_flattened_line_394                  I 272 C 0
s Varecia_rubra.k141_787544                                  26884 12 -     30710 tc--agg--cc---------tt---------t-t------------------t
i Varecia_rubra.k141_787544                              C 0 I 1
s Varecia_variegata.k141_289850                              25791 12 -    147434 tc--agg--cc---------tt---------t-t------------------t
i Varecia_variegata.k141_289850                          C 0 I 1
s Xerus_inauris.XerIna_scaffold_2302                        175753 24 -    224448 tc--aag--cctttttttattt---------t-tt---------------aaa
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156  0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380  0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524  0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699  0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316  3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992  0 +  89631738 C
e Mus_musculus.chr8                                       41689686  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513  0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334  0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274  0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700  0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8829 37 +     36723 at-aa-gg-g----tacta---------aaccca-ttcatgaagggtccaccct
s Allenopithecus_nigroviridis.k141_3755588                   49779 37 +     53615 at-ac-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1806 37 +     13857 at-aa-gg-g----cacta---------aaccca-ttcatgaaggcttcaccct
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18361 37 -     21945 at-aa-gg-g----cacta---------aaccca-ttcatgaaggcttcaccct
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20046 37 +     32033 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73813 37 -     84148 at-aa-gg-g----cacta---------aacccatt-catgaaggctccaccct
i Alouatta_belzebul.k141_1011583                         I 1 C 0
s Alouatta_caraya.k141_1109140                               46052 36 -     78289 at-aa--g-g----cacta---------aacccatt-catgaaggctcctccct
i Alouatta_caraya.k141_1109140                           I 1 C 0
s Alouatta_discolor.k141_2561099                             45491 37 +     55831 at-aa-gg-g----cacta---------aacccatt-catgaaggctcctccct
i Alouatta_discolor.k141_2561099                         I 1 C 0
s Alouatta_juara.k141_1687208                                43941 37 -     64179 at-aa-gg-g----cacta---------aacccatt-catgaaggctcctccct
i Alouatta_juara.k141_1687208                            I 1 C 0
s Alouatta_macconnelli.k141_1277969                           1049 37 -      3959 at-aa-gg-g----cacta---------aacccatt-catgaaggctcctccct
i Alouatta_macconnelli.k141_1277969                      I 1 C 0
s Alouatta_nigerrima.k141_376068                             42566 37 +     45454 at-aa-gg-g----cacta---------aacctatt-catgaaggctccaccct
i Alouatta_nigerrima.k141_376068                         I 1 C 0
s Alouatta_palliata.k141_638677                              48215 37 +     70886 at-aa-gg-g----cacta---------aacccatt-catgaaggctcctccct
i Alouatta_palliata.k141_638677                          I 1 C 0
s Alouatta_puruensis.k141_251022                             10388 37 +     30854 at-aa-gg-g----cacta---------aacctatt-catgaaggctccaccgt
i Alouatta_puruensis.k141_251022                         I 1 C 0
s Alouatta_seniculus.k141_928287                             34522 37 +     42133 at-aa-gg-g----cacta---------aacctatt-catgaaggctccaccct
i Alouatta_seniculus.k141_928287                         I 1 C 0
s Aotus_azarae.k141_887050                                    2755 37 +     17741 at-aa-gg-g----cacta---------agcccgtt-caggaaggctccaccct
i Aotus_azarae.k141_887050                               I 1 C 0
s Aotus_griseimembra.k141_3192254                             3380 37 -     15923 at-aa-gg-g----cacta---------agcccatt-caggaaggctccaccct
i Aotus_griseimembra.k141_3192254                        I 1 C 0
s Aotus_nancymaae.KZ198451.1                                673662 37 +   5030052 at-aa-gg-g----cacta---------agcccatt-caggaaggctccaccct
i Aotus_nancymaae.KZ198451.1                             I 1 C 0
s Aotus_trivirgatus.k141_318729                               3656 37 -     16391 at-aa-gg-g----cacta---------agcccgtt-caggaaggctccaccct
i Aotus_trivirgatus.k141_318729                          I 1 C 0
s Aotus_vociferans.k141_1514463                               3215 37 -     17186 at-aa-gg-g----cacta---------agcccgtt-caggaaggctccaccct
i Aotus_vociferans.k141_1514463                          I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25536 36 -     32367 a--aa-ag-g----cacta---------attcca-tctacaaggagtccacctt
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276278 37 +  21539123 at-aa-gg-g----cacta---------aacccatt-catgaaggctccaccct
i Ateles_geoffroyi_b.tarseq_1536                            I 1 C 0
s Ateles_belzebuth.k141_1572163                              12444 37 +     48076 at-aa-gg-g----cacta---------aacccatt-catgaaggctccaccct
i Ateles_belzebuth.k141_1572163                          I 1 C 0
s Ateles_chamek.k141_615173                                   7579 37 -     28759 at-aa-gg-g----cacta---------aacccatt-catgaaggctccaccct
i Ateles_chamek.k141_615173                              I 1 C 0
s Ateles_geoffroyi_a.k141_1283730                              35135 37 +     44353 at-aa-gg-g----cacta---------aacccatt-catgaaggctccaccct
i Ateles_geoffroyi_a.k141_1283730                          I 1 C 0
s Ateles_marginatus.k141_970259                              50504 37 -     71267 at-aa-gg-g----cacta---------aacccatt-catgaaggctccaccct
i Ateles_marginatus.k141_970259                          I 1 C 0
s Ateles_paniscus.k141_866194                                24562 37 -     33135 at-aa-gg-g----cacta---------aacccatt-catgaaggctccaccct
i Ateles_paniscus.k141_866194                            I 1 C 0
s Avahi_laniger.k141_2756659                                  7848 37 +     11645 tt-at-gg-g----cacta---------atccca-ttcacgagggctccatcct
i Avahi_laniger.k141_2756659                             I 1 C 0
s Avahi_peyrierasi.k141_1823318                               7856 37 -     19611 tt-at-gg-a----cacta---------atccca-ttcacgagggctccatcct
i Avahi_peyrierasi.k141_1823318                          I 1 C 0
s Cacajao_ayresi.k141_96119                                   9369 36 +     28062 at-aa-gg-g----cacta---------aaccca-t-cgtgaaggctccaccct
i Cacajao_ayresi.k141_96119                              I 1 C 0
s Cacajao_calvus.k141_89051                                  44663 36 -     91139 at-aa-gg-g----cacta---------aaccca-t-cgtgaaggctccaccct
i Cacajao_calvus.k141_89051                              I 1 C 0
s Cacajao_hosomi.k141_81245                                  22189 36 +     95584 at-aa-gg-g----cacta---------aaccca-t-cgtgaaggctccaccct
i Cacajao_hosomi.k141_81245                              I 1 C 0
s Cacajao_melanocephalus.k141_619699                         22102 36 +    119600 at-aa-gg-g----cacta---------aaccca-t-cgtgaaggctccaccct
i Cacajao_melanocephalus.k141_619699                     I 1 C 0
s Callibella_humilis.k141_1233062                            11755 37 +     18648 at-aa-gg-g----cactg---------aacccatt-catgaaggctccaccct
i Callibella_humilis.k141_1233062                        I 1 C 0
s Callimico_goeldii.k141_1609886                             11269 35 -     13885 at-aa-gg-g----cactg---------aacccatt-cattaaggc--caccct
i Callimico_goeldii.k141_1609886                         I 1 C 0
s Callithrix_geoffroyi.k119_459277                            3360 37 -      8861 at-aa-gg-g----cactg---------aacccatt-catgaaggctccaccct
i Callithrix_geoffroyi.k119_459277                       I 1 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455749 37 + 189096842 at-aa-gg-g----cactg---------aacccatt-catgaaggctccaccct
i Callithrix_jacchus.pat_scaffold_3                      I 1 C 0
s Callithrix_kuhlii.k119_102356                               3271 37 +      8664 at-aa-gg-g----cactg---------aacccatt-catgaaggctccaccct
i Callithrix_kuhlii.k119_102356                          I 1 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1084 36 -      1607 aa--a-tg-a----cttta---------atccca-atgagaaggactccatcct
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272387 37 +    496798 at-aa-gg-g----ctcta---------attcta-ctcacaagggctgcacctt
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29268 37 -     39886 at-aa-ga-g----tgcta---------atccta-tttacaaggattttgctct
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4997971 37 +  23392119 NN--NNNN-N----NNNNN---------NNNNNN-NNNNNNNNNNNNNNNNNNN
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001413 37 +  23407841 aa--aagg-g----tatta---------atacca-ttgagaaagactccatcat
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64492 37 -     66877 aa--aagg-g----tatta---------atacca-ttgagaaagactccatcat
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6670 37 -     12580 at-aa-gg-g----cactg---------aacccatt-catgaaggctccaccct
i Cebuella_niveiventris.k141_592277                      I 1 C 0
s Cebuella_pygmaea.k141_145798                               44728 37 +     53515 at-aa-gg-g----cactg---------aacccagt-catgaaggctccaccct
i Cebuella_pygmaea.k141_145798                           I 1 C 0
s Cebus_albifrons.Contig27                                  374480 37 -  26074798 at-aa-gg-g----cacta---------aacccatt-catgaaggctccacact
i Cebus_albifrons.Contig27                               I 2 C 0
s Cebus_olivaceus.k141_1404781                                9537 37 -     34880 at-aa-gg-g----cacta---------aacccatt-catgaaggctccacact
i Cebus_olivaceus.k141_1404781                           I 3 C 0
s Cebus_unicolor.k141_1654760                                68633 37 -     89041 at-aa-gg-g----cacta---------aacccatt-catgaaggctccacact
i Cebus_unicolor.k141_1654760                            I 3 C 0
s Cephalopachus_bancanus.k141_1689090                         4346 37 -      5494 at-aa-gg-g----ctcta---------attcta-ctcacaagggctgcacctt
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                142861 37 -   4669795 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46600 37 +     47900 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2033 37 -     14410 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46415 37 -    148725 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28693 37 -     40656 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8652 37 +     20796 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13766 37 -     17524 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29498 37 -     34525 at-aa-gg-g----catta---------aaccca-ttcatgaaggctccaccct
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13278 37 -     25376 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365865 37 -  39242232 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271592 37 +  21565898 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33957 37 -     45857 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28858 37 -     32606 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5021 37 +      8499 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27419 37 +     70610 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24380 37 +     36323 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32255 37 -     33796 tt-at-gg-g----cacaa---------atccca-ttcacaagggctcgatcct
i Cheirogaleus_major.k141_666340                         I 1 C 0
s Cheirogaleus_medius.k141_759766                             6758 37 -     15404 tt-at-gg-g----cacta---------atccca-ttcacgagggctcgatcct
i Cheirogaleus_medius.k141_759766                        I 1 C 0
s Cheracebus_lucifer.k141_2312002                            10475 36 -     32913 gt-aa-gg-g----cacta---------aaccca-t-catgaaggctccaccct
i Cheracebus_lucifer.k141_2312002                        I 1 C 0
s Cheracebus_lugens.k141_1179667                             20888 36 -     40346 gt-aa-gg-g----cacta---------aaccca-t-catgaaggctccaccct
i Cheracebus_lugens.k141_1179667                         I 1 C 0
s Cheracebus_regulus.k141_471822                             21143 36 +    216457 gt-aa-gg-g----cacta---------aaccca-t-catgaaggctccaccct
i Cheracebus_regulus.k141_471822                         I 1 C 0
s Cheracebus_torquatus.k141_890198                           20932 36 +     39636 gt-aa-gg-g----cacta---------aaccca-t-catgaaggctccaccct
i Cheracebus_torquatus.k141_890198                       I 1 C 0
s Chinchilla_lanigera.JH722012.1                           1240313 37 -   2543920 aa--a-ataa----catta---------atctca-ttgagaaagactccatcct
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1091259                          32905 37 -     52013 at-aa-gg-g----cacta---------aacccgtt-catgaagacttcaccct
i Chiropotes_albinasus.k141_1091259                      I 20 C 0
s Chiropotes_israelita.k141_313004                           44003 36 -    112038 at-aa-gg-g----cacta---------aaccca-t-cgtgaaggctccaccct
i Chiropotes_israelita.k141_313004                       I 1 C 0
s Chiropotes_sagulatus.k141_1113111                           9554 36 +     34062 at-aa-gg-g----cacta---------aaccca-t-cgtgaaggctccaccct
i Chiropotes_sagulatus.k141_1113111                      I 1 C 0
s Chlorocebus_aethiops.ctg25                                345281 37 +  18827391 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11820 37 -     44032 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306666 37 - 135778131 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctgcaccct
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411079 37 -   2368649 AT-AA-GG-G----CGCTA---------aaccca-ttcatgaaggctccaccct
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380961 37 - 200372422 tt-aa-gg-g----cgcta---------aaccca-ttcatgaaggctccaccct
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4518 37 -     84244 gt-aa-gg-g----cgcta---------aaccca-ttcatgaaggctccaccct
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    646983 34 -   1526836 at-aa-ag-g----caaca---------attcca-attg---tggctccatctt
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20157 37 +     50838 aa--a-ag-g---gcactg---------gtgcca-ctgaaaaggactccatcct
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   8669 37 +     36344 aa--aagg-g----tgtta---------atacca-ttgagaaaggctccatcat
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29680 37 +     75252 aa--aagg-g----cctta---------atccca-ctgagaaagactctgtcat
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294161 31 +  12879189 at-aa-gg-g----cactg---------atccca-ttcacaagagctc------
i Daubentonia_madagascariensis.ctg71                     I 1 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100387 37 -    115145 aa--a-aggg----catta---------atctca-ctaagaaagactccatcct
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952149 37 -  37912305 gt-aa-gg-a----cagta---------atccaa-ttcaaaaggactgtgtcct
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   7076 23 -     10735 ------------------------------ccaa-ttcaaaaggactctgtctt
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10770 33 +     14636 aa--aaag-t--------c---------ataaca-ttgggaaagacttcatcat
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Erythrocebus_patas.Contig38                               264808 37 +  21539334 at-aa-gg-g----cacta---------aaccca-ttcttgaaggctccaccct
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16374 37 -     24895 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Eulemur_albifrons.k141_51491                           I 1 C 0
s Eulemur_collaris.k141_601111                               44083 37 -     70999 ta-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Eulemur_collaris.k141_601111                           I 1 C 0
s Eulemur_coronatus.k141_384460                              88054 37 +    112731 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Eulemur_coronatus.k141_384460                          I 1 C 0
s Eulemur_flavifrons.k141_433119                             44617 37 +     68309 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Eulemur_flavifrons.k141_433119                         I 1 C 0
s Eulemur_fulvus.k141_636316                                 54941 37 -     65740 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Eulemur_fulvus.k141_636316                             I 1 C 0
s Eulemur_macaco.k141_1562045                                25573 37 -     75513 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Eulemur_macaco.k141_1562045                            I 1 C 0
s Eulemur_mongoz.k141_232305                                 49768 37 -     97555 tt-at-gg-g----cacta---------atccca-ttcactagggttccatcct
i Eulemur_mongoz.k141_232305                             I 1 C 0
s Eulemur_rubriventer.k141_1423786                            6492 37 +     30972 tt-at-gg-g----cacta---------atccca-ttcactaggactccatcct
i Eulemur_rubriventer.k141_1423786                       I 1 C 0
s Eulemur_rufus.k141_514691                                  44211 37 -     52037 ta-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Eulemur_rufus.k141_514691                              I 1 C 0
s Eulemur_sanfordi.k141_1122526                              60615 37 -    111500 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Eulemur_sanfordi.k141_1122526                          I 1 C 0
s Fukomys_damarensis.KN121974.1                            2923724 36 -   3816255 aa--a-gg-g----catta---------attcca-ttgagaaagactccattct
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2758 37 -     28519 at-aa-gg-g----cacta---------atccta-ttcatgagggctgcactgt
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2893 37 -      6791 at-aa-gg-g----cacta---------atccca-tttgcaaggactctaccct
i Glis_glis.GliGli_scaffold_163929                       I 1 C 0
s Gorilla_beringei.k141_3586045                              19571 37 -     19819 at-aa-gg-g----tacta---------aaccca-ttcatgaagggtccaccct
i Gorilla_beringei.k141_3586045                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 74488 37 +  33314783 at-aa-gg-g----tacta---------aaccca-ttcatgaagggtccaccct
i Gorilla_gorilla.LT578336.1                             I 14 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    3964 37 -     78134 at-aa-gc-g----cgcta---------atccct-tttgcacagactctaccct
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 I 29
s Hapalemur_alaotrensis.k141_330369                          16302 37 -     40692 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Hapalemur_alaotrensis.k141_330369                      I 1 C 0
s Hapalemur_gilberti.k141_646465                             37701 37 +     49394 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Hapalemur_gilberti.k141_646465                         I 1 C 0
s Hapalemur_griseus.k141_763500                              62572 37 -     66874 tt-at-gg-g----cacta---------atcccg-ttcactagggctccatcct
i Hapalemur_griseus.k141_763500                          I 1 C 0
s Hapalemur_meridionalis.k141_258450                         11443 37 -     42923 tt-at-gg-g----cacta---------atcccg-ttcactagggctccatcct
i Hapalemur_meridionalis.k141_258450                     I 1 C 0
s Hapalemur_occidentalis.k141_578367                         18445 37 -     53142 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Hapalemur_occidentalis.k141_578367                     I 1 C 0
s Heterocephalus_glaber.JH602082.1                         1934105 36 -  22651954 aa--a-gg-a----cagta---------attcca-ctgagaaagactccattct
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    144462 37 -    630532 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccatcct
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73358 37 +    143317 aa--aagg-g----catta---------atacca-ttgagaaagactccatcat
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7493 37 +     12352 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccatcct
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14678 37 +     55766 at-aa-gg-g----cacta---------aaccca-ttcctgaaggctccatcct
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054208 37 + 191637585 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccatcct
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803086 37 +  11177569 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccatcct
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       8714 36 -    135385 aa--a-ga-g----catta---------atccca-ttcactaaaactccatctt
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 557
s Ictidomys_tridecemlineatus.JH393364.1                     388440 37 +   7955117 at-aa-gg-g----cagca---------attctg-tttacaaggactgtaccct
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    3990 37 +     11955 tt-at-gg-g----cacta---------atccca-ttcatgagggctccatcct
i Indri_indri.k141_2415743                               I 1 C 0
s Lagothrix_lagothricha.k141_246028                          44829 37 +    110728 at-aa-gg-g----cacta---------aacccatt-catgaaggctccaccct
i Lagothrix_lagothricha.k141_246028                      I 1 C 0
s Lemur_catta.scaffold_24                                 14761099 37 +  30322482 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Lemur_catta.scaffold_24                                I 1 C 0
s Leontocebus_fuscicollis.k141_3470480                         310 37 -     23187 at-aa-gg-g----cacta---------aacccgtt-catgaagccttcaccct
i Leontocebus_fuscicollis.k141_3470480                   N 0 C 0
s Leontocebus_illigeri.k141_2759473                            623 37 -     14280 at-aa-gg-g----cacta---------aacccgtt-catgaagccttcaccct
i Leontocebus_illigeri.k141_2759473                      N 0 C 0
s Leontocebus_nigricollis.k141_1320036                         266 37 +      3713 at-aa-gg-g----cacta---------aacccgtt-catgaagccttcaccct
i Leontocebus_nigricollis.k141_1320036                   N 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      458 37 +      8855 at-aa-gg-g----cactg---------aacccatt-catgaaggctccaccct
i Leontopithecus_chrysomelas.k141_3286424                I 1 C 0
s Leontopithecus_rosalia.k141_1583055                         5260 37 -     13645 at-aa-gg-g----cactg---------aacccatt-catgaaggctccaccct
i Leontopithecus_rosalia.k141_1583055                    I 1 C 0
s Lepilemur_ankaranensis.k141_567626                         10615 37 +     29618 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Lepilemur_ankaranensis.k141_567626                     I 1 C 0
s Lepilemur_dorsalis.k141_387009                             10611 37 +     31569 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Lepilemur_dorsalis.k141_387009                         I 1 C 0
s Lepilemur_ruficaudatus.k141_330196                         10621 37 +     24756 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Lepilemur_ruficaudatus.k141_330196                     I 1 C 0
s Lepilemur_septentrionalis.k141_360456                      10621 37 +     16388 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Lepilemur_septentrionalis.k141_360456                  I 1 C 0
s Lophocebus_aterrimus.ctg367                               335743 37 -   1826925 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47135 37 -     61512 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374797 37 -  60120075 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27065 37 +     30207 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1903 37 -      5035 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27018 37 +     30527 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38194 37 -     50087 at-aa-gg-g----cacta---------aaccca-ttcatgaagtctccaccct
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47938 38 +     51645 atcaa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417141 37 - 187317192 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401371 38 +  25927173 ATCAA-GG-G----CACTA---------aaccca-ttcatgaaggctccaccct
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50543 37 -     62418 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3074 37 +     14901 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47015 38 +     59329 atcaa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272923 37 +    668171 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1555 37 -      5049 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4721 37 +     17132 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324211 37 +  24302211 at-aa-gg-a----cacta---------aacccg-ttcatgaaggctccaccct
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359042 37 -    752769 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502653 37 +  40650429 at-aa-gg-g----cagaa---------attctg-tttacaaggactctaccct
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mico_argentatus.k141_582562                                11853 37 +     17804 at-aa-gg-g----cactg---------aacccatt-catgaaggctccaccct
i Mico_argentatus.k141_582562                            I 1 C 0
s Mico_humeralifer.k141_1180625                              12353 37 -     12984 at-aa-gg-g----cactg---------aacccatt-catgaaggctccaccct
i Mico_humeralifer.k141_1180625                          I 1 C 0
s Mico_schneideri.k141_1877700                                     20672 37 -     26561 at-aa-gg-g----cactg---------aacccatt-catgaaggctccaccct
i Mico_schneideri.k141_1877700                                 I 1 C 0
s Microcebus_murinus.CM007674.1                           74986453 37 +  93316391 TT-at-gg-a----cacta---------atccca-ttcacaagggctcgatcct
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         24309 37 -     27822 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54228 37 -     62432 tt-at-gg-g----cacta---------atccca-ttcacaagggctcgatcct
i Mirza_zaza.k141_766280                                 I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560                980 24 -    124358 ----------------------------atccca-tttgaaaggactctacc-t
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64672 36 +     67721 aa--a-tg-a----catta---------atccta-ctgagaaggactccatcct
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              31086 37 +     34575 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55391 26 -    132029 ------------------a---------aaccca-ttcatgaaggctccatcct
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11489 37 -     16345 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccatcct
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17374 37 +     22201 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccatcct
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415595 37 -  22158432 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccatcct
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27772 37 -     54323 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccatcct
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Octodon_degus.JH651603.1                                11056767 36 -  11899542 aa--a-ag-g----gaata---------atccca-ttaaaaagggctccatcct
i Octodon_degus.JH651603.1                               C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  789 37 +      1339 at-aa-gg-g----tacta---------aacCCA-TTCATGAAGggtccaccct
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1475959 37 - 189151597 at-aa-gg-g----tacta---------aacCCA-TTCATGAAGgttccaccct
i Pan_troglodytes.CM009242.2                             I 161 I 32
s Papio_anubis.CM001495.2                                   245220 37 - 183742232 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11505 37 +     21308 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294248 37 -  20919399 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24145 37 -     27687 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     824 37 +     10553 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   784 37 -     10386 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3485 46 +      9367 gc-aa-gg-a----cagtatgggatgggattata-tccaaaaggacttggtcct
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33640 36 -     56120 ga--a-gg-g----cacta---------attctg-tggagaaagatcccattct
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                            4468 37 +     55023 at-aa-gg-g----cacta---------aaccca-ttcatggaggctccaccct
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         3990 37 -     89929 at-aa-gg-g----cacta---------aaccca-ttcatggaggctccaccct
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4580 37 +     40849 at-aa-gg-g----cacta---------aaccca-ttcatggaggctccaccct
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256310 37 +  14605196 at-aa-gg-g----cacta---------aacCCA-TTCATggaggctccaccct
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66371 36 +    207309 at-aa-gg-g----cacta---------aaccca-t-catgaaggctccaccct
i Pithecia_albicans.k141_1239476                         I 1 C 0
s Pithecia_chrysocephala.k141_785207                          7459 36 -     25401 at-aa-gg-g----cacta---------aaccca-t-cgtgaaggctccaccct
i Pithecia_chrysocephala.k141_785207                     I 1 C 0
s Pithecia_hirsuta.k141_640380                               33207 36 +     58159 at-aa-gg-g----cacta---------aaccca-t-catgaaggctccaccct
i Pithecia_hirsuta.k141_640380                           I 1 C 0
s Pithecia_mittermeieri.k141_1280039                         33483 36 +     63561 at-aa-gg-g----cacta---------agccca-t-catgaaggctccaccct
i Pithecia_mittermeieri.k141_1280039                     I 1 C 0
s Pithecia_pissinattii.k141_878371                           33243 36 +     51148 at-aa-gg-g----cacta---------aaccca-t-catgaaggctccaccct
i Pithecia_pissinattii.k141_878371                       I 1 C 0
s Pithecia_pithecia.tarseq_165                              558213 36 -   4542175 at-aa-gg-g----cacta---------aaccca-t-cgtgaaggctccaccct
i Pithecia_pithecia.tarseq_165                           I 1 C 0
s Pithecia_vanzolinii.k141_1369553                           33227 36 +     51125 at-aa-gg-g----cacta---------agccca-t-catgaaggctccaccct
i Pithecia_vanzolinii.k141_1369553                       I 1 C 0
s Plecturocebus_bernhardi.k141_2549090                        9644 36 +     39866 gt-aa-gg-g----cacta---------aaccca-t-catgaaggctccaccct
i Plecturocebus_bernhardi.k141_2549090                   I 1 C 0
s Plecturocebus_brunneus.k141_862875                          4726 36 -      9282 gt-aa-gg-g----cacta---------aaccca-t-catgaaggctccaccct
i Plecturocebus_brunneus.k141_862875                     I 1 C 0
s Plecturocebus_caligatus.k141_1382851                       44130 36 -     87950 gt-aa-gg-g----cacta---------aaccca-t-catgaaggctccaccct
i Plecturocebus_caligatus.k141_1382851                   I 1 C 0
s Plecturocebus_cinerascens.k141_1164729                     44524 36 -     88961 gt-aa-gg-g----cacta---------aaccca-t-catgaaggctccaccct
i Plecturocebus_cinerascens.k141_1164729                 I 1 C 0
s Plecturocebus_cupreus.k141_2351393                          9222 36 -     39403 gt-aa-gg-g----cacta---------aaccca-t-catgaaggctccaccct
i Plecturocebus_cupreus.k141_2351393                     I 1 C 0
s Plecturocebus_dubius.k141_1058799                          44173 36 +     87928 gt-aa-gg-g----cacta---------aaccca-t-catgaaggctccaccct
i Plecturocebus_dubius.k141_1058799                      I 1 C 0
s Plecturocebus_grovesi.k141_2013005                          9221 36 -     60166 gt-aa-gg-a----cacta---------aaccca-t-catgaaggctccaccct
i Plecturocebus_grovesi.k141_2013005                     I 1 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16158 36 -     67232 gt-aa-gg-g----cacta---------aaccca-t-catgaaggctccaccct
i Plecturocebus_hoffmannsi.k141_3303950                  I 1 C 0
s Plecturocebus_miltoni.k141_349282                          44074 36 -     90634 gt-aa-gg-g----cacta---------aaccca-t-catgaaggctccaccct
i Plecturocebus_miltoni.k141_349282                      I 1 C 0
s Plecturocebus_moloch.k141_1031110                          45541 36 +     89403 gt-aa-gg-a----cacta---------aaccca-t-catgaaggctccaccct
i Plecturocebus_moloch.k141_1031110                      I 1 C 0
s Pongo_abelii.CM009266.2                                   181148 37 - 189387572 at-aa-gg-g----tacta---------aaccca-ttcatgaaggctgcaccct
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195888 37 -   9816681 at-aa-gg-g----tacta---------aaccca-ttcatgaaggctgcaccct
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29668 37 +     69807 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46849 37 -     80239 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984247 37 +   4620579 TT-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Prolemur_simus.MPIZ01000396.1                          I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567742 37 -   2598838 Tt-at-gg-g----cacta---------atccca-ttcacgagggctccatcct
i Propithecus_coquerelli.NW_012148875.1                  I 1 C 0
s Propithecus_coronatus.k141_209299                           5380 37 -      7103 tt-at-gg-g----cacta---------atccca-ttcacgagggctccatcct
i Propithecus_coronatus.k141_209299                      I 1 C 0
s Propithecus_diadema.k141_153680                             5977 37 -     11706 tt-at-gg-g----cacta---------atccca-ttcacgagggctccatcct
i Propithecus_diadema.k141_153680                        I 1 C 0
s Propithecus_edwardsi.k141_635656                            9714 37 -     30655 tt-at-gg-g----cacta---------atccca-ttcacgagggctccatcct
i Propithecus_edwardsi.k141_635656                       I 1 C 0
s Propithecus_perrieri.k141_1496898                          36028 37 +     46564 tt-at-gg-g----cacta---------atccca-ttcacgagggctccatcct
i Propithecus_perrieri.k141_1496898                      I 1 C 0
s Propithecus_tattersalli.k141_1127767                       96307 37 -     98465 tt-at-gg-g----cacta---------atccca-ttcacgagggctccatcct
i Propithecus_tattersalli.k141_1127767                   I 1 C 0
s Propithecus_verreauxi.k141_1047036                          9946 37 +     35169 tt-at-gg-g----cacta---------atccca-ttcacgagggctccatcct
i Propithecus_verreauxi.k141_1047036                     I 1 C 0
s Pygathrix_cinerea.k141_1153803                             29035 37 +     91421 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155587 37 -   7812017 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9892 37 +     72585 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3499 37 +      7119 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124169 37 + 195417433 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccatcct
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238341 37 -   7961872 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_161125                                8801 37 +     12412 at-aa-gg-g----cacta---------aacccgtt-catgaagacttcaccct
i Saguinus_bicolor.k141_161125                           N 0 C 0
s Saguinus_geoffroyi.k141_356064                               262 37 +      9876 at-aa-gg-g----cacta---------aacccgtt-catgaagccttcaccct
i Saguinus_geoffroyi.k141_356064                         N 0 C 0
s Saguinus_imperator.k141_2710097                            15865 37 -     24931 at-aa-gg-g----cacta---------aacccgtt-catgaagccttcaccct
i Saguinus_imperator.k141_2710097                        N 0 C 0
s Saguinus_inustus.k141_4502137                                745 37 +      4564 at-aa-gg-g----cacta---------aacccgtt-catgaagccttcaccct
i Saguinus_inustus.k141_4502137                          N 0 C 0
s Saguinus_labiatus.k141_264497                               3550 37 -      7443 at-aa-gg-g----cacta---------aacccatt-catgaagcctttaccct
i Saguinus_labiatus.k141_264497                          N 0 C 0
s Saguinus_midas.LG03                                       394456 37 - 209938924 at-aa-gg-g----cacta---------aacccgtt-catgaaggcttcaccct
i Saguinus_midas.LG03                                    I 849 C 0
s Saguinus_mystax.k141_6319370                                1165 37 +     10149 at-aa-gg-g----cacta---------aacccatt-catgaagcctttaccct
i Saguinus_mystax.k141_6319370                           N 0 C 0
s Saguinus_oedipus.k141_1368863                                505 37 +     10417 at-aa-gg-g----cacta---------aacccgtt-catgaagccttcaccct
i Saguinus_oedipus.k141_1368863                          N 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110624 41 + 121099817 at-aa-gg-gcactcacta---------aacccatt-catgaaggctccaccct
i Saimiri_boliviensis.NW_024100920.1                     I 1 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32191 41 -     47369 at-aa-gg-gcactcacta---------aacccatt-catgaaggctccaccct
i Saimiri_cassiquiarensis.k141_1467335                   I 1 C 0
s Saimiri_macrodon.k141_1173117                              32577 41 -     79414 at-aa-gg-gcactcacta---------aacccatt-catgaaggctccaccct
i Saimiri_macrodon.k141_1173117                          I 1 C 0
s Saimiri_oerstedii.k141_245838                              29268 41 -     34454 at-aa-gg-gcactcacta---------aacccatt-catgaaggctccaccct
i Saimiri_oerstedii.k141_245838                          I 1 C 0
s Saimiri_sciureus.k141_1467173                              16669 41 -     22428 at-aa-gg-gcactcacta---------aacccatt-catgaaggctccaccct
i Saimiri_sciureus.k141_1467173                          I 1 C 0
s Saimiri_ustus.k141_360372                                  31823 41 -     47109 at-aa-gg-gcactcacta---------aacccatt-catgaaggctccaccct
i Saimiri_ustus.k141_360372                              I 1 C 0
s Sapajus_apella.ctg103                                     239857 37 +   5703754 at-aa-gg-g----cacta---------aacccatt-catgaaggctccacact
i Sapajus_apella.ctg103                                  I 3 C 0
s Sapajus_macrocephalus.k141_796559                           9447 37 +     21866 at-aa-gg-g----cacta---------aacccatt-catgaaggctccacact
i Sapajus_macrocephalus.k141_796559                      I 3 C 0
s Semnopithecus_entellus.k141_583282                           474 37 +     11297 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30867 37 +     58920 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17365 37 -     45317 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25023 37 -     42441 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27699 37 -     29113 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30776 37 -     48123 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1870018 37 +   3870691 at-aa-gg-g----cagca---------attctg-tttacaaggactccaccct
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       392860 37 +   1523678 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccatcct
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2300 36 +      9917 at-aa-gg-g----ctcta---------gttcca-ctcac-acggctgcacctt
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9098 36 +     20590 at-aa-gg-g----ctcta---------gttcca-ctcac-acggctgcacctt
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355029 37 - 186847797 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25857 36 -     33621 aa--a-gg-g----catta---------attcca-ctgagcatgactccattct
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22777 37 +     26378 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35576 37 -     78344 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22102 37 +     25722 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30532 37 -     62838 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30521 37 +     46913 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11260 37 -     28527 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32467 37 -     64340 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30505 37 -     63452 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11952 37 +     22490 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5318 37 -      6147 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12231 37 -     13050 at-ga-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257395 37 -   6242583 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3491 37 +     19340 at-aa-gg-g----cacta---------aaccca-ttcatgaaggctccaccct
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1836996 37 -   4065304 at-aa-ga-g----catta---------atttca-tttgtgaggactccatgtt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      11027 37 -     70247 at-aa-ga-g----catta---------atttca-tttgtgaggactccatgtt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  26897 37 -     30710 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Varecia_rubra.k141_787544                              I 1 C 0
s Varecia_variegata.k141_289850                              25804 37 -    147434 tt-at-gg-g----cacta---------atccca-ttcactagggctccatcct
i Varecia_variegata.k141_289850                          I 1 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175777 37 -    224448 at-aa-gg-g----cagta---------attcca-tttagagggactccacctt
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156  0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380  0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524  0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699  0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316  3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992  0 +  89631738 C
e Mus_musculus.chr8                                       41689686  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513  0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334  0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274  0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700  0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8866 32 +     36723 tat--gacctggtca-cctcctagaga-cccc----ac---ct
s Allenopithecus_nigroviridis.k141_3755588                   49816 32 +     53615 cat--gacctagcta-cctcctgaaaa-cccc----ac---ct
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1843 32 +     13857 cat--gtcctagtta-cctcctgaaaa-cccc----ac---ct
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18398 32 -     21945 cat--gtcctagtta-cctcctgaaaa-cccc----ac---ct
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20083 32 +     32033 cat--gtcctagtta-cctcctgaaaa-cccc----ac---ct
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73850 32 -     84148 cat--gactaagtca-cctcctaaaga-ctgc----ac---ct
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46088 32 -     78289 cat--gactaagtca-cctcctaaaga-ctgc----ac---ct
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45528 35 +     55831 cat--gactaagtca-cctcctaaaga-ctgc----acgcact
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                43978 32 -     64179 cat--gactaagtca-cctcctaaaga-ctgc----ac---ct
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1086 32 -      3959 cat--gactaagtca-cctcctaaaga-ctgc----tc---ct
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42603 32 +     45454 cat--gactaagtca-cctcctaaaga-ctgt----ac---ct
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48252 32 +     70886 cat--gactaagtca-cctcctaaaga-ctgc----ac---ct
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10425 32 +     30854 cat--gactaagtca-cctcctaaaga-ctgc----ac---ct
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34559 32 +     42133 cat--gactaagtca-cctcctaaaga-ctgc----ac---ct
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2792 32 +     17741 tat--gacttagtca-cctcctaaaga-atgc----ac---ct
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3417 32 -     15923 tat--gacttagtca-cctcctaaaga-atgc----ac---ct
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673699 32 +   5030052 tat--gacttagtca-cctcctaaaga-atgc----ac---ct
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3693 32 -     16391 tat--gacttagtca-cctcctaaaga-atgc----ac---ct
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3252 32 -     17186 tat--gacttagtca-cctcctaaaga-atgc----ac---ct
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25572 32 -     32367 tat--gacccactca-ccttccaaagg-cccc----ag---gt
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 93
s Ateles_geoffroyi_b.tarseq_1536                               276315 32 +  21539123 cat--gacttagtca-cctcctaaaga-ctgc----ac---ct
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12481 32 +     48076 cat--gatttagtca-cctcctaaaga-ctgc----ac---ct
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7616 32 -     28759 cat--gatttagtca-cctccgaaaga-ctgc----ac---ct
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35172 32 +     44353 cat--gacttagtca-cctcctaaaga-ctgc----ac---ct
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50541 32 -     71267 cat--gatttagtca-cctccgaaaga-ctgc----ac---ct
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24599 32 -     33135 cat--gatttagtca-cctcctaaaga-ctgc----ac---ct
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7885 24 +     11645 cat--gatctagtca-cct---------cccc----ac---ct
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7893 24 -     19611 cat--gatctagtca-cct---------cccc----ac---ct
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9405 32 +     28062 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44699 32 -     91139 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22225 32 +     95584 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22138 32 +    119600 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11792 30 +     18648 -at--gacttagtca-cctcctaaag--ctgc----ac---tt
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11304 31 -     13885 -at--gacttagtca-cctcctaaaga-ctgc----ac---tt
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3397 31 -      8861 -at--gacttagtca-cctcctaaaga-ctgc----ac---tt
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455786 31 + 189096842 -at--gacttagtca-cctcctaaaga-ctgc----ac---tt
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3308 31 +      8664 -at--gacttagtca-cctcctaaaga-ctgc----ac---tt
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1120 31 -      1607 cct--aacctgggca-cctcccaaa-g-ttcc----ac---ct
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272424 32 +    496798 tgt--ggcctagtca-ccgcccccaaa-cctt----gc---ct
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29305 32 -     39886 cat--gaccaaggca-ctttccaaagt-ttcc----ac---tt
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4998008 32 +  23392119 NNN--NNNNNNNNNN-NNNNNNNNNNN-NNNN----NN---NN
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001450 32 +  23407841 cat--aacccagtca-cccctcaaagg-ctac----ac---ct
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64529 32 -     66877 cat--aacccagtca-cccctcaaagg-ctac----ac---ct
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6707 31 -     12580 -gt--gacttagtca-cctcctaaaga-ctgc----ac---tt
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44765 31 +     53515 -at--gacttagtca-cctcctaaaga-ctgc----ac---tt
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374517 32 -  26074798 tat--gacttagtca-cctcctaaaga-ctgc----ac---ct
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9574 32 -     34880 tat--gacttagtca-cctcctaaaga-ctgc----ac---ct
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68670 32 -     89041 tat--gacttagtca-cctcctaaaga-ctgc----ac---ct
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4383 32 -      5494 tgt--ggcctagtca-cctcccccaaa-cctt----gc---ct
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                142898 32 -   4669795 cat--gacctagtca-cctcctGAAGA-CCCC----AC---CT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46637 32 +     47900 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2070 32 -     14410 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46452 32 -    148725 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28730 32 -     40656 cat--gacctagtta-cctcctgaaaa-cccc----ac---ct
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8689 32 +     20796 cat--gacctagtta-cctcctgaaaa-cccc----ac---ct
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13803 32 -     17524 cat--gacctagtta-cctcctgaaaa-ccca----ac---ct
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29535 32 -     34525 cat--gacctagtta-cctcctgaaaa-cccc----ac---ct
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13315 32 -     25376 cat--gacctagtta-cctcctgaaaa-cccc----ac---ct
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365902 32 -  39242232 cat--gacctagtta-cctcctgaaaa-cccc----ac---ct
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271629 32 +  21565898 cat--gacctagtta-ccgcctgaaaa-cccc----ac---ct
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        33994 32 -     45857 cat--gacctagtta-cctcctgaaaa-cccc----ac---ct
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28895 32 -     32606 cat--gacctagtta-cctcctgaaaa-cccc----ac---ct
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5058 32 +      8499 cat--gacctagtta-cctcctgaaaa-cccc----ac---ct
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27456 32 +     70610 cat--gacctagtta-cctcctgaaaa-cccc----ac---ct
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24417 32 +     36323 cat--gacctagtta-cctcctgaaaa-cccc----ac---ct
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32292 24 -     33796 tat--gacctagtca-cca---------gccc----ac---ct
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6795 24 -     15404 cat--gacctagtca-cct---------cccc----ac---ct
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10511 32 -     32913 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20924 32 -     40346 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21179 32 +    216457 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           20968 32 +     39636 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240350 32 -   2543920 cac--agcctggtct-cctaccaaggg-ctcc----ac---ct
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1091259                          32942 32 -     52013 tac--gactcagtca-ccttctagaga-ctgc----ac---ct
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44039 32 -    112038 cat--gccttagtca-cctcctaaaga-ccgc----gc---ct
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9590 32 +     34062 cat--gccttagtcg-cctcctaaaga-ccgc----gc---ct
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345318 32 +  18827391 cat--gtcctagtta-cctcctgaaaa-cccc----ac---ct
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11857 32 -     44032 cat--gtcctagtta-cctcctgaaaa-cccc----ac---ct
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306703 32 - 135778131 cat--gtcctagtta-cctcctgaaaa-cccc----ac---ct
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411116 32 -   2368649 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      380998 32 - 200372422 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4555 32 -     84244 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    647017 32 -   1526836 cat--gacctcatgg-ccttctgaagg-tttc----ct---ct
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20194 31 +     50838 cct--aacctggtcc-cctcccaaa-g-ctcc----ac---ct
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   8706 32 +     36344 cat--aacccagtca-cctcccaaagg-ttat----at---at
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29717 32 +     75252 cag--aacccagtca-ccctccaaagg-caac----ac---ct
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294192 32 +  12879189 tgt--gacctagtcg-cttcccaaagg-cccc----ac---ct
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100424 32 -    115145 tat--agcctgatct-cctcccaaagg-ctct----ac---ct
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952186 27 -  37912305 cct--gactta-----c-ctccaaatt-tccc----tc---at
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   7099 27 -     10735 cct--gactta-----c-ctccaaatt-tccc----cc---at
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10803 32 +     14636 cat--aacccagtca-cccctcaaagg-ccac----ac---ct
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Erythrocebus_patas.Contig38                               264845 32 +  21539334 cat--gtcctagtta-cctcctgaaaa-cccc----ac---ct
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16411 32 -     24895 cat--gacctagtca-cctcctgaagg-cccc----ac---ct
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               44120 32 -     70999 cat--gacctagtca-cctcctgaagg-cccc----ac---ct
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              88091 32 +    112731 cat--gacctagtca-cctcctgaagg-cccc----ac---ct
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44654 32 +     68309 cat--gacctagtca-cctcctgaagg-cccc----ac---ct
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 54978 32 -     65740 cat--gacctagtca-cctcctgaagg-cccc----ac---ct
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25610 32 -     75513 cat--gacctagtca-cctcctgaagg-cccc----ac---ct
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49805 32 -     97555 cat--gacctagtca-cctcctgaagg-cccc----ac---ct
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6529 32 +     30972 cat--gacctcgtca-cctcctgaagg-cccc----ac---ct
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44248 32 -     52037 cat--gacctagtca-cctcctgaagg-cccc----ac---ct
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60652 32 -    111500 cat--gacctagtca-cctcctgaagg-cccc----ac---ct
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923760 32 -   3816255 cat--aacctagtca-cctctgaaagg-ctcc----ac---ct
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2795 32 -     28519 cat--gaattagtca-cttcccaaagg-cccc----ac---ct
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            2930 29 -      6791 c----gacctaacca-cctcccaagg--ccct----gc---ct
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3586045                              19608 32 -     19819 tat--gacctagtca-cctcctagaga-cccc----ac---ct
i Gorilla_beringei.k141_3586045                          C 0 C 0
s Gorilla_gorilla.LT578336.1                                 74525 32 +  33314783 tat--gacctagtca-cctcctagaga-cccc----ac---ct
i Gorilla_gorilla.LT578336.1                             C 0 I 188
s Graphiurus_murinus.GraMur_scaffold_71094                     357 31 +     16254 c--aagacctaatca-cctcccatag--ccct----tc---tt
i Graphiurus_murinus.GraMur_scaffold_71094               I 55 n 29
s Hapalemur_alaotrensis.k141_330369                          16339 32 -     40692 cat--gacctagtca-cctcccaaagg-cacc----ac---ct
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37738 32 +     49394 cat--gacctagtca-cctcccaaagg-cacc----ac---ct
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62609 32 -     66874 cat--gacctagtca-cctcccaaagg-cacc----ac---ct
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11480 32 -     42923 cat--gacctagtca-cctcccaaagg-cacc----ac---ct
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18482 32 -     53142 cat--gacctagtca-cctcccaaagg-cacc----ac---ct
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934141 32 -  22651954 cat--aaccttgtta-gcccccaaagg-ctcc----ac---gt
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    144499 32 -    630532 cat--gacctagtca-cctcctaaaga-cccc----ac---ct
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73395 32 +    143317 cat--aacccagtca-cccctcaaagg-ctac----ac---ct
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7530 32 +     12352 cat--gacatagtca-cctcctaaaga-cccc----ac---ct
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14715 32 +     55766 cat--gacatagtca-cctcctaaaga-cccc----ac---ct
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054245 32 + 191637585 cat--gacatagtca-ccttctaaaga-cccc----ac---ct
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803123 32 +  11177569 cat--gacatagtca-ccttctaaaga-cccc----ac---ct
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9307 32 -    135385 cat--aacccagtaa-cctcccaaagg-ctcc----ac---ct
i Hystrix_cristata.HysCri_scaffold_5660                  I 557 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388477 36 +   7955117 cat--gacctactca-catcctgaaga-ccctactcat---ct
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 2
s Indri_indri.k141_2415743                                    4027 24 +     11955 cag--gatctagtca-cct---------cccc----ac---ct
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44866 32 +    110728 cat--gacttagtca-cctcctaaaga-ctgc----ac---ct
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14761136 32 +  30322482 cat--gacctagtca-cctcccaaagg-cacc----ac---ct
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                         347 32 -     23187 tat--gactcagtca-cctcctgaaga-ctgc----ac---ct
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            660 32 -     14280 tat--gactcagtca-cctcctaaaga-ctgc----ac---ct
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         303 32 +      3713 tat--gactcagtca-cctcctaaaga-ctgc----ac---ct
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      495 31 +      8855 -at--gacttagtca-cctcctaaaga-ctgc----ac---tt
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5297 31 -     13645 -at--gacttagtca-cctcctaaaga-ctgc----ac---tt
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10652 24 +     29618 cat--gatctagtca-ctt---------cccc----ac---ct
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10648 24 +     31569 cat--gatctagtca-ctt---------cccc----ac---ct
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10658 24 +     24756 cat--gatctagtca-ctt---------cccc----ac---ct
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10658 24 +     16388 cat--gatctagtca-ctt---------cccc----ac---ct
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               335780 32 -   1826925 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47172 32 -     61512 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374834 32 -  60120075 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27102 32 +     30207 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1940 32 -      5035 cat--gaactagtca-cctcctgaaga-cccc----ac---ct
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27055 32 +     30527 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38231 32 -     50087 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  47976 32 +     51645 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417178 32 - 187317192 cat--gacctagtca-cctcctGAAGA-CCCC----AC---CT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401409 32 +  25927173 cat--gacctagtca-cctcctGAAGA-CCCT----AC---CT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50580 32 -     62418 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3111 32 +     14901 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47053 32 +     59329 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272960 32 +    668171 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1592 32 -      5049 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4758 32 +     17132 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324248 32 +  24302211 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359079 32 -    752769 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502690 36 +  40650429 cat--gacctactca-catcccaaaga-ccctactcat---ct
i Marmota_marmota.CZRN01000018.1                         C 0 I 2
s Mico_argentatus.k141_582562                                11890 31 +     17804 -at--aacttagtca-cctcctaaaga-ctgc----ac---tt
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12390 31 -     12984 -at--gacttagtca-cctcctaaaga-ctgc----ac---tt
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20709 31 -     26561 -at--gacttagtca-cctcctaaaga-ctgc----ac---tt
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986490 24 +  93316391 cat--gacctagtca-cct---------cccc----aC---TT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24346 32 -     27822 cat--gacctagtta-cctcctgaaaa-cccc----ac---ct
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54265 24 -     62432 cat--gacctagtca-cct---------cccc----ac---ct
i Mirza_zaza.k141_766280                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               1004 29 -    124358 t----gacctaacca-cctcctaaag--cccc----ac---ct
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64708 31 +     67721 cct--aacctgatca-ccccgcaaa-g-gtcc----ac---ct
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              31123 32 +     34575 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55417 32 -    132029 cat--gacctagtca-cctcctaaaga-cccc----ac---ct
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11526 32 -     16345 cat--gacctagtca-cctcctaaaga-cccc----ac---ct
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17411 32 +     22201 cat--gacctagtca-cctcctaaaga-cccc----ac---ct
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415632 32 -  22158432 cat--gacctagtca-cctcctaaaga-cccc----ac---ct
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27809 32 -     54323 cat--gacctagtca-cctcctaaaga-cccc----ac---ct
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Octodon_degus.JH651603.1                                11056803 31 -  11899542 cca--aacctggtca-cctcccaaa-t-ctcc----ac---ct
i Octodon_degus.JH651603.1                               C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  826 33 +      1339 tat--gacctagtCA-CCTCCTAGAGACCCCC----AC---CT
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.KZ622849.1                                 36765 33 -    110857 tat--gacctagtCA-CCTCCTAGAGACCCCC----AC---CT
i Pan_troglodytes.KZ622849.1                             I 49 I 66
s Papio_anubis.CM001495.2                                   245257 32 - 183742232 cat--gacctagtca-cctcctGAAGA-CCCC----AC---CT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11542 32 +     21308 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294285 32 -  20919399 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24182 32 -     27687 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     861 32 +     10553 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   821 32 -     10386 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3531 26 +      9367 cct--tattt------t-ctccaaatt-tctc----cc---ct
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33676 33 -     56120 cat--aacctagacagcctcccaaagg-cttc----at---ct
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                            4505 32 +     55023 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4027 32 -     89929 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4617 32 +     40849 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256347 32 +  14605196 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66407 32 +    207309 cat--gccttagtca-cctcctaagga-ccgc----ac---ct
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7495 32 -     25401 cat--gccttagtca-cctcctaagga-ccgc----ac---ct
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33243 32 +     58159 cat--gccttagtca-cctcctaagga-ccac----ac---ct
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33519 32 +     63561 cat--gccttagtca-cctcctaagga-ccgc----ac---ct
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33279 32 +     51148 cat--gccttagtca-cctcctaagga-ccgc----ac---ct
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558249 32 -   4542175 cat--gccttagtca-cctcctaagga-ccgc----ac---ct
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33263 32 +     51125 cat--gccttagtca-cctcctaagga-ccgc----ac---ct
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9680 32 +     39866 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4762 32 -      9282 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44166 32 -     87950 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44560 32 -     88961 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9258 32 -     39403 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44209 32 +     87928 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9257 32 -     60166 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16194 32 -     67232 cat--gccttagtca-cctcctaaaga-ccac----ac---ct
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44110 32 -     90634 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45577 32 +     89403 cat--gccttagtca-cctcctaaaga-ccgc----ac---ct
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181185 32 - 189387572 cat--gacctagtca-cctcctagaga-cccc----ac---ct
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195925 32 -   9816681 cat--gacctagtca-cctcctagaga-cccc----ac---ct
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29705 32 +     69807 cac--gacctagtca-cctcctgaaga-cccc----ac---ct
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46886 32 -     80239 cac--gacatagtca-cctcctgaaga-cccc----ac---ct
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984284 32 +   4620579 cat--gacctagtca-cctcccaaagg-cacc----ac---ct
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567779 24 -   2598838 cat--gatcTAGTCA-CCT---------CCCC----AC---CT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5417 24 -      7103 cat--gatctagtca-cct---------cccc----ac---ct
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             6014 24 -     11706 cat--gatctagtca-cct---------cccc----ac---ct
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9751 24 -     30655 cat--gatctagtca-cct---------cccc----ac---ct
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          36065 24 +     46564 cat--gatctagtca-cct---------cccc----ac---ct
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96344 24 -     98465 cat--gatctagtca-cct---------cccc----ac---ct
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                          9983 24 +     35169 cat--gatctagtca-cct---------cccc----ac---ct
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29072 32 +     91421 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155624 32 -   7812017 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9929 32 +     72585 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3536 32 +      7119 cat--gacctaggca-cctcctgaaga-cccc----ac---ct
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124206 32 + 195417433 cat--gacctaggCA-CCTCCTGAAGA-CCCC----AC---CT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238378 32 -   7961872 cat--gacctaggca-cctcctgaaga-cccc----ac---ct
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_161125                                8838 32 +     12412 tac--gactcagtca-ccttctagaga-ctgc----ac---ct
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               299 32 +      9876 tat--gactcagtca-cctcctaaaga-ctgc----ac---ct
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            15902 32 -     24931 tat--gactcagtca-cctcctagaga-ctgc----ac---ct
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                                782 32 +      4564 tat--gactcagtca-gctcctagaga-ctgc----ac---ct
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3587 32 -      7443 tat--gactcagtca-gctcctagaga-ctgc----ac---ct
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394493 32 - 209938924 tat--gactcagtca-ccttctagaga-ctgc----ac---ct
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1202 32 +     10149 tat--gactcagtca-gctcctagaga-ctgc----ac---ct
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                542 32 +     10417 tat--gactcagtca-cctcctaaaga-ctgc----ac---ct
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110665 32 + 121099817 tAT--GACTTAGTCA-CCTCCTAAAGA-CTGC----AC---CT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32232 32 -     47369 tat--gacttagtca-cctcctaaaga-ctgc----ac---ct
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32618 32 -     79414 tat--gacttagtca-cctcctaaaga-ctgc----ac---ct
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29309 32 -     34454 tat--gacttagtca-cctcctaaaga-ctgc----ac---ct
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16710 32 -     22428 tat--gacttagtca-cctcctaaaga-ctgc----ac---ct
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31864 32 -     47109 tat--gacttagtca-cctcctaaaga-ctgc----ac---ct
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239894 32 +   5703754 tat--gacttagtca-cctcctaaaga-ctgc----ac---ct
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9484 32 +     21866 tat--gacttagtca-cctcctaaaga-ctgc----ac---ct
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                           511 32 +     11297 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30904 32 +     58920 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17402 32 -     45317 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25060 32 -     42441 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27736 32 -     29113 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30813 32 -     48123 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1870055 36 +   3870691 cat--gacctactca-catcctgaaga-ccctactcat---ct
i Spermophilus_dauricus.KZ294078.1                       C 0 I 2
s Symphalangus_syndactylus.tarseq_199                       392897 32 +   1523678 cat--gacctagtca-cctcctaaaga-cccc----ac---ct
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2336 32 +      9917 tgt--ggcctagtca-cctcccaaaaa-cctt----gc---ct
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9134 32 +     20590 tgt--ggcctagtca-cctcccaaaaa-cctt----gc---ct
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355066 32 - 186847797 cat--gacctagtca-cctcctGAAGA-CCCC----AC---CT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25893 32 -     33621 cat--aacctagaccc-ttcccaaagg-ctcc----ac---ct
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22814 32 +     26378 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35613 32 -     78344 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22139 32 +     25722 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30569 32 -     62838 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30558 32 +     46913 cgt--gacctagtca-cctcctgaaga-cccc----ac---ct
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11297 32 -     28527 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32504 32 -     64340 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30542 32 -     63452 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    11989 32 +     22490 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5355 32 -      6147 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12268 32 -     13050 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257432 32 -   6242583 cat--gacctagtca-cctcctgaaga-cccc----ac---ct
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3528 32 +     19340 cgt--gacctagtca-cctcctgaaga-cccc----ac---ct
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1837033 32 -   4065304 cct--gacctagtaa-cttctaaaaga-actt----at---tc
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      11064 32 -     70247 cat--gacctagtaa-cttccaaaaga-actt----at---tc
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  26934 32 -     30710 cat--gacctagtca-cctcccacagg-cacc----ac---ct
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25841 32 -    147434 cat--gacctagtca-cctcccacagg-cacc----ac---ct
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175814 32 -    224448 cat--gacctattca-catcccaaagc-cccc----ac---ct
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 2
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156  0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380  0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524  0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699  0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316  3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992  0 +  89631738 C
e Mus_musculus.chr8                                       41689686  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513  0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334  0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274  0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700  0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8898 29 +     36723 c----ttaatg-ttattgcattg-gga-attaggtt
s Allenopithecus_nigroviridis.k141_3755588                   49848 29 +     53615 c----ttcata-ttattgcattg-gga-attaggtt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1875 29 +     13857 c----ttcata-ttattgcattg-gga-attaggtt
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18430 29 -     21945 c----ttcata-ttattgcattg-gga-attaggtt
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20115 29 +     32033 c----ttcata-ttattgcattg-gga-attaggtt
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73882 29 -     84148 c----ttaata-ttattgcattg-gga-attaggtt
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46120 29 -     78289 c----ttaata-ttattgcattg-gga-attaggtt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45563 29 +     55831 c----ttaata-ttattgcattg-gga-attaggtt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44010 29 -     64179 c----ttaata-ttattgcattg-gga-attaggtt
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1118 29 -      3959 c----ttaata-ttattgcattg-gga-attaggtt
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42635 29 +     45454 c----ttaata-ttattgcattg-gga-attaggtt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48284 29 +     70886 c----ttaata-ttattgcattg-gga-attaggtt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10457 29 +     30854 c----ttaata-ttattgcattg-gga-attaggtt
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34591 29 +     42133 c----ttaata-ttattgcattg-gga-attaggtt
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2824 29 +     17741 c----ttaata-ttattgtattg-gga-attaggtt
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3449 29 -     15923 c----ttaata-ttattgtattg-gga-attaggtt
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673731 29 +   5030052 c----ttaata-ttattgtattg-gga-attaggtt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3725 29 -     16391 c----ttaata-ttattgtattg-gga-attaggtt
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3284 29 -     17186 c----ttaata-ttattgtattg-gga-attaggtt
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25697 29 -     32367 c----tttgta-ttattgccttg-ggg-attacatt
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 93 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276347 29 +  21539123 c----ttaatg-ttattgcattg-gga-attaggtt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12513 29 +     48076 c----ttaatg-ttattgcattg-gga-attaggtt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7648 29 -     28759 c----ttaatg-ttattgcattg-gga-attaggtt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35204 29 +     44353 c----ttaatg-ttattgcattg-gga-attaggtt
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50573 29 -     71267 c----ttaatg-ttattgcattg-gga-attaggtt
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24631 29 -     33135 c----ttaatg-ttattgcattg-gga-attaggtt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7909 28 +     11645 c----ttaaca--tattgcattg-ggg-attaagtt
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7917 28 -     19611 c----ttaaca--tattgcattg-ggg-attaagtt
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9437 29 +     28062 c----ttaata-ttatggcattg-gga-attaggtt
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44731 29 -     91139 c----ttaata-ttatggcattg-gga-attaggtt
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22257 29 +     95584 c----ttaata-ttatggcattg-gga-attaggtt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22170 29 +    119600 c----ttaata-ttatggcattg-gga-attaggtt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11822 29 +     18648 c----ttaatg-ttattgaattg-gga-agtaggtt
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11335 29 -     13885 c----tgaatg-ttattgaattg-gga-agtaggtt
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3428 29 -      8861 c----ttaatg-ttattgaattg-gga-agtaggtt
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455817 29 + 189096842 c----ttaatg-ttattgaattg-gga-agtaggtt
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3339 29 +      8664 c----ttaatg-ttattgaattg-gga-agtaggtt
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1151 29 -      1607 c----tttata-ctgttacctgg-ggg-attacatt
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272456 29 +    496798 t----ttaaca-ttatagcatta-gAA-TTTAGGGT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29337 29 -     39886 c----ttcata-ctattgcactg-aag-gtcaggtt
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4998040 29 +  23392119 N----NNNNNN-NNNNNNNNNNN-NNN-NNNNNNNN
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001482 29 +  23407841 c----cttata-cacttaaatga-gag-attaggtt
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64561 29 -     66877 c----cttata-cacttaaatga-gag-attaggtt
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6738 29 -     12580 c----ttaatg-ttattgaattg-gga-agtaggtt
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44796 29 +     53515 c----ttaatg-ttattgaattg-gga-agtaggtt
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374549 29 -  26074798 c----ttaata-ttattgcattg-gga-attaggtt
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9606 29 -     34880 c----ttaata-ttattgcattg-gga-attaggtt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68702 29 -     89041 c----ttaata-ttattgcattg-gga-attaggtt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4415 29 -      5494 t----ttaaca-ttatagcatta-gag-tttagggt
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                142930 29 -   4669795 C----TTCATA-TTATTGCATTG-GGA-ATTAGGtt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46669 29 +     47900 c----ttcata-ttattgcattg-gga-attaggtt
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2102 29 -     14410 c----ttcata-ttattgcattg-gga-attaggtt
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46484 29 -    148725 c----ttcata-ttattgcattg-gga-attaggtt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28762 29 -     40656 c----ttcata-ttattgcattg-gga-attaggtt
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8721 29 +     20796 c----ttcata-ttattgcattg-gga-attaggtt
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13835 29 -     17524 c----ttcata-ttattgcattg-gga-attaggtt
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29567 29 -     34525 c----ttcata-ttattgcattg-gga-attaggtt
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13347 29 -     25376 c----ttcata-ttattgcattg-gga-attaggtt
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365934 29 -  39242232 c----ttcata-ttattgcattg-gga-attaggtt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271661 29 +  21565898 c----ttcata-ttattgcattg-gga-attaggtt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34026 29 -     45857 c----ttcata-ttattgcattg-gga-attaggtt
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28927 29 -     32606 c----ttcata-ttattgcattg-gga-attaggtt
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5090 29 +      8499 c----ttcatg-ttattgcattg-gga-attaggtt
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27488 29 +     70610 c----ttcata-ttattgcattg-gga-attaggtt
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24449 29 +     36323 c----ttcgta-ttattgcattg-gga-attaggtt
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32316 29 -     33796 c----ttaata-ttattgcattg-ggg-attaagat
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6819 29 -     15404 c----ttaata-ttattgcactg-ggg-attaagat
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10543 29 -     32913 t----ttaata-ttgtggcattg-gga-attcagtt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20956 29 -     40346 t----ttaata-ttgtggcattg-gga-attcagtt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21211 29 +    216457 t----ttaata-ttgtggcattg-gga-attcagtt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21000 29 +     39636 t----ttaata-ttgtggcattg-gga-attcagtt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240382 29 -   2543920 c----tttgta-ctcttacctgg-ggg-attaggtt
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1091259                          32974 29 -     52013 c----ttaatg-ttattgcattg-gga-atcaggtt
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44071 29 -    112038 c----ttaata-ttatggcattg-gga-attaggtt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9622 29 +     34062 c----ttaata-ttatggcattg-gga-attaggtt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345350 29 +  18827391 c----ttcata-ttattgcattg-gga-attaggtt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11889 29 -     44032 c----ttcata-ttattgcattg-gga-attaggtt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306735 29 - 135778131 c----ttcata-ttattgcattg-gga-attaggtt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411148 29 -   2368649 c----ttaata-ttattgcattg-gga-attaggtt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381030 29 - 200372422 c----ttaata-ttattgcattg-gga-attaggtt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4587 29 -     84244 c----ttaata-ttattgcattg-gga-attaggtt
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    647049 30 -   1526836 c----atcttaccttttgtgtgg-ggt-gttaggcc
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20225 29 +     50838 c----tttata-ttcttacgtga-ggg-attacact
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   8738 33 +     36344 tatatattata-ttcttatatgg-ggg-attaggtt
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29749 29 +     75252 c----cttgtt-ctcttacgtgg-gtg-attaggtt
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294224 29 +  12879189 c----ttaata-ttattgcattg-ggg-attaaatt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100456 29 -    115145 c----tttgta-cttttacatgg-cag-attaggtt
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952213 28 -  37912305 c----tttaca-ctat-gcattg-gga-attagatt
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   7126 28 -     10735 c----ttcaca-ctat-tcattg-gga-attagatt
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10835 29 +     14636 c----gttata-tgcttaaatgg-agg-attaggtt
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Erythrocebus_patas.Contig38                               264877 29 +  21539334 c----ttcata-ttattgcattg-gga-attaggtt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16443 29 -     24895 c----ttgata-ttattgcattg-ggg-attaagtt
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               44152 29 -     70999 c----ttgata-ttattgcattg-ggg-attaagtt
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              88123 29 +    112731 c----ttaata-ttattgcattg-ggg-attaagtt
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44686 29 +     68309 c----ttacta-ttattgcattg-ggg-attaagtt
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 55010 29 -     65740 c----ttgata-ttattgcattg-ggg-attaagtt
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25642 29 -     75513 c----ttacta-ttattgcattg-ggg-attaagtt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49837 29 -     97555 c----ttaata-ttattgcattg-ggg-attaagtt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6561 29 +     30972 c----ttaata-ttattgcattg-ggg-attaagtt
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44280 29 -     52037 c----ttgata-ttattgcattg-ggg-attaagtt
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60684 29 -    111500 c----ttgata-ttattgcattg-ggg-attaagtt
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923792 26 -   3816255 -------cata-cttttgcatgg-ggg-attaagtt
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                2827 29 -     28519 c----ttaaca-caattgcagtg-ggt-attaggtt
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 I 249
s Glis_glis.GliGli_scaffold_163929                            2959 29 -      6791 c----tttata-ctagtgcattg-ggg-attaggtt
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3586045                              19640 29 -     19819 c----ttaatg-ttattgcattg-gga-attaggtt
i Gorilla_beringei.k141_3586045                          C 0 I 37
s Gorilla_gorilla.LT578341.1                                258058 29 - 186649187 c----ttaatg-ttattgcattg-gga-attaggtt
i Gorilla_gorilla.LT578341.1                             I 68 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    4030 29 -     78134 c----cttata-ctagtgcattg-ggg-attaggtt
i Graphiurus_murinus.GraMur_scaffold_10447               I 29 C 0
s Hapalemur_alaotrensis.k141_330369                          16371 29 -     40692 c----ttaata-ttattgcattg-ggg-attaagtt
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37770 29 +     49394 c----ttaata-ttattgcattg-ggg-attaagtt
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62641 29 -     66874 c----ttaata-ttattgcattg-ggg-attaagtt
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11512 29 -     42923 c----ttaata-ttattgcagtg-ggg-attaagtt
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18514 29 -     53142 c----ttaata-ttattgcattg-ggg-attaagtt
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934173 29 -  22651954 c----cttgta-cttttacatgg-ggg-attaggtt
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hoolock_leuconedys.ctg274                                    144531 29 -    630532 c----ttaatg-ttatttcattg-gga-attatgtt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73427 29 +    143317 c----cttata-tgcttaaatgg-ggg-attaagtt
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7562 29 +     12352 c----ttaatg-ttatttcattg-gga-attatgtt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14747 29 +     55766 c----ttaatg-ttatttcattg-gga-attatgtt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054277 29 + 191637585 c----ttaatg-ttatttcattg-gga-attatgtt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803155 29 +  11177569 c----ttaatg-ttatttcattg-gga-attatgtt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9339 30 -    135385 c----cttata-ctcttacatgg-gggaattaggtt
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388515 30 +   7955117 c----ttcata-ctattgccttatggt-attatggt
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Indri_indri.k141_2415743                                    4051 28 +     11955 t----ttaata--tattgcactg-ggg-attaagtt
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44898 29 +    110728 c----ttaata-ttattgcattg-gga-attaggtt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14761168 29 +  30322482 c----ttaata-ttattgcactg-ggg-attaagtt
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                         379 29 -     23187 c----ttaatg-ttatttcactg-gga-atcaggtt
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            692 29 -     14280 c----ttaatg-ttatttcactg-gga-atcaggtt
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         335 29 +      3713 c----ctaatg-ttatttcactg-gga-atcaggtt
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      526 29 +      8855 c----ttaatg-ttattgaattg-gga-agtaggtt
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5328 29 -     13645 c----ttaatg-ttattgaattg-gga-agtaggtt
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10676 29 +     29618 g----ttaata-ttattgcattg-ggg-attaagtt
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10672 29 +     31569 c----ttaata-ttattgcattg-ggg-attaagtt
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10682 29 +     24756 c----ttaata-ttattgcattg-ggg-attaagtt
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10682 29 +     16388 c----ttaata-ttattgcattg-ggg-attaagtt
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               335812 29 -   1826925 c----ttcata-ttattgcattg-gga-attaggtt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47204 29 -     61512 c----ttcata-ttattgcattg-gga-attaggtt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374866 29 -  60120075 c----ttaata-ttattgcattg-gga-attaggtt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27134 29 +     30207 c----ttcata-ttattgcattg-gga-attaggtt
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            1972 29 -      5035 c----ttcata-ttattgcattg-gga-attaggtt
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27087 29 +     30527 c----ttcata-ttactgcattg-gga-attaggtt
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38263 29 -     50087 c----ttcata-ttattgcattg-gga-attaggtt
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48008 29 +     51645 c----ttcata-ttattgcattg-gga-attaggtt
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417210 29 - 187317192 C----TTCATA-TTATTGCATTG-GGA-ATTAGGtt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401441 29 +  25927173 C----TTCATA-TTATTGCATTG-GGA-ATTAGGtt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50612 29 -     62418 c----ttcata-ttattgcattg-gga-attaggtt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3143 29 +     14901 c----ttcata-ttagtgcattg-gga-attaggtt
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47085 29 +     59329 c----ttcata-ttattgcattg-gga-attaggtt
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  272992 29 +    668171 c----ttcata-ttattgcattg-gga-attaggtt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1624 29 -      5049 c----ttcata-ttattgcattg-gga-attaggtt
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4790 29 +     17132 c----ttcata-ttattgcattg-gga-attaggtt
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324280 29 +  24302211 c----ttcata-ttattgcattg-gga-attaggtt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359111 29 -    752769 c----ttcata-ttattgcattg-gga-attaggtt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502728 30 +  40650429 c----ttcata-ctattgccttatggt-attatggt
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Mico_argentatus.k141_582562                                11921 29 +     17804 c----ttaatg-ttattgaattg-gga-agtaggtt
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12421 29 -     12984 c----ttaatg-ttattgaattg-gga-agtaggtt
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20740 29 -     26561 c----ttaatg-ttattgaattg-gga-agtaggtt
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986514 29 +  93316391 C----TTAATA-tcattgcattg-ggg-attaagag
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24378 29 -     27822 c----ttcata-ttattgcattg-gga-attaggtt
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54289 29 -     62432 c----ttaata-tcattgcattg-ggg-attaagag
i Mirza_zaza.k141_766280                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               1033 29 -    124358 c----tgtgta-ctagtgcatca-ggg-gttagctt
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64739 29 +     67721 c----tttata-ctcttacctgg-ggg-atgacatt
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Nasalis_larvatus.k141_1350636                              31155 29 +     34575 c----ttaata-ttattgcattg-gga-attaggtt
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55449 29 -    132029 c----ttaatg-ttatttcattg-gga-attatgtt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11558 29 -     16345 c----ttaatg-ttatttcattg-gga-attatgtt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17443 29 +     22201 c----ttaatg-ttatttcattg-gga-attatgtt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415664 29 -  22158432 c----ttaatg-ttatttcattg-gga-attatgtt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27841 29 -     54323 c----ttaatg-ttatttcattg-gga-attatgtt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Octodon_degus.JH651603.1                                11056834 29 -  11899542 c----tttata-ctcttacctga-gag-attaaatt
i Octodon_degus.JH651603.1                               C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  859 29 +      1339 C----TTAATG-TTATTCCATTG-GGA-ATTaggtt
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1476028 29 - 189151597 c----ttaatg-tTATTGCATTG-GGA-ATTaggtt
i Pan_troglodytes.CM009242.2                             I 32 I 110
s Papio_anubis.CM001495.2                                   245289 29 - 183742232 C----TTCATA-TTATTACATTG-GGA-ATTAGGtt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11574 29 +     21308 c----ttcata-ttattacattg-gga-attaggtt
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294317 29 -  20919399 c----ttcata-ttattacattg-gga-attaggtt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24214 29 -     27687 c----ttcata-ttattgcattg-gga-attaggtt
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     893 29 +     10553 c----ttcata-ttattacattg-gga-attaggtt
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   853 29 -     10386 c----ttcata-ttattacattg-gga-attaggtt
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3557 28 +      9367 c----ttctta-ccat-gcatct-gga-gttaggtt
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33709 29 -     56120 c----tgtata-cttttccatgg-ggt-attacgtt
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Piliocolobus_badius.k141_2704958                            4537 29 +     55023 c----ttaata-ttattgcattg-gga-attaggtt
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4059 29 -     89929 c----ttaata-ttattgcattg-gga-attaggtt
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4649 29 +     40849 c----ttaata-ttattgcattg-gga-attaggtt
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256379 29 +  14605196 c----ttaata-ttattgcattg-gga-attaggtt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66439 29 +    207309 c----ttaata-ttatggcattg-gga-attaggtt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7527 29 -     25401 c----ttaata-ttacggcattg-gga-attaggtt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33275 29 +     58159 c----ttaata-ttatggcattg-gga-attaggtt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33551 29 +     63561 c----ttaata-ttatggcattg-gga-attaggtt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33311 29 +     51148 c----ttaata-ttatggcattg-gga-attaggtt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558281 29 -   4542175 c----ttaata-ttacggcattg-gga-attaggtt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33295 29 +     51125 c----ttaata-ttatggcattg-gga-attaggtt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9712 29 +     39866 t----ttaata-ttgtggcattg-gga-attcggct
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4794 29 -      9282 t----ttaata-ttgtggcattg-gga-attcggtt
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44198 29 -     87950 t----ttaata-ttgtggcattg-gga-attcggct
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44592 29 -     88961 t----ttaata-ttgtggcattg-gga-attcggct
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9290 29 -     39403 t----ttaata-ttgtggcattg-gga-attcggct
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44241 29 +     87928 t----ttaata-ttgtggcattg-gga-attcggct
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9289 29 -     60166 t----ttaata-ttgtggcattg-gga-attcggct
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16226 29 -     67232 t----ttaata-ttgtggcattg-gga-attcggct
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44142 29 -     90634 t----ttaata-ttgtggcattg-gga-attcggct
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45609 29 +     89403 t----ttaata-ttgtggcattg-gga-attcggct
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181217 29 - 189387572 c----ttaatg-tTATTGCATTG-GGA-ATTaggtt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195957 29 -   9816681 c----ttaatg-ttattgcattg-gga-attaggtt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29737 29 +     69807 c----ttaata-ttattgcattg-gga-attaggtt
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46918 29 -     80239 c----ttaata-ttattgcattg-gga-attaggtt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984316 29 +   4620579 c----ttaata-ttattgcattg-ggg-attaagtt
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567803 28 -   2598838 C----TTGAca--tattgcattg-ggg-attaagtt
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5441 28 -      7103 c----ttgaca--tattgcattg-ggg-attaagtt
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             6038 28 -     11706 c----ttgaca--tattgcattg-ggg-attaagtt
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9775 28 -     30655 c----ttgaca--tattgcattg-ggg-attaagtt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          36089 28 +     46564 c----ttgaca--tattgcattg-ggg-attaagtt
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96368 28 -     98465 c----ttgaca--tattgcattg-ggg-attaagtt
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                         10007 28 +     35169 c----ttgaca--tattgcactg-ggg-attaagtt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29104 29 +     91421 c----ttaata-ttattgcattg-gga-attaggtt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155656 29 -   7812017 c----ttaata-ttattgcattg-gga-attaggtt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9961 29 +     72585 c----ttaata-ttattgcattg-gga-attaggtt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3568 29 +      7119 c----ttacta-ttattgcattg-gga-attaggtt
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124238 29 + 195417433 C----TTACTA-TTATTGCATTG-GGA-ATTAGGtt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238410 29 -   7961872 c----ttacta-ttattgcattg-gga-attaggtt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_161125                                8870 29 +     12412 c----ttaatg-ttattgcattg-gga-atcaggtt
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               331 29 +      9876 c----ttaatg-ttatttcattg-gga-atcaggtt
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            15934 29 -     24931 c----ttaatg-ttattgcattg-gga-atcaggtt
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                                814 29 +      4564 c----ttaatg-ttattgcattg-gga-atcaggtt
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3619 29 -      7443 c----ttaatg-ttattgcattg-gga-atcaggtt
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394525 29 - 209938924 c----ttaatg-ttattgcattg-gga-atcaggtt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1234 29 +     10149 c----ttaatg-ttattgcattg-gga-atcaggtt
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                574 29 +     10417 c----ttaatg-ttatttcattg-gga-atcaggtt
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110697 29 + 121099817 C----TTAATA-TTATTGCATTg-gga-attaggtt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32264 29 -     47369 c----ttaata-ttattgcattg-gga-attaggtt
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32650 29 -     79414 c----ttaata-tttttgcattg-gga-attaggtt
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29341 29 -     34454 c----ttaata-tttttgcattg-gga-attaggtt
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16742 29 -     22428 c----ttaata-tttttgcattg-gga-attaggtt
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31896 29 -     47109 c----ttaata-ttattgcattg-gga-attaggtt
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239926 29 +   5703754 c----ttaata-ttattgcattg-gga-attaggtt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9516 29 +     21866 c----ttaata-ttattgcattg-gga-attaggtt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                           543 29 +     11297 c----ttaata-ttattgcattg-gga-attagggt
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30936 29 +     58920 c----ttaata-ttattgcattg-gga-attagggt
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17434 29 -     45317 c----ttaata-ttattgcattg-gga-attagggt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25092 29 -     42441 c----ttaata-ttattgcattg-gga-attagggt
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27768 29 -     29113 c----ttaata-ttattgcattg-gga-attagggt
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30845 29 -     48123 c----ttaata-ttattgcattg-gga-attagggt
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1870093 30 +   3870691 c----ttcata-ctattgccttatggt-attatggt
i Spermophilus_dauricus.KZ294078.1                       I 2 C 0
s Symphalangus_syndactylus.tarseq_199                       392929 29 +   1523678 c----ttaatg-ttatttcattg-gga-attatgtt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2368 29 +      9917 t----ttaaca-ttatagcgtta-gag-tttagggt
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9166 29 +     20590 t----ttaaca-ttatagcgtta-gag-tttagggt
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355098 29 - 186847797 C----TTCATA-TTATTGCATTG-GGA-ATTAGGtt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25925 29 -     33621 c----cttata-ttcttacatgt-ggt-attaggtt
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22846 29 +     26378 c----ttaata-ttattgcattg-gga-attagggt
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35645 29 -     78344 c----ttaata-ttattgcattg-gga-attagggt
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22171 29 +     25722 c----ttaata-ttattgcattg-gga-attagggt
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30601 29 -     62838 c----ttaata-ttattgcattg-gga-attagggt
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30590 29 +     46913 c----ttaata-ttattgcattg-gga-attagggt
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11329 29 -     28527 c----ttaata-ttattgcattg-gga-attagggt
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32536 29 -     64340 c----ttaata-ttattgcattg-gga-attagggt
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30574 29 -     63452 c----ttaata-ttattgcattg-gga-attagggt
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12021 29 +     22490 c----ttaata-ttattgcattg-gga-attagggt
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5387 29 -      6147 c----ttaata-ttattgcattg-gga-attagggt
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12300 29 -     13050 c----ttaata-ttattgcattg-gga-attagggt
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257464 29 -   6242583 c----ttaata-ttattgcattg-gga-attagggt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3560 29 +     19340 c----ttaata-ttattgcattg-gga-attagggt
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1837065 29 -   4065304 c----ttaaaa-caattacattt-ctg-attaggtt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      11096 29 -     70247 c----ttaaaa-tgattacattt-ctg-attaggtt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Varecia_rubra.k141_787544                                  26966 29 -     30710 c----ttatta-ttattgcattg-ggg-attaagtt
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25873 29 -    147434 c----ttatta-ttattgcattg-ggg-attaagtt
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175848 29 -    224448 c----ttcata-ctatagcctta-ggt-attatggt
i Xerus_inauris.XerIna_scaffold_2302                     I 2 C 0
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156  0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380  0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524  0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699  0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316  3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992  0 +  89631738 C
e Mus_musculus.chr8                                       41689686  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513  0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334  0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274  0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700  0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8927 37 +     36723 tcaatgtatgaattttggaggaatgcaa-a-cattcaga
s Allenopithecus_nigroviridis.k141_3755588                   49877 37 +     53615 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1904 37 +     13857 taaatgtatgaattttggaggaatgcaa-a-cattcaca
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18459 37 -     21945 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20144 37 +     32033 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73911 13 -     84148 tcagcatatgaat--------------------------
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46149 13 -     78289 tcagcatatgaat--------------------------
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45592  3 +     55831 tca------------------------------------
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44039 13 -     64179 tcggcatatgaat--------------------------
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1147 13 -      3959 tcggcatatgaat--------------------------
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42664 13 +     45454 tcagcatatgaat--------------------------
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48313 13 +     70886 tcagcatatgaat--------------------------
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10486 13 +     30854 tcagcatatgaat--------------------------
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34620 13 +     42133 tcagcatatgaat--------------------------
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2853 13 +     17741 tcaacatatgaat--------------------------
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3478 13 -     15923 tcaacatatgaat--------------------------
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673760 13 +   5030052 tcaacatatgaat--------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3754 13 -     16391 tcaacatatgaat--------------------------
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3313 13 -     17186 tcaacatatgaat--------------------------
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25726 37 -     32367 tcaataaatggattttgaagggacacaa-a-cattcgaa
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 30
s Ateles_geoffroyi_b.tarseq_1536                               276376 13 +  21539123 tcaacatatgaat--------------------------
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12542 13 +     48076 tcaacatatgaat--------------------------
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7677 13 -     28759 tcaacataggaat--------------------------
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35233 13 +     44353 tcaacatatgaat--------------------------
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50602 13 -     71267 tcaacataggaat--------------------------
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24660 13 -     33135 tcaacatatgaat--------------------------
i Ateles_paniscus.k141_866194                            C 0 C 0
s Avahi_laniger.k141_2756659                                  7937 37 +     11645 tcaacatatgaattttggaggaacacag-a-cattcaga
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7945 37 -     19611 tcaacatatgaattttggaggaacacag-a-catacaga
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Cacajao_ayresi.k141_96119                                   9466 13 +     28062 tcaacatacgaat--------------------------
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44760 13 -     91139 tcaacatacgaat--------------------------
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22286 13 +     95584 tcaacatacgaat--------------------------
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22199 13 +    119600 tcaacatacgaat--------------------------
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11851 13 +     18648 tcaacatacgaat--------------------------
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11364 13 -     13885 tcaacatacgaat--------------------------
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3457 13 -      8861 tcaacatatgaat--------------------------
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455846 13 + 189096842 tcaacatacgaat--------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3368 13 +      8664 tcaacatacgaat--------------------------
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1180 37 -      1607 tcaatatatgtattttgaagaggcacaa-a-tgttcaga
i Capromys_pilorides.CapPil_scaffold_762519              C 0 I 26
s Carlito_syrichta.NW_007259797.1                           272485 37 +    496798 TTAACATGCAAATTTtgaaggaacacaa-a-cattcaga
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29366 37 -     39886 tcaacaccttcatcttgaagggacacaa-a-ctttcaga
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 30
s Cavia_aperea.AVPZ01000300.1                              4998069 35 +  23392119 NNNNNNNNNNNNNNNNNNNNNNN--NNN-N-NNNNNNNN
i Cavia_aperea.AVPZ01000300.1                            C 0 I 26
s Cavia_porcellus.DS562891.1                               5001511 35 +  23407841 tcaatgtatgtattttgaagaga--caa-g-tattcaaa
i Cavia_porcellus.DS562891.1                             C 0 I 26
s Cavia_tschudii.CavTsc_scaffold_23560                       64590 35 -     66877 tcaatgtatgtattttgaagaga--caa-g-tattcaaa
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 26
s Cebuella_niveiventris.k141_592277                           6767 13 -     12580 tcaacatacgaat--------------------------
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44825 13 +     53515 tcaacatacgaat--------------------------
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374578 13 -  26074798 tcaacatatgaat--------------------------
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9635 13 -     34880 tcaacatatgaat--------------------------
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68731 13 -     89041 tcaacatatgaat--------------------------
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4444 37 -      5494 ttaacatgcaaattttgaaggaatacaa-a-cattcaga
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                142959 37 -   4669795 taaatgtatgaattttggaggaatgCAA-A-CATTCAGA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46698 37 +     47900 tgaatgtatgaattttggaggaatgcaa-a-cattcaga
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2131 37 -     14410 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46513 37 -    148725 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28791 37 -     40656 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8750 37 +     20796 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13864 37 -     17524 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29596 37 -     34525 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13376 37 -     25376 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  365963 37 -  39242232 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271690 37 +  21565898 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34055 37 -     45857 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28956 37 -     32606 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5119 37 +      8499 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27517 37 +     70610 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24478 37 +     36323 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32345 37 -     33796 tcaacatatgaattctagaggaacacag-a-cattcaga
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6848 37 -     15404 tcaacatatgaattctaggggaacacag-a-cattcaga
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10572 13 -     32913 tcaacatatgaat--------------------------
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20985 13 -     40346 tcaacatatgaat--------------------------
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21240 13 +    216457 tcaacatatgaat--------------------------
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21029 13 +     39636 tcaacatatgaat--------------------------
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240411 37 -   2543920 tcaatacatgtattttgaagagacacaa-a-cattcaga
i Chinchilla_lanigera.JH722012.1                         C 0 I 25
s Chiropotes_albinasus.k141_1091259                          33003 13 -     52013 tcaacatacgaat--------------------------
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44100 13 -    112038 tcaacatacgaat--------------------------
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9651 13 +     34062 tcaacatacgaat--------------------------
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345379 37 +  18827391 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11918 37 -     44032 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306764 37 - 135778131 taaatgtatgaattttggaggaatgCAA-A-CATTCAGA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411177 37 -   2368649 taaatgtatgaattttggaggaatgCAA-A-CATTCAGA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381059 37 - 200372422 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4616 37 -     84244 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Colobus_polykomos.k141_906115                          C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    647079 30 -   1526836 tccatatatgc-------agggtcacag-a-cattcaaa
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 29
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20254 37 +     50838 tcaatagatgtattttgaagagacacac-a-cattcaga
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 25
s Cuniculus_paca.CunPac_flattened_line_7025                   8771 37 +     36344 tcaatttatgtattttgaagggacagaa-a-cattcaga
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 28
s Dasyprocta_punctata.DasPun_flattened_line_15900            29778 37 +     75252 tcaatgtatgtattttgaagagacacaa-a-cattcaga
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 30
s Daubentonia_madagascariensis.ctg71                        294253 37 +  12879189 tcaacatacacattttggagggacacaa-a-cattcaga
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100485 37 -    115145 tcaatatatgtattctgaagagacacaa-a-cattcaga
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 25
s Dipodomys_ordii.KN672350.1                              18952241 37 -  37912305 ttgatgtatttattatgatttgtcacaa-g-ccttctga
i Dipodomys_ordii.KN672350.1                             C 0 I 30
s Dipodomys_stephensi.DipSte_scaffold_89095                   7154 37 -     10735 ttgatgtatttattatgatttgtcacaa-g-ccttctga
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 28
s Dolichotis_patagonum.DolPat_scaffold_80628                 10864 37 +     14636 tcaatgtatgtattttgaagagacacaa-a-cattcaga
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 30
s Erythrocebus_patas.Contig38                               264906 37 +  21539334 taaatgtatgaattttggaagaatgcaa-a-cattcaga
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16472 37 -     24895 tcaacatatgaattttggaggaacacag-a-cattcaga
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               44181 37 -     70999 tcaacatatgaattttggaggaacacag-a-cattcaga
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              88152 37 +    112731 tcaacatatgaattttggaggaacacag-a-cattcaga
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44715 37 +     68309 tcaacatatgaattttggaggaacacag-a-cattcaga
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 55039 37 -     65740 tcaacatatgaattttggaggaacacag-a-cattcaga
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25671 37 -     75513 tcaacatatgaattttggaggaacacag-a-cattcaga
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49866 37 -     97555 tcaacatatgaattttggaggaacacag-a-cattcaga
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6590 37 +     30972 tcaacatatgaattttggaggaacacag-a-cattcaga
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44309 37 -     52037 tcaacatatgaattttggaggaacacag-a-cattcaga
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60713 37 -    111500 tcaacatatgaattttggaggaacacag-a-cattcaga
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923818 37 -   3816255 tcaatatatgtaatttgaagagacataa-a-cattcaga
i Fukomys_damarensis.KN121974.1                          C 0 I 27
s Galeopterus_variegatus.GalVar_scaffold_51812                3105 34 -     28519 tccacatacgaattttggag---cacaa-g-catttaga
i Galeopterus_variegatus.GalVar_scaffold_51812           I 249 I 30
s Glis_glis.GliGli_scaffold_163929                            2988 37 -      6791 tcaaca-atgcatttttaagggacacaaaa-cattcaga
i Glis_glis.GliGli_scaffold_163929                       C 0 I 33
s Gorilla_beringei.k141_420802                                1211 37 -      1361 tcaatgtatgaattttggaggaatgcaa-a-cattcaga
i Gorilla_beringei.k141_420802                           I 112 n 37
s Gorilla_gorilla.LT578341.1                                258087 37 - 186649187 tcaatgtatgaattttggaggaatgcaa-a-cattcaga
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    4059 38 -     78134 tcaacacatgcattttgaagggacacagta-tgttaaga
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 30
s Hapalemur_alaotrensis.k141_330369                          16400 37 -     40692 tcaacatatgaagtttggaggaacacag-a-cattcaaa
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37799 37 +     49394 tcaacatatgaagtttggaggaacacag-a-cattcaaa
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62670 37 -     66874 tcaacatatgaagtttggaggaacacag-a-cattcaaa
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11541 37 -     42923 tcaacatatgaagtttggaggaacacag-a-cattcaaa
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18543 37 -     53142 tcaacatatgaagtttggaggaacacag-a-cattcaaa
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934202 37 -  22651954 tcaatatatgtattttgaagagacgcaa-a-cattcaga
i Heterocephalus_glaber.JH602082.1                       C 0 I 29
s Hoolock_leuconedys.ctg274                                    144560 37 -    630532 tcaatgtatgaattttggaggaatgcaa-a-cattcaga
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73456 37 +    143317 tcaatgtacgtattttgaggagacacaa-a-cattcaga
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 30
s Hylobates_agilis.k141_1155965                               7591 37 +     12352 tcaatgtatgaattttggaggaatgcaa-a-cattcaga
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14776 37 +     55766 tcaatgtatgaattttggaggaatgcaa-a-cattcaga
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054306 37 + 191637585 tcaatgtatgaattttggaggaatgcaa-a-cattcaga
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803184 37 +  11177569 tcaatgtatgaattttggaggaatgcaa-a-cattcaga
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9369 37 -    135385 ccaatatatgtattttgaaaagacacaa-a-cattcaga
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 30
s Ictidomys_tridecemlineatus.JH393364.1                     388545 37 +   7955117 tcaataaacatattttgaagggacacaa-a-cattcaga
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 30
s Indri_indri.k141_2415743                                    4079 37 +     11955 tcaacatatgaattttggaggaacacag-a-cattcaga
i Indri_indri.k141_2415743                               C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44927 13 +    110728 tcaacatatgaat--------------------------
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lemur_catta.scaffold_24                                 14761197 37 +  30322482 tcaacataagaagtttggaggaacacag-a-cattcaga
i Lemur_catta.scaffold_24                                C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                         408 13 -     23187 tcaacatatgaat--------------------------
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            721 13 -     14280 tcaacatatgaat--------------------------
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         364 13 +      3713 tcaacatatgaat--------------------------
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      555 12 +      8855 tcaacata-gaat--------------------------
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5357 12 -     13645 tcaacata-gaat--------------------------
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10705 37 +     29618 tcaacatatgaattttggaggaacacag-a-cattcaga
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10701 37 +     31569 tcaacatatgaattttggaggaacacag-a-cattcgga
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10711 37 +     24756 tcaacatatgaattttggaggaacacag-a-cattcaga
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10711 37 +     16388 tcaacatatgaattttggaggaacacag-a-cattcaga
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Lophocebus_aterrimus.ctg367                               335841 37 -   1826925 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47233 37 -     61512 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374895 37 -  60120075 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27163 37 +     30207 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2001 37 -      5035 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27116 37 +     30527 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38292 37 -     50087 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48037 37 +     51645 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417239 37 - 187317192 taaatgtatgaattttggaggaatgCAA-A-CATTCAGA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401470 37 +  25927173 taaatgtatgaattttggaggaatgcAA-A-CATTCAGA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50641 37 -     62418 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3172 37 +     14901 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47114 37 +     59329 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273021 37 +    668171 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1653 37 -      5049 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4819 37 +     17132 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324309 37 +  24302211 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359140 37 -    752769 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502758 37 +  40650429 tcaataaacacattttgaagggacacaa-a-cattcaga
i Marmota_marmota.CZRN01000018.1                         C 0 I 30
s Mico_argentatus.k141_582562                                11950 13 +     17804 tcaacatacgaat--------------------------
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12450 13 -     12984 tcaacatacgaat--------------------------
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20769 13 -     26561 tcaacatacgaat--------------------------
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986543 37 +  93316391 TCAACTTATGAATTCTGGAGGAACACAG-A-CATCCAGA
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24407 37 -     27822 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54318 37 -     62432 tcaacttatgaattctggaggaacacag-a-catccaga
i Mirza_zaza.k141_766280                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               1062 38 -    124358 taaacatatgcattttgaagagacacacta-tattcaga
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 I 24
s Myocastor_coypus.MyoCoy_scaffold_15261                     64768 35 +     67721 tcaatatatgtatttggaag--acacaa-a-cattcaga
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 26
s Nasalis_larvatus.k141_1350636                              31184 37 +     34575 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           55478 37 -    132029 tcaatgtatgaattttggaggaatgcaa-a-cattcaga
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11587 37 -     16345 tcaatgtatgaattttggaggaatgcaa-a-cattcaga
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17472 37 +     22201 tcaatgtatgaattttggaggaatgcaa-a-cattcaga
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415693 37 -  22158432 tcaatgtatgaattttggaggaatgcaa-a-cattcaga
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27870 37 -     54323 tcaatgtatgaattttggaggaatgcaa-a-cattcaga
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Octodon_degus.JH651603.1                                11056863 37 -  11899542 tcaatatatgtattttgaagagacacaa-a-cattcaga
i Octodon_degus.JH651603.1                               C 0 I 26
s Pan_paniscus.AJFE02004362.1                                  888 37 +      1339 tcaatgtatgaattttggaggaatgCAA-A-CATTCAGA
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             15836 38 -     26668 tcaatgtatgaattttggaggaatgCAA-ACCATTCAGA
i Pan_troglodytes.NBAG03003091.1                         I 371 I 50
s Papio_anubis.CM001495.2                                   245318 37 - 183742232 taaatgtatgaattttggaggaatgCAA-A-CATTCAGA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11603 37 +     21308 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294346 37 -  20919399 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24243 37 -     27687 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     922 37 +     10553 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   882 37 -     10386 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Papio_ursinus.k141_5784434                             C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3585 37 +      9367 ttgatagatttattctgaaatgccacaa-g-tattcaga
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 30
s Petromus_typicus.PetTyp_scaffold_17301                     33738 36 -     56120 tcaatacatgtattttggagagacacaa-t-cctt-aga
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 30
s Piliocolobus_badius.k141_2704958                            4566 37 +     55023 taaatgtatgaattctggaggaatgcaa-a-cattcaga
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4088 37 -     89929 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4678 37 +     40849 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256408 37 +  14605196 taaatgtatgaattttggaggaatgcAA-A-CATTCAGA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66468 13 +    207309 tcaacatatgaat--------------------------
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7556 13 -     25401 tcaacatatgaat--------------------------
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33304 13 +     58159 tcaacatatgaat--------------------------
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33580 13 +     63561 tcaacatatgaat--------------------------
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33340 13 +     51148 tcaacatatgaat--------------------------
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558310 13 -   4542175 tcaacatatgaat--------------------------
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33324 13 +     51125 tcaacatatgaat--------------------------
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9741 13 +     39866 tcaacatatgaat--------------------------
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4823 13 -      9282 tcaacatatgaat--------------------------
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44227 13 -     87950 tcaacatatgaat--------------------------
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44621 13 -     88961 tcaacatatgaat--------------------------
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9319 13 -     39403 tcaacatatgaat--------------------------
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44270 13 +     87928 tcaacatatgaat--------------------------
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9318 13 -     60166 tcaacgtatgaat--------------------------
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16255  3 -     67232 tca------------------------------------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44171 13 -     90634 tcaacatatgaat--------------------------
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45638 13 +     89403 tcaacgtatgaat--------------------------
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181246 37 - 189387572 tcaatgtatgaattttggaggaatgCAA-A-CATTCAGA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      195986 37 -   9816681 tcaatgtatgaattttggaggaatgcaa-a-cattcaga
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29766 37 +     69807 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46947 37 -     80239 taaatgtatgatttttggaggaatgcaa-a-cattcaga
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984345 37 +   4620579 tcaacatatgaagttTGGAGGAACACAG-A-CATTCAGA
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567831 37 -   2598838 tcaacatatgaattttggaggaacacag-a-CATTCAGA
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5469 37 -      7103 tcaacatatgaattttggaggaaaacag-a-cattcaga
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             6066 37 -     11706 tcaacatatgaattttggaggaacacag-a-cattcaga
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9803 37 -     30655 tcaacatatgaattttggaggaacacag-a-cattcaga
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          36117 37 +     46564 tcaacatatgaattttggaggaacacag-a-cattcaga
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96396 37 -     98465 tcaacatatgaattttggaggaacacag-a-cattcaga
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                         10035 37 +     35169 tcaacatatgaattttggaggaacacag-a-cattcaga
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29133 37 +     91421 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155685 37 -   7812017 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                              9990 37 +     72585 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3597 37 +      7119 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124267 37 + 195417433 taaatgtatgaattttggaggaatgCAA-A-CATTCAGA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238439 37 -   7961872 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_161125                                8899 13 +     12412 tcaacatacgaat--------------------------
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               360 13 +      9876 tcaacatatgaat--------------------------
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            15963 13 -     24931 tcaacatatgaat--------------------------
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                                843 13 +      4564 tcaacatatgaat--------------------------
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3648 13 -      7443 tcaacatatgaat--------------------------
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394554 13 - 209938924 tcaacatacgaat--------------------------
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1263 13 +     10149 tcaacatatgaat--------------------------
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                603 13 +     10417 tcaacatatgaat--------------------------
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110726 13 + 121099817 tcaacatatgaat--------------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32293 13 -     47369 tcaacatatgaat--------------------------
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32679 13 -     79414 tcaacatatgaat--------------------------
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29370 13 -     34454 tcaacatatgaat--------------------------
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16771 13 -     22428 tcaacatatgaat--------------------------
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31925 13 -     47109 tcaacatatgaat--------------------------
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239955 13 +   5703754 tcaacatatgaat--------------------------
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9545 13 +     21866 tcaacatatgaat--------------------------
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                           572 37 +     11297 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      30965 37 +     58920 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17463 37 -     45317 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25121 37 -     42441 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27797 37 -     29113 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30874 37 -     48123 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1870123 37 +   3870691 tcaataaacacattttgaagggacacaa-a-cattcaaa
i Spermophilus_dauricus.KZ294078.1                       C 0 I 30
s Symphalangus_syndactylus.tarseq_199                       392958 37 +   1523678 tcaatgtatgaattttggaggaatgcaa-a-cattcaga
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                2397 37 +      9917 ttaacatgcaaattttgaaggaacacaa-a-cattcaga
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9195 37 +     20590 ttaacatgcaaattttgaaggaacacaa-a-cattcaga
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355127 37 - 186847797 taaatgtatgaattttggaggaatgCAA-A-CATTCAGA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              25954 37 -     33621 tcaaagtatgtattttgaagagacacaa-c-ccttcaga
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 30
s Trachypithecus_auratus.k141_1189070                        22875 37 +     26378 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35674 37 -     78344 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22200 37 +     25722 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30630 37 -     62838 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30619 37 +     46913 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11358 37 -     28527 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32565 37 -     64340 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30603 37 -     63452 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12050 37 +     22490 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5416 37 -      6147 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12329 37 -     13050 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257493 37 -   6242583 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3589 37 +     19340 taaatgtatgaattttggaggaatgcaa-a-cattcaga
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tupaia_chinensis.KB320699.1                              1837094 36 -   4065304 tcaataagtgaatt-tggtggattgtga-a-cattgaga
i Tupaia_chinensis.KB320699.1                            C 0 I 11
s Tupaia_tana.TupTan_flattened_line_394                      11125 36 -     70247 tcaataagtgaatt-tggtggattgtga-a-cattgaga
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 30
s Varecia_rubra.k141_787544                                  26995 37 -     30710 tcaacatatgaattttggaggaacacag-a-cattcaga
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25902 37 -    147434 tcaacatatgaattttggaggaacacag-a-cattcaga
i Varecia_variegata.k141_289850                          C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175877 37 -    224448 tcaacaaacacattttgaagggacgcaa-a-cattcaga
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 30
e Sorex_araneus.JH798187.1                                 4672629 18 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3667501 20 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948156  0 +   3037898 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                 84 19 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    48080 19 +    145209 I
e Echinops_telfairi.JH980293.1                            62856898 19 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1351 19 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227101 19 +  10337057 I
e Desmodus_rotundus.KZ672289.1                            11866670 27 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607735 13 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  259 13 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21092 13 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111362 13 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            13996 13 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1681 20 +      9923 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30518 20 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106279 20 -    112863 I
e Ursus_maritimus.KK499267.1                                183526 20 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8159 20 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6084 20 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40556 20 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453306 20 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199510 20 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356505 20 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046         9889 20 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27606 20 -     74585 I
e Lycaon_pictus.CM007581.1                                41615914 20 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        814878 20 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917487 20 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108340 20 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616759 20 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223624 20 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10281 20 -     23171 I
e CanFam4.chr16                                           42506645 20 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  6811 20 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217075 20 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20416955 20 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1380  0 -      1899 C
e Vicugna_pacos.KN270157.1                                   77709 33 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    4984 13 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367176 22 -  33153633 I
e Trichechus_manatus.JH594705.1                            6482970 32 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175300 20 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481590 20 -    610378 I
e Tapirus_terrestris.TapTer_scaffold_755                    107020 20 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193052 20 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4145 13 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15738 20 +     22964 I
e Sus_scrofa.CM000828.4                                    6645369 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126325 20 +    196729 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865554 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51524  0 +     77746 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117024 13 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9681 20 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76710 20 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916165 19 +   3329780 I
e Rattus_norvegicus.chr16                                 37024699  0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                   449 20 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100546 20 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538725 20 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842210 20 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53598 20 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39797  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5608 32 +      7663 I
e Platanista_gangetica.PlaMin_flattened_line_83166            2593 22 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5395 20 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5576 22 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249738  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16489 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617524 20 +   2937107 I
e Panthera_tigris.KE722367.1                               3973891 20 +   8748460 I
e Panthera_pardus.KV860321.1                              18463232 20 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   25906 20 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6518 20 +     17875 I
e Ovis_aries.CM001607.2                                   26405999 20 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104051 22 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6532  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    95953  0 -    140218 C
e Okapia_johnstoni.LVCL01S0005463.1                          16287 20 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438404 20 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129316  3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233648 22 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121143 13 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         3815 20 +     18357 I
e Myotis_lucifugus.GL429869.1                               385030 20 +   4330536 I
e Myotis_davidii.KB100139.1                                4389002 20 +   6019432 I
e Myotis_brandtii.KE162005.1                               9794827 20 +  10118263 I
e Mus_spretus.CM004101.1                                  39498971  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58217992  0 +  89631738 C
e Mus_musculus.chr8                                       41689686  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596513  0 + 120012414 C
e Murina_feae.MurFea_scaffold_17764                          42565 15 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   19909 16 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27317 20 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180705 20 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   360982 22 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43528 20 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364608 20 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965334  0 +  27267610 C
e Micronycteris_hirsuta.MicHir_scaffold_2233                186460 20 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     88877 22 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52274  0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       151765 19 +    207569 I
e Manis_pentadactyla.KN006162.1                             222222 20 +    317179 I
e Manis_javanica.JSZB01003497.1                             674922 20 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224640 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39086283 32 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342593 22 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_16567                    64561 20 -     65777 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73246 22 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241506  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11408 22 -     16823 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71541 20 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_164997               2450 20 -      2730 I
e Hipposideros_armiger.JXIK01000431.1                      1553013 20 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9015 21 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1617 32 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 10872 20 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32175 20 -    327341 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93206 20 -     95226 I
e Felis_nigripes.FelNig_flattened_line_31944                 29083 20 -     30238 I
e Felis_catus_fca126.CM031415.1                          185117983 20 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               226 22 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72513 22 -    133382 I
e Equus_przewalskii.KK951119.1                              412726 20 -    498745 I
e Equus_caballus.CM000403.2                               21376744 20 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3042805 20 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580263 20 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15850  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33914  0 +    110024 C
e Elaphurus_davidianus.JRFZ01104969.1                       241489 20 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7658 20 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140660 20 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  665860 20 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633305 22 -  35494412 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5742 20 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118042  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46275  0 -     83289 C
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4171 20 -      8242 I
e Condylura_cristata.JH655891.1                           35808320 13 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20421 20 +     27315 I
e Catagonus_wagneri.CatWag_scaffold_2839                     80971 21 -    217609 I
e Capra_hircus.CM004588.1                                 26593135 20 +  44709034 I
e Capra_aegagrus.CM003241.1                               27410861 20 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210318 33 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666660 33 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632373 33 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1531772 20 -   4408762 I
e Bos_taurus.CM000203.6                                   27546764 20 -  45695690 I
e Bos_mutus.JH880303.1                                      756622 20 +   1948126 I
e Bos_indicus.CM003047.1                                  20358058 20 +  48749331 I
e Bison_bison.KN261452.1                                     23668 20 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88139 20 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1399 22 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7964899 22 -  23207421 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52209 20 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587132 20 +   2318259 I
e Allactaga_bullata.AllBul_scaffold_20030                    19945  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27700  0 +     63021 C
e Acinonyx_jubatus.LLWD01001279.1                           814287 20 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       8964 50 +     36723 tca--------------------------------ga------------------------------tct-g-tttg-a--cCTC---ACAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
s Acomys_cahirinus.AcoCah_scaffold_21377                     27700  2 +     63021 ------------------------------------------------------------------------------------------------------------------------------------CC
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 4
s Allactaga_bullata.AllBul_scaffold_20030                    19945  2 -     61208 ------------------------------------------------------------------------------------------------------------------------------------CT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 4
s Acinonyx_jubatus.LLWD01001279.1                           814307 44 +   1699592 TAA--------------------------------GA------------------------------TTTTT-TTGG-A--CTCC---AGAGCCAAA-AAT-GGCAGTGGA-ATTT------------------
i Acinonyx_jubatus.LLWD01001279.1                        I 20 I 28
s Ailuropoda_melanoleuca.LNAT01000098.1                   20416975 43 +  29979442 tca--------------------------------ga------------------------------ttt-g-ttgg-a--ctcc---atagccAAA-AAT-TGCAGTGGA-ATTT------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 20 I 28
s Ailurus_fulgens.LNAC01001112.1                            217095 43 +    347723 tca--------------------------------ga------------------------------ttt-g-ttgg-a--ctcc---agagccAAA-AAT-GGCAGTGGA-ATTT------------------
i Ailurus_fulgens.LNAC01001112.1                         I 20 I 28
s Allenopithecus_nigroviridis.k141_3755588                   49914 50 +     53615 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1941 50 +     13857 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18496 50 -     21945 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20181 50 +     32033 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587152 50 +   2318259 tct--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---agagccAAC-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Ammotragus_lervia.NIVO01071767.1                       I 20 I 22
s Antilocapra_americana.AntAmePen_scaffold_21030             52229 50 -     68529 tct--------------------------------ca------------------------------tct-g-ttgg-a--ctcc---agagccAAC-ACA-GACAGTGGA-ATTT----------G-CTCACC
i Antilocapra_americana.AntAmePen_scaffold_21030         I 20 I 22
s Aplodontia_rufa.AprRuf_scaffold_46868                      25793 27 -     32367 TCA--------------------------------GA------------------------------TAT-G-TTTA-A--TTCC---AGAGCCAAA-------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 30 I 12
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6831 50 -     15198 tct--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---agagccATA-AAG-AGCAGTGGC-ATTT----------G-CTCACC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 20 I 3
s Avahi_laniger.k141_2756659                                  7974 80 +     11645 tcataggaacatcagagtagtgc-ttt-agactcaaa------------------------------tcc-g-tttg-a--gcca---agagcccAA-ACT-TGCAGTGGA-ATTT----------T-CTTGCC
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               7982 80 -     19611 tcatagGAACATCAGAGTAGTGC-TTT-AGACTCAAA------------------------------TCC-A-TTTG-A--GCCA---AGAGCCCAA-ACT-TGCAGTGGA-ATTT----------T-CTTGCC
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7964921 50 -  23207421 tca--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---acacccaAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Balaenoptera_acutorostrata.KI537508.1                  I 22 I 22
s Balaenoptera_bonaerensis.DF411050.1                         1421 50 -     25979 tca--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---acacccaAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Balaenoptera_bonaerensis.DF411050.1                    I 22 I 22
s Beatragus_hunteri.BeaHun_scaffold_7278                     88159 50 +    124022 TCT--------------------------------GA------------------------------TCT-G-TTGG-A--CTCC---AGAGCCAAC-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 20 I 22
s Bison_bison.KN261452.1                                     23688 50 +    288883 tct--------------------------------ga------------------------------tcc-g-ttgg-a--ctcc---agagccAAC-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Bison_bison.KN261452.1                                 I 20 I 22
s Bos_indicus.CM003047.1                                  20358078 50 +  48749331 tct--------------------------------ga------------------------------tcc-g-ttgg-a--ctcc---agagccAAC-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Bos_indicus.CM003047.1                                 I 20 I 22
s Bos_mutus.JH880303.1                                      756642 50 +   1948126 tct--------------------------------ga------------------------------tcc-g-ttgg-a--ctcc---agagccAAC-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Bos_mutus.JH880303.1                                   I 20 I 22
s Bos_taurus.CM000203.6                                   27546784 50 -  45695690 tct--------------------------------ga------------------------------tcc-g-ttgg-a--ctcc---agagccAAC-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Bos_taurus.CM000203.6                                  I 20 I 22
s Bubalus_bubalis.KI419123.1                               1531792 50 -   4408762 tct--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---agagccAAC-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Bubalus_bubalis.KI419123.1                             I 20 I 22
s Camelus_bactrianus.KN276810.1                            7632406 36 +  17673402 ---------------------------------------------------------------------------------ctcc---agagccAAA-ACC-AGCAGTGGA-ATTT----------G-CTCACC
i Camelus_bactrianus.KN276810.1                          I 33 I 22
s Camelus_dromedarius.KN272107.1                           4666693 36 +   7040546 ---------------------------------------------------------------------------------ctcc---agagccAAA-ACC-AGCAGTGGA-ATTT----------G-CTCACC
i Camelus_dromedarius.KN272107.1                         I 33 I 22
s Camelus_ferus.KB017975.1                                 1210351 36 +   1652518 ---------------------------------------------------------------------------------ctcc---agagccAAA-ACC-AGCAGTGGA-ATTT----------G-CTCACC
i Camelus_ferus.KB017975.1                               I 33 I 22
s CanFam4.chr16                                           42506665 43 +  60362399 TCA--------------------------------GA------------------------------TTT-G-TTGG-A--CTCC---AGAGCCAAA-AAT-GGCAGTGGA-ATTT------------------
i CanFam4.chr16                                          I 20 I 28
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10301 43 -     23171 TCA--------------------------------GA------------------------------TTT-G-TTGG-A--CTCC---AGAGCCAAA-AAT-GGCAGTGGA-ATTT------------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 20 I 28
s Canis_lupus_dingo.QKWQ01000480.1                          223644 43 +   9314153 TCA--------------------------------GA------------------------------TTT-G-TTGG-A--CTCC---AGAGCCAAA-AAT-GGCAGTGGA-ATTT------------------
i Canis_lupus_dingo.QKWQ01000480.1                       I 20 I 28
s Canis_lupus_familiaris.chr16                            41616779 43 +  59632846 tca--------------------------------ga------------------------------ttt-g-ttgg-a--ctcc---agagccAAA-AAT-GGCAGTGGA-ATTT------------------
i Canis_lupus_familiaris.chr16                           I 20 I 28
s Canis_lupus_orion.HG994398.1                            45108360 43 -  63665305 TCA--------------------------------GA------------------------------TTT-G-TTGG-A--CTCC---AGAGCCAAA-AAT-GGCAGTGGA-ATTT------------------
i Canis_lupus_orion.HG994398.1                           I 20 I 28
s Capra_aegagrus.CM003241.1                               27410881 50 -  46296322 tct--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---agagccAAC-ACC-GGCAGTGGA-ATTT----------G-CTCACC
i Capra_aegagrus.CM003241.1                              I 20 I 22
s Capra_hircus.CM004588.1                                 26593155 50 +  44709034 tct--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---agagccAAC-ACC-GGCAGTGGA-ATTT----------G-CTCACC
i Capra_hircus.CM004588.1                                I 20 I 22
s Capromys_pilorides.CapPil_scaffold_762519                   1243 49 -      1607 TTC--------------------------------AG------------------------------TCT-G-TTGG-A--CT-C---AGAAGCTAA-ACT-AGCTGTGAA-ATTG----------G-CTTGCT
i Capromys_pilorides.CapPil_scaffold_762519              I 26 C 0
s Carlito_syrichta.NW_007259797.1                           272522 80 +    496798 tca--------------------------------tagcaacAGCAGAGTAGTGCTTCAGACTCAAGTCT-G-TTTC-A--CTCC---AGAGCCAAA-AAC-TGGAGTGGG-ATTT----------G-CTTGCT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1701 50 +      9923 tct--------------------------------ga------------------------------tct-g-tcag-a--ctcc---agagccATA-ATG-GGCAGTGGC-GTTT----------G-ATTACC
i Carollia_perspicillata.CarPer_scaffold_107871          I 20 I 3
s Castor_canadensis.CasCan_scaffold_39952                    29433 50 -     39886 tca--------------------------------ga------------------------------tct-g-tttc-a--ctcc---agagACAAA-ACT-GACAGTGAA-ACTT----------G-CTTGTC
i Castor_canadensis.CasCan_scaffold_39952                I 30 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     80992 50 -    217609 tca--------------------------------gg------------------------------tct-g-ttga-a--ctcc---agagtcAAA-ACT-GGCTGTGGA-ATTT----------G-CTCACC
i Catagonus_wagneri.CatWag_scaffold_2839                 I 21 I 22
s Cavia_aperea.AVPZ01000300.1                              4998130 32 +  23392119 ----------------------------------------------------------------------------------------NNNNNNAAA-ACT-AGCAGTGAA-ATTT----------G-CTTGTT
i Cavia_aperea.AVPZ01000300.1                            I 26 C 0
s Cavia_porcellus.DS562891.1                               5001572 32 +  23407841 ----------------------------------------------------------------------------------------AGAAACAAA-ACT-AGCAGTGAA-ATTT----------G-CTTGTT
i Cavia_porcellus.DS562891.1                             I 26 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64651 32 -     66877 ----------------------------------------------------------------------------------------AGAAACAAA-ACT-AGCAGTGAA-ATTT----------G-CTTGTT
i Cavia_tschudii.CavTsc_scaffold_23560                   I 26 C 0
s Cephalopachus_bancanus.k141_1689090                         4481 80 -      5494 tca--------------------------------tagcaacagcagagtagtgcttcagactcaagtct-g-tttc-a--ctcc---agagccAAA-AAC-TGGAGTGGG-ATTT----------G-CTTGCT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493608 50 -  27778364 tca--------------------------------ga------------------------------tct-c-ttgg-a--ctcc---agagGCGAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Ceratotherium_simum.JH767749.1                         I 20 I 36
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20441 50 +     27315 tca--------------------------------ga------------------------------tct-c-ttgg-a--ctcc---agagGCGAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 20 I 36
s Cercocebus_atys.KQ010504.1                                142996 50 -   4669795 TCA--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46735 50 +     47900 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2168 50 -     14410 tca--------------------------------GA------------------------------TCC-A-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46550 50 -    148725 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28828 50 -     40656 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8787 50 +     20796 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13901 50 -     17524 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29633 50 -     34525 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13413 50 -     25376 tca--------------------------------GA------------------------------TCC-A-TTTG-A--CTTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366000 50 -  39242232 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271727 50 +  21565898 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATTTT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34092 50 -     45857 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       28993 50 -     32606 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5156 50 +      8499 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---CGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27554 50 +     70610 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24515 50 +     36323 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            14009 43 -     19938 TCA--------------------------------GG------------------------------TAT-G-TTTG-A--CTTC---GGAGCCAAA-ACT-GGCGTTGGA-ATTT------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 13 C 0
s Cheirogaleus_major.k141_666340                             32382 80 -     33796 tcatagGAACATCAGAGTAGTGC-TTT-AGACTCAGA------------------------------TCT-G-TTTG-A--CCCA---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGTC
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             6885 80 -     15404 tcataggaacatcagagtagtgc-ttt-agactcaga------------------------------tct-g-tttg-a--ccca---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGTC
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240473 49 -   2543920 ACC--------------------------------GA------------------------------TTT-G-CTGG-A--CT-C---AGAACAAAA-ACT-AGCAATGAC-ATTT----------C-CTTGTT
i Chinchilla_lanigera.JH722012.1                         I 25 C 0
s Chlorocebus_aethiops.ctg25                                345416 50 +  18827391 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       11955 50 -     44032 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306801 50 - 135778131 TCA--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  272 50 +     10270 TCA--------------------------------GA------------------------------TCC-A-TTTG-A--CATC---AGAGCCAAA-ACT-GGCATTGGA-CTTT----------G-CTTACC
i Choloepus_didactylus.ChoDid_scaffold_147047            I 13 C 0
s Choloepus_hoffmanni.KN194906.1                            607748 50 -    839153 TCA--------------------------------GA------------------------------TCC-A-TTTG-A--CATC---AGAGCCAAA-ACT-GGCATTGGA-CTTT----------G-CTTACC
i Choloepus_hoffmanni.KN194906.1                         I 13 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                103 38 -      4087 TCA--------------------------------GA------------------------------TCC-T-TTAG-A--CTCT---TGAACCCAA-ACT-GCCAGTAG------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          I 19 C 0
s Colobus_angolensis.KN981557.1                             411214 50 -   2368649 TCA--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAC-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381096 50 - 200372422 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAC-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4653 50 -     84244 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAC-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808333 50 +  53390261 ATG--------------------------------GA------------------------------TTT-G-TTGA-ACTCC-----TGAACCAAA-ACT-GGCTGTGGA-ATTT----------T-GTCATC
i Condylura_cristata.JH655891.1                          I 13 I 23
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4191 50 -      8242 tca--------------------------------aa------------------------------ttt-g-ttag-a--ctcc---agagccAAA-ACTGG-CAGTGAA-ATTT----------G-CTTATT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 20 I 22
s Cricetomys_gambianus.CriGam_scaffold_14425                 46275  2 -     83289 ------------------------------------------------------------------------------------------------------------------------------------CT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5762 43 +     87169 tca--------------------------------ga------------------------------ttt-t-ttgg-a--ctcc---agagccAAA-AAT-GGTGGTGGA-ATTT------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 20 I 28
s Ctenodactylus_gundi.CteGun_scaffold_65                    647138 50 -   1526836 TCA--------------------------------GA------------------------------TCT-A-TTTG-A--TTTC---AGAGCCAAA-ATT-GGGGGTGAA-ATTT----------G-CTTGTC
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 29 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20316 49 +     50838 TTC--------------------------------AA------------------------------TAT-G-TTGG-A--CT-C---AGAAGTAAA-ACT-AGCTGTGAA-ACTG----------G-CTTGCT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 25 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   8836 48 +     36344 TCC--------------------------------AA-------------------------------AT-G-TTGG-A--CT-C---AGAACCAAG-ATT-AGCAGTGAA-ATTT----------G-CTTGTT
i Cuniculus_paca.CunPac_flattened_line_7025              I 28 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29845 49 +     75252 tcc--------------------------------aa------------------------------gtt-g-ttgg-a--ct-c---agaaccAAA-ACT-AGCAGTGAA-ATTT----------G-CTTGTT
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 30 C 0
s Dasypus_novemcinctus.JH564415.1                          2111375 50 -   2246927 TCA--------------------------------GA------------------------------TAT-G-TTTG-A--CTTC---AGAGCCAAA-ACC-GGCAATGGA-ATCT----------G-CTTGCC
i Dasypus_novemcinctus.JH564415.1                        I 13 C 0
s Daubentonia_madagascariensis.ctg71                        294290 78 +  12879189 tcatag---caACCTCAGTAGTGCttt-agactcaga------------------------------tct-g-tttg-a--ctcc---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633327 50 -  35494412 tca--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---acacccAAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Delphinapterus_leucas.KZ290073.1                       I 22 I 22
s Desmodus_rotundus.KZ672289.1                            11866697 41 -  20541912 -------------------------------------------------------------------------ttgg-a--ctcc---agagccATA-ATG-GGCAGTGGC-ATTT----------G-CTCAcc
i Desmodus_rotundus.KZ672289.1                           I 27 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665880 50 -   1390856 tca--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---agagGCGAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 20 I 36
s Diceros_bicornis.DicBicMic_scaffold_5955                  140680 50 -    198055 tca--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---agagGCGAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Diceros_bicornis.DicBicMic_scaffold_5955               I 20 I 36
s Dinomys_branickii.DinBra_scaffold_10381                   100547 49 -    115145 TCC--------------------------------GA------------------------------TCT-G-CTAG-A--CT-C---AGAACCAAA-ACT-AGCAGTGAA-ATTT----------C-TTTGTT
i Dinomys_branickii.DinBra_scaffold_10381                I 25 C 0
s Dipodomys_ordii.KN672350.1                              18952308 50 -  37912305 TCA--------------------------------AA------------------------------CCT-G-TCAG-A--CTAC---AGAGCCAAA-ATT-AGCCGTGAA-ATTT----------G-CATTCC
i Dipodomys_ordii.KN672350.1                             I 30 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   7219 50 -     10735 TCA--------------------------------AA------------------------------CCT-G-TCAG-A--CTAC---AGAGCCAAA-ATT-AGCAGTGAA-ATTT----------G-CATTCC
i Dipodomys_stephensi.DipSte_scaffold_89095              I 28 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10931 49 +     14636 TCC--------------------------------AA------------------------------CCT-G-CTGG-A--CT-C---AGAACCAAA-ACT-AGCAGTGAA-ATTT----------G-CTTGTT
i Dolichotis_patagonum.DolPat_scaffold_80628             I 30 C 0
s Echinops_telfairi.JH980293.1                            62856917 38 - 111700974 TCA--------------------------------GA------------------------------TCT-T-TTTG-A--CTCG---AGAACTCAC-ACG-GTCCATGA------------------------
i Echinops_telfairi.JH980293.1                           I 19 C 0
s Eidolon_helvum.AWHC01266696.1                               7678 50 +     19438 tta--------------------------------ga------------------------------tct-g-ttag-a--ctcc---agagccAAA-ACT-GGCCATGGA-ATTT----------G-CTCACC
i Eidolon_helvum.AWHC01266696.1                          I 20 I 22
s Elaphurus_davidianus.JRFZ01104969.1                       241509 50 -    607251 tct--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---agagccAAC-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Elaphurus_davidianus.JRFZ01104969.1                    I 20 I 22
s Ellobius_lutescens.LOEQ01008920.1                          33914  2 +    110024 ------------------------------------------------------------------------------------------------------------------------------------CC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 4
s Ellobius_talpinus.LOJH01026522.1                           15850  2 +     18970 ------------------------------------------------------------------------------------------------------------------------------------CC
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 4
s Elephantulus_edwardii.JH947257.1                         1227120 38 +  10337057 tca--------------------------------ga------------------------------tct-t-ttta-a--ctcc---agaactcAA-ACA-GCCAATGG------------------------
i Elephantulus_edwardii.JH947257.1                       I 19 C 0
s Enhydra_lutris.KZ291758.1                               24917507 43 +  41312741 tta--------------------------------ga------------------------------ttt-a-ttgg-a--ctcc---agagccAAA-AAT-GGCAGTAGA-ATTT------------------
i Enhydra_lutris.KZ291758.1                              I 20 I 28
s Eptesicus_fuscus.JH977646.1                             12580283 50 +  14770903 tca--------------------------------ga------------------------------tct-c-ttgg-a--cccc---agagccAAA-GAT-GGAGGTGGA-ATTT----------G-CTCACC
i Eptesicus_fuscus.JH977646.1                            I 20 I 3
s Equus_asinus.JREZ01000139.1                              3042825 50 -   4378816 tca--------------------------------ga------------------------------tct-g-ctgg-a--ctcc---agagcTAAA-ACT-GGCAGTGGG-ATTT----------G-CTCACC
i Equus_asinus.JREZ01000139.1                            I 20 I 22
s Equus_caballus.CM000403.2                               21376764 50 +  39960074 tca--------------------------------ga------------------------------tct-g-ctgg-g--ctcc---agagcTAAA-ACT-GGCAGTGGG-ATTT----------G-CTCACC
i Equus_caballus.CM000403.2                              I 20 I 22
s Equus_przewalskii.KK951119.1                              412746 50 -    498745 tca--------------------------------ga------------------------------tct-g-ctgg-a--ctcc---agagcTAAA-ACT-GGCAGTGGG-ATTT----------G-CTCACC
i Equus_przewalskii.KK951119.1                           I 20 I 22
s Erinaceus_europaeus.JH835339.1                           3667521 48 +   7059049 TCA--------------------------------GA------------------------------TCT-T-TTGG-C--CT--TC-AAAGCTTAA-A-T-GACAGTGG--ATTT----------G-CTAACG
i Erinaceus_europaeus.JH835339.1                         I 20 I 35
s Erythrocebus_patas.Contig38                               264943 50 +  21539334 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72535 50 -    133382 TCA--------------------------------GA------------------------------TCT-G-TTGG-A--CTCC---ACACCCAAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 22 I 22
s Eubalaena_japonica.EubJap_flattened_line_57114               248 50 +     25849 TCA--------------------------------GA------------------------------TCT-G-TTGG-A--CTCC---ACACCCAAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Eubalaena_japonica.EubJap_flattened_line_57114         I 22 I 22
s Eulemur_albifrons.k141_51491                               16509 80 -     24895 tcataggaacatcagaatagtgc-ttc-agactcaga------------------------------tct-g-tttg-a--ccca---ggagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               44218 80 -     70999 tcataggaacatcagaatagtgc-ttc-agactcaga------------------------------tct-g-tttg-a--ccca---gaagccAAA-ACT-GTCAGTGGA-ATTT----------G-CTTGCC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              88189 80 +    112731 tcataggaacatcagagtagtgc-ttc-agactcaga------------------------------tct-g-tttg-a--ccca---ggagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44752 80 +     68309 tcataggaacatcagagtagtgc-ttc-agactcaga------------------------------tct-g-tttg-a--ccca---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 55076 80 -     65740 tcataggaacatcagaatagtgc-ttc-agactcaga------------------------------tct-g-tttg-a--ccca---ggagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25708 80 -     75513 tcataggaacatcagagtagtgc-ttc-agactcaga------------------------------tct-g-tttg-a--ccca---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 49903 80 -     97555 tcataggaacatcagagtagtgc-ttc-agactcaga------------------------------tct-g-tttg-a--ccca---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6627 80 +     30972 tcataggaacatcagagtagtg--tttcagactcagt------------------------------tct-g-tttg-a--ccca---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44346 80 -     52037 tcataggaacatcagaatagtgc-ttc-agactcaga------------------------------tct-g-tttg-a--ccca---ggagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60750 80 -    111500 tcataggaacatcagaatagtgc-ttc-agactcaga------------------------------tct-g-tttg-a--ccca---ggagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248217 44 - 206538554 TAA--------------------------------GA------------------------------TTTTT-TTGG-A--CTCC---AGAGCCAAA-AAT-GGCAGTGGA-ATTT------------------
i Felis_catus.CM001381.2                                 I 20 I 28
s Felis_catus_fca126.CM031415.1                          185118003 44 - 205367284 TAA--------------------------------GA------------------------------TTTTT-TTGG-A--CTCC---AGAGCCAAA-AAT-GGCAGTGGA-ATTT------------------
i Felis_catus_fca126.CM031415.1                          I 20 I 28
s Felis_nigripes.FelNig_flattened_line_31944                 29103 44 -     30238 TAA--------------------------------GA------------------------------TTTTT-TTGG-A--CTCC---AGAGCCAAA-AAT-GGTAGTGGA-ATTT------------------
i Felis_nigripes.FelNig_flattened_line_31944             I 20 I 28
s Fukomys_damarensis.KN121974.1                            2923882 47 -   3816255 TCT--------------------------------GA------------------------------TCT-G-TTGG-A--CT-A---AGAACCAAA-ACT-A--AGTAAA-ATGT----------G-CTTGTT
i Fukomys_damarensis.KN121974.1                          I 27 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                3169 50 -     28519 tca--------------------------------ga------------------------------tct-g-tttg-a--ctcc---agagccAAA-ACT-GGCAGTGGA-Attt----------a-cttgct
i Galeopterus_variegatus.GalVar_scaffold_51812           I 30 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93226 50 -     95226 tct--------------------------------ga------------------------------tct-g-ttgg-a--ctct---agagccAAC-ACT-GGCAGTGGG-ATTT----------G-CTCACC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 20 I 22
s Glis_glis.GliGli_scaffold_163929                            3058 50 -      6791 tca--------------------------------ga------------------------------cct-g-tttg-a--ctcc---agagccAAA-ATT-GGCAGTGAA-ATTT----------G-CTTGCT
i Glis_glis.GliGli_scaffold_163929                       I 33 C 0
s Gorilla_beringei.k141_3586045                              19706 50 -     19819 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---ACAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Gorilla_beringei.k141_3586045                          I 37 C 0
s Gorilla_gorilla.LT578341.1                                258124 50 - 186649187 tca--------------------------------GA------------------------------TCT-G-TTTG-A--Cctc---acagccaaa-act-ggcagtgga-attt----------g-catgtt
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    4127 50 -     78134 tca--------------------------------ga------------------------------tct-g-tttg-a--ctcc---agagccAAA-ACT-GGCAGTGAA-ATTT----------G-CTTGCC
i Graphiurus_murinus.GraMur_scaffold_10447               I 30 C 0
s Hapalemur_alaotrensis.k141_330369                          16437 80 -     40692 tcataggaacatcaaagtagtgc-ttc-agactcaga------------------------------tct-g-tttg-a--ccca---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37836 80 +     49394 tcataggaacatcaaagtagtgc-ttc-agactcaga------------------------------tct-g-tttg-a--ccca---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62707 80 -     66874 tcataggaacatcaaagtagtgc-ttc-agactcaga------------------------------tct-g-tttg-a--ccca---agagcAAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11578 80 -     42923 tcataggaacatcaaagtagtgc-ttc-agactcaga------------------------------tct-g-tttg-a--ccca---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18580 80 -     53142 tcataggaacatcaaagtagtgc-ttc-agactcaga------------------------------tct-g-ttta-a--ccca---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32195 43 -    327341 tcg--------------------------------ga------------------------------cta-t-ttgg-a--ctcc---agagccAAA-TAT-GACAGTGGA-ATTT------------------
i Helogale_parvula.HelPar_flattened_line_2585            I 20 I 28
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10892 50 +     48891 tct--------------------------------ga------------------------------tct-g-tcgg-a--ctcc---agagccAAC-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 20 I 22
s Heterocephalus_glaber.JH602082.1                         1934268 49 -  22651954 TCT--------------------------------AA------------------------------TCT-G-TTGG-A--CT-C---AGAACCAAA-TCT-AACAGTGAA-ATTT----------G-CTTGTt
i Heterocephalus_glaber.JH602082.1                       I 29 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1649 24 +      8654 ---------------------------------------------------------------------------------ctcc---ataacccAA-ACT-GTCAGTAG------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 32 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                9036 49 -     36432 tt---------------------------------ga------------------------------tct-g-ttgg-a--ctcc---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 21 I 22
s Hipposideros_armiger.JXIK01000431.1                      1553033 50 -   1711038 ttg--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---agagccAAA-ACTGG-CAGTGGA-AATT----------G-CTCACC
i Hipposideros_armiger.JXIK01000431.1                    I 20 I 22
s Hipposideros_galeritus.HipGal_scaffold_164997               2470 50 -      2730 ttg--------------------------------gg------------------------------tct-g-ttgg-a--ctcc---agagcAAAA-ACTGG-CAGTGGA-AATT----------G-CTCACC
i Hipposideros_galeritus.HipGal_scaffold_164997          I 20 N 0
s Hoolock_leuconedys.ctg274                                    144597 50 -    630532 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGAAGTGGA-ATTT----------G-CATGTT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71561 43 +     83186 tga--------------------------------ga------------------------------ttt-t-ttgg-a--ctcc---agagACAAA-AAT-GGCAGTGGA-ATTT------------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 20 I 24
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73523 49 +    143317 TCC--------------------------------AA------------------------------CCT-G-TTGG-A--CT-C---AGAACCAAG-ACG-AGCAGTGAA-ATTT----------G-CTTGTT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 30 C 0
s Hylobates_agilis.k141_1155965                               7628 50 +     12352 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGAAGTGGA-ATTT----------G-CATGTT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14813 50 +     55766 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGAAGTGGA-ATTT----------G-CATGTT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054343 50 + 191637585 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGAAGTGGA-ATTT----------G-CATGTT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803221 50 +  11177569 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGAAGTGGA-ATTT----------G-CATGTT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9436 48 -    135385 TCT--------------------------------GA------------------------------TCT-G-TTGG-A--CT-C---AGAAC-AAA-AGT-AGCAGTGGA-GTTT----------G-CTTGTT
i Hystrix_cristata.HysCri_scaffold_5660                  I 30 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388612 50 +   7955117 TCA--------------------------------GA------------------------------TCT-G-TTGG-A--AGCC---ATAGCCAAA-ACT-GGCAGTGAA-ATTC----------A-CTTGTG
i Ictidomys_tridecemlineatus.JH393364.1                  I 30 C 0
s Indri_indri.k141_2415743                                    4116 80 +     11955 tcataggaacatcagaatagtgc-ttt-agactcaga------------------------------tgt-g-tttg-a--ccca---agagccAAA-GGT-GGCAGTGGA-ATTT----------T-CTTGCC
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11430 50 -     16823 TCA--------------------------------GA------------------------------TCT-G-TTGG-A--CTCC---ACACCCAAA-ATT-GGCAGTGGA-ATTT----------G-CTCACC
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 22 I 22
s Jaculus_jaculus.JH725527.1                               1241506  2 +   9596543 ------------------------------------------------------------------------------------------------------------------------------------ct
i Jaculus_jaculus.JH725527.1                             C 0 I 4
s Kogia_breviceps.KogBre_flattened_line_3970                 73268 50 -     97402 TTA--------------------------------GA------------------------------TCT-G-TTGG-A--CTCC---ACACCCAAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Kogia_breviceps.KogBre_flattened_line_3970             I 22 I 22
s Lasiurus_borealis.LasBor_scaffold_16567                    64581 49 -     65777 tca--------------------------------ga------------------------------tct-c-ttgg-a--cccc---agagccAAA-GCT-GGTGGTGGC-ATTT----------G--TCACC
i Lasiurus_borealis.LasBor_scaffold_16567                I 20 I 3
s Lemur_catta.scaffold_24                                 14761234 80 +  30322482 tcataggagcatcaaagtagtgc-ttc-agacttaga------------------------------tct-g-tttg-a--ccca---agagccAAA-ACT-GGCAGCGGA-AGTT----------G-CTTGCC
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10742 80 +     29618 tcataggaatatcagagtagtgc-ttt-aaacttaga------------------------------tct-g-tttg-a--ccca---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10738 80 +     31569 tcataggaatatcagagtagtgc-ttt-aaacttaga------------------------------tct-g-tttg-a--ccca---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Lepilemur_dorsalis.k141_387009                         C 0 I 10
s Lepilemur_ruficaudatus.k141_330196                         10748 80 +     24756 tcataggaatatcagagtagtgc-ttt-aaacttaga------------------------------tct-g-tttg-a--ccca---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10748 90 +     16388 tcataggaatatcagagtagtgc-ttt-aaacttaga------------------------------tct-g-tttg-g--ccca---agagccAAA-ACT-GGCAGTGGA-ATTTGCTTGCCAATG-CTTGCC
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        814898 43 -   3914936 tca--------------------------------ga------------------------------ttt-g-ttgg-a--ctcc---agagccAAA-AAT-GGCAGTGGA-ATTT------------------
i Leptonychotes_weddellii.KB714746.1                     I 20 I 28
s Lipotes_vexillifer.KE559953.1                             342615 50 +    662738 tca--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---acacccaAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Lipotes_vexillifer.KE559953.1                          I 22 I 22
s Lophocebus_aterrimus.ctg367                               335878 50 -   1826925 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---TGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086315 24 +  43346337 ---------------------------------------------------------------------------------CTCT---AGAACTAAA-ACT-GCCAGTGG------------------------
i Loxodonta_africana.GL010049.1                          I 32 C 0
s Lycaon_pictus.CM007581.1                                41615934 43 +  59628241 tca--------------------------------ga------------------------------ttt-g-ttgg-a--ctcc---agagccAAA-AAT-GGCAGTGGA-ATTT------------------
i Lycaon_pictus.CM007581.1                               I 20 I 28
s Macaca_arctoides.k141_1757516                              47270 50 -     61512 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374932 50 -  60120075 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27200 50 +     30207 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACG-GGCAGTGGA-ATTT----------G-CATGTT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2038 50 -      5035 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACG-GGCAGTGGA-ATTT----------G-CATGTT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27153 50 +     30527 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACG-GGCAGTGGA-ATTT----------G-CATGTT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38329 50 -     50087 tca--------------------------------GA------------------------------TCC-G-TCTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48074 50 +     51645 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417276 50 - 187317192 TCA--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACG-GGCAGTGGA-ATTT----------G-CATGTT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401507 50 +  25927173 TCA--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50678 50 -     62418 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3209 50 +     14901 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47151 50 +     59329 tca--------------------------------GA------------------------------TCC-G-TCTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273058 50 +    668171 tca--------------------------------GA------------------------------TCC-G-TCTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1690 50 -      5049 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4856 50 +     17132 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224659 14 -    270270 ------------------------------------------------------------------------------------------------------------GGA-ATTT----------G-CTCACC
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 19 I 22
s Mandrillus_leucophaeus.scaffold280                        324346 50 +  24302211 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359177 50 -    752769 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             674942 50 -    737560 tca--------------------------------ga------------------------------tct-g-ttag-g--ctgc---agaaccAAA-ACC-GGCAGTGGA-GTTT----------G-CTCACC
i Manis_javanica.JSZB01003497.1                          I 20 I 22
s Manis_pentadactyla.KN006162.1                             222242 50 +    317179 tca--------------------------------ga------------------------------tct-g-ttag-a--ctgc---agaaccAAA-ACC-GGCAGTGGA-ATTT----------G-CTCACC
i Manis_pentadactyla.KN006162.1                          I 20 I 22
s Marmota_marmota.CZRN01000018.1                           7502825 50 +  40650429 TCA--------------------------------GA------------------------------TCT-G-TTGG-A--TGAC---ACAGCCAAA-ACT-GGCAGTGAA-ATTC----------A-CTTGTG
i Marmota_marmota.CZRN01000018.1                         I 30 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151784 49 +    207569 TGG--------------------------------GA------------------------------TCT-G-TTGG-A--CTCT---GGAGCCAAA-ACA-G-TAGTGGA-ATTT----------G-TTCACC
i Megaderma_lyra.MegLyr_scaffold_4542                    I 19 I 22
s Meriones_unguiculatus.MerUng_scaffold_7390                 52274  2 -    140813 ------------------------------------------------------------------------------------------------------------------------------------CC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 4
s Mellivora_capensis.MelCap_flattened_line_19308             27626 43 -     74585 TCA--------------------------------TA------------------------------TTT-A-TTGG-A--CTCT---AGAGCCAAA-AAT-GGCAGTAGA-ATTT------------------
i Mellivora_capensis.MelCap_flattened_line_19308         I 20 I 28
s Mesoplodon_bidens.MesBid_scaffold_6114                     88899 50 +     93471 TCA--------------------------------GA------------------------------TCT-G-TTGG-G--CTCC---ACACCCAAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 22 I 22
s Microcebus_murinus.CM007674.1                           74986580 73 +  93316391 TCATAGGAACATCAGAGTAGTGC-TTT-AAACTCAGA------------------------------TCT-G-TTTG-A--CCCA---A-------A-ACT-GGCAGTGCA-ATTT----------G-CTTGCC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48099 38 +    145209 TCA--------------------------------GA------------------------------GAT-T-TTGG-G--CTCG---AAAACTCGC-ACC-GTCCAGGG------------------------
i Microgale_talazaci.MicTal_scaffold_6613                I 19 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186480 51 +    200668 tct--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---agagccATAAATG-GGCAGCGGC-ATTT----------G-CTCACC
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 20 I 3
s Microtus_ochrogaster.CM001695.1                         15965334  2 +  27267610 ------------------------------------------------------------------------------------------------------------------------------------AC
i Microtus_ochrogaster.CM001695.1                        C 0 I 4
s Miniopterus_natalensis.LDJU01000034.1                    6364628 50 -   8254450 tca--------------------------------ga------------------------------tct-g-ttgg-a--cccc---agaaccAAA-ATT-GGTGGTGTC-ATTT----------G-CTCACC
i Miniopterus_natalensis.LDJU01000034.1                  I 20 I 3
s Miniopterus_schreibersii.MinSch_scaffold_23309             43548 50 -     48117 TCA--------------------------------GA------------------------------TCT-G-TTGG-A--CCCC---AGAACCAAA-ATT-GGTGGTGTC-ATTT----------G-CTCACC
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 20 I 3
s Miopithecus_ogouensis.k141_1534655                         24444 50 -     27822 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9909 43 +     27589 TCA--------------------------------GA------------------------------TTT-G-TTGG-A--CTCC---AGAGCCAAA-AAT-GGCAGTGGA-ATTT------------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 20 I 28
s Mirza_zaza.k141_766280                                     54355 80 -     62432 tcacaggaacatcagagtagtgc-ttt-aaactcaga------------------------------tct-g-tttg-a--ccca---agagccAAA-ACT-GGCAGTGCA-ATTT----------G-CTTGCC
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   361004 50 +    437263 TCA--------------------------------GA------------------------------TCT-G-TTGG-A--CTCC---ACACCCAAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Monodon_monoceros.MonMon_M_scaffold_103                I 22 I 22
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180725 50 +    366855 tca--------------------------------gg------------------------------tct-g-ttgg-a--ctcc---agagccGTA-ACT-GACAGTGGC-ATTT----------G-CTCAGT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 20 I 3
s Moschus_moschiferus.MosMos_scaffold_13123                  27337 50 -     82753 tct--------------------------------ga------------------------------tct-g-ctgg-a--ctcc---ggagccAAC-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Moschus_moschiferus.MosMos_scaffold_13123              I 20 I 22
s Mungos_mungo.MunMun_flattened_line_18455                   19925 43 -     63510 TCG--------------------------------GA------------------------------TTA-T-TTGG-A--CTCC---AGAGCCAAA-TAT-GGCAGTGGA-ATTT------------------
i Mungos_mungo.MunMun_flattened_line_18455               I 16 I 28
s Murina_feae.MurFea_scaffold_17764                          42580 50 +     47283 tca--------------------------------ga------------------------------tct-c-ttgg-a--cccc---agacccAAA-GCT-GGTGGTGGC-ATTT----------G-CTCACC
i Murina_feae.MurFea_scaffold_17764                      I 15 I 3
s Mus_caroli.LT608237.1                                   35596513  2 + 120012414 ------------------------------------------------------------------------------------------------------------------------------------CC
i Mus_caroli.LT608237.1                                  C 0 I 4
s Mus_musculus.chr8                                       41689686  2 + 129401213 ------------------------------------------------------------------------------------------------------------------------------------CC
i Mus_musculus.chr8                                      C 0 I 4
s Mus_pahari.LT608297.1                                   58217992  2 +  89631738 ------------------------------------------------------------------------------------------------------------------------------------CC
i Mus_pahari.LT608297.1                                  C 0 I 4
s Mus_spretus.CM004101.1                                  39498971  2 + 130317789 ------------------------------------------------------------------------------------------------------------------------------------CC
i Mus_spretus.CM004101.1                                 C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_5560               1124 50 -    124358 TCG--------------------------------GA------------------------------TCT-A-TTTG-A--CTCC---AGAGCCAAA-ACT-GGCAGTGCA-ATTT----------G-CTTGCC
i Muscardinus_avellanarius.MusAve_scaffold_5560          I 24 C 0
s Mustela_putorius.JH418006.1                             14356525 43 +  14710649 TCA--------------------------------GA------------------------------TTT-A-TTGG-A--CTCC---AGAGCCAAA-AAT-GGCAGTAGA-ATTT------------------
i Mustela_putorius.JH418006.1                            I 20 I 28
s Myocastor_coypus.MyoCoy_scaffold_15261                     64829 49 +     67721 TTC--------------------------------AA------------------------------TCT-G-TTGG-A--CT-C---AGAAGAAAA-ACT-AGTGGTGAA-ATTG----------G-CTTGCT
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 26 C 0
s Myotis_brandtii.KE162005.1                               9794847 50 +  10118263 tca--------------------------------ga------------------------------tct-c-ttgg-a--cccc---agagccAAA-GCT-GGTGGTGGC-ATTT----------G-CTCACC
i Myotis_brandtii.KE162005.1                             I 20 I 3
s Myotis_davidii.KB100139.1                                4389022 50 +   6019432 tca--------------------------------ga------------------------------tct-c-ttgg-a--cccc---agagccAAA-GCT-GGTGGTGGC-ATTT----------G-CTCACC
i Myotis_davidii.KB100139.1                              I 20 I 3
s Myotis_lucifugus.GL429869.1                               385050 50 +   4330536 tca--------------------------------ga------------------------------tct-c-ttgg-a--cccc---agagccAAA-GCT-GGTGGTGGC-ATTT----------G-CTCACC
i Myotis_lucifugus.GL429869.1                            I 20 I 3
s Myotis_myotis.MyoMyo_scaffold_66571                         3835 50 +     18357 TCA--------------------------------GA------------------------------TCT-C-TTGG-A--CCCC---AGAGCCAAA-GCT-GGTGGTGGC-ATTT----------G-CTCACC
i Myotis_myotis.MyoMyo_scaffold_66571                    I 20 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121156 50 +    130748 TCA--------------------------------GC------------------------------TCT-G-TCTG-A--CTTC---AGAGCCAAA-ACT-GGCATTGCT-CTTT----------G-CTTACC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 13 I 7
s Nannospalax_galili.KL204047.1                             948156  2 +   3037898 ------------------------------------------------------------------------------------------------------------------------------------CA
i Nannospalax_galili.KL204047.1                          C 0 I 4
s Nasalis_larvatus.k141_1350636                              31221 50 +     34575 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233670 50 -   7148211 tca--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---acacccaAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Neophocaena_asiaeorientalis.KZ687982.1                 I 22 I 22
s Noctilio_leporinus.NocLep_scaffold_7894                   129319 50 -    149072 tca--------------------------------ga------------------------------tct-g-atgg-a--cccc---agagccaTA-ACT-GGCAGTGGC-ATTT----------G-CATACC
i Noctilio_leporinus.NocLep_scaffold_7894                I 3 I 3
s Nomascus_annamensis.k141_1771965                           55515 50 -    132029 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGAAGTGGA-ATTT----------G-CATGTT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11624 50 -     16345 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGAAGTGGA-ATTT----------G-CATGTT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17509 50 +     22201 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGAAGTGGA-ATTT----------G-CATGTT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415730 50 -  22158432 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGAAGTGGA-ATTT----------G-CATGTT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27907 50 -     54323 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGAAGTGGA-ATTT----------G-CATGTT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199530 43 +   9404916 tca--------------------------------ga------------------------------ttt-g-ttgg-a--ctcc---agagccAAA-AAT-GGAAGTGGA-ATTT------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 20 I 28
s Octodon_degus.JH651603.1                                11056926 49 -  11899542 TTC--------------------------------AA------------------------------TCT-G-TTGG-A--CT-C---AGAAGCAAA-ATT-AGCAGTGGA-ACTG----------G-CTTGCT
i Octodon_degus.JH651603.1                               I 26 C 0
s Odobenus_rosmarus.KB229312.1                             1453326 43 +   2017862 tca--------------------------------ga------------------------------ttt-g-ttgg-a--ctcc---agagccAAA-AAT-GGCAGTGGA-ATTT------------------
i Odobenus_rosmarus.KB229312.1                           I 20 I 28
s Odocoileus_virginianus.KZ100018.1                         438424 50 -    630418 tct--------------------------------ga------------------------------tct-g-tcgg-a--ctcc---agagccAAC-ACT-GTCAGTGGA-ATTT----------G-CTCACC
i Odocoileus_virginianus.KZ100018.1                      I 20 I 22
s Okapia_johnstoni.LVCL01S0005463.1                          16307 50 +    150152 tct--------------------------------ga------------------------------tct-g-ttgg-a--ctct---agagcTAAC-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Okapia_johnstoni.LVCL01S0005463.1                      I 20 I 22
s Ondatra_zibethicus.OndZib_scaffold_7387                    95953  2 -    140218 ------------------------------------------------------------------------------------------------------------------------------------CC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_28377                    6532  2 -     41509 ------------------------------------------------------------------------------------------------------------------------------------CC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 4
s Orcinus_orca.KB316932.1                                  8104073 50 +  10937097 TCA--------------------------------TT------------------------------TTT-T-TTGG-A--CTCC---ACACCCAAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Orcinus_orca.KB316932.1                                I 22 I 22
s Orycteropus_afer.OryAfe_flattened_line_201229               1370 39 +     11607 TCA--------------------------------GA------------------------------TCT-TTTTTG-A--CTCT---AGAACCCAA-GCT-ACCAGTGC------------------------
i Orycteropus_afer.OryAfe_flattened_line_201229          I 19 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40576 43 +    559221 tca--------------------------------ga------------------------------ttt-g-ttgg-a--ctcc---agagccAAA-AAT-GGCAGTGGA-ATTT------------------
i Otocyon_megalotis.JAEUCK010005147.1                    I 20 I 28
s Ovis_aries.CM001607.2                                   26406019 50 -  44047080 tct--------------------------------ga------------------------------tct-g-tcgg-a--ctcc---agagccAAC-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Ovis_aries.CM001607.2                                  I 20 I 22
s Ovis_canadensis.OviCan_scaffold_67953                       6538 50 +     17875 tct--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---agagccAAC-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Ovis_canadensis.OviCan_scaffold_67953                  I 20 I 22
s Pan_paniscus.AJFE02004362.1                                  925 50 +      1339 TCA--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---ACAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.KZ622849.1                                 36864 50 -    110857 TCA--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---ACAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Pan_troglodytes.KZ622849.1                             I 66 I 463
s Panthera_onca.PanOnc_flattened_line_3271                   25926 44 -    230217 taa--------------------------------ga------------------------------ttttt-ttag-a--ctcc---agagccAAA-AAT-GGCAGTGGA-ATTT------------------
i Panthera_onca.PanOnc_flattened_line_3271               I 20 I 28
s Panthera_pardus.KV860321.1                              18463252 44 -  18783137 TAA--------------------------------GA------------------------------TTTTT-TTGG-A--CTCC---AGAGCCAAA-AAT-GGCAGTGGA-ATTT------------------
i Panthera_pardus.KV860321.1                             I 20 I 28
s Panthera_tigris.KE722367.1                               3973911 44 +   8748460 TAA--------------------------------GA------------------------------TTTTT-TTGG-A--CTCC---AGAGCCAAA-AAT-GGCAGTGGA-ATTT------------------
i Panthera_tigris.KE722367.1                             I 20 I 28
s Pantholops_hodgsonii.KE114653.1                          1617544 50 +   2937107 tct--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---agagccAAC-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Pantholops_hodgsonii.KE114653.1                        I 20 I 22
s Papio_anubis.CM001495.2                                   245355 50 - 183742232 TCA--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11640 50 +     21308 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294383 50 -  20919399 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24280 50 -     27687 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                     959 50 +     10553 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   919 50 -     10386 tca--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16510 41 +     78924 TCA--------------------------------G--------------------------------TT-T-TTGG-A--CTCC---AGAGCCAAA-AAT-GGCAGTGGA-ATTT------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 21 I 28
s Perognathus_longimembris.PerPac_flattened_line_89005        3652 50 +      9367 TCA--------------------------------AA------------------------------CTT-G-TCAT-A--CCTC---AGAGCCAAA-ATT-AGCAGTGAA-ATTT----------G-TATTCT
i Perognathus_longimembris.PerPac_flattened_line_89005   I 30 C 0
s Peromyscus_maniculatus.KI615324.1                         249738  2 +  18517816 ------------------------------------------------------------------------------------------------------------------------------------CC
i Peromyscus_maniculatus.KI615324.1                      C 0 I 4
s Petromus_typicus.PetTyp_scaffold_17301                     33804 49 -     56120 TCT--------------------------------GA------------------------------TCT-G-CTGG-A--CT-C---AGAACCAAA-ACC-AGCGGTGAAAATAT----------G-C-TCTT
i Petromus_typicus.PetTyp_scaffold_17301                 I 30 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5598 50 -     63832 tca--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---acacccaAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 22 I 22
s Piliocolobus_badius.k141_2704958                            4603 50 +     55023 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4125 50 -     89929 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4715 50 +     40849 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256445 50 +  14605196 TCA--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5415 50 +     22231 TCA--------------------------------GA------------------------------TCT-C-CTGG-A--CCCC---AGAGCCAAA-GAT-GGTGGTGGC-ATTT----------G-CTCACC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 20 I 3
s Platanista_gangetica.PlaMin_flattened_line_83166            2615 50 +     19503 TCA--------------------------------GA------------------------------TCT-G-TTGG-A--CTCC---ACACCCAAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Platanista_gangetica.PlaMin_flattened_line_83166       I 22 I 22
s Pongo_abelii.CM009266.2                                   181283 50 - 189387572 TCA--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---ACAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196023 50 -   9816681 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---ACAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29803 50 +     69807 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GTCAGTGGA-ATTT----------G-CATGCT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              46984 50 -     80239 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5640 24 +      7663 ---------------------------------------------------------------------------------ctcc---ataacccAA-ACT-ATCAGTAG------------------------
i Procavia_capensis.ProCapCap_scaffold_165387            I 32 C 0
s Prolemur_simus.MPIZ01000396.1                            1984382 80 +   4620579 TCATAGGAACATCAAAGTAGTGA-TTC-AGACTCAGA------------------------------TCT-G-TTTG-A--CCCA---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CTTGCC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567868 80 -   2598838 TCATAGGAACATCAGAGTAGTGC-TTT-AGACTCAAA------------------------------TCC-G-TTTG-A--GCCA---AGAGCCCAA-ACT-TGCAGTGGA-ATTT----------T-CTTGCC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5506 80 -      7103 tcatagGAACATCAGAGTAGTGC-TTT-AGACTCAAA------------------------------TCC-A-TTTG-A--GCCA---AGAGCCCAA-ACT-TGCAGTGAA-ATTT----------T-CTTGCC
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             6103 80 -     11706 tcataggaacatcagagtagtgc-ttt-agactcaaa------------------------------tcc-g-tttg-a--gcca---agagcccAA-ACT-TGCAGTGGA-ATTT----------T-CTTGCC
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9840 80 -     30655 tcataggaacatcagagtagtgc-ttt-agactcaaa------------------------------tcc-g-tttg-a--gcca---agagcccAA-ACT-TGCAGTGGA-ATTT----------T-CTTGCC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          36154 80 +     46564 tcataggaacatcagagtagtgc-ttt-agactcaaa------------------------------tcc-g-tttg-a--gcca---agagcccAA-ACT-TGCAGTGGA-ATTT----------T-CTTGCC
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96433 80 -     98465 tcacaggaacatcagagtagtgc-ttt-agactcaaa------------------------------tcc-g-tttg-a--gcca---agagcccAA-ATT-TGCAGTGGA-ATTT----------T-CTTGCC
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                         10072 80 +     35169 tcatagGAACATCAGAGTAGTGC-TTT-AGACTCAAA------------------------------TCC-A-TTTG-A--GCCA---AGAGCCCAA-ACT-TGCAGTGGA-ATTT----------T-CTTGCC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39797  2 +     52041 ------------------------------------------------------------------------------------------------------------------------------------CC
i Psammomys_obesus.NESX01036366.1                        C 0 I 4
s Pteronotus_parnellii.KE847780.1                            53618 50 -     66298 tca--------------------------------aa------------------------------tct-g-ttgg-a--ctcc---agagccATG-ACT-GACAGTGGC-ATTT----------G-TTCAGG
i Pteronotus_parnellii.KE847780.1                        I 20 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6104 43 -     18639 tta--------------------------------ga------------------------------ttt-a-ttgg-a--ctcc---agagccAAA-AAC-GGCAGTAGA-ATTT------------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 20 I 28
s Pteropus_alecto.KB030862.1                               5842230 50 -  28871421 tta--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---agagccAAA-ACT-GGCCGTGGA-ATTT----------G-CTCGCC
i Pteropus_alecto.KB030862.1                             I 20 I 22
s Pteropus_vampyrus.KN525825.1                             3538745 50 -   4952924 tta--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---agagccAAA-ACT-GGCCGTGGA-ATTT----------G-CTCGCC
i Pteropus_vampyrus.KN525825.1                           I 20 I 22
s Puma_concolor.QAVW01001104.1                            18100566 44 +  38429054 TAA--------------------------------GA------------------------------GTTTT-TTGG-A--CTCC---AGAGCCAAA-AAT-GGCAGTGGA-ATTT------------------
i Puma_concolor.QAVW01001104.1                           I 20 I 28
s Pygathrix_cinerea.k141_1153803                             29170 50 +     91421 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155722 50 -   7812017 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10027 50 +     72585 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   469 50 -     55207 tct--------------------------------ga------------------------------tct-g-tcgg-a--ctcc---agagccAAC-ACT-GTCAGCGGA-ATTT----------G-CTTACC
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 20 I 22
s Rattus_norvegicus.chr16                                 37024699  2 -  90668790 ------------------------------------------------------------------------------------------------------------------------------------CC
i Rattus_norvegicus.chr16                                C 0 I 4
s Rhinolophus_sinicus.LVEH01000134.1                       2916184 51 +   3329780 ttg--------------------------------ga------------------------------tct-g-ttggca--ctcc---agagccAAA-ACTGG-CAGTGGA-AATT----------G-CTCACC
i Rhinolophus_sinicus.LVEH01000134.1                     I 19 I 22
s Rhinopithecus_bieti.k119_778604                             3634 48 +      7119 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC-----AGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124304 48 + 195417433 TCA--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC-----AGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238476 48 -   7961872 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC-----AGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76730 50 -    116970 TAC--------------------------------AA------------------------------TCT-G-TTGG-A--CTCT---AGAGCCAAA-ACT-GGCCGTGGA-ATTT----------G-CTCACC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 20 I 22
s Saiga_tatarica.SaiTat_scaffold_39512                        9701 50 +     16473 TCT--------------------------------GA------------------------------TCT-G-TTGG-A--CTCC---AGACCCAAC-ACT-GGCAGTGGA-ATTT----------G-GTCACC
i Saiga_tatarica.SaiTat_scaffold_39512                   I 20 I 22
s Scalopus_aquaticus.ScaAqu_scaffold_662                    117037 50 +    313613 TTA--------------------------------GC------------------------------CTT-G-TTGA-ACTCC-----TTAACCAAA-ACT-GGCAGTGGA-ATTT----------G-GTCATC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 13 I 23
s Semnopithecus_entellus.k141_583282                           609 50 +     11297 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAACCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31002 50 +     58920 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAACCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17500 50 -     45317 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAACCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25158 50 -     42441 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAACCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27834 50 -     29113 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAACCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30911 50 -     48123 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAACCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51524  2 +     77746 ------------------------------------------------------------------------------------------------------------------------------------CT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 4
s Solenodon_paradoxus.SolPar_flattened_line_126            1865575 25 -   1910179 -----------------------------------------------------------------------------------------------AT-GTT-GGCAGCAGA-ATTT----------A-CTCACC
i Solenodon_paradoxus.SolPar_flattened_line_126          I 21 I 22
s Sorex_araneus.JH798187.1                                 4672647 50 +  18376816 TCA--------------------------------GA------------------------------TCT-G-TTGG-A--CT---CAAGAGCCTAA-TCT-GGCAGTGAT-ATTT----------G-TTTTCC
i Sorex_araneus.JH798187.1                               I 18 I 36
s Spermophilus_dauricus.KZ294078.1                         1870190 50 +   3870691 TCA--------------------------------GA------------------------------TCT-G-TTGG-A--AGCC---ATAGCCAAA-ACT-GGCAGTGAA-ATTC----------A-CTTGTG
i Spermophilus_dauricus.KZ294078.1                       I 30 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8179 43 -     97271 tca--------------------------------ga------------------------------tat-g-ttgg-a--ctcc---agagccAGA-AAT-GGCAGTGGA-ATTT------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 20 I 28
s Suricata_suricatta.SurSur_flattened_line_6629             126345 43 +    196729 TCG--------------------------------GA------------------------------TTA-T-TTGG-A--CTCC---AGAGCCAAA-TAT-GGCAGTGGA-ATTT------------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 20 I 28
s Sus_scrofa.CM000828.4                                    6645390 50 +  69701581 tca--------------------------------gg------------------------------tct-g-ttga-a--ctcc---agaatcAAA-ACT-GACAGTGGA-ATTT----------G-CTCACC
i Sus_scrofa.CM000828.4                                  I 21 I 22
s Symphalangus_syndactylus.tarseq_199                       392995 50 +   1523678 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGAAGTGGA-ATTT----------G-CATGTT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15758 50 +     22964 tca--------------------------------ga------------------------------tct-g-gtgg-a--ctcc---agagccAAA-ACT-GGCAGTGGC-ATTT----------T-CTCACC
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 20 I 3
s Tamandua_tetradactyla.TamTet_scaffold_224794                4158 50 +      5583 TCA--------------------------------GC------------------------------TCT-G-TCTG-A--CTTC---AGAGCCAAC-ACT-GGCATTGCT-CTTT----------G-CTTACC
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 13 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      193072 50 +    199430 TCA--------------------------------GA------------------------------TCT-G-TTGG-A--CTAC---AGAGCCAAA-ACT-GGTAGTGGA-ATTT----------G-CTCACC
i Tapirus_indicus.TapInd_scaffold_7432                   I 20 I 22
s Tapirus_terrestris.TapTer_scaffold_755                    107040 50 -    539355 TCA--------------------------------GA------------------------------TCT-G-TTGG-A--CTAC---AGAGCCAAG-GCT-GGTAGTGGA-ATTT----------G-CTCACC
i Tapirus_terrestris.TapTer_scaffold_755                 I 20 I 22
s Tarsius_lariang.k141_1733899                                2434 45 +      9917 taa--------------------------------tagcaacagcagagtagtgcttcagactgaagtct-g-tttc-a--c----------------------------------------------------
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9232 45 +     20590 tca--------------------------------tagcaacagcagagtagtgcttcagactgaagtct-g-tttc-a--c----------------------------------------------------
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355164 50 - 186847797 TCA--------------------------------GA------------------------------TCC-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26021 50 -     33621 TCT--------------------------------GA------------------------------TCT-G-TTGG-A--CT-C---AGAACCAAA-ACC-AGCAGTGAAGATGT----------G-CCACTT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 30 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21105 50 -     31044 TCA--------------------------------GG------------------------------TAT-G-TGTG-A--CCTC---AGAGCCAAA-ACT-GGCACTGGG-ATTT----------G-CTTACC
i Tolypeutes_matacus.TolMat_scaffold_31955               I 13 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481610 50 -    610378 tcc--------------------------------gg------------------------------tct-g-ttgg-g--ttcc---agagccatg-ATG-GGCAGTGGC-ATTT----------G-CTCATC
i Tonatia_saurophila.TonSau_scaffold_294                 I 20 I 3
s Trachypithecus_auratus.k141_1189070                        22912 50 +     26378 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35711 50 -     78344 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22237 50 +     25722 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30667 50 -     62838 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30656 50 +     46913 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAACCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11395 50 -     28527 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32602 50 -     64340 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAACCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30640 50 -     63452 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAACCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12087 50 +     22490 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5453 50 -      6147 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12366 50 -     13050 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257530 50 -   6242583 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAGCCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3626 50 +     19340 tca--------------------------------GA------------------------------TCT-G-TTTG-A--CCTC---AGAACCAAA-ACT-GGCAGTGGA-ATTT----------G-CATGTT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175320 48 -    200418 --T--------------------------------GA------------------------------TTT-G-CTGG-A--GTAC---AGAGACAAC-ACT-GGCAGTGGA-ATTT----------G-CTCACT
i Tragulus_javanicus.TraJav_scaffold_3462                I 20 I 22
s Trichechus_manatus.JH594705.1                            6483002 24 -  10818551 ---------------------------------------------------------------------------------CTCT---AGAACCAAA-AGT-GCCAATGG------------------------
i Trichechus_manatus.JH594705.1                          I 32 C 0
s Tupaia_chinensis.KB320699.1                              1837141 43 -   4065304 TCA--------------------------------GA------------------------------TAT-G-TTTG-A--CTCC---TGAGCCAAA-ATT-GGCAGTGGA-ATTT------------------
i Tupaia_chinensis.KB320699.1                            I 11 I 6
s Tupaia_tana.TupTan_flattened_line_394                      11191 43 -     70247 tca--------------------------------ga------------------------------tat-g-tttg-a--ctcc---tgagccAAA-ATT-GGCAGTGGA-ATTT------------------
i Tupaia_tana.TupTan_flattened_line_394                  I 30 I 6
s Tursiops_truncatus.MRVK01000835.1                       17367198 50 -  33153633 tca--------------------------------ga------------------------------tct-g-ttgg-a--ctcc---acacccaAA-ACT-GGCAGTGGA-ATTT----------G-CTCACC
i Tursiops_truncatus.MRVK01000835.1                      I 22 I 22
s Uropsilus_gracilis.UroGra_scaffold_46687                    4997 48 -     21056 TTA---------------------------------A------------------------------TCT-G-TTGC-A--TC-----TGAATCAAA-ACT-GGCAGTAGA-ATTT----------TGCTCATC
i Uropsilus_gracilis.UroGra_scaffold_46687               I 13 I 23
s Ursus_maritimus.KK499267.1                                183546 43 +   5085361 tca--------------------------------ga------------------------------ttt-g-ttgg-a--ctcc---atagccAAA-AAT-TGCAGTGGA-ATTT------------------
i Ursus_maritimus.KK499267.1                             I 20 I 28
s Varecia_rubra.k141_787544                                  27032 80 -     30710 tcataggaacatcagagtagtgc-ttc-agactcaga------------------------------tct-g-tttg-a--ccca---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CCTGCC
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              25939 80 -    147434 tcataggaacatcagagtagtgc-ttc-agactcaga------------------------------tct-g-tttg-a--ccca---agagccAAA-ACT-GGCAGTGGA-ATTT----------G-CCTGCC
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77742 36 +   5488506 ---------------------------------------------------------------------------------cttc---agagccAAA-ACC-AGCAGTGGA-ATTT----------G-CTCACC
i Vicugna_pacos.KN270157.1                               I 33 I 22
s Zapus_hudsonius.ZapHud_scaffold_286923                      1380  2 -      1899 ------------------------------------------------------------------------------------------------------------------------------------CT
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 I 4
s Vulpes_lagopus.VulLag_flattened_line_12041                106299 43 -    112863 TCA--------------------------------GA------------------------------TTT-G-TTGG-A--CTCC---AGAGCCAAA-AAT-GGCAGTGGA-ATTT------------------
i Vulpes_lagopus.VulLag_flattened_line_12041             I 20 I 28
s Xerus_inauris.XerIna_scaffold_2302                        175944  9 -    224448 TCA--------------------------------GA------------------------------TCT-G--------------------------------------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     I 30 I 7
s Zalophus_californianus.ZalCal_flattened_line_17732         30538 43 -     86975 TCA--------------------------------GA------------------------------TTT-G-TTGG-A--CTCC---AGAGCCAAA-AAT-GGCAGTGGA-ATTT------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 20 I 28
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Saimiri_ustus.k141_360372                                  31938  0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16784  0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29383  0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32692  0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       32306  0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110739  0 + 121099817 C
e Callibella_humilis.k141_1233062                            11864  0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Sapajus_macrocephalus.k141_796559                           9558  0 +     21866 C
e Sapajus_apella.ctg103                                     239968  0 +   5703754 C
e Saguinus_oedipus.k141_1368863                                616  0 +     10417 C
e Saguinus_mystax.k141_6319370                                1276  0 +     10149 C
e Saguinus_midas.LG03                                       394567  0 - 209938924 C
e Saguinus_labiatus.k141_264497                               3661  0 -      7443 C
e Saguinus_inustus.k141_4502137                                856  0 +      4564 C
e Saguinus_imperator.k141_2710097                            15976  0 -     24931 C
e Saguinus_geoffroyi.k141_356064                               373  0 +      9876 C
e Saguinus_bicolor.k141_161125                                8912  0 +     12412 C
e Plecturocebus_moloch.k141_1031110                          45651  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          44184  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      16258  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          9331  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          44283  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          9332  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44634  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       44240  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4836  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9754  0 +     39866 C
e Pithecia_vanzolinii.k141_1369553                           33337  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              558323  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33353  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33593  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               33317  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7569  0 -     25401 C
e Pithecia_albicans.k141_1239476                             66481  0 +    207309 C
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mico_schneideri.k141_1877700                                     20782  0 -     26561 C
e Mico_humeralifer.k141_1180625                              12463  0 -     12984 C
e Mico_argentatus.k141_582562                                11963  0 +     17804 C
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Leontopithecus_rosalia.k141_1583055                         5369  0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      567  0 +      8855 C
e Leontocebus_nigricollis.k141_1320036                         377  0 +      3713 C
e Leontocebus_illigeri.k141_2759473                            734  0 -     14280 C
e Leontocebus_fuscicollis.k141_3470480                         421  0 -     23187 C
e Lagothrix_lagothricha.k141_246028                          44940  0 +    110728 C
e Cricetulus_griseus.LT883664.1                          213118042  0 - 224834208 C
e Chiropotes_sagulatus.k141_1113111                           9664  0 +     34062 C
e Chiropotes_israelita.k141_313004                           44113  0 -    112038 C
e Chiropotes_albinasus.k141_1091259                          33016  0 -     52013 C
e Cheracebus_torquatus.k141_890198                           21042  0 +     39636 C
e Cheracebus_regulus.k141_471822                             21253  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20998  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10585  0 -     32913 C
e Cebus_unicolor.k141_1654760                                68744  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9648  0 -     34880 C
e Cebus_albifrons.Contig27                                  374591  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44838  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6780  0 -     12580 C
e Callithrix_kuhlii.k119_102356                               3381  0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455859  0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3470  0 -      8861 C
e Callimico_goeldii.k141_1609886                             11377  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         22212  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  22299  0 +     95584 C
e Cacajao_calvus.k141_89051                                  44773  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9479  0 +     28062 C
e Ateles_paniscus.k141_866194                                24673  0 -     33135 C
e Ateles_marginatus.k141_970259                              50615  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              35246  0 +     44353 C
e Ateles_chamek.k141_615173                                   7690  0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12555  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276389  0 +  21539123 C
e Aotus_vociferans.k141_1514463                               3326  0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3767  0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673773  0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3491  0 -     15923 C
e Aotus_azarae.k141_887050                                    2866  0 +     17741 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Alouatta_seniculus.k141_928287                             34633  0 +     42133 C
e Alouatta_puruensis.k141_251022                             10499  0 +     30854 C
e Alouatta_palliata.k141_638677                              48326  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42677  0 +     45454 C
e Alouatta_macconnelli.k141_1277969                           1160  0 -      3959 C
e Alouatta_juara.k141_1687208                                44052  0 -     64179 C
e Alouatta_discolor.k141_2561099                             45595  0 +     55831 C
e Alouatta_caraya.k141_1109140                               46162  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73924  0 -     84148 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       9014 23 +     36723 G--C-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
s Acinonyx_jubatus.LLWD01001279.1                           814379 22 +   1699592 T--T-TCTTG-GA-ACAT-A-------CT-A-GTG---AC
i Acinonyx_jubatus.LLWD01001279.1                        I 28 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27706 13 +     63021 ---------------TAT-A------GAT-A-GTA---AT
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 4 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20417046 22 +  29979442 T--T-TCTTG-GA-ACAT-A-------CT-A-GTA---AC
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 28 C 0
s Ailurus_fulgens.LNAC01001112.1                            217166 22 +    347723 T--T-TCTTG-GA-ACAT-A-------CT-A-GTa---ac
i Ailurus_fulgens.LNAC01001112.1                         I 28 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19951 14 -     61208 ---------------TTA-A------GTCAA-GTA---AC
i Allactaga_bullata.AllBul_scaffold_20030                I 4 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49964 23 +     53615 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          1991 23 +     13857 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18546 23 -     21945 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20231 23 +     32033 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587224 23 +   2318259 T--T-TCTTG-ga-acat-a------gct-a-gta---at
i Ammotragus_lervia.NIVO01071767.1                       I 22 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52301 23 -     68529 T--T-TCTTA-GA-ACAT-A------GCT-A-GTA---AT
i Antilocapra_americana.AntAmePen_scaffold_21030         I 22 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25832 29 -     32367 A--T-TCCTG-GA-ACAT-AGCCATACCC-A-TTA---GT
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 12 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6884 15 -     15198 ------------A-ACAC-A------CCT-A-GTA---AG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 3 C 0
s Avahi_laniger.k141_2756659                                  8054 13 +     11645 A--T-TCCTG-GA-GCAT----------------------
i Avahi_laniger.k141_2756659                             C 0 I 9
s Avahi_peyrierasi.k141_1823318                               8062 13 -     19611 A--T-TCCTG-GA-GCAT----------------------
i Avahi_peyrierasi.k141_1823318                          C 0 I 9
s Balaenoptera_acutorostrata.KI537508.1                    7964993 23 -  23207421 T--T-TCTTG-GA-ACAT-A------GCT-A-gta---at
i Balaenoptera_acutorostrata.KI537508.1                  I 22 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1493 23 -     25979 T--T-TCTTG-GA-ACAT-A------GCT-A-GTA---AT
i Balaenoptera_bonaerensis.DF411050.1                    I 22 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88231 23 +    124022 T--T-TCTTG-ga-acat-a------gct-a-gta---at
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 22 C 0
s Bison_bison.KN261452.1                                     23760 23 +    288883 T--T-TCTTG-GA-ACAT-A------GCT-A-GTA---AT
i Bison_bison.KN261452.1                                 I 22 C 0
s Bos_indicus.CM003047.1                                  20358150 23 +  48749331 T--T-TCTTG-GA-ACAT-A------GCT-A-GTA---AT
i Bos_indicus.CM003047.1                                 I 22 C 0
s Bos_mutus.JH880303.1                                      756714 23 +   1948126 T--T-TCTTG-ga-acat-a------gct-a-gta---at
i Bos_mutus.JH880303.1                                   I 22 C 0
s Bos_taurus.CM000203.6                                   27546856 23 -  45695690 T--T-TCTTG-ga-acat-a------gct-a-gta---at
i Bos_taurus.CM000203.6                                  I 22 C 0
s Bubalus_bubalis.KI419123.1                               1531864 23 -   4408762 T--T-TCTTG-GA-ACAT-A------GCT-A-GTA---AT
i Bubalus_bubalis.KI419123.1                             I 22 C 0
s Camelus_bactrianus.KN276810.1                            7632464 23 +  17673402 t--t-tcctg-gc-acgt-a------act-a-ata---at
i Camelus_bactrianus.KN276810.1                          I 22 C 0
s Camelus_dromedarius.KN272107.1                           4666751 23 +   7040546 T--T-TCCTG-GC-ATGT-A------Act-a-ata---at
i Camelus_dromedarius.KN272107.1                         I 22 C 0
s Camelus_ferus.KB017975.1                                 1210409 23 +   1652518 t--t-tcctg-gc-acgt-a------act-a-ata---at
i Camelus_ferus.KB017975.1                               I 22 C 0
s CanFam4.chr16                                           42506736 22 +  60362399 T--T-TCTTG-GA-ACAT-A-------CT-A-ATA---AA
i CanFam4.chr16                                          I 28 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10372 22 -     23171 T--T-TCTTG-GA-ACAT-A-------CT-A-ATA---AA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 28 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223715 22 +   9314153 T--T-TCTTG-GA-ACAT-A-------Ct-a-ata---aa
i Canis_lupus_dingo.QKWQ01000480.1                       I 28 C 0
s Canis_lupus_familiaris.chr16                            41616850 22 +  59632846 T--T-TCTTG-GA-ACAT-A-------Ct-a-ata---aa
i Canis_lupus_familiaris.chr16                           I 28 C 0
s Canis_lupus_orion.HG994398.1                            45108431 22 -  63665305 T--T-TCTTG-GA-ACAT-A-------Ct-a-ata---aa
i Canis_lupus_orion.HG994398.1                           I 28 C 0
s Capra_aegagrus.CM003241.1                               27410953 23 -  46296322 T--T-TCTTG-ga-acat-a------gct-a-gta---at
i Capra_aegagrus.CM003241.1                              I 22 C 0
s Capra_hircus.CM004588.1                                 26593227 23 +  44709034 T--T-TCTTG-GA-ACGT-A------GCT-A-GTA---AT
i Capra_hircus.CM004588.1                                I 22 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1292 25 -      1607 AGGT-GGCTG-GA-GCAC-A------CCT-A-GTA---GC
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272602 23 +    496798 G--C-TCCTA-GC-TCAT-G------CCT-G-GTG---AT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1754 15 +      9923 ------------A-ACAC-A------CCT-A-GGA---AG
i Carollia_perspicillata.CarPer_scaffold_107871          I 3 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29483 23 -     39886 A--T-TCCTG-GT-ACAT-A------TCT-A-CTC---AT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     81064 23 -    217609 T--A-TCCTG-GG-ACAT-A------ACT-A-GTA---AT
i Catagonus_wagneri.CatWag_scaffold_2839                 I 22 C 0
s Cavia_aperea.AVPZ01000300.1                              4998162 23 +  23392119 A--T-TGCTG-TA-GCAA-A------CCT-A-GTa---gt
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001604 23 +  23407841 A--C-TGCTG-GA-GCAA-A------CCT-A-GTa---gt
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64683 23 -     66877 A--C-TGCTG-GA-GCAA-A------CCT-A-GTA---GT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4561 23 -      5494 G--C-TCCTA-GC-ACAT-G------CCT-G-GTG---AT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493694 23 -  27778364 T--t-tcctg-ga-acat-a------cct-a-gta---at
i Ceratotherium_simum.JH767749.1                         I 36 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20527 23 +     27315 T--T-TCCTG-GA-ACAT-A------CCT-A-GTA---AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 36 C 0
s Cercocebus_atys.KQ010504.1                                143046 23 -   4669795 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46785 23 +     47900 G--t-tcctg-ga-acat-a------tct-a-gta---at
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2218 23 -     14410 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46600 23 -    148725 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28878 23 -     40656 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8837 23 +     20796 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13951 23 -     17524 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29683 23 -     34525 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13463 23 -     25376 G--T-TCCTG-GA-ACGT-A------TCT-A-GTA---AT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366050 23 -  39242232 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271777 23 +  21565898 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34142 23 -     45857 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29043 23 -     32606 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5206 23 +      8499 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27604 23 +     70610 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24565 23 +     36323 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            14052 20 -     19938 ------GCTG-GA-ACAT-A------CCT-A-GTA---AG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             32462 13 -     33796 A--T-TCCTG-GA-GCAT----------------------
i Cheirogaleus_major.k141_666340                         C 0 I 9
s Cheirogaleus_medius.k141_759766                             6965 13 -     15404 A--T-TCCTG-GA-GCAT----------------------
i Cheirogaleus_medius.k141_759766                        C 0 I 9
s Chinchilla_lanigera.JH722012.1                           1240522 23 -   2543920 A--T-TGCTG-GA-GCAT-A------GCT-A-GTA---GT
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                                345466 23 +  18827391 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12005 23 -     44032 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306851 23 - 135778131 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  322 23 +     10270 A--T-TCCTG-GA-ACAT-A------CTT-A-GTA---AC
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607798 23 -    839153 A--T-TCCTG-GA-ACAT-A------CTT-A-GTA---AC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                141 22 -      4087 ---T-TCCAG-GA-ACAT-A------TCC-A-GGA---AC
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             411264 23 -   2368649 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381146 23 - 200372422 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4703 23 -     84244 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808406 25 +  53390261 C--T-CCTAG-GA-ACAATT----T-CTT-G-CTG---AT
i Condylura_cristata.JH655891.1                          I 23 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4263 23 -      8242 T--T-TCCTG-GA-ACAT-A------TGT-A-GAG---AT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 22 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46281 13 -     83289 ---------------CAT-A------AAT-A-GTG---AT
i Cricetomys_gambianus.CriGam_scaffold_14425             I 4 C 0
s Cricetulus_griseus.LT883664.1                          213118042 10 - 224834208 -------------------A------GTA-A-gta---at
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5833 22 +     87169 T--T-TCTTG-GA-ACAC-A-------CC-A-GTA---AC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 28 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    647188 14 -   1526836 A--T-TGCTG-GA-AAAT-A--------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20365 23 +     50838 A--T-TGCTG-GA-ACAC-A------CCT-A-ATA---GC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   8884 23 +     36344 A--T-TGCTG-GA-GCAT-A------CAT-A-GTA---GT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29894 23 +     75252 A--C-GGCTG-GA-GCAT-A------CCT-A-GTA---GT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111425 23 -   2246927 G--T-TGCTG-GA-GCAC-A------CCT-A-GGC---AG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294368 23 +  12879189 A--C-TCTGG-GA-GCGT-A------TCT-A-GTA---AT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633399 23 -  35494412 T--T-TCTTG-GA-ACAT-A------GCT-A-gta---at
i Delphinapterus_leucas.KZ290073.1                       I 22 C 0
s Desmodus_rotundus.KZ672289.1                            11866741 15 -  20541912 ------------a-acat-a------cct-a-gta---ag
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665966 23 -   1390856 T--t-tcctg-ga-acat-a------tct-a-gta---at
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 36 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140766 23 -    198055 T--t-tcctg-ga-acat-a------cct-a-gta---at
i Diceros_bicornis.DicBicMic_scaffold_5955               I 36 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100596 23 -    115145 A--T-TGCTG-GA-GCAT-A------GCT-A-GTA---GT
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952358 17 -  37912305 A--T-TCTTG-GC-ACCT-A------TCG-----------
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   7269 17 -     10735 A--T-TCTTG-GC-ACCT-A------TCG-----------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 10980 23 +     14636 G--T-TGCTG-GA-GCAT-A------CCT-A-GTA---GT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62856955 22 - 111700974 ---T-GCCAA-CC-ACAG-G------CCC-A-GTG---AC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7750 23 +     19438 T--t-ttctt-ga-acat-g------cct-a-gta---at
i Eidolon_helvum.AWHC01266696.1                          I 22 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241581 23 -    607251 T--T-TCTTG-ga-acat-a------act-a-gta---at
i Elaphurus_davidianus.JRFZ01104969.1                    I 22 C 0
s Elephantulus_edwardii.JH947257.1                         1227158 22 +  10337057 ---T-TCCTG-AA-GCCC-A------CTC-A-GTA---AC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33920 13 +    110024 ---------------CAT-A------GGT-A-GCA---AT
i Ellobius_lutescens.LOEQ01008920.1                      I 4 C 0
s Ellobius_talpinus.LOJH01026522.1                           15856 13 +     18970 ---------------CAT-A------GGT-A-GTA---AT
i Ellobius_talpinus.LOJH01026522.1                       I 4 C 0
s Enhydra_lutris.KZ291758.1                               24917578 26 +  41312741 T--T-TCTTG-GA-ACAT-A-------CT-AAGTATGtat
i Enhydra_lutris.KZ291758.1                              I 28 C 0
s Eptesicus_fuscus.JH977646.1                             12580336 15 +  14770903 ------------A-ACAT-A------TCT-A-GTG---AT
i Eptesicus_fuscus.JH977646.1                            I 3 C 0
s Equus_asinus.JREZ01000139.1                              3042897 23 -   4378816 T--t-tcctg-ga-acat-a------cct-a-ata---at
i Equus_asinus.JREZ01000139.1                            I 22 C 0
s Equus_caballus.CM000403.2                               21376836 23 +  39960074 T--t-tcctg-ga-acat-a------cct-a-ata---at
i Equus_caballus.CM000403.2                              I 22 C 0
s Equus_przewalskii.KK951119.1                              412818 23 -    498745 T--T-TCCTG-GA-ACAT-A------CCT-A-ATA---AT
i Equus_przewalskii.KK951119.1                           I 22 C 0
s Erinaceus_europaeus.JH835339.1                           3667604 23 +   7059049 T--T-CTCTG-GA-ACGA-A------TCT-A-GTA---AT
i Erinaceus_europaeus.JH835339.1                         I 35 C 0
s Erythrocebus_patas.Contig38                               264993 23 +  21539334 G--t-tccta-ga-acat-a------tct-a-gta---at
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72607 23 -    133382 T--T-TCTTG-GA-ACAT-A------GCT-A-GTA---AT
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 22 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               320 23 +     25849 T--T-TCTTG-GA-ACAT-A------GCT-A-GTA---AT
i Eubalaena_japonica.EubJap_flattened_line_57114         I 22 C 0
s Eulemur_albifrons.k141_51491                               16589 13 -     24895 A--T-TCCTG-GA-GCAT----------------------
i Eulemur_albifrons.k141_51491                           C 0 I 9
s Eulemur_collaris.k141_601111                               44298 13 -     70999 A--T-TCCTG-GA-GCAT----------------------
i Eulemur_collaris.k141_601111                           C 0 I 9
s Eulemur_coronatus.k141_384460                              88269 13 +    112731 A--T-TCCTG-GA-GCAT----------------------
i Eulemur_coronatus.k141_384460                          C 0 I 9
s Eulemur_flavifrons.k141_433119                             44832 13 +     68309 A--T-TCCTG-GA-GCAT----------------------
i Eulemur_flavifrons.k141_433119                         C 0 I 9
s Eulemur_fulvus.k141_636316                                 55156 13 -     65740 A--T-TCCTG-GA-GCAT----------------------
i Eulemur_fulvus.k141_636316                             C 0 I 9
s Eulemur_macaco.k141_1562045                                25788 13 -     75513 A--T-TCCTG-GA-GCAT----------------------
i Eulemur_macaco.k141_1562045                            C 0 I 9
s Eulemur_mongoz.k141_232305                                 49983 13 -     97555 A--T-TCCTG-GA-GCAT----------------------
i Eulemur_mongoz.k141_232305                             C 0 I 9
s Eulemur_rubriventer.k141_1423786                            6707 13 +     30972 A--T-TCCTG-GA-GCAT----------------------
i Eulemur_rubriventer.k141_1423786                       C 0 I 9
s Eulemur_rufus.k141_514691                                  44426 13 -     52037 A--T-TCCTG-GA-GCAT----------------------
i Eulemur_rufus.k141_514691                              C 0 I 9
s Eulemur_sanfordi.k141_1122526                              60830 13 -    111500 A--T-TCCTG-GA-GCAT----------------------
i Eulemur_sanfordi.k141_1122526                          C 0 I 9
s Felis_catus.CM001381.2                                 186248289 22 - 206538554 T--T-TCTTG-GA-ACAT-A-------CT-A-GTG---AC
i Felis_catus.CM001381.2                                 I 28 C 0
s Felis_catus_fca126.CM031415.1                          185118075 22 - 205367284 T--T-TCTTG-GA-ACAT-A-------CT-A-GTG---AC
i Felis_catus_fca126.CM031415.1                          I 28 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 29175 22 -     30238 T--T-TCTTG-GA-ACAT-A-------CT-A-GTG---AC
i Felis_nigripes.FelNig_flattened_line_31944             I 28 C 0
s Fukomys_damarensis.KN121974.1                            2923929 23 -   3816255 A--T-TGCTG-GA-CCAC-A------CCT-a-ata---ct
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                3219 23 -     28519 g--t-tcctg-gg-acac-a------cct-a-gta---at
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93298 23 -     95226 T--T-TCTTG-GA-AAAT-A------GCT-A-gta---at
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 22 C 0
s Glis_glis.GliGli_scaffold_163929                            3108 23 -      6791 A--T-TCCAG-AA-ACAT-A------CTT-A-GTA---AT
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3586045                              19756 23 -     19819 G--C-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Gorilla_beringei.k141_3586045                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                258174 23 - 186649187 g--c-tcctg-ga-acat-a------tct-a-gta---at
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    4177 23 -     78134 A--T-TCCAA-GA-ACAT-A------TTT-A-CTA---AT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16517 13 -     40692 A--T-TCCTG-GA-GCAT----------------------
i Hapalemur_alaotrensis.k141_330369                      C 0 I 9
s Hapalemur_gilberti.k141_646465                             37916 13 +     49394 A--T-TCCTG-GA-GCAT----------------------
i Hapalemur_gilberti.k141_646465                         C 0 I 9
s Hapalemur_griseus.k141_763500                              62787 13 -     66874 A--T-TCCTG-GA-GCAT----------------------
i Hapalemur_griseus.k141_763500                          C 0 I 9
s Hapalemur_meridionalis.k141_258450                         11658 13 -     42923 A--T-TCCTG-GA-GCAT----------------------
i Hapalemur_meridionalis.k141_258450                     C 0 I 9
s Hapalemur_occidentalis.k141_578367                         18660 13 -     53142 A--T-TCCTG-GA-GCAT----------------------
i Hapalemur_occidentalis.k141_578367                     C 0 I 9
s Helogale_parvula.HelPar_flattened_line_2585                32266 22 -    327341 T--T-TCTTT-GA-ACAT-A-------CC-A-GTA---AC
i Helogale_parvula.HelPar_flattened_line_2585            I 28 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10964 23 +     48891 T--T-TCTTG-ga-acat-a------gct-a-gta---at
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 22 C 0
s Heterocephalus_glaber.JH602082.1                         1934317 23 -  22651954 a--t-tggtg-ga-gcac-a------cct-a-CTA---GT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1673 22 +      8654 ---T-TCCCG-GG-GCAT-G------ACC-C-GGA---GC
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                9107 23 -     36432 T--T-TCTTG-GA-ACAT-A------GCT-A-GTA---GT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 22 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553105 23 -   1711038 T--T-TCCTG-GA-CCAT-A------cct-a-tta---at
i Hipposideros_armiger.JXIK01000431.1                    I 22 C 0
s Hipposideros_galeritus.HipGal_scaffold_790761                 11 23 +       338 T--T-TCCTG-GA-GCAT-A------TCT-A-TTA---AT
i Hipposideros_galeritus.HipGal_scaffold_790761          N 0 C 0
s Hoolock_leuconedys.ctg274                                    144647 23 -    630532 G--C-TCCTG-GA-ACAT-A------CCT-G-GTA---AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71628 23 +     83186 T--T-TCTTG-GAAACAT-A-------CC-A-TTA---AC
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 24 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73572 23 +    143317 T--T-TGCTG-GG-GCAT-A------CCT-A-ATA---GT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7678 23 +     12352 G--C-TCCTG-GA-ACAT-A------TCT-G-GTA---AT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14863 23 +     55766 G--C-TCCTG-GA-ACAT-A------TCT-G-GTA---AT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054393 23 + 191637585 G--C-TCCTG-GA-ACAT-A------TCT-G-GTA---AT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803271 23 +  11177569 G--C-TCCTG-GA-ACAT-A------TCT-G-GTA---AT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9484 20 -    135385 G--T----TG-TA-GCAT-A------CGT-A-GTA---GT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388662 23 +   7955117 A--T-TCCCA-GA-ACAT-A------TTT-A-TTA---AG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    4196 13 +     11955 A--T-TCCTG-GA-GCAT----------------------
i Indri_indri.k141_2415743                               C 0 I 9
s Inia_geoffrensis.IniGeo_flattened_line_69447               11502 23 -     16823 T--T-TCTTG-GA-ACAT-A------GCT-A-GTG---AT
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 22 C 0
s Jaculus_jaculus.JH725527.1                               1241512 14 +   9596543 ---------------GTA-A------GCCAA-GAA---AG
i Jaculus_jaculus.JH725527.1                             I 4 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73340 23 -     97402 T--T-TCTTG-GA-ACAT-A------GCT-A-GTA---AT
i Kogia_breviceps.KogBre_flattened_line_3970             I 22 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64633 15 -     65777 ------------A-ACAT-A------TCT-A-GTG---AT
i Lasiurus_borealis.LasBor_scaffold_16567                I 3 I 48
s Lemur_catta.scaffold_24                                 14761314 13 +  30322482 A--T-TTCTG-GA-GCAT----------------------
i Lemur_catta.scaffold_24                                C 0 I 9
s Lepilemur_ankaranensis.k141_567626                         10822 13 +     29618 A--T-TCTTG-GA-GCAT----------------------
i Lepilemur_ankaranensis.k141_567626                     C 0 I 9
s Lepilemur_dorsalis.k141_387009                             10828 13 +     31569 A--T-TCTTG-GA-GCAT----------------------
i Lepilemur_dorsalis.k141_387009                         I 10 I 9
s Lepilemur_ruficaudatus.k141_330196                         10828 13 +     24756 A--T-TCTTG-GA-GCAT----------------------
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 9
s Lepilemur_septentrionalis.k141_360456                      10838 13 +     16388 A--T-TCTTG-GA-GCAT----------------------
i Lepilemur_septentrionalis.k141_360456                  C 0 I 9
s Leptonychotes_weddellii.KB714746.1                        814969 22 -   3914936 T--T-TCTTG-GA-ACAT-A-------CT-A-GTA---AC
i Leptonychotes_weddellii.KB714746.1                     I 28 C 0
s Lipotes_vexillifer.KE559953.1                             342687 23 +    662738 T--T-TCTTG-GA-ACAT-A------GCt-a-gaa---at
i Lipotes_vexillifer.KE559953.1                          I 22 C 0
s Lophocebus_aterrimus.ctg367                               335928 23 -   1826925 G--T-TCCTG-GA-ACGT-A------TCT-A-GTA---AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086339 20 +  43346337 ---T-TCCTG-GG-ACAT-A--------C-A-GTA---AC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41616005 22 +  59628241 T--T-TCTTG-GA-ACAT-A-------ct-a-ata---aa
i Lycaon_pictus.CM007581.1                               I 28 C 0
s Macaca_arctoides.k141_1757516                              47320 23 -     61512 G--T-TCCTG-GA-ACAT-A------TCT-A-GCA---AT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 374982 23 -  60120075 G--T-TCCTG-GA-ACAT-A------TCT-A-GCA---AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27250 23 +     30207 G--T-TCCTG-GA-ACAT-A------TCT-A-GCA---AT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2088 23 -      5035 G--T-TCCTG-GA-ACAT-A------TCT-A-GCA---AT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27203 23 +     30527 G--T-TCCTG-GA-ACAT-A------TCT-A-GCA---AT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38379 23 -     50087 G--T-TCCTG-GA-ACAT-A------TCT-A-GCA---AT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48124 23 +     51645 G--T-TCCTG-GG-ACAT-A------TCT-A-GCA---AT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417326 23 - 187317192 G--T-TCCTG-GA-ACAT-A------TCT-A-GCA---AT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401557 23 +  25927173 G--T-TCCTG-GG-ACAT-A------TCT-A-GCA---AT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50728 23 -     62418 G--T-TCCTG-GG-ACAT-A------TCT-A-GCA---AT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3259 23 +     14901 G--T-TCCTG-GA-ACAT-A------TCT-A-GCA---AT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47201 23 +     59329 G--T-TCCTG-GG-ACAT-A------TCT-A-GCA---AT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273108 23 +    668171 G--T-TCCTG-GA-ACAT-A------TCT-A-GCA---AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1740 23 -      5049 G--T-TCCTG-GA-ACAT-A------TCT-A-GCA---AT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4906 23 +     17132 G--T-TCCTG-GG-ACAT-A------TCT-A-GCA---AT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224695 23 -    270270 T--T-TTCTT-GA-ATAT-G------CCT-A-GTA---AT
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 22 C 0
s Mandrillus_leucophaeus.scaffold280                        324396 23 +  24302211 G--t-tcctg-ga-acat-a------tct-a-gta---at
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359227 23 -    752769 G--t-tcctg-ga-acat-a------tct-a-gta---at
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675014 23 -    737560 T--T-Gcctg-ga-acat-a------tct-a-gta---at
i Manis_javanica.JSZB01003497.1                          I 22 C 0
s Manis_pentadactyla.KN006162.1                             222314 23 +    317179 T--T-Gcctg-ga-acat-a------tct-a-gta---at
i Manis_pentadactyla.KN006162.1                          I 22 C 0
s Marmota_marmota.CZRN01000018.1                           7502875 23 +  40650429 A--T-TCTCA-GA-ACAT-A------TCC-A-TTA---AG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151855 23 +    207569 T--T-TTCAG-GA-ACAT-A------CCT-G-GTA---AT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 22 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27697 22 -     74585 T--T-TCTTG-GA-ACAT-A-------CT-A-GTA---AC
i Mellivora_capensis.MelCap_flattened_line_19308         I 28 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52280 13 -    140813 ---------------CAT-C------GAT-A-GTA---AT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 4 I 6
s Mesoplodon_bidens.MesBid_scaffold_6114                     88971 23 +     93471 T--T-TCTTG-GA-ACAT-A------GCT-A-GTA---AT
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 22 C 0
s Microcebus_murinus.CM007674.1                           74986653 13 +  93316391 A--T-TCCTG-GA-GAAT----------------------
i Microcebus_murinus.CM007674.1                          C 0 I 9
s Microgale_talazaci.MicTal_scaffold_6613                    48137 22 +    145209 ---T-TCTAG-CC-TCAG-A------CCC-G-GTC---TC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186534 15 +    200668 ------------A-ACAT-A------CCT-T-GTA---AG
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 3 C 0
s Microtus_ochrogaster.CM001695.1                         15965340 13 +  27267610 ---------------CTT-A------GAt-a-gta---at
i Microtus_ochrogaster.CM001695.1                        I 4 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364681 14 -   8254450 ------------A-ACAT-G------TC--A-GTA---AT
i Miniopterus_natalensis.LDJU01000034.1                  I 3 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43601 14 -     48117 ------------A-ACAT-G------TC--A-GTA---AT
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 3 C 0
s Miopithecus_ogouensis.k141_1534655                         24494 23 -     27822 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046         9980 22 +     27589 T--T-TCTTG-GA-ACAT-A-------CT-A-GTA---AC
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 28 C 0
s Mirza_zaza.k141_766280                                     54435 13 -     62432 A--T-TCCTG-GA-GCAT----------------------
i Mirza_zaza.k141_766280                                 C 0 I 9
s Monodon_monoceros.MonMon_M_scaffold_103                   361076 23 +    437263 T--T-TCTTG-GA-ACAT-A------GCT-A-GTA---AT
i Monodon_monoceros.MonMon_M_scaffold_103                I 22 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180778  5 +    366855 ------------A-ACAT----------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27409 23 -     82753 C--t-tcttg-ga-acat-a------gct-a-gta---at
i Moschus_moschiferus.MosMos_scaffold_13123              I 22 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   19996 22 -     63510 T--T-TCTTT-GA-ACAT-A-------CC-A-GTA---AC
i Mungos_mungo.MunMun_flattened_line_18455               I 28 C 0
s Murina_feae.MurFea_scaffold_17764                          42633 15 +     47283 ------------A-ACAT-T------TCT-A-GTA---AT
i Murina_feae.MurFea_scaffold_17764                      I 3 C 0
s Mus_caroli.LT608237.1                                   35596519 13 + 120012414 ---------------CAT-A------GAT-A-ATA---AT
i Mus_caroli.LT608237.1                                  I 4 C 0
s Mus_musculus.chr8                                       41689692 13 + 129401213 ---------------CAT-a------gat-a-ata---at
i Mus_musculus.chr8                                      I 4 I 366
s Mus_pahari.LT608297.1                                   58217998 13 +  89631738 ---------------CAT-A------GGT-A-GTA---AT
i Mus_pahari.LT608297.1                                  I 4 C 0
s Mus_spretus.CM004101.1                                  39498977 13 + 130317789 ---------------CAT-A------GAT-A-GTA---AT
i Mus_spretus.CM004101.1                                 I 4 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               1174 23 -    124358 A--C-TTCAG-AA-ACAT-T------TTT-A-GTA---AT
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14356596 22 +  14710649 T--T-TCTTG-GA-ACAT-A-------CT-A-GTA---AC
i Mustela_putorius.JH418006.1                            I 28 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64878 23 +     67721 A--T-TGCTG-GA-GCAC-A------CCT-A-GTA---GC
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794900 15 +  10118263 ------------A-ACAT-A------TCT-A-GTC---AT
i Myotis_brandtii.KE162005.1                             I 3 C 0
s Myotis_davidii.KB100139.1                                4389075 15 +   6019432 ------------A-ACGT-A------TCT-A-GTA---AT
i Myotis_davidii.KB100139.1                              I 3 C 0
s Myotis_lucifugus.GL429869.1                               385103 15 +   4330536 ------------A-ACAT-A------TCT-A-GTA---AT
i Myotis_lucifugus.GL429869.1                            I 3 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3888 15 +     18357 ------------A-ACAT-A------TCT-A-GTA---AT
i Myotis_myotis.MyoMyo_scaffold_66571                    I 3 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121213 16 +    130748 -----------GA-ACAT-A------CTT-A-GTA---AC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 7 C 0
s Nannospalax_galili.KL204047.1                             948162 12 +   3037898 ---------------CAG-T-------CT-C-ATA---GT
i Nannospalax_galili.KL204047.1                          I 4 C 0
s Nasalis_larvatus.k141_1350636                              31271 23 +     34575 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233742 23 -   7148211 T--T-TCTTG-GA-ACAT-A------GCT-A-GTA---AT
i Neophocaena_asiaeorientalis.KZ687982.1                 I 22 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129372 15 -    149072 ------------A-GCAT-A------CCT-A-GTA---AT
i Noctilio_leporinus.NocLep_scaffold_7894                I 3 C 0
s Nomascus_annamensis.k141_1771965                           55565 23 -    132029 G--C-TCCTG-GA-ACAT-A------TCT-G-GTA---AT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11674 23 -     16345 G--C-TCCTG-GA-ACAT-A------TCT-G-GTA---AT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17559 23 +     22201 G--C-TCCTG-GA-ACAT-A------TCT-G-GTA---AT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415780 23 -  22158432 G--C-TCCTG-GA-ACAT-A------TCT-G-GTA---AT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27957 23 -     54323 G--C-TCCTG-GA-ACAT-A------TCT-G-GTA---AT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199601 22 +   9404916 T--T-TCTTG-GA-ACAT-A-------CT-A-Gta---aa
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 28 C 0
s Octodon_degus.JH651603.1                                11056975 23 -  11899542 A--T-TGCTG-GA-GCAC-A------CCT-A-GTA---GC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453397 22 +   2017862 T--T-TCTTG-GA-ACAT-A-------CT-A-GTA---AC
i Odobenus_rosmarus.KB229312.1                           I 28 C 0
s Odocoileus_virginianus.KZ100018.1                         438496 23 -    630418 T--T-TCTTG-GA-ACAT-A------Att-a-gta---at
i Odocoileus_virginianus.KZ100018.1                      I 22 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16379 23 +    150152 T--T-TCTTG-GA-ACAT-A------GCT-A-GTA---AT
i Okapia_johnstoni.LVCL01S0005463.1                      I 22 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95959 13 -    140218 ---------------CAT-A------GAT-A-GTA---AT
i Ondatra_zibethicus.OndZib_scaffold_7387                I 4 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6538 13 -     41509 ---------------CAT-A------GAC-A-GTG---AT
i Onychomys_torridus.OnyTor_scaffold_28377               I 4 C 0
s Orcinus_orca.KB316932.1                                  8104145 23 +  10937097 t--t-tcttg-ga-aCAT-A------GCT-A-GTA---AT
i Orcinus_orca.KB316932.1                                I 22 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1409 22 +     11607 ---T-TCCTG-GA-ACAT-A------CCC-A-GTA---AC
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40647 22 +    559221 T--T-TCTTG-GA-ACAT-A-------CT-A-Gta---aa
i Otocyon_megalotis.JAEUCK010005147.1                    I 28 C 0
s Ovis_aries.CM001607.2                                   26406091 23 -  44047080 T--T-TCTTG-ga-acat-a------gct-a-gta---at
i Ovis_aries.CM001607.2                                  I 22 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6610 23 +     17875 T--T-TCTTG-GA-ACAT-A------GCT-A-GTA---AT
i Ovis_canadensis.OviCan_scaffold_67953                  I 22 C 0
s Pan_paniscus.AJFE02004362.1                                  975 23 +      1339 G--C-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             15924 24 -     26668 G--CTTCCTG-GA-ACAT-A------TCT-A-GTa---at
i Pan_troglodytes.NBAG03003091.1                         I 50 I 29
s Panthera_onca.PanOnc_flattened_line_3271                   25998 22 -    230217 T--T-TCTTG-GA-ACAT-A-------CT-A-GTG---AC
i Panthera_onca.PanOnc_flattened_line_3271               I 28 C 0
s Panthera_pardus.KV860321.1                              18463324 22 -  18783137 T--T-TCTTG-GA-ACAT-A-------CT-A-GTG---AC
i Panthera_pardus.KV860321.1                             I 28 C 0
s Panthera_tigris.KE722367.1                               3973983 22 +   8748460 T--T-TCTTG-GA-ACAT-A-------CT-A-GTG---AC
i Panthera_tigris.KE722367.1                             I 28 C 0
s Pantholops_hodgsonii.KE114653.1                          1617616 23 +   2937107 T--T-TCTTG-ga-acat-a------gct-g-gta---at
i Pantholops_hodgsonii.KE114653.1                        I 22 C 0
s Papio_anubis.CM001495.2                                   245405 23 - 183742232 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11690 23 +     21308 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294433 23 -  20919399 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24330 23 -     27687 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1009 23 +     10553 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   969 23 -     10386 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16579 22 +     78924 T--T-TCTTG-GA-ATAT-A-------CT-C-GTA---AC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 28 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3702 23 +      9367 G--T-TATTG-AA-AATT-G------TCA-A-ATC---AT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249744 13 +  18517816 ---------------CGT-A------GAC-a-gta---at
i Peromyscus_maniculatus.KI615324.1                      I 4 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33853 23 -     56120 A--T-CGCTA-GA-GAAT-A------CCT-A-GAA---GT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5670 23 -     63832 T--T-TCTTG-GA-ACAT-A------GCT-A-GTA---AT
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 22 C 0
s Piliocolobus_badius.k141_2704958                            4653 23 +     55023 G--T-TCCTG-GA-ATTT-A------TCT-A-GTA---AT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4175 23 -     89929 G--T-TCCTG-GA-ATTT-A------TCT-A-GTA---AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4765 23 +     40849 G--T-TCCTG-GA-ATTT-A------TCT-A-GTA---AT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256495 23 +  14605196 G--T-TCCTG-GA-ATTT-A------TCT-A-GTA---AT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5468 15 +     22231 ------------A-ACAT-A------TCT-A-GTG---AT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 3 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2687 23 +     19503 T--T-TCTTG-GA-ACAT-A------GCT-A-GGA---AT
i Platanista_gangetica.PlaMin_flattened_line_83166       I 22 C 0
s Pongo_abelii.CM009266.2                                   181333 23 - 189387572 G--C-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196073 23 -   9816681 G--C-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29853 23 +     69807 G--t-tcctg-ga-actt-a------tct-a-gta---at
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47034 23 -     80239 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5664 22 +      7663 ---T-TCCCG-GG-GCAT-G------ACC-C-GGA---GC
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984462 13 +   4620579 A--T-TCCTG-GA-GCAT----------------------
i Prolemur_simus.MPIZ01000396.1                          C 0 I 9
s Propithecus_coquerelli.NW_012148875.1                    1567948 13 -   2598838 A--T-TCCTG-GA-GCAT----------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 38
s Propithecus_coronatus.k141_209299                           5586 13 -      7103 A--T-TCCTG-GA-GCAT----------------------
i Propithecus_coronatus.k141_209299                      C 0 I 9
s Propithecus_diadema.k141_153680                             6183 13 -     11706 A--T-TCCTG-GA-GCAT----------------------
i Propithecus_diadema.k141_153680                        C 0 I 9
s Propithecus_edwardsi.k141_635656                            9920 13 -     30655 A--T-TCCTG-GA-GCAT----------------------
i Propithecus_edwardsi.k141_635656                       C 0 I 9
s Propithecus_perrieri.k141_1496898                          36234 13 +     46564 A--T-TCCTG-GA-GCAT----------------------
i Propithecus_perrieri.k141_1496898                      C 0 I 9
s Propithecus_tattersalli.k141_1127767                       96513 13 -     98465 A--T-TCCTG-GA-GCAT----------------------
i Propithecus_tattersalli.k141_1127767                   C 0 I 9
s Propithecus_verreauxi.k141_1047036                         10152 13 +     35169 A--T-TCCTG-GA-GCAT----------------------
i Propithecus_verreauxi.k141_1047036                     C 0 I 9
s Psammomys_obesus.NESX01036366.1                            39803 13 +     52041 ---------------CAT-C------GAT-A-ATG---AT
i Psammomys_obesus.NESX01036366.1                        I 4 C 0
s Pteronotus_parnellii.KE847780.1                            53671 15 -     66298 ------------A-ACAT-A------CTT-A-Gta---at
i Pteronotus_parnellii.KE847780.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6175 26 -     18639 T--T-TCTTG-GA-ACAT-A-------CT-AAGTATGTAT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 28 C 0
s Pteropus_alecto.KB030862.1                               5842302 23 -  28871421 T--T-TTCTT-GA-ACAT-G------CCt-a-gta---at
i Pteropus_alecto.KB030862.1                             I 22 C 0
s Pteropus_vampyrus.KN525825.1                             3538817 23 -   4952924 T--T-TTCTT-GA-ACAT-G------CCt-a-gta---at
i Pteropus_vampyrus.KN525825.1                           I 22 C 0
s Puma_concolor.QAVW01001104.1                            18100638 22 +  38429054 T--T-TCTTG-GA-ACAT-A-------CT-A-GTG---AC
i Puma_concolor.QAVW01001104.1                           I 28 C 0
s Pygathrix_cinerea.k141_1153803                             29220 23 +     91421 G--t-tcctg-ga-acgt-a------tct-a-gta---at
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155772 23 -   7812017 G--t-tcctg-ga-acgt-a------tct-a-gta---at
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10077 23 +     72585 G--t-tcctg-ga-acgt-a------tct-a-gta---at
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   541 23 -     55207 T--T-TCTTG-GA-ACAT-A------ATT-A-GTA---AT
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 22 C 0
s Rattus_norvegicus.chr16                                 37024705 13 -  90668790 ---------------TAT-A------GAT-A-GGA---AT
i Rattus_norvegicus.chr16                                I 4 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916257 23 +   3329780 T--T-TCCTG-GA-ATAT-A------CCT-A-TTT---AT
i Rhinolophus_sinicus.LVEH01000134.1                     I 22 C 0
s Rhinopithecus_bieti.k119_778604                             3682 23 +      7119 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124352 23 + 195417433 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238524 23 -   7961872 G--t-tcctg-ga-actt-a------tct-a-gta---at
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76802 23 -    116970 T--T-TTCTT-GA-ACAT-G------CCT-A-GTA---AT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 22 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9773 23 +     16473 T--T-TCTTG-GA-ACAT-A------GCT-A-GTA---AT
i Saiga_tatarica.SaiTat_scaffold_39512                   I 22 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    117110 25 +    313613 T--C-TCCAG-GA-GCAATT----T-CCT-G-CTA---AT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 23 C 0
s Semnopithecus_entellus.k141_583282                           659 23 +     11297 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31052 23 +     58920 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17550 23 -     45317 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25208 23 -     42441 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27884 23 -     29113 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30961 23 -     48123 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51530 13 +     77746 ---------------CAG-A------GAT-A-GTA---AG
i Sigmodon_hispidus.SigHis_scaffold_20193                I 4 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865622 23 -   1910179 T--T-TCCTG-GA-ACAG-A------CCT-A-GTC---AT
i Solenodon_paradoxus.SolPar_flattened_line_126          I 22 C 0
s Sorex_araneus.JH798187.1                                 4672733 16 +  18376816 T--T-CTCTG-GA-ACTT-A------AC------------
i Sorex_araneus.JH798187.1                               I 36 I 5
s Spermophilus_dauricus.KZ294078.1                         1870240 23 +   3870691 A--T-TCCCA-GA-ACAT-A------TCC-A-TTA---AG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8250 22 -     97271 T--T-TCTTA-GA-ACAT-A-------CT-A-GTA---AC
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 28 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126416 22 +    196729 T--T-TCTTT-GA-ACAT-A-------CC-A-GTA---AC
i Suricata_suricatta.SurSur_flattened_line_6629          I 28 C 0
s Sus_scrofa.CM000828.4                                    6645462 23 +  69701581 T--T-TCCTG-GG-ACAT-A------ACT-A-GTA---AT
i Sus_scrofa.CM000828.4                                  I 22 C 0
s Symphalangus_syndactylus.tarseq_199                       393045 23 +   1523678 G--C-TCCTG-GA-ACAT-A------TCT-G-GTA---AT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15811 15 +     22964 ------------A-ACAT-A------TCC-A-GTA---AT
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4208 23 +      5583 A--T-TATTG-GA-ACAT-A------CTT-A-ATA---AC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      193144 23 +    199430 T--t-tcctg-ga-acat-a------cct-a-gta---at
i Tapirus_indicus.TapInd_scaffold_7432                   I 22 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    107112 23 -    539355 T--t-tcctg-ga-acat-a------cct-a-gta---at
i Tapirus_terrestris.TapTer_scaffold_755                 I 22 C 0
s Tarsius_lariang.k141_1733899                                2479 22 +      9917 -----tccagagc-acat-a------cct-g-gta---at
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9277 22 +     20590 -----tccagagc-acat-a------cct-a-gta---at
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355214 23 - 186847797 G--T-TCCTG-GA-ACAT-A------TCT-A-GTA---AT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26071 23 -     33621 A--T-TGCTG-GA-GCAT-A------CCT-A-GTA---GT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21155 23 -     31044 A--C-TGCTG-GA-ACGT-A------CCT-A-GTA---AG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481663 15 -    610378 ------------A-ACAC-A------TCT-A-ATA---AG
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_1189070                        22962 23 +     26378 G--t-tcctg-ga-actt-a------tct-a-gta---at
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35761 23 -     78344 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22287 23 +     25722 G--t-tcctg-ga-actt-a------tct-a-gta---at
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30717 23 -     62838 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30706 23 +     46913 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11445 23 -     28527 G--t-tcctg-ga-actt-a------tct-a-gta---at
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32652 23 -     64340 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30690 23 -     63452 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12137 23 +     22490 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5503 23 -      6147 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12416 23 -     13050 G--t-tcctg-ga-actt-a------tct-a-gta---at
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257580 23 -   6242583 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3676 23 +     19340 G--T-TCCTG-GA-ACTT-A------TCT-A-GTA---AT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175390 23 -    200418 T--T-TTTTG-GA-ACAT-A------GCT-A-ATA---AT
i Tragulus_javanicus.TraJav_scaffold_3462                I 22 C 0
s Trichechus_manatus.JH594705.1                            6483026 22 -  10818551 ---T-TCCTG-GA-ACGT-A------CCC-C-ATA---AC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1837190 23 -   4065304 G--T-TCCTA-GG-ACGA-A------CCT-A-GTA---AT
i Tupaia_chinensis.KB320699.1                            I 6 C 0
s Tupaia_tana.TupTan_flattened_line_394                      11240 23 -     70247 G--T-TCCTA-GA-ACGA-A------CCT-A-GTA---AT
i Tupaia_tana.TupTan_flattened_line_394                  I 6 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367270 23 -  33153633 T--T-TCTTG-GA-ACAT-A------GCT-a-gta---at
i Tursiops_truncatus.MRVK01000835.1                      I 22 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    5068 30 -     21056 C--C-TCCAG-GA-AATATTTTTTTTTTT-G-TTA---AT
i Uropsilus_gracilis.UroGra_scaffold_46687               I 23 C 0
s Ursus_maritimus.KK499267.1                                183617 22 +   5085361 T--T-TCTTG-GA-ACAT-A-------CT-A-GTA---AC
i Ursus_maritimus.KK499267.1                             I 28 C 0
s Varecia_rubra.k141_787544                                  27112 13 -     30710 A--T-TCCTG-GA-GCAT----------------------
i Varecia_rubra.k141_787544                              C 0 I 9
s Varecia_variegata.k141_289850                              26019 13 -    147434 A--T-TCCTG-GA-GCAT----------------------
i Varecia_variegata.k141_289850                          C 0 I 9
s Vicugna_pacos.KN270157.1                                   77800 23 +   5488506 T--T-TCCTG-GC-ATGT-A------Act-a-ata---at
i Vicugna_pacos.KN270157.1                               I 22 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106370 22 -    112863 T--T-TCTTG-GA-ACAT-A-------CT-A-GTA---AA
i Vulpes_lagopus.VulLag_flattened_line_12041             I 28 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175960 23 -    224448 A--T-TCCTG-GA-ACAT-G------TTC-A-TTT---AT
i Xerus_inauris.XerIna_scaffold_2302                     I 7 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732         30609 22 -     86975 T--T-TCTTG-GA-ACAT-A-------CT-A-GTA---AC
i Zalophus_californianus.ZalCal_flattened_line_17732     I 28 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1386 14 -      1899 ---------------CTA-A------ATAAA-GTC---AT
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 4 C 0
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Saimiri_ustus.k141_360372                                  31938  0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16784  0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29383  0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32692  0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       32306  0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110739  0 + 121099817 C
e Callibella_humilis.k141_1233062                            11864  0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Sapajus_macrocephalus.k141_796559                           9558  0 +     21866 C
e Sapajus_apella.ctg103                                     239968  0 +   5703754 C
e Saguinus_oedipus.k141_1368863                                616  0 +     10417 C
e Saguinus_mystax.k141_6319370                                1276  0 +     10149 C
e Saguinus_midas.LG03                                       394567  0 - 209938924 C
e Saguinus_labiatus.k141_264497                               3661  0 -      7443 C
e Saguinus_inustus.k141_4502137                                856  0 +      4564 C
e Saguinus_imperator.k141_2710097                            15976  0 -     24931 C
e Saguinus_geoffroyi.k141_356064                               373  0 +      9876 C
e Saguinus_bicolor.k141_161125                                8912  0 +     12412 C
e Plecturocebus_moloch.k141_1031110                          45651  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          44184  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      16258  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          9331  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          44283  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          9332  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44634  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       44240  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4836  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9754  0 +     39866 C
e Pithecia_vanzolinii.k141_1369553                           33337  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              558323  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33353  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33593  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               33317  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7569  0 -     25401 C
e Pithecia_albicans.k141_1239476                             66481  0 +    207309 C
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mico_schneideri.k141_1877700                                     20782  0 -     26561 C
e Mico_humeralifer.k141_1180625                              12463  0 -     12984 C
e Mico_argentatus.k141_582562                                11963  0 +     17804 C
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Leontopithecus_rosalia.k141_1583055                         5369  0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      567  0 +      8855 C
e Leontocebus_nigricollis.k141_1320036                         377  0 +      3713 C
e Leontocebus_illigeri.k141_2759473                            734  0 -     14280 C
e Leontocebus_fuscicollis.k141_3470480                         421  0 -     23187 C
e Lagothrix_lagothricha.k141_246028                          44940  0 +    110728 C
e Chiropotes_sagulatus.k141_1113111                           9664  0 +     34062 C
e Chiropotes_israelita.k141_313004                           44113  0 -    112038 C
e Chiropotes_albinasus.k141_1091259                          33016  0 -     52013 C
e Cheracebus_torquatus.k141_890198                           21042  0 +     39636 C
e Cheracebus_regulus.k141_471822                             21253  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20998  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10585  0 -     32913 C
e Cebus_unicolor.k141_1654760                                68744  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9648  0 -     34880 C
e Cebus_albifrons.Contig27                                  374591  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44838  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6780  0 -     12580 C
e Callithrix_kuhlii.k119_102356                               3381  0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455859  0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3470  0 -      8861 C
e Callimico_goeldii.k141_1609886                             11377  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         22212  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  22299  0 +     95584 C
e Cacajao_calvus.k141_89051                                  44773  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9479  0 +     28062 C
e Ateles_paniscus.k141_866194                                24673  0 -     33135 C
e Ateles_marginatus.k141_970259                              50615  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              35246  0 +     44353 C
e Ateles_chamek.k141_615173                                   7690  0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12555  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276389  0 +  21539123 C
e Aotus_vociferans.k141_1514463                               3326  0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3767  0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673773  0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3491  0 -     15923 C
e Aotus_azarae.k141_887050                                    2866  0 +     17741 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Alouatta_seniculus.k141_928287                             34633  0 +     42133 C
e Alouatta_puruensis.k141_251022                             10499  0 +     30854 C
e Alouatta_palliata.k141_638677                              48326  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42677  0 +     45454 C
e Alouatta_macconnelli.k141_1277969                           1160  0 -      3959 C
e Alouatta_juara.k141_1687208                                44052  0 -     64179 C
e Alouatta_discolor.k141_2561099                             45595  0 +     55831 C
e Alouatta_caraya.k141_1109140                               46162  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73924  0 -     84148 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       9037 28 +     36723 TTTCCG------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
s Acinonyx_jubatus.LLWD01001279.1                           814401 28 +   1699592 TTTCCA------TTTCTA---CAC--A--T-GTGC-TT-A--TA------T----T-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27719 21 +     63021 TTTCCA------TTTCTATA---C--A--C-TTGC----------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 7
s Ailuropoda_melanoleuca.LNAT01000098.1                   20417068 28 +  29979442 TTCCCG------TATCta---tac--a--t-ttgtt-t-a--ta------t----t-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            217188 28 +    347723 tttcca------tttcta---tac--a--t-TTGC-TT-A--TA------T----T-
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19965 30 -     61208 TTTCTA------TTTCTATA---C--T--TTTTGT-GC-A--TG------T----TG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   49987 28 +     53615 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2014 28 +     13857 TTTCCA------TCTCTATG---C--A--T-TTGC--T-A--TG------C----TG
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18569 28 -     21945 TTTCCA------TCTCTATG---C--A--T-TTGC--T-A--TG------C----TG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20254 28 +     32033 TTTCCA------TCTCTATG---C--A--T-TTGC--T-A--TG------C----TG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587247 34 +   2318259 tttcca------tttcta---cgc--a--t-ttgtttt-atatg---ttgt----t-
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52324 34 -     68529 TTTGCA------TTTCTG---TGA--A--T-TTGTTTT-GTATGTTG---T----T-
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25861 25 -     32367 TTTTCT------TCTCTATA---T--A--T-TTGT-TT-G--T--------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6899 29 -     15198 TTCCCA------TTTCTA-----T--A--G-CTGC-TT-A--CA------TAGG-T-
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Avahi_laniger.k141_2756659                                  8076 29 +     11645 TTTCCA------TTTCTACA---C--A--T-TTGC-CT-G--TG------T----CG
i Avahi_laniger.k141_2756659                             I 9 C 0
s Avahi_peyrierasi.k141_1823318                               8084 29 -     19611 TTTCCA------TTTCTGCA---C--A--T-TTGC-CT-G--TG------T----CG
i Avahi_peyrierasi.k141_1823318                          I 9 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7965016 32 -  23207421 tttcca------tttcca---taC--A--T-TTGCTTT-A--TGTTG---A----T-
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1516 32 -     25979 TTTCCA------TTTCCA---TAC--A--T-TTGCTTT-A--TGTTG---A----T-
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88254 34 +    124022 tttccg------tttctg---cgc--a--t-ttgtttt-atatg---ttgt----t-
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23783 34 +    288883 TTTCCA------TTTCTG---CAC--A--T-TTGTTTT-ATATGTTG---T----T-
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20358173 34 +  48749331 TTTCCA------TTTCTG---CNC--A--T-TTGTTTT-ATATGTTG---T----T-
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756737 34 +   1948126 tttcca------tttctg---cgc--a--t-ttgtttt-atatg---ttgt----t-
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546879 34 -  45695690 tttcca------tttctg---cgc--a--t-ttgtttt-atatg---ttgt----t-
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531887 34 -   4408762 TTTCCA------TTTCTG---CGC--A--T-TTGTTTT-ATATGTTG---T----T-
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632487 31 +  17673402 tttctg------tttcta---tac--a--t-ttgat-t-g--tg---ttgt----t-
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666774 31 +   7040546 tttctg------tttcta---tac--a--T-TTGA-TT-G--TGTTG---T----T-
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210432 31 +   1652518 tttctg------tttcta---tac--a--t-ttgat-t-g--tg---ttgt----t-
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506758 28 +  60362399 TTTCCA------TTTCTA---TAT--A--T-TTGC-TT-A--TA------T----T-
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10394 28 -     23171 TTTCCA------TTTCTA---TAT--A--T-TTGC-TT-A--TA------T----T-
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223737 28 +   9314153 tttcca------tttcta---tat--a--t-ttgct-t-a--ta------t----t-
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616872 28 +  59632846 tttcca------tttcta---tat--a--t-ttgct-t-a--ta------t----t-
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108453 28 -  63665305 tttcca------tttcta---tat--a--t-ttgct-t-a--ta------t----t-
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27410976 34 -  46296322 tttcca------tttcta---cgc--a--t-ttgtttt-atatg---ttgt----t-
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26593250 34 +  44709034 TTTCCA------TTTCTA---CGC--A--G-TTGTTTT-ATATGTTG---T----T-
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1317 29 -      1607 TTTCTA------TTCCTACA---C--A--T-TTGC-TG-A--TG------T----TG
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272625 29 +    496798 TTTCCA------CTTCTGTC---C--A--T-TTGC--TTA--TG------T----TA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1769 29 +      9923 TTCCCA------TTTCTG-----T--G--T-TTGC-TT-A--CA------TAGG-T-
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29506 29 -     39886 TTTCCA------TTTCTCCA---C--A--T-ATGT-TT-A--TG------T----TG
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     81087 28 -    217609 TTTCCA------ATTCTA---CAC--A--T-TTGC-TT-A--TG------T----T-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4998185 29 +  23392119 tttccc------ttcctctt---c--a--t-tGGC-TT-A--TG------T----TG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001627 29 +  23407841 tttccc------ttcctctt---c--a--t-tGGC-TT-A--TG------T----TG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64706 29 -     66877 TTTCCC------TTCCTCTT---C--A--T-TGGC-TT-A--TG------T----TG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4584 29 -      5494 TTTCCA------CTTCTGTC---C--A--T-TTGC--TTA--TG------T----TA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493717 31 -  27778364 tttcca------tttcta---tac--a--t-ttgct-t-a--tg------tcat-t-
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20550 31 +     27315 TTTCCA------TTTCTA---TAC--A--T-TTGC-TT-A--TG------TCAT-T-
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143069 28 -   4669795 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46808 28 +     47900 tttcca------tctctgta---c--a--t-ttgc--t-a--tg------c----tg
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2241 28 -     14410 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46623 28 -    148725 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28901 28 -     40656 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8860 28 +     20796 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            13974 28 -     17524 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29706 28 -     34525 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13486 28 -     25376 TTTCCA------TCTCTCTA---C--A--T-TTGC--T-A--TG------C----TG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366073 28 -  39242232 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271800 28 +  21565898 TTTCCA------TCTCTCTA---C--A--T-TTGC--T-A--TG------C----TG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34165 28 -     45857 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29066 28 -     32606 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5229 28 +      8499 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27627 28 +     70610 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24588 28 +     36323 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            14072 29 -     19938 TTTCTG------TTTCTACA---C--A--T-TTGC-TT-C--CG------T----GG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             32484 29 -     33796 TTTCCA------TTTCTACA---C--A--T-TTGC-TT-G--TG------T----CG
i Cheirogaleus_major.k141_666340                         I 9 C 0
s Cheirogaleus_medius.k141_759766                             6987 29 -     15404 TTTCCA------TTTCTACA---C--A--T-TTGC-TT-G--TG------T----CG
i Cheirogaleus_medius.k141_759766                        I 9 C 0
s Chinchilla_lanigera.JH722012.1                           1240545 29 -   2543920 TTTCCA------TTTCCGTA---C--A--T-TTGC-TT-A--TG------T----TG
i Chinchilla_lanigera.JH722012.1                         C 0 I 7
s Chlorocebus_aethiops.ctg25                                345489 28 +  18827391 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12028 28 -     44032 TTTCCA------TCTCTATA---C--A--T-TGGC--T-A--TG------C----TG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306874 28 - 135778131 TTTCCA------TCTCTATA---C--A--T-TGGC--T-A--TG------C----TG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  345  5 +     10270 TTTCC----------------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607821  5 -    839153 TTTCC----------------------------------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                163 29 -      4087 TTTCCA------TTTTTGTA---A--T--T-TTGC-TT-G--TG------T----TG
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             411287 28 -   2368649 TTTCCA------TCTCCACA---C--A--T-TTGC--T-G--TG------C----TG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381169 28 - 200372422 TTTCCA------TCTCCACA---C--A--T-TTGC--T-G--TG------C----TG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4726 28 -     84244 TTTCCA------TCTCCACA---C--A--T-TTGC--T-G--TG------C----TG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808431 28 +  53390261 TTCCCA------TTTCT---ATGT--A--T-TTGC-TT-A--TG------T----T-
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4286 31 -      8242 TTTCCA------TTTCTA-----TACA--T-TTGC-GT-A--TG------GTGT-T-
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46294 28 -     83289 TTCCTA------T-TCTATA---C--A--T-TGGC-TC-A--TG------C----TG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213118052 21 - 224834208 tttcta------tttctata---c--a--t-ttgg----------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 7
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5855 28 +     87169 TTTCCA------TTTCTA---CAC--A--T-TTGC-TT-A--TA------T----T-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    647202 26 -   1526836 ---CCA------TTTCTATA---C--A--T-TTGC-TT-G--TA------C----TG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20388 29 +     50838 TTTCTA------TTCCCATA---C--A--T-TTGC-TT-G--TG------T----TG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   8907 29 +     36344 TTTCCA------TTTTTCTA---C--A--T-TTGC-TT-A--TG------T----TG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29917 29 +     75252 TTTCCA------TTTCTCTA---C--A--T-TTGC-TT-A--TG------T----TG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111448 28 -   2246927 T-CCCA------TCTCTGTT---C--A--T-TTGC-TT-A--GG------T----GG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294391 29 +  12879189 TTTCCA------TTGCTATA---C--A--T-TTGC-CT-G--TG------T----GG
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633422 32 -  35494412 tttcca------tttcca---taC--A--T-TTACTTT-A--TGTTG---A----T-
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866756 29 -  20541912 ttccca------tttcta-----c--a--t-ttgct-c-a--ca------tagg-t-
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  665989 31 -   1390856 tttcca------tttctg---tac--a--t-ttgct-t-a--tg------tcat-t-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140789 31 -    198055 tttcca------tttcta---tac--a--t-ttgct-t-a--tg------tcat-t-
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100619 29 -    115145 TTTTCA------TCTTTGTA---C--A--T-TTGC-TT-A--TG------C----TG
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 7
s Dipodomys_ordii.KN672350.1                              18952375 10 -  37912305 ---------------------------------GC-TC-A--TG------T----TG
i Dipodomys_ordii.KN672350.1                             C 0 I 2
s Dipodomys_stephensi.DipSte_scaffold_89095                   7286 10 -     10735 ---------------------------------GC-TC-A--TG------T----TG
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 2
s Dolichotis_patagonum.DolPat_scaffold_80628                 11003 29 +     14636 TTTTCA------TTCCTCTA---C--A--T-TGGC-TT-A--TG------T----TG
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62856977  9 - 111700974 TCTCCA------CTC------------------------------------------
i Echinops_telfairi.JH980293.1                           C 0 I 1
s Eidolon_helvum.AWHC01266696.1                               7773 31 +     19438 tttcca------tttcta-----taca--t-ttgct-t-a--tg------ttgt-t-
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241604 34 -    607251 tttcca------tttctg---tgc--a--t-ttgtttt-atatg---ttgt----t-
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1227180 30 +  10337057 TTTCCA-----GTTTTTGCA---A--A--C-ATGC-TT-T--TG------T----TG
i Elephantulus_edwardii.JH947257.1                       C 0 I 3
s Ellobius_lutescens.LOEQ01008920.1                          33933 17 +    110024 TTTCT------------ata---c--atat-tttt----------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 7
s Ellobius_talpinus.LOJH01026522.1                           15869 17 +     18970 TTTCT------------ata---c--atat-tttt----------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 7
s Enhydra_lutris.KZ291758.1                               24917604 28 +  41312741 gttcca------tttcta---tac--a--t-ttGC-TT-A--TA------T----T-
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580351 29 +  14770903 ATTCCA------TTTCTA-----T--A--T-TTGC-TT-A--TG------TAGC-T-
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042920 31 -   4378816 tttgca------tttcta---tgc--a--t-atgct-t-g--tg------tcgt-t-
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376859 31 +  39960074 tttgca------tttctc---tgc--a--t-atgct-t-g--tg------tcgt-t-
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412841 31 -    498745 TTTGCA------TTTCGC---TGC--A--T-ATGC-TT-G--TG------TCGT-T-
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667627 26 +   7059049 TTTCTA------CTTCT---A--T--A--C-ATTA-TC-C--TC------T----T-
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265016 28 +  21539334 tttcca------tctctata---c--a--t-ttgc--t-a--tg------c----tg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72630 32 -    133382 TTTCCA------TTTCCA---TAC--A--T-TTGCTTT-A--TGTTG---A----T-
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               343 32 +     25849 TTTCCA------TTTCCA---TAC--A--T-TTGCTTT-A--TGTTG---A----T-
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16611 29 -     24895 TTTCCA------TTTCTACA---C--A--T-TTCC-CT-G--TG------T----CA
i Eulemur_albifrons.k141_51491                           I 9 C 0
s Eulemur_collaris.k141_601111                               44320 29 -     70999 TTTCCG------TTTCTACA---C--A--T-TTCC-CT-G--TG------T----CA
i Eulemur_collaris.k141_601111                           I 9 C 0
s Eulemur_coronatus.k141_384460                              88291 29 +    112731 TTTCCA------TTTCTACA---C--A--C-TTCC-CT-G--TG------T----CA
i Eulemur_coronatus.k141_384460                          I 9 C 0
s Eulemur_flavifrons.k141_433119                             44854 29 +     68309 TTTCCA------TTTCTACA---C--A--T-TTCC-CT-G--TG------T----CA
i Eulemur_flavifrons.k141_433119                         I 9 C 0
s Eulemur_fulvus.k141_636316                                 55178 29 -     65740 TTTCCA------TTTCTACA---C--A--T-TTCC-CT-G--TG------T----CA
i Eulemur_fulvus.k141_636316                             I 9 C 0
s Eulemur_macaco.k141_1562045                                25810 29 -     75513 TTTCCA------TTTCTACA---C--A--T-TTCC-CT-G--TG------T----CA
i Eulemur_macaco.k141_1562045                            I 9 C 0
s Eulemur_mongoz.k141_232305                                 50005 29 -     97555 TTTCCA------TTTCTACA---C--A--T-TTCC-CT-G--TG------T----CA
i Eulemur_mongoz.k141_232305                             I 9 C 0
s Eulemur_rubriventer.k141_1423786                            6729 29 +     30972 TTTCCA------TTTCTACA---C--G--T-TTCC-CT-G--TG------T----CA
i Eulemur_rubriventer.k141_1423786                       I 9 C 0
s Eulemur_rufus.k141_514691                                  44448 29 -     52037 TTTCCG------TTTCTACA---C--A--T-TTCC-CT-G--TG------T----CA
i Eulemur_rufus.k141_514691                              I 9 C 0
s Eulemur_sanfordi.k141_1122526                              60852 29 -    111500 TTTCCA------TTTCTACA---C--A--T-TTCC-CT-G--TG------T----CA
i Eulemur_sanfordi.k141_1122526                          I 9 C 0
s Felis_catus.CM001381.2                                 186248311 28 - 206538554 TTTCCA------TTTCTA---CAC--A--T-GTGC-TT-A--TA------T----T-
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185118097 28 - 205367284 TTTCCA------TTTCTA---CAC--A--T-GTGC-TT-A--TA------T----T-
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 29197 28 -     30238 TTTCCA------TTTCTA---CAC--A--T-GTGC-TT-A--TA------T----T-
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923952 29 -   3816255 tttcta------tttctata---c--a--T-TGGC-TT-A--TG------T----TG
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                3242 29 -     28519 tttcca------tttctgta---c--a--t-gtgct-t-a--tg------t----tg
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93321 34 -     95226 tttcca------tttctg---tgc--a--t-ttgtttt-atata---ttgt----t-
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            3131 28 -      6791 TTTCCA------TTTCTGTA---C--A--C-TCAT-TT-A--TG------T----T-
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3586045                              19779 28 -     19819 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Gorilla_beringei.k141_3586045                          C 0 N 0
s Gorilla_gorilla.LT578341.1                                258197 28 - 186649187 tttcca------tctctata---c--a--t-ttgc--t-a--tg------c----tg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    4200 28 -     78134 TTTCCA------TTTCTGTA---C--A--T-TCAC-TT-G--TG------T----T-
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16539 29 -     40692 TTTCCA------TTTCTACA---C--A--T-TTCC-CT-G--CA------T----CA
i Hapalemur_alaotrensis.k141_330369                      I 9 C 0
s Hapalemur_gilberti.k141_646465                             37938 29 +     49394 TTTCCA------TTTCTACA---C--A--T-TTCC-CT-G--CA------T----CA
i Hapalemur_gilberti.k141_646465                         I 9 C 0
s Hapalemur_griseus.k141_763500                              62809 29 -     66874 TTTCCA------TTTCTACA---C--A--T-TTCC-CT-G--CA------T----CA
i Hapalemur_griseus.k141_763500                          I 9 C 0
s Hapalemur_meridionalis.k141_258450                         11680 29 -     42923 TTTCCA------TTTCTACA---C--A--T-TTCC-CT-G--CA------T----CA
i Hapalemur_meridionalis.k141_258450                     I 9 C 0
s Hapalemur_occidentalis.k141_578367                         18682 29 -     53142 TTTCCA------TTTCTACA---C--A--T-TTCC-CT-G--CA------T----CA
i Hapalemur_occidentalis.k141_578367                     I 9 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32288 28 -    327341 TTTCCA------TTTCTG---CAC--A--T-TTGC-TT-A--TA------T----T-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 10987 34 +     48891 tttcca------tttcta---cgc--a--t-ttgtttt-atatg---ttgt----t-
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934340 29 -  22651954 TTTCCA------TTTCTATA---C--A--T-TTGC-TT-A--TA------T----TG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1695 29 +      8654 TCTCCA------GTTCTCCA---C--A--T-TAGC-TT-A--TG------C----TG
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                9130 32 -     36432 TTTCCA------TTTCTA---TAC--A--T-TTGCTTT-A--TGTT---CT----T-
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553128 31 -   1711038 ttttca------tttcta-----cccA--T-TTGC-TT-A--TG------TTGT-T-
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_790761                 34 31 +       338 TTTTCA------TTTCTA-----CCCA--C-TTGC-TT-A--TG------TTGT-T-
i Hipposideros_galeritus.HipGal_scaffold_790761          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144670 28 -    630532 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71651 28 +     83186 TTTCTA------TTTCTC---CAC--A--T-TTGC-TT-A--TA------T----T-
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73595 29 +    143317 TTTCCA------TTCCTCTA---T--G--T-TGGC-TT-A--TG------T----CG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7701 28 +     12352 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14886 28 +     55766 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054416 28 + 191637585 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803294 28 +  11177569 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9504 29 -    135385 TTTCTA------TTTCTATA---C--T--T-TTAT-TT-A--TG------T----TA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388685 28 +   7955117 TTGCCA------TTTCTATA---T--A--T-TTGC-TT-A--TG------C----T-
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Indri_indri.k141_2415743                                    4218 29 +     11955 TTTCCA------TTTCTACA---C--A--T-TTGC-CT-G--TG------T----CG
i Indri_indri.k141_2415743                               I 9 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11525 32 -     16823 TTTCCA------TTTCCA---TAC--A--T-TTGCTTT-A--TGTTG---A----T-
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241526 29 +   9596543 TTTCTA------TTTCTATA---C--T--T-TTAT-GC-A--TG------T----TG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73363 35 -     97402 TTTCCA------TTTCCA---TAC--A--T-TTGCTTT-A--TGTTGTTGA----T-
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    33905 29 -     49555 TTTCCA------TTTCTA-----T--A--T-TTGC-TT-A--TG------TAGC-T-
i Lasiurus_borealis.LasBor_scaffold_26245                I 250 C 0
s Lemur_catta.scaffold_24                                 14761336 29 +  30322482 TTTCCA------TTTCTACA---C--A--T-TTCC-CT-G--CA------T----CA
i Lemur_catta.scaffold_24                                I 9 C 0
s Lepilemur_ankaranensis.k141_567626                         10844 29 +     29618 TTTCCA------TTTCTACA---C--A--T-TTGC-CT-G--TG------T----CA
i Lepilemur_ankaranensis.k141_567626                     I 9 C 0
s Lepilemur_dorsalis.k141_387009                             10850 29 +     31569 TTTCCA------TTTCTACA---C--A--T-TTGC-CT-G--TG------T----CA
i Lepilemur_dorsalis.k141_387009                         I 9 C 0
s Lepilemur_ruficaudatus.k141_330196                         10850 29 +     24756 TTTCCA------TTTCTACA---C--A--T-TTGC-CT-G--TG------T----CA
i Lepilemur_ruficaudatus.k141_330196                     I 9 C 0
s Lepilemur_septentrionalis.k141_360456                      10860 29 +     16388 TTTCCA------TTTCTACA---C--A--T-TTGC-CT-G--TG------T----CA
i Lepilemur_septentrionalis.k141_360456                  I 9 C 0
s Leptonychotes_weddellii.KB714746.1                        814991 28 -   3914936 TTTCCA------TTTCTA---TAC--A--T-TTGC-TT-G--TA------T----T-
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342710 32 +    662738 tttcca------tttcca---taC--A--T-TTGCTTT-A--TGTTG---A----T-
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335951 28 -   1826925 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086359 29 +  43346337 TTTCCA------GTTCTGTA---C--A--T-TTGC-TT-A--TG------T----TG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41616027 28 +  59628241 tttcca------tttcta---tat--a--t-ttgct-t-a--ta------t----t-
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              47343 28 -     61512 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375005 28 -  60120075 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27273 28 +     30207 TTTCCA------TCTCTATA---T--A--T-TTGC--T-A--TG------C----TG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2111 28 -      5035 TTTCCA------TCTCTATA---T--A--T-TTGC--T-A--TG------C----TG
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27226 28 +     30527 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38402 28 -     50087 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48147 28 +     51645 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417349 28 - 187317192 TTTCCA------TCTCTATA---T--A--T-TTGC--T-A--TG------C----TG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401580 28 +  25927173 TTTCCA------TCTCTATA---C--A--T-TTAC--T-A--TG------C----TG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50751 28 -     62418 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3282 28 +     14901 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47224 28 +     59329 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273131 28 +    668171 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1763 28 -      5049 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4929 28 +     17132 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224718 31 -    270270 TTTCCA------TTTTTA-----TACA--T-TGGC-TT-A--TG------TTGT-T-
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324419 28 +  24302211 tttcca------tctctgta---c--a--t-ttgc--t-a--tg------c----tg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359250 28 -    752769 tttcca------tctctgta---c--a--t-ttgc--t-a--tg------c----tg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675037 31 -    737560 tttcca------tttcta---tac--a--t-ttgct-t-a--tg------ttgt-t-
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222337 31 +    317179 tttcca------tttcta---tac--a--t-ttgct-t-a--tg------ttgt-t-
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502898 28 +  40650429 TTTCCA------TTTCTATA---C--A--T-TTGC-TT-A--TG------C----T-
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                       151878 28 +    207569 TTTCCA------TCTATA-----TCCA--T-TTGC-TT-A--TG------T----T-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27719 28 -     74585 TTTCCA------TTTCTA---TAC--A--T-TTGC-TT-A--TA------T----T-
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52299  6 -    140813 ---------------------------------------A--TT------C----TG
i Meriones_unguiculatus.MerUng_scaffold_7390             I 6 I 2
s Mesoplodon_bidens.MesBid_scaffold_6114                     88994 32 +     93471 TTTCCA------TTTCCA---TAC--A--T-TTGCTCT-A--TGTTG---A----T-
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986675 29 +  93316391 TTTCCA------TTTCTACA---C--A--T-TTGC-CT-G--TG------T----CG
i Microcebus_murinus.CM007674.1                          I 9 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48159  9 +    145209 ATTCCA------CTT------------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_2233                186549 29 +    200668 TTCCCA------TTTCTG-----T--A--T-TTGC-TT-G--CA------TGGG-T-
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965353 23 +  27267610 tttcta------tttttatc---c--attt-tttt----------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 7
s Miniopterus_natalensis.LDJU01000034.1                    6364695 29 -   8254450 TTCCCA------TTTCTA-----T--A--T-CTGC-TT-A--TG------CAGC-T-
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43615 29 -     48117 TTCCCA------TTTCTA-----T--A--T-CTGC-TT-A--TG------T-GGCT-
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24517 28 -     27822 TTTCCA------TCTCTATA---C--G--T-TTGC--T-A--TG------C----TG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        10002 28 +     27589 TTTCCA------TTTCTA---TAC--A--T-TTGC-TT-G--TA------T----T-
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     54457 29 -     62432 TTTCCA------TTTCTACA---C--A--T-TTGC-CT-G--TG------T----CG
i Mirza_zaza.k141_766280                                 I 9 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   361099 32 +    437263 TTTCCA------TTTCCA---TAC--A--T-TTACTTT-A--TGTTG---A----T-
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180783 24 +    366855 -----A------TTTCTA-----T--A--T-TTGC-TT-A--TG------TAGG-C-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27432 34 -     82753 tttcca------tttctg---tgc--a--c-ttgtttt-atatg---ctgt----t-
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   20018 28 -     63510 TTTCCA------TTTCTA---CAC--A--T-TTGC-TT-A--TA------T----T-
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42648 29 +     47283 TTTCCA------TTTCTA-----T--A--T-TTGC-TT-A--TG------TAGC-T-
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596532 21 + 120012414 TTTCTA------TTCTTGta---c--a--t-tttc----------------------
i Mus_caroli.LT608237.1                                  C 0 I 7
s Mus_musculus.chr8                                       41690071 21 + 129401213 tttcta------ttcttgta---c--a--t-tttc----------------------
i Mus_musculus.chr8                                      I 366 I 7
s Mus_pahari.LT608297.1                                   58218011 27 +  89631738 TTTCTGTACATTTTCCTGTA---C--A--T-TTTC----------------------
i Mus_pahari.LT608297.1                                  C 0 I 7
s Mus_spretus.CM004101.1                                  39498990 21 + 130317789 TTTCTA------TTCTTGta---c--a--t-tttc----------------------
i Mus_spretus.CM004101.1                                 C 0 I 7
s Muscardinus_avellanarius.MusAve_scaffold_5560               1197 28 -    124358 TTTCCA------TTTCTGTA---C--A--T-TAAC-TT-G--TG------T----T-
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14356618 28 +  14710649 TTTCCA------TTTCTa---tac--a--t-ttgct-t-a--tt------t----t-
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     64901 29 +     67721 TATCTA------TTTCTACA---C--A--C-TTGC-TG-A--TG------T----TG
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 70
s Myotis_brandtii.KE162005.1                               9794915 29 +  10118263 TTTCCA------TTTCGA-----T--A--T-TTGC-TT-A--TG------CAGC-T-
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4389090 29 +   6019432 TTTCCA------TTTCGA-----T--A--T-TTGC-TT-A--TG------CAGC-T-
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               385118 29 +   4330536 TTTCCA------TTTCGA-----T--A--T-TTGC-TT-A--TG------CAGC-T-
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3903 29 +     18357 TTTCCA------TTTCGA-----T--A--T-TTGC-TT-A--TG------CAGC-T-
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121229 29 +    130748 TTTTGA------TATCTATA---C--A--T-TTGC-CT-A--TG------C----TG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             948174 29 +   3037898 TTTCCA------TTTCTATA---C--A--T-TTGC-TC-C--CG------C----TG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              31294 28 +     34575 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233765 32 -   7148211 TTTCCA------TTTCCA---TAC--A--T-TTGCTTT-A--TGTTG---A----T-
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129387 29 -    149072 TTTCCG------TTTCTA-----C--C--T-TTGC-TT-A--TA------TAGG-T-
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55588 28 -    132029 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11697 28 -     16345 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17582 28 +     22201 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415803 28 -  22158432 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  27980 28 -     54323 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199623 28 +   9404916 tttcca------tttcta---tat--a--t-ttgct-t-a--ta------t----t-
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11056998 29 -  11899542 TTTCTG------TTCCCACA---C--A--T-TTGC-TT-G--TG------T----TG
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453419 28 +   2017862 TTTCCA------TTTCTA---TAC--A--T-TTGC-TT-G--TA------T----T-
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         438519 34 -    630418 tttcca------tttctg---tac--a--T-TTGTTTT-ACATGTTG---T----T-
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16402 34 +    150152 TTTCCA------TTTCTG---GGC--A--T-TTGTTTT-ATATGTTG---T----T-
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    95972 22 -    140218 TTTTTA------TTTCTATA---C--ATTT-T-TT----------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 7
s Onychomys_torridus.OnyTor_scaffold_28377                    6551 21 -     41509 TTTCTA------TTTCTATA---C--A--T-TTGC----------------------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 7
s Orcinus_orca.KB316932.1                                  8104168 32 +  10937097 TTTCCA------TTTCCA---TAc--g--t-ttgcttt-a--tg---tttt----t-
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1431 27 +     11607 T--CCA------TTTCTGTA---A--A--T-TTGC-TG-A--TG------T----TG
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40669 28 +    559221 tttcca------tttcta---tat--a--t-ttgct-t-a--ta------t----t-
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26406114 34 -  44047080 tttcca------tttcta---cgc--a--t-ttgtttt-atatg---ttgt----t-
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6633 34 +     17875 TTTCCA------TTTCTA---CGC--A--T-TTGTTTT-ATATGTTG---T----T-
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02004362.1                                  998 28 +      1339 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1476167 28 - 189151597 tttcca------tctctata---c--a--t-TTGC--T-A--TG------C----TG
i Pan_troglodytes.CM009242.2                             I 110 I 67
s Panthera_onca.PanOnc_flattened_line_3271                   26020 28 -    230217 TTTCTA------TTTCTA---CAC--A--T-GTGC-TT-A--AA------T----T-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463346 28 -  18783137 TTTCTA------TTTCTA---CAC--A--T-GTGC-TT-A--AA------T----T-
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3974005 28 +   8748460 TTTCTA------TTTCTA---CAC--A--T-GTGC-TT-A--AA------T----T-
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617639 34 +   2937107 tttcca------tttcta---cgc--a--t-ttgtttt-atatg---ttgt----t-
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   245428 28 - 183742232 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11713 28 +     21308 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294456 28 -  20919399 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24353 28 -     27687 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1032 28 +     10553 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                   992 28 -     10386 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16601 28 +     78924 TTAACA------TTCCTA---CAT--A--T-TTGC-TT-A--CA------T----T-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3725 29 +      9367 TTTTCA------TTTGTATA---C--A--T-TTGT-TT-A--TA------A----TG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 2
s Peromyscus_maniculatus.KI615324.1                         249757 21 +  18517816 tttcta------tttctata---c--a--T-TTGC----------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 7
s Petromus_typicus.PetTyp_scaffold_17301                     33876 29 -     56120 TTTCCA------TTTCTGTG---C--C--T-TGGC-TT-A--TG------T----TA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5693 32 -     63832 TTTCCA------TTTCCA---TAC--A--T-TTGCTTT-A--TGTTG---A----T-
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            4676 27 +     55023 TT-CCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----CC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4198 27 -     89929 TT-CCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----CC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4788 27 +     40849 TT-CCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----CC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256518 27 +  14605196 TT-CCA------TCTCCATA---C--A--G-TTGC--T-A--TG------C----CC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5483 29 +     22231 TTTCCA------TTTCTA-----T--A--T-TTGC-TT-A--TG------TAGC-T-
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2710 34 +     19503 TTTCCA------TTTCCA---TAC--A--T-TTGCTTT-A--TGT-GTTGA----T-
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Pongo_abelii.CM009266.2                                   181356 28 - 189387572 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196096 28 -   9816681 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29876 28 +     69807 tttcca------tctccata---c--a--t-ttgc--t-a--tg------c----tg
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47057 28 -     80239 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5686 29 +      7663 TCTCCG------GTTCTCCA---C--A--T-TAGC-TT-A--TG------C----TG
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984484 29 +   4620579 TTTCCA------TTTCTACA---C--A--T-TTCC-CT-G--CG------T----CA
i Prolemur_simus.MPIZ01000396.1                          I 9 C 0
s Propithecus_coquerelli.NW_012156379.1                         81 29 -     15982 TTTCCA------TTTCTACA---C--A--T-TTGC-CT-G--TG------T----CG
i Propithecus_coquerelli.NW_012156379.1                  n 38 n 38
s Propithecus_coronatus.k141_209299                           5608 29 -      7103 TTTCCA------TTTCTACA---C--A--T-TTGC-CT-G--TG------T----CG
i Propithecus_coronatus.k141_209299                      I 9 C 0
s Propithecus_diadema.k141_153680                             6205 29 -     11706 TTTCCA------TTTCTACA---C--A--T-TTGC-CT-G--TG------T----CA
i Propithecus_diadema.k141_153680                        I 9 C 0
s Propithecus_edwardsi.k141_635656                            9942 29 -     30655 TTTCCA------TTTCTACA---C--A--T-TTGC-CT-G--TG------T----CG
i Propithecus_edwardsi.k141_635656                       I 9 C 0
s Propithecus_perrieri.k141_1496898                          36256 29 +     46564 TTTCCA------TTTCTACA---C--A--T-TTGC-CT-G--TG------T----CG
i Propithecus_perrieri.k141_1496898                      I 9 C 0
s Propithecus_tattersalli.k141_1127767                       96535 29 -     98465 TTTCCA------TTTCTGCA---C--A--T-TTGC-CT-G--TG------T----CA
i Propithecus_tattersalli.k141_1127767                   I 9 C 0
s Propithecus_verreauxi.k141_1047036                         10174 29 +     35169 TTTCCA------TTTCTACA---C--A--T-TTGC-CT-G--TG------T----CG
i Propithecus_verreauxi.k141_1047036                     I 9 C 0
s Psammomys_obesus.NESX01036366.1                            39816 21 +     52041 TTTCTA------TTTATATG---C--A--T-TGgc----------------------
i Psammomys_obesus.NESX01036366.1                        C 0 I 7
s Pteronotus_parnellii.KE847780.1                            53686 29 -     66298 cttcta------tttctt-----t--a--t-ttact-t-a--cg------TAGG-T-
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6201 28 -     18639 GTTCCA------TTTCTA---TAC--A--T-TTGC-TT-A--TA------T----T-
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842325 31 -  28871421 tttcca------tttcta-----taca--t-ttgct-t-a--ta------ttgt-t-
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538840 31 -   4952924 tttcca------tttcta-----taca--t-ttgct-t-a--ta------ttgt-t-
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100660 28 +  38429054 TTTCCA------TTTCTA---CAC--A--T-GTGC-TT-A--TA------T----T-
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29243 28 +     91421 tttcca------tctccata---c--a--t-ttgc--t-a--tg------c----tg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155795 28 -   7812017 tttcca------tctccata---c--a--t-ttgc--t-a--tg------c----tg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10100 28 +     72585 tttcca------tctccata---c--a--t-ttgc--t-a--tg------c----tg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   564 34 -     55207 TTTCCA------TTTCTG---TGC--A--T-TTGTTTT-ACATGTTG---T----T-
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37024718 21 -  90668790 GTTCTA------TTTCTGTA---C--A--T-TTTC----------------------
i Rattus_norvegicus.chr16                                C 0 I 11
s Rhinolophus_sinicus.LVEH01000134.1                       2916280 31 +   3329780 TGTTCA------TTTCTA-----TACA--T-TTGT-TT-A--TG------TTGT-T-
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3705 28 +      7119 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124375 28 + 195417433 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238547 28 -   7961872 tttcca------tctccata---c--a--t-ttgc--t-a--tg------c----tg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76825 31 -    116970 TTTCCA------TTTCTA-----TACA--T-TTGC-TT-A--TG------TTGT-T-
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9796 34 +     16473 TTTCCA------TTTCTA---CGC--A--T-TTGTTTT-ATATGTTG---T----T-
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    117135 28 +    313613 TTTCCA------TTTGT---ATAT--A--T-TTGC-TG-A--TA------T----T-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                           682 28 +     11297 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31075 28 +     58920 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17573 28 -     45317 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25231 28 -     42441 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27907 28 -     29113 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          30984 28 -     48123 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51543 21 +     77746 TTTCTA------TTTCTATG---C--A--T-TTGC----------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 7
s Solenodon_paradoxus.SolPar_flattened_line_126            1865645 25 -   1910179 TTTCCA------TTTCT------C--A--T-TTAC-TT-A--TG------T----T-
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672754 21 +  18376816 gtttgt------g----------t--a--t-tttt-gt-t--tg------t----t-
i Sorex_araneus.JH798187.1                               I 5 C 0
s Spermophilus_dauricus.KZ294078.1                         1870263 28 +   3870691 CCGCCA------TTTCTATA---C--A--T-TTGC-TT-A--TG------C----T-
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525              8272 28 -     97271 TTTTCA------TTTCTA---TTC--A--T-TTGC-TT-A--TA------T----T-
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126438 28 +    196729 TTTCCA------TTTCTA---CAC--A--T-TTGC-TT-A--TA------T----T-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645485 31 +  69701581 TTTCCC------ACTCTA---TAC--A--T-TTGC-TT-A--TGTTG---T----T-
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393068 28 +   1523678 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15826 29 +     22964 TTTCCA------TTTCTA-----G--A--T-TTGC-TT-T--TG------TAGC-T-
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4231 29 +      5583 TTTTGA------TATCTCTA---C--A--T-TTGC-CT-A--TG------C----TG
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      193167 31 +    199430 tttcca------tttcta---tac--a--t-ttgct-t-a--tg------tcat-t-
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    107135 31 -    539355 tttcca------tttcta---tac--a--t-ttgct-t-a--tg------tcat-t-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                2501 29 +      9917 tttcca------ctTTTCTC---C--A--T-TTAC--TTA--TG------T----TA
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9299 29 +     20590 tttcca------ctTTTCTC---C--A--T-TTAC--TTA--TG------T----TA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355237 28 - 186847797 TTTCCA------TCTCTATA---C--A--T-TTGC--T-A--TG------C----TG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26094 27 -     33621 TTTCTA------TGTCTATA---C--C--T-TGGC-TC-A--TG------T------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21178 20 -     31044 TTTCCG------TTTCTGTG---C--A--T-TTG-----------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481678 29 -    610378 TTCCCG------TTTCTA-----C--G--T-TTGC-TT-A--CA------TGGG-T-
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        22985 28 +     26378 tttcca------tctccata---c--a--t-ttgc--t-a--tg------c----tg
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35784 28 -     78344 TTTCCA------CCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22310 28 +     25722 tttcca------tctccata---c--a--t-ttgc--t-a--tg------c----tg
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30740 28 -     62838 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30729 28 +     46913 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11468 28 -     28527 tttcca------tctccata---c--a--t-ttgc--t-a--tg------c----tg
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32675 28 -     64340 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30713 28 -     63452 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12160 28 +     22490 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5526 28 -      6147 TTTCCA------TCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12439 28 -     13050 tttccg------tctccata---c--a--t-ttgc--t-a--tg------c----tg
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257603 28 -   6242583 TTTCCA------CCTCCATA---C--A--T-TTGC--T-A--TG------C----TG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3699 28 +     19340 TTTCCA------TCTCCATA---C--A--T-TTGC--T-G--TG------C----TG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175413 34 -    200418 TTTCCA------TTTCTA---TGT--A--T-TTGTTTT-ATATGTTG---T----T-
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6483048 29 -  10818551 TTTCCA------GTTCTGTA---C--G--T-TTGC-TT-A--TG------C----TG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1837213 29 -   4065304 TTTCCA------TACCTATA---C--A--T-TTAC-TT-A--CA------T----GA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      11263 29 -     70247 TTTTCA------TACCTATA---C--A--T-TTAC-TT-A--CA------T----GA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367293 32 -  33153633 tttcca------tttcca---tac--G--T-TTGCTTT-A--TGTTG---A----T-
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    5098 28 -     21056 TTTCTA------TTTCT---GTAT--A--T-TTGC-TT-A--TA------T----T-
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183639 28 +   5085361 TTCCCA------TTTCta---tac--a--t-ttgtt-t-a--ta------t----t-
i Ursus_maritimus.KK499267.1                             C 0 I 3
s Varecia_rubra.k141_787544                                  27134 29 -     30710 TTTCCA------TCTCTACA---C--A--T-TTGC-CT-G--TG------T----CA
i Varecia_rubra.k141_787544                              I 9 C 0
s Varecia_variegata.k141_289850                              26041 29 -    147434 TTTCCA------TCTCTACA---C--A--T-TTGC-CT-G--CG------T----CA
i Varecia_variegata.k141_289850                          I 9 C 0
s Vicugna_pacos.KN270157.1                                   77823 31 +   5488506 tttctg------tttcta---tac--a--t-TTGA-TT-G--TGTTG---T----T-
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106392 28 -    112863 TTTCCA------TTTCTA---TAT--A--T-TTGC-TT-A--TA------T----T-
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        175984 28 -    224448 TTTCTG------TTTCTATT---A--A--T-TTGC-CT-T--TG------T----T-
i Xerus_inauris.XerIna_scaffold_2302                     I 1 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732         30631 28 -     86975 TTTCCA------TTTCTA---TAC--G--C-TTGC-TT-G--TA------T----T-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1400 29 -      1899 TTTTTA------TTTCTATA---G--T--T-TTAC-AT-A--TA------G----TG
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Saimiri_ustus.k141_360372                                  31938  0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16784  0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29383  0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32692  0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       32306  0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110739  0 + 121099817 C
e Callibella_humilis.k141_1233062                            11864  0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Sapajus_macrocephalus.k141_796559                           9558  0 +     21866 C
e Sapajus_apella.ctg103                                     239968  0 +   5703754 C
e Saguinus_oedipus.k141_1368863                                616  0 +     10417 C
e Saguinus_mystax.k141_6319370                                1276  0 +     10149 C
e Saguinus_midas.LG03                                       394567  0 - 209938924 C
e Saguinus_labiatus.k141_264497                               3661  0 -      7443 C
e Saguinus_inustus.k141_4502137                                856  0 +      4564 C
e Saguinus_imperator.k141_2710097                            15976  0 -     24931 C
e Saguinus_geoffroyi.k141_356064                               373  0 +      9876 C
e Saguinus_bicolor.k141_161125                                8912  0 +     12412 C
e Plecturocebus_moloch.k141_1031110                          45651  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          44184  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      16258  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          9331  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          44283  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          9332  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44634  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       44240  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4836  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9754  0 +     39866 C
e Pithecia_vanzolinii.k141_1369553                           33337  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              558323  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33353  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33593  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               33317  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7569  0 -     25401 C
e Pithecia_albicans.k141_1239476                             66481  0 +    207309 C
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mico_schneideri.k141_1877700                                     20782  0 -     26561 C
e Mico_humeralifer.k141_1180625                              12463  0 -     12984 C
e Mico_argentatus.k141_582562                                11963  0 +     17804 C
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Leontopithecus_rosalia.k141_1583055                         5369  0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      567  0 +      8855 C
e Leontocebus_nigricollis.k141_1320036                         377  0 +      3713 C
e Leontocebus_illigeri.k141_2759473                            734  0 -     14280 C
e Leontocebus_fuscicollis.k141_3470480                         421  0 -     23187 C
e Lagothrix_lagothricha.k141_246028                          44940  0 +    110728 C
e Chiropotes_sagulatus.k141_1113111                           9664  0 +     34062 C
e Chiropotes_israelita.k141_313004                           44113  0 -    112038 C
e Chiropotes_albinasus.k141_1091259                          33016  0 -     52013 C
e Cheracebus_torquatus.k141_890198                           21042  0 +     39636 C
e Cheracebus_regulus.k141_471822                             21253  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20998  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10585  0 -     32913 C
e Cebus_unicolor.k141_1654760                                68744  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9648  0 -     34880 C
e Cebus_albifrons.Contig27                                  374591  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44838  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6780  0 -     12580 C
e Callithrix_kuhlii.k119_102356                               3381  0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455859  0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3470  0 -      8861 C
e Callimico_goeldii.k141_1609886                             11377  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         22212  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  22299  0 +     95584 C
e Cacajao_calvus.k141_89051                                  44773  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9479  0 +     28062 C
e Ateles_paniscus.k141_866194                                24673  0 -     33135 C
e Ateles_marginatus.k141_970259                              50615  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              35246  0 +     44353 C
e Ateles_chamek.k141_615173                                   7690  0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12555  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276389  0 +  21539123 C
e Aotus_vociferans.k141_1514463                               3326  0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3767  0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673773  0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3491  0 -     15923 C
e Aotus_azarae.k141_887050                                    2866  0 +     17741 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Alouatta_seniculus.k141_928287                             34633  0 +     42133 C
e Alouatta_puruensis.k141_251022                             10499  0 +     30854 C
e Alouatta_palliata.k141_638677                              48326  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42677  0 +     45454 C
e Alouatta_macconnelli.k141_1277969                           1160  0 -      3959 C
e Alouatta_juara.k141_1687208                                44052  0 -     64179 C
e Alouatta_discolor.k141_2561099                             45595  0 +     55831 C
e Alouatta_caraya.k141_1109140                               46162  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73924  0 -     84148 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       9065 21 +     36723 T-T------------------T-CC---T--CTAT-ACTGAATGATC
s Acinonyx_jubatus.LLWD01001279.1                           814429 19 +   1699592 ---------------------T-CCTC-C--A--G-ACTGGATGCTT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27747 21 +     63021 C-T------------------T-TCTC-T--T--T-ACCAAATGCTA
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 7 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20417096 19 +  29979442 ---------------------t-cctc-C--A--A-ACTAAATGTTC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            217216 19 +    347723 ---------------------T-CCTC-C--A--G-ACTGAATGCTG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    19995 21 -     61208 C-T------------------T-CCTT-T--T--T-GCTGGCTGTTT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50015 21 +     53615 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2042 21 +     13857 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18597 21 -     21945 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20282 21 +     32033 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587281 19 +   2318259 ---------------------c-cctc-c--c--t-gatgaatgctc
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52358 19 -     68529 ---------------------C-CCTC-C--C--T-GAGGAATGCTC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25886  9 -     32367 --------------------------------------TATATCCTC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6928 19 -     15198 ---------------------T-CTTC-C--A--T-ACCGAATATGC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Avahi_laniger.k141_2756659                                  8105 21 +     11645 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               8113 21 -     19611 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7965048 19 -  23207421 ---------------------T-CCTC-C--G--T-GATGAATGCTC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1548 19 -     25979 ---------------------T-CCTC-C--G--T-GATGAATGCTC
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88288 19 +    124022 ---------------------c-cctc-c--c--t-gatgaatgctc
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23817 19 +    288883 ---------------------C-CCTC-C--C--T-GATGAATGCTC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20358207 19 +  48749331 ---------------------C-CCTC-C--C--T-GATGAATGCTC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756771 19 +   1948126 ---------------------c-cctc-c--c--t-gatgaatgctc
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546913 19 -  45695690 ---------------------c-cctc-c--c--t-gatgaatgctc
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531921 19 -   4408762 ---------------------C-CCTC-C--T--T-GATGAATGCTC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632518 19 +  17673402 ---------------------t-cctc-c--g--t-gctgaatgctc
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666805 19 +   7040546 ---------------------T-CCTC-C--G--T-GCTGAATGCTC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210463 19 +   1652518 ---------------------t-cctc-c--g--t-gctgaatgctc
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506786 18 +  60362399 ---------------------T-CCTC-C--A--A-ACTGAA-ACTC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10422 18 -     23171 ---------------------T-CCTC-C--A--A-ACTGAA-ACTC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223765 18 +   9314153 ---------------------t-ccTC-C--A--A-ACTGAA-ACTC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616900 18 +  59632846 ---------------------t-ccTC-C--A--A-ACTGAA-ACTC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108481 18 -  63665305 ---------------------t-ccTC-C--A--A-ACTGAA-ACTC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27411010 19 -  46296322 ---------------------c-cctc-c--c--t-gatgaatgctc
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26593284 19 +  44709034 ---------------------C-CCTC-C--C--T-GATGAATGCTC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1346 21 -      1607 T-C------------------T-CCTC-T--G--T-ACTGAGCGCTC
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272654 19 +    496798 T-G------------------T-CC---T--ACAT-ACTGAATGT--
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1798 19 +      9923 ---------------------T-CCTC-C--A--T-ACCGAATACAC
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29535 18 -     39886 T-T------------------T-TCTC-A--T--T-ATAGAATG---
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     81115 19 -    217609 ---------------------T-CCTC-C--G--T-GCTGAATGCTC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4998214 21 +  23392119 T-T------------------T-CCTC-C--T--T-ACCAAGTATTT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001656 21 +  23407841 T-T------------------T-CCTC-C--T--T-ACCAAGTATTT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64735 21 -     66877 T-T------------------T-CCTC-C--T--T-ACCAAGTATTT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4613 19 -      5494 T-G------------------T-CC---T--ACAT-ACTGAATGT--
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493748 19 -  27778364 ---------------------t-ctcc-t--a--a-actgagtgctc
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20581 19 +     27315 ---------------------T-CTCC-T--A--A-ACTGAGTGCTC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143097 21 -   4669795 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46836 21 +     47900 t-t------------------t-cc---t--ctat-actgaatgatc
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2269 21 -     14410 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46651 21 -    148725 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28929 21 -     40656 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8888 21 +     20796 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14002 21 -     17524 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29734 21 -     34525 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13514 21 -     25376 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366101 21 -  39242232 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271828 21 +  21565898 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34193 21 -     45857 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29094 21 -     32606 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5257 21 +      8499 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27655 21 +     70610 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24616 21 +     36323 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            14101 21 -     19938 C-C------------------G-CCTC-C--A--C-GCTGAAGGCTC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             32513 21 -     33796 T-T------------------T-CC---T--CTGT-ACTGAAGGCTT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             7016 21 -     15404 T-T------------------T-CC---T--CTGT-ATTGAAGGCTT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240581 13 -   2543920 -------------------------------T--T-TCTGAGTGCTT
i Chinchilla_lanigera.JH722012.1                         I 7 C 0
s Chlorocebus_aethiops.ctg25                                345517 21 +  18827391 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12056 21 -     44032 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306902 21 - 135778131 C-T------------------T-CC---T--CTAT-ACTGAATGATC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                192 21 -      4087 G-T------------------T-CTTC-T--C--T-CCTGAATGCTC
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             411315 21 -   2368649 T-T------------------T-CC---T--CTGT-ACTGAATGATC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381197 21 - 200372422 T-T------------------T-CC---T--CTGT-ACTGAATGATC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4754 21 -     84244 T-T------------------T-CC---T--CTGT-ACTGAATGATC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808459 18 +  53390261 ---------------------T-CCTG-C--A--T-AGTGAATGT-C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4317 19 -      8242 ---------------------T-CTCC-T--A--T-ACCAAATGCTT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46322 18 -     83289 C-T------------------T-CCTC-T--T--T-ACTGA---CTA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213118080 21 - 224834208 c-t------------------t-tctg-t--t--t-actgAATACTA
i Cricetulus_griseus.LT883664.1                          I 7 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5883 19 +     87169 ---------------------T-TCTC-T--G--A-ACTGAATGCTC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    647228 21 -   1526836 T-T------------------T-CCTC-C--T--T-GCTGAATGGTG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20417 21 +     50838 T-T------------------T-CCTA-C--G--T-ACGGAGCACTT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   8936 21 +     36344 T-T------------------T-CCTC-C--T--T-ACTGAGTGCAT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29946 21 +     75252 T-T------------------T-CCTC-C--T--T-CCTGAGTGCTC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111476 21 -   2246927 C-T------------------C-CCTC-C--A--C-GCTGCAAGCTC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294420 21 +  12879189 T-T------------------T-CC---T--CCAT-ACTGAAAGCTT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633454 19 -  35494412 ---------------------T-CCTC-C--G--T-GATGAATGCTC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866785 19 -  20541912 ---------------------t-cctc-c--a--c-gctgaatgcgc
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  666020 19 -   1390856 ---------------------t-cctc-t--a--a-actgagtgctc
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140820 19 -    198055 ---------------------t-cccc-t--a--a-actgagtgctc
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100655 13 -    115145 -------------------------------T--T-ACTGAGTGCTT
i Dinomys_branickii.DinBra_scaffold_10381                I 7 C 0
s Dipodomys_ordii.KN672350.1                              18952387 17 -  37912305 ------------------------C-CTC--T--T-TATGAAGACTC
i Dipodomys_ordii.KN672350.1                             I 2 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   7298 17 -     10735 ------------------------C-CTC--T--T-TATGAAGACTC
i Dipodomys_stephensi.DipSte_scaffold_89095              I 2 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 11032 21 +     14636 T-T------------------T-CCTC-C--T--T-ACCGAGTATTC
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62856987 20 - 111700974 G-T------------------C-CTTC-T--T--T-C-AGAATGCTT
i Echinops_telfairi.JH980293.1                           I 1 C 0
s Eidolon_helvum.AWHC01266696.1                               7804 19 +     19438 ---------------------t-tctt-c--a--t-accaaatgctc
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241638 19 -    607251 ---------------------c-cctc-c--c--t-gatgaatgctc
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1227213 14 +  10337057 ----------------------------T--T--T-CCTGAATGCTC
i Elephantulus_edwardii.JH947257.1                       I 3 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33957 21 +    110024 c-t------------------t-cctg-t--t--t-ATGCAATAGTA
i Ellobius_lutescens.LOEQ01008920.1                      I 7 C 0
s Ellobius_talpinus.LOJH01026522.1                           15893 21 +     18970 c-t------------------t-cctg-t--t--t-ATGGAATACTA
i Ellobius_talpinus.LOJH01026522.1                       I 7 C 0
s Enhydra_lutris.KZ291758.1                               24917632 19 +  41312741 ---------------------T-CCTT-C--A--A-ACTGAATGCAC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580380 19 +  14770903 ---------------------T-CCTC-C--G--T-ACCGAATGTGC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042951 19 -   4378816 ---------------------t-cctc-c--a--c-actgaatgctc
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376890 19 +  39960074 ---------------------t-cctc-c--a--c-gctgaatgctc
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412872 19 -    498745 ---------------------T-CCTC-C--A--C-GCTGAATGCTC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667653 19 +   7059049 ---------------------T-CCTC-C--A--T-ACTGAATGTTT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265044 21 +  21539334 t-t------------------t-cc---t--ctat-actgaatgatc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72662 19 -    133382 ---------------------T-CCTC-C--G--T-GATGAATGCTC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               375 19 +     25849 ---------------------T-CCTC-C--G--T-GATGAATGCTC
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16640 21 -     24895 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               44349 21 -     70999 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              88320 21 +    112731 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44883 21 +     68309 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 55207 21 -     65740 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25839 21 -     75513 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 50034 21 -     97555 T-T------------------T-CC---T--TCAT-ACTGAAGGCTT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6758 21 +     30972 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44477 21 -     52037 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60881 21 -    111500 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248339 19 - 206538554 ---------------------T-CCTC-C--A--G-AGCGGATGCTC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185118125 19 - 205367284 ---------------------T-CCTC-C--A--G-AGCGGATGCTC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 29225 19 -     30238 ---------------------T-CCTC-C--A--G-ACTGGATGCTT
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2923981 20 -   3816255 T-T------------------T-CCTC-C-----T-ACTGAGTGCTC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                3271 19 -     28519 a-t------------------t-ca---c--c--t-actgagtgcTG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93355 19 -     95226 ---------------------c-CCTC-C--C--T-GATGAATGTTC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            3159 21 -      6791 T-T------------------T-CCTC-T--T--T-ACCAAATGCTC
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_935316                                 129 21 +     34797 T-T------------------T-CC---T--CTAT-ACTGGATGATC
i Gorilla_beringei.k141_935316                           N 0 C 0
s Gorilla_gorilla.LT578341.1                                258225 21 - 186649187 t-t------------------t-cc---t--ctat-actgaatgATC
i Gorilla_gorilla.LT578341.1                             C 0 I 21
s Graphiurus_murinus.GraMur_scaffold_10447                    4228 21 -     78134 T-T------------------T-TCTC-T--T--A-ACCAAATGCTC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16568 21 -     40692 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37967 21 +     49394 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62838 21 -     66874 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11709 21 -     42923 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18711 21 -     53142 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32316 19 -    327341 ---------------------T-CCTC-T--G--A-ACTGAATGCTC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 11021 19 +     48891 ---------------------c-cctc-c--c--t-gatgaatgctc
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934369 19 -  22651954 T-T------------------T-TCTC-T-----T-AATGAGTGTT-
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1724 21 +      8654 C-C------------------T-TCTC-T--G--T-CCTGAGTTGCC
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                9162 19 -     36432 ---------------------C-CCTC-C--A--T-GATGAATGCTC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553159 19 -   1711038 ---------------------T-CCTC-T--A--T-ACCCAATGCTC
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_790761                 65 19 +       338 ---------------------T-CCTC-T--A--T-ACCCAATGCTC
i Hipposideros_galeritus.HipGal_scaffold_790761          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144698 21 -    630532 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71679 19 +     83186 ---------------------T-TCTC-C--G--A-ACTGAATGCTC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73624 21 +    143317 T-T------------------T-CCTC-C--T--T-ACCAAGTACTC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7729 21 +     12352 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14914 21 +     55766 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054444 21 + 191637585 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803322 21 +  11177569 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9533 21 -    135385 T-T------------------T-CCTC-C--T--T-ACTGAATGCTC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388714 21 +   7955117 T-T------------------T-CCTC-T--C--T-ACTGAATGCTC
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_2415743                                    4247 21 +     11955 T-T------------------T-CC---T--CCAC-ACTGAAGGCTT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11557 19 -     16823 ---------------------T-CCTC-T--G--T-GATGAATGCTC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241555 21 +   9596543 C-T------------------T-CCTC-T--T--T-GTTGGCTGCTT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73398 19 -     97402 ---------------------T-CCTT-C--A--T-GATGAATGCTC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    33934 19 -     49555 ---------------------T-CGTC-C--A--G-ACCGAATGTGC
i Lasiurus_borealis.LasBor_scaffold_26245                C 0 I 49
s Lemur_catta.scaffold_24                                 14761365 21 +  30322482 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10873 21 +     29618 T-T------------------T-CC---T--CCAT-ACTGAAGACTT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10879 21 +     31569 T-T------------------T-CC---T--CCAT-ACTGAAGACTT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10879 21 +     24756 T-T------------------T-CC---T--CCAT-ACTGAAGACTT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10889 21 +     16388 T-T------------------T-CC---T--CCAT-ACTGAAGACTT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        815019 19 -   3914936 ---------------------T-CCTC-C--A--A-ACTGAATGCTC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342742 19 +    662738 ---------------------T-CCTC-C--G--T-GATGAATGCTC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               335979 21 -   1826925 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086388 20 +  43346337 A-C------------------T-TC-C-T--T--T-CCTGAGTGCTC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41616055 18 +  59628241 ---------------------t-ccTC-C--A--A-ACTGAA-ACTC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              47371 21 -     61512 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375033 21 -  60120075 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27301 21 +     30207 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2139 21 -      5035 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27254 21 +     30527 T-T------------------T-CC---T--CTAT-ACTGAATGATG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38430 21 -     50087 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48175 21 +     51645 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417377 21 - 187317192 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401608 21 +  25927173 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50779 21 -     62418 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3310 21 +     14901 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47252 21 +     59329 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273159 21 +    668171 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1791 21 -      5049 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4957 21 +     17132 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224749 19 -    270270 ---------------------T-TCTT-C--A--T-ACCGAATGCTT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324447 21 +  24302211 t-t------------------t-cc---t--ctat-actgaatgatc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359278 21 -    752769 t-t------------------t-cc---t--ctat-actgaatgatc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675068 19 -    737560 ---------------------a-tctc-c--a--c-attgactgctc
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222368 19 +    317179 ---------------------a-tctc-c--a--c-attgactgctc
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502927 21 +  40650429 T-T------------------T-CCTC-C--T--T-ACTGAATGCTC
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151906 19 +    207569 ---------------------T-TCTC-T--C--T-ACCGAATACTT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27747 15 -     74585 ---------------------T-CCTT-C--A--A-ACTG----CTC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 39
s Meriones_unguiculatus.MerUng_scaffold_7390                 52307 20 -    140813 --T------------------C-CTTT-T--A--T-ACTGAATACTA
i Meriones_unguiculatus.MerUng_scaffold_7390             I 2 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     89026 19 +     93471 ---------------------T-CCTC-C--G--T-GATGAATGCTC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986704 21 +  93316391 T-T------------------T-CC---T--CTGT-ACTGAAGGCTT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48170 39 +    145209 A-TACTTCTGCTTCAGTTTGCT-CTTC-T--T--TCC-CGAATGCTC
i Microgale_talazaci.MicTal_scaffold_6613                I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186578 19 +    200668 ---------------------T-CCTC-C--A--T-ACCGAATGAGC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965383 21 +  27267610 c-t------------------t-cctg-t--t--t-aTGGAATACTA
i Microtus_ochrogaster.CM001695.1                        I 7 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364724 19 -   8254450 ---------------------T-CCTC-C--A--T-ACTGAATGCCC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43644 19 -     48117 ---------------------T-CCTC-C--A--T-ACTGAATGCCC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24545 21 -     27822 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        10030 19 +     27589 ---------------------T-CCTC-C--A--A-ACTGAATGCTC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     54486 21 -     62432 T-T------------------T-CT---T--CTGT-ACTGAAGGCTT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   361131 19 +    437263 ---------------------T-CCTC-C--G--T-GATGAATGCTC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180807 19 +    366855 ---------------------T-CCTC-C--C--A-ACCAAATTGGC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27466 19 -     82753 ---------------------c-cctc-c--c--t-gatgaatgctc
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   20046 19 -     63510 ---------------------T-CCTC-T--G--A-ACTGAATGCTC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42677 19 +     47283 ---------------------T-CTTC-C--A--C-ACCAAATGTGC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596560 21 + 120012414 c-t------------------t-cctc-t--t--t-attGACTACTA
i Mus_caroli.LT608237.1                                  I 7 C 0
s Mus_musculus.chr8                                       41690099 21 + 129401213 c-t------------------t-cctc-t--t--t-attGACTACTA
i Mus_musculus.chr8                                      I 7 C 0
s Mus_pahari.LT608297.1                                   58218045 21 +  89631738 C-T------------------T-CCTC-T--T--C-ATTGACTACTA
i Mus_pahari.LT608297.1                                  I 7 C 0
s Mus_spretus.CM004101.1                                  39499018 21 + 130317789 c-t------------------t-cctc-t--t--t-attGACTACTA
i Mus_spretus.CM004101.1                                 I 7 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               1225 21 -    124358 T-T------------------T-TTTC-T--T--T-ACTAAATGCTC
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14356646 19 +  14710649 ---------------------t-cctt-c--a--a-actgAATGGTC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_93829                      4472 21 +     14880 t-T------------------T-CTTC-C--T--T-ACTGAGTGCTC
i Myocastor_coypus.MyoCoy_scaffold_93829                 n 70 C 0
s Myotis_brandtii.KE162005.1                               9794944 19 +  10118263 ---------------------T-CCTC-C--A--C-ACTGAATGTGC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4389119 19 +   6019432 ---------------------T-CCTC-C--A--C-ACCGAATGTGC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               385147 19 +   4330536 ---------------------T-CCTC-C--A--C-ACTGAATGTGC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3932 19 +     18357 ---------------------T-CCTC-C--A--C-ACTGAATGTGC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121258 21 +    130748 T-T------------------T-CCAC-C--A--C-ACTGAAAGCTC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             948203 21 +   3037898 C-T------------------T-CTGC-C--T--T-GCTGAATACTC
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              31322 21 +     34575 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233797 19 -   7148211 ---------------------T-CCTC-C--G--T-GATGAATGCTC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129416 19 -    149072 ---------------------T-CCTC-C--A--T-ACCAAATGCGC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55616 21 -    132029 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11725 21 -     16345 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17610 21 +     22201 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415831 21 -  22158432 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28008 21 -     54323 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199651 18 +   9404916 ---------------------t-ccTC-C--A--A-ACTGAA-ACTC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11057027 21 -  11899542 T-T------------------T-CCTC-C--T--T-CCTGAGGGCTT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453447 19 +   2017862 ---------------------T-CCTC-C--A--A-ACTGAATGCTC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         438553 19 -    630418 ---------------------C-CCTC-C--C--T-GATGAATGCTC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16436 19 +    150152 ---------------------C-CCTC-C--C--T-GATGAATGTTC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    96001 21 -    140218 C-T------------------T-CCTG-T--T--T-ATAGAATACTA
i Ondatra_zibethicus.OndZib_scaffold_7387                I 7 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6579 21 -     41509 C-T------------------T-CCTG-T--T--T-ACTGACTAATA
i Onychomys_torridus.OnyTor_scaffold_28377               I 7 C 0
s Orcinus_orca.KB316932.1                                  8104200 19 +  10937097 ---------------------t-tttc-c--g--t-GATGAATGCTC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1458 14 +     11607 G-T------------------T-CCTC-T--T--T-CCTG-------
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40697 18 +    559221 ---------------------t-ccCC-C--A--A-ACTGAA-ACTC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26406148 19 -  44047080 ---------------------c-cctc-c--c--t-gatgaatgctc
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6667 19 +     17875 ---------------------C-CCTC-C--C--T-GATGAATGCTC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02004362.1                                 1026 21 +      1339 T-T------------------T-CC---T--CTAC-ACTGAATGATC
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             15977 22 -     26668 T-T------------------TCCC---T--CTAT-ACTGAATGATC
i Pan_troglodytes.NBAG03003091.1                         I 29 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   26048 19 -    230217 ---------------------T-CCTC-C--A--G-ACTGGATGCTC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463374 19 -  18783137 ---------------------T-CCTC-C--A--G-ACTGGATGCTC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3974033 19 +   8748460 ---------------------T-CCTC-C--A--G-ACTGGATGCTC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617673 19 +   2937107 ---------------------c-cctc-c--c--t-gatgaatgctc
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   245456 21 - 183742232 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11741 21 +     21308 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294484 21 -  20919399 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24381 21 -     27687 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1060 21 +     10553 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1020 21 -     10386 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16629 19 +     78924 ---------------------T-CCTC-C--A--A-ACTGAATGCTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3756 17 +      9367 ------------------------CCC-C--T--T-TTTGAAGACTC
i Perognathus_longimembris.PerPac_flattened_line_89005   I 2 C 0
s Peromyscus_maniculatus.KI615324.1                         249785 21 +  18517816 c-t------------------t-cctg-t--t--t-actgAATAATA
i Peromyscus_maniculatus.KI615324.1                      I 7 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33905 20 -     56120 C-T------------------T-CCTC-C-----T-ACTGAGAGCTC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5725 19 -     63832 ---------------------T-CCTC-C--G--T-GATGAATGCTC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            4703 21 +     55023 T-T------------------T-CC---T--CTGT-ACTGAATGATC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4225 21 -     89929 T-T------------------T-CC---T--CTGT-ACTGAATGATC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4815 21 +     40849 T-T------------------T-CC---T--CTGT-ACTGAACGATC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256545 21 +  14605196 T-T------------------T-CC---T--CTGT-ACTGAATGATC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5512 19 +     22231 ---------------------T-CCTC-C--A--C-ACAGAATGTGC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2744 19 +     19503 ---------------------T-CCTC-C--G--T-GATGAATGCTC
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Pongo_abelii.CM009266.2                                   181384 21 - 189387572 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196124 21 -   9816681 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29904 21 +     69807 t-t------------------t-cc---t--ctat-actgaatgatc
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47085 21 -     80239 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5715 21 +      7663 C-C------------------T-TCTC-T--G--T-CCTGAGTTGCC
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984513 21 +   4620579 T-T------------------T-CC---T--CCGT-ACTGAAGGCTT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1567999 21 -   2598838 T-T------------------T-CC---T--CCAT-ACGGAAGGCTT
i Propithecus_coquerelli.NW_012148875.1                  I 38 C 0
s Propithecus_coronatus.k141_209299                           5637 21 -      7103 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             6234 21 -     11706 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9971 21 -     30655 T-T------------------T-CC---T--CCAT-ACTGAAGCCTT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          36285 21 +     46564 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96564 21 -     98465 T-T------------------T-CC---T--CCAT-ACGGAAGGCTT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                         10203 21 +     35169 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39844 20 +     52041 --t------------------a-cttt-t--a--t-actgAATACTA
i Psammomys_obesus.NESX01036366.1                        I 7 C 0
s Pteronotus_parnellii.KE847780.1                            53715 19 -     66298 ---------------------T-CCTC-C--A--T-GCCAAATGCAC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6229 19 -     18639 ---------------------T-CCTT-C--A--A-ACTGAATGCTC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842356 19 -  28871421 ---------------------t-tctt-c--a--t-aCTGAATGCTC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538871 19 -   4952924 ---------------------t-tctt-c--a--t-aCCGAATGCTC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100688 19 +  38429054 ---------------------T-CCTC-C--A--G-ACTGGATGCTC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29271 21 +     91421 t-t------------------t-cc---t--ctat-actgaatgatc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155823 21 -   7812017 t-t------------------t-cc---t--ctat-actgaatgatc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10128 21 +     72585 t-t------------------t-cc---t--ctat-actgaatgatc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   598 19 -     55207 ---------------------C-CCTC-C--C--T-GATGAATGCTC
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37024750 14 -  90668790 ----------------------------T--T--T-ACTGACTACAA
i Rattus_norvegicus.chr16                                I 11 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916311 19 +   3329780 ---------------------T-CCTT-T--A--T-ACCAAATGCTC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3733 21 +      7119 T-T------------------T-CC---T--CTAT-CCTGAATGATC
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124403 21 + 195417433 T-T------------------T-CC---T--CTAT-CCTGAATGATC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238575 21 -   7961872 t-t------------------t-cc---t--ctat-cctgaatgatc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76856 19 -    116970 ---------------------T-TCTT-C--A--T-ACCAAATGCTC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9830 19 +     16473 ---------------------C-CCTC-C--C--T-GATGAATGCTC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    117163 18 +    313613 ---------------------T-TCTT-C--A--T-AGTGACTAT-C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                           710 21 +     11297 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31103 21 +     58920 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17601 21 -     45317 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25259 21 -     42441 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27935 21 -     29113 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31012 21 -     48123 T-T------------------T-GC---T--CTAT-ACTGAATGATC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51571 18 +     77746 C-T------------------T-CATC-T--T--C-ACTGAAT---A
i Sigmodon_hispidus.SigHis_scaffold_20193                I 7 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865670 19 -   1910179 ---------------------T-CCTC-C--A--T-ACTGAATTTTC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672775 19 +  18376816 ---------------------t-cctc-c--a--T-TCCAAATGCTC
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1870292  4 +   3870691 T-T------------------T-C-----------------------
i Spermophilus_dauricus.KZ294078.1                       I 1 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525              8300 19 -     97271 ---------------------T-CCTC-C--A--A-ACTAAATGCTC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126466 19 +    196729 ---------------------T-CCTC-T--G--A-ACTGAATGCTC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645516 19 +  69701581 ---------------------T-CCTC-C--A--T-GCTGAATGTTC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393096 21 +   1523678 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15855 19 +     22964 ---------------------T-CCTC-C--A--T-ACCGAATGCTC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4260 21 +      5583 T-T------------------T-CCAC-C--A--C-ACTGAAAGCTC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      193198 19 +    199430 ---------------------t-cctc-c--a--t-actgaatgctc
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    107166 19 -    539355 ---------------------t-cctc-c--a--t-actgaatgctc
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                2530 21 +      9917 T-G------------------T-CC---T--ACAT-ACCGAATGCTC
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9328 21 +     20590 T-G------------------T-CC---T--ACAT-ACCGAATGCTC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355265 21 - 186847797 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26121 19 -     33621 --T------------------T-CCTC-C-----T-ACTGAGTGCTC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21198 18 -     31044 -----------------------CCTC-C--A--C-ACTGACAGCTC
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481707 19 -    610378 ---------------------T-CCTC-C--A--T-ACCGAATATAC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23013 21 +     26378 t-t------------------t-cc---t--ctat-acggaatgatc
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35812 21 -     78344 T-T------------------T-TC---T--CTAT-ACCGAATGATC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22338 21 +     25722 t-t------------------t-cc---t--ctat-acggaatgatc
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30768 21 -     62838 T-T------------------T-TC---T--CTAT-ACTGAATGATC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30757 21 +     46913 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11496 21 -     28527 t-t------------------t-cc---t--ctat-acggaatgatc
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32703 21 -     64340 T-T------------------T-TC---T--CTAT-ACTGAATGATC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30741 21 -     63452 T-T------------------T-TC---T--CTAT-ACTGAATGATC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12188 21 +     22490 T-T------------------T-TC---T--CTAT-ACTGAATGATC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5554 21 -      6147 T-T------------------T-CC---T--CTAT-ACCGAATGATC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12467 21 -     13050 t-t------------------t-cc---t--ctat-acggaatgatc
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257631 21 -   6242583 T-T------------------T-TC---T--CTAT-ACCGAATGATC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3727 21 +     19340 T-T------------------T-CC---T--CTAT-ACTGAATGATC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175447 18 -    200418 ---------------------C--CTC-C--A--T-GATGAATGCTC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6483077 20 -  10818551 G-C------------------T-TCTC-T--T--T-CCTGAGTG-CC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1837242 21 -   4065304 G-T------------------T-CC---CCCA--T-ACCGAATGTGC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      11292 22 -     70247 GTT------------------T-CC---CCCA--T-ACTGAATGTTC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367325 19 -  33153633 ---------------------T-CCTC-C--G--T-GATGAATGCTC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    5126 18 -     21056 ---------------------T-CCTT-T--A--T-ATTGGTTGT-C
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183670  9 +   5085361 --------------------------------------taAATGCTC
i Ursus_maritimus.KK499267.1                             I 3 C 0
s Varecia_rubra.k141_787544                                  27163 21 -     30710 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              26070 21 -    147434 T-T------------------T-CC---T--CCAT-ACTGAAGGCTT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77854 19 +   5488506 ---------------------T-CCTC-C--G--T-GCTGAATGCTC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106420 18 -    112863 ---------------------T-CCTC-C--A--A-ACTGAA-ACTC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        176013 21 -    224448 T-T------------------T-CTTC-C--T--T-ACTGAATGCTC
i Xerus_inauris.XerIna_scaffold_2302                     I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30659 19 -     86975 ---------------------T-CCTC-C--A--A-ACTGAATGCTC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1429 21 -      1899 C-T------------------T-CCTC-T--T--T-GCTGGATGCCC
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Saimiri_ustus.k141_360372                                  31938  0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16784  0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29383  0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32692  0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       32306  0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110739  0 + 121099817 C
e Callibella_humilis.k141_1233062                            11864  0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607826  0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_147047                  350  0 +     10270 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Sapajus_macrocephalus.k141_796559                           9558  0 +     21866 C
e Sapajus_apella.ctg103                                     239968  0 +   5703754 C
e Saguinus_oedipus.k141_1368863                                616  0 +     10417 C
e Saguinus_mystax.k141_6319370                                1276  0 +     10149 C
e Saguinus_midas.LG03                                       394567  0 - 209938924 C
e Saguinus_labiatus.k141_264497                               3661  0 -      7443 C
e Saguinus_inustus.k141_4502137                                856  0 +      4564 C
e Saguinus_imperator.k141_2710097                            15976  0 -     24931 C
e Saguinus_geoffroyi.k141_356064                               373  0 +      9876 C
e Saguinus_bicolor.k141_161125                                8912  0 +     12412 C
e Plecturocebus_moloch.k141_1031110                          45651  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          44184  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      16258  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          9331  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          44283  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          9332  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44634  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       44240  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4836  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9754  0 +     39866 C
e Pithecia_vanzolinii.k141_1369553                           33337  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              558323  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33353  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33593  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               33317  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7569  0 -     25401 C
e Pithecia_albicans.k141_1239476                             66481  0 +    207309 C
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mico_schneideri.k141_1877700                                     20782  0 -     26561 C
e Mico_humeralifer.k141_1180625                              12463  0 -     12984 C
e Mico_argentatus.k141_582562                                11963  0 +     17804 C
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Leontopithecus_rosalia.k141_1583055                         5369  0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      567  0 +      8855 C
e Leontocebus_nigricollis.k141_1320036                         377  0 +      3713 C
e Leontocebus_illigeri.k141_2759473                            734  0 -     14280 C
e Leontocebus_fuscicollis.k141_3470480                         421  0 -     23187 C
e Lagothrix_lagothricha.k141_246028                          44940  0 +    110728 C
e Chiropotes_sagulatus.k141_1113111                           9664  0 +     34062 C
e Chiropotes_israelita.k141_313004                           44113  0 -    112038 C
e Chiropotes_albinasus.k141_1091259                          33016  0 -     52013 C
e Cheracebus_torquatus.k141_890198                           21042  0 +     39636 C
e Cheracebus_regulus.k141_471822                             21253  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20998  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10585  0 -     32913 C
e Cebus_unicolor.k141_1654760                                68744  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9648  0 -     34880 C
e Cebus_albifrons.Contig27                                  374591  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44838  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6780  0 -     12580 C
e Callithrix_kuhlii.k119_102356                               3381  0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455859  0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3470  0 -      8861 C
e Callimico_goeldii.k141_1609886                             11377  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         22212  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  22299  0 +     95584 C
e Cacajao_calvus.k141_89051                                  44773  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9479  0 +     28062 C
e Ateles_paniscus.k141_866194                                24673  0 -     33135 C
e Ateles_marginatus.k141_970259                              50615  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              35246  0 +     44353 C
e Ateles_chamek.k141_615173                                   7690  0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12555  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276389  0 +  21539123 C
e Aotus_vociferans.k141_1514463                               3326  0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3767  0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673773  0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3491  0 -     15923 C
e Aotus_azarae.k141_887050                                    2866  0 +     17741 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Alouatta_seniculus.k141_928287                             34633  0 +     42133 C
e Alouatta_puruensis.k141_251022                             10499  0 +     30854 C
e Alouatta_palliata.k141_638677                              48326  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42677  0 +     45454 C
e Alouatta_macconnelli.k141_1277969                           1160  0 -      3959 C
e Alouatta_juara.k141_1687208                                44052  0 -     64179 C
e Alouatta_discolor.k141_2561099                             45595  0 +     55831 C
e Alouatta_caraya.k141_1109140                               46162  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73924  0 -     84148 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       9086 21 +     36723 CA-T---AC-TA-TCC-GTTT-A---AC-TTT-G
s Acinonyx_jubatus.LLWD01001279.1                           814448 21 +   1699592 GC-T---AC-TG-CCT-ATTT-A---AC-TTT-g
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27768  2 +     63021 CA--------------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20417115 21 +  29979442 TG-T---AC-TG-CCC-ATAT-A---CC-TTT-G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            217235 21 +    347723 TG-C---AC-TG-CCC-ATAT-A---AC-TTT-G
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    20016 20 -     61208 -A-C---AG-TA-ACC-CTTT-C---AC-TCC-A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50036 21 +     53615 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2063 21 +     13857 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18618 21 -     21945 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20303 21 +     32033 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587300 21 +   2318259 tA-T---GC-TG-CCC-ATTT-A---AC-TTT-T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52377 21 -     68529 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25895 21 -     32367 CA-T---AA-TA-TCC-ACTT-A---AC-TTT-G
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6947 21 -     15198 CA-T---AC-TG-CCC-CTTG-A---AT-TTC-A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Avahi_laniger.k141_2756659                                  8126 21 +     11645 CA-T---AC-TA-TCT-GTTT-A---AC-TTC-G
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               8134 21 -     19611 CA-T---AC-TA-TCT-GTTT-T---AC-TTC-G
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7965067 21 -  23207421 CG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1567 21 -     25979 CG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88307 21 +    124022 tG-T---AC-TG-CCC-ATTT-A---AC-TTT-T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23836 21 +    288883 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20358226 21 +  48749331 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756790 21 +   1948126 tg-t---ac-tg-ccc-attt-a---ac-ttt-t
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546932 21 -  45695690 tg-t---ac-tg-ccc-attt-a---ac-ttt-t
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531940 21 -   4408762 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632537 21 +  17673402 tt-t---ac-ca-ccc-attt-a---ac-ttT-G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666824 21 +   7040546 TT-T---AC-CA-CCC-ATTT-A---AC-TTT-G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210482 21 +   1652518 tt-t---ac-ca-ccc-attt-a---ac-ttT-G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506804 20 +  60362399 C--T---AC-TG-CCC-ATAT-A---AC-TTT-T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10440 20 -     23171 C--T---AC-TG-CCC-ATAT-A---AC-TTT-T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223783 20 +   9314153 C--T---AC-TG-CCC-Atat-a---ac-ttt-t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616918 20 +  59632846 C--T---AC-TG-CCC-Atat-a---ac-ttt-t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108499 20 -  63665305 C--T---AC-TG-CCC-Atat-a---ac-ttt-t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27411029 21 -  46296322 tA-T---GC-TG-CCC-ATTT-A---AC-TTT-T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26593303 21 +  44709034 TA-T---GC-TG-CCC-ATTT-A---AC-TTT-T
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1367 21 -      1607 GG-T---AC-TA-CCC-ATTC-A---AC-TTC-G
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272673 14 +    496798 -------------TCT-ATTT-A---AC-TGT-A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1817 21 +      9923 TG-T---AC-TG-CCT-GTTG-A---AC-TTC-A
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29553 20 -     39886 -A-T---AC-TA-TCT-ATTT-C---AC-TTT-G
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     81134 21 -    217609 TG-T---TC-TG-CCC-ACTT-A---AC-TTT-G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4998235 21 +  23392119 CA-T---AC-TA-CCC-ACTT-A---AC-TTC-A
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001677 21 +  23407841 CA-T---TC-TA-CCC-ACTC-A---AC-TTC-A
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64756 21 -     66877 CA-T---TC-TA-CCC-ACTC-A---AC-TTC-A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4632 14 -      5494 -------------TCT-ATTT-A---AC-TTT-A
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493767 21 -  27778364 CG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20600 21 +     27315 CG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143118 21 -   4669795 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46857 21 +     47900 ca-t---ac-ca-tct-gctt-A---AC-TTT-G
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2290 21 -     14410 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46672 21 -    148725 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28950 21 -     40656 CA-T---AC-CA-CCT-GCTT-A---AC-TTT-G
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8909 21 +     20796 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14023 21 -     17524 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29755 21 -     34525 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13535 21 -     25376 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366122 21 -  39242232 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271849 21 +  21565898 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34214 21 -     45857 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29115 21 -     32606 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5278 21 +      8499 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27676 21 +     70610 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24637 21 +     36323 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            14122 21 -     19938 CT-T---GG-TG-CCC-ATGA-A---AC-TTT-G
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             32534 16 -     33796 CA-T---AT-CA-TCT-ATTT-A---A-------
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             7037 16 -     15404 CA-T---AT-CA-TCT-ATTT-A---A-------
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240594 21 -   2543920 CA-C---AC-TA-CAC-ATTT-C---AC-TTT-G
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                                345538 21 +  18827391 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12077 21 -     44032 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306923 21 - 135778131 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                213 20 -      4087 TT-C----A-TT-TCC-ATCT-A---GC-TGG-C
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             411336 21 -   2368649 GG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381218 21 - 200372422 GG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4775 21 -     84244 CG-T---AC-TA-TCT-GCTT-A---AC-TTT-G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808477 21 +  53390261 TA-T---AC-TG-CCT-CTTT-A---AC-TTT-G
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4336 24 -      8242 TG-T---AT-TG-CCA-ATTT-AAATAC-TTT-G
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 174
s Cricetomys_gambianus.CriGam_scaffold_14425                 46340  2 -     83289 CA--------------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213118101  2 - 224834208 CA--------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5902 21 +     87169 TA-T---AC-TG-CCT-ACAT-A---AC-TTT-G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    647249 21 -   1526836 CC-T---AC-TG-TCC-CCTG-A---GC-CGT-G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20438 21 +     50838 GG-T---AC-CA-TCC-ATTC-A---AC-TTT-G
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   8957 21 +     36344 CA-T---AC-TA-CCC-ATTC-A---AC-TTT-G
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29967 22 +     75252 CATT---AC-TA-CCC-GCTC-A---AC-TTG-G
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111497 21 -   2246927 CT-C---GG-TG-CCC-AGGA-A---AC-TTT-G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294441 21 +  12879189 CA-C---AC-TT-TCT-ATTT-A---GC-TTC-A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633473 21 -  35494412 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866804 21 -  20541912 tG-T---AC-TG-CCC-ATTG-A---AC-TTC-A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  666039 21 -   1390856 CG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140839 21 -    198055 CG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100668 21 -    115145 CA-C---AC-TA-CCT-ATTT-A---AC-TTT-G
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952404 11 -  37912305 AT-T---AC-TA-CAC-A----------------
i Dipodomys_ordii.KN672350.1                             C 0 I 4
s Dipodomys_stephensi.DipSte_scaffold_89095                   7315 11 -     10735 AT-T---AC-TA-CAC-A----------------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 4
s Dolichotis_patagonum.DolPat_scaffold_80628                 11053 21 +     14636 CA-T---AC-TA-CTC-ACTC-A---AC-TTC-A
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62857007 20 - 111700974 CA-T----ACTG-CCC-ATCT-A----C-ATC-C
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7823 21 +     19438 tG-T---AC-TG-ACC-ATTT-T---AC-TTC-A
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241657 21 -    607251 tG-T---AC-TG-Ccc-gttt-a---ac-ttt-t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1227227 21 +  10337057 TT-T----A-CTGACC-AACT-A---AC-TTT-C
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33978  2 +    110024 AA--------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15914  2 +     18970 CA--------------------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917651 21 +  41312741 TG-T---AC-TG-CTT-ATAT-A---AC-TTT-G
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580399 21 +  14770903 TG-C---AC-TG-CCC-ATTT-A---AC-TAC-A
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042970 21 -   4378816 tg-t---ac-cg-ccc-attt-a---ac-ttt-g
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376909 21 +  39960074 tG-T---AC-CG-CCC-ATTT-A---AC-TTT-G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412891 21 -    498745 TG-T---AC-CG-CCC-ATTT-A---AC-TTT-G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667672 21 +   7059049 CA-T---AC-TG-TCC-ATTT-A---AC-TTT-A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265065 21 +  21539334 ca-t---ac-ca-tct-gcct-a---ac-ttt-g
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72681 21 -    133382 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               394 21 +     25849 TG-T---AC-TG-TGC-ATTT-A---AC-TTT-G
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16661 21 -     24895 CA-T---AC-TA-TCT-GTTT-A---AC-TTT-G
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               44370 21 -     70999 CA-T---AC-TA-TCT-GTTT-A---AC-TTT-G
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              88341 21 +    112731 CA-T---AC-TA-TCT-GTTT-A---AC-TTT-G
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44904 21 +     68309 CA-T---AC-TC-TCT-GTTT-A---AC-TTT-G
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 55228 21 -     65740 CA-T---AC-TA-TCT-GTTT-A---AC-TTT-G
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25860 21 -     75513 CA-T---AC-TA-TCT-GTTT-A---AC-TTT-G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 50055 21 -     97555 CA-T---AC-TA-TCT-GTTT-A---AC-TTT-G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6779 21 +     30972 CA-T---AC-TA-TCT-GTTT-A---AC-TTT-G
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44498 21 -     52037 CA-T---AC-TA-TCT-GTTT-A---AC-TTT-G
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60902 21 -    111500 CA-T---AT-TA-TCT-GTTT-A---AC-TTT-G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248358 21 - 206538554 GC-T---AC-TG-CCT-ATTG-A---AC-TTT-g
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185118144 21 - 205367284 GC-T---AC-TG-CCT-ATTG-A---AC-TTT-g
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 29244 21 -     30238 GC-T---AC-TG-CCT-ATTT-A---AC-TTT-G
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2924001 21 -   3816255 CA-T---AT-TA-CCC-ATTC-A---AC-TTT-G
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                3290 21 -     28519 CC-T---AC-TA-TCC-ATTT-A---AC-TTT-G
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93374 22 -     95226 TG-T---AC-TG-CCC-ATTT-A---AC-TTTTT
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            3180 21 -      6791 CA-T---AA-TA-CCC-ATTT-A---AC-TTT-G
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_935316                                 150 21 +     34797 CA-T---AC-TA-TCC-ATTT-A---AC-TTT-G
i Gorilla_beringei.k141_935316                           C 0 C 0
s Gorilla_gorilla.LT578336.1                                 74745 21 +  33314783 CA-T---AC-TA-TCC-ATTT-A---AC-TTT-G
i Gorilla_gorilla.LT578336.1                             I 188 I 444
s Graphiurus_murinus.GraMur_scaffold_10447                    4249 21 -     78134 CA-T---GA-TA-TCC-ACTT-A---AA-TTT-G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16589 21 -     40692 CA-T---AC-TA-TCT-ATTT-A---AC-TTT-G
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             37988 21 +     49394 CA-T---AC-TA-TCT-ATTT-A---AC-TTT-G
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62859 21 -     66874 CA-T---AC-TA-TCT-ATTT-A---AC-TTT-G
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11730 21 -     42923 CA-T---AC-TA-TCT-ATTT-A---AC-TTT-G
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18732 21 -     53142 CA-T---AC-TA-TCT-ATTT-A---AC-TTT-G
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32335 21 -    327341 TA-T---AC-TG-CCC-GTAT-A---CC-TTT-G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 11040 21 +     48891 tA-T---AC-TG-CCC-ATTT-A---AC-TTT-T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934388 21 -  22651954 CA-T---AC-TA-CGC-ATTC-A---AC-TTT-G
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1745 20 +      8654 TT-T----T-CT-GTC-ATCT-A---AA-TTT-C
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                9181 21 -     36432 TG-T---GC-TG-CCC-ATTT-A---AC-TGT-G
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 1
s Hipposideros_armiger.JXIK01000431.1                      1553178 21 -   1711038 TG-T---AT-TG-CCC-ATTT-A---AC-TTT-G
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_790761                 84 21 +       338 TG-T---AT-TG-CCC-ATTT-A---AC-TTT-G
i Hipposideros_galeritus.HipGal_scaffold_790761          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144719 21 -    630532 CA-T---AC-TA-TCC-GTTT-A---AC-TTT-G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71698 19 +     83186 TG-T---AC-TG-CCT-ATAT-A---AC---T-G
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73645 13 +    143317 CA-T---AC-TA-CCC-ACT--------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 2
s Hylobates_agilis.k141_1155965                               7750 21 +     12352 CA-T---AC-TA-TCC-GTTT-A---AC-TTT-G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14935 21 +     55766 CA-T---AC-TA-TCC-GTTT-A---AC-TTT-G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054465 21 + 191637585 CA-T---AC-TA-TCC-GTTT-A---AC-TTT-G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803343 21 +  11177569 CA-T---AC-TA-TCC-GTTT-A---AC-TTT-G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9554 21 -    135385 CA-T---AC-TA-TCC-ATTC-A---AC-TTT-G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388735 21 +   7955117 CC-C---AT-AA-GCC-ACTT-C---AC-TTT-C
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    4268 21 +     11955 CA-T---GC-TA-TCT-GTTT-A---AC-TTC-G
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11576 21 -     16823 TG-T---AC-TG-CCC-TTTT-A---AC-TTT-G
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241576 18 +   9596543 -A-C---AG-TA-GCC-CCTT-C---AC-TC---
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73417 21 -     97402 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64696 21 -     65777 TG-C---AC-TG-CCC-ATTG-A---AC-TAC-A
i Lasiurus_borealis.LasBor_scaffold_16567                I 48 C 0
s Lemur_catta.scaffold_24                                 14761386 21 +  30322482 CA-T---AC-TA-TCT-ATTT-A---AC-TTT-G
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10894 21 +     29618 CA-T---AC-TA-TCT-ATTT-A---AC-TTT-G
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10900 21 +     31569 CA-T---AC-TA-TCT-ATTT-A---AC-TTT-G
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10900 21 +     24756 CA-T---AC-TA-TCT-ATTT-A---AC-TTT-G
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10910 21 +     16388 CA-T---AC-TA-TCT-ATTT-A---AC-TTA-G
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        815038 21 -   3914936 TG-T---AC-TG-CCC-ATAA-A---AC-TTT-G
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342761 21 +    662738 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336000 21 -   1826925 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086408 20 +  43346337 TT-T----A-CT-GCC-CTCT-A---AC-TTT-C
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41616073 20 +  59628241 C--T---AC-TG-CCC-atat-a---ac-ttt-t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              47392 21 -     61512 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375054 21 -  60120075 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27322 21 +     30207 CA-T---AC-CA-TCT-GCCT-A---AC-TTT-G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2160 21 -      5035 CA-T---AC-CA-TCT-GCCT-A---AC-TTT-G
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27275 21 +     30527 CA-T---AC-CA-TCT-GCCT-A---AC-TTT-G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38451 21 -     50087 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48196 21 +     51645 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417398 21 - 187317192 CA-T---AC-CA-TCT-GCCT-A---AC-TTT-G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401629 21 +  25927173 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50800 21 -     62418 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3331 21 +     14901 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47273 21 +     59329 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273180 21 +    668171 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1812 21 -      5049 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4978 21 +     17132 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224768 21 -    270270 TG-T---AC-TG-CCC-ATTT-T---AC-TTT-G
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324468 21 +  24302211 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359299 21 -    752769 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675087 21 -    737560 tg-t---gt-tg-cct-attt-a---at-ttt-c
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222387 21 +    317179 tg-t---gt-tg-cct-attt-a---at-ttt-c
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502948 21 +  40650429 CC-T---AC-AA-GCC-ACTT-C---AA-TTT-C
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       151925 21 +    207569 TG-T---GT-TG-CCT-GTTT-A---AC-TTT-A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 183
s Mellivora_capensis.MelCap_flattened_line_19308             27801 21 -     74585 TA-T---AC-TG-CTC-ATAT-A---AC-TTT-G
i Mellivora_capensis.MelCap_flattened_line_19308         I 39 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52327  2 -    140813 CT--------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     89045 21 +     93471 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986725 16 +  93316391 CA-T---GT-CA-TCT-ATtt-a---a-------
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48209 21 +    145209 TC-T----CCTG-CCC-GTCG-A----CTGTT-C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186597 21 +    200668 TG-T---AC-TG-CCT-GTTG-A---AC-TTC-A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965404  2 +  27267610 CA--------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364743 21 -   8254450 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43663 21 -     48117 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24566 21 -     27822 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        10049 21 +     27589 TG-T---AC-TG-CCC-ATAA-A---AC-TTT-G
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     54507 16 -     62432 CA-T---GT-CA-TCT-ATTT-A---A-------
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   361150 21 +    437263 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180826 21 +    366855 CG-T---GC-TG-CCT-ATTG-A---AC-TTC-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27485 21 -     82753 tg-t---ac-cg-ccc-attt-a---ac-ttT-T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   20065 21 -     63510 TA-T---AC-TG-CCC-ATAT-A---CC-TTT-G
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42696 21 +     47283 TG-C---AC-TG-ACC-ATTT-A---AC-TAC-T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596581  2 + 120012414 CA--------------------------------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41690120  2 + 129401213 CA--------------------------------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58218066  2 +  89631738 CA--------------------------------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39499039  2 + 130317789 CA--------------------------------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               1246 21 -    124358 CA-T---TA-CA-TCC-ATTT-T---AC-TTT-T
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14356665 21 +  14710649 TG-T---AC-TG-CTC-ATAT-A---AC-TTT-G
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_93829                      4493 21 +     14880 AG-T---AC-TG-CCC-TTTC-T---AC-TTT-G
i Myocastor_coypus.MyoCoy_scaffold_93829                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794963 21 +  10118263 TG-C---AC-CG-CCC-ATTT-A---AC-TAC-A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4389138 21 +   6019432 TG-C---AC-TG-CCC-ATTT-A---AC-TAC-A
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               385166 21 +   4330536 TG-C---AC-TG-CCC-ATTT-A---AC-TAC-A
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3951 21 +     18357 TG-C---AC-TG-CCC-ATTT-A---AC-TAC-A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121279 21 +    130748 CT-T---GG-TG-TTC-ATCA-A---AC-TTT-G
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             948224  5 +   3037898 CA-G---AC-------------------------
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              31343 21 +     34575 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233816 21 -   7148211 TG-T---AC-CG-CCC-ATTT-A---AC-TTT-G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129435 21 -    149072 TG-T---AC-TG-CAC-ATTG-A---CC-TTT-G
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55637 21 -    132029 CA-T---AC-TA-TCC-GTTT-A---AC-TTT-G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11746 21 -     16345 CA-T---AC-TA-TCC-GTTT-A---AC-TTT-G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17631 21 +     22201 CA-T---AC-TA-TCC-GTTT-A---AC-TTT-G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415852 21 -  22158432 CA-T---AC-TA-TCC-GTTT-A---AC-TTT-G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28029 21 -     54323 CA-T---AC-TA-TCC-GTTT-A---AC-TTT-G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199669 20 +   9404916 C--T---AC-TG-CCc-atat-a---ac-ttt-t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11057048 21 -  11899542 GG-C---AC-CA-CCC-ATTC-A---AC-TTT-G
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453466 21 +   2017862 TG-T---AC-TG-CCC-ATAT-A---AC-TTT-G
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         438572 21 -    630418 TG-T---AC-TG-ccc-attt-a---ac-ttt-t
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16455 22 +    150152 TG-T---AC-TG-CCC-ATTT-A---AC-TTTTT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    96022  2 -    140218 CA--------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6600  2 -     41509 CA--------------------------------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8104219 21 +  10937097 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1472 14 +     11607 -------------CCC-ATCT-A---AC-TTT-C
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40715 20 +    559221 C--T---AC-TG-CCC-atat-a---ac-ttt-t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26406167 21 -  44047080 tA-T---AC-TG-CCC-ATTT-A---AC-TTT-T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6686 21 +     17875 TA-T---GC-TG-CCC-ATTT-A---AC-TTT-T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02004362.1                                 1047 21 +      1339 CA-T---AC-TA-TCC-ATTT-A---AC-TTT-G
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             15999 22 -     26668 CA-T---AC-TA-TCC-ATTTAA---AC-TTT-G
i Pan_troglodytes.NBAG03003091.1                         C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   26067 21 -    230217 GC-T---AC-TG-CCT-ATTT-A---AC-TTT-G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463393 21 -  18783137 GC-T---AC-TG-CCT-ATTT-A---AC-TTT-g
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3974052 21 +   8748460 GC-T---AC-TG-CCT-ATTT-A---AC-TTT-g
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617692 21 +   2937107 tC-T---AC-TG-CCC-ATTA-A---AC-TTT-T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   245477 21 - 183742232 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11762 21 +     21308 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294505 21 -  20919399 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24402 21 -     27687 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1081 21 +     10553 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1041 21 -     10386 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16648 21 +     78924 TG-T---AC-TG-CCT-ATAT-A---AC-TTT-G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3773 11 +      9367 AT-T---CC-TA-CAT-A----------------
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 4
s Peromyscus_maniculatus.KI615324.1                         249806  2 +  18517816 CA--------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33925 21 -     56120 TA-T---GC-TG-CCT-ATTC-A---AC-TTT-C
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5744 21 -     63832 TG-T---AC-CG-CCC-ATTT-A---AC-TTT-G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            4724 21 +     55023 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4246 21 -     89929 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4836 21 +     40849 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256566 21 +  14605196 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5531 21 +     22231 TG-C---AC-CA-CCC-ATTT-A---AC-TAT-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2763 21 +     19503 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Pongo_abelii.CM009266.2                                   181405 21 - 189387572 CA-T---AC-TA-TCC-ATTT-A---AC-TTT-G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196145 21 -   9816681 CA-T---AC-TA-TCC-ATTT-A---AC-TTT-G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29925 21 +     69807 ca-t---ac-ca-tct-gctt-a---ac-ttt-g
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47106 21 -     80239 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5736 20 +      7663 TT-T----T-CT-GTC-ATCT-A---AA-TTT-C
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984534 21 +   4620579 CA-T---AC-TA-TCT-ATTT-A---AC-TTT-G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1568020 21 -   2598838 CA-T---AC-TA-TCT-GTTT-A---AC-TTC-G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5658 21 -      7103 CA-T---AC-TA-TCT-GTTT-A---AC-TTC-G
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             6255 21 -     11706 CA-T---AC-TA-TCT-GTTT-A---AC-TTC-G
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                            9992 21 -     30655 CA-T---AC-TA-TCT-GTTT-A---AC-TTC-G
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          36306 21 +     46564 CA-T---AC-TA-TCT-GTTT-A---AC-TTC-G
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96585 21 -     98465 CA-T---AC-TA-TCT-GTTT-A---AC-TTC-G
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                         10224 21 +     35169 CA-T---AC-TA-TCT-GTTT-A---AC-TTC-G
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39864  2 +     52041 CT--------------------------------
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53734 21 -     66298 TG-T---AC-TG-CCC-CCTG-A---AC-TTT-G
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6248 21 -     18639 TG-T---AC-TG-CTT-ATAG-A---AC-TTT-G
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842375 21 -  28871421 TG-T---AC-TG-CCC-ATTT-T---AC-TTC-G
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538890 21 -   4952924 TG-T---AC-TG-CCC-ATTT-T---AC-TTC-G
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100707 21 +  38429054 GC-T---AC-TG-CCT-ATTT-A---AC-TTT-g
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29292 21 +     91421 cg-t---ac-ca-tct-gctt-a---ac-ttt-g
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155844 21 -   7812017 cg-t---ac-ca-tct-gctt-a---ac-ttt-g
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10149 21 +     72585 cg-t---ac-ca-tct-gctt-a---ac-ttt-g
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   617 20 -     55207 TG-T---AC-TG-CCC-ATTT-A---AC-TT--T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37024764  2 -  90668790 CA--------------------------------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916330 21 +   3329780 TG-T---AT-TG-CCC-ATTT-A---AC-TCT-G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3754 21 +      7119 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124424 21 + 195417433 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238596 21 -   7961872 cg-t---ac-ca-tct-gctt-a---ac-ttt-g
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76875 21 -    116970 TG-T---AC-TG-ATC-ATTT-T---AC-TTC-A
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9849 21 +     16473 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    117181 21 +    313613 CA-T---AC-TT-CCC-CTTT-A---AC-TCT-G
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                           731 21 +     11297 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31124 21 +     58920 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17622 21 -     45317 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25280 21 -     42441 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27956 21 -     29113 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31033 21 -     48123 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51589  2 +     77746 CA--------------------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865689 20 -   1910179 CA-T---A--TG-TCC-ATTT-A---AC-TTT-G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672794 21 +  18376816 TA-T---AT-TA-Cac-attt-a---aa-ttt-g
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1870299 21 +   3870691 CC-T---AC-AA-GCC-ACTT-C---AC-TTT-C
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8319 21 -     97271 TA-T---AT-TG-TCC-ATAT-A---AC-TTT-G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126485 21 +    196729 TA-T---AC-TG-CCC-ATAT-A---CC-TTT-G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645535 21 +  69701581 TA-T---TC-TC-TCT-ACTT-A---AC-TCT-G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393117 21 +   1523678 CA-T---AC-TA-TCC-GTTT-A---AC-TTT-G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15874 21 +     22964 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4281 21 +      5583 CT-T---GG-TG-TCC-ATCA-A---AC-TTT-G
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      193217 21 +    199430 tg-c---cc-tg-ccc-attt-a---ac-ttt-g
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    107185 21 -    539355 tg-c---cc-tg-ctc-attt-a---ac-ttt-g
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                2551 24 +      9917 CA-CCAAAC-TA-TCT-ATTT-A---AC-TTT-A
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9349 24 +     20590 CA-CCAAAC-TA-TCT-ATTT-A---AC-TTT-A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355286 21 - 186847797 CA-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26140 21 -     33621 CA-T---GC-TA-CCC-ATTC-A---AC-TTT-T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21216 21 -     31044 GT-T---GG-TG-TCC-ATTA-G---AC-TTT-G
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481726 21 -    610378 TG-T---AC-TG-CCC-AATG-A---AC-TTC-A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23034 21 +     26378 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35833 21 -     78344 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22359 21 +     25722 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30789 21 -     62838 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30778 21 +     46913 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11517 21 -     28527 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32724 21 -     64340 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30762 21 -     63452 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12209 21 +     22490 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5575 21 -      6147 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12488 21 -     13050 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257652 21 -   6242583 CG-T---AC-CA-TCT-GCTT-A---AC-TTT-G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3748 21 +     19340 CG-C---AC-CA-TCT-GCTT-A---AC-TTT-G
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175465 21 -    200418 TA-T---AC-TA-TCC-ATTT-A---AC-TTT-G
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6483097 21 -  10818551 TT-T----A-CT-GCCCATCT-A---AC-CTT-C
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1837263 21 -   4065304 CA-T---AC-TA-TCC-ACTT-A---AC-TCT-G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      11314 21 -     70247 CA-T---AC-TA-TCC-ACTT-A---AC-TTT-G
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367344 21 -  33153633 TG-T---AC-TG-CCC-ATTT-A---AC-TTT-G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    5144 21 -     21056 CA-T---AG-TG-CAC-TTTT-A---AC-TTT-G
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183679 21 +   5085361 TG-T---AC-TG-CCC-ATAT-A---CC-TTT-G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  27184 21 -     30710 CA-T---AC-TA-TCT-ATTT-A---AC-TTC-G
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              26091 21 -    147434 CA-T---AC-TA-TCT-ATTT-A---AC-TTC-G
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77873 21 +   5488506 TT-T---AC-CG-CCC-ATTT-A---AC-TTT-G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106438 20 -    112863 C--T---AC-TG-CCC-ATAT-A---AC-TTT-T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        176034 21 -    224448 CA-T---AC-TA-GCT-ACTT-A---AC-TTT-A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30678 21 -     86975 TG-T---AC-TG-CCC-ATAT-A---AC-TTT-G
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1450 20 -      1899 -A-A---AC-TC-ACC-ATTT-C---AC-TCT-G
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Saimiri_ustus.k141_360372                                  31938  0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16784  0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29383  0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32692  0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       32306  0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110739  0 + 121099817 C
e Callibella_humilis.k141_1233062                            11864  0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607826  0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_147047                  350  0 +     10270 C
e Lepus_americanus.LepAme_scaffold_56121                     19282 527 +     24238 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Sapajus_macrocephalus.k141_796559                           9558  0 +     21866 C
e Sapajus_apella.ctg103                                     239968  0 +   5703754 C
e Saguinus_oedipus.k141_1368863                                616  0 +     10417 C
e Saguinus_mystax.k141_6319370                                1276  0 +     10149 C
e Saguinus_midas.LG03                                       394567  0 - 209938924 C
e Saguinus_labiatus.k141_264497                               3661  0 -      7443 C
e Saguinus_inustus.k141_4502137                                856  0 +      4564 C
e Saguinus_imperator.k141_2710097                            15976  0 -     24931 C
e Saguinus_geoffroyi.k141_356064                               373  0 +      9876 C
e Saguinus_bicolor.k141_161125                                8912  0 +     12412 C
e Plecturocebus_moloch.k141_1031110                          45651  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          44184  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      16258  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          9331  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          44283  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          9332  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44634  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       44240  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4836  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9754  0 +     39866 C
e Pithecia_vanzolinii.k141_1369553                           33337  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              558323  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33353  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33593  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               33317  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7569  0 -     25401 C
e Pithecia_albicans.k141_1239476                             66481  0 +    207309 C
e Oryctolagus_cuniculus.CM000791.1                       107105963 503 - 174332312 I
e Mico_schneideri.k141_1877700                                     20782  0 -     26561 C
e Mico_humeralifer.k141_1180625                              12463  0 -     12984 C
e Mico_argentatus.k141_582562                                11963  0 +     17804 C
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Leontopithecus_rosalia.k141_1583055                         5369  0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      567  0 +      8855 C
e Leontocebus_nigricollis.k141_1320036                         377  0 +      3713 C
e Leontocebus_illigeri.k141_2759473                            734  0 -     14280 C
e Leontocebus_fuscicollis.k141_3470480                         421  0 -     23187 C
e Lagothrix_lagothricha.k141_246028                          44940  0 +    110728 C
e Chiropotes_sagulatus.k141_1113111                           9664  0 +     34062 C
e Chiropotes_israelita.k141_313004                           44113  0 -    112038 C
e Chiropotes_albinasus.k141_1091259                          33016  0 -     52013 C
e Cheracebus_torquatus.k141_890198                           21042  0 +     39636 C
e Cheracebus_regulus.k141_471822                             21253  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20998  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10585  0 -     32913 C
e Cebus_unicolor.k141_1654760                                68744  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9648  0 -     34880 C
e Cebus_albifrons.Contig27                                  374591  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44838  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6780  0 -     12580 C
e Callithrix_kuhlii.k119_102356                               3381  0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455859  0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3470  0 -      8861 C
e Callimico_goeldii.k141_1609886                             11377  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         22212  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  22299  0 +     95584 C
e Cacajao_calvus.k141_89051                                  44773  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9479  0 +     28062 C
e Ateles_paniscus.k141_866194                                24673  0 -     33135 C
e Ateles_marginatus.k141_970259                              50615  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              35246  0 +     44353 C
e Ateles_chamek.k141_615173                                   7690  0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12555  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276389  0 +  21539123 C
e Aotus_vociferans.k141_1514463                               3326  0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3767  0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673773  0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3491  0 -     15923 C
e Aotus_azarae.k141_887050                                    2866  0 +     17741 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Alouatta_seniculus.k141_928287                             34633  0 +     42133 C
e Alouatta_puruensis.k141_251022                             10499  0 +     30854 C
e Alouatta_palliata.k141_638677                              48326  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42677  0 +     45454 C
e Alouatta_macconnelli.k141_1277969                           1160  0 -      3959 C
e Alouatta_juara.k141_1687208                                44052  0 -     64179 C
e Alouatta_discolor.k141_2561099                             45595  0 +     55831 C
e Alouatta_caraya.k141_1109140                               46162  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73924  0 -     84148 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       9107 6 +     36723 T-ATCT-T
s Acinonyx_jubatus.LLWD01001279.1                           814469 6 +   1699592 c-attt-t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20417136 6 +  29979442 C-ATTT-T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            217256 6 +    347723 C-ATTT-T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    20036 6 -     61208 T-ATCT-T
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50057 6 +     53615 T-GTCT-T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2084 6 +     13857 T-GTCT-T
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18639 6 -     21945 T-GTCT-T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20324 6 +     32033 T-GTCT-T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587321 6 +   2318259 T-ATCT-T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52398 6 -     68529 T-ATCT-T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25916 6 -     32367 T-ACCT-T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6968 6 -     15198 G-ATCC-T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Avahi_laniger.k141_2756659                                  8147 6 +     11645 T-ATCT-T
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               8155 6 -     19611 T-ATCT-T
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7965088 6 -  23207421 T-ATCT-T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1588 6 -     25979 T-ATCT-T
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88328 6 +    124022 T-ATCT-T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23857 6 +    288883 T-ATCT-T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20358247 6 +  48749331 T-ATCT-T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756811 6 +   1948126 t-atct-t
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546953 6 -  45695690 t-atct-t
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531961 6 -   4408762 T-ATCT-T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632558 6 +  17673402 T-GTCT-T
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666845 6 +   7040546 T-GTCT-T
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210503 6 +   1652518 T-GTCT-T
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506824 6 +  60362399 C-ATTT-T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10460 6 -     23171 C-ATTT-T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223803 6 +   9314153 c-attt-t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616938 6 +  59632846 c-attt-t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108519 6 -  63665305 c-attt-t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27411050 6 -  46296322 T-ATCT-T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26593324 6 +  44709034 T-ATCT-T
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1388 6 -      1607 T-GTCA-C
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272687 6 +    496798 T-ATCT-T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1838 6 +      9923 T-AGCC-T
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29573 6 -     39886 T-GCCC-T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     81155 6 -    217609 T-GTCT-T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 7
s Cavia_aperea.AVPZ01000300.1                              4998256 6 +  23392119 T-GTCT-T
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001698 6 +  23407841 T-GTCT-T
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64777 6 -     66877 T-GTCT-T
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4646 6 -      5494 T-ATCT-T
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493788 6 -  27778364 T-ATCT-T
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20621 6 +     27315 T-ATCT-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143139 6 -   4669795 T-GTCT-T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46878 6 +     47900 T-GTCT-T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2311 6 -     14410 T-GTCT-T
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46693 6 -    148725 T-GTCT-T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28971 6 -     40656 T-GTCT-T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8930 6 +     20796 T-GTCT-T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14044 6 -     17524 T-GTCT-T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29776 6 -     34525 T-GTCT-T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13556 6 -     25376 T-GTCT-T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366143 6 -  39242232 T-GTCT-T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271870 6 +  21565898 T-GTCT-T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34235 6 -     45857 T-GTCT-T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29136 6 -     32606 T-GTCT-T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5299 6 +      8499 T-GTCT-T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27697 6 +     70610 T-GTCT-T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24658 6 +     36323 T-GTCT-T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            14143 6 -     19938 T-ATCT-T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240615 6 -   2543920 T-GTCT-T
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                                345559 6 +  18827391 T-GTCT-T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12098 6 -     44032 T-GTCT-T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306944 6 - 135778131 T-GTCT-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                233 6 -      4087 T-ATCT-T
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             411357 6 -   2368649 T-ATCT-T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381239 6 - 200372422 T-ATCT-T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4796 6 -     84244 T-ATCT-T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808498 6 +  53390261 T-ATCT-T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4534 6 -      8242 T-ATCT-T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 174 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5923 6 +     87169 C-ATTT-T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    647270 6 -   1526836 T-GTCT-C
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20459 6 +     50838 T-GTCT-T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   8978 6 +     36344 T-GTCT-T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29989 6 +     75252 T-GTCT-T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111518 6 -   2246927 T-ATCT-T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294462 6 +  12879189 T-ATCT-C
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633494 6 -  35494412 T-ATCT-T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866825 6 -  20541912 T-ACCC-T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  666060 6 -   1390856 T-ATCT-T
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140860 6 -    198055 T-ATCT-T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100689 6 -    115145 T-GTCT-T
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952419 6 -  37912305 T-GTCT-T
i Dipodomys_ordii.KN672350.1                             I 4 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   7330 6 -     10735 T-GTCT-T
i Dipodomys_stephensi.DipSte_scaffold_89095              I 4 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 11074 6 +     14636 T-GTCT-T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62857027 6 - 111700974 T-TTCT-G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7844 6 +     19438 T-ACGT-T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241678 6 -    607251 t-attt-t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1227248 6 +  10337057 T-CTTT-T
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917672 6 +  41312741 C-ATTT-T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580420 6 +  14770903 C-ATCT-T
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042991 6 -   4378816 t-atct-t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376930 6 +  39960074 T-ATCT-T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412912 6 -    498745 T-ATCT-T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667693 6 +   7059049 T-ATCT-T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265086 6 +  21539334 t-atct-t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72702 6 -    133382 T-ATCT-T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               415 6 +     25849 T-ATCT-T
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16682 6 -     24895 T-ATCT-T
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               44391 6 -     70999 T-ATCT-T
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              88362 6 +    112731 T-ATCT-T
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44925 6 +     68309 T-ATCT-T
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 55249 6 -     65740 T-ATCT-T
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25881 6 -     75513 T-ATCT-T
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 50076 6 -     97555 T-ATCT-T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6800 6 +     30972 T-ATCT-T
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44519 6 -     52037 T-ATCT-T
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60923 6 -    111500 T-ATCT-T
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248379 6 - 206538554 c-attt-t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185118165 6 - 205367284 c-attt-t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 29265 6 -     30238 C-ATTT-T
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2924022 6 -   3816255 T-GTCT-T
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                3311 6 -     28519 T-ATCT-T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93396 6 -     95226 T-ACCT-T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            3201 6 -      6791 C-ATCT-T
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_935316                                 171 6 +     34797 T-ATCT-T
i Gorilla_beringei.k141_935316                           C 0 C 0
s Gorilla_gorilla.LT578341.1                                258267 6 - 186649187 T-ATCT-T
i Gorilla_gorilla.LT578341.1                             I 21 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    4270 6 -     78134 T-ACCT-T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16610 6 -     40692 T-ATCT-T
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             38009 6 +     49394 T-ATCT-T
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62880 6 -     66874 T-ATCT-T
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11751 6 -     42923 T-ATCT-T
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18753 6 -     53142 T-ATCT-T
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32356 6 -    327341 C-ACTT-T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 11061 6 +     48891 T-ATCT-T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934409 6 -  22651954 A-GTCT-T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1765 6 +      8654 T-GTCT-T
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                9203 6 -     36432 T-ATCT-T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 1 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553199 6 -   1711038 T-ATCT-T
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_790761                105 6 +       338 C-ATCT-T
i Hipposideros_galeritus.HipGal_scaffold_790761          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144740 6 -    630532 T-ATCT-T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71717 6 +     83186 C-ATTT-T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73660 6 +    143317 T-GTCT-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 2 C 0
s Hylobates_agilis.k141_1155965                               7771 6 +     12352 T-ATC-NT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14956 6 +     55766 T-ATC-NT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054486 5 + 191637585 T-ATC--T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803364 5 +  11177569 T-ATC--T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9575 6 -    135385 T-GTCT-T
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388756 6 +   7955117 T-ACCT-T
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    4289 6 +     11955 C-ATCT-T
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11597 6 -     16823 T-ATCT-T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73438 6 -     97402 T-ATCT-T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64717 6 -     65777 C-GTCT-T
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14761407 6 +  30322482 T-ATCT-T
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10915 6 +     29618 T-CTCT-T
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10921 6 +     31569 T-CTCT-T
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10921 6 +     24756 T-CTCT-T
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10931 6 +     16388 T-CTCT-T
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        815059 6 -   3914936 C-ATTT-T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     19809 6 +     24238 t-acac-a
i Lepus_americanus.LepAme_scaffold_56121                 I 527 C 0
s Lipotes_vexillifer.KE559953.1                             342782 6 +    662738 T-ATCT-T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336021 6 -   1826925 T-GTCT-T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086428 6 +  43346337 T-ATCT-T
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41616093 6 +  59628241 c-attt-t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              47413 6 -     61512 T-GTCT-T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375075 6 -  60120075 T-GTCT-T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27343 6 +     30207 T-GTCT-T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2181 6 -      5035 T-GTCT-T
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27296 6 +     30527 T-GTCT-T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38472 6 -     50087 T-GTCT-T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48217 6 +     51645 T-GTCT-T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417419 6 - 187317192 T-GTCT-T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401650 6 +  25927173 T-GTCT-T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50821 6 -     62418 T-GTCT-T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3352 6 +     14901 T-GTCT-T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47294 6 +     59329 T-GTCT-T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273201 6 +    668171 T-GTCT-T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1833 6 -      5049 T-GTCT-T
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 4999 6 +     17132 T-GTCT-T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224789 6 -    270270 T-ACGT-T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324489 6 +  24302211 T-GTCT-T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359320 6 -    752769 T-GTCT-T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675108 6 -    737560 t-atct-t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222408 6 +    317179 t-atct-t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502969 6 +  40650429 T-ACCT-T
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       152129 6 +    207569 T-GTCT-T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 183 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27822 6 -     74585 C-ATTT-T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     89066 6 +     93471 T-ATCT-T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48230 6 +    145209 A-GTCA-C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186618 6 +    200668 T-ATCC-T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364764 6 -   8254450 T-AGCT-T
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43684 6 -     48117 T-AGCT-T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24587 6 -     27822 T-GTCT-T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        10070 6 +     27589 C-ATTT-T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   361171 6 +    437263 T-ATCT-T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180847 6 +    366855 T-ATCC-T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27506 6 -     82753 T-ATCT-T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   20086 6 -     63510 C-ACTT-T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42717 6 +     47283 C-ATCT-T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               1267 6 -    124358 T-ACCT-T
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14356686 6 +  14710649 C-ATTT-T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_93829                      4514 6 +     14880 T-GTCA-C
i Myocastor_coypus.MyoCoy_scaffold_93829                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794984 6 +  10118263 C-ATCT-C
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4389159 6 +   6019432 C-ATCC-T
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               385187 6 +   4330536 C-ATCT-T
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3972 6 +     18357 C-ATCT-T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121300 6 +    130748 T-ATCT-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              31364 6 +     34575 T-ATCT-T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233837 6 -   7148211 T-ATCT-T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129456 6 -    149072 T-ACCC-T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55658 6 -    132029 T-ATCT-T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11767 6 -     16345 T-ATCT-T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17652 6 +     22201 T-ATCT-T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415873 6 -  22158432 T-ATCT-T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28050 6 -     54323 T-ATCT-T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199689 6 +   9404916 c-attt-t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11057069 6 -  11899542 T-GTCT-T
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453487 6 +   2017862 C-CTTT-T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         438593 6 -    630418 t-attt-t
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16477 6 +    150152 T-ACCT-T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8104240 6 +  10937097 T-ATct-t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1486 6 +     11607 T-GTCT-T
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107106466 6 - 174332312 t-acac-a
i Oryctolagus_cuniculus.CM000791.1                       I 503 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40735 6 +    559221 c-attt-t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26406188 6 -  44047080 T-ATCT-T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6707 6 +     17875 T-ATCT-T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02004362.1                                 1068 6 +      1339 T-ATCT-T
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             16021 7 -     26668 TAATCT-T
i Pan_troglodytes.NBAG03003091.1                         C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   26088 6 -    230217 C-ATTT-T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463414 6 -  18783137 c-attt-t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3974073 6 +   8748460 c-attt-t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617713 6 +   2937107 T-ATCT-T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   245498 6 - 183742232 T-GTCT-T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11783 6 +     21308 T-GTCT-T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294526 6 -  20919399 T-GTCT-T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24423 6 -     27687 T-GTCT-T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1102 6 +     10553 T-GTCT-T
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1062 6 -     10386 T-GTCT-T
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16669 6 +     78924 C-ATTT-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3788 6 +      9367 T-GTCT-T
i Perognathus_longimembris.PerPac_flattened_line_89005   I 4 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33946 6 -     56120 T-GTCT-T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5765 6 -     63832 T-ATCT-T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            4745 6 +     55023 T-ATCT-T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4267 6 -     89929 T-ATCT-T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4857 6 +     40849 T-ATCT-G
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256587 6 +  14605196 T-ATCT-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5552 6 +     22231 C-ATCT-T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2784 6 +     19503 T-ATCT-T
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Pongo_abelii.CM009266.2                                   181426 6 - 189387572 T-ATCT-T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196166 6 -   9816681 T-ATCT-T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29946 6 +     69807 t-atct-t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47127 6 -     80239 T-ATCT-T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5756 6 +      7663 T-GTCT-T
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984555 6 +   4620579 T-ATCT-T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1568041 6 -   2598838 T-ATCT-T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5679 6 -      7103 T-ATCT-T
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             6276 6 -     11706 T-ATCT-T
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                           10013 6 -     30655 T-ATCT-T
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          36327 6 +     46564 T-ATCT-T
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96606 6 -     98465 T-ATCT-T
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                         10245 6 +     35169 T-ATCT-T
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53755 6 -     66298 T-ATCC-A
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6269 6 -     18639 C-ATTT-T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842396 6 -  28871421 T-ATGT-T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538911 6 -   4952924 T-ATGT-T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100728 6 +  38429054 c-attt-t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29313 6 +     91421 t-atct-t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155865 6 -   7812017 t-atct-t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10170 6 +     72585 t-atct-t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   637 6 -     55207 T-ATCT-T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916351 6 +   3329780 T-GTCT-T
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3775 6 +      7119 T-ATCT-T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124445 6 + 195417433 T-ATCT-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238617 6 -   7961872 t-atct-t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76896 6 -    116970 T-ATGT-T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9870 6 +     16473 T-ATTT-T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    117202 6 +    313613 T-ATCT-T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                           752 6 +     11297 T-ATCT-T
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31145 6 +     58920 T-ATCT-T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17643 6 -     45317 T-ATCT-T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25301 6 -     42441 T-ATCT-T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27977 6 -     29113 T-ATCT-T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31054 6 -     48123 T-ATCT-T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865709 6 -   1910179 T-ATCT-T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672815 6 +  18376816 t-gttt-t
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1870320 6 +   3870691 T-ACCT-T
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8340 6 -     97271 C-ATTT-T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126506 6 +    196729 C-ACTT-T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645556 6 +  69701581 C-ATCT-T
i Sus_scrofa.CM000828.4                                  C 0 I 7
s Symphalangus_syndactylus.tarseq_199                       393138 6 +   1523678 T-ATCT-T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15895 6 +     22964 T-AACT-T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4302 6 +      5583 T-ATCT-T
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      193238 6 +    199430 t-tTCT-T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    107206 6 -    539355 t-tTCT-T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                2575 6 +      9917 T-ATCT-T
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9373 6 +     20590 T-ATCT-T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355307 6 - 186847797 T-GTCT-T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26161 6 -     33621 T-GTCT-T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21237 6 -     31044 T-GTCT-T
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481747 6 -    610378 T-ATCC-T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23055 6 +     26378 T-ATCT-T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35854 6 -     78344 T-ATCT-T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22380 6 +     25722 T-ATCT-T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30810 6 -     62838 T-ATCT-T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30799 6 +     46913 T-ATCT-T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11538 6 -     28527 T-ATCT-T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32745 6 -     64340 T-ATCT-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30783 6 -     63452 T-ATCT-T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12230 6 +     22490 T-ATCT-T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5596 6 -      6147 T-ATCT-T
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12509 6 -     13050 T-ATCT-T
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257673 6 -   6242583 T-ATCT-T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3769 6 +     19340 T-ATCT-T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175486 6 -    200418 T-ATCT-T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6483118 4 -  10818551 T-GTC---
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1837284 6 -   4065304 T-ATTT-T
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      11335 6 -     70247 T-ATTT-T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367365 6 -  33153633 T-ATCT-T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    5165 6 -     21056 T-ATCT-T
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183700 6 +   5085361 C-ATTT-T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  27205 6 -     30710 T-ATCT-T
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              26112 6 -    147434 T-ATCT-T
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77894 6 +   5488506 T-GTCT-T
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106458 6 -    112863 C-ATTT-T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 165
s Xerus_inauris.XerIna_scaffold_2302                        176055 6 -    224448 T-ACCT-T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30699 6 -     86975 C-ATTT-T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1470 6 -      1899 T-ATGT-T
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948229 0 +   3037898 C
e Saimiri_ustus.k141_360372                                  31938 0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16784 0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29383 0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32692 0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       32306 0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110739 0 + 121099817 C
e Callibella_humilis.k141_1233062                            11864 0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607826 0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_147047                  350 0 +     10270 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    51591 0 +     77746 C
e Sapajus_macrocephalus.k141_796559                           9558 0 +     21866 C
e Sapajus_apella.ctg103                                     239968 0 +   5703754 C
e Saguinus_oedipus.k141_1368863                                616 0 +     10417 C
e Saguinus_mystax.k141_6319370                                1276 0 +     10149 C
e Saguinus_midas.LG03                                       394567 0 - 209938924 C
e Saguinus_labiatus.k141_264497                               3661 0 -      7443 C
e Saguinus_inustus.k141_4502137                                856 0 +      4564 C
e Saguinus_imperator.k141_2710097                            15976 0 -     24931 C
e Saguinus_geoffroyi.k141_356064                               373 0 +      9876 C
e Saguinus_bicolor.k141_161125                                8912 0 +     12412 C
e Rattus_norvegicus.chr16                                 37024766 0 -  90668790 C
e Psammomys_obesus.NESX01036366.1                            39866 0 +     52041 C
e Plecturocebus_moloch.k141_1031110                          45651 0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          44184 0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      16258 0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          9331 0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          44283 0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          9332 0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44634 0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       44240 0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4836 0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9754 0 +     39866 C
e Pithecia_vanzolinii.k141_1369553                           33337 0 +     51125 C
e Pithecia_pithecia.tarseq_165                              558323 0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33353 0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33593 0 +     63561 C
e Pithecia_hirsuta.k141_640380                               33317 0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7569 0 -     25401 C
e Pithecia_albicans.k141_1239476                             66481 0 +    207309 C
e Peromyscus_maniculatus.KI615324.1                         249808 0 +  18517816 C
e Onychomys_torridus.OnyTor_scaffold_28377                    6602 0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    96024 0 -    140218 C
e Mus_spretus.CM004101.1                                  39499041 0 + 130317789 C
e Mus_pahari.LT608297.1                                   58218068 0 +  89631738 C
e Mus_musculus.chr8                                       41690122 0 + 129401213 C
e Mus_caroli.LT608237.1                                   35596583 0 + 120012414 C
e Mirza_zaza.k141_766280                                     54523 0 -     62432 C
e Microtus_ochrogaster.CM001695.1                         15965406 0 +  27267610 C
e Microcebus_murinus.CM007674.1                           74986741 0 +  93316391 C
e Mico_schneideri.k141_1877700                                     20782 0 -     26561 C
e Mico_humeralifer.k141_1180625                              12463 0 -     12984 C
e Mico_argentatus.k141_582562                                11963 0 +     17804 C
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52329 0 -    140813 C
e Leontopithecus_rosalia.k141_1583055                         5369 0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      567 0 +      8855 C
e Leontocebus_nigricollis.k141_1320036                         377 0 +      3713 C
e Leontocebus_illigeri.k141_2759473                            734 0 -     14280 C
e Leontocebus_fuscicollis.k141_3470480                         421 0 -     23187 C
e Lagothrix_lagothricha.k141_246028                          44940 0 +    110728 C
e Jaculus_jaculus.JH725527.1                               1241594 0 +   9596543 C
e Ellobius_talpinus.LOJH01026522.1                           15916 0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          33980 0 +    110024 C
e Cricetulus_griseus.LT883664.1                          213118103 0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 46342 0 -     83289 C
e Chiropotes_sagulatus.k141_1113111                           9664 0 +     34062 C
e Chiropotes_israelita.k141_313004                           44113 0 -    112038 C
e Chiropotes_albinasus.k141_1091259                          33016 0 -     52013 C
e Cheracebus_torquatus.k141_890198                           21042 0 +     39636 C
e Cheracebus_regulus.k141_471822                             21253 0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20998 0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10585 0 -     32913 C
e Cheirogaleus_medius.k141_759766                             7053 0 -     15404 C
e Cheirogaleus_major.k141_666340                             32550 0 -     33796 C
e Cebus_unicolor.k141_1654760                                68744 0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9648 0 -     34880 C
e Cebus_albifrons.Contig27                                  374591 0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44838 0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6780 0 -     12580 C
e Callithrix_kuhlii.k119_102356                               3381 0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455859 0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3470 0 -      8861 C
e Callimico_goeldii.k141_1609886                             11377 0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         22212 0 +    119600 C
e Cacajao_hosomi.k141_81245                                  22299 0 +     95584 C
e Cacajao_calvus.k141_89051                                  44773 0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9479 0 +     28062 C
e Ateles_paniscus.k141_866194                                24673 0 -     33135 C
e Ateles_marginatus.k141_970259                              50615 0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              35246 0 +     44353 C
e Ateles_chamek.k141_615173                                   7690 0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12555 0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276389 0 +  21539123 C
e Aotus_vociferans.k141_1514463                               3326 0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3767 0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673773 0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3491 0 -     15923 C
e Aotus_azarae.k141_887050                                    2866 0 +     17741 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178536 2 -    412891 I
e Alouatta_seniculus.k141_928287                             34633 0 +     42133 C
e Alouatta_puruensis.k141_251022                             10499 0 +     30854 C
e Alouatta_palliata.k141_638677                              48326 0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42677 0 +     45454 C
e Alouatta_macconnelli.k141_1277969                           1160 0 -      3959 C
e Alouatta_juara.k141_1687208                                44052 0 -     64179 C
e Alouatta_discolor.k141_2561099                             45595 0 +     55831 C
e Alouatta_caraya.k141_1109140                               46162 0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73924 0 -     84148 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27770 0 +     63021 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       9113 19 +     36723 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
s Acomys_cahirinus.AcoCah_scaffold_21377                     27770  1 +     63021 ------------------------------------------------A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Acinonyx_jubatus.LLWD01001279.1                           814475 15 +   1699592 caaa-t---------------gctt--att---t--gt-----------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                   20417142 19 +  29979442 CAAA-T---------------CCTG--ATA---T--AT------GT-GC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            217262 19 +    347723 CAAA-T---------------GCTG--ATT---T--GT------GT-GC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    20042 19 -     61208 CCAA-T---------------GCTT----AT-GT--GT------GT-GC
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50063 19 +     53615 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2090 19 +     13857 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18645 19 -     21945 TAAA-A---------------GCTTGC--G---T--GT------GT-GC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20330 19 +     32033 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587327 19 +   2318259 CAAA-T---------------GCTT--ATT---C--TT------GT-GC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52404 19 -     68529 CAAA-T---------------GCTT--ATT---C--TT------GT-GG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25922 16 -     32367 TAAA-T---------------GCTC----ATT-T--AT------G----
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 7
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6974 19 -     15198 CAGA-T---------------GCTG--ATT---C--AC------GC-AC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Avahi_laniger.k141_2756659                                  8153 17 +     11645 CAAA-T---------------GCTT----G---T--GC------GA-GT
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               8161 17 -     19611 CAAA-T---------------GCTT----G---T--GC------GA-GT
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7965094 19 -  23207421 CAAA-T---------------GCTT--ATT---T--GT------GT-GC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1594 19 -     25979 CAAA-T---------------GCTT--ATT---T--GT------GT-GC
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88334 19 +    124022 CAAA-T---------------GCTT--ATT---C--TT------GT-GC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23863 19 +    288883 CAAA-T---------------GCTC--ATT---C--TT------GT-GC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20358253 19 +  48749331 CAAA-T---------------GCTC--ATT---C--TT------GT-GC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756817 19 +   1948126 caaa-t---------------gctc--att---c--tt------GT-GC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546959 19 -  45695690 caaa-t---------------gctc--att---c--tt------GT-GC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531967 19 -   4408762 CAAA-T---------------GCTC--ATT---C--TT------GT-GC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632564 19 +  17673402 CAAA-T---------------GCTT--GTT---T--GT------GT-GA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666851 19 +   7040546 CAAA-T---------------GCTT--GTT---T--GT------GT-GA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210509 19 +   1652518 CAAA-T---------------GCTT--GTT---T--GT------GT-GA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506830 19 +  60362399 CAAA-T---------------GCTG--ATT---T--GT------AT-GC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10466 19 -     23171 CAAA-T---------------GCTG--ATT---T--GT------AT-GC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223809 19 +   9314153 caaa-t---------------gctG--ATT---T--GT------AT-GC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616944 19 +  59632846 caaa-t---------------gctG--ATT---T--GT------AT-GC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108525 19 -  63665305 caaa-t---------------gctG--ATT---T--GT------AT-GC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27411056 19 -  46296322 CAAA-T---------------GCTT--ATT---C--TT------GT-GC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26593330 19 +  44709034 CAAA-T---------------GCTT--ATT---C--TT------GT-GC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1394 20 -      1607 CGAA-T---------------GCTT----CTTAT--GT------GT-GC
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272693 19 +    496798 CAAA-T---------------GTTT----A---CCAGT------GT-CC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1844 19 +      9923 CAGA-C---------------GCGG--ATT---C--AT------GC-AC
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29579 19 -     39886 CAAA-T---------------GCTT----AT-GT--GT------GT-GC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     81168  8 -    217609 -----------------------------T---T--GT------GT-GC
i Catagonus_wagneri.CatWag_scaffold_2839                 I 7 C 0
s Cavia_aperea.AVPZ01000300.1                              4998262 19 +  23392119 CAAA-T---------------ACTT----CT-AT--GT------GT-GC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001704 19 +  23407841 CAAA-T---------------ACTT----CT-AT--GT------GT-GC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64783 19 -     66877 CAAA-T---------------ACTT----CT-AT--GT------GT-GC
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4652 19 -      5494 CAAA-T---------------GTTT----A---CCAGT------GT-CC
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493794  9 -  27778364 CAAG-T---------------GCCT------------------------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20627  9 +     27315 CAAG-T---------------GCCT------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143145 19 -   4669795 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46884 19 +     47900 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2317 19 -     14410 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46699 19 -    148725 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28977 19 -     40656 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8936 19 +     20796 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14050 19 -     17524 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29782 19 -     34525 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13562 19 -     25376 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366149 19 -  39242232 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271876 19 +  21565898 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34241 19 -     45857 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29142 19 -     32606 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5305 19 +      8499 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27703 19 +     70610 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24664 19 +     36323 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            14149 18 -     19938 CA-C-T---------------GCTT--ATG---A--GC------GC-TG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             32550 13 -     33796 -----T---------------GTTT----G---T--GT------GT-GT
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             7053 13 -     15404 -----T---------------ATTT----G---T--GT------GT-GT
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240621 19 -   2543920 CAAA-T---------------GCCT----CT-GT--GT------GT-GC
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                                345565 19 +  18827391 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12104 19 -     44032 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306950 19 - 135778131 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  350  7 +     10270 ---------------------------------A--GA------CT-CC
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607826  7 -    839153 ---------------------------------A--GA------CT-CC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                239 14 -      4087 TAAA-T---------------GCTT--ATA---T--G------------
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             411363 19 -   2368649 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381245 19 - 200372422 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4802 19 -     84244 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808504 19 +  53390261 CAAA-T---------------GCTT--ACT---C--GT------AT-GT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4540 19 -      8242 CAGA-T---------------GCTG--ATT---T--CT------GT-TA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46342  1 -     83289 ------------------------------------------------A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213118103  1 - 224834208 ------------------------------------------------A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5929 15 +     87169 CAAA-T---------------GGTG--ATT---T--GT-----------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 2
s Ctenodactylus_gundi.CteGun_scaffold_65                    647276 19 -   1526836 CACA-T---------------GCTT----CT-GT--GT------GT-GC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20465 19 +     50838 CAAA-T---------------GCTT----CT-CC--AT------GG-GC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   8984 19 +     36344 TAAA-T---------------GCTT----CT-AC--CT------GT-GC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            29995 19 +     75252 CAAA-T---------------GCTT----CT-AT--GT------GT-GC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111524 12 -   2246927 CA-A-T---------------GCTT--GCG---A---------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 4
s Daubentonia_madagascariensis.ctg71                        294468 17 +  12879189 CAAA-T---------------GCCT----G---T--GT------GT-GT
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633500 19 -  35494412 CAAA-T---------------GCTT--ATT---T--GT------GT-GC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866831 19 -  20541912 CAAA-C---------------ACTG--ATT---T--GC------GT-GC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  666066  9 -   1390856 CAAA-T---------------GCCT------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140866  9 -    198055 CAAG-T---------------GCCT------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100695 19 -    115145 CAAA-T---------------GCTT----CT-AT--GT------GT-GC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952425 15 -  37912305 CAAA-C---------------ACTT----GTT-T--GT-----------
i Dipodomys_ordii.KN672350.1                             C 0 I 2
s Dipodomys_stephensi.DipSte_scaffold_89095                   7336 15 -     10735 CAAA-C---------------ACTT----GTT-T--GT-----------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 2
s Dolichotis_patagonum.DolPat_scaffold_80628                 11080 19 +     14636 CAAA-T---------------GGTT----CT-AT--GT------GT-GC
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62857033 14 - 111700974 TAAA-T---------------ACAC--TCA---C--C------------
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7850 19 +     19438 CAGA-T---------------GCTG--ATT---T--GT------GT-GT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241684 19 -    607251 caaa-t---------------gctt--aTT---C--TT------GT-GC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33980  1 +    110024 ------------------------------------------------A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15916  1 +     18970 ------------------------------------------------A
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Elephantulus_edwardii.JH947257.1                         1227254  3 +  10337057 TAG----------------------------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 T 63261
s Enhydra_lutris.KZ291758.1                               24917678 19 +  41312741 CAAA-T---------------GCTG--ATT---T--GT------GT-GC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580426 19 +  14770903 CAGA-T---------------GCTG--GTT---T--GT------GT-GC
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3042997 19 -   4378816 caaa-t---------------gctT--ATT---T--GT------GT-GT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376936 19 +  39960074 CAAA-T---------------GCTT--ATT---T--GT------GT-GT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412918 19 -    498745 CAAA-T---------------GCTT--ATT---T--GT------GT-GT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667699 19 +   7059049 CAGA-T---------------GCTT--CCC---T--GT------GT-gt
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265092 19 +  21539334 taaa-g---------------gctTGC--G---T--GT------GT-GC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72708 19 -    133382 CAAA-T---------------GCTT--ATT---T--GT------GT-GC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               421 19 +     25849 CAAA-T---------------GCTT--ATT---T--GT------GT-GC
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16688 17 -     24895 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               44397 17 -     70999 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              88368 17 +    112731 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44931 17 +     68309 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 55255 17 -     65740 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25887 17 -     75513 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 50082 17 -     97555 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6806 17 +     30972 CAAA-T---------------GCTT----A---T--GT------GT-GT
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44525 17 -     52037 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60929 17 -    111500 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248385 15 - 206538554 caaa-t---------------gctt--att---t--gt-----------
i Felis_catus.CM001381.2                                 C 0 I 2
s Felis_catus_fca126.CM031415.1                          185118171 15 - 205367284 caaa-t---------------gctt--att---t--gt-----------
i Felis_catus_fca126.CM031415.1                          C 0 I 2
s Felis_nigripes.FelNig_flattened_line_31944                 29271 15 -     30238 CAAA-T---------------GCTT--ATT---T--GT-----------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 2
s Fukomys_damarensis.KN121974.1                            2924028 19 -   3816255 CGAG-G---------------GCTT----CT-AT--GT------GT-CC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                3317 10 -     28519 CAAA-T---------------ATGT----G-------------------
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 I 6
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93402 19 -     95226 CAAA-T---------------GCTT--ATT---C--TG------GT-GC
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            3207 19 -      6791 CAAT-T---------------GCTT----AT-GT--AT------GT-TC
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_935316                                 177 19 +     34797 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Gorilla_beringei.k141_935316                           C 0 C 0
s Gorilla_gorilla.LT578341.1                                258273 19 - 186649187 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    4276 10 -     78134 CAAA-T---------------GCTT----A-------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 7
s Hapalemur_alaotrensis.k141_330369                          16616 17 -     40692 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             38015 17 +     49394 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62886 17 -     66874 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11757 17 -     42923 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18759 17 -     53142 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32362 15 -    327341 CAAA-T---------------GGTG--ATT---T--GT-----------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 11067 19 +     48891 CAAA-T---------------GCTT--ATT---C--TT------GT-GC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934415 19 -  22651954 CAAG-T---------------GCTT----CT-AT--GT------AT-CC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1771 19 +      8654 CACA-T---------------GCTT--ACA---T--GG------TC-CC
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 I 166
s Hippopotamus_amphibius.HipAmp_scaffold_38803                9209 19 -     36432 CAAT-T---------------GCTT--ATT---T--GT------GT-GC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553205 19 -   1711038 CATA-T---------------CCTG--ATT---T--GT------GT-GT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_790761                111 19 +       338 CATA-T---------------CCTG--ATT---T--GT------GT-GT
i Hipposideros_galeritus.HipGal_scaffold_790761          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144746 19 -    630532 TAAA-A---------------GCTTGC--G---T--GT------GT-GT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71723 15 +     83186 CAGA-T---------------GCTT--ATT---T--GT-----------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 2
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73666 19 +    143317 CAAA-T---------------ACTT----CT-AT--GT------GT-GC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7777 19 +     12352 TAAA-G---------------GCTTGC--G---T--GT------GT-GT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14962 19 +     55766 TAAA-G---------------GCTTGC--G---T--GT------GT-GT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054491 19 + 191637585 TAAA-G---------------GCTTGC--G---T--GT------GT-GT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803369 19 +  11177569 TAAA-G---------------GCTTGC--G---T--GT------GT-GT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9581 19 -    135385 CAAA-T---------------CCTT----CT-GT--GT------GT-GC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388762 19 +   7955117 TCAG-T---------------GCCC----ATT-T--AT------GT-GC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    4295 17 +     11955 CAAA-T---------------GCTT----G---T--GT------GA-GT
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11603 19 -     16823 CAAA-T---------------GCTT--ATT---T--GT------GT-GC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241594 19 +   9596543 CCAA-T---------------GCTT----CT-GT--GT------GT-GC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73444 19 -     97402 CAAA-T---------------GCTT--ATT---T--GT------GT-GC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64723 19 -     65777 CAGA-T---------------GCTG--ATT---T--GG------GT-GC
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 C 0
s Lemur_catta.scaffold_24                                 14761413 17 +  30322482 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10921 17 +     29618 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10927 17 +     31569 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10927 17 +     24756 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10937 17 +     16388 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        815065 19 -   3914936 AAGA-T---------------GCTG--ATT---T--GT------GT-GC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     19815 24 +     24238 cAAA-TAATACTATATAATACTATC------------------------
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 7
s Lipotes_vexillifer.KE559953.1                             342788 19 +    662738 CAAA-T---------------GCTT--ATT---T--GT------GT-GC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336027 19 -   1826925 TAAA-G---------------ACTTGC--G---T--GT------GT-GC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086434 19 +  43346337 TAAA-T---------------GCTT--ACA---T--GG------TC-CC
i Loxodonta_africana.GL010049.1                          C 0 I 165
s Lycaon_pictus.CM007581.1                                41616099 19 +  59628241 caaa-t---------------gctN--NNN---N--NN------NN-NN
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              47419 19 -     61512 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375081 19 -  60120075 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27349 19 +     30207 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2187 19 -      5035 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27302 19 +     30527 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38478 19 -     50087 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48223 19 +     51645 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417425 19 - 187317192 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401656 19 +  25927173 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50827 19 -     62418 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3358 19 +     14901 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47300 19 +     59329 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273207 19 +    668171 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1839 19 -      5049 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5005 19 +     17132 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224795 19 -    270270 CAGA-T---------------GCTG--ATT---T--GT------GT-GT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324495 19 +  24302211 TAAA-G---------------GCTTAC--G---T--GT------GT-GC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359326 19 -    752769 TAAA-G---------------GCTTGC--A---T--GT------GT-GC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675114 19 -    737560 caaa-t---------------acct--atc---T--GT------GA-GC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222414 19 +    317179 caaa-t---------------acct--atc---T--GT------GA-GC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502975 19 +  40650429 TCAG-T---------------GCTC----AT-GT--AT------GT-AC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       152135 19 +    207569 CAGA-T---------------ACTG--TTT---T--GT------GT-GC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27828 19 -     74585 CAAA-T---------------GCTG--ATT---T--GT------GT-GC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52329  1 -    140813 ------------------------------------------------A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     89072 19 +     93471 CAAA-T---------------GCTT--ATT---T--GT------GT-GC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986741 13 +  93316391 -----t---------------gttt----g---t--gt------gt-gt
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48236 14 +    145209 TAAA-T---------------ACTT--CCA---C--C------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186624 19 +    200668 CTGA-C---------------ACTG--ACT---C--GT------GT-GC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965406  1 +  27267610 ------------------------------------------------A
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364770 19 -   8254450 CAGA-T---------------GTTG--ATT---T--TT------GT-GT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_23309             43690 19 -     48117 CAGA-T---------------GTTG--ATT---T--TT------GT-GT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24593 19 -     27822 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        10076 19 +     27589 CAGA-T---------------GCTG--ATT---T--GT------GT-GC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     54523 13 -     62432 -----T---------------GTTT----G---T--GT------GT-GT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   361177 19 +    437263 CAAA-T---------------GCTT--ATT---T--GT------GT-GC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180853 19 +    366855 CAGA-G---------------GCTG--ATG---T--GT------GC-GC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27512 19 -     82753 CAAA-T---------------GCTT--TTT---C--TC------GT-GT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   20092 15 -     63510 GAAA-T---------------GGTG--ATT---T--GT-----------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 2
s Murina_feae.MurFea_scaffold_17764                          42723 19 +     47283 TAGT-T---------------GCTG--ATT---T--GT------GT-GC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596583  1 + 120012414 ------------------------------------------------A
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41690122  1 + 129401213 ------------------------------------------------A
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58218068  1 +  89631738 ------------------------------------------------A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39499041  1 + 130317789 ------------------------------------------------A
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               1273 19 -    124358 TAAA-T---------------GCTT----ATT-T--AT------GT-TC
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14356692 19 +  14710649 CAAA-T---------------GCTG--ATT---T--GT------GT-GC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_93829                      4520 19 +     14880 CAAA-T---------------GCTT----CT-AT--GT------GT-GC
i Myocastor_coypus.MyoCoy_scaffold_93829                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9794990 19 +  10118263 CAGA-T---------------GCTG--ATT---T--GT------GT-GC
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4389165 19 +   6019432 CAGA-T---------------GCTG--ATC---T--GT------GT-GC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               385193 19 +   4330536 CAGA-T---------------GCTG--ATC---T--GT------GT-GC
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3978 19 +     18357 CAGA-T---------------GCTG--ATT---T--GT------GT-GC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121306 18 +    130748 CA-AGT---------------GCTT--CCC---A--G-------GT-CC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nasalis_larvatus.k141_1350636                              31370 21 +     34575 TAAA-G---------------GCTTGT--G---TGTGT------GT-GC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233843 19 -   7148211 CAAA-T---------------GCTT--ATT---T--GT------GT-GC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129462 18 -    149072 CAGG-T---------------ACTG---CC---C--AT------GT-GC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55664 19 -    132029 TAAA-G---------------GCTTGC--G---T--GT------GT-GT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11773 19 -     16345 TAAA-G---------------GCTTGC--G---T--GT------GT-GT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17658 19 +     22201 TAAA-G---------------GCTTGC--G---T--GT------GT-GT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415879 19 -  22158432 TAAA-G---------------GCTTGC--G---T--GT------GT-GT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28056 19 -     54323 TAAA-G---------------GCTTGC--G---T--GT------GT-GT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199695 19 +   9404916 gaaa-t---------------gctg--ATT---T--GT------AT-GC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11057075 19 -  11899542 CAAA-T---------------GCTT----CT-GT--GT------GT-GC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453493 19 +   2017862 CAAA-T---------------GCTG--ATT---T--GT------GT-GC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         438599 19 -    630418 caaa-t---------------gctt--aTT---C--TT------GT-GC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16483 19 +    150152 CAAA-T---------------GCTT--ATT---C--TG------GT-GC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    96024  1 -    140218 ------------------------------------------------A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6602  1 -     41509 ------------------------------------------------A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8104246 19 +  10937097 caaa-t---------------gctt--att---t--tt------tt-gc
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1492 14 +     11607 TAAA-T---------------GCTT--ACA---C--A------------
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107106472 24 - 174332312 caaa-taatactatataatactatc------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 7
s Otocyon_megalotis.JAEUCK010005147.1                        40741 19 +    559221 caaa-t---------------gctg--ATT---T--GT------AT-GC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26406194 19 -  44047080 CAAA-T---------------GCTT--ATT---C--TT------GT-GC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6713 19 +     17875 CAAA-T---------------GCTT--ATT---C--TT------GT-GC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02004362.1                                 1074 19 +      1339 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             16028 20 -     26668 TAAA-G---------------GCTTGT--G---T--GT------GTGGC
i Pan_troglodytes.NBAG03003091.1                         C 0 I 113
s Panthera_onca.PanOnc_flattened_line_3271                   26094 15 -    230217 CAAA-T---------------GCTT--ATT---T--GT-----------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 2
s Panthera_pardus.KV860321.1                              18463420 15 -  18783137 caaa-t---------------gctt--att---t--gt-----------
i Panthera_pardus.KV860321.1                             C 0 I 2
s Panthera_tigris.KE722367.1                               3974079 15 +   8748460 caaa-t---------------gctt--att---t--gt-----------
i Panthera_tigris.KE722367.1                             C 0 I 2
s Pantholops_hodgsonii.KE114653.1                          1617719 19 +   2937107 CAAA-T---------------GCTT--ATT---C--TT------GT-GC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   245504 19 - 183742232 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11789 19 +     21308 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294532 19 -  20919399 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24429 19 -     27687 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1108 19 +     10553 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1068 19 -     10386 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16675 14 +     78924 CA-A-T---------------GCTT--AGT---T--GT-----------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 2
s Perognathus_longimembris.PerPac_flattened_line_89005        3794 25 +      9367 CCAG-A---------------ACTT----AT-AT--ATATATATAT-AT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249808  1 +  18517816 ------------------------------------------------A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33952 19 -     56120 AAGA-C---------------ATTT----CT-AT--GT------GT-TC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5771 19 -     63832 CAAA-T---------------GCTT--ATT---T--GT------GT-GC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            4751 19 +     55023 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4273 19 -     89929 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4863 19 +     40849 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256593 19 +  14605196 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5558 19 +     22231 CAGA-T---------------GCTG--ATT---T--GT------GT-GC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2790 19 +     19503 CAAA-T---------------GCTT--ATT---T--GT------GT-GC
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Pongo_abelii.CM009266.2                                   181432 19 - 189387572 TAAA-G---------------GCTTGT--A---T--GT------GT-GC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196172 19 -   9816681 TAAA-G---------------GCTTGT--A---T--GT------GT-GC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29952 19 +     69807 taaa-g---------------gctTGT--G---T--GT------GT-GC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47133 19 -     80239 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5762 19 +      7663 CACA-T---------------GCTT--ACA---T--GG------TC-CC
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 166
s Prolemur_simus.MPIZ01000396.1                            1984561 17 +   4620579 CAAA-T---------------GCTT----A---T--GT------GT-GT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1568047 17 -   2598838 CAAA-T---------------GCTT----A---T--GT------GA-GT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5685 17 -      7103 CAAA-T---------------GCTT----G---T--GT------GA-GT
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             6282 17 -     11706 CAAA-T---------------GCTT----G---T--GT------GA-GT
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                           10019 17 -     30655 CAAA-T---------------GCTT----G---T--GT------GA-GT
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          36333 17 +     46564 CAAA-T---------------TCTT----G---T--GT------GA-GT
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96612 17 -     98465 CAAA-T---------------GCTT----G---T--GT------GA-GT
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                         10251 17 +     35169 CAAA-T---------------GCTT----A---T--GT------GA-GT
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39866  1 +     52041 ------------------------------------------------A
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53761 19 -     66298 CACA-T---------------ACTG--ATT---T--GT------GT-GC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6275 20 -     18639 CAAA-T---------------GCTG--ATT---TC-AA------GT-GC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842402 19 -  28871421 CAGA-T---------------GCTG--ATT---T--GT------GT-GT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538917 19 -   4952924 CAGA-T---------------GCTG--ATT---T--GT------GT-GT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100734 15 +  38429054 caaa-t---------------gctt--att---t--gt-----------
i Puma_concolor.QAVW01001104.1                           C 0 I 2
s Pygathrix_cinerea.k141_1153803                             29319 19 +     91421 taaa-g---------------gctTGT--G---T--GT------GT-GC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155871 19 -   7812017 taaa-g---------------gctTGT--G---T--GT------GT-GC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10176 19 +     72585 taaa-g---------------gctTGT--G---T--GT------GT-GC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   643 19 -     55207 CAAA-T---------------GCTT--ATT---C--TT------GT-GC
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37024766  1 -  90668790 ------------------------------------------------A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916357 19 +   3329780 CAGA-T---------------GCTG--ATT---T--GT------GT-GT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3781 19 +      7119 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124451 19 + 195417433 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238623 19 -   7961872 taaa-g---------------gctTGT--G---T--GT------GT-GC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76902 19 -    116970 CAGA-T---------------GCTG--ATT---T--GT------GT-GT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9876 19 +     16473 CAAA-T---------------GCTT--ATT---C--TT------GT-GC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    117208 18 +    313613 CA-G-T---------------GTTT--ATT---T--TT------AT-GT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                           758 19 +     11297 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31151 19 +     58920 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17649 19 -     45317 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25307 19 -     42441 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     27983 19 -     29113 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31060 19 -     48123 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51591  1 +     77746 ------------------------------------------------A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865715 19 -   1910179 CAAG-T---------------GCTT--ATC---T--GT------TT-GC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4672821 18 +  18376816 caaa-T---------------G-----ATC---T--GT-T-T--TT-TC
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1870326 19 +   3870691 TCAG-T---------------GCCC----AT-GT--AT------GT-GC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8346 13 -     97271 CAAA-T---------------GCTG--ATT---T---------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 2
s Suricata_suricatta.SurSur_flattened_line_6629             126512 15 +    196729 CAAA-T---------------GGTG--ATT---T--GT-----------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 2
s Sus_scrofa.CM000828.4                                    6645569  8 +  69701581 -----------------------------T---T--GT------GT-GC
i Sus_scrofa.CM000828.4                                  I 7 C 0
s Symphalangus_syndactylus.tarseq_199                       393144 19 +   1523678 TAAA-G---------------GCTTGC--G---T--GT------GT-GT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15901  4 +     22964 CAGA---------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4308 19 +      5583 CA-AGT---------------GCTT--CCC---A--G------GGT-CC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      193244 19 +    199430 CAGA-T---------------GCTT--ATT---T--GT------GT-GC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    107212 19 -    539355 CAGA-T---------------GCTT--ATT---T--GT------GT-GC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                2581 18 +      9917 CAAA-T---------------GTT-----A---CCAGT------GT-CC
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9379 19 +     20590 CAAA-T---------------GTTT----A---CCAGT------GT-CC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355313 19 - 186847797 TAAA-G---------------GCTTGC--G---T--GT------GT-GC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26167 19 -     33621 CAGA-C---------------GTTT----CT-GT--GT------GT-CC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21243 18 -     31044 CA-G-T---------------GCTT--ACA---A--GG------GA-CA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481753 19 -    610378 CAGA-C---------------GCTG--ATT---C--GT------GC-AC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23061 19 +     26378 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35860 19 -     78344 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22386 19 +     25722 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30816 19 -     62838 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30805 19 +     46913 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11544 19 -     28527 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32751 19 -     64340 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30789 19 -     63452 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12236 19 +     22490 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5602 19 -      6147 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12515 19 -     13050 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257679 19 -   6242583 TAAA-G---------------GCTTGT--G---T--GT------GT-GC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3775 15 +     19340 TAAA-G---------------GCTTGT--G---T--GT-----------
i Trachypithecus_pileatus.k141_2622778                   C 0 I 2
s Tragulus_javanicus.TraJav_scaffold_3462                   175492 19 -    200418 CAAA-T---------------GCTT--ATT---T--AT------GT-GC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6483122 12 -  10818551 -----------------------TT--ACG---T--TG------Gc-cc
i Trichechus_manatus.JH594705.1                          C 0 I 165
s Tupaia_chinensis.KB320699.1                              1837290 19 -   4065304 ACAA-C---------------GCTT----CT-CT--GT------GT-GG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      11341 19 -     70247 ACAA-C---------------GCTT----CT-CA--GT------GT-GA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367371 19 -  33153633 CAAA-T---------------GCTT--ATT---T--GT------GT-GC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    5171 19 -     21056 CAAA-A---------------GCTT--ATT---T--GT------GT-GT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183706 19 +   5085361 CAGA-T---------------GCTG--ATA---T--AT------GT-GC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  27211 17 -     30710 CAAA-T---------------GCTT----G---T--GT------GT-GT
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              26118 17 -    147434 CAAA-T---------------GCTT----T---T--GT------GT-GT
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77900 19 +   5488506 CAAA-T---------------GCTT--GTT---T--GT------GT-GA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106629 19 -    112863 caaa-t---------------gcTG--ATT---T--GT------AT-GC
i Vulpes_lagopus.VulLag_flattened_line_12041             I 165 C 0
s Xerus_inauris.XerIna_scaffold_2302                        176061 19 -    224448 TCAA-T---------------GCTT----AT-GT--TT------GT-GC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30705 19 -     86975 CAAA-T---------------GCTG--ATT---T--GT------GT-GC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1476 19 -      1899 CCAA-T---------------ACTT----AT-GT--AT------GT-CC
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Nannospalax_galili.KL204047.1                             948229  0 +   3037898 C
e Saimiri_ustus.k141_360372                                  31938  0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16784  0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29383  0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32692  0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       32306  0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110739  0 + 121099817 C
e Callibella_humilis.k141_1233062                            11864  0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Sapajus_macrocephalus.k141_796559                           9558  0 +     21866 C
e Sapajus_apella.ctg103                                     239968  0 +   5703754 C
e Saguinus_oedipus.k141_1368863                                616  0 +     10417 C
e Saguinus_mystax.k141_6319370                                1276  0 +     10149 C
e Saguinus_midas.LG03                                       394567  0 - 209938924 C
e Saguinus_labiatus.k141_264497                               3661  0 -      7443 C
e Saguinus_inustus.k141_4502137                                856  0 +      4564 C
e Saguinus_imperator.k141_2710097                            15976  0 -     24931 C
e Saguinus_geoffroyi.k141_356064                               373  0 +      9876 C
e Saguinus_bicolor.k141_161125                                8912  0 +     12412 C
e Plecturocebus_moloch.k141_1031110                          45651  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          44184  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      16258  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          9331  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          44283  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          9332  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44634  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       44240  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4836  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9754  0 +     39866 C
e Pithecia_vanzolinii.k141_1369553                           33337  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              558323  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33353  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33593  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               33317  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7569  0 -     25401 C
e Pithecia_albicans.k141_1239476                             66481  0 +    207309 C
e Mico_schneideri.k141_1877700                                     20782  0 -     26561 C
e Mico_humeralifer.k141_1180625                              12463  0 -     12984 C
e Mico_argentatus.k141_582562                                11963  0 +     17804 C
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Leontopithecus_rosalia.k141_1583055                         5369  0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      567  0 +      8855 C
e Leontocebus_nigricollis.k141_1320036                         377  0 +      3713 C
e Leontocebus_illigeri.k141_2759473                            734  0 -     14280 C
e Leontocebus_fuscicollis.k141_3470480                         421  0 -     23187 C
e Lagothrix_lagothricha.k141_246028                          44940  0 +    110728 C
e Chiropotes_sagulatus.k141_1113111                           9664  0 +     34062 C
e Chiropotes_israelita.k141_313004                           44113  0 -    112038 C
e Chiropotes_albinasus.k141_1091259                          33016  0 -     52013 C
e Cheracebus_torquatus.k141_890198                           21042  0 +     39636 C
e Cheracebus_regulus.k141_471822                             21253  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20998  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10585  0 -     32913 C
e Cebus_unicolor.k141_1654760                                68744  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9648  0 -     34880 C
e Cebus_albifrons.Contig27                                  374591  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44838  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6780  0 -     12580 C
e Callithrix_kuhlii.k119_102356                               3381  0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455859  0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3470  0 -      8861 C
e Callimico_goeldii.k141_1609886                             11377  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         22212  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  22299  0 +     95584 C
e Cacajao_calvus.k141_89051                                  44773  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9479  0 +     28062 C
e Ateles_paniscus.k141_866194                                24673  0 -     33135 C
e Ateles_marginatus.k141_970259                              50615  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              35246  0 +     44353 C
e Ateles_chamek.k141_615173                                   7690  0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12555  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276389  0 +  21539123 C
e Aotus_vociferans.k141_1514463                               3326  0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3767  0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673773  0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3491  0 -     15923 C
e Aotus_azarae.k141_887050                                    2866  0 +     17741 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Alouatta_seniculus.k141_928287                             34633  0 +     42133 C
e Alouatta_puruensis.k141_251022                             10499  0 +     30854 C
e Alouatta_palliata.k141_638677                              48326  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42677  0 +     45454 C
e Alouatta_macconnelli.k141_1277969                           1160  0 -      3959 C
e Alouatta_juara.k141_1687208                                44052  0 -     64179 C
e Alouatta_discolor.k141_2561099                             45595  0 +     55831 C
e Alouatta_caraya.k141_1109140                               46162  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73924  0 -     84148 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       9132 3 +     36723 CCA
s Acinonyx_jubatus.LLWD01001279.1                           814492 3 +   1699592 CTA
i Acinonyx_jubatus.LLWD01001279.1                        I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27771 3 +     63021 CCA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20417161 3 +  29979442 CTC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            217281 3 +    347723 CTT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    20061 3 -     61208 CTG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50082 3 +     53615 CCA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2109 3 +     13857 CCA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18664 3 -     21945 CCA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20349 3 +     32033 CCA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587346 3 +   2318259 CTG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52423 3 -     68529 CTG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6993 3 -     15198 CTA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Avahi_laniger.k141_2756659                                  8170 3 +     11645 CTG
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               8178 3 -     19611 CTG
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7965113 3 -  23207421 CTC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1613 3 -     25979 CTC
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88353 3 +    124022 CTG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23882 3 +    288883 CTG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20358272 3 +  48749331 CTG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756836 3 +   1948126 CTG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546978 3 -  45695690 CTG
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531986 3 -   4408762 CTG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632583 3 +  17673402 CTG
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666870 3 +   7040546 CTG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210528 3 +   1652518 CTG
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506849 3 +  60362399 CTC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10485 3 -     23171 CTC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223828 3 +   9314153 CTC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616963 3 +  59632846 CTC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108544 3 -  63665305 CTC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27411075 3 -  46296322 CTG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26593349 3 +  44709034 CTG
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1414 3 -      1607 CTC
i Capromys_pilorides.CapPil_scaffold_762519              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           272712 3 +    496798 CCA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1863 3 +      9923 CTA
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29598 3 -     39886 CTG
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     81176 3 -    217609 CTT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4998281 3 +  23392119 CTC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001723 3 +  23407841 CTT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64802 3 -     66877 CTT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4671 3 -      5494 CCA
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                143164 3 -   4669795 CCA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46903 3 +     47900 CCA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2336 3 -     14410 CCA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46718 3 -    148725 CCA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28996 3 -     40656 CCA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8955 3 +     20796 CCA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14069 3 -     17524 CCA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29801 3 -     34525 CCA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13581 3 -     25376 CCA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366168 3 -  39242232 CCA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271895 3 +  21565898 CCA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34260 3 -     45857 CCA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29161 3 -     32606 CCA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5324 3 +      8499 CCA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27722 3 +     70610 CCA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24683 3 +     36323 CCA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            14167 3 -     19938 CGC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             32563 3 -     33796 CTG
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             7066 3 -     15404 CTG
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240640 3 -   2543920 CTC
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chlorocebus_aethiops.ctg25                                345584 3 +  18827391 CCA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12123 3 -     44032 CCA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306969 3 - 135778131 CCA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  357 3 +     10270 CTC
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607833 3 -    839153 CTC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411382 3 -   2368649 CCA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381264 3 - 200372422 CCA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4821 3 -     84244 CCA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808523 3 +  53390261 CTT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4559 3 -      8242 CTA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46343 3 -     83289 CTA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213118104 3 - 224834208 CTA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5946 3 +     87169 CTA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    647295 3 -   1526836 CTA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20484 3 +     50838 CTC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   9003 3 +     36344 CTT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            30014 3 +     75252 CTT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111540 3 -   2246927 CTC
i Dasypus_novemcinctus.JH564415.1                        I 4 C 0
s Daubentonia_madagascariensis.ctg71                        294485 3 +  12879189 CTA
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633519 3 -  35494412 CTC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866850 3 -  20541912 CTC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100714 3 -    115145 CTC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952442 3 -  37912305 CTA
i Dipodomys_ordii.KN672350.1                             I 2 I 4
s Dipodomys_stephensi.DipSte_scaffold_89095                   7353 3 -     10735 CTA
i Dipodomys_stephensi.DipSte_scaffold_89095              I 2 I 4
s Dolichotis_patagonum.DolPat_scaffold_80628                 11099 3 +     14636 CTT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7869 3 +     19438 CTA
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241703 3 -    607251 CTG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33981 3 +    110024 CTA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           15917 3 +     18970 CTA
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24917697 3 +  41312741 CTC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580445 3 +  14770903 CTA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3043016 3 -   4378816 CTG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376955 3 +  39960074 CTG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412937 3 -    498745 CTG
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3667718 3 +   7059049 ctg
i Erinaceus_europaeus.JH835339.1                         C 0 I 286
s Erythrocebus_patas.Contig38                               265111 3 +  21539334 CCA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72727 3 -    133382 CTC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               440 3 +     25849 CTC
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16705 3 -     24895 CTG
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               44414 3 -     70999 CTG
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              88385 3 +    112731 CTG
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44948 3 +     68309 CTG
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 55272 3 -     65740 CTG
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25904 3 -     75513 CTG
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 50099 3 -     97555 CTG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6823 3 +     30972 CTG
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44542 3 -     52037 CTG
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60946 1 -    111500 C--
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248402 3 - 206538554 CTA
i Felis_catus.CM001381.2                                 I 2 C 0
s Felis_catus_fca126.CM031415.1                          185118188 3 - 205367284 CTA
i Felis_catus_fca126.CM031415.1                          I 2 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 29288 3 -     30238 CTA
i Felis_nigripes.FelNig_flattened_line_31944             I 2 C 0
s Fukomys_damarensis.KN121974.1                            2924047 3 -   3816255 CTC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                3333 3 -     28519 CTA
i Galeopterus_variegatus.GalVar_scaffold_51812           I 6 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93421 3 -     95226 CTG
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            3226 3 -      6791 CTA
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_935316                                 196 3 +     34797 CCA
i Gorilla_beringei.k141_935316                           C 0 C 0
s Gorilla_gorilla.LT578341.1                                258292 3 - 186649187 CCA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    4293 3 -     78134 CTA
i Graphiurus_murinus.GraMur_scaffold_10447               I 7 C 0
s Hapalemur_alaotrensis.k141_330369                          16633 3 -     40692 CTG
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             38032 3 +     49394 CTG
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62903 3 -     66874 CTG
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11774 3 -     42923 CTG
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18776 3 -     53142 CTG
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32379 3 -    327341 CTA
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 11086 3 +     48891 CTG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934434 3 -  22651954 CTC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1956 1 +      8654 c--
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 166 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                9228 3 -     36432 CTA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553224 3 -   1711038 CTC
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_790761                130 3 +       338 CTC
i Hipposideros_galeritus.HipGal_scaffold_790761          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144765 3 -    630532 CCA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71740 3 +     83186 ATT
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 2 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73685 3 +    143317 CTT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7796 3 +     12352 CCA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14981 3 +     55766 CCA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054510 3 + 191637585 CCA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803388 3 +  11177569 CCA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9600 3 -    135385 CTT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388781 3 +   7955117 CTA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    4312 3 +     11955 CTG
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11622 3 -     16823 CTC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241613 3 +   9596543 CTG
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73463 3 -     97402 CTC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64742 3 -     65777 CTA
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 36
s Lemur_catta.scaffold_24                                 14761430 3 +  30322482 CTG
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10938 3 +     29618 CTG
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10944 3 +     31569 CTG
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10944 3 +     24756 CTG
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10954 3 +     16388 CTG
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        815084 3 -   3914936 CTC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     19846 3 +     24238 CTA
i Lepus_americanus.LepAme_scaffold_56121                 I 7 C 0
s Lipotes_vexillifer.KE559953.1                             342807 3 +    662738 CTT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336046 3 -   1826925 CCA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086618 1 +  43346337 C--
i Loxodonta_africana.GL010049.1                          I 165 C 0
s Lycaon_pictus.CM007581.1                                41616118 3 +  59628241 NNN
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              47438 3 -     61512 CCA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375100 3 -  60120075 CCA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27368 3 +     30207 CCA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2206 3 -      5035 CCA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27321 3 +     30527 CCA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38497 3 -     50087 CCA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48242 3 +     51645 CCA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417444 3 - 187317192 CCA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401675 3 +  25927173 CCA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50846 3 -     62418 CCA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3377 3 +     14901 CCA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47319 3 +     59329 CCA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273226 3 +    668171 CCA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1858 3 -      5049 CCA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5024 3 +     17132 CCA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224814 3 -    270270 CTA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324514 3 +  24302211 CCA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359345 3 -    752769 CCA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675133 3 -    737560 CTA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222433 3 +    317179 CTA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502994 3 +  40650429 CTA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       152154 3 +    207569 CTA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27847 3 -     74585 CTC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52330 3 -    140813 CTA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     89091 3 +     93471 CTC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986754 3 +  93316391 ctg
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186643 3 +    200668 CTA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965407 3 +  27267610 CTA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43709 3 -     48117 CTA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24612 3 -     27822 CCA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        10095 3 +     27589 CTC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     54536 3 -     62432 CTT
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   361196 3 +    437263 CTC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180872 3 +    366855 CTC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27531 3 -     82753 CTG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   20109 3 -     63510 CTA
i Mungos_mungo.MunMun_flattened_line_18455               I 2 C 0
s Murina_feae.MurFea_scaffold_17764                          42742 3 +     47283 CGA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596584 3 + 120012414 CTA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41690123 3 + 129401213 CTA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58218069 3 +  89631738 CTA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39499042 3 + 130317789 CTA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               1292 3 -    124358 CCA
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14356711 3 +  14710649 CTC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_93829                      4539 3 +     14880 CTC
i Myocastor_coypus.MyoCoy_scaffold_93829                 C 0 I 22
s Myotis_brandtii.KE162005.1                               9795009 3 +  10118263 CGA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4389184 3 +   6019432 CGA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               385212 3 +   4330536 CGA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         3997 3 +     18357 CGA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121324 3 +    130748 CTC
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             948229 2 +   3037898 -TG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              31391 3 +     34575 CCA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233862 3 -   7148211 CTC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129480 3 -    149072 CTG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55683 3 -    132029 CCA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11792 3 -     16345 CCA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17677 3 +     22201 CCA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415898 3 -  22158432 CCA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28075 3 -     54323 CCA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199714 3 +   9404916 CTC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11057094 3 -  11899542 CTC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1453512 3 +   2017862 CAC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         438618 3 -    630418 CTG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16502 3 +    150152 CTG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    96025 3 -    140218 CTA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6603 3 -     41509 CTA
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8104265 3 +  10937097 CTC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107106503 3 - 174332312 CTA
i Oryctolagus_cuniculus.CM000791.1                       I 7 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40760 3 +    559221 TTC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26406213 3 -  44047080 CTG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6732 3 +     17875 CTG
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02004362.1                                 1093 3 +      1339 CCA
i Pan_paniscus.AJFE02004362.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1476262 3 - 189151597 CCA
i Pan_troglodytes.CM009242.2                             I 67 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   26111 3 -    230217 CTA
i Panthera_onca.PanOnc_flattened_line_3271               I 2 C 0
s Panthera_pardus.KV860321.1                              18463437 3 -  18783137 CTA
i Panthera_pardus.KV860321.1                             I 2 C 0
s Panthera_tigris.KE722367.1                               3974096 3 +   8748460 CTG
i Panthera_tigris.KE722367.1                             I 2 C 0
s Pantholops_hodgsonii.KE114653.1                          1617738 3 +   2937107 CTG
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   245523 3 - 183742232 CCA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11808 3 +     21308 CCA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294551 3 -  20919399 CCA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24448 3 -     27687 CCA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1127 3 +     10553 CCA
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1087 3 -     10386 CCA
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16691 3 +     78924 CTA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3819 3 +      9367 CTA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249809 3 +  18517816 CTA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     33971 3 -     56120 CTC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5790 3 -     63832 CTC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            4770 3 +     55023 CCA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4292 3 -     89929 CCA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4882 3 +     40849 CCA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256612 3 +  14605196 CCA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5577 3 +     22231 CTG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2809 3 +     19503 CTC
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Pongo_abelii.CM009266.2                                   181451 3 - 189387572 CCA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196191 3 -   9816681 CCA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29971 3 +     69807 CCA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47152 3 -     80239 CCA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5947 1 +      7663 c--
i Procavia_capensis.ProCapCap_scaffold_165387            I 166 C 0
s Prolemur_simus.MPIZ01000396.1                            1984578 3 +   4620579 CTG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1568064 3 -   2598838 CTG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5702 3 -      7103 CTG
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             6299 3 -     11706 CTG
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                           10036 3 -     30655 CTG
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          36350 3 +     46564 CTG
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96629 3 -     98465 CTG
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                         10268 3 +     35169 CTG
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39867 3 +     52041 CTA
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            53780 3 -     66298 CTA
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6295 3 -     18639 CTC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842421 3 -  28871421 CTA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538936 3 -   4952924 CTA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100751 3 +  38429054 CTA
i Puma_concolor.QAVW01001104.1                           I 2 C 0
s Pygathrix_cinerea.k141_1153803                             29338 3 +     91421 CCA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155890 3 -   7812017 CCA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10195 3 +     72585 CCA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   662 3 -     55207 CTG
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37024767 3 -  90668790 CTA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916376 3 +   3329780 CTC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3800 3 +      7119 CCA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124470 3 + 195417433 CCA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238642 3 -   7961872 CCA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76921 3 -    116970 CTA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9895 3 +     16473 CTG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    117226 3 +    313613 CTA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                           777 3 +     11297 CCA
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31170 3 +     58920 CCA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17668 3 -     45317 CCA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25326 3 -     42441 CCA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28002 3 -     29113 CCA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31079 3 -     48123 CCA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51592 3 +     77746 CTA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865734 3 -   1910179 CTA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 6
s Sorex_araneus.JH798187.1                                 4672839 3 +  18376816 CTA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1870345 3 +   3870691 CTA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8361 3 -     97271 CTT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 2 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126529 3 +    196729 CTA
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                    6645577 3 +  69701581 CTA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393163 3 +   1523678 CCA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4327 3 +      5583 CTC
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      193263 3 +    199430 CTA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    107231 3 -    539355 CTA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                2599 3 +      9917 CCA
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9398 3 +     20590 CTA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355332 3 - 186847797 CCA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26186 3 -     33621 CTC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21261 3 -     31044 CTC
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481772 3 -    610378 CTG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23080 3 +     26378 CCA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35879 3 -     78344 CCA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22405 3 +     25722 CCA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30835 3 -     62838 CCA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30824 3 +     46913 CCA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11563 3 -     28527 CCA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32770 3 -     64340 CCA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30808 3 -     63452 CCA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12255 3 +     22490 CCA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5621 3 -      6147 CCG
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12534 3 -     13050 CCA
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257698 3 -   6242583 CCA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3792 3 +     19340 CCA
i Trachypithecus_pileatus.k141_2622778                   I 2 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175511 3 -    200418 CTG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6483299 1 -  10818551 c--
i Trichechus_manatus.JH594705.1                          I 165 C 0
s Tupaia_chinensis.KB320699.1                              1837309 3 -   4065304 CTA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      11360 3 -     70247 CTA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367390 3 -  33153633 CTC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    5190 3 -     21056 CTA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183725 3 +   5085361 CTC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  27228 3 -     30710 CTG
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              26135 3 -    147434 CTG
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77919 3 +   5488506 CTG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106648 3 -    112863 CTC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        176080 3 -    224448 CTA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30724 3 -     86975 CAC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1495 3 -      1899 CTG
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Saimiri_ustus.k141_360372                                  31938 0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16784 0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29383 0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32692 0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       32306 0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110739 0 + 121099817 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                253 0 -      4087 C
e Microgale_talazaci.MicTal_scaffold_6613                    48250 0 +    145209 C
e Echinops_telfairi.JH980293.1                            62857047 0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_201229               1506 0 +     11607 C
e Elephantulus_edwardii.JH947257.1                         1227257 63261 +  10337057 T
e Callibella_humilis.k141_1233062                            11864 0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                15905 0 +     22964 C
e Sapajus_macrocephalus.k141_796559                           9558 0 +     21866 C
e Sapajus_apella.ctg103                                     239968 0 +   5703754 C
e Saguinus_oedipus.k141_1368863                                616 0 +     10417 C
e Saguinus_mystax.k141_6319370                                1276 0 +     10149 C
e Saguinus_midas.LG03                                       394567 0 - 209938924 C
e Saguinus_labiatus.k141_264497                               3661 0 -      7443 C
e Saguinus_inustus.k141_4502137                                856 0 +      4564 C
e Saguinus_imperator.k141_2710097                            15976 0 -     24931 C
e Saguinus_geoffroyi.k141_356064                               373 0 +      9876 C
e Saguinus_bicolor.k141_161125                                8912 0 +     12412 C
e Plecturocebus_moloch.k141_1031110                          45651 0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          44184 0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      16258 0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          9331 0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          44283 0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          9332 0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44634 0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       44240 0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4836 0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9754 0 +     39866 C
e Pithecia_vanzolinii.k141_1369553                           33337 0 +     51125 C
e Pithecia_pithecia.tarseq_165                              558323 0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33353 0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33593 0 +     63561 C
e Pithecia_hirsuta.k141_640380                               33317 0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7569 0 -     25401 C
e Pithecia_albicans.k141_1239476                             66481 0 +    207309 C
e Miniopterus_natalensis.LDJU01000034.1                    6364789 1 -   8254450 I
e Mico_schneideri.k141_1877700                                     20782 0 -     26561 C
e Mico_humeralifer.k141_1180625                              12463 0 -     12984 C
e Mico_argentatus.k141_582562                                11963 0 +     17804 C
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Leontopithecus_rosalia.k141_1583055                         5369 0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      567 0 +      8855 C
e Leontocebus_nigricollis.k141_1320036                         377 0 +      3713 C
e Leontocebus_illigeri.k141_2759473                            734 0 -     14280 C
e Leontocebus_fuscicollis.k141_3470480                         421 0 -     23187 C
e Lagothrix_lagothricha.k141_246028                          44940 0 +    110728 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  140875 0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  666075 0 -   1390856 C
e Chiropotes_sagulatus.k141_1113111                           9664 0 +     34062 C
e Chiropotes_israelita.k141_313004                           44113 0 -    112038 C
e Chiropotes_albinasus.k141_1091259                          33016 0 -     52013 C
e Cheracebus_torquatus.k141_890198                           21042 0 +     39636 C
e Cheracebus_regulus.k141_471822                             21253 0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20998 0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10585 0 -     32913 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20636 0 +     27315 C
e Cebus_unicolor.k141_1654760                                68744 0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9648 0 -     34880 C
e Cebus_albifrons.Contig27                                  374591 0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44838 0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6780 0 -     12580 C
e Callithrix_kuhlii.k119_102356                               3381 0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455859 0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3470 0 -      8861 C
e Callimico_goeldii.k141_1609886                             11377 0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         22212 0 +    119600 C
e Cacajao_hosomi.k141_81245                                  22299 0 +     95584 C
e Cacajao_calvus.k141_89051                                  44773 0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9479 0 +     28062 C
e Ateles_paniscus.k141_866194                                24673 0 -     33135 C
e Ateles_marginatus.k141_970259                              50615 0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              35246 0 +     44353 C
e Ateles_chamek.k141_615173                                   7690 0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12555 0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276389 0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      25938 7 -     32367 I
e Aotus_vociferans.k141_1514463                               3326 0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3767 0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673773 0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3491 0 -     15923 C
e Aotus_azarae.k141_887050                                    2866 0 +     17741 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178536 2 -    412891 I
e Alouatta_seniculus.k141_928287                             34633 0 +     42133 C
e Alouatta_puruensis.k141_251022                             10499 0 +     30854 C
e Alouatta_palliata.k141_638677                              48326 0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42677 0 +     45454 C
e Alouatta_macconnelli.k141_1277969                           1160 0 -      3959 C
e Alouatta_juara.k141_1687208                                44052 0 -     64179 C
e Alouatta_discolor.k141_2561099                             45595 0 +     55831 C
e Alouatta_caraya.k141_1109140                               46162 0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73924 0 -     84148 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       9135 50 +     36723 T-CTATtt----------------tggt-ga-ggttgttaccaaaacaccatgggtttggtctaagtcc
s Acinonyx_jubatus.LLWD01001279.1                           814495 17 +   1699592 CCTTACTG----------------GGGT-GA-GGT----------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27774 11 +     63021 TCCAACTT----------------TGG------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 29
s Ailuropoda_melanoleuca.LNAT01000098.1                   20417164 17 +  29979442 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            217284 17 +    347723 TCCTATTT----------------TGGT-GA-GGT----------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    20064 16 -     61208 TCTTACTT----------------TGTG--A-CAT----------------------------------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50085 50 +     53615 TCCTA-TT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2112 50 +     13857 TCCTATTT----------------TGAT-GA-GGCtgtcaccaaaacactatgg-tttggtctgagtcc
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18667 50 -     21945 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgg-tttggtctgagtcc
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20352 50 +     32033 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgg-tttggtctgagtcc
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587349 17 +   2318259 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52426 17 -     68529 TCCTACTT----------------TGGT-GG-GGT----------------------------------
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  6996 17 -     15198 TCCTATTT----------------TGGT-GA-GAT----------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Avahi_laniger.k141_2756659                                  8173 17 +     11645 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Avahi_laniger.k141_2756659                             C 0 C 0
s Avahi_peyrierasi.k141_1823318                               8181 17 -     19611 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Avahi_peyrierasi.k141_1823318                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7965116 17 -  23207421 TCCTACTT----------------TGGT-GA-GGA----------------------------------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1616 17 -     25979 TCCTACTT----------------TGGT-GA-GGA----------------------------------
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88356 17 +    124022 TCCTGCTT----------------TGGT-GA-GGT----------------------------------
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     23885 17 +    288883 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20358275 17 +  48749331 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      756839 17 +   1948126 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27546981 17 -  45695690 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1531989 17 -   4408762 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632586 17 +  17673402 TCCTACTT----------------TGGT-GA-CGT----------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4666873 17 +   7040546 TCCTACTT----------------TGGT-GA-CGT----------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1210531 17 +   1652518 TCCTAATT----------------TGGT-GA-CGT----------------------------------
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42506852 17 +  60362399 TCCTACTT----------------TGGT-GA-GAT----------------------------------
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10488 17 -     23171 TCCTACTT----------------TGGT-GA-GAT----------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223831 17 +   9314153 TCCTACTT----------------TGGT-GA-GAT----------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41616966 17 +  59632846 TCCTACTT----------------TGGT-GA-GAT----------------------------------
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108547 17 -  63665305 TCCTACTT----------------TGGT-GA-GAT----------------------------------
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27411078 17 -  46296322 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26593352 17 +  44709034 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_762519                   1417  8 -      1607 TTCTACTT-------------------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_762519              C 0 I 14
s Carlito_syrichta.NW_007259797.1                           272715 17 +    496798 TTCTACTT----------------TGAT-GA-GGT----------------------------------
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1866 17 +      9923 TCCTACTT----------------TGGA-GA-GAT----------------------------------
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29601 17 -     39886 TCCTACTT----------------TGGT-GA-AGT----------------------------------
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     81179 17 -    217609 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4998284 16 +  23392119 TCCTAGT------------------TGGGGA-GAA----------------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5001726 16 +  23407841 TCCTAGT------------------TGGGGA-GAA----------------------------------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64805 16 -     66877 TCCTAGT------------------TGGGGA-GAA----------------------------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4674 17 -      5494 TTCTACTT----------------TGAT-GA-GGT----------------------------------
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493803 13 -  27778364 ----ATTT----------------TGGT-GA-GGT----------------------------------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20636 13 +     27315 ----ATTT----------------TGGT-GA-GGT----------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143167 51 -   4669795 TCCTATTT----------------TGGT-GA-GGCTGTCACCAAAACACTATGGGTTTGGTCTAAGTCc
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       46906 51 +     47900 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2339 51 -     14410 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctaagtcc
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          46721 51 -    148725 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctaagtcc
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        28999 51 -     40656 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           8958 51 +     20796 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14072 51 -     17524 TCCTATTT----------------TGGC-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          29804 51 -     34525 TCCTATTT----------------TGGC-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13584 51 -     25376 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366171 51 -  39242232 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  271898 51 +  21565898 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34263 51 -     45857 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29164 51 -     32606 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5327 51 +      8499 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           27725 51 +     70610 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24686 51 +     36323 TCCTATTT----------------CGAT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            14170 17 -     19938 TCCTGCTT----------------CGGT-GA-GCT----------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheirogaleus_major.k141_666340                             32566 17 -     33796 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Cheirogaleus_major.k141_666340                         C 0 C 0
s Cheirogaleus_medius.k141_759766                             7069 17 -     15404 TCCTGTTT----------------GGGT-GA-GGT----------------------------------
i Cheirogaleus_medius.k141_759766                        C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240643  8 -   2543920 TCCTACTT-------------------------------------------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 14
s Chlorocebus_aethiops.ctg25                                345587 50 +  18827391 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactat-ggtttggtctgagtcc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12126 50 -     44032 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactat-ggtttggtctgagtcc
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            306972 51 - 135778131 TCCTATTT----------------TGGT-GA-GTCTGTCACCAAAACACTATGGGTTTGGTCTGAgtcc
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  360 17 +     10270 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            607836 17 -    839153 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                253  2 -      4087 ---------------------------------GT----------------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             411385 51 -   2368649 CCCTGTTT----------------TGGT-GA-GGCTGTTACCAAAACACTGTGGGTTTGGTCTAAGTCc
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381267 51 - 200372422 CCCTGTTT----------------TGGT-GA-GGCtgttaccaaaacactgtgggtttggtctaagtcc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               4824 51 -     84244 CCCTGTTT----------------TGGT-GA-GGCtgttaccaaaacactgtgggtttggtctaagtcc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808526 17 +  53390261 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4562 17 -      8242 TCCTACTC----------------CAGT-GA-GGT----------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46346  9 -     83289 TCCTATTT----------------T--------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 7
s Cricetulus_griseus.LT883664.1                          213118107 11 - 224834208 TTCTACTT----------------TGG------------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 19
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5949 17 +     87169 TTCTACTG----------------GGGT-GA-GGT----------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    647298 17 -   1526836 TCCTACTT----------------TGGC-GA-GGT----------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20487  8 +     50838 TCGTACTC-------------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 14
s Cuniculus_paca.CunPac_flattened_line_7025                   9006 16 +     36344 TCCTAGTT-----------------TGA-GA-GGA----------------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            30017 15 +     75252 TCCTAGT------------------TGG-GA-GGA----------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2111543 17 -   2246927 TTCTCCTT----------------TGGT-GG-GTT----------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294488 17 +  12879189 TTTCATTT----------------TGGT-GT-GGT----------------------------------
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18633522 17 -  35494412 TCCTACTT----------------TGGT-GA-GCA----------------------------------
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11866853 17 -  20541912 TCCTACTT----------------TGGT-GA-GAT----------------------------------
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  666075 13 -   1390856 ----GTTT----------------TGGT-GA-GGT----------------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140875 13 -    198055 ----ATTT----------------TGGT-GA-GGT----------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18952449  7 -  37912305 --------------------------GT-GA-GAA----------------------------------
i Dipodomys_ordii.KN672350.1                             I 4 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   7360  7 -     10735 --------------------------GT-GA-GAA----------------------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 4 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100717  8 -    115145 TCCTACTT-------------------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 14
s Dolichotis_patagonum.DolPat_scaffold_80628                 11102 16 +     14636 TCCTAGT------------------TGGGGA-GGA----------------------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62857047  2 - 111700974 ---------------------------------GT----------------------------------
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               7872 17 +     19438 TCCTACTT----------------TAGT-GA-GGT----------------------------------
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241706 17 -    607251 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          33984 11 +    110024 TCCTTCTT----------------TGG------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 18
s Ellobius_talpinus.LOJH01026522.1                           15920 11 +     18970 TCCTTCTT----------------TGG------------------------------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 18
s Enhydra_lutris.KZ291758.1                               24917700 17 +  41312741 TCCTACTG----------------TGGT-GA-GAT----------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580448 16 +  14770903 TCCTACT-----------------GGGC-GC-AGT----------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3043019 17 -   4378816 TCCTATTT----------------TGGT-GA-GGT----------------------------------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21376958 17 +  39960074 TCCTATTT----------------TGGT-GA-GGT----------------------------------
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              412940 17 -    498745 TCCTATTT----------------TGGT-GA-GGT----------------------------------
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3668007 17 +   7059049 TCCTTCTT----------------TGTT-GA-GGT----------------------------------
i Erinaceus_europaeus.JH835339.1                         I 286 C 0
s Erythrocebus_patas.Contig38                               265114 51 +  21539334 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72730 17 -    133382 TCCTACTT----------------TGGT-GA-GGA----------------------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               443 17 +     25849 TCCTACTT----------------TGGT-GA-GGA----------------------------------
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_51491                               16708 17 -     24895 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Eulemur_albifrons.k141_51491                           C 0 C 0
s Eulemur_collaris.k141_601111                               44417 17 -     70999 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                              88388 17 +    112731 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                             44951 17 +     68309 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_636316                                 55275 17 -     65740 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Eulemur_fulvus.k141_636316                             C 0 C 0
s Eulemur_macaco.k141_1562045                                25907 17 -     75513 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 50102 17 -     97555 TTCTATTT----------------GGGT-GA-GGT----------------------------------
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            6826 17 +     30972 TTCTATTT----------------GGGT-GA-GGT----------------------------------
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_514691                                  44545 17 -     52037 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Eulemur_rufus.k141_514691                              C 0 C 0
s Eulemur_sanfordi.k141_1122526                              60947  6 -    111500 ---------------------------T-GA-GGT----------------------------------
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                 186248405 17 - 206538554 TCTTACTG----------------GGGT-GA-GGT----------------------------------
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185118191 17 - 205367284 TCTTACTG----------------GGGT-GA-GGT----------------------------------
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 29291 17 -     30238 TCTTACTG----------------GGGT-GA-GGT----------------------------------
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2924050 16 -   3816255 TCCTTCTT-----------------TGG-GA-GGA----------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                3336 17 -     28519 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93424 17 -     95226 GCCTACTT----------------TGGT-GA-GGT----------------------------------
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            3229 17 -      6791 TCCTACGT----------------TGGT-GA-GGT----------------------------------
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_935316                                 199 50 +     34797 T-CTATTT----------------TGGT-GA-GGTtgttaccaaaacaccatgggtttggtctaggtcc
i Gorilla_beringei.k141_935316                           C 0 I 4
s Gorilla_gorilla.LT578341.1                                258295 50 - 186649187 T-CTATTT----------------TGGT-GA-GGTtgttaccaaaacaccatgggtttggtctaggtcc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    4296 17 -     78134 TCCGACTT----------------TGGA-GA-GGT----------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16636 17 -     40692 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_646465                             38035 17 +     49394 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Hapalemur_gilberti.k141_646465                         C 0 C 0
s Hapalemur_griseus.k141_763500                              62906 17 -     66874 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Hapalemur_griseus.k141_763500                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         11777 17 -     42923 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         18779 17 -     53142 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32382 17 -    327341 TCCTACTG----------------GGAT-GA-GGT----------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 11089 17 +     48891 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1934437 16 -  22651954 TCCTTCTT-----------------TGG-GA-GGA----------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1957 28 +      8654 -----caCTGCACCGTGGGCCCTCTTCT-GT-GGG----------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                9231 17 -     36432 TCCTACTT----------------TGGT-GA-GGA----------------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553227 17 -   1711038 TCCTACAT----------------TGAT-GA-GGT----------------------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_790761                133 17 +       338 TCCTACAT----------------TGGT-GA-GGT----------------------------------
i Hipposideros_galeritus.HipGal_scaffold_790761          C 0 C 0
s Hoolock_leuconedys.ctg274                                    144768 51 -    630532 TCCTATTT----------------TGGT-GA-GGTtgttaccaaaacaccatgggtgtggtctaagtcc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71743 16 +     83186 TCCTACTG-----------------GGT-GA-GGT----------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73688 16 +    143317 TCCTAGT------------------TGGGGA-GAA----------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               7799 51 +     12352 TCCTATTT----------------TGGT-GA-GGTtgttaccaaaacaccatgggtgtggtctaagtcc
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              14984 51 +     55766 TCCTATTT----------------TGGT-GA-GGTtgttaccaaaacaccatgggtgtggtctaagtcc
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054513 51 + 191637585 TCCTATTT----------------TGGT-GA-GGTtgttaccaaaacaccatgggtgtggtctaagtcc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803391 51 +  11177569 TCCTATTT----------------TGGT-GA-GGTtgttaccaaaacaccatgggtgtggtctaagtcc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9603 16 -    135385 TCCTACTT-----------------TGG-CA-GAA----------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388784 17 +   7955117 TCATACTC----------------TGAT-GA-GGT----------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_2415743                                    4315 17 +     11955 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Indri_indri.k141_2415743                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11625 17 -     16823 TCCTACTT----------------TGGT-GA-GCA----------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1241616 16 +   9596543 TCTTACTC----------------TGTG--A-CAT----------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73466 17 -     97402 TCCTACTT----------------TGGT-GA-GGA----------------------------------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    34002 17 -     49555 TCTTACTT----------------GGGT-GC-TGT----------------------------------
i Lasiurus_borealis.LasBor_scaffold_26245                I 49 C 0
s Lemur_catta.scaffold_24                                 14761433 17 +  30322482 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_567626                         10941 17 +     29618 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Lepilemur_ankaranensis.k141_567626                     C 0 C 0
s Lepilemur_dorsalis.k141_387009                             10947 17 +     31569 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_330196                         10947 17 +     24756 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Lepilemur_ruficaudatus.k141_330196                     C 0 C 0
s Lepilemur_septentrionalis.k141_360456                      10957 17 +     16388 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Lepilemur_septentrionalis.k141_360456                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        815087 17 -   3914936 TCCTACTT----------------TGGT-GA-AGT----------------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     19849 17 +     24238 TACTACTT----------------TGGT-GA-AGT----------------------------------
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             342810 17 +    662738 TCCTACTT----------------TGGT-GA-GCA----------------------------------
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336049 51 -   1826925 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctaagtcc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086619 11 +  43346337 -----TGC----------------TTAC--T-GGT----------------------------------
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41616121 17 +  59628241 NNNNNNNN----------------NNNN-NN-NAT----------------------------------
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              47441 51 -     61512 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctaagtcc
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375103 51 -  60120075 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctaagtcc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27371 51 +     30207 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctaagtcc
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2209 51 -      5035 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctaagtcc
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27324 51 +     30527 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctaagtcc
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38500 51 -     50087 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48245 51 +     51645 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417447 51 - 187317192 TCCTATTT----------------TGGT-GA-GGCTGTCACCAAAACACTATGGGTTTGGTCTAAGTCc
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401678 51 +  25927173 TCCTATTT----------------TGGT-GA-GGCTGTCACCAAAACACTATGGGTTTGGTCTAAgtcc
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  50849 51 -     62418 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3380 51 +     14901 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctaagtcc
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47322 51 +     59329 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273229 51 +    668171 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  1861 51 -      5049 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctaagtcc
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5027 51 +     17132 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224817 17 -    270270 TCCTACTT----------------TAGT-GA-GGT----------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324517 51 +  24302211 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359348 51 -    752769 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675136 17 -    737560 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             222436 17 +    317179 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7502997 17 +  40650429 TCATACTC----------------TGAT-GA-GGT----------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       152157 17 +    207569 TCCTACTT----------------TGGC-AA-GGT----------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27850 17 -     74585 TCCTACTT----------------TGGT-GA-GAT----------------------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52333 11 -    140813 TTCTCCTT----------------TGG------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 19
s Mesoplodon_bidens.MesBid_scaffold_6114                     89094 17 +     93471 TTCTACTT----------------TGGT-GA-GGA----------------------------------
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Microcebus_murinus.CM007674.1                           74986757 17 +  93316391 tcctACTT----------------GGGC-GA-GGT----------------------------------
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48250  2 +    145209 ---------------------------------AT----------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186646 17 +    200668 TCCTACTT----------------TGGT-GA-GAT----------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15965410 11 +  27267610 TCCTTCTT----------------TGG------------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 18
s Miniopterus_natalensis.LDJU01000034.1                    6364790 15 -   8254450 --CTACTT----------------TGGC-AA-GGT----------------------------------
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43712 17 -     48117 TCCTACTT----------------TGGC-AA-GGT----------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24615 51 -     27822 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctgagtcc
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        10098 17 +     27589 TCCTACTT----------------TGGT-GA-AGT----------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Mirza_zaza.k141_766280                                     54539 17 -     62432 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Mirza_zaza.k141_766280                                 C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   361199 17 +    437263 TCCTACTT----------------TGGT-GA-GCA----------------------------------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180875 17 +    366855 TCCTACTT----------------TGGC-GA-AAC----------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27534 17 -     82753 TCCTGCTT----------------TGGT-GA-GGT----------------------------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   20112 17 -     63510 TCCTACTG----------------GGAT-GA-GGT----------------------------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42745 17 +     47283 TCCTACTT----------------TGAT-GA-AGT----------------------------------
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35596587 11 + 120012414 TCCTACTT----------------TAG------------------------------------------
i Mus_caroli.LT608237.1                                  C 0 I 19
s Mus_musculus.chr8                                       41690126 11 + 129401213 TCCTACTT----------------TAG------------------------------------------
i Mus_musculus.chr8                                      C 0 I 19
s Mus_pahari.LT608297.1                                   58218072 11 +  89631738 TTCTACTT----------------TAG------------------------------------------
i Mus_pahari.LT608297.1                                  C 0 I 19
s Mus_spretus.CM004101.1                                  39499045 11 + 130317789 TCCTACTT----------------TAG------------------------------------------
i Mus_spretus.CM004101.1                                 C 0 I 19
s Muscardinus_avellanarius.MusAve_scaffold_5560               1295 27 -    124358 TCCTACTTTG----TTG--TATTTTGGT-GA-GGT----------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14356714 17 +  14710649 TCCTACTT----------------TGGT-GA-GAT----------------------------------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     65000  8 +     67721 TCCTACTT-------------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 70 I 2086
s Myotis_brandtii.KE162005.1                               9795012 17 +  10118263 TCCTACTT----------------TGGCG-A-AGT----------------------------------
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4389187 16 +   6019432 TCCTACTT----------------TGGC--A-GGT----------------------------------
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               385215 16 +   4330536 TCCTACTT----------------TGGC--A-AGT----------------------------------
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         4000 16 +     18357 TCCTACTT----------------TGGC--A-AGT----------------------------------
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121327 17 +    130748 GCCTACTT----------------TGGT-GA-GAT----------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 C 0
s Nannospalax_galili.KL204047.1                             948231 10 +   3037898 TCCTA-TT----------------TGG------------------------------------------
i Nannospalax_galili.KL204047.1                          C 0 I 19
s Nasalis_larvatus.k141_1350636                              31394 51 +     34575 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233865 17 -   7148211 TCCTACTT----------------TGGT-GA-GCA----------------------------------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129483 17 -    149072 TTCTACTT----------------TGAT-GA-GGT----------------------------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           55686 51 -    132029 TCCTATTT----------------TGGT-GA-GGTtgttaccgaagcaccatgggtgtggtctaagtcc
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11795 51 -     16345 TCCTATTT----------------TGGT-GA-GGTtgttaccgaaacaccatgggtgtggtctaagtcc
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17680 51 +     22201 TCCTATTT----------------TGGT-GA-GGTtgttaccgaaacaccatgggtgtggtctaagtcc
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415901 51 -  22158432 TCCTATTT----------------TGGT-GA-GGTtgttaccgaaacaccatgggtgtggtctaagtcc
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28078 51 -     54323 TCCTATTT----------------TGGT-GA-GGTtgttaccgaaacaccatgggtgtggtctaagtcc
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199717 17 +   9404916 TCCTACTT----------------TGGT-GA-GAT----------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11057097  8 -  11899542 TGctactt-------------------------------------------------------------
i Octodon_degus.JH651603.1                               C 0 I 14
s Odobenus_rosmarus.KB229312.1                             1453515 17 +   2017862 TCCTACTT----------------TGGT-GA-AGT----------------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         438621 17 -    630418 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          16505 17 +    150152 GCCTACTT----------------TGGT-GA-GGT----------------------------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    96028 11 -    140218 TCCTTCTT----------------TGG------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 18
s Onychomys_torridus.OnyTor_scaffold_28377                    6606 11 -     41509 TTCTACTT----------------TGG------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 19
s Orcinus_orca.KB316932.1                                  8104268 17 +  10937097 TCCTACTT----------------TGGT-GA-GCA----------------------------------
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1506  2 +     11607 ---------------------------------GT----------------------------------
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107106506 17 - 174332312 CACTACTT----------------TGGT-GA-AGT----------------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40763 17 +    559221 TCCTACTT----------------TGGT-GA-GAT----------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26406216 17 -  44047080 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                       6735 17 +     17875 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02004362.1                                 1096 50 +      1339 T-CTATTT----------------TGGT-GA-TGTtgttaccaaaacaccatgggtttggtctaggtcc
i Pan_paniscus.AJFE02004362.1                            C 0 I 61
s Pan_troglodytes.CM009242.2                               1476265 51 - 189151597 TCCTATTT----------------TGGT-GA-GGTTGTTACCAAAACACCATAGGTTTGGTCTAAGTCC
i Pan_troglodytes.CM009242.2                             C 0 I 4
s Panthera_onca.PanOnc_flattened_line_3271                   26114 17 -    230217 TCCTACTG----------------GGGT-GA-GGT----------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463440 17 -  18783137 TCCTACTG----------------GGGT-GA-GGT----------------------------------
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3974099 17 +   8748460 TCCTACTG----------------GGGT-GA-GGT----------------------------------
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1617741 17 +   2937107 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   245526 51 - 183742232 TCCTATTT----------------TGGT-GA-GGCTGTCACCAAAACACTATGGGTTTGGTCTAAGTCc
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            11811 51 +     21308 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctaagtcc
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294554 51 -  20919399 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctaagtcc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24451 51 -     27687 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctaagtcc
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1130 51 +     10553 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctaagtcc
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1090 51 -     10386 TCCTATTT----------------TGGT-GA-GGCtgtcaccaaaacactatgggtttggtctaagtcc
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16694 17 +     78924 TCCTCCTG----------------GGGT-GA-GGT----------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3822 16 +      9367 TTCTATT-----------------TCAT-GA-GAT----------------------------------
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         249812 11 +  18517816 TCTTACTT----------------TGG------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 19
s Petromus_typicus.PetTyp_scaffold_17301                     33974 16 -     56120 TCCTACTC-----------------TGG-GA-GGA----------------------------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5793 17 -     63832 TCCTACTT----------------TGGT-GA-GCA----------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            4773 51 +     55023 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4295 51 -     89929 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            4885 51 +     40849 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactgtgggtttggtctaagtcc
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256615 51 +  14605196 TCCTATTT----------------TGGT-GA-GGCTGTTACCAAAACACTATGGGTTTGGTCTAAGTCC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5580 17 +     22231 TCCTACTT----------------GGGC-GC-AGT----------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2812 17 +     19503 TCCTACTC----------------TGGT-GA-GGA----------------------------------
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Pongo_abelii.CM009266.2                                   181454 51 - 189387572 TCCTATTT----------------TGGT-GA-GGTTGTTACCGAAACACCATGGGTTTGGTCTAAGTCC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196194 51 -   9816681 TCCTATTT----------------TGGT-GA-GGTtgttaccgaaacaccatgggtttggtctaagtcc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              29974 51 +     69807 TCCTATTT----------------TGAT-GA-GGCtgttaccaaaacactgtgggtttggtctaagtcc
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47155 51 -     80239 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactgtgggtttggtctaagtcc
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5948 28 +      7663 -----caCTGCACCGTGGGCCCTCTTCT-GT-GGG----------------------------------
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984581 17 +   4620579 TCCTATTT----------------GGGT-GA-GAT----------------------------------
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1568067 17 -   2598838 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_209299                           5705 17 -      7103 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Propithecus_coronatus.k141_209299                      C 0 C 0
s Propithecus_diadema.k141_153680                             6302 17 -     11706 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Propithecus_diadema.k141_153680                        C 0 C 0
s Propithecus_edwardsi.k141_635656                           10039 17 -     30655 TCCTATTT----------------GGCT-GA-GGT----------------------------------
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_1496898                          36353 17 +     46564 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Propithecus_perrieri.k141_1496898                      C 0 C 0
s Propithecus_tattersalli.k141_1127767                       96632 17 -     98465 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Propithecus_tattersalli.k141_1127767                   C 0 C 0
s Propithecus_verreauxi.k141_1047036                         10271 17 +     35169 TCCTATTT----------------GGGT-GA-GGT----------------------------------
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036366.1                            39870 11 +     52041 TTCTCCTT----------------TGG------------------------------------------
i Psammomys_obesus.NESX01036366.1                        C 0 I 19
s Pteronotus_parnellii.KE847780.1                            53783 17 -     66298 TCCTACTT----------------TGAT-GA-GAT----------------------------------
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6298 17 -     18639 TCCTACTT----------------TGGT-GA-GAT----------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842424 17 -  28871421 TCTTACTT----------------TAGT-GA-GGT----------------------------------
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3538939 17 -   4952924 TCTTACTT----------------TAGT-GA-GGT----------------------------------
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18100754 17 +  38429054 TCTTACTG----------------GGGT-GA-GGT----------------------------------
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29341 51 +     91421 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  155893 51 -   7812017 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10198 51 +     72585 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   665 17 -     55207 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37024770 11 -  90668790 TCCTACTT----------------TAG------------------------------------------
i Rattus_norvegicus.chr16                                C 0 I 19
s Rhinolophus_sinicus.LVEH01000134.1                       2916379 17 +   3329780 TCCTACTT----------------TGGT-GA-AGT----------------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             3803 51 +      7119 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtgtaagtcc
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124473 51 + 195417433 TCCTATTT----------------TGGT-GA-GGCTGTTACCAAAACACTATGGGTTTGGTGTAAGTCc
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238645 51 -   7961872 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtgtaagtcc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76924 17 -    116970 TCCTACTT----------------TAGT-GA-GGT----------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9898 17 +     16473 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    117229 17 +    313613 TCCTACTT----------------TGGT-GA-GGT----------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                           780 51 +     11297 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31173 51 +     58920 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17671 51 -     45317 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25329 51 -     42441 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28005 51 -     29113 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31082 51 -     48123 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51595 11 +     77746 TTCTACTT----------------TGG------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 19
s Solenodon_paradoxus.SolPar_flattened_line_126            1865743  7 -   1910179 --------------------------TT-GA-GAT----------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          I 6 C 0
s Sorex_araneus.JH798187.1                                 4672842 17 +  18376816 CCCAATTT----------------TGGT-GA-TAA----------------------------------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1870348 17 +   3870691 TCATACTC----------------TGAT-GA-GGT----------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8364 17 -     97271 TCCTAGTT----------------TGGT-GA-GGT----------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126532 17 +    196729 TCCTACTG----------------GGAT-GA-GGT----------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645580 17 +  69701581 TCCTACTC----------------TGGG-GA-GGT----------------------------------
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393166 51 +   1523678 TCCTATTT----------------TGGT-GA-GGTtgttaccaaaacaccgttggtgtggtctaagtcc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15905 17 +     22964 TCCTACTT----------------TGGC-CA-GGT----------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4330 17 +      5583 TCCTACTT----------------TGGT-GA-GAT----------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      193266 17 +    199430 CCCTATTT----------------CAGT-GA-CAT----------------------------------
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    107234 17 -    539355 CCCTATTT----------------CAGT-GA-CAT----------------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                2602 17 +      9917 CTCTACTT----------------TGAT-GA-GGT----------------------------------
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9401 17 +     20590 CTCTACTT----------------TGAT-GA-GGT----------------------------------
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355335 51 - 186847797 TCCTATTT----------------TGGT-GA-GGCTGTCACCAAAACACTATGGGTTTGGTCTAAGTCc
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26189 16 -     33621 TACTACTT-----------------TGG-GA-GGA----------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21264 17 -     31044 TCCTCCTT----------------TGGG-GG-GCT----------------------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481775 17 -    610378 TCCTACTT----------------TGGT-GA-GAT----------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23083 49 +     26378 TCCTATTT----------------TG---GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     35882 49 -     78344 TCCTATTT----------------TGG---A-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22408 49 +     25722 TCCTATTT----------------TG---GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      30838 49 -     62838 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacact--gggtttggtctaagtcc
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           30827 51 +     46913 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11566 49 -     28527 TCCTATTT----------------TG---GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      32773 49 -     64340 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacact--gggtttggtctaagtcc
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          30811 49 -     63452 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacact--gggtttggtctaagtcc
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12258 49 +     22490 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacact--gggtttggtctaagtcc
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_591572                         5624 51 -      6147 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Trachypithecus_melamera.k141_591572                    C 0 C 0
s Trachypithecus_obscurus.k141_848057                        12537 51 -     13050 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Trachypithecus_obscurus.k141_848057                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             257701 49 -   6242583 TCCTATTT----------------TGG---A-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        3795 51 +     19340 TCCTATTT----------------TGGT-GA-GGCtgttaccaaaacactatgggtttggtctaagtcc
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175514 17 -    200418 TCTTACTT----------------TGGT-GA-GGT----------------------------------
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6483300 12 -  10818551 -----cgc----------------tTAC-AT-GGT----------------------------------
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1837312 17 -   4065304 TCCTACAT----------------TGGT-GA-GGT----------------------------------
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      11363 17 -     70247 TCTTACAT----------------TGGT-GA-GGT----------------------------------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367393 17 -  33153633 TCCTACTT----------------TGGT-GA-GCA----------------------------------
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    5193 17 -     21056 TCTTACTT----------------TGGT-GA-GGT----------------------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                183728 17 +   5085361 TCCTACTT----------------TGGT-GA-AGT----------------------------------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_787544                                  27231 17 -     30710 TCCTTTTT----------------GGGT-GA-GGT----------------------------------
i Varecia_rubra.k141_787544                              C 0 C 0
s Varecia_variegata.k141_289850                              26138 17 -    147434 TCCTTTTT----------------GGGT-GA-GGT----------------------------------
i Varecia_variegata.k141_289850                          C 0 C 0
s Vicugna_pacos.KN270157.1                                   77922 17 +   5488506 TCCAACTT----------------TGGT-GA-AGT----------------------------------
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106651 17 -    112863 TCCTACTT----------------TGGT-GA-GAT----------------------------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        176083 17 -    224448 TCATACTT----------------TGGT-TA-GGT----------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30727 17 -     86975 TCCTACTT----------------TGGT-GA-AGT----------------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1498 16 -      1899 TCTTACTT----------------CTGT--G-TGT----------------------------------
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 C 0
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Saimiri_ustus.k141_360372                                  31938  0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16784  0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29383  0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32692  0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       32306  0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110739  0 + 121099817 C
e Elephantulus_edwardii.JH947257.1                         1227257 63261 +  10337057 T
e Callibella_humilis.k141_1233062                            11864  0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Sapajus_macrocephalus.k141_796559                           9558  0 +     21866 C
e Sapajus_apella.ctg103                                     239968  0 +   5703754 C
e Saguinus_oedipus.k141_1368863                                616  0 +     10417 C
e Saguinus_mystax.k141_6319370                                1276  0 +     10149 C
e Saguinus_midas.LG03                                       394567  0 - 209938924 C
e Saguinus_labiatus.k141_264497                               3661  0 -      7443 C
e Saguinus_inustus.k141_4502137                                856  0 +      4564 C
e Saguinus_imperator.k141_2710097                            15976  0 -     24931 C
e Saguinus_geoffroyi.k141_356064                               373  0 +      9876 C
e Saguinus_bicolor.k141_161125                                8912  0 +     12412 C
e Plecturocebus_moloch.k141_1031110                          45651  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          44184  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      16258  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          9331  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          44283  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          9332  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44634  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       44240  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4836  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9754  0 +     39866 C
e Pithecia_vanzolinii.k141_1369553                           33337  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              558323  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33353  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33593  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               33317  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7569  0 -     25401 C
e Pithecia_albicans.k141_1239476                             66481  0 +    207309 C
e Mico_schneideri.k141_1877700                                     20782  0 -     26561 C
e Mico_humeralifer.k141_1180625                              12463  0 -     12984 C
e Mico_argentatus.k141_582562                                11963  0 +     17804 C
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Leontopithecus_rosalia.k141_1583055                         5369  0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      567  0 +      8855 C
e Leontocebus_nigricollis.k141_1320036                         377  0 +      3713 C
e Leontocebus_illigeri.k141_2759473                            734  0 -     14280 C
e Leontocebus_fuscicollis.k141_3470480                         421  0 -     23187 C
e Lagothrix_lagothricha.k141_246028                          44940  0 +    110728 C
e Chiropotes_sagulatus.k141_1113111                           9664  0 +     34062 C
e Chiropotes_israelita.k141_313004                           44113  0 -    112038 C
e Chiropotes_albinasus.k141_1091259                          33016  0 -     52013 C
e Cheracebus_torquatus.k141_890198                           21042  0 +     39636 C
e Cheracebus_regulus.k141_471822                             21253  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20998  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10585  0 -     32913 C
e Cebus_unicolor.k141_1654760                                68744  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9648  0 -     34880 C
e Cebus_albifrons.Contig27                                  374591  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44838  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6780  0 -     12580 C
e Callithrix_kuhlii.k119_102356                               3381  0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455859  0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3470  0 -      8861 C
e Callimico_goeldii.k141_1609886                             11377  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         22212  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  22299  0 +     95584 C
e Cacajao_calvus.k141_89051                                  44773  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9479  0 +     28062 C
e Ateles_paniscus.k141_866194                                24673  0 -     33135 C
e Ateles_marginatus.k141_970259                              50615  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              35246  0 +     44353 C
e Ateles_chamek.k141_615173                                   7690  0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12555  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276389  0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      25938  7 -     32367 I
e Aotus_vociferans.k141_1514463                               3326  0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3767  0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673773  0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3491  0 -     15923 C
e Aotus_azarae.k141_887050                                    2866  0 +     17741 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Alouatta_seniculus.k141_928287                             34633  0 +     42133 C
e Alouatta_puruensis.k141_251022                             10499  0 +     30854 C
e Alouatta_palliata.k141_638677                              48326  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42677  0 +     45454 C
e Alouatta_macconnelli.k141_1277969                           1160  0 -      3959 C
e Alouatta_juara.k141_1687208                                44052  0 -     64179 C
e Alouatta_discolor.k141_2561099                             45595  0 +     55831 C
e Alouatta_caraya.k141_1109140                               46162  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73924  0 -     84148 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       9185 57 +     36723 tgctgct-cactgcacagaaagccaatcactgagat-ggtga-gtgtttccagggaagaa
s Allenopithecus_nigroviridis.k141_3755588                   50135 50 +     53615 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Allenopithecus_nigroviridis.k141_3755588               C 0 I 1
s Allochrocebus_lhoesti.k141_3412094                          2162 50 +     13857 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Allochrocebus_lhoesti.k141_3412094                     C 0 I 1
s Allochrocebus_preussi.k141_1993939                         18717 50 -     21945 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Allochrocebus_preussi.k141_1993939                     C 0 I 1
s Allochrocebus_solatus.k141_3554717                         20402 50 +     32033 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Allochrocebus_solatus.k141_3554717                     C 0 I 1
s Cercocebus_atys.KQ010504.1                                143218 50 -   4669795 tgctgct-cactgcacagaaagcca-------agaT-GATGA-Gggttgccaaggaagaa
i Cercocebus_atys.KQ010504.1                             C 0 I 1
s Cercocebus_chrysogaster.k141_1522556                       46957 50 +     47900 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Cercocebus_chrysogaster.k141_1522556                   C 0 I 1
s Cercocebus_lunulatus.k141_2500334                           2390 50 -     14410 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Cercocebus_lunulatus.k141_2500334                      C 0 I 1
s Cercocebus_torquatus.k141_2159127                          46772 50 -    148725 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Cercocebus_torquatus.k141_2159127                      C 0 I 1
s Cercopithecus_ascanius.k141_3120866                        29050 50 -     40656 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Cercopithecus_ascanius.k141_3120866                    C 0 I 1
s Cercopithecus_cephus.k141_4183004                           9009 50 +     20796 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Cercopithecus_cephus.k141_4183004                      C 0 I 1
s Cercopithecus_diana.k141_132293                            14123 50 -     17524 tgctgct-cattgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Cercopithecus_diana.k141_132293                        C 0 I 1
s Cercopithecus_hamlyni.k141_566925                          29855 50 -     34525 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgcccaggaagaa
i Cercopithecus_hamlyni.k141_566925                      C 0 I 1
s Cercopithecus_lowei.k141_2101310                           13635 50 -     25376 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgtcaaggaagaa
i Cercopithecus_lowei.k141_2101310                       C 0 I 1
s Cercopithecus_albogularis.ctg5                                  366222 50 -  39242232 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Cercopithecus_albogularis.ctg5                               C 0 I 1
s Cercopithecus_mona.ctg39                                  271949 50 +  21565898 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgtcaaggaagaa
i Cercopithecus_mona.ctg39                               C 0 I 1
s Cercopithecus_neglectus.k141_858615                        34314 50 -     45857 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgtcaaggaagaa
i Cercopithecus_neglectus.k141_858615                    C 0 I 1
s Cercopithecus_nictitans.k141_2995370                       29215 50 -     32606 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Cercopithecus_nictitans.k141_2995370                   C 0 I 1
s Cercopithecus_petaurista.k141_42573                         5378 50 +      8499 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgtcaaggaagaa
i Cercopithecus_petaurista.k141_42573                    C 0 I 1
s Cercopithecus_pogonias.k141_6079                           27776 50 +     70610 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgtcaaggaagaa
i Cercopithecus_pogonias.k141_6079                       C 0 I 1
s Cercopithecus_roloway.k141_3012935                         24737 50 +     36323 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Cercopithecus_roloway.k141_3012935                     C 0 I 1
s Chlorocebus_aethiops.ctg25                                345637 50 +  18827391 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Chlorocebus_aethiops.ctg25                             C 0 I 1
s Chlorocebus_pygerythrus.k141_3063162                       12176 50 -     44032 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Chlorocebus_pygerythrus.k141_3063162                   C 0 I 1
s Chlorocebus_sabaeus.CM001947.1                            307023 50 - 135778131 tgctgct-cactgcacagaaagcca-------agaT-GATGA-Gggttgccaaggaagaa
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 1
s Colobus_angolensis.KN981557.1                             411436 50 -   2368649 tgctgct-cactgcacagaaagcca-------agaT-GATGG-Gggttgccaaggaagaa
i Colobus_angolensis.KN981557.1                          C 0 I 1
s Colobus_guereza.LG01                                      381318 50 - 200372422 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Colobus_guereza.LG01                                   C 0 I 1
s Colobus_polykomos.k141_906115                               4875 50 -     84244 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Colobus_polykomos.k141_906115                          C 0 I 1
s Erythrocebus_patas.Contig38                               265165 50 +  21539334 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Erythrocebus_patas.Contig38                            C 0 I 1
s Gorilla_beringei.k141_935316                                 253 57 +     34797 tgctgct-cactgcacagaaagccaatcactgagat-ggtga-gtgtttccagggaagaa
i Gorilla_beringei.k141_935316                           I 4 C 0
s Gorilla_gorilla.LT578341.1                                258345 57 - 186649187 tgctgct-cactgcacagaaagccaatcactgagat-ggtga-gtgtttccagggaagaa
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    144819 57 -    630532 tgctgct-cactgcacagaaagccaattactgagat-ggtga-gtgttgccagggaagaa
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               7850 57 +     12352 tgctgct-cactgcacagaaagccaatcactgagat-ggtga-gtgttgccagggaagaa
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15035 57 +     55766 tgctgct-cactgcacagaaagccaatcactgagat-ggtga-gtgttgccagggaagaa
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054564 57 + 191637585 tgctgct-cactgcacagaaagccaatcactgagat-ggtga-gtgttgccagggaagaa
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803442 57 +  11177569 tgctgct-cactgcacagaaagccaatcactgagat-ggtga-gtgttgccagggaagaa
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336100 50 -   1826925 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Lophocebus_aterrimus.ctg367                            C 0 I 1
s Macaca_arctoides.k141_1757516                              47492 50 -     61512 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Macaca_arctoides.k141_1757516                          C 0 I 1
s Macaca_assamensis.Contig5                                 375154 50 -  60120075 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Macaca_assamensis.Contig5                              C 0 I 1
s Macaca_cyclopis.k119_263443                                27422 50 +     30207 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Macaca_cyclopis.k119_263443                            C 0 I 1
s Macaca_fascicularis.k141_1617581                            2260 50 -      5035 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Macaca_fascicularis.k141_1617581                       C 0 I 1
s Macaca_fuscata.k119_546792                                 27375 50 +     30527 tgctgcc-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Macaca_fuscata.k119_546792                             C 0 I 1
s Macaca_leonina.k141_321385                                 38551 50 -     50087 tgctgct-cactgcacagaaaacca-------agat-gatga-gggttgccaaggaagaa
i Macaca_leonina.k141_321385                             C 0 I 1
s Macaca_maura.k141_1103459                                  48296 50 +     51645 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Macaca_maura.k141_1103459                              C 0 I 1
s Macaca_mulatta.NC_041758.1                                417498 50 - 187317192 tgctgct-cactgcacagaaagcca-------agaT-GATGA-Gggttgccaaggaagaa
i Macaca_mulatta.NC_041758.1                             C 0 I 1
s Macaca_nemestrina.KQ007038.1                              401729 50 +  25927173 tgctgct-cactgcacagaaagcca-------agaT-GATGA-Gggttgccaaggaagaa
i Macaca_nemestrina.KQ007038.1                           C 0 I 1
s Macaca_nigra.k141_2818840                                  50900 50 -     62418 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Macaca_nigra.k141_2818840                              C 0 I 1
s Macaca_radiata.k141_2139468                                 3431 50 +     14901 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Macaca_radiata.k141_2139468                            C 0 I 1
s Macaca_siberu.k141_2185972                                 47373 50 +     59329 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Macaca_siberu.k141_2185972                             C 0 I 1
s Macaca_silenus.Contig273                                  273280 50 +    668171 tgctgct-cactgcacagaaaacca-------agat-gatga-gggttgccaaggaagaa
i Macaca_silenus.Contig273                               C 0 I 1
s Macaca_thibetana.k99_45532                                  1912 50 -      5049 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Macaca_thibetana.k99_45532                             C 0 I 1
s Macaca_tonkeana.k141_339739                                 5078 50 +     17132 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Macaca_tonkeana.k141_339739                            C 0 I 1
s Mandrillus_leucophaeus.scaffold280                        324568 50 +  24302211 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Mandrillus_leucophaeus.scaffold280                     C 0 I 1
s Mandrillus_sphinx.Contig270                               359399 50 -    752769 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Mandrillus_sphinx.Contig270                            C 0 I 1
s Miopithecus_ogouensis.k141_1534655                         24666 50 -     27822 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Miopithecus_ogouensis.k141_1534655                     C 0 I 1
s Nasalis_larvatus.k141_1350636                              31445 50 +     34575 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Nasalis_larvatus.k141_1350636                          C 0 I 1
s Nomascus_annamensis.k141_1771965                           55737 56 -    132029 tgct-ct-cactgcacagaaagccaatcactgagat-ggtga-gtgttgccagcgaagaa
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11846 56 -     16345 tgct-ct-cactgcacagaaagccaatcactgagat-ggtga-gtgttgccagcgaagaa
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             17731 56 +     22201 tgct-ct-cactgcacagaaagccaatcactgagat-ggtga-gtgttgccagcgaagaa
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8415952 56 -  22158432 tgct-ct-cactgcacagaaagccaatcactgagat-ggtga-gtgttgccagcgaagaa
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28129 56 -     54323 tgct-ct-cactgcacagaaagccaatcactgagat-ggtga-gtgttgccagcgaagaa
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_paniscus.AJFE02001033.1                                 1028 57 +      1169 Tgctgct-cactgcacagaaagccaatcactgagat-ggTGA-GTGTTTCCAGGGAAGAA
i Pan_paniscus.AJFE02001033.1                            I 522 n 61
s Pan_troglodytes.CM009242.2                               1476320 57 - 189151597 tgctgct-cactgcacagaaagccaatcactgagat-ggTGA-GTGTTTCCAGGGAAGAA
i Pan_troglodytes.CM009242.2                             I 4 I 210
s Papio_anubis.CM001495.2                                   245577 50 - 183742232 tgctgct-cactgcacagaaagcca-------agaT-GATGA-Gggttgccaaggaagaa
i Papio_anubis.CM001495.2                                C 0 I 1
s Papio_cynocephalus.k141_1507553                            11862 50 +     21308 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Papio_cynocephalus.k141_1507553                        C 0 I 1
s Papio_hamadryas.Contig39                                  294605 50 -  20919399 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Papio_hamadryas.Contig39                               C 0 I 1
s Papio_kindae.k141_2214839                                  24502 50 -     27687 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Papio_kindae.k141_2214839                              C 0 I 1
s Papio_papio.k141_3538738                                    1181 50 +     10553 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Papio_papio.k141_3538738                               C 0 I 1
s Papio_ursinus.k141_5784434                                  1141 50 -     10386 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Papio_ursinus.k141_5784434                             C 0 I 1
s Piliocolobus_badius.k141_2704958                            4824 50 +     55023 tgctgct-ccctgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Piliocolobus_badius.k141_2704958                       C 0 I 1
s Piliocolobus_gordonorum.k141_381342                         4346 50 -     89929 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Piliocolobus_gordonorum.k141_381342                    C 0 I 1
s Piliocolobus_kirkii.k141_1310104                            4936 50 +     40849 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaaaaa
i Piliocolobus_kirkii.k141_1310104                       C 0 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                  256666 50 +  14605196 Tgctgct-cactgcacagaaagcca-------agaT-GATGA-Gggttgccaaggaagaa
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 1
s Pongo_abelii.CM009266.2                                   181505 57 - 189387572 tgctgct-cactgcacagaaagccaatcactgagat-ggTGA-GTGTTGCCAGGGAATAA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196245 57 -   9816681 tgctgct-cactgcacagaaagccaatcactgagat-ggtga-gtgttgccagggaagaa
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30025 50 +     69807 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Presbytis_comata.k141_1230337                          C 0 I 1
s Presbytis_mitrata.k141_584736                              47206 50 -     80239 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Presbytis_mitrata.k141_584736                          C 0 I 1
s Pygathrix_cinerea.k141_1153803                             29392 50 +     91421 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Pygathrix_cinerea.k141_1153803                         C 0 I 1
s Pygathrix_nigripes_b.ctg100                                  155944 50 -   7812017 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Pygathrix_nigripes_b.ctg100                               C 0 I 1
s Pygathrix_nigripes_a.k141_215492                             10249 50 +     72585 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Pygathrix_nigripes_a.k141_215492                         C 0 I 1
s Rhinopithecus_bieti.k119_778604                             3854 50 +      7119 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Rhinopithecus_bieti.k119_778604                        C 0 I 1
s Rhinopithecus_roxellana.NC_044550.1                    104124524 50 + 195417433 tgctgct-cactgcacagaaagcca-------agaT-GATGA-Gggttgccaaggaagaa
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 1
s Rhinopithecus_strykeri.ctg102                             238696 50 -   7961872 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Rhinopithecus_strykeri.ctg102                          C 0 I 1
s Semnopithecus_entellus.k141_583282                           831 50 +     11297 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Semnopithecus_entellus.k141_583282                     C 0 I 1
s Semnopithecus_hypoleucos.k141_1910531                      31224 50 +     58920 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Semnopithecus_hypoleucos.k141_1910531                  C 0 I 1
s Semnopithecus_johnii.k141_843753                           17722 50 -     45317 tgctgct-cactgcacagaaagcca-------cgat-gatga-gggttgccaaggaagaa
i Semnopithecus_johnii.k141_843753                       C 0 I 1
s Semnopithecus_priam.k141_714795                            25380 50 -     42441 tgctgct-cactgcacagaaagcca-------cgat-gatga-gggttgccaaggaagaa
i Semnopithecus_priam.k141_714795                        C 0 I 1
s Semnopithecus_schistaceus.k141_1432920                     28056 50 -     29113 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Semnopithecus_schistaceus.k141_1432920                 C 0 I 1
s Semnopithecus_vetulus.k141_244474                          31133 50 -     48123 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Semnopithecus_vetulus.k141_244474                      C 0 I 1
s Symphalangus_syndactylus.tarseq_199                       393217 57 +   1523678 tgctgct-cactgcacagaaagccaatcactgagat-ggtga-gtgttgccagggaagaa
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                           355386 50 - 186847797 tgctgct-cactgcacagaaagcca-------agaT-GATGA-Gggttgccaaggaagaa
i Theropithecus_gelada.CM009954.1                        C 0 I 1
s Trachypithecus_auratus.k141_1189070                        23132 50 +     26378 tgctgct-cactgcacagaaagccc-------agat-ggtga-gggttgccaaggaagaa
i Trachypithecus_auratus.k141_1189070                    C 0 I 60
s Trachypithecus_crepusculus.k141_539312                     35931 43 -     78344 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaa-------
i Trachypithecus_crepusculus.k141_539312                 C 0 I 8
s Trachypithecus_cristatus.k141_180416                       22457 50 +     25722 tgctgct-cactgcacagaaagccc-------agat-ggtga-gggttgccaaggaagaa
i Trachypithecus_cristatus.k141_180416                   C 0 I 60
s Trachypithecus_francoisi.k141_1453105                      30887 50 -     62838 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Trachypithecus_francoisi.k141_1453105                  C 0 I 1
s Trachypithecus_geei.k141_1001272                           30878 50 +     46913 tgctgct-cactgcatagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Trachypithecus_geei.k141_1001272                       C 0 I 1
s Trachypithecus_germaini.k141_57262                         11615 50 -     28527 tgctgct-cactgcacagaaagccc-------agat-ggtga-gggttgccaaggaagaa
i Trachypithecus_germaini.k141_57262                     C 0 I 60
s Trachypithecus_hatinhensis.k141_31479                      32822 50 -     64340 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 1
s Trachypithecus_laotum.k141_928651                          30860 50 -     63452 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Trachypithecus_laotum.k141_928651                      C 0 I 1
s Trachypithecus_leucocephalus.k141_96450                    12307 50 +     22490 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Trachypithecus_leucocephalus.k141_96450                C 0 I 1
s Trachypithecus_melamera.k141_591572                         5675 49 -      6147 tgctgct-cactgcacagaaagcca-------agat-gatga-gggttgccaaggaaga-
i Trachypithecus_melamera.k141_591572                    C 0 N 0
s Trachypithecus_obscurus.k141_848057                        12588 50 -     13050 tgctgct-cactgcacagaaagcca-------agat-ggtga-gggttgccaaggaagaa
i Trachypithecus_obscurus.k141_848057                    C 0 N 0
s Trachypithecus_phayrei.ctg124                             257750 50 -   6242583 tgctgct-cactgcacagaaagcca-------agat-ggtga-gggttgccaaggaagaa
i Trachypithecus_phayrei.ctg124                          C 0 I 78
s Trachypithecus_pileatus.k141_2622778                        3846 50 +     19340 tgctgct-cactgcatagaaagcca-------agat-gatga-gggttgccaaggaagaa
i Trachypithecus_pileatus.k141_2622778                   C 0 I 1
e Fukomys_damarensis.KN121974.1                            2924066  0 -   3816255 C
e Myocastor_coypus.MyoCoy_scaffold_15261                     65008 2086 +     67721 I
e Sorex_araneus.JH798187.1                                 4672859  0 +  18376816 C
e Erinaceus_europaeus.JH835339.1                           3668024  0 +   7059049 C
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Capromys_pilorides.CapPil_scaffold_762519                   1425 14 -      1607 I
e Chinchilla_lanigera.JH722012.1                           1240651 14 -   2543920 I
e Nannospalax_galili.KL204047.1                             948241 19 +   3037898 I
e Saimiri_ustus.k141_360372                                  31938  0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16784  0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29383  0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32692  0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       32306  0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110739  0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            30032  0 +     75252 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                255  0 -      4087 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              26205  0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     33990  0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_89005        3838  0 +      9367 C
e Octodon_degus.JH651603.1                                11057105 14 -  11899542 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73704  0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1934453  0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 11118  0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   7367  0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18952456  0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                   100725 14 -    115145 I
e Cuniculus_paca.CunPac_flattened_line_7025                   9022  0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  20495 14 +     50838 I
e Cavia_tschudii.CavTsc_scaffold_23560                       64821  0 -     66877 C
e Cavia_porcellus.DS562891.1                               5001742  0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4998300  0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    48252  0 +    145209 C
e Echinops_telfairi.JH980293.1                            62857049  0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_201229               1508  0 +     11607 C
e Elephantulus_edwardii.JH947257.1                         1227257 63261 +  10337057 T
e Desmodus_rotundus.KZ672289.1                            11866870  0 -  20541912 C
e Callibella_humilis.k141_1233062                            11864  0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607853  0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_147047                  377  0 +     10270 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   21281  0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2111560  0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            14187  0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     19866  0 +     24238 C
e Carollia_perspicillata.CarPer_scaffold_107871               1883  0 +      9923 C
e Tupaia_tana.TupTan_flattened_line_394                      11380  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1837329  0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         30744  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                106668  0 -    112863 C
e Ursus_maritimus.KK499267.1                                183745  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              8381  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6315  0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        40780  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1453532  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                199734  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356731  0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046        10115  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             27867  0 -     74585 C
e Lycaon_pictus.CM007581.1                                41616138  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        815104  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24917717  0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45108564  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41616983  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          223848  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10505  0 -     23171 C
e CanFam4.chr16                                           42506869  0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  7013  0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            217301  0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20417181  0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_286923                      1514  0 -      1899 C
e Xerus_inauris.XerIna_scaffold_2302                        176100  0 -    224448 C
e Vicugna_pacos.KN270157.1                                   77939  0 +   5488506 C
e Varecia_variegata.k141_289850                              26155  0 -    147434 C
e Varecia_rubra.k141_787544                                  27248  0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    5210  0 -     21056 C
e Tursiops_truncatus.MRVK01000835.1                       17367410  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6483312  0 -  10818551 C
e Tragulus_javanicus.TraJav_scaffold_3462                   175531  0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    481792  0 -    610378 C
e Tarsius_wallacei.k141_226975                                9418  0 +     20590 C
e Tarsius_lariang.k141_1733899                                2619  0 +      9917 C
e Tapirus_terrestris.TapTer_scaffold_755                    107251  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      193283  0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                4347  0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                15922  0 +     22964 C
e Sus_scrofa.CM000828.4                                    6645597  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             126549  0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1870365  0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1865750  0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    51606 19 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117246  0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           9558  0 +     21866 C
e Sapajus_apella.ctg103                                     239968  0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        9915  0 +     16473 C
e Saguinus_oedipus.k141_1368863                                616  0 +     10417 C
e Saguinus_mystax.k141_6319370                                1276  0 +     10149 C
e Saguinus_midas.LG03                                       394567  0 - 209938924 C
e Saguinus_labiatus.k141_264497                               3661  0 -      7443 C
e Saguinus_inustus.k141_4502137                                856  0 +      4564 C
e Saguinus_imperator.k141_2710097                            15976  0 -     24931 C
e Saguinus_geoffroyi.k141_356064                               373  0 +      9876 C
e Saguinus_bicolor.k141_161125                                8912  0 +     12412 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76941  0 -    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                       2916396  0 +   3329780 C
e Rattus_norvegicus.chr16                                 37024781 19 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                   682  0 -     55207 C
e Puma_concolor.QAVW01001104.1                            18100771  0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3538956  0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5842441  0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            53800  0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            39881 19 +     52041 I
e Propithecus_verreauxi.k141_1047036                         10288  0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       96649  0 -     98465 C
e Propithecus_perrieri.k141_1496898                          36370  0 +     46564 C
e Propithecus_edwardsi.k141_635656                           10056  0 -     30655 C
e Propithecus_diadema.k141_153680                             6319  0 -     11706 C
e Propithecus_coronatus.k141_209299                           5722  0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1568084  0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1984598  0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5976  0 +      7663 C
e Plecturocebus_moloch.k141_1031110                          45651  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          44184  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      16258  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          9331  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          44283  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          9332  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44634  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       44240  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4836  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9754  0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_83166            2829  0 +     19503 C
e Pithecia_vanzolinii.k141_1369553                           33337  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              558323  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33353  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33593  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               33317  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7569  0 -     25401 C
e Pithecia_albicans.k141_1239476                             66481  0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5597  0 +     22231 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               5810  0 -     63832 C
e Peromyscus_maniculatus.KI615324.1                         249823 19 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16711  0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1617758  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3974116  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18463457  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   26131  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       6752  0 +     17875 C
e Ovis_aries.CM001607.2                                   26406233  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107106523  0 - 174332312 C
e Orcinus_orca.KB316932.1                                  8104285  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    6617 19 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    96039 18 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          16522  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         438638  0 -    630418 C
e Noctilio_leporinus.NocLep_scaffold_7894                   129500  0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1233882  0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121344  0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_66571                         4016  0 +     18357 C
e Myotis_lucifugus.GL429869.1                               385231  0 +   4330536 C
e Myotis_davidii.KB100139.1                                4389203  0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9795029  0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_5560               1322  0 -    124358 C
e Mus_spretus.CM004101.1                                  39499056 19 + 130317789 I
e Mus_pahari.LT608297.1                                   58218083 19 +  89631738 I
e Mus_musculus.chr8                                       41690137 19 + 129401213 I
e Mus_caroli.LT608237.1                                   35596598 19 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          42762  0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   20129  0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  27551  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180892  0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   361216  0 +    437263 C
e Mirza_zaza.k141_766280                                     54556  0 -     62432 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             43729  0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6364805  0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15965421 18 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                186663  0 +    200668 C
e Microcebus_murinus.CM007674.1                           74986774  0 +  93316391 C
e Mico_schneideri.k141_1877700                                     20782  0 -     26561 C
e Mico_humeralifer.k141_1180625                              12463  0 -     12984 C
e Mico_argentatus.k141_582562                                11963  0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     89111  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52344 19 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       152174  0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7503014  0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             222453  0 +    317179 C
e Manis_javanica.JSZB01003497.1                             675153  0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                224834  0 -    270270 C
e Loxodonta_africana.GL010049.1                           39086630  0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             342827  0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                      10974  0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                         10964  0 +     24756 C
e Lepilemur_dorsalis.k141_387009                             10964  0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                         10958  0 +     29618 C
e Leontopithecus_rosalia.k141_1583055                         5369  0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      567  0 +      8855 C
e Leontocebus_nigricollis.k141_1320036                         377  0 +      3713 C
e Leontocebus_illigeri.k141_2759473                            734  0 -     14280 C
e Leontocebus_fuscicollis.k141_3470480                         421  0 -     23187 C
e Lemur_catta.scaffold_24                                 14761450  0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_26245                    34019  0 -     49555 C
e Lagothrix_lagothricha.k141_246028                          44940  0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 73483  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1241632  0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11642  0 -     16823 C
e Indri_indri.k141_2415743                                    4332  0 +     11955 C
e Ictidomys_tridecemlineatus.JH393364.1                     388801  0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       9619  0 -    135385 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71759  0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_790761                150  0 +       338 C
e Hipposideros_armiger.JXIK01000431.1                      1553244  0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9248  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1985  0 +      8654 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 11106  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                32399  0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         18796  0 -     53142 C
e Hapalemur_meridionalis.k141_258450                         11794  0 -     42923 C
e Hapalemur_griseus.k141_763500                              62923  0 -     66874 C
e Hapalemur_gilberti.k141_646465                             38052  0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          16653  0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_10447                    4313  0 -     78134 C
e Glis_glis.GliGli_scaffold_163929                            3246  0 -      6791 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93441  0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_51812                3353  0 -     28519 C
e Felis_nigripes.FelNig_flattened_line_31944                 29308  0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185118208  0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              60953  0 -    111500 C
e Eulemur_rufus.k141_514691                                  44562  0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            6843  0 +     30972 C
e Eulemur_mongoz.k141_232305                                 50119  0 -     97555 C
e Eulemur_macaco.k141_1562045                                25924  0 -     75513 C
e Eulemur_fulvus.k141_636316                                 55292  0 -     65740 C
e Eulemur_flavifrons.k141_433119                             44968  0 +     68309 C
e Eulemur_coronatus.k141_384460                              88405  0 +    112731 C
e Eulemur_collaris.k141_601111                               44434  0 -     70999 C
e Eulemur_albifrons.k141_51491                               16725  0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_57114               460  0 +     25849 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           72747  0 -    133382 C
e Equus_przewalskii.KK951119.1                              412957  0 -    498745 C
e Equus_caballus.CM000403.2                               21376975  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3043036  0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12580464  0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           15931 18 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          33995 18 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       241723  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               7889  0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  140888  0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  666088  0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18633539  0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        294505  0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    647315  0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5966  0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213118118 19 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 46355  7 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4579  0 -      8242 C
e Condylura_cristata.JH655891.1                           35808543  0 +  53390261 C
e Chiropotes_sagulatus.k141_1113111                           9664  0 +     34062 C
e Chiropotes_israelita.k141_313004                           44113  0 -    112038 C
e Chiropotes_albinasus.k141_1091259                          33016  0 -     52013 C
e Cheracebus_torquatus.k141_890198                           21042  0 +     39636 C
e Cheracebus_regulus.k141_471822                             21253  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20998  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10585  0 -     32913 C
e Cheirogaleus_medius.k141_759766                             7086  0 -     15404 C
e Cheirogaleus_major.k141_666340                             32583  0 -     33796 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20649  0 +     27315 C
e Cephalopachus_bancanus.k141_1689090                         4691  0 -      5494 C
e Cebus_unicolor.k141_1654760                                68744  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9648  0 -     34880 C
e Cebus_albifrons.Contig27                                  374591  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44838  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6780  0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     81196  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    29618  0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           272732  0 +    496798 C
e Capra_hircus.CM004588.1                                 26593369  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27411095  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1210548  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4666890  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7632603  0 +  17673402 C
e Callithrix_kuhlii.k119_102356                               3381  0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455859  0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3470  0 -      8861 C
e Callimico_goeldii.k141_1609886                             11377  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         22212  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  22299  0 +     95584 C
e Cacajao_calvus.k141_89051                                  44773  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9479  0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1532006  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27546998  0 -  45695690 C
e Bos_mutus.JH880303.1                                      756856  0 +   1948126 C
e Bos_indicus.CM003047.1                                  20358292  0 +  48749331 C
e Bison_bison.KN261452.1                                     23902  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     88373  0 +    124022 C
e Balaenoptera_bonaerensis.DF411050.1                         1633  0 -     25979 C
e Balaenoptera_acutorostrata.KI537508.1                    7965133  0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               8198  0 -     19611 C
e Avahi_laniger.k141_2756659                                  8190  0 +     11645 C
e Ateles_paniscus.k141_866194                                24673  0 -     33135 C
e Ateles_marginatus.k141_970259                              50615  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              35246  0 +     44353 C
e Ateles_chamek.k141_615173                                   7690  0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12555  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276389  0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      25938  7 -     32367 I
e Aotus_vociferans.k141_1514463                               3326  0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3767  0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673773  0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3491  0 -     15923 C
e Aotus_azarae.k141_887050                                    2866  0 +     17741 C
e Antilocapra_americana.AntAmePen_scaffold_21030             52443  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587366  0 +   2318259 C
e Alouatta_seniculus.k141_928287                             34633  0 +     42133 C
e Alouatta_puruensis.k141_251022                             10499  0 +     30854 C
e Alouatta_palliata.k141_638677                              48326  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42677  0 +     45454 C
e Alouatta_macconnelli.k141_1277969                           1160  0 -      3959 C
e Alouatta_juara.k141_1687208                                44052  0 -     64179 C
e Alouatta_discolor.k141_2561099                             45595  0 +     55831 C
e Alouatta_caraya.k141_1109140                               46162  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73924  0 -     84148 C
e Allactaga_bullata.AllBul_scaffold_20030                    20080  0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27785 29 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           814512  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       9242 190 +     36723 gctttca----tccggtgctgcagc-tgaggagatgggagctcagcctcaaatccatcgccctgactga--ctaaaaatggggttttatacaacaggcaagaaatgtaacaatgtgtaggaaacacgaactagggaggaacaa-gga----------ggTCTCATCTGGTGAGTTTCAGTTCTTTAA-----Tgc-tttttttt-tttt---------------ttttgg
s Allenopithecus_nigroviridis.k141_3755588                   50186 198 +     53615 gctttca----tcgggtgctgcagc-cgaggaggtgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Allenopithecus_nigroviridis.k141_3755588               I 1 C 0
s Allochrocebus_lhoesti.k141_3412094                          2213 198 +     13857 gctttca----tcgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaatagtgtataggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Allochrocebus_lhoesti.k141_3412094                     I 1 C 0
s Allochrocebus_preussi.k141_1993939                         18768 198 -     21945 gctttca----tcgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaatagtgtataggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Allochrocebus_preussi.k141_1993939                     I 1 C 0
s Allochrocebus_solatus.k141_3554717                         20453 198 +     32033 gctttca----tcgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaatagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Allochrocebus_solatus.k141_3554717                     I 1 C 0
s Cercocebus_atys.KQ010504.1                                143269 198 -   4669795 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaATAGGGTTTTATACAACAAGCAAGAAATGTAACAGTGTGTAGGAAACATGAATTAGGGAGGAACAA-GGAGGCATCTGGTGGCCTGATGCGGTGAGTTTTAGTTCTTTAA-----TAC-GTACCCCC-C--A----------CCCCG-----A
i Cercocebus_atys.KQ010504.1                             I 1 C 0
s Cercocebus_chrysogaster.k141_1522556                       47008 198 +     47900 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatgtggtgagttttagttctttaa-----tac-gtatcccc-c--acctcg---------------a
i Cercocebus_chrysogaster.k141_1522556                   I 1 C 0
s Cercocebus_lunulatus.k141_2500334                           2441 198 -     14410 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatgcggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Cercocebus_lunulatus.k141_2500334                      I 1 C 0
s Cercocebus_torquatus.k141_2159127                          46823 198 -    148725 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatgcggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Cercocebus_torquatus.k141_2159127                      I 1 C 0
s Cercopithecus_ascanius.k141_3120866                        29101 198 -     40656 gctttca----tcgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Cercopithecus_ascanius.k141_3120866                    I 1 C 0
s Cercopithecus_cephus.k141_4183004                           9060 198 +     20796 gctttca----tcgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Cercopithecus_cephus.k141_4183004                      I 1 C 0
s Cercopithecus_diana.k141_132293                            14174 198 -     17524 gctttca----tcgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatcgggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Cercopithecus_diana.k141_132293                        I 1 C 0
s Cercopithecus_hamlyni.k141_566925                          29906 198 -     34525 tctttca----tcggatgctgcagc-tgaggagatgggagctcagtctcaaatccatctccctgactga--ctaaaaatagggtggtatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Cercopithecus_hamlyni.k141_566925                      I 1 C 0
s Cercopithecus_lowei.k141_2101310                           13686 198 -     25376 gctttca----ttgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtatgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatcgggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Cercopithecus_lowei.k141_2101310                       I 1 C 0
s Cercopithecus_albogularis.ctg5                                  366273 198 -  39242232 gctttca----tcgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatcgggtgagttttagttctttaa-----tat-gtaccccc-c--accct----------c-----a
i Cercopithecus_albogularis.ctg5                               I 1 C 0
s Cercopithecus_mona.ctg39                                  272000 198 +  21565898 gctttca----ttgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatcgggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Cercopithecus_mona.ctg39                               I 1 C 0
s Cercopithecus_neglectus.k141_858615                        34365 198 -     45857 gctttca----tcgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatcgggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Cercopithecus_neglectus.k141_858615                    I 1 C 0
s Cercopithecus_nictitans.k141_2995370                       29266 198 -     32606 gctttca----tcgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatcgggtgagttttagttctttaa-----tat-gtaccccc-c--accct----------c-----a
i Cercopithecus_nictitans.k141_2995370                   I 1 C 0
s Cercopithecus_petaurista.k141_42573                         5429 198 +      8499 gctttca----tcgggtgctgcagc-cgaggagatgggagctcagtctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatcgggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Cercopithecus_petaurista.k141_42573                    I 1 C 0
s Cercopithecus_pogonias.k141_6079                           27827 199 +     70610 gctttca----tcgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatcgggtgagttttagttctttaa-----tat-gtaccccccc--a----------ccccc-----a
i Cercopithecus_pogonias.k141_6079                       I 1 C 0
s Cercopithecus_roloway.k141_3012935                         24788 198 +     36323 gctttca----tcgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Cercopithecus_roloway.k141_3012935                     I 1 C 0
s Chlorocebus_aethiops.ctg25                                345688 198 +  18827391 gctttca----tcgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatataatagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagctctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Chlorocebus_aethiops.ctg25                             I 1 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12227 198 -     44032 gctttca----tcgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatataatagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Chlorocebus_pygerythrus.k141_3063162                   I 1 C 0
s Chlorocebus_sabaeus.CM001947.1                            307074 198 - 135778131 gctttca----TCGGGTGCTGCAGC-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaATAGGGTTTTATACAACAAGCAAGAAATGTAATAGTGTGTAGGAAACATGAATTAGGGAGGAACAA-GGAGGCATCTGGTGGCCTGATCCGGTGAGTTTTAGTTCTTTAA-----TAT-gtaccccc-c--a----------ccccc-----a
i Chlorocebus_sabaeus.CM001947.1                         I 1 C 0
s Colobus_angolensis.KN981557.1                             411487 198 -   2368649 gctttca----TCGGGTGCTGCAGC-CCAGGAGATGGGAGCTCAGCCTCAAATCCGtctccctgactga--ctaaaaGCGGGGTTTTATACAACAAGCAcgaaatgtaacaatgtgtagGAAACATGAATTAGGGAGGAGCAA-GGAGGCATCTGGTGGCCTGATCCAGTGAGTTTTAGTTCTTTAA-----TAC-GTATCCCC-C--A----------CCCCC-----A
i Colobus_angolensis.KN981557.1                          I 1 C 0
s Colobus_guereza.LG01                                      381369 198 - 200372422 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatccgtctccctgactga--ctaaaagcagggttttatacaacaagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccagtgagttttagttctttaa-----tac-gtatcccc-c--a----------ccccc-----a
i Colobus_guereza.LG01                                   I 1 C 0
s Colobus_polykomos.k141_906115                               4926 198 -     84244 gctttca----tcgggtgctgcagc-ccaggagatgggagcgcagcctcaaatccgtctccctgactga--ctaaaagcagggttttatacaacaagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccagtgagttttagttctttaa-----tac-gtatcccc-c--a----------ccccc-----a
i Colobus_polykomos.k141_906115                          I 1 C 0
s Erythrocebus_patas.Contig38                               265216 198 +  21539334 gctttca----tcgggtgctgcagc-cgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaatagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Erythrocebus_patas.Contig38                            I 1 C 0
s Gorilla_beringei.k141_935316                                 310 203 +     34797 gctttca----tccggtgctgcagc-tgaggagaagggagctcagcctcaaatccattgccctgactga--ctaaaaatggggttttatacaacaggcaagaaatgtaacaatgtgtaggaaacacaaattagggaggaacaa-ggagtcatctggtggcctcatctggtgagtttcagttctttaa-----tgc-ttttt-------ttttt-ttttt-----ttttgg
i Gorilla_beringei.k141_935316                           C 0 I 36
s Gorilla_gorilla.LT578341.1                                258402 202 - 186649187 gctttca----tccagtgctgcagc-tgaggagatgggagctcagcctcaaatccatcaccctgactga--ctaaaaatggggttttatacaacaggcaagaaatgtaacaatgtgtaggaaacacaaactagggagcaacaa-ggaggcatctggtggcctcatctggg-agtttcagttctttaa-----tgc-ttttt-------ttttt-ttttt-----ttttgg
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    144876 196 -    630532 gctttca----tccggtgctgcagc-caaggaaatgggagcttagcctcaaatccatcgccctgactga--ctaaaaatagggttttatacaacaggcaagaaacgtaacaatgtgtaggaaacacgaactagggaggaacag-ggaggcatctggtggcctgatctggtgagttgcagttctttaa-----tgc-tttttttt-t--tt-----------------tgg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               7907 211 +     12352 gctttca----tctggtgctgccgc-caaggaaatgggagcttagcctcaaatccatcgccctgactga--ctaaaaatagggttttatacaacaggcaagaaatgtaacaatgtgtaggaaacacgaacgagggaggaacag-ggaggcatctggtggcctgatctggtgagttgcagttctttaa-----tgc-ttttttgt-t--tttttgtttttttt--ttttgg
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15092 213 +     55766 gctttca----tccggtgctgcagc-caaggaaatgggagcttagcctcaaatccatcgccctgactga--ctaaaaatagggttttatacaacaggcaagaaatgtaacaatgtgtaggaaacacgaacgagggaggaacag-ggaggcatctggtggcctgatctggtgagttgcagttctttaa-----tgc-ttttttgt-t--tttttgttttttttttttttgg
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054621 212 + 191637585 gctttca----tccggtgctgcagc-caaggaaatgggagcttagcctcaaatccatcgccctgactga--ctaaaaatagggttttatacaacaggcaagaaatgtaacaatgtgtaggaaacacgaacgagggaggaacag-ggaggcatctggtggcctgatctggtgagttgcagttctttaa-----tgc-ttttttgt-t--ttgtt-ttttgtttttttttgg
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803499 212 +  11177569 gctttca----tccggtgctgcagc-caaggaaatgggagcttagcctcaaatccatcgccctgactga--ctaaaaatagggttttatacaacaggcaagaaatgtaacaatgtgtaggaaacacgaacgagggaggaacag-ggaggcatctggtggcctgatctggtgagttgcagttctttaa-----tgc-ttttttgt-t--ttgtt-ttttgtttttttttgg
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336151 198 -   1826925 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagagaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Lophocebus_aterrimus.ctg367                            I 1 C 0
s Macaca_arctoides.k141_1757516                              47543 198 -     61512 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Macaca_arctoides.k141_1757516                          I 1 C 0
s Macaca_assamensis.Contig5                                 375205 198 -  60120075 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--accctg---------------a
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_263443                                27473 198 +     30207 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaataagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Macaca_cyclopis.k119_263443                            I 1 C 0
s Macaca_fascicularis.k141_1617581                            2311 198 -      5035 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaataagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Macaca_fascicularis.k141_1617581                       I 1 C 0
s Macaca_fuscata.k119_546792                                 27426 198 +     30527 gctttca----tcgggtgctgcagc-tgaggtgatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--a----------cccca-----a
i Macaca_fuscata.k119_546792                             I 1 C 0
s Macaca_leonina.k141_321385                                 38602 198 -     50087 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Macaca_leonina.k141_321385                             I 1 C 0
s Macaca_maura.k141_1103459                                  48347 198 +     51645 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Macaca_maura.k141_1103459                              I 1 C 0
s Macaca_mulatta.NC_041758.1                                417549 198 - 187317192 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaATAGGGTTTTATACAACAAGCAAGAAATGTAACAGTGTGTAGGAAACATGAATAAGGGAGGAACAA-GGAGGCATCTGGTGGCCTGATCCGGTGAGTTTTAGTTCTTTAA-----TAC-GTACCCCC-C--A----------CCCCG-----A
i Macaca_mulatta.NC_041758.1                             I 1 C 0
s Macaca_nemestrina.KQ007038.1                              401780 198 +  25927173 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaATAGGGTTTTATACAACAAGCAAGAAATGTAACAGTGTGTAGGAAACATGAATTAGGGAGGAACAA-GGAGGCATCTGGTGGCCTGATCCGGTGAGTTTTAGTTCTTTAA-----TAT-GTACCCCC-C--A----------CCCCG-----A
i Macaca_nemestrina.KQ007038.1                           I 1 C 0
s Macaca_nigra.k141_2818840                                  50951 198 -     62418 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Macaca_nigra.k141_2818840                              I 1 C 0
s Macaca_radiata.k141_2139468                                 3482 198 +     14901 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Macaca_radiata.k141_2139468                            I 1 C 0
s Macaca_siberu.k141_2185972                                 47424 198 +     59329 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Macaca_siberu.k141_2185972                             I 1 C 0
s Macaca_silenus.Contig273                                  273331 198 +    668171 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Macaca_silenus.Contig273                               I 1 C 0
s Macaca_thibetana.k99_45532                                  1963 198 -      5049 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Macaca_thibetana.k99_45532                             I 1 C 0
s Macaca_tonkeana.k141_339739                                 5129 198 +     17132 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Macaca_tonkeana.k141_339739                            I 1 C 0
s Mandrillus_leucophaeus.scaffold280                        324619 198 +  24302211 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Mandrillus_leucophaeus.scaffold280                     I 1 C 0
s Mandrillus_sphinx.Contig270                               359450 198 -    752769 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Mandrillus_sphinx.Contig270                            I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         24717 198 -     27822 gctttca----tcgggtgctgcagc-tgaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtgagttttagttctttaa-----tat-gtaccccc-c--a----------ccccc-----a
i Miopithecus_ogouensis.k141_1534655                     I 1 C 0
s Nasalis_larvatus.k141_1350636                              31496 198 +     34575 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-gtacccct-c--a----------ccccc-----a
i Nasalis_larvatus.k141_1350636                          I 1 C 0
s Nomascus_annamensis.k141_1771965                           55793 213 -    132029 gctttca----tccggtgctgcagc-caaggaaatgggagcttagcctcaaatccatcgccctgactga--ctaaaaatagggttttatacaacaggcaagaaacgtaacaatgtgtaggaaacacgaactagggaggaacag-ggaggcatctggtggcctgatctggtgagttgaagttctttaa-----tgc-tttttttt-t--ttttttttttttttttttttgg
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              11902 183 -     16345 gctttca----tccggtgctgcagc-caaggaaatgggagcttagcctcaaatccatcgccctgactga--ctaaaaatagggtttcatacaacaggcaagaaacgtaacaatgtgtaggaaacacgaactagggaggaacag-ggaggcatctggtggcctgatctggtgagttgcagttctttaa-----tgc-t---------------------------------
i Nomascus_concolor.k141_735679                          C 0 I 16
s Nomascus_gabriellae.k141_57920                             17787 187 +     22201 gctttca----tccggtgctgcagc-caaggaaatgggagcttagcctcaaatccatcgccctgactga--ctaaaaatagggttttatacaacaggcaagaaacgtaacaatgtgtaggaaacacgaactagggaggaacag-ggaggcatctggtggcctgatctggtgagttgaagttctttaa-----tgc-ttttt-----------------------------
i Nomascus_gabriellae.k141_57920                         C 0 I 16
s Nomascus_siki_b.tarseq_93                            8416008 212 -  22158432 gctttca----tccggtgctgcagc-caaggaaatgggagcttcgcctcaaatccatcgccctgactga--ctaaaaatagggtttcatacaacaggcaagaaacgtaacaatgtgtaggaaacacgaactagggaggaacag-ggaggcatctggtggcctgatctggtgagttgcagttctttaa-----tgc-tttttttt-t--ttttt-ttttttttttttttgg
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28185 210 -     54323 gctttca----tccggtgctgcagc-caaggaaatgggagcttagcctcaaatccatcgccctgactga--ctaaaaatagggtttcatacaacaggcaagaaacgtaacaatgtgtaggaaacacgaactagggaggaacag-ggaggcatctggtggcctgatctggtgagttgcagttctttaa-----tgc-ttttt--t-t--ttttt-ttttttttttttttgg
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_paniscus.AJFE02004362.1                                 1207 132 +      1339 GCTTTCA----Tccggtgctgcagc-tgaggagatgggagctcagcCTCAAATCCATCGCCCTGACTGA--CTAAAAGTGGGGTTTTATACAACAGGCAAGAAATGTGACAATGTGTAGGAAACACGAACTAGGGAGGA-------------------------------------------------------------------------------------------
i Pan_paniscus.AJFE02004362.1                            I 61 N 0
s Pan_troglodytes.NBAG03003091.1                             16161 221 -     26668 GCTTTCCAACTTCCCGTGGTGCAGCAtgaggagatgggagctcagcCTCAAATCCATCGCCCTGACTGA--CTAAAAATGGGGTTTTATACAACAGgcaagaaatgtaacaatgtgtaggAAACACGAACTAGGGAGGAACAAAGGAGTCATCTGGTGGCCTCATCTGGTGAGTT-cagttctttcaattttttt-tttttttt-tttttttt-ttttttt---ttttgg
i Pan_troglodytes.NBAG03003091.1                         I 113 I 131
s Papio_anubis.CM001495.2                                   245628 198 - 183742232 gctttca----tcaggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaATAGGGTTTTATACAACAAGCAAGAAATGTAACAGTGTGTAGGAAACATGAATTAGGGAGGAACAA-GGAGGCATCTGGTGGCCTGATCCGGTAAGTTTTAGTTCTTTAA-----TAC-GTACCCCC-C--A----------CCCCG-----A
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_1507553                            11913 198 +     21308 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtaagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Papio_cynocephalus.k141_1507553                        I 1 C 0
s Papio_hamadryas.Contig39                                  294656 198 -  20919399 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtaagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Papio_hamadryas.Contig39                               I 1 C 0
s Papio_kindae.k141_2214839                                  24553 198 -     27687 gctttca----tcgggtgctgcagc-tgaggagatgggagctaggcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtaagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Papio_kindae.k141_2214839                              I 1 C 0
s Papio_papio.k141_3538738                                    1232 198 +     10553 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtaagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Papio_papio.k141_3538738                               I 1 C 0
s Papio_ursinus.k141_5784434                                  1192 198 -     10386 gctttca----tcgggtgctgcagc-tgaggagatgggagctgagcctcaaatccatctccctgactga--ctaaaaatagggttttatacaacaagcaagaaatgtaacagtgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccggtaagttttagttctttaa-----tac-gtaccccc-c--accccg---------------a
i Papio_ursinus.k141_5784434                             I 1 C 0
s Piliocolobus_badius.k141_2704958                            4875 198 +     55023 gctttca----ctgggtgctgcagc-ccaggagatgggagctcagcctcaaatccgtctccctgactga--ctaaaaacagggttttatacaacaagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccagtgagttttagttctttaa-----tac-gtaacccc-c--a----------ccccc-----a
i Piliocolobus_badius.k141_2704958                       I 1 C 0
s Piliocolobus_gordonorum.k141_381342                         4397 198 -     89929 gctttca----ctgggtgctgcagc-ccaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaacagggttttatacaacaagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccagtgagttttagttctttaa-----tac-gtaacccc-c--a----------ccccc-----a
i Piliocolobus_gordonorum.k141_381342                    I 1 C 0
s Piliocolobus_kirkii.k141_1310104                            4987 198 +     40849 gctttca----ctgggtgctgcagc-ccaggagatgggagctcagcctcaaatccatctccctgactga--ctaaaaacagggttttatacaacaagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatccagtgagttttagttctttaa-----tac-gtaacccc-c--a----------ccccc-----a
i Piliocolobus_kirkii.k141_1310104                       I 1 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256717 198 +  14605196 gctttca----CTGGGTGCTGCAGC-CCAGGAGATGGGAGCTCagcctcaaatccatctccctgactga--ctaaaaACAGGGTTTTATACAACAAgcaagaaatgtaacaatgtgtagGAAACATGAATTAGGGAGGAACAA-GGAGGCATCTGGTGGCCTGATCCAGTGAGTTTTAGTTCTTTAA-----TAC-GTAACCCC-C--A----------CCCCC-----A
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 C 0
s Pongo_abelii.CM009266.2                                   181562 204 - 189387572 GCTTTCA----TCtagtgctgcagc-tgaggagatgggagctcagcCTCAAATCCATCGCCCTGACTGA--CTAAAAATGGGGTTTTATACAACAGgcaagaaatgtaacaatgtgtaggAAACACGAACTAGGGAGGAACAA-GGAGGCATCTGGTGGCCtcatctggtgagtttcagttctttaa-----tgc-tttttttt-t--ttttt-tt--------ttttga
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196302 207 -   9816681 gctttca----tctagtgctgcagc-tgaggagatgggagctcagcctcaaatccatcgccctgactga--ctaaaaatggggttttatacaacaggcaagaaatgtaacaatgtgtaggaaacacgaactagggaggaacaa-ggaggcatctggtggcctcatctggtgagtttcagttctttaa-----tgc-tttttttt-t--ttttt-ttttt-----ttttga
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30076 198 +     69807 gctttca----tcaggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-gtacccct-c--a----------ccccc-----a
i Presbytis_comata.k141_1230337                          I 1 C 0
s Presbytis_mitrata.k141_584736                              47257 198 -     80239 gctttca----tcaggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtcttcctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-gtacccct-c--a----------ccccc-----a
i Presbytis_mitrata.k141_584736                          I 1 C 0
s Pygathrix_cinerea.k141_1153803                             29443 198 +     91421 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttatacaataagcgagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-gtaccctt-c--a----------ccccc-----a
i Pygathrix_cinerea.k141_1153803                         I 1 C 0
s Pygathrix_nigripes_b.ctg100                                  155995 198 -   7812017 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttataccataagcgagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-gtacccct-c--a----------ccccc-----a
i Pygathrix_nigripes_b.ctg100                               I 1 C 0
s Pygathrix_nigripes_a.k141_215492                             10300 198 +     72585 gctttca----tcaggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttataccataagcgagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-gtacccct-c--a----------ccccc-----a
i Pygathrix_nigripes_a.k141_215492                         I 1 C 0
s Rhinopithecus_bieti.k119_778604                             3905 198 +      7119 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtgggctgatctagtgagttttagttctttaa-----tac-gtacccct-c--a----------ccccc-----a
i Rhinopithecus_bieti.k119_778604                        I 1 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124575 198 + 195417433 gctttca----TCGGGTGCTGCAGC-CCAGGAGATGGGAGCTCAgcctcaaatctgtctccctgactGA--CTAAAAACAGGGTTTTATACAATAAgcaagaaatgtaacaatgtgtagGAAACATGAATTAGGGAGGAACAA-GGAGGCATCTGGTGGGCTGATCTAGTGAGTTTTAGTTCTTTAA-----TAC-GTACCCCT-C--A----------CCCCC-----A
i Rhinopithecus_roxellana.NC_044550.1                    I 1 C 0
s Rhinopithecus_strykeri.ctg102                             238747 198 -   7961872 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacaa-ggaggcatctggtgggctgatctagtgagttttagttctttaa-----tac-gtacccct-c--a----------ccccc-----a
i Rhinopithecus_strykeri.ctg102                          I 1 C 0
s Semnopithecus_entellus.k141_583282                           882 198 +     11297 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctctctccctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Semnopithecus_entellus.k141_583282                     I 1 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31275 198 +     58920 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Semnopithecus_hypoleucos.k141_1910531                  I 1 C 0
s Semnopithecus_johnii.k141_843753                           17773 198 -     45317 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Semnopithecus_johnii.k141_843753                       I 1 C 0
s Semnopithecus_priam.k141_714795                            25431 198 -     42441 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Semnopithecus_priam.k141_714795                        I 1 C 0
s Semnopithecus_schistaceus.k141_1432920                     28107 198 -     29113 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Semnopithecus_schistaceus.k141_1432920                 I 1 C 0
s Semnopithecus_vetulus.k141_244474                          31184 198 -     48123 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Semnopithecus_vetulus.k141_244474                      I 1 C 0
s Symphalangus_syndactylus.tarseq_199                       393274 203 +   1523678 gctttca----tccggtgctgcagc-caaggaaatgggagcttagcctcaaatccatcgccctgactga--ctaaaaatagggttttatacaacaggcaggaaacgtaacaatgtgtaggaaacacgaactagggaggaacag-ggaggcatctggtggcctgatctggtgagttgcagttctttaa-----tgc-tttttttt-t--ttttt-t---------ttttgg
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                           355437 198 - 186847797 gctttca----ttgggtgctgcagc-tgaggagatgggagcTGAGCCTCAAATCCATCTGCCTGACtga--ctaaaaataaagttttatacaACAAGCAAGAAATGTAACAGTGTGTAGGAAACAGGAATTAGAGAGGAACAA-GGAGGCATCTGGTGGCCTGATCCGGTGAGTTTTAGTTCTTTAA-----TAC-GTACCCCC-C--A----------CCCCG-----A
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Trachypithecus_auratus.k141_1189070                        23242 139 +     26378 ----------------------------------------------------------------actga--ctaaaaacagggctttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Trachypithecus_auratus.k141_1189070                    I 60 C 0
s Trachypithecus_crepusculus.k141_539312                     35982 198 -     78344 gctttcg----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacggggctttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Trachypithecus_crepusculus.k141_539312                 I 8 C 0
s Trachypithecus_cristatus.k141_180416                       22567 139 +     25722 ----------------------------------------------------------------actga--ctaaaaacagggctttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Trachypithecus_cristatus.k141_180416                   I 60 C 0
s Trachypithecus_francoisi.k141_1453105                      30938 198 -     62838 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagagttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Trachypithecus_francoisi.k141_1453105                  I 1 C 0
s Trachypithecus_geei.k141_1001272                           30929 198 +     46913 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Trachypithecus_geei.k141_1001272                       I 1 C 0
s Trachypithecus_germaini.k141_57262                         11725 139 -     28527 ----------------------------------------------------------------actga--ctaaaaacagggctttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Trachypithecus_germaini.k141_57262                     I 60 C 0
s Trachypithecus_hatinhensis.k141_31479                      32873 198 -     64340 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Trachypithecus_hatinhensis.k141_31479                  I 1 C 0
s Trachypithecus_laotum.k141_928651                          30911 198 -     63452 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Trachypithecus_laotum.k141_928651                      I 1 C 0
s Trachypithecus_leucocephalus.k141_96450                    12358 198 +     22490 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Trachypithecus_leucocephalus.k141_96450                I 1 C 0
s Trachypithecus_melamera.k141_750785                          324 198 +      9911 gctttcg----tcgggtgctgcagc-ccagaagatgggagctcagcctcaaatctgcctccctgactga--ctaaaaacggggctttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Trachypithecus_melamera.k141_750785                    N 0 C 0
s Trachypithecus_obscurus.k141_170351                          119 198 -     33539 gctttcg----ccgggtgctgcagc-ccaggagacgggagctcagcctcaaatctgtctccctgactga--ctaaaaacggggctttatacaataagcaagaaatgtaacaatgtgtaggaaacacgaattagggaggaatga-ggaggcatctggtggcctgatctactgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Trachypithecus_obscurus.k141_170351                    N 0 C 0
s Trachypithecus_phayrei.ctg124                             257878 198 -   6242583 gctttcg----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggctttatacaataagcaagaaatgtaacaatgtgtaggaaacacgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Trachypithecus_phayrei.ctg124                          I 78 C 0
s Trachypithecus_pileatus.k141_2622778                        3897 198 +     19340 gctttca----tcgggtgctgcagc-ccaggagatgggagctcagcctcaaatctgtctccctgactga--ctaaaaacagggttttatacaataagcaagaaatgtaacaatgtgtaggaaacatgaattagggaggaacga-ggaggcatctggtggcctgatctagtgagttttagttctttaa-----tac-atacccct-c--a----------ccccc-----a
i Trachypithecus_pileatus.k141_2622778                   I 1 C 0
e Fukomys_damarensis.KN121974.1                            2924066   0 -   3816255 C
e Myocastor_coypus.MyoCoy_scaffold_15261                     65008 2086 +     67721 I
e Sorex_araneus.JH798187.1                                 4672859   0 +  18376816 C
e Erinaceus_europaeus.JH835339.1                           3668024   0 +   7059049 C
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Capromys_pilorides.CapPil_scaffold_762519                   1425  14 -      1607 I
e Chinchilla_lanigera.JH722012.1                           1240651  14 -   2543920 I
e Nannospalax_galili.KL204047.1                             948241  19 +   3037898 I
e Saimiri_ustus.k141_360372                                  31938   0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16784   0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29383   0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32692   0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       32306   0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110739   0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            30032   0 +     75252 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                255   0 -      4087 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              26205   0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     33990   0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_89005        3838   0 +      9367 C
e Octodon_degus.JH651603.1                                11057105  14 -  11899542 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73704   0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1934453   0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 11118   0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_89095                   7367   0 -     10735 C
e Dipodomys_ordii.KN672350.1                              18952456   0 -  37912305 C
e Dinomys_branickii.DinBra_scaffold_10381                   100725  14 -    115145 I
e Cuniculus_paca.CunPac_flattened_line_7025                   9022   0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  20495  14 +     50838 I
e Cavia_tschudii.CavTsc_scaffold_23560                       64821   0 -     66877 C
e Cavia_porcellus.DS562891.1                               5001742   0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4998300   0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    48252   0 +    145209 C
e Echinops_telfairi.JH980293.1                            62857049   0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_201229               1508   0 +     11607 C
e Elephantulus_edwardii.JH947257.1                         1227257 63261 +  10337057 T
e Desmodus_rotundus.KZ672289.1                            11866870   0 -  20541912 C
e Callibella_humilis.k141_1233062                            11864   0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548   0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607853   0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_147047                  377   0 +     10270 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   21281   0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2111560   0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            14187   0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     19866   0 +     24238 C
e Carollia_perspicillata.CarPer_scaffold_107871               1883   0 +      9923 C
e Tupaia_tana.TupTan_flattened_line_394                      11380   0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1837329   0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         30744   0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                106668   0 -    112863 C
e Ursus_maritimus.KK499267.1                                183745   0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525              8381   0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6315   0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        40780   0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1453532   0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                199734   0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11468589   0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356731   0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046        10115   0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             27867   0 -     74585 C
e Lycaon_pictus.CM007581.1                                41616138   0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        815104   0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24917717   0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45108564   0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41616983   0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          223848   0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10505   0 -     23171 C
e CanFam4.chr16                                           42506869   0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  7013   0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            217301   0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20417181   0 +  29979442 C
e Zapus_hudsonius.ZapHud_scaffold_286923                      1514   0 -      1899 C
e Xerus_inauris.XerIna_scaffold_2302                        176100   0 -    224448 C
e Vicugna_pacos.KN270157.1                                   77939   0 +   5488506 C
e Varecia_variegata.k141_289850                              26155   0 -    147434 C
e Varecia_rubra.k141_787544                                  27248   0 -     30710 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    5210   0 -     21056 C
e Tursiops_truncatus.MRVK01000835.1                       17367410   0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6483312   0 -  10818551 C
e Tragulus_javanicus.TraJav_scaffold_3462                   175531   0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    481792   0 -    610378 C
e Tarsius_wallacei.k141_226975                                9418   0 +     20590 C
e Tarsius_lariang.k141_1733899                                2619   0 +      9917 C
e Tapirus_terrestris.TapTer_scaffold_755                    107251   0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      193283   0 +    199430 C
e Tamandua_tetradactyla.TamTet_scaffold_224794                4347   0 +      5583 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                15922   0 +     22964 C
e Sus_scrofa.CM000828.4                                    6645597   0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             126549   0 +    196729 C
e Spermophilus_dauricus.KZ294078.1                         1870365   0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1865750   0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    51606  19 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117246   0 +    313613 C
e Sapajus_macrocephalus.k141_796559                           9558   0 +     21866 C
e Sapajus_apella.ctg103                                     239968   0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        9915   0 +     16473 C
e Saguinus_oedipus.k141_1368863                                616   0 +     10417 C
e Saguinus_mystax.k141_6319370                                1276   0 +     10149 C
e Saguinus_midas.LG03                                       394567   0 - 209938924 C
e Saguinus_labiatus.k141_264497                               3661   0 -      7443 C
e Saguinus_inustus.k141_4502137                                856   0 +      4564 C
e Saguinus_imperator.k141_2710097                            15976   0 -     24931 C
e Saguinus_geoffroyi.k141_356064                               373   0 +      9876 C
e Saguinus_bicolor.k141_161125                                8912   0 +     12412 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76941   0 -    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                       2916396   0 +   3329780 C
e Rattus_norvegicus.chr16                                 37024781  19 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                   682   0 -     55207 C
e Puma_concolor.QAVW01001104.1                            18100771   0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3538956   0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5842441   0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            53800   0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            39881  19 +     52041 I
e Propithecus_verreauxi.k141_1047036                         10288   0 +     35169 C
e Propithecus_tattersalli.k141_1127767                       96649   0 -     98465 C
e Propithecus_perrieri.k141_1496898                          36370   0 +     46564 C
e Propithecus_edwardsi.k141_635656                           10056   0 -     30655 C
e Propithecus_diadema.k141_153680                             6319   0 -     11706 C
e Propithecus_coronatus.k141_209299                           5722   0 -      7103 C
e Propithecus_coquerelli.NW_012148875.1                    1568084   0 -   2598838 C
e Prolemur_simus.MPIZ01000396.1                            1984598   0 +   4620579 C
e Procavia_capensis.ProCapCap_scaffold_165387                 5976   0 +      7663 C
e Plecturocebus_moloch.k141_1031110                          45651   0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          44184   0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      16258   0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          9331   0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          44283   0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          9332   0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44634   0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       44240   0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4836   0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9754   0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_83166            2829   0 +     19503 C
e Pithecia_vanzolinii.k141_1369553                           33337   0 +     51125 C
e Pithecia_pithecia.tarseq_165                              558323   0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33353   0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33593   0 +     63561 C
e Pithecia_hirsuta.k141_640380                               33317   0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7569   0 -     25401 C
e Pithecia_albicans.k141_1239476                             66481   0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5597   0 +     22231 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               5810   0 -     63832 C
e Peromyscus_maniculatus.KI615324.1                         249823  19 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16711   0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1617758   0 +   2937107 C
e Panthera_tigris.KE722367.1                               3974116   0 +   8748460 C
e Panthera_pardus.KV860321.1                              18463457   0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   26131   0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                       6752   0 +     17875 C
e Ovis_aries.CM001607.2                                   26406233   0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107106523   0 - 174332312 C
e Orcinus_orca.KB316932.1                                  8104285   0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    6617  19 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    96039  18 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          16522   0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         438638   0 -    630418 C
e Noctilio_leporinus.NocLep_scaffold_7894                   129500   0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1233882   0 -   7148211 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121344   0 +    130748 C
e Myotis_myotis.MyoMyo_scaffold_66571                         4016   0 +     18357 C
e Myotis_lucifugus.GL429869.1                               385231   0 +   4330536 C
e Myotis_davidii.KB100139.1                                4389203   0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9795029   0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_5560               1322   0 -    124358 C
e Mus_spretus.CM004101.1                                  39499056  19 + 130317789 I
e Mus_pahari.LT608297.1                                   58218083  19 +  89631738 I
e Mus_musculus.chr8                                       41690137  19 + 129401213 I
e Mus_caroli.LT608237.1                                   35596598  19 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          42762   0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   20129   0 -     63510 C
e Moschus_moschiferus.MosMos_scaffold_13123                  27551   0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180892   0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   361216   0 +    437263 C
e Mirza_zaza.k141_766280                                     54556   0 -     62432 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             43729   0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6364805   0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15965421  18 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                186663   0 +    200668 C
e Microcebus_murinus.CM007674.1                           74986774   0 +  93316391 C
e Mico_schneideri.k141_1877700                                     20782   0 -     26561 C
e Mico_humeralifer.k141_1180625                              12463   0 -     12984 C
e Mico_argentatus.k141_582562                                11963   0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     89111   0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17431709   5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52344  19 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       152174   0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7503014   0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             222453   0 +    317179 C
e Manis_javanica.JSZB01003497.1                             675153   0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                224834   0 -    270270 C
e Loxodonta_africana.GL010049.1                           39086630   0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             342827   0 +    662738 C
e Lepilemur_septentrionalis.k141_360456                      10974   0 +     16388 C
e Lepilemur_ruficaudatus.k141_330196                         10964   0 +     24756 C
e Lepilemur_dorsalis.k141_387009                             10964   0 +     31569 C
e Lepilemur_ankaranensis.k141_567626                         10958   0 +     29618 C
e Leontopithecus_rosalia.k141_1583055                         5369   0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      567   0 +      8855 C
e Leontocebus_nigricollis.k141_1320036                         377   0 +      3713 C
e Leontocebus_illigeri.k141_2759473                            734   0 -     14280 C
e Leontocebus_fuscicollis.k141_3470480                         421   0 -     23187 C
e Lemur_catta.scaffold_24                                 14761450   0 +  30322482 C
e Lasiurus_borealis.LasBor_scaffold_26245                    34019   0 -     49555 C
e Lagothrix_lagothricha.k141_246028                          44940   0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 73483   0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1241632   0 +   9596543 C
e Inia_geoffrensis.IniGeo_flattened_line_69447               11642   0 -     16823 C
e Indri_indri.k141_2415743                                    4332   0 +     11955 C
e Ictidomys_tridecemlineatus.JH393364.1                     388801   0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                       9619   0 -    135385 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71759   0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_790761                150   0 +       338 C
e Hipposideros_armiger.JXIK01000431.1                      1553244   0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9248   0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1985   0 +      8654 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 11106   0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                32399   0 -    327341 C
e Hapalemur_occidentalis.k141_578367                         18796   0 -     53142 C
e Hapalemur_meridionalis.k141_258450                         11794   0 -     42923 C
e Hapalemur_griseus.k141_763500                              62923   0 -     66874 C
e Hapalemur_gilberti.k141_646465                             38052   0 +     49394 C
e Hapalemur_alaotrensis.k141_330369                          16653   0 -     40692 C
e Graphiurus_murinus.GraMur_scaffold_10447                    4313   0 -     78134 C
e Glis_glis.GliGli_scaffold_163929                            3246   0 -      6791 C
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93441   0 -     95226 C
e Galeopterus_variegatus.GalVar_scaffold_51812                3353   0 -     28519 C
e Felis_nigripes.FelNig_flattened_line_31944                 29308   0 -     30238 C
e Felis_catus_fca126.CM031415.1                          185118208   0 - 205367284 C
e Eulemur_sanfordi.k141_1122526                              60953   0 -    111500 C
e Eulemur_rufus.k141_514691                                  44562   0 -     52037 C
e Eulemur_rubriventer.k141_1423786                            6843   0 +     30972 C
e Eulemur_mongoz.k141_232305                                 50119   0 -     97555 C
e Eulemur_macaco.k141_1562045                                25924   0 -     75513 C
e Eulemur_fulvus.k141_636316                                 55292   0 -     65740 C
e Eulemur_flavifrons.k141_433119                             44968   0 +     68309 C
e Eulemur_coronatus.k141_384460                              88405   0 +    112731 C
e Eulemur_collaris.k141_601111                               44434   0 -     70999 C
e Eulemur_albifrons.k141_51491                               16725   0 -     24895 C
e Eubalaena_japonica.EubJap_flattened_line_57114               460   0 +     25849 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           72747   0 -    133382 C
e Equus_przewalskii.KK951119.1                              412957   0 -    498745 C
e Equus_caballus.CM000403.2                               21376975   0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3043036   0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12580464   0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           15931  18 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          33995  18 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       241723   0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               7889   0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  140888   0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  666088   0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18633539   0 -  35494412 C
e Daubentonia_madagascariensis.ctg71                        294505   0 +  12879189 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    647315   0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5966   0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213118118  19 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 46355   7 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4579   0 -      8242 C
e Condylura_cristata.JH655891.1                           35808543   0 +  53390261 C
e Chiropotes_sagulatus.k141_1113111                           9664   0 +     34062 C
e Chiropotes_israelita.k141_313004                           44113   0 -    112038 C
e Chiropotes_albinasus.k141_1091259                          33016   0 -     52013 C
e Cheracebus_torquatus.k141_890198                           21042   0 +     39636 C
e Cheracebus_regulus.k141_471822                             21253   0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20998   0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10585   0 -     32913 C
e Cheirogaleus_medius.k141_759766                             7086   0 -     15404 C
e Cheirogaleus_major.k141_666340                             32583   0 -     33796 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20649   0 +     27315 C
e Cephalopachus_bancanus.k141_1689090                         4691   0 -      5494 C
e Cebus_unicolor.k141_1654760                                68744   0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9648   0 -     34880 C
e Cebus_albifrons.Contig27                                  374591   0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44838   0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6780   0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     81196   0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    29618   0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           272732   0 +    496798 C
e Capra_hircus.CM004588.1                                 26593369   0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27411095   0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1210548   0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4666890   0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7632603   0 +  17673402 C
e Callithrix_kuhlii.k119_102356                               3381   0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455859   0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3470   0 -      8861 C
e Callimico_goeldii.k141_1609886                             11377   0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         22212   0 +    119600 C
e Cacajao_hosomi.k141_81245                                  22299   0 +     95584 C
e Cacajao_calvus.k141_89051                                  44773   0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9479   0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1532006   0 -   4408762 C
e Bos_taurus.CM000203.6                                   27546998   0 -  45695690 C
e Bos_mutus.JH880303.1                                      756856   0 +   1948126 C
e Bos_indicus.CM003047.1                                  20358292   0 +  48749331 C
e Bison_bison.KN261452.1                                     23902   0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     88373   0 +    124022 C
e Balaenoptera_bonaerensis.DF411050.1                         1633   0 -     25979 C
e Balaenoptera_acutorostrata.KI537508.1                    7965133   0 -  23207421 C
e Avahi_peyrierasi.k141_1823318                               8198   0 -     19611 C
e Avahi_laniger.k141_2756659                                  8190   0 +     11645 C
e Ateles_paniscus.k141_866194                                24673   0 -     33135 C
e Ateles_marginatus.k141_970259                              50615   0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              35246   0 +     44353 C
e Ateles_chamek.k141_615173                                   7690   0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12555   0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276389   0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      25938   7 -     32367 I
e Aotus_vociferans.k141_1514463                               3326   0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3767   0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673773   0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3491   0 -     15923 C
e Aotus_azarae.k141_887050                                    2866   0 +     17741 C
e Antilocapra_americana.AntAmePen_scaffold_21030             52443   0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178536   2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587366   0 +   2318259 C
e Alouatta_seniculus.k141_928287                             34633   0 +     42133 C
e Alouatta_puruensis.k141_251022                             10499   0 +     30854 C
e Alouatta_palliata.k141_638677                              48326   0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42677   0 +     45454 C
e Alouatta_macconnelli.k141_1277969                           1160   0 -      3959 C
e Alouatta_juara.k141_1687208                                44052   0 -     64179 C
e Alouatta_discolor.k141_2561099                             45595   0 +     55831 C
e Alouatta_caraya.k141_1109140                               46162   0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73924   0 -     84148 C
e Allactaga_bullata.AllBul_scaffold_20030                    20080   0 -     61208 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27785  29 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           814512   0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       9432 12 +     36723 agaggcctgaag
s Acinonyx_jubatus.LLWD01001279.1                           814512  6 +   1699592 ------CGGTAG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 21
s Ailuropoda_melanoleuca.LNAT01000098.1                   20417181  6 +  29979442 ------CAGTGG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 21
s Ailurus_fulgens.LNAC01001112.1                            217301  6 +    347723 ------CAGTGG
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 21
s Allactaga_bullata.AllBul_scaffold_20030                    20080  5 -     61208 ------GAGGA-
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 19
s Allenopithecus_nigroviridis.k141_3755588                   50384 12 +     53615 agaggcctgtag
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2411 12 +     13857 agaggcctgtag
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18966 12 -     21945 agaggcctgtag
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20651 12 +     32033 agaggcctgtag
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587366  6 +   2318259 ------CAGTAA
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 21
s Antilocapra_americana.AntAmePen_scaffold_21030             52443  6 -     68529 ------CAGTAA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 21
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  7013  6 -     15198 ------CGGTAG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 21
s Avahi_laniger.k141_2756659                                  8190  6 +     11645 ------CAGTAG
i Avahi_laniger.k141_2756659                             C 0 I 21
s Avahi_peyrierasi.k141_1823318                               8198  6 -     19611 ------CAGTAG
i Avahi_peyrierasi.k141_1823318                          C 0 I 21
s Balaenoptera_acutorostrata.KI537508.1                    7965133  6 -  23207421 ------CAATAA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 21
s Balaenoptera_bonaerensis.DF411050.1                         1633  6 -     25979 ------CAATAA
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 21
s Beatragus_hunteri.BeaHun_scaffold_7278                     88373  6 +    124022 ------CAGTAA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 21
s Bison_bison.KN261452.1                                     23902  6 +    288883 ------CAGTAA
i Bison_bison.KN261452.1                                 C 0 I 21
s Bos_indicus.CM003047.1                                  20358292  6 +  48749331 ------CAGTAA
i Bos_indicus.CM003047.1                                 C 0 I 21
s Bos_mutus.JH880303.1                                      756856  6 +   1948126 ------CAGTAA
i Bos_mutus.JH880303.1                                   C 0 I 21
s Bos_taurus.CM000203.6                                   27546998  6 -  45695690 ------CAGTAA
i Bos_taurus.CM000203.6                                  C 0 I 21
s Bubalus_bubalis.KI419123.1                               1532006  6 -   4408762 ------CAGTAA
i Bubalus_bubalis.KI419123.1                             C 0 I 21
s Camelus_bactrianus.KN276810.1                            7632603  6 +  17673402 ------CAATAA
i Camelus_bactrianus.KN276810.1                          C 0 I 21
s Camelus_dromedarius.KN272107.1                           4666890  6 +   7040546 ------CAATAA
i Camelus_dromedarius.KN272107.1                         C 0 I 21
s Camelus_ferus.KB017975.1                                 1210548  6 +   1652518 ------CAATAA
i Camelus_ferus.KB017975.1                               C 0 I 21
s CanFam4.chr16                                           42506869  6 +  60362399 ------CGGTAG
i CanFam4.chr16                                          C 0 I 21
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10505  6 -     23171 ------CGGTAG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 21
s Canis_lupus_dingo.QKWQ01000480.1                          223848  6 +   9314153 ------CGGTAG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 21
s Canis_lupus_familiaris.chr16                            41616983  6 +  59632846 ------CGGTAG
i Canis_lupus_familiaris.chr16                           C 0 I 21
s Canis_lupus_orion.HG994398.1                            45108564  6 -  63665305 ------CGGTAG
i Canis_lupus_orion.HG994398.1                           C 0 I 21
s Capra_aegagrus.CM003241.1                               27411095  4 -  46296322 ------CAGT--
i Capra_aegagrus.CM003241.1                              C 0 I 223
s Capra_hircus.CM004588.1                                 26593369  6 +  44709034 ------CAGTAA
i Capra_hircus.CM004588.1                                C 0 I 21
s Carlito_syrichta.NW_007259797.1                           272732  6 +    496798 ------TAGTGG
i Carlito_syrichta.NW_007259797.1                        C 0 I 21
s Carollia_perspicillata.CarPer_scaffold_107871               1883  6 +      9923 ------CAGTAG
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 21
s Castor_canadensis.CasCan_scaffold_39952                    29618  6 -     39886 ------GAGCAG
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 14
s Catagonus_wagneri.CatWag_scaffold_2839                     81196  6 -    217609 ------CAATGA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 21
s Cavia_aperea.AVPZ01000300.1                              4998300  5 +  23392119 ------GAA-GG
i Cavia_aperea.AVPZ01000300.1                            C 0 I 20
s Cavia_porcellus.DS562891.1                               5001742  5 +  23407841 ------GAA-AG
i Cavia_porcellus.DS562891.1                             C 0 I 20
s Cavia_tschudii.CavTsc_scaffold_23560                       64821  5 -     66877 ------GAA-AG
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 20
s Cephalopachus_bancanus.k141_1689090                         4691  6 -      5494 ------TAGTGG
i Cephalopachus_bancanus.k141_1689090                    C 0 I 21
s Ceratotherium_simum.JH767749.1                          15493816  6 -  27778364 ------CAATAG
i Ceratotherium_simum.JH767749.1                         C 0 I 21
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20649  6 +     27315 ------CAATAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 21
s Cercocebus_atys.KQ010504.1                                143467 12 -   4669795 AGAGACCTGTAG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47206 12 +     47900 agaggcctgtag
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2639 12 -     14410 agagacctgtag
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47021 12 -    148725 agagacctgtag
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29299 12 -     40656 agaggcctgtag
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9258 12 +     20796 agaggcctgtag
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14372 12 -     17524 agaggcctgtag
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30104 12 -     34525 agaggcctgtag
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13884 12 -     25376 agaggcctgtag
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366471 12 -  39242232 agaggcctgtag
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272198 12 +  21565898 agaggcctgtag
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34563 12 -     45857 agaggcctgtag
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29464 12 -     32606 agaggcctgtag
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5627 12 +      8499 agaggcctgtag
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28026 12 +     70610 agaggcctgtag
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24986 12 +     36323 aaaggcctgtag
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            14187  6 -     19938 ------CAGTAG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 21
s Cheirogaleus_major.k141_666340                             32583  6 -     33796 ------CAGTAG
i Cheirogaleus_major.k141_666340                         C 0 I 21
s Cheirogaleus_medius.k141_759766                             7086  6 -     15404 ------CAGTAG
i Cheirogaleus_medius.k141_759766                        C 0 I 21
s Chlorocebus_aethiops.ctg25                                345886 12 +  18827391 agaggcgtgtag
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12425 12 -     44032 agaggcctgtag
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307272 12 - 135778131 agagGCGTGTAG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  377  6 +     10270 ------CAGTAG
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 I 480
s Choloepus_hoffmanni.KN194906.1                            607853  6 -    839153 ------CAGTAG
i Choloepus_hoffmanni.KN194906.1                         C 0 I 480
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                255  6 -      4087 ------CGTTAG
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 I 34
s Colobus_angolensis.KN981557.1                             411685 12 -   2368649 AGAGGCCTGTAG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381567 12 - 200372422 agaggcctgtag
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5124 12 -     84244 agaggcctgtag
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808543  6 +  53390261 ------CAGTAA
i Condylura_cristata.JH655891.1                          C 0 I 21
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4579  6 -      8242 ------CAGTAG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 21
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5966  6 +     87169 ------CAGTAG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 22
s Ctenodactylus_gundi.CteGun_scaffold_65                    647315  6 -   1526836 ------GAGTGG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 21
s Cuniculus_paca.CunPac_flattened_line_7025                   9022  5 +     36344 ------GAA-GG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 20
s Dasyprocta_punctata.DasPun_flattened_line_15900            30032  5 +     75252 ------GAA-GG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 20
s Dasypus_novemcinctus.JH564415.1                          2111560  6 -   2246927 ------CAGTGG
i Dasypus_novemcinctus.JH564415.1                        C 0 I 21
s Daubentonia_madagascariensis.ctg71                        294505  6 +  12879189 ------CAGTAG
i Daubentonia_madagascariensis.ctg71                     C 0 I 21
s Delphinapterus_leucas.KZ290073.1                        18633539  6 -  35494412 ------CAATAA
i Delphinapterus_leucas.KZ290073.1                       C 0 I 21
s Desmodus_rotundus.KZ672289.1                            11866870  6 -  20541912 ------CAATAG
i Desmodus_rotundus.KZ672289.1                           C 0 I 21
s Dicerorhinus_sumatrensis.PEKH010002091.1                  666088  6 -   1390856 ------CAATAG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 21
s Diceros_bicornis.DicBicMic_scaffold_5955                  140888  6 -    198055 ------CAATAG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 21
s Dipodomys_ordii.KN672350.1                              18952456  2 -  37912305 ------G----G
i Dipodomys_ordii.KN672350.1                             C 0 I 19
s Dipodomys_stephensi.DipSte_scaffold_89095                   7367  2 -     10735 ------G----G
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 20
s Dolichotis_patagonum.DolPat_scaffold_80628                 11118  5 +     14636 ------GAA-GG
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 20
s Echinops_telfairi.JH980293.1                            62857049  6 - 111700974 ------CGGGAG
i Echinops_telfairi.JH980293.1                           C 0 I 21
s Eidolon_helvum.AWHC01266696.1                               7889  6 +     19438 ------CAGTAG
i Eidolon_helvum.AWHC01266696.1                          C 0 I 21
s Elaphurus_davidianus.JRFZ01104969.1                       241723  6 -    607251 ------CACTAA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 21
s Enhydra_lutris.KZ291758.1                               24917717  6 +  41312741 ------CAGTGA
i Enhydra_lutris.KZ291758.1                              C 0 I 21
s Eptesicus_fuscus.JH977646.1                             12580464  6 +  14770903 ------CAGTAG
i Eptesicus_fuscus.JH977646.1                            C 0 I 21
s Equus_asinus.JREZ01000139.1                              3043036  6 -   4378816 ------CCACAG
i Equus_asinus.JREZ01000139.1                            C 0 I 21
s Equus_caballus.CM000403.2                               21376975  6 +  39960074 ------CCACAG
i Equus_caballus.CM000403.2                              C 0 I 21
s Equus_przewalskii.KK951119.1                              412957  6 -    498745 ------CCACAG
i Equus_przewalskii.KK951119.1                           C 0 I 21
s Erinaceus_europaeus.JH835339.1                           3668024  6 +   7059049 ------AACTAG
i Erinaceus_europaeus.JH835339.1                         C 0 I 21
s Erythrocebus_patas.Contig38                               265414 12 +  21539334 agaggcctgtag
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72747  6 -    133382 ------CAATAA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 21
s Eubalaena_japonica.EubJap_flattened_line_57114               460  6 +     25849 ------CGATAA
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 I 21
s Eulemur_albifrons.k141_51491                               16725  6 -     24895 ------CAGGAG
i Eulemur_albifrons.k141_51491                           C 0 I 21
s Eulemur_collaris.k141_601111                               44434  6 -     70999 ------CAGGAG
i Eulemur_collaris.k141_601111                           C 0 I 21
s Eulemur_coronatus.k141_384460                              88405  6 +    112731 ------CAGGAG
i Eulemur_coronatus.k141_384460                          C 0 I 21
s Eulemur_flavifrons.k141_433119                             44968  6 +     68309 ------CAGGAG
i Eulemur_flavifrons.k141_433119                         C 0 I 21
s Eulemur_fulvus.k141_636316                                 55292  6 -     65740 ------CAGGAG
i Eulemur_fulvus.k141_636316                             C 0 I 21
s Eulemur_macaco.k141_1562045                                25924  6 -     75513 ------CAGGAG
i Eulemur_macaco.k141_1562045                            C 0 I 21
s Eulemur_mongoz.k141_232305                                 50119  6 -     97555 ------CAGGAG
i Eulemur_mongoz.k141_232305                             C 0 I 21
s Eulemur_rubriventer.k141_1423786                            6843  6 +     30972 ------CAGGAG
i Eulemur_rubriventer.k141_1423786                       C 0 I 21
s Eulemur_rufus.k141_514691                                  44562  6 -     52037 ------CAGGAG
i Eulemur_rufus.k141_514691                              C 0 I 21
s Eulemur_sanfordi.k141_1122526                              60953  6 -    111500 ------CAGGAG
i Eulemur_sanfordi.k141_1122526                          C 0 I 21
s Felis_catus.CM001381.2                                 186248422  6 - 206538554 ------CAGTAG
i Felis_catus.CM001381.2                                 C 0 I 21
s Felis_catus_fca126.CM031415.1                          185118208  6 - 205367284 ------CAGTAG
i Felis_catus_fca126.CM031415.1                          C 0 I 21
s Felis_nigripes.FelNig_flattened_line_31944                 29308  6 -     30238 ------CGGTAG
i Felis_nigripes.FelNig_flattened_line_31944             C 0 I 21
s Fukomys_damarensis.KN121974.1                            2924066  5 -   3816255 ------GAA-GG
i Fukomys_damarensis.KN121974.1                          C 0 I 19
s Galeopterus_variegatus.GalVar_scaffold_51812                3353  6 -     28519 ------CAGTAA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 I 21
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93441  6 -     95226 ------CAGTAA
i Giraffa_tippelskirchi.LVKQ01S015573.1                  C 0 I 21
s Glis_glis.GliGli_scaffold_163929                            3246  6 -      6791 ------GCATAG
i Glis_glis.GliGli_scaffold_163929                       C 0 I 20
s Gorilla_beringei.k141_3218903                                183 12 -      2763 agaggcctgaag
i Gorilla_beringei.k141_3218903                          n 36 C 0
s Gorilla_gorilla.LT578341.1                                258604 12 - 186649187 agaggcctgaag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    4313  6 -     78134 ------GCATAG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 20
s Hapalemur_alaotrensis.k141_330369                          16653  6 -     40692 ------CAGGAG
i Hapalemur_alaotrensis.k141_330369                      C 0 I 21
s Hapalemur_gilberti.k141_646465                             38052  6 +     49394 ------CAGGAG
i Hapalemur_gilberti.k141_646465                         C 0 I 21
s Hapalemur_griseus.k141_763500                              62923  6 -     66874 ------CAGGAG
i Hapalemur_griseus.k141_763500                          C 0 I 21
s Hapalemur_meridionalis.k141_258450                         11794  6 -     42923 ------CAGGAG
i Hapalemur_meridionalis.k141_258450                     C 0 I 21
s Hapalemur_occidentalis.k141_578367                         18796  6 -     53142 ------CAGGAG
i Hapalemur_occidentalis.k141_578367                     C 0 I 21
s Helogale_parvula.HelPar_flattened_line_2585                32399  6 -    327341 ------CAGTAG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 26
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 11106  6 +     48891 ------CAGTAA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 21
s Heterocephalus_glaber.JH602082.1                         1934453  5 -  22651954 ------GAA-GG
i Heterocephalus_glaber.JH602082.1                       C 0 I 20
s Heterohyrax_brucei.HetBruBak_scaffold_116546                1985  6 +      8654 ------CTGCAG
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 I 21
s Hippopotamus_amphibius.HipAmp_scaffold_38803                9248  6 -     36432 ------CAATAA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 12
s Hipposideros_armiger.JXIK01000431.1                      1553244  6 -   1711038 ------CAGTAG
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 21
s Hipposideros_galeritus.HipGal_scaffold_790761                150  6 +       338 ------CAGTAG
i Hipposideros_galeritus.HipGal_scaffold_790761          C 0 I 21
s Hoolock_leuconedys.ctg274                                    145072 12 -    630532 agaggcctaaag
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71759  6 +     83186 ------TGGTAG
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 21
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73704  4 +    143317 ------GAA-A-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 18
s Hylobates_agilis.k141_1155965                               8118 12 +     12352 agaggcctaaag
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15305 12 +     55766 agaggcctaaag
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054833 12 + 191637585 agaggcctaaag
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803711 12 +  11177569 agaggcctaaag
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9619  5 -    135385 ------GAA-AG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 20
s Ictidomys_tridecemlineatus.JH393364.1                     388801  6 +   7955117 ------GAGAGG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 20
s Indri_indri.k141_2415743                                    4332  6 +     11955 ------CAGTAG
i Indri_indri.k141_2415743                               C 0 I 21
s Inia_geoffrensis.IniGeo_flattened_line_69447               11642  6 -     16823 ------CAATAA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 21
s Jaculus_jaculus.JH725527.1                               1241632  2 +   9596543 ------GA----
i Jaculus_jaculus.JH725527.1                             C 0 I 19
s Kogia_breviceps.KogBre_flattened_line_3970                 73483  6 -     97402 ------CAATAA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 21
s Lasiurus_borealis.LasBor_scaffold_26245                    34019  6 -     49555 ------AAGTAG
i Lasiurus_borealis.LasBor_scaffold_26245                C 0 I 823
s Lemur_catta.scaffold_24                                 14761450  6 +  30322482 ------CAGGAG
i Lemur_catta.scaffold_24                                C 0 I 21
s Lepilemur_ankaranensis.k141_567626                         10958  6 +     29618 ------CAGTAG
i Lepilemur_ankaranensis.k141_567626                     C 0 I 21
s Lepilemur_dorsalis.k141_387009                             10964  6 +     31569 ------CAGTAG
i Lepilemur_dorsalis.k141_387009                         C 0 I 21
s Lepilemur_ruficaudatus.k141_330196                         10964  6 +     24756 ------CAGTAG
i Lepilemur_ruficaudatus.k141_330196                     C 0 I 21
s Lepilemur_septentrionalis.k141_360456                      10974  6 +     16388 ------CAGTAG
i Lepilemur_septentrionalis.k141_360456                  C 0 I 21
s Leptonychotes_weddellii.KB714746.1                        815104  6 -   3914936 ------CAGTGG
i Leptonychotes_weddellii.KB714746.1                     C 0 I 21
s Lepus_americanus.LepAme_scaffold_56121                     19866  6 +     24238 ------CAGTAG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 21
s Lipotes_vexillifer.KE559953.1                             342827  6 +    662738 ------CAATAA
i Lipotes_vexillifer.KE559953.1                          C 0 I 21
s Lophocebus_aterrimus.ctg367                               336349 12 -   1826925 agaggcctgtag
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086630  6 +  43346337 ------CAGCAG
i Loxodonta_africana.GL010049.1                          C 0 I 21
s Lycaon_pictus.CM007581.1                                41616138  6 +  59628241 ------CGGTAG
i Lycaon_pictus.CM007581.1                               C 0 I 21
s Macaca_arctoides.k141_1757516                              47741 12 -     61512 agaggcctgtag
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375403 12 -  60120075 agaggcctgtag
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27671 12 +     30207 agaggcctgtag
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2509 12 -      5035 agaggcctgtag
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27624 12 +     30527 agaggcctgtag
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38800 12 -     50087 agaggcctgtag
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48545 12 +     51645 agaggcctgtag
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417747 12 - 187317192 AGAGGCCTGTAG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401978 12 +  25927173 AGAGGCCTGTAG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51149 12 -     62418 agaggcctgtag
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3680 12 +     14901 agaggcctgtag
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47622 12 +     59329 agaggcctgtag
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273529 12 +    668171 agaggcctgtag
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2161 12 -      5049 agaggcctgtag
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5327 12 +     17132 agaggcctgtag
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224834  6 -    270270 ------CAGTAG
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 21
s Mandrillus_leucophaeus.scaffold280                        324817 12 +  24302211 agaggcctgtag
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359648 12 -    752769 agaggcctgtag
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675153  6 -    737560 ------CAGTAG
i Manis_javanica.JSZB01003497.1                          C 0 I 21
s Manis_pentadactyla.KN006162.1                             222453  6 +    317179 ------CAGTAG
i Manis_pentadactyla.KN006162.1                          C 0 I 21
s Marmota_marmota.CZRN01000018.1                           7503014  6 +  40650429 ------GAGAGG
i Marmota_marmota.CZRN01000018.1                         C 0 I 20
s Megaderma_lyra.MegLyr_scaffold_4542                       152174  6 +    207569 ------CAATAG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 21
s Mellivora_capensis.MelCap_flattened_line_19308             27867  6 -     74585 ------CAGTGA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 21
s Mesoplodon_bidens.MesBid_scaffold_6114                     89111  6 +     93471 ------CAATAA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 21
s Microcebus_murinus.CM007674.1                           74986774  6 +  93316391 ------CAGGAG
i Microcebus_murinus.CM007674.1                          C 0 I 21
s Microgale_talazaci.MicTal_scaffold_6613                    48252  6 +    145209 ------CAGTAG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 20
s Micronycteris_hirsuta.MicHir_scaffold_2233                186663  6 +    200668 ------CAATAG
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 21
s Miniopterus_natalensis.LDJU01000034.1                    6364805  6 -   8254450 ------CAGTAG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 21
s Miniopterus_schreibersii.MinSch_scaffold_23309             43729  6 -     48117 ------CAGTAG
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 21
s Miopithecus_ogouensis.k141_1534655                         24915 12 -     27822 agaggcctgtag
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        10115  6 +     27589 ------CAGTGG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 21
s Mirza_zaza.k141_766280                                     54556  6 -     62432 ------CAGTAG
i Mirza_zaza.k141_766280                                 C 0 I 21
s Monodon_monoceros.MonMon_M_scaffold_103                   361216  6 +    437263 ------CAATAA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 21
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180892  6 +    366855 ------CAACAG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 21
s Moschus_moschiferus.MosMos_scaffold_13123                  27551  3 -     82753 ------CA---A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 21
s Mungos_mungo.MunMun_flattened_line_18455                   20129  6 -     63510 ------CAGTAG
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 25
s Murina_feae.MurFea_scaffold_17764                          42762  6 +     47283 ------CAGTAG
i Murina_feae.MurFea_scaffold_17764                      C 0 I 21
s Muscardinus_avellanarius.MusAve_scaffold_5560               1322  6 -    124358 ------GCATGG
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 I 24
s Mustela_putorius.JH418006.1                             14356731  6 +  14710649 ------CAGTGA
i Mustela_putorius.JH418006.1                            C 0 I 21
s Myotis_brandtii.KE162005.1                               9795029  6 +  10118263 ------CAGTAG
i Myotis_brandtii.KE162005.1                             C 0 I 21
s Myotis_davidii.KB100139.1                                4389203  6 +   6019432 ------CAGTAG
i Myotis_davidii.KB100139.1                              C 0 I 21
s Myotis_lucifugus.GL429869.1                               385231  6 +   4330536 ------CAGTAG
i Myotis_lucifugus.GL429869.1                            C 0 I 21
s Myotis_myotis.MyoMyo_scaffold_66571                         4016  6 +     18357 ------CAGTAA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 21
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121344  6 +    130748 ------CAGCAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 414
s Nasalis_larvatus.k141_1350636                              31694 12 +     34575 agaggcctgtag
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233882  6 -   7148211 ------CAATAA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 21
s Noctilio_leporinus.NocLep_scaffold_7894                   129500  6 -    149072 ------CAGTAG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 21
s Nomascus_annamensis.k141_1771965                           56006 12 -    132029 agaggcctaaag
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12101 12 -     16345 agaggcctaaag
i Nomascus_concolor.k141_735679                          I 16 C 0
s Nomascus_gabriellae.k141_57920                             17990 12 +     22201 agaggcctaaag
i Nomascus_gabriellae.k141_57920                         I 16 C 0
s Nomascus_siki_b.tarseq_93                            8416220 12 -  22158432 agaggcctaaag
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28395 12 -     54323 agaggcctaaag
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199734  6 +   9404916 ------CAGTAG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 21
s Odobenus_rosmarus.KB229312.1                             1453532  6 +   2017862 ------CAGTGG
i Odobenus_rosmarus.KB229312.1                           C 0 I 21
s Odocoileus_virginianus.KZ100018.1                         438638  6 -    630418 ------CAGTAA
i Odocoileus_virginianus.KZ100018.1                      C 0 I 21
s Okapia_johnstoni.LVCL01S0005463.1                          16522  6 +    150152 ------CAGTAA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 21
s Orcinus_orca.KB316932.1                                  8104285  6 +  10937097 ------CAATAA
i Orcinus_orca.KB316932.1                                C 0 I 21
s Orycteropus_afer.OryAfe_flattened_line_201229               1508  6 +     11607 ------CAGTAG
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 I 29
s Oryctolagus_cuniculus.CM000791.1                       107106523  6 - 174332312 ------CAGTAG
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 20
s Otocyon_megalotis.JAEUCK010005147.1                        40780  6 +    559221 ------CAGTGG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 21
s Ovis_aries.CM001607.2                                   26406233  6 -  44047080 ------CAGCAA
i Ovis_aries.CM001607.2                                  C 0 I 21
s Ovis_canadensis.OviCan_scaffold_67953                       6752  6 +     17875 ------CAGTAA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 21
s Pan_paniscus.AJFE02004363.1                                    0 12 +      1263 AGAGGCCTGaag
i Pan_paniscus.AJFE02004363.1                            N 0 C 0
s Pan_troglodytes.CM009242.2                               1476587 12 - 189151597 agaggccTGAAG
i Pan_troglodytes.CM009242.2                             I 210 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   26131  6 -    230217 ------CGGTAG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 21
s Panthera_pardus.KV860321.1                              18463457  6 -  18783137 ------TGGTAG
i Panthera_pardus.KV860321.1                             C 0 I 21
s Panthera_tigris.KE722367.1                               3974116  6 +   8748460 ------CGGTAG
i Panthera_tigris.KE722367.1                             C 0 I 21
s Pantholops_hodgsonii.KE114653.1                          1617758  6 +   2937107 ------CAGTTA
i Pantholops_hodgsonii.KE114653.1                        C 0 I 21
s Papio_anubis.CM001495.2                                   245826 12 - 183742232 AGAGGCCTGTAG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12111 12 +     21308 agaggcctgtag
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294854 12 -  20919399 agaggcctgtag
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24751 12 -     27687 agaggcctgtag
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1430 12 +     10553 agaggcctgtag
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1390 12 -     10386 agaggcctgtag
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16711  6 +     78924 ------CGGTAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 21
s Perognathus_longimembris.PerPac_flattened_line_89005        3838  3 +      9367 ------GA---G
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 20
s Petromus_typicus.PetTyp_scaffold_17301                     33990  5 -     56120 ------GAA-GG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 20
s Phocoena_phocoena.PhoPho_flattened_line_24159               5810  6 -     63832 ------CAATAA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 21
s Piliocolobus_badius.k141_2704958                            5073 12 +     55023 agaggcctatag
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4595 12 -     89929 agaggcctatag
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5185 12 +     40849 agaggcctatag
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256915 12 +  14605196 AGAGGCCTATAG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5597  6 +     22231 ------CAGTGG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 13
s Platanista_gangetica.PlaMin_flattened_line_83166            2829  6 +     19503 ------CAATAA
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 21
s Pongo_abelii.CM009266.2                                   181766 12 - 189387572 agaggcCTGAAG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196509 12 -   9816681 agaggcctgaag
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30274 12 +     69807 agaggcctgtag
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47455 12 -     80239 agaggcctgtag
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 5976  6 +      7663 ------CTGCAG
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 21
s Prolemur_simus.MPIZ01000396.1                            1984598  6 +   4620579 ------CAGGAG
i Prolemur_simus.MPIZ01000396.1                          C 0 I 21
s Propithecus_coquerelli.NW_012148875.1                    1568084  6 -   2598838 ------CAGTAG
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 21
s Propithecus_coronatus.k141_209299                           5722  6 -      7103 ------CAGTAG
i Propithecus_coronatus.k141_209299                      C 0 I 21
s Propithecus_diadema.k141_153680                             6319  6 -     11706 ------CAGTAG
i Propithecus_diadema.k141_153680                        C 0 I 21
s Propithecus_edwardsi.k141_635656                           10056  6 -     30655 ------CAGTAG
i Propithecus_edwardsi.k141_635656                       C 0 I 21
s Propithecus_perrieri.k141_1496898                          36370  6 +     46564 ------CAGTAG
i Propithecus_perrieri.k141_1496898                      C 0 I 21
s Propithecus_tattersalli.k141_1127767                       96649  6 -     98465 ------CAGTAG
i Propithecus_tattersalli.k141_1127767                   C 0 I 21
s Propithecus_verreauxi.k141_1047036                         10288  6 +     35169 ------CAGTAG
i Propithecus_verreauxi.k141_1047036                     C 0 I 21
s Pteronotus_parnellii.KE847780.1                            53800  6 -     66298 ------CAATAG
i Pteronotus_parnellii.KE847780.1                        C 0 I 21
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6315  6 -     18639 ------CAGTGA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 21
s Pteropus_alecto.KB030862.1                               5842441  6 -  28871421 ------CAGTAG
i Pteropus_alecto.KB030862.1                             C 0 I 21
s Pteropus_vampyrus.KN525825.1                             3538956  6 -   4952924 ------CAGTAG
i Pteropus_vampyrus.KN525825.1                           C 0 I 21
s Puma_concolor.QAVW01001104.1                            18100771  6 +  38429054 ------CGGTAG
i Puma_concolor.QAVW01001104.1                           C 0 I 21
s Pygathrix_cinerea.k141_1153803                             29641 12 +     91421 agaggcctgtag
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156193 12 -   7812017 agaggcctgtag
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10498 12 +     72585 agaggcctgtag
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   682  6 -     55207 ------CAGTAA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 21
s Rhinolophus_sinicus.LVEH01000134.1                       2916396  6 +   3329780 ------CAGTTG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 21
s Rhinopithecus_bieti.k119_778604                             4103 12 +      7119 agaggcctgtag
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124773 12 + 195417433 AGAGGCCTGTAG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238945 12 -   7961872 agaggcctgtag
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76941  6 -    116970 ------CAATAG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 21
s Saiga_tatarica.SaiTat_scaffold_39512                        9915  6 +     16473 ------TAGTAA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 21
s Scalopus_aquaticus.ScaAqu_scaffold_662                    117246  6 +    313613 ------CAGTAG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 12
s Semnopithecus_entellus.k141_583282                          1080 12 +     11297 agaggcctgtag
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31473 12 +     58920 agaggcctgtag
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17971 12 -     45317 agaggcctgtag
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25629 12 -     42441 agaggcctgtag
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28305 12 -     29113 agaggcctgtag
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31382 12 -     48123 agaggcctgtag
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865750  5 -   1910179 ------CAG-GG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 21
s Sorex_araneus.JH798187.1                                 4672859  6 +  18376816 ------TAGTAG
i Sorex_araneus.JH798187.1                               C 0 I 21
s Spermophilus_dauricus.KZ294078.1                         1870365  6 +   3870691 ------GAGAGG
i Spermophilus_dauricus.KZ294078.1                       C 0 I 24
s Spilogale_gracilis.SpiGra_flattened_line_13525              8381  6 -     97271 ------CAGTGG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 21
s Suricata_suricatta.SurSur_flattened_line_6629             126549  6 +    196729 ------CAGTAG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 26
s Sus_scrofa.CM000828.4                                    6645597  6 +  69701581 ------CAACGA
i Sus_scrofa.CM000828.4                                  C 0 I 21
s Symphalangus_syndactylus.tarseq_199                       393477 12 +   1523678 agaggcctaaag
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15922  6 +     22964 ------CAGTAA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 21
s Tamandua_tetradactyla.TamTet_scaffold_224794                4347  6 +      5583 ------CAGCAG
i Tamandua_tetradactyla.TamTet_scaffold_224794           C 0 I 410
s Tapirus_indicus.TapInd_scaffold_7432                      193283  6 +    199430 ------CCATGG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 21
s Tapirus_terrestris.TapTer_scaffold_755                    107251  6 -    539355 ------CCATGG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 21
s Tarsius_lariang.k141_1733899                                2619  6 +      9917 ------TAGTGG
i Tarsius_lariang.k141_1733899                           C 0 I 21
s Tarsius_wallacei.k141_226975                                9418  6 +     20590 ------TAGTGG
i Tarsius_wallacei.k141_226975                           C 0 I 21
s Theropithecus_gelada.CM009954.1                           355635 12 - 186847797 AGAGGCCTGTAG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26205  5 -     33621 ------GAA-GG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 20
s Tolypeutes_matacus.TolMat_scaffold_31955                   21281  6 -     31044 ------CAGTAG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 21
s Tonatia_saurophila.TonSau_scaffold_294                    481792  6 -    610378 ------CAGTAG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 21
s Trachypithecus_auratus.k141_1189070                        23381 12 +     26378 agaggcctgtag
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36180 12 -     78344 agaggcctgtag
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22706 12 +     25722 agaggcctgtag
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31136 12 -     62838 agaggcctgtag
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31127 12 +     46913 agaggcctgtag
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11864 12 -     28527 agaggcctgtag
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33071 12 -     64340 agaggcctgtag
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31109 12 -     63452 agaggcctgtag
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12556 12 +     22490 agaggcctgtag
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          522 12 +      9911 agaggcctgtag
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          317 12 -     33539 agaggcctgtag
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258076 12 -   6242583 agaggcctgtag
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4095 12 +     19340 agaggcctgtag
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175531  6 -    200418 ------CAGTAA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 21
s Trichechus_manatus.JH594705.1                            6483312  6 -  10818551 ------CAGCGG
i Trichechus_manatus.JH594705.1                          C 0 I 21
s Tupaia_chinensis.KB320699.1                              1837329  6 -   4065304 ------CAGTAG
i Tupaia_chinensis.KB320699.1                            C 0 I 16
s Tupaia_tana.TupTan_flattened_line_394                      11380  6 -     70247 ------CAGTAG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 16
s Tursiops_truncatus.MRVK01000835.1                       17367410  6 -  33153633 ------CAATAA
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 21
s Uropsilus_gracilis.UroGra_scaffold_46687                    5210  6 -     21056 ------CAGTAG
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 21
s Ursus_maritimus.KK499267.1                                183745  6 +   5085361 ------CAGTGG
i Ursus_maritimus.KK499267.1                             C 0 I 21
s Varecia_rubra.k141_787544                                  27248  6 -     30710 ------CAGGAG
i Varecia_rubra.k141_787544                              C 0 I 21
s Varecia_variegata.k141_289850                              26155  6 -    147434 ------CAGGAG
i Varecia_variegata.k141_289850                          C 0 I 21
s Vicugna_pacos.KN270157.1                                   77939  6 +   5488506 ------CAATAA
i Vicugna_pacos.KN270157.1                               C 0 I 21
s Vulpes_lagopus.VulLag_flattened_line_12041                106668  6 -    112863 ------CGGTAG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 21
s Xerus_inauris.XerIna_scaffold_2302                        176100  6 -    224448 ------GAGAAA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 20
s Zalophus_californianus.ZalCal_flattened_line_17732         30744  6 -     86975 ------CAGTGG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 21
s Zapus_hudsonius.ZapHud_scaffold_286923                      1514  5 -      1899 ------GAGGA-
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 I 19
e Myocastor_coypus.MyoCoy_scaffold_15261                     65008 2086 +     67721 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Capromys_pilorides.CapPil_scaffold_762519                   1425 14 -      1607 I
e Chinchilla_lanigera.JH722012.1                           1240651 14 -   2543920 I
e Nannospalax_galili.KL204047.1                             948241 19 +   3037898 I
e Saimiri_ustus.k141_360372                                  31938  0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16784  0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29383  0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32692  0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       32306  0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110739  0 + 121099817 C
e Octodon_degus.JH651603.1                                11057105 14 -  11899542 I
e Dinomys_branickii.DinBra_scaffold_10381                   100725 14 -    115145 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  20495 14 +     50838 I
e Elephantulus_edwardii.JH947257.1                         1227257 63261 +  10337057 T
e Callibella_humilis.k141_1233062                            11864  0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    51606 19 +     77746 I
e Sapajus_macrocephalus.k141_796559                           9558  0 +     21866 C
e Sapajus_apella.ctg103                                     239968  0 +   5703754 C
e Saguinus_oedipus.k141_1368863                                616  0 +     10417 C
e Saguinus_mystax.k141_6319370                                1276  0 +     10149 C
e Saguinus_midas.LG03                                       394567  0 - 209938924 C
e Saguinus_labiatus.k141_264497                               3661  0 -      7443 C
e Saguinus_inustus.k141_4502137                                856  0 +      4564 C
e Saguinus_imperator.k141_2710097                            15976  0 -     24931 C
e Saguinus_geoffroyi.k141_356064                               373  0 +      9876 C
e Saguinus_bicolor.k141_161125                                8912  0 +     12412 C
e Rattus_norvegicus.chr16                                 37024781 19 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            39881 19 +     52041 I
e Plecturocebus_moloch.k141_1031110                          45651  0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          44184  0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      16258  0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          9331  0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          44283  0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          9332  0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44634  0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       44240  0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4836  0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9754  0 +     39866 C
e Pithecia_vanzolinii.k141_1369553                           33337  0 +     51125 C
e Pithecia_pithecia.tarseq_165                              558323  0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33353  0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33593  0 +     63561 C
e Pithecia_hirsuta.k141_640380                               33317  0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7569  0 -     25401 C
e Pithecia_albicans.k141_1239476                             66481  0 +    207309 C
e Peromyscus_maniculatus.KI615324.1                         249823 19 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6617 19 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    96039 18 -    140218 I
e Mus_spretus.CM004101.1                                  39499056 19 + 130317789 I
e Mus_pahari.LT608297.1                                   58218083 19 +  89631738 I
e Mus_musculus.chr8                                       41690137 19 + 129401213 I
e Mus_caroli.LT608237.1                                   35596598 19 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15965421 18 +  27267610 I
e Mico_schneideri.k141_1877700                                     20782  0 -     26561 C
e Mico_humeralifer.k141_1180625                              12463  0 -     12984 C
e Mico_argentatus.k141_582562                                11963  0 +     17804 C
e Mesocricetus_auratus.KB708134.1                         17431709  5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52344 19 -    140813 I
e Leontopithecus_rosalia.k141_1583055                         5369  0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      567  0 +      8855 C
e Leontocebus_nigricollis.k141_1320036                         377  0 +      3713 C
e Leontocebus_illigeri.k141_2759473                            734  0 -     14280 C
e Leontocebus_fuscicollis.k141_3470480                         421  0 -     23187 C
e Lagothrix_lagothricha.k141_246028                          44940  0 +    110728 C
e Ellobius_talpinus.LOJH01026522.1                           15931 18 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          33995 18 +    110024 I
e Cricetulus_griseus.LT883664.1                          213118118 19 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 46355  7 -     83289 I
e Chiropotes_sagulatus.k141_1113111                           9664  0 +     34062 C
e Chiropotes_israelita.k141_313004                           44113  0 -    112038 C
e Chiropotes_albinasus.k141_1091259                          33016  0 -     52013 C
e Cheracebus_torquatus.k141_890198                           21042  0 +     39636 C
e Cheracebus_regulus.k141_471822                             21253  0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20998  0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10585  0 -     32913 C
e Cebus_unicolor.k141_1654760                                68744  0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9648  0 -     34880 C
e Cebus_albifrons.Contig27                                  374591  0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44838  0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6780  0 -     12580 C
e Callithrix_kuhlii.k119_102356                               3381  0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455859  0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3470  0 -      8861 C
e Callimico_goeldii.k141_1609886                             11377  0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         22212  0 +    119600 C
e Cacajao_hosomi.k141_81245                                  22299  0 +     95584 C
e Cacajao_calvus.k141_89051                                  44773  0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9479  0 +     28062 C
e Ateles_paniscus.k141_866194                                24673  0 -     33135 C
e Ateles_marginatus.k141_970259                              50615  0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              35246  0 +     44353 C
e Ateles_chamek.k141_615173                                   7690  0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12555  0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276389  0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      25938  7 -     32367 I
e Aotus_vociferans.k141_1514463                               3326  0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3767  0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673773  0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3491  0 -     15923 C
e Aotus_azarae.k141_887050                                    2866  0 +     17741 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I
e Alouatta_seniculus.k141_928287                             34633  0 +     42133 C
e Alouatta_puruensis.k141_251022                             10499  0 +     30854 C
e Alouatta_palliata.k141_638677                              48326  0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42677  0 +     45454 C
e Alouatta_macconnelli.k141_1277969                           1160  0 -      3959 C
e Alouatta_juara.k141_1687208                                44052  0 -     64179 C
e Alouatta_discolor.k141_2561099                             45595  0 +     55831 C
e Alouatta_caraya.k141_1109140                               46162  0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73924  0 -     84148 C
e Acomys_cahirinus.AcoCah_scaffold_21377                     27785 29 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9444 4 +     36723 gtcc
s Allenopithecus_nigroviridis.k141_3755588                   50396 4 +     53615 gtcc
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2423 4 +     13857 gtcc
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18978 4 -     21945 gtcc
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20663 4 +     32033 gtcc
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Avahi_laniger.k141_2756659                                  8217 1 +     11645 A---
i Avahi_laniger.k141_2756659                             I 21 N 0
s Avahi_peyrierasi.k141_1823318                               8225 1 -     19611 A---
i Avahi_peyrierasi.k141_1823318                          I 21 N 0
s Cercocebus_atys.KQ010504.1                                143479 4 -   4669795 GTCC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47218 4 +     47900 gtcc
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2651 4 -     14410 gtcc
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47033 4 -    148725 gtcc
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29311 4 -     40656 gtcc
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9270 4 +     20796 gtcc
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14384 4 -     17524 gtcc
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30116 4 -     34525 gtcc
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13896 4 -     25376 gtcc
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366483 4 -  39242232 gtcc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272210 4 +  21565898 gtcc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34575 4 -     45857 gtcc
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29476 4 -     32606 gtcc
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5639 4 +      8499 gtcc
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28038 4 +     70610 gtcc
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         24998 4 +     36323 gtcc
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheirogaleus_major.k141_666340                             32610 1 -     33796 A---
i Cheirogaleus_major.k141_666340                         I 21 N 0
s Cheirogaleus_medius.k141_759766                             7113 1 -     15404 A---
i Cheirogaleus_medius.k141_759766                        I 21 N 0
s Chlorocebus_aethiops.ctg25                                345898 4 +  18827391 gtcc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12437 4 -     44032 gtcc
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307284 4 - 135778131 GTCC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411697 4 -   2368649 GTCC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381579 4 - 200372422 gtcc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5136 4 -     84244 gtcc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Daubentonia_madagascariensis.ctg71                        294532 1 +  12879189 A---
i Daubentonia_madagascariensis.ctg71                     I 21 N 0
s Erythrocebus_patas.Contig38                               265426 4 +  21539334 gtcc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eulemur_albifrons.k141_51491                               16752 1 -     24895 A---
i Eulemur_albifrons.k141_51491                           I 21 N 0
s Eulemur_collaris.k141_601111                               44461 1 -     70999 A---
i Eulemur_collaris.k141_601111                           I 21 N 0
s Eulemur_coronatus.k141_384460                              88432 1 +    112731 A---
i Eulemur_coronatus.k141_384460                          I 21 N 0
s Eulemur_flavifrons.k141_433119                             44995 1 +     68309 A---
i Eulemur_flavifrons.k141_433119                         I 21 N 0
s Eulemur_fulvus.k141_636316                                 55319 1 -     65740 A---
i Eulemur_fulvus.k141_636316                             I 21 N 0
s Eulemur_macaco.k141_1562045                                25951 1 -     75513 A---
i Eulemur_macaco.k141_1562045                            I 21 N 0
s Eulemur_mongoz.k141_232305                                 50146 1 -     97555 A---
i Eulemur_mongoz.k141_232305                             I 21 N 0
s Eulemur_rubriventer.k141_1423786                            6870 1 +     30972 A---
i Eulemur_rubriventer.k141_1423786                       I 21 N 0
s Eulemur_rufus.k141_514691                                  44589 1 -     52037 A---
i Eulemur_rufus.k141_514691                              I 21 N 0
s Eulemur_sanfordi.k141_1122526                              60980 1 -    111500 A---
i Eulemur_sanfordi.k141_1122526                          I 21 N 0
s Gorilla_beringei.k141_3218903                                195 4 -      2763 gtcc
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                258616 4 - 186649187 gtcc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hapalemur_alaotrensis.k141_330369                          16680 1 -     40692 A---
i Hapalemur_alaotrensis.k141_330369                      I 21 N 0
s Hapalemur_gilberti.k141_646465                             38079 1 +     49394 A---
i Hapalemur_gilberti.k141_646465                         I 21 N 0
s Hapalemur_griseus.k141_763500                              62950 1 -     66874 A---
i Hapalemur_griseus.k141_763500                          I 21 N 0
s Hapalemur_meridionalis.k141_258450                         11821 1 -     42923 A---
i Hapalemur_meridionalis.k141_258450                     I 21 N 0
s Hapalemur_occidentalis.k141_578367                         18823 1 -     53142 A---
i Hapalemur_occidentalis.k141_578367                     I 21 N 0
s Hoolock_leuconedys.ctg274                                    145084 4 -    630532 gtct
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               8130 4 +     12352 gtct
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15317 4 +     55766 gtct
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054845 4 + 191637585 gtct
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803723 4 +  11177569 gtct
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Indri_indri.k141_2415743                                    4359 1 +     11955 A---
i Indri_indri.k141_2415743                               I 21 N 0
s Lemur_catta.scaffold_24                                 14761477 1 +  30322482 A---
i Lemur_catta.scaffold_24                                I 21 N 0
s Lepilemur_ankaranensis.k141_567626                         10985 1 +     29618 A---
i Lepilemur_ankaranensis.k141_567626                     I 21 N 0
s Lepilemur_dorsalis.k141_387009                             10991 1 +     31569 A---
i Lepilemur_dorsalis.k141_387009                         I 21 N 0
s Lepilemur_ruficaudatus.k141_330196                         10991 1 +     24756 A---
i Lepilemur_ruficaudatus.k141_330196                     I 21 N 0
s Lepilemur_septentrionalis.k141_360456                      11001 1 +     16388 A---
i Lepilemur_septentrionalis.k141_360456                  I 21 N 0
s Lophocebus_aterrimus.ctg367                               336361 4 -   1826925 gtcc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47753 4 -     61512 gtcc
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375415 4 -  60120075 gtcc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27683 4 +     30207 gtcc
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2521 4 -      5035 gtcc
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27636 4 +     30527 gtcc
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38812 4 -     50087 gtcc
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48557 4 +     51645 gtcc
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417759 4 - 187317192 GTCC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401990 4 +  25927173 GTCC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51161 4 -     62418 gtcc
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3692 4 +     14901 gtcc
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47634 4 +     59329 gtcc
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273541 4 +    668171 gtcc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2173 4 -      5049 gtcc
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5339 4 +     17132 gtcc
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324829 4 +  24302211 gtcc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359660 4 -    752769 gtcc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Microcebus_murinus.CM007674.1                           74986801 1 +  93316391 A---
i Microcebus_murinus.CM007674.1                          I 21 N 0
s Miopithecus_ogouensis.k141_1534655                         24927 4 -     27822 gtcc
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirza_zaza.k141_766280                                     54583 1 -     62432 A---
i Mirza_zaza.k141_766280                                 I 21 N 0
s Nasalis_larvatus.k141_1350636                              31706 4 +     34575 gtcc
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           56018 4 -    132029 gtct
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12113 4 -     16345 gtct
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18002 4 +     22201 gtct
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416232 4 -  22158432 gtct
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28407 4 -     54323 gtct
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_paniscus.AJFE02004363.1                                   12 4 +      1263 gtcc
i Pan_paniscus.AJFE02004363.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1476599 4 - 189151597 GTCC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   245838 4 - 183742232 GTCC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12123 4 +     21308 gtcc
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294866 4 -  20919399 gtcc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24763 4 -     27687 gtcc
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1442 4 +     10553 gtcc
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1402 4 -     10386 gtcc
i Papio_ursinus.k141_5784434                             C 0 C 0
s Piliocolobus_badius.k141_2704958                            5085 3 +     55023 gtc-
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4607 3 -     89929 gtc-
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5197 3 +     40849 gtc-
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256927 3 +  14605196 GTC-
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pongo_abelii.CM009266.2                                   181778 4 - 189387572 GTCC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196521 4 -   9816681 gtcc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30286 4 +     69807 gtcc
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47467 4 -     80239 gtcc
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            1984625 1 +   4620579 a---
i Prolemur_simus.MPIZ01000396.1                          I 21 N 0
s Propithecus_coquerelli.NW_012148875.1                    1568111 1 -   2598838 a---
i Propithecus_coquerelli.NW_012148875.1                  I 21 N 0
s Propithecus_coronatus.k141_209299                           5749 1 -      7103 A---
i Propithecus_coronatus.k141_209299                      I 21 N 0
s Propithecus_diadema.k141_153680                             6346 1 -     11706 A---
i Propithecus_diadema.k141_153680                        I 21 N 0
s Propithecus_edwardsi.k141_635656                           10083 1 -     30655 A---
i Propithecus_edwardsi.k141_635656                       I 21 N 0
s Propithecus_perrieri.k141_1496898                          36397 1 +     46564 A---
i Propithecus_perrieri.k141_1496898                      I 21 N 0
s Propithecus_tattersalli.k141_1127767                       96676 1 -     98465 A---
i Propithecus_tattersalli.k141_1127767                   I 21 N 0
s Propithecus_verreauxi.k141_1047036                         10315 1 +     35169 A---
i Propithecus_verreauxi.k141_1047036                     I 21 N 0
s Pygathrix_cinerea.k141_1153803                             29653 4 +     91421 gtcc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156205 4 -   7812017 gtcc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10510 4 +     72585 gtcc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4115 4 +      7119 gtcc
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124785 4 + 195417433 GTCC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238957 4 -   7961872 gtcc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Semnopithecus_entellus.k141_583282                          1092 4 +     11297 gtcc
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31485 4 +     58920 gtcc
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17983 4 -     45317 gtcc
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25641 4 -     42441 gtcc
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28317 4 -     29113 gtcc
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31394 4 -     48123 gtcc
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393489 4 +   1523678 gtct
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                           355647 4 - 186847797 GTCC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23393 4 +     26378 gtcc
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36192 4 -     78344 gtcc
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22718 4 +     25722 gtcc
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31148 4 -     62838 gtcc
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31139 4 +     46913 gtcc
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11876 4 -     28527 gtcc
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33083 4 -     64340 gtcc
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31121 4 -     63452 gtcc
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12568 4 +     22490 gtcc
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          534 4 +      9911 gtcc
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          329 4 -     33539 gtcc
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258088 4 -   6242583 gtcc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4107 4 +     19340 gtcc
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Varecia_rubra.k141_787544                                  27275 1 -     30710 A---
i Varecia_rubra.k141_787544                              I 21 N 0
s Varecia_variegata.k141_289850                              26182 1 -    147434 A---
i Varecia_variegata.k141_289850                          I 21 N 0
e Fukomys_damarensis.KN121974.1                            2924071 19 -   3816255 I
e Myocastor_coypus.MyoCoy_scaffold_15261                     65008 2086 +     67721 I
e Sorex_araneus.JH798187.1                                 4672865 21 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3668030 21 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Capromys_pilorides.CapPil_scaffold_762519                   1425 14 -      1607 I
e Chinchilla_lanigera.JH722012.1                           1240651 14 -   2543920 I
e Nannospalax_galili.KL204047.1                             948241 19 +   3037898 I
e Saimiri_ustus.k141_360372                                  31938 0 -     47109 C
e Saimiri_sciureus.k141_1467173                              16784 0 -     22428 C
e Saimiri_oerstedii.k141_245838                              29383 0 -     34454 C
e Saimiri_macrodon.k141_1173117                              32692 0 -     79414 C
e Saimiri_cassiquiarensis.k141_1467335                       32306 0 -     47369 C
e Saimiri_boliviensis.NW_024100920.1                       1110739 0 + 121099817 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            30037 20 +     75252 I
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                261 34 -      4087 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              26210 20 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     33995 20 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005        3841 20 +      9367 I
e Octodon_degus.JH651603.1                                11057105 14 -  11899542 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73708 18 +    143317 I
e Heterocephalus_glaber.JH602082.1                         1934458 20 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                 11123 20 +     14636 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   7369 20 -     10735 I
e Dipodomys_ordii.KN672350.1                              18952458 19 -  37912305 I
e Dinomys_branickii.DinBra_scaffold_10381                   100725 14 -    115145 I
e Cuniculus_paca.CunPac_flattened_line_7025                   9027 20 +     36344 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  20495 14 +     50838 I
e Cavia_tschudii.CavTsc_scaffold_23560                       64826 20 -     66877 I
e Cavia_porcellus.DS562891.1                               5001747 20 +  23407841 I
e Cavia_aperea.AVPZ01000300.1                              4998305 20 +  23392119 I
e Microgale_talazaci.MicTal_scaffold_6613                    48258 20 +    145209 I
e Echinops_telfairi.JH980293.1                            62857055 21 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1514 29 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227257 63261 +  10337057 T
e Desmodus_rotundus.KZ672289.1                            11866876 21 -  20541912 I
e Callibella_humilis.k141_1233062                            11864 0 +     18648 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607859 480 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  383 480 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21287 21 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111566 21 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            14193 21 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19872 21 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1889 21 +      9923 I
e Tupaia_tana.TupTan_flattened_line_394                      11386 16 -     70247 I
e Tupaia_chinensis.KB320699.1                              1837335 16 -   4065304 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30750 21 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106674 21 -    112863 I
e Ursus_maritimus.KK499267.1                                183751 21 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8387 21 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6321 21 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40786 21 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453538 21 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199740 21 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356737 21 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046        10121 21 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27873 21 -     74585 I
e Lycaon_pictus.CM007581.1                                41616144 21 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        815110 21 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917723 21 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108570 21 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616989 21 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223854 21 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10511 21 -     23171 I
e CanFam4.chr16                                           42506875 21 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  7019 21 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217307 21 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20417187 21 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1519 19 -      1899 I
e Xerus_inauris.XerIna_scaffold_2302                        176106 20 -    224448 I
e Vicugna_pacos.KN270157.1                                   77945 21 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    5216 21 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367416 21 -  33153633 I
e Trichechus_manatus.JH594705.1                            6483318 21 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175537 21 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481798 21 -    610378 I
e Tarsius_wallacei.k141_226975                                9424 21 +     20590 I
e Tarsius_lariang.k141_1733899                                2625 21 +      9917 I
e Tapirus_terrestris.TapTer_scaffold_755                    107257 21 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193289 21 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4353 410 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15928 21 +     22964 I
e Sus_scrofa.CM000828.4                                    6645603 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126555 26 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1870371 24 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865755 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51606 19 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117252 12 +    313613 I
e Sapajus_macrocephalus.k141_796559                           9558 0 +     21866 C
e Sapajus_apella.ctg103                                     239968 0 +   5703754 C
e Saiga_tatarica.SaiTat_scaffold_39512                        9921 21 +     16473 I
e Saguinus_oedipus.k141_1368863                                616 0 +     10417 C
e Saguinus_mystax.k141_6319370                                1276 0 +     10149 C
e Saguinus_midas.LG03                                       394567 0 - 209938924 C
e Saguinus_labiatus.k141_264497                               3661 0 -      7443 C
e Saguinus_inustus.k141_4502137                                856 0 +      4564 C
e Saguinus_imperator.k141_2710097                            15976 0 -     24931 C
e Saguinus_geoffroyi.k141_356064                               373 0 +      9876 C
e Saguinus_bicolor.k141_161125                                8912 0 +     12412 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76947 21 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916402 21 +   3329780 I
e Rattus_norvegicus.chr16                                 37024781 19 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                   688 21 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100777 21 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538962 21 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842447 21 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53806 21 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39881 19 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_165387                 5982 21 +      7663 I
e Plecturocebus_moloch.k141_1031110                          45651 0 +     89403 C
e Plecturocebus_miltoni.k141_349282                          44184 0 -     90634 C
e Plecturocebus_hoffmannsi.k141_3303950                      16258 0 -     67232 C
e Plecturocebus_grovesi.k141_2013005                          9331 0 -     60166 C
e Plecturocebus_dubius.k141_1058799                          44283 0 +     87928 C
e Plecturocebus_cupreus.k141_2351393                          9332 0 -     39403 C
e Plecturocebus_cinerascens.k141_1164729                     44634 0 -     88961 C
e Plecturocebus_caligatus.k141_1382851                       44240 0 -     87950 C
e Plecturocebus_brunneus.k141_862875                          4836 0 -      9282 C
e Plecturocebus_bernhardi.k141_2549090                        9754 0 +     39866 C
e Platanista_gangetica.PlaMin_flattened_line_83166            2835 21 +     19503 I
e Pithecia_vanzolinii.k141_1369553                           33337 0 +     51125 C
e Pithecia_pithecia.tarseq_165                              558323 0 -   4542175 C
e Pithecia_pissinattii.k141_878371                           33353 0 +     51148 C
e Pithecia_mittermeieri.k141_1280039                         33593 0 +     63561 C
e Pithecia_hirsuta.k141_640380                               33317 0 +     58159 C
e Pithecia_chrysocephala.k141_785207                          7569 0 -     25401 C
e Pithecia_albicans.k141_1239476                             66481 0 +    207309 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5603 13 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5816 21 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249823 19 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16717 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617764 21 +   2937107 I
e Panthera_tigris.KE722367.1                               3974122 21 +   8748460 I
e Panthera_pardus.KV860321.1                              18463463 21 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   26137 21 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6758 21 +     17875 I
e Ovis_aries.CM001607.2                                   26406239 21 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107106529 20 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104291 21 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6617 19 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    96039 18 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          16528 21 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438644 21 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129506 21 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233888 21 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121350 414 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         4022 21 +     18357 I
e Myotis_lucifugus.GL429869.1                               385237 21 +   4330536 I
e Myotis_davidii.KB100139.1                                4389209 21 +   6019432 I
e Myotis_brandtii.KE162005.1                               9795035 21 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_5560               1328 24 -    124358 I
e Mus_spretus.CM004101.1                                  39499056 19 + 130317789 I
e Mus_pahari.LT608297.1                                   58218083 19 +  89631738 I
e Mus_musculus.chr8                                       41690137 19 + 129401213 I
e Mus_caroli.LT608237.1                                   35596598 19 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          42768 21 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   20135 25 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27554 21 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180898 21 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   361222 21 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43735 21 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364811 21 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965421 18 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                186669 21 +    200668 I
e Mico_schneideri.k141_1877700                                     20782 0 -     26561 C
e Mico_humeralifer.k141_1180625                              12463 0 -     12984 C
e Mico_argentatus.k141_582562                                11963 0 +     17804 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     89117 21 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52344 19 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       152180 21 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7503020 20 +  40650429 I
e Manis_pentadactyla.KN006162.1                             222459 21 +    317179 I
e Manis_javanica.JSZB01003497.1                             675159 21 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224840 21 -    270270 I
e Loxodonta_africana.GL010049.1                           39086636 21 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342833 21 +    662738 I
e Leontopithecus_rosalia.k141_1583055                         5369 0 -     13645 C
e Leontopithecus_chrysomelas.k141_3286424                      567 0 +      8855 C
e Leontocebus_nigricollis.k141_1320036                         377 0 +      3713 C
e Leontocebus_illigeri.k141_2759473                            734 0 -     14280 C
e Leontocebus_fuscicollis.k141_3470480                         421 0 -     23187 C
e Lasiurus_borealis.LasBor_scaffold_26245                    34025 823 -     49555 I
e Lagothrix_lagothricha.k141_246028                          44940 0 +    110728 C
e Kogia_breviceps.KogBre_flattened_line_3970                 73489 21 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241634 19 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447               11648 21 -     16823 I
e Ictidomys_tridecemlineatus.JH393364.1                     388807 20 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       9624 20 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71765 21 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_790761                156 21 +       338 I
e Hipposideros_armiger.JXIK01000431.1                      1553250 21 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9254 12 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1991 21 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 11112 21 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32405 26 -    327341 I
e Graphiurus_murinus.GraMur_scaffold_10447                    4319 20 -     78134 I
e Glis_glis.GliGli_scaffold_163929                            3252 20 -      6791 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93447 21 -     95226 I
e Galeopterus_variegatus.GalVar_scaffold_51812                3359 21 -     28519 I
e Felis_nigripes.FelNig_flattened_line_31944                 29314 21 -     30238 I
e Felis_catus_fca126.CM031415.1                          185118214 21 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               466 21 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72753 21 -    133382 I
e Equus_przewalskii.KK951119.1                              412963 21 -    498745 I
e Equus_caballus.CM000403.2                               21376981 21 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3043042 21 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580470 21 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15931 18 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          33995 18 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       241729 21 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7895 21 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140894 21 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  666094 21 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633545 21 -  35494412 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    647321 21 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5972 22 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118118 19 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 46355 7 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4585 21 -      8242 I
e Condylura_cristata.JH655891.1                           35808549 21 +  53390261 I
e Chiropotes_sagulatus.k141_1113111                           9664 0 +     34062 C
e Chiropotes_israelita.k141_313004                           44113 0 -    112038 C
e Chiropotes_albinasus.k141_1091259                          33016 0 -     52013 C
e Cheracebus_torquatus.k141_890198                           21042 0 +     39636 C
e Cheracebus_regulus.k141_471822                             21253 0 +    216457 C
e Cheracebus_lugens.k141_1179667                             20998 0 -     40346 C
e Cheracebus_lucifer.k141_2312002                            10585 0 -     32913 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20655 21 +     27315 I
e Cephalopachus_bancanus.k141_1689090                         4697 21 -      5494 I
e Cebus_unicolor.k141_1654760                                68744 0 -     89041 C
e Cebus_olivaceus.k141_1404781                                9648 0 -     34880 C
e Cebus_albifrons.Contig27                                  374591 0 -  26074798 C
e Cebuella_pygmaea.k141_145798                               44838 0 +     53515 C
e Cebuella_niveiventris.k141_592277                           6780 0 -     12580 C
e Catagonus_wagneri.CatWag_scaffold_2839                     81202 21 -    217609 I
e Castor_canadensis.CasCan_scaffold_39952                    29624 14 -     39886 I
e Carlito_syrichta.NW_007259797.1                           272738 21 +    496798 I
e Capra_hircus.CM004588.1                                 26593375 21 +  44709034 I
e Capra_aegagrus.CM003241.1                               27411099 223 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210554 21 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666896 21 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632609 21 +  17673402 I
e Callithrix_kuhlii.k119_102356                               3381 0 +      8664 C
e Callithrix_jacchus.pat_scaffold_3                      165455859 0 + 189096842 C
e Callithrix_geoffroyi.k119_459277                            3470 0 -      8861 C
e Callimico_goeldii.k141_1609886                             11377 0 -     13885 C
e Cacajao_melanocephalus.k141_619699                         22212 0 +    119600 C
e Cacajao_hosomi.k141_81245                                  22299 0 +     95584 C
e Cacajao_calvus.k141_89051                                  44773 0 -     91139 C
e Cacajao_ayresi.k141_96119                                   9479 0 +     28062 C
e Bubalus_bubalis.KI419123.1                               1532012 21 -   4408762 I
e Bos_taurus.CM000203.6                                   27547004 21 -  45695690 I
e Bos_mutus.JH880303.1                                      756862 21 +   1948126 I
e Bos_indicus.CM003047.1                                  20358298 21 +  48749331 I
e Bison_bison.KN261452.1                                     23908 21 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88379 21 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1639 21 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7965139 21 -  23207421 I
e Ateles_paniscus.k141_866194                                24673 0 -     33135 C
e Ateles_marginatus.k141_970259                              50615 0 -     71267 C
e Ateles_geoffroyi_a.k141_1283730                              35246 0 +     44353 C
e Ateles_chamek.k141_615173                                   7690 0 -     28759 C
e Ateles_belzebuth.k141_1572163                              12555 0 +     48076 C
e Ateles_geoffroyi_b.tarseq_1536                               276389 0 +  21539123 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      25938 7 -     32367 I
e Aotus_vociferans.k141_1514463                               3326 0 -     17186 C
e Aotus_trivirgatus.k141_318729                               3767 0 -     16391 C
e Aotus_nancymaae.KZ198451.1                                673773 0 +   5030052 C
e Aotus_griseimembra.k141_3192254                             3491 0 -     15923 C
e Aotus_azarae.k141_887050                                    2866 0 +     17741 C
e Antilocapra_americana.AntAmePen_scaffold_21030             52449 21 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536 2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587372 21 +   2318259 I
e Alouatta_seniculus.k141_928287                             34633 0 +     42133 C
e Alouatta_puruensis.k141_251022                             10499 0 +     30854 C
e Alouatta_palliata.k141_638677                              48326 0 +     70886 C
e Alouatta_nigerrima.k141_376068                             42677 0 +     45454 C
e Alouatta_macconnelli.k141_1277969                           1160 0 -      3959 C
e Alouatta_juara.k141_1687208                                44052 0 -     64179 C
e Alouatta_discolor.k141_2561099                             45595 0 +     55831 C
e Alouatta_caraya.k141_1109140                               46162 0 -     78289 C
e Alouatta_belzebul.k141_1011583                             73924 0 -     84148 C
e Allactaga_bullata.AllBul_scaffold_20030                    20085 19 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     27785 29 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           814518 21 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9448 5 +     36723 tttcc
s Allenopithecus_nigroviridis.k141_3755588                   50400 5 +     53615 ttttg
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2427 5 +     13857 ttttg
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18982 5 -     21945 ttttg
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20667 5 +     32033 ttttg
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73924 5 -     84148 tttTC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46162 5 -     78289 tttTC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_juara.k141_1687208                                44052 5 -     64179 tttTC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1160 5 -      3959 tttTC
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42677 5 +     45454 tttTC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48326 5 +     70886 tttTC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10499 5 +     30854 tttTC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34633 5 +     42133 tttTC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    2866 5 +     17741 tttTC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3491 5 -     15923 tttTC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673773 5 +   5030052 ttttc
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3767 5 -     16391 tttTC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3326 5 -     17186 tttTC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276389 5 +  21539123 tttTC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12555 5 +     48076 tttTC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7690 5 -     28759 tttTC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35246 5 +     44353 tttTC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50615 5 -     71267 tttTC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24673 5 -     33135 tttTC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Cacajao_ayresi.k141_96119                                   9479 5 +     28062 tttTC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44773 5 -     91139 tttTC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22299 5 +     95584 tttTC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22212 5 +    119600 tttTC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11864 5 +     18648 tttTC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11377 5 -     13885 tttTC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3470 5 -      8861 tttTC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455859 5 + 189096842 tttTC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3381 5 +      8664 tttTC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Cebuella_niveiventris.k141_592277                           6780 5 -     12580 tttTC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44838 5 +     53515 tttTC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374591 5 -  26074798 tttTC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9648 5 -     34880 tttTC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68744 5 -     89041 tttTC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cercocebus_atys.KQ010504.1                                143483 5 -   4669795 TTTCG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47222 5 +     47900 tttcg
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2655 5 -     14410 tttcg
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47037 5 -    148725 tttcg
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29315 5 -     40656 ttttg
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9274 5 +     20796 ttttg
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14388 5 -     17524 ttttg
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30120 5 -     34525 ttttg
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13900 5 -     25376 ttttg
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366487 5 -  39242232 ttttg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272214 5 +  21565898 ttttg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34579 5 -     45857 ttttg
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29480 5 -     32606 ttttg
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5643 5 +      8499 ttttg
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28042 5 +     70610 ttttg
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25002 5 +     36323 ttttg
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10585 5 -     32913 tttTC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             20998 5 -     40346 tttTC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21253 5 +    216457 tttTC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21042 5 +     39636 tttTC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33016 5 -     52013 tttTC
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44113 5 -    112038 tttTC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9664 5 +     34062 tttTC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345902 5 +  18827391 ttttg
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12441 5 -     44032 ttttg
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307288 5 - 135778131 TTTTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411701 5 -   2368649 TTTCG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381583 5 - 200372422 tttcg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5140 5 -     84244 tttcg
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                               265430 5 +  21539334 ttttg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3218903                                199 5 -      2763 tttcc
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                258620 5 - 186649187 tttcc
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    145088 5 -    630532 tttcc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               8134 5 +     12352 tttcc
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15321 5 +     55766 tttcc
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054849 5 + 191637585 tttcc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803727 5 +  11177569 tttcc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lagothrix_lagothricha.k141_246028                          44940 5 +    110728 tttTC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                         421 5 -     23187 tttTC
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            734 5 -     14280 tttTC
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         377 5 +      3713 tttTC
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      567 5 +      8855 tttTC
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5369 5 -     13645 tttTC
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lophocebus_aterrimus.ctg367                               336365 5 -   1826925 tttcg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              47757 5 -     61512 tttcg
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375419 5 -  60120075 tttcg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27687 5 +     30207 tttcg
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2525 5 -      5035 tttcg
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27640 5 +     30527 tttcg
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38816 5 -     50087 tttcg
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48561 5 +     51645 tttcg
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417763 5 - 187317192 TTTCG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401994 5 +  25927173 TTTCG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51165 5 -     62418 tttcg
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3696 5 +     14901 tttcg
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47638 5 +     59329 tttcg
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273545 5 +    668171 tttca
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2177 5 -      5049 tttcg
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5343 5 +     17132 tttcg
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324833 5 +  24302211 tttcg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359664 5 -    752769 tttcg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_582562                                11963 5 +     17804 tttTC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12463 5 -     12984 tttTC
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20782 5 -     26561 tttTC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24931 5 -     27822 ttttg
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Nasalis_larvatus.k141_1350636                              31710 5 +     34575 tttcg
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           56022 5 -    132029 tttcc
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12117 5 -     16345 tttcc
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18006 5 +     22201 tttcc
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416236 5 -  22158432 tttcc
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28411 5 -     54323 tttcc
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_paniscus.AJFE02004363.1                                   16 5 +      1263 tttcc
i Pan_paniscus.AJFE02004363.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1476603 5 - 189151597 TTTCC
i Pan_troglodytes.CM009242.2                             C 0 I 10
s Papio_anubis.CM001495.2                                   245842 5 - 183742232 TTTCG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12127 5 +     21308 tttcg
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294870 5 -  20919399 tttcg
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24767 5 -     27687 tttcg
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1446 5 +     10553 tttcg
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1406 5 -     10386 tttcg
i Papio_ursinus.k141_5784434                             C 0 C 0
s Piliocolobus_badius.k141_2704958                            5088 5 +     55023 tttcg
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4610 5 -     89929 tttcg
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5200 5 +     40849 tttcg
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256930 5 +  14605196 TTTCG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66481 5 +    207309 tttTC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7569 5 -     25401 tttTC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33317 5 +     58159 tttTC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33593 5 +     63561 tttTC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33353 5 +     51148 tttTC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558323 5 -   4542175 tttTC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33337 5 +     51125 tttTC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9754 5 +     39866 tttTC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4836 5 -      9282 tttTC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44240 5 -     87950 tttTC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44634 5 -     88961 tttTC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9332 5 -     39403 tttTC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44283 5 +     87928 tttTC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9331 5 -     60166 tttTC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44184 5 -     90634 tttTC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45651 5 +     89403 tttTC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181782 5 - 189387572 TTTCC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196525 5 -   9816681 tttcc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30290 5 +     69807 tttcg
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47471 5 -     80239 tttcg
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29657 5 +     91421 tttcg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156209 5 -   7812017 tttcg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10514 5 +     72585 tttcg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4119 5 +      7119 tttcg
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124789 5 + 195417433 TTTCG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238961 5 -   7961872 tttcg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_161125                                8912 5 +     12412 tttTC
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               373 5 +      9876 tttTC
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            15976 5 -     24931 tttTC
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                                856 5 +      4564 tttTC
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3661 5 -      7443 tttTC
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394567 5 - 209938924 tttTC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1276 5 +     10149 tttTC
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                616 5 +     10417 tttTC
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110739 5 + 121099817 ttttc
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32306 5 -     47369 tttTC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32692 5 -     79414 tttTC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29383 5 -     34454 tttTC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16784 5 -     22428 tttTC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31938 5 -     47109 tttTC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239968 5 +   5703754 tttTC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9558 5 +     21866 tttTC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                          1096 5 +     11297 tttcg
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31489 5 +     58920 tttcg
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17987 5 -     45317 tttcg
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25645 5 -     42441 tttcg
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28321 5 -     29113 tttcg
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31398 5 -     48123 tttcg
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393493 5 +   1523678 tttcc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                           355651 5 - 186847797 TTTCG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23397 5 +     26378 tttcg
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36196 5 -     78344 tttcg
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22722 5 +     25722 tttcg
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31152 5 -     62838 tttcg
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31143 5 +     46913 tttcg
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11880 5 -     28527 tttcg
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33087 5 -     64340 tttcg
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31125 5 -     63452 tttcg
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12572 5 +     22490 tttcg
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          538 5 +      9911 tttcg
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          333 5 -     33539 tttcg
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258092 5 -   6242583 ttttg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4111 5 +     19340 tttcg
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
e Fukomys_damarensis.KN121974.1                            2924071 19 -   3816255 I
e Myocastor_coypus.MyoCoy_scaffold_15261                     65008 2086 +     67721 I
e Sorex_araneus.JH798187.1                                 4672865 21 +  18376816 I
e Erinaceus_europaeus.JH835339.1                           3668030 21 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Capromys_pilorides.CapPil_scaffold_762519                   1425 14 -      1607 I
e Chinchilla_lanigera.JH722012.1                           1240651 14 -   2543920 I
e Nannospalax_galili.KL204047.1                             948241 19 +   3037898 I
e Dasyprocta_punctata.DasPun_flattened_line_15900            30037 20 +     75252 I
e Chrysochloris_asiatica.ChrAsi_scaffold_510450                261 34 -      4087 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              26210 20 -     33621 I
e Petromus_typicus.PetTyp_scaffold_17301                     33995 20 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005        3841 20 +      9367 I
e Octodon_degus.JH651603.1                                11057105 14 -  11899542 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73708 18 +    143317 I
e Heterocephalus_glaber.JH602082.1                         1934458 20 -  22651954 I
e Dolichotis_patagonum.DolPat_scaffold_80628                 11123 20 +     14636 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   7369 20 -     10735 I
e Dipodomys_ordii.KN672350.1                              18952458 19 -  37912305 I
e Dinomys_branickii.DinBra_scaffold_10381                   100725 14 -    115145 I
e Cuniculus_paca.CunPac_flattened_line_7025                   9027 20 +     36344 I
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  20495 14 +     50838 I
e Cavia_tschudii.CavTsc_scaffold_23560                       64826 20 -     66877 I
e Cavia_porcellus.DS562891.1                               5001747 20 +  23407841 I
e Cavia_aperea.AVPZ01000300.1                              4998305 20 +  23392119 I
e Microgale_talazaci.MicTal_scaffold_6613                    48258 20 +    145209 I
e Echinops_telfairi.JH980293.1                            62857055 21 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               1514 29 +     11607 I
e Elephantulus_edwardii.JH947257.1                         1227257 63261 +  10337057 T
e Desmodus_rotundus.KZ672289.1                            11866876 21 -  20541912 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            607859 480 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                  383 480 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   21287 21 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2111566 21 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            14193 21 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     19872 21 +     24238 I
e Carollia_perspicillata.CarPer_scaffold_107871               1889 21 +      9923 I
e Tupaia_tana.TupTan_flattened_line_394                      11386 16 -     70247 I
e Tupaia_chinensis.KB320699.1                              1837335 16 -   4065304 I
e Zalophus_californianus.ZalCal_flattened_line_17732         30750 21 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                106674 21 -    112863 I
e Ursus_maritimus.KK499267.1                                183751 21 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8387 21 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          6321 21 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        40786 21 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1453538 21 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                199740 21 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14356737 21 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046        10121 21 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             27873 21 -     74585 I
e Lycaon_pictus.CM007581.1                                41616144 21 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        815110 21 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24917723 21 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45108570 21 -  63665305 I
e Canis_lupus_familiaris.chr16                            41616989 21 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          223854 21 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    10511 21 -     23171 I
e CanFam4.chr16                                           42506875 21 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  7019 21 -     15198 I
e Ailurus_fulgens.LNAC01001112.1                            217307 21 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20417187 21 +  29979442 I
e Zapus_hudsonius.ZapHud_scaffold_286923                      1519 19 -      1899 I
e Xerus_inauris.XerIna_scaffold_2302                        176106 20 -    224448 I
e Vicugna_pacos.KN270157.1                                   77945 21 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    5216 21 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17367416 21 -  33153633 I
e Trichechus_manatus.JH594705.1                            6483318 21 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   175537 21 -    200418 I
e Tonatia_saurophila.TonSau_scaffold_294                    481798 21 -    610378 I
e Tarsius_wallacei.k141_226975                                9424 21 +     20590 I
e Tarsius_lariang.k141_1733899                                2625 21 +      9917 I
e Tapirus_terrestris.TapTer_scaffold_755                    107257 21 -    539355 I
e Tapirus_indicus.TapInd_scaffold_7432                      193289 21 +    199430 I
e Tamandua_tetradactyla.TamTet_scaffold_224794                4353 410 +      5583 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                15928 21 +     22964 I
e Sus_scrofa.CM000828.4                                    6645603 21 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             126555 26 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1870371 24 +   3870691 I
e Solenodon_paradoxus.SolPar_flattened_line_126            1865755 21 -   1910179 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    51606 19 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    117252 12 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                        9921 21 +     16473 I
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76947 21 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2916402 21 +   3329780 I
e Rattus_norvegicus.chr16                                 37024781 19 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                   688 21 -     55207 I
e Puma_concolor.QAVW01001104.1                            18100777 21 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3538962 21 -   4952924 I
e Pteropus_alecto.KB030862.1                               5842447 21 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            53806 21 -     66298 I
e Psammomys_obesus.NESX01036366.1                            39881 19 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_165387                 5982 21 +      7663 I
e Plecturocebus_hoffmannsi.k141_3303950                      16258 0 -     67232 C
e Platanista_gangetica.PlaMin_flattened_line_83166            2835 21 +     19503 I
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             5603 13 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               5816 21 -     63832 I
e Peromyscus_maniculatus.KI615324.1                         249823 19 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16717 21 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1617764 21 +   2937107 I
e Panthera_tigris.KE722367.1                               3974122 21 +   8748460 I
e Panthera_pardus.KV860321.1                              18463463 21 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   26137 21 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                       6758 21 +     17875 I
e Ovis_aries.CM001607.2                                   26406239 21 -  44047080 I
e Oryctolagus_cuniculus.CM000791.1                       107106529 20 - 174332312 I
e Orcinus_orca.KB316932.1                                  8104291 21 +  10937097 I
e Onychomys_torridus.OnyTor_scaffold_28377                    6617 19 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    96039 18 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          16528 21 +    150152 I
e Odocoileus_virginianus.KZ100018.1                         438644 21 -    630418 I
e Noctilio_leporinus.NocLep_scaffold_7894                   129506 21 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1233888 21 -   7148211 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121350 414 +    130748 I
e Myotis_myotis.MyoMyo_scaffold_66571                         4022 21 +     18357 I
e Myotis_lucifugus.GL429869.1                               385237 21 +   4330536 I
e Myotis_davidii.KB100139.1                                4389209 21 +   6019432 I
e Myotis_brandtii.KE162005.1                               9795035 21 +  10118263 I
e Muscardinus_avellanarius.MusAve_scaffold_5560               1328 24 -    124358 I
e Mus_spretus.CM004101.1                                  39499056 19 + 130317789 I
e Mus_pahari.LT608297.1                                   58218083 19 +  89631738 I
e Mus_musculus.chr8                                       41690137 19 + 129401213 I
e Mus_caroli.LT608237.1                                   35596598 19 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          42768 21 +     47283 I
e Mungos_mungo.MunMun_flattened_line_18455                   20135 25 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  27554 21 -     82753 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 180898 21 +    366855 I
e Monodon_monoceros.MonMon_M_scaffold_103                   361222 21 +    437263 I
e Miniopterus_schreibersii.MinSch_scaffold_23309             43735 21 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6364811 21 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15965421 18 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                186669 21 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     89117 21 +     93471 I
e Mesocricetus_auratus.KB708134.1                         17431709 5 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 52344 19 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       152180 21 +    207569 I
e Marmota_marmota.CZRN01000018.1                           7503020 20 +  40650429 I
e Manis_pentadactyla.KN006162.1                             222459 21 +    317179 I
e Manis_javanica.JSZB01003497.1                             675159 21 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                224840 21 -    270270 I
e Loxodonta_africana.GL010049.1                           39086636 21 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             342833 21 +    662738 I
e Lasiurus_borealis.LasBor_scaffold_26245                    34025 823 -     49555 I
e Kogia_breviceps.KogBre_flattened_line_3970                 73489 21 -     97402 I
e Jaculus_jaculus.JH725527.1                               1241634 19 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447               11648 21 -     16823 I
e Ictidomys_tridecemlineatus.JH393364.1                     388807 20 +   7955117 I
e Hystrix_cristata.HysCri_scaffold_5660                       9624 20 -    135385 I
e Hyaena_hyaena.HyaHya_flattened_line_14808                  71765 21 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_790761                156 21 +       338 I
e Hipposideros_armiger.JXIK01000431.1                      1553250 21 -   1711038 I
e Hippopotamus_amphibius.HipAmp_scaffold_38803                9254 12 -     36432 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                1991 21 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 11112 21 +     48891 I
e Helogale_parvula.HelPar_flattened_line_2585                32405 26 -    327341 I
e Graphiurus_murinus.GraMur_scaffold_10447                    4319 20 -     78134 I
e Glis_glis.GliGli_scaffold_163929                            3252 20 -      6791 I
e Giraffa_tippelskirchi.LVKQ01S015573.1                      93447 21 -     95226 I
e Galeopterus_variegatus.GalVar_scaffold_51812                3359 21 -     28519 I
e Felis_nigripes.FelNig_flattened_line_31944                 29314 21 -     30238 I
e Felis_catus_fca126.CM031415.1                          185118214 21 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114               466 21 +     25849 I
e Eschrichtius_robustus.EscRob_flattened_line_8968           72753 21 -    133382 I
e Equus_przewalskii.KK951119.1                              412963 21 -    498745 I
e Equus_caballus.CM000403.2                               21376981 21 +  39960074 I
e Equus_asinus.JREZ01000139.1                              3043042 21 -   4378816 I
e Eptesicus_fuscus.JH977646.1                             12580470 21 +  14770903 I
e Ellobius_talpinus.LOJH01026522.1                           15931 18 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          33995 18 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       241729 21 -    607251 I
e Eidolon_helvum.AWHC01266696.1                               7895 21 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  140894 21 -    198055 I
e Dicerorhinus_sumatrensis.PEKH010002091.1                  666094 21 -   1390856 I
e Delphinapterus_leucas.KZ290073.1                        18633545 21 -  35494412 I
e Ctenodactylus_gundi.CteGun_scaffold_65                    647321 21 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              5972 22 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118118 19 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 46355 7 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          4585 21 -      8242 I
e Condylura_cristata.JH655891.1                           35808549 21 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20655 21 +     27315 I
e Cephalopachus_bancanus.k141_1689090                         4697 21 -      5494 I
e Catagonus_wagneri.CatWag_scaffold_2839                     81202 21 -    217609 I
e Castor_canadensis.CasCan_scaffold_39952                    29624 14 -     39886 I
e Carlito_syrichta.NW_007259797.1                           272738 21 +    496798 I
e Capra_hircus.CM004588.1                                 26593375 21 +  44709034 I
e Capra_aegagrus.CM003241.1                               27411099 223 -  46296322 I
e Camelus_ferus.KB017975.1                                 1210554 21 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4666896 21 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7632609 21 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1532012 21 -   4408762 I
e Bos_taurus.CM000203.6                                   27547004 21 -  45695690 I
e Bos_mutus.JH880303.1                                      756862 21 +   1948126 I
e Bos_indicus.CM003047.1                                  20358298 21 +  48749331 I
e Bison_bison.KN261452.1                                     23908 21 +    288883 I
e Beatragus_hunteri.BeaHun_scaffold_7278                     88379 21 +    124022 I
e Balaenoptera_bonaerensis.DF411050.1                         1639 21 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7965139 21 -  23207421 I
e Aplodontia_rufa.AprRuf_scaffold_46868                      25938 7 -     32367 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52449 21 -     68529 I
e Anoura_caudifer.AnoCau_scaffold_1412                      178536 2 -    412891 I
e Ammotragus_lervia.NIVO01071767.1                         1587372 21 +   2318259 I
e Alouatta_discolor.k141_2561099                             45595 0 +     55831 C
e Allactaga_bullata.AllBul_scaffold_20030                    20085 19 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     27785 29 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           814518 21 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9453 10 +     36723 tgagga-----------------aag---a
s Acinonyx_jubatus.LLWD01001279.1                           814539 21 +   1699592 AATGGAA----TTGTGCT-A-TGAAG---T
i Acinonyx_jubatus.LLWD01001279.1                        I 21 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27814  4 +     63021 -----------------------AAG---T
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 29 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20417208 21 +  29979442 ATTGGA-CC--T-GTGGT-G-TGAAG---T
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 21 C 0
s Ailurus_fulgens.LNAC01001112.1                            217328 21 +    347723 AATGGA-CC--T-GTGCT-G-TGAAG---T
i Ailurus_fulgens.LNAC01001112.1                         I 21 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    20104 20 -     61208 AATGTAAC---T-GTGCT-G-TGAA----T
i Allactaga_bullata.AllBul_scaffold_20030                I 19 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50405 10 +     53615 tgagac-----------------aag---a
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2432 10 +     13857 tgagac-----------------aag---a
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18987 10 -     21945 tgagac-----------------aag---a
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20672 10 +     32033 tgagac-----------------aag---a
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73929 10 -     84148 AACATA-----------------TGA---A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46167 10 -     78289 AACATA-----------------TGA---A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45595  9 +     55831 -acata-----------------tga---a
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44057 10 -     64179 AACATA-----------------TGA---A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1165 10 -      3959 AACATA-----------------TGA---A
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42682 10 +     45454 AACATA-----------------TGA---A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48331 10 +     70886 AACATA-----------------TGA---A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10504 10 +     30854 AACATA-----------------TGA---A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34638 10 +     42133 AACATA-----------------TGA---A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587393 21 +   2318259 AATAAAAC---T-GTGCT-A-TGAAG---T
i Ammotragus_lervia.NIVO01071767.1                       I 21 I 513
s Antilocapra_americana.AntAmePen_scaffold_21030             52470 21 -     68529 AATGCAAC---T-GTGCT-A-TGAAG---T
i Antilocapra_americana.AntAmePen_scaffold_21030         I 21 I 474
s Aotus_azarae.k141_887050                                    2871 10 +     17741 AGCATA-----------------TCA---A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3496 10 -     15923 AGCATA-----------------TCA---A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673778 10 +   5030052 agCATA-----------------GCA---a
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3772 10 -     16391 AGCATA-----------------TCA---A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3331 10 -     17186 AGCATA-----------------TCA---A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25945  4 -     32367 -----------------------ATG---C
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 7 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  7040 21 -     15198 AACGGA-CC--T-GTGCT-A-GGAAG---T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 21 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276394 10 +  21539123 AACATA-----------------TGA---A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12560 10 +     48076 AACATA-----------------TGA---A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7695 10 -     28759 AACATA-----------------TGA---A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35251 10 +     44353 AACATA-----------------TGA---A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50620 10 -     71267 AACATA-----------------TGA---A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24678 10 -     33135 AACATA-----------------TGA---A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7965160 21 -  23207421 AATGGGAC---T-GTGCT-G-TGAAG---T
i Balaenoptera_acutorostrata.KI537508.1                  I 21 C 0
s Balaenoptera_bonaerensis.DF411050.1                         1660 21 -     25979 AATGGGAC---T-GTGCT-G-TGAAG---T
i Balaenoptera_bonaerensis.DF411050.1                    I 21 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     88400 21 +    124022 AATGCAAC---T-GTGCT-A-TGAAG---T
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 21 I 506
s Bison_bison.KN261452.1                                     23929 21 +    288883 AATGCAAC---T-GTGCT-A-TGAAG---T
i Bison_bison.KN261452.1                                 I 21 I 519
s Bos_indicus.CM003047.1                                  20358319 21 +  48749331 AATGCAAC---T-GTGCT-A-TGAAG---T
i Bos_indicus.CM003047.1                                 I 21 I 519
s Bos_mutus.JH880303.1                                      756883 21 +   1948126 AATGCAAC---T-GTGCT-A-TGAAG---T
i Bos_mutus.JH880303.1                                   I 21 I 519
s Bos_taurus.CM000203.6                                   27547025 21 -  45695690 AATGCAAC---T-GTGCT-A-TGAAG---T
i Bos_taurus.CM000203.6                                  I 21 I 519
s Bubalus_bubalis.KI419123.1                               1532033 21 -   4408762 AATGCAAC---T-GTGCT-A-TGAAG---T
i Bubalus_bubalis.KI419123.1                             I 21 I 519
s Cacajao_ayresi.k141_96119                                   9484 10 +     28062 AACGTA-----------------TCA---A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44778 10 -     91139 AACATA-----------------TCA---A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22304 10 +     95584 AACATA-----------------TCA---A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22217 10 +    119600 AACATA-----------------TCA---A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11869 10 +     18648 AACATA-----------------TCA---A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11382 10 -     13885 AACATA-----------------TCA---A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3475 10 -      8861 AACATA-----------------TCA---G
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455864 10 + 189096842 AACATA-----------------TCA---G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3386 10 +      8664 AACATA-----------------TCA---G
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632630 21 +  17673402 AAGGGAAC---T-GTGCT-G-TGATG---T
i Camelus_bactrianus.KN276810.1                          I 21 C 0
s Camelus_dromedarius.KN272107.1                           4666917 21 +   7040546 AAGGGAAC---T-GTGCT-G-TGATG---T
i Camelus_dromedarius.KN272107.1                         I 21 C 0
s Camelus_ferus.KB017975.1                                 1210575 21 +   1652518 AAGGGAAC---T-GTGCT-G-TGATG---T
i Camelus_ferus.KB017975.1                               I 21 C 0
s CanFam4.chr16                                           42506896 21 +  60362399 AATGGAAC---T-GTGCT-G-TGAAG---T
i CanFam4.chr16                                          I 21 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10532 21 -     23171 AATGGAAC---T-GTGCT-G-TGAAG---T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 21 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223875 21 +   9314153 AATGGAAC---T-GTGCT-G-TGAAG---T
i Canis_lupus_dingo.QKWQ01000480.1                       I 21 C 0
s Canis_lupus_familiaris.chr16                            41617010 21 +  59632846 AATGGAAC---T-GTGCT-G-TGAAG---T
i Canis_lupus_familiaris.chr16                           I 21 C 0
s Canis_lupus_orion.HG994398.1                            45108591 21 -  63665305 AATGGAAC---T-GTGCT-G-TGAAG---T
i Canis_lupus_orion.HG994398.1                           I 21 C 0
s Capra_aegagrus.CM003241.1                               27411322 21 -  46296322 AATGCAAC---T-GTGCT-A-TGAAG---T
i Capra_aegagrus.CM003241.1                              I 223 I 513
s Capra_hircus.CM004588.1                                 26593396 21 +  44709034 AATGCAAC---T-GTGCT-A-TGAAG---T
i Capra_hircus.CM004588.1                                I 21 I 513
s Capromys_pilorides.CapPil_scaffold_762519                   1439 21 -      1607 AAGAAAA----TTGTTCT-G-TGAAG---T
i Capromys_pilorides.CapPil_scaffold_762519              I 14 C 0
s Carlito_syrichta.NW_007259797.1                           272759  9 +    496798 -AATGA-----------------AAC---T
i Carlito_syrichta.NW_007259797.1                        I 21 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1910 21 +      9923 AGCGGA-CC--T-GTGCT-A-GGAAG---T
i Carollia_perspicillata.CarPer_scaffold_107871          I 21 C 0
s Castor_canadensis.CasCan_scaffold_39952                    29638 21 -     39886 AATGAA-CC--T-G-CGCTG-TGAAG---T
i Castor_canadensis.CasCan_scaffold_39952                I 14 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     81223 21 -    217609 AATGGAAC---T-GTGCT-G-TAAAT---T
i Catagonus_wagneri.CatWag_scaffold_2839                 I 21 C 0
s Cavia_aperea.AVPZ01000300.1                              4998325 21 +  23392119 AACAAAA---AT-GTGCT-g-tgaaa---a
i Cavia_aperea.AVPZ01000300.1                            I 20 C 0
s Cavia_porcellus.DS562891.1                               5001767 21 +  23407841 aacaaa----aatgtgct-g-tgaaa---a
i Cavia_porcellus.DS562891.1                             I 20 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       64846 21 -     66877 AACAAAA---AT-GTGCT-G-TGAAA---A
i Cavia_tschudii.CavTsc_scaffold_23560                   I 20 C 0
s Cebuella_niveiventris.k141_592277                           6785 10 -     12580 AACATA-----------------TCA---A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44843 10 +     53515 AACATA-----------------TCA---A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374596 10 -  26074798 AACATA-----------------TCA---A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9653 10 -     34880 AACATA-----------------TCA---A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68749 10 -     89041 AACATA-----------------TCA---A
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4718  9 -      5494 -AATGA-----------------AAC---T
i Cephalopachus_bancanus.k141_1689090                    I 21 C 0
s Ceratotherium_simum.JH767749.1                          15493843 21 -  27778364 AATGGAAC---T-GTGCT-G-TGAAG---T
i Ceratotherium_simum.JH767749.1                         I 21 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20676 21 +     27315 AATGGAAC---T-GTGCT-G-TGAAG---T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 21 C 0
s Cercocebus_atys.KQ010504.1                                143488 10 -   4669795 TGAGAC-----------------AAG---A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47227 10 +     47900 tgagac-----------------aag---a
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2660 10 -     14410 tgagac-----------------aag---a
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47042 10 -    148725 tgagac-----------------aag---a
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29320 10 -     40656 tgagac-----------------agg---a
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9279 10 +     20796 tgagac-----------------agg---a
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14393 10 -     17524 tgagac-----------------aag---a
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30125 10 -     34525 tgagac-----------------aag---a
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13905 10 -     25376 tgagat-----------------aag---a
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366492 10 -  39242232 tgagac-----------------aag---a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272219 10 +  21565898 tgagac-----------------aag---a
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34584 10 -     45857 tgagac-----------------aag---a
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29485 10 -     32606 tgagac-----------------aag---a
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5648 10 +      8499 tgagac-----------------aag---a
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28047 10 +     70610 tgagac-----------------aag---a
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25007 10 +     36323 tgagac-----------------aag---a
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            14214 21 -     19938 GATGAAAC---TGGGC-T-G-TGAAA---T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 21 C 0
s Cheracebus_lucifer.k141_2312002                            10590 10 -     32913 AACATG-----------------TCA---A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21003 10 -     40346 AACATG-----------------TCA---A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21258 10 +    216457 AACATG-----------------TCA---A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21047 10 +     39636 AACATG-----------------TCA---A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240665 21 -   2543920 AGTAAGA---AT-G-CTCTG-TGAAG---T
i Chinchilla_lanigera.JH722012.1                         I 14 C 0
s Chiropotes_albinasus.k141_1091259                          33021 10 -     52013 CACATA-----------------TCA---A
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44118 10 -    112038 AACATA-----------------TCA---A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9669 10 +     34062 AACATA-----------------TCA---A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345907 10 +  18827391 tgagac-----------------aag---a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12446 10 -     44032 tgagac-----------------aag---a
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307293 10 - 135778131 TGAGAc-----------------aag---a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  863 21 +     10270 AATGGAAC--TTTGT--T-G-TGAAG---T
i Choloepus_didactylus.ChoDid_scaffold_147047            I 480 I 1
s Choloepus_hoffmanni.KN194906.1                            608339 21 -    839153 AATGGAAC--TTTGT--T-G-TGAAG---T
i Choloepus_hoffmanni.KN194906.1                         I 480 I 1
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                295 14 -      4087 AAC--------T-G-C-T-G-TGAAA---T
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          I 34 C 0
s Colobus_angolensis.KN981557.1                             411706 10 -   2368649 TGAGAc-----------------aag---a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381588 10 - 200372422 tgagac-----------------aag---a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5145 10 -     84244 tgagac-----------------aag---a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808570 21 +  53390261 AATAGAAC---T-GTGCT-A-TGAAG---T
i Condylura_cristata.JH655891.1                          I 21 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4606 21 -      8242 AATGGAAC---T-G-CCCTG-TGGAG---T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 21 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 46362 21 -     83289 AGTGAAAC---T-GATAT-G-TGAAA---T
i Cricetomys_gambianus.CriGam_scaffold_14425             I 7 C 0
s Cricetulus_griseus.LT883664.1                          213118137 21 - 224834208 TGTGAAAC---T-GTTCT-A-AAAAG---T
i Cricetulus_griseus.LT883664.1                          I 19 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              5994 21 +     87169 AATGGATC---T-GTGCT-G-TGGAG---T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 22 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    647342 21 -   1526836 AATGGGAC---T-GTGCT-G-TGAAG---T
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 21 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20509 21 +     50838 ATGAAAA---AT-GTTCT-G-TGAAA---T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 14 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                   9047 21 +     36344 AATAAAA---AT-GTGCT-G-TAAAA---T
i Cuniculus_paca.CunPac_flattened_line_7025              I 20 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            30057 21 +     75252 AATAGAA---AT-GTGCT-G-TGAAA---T
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 20 C 0
s Dasypus_novemcinctus.JH564415.1                          2111587 21 -   2246927 aatgaa-ag-agtGT--A-G-TGAAA---T
i Dasypus_novemcinctus.JH564415.1                        I 21 C 0
s Delphinapterus_leucas.KZ290073.1                        18633566 21 -  35494412 AATGGAA----TTGTGCT-G-TGAAG---T
i Delphinapterus_leucas.KZ290073.1                       I 21 C 0
s Desmodus_rotundus.KZ672289.1                            11866897 21 -  20541912 AGTGGA-CC--T-GTGCT-A-GGAAG---T
i Desmodus_rotundus.KZ672289.1                           I 21 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  666115 21 -   1390856 AATGGAAC---T-GTGCT-G-TGAAG---T
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 21 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  140915 21 -    198055 AATGGAAC---T-GTGCT-G-TGAAG---T
i Diceros_bicornis.DicBicMic_scaffold_5955               I 21 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   100739 21 -    115145 AGTAAAAAT-ATT--C-T-G-CAAAG---T
i Dinomys_branickii.DinBra_scaffold_10381                I 14 C 0
s Dipodomys_ordii.KN672350.1                              18952477 21 -  37912305 AATGGAAC---T-ATGAT-G-TGAAG---T
i Dipodomys_ordii.KN672350.1                             I 19 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   7389 21 -     10735 AATGGAAC---T-ATGAT-G-TGAAG---T
i Dipodomys_stephensi.DipSte_scaffold_89095              I 20 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 11143 21 +     14636 AATAAAA---AT-GTGCT-G-TGAAA---T
i Dolichotis_patagonum.DolPat_scaffold_80628             I 20 C 0
s Echinops_telfairi.JH980293.1                            62857076 21 - 111700974 AAAGCAGCT-CTT--C-T-G-TGAAG---T
i Echinops_telfairi.JH980293.1                           I 21 C 0
s Eidolon_helvum.AWHC01266696.1                               7916 21 +     19438 AATGGAACC-AT-G-C-T-A-TAAAG---T
i Eidolon_helvum.AWHC01266696.1                          I 21 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       241750 21 -    607251 AATACAAC---T-GTGCT-A-TGAAG---T
i Elaphurus_davidianus.JRFZ01104969.1                    I 21 I 525
s Ellobius_lutescens.LOEQ01008920.1                          34013 21 +    110024 AGTGAAAC---T-GTGCT-A-TGAAG---C
i Ellobius_lutescens.LOEQ01008920.1                      I 18 C 0
s Ellobius_talpinus.LOJH01026522.1                           15949 21 +     18970 AGTGAAAC---T-GTGCT-A-TGAAG---T
i Ellobius_talpinus.LOJH01026522.1                       I 18 C 0
s Enhydra_lutris.KZ291758.1                               24917744 21 +  41312741 AATGGATC---T-GTGCT-G-TGAAG---T
i Enhydra_lutris.KZ291758.1                              I 21 C 0
s Eptesicus_fuscus.JH977646.1                             12580491 21 +  14770903 AATGGAAAG-GT-G-C-T-A-TGAAG---T
i Eptesicus_fuscus.JH977646.1                            I 21 C 0
s Equus_asinus.JREZ01000139.1                              3043063 21 -   4378816 AATGGAAC---T-GTGCT-G-TGAAG---T
i Equus_asinus.JREZ01000139.1                            I 21 C 0
s Equus_caballus.CM000403.2                               21377002 21 +  39960074 AATGGAAC---T-GTGCT-G-TGAAG---T
i Equus_caballus.CM000403.2                              I 21 C 0
s Equus_przewalskii.KK951119.1                              412984 21 -    498745 AATGGAAC---T-GTGCT-G-TGAAG---T
i Equus_przewalskii.KK951119.1                           I 21 C 0
s Erinaceus_europaeus.JH835339.1                           3668051 21 +   7059049 CATGGAA---AT-GTACT-A-TGAAG---T
i Erinaceus_europaeus.JH835339.1                         I 21 C 0
s Erythrocebus_patas.Contig38                               265435 10 +  21539334 tgagac-----------------aag---a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72774 21 -    133382 AATGGAACC-GT-G-C-T-G-TGAAG---T
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 21 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114               487 21 +     25849 AATGGAAC---T-GTGCT-G-TGAAG---T
i Eubalaena_japonica.EubJap_flattened_line_57114         I 21 C 0
s Felis_catus.CM001381.2                                 186248449 21 - 206538554 AGTGGA----TTTGTGCT-A-TGAAG---T
i Felis_catus.CM001381.2                                 I 21 C 0
s Felis_catus_fca126.CM031415.1                          185118235 21 - 205367284 AATGGA----TTTGTGCT-A-TGAAG---T
i Felis_catus_fca126.CM031415.1                          I 21 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 29335 21 -     30238 AATGGA----TTTGTGCT-A-TGAAG---T
i Felis_nigripes.FelNig_flattened_line_31944             I 21 C 0
s Fukomys_damarensis.KN121974.1                            2924090 21 -   3816255 agtaaaaat-gtgcT----G-TGAAG---T
i Fukomys_damarensis.KN121974.1                          I 19 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                3380 21 -     28519 GATAGAAC---T-GTGCT-G-TTAAG---T
i Galeopterus_variegatus.GalVar_scaffold_51812           I 21 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      93468 21 -     95226 AATGCAAC---T-GTGCC-A-TGAAG---T
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 21 I 519
s Glis_glis.GliGli_scaffold_163929                            3272 21 -      6791 AATGGAATC-GT-G-C-T-G-TGAAC---T
i Glis_glis.GliGli_scaffold_163929                       I 20 C 0
s Gorilla_beringei.k141_3218903                                204 10 -      2763 tgagga-----------------aag---a
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                258625 10 - 186649187 tgagga-----------------aag---a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    4339 21 -     78134 AATGGAACC-GT-G-C-T-G-TGAAG---T
i Graphiurus_murinus.GraMur_scaffold_10447               I 20 C 0
s Helogale_parvula.HelPar_flattened_line_2585                32431 21 -    327341 AATGGATC---T-GTGCT-G-TGAAG---T
i Helogale_parvula.HelPar_flattened_line_2585            I 26 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 11133 21 +     48891 AATGCAAC---T-GTGCT-A-TGAAG---T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 21 I 511
s Heterocephalus_glaber.JH602082.1                         1934478 21 -  22651954 AATAGAA---AT-GTGCT-G-TGAAG---T
i Heterocephalus_glaber.JH602082.1                       I 20 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                2012 20 +      8654 CCCAGGAC---T-GGC-T-T-TGCAG---T
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 21 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                9266 16 -     36432 -----AAC---T-GTGCT-G-TGAAG---T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 12 C 0
s Hipposideros_armiger.JXIK01000431.1                      1553271 21 -   1711038 GGTGGAACC-AT---CCT-G-TGAAG---T
i Hipposideros_armiger.JXIK01000431.1                    I 21 C 0
s Hipposideros_galeritus.HipGal_scaffold_790761                177 21 +       338 GGTGCAACC-AT---CCT-G-TGAAG---T
i Hipposideros_galeritus.HipGal_scaffold_790761          I 21 I 8
s Hoolock_leuconedys.ctg274                                    145093 10 -    630532 tgagga-----------------aag---a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71786 21 +     83186 AATGGATC---T-GTGCT-G-TGAAG---T
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 21 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73726 21 +    143317 AATAAAA---AT-GTGCT-G-TGAAA---T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 18 C 0
s Hylobates_agilis.k141_1155965                               8139 10 +     12352 tgagga-----------------aag---a
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15326 10 +     55766 tgagga-----------------aag---a
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054854 10 + 191637585 tgagga-----------------aag---a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803732 10 +  11177569 tgagga-----------------aag---a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9644 21 -    135385 AATGGAA---AT-G-CGCTG-TGACG---T
i Hystrix_cristata.HysCri_scaffold_5660                  I 20 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     388827 21 +   7955117 AATGGAAC---T-GTGCT-G-TAAAG---T
i Ictidomys_tridecemlineatus.JH393364.1                  I 20 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               11669 21 -     16823 AATGGAAC---T-GTGCT-G-TGAAG---T
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 21 C 0
s Jaculus_jaculus.JH725527.1                               1241653 20 +   9596543 AATATGA----TTGTACT-T-TTAA----T
i Jaculus_jaculus.JH725527.1                             I 19 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 73510 21 -     97402 AATGGAAC---T-GTGCT-G-TGAAG---T
i Kogia_breviceps.KogBre_flattened_line_3970             I 21 C 0
s Lagothrix_lagothricha.k141_246028                          44945 10 +    110728 AACATA-----------------TGA---A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64781 21 -     65777 AATGGAA----TGGTGCT-G-TGAAG---C
i Lasiurus_borealis.LasBor_scaffold_16567                I 36 C 0
s Leontocebus_fuscicollis.k141_3470480                         426 10 -     23187 AACATA-----------------TCA---A
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            739 10 -     14280 AACATA-----------------TCA---A
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         382 10 +      3713 AACATA-----------------TCA---A
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      572 10 +      8855 AACATA-----------------TCA---A
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5374 10 -     13645 AACATA-----------------TCA---A
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        815131 21 -   3914936 AATGGA--T-AT-GTGCT-G-TGAAG---T
i Leptonychotes_weddellii.KB714746.1                     I 21 C 0
s Lepus_americanus.LepAme_scaffold_56121                     19893 21 +     24238 CATGGAAC---T-ATACC-A-TGAAA---T
i Lepus_americanus.LepAme_scaffold_56121                 I 21 C 0
s Lipotes_vexillifer.KE559953.1                             342854 21 +    662738 AATGGAAC---T-GTGCT-G-TGAAG---T
i Lipotes_vexillifer.KE559953.1                          I 21 C 0
s Lophocebus_aterrimus.ctg367                               336370 10 -   1826925 tgagac-----------------aag---a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086657 21 +  43346337 AACGGAAC---T-GTGCT-G-TGAAG---T
i Loxodonta_africana.GL010049.1                          I 21 C 0
s Lycaon_pictus.CM007581.1                                41616165 21 +  59628241 AATGGAAC---T-GTGCT-G-TGAAG---T
i Lycaon_pictus.CM007581.1                               I 21 C 0
s Macaca_arctoides.k141_1757516                              47762 10 -     61512 tgagac-----------------aag---a
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375424 10 -  60120075 tgagac-----------------aag---a
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27692 10 +     30207 tgagac-----------------aag---a
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2530 10 -      5035 tgagac-----------------aag---a
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27645 10 +     30527 tgagac-----------------aag---a
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38821 10 -     50087 tgagac-----------------aag---a
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48566 10 +     51645 tgagac-----------------aag---a
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417768 10 - 187317192 TGAGAc-----------------aag---a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              401999 10 +  25927173 TGAGAc-----------------aag---a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51170 10 -     62418 tgagac-----------------aag---a
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3701 10 +     14901 tgagac-----------------aag---a
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47643 10 +     59329 tgagac-----------------aag---a
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273550 10 +    668171 tgagac-----------------aag---a
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2182 10 -      5049 tgagac-----------------aag---a
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5348 10 +     17132 tgagac-----------------aag---a
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224861 18 -    270270 AATGGAAGA-CT-AT-------AAAG---T
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 21 C 0
s Mandrillus_leucophaeus.scaffold280                        324838 10 +  24302211 tgagac-----------------aag---a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359669 10 -    752769 tgagac-----------------aag---a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675180 20 -    737560 AATGGA-C---T-GTGCT-G-TGAAG---T
i Manis_javanica.JSZB01003497.1                          I 21 C 0
s Manis_pentadactyla.KN006162.1                             222480 20 +    317179 AATGGA-C---T-GTGCT-G-TGAAG---T
i Manis_pentadactyla.KN006162.1                          I 21 C 0
s Marmota_marmota.CZRN01000018.1                           7503040 21 +  40650429 AATGGAAC---T-GTGCt-g-taaag---t
i Marmota_marmota.CZRN01000018.1                         I 20 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       152201 24 +    207569 GAGGGAACC-CTTGTCCC-G-TGAAG---T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 21 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             27894 21 -     74585 AATGGAAGT-CT-G-C-T-G-TGAAG---T
i Mellivora_capensis.MelCap_flattened_line_19308         I 21 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52363 21 -    140813 AATGAAAC---T-GTGCT-G-TGAAG---T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 19 C 0
s Mesocricetus_auratus.KB708134.1                         17431714  4 +  29670104 -----------------------AAG---T
i Mesocricetus_auratus.KB708134.1                        I 5 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     89138 21 +     93471 AATGGAAC---T-GTGCT-G-TGAAG---T
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 21 C 0
s Mico_argentatus.k141_582562                                11968 10 +     17804 AACATA-----------------TCA---A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12468 10 -     12984 AACATA-----------------TCA---A
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20787 10 -     26561 AACATA-----------------TCA---A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48278 21 +    145209 GAAGGGGC---T-G-CTCTG-TGACA---G
i Microgale_talazaci.MicTal_scaffold_6613                I 20 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                186690 21 +    200668 AGTGGG-CC--T-GTACT-A-GGACA---T
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 21 C 0
s Microtus_ochrogaster.CM001695.1                         15965439 21 +  27267610 AGTGAAA----TTGTGCT-A-TGAAG---T
i Microtus_ochrogaster.CM001695.1                        I 18 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6364832 21 -   8254450 AATGGAAC---T-GTGCT-A-TGAAG---T
i Miniopterus_natalensis.LDJU01000034.1                  I 21 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             43756 21 -     48117 AATGGAAC---T-GTGCT-A-TGAAG---T
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 21 C 0
s Miopithecus_ogouensis.k141_1534655                         24936 10 -     27822 tgagac-----------------aag---a
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        10142 21 +     27589 AATGGA--T-AT-GTCCT-G-TGAAG---T
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 21 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   361243 21 +    437263 AATGGAA----TTGTGCT-G-TGAAG---T
i Monodon_monoceros.MonMon_M_scaffold_103                I 21 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180919 21 +    366855 AGTGGG-CC--T-GTGCT-A-TGAAG---T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 21 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  27575 21 -     82753 AATGCAAC---T-GTGCT-A-TGAAG---T
i Moschus_moschiferus.MosMos_scaffold_13123              I 21 I 514
s Mungos_mungo.MunMun_flattened_line_18455                   20160 20 -     63510 -AAGGATC---T-GTGCT-G-TGAAG---T
i Mungos_mungo.MunMun_flattened_line_18455               I 25 C 0
s Murina_feae.MurFea_scaffold_17764                          42789 21 +     47283 AATGGA-C---TGGTGCT-A-TGAAG---T
i Murina_feae.MurFea_scaffold_17764                      I 21 C 0
s Mus_caroli.LT608237.1                                   35596617 21 + 120012414 AGTGTAAC---TGGGC-T-G-TACTG---T
i Mus_caroli.LT608237.1                                  I 19 C 0
s Mus_musculus.chr8                                       41690156 21 + 129401213 AGTGAAAC---TGGGC-T-G-TACTG---T
i Mus_musculus.chr8                                      I 19 C 0
s Mus_pahari.LT608297.1                                   58218102 21 +  89631738 AGTGAAAC---TGGGC-T-G-TACTG---T
i Mus_pahari.LT608297.1                                  I 19 C 0
s Mus_spretus.CM004101.1                                  39499075 21 + 130317789 AGTGAAAC---TGGAC-T-G-CACTG---T
i Mus_spretus.CM004101.1                                 I 19 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               1352 21 -    124358 AATGGAAC---T-GTGCT-G-TGAAG---T
i Muscardinus_avellanarius.MusAve_scaffold_5560          I 24 C 0
s Mustela_putorius.JH418006.1                             14356758 21 +  14710649 aatgga--c-cT-GTACT-G-TGAAG---T
i Mustela_putorius.JH418006.1                            I 21 C 0
s Myocastor_coypus.MyoCoy_scaffold_93829                      4564 21 +     14880 AAGAAAA----TTGTTCT-G-TGAAG---T
i Myocastor_coypus.MyoCoy_scaffold_93829                 I 22 C 0
s Myotis_brandtii.KE162005.1                               9795056 21 +  10118263 AATGGAA----TGGTGCT-A-TGAAG---T
i Myotis_brandtii.KE162005.1                             I 21 C 0
s Myotis_davidii.KB100139.1                                4389230 21 +   6019432 AATGGAAGG-GT-G-C-T-A-TGAAG---T
i Myotis_davidii.KB100139.1                              I 21 C 0
s Myotis_lucifugus.GL429869.1                               385258 21 +   4330536 AATGGAA----TGGTGCT-A-TGAAG---T
i Myotis_lucifugus.GL429869.1                            I 21 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         4043 21 +     18357 AATGGAA----TGGTGCT-A-TGAAG---T
i Myotis_myotis.MyoMyo_scaffold_66571                    I 21 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121764 21 +    130748 AATGGAACT-AT-GTC---G-TGAAG---C
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 414 C 0
s Nannospalax_galili.KL204047.1                             948260 21 +   3037898 aatgaa----aatgtact-g-TGTGG---T
i Nannospalax_galili.KL204047.1                          I 19 C 0
s Nasalis_larvatus.k141_1350636                              31715 10 +     34575 tgagac-----------------aag---a
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233909 21 -   7148211 AATGGAA----TTGTGCT-G-TGAAG---T
i Neophocaena_asiaeorientalis.KZ687982.1                 I 21 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   129527 21 -    149072 GGTGGA-CC--T-GTGCT-G-CAAAG---T
i Noctilio_leporinus.NocLep_scaffold_7894                I 21 C 0
s Nomascus_annamensis.k141_1771965                           56027 10 -    132029 tgagga-----------------aag---a
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12122 10 -     16345 tgagga-----------------aag---a
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18011 10 +     22201 tgagga-----------------aag---a
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416241 10 -  22158432 tgagga-----------------aag---a
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28416 10 -     54323 tgagga-----------------aag---a
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199761 21 +   9404916 AACAGAAC---T-GTGCT-G-TGAAG---G
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 21 C 0
s Octodon_degus.JH651603.1                                11057119 21 -  11899542 aagaaa----actattct-g-TTAAG---T
i Octodon_degus.JH651603.1                               I 14 C 0
s Odobenus_rosmarus.KB229312.1                             1453559 21 +   2017862 AATGGATC---T-GTGCT-G-TGAAG---T
i Odobenus_rosmarus.KB229312.1                           I 21 C 0
s Odocoileus_virginianus.KZ100018.1                         438665 21 -    630418 AATGCAAC---T-GTGCT-A-TGAAG---T
i Odocoileus_virginianus.KZ100018.1                      I 21 I 523
s Okapia_johnstoni.LVCL01S0005463.1                          16549 21 +    150152 AATGCAA-G-TTTG-C-T-A-TGAAG---T
i Okapia_johnstoni.LVCL01S0005463.1                      I 21 I 519
s Ondatra_zibethicus.OndZib_scaffold_7387                    96057 21 -    140218 AGTGAAAC---T-GTGCT-A-TGAAG---T
i Ondatra_zibethicus.OndZib_scaffold_7387                I 18 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    6636 21 -     41509 AGTGACAC---T-G-CGC-TATAAAG---T
i Onychomys_torridus.OnyTor_scaffold_28377               I 19 C 0
s Orcinus_orca.KB316932.1                                  8104312 21 +  10937097 AATGGAAC---T-GTGCT-G-TGAAG---T
i Orcinus_orca.KB316932.1                                I 21 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               1543 21 +     11607 AACGGAAC---T-GTGCT-G-TGAGG---T
i Orycteropus_afer.OryAfe_flattened_line_201229          I 29 C 0
s Oryctolagus_cuniculus.CM000791.1                       107106549 21 - 174332312 CATGGAAC---T-GTACc-a-tgaaa---t
i Oryctolagus_cuniculus.CM000791.1                       I 20 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        40807 21 +    559221 AACGGAAC---T-GTGCT-G-TGAAG---T
i Otocyon_megalotis.JAEUCK010005147.1                    I 21 C 0
s Ovis_aries.CM001607.2                                   26406260 21 -  44047080 AATGCAAC---T-GTGCT-A-TGAAG---T
i Ovis_aries.CM001607.2                                  I 21 I 511
s Ovis_canadensis.OviCan_scaffold_67953                       6779 21 +     17875 AATGCAAC---T-GTGCT-A-TGAAG---T
i Ovis_canadensis.OviCan_scaffold_67953                  I 21 I 509
s Pan_paniscus.AJFE02004363.1                                   21 10 +      1263 tgagga-----------------aaG---A
i Pan_paniscus.AJFE02004363.1                            C 0 C 0
s Pan_troglodytes.KZ622849.1                                 37377 10 -    110857 tgagga-----------------aaG---A
i Pan_troglodytes.KZ622849.1                             I 463 I 138
s Panthera_onca.PanOnc_flattened_line_3271                   26158 21 -    230217 AATGGATC---T-GTGCT-A-TGAAG---T
i Panthera_onca.PanOnc_flattened_line_3271               I 21 C 0
s Panthera_pardus.KV860321.1                              18463484 21 -  18783137 AATGGATC---T-GTGCT-A-TGAAG---T
i Panthera_pardus.KV860321.1                             I 21 C 0
s Panthera_tigris.KE722367.1                               3974143 21 +   8748460 AATGGATC---T-GTGCT-A-TGAAG---T
i Panthera_tigris.KE722367.1                             I 21 C 0
s Pantholops_hodgsonii.KE114653.1                          1617785 21 +   2937107 AATGCAAC---T-GTGCT-A-TGAAG---T
i Pantholops_hodgsonii.KE114653.1                        I 21 I 512
s Papio_anubis.CM001495.2                                   245847 10 - 183742232 TGAGAc-----------------aag---a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12132 10 +     21308 tgagac-----------------aag---a
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294875 10 -  20919399 tgagac-----------------aag---a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24772 10 -     27687 tgagac-----------------aag---a
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1451 10 +     10553 tgagac-----------------aag---a
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1411 10 -     10386 tgagac-----------------aag---a
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16738 21 +     78924 AATGGA--T-AT-GTGCT-G-TGAAA---T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 21 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3861 21 +      9367 AATGTAAC----AGGGAT-G-TGAAA---T
i Perognathus_longimembris.PerPac_flattened_line_89005   I 20 C 0
s Peromyscus_maniculatus.KI615324.1                         249842 21 +  18517816 AGTGAAAC---T-GTGCT-A-TGAAG---T
i Peromyscus_maniculatus.KI615324.1                      I 19 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     34015 21 -     56120 AATAAAA---AT-GTGCT-G-TAACA---T
i Petromus_typicus.PetTyp_scaffold_17301                 I 20 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               5837 21 -     63832 AATGGAA----TTGTGCT-G-TGAAG---T
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 21 C 0
s Piliocolobus_badius.k141_2704958                            5093 10 +     55023 tgagac-----------------aag---a
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4615 10 -     89929 tgagac-----------------aag---a
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5205 10 +     40849 tgagac-----------------aag---a
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256935 10 +  14605196 TGAGAC-----------------aag---a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5616 21 +     22231 AATGGAA----TGGTGCT-A-TGAAG---T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 13 C 0
s Pithecia_albicans.k141_1239476                             66486 10 +    207309 AACATA-----------------TCC---A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7574 10 -     25401 AACATA-----------------TCA---G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33322 10 +     58159 AACATA-----------------TCC---A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33598 10 +     63561 AACATA-----------------TCC---A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33358 10 +     51148 AACATA-----------------TCC---A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558328 10 -   4542175 AACATA-----------------TCA---G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33342 10 +     51125 AACATA-----------------TCC---A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2856 21 +     19503 AATGTAAC---T-GTGCT-G-TGAAG---T
i Platanista_gangetica.PlaMin_flattened_line_83166       I 21 C 0
s Plecturocebus_bernhardi.k141_2549090                        9759 10 +     39866 AACATG-----------------TCA---A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4841 10 -      9282 AACATG-----------------TCA---A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44245 10 -     87950 AACATG-----------------TCA---A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44639 10 -     88961 AACATG-----------------TCA---A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9337 10 -     39403 AACATG-----------------TCA---A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44288 10 +     87928 AACATG-----------------TCA---A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9336 10 -     60166 AACATG-----------------TCA---A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16258  9 -     67232 -acatg-----------------tca---a
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44189 10 -     90634 AACATG-----------------TCA---A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45656 10 +     89403 AACATG-----------------TCA---A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181787 10 - 189387572 TGAGGA-----------------AAG---A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196530 10 -   9816681 tgagga-----------------aag---a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30295 10 +     69807 tgagac-----------------aag---a
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47476 10 -     80239 tgagac-----------------aag---a
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 6003 20 +      7663 CCCAGGAC---T-GGCC--T-TGCAG---T
i Procavia_capensis.ProCapCap_scaffold_165387            I 21 C 0
s Psammomys_obesus.NESX01036366.1                            39900 21 +     52041 aatgaaact-GT-G-C-T-G-TGAAG---T
i Psammomys_obesus.NESX01036366.1                        I 19 C 0
s Pteronotus_parnellii.KE847780.1                            53827 21 -     66298 AGTAGA-CC--T-G-CGC-TATAGAG---T
i Pteronotus_parnellii.KE847780.1                        I 21 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6342 21 -     18639 AATGGA-CCTCT-G-C-T-G-TGAAG---T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 21 C 0
s Pteropus_alecto.KB030862.1                               5842468 21 -  28871421 AATGGAACC-AT-G-C-T-A-TAAAG---T
i Pteropus_alecto.KB030862.1                             I 21 C 0
s Pteropus_vampyrus.KN525825.1                             3538983 21 -   4952924 AATGGAACC-AT-G-C-T-A-TAAAG---T
i Pteropus_vampyrus.KN525825.1                           I 21 C 0
s Puma_concolor.QAVW01001104.1                            18100798 21 +  38429054 AATGGA----TTTGTGCT-A-TGAAG---T
i Puma_concolor.QAVW01001104.1                           I 21 C 0
s Pygathrix_cinerea.k141_1153803                             29662 10 +     91421 tgagac-----------------aag---a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156214 10 -   7812017 tgagac-----------------aag---a
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10519 10 +     72585 tgagac-----------------aag---a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                   709 21 -     55207 AATGCAAC---T-GTGCT-A-TGAAG---T
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 21 I 517
s Rattus_norvegicus.chr16                                 37024800 21 -  90668790 AGTGAAAC---T-GTGCT-G-TGATA---T
i Rattus_norvegicus.chr16                                I 19 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2916423 21 +   3329780 AATGGAA----TCGTCCT-A-TGAAG---T
i Rhinolophus_sinicus.LVEH01000134.1                     I 21 C 0
s Rhinopithecus_bieti.k119_778604                             4124 10 +      7119 tgagac-----------------aag---a
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124794 10 + 195417433 TGAGAc-----------------aag---a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238966 10 -   7961872 tgagac-----------------aag---a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76968 21 -    116970 ATTGGAACC-AT-G-C-T-A-TAAAG---T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 21 C 0
s Saguinus_bicolor.k141_161125                                8917 10 +     12412 CACATA-----------------TCA---A
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               378 10 +      9876 CACATA-----------------TCA---A
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            15981 10 -     24931 CACATA-----------------TCA---G
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                                861 10 +      4564 CACATA-----------------TCA---A
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3666 10 -      7443 CACATA-----------------TCA---A
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394572 10 - 209938924 CACATA-----------------TCA---A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1281 10 +     10149 CACATA-----------------TCA---A
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                621 10 +     10417 CACATA-----------------TCA---A
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                        9942 21 +     16473 AATGCAAC---T-GTTCT-G-TGAAG---T
i Saiga_tatarica.SaiTat_scaffold_39512                   I 21 I 805
s Saimiri_boliviensis.NW_024100920.1                       1110744 10 + 121099817 aaCATA-----------------TCA---a
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32311 10 -     47369 AACATA-----------------TCA---A
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32697 10 -     79414 AACATA-----------------GCA---A
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29388 10 -     34454 AACATA-----------------GCA---A
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16789 10 -     22428 AACATA-----------------GCA---A
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31943 10 -     47109 AACATA-----------------TCA---A
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239973 10 +   5703754 AACATA-----------------TCA---A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9563 10 +     21866 AACATA-----------------TCA---A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    117264 21 +    313613 AATGGAAC---T-GTCCT-G-TGAAG---T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 12 C 0
s Semnopithecus_entellus.k141_583282                          1101 10 +     11297 tgagac-----------------aag---a
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31494 10 +     58920 tgagac-----------------aag---a
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           17992 10 -     45317 tgagac-----------------aag---a
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25650 10 -     42441 tgagac-----------------aag---a
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28326 10 -     29113 tgagac-----------------aag---a
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31403 10 -     48123 tgagac-----------------aag---a
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51625 19 +     77746 AGTGAAAC---T-G-C-T-A-TGAAG---T
i Sigmodon_hispidus.SigHis_scaffold_20193                I 19 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1865776 21 -   1910179 AATGGAGCT-AT-G-CCA-G--GTAG---T
i Solenodon_paradoxus.SolPar_flattened_line_126          I 21 C 0
s Sorex_araneus.JH798187.1                                 4672886 24 +  18376816 Tacaga----attttgaa-a-taaaatatt
i Sorex_araneus.JH798187.1                               I 21 C 0
s Spermophilus_dauricus.KZ294078.1                         1870395 21 +   3870691 AATGGAAC---T-GTGCT-G-TAAAG---T
i Spermophilus_dauricus.KZ294078.1                       I 24 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525              8408 21 -     97271 AACGGA-CC--T-GTGTT-G-TGAAG---T
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 21 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126581 21 +    196729 AATGGATC---T-GTGCT-G-TGAAG---T
i Suricata_suricatta.SurSur_flattened_line_6629          I 26 C 0
s Sus_scrofa.CM000828.4                                    6645624 21 +  69701581 AATGGAAC---T-GTGCT-G-TGAAG---T
i Sus_scrofa.CM000828.4                                  I 21 C 0
s Symphalangus_syndactylus.tarseq_199                       393498 10 +   1523678 tgagga-----------------aag---a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15949 21 +     22964 AATGGAAC---T-GTGCT-A-TGAAG---T
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 21 C 0
s Tamandua_tetradactyla.TamTet_scaffold_224794                4763 21 +      5583 AATGGAACG-AT-GTC---A-TGAAG---C
i Tamandua_tetradactyla.TamTet_scaffold_224794           I 410 N 0
s Tapirus_indicus.TapInd_scaffold_7432                      193310 21 +    199430 AATGGAAC---T-GTGCT-G-TGAAG---T
i Tapirus_indicus.TapInd_scaffold_7432                   I 21 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    107278 21 -    539355 AATGGAAC---T-GTGCT-G-TGAAG---T
i Tapirus_terrestris.TapTer_scaffold_755                 I 21 C 0
s Tarsius_lariang.k141_1733899                                2646  9 +      9917 -AATGA-----------------AAC---T
i Tarsius_lariang.k141_1733899                           I 21 C 0
s Tarsius_wallacei.k141_226975                                9445  9 +     20590 -AATGA-----------------AAC---T
i Tarsius_wallacei.k141_226975                           I 21 C 0
s Theropithecus_gelada.CM009954.1                           355656 10 - 186847797 TGAGAC-----------------AAG---A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26230 21 -     33621 AATAAAAAC-GTT--C-T-G-TGAAG---T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 20 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   21308 21 -     31044 AATGAAAC---T-GGGTT-G-TGAAA---T
i Tolypeutes_matacus.TolMat_scaffold_31955               I 21 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    481819 21 -    610378 AGGGGA-CC--T-GTGCT-A-AGAGG---T
i Tonatia_saurophila.TonSau_scaffold_294                 I 21 C 0
s Trachypithecus_auratus.k141_1189070                        23402 10 +     26378 tgagac-----------------aag---a
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36201 10 -     78344 tgagac-----------------aag---a
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22727 10 +     25722 tgagac-----------------aag---a
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31157 10 -     62838 tgagac-----------------aag---a
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31148 10 +     46913 tgagac-----------------aag---a
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11885 10 -     28527 tgagac-----------------aag---a
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33092 10 -     64340 tgagac-----------------aag---a
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31130 10 -     63452 tgagac-----------------aag---a
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12577 10 +     22490 tgagac-----------------aag---a
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          543 10 +      9911 tgagac-----------------aag---a
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          338 10 -     33539 tgagac-----------------aag---a
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258097 10 -   6242583 tgagac-----------------aag---a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4116 10 +     19340 tgagac-----------------aag---a
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175558 21 -    200418 TGTGGAA---GT-GTACA-G-TGAAG---T
i Tragulus_javanicus.TraJav_scaffold_3462                I 21 C 0
s Trichechus_manatus.JH594705.1                            6483339 21 -  10818551 AATGGAAC---T-G-CGCTG-TGAAG---T
i Trichechus_manatus.JH594705.1                          I 21 C 0
s Tupaia_chinensis.KB320699.1                              1837351 21 -   4065304 AGCAGA----GTTGTGCT-G-TGAAG---A
i Tupaia_chinensis.KB320699.1                            I 16 C 0
s Tupaia_tana.TupTan_flattened_line_394                      11402 21 -     70247 AGTAGA----GTTGGGCT-G-TGAAG---A
i Tupaia_tana.TupTan_flattened_line_394                  I 16 C 0
s Tursiops_truncatus.MRVK01000835.1                       17367437 21 -  33153633 AATGGAAC---T-GTGCT-G-TGAAG---T
i Tursiops_truncatus.MRVK01000835.1                      I 21 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    5237 21 -     21056 AATGAAAC---T-GTGCT-G-AGAAG---T
i Uropsilus_gracilis.UroGra_scaffold_46687               I 21 C 0
s Ursus_maritimus.KK499267.1                                183772 21 +   5085361 ATTGGA-CC--T-GTGCT-G-TGAAG---T
i Ursus_maritimus.KK499267.1                             I 21 C 0
s Vicugna_pacos.KN270157.1                                   77966 21 +   5488506 AAGGGAAC---T-GTGCT-G-TGACG---T
i Vicugna_pacos.KN270157.1                               I 21 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                106695 21 -    112863 AACGGAAC---T-GTGCT-G-TGAAG---T
i Vulpes_lagopus.VulLag_flattened_line_12041             I 21 C 0
s Xerus_inauris.XerIna_scaffold_2302                        176126 21 -    224448 AATGGAAC--TTTG-C-T-G-TAAAG---T
i Xerus_inauris.XerIna_scaffold_2302                     I 20 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30771 21 -     86975 AATGGATC---T-GTGCT-G-TGAAG---T
i Zalophus_californianus.ZalCal_flattened_line_17732     I 21 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1538 21 -      1899 CATGCAAC---T-GTACT-G-TGAGC---T
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 19 C 0
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Elephantulus_edwardii.JH947257.1                         1227257 63261 +  10337057 T
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Anoura_caudifer.AnoCau_scaffold_1412                      178536  2 -    412891 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9463 5 +     36723 a---ctca
s Acinonyx_jubatus.LLWD01001279.1                           814560 4 +   1699592 A---TT-A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     27818 4 +     63021 T---TC-A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 4
s Ailuropoda_melanoleuca.LNAT01000098.1                   20417229 4 +  29979442 A---TT-A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            217349 2 +    347723 A---T---
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    20124 4 -     61208 A---TC-A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 4
s Allenopithecus_nigroviridis.k141_3755588                   50415 5 +     53615 a---ctca
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2442 5 +     13857 a---ctca
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         18997 5 -     21945 a---ctca
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20682 5 +     32033 a---ctca
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73939 5 -     84148 T---Ttca
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46177 5 -     78289 T---Ttca
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45604 5 +     55831 t---ttca
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44067 5 -     64179 T---Ttca
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1175 5 -      3959 T---Ttca
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42692 5 +     45454 T---Ttca
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48341 5 +     70886 T---Ttca
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10514 5 +     30854 T---Ttca
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34648 5 +     42133 T---Ttca
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587927 4 +   2318259 A---TT-A
i Ammotragus_lervia.NIVO01071767.1                       I 513 I 4
s Anoura_caudifer.AnoCau_scaffold_1412                      178538 4 -    412891 a---tt-a
i Anoura_caudifer.AnoCau_scaffold_1412                   I 2 I 4
s Aotus_azarae.k141_887050                                    2881 5 +     17741 T---Ttca
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3506 5 -     15923 T---Ttca
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673788 5 +   5030052 t---ttca
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3782 5 -     16391 T---Ttca
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3341 5 -     17186 T---Ttca
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25949 4 -     32367 A---TC-A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 4
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  7061 4 -     15198 A---TT-A
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 4
s Ateles_geoffroyi_b.tarseq_1536                               276404 5 +  21539123 T---Ttca
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12570 5 +     48076 T---Ttca
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7705 5 -     28759 T---Ttca
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35261 5 +     44353 T---Ttca
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50630 5 -     71267 T---Ttca
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24688 5 -     33135 T---Ttca
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7965181 4 -  23207421 G---TT-A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 4
s Balaenoptera_bonaerensis.DF411050.1                         1681 4 -     25979 G---TT-A
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 4
s Beatragus_hunteri.BeaHun_scaffold_7278                     88927 4 +    124022 A---TT-A
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 506 I 4
s Bison_bison.KN261452.1                                     24469 4 +    288883 a---TT-A
i Bison_bison.KN261452.1                                 I 519 I 4
s Bos_indicus.CM003047.1                                  20358859 4 +  48749331 a---TT-A
i Bos_indicus.CM003047.1                                 I 519 I 4
s Bos_mutus.JH880303.1                                      757423 4 +   1948126 a---TT-A
i Bos_mutus.JH880303.1                                   I 519 I 4
s Bos_taurus.CM000203.6                                   27547565 4 -  45695690 a---TT-A
i Bos_taurus.CM000203.6                                  I 519 I 4
s Bubalus_bubalis.KI419123.1                               1532573 4 -   4408762 a---TT-A
i Bubalus_bubalis.KI419123.1                             I 519 I 4
s Cacajao_ayresi.k141_96119                                   9494 5 +     28062 T---Ttca
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44788 5 -     91139 T---Ttca
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22314 5 +     95584 T---Ttca
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22227 5 +    119600 T---Ttca
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11879 5 +     18648 T---Ttca
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11392 5 -     13885 T---TTCa
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3485 5 -      8861 T---Ttca
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455874 5 + 189096842 T---Ttca
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3396 5 +      8664 T---Ttca
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632651 4 +  17673402 A---TT-A
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           4666938 4 +   7040546 A---TT-A
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                 1210596 4 +   1652518 A---TT-A
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           42506917 4 +  60362399 G---TT-A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10553 4 -     23171 G---TT-A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          223896 4 +   9314153 G---TT-A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41617031 4 +  59632846 G---TT-A
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45108612 4 -  63665305 G---TT-A
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27411856 4 -  46296322 A---TT-A
i Capra_aegagrus.CM003241.1                              I 513 I 4
s Capra_hircus.CM004588.1                                 26593930 4 +  44709034 A---TT-A
i Capra_hircus.CM004588.1                                I 513 I 4
s Capromys_pilorides.CapPil_scaffold_762519                   1460 4 -      1607 G---GT-A
i Capromys_pilorides.CapPil_scaffold_762519              C 0 I 4
s Carlito_syrichta.NW_007259797.1                           272768 5 +    496798 C---TGct
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               1931 4 +      9923 A---TT-A
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 4
s Castor_canadensis.CasCan_scaffold_39952                    29659 4 -     39886 G---TT-A
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                     81244 4 -    217609 G---TT-A
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 4
s Cavia_aperea.AVPZ01000300.1                              4998346 4 +  23392119 a---tt-a
i Cavia_aperea.AVPZ01000300.1                            C 0 I 4
s Cavia_porcellus.DS562891.1                               5001788 4 +  23407841 a---tt-a
i Cavia_porcellus.DS562891.1                             C 0 I 4
s Cavia_tschudii.CavTsc_scaffold_23560                       64867 4 -     66877 A---TT-A
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 4
s Cebuella_niveiventris.k141_592277                           6795 5 -     12580 T---Ttca
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44853 5 +     53515 T---Ttca
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374606 5 -  26074798 T---Ttca
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9663 5 -     34880 T---Ttca
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68759 5 -     89041 T---Ttca
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4727 5 -      5494 C---TGCT
i Cephalopachus_bancanus.k141_1689090                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15493864 4 -  27778364 A---TT-A
i Ceratotherium_simum.JH767749.1                         C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20697 4 +     27315 A---TT-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 4
s Cercocebus_atys.KQ010504.1                                143498 5 -   4669795 A---CTCA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47237 5 +     47900 a---ctca
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2670 5 -     14410 a---ctca
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47052 5 -    148725 a---ctca
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29330 5 -     40656 a---ctca
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9289 5 +     20796 a---ctca
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14403 5 -     17524 a---ctca
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30135 5 -     34525 a---ctca
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13915 5 -     25376 a---ctca
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366502 5 -  39242232 a---ctca
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272229 5 +  21565898 a---ctca
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34594 5 -     45857 a---ctca
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29495 5 -     32606 a---ctca
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5658 5 +      8499 a---ctca
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28057 5 +     70610 a---ctca
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25017 5 +     36323 a---ctca
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            14235 4 -     19938 G---TT-A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 4
s Cheracebus_lucifer.k141_2312002                            10600 5 -     32913 T---Ttca
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21013 5 -     40346 T---Ttca
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21268 5 +    216457 T---Ttca
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21057 5 +     39636 T---Ttca
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240686 4 -   2543920 A---TA-A
i Chinchilla_lanigera.JH722012.1                         C 0 I 4
s Chiropotes_albinasus.k141_1091259                          33031 5 -     52013 T---Ttca
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44128 5 -    112038 T---Ttca
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9679 5 +     34062 T---Ttca
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345917 5 +  18827391 a---ctca
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12456 5 -     44032 a---ctca
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307303 5 - 135778131 a---ctca
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  885 2 +     10270 -----T-A
i Choloepus_didactylus.ChoDid_scaffold_147047            I 1 I 4
s Choloepus_hoffmanni.KN194906.1                            608361 2 -    839153 -----T-A
i Choloepus_hoffmanni.KN194906.1                         I 1 I 4
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                309 4 -      4087 G---TT-A
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 I 4
s Colobus_angolensis.KN981557.1                             411716 5 -   2368649 a---ctca
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381598 5 - 200372422 a---ctca
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5155 5 -     84244 a---ctca
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808591 3 +  53390261 A---CT--
i Condylura_cristata.JH655891.1                          C 0 I 5
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4627 3 -      8242 A---TT--
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 5
s Cricetomys_gambianus.CriGam_scaffold_14425                 46383 4 -     83289 A---TC-A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 4
s Cricetulus_griseus.LT883664.1                          213118158 4 - 224834208 A---TC-A
i Cricetulus_griseus.LT883664.1                          C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129              6015 4 +     87169 A---TT-A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    647363 4 -   1526836 A---TT-A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 4
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20530 4 +     50838 A---TT-A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 4
s Cuniculus_paca.CunPac_flattened_line_7025                   9068 4 +     36344 A---TT-A
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 4
s Dasyprocta_punctata.DasPun_flattened_line_15900            30078 4 +     75252 A---TT-A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 4
s Dasypus_novemcinctus.JH564415.1                          2111608 4 -   2246927 G---TT-A
i Dasypus_novemcinctus.JH564415.1                        C 0 I 4
s Delphinapterus_leucas.KZ290073.1                        18633587 4 -  35494412 G---TT-A
i Delphinapterus_leucas.KZ290073.1                       C 0 I 4
s Desmodus_rotundus.KZ672289.1                            11866918 4 -  20541912 A---TT-A
i Desmodus_rotundus.KZ672289.1                           C 0 I 4
s Dicerorhinus_sumatrensis.PEKH010002091.1                  666136 4 -   1390856 A---TT-A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 4
s Diceros_bicornis.DicBicMic_scaffold_5955                  140936 4 -    198055 A---TT-A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 4
s Dinomys_branickii.DinBra_scaffold_10381                   100760 4 -    115145 A---TT-A
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 4
s Dipodomys_ordii.KN672350.1                              18952498 4 -  37912305 G---TT-A
i Dipodomys_ordii.KN672350.1                             C 0 I 5
s Dipodomys_stephensi.DipSte_scaffold_89095                   7410 4 -     10735 G---TT-A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 5
s Dolichotis_patagonum.DolPat_scaffold_80628                 11164 4 +     14636 A---TT-A
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 4
s Echinops_telfairi.JH980293.1                            62857097 4 - 111700974 G---TT-C
i Echinops_telfairi.JH980293.1                           C 0 I 4
s Eidolon_helvum.AWHC01266696.1                               7937 2 +     19438 A---T---
i Eidolon_helvum.AWHC01266696.1                          C 0 I 3
s Elaphurus_davidianus.JRFZ01104969.1                       242296 4 -    607251 A---TT-A
i Elaphurus_davidianus.JRFZ01104969.1                    I 525 I 4
s Ellobius_lutescens.LOEQ01008920.1                          34034 4 +    110024 A---TC-A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 2
s Ellobius_talpinus.LOJH01026522.1                           15970 4 +     18970 A---TC-A
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 2
s Enhydra_lutris.KZ291758.1                               24917765 4 +  41312741 G---TT-A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12580512 4 +  14770903 A---TT-A
i Eptesicus_fuscus.JH977646.1                            C 0 I 4
s Equus_asinus.JREZ01000139.1                              3043084 4 -   4378816 G---TT-A
i Equus_asinus.JREZ01000139.1                            C 0 I 4
s Equus_caballus.CM000403.2                               21377023 4 +  39960074 G---TT-A
i Equus_caballus.CM000403.2                              C 0 I 4
s Equus_przewalskii.KK951119.1                              413005 4 -    498745 G---TT-A
i Equus_przewalskii.KK951119.1                           C 0 I 4
s Erinaceus_europaeus.JH835339.1                           3668072 3 +   7059049 G---TT--
i Erinaceus_europaeus.JH835339.1                         C 0 I 2
s Erythrocebus_patas.Contig38                               265445 5 +  21539334 a---ctca
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72795 4 -    133382 G---TT-A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 4
s Eubalaena_japonica.EubJap_flattened_line_57114               508 4 +     25849 G---TT-A
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 I 4
s Felis_catus.CM001381.2                                 186248470 4 - 206538554 A---TT-A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185118256 4 - 205367284 A---TT-A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_31944                 29356 4 -     30238 A---TT-A
i Felis_nigripes.FelNig_flattened_line_31944             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2924111 4 -   3816255 A---TT-A
i Fukomys_damarensis.KN121974.1                          C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_51812                3401 4 -     28519 A---GT-A
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S015573.1                      94008 4 -     95226 a---TT-A
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 519 I 4
s Glis_glis.GliGli_scaffold_163929                            3293 4 -      6791 A---TT-A
i Glis_glis.GliGli_scaffold_163929                       C 0 I 4
s Gorilla_beringei.k141_3218903                                214 5 -      2763 a---ctca
i Gorilla_beringei.k141_3218903                          C 0 I 32
s Gorilla_gorilla.LT578341.1                                258635 5 - 186649187 a---ctca
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    4360 4 -     78134 A---TC-A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 4
s Helogale_parvula.HelPar_flattened_line_2585                32452 4 -    327341 A---TT-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 11665 4 +     48891 A---TT-A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 511 I 4
s Heterocephalus_glaber.JH602082.1                         1934499 4 -  22651954 A---TT-A
i Heterocephalus_glaber.JH602082.1                       C 0 I 4
s Heterohyrax_brucei.HetBruBak_scaffold_116546                2032 4 +      8654 G---TC-A
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 I 4
s Hippopotamus_amphibius.HipAmp_scaffold_38803                9282 3 -     36432 G---TT--
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 2
s Hipposideros_armiger.JXIK01000431.1                      1553292 3 -   1711038 A---TT--
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 5
s Hipposideros_galeritus.HipGal_scaffold_790763                198 3 +       338 A---TG--
i Hipposideros_galeritus.HipGal_scaffold_790763          n 8 n 8
s Hoolock_leuconedys.ctg274                                    145103 5 -    630532 a---ctca
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71807 4 +     83186 G---TT-A
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73747 4 +    143317 A---TT-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 4
s Hylobates_agilis.k141_1155965                               8149 5 +     12352 a---ctca
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15336 5 +     55766 a---ctca
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054864 5 + 191637585 a---ctca
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803742 5 +  11177569 a---ctca
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9665 4 -    135385 A---TT-A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 4
s Ictidomys_tridecemlineatus.JH393364.1                     388848 4 +   7955117 G---TT-A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 4
s Inia_geoffrensis.IniGeo_flattened_line_69447               11690 4 -     16823 G---TT-A
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 4
s Jaculus_jaculus.JH725527.1                               1241673 4 +   9596543 A---TC-A
i Jaculus_jaculus.JH725527.1                             C 0 I 4
s Kogia_breviceps.KogBre_flattened_line_3970                 73531 4 -     97402 G---TT-A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 4
s Lagothrix_lagothricha.k141_246028                          44955 5 +    110728 T---Ttca
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64802 4 -     65777 A---TT-A
i Lasiurus_borealis.LasBor_scaffold_16567                C 0 I 1
s Leontocebus_fuscicollis.k141_3470480                         436 5 -     23187 T---Ttca
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            749 5 -     14280 T---Ttca
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         392 5 +      3713 T---Ttca
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      582 5 +      8855 T---Ttca
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5384 5 -     13645 T---Ttca
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        815152 4 -   3914936 A---TT-C
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     19914 4 +     24238 A---TT-A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 4
s Lipotes_vexillifer.KE559953.1                             342875 4 +    662738 G---TT-A
i Lipotes_vexillifer.KE559953.1                          C 0 I 4
s Lophocebus_aterrimus.ctg367                               336380 5 -   1826925 a---ctca
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086678 4 +  43346337 G---TT-A
i Loxodonta_africana.GL010049.1                          C 0 I 4
s Lycaon_pictus.CM007581.1                                41616186 4 +  59628241 G---TT-A
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              47772 5 -     61512 a---ctca
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375434 5 -  60120075 a---ctca
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27702 5 +     30207 a---ctca
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2540 5 -      5035 a---ctca
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27655 5 +     30527 a---ttca
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38831 5 -     50087 a---ctca
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48576 5 +     51645 a---ctca
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417778 5 - 187317192 a---ctca
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402009 5 +  25927173 a---ctca
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51180 5 -     62418 a---ctca
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3711 5 +     14901 a---ctca
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47653 5 +     59329 a---ctca
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273560 5 +    668171 a---ctca
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2192 5 -      5049 a---ctca
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5358 5 +     17132 a---ctca
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224879 2 -    270270 A---T---
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 3
s Mandrillus_leucophaeus.scaffold280                        324848 5 +  24302211 a---ctca
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359679 5 -    752769 a---ctca
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675200 4 -    737560 A---TT-A
i Manis_javanica.JSZB01003497.1                          C 0 I 4
s Manis_pentadactyla.KN006162.1                             222500 4 +    317179 A---TT-A
i Manis_pentadactyla.KN006162.1                          C 0 I 4
s Marmota_marmota.CZRN01000018.1                           7503061 4 +  40650429 t---tt-a
i Marmota_marmota.CZRN01000018.1                         C 0 I 4
s Megaderma_lyra.MegLyr_scaffold_4542                       152225 3 +    207569 A---TT--
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_19308             27915 4 -     74585 G---TT-A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 52384 4 -    140813 A---TC-A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 4
s Mesocricetus_auratus.KB708134.1                         17431718 4 +  29670104 A---TC-A
i Mesocricetus_auratus.KB708134.1                        C 0 I 4
s Mesoplodon_bidens.MesBid_scaffold_6114                     89159 4 +     93471 G---TT-A
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 4
s Mico_argentatus.k141_582562                                11978 5 +     17804 T---Ttca
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12478 5 -     12984 T---Ttca
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20797 5 -     26561 T---Ttca
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48299 4 +    145209 G---TT-A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 4
s Micronycteris_hirsuta.MicHir_scaffold_2233                186711 4 +    200668 A---GT-A
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 4
s Microtus_ochrogaster.CM001695.1                         15965460 4 +  27267610 A---TC-A
i Microtus_ochrogaster.CM001695.1                        C 0 I 2
s Miniopterus_natalensis.LDJU01000034.1                    6364853 4 -   8254450 A---TT-A
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 4
s Miniopterus_schreibersii.MinSch_scaffold_23309             43777 4 -     48117 A---TT-A
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 4
s Miopithecus_ogouensis.k141_1534655                         24946 5 -     27822 a---ctca
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        10163 4 +     27589 A---TT-C
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   361264 4 +    437263 G---TT-A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 4
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180940 4 +    366855 A---TT-A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 4
s Moschus_moschiferus.MosMos_scaffold_13123                  28110 4 -     82753 A---TT-A
i Moschus_moschiferus.MosMos_scaffold_13123              I 514 I 4
s Mungos_mungo.MunMun_flattened_line_18455                   20180 4 -     63510 A---TT-A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          42810 4 +     47283 A---TT-A
i Murina_feae.MurFea_scaffold_17764                      C 0 I 4
s Mus_caroli.LT608237.1                                   35596638 4 + 120012414 A---TC-A
i Mus_caroli.LT608237.1                                  C 0 I 4
s Mus_musculus.chr8                                       41690177 4 + 129401213 A---TC-A
i Mus_musculus.chr8                                      C 0 I 4
s Mus_pahari.LT608297.1                                   58218123 4 +  89631738 A---TC-A
i Mus_pahari.LT608297.1                                  C 0 I 4
s Mus_spretus.CM004101.1                                  39499096 4 + 130317789 A---TC-A
i Mus_spretus.CM004101.1                                 C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_5560               1373 4 -    124358 G---TC-A
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 I 4
s Mustela_putorius.JH418006.1                             14356779 4 +  14710649 G---TT-A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_93829                      4585 4 +     14880 G---TT-A
i Myocastor_coypus.MyoCoy_scaffold_93829                 C 0 I 4
s Myotis_brandtii.KE162005.1                               9795077 4 +  10118263 A---TT-A
i Myotis_brandtii.KE162005.1                             C 0 I 4
s Myotis_davidii.KB100139.1                                4389251 4 +   6019432 A---TT-A
i Myotis_davidii.KB100139.1                              C 0 I 4
s Myotis_lucifugus.GL429869.1                               385279 4 +   4330536 A---TT-A
i Myotis_lucifugus.GL429869.1                            C 0 I 4
s Myotis_myotis.MyoMyo_scaffold_66571                         4064 4 +     18357 A---TT-A
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121785 4 +    130748 A---TT-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           C 0 I 4
s Nannospalax_galili.KL204047.1                             948281 4 +   3037898 A---TC-A
i Nannospalax_galili.KL204047.1                          C 0 I 4
s Nasalis_larvatus.k141_1350636                              31725 5 +     34575 a---ctca
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233930 4 -   7148211 G---TT-A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 4
s Noctilio_leporinus.NocLep_scaffold_7894                   129548 4 -    149072 A---TT-A
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 4
s Nomascus_annamensis.k141_1771965                           56037 5 -    132029 a---ctca
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12132 5 -     16345 a---ctca
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18021 5 +     22201 a---ctca
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416251 5 -  22158432 a---ctca
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28426 5 -     54323 a---ctca
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199782 4 +   9404916 G---TT-A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11057140 4 -  11899542 G---TT-A
i Octodon_degus.JH651603.1                               C 0 I 4
s Odobenus_rosmarus.KB229312.1                             1453580 4 +   2017862 A---TT-A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         439209 4 -    630418 a---tt-g
i Odocoileus_virginianus.KZ100018.1                      I 523 I 5
s Okapia_johnstoni.LVCL01S0005463.1                          17089 4 +    150152 a---tT-A
i Okapia_johnstoni.LVCL01S0005463.1                      I 519 I 4
s Ondatra_zibethicus.OndZib_scaffold_7387                    96078 4 -    140218 A---TC-A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 2
s Onychomys_torridus.OnyTor_scaffold_28377                    6657 4 -     41509 A---CC-A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 4
s Orcinus_orca.KB316932.1                                  8104333 4 +  10937097 G---TT-A
i Orcinus_orca.KB316932.1                                C 0 I 4
s Orycteropus_afer.OryAfe_flattened_line_201229               1564 4 +     11607 A---TT-A
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 I 4
s Oryctolagus_cuniculus.CM000791.1                       107106570 7 - 174332312 attatt-a
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 4
s Otocyon_megalotis.JAEUCK010005147.1                        40828 4 +    559221 G---TT-A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26406792 4 -  44047080 A---TT-C
i Ovis_aries.CM001607.2                                  I 511 I 4
s Ovis_canadensis.OviCan_scaffold_67953                       7309 4 +     17875 A---TT-C
i Ovis_canadensis.OviCan_scaffold_67953                  I 509 I 4
s Pan_paniscus.AJFE02004363.1                                   31 5 +      1263 A---CGCa
i Pan_paniscus.AJFE02004363.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1476618 5 - 189151597 A---CTCA
i Pan_troglodytes.CM009242.2                             I 10 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   26179 4 -    230217 A---TT-A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18463505 4 -  18783137 A---TT-A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3974164 4 +   8748460 A---TT-A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1618318 4 +   2937107 A---TT-A
i Pantholops_hodgsonii.KE114653.1                        I 512 I 4
s Papio_anubis.CM001495.2                                   245857 5 - 183742232 a---ctca
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12142 5 +     21308 a---ctca
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294885 5 -  20919399 a---ctca
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24782 5 -     27687 a---ctca
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1461 5 +     10553 a---ctca
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1421 5 -     10386 a---ctca
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16759 4 +     78924 A---TT-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        3882 4 +      9367 A---TT-A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 4
s Peromyscus_maniculatus.KI615324.1                         249863 4 +  18517816 A---TC-A
i Peromyscus_maniculatus.KI615324.1                      C 0 I 4
s Petromus_typicus.PetTyp_scaffold_17301                     34036 4 -     56120 A---TT-A
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 4
s Phocoena_phocoena.PhoPho_flattened_line_24159               5858 4 -     63832 G---TT-A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 4
s Piliocolobus_badius.k141_2704958                            5103 5 +     55023 a---ctca
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4625 5 -     89929 a---ctca
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5215 5 +     40849 a---ctca
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256945 5 +  14605196 a---ctca
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5637 4 +     22231 A---TT-A
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 4
s Pithecia_albicans.k141_1239476                             66496 5 +    207309 T---Ttca
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7584 5 -     25401 T---Ttca
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33332 5 +     58159 T---Ttca
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33608 5 +     63561 T---Ttca
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33368 5 +     51148 T---Ttca
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558338 5 -   4542175 T---Ttca
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33352 5 +     51125 T---Ttca
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2877 4 +     19503 G---TT-A
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 4
s Plecturocebus_bernhardi.k141_2549090                        9769 5 +     39866 T---Ttca
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4851 5 -      9282 T---Ttca
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44255 5 -     87950 T---Ttca
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44649 5 -     88961 T---Ttca
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9347 5 -     39403 T---Ttca
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44298 5 +     87928 T---Ttca
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9346 5 -     60166 T---Ttca
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16267 5 -     67232 t---ttca
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44199 5 -     90634 T---Ttca
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45666 5 +     89403 T---Ttca
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181797 5 - 189387572 A---CTCA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196540 5 -   9816681 a---ctca
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30305 5 +     69807 a---ctca
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47486 5 -     80239 a---ctca
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 6023 4 +      7663 G---TC-A
i Procavia_capensis.ProCapCap_scaffold_165387            C 0 I 4
s Psammomys_obesus.NESX01036366.1                            39921 4 +     52041 G---TC-A
i Psammomys_obesus.NESX01036366.1                        C 0 I 4
s Pteronotus_parnellii.KE847780.1                            53848 4 -     66298 A---TT-A
i Pteronotus_parnellii.KE847780.1                        C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6363 4 -     18639 G---TT-A
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5842489 2 -  28871421 A---T---
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Pteropus_vampyrus.KN525825.1                             3539004 2 -   4952924 A---G---
i Pteropus_vampyrus.KN525825.1                           C 0 I 3
s Puma_concolor.QAVW01001104.1                            18100819 4 +  38429054 A---TT-A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29672 5 +     91421 a---ctca
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156224 5 -   7812017 a---ctca
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10529 5 +     72585 a---ctca
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  1247 4 -     55207 A---TT-A
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 517 I 4
s Rattus_norvegicus.chr16                                 37024821 4 -  90668790 A---TC-A
i Rattus_norvegicus.chr16                                C 0 I 4
s Rhinolophus_sinicus.LVEH01000134.1                       2916444 3 +   3329780 A---TG--
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 5
s Rhinopithecus_bieti.k119_778604                             4134 5 +      7119 a---ctca
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124804 5 + 195417433 a---ctca
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238976 5 -   7961872 a---ctca
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76989 2 -    116970 A---T---
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 3
s Saguinus_bicolor.k141_161125                                8927 5 +     12412 T---Ttca
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               388 5 +      9876 T---Ttca
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            15991 5 -     24931 T---Ttca
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                                871 5 +      4564 T---Ttca
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3676 5 -      7443 T---Ttca
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394582 5 - 209938924 T---Ttca
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1291 5 +     10149 T---Ttca
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                631 5 +     10417 T---Ttca
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       10768 4 +     16473 A---TT-G
i Saiga_tatarica.SaiTat_scaffold_39512                   I 805 I 4
s Saimiri_boliviensis.NW_024100920.1                       1110754 5 + 121099817 t---ttca
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32321 5 -     47369 T---Ttca
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32707 5 -     79414 T---Ttca
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29398 5 -     34454 T---Ttca
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16799 5 -     22428 T---Ttca
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31953 5 -     47109 T---Ttca
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239983 5 +   5703754 T---Ttca
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9573 5 +     21866 T---Ttca
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    117285 3 +    313613 A---TT--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 5
s Semnopithecus_entellus.k141_583282                          1111 5 +     11297 a---ctca
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31504 5 +     58920 a---ctca
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18002 5 -     45317 a---ctca
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25660 5 -     42441 a---ctca
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28336 5 -     29113 a---ctca
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31413 5 -     48123 a---ctca
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51644 4 +     77746 A---TC-A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 4
s Solenodon_paradoxus.SolPar_flattened_line_126            1865797 3 -   1910179 A---TT--
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 2
s Sorex_araneus.JH798187.1                                 4672910 3 +  18376816 a---ga--
i Sorex_araneus.JH798187.1                               C 0 I 2
s Spermophilus_dauricus.KZ294078.1                         1870416 4 +   3870691 A---TT-A
i Spermophilus_dauricus.KZ294078.1                       C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_13525              8429 4 -     97271 A---TT-A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             126602 4 +    196729 A---TT-A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6645645 4 +  69701581 G---TT-A
i Sus_scrofa.CM000828.4                                  C 0 I 4
s Symphalangus_syndactylus.tarseq_199                       393508 5 +   1523678 a---ctca
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15970 4 +     22964 A---TT-A
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 4
s Tamandua_tetradactyla.TamTet_scaffold_667533                 304 4 +      1238 A---TT-A
i Tamandua_tetradactyla.TamTet_scaffold_667533           N 0 I 4
s Tapirus_indicus.TapInd_scaffold_7432                      193331 4 +    199430 A---TT-A
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 4
s Tapirus_terrestris.TapTer_scaffold_755                    107299 4 -    539355 A---TT-A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 4
s Tarsius_lariang.k141_1733899                                2655 5 +      9917 A---TGCT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                                9454 5 +     20590 A---TGCT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355666 5 - 186847797 A---CTCG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26251 4 -     33621 A---TT-A
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 4
s Tolypeutes_matacus.TolMat_scaffold_31955                   21329 4 -     31044 G---TT-A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 4
s Tonatia_saurophila.TonSau_scaffold_294                    481840 4 -    610378 A---TT-A
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 4
s Trachypithecus_auratus.k141_1189070                        23412 5 +     26378 a---ctca
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36211 5 -     78344 a---ctca
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22737 5 +     25722 a---ctca
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31167 5 -     62838 a---ctca
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31158 5 +     46913 a---ctca
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11895 5 -     28527 a---ctca
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33102 5 -     64340 a---ctca
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31140 5 -     63452 a---ctca
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12587 5 +     22490 a---ctca
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          553 5 +      9911 a---ctca
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          348 5 -     33539 a---ctca
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258107 5 -   6242583 a---ttca
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4126 5 +     19340 a---ctca
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175579 4 -    200418 A---TT-A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 4
s Trichechus_manatus.JH594705.1                            6483360 4 -  10818551 G---TT-A
i Trichechus_manatus.JH594705.1                          C 0 I 4
s Tupaia_chinensis.KB320699.1                              1837372 4 -   4065304 A---tt-a
i Tupaia_chinensis.KB320699.1                            C 0 I 263
s Tupaia_tana.TupTan_flattened_line_394                      11423 4 -     70247 A---TT-A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 274
s Tursiops_truncatus.MRVK01000835.1                       17367458 4 -  33153633 G---TT-A
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 4
s Uropsilus_gracilis.UroGra_scaffold_46687                    5258 3 -     21056 A---TT--
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 5
s Ursus_maritimus.KK499267.1                                183793 4 +   5085361 A---TT-A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   77987 4 +   5488506 A---TT-A
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_12041                106716 4 -    112863 G---TT-A
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        176147 4 -    224448 A---TT-A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_17732         30792 4 -     86975 A---TT-A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_286923                      1559 4 -      1899 A---TC-A
i Zapus_hudsonius.ZapHud_scaffold_286923                 C 0 I 4
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Elephantulus_edwardii.JH947257.1                         1227257 63261 +  10337057 T
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589 0 -  31847680 C
e Antilocapra_americana.AntAmePen_scaffold_21030             52491 474 -     68529 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9468 32 +     36723 gatgaaa-caaatacaagtttcaagc---tttaaga
s Acinonyx_jubatus.LLWD01001279.1                           814564 13 +   1699592 G-TG----------------TCAAAG---ACTA---
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 1184
s Acomys_cahirinus.AcoCah_scaffold_21377                     27826 13 +     63021 A-TG----------------TCAAAT---TCTT---
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 4 I 831
s Ailuropoda_melanoleuca.LNAT01000098.1                   20417233 13 +  29979442 G-TG----------------TTAAAG---TCTA---
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 833
s Ailurus_fulgens.LNAC01001112.1                            217351 13 +    347723 G-TG----------------TCAAAG---TCTA---
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 709
s Allactaga_bullata.AllBul_scaffold_20030                    20132 13 -     61208 A-TA----------------TAAAAA---TCTA---
i Allactaga_bullata.AllBul_scaffold_20030                I 4 I 639
s Allenopithecus_nigroviridis.k141_3755588                   50420 32 +     53615 gataaaa-caaacacaagtttcaagc---tttaaca
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2447 32 +     13857 gataaaa-caaacacaagtttcaagc---tttaaca
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19002 32 -     21945 gataaaa-caaacacaagtttcaagc---tttaaca
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20687 32 +     32033 gataaaa-caaacacaagtttcaagc---tttaaca
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73944 32 -     84148 aataaaa-caaatacaagtttcaagc---cttaaca
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46182 32 -     78289 aataaaa-caaatacaagtttcaggc---cttaaca
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45609 32 +     55831 aataaaa-caaatacaagtttcaagc---cttaaca
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44072 32 -     64179 aataaaa-caaatacaagtttcatgc---cttaaca
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1180 32 -      3959 aataaaa-caaatacaagtttcatgc---cttaaca
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42697 32 +     45454 aataaaa-caaatacaagtttcaagc---cttaaca
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48346 32 +     70886 aataaaa-caaatacaagtttcaagc---cttaaca
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10519 32 +     30854 aataaaa-caaatacaagtttcaagc---cttaaca
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34653 32 +     42133 aataaaa-caaatacaagtttcaagc---cttaaca
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1587935 13 +   2318259 G-CG----------------TAAAAG---TATA---
i Ammotragus_lervia.NIVO01071767.1                       I 4 I 3222
s Anoura_caudifer.AnoCau_scaffold_1412                      178546 13 -    412891 a-tg----------------tccaag---TCCA---
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 I 641
s Aotus_azarae.k141_887050                                    2886 32 +     17741 gataaaa-caaatacaagtttaaggc---cttaata
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3511 32 -     15923 gataaaa-caaatacaagtttaaggc---cttaata
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673793 32 +   5030052 gataaaa-caaatacaagtttAAGGC---CTTAATA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3787 32 -     16391 gataaaa-caaatacaagtttaaggc---cttaata
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3346 32 -     17186 gataaaa-caaatacaagtttaaggc---cttaata
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      25957 13 -     32367 A-TG----------------TCAAAG---TCTA---
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 4 I 609
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  7069 13 -     15198 A-TG----------------TCCAAG---TCCA---
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 4 I 634
s Ateles_geoffroyi_b.tarseq_1536                               276409 32 +  21539123 aataaaa-caaatacaagtttcaagc---cttaaca
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12575 32 +     48076 aataaaa-caaatacaggtttcaagg---cttaaca
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7710 32 -     28759 aataaaa-caaatacaggtttcaagg---cttaaca
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35266 32 +     44353 aataaaa-caaatacaagtttcaagc---cttaaca
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50635 32 -     71267 aataaaa-caaatacaggtttcaagg---cttaaca
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24693 32 -     33135 aataaaa-caaatacaggtttcaagg---cttaaca
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7965189 13 -  23207421 G-TG----------------TAGAAG---TCCA---
i Balaenoptera_acutorostrata.KI537508.1                  I 4 I 730
s Balaenoptera_bonaerensis.DF411050.1                         1689 13 -     25979 G-TG----------------TAGAAG---TCCA---
i Balaenoptera_bonaerensis.DF411050.1                    I 4 I 730
s Beatragus_hunteri.BeaHun_scaffold_7278                     88935 13 +    124022 G-TG----------------TAAAAG---TCTA---
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 4 I 3220
s Bison_bison.KN261452.1                                     24477 13 +    288883 G-TG----------------TAAAAG---TCTA---
i Bison_bison.KN261452.1                                 I 4 I 10945
s Bos_indicus.CM003047.1                                  20358867 13 +  48749331 G-TG----------------TAAAAG---TCTA---
i Bos_indicus.CM003047.1                                 I 4 I 2769
s Bos_mutus.JH880303.1                                      757431 13 +   1948126 G-TG----------------TAAAAG---TCTA---
i Bos_mutus.JH880303.1                                   I 4 I 2807
s Bos_taurus.CM000203.6                                   27547573 13 -  45695690 G-TG----------------TAAAAG---TCTA---
i Bos_taurus.CM000203.6                                  I 4 I 2769
s Bubalus_bubalis.KI419123.1                               1532581 13 -   4408762 G-TG----------------TAAAAG---TCTA---
i Bubalus_bubalis.KI419123.1                             I 4 I 2770
s Cacajao_ayresi.k141_96119                                   9499 32 +     28062 gataaaa-caaatacaagtttccagc---cttaaca
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44793 32 -     91139 gataaaa-caaatacaagtttccagc---cttaaca
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22319 32 +     95584 gataaaa-caaatacaagtttccagc---cttaaca
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22232 32 +    119600 gataaaa-caaatacaagtttccagc---cttaaca
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11884 32 +     18648 gataaaa-caaataaaagtttcaagc---cttacca
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11397 27 -     13885 gataaa------taaaagtttcaagc---cttaaca
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3490 28 -      8861 gataaaa-caaa----agtttcaagc---cttacca
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455879 32 + 189096842 gataaaa-caaataaaagtttcaagc---cttacca
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3401 31 +      8664 gataaaa-caaataaa-gtttcaagc---cttacca
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7632656 13 +  17673402 G-CG----------------TGAAAG---TCTG---
i Camelus_bactrianus.KN276810.1                          I 1 I 686
s Camelus_dromedarius.KN272107.1                           4666943 13 +   7040546 G-CG----------------TGAAAG---TCTG---
i Camelus_dromedarius.KN272107.1                         I 1 I 700
s Camelus_ferus.KB017975.1                                 1210601 13 +   1652518 G-CG----------------TGAAAG---TCTG---
i Camelus_ferus.KB017975.1                               I 1 I 730
s CanFam4.chr16                                           42506921 11 +  60362399 G-TG----------------TC--AG---TCTA---
i CanFam4.chr16                                          C 0 I 1113
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    10557 11 -     23171 G-TG----------------TC--AG---TCTA---
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 1113
s Canis_lupus_dingo.QKWQ01000480.1                          223900 11 +   9314153 G-TG----------------TC--AG---TCTA---
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1111
s Canis_lupus_familiaris.chr16                            41617035 11 +  59632846 G-TG----------------TC--AG---TCTA---
i Canis_lupus_familiaris.chr16                           C 0 I 1113
s Canis_lupus_orion.HG994398.1                            45108616 11 -  63665305 G-TG----------------TC--AG---TCTA---
i Canis_lupus_orion.HG994398.1                           C 0 I 1113
s Capra_aegagrus.CM003241.1                               27411864 13 -  46296322 G-CG----------------TAAAAG---TATA---
i Capra_aegagrus.CM003241.1                              I 4 I 3295
s Capra_hircus.CM004588.1                                 26593938 13 +  44709034 G-CG----------------TAAAAG---TATA---
i Capra_hircus.CM004588.1                                I 4 I 3218
s Capromys_pilorides.CapPil_scaffold_762519                   1468 13 -      1607 A-TG----------------TCAAAG---TCTA---
i Capromys_pilorides.CapPil_scaffold_762519              I 4 N 0
s Carlito_syrichta.NW_007259797.1                           272773 31 +    496798 g-taaat-tatttataagtGTCAAAG---TCTAATT
i Carlito_syrichta.NW_007259797.1                        C 0 I 687
s Carollia_perspicillata.CarPer_scaffold_107871               1939 13 +      9923 C-TG----------------TCCAAG---TCCA---
i Carollia_perspicillata.CarPer_scaffold_107871          I 4 I 640
s Castor_canadensis.CasCan_scaffold_39952                    29667 13 -     39886 A-TA----------------TCAAAG---TCTA---
i Castor_canadensis.CasCan_scaffold_39952                I 4 I 744
s Catagonus_wagneri.CatWag_scaffold_2839                     81252 13 -    217609 A-TG----------------TAAAAG---TCTT---
i Catagonus_wagneri.CatWag_scaffold_2839                 I 4 I 1018
s Cavia_aperea.AVPZ01000300.1                              4998354 13 +  23392119 a-tg----------------tcAAAG---TCTA---
i Cavia_aperea.AVPZ01000300.1                            I 4 I 844
s Cavia_porcellus.DS562891.1                               5001796 13 +  23407841 a-tg----------------tcAAAG---TCTA---
i Cavia_porcellus.DS562891.1                             I 4 I 843
s Cavia_tschudii.CavTsc_scaffold_23560                       64875 13 -     66877 A-TG----------------TCAAAG---TCTA---
i Cavia_tschudii.CavTsc_scaffold_23560                   I 4 I 841
s Cebuella_niveiventris.k141_592277                           6800 32 -     12580 gataaaa-caaataaaagtttcaagc---cttacca
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44858 32 +     53515 gataaaa-caaataaaagtttcaagc---cttacca
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  374611 28 -  26074798 gagaaaa-caaatacaagtttcaagc---ctt----
i Cebus_albifrons.Contig27                               C 0 I 992
s Cebus_olivaceus.k141_1404781                                9668 32 -     34880 gagaaaa-caaatacaagtttcaagc---cttaaca
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68764 32 -     89041 gagaaaa-caaatacaagtttcaagc---cttaaca
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1689090                         4732 31 -      5494 G-TAAAT-TATTTATAAGTGTCAAAG---TCTAATT
i Cephalopachus_bancanus.k141_1689090                    C 0 N 0
s Ceratotherium_simum.JH767749.1                          15493872 13 -  27778364 G-TG----------------GCAAAC---TCTA---
i Ceratotherium_simum.JH767749.1                         I 4 I 714
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          20705 13 +     27315 G-TG----------------GCAAAC---TCTA---
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 4 I 714
s Cercocebus_atys.KQ010504.1                                143503 32 -   4669795 GATGAAA-CAAACacaagtttcaagc---tttaaca
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47242 32 +     47900 gataaaa-caaacacaagtttcaagc---tttaaca
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2675 32 -     14410 gatgaaa-caaacacaagtttcaagc---tttaaca
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47057 32 -    148725 gatgaaa-caaacacaagtttcaagc---tttaaca
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29335 32 -     40656 gataaaa-caaacacaagtttcaagc---tttaaca
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9294 32 +     20796 gataaaa-caaacacaagtttcaagc---tttaaca
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14408 32 -     17524 gataaaa-caaacacaagtttcaagc---tttaaca
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30140 32 -     34525 gataaaa-caaacacaagtttcaagc---tttaaca
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13920 32 -     25376 gataaaa-caaacacaagtttcaagc---tttaaca
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366507 32 -  39242232 gataaaa-caaacacaagtttcaagc---tttaaca
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272234 32 +  21565898 gataaaa-caaacacaagtttcaagc---tttaaca
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34599 32 -     45857 gataaaa-caaacacaagtttcaagc---tttaaca
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29500 32 -     32606 gataaaa-caaacacaagtttcaagc---tttaaca
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5663 32 +      8499 gataaaa-caaacacaagtttcaagc---tttaaca
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28062 32 +     70610 gataaaa-caaacacaagtttcaagc---tttaaca
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25022 32 +     36323 gataaaa-caaacacaagtttcaagc---tttaaca
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            14243 13 -     19938 A-TA----------------CCAAAG---CCTA---
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 4 I 849
s Cheracebus_lucifer.k141_2312002                            10605 32 -     32913 gataaaa-caaatacaagtttctagc---cttaaca
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21018 32 -     40346 gataaaa-caaatacaagtttctagc---cttaaca
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21273 32 +    216457 gataaaa-caaatacaagtttctagc---cttaaca
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21062 32 +     39636 gataaaa-caaatacaagtttctagc---cttaaca
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1240694 13 -   2543920 A-TG----------------TCAAAG---TCTA---
i Chinchilla_lanigera.JH722012.1                         I 4 I 1403
s Chiropotes_albinasus.k141_1091259                          33036 32 -     52013 gataaaa-caaatacaagtttcaagc---cttaaca
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44133 32 -    112038 gataaaa-caaatacaagtttccagc---cttaaca
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9684 32 +     34062 gataaaa-caaatacaagtttccagc---cttaaca
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345922 32 +  18827391 gataaaa-caaacacaagtttcaagc---tttaaca
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12461 32 -     44032 gataaaa-caaacacaagtttcaagc---tttaaca
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307308 32 - 135778131 gataaaa-caaacacaagtttcaagc---tttaaca
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                  891 13 +     10270 A-TA----------------TCAAAG---TCTA---
i Choloepus_didactylus.ChoDid_scaffold_147047            I 4 I 879
s Choloepus_hoffmanni.KN194906.1                            608367 13 -    839153 A-TA----------------TCAAAG---TCTA---
i Choloepus_hoffmanni.KN194906.1                         I 4 I 876
s Chrysochloris_asiatica.ChrAsi_scaffold_510450                317 13 -      4087 A-TG----------------TCAGAG---TCTA---
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          I 4 I 1490
s Colobus_angolensis.KN981557.1                             411721 32 -   2368649 gataaaa-caaacacaagtttcaagc---tttaaca
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381603 32 - 200372422 gataaaa-caaacacaagtttcaagc---tttaaca
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5160 27 -     84244 gat------aaacacaagtttcaagc---tttaaca
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35808599 12 +  53390261 G-TG----------------TCAAAG---TCA----
i Condylura_cristata.JH655891.1                          I 5 I 1184
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          4635 13 -      8242 G-TG----------------TCAAAG---TCTG---
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 5 I 710
s Cricetomys_gambianus.CriGam_scaffold_14425                 46391 13 -     83289 A-TA----------------TCAAAC---GTTA---
i Cricetomys_gambianus.CriGam_scaffold_14425             I 4 I 616
s Cricetulus_griseus.LT883664.1                          213118166 13 - 224834208 A-TA----------------TCAAAC---Tctc---
i Cricetulus_griseus.LT883664.1                          I 4 I 376
s Cryptoprocta_ferox.CryFer_flattened_line_16129              6019 13 +     87169 G-TG----------------TCAAAG---ACTA---
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 940
s Ctenodactylus_gundi.CteGun_scaffold_65                    647371 13 -   1526836 A-TG----------------TCAAAG---ACTA---
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 4 I 1879
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  20538 13 +     50838 A-TG----------------TCAAAG---TCTA---
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 4 I 1449
s Cuniculus_paca.CunPac_flattened_line_7025                   9076 13 +     36344 A-GG----------------TCAAAG---TCTA---
i Cuniculus_paca.CunPac_flattened_line_7025              I 4 I 1317
s Dasyprocta_punctata.DasPun_flattened_line_15900            30086 13 +     75252 A-TG----------------TCAAAC---TCTA---
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 4 I 730
s Dasypus_novemcinctus.JH564415.1                          2111616 13 -   2246927 A-TA----------------CCAAAG---TCTA---
i Dasypus_novemcinctus.JH564415.1                        I 4 I 834
s Delphinapterus_leucas.KZ290073.1                        18633595 13 -  35494412 G-TG----------------TAAAAG---TCCA---
i Delphinapterus_leucas.KZ290073.1                       I 4 I 730
s Desmodus_rotundus.KZ672289.1                            11866926 13 -  20541912 A-TG----------------TCCAAG---TCCA---
i Desmodus_rotundus.KZ672289.1                           I 4 I 640
s Dicerorhinus_sumatrensis.PEKH010002091.1                  666144 13 -   1390856 G-TG----------------ACAAAC---TCTA---
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 4 I 716
s Diceros_bicornis.DicBicMic_scaffold_5955                  140944 13 -    198055 G-TG----------------GCAAAC---TCTA---
i Diceros_bicornis.DicBicMic_scaffold_5955               I 4 I 714
s Dinomys_branickii.DinBra_scaffold_10381                   100768 13 -    115145 A-TA----------------TCAAAG---TCTA---
i Dinomys_branickii.DinBra_scaffold_10381                I 4 I 1409
s Dipodomys_ordii.KN672350.1                              18952507  6 -  37912305 ------------------------AG---CCCA---
i Dipodomys_ordii.KN672350.1                             I 5 I 1243
s Dipodomys_stephensi.DipSte_scaffold_89095                   7419  6 -     10735 ------------------------AG---CCCA---
i Dipodomys_stephensi.DipSte_scaffold_89095              I 5 I 1240
s Dolichotis_patagonum.DolPat_scaffold_80628                 11172 13 +     14636 A-TG----------------TCAAAG---TGTA---
i Dolichotis_patagonum.DolPat_scaffold_80628             I 4 I 773
s Echinops_telfairi.JH980293.1                            62857105 13 - 111700974 G-GG----------------CCAGAG---TCCA---
i Echinops_telfairi.JH980293.1                           I 4 I 1006
s Eidolon_helvum.AWHC01266696.1                               7942 13 +     19438 G-TG----------------TCAAAG---TCTA---
i Eidolon_helvum.AWHC01266696.1                          I 3 I 727
s Elaphurus_davidianus.JRFZ01104969.1                       242304 13 -    607251 G-TG----------------TAAAAG---TCTA---
i Elaphurus_davidianus.JRFZ01104969.1                    I 4 I 2660
s Ellobius_lutescens.LOEQ01008920.1                          34040  8 +    110024 ----------------------AAAC---TGTA---
i Ellobius_lutescens.LOEQ01008920.1                      I 2 I 687
s Ellobius_talpinus.LOJH01026522.1                           15976  8 +     18970 ----------------------AAAC---TGTa---
i Ellobius_talpinus.LOJH01026522.1                       I 2 I 679
s Enhydra_lutris.KZ291758.1                               24917769 13 +  41312741 G-TG----------------TCAAAG---TGTA---
i Enhydra_lutris.KZ291758.1                              C 0 I 6789
s Eptesicus_fuscus.JH977646.1                             12580520 13 +  14770903 G-TG----------------TCAAAG---TGTA---
i Eptesicus_fuscus.JH977646.1                            I 4 I 696
s Equus_asinus.JREZ01000139.1                              3043092 13 -   4378816 G-TG----------------TCAAGG---TCTA---
i Equus_asinus.JREZ01000139.1                            I 4 I 708
s Equus_caballus.CM000403.2                               21377031 13 +  39960074 G-TG----------------TCAAGG---TCTA---
i Equus_caballus.CM000403.2                              I 4 I 703
s Equus_przewalskii.KK951119.1                              413013 13 -    498745 G-TG----------------TCAAGG---TCTA---
i Equus_przewalskii.KK951119.1                           I 4 I 703
s Erinaceus_europaeus.JH835339.1                           3668077 13 +   7059049 G-TA----------------TGAACA---TTTA---
i Erinaceus_europaeus.JH835339.1                         I 2 I 2092
s Erythrocebus_patas.Contig38                               265450 32 +  21539334 gataaaa-caaacacaagtttcaggc---tttaaca
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           72803 13 -    133382 G-TG----------------TAAAAG---TCCA---
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 4 I 731
s Eubalaena_japonica.EubJap_flattened_line_57114               516 13 +     25849 G-TG----------------TAAAAG---TCCA---
i Eubalaena_japonica.EubJap_flattened_line_57114         I 4 I 731
s Felis_catus.CM001381.2                                 186248474 13 - 206538554 G-TG----------------TCAAAG---ACTA---
i Felis_catus.CM001381.2                                 C 0 I 1277
s Felis_catus_fca126.CM031415.1                          185118260 13 - 205367284 G-TG----------------TCAAAG---ACTA---
i Felis_catus_fca126.CM031415.1                          C 0 I 1447
s Felis_nigripes.FelNig_flattened_line_31944                 29360 13 -     30238 G-TG----------------TCAAAG---ACTA---
i Felis_nigripes.FelNig_flattened_line_31944             C 0 N 0
s Fukomys_damarensis.KN121974.1                            2924118 13 -   3816255 C-CA----------------TCAAAG---TCTA---
i Fukomys_damarensis.KN121974.1                          I 3 I 1059
s Galeopterus_variegatus.GalVar_scaffold_51812                3405 13 -     28519 G-TG----------------TCAAAG---TCCA---
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 I 712
s Giraffa_tippelskirchi.LVKQ01S015573.1                      94016 13 -     95226 T-TG----------------TAAAAG---TCTA---
i Giraffa_tippelskirchi.LVKQ01S015573.1                  I 4 N 0
s Glis_glis.GliGli_scaffold_163929                            3301 13 -      6791 A-TG----------------TCGAAG---TCTA---
i Glis_glis.GliGli_scaffold_163929                       I 4 I 682
s Gorilla_beringei.k141_935316                                 549 32 +     34797 gatgaaa-caaatacaagtttcaagc---tttaaga
i Gorilla_beringei.k141_935316                           I 36 I 40
s Gorilla_gorilla.LT578341.1                                258640 32 - 186649187 gatgaaa-caaatacaagtttcaagc---tttaaga
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    4368 13 -     78134 A-TA----------------TTGAAG---TCTA---
i Graphiurus_murinus.GraMur_scaffold_10447               I 4 I 1448
s Helogale_parvula.HelPar_flattened_line_2585                32456 13 -    327341 A-TG----------------TCATAG---ACTA---
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 907
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 11673 13 +     48891 G-CG----------------TAAAAG---TCTA---
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 4 I 3210
s Heterocephalus_glaber.JH602082.1                         1934507 13 -  22651954 A-TG----------------GTAAAG---TCTA---
i Heterocephalus_glaber.JH602082.1                       I 4 I 3122
s Heterohyrax_brucei.HetBruBak_scaffold_116546                2040 13 +      8654 C-TG----------------TCCGAG---TCCA---
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 4 I 3822
s Hippopotamus_amphibius.HipAmp_scaffold_38803                9287 13 -     36432 G-TA----------------TAAAAG---TCTA---
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 2 I 1075
s Hipposideros_armiger.JXIK01000431.1                      1553300 13 -   1711038 G-TG----------------TCAAAA---TCCA---
i Hipposideros_armiger.JXIK01000431.1                    I 5 I 2088
s Hipposideros_galeritus.HipGal_scaffold_790761                206 13 +       338 G-TG----------------TCGAAA---TCCA---
i Hipposideros_galeritus.HipGal_scaffold_790761          I 8 N 0
s Hoolock_leuconedys.ctg274                                    145108 32 -    630532 gatgaaa-caaatacaagtttcaagc---tttaaca
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  71811 13 +     83186 G-TG----------------TCAAAG---GCTA---
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 1203
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            73755 13 +    143317 A-TG----------------TCAAAG---TCTA---
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 4 I 792
s Hylobates_agilis.k141_1155965                               8154 32 +     12352 gatgaaa-caaatacaagtttcaagc---tttaaca
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15341 32 +     55766 aatgaaa-caaatacaagtttcaagc---tttaaca
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054869 32 + 191637585 gatgaaa-caaatacaagtttcaagc---tttaaca
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803747 32 +  11177569 gatgaaa-caaatacaagtttcaagc---tttaaca
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                       9673 13 -    135385 A-TG----------------TCAAAG---TCTA---
i Hystrix_cristata.HysCri_scaffold_5660                  I 4 I 673
s Ictidomys_tridecemlineatus.JH393364.1                     388856 13 +   7955117 A-TG----------------TCAAAG---TCTA---
i Ictidomys_tridecemlineatus.JH393364.1                  I 4 I 812
s Inia_geoffrensis.IniGeo_flattened_line_69447               11698 13 -     16823 G-TG----------------TAAAAG---TCCA---
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 4 I 731
s Jaculus_jaculus.JH725527.1                               1241681 13 +   9596543 A-TA----------------TCAAAG---TATA---
i Jaculus_jaculus.JH725527.1                             I 4 I 639
s Kogia_breviceps.KogBre_flattened_line_3970                 73539 13 -     97402 G-TG----------------TAAAAG---TCCA---
i Kogia_breviceps.KogBre_flattened_line_3970             I 4 I 730
s Lagothrix_lagothricha.k141_246028                          44960 32 +    110728 aataaaa-caaatacaagtttcaagc---cttaaca
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    64807 13 -     65777 G-GG----------------TCAAAG---TATA---
i Lasiurus_borealis.LasBor_scaffold_16567                I 1 I 922
s Leontocebus_fuscicollis.k141_3470480                         441 32 -     23187 gataaaa-caaatacaagtttcaagc---cttaaga
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            754 32 -     14280 gataaaa-caaatacaagtttcaagc---cttaaga
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         397 32 +      3713 gataaaa-caaatacaagtttcaagc---cttaaga
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      587 32 +      8855 gataaaa-caaataaaagcttcaagc---cttaaca
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5389 32 -     13645 gataaaa-caaataaaagcttcaagc---cttaaca
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        815156 13 -   3914936 G-TG----------------TCAAAC---TCTA---
i Leptonychotes_weddellii.KB714746.1                     C 0 I 707
s Lepus_americanus.LepAme_scaffold_56121                     19922 16 +     24238 G-CA----------------TCAGAGAATTTTA---
i Lepus_americanus.LepAme_scaffold_56121                 I 4 I 1020
s Lipotes_vexillifer.KE559953.1                             342883 13 +    662738 G-TG----------------TAAAAG---TCCA---
i Lipotes_vexillifer.KE559953.1                          I 4 I 731
s Lophocebus_aterrimus.ctg367                               336385 32 -   1826925 gataaaa-caaacacaagtttcaagc---tttaaca
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39086686 13 +  43346337 A-AG----------------ACAAAG---TCTA---
i Loxodonta_africana.GL010049.1                          I 4 I 916
s Lycaon_pictus.CM007581.1                                41616190 11 +  59628241 G-TG----------------TC--AG---TCTA---
i Lycaon_pictus.CM007581.1                               C 0 I 1113
s Macaca_arctoides.k141_1757516                              47777 32 -     61512 gataaaa-caaacacaagtttcaagc---tttaaca
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375439 32 -  60120075 gataaaa-caaacacaagtttcaagc---tttaaca
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27707 32 +     30207 gataaaa-caaacacaagtttcaagc---tttaaca
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2545 32 -      5035 gataaaa-caaacacaagtttcaagc---tttaaca
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27660 32 +     30527 gataaaa-caaacacaagtttcaagc---tttaaca
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38836 32 -     50087 gataaaa-caaacacaagtttcaagc---tttaaca
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48581 32 +     51645 gataaaa-caaacacaagtttcaagc---tttaaca
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417783 32 - 187317192 gataaaa-caaacacaagtttcaagc---tttaaca
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402014 32 +  25927173 gataaaa-caaacacaagtttcaagc---tttaaca
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51185 32 -     62418 gataaaa-caaacacaagtttcaagc---tttaaca
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3716 32 +     14901 gataaaa-caaacacaagtttcaagc---tttaaca
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47658 32 +     59329 gataaaa-caaacacaagtttcaagc---tttaaca
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273565 32 +    668171 gataaaa-caaacacaagtttcaagc---tttaaca
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2197 32 -      5049 gataaaa-caaacacaagtttcaagc---tttaaca
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5363 32 +     17132 gataaaa-caaacacaagtttcaagc---tttaaca
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                224884 13 -    270270 G-TG----------------TCAAAG---TCTA---
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 3 I 720
s Mandrillus_leucophaeus.scaffold280                        324853 32 +  24302211 gataaaa-caaacacaagtttcaagc---tttaaca
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359684 32 -    752769 gataaaa-caaacacaagtttcaagc---tttaaca
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675208 13 -    737560 A-TA----------------TCAAAG---TCTA---
i Manis_javanica.JSZB01003497.1                          I 4 I 703
s Manis_pentadactyla.KN006162.1                             222508 13 +    317179 A-TA----------------TCAAAG---TCTA---
i Manis_pentadactyla.KN006162.1                          I 4 I 703
s Marmota_marmota.CZRN01000018.1                           7503069 13 +  40650429 a-ta----------------tcaaAG---TCTA---
i Marmota_marmota.CZRN01000018.1                         I 4 I 844
s Megaderma_lyra.MegLyr_scaffold_4542                       152231 13 +    207569 G-TG----------------TCAAAG---CCTC---
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 I 720
s Mellivora_capensis.MelCap_flattened_line_19308             27919 13 -     74585 G-TG----------------TCAAAG---TCTA---
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 704
s Meriones_unguiculatus.MerUng_scaffold_7390                 52392 13 -    140813 A-TG----------------TCAAAC---TCTA---
i Meriones_unguiculatus.MerUng_scaffold_7390             I 4 I 659
s Mesocricetus_auratus.KB708134.1                         17431726 13 +  29670104 A-TG----------------TCAAAC---tcta---
i Mesocricetus_auratus.KB708134.1                        I 4 I 666
s Mesoplodon_bidens.MesBid_scaffold_6114                     89167 13 +     93471 G-TG----------------TAAAAG---TCCA---
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 4 I 731
s Mico_argentatus.k141_582562                                11983 32 +     17804 gataaaa-caaataaaagtttcaagc---cttacca
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12483 32 -     12984 gataaaa-caaataaaagtttcaagc---cttacca
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20802 32 -     26561 gataaaa-caaataaaagtttcaagc---cttacca
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    48307 13 +    145209 G-GG----------------CCTAAG---TCTG---
i Microgale_talazaci.MicTal_scaffold_6613                I 4 I 986
s Micronycteris_hirsuta.MicHir_scaffold_2233                186719 13 +    200668 A-CA----------------TCCAAG---TCCA---
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 4 I 638
s Microtus_ochrogaster.CM001695.1                         15965466  8 +  27267610 ----------------------AAAC---TGta---
i Microtus_ochrogaster.CM001695.1                        I 2 I 675
s Miniopterus_natalensis.LDJU01000034.1                    6364861 13 -   8254450 A-TG----------------TCAAAG---CCTA---
i Miniopterus_natalensis.LDJU01000034.1                  I 4 I 1924
s Miniopterus_schreibersii.MinSch_scaffold_23309             43785 13 -     48117 A-TG----------------TCAAAG---TCTA---
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 4 I 722
s Miopithecus_ogouensis.k141_1534655                         24951 32 -     27822 gataaaa-caaacacaagtttcaagc---tttagca
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        10167 13 +     27589 G-TG----------------TCAAAC---TCTA---
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 927
s Monodon_monoceros.MonMon_M_scaffold_103                   361272 13 +    437263 G-TG----------------TAAAAG---TCCA---
i Monodon_monoceros.MonMon_M_scaffold_103                I 4 I 730
s Mormoops_blainvillei.MorMeg_scaffold_1417                 180948 13 +    366855 A-TG----------------TCAAAG---TCTA---
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 I 627
s Moschus_moschiferus.MosMos_scaffold_13123                  28118 13 -     82753 G-TG----------------TAAAAG---TCTA---
i Moschus_moschiferus.MosMos_scaffold_13123              I 4 I 2769
s Mungos_mungo.MunMun_flattened_line_18455                   20184 13 -     63510 G-TG----------------TCAAAG---ACTA---
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 928
s Murina_feae.MurFea_scaffold_17764                          42818 13 +     47283 G-TG----------------TCAAAG---TCTA---
i Murina_feae.MurFea_scaffold_17764                      I 4 I 708
s Mus_caroli.LT608237.1                                   35596646 13 + 120012414 A-TG----------------CCAAAC---Tgta---
i Mus_caroli.LT608237.1                                  I 4 I 670
s Mus_musculus.chr8                                       41690185 13 + 129401213 A-TG----------------CCAAAC---TGta---
i Mus_musculus.chr8                                      I 4 I 673
s Mus_pahari.LT608297.1                                   58218131 13 +  89631738 A-TG----------------TCAAAT---TGTA---
i Mus_pahari.LT608297.1                                  I 4 I 671
s Mus_spretus.CM004101.1                                  39499104 13 + 130317789 A-TG----------------CCAAAC---TGta---
i Mus_spretus.CM004101.1                                 I 4 I 672
s Muscardinus_avellanarius.MusAve_scaffold_5560               1381 13 -    124358 A-TG----------------TTGAAG---TCTA---
i Muscardinus_avellanarius.MusAve_scaffold_5560          I 4 I 663
s Mustela_putorius.JH418006.1                             14356783 13 +  14710649 G-TG----------------TCAAAG---TGTA---
i Mustela_putorius.JH418006.1                            C 0 I 700
s Myocastor_coypus.MyoCoy_scaffold_93829                      4593 13 +     14880 A-TG----------------TCAAAT---TCTA---
i Myocastor_coypus.MyoCoy_scaffold_93829                 I 4 n 4
s Myotis_brandtii.KE162005.1                               9795085 13 +  10118263 G-TG----------------TCAAAG---TCTA---
i Myotis_brandtii.KE162005.1                             I 4 I 699
s Myotis_davidii.KB100139.1                                4389259 13 +   6019432 G-TG----------------TCAAAG---TCTA---
i Myotis_davidii.KB100139.1                              I 4 I 696
s Myotis_lucifugus.GL429869.1                               385287 13 +   4330536 G-TG----------------TCAAAG---TCTA---
i Myotis_lucifugus.GL429869.1                            I 4 I 699
s Myotis_myotis.MyoMyo_scaffold_66571                         4072 13 +     18357 G-TG----------------TCAAAG---TCTA---
i Myotis_myotis.MyoMyo_scaffold_66571                    I 4 I 700
s Myrmecophaga_tridactyla.MyrTri_scaffold_4510              121793 13 +    130748 A-CC----------------TCAAAG---TCTA---
i Myrmecophaga_tridactyla.MyrTri_scaffold_4510           I 4 N 0
s Nannospalax_galili.KL204047.1                             948289  4 +   3037898 A-TG----------------T---------------
i Nannospalax_galili.KL204047.1                          I 4 I 665
s Nasalis_larvatus.k141_1350636                              31730 32 +     34575 gataaaa-caaacacaagtttcaagc---tttaaca
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1233938 13 -   7148211 G-TG----------------TAAAAG---TCCA---
i Neophocaena_asiaeorientalis.KZ687982.1                 I 4 I 730
s Noctilio_leporinus.NocLep_scaffold_7894                   129556 13 -    149072 A-TG----------------CCAAAG---TCTA---
i Noctilio_leporinus.NocLep_scaffold_7894                I 4 I 627
s Nomascus_annamensis.k141_1771965                           56042 32 -    132029 gatgaaa-caaatacaagtttcaagc---tttaaca
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12137 32 -     16345 gatgaaa-caaatacaagtttcaagc---tttaaca
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18026 32 +     22201 gatgaaa-caaatacaagtttcaagc---tttaaca
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416256 32 -  22158432 gatgaaa-caaatacaagtttcaagc---tttaaca
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28431 32 -     54323 gatgaaa-caaatacaagtttcaagc---tttaaca
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                199786 11 +   9404916 G-TG----------------TC--AG---TCTA---
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1215
s Octodon_degus.JH651603.1                                11057148 13 -  11899542 A-TG----------------TCAAAG---TCTA---
i Octodon_degus.JH651603.1                               I 4 I 1420
s Odobenus_rosmarus.KB229312.1                             1453584 13 +   2017862 G-TG----------------TCAAAC---CCTA---
i Odobenus_rosmarus.KB229312.1                           C 0 I 726
s Odocoileus_virginianus.KZ100018.1                         439218 11 -    630418 g-ac----------------tggaag---tc-----
i Odocoileus_virginianus.KZ100018.1                      I 5 I 2284
s Okapia_johnstoni.LVCL01S0005463.1                          17097 13 +    150152 T-TG----------------TGAAAG---TCTA---
i Okapia_johnstoni.LVCL01S0005463.1                      I 4 I 3959
s Ondatra_zibethicus.OndZib_scaffold_7387                    96084  8 -    140218 ----------------------AAAT---TGTA---
i Ondatra_zibethicus.OndZib_scaffold_7387                I 2 I 676
s Onychomys_torridus.OnyTor_scaffold_28377                    6665 13 -     41509 A-TG----------------TCAAAC---TCTA---
i Onychomys_torridus.OnyTor_scaffold_28377               I 4 I 663
s Orcinus_orca.KB316932.1                                  8104341 13 +  10937097 G-TG----------------TAAAAG---TCCA---
i Orcinus_orca.KB316932.1                                I 4 I 731
s Orycteropus_afer.OryAfe_flattened_line_201229               1572 13 +     11607 A-CG----------------TCAGTG---TGTA---
i Orycteropus_afer.OryAfe_flattened_line_201229          I 4 I 913
s Oryctolagus_cuniculus.CM000791.1                       107106581 16 - 174332312 g-CA----------------TCAGATAATTTTA---
i Oryctolagus_cuniculus.CM000791.1                       I 4 I 1020
s Otocyon_megalotis.JAEUCK010005147.1                        40832 11 +    559221 G-TG----------------TC--CA---TCTA---
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1127
s Ovis_aries.CM001607.2                                   26406800 13 -  44047080 G-TA----------------TAAAAG---TCTA---
i Ovis_aries.CM001607.2                                  I 4 I 3109
s Ovis_canadensis.OviCan_scaffold_67953                       7317 13 +     17875 G-TA----------------TAAAAG---TCTA---
i Ovis_canadensis.OviCan_scaffold_67953                  I 4 I 3215
s Pan_paniscus.AJFE02004363.1                                   36 33 +      1263 gatgaaaacaaatacaagtttcaagc---tttaaga
i Pan_paniscus.AJFE02004363.1                            C 0 I 65
s Pan_troglodytes.CM009242.2                               1476623 32 - 189151597 GATGAAA-CAAAtacaagtttcaagc---tttaaga
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   26183 13 -    230217 G-TG----------------TCTAAG---ACTA---
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 1570
s Panthera_pardus.KV860321.1                              18463509 13 -  18783137 G-TG----------------TCAAAG---ACTA---
i Panthera_pardus.KV860321.1                             C 0 I 1476
s Panthera_tigris.KE722367.1                               3974168 13 +   8748460 G-TG----------------TCAAAG---ACTA---
i Panthera_tigris.KE722367.1                             C 0 I 1418
s Pantholops_hodgsonii.KE114653.1                          1618326 11 +   2937107 G-TG----------------TA--AG---TCTA---
i Pantholops_hodgsonii.KE114653.1                        I 4 I 3103
s Papio_anubis.CM001495.2                                   245862 32 - 183742232 gataaaa-caaacacaagtttcaagc---tttaaca
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12147 32 +     21308 gataaaa-caaacacaagtttcaagc---tttaaca
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294890 32 -  20919399 gataaaa-caaacacaagtttcaagc---tttaaca
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24787 32 -     27687 gataaaa-caaacacaagtttcaagc---tttaaca
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1466 32 +     10553 gataaaa-caaacacaagtttcaagc---tttaaca
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1426 32 -     10386 gataaaa-caaacacaagtttcaagc---tttaaca
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     16763 13 +     78924 G-TG----------------TCAAAG---ACTA---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 1000
s Perognathus_longimembris.PerPac_flattened_line_89005        3890 13 +      9367 A-TG----------------TCAAAG---TGTA---
i Perognathus_longimembris.PerPac_flattened_line_89005   I 4 I 2026
s Peromyscus_maniculatus.KI615324.1                         249871 13 +  18517816 A-TG----------------TCAAAC---TCTA---
i Peromyscus_maniculatus.KI615324.1                      I 4 I 671
s Petromus_typicus.PetTyp_scaffold_17301                     34044 13 -     56120 A-TA----------------TCAAAG---TCTG---
i Petromus_typicus.PetTyp_scaffold_17301                 I 4 I 675
s Phocoena_phocoena.PhoPho_flattened_line_24159               5866 13 -     63832 G-TG----------------TAAAAG---TCCA---
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 4 I 730
s Piliocolobus_badius.k141_2704958                            5108 32 +     55023 gataaaa-caaacacaagtttcaagc---tttaaca
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4630 32 -     89929 gataaaa-caaacacaagtttcaagc---tttaaca
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5220 32 +     40849 gataaaa-caaacacaagtttcaagc---tttaaca
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256950 32 +  14605196 gataaaa-caaacacaagtttcaagc---tttaaca
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             5645 13 +     22231 G-TG----------------TCAAAG---TATA---
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 4 I 695
s Pithecia_albicans.k141_1239476                             66501 32 +    207309 gataaaa-caaatacaagtttccagc---cttaata
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7589 32 -     25401 gataaaa-caaatacaagtttccagc---cttaata
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33337 32 +     58159 gataaaa-caaatacaagtttccagc---cttaata
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33613 32 +     63561 gataaaa-caaatacaagtttccagc---cttaata
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33373 32 +     51148 gataaaa-caaatacaagtttccagc---cttaata
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558343 32 -   4542175 gataaaa-caaatacaagtttccagc---cttaata
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33357 32 +     51125 gataaaa-caaatacaagtttccagc---cttaata
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            2885 13 +     19503 G-TG----------------TAAAAG---TCCA---
i Platanista_gangetica.PlaMin_flattened_line_83166       I 4 I 731
s Plecturocebus_bernhardi.k141_2549090                        9774 32 +     39866 gataaaa-caaatacaagtttctagc---cttaaca
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4856 32 -      9282 gataaaa-caaatacaagttgctagc---cgtaaca
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44260 32 -     87950 gataaaa-caaatacaagtttctagc---cgtaaca
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44654 32 -     88961 gataaaa-caaatacaagtttctagc---cttaaca
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9352 32 -     39403 gataaaa-caaatacaagtttctagc---cttaaca
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44303 32 +     87928 gataaaa-caaatacaagtttctagc---cttaaca
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9351 32 -     60166 gataaaa-caaatacaagtttctagc---cttaaca
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16272 32 -     67232 gataaaa-caaatacaagtttctagc---cttaaca
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44204 32 -     90634 gataaaa-caaatacaagtttctagc---cttaaca
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45671 32 +     89403 gataaaa-caaatacaagtttctagc---cttaaca
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181802 32 - 189387572 GATGAAA-CAAAtacaagtttcaagc---tttaaga
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196545 32 -   9816681 gatgaaa-caaatacaagtctcaagc---tttaaga
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30310 32 +     69807 gataaaa-caaacacaagtttcaagc---tttaaca
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47491 32 -     80239 gataaaa-caaacacaagtttcaagc---tttaaca
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_165387                 6031 13 +      7663 C-TG----------------TCCGAG---TCCA---
i Procavia_capensis.ProCapCap_scaffold_165387            I 4 N 0
s Psammomys_obesus.NESX01036366.1                            39929 13 +     52041 A-TG----------------TCAAAC---Tcta---
i Psammomys_obesus.NESX01036366.1                        I 4 I 645
s Pteronotus_parnellii.KE847780.1                            53856 13 -     66298 A-TG----------------TCTAAG---TCTA---
i Pteronotus_parnellii.KE847780.1                        I 4 I 635
s Pteronura_brasiliensis.PteBra_flattened_line_48144          6367 13 -     18639 G-TG----------------TCAAAG---TGTA---
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 704
s Pteropus_alecto.KB030862.1                               5842494 13 -  28871421 G-TG----------------TCAAAG---TCTA---
i Pteropus_alecto.KB030862.1                             I 3 I 719
s Pteropus_vampyrus.KN525825.1                             3539009 13 -   4952924 G-TG----------------TCAAAG---TCTA---
i Pteropus_vampyrus.KN525825.1                           I 3 I 720
s Puma_concolor.QAVW01001104.1                            18100823 13 +  38429054 G-TG----------------TCAAAG---ACTA---
i Puma_concolor.QAVW01001104.1                           C 0 I 1151
s Pygathrix_cinerea.k141_1153803                             29677 32 +     91421 gataaaa-taaacacaagtttcaagc---tttaaca
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156229 32 -   7812017 gataaaa-caaacacaagtttcaagc---tttaaca
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10534 27 +     72585 gataaa------cacaagtttcaagc---tttaaca
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  1255 13 -     55207 G-TG----------------TAAAAG---TCTA---
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 4 I 2766
s Rattus_norvegicus.chr16                                 37024829 13 -  90668790 A-TG----------------TCAAAC---TGCT---
i Rattus_norvegicus.chr16                                I 4 I 621
s Rhinolophus_sinicus.LVEH01000134.1                       2916452 13 +   3329780 G-TG----------------TCAAAG---TCCA---
i Rhinolophus_sinicus.LVEH01000134.1                     I 5 I 721
s Rhinopithecus_bieti.k119_778604                             4139 32 +      7119 gataaaa-caaacatgagtttcaagc---tttaaca
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124809 32 + 195417433 gataaaa-caaacacGAGTTTCAAGC---TTTAACA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             238981 32 -   7961872 gataaaa-caaacatgagtttcaagc---tttaaca
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 76994 13 -    116970 G-TG----------------TCAAAG---TCTA---
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 3 I 722
s Saguinus_bicolor.k141_161125                                8932 32 +     12412 gataaaa-caaatacaagtttcaagc---cttaaca
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               393 32 +      9876 gataaaa-caaatacaagtttcaagc---cttaaca
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            15996 32 -     24931 gataaaa-caaatgcaagtttcaagc---cttaaca
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                                876 32 +      4564 gataaaa-caaatgcaagtttcaagc---cttaaca
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3681 32 -      7443 gataaaa-caaatacaagtttcaagc---cttaaca
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394587 31 - 209938924 gataaaa-caaataaaagtttcaagc---ct-aaca
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1296 32 +     10149 gataaaa-caaatacaagtttcaagc---cttaaca
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                636 32 +     10417 gataaaa-caaatacaagtttcaagc---cttaaca
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       10776 13 +     16473 G-TG----------------TAAAAG---TCTA---
i Saiga_tatarica.SaiTat_scaffold_39512                   I 4 I 2714
s Saimiri_boliviensis.NW_024100920.1                       1110759 32 + 121099817 gataaaa-caaatacaagtttCAAGC---CTTAATA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32326 32 -     47369 gataaaa-caaatacaagtttcaagc---cttaata
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32712 32 -     79414 gataaaa-caaatacaagtttcaagc---cttaata
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29403 32 -     34454 gataaaa-caaatacaagtttcaagc---cttaata
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16804 32 -     22428 gataaaa-caaatacaagtttcaagc---cttaata
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31958 32 -     47109 gataaaa-caaatacaagtttcaagc---cttaata
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     239988 32 +   5703754 gagaaaa-caaatacaagtttcaagc---cttaaca
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9578 32 +     21866 gagaaaa-caaatacaagtttcaaac---cttaaca
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    117293 12 +    313613 G-TG----------------TCAAAG---TCT----
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 5 I 1499
s Semnopithecus_entellus.k141_583282                          1116 32 +     11297 gataaaa-caaacacaagtttcaagc---tttaaca
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31509 32 +     58920 gataaaa-caaacacaagtttcaagc---tttaaca
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18007 32 -     45317 gataaaa-caaacacaagtttcaagc---tttaaca
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25665 32 -     42441 gataaaa-caaacacaagtttcaagc---tttaaca
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28341 32 -     29113 gataaaa-caaacacaagtttcaagc---tttaaca
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31418 32 -     48123 gataaaa-caaacacaagtttcaagc---tttaaca
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    51652 13 +     77746 A-TG----------------TTAAAC---TTTA---
i Sigmodon_hispidus.SigHis_scaffold_20193                I 4 I 666
s Solenodon_paradoxus.SolPar_flattened_line_126            1865802 13 -   1910179 A-TG----------------TCAAAG---TCTA---
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 I 608
s Sorex_araneus.JH798187.1                                 4672915 13 +  18376816 a-tg----------------tcaAAG---TTTG---
i Sorex_araneus.JH798187.1                               I 2 I 714
s Spermophilus_dauricus.KZ294078.1                         1870424 13 +   3870691 A-TG----------------TCAAAG---TCTa---
i Spermophilus_dauricus.KZ294078.1                       I 4 I 811
s Spilogale_gracilis.SpiGra_flattened_line_13525              8433 13 -     97271 G-TG----------------TCAAAG---TCTA---
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 6908
s Suricata_suricatta.SurSur_flattened_line_6629             126606 13 +    196729 G-TG----------------TCAAAG---ACTA---
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1358
s Sus_scrofa.CM000828.4                                    6645653 13 +  69701581 G-AG----------------TAAAGT---TCTT---
i Sus_scrofa.CM000828.4                                  I 4 I 1548
s Symphalangus_syndactylus.tarseq_199                       393513 32 +   1523678 gatgaaa-caaatacaagtttcaagc---tttaaca
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                15978 13 +     22964 A-TG----------------ACAAAT---TCTA---
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 4 I 699
s Tamandua_tetradactyla.TamTet_scaffold_667533                 312 13 +      1238 A-TA----------------TCAAAG---TCTA---
i Tamandua_tetradactyla.TamTet_scaffold_667533           I 4 N 0
s Tapirus_indicus.TapInd_scaffold_7432                      193339 13 +    199430 G-TG----------------TCAAAG---TCTA---
i Tapirus_indicus.TapInd_scaffold_7432                   I 4 I 715
s Tapirus_terrestris.TapTer_scaffold_755                    107307 13 -    539355 G-TG----------------TCAAAG---TCTA---
i Tapirus_terrestris.TapTer_scaffold_755                 I 4 I 715
s Tarsius_lariang.k141_1733899                                2660 31 +      9917 G-TAAAT-TATTTATAAGTGTCAAAG---TCTAATT
i Tarsius_lariang.k141_1733899                           C 0 I 988
s Tarsius_wallacei.k141_226975                                9459 31 +     20590 G-TAAAT-TATTTATAAGTGTCAAAG---TCTAATT
i Tarsius_wallacei.k141_226975                           C 0 I 985
s Theropithecus_gelada.CM009954.1                           355671 32 - 186847797 GATAAAA-CAAGCAcaagtttcaagc---tttaaca
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26259 13 -     33621 A-TG----------------TCAAAG---TCTG---
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 4 I 670
s Tolypeutes_matacus.TolMat_scaffold_31955                   21337 13 -     31044 A-TT----------------CCAAAG---TCCA---
i Tolypeutes_matacus.TolMat_scaffold_31955               I 4 I 855
s Tonatia_saurophila.TonSau_scaffold_294                    481848 13 -    610378 G-TG----------------TCCAAG---TCCA---
i Tonatia_saurophila.TonSau_scaffold_294                 I 4 I 643
s Trachypithecus_auratus.k141_1189070                        23417 32 +     26378 gataaaa-caaacacaagtttcaagc---tttaaca
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36216 32 -     78344 gataaaa-caaacacaagtttcaagc---tttaaca
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22742 32 +     25722 gataaaa-caaacacaagtttcaagc---tttaaca
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31172 32 -     62838 gataaaa-caaacacaagtttcaagc---tttaaca
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31163 32 +     46913 gataaaa-caaacacaagtttcaagc---tttaaca
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11900 32 -     28527 gataaaa-caaacacaagtttcaagc---tttaaca
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33107 32 -     64340 gataaaa-caaacacaagtttcaagc---tttaaca
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31145 32 -     63452 gataaaa-caaacacaagtttcaagc---tttaaca
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12592 32 +     22490 gataaaa-caaacacaagtttcaagc---tttaaca
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          558 32 +      9911 gataaaa-caaacacaagtttcaagc---tttaaca
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          353 32 -     33539 gataaaa-caaacacaagtttcaagc---tttaaca
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258112 32 -   6242583 gataaaa-caaacacaagtttcaagc---tttaaca
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4131 32 +     19340 gataaaa-caaacacaagtttcaagc---tttaaca
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   175587 13 -    200418 A-TA----------------TAAAAG---TCTA---
i Tragulus_javanicus.TraJav_scaffold_3462                I 4 I 865
s Trichechus_manatus.JH594705.1                            6483368 13 -  10818551 A-TG----------------TCAAGG---TCTA---
i Trichechus_manatus.JH594705.1                          I 4 I 1843
s Tupaia_chinensis.KB320699.1                              1837639 13 -   4065304 a-ta----------------tgaaAG---TTCA---
i Tupaia_chinensis.KB320699.1                            I 263 I 953
s Tupaia_tana.TupTan_flattened_line_394                      11701 13 -     70247 G-TA----------------TGAAAG---TTCA---
i Tupaia_tana.TupTan_flattened_line_394                  I 274 I 984
s Tursiops_truncatus.MRVK01000835.1                       17367466 13 -  33153633 G-TG----------------TAAAAG---TCCA---
i Tursiops_truncatus.MRVK01000835.1                      I 4 I 731
s Uropsilus_gracilis.UroGra_scaffold_46687                    5266 11 -     21056 G-TG----------------TCAATG---TC-----
i Uropsilus_gracilis.UroGra_scaffold_46687               I 5 I 1159
s Ursus_maritimus.KK499267.1                                183797 13 +   5085361 A-TG----------------TTAAAG---TCTA---
i Ursus_maritimus.KK499267.1                             C 0 I 725
s Vicugna_pacos.KN270157.1                                   77992 13 +   5488506 G-CG----------------TGAAAG---TCTG---
i Vicugna_pacos.KN270157.1                               I 1 I 731
s Vulpes_lagopus.VulLag_flattened_line_12041                106720 11 -    112863 G-TG----------------TC--AG---TCTA---
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 1174
s Xerus_inauris.XerIna_scaffold_2302                        176155 13 -    224448 A-TG----------------TCAAAG---TCTA---
i Xerus_inauris.XerIna_scaffold_2302                     I 4 I 978
s Zalophus_californianus.ZalCal_flattened_line_17732         30796 13 -     86975 G-TG----------------TCAAAC---CCTA---
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 725
s Zapus_hudsonius.ZapHud_scaffold_286923                      1567 13 -      1899 A-TA----------------GCAAAG---TCTA---
i Zapus_hudsonius.ZapHud_scaffold_286923                 I 4 N 0
e Crocidura_indochinensis.CroInd_scaffold_77846              11078 589 +     12657 I
e Elephantulus_edwardii.JH947257.1                         1227257 63261 +  10337057 T
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Antilocapra_americana.AntAmePen_scaffold_21030             52491 474 -     68529 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9500  9 +     36723 gc-g-g----aagag
s Acinonyx_jubatus.LLWD01001279.1                           815761  9 +   1699592 at-a-a----cagcc
i Acinonyx_jubatus.LLWD01001279.1                        I 1184 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418079  8 +  29979442 at-a-g----cagc-
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 833 C 0
s Ailurus_fulgens.LNAC01001112.1                            218073  9 +    347723 at-a-g----cagcc
i Ailurus_fulgens.LNAC01001112.1                         I 709 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    20784  9 -     61208 AA-A-A----TAGTG
i Allactaga_bullata.AllBul_scaffold_20030                I 639 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50452  9 +     53615 gc-a-g----aagag
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2479  9 +     13857 gc-a-g----aagag
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19034  9 -     21945 gc-a-g----aagag
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20719  9 +     32033 gc-a-g----aagag
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73976  9 -     84148 gc-a-g----aagag
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46214  9 -     78289 gc-a-g----aagag
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45641  9 +     55831 gc-a-g----aagag
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44104  9 -     64179 gc-a-g----aagag
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1212  9 -      3959 gc-a-g----aagag
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42729  9 +     45454 gc-a-g----aagag
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48378  9 +     70886 gc-a-g----aagag
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10551  9 +     30854 gc-a-g----aagag
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34685  9 +     42133 gc-a-g----aagag
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1591170  9 +   2318259 ac-a-g----cagcc
i Ammotragus_lervia.NIVO01071767.1                       I 3222 I 5
s Anoura_caudifer.AnoCau_scaffold_1412                      179200  9 -    412891 gt-a-g----ccacc
i Anoura_caudifer.AnoCau_scaffold_1412                   I 641 C 0
s Aotus_azarae.k141_887050                                    2918  9 +     17741 gc-a-g----aagag
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3543  9 -     15923 gc-a-g----aagag
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673825  9 +   5030052 GC-A-G----AAGAG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3819  9 -     16391 gc-a-g----aagag
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3378  9 -     17186 gc-a-g----aagag
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      26579  9 -     32367 AC-A-A----CAGTC
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 609 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  7716  9 -     15198 GT-A-G----CCAcc
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 634 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276441  9 +  21539123 gc-a-g----aagag
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12607  9 +     48076 gc-a-g----aagag
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7742  9 -     28759 gc-a-g----aagag
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35298  9 +     44353 gc-a-g----aagag
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50667  9 -     71267 gc-a-g----aagag
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24725  9 -     33135 gc-a-g----aagag
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7965932  9 -  23207421 ac-a-g----cagac
i Balaenoptera_acutorostrata.KI537508.1                  I 730 C 0
s Balaenoptera_bonaerensis.DF411050.1                         2432  9 -     25979 ac-a-g----cagac
i Balaenoptera_bonaerensis.DF411050.1                    I 730 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     92168  9 +    124022 ac-a-g----cagtc
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 3220 I 5
s Bos_indicus.CM003047.1                                  20361649  9 +  48749331 ac-a-g----cagcc
i Bos_indicus.CM003047.1                                 I 2769 I 5
s Bos_mutus.JH880303.1                                      760251  9 +   1948126 ac-a-g----cagcc
i Bos_mutus.JH880303.1                                   I 2807 I 5
s Bos_taurus.CM000203.6                                   27550355  9 -  45695690 ac-a-g----cagcc
i Bos_taurus.CM000203.6                                  I 2769 I 5
s Bubalus_bubalis.KI419123.1                               1535364  9 -   4408762 ac-a-g----cagcc
i Bubalus_bubalis.KI419123.1                             I 2770 I 5
s Cacajao_ayresi.k141_96119                                   9531  9 +     28062 gc-a-g----aagag
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44825  9 -     91139 gc-a-g----aagag
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22351  9 +     95584 gc-a-g----aagag
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22264  9 +    119600 gc-a-g----aagag
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11916  9 +     18648 gc-a-g----aagag
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11424  9 -     13885 gc-a-g----aagag
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3518  9 -      8861 gc-a-g----aagag
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455911  9 + 189096842 gc-a-g----aagag
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3432  9 +      8664 gc-a-g----aagag
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7633355  9 +  17673402 ac-a-g----tagcc
i Camelus_bactrianus.KN276810.1                          I 686 C 0
s Camelus_dromedarius.KN272107.1                           4667656  9 +   7040546 ac-a-g----tagcc
i Camelus_dromedarius.KN272107.1                         I 700 C 0
s Camelus_ferus.KB017975.1                                 1211344  9 +   1652518 ac-a-g----tagcc
i Camelus_ferus.KB017975.1                               I 730 C 0
s CanFam4.chr16                                           42508045  9 +  60362399 AT-A-G----CAGCC
i CanFam4.chr16                                          I 1113 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    11681  9 -     23171 AT-A-G----CAGCC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 1113 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225022  9 +   9314153 AT-A-G----CAGCC
i Canis_lupus_dingo.QKWQ01000480.1                       I 1111 C 0
s Canis_lupus_familiaris.chr16                            41618159  9 +  59632846 AT-A-G----CAGCC
i Canis_lupus_familiaris.chr16                           I 1113 C 0
s Canis_lupus_orion.HG994398.1                            45109740  9 -  63665305 AT-A-G----CAGCC
i Canis_lupus_orion.HG994398.1                           I 1113 C 0
s Capra_aegagrus.CM003241.1                               27415172  9 -  46296322 ac-a-g----cagcc
i Capra_aegagrus.CM003241.1                              I 3295 I 5
s Capra_hircus.CM004588.1                                 26597169  9 +  44709034 ac-a-g----cagcc
i Capra_hircus.CM004588.1                                I 3218 I 5
s Capromys_pilorides.CapPil_scaffold_26391                    1131  9 -     20114 AA-A-A----CATCT
i Capromys_pilorides.CapPil_scaffold_26391               N 0 C 0
s Carlito_syrichta.NW_007259797.1                           273491  1 +    496798 --------------C
i Carlito_syrichta.NW_007259797.1                        I 687 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               2592  9 +      9923 gt-a-g----ccacc
i Carollia_perspicillata.CarPer_scaffold_107871          I 640 C 0
s Castor_canadensis.CasCan_scaffold_39952                    30424  9 -     39886 TC-A-A----CAGTG
i Castor_canadensis.CasCan_scaffold_39952                I 744 I 3
s Catagonus_wagneri.CatWag_scaffold_2839                     82283  9 -    217609 ac-a-g----ctgcc
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1018 C 0
s Cavia_aperea.AVPZ01000300.1                              4999211  9 +  23392119 AA-A-A----CATCC
i Cavia_aperea.AVPZ01000300.1                            I 844 C 0
s Cavia_porcellus.DS562891.1                               5002652  9 +  23407841 AA-A-A----CATCC
i Cavia_porcellus.DS562891.1                             I 843 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       65729  9 -     66877 AA-A-A----CATCC
i Cavia_tschudii.CavTsc_scaffold_23560                   I 841 C 0
s Cebuella_niveiventris.k141_592277                           6832  9 -     12580 gc-a-g----aagag
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44890  9 +     53515 gc-a-g----aagag
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  375631  9 -  26074798 Gc-a-g----aagag
i Cebus_albifrons.Contig27                               I 992 C 0
s Cebus_olivaceus.k141_1404781                                9700  9 -     34880 gc-a-g----aagag
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68796  9 -     89041 gc-a-g----aagag
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         1137  1 -     76265 --------------T
i Cephalopachus_bancanus.k141_1140705                    N 0 C 0
s Ceratotherium_simum.JH767749.1                          15494599  9 -  27778364 at-a-g----cagct
i Ceratotherium_simum.JH767749.1                         I 714 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          21432  9 +     27315 at-a-g----cagct
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 714 C 0
s Cercocebus_atys.KQ010504.1                                143535  9 -   4669795 gC-A-G----AAGAG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47274  9 +     47900 gc-a-g----aagag
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2707  9 -     14410 gc-a-g----aagag
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47089  9 -    148725 gc-a-g----aagag
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29367  9 -     40656 gc-a-g----aagag
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9326  9 +     20796 gc-a-g----aagag
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14440  9 -     17524 gc-a-g----aagag
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30172  9 -     34525 gc-a-g----aagag
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13952  9 -     25376 gc-a-g----aagag
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366539  9 -  39242232 gc-a-g----aagag
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272266  9 +  21565898 gc-a-g----aagag
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34631  9 -     45857 gc-a-g----aagag
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29532  9 -     32606 gc-a-g----aagag
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5695  9 +      8499 gc-a-g----aagag
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28094  9 +     70610 gc-a-g----aagag
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25054  9 +     36323 gc-a-g----aagag
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15105  9 -     19938 at-g-g----cagcc
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 849 C 0
s Cheracebus_lucifer.k141_2312002                            10637  9 -     32913 gc-a-g----aacag
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21050  9 -     40346 gc-a-g----aacag
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21305  9 +    216457 gc-a-g----aacag
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21094  9 +     39636 gc-a-g----aacag
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1242110  9 -   2543920 AA-A-A----CAGCT
i Chinchilla_lanigera.JH722012.1                         I 1403 C 0
s Chiropotes_albinasus.k141_1091259                          33068  9 -     52013 gc-a-g----aagag
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44165  9 -    112038 gc-a-g----aagag
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9716  9 +     34062 gc-a-g----aagag
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345954  9 +  18827391 gc-a-g----aagag
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12493  9 -     44032 gc-a-g----aagag
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307340  9 - 135778131 gC-A-G----AAGAG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 1783  9 +     10270 ac-a-g----cagcc
i Choloepus_didactylus.ChoDid_scaffold_147047            I 879 C 0
s Choloepus_hoffmanni.KN194906.1                            609256  9 -    839153 ac-a-g----cagcc
i Choloepus_hoffmanni.KN194906.1                         I 876 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               1820  9 -      4087 TT-C-A----TAGCT
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          I 1490 C 0
s Colobus_angolensis.KN981557.1                             411753  9 -   2368649 gC-A-G----AAGAG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381635  9 - 200372422 gc-a-g----aagag
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5187  9 -     84244 gc-a-g----aagag
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35809795  9 +  53390261 GC-A-A----CATCT
i Condylura_cristata.JH655891.1                          I 1184 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          5358  9 -      8242 ac-a-a----taacc
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 710 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47020  6 -     83289 -----G----TAATC
i Cricetomys_gambianus.CriGam_scaffold_14425             I 616 C 0
s Cricetulus_griseus.LT883664.1                          213118555  6 - 224834208 -----A----TACTC
i Cricetulus_griseus.LT883664.1                          I 376 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              11667  9 +     12657 AC-A-G----CAGTC
i Crocidura_indochinensis.CroInd_scaffold_77846          I 589 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              6972  9 +     87169 ct-a-a----cagcc
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 940 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    649263  9 -   1526836 GC-A-A----TGGTC
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 1879 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22000  9 +     50838 AA-C-A----CAGAC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 1449 I 30
s Cuniculus_paca.CunPac_flattened_line_7025                  10406  9 +     36344 AA-A-A----CATCC
i Cuniculus_paca.CunPac_flattened_line_7025              I 1317 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            30829  9 +     75252 aa-a-a----catcc
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 730 C 0
s Dasypus_novemcinctus.JH564415.1                          2112463 10 -   2246927 AC-GGG----CAGCC
i Dasypus_novemcinctus.JH564415.1                        I 834 C 0
s Delphinapterus_leucas.KZ290073.1                        18634338  9 -  35494412 ac-a-g----cagac
i Delphinapterus_leucas.KZ290073.1                       I 730 C 0
s Desmodus_rotundus.KZ672289.1                            11867579  9 -  20541912 gt-a-c----ccacc
i Desmodus_rotundus.KZ672289.1                           I 640 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  666873  9 -   1390856 at-a-g----cagct
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 716 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  141671  9 -    198055 at-a-g----cagct
i Diceros_bicornis.DicBicMic_scaffold_5955               I 714 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   102190  9 -    115145 AA-A-A----CAGCC
i Dinomys_branickii.DinBra_scaffold_10381                I 1409 C 0
s Dipodomys_ordii.KN672350.1                              18953756  9 -  37912305 AT-A-A----AATCT
i Dipodomys_ordii.KN672350.1                             I 1243 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   8665  9 -     10735 AT-A-G----AAGCT
i Dipodomys_stephensi.DipSte_scaffold_89095              I 1240 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 11958  9 +     14636 AA-A-A----CATCC
i Dolichotis_patagonum.DolPat_scaffold_80628             I 773 C 0
s Echinops_telfairi.JH980293.1                            62858124  8 - 111700974 AC-A-G----TAGG-
i Echinops_telfairi.JH980293.1                           I 1006 C 0
s Eidolon_helvum.AWHC01266696.1                               8682  9 +     19438 AC-A-G----TAACC
i Eidolon_helvum.AWHC01266696.1                          I 727 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       244977  9 -    607251 ac-a-g----cagcc
i Elaphurus_davidianus.JRFZ01104969.1                    I 2660 I 5
s Elephantulus_edwardii.JH947257.1                         9113189  8 -  10337057 AC-C-A----CA-CC
i Elephantulus_edwardii.JH947257.1                       I 3728 C 0
s Ellobius_lutescens.LOEQ01008920.1                          34735  6 +    110024 -----A----TGCTC
i Ellobius_lutescens.LOEQ01008920.1                      I 687 C 0
s Ellobius_talpinus.LOJH01026522.1                           16663  6 +     18970 -----A----TGCTC
i Ellobius_talpinus.LOJH01026522.1                       I 679 C 0
s Enhydra_lutris.KZ291758.1                               24924571  9 +  41312741 at-a-g----cagcc
i Enhydra_lutris.KZ291758.1                              I 6789 C 0
s Eptesicus_fuscus.JH977646.1                             12581229  9 +  14770903 at-a-g----ccaca
i Eptesicus_fuscus.JH977646.1                            I 696 C 0
s Equus_asinus.JREZ01000139.1                              3043813  9 -   4378816 tc-g-g----cagcc
i Equus_asinus.JREZ01000139.1                            I 708 C 0
s Equus_caballus.CM000403.2                               21377747  9 +  39960074 cc-g-g----cagcc
i Equus_caballus.CM000403.2                              I 703 C 0
s Equus_przewalskii.KK951119.1                              413729  9 -    498745 cc-g-g----cagcc
i Equus_przewalskii.KK951119.1                           I 703 C 0
s Erinaceus_europaeus.JH835339.1                           3670182  9 +   7059049 ac-a-g----aagcc
i Erinaceus_europaeus.JH835339.1                         I 2092 I 242
s Erythrocebus_patas.Contig38                               265482  9 +  21539334 gc-a-g----aagag
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           73547  9 -    133382 ac-a-g----cagac
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 731 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              1260  9 +     25849 ac-a-g----cagac
i Eubalaena_japonica.EubJap_flattened_line_57114         I 731 C 0
s Felis_catus.CM001381.2                                 186249764  9 - 206538554 at-a-a----cagcc
i Felis_catus.CM001381.2                                 I 1277 C 0
s Felis_catus_fca126.CM031415.1                          185119720  9 - 205367284 at-a-a----cagcc
i Felis_catus_fca126.CM031415.1                          I 1447 C 0
s Felis_nigripes.FelNig_flattened_line_44075                   362  9 +     25330 at-a-a----cagcc
i Felis_nigripes.FelNig_flattened_line_44075             N 0 C 0
s Fukomys_damarensis.KN121974.1                            2925190  4 -   3816255 -----------AGCC
i Fukomys_damarensis.KN121974.1                          I 1059 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                4130  9 -     28519 ac-a-g----cagcc
i Galeopterus_variegatus.GalVar_scaffold_51812           I 712 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       1130  9 +    660261 ac-a-g----tagcc
i Giraffa_tippelskirchi.LVKQ01S007888.1                  N 0 I 5
s Glis_glis.GliGli_scaffold_163929                            3996  9 -      6791 GT-G-A----CAGCC
i Glis_glis.GliGli_scaffold_163929                       I 682 C 0
s Gorilla_beringei.k141_3218903                                251  9 -      2763 gc-g-g----aagag
i Gorilla_beringei.k141_3218903                          I 32 C 0
s Gorilla_gorilla.LT578341.1                                258672  9 - 186649187 gc-g-g----aagag
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    5829  9 -     78134 AG-A-A----gagcc
i Graphiurus_murinus.GraMur_scaffold_10447               I 1448 C 0
s Helogale_parvula.HelPar_flattened_line_2585                33376  9 -    327341 ct-g-a----cagcc
i Helogale_parvula.HelPar_flattened_line_2585            I 907 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14896  9 +     48891 ac-a-g----cagcc
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 3210 I 5
s Heterocephalus_glaber.JH602082.1                         1937642  3 -  22651954 AA-A-----------
i Heterocephalus_glaber.JH602082.1                       I 3122 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                5875  8 +      8654 ac-a-g-----agcc
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 3822 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               10375  9 -     36432 ac-a-g----cagcc
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 1075 C 0
s Hipposideros_armiger.JXIK01000431.1                      1555401  9 -   1711038 AG-A-A----TAgcc
i Hipposideros_armiger.JXIK01000431.1                    I 2088 C 0
s Hipposideros_galeritus.HipGal_scaffold_245053               1218  9 -      1435 ag-a-a----tagcc
i Hipposideros_galeritus.HipGal_scaffold_245053          N 0 I 29
s Hoolock_leuconedys.ctg274                                    145140  9 -    630532 gc-a-g----aagag
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73027  9 +     83186 ct-a-a----cagct
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1203 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            74560  9 +    143317 AA-A-A----TATCC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 792 C 0
s Hylobates_agilis.k141_1155965                               8186  9 +     12352 gc-a-g----aagag
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15373  9 +     55766 gc-a-g----aagag
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054901  9 + 191637585 gc-a-g----aagag
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803779  9 +  11177569 gc-a-g----aagag
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      10359  9 -    135385 ac-a-a----cagcc
i Hystrix_cristata.HysCri_scaffold_5660                  I 673 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     389681  9 +   7955117 AC-A-G----CAGCC
i Ictidomys_tridecemlineatus.JH393364.1                  I 812 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               12442  9 -     16823 ac-a-g----cagac
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 731 C 0
s Jaculus_jaculus.JH725527.1                               1242333  9 +   9596543 ta-a-g----tagtg
i Jaculus_jaculus.JH725527.1                             I 639 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 74282  9 -     97402 ac-a-g----cggac
i Kogia_breviceps.KogBre_flattened_line_3970             I 730 C 0
s Lagothrix_lagothricha.k141_246028                          44992  9 +    110728 gc-a-g----aagag
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_16567                    65742  9 -     65777 AT-A-G----CCGCA
i Lasiurus_borealis.LasBor_scaffold_16567                I 922 n 922
s Leontocebus_fuscicollis.k141_3470480                         473  9 -     23187 gc-a-g----aagag
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            786  9 -     14280 gc-a-g----aagag
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         429  9 +      3713 gc-a-g----aagag
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      619  9 +      8855 gc-a-g----aagag
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5421  9 -     13645 gc-a-g----aagag
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        815876  9 -   3914936 at-a-g----cagcc
i Leptonychotes_weddellii.KB714746.1                     I 707 C 0
s Lepus_americanus.LepAme_scaffold_56121                     20958  9 +     24238 AT-A-G----CAGCC
i Lepus_americanus.LepAme_scaffold_56121                 I 1020 C 0
s Lipotes_vexillifer.KE559953.1                             343627  9 +    662738 ac-a-g----cagac
i Lipotes_vexillifer.KE559953.1                          I 731 C 0
s Lophocebus_aterrimus.ctg367                               336417  9 -   1826925 gc-a-g----aagag
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39087615  9 +  43346337 ac-a-g----cagcc
i Loxodonta_africana.GL010049.1                          I 916 C 0
s Lycaon_pictus.CM007581.1                                41617314  9 +  59628241 AT-A-G----CAGCC
i Lycaon_pictus.CM007581.1                               I 1113 C 0
s Macaca_arctoides.k141_1757516                              47809  9 -     61512 gc-a-g----aagag
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375471  9 -  60120075 gc-a-g----aagag
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27739  9 +     30207 gc-a-g----aagag
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2577  9 -      5035 gc-a-g----aagag
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27692  9 +     30527 gc-a-g----aagag
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38868  9 -     50087 gc-a-g----aagag
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48613  9 +     51645 gc-a-g----aagag
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417815  9 - 187317192 gC-A-G----AAGAG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402046  9 +  25927173 gC-A-G----AAGAG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51217  9 -     62418 gc-a-g----aagag
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3748  9 +     14901 gc-a-g----aagag
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47690  9 +     59329 gc-a-g----aagag
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273597  9 +    668171 gc-a-g----aagag
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2229  9 -      5049 gc-a-g----aagag
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5395  9 +     17132 gc-a-g----aagag
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                225617  9 -    270270 AC-A-G----TAACC
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 720 C 0
s Mandrillus_leucophaeus.scaffold280                        324885  9 +  24302211 gc-a-g----aagag
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359716  9 -    752769 gc-a-g----aagag
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675924  9 -    737560 at-a-c----tagcc
i Manis_javanica.JSZB01003497.1                          I 703 C 0
s Manis_pentadactyla.KN006162.1                             223224  9 +    317179 at-a-c----tagcc
i Manis_pentadactyla.KN006162.1                          I 703 C 0
s Marmota_marmota.CZRN01000018.1                           7503926  9 +  40650429 AC-A-A----CAGCC
i Marmota_marmota.CZRN01000018.1                         I 844 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       152964  9 +    207569 ac-a-a----taacc
i Megaderma_lyra.MegLyr_scaffold_4542                    I 720 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             28636  9 -     74585 at-a-g----cgacc
i Mellivora_capensis.MelCap_flattened_line_19308         I 704 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53064  6 -    140813 -----A----TAGTC
i Meriones_unguiculatus.MerUng_scaffold_7390             I 659 C 0
s Mesocricetus_auratus.KB708134.1                         17432405  6 +  29670104 -----A----TACTC
i Mesocricetus_auratus.KB708134.1                        I 666 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     89911  9 +     93471 ac-a-g----cagac
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 731 C 0
s Mico_argentatus.k141_582562                                12015  9 +     17804 gc-a-g----aagag
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12515  9 -     12984 gc-a-g----aagag
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20834  9 -     26561 gc-a-g----aagag
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49306  8 +    145209 AA-A-G----TAGA-
i Microgale_talazaci.MicTal_scaffold_6613                I 986 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                187370  9 +    200668 gt-a-g----ccacc
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 638 C 0
s Microtus_ochrogaster.CM001695.1                         15966149  6 +  27267610 -----A----TGCTC
i Microtus_ochrogaster.CM001695.1                        I 675 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6366798  9 -   8254450 at-a-g----ccaca
i Miniopterus_natalensis.LDJU01000034.1                  I 1924 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             44520  9 -     48117 at-a-g----ccaca
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 722 C 0
s Miopithecus_ogouensis.k141_1534655                         24983  9 -     27822 gc-a-g----aagag
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11107  9 +     27589 at-a-g----cagcc
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 927 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362015  9 +    437263 ac-a-g----cagac
i Monodon_monoceros.MonMon_M_scaffold_103                I 730 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 181588  9 +    366855 gt-a-g----ccgcc
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 627 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  30900  9 -     82753 ac-a-g----cagcc
i Moschus_moschiferus.MosMos_scaffold_13123              I 2769 I 5
s Mungos_mungo.MunMun_flattened_line_18455                   21125  9 -     63510 ct-g-a----cagcc
i Mungos_mungo.MunMun_flattened_line_18455               I 928 C 0
s Murina_feae.MurFea_scaffold_17764                          43539  9 +     47283 at-a-g----ccaca
i Murina_feae.MurFea_scaffold_17764                      I 708 C 0
s Mus_caroli.LT608237.1                                   35597329  6 + 120012414 -----G----TAGCC
i Mus_caroli.LT608237.1                                  I 670 C 0
s Mus_musculus.chr8                                       41690871  6 + 129401213 -----G----TAGCC
i Mus_musculus.chr8                                      I 673 C 0
s Mus_pahari.LT608297.1                                   58218815  6 +  89631738 -----A----TAGCC
i Mus_pahari.LT608297.1                                  I 671 C 0
s Mus_spretus.CM004101.1                                  39499789  6 + 130317789 -----G----TAGCC
i Mus_spretus.CM004101.1                                 I 672 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               2057  9 -    124358 ag-g-a----tagcc
i Muscardinus_avellanarius.MusAve_scaffold_5560          I 663 C 0
s Mustela_putorius.JH418006.1                             14357496  9 +  14710649 at-g-g----tagcc
i Mustela_putorius.JH418006.1                            I 700 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     67094  9 +     67721 AA-A-A----CATCC
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 2086 C 0
s Myotis_brandtii.KE162005.1                               9795797  9 +  10118263 at-a-g----ccaca
i Myotis_brandtii.KE162005.1                             I 699 C 0
s Myotis_davidii.KB100139.1                                4389968  9 +   6019432 at-a-g----ccaca
i Myotis_davidii.KB100139.1                              I 696 C 0
s Myotis_lucifugus.GL429869.1                               385999  9 +   4330536 at-a-g----ccaca
i Myotis_lucifugus.GL429869.1                            I 699 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         4785  9 +     18357 AT-A-G----CCACA
i Myotis_myotis.MyoMyo_scaffold_66571                    I 700 C 0
s Nannospalax_galili.KL204047.1                             948958  6 +   3037898 -----A----CAgcc
i Nannospalax_galili.KL204047.1                          I 665 C 0
s Nasalis_larvatus.k141_1350636                              31762  9 +     34575 gc-a-g----aagag
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1234681  9 -   7148211 ac-a-g----cagac
i Neophocaena_asiaeorientalis.KZ687982.1                 I 730 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   130196  9 -    149072 at-g-g----ccacc
i Noctilio_leporinus.NocLep_scaffold_7894                I 627 C 0
s Nomascus_annamensis.k141_1771965                           56074  9 -    132029 gc-a-g----aagag
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12169  9 -     16345 gc-a-g----aagag
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18058  9 +     22201 gc-a-g----aagag
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416288  9 -  22158432 gc-a-g----aagag
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28463  9 -     54323 gc-a-g----aagag
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201012  9 +   9404916 AT-A-G----CAGCC
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1215 C 0
s Octodon_degus.JH651603.1                                11058581 10 -  11899542 AAAA-A----CAGCC
i Octodon_degus.JH651603.1                               I 1420 C 0
s Odobenus_rosmarus.KB229312.1                             1454323  9 +   2017862 at-a-g----cagcc
i Odobenus_rosmarus.KB229312.1                           I 726 C 0
s Odocoileus_virginianus.KZ100018.1                         441513  9 -    630418 ac-a-g----cagcc
i Odocoileus_virginianus.KZ100018.1                      I 2284 I 5
s Okapia_johnstoni.LVCL01S0005463.1                          21069  9 +    150152 ac-c-g----cagcc
i Okapia_johnstoni.LVCL01S0005463.1                      I 3959 I 5
s Ondatra_zibethicus.OndZib_scaffold_7387                    96768  6 -    140218 -----A----TGGTC
i Ondatra_zibethicus.OndZib_scaffold_7387                I 676 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7341  6 -     41509 -----A----TAGTC
i Onychomys_torridus.OnyTor_scaffold_28377               I 663 C 0
s Orcinus_orca.KB316932.1                                  8105085  9 +  10937097 ac-a-g----cagac
i Orcinus_orca.KB316932.1                                I 731 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               2498  9 +     11607 ac-a-g----cagcc
i Orycteropus_afer.OryAfe_flattened_line_201229          I 913 C 0
s Oryctolagus_cuniculus.CM000791.1                       107107617  9 - 174332312 AT-A-G----CAGCC
i Oryctolagus_cuniculus.CM000791.1                       I 1020 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        41970  9 +    559221 AT-A-G----CAGCT
i Otocyon_megalotis.JAEUCK010005147.1                    I 1127 C 0
s Ovis_aries.CM001607.2                                   26409922  9 -  44047080 ac-a-g----cagcc
i Ovis_aries.CM001607.2                                  I 3109 I 5
s Ovis_canadensis.OviCan_scaffold_67953                      10545  9 +     17875 ac-a-g----cagcc
i Ovis_canadensis.OviCan_scaffold_67953                  I 3215 I 5
s Pan_paniscus.AJFE02001037.1                                   30  9 +      1186 gc-G-G----AAGAG
i Pan_paniscus.AJFE02001037.1                            n 65 C 0
s Pan_troglodytes.CM009242.2                               1476655  9 - 189151597 gc-G-G----AAGAG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   27766  9 -    230217 at-a-a----cagcc
i Panthera_onca.PanOnc_flattened_line_3271               I 1570 C 0
s Panthera_pardus.KV860321.1                              18464998  9 -  18783137 at-a-a----cagcc
i Panthera_pardus.KV860321.1                             I 1476 C 0
s Panthera_tigris.KE722367.1                               3975599  9 +   8748460 at-a-a----cagcc
i Panthera_tigris.KE722367.1                             I 1418 C 0
s Pantholops_hodgsonii.KE114653.1                          1621440  9 +   2937107 ac-a-g----cagcc
i Pantholops_hodgsonii.KE114653.1                        I 3103 I 5
s Papio_anubis.CM001495.2                                   245894  9 - 183742232 GC-A-G----AAGAG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12179  9 +     21308 gc-a-g----aagag
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294922  9 -  20919399 gc-a-g----aagag
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24819  9 -     27687 gc-a-g----aagag
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1498  9 +     10553 gc-a-g----aagag
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1458  9 -     10386 gc-a-g----aagag
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     17776  9 +     78924 ct-a-a----cagca
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1000 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        5929  9 +      9367 AT-A-A----AAGCT
i Perognathus_longimembris.PerPac_flattened_line_89005   I 2026 C 0
s Peromyscus_maniculatus.KI615324.1                         250555  6 +  18517816 -----A----TAGTC
i Peromyscus_maniculatus.KI615324.1                      I 671 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     34732  9 -     56120 AA-A-A----CAGCT
i Petromus_typicus.PetTyp_scaffold_17301                 I 675 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               6609  9 -     63832 ac-a-g----cagac
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 730 C 0
s Piliocolobus_badius.k141_2704958                            5140  9 +     55023 gc-g-g----aagag
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4662  9 -     89929 gc-g-g----aagag
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5252  9 +     40849 gc-g-g----aagag
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256982  9 +  14605196 GC-G-G----AAGAG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             6353  9 +     22231 AT-A-G----CCACG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 695 C 0
s Pithecia_albicans.k141_1239476                             66533  9 +    207309 gc-a-g----aagag
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7621  9 -     25401 gc-a-g----aagag
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33369  9 +     58159 gc-a-g----aagag
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33645  9 +     63561 gc-a-g----aagag
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33405  9 +     51148 gc-a-g----aagag
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558375  9 -   4542175 gc-a-g----aagag
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33389  9 +     51125 gc-a-g----aagag
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            3629  9 +     19503 ac-a-g----cagac
i Platanista_gangetica.PlaMin_flattened_line_83166       I 731 C 0
s Plecturocebus_bernhardi.k141_2549090                        9806  9 +     39866 gc-a-g----aacag
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4888  9 -      9282 gc-a-g----aacag
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44292  9 -     87950 gc-a-g----aacag
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44686  9 -     88961 gc-a-g----aacag
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9384  9 -     39403 gc-a-g----aacag
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44335  9 +     87928 gc-a-g----aacag
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9383  9 -     60166 gc-a-g----aacag
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16304  9 -     67232 gc-a-g----aacag
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44236  9 -     90634 gc-a-g----aacag
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45703  9 +     89403 gc-a-g----aacag
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181834  9 - 189387572 gc-G-G----AAGAG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196577  9 -   9816681 gc-g-g----aagag
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30342  9 +     69807 gc-a-g----aagag
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47523  9 -     80239 gc-a-g----aagag
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2407  8 -     12774 ac-a-g-----agcc
i Procavia_capensis.ProCapCap_scaffold_128773            N 0 C 0
s Psammomys_obesus.NESX01036366.1                            40587  6 +     52041 -----A----TAGTC
i Psammomys_obesus.NESX01036366.1                        I 645 C 0
s Pteronotus_parnellii.KE847780.1                            54504  9 -     66298 gc-a-g----ccacc
i Pteronotus_parnellii.KE847780.1                        I 635 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7084 13 -     18639 at-a-gcaagcagcc
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 704 C 0
s Pteropus_alecto.KB030862.1                               5843226  9 -  28871421 AC-A-G----TAACC
i Pteropus_alecto.KB030862.1                             I 719 C 0
s Pteropus_vampyrus.KN525825.1                             3539742  9 -   4952924 AC-A-G----TAACC
i Pteropus_vampyrus.KN525825.1                           I 720 C 0
s Puma_concolor.QAVW01001104.1                            18101987  9 +  38429054 at-a-a----cagcc
i Puma_concolor.QAVW01001104.1                           I 1151 C 0
s Pygathrix_cinerea.k141_1153803                             29709  9 +     91421 gc-a-g----aagag
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156261  9 -   7812017 gc-a-g----aagag
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10561  9 +     72585 gc-a-g----aagag
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4034  9 -     55207 ac-a-g----cagcc
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 2766 I 5
s Rattus_norvegicus.chr16                                 37025463  6 -  90668790 -----A----CAGTC
i Rattus_norvegicus.chr16                                I 621 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2917186  9 +   3329780 at-a-g----caacc
i Rhinolophus_sinicus.LVEH01000134.1                     I 721 C 0
s Rhinopithecus_bieti.k119_778604                             4171  9 +      7119 gc-a-g----aagag
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124841  9 + 195417433 GC-A-G----AAGAG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239013  9 -   7961872 gc-a-g----aagag
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 77729  9 -    116970 AC-A-G----TAATC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 722 C 0
s Saguinus_bicolor.k141_161125                                8964  9 +     12412 gc-a-g----aagag
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               425  9 +      9876 gc-a-g----aagag
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16028  9 -     24931 gc-a-g----aagag
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                                908  9 +      4564 gc-a-g----aagag
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3713  9 -      7443 gc-a-g----aagag
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394618  9 - 209938924 gc-a-g----aagag
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1328  9 +     10149 gc-a-g----aagag
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                668  9 +     10417 gc-a-g----aagag
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       13503  9 +     16473 ac-a-g----cagcc
i Saiga_tatarica.SaiTat_scaffold_39512                   I 2714 I 5
s Saimiri_boliviensis.NW_024100920.1                       1110791  9 + 121099817 GC-A-G----AAGAG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32358  9 -     47369 gc-a-g----aagag
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32744  9 -     79414 gc-a-g----aagag
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29435  9 -     34454 gc-a-g----aagag
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16836  9 -     22428 gc-a-g----aagag
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31990  9 -     47109 gc-a-g----aagag
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240020  9 +   5703754 gc-a-g----aagag
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9610  9 +     21866 gc-a-g----aagag
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    118804  9 +    313613 AC-A-G----CATCC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1499 C 0
s Semnopithecus_entellus.k141_583282                          1148  9 +     11297 gc-a-g----aagag
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31541  9 +     58920 gc-a-g----aagag
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18039  9 -     45317 gc-a-g----aagag
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25697  9 -     42441 gc-a-g----aagag
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28373  9 -     29113 gc-a-g----aagag
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31450  9 -     48123 gc-a-g----aagag
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52331  6 +     77746 -----A----TAGTG
i Sigmodon_hispidus.SigHis_scaffold_20193                I 666 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1866423  9 -   1910179 gc-a-g----cagcc
i Solenodon_paradoxus.SolPar_flattened_line_126          I 608 C 0
s Sorex_araneus.JH798187.1                                 4673642  9 +  18376816 AC-A-G----CAGTC
i Sorex_araneus.JH798187.1                               I 714 C 0
s Spermophilus_dauricus.KZ294078.1                         1871248  9 +   3870691 AC-A-A----CAGCC
i Spermophilus_dauricus.KZ294078.1                       I 811 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             127977  9 +    196729 ct-g-a----cagcc
i Suricata_suricatta.SurSur_flattened_line_6629          I 1358 C 0
s Sus_scrofa.CM000828.4                                    6647214  9 +  69701581 ac-a-g----ctgcc
i Sus_scrofa.CM000828.4                                  I 1548 C 0
s Symphalangus_syndactylus.tarseq_199                       393545  9 +   1523678 gc-a-g----aagag
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                16690  9 +     22964 AT-A-G----CCACA
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 699 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194067  9 +    199430 ac-a-g----tagcc
i Tapirus_indicus.TapInd_scaffold_7432                   I 715 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108035  9 -    539355 ac-a-g----tagcc
i Tapirus_terrestris.TapTer_scaffold_755                 I 715 C 0
s Tarsius_lariang.k141_1733899                                3679  1 +      9917 --------------c
i Tarsius_lariang.k141_1733899                           I 988 C 0
s Tarsius_wallacei.k141_226975                               10475  1 +     20590 --------------c
i Tarsius_wallacei.k141_226975                           I 985 C 0
s Theropithecus_gelada.CM009954.1                           355703  9 - 186847797 GC-A-G----AAGAG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26942  9 -     33621 AT-A-G----CAGTT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 670 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22205  9 -     31044 ac-g-g----cagcc
i Tolypeutes_matacus.TolMat_scaffold_31955               I 855 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    482504  9 -    610378 gt-a-g----ccacc
i Tonatia_saurophila.TonSau_scaffold_294                 I 643 C 0
s Trachypithecus_auratus.k141_1189070                        23449  9 +     26378 gc-a-g----aagag
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36248  9 -     78344 gc-a-g----aagag
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22774  9 +     25722 gc-a-g----aagag
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31204  9 -     62838 gc-a-g----aagag
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31195  9 +     46913 gc-a-g----aagag
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11932  9 -     28527 gc-a-g----aagag
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33139  9 -     64340 gc-a-g----aagag
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31177  9 -     63452 gc-a-g----aagag
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12624  9 +     22490 gc-a-g----aagag
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          590  9 +      9911 gc-a-g----aagag
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          385  9 -     33539 gc-a-g----aagag
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258144  9 -   6242583 gc-a-g----aagag
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4163  9 +     19340 gc-a-g----aagag
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   176465  9 -    200418 ag-a-g----cagcc
i Tragulus_javanicus.TraJav_scaffold_3462                I 865 C 0
s Trichechus_manatus.JH594705.1                            6485224  8 -  10818551 ac-A-G----CAGC-
i Trichechus_manatus.JH594705.1                          I 1843 C 0
s Tupaia_chinensis.KB320699.1                              1838605  9 -   4065304 gc-a-g----caaac
i Tupaia_chinensis.KB320699.1                            I 953 C 0
s Tupaia_tana.TupTan_flattened_line_394                      12698  9 -     70247 gc-a-g----caaac
i Tupaia_tana.TupTan_flattened_line_394                  I 984 C 0
s Tursiops_truncatus.MRVK01000835.1                       17368210  9 -  33153633 ac-a-g----cagac
i Tursiops_truncatus.MRVK01000835.1                      I 731 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    6436  9 -     21056 AC-G-G----CATCC
i Uropsilus_gracilis.UroGra_scaffold_46687               I 1159 C 0
s Ursus_maritimus.KK499267.1                                184535  8 +   5085361 at-a-g----cagc-
i Ursus_maritimus.KK499267.1                             I 725 C 0
s Vicugna_pacos.KN270157.1                                   78736  9 +   5488506 ac-a-g----tagcc
i Vicugna_pacos.KN270157.1                               I 731 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                107905  9 -    112863 at-a-g----cagcc
i Vulpes_lagopus.VulLag_flattened_line_12041             I 1174 C 0
s Xerus_inauris.XerIna_scaffold_2302                        177146  9 -    224448 AT-A-A----CAGCC
i Xerus_inauris.XerIna_scaffold_2302                     I 978 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         31534  9 -     86975 at-a-g----cagcc
i Zalophus_californianus.ZalCal_flattened_line_17732     I 725 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       2960  9 -     63895 AA-G-G----CAGCA
i Zapus_hudsonius.ZapHud_scaffold_11398                  N 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639             175  9 +      3447 ac-a-g----cagac
i Ziphius_cavirostris.ZipCav_flattened_line_334639       N 0 C 0
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Spilogale_gracilis.SpiGra_flattened_line_13525              8446 6908 -     97271 I
e Neomonachus_schauinslandi.NINY01007730.1                11468589  0 -  31847680 C
e Bison_bison.KN261452.1                                     24490 10945 +    288883 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52491 474 -     68529 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     27839 831 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9509 31 +     36723 tca-atgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
s Acinonyx_jubatus.LLWD01001279.1                           815770 30 +   1699592 tta-ctct---------------------------c-----------ct---cacct------gt-----------------------------a--aa-ac-ct-----------------gt-gagc
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     28670 29 +     63021 -CA-GTCT---------------------------C-----------CT---TATTT------TT-----------------------------C--AA-AA-CA-----------------AT-GACC
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 831 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418087 30 +  29979442 tta-cttt---------------------------t-----------ct---caact------gt-----------------------------a--ga-ac-ct-----------------gt-gagc
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            218082 17 +    347723 tta-tttt---------------------------t-----------ct---caact------gt----------------------------------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 13
s Allactaga_bullata.AllBul_scaffold_20030                    20793 30 -     61208 CAA-GATT---------------------------C-----------CC---TACTT------GT-----------------------------A--AA-AC-CA-----------------GT-GAGT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50461 31 +     53615 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2488 31 +     13857 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19043 31 -     21945 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20728 31 +     32033 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             73985 30 -     84148 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aa-ca-----------------ac-agtc
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46223 30 -     78289 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aa-ca-----------------ac-agtc
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45650 30 +     55831 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aa-ca-----------------ac-agtc
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44113 30 -     64179 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aa-ga-----------------ac-agtc
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1221 30 -      3959 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aa-ga-----------------ac-agtc
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42738 30 +     45454 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aa-ca-----------------ac-agtc
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48387 30 +     70886 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aa-ga-----------------ac-agtc
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10560 30 +     30854 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aa-ca-----------------ac-agtc
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34694 30 +     42133 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aa-ca-----------------ac-agtc
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1591184 24 +   2318259 ------------------------------------------------tcctcacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Ammotragus_lervia.NIVO01071767.1                       I 5 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      179209 30 -    412891 taa-cttt---------------------------c-----------ct---cacct------at-----------------------------a--aa-aa-ta-----------------gt-gagc
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Aotus_azarae.k141_887050                                    2927 31 +     17741 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aaaga-----------------gc-agtc
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3552 31 -     15923 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aaaga-----------------gc-agtc
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673834 31 +   5030052 TCA-GTGT---------------------------C-----------TA---TGTTT------AT-----------------------------AC--A-AAAGA-----------------GC-AGTC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3828 31 -     16391 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aaaga-----------------gc-agtc
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3387 31 -     17186 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aaaga-----------------gc-agtc
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      26588  4 -     32367 CCT--A---------------------------------------------------------------------------------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  7725 30 -     15198 tta-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ta-----------------gc-gact
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276450 30 +  21539123 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aa-ga-----------------ac-agtc
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12616 30 +     48076 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aa-ga-----------------ac-agtc
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7751 30 -     28759 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aa-ga-----------------ac-agtc
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35307 30 +     44353 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aa-ga-----------------ac-agtc
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50676 30 -     71267 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aa-ga-----------------ac-agtc
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24734 30 -     33135 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aa-ga-----------------ac-agtc
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7965941 30 -  23207421 tta-cttt---------------------------t-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         2441 30 -     25979 tta-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     92182 24 +    124022 ------------------------------------------------tcctcaact------gt-----------------------------a--aa-aa-ca-----------------gt-gagt
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 5 C 0
s Bos_indicus.CM003047.1                                  20361663 24 +  48749331 ------------------------------------------------tcctcacng------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Bos_indicus.CM003047.1                                 I 5 T 55396
s Bos_mutus.JH880303.1                                      760265 24 +   1948126 ------------------------------------------------tcctcaccg------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Bos_mutus.JH880303.1                                   I 5 I 7887
s Bos_taurus.CM000203.6                                   27550369 24 -  45695690 ------------------------------------------------tcctcaccg------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Bos_taurus.CM000203.6                                  I 5 I 8328
s Bubalus_bubalis.KI419123.1                               1535378 24 -   4408762 ------------------------------------------------tcctcaccg------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Bubalus_bubalis.KI419123.1                             I 5 C 0
s Cacajao_ayresi.k141_96119                                   9540 31 +     28062 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-agtc
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44834 31 -     91139 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-agtc
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22360 31 +     95584 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-agtc
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22273 31 +    119600 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-agtc
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11925 31 +     18648 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------gc--a-aaaga-----------------ac-agtc
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11433 31 -     13885 tca-gtgt---------------------------c-----------ta---tgttt------ac-----------------------------ac--a-aaaga-----------------ac-agtc
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3527 31 -      8861 tca-gtgt---------------------------c-----------ta---tgttt------ac-----------------------------ac--a-aaaga-----------------ac-agtc
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455920 31 + 189096842 tca-gtgt---------------------------c-----------ta---tgttt------ac-----------------------------ac--a-aaaga-----------------aC-AGTC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3441 31 +      8664 tca-gtgt---------------------------c-----------ta---tgttt------ac-----------------------------ac--a-aaaga-----------------ac-agtc
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7633364 30 +  17673402 tta-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4667665 30 +   7040546 tta-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1211353 30 +   1652518 tta-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42508054 30 +  60362399 TTG-CTTT---------------------------C-----------CT---CAACC------AT-----------------------------A--AA-AT-CT-----------------GT-GAGC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    11690 30 -     23171 TTG-CTTT---------------------------C-----------CT---CAACC------AT-----------------------------A--AA-AT-CT-----------------GT-GAGC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225031 30 +   9314153 TTG-CTTT---------------------------C-----------CT---CAACC------AT-----------------------------A--AA-AT-CT-----------------GT-GAGC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41618168 30 +  59632846 TTG-CTTT---------------------------C-----------CT---CAACC------AT-----------------------------A--AA-AT-CT-----------------GT-GAGC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45109749 30 -  63665305 TTG-CTTT---------------------------C-----------CT---CAACC------AT-----------------------------A--AA-AT-CT-----------------GT-GAGC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27415186 24 -  46296322 ------------------------------------------------tcctcacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Capra_aegagrus.CM003241.1                              I 5 C 0
s Capra_hircus.CM004588.1                                 26597183 24 +  44709034 ------------------------------------------------tcctcacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Capra_hircus.CM004588.1                                I 5 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    1140 30 -     20114 ATA-TGTT---------------------------T-----------CT---TACCT------CT-----------------------------A--AA-AT-AG-----------------GT-CAAA
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           273492 24 +    496798 CCA-GTTT---------------------------T-----------CG---TACCT------GT-----------------------------A--AA-AT-CA------------------------
i Carlito_syrichta.NW_007259797.1                        C 0 I 5
s Carollia_perspicillata.CarPer_scaffold_107871               2601 30 +      9923 ttg-cttt---------------------------c-----------tt---cacct------at-----------------------------a--aa-aa-ta-----------------gc-gact
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    30436 20 -     39886 -----------------------------------------------CT-----CAT------GT-----------------------------A--AA-AG-CA-----------------AT-GAGT
i Castor_canadensis.CasCan_scaffold_39952                I 3 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     82292 30 -    217609 cta-cttt---------------------------c-----------tt---tacct------gt-----------------------------a--aa-ag-ca-----------------gt-gagc
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4999220 30 +  23392119 ACA-GATT---------------------------G-----------CT---TACTT------GT-----------------------------A--AA-CA-GG-----------------CT-TAGT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5002661 30 +  23407841 ACA-GATT---------------------------G-----------CT---TACCT------GT-----------------------------A--AA-CA-GG-----------------CT-TAGT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       65738 30 -     66877 ACA-GATT---------------------------G-----------CT---TACCT------GT-----------------------------A--AA-CA-GG-----------------CT-TAGT
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6841 31 -     12580 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------gc--a-aaaga-----------------ac-agtc
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44899 31 +     53515 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------gc--a-aaaga-----------------ac-agtc
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  375640 31 -  26074798 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aaaga-----------------ac-agtc
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9709 31 -     34880 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aaaga-----------------ac-agtc
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68805 31 -     89041 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aaaga-----------------ac-agtc
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         1138 30 -     76265 CCA-GTTT---------------------------C-----------CG---TACCT------GT-----------------------------A--AA-AT-CA-----------------TT-GAGT
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15494608 30 -  27778364 tta-cttt---------------------------t-----------cc---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gatc
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          21441 30 +     27315 tta-cttt---------------------------t-----------cc---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gatc
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143544 31 -   4669795 TCA-ATGT---------------------------C-----------TA---TATTT------AT-----------------------------AC-AA-AA-GA-----------------AC-ACGC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47283 31 +     47900 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2716 31 -     14410 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47098 31 -    148725 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29376 31 -     40656 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------at-acgc
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9335 31 +     20796 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------at-acgc
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14449 31 -     17524 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30181 31 -     34525 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13961 31 -     25376 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366548 31 -  39242232 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272275 31 +  21565898 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34640 31 -     45857 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29541 31 -     32606 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5704 31 +      8499 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28103 31 +     70610 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25063 31 +     36323 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------at-acgc
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15114 30 -     19938 tcc-gttt---------------------------c-----------ct---cgcct------ct-----------------------------a--aa-ag-ca-----------------gc-agtt
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10646 16 -     32913 tca-gtgt---------------------------c-----------ta---tgttt------a-----------------------------------------------------------------
i Cheracebus_lucifer.k141_2312002                        C 0 I 3
s Cheracebus_lugens.k141_1179667                             21059 16 -     40346 tca-gtgt---------------------------c-----------ta---tgttt------a-----------------------------------------------------------------
i Cheracebus_lugens.k141_1179667                         C 0 I 3
s Cheracebus_regulus.k141_471822                             21314 16 +    216457 tca-gtgt---------------------------c-----------ta---tgttt------a-----------------------------------------------------------------
i Cheracebus_regulus.k141_471822                         C 0 I 3
s Cheracebus_torquatus.k141_890198                           21103 16 +     39636 tca-gtgt---------------------------c-----------ta---tgttt------a-----------------------------------------------------------------
i Cheracebus_torquatus.k141_890198                       C 0 I 3
s Chinchilla_lanigera.JH722012.1                           1242119 30 -   2543920 ACA-GATT---------------------------G-----------CT---GACCT------GT-----------------------------A--TA-AC-AG-----------------GT-TAAC
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33077 31 -     52013 tca-gtgt---------------------------c-----------aa---tgttt------ac-----------------------------ac-ag-aa-ga-----------------ac-agtc
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44174 31 -    112038 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-agtc
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9725 31 +     34062 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-agtc
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345963 31 +  18827391 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12502 31 -     44032 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307349 31 - 135778131 TCA-ATGT---------------------------C-----------TA---TATTT------AT-----------------------------AC-AG-AA-GA-----------------AC-ACGC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 1792 29 +     10270 tca-gt-t---------------------------c-----------ct---tacct------gt-----------------------------g--aa-aG-CA-----------------GC-AATT
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 I 2
s Choloepus_hoffmanni.KN194906.1                            609265 29 -    839153 tca-gt-t---------------------------c-----------ct---tactt------gt-----------------------------g--aa-ag-ca-----------------gc-aatt
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               1829 31 -      4087 TCG-GTTT---------------------------C-----------CT---CACCT------GT-----------------------------T-TAC-AG-CT-----------------AC-GAGT
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             411762 31 -   2368649 TCA-ATGT---------------------------C-----------TA---TATTT------AT-----------------------------AC-AA-AA-GA-----------------AC-ACGC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381644 31 - 200372422 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5196 31 -     84244 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35809804 22 +  53390261 TTA-CTTT---------------------------G-----------CA---CATTT------GG-----------------------------A--AA-GA---------------------------
i Condylura_cristata.JH655891.1                          C 0 I 13
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          5367 29 -      8242 tta-cttt---------------------------c-----------ct----acct------gc-----------------------------a--aa-aa-ca-----------------gt-gagt
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47026 31 -     83289 TCT-TTCT---------------------------C-----------CT---TACTG------AT-----------------------------C--AAAAA-CA-----------------GT-TAGC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213118561 30 - 224834208 TCA-GTCT---------------------------C-----------CT---TACTG------AT-----------------------------C--AA-AA-CA-----------------GT-GAGC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              11676 18 +     12657 TTA-CTTT---------------------------C-----------CT---CACCT------AT-----------------------------A----------------------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 13
s Cryptoprocta_ferox.CryFer_flattened_line_16129              6981 30 +     87169 tta-ttct---------------------------c-----------ct---cacct------at-----------------------------a--aa-ac-ct-----------------gt-gagc
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    649272 21 -   1526836 TCA-GGTT---------------------------G-----------CT---CCCAT------GT-----------------------------A--AA-A----------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 5
s Ctenomys_sociabilis.CteSoc_scaffold_65050                   1160 30 -     25294 TTA-TATT---------------------------G-----------CT---TACCT------CC-----------------------------A--AA-AT-AA-----------------AT-CAAC
i Ctenomys_sociabilis.CteSoc_scaffold_65050              n 30 I 18
s Cuniculus_paca.CunPac_flattened_line_7025                  10415 30 +     36344 CCA-GGTG---------------------------G-----------CT---TACCC------AT-----------------------------A--AA-AA-GG-----------------GT-CAAT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            30838 28 +     75252 --a-gttt---------------------------a-----------ct---tacct------at-----------------------------a--aa-aa-gg-----------------gT-TAGT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2112473 28 -   2246927 T---GTTT---------------------------C-----------CT---CACCT------CC-----------------------------A--AA-AG-CA-----------------GC-AGTT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18634347 30 -  35494412 ttt-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11867588 30 -  20541912 tta-cttt---------------------------c-----------ct---cacct------at-----------------------------a--aa-aa-ta-----------------gc-gagc
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  666882 30 -   1390856 tta-cttt---------------------------t-----------cc---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gatc
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  141680 30 -    198055 tta-cttt---------------------------t-----------cc---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gatc
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   102199 30 -    115145 ATA-GGCT---------------------------G-----------TT---TACCT------GT-----------------------------A--TA-AC-TG-----------------GT-TAAC
i Dinomys_branickii.DinBra_scaffold_10381                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18953765 29 -  37912305 GCA-GATT---------------------------C-----------CT---TACCT------GA-----------------------------A---A-AG-CA-----------------AT-GAGT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   8674 30 -     10735 GCA-GATT---------------------------C-----------CT---TACCT------GA-----------------------------A--AA-AG-CA-----------------AT-GAGT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 11967 30 +     14636 ATA-GGTT---------------------------G-----------CT---TACCT------AT-----------------------------A--AA-AA-GG-----------------GT-TAGT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62858132 30 - 111700974 -CT-GTTT---------------------------C-----------CT---CGCCT------GT-----------------------------A--AC-AG-TC-----------------GCAGGGT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               8691 29 +     19438 TTA-CATT---------------------------T-----------CT----ACCT------AT-----------------------------A--AA-AA-CA-----------------GC-TCAC
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       244991 21 -    607251 ------------------------------------------------t---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Elaphurus_davidianus.JRFZ01104969.1                    I 5 C 0
s Elephantulus_edwardii.JH947257.1                         9113197 30 -  10337057 TCT-ATTT---------------------------C-----------TT---CACTT------GT-----------------------------A--AA-TG-TT-----------------GT-AAAT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          34741 30 +    110024 TCA-GTCT---------------------------T-----------CT---TATTG------AT-----------------------------C--AA-AA-CA-----------------GT-GAGC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           16669 30 +     18970 TCA-GTCT---------------------------T-----------CT---TATTG------AT-----------------------------C--AA-AA-CA-----------------GT-GAGC
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24924580 17 +  41312741 tta-cttt---------------------------t-----------ct---caact------gt----------------------------------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 13
s Eptesicus_fuscus.JH977646.1                             12581238 30 +  14770903 tta-cttt---------------------------c-----------ct---catct------at-----------------------------a--aa-aa-ca-----------------at-gagc
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3043822 30 -   4378816 tta-cttt---------------------------g-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21377756 30 +  39960074 tta-cttt---------------------------g-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              413738 30 -    498745 tta-cttt---------------------------g-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3670433 22 +   7059049 TTA-ATTT---------------------------C-----------CT---AACCT------GT-----------------------------A--TA-AG---------------------------
i Erinaceus_europaeus.JH835339.1                         I 242 C 0
s Erythrocebus_patas.Contig38                               265491 31 +  21539334 tca-ttgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           73556 30 -    133382 tta-cttt---------------------------c-----------ct---tacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              1269 30 +     25849 tta-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-at-ca-----------------gt-gagc
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186249773 30 - 206538554 tta-ctct---------------------------c-----------ct---cacct------gt-----------------------------a--aa-ac-ct-----------------gt-gagc
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185119729 30 - 205367284 tta-ctct---------------------------c-----------ct---cacct------gt-----------------------------a--aa-ac-ct-----------------gt-gagc
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                   371 30 +     25330 tta-ctct---------------------------c-----------ct---cacct------gt-----------------------------a--aa-ac-ct-----------------gt-gagc
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2925194 30 -   3816255 ATG-GGTT---------------------------G-----------CT---TACCT------GT-----------------------------A--GA-AG-AA-----------------GT-TAGT
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                4139 30 -     28519 tca-gttt---------------------------c-----------ct---tacct------gt-----------------------------a--aa-ag-ca-----------------gt-gagt
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       1144 24 +    660261 ------------------------------------------------tgctcaact------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 5 C 0
s Glis_glis.GliGli_scaffold_163929                            4005 27 -      6791 C---GATT---------------------------C-----------CT---TACCT------GT-----------------------------A--CA-AG--A-----------------GT-GAGT
i Glis_glis.GliGli_scaffold_163929                       C 0 I 1
s Gorilla_beringei.k141_3218903                                260 31 -      2763 tca-atgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Gorilla_beringei.k141_3218903                          C 0 I 4
s Gorilla_gorilla.LT578341.1                                258681 31 - 186649187 tca-atgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Gorilla_gorilla.LT578341.1                             C 0 I 4
s Graphiurus_murinus.GraMur_scaffold_10447                    5838 30 -     78134 tca-gatt---------------------------c-----------ct---tacct------at-----------------------------a--ta-ag-ca-----------------gt-gatt
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585                33385 30 -    327341 tta-ctct---------------------------c-----------cc---cacct------gt-----------------------------a--aa-ac-at-----------------gt-gagc
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14910 24 +     48891 ------------------------------------------------tcctcacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 5 C 0
s Heterocephalus_glaber.JH602082.1                         1937645 30 -  22651954 ACA-GGTT---------------------------G-----------CT---TACCT------GT-----------------------------A--AA-AG-GA-----------------AT-TAGT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                5883 28 +      8654 t---gttc---------------------------c-----------ct---cacct------gt-----------------------------a--ac-ag-ct-----------------gg-gagt
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               10384 30 -     36432 tta-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------ct-gagc
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1555410 29 -   1711038 tta-cttt---------------------------c-----------ct----acct------at-----------------------------t--aa-aa-ga-----------------gt-cagc
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_453790                246 29 +       596 TTA-CTTT---------------------------C-----------CT----ACCT------AT-----------------------------T--AA-AA-CA-----------------AT-TAGC
i Hipposideros_galeritus.HipGal_scaffold_453790          n 29 n 29
s Hoolock_leuconedys.ctg274                                    145149 31 -    630532 tca-atgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73036 30 +     83186 tta-ctct---------------------------c-----------ct---cacct------gt-----------------------------a--aa-ac-ct-----------------gt-gagc
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            74569 30 +    143317 ACA-GGTT---------------------------G-----------CT---GACTT------GT-----------------------------T--AA-AA-GC-----------------AT-TAGT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               8195 31 +     12352 tca-atgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15382 31 +     55766 tca-atgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054910 31 + 191637585 tca-atgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803788 31 +  11177569 tca-atgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      10368 30 -    135385 aca-ggtt---------------------------g-----------ct---tacct------gt-----------------------------t--aa-gg-gg-----------------gt-tagt
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     389690 30 +   7955117 TCA-GGTC---------------------------A-----------CT---TACCT------GT-----------------------------A--GA-AG-CA-----------------GT-GAGT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               12451 30 -     16823 tta-cttt---------------------------c-----------ct---cgcct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1242342 30 +   9596543 caa-gatt---------------------------c-----------cc---tatgt------gt-----------------------------a--aa-gt-ca-----------------gt-gagt
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 74291 30 -     97402 tta-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45001 30 +    110728 tca-gtgt---------------------------c-----------ta---tattt------at-----------------------------ac--a-aa-ga-----------------ac-agtc
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                       46 30 -     25587 TTA-CTTT---------------------------C-----------CT---CACTT------AC-----------------------------A--AA-AA-CA-----------------AT-GAGC
i Lasiurus_borealis.LasBor_scaffold_61236                n 922 C 0
s Leontocebus_fuscicollis.k141_3470480                         482 31 -     23187 tca-gtgt---------------------------c-----------ta---tgttt------ac-----------------------------ac--c-gaaga-----------------ac-agtc
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            795 31 -     14280 tca-gtgt---------------------------c-----------ta---tgttt------ac-----------------------------ac--c-gaaga-----------------ac-agtc
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         438 31 +      3713 tca-gtgt---------------------------c-----------ta---tgttt------ac-----------------------------ac--c-gaaga-----------------ac-agtc
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      628 31 +      8855 tca-gtgt---------------------------g-----------ta---tgttt------ac-----------------------------ac--a-aaaga-----------------ac-agtc
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5430 31 -     13645 tca-gtgt---------------------------g-----------ta---tgttt------ac-----------------------------ac--a-aaaga-----------------ac-agtc
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        815885 30 -   3914936 tta-cttt---------------------------t-----------ct---caact------gt-----------------------------a--aa-ac-ct-----------------gt-gagc
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     20967 30 +     24238 TGG-CTTT---------------------------C-----------AT---TACCT------GT-----------------------------G--AA-AG-CA-----------------GT-GAGT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             343636 30 +    662738 tta-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336426 31 -   1826925 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39087624 28 +  43346337 t---gttt---------------------------c-----------ct---cacct------gt-----------------------------g--aa-ag-ct-----------------gt-gagt
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41617323 30 +  59628241 TTG-CTTT---------------------------C-----------CT---CAACC------AT-----------------------------A--AA-AT-CT-----------------GT-GAGC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              47818 31 -     61512 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ta-----------------ac-acgc
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375480 31 -  60120075 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27748 31 +     30207 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-atgc
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2586 31 -      5035 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-atgc
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27701 31 +     30527 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38877 31 -     50087 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48622 31 +     51645 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417824 31 - 187317192 TCA-ATGT---------------------------C-----------TA---TATTT------AT-----------------------------AC-AA-AA-GA-----------------AC-ATGC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402055 31 +  25927173 TCA-ATGT---------------------------C-----------TA---TATTT------AT-----------------------------AC-AA-AA-GA-----------------AC-ACGC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51226 31 -     62418 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3757 31 +     14901 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47699 31 +     59329 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273606 31 +    668171 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2238 31 -      5049 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5404 31 +     17132 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                225626 29 -    270270 TTA-CATT---------------------------T-----------CT----ACCT------GT-----------------------------A--AA-AA-CA-----------------GC-TCAC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324894 31 +  24302211 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359725 31 -    752769 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675933 30 -    737560 tta-catt---------------------------c-----------tt---cacct------gt-----------------------------a--ag-aa-ca-----------------gt-gagc
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             223233 30 +    317179 tta-catt---------------------------c-----------tt---cacct------gt-----------------------------a--ag-aa-ca-----------------gt-gagc
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7503935 30 +  40650429 TCA-GGTC---------------------------A-----------CT---TACCT------GT-----------------------------A--GA-AG-CA-----------------GT-GAGT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       152973 29 +    207569 tta-cttt---------------------------c-----------ct----acct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             28645 17 -     74585 tta-cttt---------------------------t-----------ct---caact------gt----------------------------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 13
s Meriones_unguiculatus.MerUng_scaffold_7390                 53070 30 -    140813 TCA-GTCT---------------------------C-----------CT---CATTG------TT-----------------------------C--AA-AA-CA-----------------GT-GAGC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17432411 30 +  29670104 TCA-GTCT---------------------------C-----------CT---TACTG------GT-----------------------------C--AA-AA-CA-----------------GT-CAGC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     89920 30 +     93471 tta-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12024 31 +     17804 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------gc--a-aaaga-----------------ac-agtc
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12524 31 -     12984 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------gc--a-aaaga-----------------ac-agtc
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20843 31 -     26561 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------gc--a-aaaga-----------------ac-agtc
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49314 30 +    145209 -CT-GTTT---------------------------C-----------CT---TACCT------GA-----------------------------A--AC-AG-TT-----------------GCAGGGT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                187379 30 +    200668 tta-cttt---------------------------c-----------ct---cacct------ct-----------------------------a--aa-aa-ta-----------------gt-gagc
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966155 30 +  27267610 TCA-GTCT---------------------------T-----------CT---TATTG------AT-----------------------------C--AA-AG-CA-----------------GT-GATC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6366807 30 -   8254450 tta-tttt---------------------------c-----------ct---cccct------at-----------------------------g--aa-aa-ca-----------------at-gagc
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             44529 30 -     48117 tta-tttt---------------------------c-----------ct---cccct------at-----------------------------g--aa-aa-ca-----------------at-gagc
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         24992 31 -     27822 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11116 30 +     27589 tta-cttt---------------------------t-----------ct---caact------gt-----------------------------a--aa-ac-ct-----------------gt-gagc
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362024 30 +    437263 tta-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 181597 30 +    366855 tta-cttt---------------------------c-----------tt---tacct------at-----------------------------a--aa-aa-ca-----------------gc-gagc
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  30914 24 -     82753 ------------------------------------------------tcctcacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Moschus_moschiferus.MosMos_scaffold_13123              I 5 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21134 30 -     63510 tta-ctct---------------------------c-----------cc---cacct------gt-----------------------------a--aa-ac-at-----------------gt-gagc
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          43548 29 +     47283 tta-cttt---------------------------c-----------ct---cacct------at-----------------------------a--aa-aa--a-----------------at-gaga
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35597335 30 + 120012414 TCA-GTCT---------------------------C-----------CT---TATTC------TT-----------------------------C--AC-AC-CA-----------------GC-AAGC
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41690877 30 + 129401213 TCA-GTCT---------------------------C-----------CT---TATTC------TT-----------------------------C--AC-AC-CA-----------------GC-GAGC
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58218821 30 +  89631738 TCA-GTCT---------------------------C-----------CT---CATTC------TT-----------------------------C--AC-AC-CA-----------------GC-GAGC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39499795 30 + 130317789 TCA-GTCT---------------------------C-----------CT---TATTC------TT-----------------------------C--AC-AC-CA-----------------GC-GAGC
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               2066 30 -    124358 tca-gttt---------------------------c-----------tt---tacct------gt-----------------------------a--CA-GC-AA-----------------CT-GAGT
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 I 1
s Mustela_putorius.JH418006.1                             14357505 17 +  14710649 tta-cttt---------------------------t-----------ct---caact------gt----------------------------------------------------------------
i Mustela_putorius.JH418006.1                            C 0 I 13
s Myocastor_coypus.MyoCoy_scaffold_15261                     67103 18 +     67721 ATG-TGTT---------------------------G-----------CT---TATCT------CT-----------------------------A----------------------------------
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9795806 30 +  10118263 tta-cttt---------------------------c-----------ct---cacct------at-----------------------------a--aa-aa-ca-----------------at-gagc
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4389977 30 +   6019432 gta-cttt---------------------------c-----------cc---cacct------at-----------------------------a--aa-ag-ca-----------------at-gagc
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               386008 30 +   4330536 tta-cttt---------------------------c-----------ct---cacct------at-----------------------------a--aa-ag-ca-----------------at-gagc
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         4794 30 +     18357 TTA-CTTT---------------------------C-----------CC---CACCT------AT-----------------------------A--AA-AA-CA-----------------AT-GAGC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             948964 30 +   3037898 tca-ttct---------------------------c-----------ct---tctct------gt-----------------------------a--aa-ag-ca-----------------gt-gagc
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              31771 31 +     34575 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468589  5 -  31847680 ---------------------------------------------------------------------------------------------------------------------------T-GAGC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1234690 30 -   7148211 tta-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   130205 29 -    149072 taa-tttc---------------------------c-----------ct---cacct------ag-----------------------------a--gg-ga-ca-----------------gt-gag-
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 5
s Nomascus_annamensis.k141_1771965                           56083 31 -    132029 tca-atgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12178 31 -     16345 tca-atgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18067 31 +     22201 tca-atgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416297 31 -  22158432 tca-atgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28472 31 -     54323 tca-atgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201021 30 +   9404916 TTG-CTTT---------------------------C-----------CT---CAACC------AT-----------------------------A--AA-AT-CT-----------------GT-GAGC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11058591 57 -  11899542 ATa-tgttatagaggaactgagagctgaattctttt-----------ct---tacCT------CT-----------------------------A--AA-AT-AA-----------------GT-CAAC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1454332 30 +   2017862 tta-cttt---------------------------t-----------ct---caact------gt-----------------------------a--aa-ac-ct-----------------gt-gaga
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         441527 24 -    630418 ------------------------------------------------tcctcacct------gt-----------------------------a--aa-aa-ta-----------------gt-gagc
i Odocoileus_virginianus.KZ100018.1                      I 5 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          21083 24 +    150152 ------------------------------------------------tgctcacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Okapia_johnstoni.LVCL01S0005463.1                      I 5 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    96774 30 -    140218 TCA-GTCT---------------------------T-----------CT---TATTG------AT-----------------------------C--AA-AA-CA-----------------GT-GAGC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7347 30 -     41509 TCA-GTCT---------------------------C-----------CT---TATTA------AT-----------------------------C--AA-AA-CA-----------------GT-GAGC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8105094 30 +  10937097 ttt-tttt---------------------------t-----------tt---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               2507 30 +     11607 tct-gttt---------------------------t-----------ct---catct------gt-----------------------------a--aa-ag-ct-----------------gt-gagt
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107107626 30 - 174332312 TGG-CTTT---------------------------C-----------at---tacct------gt-----------------------------g--aa-ag-ca-----------------gt-gagt
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        41979 30 +    559221 TTG-CTTT---------------------------C-----------CT---CAACC------AT-----------------------------A--AA-AT-CT-----------------GT-GAGC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26409936 24 -  44047080 ------------------------------------------------tcctcacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Ovis_aries.CM001607.2                                  I 5 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      10559 24 +     17875 ------------------------------------------------tcctcacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Ovis_canadensis.OviCan_scaffold_67953                  I 5 C 0
s Pan_paniscus.AJFE02001037.1                                   39 31 +      1186 TCA-ATGT---------------------------C-----------TA---TGTTT------AT-----------------------------AC-AA-AA-GA-----------------AC-ACGC
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1476664 31 - 189151597 TCA-ATGt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------AC-ACGC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   27775 30 -    230217 tta-ctct---------------------------c-----------ct---cacct------gt-----------------------------a--aa-ac-ct-----------------gt-gagc
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465007 30 -  18783137 tta-ctct---------------------------c-----------ct---cacct------gt-----------------------------a--aa-ac-ct-----------------gt-gagc
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3975608 30 +   8748460 tta-ctct---------------------------c-----------ct---cacct------gt-----------------------------a--aa-ac-ct-----------------gt-gagc
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1621454 24 +   2937107 ------------------------------------------------tccttacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Pantholops_hodgsonii.KE114653.1                        I 5 C 0
s Papio_anubis.CM001495.2                                   245903 31 - 183742232 TCA-ATGT---------------------------C-----------TA---TATTT------AT-----------------------------AC-AA-AA-GA-----------------AC-ACGC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12188 31 +     21308 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294931 31 -  20919399 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24828 31 -     27687 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1507 31 +     10553 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1467 31 -     10386 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     17785 30 +     78924 tta-ctgt---------------------------c-----------ct---cacgt------gt-----------------------------a--aa-ac-ct-----------------at-gagc
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        5938 30 +      9367 GTG-GATT---------------------------C-----------CT---TACCT------GT-----------------------------A--AA-AG-CA-----------------AA-GAGC
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         250561 30 +  18517816 TCA-GTCT---------------------------C-----------CT---TATTG------AT-----------------------------C--AA-AA-CA-----------------GT-GAGC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     34741 30 -     56120 ATA-AGTT---------------------------G-----------CT---TACCA------GT-----------------------------A--AA-AT-GA-----------------GT-TGGT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               6618 30 -     63832 tta-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5149 31 +     55023 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4671 31 -     89929 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5261 31 +     40849 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acgc
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  256991 31 +  14605196 TCA-ATGT---------------------------C-----------TA---TATTT------AT-----------------------------AC-AA-AA-GA-----------------AC-ACGC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             6362 30 +     22231 TTA-CTTT---------------------------C-----------CT---CACCT------AT-----------------------------A--AA-AA-CA-----------------AT-GAGC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66542 14 +    207309 tca-gtgt---------------------------c-----------ta---tgtt-------------------------------------------------------------------------
i Pithecia_albicans.k141_1239476                         C 0 I 5
s Pithecia_chrysocephala.k141_785207                          7630 14 -     25401 tca-gtgt---------------------------c-----------ta---tgtt-------------------------------------------------------------------------
i Pithecia_chrysocephala.k141_785207                     C 0 I 5
s Pithecia_hirsuta.k141_640380                               33378 14 +     58159 tca-gtgt---------------------------c-----------ta---tgtt-------------------------------------------------------------------------
i Pithecia_hirsuta.k141_640380                           C 0 I 5
s Pithecia_mittermeieri.k141_1280039                         33654 14 +     63561 tca-gtgt---------------------------c-----------ta---tgtt-------------------------------------------------------------------------
i Pithecia_mittermeieri.k141_1280039                     C 0 I 5
s Pithecia_pissinattii.k141_878371                           33414 14 +     51148 tca-gtgt---------------------------c-----------ta---tgtt-------------------------------------------------------------------------
i Pithecia_pissinattii.k141_878371                       C 0 I 5
s Pithecia_pithecia.tarseq_165                              558384 14 -   4542175 tca-gtgt---------------------------c-----------ta---tgtt-------------------------------------------------------------------------
i Pithecia_pithecia.tarseq_165                           C 0 I 5
s Pithecia_vanzolinii.k141_1369553                           33398 14 +     51125 tca-gtgt---------------------------c-----------ta---tgtt-------------------------------------------------------------------------
i Pithecia_vanzolinii.k141_1369553                       C 0 I 5
s Platanista_gangetica.PlaMin_flattened_line_83166            3638 31 +     19503 ttaacttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9815 16 +     39866 tca-gtgt---------------------------c-----------ta---tgttt------a-----------------------------------------------------------------
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 3
s Plecturocebus_brunneus.k141_862875                          4897 16 -      9282 tca-gtgt---------------------------c-----------ta---tgttt------a-----------------------------------------------------------------
i Plecturocebus_brunneus.k141_862875                     C 0 I 3
s Plecturocebus_caligatus.k141_1382851                       44301 16 -     87950 tca-gtgt---------------------------c-----------ta---tgttt------a-----------------------------------------------------------------
i Plecturocebus_caligatus.k141_1382851                   C 0 I 3
s Plecturocebus_cinerascens.k141_1164729                     44695 16 -     88961 tca-gtgt---------------------------c-----------ta---tgttt------a-----------------------------------------------------------------
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 3
s Plecturocebus_cupreus.k141_2351393                          9393 16 -     39403 tca-gtgt---------------------------c-----------ta---tgttt------a-----------------------------------------------------------------
i Plecturocebus_cupreus.k141_2351393                     C 0 I 3
s Plecturocebus_dubius.k141_1058799                          44344 16 +     87928 tca-gtgt---------------------------c-----------ta---tgttt------a-----------------------------------------------------------------
i Plecturocebus_dubius.k141_1058799                      C 0 I 3
s Plecturocebus_grovesi.k141_2013005                          9392 16 -     60166 tca-gtat---------------------------c-----------ta---tgttt------a-----------------------------------------------------------------
i Plecturocebus_grovesi.k141_2013005                     C 0 I 3
s Plecturocebus_hoffmannsi.k141_3303950                      16313 16 -     67232 tca-gtgt---------------------------c-----------ta---tgttt------a-----------------------------------------------------------------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 3
s Plecturocebus_miltoni.k141_349282                          44245 16 -     90634 tca-gtgt---------------------------c-----------ta---tgttt------a-----------------------------------------------------------------
i Plecturocebus_miltoni.k141_349282                      C 0 I 3
s Plecturocebus_moloch.k141_1031110                          45712 16 +     89403 tca-gtat---------------------------c-----------ta---tgttt------a-----------------------------------------------------------------
i Plecturocebus_moloch.k141_1031110                      C 0 I 3
s Pongo_abelii.CM009266.2                                   181843 32 - 189387572 TCA-ATGT---------------------------C-----------TA---TGTTT------At-----------------------------ac-aa-aa-aa---a-------------ac-acac
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196586 32 -   9816681 tca-atgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-aa---a-------------ac-acac
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30351 31 +     69807 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47532 31 -     80239 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2415 28 -     12774 t---gttc---------------------------c-----------ct---cacct------gt-----------------------------a--ac-ag-ct-----------------gg-gagt
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Psammomys_obesus.NESX01036366.1                            40593 41 +     52041 TCA-GTCT---------------------------TATTGTTCATTGTT---CATTG------TT-----------------------------C--AA-AA-TG-----------------GT-GAGC
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            54513 30 -     66298 cta-cttt---------------------------c-----------tt---cacct------at-----------------------------a--aa-aa-ca-----------------gc-atgc
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7097 17 -     18639 tta-cttt---------------------------t-----------ct---caact------gt----------------------------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 13
s Pteropus_alecto.KB030862.1                               5843235 29 -  28871421 TTA-CATT---------------------------T-----------CT----ACCT------AT-----------------------------A--AA-AA-CA-----------------GA-TCAC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3539751 29 -   4952924 TTA-CATT---------------------------T-----------CT----ACCT------AT-----------------------------A--AA-AA-CA-----------------GA-TCAC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18101996 30 +  38429054 tta-ctct---------------------------c-----------ct---cacct------gt-----------------------------a--aa-ac-ct-----------------gt-gagc
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29718 31 +     91421 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156270 31 -   7812017 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10570 31 +     72585 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4048 24 -     55207 ------------------------------------------------tcctcacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagg
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 5 C 0
s Rattus_norvegicus.chr16                                 37025469 30 -  90668790 CCA-GTCT---------------------------T-----------CT---TATTC------TT-----------------------------C--AT-AC-CA-----------------AC-AAGG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2917195 29 +   3329780 ata-cttt---------------------------c-----------ct----acct------gt-----------------------------a--aa-aa-ca-----------------gt-gagt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4180 31 +      7119 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124850 31 + 195417433 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-GA-----------------AC-ACAC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239022 31 -   7961872 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 77738 29 -    116970 TTT-CATT---------------------------T-----------CT----ACCT------TT-----------------------------A--AA-AA-CA-----------------GC-TTAT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                8973 31 +     12412 tca-gtgt---------------------------c-----------aa---tgttt------ac-----------------------------ac--a-gaaga-----------------ac-agtc
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               434 31 +      9876 tca-gtgt---------------------------c-----------ta---tgttt------ac-----------------------------ac--a-gaaga-----------------ac-agtc
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16037 31 -     24931 tca-gtgt---------------------------c-----------ta---tgttt------ac-----------------------------ac--a-gaaga-----------------ac-agtc
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                                917 31 +      4564 tca-gtgc---------------------------c-----------ta---tgttt------ac-----------------------------ac--a-gaaga-----------------ac-agtc
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3722 31 -      7443 tca-gtgt---------------------------c-----------ta---tgttt------ac-----------------------------ac--a-gaaga-----------------ac-agtc
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394627 31 - 209938924 tca-gtgt---------------------------c-----------ta---tgttt------ac-----------------------------ac--a-gaaga-----------------ac-agtc
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1337 31 +     10149 tca-gtgt---------------------------c-----------ta---tgttt------ac-----------------------------ac--a-gaaga-----------------ac-agtc
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                677 31 +     10417 tca-gtgt---------------------------c-----------ta---tgttt------ac-----------------------------ac--a-gaaga-----------------ac-agtc
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       13517 24 +     16473 ------------------------------------------------tcctcacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Saiga_tatarica.SaiTat_scaffold_39512                   I 5 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110800 31 + 121099817 TCA-GTGT---------------------------C-----------TA---TGTTT------AT-----------------------------AC--A-AAAGA-----------------AC-AGTC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32367 31 -     47369 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aaaga-----------------ac-agtc
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32753 31 -     79414 tcg-gtat---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aaaga-----------------ac-agtc
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29444 31 -     34454 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aaaga-----------------ac-agtc
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16845 31 -     22428 tcg-gtat---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aaaga-----------------ac-agtc
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  31999 31 -     47109 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aaaga-----------------ac-agtc
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240029 31 +   5703754 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aaaga-----------------ac-agtc
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9619 31 +     21866 tca-gtgt---------------------------c-----------ta---tgttt------at-----------------------------ac--a-aaaga-----------------ac-agtc
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    118813 57 +    313613 TTA-ATTT---------------------------C-----------CA---CTTCTATAAGTGGAAAGACAGAAAGCTATATAGATTAACTTTA--AA-GA---------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 13
s Semnopithecus_entellus.k141_583282                          1157 31 +     11297 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31550 31 +     58920 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acag
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18048 31 -     45317 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25706 31 -     42441 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28382 31 -     29113 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31459 31 -     48123 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52337 30 +     77746 TCA-GTTT---------------------------C-----------CT---TATTG------AT-----------------------------C--AA-AA-TG-----------------GT-GAGC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             15354 24 -     97271 --------------------------------------------------------------------------------------------------------tctcagctgtaaaaaactgt-gagc
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 6908 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1866432 22 -   1910179 tta-tttt---------------------------c-----------ct---tacct------gt-----------------------------a--aa-aA---------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4673651 22 +  18376816 TTA-TTTT---------------------------T-----------CT---CACTT------AT-----------------------------A--TG-AG---------------------------
i Sorex_araneus.JH798187.1                               C 0 I 11
s Spermophilus_dauricus.KZ294078.1                         1871257 22 +   3870691 TCA-GGTC---------------------------A-----------CT---TACCT------GT-----------------------------A--GA-AA---------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 8
s Suricata_suricatta.SurSur_flattened_line_6629             127986 30 +    196729 tta-ctct---------------------------c-----------cc---cacct------gt-----------------------------a--aa-ac-at-----------------gt-gagc
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6647223 30 +  69701581 cta-cttt---------------------------c-----------ct---tacct------gt-----------------------------g--aa-ag-ca-----------------gt-gagc
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393554 31 +   1523678 tca-atgt---------------------------c-----------ta---tgttt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                16699 30 +     22964 CGA-CTTT---------------------------C-----------CT---TACCA------AT-----------------------------A--AA-AA-CA-----------------AT-GAGC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194076 30 +    199430 ttc-cttt---------------------------t-----------ct---cacct------at-----------------------------a--ag-aa-ca-----------------gt-gagg
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108044 30 -    539355 ttc-cttt---------------------------t-----------ct---cacct------at-----------------------------a--ag-aa-ca-----------------gt-gagc
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                3680 30 +      9917 cca-gttt---------------------------c-----------ct---tacct------gt-----------------------------a--aa-at-ca-----------------gt-gagt
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               10476 30 +     20590 cca-gttt---------------------------c-----------ct---tacct------gt-----------------------------a--aa-at-ca-----------------gt-gagt
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355712 31 - 186847797 TCA-ATGT---------------------------C-----------TA---TATTT------AT-----------------------------AC-AA-AA-GA-----------------AC-ACGC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26951 30 -     33621 ACA-GGTT---------------------------G-----------CT---TACCA------GT-----------------------------A--AA-CT-GA-----------------GT-TAGT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22214 30 -     31044 tca-gttt---------------------------c-----------ct---cactt------ct-----------------------------a--aa-ag-ca-----------------gc-agtt
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    482513 30 -    610378 ttg-cttt---------------------------c-----------ct---cacct------at-----------------------------a--aa-aa-ta-----------------tc-gagc
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23458 31 +     26378 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36257 31 -     78344 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22783 31 +     25722 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31213 31 -     62838 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31204 31 +     46913 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11941 31 -     28527 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33148 31 -     64340 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31186 31 -     63452 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12633 31 +     22490 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          599 31 +      9911 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          394 31 -     33539 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258153 31 -   6242583 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4172 31 +     19340 tca-atgt---------------------------c-----------ta---tattt------at-----------------------------ac-aa-aa-ga-----------------ac-acac
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   176474 29 -    200418 tta-t-tt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gaag
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485232 17 -  10818551 -------------------------------------------------------CT------GT-----------------------------G--AA-AG-CT-----------------GT-AAGC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1838614 30 -   4065304 tct-gctt---------------------------c-----------ct---tacct------gt-----------------------------a--aa-ag-ga-----------------gt-gaat
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      12707 30 -     70247 tct-gttt---------------------------c-----------ct---tacct------gt-----------------------------a--aa-ag-ga-----------------gt-gaat
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17368219 30 -  33153633 tta-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    6445 22 -     21056 AAA-CTTT---------------------------C-----------CT---CATCT------GT-----------------------------G--AA-AA---------------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 13
s Ursus_maritimus.KK499267.1                                184543 30 +   5085361 tta-cttt---------------------------t-----------ct---caact------gt-----------------------------a--aa-at-ct-----------------gt-gagc
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   78745 30 +   5488506 tta-cttt---------------------------c-----------ct---cacct------gt-----------------------------a--aa-aa-ca-----------------gt-gagc
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                107914 30 -    112863 ttg-ttgt---------------------------c-----------ct---caacc------at-----------------------------a--aa-at-ct-----------------gt-gagc
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        177155 30 -    224448 CCA-GGTC---------------------------A-----------CT---TACTT------GT-----------------------------A--AA-AG-CA-----------------GT-GATT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         31543 30 -     86975 tta-cttt---------------------------t-----------ct---caact------gt-----------------------------a--aa-ac-ct-----------------gt-gaga
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       2969 30 -     63895 CCA-GGAT---------------------------C-----------CA---TGCTT------CT-----------------------------A--AA-AC-CA-----------------GT-GAAT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639             184 30 +      3447 tta-cttt---------------------------c-----------ct---cacct------at-----------------------------a--aa-aa-ca-----------------gt-gagc
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Bison_bison.KN261452.1                                     24490 10945 +    288883 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52491 474 -     68529 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9540  4 +     36723 tgt-----------------------------g
s Acinonyx_jubatus.LLWD01001279.1                           815800  4 +   1699592 tct-----------------------------a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 5
s Acomys_cahirinus.AcoCah_scaffold_21377                     28699  4 +     63021 TGC-----------------------------A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 5
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418117  4 +  29979442 tat-----------------------------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 5
s Ailurus_fulgens.LNAC01001112.1                            218112  4 +    347723 tgt-----------------------------g
i Ailurus_fulgens.LNAC01001112.1                         I 13 I 5
s Allactaga_bullata.AllBul_scaffold_20030                    20823  4 -     61208 TGC-----------------------------G
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 5
s Allenopithecus_nigroviridis.k141_3755588                   50492  4 +     53615 tat-----------------------------g
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2519  4 +     13857 tat-----------------------------g
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19074  4 -     21945 tat-----------------------------g
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20759  4 +     32033 tat-----------------------------g
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74015  4 -     84148 ttt-----------------------------g
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46253  4 -     78289 ttt-----------------------------g
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45680  4 +     55831 ttt-----------------------------g
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44143  4 -     64179 ttt-----------------------------g
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1251  4 -      3959 ttt-----------------------------g
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42768  4 +     45454 ttt-----------------------------g
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48417  4 +     70886 ttt-----------------------------g
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10590  4 +     30854 ttt-----------------------------g
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34724  4 +     42133 ttt-----------------------------g
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1591208  4 +   2318259 taa-----------------------------a
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 5
s Anoura_caudifer.AnoCau_scaffold_1412                      179239  4 -    412891 tgg-----------------------------g
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 5
s Aotus_azarae.k141_887050                                    2958  4 +     17741 ttt-----------------------------g
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3583  4 -     15923 ttt-----------------------------g
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673865  4 +   5030052 TTT-----------------------------G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3859  4 -     16391 ttt-----------------------------g
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3418  4 -     17186 ttt-----------------------------c
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      26593  4 -     32367 TGC-----------------------------A
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 1 I 5
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  7755  4 -     15198 tgg-----------------------------g
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 5
s Ateles_geoffroyi_b.tarseq_1536                               276480  4 +  21539123 ttt-----------------------------g
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12646  4 +     48076 ttt-----------------------------g
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7781  4 -     28759 ttt-----------------------------g
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35337  4 +     44353 ttt-----------------------------g
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50706  4 -     71267 ttt-----------------------------g
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24764  4 -     33135 ttt-----------------------------g
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7965971  4 -  23207421 tgt-----------------------------a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 5
s Balaenoptera_bonaerensis.DF411050.1                         2471  4 -     25979 tgt-----------------------------a
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 5
s Beatragus_hunteri.BeaHun_scaffold_7278                     92206  4 +    124022 taa-----------------------------a
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 5
s Bison_bison.KN261452.1                                     35435  4 +    288883 caa-----------------------------a
i Bison_bison.KN261452.1                                 I 10945 I 5
s Bos_indicus.CM003047.1                                  28422575  4 -  48749331 caa-----------------------------A
i Bos_indicus.CM003047.1                                 n 55396 I 5
s Bos_mutus.JH880303.1                                      768176  4 +   1948126 caa-----------------------------a
i Bos_mutus.JH880303.1                                   I 7887 I 5
s Bos_taurus.CM000203.6                                   27558721  4 -  45695690 caa-----------------------------A
i Bos_taurus.CM000203.6                                  I 8328 I 5
s Bubalus_bubalis.KI419123.1                               1535402  4 -   4408762 taa-----------------------------a
i Bubalus_bubalis.KI419123.1                             C 0 I 5
s Cacajao_ayresi.k141_96119                                   9571  4 +     28062 ttt-----------------------------g
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44865  4 -     91139 ttt-----------------------------g
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22391  4 +     95584 ttt-----------------------------g
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22304  4 +    119600 ttt-----------------------------g
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11956  4 +     18648 ttt-----------------------------g
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11464  4 -     13885 ttt-----------------------------g
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3558  4 -      8861 ttt-----------------------------g
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455951  4 + 189096842 TTT-----------------------------G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3472  4 +      8664 ttt-----------------------------g
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7633394  4 +  17673402 tgt-----------------------------g
i Camelus_bactrianus.KN276810.1                          C 0 I 5
s Camelus_dromedarius.KN272107.1                           4667695  4 +   7040546 tgt-----------------------------g
i Camelus_dromedarius.KN272107.1                         C 0 I 5
s Camelus_ferus.KB017975.1                                 1211383  4 +   1652518 tgt-----------------------------g
i Camelus_ferus.KB017975.1                               C 0 I 5
s CanFam4.chr16                                           42508084  4 +  60362399 TGT-----------------------------A
i CanFam4.chr16                                          C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    11720  4 -     23171 TGT-----------------------------A
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 3
s Canis_lupus_dingo.QKWQ01000480.1                          225061  4 +   9314153 TGT-----------------------------A
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 3
s Canis_lupus_familiaris.chr16                            41618198  4 +  59632846 TGT-----------------------------A
i Canis_lupus_familiaris.chr16                           C 0 I 3
s Canis_lupus_orion.HG994398.1                            45109779  4 -  63665305 TGT-----------------------------A
i Canis_lupus_orion.HG994398.1                           C 0 I 3
s Capra_aegagrus.CM003241.1                               27415210  4 -  46296322 taa-----------------------------a
i Capra_aegagrus.CM003241.1                              C 0 I 5
s Capra_hircus.CM004588.1                                 26597207  4 +  44709034 taa-----------------------------a
i Capra_hircus.CM004588.1                                C 0 I 5
s Capromys_pilorides.CapPil_scaffold_26391                    1170  3 -     20114 TGT------------------------------
i Capromys_pilorides.CapPil_scaffold_26391               C 0 I 5
s Carlito_syrichta.NW_007259797.1                           273521  4 +    496798 TTT-----------------------------A
i Carlito_syrichta.NW_007259797.1                        I 5 I 5
s Carollia_perspicillata.CarPer_scaffold_107871               2631  4 +      9923 tgg-----------------------------g
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 5
s Castor_canadensis.CasCan_scaffold_39952                    30456  4 -     39886 TTC-----------------------------A
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 5
s Catagonus_wagneri.CatWag_scaffold_2839                     82322  3 -    217609 tgt------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4999250  3 +  23392119 GGT------------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 5
s Cavia_porcellus.DS562891.1                               5002691  3 +  23407841 GGT------------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 5
s Cavia_tschudii.CavTsc_scaffold_23560                       65768  3 -     66877 GGT------------------------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 5
s Cebuella_niveiventris.k141_592277                           6872  4 -     12580 ttt-----------------------------g
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44930  4 +     53515 ttt-----------------------------g
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  375671  4 -  26074798 ttt-----------------------------g
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9740  4 -     34880 ttt-----------------------------g
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68836  4 -     89041 ttt-----------------------------g
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         1168  4 -     76265 TTT-----------------------------A
i Cephalopachus_bancanus.k141_1140705                    C 0 I 5
s Ceratotherium_simum.JH767749.1                          15494638  4 -  27778364 tgt-----------------------------a
i Ceratotherium_simum.JH767749.1                         C 0 I 5
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          21471  4 +     27315 tgt-----------------------------a
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 5
s Cercocebus_atys.KQ010504.1                                143575  4 -   4669795 TAT-----------------------------G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47314  4 +     47900 tat-----------------------------g
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2747  4 -     14410 tat-----------------------------g
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47129  4 -    148725 tat-----------------------------g
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29407  4 -     40656 tat-----------------------------g
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9366  4 +     20796 tat-----------------------------g
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14480  4 -     17524 tat-----------------------------g
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30212  4 -     34525 tgt-----------------------------g
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13992  4 -     25376 tat-----------------------------g
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366579  4 -  39242232 tat-----------------------------g
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272306  4 +  21565898 tat-----------------------------g
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34671  4 -     45857 tat-----------------------------g
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29572  4 -     32606 tat-----------------------------g
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5735  4 +      8499 tat-----------------------------g
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28134  4 +     70610 tat-----------------------------g
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25094  4 +     36323 tat-----------------------------a
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15144  4 -     19938 tgt-----------------------------a
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 5
s Cheracebus_lucifer.k141_2312002                            10665  4 -     32913 TTT-----------------------------G
i Cheracebus_lucifer.k141_2312002                        I 3 C 0
s Cheracebus_lugens.k141_1179667                             21078  4 -     40346 TTT-----------------------------G
i Cheracebus_lugens.k141_1179667                         I 3 C 0
s Cheracebus_regulus.k141_471822                             21333  4 +    216457 TTT-----------------------------G
i Cheracebus_regulus.k141_471822                         I 3 C 0
s Cheracebus_torquatus.k141_890198                           21122  4 +     39636 TTT-----------------------------G
i Cheracebus_torquatus.k141_890198                       I 3 C 0
s Chinchilla_lanigera.JH722012.1                           1242149  3 -   2543920 TGC------------------------------
i Chinchilla_lanigera.JH722012.1                         C 0 I 5
s Chiropotes_albinasus.k141_1091259                          33108  4 -     52013 ttt-----------------------------g
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44205  4 -    112038 ttt-----------------------------g
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9756  4 +     34062 ttt-----------------------------g
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345994  4 +  18827391 tat-----------------------------g
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12533  4 -     44032 tat-----------------------------g
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307380  4 - 135778131 TAT-----------------------------G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            609294  4 -    839153 tgc-----------------------------a
i Choloepus_hoffmanni.KN194906.1                         C 0 I 5
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               1860  4 -      4087 TGA-----------------------------A
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 I 5
s Colobus_angolensis.KN981557.1                             411793  4 -   2368649 TAT-----------------------------G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381675  4 - 200372422 tat-----------------------------g
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5227  4 -     84244 tat-----------------------------g
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35809839  1 +  53390261 --------------------------------A
i Condylura_cristata.JH655891.1                          I 13 I 5
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          5396  4 -      8242 tat-----------------------------a
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 5
s Cricetomys_gambianus.CriGam_scaffold_14425                 47057  4 -     83289 TGT-----------------------------A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 5
s Cricetulus_griseus.LT883664.1                          213118591  4 - 224834208 TGC-----------------------------A
i Cricetulus_griseus.LT883664.1                          C 0 I 4
s Crocidura_indochinensis.CroInd_scaffold_77846              11707  1 +     12657 --------------------------------A
i Crocidura_indochinensis.CroInd_scaffold_77846          I 13 I 5
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7011  3 +     87169 tgt------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 6
s Ctenodactylus_gundi.CteGun_scaffold_65                    649298  3 -   1526836 TGT------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 5 I 5
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22039  3 +     50838 TGT------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 30 I 5
s Cuniculus_paca.CunPac_flattened_line_7025                  10445  3 +     36344 TGT------------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 5
s Dasyprocta_punctata.DasPun_flattened_line_15900            30866  3 +     75252 TGT------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 5
s Dasypus_novemcinctus.JH564415.1                          2112501  4 -   2246927 TGC-----------------------------A
i Dasypus_novemcinctus.JH564415.1                        C 0 I 5
s Delphinapterus_leucas.KZ290073.1                        18634377  4 -  35494412 tgt-----------------------------a
i Delphinapterus_leucas.KZ290073.1                       C 0 I 5
s Desmodus_rotundus.KZ672289.1                            11867618  4 -  20541912 tgg-----------------------------g
i Desmodus_rotundus.KZ672289.1                           C 0 I 5
s Dicerorhinus_sumatrensis.PEKH010002091.1                  666912  4 -   1390856 cgt-----------------------------a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 5
s Diceros_bicornis.DicBicMic_scaffold_5955                  141710  4 -    198055 tgt-----------------------------a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 5
s Dinomys_branickii.DinBra_scaffold_10381                   102229  3 -    115145 TGT------------------------------
i Dinomys_branickii.DinBra_scaffold_10381                C 0 I 5
s Dipodomys_ordii.KN672350.1                              18953794  3 -  37912305 T-T-----------------------------A
i Dipodomys_ordii.KN672350.1                             C 0 I 4
s Dipodomys_stephensi.DipSte_scaffold_89095                   8704  3 -     10735 T-T-----------------------------A
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 4
s Dolichotis_patagonum.DolPat_scaffold_80628                 11997  3 +     14636 GGT------------------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 5
s Echinops_telfairi.JH980293.1                            62858162  4 - 111700974 TGC-----------------------------A
i Echinops_telfairi.JH980293.1                           C 0 I 5
s Eidolon_helvum.AWHC01266696.1                               8720 33 +     19438 TGTTTTTATAGTGAGCTGTCTTTAAACAGCTCA
i Eidolon_helvum.AWHC01266696.1                          C 0 I 5
s Elaphurus_davidianus.JRFZ01104969.1                       245012  4 -    607251 taa-----------------------------a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 5
s Elephantulus_edwardii.JH947257.1                         9113227  4 -  10337057 TAT-----------------------------G
i Elephantulus_edwardii.JH947257.1                       C 0 I 5
s Ellobius_lutescens.LOEQ01008920.1                          34771  4 +    110024 TGT-----------------------------A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 4
s Ellobius_talpinus.LOJH01026522.1                           16699  4 +     18970 TGC-----------------------------A
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 4
s Enhydra_lutris.KZ291758.1                               24924610  4 +  41312741 tgt-----------------------------a
i Enhydra_lutris.KZ291758.1                              I 13 I 5
s Eptesicus_fuscus.JH977646.1                             12581268  4 +  14770903 tgt-----------------------------g
i Eptesicus_fuscus.JH977646.1                            C 0 I 5
s Equus_asinus.JREZ01000139.1                              3043852  4 -   4378816 tgt-----------------------------g
i Equus_asinus.JREZ01000139.1                            C 0 I 5
s Equus_caballus.CM000403.2                               21377786  4 +  39960074 tgt-----------------------------g
i Equus_caballus.CM000403.2                              C 0 I 5
s Equus_przewalskii.KK951119.1                              413768  4 -    498745 tgt-----------------------------g
i Equus_przewalskii.KK951119.1                           C 0 I 5
s Erinaceus_europaeus.JH835339.1                           3670455  1 +   7059049 --------------------------------G
i Erinaceus_europaeus.JH835339.1                         C 0 I 14
s Erythrocebus_patas.Contig38                               265522  4 +  21539334 tat-----------------------------g
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           73586  4 -    133382 tgt-----------------------------a
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 5
s Eubalaena_japonica.EubJap_flattened_line_57114              1299  4 +     25849 cgt-----------------------------a
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 I 5
s Felis_catus.CM001381.2                                 186249803  4 - 206538554 tct-----------------------------a
i Felis_catus.CM001381.2                                 C 0 I 5
s Felis_catus_fca126.CM031415.1                          185119759  4 - 205367284 tct-----------------------------a
i Felis_catus_fca126.CM031415.1                          C 0 I 5
s Felis_nigripes.FelNig_flattened_line_44075                   401  4 +     25330 tct-----------------------------a
i Felis_nigripes.FelNig_flattened_line_44075             C 0 I 5
s Fukomys_damarensis.KN121974.1                            2925224  3 -   3816255 TCT------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 5
s Galeopterus_variegatus.GalVar_scaffold_51812                4169  4 -     28519 tgt-----------------------------a
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 I 5
s Giraffa_tippelskirchi.LVKQ01S007888.1                       1168  4 +    660261 taa-----------------------------a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 5
s Glis_glis.GliGli_scaffold_163929                            4033  4 -      6791 TGC-----------------------------A
i Glis_glis.GliGli_scaffold_163929                       I 1 I 5
s Gorilla_beringei.k141_935316                                 621  4 +     34797 tat-----------------------------g
i Gorilla_beringei.k141_935316                           I 40 I 21
s Gorilla_gorilla.LT578336.1                                 75210  4 +  33314783 tat-----------------------------g
i Gorilla_gorilla.LT578336.1                             I 444 I 57
s Graphiurus_murinus.GraMur_scaffold_10447                    5869  4 -     78134 tgc-----------------------------a
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 I 5
s Helogale_parvula.HelPar_flattened_line_2585                33415  4 -    327341 tgt-----------------------------c
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 5
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14934  4 +     48891 taa-----------------------------a
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 5
s Heterocephalus_glaber.JH602082.1                         1937675  3 -  22651954 TCT------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 5
s Heterohyrax_brucei.HetBruBak_scaffold_116546                5911  4 +      8654 ggc-----------------------------a
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_38803               10414  4 -     36432 tgt-----------------------------a
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 5
s Hipposideros_armiger.JXIK01000431.1                      1555439  4 -   1711038 tgt-----------------------------a
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 5
s Hipposideros_galeritus.HipGal_scaffold_245053               1256  4 -      1435 tgt-----------------------------a
i Hipposideros_galeritus.HipGal_scaffold_245053          I 29 I 5
s Hoolock_leuconedys.ctg274                                    145180  4 -    630532 tat-----------------------------a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73066  4 +     83186 tgt-----------------------------a
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 10
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            74599  3 +    143317 GGT------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 5
s Hylobates_agilis.k141_1155965                               8226  4 +     12352 tat-----------------------------a
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15413  4 +     55766 tat-----------------------------a
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054941  4 + 191637585 tat-----------------------------a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803819  4 +  11177569 tat-----------------------------a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      10398  3 -    135385 tgt------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 5
s Ictidomys_tridecemlineatus.JH393364.1                     389720  4 +   7955117 TGT-----------------------------A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 5
s Inia_geoffrensis.IniGeo_flattened_line_69447               12481  4 -     16823 tgt-----------------------------a
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 5
s Jaculus_jaculus.JH725527.1                               1242372  4 +   9596543 tgt-----------------------------a
i Jaculus_jaculus.JH725527.1                             C 0 I 5
s Kogia_breviceps.KogBre_flattened_line_3970                 74321  4 -     97402 tgt-----------------------------a
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 5
s Lagothrix_lagothricha.k141_246028                          45031  4 +    110728 ttt-----------------------------g
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                       76  4 -     25587 TGT-----------------------------G
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 I 5
s Leontocebus_fuscicollis.k141_3470480                         513  4 -     23187 ttt-----------------------------g
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            826  4 -     14280 ttt-----------------------------g
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         469  4 +      3713 ttt-----------------------------g
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      659  4 +      8855 ttc-----------------------------g
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5461  4 -     13645 ttc-----------------------------g
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        815915  4 -   3914936 tgt-----------------------------a
i Leptonychotes_weddellii.KB714746.1                     C 0 I 5
s Lepus_americanus.LepAme_scaffold_56121                     20997  4 +     24238 TGT-----------------------------A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 5
s Lipotes_vexillifer.KE559953.1                             343666  4 +    662738 tgt-----------------------------a
i Lipotes_vexillifer.KE559953.1                          C 0 I 5
s Lophocebus_aterrimus.ctg367                               336457  4 -   1826925 tat-----------------------------g
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39087652  4 +  43346337 tgc-----------------------------c
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41617353  4 +  59628241 TGT-----------------------------A
i Lycaon_pictus.CM007581.1                               C 0 I 3
s Macaca_arctoides.k141_1757516                              47849  4 -     61512 tat-----------------------------g
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375511  4 -  60120075 tat-----------------------------g
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27779  4 +     30207 tat-----------------------------g
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2617  4 -      5035 tat-----------------------------g
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27732  4 +     30527 tat-----------------------------g
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38908  4 -     50087 tat-----------------------------g
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48653  4 +     51645 tat-----------------------------g
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417855  4 - 187317192 TAT-----------------------------G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402086  4 +  25927173 TAT-----------------------------G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51257  4 -     62418 tat-----------------------------g
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3788  4 +     14901 tat-----------------------------g
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47730  4 +     59329 tat-----------------------------g
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273637  4 +    668171 tat-----------------------------g
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2269  4 -      5049 tat-----------------------------g
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5435  4 +     17132 tat-----------------------------g
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                225655 33 -    270270 TGTTTTTATAGTGAGCTGTCTTTAAATAGCTCA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 5
s Mandrillus_leucophaeus.scaffold280                        324925  4 +  24302211 tat-----------------------------g
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359756  4 -    752769 tat-----------------------------g
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675963  4 -    737560 tgt-----------------------------a
i Manis_javanica.JSZB01003497.1                          C 0 I 5
s Manis_pentadactyla.KN006162.1                             223263  4 +    317179 tgt-----------------------------a
i Manis_pentadactyla.KN006162.1                          C 0 I 5
s Marmota_marmota.CZRN01000018.1                           7503965  4 +  40650429 TGT-----------------------------A
i Marmota_marmota.CZRN01000018.1                         C 0 I 5
s Megaderma_lyra.MegLyr_scaffold_4542                       153002  4 +    207569 tgt-----------------------------a
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_19308             28675  4 -     74585 tgt-----------------------------a
i Mellivora_capensis.MelCap_flattened_line_19308         I 13 I 5
s Meriones_unguiculatus.MerUng_scaffold_7390                 53100  4 -    140813 TGC-----------------------------A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 5
s Mesocricetus_auratus.KB708134.1                         17432441  4 +  29670104 TGC-----------------------------C
i Mesocricetus_auratus.KB708134.1                        C 0 I 4
s Mesoplodon_bidens.MesBid_scaffold_6114                     89950  4 +     93471 tgt-----------------------------a
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 5
s Mico_argentatus.k141_582562                                12055  4 +     17804 ttt-----------------------------g
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12555  4 -     12984 ttt-----------------------------g
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20874  4 -     26561 ttt-----------------------------g
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49344  4 +    145209 TGC-----------------------------A
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 5
s Micronycteris_hirsuta.MicHir_scaffold_2233                187409  4 +    200668 tgg-----------------------------g
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 5
s Microtus_ochrogaster.CM001695.1                         15966185  4 +  27267610 CGT-----------------------------A
i Microtus_ochrogaster.CM001695.1                        C 0 I 4
s Miniopterus_natalensis.LDJU01000034.1                    6366837  4 -   8254450 tgt-----------------------------g
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 5
s Miniopterus_schreibersii.MinSch_scaffold_23309             44559  4 -     48117 tgt-----------------------------g
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 5
s Miopithecus_ogouensis.k141_1534655                         25023  4 -     27822 tat-----------------------------g
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11146  4 +     27589 tgt-----------------------------a
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 5
s Monodon_monoceros.MonMon_M_scaffold_103                   362054  4 +    437263 tgt-----------------------------a
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 5
s Mormoops_blainvillei.MorMeg_scaffold_1417                 181627  4 +    366855 tgt-----------------------------g
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 5
s Moschus_moschiferus.MosMos_scaffold_13123                  30938  4 -     82753 taa-----------------------------a
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 232
s Mungos_mungo.MunMun_flattened_line_18455                   21164  4 -     63510 tgt-----------------------------c
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 5
s Murina_feae.MurFea_scaffold_17764                          43577  4 +     47283 tgt-----------------------------g
i Murina_feae.MurFea_scaffold_17764                      C 0 I 5
s Mus_caroli.LT608237.1                                   35597365  4 + 120012414 AGC-----------------------------A
i Mus_caroli.LT608237.1                                  C 0 I 5
s Mus_musculus.chr8                                       41690907  4 + 129401213 AGC-----------------------------A
i Mus_musculus.chr8                                      C 0 I 5
s Mus_pahari.LT608297.1                                   58218851  4 +  89631738 AAC-----------------------------A
i Mus_pahari.LT608297.1                                  C 0 I 5
s Mus_spretus.CM004101.1                                  39499825  4 + 130317789 AGC-----------------------------A
i Mus_spretus.CM004101.1                                 C 0 I 5
s Muscardinus_avellanarius.MusAve_scaffold_5560               2097  4 -    124358 TTC-----------------------------A
i Muscardinus_avellanarius.MusAve_scaffold_5560          I 1 I 5
s Mustela_putorius.JH418006.1                             14357535  4 +  14710649 tgt-----------------------------a
i Mustela_putorius.JH418006.1                            I 13 I 5
s Myocastor_coypus.MyoCoy_scaffold_15261                     67121  3 +     67721 TGT------------------------------
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 I 5
s Myotis_brandtii.KE162005.1                               9795836  4 +  10118263 tgt-----------------------------g
i Myotis_brandtii.KE162005.1                             C 0 I 5
s Myotis_davidii.KB100139.1                                4390007  4 +   6019432 tgt-----------------------------g
i Myotis_davidii.KB100139.1                              C 0 I 5
s Myotis_lucifugus.GL429869.1                               386038  4 +   4330536 tgt-----------------------------g
i Myotis_lucifugus.GL429869.1                            C 0 I 5
s Myotis_myotis.MyoMyo_scaffold_66571                         4824  4 +     18357 TGT-----------------------------G
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 5
s Nannospalax_galili.KL204047.1                             948994  4 +   3037898 tgc-----------------------------a
i Nannospalax_galili.KL204047.1                          C 0 I 5
s Nasalis_larvatus.k141_1350636                              31802  4 +     34575 tat-----------------------------g
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468594  4 -  31847680 TGT-----------------------------A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 5
s Neophocaena_asiaeorientalis.KZ687982.1                   1234720  4 -   7148211 tgt-----------------------------a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 5
s Nomascus_annamensis.k141_1771965                           56114  4 -    132029 tat-----------------------------a
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12209  4 -     16345 tat-----------------------------a
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18098  4 +     22201 tat-----------------------------a
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416328  4 -  22158432 tat-----------------------------a
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28503  4 -     54323 tat-----------------------------a
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201051  4 +   9404916 TGT-----------------------------A
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 5
s Octodon_degus.JH651603.1                                11058648  3 -  11899542 TGT------------------------------
i Octodon_degus.JH651603.1                               C 0 I 5
s Odobenus_rosmarus.KB229312.1                             1454362  4 +   2017862 tgt-----------------------------a
i Odobenus_rosmarus.KB229312.1                           C 0 I 5
s Odocoileus_virginianus.KZ100018.1                         441551  4 -    630418 taa-----------------------------a
i Odocoileus_virginianus.KZ100018.1                      C 0 I 5
s Okapia_johnstoni.LVCL01S0005463.1                          21107  4 +    150152 taa-----------------------------a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 5
s Ondatra_zibethicus.OndZib_scaffold_7387                    96804  4 -    140218 TGC-----------------------------A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_28377                    7377  4 -     41509 TGA-----------------------------A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 4
s Orcinus_orca.KB316932.1                                  8105124  4 +  10937097 tgt-----------------------------a
i Orcinus_orca.KB316932.1                                C 0 I 5
s Orycteropus_afer.OryAfe_flattened_line_201229               2537  4 +     11607 ggc-----------------------------g
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 I 5
s Oryctolagus_cuniculus.CM000791.1                       107107656  4 - 174332312 TGT-----------------------------A
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 5
s Otocyon_megalotis.JAEUCK010005147.1                        42009  4 +    559221 TGT-----------------------------A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 5
s Ovis_aries.CM001607.2                                   26409960  4 -  44047080 taa-----------------------------a
i Ovis_aries.CM001607.2                                  C 0 I 5
s Ovis_canadensis.OviCan_scaffold_67953                      10583  4 +     17875 taa-----------------------------a
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 5
s Pan_paniscus.AJFE02001037.1                                   70  4 +      1186 TGT-----------------------------G
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1476695  4 - 189151597 TGT-----------------------------G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   27805  4 -    230217 tct-----------------------------a
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 5
s Panthera_pardus.KV860321.1                              18465037  4 -  18783137 tct-----------------------------a
i Panthera_pardus.KV860321.1                             C 0 I 5
s Panthera_tigris.KE722367.1                               3975638  4 +   8748460 tct-----------------------------a
i Panthera_tigris.KE722367.1                             C 0 I 5
s Pantholops_hodgsonii.KE114653.1                          1621478  4 +   2937107 taa-----------------------------a
i Pantholops_hodgsonii.KE114653.1                        C 0 I 5
s Papio_anubis.CM001495.2                                   245934  4 - 183742232 TAT-----------------------------G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12219  4 +     21308 tat-----------------------------g
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294962  4 -  20919399 tat-----------------------------g
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24859  4 -     27687 tat-----------------------------g
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1538  4 +     10553 tat-----------------------------g
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1498  4 -     10386 tat-----------------------------g
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     17815  4 +     78924 agt-----------------------------a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 5
s Perognathus_longimembris.PerPac_flattened_line_89005        5968  4 +      9367 TGT-----------------------------A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 4
s Peromyscus_maniculatus.KI615324.1                         250591  4 +  18517816 TGC-----------------------------A
i Peromyscus_maniculatus.KI615324.1                      C 0 I 4
s Petromus_typicus.PetTyp_scaffold_17301                     34771  3 -     56120 TGT------------------------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 5
s Phocoena_phocoena.PhoPho_flattened_line_24159               6648  4 -     63832 tgt-----------------------------a
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 5
s Piliocolobus_badius.k141_2704958                            5180  4 +     55023 tat-----------------------------g
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4702  4 -     89929 tat-----------------------------g
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5292  4 +     40849 tat-----------------------------g
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257022  4 +  14605196 TAT-----------------------------G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             6392  4 +     22231 TGT-----------------------------G
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 5
s Pithecia_albicans.k141_1239476                             66561  4 +    207309 TTT-----------------------------G
i Pithecia_albicans.k141_1239476                         I 5 C 0
s Pithecia_chrysocephala.k141_785207                          7649  4 -     25401 TTT-----------------------------G
i Pithecia_chrysocephala.k141_785207                     I 5 C 0
s Pithecia_hirsuta.k141_640380                               33397  4 +     58159 TTT-----------------------------G
i Pithecia_hirsuta.k141_640380                           I 5 C 0
s Pithecia_mittermeieri.k141_1280039                         33673  4 +     63561 TTT-----------------------------G
i Pithecia_mittermeieri.k141_1280039                     I 5 C 0
s Pithecia_pissinattii.k141_878371                           33433  4 +     51148 TTT-----------------------------G
i Pithecia_pissinattii.k141_878371                       I 5 C 0
s Pithecia_pithecia.tarseq_165                              558403  4 -   4542175 TTT-----------------------------G
i Pithecia_pithecia.tarseq_165                           I 5 C 0
s Pithecia_vanzolinii.k141_1369553                           33417  4 +     51125 TTT-----------------------------G
i Pithecia_vanzolinii.k141_1369553                       I 5 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            3669  4 +     19503 tgt-----------------------------a
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 5
s Plecturocebus_bernhardi.k141_2549090                        9834  4 +     39866 TTT-----------------------------G
i Plecturocebus_bernhardi.k141_2549090                   I 3 C 0
s Plecturocebus_brunneus.k141_862875                          4916  4 -      9282 TTT-----------------------------G
i Plecturocebus_brunneus.k141_862875                     I 3 C 0
s Plecturocebus_caligatus.k141_1382851                       44320  4 -     87950 TTT-----------------------------G
i Plecturocebus_caligatus.k141_1382851                   I 3 C 0
s Plecturocebus_cinerascens.k141_1164729                     44714  4 -     88961 TTT-----------------------------G
i Plecturocebus_cinerascens.k141_1164729                 I 3 C 0
s Plecturocebus_cupreus.k141_2351393                          9412  4 -     39403 TTT-----------------------------G
i Plecturocebus_cupreus.k141_2351393                     I 3 C 0
s Plecturocebus_dubius.k141_1058799                          44363  4 +     87928 TTT-----------------------------G
i Plecturocebus_dubius.k141_1058799                      I 3 C 0
s Plecturocebus_grovesi.k141_2013005                          9411  4 -     60166 TTT-----------------------------G
i Plecturocebus_grovesi.k141_2013005                     I 3 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16332  4 -     67232 TTT-----------------------------G
i Plecturocebus_hoffmannsi.k141_3303950                  I 3 C 0
s Plecturocebus_miltoni.k141_349282                          44264  4 -     90634 TTT-----------------------------G
i Plecturocebus_miltoni.k141_349282                      I 3 C 0
s Plecturocebus_moloch.k141_1031110                          45731  4 +     89403 TTT-----------------------------G
i Plecturocebus_moloch.k141_1031110                      I 3 C 0
s Pongo_abelii.CM009266.2                                   181875  4 - 189387572 tat-----------------------------G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196618  4 -   9816681 tat-----------------------------g
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30382  4 +     69807 tat-----------------------------g
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47563  4 -     80239 tat-----------------------------g
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2443  4 -     12774 ggc-----------------------------a
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 I 5
s Psammomys_obesus.NESX01036366.1                            40634  4 +     52041 TGC-----------------------------A
i Psammomys_obesus.NESX01036366.1                        C 0 I 5
s Pteronotus_parnellii.KE847780.1                            54543  4 -     66298 tgt-----------------------------g
i Pteronotus_parnellii.KE847780.1                        C 0 I 5
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7127  4 -     18639 tgt-----------------------------a
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 13 I 5
s Pteropus_alecto.KB030862.1                               5843264 33 -  28871421 CATTTTTATAGTGAGCTGTCTTTAAACAGCTCA
i Pteropus_alecto.KB030862.1                             C 0 I 5
s Pteropus_vampyrus.KN525825.1                             3539780 33 -   4952924 CATTTTTATAGTGAGCTGTCTTTAAACAGCTCA
i Pteropus_vampyrus.KN525825.1                           C 0 I 5
s Puma_concolor.QAVW01001104.1                            18102026  4 +  38429054 tct-----------------------------a
i Puma_concolor.QAVW01001104.1                           C 0 I 5
s Pygathrix_cinerea.k141_1153803                             29749  4 +     91421 tat-----------------------------g
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156301  4 -   7812017 tat-----------------------------g
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10601  4 +     72585 tat-----------------------------g
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4072  4 -     55207 taa-----------------------------a
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 5
s Rattus_norvegicus.chr16                                 37025499  4 -  90668790 TGC-----------------------------A
i Rattus_norvegicus.chr16                                C 0 I 5
s Rhinolophus_sinicus.LVEH01000134.1                       2917224  4 +   3329780 tgt-----------------------------a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 5
s Rhinopithecus_bieti.k119_778604                             4211  4 +      7119 tat-----------------------------g
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124881  4 + 195417433 TAT-----------------------------G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239053  4 -   7961872 tat-----------------------------g
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 77767 33 -    116970 TGTTTTTATAGTGAGATGTCTTTAAACAGCTCA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 5
s Saguinus_bicolor.k141_161125                                9004  4 +     12412 ttt-----------------------------g
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               465  4 +      9876 ttt-----------------------------g
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16068  4 -     24931 ttt-----------------------------g
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                                948  4 +      4564 ttt-----------------------------g
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3753  4 -      7443 ttt-----------------------------g
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394658  4 - 209938924 ttt-----------------------------g
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1368  4 +     10149 ttt-----------------------------g
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                708  4 +     10417 ttt-----------------------------g
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       13541  4 +     16473 taa-----------------------------a
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 5
s Saimiri_boliviensis.NW_024100920.1                       1110831  4 + 121099817 TTT-----------------------------G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32398  4 -     47369 ttt-----------------------------g
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32784  4 -     79414 ttt-----------------------------g
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29475  4 -     34454 ttt-----------------------------g
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16876  4 -     22428 ttt-----------------------------g
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32030  4 -     47109 ttt-----------------------------g
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240060  4 +   5703754 ttt-----------------------------g
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9650  4 +     21866 ttt-----------------------------g
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    118883  1 +    313613 --------------------------------A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 13 I 5
s Semnopithecus_entellus.k141_583282                          1188  4 +     11297 tat-----------------------------g
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31581  4 +     58920 tat-----------------------------g
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18079  4 -     45317 tat-----------------------------g
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25737  4 -     42441 tat-----------------------------g
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28413  4 -     29113 tat-----------------------------g
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31490  4 -     48123 tat-----------------------------g
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52367  4 +     77746 TAC-----------------------------A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 4
s Solenodon_paradoxus.SolPar_flattened_line_126            1866454  1 -   1910179 --------------------------------G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 5
s Sorex_araneus.JH798187.1                                 4673684  1 +  18376816 --------------------------------G
i Sorex_araneus.JH798187.1                               I 11 I 5
s Spermophilus_dauricus.KZ294078.1                         1871287  4 +   3870691 TGT-----------------------------A
i Spermophilus_dauricus.KZ294078.1                       I 8 I 5
s Spilogale_gracilis.SpiGra_flattened_line_13525             15378  4 -     97271 tgt-----------------------------a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 5
s Suricata_suricatta.SurSur_flattened_line_6629             128016  4 +    196729 tgt-----------------------------c
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 5
s Sus_scrofa.CM000828.4                                    6647253  4 +  69701581 tgt-----------------------------a
i Sus_scrofa.CM000828.4                                  C 0 I 5
s Symphalangus_syndactylus.tarseq_199                       393585  4 +   1523678 tat-----------------------------a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                16729  4 +     22964 TCT-----------------------------G
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 5
s Tapirus_indicus.TapInd_scaffold_7432                      194106  4 +    199430 tgt-----------------------------a
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 5
s Tapirus_terrestris.TapTer_scaffold_755                    108074  4 -    539355 tgc-----------------------------a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 5
s Tarsius_lariang.k141_1733899                                3710  4 +      9917 ttt-----------------------------a
i Tarsius_lariang.k141_1733899                           C 0 I 5
s Tarsius_wallacei.k141_226975                               10506  4 +     20590 ttt-----------------------------a
i Tarsius_wallacei.k141_226975                           C 0 I 5
s Theropithecus_gelada.CM009954.1                           355743  4 - 186847797 TAT-----------------------------G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26981  3 -     33621 TGT------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 5
s Tolypeutes_matacus.TolMat_scaffold_31955                   22244  4 -     31044 tgc-----------------------------a
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 5
s Tonatia_saurophila.TonSau_scaffold_294                    482543  4 -    610378 tgg-----------------------------g
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 5
s Trachypithecus_auratus.k141_1189070                        23489  4 +     26378 tat-----------------------------g
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36288  4 -     78344 tat-----------------------------g
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22814  4 +     25722 tat-----------------------------g
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31244  4 -     62838 tat-----------------------------g
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31235  4 +     46913 tat-----------------------------g
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11972  4 -     28527 tat-----------------------------g
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33179  4 -     64340 tat-----------------------------g
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31217  4 -     63452 tat-----------------------------g
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12664  4 +     22490 tat-----------------------------g
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          630  4 +      9911 tat-----------------------------g
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          425  4 -     33539 tat-----------------------------g
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258184  4 -   6242583 tat-----------------------------g
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4203  4 +     19340 tat-----------------------------g
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   176503  4 -    200418 tat-----------------------------a
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 5
s Trichechus_manatus.JH594705.1                            6485249  4 -  10818551 TGC-----------------------------A
i Trichechus_manatus.JH594705.1                          C 0 I 5
s Tupaia_chinensis.KB320699.1                              1838644  4 -   4065304 tat-----------------------------g
i Tupaia_chinensis.KB320699.1                            C 0 I 5
s Tupaia_tana.TupTan_flattened_line_394                      12737  4 -     70247 tgt-----------------------------a
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 5
s Tursiops_truncatus.MRVK01000835.1                       17368249  4 -  33153633 tgt-----------------------------a
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 5
s Uropsilus_gracilis.UroGra_scaffold_46687                    6480  1 -     21056 --------------------------------A
i Uropsilus_gracilis.UroGra_scaffold_46687               I 13 I 5
s Ursus_maritimus.KK499267.1                                184573  4 +   5085361 tgt-----------------------------a
i Ursus_maritimus.KK499267.1                             C 0 I 5
s Vicugna_pacos.KN270157.1                                   78775  4 +   5488506 tgc-----------------------------g
i Vicugna_pacos.KN270157.1                               C 0 I 5
s Vulpes_lagopus.VulLag_flattened_line_12041                107944  4 -    112863 tgt-----------------------------a
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 5
s Xerus_inauris.XerIna_scaffold_2302                        177185  4 -    224448 TGT-----------------------------A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 5
s Zalophus_californianus.ZalCal_flattened_line_17732         31573  4 -     86975 tgt-----------------------------a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 5
s Zapus_hudsonius.ZapHud_scaffold_11398                       2999  4 -     63895 TGT-----------------------------A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 5
s Ziphius_cavirostris.ZipCav_flattened_line_334639             214  4 +      3447 tgt-----------------------------a
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 I 5
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_didactylus.ChoDid_scaffold_147047                 1821  2 +     10270 I
e Noctilio_leporinus.NocLep_scaffold_7894                   130234  5 -    149072 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52491 474 -     68529 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9544 21 +     36723 ggagt-----a---------------------------ttgggcct------------------g--cttc-aA
s Acinonyx_jubatus.LLWD01001279.1                           815809 20 +   1699592 tgatc-----t---------------------------ttaaatga------------------t--cttc-c-
i Acinonyx_jubatus.LLWD01001279.1                        I 5 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     28708 15 +     63021 TCACC-----T---------------------------TTAAGTGA------------------T---------
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 5 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418126 20 +  29979442 tggtc-----t---------------------------ttaaacca------------------t--cttc-c-
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 5 C 0
s Ailurus_fulgens.LNAC01001112.1                            218121 20 +    347723 tagtc-----t---------------------------ttaaacca------------------t--cttt-c-
i Ailurus_fulgens.LNAC01001112.1                         I 5 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    20832 20 -     61208 TCATC-----T---------------------------TCCAGCCA------------------T--ATTG-T-
i Allactaga_bullata.AllBul_scaffold_20030                I 5 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50496 21 +     53615 ggagt-----a---------------------------ttgagcca------------------g--cttc-aA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2523 21 +     13857 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19078 21 -     21945 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20763 21 +     32033 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74019 21 -     84148 ggagt-----a---------------------------ttgggctg------------------c--tttt-aA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46257 21 -     78289 ggagt-----a---------------------------ttgggctg------------------c--tttt-aA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45684 21 +     55831 ggagt-----a---------------------------ttgggctg------------------c--tttt-aA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44147 21 -     64179 ggagt-----a---------------------------ttgagctg------------------c--tttt-aA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1255 21 -      3959 ggagt-----a---------------------------ttgagctg------------------c--tttt-aA
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42772 21 +     45454 ggagt-----a---------------------------ttgggctg------------------c--tttt-aA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48421 21 +     70886 ggagt-----a---------------------------ttgagctg------------------c--tttt-aA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10594 21 +     30854 ggagt-----a---------------------------ttgggctg------------------c--tttt-aA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34728 21 +     42133 ggagt-----a---------------------------ttgggctg------------------c--tttt-aA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1591217 23 +   2318259 tgttc-----t--aat----------------------tgaagcca------------------t--cttc-c-
i Ammotragus_lervia.NIVO01071767.1                       I 5 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      179248 20 -    412891 gggtg-----t---------------------------gtaaggca------------------t--tttc-c-
i Anoura_caudifer.AnoCau_scaffold_1412                   I 5 C 0
s Aotus_azarae.k141_887050                                    2962 21 +     17741 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3587 21 -     15923 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673869 21 +   5030052 GGAGT-----A---------------------------TTGGGCTG------------------T--TTTC-AA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3863 21 -     16391 gcagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3422 21 -     17186 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      26602 20 -     32367 CAGGC-----A---------------------------TCAAGCCA------------------T--CTTC-A-
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 5 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  7764 20 -     15198 tggtg-----t---------------------------gtaagcca------------------t--tttc-c-
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 5 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276484 21 +  21539123 ggagt-----a---------------------------ttgggctg------------------c--tttt-aA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12650 21 +     48076 ggagt-----a---------------------------tcgggctg------------------c--tttt-aA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7785 21 -     28759 ggagt-----a---------------------------tcgggctg------------------c--tttt-aA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35341 21 +     44353 ggagt-----a---------------------------ttgggctg------------------c--tttt-aA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50710 21 -     71267 ggagt-----a---------------------------tcgggctg------------------c--tttt-aA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24768 21 -     33135 ggagt-----a---------------------------tcgggctg------------------c--tttt-aA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7965980 20 -  23207421 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Balaenoptera_acutorostrata.KI537508.1                  I 5 C 0
s Balaenoptera_bonaerensis.DF411050.1                         2480 20 -     25979 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Balaenoptera_bonaerensis.DF411050.1                    I 5 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     92215 23 +    124022 tgttc-----c--aat----------------------tgaagcca------------------t--cttc-c-
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 5 C 0
s Bison_bison.KN261452.1                                     35444 23 +    288883 TGTTC-----T------------------------AATTGAAGCCA------------------T--CTTC-C-
i Bison_bison.KN261452.1                                 I 5 C 0
s Bos_indicus.CM003047.1                                  28422584 23 -  48749331 TGTTC-----T------------------------AATTGAAGCCA------------------T--CTTC-C-
i Bos_indicus.CM003047.1                                 I 5 C 0
s Bos_mutus.JH880303.1                                      768185 23 +   1948126 TGTTC-----T------------------------AATTGAAGCCA------------------T--CTTC-C-
i Bos_mutus.JH880303.1                                   I 5 C 0
s Bos_taurus.CM000203.6                                   27558730 23 -  45695690 TGTTC-----T------------------------AATTGAAGCCA------------------T--CTTC-C-
i Bos_taurus.CM000203.6                                  I 5 C 0
s Bubalus_bubalis.KI419123.1                               1535411 23 -   4408762 tgttc-----t--aat----------------------tgaagcca------------------t--cttc-c-
i Bubalus_bubalis.KI419123.1                             I 5 C 0
s Cacajao_ayresi.k141_96119                                   9575 21 +     28062 ggagt-----a---------------------------ctgggctg------------------c--tttc-aA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44869 21 -     91139 ggagt-----a---------------------------ctgggctg------------------c--tttc-aA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22395 21 +     95584 ggagt-----a---------------------------ctgggctg------------------c--tttc-aA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22308 21 +    119600 ggagt-----a---------------------------ctgggctg------------------c--tttc-aA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11960 21 +     18648 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11468 21 -     13885 ggagt-----a---------------------------ttgggctg------------------c--tttT-GA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3562 21 -      8861 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455955 21 + 189096842 GGAGT-----A---------------------------TTGGGCTG------------------T--TTTC-AA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3476 21 +      8664 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7633403 20 +  17673402 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Camelus_bactrianus.KN276810.1                          I 5 C 0
s Camelus_dromedarius.KN272107.1                           4667704 20 +   7040546 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Camelus_dromedarius.KN272107.1                         I 5 C 0
s Camelus_ferus.KB017975.1                                 1211392 20 +   1652518 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Camelus_ferus.KB017975.1                               I 5 C 0
s CanFam4.chr16                                           42508091 20 +  60362399 TTGTC-----T---------------------------TTAAATCA------------------T--CTTC-C-
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    11727 20 -     23171 TTGTC-----T---------------------------TTAAATCA------------------T--CTTC-C-
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225068 20 +   9314153 TTGTC-----T---------------------------TTAAATCA------------------T--CTTC-C-
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            41618205 20 +  59632846 TTGTC-----T---------------------------TTAAATCA------------------T--CTTC-C-
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            45109786 20 -  63665305 TTGTC-----T---------------------------TTAAATCA------------------T--CTTC-C-
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Capra_aegagrus.CM003241.1                               27415219 23 -  46296322 tgttc-----t--aat----------------------tgaagcca------------------t--cttc-c-
i Capra_aegagrus.CM003241.1                              I 5 C 0
s Capra_hircus.CM004588.1                                 26597216 23 +  44709034 tgttc-----t--aat----------------------tgaagcca------------------t--cttc-c-
i Capra_hircus.CM004588.1                                I 5 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    1178 20 -     20114 TGAAC-----A---------------------------TTAAGCCA------------------T--CCTC-C-
i Capromys_pilorides.CapPil_scaffold_26391               I 5 C 0
s Carlito_syrichta.NW_007259797.1                           273530 20 +    496798 TGGTC-----T---------------------------TTAAGCTG------------------T--TTTC-A-
i Carlito_syrichta.NW_007259797.1                        I 5 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               2640 20 +      9923 tgacg-----t---------------------------gtaagtca------------------t--tttc-c-
i Carollia_perspicillata.CarPer_scaffold_107871          I 5 C 0
s Castor_canadensis.CasCan_scaffold_39952                    30465 17 -     39886 TCATC-----T---------------------------TTAAATCA------------------T--CT-----
i Castor_canadensis.CasCan_scaffold_39952                I 5 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     82325 19 -    217609 -ggtc-----t---------------------------ttaaatca------------------t--cttc-c-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4999258 20 +  23392119 TGGGC-----A---------------------------TTTAGCCA------------------C--CCTT-C-
i Cavia_aperea.AVPZ01000300.1                            I 5 C 0
s Cavia_porcellus.DS562891.1                               5002699 20 +  23407841 TGGGC-----A---------------------------TTAAACCA------------------T--CCTT-C-
i Cavia_porcellus.DS562891.1                             I 5 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       65776 20 -     66877 TGGGC-----A---------------------------TTAAACCA------------------T--CCTT-C-
i Cavia_tschudii.CavTsc_scaffold_23560                   I 5 C 0
s Cebuella_niveiventris.k141_592277                           6876 21 -     12580 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44934 21 +     53515 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  375675 21 -  26074798 ggagt-----a---------------------------ttgggttg------------------t--tttc-aA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9744 21 -     34880 ggagt-----a---------------------------ttgggttg------------------t--tttc-aA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68840 21 -     89041 ggagt-----a---------------------------ttgggttg------------------t--tttc-aA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         1177 20 -     76265 TGGTC-----T---------------------------TTAAGCTG------------------T--TTTC-A-
i Cephalopachus_bancanus.k141_1140705                    I 5 C 0
s Ceratotherium_simum.JH767749.1                          15494647 20 -  27778364 aggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Ceratotherium_simum.JH767749.1                         I 5 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          21480 20 +     27315 aggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 5 C 0
s Cercocebus_atys.KQ010504.1                                143579 21 -   4669795 GGAGT-----A---------------------------TTGGGCCA------------------G--CTTC-AA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47318 21 +     47900 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2751 21 -     14410 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47133 21 -    148725 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29411 21 -     40656 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9370 21 +     20796 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14484 21 -     17524 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30216 21 -     34525 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           13996 21 -     25376 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366583 21 -  39242232 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272310 21 +  21565898 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34675 21 -     45857 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29576 21 -     32606 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5739 21 +      8499 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28138 21 +     70610 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25098 21 +     36323 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15153 20 -     19938 tggcc-----t---------------------------ttaaacca------------------c--attc-c-
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 5 C 0
s Cheracebus_lucifer.k141_2312002                            10669 21 -     32913 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21082 21 -     40346 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21337 21 +    216457 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21126 21 +     39636 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1242157 19 -   2543920 TGGAC-----A---------------------------TTAAGCC-------------------T--CCTC-T-
i Chinchilla_lanigera.JH722012.1                         I 5 C 0
s Chiropotes_albinasus.k141_1091259                          33112 21 -     52013 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44209 21 -    112038 ggagt-----a---------------------------ctgggctg------------------c--tttc-aA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9760 21 +     34062 ggagt-----a---------------------------ctgggctg------------------c--tttc-aA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                345998 21 +  18827391 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12537 21 -     44032 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307384 21 - 135778131 GGAGT-----A---------------------------TTGGGCCA------------------G--CTTC-AA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 1823 20 +     10270 TTGTC-----T---------------------------TTAAACCA------------------T--CTTC-C-
i Choloepus_didactylus.ChoDid_scaffold_147047            I 2 C 0
s Choloepus_hoffmanni.KN194906.1                            609303 20 -    839153 ttgtc-----t---------------------------ttaaacca------------------t--cttc-c-
i Choloepus_hoffmanni.KN194906.1                         I 5 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               1869 20 -      4087 taatc-----c---------------------------taaagctc------------------t--ctgg-t-
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          I 5 C 0
s Colobus_angolensis.KN981557.1                             411797 21 -   2368649 GGAGT-----A---------------------------TTGGGCCA------------------G--CCTC-AA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381679 21 - 200372422 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5231 21 -     84244 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35809845 19 +  53390261 AGGTC-----T---------------------------TTAAGTTA------------------A--CA-C-T-
i Condylura_cristata.JH655891.1                          I 5 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          5405 20 -      8242 tggtc-----t---------------------------ttcagcca------------------t--cttc-c-
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 5 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47066 20 -     83289 TCACC-----T---------------------------TTAAGCCT------------------T--TTTG-T-
i Cricetomys_gambianus.CriGam_scaffold_14425             I 5 C 0
s Cricetulus_griseus.LT883664.1                          213118599 20 - 224834208 CTACC-----T---------------------------TTAAGTCT------------------T--TTTT-T-
i Cricetulus_griseus.LT883664.1                          I 4 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              11713 21 +     12657 TAATC-----C---------------------------TCAAGCTT------------------T--TTTTTT-
i Crocidura_indochinensis.CroInd_scaffold_77846          I 5 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7020 20 +     87169 tgatc-----t---------------------------ttaaacta------------------t--cttc-c-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 6 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    649306 20 -   1526836 CGGGC-----G---------------------------TTCATTCA------------------T--CTTC-C-
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 5 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22047 10 +     50838 TGGAC-----A---------------------------TTAA--------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 5 I 352
s Cuniculus_paca.CunPac_flattened_line_7025                  10453 20 +     36344 TTGGC-----A---------------------------TTAAGCCA------------------T--CCTT-C-
i Cuniculus_paca.CunPac_flattened_line_7025              I 5 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            30874 20 +     75252 TGGGC-----A---------------------------TTAAGCCA------------------T--TCTT-C-
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 5 C 0
s Dasypus_novemcinctus.JH564415.1                          2112510 21 -   2246927 TGGCC-----TT--------------------------TTAAACCA------------------T--CTTC-C-
i Dasypus_novemcinctus.JH564415.1                        I 5 C 0
s Delphinapterus_leucas.KZ290073.1                        18634386 20 -  35494412 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Delphinapterus_leucas.KZ290073.1                       I 5 C 0
s Desmodus_rotundus.KZ672289.1                            11867627 20 -  20541912 tggtg-----t---------------------------gtaagtca------------------t--tttc-c-
i Desmodus_rotundus.KZ672289.1                           I 5 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  666921 20 -   1390856 aggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 5 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  141719 20 -    198055 aggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Diceros_bicornis.DicBicMic_scaffold_5955               I 5 C 0
s Dinomys_branickii.DinBra_scaffold_10381                   102237 20 -    115145 TGGAA-----A---------------------------TTAAGCCA------------------T--ACTC-C-
i Dinomys_branickii.DinBra_scaffold_10381                I 5 C 0
s Dipodomys_ordii.KN672350.1                              18953801 47 -  37912305 TCACC-----TTCaatgccaagatctgaggatcacagtttgaacct------------------t--AATA-G-
i Dipodomys_ordii.KN672350.1                             I 4 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   8711 45 -     10735 TCACC-----TTC--AAGGCCAAGAACTGAGGATCAGTTTGAACCT------------------T--AATA-T-
i Dipodomys_stephensi.DipSte_scaffold_89095              I 4 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 12005 20 +     14636 TGAGC-----A---------------------------TTAAGCCA------------------T--CCTT-C-
i Dolichotis_patagonum.DolPat_scaffold_80628             I 5 C 0
s Echinops_telfairi.JH980293.1                            62858171 20 - 111700974 TGGCC-----T---------------------------GAAGACCC------------------T--CTTT-C-
i Echinops_telfairi.JH980293.1                           I 5 C 0
s Eidolon_helvum.AWHC01266696.1                               8758 20 +     19438 TGGTC-----T---------------------------TTAAACCA------------------T--CTTC-C-
i Eidolon_helvum.AWHC01266696.1                          I 5 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       245021 23 -    607251 tgttc-----t--aat----------------------tgaatcca------------------t--cttc-c-
i Elaphurus_davidianus.JRFZ01104969.1                    I 5 C 0
s Elephantulus_edwardii.JH947257.1                         9113236 20 -  10337057 TTGTC-----T---------------------------TAAAACTC------------------C--CTTC-C-
i Elephantulus_edwardii.JH947257.1                       I 5 C 0
s Ellobius_lutescens.LOEQ01008920.1                          34779 20 +    110024 CCACC-----T---------------------------TGAAGTCT------------------T--TTTG-T-
i Ellobius_lutescens.LOEQ01008920.1                      I 4 C 0
s Ellobius_talpinus.LOJH01026522.1                           16707 20 +     18970 CCACC-----T---------------------------TGAAGTCT------------------T--TTTG-T-
i Ellobius_talpinus.LOJH01026522.1                       I 4 C 0
s Enhydra_lutris.KZ291758.1                               24924619 20 +  41312741 tggtc-----t---------------------------ttaaacca------------------t--cttc-c-
i Enhydra_lutris.KZ291758.1                              I 5 C 0
s Eptesicus_fuscus.JH977646.1                             12581277 20 +  14770903 tggtc-----t---------------------------ttaagcca------------------t--tttc-t-
i Eptesicus_fuscus.JH977646.1                            I 5 C 0
s Equus_asinus.JREZ01000139.1                              3043861 20 -   4378816 tggtc-----t---------------------------ctaagcca------------------t--cttc-c-
i Equus_asinus.JREZ01000139.1                            I 5 C 0
s Equus_caballus.CM000403.2                               21377795 20 +  39960074 tggtc-----t---------------------------ctaagcca------------------t--cttc-c-
i Equus_caballus.CM000403.2                              I 5 C 0
s Equus_przewalskii.KK951119.1                              413777 20 -    498745 tggtc-----t---------------------------ctaagcca------------------t--gttc-c-
i Equus_przewalskii.KK951119.1                           I 5 C 0
s Erinaceus_europaeus.JH835339.1                           3670470 20 +   7059049 TAGTC-----T---------------------------CTAGACCA------------------T--CTTC-C-
i Erinaceus_europaeus.JH835339.1                         I 14 C 0
s Erythrocebus_patas.Contig38                               265526 21 +  21539334 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           73595 20 -    133382 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 5 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              1308 20 +     25849 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Eubalaena_japonica.EubJap_flattened_line_57114         I 5 C 0
s Felis_catus.CM001381.2                                 186249812 20 - 206538554 tgatc-----t---------------------------ttaaatga------------------t--cttc-c-
i Felis_catus.CM001381.2                                 I 5 C 0
s Felis_catus_fca126.CM031415.1                          185119768 20 - 205367284 tgatc-----t---------------------------ttaaatga------------------t--cttc-c-
i Felis_catus_fca126.CM031415.1                          I 5 C 0
s Felis_nigripes.FelNig_flattened_line_44075                   410 20 +     25330 tgatc-----t---------------------------ttaaatga------------------t--cttc-c-
i Felis_nigripes.FelNig_flattened_line_44075             I 5 C 0
s Fukomys_damarensis.KN121974.1                            2925232 20 -   3816255 TGGAC-----A---------------------------TTAAGCCA------------------T--CCTT-C-
i Fukomys_damarensis.KN121974.1                          I 5 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                4178 20 -     28519 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Galeopterus_variegatus.GalVar_scaffold_51812           I 5 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       1177 23 +    660261 cgctc-----t--aat----------------------tgaagcca------------------t--cttc-c-
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 5 C 0
s Glis_glis.GliGli_scaffold_163929                            4042 18 -      6791 TGGAC-----A---------------------------TCAAAC--------------------T--CTTT-A-
i Glis_glis.GliGli_scaffold_163929                       I 5 C 0
s Gorilla_beringei.k141_3218903                                295 21 -      2763 ggagt-----a---------------------------ttgggctg------------------g--cttc-aA
i Gorilla_beringei.k141_3218903                          I 4 I 28
s Gorilla_gorilla.LT578341.1                                258716 21 - 186649187 ggagt-----a---------------------------ttgggctg------------------g--cttc-aA
i Gorilla_gorilla.LT578341.1                             I 4 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    5878 20 -     78134 tgggc-----a---------------------------ttaagc--------------------tctcttt-c-
i Graphiurus_murinus.GraMur_scaffold_10447               I 5 C 0
s Helogale_parvula.HelPar_flattened_line_2585                33424 20 -    327341 tgatc-----t---------------------------ttaaacta------------------t--cttc-c-
i Helogale_parvula.HelPar_flattened_line_2585            I 5 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14943 23 +     48891 tgttc-----t--aat----------------------tgaagcca------------------t--cttc-c-
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 5 C 0
s Heterocephalus_glaber.JH602082.1                         1937683 14 -  22651954 TGGAC-----A---------------------------TTAAGCCA----------------------------
i Heterocephalus_glaber.JH602082.1                       I 5 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                5920 20 +      8654 gggtc-----t---------------------------tgaagtct------------------t--cttt-c-
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 5 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               10423 20 -     36432 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 5 C 0
s Hipposideros_armiger.JXIK01000431.1                      1555448 20 -   1711038 tggtc-----t---------------------------ttaagcca------------------c--cctc-c-
i Hipposideros_armiger.JXIK01000431.1                    I 5 C 0
s Hipposideros_galeritus.HipGal_scaffold_245053               1265 20 -      1435 tggtc-----t---------------------------ttaagcca------------------t--cctc-c-
i Hipposideros_galeritus.HipGal_scaffold_245053          I 5 C 0
s Hoolock_leuconedys.ctg274                                    145184 26 -    630532 ggagtactcca---------------------------ttgggcca------------------g--cttG-AA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73080  4 +     83186 --------------------------------------------------------------------ttc-c-
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 10 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            74607 20 +    143317 AGTGC-----A---------------------------TTAAGCCA------------------T--CTTT-C-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 5 C 0
s Hylobates_agilis.k141_1155965                               8230 26 +     12352 ggagtactcca---------------------------ttgggcca------------------g--cttc-aA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15417 26 +     55766 ggagtactcca---------------------------ttgggcca------------------g--cttc-aA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054945 26 + 191637585 ggagtactcca---------------------------ttgggcca------------------g--cttc-aA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803823 26 +  11177569 ggagtactcca---------------------------ttgggcca------------------g--cttc-aA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      10406 20 -    135385 cggac-----a---------------------------ttaagcta------------------t--cctc-t-
i Hystrix_cristata.HysCri_scaffold_5660                  I 5 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     389729 20 +   7955117 TGGGC-----G---------------------------TCAAGCCA------------------T--CTTC-C-
i Ictidomys_tridecemlineatus.JH393364.1                  I 5 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               12490 20 -     16823 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 5 C 0
s Jaculus_jaculus.JH725527.1                               1242381 20 +   9596543 ttata-----t---------------------------cCCAGCCA------------------T--ATTA-T-
i Jaculus_jaculus.JH725527.1                             I 5 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 74330 20 -     97402 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Kogia_breviceps.KogBre_flattened_line_3970             I 5 C 0
s Lagothrix_lagothricha.k141_246028                          45035 21 +    110728 ggagt-----a---------------------------ttgggctg------------------c--tttt-aA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                       85 20 -     25587 TGGTC-----T---------------------------GTAAGCCT------------------T--TTTC-T-
i Lasiurus_borealis.LasBor_scaffold_61236                I 5 I 1034
s Leontocebus_fuscicollis.k141_3470480                         517 21 -     23187 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            830 21 -     14280 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         473 21 +      3713 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      663 21 +      8855 ggagt-----t---------------------------ttgggctg------------------t--tttc-aA
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5465 21 -     13645 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        815924 20 -   3914936 tggtc-----t---------------------------ttaaacca------------------t--cttc-c-
i Leptonychotes_weddellii.KB714746.1                     I 5 C 0
s Lepus_americanus.LepAme_scaffold_56121                     21006 21 +     24238 TGGCT-----T---------------------------TAAAGCCA------------------T--TTTCTA-
i Lepus_americanus.LepAme_scaffold_56121                 I 5 C 0
s Lipotes_vexillifer.KE559953.1                             343675 20 +    662738 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Lipotes_vexillifer.KE559953.1                          I 5 C 0
s Lophocebus_aterrimus.ctg367                               336461 21 -   1826925 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39087656 18 +  43346337 --ggc-----t---------------------------gaaagccc------------------t--cttc-c-
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41617360 20 +  59628241 TTGTC-----T---------------------------TTAAATCA------------------T--CTTC-C-
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_1757516                              47853 21 -     61512 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375515 21 -  60120075 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27783 21 +     30207 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2621 21 -      5035 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27736 21 +     30527 ggagt-----a---------------------------ttgggcca------------------g--attc-aA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38912 21 -     50087 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48657 21 +     51645 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417859 21 - 187317192 GGAGT-----A---------------------------TTGGGCCA------------------G--CTTC-AA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402090 21 +  25927173 GGAGT-----A---------------------------TTGGGCCA------------------G--CTTC-AA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51261 21 -     62418 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3792 21 +     14901 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47734 21 +     59329 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273641 21 +    668171 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2273 21 -      5049 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5439 21 +     17132 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                225693 20 -    270270 TGGTC-----T---------------------------TTAAACCA------------------T--CTTC-C-
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 5 C 0
s Mandrillus_leucophaeus.scaffold280                        324929 21 +  24302211 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359760 21 -    752769 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675972 20 -    737560 tggtc-----t---------------------------ttaaacca------------------t--cttc-c-
i Manis_javanica.JSZB01003497.1                          I 5 C 0
s Manis_pentadactyla.KN006162.1                             223272 20 +    317179 tggtc-----t---------------------------ttaaacta------------------t--cttc-g-
i Manis_pentadactyla.KN006162.1                          I 5 C 0
s Marmota_marmota.CZRN01000018.1                           7503974 20 +  40650429 TGGGC-----G---------------------------TCAAGCCA------------------T--CTTC-C-
i Marmota_marmota.CZRN01000018.1                         I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       153011 20 +    207569 tggtc-----t---------------------------ttaagcta------------------t--tttc-c-
i Megaderma_lyra.MegLyr_scaffold_4542                    I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             28684 20 -     74585 tggtc-----t---------------------------ttaaacca------------------t--cttc-c-
i Mellivora_capensis.MelCap_flattened_line_19308         I 5 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53109 13 -    140813 TCACC-----T---------------------------TTAAGTG-----------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 5 C 0
s Mesocricetus_auratus.KB708134.1                         17432449 19 +  29670104 CCACC-----T---------------------------TTAAGTCT------------------T--TT-T-T-
i Mesocricetus_auratus.KB708134.1                        I 4 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     89959 20 +     93471 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 5 C 0
s Mico_argentatus.k141_582562                                12059 21 +     17804 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12559 21 -     12984 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20878 21 -     26561 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49353 20 +    145209 TAGTC-----T---------------------------GAAAACCC------------------T--CTTT-C-
i Microgale_talazaci.MicTal_scaffold_6613                I 5 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                187418 20 +    200668 tgata-----t---------------------------gtaagcca------------------c--tttc-c-
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 5 C 0
s Microtus_ochrogaster.CM001695.1                         15966193 20 +  27267610 CCACC-----T---------------------------TGAAGTCT------------------T--TTTG-T-
i Microtus_ochrogaster.CM001695.1                        I 4 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6366846 20 -   8254450 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Miniopterus_natalensis.LDJU01000034.1                  I 5 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             44568 20 -     48117 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 5 C 0
s Miopithecus_ogouensis.k141_1534655                         25027 21 -     27822 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11155 20 +     27589 tggtc-----t---------------------------ttaaacca------------------t--cttc-c-
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 5 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362063 20 +    437263 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Monodon_monoceros.MonMon_M_scaffold_103                I 5 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 181636 20 +    366855 tggtc-----t---------------------------ttaagcca------------------t--ttcc-c-
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 5 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  31174 23 -     82753 TGTTC-----T------------------------AATTGAAGCCA------------------T--CTTC-C-
i Moschus_moschiferus.MosMos_scaffold_13123              I 232 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21173 20 -     63510 tgatc-----t---------------------------ttaaacca------------------t--cttc-c-
i Mungos_mungo.MunMun_flattened_line_18455               I 5 C 0
s Murina_feae.MurFea_scaffold_17764                          43586 20 +     47283 cggtc-----t---------------------------ttaagcca------------------t--tttc-t-
i Murina_feae.MurFea_scaffold_17764                      I 5 I 243
s Mus_caroli.LT608237.1                                   35597374 14 + 120012414 TCACC-----T---------------------------TTAAGTTT----------------------------
i Mus_caroli.LT608237.1                                  I 5 I 6
s Mus_musculus.chr8                                       41690916 22 + 129401213 Tcacc-----t---------------------------ttaagttttt----------------t--tttt-c-
i Mus_musculus.chr8                                      I 5 C 0
s Mus_pahari.LT608297.1                                   58218860 38 +  89631738 TCAcc-----t---------------------------ttaagttttttattttttattttattt--tttg-c-
i Mus_pahari.LT608297.1                                  I 5 C 0
s Mus_spretus.CM004101.1                                  39499834 24 + 130317789 TCacc-----t---------------------------ttaagttttt----------------ttttttt-t-
i Mus_spretus.CM004101.1                                 I 5 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               2106  1 -    124358 T-------------------------------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_5560          I 5 I 626
s Mustela_putorius.JH418006.1                             14357544 20 +  14710649 tggtc-----t---------------------------ttaaacca------------------t--cttc-c-
i Mustela_putorius.JH418006.1                            I 5 C 0
s Myocastor_coypus.MyoCoy_scaffold_15261                     67129 20 +     67721 TGAAT-----A---------------------------TTAAGCTA------------------T--CTTC-C-
i Myocastor_coypus.MyoCoy_scaffold_15261                 I 5 C 0
s Myotis_brandtii.KE162005.1                               9795845 20 +  10118263 tggtc-----t---------------------------ttaagcca------------------t--tttc-t-
i Myotis_brandtii.KE162005.1                             I 5 C 0
s Myotis_davidii.KB100139.1                                4390016 20 +   6019432 ttgtc-----t---------------------------ttaagcca------------------t--tttc-t-
i Myotis_davidii.KB100139.1                              I 5 C 0
s Myotis_lucifugus.GL429869.1                               386047 20 +   4330536 tggtc-----t---------------------------ttaagcca------------------t--tttc-t-
i Myotis_lucifugus.GL429869.1                            I 5 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         4833 20 +     18357 TGGTC-----T---------------------------TTAAGCCA------------------T--TTTC-T-
i Myotis_myotis.MyoMyo_scaffold_66571                    I 5 C 0
s Nannospalax_galili.KL204047.1                             949003 17 +   3037898 tcacc-----t---------------------------ttaag---------------------t--ctta-t-
i Nannospalax_galili.KL204047.1                          I 5 C 0
s Nasalis_larvatus.k141_1350636                              31806 21 +     34575 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468603 20 -  31847680 TGGTC-----T---------------------------TTAAACCA------------------T--CTTC-C-
i Neomonachus_schauinslandi.NINY01007730.1               I 5 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1234729 20 -   7148211 tagtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Neophocaena_asiaeorientalis.KZ687982.1                 I 5 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   130239 20 -    149072 tggtc-----t---------------------------tgaagcca------------------t--tttt-c-
i Noctilio_leporinus.NocLep_scaffold_7894                I 5 C 0
s Nomascus_annamensis.k141_1771965                           56118 26 -    132029 ggagtactcca---------------------------ttgggcca------------------g--cttc-aA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12213 26 -     16345 ggagtacgcca---------------------------ttgggcca------------------g--cttc-aA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18102 26 +     22201 ggagtactcca---------------------------ttgggcca------------------g--cttc-aA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416332 26 -  22158432 ggagtactcca---------------------------ttgggcca------------------g--cttc-aA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28507 26 -     54323 ggagtactcca---------------------------ttgggcca------------------g--cttc-aA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201060 20 +   9404916 ttgtt-----t---------------------------ttaaatca------------------t--cttc-c-
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 5 C 0
s Octodon_degus.JH651603.1                                11058656 20 -  11899542 TGGAG-----A---------------------------TTATGCCA------------------T--TCTC-C-
i Octodon_degus.JH651603.1                               I 5 C 0
s Odobenus_rosmarus.KB229312.1                             1454371 20 +   2017862 tggtc-----t---------------------------ttaaacca------------------t--cttc-c-
i Odobenus_rosmarus.KB229312.1                           I 5 C 0
s Odocoileus_virginianus.KZ100018.1                         441560 23 -    630418 tgttc-----t--aat----------------------tgaatcca------------------t--cttc-c-
i Odocoileus_virginianus.KZ100018.1                      I 5 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          21116 23 +    150152 tgctc-----t--aat----------------------tgaagcca------------------t--cttc-c-
i Okapia_johnstoni.LVCL01S0005463.1                      I 5 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    96812 20 -    140218 CCACC-----T---------------------------TGAAGTCT------------------G--TTTG-T-
i Ondatra_zibethicus.OndZib_scaffold_7387                I 4 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7385 20 -     41509 CTACC-----T---------------------------TTAAGTCT------------------C--TTTG-T-
i Onychomys_torridus.OnyTor_scaffold_28377               I 4 C 0
s Orcinus_orca.KB316932.1                                  8105133 20 +  10937097 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Orcinus_orca.KB316932.1                                I 5 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               2546 20 +     11607 tggtc-----t---------------------------taaagccc------------------t--cttc-t-
i Orycteropus_afer.OryAfe_flattened_line_201229          I 5 C 0
s Oryctolagus_cuniculus.CM000791.1                       107107665 21 - 174332312 TGGCT-----T---------------------------TAAAGCCA------------------T--TTTCTA-
i Oryctolagus_cuniculus.CM000791.1                       I 5 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42018 20 +    559221 TTGTC-----T---------------------------TTAAATCA------------------T--CTGC-C-
i Otocyon_megalotis.JAEUCK010005147.1                    I 5 C 0
s Ovis_aries.CM001607.2                                   26409969 23 -  44047080 tgttc-----t--aat----------------------tgaagcca------------------t--cttc-c-
i Ovis_aries.CM001607.2                                  I 5 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      10592 23 +     17875 tgttc-----t--aat----------------------tgaagcca------------------t--cttc-c-
i Ovis_canadensis.OviCan_scaffold_67953                  I 5 C 0
s Pan_paniscus.AJFE02001037.1                                   74 21 +      1186 GGAGT-----A---------------------------TTGCGCCG------------------G--CTTC-AA
i Pan_paniscus.AJFE02001037.1                            C 0 I 28
s Pan_troglodytes.CM009242.2                               1476699 21 - 189151597 GGAGT-----A---------------------------TTGGGCCG------------------G--CTTC-AA
i Pan_troglodytes.CM009242.2                             C 0 I 28
s Panthera_onca.PanOnc_flattened_line_3271                   27814 20 -    230217 tgatc-----t---------------------------ttaaatga------------------t--cttc-c-
i Panthera_onca.PanOnc_flattened_line_3271               I 5 C 0
s Panthera_pardus.KV860321.1                              18465046 20 -  18783137 tgatc-----t---------------------------ttaaatga------------------t--cttc-c-
i Panthera_pardus.KV860321.1                             I 5 C 0
s Panthera_tigris.KE722367.1                               3975647 20 +   8748460 tgatc-----t---------------------------ttaaatga------------------t--cttc-c-
i Panthera_tigris.KE722367.1                             I 5 C 0
s Pantholops_hodgsonii.KE114653.1                          1621487 23 +   2937107 tgttc-----t--aat----------------------tgaagcca------------------t--cttt-c-
i Pantholops_hodgsonii.KE114653.1                        I 5 C 0
s Papio_anubis.CM001495.2                                   245938 21 - 183742232 GGAGT-----A---------------------------TTGGGCCA------------------G--CTTC-AA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12223 21 +     21308 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294966 21 -  20919399 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24863 21 -     27687 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1542 21 +     10553 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1502 21 -     10386 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     17824 20 +     78924 tgatc-----t---------------------------ttatacta------------------t--cttc-c-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 5 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        5976 46 +      9367 TCACC-----TT-TAGGCCAAGATCTGAGGATCACAGTTTGAACTT------------------T--AATC-T-
i Perognathus_longimembris.PerPac_flattened_line_89005   I 4 C 0
s Peromyscus_maniculatus.KI615324.1                         250599 20 +  18517816 CCACC-----T---------------------------TTAAGTCT------------------T--TTTG-T-
i Peromyscus_maniculatus.KI615324.1                      I 4 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     34779 20 -     56120 TGGAC-----A---------------------------TTAATCCA------------------T--CCTC-C-
i Petromus_typicus.PetTyp_scaffold_17301                 I 5 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               6657 20 -     63832 tagtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 5 C 0
s Piliocolobus_badius.k141_2704958                            5184 21 +     55023 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4706 21 -     89929 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5296 21 +     40849 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257026 21 +  14605196 GGAGT-----A---------------------------TTGGGCCA------------------G--CTTC-AA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             6401 20 +     22231 TGGTC-----T---------------------------TTAAGCCA------------------T--TTTC-T-
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 5 C 0
s Pithecia_albicans.k141_1239476                             66565 21 +    207309 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7653 21 -     25401 GGAGT-----T---------------------------CTGGGCTG------------------C--TTTC-AA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33401 21 +     58159 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33677 21 +     63561 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33437 21 +     51148 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558407 21 -   4542175 GGAGT-----T---------------------------CTGGGCTG------------------C--TTTC-AA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33421 21 +     51125 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            3678 20 +     19503 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Platanista_gangetica.PlaMin_flattened_line_83166       I 5 C 0
s Plecturocebus_bernhardi.k141_2549090                        9838 21 +     39866 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4920 21 -      9282 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44324 21 -     87950 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44718 21 -     88961 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9416 21 -     39403 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44367 21 +     87928 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9415 21 -     60166 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16336 21 -     67232 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44268 21 -     90634 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45735 21 +     89403 GGAGT-----A---------------------------CTGGGCTG------------------C--TTTC-AA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181879 21 - 189387572 GGAGT-----A---------------------------TTGGGCTG------------------G--CTTC-AA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196622 21 -   9816681 ggagt-----a---------------------------ttgggctg------------------g--cttc-aA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30386 21 +     69807 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47567 21 -     80239 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2452 20 -     12774 gggtc-----t---------------------------tgaagtct------------------t--cttt-c-
i Procavia_capensis.ProCapCap_scaffold_128773            I 5 C 0
s Psammomys_obesus.NESX01036366.1                            40643 13 +     52041 TCACC-----T---------------------------TTAAGTG-----------------------------
i Psammomys_obesus.NESX01036366.1                        I 5 C 0
s Pteronotus_parnellii.KE847780.1                            54552 20 -     66298 tgatt-----t---------------------------ttaagcca------------------t--tttc-c-
i Pteronotus_parnellii.KE847780.1                        I 5 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7136 20 -     18639 tggtc-----t---------------------------ttaaacca------------------t--cttc-c-
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 5 C 0
s Pteropus_alecto.KB030862.1                               5843302 20 -  28871421 TGGTC-----T---------------------------TTAAACCG------------------T--CTTC-C-
i Pteropus_alecto.KB030862.1                             I 5 C 0
s Pteropus_vampyrus.KN525825.1                             3539818 20 -   4952924 TGGTC-----T---------------------------TTAAACCG------------------T--CTTC-C-
i Pteropus_vampyrus.KN525825.1                           I 5 C 0
s Puma_concolor.QAVW01001104.1                            18102035 20 +  38429054 tgatc-----t---------------------------ttaaatga------------------t--cttc-c-
i Puma_concolor.QAVW01001104.1                           I 5 C 0
s Pygathrix_cinerea.k141_1153803                             29753 21 +     91421 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156305 21 -   7812017 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10605 21 +     72585 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4081 23 -     55207 tgttc-----t--aat----------------------tgaaccca------------------t--cttc-c-
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 5 C 0
s Rattus_norvegicus.chr16                                 37025508 20 -  90668790 TCACC-----T---------------------------TTCAATCT------------------T--TTTG-C-
i Rattus_norvegicus.chr16                                I 5 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2917233 20 +   3329780 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Rhinolophus_sinicus.LVEH01000134.1                     I 5 C 0
s Rhinopithecus_bieti.k119_778604                             4215 21 +      7119 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124885 21 + 195417433 GGAGT-----A---------------------------TTGGGCCA------------------G--CTTC-AA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239057 21 -   7961872 ggagt-----a---------------------------ttgggcca------------------g--cttc-aA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 77805 20 -    116970 TGGTC-----T---------------------------TTAAACCA------------------T--CTTC-C-
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 5 C 0
s Saguinus_bicolor.k141_161125                                9008 21 +     12412 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               469 21 +      9876 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16072 21 -     24931 ggagt-----a---------------------------ctgggctg------------------t--tttc-aA
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                                952 21 +      4564 ggagt-----a---------------------------ctgggctg------------------t--tttc-aA
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3757 21 -      7443 ggagt-----a---------------------------ctgggctg------------------t--tttc-aA
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394662 21 - 209938924 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1372 21 +     10149 ggagt-----a---------------------------ctgggctg------------------t--tttc-aA
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                712 21 +     10417 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       13550 23 +     16473 tgttc-----t--aat----------------------tgaagcca------------------t--cttc-c-
i Saiga_tatarica.SaiTat_scaffold_39512                   I 5 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110835 21 + 121099817 GGAGT-----A---------------------------TTGGGCTG------------------T--TTCC-AA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32402 21 -     47369 ggagt-----a---------------------------ttgggctg------------------t--ttcC-AA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32788 21 -     79414 ggagt-----a---------------------------ttgggctg------------------t--ttcC-AA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29479 21 -     34454 ggagt-----a---------------------------ttgggctg------------------t--ttcC-AA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16880 21 -     22428 ggaat-----a---------------------------ttgggctg------------------t--ttcC-AA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32034 21 -     47109 ggagt-----a---------------------------ttgggctg------------------t--ttcC-AA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240064 21 +   5703754 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9654 21 +     21866 ggagt-----a---------------------------ttgggctg------------------t--tttc-aA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    118889 18 +    313613 TTGTC-----T---------------------------TTAAGTTA------------------A---T-C-T-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 5 C 0
s Semnopithecus_entellus.k141_583282                          1192 21 +     11297 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31585 21 +     58920 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18083 21 -     45317 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25741 21 -     42441 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28417 21 -     29113 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31494 21 -     48123 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52375 20 +     77746 CTACC-----C---------------------------TTACATCT------------------T--TTTG-T-
i Sigmodon_hispidus.SigHis_scaffold_20193                I 4 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1866460 20 -   1910179 CTGTC-----T---------------------------TTAAGCCA------------------T--ATTC-C-
i Solenodon_paradoxus.SolPar_flattened_line_126          I 5 C 0
s Sorex_araneus.JH798187.1                                 4673690 20 +  18376816 TGATC-----C---------------------------CTAAGCCa------------------t--tttt-a-
i Sorex_araneus.JH798187.1                               I 5 C 0
s Spermophilus_dauricus.KZ294078.1                         1871296 20 +   3870691 TGGGC-----G---------------------------TCAAGCCA------------------T--CTTC-C-
i Spermophilus_dauricus.KZ294078.1                       I 5 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             15387 20 -     97271 tggtc-----t---------------------------ttaaacca------------------t--cttc-c-
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 5 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128025 20 +    196729 tgatc-----t---------------------------ttaaacca------------------t--cttc-c-
i Suricata_suricatta.SurSur_flattened_line_6629          I 5 C 0
s Sus_scrofa.CM000828.4                                    6647262 20 +  69701581 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Sus_scrofa.CM000828.4                                  I 5 C 0
s Symphalangus_syndactylus.tarseq_199                       393589 26 +   1523678 ggagtactcca---------------------------ttgggcca------------------g--cttc-aA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                16738 17 +     22964 TTGTC-----T---------------------------TTAA---A------------------T--CTTC-T-
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 5 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194115 20 +    199430 tggtc-----t---------------------------ttaagcca------------------t--gttc-t-
i Tapirus_indicus.TapInd_scaffold_7432                   I 5 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108083 20 -    539355 tggtc-----t---------------------------ttaagcca------------------t--gttc-t-
i Tapirus_terrestris.TapTer_scaffold_755                 I 5 C 0
s Tarsius_lariang.k141_1733899                                3719 20 +      9917 tggtc-----t---------------------------ttaagctg------------------a--cttc-a-
i Tarsius_lariang.k141_1733899                           I 5 C 0
s Tarsius_wallacei.k141_226975                               10515 20 +     20590 tggtc-----t---------------------------ttaagctg------------------a--cttc-a-
i Tarsius_wallacei.k141_226975                           I 5 C 0
s Theropithecus_gelada.CM009954.1                           355747 21 - 186847797 GGAGT-----A---------------------------TTGGGCCA------------------G--CTTC-AA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              26989 20 -     33621 TGGAC-----A---------------------------GTAAGCTA------------------T--CTTC-C-
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 5 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22253 20 -     31044 tggcc-----t---------------------------ttgaacca------------------t--cttc-c-
i Tolypeutes_matacus.TolMat_scaffold_31955               I 5 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    482552 20 -    610378 tgatg-----t---------------------------gtaagcta------------------t--tttt-c-
i Tonatia_saurophila.TonSau_scaffold_294                 I 5 C 0
s Trachypithecus_auratus.k141_1189070                        23493 21 +     26378 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36292 21 -     78344 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22818 21 +     25722 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31248 21 -     62838 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31239 21 +     46913 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11976 21 -     28527 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33183 21 -     64340 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31221 21 -     63452 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12668 21 +     22490 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          634 21 +      9911 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          429 21 -     33539 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258188 21 -   6242583 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4207 21 +     19340 ggagt-----a---------------------------ttgggcca------------------t--cttc-aA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   176512 23 -    200418 tggtc-----t--a--g------t--------------tgaagctg------------------t--cttc-c-
i Tragulus_javanicus.TraJav_scaffold_3462                I 5 C 0
s Trichechus_manatus.JH594705.1                            6485258 20 -  10818551 TAGTC-----T---------------------------TAAAGCCT------------------T--CTTC-C-
i Trichechus_manatus.JH594705.1                          I 5 C 0
s Tupaia_chinensis.KB320699.1                              1838653 20 -   4065304 gaatc-----t---------------------------ttaagcca------------------g--cttc-c-
i Tupaia_chinensis.KB320699.1                            I 5 C 0
s Tupaia_tana.TupTan_flattened_line_394                      12746 20 -     70247 gaatc-----t---------------------------ttaagcca------------------g--cttc-c-
i Tupaia_tana.TupTan_flattened_line_394                  I 5 C 0
s Tursiops_truncatus.MRVK01000835.1                       17368258 20 -  33153633 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Tursiops_truncatus.MRVK01000835.1                      I 5 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    6486 19 -     21056 TGGTT-----T---------------------------TTAAGTCA------------------A--AT-C-T-
i Uropsilus_gracilis.UroGra_scaffold_46687               I 5 C 0
s Ursus_maritimus.KK499267.1                                184582 20 +   5085361 tggtc-----t---------------------------ttaaacca------------------t--cttc-c-
i Ursus_maritimus.KK499267.1                             I 5 C 0
s Vicugna_pacos.KN270157.1                                   78784 20 +   5488506 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Vicugna_pacos.KN270157.1                               I 5 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                107953 20 -    112863 ttgtc-----t---------------------------ttaaatca------------------t--cttc-c-
i Vulpes_lagopus.VulLag_flattened_line_12041             I 5 C 0
s Xerus_inauris.XerIna_scaffold_2302                        177194 20 -    224448 TGGGC-----T---------------------------TCAAGCCC------------------T--CTTC-C-
i Xerus_inauris.XerIna_scaffold_2302                     I 5 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         31582 20 -     86975 tggtc-----t---------------------------ttaaacca------------------t--cttc-c-
i Zalophus_californianus.ZalCal_flattened_line_17732     I 5 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       3008 20 -     63895 TCATC-----T---------------------------TCCAGCCA------------------T--TTTG-T-
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 5 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639             223 20 +      3447 tggtc-----t---------------------------ttaagcca------------------t--cttc-c-
i Ziphius_cavirostris.ZipCav_flattened_line_334639       I 5 C 0
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Antilocapra_americana.AntAmePen_scaffold_21030             52491 474 -     68529 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9565 28 +     36723 GGTCAGTAGGATCTAT------T-CCAGAATT-ACA
s Acinonyx_jubatus.LLWD01001279.1                           815829 23 +   1699592 agcAGTTAAG-----G------T-TTAAAAGT-GCA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 252
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418146 22 +  29979442 agcAATTCAG-----G------T-TTACAA-T-GCA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 436
s Ailurus_fulgens.LNAC01001112.1                            218141 23 +    347723 agcaactaag-----t------t-ttaaaatt-gcA
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 436
s Allactaga_bullata.AllBul_scaffold_20030                    20852 23 -     61208 AGCAAGTGAG-----A------T-CTAGAATT-TTA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 333
s Allenopithecus_nigroviridis.k141_3755588                   50517 28 +     53615 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2544 28 +     13857 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19099 28 -     21945 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20784 28 +     32033 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74040 28 -     84148 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46278 28 -     78289 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45705 28 +     55831 GGTCAGTAGGAGGTAT------T-CCAGAATT-ACA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44168 28 -     64179 GATCAGCAGGAGCTAT------T-CCAGAATT-ACA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1276 28 -      3959 GATCAGCAGGAGCTAT------T-CCAGAATT-ACA
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42793 28 +     45454 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48442 28 +     70886 GATCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10615 28 +     30854 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34749 28 +     42133 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1591240 23 +   2318259 agAAATTAAG-----T------T-CTAGAATT-GCA
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 545
s Anoura_caudifer.AnoCau_scaffold_1412                      179268 23 -    412891 aacaattaaa-----t------t-ttagaatt-gca
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 922
s Aotus_azarae.k141_887050                                    2983 28 +     17741 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3608 28 -     15923 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673890 28 +   5030052 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3884 28 -     16391 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3443 28 -     17186 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      26622 23 -     32367 ACCAATTGAG-----T------T-TTAGAACC-ATA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 415
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  7784 23 -     15198 agtaattaaa-----t------t-ttagaatt-GCA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 920
s Ateles_geoffroyi_b.tarseq_1536                               276505 28 +  21539123 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12671 28 +     48076 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7806 28 -     28759 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35362 28 +     44353 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50731 28 -     71267 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24789 28 -     33135 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966000 23 -  23207421 cgcaattaag-----t------t-ctagaatt-gca
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 446
s Balaenoptera_bonaerensis.DF411050.1                         2500 23 -     25979 cgcaattaag-----t------t-ctagaatt-gca
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 447
s Beatragus_hunteri.BeaHun_scaffold_7278                     92238 23 +    124022 agaaattaag-----t------t-ctagaatt-gca
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 536
s Bison_bison.KN261452.1                                     35467 23 +    288883 AGAAATTAAG-----T------T-CTAGAATT-GCA
i Bison_bison.KN261452.1                                 C 0 I 505
s Bos_indicus.CM003047.1                                  28422607 23 -  48749331 AGAAATTAAG-----T------T-CTAGAATT-GCA
i Bos_indicus.CM003047.1                                 C 0 I 505
s Bos_mutus.JH880303.1                                      768208 23 +   1948126 AGAAATTAAG-----T------T-CTAGAATT-GCA
i Bos_mutus.JH880303.1                                   C 0 I 505
s Bos_taurus.CM000203.6                                   27558753 23 -  45695690 AGAAATTAAG-----T------T-CTAGAATT-GCA
i Bos_taurus.CM000203.6                                  C 0 I 505
s Bubalus_bubalis.KI419123.1                               1535434 23 -   4408762 agaaattaag-----t------t-ctagaatt-gca
i Bubalus_bubalis.KI419123.1                             C 0 I 505
s Cacajao_ayresi.k141_96119                                   9596 28 +     28062 GGTGAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44890 28 -     91139 GGTGAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22416 28 +     95584 GGTGAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22329 28 +    119600 GGTGAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            11981 28 +     18648 GGTCAGCAGGAGCTCT------T-CCAGAACC-GCA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11489 28 -     13885 GGTCAGTAGGAGCTAT------T-CCAGAAtt-gca
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3583 28 -      8861 GGTCAGCAGGAGCTCT------T-CCAGAATT-GCA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165455976 28 + 189096842 GGTCAGCAGGAGCTCT------T-CCAGAATT-GCA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3497 28 +      8664 GGTCAGCAGGAGCTCT------T-CCAGAATT-GCA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7633423 23 +  17673402 agcaattaag-----t------t-ctacaatt-gca
i Camelus_bactrianus.KN276810.1                          C 0 I 433
s Camelus_dromedarius.KN272107.1                           4667724 23 +   7040546 agcaattaag-----t------t-ctacaatt-gca
i Camelus_dromedarius.KN272107.1                         C 0 I 433
s Camelus_ferus.KB017975.1                                 1211412 23 +   1652518 agcaattaag-----t------t-ctacaatt-gca
i Camelus_ferus.KB017975.1                               C 0 I 433
s CanFam4.chr16                                           42508111 23 +  60362399 AGCAACTAAT-----A------T-TTAAAATT-TCA
i CanFam4.chr16                                          C 0 I 414
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    11747 23 -     23171 AGCAACTAAT-----A------T-TTAAAATT-TCA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 414
s Canis_lupus_dingo.QKWQ01000480.1                          225088 23 +   9314153 Agcaactaat-----a------t-ttaaaatt-tca
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 414
s Canis_lupus_familiaris.chr16                            41618225 23 +  59632846 Agcaactaat-----a------t-ttaaaatt-tca
i Canis_lupus_familiaris.chr16                           C 0 I 414
s Canis_lupus_orion.HG994398.1                            45109806 23 -  63665305 Agcaactaat-----a------t-ttaaaatt-tca
i Canis_lupus_orion.HG994398.1                           C 0 I 414
s Capra_aegagrus.CM003241.1                               27415242 23 -  46296322 agaaattaag-----t------t-ctagaatt-gca
i Capra_aegagrus.CM003241.1                              C 0 I 546
s Capra_hircus.CM004588.1                                 26597239 23 +  44709034 agaaattaag-----t------t-ctagaatt-gca
i Capra_hircus.CM004588.1                                C 0 I 546
s Capromys_pilorides.CapPil_scaffold_26391                    1198 23 -     20114 AGCAGCTGAG-----C------T-CTATGAAT-CCA
i Capromys_pilorides.CapPil_scaffold_26391               C 0 I 519
s Carlito_syrichta.NW_007259797.1                           273550 23 +    496798 GGCAATCAAG-----G------T-CTAGAATT-ACA
i Carlito_syrichta.NW_007259797.1                        C 0 I 443
s Carollia_perspicillata.CarPer_scaffold_107871               2660 23 +      9923 aacagttaaa-----t------t-ttagaatt-gca
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 918
s Castor_canadensis.CasCan_scaffold_39952                    30482 12 -     39886 ----------------------T-CTAGAATT-GCA
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 808
s Catagonus_wagneri.CatWag_scaffold_2839                     82344 23 -    217609 agaaattaag-----t------t-ctataatt-gca
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 434
s Cavia_aperea.AVPZ01000300.1                              4999278 23 +  23392119 AGCAATTGAG-----T------T-CTAGGAAT-CCA
i Cavia_aperea.AVPZ01000300.1                            C 0 I 427
s Cavia_porcellus.DS562891.1                               5002719 23 +  23407841 AGCAATTGAG-----T------T-CTAGGAAT-CCA
i Cavia_porcellus.DS562891.1                             C 0 I 427
s Cavia_tschudii.CavTsc_scaffold_23560                       65796 23 -     66877 AGCAATTGAG-----T------T-CTAGGAAT-CCA
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 427
s Cebuella_niveiventris.k141_592277                           6897 28 -     12580 GGTCAGCAGGAGCTCT------T-CCAGAATT-GCA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44955 28 +     53515 GGTCAGCAGGAGCTCT------T-CCAGAATT-GCA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  375696 28 -  26074798 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9765 28 -     34880 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68861 28 -     89041 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         1197 23 -     76265 GGCAATCAAG-----G------T-CTAGAATT-ACA
i Cephalopachus_bancanus.k141_1140705                    C 0 I 459
s Ceratotherium_simum.JH767749.1                          15494667 23 -  27778364 agcaattatg-----t------t-tcagaatt-cca
i Ceratotherium_simum.JH767749.1                         C 0 I 441
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          21500 23 +     27315 agcaattatg-----t------t-tcagaatt-cca
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 441
s Cercocebus_atys.KQ010504.1                                143600 28 -   4669795 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47339 28 +     47900 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2772 28 -     14410 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47154 28 -    148725 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29432 28 -     40656 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9391 28 +     20796 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14505 28 -     17524 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30237 28 -     34525 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14017 28 -     25376 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366604 28 -  39242232 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272331 28 +  21565898 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34696 28 -     45857 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29597 28 -     32606 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5760 28 +      8499 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28159 28 +     70610 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25119 28 +     36323 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15173 23 -     19938 agcaatgaag-----t------t-ctCGAACT-TCA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 81
s Cheracebus_lucifer.k141_2312002                            10690 28 -     32913 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21103 28 -     40346 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21358 28 +    216457 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21147 28 +     39636 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1242176 23 -   2543920 AGCAATTGAG-----T------T-CTAGGAAT-CCA
i Chinchilla_lanigera.JH722012.1                         C 0 N 0
s Chiropotes_albinasus.k141_1091259                          33133 27 -     52013 GGTCAGTAGGA-CTAT------T-CCAGAAtt-gca
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44230 28 -    112038 GGTGAGTAGGAGCTAT------T-CCAGAATT-ACA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9781 28 +     34062 GGTGAGTAGGAGCTAT------T-CCAGAATT-ACA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346019 28 +  18827391 GGTCAATAGGAGCTAT------T-CCAGAATT-ACA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12558 28 -     44032 GGTCAATAGGCGCTAT------T-CCAGAATT-ACA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307405 28 - 135778131 CGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 1843 23 +     10270 AGCAATTAAA-----G------T-CTAGAATT-TCT
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 I 90
s Choloepus_hoffmanni.KN194906.1                            609323 23 -    839153 agcaattaaa-----g------t-ctagaatt-tct
i Choloepus_hoffmanni.KN194906.1                         C 0 I 87
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               1889 12 -      4087 agcttagtgg-----t------t-------------
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 I 278
s Colobus_angolensis.KN981557.1                             411818 28 -   2368649 GGTCAGTAGAAGCTAT------G-CCAGAATT-ACA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381700 28 - 200372422 GGTCAGTAGAAGCTAT------T-CCAGAATT-ACA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5252 28 -     84244 GGTCAGTAGAAGCTAT------T-CCAGAATT-ACA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35809864 21 +  53390261 AGCAGTTAAG-----T------T-CTAGAGTT-G--
i Condylura_cristata.JH655891.1                          C 0 I 451
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          5425 23 -      8242 agtacttaaa-----t------t-ttaaaatt-cca
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 435
s Cricetomys_gambianus.CriGam_scaffold_14425                 47086 21 -     83289 AGCAACCCAG-----T------T-CTAGAATT-G--
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 226
s Cricetulus_griseus.LT883664.1                          213118619 21 - 224834208 AGCAATTGAA-----T------T-CTGGGATC-A--
i Cricetulus_griseus.LT883664.1                          C 0 I 205
s Crocidura_indochinensis.CroInd_scaffold_77846              11734 23 +     12657 AATCAGTTAA-----T------T-ATAGAATT-GAT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 394
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7040 23 +     87169 agcAATTAAG-----G------T-TTAAAATT-GCA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 424
s Ctenodactylus_gundi.CteGun_scaffold_65                    649326 23 -   1526836 AGAAATTGGG-----C------T-GTAGAAAT-GCT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 432
s Ctenomys_sociabilis.CteSoc_scaffold_65050                   1208 22 -     25294 -GCAGCTGAG-----A------T-CTAGAAAT-CCA
i Ctenomys_sociabilis.CteSoc_scaffold_65050              I 18 n 352
s Cuniculus_paca.CunPac_flattened_line_7025                  10473 23 +     36344 AGCAATTGGG-----T------T-CTAGGAAT-CTA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 426
s Dasyprocta_punctata.DasPun_flattened_line_15900            30894 23 +     75252 AGCAATTGAG-----T------T-CTAGGAAT-CCA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 423
s Dasypus_novemcinctus.JH564415.1                          2112531 23 -   2246927 GGCAATTGAG-----T------G-CTAGAATT-TCA
i Dasypus_novemcinctus.JH564415.1                        C 0 I 81
s Delphinapterus_leucas.KZ290073.1                        18634406 23 -  35494412 agcaattaag-----t------t-ctagaatt-GCC
i Delphinapterus_leucas.KZ290073.1                       C 0 I 444
s Desmodus_rotundus.KZ672289.1                            11867647 23 -  20541912 agcaattaaa-----t------t-ttagaatt-gca
i Desmodus_rotundus.KZ672289.1                           C 0 I 922
s Dicerorhinus_sumatrensis.PEKH010002091.1                  666941 23 -   1390856 agcaattatg-----t------t-tcagaatt-gca
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 442
s Diceros_bicornis.DicBicMic_scaffold_5955                  141739 23 -    198055 agcaattatg-----t------t-tcagaatt-gca
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 442
s Dinomys_branickii.DinBra_scaffold_10381                   102257 23 -    115145 AGCAACTGAG-----T------T-CTAGGAAT-CCA
i Dinomys_branickii.DinBra_scaffold_10381                C 0 N 0
s Dipodomys_ordii.KN672350.1                              18953848 23 -  37912305 AGTGATTAAG-----T------T-ACTGAATT-TCA
i Dipodomys_ordii.KN672350.1                             C 0 I 864
s Dipodomys_stephensi.DipSte_scaffold_89095                   8756 23 -     10735 AGTAATTAAG-----T------T-ACTGAATT-TCA
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 I 870
s Dolichotis_patagonum.DolPat_scaffold_80628                 12025 23 +     14636 AGCAATTGAG-----T------T-CTAGGAAT-CCA
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 423
s Echinops_telfairi.JH980293.1                            62858191 23 - 111700974 ACCAGTTCAA-----T------C-CTAGAATT-GCA
i Echinops_telfairi.JH980293.1                           C 0 I 80
s Eidolon_helvum.AWHC01266696.1                               8778 23 +     19438 agcaattaaa-----t------t-ttagaatt-gct
i Eidolon_helvum.AWHC01266696.1                          C 0 I 444
s Elaphurus_davidianus.JRFZ01104969.1                       245044 23 -    607251 agaaattaag-----t------t-ctagaatt-gca
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 525
s Elephantulus_edwardii.JH947257.1                         9113256 23 -  10337057 AGACATTACA-----A------T-AGAGAATT-TCT
i Elephantulus_edwardii.JH947257.1                       C 0 I 68
s Ellobius_lutescens.LOEQ01008920.1                          34799 21 +    110024 AGCATCTGAA-----C------G-CTAGgatt-a--
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 225
s Ellobius_talpinus.LOJH01026522.1                           16727 21 +     18970 AGCATCTGAA-----C------T-CTAGgatt-a--
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 226
s Enhydra_lutris.KZ291758.1                               24924639 23 +  41312741 agcaactgaa-----g------t-ttaaaatt-gca
i Enhydra_lutris.KZ291758.1                              C 0 I 436
s Eptesicus_fuscus.JH977646.1                             12581297 18 +  14770903 agcAGTTAAG-----T------T-TTAG------TA
i Eptesicus_fuscus.JH977646.1                            C 0 I 1113
s Equus_asinus.JREZ01000139.1                              3043881 23 -   4378816 agcAATTAAG-----T------T-TTAGAATC-GTG
i Equus_asinus.JREZ01000139.1                            C 0 I 966
s Equus_caballus.CM000403.2                               21377815 23 +  39960074 agcAATTAAG-----T------T-TTAGAATC-GTG
i Equus_caballus.CM000403.2                              C 0 I 962
s Equus_przewalskii.KK951119.1                              413797 23 -    498745 agcAATTAAG-----T------T-TTAGAATC-GTG
i Equus_przewalskii.KK951119.1                           C 0 I 962
s Erinaceus_europaeus.JH835339.1                           3670490 23 +   7059049 AAAAATTAAG-----T------T-CTAGAATT-GTG
i Erinaceus_europaeus.JH835339.1                         C 0 I 594
s Erythrocebus_patas.Contig38                               265547 28 +  21539334 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           73615 23 -    133382 cgcaattaag-----t------t-ctagaatt-gca
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 446
s Eubalaena_japonica.EubJap_flattened_line_57114              1328 23 +     25849 cgcaattaag-----t------t-ctagaatt-gca
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 I 447
s Felis_catus.CM001381.2                                 186249832 23 - 206538554 agcAGTTAAG-----G------T-TTAAAAGT-GCA
i Felis_catus.CM001381.2                                 C 0 I 252
s Felis_catus_fca126.CM031415.1                          185119788 23 - 205367284 agcAGTTAAG-----G------T-TTAAAAGT-GCA
i Felis_catus_fca126.CM031415.1                          C 0 I 252
s Felis_nigripes.FelNig_flattened_line_44075                   430 23 +     25330 agcAGTTAAG-----G------T-TTAAAAGT-GCA
i Felis_nigripes.FelNig_flattened_line_44075             C 0 I 252
s Fukomys_damarensis.KN121974.1                            2925252 23 -   3816255 AGCAATTGAG-----T------T-CCAGGAAT-CCA
i Fukomys_damarensis.KN121974.1                          C 0 I 428
s Galeopterus_variegatus.GalVar_scaffold_51812                4198 23 -     28519 agcaataaag-----t------t-ctaggatt-gaa
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 I 448
s Giraffa_tippelskirchi.LVKQ01S007888.1                       1200 23 +    660261 agaaataaag-----t------t-ctagaatt-gca
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 632
s Glis_glis.GliGli_scaffold_163929                            4060 13 -      6791 AGCAGTTGAG-----T------T-C-----------
i Glis_glis.GliGli_scaffold_163929                       C 0 I 661
s Gorilla_beringei.k141_935316                                 646 28 +     34797 GGTCAGTAGGATCTAT------T-CCAGAATT-ACA
i Gorilla_beringei.k141_935316                           I 21 I 8
s Gorilla_gorilla.LT578341.1                                258737 28 - 186649187 GGTCAGTAGGATCTAT------T-CCAGAATT-ACA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    5898 13 -     78134 agcaattgag-----t------t-c-----------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 698
s Helogale_parvula.HelPar_flattened_line_2585                33444 23 -    327341 agcAATTAAG-----G------T-TTAAAATT-GCA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 424
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14966 23 +     48891 agaaattaag-----t------t-ctagaatt-gca
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 533
s Heterocephalus_glaber.JH602082.1                         1937697 18 -  22651954 -----TTGAG-----T------T-CTAGGAAT-CCA
i Heterocephalus_glaber.JH602082.1                       C 0 I 429
s Heterohyrax_brucei.HetBruBak_scaffold_116546                5940 23 +      8654 agcaattaaa-----t------t-ccagaatt-tca
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 I 82
s Hippopotamus_amphibius.HipAmp_scaffold_38803               10443 23 -     36432 agcaattaag-----t------t-ctagaact-gca
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 444
s Hipposideros_armiger.JXIK01000431.1                      1555468 23 -   1711038 agcaattaca-----t------t-ttagaatt-gca
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 463
s Hipposideros_galeritus.HipGal_scaffold_245053               1285 23 -      1435 agcaattata-----t------t-ttagaatt-gca
i Hipposideros_galeritus.HipGal_scaffold_245053          C 0 N 0
s Hoolock_leuconedys.ctg274                                    145210 28 -    630532 GGTCAATAGGAGCTAT------T-CCAGTATT-ACA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73084 23 +     83186 agcAATTAAG-----G------T-TTAAAATT-ACA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 416
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            74627 23 +    143317 AGCAACTGAG-----T------T-CTAGGAAT-CCA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 428
s Hylobates_agilis.k141_1155965                               8256 28 +     12352 GGCCAATAGGAGCTAT------T-CCAGTATT-ACA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15443 28 +     55766 GGCCAATAGGAGCTAT------T-CCAGTATT-ACA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054971 28 + 191637585 GGTCAATAGGAGCTAT------T-CCAGTATT-ACA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803849 28 +  11177569 GGTCAATAGGAGCTAT------T-CCAGTATT-ACA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      10426 23 -    135385 agcaattgag-----t------t-cttggaat-cca
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 476
s Ictidomys_tridecemlineatus.JH393364.1                     389749 10 +   7955117 AGCAACAGAG--------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 415
s Inia_geoffrensis.IniGeo_flattened_line_69447               12510 23 -     16823 aacaattaag-----t------t-ctagaact-gta
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 444
s Jaculus_jaculus.JH725527.1                               1242401 23 +   9596543 AGCAAGTGAG-----T------T-CTAGAATT-GTG
i Jaculus_jaculus.JH725527.1                             C 0 I 337
s Kogia_breviceps.KogBre_flattened_line_3970                 74350 23 -     97402 agcaattaag-----t------t-ctagaatt-gca
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 444
s Lagothrix_lagothricha.k141_246028                          45056 28 +    110728 GGTCAGTAGAAGCTAT------T-CCAGAATT-ACA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    34848 23 -     49555 AGCAGTTAAG-----T------T-TTAGAATT-GTA
i Lasiurus_borealis.LasBor_scaffold_26245                I 823 I 974
s Leontocebus_fuscicollis.k141_3470480                         538 27 -     23187 GGTCAGTAGGA-CTAT------T-CCAGAAtt-gca
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            851 27 -     14280 GGTCAGTAGGA-CTAT------T-CCAGAAtt-gca
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         494 27 +      3713 GGTCAGTAGGA-CTAT------T-CCAGAAtt-gca
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      684 28 +      8855 GGTCAGTAGGAGCTAT------T-CCAGAAtt-gca
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5486 28 -     13645 GGTCAGTAGGAGCTAT------T-CCAGAAtt-gca
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        815944 23 -   3914936 agcAATTAAG-----A------T-TTAAAATT-GCA
i Leptonychotes_weddellii.KB714746.1                     C 0 I 431
s Lepus_americanus.LepAme_scaffold_56121                     21027 16 +     24238 AGCAATTAAG------------C-------TT-GCT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 566
s Lipotes_vexillifer.KE559953.1                             343695 23 +    662738 agcatttaag-----t------t-ctagaatt-gca
i Lipotes_vexillifer.KE559953.1                          C 0 I 441
s Lophocebus_aterrimus.ctg367                               336482 28 -   1826925 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39087674 23 +  43346337 agcaattaag-----c------t-ctagaatt-tca
i Loxodonta_africana.GL010049.1                          C 0 I 84
s Lycaon_pictus.CM007581.1                                41617380 23 +  59628241 agcaattaat-----a------t-ttaaaatt-tca
i Lycaon_pictus.CM007581.1                               C 0 I 414
s Macaca_arctoides.k141_1757516                              47874 28 -     61512 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375536 28 -  60120075 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27804 28 +     30207 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2642 28 -      5035 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27757 28 +     30527 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38933 28 -     50087 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48678 28 +     51645 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417880 28 - 187317192 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402111 28 +  25927173 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51282 28 -     62418 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3813 28 +     14901 GGTTAGTAGGAGCTAT------T-CCAGAATT-ACA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47755 28 +     59329 GGTCAGTAGGAGCTAT------T-GCAGAATT-ACA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273662 28 +    668171 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2294 28 -      5049 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5460 28 +     17132 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                225713 23 -    270270 AGCAATTAAA-----T------T-TTAGAATT-GCT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 442
s Mandrillus_leucophaeus.scaffold280                        324950 28 +  24302211 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359781 28 -    752769 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             675992 23 -    737560 agcAGTTAAG-----T------T-TTGGAATG-Gca
i Manis_javanica.JSZB01003497.1                          C 0 I 442
s Manis_pentadactyla.KN006162.1                             223292 23 +    317179 agcAGTTAAG-----T------T-TTGGAATG-Aca
i Manis_pentadactyla.KN006162.1                          C 0 I 439
s Marmota_marmota.CZRN01000018.1                           7503994 10 +  40650429 AGCAACAGAG--------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 412
s Megaderma_lyra.MegLyr_scaffold_4542                       153031 23 +    207569 agcaattaaa-----t------t-ttagagtt-gca
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 526
s Mellivora_capensis.MelCap_flattened_line_19308             28704 23 -     74585 agcAACTAAG-----T------T-TTAAAATT-GCA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 432
s Mesocricetus_auratus.KB708134.1                         17432468 21 +  29670104 AGCAATTGAA-----T------T-CTGGAGTC-A--
i Mesocricetus_auratus.KB708134.1                        C 0 I 197
s Mesoplodon_bidens.MesBid_scaffold_6114                     89979 23 +     93471 agcaattaag-----t------t-ctagaatt-gca
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 441
s Mico_argentatus.k141_582562                                12080 28 +     17804 GGTCAGCAGGAGCTCT------T-CCAGAATC-GCA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12580 28 -     12984 GGTCAGCAGGAGCTCT------T-CCAGAATC-GCA
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20899 28 -     26561 GGTCAGCAGGAGCTCT------T-CCAGAATC-GCA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49373 23 +    145209 AATGATTCAA-----T------T-CTAGAATT-GCA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 73
s Micronycteris_hirsuta.MicHir_scaffold_2233                187438 23 +    200668 agcaattaaa-----t------t-ttagaatt-gca
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 712
s Microtus_ochrogaster.CM001695.1                         15966213 21 +  27267610 AGCATCTCAA-----C------T-CTAggatt-a--
i Microtus_ochrogaster.CM001695.1                        C 0 I 226
s Miniopterus_natalensis.LDJU01000034.1                    6366866 23 -   8254450 agcagttacg-----t------t-ttagaatt-GCA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1115
s Miniopterus_schreibersii.MinSch_scaffold_23309             44588 23 -     48117 agcagttaca-----t------t-ttagaatt-GCA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 1124
s Miopithecus_ogouensis.k141_1534655                         25048 28 -     27822 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11175 23 +     27589 agcAATTAAG-----A------T-TTAAAATT-GCA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 430
s Monodon_monoceros.MonMon_M_scaffold_103                   362083 23 +    437263 agcaattaag-----t------t-ctagaatt-GCC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 445
s Mormoops_blainvillei.MorMeg_scaffold_1417                 181656 23 +    366855 agcaattcaa-----t------t-ttagaatt-gca
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 910
s Moschus_moschiferus.MosMos_scaffold_13123                  31197 23 -     82753 AGAAATTACG-----T------T-CGAGAATT-GCA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 533
s Mungos_mungo.MunMun_flattened_line_18455                   21193 23 -     63510 agcAATTAAG-----G------T-TCAAAATT-GCA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 424
s Murina_feae.MurFea_scaffold_17764                          43849 23 +     47283 AGCAGTTAAG-----T------T-TTAGAATT-GCA
i Murina_feae.MurFea_scaffold_17764                      I 243 I 1106
s Mus_caroli.LT608237.1                                   35597394 21 + 120012414 AGAAACTGAA-----T------T-CTGGTGCT-A--
i Mus_caroli.LT608237.1                                  I 6 I 239
s Mus_musculus.chr8                                       41690938 21 + 129401213 agaaactgaA-----T------T-CTGATGTT-A--
i Mus_musculus.chr8                                      C 0 I 235
s Mus_pahari.LT608297.1                                   58218898 21 +  89631738 agaaACTGAA-----T------T-CTGGTGCT-A--
i Mus_pahari.LT608297.1                                  C 0 I 237
s Mus_spretus.CM004101.1                                  39499858 21 + 130317789 agaaactgaA-----T------T-CTGGTGTT-A--
i Mus_spretus.CM004101.1                                 C 0 I 234
s Mustela_putorius.JH418006.1                             14357564 23 +  14710649 agcAACTGTG-----G------T-TTAAAATT-GCA
i Mustela_putorius.JH418006.1                            C 0 I 436
s Myocastor_coypus.MyoCoy_scaffold_15261                     67149 23 +     67721 AGCAGCTGAG-----C------T-TCAGGAAT-CCA
i Myocastor_coypus.MyoCoy_scaffold_15261                 C 0 N 0
s Myotis_brandtii.KE162005.1                               9795865 23 +  10118263 ggcagttaag-----t------t-ttagaatt-gca
i Myotis_brandtii.KE162005.1                             C 0 I 1098
s Myotis_davidii.KB100139.1                                4390036 23 +   6019432 ggcAGTTAAG-----T------T-TCAGAATT-GCA
i Myotis_davidii.KB100139.1                              C 0 I 1102
s Myotis_lucifugus.GL429869.1                               386067 23 +   4330536 agcagttaag-----t------t-ttagaatt-gca
i Myotis_lucifugus.GL429869.1                            C 0 I 1109
s Myotis_myotis.MyoMyo_scaffold_66571                         4853 23 +     18357 GGCAGTTAAG-----T------T-TTAGAATT-GCA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 1110
s Nannospalax_galili.KL204047.1                             949020 23 +   3037898 agcagctgag-----t------t-ctagaatt-gta
i Nannospalax_galili.KL204047.1                          C 0 I 1021
s Nasalis_larvatus.k141_1350636                              31827 28 +     34575 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11468623 23 -  31847680 AGCAATTAAG-----A------T-TTAAAATT-GCA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 431
s Neophocaena_asiaeorientalis.KZ687982.1                   1234749 23 -   7148211 agcaattaag-----t------t-ctagaatt-GCC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 445
s Noctilio_leporinus.NocLep_scaffold_7894                   130259 23 -    149072 agcaatgaaa-----t------t-ttaggatt-gca
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 641
s Nomascus_annamensis.k141_1771965                           56144 28 -    132029 GGTCAGTAGGAGCTAT------T-CCAGTATT-ACA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12239 28 -     16345 GGTCAATAGGAGCTAT------T-CCAGTATT-ACA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18128 28 +     22201 GGTCAATAGGAGCTAT------T-CCAGTATT-ACA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416358 28 -  22158432 GGTCAATAGGAGCTAT------T-CCAGTATT-ACA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28533 28 -     54323 GGTCAATAGGAGCTAT------T-CCAGTATT-ACA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201080 23 +   9404916 agcgattaat-----a------t-ttaaaatt-tca
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 416
s Octodon_degus.JH651603.1                                11058676 23 -  11899542 AACAGCTGAG-----C------T-CTAGGAAT-GTA
i Octodon_degus.JH651603.1                               C 0 I 369
s Odobenus_rosmarus.KB229312.1                             1454391 23 +   2017862 agcAATTAAG-----A------T-TTAAAATT-GCA
i Odobenus_rosmarus.KB229312.1                           C 0 I 434
s Odocoileus_virginianus.KZ100018.1                         441583 23 -    630418 agaaattaag-----t------t-ctagaatt-gca
i Odocoileus_virginianus.KZ100018.1                      C 0 I 540
s Okapia_johnstoni.LVCL01S0005463.1                          21139 23 +    150152 agaaataaag-----t------t-ctagaatt-gca
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 644
s Ondatra_zibethicus.OndZib_scaffold_7387                    96832 21 -    140218 AGCATCTGAA-----T------T-CTAGGATT-A--
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 224
s Onychomys_torridus.OnyTor_scaffold_28377                    7405 21 -     41509 AGCAACTGAA-----C------T-CTGGAATT-A--
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 189
s Orcinus_orca.KB316932.1                                  8105153 23 +  10937097 agcttttttt-----t------t-ctagaatt-gca
i Orcinus_orca.KB316932.1                                C 0 I 445
s Orycteropus_afer.OryAfe_flattened_line_201229               2566 23 +     11607 agcaatgaag-----t------t-ctagattt-tCA
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 I 223
s Oryctolagus_cuniculus.CM000791.1                       107107686 23 - 174332312 AGCAATTAAG-----TTCTAGAC-------TT-GTT
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 561
s Otocyon_megalotis.JAEUCK010005147.1                        42038 23 +    559221 agcaattaat-----a------t-ttaaaatt-tca
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 416
s Ovis_aries.CM001607.2                                   26409992 23 -  44047080 agaaattaag-----t------t-ctagaatt-gca
i Ovis_aries.CM001607.2                                  C 0 I 533
s Ovis_canadensis.OviCan_scaffold_67953                      10615 23 +     17875 agaaattaag-----t------t-ctagaatt-gca
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 533
s Pan_paniscus.AJFE02004363.1                                  134 28 +      1263 GGTCAGTAGGATCTAT------T-CCAGAATT-ACA
i Pan_paniscus.AJFE02004363.1                            I 65 I 8
s Pan_troglodytes.NBAG03003091.1                             16513 29 -     26668 GGTCAGTAGGATCTAT------T-CCAGAATTTACA
i Pan_troglodytes.NBAG03003091.1                         I 131 I 144
s Panthera_onca.PanOnc_flattened_line_3271                   27834 23 -    230217 agcAGTTAAG-----G------T-TTAAAAGT-GCA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 252
s Panthera_pardus.KV860321.1                              18465066 23 -  18783137 agcAGTTAAG-----G------T-TTAAAAGT-GCA
i Panthera_pardus.KV860321.1                             C 0 I 252
s Panthera_tigris.KE722367.1                               3975667 23 +   8748460 agcAGTTAAG-----A------T-TTAAAAGT-GCA
i Panthera_tigris.KE722367.1                             C 0 I 252
s Pantholops_hodgsonii.KE114653.1                          1621510 23 +   2937107 agaaattaag-----t------t-ctagaatt-gca
i Pantholops_hodgsonii.KE114653.1                        C 0 I 533
s Papio_anubis.CM001495.2                                   245959 28 - 183742232 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12244 28 +     21308 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  294987 28 -  20919399 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24884 28 -     27687 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1563 28 +     10553 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1523 28 -     10386 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     17844 23 +     78924 agcAATTAAG-----T------T-TTCAAATT-GCA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 414
s Perognathus_longimembris.PerPac_flattened_line_89005        6022 23 +      9367 AGTGATTAAG-----T------T-CCTGAATT-TCA
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 906
s Peromyscus_maniculatus.KI615324.1                         250619 21 +  18517816 AGCAACTGAA-----C------T-CTGAAATG-A--
i Peromyscus_maniculatus.KI615324.1                      C 0 I 195
s Petromus_typicus.PetTyp_scaffold_17301                     34799 23 -     56120 AGCAATTGAG-----T------T-TTAGGAAT-CCA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 338
s Phocoena_phocoena.PhoPho_flattened_line_24159               6677 23 -     63832 agcaattaag-----t------t-ctagaatt-GCC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 443
s Piliocolobus_badius.k141_2704958                            5205 28 +     55023 GGTCAGTAGGAACTAT------T-CCAGAATT-ACA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4727 28 -     89929 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5317 28 +     40849 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257047 28 +  14605196 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             6421 23 +     22231 AGCAGTTAAG-----T------T-TTAGAATT-GTA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 1092
s Pithecia_albicans.k141_1239476                             66586 28 +    207309 GGTGAGTAGGAGCTAT------T-CCAGAATT-ACA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7674 28 -     25401 GGTGAGTAGGAGCTAT------T-CCAGAATT-ACA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33422 28 +     58159 GGTGAGTAGGAGCTAT------T-CCAGAATT-ACA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33698 28 +     63561 GGTGAGTAGGAGCTAT------T-CCAGAATT-ACA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33458 28 +     51148 GGTGAGTAGGAGCTAT------T-CCAGAATT-ACA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558428 28 -   4542175 GGTGAGTAGGAGCTAT------T-CCAGAATT-ACA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33442 28 +     51125 GGTGAGTAGGAGCTAT------T-CCAGAATT-ACA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            3698 23 +     19503 agcaattaat-----t------t-ctagaatt-gca
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 443
s Plecturocebus_bernhardi.k141_2549090                        9859 28 +     39866 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4941 28 -      9282 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44345 28 -     87950 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44739 28 -     88961 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9437 28 -     39403 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44388 28 +     87928 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9436 28 -     60166 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16357 28 -     67232 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44289 28 -     90634 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45756 28 +     89403 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181900 28 - 189387572 GGTCAGTAGGATCTAT------T-CCAGAATT-ACA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196643 28 -   9816681 GGTCAGTAGGATCTAT------T-CCAGAATT-ACA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30407 28 +     69807 GGTCAGTAGGAGCTAT------T-TCAGAATT-ACA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47588 28 -     80239 GGTCAGTAGGAGCTAT------T-TCAGAATT-ACA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2472 23 -     12774 agcaattaaa-----t------t-ccagaatt-tca
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 I 82
s Pteronotus_parnellii.KE847780.1                            54572 23 -     66298 agcaattaaa-----t------t-ttagactt-gca
i Pteronotus_parnellii.KE847780.1                        C 0 I 662
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7156 23 -     18639 agcAACTGAG-----G------T-TTAAAATT-GCA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 436
s Pteropus_alecto.KB030862.1                               5843322 23 -  28871421 agcaattaaa-----t------t-ttagaatt-gct
i Pteropus_alecto.KB030862.1                             C 0 I 452
s Pteropus_vampyrus.KN525825.1                             3539838 23 -   4952924 Agcaattaaa-----t------t-ttagaatt-gct
i Pteropus_vampyrus.KN525825.1                           C 0 I 452
s Puma_concolor.QAVW01001104.1                            18102055 23 +  38429054 agcAGTTAAG-----G------T-TTAAAAGT-GCA
i Puma_concolor.QAVW01001104.1                           C 0 I 252
s Pygathrix_cinerea.k141_1153803                             29774 28 +     91421 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156326 28 -   7812017 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10626 28 +     72585 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4104 23 -     55207 agaaattaag-----t------t-ctagaatt-gca
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 540
s Rattus_norvegicus.chr16                                 37025528 21 -  90668790 AGCAACTGAA-----T------T-CTGGAATT-A--
i Rattus_norvegicus.chr16                                C 0 I 227
s Rhinolophus_sinicus.LVEH01000134.1                       2917253 24 +   3329780 agcaattaaa-----t------ttttagaatt-gca
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 446
s Rhinopithecus_bieti.k119_778604                             4236 25 +      7119 GGTCAGTAGGAGCTAT------T-CCagaatt----
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124906 25 + 195417433 GGTCAGTAGGAGCTAT------T-CCAGAATT----
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239078 25 -   7961872 GGTCAGTAGGAGCTAT------T-CCGGAATT----
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 77825 23 -    116970 AGCAATTAAA-----T------T-TTAGAATT-GTT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 443
s Saguinus_bicolor.k141_161125                                9029 27 +     12412 GGTCAGTAGGA-CTAT------T-CCAGAAtt-gca
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               490 27 +      9876 GGTCAGTAGGA-CTAT------T-CCAAAAtt-gca
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16093 27 -     24931 GGTCAGTAGGA-CTAT------T-CCAGAATC-GCA
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                                973 27 +      4564 GGTCAGTAGCA-CTAT------T-CCAGAATC-GCA
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3778 27 -      7443 GGTCAGTAGCA-CTAT------T-CCAGAATC-GCA
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394683 27 - 209938924 GGTCAGCAGGA-CTAT------T-TCAGAAtt-gca
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1393 27 +     10149 GGTCAGTAGGA-CTAT------T-CCAGAATC-GCA
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                733 27 +     10417 GGTCAGTAGGA-CTAT------T-CCAGAAtt-gca
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       13573 23 +     16473 agAAATTAAG-----T------T-CTAGAACT-GCA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 522
s Saimiri_boliviensis.NW_024100920.1                       1110856 28 + 121099817 GGTCAGTAGGAGCTAT------T-CTAGAATT-ACA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32423 28 -     47369 GGTCAGTAGGAGCTAT------T-CTAGAATT-ACA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32809 28 -     79414 GGTCAGTAGGAGCTAT------T-CTAGAATT-ACA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29500 28 -     34454 GGTCAGTAGGAGCTAT------T-CTAGAATT-ACA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16901 28 -     22428 GGTCAGTAGGAGCTAT------T-CTAGAATT-ACA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32055 28 -     47109 GGTCAGTAGGAGCTAT------T-CTAGAATT-ACA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240085 28 +   5703754 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9675 28 +     21866 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    118907 21 +    313613 AGCAGTTAAG-----T------T-CTAGAATT-G--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 3208
s Semnopithecus_entellus.k141_583282                          1213 28 +     11297 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31606 28 +     58920 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18104 28 -     45317 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25762 28 -     42441 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28438 28 -     29113 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31515 28 -     48123 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52395 21 +     77746 AGCAATTGAA-----T------T-CTGGAATT-A--
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 204
s Solenodon_paradoxus.SolPar_flattened_line_126            1866480 23 -   1910179 AAAAACTGAG-----T------T-CAAGAACT-GCA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 431
s Sorex_araneus.JH798187.1                                 4673710 23 +  18376816 aacaattaag-----t------t-tgaGAATT-GAA
i Sorex_araneus.JH798187.1                               C 0 I 417
s Spermophilus_dauricus.KZ294078.1                         1871316 10 +   3870691 AGCAACAGAG--------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 415
s Spilogale_gracilis.SpiGra_flattened_line_13525             15407 11 -     97271 agcAACTAAG-----G--------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 427
s Suricata_suricatta.SurSur_flattened_line_6629             128045 23 +    196729 agcAATTAAG-----G------T-TTAAAACT-GCA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 420
s Sus_scrofa.CM000828.4                                    6647282 23 +  69701581 agaaattaag-----t------t-ctagaatt-gca
i Sus_scrofa.CM000828.4                                  C 0 I 442
s Symphalangus_syndactylus.tarseq_199                       393615 28 +   1523678 GGTCAATAGGAGCTAT------T-CCAGTATT-ACA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                16755 23 +     22964 AACAGTTAAG-----T------T-TTAGAATT-GCA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 431
s Tapirus_indicus.TapInd_scaffold_7432                      194135 23 +    199430 agcAATTAAG-----T------T-TTAGAATC-GCA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 430
s Tapirus_terrestris.TapTer_scaffold_755                    108103 22 -    539355 agcAATTAAG-----T------T--TAGAATC-GCA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 443
s Tarsius_lariang.k141_1733899                                3739 23 +      9917 ggcaatcaag-----t------t-ctagaatt-aca
i Tarsius_lariang.k141_1733899                           C 0 I 445
s Tarsius_wallacei.k141_226975                               10535 23 +     20590 ggcaatcaag-----t------t-ctagaatt-aca
i Tarsius_wallacei.k141_226975                           C 0 I 445
s Theropithecus_gelada.CM009954.1                           355768 28 - 186847797 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27009 23 -     33621 AGCAATTGAG-----T------T-TTAGAAAT-CCA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 410
s Tolypeutes_matacus.TolMat_scaffold_31955                   22273 23 -     31044 agcAATTAAG-----T------T-GTAGAACG-TCA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 79
s Tonatia_saurophila.TonSau_scaffold_294                    482572 23 -    610378 agGAATTAAA-----T------T-TTAGAACT-GCA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 921
s Trachypithecus_auratus.k141_1189070                        23514 28 +     26378 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36313 28 -     78344 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22839 28 +     25722 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31269 28 -     62838 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31260 28 +     46913 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         11997 28 -     28527 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33204 28 -     64340 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31242 28 -     63452 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12689 28 +     22490 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          655 28 +      9911 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          450 28 -     33539 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258209 28 -   6242583 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4228 28 +     19340 GGTCAGTAGGAGCTAT------T-CCAGAATT-ACA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   176535 23 -    200418 aacAATTAAG-----C------T-TTAGAATT-GCA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 818
s Trichechus_manatus.JH594705.1                            6485278 23 -  10818551 AGCATTTAAA-----T------T-GTAGAATT-TCA
i Trichechus_manatus.JH594705.1                          C 0 I 82
s Tupaia_chinensis.KB320699.1                              1838673 23 -   4065304 agcaattaag-----t------t-ctaaaatt-gca
i Tupaia_chinensis.KB320699.1                            C 0 I 453
s Tupaia_tana.TupTan_flattened_line_394                      12766 23 -     70247 agcaattaag-----t------t-ctaaaatt-gca
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 452
s Tursiops_truncatus.MRVK01000835.1                       17368278 23 -  33153633 agcaattaaa-----t------t-ctagaatt-gca
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 445
s Uropsilus_gracilis.UroGra_scaffold_46687                    6505 23 -     21056 AGCAGTTAAG-----T------T-CTAGAATT-GTA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 456
s Ursus_maritimus.KK499267.1                                184602 22 +   5085361 agcAATTAAG-----G------T-TTACAA-T-GGA
i Ursus_maritimus.KK499267.1                             C 0 I 436
s Vicugna_pacos.KN270157.1                                   78804 23 +   5488506 agcagttaag-----t------t-ctacaatt-gca
i Vicugna_pacos.KN270157.1                               C 0 I 444
s Vulpes_lagopus.VulLag_flattened_line_12041                107973 23 -    112863 agcAGTTAAT-----A------T-TTAAAATC-TCA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 417
s Xerus_inauris.XerIna_scaffold_2302                        177214 10 -    224448 AGCAATTGAG--------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 402
s Zalophus_californianus.ZalCal_flattened_line_17732         31602 23 -     86975 agcAATTAAG-----A------T-TTAAAATT-GCA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 427
s Zapus_hudsonius.ZapHud_scaffold_11398                       3028 23 -     63895 ACCAAATGAA-----T------T-CAAGAATT-ACA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 801
s Ziphius_cavirostris.ZipCav_flattened_line_334639             243 23 +      3447 agcaattaag-----t------t-ctagaatt-gca
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 I 441
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Psammomys_obesus.NESX01036366.1                            40656  0 +     52041 C
e Muscardinus_avellanarius.MusAve_scaffold_5560               2107 626 -    124358 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53122  0 -    140813 C
e Antilocapra_americana.AntAmePen_scaffold_21030             52491 474 -     68529 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28723  2 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9593  8 +     36723 CAC-A-----------------------TCGT
s Acinonyx_jubatus.LLWD01001279.1                           816104  8 +   1699592 aaa-a-----------------------tggt
i Acinonyx_jubatus.LLWD01001279.1                        I 252 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418604  8 +  29979442 aaa-a-----------------------tagt
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 436 I 21
s Ailurus_fulgens.LNAC01001112.1                            218600  8 +    347723 aaa-a-----------------------tagt
i Ailurus_fulgens.LNAC01001112.1                         I 436 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50545  5 +     53615 AAC-a-----------------------t---
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2572  5 +     13857 AAC-a-----------------------t---
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19127  5 -     21945 AAC-a-----------------------t---
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20812  5 +     32033 AAC-a-----------------------t---
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74068  8 -     84148 aaa-a-----------------------tgat
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46306  8 -     78289 aaa-a-----------------------tgat
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45733  8 +     55831 aaa-a-----------------------tgat
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44196  8 -     64179 aaa-a-----------------------tgat
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1304  8 -      3959 aaa-a-----------------------tgat
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42821  8 +     45454 aaa-a-----------------------tgat
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48470  8 +     70886 aaa-a-----------------------tgat
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10643  8 +     30854 aaa-a-----------------------tgat
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34777  8 +     42133 aaa-a-----------------------tgat
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1591808  8 +   2318259 aaa-g-----------------------tggc
i Ammotragus_lervia.NIVO01071767.1                       I 545 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180213  8 -    412891 aaa-a-----------------------taat
i Anoura_caudifer.AnoCau_scaffold_1412                   I 922 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52965  8 -     68529 aaa-a-----------------------tggc
i Antilocapra_americana.AntAmePen_scaffold_21030         I 474 C 0
s Aotus_azarae.k141_887050                                    3011  8 +     17741 aaa-a-----------------------tggc
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3636  8 -     15923 aaa-a-----------------------tggt
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673918  8 +   5030052 AAA-A-----------------------TGGT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3912  8 -     16391 aaa-a-----------------------tggt
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3471  8 -     17186 aaa-a-----------------------tggt
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27060  8 -     32367 aaa-a-----------------------tggt
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 415 I 5
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  8727  8 -     15198 aaa-a-----------------------taat
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 920 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276533  8 +  21539123 AAA-A-----------------------TGGA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12699  8 +     48076 aaa-a-----------------------tgga
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7834  8 -     28759 aaa-a-----------------------tgga
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35390  8 +     44353 aaa-a-----------------------tgga
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50759  8 -     71267 aaa-a-----------------------tgga
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24817  8 -     33135 aaa-a-----------------------tgga
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966469  8 -  23207421 aaa-a-----------------------tggt
i Balaenoptera_acutorostrata.KI537508.1                  I 446 C 0
s Balaenoptera_bonaerensis.DF411050.1                         2970  8 -     25979 aaa-a-----------------------tggt
i Balaenoptera_bonaerensis.DF411050.1                    I 447 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     92797  8 +    124022 aaa-a-----------------------tggc
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 536 C 0
s Bison_bison.KN261452.1                                     35995  8 +    288883 aaa-a-----------------------tggc
i Bison_bison.KN261452.1                                 I 505 C 0
s Bos_indicus.CM003047.1                                  28423135  8 -  48749331 aaa-a-----------------------tggc
i Bos_indicus.CM003047.1                                 I 505 C 0
s Bos_mutus.JH880303.1                                      768736  8 +   1948126 aaa-a-----------------------tggc
i Bos_mutus.JH880303.1                                   I 505 C 0
s Bos_taurus.CM000203.6                                   27559281  8 -  45695690 aaa-a-----------------------tggc
i Bos_taurus.CM000203.6                                  I 505 C 0
s Bubalus_bubalis.KI419123.1                               1535962  8 -   4408762 aaa-a-----------------------tggc
i Bubalus_bubalis.KI419123.1                             I 505 C 0
s Cacajao_ayresi.k141_96119                                   9624  8 +     28062 aaa-a-----------------------tggt
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44918  8 -     91139 aaa-a-----------------------tggt
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22444  8 +     95584 aaa-a-----------------------tggt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22357  8 +    119600 aaa-a-----------------------tggt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12009  8 +     18648 AAG-C-----------------------tggt
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11517  8 -     13885 aaa-c-----------------------tggt
i Callimico_goeldii.k141_1609886                         C 0 I 26
s Callithrix_geoffroyi.k119_459277                            3611  8 -      8861 AAG-C-----------------------tggt
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456004  8 + 189096842 AAG-C-----------------------TGGT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3525  8 +      8664 AAG-C-----------------------tggt
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7633879  8 +  17673402 aaa-a-----------------------tggt
i Camelus_bactrianus.KN276810.1                          I 433 C 0
s Camelus_dromedarius.KN272107.1                           4668180  8 +   7040546 aaa-a-----------------------tggt
i Camelus_dromedarius.KN272107.1                         I 433 C 0
s Camelus_ferus.KB017975.1                                 1211868  8 +   1652518 aaa-a-----------------------tggt
i Camelus_ferus.KB017975.1                               I 433 C 0
s CanFam4.chr16                                           42508548  8 +  60362399 aaa-a-----------------------tagt
i CanFam4.chr16                                          I 414 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12184  8 -     23171 aaa-a-----------------------tagt
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 414 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225525  8 +   9314153 aaa-a-----------------------tagt
i Canis_lupus_dingo.QKWQ01000480.1                       I 414 C 0
s Canis_lupus_familiaris.chr16                            41618662  8 +  59632846 aaa-a-----------------------tagt
i Canis_lupus_familiaris.chr16                           I 414 C 0
s Canis_lupus_orion.HG994398.1                            45110243  8 -  63665305 aaa-a-----------------------tagt
i Canis_lupus_orion.HG994398.1                           I 414 C 0
s Capra_aegagrus.CM003241.1                               27415811  8 -  46296322 aaa-a-----------------------tggc
i Capra_aegagrus.CM003241.1                              I 546 C 0
s Capra_hircus.CM004588.1                                 26597808  8 +  44709034 aaa-a-----------------------tggc
i Capra_hircus.CM004588.1                                I 546 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    1740  8 -     20114 aaa-a-----------------------tggt
i Capromys_pilorides.CapPil_scaffold_26391               I 519 I 1
s Carlito_syrichta.NW_007259797.1                           274016  8 +    496798 aaa-g-----------------------tggt
i Carlito_syrichta.NW_007259797.1                        I 443 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               3601  8 +      9923 aaa-a-----------------------taat
i Carollia_perspicillata.CarPer_scaffold_107871          I 918 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31302  8 -     39886 aaa-a-----------------------ttgt
i Castor_canadensis.CasCan_scaffold_39952                I 808 I 36
s Catagonus_wagneri.CatWag_scaffold_2839                     82801  8 -    217609 aaa-a-----------------------tggt
i Catagonus_wagneri.CatWag_scaffold_2839                 I 434 C 0
s Cavia_aperea.AVPZ01000300.1                              4999728  8 +  23392119 aaa-a-----------------------tggt
i Cavia_aperea.AVPZ01000300.1                            I 427 I 20
s Cavia_porcellus.DS562891.1                               5003169  8 +  23407841 aaa-a-----------------------tggt
i Cavia_porcellus.DS562891.1                             I 427 I 20
s Cavia_tschudii.CavTsc_scaffold_23560                       66246  8 -     66877 aaa-a-----------------------tggt
i Cavia_tschudii.CavTsc_scaffold_23560                   I 427 I 20
s Cebuella_niveiventris.k141_592277                           6925  8 -     12580 AAG-C-----------------------tggt
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44983  8 +     53515 AAG-C-----------------------tggt
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  375724  8 -  26074798 aaa-a-----------------------tggt
i Cebus_albifrons.Contig27                               C 0 T 2819
s Cebus_olivaceus.k141_1404781                                9793  8 -     34880 aaa-a-----------------------tggt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68889  8 -     89041 aaa-a-----------------------tggt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         1679  8 -     76265 aaa-g-----------------------tggt
i Cephalopachus_bancanus.k141_1140705                    I 459 C 0
s Ceratotherium_simum.JH767749.1                          15495131  8 -  27778364 aaa-a-----------------------cagt
i Ceratotherium_simum.JH767749.1                         I 441 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          21964  8 +     27315 aaa-a-----------------------cagt
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 441 C 0
s Cercocebus_atys.KQ010504.1                                143628  5 -   4669795 AAC-A-----------------------T---
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47367  5 +     47900 AAC-a-----------------------t---
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2800  5 -     14410 AAC-a-----------------------t---
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47182  5 -    148725 AAC-a-----------------------t---
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29460  5 -     40656 AAC-a-----------------------t---
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9419  5 +     20796 AAC-a-----------------------t---
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14533  5 -     17524 AAC-a-----------------------t---
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30265  5 -     34525 AAC-a-----------------------t---
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14045  3 -     25376 Aac-----------------------------
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366632  5 -  39242232 AAC-a-----------------------t---
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272359  3 +  21565898 AAC-----------------------------
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34724  5 -     45857 AAC-a-----------------------t---
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29625  5 -     32606 AAC-a-----------------------t---
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5788  5 +      8499 Aac-a-----------------------t---
i Cercopithecus_petaurista.k141_42573                    C 0 I 1
s Cercopithecus_pogonias.k141_6079                           28187  3 +     70610 Aac-----------------------------
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25147  5 +     36323 AAC-a-----------------------t---
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10718  8 -     32913 aaa-a-----------------------tggt
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21131  8 -     40346 aaa-a-----------------------tggt
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21386  8 +    216457 aaa-a-----------------------tggt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21175  8 +     39636 aaa-a-----------------------tggt
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33160  8 -     52013 aaa-c-----------------------tggt
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44258  8 -    112038 aaa-a-----------------------tggt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9809  8 +     34062 aaa-a-----------------------tggt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346047  5 +  18827391 AAC-a-----------------------t---
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12586  5 -     44032 AAC-a-----------------------t---
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307433  5 - 135778131 AAC-A-----------------------T---
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411846  5 -   2368649 AAT-A-----------------------T---
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381728  5 - 200372422 AAt-a-----------------------t---
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5280  5 -     84244 AAt-a-----------------------t---
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810336  8 +  53390261 aaa-g-----------------------tggt
i Condylura_cristata.JH655891.1                          I 451 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          5883  8 -      8242 aa-aa-----------------------tagt
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 435 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12151  8 +     12657 aat-a-----------------------tggt
i Crocidura_indochinensis.CroInd_scaffold_77846          I 394 I 24
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7487  8 +     87169 aaa-a-----------------------tagt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 424 I 25
s Ctenodactylus_gundi.CteGun_scaffold_65                    649781  8 -   1526836 aaa-a-----------------------tggt
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 432 I 20
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22409  8 +     50838 aaa-a-----------------------cagt
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 352 I 1
s Cuniculus_paca.CunPac_flattened_line_7025                  10922  3 +     36344 aaa-----------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              I 426 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31340  8 +     75252 aaa-a-----------------------tggt
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 423 I 1
s Delphinapterus_leucas.KZ290073.1                        18634873  8 -  35494412 aaa-a-----------------------tggt
i Delphinapterus_leucas.KZ290073.1                       I 444 C 0
s Desmodus_rotundus.KZ672289.1                            11868592  8 -  20541912 aaa-a-----------------------taat
i Desmodus_rotundus.KZ672289.1                           I 922 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667406  8 -   1390856 aaa-a-----------------------cagt
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 442 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142204  8 -    198055 aaa-a-----------------------cagt
i Diceros_bicornis.DicBicMic_scaffold_5955               I 442 C 0
s Dipodomys_ordii.KN672350.1                              18954735  8 -  37912305 aaa-a-----------------------tagt
i Dipodomys_ordii.KN672350.1                             I 864 I 230
s Dipodomys_stephensi.DipSte_scaffold_89095                   9649  8 -     10735 aaa-a-----------------------tagt
i Dipodomys_stephensi.DipSte_scaffold_89095              I 870 I 230
s Dolichotis_patagonum.DolPat_scaffold_80628                 12471  8 +     14636 aaa-a-----------------------tggt
i Dolichotis_patagonum.DolPat_scaffold_80628             I 423 I 1
s Eidolon_helvum.AWHC01266696.1                               9245  7 +     19438 aa--a-----------------------tagt
i Eidolon_helvum.AWHC01266696.1                          I 444 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       245592  8 -    607251 aaa-a-----------------------tggc
i Elaphurus_davidianus.JRFZ01104969.1                    I 525 C 0
s Enhydra_lutris.KZ291758.1                               24925098  8 +  41312741 aaa-a-----------------------tagt
i Enhydra_lutris.KZ291758.1                              I 436 C 0
s Eptesicus_fuscus.JH977646.1                             12582428  8 +  14770903 aaa-a-----------------------tagt
i Eptesicus_fuscus.JH977646.1                            I 1113 C 0
s Equus_asinus.JREZ01000139.1                              3044870  8 -   4378816 aaa-a-----------------------tagt
i Equus_asinus.JREZ01000139.1                            I 966 C 0
s Equus_caballus.CM000403.2                               21378800  8 +  39960074 aaa-a-----------------------tagt
i Equus_caballus.CM000403.2                              I 962 C 0
s Equus_przewalskii.KK951119.1                              414782  8 -    498745 aaa-a-----------------------tagt
i Equus_przewalskii.KK951119.1                           I 962 C 0
s Erinaceus_europaeus.JH835339.1                           3671107  8 +   7059049 aaa-a-----------------------ttat
i Erinaceus_europaeus.JH835339.1                         I 594 C 0
s Erythrocebus_patas.Contig38                               265575  5 +  21539334 AAC-a-----------------------t---
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74084  7 -    133382 a-a-a-----------------------tggt
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 446 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              1798  8 +     25849 aaa-a-----------------------tggt
i Eubalaena_japonica.EubJap_flattened_line_57114         I 447 C 0
s Felis_catus.CM001381.2                                 186250107  8 - 206538554 aaa-a-----------------------tggt
i Felis_catus.CM001381.2                                 I 252 C 0
s Felis_catus_fca126.CM031415.1                          185120063  8 - 205367284 aaa-a-----------------------tggt
i Felis_catus_fca126.CM031415.1                          I 252 C 0
s Felis_nigripes.FelNig_flattened_line_44075                   705  8 +     25330 aaa-a-----------------------tggt
i Felis_nigripes.FelNig_flattened_line_44075             I 252 C 0
s Fukomys_damarensis.KN121974.1                            2925703  8 -   3816255 aaa-a-----------------------tgct
i Fukomys_damarensis.KN121974.1                          I 428 I 1
s Galeopterus_variegatus.GalVar_scaffold_51812                4669  8 -     28519 aaa-a-----------------------tggt
i Galeopterus_variegatus.GalVar_scaffold_51812           I 448 I 20
s Giraffa_tippelskirchi.LVKQ01S007888.1                       1855  8 +    660261 aaa-a-----------------------tggc
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 632 C 0
s Glis_glis.GliGli_scaffold_163929                            4734  8 -      6791 aca-a-----------------------tggt
i Glis_glis.GliGli_scaffold_163929                       I 661 I 35
s Gorilla_beringei.k141_3218903                                344  8 -      2763 aac-a-----------------------tcgt
i Gorilla_beringei.k141_3218903                          I 28 I 132
s Gorilla_gorilla.LT578341.1                                258765  8 - 186649187 aac-a-----------------------tcgt
i Gorilla_gorilla.LT578341.1                             C 0 I 81
s Graphiurus_murinus.GraMur_scaffold_10447                    6609  8 -     78134 ata-a-----------------------tggt
i Graphiurus_murinus.GraMur_scaffold_10447               I 698 I 36
s Helogale_parvula.HelPar_flattened_line_2585                33891  8 -    327341 aaa-a-----------------------tagt
i Helogale_parvula.HelPar_flattened_line_2585            I 424 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15522  8 +     48891 aaa-a-----------------------tggc
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 533 C 0
s Heterocephalus_glaber.JH602082.1                         1938144  8 -  22651954 aaa-a-----------------------tgct
i Heterocephalus_glaber.JH602082.1                       I 429 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_38803               10910  8 -     36432 aaa-a-----------------------tggt
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 444 C 0
s Hipposideros_armiger.JXIK01000431.1                      1555954  8 -   1711038 aa-aa-----------------------cagt
i Hipposideros_armiger.JXIK01000431.1                    I 463 C 0
s Hipposideros_galeritus.HipGal_scaffold_363447                323  8 +       852 aa-aa-----------------------cagt
i Hipposideros_galeritus.HipGal_scaffold_363447          N 0 C 0
s Hoolock_leuconedys.ctg274                                    145238  8 -    630532 aac-a-----------------------tcgc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73523  8 +     83186 aaa-a-----------------------tagt
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 416 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75078  8 +    143317 aaa-a-----------------------tggt
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 428 I 1
s Hylobates_agilis.k141_1155965                               8284  8 +     12352 aac-a-----------------------tcgt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15471  8 +     55766 aac-a-----------------------tcgt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2054999  8 + 191637585 aac-a-----------------------tcgt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803877  8 +  11177569 aac-a-----------------------tcgt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      10925  8 -    135385 aaa-a-----------------------tggt
i Hystrix_cristata.HysCri_scaffold_5660                  I 476 I 1
s Ictidomys_tridecemlineatus.JH393364.1                     390174  7 +   7955117 aaa-t-----------------------tgt-
i Ictidomys_tridecemlineatus.JH393364.1                  I 415 I 32
s Inia_geoffrensis.IniGeo_flattened_line_69447               12977  8 -     16823 aaa-a-----------------------tggt
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 444 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 74817  8 -     97402 aaa-a-----------------------tggt
i Kogia_breviceps.KogBre_flattened_line_3970             I 444 C 0
s Lagothrix_lagothricha.k141_246028                          45084  8 +    110728 AAA-A-----------------------TGGA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    35845  8 -     49555 aaa-a-----------------------tagt
i Lasiurus_borealis.LasBor_scaffold_26245                I 974 C 0
s Leontocebus_fuscicollis.k141_3470480                         565  8 -     23187 aaa-c-----------------------tggt
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            878  8 -     14280 aaa-c-----------------------tggt
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         521  8 +      3713 aaa-c-----------------------tggt
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      712  8 +      8855 aaa-c-----------------------tggt
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5514  8 -     13645 aaa-c-----------------------tggt
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816398  8 -   3914936 aaa-a-----------------------tagt
i Leptonychotes_weddellii.KB714746.1                     I 431 C 0
s Lepus_americanus.LepAme_scaffold_56121                     21609  8 +     24238 gaa-g-----------------------tggt
i Lepus_americanus.LepAme_scaffold_56121                 I 566 C 0
s Lipotes_vexillifer.KE559953.1                             344159  8 +    662738 aaa-a-----------------------tggt
i Lipotes_vexillifer.KE559953.1                          I 441 C 0
s Lophocebus_aterrimus.ctg367                               336510  5 -   1826925 AAC-a-----------------------t---
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                41617817  8 +  59628241 aaa-a-----------------------tagt
i Lycaon_pictus.CM007581.1                               I 414 C 0
s Macaca_arctoides.k141_1757516                              47902  5 -     61512 AAC-a-----------------------t---
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375564  5 -  60120075 AAC-a-----------------------t---
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27832  5 +     30207 AAC-a-----------------------t---
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2670  5 -      5035 AAC-a-----------------------t---
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27785  5 +     30527 AAC-a-----------------------t---
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38961  5 -     50087 AAC-a-----------------------t---
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48706  5 +     51645 AAC-a-----------------------t---
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417908  5 - 187317192 AAC-A-----------------------T---
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402139  5 +  25927173 AAC-A-----------------------T---
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51310  5 -     62418 AAC-a-----------------------t---
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3841  5 +     14901 AAC-a-----------------------t---
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47783  5 +     59329 AAC-a-----------------------t---
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273690  5 +    668171 AAC-a-----------------------t---
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2322  5 -      5049 AAC-a-----------------------t---
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5488  5 +     17132 AAC-a-----------------------t---
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226178  7 -    270270 aa--a-----------------------tagt
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 442 C 0
s Mandrillus_leucophaeus.scaffold280                        324978  5 +  24302211 AAC-a-----------------------t---
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359809  5 -    752769 AAC-a-----------------------t---
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676457  8 -    737560 aaa-a-----------------------tagt
i Manis_javanica.JSZB01003497.1                          I 442 C 0
s Manis_pentadactyla.KN006162.1                             223754  8 +    317179 aaa-a-----------------------tagt
i Manis_pentadactyla.KN006162.1                          I 439 C 0
s Marmota_marmota.CZRN01000018.1                           7504416  7 +  40650429 aaa-t-----------------------tga-
i Marmota_marmota.CZRN01000018.1                         I 412 I 20
s Megaderma_lyra.MegLyr_scaffold_4542                       153580  8 +    207569 aa-aa-----------------------tagt
i Megaderma_lyra.MegLyr_scaffold_4542                    I 526 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29159  8 -     74585 aaa-a-----------------------tagt
i Mellivora_capensis.MelCap_flattened_line_19308         I 432 I 28
s Mesoplodon_bidens.MesBid_scaffold_6114                     90443  8 +     93471 aaa-a-----------------------tggt
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 441 C 0
s Mico_argentatus.k141_582562                                12108  8 +     17804 AAG-C-----------------------tggt
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12608  8 -     12984 AAG-C-----------------------tggt
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20927  8 -     26561 AAG-C-----------------------tggt
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188173  8 +    200668 aaa-a-----------------------taat
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 712 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368004  8 -   8254450 aac-a-----------------------tagt
i Miniopterus_natalensis.LDJU01000034.1                  I 1115 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             45735  8 -     48117 aac-a-----------------------tagt
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 1124 C 0
s Miopithecus_ogouensis.k141_1534655                         25076  3 -     27822 AAC-----------------------------
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11628  8 +     27589 aaa-a-----------------------tagt
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 430 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362551  8 +    437263 aaa-a-----------------------tggt
i Monodon_monoceros.MonMon_M_scaffold_103                I 445 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182589  8 +    366855 aaa-a-----------------------taat
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 910 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  31753  8 -     82753 aaa-a-----------------------tggc
i Moschus_moschiferus.MosMos_scaffold_13123              I 533 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21640  8 -     63510 aaa-a-----------------------tagt
i Mungos_mungo.MunMun_flattened_line_18455               I 424 C 0
s Murina_feae.MurFea_scaffold_17764                          44978  8 +     47283 aaa-a-----------------------tagt
i Murina_feae.MurFea_scaffold_17764                      I 1106 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               2733  8 -    124358 aca-a-----------------------tggt
i Muscardinus_avellanarius.MusAve_scaffold_5560          I 626 I 36
s Mustela_putorius.JH418006.1                             14358023  8 +  14710649 aaa-a-----------------------tagt
i Mustela_putorius.JH418006.1                            I 436 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                       804  8 -     27262 aaa-c-----------------------tggt
i Myocastor_coypus.MyoCoy_scaffold_57531                 N 0 I 1
s Myotis_brandtii.KE162005.1                               9796986  8 +  10118263 aaa-a-----------------------tagt
i Myotis_brandtii.KE162005.1                             I 1098 C 0
s Myotis_davidii.KB100139.1                                4391161  8 +   6019432 aaa-a-----------------------tagt
i Myotis_davidii.KB100139.1                              I 1102 C 0
s Myotis_lucifugus.GL429869.1                               387199  8 +   4330536 aaa-a-----------------------tagt
i Myotis_lucifugus.GL429869.1                            I 1109 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         5986  8 +     18357 aaa-a-----------------------tagt
i Myotis_myotis.MyoMyo_scaffold_66571                    I 1110 C 0
s Nasalis_larvatus.k141_1350636                              31855  5 +     34575 AAC-a-----------------------t---
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469077  8 -  31847680 aaa-a-----------------------tagt
i Neomonachus_schauinslandi.NINY01007730.1               I 431 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235217  8 -   7148211 aaa-a-----------------------tggt
i Neophocaena_asiaeorientalis.KZ687982.1                 I 445 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   130923  8 -    149072 aaa-a-----------------------tact
i Noctilio_leporinus.NocLep_scaffold_7894                I 641 C 0
s Nomascus_annamensis.k141_1771965                           56172  8 -    132029 aac-a-----------------------tcgt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12267  8 -     16345 aac-a-----------------------tcgt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18156  8 +     22201 aac-a-----------------------tcgt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416386  8 -  22158432 aac-a-----------------------tcgt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28561  8 -     54323 aac-a-----------------------tcgt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201519  8 +   9404916 aaa-a-----------------------tagt
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 416 C 0
s Octodon_degus.JH651603.1                                11059068  8 -  11899542 aaa-a-----------------------tggt
i Octodon_degus.JH651603.1                               I 369 I 1
s Odobenus_rosmarus.KB229312.1                             1454848  8 +   2017862 aaa-a-----------------------tagt
i Odobenus_rosmarus.KB229312.1                           I 434 C 0
s Odocoileus_virginianus.KZ100018.1                         442146  8 -    630418 aaa-a-----------------------tggc
i Odocoileus_virginianus.KZ100018.1                      I 540 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          21806  8 +    150152 aaa-a-----------------------tggc
i Okapia_johnstoni.LVCL01S0005463.1                      I 644 C 0
s Orcinus_orca.KB316932.1                                  8105621  8 +  10937097 aaa-a-----------------------tggt
i Orcinus_orca.KB316932.1                                I 445 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108270  8 - 174332312 gaa-g-----------------------tggt
i Oryctolagus_cuniculus.CM000791.1                       I 561 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42477  8 +    559221 aaa-a-----------------------tagt
i Otocyon_megalotis.JAEUCK010005147.1                    I 416 C 0
s Ovis_aries.CM001607.2                                   26410548  8 -  44047080 aaa-a-----------------------tggc
i Ovis_aries.CM001607.2                                  I 533 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11171  8 +     17875 aaa-a-----------------------tggc
i Ovis_canadensis.OviCan_scaffold_67953                  I 533 C 0
s Pan_paniscus.AJFE02001037.1                                  123  8 +      1186 AAC-A-----------------------TCGT
i Pan_paniscus.AJFE02001037.1                            I 28 I 59
s Pan_troglodytes.CM009242.2                               1476748  8 - 189151597 AAC-A-----------------------TCGT
i Pan_troglodytes.CM009242.2                             I 28 I 54
s Panthera_onca.PanOnc_flattened_line_3271                   28109  8 -    230217 aaa-a-----------------------tggt
i Panthera_onca.PanOnc_flattened_line_3271               I 252 C 0
s Panthera_pardus.KV860321.1                              18465341  8 -  18783137 aaa-a-----------------------tggt
i Panthera_pardus.KV860321.1                             I 252 C 0
s Panthera_tigris.KE722367.1                               3975942  8 +   8748460 aaa-a-----------------------tggt
i Panthera_tigris.KE722367.1                             I 252 C 0
s Pantholops_hodgsonii.KE114653.1                          1622066  8 +   2937107 aaa-a-----------------------tggc
i Pantholops_hodgsonii.KE114653.1                        I 533 C 0
s Papio_anubis.CM001495.2                                   245987  5 - 183742232 AAC-A-----------------------T---
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12272  5 +     21308 AAC-a-----------------------t---
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295015  5 -  20919399 AAC-a-----------------------t---
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24912  5 -     27687 AAC-a-----------------------t---
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1591  5 +     10553 AAC-a-----------------------t---
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1551  5 -     10386 AAC-a-----------------------t---
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18281  8 +     78924 aaa-a-----------------------tcaa
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 414 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        6951  8 +      9367 AAA-A-----------------------TAGT
i Perognathus_longimembris.PerPac_flattened_line_89005   I 906 I 225
s Petromus_typicus.PetTyp_scaffold_17301                     35160  8 -     56120 aag-a-----------------------tggt
i Petromus_typicus.PetTyp_scaffold_17301                 I 338 I 32
s Phocoena_phocoena.PhoPho_flattened_line_24159               7143  8 -     63832 aaa-a-----------------------tggt
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 443 C 0
s Piliocolobus_badius.k141_2704958                            5233  5 +     55023 AAC-a-----------------------t---
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4755  5 -     89929 AAC-a-----------------------t---
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5345  5 +     40849 AAC-a-----------------------t---
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257075  5 +  14605196 AAC-A-----------------------T---
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7536  8 +     22231 aaa-a-----------------------cagc
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 1092 C 0
s Pithecia_albicans.k141_1239476                             66614  8 +    207309 aaa-a-----------------------tggt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7702  8 -     25401 aaa-a-----------------------tggt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33450  8 +     58159 aaa-a-----------------------tggt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33726  8 +     63561 aaa-a-----------------------tggt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33486  8 +     51148 aaa-a-----------------------tggt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558456  8 -   4542175 aaa-a-----------------------tggt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33470  8 +     51125 aaa-a-----------------------tggt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4164  8 +     19503 aaa-a-----------------------tggt
i Platanista_gangetica.PlaMin_flattened_line_83166       I 443 C 0
s Plecturocebus_bernhardi.k141_2549090                        9887  8 +     39866 aaa-a-----------------------tggt
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4969  8 -      9282 aaa-a-----------------------tggt
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44373  8 -     87950 aaa-a-----------------------tggt
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44767  8 -     88961 aaa-a-----------------------tggt
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9465  8 -     39403 aaa-a-----------------------tggt
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44416  8 +     87928 aaa-a-----------------------tggt
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9464  8 -     60166 aaa-a-----------------------tggt
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16385  8 -     67232 aaa-a-----------------------tggt
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44317  8 -     90634 aaa-a-----------------------tggt
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45784  8 +     89403 aaa-a-----------------------tggt
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181928  8 - 189387572 AAC-A-----------------------TTGT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196671  8 -   9816681 aac-a-----------------------ttgt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30435  5 +     69807 AAC-a-----------------------t---
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47616  5 -     80239 AAC-a-----------------------t---
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55257  9 -     66298 aaa-c-t---------------------taat
i Pteronotus_parnellii.KE847780.1                        I 662 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7615 31 -     18639 aaa-aatattttaacaaatatcctttgttaaa
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 436 C 0
s Pteropus_alecto.KB030862.1                               5843797  7 -  28871421 aa--a-----------------------tagt
i Pteropus_alecto.KB030862.1                             I 452 C 0
s Pteropus_vampyrus.KN525825.1                             3540313  7 -   4952924 aa--a-----------------------tagt
i Pteropus_vampyrus.KN525825.1                           I 452 C 0
s Puma_concolor.QAVW01001104.1                            18102330  8 +  38429054 aaa-a-----------------------tggt
i Puma_concolor.QAVW01001104.1                           I 252 C 0
s Pygathrix_cinerea.k141_1153803                             29802  5 +     91421 AAC-a-----------------------t---
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156354  5 -   7812017 AAC-a-----------------------t---
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10654  5 +     72585 AAC-a-----------------------t---
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4667  8 -     55207 aaa-a-----------------------tggc
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 540 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2917723  7 +   3329780 ca--a-----------------------aagt
i Rhinolophus_sinicus.LVEH01000134.1                     I 446 C 0
s Rhinopithecus_bieti.k119_778604                             4261  4 +      7119 -ac-a-----------------------t---
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124931  4 + 195417433 -AC-A-----------------------T---
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239103  4 -   7961872 -AC-a-----------------------t---
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78291  7 -    116970 aa--a-----------------------tagt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 443 C 0
s Saguinus_bicolor.k141_161125                                9056  8 +     12412 aaa-c-----------------------tggt
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               517  8 +      9876 aaa-c-----------------------tggt
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16120  8 -     24931 AAA-C-----------------------TGGT
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1000  8 +      4564 AAA-C-----------------------TGGT
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3805  8 -      7443 AAA-C-----------------------TGGT
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394710  8 - 209938924 aaa-c-----------------------tggt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1420  8 +     10149 AAA-C-----------------------TGGT
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                760  8 +     10417 aaa-c-----------------------tggt
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14118  8 +     16473 aaa-a-----------------------tggc
i Saiga_tatarica.SaiTat_scaffold_39512                   I 522 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110884  8 + 121099817 AAA-A-----------------------TGGT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32451  8 -     47369 aaa-a-----------------------tggt
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32837  8 -     79414 AAA-A-----------------------TGGT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29528  8 -     34454 AAA-A-----------------------TGGT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16929  8 -     22428 AAA-A-----------------------TGGT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32083  8 -     47109 aaa-a-----------------------tggt
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240113  8 +   5703754 aaa-a-----------------------tggt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9703  8 +     21866 aaa-a-----------------------tggt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122136  8 +    313613 aaa-a-----------------------tgat
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3208 C 0
s Semnopithecus_entellus.k141_583282                          1241  5 +     11297 AAC-a-----------------------t---
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31634  5 +     58920 AAC-a-----------------------t---
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18132  5 -     45317 AAC-a-----------------------t---
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25790  5 -     42441 AAC-a-----------------------t---
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28466  5 -     29113 AAC-a-----------------------t---
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31543  5 -     48123 AAC-a-----------------------t---
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1866934  8 -   1910179 aaa-a-----------------------tgat
i Solenodon_paradoxus.SolPar_flattened_line_126          I 431 I 24
s Sorex_araneus.JH798187.1                                 4674150  8 +  18376816 aaa-a-----------------------tgat
i Sorex_araneus.JH798187.1                               I 417 C 0
s Spermophilus_dauricus.KZ294078.1                         1871741  7 +   3870691 aaa-t-----------------------tgg-
i Spermophilus_dauricus.KZ294078.1                       I 415 I 2
s Spilogale_gracilis.SpiGra_flattened_line_13525             15845  8 -     97271 aaa-a-----------------------tagt
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 427 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128488  8 +    196729 aaa-a-----------------------tagt
i Suricata_suricatta.SurSur_flattened_line_6629          I 420 C 0
s Sus_scrofa.CM000828.4                                    6647747  8 +  69701581 aaa-a-----------------------tggt
i Sus_scrofa.CM000828.4                                  I 442 C 0
s Symphalangus_syndactylus.tarseq_199                       393643  8 +   1523678 aac-a-----------------------tcgt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17209  8 +     22964 aaa-a-----------------------tagt
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 431 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194588  8 +    199430 aaa-a-----------------------tagt
i Tapirus_indicus.TapInd_scaffold_7432                   I 430 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108568  8 -    539355 aaa-a-----------------------tagt
i Tapirus_terrestris.TapTer_scaffold_755                 I 443 C 0
s Tarsius_lariang.k141_1733899                                4207  8 +      9917 aaa-g-----------------------cgat
i Tarsius_lariang.k141_1733899                           I 445 C 0
s Tarsius_wallacei.k141_226975                               11003  8 +     20590 aaa-g-----------------------cgat
i Tarsius_wallacei.k141_226975                           I 445 C 0
s Theropithecus_gelada.CM009954.1                           355796  5 - 186847797 AAC-A-----------------------T---
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27442  8 -     33621 aaa-a-----------------------tagt
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 410 I 30
s Tonatia_saurophila.TonSau_scaffold_294                    483516  8 -    610378 aaa-a-----------------------taat
i Tonatia_saurophila.TonSau_scaffold_294                 I 921 C 0
s Trachypithecus_auratus.k141_1189070                        23542  5 +     26378 AAC-a-----------------------t---
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36341  5 -     78344 AAC-a-----------------------t---
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22867  5 +     25722 AAC-a-----------------------t---
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31297  5 -     62838 AAC-a-----------------------t---
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31288  5 +     46913 AAC-a-----------------------t---
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12025  5 -     28527 AAC-a-----------------------t---
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33232  5 -     64340 AAC-a-----------------------t---
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31270  5 -     63452 AAC-a-----------------------t---
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12717  5 +     22490 AAC-a-----------------------t---
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          683  5 +      9911 AAC-a-----------------------t---
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          478  5 -     33539 AAC-a-----------------------t---
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258237  5 -   6242583 AAC-a-----------------------t---
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4256  5 +     19340 AAC-a-----------------------t---
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177376  8 -    200418 aaa-a-----------------------aggt
i Tragulus_javanicus.TraJav_scaffold_3462                I 818 C 0
s Tupaia_chinensis.KB320699.1                              1839149  8 -   4065304 aaa-a-----------------------tggc
i Tupaia_chinensis.KB320699.1                            I 453 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13241  8 -     70247 aaa-a-----------------------tgac
i Tupaia_tana.TupTan_flattened_line_394                  I 452 C 0
s Tursiops_truncatus.MRVK01000835.1                       17368746  8 -  33153633 aaa-a-----------------------tggt
i Tursiops_truncatus.MRVK01000835.1                      I 445 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    6984  8 -     21056 aaa-a-----------------------gggt
i Uropsilus_gracilis.UroGra_scaffold_46687               I 456 I 27
s Ursus_maritimus.KK499267.1                                185060  8 +   5085361 aaa-a-----------------------tagt
i Ursus_maritimus.KK499267.1                             I 436 I 21
s Vicugna_pacos.KN270157.1                                   79271  8 +   5488506 aaa-a-----------------------tggt
i Vicugna_pacos.KN270157.1                               I 444 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108413  8 -    112863 aaa-a-----------------------tagt
i Vulpes_lagopus.VulLag_flattened_line_12041             I 417 C 0
s Xerus_inauris.XerIna_scaffold_2302                        177626  7 -    224448 aaa-a-----------------------tgg-
i Xerus_inauris.XerIna_scaffold_2302                     I 402 I 32
s Zalophus_californianus.ZalCal_flattened_line_17732         32052  8 -     86975 aaa-a-----------------------tagt
i Zalophus_californianus.ZalCal_flattened_line_17732     I 427 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       3852  8 -     63895 aaa-a-----------------------tatt
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 801 I 32
s Ziphius_cavirostris.ZipCav_flattened_line_334639             707  8 +      3447 aaa-a-----------------------tggt
i Ziphius_cavirostris.ZipCav_flattened_line_334639       I 441 C 0
e Nannospalax_galili.KL204047.1                             949043 1021 +   3037898 I
e Chrysochloris_asiatica.ChrAsi_scaffold_510450               1901 278 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    49396 73 +    145209 I
e Echinops_telfairi.JH980293.1                            62858214 80 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               2589 223 +     11607 I
e Elephantulus_edwardii.JH947257.1                         9113279 68 -  10337057 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            609346 87 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                 1866 90 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   22296 79 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2112554 81 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            15196 81 -     19938 I
e Trichechus_manatus.JH594705.1                            6485301 82 -  10818551 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    52416 204 +     77746 I
e Rattus_norvegicus.chr16                                 37025549 227 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            40656  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_128773                 2495 82 -     12774 I
e Peromyscus_maniculatus.KI615324.1                         250640 195 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    7426 189 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    96853 224 -    140218 I
e Mus_spretus.CM004101.1                                  39499879 234 + 130317789 I
e Mus_pahari.LT608297.1                                   58218919 237 +  89631738 I
e Mus_musculus.chr8                                       41690959 235 + 129401213 I
e Mus_caroli.LT608237.1                                   35597415 239 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15966234 226 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17432489 197 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53122  0 -    140813 C
e Loxodonta_africana.GL010049.1                           39087697 84 +  43346337 I
e Jaculus_jaculus.JH725527.1                               1242424 337 +   9596543 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                5963 82 +      8654 I
e Ellobius_talpinus.LOJH01026522.1                           16748 226 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          34820 225 +    110024 I
e Cricetulus_griseus.LT883664.1                          213118640 205 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 47107 226 -     83289 I
e Allactaga_bullata.AllBul_scaffold_20030                    20875 333 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28723  2 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9601 59 +     36723 TTA-TA-AGCCCCT---GAG---TCTAAC--------CA---------------GT----------G-T--TT----T--GAG-TTT-T-TCA-C----TTATCTTA-T-----GT-----GTAGC-------CA
s Acinonyx_jubatus.LLWD01001279.1                           816112 54 +   1699592 ata-ga-agcttac---aag---tctatc--------ca---------------gt----------t-t--tt----a--aga--tt-t-tca-ct-------tttc-t-----gt-----gtgac-------t-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418633 35 +  29979442 -------------------------------------------------------cattt--a---t-t--at----t--a-----t-t-tca-ctt-ct---ttcc-t-----gt-----gtggc-------c-
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 21 C 0
s Ailurus_fulgens.LNAC01001112.1                            218608 63 +    347723 ata-ta-agcttcc---aag---tctatcc--t-----t---------------ttttttt-----t-t--tt----a--agg--tt-t-tca-ctt-ct---ttcc-t-----gt-----gtggc-------c-
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50550 57 +     53615 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2577 57 +     13857 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19132 57 -     21945 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20817 57 +     32033 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74076 45 -     84148 ata-ta-agcccct---aag---tctaac--------ca---------------ct----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Alouatta_belzebul.k141_1011583                         C 0 I 9
s Alouatta_caraya.k141_1109140                               46314 45 -     78289 ata-ta-agcccct---aag---tctaac--------ca---------------ct----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Alouatta_caraya.k141_1109140                           C 0 I 9
s Alouatta_discolor.k141_2561099                             45741 45 +     55831 ata-ta-agcccct---aag---tctaac--------ca---------------ct----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Alouatta_discolor.k141_2561099                         C 0 I 9
s Alouatta_juara.k141_1687208                                44204 45 -     64179 ata-ta-agcccct---aag---tctaac--------ca---------------ct----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Alouatta_juara.k141_1687208                            C 0 I 9
s Alouatta_macconnelli.k141_1277969                           1312 45 -      3959 aga-ta-agcccct---aag---tctaac--------ca---------------ct----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Alouatta_macconnelli.k141_1277969                      C 0 I 9
s Alouatta_nigerrima.k141_376068                             42829 45 +     45454 ata-ta-agcccct---aag---tctaac--------ca---------------ct----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Alouatta_nigerrima.k141_376068                         C 0 I 9
s Alouatta_palliata.k141_638677                              48478 45 +     70886 ata-ta-agcccct---aag---tctaac--------ca---------------ct----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Alouatta_palliata.k141_638677                          C 0 I 9
s Alouatta_puruensis.k141_251022                             10651 45 +     30854 ata-ta-agcccct---aag---tctaac--------ca---------------ct----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Alouatta_puruensis.k141_251022                         C 0 I 9
s Alouatta_seniculus.k141_928287                             34785 45 +     42133 ata-ta-agcccct---aag---tctaac--------ca---------------ct----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Alouatta_seniculus.k141_928287                         C 0 I 9
s Ammotragus_lervia.NIVO01071767.1                         1591816 57 +   2318259 ata-ta-agctacc---gag---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tttc-t-----gt-----gtaga-------c-
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180221 57 -    412891 atg-ga-agcctca---gag---tctaac--------ca---------------tt----------t-c--tt----c--agg--tt-t-tta-ctt-ct---tttc-t-----ct-----gcagt-------c-
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             52973 57 -     68529 ata-ta-agctacc---aag---tctaat--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ttt-ct---tttc-t-----gt-----atagt-------c-
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3019 59 +     17741 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----a--gga-att-t-tca-c---------tta-tcttgcct-----gtagc-------ca
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3644 59 -     15923 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----a--gga-att-t-tca-c---------tta-tcttgcct-----gtagc-------ca
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673926 59 +   5030052 ATA-TA-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-C--TT----A--GGA-ATT-T-TCA-C---------TTA-TCTTGCCT-----GTAGC-------CA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3920 59 -     16391 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----a--gga-att-t-tca-c---------tta-tcttgcct-----gtagc-------ca
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3479 59 -     17186 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----a--gga-att-t-tca-c---------tta-tcttgcct-----gtagc-------ca
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27073 25 -     32367 -------agtttct---gtg---tctgac--------ct---------------ct----------g-c--tt----t---------------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 5 I 30
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  8735 57 -     15198 ata-ga-agcttcc---aag---tctaac--------ca---------------ct----------t-c--tt----t--aga--tt-t-tta-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276541 59 +  21539123 ata-ta-aacccct---aag---tctaac--------ca---------------gt----------g-c--ct----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12707 59 +     48076 ata-ta-aacccct---aag---tctaac--------ca---------------gt----------g-c--ct----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7842 59 -     28759 ata-ta-aacccct---aag---tctaac--------ca---------------gt----------g-c--ct----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35398 59 +     44353 ata-ta-aacccct---aag---tctaac--------ca---------------gt----------g-c--ct----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50767 59 -     71267 ata-ta-aacccct---aag---tctaac--------ca---------------gt----------g-c--ct----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24825 59 -     33135 ata-ta-aacccct---aag---tctaac--------ca---------------gt----------g-c--ct----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966477 57 -  23207421 ata-ta-aacttcc---aag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-t-----at-----gtagt-------c-
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         2978 57 -     25979 ata-ta-aacttcc---aag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-t-----at-----gtagt-------c-
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     92805 57 +    124022 ata-ta-agctacc---acg---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tttc-t-----gt-----gtaga-------c-
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36003 57 +    288883 ata-ta-agctacc---gag---tccaaa--------ca---------------tt----------c-c--tt----g--gag--at-t-tta-ctt-ct---tttc-t-----gt-----gtaga-------c-
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423143 57 -  48749331 ata-ta-agctact---gan---tccaaa--------ca---------------tt----------c-c--tt----g--gag--at-t-tta-ctt-ct---tttc-t-----gt-----gtaga-------c-
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      768744 57 +   1948126 ata-ta-agctacc---gag---tccaaa--------ca---------------tt----------c-c--tt----g--gag--at-t-tta-ctt-ct---tttc-t-----gt-----gtaga-------c-
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559289 57 -  45695690 ata-ta-agctact---gag---tccaaa--------ca---------------tt----------c-c--tt----g--gag--at-t-tta-ctt-ct---tttc-t-----gt-----gtaga-------c-
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1535970 57 -   4408762 ata-ta-atctacc---aag---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tgtc-t-----gt-----ataga-------c-
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9632 59 +     28062 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44926 59 -     91139 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22452 59 +     95584 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22365 59 +    119600 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12017 58 +     18648 aca-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-tttca-c---------ttc-t-----c--atctgtagc-------ca
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11551 29 -     13885 --------------------------------------------------------------------------------ggt-ttt-t-tca-c---------tta-t-----cttatctgtagc-------ca
i Callimico_goeldii.k141_1609886                         I 26 C 0
s Callithrix_geoffroyi.k119_459277                            3619 60 -      8861 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-tttca-c---------ttc-t-----cttatctgtagc-------ca
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456012 60 + 189096842 ATA-TA-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-C--TT----T--GGG-TTT-TTTCA-C---------TTC-T-----CTTATCTGTAGC-------CA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3533 60 +      8664 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-tttca-c---------ttc-t-----cttatctgtagc-------ca
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7633887 57 +  17673402 aaa-ta-agcttct---gag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tca-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4668188 57 +   7040546 aaa-ta-agcttct---gag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tca-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1211876 57 +   1652518 aaa-ta-agcttct---gag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tca-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42508556 60 +  60362399 ata-ta-agcttcc---aag---tct-----------tt---------------tttttttt----t-t--tt----t--agg--tt-t-tca-ct-act---tttc-t-----gt-----gttgc-------c-
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12192 59 -     23171 ata-ta-agcttcc---aag---tct-----------tt---------------ttttttt-----t-t--tt----t--agg--tt-t-tca-ct-act---tttc-t-----gt-----gttgc-------c-
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225533 59 +   9314153 ata-ta-agcttcc---aag---tct-----------tt---------------ttttttt-----t-t--tt----t--agg--tt-t-tca-ct-act---tttc-t-----gt-----gttgc-------c-
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41618670 59 +  59632846 ata-ta-agcttcc---aag---tct-----------tt---------------ttttttt-----t-t--tt----t--agg--tt-t-tca-ct-act---tttc-t-----gt-----gttgc-------c-
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110251 59 -  63665305 ata-ta-agcttcc---aag---tct-----------tt---------------ttttttt-----t-t--tt----t--agg--tt-t-tca-ct-act---tttc-t-----gt-----gttgc-------c-
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27415819 57 -  46296322 ata-ta-agctacc---gag---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tttc-t-----gt-----gtaga-------c-
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26597816 57 +  44709034 ata-ta-agctacc---gag---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tttc-t-----gt-----gtaga-------c-
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    1749 32 -     20114 -------catttcc---gtg---cccaac--------t-tctgcttttg-a-tttt-------------------------------------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_26391               I 1 I 20
s Carlito_syrichta.NW_007259797.1                           274024 38 +    496798 atg-ta-agccTTT---GAG---TCTAAC--------AA---------------CT----------G-C--TT----T--GAG--TT-T-TC-------------------------------------------
i Carlito_syrichta.NW_007259797.1                        C 0 I 10
s Carollia_perspicillata.CarPer_scaffold_107871               3609 57 +      9923 aga-ga-agcttca---gag---tctaac--------ca---------------tt----------t-c--tt----t--agg--ct-t-tta-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31346 22 -     39886 ------------------------------------------------------------------------------------------tca-c----ttcttgtc-t-----gt-----ttagc-------tc
i Castor_canadensis.CasCan_scaffold_39952                I 36 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                     82809 57 -    217609 ata-ta-ggcttct---gaa---tctaac--------ca---------------tt----------t-c--ct----t--gag--tt-t-tta-ttt-ct---tttc-t-----gt-----gtggt-------c-
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4999756 21 +  23392119 -------------------------------------------------------------------------------------------ga-c----ttcttttc-c-----gt-----gtatc-------ct
i Cavia_aperea.AVPZ01000300.1                            I 20 C 0
s Cavia_porcellus.DS562891.1                               5003197 21 +  23407841 -------------------------------------------------------------------------------------------ga-c----ttcttttc-c-----gt-----gtatc-------ct
i Cavia_porcellus.DS562891.1                             I 20 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       66274 21 -     66877 -------------------------------------------------------------------------------------------ga-c----ttcttttc-c-----gt-----gtatc-------ct
i Cavia_tschudii.CavTsc_scaffold_23560                   I 20 C 0
s Cebuella_niveiventris.k141_592277                           6933 60 -     12580 aca-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-tttca-c---------ttc-t-----cttatctgtagc-------ca
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               44991 60 +     53515 aca-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-tttca-c---------ttc-t-----cttatctgtagc-------ca
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  372913 38 -  26074798 aca-ta-agcttcc---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-t--------------------------------------------
i Cebus_albifrons.Contig27                               T 2819 I 2834
s Cebus_olivaceus.k141_1404781                                9801 45 -     34880 aca-ta-agcttcc---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Cebus_olivaceus.k141_1404781                           C 0 I 9
s Cebus_unicolor.k141_1654760                                68897 45 -     89041 aca-ta-agcttcc---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Cebus_unicolor.k141_1654760                            C 0 I 9
s Cephalopachus_bancanus.k141_1140705                         1687 38 -     76265 atg-ta-agccttt---gag---tctaac--------aa---------------ct----------g-c--tt----t--gag--tt-t-tc-------------------------------------------
i Cephalopachus_bancanus.k141_1140705                    C 0 I 10
s Ceratotherium_simum.JH767749.1                          15495139 57 -  27778364 ata-ta-agtttcc---aag---tctaac--------ca---------------tc----------t-c--tt----t--aga--tt-t-tca-ctt-ct---tttc-t-----gt-----atagc-------c-
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          21972 57 +     27315 ata-ta-agtttcc---aag---tctaac--------ca---------------tc----------t-c--tt----t--aga--tt-t-tca-ctt-ct---tttc-t-----gt-----atagc-------c-
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143633 57 -   4669795 --A-TA-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-C--TT----T--GAG-TTT-T-TCA-C----TTATCTTA-T-----GT-----ATAGC-------CA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47372 57 +     47900 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2805 57 -     14410 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----ataac-------ca
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47187 57 -    148725 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29465 57 -     40656 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9424 57 +     20796 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14538 57 -     17524 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30270 57 -     34525 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14048 57 -     25376 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttgtctta-t-----gt-----gtagc-------ca
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366637 57 -  39242232 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272362 57 +  21565898 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttgtctta-t-----gt-----gtagc-------ca
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34729 57 -     45857 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29630 57 -     32606 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5794 54 +      8499 -------agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Cercopithecus_petaurista.k141_42573                    I 1 C 0
s Cercopithecus_pogonias.k141_6079                           28190 57 +     70610 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25152 57 +     36323 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10726 45 -     32913 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Cheracebus_lucifer.k141_2312002                        C 0 I 9
s Cheracebus_lugens.k141_1179667                             21139 45 -     40346 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Cheracebus_lugens.k141_1179667                         C 0 I 9
s Cheracebus_regulus.k141_471822                             21394 45 +    216457 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Cheracebus_regulus.k141_471822                         C 0 I 9
s Cheracebus_torquatus.k141_890198                           21183 45 +     39636 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Cheracebus_torquatus.k141_890198                       C 0 I 9
s Chiropotes_albinasus.k141_1091259                          33168 54 -     52013 gta-ta-agcccct---aag---tgtaac--------ca---------------gt----------g-c--tc----t--ggg-ttt-t-tca-c----t-----ta-c-----ct-----gtagc-------ca
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44266 59 -    112038 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9817 59 +     34062 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346052 57 +  18827391 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12591 57 -     44032 --a-ta-agcccct---aag---tctaac--------ca---------------gc----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307438 57 - 135778131 --A-TA-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-C--TT----T--GAG-TTT-T-TCA-C----TTATCTTA-T-----GT-----GTAGC-------CA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411851 38 -   2368649 --A-TA-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-C--TT----T--GAGTTTT-T-CA-------------------------------------------
i Colobus_angolensis.KN981557.1                          C 0 I 14
s Colobus_guereza.LG01                                      381733 38 - 200372422 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-ca-------------------------------------------
i Colobus_guereza.LG01                                   C 0 I 14
s Colobus_polykomos.k141_906115                               5285 38 -     84244 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-ca-------------------------------------------
i Colobus_polykomos.k141_906115                          C 0 I 14
s Condylura_cristata.JH655891.1                           35810344 57 +  53390261 ata-tc-aactttt---aac---tct------------g---------------tt----------c-c--ct----t--ctg--ct-t-cta-c----t---tttc-t-----gt-----gtcacccttgtgc-
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          5891 57 -      8242 cta-ta-agctttt---gag---tctaac--------ta---------------tt----------t-c--tt----t--agg--tt-t-tcg-ctt-ct---tttc-a-----gt-----gtaat-------c-
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47333 19 -     83289 ------------------------------------------------------------------------------------------cag-c----ttcccatc-t-----gt-----gtgg----------
i Cricetomys_gambianus.CriGam_scaffold_14425             I 226 C 0
s Cricetulus_griseus.LT883664.1                          213118845 19 - 224834208 ------------------------------------------------------------------------------------------cag-c----ttcccatt-c-----at-----gtga----------
i Cricetulus_griseus.LT883664.1                          I 205 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12183 29 +     12657 ------------------------------------------------------------------t-a--tc----t--ggg--tt-t-ttt-g----t---tttc-t-----at-----gtagc-------c-
i Crocidura_indochinensis.CroInd_scaffold_77846          I 24 I 17
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7520 32 +     87169 ------------------------------------------------------------------t-t--at----a--aga--tc-t-tca-ctt-ct---ttcc-t-----gt-----gtgac-------c-
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 25 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    649809 21 -   1526836 -------------------------------------------------------------------------------------------tt-t----tactgtac-t-----gt-----gtagc-------cc
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 20 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22418 32 +     50838 -------aatttct---gtg---tccaac--------t-tctgcttttg-g-ttta-------------------------------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 1 I 21
s Cuniculus_paca.CunPac_flattened_line_7025                  10925 30 +     36344 ---------tttct---gtg---tgcaac--------t-tctgctttgg-g-tttt-------------------------------------------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 21
s Dasyprocta_punctata.DasPun_flattened_line_15900            31349 32 +     75252 -------actttct---gtg---tccaac--------t-tctgcttt-g-agtttt-------------------------------------------------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 1 I 20
s Delphinapterus_leucas.KZ290073.1                        18634881 57 -  35494412 ata-ta-aacttcc---gag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-t-----at-----gtagt-------c-
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11868600 57 -  20541912 att-ga-agcttca---gac---tctaac--------ca---------------tt----------t-c--tt----t--agg--tt-t-tta-ctt-ct---tttc-c-----gt-----gtagt-------c-
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667414 53 -   1390856 ata-ta--gcttcc---aag---tctaac--------ca---------------tc----------t-c--tt----t--aga--tt-t-tca-ct-------tttc-t-----gt-----atagc-------c-
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142212 57 -    198055 ata-ta-agtttcc---aag---tctaac--------ca---------------tc----------t-c--tt----t--aga--tt-t-tca-ctt-ct---tttc-t-----gt-----atagc-------c-
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18954973 34 -  37912305 -------cattttt---ataacttctaac--------tt---------------ct----------g-cttggtgttt---------------------------------------------------------
i Dipodomys_ordii.KN672350.1                             I 230 I 23
s Dipodomys_stephensi.DipSte_scaffold_89095                   9887 34 -     10735 -------CATTTTT---ATAACTTCTAAC--------TT---------------CT----------G-CTTAGTGTTT---------------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 230 I 23
s Dolichotis_patagonum.DolPat_scaffold_80628                 12480 32 +     14636 -------actttct---gtg---ttcaac--------t-tctgcttt-g-agtttt-------------------------------------------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             I 1 I 21
s Eidolon_helvum.AWHC01266696.1                               9252 57 +     19438 ata-ta-aacttct---gag---tttaag--------ca---------------tt----------t-c--tt----t--aga--tt-t-tta-cttt-t---tttc-t-----at-----gtagt-------c-
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       245600 57 -    607251 ata-ta-agctacc---aag---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-cta-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35045 19 +    110024 ------------------------------------------------------------------------------------------CAG-C----TTTGCATA-A-----AT-----GTGA----------
i Ellobius_lutescens.LOEQ01008920.1                      I 225 C 0
s Ellobius_talpinus.LOJH01026522.1                           16974 19 +     18970 ------------------------------------------------------------------------------------------CAG-C----TTTGCATC-A-----AT-----GTGA----------
i Ellobius_talpinus.LOJH01026522.1                       I 226 C 0
s Enhydra_lutris.KZ291758.1                               24925106 67 +  41312741 ata-ta-agcttcc---aac---tctttcc--t-----t---------------tttttttt-tt-t-t--tt----a--agg--tttt-tca-ctt-ct---ttcc-t-----at-----gtggc-------c-
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582436 17 +  14770903 aca-ta-agcttct---gag---tt--------------------------------------------------------------------------------------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3044878 57 -   4378816 ata-ta-agcttcc---aag---tctaac--------cg---------------tt----------t-a--tt----t--agg--tt-g-tca-ctt-ct---tttc-t-----ga-----atagc-------c-
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21378808 57 +  39960074 ata-ta-agcttcc---aag---tctaac--------cg---------------tt----------t-a--tt----t--agg--tt-g-tca-ctt-ct---tttc-t-----ga-----atagc-------c-
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              414790 57 -    498745 ata-ta-agcttcc---aag---tctaac--------cg---------------tt----------t-a--tt----t--agg--tt-g-tca-ctt-ct---tttc-t-----ga-----atagc-------c-
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671115 54 +   7059049 ata-tataatttcc---aaa---gttaac--------ca---------------tt----------c-c--tt----t--ggg--tc-t-tct-c----t---tttttt-----gt-----gaag----------
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265580 57 +  21539334 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74091 57 -    133382 ata-ta-aacttcc---gag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-t-----at-----gtagt-------c-
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              1806 57 +     25849 ata-ta-aacttcc---gag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-t-----at-----gtagt-------c-
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250115 54 - 206538554 ata-ga-agcttaa---aag---tctatc--------ca---------------gt----------t-t--tt----a--aga--tt-t-aca-ct-------ttcc-t-----gt-----gtgac-------t-
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120071 54 - 205367284 ata-ga-agcttaa---aag---tctatc--------ca---------------gt----------t-t--tt----a--aga--tt-t-aca-ct-------ttcc-t-----gt-----gtgac-------t-
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                   713 54 +     25330 ata-ga-agcttaa---aag---tctatc--------ca---------------gt----------t-t--tt----a--aga--tt-t-aca-ct-------ttcc-t-----gt-----gtgac-------t-
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2925712 32 -   3816255 -------agtttct---gtg---tccaat--------t-tctgatttgg-g-tttt-------------------------------------------------------------------------------
i Fukomys_damarensis.KN121974.1                          I 1 I 21
s Galeopterus_variegatus.GalVar_scaffold_51812                4697 34 -     28519 -------------------------------------------------------t----------g-c--tt----t--gca--tt-t-tta-c----ttcttctc-t-----at-----gtagt-------cc
i Galeopterus_variegatus.GalVar_scaffold_51812           I 20 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       1863 57 +    660261 ata-ta-agctatc---aag---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            4777 22 -      6791 ------------------------------------------------------------------------------------------tta-t----ttcttttc-t-----gg-----gtagc-------cc
i Glis_glis.GliGli_scaffold_163929                       I 35 I 8
s Gorilla_beringei.k141_935316                                 682 59 +     34797 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-t--tt----t--gag-att-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Gorilla_beringei.k141_935316                           I 8 C 0
s Gorilla_gorilla.LT578336.1                                 75271 59 +  33314783 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-t--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Gorilla_gorilla.LT578336.1                             I 57 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    6653 21 -     78134 ------------------------------------------------------------------------------------------tta-t----tt-ttttc-t-----gg-----gtagc-------cc
i Graphiurus_murinus.GraMur_scaffold_10447               I 36 I 8
s Helogale_parvula.HelPar_flattened_line_2585                33899 57 -    327341 ata-ga-agcttcc---aag---tctatc--------ca---------------tt----------t-t--gt----g--aga--tc-t-tca-ctt-ct---ttcc-t-----gt-----gtgat-------c-
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15530 57 +     48891 ata-ta-agctacc---gag---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tttc-t-----gt-----ataga-------c-
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938153 32 -  22651954 -------agtttct---gcg---tccaat--------t-tctgctttgg-g-tttt-------------------------------------------------------------------------------
i Heterocephalus_glaber.JH602082.1                       I 1 I 21
s Hippopotamus_amphibius.HipAmp_scaffold_38803               10918 57 -     36432 ata-ta-agcttcc---tag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1555962 57 -   1711038 ata-ta-agctttt---gtg---tctaac--------ca---------------tt----------t-c--tt----g--agg--tt-t-tca-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_363447                331 57 +       852 ata-ta-agctttt---gtg---tctaac--------ca---------------tt----------t-c--tt----g--agg--tt-t-tca-ctt-ct---tttc-t-----gt-----atagt-------c-
i Hipposideros_galeritus.HipGal_scaffold_363447          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145246 39 -    630532 ata-ta-agcccct---agg---tctaac--------ca---------------gt----------g-t--tt----t--gag-ttt-t-tc-------------------------------------------
i Hoolock_leuconedys.ctg274                                 C 0 I 15
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73531 57 +     83186 ata-aa-agcttcc---aag---tctata--------ta---------------tt----------t-t--gg----a--aga--tt-t-tca-ctt-ct---ttcc-t-----gt-----gtgac-------c-
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75087 32 +    143317 -------actgtct---gtg---tccaac--------t-gctgcttt-g-agtttt-------------------------------------------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 1 I 21
s Hylobates_agilis.k141_1155965                               8292 39 +     12352 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-t--tt----t--gag-ttt-t-tc-------------------------------------------
i Hylobates_agilis.k141_1155965                          C 0 I 15
s Hylobates_klossii.k141_738755                              15479 39 +     55766 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-t--tt----t--gag-ttt-t-tc-------------------------------------------
i Hylobates_klossii.k141_738755                          C 0 I 15
s Hylobates_pileatus_b.LG02                                       2055007 39 + 191637585 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-t--tt----t--gag-ttt-t-tc-------------------------------------------
i Hylobates_pileatus_b.LG02                                     C 0 I 15
s Hylobates_pileatus_a.tarseq_633                            7803885 39 +  11177569 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-t--tt----t--gag-ttt-t-tc-------------------------------------------
i Hylobates_pileatus_a.tarseq_633                          C 0 I 15
s Ictidomys_tridecemlineatus.JH393364.1                     390213 23 +   7955117 ------------------------------------------------------------------------------------------ttaat----ctcttttc-t-----gg-----gtagt-------ta
i Ictidomys_tridecemlineatus.JH393364.1                  I 32 I 2
s Hystrix_cristata.HysCri_scaffold_5660                      10934 31 -    135385 -------tgtttct---gca---tccaac--------t-tct-atttag-g-tttt-------------------------------------------------------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  I 1 I 21
s Inia_geoffrensis.IniGeo_flattened_line_69447               12985 57 -     16823 ata-ta-aacttcc---gag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-t-----at-----atagt-------c-
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 74825 57 -     97402 ata-ta-aacttct---gag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-t-----at-----gtagt-------c-
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45092 59 +    110728 ata-ta-aacccct---aag---tctaac--------ca---------------gt----------g-c--ct----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    35853 17 -     49555 aca-ta-agcttct---gag---tt--------------------------------------------------------------------------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_26245                C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                         573 54 -     23187 ata-ta-agcccct---aag---tgtaac--------ca---------------ga----------g-c--tt----t--ggg-ttt-t-tca-c---------tta-c-----ct-----gtagc-------ca
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            886 54 -     14280 ata-ta-agcccct---aag---tgtaac--------ca---------------ga----------g-c--tt----t--ggg-ttt-t-tca-c---------tta-c-----ct-----gtagc-------ca
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         529 54 +      3713 ata-ta-agcccct---aag---tataac--------ca---------------ga----------g-c--tt----t--ggg-ttt-t-tca-c---------tta-c-----ct-----gtagc-------ca
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      720 54 +      8855 ata-ta-agcctct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gga-ttt-t-tca-c---------ttc-t-----tt-----gtagc-------ca
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5522 54 -     13645 ata-ta-agcctct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gga-ttt-t-tca-c---------ttc-t-----tt-----gtagc-------ca
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816406 66 -   3914936 gta-ta-agcttcc---aag---tctatcc-at--tttt---------------tttttt------t-t--tt----t--agg--tt-t-tca-ctt-ct---ttcc-t-----gt-----gtggc-------c-
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     21617 55 +     24238 aaa-ta-cactgtt---gtg---tctaaa--------ct---------------tt----------g-c--tt----t--aga--ct-t-caa-t----t---tttc-a-----gt-----ttagt-------cc
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 12
s Lipotes_vexillifer.KE559953.1                             344167 57 +    662738 ata-ta-aacttcc---aag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-t-----at-----gtagt-------c-
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336515 57 -   1826925 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                41617825 59 +  59628241 ata-ta-agcttcc---aag---tct-----------tt---------------ttttttt-----t-t--tt----t--agg--tt-t-tca-ct-act---tttc-t-----gt-----gttgc-------c-
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              47907 57 -     61512 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375569 57 -  60120075 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27837 57 +     30207 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2675 57 -      5035 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27790 57 +     30527 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------aa
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 38966 57 -     50087 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48711 57 +     51645 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417913 57 - 187317192 --A-TA-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-C--TT----T--GAG-TTT-T-TCA-C----TTATCTTA-T-----GT-----ATAGC-------CA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402144 57 +  25927173 --A-TA-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-C--TT----T--GAG-TTT-T-TCA-C----TTATCTTA-T-----GT-----ATAGC-------CA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51315 57 -     62418 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3846 57 +     14901 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47788 57 +     59329 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273695 57 +    668171 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2327 57 -      5049 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5493 57 +     17132 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226185 58 -    270270 ata-ta-aacttct---gag---ttgaag--------ca---------------tt----------t-c--tt----t--aga--tt-t-tta-ctttct---tttc-t-----gt-----gtagt-------c-
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        324983 57 +  24302211 --a-ta-aacccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359814 57 -    752769 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676465 55 -    737560 ata-tg-t--gtct---gag---tctaac--------ca---------------tt----------t-c--tt----t--aag--tt-t-tca-ttt-ct---tttc-t-----gt-----gtaac-------c-
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             223762 55 +    317179 ata-tg-t--gtct---gag---tctaac--------ca---------------tt----------t-c--tt----t--agg--tt-t-tca-ttt-ct---tttc-t-----gt-----gtaac-------c-
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504443 23 +  40650429 ------------------------------------------------------------------------------------------ttaac----ctcttttc-t-----gg-----gtaat-------ta
i Marmota_marmota.CZRN01000018.1                         I 20 I 2
s Megaderma_lyra.MegLyr_scaffold_4542                       153588 57 +    207569 ata-ta-agctttt---gag---tctaac--------ca---------------tt----------t-c--tt----t--aga--tt-t-tca-ctt-at---tttg-t-----at-----gtagt-------c-
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29195 30 -     74585 -----------------------------------------------------------------------tt----a---gg--tttt-tta-ctt-ct---ttcc-t-----at-----gtggc-------c-
i Mellivora_capensis.MelCap_flattened_line_19308         I 28 C 0
s Mesocricetus_auratus.KB708134.1                         17432686 19 +  29670104 ------------------------------------------------------------------------------------------AAG-C----TTCCCAGc-c-----at-----gtga----------
i Mesocricetus_auratus.KB708134.1                        I 197 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90451 57 +     93471 ata-ta-aacttcc---gag---tcaaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12116 58 +     17804 aca-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-tttca-c---------ttc-t-----c--atctgtagc-------ca
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12616 58 -     12984 aca-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-tttca-c---------ttc-t-----c--atctgtagc-------ca
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20935 58 -     26561 aca-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-tttca-c---------ttc-t-----c--atctgtagc-------ca
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188181 57 +    200668 gca-ga-agcttaa---aag---tctgac--------ca---------------tt----------t-c--tt----t--agg--tt-t-tta-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966460 19 +  27267610 ------------------------------------------------------------------------------------------CAG-C----TTTGCATC-A-----AT-----GTGA----------
i Microtus_ochrogaster.CM001695.1                        I 226 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368012 57 -   8254450 ata-ta-aatttct---gag---tctaac--------ca---------------tt----------t-c--tt----t--agg--gt-t-tca-ctt-at---tttc-t-----gt-----gtagt-------c-
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             45743 57 -     48117 ata-ta-aatttct---gag---tctaac--------ca---------------tt----------t-c--tt----t--agg--gt-t-tca-ctt-at---tttc-t-----gt-----gtagt-------c-
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25079 55 -     27822 -----A-AGCTCCT---AAG---tctaac--------cg---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11636 69 +     27589 gta-ta-agcttcc---aag---tctatcc-at--tttt---------------tttttttt-t--t-t--tt----t--agg--tt-t-tca-ctt-ct---ttcc-t-----gt-----gtggc-------c-
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362559 57 +    437263 ata-ta-aacttcc---gag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-t-----at-----gtagt-------c-
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182597 57 +    366855 ata-aa-agcttca---tag---tctaac--------ca---------------tt----------t-c--tt----t--agg--tt-t-tta-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  31761 57 -     82753 ata-ta-agctacc---gag---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tttc-t-----tt-----gtaga-------c-
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21648 57 -     63510 ata-ga-agcttcc---aag---tctatc--------ca---------------tt----------t-t--gt----a--aga--tc-t-tca-ctt-ct---ttcc-t-----gt-----gtgat-------c-
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          44986 57 +     47283 aca-ta-agcttct---ggg---tctaac--------ca---------------tt----------t-c--ct----t--agg--gt-t-tca-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35597654 19 + 120012414 ------------------------------------------------------------------------------------------Gag-c----gtcccatc-t-----at-----gtga----------
i Mus_caroli.LT608237.1                                  I 239 C 0
s Mus_musculus.chr8                                       41691194 19 + 129401213 ------------------------------------------------------------------------------------------Gag-c----atcccatc-g-----at-----gtga----------
i Mus_musculus.chr8                                      I 235 C 0
s Mus_pahari.LT608297.1                                   58219156 19 +  89631738 ------------------------------------------------------------------------------------------Gag-c----atcccatc-t-----at-----gtga----------
i Mus_pahari.LT608297.1                                  I 237 C 0
s Mus_spretus.CM004101.1                                  39500113 19 + 130317789 ------------------------------------------------------------------------------------------Gag-c----atcccatc-g-----at-----gtga----------
i Mus_spretus.CM004101.1                                 I 234 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               2777 22 -    124358 ------------------------------------------------------------------------------------------tta-c----ttcttttg-t-----gg-----gtagc-------cc
i Muscardinus_avellanarius.MusAve_scaffold_5560          I 36 I 2
s Mustela_putorius.JH418006.1                             14358031 69 +  14710649 ata-ta-agcttcc---aac---tctttcc--t-----t---------------ttttttttatttt-t--tt----a--aag--tttt-tca-ctt-ct---ttcc-t-----at-----gtggc-------c-
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                       813 32 -     27262 -------gatttct---gta---tccaac--------t-tctgattttg-g-tttt-------------------------------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_57531                 I 1 I 21
s Myotis_brandtii.KE162005.1                               9796994 57 +  10118263 aca-ta-agcttct---gag---tctagc--------ca---------------tt----------t-c--tt----t--agg--gt-t-tca-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391169 57 +   6019432 aca-ta-agcttct---gag---tttagc--------ca---------------tt----------t-c--tt----t--agg--gt-t-tca-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387207 57 +   4330536 aca-ta-agcttct---gag---tctagc--------ca---------------tt----------t-c--tt----t--agg--gt-t-tca-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         5994 57 +     18357 aca-ta-agcttct---gag---tctagc--------ca---------------tt----------t-c--tt----t--agg--gt-t-tca-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950064 19 +   3037898 ------------------------------------------------------------------------------------------CAG-C----ttcccatc-c-----ct-----gtga----------
i Nannospalax_galili.KL204047.1                          I 1021 C 0
s Nasalis_larvatus.k141_1350636                              31860 58 +     34575 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469085 67 -  31847680 gta-ta-agcttcc---aag---tctatcc-at--tttt---------------ttttttt-----t-t--tt----t--agg--tt-t-tca-ctt-ct---ttcc-t-----gt-----gtggc-------a-
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235225 57 -   7148211 ata-ta-aacttcc---gag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-t-----at-----gtagt-------c-
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   130931 35 -    149072 ata-ta-agcttca---gcg---tctaac--------ca---------------tt----------t-c--tt----t--agg--tt------------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 20
s Nomascus_annamensis.k141_1771965                           56180 39 -    132029 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-t--tt----t--gag-ttt-t-tc-------------------------------------------
i Nomascus_annamensis.k141_1771965                       C 0 I 15
s Nomascus_concolor.k141_735679                              12275 39 -     16345 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-t--tt----t--gag-ttt-t-tc-------------------------------------------
i Nomascus_concolor.k141_735679                          C 0 I 15
s Nomascus_gabriellae.k141_57920                             18164 39 +     22201 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-t--tt----t--gag-ttt-t-tc-------------------------------------------
i Nomascus_gabriellae.k141_57920                         C 0 I 15
s Nomascus_siki_b.tarseq_93                            8416394 39 -  22158432 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-t--tt----t--gag-ttt-t-tc-------------------------------------------
i Nomascus_siki_b.tarseq_93                          C 0 I 15
s Nomascus_siki_a.k141_941534                                  28569 39 -     54323 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-t--tt----t--gag-ttt-t-tc-------------------------------------------
i Nomascus_siki_a.k141_941534                              C 0 I 15
s Nyctereutes_procyonoides.CAJHUB010000658.1                201527 61 +   9404916 ata-ta-agcttcc---aag---tct-----------tt---------------ttttttt-----t-t--tt----tttagg--tt-t-tca-ct-act---tttc-t-----gt-----gttgc-------c-
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059077 32 -  11899542 -------aatttct---gtg---tccaac--------t-tctgcttttg-g-ttta-------------------------------------------------------------------------------
i Octodon_degus.JH651603.1                               I 1 I 21
s Odobenus_rosmarus.KB229312.1                             1454856 65 +   2017862 gta-ta-aacttcc---aag---tctatcc--t-ttttg---------------t-tttt------t-t--tt----t--agg--tt-t-tca-cttt-t---ttcc-t-----gt-----gtggc-------c-
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442154 57 -    630418 ata-ta-agctacc---aag---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tttc-t-----gt-----atagt-------c-
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          21814 57 +    150152 ata-ta-agctatc---aag---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97077 18 -    140218 ------------------------------------------------------------------------------------------cag-c----t-tgcatc-a-----at-----gtga----------
i Ondatra_zibethicus.OndZib_scaffold_7387                I 224 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7615 19 -     41509 ------------------------------------------------------------------------------------------cag-c----tttccatt-c-----at-----gtga----------
i Onychomys_torridus.OnyTor_scaffold_28377               I 189 C 0
s Orcinus_orca.KB316932.1                                  8105629 57 +  10937097 ata-ta-aacttcc---aag---tctaat--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-t-----at-----gtagt-------c-
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108278 55 - 174332312 aaa-ta-cactgtt---gtg---tctaaa--------ct---------------tt----------g-g--tt----t--aga--ct-t-caa-t----t---tttc-a-----gt-----ttagt-------cc
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 12
s Otocyon_megalotis.JAEUCK010005147.1                        42485 31 +    559221 ata-ta-agcttcc---aag---tct-----------tt---------------ttttttt-----t-t--tt--------------------------------------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 27
s Ovis_aries.CM001607.2                                   26410556 57 -  44047080 ata-ta-agctacc---gag---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tttc-t-----gt-----ataga-------c-
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11179 57 +     17875 ata-ta-agctacc---gag---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tttc-t-----gt-----ataga-------c-
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02004363.1                                  170 59 +      1263 ATA-TA-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-T--TT----T--GAG-TTT-T-TCA-C----TTATCTTA-T-----GT-----GTAGC-------CA
i Pan_paniscus.AJFE02004363.1                            I 8 I 83
s Pan_troglodytes.KZ622849.1                                 37525 59 -    110857 ATA-TA-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-T--TT----T--GAG-TTT-T-TCA-C----TTATCTTA-T-----GT-----GTAGC-------CA
i Pan_troglodytes.KZ622849.1                             I 138 I 375
s Panthera_onca.PanOnc_flattened_line_3271                   28117 54 -    230217 ata-ga-agtttac---aag---tctatc--------ca---------------gt----------t-t--tt----a--aga--tt-t-tca-ct-------ttcc-t-----gt-----gtgac-------t-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465349 54 -  18783137 ata-ga-agtttac---aag---tctatc--------ca---------------gt----------t-t--tt----a--aga--tt-t-tca-ct-------ttcc-t-----gt-----gtgac-------t-
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3975950 54 +   8748460 ata-ga-agcttac---aag---tctatc--------ca---------------gt----------t-t--tt----a--aga--tt-t-tca-ct-------ttcc-t-----gt-----gtgac-------t-
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622074 57 +   2937107 ata-ta-agctact---gag---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tttc-t-----gt-----gtaga-------c-
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   245992 57 - 183742232 --A-TA-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-C--TT----T--GAG-TTT-T-TCA-C----TTATCTTA-T-----GT-----ATAGC-------CA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12277 57 +     21308 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295020 57 -  20919399 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24917 57 -     27687 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1596 57 +     10553 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1556 57 -     10386 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----atagc-------ca
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18289 53 +     78924 ata-ga-agcttcc---aa-------atc--------ca---------------tt----------t-t--at----a--agc--tt-t-tca-ctt-ct---ttcc-t-----gt-----gtggc-------c-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         250835 19 +  18517816 ------------------------------------------------------------------------------------------CAG-A----TTTCCATC-C-----AT-----GTGA----------
i Peromyscus_maniculatus.KI615324.1                      I 195 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35200 21 -     56120 -------------------------------------------------------------------------------------------ca-c----tacttttc-t-----gt-----gtagc-------cc
i Petromus_typicus.PetTyp_scaffold_17301                 I 32 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7184 31 +      9367 -------CATTTTC---ATG---TCTAAA--------CT---------------CG----------A-CTTCGTGTTT---------------------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_89005   I 225 I 12
s Phocoena_phocoena.PhoPho_flattened_line_24159               7151 57 -     63832 ata-ta-aacttcc---gag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-t-----at-----gtagc-------c-
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5238 58 +     55023 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4760 58 -     89929 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5350 58 +     40849 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257080 58 +  14605196 --A-TA-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-C--TT----T--GAGTTTT-T-TCA-C----TTATCTTA-T-----GT-----GTAGC-------CA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7544 17 +     22231 aca-ta-agcttct---gag---tt--------------------------------------------------------------------------------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66622 54 +    207309 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----t-----ta-t-----ct-----gtagc-------ca
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7710 59 -     25401 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33458 59 +     58159 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33734 59 +     63561 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33494 54 +     51148 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----t-----ta-t-----ct-----gtagc-------ca
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558464 59 -   4542175 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtagc-------ca
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33478 54 +     51125 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----t-----ta-t-----ct-----gtagc-------ca
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4172 57 +     19503 ata-ta-aacttcc---gag---tctaac--------ca---------------tt----------t-c--tt----t--gaa--tt-t-tta-ctt-ct---tttc-t-----at-----gtagt-------c-
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                        9895 59 +     39866 ata-ta-agcccct---aag---tctaac--------ca---------------ga----------g-c--tc----t--ggg-ttt-t-tca-c----ttgtctta-t-----ct-----gtagc-------ca
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          4977 59 -      9282 ata-ta-agcccct---aag---tctaac--------ca---------------ga----------g-c--tc----t--ggg-ttt-t-tca-c----ttgtctta-t-----ct-----gtagc-------ca
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44381 59 -     87950 ata-ta-aacccct---aag---tctaac--------ca---------------ga----------g-c--tc----t--ggg-ttt-t-tca-c----ttgtctta-t-----ct-----gtagc-------ca
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44775 59 -     88961 ata-ta-agcccct---aag---tctaac--------ca---------------ga----------g-c--tc----t--ggg-ttt-t-tca-c----ttgtctta-t-----ct-----gtagc-------ca
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9473 59 -     39403 ata-ta-agcccct---aag---tctaac--------ca---------------ga----------g-c--tc----t--ggg-ttt-t-tca-c----ttgtctta-t-----ct-----gtagc-------ca
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44424 59 +     87928 ata-ta-agcccct---aag---tctaac--------ca---------------ga----------g-c--tc----t--ggg-ttt-t-tca-c----ttgtctta-t-----ct-----gtagc-------ca
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9472 59 -     60166 ata-ta-agcccct---aag---tctaac--------ca---------------ga----------g-c--tc----t--ggg-ttt-t-tca-c----ttgtctta-t-----ct-----gtagc-------ca
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16393 59 -     67232 ata-ta-agcccct---aag---tctaac--------ca---------------ga----------g-c--tc----t--ggg-ttt-t-tca-c----ttgtctta-t-----ct-----gtagc-------ca
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44325 59 -     90634 ata-ta-agcccct---aag---tctaac--------ca---------------ga----------g-c--tc----t--ggg-ttt-t-tca-c----ttgtctta-t-----ct-----gtagc-------ca
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45792 59 +     89403 ata-ta-agcccct---aag---tctaac--------ca---------------ga----------g-c--tc----t--ggg-ttt-t-tca-c----ttgtctta-t-----ct-----gtagc-------ca
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181936 59 - 189387572 ATA-TA-AGCCCCT---AAG---TCTAAC--------CG---------------GT----------G-T--AT----T--GAG-TTT-T-TCA-C----TTATCTTA-T-----GT-----GTGGC-------CA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196679 59 -   9816681 ata-ta-agcccct---aag---tctaac--------cg---------------gt----------g-t--at----t--gag-ttt-t-tca-c----ttatctta-t-----gt-----gtggc-------ca
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30440 58 +     69807 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47621 58 -     80239 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55266 57 -     66298 ata-ga-agctgca---gag---tctaac--------ca---------------tt----------t-t--tt----t--agg--tt-t-tta-ct-act---tttc-t-----gt-----gtagt-------c-
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7646 64 -     18639 ata-ta-agcttcc---aac---tctttcc--t-----t---------------ttttttt-----t-t--tt----a--agg--tttt-tta-ctt-ct---ttcc-t-----at-----gtggc-------t-
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5843804 57 -  28871421 ata-ta-aacttct---gag---tttaag--------ca---------------tt----------t-c--tt----t--aga--at-t-tta-cttt-t---tttc-t-----gt-----gtagt-------c-
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540320 57 -   4952924 ata-ta-aacttct---gag---tttaag--------ca---------------tt----------t-c--tt----t--aga--at-t-tta-cttt-t---tttc-t-----gt-----gtagt-------c-
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102338 54 +  38429054 ata-ga-agcttac---aag---tctatc--------ca---------------gt----------g-t--tt----a--aga--tt-t-tca-ct-------ttcc-t-----gt-----gtgac-------t-
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29807 58 +     91421 --a-ga-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156359 58 -   7812017 --a-ga-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10659 58 +     72585 --a-ga-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4675 57 -     55207 ata-ta-agctacc---aag---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tttc-t-----gt-----atagt-------c-
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37025776 17 -  90668790 ------------------------------------------------------------------------------------------Gag-c----ttcccatc-t-----at-------ga----------
i Rattus_norvegicus.chr16                                I 227 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2917730 56 +   3329780 ata-ta--gctttt---gtg---tctaac--------ca---------------tt----------t-c--tt----t--agg--tt-t-tca-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4265 58 +      7119 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124935 58 + 195417433 --A-TA-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-C--TT----T--GAGTTTT-T-TCA-C----TTATCTTA-T-----GT-----GTAGC-------CA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239107 58 -   7961872 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78298 57 -    116970 ata-ta-aacttct---gag---tttaag--------ca---------------tg----------t-c--tt----t--aga--tt-t-tta-cttt-t---tttc-t-----gt-----gtagt-------c-
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9064 54 +     12412 gta-ta-agcccct---aag---tgtaac--------ca---------------gt----------g-c--tc----t--ggg-ttt-t-tca-c---------tta-c-----ct-----gtagc-------ca
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               525 54 +      9876 gta-ta-agcccct---aag---tgtaac--------ca---------------gt----------g-c--tc----t--ggg-ttt-t-tca-c---------tta-c-----ct-----gtagc-------ca
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16128 54 -     24931 GTA-TG-ATCCCCT---AAG---TGTAAC--------CA---------------GT----------G-C--TC----T--GGG-TTT-T-TCA-C---------TTA-C-----CT-----GTAGC-------CA
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1008 54 +      4564 GTA-TG-ATCCCCT---AAG---TGtaac--------ca---------------gt----------g-c--tc----t--ggg-ttt-t-tca-c---------tta-c-----ct-----gtagc-------ca
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3813 54 -      7443 GTA-TG-ATCCCCT---AAG---TGtaac--------ca---------------gt----------g-c--tc----t--ggg-ttt-t-tca-c---------tta-c-----ct-----gtagc-------ca
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394718 54 - 209938924 gta-ta-agcccct---aag---tgtaac--------ca---------------gt----------g-c--tc----t--ggg-ttt-t-tca-c---------tta-c-----ct-----gtagc-------ca
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1428 54 +     10149 GTA-TG-ATCCCCT---AAG---TGtaac--------ca---------------gt----------g-c--tc----t--ggg-ttt-t-tca-c---------tta-c-----ct-----gtagc-------ca
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                768 54 +     10417 gta-ta-agcccct---aag---tgtaac--------ca---------------gt----------g-c--tc----t--ggg-ttt-t-tca-c---------tta-c-----ct-----gtagc-------ca
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14126 57 +     16473 ata-ta-agctacc---gag---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tttc-t-----gt-----ataga-------c-
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110892 59 + 121099817 CTA-TC-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-C--TT----T--GGG-TTT-T-TCA-C----TTATCTTA-T-----CT-----GTAAC-------CA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32459 59 -     47369 cta-tc-agcctct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtaac-------ca
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32845 59 -     79414 CTA-TC-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-C--TT----T--GAG-TTT-T-TCA-C----TTATCTTA-T-----CT-----GTAAC-------CA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29536 59 -     34454 CTA-TC-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-C--TT----T--GAG-TTT-T-TCA-C----TTATCTTA-T-----CT-----GTAAC-------CA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16937 59 -     22428 CTA-TC-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-C--TT----T--GAG-TTT-T-TCA-C----TTATCTTA-T-----CT-----GTAAC-------CA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32091 59 -     47109 cta-tc-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttatctta-t-----ct-----gtaac-------ca
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240121 45 +   5703754 aca-ta-ggcttct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Sapajus_apella.ctg103                                  C 0 I 9
s Sapajus_macrocephalus.k141_796559                           9711 45 +     21866 aca-ta-ggcttct---aag---tctaac--------ca---------------gt----------g-c--tt----t--ggg-ttt-t-tca-c----ttat--------------------------------
i Sapajus_macrocephalus.k141_796559                      C 0 I 9
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122144 60 +    313613 tta-tc-agatttt---gac---tctaat---------g---------------tt----------t-c--at----t--ctg--tt-t-tta-c----t---tttc-t-----tt-----gtaaccctcatgc-
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1246 58 +     11297 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31639 58 +     58920 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18137 58 -     45317 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tc----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25795 58 -     42441 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28471 58 -     29113 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31548 58 -     48123 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52620 19 +     77746 ------------------------------------------------------------------------------------------caa-t----ttcccatt-c-----at-----atga----------
i Sigmodon_hispidus.SigHis_scaffold_20193                I 204 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1866966 27 -   1910179 -----------------------------------------------------------------------ac----t--tag--tt-t-tca-c----t---ttta-t-----at-----gtagt-------c-
i Solenodon_paradoxus.SolPar_flattened_line_126          I 24 C 0
s Sorex_araneus.JH798187.1                                 4674158 52 +  18376816 ata-ta-attttcc---aag---tgtagc--------ca---------------tt----------t-g--t-----t---gg--gt-t-tca-t----t---tttc-t-----at-----gtagt-------c-
i Sorex_araneus.JH798187.1                               C 0 I 11
s Spermophilus_dauricus.KZ294078.1                         1871750 27 +   3870691 -------aatttct---ct----tctgac--------ct---------------ct----------g-c--ttgat-t---------------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       I 2 I 31
s Spilogale_gracilis.SpiGra_flattened_line_13525             15853 73 -     97271 ata-ta-agctttccttaaa---tctatcccctcaattt---------------ttttttt-----t-t--tt----t--agg--tt-t-tca-ctt-ct---ttcc-t-----at-----gtggc-------c-
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128496 57 +    196729 ata-ga-agcttcc---aag---tctatc--------ca---------------tt----------t-t--gt----a--aga--tc-t-tca-ctt-ct---ttcc-t-----gt-----gtgac-------c-
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6647755 57 +  69701581 ata-ta-ggcttct---gag---tctaac--------aa---------------tt----------t-c--ct----t--gag--tt-t-ttg-ttt-ct---tttc-t-----gt-----gtagt-------c-
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393651 39 +   1523678 ata-ta-agcccct---aag---tctaac--------ca---------------gt----------g-t--tt----t--gag-ttt-t-tc-------------------------------------------
i Symphalangus_syndactylus.tarseq_199                    C 0 I 15
s Tadarida_brasiliensis.TadBra_scaffold_54991                17217 57 +     22964 ata-ta-agcttct---gag---tctaac--------ca---------------tt----------t-c--tt----t--agg--at-t-tca-ttt-ct---tttc-t-----gt-----gtagt-------c-
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194596 57 +    199430 ata-ta-agcttca---gag---tctaac--------ca---------------cc----------t-c--tt----t--agg--tt-t-tca-ctt-ct---tttc-t-----gt-----atagc-------c-
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108576 57 -    539355 ata-ta-agcttca---gag---tctaac--------ca---------------cc----------t-c--tt----t--agg--tt-t-tca-ctt-ct---tttc-t-----gt-----atagc-------c-
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4215 38 +      9917 atg-ta-agtcctt---gag---tctaac--------aa---------------ct----------g-c--tt----t--gag--tt-t-tc-------------------------------------------
i Tarsius_lariang.k141_1733899                           C 0 I 10
s Tarsius_wallacei.k141_226975                               11011 38 +     20590 atg-ta-agtcctt---gag---tctaac--------aa---------------ct----------g-c--tt----t--gag--tt-t-tc-------------------------------------------
i Tarsius_wallacei.k141_226975                           C 0 I 10
s Theropithecus_gelada.CM009954.1                           355801 57 - 186847797 --A-TA-AGCCCCT---AAG---TCTAAC--------CA---------------GT----------G-C--TT----T--GAG-TTT-T-TCA-C----TTATCTTA-T-----GT-----ATAGC-------CA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27480 21 -     33621 -------------------------------------------------------------------------------------------ca-c----ttcttttc-t-----gt-----gtagc-------cc
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 30 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483524 57 -    610378 ata-ga-agcttca---gag---tctaac--------ca---------------tt----------t-c--tt----t--agg--tt-t-tta-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23547 58 +     26378 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36346 58 -     78344 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22872 58 +     25722 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31302 58 -     62838 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31293 58 +     46913 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12030 58 -     28527 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33237 58 -     64340 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31275 58 -     63452 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12722 58 +     22490 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          688 58 +      9911 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          483 58 -     33539 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258242 58 -   6242583 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4261 58 +     19340 --a-ta-agcccct---aag---tctaac--------ca---------------gt----------g-c--tt----t--gagtttt-t-tca-c----ttatctta-t-----gt-----gtagc-------ca
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177384 57 -    200418 ata-ta-tgttact---gaa---tctaac--------ca---------------tt----------c-c--tt----g--gag--gt-t-tta-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839157 57 -   4065304 atc-ta-aggttct---gag---tctaac--------tt---------------ct----------a-c--tt----c--gtg--tt-t-tcg-c----ttcttttt-t-----at-----ttagt-------c-
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13249 57 -     70247 atc-ta-aggttct---gag---tctaac--------tg---------------ct----------a-c--tt----t--atg--tt-t-ttg-c----ttcttttt-t-----at-----ttagt-------c-
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17368754 57 -  33153633 ata-ta-aacttct---gag---tctaat--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-c-----at-----gtagt-------c-
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7019 28 -     21056 ----------------------------------------------------------------------------------g--tt-t-tca-c----t---attc-t-----g------gtagccctcatgc-
i Uropsilus_gracilis.UroGra_scaffold_46687               I 27 C 0
s Ursus_maritimus.KK499267.1                                185089 35 +   5085361 -------------------------------------------------------cattt--a---t-t--at----t--a-----t-t-tca-ctt-ct---ttcc-t-----gt-----gtggc-------c-
i Ursus_maritimus.KK499267.1                             I 21 C 0
s Vicugna_pacos.KN270157.1                                   79279 57 +   5488506 aaa-ta-agcttct---gag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tca-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108421 61 -    112863 ata-ta-agcttcc---aag---tct-----------tt---------------ttttttt-----t-t--tt----tttagg--tt-t-tca-ct-act---tttc-t-----gt-----gttgc-------c-
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        177665 23 -    224448 ------------------------------------------------------------------------------------------ttaat----ctcttgac-t-----gg-----gtagt-------ta
i Xerus_inauris.XerIna_scaffold_2302                     I 32 I 2
s Zalophus_californianus.ZalCal_flattened_line_17732         32060 68 -     86975 gta-ta-agcttcc---aag---tctatcc--t-ttttt---------------tttttttt----t-t--tt----t--agg--tt-t-tca-ctt-ct---ttcc-t-----gt-----gtggc-------c-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       3892 22 -     63895 ------------------------------------------------------------------------------------------aaa-t----ttcttttc-t-----gt-----gtagt-------tc
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 32 I 11
s Ziphius_cavirostris.ZipCav_flattened_line_334639             715 57 +      3447 ata-ta-aacttcc---aag---tctaac--------ca---------------tt----------t-c--tt----t--gag--tt-t-tta-ctt-ct---tttc-t-----gt-----gtagt-------c-
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_510450               1901 278 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    49396 73 +    145209 I
e Echinops_telfairi.JH980293.1                            62858214 80 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               2589 223 +     11607 I
e Elephantulus_edwardii.JH947257.1                         9113279 68 -  10337057 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            609346 87 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                 1866 90 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   22296 79 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2112554 81 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            15196 81 -     19938 I
e Trichechus_manatus.JH594705.1                            6485301 82 -  10818551 I
e Psammomys_obesus.NESX01036366.1                            40656  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_128773                 2495 82 -     12774 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53122  0 -    140813 C
e Loxodonta_africana.GL010049.1                           39087697 84 +  43346337 I
e Jaculus_jaculus.JH725527.1                               1242424 337 +   9596543 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                5963 82 +      8654 I
e Allactaga_bullata.AllBul_scaffold_20030                    20875 333 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28723  2 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9660 23 +     36723 GCA--CGC---------A---------------TGTAAC-AT-G-A-AAACA--T
s Acinonyx_jubatus.LLWD01001279.1                           816166 25 +   1699592 -------ccgatg-c--a---------------tacaaa-at-taa-aaaca--t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418668 25 +  29979442 -------cccatg-c--a---------------agtaca-at-tca-aaaca--t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            218671 24 +    347723 -------cc-ata-c--a---------------tgtaaa-at-gta-aaaca--t
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50607 23 +     53615 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2634 23 +     13857 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19189 23 -     21945 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20874 23 +     32033 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74130 23 -     84148 cca--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Alouatta_belzebul.k141_1011583                         I 9 C 0
s Alouatta_caraya.k141_1109140                               46368 23 -     78289 cca--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Alouatta_caraya.k141_1109140                           I 9 C 0
s Alouatta_discolor.k141_2561099                             45795 23 +     55831 cca--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Alouatta_discolor.k141_2561099                         I 9 C 0
s Alouatta_juara.k141_1687208                                44258 23 -     64179 cca--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Alouatta_juara.k141_1687208                            I 9 C 0
s Alouatta_macconnelli.k141_1277969                           1366 23 -      3959 cca--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Alouatta_macconnelli.k141_1277969                      I 9 C 0
s Alouatta_nigerrima.k141_376068                             42883 23 +     45454 cca--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Alouatta_nigerrima.k141_376068                         I 9 C 0
s Alouatta_palliata.k141_638677                              48532 23 +     70886 cca--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Alouatta_palliata.k141_638677                          I 9 C 0
s Alouatta_puruensis.k141_251022                             10705 23 +     30854 cca--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Alouatta_puruensis.k141_251022                         I 9 C 0
s Alouatta_seniculus.k141_928287                             34839 23 +     42133 cca--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Alouatta_seniculus.k141_928287                         I 9 C 0
s Ammotragus_lervia.NIVO01071767.1                         1591873 24 +   2318259 -------cctgtg-a--a---------------tgtaaa--t-taa-aaaca--t
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180278 25 -    412891 -------tctgtg-c--a---------------cataaa-at-taa-aaaca--t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53030 25 -     68529 -------cttgtg-g--a---------------tgtaaa-gt-taa-agaca--t
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3078 23 +     17741 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3703 23 -     15923 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                673985 23 +   5030052 CCA--TGC---------A---------------TGTAAA-AT-T-A-GGACA--T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               3979 23 -     16391 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3538 23 -     17186 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27128 11 -     32367 -------------------------------------aa-tt-taa-aaag----
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 30 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  8792 25 -     15198 -------tctgtg-c--a---------------cataaa-at-taa-aaaca--t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276600 23 +  21539123 ccg--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12766 23 +     48076 ccg--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7901 23 -     28759 ccg--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35457 23 +     44353 ccg--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50826 23 -     71267 ccg--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24884 23 -     33135 ccg--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966534 13 -  23207421 -------cctgtg-a--a---------------tgtaa-----------------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 6
s Balaenoptera_bonaerensis.DF411050.1                         3035 13 -     25979 -------cctgtg-a--a---------------tgtaa-----------------
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 6
s Beatragus_hunteri.BeaHun_scaffold_7278                     92862 25 +    124022 -------cctgtg-g--g---------------tataaa-gt-taa-aaaca--t
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36060 25 +    288883 -------cctgtg-g--a---------------tgtaaa-gt-taa-aaaca--t
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423200 25 -  48749331 -------cc--tgtcg-a---------------tgtaaa-gt-taa-aaaca--t
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      768801 25 +   1948126 -------cc--tgtcg-a---------------tgtaaa-gt-taa-aaaca--t
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559346 25 -  45695690 -------cc--tgtcg-a---------------tataaa-gt-taa-aaaca--t
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536027 25 -   4408762 -------cctgtg-g--a---------------tgtaaa-gt-taa-aaaca--t
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9691 23 +     28062 cca--ggc---------a---------------tgtaaa-at-t-a-cgaca--t
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  44985 23 -     91139 cca--ggc---------a---------------tgtaaa-at-t-a-cgaca--t
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22511 23 +     95584 cca--ggc---------a---------------tgtaaa-at-t-a-cgaca--t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22424 23 +    119600 cca--ggc---------a---------------tgtaaa-at-t-a-cgaca--t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12075 23 +     18648 ccg--tgc---------a---------------cataaa-at-t-a-ggaca--t
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11580 23 -     13885 cca--tgc---------a---------------tgtaca-at-t-a-ggaca--t
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3679 23 -      8861 ccg--tgc---------a---------------cgtaaa-at-t-a-ggaca--t
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456072 23 + 189096842 CCG--TGC---------A---------------CATAAA-AT-T-A-GGACA--T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3593 23 +      8664 ccg--tgc---------a---------------cataaa-at-t-a-ggaca--t
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7633944 25 +  17673402 -------cctgtg-a--a---------------tgcaaa-gt-tac-aaaca--t
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4668245 25 +   7040546 -------cctgtg-a--a---------------tgcaaa-gt-tac-aaaca--t
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1211933 25 +   1652518 -------cctgtg-a--a---------------tgcaaa-gt-tac-aaaca--t
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42508616 25 +  60362399 -------cttatg-c--a---------------tgtaaa-at-tca-aagca--t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12251 25 -     23171 -------cttatg-c--a---------------tgtaaa-at-tca-aagca--t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225592 25 +   9314153 -------cttatg-c--a---------------tgtaaa-at-tca-aagca--t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41618729 25 +  59632846 -------cttatg-c--a---------------tgtaaa-at-tca-aagca--t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110310 25 -  63665305 -------cttatg-c--a---------------tgtaaa-at-tca-aagca--t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27415876 25 -  46296322 -------cctgtg-a--a---------------tgtaaa-gt-taa-aaaca--t
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26597873 25 +  44709034 -------cctgtg-a--a---------------tgtaaa-gt-taa-aaaca--t
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    1801 23 -     20114 c---atgc---------a-------------ca--gaaa-at-taa-taaag--t
i Capromys_pilorides.CapPil_scaffold_26391               I 20 C 0
s Carlito_syrichta.NW_007259797.1                           274072 24 +    496798 TTG--TGC---------A---------------TGTAAA-AT-CTA-AAACA--T
i Carlito_syrichta.NW_007259797.1                        I 10 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               3666 25 +      9923 -------tctgtg-c--a---------------cataaa-at-taa-aaaca--t
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31369 23 -     39886 t---ttgc---------a---------------tataaa-at-taa-atgta--t
i Castor_canadensis.CasCan_scaffold_39952                I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     82866 25 -    217609 -------cctatg-a--a---------------tgtaaa-at-tta-aaaca--t
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4999777 21 +  23392119 c---atgc---------a--------t---------aaa-at-taa-aagca--t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5003218 21 +  23407841 c---atgc---------a--------t---------aaa-at-tga-aaaca--t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       66295 21 -     66877 c---aggc---------a--------t---------aaa-at-tga-aaaca--t
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           6993 23 -     12580 ccg--tgc---------a---------------cataaa-at-t-a-ggaca--t
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45051 23 +     53515 ccg--tgc---------a---------------cataaa-at-t-a-ggaca--t
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  375785 23 -  26074798 cca--tgc---------a---------------tgtaaa-at-t-a-gaaca--t
i Cebus_albifrons.Contig27                               I 2834 C 0
s Cebus_olivaceus.k141_1404781                                9855 23 -     34880 cca--tgc---------a---------------tgtaaa-at-t-a-gaaca--t
i Cebus_olivaceus.k141_1404781                           I 9 C 0
s Cebus_unicolor.k141_1654760                                68951 23 -     89041 cca--tgc---------a---------------tgtaaa-at-t-a-gaaca--t
i Cebus_unicolor.k141_1654760                            I 9 C 0
s Cephalopachus_bancanus.k141_1140705                         1735 24 -     76265 ttg--tac---------a---------------tgtaaa-at-tta-aaaca--t
i Cephalopachus_bancanus.k141_1140705                    I 10 C 0
s Ceratotherium_simum.JH767749.1                          15495196 25 -  27778364 -------cccatg-c--a---------------tgtaaa-at-taa-aaaca--t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22029 25 +     27315 -------cccatg-c--a---------------tgtaaa-at-taa-aaaca--t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143690 23 -   4669795 CCA--CAC---------A---------------TGTAAA-AT-T-A-AGACA--T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47429 23 +     47900 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2862 23 -     14410 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47244 23 -    148725 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29522 23 -     40656 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9481 23 +     20796 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14595 23 -     17524 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30327 23 -     34525 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14105 23 -     25376 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366694 23 -  39242232 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272419 23 +  21565898 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34786 23 -     45857 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29687 23 -     32606 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5848 23 +      8499 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28247 23 +     70610 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25209 23 +     36323 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10780 23 -     32913 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Cheracebus_lucifer.k141_2312002                        I 9 C 0
s Cheracebus_lugens.k141_1179667                             21193 23 -     40346 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Cheracebus_lugens.k141_1179667                         I 9 C 0
s Cheracebus_regulus.k141_471822                             21448 23 +    216457 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Cheracebus_regulus.k141_471822                         I 9 C 0
s Cheracebus_torquatus.k141_890198                           21237 23 +     39636 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Cheracebus_torquatus.k141_890198                       I 9 C 0
s Chiropotes_albinasus.k141_1091259                          33222 23 -     52013 cca--tgc---------a---------------tgtaaa-at-t-g-ggaca--t
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44325 23 -    112038 cca--ggc---------a---------------tgtaaa-at-t-a-tgaca--t
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9876 23 +     34062 cca--ggc---------a---------------tgtaaa-at-t-a-tgaca--t
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346109 23 +  18827391 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12648 23 -     44032 tca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307495 23 - 135778131 CCA--CAC---------A---------------TGTAAA-AT-T-A-AGACA--T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411903 23 -   2368649 CCA--CAC---------A---------------TGTAAC-AT-T-A-AGACA--T
i Colobus_angolensis.KN981557.1                          I 14 C 0
s Colobus_guereza.LG01                                      381785 23 - 200372422 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Colobus_guereza.LG01                                   I 14 C 0
s Colobus_polykomos.k141_906115                               5337 23 -     84244 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Colobus_polykomos.k141_906115                          I 14 C 0
s Condylura_cristata.JH655891.1                           35810401 18 +  53390261 -----------------a---------------cataaa-tt-taa-aaaca--t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          5948 25 -      8242 -------cctggg-c--a---------------cacaaa-at-tag-aaaca--t
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47352  9 -     83289 -------------------------------------------caa-aataa--c
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213118864  9 - 224834208 -------------------------------------------caa-aatac--c
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12229  7 +     12657 ---------------------------------------------a-atata--t
i Crocidura_indochinensis.CroInd_scaffold_77846          I 17 I 16
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7552 16 +     87169 -------ttcatg-c--a---------------tataaa-at-------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 8
s Ctenodactylus_gundi.CteGun_scaffold_65                    649830 23 -   1526836 c---atgc---------a---------------tacaaa-at-taa-aaaca--t
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22471 23 +     50838 c---atac---------a--------tg-------taaa-at-taa-taaag--t
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 21 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  10976 23 +     36344 c---aaga---------a--------tg-------taaa-at-taa-aaaca--t
i Cuniculus_paca.CunPac_flattened_line_7025              I 21 I 983
s Dasyprocta_punctata.DasPun_flattened_line_15900            31401 23 +     75252 c---atgc---------a--------tg-------taaa-at-taa-aaaca--t
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 20 C 0
s Delphinapterus_leucas.KZ290073.1                        18634938 13 -  35494412 -------cctatg-a--a---------------tgtaa-----------------
i Delphinapterus_leucas.KZ290073.1                       C 0 I 6
s Desmodus_rotundus.KZ672289.1                            11868657 25 -  20541912 -------cctttt-c--a---------------cataaa-at-taa-aacca--t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667467 25 -   1390856 -------cccatg-c--a---------------tgtaaa-at-taa-aaaca--t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142269 25 -    198055 -------cccatg-c--a---------------tgtaaa-at-taa-aaacc--t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955030 15 -  37912305 t---atga---------a---------------tgtaaa-at-t-----------
i Dipodomys_ordii.KN672350.1                             I 23 I 1
s Dipodomys_stephensi.DipSte_scaffold_89095                   9944 15 -     10735 T---ATGA---------A---------------TGTAAA-AT-T-----------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 23 I 1
s Dolichotis_patagonum.DolPat_scaffold_80628                 12533 23 +     14636 t---atgc---------a--------tg-------taca-at-taa-aaata--t
i Dolichotis_patagonum.DolPat_scaffold_80628             I 21 C 0
s Eidolon_helvum.AWHC01266696.1                               9309 17 +     19438 -------ttcaag-c--a---------------cataaa-at-t-----------
i Eidolon_helvum.AWHC01266696.1                          C 0 I 7
s Elaphurus_davidianus.JRFZ01104969.1                       245657 25 -    607251 -------cctgtg-g--a---------------tgtaaa-gt-taa-aaaca--t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35064  9 +    110024 -------------------------------------------TAA-CATTT--T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           16993  9 +     18970 -------------------------------------------CAA-AATTT--T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925173 24 +  41312741 -------cc-ata-c--a---------------tgtaaa-at-tca-aagca--t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582453  9 +  14770903 -------------------------------------------taa-aatag--t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3044935 25 -   4378816 -------tccatg-c--a---------------tataaa-at-taa-aaaca--t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21378865 25 +  39960074 -------tccatg-c--a---------------tataaa-at-taa-aaaca--t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              414847 25 -    498745 -------tccatg-c--a---------------tataaa-at-taa-aaaca--t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671169 17 +   7059049 ---------------------------------cataaa-at-taa-aaaca--t
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265637 23 +  21539334 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74148 13 -    133382 -------cctgtg-a--a---------------tgtaa-----------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 6
s Eubalaena_japonica.EubJap_flattened_line_57114              1863 13 +     25849 -------cctgtg-a--a---------------tgtaa-----------------
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 I 6
s Felis_catus.CM001381.2                                 186250169 25 - 206538554 -------ccgatg-c--a---------------tacaaa-at-taa-aaaca--t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120125 25 - 205367284 -------ccgatg-c--a---------------tacaaa-at-taa-aaaca--t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                   767 25 +     25330 -------ccgatg-c--a---------------tacaaa-at-taa-aaaca--t
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2925765 23 -   3816255 c---atgc---------a-------------cg--taaa-at-taa-acata--t
i Fukomys_damarensis.KN121974.1                          I 21 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                4731 23 -     28519 c---atgc---------a---------------tgtaaa-at-tga-aaaca--t
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       1920 25 +    660261 -------cctgtg-g--a---------------cgtaaa-gt-taa-aaaca--t
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            4807  6 -      6791 -----------------------------------------------aaact--t
i Glis_glis.GliGli_scaffold_163929                       I 8 C 0
s Gorilla_beringei.k141_935316                                 741 23 +     34797 cca--tgc---------a---------------tgtaac-at-t-a-agaca--t
i Gorilla_beringei.k141_935316                           C 0 C 0
s Gorilla_gorilla.LT578336.1                                 75330 23 +  33314783 cca--tgc---------a---------------tgtaac-at-t-a-agaca--t
i Gorilla_gorilla.LT578336.1                             C 0 I 58
s Graphiurus_murinus.GraMur_scaffold_10447                    6682  6 -     78134 -----------------------------------------------aaagt--t
i Graphiurus_murinus.GraMur_scaffold_10447               I 8 C 0
s Helogale_parvula.HelPar_flattened_line_2585                33956 16 -    327341 -------ctcctg-c--a---------------tagaaa-at-------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 8
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15587 25 +     48891 -------cctgtg-a--a---------------tgtaaa-gt-taa-aaaca--t
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938206 23 -  22651954 c---atgt---------a--------tg-------taaa-at-tta-aaaca--t
i Heterocephalus_glaber.JH602082.1                       I 21 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               10975 24 -     36432 -------cttgtg-a--a---------------tgtaaa-at-taa--aaca--t
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556019 26 -   1711038 -------cctgtg-c--a---------------cataaagac-tga-aaaca--t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_363447                388 26 +       852 -------cctgtg-c--a---------------cataaagac-aga-ataca--t
i Hipposideros_galeritus.HipGal_scaffold_363447          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145300 23 -    630532 cca--tgc---------a---------------tgtaaa-gt-t-a-agaca--t
i Hoolock_leuconedys.ctg274                                 I 15 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73588 16 +     83186 -------cacatg-c--a---------------tataaa-at-------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 8
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75140 32 +    143317 c---atgg---------aaa-agaagtgaaaca--taaa-at-taa-aaa-----
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 21 C 0
s Hylobates_agilis.k141_1155965                               8346 23 +     12352 cca--tgc---------a---------------tgtaaa-at-t-a-agaca--t
i Hylobates_agilis.k141_1155965                          I 15 C 0
s Hylobates_klossii.k141_738755                              15533 23 +     55766 cca--tgc---------a---------------tgtaaa-at-t-a-agaca--t
i Hylobates_klossii.k141_738755                          I 15 C 0
s Hylobates_pileatus_b.LG02                                       2055061 23 + 191637585 cca--tgc---------a---------------tgtaaa-at-t-a-agata--t
i Hylobates_pileatus_b.LG02                                     I 15 C 0
s Hylobates_pileatus_a.tarseq_633                            7803939 23 +  11177569 cca--tgc---------a---------------tgtaaa-at-t-a-agata--t
i Hylobates_pileatus_a.tarseq_633                          I 15 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      10986 23 -    135385 c---atgc---------a---------------tgtaaa-at-taa-aaaca--t
i Hystrix_cristata.HysCri_scaffold_5660                  I 21 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390238 12 +   7955117 -------------------------------------ga-ttttaa-aaag----
i Ictidomys_tridecemlineatus.JH393364.1                  I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13042 13 -     16823 -------cctgtg-a--a---------------tgtaa-----------------
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 6
s Kogia_breviceps.KogBre_flattened_line_3970                 74882 13 -     97402 -------cctgtg-a--a---------------tgtaa-----------------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 6
s Lagothrix_lagothricha.k141_246028                          45151 23 +    110728 ccg--tgc---------a---------------tgtaaa-at-t-a-ggacc--t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    35870  9 -     49555 -------------------------------------------taa-aatag--t
i Lasiurus_borealis.LasBor_scaffold_26245                C 0 I 73
s Leontocebus_fuscicollis.k141_3470480                         627 23 -     23187 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            940 23 -     14280 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         583 23 +      3713 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      774 23 +      8855 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5576 23 -     13645 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816472 25 -   3914936 -------cccatg-c--a---------------tgtaaa-at-tca-aaaca--t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     21684 12 +     24238 --------------------------------------a-at-tga-aagca--t
i Lepus_americanus.LepAme_scaffold_56121                 I 12 C 0
s Lipotes_vexillifer.KE559953.1                             344224 13 +    662738 -------cctgtg-a--a---------------tgtaa-----------------
i Lipotes_vexillifer.KE559953.1                          C 0 I 6
s Lophocebus_aterrimus.ctg367                               336572 23 -   1826925 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                41617884 25 +  59628241 -------ctcatg-c--a---------------tgtaaa-at-tca-aagca--t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              47964 23 -     61512 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375626 23 -  60120075 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27894 23 +     30207 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2732 23 -      5035 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27847 23 +     30527 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39023 23 -     50087 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48768 23 +     51645 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417970 23 - 187317192 CCA--CAC---------A---------------TGTAAA-AT-T-A-AGACA--T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402201 23 +  25927173 CCA--CAC---------A---------------TGTAAA-AT-T-A-AGACA--T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51372 23 -     62418 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3903 23 +     14901 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47845 23 +     59329 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273752 23 +    668171 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2384 23 -      5049 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5550 23 +     17132 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226243 17 -    270270 -------ttca-gac--a---------------cataaa-at-t-----------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 7
s Mandrillus_leucophaeus.scaffold280                        325040 23 +  24302211 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359871 23 -    752769 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676520 25 -    737560 -------cctgta-c--a---------------tgtaaa-cc-taa-aaata--t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             223817 25 +    317179 -------cctatg-c--a---------------tgtaaa-cc-taa-aaata--t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504468 11 +  40650429 -------------------------------------ga-tt-taa-aaag----
i Marmota_marmota.CZRN01000018.1                         I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       153645 25 +    207569 -------cccatg-c--a---------------tataaa-at-gaa-aaaca--t
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29225 24 -     74585 -------cc-ata-c--a---------------tgtaaa-at-tca-aagca--t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17432705  9 +  29670104 -------------------------------------------caa-aatac--c
i Mesocricetus_auratus.KB708134.1                        C 0 I 804
s Mesoplodon_bidens.MesBid_scaffold_6114                     90508 13 +     93471 -------cctgtg-a--a---------------tgtaa-----------------
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 6
s Mico_argentatus.k141_582562                                12174 23 +     17804 ccg--tgc---------a---------------cataaa-at-t-a-ggaca--t
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12674 23 -     12984 ccg--tgc---------a---------------cataaa-at-t-a-ggaca--t
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     20993 23 -     26561 ccg--tgc---------a---------------cataaa-at-t-a-ggaca--t
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188238 25 +    200668 -------tctgtg-c--a---------------catgaa-at-taa-aaaca--t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966479  9 +  27267610 -------------------------------------------CAA-AATTT--C
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368069 25 -   8254450 -------cc--tg-caca---------------cataaa-ac-taa-aaaca--t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             45800 25 -     48117 -------cc--tg-caca---------------cataaa-ac-taa-aaaca--t
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25134 23 -     27822 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11705 25 +     27589 -------ctcatg-c--a---------------tgtaaa-at-tca-aaaca--t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362616 13 +    437263 -------cctatg-a--a---------------tgtaa-----------------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 6
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182654 24 +    366855 -------cc-ctg-c--a---------------cataaa-at-gaa-aaaca--t
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  31818 25 -     82753 -------cctgtg-g--a---------------tgtaaa-gt-taa-aaaca--t
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21705 16 -     63510 -------ctcctg-c--a---------------tagaaa-at-------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 8
s Murina_feae.MurFea_scaffold_17764                          45043 25 +     47283 -------tctgtg-c--a---------------cataaa-gt-taa-agtag--t
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35597673  9 + 120012414 -------------------------------------------caa-aatac--t
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41691213  9 + 129401213 -------------------------------------------caa-aatac--t
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58219175  9 +  89631738 -------------------------------------------caa-aatac--t
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39500132  9 + 130317789 -------------------------------------------caa-aatac--t
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               2801 13 -    124358 -------------------------------------ga-tt-aaa-aaact--t
i Muscardinus_avellanarius.MusAve_scaffold_5560          I 2 C 0
s Mustela_putorius.JH418006.1                             14358100 24 +  14710649 -------cc-ata-c--a---------------tgtaaa-at-tca-aagca--t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                       866 23 -     27262 t---atac---------a--------tg-------gaaa-at-taa-taaag--t
i Myocastor_coypus.MyoCoy_scaffold_57531                 I 21 C 0
s Myotis_brandtii.KE162005.1                               9797051 25 +  10118263 -------tctgtg-c--a---------------cataaa-at-taa-aatag--t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391226 25 +   6019432 -------tctgtg-c--a---------------cataaa-at-taa-aatag--t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387264 25 +   4330536 -------tctgtg-c--a---------------cataaa-at-taa-aatag--t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6051 25 +     18357 -------tctgtg-c--a---------------cataaa-at-taa-aatag--t
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950083  9 +   3037898 -------------------------------------------caa-aatac--a
i Nannospalax_galili.KL204047.1                          C 0 I 16
s Nasalis_larvatus.k141_1350636                              31918 23 +     34575 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469152 25 -  31847680 -------cccatg-c--a---------------tgtaaa-at-tca-aaaca--t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235282 13 -   7148211 -------cctatg-a--a---------------tgtaa-----------------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 6
s Noctilio_leporinus.NocLep_scaffold_7894                   130986 25 -    149072 -------cctgtg-c--a---------------tacaaa-at-taa-aaaca--t
i Noctilio_leporinus.NocLep_scaffold_7894                I 20 C 0
s Nomascus_annamensis.k141_1771965                           56234 23 -    132029 cca--tgc---------a---------------tgtaaa-at-t-a-agaca--t
i Nomascus_annamensis.k141_1771965                       I 15 C 0
s Nomascus_concolor.k141_735679                              12329 23 -     16345 cca--tgc---------a---------------tgtaaa-at-t-a-agaca--t
i Nomascus_concolor.k141_735679                          I 15 C 0
s Nomascus_gabriellae.k141_57920                             18218 23 +     22201 cca--tgc---------a---------------tgtaaa-at-t-a-agaca--t
i Nomascus_gabriellae.k141_57920                         I 15 C 0
s Nomascus_siki_b.tarseq_93                            8416448 23 -  22158432 cca--tgc---------a---------------tgtaaa-at-t-a-agaca--t
i Nomascus_siki_b.tarseq_93                          I 15 C 0
s Nomascus_siki_a.k141_941534                                  28623 23 -     54323 cca--tgc---------a---------------tgtaaa-at-t-a-agaca--t
i Nomascus_siki_a.k141_941534                              I 15 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201588 25 +   9404916 -------ctcatg-c--a---------------tgtaaa-at-tca-aagca--t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059130 23 -  11899542 c---atgt---------a--------tg-------taaa-at-taa-tgaag--t
i Octodon_degus.JH651603.1                               I 21 C 0
s Odobenus_rosmarus.KB229312.1                             1454921 25 +   2017862 -------cccatg-c--a---------------tgtaaa-at-tca-aaaca--t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442211 26 -    630418 -------cctgtg-g--a---------------tgtaaa-gt-taaaaaaca--t
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          21871 25 +    150152 -------cctgtg-g--a---------------tttaaa-gt-taa-aaaca--t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97095  9 -    140218 -------------------------------------------caa-aattt--t
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7634  9 -     41509 -------------------------------------------cag-aacac--c
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 16
s Orcinus_orca.KB316932.1                                  8105686 13 +  10937097 -------cctatg-a--a---------------tattt-----------------
i Orcinus_orca.KB316932.1                                C 0 I 6
s Oryctolagus_cuniculus.CM000791.1                       107108345 12 - 174332312 --------------------------------------a-at-taa-aaaca--t
i Oryctolagus_cuniculus.CM000791.1                       I 12 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42543 25 +    559221 -------ctcatg-c--a---------------tgtaaa-at-tca-aagca--t
i Otocyon_megalotis.JAEUCK010005147.1                    I 27 C 0
s Ovis_aries.CM001607.2                                   26410613 25 -  44047080 -------cctgtg-a--a---------------tgtaaa-gt-taa-aaaca--t
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11236 25 +     17875 -------cctgtg-a--a---------------tgtaaa-gt-taa-aaaca--t
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  190 23 +      1186 CCA--TGC---------A---------------TGTAAC-AT-G-A-AGACA--T
i Pan_paniscus.AJFE02001037.1                            I 59 C 0
s Pan_troglodytes.CM009242.2                               1476810 23 - 189151597 CCA--TGC---------A---------------TGTAAC-AT-G-A-AGACA--T
i Pan_troglodytes.CM009242.2                             I 54 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   28171 25 -    230217 -------ccgatg-c--a---------------tacaaa-at-taa-aaaca--t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465403 25 -  18783137 -------ccgatg-c--a---------------tacaaa-at-taa-aaaca--t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976004 25 +   8748460 -------ccgatg-c--a---------------taaaaa-at-taa-aaaca--t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622131 25 +   2937107 -------cctgtg-a--a---------------tgtaaa-gt-taa-aaaca--t
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246049 23 - 183742232 CCA--CAC---------A---------------TGTAAA-AT-T-A-AGACA--T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12334 23 +     21308 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295077 23 -  20919399 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24974 23 -     27687 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1653 23 +     10553 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1613 23 -     10386 cca--cac---------a---------------tgtaaa-at-t-a-agaca--t
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18342 16 +     78924 -------ctcatg-c--a---------------tataaa-at-------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 8
s Perognathus_longimembris.PerPac_flattened_line_89005        7227 16 +      9367 T--CATGA---------A---------------TGTAAA-AT-T-----------
i Perognathus_longimembris.PerPac_flattened_line_89005   I 12 I 1
s Peromyscus_maniculatus.KI615324.1                         250854  9 +  18517816 -------------------------------------------TAG-AACAC--T
i Peromyscus_maniculatus.KI615324.1                      C 0 I 16
s Petromus_typicus.PetTyp_scaffold_17301                     35221 22 -     56120 t---aggc---------a--------tg-------taa--at-taa-aatca--t
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7208 13 -     63832 -------cctatg-a--a---------------tgtaa-----------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 6
s Piliocolobus_badius.k141_2704958                            5296 23 +     55023 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4818 23 -     89929 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5408 23 +     40849 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257138 23 +  14605196 CCA--CAC---------A---------------TGTAAC-AT-T-A-AGACA--T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7561  9 +     22231 -------------------------------------------taa-aatag--t
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66676 23 +    207309 cca--tgc---------a---------------tgtaaa-gt-t-a-ggact--t
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7769 23 -     25401 cca--tgc---------a---------------tgtaaa-gt-t-a-ggact--t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33517 23 +     58159 cca--tgc---------a---------------tgtaaa-gt-t-a-ggact--t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33793 23 +     63561 cca--tgc---------a---------------tgtaaa-gt-t-a-ggact--t
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33548 23 +     51148 cca--tgc---------a---------------tgtaaa-gt-t-a-ggact--t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558523 23 -   4542175 cca--tgc---------a---------------tgtaaa-gt-t-a-ggact--t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33532 23 +     51125 cca--tgc---------a---------------tgtaaa-gt-t-a-ggact--t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4229 13 +     19503 -------cctgtg-a--a---------------tgtaa-----------------
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 6
s Plecturocebus_bernhardi.k141_2549090                        9954 23 +     39866 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5036 23 -      9282 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44440 23 -     87950 cta--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44834 23 -     88961 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9532 23 -     39403 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44483 23 +     87928 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9531 23 -     60166 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16452 23 -     67232 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44384 23 -     90634 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45851 23 +     89403 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   181995 23 - 189387572 CCA--TGT---------A---------------TATGAC-AT-T-A-AGACA--T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196738 23 -   9816681 cca--tgt---------a---------------tatgac-at-t-a-agaca--t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30498 23 +     69807 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47679 23 -     80239 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55323 25 -     66298 -------tctgtg-c--a---------------cgtaaa-at-gaa-aaaca--t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7710 24 -     18639 -------cc-ata-c--a---------------tgtaaa-at-tca-aagca--t
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5843861 17 -  28871421 -------ttcatg-c--a---------------catcaa-at-t-----------
i Pteropus_alecto.KB030862.1                             C 0 I 7
s Pteropus_vampyrus.KN525825.1                             3540377 17 -   4952924 -------ttcatg-c--a---------------catcaa-at-t-----------
i Pteropus_vampyrus.KN525825.1                           C 0 I 7
s Puma_concolor.QAVW01001104.1                            18102392 25 +  38429054 -------ccgatg-c--a---------------tacaaa-at-taa-aaaca--t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29865 23 +     91421 cca--cac---------g---------------tgtaac-at-t-a-agaca--t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156417 23 -   7812017 cca--cac---------g---------------tgtaac-at-t-a-agaca--t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10717 23 +     72585 cca--cac---------g---------------tgtaac-at-t-a-agaca--t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4732 25 -     55207 -------cctgtg-g--a---------------tgtaaa-gt-taa-aaaca--t
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37025793  9 -  90668790 -------------------------------------------taa-aatac--t
i Rattus_norvegicus.chr16                                C 0 I 16
s Rhinolophus_sinicus.LVEH01000134.1                       2917786 25 +   3329780 -------cccatg-c--a---------------cgtaaa-at-taa-taaca--t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4323 23 +      7119 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104124993 23 + 195417433 CCA--CAC---------A---------------TGTAAC-AT-T-A-AGACA--T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239165 23 -   7961872 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78355 17 -    116970 -------ttcatc-c--a---------------cataaa-at-t-----------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 7
s Saguinus_bicolor.k141_161125                                9118 23 +     12412 cca--tgc---------a---------------tgtaaa-at-t-g-ggaca--t
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               579 23 +      9876 cca--tgc---------a---------------tgtaaa-at-t-g-ggaca--t
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16182 23 -     24931 CCA--TGC---------A---------------TGCAAA-AT-T-G-GGACA--T
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1062 23 +      4564 cca--tgc---------a---------------tgtaaa-at-t-g-ggaca--t
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3867 23 -      7443 cca--tgc---------a---------------tgtaaa-at-t-g-ggaca--t
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394772 23 - 209938924 cca--tgc---------a---------------tgtaaa-at-t-g-ggaca--t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1482 23 +     10149 cca--tgc---------a---------------tgtaaa-at-t-g-ggaca--t
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                822 23 +     10417 cca--tgc---------a---------------tgtaaa-gt-t-g-ggaca--t
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14183 25 +     16473 -------cctgtg-g--a---------------tgtaaa-gt-taa-aaaca--t
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110951 23 + 121099817 CCA--TGC---------A---------------TGTAAA-AT-T-A-GGACA--T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32518 23 -     47369 cca--tgc---------a---------------tgtaaa-at-t-a-ggacg--t
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32904 23 -     79414 CTA--TGC---------A---------------TGTAAA-AT-T-A-GGACG--T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29595 23 -     34454 CTA--TGC---------A---------------TGTAAA-AT-T-A-GGACG--T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              16996 23 -     22428 CTA--TGC---------A---------------TGTAAA-AT-T-A-GGACG--T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32150 23 -     47109 cca--tgc---------a---------------tgtaaa-at-t-a-ggacg--t
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240175 23 +   5703754 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Sapajus_apella.ctg103                                  I 9 C 0
s Sapajus_macrocephalus.k141_796559                           9765 23 +     21866 cca--tgc---------a---------------tgtaaa-at-t-a-ggaca--t
i Sapajus_macrocephalus.k141_796559                      I 9 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122204 18 +    313613 -----------------a---------------cataaa-aa-taa-aaaca--t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 19
s Semnopithecus_entellus.k141_583282                          1304 23 +     11297 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31697 23 +     58920 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18195 23 -     45317 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25853 23 -     42441 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28529 23 -     29113 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31606 23 -     48123 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52639  9 +     77746 -------------------------------------------caa-aatat--c
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1866993 18 -   1910179 -----------------a---------------catcaa-at-caa-aattc--t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674221 30 +  18376816 -----------------acacatatatgta---tatatt-at-taa-acaca--t
i Sorex_araneus.JH798187.1                               I 11 C 0
s Spermophilus_dauricus.KZ294078.1                         1871808 12 +   3870691 -------------------------------------ga-ttttaa-aaag----
i Spermophilus_dauricus.KZ294078.1                       I 31 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             15926 24 -     97271 -------cc-atg-t--a---------------tgtaaa-at-tca-aaaca--t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128553 16 +    196729 -------ctcctg-c--a---------------tagaaa-at-------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 8
s Sus_scrofa.CM000828.4                                    6647812 25 +  69701581 -------cctatg-a--a---------------tgtaaa-gt-tta-aaaca--t
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393705 23 +   1523678 cca--tgc---------a---------------tgtaaa-at-t-a-agaca--t
i Symphalangus_syndactylus.tarseq_199                    I 15 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17274 25 +     22964 -------cctgtg-c--a---------------cataaa-at-taa-aaaca--t
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194653 25 +    199430 -------tccatg-c--a---------------tgtaaa-at-taa-aaaca--c
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108633 25 -    539355 -------tccatg-c--a---------------tgtaaa-at-taa-aaaca--c
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4263 24 +      9917 ttg--tgc---------a---------------tgtaaa-at-ttt-aaact--t
i Tarsius_lariang.k141_1733899                           I 10 C 0
s Tarsius_wallacei.k141_226975                               11059 24 +     20590 ttg--tgc---------a---------------tgtaaa-at-ttt-aaact--t
i Tarsius_wallacei.k141_226975                           I 10 C 0
s Theropithecus_gelada.CM009954.1                           355858 23 - 186847797 CCA--CAC---------A---------------TGTAAA-AT-T-A-AGACA--T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27501 22 -     33621 c---aggc---------a--------tg-------taa--at-taa-aaaca--t
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483581 25 -    610378 -------tctgtg-c--a---------------cataaa-at-taa-aaaca--g
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23605 23 +     26378 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36404 23 -     78344 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22930 23 +     25722 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31360 23 -     62838 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31351 23 +     46913 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12088 23 -     28527 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33295 19 -     64340 c------c---------a---------------tgtaac-at-t-a-agaca--t
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31333 19 -     63452 c------c---------a---------------tgtaac-at-t-a-agaca--t
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12780 23 +     22490 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          746 23 +      9911 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          541 23 -     33539 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258300 23 -   6242583 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4319 23 +     19340 cca--cac---------a---------------tgtaac-at-t-a-agaca--t
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177441 24 -    200418 -------cctgtg-t--a---------------tg-aaa-gt-taa-aaaca--t
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839214 23 -   4065304 c---ttgc---------a---------------tgtaaa-at-gaa-acaga--t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13306 23 -     70247 c---ttgt---------a---------------tgtaaa-at-gaa-acaga--t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17368811 13 -  33153633 -------cctatg-a--a---------------tgtaa-----------------
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 6
s Uropsilus_gracilis.UroGra_scaffold_46687                    7047 18 -     21056 -----------------a---------------tataat-at-taa-aaaca--t
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185124 25 +   5085361 -------cccatg-c--a---------------agtaca-at-tca-aaaca--t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   79336 25 +   5488506 -------cctgtg-a--a---------------tgcaaa-gt-tac-aaaca--t
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108482 25 -    112863 -------ctcatg-c--a---------------tgtaaa-at-tca-aagca--t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        177690 11 -    224448 -------------------------------------ga-tt-taa-aaag----
i Xerus_inauris.XerIna_scaffold_2302                     I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32128 25 -     86975 -------cccatg-c--a---------------tgtaaa-at-tca-aaaca--t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       3925 15 -     63895 -------------------------------------aa-at-taa-aaaactac
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 11 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639             772 13 +      3447 -------cctgtg-a--a---------------tgtaa-----------------
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 I 6
e Chrysochloris_asiatica.ChrAsi_scaffold_510450               1901 278 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    49396 73 +    145209 I
e Echinops_telfairi.JH980293.1                            62858214 80 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               2589 223 +     11607 I
e Elephantulus_edwardii.JH947257.1                         9113279 68 -  10337057 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            609346 87 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                 1866 90 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   22296 79 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2112554 81 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            15196 81 -     19938 I
e Trichechus_manatus.JH594705.1                            6485301 82 -  10818551 I
e Psammomys_obesus.NESX01036366.1                            40656  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_128773                 2495 82 -     12774 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53122  0 -    140813 C
e Loxodonta_africana.GL010049.1                           39087697 84 +  43346337 I
e Jaculus_jaculus.JH725527.1                               1242424 337 +   9596543 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                5963 82 +      8654 I
e Allactaga_bullata.AllBul_scaffold_20030                    20875 333 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28723  2 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9683 41 +     36723 CA-A-----T------TACATGTGTGT--GCTT--T--T---------G---C-C----TC--TTGTT----AATT--------TTT--G-T-T
s Acinonyx_jubatus.LLWD01001279.1                           816191 43 +   1699592 ca-a-----t------tacatttgtat--gcttt-t--t--------tt---t-c----tt--ctgtt----ga------ct--ttt--c-t-t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418693 46 +  29979442 ca-a-----t------tatatttgtat--acctt-t--t---------t---t-caaaact--ctgtc----ga-------tc-ttt--a-t-t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            218695 45 +    347723 ca-a-----t------tatatttgtat--gcctt-t--t---------ttttt-c----tt--ctgtt----ga-------tg-ttt--a-t-t
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50630 40 +     53615 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2657 40 +     13857 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19212 40 -     21945 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20897 40 +     32033 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74153 41 -     84148 ca-a-----t------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46391 41 -     78289 ca-a-----t------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45818 41 +     55831 ca-a-----t------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44281 41 -     64179 ca-a-----t------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1389 41 -      3959 ca-a-----t------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42906 41 +     45454 ca-a-----t------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48555 41 +     70886 ca-a-----t------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10728 41 +     30854 ca-a-----t------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34862 41 +     42133 ca-a-----t------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1591897 37 +   2318259 ca-t-----t------taaaat----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------tc-tgt--c-t-t
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180303 41 -    412891 ca-g-----t------taaacctgtat--gcct--t--t---------t---t-c----tt--ctcta----aa-------tt-tgt--c-t-t
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53055 37 -     68529 ca-t-----t------taaatt----t--tcct--t--t---------t---t-c----tc--ccatt----ta-------tc-tgt--c-t-t
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3101 41 +     17741 ca-a-----t------tacaattgtat--acct--t--t---------g---t-c----tc--tcatt----aact--------ttt--g-t-t
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3726 41 -     15923 ca-a-----t------tacaattgtat--acct--t--t---------g---t-c----tc--tcatt----aact--------ttt--g-t-t
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674008 41 +   5030052 CA-A-----T------TACAATTGTAT--ACCT--T--T---------G---T-C----TC--TCATT----AACT--------TTT--G-T-T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4002 41 -     16391 ca-a-----t------tacaattgtat--acct--t--t---------g---t-c----tc--tcatt----aact--------ttt--g-t-t
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3561 41 -     17186 ca-a-----t------tacaattgtat--acct--t--t---------g---t-c----tc--tcatt----aact--------ttt--g-t-t
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27139 42 -     32367 aa-t-----t------taaattgaaat--gctt--t--t---------t---ccc----tc--acatt----aa-------tc-tgt--t-t-t
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  8817 41 -     15198 ca-a-----t------taaacccgtat--gcct--t--t---------t---t-c----tt--ctcta----aa------ct--tgt--c-t-t
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276623 41 +  21539123 ca-a-----t------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12789 41 +     48076 ca-a-----c------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7924 41 -     28759 ca-a-----c------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35480 41 +     44353 ca-a-----t------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50849 41 -     71267 ca-a-----c------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24907 41 -     33135 ca-a-----c------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966553 41 -  23207421 ca-a-----t------taaatttgtat--tctt--t--t---------t---t-c----tc--ctgtt----ta-------tc-tgt--c-t-t
i Balaenoptera_acutorostrata.KI537508.1                  I 6 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3054 41 -     25979 ca-a-----t------taaatttgtat--tctt--t--t---------t---t-c----tc--ctgtt----ta-------tc-tgt--c-t-t
i Balaenoptera_bonaerensis.DF411050.1                    I 6 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     92887 36 +    124022 ca-t-----t------taaaat----t--tcct--t--t---------t---t-c----tc--c-att----ta-------tc-tgt--c-t-t
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36085 37 +    288883 ca-t-----t------taaatt----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------cc-tgt--c-t-t
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423225 37 -  48749331 ca-t-----t------taaatt----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------cc-tgt--c-t-t
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      768826 37 +   1948126 ca-t-----t------taaatt----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------cc-tgt--c-t-t
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559371 37 -  45695690 ca-t-----t------taaatt----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------cc-tgt--c-t-t
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536052 37 -   4408762 ca-t-----t------taaagt----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------cc-tgt--c-t-t
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9714 41 +     28062 ca-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45008 41 -     91139 ca-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22534 41 +     95584 ca-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22447 41 +    119600 ca-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12098 41 +     18648 cg-a-----t------tacatttgtat--acct--t--c---------g---c-c----tc--ttctt----aatt--------tat--g-t-t
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11603 41 -     13885 ca-a-----t------tacatttgcat--acct--t--c---------a---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3702 42 -      8861 cg-a-----t------tacatttgtat--acct--t--c---------g---c-c----tc--ttgtt----aatt--------ttt--g-tat
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456095 42 + 189096842 CG-A-----T------TACATTTGTAT--ACCT--T--C---------G---C-C----TC--TTGTT----AATT--------TTT--G-TAT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3616 42 +      8664 cg-a-----t------tacatttgtat--acct--t--c---------g---c-c----tc--ttgtt----aatt--------ttt--g-tat
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7633969 42 +  17673402 ca-a-----t------taaatttatat--tcctt-t--t---------t---c-c----tc--ctgtt----aa-------tc-tgt--c-t-t
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4668270 42 +   7040546 ca-a-----t------taaatttatat--tcctt-t--t---------t---c-c----tc--ctgtt----aa-------tc-tgt--c-t-t
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1211958 42 +   1652518 ca-a-----t------taaatttatat--tcctt-t--t---------t---c-c----tc--ctgtt----aa-------tc-tgt--c-t-t
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42508641 42 +  60362399 ca-a-----t------tatatttgtat--gcctt-t--t---------t---t-c----tt--ctgtt----ga-------tc-ttt--c-t-t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12276 42 -     23171 ca-a-----t------tatatttgtat--gcctt-t--t---------t---t-c----tt--ctgtt----ga-------tc-ttt--c-t-t
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225617 42 +   9314153 ca-a-----t------tatatttgtat--gcctt-t--t---------t---t-c----tt--ctgtt----ga-------tc-ttt--c-t-t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41618754 42 +  59632846 ca-a-----t------tatatttgtat--gcctt-t--t---------t---t-c----tt--ctgtt----ga-------tc-ttt--c-t-t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110335 42 -  63665305 ca-a-----t------tatatttgtat--gcctt-t--t---------t---t-c----tt--ctgtt----ga-------tc-ttt--c-t-t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27415901 37 -  46296322 ca-t-----t------taaaat----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------tc-tgt--c-t-t
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26597898 37 +  44709034 ca-t-----t------taaaat----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------tc-tgt--c-t-t
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    1824 44 -     20114 ca-a-----t------taaacttgcat--gcct--tctt---------t---t-ta---gt--ctgtt----ag--ca------cgt--t-c-t
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274096 41 +    496798 CA-A-----T------TAAATTTGTAT--ACCT--T--T---------G---T-C----TC--TTGTT----AATT--------TGT--C-T-T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               3691 41 +      9923 ca-a-----t------taaacccgtat--gcct--t--t---------t---t-c----tt--ctcca----aa------ct--tgt--c-t-t
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31392 43 -     39886 aa-a-----t------taaatttgtat--cact--t--t---------t---t-c----tt--ctgct----aa-------tc-tgctat-t-t
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     82891 41 -    217609 ca-a-----c------taaatttgtat--tctt--t--t---------t---t-c----tc--ctgtt----aa-------tc-tgt--t-t-t
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4999798 20 +  23392119 ca-a-----t------taaacttgcat--tcct--t----------------------------------------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 21
s Cavia_porcellus.DS562891.1                               5003239 20 +  23407841 ca-a-----t------taaacttgcat--tcct--t----------------------------------------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 21
s Cavia_tschudii.CavTsc_scaffold_23560                       66316 20 -     66877 ca-a-----t------taaacttgcat--tcct--t----------------------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 I 21
s Cebuella_niveiventris.k141_592277                           7016 41 -     12580 tg-a-----t------tacatttgtat--acct--t--c---------g---c-c----tc--ttgtt----aatt--------tat--g-t-t
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45074 41 +     53515 cg-a-----t------tacatttgtat--acct--t--c---------g---c-c----tc--ttgtt----aatt--------tat--g-t-t
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  375808 41 -  26074798 ca-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Cebus_albifrons.Contig27                               C 0 T 2818
s Cebus_olivaceus.k141_1404781                                9878 41 -     34880 ca-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                68974 41 -     89041 ca-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         1759 41 -     76265 ca-a-----t------taagtttgtat--acct--t--t---------g---t-c----tc--ttgtt----aatt--------tgt--c-t-t
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495221 41 -  27778364 ca-g-----t------taagtttgtat--gcat--t--t---------t---t-c----tt--ctgtt----ta-------tc-tgt--c-t-t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22054 41 +     27315 ca-g-----t------taagtttgtat--gcat--t--t---------t---t-c----tt--ctgtt----ta-------tc-tgt--c-t-t
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143713 40 -   4669795 CA-A-----T------TACATGTGTAT--GC-T--T--T---------G---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47452 40 +     47900 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2885 40 -     14410 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47267 40 -    148725 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29545 40 -     40656 ca-a-----t------tacatgtatat--gc-t--t--g---------g---c-c----tc--ttgtt----aatt--------gtt--g-t-t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9504 40 +     20796 ca-a-----t------tacatgtatat--gc-t--t--g---------g---c-c----tc--ttgtt----aatt--------gtt--g-t-t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14618 40 -     17524 ca-a-----t------tacatgtgtat--gc-t--t--g---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30350 40 -     34525 ca-a-----t------tacatgtgtat--gc-t--t--g---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-c
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14128 40 -     25376 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366717 40 -  39242232 ca-a-----t------tacatatgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272442 40 +  21565898 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34809 40 -     45857 ca-a-----t------tacgtgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29710 40 -     32606 ca-a-----t------tacatatgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5871 40 +      8499 ca-a-----t------tacatgtgtat--gc-t--t--g---------g---c-c----tc--ttgtt----aatt--------gtt--g-t-t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28270 40 +     70610 ca-a-----t------tacatgtgtat--gc-t--t--g---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25232 40 +     36323 ca-a-----t------tacatgtgtat--gc-t--t--g---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10803 41 -     32913 ga-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21216 41 -     40346 ga-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21471 41 +    216457 ga-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21260 41 +     39636 ga-a-----t------tacatttgtct--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33245 41 -     52013 ca-a-----a------gacattcgtat--acct--t--t---------g---c-c----tc--tcatt----aatc--------ttt--g-t-t
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44348 41 -    112038 ca-a-----t------tacatttgtct--acct--t--t---------g---c-c----tc--ttgtc----aaat--------ttt--g-t-t
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9899 41 +     34062 ca-a-----t------tacatttgtct--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346132 40 +  18827391 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12671 40 -     44032 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307518 40 - 135778131 CA-A-----T------TACATGTGTAT--GC-T--T--T---------G---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411926 40 -   2368649 CA-A-----T------TACATGCGTAT--GC-T--T--T---------G---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381808 40 - 200372422 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5360 40 -     84244 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810419 41 +  53390261 ca-a-----c------acaatttctgt--gata--t--t---------t---t-a----tc--ctatt----aa-------ta-tgt--c-t-t
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          5973 41 -      8242 ca-a-----t-------aaatttgtat--acct--t--t---------t---t-c----tt--ttgtt----ta------ttt-ttt--c-t-t
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12252 23 +     12657 -----------------------------------------------------------tc--aaattgatcaa--a----ttgtct--t-t-a
i Crocidura_indochinensis.CroInd_scaffold_77846          I 16 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47361 16 -     83289 ca-a-----g-------aaactggctt--at---------------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 15
s Cricetulus_griseus.LT883664.1                          213118873 16 - 224834208 ca-a-----g-------aaactggctt--at---------------------------------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 15
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7576 19 +     87169 ca-a-----t------tatatttgtat--tctt-------------------------------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 8 I 23
s Ctenodactylus_gundi.CteGun_scaffold_65                    649853 41 -   1526836 cc-a-----t------tgaacttctgt--gact--t--t---------t---c-t----tc--ctttt----aa-------tc-tat--t-t-c
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22494 44 +     50838 ca-g-----t------taaacttgcat--gcct--tctt---------g---t-ta---tc--ctgtt----ga--ca------tgt--t-t-c
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  11982 44 +     36344 ca-a-----t------taaacttgcat--gtct--tctt--------tt---t-t----tc--ctgtt----ga--ca------tgt--a-t-t
i Cuniculus_paca.CunPac_flattened_line_7025              I 983 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31424 43 +     75252 ca-a-----t------taaacttgcat--gcct--tttt---------t---c-t----tc--ctgtt----aa--ca------tgt--t-t-t
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18634957 41 -  35494412 ca-a-----t------taaatttgtat--tctt--t--t---------t---t-c----tc--ctgtt----ta-------tc-tgt--c-t-t
i Delphinapterus_leucas.KZ290073.1                       I 6 C 0
s Desmodus_rotundus.KZ672289.1                            11868682 42 -  20541912 ca-a-----t------taaacccgtat--gcct--t--t---------t---t-a----tc-cctcta----aa------ct--tac--c-t-t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667492 41 -   1390856 ca-g-----t------taaatttgtat--gcgt--t--t---------t---t-c----tt--ctgtt----aa-------tc-tgt--c-t-t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142294 41 -    198055 ca-g-----t------taaatttgtat--gcat--t--t---------t---t-c----tt--ctgtt----aa-------tc-tgt--c-t-t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955046 33 -  37912305 ---aaactgt------taagtttgtat--gtca--t--t---------t---a-t----tt--gtgg---------------------------
i Dipodomys_ordii.KN672350.1                             I 1 I 4
s Dipodomys_stephensi.DipSte_scaffold_89095                   9960 33 -     10735 ---AAACTGT------TAAACTTGCAT--GTCA--T--T---------T---C-T----TT--GTGG---------------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              I 1 I 4
s Dolichotis_patagonum.DolPat_scaffold_80628                 12556 20 +     14636 ca-a-----t------taaacttgcat--tcct--t----------------------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 22
s Eidolon_helvum.AWHC01266696.1                               9333 20 +     19438 ca-a-----t------taaatgtgcat--gctt--t----------------------------------------------------------
i Eidolon_helvum.AWHC01266696.1                          I 7 I 19
s Elaphurus_davidianus.JRFZ01104969.1                       245682 41 -    607251 ca-t-----t------taagtttgttt--tcct--t--t---------t---t-c----tc--ctatt----ta-----g-t--tgt--c-t-t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35073 16 +    110024 CA-A-----G-------ATATTGGCTT--AT---------------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 14
s Ellobius_talpinus.LOJH01026522.1                           17002 16 +     18970 CA-A-----G-------ATATTGGCTT--AT---------------------------------------------------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 14
s Enhydra_lutris.KZ291758.1                               24925197 25 +  41312741 ca-g-----t------tacatttgtat--gcctt-t--t---------t---t-t---------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 I 10
s Eptesicus_fuscus.JH977646.1                             12582462 41 +  14770903 ca-a-----t------taaacttgtat--gggt--t--t---------t---t-c----tt--ctata----aa-------tt-tgt--c-t-t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3044960 41 -   4378816 ca-g-----t------taaatttgtat--gcat--t--t---------t---t-c----tt--ctgtt----ag-------cc-tgt--c-t-t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21378890 41 +  39960074 ca-g-----t------taaatttgtat--gcat--t--t---------t---t-c----tt--ctgtt----ag-------cc-tgt--c-t-t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              414872 41 -    498745 ca-g-----t------taaatttgtat--gcat--t--t---------t---t-c----tt--ctgtt----ag-------cc-tgt--c-t-t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671186 42 +   7059049 ta-g-----t------taaactgatat--gcct--t--c---------t---c-c----tc--tgatt----aa-------tccttc--t-g-t
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265660 40 +  21539334 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74167 41 -    133382 ca-a-----t------taaatttgtat--tctt--t--t---------t---t-c----tc--ctgtt----ta-------tc-tgt--c-t-t
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 6 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              1882 41 +     25849 ca-a-----t------taaatttgtat--tctt--t--t---------t---t-c----tc--ctgtt----ta-------tc-tgt--c-t-t
i Eubalaena_japonica.EubJap_flattened_line_57114         I 6 C 0
s Felis_catus.CM001381.2                                 186250194 24 - 206538554 ca-a-----t------tacatttgtat--gcttt-t--t--------tt---------------------------------------------
i Felis_catus.CM001381.2                                 C 0 I 18
s Felis_catus_fca126.CM031415.1                          185120150 24 - 205367284 ca-a-----t------tacatttgtat--gcttt-t--t--------tt---------------------------------------------
i Felis_catus_fca126.CM031415.1                          C 0 I 18
s Felis_nigripes.FelNig_flattened_line_44075                   792 24 +     25330 ca-a-----t------tacatttgtat--gcttt-t--t--------tt---------------------------------------------
i Felis_nigripes.FelNig_flattened_line_44075             C 0 I 18
s Fukomys_damarensis.KN121974.1                            2925788 44 -   3816255 taaa-----t------taaacttgcat--gcct--tctt---------t---t-t----tc--ctatc----aa--ca------tgt--t-t-t
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                4754 41 -     28519 ca-a-----t------taaatttatat--acct--t--t---------t---t-c----tc--ttgtt----ta-------tc-tgt--c-t-t
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       1945 37 +    660261 ca-t-----t------taaaat----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------tc-tgt--c-t-t
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            4813 17 -      6791 ca-a-----t------tatacttggat--gc---------------------------------------------------------------
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_935316                                 764 41 +     34797 ca-a-----t------tacatgtgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Gorilla_beringei.k141_935316                           C 0 C 0
s Gorilla_gorilla.LT578341.1                                258854 41 - 186649187 ca-a-----t------tacatgtgtgt--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Gorilla_gorilla.LT578341.1                             I 81 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    6688 41 -     78134 ca-a-----t------tatatttgtat--gcct--t--t---------t--cc-t----t---ctgtt----at-------tc-tgt--t-t-t
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                33980 23 -    327341 ca-a-----t------tatatttgtgt--gcttt-t-tt-------------------------------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            I 8 I 17
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15612 37 +     48891 ca-t-----t------taaaat----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------tc-tgt--c-t-t
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938229 44 -  22651954 taaa-----t------taaacttacat--acct--tctt---------t---t-t----tc--ttgtt----aa-------tg-tgc--t-t-t
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               10999 37 -     36432 ta-a-----t------taaacttgtat--ttct--t--t---------t---t-c----tc------t----ta-------tc-tgt--c-t-t
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556045 41 -   1711038 ca-a-----t------taaatttgtat--atct--t--t---------t---t-c----tt--ctgtt----aa-------tt-tgt--c-t-t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_363447                414 41 +       852 ca-a-----t------taaatttgtat--atct--t--t---------t---t-c----tt--ctgtt----aa-------tt-tgt--c-t-t
i Hipposideros_galeritus.HipGal_scaffold_363447          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145323 41 -    630532 ca-a-----t------tacatgtgtgt--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73612 43 +     83186 ca-a-----t------tatatttgtat--gcttt-t-tt---------t---t-c----tt--ctgtt----ga-------tc-ttg--c-t-g
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 8 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75172 20 +    143317 ca-a-----t------taaacttgcat--tcct--t----------------------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 22
s Hylobates_agilis.k141_1155965                               8369 41 +     12352 ca-a-----c------tacatgtgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15556 41 +     55766 ca-a-----c------tacatgtgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055084 41 + 191637585 ca-a-----c------tacatgtgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7803962 41 +  11177569 ca-a-----c------tacatgtgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11009 41 -    135385 ca-a-----t------taaacatgtat--gctt--t--t---------t---c-c----cc--ctgtt----aa----cg----tat--t-t-t
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390250 41 +   7955117 aa-a-----t------taaatttgtat--gctt--t--t---------t---c-c----tc--cagtt----aa-------tc-tgt--t-t-t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13061 41 -     16823 ca-a-----t------taaatttgtat--tctt--t--t---------t---t-c----ta--ctgtt----ta-------tc-tgt--c-t-t
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 6 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 74901 42 -     97402 ca-a-----t------taaatttgtat--tattt-t--t---------t---t-c----tc--ctgtt----ta-------tc-tgt--c-t-t
i Kogia_breviceps.KogBre_flattened_line_3970             I 6 C 0
s Lagothrix_lagothricha.k141_246028                          45174 41 +    110728 ca-g-----t------tacatttgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-c-t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1139 41 -     25587 ca-a-----t------tacacttatat--gggt--t--t---------t---t-c----tt--ctata----ca-------tt-tgt--c-a-t
i Lasiurus_borealis.LasBor_scaffold_61236                I 1034 C 0
s Leontocebus_fuscicollis.k141_3470480                         650 41 -     23187 ca-a-----t------gacatttgtat--acct--t--t---------g---c-c----tc--tcatt----aatt--------ttt--g-t-t
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                            963 41 -     14280 ca-a-----t------gacatttgtat--acct--t--c---------g---c-c----tc--tcatt----aatt--------ttt--g-t-t
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         606 41 +      3713 ca-a-----t------gacatttgtat--acct--t--t---------g---c-c----tc--tcatt----aatt--------ttt--g-t-t
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      797 41 +      8855 ca-a-----t------tacattcatat--acct--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-g-t
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5599 41 -     13645 ca-a-----t------tacattcatat--acct--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-g-t
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816497 42 -   3914936 ca-a-----t------tatatttgtat--gcctt-t--t---------t---t-c----tt--ctgtc----aa-------tc-ttt--a-t-t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     21696 41 +     24238 ta-a-----c------caagttcgtat--tcct--t--t--------ct---c-t----c---atgtt----aa-------tc-tgt--c-t-t
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344243 41 +    662738 ca-a-----t------taaatttgtat--tctt--t--t---------t---t-c----tc--ctgtt----ta-------tc-tgt--c-t-t
i Lipotes_vexillifer.KE559953.1                          I 6 C 0
s Lophocebus_aterrimus.ctg367                               336595 40 -   1826925 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                41617909 42 +  59628241 ca-a-----t------tatatttgtat--gcctt-t--t---------t---t-c----tt--ctgtt----ga-------tc-ttt--c-t-t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              47987 40 -     61512 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375649 40 -  60120075 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27917 40 +     30207 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2755 40 -      5035 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27870 40 +     30527 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39046 40 -     50087 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48791 40 +     51645 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                417993 40 - 187317192 CA-A-----T------TACATGTGTAT--GC-T--T--T---------G---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402224 40 +  25927173 CA-A-----T------TACATGTGTAT--GC-T--T--T---------G---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51395 40 -     62418 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3926 40 +     14901 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47868 40 +     59329 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273775 40 +    668171 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2407 40 -      5049 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5573 40 +     17132 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226267 20 -    270270 ca-a-----t------tgagtttgcat--gcct--t----------------------------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 7 I 19
s Mandrillus_leucophaeus.scaffold280                        325063 40 +  24302211 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359894 40 -    752769 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676545 41 -    737560 ca-g-----t------taaatttgtgt--gccc--t--t---------t---t-c----tt--cagtc----aa-------tc-tgt--t-t-t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             223842 41 +    317179 ca-a-----t------taaatttgtat--gctc--t--t---------t---t-c----tt--cagtc----aa-------tc-tgt--t-t-t
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504479 41 +  40650429 aa-a-----t------taaatttatat--gctt--t--t---------t---c-c----tt--ctgtt----aa-------tc-cgt--t-t-t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       153670 41 +    207569 ca-a-----t------taaatttgtat--gcct--t--t---------t---t-c----tt--ctgtt----aa-------tt-tgt--c-t-t
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29249 25 -     74585 ca-g-----t------tatatttgtgt--gcctt-t--t---------t---t-t---------------------------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 10
s Mesoplodon_bidens.MesBid_scaffold_6114                     90527 41 +     93471 ca-a-----t------taaatatttat--tctt--t--t---------t---t-c----tc--ctgtt----ta-------tc-tgt--c-t-t
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 6 C 0
s Mico_argentatus.k141_582562                                12197 41 +     17804 cg-a-----t------tacatttgtat--acct--t--c---------g---c-c----tc--ttgtt----aatt--------tat--g-t-t
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12697 41 -     12984 cg-a-----t------tacatttgtat--acct--t--c---------g---c-c----tc--ttgtt----aatt--------tat--g-t-t
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21016 41 -     26561 cg-a-----t------tacatttgtat--acct--t--c---------g---c-c----tc--ttgtt----aatt--------tat--g-t-t
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188263 41 +    200668 ca-a-----t------taaacctgtat--gcct--t--t---------t---t-c----tt--ctctt----aa------ct--tgt--c-t-t
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 1
s Microtus_ochrogaster.CM001695.1                         15966488 16 +  27267610 TA-A-----G-------ATATTGGCTT--AT---------------------------------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 15
s Miniopterus_natalensis.LDJU01000034.1                    6368094 41 -   8254450 ca-a-----t------taaatttatat--gcct--t--t---------t---t-c----tt--ctata----aa-------tt-tgt--c-t-t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_23309             45825 41 -     48117 ca-a-----t------taaatttatat--gcct--t--t---------t---t-c----tt--ctata----aa-------tt-tgt--c-t-t
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 1
s Miopithecus_ogouensis.k141_1534655                         25157 40 -     27822 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11730 42 +     27589 ca-a-----t------tatatttgtat--gcctt-t--t---------t---t-c----tt--ctgtc----aa-------tc-ttt--a-t-t
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362635 41 +    437263 ca-a-----t------taaatttgtat--tctt--t--t---------t---t-c----tc--ctgtt----ta-------tc-tgt--c-t-t
i Monodon_monoceros.MonMon_M_scaffold_103                I 6 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182678 41 +    366855 ca-a-----t------taaatctatat--gcct--t--t---------t---t-c----tt--ctcca----aa------ct--tgt--c-t-t
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  31843 37 -     82753 ca-t-----t------taactt----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------tc-tgt--c-t-t
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21729 23 -     63510 ca-a-----t------tatatttgtgt--gcttt-t-tt-------------------------------------------------------
i Mungos_mungo.MunMun_flattened_line_18455               I 8 I 17
s Murina_feae.MurFea_scaffold_17764                          45068 43 +     47283 ca-a-----t------taaacttgtatacggct--t--t---------t---t-c----tt--ctatg----aa-------tt-tgt--c-t-t
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35597682 16 + 120012414 cc-a-----g-------aaagtgactt--gt---------------------------------------------------------------
i Mus_caroli.LT608237.1                                  C 0 I 15
s Mus_musculus.chr8                                       41691222 16 + 129401213 cc-a-----g-------aaagtggctt--gt---------------------------------------------------------------
i Mus_musculus.chr8                                      C 0 I 15
s Mus_pahari.LT608297.1                                   58219184 16 +  89631738 ct-a-----g-------aaagtggatt--gt---------------------------------------------------------------
i Mus_pahari.LT608297.1                                  C 0 I 15
s Mus_spretus.CM004101.1                                  39500141 16 + 130317789 cc-a-----g-------aaagtggctt--gt---------------------------------------------------------------
i Mus_spretus.CM004101.1                                 C 0 I 15
s Muscardinus_avellanarius.MusAve_scaffold_5560               2814 40 -    124358 ca-a-----t------taaacatgtat--gcct--t--t---------t---t-t----t---ctgtt----aa-------tc-tgt--c-t-t
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358124 25 +  14710649 ca-g-----t------tatatttatat--gcctt-t--t---------t---t-c---------------------------------------
i Mustela_putorius.JH418006.1                            C 0 I 10
s Myocastor_coypus.MyoCoy_scaffold_57531                       889 44 -     27262 ca-a-----t------tacacttgcat--gcct--tctt---------t---t-ta---cc--ctgtt----aa--ca------tgt--t-c-t
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797076 41 +  10118263 ca-a-----t------taaacttgtat--ggct--t--t---------t---t-c----tt--ctata----aa-------tt-tgt--c-t-t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391251 40 +   6019432 ca-a-----t------taaacatgtat--ggct--t--t---------t---t-c----tt--cta-a----aa-------tt-tgt--c-t-t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387289 41 +   4330536 ca-a-----t------taaacttgtat--ggct--t--t---------t---t-c----tt--ctata----aa-------tt-tgt--c-c-t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6076 41 +     18357 ca-a-----t------taaacttgtat--gact--t--t---------t---t-c----tt--ctata----aa-------tt-tgt--c-t-t
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950108 20 +   3037898 ---------------------------------------------------------------aagaa----ga--aaaggtt-tat--t-t-t
i Nannospalax_galili.KL204047.1                          I 16 C 0
s Nasalis_larvatus.k141_1350636                              31941 40 +     34575 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469177 42 -  31847680 ca-a-----t------tatatttgtat--gcctt-t--t---------t---t-c----tt--ctgtc----aa-------tc-ttt--a-t-t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235301 41 -   7148211 ca-a-----t------taaatttgtat--tctt--t--t---------t---t-c----tc--ctgtt----ta-------tc-tgt--c-t-t
i Neophocaena_asiaeorientalis.KZ687982.1                 I 6 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131011 36 -    149072 ta-a-----t-----------ttggat--gcct--t--t---------t---t-c----tt--ctctg----aa------ct--tgt--c-t-t
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56257 41 -    132029 ca-a-----t------tacatgtgtat--gctt--t--t---------g---c-c----tg--ttgtt----aatt--------ttt--g-t-t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12352 41 -     16345 ca-a-----t------tacatgtgtat--gctt--t--t---------g---c-c----tg--ttgtt----aatt--------ttt--g-t-t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18241 41 +     22201 ca-a-----t------tacatgtgtat--gctt--t--t---------g---c-c----tg--ttgtt----aatt--------ttt--g-t-t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416471 41 -  22158432 ca-a-----t------tacatgtgtat--gctt--t--t---------g---c-c----tg--ttgtt----aatt--------ttt--g-t-t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28646 41 -     54323 ca-a-----t------tacatgtgtat--gctt--t--t---------g---c-c----tg--ttgtt----aatt--------ttt--g-t-t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201613 42 +   9404916 ca-a-----t------tatacttgtat--gcctt-t--t---------t---t-c----tt--ctgtt----ga-------tc-ttt--c-t-t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059153 44 -  11899542 ca-a-----t------taaactttcat--gcct--tctt---------t---t-ta---tc--ctgtt----aa--ca------tgt--t-t-c
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1454946 42 +   2017862 ca-a-----t------tatatttgtat--gcctt-t--t---------t---t-c----tt--ctgtc----aa-------tc-ttt--a-t-t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442237 41 -    630418 ca-t-----t------taagtttgttt--tcct--t--t---------t---t-a----tc--ctatt----ta-------tc-tgt--c-t-t
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          21896 37 +    150152 ca-t-----t------taaaat----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------tc-tgt--c-t-c
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7659 16 -     41509 ---------------------------------------------------------------gagaa----ga------ct--gat--ttt-t
i Onychomys_torridus.OnyTor_scaffold_28377               I 16 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97104 16 -    140218 ca-a-----g-------atattggctt--at---------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 13
s Orcinus_orca.KB316932.1                                  8105705 42 +  10937097 ca-a-----t------taaatttgtat--tctt--t-tt---------t---t-c----tc--ctgtt----ta-------tc-tgt--t-t-t
i Orcinus_orca.KB316932.1                                I 6 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108357 41 - 174332312 ta-a-----c------caagttcgtat--tcct--t--t--------ct---c-t----c---atgtt----aa-------tc-tgt--c-t-t
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42568 38 +    559221 ca-a-----t------tatatttgtat--gcctt-t--t---------t---t-c----tt--ctgtt----ga-------tc-tt--------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26410638 37 -  44047080 ca-t-----t------taaaat----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------tc-tgt--c-t-t
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11261 37 +     17875 ca-t-----t------taaaat----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------tc-tgt--c-t-t
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  213 41 +      1186 CA-A-----T------TACATGTGTGT--GCTT--T--T---------G---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1476833 41 - 189151597 CA-G-----T------TACATGTGTGT--GCTT--T--T---------G---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   28196 42 -    230217 ca-a-----t------tacatttgtat--gcttt-t--t---------t---t-c----tt--ctgtt----ga------ct--ttt--c-t-t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465428 42 -  18783137 ca-a-----t------tacatttgtat--gcttt-t--t---------t---t-c----tt--ctgtt----ga------ct--ttt--c-t-t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976029 42 +   8748460 ca-a-----t------tacatttgtat--gcttt-t--t---------t---t-c----tt--ctgtt----ga------ct--ttt--c-t-t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622156 37 +   2937107 ca-t-----t------taaaat----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------tc-tgt--c-t-t
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246072 40 - 183742232 CA-A-----T------TACATGTGTAT--GC-T--T--t---------g---c-c----tt--ttgtt----aatt--------ttt--g-t-t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12357 40 +     21308 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tt--ttgtt----aatt--------ttt--g-t-t
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295100 40 -  20919399 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tt--ttgtt----aatt--------ttt--g-t-t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  24997 40 -     27687 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tt--ttgtt----aatt--------ttt--g-t-t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1676 40 +     10553 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tt--ttgtt----aatt--------ttt--g-t-t
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1636 40 -     10386 ca-a-----t------tacatgtgtat--gc-t--t--t---------g---c-c----tt--ttgtt----aatt--------ttt--g-t-t
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18366 25 +     78924 ca-a-----t------tatatttgtat--gcctt-t-tt---------a---t-----------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 8 I 17
s Perognathus_longimembris.PerPac_flattened_line_89005        7244 37 +      9367 ---A-----T------TAAACTCATAT--GACA--T--TACCTCCTGTT---A-T----TT--TTTG---------------------------
i Perognathus_longimembris.PerPac_flattened_line_89005   I 1 I 4
s Peromyscus_maniculatus.KI615324.1                         250879 15 +  18517816 ---------------------------------------------------------------AAGAA----AA-------TT-GAT--T-T-T
i Peromyscus_maniculatus.KI615324.1                      I 16 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35243 46 -     56120 taga-----t------taaacttgcac--acat--tctt---------t---t-t----ttttcttta----aa--ca------tgt--t-t-t
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7227 41 -     63832 ca-a-----t------taaatttgtat--tctt--t--t---------t---t-c----tc--ctgtt----ta-------tc-tgt--c-t-t
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 6 C 0
s Piliocolobus_badius.k141_2704958                            5319 40 +     55023 ca-a-----t------tacatgcgtat--gc-t--t--t---------a---c-c----tc--tggtt----aatt--------ttt--g-t-t
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4841 40 -     89929 ca-a-----t------tacatgcgtat--gc-t--t--t---------a---c-c----tc--tggtt----aatt--------ttt--g-t-t
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5431 40 +     40849 ca-a-----t------tacatgcgtat--gc-t--t--t---------a---c-c----tc--tggtt----aatt--------ttt--g-t-t
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257161 40 +  14605196 CA-A-----T------TACATGCGTAT--GC-T--T--T---------A---c-c----tc--tggtt----aatt--------ttt--g-t-t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7570 41 +     22231 ca-a-----t------taagcttgtat--gggt--t--t---------t---t-c----tt--ctata----aa-------tt-tgt--c-t-t
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66699 41 +    207309 ca-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7792 41 -     25401 ca-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33540 41 +     58159 ca-a-----t------tacatttgttt--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33816 41 +     63561 ca-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33571 41 +     51148 ca-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558546 41 -   4542175 ca-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33555 41 +     51125 ca-a-----t------tacatttgttt--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4248 41 +     19503 ca-a-----t------taaatttgttt--tctt--t--t---------t---t-c----tc--ctgtt----ta-------tc-tgt--c-t-t
i Platanista_gangetica.PlaMin_flattened_line_83166       I 6 C 0
s Plecturocebus_bernhardi.k141_2549090                        9977 41 +     39866 ga-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5059 41 -      9282 ga-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44463 41 -     87950 ga-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44857 41 -     88961 ga-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9555 41 -     39403 ga-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44506 41 +     87928 ga-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9554 41 -     60166 ga-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16475 41 -     67232 ga-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44407 41 -     90634 ga-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45874 41 +     89403 ga-a-----t------tacatttgtat--acct--t--t---------g---c-c----tc--ttgtc----aatt--------ttt--g-t-t
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182018 41 - 189387572 CA-A-----T------TACATGTGTAT--GCTT--T--T---------G---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196761 41 -   9816681 ca-a-----t------tacatgtgtat--gctt--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30521 40 +     69807 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47702 40 -     80239 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55348 39 -     66298 ca-a-----t------taaatctg--t--gcct--t--t---------t---t-c----tt--ctcta----aa------ct--tgt--c-t-t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7734 25 -     18639 ca-g-----t------tatatttgtat--gcctt-t--t---------t---t-t---------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 10
s Pteropus_alecto.KB030862.1                               5843885 20 -  28871421 ca-a-----t------taaatttgcat--gcct--t----------------------------------------------------------
i Pteropus_alecto.KB030862.1                             I 7 I 19
s Pteropus_vampyrus.KN525825.1                             3540401 20 -   4952924 ca-a-----t------taaatttgcat--gcct--t----------------------------------------------------------
i Pteropus_vampyrus.KN525825.1                           I 7 I 19
s Puma_concolor.QAVW01001104.1                            18102417 43 +  38429054 ca-a-----t------tacctttgtat--gcttt-t--t--------tt---t-c----tt--ctgtt----ga------ct--ttt--c-t-t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29888 40 +     91421 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156440 40 -   7812017 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10740 40 +     72585 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4757 39 -     55207 ca-t-----t------taagtttgttt--tcct--t--t---------t---t-a----tc--ctatt----ta----------tgt--c-t-t
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37025818 14 -  90668790 ---------------------------------------------------------------tggaa----g---a---ct--tat--t-t--
i Rattus_norvegicus.chr16                                I 16 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2917811 41 +   3329780 ca-a-----t------taaatttgtat--actt--t--t---------t---t-c----tt--ctgtt----ag-------tt-ttt--c-t-t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4346 40 +      7119 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125016 40 + 195417433 CA-A-----T------TACATGCGTAT--GC-T--T--T---------G---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239188 40 -   7961872 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78379 20 -    116970 ca-a-----t------taaatttgcat--gcct--t----------------------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 7 I 19
s Saguinus_bicolor.k141_161125                                9141 41 +     12412 ca-a-----a------gacattcgtat--acct--t--t---------g---c-c----tc--tcatt----aatc--------ttt--g-t-t
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               602 38 +      9876 ca-a-----t------gacattcgtat--acct--t--t---------g---c-c----tc--tcatt----aatc--------ttt-------
i Saguinus_geoffroyi.k141_356064                         C 0 I 1
s Saguinus_imperator.k141_2710097                            16205 41 -     24931 CA-A-----T------GACATTCGTAT--ACCT--T--T---------G---C-C----TC--TCATT----AATT--------TTT--G-T-T
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1085 41 +      4564 ca-a-----t------gacattcgtat--acct--t--t---------g---c-c----tc--tcatt----aatt--------ttt--g-t-t
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3890 41 -      7443 ca-a-----t------gacattcgtat--acct--t--t---------g---c-c----tc--tcatt----aatt--------ttt--g-t-t
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394795 41 - 209938924 ca-a-----a------gacattcgtat--acct--t--t---------g---c-c----tc--tcatt----aatc--------ttt--g-t-t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1505 41 +     10149 ca-a-----t------gacattcgtat--acct--t--t---------g---c-c----tc--tcatt----aatt--------ttt--g-t-t
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                845 38 +     10417 ca-a-----t------gacattcgtat--acct--t--t---------g---c-c----tc--tcatt----aatc--------ttt-------
i Saguinus_oedipus.k141_1368863                          C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_39512                       14208 37 +     16473 ct-t-----t------taaatt----t--tcct--t--t---------t---t-c----tc--ctatt----ta-------tc-tgt--c-t-t
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1110974 41 + 121099817 CA-A-----T------TACATTTGTGT--ACCT--T--T---------G---c-c----tc--ttgct----aatt--------ttt--g-t-t
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32541 41 -     47369 ca-a-----t------tacatttgtgt--acct--t--t---------g---c-c----tc--ttgct----aatt--------ttt--g-t-t
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32927 41 -     79414 CA-A-----T------TACATTTGTGT--ACCT--T--T---------G---C-C----TC--TTGCT----AATT--------TTT--G-T-T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29618 41 -     34454 CA-A-----T------TACATTTGTGT--ACCT--T--T---------G---C-C----TC--TTGCT----AATT--------TTT--G-T-T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17019 41 -     22428 CA-A-----T------TACATTTGTGT--ACCT--T--T---------G---C-C----TC--TTGCT----AATT--------TTT--G-T-T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32173 41 -     47109 ca-a-----t------tacatttgtgt--acct--t--t---------g---c-c----tc--ttgct----aatt--------ttt--g-t-t
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240198 41 +   5703754 ca-a-----t------tacatttgtat--atct--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9788 41 +     21866 ca-a-----t------tacatttgtat--atct--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122241 18 +    313613 ------------------------------------------------------c----tc--ctatt----aa-------tt-tgt--c-t-t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 19 C 0
s Semnopithecus_entellus.k141_583282                          1327 40 +     11297 ca-g-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31720 40 +     58920 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18218 40 -     45317 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25876 40 -     42441 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28552 40 -     29113 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31629 40 -     48123 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52648 16 +     77746 ca-a-----g-------aaactggctc--at---------------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 15
s Solenodon_paradoxus.SolPar_flattened_line_126            1867011 34 -   1910179 ca-g-----t------ta------tgt--g-ct--g--t---------t---t-c----tc--ctgtt----aa--ca------tct--t-t-t
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674251 49 +  18376816 ta-a-----acattagtgagattatat--atat--t--g---------g---t-c----tc--caatt----aa-----tctg-tta--t-a-t
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1871820 41 +   3870691 aa-a-----t------taaatttgtat--gttt--t--t---------t---c-c----tc--ctgtt----aa-------tc-tgt--t-t-t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             15950 42 -     97271 ca-c-----t------tatatttgtat--gcatt-t--t---------t---t-c----tt--ttgtc----ca-------tc-ttt--a-t-t
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128577 24 +    196729 ca-a-----t------tatatttgtgt--gcttttt-tt-------------------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 8 I 17
s Sus_scrofa.CM000828.4                                    6647837 41 +  69701581 ca-a-----c------taaatttgcat--tctt--t--t---------t---t-c----tc--ctgtt----aa-------tc-tgt--t-t-t
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393728 41 +   1523678 ca-a-----t------tacatgtgtat--gcta--t--t---------g---c-c----tg--ttgtt----aatt--------ttt--g-t-t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17299 41 +     22964 ca-a-----t------taaatttgtat--gcct--t--t---------t---t-c----tt--ctata----aa-------tt-tgt--c-t-t
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194678 41 +    199430 ca-g-----t------taaatttgtat--gcat--t--t---------t---t-c----tt--ctgtt----aa-------tc-tgt--c-t-t
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108658 41 -    539355 ca-g-----t------taaatttgtat--gcat--t--t---------t---t-c----tt--ctgtt----aa-------tc-tgt--c-t-t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4287 41 +      9917 ca-a-----t------taaatttgtat--gcct--t--t---------g---t-c----tc--ttatt----aatt--------tgt--c-t-t
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11083 41 +     20590 ca-a-----t------taaatttgtat--gcct--t--t---------t---t-c----tc--ttatt----aatt--------tgt--c-t-t
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355881 40 - 186847797 CA-A-----T------TACATGTGTAT--GC-T--T--T---------G---C-C----TC--CTGtt----aatt--------ttt--g-t-t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27523 44 -     33621 taga-----t------taaacttgcat--gcct--tctt---------t---t-t----tt--ctgta----aa--ca------tgt--t-t-t
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483606 33 -    610378 ca-a-----t------taaacctgtgt--gcct--t--t---------t---t-c----tt--ttcta----aa--------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_1189070                        23628 40 +     26378 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36427 40 -     78344 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22953 40 +     25722 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31383 40 -     62838 ca-a-----t------tacatgcatat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31374 40 +     46913 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12111 40 -     28527 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33314 40 -     64340 ca-a-----t------tacatgcatat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31352 40 -     63452 ca-a-----t------tacatgcatat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12803 40 +     22490 ca-a-----t------tacatgcatat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          769 40 +      9911 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          564 40 -     33539 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258323 40 -   6242583 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4342 40 +     19340 ca-a-----t------tacatgcgtat--gc-t--t--t---------g---c-c----tc--ttgtt----aatt--------ttt--g-t-t
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177465 41 -    200418 ca-c-----t------taaatttgttt--cccc--t--t---------t---t-c----tc--ctgtt----ta-------tc-tgt--c-t-c
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839237 39 -   4065304 ca-a-----t------tcagtgtgtaa--gcct--t--t---------t---t-c----tc--ctatt----aa-------t---gt--c-a-t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13329 41 -     70247 ca-a-----t------tcaatttgcaa--acct--c--t---------t---t-c----tc--ctatt----aa-----tct---gt--c-t-t
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17368830 41 -  33153633 ca-a-----t------taaatttgtat--tctt--t--t---------t---t-c----tc--ctgtt----ta-------tc-tgt--t-t-t
i Tursiops_truncatus.MRVK01000835.1                      I 6 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7065 41 -     21056 ta-a-----a------acaattcatat--gata--t--t---------t---t-c----tc--ctgtt----aa-------tt-tgt--g-t-t
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185149 46 +   5085361 ca-a-----t------tatatttgtat--gcctt-t--t---------t---t-caaaatt--ttgtc----ga-------tc-ttt--a-t-t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   79361 42 +   5488506 ca-a-----t------taaatttatat--ttctt-t--t---------t---c-c----tc--ctgtt----aa-------tc-tgt--c-t-t
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108507 42 -    112863 ca-a-----t------tatatttgtat--gcctt-t--t---------t---t-c----tt--ctgtt----ga-------tc-ttt--c-t-t
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        177701 41 -    224448 aa-a-----t------taaatttgtat--gctt--t--t---------t---c-c----tc--ctgct----aa-------tc-tat--t-t-t
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32153 42 -     86975 ca-a-----t------tatatttgtat--gcctt-t--t---------t---t-c----tt--ctgtc----aa-------tc-ttt--a-t-t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       3940 17 -     63895 ca-a-----g------taaatttgtat--at---------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 9
s Ziphius_cavirostris.ZipCav_flattened_line_334639             791 41 +      3447 ca-a-----t------taaatatttat--tctt--t--t---------t---t-c----tc--ctgtt----ta-------tc-tgt--c-t-t
i Ziphius_cavirostris.ZipCav_flattened_line_334639       I 6 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_510450               1901 278 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    49396 73 +    145209 I
e Echinops_telfairi.JH980293.1                            62858214 80 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               2589 223 +     11607 I
e Elephantulus_edwardii.JH947257.1                         9113279 68 -  10337057 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            609346 87 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                 1866 90 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   22296 79 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2112554 81 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            15196 81 -     19938 I
e Trichechus_manatus.JH594705.1                            6485301 82 -  10818551 I
e Psammomys_obesus.NESX01036366.1                            40656  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_128773                 2495 82 -     12774 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53122  0 -    140813 C
e Loxodonta_africana.GL010049.1                           39087697 84 +  43346337 I
e Jaculus_jaculus.JH725527.1                               1242424 337 +   9596543 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                5963 82 +      8654 I
e Allactaga_bullata.AllBul_scaffold_20030                    20875 333 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28723  2 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9724  9 +     36723 GC--TGTT---------G-T--T
s Allenopithecus_nigroviridis.k141_3755588                   50670  9 +     53615 gc--tgtt---------g-t--t
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2697  9 +     13857 gc--tgtt---------g-t--t
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19252  9 -     21945 ac--tgtt---------g-t--t
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20937  9 +     32033 ac--tgtt---------g-t--t
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74194 12 -     84148 gc--g---gttttt---t-t--t
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46432 12 -     78289 gt--g---gttttt---t-t--t
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45859 15 +     55831 gc--g---gttttttttt-t--t
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44322 14 -     64179 gcggt----tttttt--t-t--t
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1430 13 -      3959 g---t---gttttt---t-tttt
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42947 14 +     45454 gc--g---gttttt---t-tttt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48596 12 +     70886 gc--g---gtttt---gt-t--t
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10769 11 +     30854 gc--g---gtttt----t-t--t
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34903 13 +     42133 gcg-t----tttttt--t-t--t
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    3142  6 +     17741 gc--t------------g-t--t
i Aotus_azarae.k141_887050                               C 0 I 9
s Aotus_griseimembra.k141_3192254                             3767  6 -     15923 gc--t------------g-t--t
i Aotus_griseimembra.k141_3192254                        C 0 I 9
s Aotus_nancymaae.KZ198451.1                                674049  6 +   5030052 GC--t------------g-t--t
i Aotus_nancymaae.KZ198451.1                             C 0 I 9
s Aotus_trivirgatus.k141_318729                               4043  6 -     16391 gc--t------------g-t--t
i Aotus_trivirgatus.k141_318729                          C 0 I 9
s Aotus_vociferans.k141_1514463                               3602  6 -     17186 gc--t------------g-t--t
i Aotus_vociferans.k141_1514463                          C 0 I 9
s Ateles_geoffroyi_b.tarseq_1536                               276664 12 +  21539123 gc--t---gtttt---gt-t--t
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12830 12 +     48076 gc--t---gtttt---gt-t--t
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7965 12 -     28759 gc--t---gtttt---gt-t--t
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35521 12 +     44353 gc--t---gtttt---gt-t--t
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50890 12 -     71267 gc--t---gtttt---gt-t--t
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24948 12 -     33135 gc--t---gtttt---gt-t--t
i Ateles_paniscus.k141_866194                            C 0 C 0
s Cacajao_ayresi.k141_96119                                   9755  8 +     28062 gc--t----tt------t-t--t
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45049  6 -     91139 gc--t------------t-t--t
i Cacajao_calvus.k141_89051                              C 0 I 4
s Cacajao_hosomi.k141_81245                                  22575  6 +     95584 gc--t------------t-t--t
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22488  6 +    119600 gc--t------------t-t--t
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12139  5 +     18648 gc--c------------g-g---
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11644  6 -     13885 gc--t------------g-t--t
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3744  5 -      8861 gc--t------------g-t---
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456137  5 + 189096842 GC--T------------g-T---
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 2
s Callithrix_kuhlii.k119_102356                               3658  5 +      8664 gc--t------------g-t---
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Cebuella_niveiventris.k141_592277                           7057  5 -     12580 gc--t------------g-t---
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45115  5 +     53515 gc--t------------g-t---
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  373031  6 -  26074798 gc--t------------g-t--t
i Cebus_albifrons.Contig27                               T 2818 I 2817
s Cebus_olivaceus.k141_1404781                                9919  6 -     34880 gc--t------------g-t--t
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69015  6 -     89041 gc--t------------g-t--t
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cercocebus_atys.KQ010504.1                                143753  9 -   4669795 gc--tgtt---------g-t--t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47492  9 +     47900 gc--tgtt---------g-t--t
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2925  9 -     14410 gc--tgtt---------g-t--t
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47307  9 -    148725 gc--tgtt---------g-t--t
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29585  9 -     40656 gc--tgtt---------g-t--t
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9544  9 +     20796 gc--tgtt---------g-t--t
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14658  8 -     17524 gc--tg-t---------g-t--t
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30390  9 -     34525 gc--tgtt---------g-t--t
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14168  9 -     25376 gc--tgtt---------g-t--t
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366757  9 -  39242232 gc--tgtt---------g-t--t
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272482  9 +  21565898 gc--tgtt---------g-t--t
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34849  9 -     45857 gc--tgtt---------g-t--t
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29750  9 -     32606 gc--tgtt---------g-t--t
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5911  9 +      8499 gc--tgtt---------g-t--t
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28310  9 +     70610 gc--tgtt---------g-t--t
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25272  9 +     36323 gc--tgtt---------g-t--t
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10844  9 -     32913 gc--tgtt---------t-t--t
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21257  9 -     40346 gc--tgtt---------t-t--t
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21512  9 +    216457 gc--tgtt---------t-t--t
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21301  9 +     39636 gc--tgtt---------t-t--t
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33286  7 -     52013 gc--t---g--------t-t--t
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44389  6 -    112038 gc--t------------t-t--t
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9940  6 +     34062 gc--t------------t-t--t
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346172  9 +  18827391 ac--tgtt---------g-t--t
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12711  9 -     44032 ac--tgtt---------g-t--t
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307558  9 - 135778131 ac--tgtt---------g-t--t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411966  9 -   2368649 gc--tgtt---------g-t--t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381848  9 - 200372422 gc--tgtt---------g-t--t
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5400  9 -     84244 gc--tgtt---------g-t--t
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                               265700  9 +  21539334 ac--tgtt---------g-t--t
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_935316                                 805  9 +     34797 gc--tgtt---------g-t--t
i Gorilla_beringei.k141_935316                           C 0 I 10
s Gorilla_gorilla.LT578341.1                                258895  9 - 186649187 gc--tgtt---------g-t--t
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Hoolock_leuconedys.ctg274                                    145364  9 -    630532 gc--tgtc---------g-t--t
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               8410  9 +     12352 gc--tgtt---------g-t--t
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15597  9 +     55766 gc--tgtt---------g-t--t
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055125  9 + 191637585 gc--tgtt---------g-t--t
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804003  9 +  11177569 gc--tgtt---------g-t--t
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45215 11 +    110728 gc--t---gtttt----t-t--t
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                         691  6 -     23187 gc--t------------g-t--t
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1004  6 -     14280 gc--t------------g-t--t
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         647  6 +      3713 gc--t------------g-t--t
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      838  6 +      8855 gc--t------------g-t--t
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5640  6 -     13645 gc--t------------g-t--t
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lophocebus_aterrimus.ctg367                               336635  9 -   1826925 gc--tgtg---------g-t--t
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              48027  9 -     61512 gc--tgtt---------g-t--t
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375689  9 -  60120075 gc--tgtt---------g-t--t
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27957  9 +     30207 gc--tgtt---------g-t--t
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2795  9 -      5035 gc--tgtt---------g-t--t
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27910  9 +     30527 gc--tgtt---------g-t--t
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39086  9 -     50087 gc--tgtt---------g-t--t
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48831  9 +     51645 gc--tgtt---------g-t--t
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418033  9 - 187317192 gc--tgtt---------g-t--t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402264  9 +  25927173 gc--tgtt---------g-t--t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51435  9 -     62418 gc--tgtt---------g-t--t
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3966  9 +     14901 gc--tgtt---------g-t--t
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47908  9 +     59329 gc--tgtt---------g-t--t
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273815  9 +    668171 gc--tgtt---------g-t--t
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2447  9 -      5049 gc--tgtt---------g-t--t
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5613  9 +     17132 gc--tgtt---------g-t--t
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325103  9 +  24302211 gc--tgtt---------g-t--t
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359934  9 -    752769 gc--tgtt---------g-t--t
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_582562                                12238  5 +     17804 gc--t------------g-g---
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12738  5 -     12984 gc--t------------g-g---
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21057  5 -     26561 gc--t------------g-g---
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25197  9 -     27822 gc--tgtt---------g-t--t
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Nasalis_larvatus.k141_1350636                              31981  9 +     34575 gc--tgtt---------g-t--t
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           56298  9 -    132029 gc--tgtt---------g-t--t
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12393  9 -     16345 gc--tgtt---------g-t--t
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18282  9 +     22201 gc--tgtt---------g-t--t
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416512  9 -  22158432 gc--tgtt---------g-t--t
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28687  9 -     54323 gc--tgtt---------g-t--t
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  254  9 +      1186 gc--tgtt---------g-t--t
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1476874  9 - 189151597 gc--tgtt---------g-t--t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   246112  9 - 183742232 gc--tGTG---------G-T--T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12397  9 +     21308 gc--tgtg---------g-t--t
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295140  9 -  20919399 gc--tgtg---------g-t--t
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25037  9 -     27687 gc--tgtg---------g-t--t
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1716  9 +     10553 gc--tgtg---------g-t--t
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1676  9 -     10386 gc--tgtg---------g-t--t
i Papio_ursinus.k141_5784434                             C 0 C 0
s Piliocolobus_badius.k141_2704958                            5359  9 +     55023 gc--tgtt---------g-t--t
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4881  9 -     89929 gc--tgtt---------g-t--t
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5471  9 +     40849 gc--tgtt---------g-t--t
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257201  9 +  14605196 gc--tgtt---------g-t--t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66740  6 +    207309 gc--t------------t-t--t
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7833  6 -     25401 gc--t------------t-t--t
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33581  6 +     58159 gc--t------------t-t--t
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33857  6 +     63561 gc--t------------t-t--t
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33612  6 +     51148 gc--t------------t-t--t
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558587  6 -   4542175 gc--t------------t-t--t
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33596  6 +     51125 gc--t------------t-t--t
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10018  9 +     39866 gc--tggg---------t-t--t
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 1
s Plecturocebus_brunneus.k141_862875                          5100  9 -      9282 gc--tggg---------t-t--t
i Plecturocebus_brunneus.k141_862875                     C 0 I 1
s Plecturocebus_caligatus.k141_1382851                       44504  9 -     87950 gc--tggg---------t-t--t
i Plecturocebus_caligatus.k141_1382851                   C 0 I 7
s Plecturocebus_cinerascens.k141_1164729                     44898  9 -     88961 gc--tggg---------t-t--t
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 1
s Plecturocebus_cupreus.k141_2351393                          9596  9 -     39403 gc--tggg---------t-t--t
i Plecturocebus_cupreus.k141_2351393                     C 0 I 1
s Plecturocebus_dubius.k141_1058799                          44547  9 +     87928 gc--tggg---------t-t--t
i Plecturocebus_dubius.k141_1058799                      C 0 I 1
s Plecturocebus_grovesi.k141_2013005                          9595  9 -     60166 gc--tggg---------t-t--t
i Plecturocebus_grovesi.k141_2013005                     C 0 I 1
s Plecturocebus_hoffmannsi.k141_3303950                      16516  9 -     67232 gc--tggg---------t-t--t
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 1
s Plecturocebus_miltoni.k141_349282                          44448  9 -     90634 gc--tggg---------t-t--t
i Plecturocebus_miltoni.k141_349282                      C 0 I 1
s Plecturocebus_moloch.k141_1031110                          45915  9 +     89403 gc--tggg---------t-t--t
i Plecturocebus_moloch.k141_1031110                      C 0 I 1
s Pongo_abelii.CM009266.2                                   182059  9 - 189387572 gc--tgtt---------g-t--t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196802  9 -   9816681 gc--tgtt---------g-t--t
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30561  9 +     69807 gc--tgtt---------g-t--t
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47742  9 -     80239 gc--tgtt---------g-t--t
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29928  9 +     91421 gc--tgtt---------c-t--t
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156480  9 -   7812017 gc--tgtt---------c-t--t
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10780  9 +     72585 gc--tgtt---------c-t--t
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4386  9 +      7119 gc--tgtt---------g-t--t
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125056  9 + 195417433 gc--tgtt---------g-t--t
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239228  9 -   7961872 gc--tgtt---------g-t--t
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_161125                                9182  6 +     12412 gc--t------------g-t--t
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               641  6 +      9876 gc--t------------g-t--t
i Saguinus_geoffroyi.k141_356064                         I 1 C 0
s Saguinus_imperator.k141_2710097                            16246  6 -     24931 GC--T------------G-T--T
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1126  6 +      4564 gc--t------------g-t--t
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3931  6 -      7443 gc--t------------g-t--t
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394836  6 - 209938924 gc--t------------g-t--t
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1546  6 +     10149 gc--t------------g-t--t
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                884  6 +     10417 gc--t------------g-t--t
i Saguinus_oedipus.k141_1368863                          I 1 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111015  6 + 121099817 gc--t------------t-t--t
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 1
s Saimiri_cassiquiarensis.k141_1467335                       32582  6 -     47369 gc--t------------t-t--t
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32968  6 -     79414 GC--T------------T-T--T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29659  6 -     34454 GC--T------------T-T--T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17060  6 -     22428 GC--T------------T-T--T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32214  6 -     47109 gc--t------------t-t--t
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240239  6 +   5703754 gc--t------------g-t--t
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9829  7 +     21866 gc--t------------gtt--t
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                          1367  9 +     11297 gc--tgtt---------g-t--t
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31760  9 +     58920 gc--tgtt---------g-t--t
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18258  9 -     45317 gc--tgtt---------g-t--t
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25916  9 -     42441 gc--tgtt---------g-t--t
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28592  9 -     29113 gc--tgtt---------g-t--t
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31669  9 -     48123 gc--tgtt---------g-t--t
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393769  9 +   1523678 gc--tgtt---------g-t--t
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                           355921  9 - 186847797 gc--tgtt---------g-t--t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23668  9 +     26378 gc--tgtt---------g-t--t
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36467  9 -     78344 gc--tgtt---------g-t--t
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       22993  9 +     25722 gc--tgtt---------g-t--t
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31423  9 -     62838 gc--tgtt---------g-t--t
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31414  9 +     46913 gc--tgtt---------g-t--t
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12151  9 -     28527 gc--tgtt---------g-t--t
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33354  9 -     64340 gc--tgtt---------g-t--t
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31392  9 -     63452 gc--tgtt---------g-t--t
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12843  9 +     22490 gc--tgtt---------g-t--t
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          809  9 +      9911 gc--tgtt---------g-t--t
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          604  9 -     33539 gc--tgtt---------g-t--t
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258363  9 -   6242583 gc--tgtt---------g-t--t
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4382  9 +     19340 gc--tgtt---------g-t--t
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
e Fukomys_damarensis.KN121974.1                            2925832  0 -   3816255 C
e Myocastor_coypus.MyoCoy_scaffold_57531                       933  0 -     27262 C
e Sorex_araneus.JH798187.1                                 4674300  0 +  18376816 C
e Erinaceus_europaeus.JH835339.1                           3671228  0 +   7059049 C
e Crocidura_indochinensis.CroInd_scaffold_77846              12275  0 +     12657 C
e Capromys_pilorides.CapPil_scaffold_26391                    1868  0 -     20114 C
e Nannospalax_galili.KL204047.1                             950128  0 +   3037898 C
e Dasyprocta_punctata.DasPun_flattened_line_15900            31467  0 +     75252 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450               1901 278 -      4087 I
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              27567  0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     35289  0 -     56120 C
e Perognathus_longimembris.PerPac_flattened_line_89005        7281  4 +      9367 I
e Octodon_degus.JH651603.1                                11059197  0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75192 22 +    143317 I
e Heterocephalus_glaber.JH602082.1                         1938273  0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 12576 22 +     14636 I
e Dipodomys_stephensi.DipSte_scaffold_89095                   9993  4 -     10735 I
e Dipodomys_ordii.KN672350.1                              18955079  4 -  37912305 I
e Cuniculus_paca.CunPac_flattened_line_7025                  12026  0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  22538  0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_23560                       66336 21 -     66877 I
e Cavia_porcellus.DS562891.1                               5003259 21 +  23407841 I
e Cavia_aperea.AVPZ01000300.1                              4999818 21 +  23392119 I
e Microgale_talazaci.MicTal_scaffold_6613                    49396 73 +    145209 I
e Echinops_telfairi.JH980293.1                            62858214 80 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               2589 223 +     11607 I
e Elephantulus_edwardii.JH947257.1                         9113279 68 -  10337057 I
e Desmodus_rotundus.KZ672289.1                            11868724  0 -  20541912 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            609346 87 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                 1866 90 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   22296 79 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2112554 81 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            15196 81 -     19938 I
e Lepus_americanus.LepAme_scaffold_56121                     21737  0 +     24238 C
e Carollia_perspicillata.CarPer_scaffold_107871               3732  0 +      9923 C
e Tupaia_tana.TupTan_flattened_line_394                      13370  0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1839276  0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         32195  0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                108549  0 -    112863 C
e Ursus_maritimus.KK499267.1                                185195  0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             15992  0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          7759 10 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        42606  0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1454988  0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                201655  0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11469219  0 -  31847680 C
e Mustela_putorius.JH418006.1                             14358149 10 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046        11772  0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             29274 10 -     74585 I
e Lycaon_pictus.CM007581.1                                41617951  0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        816539  0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24925222 10 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45110377  0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41618796  0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          225659  0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    12318  0 -     23171 C
e CanFam4.chr16                                           42508683  0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  8858  0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            218740  0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20418739  0 +  29979442 C
e Ziphius_cavirostris.ZipCav_flattened_line_334639             832  0 +      3447 C
e Zapus_hudsonius.ZapHud_scaffold_11398                       3957  9 -     63895 I
e Xerus_inauris.XerIna_scaffold_2302                        177742  0 -    224448 C
e Vicugna_pacos.KN270157.1                                   79403  0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    7106  0 -     21056 C
e Tursiops_truncatus.MRVK01000835.1                       17368871  0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6485301 82 -  10818551 I
e Tragulus_javanicus.TraJav_scaffold_3462                   177506  0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    483639  3 -    610378 I
e Tarsius_wallacei.k141_226975                               11124  0 +     20590 C
e Tarsius_lariang.k141_1733899                                4328  0 +      9917 C
e Tapirus_terrestris.TapTer_scaffold_755                    108699  0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      194719  0 +    199430 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                17340  0 +     22964 C
e Sus_scrofa.CM000828.4                                    6647878  0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             128601 17 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1871861  0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1867045  0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    52664 15 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    122259  0 +    313613 C
e Saiga_tatarica.SaiTat_scaffold_39512                       14245  0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78399 19 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2917852  0 +   3329780 C
e Rattus_norvegicus.chr16                                 37025832  0 -  90668790 C
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4796  0 -     55207 C
e Puma_concolor.QAVW01001104.1                            18102460  0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3540421 19 -   4952924 I
e Pteropus_alecto.KB030862.1                               5843905 19 -  28871421 I
e Pteronotus_parnellii.KE847780.1                            55387  0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            40656  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_128773                 2495 82 -     12774 I
e Platanista_gangetica.PlaMin_flattened_line_83166            4289  0 +     19503 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             7611  0 +     22231 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               7268  0 -     63832 C
e Peromyscus_maniculatus.KI615324.1                         250894  0 +  18517816 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18391 17 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1622193  0 +   2937107 C
e Panthera_tigris.KE722367.1                               3976071  0 +   8748460 C
e Panthera_pardus.KV860321.1                              18465470  0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   28238  0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                      11298  0 +     17875 C
e Ovis_aries.CM001607.2                                   26410675  0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107108398  0 - 174332312 C
e Orcinus_orca.KB316932.1                                  8105747  0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    7675  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    97120 13 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          21933  0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         442278  0 -    630418 C
e Noctilio_leporinus.NocLep_scaffold_7894                   131047  0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1235342  0 -   7148211 C
e Myotis_myotis.MyoMyo_scaffold_66571                         6117  0 +     18357 C
e Myotis_lucifugus.GL429869.1                               387330  0 +   4330536 C
e Myotis_davidii.KB100139.1                                4391291  0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9797117  0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_5560               2854  0 -    124358 C
e Mus_spretus.CM004101.1                                  39500157 15 + 130317789 I
e Mus_pahari.LT608297.1                                   58219200 15 +  89631738 I
e Mus_musculus.chr8                                       41691238 15 + 129401213 I
e Mus_caroli.LT608237.1                                   35597698 15 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          45111  0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   21752 17 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  31880  0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 182719  0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   362676  0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             45866  1 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6368135  1 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15966504 15 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                188304  1 +    200668 I
e Mesoplodon_bidens.MesBid_scaffold_6114                     90568  0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53122  0 -    140813 C
e Megaderma_lyra.MegLyr_scaffold_4542                       153711  0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7504520  0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             223883  0 +    317179 C
e Manis_javanica.JSZB01003497.1                             676586  0 -    737560 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                226287 19 -    270270 I
e Loxodonta_africana.GL010049.1                           39087697 84 +  43346337 I
e Lipotes_vexillifer.KE559953.1                             344284  0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_61236                     1180  0 -     25587 C
e Kogia_breviceps.KogBre_flattened_line_3970                 74943  0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1242424 337 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447               13102  0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     390291  0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      11050  0 -    135385 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  73655  0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_363447                455  0 +       852 C
e Hipposideros_armiger.JXIK01000431.1                      1556086  0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803               11036  0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_116546                5963 82 +      8654 I
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 15649  0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                34003 17 -    327341 I
e Graphiurus_murinus.GraMur_scaffold_10447                    6729  0 -     78134 C
e Glis_glis.GliGli_scaffold_163929                            4830  0 -      6791 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                       1982  0 +    660261 C
e Galeopterus_variegatus.GalVar_scaffold_51812                4795  0 -     28519 C
e Felis_nigripes.FelNig_flattened_line_44075                   816 18 +     25330 I
e Felis_catus_fca126.CM031415.1                          185120174 18 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114              1923  0 +     25849 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           74208  0 -    133382 C
e Equus_przewalskii.KK951119.1                              414913  0 -    498745 C
e Equus_caballus.CM000403.2                               21378931  0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3045001  0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12582503  0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           17018 14 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          35089 14 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       245723  0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               9353 19 +     19438 I
e Diceros_bicornis.DicBicMic_scaffold_5955                  142335  0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  667533  0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18634998  0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    649894  0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              7595 23 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118889 15 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 47377 15 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          6014  0 -      8242 C
e Condylura_cristata.JH655891.1                           35810460  0 +  53390261 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22095  0 +     27315 C
e Cephalopachus_bancanus.k141_1140705                         1800  0 -     76265 C
e Catagonus_wagneri.CatWag_scaffold_2839                     82932  0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    31435  0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           274137  0 +    496798 C
e Capra_hircus.CM004588.1                                 26597935  0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27415938  0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1212000  0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4668312  0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7634011  0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1536089  0 -   4408762 C
e Bos_taurus.CM000203.6                                   27559408  0 -  45695690 C
e Bos_mutus.JH880303.1                                      768863  0 +   1948126 C
e Bos_indicus.CM003047.1                                  28423262  0 -  48749331 C
e Bison_bison.KN261452.1                                     36122  0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     92923  0 +    124022 C
e Balaenoptera_bonaerensis.DF411050.1                         3095  0 -     25979 C
e Balaenoptera_acutorostrata.KI537508.1                    7966594  0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      27181  0 -     32367 C
e Antilocapra_americana.AntAmePen_scaffold_21030             53092  0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      180344  0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1591934  0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    20875 333 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28723  2 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           816234  0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       9733  5 +     36723 T------T----T----------T--------C
s Acinonyx_jubatus.LLWD01001279.1                           816234  5 +   1699592 g------t----g----------t--------c
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418739  5 +  29979442 g------t----g----------t--------c
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            218740  4 +    347723 c------t----g----------t---------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50679  5 +     53615 t------t----t----------t--------c
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2706  5 +     13857 t------t----t----------t--------c
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19261  5 -     21945 t------t----t----------t--------c
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20946  5 +     32033 t------t----t----------t--------c
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74206  9 -     84148 t------t----t----------tttt----cc
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46444 13 -     78289 t--ttttt----t----------tttt----cc
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45874  9 +     55831 t------t----t----------tttt----cc
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44336  9 -     64179 t------t----t----------tttt----cc
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1443  9 -      3959 t------t----t----------tttt----cc
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42961  9 +     45454 t------t----t----------tttt----cc
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48608 10 +     70886 t------tt---t----------tttt----cc
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10780  9 +     30854 t------t----t----------tttt----cc
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34916  9 +     42133 t------t----t----------tttt----cc
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1591934  5 +   2318259 g------t----a----------t--------c
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180344  5 -    412891 g------t----g----------t--------c
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53092  5 -     68529 c------t----a----------t--------c
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3157  9 +     17741 t------t----t----------tttt----cc
i Aotus_azarae.k141_887050                               I 9 C 0
s Aotus_griseimembra.k141_3192254                             3782  9 -     15923 t------t----t----------tttt----cc
i Aotus_griseimembra.k141_3192254                        I 9 C 0
s Aotus_nancymaae.KZ198451.1                                674064  9 +   5030052 t------t----t----------tttt----cc
i Aotus_nancymaae.KZ198451.1                             I 9 C 0
s Aotus_trivirgatus.k141_318729                               4058  9 -     16391 t------t----t----------tttt----cc
i Aotus_trivirgatus.k141_318729                          I 9 C 0
s Aotus_vociferans.k141_1514463                               3617  9 -     17186 t------t----t----------tttt----cc
i Aotus_vociferans.k141_1514463                          I 9 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27181  5 -     32367 a------a----t----------g--------t
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  8858  5 -     15198 g------t----g----------t--------c
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276676  9 +  21539123 t------t----t----------tttt----cc
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12842  9 +     48076 t------t----t----------tttt----cc
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7977 12 -     28759 t------ttt--t----------ttttt---cc
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35533  9 +     44353 t------t----t----------tttt----cc
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50902 11 -     71267 t------ttt--t----------tttt----cc
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24960  9 -     33135 t------t----t----------tttt----cc
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966594  5 -  23207421 g------t----g----------t--------c
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3095  5 -     25979 g------t----g----------t--------c
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     92923  5 +    124022 g------t----a----------t--------c
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36122  5 +    288883 g------t----a----------t--------c
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423262  5 -  48749331 g------t----a----------t--------c
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      768863  5 +   1948126 g------t----a----------t--------c
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559408  5 -  45695690 g------t----a----------t--------c
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536089  5 -   4408762 t------t----a----------t--------c
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9763 13 +     28062 t------tttt-t----------tctttt---c
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45059  8 -     91139 ------------t----------tctttt---c
i Cacajao_calvus.k141_89051                              I 4 C 0
s Cacajao_hosomi.k141_81245                                  22581 13 +     95584 t------tttt-t----------tctttt---c
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22494 13 +    119600 t------tttt-t----------tctttt---c
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12144 10 +     18648 -------t----t----------tttttt--cc
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11650 12 -     13885 t------t----t----------ttttttt-cc
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3749 12 -      8861 t------t----t----------tttttt-ccc
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456144  9 + 189096842 -----------------------T-TTTTTTCC
i Callithrix_jacchus.pat_scaffold_3                      I 2 C 0
s Callithrix_kuhlii.k119_102356                               3663 12 +      8664 t------t----t----------tttttt-ccc
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7634011  5 +  17673402 g------t----g----------t--------c
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4668312  5 +   7040546 g------t----g----------t--------c
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1212000  5 +   1652518 g------t----g----------t--------c
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42508683  5 +  60362399 g------t----g----------t--------c
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12318  5 -     23171 g------t----g----------t--------c
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225659  5 +   9314153 g------t----g----------t--------c
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41618796  5 +  59632846 g------t----g----------t--------c
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110377  5 -  63665305 g------t----g----------t--------c
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27415938  5 -  46296322 g------t----a----------t--------c
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26597935  5 +  44709034 g------t----a----------t--------c
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    1868  5 -     20114 c------c----a----------t--------c
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274137  5 +    496798 T------T----G----------T--------A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               3732  5 +      9923 g------t----g----------t--------c
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31435  5 -     39886 t------t----g----------c--------t
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     82932  5 -    217609 g------t----g----------t--------g
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4999839  5 +  23392119 c------t----g----------t--------c
i Cavia_aperea.AVPZ01000300.1                            I 21 C 0
s Cavia_porcellus.DS562891.1                               5003280  5 +  23407841 c------t----g----------t--------c
i Cavia_porcellus.DS562891.1                             I 21 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       66357  5 -     66877 c------t----g----------t--------c
i Cavia_tschudii.CavTsc_scaffold_23560                   I 21 C 0
s Cebuella_niveiventris.k141_592277                           7062 12 -     12580 -------t----t----------ttttttttcc
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45120 10 +     53515 -------t----t----------tttttt--cc
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  375854  9 -  26074798 t------t----t----------tttt----cc
i Cebus_albifrons.Contig27                               I 2817 C 0
s Cebus_olivaceus.k141_1404781                                9925  9 -     34880 t------t----t----------tttt----cc
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69021  9 -     89041 t------t----t----------tttt----cc
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         1800  5 -     76265 t------t----g----------t--------a
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495262  5 -  27778364 g------t----g----------t--------c
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22095  5 +     27315 g------t----g----------t--------c
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143762  5 -   4669795 t------t----t----------t--------c
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47501  5 +     47900 t------t----t----------t--------c
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2934  5 -     14410 t------t----t----------t--------c
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47316  5 -    148725 t------t----t----------t--------c
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29594  5 -     40656 t------t----t----------t--------c
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9553  5 +     20796 t------t----t----------t--------c
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14666  5 -     17524 t------t----t----------t--------c
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30399  5 -     34525 t------t----t----------t--------c
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14177  5 -     25376 t------t----t----------t--------c
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366766  5 -  39242232 t------t----t----------t--------c
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272491  5 +  21565898 t------t----t----------t--------c
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34858  5 -     45857 t------t----t----------t--------c
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29759  5 -     32606 t------t----t----------t--------c
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5920  5 +      8499 t------t----t----------t--------c
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28319  5 +     70610 t------t----t----------t--------c
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25281  5 +     36323 t------t----t----------t--------c
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10853  9 -     32913 t------t----t----------tttt----cc
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21266  9 -     40346 t------t----t----------tttt----cc
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21521  8 +    216457 -------t----t----------tttt----cc
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21310  9 +     39636 t------t----t----------tttt----cc
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33293 12 -     52013 t------tttt-t----------tttt----cc
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44395 13 -    112038 t------tttttt----------ttttt----c
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9946 12 +     34062 t------tttt-t----------ttttt----c
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346181  5 +  18827391 t------t----t----------t--------c
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12720  5 -     44032 t------t----t----------t--------c
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307567  5 - 135778131 t------t----t----------t--------c
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411975  5 -   2368649 t------t----t----------t--------c
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381857  5 - 200372422 t------t----t----------t--------c
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5409  5 -     84244 t------t----t----------t--------c
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810460  3 +  53390261 ------------c----------t--------a
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6014  5 -      8242 g------t----g----------t--------c
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47392  5 -     83289 g------g----g----------t--------c
i Cricetomys_gambianus.CriGam_scaffold_14425             I 15 I 2
s Cricetulus_griseus.LT883664.1                          213118904  5 - 224834208 g------g----c----------t--------c
i Cricetulus_griseus.LT883664.1                          I 15 I 2
s Crocidura_indochinensis.CroInd_scaffold_77846              12275  3 +     12657 ------------g----------t--------c
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7618  5 +     87169 g------t----g----------t--------c
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 23 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    649894  5 -   1526836 c------t----g----------t--------c
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22538  5 +     50838 c------t----g----------t--------c
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12026  5 +     36344 c------t----g----------t--------c
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31467  5 +     75252 c------t----g----------t--------c
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18634998  5 -  35494412 g------t----g----------t--------c
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11868724  5 -  20541912 g------t----g----------t--------c
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667533  5 -   1390856 g------t----g----------t--------c
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142335  5 -    198055 g------t----g----------t--------c
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955083  5 -  37912305 t------g----t----------t--------t
i Dipodomys_ordii.KN672350.1                             I 4 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                   9997  5 -     10735 T------G----T----------T--------T
i Dipodomys_stephensi.DipSte_scaffold_89095              I 4 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 12598  5 +     14636 c------t----g----------t--------c
i Dolichotis_patagonum.DolPat_scaffold_80628             I 22 C 0
s Eidolon_helvum.AWHC01266696.1                               9372  5 +     19438 g------t----g----------t--------c
i Eidolon_helvum.AWHC01266696.1                          I 19 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       245723  5 -    607251 g------t----a----------t--------c
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35103  5 +    110024 g------t----t----------t--------c
i Ellobius_lutescens.LOEQ01008920.1                      I 14 I 2
s Ellobius_talpinus.LOJH01026522.1                           17032  5 +     18970 G------T----C----------T--------C
i Ellobius_talpinus.LOJH01026522.1                       I 14 I 2
s Enhydra_lutris.KZ291758.1                               24925232  5 +  41312741 g------t----g----------t--------c
i Enhydra_lutris.KZ291758.1                              I 10 C 0
s Eptesicus_fuscus.JH977646.1                             12582503  5 +  14770903 a------t----g----------t--------c
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045001  5 -   4378816 g------t----g----------t--------c
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21378931  5 +  39960074 g------t----g----------t--------c
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              414913  5 -    498745 g------t----g----------t--------c
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671228  3 +   7059049 ------------g----------t--------t
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265709  5 +  21539334 t------t----t----------t--------c
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74208  5 -    133382 g------t----g----------t--------c
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              1923  5 +     25849 g------t----g----------t--------c
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250236  5 - 206538554 g------t----g----------t--------c
i Felis_catus.CM001381.2                                 I 18 C 0
s Felis_catus_fca126.CM031415.1                          185120192  5 - 205367284 g------t----g----------t--------c
i Felis_catus_fca126.CM031415.1                          I 18 C 0
s Felis_nigripes.FelNig_flattened_line_44075                   834  5 +     25330 g------t----g----------t--------c
i Felis_nigripes.FelNig_flattened_line_44075             I 18 C 0
s Fukomys_damarensis.KN121974.1                            2925832  5 -   3816255 c------t----g----------t--------c
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                4795  5 -     28519 t------t----g----------t--------c
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       1982  5 +    660261 g------t----a----------t--------c
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Gorilla_beringei.k141_3218903                                484  5 -      2763 t------t----t----------t--------c
i Gorilla_beringei.k141_3218903                          I 132 C 0
s Gorilla_gorilla.LT578341.1                                258904  5 - 186649187 t------t----t----------t--------c
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    6729 14 -     78134 t------t----tttttttttaat---------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34020  5 -    327341 g------t----g----------t--------c
i Helogale_parvula.HelPar_flattened_line_2585            I 17 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15649  5 +     48891 g------t----a----------t--------c
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938273  5 -  22651954 c------t----a----------t--------c
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11036  5 -     36432 g------t----g----------t--------c
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556086  5 -   1711038 g------t----g----------t--------c
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_363447                455  5 +       852 g------t----g----------t--------c
i Hipposideros_galeritus.HipGal_scaffold_363447          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145373  5 -    630532 t------t----t----------t--------c
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73655  5 +     83186 g------t----g----------t--------c
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75214  5 +    143317 c------t----g----------t--------c
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 22 C 0
s Hylobates_agilis.k141_1155965                               8419  5 +     12352 t------t----t----------t--------c
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15606  5 +     55766 t------t----t----------t--------c
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055134  5 + 191637585 t------t----t----------t--------c
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804012  5 +  11177569 t------t----t----------t--------c
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11050  5 -    135385 c------t----a----------t--------a
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390291  5 +   7955117 a------a----t----------c--------t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13102  5 -     16823 g------t----g----------t--------c
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 74943  5 -     97402 g------t----g----------t--------c
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45226  9 +    110728 t------t----t----------ttt----ccc
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1180  5 -     25587 g------t----g----------t--------c
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                         697 13 -     23187 t------g----t----------ttttttttcc
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1010 13 -     14280 t------g----t----------ttttttttcc
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         653 12 +      3713 t------t----t----------ttttttt-cc
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      844 11 +      8855 t------t----t----------tttttt--cc
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5646 11 -     13645 t------t----t----------tttttt--cc
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816539  5 -   3914936 g------t----g----------t--------c
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     21737  4 +     24238 t------t----t----------t---------
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 3
s Lipotes_vexillifer.KE559953.1                             344284  5 +    662738 g------t----g----------t--------c
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336644  5 -   1826925 t------t----t----------t--------c
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                41617951  5 +  59628241 g------t----g----------t--------c
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48036  5 -     61512 t------t----t----------t--------c
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375698  5 -  60120075 t------t----t----------t--------c
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27966  5 +     30207 t------t----t----------t--------c
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2804  5 -      5035 t------t----t----------t--------c
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27919  5 +     30527 t------t----t----------t--------c
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39095  5 -     50087 t------t----t----------t--------c
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48840  5 +     51645 t------t----t----------t--------c
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418042  5 - 187317192 t------t----t----------t--------c
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402273  5 +  25927173 t------t----t----------t--------c
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51444  5 -     62418 t------t----t----------t--------c
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3975  5 +     14901 t------t----t----------t--------c
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47917  5 +     59329 t------t----t----------t--------c
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273824  5 +    668171 t------t----t----------t--------c
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2456  5 -      5049 t------t----t----------t--------c
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5622  5 +     17132 t------t----t----------t--------c
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226306  5 -    270270 g------t----g----------t--------c
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 19 C 0
s Mandrillus_leucophaeus.scaffold280                        325112  5 +  24302211 t------t----t----------t--------c
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359943  5 -    752769 t------t----t----------t--------c
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676586  5 -    737560 g------t----g----------t--------c
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             223883  5 +    317179 g------t----g----------t--------c
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504520  5 +  40650429 a------a----t----------c--------t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       153711  5 +    207569 g------t----g----------t--------c
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29284  5 -     74585 g------t----g----------t--------c
i Mellivora_capensis.MelCap_flattened_line_19308         I 10 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90568  5 +     93471 g------t----g----------t--------c
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12243 11 +     17804 -------t----t----------ttttttt-cc
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12743 11 -     12984 -------t----t----------ttttttt-cc
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21062 11 -     26561 -------t----t----------ttttttt-cc
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188305  4 +    200668 -------t----g----------t--------c
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 1 C 0
s Microtus_ochrogaster.CM001695.1                         15966519  4 +  27267610 -------T----C----------T--------C
i Microtus_ochrogaster.CM001695.1                        I 15 I 2
s Miniopterus_natalensis.LDJU01000034.1                    6368136  3 -   8254450 ------------g----------t--------c
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             45867  3 -     48117 ------------g----------t--------c
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         25206  5 -     27822 t------t----t----------t--------c
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11772  5 +     27589 g------t----g----------t--------c
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362676  5 +    437263 g------t----g----------t--------c
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182719  5 +    366855 g------t----g----------t--------c
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  31880  5 -     82753 g------t----a----------t--------c
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21769  5 -     63510 g------t----g----------t--------c
i Mungos_mungo.MunMun_flattened_line_18455               I 17 C 0
s Murina_feae.MurFea_scaffold_17764                          45111  5 +     47283 g------t----g----------t--------c
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35597713  5 + 120012414 a------g----c----------t--------c
i Mus_caroli.LT608237.1                                  I 15 I 2
s Mus_musculus.chr8                                       41691253  5 + 129401213 a------g----c----------t--------c
i Mus_musculus.chr8                                      I 15 I 2
s Mus_pahari.LT608297.1                                   58219215  5 +  89631738 a------g----c----------t--------c
i Mus_pahari.LT608297.1                                  I 15 I 2
s Mus_spretus.CM004101.1                                  39500172  5 + 130317789 a------a----c----------t--------c
i Mus_spretus.CM004101.1                                 I 15 I 2
s Muscardinus_avellanarius.MusAve_scaffold_5560               2854  4 -    124358 t------t----g----------t---------
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358159  5 +  14710649 g------t----g----------t--------c
i Mustela_putorius.JH418006.1                            I 10 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                       933  5 -     27262 c------t----g----------t--------c
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797117  5 +  10118263 g------t----g----------t--------c
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391291  5 +   6019432 g------t----g----------t--------c
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387330  5 +   4330536 g------t----g----------t--------c
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6117  5 +     18357 g------t----g----------t--------c
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950128  5 +   3037898 g------g----c----------t--------c
i Nannospalax_galili.KL204047.1                          C 0 I 2
s Nasalis_larvatus.k141_1350636                              31990  5 +     34575 t------t----t----------t--------c
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469219  5 -  31847680 g------t----g----------t--------c
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235342  5 -   7148211 g------t----g----------t--------c
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131047  5 -    149072 g------c----g----------t--------c
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56307  5 -    132029 t------t----t----------t--------c
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12402  5 -     16345 t------t----t----------t--------c
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18291  5 +     22201 t------t----t----------t--------c
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416521  5 -  22158432 t------t----t----------t--------c
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28696  5 -     54323 t------t----t----------t--------c
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201655  5 +   9404916 g------t----g----------t--------c
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059197  5 -  11899542 c------t----g----------t--------c
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1454988  5 +   2017862 g------t----g----------t--------c
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442278  5 -    630418 g------t----a----------t--------c
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          21933  5 +    150152 g------t----a----------t--------c
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97133  5 -    140218 g------t----c----------t--------c
i Ondatra_zibethicus.OndZib_scaffold_7387                I 13 I 2
s Onychomys_torridus.OnyTor_scaffold_28377                    7675  5 -     41509 g------a----c----------t--------c
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 2
s Orcinus_orca.KB316932.1                                  8105747  5 +  10937097 g------t----g----------t--------c
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108398  4 - 174332312 t------t----t----------t---------
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 3
s Otocyon_megalotis.JAEUCK010005147.1                        42606  5 +    559221 g------t----g----------t--------c
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26410675  5 -  44047080 g------t----a----------t--------c
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11298  5 +     17875 g------t----a----------t--------c
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  263  5 +      1186 t------t----t----------t--------c
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1476883  5 - 189151597 t------t----t----------t--------c
i Pan_troglodytes.CM009242.2                             C 0 I 30
s Panthera_onca.PanOnc_flattened_line_3271                   28238  5 -    230217 g------t----g----------t--------c
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465470  5 -  18783137 g------t----g----------t--------c
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976071  5 +   8748460 g------t----g----------t--------c
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622193  5 +   2937107 g------t----a----------t--------c
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246121  5 - 183742232 T------T----T----------T--------C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12406  5 +     21308 t------t----t----------t--------c
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295149  5 -  20919399 t------t----t----------t--------c
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25046  5 -     27687 t------t----t----------t--------c
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1725  5 +     10553 t------t----t----------t--------c
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1685  5 -     10386 t------t----t----------t--------c
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18408  5 +     78924 g------t----g----------t--------c
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 17 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7285 11 +      9367 TTTTCATT----T----------T--------T
i Perognathus_longimembris.PerPac_flattened_line_89005   I 4 C 0
s Peromyscus_maniculatus.KI615324.1                         250894  5 +  18517816 G------G----C----------T--------C
i Peromyscus_maniculatus.KI615324.1                      C 0 I 2
s Petromus_typicus.PetTyp_scaffold_17301                     35289  5 -     56120 c------t----a----------t--------c
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7268  5 -     63832 g------t----g----------t--------c
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5368  5 +     55023 t------t----t----------t--------c
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4890  5 -     89929 t------t----t----------t--------c
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5480  5 +     40849 t------t----t----------t--------c
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257210  5 +  14605196 t------t----t----------t--------c
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7611  5 +     22231 g------t----g----------t--------c
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66746  9 +    207309 t------t----t----------tttt----cc
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7839 10 -     25401 t------t----t----------ttttt---cc
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33587  9 +     58159 t------t----t----------tttt----cc
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33863  9 +     63561 t------t----t----------tttt----ct
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33618  9 +     51148 t------t----t----------tttt----cc
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558593  9 -   4542175 t------t----t----------tttt----cc
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33602  9 +     51125 t------t----t----------tttt----cc
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4289  5 +     19503 g------t----g----------t--------c
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10028  7 +     39866 ------------t----------tttt----cc
i Plecturocebus_bernhardi.k141_2549090                   I 1 C 0
s Plecturocebus_brunneus.k141_862875                          5110  7 -      9282 ------------t----------tttt----cc
i Plecturocebus_brunneus.k141_862875                     I 1 C 0
s Plecturocebus_caligatus.k141_1382851                       44520  1 -     87950 --------------------------------c
i Plecturocebus_caligatus.k141_1382851                   I 7 C 0
s Plecturocebus_cinerascens.k141_1164729                     44908  7 -     88961 ------------t----------tttt----cc
i Plecturocebus_cinerascens.k141_1164729                 I 1 C 0
s Plecturocebus_cupreus.k141_2351393                          9606  7 -     39403 ------------t----------tttt----cc
i Plecturocebus_cupreus.k141_2351393                     I 1 C 0
s Plecturocebus_dubius.k141_1058799                          44557  8 +     87928 ------------t----------ttttt---cc
i Plecturocebus_dubius.k141_1058799                      I 1 C 0
s Plecturocebus_grovesi.k141_2013005                          9605  7 -     60166 ------------t----------tttt----cc
i Plecturocebus_grovesi.k141_2013005                     I 1 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16526  7 -     67232 ------------t----------tttt----cc
i Plecturocebus_hoffmannsi.k141_3303950                  I 1 C 0
s Plecturocebus_miltoni.k141_349282                          44458  7 -     90634 ------------t----------tttt----cc
i Plecturocebus_miltoni.k141_349282                      I 1 C 0
s Plecturocebus_moloch.k141_1031110                          45925  7 +     89403 ------------t----------tttt----cc
i Plecturocebus_moloch.k141_1031110                      I 1 C 0
s Pongo_abelii.CM009266.2                                   182068  5 - 189387572 t------t----t----------t--------c
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196811  5 -   9816681 t------t----t----------t--------c
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30570  5 +     69807 t------t----t----------t--------c
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47751  5 -     80239 t------t----t----------t--------c
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55387  5 -     66298 g------t----g----------t--------c
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7769  5 -     18639 g------t----g----------t--------c
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 10 C 0
s Pteropus_alecto.KB030862.1                               5843924  5 -  28871421 g------t----g----------t--------c
i Pteropus_alecto.KB030862.1                             I 19 C 0
s Pteropus_vampyrus.KN525825.1                             3540440  5 -   4952924 g------a----g----------t--------c
i Pteropus_vampyrus.KN525825.1                           I 19 C 0
s Puma_concolor.QAVW01001104.1                            18102460  5 +  38429054 g------t----g----------t--------c
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29937  5 +     91421 t------t----t----------t--------c
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156489  5 -   7812017 t------t----t----------t--------c
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10789  5 +     72585 t------t----t----------t--------c
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4796  5 -     55207 g------t----a----------t--------c
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37025832  5 -  90668790 t------c----c----------t--------c
i Rattus_norvegicus.chr16                                C 0 I 2
s Rhinolophus_sinicus.LVEH01000134.1                       2917852  5 +   3329780 g------t----g----------t--------c
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4395  5 +      7119 t------t----t----------t--------c
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125065  5 + 195417433 t------t----t----------t--------c
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239237  5 -   7961872 t------t----t----------t--------c
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78418  5 -    116970 g------g----g----------t--------c
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 19 C 0
s Saguinus_bicolor.k141_161125                                9188 14 +     12412 t------tt---tt---------ttttttt-cc
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               647 12 +      9876 t------t----tt---------tttttt--cc
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16252 11 -     24931 T------T----C----------T--TTTTTCC
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1132 11 +      4564 t------t----c----------tttttt--cc
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3937 11 -      7443 t------t----c----------tttttt--cc
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394842 13 - 209938924 t------tt---tt---------tttttt--cc
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1552 11 +     10149 t------t----c----------tttttt--cc
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                890 10 +     10417 t------t----tt---------tttt----cc
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14245  5 +     16473 g------t----a----------t--------g
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111022  7 + 121099817 ------------t----------tttt----cc
i Saimiri_boliviensis.NW_024100920.1                     I 1 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32588 11 -     47369 t------t----t----------tttttt--cc
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32974  9 -     79414 T------T----T----------T----TTTCC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29665  9 -     34454 T------T----T----------T----TTTCC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17066 10 -     22428 T------T----T----------T---TTTTCC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32220  9 -     47109 t------t----t----------tttt----cc
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240245  9 +   5703754 t------t----t----------tttt----cc
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9836  9 +     21866 t------t----t----------tttt----cc
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122259  3 +    313613 ------------g----------t--------c
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1376  5 +     11297 t------t----t----------t--------c
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31769  5 +     58920 t------t----t----------t--------c
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18267  5 -     45317 t------t----t----------t--------c
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25925  5 -     42441 t------t----t----------t--------c
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28601  5 -     29113 t------t----t----------t--------c
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31678  5 -     48123 t------t----t----------t--------c
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52679  5 +     77746 g------g----c----------t--------c
i Sigmodon_hispidus.SigHis_scaffold_20193                I 15 I 2
s Solenodon_paradoxus.SolPar_flattened_line_126            1867045  3 -   1910179 ------------g----------t--------c
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674300  3 +  18376816 ------------g----------t--------c
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1871861  5 +   3870691 a------a----t----------c--------t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             15992  5 -     97271 g------t----g----------t--------c
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128618  5 +    196729 g------t----g----------t--------c
i Suricata_suricatta.SurSur_flattened_line_6629          I 17 C 0
s Sus_scrofa.CM000828.4                                    6647878  5 +  69701581 a------t----g----------t--------a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393778  5 +   1523678 t------t----t----------t--------c
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17340  5 +     22964 g------t----g----------t--------c
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194719  5 +    199430 g------t----g----------t--------c
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108699  5 -    539355 g------t----g----------t--------c
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4328  5 +      9917 t------t----g----------t--------a
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11124  5 +     20590 t------t----g----------t--------a
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355930  5 - 186847797 t------t----t----------t--------c
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27567  5 -     33621 c------t----g----------t--------c
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483642  5 -    610378 g------t----g----------t--------c
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_1189070                        23677  5 +     26378 t------t----t----------t--------c
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36476  5 -     78344 t------t----t----------t--------c
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23002  5 +     25722 t------t----t----------t--------c
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31432  5 -     62838 t------t----t----------t--------c
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31423  5 +     46913 t------t----t----------t--------c
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12160  5 -     28527 t------t----t----------t--------c
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33363  5 -     64340 t------t----t----------t--------c
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31401  5 -     63452 t------t----t----------t--------c
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12852  5 +     22490 t------t----t----------t--------c
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          818  5 +      9911 t------t----t----------t--------c
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          613  5 -     33539 t------t----t----------t--------c
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258372  5 -   6242583 t------t----t----------t--------c
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4391  5 +     19340 t------t----t----------t--------c
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177506  5 -    200418 a------t----g----------t--------c
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839276  5 -   4065304 t------t----a----------t--------c
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13370  5 -     70247 t------t----a----------t--------c
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17368871  5 -  33153633 g------t----g----------t--------c
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7106  3 -     21056 ------------g----------t--------c
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185195  5 +   5085361 g------t----g----------t--------c
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   79403  5 +   5488506 g------t----g----------t--------c
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108549  5 -    112863 g------t----g----------t--------c
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        177742  5 -    224448 a------a----t----------c--------t
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32195  5 -     86975 g------t----g----------t--------c
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       3966  5 -     63895 G------T----C----------T--------C
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 9 I 111
s Ziphius_cavirostris.ZipCav_flattened_line_334639             832  5 +      3447 g------t----g----------t--------c
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_510450               1901 278 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    49396 73 +    145209 I
e Echinops_telfairi.JH980293.1                            62858214 80 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               2589 223 +     11607 I
e Elephantulus_edwardii.JH947257.1                         9113279 68 -  10337057 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            609346 87 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                 1866 90 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   22296 79 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2112554 81 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            15196 81 -     19938 I
e Trichechus_manatus.JH594705.1                            6485301 82 -  10818551 I
e Psammomys_obesus.NESX01036366.1                            40656  0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_128773                 2495 82 -     12774 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53122  0 -    140813 C
e Loxodonta_africana.GL010049.1                           39087697 84 +  43346337 I
e Jaculus_jaculus.JH725527.1                               1242424 337 +   9596543 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                5963 82 +      8654 I
e Glis_glis.GliGli_scaffold_163929                            4830  0 -      6791 C
e Allactaga_bullata.AllBul_scaffold_20030                    20875 333 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28723  2 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9738 5 +     36723 AA-TTT
s Acinonyx_jubatus.LLWD01001279.1                           816239 5 +   1699592 ag-ttt
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418744 5 +  29979442 ag-ttt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            218744 5 +    347723 ag-ttt
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50684 5 +     53615 aa-ttt
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2711 5 +     13857 aa-ttt
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19266 5 -     21945 aa-ttt
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20951 5 +     32033 aa-ttt
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74215 5 -     84148 aa-ttt
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46457 5 -     78289 aa-ttt
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45883 5 +     55831 aa-ttt
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44345 5 -     64179 aa-ttt
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1452 5 -      3959 aa-ttt
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42970 5 +     45454 aa-ttt
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48618 5 +     70886 aa-ttt
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10789 5 +     30854 aa-ttt
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34925 5 +     42133 aa-ttt
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1591939 5 +   2318259 aa-ttt
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180349 5 -    412891 ag-ttt
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53097 5 -     68529 aa-ttt
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3166 5 +     17741 aa-ttt
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3791 5 -     15923 aa-ttt
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674073 5 +   5030052 aa-ttt
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4067 5 -     16391 aa-ttt
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3626 5 -     17186 aa-ttt
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27186 5 -     32367 tg-tta
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  8863 5 -     15198 ag-ttt
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276685 5 +  21539123 aa-ttt
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12851 5 +     48076 aa-ttt
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7989 5 -     28759 aa-ttt
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35542 5 +     44353 aa-ttt
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50913 5 -     71267 aa-ttt
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24969 5 -     33135 aa-ttt
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966599 5 -  23207421 ag-ttt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3100 5 -     25979 ag-ttt
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     92928 5 +    124022 aa-ttt
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36127 5 +    288883 aa-ttt
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423267 5 -  48749331 aa-ttt
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      768868 5 +   1948126 aa-ttt
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559413 5 -  45695690 aa-ttt
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536094 5 -   4408762 aa-ttt
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9776 5 +     28062 aa-ttt
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45067 5 -     91139 aa-ttt
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22594 5 +     95584 aa-ttt
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22507 5 +    119600 aa-ttt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12154 5 +     18648 aa-ttt
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11662 5 -     13885 aa-ttt
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3761 5 -      8861 aa-ttt
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456153 5 + 189096842 AA-TTT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3675 5 +      8664 aa-ttt
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7634016 5 +  17673402 ag-ttt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4668317 5 +   7040546 ag-ttt
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1212005 5 +   1652518 ag-ttt
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42508688 5 +  60362399 ag-ttt
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12323 5 -     23171 ag-ttt
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225664 5 +   9314153 ag-ttt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41618801 5 +  59632846 ag-ttt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110382 5 -  63665305 ag-ttt
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27415943 5 -  46296322 aa-ttt
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26597940 5 +  44709034 aa-ttt
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    1873 3 -     20114 ag-t--
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274142 5 +    496798 AG-TTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               3737 5 +      9923 ag-ttt
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31440 5 -     39886 tg-ttt
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 9
s Catagonus_wagneri.CatWag_scaffold_2839                     82937 5 -    217609 ag-ttt
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4999844 5 +  23392119 aN-NNN
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5003285 5 +  23407841 ag-ttt
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       66362 5 -     66877 ag-ttt
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 C 0
s Cebuella_niveiventris.k141_592277                           7074 5 -     12580 aa-ttt
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45130 5 +     53515 aa-ttt
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  375863 5 -  26074798 aa-ttt
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9934 5 -     34880 aa-ttt
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69030 5 -     89041 aa-ttt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         1805 5 -     76265 ag-ttt
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495267 5 -  27778364 ag-ttt
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22100 5 +     27315 ag-ttt
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143767 5 -   4669795 ag-ttt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47506 5 +     47900 ag-ttt
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2939 5 -     14410 ag-ttt
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47321 5 -    148725 ag-ttt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29599 5 -     40656 aa-ttt
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9558 5 +     20796 aa-ttt
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14671 5 -     17524 aa-ttt
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30404 5 -     34525 aa-ttt
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14182 5 -     25376 aa-ttt
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366771 5 -  39242232 aa-ttt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272496 5 +  21565898 aa-ttt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34863 5 -     45857 aa-ttt
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29764 5 -     32606 aa-ttt
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5925 5 +      8499 aa-ttt
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28324 5 +     70610 aa-ttt
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25286 5 +     36323 aa-ttt
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10862 5 -     32913 aa-tat
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21275 5 -     40346 aa-tat
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21529 5 +    216457 aa-tat
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21319 5 +     39636 aa-tat
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33305 5 -     52013 aa-ttt
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44408 5 -    112038 aa-ttt
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9958 5 +     34062 aa-ttt
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346186 5 +  18827391 aa-ttt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12725 5 -     44032 aa-ttt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307572 5 - 135778131 aa-ttt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411980 5 -   2368649 ag-ttt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381862 5 - 200372422 ag-ttt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5414 5 -     84244 ag-ttt
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810463 5 +  53390261 ag-ttt
i Condylura_cristata.JH655891.1                          C 0 I 8
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6019 5 -      8242 ca-ttt
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47399 5 -     83289 ag-ttt
i Cricetomys_gambianus.CriGam_scaffold_14425             I 2 I 15
s Cricetulus_griseus.LT883664.1                          213118911 5 - 224834208 ag-ttt
i Cricetulus_griseus.LT883664.1                          I 2 I 16
s Crocidura_indochinensis.CroInd_scaffold_77846              12278 5 +     12657 aa-ttt
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7623 5 +     87169 ag-ttt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    649899 5 -   1526836 ag-ttt
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22543 5 +     50838 ag-ttt
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12031 5 +     36344 ag-ttt
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31472 5 +     75252 aa-ttt
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635003 5 -  35494412 ag-ttt
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11868729 5 -  20541912 ag-ttt
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667538 5 -   1390856 ag-ttt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142340 5 -    198055 ag-ttt
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955088 5 -  37912305 tg-ttt
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_89095                  10002 5 -     10735 TG-TTT
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 12603 5 +     14636 ag-ttt
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9377 5 +     19438 ag-ttt
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       245728 5 -    607251 aa-ttt
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35110 5 +    110024 ag-tTT
i Ellobius_lutescens.LOEQ01008920.1                      I 2 I 16
s Ellobius_talpinus.LOJH01026522.1                           17039 5 +     18970 AG-TTT
i Ellobius_talpinus.LOJH01026522.1                       I 2 I 16
s Enhydra_lutris.KZ291758.1                               24925237 5 +  41312741 ag-ttt
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582508 5 +  14770903 ag-gtt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045006 5 -   4378816 ag-ttt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21378936 5 +  39960074 ag-ttt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              414918 5 -    498745 ag-ttt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671231 5 +   7059049 ga-ttt
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265714 5 +  21539334 aa-ttt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74213 5 -    133382 ag-ttt
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              1928 5 +     25849 ag-ttt
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250241 5 - 206538554 ag-ttt
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120197 5 - 205367284 ag-ttt
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                   839 5 +     25330 ag-ttt
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2925837 5 -   3816255 ag-ttt
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                4800 5 -     28519 ag-ttt
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       1987 5 +    660261 aa-ctt
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            4830 1 -      6791 -----t
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                489 5 -      2763 aa-ttt
i Gorilla_beringei.k141_3218903                          C 0 I 25
s Gorilla_gorilla.LT578341.1                                258909 5 - 186649187 aa-ttt
i Gorilla_gorilla.LT578341.1                             C 0 I 25
s Graphiurus_murinus.GraMur_scaffold_10447                    6743 3 -     78134 ---ttt
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34025 5 -    327341 ag-ttt
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15654 5 +     48891 aa-ttt
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938278 5 -  22651954 ag-ttt
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11041 5 -     36432 ag-ttt
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556091 5 -   1711038 ag-ttt
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_363447                460 5 +       852 ag-ttt
i Hipposideros_galeritus.HipGal_scaffold_363447          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145378 5 -    630532 aa-ttt
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73660 5 +     83186 ag-ttt
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75219 5 +    143317 ag-ttt
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               8424 5 +     12352 aa-ttt
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15611 5 +     55766 aa-ttt
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055139 5 + 191637585 aa-ttt
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804017 5 +  11177569 aa-ttt
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11055 5 -    135385 ag-ttt
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390296 5 +   7955117 ag-ctt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13107 5 -     16823 ag-ttt
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 74948 5 -     97402 ag-ttt
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45235 5 +    110728 aa-ttt
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1185 5 -     25587 ag-gtt
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                         710 5 -     23187 aa-ttt
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1023 5 -     14280 aa-ttt
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         665 5 +      3713 aa-ttt
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      855 5 +      8855 aa-ttt
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5657 5 -     13645 aa-ttt
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816544 5 -   3914936 ag-ttt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     21744 3 +     24238 ---ttt
i Lepus_americanus.LepAme_scaffold_56121                 I 3 C 0
s Lipotes_vexillifer.KE559953.1                             344289 5 +    662738 ag-ttt
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336649 5 -   1826925 ag-ttt
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                41617956 5 +  59628241 ag-ttt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48041 5 -     61512 ag-ttt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375703 5 -  60120075 ag-ttt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27971 5 +     30207 ag-ttt
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2809 5 -      5035 ag-ttt
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27924 5 +     30527 ag-ttt
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39100 5 -     50087 ag-ttt
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48845 5 +     51645 ag-ttt
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418047 5 - 187317192 ag-ttt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402278 5 +  25927173 ag-ttt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51449 5 -     62418 ag-ttt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3980 5 +     14901 ag-ttt
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47922 5 +     59329 ag-ttt
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273829 5 +    668171 ag-ttt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2461 5 -      5049 ag-ttt
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5627 5 +     17132 ag-ttt
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226311 5 -    270270 ag-ttt
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325117 5 +  24302211 ag-ttt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359948 5 -    752769 ag-ttt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676591 5 -    737560 ag-ttt
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             223888 5 +    317179 ag-ttt
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504525 5 +  40650429 ag-ctt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       153716 5 +    207569 tg-ttc
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29289 5 -     74585 ag-ttt
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90573 5 +     93471 ag-ttt
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12254 5 +     17804 aa-ttt
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12754 5 -     12984 aa-ttt
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21073 5 -     26561 aa-ttt
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188309 5 +    200668 ag-ttt
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966525 5 +  27267610 AG-TTT
i Microtus_ochrogaster.CM001695.1                        I 2 I 16
s Miniopterus_natalensis.LDJU01000034.1                    6368139 5 -   8254450 ag-ttt
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             45870 5 -     48117 ag-ttt
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25211 5 -     27822 aa-ttt
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11777 5 +     27589 ag-ttt
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362681 5 +    437263 ag-ttt
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182724 5 +    366855 ag-ttg
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  31885 5 -     82753 aa-ttt
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21774 5 -     63510 ag-ttt
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45116 5 +     47283 ag-ttt
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35597720 5 + 120012414 ag-ttt
i Mus_caroli.LT608237.1                                  I 2 I 16
s Mus_musculus.chr8                                       41691260 5 + 129401213 ag-ttt
i Mus_musculus.chr8                                      I 2 I 16
s Mus_pahari.LT608297.1                                   58219222 5 +  89631738 ag-ttt
i Mus_pahari.LT608297.1                                  I 2 I 16
s Mus_spretus.CM004101.1                                  39500179 5 + 130317789 ag-ttt
i Mus_spretus.CM004101.1                                 I 2 I 16
s Muscardinus_avellanarius.MusAve_scaffold_5560               2858 3 -    124358 ---tct
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358164 5 +  14710649 at-ttt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                       938 3 -     27262 aa-t--
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797122 5 +  10118263 ag-ttt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391296 5 +   6019432 ag-ttt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387335 5 +   4330536 ag-ttt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6122 5 +     18357 ag-ttt
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950135 5 +   3037898 ag-ttt
i Nannospalax_galili.KL204047.1                          I 2 I 7
s Nasalis_larvatus.k141_1350636                              31995 5 +     34575 aa-ttt
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469224 5 -  31847680 ag-ttt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235347 5 -   7148211 ag-ttt
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131052 5 -    149072 ag-ttt
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56312 5 -    132029 aa-ttt
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12407 5 -     16345 aa-ttt
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18296 5 +     22201 aa-ttt
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416526 5 -  22158432 aa-ttt
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28701 5 -     54323 aa-ttt
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201660 5 +   9404916 ag-ttt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059202 5 -  11899542 ag-tct
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1454993 5 +   2017862 ag-ttt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442283 5 -    630418 aa-ttt
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          21938 5 +    150152 aa-ttt
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97140 5 -    140218 ag-ttt
i Ondatra_zibethicus.OndZib_scaffold_7387                I 2 I 16
s Onychomys_torridus.OnyTor_scaffold_28377                    7682 5 -     41509 aa-ctt
i Onychomys_torridus.OnyTor_scaffold_28377               I 2 I 16
s Orcinus_orca.KB316932.1                                  8105752 5 +  10937097 ag-ttt
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108405 3 - 174332312 ---ttt
i Oryctolagus_cuniculus.CM000791.1                       I 3 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42611 5 +    559221 ag-ttt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26410680 5 -  44047080 aa-ttt
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11303 5 +     17875 aa-ttt
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  268 5 +      1186 aa-ttt
i Pan_paniscus.AJFE02001037.1                            C 0 I 25
s Pan_troglodytes.NBAG03003091.1                             16686 6 -     26668 aaattt
i Pan_troglodytes.NBAG03003091.1                         I 144 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   28243 5 -    230217 ag-ttt
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465475 5 -  18783137 ag-ttt
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976076 5 +   8748460 ag-ttt
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622198 5 +   2937107 aa-ttt
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246126 5 - 183742232 AG-TTT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12411 5 +     21308 ag-ttt
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295154 5 -  20919399 ag-ttt
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25051 5 -     27687 ag-ttt
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1730 5 +     10553 ag-ttt
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1690 5 -     10386 ag-ttt
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18413 5 +     78924 ag-ttt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7296 5 +      9367 TG-TTT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         250901 5 +  18517816 AG-CTT
i Peromyscus_maniculatus.KI615324.1                      I 2 I 16
s Petromus_typicus.PetTyp_scaffold_17301                     35294 5 -     56120 ag-ttt
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7273 5 -     63832 ag-ttt
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5373 5 +     55023 aa-ttt
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4895 5 -     89929 aa-ttt
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5485 5 +     40849 aa-ttt
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257215 5 +  14605196 aa-ttt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7616 5 +     22231 ag-gtt
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66755 5 +    207309 aa-ttt
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7849 5 -     25401 aa-ttt
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33596 5 +     58159 aa-ttt
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33872 5 +     63561 aa-ttt
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33627 5 +     51148 aa-ttt
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558602 5 -   4542175 aa-ttt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33611 5 +     51125 aa-ttt
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4294 5 +     19503 ag-ttt
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10035 5 +     39866 aa-tat
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5117 5 -      9282 aa-tat
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44521 5 -     87950 aa-tat
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44915 5 -     88961 aa-tat
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9613 5 -     39403 aa-tat
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44565 5 +     87928 aa-tat
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9612 5 -     60166 aa-tat
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16533 5 -     67232 aa-tat
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44465 5 -     90634 aa-tat
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45932 5 +     89403 aa-tat
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182073 5 - 189387572 aa-ttt
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196816 5 -   9816681 aa-ttt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30575 5 +     69807 aa-ttt
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47756 5 -     80239 aa-ttt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55392 5 -     66298 ag-ttt
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7774 5 -     18639 ag-ttt
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5843929 5 -  28871421 ag-ttt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540445 5 -   4952924 ag-ttt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102465 5 +  38429054 ag-ttt
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             29942 5 +     91421 aa-ttt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156494 5 -   7812017 aa-ttt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10794 5 +     72585 aa-ttt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4801 5 -     55207 aa-ttt
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37025839 5 -  90668790 ag-ttt
i Rattus_norvegicus.chr16                                I 2 I 16
s Rhinolophus_sinicus.LVEH01000134.1                       2917857 5 +   3329780 ag-ttt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4400 5 +      7119 ag-ttt
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125070 5 + 195417433 aa-ttt
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239242 5 -   7961872 ag-ttt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78423 5 -    116970 ag-ttt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9202 5 +     12412 aa-ttt
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               659 5 +      9876 aa-ttt
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16263 5 -     24931 AA-TTT
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1143 5 +      4564 aa-ttt
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3948 5 -      7443 aa-ttt
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394855 5 - 209938924 aa-ttt
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1563 5 +     10149 aa-ttt
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                900 5 +     10417 aa-ttt
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14250 5 +     16473 aa-ttt
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111029 5 + 121099817 ag-ttt
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32599 5 -     47369 ag-ttt
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32983 5 -     79414 AA-TTT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29674 5 -     34454 AA-TTT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17076 5 -     22428 AA-TTT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32229 5 -     47109 ag-ttt
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240254 5 +   5703754 aa-ttt
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9845 5 +     21866 aa-ttt
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122262 5 +    313613 ag-ttt
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1381 5 +     11297 aa-ttt
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31774 5 +     58920 aa-ttt
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18272 5 -     45317 aa-ttt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25930 5 -     42441 aa-ttt
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28606 5 -     29113 aa-ttt
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31683 5 -     48123 aa-ttt
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52686 5 +     77746 ag-ttt
i Sigmodon_hispidus.SigHis_scaffold_20193                I 2 I 16
s Solenodon_paradoxus.SolPar_flattened_line_126            1867048 5 -   1910179 ag-ttt
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674303 5 +  18376816 aa-ttt
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1871866 5 +   3870691 cg-ctt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             15997 5 -     97271 ag-ttt
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128623 5 +    196729 ag-ttt
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6647883 5 +  69701581 aa-ttt
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393783 5 +   1523678 aa-ttt
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17345 5 +     22964 ag-ttt
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194724 5 +    199430 ag-ttt
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108704 5 -    539355 ag-ttt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4333 5 +      9917 ag-ttt
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11129 5 +     20590 ag-ttt
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355935 5 - 186847797 ag-ttt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27572 5 -     33621 ag-ttt
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483647 5 -    610378 ag-ttt
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23682 5 +     26378 aa-ttt
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36481 5 -     78344 aa-ttt
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23007 5 +     25722 aa-ttt
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31437 5 -     62838 aa-ttt
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31428 5 +     46913 aa-ttt
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12165 5 -     28527 aa-ttt
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33368 5 -     64340 aa-ttt
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31406 5 -     63452 aa-ttt
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12857 5 +     22490 aa-ttt
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          823 5 +      9911 aa-ttt
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          618 5 -     33539 aa-ttt
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258377 5 -   6242583 aa-ttt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4396 5 +     19340 aa-ttt
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177511 5 -    200418 ag-cct
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839281 5 -   4065304 ag-ttt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13375 5 -     70247 ag-ttt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17368876 5 -  33153633 ag-ttt
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7109 5 -     21056 at-tta
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185200 5 +   5085361 ag-ttt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   79408 5 +   5488506 ag-ttt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108554 5 -    112863 ag-ttt
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        177747 5 -    224448 ag-ttt
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32200 5 -     86975 ag-ttt
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       4082 5 -     63895 AG-TTT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 111 I 418
s Ziphius_cavirostris.ZipCav_flattened_line_334639             837 5 +      3447 ag-ttt
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_510450               1901 278 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    49396 73 +    145209 I
e Echinops_telfairi.JH980293.1                            62858214 80 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               2589 223 +     11607 I
e Elephantulus_edwardii.JH947257.1                         9113279 68 -  10337057 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            609346 87 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                 1866 90 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   22296 79 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2112554 81 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            15196 81 -     19938 I
e Trichechus_manatus.JH594705.1                            6485301 82 -  10818551 I
e Psammomys_obesus.NESX01036366.1                            40656 0 +     52041 C
e Procavia_capensis.ProCapCap_scaffold_128773                 2495 82 -     12774 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53122 0 -    140813 C
e Loxodonta_africana.GL010049.1                           39087697 84 +  43346337 I
e Jaculus_jaculus.JH725527.1                               1242424 337 +   9596543 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                5963 82 +      8654 I
e Allactaga_bullata.AllBul_scaffold_20030                    20875 333 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28723 2 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9743 25 +     36723 AATTCAC----------A-G---G-CTCC-----A---G-C-A-CA--ACA-TG
s Acinonyx_jubatus.LLWD01001279.1                           816244 27 +   1699592 aattcac----------a-g---tgcctc-----a---gat-g-ca--gaa-tg
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 20
s Acomys_cahirinus.AcoCah_scaffold_21377                     28725  8 +     63021 T-GTTCT----------T-A----------------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 2 I 17
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418749 26 +  29979442 aattcac----------a-g---ggc-tc-----a---gac-a-ca--gaa-ta
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 19
s Ailurus_fulgens.LNAC01001112.1                            218749 27 +    347723 aattcac----------a-g---ggcttc-----a---gac-a-ca--gaa-ta
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 21
s Allactaga_bullata.AllBul_scaffold_20030                    21208  9 -     61208 TGACCTT----------C-A----------------------------------
i Allactaga_bullata.AllBul_scaffold_20030                I 333 I 300
s Allenopithecus_nigroviridis.k141_3755588                   50689 25 +     53615 aattcac----------a-g---g-tccc-----a---g-c-a-ca--aaa-tc
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2716 25 +     13857 aattcac----------c-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19271 25 -     21945 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20956 25 +     32033 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74220 25 -     84148 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46462 25 -     78289 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45888 25 +     55831 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44350 25 -     64179 aattcac----------a-g---g-cccc-----a---g-a-a-ta--aaa-tc
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1457 25 -      3959 aattcac----------a-g---c-cccc-----a---g-a-a-ca--aaa-tc
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             42975 25 +     45454 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48623 25 +     70886 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10794 25 +     30854 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34930 25 +     42133 aattcac----------a-a---g-cccc-----a---g-a-a-ta--aaa-tc
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1591944 26 +   2318259 aattcat----------a-g---g-tccc-----a---gat-a-ca--gaa-ta
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 26
s Anoura_caudifer.AnoCau_scaffold_1412                      180354 25 -    412891 aattcac----------a-g---g-c-ac-----a---gac-a-aa--gaa-ta
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53102 26 -     68529 aattcat----------a-g---g-tccc-----a---tat-a-ca--gaa-ta
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 24
s Aotus_azarae.k141_887050                                    3171 25 +     17741 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tg
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3796 25 -     15923 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tg
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674078 25 +   5030052 aattcAC----------A-G---G-CCCC-----A---G-A-A-CA--AAA-TG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4072 25 -     16391 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tg
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3631 25 -     17186 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tg
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27191 41 -     32367 aattaactACTACTATTA-AATTA-A-AT-----TTAATTC-A-TG--AAA-TA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  8868 25 -     15198 aattcac----------a-g---g-c-ac-----a---gac-a-aa--gaa-ta
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276690 25 +  21539123 aatttac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12856 25 +     48076 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   7994 25 -     28759 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35547 25 +     44353 aatttac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50918 25 -     71267 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24974 25 -     33135 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966604 26 -  23207421 aattcac----------a-g---g-cccc-----a---gat-a-ca--gaa-ta
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3105 26 -     25979 aattcac----------a-g---g-cccc-----a---gat-a-ca--gaa-ta
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     92933 26 +    124022 aattcat----------a-g---g-tccc-----a---aat-a-ca--gaa-ta
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 26
s Bison_bison.KN261452.1                                     36132 26 +    288883 aattcat----------a-g---g-tccc-----a---gtt-a-ca--gaa-ta
i Bison_bison.KN261452.1                                 C 0 I 27
s Bos_indicus.CM003047.1                                  28423272 26 -  48749331 aattcnt----------a-g---g-tccc-----a---gtt-a-ta--gaa-ta
i Bos_indicus.CM003047.1                                 C 0 I 27
s Bos_mutus.JH880303.1                                      768873 26 +   1948126 aattcat----------a-g---g-tccc-----a---gtt-a-ca--gaa-ta
i Bos_mutus.JH880303.1                                   C 0 I 27
s Bos_taurus.CM000203.6                                   27559418 26 -  45695690 aattcat----------a-g---g-tccc-----a---gtt-a-ta--gaa-ta
i Bos_taurus.CM000203.6                                  C 0 I 27
s Bubalus_bubalis.KI419123.1                               1536099 26 -   4408762 aattcat----------a-g---g-tccc-----a---gat-a-ca--gaa-ta
i Bubalus_bubalis.KI419123.1                             C 0 I 27
s Cacajao_ayresi.k141_96119                                   9781 25 +     28062 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45072 25 -     91139 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22599 25 +     95584 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22512 25 +    119600 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12159 25 +     18648 aattcac----------g-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11667 25 -     13885 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3766 25 -      8861 aattcac----------g-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456158 25 + 189096842 AATTCAC----------G-G---G-CCCC-----A---G-A-A-CA--AAA-TC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3680 25 +      8664 aattcac----------g-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7634021 26 +  17673402 aattcac----------a-g---a-cccc-----a---gat-a-ca--gac-ta
i Camelus_bactrianus.KN276810.1                          C 0 I 17
s Camelus_dromedarius.KN272107.1                           4668322 26 +   7040546 aattcac----------a-g---a-cccc-----a---gat-a-ca--gac-ta
i Camelus_dromedarius.KN272107.1                         C 0 I 17
s Camelus_ferus.KB017975.1                                 1212010 26 +   1652518 aattcac----------a-g---a-cccc-----a---gat-a-ca--gac-ta
i Camelus_ferus.KB017975.1                               C 0 I 17
s CanFam4.chr16                                           42508693 27 +  60362399 aattcac----------a-g---ggcttc-----a---gac-a-aa--gaa-aa
i CanFam4.chr16                                          C 0 I 25
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12328 27 -     23171 aattcac----------a-g---ggcttc-----a---gac-a-aa--gaa-aa
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 25
s Canis_lupus_dingo.QKWQ01000480.1                          225669 27 +   9314153 aattcac----------a-g---ggcttc-----a---gac-a-aa--gaa-aa
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 25
s Canis_lupus_familiaris.chr16                            41618806 27 +  59632846 aattcac----------a-g---ggcttc-----a---gac-a-aa--gaa-aa
i Canis_lupus_familiaris.chr16                           C 0 I 25
s Canis_lupus_orion.HG994398.1                            45110387 27 -  63665305 aattcac----------a-g---ggcttc-----a---gac-a-aa--gaa-aa
i Canis_lupus_orion.HG994398.1                           C 0 I 25
s Capra_aegagrus.CM003241.1                               27415948 26 -  46296322 aattcat----------a-g---g-tccc-----a---gat-a-ca--gaa-ta
i Capra_aegagrus.CM003241.1                              C 0 I 26
s Capra_hircus.CM004588.1                                 26597945 26 +  44709034 aattcat----------a-g---g-tccc-----a---gat-a-ca--gaa-ta
i Capra_hircus.CM004588.1                                C 0 I 26
s Capromys_pilorides.CapPil_scaffold_26391                    1876 23 -     20114 --ttcac----------a-g---g-c-tt-----c---agg-a-ca--aaa-tc
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274147 26 +    496798 AATTCAC----------A-G---G-TCCC-----A---GTC-A-TA--AAA-TC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               3742 25 +      9923 aattcac----------a-g---g-c-ac-----a---gac-a-aa--gaa-ta
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31454 12 -     39886 ----------------------------------g---aac-a-ca--aaa-tc
i Castor_canadensis.CasCan_scaffold_39952                I 9 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     82942 26 -    217609 aattcac----------a-g---g-ccca-----a---gaa-a-ca--gaa-ca
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4999849 26 +  23392119 NNNNNNN----------N-N---N-N-NN-----N---NNN-N-NN-NNNN-NN
i Cavia_aperea.AVPZ01000300.1                            C 0 I 57
s Cavia_porcellus.DS562891.1                               5003290 26 +  23407841 aattcat----------g-a---a-c-tt-----a---ggg-a-caa-aaa-tc
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_23560                       66367 26 -     66877 aattcat----------g-a---a-c-tt-----a---ggg-a-caa-aaa-tc
i Cavia_tschudii.CavTsc_scaffold_23560                   C 0 N 0
s Cebuella_niveiventris.k141_592277                           7079 25 -     12580 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45135 25 +     53515 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  375868 25 -  26074798 aattcac----------a-g---g-cccc-----a---t-a-a-ca--aaa-tc
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                                9939 25 -     34880 aattcac----------a-g---g-cccc-----a---t-a-a-ca--aaa-tc
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69035 25 -     89041 aattcac----------a-g---g-cccc-----a---t-a-a-ca--aaa-tc
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         1810 26 -     76265 aattcac----------a-g---g-cccc-----a---gcc-a-ta--aaa-tc
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495272 26 -  27778364 aattcac----------a-g---g-cccc-----a---gat-a-ct--gaa-ta
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22105 26 +     27315 aattcac----------a-g---g-cccc-----a---gat-a-ct--gaa-ta
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143772 25 -   4669795 aattCAC----------A-G---G-CCCC-----A---G-C-A-CA--AAA-TC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47511 25 +     47900 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2944 25 -     14410 aattcac----------a-g---g-cccc-----a---g-c-g-ca--aaa-tc
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47326 25 -    148725 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29604 25 -     40656 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9563 25 +     20796 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14676 25 -     17524 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30409 25 -     34525 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14187 25 -     25376 aattcac----------a-g---g-cccc-----a---g-c-t-ca--aaa-tc
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366776 25 -  39242232 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272501 25 +  21565898 aattcac----------a-g---g-cccc-----a---g-c-t-ca--aaa-tc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34868 25 -     45857 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29769 25 -     32606 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5930 25 +      8499 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28329 25 +     70610 aattcac----------a-g---g-cccc-----a---g-c-t-ca--aaa-tc
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25291 25 +     36323 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10867 25 -     32913 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21280 25 -     40346 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21534 25 +    216457 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21324 25 +     39636 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33310 25 -     52013 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44413 25 -    112038 agttcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9963 25 +     34062 agttcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346191 25 +  18827391 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12730 25 -     44032 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307577 25 - 135778131 aattcac----------A-G---G-CCCC-----A---G-C-A-CA--AAA-TC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             411985 25 -   2368649 aattCAC----------A-G---G-CCCC-----A---G-C-A-CA--AAA-TC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381867 25 - 200372422 aattcac----------a-g---g-ctcc-----a---g-c-a-ca--aaa-tc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5419 25 -     84244 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810476 11 +  53390261 --------------------------------------gaa-a-ca--aaa-ta
i Condylura_cristata.JH655891.1                          I 8 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6024 26 -      8242 aatttac----------a-c---a-cccc-----a---gac-a-ca--gaa-ta
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47419  9 -     83289 tggttat----------c-a----------------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             I 15 I 16
s Cricetulus_griseus.LT883664.1                          213118932  9 - 224834208 tggtcat----------c-T----------------------------------
i Cricetulus_griseus.LT883664.1                          I 16 I 17
s Crocidura_indochinensis.CroInd_scaffold_77846              12283 26 +     12657 aaCGCCT----------A-C---G-ATCA-----A---TAC-A-GA--AAA-TA
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7628 27 +     87169 aattcac----------a-g---ggcctc-----a---gat-g-aa--gaa-ta
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 20
s Ctenodactylus_gundi.CteGun_scaffold_65                    649904 25 -   1526836 aattcat----------a-g---g-a-cc-----c---agc-a-ca--aaa-tc
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22548 25 +     50838 aattcac----------a-g---g-c-tt-----c---AGG-A-CA--AAG-TA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12036 25 +     36344 aattcac----------a-a---a-c-tt-----c---agg-a-ca--aaa-tc
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31477 25 +     75252 aattcac----------g-a---a-c-tt-----c---agg-a-ca--aac-tc
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635008 26 -  35494412 aattcac----------a-g---g-cccc-----a---gat-a-ca--gaa-ta
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11868734 25 -  20541912 aattcac----------a-g---g-c-ac-----a---gac-a-ca--gaa-ta
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667543 26 -   1390856 aattcac----------a-g---g-cccc-----a---gat-a-ct--gaa-ta
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142345 26 -    198055 aattcac----------a-g---g-cccc-----a---gat-a-ct--gaa-ta
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955093  9 -  37912305 aattcac----------a-g----------------------------------
i Dipodomys_ordii.KN672350.1                             C 0 I 10
s Dipodomys_stephensi.DipSte_scaffold_89095                  10007  9 -     10735 AATGCAC----------A-G----------------------------------
i Dipodomys_stephensi.DipSte_scaffold_89095              C 0 N 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 12608 26 +     14636 aattcat----------g-a---a-c-tt-----a---agg-a-caa-aaa-tc
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9382 24 +     19438 aatttat----------a-t---a-acca-----a---gac-a-t----aa-ta
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       245733 26 -    607251 agttcat----------a-g---t-tccc-----a---gat-a-ca--gaa-ta
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35131  9 +    110024 TGGTCAT----------T-G----------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      I 16 I 17
s Ellobius_talpinus.LOJH01026522.1                           17060  9 +     18970 TGGTCAT----------T-G----------------------------------
i Ellobius_talpinus.LOJH01026522.1                       I 16 I 17
s Enhydra_lutris.KZ291758.1                               24925242 27 +  41312741 aattcac----------a-g---ggcttc-----a---gac-a-ca--ata-ta
i Enhydra_lutris.KZ291758.1                              C 0 I 61
s Eptesicus_fuscus.JH977646.1                             12582513 15 +  14770903 aattcac----------a-g---g-cccc-----a-------------------
i Eptesicus_fuscus.JH977646.1                            C 0 I 27
s Equus_asinus.JREZ01000139.1                              3045011 26 -   4378816 aattcac----------a-g---g-tccc-----a---gat-a-cc--gaa-cg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21378941 26 +  39960074 aattcac----------a-g---g-tccc-----a---gat-a-cc--gaa-cg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              414923 26 -    498745 aattcac----------a-g---g-tccc-----a---gat-a-cc--gaa-cg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671236 26 +   7059049 aatgcac----------a-g---g-aaac-----a---gac-a-ca--aaa-ta
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265719 25 +  21539334 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74218 26 -    133382 aattcac----------a-g---g-cccc-----a---gat-a-ca--gaa-ta
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              1933 26 +     25849 aattcac----------a-g---g-cccc-----a---gat-a-ca--gac-ta
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250246 27 - 206538554 aattcac----------a-g---tgcctc-----a---gat-g-ca--gaa-tg
i Felis_catus.CM001381.2                                 C 0 I 20
s Felis_catus_fca126.CM031415.1                          185120202 27 - 205367284 aattcac----------a-g---tgcctc-----a---gat-g-ca--gaa-tg
i Felis_catus_fca126.CM031415.1                          C 0 I 20
s Felis_nigripes.FelNig_flattened_line_44075                   844 27 +     25330 aattcac----------a-g---tgcctc-----a---gat-g-ca--gaa-tg
i Felis_nigripes.FelNig_flattened_line_44075             C 0 I 20
s Fukomys_damarensis.KN121974.1                            2925842 27 -   3816255 aattcat----------g-g---g-c-tc-----c---agg-a-aaaaaaa-tc
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                4805 26 -     28519 aattcac----------a-g---c-ctcc-----a---gcc-a-ca--aga-tc
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       1992 26 +    660261 aattcat----------a-g---g-tccc-----a---gat-a-ca--gaa-ta
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 26
s Glis_glis.GliGli_scaffold_163929                            4831 25 -      6791 aattcat----------g-g---a-c-cc-----a---gac-a-ca--aaa-tc
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_935316                                 824 25 +     34797 aattcac----------a-g---g-ctcc-----a---g-c-a-ca--aaa-tg
i Gorilla_beringei.k141_935316                           I 10 I 71
s Gorilla_gorilla.LT578336.1                                 75411 25 +  33314783 aattcac----------a-g---g-ctcc-----a---g-c-a-ca--aaa-tg
i Gorilla_gorilla.LT578336.1                             I 58 I 71
s Graphiurus_murinus.GraMur_scaffold_10447                    6746 25 -     78134 aattcat----------g-g---a-c-ct-----a---gac-a-ta--caa-ta
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34030 27 -    327341 aattcac----------a-g---ggcctc-----a---gat-g-aa--gaa-ta
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 20
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15659 26 +     48891 aattcat----------a-g---g-tccc-----a---gat-a-ca--gaa-ta
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 26
s Heterocephalus_glaber.JH602082.1                         1938283 25 -  22651954 aattcat----------g-g---g-c-tc-----c---agg-a-aa--aaa-tc
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11046 26 -     36432 aatccac----------a-g---a-ccct-----a---cat-a-ca--gaa-ta
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556096 26 -   1711038 aattcac----------a-g---a-cccc-----a---gac-a-ca--gaa-ta
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 21
s Hipposideros_galeritus.HipGal_scaffold_363447                465 26 +       852 aattcac----------a-g---a-cccc-----a---gac-a-ca--gaa-ta
i Hipposideros_galeritus.HipGal_scaffold_363447          C 0 I 68
s Hoolock_leuconedys.ctg274                                    145383 25 -    630532 aattcac----------a-g---g-ctcc-----a---g-c-a-ca--aaa-tg
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73665 27 +     83186 aattcac----------a-g---ggcctc-----a---gac-a-ca--gaa-ta
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 20
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75224 25 +    143317 aattcat----------g-a---g-c-tt-----a---agg-a-caa--aa-tc
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               8429 25 +     12352 aattcac----------a-g---g-ctcc-----a---g-c-a-ca--aaa-tg
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15616 25 +     55766 aattcac----------a-g---g-ctcc-----a---g-c-a-ca--aaa-tg
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055144 25 + 191637585 aattcac----------a-g---g-ctcc-----a---g-c-a-ca--aaa-tg
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804022 25 +  11177569 aattcac----------a-g---g-ctcc-----a---g-c-a-ca--aaa-tg
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11060 25 -    135385 aattcac----------a-g---g-c-ta-----t---ggg-a-ca--aaa-tc
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390301 33 +   7955117 atttcac----------a-a---a-a-attaagtttaactc-a-ca--gaa-tc
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13112 26 -     16823 aattcac----------a-g---g-cccc-----a---gat-a-ca--gaa-ta
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1242761  9 +   9596543 TGACCTT----------C-A----------------------------------
i Jaculus_jaculus.JH725527.1                             I 337 I 296
s Kogia_breviceps.KogBre_flattened_line_3970                 74953 26 -     97402 aattcac----------a-g---a-cccc-----a---gat-a-ca--gaa-ta
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45240 25 +    110728 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1190 26 -     25587 aattcac----------a-g---g-cccc-----a---gac-a-ca--gaa-ta
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 I 67
s Leontocebus_fuscicollis.k141_3470480                         715 25 -     23187 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1028 25 -     14280 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         670 25 +      3713 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      860 25 +      8855 aattcat----------g-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5662 25 -     13645 aattcat----------g-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816549 27 -   3914936 aattcac----------a-g---ggcttc-----a---gac-a-ca--gaa-ta
i Leptonychotes_weddellii.KB714746.1                     C 0 I 19
s Lepus_americanus.LepAme_scaffold_56121                     21747 26 +     24238 attttat----------aag---c-c-cc-----a---aat-a-ca--aaa-tc
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 21
s Lipotes_vexillifer.KE559953.1                             344294 26 +    662738 aattcac----------a-g---g-cccc-----a---gat-a-ca--gaa-ta
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336654 25 -   1826925 aattcac----------a-g---g-cacc-----a---g-c-a-ca--aaa-tc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                41617961 27 +  59628241 aattcac----------a-g---ggcttc-----a---gac-a-aa--gaa-aa
i Lycaon_pictus.CM007581.1                               C 0 I 25
s Macaca_arctoides.k141_1757516                              48046 25 -     61512 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375708 25 -  60120075 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                27976 25 +     30207 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2814 25 -      5035 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27929 25 +     30527 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39105 25 -     50087 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48850 25 +     51645 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418052 25 - 187317192 aattCAC----------A-G---G-CCCC-----A---G-C-A-CA--AAA-TC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402283 25 +  25927173 aattCAC----------A-G---G-CCCC-----A---G-C-A-CA--AAA-TC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51454 25 -     62418 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 3985 25 +     14901 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47927 25 +     59329 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273834 25 +    668171 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2466 25 -      5049 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5632 25 +     17132 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226316 24 -    270270 aatttac----------a-t---a-cttc-----a---gac-a-t----aa-ta
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325122 25 +  24302211 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359953 25 -    752769 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676596 26 -    737560 aatttgc----------a-g---a-aacc-----a---gac-a-ct--gaa-ta
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             223893 26 +    317179 aatttgc----------a-g---a-accc-----a---gac-a-ct--gaa-ca
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504530 33 +  40650429 atttcac----------a-a---a-a-attaagtttaactc-a-ca--aaa-tc
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       153721 26 +    207569 aattcac----------a-g---a-cccc-----a---gac-a-ca--gaa-ta
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 8
s Mellivora_capensis.MelCap_flattened_line_19308             29294 27 -     74585 aattcac----------a-g---ggcttc-----a---gac-a-ca--gaa-ta
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 21
s Meriones_unguiculatus.MerUng_scaffold_7390                 53122  6 -    140813 ---CCCT----------T-G----------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 17
s Mesoplodon_bidens.MesBid_scaffold_6114                     90578 26 +     93471 aattcac----------a-g---g-ccac-----a---gat-a-ca--gaa-ta
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 22
s Mico_argentatus.k141_582562                                12259 25 +     17804 aattcac----------g-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12759 25 -     12984 aattcac----------g-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Mico_humeralifer.k141_1180625                          C 0 I 34
s Mico_schneideri.k141_1877700                                     21078 25 -     26561 aattcac----------g-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188314 25 +    200668 aattcac----------a-g---a-c-ac-----a---gac-a-aa--gaa-ta
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966546  9 +  27267610 TGGTCCT----------T-G----------------------------------
i Microtus_ochrogaster.CM001695.1                        I 16 I 17
s Miniopterus_natalensis.LDJU01000034.1                    6368144 26 -   8254450 aattcac----------a-g---g-ccac-----a---gac-a-ca--gaa-ta
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             45875 26 -     48117 aattcac----------a-g---g-ccac-----a---gac-a-ca--gaa-ta
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25216 25 -     27822 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11782 27 +     27589 aattcac----------a-g---ggcttc-----a---gac-a-ca--gaa-ta
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 19
s Monodon_monoceros.MonMon_M_scaffold_103                   362686 26 +    437263 aattcac----------a-g---g-cccc-----a---gat-g-ca--gaa-ta
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182729 26 +    366855 aattcac----------a-g---g-cctc-----a---gaa-g-ga--gaa-ta
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  31890 26 -     82753 aattcat----------a-g---g-tccc-----a---gat-a-ca--gaa-ta
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 26
s Mungos_mungo.MunMun_flattened_line_18455                   21779 27 -     63510 aattcac----------a-g---gacctc-----a---gat-g-ga--gaa-ta
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 20
s Murina_feae.MurFea_scaffold_17764                          45121 26 +     47283 aatccac----------a-g---g-cccc-----a---gac-t-ca--gaa-ta
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35597741  9 + 120012414 tgctcct----------t-g----------------------------------
i Mus_caroli.LT608237.1                                  I 16 I 17
s Mus_musculus.chr8                                       41691281  9 + 129401213 tgctcct----------t-g----------------------------------
i Mus_musculus.chr8                                      I 16 I 17
s Mus_pahari.LT608297.1                                   58219243  9 +  89631738 tggtctt----------t-g----------------------------------
i Mus_pahari.LT608297.1                                  I 16 I 17
s Mus_spretus.CM004101.1                                  39500200  9 + 130317789 tgctcct----------t-g----------------------------------
i Mus_spretus.CM004101.1                                 I 16 I 17
s Muscardinus_avellanarius.MusAve_scaffold_5560               2861 24 -    124358 aattcat----------g-g---g-c-ct-----g---ggc-a-ca--aaa-t-
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358169 27 +  14710649 aattcac----------a-g---gtcttc-----a---gac-a-ca--gaa-ta
i Mustela_putorius.JH418006.1                            C 0 I 21
s Myocastor_coypus.MyoCoy_scaffold_57531                       941 23 -     27262 --ttcac----------a-g---g-c-tt-----c---agg-a-ca--aaa-tc
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797127 26 +  10118263 aattcac----------a-g---g-cccc-----a---gac-a-ca--gaa-ta
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391301 26 +   6019432 aattcac----------a-g---g-cccc-----a---gac-a-ca--gaa-ta
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387340 26 +   4330536 aattcac----------a-g---g-cccc-----a---gac-a-ca--gaa-ta
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6127 26 +     18357 aattcac----------a-g---g-cccc-----a---gac-a-ca--gaa-ta
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950147  9 +   3037898 tggtcTT----------T-G----------------------------------
i Nannospalax_galili.KL204047.1                          I 7 I 17
s Nasalis_larvatus.k141_1350636                              32000 25 +     34575 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469229 27 -  31847680 aattcac----------a-g---ggcttc-----a---gac-a-ca--gaa-ta
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 19
s Neophocaena_asiaeorientalis.KZ687982.1                   1235352 26 -   7148211 aattcac----------a-g---g-cccc-----a---gat-a-ca--gaa-ta
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131057 26 -    149072 cattcac----------a-g---g-cccc-----a---gac-g-aa--gga-ta
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56317 25 -    132029 aattcac----------a-g---g-ctcc-----a---g-c-a-ca--aaa-tg
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12412 25 -     16345 aattcac----------a-g---g-ctcc-----a---g-c-a-ca--aaa-tg
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18301 25 +     22201 aattcac----------a-g---g-ctcc-----a---g-c-a-ca--aaa-tg
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416531 25 -  22158432 aattcac----------a-g---g-ctcc-----a---g-c-a-ca--aaa-tg
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28706 25 -     54323 aattcac----------a-g---g-ctcc-----a---g-c-a-ca--aaa-tg
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201665 27 +   9404916 aattcac----------a-g---ggcttc-----a---gac-a-aa--gaa-aa
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 25
s Octodon_degus.JH651603.1                                11059207 25 -  11899542 aattcac----------c-g---a-c-tt-----c---agg-a-ca--aaa-tc
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1454998 27 +   2017862 aattcac----------a-g---ggcttc-----a---gac-a-ca--gaa-ta
i Odobenus_rosmarus.KB229312.1                           C 0 I 19
s Odocoileus_virginianus.KZ100018.1                         442288 26 -    630418 agttcat----------a-g---t-cccc-----a---gat-a-cg--gaa-ta
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          21943 26 +    150152 aattcat----------a-g---g-tccc-----a---gat-a-ca--gaa-ta
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 26
s Ondatra_zibethicus.OndZib_scaffold_7387                    97161  9 -    140218 tggtcat----------t-g----------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                I 16 I 17
s Onychomys_torridus.OnyTor_scaffold_28377                    7703  9 -     41509 tggtcgt----------t-g----------------------------------
i Onychomys_torridus.OnyTor_scaffold_28377               I 16 I 17
s Orcinus_orca.KB316932.1                                  8105757 26 +  10937097 aattcac----------a-g---g-cccc-----a---gat-a-ca--gaa-ta
i Orcinus_orca.KB316932.1                                C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108408 26 - 174332312 attttat----------aag---c-c-cc-----a---aat-a-ca--aaa-tt
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 21
s Otocyon_megalotis.JAEUCK010005147.1                        42616 27 +    559221 aattcac----------a-g---ggcttc-----a---gac-a-aa--gaa-aa
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 24
s Ovis_aries.CM001607.2                                   26410685 26 -  44047080 aattcat----------a-g---g-tccc-----a---gat-a-ca--gaa-ta
i Ovis_aries.CM001607.2                                  C 0 I 26
s Ovis_canadensis.OviCan_scaffold_67953                      11308 26 +     17875 aattcat----------a-g---g-tccc-----a---gat-a-ca--gaa-ta
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 26
s Pan_paniscus.AJFE02004363.1                                  312 25 +      1263 aattcac----------A-G---G-CTCC-----A---G-C-A-CA--AAA-TG
i Pan_paniscus.AJFE02004363.1                            I 83 I 207
s Pan_troglodytes.NBAG03003091.1                             16692 26 -     26668 aattcac----------A-G---G-CTCC-----A---G-C-A-CA--AAAATG
i Pan_troglodytes.NBAG03003091.1                         C 0 I 71
s Panthera_onca.PanOnc_flattened_line_3271                   28248 27 -    230217 aattcac----------a-g---tgcctc-----a---gat-g-ca--gaa-tg
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 20
s Panthera_pardus.KV860321.1                              18465480 27 -  18783137 aattcac----------a-g---tgcctc-----a---gat-g-ga--gaa-tg
i Panthera_pardus.KV860321.1                             C 0 I 20
s Panthera_tigris.KE722367.1                               3976081 27 +   8748460 aattcac----------a-g---tgcctc-----a---gat-g-ca--gaa-tg
i Panthera_tigris.KE722367.1                             C 0 I 20
s Pantholops_hodgsonii.KE114653.1                          1622203 26 +   2937107 aattcat----------a-g---g-tccc-----a---gat-a-ca--gaa-ta
i Pantholops_hodgsonii.KE114653.1                        C 0 I 26
s Papio_anubis.CM001495.2                                   246131 25 - 183742232 AATTCAC----------A-G---G-CACC-----A---G-C-A-CA--AAA-TC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12416 25 +     21308 aattcac----------a-g---g-cacc-----a---g-c-a-ca--aaa-tc
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295159 25 -  20919399 aattcac----------a-g---g-cacc-----a---g-c-a-ca--aaa-tc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25056 25 -     27687 aattcac----------a-g---g-cacc-----a---g-c-a-ca--aaa-tc
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1735 25 +     10553 aattcac----------a-g---g-cacc-----a---g-c-a-ca--aaa-tc
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1695 25 -     10386 aattcac----------a-g---g-cacc-----a---g-c-a-ca--aaa-tc
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18418 27 +     78924 aattcac----------a-g---ggcctc-----a---gac-a-ca--gaa-ta
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 20
s Perognathus_longimembris.PerPac_flattened_line_89005        7301  9 +      9367 AGTTCAC----------A-G----------------------------------
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 10
s Peromyscus_maniculatus.KI615324.1                         250922  9 +  18517816 TGGTCAT----------C-A----------------------------------
i Peromyscus_maniculatus.KI615324.1                      I 16 I 17
s Petromus_typicus.PetTyp_scaffold_17301                     35299 26 -     56120 aattcac----------a-a---g-c-tc-----t---ggg-ttaa--aaa-tt
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7278 26 -     63832 aattcac----------a-g---g-cccc-----a---gat-a-ca--gaa-ta
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5378 25 +     55023 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4900 25 -     89929 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5490 25 +     40849 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257220 25 +  14605196 aattCAC----------A-G---G-CCCC-----A---G-C-A-CA--ACA-TC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7621 26 +     22231 aattcac----------a-g---g-cccc-----a---gac-a-ca--gaa-ta
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 24
s Pithecia_albicans.k141_1239476                             66760 24 +    207309 aattcac----------a-g---g--ccc-----a---g-a-a-ca--aaa-tc
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7854 25 -     25401 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33601 24 +     58159 aattcac----------a-g---g--ccc-----a---g-a-a-ca--aaa-tc
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33877 24 +     63561 aattcac----------a-g---g--ccc-----a---g-a-a-ca--aaa-tc
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33632 24 +     51148 aattcac----------a-g---g--ccc-----a---g-a-a-ca--aaa-tc
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558607 25 -   4542175 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33616 24 +     51125 aattcac----------a-g---g--ccc-----a---g-a-a-ca--aaa-tc
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4299 26 +     19503 aattcac----------a-g---g-cccc-----a---gat-a-ca--gaa-ta
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10040 25 +     39866 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5122 25 -      9282 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44526 25 -     87950 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44920 25 -     88961 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9618 25 -     39403 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44570 25 +     87928 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9617 25 -     60166 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16538 25 -     67232 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44470 25 -     90634 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45937 25 +     89403 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182078 25 - 189387572 aattCAC----------A-G---G-CTCC-----A---G-C-A-CA--AAA-TG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196821 25 -   9816681 aattcac----------a-g---g-ctcc-----a---g-c-a-ca--aaa-tg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30580 25 +     69807 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47761 25 -     80239 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Psammomys_obesus.NESX01036366.1                            40656  6 +     52041 ---CCCT----------T-G----------------------------------
i Psammomys_obesus.NESX01036366.1                        C 0 I 17
s Pteronotus_parnellii.KE847780.1                            55397 14 -     66298 aattcac----------a-g---g-cccc-------------------------
i Pteronotus_parnellii.KE847780.1                        C 0 I 8
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7779 27 -     18639 aattcac----------a-g---ggcttc-----a---gac-a-ca--gaa-ta
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 21
s Pteropus_alecto.KB030862.1                               5843934 24 -  28871421 aatttac----------a-t---a-cccc-----a---gac-a-t----aa-ta
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540450 24 -   4952924 aatttgc----------a-t---a-cccc-----a---gac-a-t----aa-ta
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102470 27 +  38429054 aattcac----------a-g---tgcctc-----a---gat-g-ca--gaa-tg
i Puma_concolor.QAVW01001104.1                           C 0 I 20
s Pygathrix_cinerea.k141_1153803                             29947 25 +     91421 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156499 25 -   7812017 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10799 25 +     72585 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4806 26 -     55207 agttcat----------a-g---t-tccc-----a---gat-a-tg--gaa-ta
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37025860  9 -  90668790 tagttct----------t-g----------------------------------
i Rattus_norvegicus.chr16                                I 16 I 17
s Rhinolophus_sinicus.LVEH01000134.1                       2917862 26 +   3329780 aattcac----------a-g---a-cctc-----a---gac-a-ca--gaa-ta
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 21
s Rhinopithecus_bieti.k119_778604                             4405 25 +      7119 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125075 25 + 195417433 aattCAC----------A-G---G-CCCC-----A---G-C-A-CA--AAA-TC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239247 25 -   7961872 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78428 24 -    116970 aatttac----------a-t---a-cccc-----a---gac-a-t----aa-ta
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9207 25 +     12412 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               664 25 +      9876 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16268 25 -     24931 AATTCAC----------A-G---G-CCCC-----A---G-A-A-CA--AAA-TC
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1148 25 +      4564 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               3953 25 -      7443 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394860 25 - 209938924 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1568 25 +     10149 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                905 25 +     10417 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14255 26 +     16473 aattcat----------a-g---g-tccc-----a---gat-a-ca--gaa-ta
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 26
s Saimiri_boliviensis.NW_024100920.1                       1111034 25 + 121099817 aattcAC----------A-G---G-CCCC-----A---G-A-A-CA--AAA-TC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32604 25 -     47369 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              32988 25 -     79414 AATTCAC----------A-G---G-CCCC-----A---G-A-A-CA--AAA-TC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29679 25 -     34454 AATTCAC----------A-G---G-CCCC-----A---G-A-A-CA--AAA-TC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17081 25 -     22428 AATTCAC----------A-G---G-CCCC-----A---G-A-A-CA--AAA-TC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32234 25 -     47109 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240259 25 +   5703754 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9850 25 +     21866 aattcac----------a-g---g-cccc-----a---g-a-a-ca--aaa-tc
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122267 26 +    313613 aactgac----------a-g---g-tccc-----a---gac-a-ca--aaa-ta
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1386 25 +     11297 aattcat----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31779 25 +     58920 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18277 25 -     45317 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25935 25 -     42441 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28611 25 -     29113 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31688 25 -     48123 aattcat----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52707  9 +     77746 tgatcat----------t-g----------------------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                I 16 I 15
s Solenodon_paradoxus.SolPar_flattened_line_126            1867053  7 -   1910179 aattcac-----------------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 6
s Sorex_araneus.JH798187.1                                 4674308 14 +  18376816 aac--ac----------a-g---g-ctca-----g---g---------------
i Sorex_araneus.JH798187.1                               C 0 I 8
s Spermophilus_dauricus.KZ294078.1                         1871871 33 +   3870691 atttcac----------a-a---a-a-attaagtttaactc-a-ca--aaa-tc
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16002 27 -     97271 aatccac----------a-g---ggcttc-----a---gac-a-ca--gaa-ta
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 19
s Suricata_suricatta.SurSur_flattened_line_6629             128628 27 +    196729 aattcac----------a-g---ggcttc-----a---gat-g-ga--gaa-ta
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 20
s Sus_scrofa.CM000828.4                                    6647888 26 +  69701581 aattcac----------a-g---g-cccc-----a---gaa-a-ca--gaa-ta
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393788 25 +   1523678 aattcac----------a-g---g-ctcc-----a---g-c-a-ca--aaa-tg
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17350  9 +     22964 aattcac----------a-g----------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 26
s Tapirus_indicus.TapInd_scaffold_7432                      194729 26 +    199430 aattcac----------a-t---g-cccc-----a---gat-a-ga--gaa-ta
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108709 26 -    539355 aattcac----------a-t---g-cccc-----a---gat-a-ga--gaa-ta
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4338 26 +      9917 aattcac----------a-g---g-cccc-----a---gtc-a-ta--aaa-tc
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11134 26 +     20590 aattcac----------a-g---g-cccc-----a---gtc-a-ta--aaa-tc
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355940 25 - 186847797 aattCAC----------A-G---G-CCCC-----A---G-C-A-CA--AAA-TC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27577 25 -     33621 aattcac----------a-g---g-c-tc-----c---agg-t-ca--aaa-tc
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483652 13 -    610378 aattcac----------a-g---g-c-ac-------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 18
s Trachypithecus_auratus.k141_1189070                        23687 25 +     26378 aattcac----------a-g---g-cccc-----g---g-c-a-ca--aaa-tc
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36486 25 -     78344 aattcac----------a-g---g-cctc-----a---g-c-a-ca--aaa-tc
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23012 25 +     25722 aattcac----------a-g---g-cccc-----g---g-c-a-ca--aaa-tc
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31442 25 -     62838 aattcac----------a-g---g-cctc-----a---g-c-a-ca--aaa-tc
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31433 25 +     46913 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12170 25 -     28527 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33373 25 -     64340 aattcac----------a-g---g-cctc-----a---g-c-a-ca--aaa-tc
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31411 25 -     63452 aattcac----------a-g---g-cctc-----a---g-c-a-ca--aaa-tc
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12862 25 +     22490 aattcac----------a-g---g-cctc-----a---g-c-a-ca--aaa-tc
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          828 25 +      9911 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          623 25 -     33539 aattcac----------a-g---g-cctc-----a---g-c-a-ca--aaa-tc
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258382 25 -   6242583 aattcac----------a-g---g-cctc-----a---g-c-a-ca--aaa-tc
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4401 25 +     19340 aattcac----------a-g---g-cccc-----a---g-c-a-ca--aaa-tc
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177516 25 -    200418 aattcac----------g-g---g-cccc-----a---gat-a-ca--tag-t-
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839286 26 -   4065304 aaatcac----------a-a---g-ccct-----a---gtc-a-ca--aaa-ta
i Tupaia_chinensis.KB320699.1                            C 0 I 16
s Tupaia_tana.TupTan_flattened_line_394                      13380 26 -     70247 aaatcac----------a-a---g-ccct-----a---atc-a-ca--aaa-ta
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 16
s Tursiops_truncatus.MRVK01000835.1                       17368881 26 -  33153633 aattcac----------a-g---g-cccc-----a---gat-a-ca--gaa-ta
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7114 27 -     21056 aattgat----------a-g---a-cccc-----a---aaagg-ca--aaa-ta
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185205 27 +   5085361 aattcac----------a-g---ggcttc-----a---gac-a-ca--gaa-ta
i Ursus_maritimus.KK499267.1                             C 0 I 19
s Vicugna_pacos.KN270157.1                                   79413 26 +   5488506 aattcac----------a-g---a-cccc-----a---gat-a-ca--gac-ta
i Vicugna_pacos.KN270157.1                               C 0 I 17
s Vulpes_lagopus.VulLag_flattened_line_12041                108559 27 -    112863 aattcac----------a-g---ggcttc-----a---gac-a-aa--gaa-aa
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 25
s Xerus_inauris.XerIna_scaffold_2302                        177752 28 -    224448 atttcag----------a-a---a-a-at-----ttaactc-a-aa--aaa-tc
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32205 27 -     86975 aattcac----------a-g---ggcttc-----a---gac-a-ca--gaa-ta
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 21
s Zapus_hudsonius.ZapHud_scaffold_11398                       4505  9 -     63895 TGACCTT----------C-A----------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 418 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639             842 26 +      3447 aattcac----------a-g---g-ccac-----a---gat-a-ca--gaa-ta
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_510450               1901 278 -      4087 I
e Microgale_talazaci.MicTal_scaffold_6613                    49396 73 +    145209 I
e Echinops_telfairi.JH980293.1                            62858214 80 - 111700974 I
e Orycteropus_afer.OryAfe_flattened_line_201229               2589 223 +     11607 I
e Elephantulus_edwardii.JH947257.1                         9113279 68 -  10337057 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            609346 87 -    839153 I
e Choloepus_didactylus.ChoDid_scaffold_147047                 1866 90 +     10270 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   22296 79 -     31044 I
e Dasypus_novemcinctus.JH564415.1                          2112554 81 -   2246927 I
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            15196 81 -     19938 I
e Trichechus_manatus.JH594705.1                            6485301 82 -  10818551 I
e Procavia_capensis.ProCapCap_scaffold_128773                 2495 82 -     12774 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Loxodonta_africana.GL010049.1                           39087697 84 +  43346337 I
e Heterohyrax_brucei.HetBruBak_scaffold_116546                5963 82 +      8654 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9768 71 +     36723 TAAGA----------TGGGATA--GG-AA-A-AGCT---T------T----------T-TT----C----CTACCC-AACAGA-ATGCTGAAAATGT-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
s Acinonyx_jubatus.LLWD01001279.1                           816291 49 +   1699592 ----------------------------------------------t---t------t--tt---c----ctgctc-tacaG-AATGCTTAGGATGA-------AAACAC------------TTC-C-T--T----CTG----------------------GTT
i Acinonyx_jubatus.LLWD01001279.1                        I 20 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418794 49 +  29979442 ----------------------------------------------t---t------t--tt---c----cTGCTG-TACCT-AATGCTTAGGATGA-------ACATAT------------TTC-C-C--T----CTG----------------------GTT
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 19 C 0
s Ailurus_fulgens.LNAC01001112.1                            218797 46 +    347723 ------------------------------------------------------------tt---c----ctgctc-tgcCG-AATGCTTAGAATCA-------AAATAT------------TTC-C-C--T----CTG----------------------GTT
i Ailurus_fulgens.LNAC01001112.1                         I 21 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50714 70 +     53615 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2741 70 +     13857 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19296 70 -     21945 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         20981 70 +     32033 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74245 68 -     84148 tacga----------tgggata--gg-aa-g-aac----t------t----------t-ttt---c----ctaccc-aac----aTGCTGAAGATGA-------AAATAG------------TTTTT-C--T----TTG----------------------GTC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46487 71 -     78289 tacga----------tgggata--gg-aa-g-aac----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATAG------------TTTTT-C--T----TTG----------------------GTC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45913 70 +     55831 tacga----------tgggata--gg-aa-g-aac----t------t----------t-ttt---c----ctaccc-aacaG--ATGCAGAAGATGA-------AAATAG------------TTTTT-C--T----TTG----------------------GTC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44375 70 -     64179 tacga----------tgggata--gg-aa-g-aac----t------t----------t-ttt---c----ctaccc-aacaG--ATGCTGAAGATGA-------AAATAG------------TTTTT-C--T----TTG----------------------GTC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1482 71 -      3959 tacaa----------tgggata--gg-aa-g-aac----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATAG------------TTTTT-C--T----TTG----------------------GTC
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43000 70 +     45454 tacga----------tgggata--gg-aa-g-aac----t------t----------t-ttt---c----ctaccc-aacaG--ATGCTGAAGATGA-------AAATAG------------TTTTT-C--T----TTG----------------------GTC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48648 71 +     70886 tacga----------tgggata--gg-aa-g-aac----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATAG------------TTTTT-C--T----TTG----------------------GTC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10819 70 +     30854 tacaa----------tgggata--gg-aa-g-aac----t------t----------t-ttt---c----ctaccc-aacaG--ATGCTGAAGATGA-------AAATAG------------TTTTT-C--T----TTG----------------------GTC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             34955 70 +     42133 tacga----------tgggata--gg-aa-g-aac----t------t----------t-ttt---c----ctaccc-aacaG--ATGCTGAAGATGA-------AAATAG------------TTTTT-C--T----TTG----------------------GTC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1591996 44 +   2318259 -----------------------------------------------------------------c----ttacct-CACAA-AATGCTGAAGATAA-------GAATAT------------TCC-T-A--T----TTA----------------------GTT
i Ammotragus_lervia.NIVO01071767.1                       I 26 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180379 68 -    412891 gaaga----------atgtaga---g-aa-a-a----att------t----------t--t---ac----ctaccc-tacaG-AATGCTGAGGGTGA-------AAATAT------------TTC-T-G--T----TTG----------------------ATT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53152 44 -     68529 -----------------------------------------------------------------c----ctacct-tgcaA-AATGCTGAGAATGA-------AAATAT------------TCC-C-A--T----TTG----------------------GTT
i Antilocapra_americana.AntAmePen_scaffold_21030         I 24 C 0
s Aotus_azarae.k141_887050                                    3196 21 +     17741 tacga----------tgggata--gg-aa-g-agc----t----------------------------------------------------------------------------------------------------------------------------
i Aotus_azarae.k141_887050                               C 0 I 13
s Aotus_griseimembra.k141_3192254                             3821 21 -     15923 tacga----------tgggata--gg-aa-g-agc----t----------------------------------------------------------------------------------------------------------------------------
i Aotus_griseimembra.k141_3192254                        C 0 I 13
s Aotus_nancymaae.KZ198451.1                                674103 21 +   5030052 TACGA----------TGGGATA--GG-AA-G-AGC----T----------------------------------------------------------------------------------------------------------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 I 13
s Aotus_trivirgatus.k141_318729                               4097 21 -     16391 tacga----------tgggata--gg-aa-g-agc----t----------------------------------------------------------------------------------------------------------------------------
i Aotus_trivirgatus.k141_318729                          C 0 I 13
s Aotus_vociferans.k141_1514463                               3656 21 -     17186 tacga----------tgggata--gg-aa-g-agc----t----------------------------------------------------------------------------------------------------------------------------
i Aotus_vociferans.k141_1514463                          C 0 I 13
s Aplodontia_rufa.AprRuf_scaffold_46868                      27232 69 -     32367 AGGGA----------TGTTAGA--GG-CA-A-A---GT-A------T----------T--A---TT----CTACCC-TACAG-AATACTGCTGATAA-------AAACAT------------TTG-T-C--T----TTG----------------------ACA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  8893 68 -     15198 gaaga----------aagtaga---g-aa-a-c---gt-t------t----------t--t---cc----ctaccc-tgcaG-AATGCTGAGGGTGA-------AAATAT------------TTC-T-G--T----TCG----------------------ACC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276715 71 +  21539123 tacga----------tgggata--gg-aa-a-aac----t------t----------t-tct---c----ctacaC-AACAGA-ATGCTGAAGTTGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12881 71 +     48076 tacga----------tgggata--gg-aa-g-aac----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGTTGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8019 71 -     28759 tacaa----------tgggata--gg-aa-g-aac----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGTTGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35572 71 +     44353 tacga----------tgggata--gg-aa-a-aac----t------t----------t-tct---c----ctacaC-AACAGA-ATGCTGAAGTTGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              50943 71 -     71267 tacga----------tgggata--gg-aa-g-aac----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGTTGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                24999 71 -     33135 tacga----------tgggata--gg-aa-g-aac----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGTTGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966630 71 -  23207421 gaaga----------aggtaga--ga-aaaa-a---gt-t------t---t------t--tt---c----ctacca-tacaT-AATGCTGaggatga-------aaatat------------ttc-t-a--t----ttg----------------------gtt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3131 71 -     25979 gaaga----------aggtaga--ga-aaaa-a---gt-t------t---t------t--tt---c----ctacca-tacaT-AATGCTGaggatga-------aaatat------------ttc-t-a--t----ttg----------------------gtt
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     92985 44 +    124022 -----------------------------------------------------------------c----ttacct-cacaA-AATGCTGAGGATGA-------AAATAT------------TCC-C-A--T----TTG----------------------GTT
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 26 C 0
s Bison_bison.KN261452.1                                     36185 44 +    288883 -----------------------------------------------------------------c----ctacct-cacaA-AATGCTGAGGATGA-------AAATAT------------TCC-C-A--T----TTG----------------------GTT
i Bison_bison.KN261452.1                                 I 27 C 0
s Bos_indicus.CM003047.1                                  28423325 44 -  48749331 -----------------------------------------------------------------c----ctacct-caCAA-AATGCTGAGGATGA-------AAATAT------------TCC-C-A--T----TTG----------------------GTT
i Bos_indicus.CM003047.1                                 I 27 C 0
s Bos_mutus.JH880303.1                                      768926 44 +   1948126 -----------------------------------------------------------------c----ctacct-caCAA-AATGCTGAGGATGA-------AAATAT------------TCC-C-A--T----TTG----------------------GTT
i Bos_mutus.JH880303.1                                   I 27 C 0
s Bos_taurus.CM000203.6                                   27559471 44 -  45695690 -----------------------------------------------------------------c----ctacct-caCAA-AATGCTGAGGATGA-------AAATAT------------TCC-C-A--T----TTG----------------------GTT
i Bos_taurus.CM000203.6                                  I 27 C 0
s Bubalus_bubalis.KI419123.1                               1536152 44 -   4408762 -----------------------------------------------------------------c----ctacct-cacaA-AATGCTGAGGATGA-------AAATAT------------TCC-C-A--T----TTG----------------------GTT
i Bubalus_bubalis.KI419123.1                             I 27 C 0
s Cacajao_ayresi.k141_96119                                   9806 71 +     28062 tacga----------tgagata--gg-aa-g-atc----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGG-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45097 71 -     91139 tacga----------tgagata--gg-aa-g-atc----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGG-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22624 71 +     95584 tacga----------tgagata--gg-aa-g-atc----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGG-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22537 71 +    119600 tacga----------tgagata--gg-aa-g-atc----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGG-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                            7634064 49 +  17673402 ----------------------------------------------t---t------t--tt---c----ctgccc-tacaA-AATGCTGAGGATGA-------AAATAC------------TTC-T-A--T----TTG----------------------GTT
i Camelus_bactrianus.KN276810.1                          I 17 C 0
s Camelus_dromedarius.KN272107.1                           4668365 49 +   7040546 ----------------------------------------------t---t------t--tt---c----ctgccc-tacaA-AATGCTGAGGATGA-------AAATAC------------TTC-T-A--T----TTG----------------------GTT
i Camelus_dromedarius.KN272107.1                         I 17 C 0
s Camelus_ferus.KB017975.1                                 1212053 49 +   1652518 ----------------------------------------------t---t------t--tt---c----ctgccc-tacaA-AATGCTGAGGATGA-------AAATAC------------TTC-T-A--T----TTG----------------------GTT
i Camelus_ferus.KB017975.1                               I 17 C 0
s CanFam4.chr16                                           42508745 43 +  60362399 ----------------------------------------------------------------------ctgctc-tacaG-AATGCTTAGGATGA-------AAATAT------------TTC-T-C--T----CTG----------------------ATT
i CanFam4.chr16                                          I 25 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12380 43 -     23171 ----------------------------------------------------------------------ctgctc-tacaG-AATGCTTAGGATGA-------AAATAT------------TTC-T-C--T----CTG----------------------ATT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 25 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225721 43 +   9314153 ----------------------------------------------------------------------ctgctc-tacaG-AATGCTTAGgatga-------aaatat------------ttc-t-c--t----ctg----------------------aTT
i Canis_lupus_dingo.QKWQ01000480.1                       I 25 C 0
s Canis_lupus_familiaris.chr16                            41618858 43 +  59632846 ----------------------------------------------------------------------ctgctc-tacaG-AATGCTTAGgatga-------aaatat------------ttc-t-c--t----ctg----------------------aTT
i Canis_lupus_familiaris.chr16                           I 25 C 0
s Canis_lupus_orion.HG994398.1                            45110439 43 -  63665305 ----------------------------------------------------------------------ctgctc-tacaG-AATGCTTAGgatga-------aaatat------------ttc-t-c--t----ctg----------------------ATT
i Canis_lupus_orion.HG994398.1                           I 25 C 0
s Capra_aegagrus.CM003241.1                               27416000 44 -  46296322 -----------------------------------------------------------------c----ttacct-CACAA-AATGCTGAGGATAA-------AAATAT------------TCC-T-A--T----TTA----------------------GTT
i Capra_aegagrus.CM003241.1                              I 26 C 0
s Capra_hircus.CM004588.1                                 26597997 44 +  44709034 -----------------------------------------------------------------c----ttacct-CACAA-AATGCTGAGGATAA-------AAATAT------------TCC-T-A--T----TTA----------------------GTT
i Capra_hircus.CM004588.1                                I 26 C 0
s Callibella_humilis.k141_1233062                            12184 21 +     18648 tacga----------tgggata--gg-aa-g-aac----t----------------------------------------------------------------------------------------------------------------------------
i Callibella_humilis.k141_1233062                        C 0 I 13
s Callimico_goeldii.k141_1609886                             11692 21 -     13885 tacga----------tgggata--gg-aa-g-aac----t----------------------------------------------------------------------------------------------------------------------------
i Callimico_goeldii.k141_1609886                         C 0 I 13
s Callithrix_geoffroyi.k119_459277                            3791 21 -      8861 tacga----------cgggata--gg-aa-g-aac----t----------------------------------------------------------------------------------------------------------------------------
i Callithrix_geoffroyi.k119_459277                       C 0 I 13
s Callithrix_jacchus.pat_scaffold_3                      165456183 21 + 189096842 TACGA----------TGGGATA--GG-AA-G-AAC----T----------------------------------------------------------------------------------------------------------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 13
s Callithrix_kuhlii.k119_102356                               3705 21 +      8664 tacga----------cgggata--gg-aa-g-aac----t----------------------------------------------------------------------------------------------------------------------------
i Callithrix_kuhlii.k119_102356                          C 0 I 13
s Capromys_pilorides.CapPil_scaffold_26391                    1899 60 -     20114 caa-a----------t----ag--gg-ag-a-a---gt-t-gt---c----------c--tt---G----CTACCG-TATTG-GAA------GCTGA-------AAGTAT------------TT----TTCT----TTG----------------------ATT
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274173 71 +    496798 TAAGC----------TGGAATA--GG-AA-A-AGC--C-T------T----------T-TT---TC----CTACCA-TGCAGA-ATGCTGAGAATGA-------aagtat------------ttc-t-c--t----ttt----------------------gtt
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               3767 68 +      9923 gaaga----------aagtaga---g-aa-a-a---gt-t------t----------c--tt---a----ctaccc-tacaG-AAAGCTGAGGGTGA-------CAGTAT------------TTC-T-G--T----TTG----------------------ATT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31466 70 -     39886 taaaa----------tggtaga--ga-aa-a-a---gt-t------t----------tc-tt---g----ctacct-tacCT-AATACTTAAGATGA-------AAATAT------------TTC-T-C--T----TTG----------------------GCT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     82968 73 -    217609 tagga----------ggacaga--gg-aa-a-a---gt-t------t---t------t--ttttcc----ttaACC-TACGA-AATGCAGAGGATAA-------AAATAT------------TTT-T-A--T----TTG----------------------GTT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4999932  6 +  23392119 ----------------------------------------------------------------------------------------------------------------------------------------TTT----------------------ATT
i Cavia_aperea.AVPZ01000300.1                            I 57 C 0
s Cavia_porcellus.DS562891.1                               5003316 56 +  23407841 taaaa----------tggtgag--gg-ag-a-a----att-at---c----------t--tt---g----ctaccc-taTTG-gat------gctga-------aaatat------------tt----t-----------------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 7
s Cavia_tschudii.CavTsc_scaffold_8919                          213 47 -    143979 -------------------GAG--GG-AG-A-A---AT-T----ATC----------T--T---TG----CTACCC-TATTG-GAT------GCTGA-------AAATAT------------TT----T-----------------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    N 0 I 7
s Cebuella_niveiventris.k141_592277                           7104 21 -     12580 tacga----------tgggata--gg-aa-g-aac----t----------------------------------------------------------------------------------------------------------------------------
i Cebuella_niveiventris.k141_592277                      C 0 I 13
s Cebuella_pygmaea.k141_145798                               45160 21 +     53515 tacga----------tgggata--gg-aa-g-aac----t----------------------------------------------------------------------------------------------------------------------------
i Cebuella_pygmaea.k141_145798                           C 0 I 13
s Cebus_albifrons.Contig27                                  375893 21 -  26074798 tatga----------tgggata--aa-aa-t-aac----t----------------------------------------------------------------------------------------------------------------------------
i Cebus_albifrons.Contig27                               C 0 I 13
s Cebus_olivaceus.k141_1404781                                9964 21 -     34880 tatga----------tgggata--aa-aa-t-aac----t----------------------------------------------------------------------------------------------------------------------------
i Cebus_olivaceus.k141_1404781                           C 0 I 13
s Cebus_unicolor.k141_1654760                                69060 21 -     89041 tatga----------tgggata--aa-aa-t-aac----t----------------------------------------------------------------------------------------------------------------------------
i Cebus_unicolor.k141_1654760                            C 0 I 13
s Cephalopachus_bancanus.k141_1140705                         1836 71 -     76265 taagc----------tggaata--gg-aa-a-agc-c--t------t----------t-ttt---c----ctacca-tgcaGA-ATGCTGAGAATGA-------AAGTAT------------TTC-T-C--T----TTT----------------------GTT
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495298 70 -  27778364 taaga----------ggatgga--gg-aa-a-a---gt-t------t---t------t--tt---g----ctactc-tacaG-AATTTGGaggatga-------aaatat------------ttc-t-c--t----ttg----------------------gtt
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22131 70 +     27315 taaga----------ggatgga--gg-aa-a-a---gt-t------t---t------t--tt---g----ctactc-tacaG-AATTTGGAGGATGA-------AAATAT------------TTC-T-C--T----TTG----------------------GTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143797 70 -   4669795 TAAGC----------TGGGATA--AG-AA-A-AGT----T------T----------A-TT----C----CTACCC-AACAGa-atgctgaaaatga-------aaatat------------ttttt-c--t----ttg----------------------gtt
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47536 70 +     47900 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           2969 70 -     14410 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47351 70 -    148725 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29629 70 -     40656 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9588 70 +     20796 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14701 70 -     17524 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30434 70 -     34525 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14212 70 -     25376 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366801 70 -  39242232 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272526 70 +  21565898 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34893 70 -     45857 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29794 70 -     32606 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         5955 69 +      8499 taaga----------tgggata--a--aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGTTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28354 70 +     70610 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAG------------TTTTT-C--T----TTG----------------------GTT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25316 70 +     36323 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15277 31 -     19938 ------------------------------------------------------------------------------------ATGCTGAGGATTA-------AACCAT------------TTC-T-C--T----ATG----------------------GTT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 81 C 0
s Cheracebus_lucifer.k141_2312002                            10892 71 -     32913 tacga----------tgggata--gg-aa-g-atc----t------c----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21305 71 -     40346 tacga----------tgggata--gg-aa-g-atc----t------c----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATAC------------CTTTT-C--T----TTG----------------------GTT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21559 71 +    216457 tacga----------tgggata--gg-aa-g-atc----t------c----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21349 71 +     39636 tacga----------tgggata--gg-aa-g-atc----t------c----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33335 34 -     52013 tacga----------tgggata--gg-aa-gaatt----t------t----------t-TT---CT----TTGGTT----------------------------------------------------------------------------------------
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44438 71 -    112038 tacga----------tgggata--gg-aa-g-atc----t------t----------t-ctt---c----cTACCC-AACAGA-ATGCTGAAGATGA-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                           9988 71 +     34062 tacga----------tgggata--gg-aa-g-atc----t------t----------t-ctt---c----cTACCC-AACAGA-ATGCTGAAGATGA-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346216 70 +  18827391 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12755 70 -     44032 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307602 70 - 135778131 TAAGA----------TGGGATA--AG-AA-A-AGT----T------T----------A-TT----C----CTACCC-AACAGa-atgctgaaaatga-------aaatat------------ttttt-c--t----ttg----------------------gtt
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 1956 31 +     10270 ------------------------------------------------------------------------------------ATGCTGAAGATAA-------AACTAT------------TTC-T-C--T----ATG----------------------GAT
i Choloepus_didactylus.ChoDid_scaffold_147047            I 90 C 0
s Choloepus_hoffmanni.KN194906.1                            609433 31 -    839153 ------------------------------------------------------------------------------------ATGCTGAAGATAA-------AACTAT------------TTC-T-C--T----ATG----------------------GAT
i Choloepus_hoffmanni.KN194906.1                         I 87 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2179 31 -      4087 ------------------------------------------------------------------------------------CTGCTGGGCATGA-------AAAGAT------------TTC-T-T--T----TTG----------------------GTT
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          I 278 C 0
s Colobus_angolensis.KN981557.1                             412010 70 -   2368649 TAAGA----------TGGGATA--GG-AA-A-AGT----T------T----------T-TT----C----CTACCC-AACAGa-atgctgaaaatga-------aaatat------------ttttt-c--t----ttg----------------------gtt
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381892 70 - 200372422 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5444 70 -     84244 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GCT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810487 71 +  53390261 tt-ga----------aagcaga--gc-aa-a-a----att------t---------ac--tt---c----ctaccc-tacaG-ATTGctgaaaatga-------caatat------------ttc-t-t--tCAGTGTA------------------------T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6050 64 -      8242 taaga----------gagtaga--ga-aa-a-a---gc-t------t----------t--tt---c----c---tt-tacaG-AAAGCTGAAGATGG-------AAATAG------------T---T-G--T----TTG----------------------ATT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12309 28 +     12657 TGAGA----------GTATGCA--AG-AA-T-A----C-T------T---------AT--C---TC----CA--------------------------------------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 30
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7675 49 +     87169 ----------------------------------------------t---t------t--tt---c----ctgctc-tacaG-AATGCTTAGGATGA-------AAATAT------------TTG-C-C--T----CTG----------------------GTT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 20 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    649929 69 -   1526836 taaga----------tggtcag--ga-ag-a-a---gt-g------t----------t--tt---g----ctattt-tacaG-GAGGCTGAGGATGA-------AAATCT------------TCC-C-C--T----TTG----------------------ATT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22573 61 +     50838 CAAGA----------T----AG--GG-AG-A-C---AT-T----GTC----------T--T---TG----CTACCG-CATTG-GAG------GCTGA-------AAATAT------------TT----TTCT----TTG----------------------ATT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12061 65 +     36344 taaga----------tggtcag--gg-ag-a-a---gt-t-gt---c----------t--tt---g----ctaccc-taTTG-GAG------GCTGC-------AAATAT------------TT----TTCT----TTG----------------------ATT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31502 65 +     75252 taaga----------tggtcag--gg-ag-a-a----att-gt---c----------t--tt---g----ctaccc-tacTG-GAG------GCTGA-------AAATAT------------TT----TTCT----TTG----------------------ATT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2112635 31 -   2246927 ------------------------------------------------------------------------------------ATGCTGAGGATTA-------AGCTAT------------TTC-T-C--T----ATG----------------------GCT
i Dasypus_novemcinctus.JH564415.1                        I 81 C 0
s Delphinapterus_leucas.KZ290073.1                        18635034 71 -  35494412 gaaga----------aggtaga--ga-aaaa-a---gt-t------a---t------t--tt---c----ttacca-tacaT-AATGCTGaggatga-------aaatat------------ttc-t-a--t----ttg----------------------gtT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11868759 68 -  20541912 gaaga----------aagtaga---g-ag-c-a---gt-t------t----------t--tt---c----ctaccc-tacaG-AGTGCTGAGGGTGA-------AAATAG------------TCC-C-G--T----TTG----------------------ATT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667569 70 -   1390856 taaga----------ggataaa--gg-aa-a-a---ga-c------t---t------t--tt---c----ctactc-tacaG-AATTCAGAGgatga-------aaatat------------ttc-t-c--t----ttg----------------------gtt
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142371 70 -    198055 taaga----------ggataga--gg-aa-a-a---gt-t------t---t------t--tt---c----ctgctc-tacaG-AATTCGGAGGATGA-------AAATAT------------TTC-T-C--T----TTG----------------------GTT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955112 88 -  37912305 aaaga----------tgaaaga--gg-ac-a-a---gc-t------t----------tc-tt---a----ctatcc-tacCT-AATGTGAAGAATAAGT-GGAGAAACATTTCAATCCAAAATTC-T-C--T----TTG----------------------GTT
i Dipodomys_ordii.KN672350.1                             I 10 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                    750 62 +     14058 -----------------------------------------------------------------A----CTATCC-TACCT-AATGTGAAGAATGAGT-GGAGAAACATTTCAATCCAAAATTC-T-C--T----TTG----------------------GTT
i Dipodomys_stephensi.DipSte_scaffold_77284              N 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 12634 65 +     14636 taaga----------tggtgag--gg-ag-a-a---gt-t-at---c----------t--tt---g----ctaccc-taTTG-GAG------GCTGA-------AAATAT------------AT----ATTT----TTT----------------------ATT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62858294 31 - 111700974 ------------------------------------------------------------------------------------ATGCTAAGGATCA-------AAAGGT------------TTC-C-C--A----GTG----------------------GTT
i Echinops_telfairi.JH980293.1                           I 80 C 0
s Eidolon_helvum.AWHC01266696.1                               9406 70 +     19438 taata----------gggtaga--ag-aa-a-a---gt-t------t---t------t--tt---c----ccaccc-tacaG-AATGCTGaggatga-------aaatat------------ttc-t-g--t----ttt----------------------att
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       245759 71 -    607251 gaaga----------aggtaga--ga-gc-a-a---gt-t------t---tt-----t--tt---c----ctccct-cacaA-AATGCTGAGAATGA-------AAATAT------------TCC-C-A--T----TTG----------------------GTT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9113347 31 -  10337057 ------------------------------------------------------------------------------------ATGTTGAGGAGGA-------ATATAT------------TTC-T-C--T----TTG----------------------GTT
i Elephantulus_edwardii.JH947257.1                       I 68 C 0
s Enhydra_lutris.KZ291758.1                               24925330 45 +  41312741 ------------------------------------------------------------tt---c----ttgttc-tt-ct-agtgcttagaatga-------aaatat------------ttc-c-c--t----CTG----------------------GTT
i Enhydra_lutris.KZ291758.1                              I 61 C 0
s Eptesicus_fuscus.JH977646.1                             12582555 41 +  14770903 ----------------------------------------------------------------------ctactg-tacaA-AATGCTGAaggtaa-------aaatat------------ttc-t-g--t----tt-----------------------at-
i Eptesicus_fuscus.JH977646.1                            I 27 C 0
s Equus_asinus.JREZ01000139.1                              3045037 68 -   4378816 taaga----------gggtaga--gg-aa-a-a---gt-t------t---t------t--tt---c----ctaccc-tacaG-AATGCTGAGGATGg-------aaa--t------------ttc-t-c--t----ttg----------------------gtt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21378967 68 +  39960074 taaga----------gggtaga--gg-aa-a-a---gt-t------t---t------t--tt---c----ctaccc-tacaG-AATGCTGAGGATGg-------aaa--t------------ttc-t-c--t----ttg----------------------gtt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              414949 68 -    498745 taaga----------gggtaga--gg-aa-a-a---gt-t------t---t------t--tt---c----ctaccc-tacaG-AATGCTGAGGATGg-------aaa--t------------ttc-t-c--t----ttg----------------------gtt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671262 59 +   7059049 tgag--------------tagt--ga-aa-a-a---gt-t------t---------at--tt---c----ctactc-tacaG-AATGCTAAAGGTGA-------AAATAT------------TTC-T-T-----------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 5
s Erythrocebus_patas.Contig38                               265744 70 +  21539334 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74244 71 -    133382 gaaga----------aggtaga--ga-aaaa-a---gg-t------t---t------t--tt---c----ctacca-tacaT-AATGCTGAGGATGA-------AAATAT------------TTC-T-A--T----TTG----------------------GTT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              1959 71 +     25849 gaaga----------aggtaga--ga-aaaa-a---gt-t------t---t------t--tt---c----cTACCA-TGCAT-AATGTTGAGCATGA-------AAATAT------------TTC-T-A--T----TTG----------------------GTT
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250293 49 - 206538554 ----------------------------------------------t---t------t--tt---c----ctgctc-tacaG-AATGCTTAGGATGA-------AAACAC------------TTC-C-T--T----CTG----------------------GTT
i Felis_catus.CM001381.2                                 I 20 C 0
s Felis_catus_fca126.CM031415.1                          185120249 49 - 205367284 ----------------------------------------------t---t------t--tt---c----ctgctc-tacaG-AATGCTTAGGATGA-------AAACAC------------TTC-C-T--T----CTG----------------------GTT
i Felis_catus_fca126.CM031415.1                          I 20 C 0
s Felis_nigripes.FelNig_flattened_line_44075                   891 49 +     25330 ----------------------------------------------t---t------t--tt---c----ctgctc-tacaG-AATGCTTAGGATGA-------AAACAC------------TTC-C-T--T----CTG----------------------GTT
i Felis_nigripes.FelNig_flattened_line_44075             I 20 C 0
s Fukomys_damarensis.KN121974.1                            2925869 61 -   3816255 taaaa----------tggtcag--gg-ag-a-a---gt-t-gt---t----------t--tt---G----CTAC-----TTg-gag------actga-------aaatat------------tt----ttct----ttg----------------------att
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                4831 71 -     28519 taaga----------tgggaga--tg-aa-a-g---gt-t------t----------tcttt---c----ctatcc-tacaG-AATACTGAGGATGA-------AAATAT------------TTC-T-G--T----TTG----------------------GTT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2044 44 +    660261 -----------------------------------------------------------------c----ctacct-tgcaA-AATGCTGAGGATGA-------AAATAT------------TCC-C-G--T----TTG----------------------GTT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 26 C 0
s Glis_glis.GliGli_scaffold_163929                            4856 68 -      6791 taaga----------tggtaga--gg-aa-a-a---gc-t------t----------t--t---TA----CTACT--TGCAG-GATGCTCAGGATGA-------AAATAT------------TTC-T-C--T----TTG----------------------ATT
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                519 71 -      2763 taaga----------tgggata--gg-aa-a-agct---t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGT-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Gorilla_beringei.k141_3218903                          I 25 I 17
s Gorilla_gorilla.LT578341.1                                258939 71 - 186649187 taaga----------tgggata--gg-aa-a-agct---t------t----------t-tt----c----ctaccc-aacaGA-ATgctgaaaatgt-------aaatat------------ttttt-c--t----ttg----------------------gtt
i Gorilla_gorilla.LT578341.1                             I 25 I 17
s Graphiurus_murinus.GraMur_scaffold_10447                    6771 68 -     78134 taaga----------tggtaga--gg-aa-a-a---gc-t------t----------t--t---TA----CTACT--TGTGG-GATGCTGAGGATGA-------AAATGT------------TTC-T-C--T----TTG----------------------ATT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34077 49 -    327341 ----------------------------------------------t---t------t--tt---c----ctgctc-tacaG-AATGCTTAGGATGA-------AAATAT------------TTG-C-C--T----CTG----------------------GTT
i Helogale_parvula.HelPar_flattened_line_2585            I 20 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15711 44 +     48891 -----------------------------------------------------------------c----ttacct-cacaA-AATGCTGAGGATGA-------AAATAT------------TCC-T-G--T----TTG----------------------GTT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 26 C 0
s Heterocephalus_glaber.JH602082.1                         1938308 61 -  22651954 taaaa----------tggtcag--gg-ag-a-a---gt-t-gt---t----------T--G---Tg----ctac-----ttg-gag------gctga-------gaatat------------tt----ttct----ttg----------------------gtt
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6045 29 +      8654 ------------------------------------------------------------------------------------ATGCTGAGAATGA-------AAATAT------------TT----C--T----TTG----------------------GCT
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 82 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11072 70 -     36432 gaagg----------aggcaga--ga-aa-a-a---gt-t------t---t------t--tt---c----ctcccc-tacaT-AATGCTGAGGATGA-------AAATAT------------TTT-T-A--T----TTG----------------------GTT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556143 47 -   1711038 ---------------------------------------------------------t--tt---t----ctatcc-tacaG-AATGCTGAAGATGG-------AAATAT------------TTC-T-G--T----TTG----------------------ATT
i Hipposideros_armiger.JXIK01000431.1                    I 21 C 0
s Hipposideros_galeritus.HipGal_scaffold_379987                452 47 -       792 ---------------------------------------------------------t--tt---t----ctatcc-tacaG-AATGCTGAAGATGG-------AAATAC------------TTC-T-G--T----TTG----------------------ATT
i Hipposideros_galeritus.HipGal_scaffold_379987          n 68 n 68
s Hoolock_leuconedys.ctg274                                    145408 70 -    630532 taaga----------tgggata--gg-aa-a-agct---t------t----------t-tt----c----cta-cc-AACAGA-ATGCTGAAAATGT-------AAATAT------------TTTTT-A--T----TTG----------------------GTT
i Hoolock_leuconedys.ctg274                                 C 0 I 5
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73712 49 +     83186 ----------------------------------------------t---t------a--tt---c----ctgctc-tacaG-AATGCTTAGGATGA-------AAATAG------------TTG-C-C--T----GTG----------------------GTT
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 20 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75249 65 +    143317 taaga----------tagtgag--gg-ag-a-a---gt-t-at---c----------t--tt---g----ccaccc-taTTG-GAG------GCTGA-------AAGTAT------------TT----TTTT----TTT----------------------ATT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               8454 71 +     12352 tgaga----------tgggata--gg-aa-a-agat---t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGT-------AAATAT------------TTTTT-A--T----TTG----------------------GTT
i Hylobates_agilis.k141_1155965                          C 0 I 5
s Hylobates_klossii.k141_738755                              15641 71 +     55766 taaga----------tgggata--gg-aa-a-agct---t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGT-------AAATAT------------TTTTT-A--T----TTG----------------------GTT
i Hylobates_klossii.k141_738755                          C 0 I 5
s Hylobates_pileatus_b.LG02                                       2055169 71 + 191637585 taaga----------tgggata--gg-aa-a-agct---t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGT-------AAATAT------------TTTTT-A--T----TTG----------------------GTT
i Hylobates_pileatus_b.LG02                                     C 0 I 5
s Hylobates_pileatus_a.tarseq_633                            7804047 71 +  11177569 taaga----------tgggata--gg-aa-a-agct---t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGT-------AAATAT------------TTTTT-A--T----TTG----------------------GTT
i Hylobates_pileatus_a.tarseq_633                          C 0 I 5
s Hystrix_cristata.HysCri_scaffold_5660                      11085 65 -    135385 taaga----------tggtcag--gg-ag-a-a---gt-t-gt---t----------t--tt---g----ctgccc-taTTT-GAG------GCTGA-------AAATAG------------TTT-T-C--T----TTG----------------------ATT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390334 71 +   7955117 taaga----------tgttaga--gg-aa-a-a---gt-t------tgggtttttttt--tt---a---aataccc-taaa----------gaatga-------aaatat------------ttc-t-t--t----ttg----------------------att
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13138 71 -     16823 gaaga----------aggtaga--ga-aaaa-a---gt-t------a---t------t--tt---c----ttacca-tacaT-AATGCTGAGGATGA-------AAATAT------------TTC-T-A--T----TTG----------------------GTT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 74979 68 -     97402 ga-------------aggtaga--ga-aaaa-a---gt-t------t---t------t--tt---c----ctacca-tacaT-AATGCTGAGGATGA-------AAATAT------------TTC-T-A--T----TTG----------------------GTT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45265 71 +    110728 tacga----------tgggata--gg-ca-g-aac----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGTTGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    35952 69 -     49555 g---a----------aggtaga---g-aa-a-a---gt-t------t----------t--tttt-ttttccTACGG-TACAA-AATGCTGAAGGTAA-------AAATAT------------TTC-T-G--T----TT-----------------------AT-
i Lasiurus_borealis.LasBor_scaffold_26245                I 73 I 108
s Leptonychotes_weddellii.KB714746.1                        816595 49 -   3914936 ----------------------------------------------t---t------t--tt---c----ctgctc-tacCG-AATGCTTAGGATGA-------AAATAT------------TTC-C-C--T----CTG----------------------GTT
i Leptonychotes_weddellii.KB714746.1                     I 19 C 0
s Lepus_americanus.LepAme_scaffold_56121                     21794 44 +     24238 ---------------------------------------------------------t--tt---c----ctatt-ctgcaG-AATGCTG---ATGA-------AAATAT------------TTC-T-G--T----TTG----------------------GTT
i Lepus_americanus.LepAme_scaffold_56121                 I 21 C 0
s Leontocebus_fuscicollis.k141_3470480                         740 21 -     23187 tacga----------tgggata--gg-aa-g-aat----t----------------------------------------------------------------------------------------------------------------------------
i Leontocebus_fuscicollis.k141_3470480                   C 0 I 13
s Leontocebus_illigeri.k141_2759473                           1053 21 -     14280 tacga----------tgggata--gg-aa-g-aat----t----------------------------------------------------------------------------------------------------------------------------
i Leontocebus_illigeri.k141_2759473                      C 0 I 13
s Leontocebus_nigricollis.k141_1320036                         695 21 +      3713 tacga----------tgggata--gg-aa-g-aat----t----------------------------------------------------------------------------------------------------------------------------
i Leontocebus_nigricollis.k141_1320036                   C 0 I 13
s Leontopithecus_chrysomelas.k141_3286424                      885 21 +      8855 tacga----------tgggata--gg-aa-g-aac----t----------------------------------------------------------------------------------------------------------------------------
i Leontopithecus_chrysomelas.k141_3286424                C 0 I 13
s Leontopithecus_rosalia.k141_1583055                         5687 21 -     13645 tacga----------tgggata--gg-ag-g-aac----t----------------------------------------------------------------------------------------------------------------------------
i Leontopithecus_rosalia.k141_1583055                    C 0 I 13
s Lipotes_vexillifer.KE559953.1                             344320 71 +    662738 gaaga----------aagtaga--ga-aaaa-t---gt-t------a---t------t--tt---c----ttacca-tacCT-AATGCTGAGGATGA-------GAATAG------------TTC-T-A--T----TTG----------------------GTT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336679 70 -   1826925 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39087781 31 +  43346337 ------------------------------------------------------------------------------------ATgctgagaatga-------aaatat------------ttc-t-c--t----ttG----------------------GTT
i Loxodonta_africana.GL010049.1                          I 84 I 4
s Lycaon_pictus.CM007581.1                                41618013 43 +  59628241 ----------------------------------------------------------------------NNNNNN-NNNNN-NATGCTTAGgatga-------aaatat------------ttc-t-c--t----ctg----------------------aTT
i Lycaon_pictus.CM007581.1                               I 25 C 0
s Macaca_arctoides.k141_1757516                              48071 70 -     61512 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375733 70 -  60120075 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28001 70 +     30207 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2839 70 -      5035 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 27954 70 +     30527 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39130 70 -     50087 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48875 70 +     51645 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----t----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418077 70 - 187317192 TAAGC----------TGGGATA--AG-AA-A-AGT----T------T----------A-TT----C----CTACCC-AACAGa-atgctgaaaatga-------aaatat------------ttttt-c--t----ttg----------------------gtt
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402308 70 +  25927173 TAAGC----------TGGGATA--AG-AA-A-AGT----T------T----------A-TT----C----CTACCC-AACAGa-atgctgaaaatga-------aaatat------------ttttt-c--t----ttg----------------------gtt
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51479 70 -     62418 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4010 70 +     14901 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 47952 70 +     59329 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273859 70 +    668171 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2491 70 -      5049 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5657 70 +     17132 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----t----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226340 70 -    270270 taaga----------gagtaga--ag-aa-a-a---gt-t------t---t------t--tt---c----ccactc-tacaG-AATGCTGAGAATGA-------AAATAT------------TTT-T-G--T----TTT----------------------ATT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325147 70 +  24302211 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               359978 70 -    752769 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676622 69 -    737560 taaag----------aggtaga--gg-aa-a-a---aa-t------g---t------t--tt---c----ctaccc-tacaG-AATACTGAGGTTGA-------ATATAT------------TC--C-A--T----TTA----------------------ATT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             223919 68 +    317179 taaag-----------ggtaga--gg-aa-a-a---aa-t------t---t------t--tt---c----ctaccc-tacaG-AATGCTGAGGTTGA-------ATATAT------------TC--C-A--T----TTA----------------------ATT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504563 22 +  40650429 taaga----------tgttaga--gg-aa-a-a---gt-t------t---------------------------------------------------------------------------------------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 20
s Megaderma_lyra.MegLyr_scaffold_4542                       153755 54 +    207569 -------------------------g-aa-a-a---gt-t------t----------t--tt---c----ctgccc-tacaT-AATGCTGAAGATGA-------AAATAT------------T---T-G--T----TTG----------------------AAA
i Megaderma_lyra.MegLyr_scaffold_4542                    I 8 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29342 46 -     74585 ------------------------------------------------------------tt---c----ctGTTC-TGCCT-AATGCTTAGAATGA-------AAATAT------------TTC-C-C--T----CTG----------------------GTT
i Mellivora_capensis.MelCap_flattened_line_19308         I 21 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90626 49 +     93471 ----------------------------------------------a---t------t--tt---g----ttacca-tacaT-AATGCTGAGGATGA-------AAATGT------------TTC-T-A--T----TTG----------------------GTT
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 22 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49469 31 +    145209 ------------------------------------------------------------------------------------ATGCTGAGGATCA-------AAAGAT------------TTC-C-C--T----TTG----------------------GTT
i Microgale_talazaci.MicTal_scaffold_6613                I 73 C 0
s Mico_argentatus.k141_582562                                12284 21 +     17804 tacga----------tgggata--gg-aa-g-aac----t----------------------------------------------------------------------------------------------------------------------------
i Mico_argentatus.k141_582562                            C 0 I 13
s Mico_humeralifer.k141_1189820                                  1 30 +      5551 -ACAAACATCCCCCTGGGGATA--TT-AA-T-ACC----T----------------------------------------------------------------------------------------------------------------------------
i Mico_humeralifer.k141_1189820                          n 34 I 49
s Mico_schneideri.k141_1877700                                     21103 21 -     26561 tacga----------tgggata--gg-aa-g-aac----t----------------------------------------------------------------------------------------------------------------------------
i Mico_schneideri.k141_1877700                                 C 0 I 13
s Micronycteris_hirsuta.MicHir_scaffold_2233                188339 68 +    200668 gaaga----------aagtaga---g-aa-a-a---gt-t------t----------t--tt---c----ttaccc-tacaG-AATGCTGAGGGTGA-------AACTAT------------TTC-T-G--T----TTG----------------------ATG
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368170 65 -   8254450 g---a----------aggtaga---g-aa-a-a---gt-t------t----------t--tt---t----ctactc-tacaG-AATGCTGAgggtaa-------aaatat------------ttc-t-g--t----ttg----------------------atT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             45901 65 -     48117 g---a----------aggtaga---g-aa-a-a---gt-t------t----------t--tt---t----ctactc-tacaG-AATGCTGAGGGTAA-------AAATAT------------TTC-T-G--T----TTG----------------------ATT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25241 70 -     27822 taaga----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11828 49 +     27589 ----------------------------------------------t---t------t--tt---c----ctgctc-tacCG-AATGCTTAGGATGA-------AAATAT------------TTC-C-C--T----CTG----------------------GTT
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 19 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362712 71 +    437263 gaaga----------agataga--ga-aaaa-a---gt-t------a---t------t--tt---c----ttacca-tacaT-AATGCTGAGGATGA-------AAATAT------------TTC-T-A--T----TTG----------------------GTT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182755 67 +    366855 gatga----------aggcaga---g-aa-a-a---gt-t------t----------g--tt---c-----taccc-tacaG-AATGCTGAGGGTGA-------AAATGT------------TTC-T-G--T----TTG----------------------ATT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  31942 44 -     82753 -----------------------------------------------------------------c----ttacct-cacaA-AATGCTGAGGATGA-------AAATAT------------TCC-C-A--T----TTG----------------------GTT
i Moschus_moschiferus.MosMos_scaffold_13123              I 26 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21826 49 -     63510 ----------------------------------------------t---t------t--tt---c----ctgctc-tacaG-AATGCTTAGGATGA-------AAATAT------------TTG-C-C--T----CTG----------------------GTT
i Mungos_mungo.MunMun_flattened_line_18455               I 20 C 0
s Murina_feae.MurFea_scaffold_17764                          45147 65 +     47283 g---a----------aggtaga---g-aa-a-a---gt-t------t----------t--tt---t---cccactG-TACAA-AATGCTAAAGGTAA-------AAATAT------------TTT-G-G--T----TTG----------------------AT-
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               2885 66 -    124358 -atga----------tgataga--gg-aa-a-a---gt-t------t----------t--t---TA----CTACT--TGCAG-GATGCCGAGGATGA-------AAATGT-------------TC-T-C--T----TTG----------------------ATT
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358217 46 +  14710649 ------------------------------------------------------------tt---c----ttGTTC-TGCCT-AGTGCttagaatga-------aaatat------------ttc-c-c--t----CTG----------------------GTT
i Mustela_putorius.JH418006.1                            I 21 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                       964 61 -     27262 taaga----------t----ag--gg-ag-a-a---gt-t-gt---c----------t--tt---g----ctacCA-TATTG-GAG------GCTGG-------AAGTAT------------TT----TTCT----TTG----------------------ATT
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797153 64 +  10118263 g---a----------aggtaga---g-aa-a-a---gt-t------c----------t--tt---t----ctactg-tacaA-AATGCTGAaggtaa-------aaatat------------ttc-t-g--t----ttg----------------------gt-
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391327 64 +   6019432 a---a----------aggtaga---g-aa-a-a---gt-t------c----------t--tt---t----ctactg-tacaA-AATGCTGAaggtaa-------aaatat------------ttc-t-g--t----ttg----------------------at-
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387366 64 +   4330536 g---a----------aggtaga---g-aa-a-a---gt-t------c----------t--tt---t----ctactg-tacaA-AATGCTGAaggtaa-------aaatat------------ttc-t-g--t----ttg----------------------at-
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6153 64 +     18357 a---a----------aggtaga---g-aa-a-a---gt-t------c----------t--tt---t----ctACTG-CACAA-AATGTTGAAGGTAA-------AAATAT------------TTC-T-G--T----TTG----------------------AT-
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nasalis_larvatus.k141_1350636                              32025 71 +     34575 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469275 49 -  31847680 ----------------------------------------------t---t------t--tt---c----ctgctc-tacCG-AATACTTAGGATGA-------AAATAT------------TTC-C-C--T----CTG----------------------ATT
i Neomonachus_schauinslandi.NINY01007730.1               I 19 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235378 71 -   7148211 gaaga----------aggtaga--ga-aaaa-a---gt-t------a---t------t--tt---c----ttacca-tacaT-AATGCTGaggatga-------aaatat------------ttc-t-a--t----ttg----------------------gtt
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131083 68 -    149072 ggaga----------aggtaaa---g-aa-a-a---gt-t------t----------a--tt---t----ctaccc-tacTG-GATACCAAGGGTGA-------AAATGT------------TTC-T-G--T----TTG----------------------CTT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56342 71 -    132029 taaga----------tgggata--gg-aa-a-agct---t------t----------t-tt----c----ctatcc-aacaGA-ATGCTGAAAATGT-------AAATAT------------TTTTT-A--T----TTG----------------------GTT
i Nomascus_annamensis.k141_1771965                       C 0 I 5
s Nomascus_concolor.k141_735679                              12437 71 -     16345 taaga----------tgggata--gg-aa-a-aact---t------t----------t-tt----c----ctatcc-aacaGA-ATGCTGAAAATGT-------AAATAT------------TTTTT-A--T----TTG----------------------GTT
i Nomascus_concolor.k141_735679                          C 0 I 5
s Nomascus_gabriellae.k141_57920                             18326 71 +     22201 taaga----------tgggata--gg-aa-a-agct---t------t----------t-tt----c----ctatcc-aacaGA-ATGCTGAAAATGT-------AAATAT------------TTTTT-A--T----TTG----------------------GTT
i Nomascus_gabriellae.k141_57920                         C 0 I 5
s Nomascus_siki_b.tarseq_93                            8416556 71 -  22158432 taaga----------tgggata--gg-aa-a-aact---t------t----------t-tt----c----ctatcc-aacaGA-ATGCTGAAAATGT-------AAATAT------------TTTTT-A--T----TTG----------------------GTT
i Nomascus_siki_b.tarseq_93                          C 0 I 5
s Nomascus_siki_a.k141_941534                                  28731 71 -     54323 taaga----------tgggata--gg-aa-a-aact---t------t----------t-tt----c----ctatcc-aacaGA-ATGCTGAAAATGT-------AAATAT------------TTTTT-A--T----TTG----------------------GTT
i Nomascus_siki_a.k141_941534                              C 0 I 5
s Nyctereutes_procyonoides.CAJHUB010000658.1                201717 43 +   9404916 ----------------------------------------------------------------------ctgctc-tacaG-AATGCTTAGgatga-------aaatat------------ttc-t-c--t----ctg----------------------ATT
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 25 C 0
s Octodon_degus.JH651603.1                                11059232 61 -  11899542 caaga----------t----ag--ag-ag-a-a---gt-t-gt---c----------t--tt---g----ctacTG-CATTG-GAG------Gctga-------aagtat------------tt----ttct----ttg----------------------att
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1455044 49 +   2017862 ----------------------------------------------t---t------t--tt---c----ctgctc-tacCG-AATGCTTaggatga-------aaatat------------ttc-t-t--t----ctg----------------------gtt
i Odobenus_rosmarus.KB229312.1                           I 19 C 0
s Odocoileus_virginianus.KZ100018.1                         442314 68 -    630418 ga-------------aggtaga--ga-ac-a-a---gt-t------t---tt-----t--at---c----ctctCT-CACAA-AATGCTGAGGATGA-------AAATAT------------TCC-C-A--T----TTG----------------------GTT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          21995 44 +    150152 -----------------------------------------------------------------c----ctacct-tgcaA-AATGCTGAGGATGA-------AAATAT------------TCC-C-A--T----TTG----------------------GTT
i Okapia_johnstoni.LVCL01S0005463.1                      I 26 C 0
s Orcinus_orca.KB316932.1                                  8105783 71 +  10937097 gaaga----------aggtaga--ga-aaaa-a---gt-t------a---t------t--tt---c----ttacca-tacaT-AATGCTGaggatga-------aaatat------------ttc-t-a--t----ttg----------------------gtt
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               2812 31 +     11607 ------------------------------------------------------------------------------------ATGCTGAAGATGA-------AAATAT------------TTC-T-C--T----TTG----------------------GTT
i Orycteropus_afer.OryAfe_flattened_line_201229          I 223 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108455 44 - 174332312 ---------------------------------------------------------t--tt---c----ctatt-ctgcaG-AATGCTg---gtga-------aaatat------------ttc-t-g--t----ttg----------------------gtt
i Oryctolagus_cuniculus.CM000791.1                       I 21 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42667 43 +    559221 ----------------------------------------------------------------------ctgctc-tacaG-AATGCTTAGgatga-------aaatat------------ttc-t-c--t----ctg----------------------ATT
i Otocyon_megalotis.JAEUCK010005147.1                    I 24 C 0
s Ovis_aries.CM001607.2                                   26410737 44 -  44047080 -----------------------------------------------------------------c----ttacct-CACAA-AATGCTGAGGATGA-------AAATAT------------TCC-T-G--T----TTG----------------------GTT
i Ovis_aries.CM001607.2                                  I 26 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11360 44 +     17875 -----------------------------------------------------------------c----ttacct-cacaA-AATGCTGAGGATGA-------AAATAT------------TCC-T-G--T----TTG----------------------GTT
i Ovis_canadensis.OviCan_scaffold_67953                  I 26 C 0
s Pan_paniscus.AJFE02001037.1                                  298 71 +      1186 TAAGA----------TGGGATA--GG-AA-A-AGCT---T------T----------T-TT----C----CTACCC-AACAGA-ATgctgaaaatgt-------aaataa------------ttttt-c--t----ttg----------------------gtt
i Pan_paniscus.AJFE02001037.1                            I 25 C 0
s Pan_troglodytes.CM009242.2                               1476918 71 - 189151597 TAAGA----------TGGGATA--GG-AA-A-AGCT---T------T----------T-TT----C----CTACCC-AACAGA-ATgctgaaaatgt-------aaatat------------ttttt-c--t----tta----------------------gtt
i Pan_troglodytes.CM009242.2                             I 30 I 17
s Panthera_onca.PanOnc_flattened_line_3271                   28295 49 -    230217 ----------------------------------------------t---t------t--tt---c----ctgctc-tacaG-AATGCTTAGGATGA-------GAACAC------------TTC-C-T--T----CTG----------------------GTT
i Panthera_onca.PanOnc_flattened_line_3271               I 20 C 0
s Panthera_pardus.KV860321.1                              18465527 49 -  18783137 ----------------------------------------------t---t------t--tt---c----ctgctc-tacaG-AATGCTTAGGATGA-------GAACAC------------TTC-C-T--T----CTG----------------------GTT
i Panthera_pardus.KV860321.1                             I 20 C 0
s Panthera_tigris.KE722367.1                               3976128 49 +   8748460 ----------------------------------------------t---t------t--tt---c----ctgctc-tacaG-AATGCTTAGGATGA-------AAACAC------------TTC-C-T--T----CTG----------------------GTT
i Panthera_tigris.KE722367.1                             I 20 C 0
s Pantholops_hodgsonii.KE114653.1                          1622255 44 +   2937107 -----------------------------------------------------------------c----ttacct-CACAA-AATGCTGAGGATAA-------AAATAT------------TCC-T-A--T----TTA----------------------GTT
i Pantholops_hodgsonii.KE114653.1                        I 26 C 0
s Papio_anubis.CM001495.2                                   246156 70 - 183742232 TAAGC----------TGGGATA--AG-AA-A-AGT----T------T----------A-TT----C----CTACCC-AACAGa-atgctgaaaatga-------aaatat------------ttttt-c--t----ttg----------------------gtt
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12441 70 +     21308 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295184 70 -  20919399 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25081 70 -     27687 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1760 70 +     10553 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1720 70 -     10386 taagc----------tgggata--ag-aa-a-agt----t------t----------a-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18465 49 +     78924 ----------------------------------------------t---t------t--tt---c----ctgctc-tacaG-AATGCTTAGGATGG-------AAATAC------------TTG-C-C--T----CTT----------------------GTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 20 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7320 89 +      9367 AAAGA----------TAAAAGA--GG-AC-A-C---AC-T------T----------TC-T---TA----CTATCC-TGGCT-AATGCTAAGCATGAATTGGAGAAATATTTCAATCTAAAATTC-T-C--T----TTG----------------------GCT
i Perognathus_longimembris.PerPac_flattened_line_89005   I 10 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35325 65 -     56120 taaga----------tggtcag--ga-ag-a-a---gt-tt-t---t----------t--tt---g----ccACCA-TGTTG-GAG------GCTGA-------AAATAT------------TT----TTCT----TTG----------------------ACT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7304 71 -     63832 gaaga----------aggtaga--ga-aaaa-a---gt-t------a---t------t--tt---c----ttacca-tacaT-AATGCTGAGGATGA-------AAATAT------------TTC-T-A--T----TTG----------------------GTT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5403 70 +     55023 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4925 70 -     89929 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5515 70 +     40849 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATAT------------TTTTT-C--T----TTG----------------------GTT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257245 70 +  14605196 TAAGA----------TGGGATA--GG-AA-A-AGT----T------T----------T-TT----C----CTACCC-AACAGa-atgctgaaaatga-------aaatat------------ttttt-c--t----ttg----------------------gtt
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7671 41 +     22231 ----------------------------------------------------------------------ctactg-tacaA-AATGCTGAAGGTAA-------AAATAT------------TTC-T-G--T----TT-----------------------AT-
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 24 C 0
s Pithecia_albicans.k141_1239476                             66784 71 +    207309 tacga----------tgggata--gg-aa-g-atc----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATCC------------TTTTT-C--T----TTG----------------------GTT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7879 71 -     25401 tacga----------tgggata--gg-aa-g-atc----t------t----------t-ttt---g----ctaccc-aacaGA-ATACTGAAGATGA-------AAATCC------------TTTTT-C--T----TTG----------------------GTT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33625 71 +     58159 tacga----------tgggata--gg-aa-g-atc----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATCC------------TTTTT-C--T----TTG----------------------GTT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33901 71 +     63561 tacga----------tgggata--gg-aa-g-atc----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATCC------------TTTTT-C--T----TTG----------------------GTT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33656 71 +     51148 tacga----------tgggata--gg-aa-g-atc----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATCC------------TTTTT-C--T----TTG----------------------GTT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558632 71 -   4542175 tacga----------tgggata--gg-aa-g-atc----t------t----------t-ttt---g----ctaccc-aacaGA-ATACTGAAGATGA-------AAATCC------------TTTTT-C--T----TTG----------------------GTT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33640 71 +     51125 tacga----------tgggata--gg-aa-g-atc----t------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATCC------------TTTTT-C--T----TTG----------------------GTT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4325 71 +     19503 gaaga----------aggtaga--ga-aaaa-a---gt-g------t---t------t--tt---c----ttacca-tacGT-AATGCTGAGGATGA-------AAATAT------------TTC-T-A--T----TTG----------------------GTT
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10065 71 +     39866 tacga----------tgggata--gg-aa-g-atc----c------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5147 71 -      9282 tacga----------tgggata--gg-aa-g-atc----c------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44551 71 -     87950 tacga----------tgggata--gg-aa-g-atc----c------t----------t-ttt---c----ctacgc-aacaGA-ATGCTGAAGATGA-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     44945 71 -     88961 tacga----------tgggata--gg-aa-g-atc----c------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9643 71 -     39403 tacga----------tgggata--gg-aa-g-atc----c------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44595 71 +     87928 tacga----------tgggata--gg-aa-g-atc----c------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9642 71 -     60166 tacga----------tgggata--gg-aa-g-atc----c------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16563 71 -     67232 tacga----------tgggata--gg-aa-g-atc----c------t----------t-ttt---c----ctaccc-aacaGA-ATGATGAAGATGA-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44495 71 -     90634 tacga----------tgggata--gg-aa-g-atc----c------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          45962 71 +     89403 tacga----------tgggata--gg-aa-g-atc----c------t----------t-ttt---c----ctaccc-aacaGA-ATGCTGAAGATGA-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182103 71 - 189387572 TAATA----------TGGGATA--GG-AA-A-AGCT---T------T----------T-TT----C----CTACCC-AACAGA-ATGCTGAAAATGT-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196846 71 -   9816681 taata----------tgggata--gg-aa-a-agct---t------t----------t-tt----c----ctaccc-aacGGA-ATGCTGAAAATGT-------AAATAC------------TTTTT-C--T----TTG----------------------GTT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30605 71 +     69807 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ttaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47786 71 -     80239 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2577 29 -     12774 ------------------------------------------------------------------------------------ATGCTGAGAATGA-------AAATAT------------TT----C--T----TTG----------------------GCT
i Procavia_capensis.ProCapCap_scaffold_128773            I 82 C 0
s Pteronotus_parnellii.KE847780.1                            55419 66 -     66298 gatga----------aggtagg---g-aa-a-a---gt-t------t----------t--tt---c----ctaccc-tacaG-AATGCTGAGggtga-------aaatat------------t---t-g--t----ttg----------------------att
i Pteronotus_parnellii.KE847780.1                        I 8 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7827 45 -     18639 ------------------------------------------------------------tt---c----ttGTTC-TT-CT-AGTGCTTAGAATGA-------AAATAT------------TTC-C-C--T----CTG----------------------GTT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 21 C 0
s Pteropus_alecto.KB030862.1                               5843958 68 -  28871421 taaga----------gggtaga--ca-aa-a-a---gt-t------t---t------t--t---cc----ccaccc-tacaG-AATGCTGAGgatgc-------aaatat------------t---t-g--t----ttt----------------------att
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540474 68 -   4952924 taaga----------gggtaga--ca-aa-a-a---gt-t------t---t------t--tt---c----ccaccc-tacaG-AATGCTGAGgatgc-------aaatat------------t---t-g--t----ttt----------------------att
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102517 49 +  38429054 ----------------------------------------------t---t------t--tt---c----ctgctc-tacaG-AATGCTTAGGATGA-------AAACAC------------TTC-C-T--T----CTG----------------------GTT
i Puma_concolor.QAVW01001104.1                           I 20 C 0
s Pygathrix_cinerea.k141_1153803                             29972 71 +     91421 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156524 70 -   7812017 taaga----------tgggata--gg-aa-a-ggt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTT--C--T----TTG----------------------GTT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10824 70 +     72585 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTT--C--T----TTG----------------------GTT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4832 68 -     55207 ga-------------aggtaga--ga-ac-a-a---gt-t------t---tt-----t--at---c----ctctCT-CACAA-AATGCTGAGGATGA-------AAATAT------------TCC-C-A--C----TTG----------------------GTT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2917909 47 +   3329780 ---------------------------------------------------------t--tt---c----atattc-tacaG-AATGCTGAAGATGG-------Aaatat------------ttc-t-g--t----ttg----------------------att
i Rhinolophus_sinicus.LVEH01000134.1                     I 21 C 0
s Rhinopithecus_bieti.k119_778604                             4430 71 +      7119 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAACATT-----------TTTTT-C--T----TTG----------------------GTT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125100 71 + 195417433 TAAGA----------TGGGATA--GG-AA-A-AGT----T------T----------T-TT----C----CTACCC-AACAGA-atgctgaaaatga-------aaacat-----------gttttt-c--t----ttg----------------------gtT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239272 71 -   7961872 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAACATT-----------TTTTT-C--T----TTG----------------------GTT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78452 70 -    116970 taaga----------gggcaga--ag-aa-a-a---gt-t------t---t------t--tt---c----ccaccc-tacaG-AATGCTGAGGATGA-------AAATAT------------TTC-T-G--T----TTT----------------------ATT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 321
s Saiga_tatarica.SaiTat_scaffold_39512                       14307 44 +     16473 -----------------------------------------------------------------c----ttacct-cacaA-AATGCTGAGGATGA-------AAATAT------------TCC-C-A--T----TTG----------------------GTT
i Saiga_tatarica.SaiTat_scaffold_39512                   I 26 C 0
s Saguinus_bicolor.k141_161125                                9232 21 +     12412 tacga----------tgggata--gg-aa-g-aat----t----------------------------------------------------------------------------------------------------------------------------
i Saguinus_bicolor.k141_161125                           C 0 I 13
s Saguinus_geoffroyi.k141_356064                               689 21 +      9876 tacga----------tgagata--gg-aa-g-aat----t----------------------------------------------------------------------------------------------------------------------------
i Saguinus_geoffroyi.k141_356064                         C 0 I 13
s Saguinus_imperator.k141_2710097                            16293 21 -     24931 TACGA----------TGGGATA--GA-AA-G-AAT----T----------------------------------------------------------------------------------------------------------------------------
i Saguinus_imperator.k141_2710097                        C 0 I 13
s Saguinus_inustus.k141_4502137                               1173 21 +      4564 tacga----------tgggata--gg-aa-g-aat----t----------------------------------------------------------------------------------------------------------------------------
i Saguinus_inustus.k141_4502137                          C 0 I 13
s Saguinus_labiatus.k141_264497                               3978 21 -      7443 tatga----------tgggata--gg-aa-g-aat----t----------------------------------------------------------------------------------------------------------------------------
i Saguinus_labiatus.k141_264497                          C 0 I 13
s Saguinus_midas.LG03                                       394885 21 - 209938924 tacga----------tgggata--gg-aa-g-aat----t----------------------------------------------------------------------------------------------------------------------------
i Saguinus_midas.LG03                                    C 0 I 13
s Saguinus_mystax.k141_6319370                                1593 21 +     10149 tatga----------tgggata--gg-aa-g-aat----t----------------------------------------------------------------------------------------------------------------------------
i Saguinus_mystax.k141_6319370                           C 0 I 13
s Saguinus_oedipus.k141_1368863                                930 21 +     10417 tacga----------tgagata--gg-aa-g-aat----t----------------------------------------------------------------------------------------------------------------------------
i Saguinus_oedipus.k141_1368863                          C 0 I 13
s Saimiri_boliviensis.NW_024100920.1                       1111059 22 + 121099817 TATGA----------TGggata--gattt-t-ttc----t----------------------------------------------------------------------------------------------------------------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 13
s Saimiri_cassiquiarensis.k141_1467335                       32629 22 -     47369 tatga----------tgggata--gaTTT-T-TTC----T----------------------------------------------------------------------------------------------------------------------------
i Saimiri_cassiquiarensis.k141_1467335                   C 0 I 13
s Saimiri_macrodon.k141_1173117                              33013 22 -     79414 TATGA----------TGGGATA--GATTT-T-TTC----T----------------------------------------------------------------------------------------------------------------------------
i Saimiri_macrodon.k141_1173117                          C 0 I 13
s Saimiri_oerstedii.k141_245838                              29704 22 -     34454 TATGA----------TGGGATA--GATTT-T-TTC----T----------------------------------------------------------------------------------------------------------------------------
i Saimiri_oerstedii.k141_245838                          C 0 I 13
s Saimiri_sciureus.k141_1467173                              17106 22 -     22428 TATGA----------TGGGATA--GATTT-T-TTC----T----------------------------------------------------------------------------------------------------------------------------
i Saimiri_sciureus.k141_1467173                          C 0 I 13
s Saimiri_ustus.k141_360372                                  32259 22 -     47109 tatga----------tgggata--gaTTT-T-TTC----T----------------------------------------------------------------------------------------------------------------------------
i Saimiri_ustus.k141_360372                              C 0 I 13
s Sapajus_apella.ctg103                                     240284 21 +   5703754 tatga----------tgggata--aa-aa-t-aac----t----------------------------------------------------------------------------------------------------------------------------
i Sapajus_apella.ctg103                                  C 0 I 13
s Sapajus_macrocephalus.k141_796559                           9875 21 +     21866 tatga----------tgggata--aa-aa-t-aac----t----------------------------------------------------------------------------------------------------------------------------
i Sapajus_macrocephalus.k141_796559                      C 0 I 13
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122293 95 +    313613 ca-ga----------aagcaga--gc-aa-a-a---gc-t------t---------ac--tt---c----ctaccc-tgcaC-ACTGCTGAGAATGA-------AAATAC------------TTT-T-T--TCAGGAAATATTTCAGAAAATATTTCTTTTCTT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1411 71 +     11297 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31804 71 +     58920 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18302 71 -     45317 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            25960 71 -     42441 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28636 71 -     29113 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31713 71 -     48123 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867066 70 -   1910179 taaga----------ggataga--gg-aa-a-a---gt-t------t---------at--tt---c----ctatcc-taGAG-AATACTGAGTATCA-------AAATAT------------TTC-T-C--T----TTA----------------------GTT
i Solenodon_paradoxus.SolPar_flattened_line_126          I 6 C 0
s Sorex_araneus.JH798187.1                                 4674330 28 +  18376816 tgaga----------gaa-aaa--gg-aa-a-a---gt-t------t---------at--c---TC----CA--------------------------------------------------------------------------------------------
i Sorex_araneus.JH798187.1                               I 8 I 30
s Spermophilus_dauricus.KZ294078.1                         1871904 64 +   3870691 taaga----------tgttaga--gg-aa-a-a---gt-t------t---tt-----t--tt---a---aatatcc-taaa----------aaatga-------aaatat------------ttc-t-t-tt----ttg----------------------att
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16048 49 -     97271 ----------------------------------------------t---t------t--tt---c----ctgctc-tgcTA-AATGCTTAGGATGA-------AAATCT------------TTC-C-C--T----CTG----------------------GTT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 19 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128675 49 +    196729 ----------------------------------------------t---t------t--tt---c----ctgctc-tacaG-AATGCTTAGGATGA-------AAATAT------------TTG-C-C--T----CTG----------------------GTT
i Suricata_suricatta.SurSur_flattened_line_6629          I 20 C 0
s Sus_scrofa.CM000828.4                                    6647914 79 +  69701581 tagga----------ggacaga--gg-aa-a-a---gt-ttcttttt---t------t--ttttcc----ttagcc-tgCAA-AATGCTgaggataa-------aaatat------------ttc-t-a--t----ttg----------------------gtt
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393813 71 +   1523678 taaga----------tgggata--gg-aa-a-agct---t------t----------t-tt----c----ctatcc-aacaGA-ATGCTGAAAATGT-------AAATAT------------TTTTT-A--T----TTG----------------------GTT
i Symphalangus_syndactylus.tarseq_199                    C 0 I 5
s Tadarida_brasiliensis.TadBra_scaffold_54991                17385 44 +     22964 -----------------------------------------------------------------t----ctactc-tacaG-AATGCTGAGGGTAA-------AAATAT------------TTC-T-G--T----TTG----------------------ATT
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 26 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194755 71 +    199430 taaga----------ggttaga--gg-aa-a-a---gt-t------t---tt-----t--tt---c----ctaccc-tacaG-AATGCTGAGGATGA-------GACTAT------------CTC-T-C--T----TTG----------------------GTT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108735 71 -    539355 taaga----------ggttaga--gg-aa-a-a---gt-t------t---tt-----t--tt---c----ctaccc-tataG-AATGCTGAGGATGA-------GACTAT------------TTC-T-C--T----TTG----------------------GTT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4364 71 +      9917 taagc----------tagaata--gg-aa-a-agc-c--t------t----------t-ttt---c----ctgcca-tacaGA-AAGCTGAGAATGA-------AAGTAT------------TTC-T-C--T----TTT----------------------GTT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11160 71 +     20590 taagc----------tagaata--gg-aa-a-agc-c--t------t----------t-ttt---c----ctgcca-tgcaGA-AAGCTGAGAATGA-------AAGTAT------------TTC-T-C--T----TTT----------------------GTT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           355965 70 - 186847797 TAAGC----------TGGGATA--AG-AA-A-AGT----T------T----------A-TT----C----TTACCC-AACAGa-atgctgaaaatga-------aaatat------------ttttt-c--t----ttg----------------------gtt
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27602 66 -     33621 taaga----------cggtcag--gg-ag-g-a---gt-t-gt---t----------t--t---cg----ctaccc-taTTG-GAG------GCTGA-------AAATAT------------TT---TTTCT----TTG----------------------ATT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22375 31 -     31044 ------------------------------------------------------------------------------------ATGCTGGGGATTA-------AACTGT------------TTC-T-C--T----CTG----------------------GTT
i Tolypeutes_matacus.TolMat_scaffold_31955               I 79 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483683 53 -    610378 ------------------------------a-a---gt-t------t----------t--tt---c----ctaccc-tacaG-AATGCTGAGGGTGA-------AAATAT------------TTC-T-G--T----TTG----------------------ATT
i Tonatia_saurophila.TonSau_scaffold_294                 I 18 C 0
s Trachypithecus_auratus.k141_1189070                        23712 71 +     26378 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36511 71 -     78344 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23037 71 +     25722 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31467 71 -     62838 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31458 71 +     46913 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12195 71 -     28527 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33398 71 -     64340 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31436 71 -     63452 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12887 71 +     22490 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          853 71 +      9911 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----GTG----------------------GTT
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          648 71 -     33539 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258407 71 -   6242583 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4426 71 +     19340 taaga----------tgggata--gg-aa-a-agt----t------t----------t-tt----c----ctaccc-aacaGA-ATGCTGAAAATGA-------AAATATT-----------TTTTT-C--T----TTG----------------------GTT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177541 69 -    200418 --aga----------agataaa--ga-aa-a-a---aa-t------g---tt-----t--t---cc----ctacca-tacaA-CATGCTGAATTTGA-------AAATAT------------TTC-T-A--T----TTC----------------------GTT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485383 31 -  10818551 ------------------------------------------------------------------------------------ATGCTGAGGATGA-------AAATAT------------TTC-T-C--T----TTG----------------------GTT
i Trichechus_manatus.JH594705.1                          I 82 C 0
s Tupaia_chinensis.KB320699.1                              1839328 51 -   4065304 --------------------------------a---gt-a------t----------t--tt---c----ctaccc-tgcaG--ATGATGAGGATGA-------AATGAC------------TTC-T-A--T----TTG----------------------GTG
i Tupaia_chinensis.KB320699.1                            I 16 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13422 51 -     70247 --------------------------------a---gt-a------c----------t--tt---c----ctaccc-tgcaG--AGGATGAGGATGA-------AAATAC------------TTC-T-A--T----TTG----------------------GTG
i Tupaia_tana.TupTan_flattened_line_394                  I 16 C 0
s Tursiops_truncatus.MRVK01000835.1                       17368907 71 -  33153633 gaaga----------aggtaga--ga-aaaa-a---gt-t------a---t------t--tt---c----ttacca-tacaT-AATGCTGAGggtga-------aaatat------------ttc-t-a--t----ttg----------------------gtt
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Ursus_maritimus.KK499267.1                                185251 49 +   5085361 ----------------------------------------------t---t------t--tt---c----ctgctc-tacCT-AATGCTTAGGATGC-------AAATAT------------TTC-C-C--T----CTG----------------------GTT
i Ursus_maritimus.KK499267.1                             I 19 I 5
s Vicugna_pacos.KN270157.1                                   79456 49 +   5488506 ----------------------------------------------t---t------t--tt---c----ctgccc-tacaA-AATGCTGAGGATGA-------AAATAC------------TTC-T-A--T----TTG----------------------GTT
i Vicugna_pacos.KN270157.1                               I 17 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108611 43 -    112863 ----------------------------------------------------------------------ctgctc-tacaG-AATGCTTAGGATGA-------AAATAT------------TTC-T-C--T----CTG----------------------ATT
i Vulpes_lagopus.VulLag_flattened_line_12041             I 25 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7141 18 -     21056 taaag----------aagccaa--gg-aa-a-a-----------------------------------------------------------------------------------------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 14
s Xerus_inauris.XerIna_scaffold_2302                        177780 53 -    224448 taaga----------tgttaga--gg-aa-a-a---gc-t------t----------t--tt---t---actatcc-taca----------GGATGA-------AAATAT------------TTC-T-------------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 6
s Zalophus_californianus.ZalCal_flattened_line_17732         32253 46 -     86975 ------------------------------------------------------------tt---c----ctgctc-tacCG-AATGCTTAGGATGA-------AAATAT------------TTC-T-T--T----CTG----------------------GTT
i Zalophus_californianus.ZalCal_flattened_line_17732     I 21 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639             868 71 +      3447 gaaga----------aggtaga--ga-aaaa-a---gt-t------a---t------t--tt---g----ttacca-tacaT-AATGCTGAGGATGA-------AAATGT------------TTC-T-A--T----TTG----------------------GTT
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Nannospalax_galili.KL204047.1                             950156 17 +   3037898 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Zapus_hudsonius.ZapHud_scaffold_11398                       4514  0 -     63895 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    52716 15 +     77746 I
e Rattus_norvegicus.chr16                                 37025869 17 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            40662 17 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         250931 17 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    7712 17 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    97170 17 -    140218 I
e Mus_spretus.CM004101.1                                  39500209 17 + 130317789 I
e Mus_pahari.LT608297.1                                   58219252 17 +  89631738 I
e Mus_musculus.chr8                                       41691290 17 + 129401213 I
e Mus_caroli.LT608237.1                                   35597750 17 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15966555 17 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53128 17 -    140813 I
e Jaculus_jaculus.JH725527.1                               1242770 296 +   9596543 I
e Ellobius_talpinus.LOJH01026522.1                           17069 17 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          35140 17 +    110024 I
e Cricetulus_griseus.LT883664.1                          213118941 17 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 47428 16 -     83289 I
e Allactaga_bullata.AllBul_scaffold_20030                    21217 300 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28733 17 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9839 17 +     36723 TAC-AG---TAA---T-A---AGGA----GTG
s Acinonyx_jubatus.LLWD01001279.1                           816340 18 +   1699592 TATCGA---TAA---T-G---ATGA----GTT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418843 17 +  29979442 TAC-AA---TAA---T-G---ACAA----ATT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            218843 17 +    347723 TAC-AA---TAG---T-G---ATGA----att
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50784 17 +     53615 TAC-AG---TAA---T-A---AGGA----GTG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2811 17 +     13857 TAC-AG---TAA---T-A---AGGA----GTG
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19366 17 -     21945 TAC-AG---TAA---T-A---AGGA----GTG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21051 17 +     32033 TAC-AG---TAA---T-A---AGGA----GTG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74313 17 -     84148 TAC-AG---TAA---T-A---AGGA----GTG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46558 17 -     78289 TAC-AG---TAA---T-A---AGGA----GTG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             45983 17 +     55831 TAC-AG---TAA---T-A---AGGA----GTG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44445 17 -     64179 TAC-AG---TAA---T-A---AGGA----GTG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1553 17 -      3959 TAC-AG---TAA---T-A---AGGA----GTG
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43070 17 +     45454 TAC-AG---TAA---T-A---AGGA----GTG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48719 17 +     70886 TAC-AG---TAA---T-A---AGGA----GTG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10889 17 +     30854 TAC-AG---TAA---T-A---AGGA----GTG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35025 17 +     42133 TAC-AG---TAA---T-A---AGGA----GTG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592040 17 +   2318259 TAC-AG---TAA---T-G---AGAG----ATA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180447 17 -    412891 TAC-AA---TAA---C-A---TTGA----TTT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53196 17 -     68529 TAC-AG---TAA---T-G---ATGG----ATT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3230 17 +     17741 TAC-AG---TAA---T-A---AGGA----GTG
i Aotus_azarae.k141_887050                               I 13 C 0
s Aotus_griseimembra.k141_3192254                             3855 17 -     15923 TAC-AG---TAA---T-A---AGGA----GTG
i Aotus_griseimembra.k141_3192254                        I 13 C 0
s Aotus_nancymaae.KZ198451.1                                674137 17 +   5030052 TAC-AG---TAA---T-A---AGGA----gtg
i Aotus_nancymaae.KZ198451.1                             I 13 C 0
s Aotus_trivirgatus.k141_318729                               4131 17 -     16391 TAC-AG---TAA---T-A---AGGA----GTG
i Aotus_trivirgatus.k141_318729                          I 13 C 0
s Aotus_vociferans.k141_1514463                               3690 17 -     17186 TAC-AG---TAA---T-A---AGGA----GTG
i Aotus_vociferans.k141_1514463                          I 13 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27301 12 -     32367 A----A---TAT---T-T---TT------CTT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  8961 17 -     15198 TAC-AA---TGC---T-G---TTGA----TTT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276786 17 +  21539123 TAC-AG---TAA---T-A---AGGA----GTG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12952 17 +     48076 TAC-AG---TAA---T-A---AGGA----GTG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8090 17 -     28759 TAC-AG---TAA---T-A---AGGA----GTG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35643 17 +     44353 TAC-AG---TAA---T-A---AGGA----GTG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51014 17 -     71267 TAC-AG---TAA---T-A---AGGA----GTG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25070 17 -     33135 TAC-AG---TAA---T-A---AGGA----GTG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966701 17 -  23207421 TAC-AG---TAA---T-G---ATGG----ATT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3202 17 -     25979 TAC-AG---TAA---T-G---ATGG----ATT
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93029 17 +    124022 TAC-AG---TAA---T-G---AGGG----ATT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36229 17 +    288883 TAC-AG---TAA---T-G---AGGG----ATT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423369 17 -  48749331 TAC-AG---TAA---T-G---AGgg----att
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      768970 17 +   1948126 TAC-AG---TAA---T-G---AGgg----att
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559515 17 -  45695690 TAC-AG---TAA---T-G---AGgg----att
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536196 17 -   4408762 TAC-AG---TAA---T-G---AGGG----ATT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9877 17 +     28062 TAC-AG---TAA---T-A---AGGA----GTG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45168 17 -     91139 TAC-AG---TAA---T-A---AGAA----GTG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22695 17 +     95584 TAC-AG---TAA---T-A---AGGA----GTG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22608 17 +    119600 TAC-AG---TAA---T-A---AGGA----GTG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12218 17 +     18648 TAC-AG---TAA---T-A---AGGA----GTG
i Callibella_humilis.k141_1233062                        I 13 C 0
s Callimico_goeldii.k141_1609886                             11726 17 -     13885 TAC-AG---TAA---T-A---AGGA----GTG
i Callimico_goeldii.k141_1609886                         I 13 C 0
s Callithrix_geoffroyi.k119_459277                            3825 17 -      8861 TAC-AG---TAA---T-A---AGGA----GTG
i Callithrix_geoffroyi.k119_459277                       I 13 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456217 17 + 189096842 TAC-AG---TAA---T-A---AGGA----GTG
i Callithrix_jacchus.pat_scaffold_3                      I 13 C 0
s Callithrix_kuhlii.k119_102356                               3739 17 +      8664 TAC-AG---TAA---T-A---AGGA----GTG
i Callithrix_kuhlii.k119_102356                          I 13 C 0
s Camelus_bactrianus.KN276810.1                            7634113 17 +  17673402 TAC-AG---TAA---T-G---ATGG----ATT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4668414 17 +   7040546 TAC-AG---TAA---T-G---ATGG----ATT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1212102 17 +   1652518 TAC-AG---TAA---T-G---ATGG----ATT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42508788 17 +  60362399 TAC-AA---TAA---T-G---ATGG----ATT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12423 17 -     23171 TAC-AA---TAA---T-G---ATGG----ATT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225764 17 +   9314153 TAC-AA---TAA---T-G---ATGG----ATT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41618901 17 +  59632846 TAC-AA---TAA---T-G---ATGG----ATT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110482 17 -  63665305 TAC-AA---TAA---T-G---ATGG----ATT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416044 17 -  46296322 TAC-AG---TAA---C-G---AGAG----ATA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598041 17 +  44709034 TAC-AG---TAA---C-G---AGAG----ATA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    1959 11 -     20114 T----A---CAA---T-G---ATGG-------
i Capromys_pilorides.CapPil_scaffold_26391               C 0 I 2
s Carlito_syrichta.NW_007259797.1                           274244 17 +    496798 tac-aA---TAA---T-G---ATga----atg
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               3835 17 +      9923 TAC-AA---TAA---T-G---TTGA----TTT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31536 14 -     39886 T----A---AAA---T-G---ATGG----ATG
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83041 17 -    217609 TAC-AC---GAA---T-G---ATCA----ATT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4999938 14 +  23392119 C----A---CAA---C-A---ATGa----gtg
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5003379 14 +  23407841 t----a---caa---c-a---atga----gtg
i Cavia_porcellus.DS562891.1                             I 7 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          267 14 -    143979 T----A---CAA---C-A---ATGA----GTG
i Cavia_tschudii.CavTsc_scaffold_8919                    I 7 C 0
s Cebuella_niveiventris.k141_592277                           7138 17 -     12580 TAC-AG---TAA---T-A---AGGA----GTG
i Cebuella_niveiventris.k141_592277                      I 13 C 0
s Cebuella_pygmaea.k141_145798                               45194 17 +     53515 TAC-AG---TAA---T-A---AGGA----GTG
i Cebuella_pygmaea.k141_145798                           I 13 C 0
s Cebus_albifrons.Contig27                                  375927 17 -  26074798 TAC-AG---TAA---T-A---AGGA----GTG
i Cebus_albifrons.Contig27                               I 13 C 0
s Cebus_olivaceus.k141_1404781                                9998 17 -     34880 TAC-AG---TAA---T-A---AGGA----GTG
i Cebus_olivaceus.k141_1404781                           I 13 C 0
s Cebus_unicolor.k141_1654760                                69094 17 -     89041 TAC-AG---TAA---T-A---AGGA----GTG
i Cebus_unicolor.k141_1654760                            I 13 C 0
s Cephalopachus_bancanus.k141_1140705                         1907 17 -     76265 TGC-AA---TAA---T-G---ATGG----ATG
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495368 17 -  27778364 TAC-AA---TAA---T-G---ACga----att
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22201 17 +     27315 TAC-AA---TAA---T-G---ACGA----ATT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143867 17 -   4669795 tac-aG---TAA---T-A---AGGA----gtg
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47606 17 +     47900 TAC-AG---TAA---T-A---AGGA----GTG
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3039 17 -     14410 TAC-AG---TAA---T-A---AGGA----GTG
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47421 17 -    148725 TAC-AG---TAA---T-A---AGGA----GTG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29699 17 -     40656 TAC-AG---TAA---T-A---AGGA----GTG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9658 17 +     20796 TAC-AG---TAA---C-A---AGGA----GTG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14771 17 -     17524 TAC-AG---TAA---T-A---AGGA----GTG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30504 17 -     34525 TAC-AG---TAA---T-A---AGGA----GTG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14282 17 -     25376 TAC-AG---TAA---T-A---AGCA----GTG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366871 17 -  39242232 TAC-AG---TAA---T-A---AGGA----GTG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272596 17 +  21565898 TAC-AG---TAA---T-A---AGCA----GTG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34963 17 -     45857 TAC-AG---TAA---T-A---AGGA----GTG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29864 17 -     32606 TAC-AG---TAA---T-A---AGGA----GTG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6024 17 +      8499 TAC-AG---TAA---T-A---AGGA----GTG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28424 17 +     70610 TAC-AG---TAA---T-A---AGCA----GTG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25386 17 +     36323 TAC-AG---TAA---T-A---AGGA----GTG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15308 17 -     19938 TGC-AA---AAA---T-G---ATGG----GCC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10963 17 -     32913 TAC-AG---TAA---T-A---AGGA----GTG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21376 17 -     40346 TAC-AG---TAA---T-A---AGGA----GTG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21630 17 +    216457 TAC-AG---TAA---T-A---AGGA----GTG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21420 17 +     39636 TAC-AG---TAA---T-A---AGGA----GTG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33369 17 -     52013 TAC-AG---TAA---T-A---AGGA----GTG
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44509 17 -    112038 TAC-AG---TAA---T-A---AGGA----GTG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10059 17 +     34062 TAC-AG---TAA---T-A---AGGA----GTG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346286 17 +  18827391 TAC-AG---TAA---T-A---AGGA----GTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12825 17 -     44032 TAC-AG---TAA---T-A---AGGA----GTG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307672 17 - 135778131 tac-aG---TAA---T-A---AGGA----gtg
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 1987 17 +     10270 TGC-AA---TAA---T-G---ATGG----GCA
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            609464 17 -    839153 TGC-AA---taa---t-g---atgg----gca
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2210 17 -      4087 TAT-AA---TAA---T-A---ATGG----GTC
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412080 17 -   2368649 tac-aG---TAA---T-A---AGGA----gtg
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381962 17 - 200372422 TAC-AG---TAA---T-A---AGGA----GTG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5514 17 -     84244 TAC-AG---TAA---T-A---AGGA----GTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810558 17 +  53390261 TAT-AA---CAA---T-G---ATGA----ATT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6114 17 -      8242 TAT-AA---TAA---T-A---ACAA----ATT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12367 17 +     12657 TAT-AA---TAG---T-G---ATGA----ATT
i Crocidura_indochinensis.CroInd_scaffold_77846          I 30 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7724 17 +     87169 TAT-GA---TAA---T-G---ATGA----ATT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    649998 17 -   1526836 C----A---TAA---C-AATGATGA----TTG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22634 17 +     50838 T----A---CAA---C-A---ATGGTGA-ATG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12126 17 +     36344 T----A---CAA---C-A---ATGATGG-GTG
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31567 17 +     75252 T----A---CAA---C-A---ATGATGG-GTG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2112666 17 -   2246927 TGC-AA---AAA---C-G---ACGG----GTC
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635105 17 -  35494412 TAC-AG---TAA---T-G---ATGG----ATT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11868827 17 -  20541912 GAC-AA---TAA---T-G---TTGA----CTT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667639 17 -   1390856 TAC-AA---TAA---T-G---ATga----att
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142441 17 -    198055 TAC-AA---TAA---T-G---ACGA----ATT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955200 17 -  37912305 T----A---AAACAAT-G---GTAG----ATG
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                    812 17 +     14058 T----A---AAACAAT-G---GTGG----AGG
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 12699 17 +     14636 T----A---CAA---C-A---ATGATGG-GTG
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62858325 17 - 111700974 TGT-AG---TAA---T-A---ATGG----GTC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9476 17 +     19438 tac-aa---taa---t-g---atAA----ATT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       245830 17 -    607251 TAC-AG---TAA---T-G---ATgg----att
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9113378 17 -  10337057 TAC-AA---TAA---T-A---ATGG----TCT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925375 17 +  41312741 TAC-AA---TAA---T-G---ATGa----atg
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582596 17 +  14770903 taC-AG---TAA---T-G---TTga----att
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045105 17 -   4378816 taC-AG---TAA---T-T---AGga----att
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379035 17 +  39960074 tac-AG---TAA---T-T---Agga----att
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415017 17 -    498745 tac-AG---TAA---T-T---AGga----att
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671326 18 +   7059049 TAT-GA--TTAA---T-G---GTTA----CTT
i Erinaceus_europaeus.JH835339.1                         I 5 C 0
s Erythrocebus_patas.Contig38                               265814 17 +  21539334 TAC-AA---TAA---T-A---AGGA----GTG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74315 17 -    133382 TAC-AG---TAA---T-G---ATGG----ATT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2030 17 +     25849 TAC-AG---TAA---T-G---ATGG----ATT
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250342 18 - 206538554 TATCGA---TAA---T-G---ATGA----GTT
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120298 18 - 205367284 TATCGA---TAA---T-G---ATGA----GTT
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                   940 18 +     25330 TATCGA---TAA---T-G---ATGA----GTT
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2925930 17 -   3816255 g----a---CAA---C-A---ATGAT-AGGTg
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                4902 17 -     28519 TGC-AA---TAA---T-G---ATGG----GTG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2088 17 +    660261 TAC-AG---TAA---T-G---ATgg----att
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            4924 14 -      6791 T----A---TAA---T-G---ATGG----CTG
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_935316                                 920 17 +     34797 TAC-AG---TAA---T-A---AGGA----GTG
i Gorilla_beringei.k141_935316                           I 71 I 19
s Gorilla_gorilla.LT578336.1                                 75507 17 +  33314783 tac-aG---TAA---T-A---AGGA----gtg
i Gorilla_gorilla.LT578336.1                             I 71 I 19
s Graphiurus_murinus.GraMur_scaffold_10447                    6839 14 -     78134 T----A---TAA---T-G---ATGG----CTG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34126 17 -    327341 TAT-GA---TAA---T-A---ATGA----ATT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15755 17 +     48891 TAC-AG---TAA---T-G---AGAG----AGA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938369 17 -  22651954 g----a---CAA---C-A---ATGATGC-GTG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6074 17 +      8654 TGC-AG---TAA---T-A---ATAG----ATG
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11142 17 -     36432 TAC-AG---TAA---T-G---ATGG----ATT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556190 10 -   1711038 TAC-AA---Taa---t-a--------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_363447                559 10 +       852 TAC-AA---TAA---T-A--------------
i Hipposideros_galeritus.HipGal_scaffold_363447          I 68 I 3
s Hoolock_leuconedys.ctg274                                    145483  9 -    630532 ---------------T-A---AGAA----GTG
i Hoolock_leuconedys.ctg274                                 I 5 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73761 17 +     83186 TAT-GA---TAA---T-G---ATGA----ATT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75314 17 +    143317 T----A---CAA---C-A---ATGATGG-GTG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               8530  9 +     12352 ---------------T-A---AGGA----GTG
i Hylobates_agilis.k141_1155965                          I 5 C 0
s Hylobates_klossii.k141_738755                              15717  9 +     55766 ---------------T-A---AGGA----GTG
i Hylobates_klossii.k141_738755                          I 5 C 0
s Hylobates_pileatus_b.LG02                                       2055245  9 + 191637585 ---------------T-A---AGGA----GTG
i Hylobates_pileatus_b.LG02                                     I 5 C 0
s Hylobates_pileatus_a.tarseq_633                            7804123  9 +  11177569 ---------------T-A---AGGA----GTG
i Hylobates_pileatus_a.tarseq_633                          I 5 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11150 14 -    135385 T----A---TAA---T-A---ATGC----TGG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 41
s Ictidomys_tridecemlineatus.JH393364.1                     390405 17 +   7955117 t----a---caTCGGT-G---AGAA----CTG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13209 17 -     16823 TAC-AG---TAA---T-G---ATGG----ATT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75047 17 -     97402 TAC-AG---TAA---T-G---ATGG----ATT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45336 17 +    110728 TAC-AG---TAA---T-A---AGGA----GTG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1283 17 -     25587 AGC-AG---TAA---T-G---TTGA----ATT
i Lasiurus_borealis.LasBor_scaffold_61236                I 67 C 0
s Leontocebus_fuscicollis.k141_3470480                         774 17 -     23187 TAC-AG---TAG---T-A---AGGA----GTG
i Leontocebus_fuscicollis.k141_3470480                   I 13 C 0
s Leontocebus_illigeri.k141_2759473                           1087 17 -     14280 TAC-AG---TAG---T-A---AGGA----GTG
i Leontocebus_illigeri.k141_2759473                      I 13 C 0
s Leontocebus_nigricollis.k141_1320036                         729 17 +      3713 TAC-AG---TAG---T-A---AGGA----GTG
i Leontocebus_nigricollis.k141_1320036                   I 13 C 0
s Leontopithecus_chrysomelas.k141_3286424                      919 17 +      8855 TAC-AG---TAA---T-A---AGGA----GTG
i Leontopithecus_chrysomelas.k141_3286424                I 13 C 0
s Leontopithecus_rosalia.k141_1583055                         5721 17 -     13645 TAC-AG---TAA---T-A---AGGA----GTG
i Leontopithecus_rosalia.k141_1583055                    I 13 C 0
s Leptonychotes_weddellii.KB714746.1                        816644 18 -   3914936 TAC-AA---TAA---TTT---GTAA----att
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     21838 17 +     24238 T----ACAGTAA---T-T---ACAG----GTG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344391 17 +    662738 TAC-AG---TAA---T-G---ATGG----ATT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336749 17 -   1826925 TAC-AG---GAA---T-A---AGGA----GTG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39087816  7 +  43346337 ---------------------ATGA----GTC
i Loxodonta_africana.GL010049.1                          I 4 C 0
s Lycaon_pictus.CM007581.1                                41618056 17 +  59628241 TAC-AA---TAA---T-G---ATGG----ATT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48141 17 -     61512 TAC-AG---TAA---T-A---AGGA----GTG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375803 17 -  60120075 TAC-AG---TAA---T-A---AGGA----GTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28071 17 +     30207 TAC-AG---TAA---T-A---AGGA----GTG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2909 17 -      5035 TAC-AG---TAA---T-A---AGGA----GTG
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28024 17 +     30527 TAC-AG---TAA---T-A---AGGA----GTG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39200 17 -     50087 TAC-AG---TAA---T-G---AGGA----GTG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48945 17 +     51645 TAC-AG---TAA---T-A---AGGA----GTG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418147 17 - 187317192 tac-aG---TAA---T-A---AGGA----gtg
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402378 17 +  25927173 tac-aG---TAA---T-A---AGGA----gtg
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51549 17 -     62418 TAC-AG---TAA---T-A---AGGA----GTG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4080 17 +     14901 TAC-AG---TAA---T-A---AGGA----GTG
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48022 17 +     59329 TAC-AG---TAG---T-A---AGGA----GTG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273929 17 +    668171 TAC-AG---TAA---T-G---AGGA----GTG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2561 17 -      5049 TAC-AG---TAA---T-A---AGGA----GTG
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5727 17 +     17132 TAC-AG---TAA---T-A---AGGA----GTG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226410 17 -    270270 TAC-AA---TAA---T-G---ATAC----ATT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325217 17 +  24302211 TAC-AG---TAA---T-A---AGGA----GTG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360048 17 -    752769 TAC-AG---TAA---T-A---AGGA----GTG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676691 16 -    737560 TAC-AA---TAG---T-G---ATGA-----TT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             223987 17 +    317179 TAC-AG---TAG---T-G---ATGA----ATT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504605 17 +  40650429 t----a---caTCGAT-G---ATAA----CTG
i Marmota_marmota.CZRN01000018.1                         I 20 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       153809 17 +    207569 TAC-AG---TAA---T-G---ATGA----ATT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29388 17 -     74585 TAC-AA---TAA---T-G---ATGA----ATG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90675 17 +     93471 TAC-AG---TAA---T-G---ATGG----ATT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12318 17 +     17804 TAC-AG---TAA---T-A---AGGA----GTG
i Mico_argentatus.k141_582562                            I 13 C 0
s Mico_humeralifer.k141_1180625                              12818 17 -     12984 TAC-AG---TAA---T-A---AGGA----GTG
i Mico_humeralifer.k141_1180625                          I 34 C 0
s Mico_schneideri.k141_1877700                                     21137 17 -     26561 TAC-AG---TAA---T-A---AGGA----GTG
i Mico_schneideri.k141_1877700                                 I 13 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49500 17 +    145209 TAT-AG---TAA---C-A---CGGG----GTC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188407 17 +    200668 TAC-AA---TAA---T-G---TTGA----TTT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368235 17 -   8254450 TAC-AA---TAG---T-G---Ttga----att
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             45966 17 -     48117 TAC-AA---TAG---T-G---TTGA----ATT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25311 17 -     27822 TAC-AG---TAA---T-A---AGGA----GTG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11877 18 +     27589 TAC-AA---TAA---TTT---GTAA----ATT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362783 17 +    437263 TAC-AG---TAA---T-G---ATGG----ATT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182822 17 +    366855 TGC-AG---TAA---T-G---TTGA----TTT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  31986 17 -     82753 TAC-AG---TAA---T-G---AGGG----ATT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21875 17 -     63510 TAT-GA---TAA---T-G---ATGA----ATT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45212 17 +     47283 TAC-AA---TAA---T-G---TTGA----ATT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               2951 12 -    124358 T----A---CAA---T-G---ATGG----C--
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 I 2
s Mustela_putorius.JH418006.1                             14358263 17 +  14710649 TAC-AA---TAA---T-G---GTGA----ATa
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1025 17 -     27262 T----A---TGA---T-G---ATGGTGA-GTG
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797217 17 +  10118263 TAC-AA---TAA---T-G---TTga----att
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391391 17 +   6019432 TAC-AA---TAA---T-G---Ttga----att
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387430 17 +   4330536 TAC-AA---TAA---T-G---TTga----att
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6217 17 +     18357 TAC-AA---TAA---T-G---TTGA----ATT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nasalis_larvatus.k141_1350636                              32096 17 +     34575 TAC-AG---TAA---T-A---AGGA----GTG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469324 18 -  31847680 TAC-AA---TAA---TTT---GTAA----Att
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235449 17 -   7148211 TAC-AG---TAA---T-G---ATAG----ATT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131151 17 -    149072 GAC-AA---CCA---T-G---TTGA----TTT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56418  9 -    132029 ---------------T-A---AGAA----GTG
i Nomascus_annamensis.k141_1771965                       I 5 C 0
s Nomascus_concolor.k141_735679                              12513  9 -     16345 ---------------T-A---AGAA----GTG
i Nomascus_concolor.k141_735679                          I 5 C 0
s Nomascus_gabriellae.k141_57920                             18402  9 +     22201 ---------------T-A---AGAA----GTG
i Nomascus_gabriellae.k141_57920                         I 5 C 0
s Nomascus_siki_b.tarseq_93                            8416632  9 -  22158432 ---------------T-A---AGAA----GTG
i Nomascus_siki_b.tarseq_93                          I 5 C 0
s Nomascus_siki_a.k141_941534                                  28807  9 -     54323 ---------------T-A---AGAA----GTG
i Nomascus_siki_a.k141_941534                              I 5 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201760 17 +   9404916 TAC-AA---TAA---T-G---ATGA----ATT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059293 17 -  11899542 t----a---caa---C-A---ATGGTGA-GTG
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1455093 18 +   2017862 tac-aa---taa---ttt---gtaa----att
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442382 17 -    630418 TAC-AG---TAA---T-G---ATAG----ATT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22039 17 +    150152 TAC-AG---TAA---T-G---ATgg----att
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8105854 17 +  10937097 TAC-AG---TAA---T-g---atgg----att
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               2843 17 +     11607 TAC-AA---TGA---T-A---ATGG----GTC
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108499 17 - 174332312 t----aCAGTAA---T-T---ATGG----GTG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42710 17 +    559221 TAC-AA---TAA---T-G---ATGA----ATT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26410781 17 -  44047080 TAC-AG---TAA---T-G---AGAG----AGA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11404 17 +     17875 TAC-AG---TAA---T-G---AGAG----AGA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  369 17 +      1186 taC-AG---TAA---T-A---AGGA----gtg
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             16789 18 -     26668 tac-ag---taa---tta---agga----gtg
i Pan_troglodytes.NBAG03003091.1                         I 71 I 20
s Panthera_onca.PanOnc_flattened_line_3271                   28344 18 -    230217 TATCGA---TAA---T-G---ATGA----GCT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465576 18 -  18783137 TATCGA---TAA---T-G---ATGA----GCT
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976177 18 +   8748460 TATCGA---TAA---T-G---ATGA----GCT
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622299 17 +   2937107 TAC-AG---TAA---T-G---AGAG----ATA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246226 17 - 183742232 tac-aG---TAA---T-A---AGGA----gtg
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12511 17 +     21308 TAC-AG---TAA---T-A---AGGA----GTG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295254 17 -  20919399 TAC-AG---TAA---T-A---AGGA----GTG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25151 17 -     27687 TAC-AG---TAA---T-A---AGGA----GTG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1830 17 +     10553 TAC-AG---TAA---T-A---AGGA----GTG
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1790 17 -     10386 TAC-AG---TAA---T-A---AGGA----GTG
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18514 17 +     78924 TAT-GA---TAA---T-G---ATGA----ATT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7409 17 +      9367 T----A---AAACAAT-G---TTGA----GTG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35390 17 -     56120 T----G---CAA---A-A---ATGATGG-GTG
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7375 17 -     63832 TAC-AG---TAA---T-G---ATGG----ATT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5473 17 +     55023 TAC-AG---TAA---T-A---AGGA----GTG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         4995 17 -     89929 TAC-AG---TAA---T-A---AGGA----GTG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5585 17 +     40849 TAC-AG---TAA---T-A---AGGA----GTG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257315 17 +  14605196 tac-aG---TAA---T-A---AGGA----gtg
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7712 17 +     22231 TAC-AG---TAA---T-G---TTGA----ATT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66855 17 +    207309 TAC-AG---TAA---T-A---AGGA----GTG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7950 17 -     25401 TAC-AG---TAA---T-A---AGGA----GTG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33696 17 +     58159 TAC-AG---TAA---T-A---AGGA----GTG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33972 17 +     63561 TAC-AG---TAA---T-A---AGGA----GTG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33727 17 +     51148 TAC-AG---TAA---T-A---AGGA----GTG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558703 17 -   4542175 TAC-AG---TAA---T-A---AGGA----GTG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33711 17 +     51125 TAC-AG---TAA---T-A---AGGA----GTG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4396 17 +     19503 TAC-AG---TAA---T-G---ATGG----ATT
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10136 17 +     39866 TGC-AG---TAA---T-A---AGGA----ATG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5218 17 -      9282 TGC-AG---TAA---T-A---AGGA----ATG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44622 17 -     87950 TGC-AG---TAA---T-A---AGGA----ATG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45016 17 -     88961 TGC-AG---TAA---T-A---AGGA----ATG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9714 17 -     39403 TGC-AG---TAA---T-A---AGGA----ATG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44666 17 +     87928 TGC-AG---TAA---T-A---AGGA----ATG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9713 17 -     60166 TGC-AG---TAA---T-A---AGGA----ATG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16634 17 -     67232 TGC-AG---TAA---T-A---AGGA----ATG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44566 17 -     90634 TGC-AG---TAA---T-A---AGGA----ATG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46033 17 +     89403 TGC-AG---TAA---T-A---AGGA----ATG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182174 17 - 189387572 TAC-AG---TAA---T-A---AGGA----gtg
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196917 17 -   9816681 TAC-AG---TAA---T-A---AGGA----GTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30676 17 +     69807 TAC-AG---TAA---T-A---AGGA----GTG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47857 17 -     80239 TAC-AG---TAA---T-A---AGGA----GTG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2606 17 -     12774 TGC-AG---TAA---T-A---ATAG----ATG
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55485 17 -     66298 tac-aa---aaa---t-g---ttga----ttt
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7872 17 -     18639 TAC-AA---TAA---T-G---ATGA----GTG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844026 17 -  28871421 tat-aa---taa---t-g---ataa----att
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540542 17 -   4952924 tat-aa---taa---t-g---ataa----att
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102566 18 +  38429054 TATCGA---TAA---T-G---AGGA----GTT
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             30043 17 +     91421 TAC-AG---TAA---T-A---AGGA----GTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156594 17 -   7812017 TAC-AG---TAA---T-A---AGGA----GTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10894 17 +     72585 TAC-AG---TAA---T-A---AGGA----GTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4900 17 -     55207 TAC-AG---TAA---T-G---ATAG----ATT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2917956 17 +   3329780 tat-aa---taa---t-g---atga----act
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4501 17 +      7119 TAC-AG---TAA---T-A---AGGA----GTG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125171 17 + 195417433 TAC-AG---TAA---T-A---AGGA----GTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239343 17 -   7961872 TAC-AG---TAA---T-A---AGGA----GTG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78843 17 -    116970 TAC-AA---TAA---T-G---ACAA----ATT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 321 C 0
s Saguinus_bicolor.k141_161125                                9266 17 +     12412 TAC-AG---TAA---T-A---AGGA----GTG
i Saguinus_bicolor.k141_161125                           I 13 C 0
s Saguinus_geoffroyi.k141_356064                               723 17 +      9876 TAC-AG---TAA---T-A---AGGA----GTG
i Saguinus_geoffroyi.k141_356064                         I 13 C 0
s Saguinus_imperator.k141_2710097                            16327 17 -     24931 TAC-AG---TAA---T-A---AGGA----GTG
i Saguinus_imperator.k141_2710097                        I 13 C 0
s Saguinus_inustus.k141_4502137                               1207 17 +      4564 TAC-AG---TAA---T-A---AGGA----GTG
i Saguinus_inustus.k141_4502137                          I 13 C 0
s Saguinus_labiatus.k141_264497                               4012 17 -      7443 TAC-AG---TAA---T-A---AGGA----GTG
i Saguinus_labiatus.k141_264497                          I 13 C 0
s Saguinus_midas.LG03                                       394919 17 - 209938924 TAC-AG---TAA---T-A---AGGA----GTG
i Saguinus_midas.LG03                                    I 13 C 0
s Saguinus_mystax.k141_6319370                                1627 17 +     10149 TAC-AG---TAA---T-A---AGGA----GTG
i Saguinus_mystax.k141_6319370                           I 13 C 0
s Saguinus_oedipus.k141_1368863                                964 17 +     10417 TAC-AG---TAA---T-A---AGGA----GTG
i Saguinus_oedipus.k141_1368863                          I 13 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14351 17 +     16473 TAC-AG---TAA---T-G---AGGG----ATT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111094 17 + 121099817 gac-AG---TAA---T-A---AGGA----gtg
i Saimiri_boliviensis.NW_024100920.1                     I 13 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32664 17 -     47369 GAC-AG---TAA---T-A---AGGA----GTG
i Saimiri_cassiquiarensis.k141_1467335                   I 13 C 0
s Saimiri_macrodon.k141_1173117                              33048 17 -     79414 GAC-AG---TAA---T-A---AGGA----GTG
i Saimiri_macrodon.k141_1173117                          I 13 C 0
s Saimiri_oerstedii.k141_245838                              29739 17 -     34454 GAC-AG---TAA---T-A---AGGA----GTG
i Saimiri_oerstedii.k141_245838                          I 13 C 0
s Saimiri_sciureus.k141_1467173                              17141 17 -     22428 GAC-AG---TAA---T-A---AGGA----GTG
i Saimiri_sciureus.k141_1467173                          I 13 C 0
s Saimiri_ustus.k141_360372                                  32294 17 -     47109 GAC-AG---TAA---T-A---AGGA----GTG
i Saimiri_ustus.k141_360372                              I 13 C 0
s Sapajus_apella.ctg103                                     240318 17 +   5703754 TAC-AG---TAA---T-A---AGGA----GTG
i Sapajus_apella.ctg103                                  I 13 C 0
s Sapajus_macrocephalus.k141_796559                           9909 17 +     21866 TAC-AG---TAA---T-A---AGGA----GTG
i Sapajus_macrocephalus.k141_796559                      I 13 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122388 17 +    313613 TAC-AA---TAA---T-G---ATGA----ATT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1482 17 +     11297 TAC-AG---TAA---T-A---AGGA----GTG
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31875 17 +     58920 TAC-AG---TAA---T-A---AGGA----GTG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18373 17 -     45317 TAC-AG---TAA---T-A---AGGA----GTG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26031 17 -     42441 TAC-AG---TAA---T-A---AGGA----GTG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28707 17 -     29113 TAC-AG---TAA---T-A---AGGA----GTG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31784 17 -     48123 TAC-AG---TAA---T-A---AGGA----GTG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867136  6 -   1910179 TAC-AA---T----------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 8
s Sorex_araneus.JH798187.1                                 4674388 17 +  18376816 TAC-AA---TAG---T-G---ATGA----ATT
i Sorex_araneus.JH798187.1                               I 30 C 0
s Spermophilus_dauricus.KZ294078.1                         1871968 17 +   3870691 t----a---catCGGT-G---ATAA----CTG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16097 17 -     97271 TGT-AA---TAA---T-G---ACGA----ATT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128724 17 +    196729 TAT-GA---TAA---T-G---ATGA----ATT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6647993 17 +  69701581 TCC-AC---TAA---T-G---ATgg----att
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393889  9 +   1523678 ---------------T-A---AGAA----GTG
i Symphalangus_syndactylus.tarseq_199                    I 5 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17429 17 +     22964 TAC-AG---TAA---T-G---TTGA----ATT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194826 17 +    199430 TAC-AA---TAG---T-G---ATGG----GTA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108806 17 -    539355 TAC-AA---TAG---T-G---ATGG----GTA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4435 17 +      9917 TAC-AA---TAA---T-G---ATGG----ATG
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11231 17 +     20590 TAC-AA---TAA---T-G---ATGG----ATG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356035 17 - 186847797 tac-aG---TAA---T-A---AGGA----gtg
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27668 17 -     33621 T----A---CAA---C-A---CTGAT-AGCTA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22406 16 -     31044 TGC-AA---CGA---T-G---ATGG----GC-
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483736 17 -    610378 TAT-AA---TAA---T-G---TTGA----TTT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23783 17 +     26378 TAC-AG---TAA---T-A---AGGA----GTG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36582 17 -     78344 TAC-AG---TAA---T-A---AGGA----GTG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23108 17 +     25722 TAC-AG---TAA---T-A---AGGA----GTG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31538 17 -     62838 TAC-AG---TAA---T-A---AGGA----GTG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31529 17 +     46913 TAC-AG---TAA---T-A---AGGA----GTG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12266 17 -     28527 TAC-AG---TAA---T-A---AGGA----GTG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33469 17 -     64340 TAC-AG---TAA---T-A---AGGA----GTG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31507 17 -     63452 TAC-AG---TAA---T-A---AGGA----GTG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12958 17 +     22490 TAC-AG---TAA---T-A---AGGA----GTG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          924 17 +      9911 TAC-AG---TAA---T-A---AGGA----GTG
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          719 17 -     33539 TAC-AG---TAA---T-A---AGGA----GTG
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258478 17 -   6242583 TAC-AG---TAA---T-A---AGGA----GTG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4497 17 +     19340 TAC-AG---TAA---T-A---AGGA----GTG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177610 17 -    200418 TAC-AG---TAA---T-G---ATGG----ATT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485414 17 -  10818551 TGC-AA---TAA---T-A---ATGC----Gtc
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839379 17 -   4065304 TGC-AA---TAA---C-A---ATGA----Gta
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13473 16 -     70247 TGC-AA---TAA---C-G---AAGA----G-A
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17368978 17 -  33153633 TAC-AG---TAA---T-G---ATGG----ATT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7173 17 -     21056 TGT-AA---TAA---T-G---GTGA----ATT
i Uropsilus_gracilis.UroGra_scaffold_46687               I 14 C 0
s Ursus_maritimus.KK499267.1                                185305  9 +   5085361 ---------------T-G---ACAA----ATT
i Ursus_maritimus.KK499267.1                             I 5 C 0
s Vicugna_pacos.KN270157.1                                   79505 17 +   5488506 TAT-AG---TAA---T-G---ATGG----ATT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108654 17 -    112863 TAC-AA---TAA---T-G---ATGA----ATT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        177839 17 -    224448 T----A---CAACAGT-G---ATAA----CTG
i Xerus_inauris.XerIna_scaffold_2302                     I 6 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32299 18 -     86975 TAC-AA---TAA---TTT---GTAA----ATT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639             939 17 +      3447 TAC-AG---TAA---T-G---ATGG----ATT
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Nannospalax_galili.KL204047.1                             950156 17 +   3037898 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Zapus_hudsonius.ZapHud_scaffold_11398                       4514  0 -     63895 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    52716 15 +     77746 I
e Rattus_norvegicus.chr16                                 37025869 17 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            40662 17 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         250931 17 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    7712 17 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    97170 17 -    140218 I
e Mus_spretus.CM004101.1                                  39500209 17 + 130317789 I
e Mus_pahari.LT608297.1                                   58219252 17 +  89631738 I
e Mus_musculus.chr8                                       41691290 17 + 129401213 I
e Mus_caroli.LT608237.1                                   35597750 17 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15966555 17 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53128 17 -    140813 I
e Jaculus_jaculus.JH725527.1                               1242770 296 +   9596543 I
e Ellobius_talpinus.LOJH01026522.1                           17069 17 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          35140 17 +    110024 I
e Cricetulus_griseus.LT883664.1                          213118941 17 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 47428 16 -     83289 I
e Allactaga_bullata.AllBul_scaffold_20030                    21217 300 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28733 17 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9856 1 +     36723 T
s Acinonyx_jubatus.LLWD01001279.1                           816358 1 +   1699592 T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418860 1 +  29979442 T
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            218860 1 +    347723 g
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50801 1 +     53615 T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2828 1 +     13857 T
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19383 1 -     21945 T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21068 1 +     32033 T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74330 1 -     84148 T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46575 1 -     78289 T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46000 1 +     55831 T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44462 1 -     64179 T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1570 1 -      3959 T
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43087 1 +     45454 T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48736 1 +     70886 T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10906 1 +     30854 T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35042 1 +     42133 T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592057 1 +   2318259 T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180464 1 -    412891 T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53213 1 -     68529 T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3247 1 +     17741 T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3872 1 -     15923 T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674154 1 +   5030052 t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4148 1 -     16391 T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3707 1 -     17186 T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27313 1 -     32367 T
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  8978 1 -     15198 T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276803 1 +  21539123 T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12969 1 +     48076 T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8107 1 -     28759 T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35660 1 +     44353 T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51031 1 -     71267 T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25087 1 -     33135 T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966718 1 -  23207421 T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3219 1 -     25979 T
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93046 1 +    124022 T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36246 1 +    288883 T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423386 1 -  48749331 t
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      768987 1 +   1948126 t
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559532 1 -  45695690 t
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536213 1 -   4408762 T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9894 1 +     28062 T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45185 1 -     91139 T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22712 1 +     95584 T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22625 1 +    119600 T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12235 1 +     18648 T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11743 1 -     13885 T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3842 1 -      8861 T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456234 1 + 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3756 1 +      8664 T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7634130 1 +  17673402 T
i Camelus_bactrianus.KN276810.1                          C 0 I 631
s Camelus_dromedarius.KN272107.1                           4668431 1 +   7040546 T
i Camelus_dromedarius.KN272107.1                         C 0 I 631
s Camelus_ferus.KB017975.1                                 1212119 1 +   1652518 T
i Camelus_ferus.KB017975.1                               C 0 I 641
s CanFam4.chr16                                           42508805 1 +  60362399 T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12440 1 -     23171 T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225781 1 +   9314153 T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41618918 1 +  59632846 T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110499 1 -  63665305 T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416061 1 -  46296322 T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598058 1 +  44709034 T
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    1972 1 -     20114 T
i Capromys_pilorides.CapPil_scaffold_26391               I 2 C 0
s Carlito_syrichta.NW_007259797.1                           274261 1 +    496798 t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               3852 1 +      9923 T
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31550 1 -     39886 T
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83058 1 -    217609 T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4999952 1 +  23392119 t
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5003393 1 +  23407841 t
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          281 1 -    143979 T
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_niveiventris.k141_592277                           7155 1 -     12580 T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45211 1 +     53515 T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  375944 1 -  26074798 T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10015 1 -     34880 T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69111 1 -     89041 T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         1924 1 -     76265 T
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495385 1 -  27778364 t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22218 1 +     27315 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143884 1 -   4669795 t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47623 1 +     47900 T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3056 1 -     14410 T
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47438 1 -    148725 T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29716 1 -     40656 T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9675 1 +     20796 T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14788 1 -     17524 T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30521 1 -     34525 T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14299 1 -     25376 T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366888 1 -  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272613 1 +  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34980 1 -     45857 T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29881 1 -     32606 T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6041 1 +      8499 T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28441 1 +     70610 T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25403 1 +     36323 T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15325 1 -     19938 T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10980 1 -     32913 T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21393 1 -     40346 T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21647 1 +    216457 T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21437 1 +     39636 T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33386 1 -     52013 T
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44526 1 -    112038 T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10076 1 +     34062 T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346303 1 +  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12842 1 -     44032 T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307689 1 - 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2004 1 +     10270 T
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            609481 1 -    839153 t
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2227 1 -      4087 T
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412097 1 -   2368649 t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381979 1 - 200372422 T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5531 1 -     84244 T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810575 1 +  53390261 T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6131 1 -      8242 A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12384 1 +     12657 T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7741 1 +     87169 T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650015 1 -   1526836 T
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22651 1 +     50838 T
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12143 1 +     36344 T
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31584 1 +     75252 T
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2112683 1 -   2246927 T
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635122 1 -  35494412 T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11868844 1 -  20541912 T
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667656 1 -   1390856 t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142458 1 -    198055 T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955217 1 -  37912305 T
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                    829 1 +     14058 T
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 12716 1 +     14636 T
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62858342 1 - 111700974 t
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9493 1 +     19438 T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       245847 1 -    607251 t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925392 1 +  41312741 g
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582613 1 +  14770903 t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045122 1 -   4378816 t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379052 1 +  39960074 t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415034 1 -    498745 t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671344 1 +   7059049 T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265831 1 +  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74332 1 -    133382 T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2047 1 +     25849 T
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250360 1 - 206538554 T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120316 1 - 205367284 T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                   958 1 +     25330 T
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2925947 1 -   3816255 t
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                4919 1 -     28519 T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2105 1 +    660261 t
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            4938 1 -      6791 T
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                607 1 -      2763 T
i Gorilla_beringei.k141_3218903                          I 17 C 0
s Gorilla_gorilla.LT578341.1                                259027 1 - 186649187 t
i Gorilla_gorilla.LT578341.1                             I 17 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    6853 1 -     78134 T
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34143 1 -    327341 T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15772 1 +     48891 T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938386 1 -  22651954 T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6091 1 +      8654 T
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11159 1 -     36432 T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556203 1 -   1711038 t
i Hipposideros_armiger.JXIK01000431.1                    I 3 C 0
s Hipposideros_galeritus.HipGal_scaffold_363447                572 1 +       852 T
i Hipposideros_galeritus.HipGal_scaffold_363447          I 3 C 0
s Hoolock_leuconedys.ctg274                                    145492 1 -    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73778 1 +     83186 T
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75331 1 +    143317 T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               8539 1 +     12352 T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15726 1 +     55766 T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055254 1 + 191637585 T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804132 1 +  11177569 T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11205 1 -    135385 T
i Hystrix_cristata.HysCri_scaffold_5660                  I 41 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390422 1 +   7955117 G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13226 1 -     16823 T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75064 1 -     97402 T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45353 1 +    110728 T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1300 1 -     25587 T
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                         791 1 -     23187 T
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1104 1 -     14280 T
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         746 1 +      3713 T
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      936 1 +      8855 T
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5738 1 -     13645 T
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816662 1 -   3914936 t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     21855 1 +     24238 T
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344408 1 +    662738 T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336766 1 -   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39087823 1 +  43346337 t
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618073 1 +  59628241 T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48158 1 -     61512 T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375820 1 -  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28088 1 +     30207 T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2926 1 -      5035 T
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28041 1 +     30527 T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39217 1 -     50087 T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48962 1 +     51645 T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418164 1 - 187317192 t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402395 1 +  25927173 t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51566 1 -     62418 T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4097 1 +     14901 T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48039 1 +     59329 T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273946 1 +    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2578 1 -      5049 T
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5744 1 +     17132 T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226427 1 -    270270 T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325234 1 +  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360065 1 -    752769 T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676707 1 -    737560 t
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             224004 1 +    317179 T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504622 1 +  40650429 g
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       153826 1 +    207569 T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29405 1 -     74585 G
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90692 1 +     93471 T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12335 1 +     17804 T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12835 1 -     12984 T
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21154 1 -     26561 T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49517 1 +    145209 C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188424 1 +    200668 T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368252 1 -   8254450 t
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             45983 1 -     48117 T
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25328 1 -     27822 T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11895 1 +     27589 T
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362800 1 +    437263 T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182839 1 +    366855 T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32003 1 -     82753 T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21892 1 -     63510 T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45229 1 +     47283 C
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14358280 1 +  14710649 g
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1042 1 -     27262 T
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797234 1 +  10118263 t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391408 1 +   6019432 t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387447 1 +   4330536 t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6234 1 +     18357 T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nasalis_larvatus.k141_1350636                              32113 1 +     34575 T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469342 1 -  31847680 t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235466 1 -   7148211 T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131168 1 -    149072 T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56427 1 -    132029 T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12522 1 -     16345 T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18411 1 +     22201 T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416641 1 -  22158432 T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28816 1 -     54323 T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201777 1 +   9404916 T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059310 1 -  11899542 T
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1455111 1 +   2017862 t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442399 1 -    630418 T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22056 1 +    150152 t
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8105871 1 +  10937097 t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               2860 1 +     11607 A
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108516 1 - 174332312 T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42727 1 +    559221 T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26410798 1 -  44047080 T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11421 1 +     17875 T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  386 1 +      1186 t
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1477006 1 - 189151597 t
i Pan_troglodytes.CM009242.2                             I 17 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   28362 1 -    230217 T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465594 1 -  18783137 T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976195 1 +   8748460 T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622316 1 +   2937107 T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246243 1 - 183742232 t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12528 1 +     21308 T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295271 1 -  20919399 T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25168 1 -     27687 T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1847 1 +     10553 T
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1807 1 -     10386 T
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18531 1 +     78924 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7426 1 +      9367 T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35407 1 -     56120 T
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7392 1 -     63832 T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5490 1 +     55023 T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5012 1 -     89929 T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5602 1 +     40849 T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257332 1 +  14605196 t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7729 1 +     22231 T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66872 1 +    207309 T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7967 1 -     25401 T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33713 1 +     58159 T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33989 1 +     63561 T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33744 1 +     51148 T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558720 1 -   4542175 T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33728 1 +     51125 T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4413 1 +     19503 T
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10153 1 +     39866 T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5235 1 -      9282 T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44639 1 -     87950 T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45033 1 -     88961 T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9731 1 -     39403 T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44683 1 +     87928 T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9730 1 -     60166 T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16651 1 -     67232 T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44583 1 -     90634 T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46050 1 +     89403 T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182191 1 - 189387572 t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196934 1 -   9816681 T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30693 1 +     69807 T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47874 1 -     80239 T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2623 1 -     12774 T
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55502 1 -     66298 t
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7889 1 -     18639 G
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844043 1 -  28871421 c
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540559 1 -   4952924 t
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102584 1 +  38429054 T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             30060 1 +     91421 T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156611 1 -   7812017 T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10911 1 +     72585 T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4917 1 -     55207 T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2917973 1 +   3329780 t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4518 1 +      7119 T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125188 1 + 195417433 T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239360 1 -   7961872 T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78860 1 -    116970 T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9283 1 +     12412 T
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               740 1 +      9876 T
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16344 1 -     24931 T
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1224 1 +      4564 T
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4029 1 -      7443 T
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394936 1 - 209938924 T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1644 1 +     10149 T
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                981 1 +     10417 T
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14368 1 +     16473 T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111111 1 + 121099817 t
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32681 1 -     47369 T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33065 1 -     79414 T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29756 1 -     34454 T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17158 1 -     22428 T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32311 1 -     47109 T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240335 1 +   5703754 T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9926 1 +     21866 T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122405 1 +    313613 T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1499 1 +     11297 T
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31892 1 +     58920 T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18390 1 -     45317 T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26048 1 -     42441 T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28724 1 -     29113 T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31801 1 -     48123 T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867150 1 -   1910179 T
i Solenodon_paradoxus.SolPar_flattened_line_126          I 8 C 0
s Sorex_araneus.JH798187.1                                 4674405 1 +  18376816 T
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1871985 1 +   3870691 g
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16114 1 -     97271 G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128741 1 +    196729 T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6648010 1 +  69701581 t
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393898 1 +   1523678 T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17446 1 +     22964 T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194843 1 +    199430 T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108823 1 -    539355 T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4452 1 +      9917 T
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11248 1 +     20590 T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356052 1 - 186847797 t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27685 1 -     33621 T
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483753 1 -    610378 T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23800 1 +     26378 T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36599 1 -     78344 T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23125 1 +     25722 T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31555 1 -     62838 T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31546 1 +     46913 T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12283 1 -     28527 T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33486 1 -     64340 T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31524 1 -     63452 T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12975 1 +     22490 T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          941 1 +      9911 T
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          736 1 -     33539 T
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258495 1 -   6242583 T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4514 1 +     19340 T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177627 1 -    200418 T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485431 1 -  10818551 t
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839396 1 -   4065304 t
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13489 1 -     70247 T
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17368995 1 -  33153633 T
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7190 1 -     21056 G
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185314 1 +   5085361 T
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   79522 1 +   5488506 t
i Vicugna_pacos.KN270157.1                               C 0 I 613
s Vulpes_lagopus.VulLag_flattened_line_12041                108671 1 -    112863 T
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        177856 1 -    224448 G
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32317 1 -     86975 T
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639             956 1 +      3447 T
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Nannospalax_galili.KL204047.1                             950156 17 +   3037898 I
e Elephantulus_edwardii.JH947257.1                         9113395 0 -  10337057 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Tolypeutes_matacus.TolMat_scaffold_31955                   22422 0 -     31044 C
e Zapus_hudsonius.ZapHud_scaffold_11398                       4514 0 -     63895 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    52716 15 +     77746 I
e Rattus_norvegicus.chr16                                 37025869 17 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            40662 17 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         250931 17 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    7712 17 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    97170 17 -    140218 I
e Muscardinus_avellanarius.MusAve_scaffold_5560               2963 2 -    124358 I
e Mus_spretus.CM004101.1                                  39500209 17 + 130317789 I
e Mus_pahari.LT608297.1                                   58219252 17 +  89631738 I
e Mus_musculus.chr8                                       41691290 17 + 129401213 I
e Mus_caroli.LT608237.1                                   35597750 17 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15966555 17 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53128 17 -    140813 I
e Jaculus_jaculus.JH725527.1                               1242770 296 +   9596543 I
e Ellobius_talpinus.LOJH01026522.1                           17069 17 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          35140 17 +    110024 I
e Cricetulus_griseus.LT883664.1                          213118941 17 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 47428 16 -     83289 I
e Allactaga_bullata.AllBul_scaffold_20030                    21217 300 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28733 17 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9857  7 +     36723 GA-----T---T-------CCT
s Acinonyx_jubatus.LLWD01001279.1                           816359  1 +   1699592 G---------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 4
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418861  5 +  29979442 GA-----T---T-------C--
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 4
s Ailurus_fulgens.LNAC01001112.1                            218861  5 +    347723 ga-----t---t-------c--
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50802  7 +     53615 GA-----T---T-------CCT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2829  7 +     13857 GA-----T---T-------CCT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19384  7 -     21945 GA-----T---T-------CCT
i Allochrocebus_preussi.k141_1993939                     C 0 I 1
s Allochrocebus_solatus.k141_3554717                         21069  7 +     32033 GA-----T---T-------CCT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74331  6 -     84148 GA-----T---T-------CC-
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46576  6 -     78289 GA-----T---T-------CC-
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46001  6 +     55831 GA-----T---T-------CC-
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44463  6 -     64179 GA-----T---T-------CC-
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1571  6 -      3959 GA-----T---T-------CC-
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43088  6 +     45454 GA-----T---C-------CC-
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48737  6 +     70886 GA-----T---T-------CC-
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10907  6 +     30854 GA-----T---T-------CC-
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35043  6 +     42133 GA-----T---T-------CC-
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592058  5 +   2318259 GA-----T---T-------C--
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180465  5 -    412891 GA-----C---C-------C--
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53214  5 -     68529 GA-----T---T-------C--
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3248  6 +     17741 GA-----T---T-------CC-
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3873  6 -     15923 GA-----T---T-------CC-
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674155  6 +   5030052 ga-----t---t-------cc-
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4149  6 -     16391 GA-----T---T-------CC-
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3708  6 -     17186 GA-----T---T-------CC-
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27314 10 -     32367 GTCCATCC---T-------C--
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  8979  5 -     15198 GG-----C---C-------C--
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276804  6 +  21539123 GA-----T---T-------CC-
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12970  6 +     48076 GA-----T---T-------CC-
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8108  6 -     28759 GA-----T---T-------CC-
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35661  6 +     44353 GA-----T---T-------CC-
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51032  6 -     71267 GA-----T---T-------CC-
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25088  6 -     33135 GA-----T---T-------CC-
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966719  5 -  23207421 GA-----T---T-------C--
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3220  5 -     25979 GA-----T---T-------C--
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93047  6 +    124022 GA-----T--TT-------C--
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36247  5 +    288883 GA-----T---T-------C--
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423387  5 -  48749331 ga-----t---t-------c--
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      768988  5 +   1948126 ga-----t---t-------c--
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559533  5 -  45695690 ga-----t---t-------c--
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536214  5 -   4408762 GA-----T---T-------C--
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9895  6 +     28062 GA-----T---T-------CC-
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45186  6 -     91139 GA-----T---T-------CC-
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22713  6 +     95584 GA-----T---T-------CC-
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22626  6 +    119600 GA-----T---T-------CC-
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12236  6 +     18648 GA-----T---T-------CC-
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11744  6 -     13885 GA-----T---T-------CC-
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3843  6 -      8861 GA-----T---T-------CC-
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456235  6 + 189096842 GA-----T---T-------CC-
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3757  6 +      8664 GA-----T---T-------CC-
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7634762  5 +  17673402 ga-----t---t-------c--
i Camelus_bactrianus.KN276810.1                          I 631 C 0
s Camelus_dromedarius.KN272107.1                           4669063  5 +   7040546 ga-----t---t-------c--
i Camelus_dromedarius.KN272107.1                         I 631 C 0
s Camelus_ferus.KB017975.1                                 1212761  5 +   1652518 ga-----t---t-------c--
i Camelus_ferus.KB017975.1                               I 641 C 0
s CanFam4.chr16                                           42508806  5 +  60362399 GA-----T---T-------C--
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12441  5 -     23171 GA-----T---T-------C--
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225782  5 +   9314153 GA-----T---T-------C--
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41618919  5 +  59632846 GA-----T---T-------C--
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110500  5 -  63665305 GA-----T---T-------C--
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416062  5 -  46296322 GA-----T---T-------C--
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598059  5 +  44709034 GA-----T---T-------C--
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    1973 12 -     20114 GA-----C---TTTTTTTTT--
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274262  5 +    496798 ga-----t---t-------c--
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               3853  5 +      9923 GA-----C---C-------C--
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31551  8 -     39886 CA-----CAATT-------T--
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83059  5 -    217609 GA-----C---T-------C--
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4999953  5 +  23392119 ca-----t---t-------t--
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5003394  5 +  23407841 ca-----t---t-------t--
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          282  5 -    143979 CA-----T---T-------T--
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_niveiventris.k141_592277                           7156  6 -     12580 GA-----T---T-------CC-
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45212  6 +     53515 GA-----T---T-------CC-
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  375945  6 -  26074798 GA-----T---T-------CC-
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10016  6 -     34880 GA-----T---T-------CC-
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69112  6 -     89041 GA-----T---T-------CC-
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         1925  5 -     76265 GA-----T---T-------C--
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495386  5 -  27778364 ga-----t---t-------c--
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22219  5 +     27315 GA-----T---T-------C--
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143885  7 -   4669795 ga-----t---t-------cct
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47624  7 +     47900 GA-----T---T-------CCT
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3057  7 -     14410 GA-----T---T-------CCT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47439  7 -    148725 GA-----T---T-------CCT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29717  7 -     40656 GA-----T---T-------CCT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9676  7 +     20796 GA-----T---T-------CCT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14789  7 -     17524 GA-----T---T-------CCT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30522  7 -     34525 GA-----T---T-------CCT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14300  7 -     25376 GA-----T---T-------CCT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366889  7 -  39242232 GA-----T---T-------CCT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272614  7 +  21565898 GA-----T---T-------CCT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34981  7 -     45857 GA-----T---T-------CCT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29882  7 -     32606 GA-----T---T-------CCT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6042  7 +      8499 GA-----T---T-------CCT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28442  7 +     70610 GA-----T---T-------CCT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25404  7 +     36323 GA-----T---T-------CCT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15326  5 -     19938 GG-----T---T-------C--
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10981  6 -     32913 GA-----T---T-------CC-
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21394  6 -     40346 GA-----T---T-------CC-
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21648  6 +    216457 GA-----T---T-------CC-
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21438  6 +     39636 GA-----T---T-------CC-
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33387  6 -     52013 GA-----T---T-------CC-
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44527  6 -    112038 GA-----T---T-------CC-
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10077  6 +     34062 GA-----T---T-------CC-
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346304  7 +  18827391 GA-----T---T-------CCT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12843  7 -     44032 GA-----T---T-------CCT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307690  7 - 135778131 ga-----t---t-------cct
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2005  5 +     10270 GA-----T---T-------T--
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            609482  5 -    839153 ga-----t---t-------t--
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2228  5 -      4087 GG-----T---T-------C--
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412098  7 -   2368649 ga-----t---t-------cct
i Colobus_angolensis.KN981557.1                          C 0 I 1
s Colobus_guereza.LG01                                      381980  7 - 200372422 GA-----T---T-------CCT
i Colobus_guereza.LG01                                   C 0 I 1
s Colobus_polykomos.k141_906115                               5532  7 -     84244 GG-----T---T-------CCT
i Colobus_polykomos.k141_906115                          C 0 I 1
s Condylura_cristata.JH655891.1                           35810576  5 +  53390261 GA-----C---T-------C--
i Condylura_cristata.JH655891.1                          C 0 I 6
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6132  5 -      8242 GA-----T---T-------T--
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12385  5 +     12657 GA-----T---T-------C--
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7742  5 +     87169 GA-----T---T-------C--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 4
s Ctenodactylus_gundi.CteGun_scaffold_65                    650016  5 -   1526836 GA-----C---T-------T--
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22652  5 +     50838 GA-----C---T-------C--
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12144  5 +     36344 TG-----C---T-------T--
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31585  5 +     75252 CA-----T---T-------T--
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2112684  5 -   2246927 GA-----T---T-------G--
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635123  5 -  35494412 GA-----T---T-------C--
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11868845  5 -  20541912 ga-----t---c-------c--
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667657  5 -   1390856 ga-----t---t-------c--
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142459  5 -    198055 GA-----T---T-------C--
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955218  5 -  37912305 AA-----c---t-------t--
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                    830  5 +     14058 AA-----C---T-------T--
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 12717  5 +     14636 CA-----T---T-------T--
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62858343  5 - 111700974 ag-----t---t-------c--
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9494  5 +     19438 GA-----T---T-------C--
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       245848  5 -    607251 ga-----t---t-------c--
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9113395  2 -  10337057 -----------t-------a--
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925393  5 +  41312741 ga-----t---t-------c--
i Enhydra_lutris.KZ291758.1                              C 0 I 4
s Eptesicus_fuscus.JH977646.1                             12582614  5 +  14770903 ga-----t---t-------a--
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045123  5 -   4378816 ga-----t---t-------c--
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379053  5 +  39960074 ga-----t---t-------c--
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415035  5 -    498745 ga-----t---t-------c--
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671345  5 +   7059049 GA-----T---G-------C--
i Erinaceus_europaeus.JH835339.1                         C 0 I 4
s Erythrocebus_patas.Contig38                               265832  7 +  21539334 GA-----T---T-------CCT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74333  5 -    133382 GA-----T---T-------C--
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2048  5 +     25849 GA-----T---T-------C--
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250361  1 - 206538554 G---------------------
i Felis_catus.CM001381.2                                 C 0 I 4
s Felis_catus_fca126.CM031415.1                          185120317  1 - 205367284 G---------------------
i Felis_catus_fca126.CM031415.1                          C 0 I 4
s Felis_nigripes.FelNig_flattened_line_44075                   959  1 +     25330 G---------------------
i Felis_nigripes.FelNig_flattened_line_44075             C 0 I 4
s Fukomys_damarensis.KN121974.1                            2925948  5 -   3816255 ga-----c---t-------c--
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                4920  5 -     28519 GA-----T---T-------C--
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2106  5 +    660261 ga-----t---t-------c--
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            4939  5 -      6791 GA-----C---T-------T--
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                608  7 -      2763 GA-----T---T-------CCT
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                259028  7 - 186649187 ga-----t---t-------cct
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    6854  5 -     78134 GA-----C---T-------T--
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34144  5 -    327341 GA-----T---T-------C--
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 4
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15773  5 +     48891 GA-----T---T-------C--
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938387  5 -  22651954 GA-----C---T-------C--
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6092  5 +      8654 GA-----T---T-------C--
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11160  5 -     36432 AA-----T---T-------C--
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556204  5 -   1711038 ga-----t---t-------c--
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_363447                573  5 +       852 GA-----T---T-------C--
i Hipposideros_galeritus.HipGal_scaffold_363447          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145493  7 -    630532 GA-----T---T-------CCT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73779  5 +     83186 GA-----T---G-------C--
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75332  5 +    143317 CA-----T---T-------T--
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               8540  7 +     12352 GA-----T---T-------CCT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15727  7 +     55766 GA-----T---T-------CCT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055255  7 + 191637585 GA-----T---T-------CCT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804133  7 +  11177569 GA-----T---T-------CCT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11206  5 -    135385 AT-----T---T-------T--
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390423  5 +   7955117 Aa-----c---t-------g--
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13227  5 -     16823 GA-----T---T-------C--
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75065  5 -     97402 GA-----T---T-------C--
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45354  6 +    110728 GA-----T---T-------CC-
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1301  5 -     25587 GA-----T---G-------A--
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                         792  6 -     23187 GA-----T---T-------TC-
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1105  6 -     14280 GA-----T---T-------TC-
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         747  6 +      3713 GG-----T---T-------TC-
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      937  6 +      8855 GA-----T---T-------CC-
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5739  6 -     13645 GA-----T---T-------CC-
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816663  5 -   3914936 ga-----t---t-------c--
i Leptonychotes_weddellii.KB714746.1                     C 0 I 4
s Lepus_americanus.LepAme_scaffold_56121                     21856  5 +     24238 GA-----T---T-------C--
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344409  5 +    662738 GA-----T---T-------C--
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336767  7 -   1826925 GA-----T---T-------CCT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39087824  5 +  43346337 gg-----c---t-------c--
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618074  5 +  59628241 GA-----T---T-------C--
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48159  7 -     61512 GA-----T---T-------CCT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375821  7 -  60120075 GA-----T---T-------CCT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28089  7 +     30207 GA-----T---T-------CCT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2927  7 -      5035 GA-----T---T-------CCT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28042  7 +     30527 GA-----T---T-------CCT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39218  7 -     50087 GA-----T---T-------CCT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48963  7 +     51645 GA-----T---T-------CCT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418165  7 - 187317192 ga-----t---t-------cct
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402396  7 +  25927173 ga-----t---t-------cct
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51567  7 -     62418 GA-----T---T-------CCT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4098  7 +     14901 GA-----T---T-------CCT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48040  7 +     59329 GA-----T---T-------CCT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273947  7 +    668171 GA-----T---T-------CCT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2579  7 -      5049 GA-----T---T-------CCT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5745  7 +     17132 GA-----T---T-------CCT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226428  5 -    270270 GA-----T---T-------C--
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325235  7 +  24302211 GA-----T---T-------CCT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360066  7 -    752769 GA-----T---T-------CCT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676708  5 -    737560 ga-----t---t-------c--
i Manis_javanica.JSZB01003497.1                          C 0 I 4
s Manis_pentadactyla.KN006162.1                             224005  5 +    317179 GA-----T---T-------C--
i Manis_pentadactyla.KN006162.1                          C 0 I 4
s Marmota_marmota.CZRN01000018.1                           7504623  5 +  40650429 aa-----c---t-------c--
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       153827  5 +    207569 GA-----T---T-------C--
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29406  5 -     74585 GA-----T---T-------C--
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 4
s Mesoplodon_bidens.MesBid_scaffold_6114                     90693  5 +     93471 GA-----T---T-------C--
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12336  6 +     17804 GA-----T---T-------CC-
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12836  6 -     12984 GA-----T---T-------CC-
i Mico_humeralifer.k141_1180625                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21155  6 -     26561 GA-----T---T-------CC-
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49518  5 +    145209 CG-----T---T-------C--
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188425  5 +    200668 GA-----T---C-------C--
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368253  5 -   8254450 ga-----t---t-------c--
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             45984  5 -     48117 GA-----T---T-------C--
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25329  7 -     27822 GA-----T---T-------CCT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11896  5 +     27589 GA-----T---T-------C--
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 4
s Monodon_monoceros.MonMon_M_scaffold_103                   362801  5 +    437263 GA-----T---T-------T--
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182840  5 +    366855 GA-----T---T-------C--
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32004  5 -     82753 GA-----T---T-------C--
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21893  5 -     63510 GA-----T---T-------C--
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 4
s Murina_feae.MurFea_scaffold_17764                          45230  5 +     47283 GA-----T---T-------A--
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mustela_putorius.JH418006.1                             14358281  5 +  14710649 ga-----t---t-------c--
i Mustela_putorius.JH418006.1                            C 0 I 4
s Myocastor_coypus.MyoCoy_scaffold_57531                      1043  5 -     27262 GA-----C---T-------C--
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797235  5 +  10118263 ga-----t---t-------a--
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391409  5 +   6019432 ga-----t---t-------a--
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387448  5 +   4330536 ga-----t---t-------a--
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6235  5 +     18357 GA-----T---T-------A--
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nasalis_larvatus.k141_1350636                              32114  7 +     34575 GA-----T---T-------CCT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469343  5 -  31847680 ga-----t---t-------c--
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 4
s Neophocaena_asiaeorientalis.KZ687982.1                   1235467  5 -   7148211 GA-----T---T-------C--
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131169  5 -    149072 GA-----T---T-------C--
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56428  7 -    132029 GA-----T---T-------CCT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12523  7 -     16345 GA-----T---T-------CCT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18412  7 +     22201 GA-----T---T-------CCT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416642  7 -  22158432 GA-----T---T-------CCT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28817  7 -     54323 GA-----T---T-------CCT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201778  5 +   9404916 GA-----T---T-------C--
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059311  5 -  11899542 GA-----T---T-------C--
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1455112  5 +   2017862 ga-----t---t-------c--
i Odobenus_rosmarus.KB229312.1                           C 0 I 4
s Odocoileus_virginianus.KZ100018.1                         442400  5 -    630418 GA-----T---T-------C--
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22057  5 +    150152 ga-----t---t-------c--
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8105872  5 +  10937097 ga-----t---t-------t--
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               2861  5 +     11607 GG-----T---T-------C--
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108517  5 - 174332312 Ga-----t---t-------c--
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42728  5 +    559221 GA-----T---T-------C--
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26410799  5 -  44047080 GA-----T---T-------C--
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11422  5 +     17875 GA-----T---T-------C--
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  387  7 +      1186 ga-----t---t-------cct
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1477007  7 - 189151597 ga-----t---t-------cct
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   28363  5 -    230217 GT-----T---T-------G--
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 4
s Panthera_pardus.KV860321.1                              18465595  5 -  18783137 GT-----T---T-------G--
i Panthera_pardus.KV860321.1                             C 0 I 4
s Panthera_tigris.KE722367.1                               3976196  5 +   8748460 GT-----T---T-------G--
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622317  5 +   2937107 GA-----T---T-------C--
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246244  7 - 183742232 ga-----t---t-------cct
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12529  7 +     21308 GA-----T---T-------CCT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295272  7 -  20919399 GA-----T---T-------CCT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25169  7 -     27687 GA-----T---T-------CCT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1848  7 +     10553 GA-----T---T-------CCT
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1808  7 -     10386 GA-----T---T-------CCT
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18532  5 +     78924 GA-----T---T-------C--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 4
s Perognathus_longimembris.PerPac_flattened_line_89005        7427  5 +      9367 AA-----C---T-------T--
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35408  5 -     56120 GA-----T---G-------T--
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 1
s Phocoena_phocoena.PhoPho_flattened_line_24159               7393  5 -     63832 GA-----T---T-------C--
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5491  7 +     55023 GA-----T---T-------CCT
i Piliocolobus_badius.k141_2704958                       C 0 I 1
s Piliocolobus_gordonorum.k141_381342                         5013  7 -     89929 GA-----T---T-------CCT
i Piliocolobus_gordonorum.k141_381342                    C 0 I 2
s Piliocolobus_kirkii.k141_1310104                            5603  7 +     40849 GA-----T---T-------CCT
i Piliocolobus_kirkii.k141_1310104                       C 0 I 2
s Piliocolobus_tephrosceles.PDMG02000141.1                  257333  7 +  14605196 ga-----t---t-------cct
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7730  5 +     22231 GA-----T---T-------A--
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66873  6 +    207309 GA-----T---T-------CC-
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7968  6 -     25401 GA-----T---T-------CC-
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33714  6 +     58159 GA-----T---T-------CC-
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33990  6 +     63561 GA-----T---T-------CC-
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33745  6 +     51148 GA-----T---T-------CC-
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558721  6 -   4542175 GA-----T---T-------CC-
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33729  6 +     51125 GA-----T---T-------CC-
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4414  5 +     19503 GA-----T---T-------A--
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10154  6 +     39866 GA-----T---T-------TC-
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5236  6 -      9282 GA-----T---T-------TC-
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44640  6 -     87950 GA-----T---T-------TC-
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45034  6 -     88961 GA-----T---T-------TC-
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9732  6 -     39403 GA-----T---T-------TC-
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44684  6 +     87928 GA-----T---T-------TC-
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9731  6 -     60166 GA-----T---T-------TC-
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16652  6 -     67232 GA-----T---T-------TC-
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44584  6 -     90634 GA-----T---T-------TC-
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46051  6 +     89403 GA-----T---T-------TC-
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182192  7 - 189387572 ga-----t---t-------cct
i Pongo_abelii.CM009266.2                                C 0 I 1
s Pongo_pygmaeus.ctg66                                      196935  7 -   9816681 GA-----T---T-------CCT
i Pongo_pygmaeus.ctg66                                   C 0 I 1
s Presbytis_comata.k141_1230337                              30694  7 +     69807 GA-----T---T-------CCT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47875  7 -     80239 GA-----T---T-------CCT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2624  5 -     12774 GA-----T---T-------C--
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55503  5 -     66298 ga-----t---t-------c--
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7890  5 -     18639 GA-----T---T-------C--
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 4
s Pteropus_alecto.KB030862.1                               5844044  5 -  28871421 gA-----T---T-------C--
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540560  5 -   4952924 ga-----t---T-------C--
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102585  1 +  38429054 G---------------------
i Puma_concolor.QAVW01001104.1                           C 0 I 4
s Pygathrix_cinerea.k141_1153803                             30061  7 +     91421 GA-----T---T-------CCT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156612  7 -   7812017 GA-----T---T-------CCT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10912  7 +     72585 GA-----T---T-------CCT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4918  5 -     55207 GA-----T---T-------C--
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2917974  5 +   3329780 ga-----t---t-------c--
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4519  7 +      7119 GA-----T---T-------CCT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125189  7 + 195417433 GA-----T---T-------CCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239361  7 -   7961872 GA-----T---T-------CCT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78861  5 -    116970 GA-----T---T-------C--
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9284  6 +     12412 GA-----T---T-------CC-
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               741  6 +      9876 GA-----T---T-------CC-
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16345  6 -     24931 GA-----T---T-------CC-
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1225  6 +      4564 GA-----T---T-------CC-
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4030  6 -      7443 GA-----T---T-------CC-
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394937  6 - 209938924 GA-----T---T-------CC-
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1645  6 +     10149 GA-----T---T-------CC-
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                982  6 +     10417 GA-----T---T-------CC-
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14369  5 +     16473 GA-----T---T-------C--
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111112  6 + 121099817 ga-----t---t-------cc-
i Saimiri_boliviensis.NW_024100920.1                     C 0 I 1
s Saimiri_cassiquiarensis.k141_1467335                       32682  6 -     47369 GA-----T---T-------CC-
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33066  6 -     79414 GA-----T---T-------CC-
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29757  6 -     34454 GA-----T---T-------CC-
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17159  6 -     22428 GA-----T---T-------CC-
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32312  6 -     47109 GA-----T---T-------CC-
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240336  6 +   5703754 GA-----T---T-------CC-
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9927  6 +     21866 GA-----T---T-------CC-
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122406  5 +    313613 GA-----C---T-------C--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 5
s Semnopithecus_entellus.k141_583282                          1500  7 +     11297 GA-----T---T-------CCT
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31893  7 +     58920 GA-----T---T-------CCT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18391  7 -     45317 GA-----T---T-------CCT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26049  7 -     42441 GA-----T---T-------CCT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28725  7 -     29113 GA-----T---T-------CCT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31802  7 -     48123 GA-----T---T-------CCT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867151  5 -   1910179 GA-----T---A-------C--
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674406  5 +  18376816 GA-----C---T-------C--
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1871986  5 +   3870691 aa-----c---t-------c--
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16115  5 -     97271 GA-----T---T-------C--
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 4
s Suricata_suricatta.SurSur_flattened_line_6629             128742  5 +    196729 GA-----T---T-------C--
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 4
s Sus_scrofa.CM000828.4                                    6648011  5 +  69701581 ga-----t---t-------c--
i Sus_scrofa.CM000828.4                                  C 0 I 9
s Symphalangus_syndactylus.tarseq_199                       393899  7 +   1523678 GA-----T---T-------CCT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17447  5 +     22964 GA-----T---T-------C--
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194844  5 +    199430 GA-----T---T-------C--
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108824  5 -    539355 GA-----T---T-------C--
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4453  5 +      9917 GA-----T---T-------C--
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11249  5 +     20590 GA-----T---T-------C--
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356053  7 - 186847797 ga-----t---t-------cct
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27686  5 -     33621 GA-----C---A-------T--
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22422  2 -     31044 -----------T-------C--
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483754  5 -    610378 TA-----C---C-------T--
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23801  7 +     26378 GA-----T---T-------CCT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36600  7 -     78344 GA-----T---T-------CCT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23126  7 +     25722 GA-----T---T-------CCT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31556  7 -     62838 GA-----T---T-------CCT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31547  7 +     46913 GA-----T---T-------CCT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12284  7 -     28527 GA-----T---T-------CCT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33487  7 -     64340 GA-----T---T-------CCT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31525  7 -     63452 GA-----T---T-------CCT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12976  7 +     22490 GA-----T---T-------CCT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          942  7 +      9911 GA-----T---T-------CCT
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          737  7 -     33539 GA-----T---T-------CCT
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258496  7 -   6242583 GA-----T---T-------CCT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4515  7 +     19340 GA-----T---T-------CCT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177628  5 -    200418 GA-----T---T-------A--
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485432  5 -  10818551 gg-----t---t-------c--
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839397  5 -   4065304 ga-----g---t-------t--
i Tupaia_chinensis.KB320699.1                            C 0 I 3
s Tupaia_tana.TupTan_flattened_line_394                      13490  5 -     70247 GA-----G---T-------T--
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 3
s Tursiops_truncatus.MRVK01000835.1                       17368996  5 -  33153633 GA-----T---T-------C--
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7191  5 -     21056 GA-----C---T-------C--
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 5
s Ursus_maritimus.KK499267.1                                185315  5 +   5085361 GA-----T---T-------C--
i Ursus_maritimus.KK499267.1                             C 0 I 4
s Vicugna_pacos.KN270157.1                                   80136  5 +   5488506 ga-----t---t-------t--
i Vicugna_pacos.KN270157.1                               I 613 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108672  5 -    112863 GA-----T---T-------C--
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        177857  5 -    224448 GA-----C---T-------C--
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32318  5 -     86975 GA-----T---T-------C--
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 4
s Ziphius_cavirostris.ZipCav_flattened_line_334639             957  5 +      3447 GA-----T---T-------C--
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Nannospalax_galili.KL204047.1                             950156 17 +   3037898 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Zapus_hudsonius.ZapHud_scaffold_11398                       4514  0 -     63895 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    52716 15 +     77746 I
e Rattus_norvegicus.chr16                                 37025869 17 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            40662 17 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         250931 17 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    7712 17 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    97170 17 -    140218 I
e Muscardinus_avellanarius.MusAve_scaffold_5560               2963  2 -    124358 I
e Mus_spretus.CM004101.1                                  39500209 17 + 130317789 I
e Mus_pahari.LT608297.1                                   58219252 17 +  89631738 I
e Mus_musculus.chr8                                       41691290 17 + 129401213 I
e Mus_caroli.LT608237.1                                   35597750 17 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15966555 17 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53128 17 -    140813 I
e Jaculus_jaculus.JH725527.1                               1242770 296 +   9596543 I
e Ellobius_talpinus.LOJH01026522.1                           17069 17 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          35140 17 +    110024 I
e Cricetulus_griseus.LT883664.1                          213118941 17 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 47428 16 -     83289 I
e Allactaga_bullata.AllBul_scaffold_20030                    21217 300 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28733 17 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9864 1 +     36723 T
s Allenopithecus_nigroviridis.k141_3755588                   50809 1 +     53615 T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2836 1 +     13857 T
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19392 1 -     21945 T
i Allochrocebus_preussi.k141_1993939                     I 1 C 0
s Allochrocebus_solatus.k141_3554717                         21076 1 +     32033 T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74337 1 -     84148 T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46582 1 -     78289 T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46007 1 +     55831 T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44469 1 -     64179 T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1577 1 -      3959 T
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43094 1 +     45454 T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48743 1 +     70886 T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10913 1 +     30854 T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35049 1 +     42133 T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    3254 1 +     17741 T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3879 1 -     15923 T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674161 1 +   5030052 t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4155 1 -     16391 T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3714 1 -     17186 T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276810 1 +  21539123 T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12976 1 +     48076 T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8114 1 -     28759 T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35667 1 +     44353 T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51038 1 -     71267 T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25094 1 -     33135 T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Cacajao_ayresi.k141_96119                                   9901 1 +     28062 T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45192 1 -     91139 T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22719 1 +     95584 T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22632 1 +    119600 T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12242 1 +     18648 T
i Callibella_humilis.k141_1233062                        C 0 I 1
s Callimico_goeldii.k141_1609886                             11750 1 -     13885 T
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3849 1 -      8861 T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456241 1 + 189096842 T
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 2
s Callithrix_kuhlii.k119_102356                               3763 1 +      8664 T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Cebuella_niveiventris.k141_592277                           7162 1 -     12580 T
i Cebuella_niveiventris.k141_592277                      C 0 I 11
s Cebuella_pygmaea.k141_145798                               45218 1 +     53515 T
i Cebuella_pygmaea.k141_145798                           C 0 I 10
s Cebus_albifrons.Contig27                                  375951 1 -  26074798 T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10022 1 -     34880 T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69118 1 -     89041 T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cercocebus_atys.KQ010504.1                                143892 1 -   4669795 t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47631 1 +     47900 T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3064 1 -     14410 T
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47446 1 -    148725 T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29724 1 -     40656 T
i Cercopithecus_ascanius.k141_3120866                    C 0 I 2
s Cercopithecus_cephus.k141_4183004                           9683 1 +     20796 T
i Cercopithecus_cephus.k141_4183004                      C 0 I 2
s Cercopithecus_diana.k141_132293                            14796 1 -     17524 T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30529 1 -     34525 T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14307 1 -     25376 T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366896 1 -  39242232 T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272621 1 +  21565898 T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34988 1 -     45857 T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29889 1 -     32606 T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6049 1 +      8499 T
i Cercopithecus_petaurista.k141_42573                    C 0 I 2
s Cercopithecus_pogonias.k141_6079                           28449 1 +     70610 T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25411 1 +     36323 T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10987 1 -     32913 T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21400 1 -     40346 T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21654 1 +    216457 T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21444 1 +     39636 T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33393 1 -     52013 T
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44533 1 -    112038 T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10083 1 +     34062 T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346311 1 +  18827391 T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12850 1 -     44032 T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307697 1 - 135778131 t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             412106 1 -   2368649 t
i Colobus_angolensis.KN981557.1                          I 1 C 0
s Colobus_guereza.LG01                                      381988 1 - 200372422 T
i Colobus_guereza.LG01                                   I 1 C 0
s Colobus_polykomos.k141_906115                               5540 1 -     84244 T
i Colobus_polykomos.k141_906115                          I 1 C 0
s Erythrocebus_patas.Contig38                               265839 1 +  21539334 T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3218903                                615 1 -      2763 T
i Gorilla_beringei.k141_3218903                          C 0 I 3
s Gorilla_gorilla.LT578341.1                                259035 1 - 186649187 t
i Gorilla_gorilla.LT578341.1                             C 0 I 3
s Hoolock_leuconedys.ctg274                                    145500 1 -    630532 T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               8547 1 +     12352 T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15734 1 +     55766 T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055262 1 + 191637585 T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804140 1 +  11177569 T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45360 1 +    110728 T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                         798 1 -     23187 T
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1111 1 -     14280 T
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         753 1 +      3713 T
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      943 1 +      8855 T
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5745 1 -     13645 T
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lophocebus_aterrimus.ctg367                               336774 1 -   1826925 T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Macaca_arctoides.k141_1757516                              48166 1 -     61512 T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375828 1 -  60120075 T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28096 1 +     30207 T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2934 1 -      5035 T
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28049 1 +     30527 T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39225 1 -     50087 T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48970 1 +     51645 T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418172 1 - 187317192 t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402403 1 +  25927173 t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51574 1 -     62418 T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4105 1 +     14901 T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48047 1 +     59329 T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273954 1 +    668171 T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2586 1 -      5049 T
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5752 1 +     17132 T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325242 1 +  24302211 T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360073 1 -    752769 T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Mico_argentatus.k141_582562                                12342 1 +     17804 T
i Mico_argentatus.k141_582562                            C 0 I 4
s Mico_humeralifer.k141_1180625                              12842 1 -     12984 T
i Mico_humeralifer.k141_1180625                          C 0 I 22
s Mico_schneideri.k141_1877700                                     21161 1 -     26561 T
i Mico_schneideri.k141_1877700                                 C 0 I 4
s Miopithecus_ogouensis.k141_1534655                         25336 1 -     27822 T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Nomascus_annamensis.k141_1771965                           56435 1 -    132029 T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12530 1 -     16345 T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18419 1 +     22201 T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416649 1 -  22158432 T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28824 1 -     54323 T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  394 1 +      1186 t
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1477014 1 - 189151597 t
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Papio_anubis.CM001495.2                                   246251 1 - 183742232 t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12536 1 +     21308 T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295279 1 -  20919399 T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25176 1 -     27687 T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1855 1 +     10553 T
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1815 1 -     10386 T
i Papio_ursinus.k141_5784434                             C 0 C 0
s Piliocolobus_badius.k141_2704958                            5499 1 +     55023 T
i Piliocolobus_badius.k141_2704958                       I 1 C 0
s Piliocolobus_gordonorum.k141_381342                         5022 1 -     89929 T
i Piliocolobus_gordonorum.k141_381342                    I 2 C 0
s Piliocolobus_kirkii.k141_1310104                            5612 1 +     40849 T
i Piliocolobus_kirkii.k141_1310104                       I 2 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257341 1 +  14605196 t
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 C 0
s Pithecia_albicans.k141_1239476                             66879 1 +    207309 T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7974 1 -     25401 T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33720 1 +     58159 T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33996 1 +     63561 T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33751 1 +     51148 T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558727 1 -   4542175 T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33735 1 +     51125 T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10160 1 +     39866 T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5242 1 -      9282 T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44646 1 -     87950 T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45040 1 -     88961 T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9738 1 -     39403 T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44690 1 +     87928 T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9737 1 -     60166 T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16658 1 -     67232 T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44590 1 -     90634 T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46057 1 +     89403 T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182200 1 - 189387572 t
i Pongo_abelii.CM009266.2                                I 1 C 0
s Pongo_pygmaeus.ctg66                                      196943 1 -   9816681 T
i Pongo_pygmaeus.ctg66                                   I 1 C 0
s Saguinus_bicolor.k141_161125                                9290 1 +     12412 T
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               747 1 +      9876 T
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16351 1 -     24931 T
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1231 1 +      4564 T
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4036 1 -      7443 T
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394943 1 - 209938924 T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1651 1 +     10149 T
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                                988 1 +     10417 T
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111119 1 + 121099817 t
i Saimiri_boliviensis.NW_024100920.1                     I 1 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32688 1 -     47369 T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33072 1 -     79414 T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29763 1 -     34454 T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17165 1 -     22428 T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32318 1 -     47109 T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240342 1 +   5703754 T
i Sapajus_apella.ctg103                                  C 0 I 2
s Sapajus_macrocephalus.k141_796559                           9933 1 +     21866 T
i Sapajus_macrocephalus.k141_796559                      C 0 I 2
s Symphalangus_syndactylus.tarseq_199                       393906 1 +   1523678 T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Theropithecus_gelada.CM009954.1                           356060 1 - 186847797 t
i Theropithecus_gelada.CM009954.1                        C 0 C 0
e Fukomys_damarensis.KN121974.1                            2925953 0 -   3816255 C
e Myocastor_coypus.MyoCoy_scaffold_57531                      1048 0 -     27262 C
e Sorex_araneus.JH798187.1                                 4674411 0 +  18376816 C
e Erinaceus_europaeus.JH835339.1                           3671350 4 +   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_77846              12390 0 +     12657 C
e Capromys_pilorides.CapPil_scaffold_26391                    1985 0 -     20114 C
e Nannospalax_galili.KL204047.1                             950156 17 +   3037898 I
e Dasyprocta_punctata.DasPun_flattened_line_15900            31590 0 +     75252 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450               2233 0 -      4087 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              27691 0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     35413 1 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005        7432 0 +      9367 C
e Octodon_degus.JH651603.1                                11059316 0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75337 0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1938392 0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 12722 0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_77284                    835 0 +     14058 C
e Dipodomys_ordii.KN672350.1                              18955223 0 -  37912305 C
e Cuniculus_paca.CunPac_flattened_line_7025                  12149 0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  22657 0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_8919                          287 0 -    143979 C
e Cavia_porcellus.DS562891.1                               5003399 0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4999958 0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    49523 0 +    145209 C
e Echinops_telfairi.JH980293.1                            62858348 0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_201229               2866 0 +     11607 C
e Elephantulus_edwardii.JH947257.1                         9113397 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11868850 0 -  20541912 C
e Pygathrix_nigripes_a.k141_215492                             10919 0 +     72585 C
e Pygathrix_nigripes_b.ctg100                                  156619 0 -   7812017 C
e Pygathrix_cinerea.k141_1153803                             30068 0 +     91421 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            609487 0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_147047                 2010 0 +     10270 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   22424 0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2112689 0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            15331 0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     21861 0 +     24238 C
e Carollia_perspicillata.CarPer_scaffold_107871               3858 0 +      9923 C
e Tupaia_tana.TupTan_flattened_line_394                      13495 3 -     70247 I
e Tupaia_chinensis.KB320699.1                              1839402 3 -   4065304 I
e Zalophus_californianus.ZalCal_flattened_line_17732         32323 4 -     86975 I
e Vulpes_lagopus.VulLag_flattened_line_12041                108677 0 -    112863 C
e Ursus_maritimus.KK499267.1                                185320 4 +   5085361 I
e Spilogale_gracilis.SpiGra_flattened_line_13525             16120 4 -     97271 I
e Pteronura_brasiliensis.PteBra_flattened_line_48144          7895 4 -     18639 I
e Otocyon_megalotis.JAEUCK010005147.1                        42733 0 +    559221 C
e Odobenus_rosmarus.KB229312.1                             1455117 4 +   2017862 I
e Nyctereutes_procyonoides.CAJHUB010000658.1                201783 0 +   9404916 C
e Neomonachus_schauinslandi.NINY01007730.1                11469348 4 -  31847680 I
e Mustela_putorius.JH418006.1                             14358286 4 +  14710649 I
e Mirounga_angustirostris.MirAng_flattened_line_54046        11901 4 +     27589 I
e Mellivora_capensis.MelCap_flattened_line_19308             29411 4 -     74585 I
e Lycaon_pictus.CM007581.1                                41618079 0 +  59628241 C
e Leptonychotes_weddellii.KB714746.1                        816668 4 -   3914936 I
e Enhydra_lutris.KZ291758.1                               24925398 4 +  41312741 I
e Canis_lupus_orion.HG994398.1                            45110505 0 -  63665305 C
e Canis_lupus_familiaris.chr16                            41618924 0 +  59632846 C
e Canis_lupus_dingo.QKWQ01000480.1                          225787 0 +   9314153 C
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    12446 0 -     23171 C
e CanFam4.chr16                                           42508811 0 +  60362399 C
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  8984 0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            218866 0 +    347723 C
e Ailuropoda_melanoleuca.LNAT01000098.1                   20418866 4 +  29979442 I
e Ziphius_cavirostris.ZipCav_flattened_line_334639             962 0 +      3447 C
e Zapus_hudsonius.ZapHud_scaffold_11398                       4514 0 -     63895 C
e Xerus_inauris.XerIna_scaffold_2302                        177862 0 -    224448 C
e Vicugna_pacos.KN270157.1                                   80141 0 +   5488506 C
e Uropsilus_gracilis.UroGra_scaffold_46687                    7196 5 -     21056 I
e Tursiops_truncatus.MRVK01000835.1                       17369001 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6485437 0 -  10818551 C
e Tragulus_javanicus.TraJav_scaffold_3462                   177633 0 -    200418 C
e Trachypithecus_pileatus.k141_2622778                        4522 0 +     19340 C
e Trachypithecus_phayrei.ctg124                             258503 0 -   6242583 C
e Trachypithecus_obscurus.k141_170351                          744 0 -     33539 C
e Trachypithecus_melamera.k141_750785                          949 0 +      9911 C
e Trachypithecus_leucocephalus.k141_96450                    12983 0 +     22490 C
e Trachypithecus_laotum.k141_928651                          31532 0 -     63452 C
e Trachypithecus_hatinhensis.k141_31479                      33494 0 -     64340 C
e Trachypithecus_germaini.k141_57262                         12291 0 -     28527 C
e Trachypithecus_geei.k141_1001272                           31554 0 +     46913 C
e Trachypithecus_francoisi.k141_1453105                      31563 0 -     62838 C
e Trachypithecus_cristatus.k141_180416                       23133 0 +     25722 C
e Trachypithecus_crepusculus.k141_539312                     36607 0 -     78344 C
e Trachypithecus_auratus.k141_1189070                        23808 0 +     26378 C
e Tonatia_saurophila.TonSau_scaffold_294                    483759 0 -    610378 C
e Tarsius_wallacei.k141_226975                               11254 0 +     20590 C
e Tarsius_lariang.k141_1733899                                4458 0 +      9917 C
e Tapirus_terrestris.TapTer_scaffold_755                    108829 0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      194849 0 +    199430 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                17452 0 +     22964 C
e Sus_scrofa.CM000828.4                                    6648016 9 +  69701581 I
e Suricata_suricatta.SurSur_flattened_line_6629             128747 4 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1871991 0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1867156 0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    52716 15 +     77746 I
e Semnopithecus_vetulus.k141_244474                          31809 0 -     48123 C
e Semnopithecus_schistaceus.k141_1432920                     28732 0 -     29113 C
e Semnopithecus_priam.k141_714795                            26056 0 -     42441 C
e Semnopithecus_johnii.k141_843753                           18398 0 -     45317 C
e Semnopithecus_hypoleucos.k141_1910531                      31900 0 +     58920 C
e Semnopithecus_entellus.k141_583282                          1507 0 +     11297 C
e Scalopus_aquaticus.ScaAqu_scaffold_662                    122411 5 +    313613 I
e Saiga_tatarica.SaiTat_scaffold_39512                       14374 0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78866 0 -    116970 C
e Rhinopithecus_strykeri.ctg102                             239368 0 -   7961872 C
e Rhinopithecus_roxellana.NC_044550.1                    104125196 0 + 195417433 C
e Rhinopithecus_bieti.k119_778604                             4526 0 +      7119 C
e Rhinolophus_sinicus.LVEH01000134.1                       2917979 0 +   3329780 C
e Rattus_norvegicus.chr16                                 37025869 17 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4923 0 -     55207 C
e Puma_concolor.QAVW01001104.1                            18102586 4 +  38429054 I
e Pteropus_vampyrus.KN525825.1                             3540565 0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5844049 0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            55508 0 -     66298 C
e Psammomys_obesus.NESX01036366.1                            40662 17 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_128773                 2629 0 -     12774 C
e Presbytis_mitrata.k141_584736                              47882 0 -     80239 C
e Presbytis_comata.k141_1230337                              30701 0 +     69807 C
e Platanista_gangetica.PlaMin_flattened_line_83166            4419 0 +     19503 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             7735 0 +     22231 C
e Phocoena_phocoena.PhoPho_flattened_line_24159               7398 0 -     63832 C
e Peromyscus_maniculatus.KI615324.1                         250931 17 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18537 4 +     78924 I
e Pantholops_hodgsonii.KE114653.1                          1622322 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3976201 0 +   8748460 C
e Panthera_pardus.KV860321.1                              18465600 4 -  18783137 I
e Panthera_onca.PanOnc_flattened_line_3271                   28368 4 -    230217 I
e Ovis_canadensis.OviCan_scaffold_67953                      11427 0 +     17875 C
e Ovis_aries.CM001607.2                                   26410804 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107108522 0 - 174332312 C
e Orcinus_orca.KB316932.1                                  8105877 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    7712 17 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    97170 17 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          22062 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         442405 0 -    630418 C
e Noctilio_leporinus.NocLep_scaffold_7894                   131174 0 -    149072 C
e Neophocaena_asiaeorientalis.KZ687982.1                   1235472 0 -   7148211 C
e Nasalis_larvatus.k141_1350636                              32121 0 +     34575 C
e Myotis_myotis.MyoMyo_scaffold_66571                         6240 0 +     18357 C
e Myotis_lucifugus.GL429869.1                               387453 0 +   4330536 C
e Myotis_davidii.KB100139.1                                4391414 0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9797240 0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_5560               2963 2 -    124358 I
e Mus_spretus.CM004101.1                                  39500209 17 + 130317789 I
e Mus_pahari.LT608297.1                                   58219252 17 +  89631738 I
e Mus_musculus.chr8                                       41691290 17 + 129401213 I
e Mus_caroli.LT608237.1                                   35597750 17 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          45235 0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   21898 4 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  32009 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 182845 0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   362806 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             45989 0 -     48117 C
e Miniopterus_natalensis.LDJU01000034.1                    6368258 0 -   8254450 C
e Microtus_ochrogaster.CM001695.1                         15966555 17 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                188430 0 +    200668 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     90698 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53128 17 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       153832 0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7504628 0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             224010 4 +    317179 I
e Manis_javanica.JSZB01003497.1                             676713 4 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                226433 0 -    270270 C
e Loxodonta_africana.GL010049.1                           39087829 0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             344414 0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_61236                     1306 0 -     25587 C
e Kogia_breviceps.KogBre_flattened_line_3970                 75070 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1242770 296 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447               13232 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     390428 0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      11211 0 -    135385 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  73784 0 +     83186 C
e Hipposideros_galeritus.HipGal_scaffold_363447                578 0 +       852 C
e Hipposideros_armiger.JXIK01000431.1                      1556209 0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803               11165 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_116546                6097 0 +      8654 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 15778 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                34149 4 -    327341 I
e Graphiurus_murinus.GraMur_scaffold_10447                    6859 0 -     78134 C
e Glis_glis.GliGli_scaffold_163929                            4944 0 -      6791 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                       2111 0 +    660261 C
e Galeopterus_variegatus.GalVar_scaffold_51812                4925 0 -     28519 C
e Felis_nigripes.FelNig_flattened_line_44075                   960 4 +     25330 I
e Felis_catus_fca126.CM031415.1                          185120318 4 - 205367284 I
e Eubalaena_japonica.EubJap_flattened_line_57114              2053 0 +     25849 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           74338 0 -    133382 C
e Equus_przewalskii.KK951119.1                              415040 0 -    498745 C
e Equus_caballus.CM000403.2                               21379058 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3045128 0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12582619 0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           17069 17 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          35140 17 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       245853 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               9499 0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  142464 0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  667662 0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18635128 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    650021 0 -   1526836 C
e Cryptoprocta_ferox.CryFer_flattened_line_16129              7747 4 +     87169 I
e Cricetulus_griseus.LT883664.1                          213118941 17 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 47428 16 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          6137 0 -      8242 C
e Condylura_cristata.JH655891.1                           35810581 6 +  53390261 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22224 0 +     27315 C
e Cephalopachus_bancanus.k141_1140705                         1930 0 -     76265 C
e Catagonus_wagneri.CatWag_scaffold_2839                     83064 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    31559 0 -     39886 C
e Carlito_syrichta.NW_007259797.1                           274267 0 +    496798 C
e Capra_hircus.CM004588.1                                 26598064 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27416067 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1212766 0 +   1652518 C
e Camelus_dromedarius.KN272107.1                           4669068 0 +   7040546 C
e Camelus_bactrianus.KN276810.1                            7634767 0 +  17673402 C
e Bubalus_bubalis.KI419123.1                               1536219 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27559538 0 -  45695690 C
e Bos_mutus.JH880303.1                                      768993 0 +   1948126 C
e Bos_indicus.CM003047.1                                  28423392 0 -  48749331 C
e Bison_bison.KN261452.1                                     36252 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     93053 0 +    124022 C
e Balaenoptera_bonaerensis.DF411050.1                         3225 0 -     25979 C
e Balaenoptera_acutorostrata.KI537508.1                    7966724 0 -  23207421 C
e Aplodontia_rufa.AprRuf_scaffold_46868                      27324 0 -     32367 C
e Antilocapra_americana.AntAmePen_scaffold_21030             53219 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      180470 0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1592063 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    21217 300 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28733 17 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           816360 4 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9865  7 +     36723 TT------T--T------------T-T--T
s Acinonyx_jubatus.LLWD01001279.1                           816364  3 +   1699592 ------------------------T-C--T
i Acinonyx_jubatus.LLWD01001279.1                        I 4 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418870  3 +  29979442 ------------------------T-C--T
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 4 C 0
s Ailurus_fulgens.LNAC01001112.1                            218866  2 +    347723 -t------t---------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 3
s Allenopithecus_nigroviridis.k141_3755588                   50810  7 +     53615 TT------T--T------------T-T--T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2837  7 +     13857 TT------T--T------------T-T--T
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19393  7 -     21945 TT------T--T------------T-T--T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21077  8 +     32033 TTT-----T--T------------T-T--T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74338  7 -     84148 TT------T--C------------T-T--T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46583  4 -     78289 TT------T--C------------------
i Alouatta_caraya.k141_1109140                           C 0 I 2
s Alouatta_discolor.k141_2561099                             46008  7 +     55831 TT------T--C------------T-T--T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44470  7 -     64179 TT------T--C------------T-T--T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1578  4 -      3959 TT------T--C------------------
i Alouatta_macconnelli.k141_1277969                      C 0 I 2
s Alouatta_nigerrima.k141_376068                             43095  7 +     45454 TT------T--C------------T-T--T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48744  7 +     70886 TT------T--C------------T-T--T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10914  7 +     30854 TT------T--C------------T-T--T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35050  7 +     42133 TT------T--C------------T-T--T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592063 12 +   2318259 -T------T--TGCTT------GCT-C--T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180470 12 -    412891 -T------T--TTCCTT-----C-T-T--T
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53219 12 -     68529 -T------T--TTCTT------GCT-C--T
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3255  7 +     17741 TT------T--T------------T-T--T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3880  7 -     15923 TT------T--T------------T-T--T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674162  7 +   5030052 tt------t--t------------t-t--t
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4156  7 -     16391 TT------T--T------------T-T--T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3715  7 -     17186 TT------T--T------------T-T--T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27324 13 -     32367 -T------T--TTTCTT----CC-T-C--C
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  8984 12 -     15198 -T------T--TTCCTT-----C-T-T--C
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276811  7 +  21539123 TT------T--T------------T-T--T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 I 2
s Ateles_belzebuth.k141_1572163                              12977  4 +     48076 TT------T--T------------------
i Ateles_belzebuth.k141_1572163                          C 0 I 4
s Ateles_chamek.k141_615173                                   8115  4 -     28759 TT------T--T------------------
i Ateles_chamek.k141_615173                              C 0 I 2
s Ateles_geoffroyi_a.k141_1283730                              35668  7 +     44353 TT------T--T------------T-T--T
i Ateles_geoffroyi_a.k141_1283730                          C 0 I 2
s Ateles_marginatus.k141_970259                              51039  4 -     71267 TT------T--T------------------
i Ateles_marginatus.k141_970259                          C 0 I 4
s Ateles_paniscus.k141_866194                                25095  8 -     33135 TT------T--T------------TTT--T
i Ateles_paniscus.k141_866194                            C 0 I 2
s Balaenoptera_acutorostrata.KI537508.1                    7966724 12 -  23207421 -T------T--TTCTT------GCT-C--T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 3
s Balaenoptera_bonaerensis.DF411050.1                         3225 12 -     25979 -T------T--TTCTT------GCT-C--T
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 3
s Beatragus_hunteri.BeaHun_scaffold_7278                     93053 12 +    124022 -T------T--TGCTT------GCT-C--T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36252 12 +    288883 -T------T--TTCTT------GCT-C--T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423392 12 -  48749331 -t------t--t-----tcttgC-T-C--T
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      768993 12 +   1948126 -t------t--t-----tcttgC-T-C--T
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559538 12 -  45695690 -t------t--t-----tcttgC-T-C--T
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536219 12 -   4408762 -T------T--TTCTT------GCT-C--T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9902  7 +     28062 TT------T--T------------T-T--T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45193  7 -     91139 TT------T--T------------T-T--T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22720  7 +     95584 TT------T--T------------T-T--T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22633  7 +    119600 TT------T--T------------T-T--T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12244 14 +     18648 TT------T--TTTTTTTTT--G-T-----
i Callibella_humilis.k141_1233062                        I 1 C 0
s Callimico_goeldii.k141_1609886                             11751 14 -     13885 TT------T--TTTTTTTTT--G-T-----
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3850 14 -      8861 TT------T--TTTTTTTTT--G-T-----
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456244 16 + 189096842 TT------T--TTTTTTTTTTTG-T-----
i Callithrix_jacchus.pat_scaffold_3                      I 2 C 0
s Callithrix_kuhlii.k119_102356                               3764 16 +      8664 TT------T--TTTTTTTTTTTG-T-----
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7634767 12 +  17673402 -t------t--t-----tctttc-t-c--t
i Camelus_bactrianus.KN276810.1                          C 0 I 42
s Camelus_dromedarius.KN272107.1                           4669068 12 +   7040546 -t------t--t-----tctttc-t-c--t
i Camelus_dromedarius.KN272107.1                         C 0 I 42
s Camelus_ferus.KB017975.1                                 1212766 12 +   1652518 -t------t--t-----tctttc-t-c--t
i Camelus_ferus.KB017975.1                               C 0 I 42
s CanFam4.chr16                                           42508811  2 +  60362399 -T------T---------------------
i CanFam4.chr16                                          C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12446  2 -     23171 -T------T---------------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                          225787  2 +   9314153 -T------T---------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 1
s Canis_lupus_familiaris.chr16                            41618924  2 +  59632846 -T------T---------------------
i Canis_lupus_familiaris.chr16                           C 0 I 1
s Canis_lupus_orion.HG994398.1                            45110505  2 -  63665305 -T------T---------------------
i Canis_lupus_orion.HG994398.1                           C 0 I 1
s Capra_aegagrus.CM003241.1                               27416067 12 -  46296322 -T------T--TGCTT------GCT-C--T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598064 12 +  44709034 -T------T--TGCTT------GCT-C--T
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    1985 12 -     20114 -T------T--TTTT-----ACC-T-T--C
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274267  6 +    496798 -t------t--t------------t-t--t
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               3858 12 +      9923 -T------T--TTCCTT-----C-T-T--C
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31559  9 -     39886 -TT-----T--AGT----------T-C--C
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83064 12 -    217609 -T------T--TTCTTT-----C-T-T--T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4999958  8 +  23392119 -t------t--t---------tc-t-t--c
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5003399  8 +  23407841 -t------t--t---------tc-t-t--c
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          287  8 -    143979 -T------T--TT---------C-T-T--C
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_niveiventris.k141_592277                           7174  1 -     12580 ------------------------T-----
i Cebuella_niveiventris.k141_592277                      I 11 C 0
s Cebuella_pygmaea.k141_145798                               45229  1 +     53515 ------------------------T-----
i Cebuella_pygmaea.k141_145798                           I 10 C 0
s Cebus_albifrons.Contig27                                  375952  7 -  26074798 TT------T--T------------T-T--T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10023  6 -     34880 -T------T--T------------T-T--T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69119  7 -     89041 TT------T--T------------T-T--T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         1930  6 -     76265 -T------T--T------------T-T--T
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495391 12 -  27778364 -t------t--t-----tctttc-t-c--t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22224 12 +     27315 -T------T--TTCTTT-----C-T-C--T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143893  7 -   4669795 tt------t--t------------t-t--t
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47632  7 +     47900 TT------T--T------------T-T--T
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3065  7 -     14410 TT------T--T------------T-T--T
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47447  7 -    148725 TT------T--T------------T-T--T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29727  4 -     40656 -----------T------------T-T--T
i Cercopithecus_ascanius.k141_3120866                    I 2 C 0
s Cercopithecus_cephus.k141_4183004                           9686  4 +     20796 -----------T------------T-T--T
i Cercopithecus_cephus.k141_4183004                      I 2 C 0
s Cercopithecus_diana.k141_132293                            14797  7 -     17524 TT------C--T------------T-T--T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30530  7 -     34525 TT------T--T------------T-T--T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14308  7 -     25376 TT------C--T------------T-T--T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366897  7 -  39242232 TT------C--T------------T-T--T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272622  7 +  21565898 TT------C--T------------T-T--T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34989  7 -     45857 TT------C--T------------T-T--T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29890  7 -     32606 TT------C--T------------T-T--T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6052  4 +      8499 -----------T------------T-T--T
i Cercopithecus_petaurista.k141_42573                    I 2 C 0
s Cercopithecus_pogonias.k141_6079                           28450  7 +     70610 TT------C--T------------T-T--T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25412  7 +     36323 TT------C--T------------T-T--T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15331 12 -     19938 -T------T--TTCTT-----AC-T-T--C
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10988  7 -     32913 TT------T--T------------T-T--T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21401  7 -     40346 TT------T--T------------T-T--T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21655  7 +    216457 TT------T--T------------T-T--T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21445  7 +     39636 TT------T--T------------T-T--T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33394  9 -     52013 TT------TTAT------------T-T--T
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44534  7 -    112038 TT------T--T------------T-T--T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10084  7 +     34062 TT------T--T------------T-T--T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346312  7 +  18827391 TT------T--T------------T-T--T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12851  7 -     44032 TT------T--T------------T-T--T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307698  7 - 135778131 tt------t--t------------t-t--t
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2010 12 +     10270 -T------T--TCCTT------GCT-T--C
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            609487 12 -    839153 -t------t--t-----ccttgc-t-t--c
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2233 13 -      4087 -T------T--TTCCTTT----C-T-C--T
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412107  7 -   2368649 tt------t--t------------t-t--t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381989  7 - 200372422 TT------T--T------------T-T--T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5541  8 -     84244 TT------TT-T------------T-T--T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810587  3 +  53390261 ------------------------T-T--T
i Condylura_cristata.JH655891.1                          I 6 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6137 13 -      8242 -T------T--TTTCTCT----C-T-C--T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12390 12 +     12657 -T------T--TCTTT-----CC-T-C--T
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7751  3 +     87169 ------------------------T-C--T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 4 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650021  3 -   1526836 -T------C--C------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22657 12 +     50838 -T------T--TTTTAT-----C-T-T--C
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12149  8 +     36344 -T------T--TT---------C-T-T--C
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31590  7 +     75252 --------T--TT---------C-T-T--C
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2112689 12 -   2246927 -T------T--TTCTT-----AC-T-T--C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635128 12 -  35494412 -T------T--TT-----Cttgc-t-c--t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11868850 12 -  20541912 -t------t--t-----tccttc-t-c--t
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667662 12 -   1390856 -t------t--t-----tctttc-t-c--t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142464 12 -    198055 -T------T--TTCTTT-----C-T-C--T
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955223  9 -  37912305 -g-----ct--t---------tc-t-c--c
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                    835  9 +     14058 -G-----CT--TT---------C-T-C--C
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 12722  8 +     14636 -T------T--TT---------C-T-T--C
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62858348 12 - 111700974 -t------t--t-----tcttcc-t-c--c
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9499 12 +     19438 -T------T--TTGAT-----AC-T-C--T
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       245853 12 -    607251 -t------t--t-----tcttgc-t-c--t
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9113397 12 -  10337057 -g------t--t-----tctttc-t-t--c
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925402  3 +  41312741 ------------------------t-c--t
i Enhydra_lutris.KZ291758.1                              I 4 C 0
s Eptesicus_fuscus.JH977646.1                             12582619 12 +  14770903 -t------t--t-----tgtttc-t-t--t
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045128 12 -   4378816 -t------t--t-----tctttc-t-c--t
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379058 12 +  39960074 -t------t--t-----tctttc-t-c--t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415040 12 -    498745 -t------t--t-----tctttc-t-c--t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671354  3 +   7059049 ------------------------C-C--T
i Erinaceus_europaeus.JH835339.1                         I 4 C 0
s Erythrocebus_patas.Contig38                               265840  7 +  21539334 TT------T--A------------T-T--T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74338 12 -    133382 -T------T--TTCTT------GCT-C--T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_57114              2053 12 +     25849 -T------T--TTCTT------GCT-C--T
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250366  3 - 206538554 ------------------------T-C--T
i Felis_catus.CM001381.2                                 I 4 C 0
s Felis_catus_fca126.CM031415.1                          185120322  3 - 205367284 ------------------------T-C--T
i Felis_catus_fca126.CM031415.1                          I 4 C 0
s Felis_nigripes.FelNig_flattened_line_44075                   964  3 +     25330 ------------------------T-C--T
i Felis_nigripes.FelNig_flattened_line_44075             I 4 C 0
s Fukomys_damarensis.KN121974.1                            2925953 12 -   3816255 -t------t--t-----ttttct-t-t--c
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                4925 12 -     28519 -T------T--TTCTTT-----C-T-C--T
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2111 12 +    660261 -t------t--t-----tcttgc-T-G--T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            4944 11 -      6791 -T------T--TTCCT------C-T-T--C
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                619  3 -      2763 ------------------------T-T--T
i Gorilla_beringei.k141_3218903                          I 3 C 0
s Gorilla_gorilla.LT578341.1                                259039  3 - 186649187 ------------------------t-t--t
i Gorilla_gorilla.LT578341.1                             I 3 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    6859 11 -     78134 -T------T--TCCCT------C-T-T--C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34153  3 -    327341 ------------------------T-C--T
i Helogale_parvula.HelPar_flattened_line_2585            I 4 I 17
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15778 12 +     48891 -T------T--TGCTT------GCT-C--T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938392 12 -  22651954 -T------T--TTTAT-----CC-T-C--T
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6097 12 +      8654 -T------T--TTCTGT-----C-T-C--T
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11165 12 -     36432 -T------T--TTCTT------GCT-C--T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556209 13 -   1711038 -t------t--t----ttttccc-t-c--t
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_363447                578 13 +       852 -T------T--TTTTT----CCC-T-C--T
i Hipposideros_galeritus.HipGal_scaffold_363447          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145501  4 -    630532 TT------T--T------------------
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73784  2 +     83186 -T------T---------------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 3
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75337  8 +    143317 -T------T--TT---------C-T-T--C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               8548  4 +     12352 TT------T--T------------------
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15735  4 +     55766 TT------T--T------------------
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055263  4 + 191637585 TT------T--T------------------
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804141  4 +  11177569 TT------T--T------------------
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11211  8 -    135385 -T------T--T---------CC-T-C--C
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390428 13 +   7955117 -t------t--t----ttcttcc-t-c--c
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13232 12 -     16823 -T------T--TTCTT------GCT-C--T
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75070 12 -     97402 -T------T--TTCTT------GCT-C--T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45361  7 +    110728 TT------T--T------------T-T--T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1306 12 -     25587 -T------T--TTGTTT-----C-T-T--T
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                         799 15 -     23187 TT------C--TTTTTTTTT----T-T--T
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1112 15 -     14280 TT------C--TTTTTTTTT----T-T--T
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         754 15 +      3713 TT------T--TTTTTTTTT----T-T--T
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                      944 13 +      8855 TT------T--TTTTTTTT---G-T-----
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5746 12 -     13645 TT------T--TTTTTTT----G-T-----
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816672  3 -   3914936 ------------------------t-c--t
i Leptonychotes_weddellii.KB714746.1                     I 4 C 0
s Lepus_americanus.LepAme_scaffold_56121                     21861 12 +     24238 -T------T--TTCTGT-----C-T-C--C
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344414 12 +    662738 -T------T--t-----tcttgc-t-c--t
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336775  8 -   1826925 TT------TT-T------------T-T--T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39087829 12 +  43346337 -t------t--t-----tctttc-t-c--c
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618079  2 +  59628241 -T------T---------------------
i Lycaon_pictus.CM007581.1                               C 0 I 1
s Macaca_arctoides.k141_1757516                              48167  7 -     61512 TT------T--T------------T-T--T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375829  7 -  60120075 TT------T--T------------T-T--T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28097  7 +     30207 TT------T--T------------T-T--T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2935  7 -      5035 TT------T--T------------T-T--T
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28050  7 +     30527 TT------T--T------------T-T--T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39226  7 -     50087 TT------T--T------------T-T--T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48971  7 +     51645 TT------T--T------------T-T--T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418173  7 - 187317192 tt------t--t------------t-t--t
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402404  7 +  25927173 tt------t--t------------t-t--t
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51575  7 -     62418 TT------T--T------------T-T--T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4106  7 +     14901 TT------T--T------------T-T--T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48048  7 +     59329 TT------T--T------------T-T--T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273955  7 +    668171 TT------T--T------------T-T--T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2587  7 -      5049 TT------T--T------------T-T--T
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5753  8 +     17132 TT------TT-T------------T-T--T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226433 12 -    270270 -T------T--TTGAT-----AC-T-T--T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325243  7 +  24302211 TT------T--T------------T-T--T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360074  7 -    752769 TT------T--T------------T-T--T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676717  3 -    737560 ------------------------t-c--t
i Manis_javanica.JSZB01003497.1                          I 4 I 6
s Manis_pentadactyla.KN006162.1                             224014  3 +    317179 ------------------------T-C--T
i Manis_pentadactyla.KN006162.1                          I 4 I 6
s Marmota_marmota.CZRN01000018.1                           7504628 13 +  40650429 -t------t--t----ttcttcc-t-c--c
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       153832  7 +    207569 -T------T--T----------C-T-C--T
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29415  3 -     74585 ------------------------T-C--T
i Mellivora_capensis.MelCap_flattened_line_19308         I 4 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90698 12 +     93471 -T------T--TTCTT------GCT-C--T
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12347 20 +     17804 TTTTTTTTT--TTTTTTTTT--G-T-----
i Mico_argentatus.k141_582562                            I 4 C 0
s Mico_humeralifer.k141_1189820                                 80 14 +      5551 TT------T--TTTTTTTTT--G-T-----
i Mico_humeralifer.k141_1189820                          I 49 I 1
s Mico_schneideri.k141_1877700                                     21166 12 -     26561 --------T--TTTTTTTTT--G-T-----
i Mico_schneideri.k141_1877700                                 I 4 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49523 12 +    145209 -T------T--GTCTTT-----C-T-C--C
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188430 12 +    200668 -T------T--TTCCTT-----C-T-T--T
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368258  3 -   8254450 -t------t--t------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_23309             45989  3 -     48117 -T------T--T------------------
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 1
s Miopithecus_ogouensis.k141_1534655                         25337  6 -     27822 TT------T--T------------T-T---
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11905  3 +     27589 ------------------------T-C--T
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 4 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362806 12 +    437263 -T------T--TTCTT------GCT-C--T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182845 12 +    366855 -T------T--TTCCTT-----C-T-T--T
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32009 12 -     82753 -T------T--TTCTT------GCT-C--T
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21902  3 -     63510 ------------------------T-C--T
i Mungos_mungo.MunMun_flattened_line_18455               I 4 I 17
s Murina_feae.MurFea_scaffold_17764                          45235 12 +     47283 -T------T--TTGTTT-----C-A-T--T
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               2965  3 -    124358 ------------------------T-T--C
i Muscardinus_avellanarius.MusAve_scaffold_5560          I 2 C 0
s Mustela_putorius.JH418006.1                             14358290  3 +  14710649 ------------------------t-c--t
i Mustela_putorius.JH418006.1                            I 4 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1048 12 -     27262 -T------T--TTTT-----ACC-T-T--C
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797240 12 +  10118263 -t------t--t-----tgtttc-t-t--t
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391414 12 +   6019432 -t------t--t-----tgtttc-t-t--t
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387453 12 +   4330536 -t------t--t-----tgtttc-t-t--t
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6240 12 +     18357 -T------T--TTGTTT-----C-T-T--T
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nasalis_larvatus.k141_1350636                              32121  7 +     34575 TT------T--T------------T-T--T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469352  3 -  31847680 ------------------------t-c--t
i Neomonachus_schauinslandi.NINY01007730.1               I 4 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235472 12 -   7148211 -T------T--TTCTT------GCT-C--T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_7894                   131174 12 -    149072 -T------T--CCCCTT-----C-A-T--T
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 3
s Nomascus_annamensis.k141_1771965                           56436  4 -    132029 TT------T--T------------------
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12531  4 -     16345 TT------T--T------------------
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18420  4 +     22201 TT------T--T------------------
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416650  4 -  22158432 TT------T--T------------------
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28825  4 -     54323 TT------T--T------------------
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201783  2 +   9404916 -T------T---------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 1
s Octodon_degus.JH651603.1                                11059316 12 -  11899542 -T------T--TTTT-----ACC-T-T--C
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1455121  3 +   2017862 ------------------------t-c--t
i Odobenus_rosmarus.KB229312.1                           I 4 C 0
s Odocoileus_virginianus.KZ100018.1                         442405 12 -    630418 -T------T--TTCTT------GCT-C--T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22062 12 +    150152 -t------t--t-----tcttgc-T-C--T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8105877 12 +  10937097 -t------t--t-----ttttgc-t-c--t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               2866 12 +     11607 -T------T--TTCTTT-----C-T-C--A
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108522 12 - 174332312 -t------t--t-----tctgtc-t-c--c
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42733  2 +    559221 -T------T---------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 1
s Ovis_aries.CM001607.2                                   26410804 12 -  44047080 -T------T--TGCTT------GCT-C--T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11427 12 +     17875 -T------T--TGCTT------GCT-C--T
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  395  7 +      1186 tt------t--t------------t-t--t
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1477015  7 - 189151597 tt------t--t------------t-t--t
i Pan_troglodytes.CM009242.2                             C 0 I 92
s Panthera_onca.PanOnc_flattened_line_3271                   28372  3 -    230217 ------------------------T-C--T
i Panthera_onca.PanOnc_flattened_line_3271               I 4 C 0
s Panthera_pardus.KV860321.1                              18465604  3 -  18783137 ------------------------T-C--T
i Panthera_pardus.KV860321.1                             I 4 C 0
s Panthera_tigris.KE722367.1                               3976201  2 +   8748460 -T------T---------------------
i Panthera_tigris.KE722367.1                             C 0 I 5
s Pantholops_hodgsonii.KE114653.1                          1622322 12 +   2937107 -T------T--TGCTT------GCT-C--T
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246252  7 - 183742232 tt------t--t------------t-t--t
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12537  7 +     21308 TT------T--T------------T-T--T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295280  7 -  20919399 TT------T--T------------T-T--T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25177  9 -     27687 TT------TTTT------------T-T--T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1856  7 +     10553 TT------T--T------------T-T--T
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1816  8 -     10386 TT------TT-T------------T-T--T
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18541  3 +     78924 ------------------------T-A--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7432  9 +      9367 -GT-----T--TT---------C-T-C--T
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35414 10 -     56120 -----------TTCCT-----CC-T-T--T
i Petromus_typicus.PetTyp_scaffold_17301                 I 1 I 4
s Phocoena_phocoena.PhoPho_flattened_line_24159               7398 12 -     63832 -T------T--TTCTT------GCT-C--T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5500  7 +     55023 TT------T--T------------T-T--T
i Piliocolobus_badius.k141_2704958                       C 0 I 2
s Piliocolobus_gordonorum.k141_381342                         5023  9 -     89929 TTTT----T--T------------T-T--T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5613  7 +     40849 TT------T--T------------T-T--T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257342  7 +  14605196 tt------t--t------------t-t--t
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7735  3 +     22231 -T------T--T------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 5
s Pithecia_albicans.k141_1239476                             66880  7 +    207309 TT------T--T------------T-T--T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7975  7 -     25401 TT------T--T------------T-T--T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33721  7 +     58159 TT------T--T------------T-T--C
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         33997  7 +     63561 TT------T--T------------T-T--T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33752  7 +     51148 TT------T--T------------T-T--T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558728  7 -   4542175 TT------T--T------------T-T--T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33736  7 +     51125 TT------T--T------------T-T--T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4419 12 +     19503 -T------T--TTCTT------GCT-C--T
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10161  4 +     39866 TT------T--T------------------
i Plecturocebus_bernhardi.k141_2549090                   C 0 I 2
s Plecturocebus_brunneus.k141_862875                          5243  4 -      9282 TT------T--T------------------
i Plecturocebus_brunneus.k141_862875                     C 0 I 2
s Plecturocebus_caligatus.k141_1382851                       44647  4 -     87950 TT------T--T------------------
i Plecturocebus_caligatus.k141_1382851                   C 0 I 2
s Plecturocebus_cinerascens.k141_1164729                     45041  4 -     88961 TT------T--T------------------
i Plecturocebus_cinerascens.k141_1164729                 C 0 I 2
s Plecturocebus_cupreus.k141_2351393                          9739  4 -     39403 TT------T--T------------------
i Plecturocebus_cupreus.k141_2351393                     C 0 I 2
s Plecturocebus_dubius.k141_1058799                          44691  4 +     87928 TT------T--T------------------
i Plecturocebus_dubius.k141_1058799                      C 0 I 2
s Plecturocebus_grovesi.k141_2013005                          9738  4 -     60166 TT------T--T------------------
i Plecturocebus_grovesi.k141_2013005                     C 0 I 2
s Plecturocebus_hoffmannsi.k141_3303950                      16659  4 -     67232 TT------T--T------------------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 I 2
s Plecturocebus_miltoni.k141_349282                          44591  4 -     90634 TT------T--T------------------
i Plecturocebus_miltoni.k141_349282                      C 0 I 2
s Plecturocebus_moloch.k141_1031110                          46058  4 +     89403 TT------T--T------------------
i Plecturocebus_moloch.k141_1031110                      C 0 I 2
s Pongo_abelii.CM009266.2                                   182201  7 - 189387572 tt------t--t------------t-t--t
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196944  7 -   9816681 TT------T--T------------T-T--T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30701  7 +     69807 TT------T--T------------T-T--T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47882  8 -     80239 TTT-----T--T------------T-T--T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2629 12 -     12774 -T------T--TTCTGT-----C-T-C--T
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7899  3 -     18639 ------------------------T-C--T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 4 C 0
s Pteronotus_parnellii.KE847780.1                            55508  3 -     66298 -t------t--t------------------
i Pteronotus_parnellii.KE847780.1                        C 0 I 6
s Pteropus_alecto.KB030862.1                               5844049 12 -  28871421 -T------T--TTGAT-----AC-T-C--T
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540565 12 -   4952924 -T------T--TTGAT-----AC-T-C--T
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102590  3 +  38429054 ------------------------T-C--T
i Puma_concolor.QAVW01001104.1                           I 4 C 0
s Pygathrix_cinerea.k141_1153803                             30068  7 +     91421 TT------T--T------------T-T--T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156619  7 -   7812017 TT------T--T------------T-T--T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10919  7 +     72585 TT------T--T------------T-T--T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4923 12 -     55207 -T------T--TTCTT------GCT-C--T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2917979 15 +   3329780 -t------t--t--tttttcccc-t-c--t
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4526  7 +      7119 TT------T--T------------G-T--T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125196  7 + 195417433 TT------T--T------------G-T--T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239368  7 -   7961872 TT------T--T------------G-T--T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78866 12 -    116970 -T------T--TTGAT-----AC-T-C--T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 1
s Saguinus_bicolor.k141_161125                                9291  4 +     12412 TT------T--T------------------
i Saguinus_bicolor.k141_161125                           C 0 I 5
s Saguinus_geoffroyi.k141_356064                               748  4 +      9876 TT------T--T------------------
i Saguinus_geoffroyi.k141_356064                         C 0 I 5
s Saguinus_imperator.k141_2710097                            16352  4 -     24931 TT------T--T------------------
i Saguinus_imperator.k141_2710097                        C 0 I 6
s Saguinus_inustus.k141_4502137                               1232  4 +      4564 TT------T--T------------------
i Saguinus_inustus.k141_4502137                          C 0 I 5
s Saguinus_labiatus.k141_264497                               4037  4 -      7443 TT------T--T------------------
i Saguinus_labiatus.k141_264497                          C 0 I 5
s Saguinus_midas.LG03                                       394944  4 - 209938924 TT------T--T------------------
i Saguinus_midas.LG03                                    C 0 I 5
s Saguinus_mystax.k141_6319370                                1652  4 +     10149 TT------T--T------------------
i Saguinus_mystax.k141_6319370                           C 0 I 7
s Saguinus_oedipus.k141_1368863                                989  4 +     10417 TT------T--T------------------
i Saguinus_oedipus.k141_1368863                          C 0 I 5
s Saiga_tatarica.SaiTat_scaffold_39512                       14374 12 +     16473 -T------T--TTCTT------GCT-C--T
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111120  7 + 121099817 tt------t--t------------t-t--t
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32689  7 -     47369 TT------T--T------------T-T--T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33073  6 -     79414 TT------T--T------------T-T---
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29764  4 -     34454 TT------T--T------------------
i Saimiri_oerstedii.k141_245838                          C 0 I 2
s Saimiri_sciureus.k141_1467173                              17166  6 -     22428 TT------T--T------------T-T---
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32319  7 -     47109 TT------T--T------------T-T--T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240345  4 +   5703754 -----------T------------T-T--T
i Sapajus_apella.ctg103                                  I 2 C 0
s Sapajus_macrocephalus.k141_796559                           9936  4 +     21866 -----------T------------T-T--T
i Sapajus_macrocephalus.k141_796559                      I 2 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122416  3 +    313613 ------------------------T-C--T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 5 C 0
s Semnopithecus_entellus.k141_583282                          1507  7 +     11297 TT------T--T------------T-T--T
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31900  7 +     58920 TT------T--T------------T-T--T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18398  7 -     45317 TT------T--T------------T-T--T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26056  7 -     42441 TT------T--T------------T-T--T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28732  7 -     29113 TT------T--T------------T-T--T
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31809  7 -     48123 TT------T--T------------T-T--T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867156 12 -   1910179 -T------T--TGGTTT-----C-T-C--T
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674411  1 +  18376816 -a----------------------------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1871991 13 +   3870691 -t------t--t----ttcttcc-t-c--c
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16124  3 -     97271 ------------------------T-C--T
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 4 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128751  3 +    196729 ------------------------T-C--T
i Suricata_suricatta.SurSur_flattened_line_6629          I 4 I 44
s Sus_scrofa.CM000828.4                                    6648025  3 +  69701581 ------------------------t-t--t
i Sus_scrofa.CM000828.4                                  I 9 C 0
s Symphalangus_syndactylus.tarseq_199                       393907  4 +   1523678 TT------T--T------------------
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17452 12 +     22964 -T------T--TTCCCT-----C-T-T--T
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194849 12 +    199430 -T------T--TTCTTT-----C-T-C--T
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108829 12 -    539355 -T------T--TTCTTT-----C-T-C--T
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4458  6 +      9917 -T------T--T------------T-T--T
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11254  6 +     20590 -T------T--T------------T-T--T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356061  8 - 186847797 tt------t-tt------------t-t--t
i Theropithecus_gelada.CM009954.1                        C 0 I 1
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27691 12 -     33621 -T------T--TT-----CCCCC-T-T--C
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22424 12 -     31044 -T------T--TTCT-----CAC-T-T--C
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483759 12 -    610378 -T------C--TTCCTT-----C-T-T--T
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23808  8 +     26378 TT------T--TT-----------T-T--T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36607  7 -     78344 TT------T--T------------T-T--T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23133  8 +     25722 TT------T--TT-----------T-T--T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31563  7 -     62838 TT------T--T------------T-T--T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31554  7 +     46913 TT------T--T------------T-T--T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12291  8 -     28527 TT------T--TT-----------C-T--T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33494  7 -     64340 TT------T--T------------T-T--C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31532  7 -     63452 TT------T--T------------T-T--C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12983  7 +     22490 TT------T--T------------T-T--T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          949  7 +      9911 TT------T--T------------T-T--T
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          744  7 -     33539 TT------T--T------------T-T--T
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258503  7 -   6242583 TT------T--T------------T-T--T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4522  7 +     19340 TT------T--T------------T-T--T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177633 12 -    200418 -T------T--TTCTT------GCT-C--T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485437 12 -  10818551 -t------t--t-----tctttc-t-c--c
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839405  3 -   4065304 ------------------------t-t--t
i Tupaia_chinensis.KB320699.1                            I 3 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13498  3 -     70247 ------------------------T-T--T
i Tupaia_tana.TupTan_flattened_line_394                  I 3 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369001 12 -  33153633 -T------T--TT-----cttgc-t-c--t
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7201  5 -     21056 ------------------------C-CCTG
i Uropsilus_gracilis.UroGra_scaffold_46687               I 5 C 0
s Ursus_maritimus.KK499267.1                                185324  3 +   5085361 ------------------------T-C--T
i Ursus_maritimus.KK499267.1                             I 4 C 0
s Vicugna_pacos.KN270157.1                                   80141 12 +   5488506 -t------t--t-----tctttc-t-c--t
i Vicugna_pacos.KN270157.1                               C 0 I 42
s Vulpes_lagopus.VulLag_flattened_line_12041                108677  2 -    112863 -T------T---------------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 1
s Xerus_inauris.XerIna_scaffold_2302                        177862 13 -    224448 -T------T--TTTCTT----CC-T-C--C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32327  3 -     86975 ------------------------T-C--T
i Zalophus_californianus.ZalCal_flattened_line_17732     I 4 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639             962 12 +      3447 -T------T--TTCTT------GCT-C--T
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Nannospalax_galili.KL204047.1                             950156 17 +   3037898 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Zapus_hudsonius.ZapHud_scaffold_11398                       4514  0 -     63895 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    52716 15 +     77746 I
e Rattus_norvegicus.chr16                                 37025869 17 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            40662 17 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         250931 17 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    7712 17 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    97170 17 -    140218 I
e Mus_spretus.CM004101.1                                  39500209 17 + 130317789 I
e Mus_pahari.LT608297.1                                   58219252 17 +  89631738 I
e Mus_musculus.chr8                                       41691290 17 + 129401213 I
e Mus_caroli.LT608237.1                                   35597750 17 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15966555 17 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53128 17 -    140813 I
e Jaculus_jaculus.JH725527.1                               1242770 296 +   9596543 I
e Ellobius_talpinus.LOJH01026522.1                           17069 17 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          35140 17 +    110024 I
e Cricetulus_griseus.LT883664.1                          213118941 17 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 47428 16 -     83289 I
e Allactaga_bullata.AllBul_scaffold_20030                    21217 300 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28733 17 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9872 4 +     36723 T-CTA
s Allenopithecus_nigroviridis.k141_3755588                   50817 4 +     53615 T-CTA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2844 4 +     13857 T-CTA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19400 4 -     21945 T-CTA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21085 4 +     32033 T-CTA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74345 4 -     84148 T-CTA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46589 4 -     78289 T-CTA
i Alouatta_caraya.k141_1109140                           I 2 C 0
s Alouatta_discolor.k141_2561099                             46015 4 +     55831 T-CTA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44477 4 -     64179 T-CTA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1584 4 -      3959 T-CTA
i Alouatta_macconnelli.k141_1277969                      I 2 C 0
s Alouatta_nigerrima.k141_376068                             43102 4 +     45454 T-CTA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48751 4 +     70886 T-CTA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10921 4 +     30854 T-CTA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35057 4 +     42133 T-CTA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Aotus_azarae.k141_887050                                    3262 4 +     17741 T-CTA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3887 4 -     15923 T-CTA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674169 4 +   5030052 t-cta
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4163 4 -     16391 T-CTA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3722 4 -     17186 T-CTA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276820 4 +  21539123 T-CTA
i Ateles_geoffroyi_b.tarseq_1536                            I 2 C 0
s Ateles_belzebuth.k141_1572163                              12985 4 +     48076 T-CTA
i Ateles_belzebuth.k141_1572163                          I 4 C 0
s Ateles_chamek.k141_615173                                   8121 4 -     28759 A-CTA
i Ateles_chamek.k141_615173                              I 2 C 0
s Ateles_geoffroyi_a.k141_1283730                              35677 4 +     44353 T-CTA
i Ateles_geoffroyi_a.k141_1283730                          I 2 C 0
s Ateles_marginatus.k141_970259                              51047 4 -     71267 T-CTA
i Ateles_marginatus.k141_970259                          I 4 C 0
s Ateles_paniscus.k141_866194                                25105 4 -     33135 T-CTA
i Ateles_paniscus.k141_866194                            I 2 C 0
s Cacajao_ayresi.k141_96119                                   9909 4 +     28062 C-CTA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45200 4 -     91139 C-CTA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22727 4 +     95584 C-CTA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22640 4 +    119600 C-CTA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12258 1 +     18648 ----A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11765 1 -     13885 ----A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3864 1 -      8861 ----A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456260 1 + 189096842 ----A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3780 1 +      8664 ----A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274273 4 +    496798 t-ctc
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Cebuella_niveiventris.k141_592277                           7175 1 -     12580 ----A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45230 1 +     53515 ----A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  375959 4 -  26074798 T-CTA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10029 4 -     34880 T-CTA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69126 4 -     89041 T-CTA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         1936 4 -     76265 T-CTC
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Cercocebus_atys.KQ010504.1                                143900 4 -   4669795 c-cta
i Cercocebus_atys.KQ010504.1                             C 0 I 14
s Cercocebus_chrysogaster.k141_1522556                       47639 4 +     47900 T-CTA
i Cercocebus_chrysogaster.k141_1522556                   C 0 I 8
s Cercocebus_lunulatus.k141_2500334                           3072 4 -     14410 C-CTA
i Cercocebus_lunulatus.k141_2500334                      C 0 I 14
s Cercocebus_torquatus.k141_2159127                          47454 4 -    148725 T-CTA
i Cercocebus_torquatus.k141_2159127                      C 0 I 14
s Cercopithecus_ascanius.k141_3120866                        29731 4 -     40656 T-CTA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9690 4 +     20796 T-CTA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14804 4 -     17524 C-CTG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30537 4 -     34525 T-CTA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14315 4 -     25376 T-CTA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366904 4 -  39242232 T-CTA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272629 4 +  21565898 T-CTA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        34996 4 -     45857 T-CTA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29897 4 -     32606 T-CTA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6056 4 +      8499 T-CTA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28457 4 +     70610 T-CTA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25419 4 +     36323 T-CTA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Cheracebus_lucifer.k141_2312002                            10995 4 -     32913 C-CTA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21408 4 -     40346 C-CTA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21662 4 +    216457 C-CTA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21452 4 +     39636 C-CTA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33403 4 -     52013 T-CTA
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44541 4 -    112038 C-CTA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10091 4 +     34062 C-CTA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346319 4 +  18827391 T-CTA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12858 4 -     44032 T-CTA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307705 4 - 135778131 t-cta
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             412114 4 -   2368649 t-cta
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      381996 4 - 200372422 T-CTA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5549 4 -     84244 T-CTA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Erythrocebus_patas.Contig38                               265847 4 +  21539334 T-CTA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Gorilla_beringei.k141_3218903                                622 4 -      2763 T-CTA
i Gorilla_beringei.k141_3218903                          C 0 I 89
s Gorilla_gorilla.LT578341.1                                259042 4 - 186649187 t-cta
i Gorilla_gorilla.LT578341.1                             C 0 I 89
s Hoolock_leuconedys.ctg274                                    145505 4 -    630532 T-CTA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hylobates_agilis.k141_1155965                               8552 4 +     12352 T-CTA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15739 4 +     55766 T-CTA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055267 4 + 191637585 T-CTA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804145 4 +  11177569 T-CTA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45368 4 +    110728 C-CTA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                         814 4 -     23187 T-TCT
i Leontocebus_fuscicollis.k141_3470480                   C 0 I 1
s Leontocebus_illigeri.k141_2759473                           1127 4 -     14280 T-TTA
i Leontocebus_illigeri.k141_2759473                      C 0 I 2
s Leontocebus_nigricollis.k141_1320036                         769 3 +      3713 T-CT-
i Leontocebus_nigricollis.k141_1320036                   C 0 I 1
s Leontopithecus_chrysomelas.k141_3286424                      957 1 +      8855 ----A
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5758 1 -     13645 ----A
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Lophocebus_aterrimus.ctg367                               336783 4 -   1826925 T-CTA
i Lophocebus_aterrimus.ctg367                            C 0 I 5
s Macaca_arctoides.k141_1757516                              48174 4 -     61512 T-CTA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375836 4 -  60120075 T-CTA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28104 4 +     30207 T-CTA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2942 4 -      5035 T-CTA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28057 4 +     30527 T-CTA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39233 4 -     50087 T-CTA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48978 4 +     51645 T-CTA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418180 4 - 187317192 t-cta
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402411 4 +  25927173 t-cta
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51582 4 -     62418 T-CTA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4113 4 +     14901 T-CTA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48055 4 +     59329 T-CTA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273962 4 +    668171 T-CTA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2594 4 -      5049 T-CTA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5761 4 +     17132 T-CTA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325250 4 +  24302211 T-CTA
i Mandrillus_leucophaeus.scaffold280                     C 0 I 8
s Mandrillus_sphinx.Contig270                               360081 4 -    752769 T-CTA
i Mandrillus_sphinx.Contig270                            C 0 I 8
s Mico_argentatus.k141_582562                                12367 1 +     17804 ----A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1180625                              12865 1 -     12984 ----A
i Mico_humeralifer.k141_1180625                          I 22 n 1
s Mico_schneideri.k141_1877700                                     21178 1 -     26561 ----A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25343 4 -     27822 T-CTA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Nasalis_larvatus.k141_1350636                              32128 4 +     34575 C-CTA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Nomascus_annamensis.k141_1771965                           56440 4 -    132029 T-CTA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12535 4 -     16345 T-CTA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18424 4 +     22201 T-CTA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416654 4 -  22158432 T-CTA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28829 4 -     54323 T-CTA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  402 3 +      1186 --cta
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.NBAG03003182.1                             16226 5 -     24457 ttcta
i Pan_troglodytes.NBAG03003182.1                         I 1058 I 451
s Papio_anubis.CM001495.2                                   246259 4 - 183742232 t-cta
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12544 4 +     21308 T-CTA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295287 4 -  20919399 T-CTA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25186 4 -     27687 T-CTA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1863 4 +     10553 T-CTA
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1824 4 -     10386 T-CTA
i Papio_ursinus.k141_5784434                             C 0 C 0
s Piliocolobus_badius.k141_2704958                            5509 4 +     55023 T-CTA
i Piliocolobus_badius.k141_2704958                       I 2 C 0
s Piliocolobus_gordonorum.k141_381342                         5032 4 -     89929 T-CTA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5620 4 +     40849 T-CTA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257349 4 +  14605196 t-cta
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1239476                             66887 4 +    207309 C-CTA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7982 4 -     25401 C-CTA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33728 4 +     58159 C-CTA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34004 4 +     63561 C-CTA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33759 4 +     51148 C-CTA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558735 4 -   4542175 C-CTA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33743 4 +     51125 C-CTA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10167 4 +     39866 C-CTA
i Plecturocebus_bernhardi.k141_2549090                   I 2 C 0
s Plecturocebus_brunneus.k141_862875                          5249 4 -      9282 C-CTA
i Plecturocebus_brunneus.k141_862875                     I 2 C 0
s Plecturocebus_caligatus.k141_1382851                       44653 4 -     87950 C-CTA
i Plecturocebus_caligatus.k141_1382851                   I 2 C 0
s Plecturocebus_cinerascens.k141_1164729                     45047 4 -     88961 C-CTA
i Plecturocebus_cinerascens.k141_1164729                 I 2 C 0
s Plecturocebus_cupreus.k141_2351393                          9745 4 -     39403 C-CTA
i Plecturocebus_cupreus.k141_2351393                     I 2 C 0
s Plecturocebus_dubius.k141_1058799                          44697 4 +     87928 C-CTA
i Plecturocebus_dubius.k141_1058799                      I 2 C 0
s Plecturocebus_grovesi.k141_2013005                          9744 4 -     60166 C-CTA
i Plecturocebus_grovesi.k141_2013005                     I 2 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16665 4 -     67232 C-CTA
i Plecturocebus_hoffmannsi.k141_3303950                  I 2 C 0
s Plecturocebus_miltoni.k141_349282                          44597 4 -     90634 C-CTA
i Plecturocebus_miltoni.k141_349282                      I 2 C 0
s Plecturocebus_moloch.k141_1031110                          46064 4 +     89403 C-CTA
i Plecturocebus_moloch.k141_1031110                      I 2 C 0
s Pongo_abelii.CM009266.2                                   182208 4 - 189387572 t-cta
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196951 4 -   9816681 T-CTA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30708 3 +     69807 --CTA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47890 4 -     80239 C-CTA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Pygathrix_cinerea.k141_1153803                             30075 4 +     91421 C-CTA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156626 4 -   7812017 C-CTA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10926 4 +     72585 C-CTA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4533 4 +      7119 C-CTA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125203 4 + 195417433 C-CTA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239375 4 -   7961872 C-CTA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saguinus_bicolor.k141_161125                                9300 4 +     12412 T-CTA
i Saguinus_bicolor.k141_161125                           I 5 C 0
s Saguinus_geoffroyi.k141_356064                               757 4 +      9876 T-CTA
i Saguinus_geoffroyi.k141_356064                         I 5 C 0
s Saguinus_imperator.k141_2710097                            16362 4 -     24931 T-CTA
i Saguinus_imperator.k141_2710097                        I 6 C 0
s Saguinus_inustus.k141_4502137                               1241 4 +      4564 T-CTA
i Saguinus_inustus.k141_4502137                          I 5 C 0
s Saguinus_labiatus.k141_264497                               4046 4 -      7443 T-CTA
i Saguinus_labiatus.k141_264497                          I 5 C 0
s Saguinus_midas.LG03                                       394953 4 - 209938924 T-CTA
i Saguinus_midas.LG03                                    I 5 C 0
s Saguinus_mystax.k141_6319370                                1663 4 +     10149 T-CTA
i Saguinus_mystax.k141_6319370                           I 7 C 0
s Saguinus_oedipus.k141_1368863                                998 4 +     10417 T-CTA
i Saguinus_oedipus.k141_1368863                          I 5 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111127 4 + 121099817 t-cta
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32696 4 -     47369 T-CTA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33079 4 -     79414 T-CTA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29770 4 -     34454 T-CTA
i Saimiri_oerstedii.k141_245838                          I 2 C 0
s Saimiri_sciureus.k141_1467173                              17172 4 -     22428 T-CTA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32326 4 -     47109 T-CTA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240349 4 +   5703754 T-CTA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9940 4 +     21866 T-CTA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Semnopithecus_entellus.k141_583282                          1514 4 +     11297 C-CTA
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31907 4 +     58920 C-CTA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18405 4 -     45317 C-CTA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26063 4 -     42441 C-CTA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28739 4 -     29113 C-CTA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31816 4 -     48123 C-CTA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393911 4 +   1523678 T-CTA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tarsius_lariang.k141_1733899                                4464 4 +      9917 T-CTC
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11260 4 +     20590 T-CTC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356070 4 - 186847797 t-cta
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Trachypithecus_auratus.k141_1189070                        23816 4 +     26378 C-CTA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36614 4 -     78344 C-CTA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23141 4 +     25722 C-CTA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31570 4 -     62838 C-CTA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31561 4 +     46913 C-CTA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12299 4 -     28527 C-CTA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33501 4 -     64340 C-CTA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31539 4 -     63452 C-CTA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12990 4 +     22490 C-CTA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          956 4 +      9911 C-CTA
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          751 4 -     33539 C-CTA
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258510 4 -   6242583 C-CTA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4529 4 +     19340 C-CTA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
e Fukomys_damarensis.KN121974.1                            2925965 0 -   3816255 C
e Myocastor_coypus.MyoCoy_scaffold_57531                      1060 0 -     27262 C
e Sorex_araneus.JH798187.1                                 4674412 0 +  18376816 C
e Erinaceus_europaeus.JH835339.1                           3671357 0 +   7059049 C
e Crocidura_indochinensis.CroInd_scaffold_77846              12402 3 +     12657 I
e Capromys_pilorides.CapPil_scaffold_26391                    1997 0 -     20114 C
e Nannospalax_galili.KL204047.1                             950156 17 +   3037898 I
e Dasyprocta_punctata.DasPun_flattened_line_15900            31597 0 +     75252 C
e Chrysochloris_asiatica.ChrAsi_scaffold_510450               2246 0 -      4087 C
e Thryonomys_swinderianus.ThrSwi_scaffold_33457              27703 0 -     33621 C
e Petromus_typicus.PetTyp_scaffold_17301                     35424 4 -     56120 I
e Perognathus_longimembris.PerPac_flattened_line_89005        7441 0 +      9367 C
e Octodon_degus.JH651603.1                                11059328 0 -  11899542 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75345 0 +    143317 C
e Heterocephalus_glaber.JH602082.1                         1938404 0 -  22651954 C
e Dolichotis_patagonum.DolPat_scaffold_80628                 12730 0 +     14636 C
e Dipodomys_stephensi.DipSte_scaffold_77284                    844 0 +     14058 C
e Dipodomys_ordii.KN672350.1                              18955232 0 -  37912305 C
e Cuniculus_paca.CunPac_flattened_line_7025                  12157 0 +     36344 C
e Ctenomys_sociabilis.CteSoc_scaffold_30159                  22669 0 +     50838 C
e Cavia_tschudii.CavTsc_scaffold_8919                          295 0 -    143979 C
e Cavia_porcellus.DS562891.1                               5003407 0 +  23407841 C
e Cavia_aperea.AVPZ01000300.1                              4999966 0 +  23392119 C
e Microgale_talazaci.MicTal_scaffold_6613                    49535 0 +    145209 C
e Echinops_telfairi.JH980293.1                            62858360 0 - 111700974 C
e Orycteropus_afer.OryAfe_flattened_line_201229               2878 0 +     11607 C
e Elephantulus_edwardii.JH947257.1                         9113409 0 -  10337057 C
e Desmodus_rotundus.KZ672289.1                            11868862 0 -  20541912 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Choloepus_hoffmanni.KN194906.1                            609499 0 -    839153 C
e Choloepus_didactylus.ChoDid_scaffold_147047                 2022 0 +     10270 C
e Tolypeutes_matacus.TolMat_scaffold_31955                   22436 0 -     31044 C
e Dasypus_novemcinctus.JH564415.1                          2112701 0 -   2246927 C
e Chaetophractus_vellerosus.ChaVel_scaffold_15563            15343 0 -     19938 C
e Lepus_americanus.LepAme_scaffold_56121                     21873 0 +     24238 C
e Carollia_perspicillata.CarPer_scaffold_107871               3870 0 +      9923 C
e Tupaia_tana.TupTan_flattened_line_394                      13501 0 -     70247 C
e Tupaia_chinensis.KB320699.1                              1839408 0 -   4065304 C
e Zalophus_californianus.ZalCal_flattened_line_17732         32330 0 -     86975 C
e Vulpes_lagopus.VulLag_flattened_line_12041                108679 1 -    112863 I
e Ursus_maritimus.KK499267.1                                185327 0 +   5085361 C
e Spilogale_gracilis.SpiGra_flattened_line_13525             16127 0 -     97271 C
e Pteronura_brasiliensis.PteBra_flattened_line_48144          7902 0 -     18639 C
e Otocyon_megalotis.JAEUCK010005147.1                        42735 1 +    559221 I
e Odobenus_rosmarus.KB229312.1                             1455124 0 +   2017862 C
e Nyctereutes_procyonoides.CAJHUB010000658.1                201785 1 +   9404916 I
e Neomonachus_schauinslandi.NINY01007730.1                11469355 0 -  31847680 C
e Mustela_putorius.JH418006.1                             14358293 0 +  14710649 C
e Mirounga_angustirostris.MirAng_flattened_line_54046        11908 0 +     27589 C
e Mellivora_capensis.MelCap_flattened_line_19308             29418 0 -     74585 C
e Lycaon_pictus.CM007581.1                                41618081 1 +  59628241 I
e Leptonychotes_weddellii.KB714746.1                        816675 0 -   3914936 C
e Enhydra_lutris.KZ291758.1                               24925405 0 +  41312741 C
e Canis_lupus_orion.HG994398.1                            45110507 1 -  63665305 I
e Canis_lupus_familiaris.chr16                            41618926 1 +  59632846 I
e Canis_lupus_dingo.QKWQ01000480.1                          225789 1 +   9314153 I
e Canis_lupus_VD.CanFam_VD_scaffold_35101                    12448 1 -     23171 I
e CanFam4.chr16                                           42508813 1 +  60362399 I
e Artibeus_jamaicensis.ArtJam_scaffold_73666                  8996 0 -     15198 C
e Ailurus_fulgens.LNAC01001112.1                            218868 3 +    347723 I
e Ailuropoda_melanoleuca.LNAT01000098.1                   20418873 0 +  29979442 C
e Ziphius_cavirostris.ZipCav_flattened_line_334639             974 0 +      3447 C
e Zapus_hudsonius.ZapHud_scaffold_11398                       4514 0 -     63895 C
e Xerus_inauris.XerIna_scaffold_2302                        177875 0 -    224448 C
e Vicugna_pacos.KN270157.1                                   80153 42 +   5488506 I
e Uropsilus_gracilis.UroGra_scaffold_46687                    7206 0 -     21056 C
e Tursiops_truncatus.MRVK01000835.1                       17369013 0 -  33153633 C
e Trichechus_manatus.JH594705.1                            6485449 0 -  10818551 C
e Tragulus_javanicus.TraJav_scaffold_3462                   177645 0 -    200418 C
e Tonatia_saurophila.TonSau_scaffold_294                    483771 0 -    610378 C
e Tapirus_terrestris.TapTer_scaffold_755                    108841 0 -    539355 C
e Tapirus_indicus.TapInd_scaffold_7432                      194861 0 +    199430 C
e Tadarida_brasiliensis.TadBra_scaffold_54991                17464 0 +     22964 C
e Sus_scrofa.CM000828.4                                    6648028 0 +  69701581 C
e Suricata_suricatta.SurSur_flattened_line_6629             128754 44 +    196729 I
e Spermophilus_dauricus.KZ294078.1                         1872004 0 +   3870691 C
e Solenodon_paradoxus.SolPar_flattened_line_126            1867168 0 -   1910179 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    52716 15 +     77746 I
e Scalopus_aquaticus.ScaAqu_scaffold_662                    122419 0 +    313613 C
e Saiga_tatarica.SaiTat_scaffold_39512                       14386 0 +     16473 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78878 1 -    116970 I
e Rhinolophus_sinicus.LVEH01000134.1                       2917994 0 +   3329780 C
e Rattus_norvegicus.chr16                                 37025869 17 -  90668790 I
e Rangifer_tarandus.RanTarSib_scaffold_29737                  4935 0 -     55207 C
e Puma_concolor.QAVW01001104.1                            18102593 0 +  38429054 C
e Pteropus_vampyrus.KN525825.1                             3540577 0 -   4952924 C
e Pteropus_alecto.KB030862.1                               5844061 0 -  28871421 C
e Pteronotus_parnellii.KE847780.1                            55511 6 -     66298 I
e Psammomys_obesus.NESX01036366.1                            40662 17 +     52041 I
e Procavia_capensis.ProCapCap_scaffold_128773                 2641 0 -     12774 C
e Platanista_gangetica.PlaMin_flattened_line_83166            4431 0 +     19503 C
e Pipistrellus_pipistrellus.PipPip_scaffold_46974             7738 5 +     22231 I
e Phocoena_phocoena.PhoPho_flattened_line_24159               7410 0 -     63832 C
e Peromyscus_maniculatus.KI615324.1                         250931 17 +  18517816 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18544 0 +     78924 C
e Pantholops_hodgsonii.KE114653.1                          1622334 0 +   2937107 C
e Panthera_tigris.KE722367.1                               3976203 5 +   8748460 I
e Panthera_pardus.KV860321.1                              18465607 0 -  18783137 C
e Panthera_onca.PanOnc_flattened_line_3271                   28375 0 -    230217 C
e Ovis_canadensis.OviCan_scaffold_67953                      11439 0 +     17875 C
e Ovis_aries.CM001607.2                                   26410816 0 -  44047080 C
e Oryctolagus_cuniculus.CM000791.1                       107108534 0 - 174332312 C
e Orcinus_orca.KB316932.1                                  8105889 0 +  10937097 C
e Onychomys_torridus.OnyTor_scaffold_28377                    7712 17 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    97170 17 -    140218 I
e Okapia_johnstoni.LVCL01S0005463.1                          22074 0 +    150152 C
e Odocoileus_virginianus.KZ100018.1                         442417 0 -    630418 C
e Noctilio_leporinus.NocLep_scaffold_7894                   131186 3 -    149072 I
e Neophocaena_asiaeorientalis.KZ687982.1                   1235484 1 -   7148211 I
e Myotis_myotis.MyoMyo_scaffold_66571                         6252 0 +     18357 C
e Myotis_lucifugus.GL429869.1                               387465 0 +   4330536 C
e Myotis_davidii.KB100139.1                                4391426 0 +   6019432 C
e Myotis_brandtii.KE162005.1                               9797252 0 +  10118263 C
e Muscardinus_avellanarius.MusAve_scaffold_5560               2968 0 -    124358 C
e Mus_spretus.CM004101.1                                  39500209 17 + 130317789 I
e Mus_pahari.LT608297.1                                   58219252 17 +  89631738 I
e Mus_musculus.chr8                                       41691290 17 + 129401213 I
e Mus_caroli.LT608237.1                                   35597750 17 + 120012414 I
e Murina_feae.MurFea_scaffold_17764                          45247 0 +     47283 C
e Mungos_mungo.MunMun_flattened_line_18455                   21905 17 -     63510 I
e Moschus_moschiferus.MosMos_scaffold_13123                  32021 0 -     82753 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 182857 0 +    366855 C
e Monodon_monoceros.MonMon_M_scaffold_103                   362818 0 +    437263 C
e Miniopterus_schreibersii.MinSch_scaffold_23309             45992 1 -     48117 I
e Miniopterus_natalensis.LDJU01000034.1                    6368261 1 -   8254450 I
e Microtus_ochrogaster.CM001695.1                         15966555 17 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_2233                188442 0 +    200668 C
e Mesoplodon_bidens.MesBid_scaffold_6114                     90710 0 +     93471 C
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53128 17 -    140813 I
e Megaderma_lyra.MegLyr_scaffold_4542                       153839 0 +    207569 C
e Marmota_marmota.CZRN01000018.1                           7504641 0 +  40650429 C
e Manis_pentadactyla.KN006162.1                             224017 6 +    317179 I
e Manis_javanica.JSZB01003497.1                             676720 6 -    737560 I
e Macroglossus_sobrinus.MacSob_scaffold_4024                226445 0 -    270270 C
e Loxodonta_africana.GL010049.1                           39087841 0 +  43346337 C
e Lipotes_vexillifer.KE559953.1                             344426 0 +    662738 C
e Lasiurus_borealis.LasBor_scaffold_61236                     1318 0 -     25587 C
e Kogia_breviceps.KogBre_flattened_line_3970                 75082 0 -     97402 C
e Jaculus_jaculus.JH725527.1                               1242770 296 +   9596543 I
e Inia_geoffrensis.IniGeo_flattened_line_69447               13244 0 -     16823 C
e Ictidomys_tridecemlineatus.JH393364.1                     390441 0 +   7955117 C
e Hystrix_cristata.HysCri_scaffold_5660                      11219 0 -    135385 C
e Hyaena_hyaena.HyaHya_flattened_line_14808                  73786 3 +     83186 I
e Hipposideros_galeritus.HipGal_scaffold_363447                591 0 +       852 C
e Hipposideros_armiger.JXIK01000431.1                      1556222 0 -   1711038 C
e Hippopotamus_amphibius.HipAmp_scaffold_38803               11177 0 -     36432 C
e Heterohyrax_brucei.HetBruBak_scaffold_116546                6109 0 +      8654 C
e Hemitragus_hylocrius.HemHyl_scaffold_35685                 15790 0 +     48891 C
e Helogale_parvula.HelPar_flattened_line_2585                34156 17 -    327341 I
e Graphiurus_murinus.GraMur_scaffold_10447                    6870 0 -     78134 C
e Glis_glis.GliGli_scaffold_163929                            4955 0 -      6791 C
e Giraffa_tippelskirchi.LVKQ01S007888.1                       2123 0 +    660261 C
e Galeopterus_variegatus.GalVar_scaffold_51812                4937 0 -     28519 C
e Felis_nigripes.FelNig_flattened_line_44075                   967 0 +     25330 C
e Felis_catus_fca126.CM031415.1                          185120325 0 - 205367284 C
e Eubalaena_japonica.EubJap_flattened_line_57114              2065 0 +     25849 C
e Eschrichtius_robustus.EscRob_flattened_line_8968           74350 3 -    133382 I
e Equus_przewalskii.KK951119.1                              415052 0 -    498745 C
e Equus_caballus.CM000403.2                               21379070 0 +  39960074 C
e Equus_asinus.JREZ01000139.1                              3045140 0 -   4378816 C
e Eptesicus_fuscus.JH977646.1                             12582631 0 +  14770903 C
e Ellobius_talpinus.LOJH01026522.1                           17069 17 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          35140 17 +    110024 I
e Elaphurus_davidianus.JRFZ01104969.1                       245865 0 -    607251 C
e Eidolon_helvum.AWHC01266696.1                               9511 0 +     19438 C
e Diceros_bicornis.DicBicMic_scaffold_5955                  142476 0 -    198055 C
e Dicerorhinus_sumatrensis.PEKH010002091.1                  667674 0 -   1390856 C
e Delphinapterus_leucas.KZ290073.1                        18635140 0 -  35494412 C
e Ctenodactylus_gundi.CteGun_scaffold_65                    650024 3 -   1526836 I
e Cryptoprocta_ferox.CryFer_flattened_line_16129              7754 0 +     87169 C
e Cricetulus_griseus.LT883664.1                          213118941 17 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 47428 16 -     83289 I
e Craseonycteris_thonglongyai.CraTho_scaffold_120505          6150 0 -      8242 C
e Condylura_cristata.JH655891.1                           35810590 0 +  53390261 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22236 0 +     27315 C
e Catagonus_wagneri.CatWag_scaffold_2839                     83076 0 -    217609 C
e Castor_canadensis.CasCan_scaffold_39952                    31568 0 -     39886 C
e Capra_hircus.CM004588.1                                 26598076 0 +  44709034 C
e Capra_aegagrus.CM003241.1                               27416079 0 -  46296322 C
e Camelus_ferus.KB017975.1                                 1212778 42 +   1652518 I
e Camelus_dromedarius.KN272107.1                           4669080 42 +   7040546 I
e Camelus_bactrianus.KN276810.1                            7634779 42 +  17673402 I
e Bubalus_bubalis.KI419123.1                               1536231 0 -   4408762 C
e Bos_taurus.CM000203.6                                   27559550 0 -  45695690 C
e Bos_mutus.JH880303.1                                      769005 0 +   1948126 C
e Bos_indicus.CM003047.1                                  28423404 0 -  48749331 C
e Bison_bison.KN261452.1                                     36264 0 +    288883 C
e Beatragus_hunteri.BeaHun_scaffold_7278                     93065 0 +    124022 C
e Balaenoptera_bonaerensis.DF411050.1                         3237 3 -     25979 I
e Balaenoptera_acutorostrata.KI537508.1                    7966736 3 -  23207421 I
e Aplodontia_rufa.AprRuf_scaffold_46868                      27337 0 -     32367 C
e Antilocapra_americana.AntAmePen_scaffold_21030             53231 0 -     68529 C
e Anoura_caudifer.AnoCau_scaffold_1412                      180482 0 -    412891 C
e Ammotragus_lervia.NIVO01071767.1                         1592075 0 +   2318259 C
e Allactaga_bullata.AllBul_scaffold_20030                    21217 300 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28733 17 +     63021 I
e Acinonyx_jubatus.LLWD01001279.1                           816367 0 +   1699592 C

a score=0.000000
s hg38.chrUn_KI270755v1                                       9876 89 +     36723 CCT----CTTCT----A------CTTCTACGTTTTAAGAGC-TCTGTA-GCTTA----GT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---GT----G-ACAC-AACTAGTC-TT--GAAATGTTG
s Acinonyx_jubatus.LLWD01001279.1                           816367 88 +   1699592 -CT----CCTCC----A------CCCCTACATTTTGAGGGT-TCTGTA-GCTTA----AG-GAG---CTTC-CAAGCT---TATG----TG---CA--CT---GC----A-GCAC-AGctatcc-ct-g-aaatgcag
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418873 88 +  29979442 -CT----CCTCC----A------CTTCTACATTTTGAGGGT-TCTGTA-GCTTC----AA-GAG---TTTC-CAAGCT---TCTA----TG---TA--CC---CC----A-ACAC-TGCTACCA-CT-G-GAATGCAG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            218871 88 +    347723 -ct----cctcc----a------ctcCTACATTTTGAGGAT-TCTGCA-CCTTA----AA-GAG---TTTC-CAAGCT---TACA----TG---CA--CC---CC----A-ACAT-TGCTACCA-CT-G-GAATGCAG
i Ailurus_fulgens.LNAC01001112.1                         I 3 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50821 88 +     53615 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----A-ACAC-AGCTAGTC-TT--GAAATGGTG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2848 88 +     13857 CCT----CCTCT----A------CTTCTACGTTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19404 88 -     21945 CCT----CCTCT----A------CTTCTACGTTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21089 88 +     32033 CCT----CCTCT----A------CTTCTACGTTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74349 83 -     84148 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGTTG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46593 83 -     78289 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGTTG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46019 83 +     55831 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGTTG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44481 83 -     64179 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGTTG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1588 83 -      3959 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGTTG
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43106 83 +     45454 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGTTG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48755 83 +     70886 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGTTG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             10925 83 +     30854 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGTTG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35061 83 +     42133 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGTTG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592075 89 +   2318259 -CT----CCTTC----A------TGCCTACAATTTGAGGAT-TCTGTAACTCTA----AA-AAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAGCT-CT-G-GACTGCAG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180482 88 -    412891 -CT----TCCCC----A------CTCCTACAATACGAGGGT-CCTGTA-GTTTG----AA-GAA---CTCC-CAAGCT---TGTA----AG---CG--AA---CT----G-ACAC-ATGCAGCC-CT-G-GAATGCAG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53231 89 -     68529 -CT----CCTTC----A------TGCCTACAATTTGAGGAT-TCTGTAAGTCTA----AA-AAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAGTC-CT-G-GACTGCAG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3266 83 +     17741 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TCTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGGATGTTG
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3891 83 -     15923 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TCTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGGATGTTG
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674173 83 +   5030052 cct----ctgcT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TCTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGGATGTTG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4167 83 -     16391 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TCTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGGATGTTG
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3726 83 -     17186 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TCTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGGATGTTG
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27337 85 -     32367 -AT----CCTTT----A------C---TAAAGTTTGAGGGC-TCTGTA-GCTTA----AT-GAA---CCCT-TGAACT---TACA--CACA---C----T---CT----G-ATAC-AGCTACCC-CT-G-GAACATAA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  8996 88 -     15198 -CT----TCCCC----A------CTCCTACAATAGGAGCGT-CCTGTA-GTTTA----AA-GAA---CTCC-CAAGCT---CGTA----AG---CA--TC---CT----A-ACAC-ATCCAGCC-TT-G-GAATGCAG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276824 83 +  21539123 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-AAAC-AGCTAGTC-TT--GGAATGTTG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              12989 83 +     48076 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-AAAC-AGCTAGTC-TT--GGAATGTTG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8125 83 -     28759 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-AAAC-AGCTAGTC-TT--GGAATGTTG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35681 83 +     44353 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-AAAC-AGCTAGTC-TT--GGAATGTTG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51051 83 -     71267 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-AAAC-AGCTAGTC-TT--GGAATGTTG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25109 83 -     33135 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-AAAC-AGCTAGTC-TT--GGAATGTTG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966739 77 -  23207421 --------------------------CTACAATTTGAGGGT-TCTGTA-GTTTA----AA-GAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACCC-AGGTAGCC-CT-G-GATTGCAG
i Balaenoptera_acutorostrata.KI537508.1                  I 3 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3240 77 -     25979 --------------------------CTACAATTTGAGGGT-TCTGTA-GTTTA----AA-GAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACCC-AGGTAGCC-CT-G-GATTGCAG
i Balaenoptera_bonaerensis.DF411050.1                    I 3 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93065 88 +    124022 -CT----CCTTC----A------TGCCTACAATTTGAGGAT-TCTGTAACTCTA----AA-AA----CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAGCC-CT-G-GACTGCAG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36264 88 +    288883 -CT----CCTTC----A------TGCCTACAATTTGAGGAT-TCTGTAAGTCTA----A--AAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCCAgcc-ct-g-gactgcag
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423404 89 -  48749331 -CT----CCTTC----A------NNCCTACAATTTGAGGAT-TCTGTAAGTCTA----AA-AAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCCAgcc-ct-g-gactgcag
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      769005 89 +   1948126 -CT----CCTTC----A------TGCCTACAATTTGAGGAT-TCTGTAAGTCTA----AA-AAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAgcc-ct-g-gactgcag
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559550 89 -  45695690 -CT----CCTTC----A------CGCCTACAATTTGAGGAT-TCTGTAAGTCTA----AA-AAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCCAgcc-ct-g-gactgcag
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536231 89 -   4408762 -CT----CCTTC----A------TGCCTACAGTTTGAGGAT-TATGTAAGTCTA----AA-AAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTGgcc-ct-g-gactgcag
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9913 83 +     28062 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGCTG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45204 83 -     91139 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGCTG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22731 83 +     95584 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGCTG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22644 83 +    119600 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGCTG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12259 82 +     18648 CCT----CTGCT----C------------CATTTTAAGAGC-TCTGTA-GCTGA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---T-----G-ACAC-AGCTAGTG-TT--GGGATGTTG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11766 82 -     13885 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----GT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---C-----G-ACGC-AGCTGGTC-TT--GGGATGTTG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3865 82 -      8861 CCT----CTGCT----C------------CATTTTAAGAGC-TCTGTA-GCTGA----AT-GAG---CTCT-CAGGCT---TATG----AA---CA--CC---C-----G-ACAC-AGCTAGTG-TT--GGGATGTTG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456261 82 + 189096842 CCT----CTGCT----C------------CATTTTAAGAGC-TCTGTA-GCTGA----AT-GAG---CTCT-CAGGCT---TATG----AA---CA--CC---C-----G-ACAC-AGCTAGTG-TT--GGGATGTTG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3781 82 +      8664 CCT----CTGCT----C------------CATTTTAAGAGC-TCTGTA-GCTGA----AT-GAG---CTCT-CAGGCT---TATG----AA---CA--CC---C-----G-ACAC-AGCTAGTG-TT--GGGATGTTG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7634821 38 +  17673402 ----------------------------------------------------------------------------CT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAGCC-CT-G-GTATGCAG
i Camelus_bactrianus.KN276810.1                          I 42 C 0
s Camelus_dromedarius.KN272107.1                           4669122 38 +   7040546 ----------------------------------------------------------------------------CT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAGCC-CT-G-GTATGCAG
i Camelus_dromedarius.KN272107.1                         I 42 C 0
s Camelus_ferus.KB017975.1                                 1212820 38 +   1652518 ----------------------------------------------------------------------------CT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAGCC-CT-G-GTATGCAG
i Camelus_ferus.KB017975.1                               I 42 C 0
s CanFam4.chr16                                           42508814 86 +  60362399 -CT----CCTCC----A------TTCTTACATTTTGAGGGT-ACTATA-GCTTA----AA-GAG---CTTC-CAAGCT---TATG----TG---CG--CC---CC----A---AC-TGCTATCA-CT-A-GAATGCAG
i CanFam4.chr16                                          I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12449 86 -     23171 -CT----CCTCC----A------TTCTTACATTTTGAGGGT-ACTATA-GCTTA----AA-GAG---CTTC-CAAGCT---TATG----TG---CG--CC---CC----A---AC-TGCTATCA-CT-A-GAATGCAG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 1 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225790 86 +   9314153 -CT----CCTCC----A------TTCTTACATTTTGAGGGT-ACTATA-GCTTA----AA-GAG---CTTC-CAAGCT---TATG----TG---CG--CC---CC----A---AC-TGCTATCA-CT-A-GAATGCAG
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 C 0
s Canis_lupus_familiaris.chr16                            41618927 86 +  59632846 -CT----CCTCC----A------TTCTTACATTTTGAGGGT-ACTATA-GCTTA----AA-GAG---CTTC-CAAGCT---TATG----TG---CG--CC---CC----A---AC-TGCTATCA-CT-A-GAATGCAG
i Canis_lupus_familiaris.chr16                           I 1 C 0
s Canis_lupus_orion.HG994398.1                            45110508 86 -  63665305 -CT----CCTCC----A------TTCTTACATTTTGAGGGT-ACTATA-GCTTA----AA-GAG---CTTC-CAAGCT---TATG----TG---CG--CC---CC----A---AC-TGCTATCA-CT-A-GAATGCAG
i Canis_lupus_orion.HG994398.1                           I 1 C 0
s Capra_aegagrus.CM003241.1                               27416079 89 -  46296322 -CT----CCTTC----A------TGCCTACAATTTGAGGAT-TCTGTAACTCTA----AA-AAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAgcc-ct-g-gactgcag
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598076 89 +  44709034 -CT----CCTTC----A------TGCCTACAATTTGAGGAT-TCTGTAACTCTA----AA-AAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAgcc-ct-g-gactgcag
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    1997 59 -     20114 -CT----GCTAC----A------TTTCTACGATTTGAGTAT-ATTAGA-GCATT----AT-GAG---CTCT-TGAACT---TACA----TG---C-------------------------------------------
i Capromys_pilorides.CapPil_scaffold_26391               C 0 I 28
s Carlito_syrichta.NW_007259797.1                           274277 89 +    496798 cct----cattc----A------CTTCTACAATTTGAAGAC-TCTGTG-GCTTA----AT-GAG---CTCC-TAGGCT---CATG----AA---CA--TC---CT----G-ACAC-AACTAGTT-CT--GGAATGCAG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               3870 88 +      9923 -CT----TCCCC----A------CTCCTACAACACGAGGGT-CCTGTA-GCTTA----AA-GAA---CTCC-CAAGCT---TGTA----AG---CG--TC---CC----G-ACTC-GTCCAGCC-CT-G-GAATGCAG
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31568 11 -     39886 -CC----CCCCC----A------CGC----------------------------------------------------------------------------------------------------------------
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83076 92 -    217609 -CTTTGTCTTCC----A------CTCCTGCAATTCAAAGGT-TTTGCA-GTTTA----AA-GAG---CCCC-CAAGCT---TATT----AG---CA--CC---CT----C-ACAT-AGCTAGCC-CT-G-GAATGTAG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              4999966 59 +  23392119 -ct----cctcc----a------ttcCAACAACTTGAGGGT-ATTGTA-GCTTT----AT-GAG---CTCT-TGAACT---TGTA----TG---C-------------------------------------------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 29
s Cavia_porcellus.DS562891.1                               5003407 59 +  23407841 -ct----cctcc----a------ttcCTACAACTTGAGGGT-ATTGTA-GCTTT----GT-GAG---CTCT-TGAACT---TGTA----TG---C-------------------------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 29
s Cavia_tschudii.CavTsc_scaffold_8919                          295 56 -    143979 -C-------TCC----A------TTCCTACAACTTGAGGGT-ATTGTA-GCTTT----GT-GAG---CTCT-TGAACT---TGTA----TG---C-------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 29
s Cebuella_niveiventris.k141_592277                           7176 82 -     12580 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTGA----AT-GAG---CTCC-CAAGCT---TATG----AA---CA--CC---C-----G-ACAC-AGCTAGTG-TT--GGGATGTTG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45231 82 +     53515 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTGA----AT-GAG---CTCC-CAAGCT---TATG----AA---CA--CC---C-----G-ACAC-AGCTAGTG-TT--GGGATGTTG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  375963 83 -  26074798 CCT----CCGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGGATGTTG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10033 83 -     34880 CCT----CCGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGGATGTTG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69130 83 -     89041 CCT----CCGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGGATGTTG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         1940 89 -     76265 CCT----CATTC----A------CTTCTACAATTTGAAGAC-TCTGTG-GCTTA----AT-GAG---CTCC-TAGGCT---CATG----AA---CA--TC---CT----G-ACAC-AACTAGTT-CT--GGAATGCAG
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495403 88 -  27778364 -ct----cctcc----a------ctcctaCAGTTTGAGGGT-TGTGTC-GTTGA----AA-AAG---CTTC-AGAGCT---TACA----AG---CA--CC---CT----G-ACAT-AGCCAGCC-CC-G-GAATGCAG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22236 88 +     27315 -CT----CCTCC----A------CTCCTACAGTTTGAGGGT-TGTGTC-GTTGA----AA-AAG---CTTC-AGAGCT---TACA----AG---CA--CC---CT----G-ACAT-AGCCAGCC-CC-G-GAATGCAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143918 74 -   4669795 ----------------------------ACATGT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Cercocebus_atys.KQ010504.1                             I 14 C 0
s Cercocebus_chrysogaster.k141_1522556                       47651 74 +     47900 ----------------------------ACATTT-AAGAGC-TCTGTG-GCTTA----AC-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GACATGGTG
i Cercocebus_chrysogaster.k141_1522556                   I 8 C 0
s Cercocebus_lunulatus.k141_2500334                           3090 74 -     14410 ----------------------------ACATGT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Cercocebus_lunulatus.k141_2500334                      I 14 C 0
s Cercocebus_torquatus.k141_2159127                          47472 74 -    148725 ----------------------------ACATGT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Cercocebus_torquatus.k141_2159127                      I 14 C 0
s Cercopithecus_ascanius.k141_3120866                        29735 88 -     40656 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TACG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAGATGGTG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9694 88 +     20796 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----A-ACAC-AGCTAGTC-TT--GAGATGGTG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14808 88 -     17524 CCT----CTTCT----G------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----CT-GAG---CTCC-GAGGCT---TATG----GA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAGATGGCG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30541 88 -     34525 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AG---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAGTGGTG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14319 88 -     25376 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-GCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TACG----AA---CA--CC---CC----G-ACAC-AGCTAGCC-TT--GAGATGGTG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366908 88 -  39242232 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TACG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAGATGGTG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272633 88 +  21565898 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-GCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TACG----AA---CA--CC---CC----G-ACAC-AGCTAGCC-TT--GAGATGGTG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35000 88 -     45857 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGCC-TT--GAGATGGTG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29901 88 -     32606 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAGATGGTG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6060 88 +      8499 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TACG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAGATGGTG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28461 88 +     70610 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TACG----AA---CA--CC---CC----G-ACAC-AGCTAGCC-TT--GAGATGGTG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25423 88 +     36323 CCT----CTTCT----G------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----CT-GAG---ATCC-CCGGCT---TATG----GA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAGATGGCG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15343 56 -     19938 -TT----CCTCC----A------CTCCGGCCATTTGAGGGT-TCAGTG-GCTGA----AA-GAG---CTAG-AGAGCT---TGTG-----------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 15
s Cheracebus_lucifer.k141_2312002                            10999 83 -     32913 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TACG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TC--GGAATGCTG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21412 83 -     40346 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TACG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TC--GGAATGCTG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21666 83 +    216457 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TACG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TC--GGAATGCTG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21456 83 +     39636 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TACG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TC--GGAATGCTG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33407 80 -     52013 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---GATG----AA---CA--CC---C-----G-ACAC-AG--AGTC-TT--GGGATGTTG
i Chiropotes_albinasus.k141_1091259                      C 0 I 142
s Chiropotes_israelita.k141_313004                           44545 83 -    112038 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGCTG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10095 83 +     34062 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGCTG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346323 88 +  18827391 CCT----CCTCT----A------CTTCTACGTTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12862 88 -     44032 CCT----CCTCT----A------CTTCTACGTTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307709 88 - 135778131 cct----cctCT----A------CTTCTACGTTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2022 58 +     10270 -TT----CCTGT----A------CTCCTACAATTTCAGGGT-TCAGTG-GTTTA----AA-GAG---CTAG-TGAGTT---TGCA----AG-----------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 I 30
s Choloepus_hoffmanni.KN194906.1                            609499 58 -    839153 -tt----cctgt----a------CTCCTACAATTTCAGGGT-TCAGTG-GTTTA----AA-GAG---CTAG-TGAGTT---TGCA----AG-----------------------------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 30
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2246 88 -      4087 -CT----CCCCC----A------TTTCTGTCATCTGAGGGC-TCAGTG-GTTTA----AA-GAG---CTAG-TGAGCT---TGTA----AG---CA--CC---TT----G-AGAC-AGCTAGCC-CT-G-GAACACAG
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412118 88 -   2368649 cct----cttct----a------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382000 88 - 200372422 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5553 88 -     84244 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810590 67 +  53390261 -TC----GC--T----A------CTCCTGTAATTTGAGGGT-TCTATA-GTTTA----AA-GAG---CTCC-TAGGTT---TATA----AA---CA--CC---CT----G-ACAT-----------------------
i Condylura_cristata.JH655891.1                          C 0 I 10
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6150 88 -      8242 -CT----CCTCC----A------CTTCTAAAATTTGAGGGT-TCTACA-ATTTA----AA-GAG---CTCC-CAAGCT---TATA----TG---CA--CC---CT----G-ACAC-AACAAGCC-CT-G-GAATGTAG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12405 79 +     12657 ------------------------TTTTTTAAATTGAGGAT-TCTGCA-ACTTA----AA-AAG---TTCT-CAGACT---TATA----AG---CA--TC---TT----G-ACAT-AGTCAATC-CT-G-GAATACAG
i Crocidura_indochinensis.CroInd_scaffold_77846          I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7754 88 +     87169 -CT----TCTCC----A------CCCCTACATTTTGAGGGT-TCAGTA-GCTTA----AG-GAG---CTTC-CATGCT---TATG----TG---CG--CT---GC----A-ACAC-AGCTATCT-CT-A-AAATGTAG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650027 91 -   1526836 -TC----CCTCT----A------CACATATAAATTGAGGAT-TCTATA-GCTTA----AT-GAG---ATCT-TGAACT---TACA----AACAGC----ACT-TC----A-ATAT-AACCATCT-GC-A-GAATGCAG
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 3 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22669 59 +     50838 -CT----CCTCC----A------TTCCAACCATTTGAGGAT-GTTGTA-GCTTC----AT-GAG---CTCT-TGAACT---TACG----TA---C-------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 29
s Cuniculus_paca.CunPac_flattened_line_7025                  12157 59 +     36344 -CT----CCTCC----A------CTCCTACAATTTGAGGGT-ATTGTA-GCTTT----AT-GAG---CTCT-TGAACT---TATA----TG---C-------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 29
s Dasyprocta_punctata.DasPun_flattened_line_15900            31597 59 +     75252 -CT----CCTTC----A------TGCCTAGAATTTGAGGGT-ATTGTA-ACTTT----AT-GAG---CTCT-TGAACT---TATG----TG---C-------------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 29
s Dasypus_novemcinctus.JH564415.1                          2112701 35 -   2246927 -CT----CCTCC----A------CGC------ATCGAGGGT-TCAGTG-GTTGA----AA-GA---------------------------------------------------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 37
s Delphinapterus_leucas.KZ290073.1                        18635140 88 -  35494412 -ct----ccttc----t------ctcctacaATTTGAGGGT-CCTGTA-GTTTA----AA-GAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGGTAGCC-CT-G-GATTGCAG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11868862 88 -  20541912 -ct----tcccc----actcccactcctacAATGTGAGGGT-CCTGGA-GTCGA----AA-GGA---CTCC-CAAACT---TATG----AG---CG--GC---CC----G-A-------TGGCC-CT-G-GAACGCAG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667674 88 -   1390856 -ct----cctcc----a------ctcctaCAGTTTGAGGGT-TGTGTG-GTTTA----AA-AAG---CTTC-AAAGCT---TATA----AG---CA--CC---CT----G-ACAT-AGCTAGCC-CT-G-GAATGCAG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142476 91 -    198055 -CT----CCTCC----A------CTCCTACAGTTTGAGGGT-TGTGTA-GTTTA----AA-AAG---CTTC-AAAGCTTGTTACA----AG---CA--CC---CT----G-ACAT-ACCTAGCC-CT-G-GAATGCAG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955232 43 -  37912305 -ct----cctcc----a------cacCCACAATTTGAAGGT-TTGGTA-GCTGGTTTCAT------------------------------------------------------------------------------
i Dipodomys_ordii.KN672350.1                             C 0 I 9
s Dipodomys_stephensi.DipSte_scaffold_77284                    844 43 +     14058 -CT----CCTCC----A------CACCCACAATTTGAAGGT-TTGGTA-GCTGGTTTCAT------------------------------------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 I 9
s Dolichotis_patagonum.DolPat_scaffold_80628                 12730 59 +     14636 -CT----CCTCC----A------TTCCTACAATTTGAGAGT-ATTGTA-ACTTT----AT-GAG---CTCT-TGAACT---TATG----TG---C-------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 29
s Echinops_telfairi.JH980293.1                            62858360 87 - 111700974 -tg----cctcc----c------gTTCCATAATCTGAGGCC-TT-GTG-GTTTA----AA-GGG---CTGG-TGAGAT---TGTA----CT---CA--CC---TT----G-ACAC-GGGTAACG-TT-G-GAACACAG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9511 88 +     19438 -CT----CCTCC----A------CTTCTCCAATTTGAGGGT-TCTGTA-GCTTA----AT-GAG---CTCC-CAAACT---TATA----AG---TA--CC---CT----G-ACAC-AACTAGCC-CT-G-GAATGCAG
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       245865 89 -    607251 -tt----ccTTC----A------TGCCTACAATTTGAGGAT-TCTGTACGTCTA----AA-AAT---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAgcc-ct-g-gactgcag
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9113409 87 -  10337057 -ct----tcttt----a------gcaTTAAAATCTGAGGGC-TTTGTG-GCTTG----AA-GAG---CTGG-TGAACT---TGTA----AG---GA--GC---TC----G-ACAC-AAGAAATC-TT-G-GGACATA-
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925405 88 +  41312741 -ct----cctcc----a------ctcctACATTTTGAGGat-tctaca-cctta----aa-gaa---tttC-CAAGCT---CATA----TG---CA--CC---CC----A-ACAC-TGCTATCA-CT-G-GAATGCAG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582631 88 +  14770903 -ct----tctcc----a------ctGCTAAAATTTGAGGGT-TCTGTA-GCTTA----CA-GAA---CTCC-CAAGCT---TATA----AG---CA--CC---CT----G-ACAC-ATCTAGCC-CT-G-GAATGCAG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045140 88 -   4378816 -ct----cctcc----a------ctcctaTCGTTTGAGGGT-TTTGTA-GCTTA----AA-GAG---CTCC-TAAGCT---TGTA----AG---CA--CC---ct----g-acat-agctggcc-ct-g-gaatgcag
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379070 88 +  39960074 -ct----cctcc----a------ctcctaTCGTTTGAGGGT-TTTGTA-GCTTA----AA-GAG---CTCC-TAAGCT---TGTA----AG---CA--CC---ct----g-acat-agctggcc-ct-g-gaatgcag
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415052 88 -    498745 -ct----cctcc----a------ctcctaTCGTTTGAGGGT-TTTGTA-GCTTA----AA-GAG---CTCC-TAAGCT---TGTA----AG---CA--CC---ct----g-acat-agctggcc-ct-g-gaatgcag
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671357 81 +   7059049 -TT----AC--C----C------CT------CTTTTAGGGT-TCTGTA-CATTA----AT-GAA---TTCC-CAAGAT---TATA----AG---CA--CC---CT----G-ACTTAAGCTAGTC-TT-G-GCACACAG
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265851 88 +  21539334 CCT----CCTCT----A------CTTCTACGTTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74353 77 -    133382 --------------------------CTACAATTTGAGGGT-TCTGTA-GTTTA----AA-GAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACCC-AGGTAGCC-CT-G-GATTGCAG
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 3 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2065 88 +     25849 -CT----CCTTC----T------CTCCTACAATTTGAGGGT-TCTGTA-GTTTA----AA-GAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGGTAGCC-CT-G-GATTGCAG
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250369 88 - 206538554 -CT----CCTCC----A------CCCCTACATTTTGAGGGT-TCTGTA-GCTTG----AG-GAG---CTTC-CAAGCT---TATG----TG---CA--CT---GC----A-GCAC-AGctatcc-ct-g-aaatgcag
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120325 88 - 205367284 -CT----CCTCC----A------CCCCTACATTTTGAGGGT-TCTGTA-GCTTG----AG-GAG---CTTC-CAAGCT---TATG----TG---CA--CT---GC----A-GCAC-AGctatcc-ct-g-aaatgcag
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                   967 88 +     25330 -CT----CCTCC----A------CCCCTACATTTTGAGGGT-TCTGTA-GCTTG----AG-GAG---CTTC-CAAGCT---TATG----TG---CA--CT---GC----A-GCAC-AGCTATCC-CT-G-AAATGCAG
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2925965 59 -   3816255 -ct----cctcc----a------ctCTTACAATTTGAGGGT-GTTGTA-GCTTT----AT-GAG---CTCT-CGAACT---CATA----TG---C-------------------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 25
s Galeopterus_variegatus.GalVar_scaffold_51812                4937 88 -     28519 -CT----CCTCC----A------CTCCTACAATTCGAGGGC-TCTGTA-GCTTA----AT-GAG---CTTC-TCTGCT---TCTA----AG---CA--CC---CT----G-ACAC-ATCTAGCC-CT-G-GAATGCAG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2123 89 +    660261 -CT----CCTTC----A------TGCCTACAATTTGAGGAT-CCTGTAAGTCTA----AA-AAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAGCC-CT-G-GACTGCAG
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            4955 86 -      6791 -CT----CTTTA----A------CTCTTACAATTTGAAGGC-TCTGTA-GCTCA----AG-GAG---CTCT-CAAATT---TATA----AG---C----T---CT----G-ACAT-AGCTACCC-CT-G-GAATGTAG
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_935316                                 956 89 +     34797 CCT----CTTCT----A------CTTCTACGTTTTAAGAGC-TCTGTA-GCTTA----GT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGTTG
i Gorilla_beringei.k141_935316                           I 19 I 271
s Gorilla_gorilla.LT578336.1                                 75543 89 +  33314783 cct----cttct----a------CTTCTACGTTTTAAGAGC-TCTGTA-GCTTA----GT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGTTG
i Gorilla_gorilla.LT578336.1                             I 19 I 271
s Graphiurus_murinus.GraMur_scaffold_10447                    6870 86 -     78134 -CC----CCTTC----A------CTCTTACAATTTGAAGGG-TCTGTA-GCTCA----AT-GAG---CTCT-CAAATT---TATA----AG---C----T---CT----G-ACAT-AACTCCCC-CG-G-GAATGTAG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34173 44 -    327341 ---------------------------------------------------------------------TC-CAAGCT---TATG----TG---CG--CT---GC----A-ACAT-CGTTATCC-CT-G-AAATGTAG
i Helogale_parvula.HelPar_flattened_line_2585            I 17 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15790 89 +     48891 -CT----CCTTT----A------TGCCTACAATTTGAGGAT-TCTGTAACTCTA----AA-AAT---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAGCC-CT-G-GACTGCAG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938404 59 -  22651954 -CT----CCTCC----A------CTCCTACAATTTGAGGAT-GTCGTA-GCTTT----AT-GAG---CTCT-TGAACT---TATA----TG---T-------------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 25
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6109 88 +      8654 -GT----CTTCC----A------TGCCCACAAGCTGAGGGC-TCAGCG-TTTTA----TA-GAG---CTGG-TGAGCT---TGTA----GG---CA--TC---TG----T-TCAC-AGCTGGTC-TT-G-GAACACAG
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11177 88 -     36432 -CT----CCTTT----A------CTCCTACAATTTGAGGAT-TCTGTA-GTTTA----AA-GAT---CTCC-CGAGCT---TATT----AA---CA--CC---CT----G-ACAC-AGCTAGCC-TT-G-GGTTCCAG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556222 88 -   1711038 -ct----cctcc----a------ctcCTACAATTTGAGGGT-TCTGTA-GCTTA----AA-TAG---CTCC-CCAGCT---TATA----AG---CA--CC---CT----G-AACA-AACTAGCT-TT-G-GAATGCAG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_363447                591 88 +       852 -CT----CCTCC----A------CTCTTACAATTTGAGGGT-TCTGTA-GCTTA----AA-TAG---CTCC-CAAGCT---TATA----AG---CA--CC---CT----G-AACA-AACTAGCC-TT-G-GAATGCAG
i Hipposideros_galeritus.HipGal_scaffold_363447          C 0 N 0
s Hoolock_leuconedys.ctg274                                    145509 89 -    630532 CCT----CTTCT----A------CTTCTACATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---AA--CC---CT----G-ACAC-AGCTGGTC-TT--GAAATGTTA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73789 88 +     83186 -CT----CCCCC----A------CCCCTACGTTTGGGGGGT-TCGGTA-GCCTA----AG-GAG---CTTG-CAAGCT---TATG----TG---CA--CT---GC----A-ACAC-AGCTATCT-CT-G-AGAAGCAG
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 3 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75345 59 +    143317 -CT----CCTCC----A------TTCCTACAACTTGAGGAT-ATTGTA-ACTTT----AC-GAG---CTCT-TGAACT---TATG----TG---C-------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 29
s Hylobates_agilis.k141_1155965                               8556 89 +     12352 CCT----CTTCT----A------CTTCTACATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---AA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGTTA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15743 89 +     55766 CCT----CTTCT----A------CTTCTACATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---AA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGTTA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055271 89 + 191637585 CCT----CTTCT----A------CTTCTACATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---AA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGTTA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804149 89 +  11177569 CCT----CTTCT----A------CTTCTACATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---AA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGTTA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11219 67 -    135385 -CT----TCCCC----G------CTCCTACAATTTGAAGGTATTTGTA-GCTTT----AT-AAG---CTCT-TGAATT---TACA----TG---C----T-TACT----G-A--------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 1
s Ictidomys_tridecemlineatus.JH393364.1                     390441 87 +   7955117 -ct----tctat----A------CTCCTACAGTTTGAGGGC-TCTGTA-GCTTA----AT-AAG---TCCT-TGAACT---TATA----AG---C-AC-T---CT----G-ATAC-AGCTACC--CT-G-GAATGTAG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13244 88 -     16823 -CT----CCCTC----T------CTCCTACAATTTGAGGGT-TCTGTA-GTTTA----AA-GAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGGTAGCC-CT-G-GATTGCAG
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75082 88 -     97402 -CT----CCTTC----T------CTCGTACAATTTGAGGGT-TCTGTA-GTTTA----AA-GAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGGTAGCC-AT-G-GATAGCAG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45372 82 +    110728 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---C---CC---CT----G-AAAC-AGCTAGTC-TT--GGAATGTTG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1318 88 -     25587 -CT----TCGCC----G------CTGCTAAAATGTGAGGGT-TTTGTA-GCTTA----AA-GAA---CTCC-CAGGCT---TATA----AG---CA--TC---CT----G-ACAC-TTCTAGCT-CT-G-GAATGCAG
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 I 50
s Leontocebus_fuscicollis.k141_3470480                         819 80 -     23187 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---C-----G-ACAC-GG--AGTC-TT--GGGATGTTG
i Leontocebus_fuscicollis.k141_3470480                   I 1 C 0
s Leontocebus_illigeri.k141_2759473                           1133 80 -     14280 CCT----ATGCT----A------------CATTTTAAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---C-----G-ACAC-GG--AGTC-TT--GGGATGTTG
i Leontocebus_illigeri.k141_2759473                      I 2 C 0
s Leontocebus_nigricollis.k141_1320036                         773 80 +      3713 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---C-----G-ACAC-GG--AGTC-TT--GGGATGTTG
i Leontocebus_nigricollis.k141_1320036                   I 1 C 0
s Leontopithecus_chrysomelas.k141_3286424                      958 82 +      8855 CCT----CTGTT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---C-----G-ACAC-AGCTAGTC-TT--GGGAAGTTG
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5759 82 -     13645 CCT----CTGTT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---C-----G-ACAC-AGCTAGTC-TT--GGGAAGTTG
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816675 87 -   3914936 -ct----cctcc----a------ctcctACATTTT-AGCGT-TCTGTA-GCTTA----AA-GAG---TTTC-TAAGCT---TTTA----TG---TA--CC---CT----A-ACAC-TGCTATCA-TT-G-GAATGCAG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     21873 88 +     24238 -CT----CTTCT----A------CTCATACAGTTTGAGGGC-TCTGCA-GGTTA----AT-GAC---CTGT-TGAGTT---TATA----AG---C-AC-C---CT----G-ATAC-AGTCAGCC-CT-G-GAATGCAG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344426 88 +    662738 -ct----ccctc----t------ctcctacaATTTGAGGGT-TCTGTA-GTTTA----AA-GAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGGTAGCC-CT-G-GATTGCAG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336792 77 -   1826925 -------------------------TCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Lophocebus_aterrimus.ctg367                            I 5 C 0
s Loxodonta_africana.GL010049.1                           39087841 89 +  43346337 -ct----tctcc----a------tTCCTACCATCTGAGGGC-TCAACG-GTTTA---AAA-GAG---CTGG-TGAGCT---TGTA----AG---CA--CT---TT----T-ACAC-AGCTggtc-tt-g-gaacacag
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618082 86 +  59628241 -CT----CCTCC----A------TTCTTACATTTTGAGGGT-ACTATA-GCTTA----AA-GAG---CTTC-CAAGCT---TATG----TG---CG--CC---CC----A---AC-TGCTATCA-CT-A-GAATGCAG
i Lycaon_pictus.CM007581.1                               I 1 C 0
s Macaca_arctoides.k141_1757516                              48178 88 -     61512 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375840 88 -  60120075 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28108 88 +     30207 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            2946 88 -      5035 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28061 88 +     30527 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39237 88 -     50087 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  48982 88 +     51645 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418184 88 - 187317192 cct----cttct----a------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402415 88 +  25927173 cct----cttct----a------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51586 88 -     62418 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4117 88 +     14901 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48059 88 +     59329 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  273966 88 +    668171 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2598 88 -      5049 CCT----CTTCT----T------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5765 88 +     17132 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226445 88 -    270270 -CT----CCTCC----A------TTTCTGCAATTTGAGGGT-TCTGTA-GCTTG----AT-GAG---CTCC-CAAACT---TGTA----AG---TA--CC---CT----G-ACAC-AACTAGCC-CT-G-GAATGCAG
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325262 74 +  24302211 ----------------------------ACATTT-AAGAGC-TCTGTG-GCTTA----AC-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GACATGGTG
i Mandrillus_leucophaeus.scaffold280                     I 8 C 0
s Mandrillus_sphinx.Contig270                               360093 74 -    752769 ----------------------------ACATTT-AAGAGC-TCTGTG-GCTTA----AC-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GACATGGTG
i Mandrillus_sphinx.Contig270                            I 8 C 0
s Manis_javanica.JSZB01003497.1                             676726 46 -    737560 ------------------------tgCTACAATTTGAGGGT-CCTGT--GCTTA----AA-TAG---TTCC-CAAGCT---TATA-----------------------------------------------------
i Manis_javanica.JSZB01003497.1                          I 6 I 30
s Manis_pentadactyla.KN006162.1                             224023 45 +    317179 ------------------------TGCTACAATTTGAGGGT-CCTGA--GCTTA----AA-TAG---TTCC-CAAGCT----ATA-----------------------------------------------------
i Manis_pentadactyla.KN006162.1                          I 6 I 30
s Marmota_marmota.CZRN01000018.1                           7504641 87 +  40650429 -ct----tctat----A------TTCCTACAGTTTGAGGGC-TCTGTA-GCTTA----AT-GAG---TCCT-TGAACT---TATA----AG---C-AC-T---CT----G-ATAC-AGCTACC--CT-G-GAATGTAG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       153839 88 +    207569 -CT----CCTCC----A------CTTCTACAATTTGAGGGT-TCTATA-GCTTA----AA-GAG---CTCC-CAAGCT---TATA----AG---CA--CC---CT----G-ACAC-AACTAGCC-CT-G-AAATGCAG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29418 88 -     74585 -CT----CCTCC----A------CTCCTACATTTTGAGGAT-TCTACA-CCTTA----AA-GAG---TTTC-CAAGCT---CATA----TG---CA--CC---CC----A-ACAC-TGCTATCA-CT-G-GAATGCAG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90710 88 +     93471 -CT----CCTTC----T------CTCCTACAATTTGAGGGT-TCTGTA-GTTTA----AA-GAG---CTCC-CAAACT---TATT----AG---CA--CC---CG----G-ACAC-AGGTAGCC-CT-G-GATCGCAG
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12368 82 +     17804 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTGA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---T-----G-ACAC-AGCTAGTG-TT--GGGATGTTG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                 95 82 +      5551 CCT----CTGCT----C------------CATTTTAAGAGC-TCTGTA-GCTGA----AT-GAG---CTCT-CAGGCT---TATG----AA---CA--CC---T-----G-ACAC-AGCTAGTG-TT--GGGATGTTG
i Mico_humeralifer.k141_1189820                          I 1 C 0
s Mico_schneideri.k141_1877700                                     21179 82 -     26561 CCT----CTGCT----C------------CATTTTAAGAGC-TCTGTA-GCTGA----AT-GAG---CTCT-CAGGCT---TATG----AA---CA--CC---T-----G-ACAC-AGCTAGTG-TT--GGGATGTTG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49535 92 +    145209 -TG----CCTCCTCAGA------GTTTTATCCTCAGAGCCC-TTTCTG-GTTTA----AA-GGG---CTGG-TGAGAT---TGTA----TG---CA--CC---TT----G-ACAT-AGCTAACT-TT-G-GAACACAG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188442 88 +    200668 -GT----TCTCC----A------CTCCTACAACGTGAGGGT-CCTGTA-GTTTA----AA-GAA---CTCC-CAAGCT---TATA----AG---CA--TC---CT----G-ACAC-ATCCAGCC-CT-G-GAATGCAG
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368262 88 -   8254450 -tt----tctcc----a------ctgcCAAAATTTGAGGGT-TCTGTA-GCTTA----GA-GAA---CTCC-CAAGCT---TATA----GG---CA--CC---TT----G-ACAC-ATTTAGCC-CT-G-GAATGTAG
i Miniopterus_natalensis.LDJU01000034.1                  I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             45993 88 -     48117 -TT----TCTCC----A------CTGCCAAAATTTGAGGGT-TCTGTA-GCTTA----GA-GAA---CTCC-CAAGCT---TATA----GG---CA--CC---TT----G-ACAC-ATTTAGCC-CT-G-GAATGTAG
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 1 C 0
s Miopithecus_ogouensis.k141_1534655                         25347 88 -     27822 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11908 87 +     27589 -CT----CCTCC----A------CTCCTACATTTT-AGCGT-TCTGTA-GCTTA----AA-GAG---TTTC-TAAGCT---TTTA----TG---TA--CC---CT----A-ACAC-TGCTATCA-CT-G-GAATGCAG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362818 88 +    437263 -CT----CCTTC----T------CTCCTACAATTTGAGGGT-CCTGTA-GTTTA----AA-GAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGGTAGCC-CT-G-GATTGCAG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182857 88 +    366855 -CT----TCTCC----G------CTCCTACAATTTGAAGGC-TCTGTA-GTTTA----AA-GAA---TTCC-CAAGCT---TATA----AG---CA--TC---CT----G-ACAT-ATCTAGCC-CT-G-GAATGCAG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32021 89 -     82753 -CT----CCTTC----A------TGCCTACAATTTGAGGAT-TCTGTAAGCCTA----AA-AAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAGCC-CT-G-GACTTCAG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21922 44 -     63510 ---------------------------------------------------------------------TC-CAAGCT---TATG----TG---CA--CT---GC----A-ACAT-CGTTATCC-CT-G-AAATGTAG
i Mungos_mungo.MunMun_flattened_line_18455               I 17 C 0
s Murina_feae.MurFea_scaffold_17764                          45247 88 +     47283 -CT----TCTCC----A------CTTCTAAAATTTGAGGAT-TCTGCA-GCTTA----AT-GAA---CTCC-CAAGCT---TATA----AG---CA--CC---CT----G-ACAC-ATCTAGCC-CT-G-GAATGCAG
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               2968 86 -    124358 -CT----CCTTC----A------CTCTTACAATTTGAAGGC-TCTGTA-CCTCA----AT-GAG---CTCT-CAAATT---TATA----AG---C----T---CT----G-ACAT-AGCTACCC-CT-G-GAATGTAG
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358293 88 +  14710649 -ct----cctcc----a------ctcctACATTTTGAGGAT-TCTACA-CCTTA----AA-GAG---TTTC-CAAGCT---CATA----TT---TA--CC---CC----A-ACAG-TGCTATCA-CT-G-GAATGCAG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1060 50 -     27262 -CT----GCTCC----A------TTTCTACAATTTGAGGAT-GTTATA-GCAGT----AT-GAG---GTCT-TGAC--------------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 I 32
s Myotis_brandtii.KE162005.1                               9797252 88 +  10118263 -ct----tctct----a------ctgCTAAAATTTGAGGGT-TCTGTA-GCTTA----AG-GAA---CTCC-CAAGCT---TATC----AG---CA--CC---CT----C-ACAC-ATCCAGCC-CT-G-GAATGCAG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391426 88 +   6019432 -ct----tctct----a------ctGCTAAAATTTGAGGGT-TCTGTA-GCTTA----AA-GAA---CTCC-CAAACT---TATC----AG---CA--CC---CT----G-ACAC-ATCCAGCC-CT-G-GAATGCAG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387465 88 +   4330536 -ct----tctct----a------ctGCTAAAATTTGAGGGT-TCTGTA-GCTTA----AA-GAA---CTCC-CAAGCT---TATC----AG---CA--CC---CT----G-ACAC-ATCCAGCC-CT-G-GAATGCAG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6252 88 +     18357 -CT----TCTCT----A------CTGCTTAAATTTGAGGGT-TCTGTA-GCTTA----AA-GAA---CTCC-CAAGCT---TATC----AG---CA--CC---CT----G-ACAT-ATCTAGCC-CT-G-GAATGCAG
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nasalis_larvatus.k141_1350636                              32132 88 +     34575 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAAGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469355 87 -  31847680 -ct----cctcc----a------ctcctACATTTT-AGCGT-TCTGTA-GCTTA----AA-GAG---TTTC-TAAGCT---TTTA----TG---TA--CC---CT----A-ACAC-TGCTATCA-CT-G-GAATGCAG
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235485 79 -   7148211 ------------------------TCCTACAATTTGAGGGT-CCTGTA-GTTTA----AA-GAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGGTAGCC-CT-G-GATTGCAG
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131189 61 -    149072 -------------------------------------------CTGCA-GCTCA----AA-GAA---CCCT-CAAGCT---TATA----AG---CA--TC---CT----G-ACAC-ATCTCGCC-CT-G-GAGTACAG
i Noctilio_leporinus.NocLep_scaffold_7894                I 3 C 0
s Nomascus_annamensis.k141_1771965                           56444 89 -    132029 CCT----CTTCT----A------CTTCTACATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---AA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGTTA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12539 89 -     16345 CCT----CTTCT----A------CTTCTACATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---AA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGTTA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18428 89 +     22201 CCT----CTTCT----A------CTTCTACATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---AA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGTTA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416658 89 -  22158432 CCT----CTTCT----A------CTTCTACATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---AA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGTTA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28833 89 -     54323 CCT----CTTCT----A------CTTCTACATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---AA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGTTA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201786 86 +   9404916 -CT----CCTCC----A------TTCTTACATTTTGAGGGT-ACTATA-GCTTA----AA-GAG---CTTC-CAAGCT---TATG----TG---CG--CC---CC----A---AC-TGCTATCA-CT-G-GAATGCAG
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 C 0
s Octodon_degus.JH651603.1                                11059328 59 -  11899542 -CT----GCTCC----A------TTTCTTCAATTTGAAGGT-GTTGCA-GCTTT----GT-GAG---CTCT-TGAACT---TATG----TG---C-------------------------------------------
i Octodon_degus.JH651603.1                               C 0 I 29
s Odobenus_rosmarus.KB229312.1                             1455124 87 +   2017862 -ct----cctcc----a------ctCCTACACTTT-AGCGT-TCTGTA-GCTTA----AA-GAG---TTTC-TAAGCT---TTTA----TG---TA--CC---CT----A-ACAC-TGCTATCA-CT-G-GAATGCAG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442417 89 -    630418 -TT----CCTTC----A------TGCCTACAATTTGAGGAT-TCTGTAAGTCTA----AA-AAT---CTCC-CAAGCT---TATT----AG---TA--CC---CT----G-ACAC-AGCTAGCC-CT-G-GACTGCAG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22074 89 +    150152 -CT----CCTTC----A------TGCCTACAATTTGAGGAT-TCTGTAAGTCTA----AA-AAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAgcc-ct-g-gactgcag
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8105889 88 +  10937097 -ct----gcttc----t------ctcctacAATTTGAGGGT-CCTGTA-GTTTA----AA-GAG---CTCC-CTTTTT---TTTT----AG---CA--CC---CT----A-ACAC-AGGTAGCC-CT-G-GATTGCAG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               2878 88 +     11607 -CT----TCTCC----A------TTCCTACAATTGGAGGGC-TTAGTG-TTTTA----AA-GAG---CTGG-TAAGCT---TGTA----AG---CA--CC---TT----G-ACAT-AGCTAGCC-TT-G-GAACACAG
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108534 88 - 174332312 -ct----ctact----A------CTCATACAGTTTAAGGGC-TCTGCA-GGTTA----AT-GAC---CTGT-TGAGTT---TATA----AG---C-AC-C---CT----G-ATAC-AGTCAGCC-CT-G-GAATGCAG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42736 86 +    559221 -CT----CCTCC----A------TTCCTACATTTTGAGGGT-ACTATA-GCTTA----AA-GAG---CTTC-CAAGCT---TATG----TG---CG--CC---CC----A---AC-TGCTATCA-CT-G-GAATGCAG
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 C 0
s Ovis_aries.CM001607.2                                   26410816 89 -  44047080 -CT----CCTTC----A------TGCCTACAATTTGAGGAT-TCTGTAACTCTA----AA-AAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAgcc-ct-g-gactgcag
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11439 89 +     17875 -CT----CCTTC----A------TGCCTACAATTTGAGGAT-TCTGTAACTCTA----AA-AAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAGCC-CT-G-GACTTCAG
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  405 89 +      1186 cct----cttct----a------CTTCTACATTTTAAGAGC-TCTGTA-GCTTA----GT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGTTG
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.NBAG03003091.1                             16827 98 -     26668 cct----cttct----a------CTTCTACGTTTTAAGAGC-TCTGTAAGCTTA----GTTGAGGCTCTCCTCAGGCT---TATG----AA---CA--CA---CG----ACATAC-agctagtt-ttttgaaatgtTG
i Pan_troglodytes.NBAG03003091.1                         I 20 I 11
s Panthera_onca.PanOnc_flattened_line_3271                   28375 88 -    230217 -CT----CCTCT----A------CCCCTACATTTTGAGGGT-TCTGTA-GCTTA----AG-GAG---CTTC-CAAGCT---TATG----TG---CA--CT---GC----A-GCAC-AGCTATCC-CT-G-AAATGCAG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465607 88 -  18783137 -CT----CCTCT----A------CCCCTACATTTTGAGGGT-TCTGTA-GCTTA----AG-GAG---CTTC-CAAGCT---TATG----TG---CC--CT---GC----A-GCAC-AGctatcc-ct-g-aaatgcag
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976208 88 +   8748460 -CT----CCTCT----A------CCCCTACATTTTGAGGGT-TCTGTA-GCTTA----AG-GAG---CTTC-CAAGCT---TATG----TG---CA--CT---GC----A-GCAC-AGctatcc-ct-g-aaatgcag
i Panthera_tigris.KE722367.1                             I 5 C 0
s Pantholops_hodgsonii.KE114653.1                          1622334 89 +   2937107 -CT----CCTTC----A------TGCCTATAATTTGAGGAT-TCTGTAACTCTA----AA-AAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAgcc-ct-g-gactgcag
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246263 88 - 183742232 cct----cttct----a------CTTCTACATCT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12548 88 +     21308 CCT----CTTCT----A------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295291 88 -  20919399 CCT----CTTCT----A------CTTCTACATCT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25190 88 -     27687 CCT----CTTCT----A------CTTCTACATCT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1867 88 +     10553 CCT----CTTCT----A------CTTCTACATCT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1828 88 -     10386 CCT----CTTCT----A------CTTCTACATCT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18544 88 +     78924 -CT----CCTTC----A------CCCCTACATTTTTAGGGT-TCTGTA-GCTTA----AG-GAG---CTTC-CAAGCT---TATG----TG---CA--CT---GC----A-ACAC-AGCTATGC-CT-G-AAATGCAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7441 43 +      9367 -CT----TCCCT----A------CACCCACAATTTGAAGGT-TTGGTA-GCTGGTTGCAT------------------------------------------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 9
s Petromus_typicus.PetTyp_scaffold_17301                     35428 32 -     56120 -------------------------------------------TTGTA-GCTTT----AT-GAG---CTCT-TGAACC---TATG----TA---C-------------------------------------------
i Petromus_typicus.PetTyp_scaffold_17301                 I 4 I 28
s Phocoena_phocoena.PhoPho_flattened_line_24159               7410 88 -     63832 -CT----CCTTC----T------CTCCTACAATTTGAGGGT-CCTGTA-GTTTA----AA-GAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGGTAGCC-CT-G-GATTGCAG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5513 88 +     55023 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CC----A-ACAC-AGCTAGTC-TT--GAAATGGTG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5036 88 -     89929 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---GC----A-ACAC-AGCTAGTC-TT--GAAATGGTG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5624 88 +     40849 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---GC----A-ACAC-AGCTAGTC-TT--GAAATGGTG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257353 88 +  14605196 cct----cttct----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---GC----A-ACAC-AGCTAGTC-TT--GAAATGGTG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7743 87 +     22231 -CT----TCTCC----A------CTGCTAAAATTTGAGGCT-TCTGTA-GCTTA----AA-GAA---CTCC-CAAGC----TATA----AG---CA--CC---CT----G-ACAC-ATCTAGCC-CT-G-GCATGCAG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 5 C 0
s Pithecia_albicans.k141_1239476                             66891 83 +    207309 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGCTG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          7986 83 -     25401 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGCTG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33732 83 +     58159 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGCTG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34008 83 +     63561 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGCTG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33763 83 +     51148 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGCTG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558739 83 -   4542175 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGCTG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33747 83 +     51125 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGAATGCTG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4431 88 +     19503 -CT----CCTTC----T------CTCCTACAATTTGAGGGT-TCTGTA-GTTTA----AA-GAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGGTAGCC-CT-G-GATTGCAG
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10171 83 +     39866 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGCC-TC--GGAATGCTG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5253 83 -      9282 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGCC-TT--GGAATGCTG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44657 83 -     87950 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGCC-TC--GGAATGCTG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45051 83 -     88961 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGCC-TC--GGAATGCTG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9749 83 -     39403 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGCC-TC--GGAATGCTG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44701 83 +     87928 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGCC-TC--GGAATGCTG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9748 83 -     60166 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGCC-TC--GGAATGCTG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16669 83 -     67232 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGCC-TC--GGAATGCTG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44601 83 -     90634 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGCC-TC--GGAATGCTG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46068 83 +     89403 CCT----CTTCT----A------------CATTTTGAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGCC-TC--GGAATGCTG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182212 90 - 189387572 cct----cttct----a------CTGCTACGTTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CAA-CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGTTG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      196955 89 -   9816681 CCT----CTTCT----A------CTGCTACGTTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGTTG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30711 88 +     69807 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47894 88 -     80239 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2641 88 -     12774 -GT----CTTCC----A------TGCCCACAAGCTGAGGGC-TCAGCG-TTTTA----TA-GAG---CTGG-TGAGCT---TGTA----GG---CA--CC---TG----T-TCAC-AGCTGGTC-TT-G-GAACACAG
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55517 87 -     66298 --t----tctcc----g------cTCCTGCAATTTGAAGGC-TCTGCG-GTCCA----AA-GAA---CTCT-CAAGTT---TATA----AG---TG--TC---CT----G-ACAC-GTCTAGTC-CT-G-GCATGCAG
i Pteronotus_parnellii.KE847780.1                        I 6 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7902 88 -     18639 -CT----CCTCC----A------CTCCTACATTTTGAGAAT-TCTACA-CCTTA----AA-GAG---TTTC-CAAGCT---CATA----TG---CA--CC---CC----A-ACAC-TGCTATCA-CT-A-GAATGCAG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844061 88 -  28871421 -CT----CCTCC----A------CTTCTACAATTTGAGGGT-TCTGTA-GCTTA----AT-GAG---CTCC-CAAACT---TATA----AG---TA--CC---CT----G-ACAC-AACTAGCC-CT-G-GAATGCAG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540577 88 -   4952924 -CT----CCTCC----A------CTTCTACAATTTGAGGGT-TCTGTA-GCTTA----AT-GAG---CTCC-CAAACT---TATA----AG---TA--CC---CT----G-ACAC-AACTAGCC-CT-G-GAATGCAG
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102593 88 +  38429054 -CT----CCTCC----A------CCCCTACATTTTGAGGGT-TCTGTA-GCTTA----AG-GAG---CTTC-CAAGCT---TATG----TG---CA--CT---GC----A-GCAC-AGctatcc-ct-g-aaatgcag
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             30079 88 +     91421 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156630 88 -   7812017 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAACGGTG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             10930 88 +     72585 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAACGGTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  4935 89 -     55207 -TT----CCTTC----A------TGCCTACAATTTGAGGAT-TCTGTAAGTCTA----AA-AAT---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAGCC-CT-G-GACTGCAG
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2917994 88 +   3329780 -ct----cctcc----a------ctccTACAATTTGAAGGT-TCTGTA-GCTTA----AA-GAG---CTCC-CAAGCT---TATA----AG---CA--CC---CT----G-AACC-AACAAGCC-TT-G-GAATACAG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4537 88 +      7119 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125207 88 + 195417433 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239379 88 -   7961872 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78879 10 -    116970 ------------------------------------------------------------------------------------------------------------------------------T-G-GAATGCAG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 1 C 0
s Saguinus_bicolor.k141_161125                                9304 80 +     12412 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---GATG----AA---CA--CC---C-----G-ACAC-AG--AGTC-TT--GGGATGTTG
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               761 80 +      9876 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---GATG----AA---CA--CC---C-----G-ACAC-AG--AGTC-TT--GGGATGTTG
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16366 78 -     24931 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTG-GCTTC----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---C-----G-ACAC-AG----TC-TT--GGGATGTTG
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1245 78 +      4564 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTG-GCTTC----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---G-----G-ACAC-AG----TC-TT--GGGATGTTG
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4050 78 -      7443 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTG-GCTTC----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---C-----G-ACAC-AG----TC-TT--GGGATGTTG
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       394957 80 - 209938924 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---GATG----AA---CA--CC---T-----G-ACAC-GG--AGTC-TT--GGGATGTTG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1667 78 +     10149 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTG-GCTTC----AT-GAG---CTCC-CGGGCT---TATG----AA---CA--CC---G-----G-ACAC-AG----TC-TT--GGGATGTTG
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1002 80 +     10417 CCT----CTGCT----A------------CATTTTAAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---GATG----AA---CA--CC---C-----G-ACAC-AG--AGTC-TT--GGGATGTTG
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14386 89 +     16473 -CT----TCTTC----A------TGCCTACAATTTGAGGAT-TCTGTAACTCTA----AA-AAG---CTTC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAGCC-CT-G-GACTGCAG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111131 83 + 121099817 ccc----ctGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGGATGTTG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32700 83 -     47369 CCC----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGGATGTTG
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33083 83 -     79414 CCC----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGGATGTTG
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29774 83 -     34454 CCC----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGGATGTTG
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17176 83 -     22428 CCC----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGGATGTTG
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32330 83 -     47109 CCC----CTGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-CCAC-AGCTAGTC-TT--GGGATGTTG
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240353 83 +   5703754 CCT----CCGCT----A------------CATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGGATGTTG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                           9944 83 +     21866 CCT----CCGCT----A------------AATTTTAAGAGC-TCTGTA-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GGGATGTTG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122419 85 +    313613 -CC----TC--T----A------TT-CTGTAATTTGAGGGT-TCTATA-GCTTA----AA-GAG---CTCC-CAGGTT---TATA----AG---TA--CC---CT----G-ACAT-AACTAACC-CT-G-GAATGCAG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1518 88 +     11297 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31911 88 +     58920 CCT----CTTCT----A------CTTCTACATTG-AAGAGT-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18409 88 -     45317 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26067 88 -     42441 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28743 88 -     29113 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31820 88 -     48123 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867168 84 -   1910179 -TT----CC--T----A------TTCCTATAATTTGAGGGT-TCTGTA-GCTTA----GA-GA-----TGC-TAAGCT---TATA----AG---AA--AC---AC----G-ACAT-AGCTAACA-GT-G-GAATGCAG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674412 85 +  18376816 -tt----cc--t----a------ttt-aaaaatttgaGGGT-TCTGCA-GCTTA----AA-AAT---TTCT-TAGGCT---TCTA----AG---CA--CC---TT----G-ACAT-AACTAGCC-CT-G-GAATGCAG
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1872004 87 +   3870691 -ct----tctat----a------CTCCTACAGTTTGAGGGC-TCTGTA-GCTTA----AT-GAG---TCCT-TGAACT---TATA----AG---C-AC-T---CT----G-ATAC-AGCTACC--CT-G-GAATGTAG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16127 88 -     97271 -CT----CCTCC----A------TTCCTACATTTTGAGGAT-TCTGCA-CCTTA----AA-GAG---TTTC-CAAGCT---TATA----TG---AA--CC---CC----A-ACAC-TGCTATCA-CT-T-GAGTGCAG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128798 44 +    196729 ---------------------------------------------------------------------TC-CAAGCT---TATG----TG---CA--CT---GC----A-ACAT-CGTTATCC-CT-G-AAATGTAG
i Suricata_suricatta.SurSur_flattened_line_6629          I 44 C 0
s Sus_scrofa.CM000828.4                                    6648028 88 +  69701581 -ct----tctcc----a------ctcCTGCAATTCAAGGGT-TCTGTA-GGTTA----AA-GAG---CTTC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAT-AGCTAGTC-CT-G-GAATGCAG
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       393915 89 +   1523678 CCT----CTTCT----A------CTTCTACATTTTAAGAGC-TCTGTA-GCTTA----AT-GGG---CTCC-CAGGCT---TATG----AA---AA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGTTA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17464 84 +     22964 -CT----TCTCC----A------TTTCTAAAATTTG----T-TCTGTA-GCTTA----GA-GAA---CTCC-CAAGTT---TATA----AG---CA--CC---TT----G-ACAC-ATCTAGCC-CT-G-GAAGGCAG
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194861 88 +    199430 -CT----CCTCT----A------CTCCTACAGTTTGAGGGT-TGTGTA-GCTTA----AA-GAG---CTCC-CAAGCT---TATA----AG---CA--CC---TT----G-GCAT-AGCTAGTC-CT-G-GAATGCAG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108841 88 -    539355 -CT----CCTCT----A------CTCCTACAGTTTGAGGGT-TGTGTA-GCTTA----AA-GAG---CTCC-CAAGCT---CATA----AG---CA--CC---TT----G-GCAT-AGCTAGTC-CT-G-GAATGCAG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4468 89 +      9917 CCT----TATTC----G------CTTCCACAATTTGAAGAC-TCTGTG-GCTTA----AT-GAG---CTCC-TAGGCT---CATG----AA---CA--TC---CT----G-ACAC-AACTAGTT-CT--GGAATGCAG
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11264 89 +     20590 CCT----TATTC----G------CTTCTACAATTTGAAGAC-TCTGTG-ACTTA----AT-GAG---CTCC-TAGGCT---CATG----AA---CA--TC---CT----G-ACAC-AACTAGTT-CT--GGAATGCAG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356074 88 - 186847797 cct----cttct----a------CTTCTACATTT-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TATG----AA---CA--CC---CC----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27703 58 -     33621 -TT----CCTCC----G------TTCCTACTATTTGTG-GT-GTTGTA-GCTTT----AT-GAG---CTCT-TGAACT---TATG----TG---C-------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 28
s Tolypeutes_matacus.TolMat_scaffold_31955                   22436 58 -     31044 -CT----CCTCT----G------CTGCGACCATTTGAGGGC-TCAGGG-GTTGA----AA-GAG---CTAG-AGAGCT---TGTG----AG-----------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 28
s Tonatia_saurophila.TonSau_scaffold_294                    483771 88 -    610378 -CT----TCCCC----A------CTCCTACAATCCAAGGGT-CCTGTA-GTTTA----AA-GAA---CTCC-CAAGCT---TATA----AG---CA--TC---CT----G-ACAC-ATCCAGCC-CT-G-GAATGCAG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23820 88 +     26378 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTT-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36618 88 -     78344 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23145 88 +     25722 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTT-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31574 88 -     62838 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GTTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31565 88 +     46913 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12303 88 -     28527 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTT-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33505 88 -     64340 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31543 88 -     63452 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    12994 88 +     22490 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GTTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                          960 88 +      9911 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          755 88 -     33539 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTTC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258514 88 -   6242583 CCT----CTTCT----A------CTTCCACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4533 88 +     19340 CCT----CTTCT----A------CTTCTACATTG-AAGAGC-TCTGTG-GCTTA----AT-GAG---CTCC-CAGGCT---TGTG----AA---CA--CC---CT----G-ACAC-AGCTAGTC-TT--GAAATGGTG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177645 89 -    200418 -TT----CCTTC----A------CTCCTACAATTTGAGCAT-TTTTTAAGTCTA----AA-AAG---CTCC-CAAGAT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAGCC-CT-G-GATTGCAG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485449 86 -  10818551 -ct----cctcc----a------ttCCTACAAT-GGAGGGC-TCGGTG-GTTTA-----A-GAG---CTGG-TAAGCT---TGTA----AG---CA--CC---TT----T-ACAC-AGCTggtc-tt-g-gaacacag
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839408 87 -   4065304 -ct----tcttt----g------ctccTGTAGTTCAAAGGC-TGAGTA-GCTTA----AT-GAA---CCTT-TGAAAT---GATA----AG---CG--CT---CA----G-ACAT-AGCTAATC-CT-A-C-ATATAG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13501 87 -     70247 -CT----TCTTT----G------CTCCTACAGTTCAAAGGC-TGAGTA-GCTTA----AT-GAG---CCTT-TGAAAT---GATA----AG---CG--CT---CA----G-ACAT-AGCTAACC-CT-A-C-ATGCAG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369013 88 -  33153633 -ct----gcttc----t------ctcctacGATTTGAGGGT-CCTGTA-GTTTA----AA-GAG---CTCC-CAAGCT---TATT----AG---CA--CC---CT----G-ACAC-AGGTAGCC-CT-G-GATTGCAG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7206 85 -     21056 -CC----TC--T----A------CTCCTGTACTTTGAATGT-TCTATG-GCTAA----AA-GAA---CTCC-TAGGTT---TATA----AG---CA--CC---CT----G-ACA--AACTAACC-TT-G-GAATGCAA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185327 88 +   5085361 -CT----CCTCC----A------CTCCTACATTTTGAGGGT-TCTGTA-GCTTC----AA-GAG---TTTC-CAAGCT---TATA----TG---TA--CC---CC----A-ACAC-TGCTACCA-CT-G-GAATGCAG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   80195 38 +   5488506 ----------------------------------------------------------------------------CT---TATT----AG---CA--CC---CT----G-ACAC-AGCTAGCC-CT-G-CAATGCAG
i Vicugna_pacos.KN270157.1                               I 42 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108680 86 -    112863 -CT----CCTCC----A------TTCTTACATTTTGAGGGT-ACTATA-GCTTA----AA-GAG---CTTC-CAAGCT---TATG----TG---CG--CC---CC----A---AC-TGCTATCA-CT-G-GAATGCAG
i Vulpes_lagopus.VulLag_flattened_line_12041             I 1 C 0
s Xerus_inauris.XerIna_scaffold_2302                        177875 89 -    224448 -CT----TCTCT----A------CTCCTACAGTTTGAGGGC-TCTATA-GCTTA----AG-GAG---TCTT-TGAACT---TCCAGTGTAG---C----T---TT----G-ATAC-AGCTACA--CT-G-GAATGTAG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32330 87 -     86975 -CT----CCTCC----A------CTCCTACATTTT-AGCAT-TCTGTA-GCTTA----AA-GAG---TTTC-TAAACT---TTTA----TG---TA--CC---CT----A-ACAC-TGCTATTA-CT-G-GAATGCAG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639             974 89 +      3447 -CT----CCTTC----T------CTCCTACAATTTGAGGGTTTCTGTA-GTTTA----AA-GAG---CTCC-CAAGCT---TATT----AG---CA--CC---TG----G-ACAC-AGGTAGCC-CT-G-GATCGCAG
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Nannospalax_galili.KL204047.1                             950156 17 +   3037898 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Zapus_hudsonius.ZapHud_scaffold_11398                       4514  0 -     63895 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    52716 15 +     77746 I
e Rattus_norvegicus.chr16                                 37025869 17 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            40662 17 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         250931 17 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    7712 17 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    97170 17 -    140218 I
e Mus_spretus.CM004101.1                                  39500209 17 + 130317789 I
e Mus_pahari.LT608297.1                                   58219252 17 +  89631738 I
e Mus_musculus.chr8                                       41691290 17 + 129401213 I
e Mus_caroli.LT608237.1                                   35597750 17 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15966555 17 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53128 17 -    140813 I
e Jaculus_jaculus.JH725527.1                               1242770 296 +   9596543 I
e Ellobius_talpinus.LOJH01026522.1                           17069 17 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          35140 17 +    110024 I
e Cricetulus_griseus.LT883664.1                          213118941 17 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 47428 16 -     83289 I
e Allactaga_bullata.AllBul_scaffold_20030                    21217 300 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28733 17 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9965 11 +     36723 C----CAGCATTG------------TA
s Acinonyx_jubatus.LLWD01001279.1                           816455 11 +   1699592 c----cagcaCTT------------GA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418961 11 +  29979442 C----CAGCACTT------------TA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            218959 11 +    347723 C----CAGCACTT------------TA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50909 10 +     53615 C----CAG-AGCG------------TA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2936 11 +     13857 C----CAGCAGCG------------TA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19492 11 -     21945 C----CAGCAGCA------------TA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21177 11 +     32033 C----CAGCAGCG------------TA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74432 11 -     84148 C----CAACGCCA------------TA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46676 11 -     78289 C----GAACGCCA------------TA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46102 11 +     55831 C----CAACGCCA------------TA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44564 11 -     64179 C----CAACGCCA------------TA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1671 11 -      3959 C----CAACGCCA------------TA
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43189 11 +     45454 C----CAATGCCA------------TA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48838 11 +     70886 C----CAACGCCA------------TA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11008 11 +     30854 C----CAACGCCA------------TA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35144 11 +     42133 C----CAACGCCA------------TA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592164 11 +   2318259 C----CAGcactt------------ta
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180570 11 -    412891 C----CAGCCCTT------------TA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53320 11 -     68529 C----CAGCACTT------------TA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3349 11 +     17741 C----CAACACTG------------TA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3974 11 -     15923 C----CAACACTG------------TA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674256 11 +   5030052 C----CAACACTG------------TA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4250 11 -     16391 C----CAACACTG------------TA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3809 11 -     17186 C----CAACACTG------------TA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27422 11 -     32367 C----CAGTACTG------------TA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9084 11 -     15198 C----CAGCCCTT------------TA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276907 11 +  21539123 C----CAACACTG------------TA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13072 11 +     48076 C----CAACACTG------------TA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8208 11 -     28759 C----CAACACTG------------TA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35764 11 +     44353 C----CAACACTG------------TA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51134 11 -     71267 C----CAACACTG------------TA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25192 11 -     33135 C----CAACACTG------------TA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966816 11 -  23207421 C----CAGCTCTT------------TA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3317 11 -     25979 C----CAGCTCTT------------TA
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93153 11 +    124022 C----CAGCACTT------------TA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36352 11 +    288883 c----cagcACTT------------TA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423493 11 -  48749331 c----cagcACTT------------TA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      769094 11 +   1948126 c----cagcactt------------ta
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559639 11 -  45695690 c----cagcACTT------------TA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536320 11 -   4408762 c----caggaCTT------------TA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                   9996  4 +     28062 C----C-------------------TA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45287  4 -     91139 C----C-------------------TA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22814  4 +     95584 C----C-------------------TA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22727  4 +    119600 C----C-------------------TA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12341 11 +     18648 C----CAACACTG------------TA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11848 11 -     13885 C----CAGCACTG------------TA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            3947 11 -      8861 C----CAACACTG------------AA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456343 11 + 189096842 C----CAACACTG------------TA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               3863 11 +      8664 C----CAACACTG------------AA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7634859 11 +  17673402 C----CAGCACTT------------TA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4669160 11 +   7040546 C----CAGCACTT------------TA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1212858 11 +   1652518 C----CAGCACTT------------TA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42508900 11 +  60362399 A----CAGCACTT------------TA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12535 11 -     23171 A----CAGCACTT------------TA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225876 11 +   9314153 A----CAGCACTT------------TA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41619013 11 +  59632846 A----CAGCACTT------------TA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110594 11 -  63665305 A----CAGCACTT------------TA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416168 11 -  46296322 c----cagcactt------------ta
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598165 11 +  44709034 c----cagcactt------------ta
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2084 11 -     20114 C----CAGTACTG------------TA
i Capromys_pilorides.CapPil_scaffold_26391               I 28 I 10
s Carlito_syrichta.NW_007259797.1                           274366 11 +    496798 C----CAGCACTA------------TA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               3958 11 +      9923 C----CAGCCCTT------------TA
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83168 11 -    217609 C----CAGCACTT------------TA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              5000054 11 +  23392119 T----CAGCACTG------------CA
i Cavia_aperea.AVPZ01000300.1                            I 29 I 10
s Cavia_porcellus.DS562891.1                               5003495 11 +  23407841 T----CAGCACTG------------CA
i Cavia_porcellus.DS562891.1                             I 29 I 10
s Cavia_tschudii.CavTsc_scaffold_8919                          380 11 -    143979 T----CAGCACTG------------CA
i Cavia_tschudii.CavTsc_scaffold_8919                    I 29 I 10
s Cebuella_niveiventris.k141_592277                           7258 11 -     12580 C----CAACACTG------------TA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45313 11 +     53515 C----CAACACTG------------TA
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376046 11 -  26074798 C----CAGTGCTG------------TA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10116 11 -     34880 C----CAGTGCTG------------TA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69213 11 -     89041 C----CAGTGCTG------------TA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2029 11 -     76265 C----CAGCACTG------------TA
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495491 11 -  27778364 C----CAGCACTC------------CA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22324 11 +     27315 C----CAGCACTC------------CA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                143992 11 -   4669795 C----CAGCAGCA------------TA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47725 11 +     47900 C----CAGCAGCC------------TA
i Cercocebus_chrysogaster.k141_1522556                   C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3164 11 -     14410 C----CAGCAGCA------------TA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47546 11 -    148725 C----CAGCAGCA------------TA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29823 11 -     40656 C----CAGCCGCG------------TA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9782 11 +     20796 C----CAGCCGCG------------TA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14896 11 -     17524 C----CAGCTGCG------------TA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30629 11 -     34525 C----CAGCCGCG------------TA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14407 11 -     25376 C----CAGCCGCG------------TA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  366996 11 -  39242232 C----CAGCCGCA------------TA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272721 11 +  21565898 C----CAGCCGCG------------TA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35088 11 -     45857 C----CAGCCGCG------------TA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       29989 11 -     32606 C----CAGCAGCA------------TA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6148 11 +      8499 C----CAGCCGCG------------TA
i Cercopithecus_petaurista.k141_42573                    C 0 I 7
s Cercopithecus_pogonias.k141_6079                           28549 11 +     70610 C----CAGCCGCG------------TA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25511 11 +     36323 C----CAGCCGCG------------TA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15414 11 -     19938 C----CAACACTT------------TA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 15 C 0
s Cheracebus_lucifer.k141_2312002                            11082 11 -     32913 C----CAACACTG------------TG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21495 11 -     40346 C----CAACACTG------------TG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21749 11 +    216457 C----CAACACTG------------TG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21539 11 +     39636 C----CAACACTG------------TG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33629  4 -     52013 c----c-------------------cg
i Chiropotes_albinasus.k141_1091259                      I 142 C 0
s Chiropotes_israelita.k141_313004                           44628  4 -    112038 C----C-------------------TA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10178  4 +     34062 C----C-------------------TA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346411 11 +  18827391 C----CAGCAGCG------------TA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12950 11 -     44032 C----CAGCAGCG------------TA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307797 11 - 135778131 C----CAGCAGCG------------TA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2110 11 +     10270 C----CAACATTT------------TA
i Choloepus_didactylus.ChoDid_scaffold_147047            I 30 C 0
s Choloepus_hoffmanni.KN194906.1                            609587 11 -    839153 C----CAACATTT------------TA
i Choloepus_hoffmanni.KN194906.1                         I 30 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2334 11 -      4087 C----CAGCACTT------------GA
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412206 11 -   2368649 C----CAGCGGCG------------TA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382088 11 - 200372422 C----CAGCGGCG------------TA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5641 11 -     84244 T----CAGCGGCG------------TA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810667 11 +  53390261 T----CAGCACTT------------TA
i Condylura_cristata.JH655891.1                          I 10 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6238 11 -      8242 C----CAGTATGT------------CA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12484 11 +     12657 C----CATCACTA------------AT
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7842 11 +     87169 C----CAGCACTT------------GA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650118 11 -   1526836 C----TAGCACTG------------TA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22757 11 +     50838 C----CAGCACTG------------TA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 29 I 10
s Cuniculus_paca.CunPac_flattened_line_7025                  12245 11 +     36344 T----CAGCACTG------------CA
i Cuniculus_paca.CunPac_flattened_line_7025              I 29 I 10
s Dasyprocta_punctata.DasPun_flattened_line_15900            31685 11 +     75252 C----CAGCACTG------------CA
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 29 I 10
s Dasypus_novemcinctus.JH564415.1                          2112773 11 -   2246927 C----CTGCGCTG------------TA
i Dasypus_novemcinctus.JH564415.1                        I 37 C 0
s Delphinapterus_leucas.KZ290073.1                        18635228 11 -  35494412 C----CAGCTCTT------------TA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11868950 11 -  20541912 C----CAGCCCTT------------CC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667762 11 -   1390856 C----CAGCACTT------------TA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142567 11 -    198055 C----CAGCACTT------------TA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955284 11 -  37912305 C----CAGCATTA------------TA
i Dipodomys_ordii.KN672350.1                             I 9 I 15
s Dipodomys_stephensi.DipSte_scaffold_77284                    896 11 +     14058 C----CAGCATTA------------TA
i Dipodomys_stephensi.DipSte_scaffold_77284              I 9 I 15
s Dolichotis_patagonum.DolPat_scaffold_80628                 12818 11 +     14636 T----CAGCACTG------------CA
i Dolichotis_patagonum.DolPat_scaffold_80628             I 29 I 10
s Echinops_telfairi.JH980293.1                            62858447 10 - 111700974 C----CAACACT-------------TA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9599 15 +     19438 CCAGCCAGCACTT------------TA
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       245954 11 -    607251 c----cagcACTT------------TA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9113496  8 -  10337057 -------GTActt------------ca
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925493 11 +  41312741 C----CAGCACTT------------TA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582719 11 +  14770903 C----CAGCACTT------------TA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045228 11 -   4378816 c----cagcactt------------ta
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379158 11 +  39960074 c----cagcactt------------ta
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415140 11 -    498745 c----cagcactt------------ta
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671438 11 +   7059049 C----CAGTACTT------------AA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265939 11 +  21539334 C----CAGCAGCG------------TA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74430 11 -    133382 C----CAGCTCTT------------TA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2153 11 +     25849 C----CAGCTCTT------------TA
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250457 11 - 206538554 c----cagcaCTT------------GA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120413 11 - 205367284 c----cagcaCTT------------GA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  1055 11 +     25330 C----CAGCACTT------------GA
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2926049 11 -   3816255 C----CAGCACTG------------TA
i Fukomys_damarensis.KN121974.1                          I 25 I 10
s Galeopterus_variegatus.GalVar_scaffold_51812                5025 11 -     28519 C----CAGCACTG------------TA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2212 11 +    660261 C----CAGCACTT------------TA
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            5041 11 -      6791 C----CAGCAAGG------------TA
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                715 11 -      2763 C----CAGCATTG------------TA
i Gorilla_beringei.k141_3218903                          I 89 C 0
s Gorilla_gorilla.LT578341.1                                259135 11 - 186649187 C----CAGCATTG------------TA
i Gorilla_gorilla.LT578341.1                             I 89 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    6956 11 -     78134 G----CAGCAAGG------------TA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34217 11 -    327341 C----CAGCACTT------------GA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15879 11 +     48891 C----CAGCACTT------------TA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938488 11 -  22651954 C----CAGCACTG------------TA
i Heterocephalus_glaber.JH602082.1                       I 25 I 10
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6197 11 +      8654 C----CAGCACTT------------TA
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11265 11 -     36432 C----CAGCACGT------------TA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556310 11 -   1711038 C----CAGTACTT------------TA
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                 26 11 -      8370 C----CAGTACTT------------TA
i Hipposideros_galeritus.HipGal_scaffold_108494          N 0 C 0
s Hoolock_leuconedys.ctg274                                    145598 11 -    630532 C----CAACACTG------------TA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73877 11 +     83186 C----CAGCGCTT------------GA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75433 11 +    143317 T----CAGCACTG------------CA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 29 C 0
s Hylobates_agilis.k141_1155965                               8645 11 +     12352 C----CAACACTG------------TA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15832 11 +     55766 C----CAACACTG------------TA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055360 11 + 191637585 C----CAACACTG------------TA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804238 11 +  11177569 C----CAACACTG------------TA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11287 11 -    135385 C----CAGTATTG------------TA
i Hystrix_cristata.HysCri_scaffold_5660                  I 1 I 10
s Ictidomys_tridecemlineatus.JH393364.1                     390528 11 +   7955117 C----CAGCACTG------------TA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13332 11 -     16823 C----CAGCTCTT------------TA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75170 11 -     97402 C----CAGCTCTT------------TA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45454 11 +    110728 C----CAACACCG------------TA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    36129 11 -     49555 C----CAGCACTG------------TA
i Lasiurus_borealis.LasBor_scaffold_26245                I 108 C 0
s Leontocebus_fuscicollis.k141_3470480                         899 11 -     23187 C----CAACACTG------------TG
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1213 11 -     14280 C----CAACACTG------------TG
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         853 11 +      3713 C----CAACACTG------------TG
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1040 11 +      8855 C----CAACACTG------------TA
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5841 11 -     13645 C----CAACACTG------------TA
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816762 11 -   3914936 C----CAGCACTT------------CA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     21961 11 +     24238 A----TAGCATGG------------TA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344514 11 +    662738 C----CAGCTCTT------------TA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336869 11 -   1826925 C----CAGCAGCA------------TA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39087930 11 +  43346337 c----cagcacTT------------CA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618168 11 +  59628241 A----CAGCACTT------------TA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48266 11 -     61512 C----CAGCAGCG------------TA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375928 11 -  60120075 C----CAGCAGCG------------TA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28196 11 +     30207 C----CAGCAGCG------------TA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3034 11 -      5035 C----CAGCAGCG------------TA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28149 11 +     30527 C----CAGCAGCG------------TA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39325 11 -     50087 C----CAGCAGCG------------TA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49070 11 +     51645 C----CAGCAGCG------------TA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418272 11 - 187317192 C----CAGCAGCG------------TA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402503 11 +  25927173 C----CAGCAGCA------------TA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51674 11 -     62418 C----CAGCAGCG------------TA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4205 11 +     14901 C----CAGCAGCG------------TA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48147 11 +     59329 C----CAGCAGCG------------TA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274054 11 +    668171 C----CAGCAGCG------------TA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2686 11 -      5049 C----CAGCAGCG------------TA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5853 11 +     17132 C----CAGCAGCG------------TA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226533 11 -    270270 C----CAGCACTT------------TA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325336 11 +  24302211 C----CAGCAGCC------------TA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360167 11 -    752769 C----CAGCAGCC------------TA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676802 11 -    737560 C----CAGCATTT------------TA
i Manis_javanica.JSZB01003497.1                          I 30 C 0
s Manis_pentadactyla.KN006162.1                             224098 11 +    317179 C----CAGCATTT------------TA
i Manis_pentadactyla.KN006162.1                          I 30 C 0
s Marmota_marmota.CZRN01000018.1                           7504728 11 +  40650429 C----CAGCACTG------------TA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       153927 11 +    207569 C----CAGTACTT------------TA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29506 11 -     74585 G----CAGCACTT------------TA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90798 11 +     93471 C----CAGCTCTT------------TA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12450 11 +     17804 C----CAACACTG------------TA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                177 11 +      5551 C----CAACACTG------------TA
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21261 11 -     26561 C----CAACACTG------------TA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49627 11 +    145209 C----CAGCACTT------------TA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188530 11 +    200668 C----CAGCCCTT------------TA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368350 11 -   8254450 C----CAGCACTT------------TA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46081 11 -     48117 C----CAGCACTT------------TA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25435 11 -     27822 C----CAGCAGCG------------TA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        11995 11 +     27589 C----CAGCACTT------------CA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362906 11 +    437263 C----CAGCTCTT------------TA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182945 11 +    366855 C----CAGCACTT------------CA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32110 11 -     82753 C----CAGCACTT------------TA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21966 11 -     63510 C----CAGCACTT------------GA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45335 11 +     47283 C----CAGCATTT------------TA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3054 10 -    124358 C----CAGAA-AG------------TA
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358381 11 +  14710649 C----CAGAACTT------------TA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1142 11 -     27262 C----CAGCACTG------------TA
i Myocastor_coypus.MyoCoy_scaffold_57531                 I 32 I 10
s Myotis_brandtii.KE162005.1                               9797340 11 +  10118263 C----CAGCACTT------------TA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391514 11 +   6019432 C----CAGCACTT------------TA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387553 11 +   4330536 C----CAGCACTT------------TA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6340 11 +     18357 C----CAGCACTT------------TA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nasalis_larvatus.k141_1350636                              32220 11 +     34575 C----CAGCAGCG------------TA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469442 11 -  31847680 C----CAGCACTT------------CA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235564 11 -   7148211 C----CAGCTCTT------------TA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131250 11 -    149072 C----CAGCACTT------------TG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56533 11 -    132029 C----CAACACTG------------TA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12628 11 -     16345 C----CAACACTG------------TA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18517 11 +     22201 C----CAACACTG------------TA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416747 11 -  22158432 C----CAACACTG------------TA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28922 11 -     54323 C----CAACACTG------------TA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201872 11 +   9404916 A----CAGCACTT------------TA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059416 11 -  11899542 A----CAGCAGTG------------TA
i Octodon_degus.JH651603.1                               I 29 I 10
s Odobenus_rosmarus.KB229312.1                             1455211 11 +   2017862 T----CAGTACTT------------CA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442506 11 -    630418 C----CAGCACTT------------TA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22163 11 +    150152 c----cagcACTT------------TA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8105977 11 +  10937097 C----CAGCTCTt------------ta
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               2966 11 +     11607 C----CAGCACTT------------TA
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108622 11 - 174332312 A----CAGCATGG------------TA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42822 11 +    559221 A----CAACACTT------------TA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26410905 11 -  44047080 c----cagcactt------------ta
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11528 11 +     17875 C----CAGCACTT------------TA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  494 11 +      1186 C----CAGCATTG------------TA
i Pan_paniscus.AJFE02001037.1                            C 0 I 40
s Pan_troglodytes.CM009242.2                               1477114 11 - 189151597 C----CAGCATTG------------TA
i Pan_troglodytes.CM009242.2                             I 92 I 81
s Panthera_onca.PanOnc_flattened_line_3271                   28463 11 -    230217 C----CAGCACTT------------GA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465695 11 -  18783137 c----cagcaCTT------------GA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976296 11 +   8748460 c----cagcaCTT------------GA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622423 11 +   2937107 c----cagcactt------------ta
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246351 11 - 183742232 C----CAGCAGCA------------TA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12636 11 +     21308 C----CAGCAGCA------------TA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295379 11 -  20919399 C----CAGCAGCA------------TA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25278 11 -     27687 C----CAGCAGCA------------TA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1955 11 +     10553 C----CAGCAGCA------------TA
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1916 11 -     10386 C----CAGCAGCA------------TA
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18632 11 +     78924 C----CAGCACTT------------GA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7493 11 +      9367 C----CAGAATGG------------TA
i Perognathus_longimembris.PerPac_flattened_line_89005   I 9 I 15
s Petromus_typicus.PetTyp_scaffold_17301                     35488 11 -     56120 C----TGGCACTG------------CA
i Petromus_typicus.PetTyp_scaffold_17301                 I 28 I 10
s Phocoena_phocoena.PhoPho_flattened_line_24159               7498 11 -     63832 C----CAGCTCTT------------TA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5601 11 +     55023 C----CAGCAGCG------------TA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5124 11 -     89929 C----CAGCAGCG------------TA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5712 11 +     40849 C----CAGCAGCG------------TA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257441 11 +  14605196 C----CAGCAGCG------------TA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7830 11 +     22231 C----CAGCACTT------------CA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66974  4 +    207309 C----C-------------------TA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8069  4 -     25401 C----C-------------------TA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33815  4 +     58159 C----C-------------------TA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34091  4 +     63561 C----C-------------------TA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33846  4 +     51148 C----C-------------------TA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558822  4 -   4542175 C----C-------------------TA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33830  4 +     51125 C----C-------------------TA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4519 11 +     19503 C----CAGCTCTT------------TA
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10254 11 +     39866 C----CAACACTG------------TG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5336 11 -      9282 C----CAACACTG------------TA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44740 11 -     87950 C----CAACACTG------------TG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45134 11 -     88961 C----CAACACTG------------TG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9832 11 -     39403 C----CAACACTG------------TG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44784 11 +     87928 C----CAACACTG------------TG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9831 11 -     60166 C----CAACACTG------------TG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16752 11 -     67232 C----CAACACTG------------TG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44684 11 -     90634 C----CAACACTG------------TG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46151 11 +     89403 C----CAACACTG------------TG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182302 11 - 189387572 C----CAGCACTG------------TA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197044 11 -   9816681 C----CAGCACTG------------TA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30799 11 +     69807 C----CAGCAGCG------------TA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47982 11 -     80239 C----CAGCAGCG------------TA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2729 11 -     12774 C----CAGCACTT------------TA
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55604 11 -     66298 C----CAGCACTT------------TA
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          7990 11 -     18639 C----CAGCACTT------------TA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844149 11 -  28871421 C----CAGCACTT------------TA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540665 11 -   4952924 C----CAGCACTT------------TA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102681 11 +  38429054 c----cagcaCTT------------GA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             30167 11 +     91421 C----CAGCAGCG------------TA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156718 11 -   7812017 C----CAGCAGCG------------TA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11018 11 +     72585 C----CAGCAGCG------------TA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5024 11 -     55207 C----CAGCACTT------------TA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918082 11 +   3329780 C----CAGTACTT------------TA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4625 11 +      7119 C----CAGCAGCG------------TA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125295 11 + 195417433 C----CAGCAGCG------------TA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239467 11 -   7961872 C----CAGCAGCG------------TA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78889 11 -    116970 C----CAGCACTT------------TA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9384 11 +     12412 C----CAACActg------------tg
i Saguinus_bicolor.k141_161125                           C 0 I 135
s Saguinus_geoffroyi.k141_356064                               841 11 +      9876 C----CAACACTG------------TG
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16444 11 -     24931 C----CAACACTG------------TG
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1323 11 +      4564 C----CAACGCTG------------TG
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4128 11 -      7443 C----CAACACTG------------TG
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395037 11 - 209938924 C----Caacactg------------tg
i Saguinus_midas.LG03                                    C 0 I 135
s Saguinus_mystax.k141_6319370                                1745 11 +     10149 C----CAACGCTG------------TG
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1082 11 +     10417 C----CAACACTG------------TG
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14475 11 +     16473 C----CAGCTCTT------------TA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111214 11 + 121099817 T----CGGCACTG------------TA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32783 11 -     47369 T----CGGCACTG------------TA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33166 11 -     79414 T----CGGCACTG------------TA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29857 11 -     34454 T----CGGCACTG------------TA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17259 11 -     22428 T----CGGCACTG------------TA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32413 11 -     47109 T----CGGCACTG------------TA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240436 11 +   5703754 C----CAGTACTG------------TA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10027 11 +     21866 C----CAGTACTG------------TA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122504 11 +    313613 C----CCACACTT------------TA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1606 11 +     11297 C----CAGCAGCG------------TA
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      31999 11 +     58920 C----CAGCAGCG------------TA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18497 11 -     45317 C----CAGCAGCG------------TA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26155 11 -     42441 C----CAGCAGCG------------TA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28831 11 -     29113 C----CAGCAGCG------------TA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31908 23 -     48123 C----CAGCAGCACCCTGACACAGCTA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867252 11 -   1910179 C----CTGCACTT------------TA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674497 11 +  18376816 C----CAGTACTA------------AT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1872091 11 +   3870691 C----CAGCACTG------------TA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16215 11 -     97271 C----CAGCACTT------------TA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128842 11 +    196729 C----CAGCACTT------------GA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6648116 11 +  69701581 C----CAGCACTT------------TA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       394004 11 +   1523678 C----CAACACTG------------TA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17548 11 +     22964 C----CAGCACTT------------TA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194949 11 +    199430 C----CAGCACTT------------TA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108929 11 -    539355 C----CAGCACTT------------TA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4557 11 +      9917 C----CAGCACTG------------TA
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11353 11 +     20590 C----CAGCACTG------------TA
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356162 11 - 186847797 C----CAGCAGCA------------TA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27789 11 -     33621 C----TGGCAATG------------TA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 28 I 10
s Tolypeutes_matacus.TolMat_scaffold_31955                   22522 11 -     31044 C----CAACACTT------------TG
i Tolypeutes_matacus.TolMat_scaffold_31955               I 28 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483859 11 -    610378 C----CAGCCCTT------------TA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23908 11 +     26378 C----CAGCAGCG------------TA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36706 11 -     78344 C----CAGCAGCG------------TA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23233 11 +     25722 C----CAGCAGCG------------TA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31662 11 -     62838 C----CAGCAGCG------------TA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31653 11 +     46913 C----CAGCAGCG------------TA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12391 11 -     28527 C----CAGCAGCG------------TA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33593 11 -     64340 C----CAGCAGCG------------TA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31631 11 -     63452 C----CAGCAGCG------------TA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13082 11 +     22490 C----CAGCAGCG------------TA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1048 11 +      9911 C----CAGCAGCG------------TA
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          843 11 -     33539 C----CAGCAGCG------------TA
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258602 11 -   6242583 C----CAGCAGCG------------TA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4621 11 +     19340 C----CAGCAGCG------------TA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177734 11 -    200418 C----CAGCACTT------------TA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485535 11 -  10818551 c----cagaaCTT------------TA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839495 11 -   4065304 T----CAGCGCTG------------CA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13588 11 -     70247 T----CAGCAGTG------------CA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369101 11 -  33153633 C----CAGCTCTT------------TA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7291 11 -     21056 C----TAGTCTTT------------TA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185415 11 +   5085361 C----CAACACTT------------TA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   80233 11 +   5488506 C----CAGCACTT------------TA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108766 11 -    112863 A----CAGCACTT------------TA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        177964 11 -    224448 C----CAGCACTG------------TA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32417 11 -     86975 C----CAGTACTT------------CA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1063 11 +      3447 C----CAGCTCTT------------TA
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Nannospalax_galili.KL204047.1                             950156 17 +   3037898 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Zapus_hudsonius.ZapHud_scaffold_11398                       4514  0 -     63895 C
e Sigmodon_hispidus.SigHis_scaffold_20193                    52716 15 +     77746 I
e Rattus_norvegicus.chr16                                 37025869 17 -  90668790 I
e Psammomys_obesus.NESX01036366.1                            40662 17 +     52041 I
e Peromyscus_maniculatus.KI615324.1                         250931 17 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377                    7712 17 -     41509 I
e Ondatra_zibethicus.OndZib_scaffold_7387                    97170 17 -    140218 I
e Mus_spretus.CM004101.1                                  39500209 17 + 130317789 I
e Mus_pahari.LT608297.1                                   58219252 17 +  89631738 I
e Mus_musculus.chr8                                       41691290 17 + 129401213 I
e Mus_caroli.LT608237.1                                   35597750 17 + 120012414 I
e Microtus_ochrogaster.CM001695.1                         15966555 17 +  27267610 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53128 17 -    140813 I
e Jaculus_jaculus.JH725527.1                               1242770 296 +   9596543 I
e Ellobius_talpinus.LOJH01026522.1                           17069 17 +     18970 I
e Ellobius_lutescens.LOEQ01008920.1                          35140 17 +    110024 I
e Cricetulus_griseus.LT883664.1                          213118941 17 - 224834208 I
e Cricetomys_gambianus.CriGam_scaffold_14425                 47428 16 -     83289 I
e Castor_canadensis.CasCan_scaffold_39952                    31579  0 -     39886 C
e Allactaga_bullata.AllBul_scaffold_20030                    21217 300 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28733 17 +     63021 I

a score=0.000000
s hg38.chrUn_KI270755v1                                       9976 37 +     36723 GGA----T-TTGC-A---TACT-T---------------AA-C----------A-TG----CTT-A----------TAC-T-GCC-AT-AA-------AG
s Acinonyx_jubatus.LLWD01001279.1                           816466 39 +   1699592 GGA----T-TTGA-A---CACT-T---------------A--T----------A-AGCT-ACTC-A----------TCG-T-GTT-AT-AA-------AG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     28750 20 +     63021 -----------------------------------------------------------------CTAGCTAGTG-AAC-T-AT--CT-AA---------
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 17 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20418972 39 +  29979442 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-CTC-AT-AA-------AG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            218970 39 +    347723 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTT-AT-AA-------AG
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    21517 18 -     61208 -AATTTGC-TGA--T---T-TC-T---------------A--A----------C----------------------------------------------
i Allactaga_bullata.AllBul_scaffold_20030                I 300 I 11
s Allenopithecus_nigroviridis.k141_3755588                   50919 40 +     53615 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2947 40 +     13857 GGA----G-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACCC-G----------TAC-T-GCC-GT-AA-------AG
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19503 40 -     21945 GGA----G-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACCC-G----------TAC-T-GCC-GT-AA-------AG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21188 40 +     32033 GGA----G-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACCC-G----------TAC-T-GCC-GT-AA-------AG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74443 40 -     84148 GGA----T-TTGA-A---TACT-T---------------GA-C----------A-TGCT-ACTC-A----------TAG-A-GCC-AT-AA-------AG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46687 50 -     78289 GGA----T-TTGA-A---TACT-T---------------GA-CTACTTGATTTG-TGCT-ACTC-A----------TAG-A-GCC-AT-AA-------AG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46113 40 +     55831 GGA----T-TTGA-A---TACT-T---------------GA-C----------A-TGCT-ACTC-A----------TAG-A-GCC-AT-AA-------AG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44575 40 -     64179 GGA----T-TTGA-A---TACT-T---------------GA-C----------A-TGCT-ACTC-A----------TAG-A-GCC-AT-AA-------AG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1682 50 -      3959 GGA----T-TTGA-A---TACT-T---------------GA-CTACTTGATTTG-TGCT-ACTC-A----------TAG-A-GCC-AT-AA-------AG
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43200 40 +     45454 GGA----T-TTGA-A---TACT-T---------------GA-C----------A-TGCT-ACTC-A----------TAG-A-GCC-AT-AA-------AG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48849 40 +     70886 GGA----T-TTGA-A---TACT-T---------------GA-C----------A-TGCT-ACTC-A----------TAG-A-GCC-GT-AA-------AG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11019 40 +     30854 GGA----T-TTGA-A---TACT-T---------------GA-C----------A-TGCT-ACTC-A----------TAG-A-GCC-AT-AA-------AG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35155 40 +     42133 GGA----T-TTGA-A---TACT-T---------------GA-C----------A-TGCT-ACTC-A----------TAG-A-GCC-AT-AA-------AG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592175 39 +   2318259 aaa----t-ttga-a---aact-t---------------a--c----------a-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180581 39 -    412891 GGA----C-TGGG-A---TACT-T---------------A--C----------A-CACT-ACTC-A----------TGC-T-GTC-AT-AA-------AG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53331 39 -     68529 AAG----T-TTGA-A---AACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3360 40 +     17741 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-C-ACC-AT-AA-------AG
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             3985 40 -     15923 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-C-ACC-AT-AA-------AG
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674267 40 +   5030052 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-C-ACC-AT-AA-------AG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4261 40 -     16391 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-C-ACC-AT-AA-------AG
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3820 40 -     17186 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-C-ACC-AT-AA-------AG
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27433 38 -     32367 GGA----T-GCA--A---ACAC-T---------------G--C----------A-GGCA-ACCC-A----------TAC-T-GC-CAT-CA-------AG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9095 39 -     15198 GGA----C-GTGG-A---TTCT-C---------------A--C----------A-CACC-ATTC-A----------TGC-T-GTC-AT-AA-------AG
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276918 40 +  21539123 GGA----T-TTGA-A---TACT-T---------------GA-C----------A-TGCT-ACCC-A----------TAG-T-GCC-AT-AA-------AG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13083 40 +     48076 GGA----T-TTGA-A---TACT-T---------------GA-C----------A-TGCT-ACCC-A----------TAG-T-GCC-AT-AA-------AG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8219 40 -     28759 GGA----T-TTGA-A---TACT-T---------------GA-C----------A-TGCT-ACCC-A----------TAG-T-GCC-AT-AA-------AG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35775 40 +     44353 GGA----T-TTGA-A---TACT-T---------------GA-C----------A-TGCT-ACCC-A----------TAG-T-GCC-AT-AA-------AG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51145 40 -     71267 GGA----T-TTGA-A---TACT-T---------------GA-C----------A-TGCT-ACCC-A----------TAG-T-GCC-AT-AA-------AG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25203 40 -     33135 GGA----T-TTGA-A---TACT-T---------------GA-C----------A-TGCT-ACCC-A----------TAG-T-GCC-AT-AA-------AG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966827 39 -  23207421 GGA----T-TTGA-A---CACT-T---------------A--C----------A-AGCG-ACTC-A----------TAC-T-GTT-AT-AA-------AG
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3328 39 -     25979 GGA----T-TTGA-A---CACT-T---------------A--C----------A-AGCG-ACTC-A----------TAC-T-GTT-AT-AA-------AG
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93164 39 +    124022 AAA----T-TTGA-A---AATT-T---------------A--C----------A-AGCT-ACTC-A----------TAT-T-GTC-AT-AA-------AG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36363 39 +    288883 AAG----T-TTGA-A---AAGT-T---------------A--C----------A-AGCT-ACTC-A----------TTC-T-GTC-AT-AA-------AG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423504 39 -  48749331 AAG----T-TTGA-A---AAGT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      769105 39 +   1948126 aag----t-ttga-a---aagt-t---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559650 39 -  45695690 AAG----T-TTGA-A---AAGT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536331 39 -   4408762 AAG----T-TTGA-A---AAGT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                  10000 40 +     28062 GGA----T-TTGA-A---CACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-AA-------AG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45291 40 -     91139 GGA----T-TTGA-A---CACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-AA-------AG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22818 40 +     95584 GGA----T-TTGA-A---CACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-AA-------AG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22731 40 +    119600 GGA----T-TTGA-A---CACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-AA-------AG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12352 39 +     18648 GGA----T-TTGA-A---TACT-T---------------CA-C----------A-TGCT-A-TC-A----------TAC-T-GCC-AT-AG-------AG
i Callibella_humilis.k141_1233062                        C 0 I 8
s Callimico_goeldii.k141_1609886                             11859 39 -     13885 GGG----T-TTGA-A---CGCT-T---------------AA-C----------A-TGCT-A-TC-A----------TAG-T-GCG-AT-AG-------AG
i Callimico_goeldii.k141_1609886                         C 0 I 38
s Callithrix_geoffroyi.k119_459277                            3958 39 -      8861 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-C-TC-A----------TAC-T-GCC-AT-AG-------AG
i Callithrix_geoffroyi.k119_459277                       C 0 I 108
s Callithrix_jacchus.pat_scaffold_3                      165456354 39 + 189096842 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-C-TC-A----------TAC-T-GCC-AT-AG-------AG
i Callithrix_jacchus.pat_scaffold_3                      C 0 I 78
s Callithrix_kuhlii.k119_102356                               3874 39 +      8664 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TACT-C-TC-A----------TAC-T-GCC-AT-AG-------AG
i Callithrix_kuhlii.k119_102356                          C 0 I 108
s Camelus_bactrianus.KN276810.1                            7634870 39 +  17673402 GAA----T-TTGA-A---TACT-T---------------A--T----------A-TGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4669171 39 +   7040546 GAA----T-TTGA-A---TACT-T---------------A--T----------A-TGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1212869 39 +   1652518 GAA----T-TTGA-A---TACT-T---------------A--T----------A-TGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42508911 39 +  60362399 GGA----T-TTGA-A---TACT-T---------------A--G----------A-AG-TGACTC-A----------TAC-T-GTC-AT-AA-------GG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12546 39 -     23171 GGA----T-TTGA-A---TACT-T---------------A--G----------A-AG-TGACTC-A----------TAC-T-GTC-AT-AA-------GG
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225887 39 +   9314153 GGA----T-TTGA-A---TACT-T---------------A--G----------A-AG-TGACTC-A----------TAC-T-GTC-AT-AA-------GG
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41619024 39 +  59632846 GGA----T-TTGA-A---TACT-T---------------A--G----------A-AG-TGACTC-A----------TAC-T-GTC-AT-AA-------GG
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110605 39 -  63665305 GGA----T-TTGA-A---TACT-T---------------A--G----------A-AG-TGACTC-A----------TAC-T-GTC-AT-AA-------GG
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416179 39 -  46296322 aaa----t-ttga-a---aact-t---------------a--c----------a-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598176 39 +  44709034 aaa----t-ttga-a---aact-t---------------a--c----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2105 21 -     20114 ------------------------------------------C----------A-TGTT-GC-T-G----------TAC-T--C--AT-AA-------AA
i Capromys_pilorides.CapPil_scaffold_26391               I 10 C 0
s Carlito_syrichta.NW_007259797.1                           274377 40 +    496798 GGA----T-TTGA-A---TACT-T---------------GG-C----------A-GATT-ACTC-A----------AAC-T-GAC-AT-AA-------AG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               3969 39 +      9923 GGA----T-TTGG-G---TACT-T---------------A--C----------A-CACG-ACTC-A----------TCC-T-GTC-AT-AA-------AG
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83179 39 -    217609 AGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              5000075 21 +  23392119 ------------------------------------------C----------A-TATT-AC-T-C----------TAC-T--C--AT-AA-------AG
i Cavia_aperea.AVPZ01000300.1                            I 10 C 0
s Cavia_porcellus.DS562891.1                               5003516 21 +  23407841 ------------------------------------------C----------A-TATT-AC-T-C----------TAC-T--C--AT-AA-------AG
i Cavia_porcellus.DS562891.1                             I 10 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          401 21 -    143979 ------------------------------------------C----------A-TATT-AC-T-C----------TAC-T--C--AT-AA-------AG
i Cavia_tschudii.CavTsc_scaffold_8919                    I 10 C 0
s Cebuella_niveiventris.k141_592277                           7269 39 -     12580 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-A-TC-A----------TAC-T-GCC-AT-AG-------AG
i Cebuella_niveiventris.k141_592277                      C 0 I 54
s Cebuella_pygmaea.k141_145798                               45324 39 +     53515 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-A-TC-A----------TAC-T-GCC-AT-AG-------AG
i Cebuella_pygmaea.k141_145798                           C 0 I 54
s Cebus_albifrons.Contig27                                  376057 40 -  26074798 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------CAG-T-GCC-GT-AA-------AG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10127 40 -     34880 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------CAG-T-GCC-GT-AA-------AG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69224 40 -     89041 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------CAG-T-GCC-GT-AA-------AG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2040 40 -     76265 GGA----T-TTGA-A---TACT-T---------------GG-C----------A-GACT-ACTC-A----------AAC-T-GAC-AT-AA-------AG
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495502 39 -  27778364 GGA----T-TTGA-A---TATT-C---------------A--C----------A-AGCT-ACTG-G----------GAC-T-ATC-AT-AA-------AG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22335 39 +     27315 GGA----T-TTGA-A---TATT-C---------------A--C----------A-AGCT-ACTG-G----------GAC-T-ATC-AT-AA-------AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                144003 40 -   4669795 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-GCTC-G----------TAC-T-GCC-GT-AA-------AG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_1522556                       47736 40 +     47900 GGA----T-TTGA-C---CGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Cercocebus_chrysogaster.k141_1522556                   C 0 N 0
s Cercocebus_lunulatus.k141_2500334                           3175 40 -     14410 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-GCTC-A----------TAC-T-GCC-GT-AA-------AG
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47557 40 -    148725 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-GCTC-A----------TAC-T-GCC-GT-AA-------AG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29834 40 -     40656 GGA----T-TTGA-C---TGCT-T---------------AG-T----------G-TGCT-GCTC-A----------CAC-T-GCC-GT-GA-------AG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9793 40 +     20796 GGA----T-TTGA-C---TGCT-T---------------AG-C----------G-TGCT-GCTC-A----------CAC-T-GCC-GT-GA-------AG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14907 40 -     17524 GGA----T-TTGA-C---TGCT-T---------------AG-C----------G-TGCT-GCTC-A----------TAC-T-GCC-GT-GA-------AG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30640 40 -     34525 GGA----T-TTGA-C---TGCT-T---------------AG-C----------G-TGCT-GCTC-A----------TAC-T-GCC-GT-GA-------AG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14418 40 -     25376 GGA----T-TTGA-C---TGCT-T---------------AG-C----------G-TGCT-GCTC-A----------CAC-T-GCC-CT-GA-------AG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367007 40 -  39242232 GGA----T-TTGA-C---TGCT-T---------------AG-C----------G-TGCT-GCTC-A----------CAC-T-GCC-GT-GA-------AG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272732 40 +  21565898 GGA----T-TTGA-C---TGCT-T---------------AG-C----------G-TGCT-GCTC-A----------CAC-T-GCC-CT-GA-------AG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35099 40 -     45857 GGA----T-TTGA-C---TGCT-T---------------AG-C----------G-TGCT-GCTC-A----------CAC-T-GCC-GT-GA-------AG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30000 40 -     32606 GGA----T-TTGA-C---TGCT-T---------------AG-C----------G-TGCT-GCTC-A----------CAC-T-GCC-GT-GA-------AG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6166 29 +      8499 --------------------CT-T---------------AG-C----------G-TGCT-GCTC-A----------CAC-T-GCC-GT-GA-------AG
i Cercopithecus_petaurista.k141_42573                    I 7 C 0
s Cercopithecus_pogonias.k141_6079                           28560 40 +     70610 GGG----T-TTGA-C---TGCT-T---------------AG-C----------G-TGCT-GCTC-A----------CGC-T-GCC-GT-GA-------AG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25522 40 +     36323 GGA----T-TTGG-C---TGCT-T---------------AG-C----------A-TGCT-GCTC-A----------TAC-T-GCC-CT-GA-------AG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15425 39 -     19938 GGA----T-TTGA-A---TATT-T---------------A--C----------A-GGCT-GTTC-A----------CAC-A-GTC-AT-AA-------AG
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            11093 40 -     32913 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-GA-------AG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21506 40 -     40346 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-GA-------AG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21760 40 +    216457 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-GA-------AG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21550 40 +     39636 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-GA-------AG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33633 47 -     52013 gga----t-ttga-a---tact-t---------------aa-c----------a-tgct-acTC-G-AG-TA-TGTGAG-T-GCC-AT-CG-------AG
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44632 40 -    112038 GGA----T-TTGA-A---CACT-T---------------AA-C----------A-TGCT-ACTC-A----------CAG-T-GCC-AT-AA-------AG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10182 40 +     34062 GGA----T-TTGA-A---CACT-T---------------AA-C----------A-TGCT-ACTC-A----------CAG-T-GCC-AT-AA-------AG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346422 40 +  18827391 GGA----G-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       12961 40 -     44032 GGA----G-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307808 40 - 135778131 GGA----G-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTT-G----------TAC-T-GCC-GT-AA-------AG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2121 19 +     10270 GGA----T-TTGA-A---TGTG-T---------------T--C----------A-GG-------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 I 12
s Choloepus_hoffmanni.KN194906.1                            609598 19 -    839153 GGA----T-TTGA-A---TATG-T---------------T--C----------A-GG-------------------------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 12
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2345 40 -      4087 GAA----T-TAAAAA---AACT-T---------------A--C----------A-GGCT-ACTC-A----------CAC-T-GTC-AT-AA-------AG
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412217 40 -   2368649 GGA----T-TTCA-C---TGCT-T---------------AG-C----------A-TGCT-GCTC-A----------TAC-T-GCT-GT-AA-------CG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382099 40 - 200372422 GGA----T-TTCA-C---TGCT-T---------------AG-C----------A-TGCT-GCTC-A----------TAC-T-GCC-GT-AA-------TG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5652 40 -     84244 GGA----T-TTCA-C---TGCT-T---------------AG-C----------A-TGCT-GCTC-A----------TAC-T-GCC-GT-AA-------TG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810678 40 +  53390261 TGA----T-TTGA-A---TACT-TA--------------A--C----------A-AATT-ATTC-A----------TAG-A-GCC-AT-AA-------AG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6249 39 -      8242 AGA----T-TTGA-A---TACT-T---------------A--C----------G-AACT-GTAC-A----------CAC-C-GTC-AT-AA-------AA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47444 20 -     83289 -----------------------------------------------------------------ctAGCTAGTG-AGC-T-AC--CT-AA---------
i Cricetomys_gambianus.CriGam_scaffold_14425             I 16 C 0
s Cricetulus_griseus.LT883664.1                          213118958 20 - 224834208 -----------------------------------------------------------------CTAGTTAATT-AAT-T-AC--CT-AA---------
i Cricetulus_griseus.LT883664.1                          I 17 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12495 38 +     12657 GGA----T-TTAA-A---TGCT-T---------------A--C----------T-TGAT-ACTC-A----------AAC-T-GTC-TT--A-------GC
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7853 39 +     87169 GTA----T-TTGA-A---CACT-T---------------A--C----------A-AGCT-ACTC-A----------TCC-T-ATC-AT-AC-------AG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650129 38 -   1526836 AGA----T-TCA-AA---TGCA-T---------------A--T----------A-GGCT-GCCT-A----------TAT-T-GC--AT-AA-------AG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22778 21 +     50838 ------------------------------------------C----------A-TGCT-GC-T-C----------TAC-T--T--GT-AA-------AA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 10 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12266 21 +     36344 ------------------------------------------C----------A-TATT-AC-T-C----------TAC-T--C--AT-AA-------AG
i Cuniculus_paca.CunPac_flattened_line_7025              I 10 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31706 21 +     75252 ------------------------------------------C----------A-TATT-AC-T-C----------TAC-T--C--AT-AG-------AG
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 10 C 0
s Dasypus_novemcinctus.JH564415.1                          2112784 39 -   2246927 GGA----T-TGGA-A---TATT-T---------------A--C----------A-GGCC-GTTT-A----------TGC-A-GTC-AT-AA-------TG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635239 39 -  35494412 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-GA-------AG
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11868961 39 -  20541912 GGA----T-TTGG-A---TGCT-T---------------A--C----------A-CACA-ACTC-A----------CAC-T-GTC-GT-AA-------AG
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667773 39 -   1390856 GGA----T-TTGA-A---TATT-T---------------A--C----------A-AGCT-ACTG-A----------TAC-T-ATC-AT-AA-------AG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142578 39 -    198055 GGA----T-TTGA-A---TATT-T---------------G--C----------A-AGCT-ACTG-A----------TAC-T-ATC-AT-AA-------AG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955310 17 -  37912305 -------------------------------------------------------------CCT-T----------AAC-T-GC-CCT-AA-------TG
i Dipodomys_ordii.KN672350.1                             I 15 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                    922 17 +     14058 -------------------------------------------------------------CCT-T----------AAC-T-GC-CCT-AA-------TG
i Dipodomys_stephensi.DipSte_scaffold_77284              I 15 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 12839 21 +     14636 ------------------------------------------C----------A-TATT-AC-T-C----------TAC-T--C--AT-AA-------AG
i Dolichotis_patagonum.DolPat_scaffold_80628             I 10 C 0
s Echinops_telfairi.JH980293.1                            62858457 39 - 111700974 GAA----T-TCAA-A---AACT-T---------------G--C----------A-GGCC-ACTC-A----------TAC-T-GCC-AT-AA-------TG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9614 39 +     19438 GGA----T-TTGA-A---TACT-A---------------A--T----------A-AACT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       245965 39 -    607251 AAG----T-TTGA-A---AACT-T---------------A--C----------A-AGCT-CCTC-A----------TAC-T-GTC-AT-AA-------AG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35157 20 +    110024 -----------------------------------------------------------------CTAACTAATG-AGC-T-AC--CT-AA---------
i Ellobius_lutescens.LOEQ01008920.1                      I 17 C 0
s Ellobius_talpinus.LOJH01026522.1                           17086 20 +     18970 -----------------------------------------------------------------CTAACTAATG-AGC-T-AC--CT-AA---------
i Ellobius_talpinus.LOJH01026522.1                       I 17 C 0
s Elephantulus_edwardii.JH947257.1                         9113504 24 -  10337057 taa----t-ttaa-a---aact-t---------------a--C----------A-GGTT-ACT-------------------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 11
s Enhydra_lutris.KZ291758.1                               24925504 39 +  41312741 GGA----T-TTGA-A---TACT-T---------------A--T----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582730 39 +  14770903 GGA----T-TTGA-A---TACT-T---------------G--C----------A-CACT-ATTC-A----------TAC-T-GTC-AT-AA-------AG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045239 39 -   4378816 gga----t-ttga-a---tatt-t---------------a--c----------a-agct-actc-a----------tat-t-atc-ct-aa-------ag
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379169 39 +  39960074 gga----t-ttga-a---tatt-t---------------a--c----------a-agct-actc-a----------tat-t-atc-ct-aa-------ag
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415151 39 -    498745 gga----t-ttga-a---tatt-t---------------a--c----------a-agct-actc-a----------tat-t-atc-ct-aa-------ag
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671449 39 +   7059049 GGA----T-TTGA-A---TACT-T---------------A--A----------A-AGCT-GTTT-A----------TAT-G-GTC-AT-AA-------AG
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265950 40 +  21539334 GGA----G-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74441 40 -    133382 GGA----T-TTGA-A---TACT-T---------------A--C----------AAAGCT-ACTC-A----------TGC-T-GTC-AT-AA-------AG
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2164 39 +     25849 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250468 39 - 206538554 GGA----T-TTGA-A---CACT-T---------------A--T----------G-AGCT-ACTC-A----------TCC-T-GTT-AT-AA-------AG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120424 39 - 205367284 GGA----T-TTGA-A---CACT-T---------------A--T----------G-AGCT-ACTC-A----------TCC-T-GTT-AT-AA-------AG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  1066 39 +     25330 GGA----T-TTGA-A---CACT-T---------------A--T----------G-AGCT-ACTC-A----------TCC-T-GTT-AT-AA-------AG
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2926070 21 -   3816255 ------------------------------------------T----------A-TGCT-GC-T-C----------TAC-T--C--AT-AA-------AG
i Fukomys_damarensis.KN121974.1                          I 10 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                5036 40 -     28519 GGA----T-TCAA-A---TACT-T---------------AA-C----------A-GGCT-ACTC-A----------TAC-T-GCT-AT-AA-------AG
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2223 39 +    660261 AAG----T-TTGA-A---CCTT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            5052 38 -      6791 GGA----C-TCA--A---TACT-T---------------A--C----------A-GGCT-TCCC-A----------TAC-T-GC-CAT-AA-------AG
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                726 40 -      2763 GGA----T-TTGC-A---TACT-T---------------AA-C----------A-TGCT-ACTT-A----------TAC-T-GCC-AT-AA-------AG
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                259146 40 - 186649187 GGA----T-TTGC-A---TACT-T---------------AA-C----------A-TGCT-ACTT-A----------TAC-T-GCC-AT-AA-------AG
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    6967 39 -     78134 GGA----C-TCA--A---TACT-T---------------C-CC----------A-GGCT-CCGC-A----------TAC-T-GC-CAT-AA-------TG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34228 37 -    327341 GGA----T-TTGA-A---CACT-G---------------A--C----------A-AA-T-ACTC-A----------TCC-T-GTT-AT-AC--------G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15890 39 +     48891 AAA----T-TTGA-A---AACT-T---------------A--C----------A-AGCT-ACTC-A----------TAT-T-GTC-AT-AA-------AG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938509 21 -  22651954 ------------------------------------------C----------A-TGCT-GC-T-C----------TAT-T--C--AT-AA-------AG
i Heterocephalus_glaber.JH602082.1                       I 10 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6208 39 +      8654 GAA----C-TCAC-A---GACA-C---------------A--G----------A-GG-TGACTC-T----------CAC-T-GCC-GT-AA-------AG
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11276 39 -     36432 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556321 39 -   1711038 GGA----T-TTGA-A---TACT-T---------------C--C----------A-AACT-GTAC-A----------TAC-C-ACC-AT-A-A------AG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                 37 46 -      8370 GGA----T-TTGA-A---TTCT-T---------------C--C----------A-AACT-GTAC-A----------TAC-C-ACC-AT-AAAGCATAAAG
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145609 40 -    630532 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-CGCT-ACTC-A----------TCC-T-GCC-AT-AA-------AG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73888 39 +     83186 GGA----T-TTGA-A---CACT-T---------------A--A----------A-AGCT-ACTC-A----------TTA-T-GTC-AT-AC-------AG
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75444 10 +    143317 GGA----T-TCT-AC---T---------------------------------------------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 10
s Hylobates_agilis.k141_1155965                               8656 40 +     12352 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAC-A-GCC-AT-AA-------AG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15843 40 +     55766 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAC-A-GCC-AT-AA-------AG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055371 40 + 191637585 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAC-A-GCC-AT-AA-------AG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804249 40 +  11177569 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAC-A-GCC-AT-AA-------AG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11308 21 -    135385 ------------------------------------------C----------C-TACT-GC-T-C----------TAC-T--C--AT-AA-------AG
i Hystrix_cristata.HysCri_scaffold_5660                  I 10 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390539 39 +   7955117 GGA----TGCAA--A---CCCT-C---------------A--C----------A-GGCA-ACCT-G----------TAC-T-AC-CGT-AA-------AG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13343 39 -     16823 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1243066 18 +   9596543 -AACTTGC-TGA--T---T-TT-T---------------A--A----------G----------------------------------------------
i Jaculus_jaculus.JH725527.1                             I 296 I 11
s Kogia_breviceps.KogBre_flattened_line_3970                 75181 39 -     97402 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45465 40 +    110728 GGG----T-TTGA-A---TACT-T---------------GA-C----------A-TGCT-ACCC-A----------TAG-T-GCC-AT-AA-------AG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    36140 39 -     49555 GGA----T-TTGA-A---TACT-T---------------G--C----------A-CACT-GTTC-A----------CAC-T-GTC-AT-AA-------AG
i Lasiurus_borealis.LasBor_scaffold_26245                C 0 I 282
s Leontocebus_fuscicollis.k141_3470480                         910 40 -     23187 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TA-AT-GCC-AT-CA-------AG
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1224 40 -     14280 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TA-AT-GCC-AT-CA-------AG
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         864 40 +      3713 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TA-AT-GCC-AT-CG-------AG
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1051 39 +      8855 GGA----T-TTGA-A---CACA-T---------------AA-C----------A-TGCT-A-TC-A----------TAG-T-GCC-AT-AG-------AG
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5852 39 -     13645 GGA----T-TTGA-A---CACA-T---------------AA-C----------A-TGCT-A-TC-A----------TAG-T-GCC-AT-AG-------AG
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816773 39 -   3914936 GGA----T-TTGA-A---TACT-T---------------A--T----------A-AGCT-ACTC-A----------TAC-T-ATC-AT-AA-------AG
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     21972 38 +     24238 AGA----T-TCC--C---ATCT-A---------------A--C----------A-ATCT-GCTT-A----------AAC-C-ATT-AT-GA-------AG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344525 39 +    662738 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-C-GTC-AT-AA-------AG
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336880 40 -   1826925 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39087941 39 +  43346337 GAA----T-TCAA-A---AACG-T---------------A--C----------A-GG-TGACTC-A----------TAC-C-GTC-AT-AA-------AG
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618179 39 +  59628241 GGA----T-TTGA-A---TACT-T---------------A--G----------A-AG-TGACTC-A----------TAC-T-GTC-AT-AA-------GG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48277 40 -     61512 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375939 40 -  60120075 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28207 40 +     30207 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3045 40 -      5035 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28160 40 +     30527 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39336 40 -     50087 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49081 40 +     51645 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418283 40 - 187317192 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402514 40 +  25927173 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51685 40 -     62418 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4216 40 +     14901 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48158 40 +     59329 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274065 40 +    668171 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2697 40 -      5049 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCT-GT-AA-------AG
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5864 40 +     17132 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226544 39 -    270270 GGA----T-TTGA-A---TACT-A---------------A--T----------A-AACT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325347 40 +  24302211 GGA----T-TTGA-C---CGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360178 40 -    752769 GGA----T-TTGA-C---CGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676813 39 -    737560 AGA----T-TTGA-A---TACG-T---------------A--T----------A-AGCT-GTGC-A----------TAC-T-GTT-AT-AA-------AA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             224109 39 +    317179 AGA----T-TTGA-A---TACG-T---------------A--T----------A-AGCT-GTGC-A----------TAC-T-GTT-AT-AA-------AG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504739 39 +  40650429 GGA----TGCAA--A---CCCT-C---------------A--C----------A-GGCA-ACCT-G----------TAC-T-AC-CAT-AA-------AG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       153938 39 +    207569 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AACT-ACAC-A----------TGC-T-GTC-AT-AA-------AG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29517 39 -     74585 GGA----T-TTGA-A---CACT-T---------------A--T----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53145 20 -    140813 -----------------------------------------------------------------CTAGTTAGTG-CGC-T-CT--CT-AA---------
i Meriones_unguiculatus.MerUng_scaffold_7390             I 17 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90809 39 +     93471 GGA----T-TTGG-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12461 39 +     17804 GGA----T-TTGA-A---TACT-T---------------CA-C----------A-TGCT-A-TC-A----------TAC-T-GCC-AT-AG-------AG
i Mico_argentatus.k141_582562                            C 0 I 8
s Mico_humeralifer.k141_1189820                                188 39 +      5551 GGA----T-TTGA-A---TACT-T---------------CA-C----------A-TGCT-A-TC-A----------TAC-T-GCC-AT-AG-------AG
i Mico_humeralifer.k141_1189820                          C 0 I 8
s Mico_schneideri.k141_1877700                                     21272 39 -     26561 GGA----T-TTGA-A---TACT-T---------------CA-C----------A-TGCT-A-TC-A----------TGC-T-GCC-AT-AG-------AG
i Mico_schneideri.k141_1877700                                 C 0 I 8
s Microgale_talazaci.MicTal_scaffold_6613                    49638 39 +    145209 GAA----T-TCAA-A---AGCT-T---------------A--C----------A-GGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188541 38 +    200668 GGA----T-TG-G-G---TACT-T---------------A--C----------A-CACT-ACTC-A----------TAC-T-GTC-AG-AA-------AG
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966572 20 +  27267610 -----------------------------------------------------------------CTAACTAATG-AGC-T-AC--CT-AA---------
i Microtus_ochrogaster.CM001695.1                        I 17 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368361 39 -   8254450 GGA----T-TTGA-A---TACT-T---------------A--C----------A-CACT-ACTC-A----------TAC-T-GTC-AT-AA-------AA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46092 39 -     48117 GGA----T-TTGA-A---TACT-T---------------A--C----------A-CACT-ACTC-A----------TAC-T-GTC-AT-AA-------AA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25446 40 -     27822 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12006 39 +     27589 GGA----T-TTGA-A---TACT-T---------------A--T----------A-AGCT-ACTC-A----------TAC-T-ATC-AT-AA-------AG
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362917 39 +    437263 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182956 39 +    366855 GGA----T-TTGA-A---TACT-T---------------A--A----------A-TGCC-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32121 39 -     82753 AAC----T-TTGA-A---AACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AG-AA-------AG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21977 38 -     63510 GGA----T-TTGA-A---CACT-G---------------A--C----------A-AGCT-ACTC-A----------TCC-T-GTT-AT-AC--------G
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45346 39 +     47283 GGA----T-TTGA-G---TACT-T---------------G--C----------A-CACT-ATTC-A----------TAC-T-GTC-AT-AA-------AG
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35597767 20 + 120012414 -----------------------------------------------------------------ctatCTAGAG-AGC-T-AC--CT-AA---------
i Mus_caroli.LT608237.1                                  I 17 C 0
s Mus_musculus.chr8                                       41691307 20 + 129401213 -----------------------------------------------------------------ctAGCTAGAG-AGC-T-AC--CT-AA---------
i Mus_musculus.chr8                                      I 17 C 0
s Mus_pahari.LT608297.1                                   58219269 20 +  89631738 -----------------------------------------------------------------ttAGCTAGAG-AGC-T-GC--CT-AA---------
i Mus_pahari.LT608297.1                                  I 17 C 0
s Mus_spretus.CM004101.1                                  39500226 20 + 130317789 -----------------------------------------------------------------ctAGCTAGAG-AGC-T-AC--CT-AA---------
i Mus_spretus.CM004101.1                                 I 17 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3064 38 -    124358 GGA----C-CCA--A---TACT-G---------------A--A----------A-GGCT-TCCG-A----------CAC-T-GC-CAT-AA-------AG
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358392 39 +  14710649 GGA----T-TTGA-A---TACT-T---------------A--T----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1163 21 -     27262 ------------------------------------------T----------G-TACG-GC-T-C----------TAC-T--C--AT-AA-------AA
i Myocastor_coypus.MyoCoy_scaffold_57531                 I 10 C 0
s Myotis_brandtii.KE162005.1                               9797351 39 +  10118263 GGA----T-TTGA-A---TACT-T---------------G--C----------A-CACT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391525 39 +   6019432 GGA----T-TTGA-A---TACT-T---------------G--C----------A-CACT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387564 39 +   4330536 GGA----T-TTGA-A---TACT-T---------------G--C----------A-CACT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6351 39 +     18357 GGA----T-TTGA-A---TACT-T---------------G--C----------A-CACT-ACTC-A----------TGC-T-GTC-AT-AA-------AG
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950173 11 +   3037898 -----------------------------------------------------------------T----------AGC-T-AC--AT-AA---------
i Nannospalax_galili.KL204047.1                          I 17 C 0
s Nasalis_larvatus.k141_1350636                              32231 40 +     34575 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469453 39 -  31847680 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-ATC-AT-AA-------AG
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235575 39 -   7148211 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131261 39 -    149072 GGA----T-TTGA-A---TACT-T---------------A--C----------A-CACT-ACTC-C----------TAC-T-GTC-AT-AA-------AG
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56544 40 -    132029 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAC-T-GCC-AT-AA-------AG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12639 40 -     16345 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAC-T-GCC-AT-AA-------AG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18528 40 +     22201 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAC-T-GCC-AT-AA-------AG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416758 40 -  22158432 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28933 40 -     54323 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201883 39 +   9404916 GGA----T-TTGA-A---CACT-T---------------A--G----------A-AG-TGACTC-A----------TAC-T-GTC-AT-AA-------GG
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059437 21 -  11899542 ------------------------------------------C----------A-TGCC-AC-T-C----------TAC-T--C--AT-AA-------AA
i Octodon_degus.JH651603.1                               I 10 C 0
s Odobenus_rosmarus.KB229312.1                             1455222 39 +   2017862 GGA----T-TTGA-A---TACT-T---------------A--T----------A-AGCT-ACTC-A----------TAC-T-ATC-AT-AA-------AG
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442517 39 -    630418 AAG----T-TTGA-A---AACT-T---------------A--C----------A-AGCT-ACTC-A----------CAC-T-GTC-AT-AA-------AG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22174 39 +    150152 AAG----T-TTGA-A---ACCT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97187 20 -    140218 -----------------------------------------------------------------ctAACTATTG-AGC-T-AC--CT-AA---------
i Ondatra_zibethicus.OndZib_scaffold_7387                I 17 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7729 20 -     41509 -----------------------------------------------------------------ctAGCTAATG-GGC-T-GT--CT-AA---------
i Onychomys_torridus.OnyTor_scaffold_28377               I 17 C 0
s Orcinus_orca.KB316932.1                                  8105988 39 +  10937097 gga----t-ttga-t---tttt-t---------------t--c----------a-agct-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               2977 39 +     11607 GAA----T-TCAA-A---AACC-T---------------A--C----------A-GGCT-ATTC-A----------CAC-T-GTC-AT-AA-------AA
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108633 39 - 174332312 GGA----T-TCC--C---ATCTGA---------------A--C----------A-ATCT-GCTT-A----------AAC-C-ATT-AT-GA-------AG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42833 39 +    559221 GGA----T-TTGA-A---TACT-T---------------C--G----------A-AG-TGACTC-A----------TAC-T-GTC-AT-AA-------GG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26410916 39 -  44047080 aaa----t-ttga-a---aact-t---------------a--c----------a-AGCT-ACTC-A----------TAT-T-GTC-AT-AA-------AG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11539 39 +     17875 AAA----T-TTGA-A---AACT-T---------------A--C----------A-AGCT-ACTC-A----------TAT-T-GTC-AT-AA-------AG
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02004363.1                                  544 40 +      1263 GGA----T-TTGC-A---TACT-T---------------AA-C----------A-TGCT-ACTT-A----------TAC-T-GCC-AT-AA-------AG
i Pan_paniscus.AJFE02004363.1                            I 207 I 19
s Pan_troglodytes.NBAG03003091.1                             16936 42 -     26668 GGA----T-TTGC-A---TACT-T---------------AA-C----------A-TGCT-ACTTTA----------TAC-TTGCC-AT-AA-------AG
i Pan_troglodytes.NBAG03003091.1                         I 11 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   28474 39 -    230217 GGA----T-TTGA-G---CACT-T---------------A--T----------A-AGCT-ACTC-A----------TCC-T-GTT-AT-AA-------AG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465706 39 -  18783137 GGA----T-TTGA-A---CACT-T---------------A--T----------A-AGCT-ACTC-A----------TCC-T-GTT-AT-AA-------AG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976307 39 +   8748460 GGA----T-TTGA-A---CACT-T---------------A--T----------A-AGCT-ACTC-A----------TCC-T-GTT-AT-AA-------AG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622434 39 +   2937107 aaa----t-ttga-a---aact-t---------------a--c----------a-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246362 40 - 183742232 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-AT-AA-------AG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12647 40 +     21308 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295390 40 -  20919399 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25289 40 -     27687 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    1966 40 +     10553 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-AT-AA-------AG
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1927 40 -     10386 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18643 39 +     78924 GGA----T-GTGA-A---CACT-T---------------A--T----------A-GGTT-ACTC-A----------TCT-T-GTC-AT-AA-------AG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7519 17 +      9367 -------------------------------------------------------------TTC-T----------TAC-A-GT-TTT-AT-------TG
i Perognathus_longimembris.PerPac_flattened_line_89005   I 15 C 0
s Peromyscus_maniculatus.KI615324.1                         250948 20 +  18517816 -----------------------------------------------------------------CTAGCTAATG-GGC-T-AT--CT-AA---------
i Peromyscus_maniculatus.KI615324.1                      I 17 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35509 21 -     56120 ------------------------------------------C----------T-TACT-GC-T-C----------TAC-T--T--AT-GA-------AG
i Petromus_typicus.PetTyp_scaffold_17301                 I 10 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7509 39 -     63832 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5612 40 +     55023 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-GCTC-A----------TAC-T-GCC-GT-AA-------AG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5135 40 -     89929 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-GCTC-A----------TAC-T-GCC-GT-AA-------AG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5723 40 +     40849 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-GCTC-A----------TAC-T-GCC-GT-AA-------AG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257452 40 +  14605196 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-GCTC-A----------TAC-T-GCC-GT-AA-------AG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7841 39 +     22231 GGA----T-TTGA-A---TACC-T---------------G--C----------A-CACT-ATTC-A----------TGC-T-GTC-AT-AA-------AG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             66978 40 +    207309 GGA----T-TTGA-A---CACT-G---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-AA-------AG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8073 40 -     25401 GGA----T-TTGA-A---CACT-G---------------AA-C----------A-TGCC-ACTC-A----------TAG-T-GCC-AT-AA-------AG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33819 40 +     58159 GGA----T-TTGA-A---CACT-G---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-AA-------AG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34095 40 +     63561 GGA----T-TTGA-A---CACT-G---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-AA-------AG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33850 40 +     51148 GGA----T-TTGA-A---CACT-G---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-AA-------AG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558826 40 -   4542175 GGA----T-TTGA-A---CACT-G---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-AA-------AG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33834 40 +     51125 GGA----T-TTGA-A---CACT-G---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-AA-------AG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4530 39 +     19503 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-TTC-AT-AA-------AG
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10265 40 +     39866 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-GA-------AG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5347 40 -      9282 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-GA-------AG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44751 40 -     87950 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-GA-------AG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45145 40 -     88961 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-GA-------AG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9843 40 -     39403 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-GA-------AG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44795 40 +     87928 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-GA-------AG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9842 40 -     60166 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-GA-------AG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16763 40 -     67232 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-GA-------AG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44695 40 -     90634 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-GA-------AG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46162 40 +     89403 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAG-T-GCC-AT-GA-------AG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182313 40 - 189387572 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTT-A----------TAC-T-GCC-AT-AA-------Ag
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197055 40 -   9816681 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTT-A----------TAC-T-GCC-AT-AA-------AG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30810 40 +     69807 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              47993 40 -     80239 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2740 39 -     12774 GAA----C-TCAC-A---GACA-C---------------A--G----------A-GG-TGACtc-t----------cac-t-gcc-gt-aa-------ag
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Psammomys_obesus.NESX01036366.1                            40679 20 +     52041 -----------------------------------------------------------------CTAGTTAGTG-CGC-T-CT--CT-GA---------
i Psammomys_obesus.NESX01036366.1                        I 17 C 0
s Pteronotus_parnellii.KE847780.1                            55615 39 -     66298 GGA----T-TTGA-A---TACT-T---------------A--C----------A-TGCT-ACTC-A----------TAC-T-ATC-AT-AA-------AG
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8001 39 -     18639 GGA----T-TAGA-A---TACT-T---------------A--T----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844160 39 -  28871421 GGA----T-TTGA-A---TGCT-A---------------A--T----------A-AACT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540676 39 -   4952924 GGA----T-TTGA-A---TGCT-A---------------A--T----------A-AACT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102692 39 +  38429054 GGA----T-TTGA-A---CACT-T---------------A--T----------A-AGCT-ACTC-A----------TCC-T-GTT-AT-AA-------AG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             30178 41 +     91421 GGG----T-TTGA-C---TGCT-T---------------AG-C----------ATTGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156729 41 -   7812017 GGG----T-TTGA-C---TGCT-T---------------AG-C----------ATTGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11029 41 +     72585 GGA----G-TTGA-C---TGCT-T---------------AG-C----------ATTGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5035 39 -     55207 AAG----T-TTGA-A---AACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37025886 20 -  90668790 -----------------------------------------------------------------ctAGCTAGAG-AGC-T-AC--CC-AA---------
i Rattus_norvegicus.chr16                                I 17 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918093 39 +   3329780 GGG----T-TTGA-A---TACT-T---------------A--C----------A-AACT-ACAC-A----------TAC-T-GCC-AT-AA-------AG
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4636 40 +      7119 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125306 40 + 195417433 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239478 40 -   7961872 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-AT-AA-------CG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78900 39 -    116970 GAA----T-TTGA-A---TACT-A---------------G--T----------A-AACT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9530 26 +     12412 gga----t-ttga-a---tact-t---------------aa-c----------a-tgct-acTC------------------------------------
i Saguinus_bicolor.k141_161125                           I 135 I 21
s Saguinus_geoffroyi.k141_356064                               852 26 +      9876 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC------------------------------------
i Saguinus_geoffroyi.k141_356064                         C 0 I 21
s Saguinus_imperator.k141_2710097                            16455 29 -     24931 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TA----------------------
i Saguinus_imperator.k141_2710097                        C 0 I 11
s Saguinus_inustus.k141_4502137                               1334 29 +      4564 GGA----T-TTGA-A---CACT-T---------------AA-C----------A-TGCT-ACTC-A----------TA----------------------
i Saguinus_inustus.k141_4502137                          C 0 I 11
s Saguinus_labiatus.k141_264497                               4139 29 -      7443 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TA----------------------
i Saguinus_labiatus.k141_264497                          C 0 I 11
s Saguinus_midas.LG03                                       395183 26 - 209938924 gga----t-ttga-a---tact-t---------------aa-c----------a-tgct-aCTC------------------------------------
i Saguinus_midas.LG03                                    I 135 I 11
s Saguinus_mystax.k141_6319370                                1756 29 +     10149 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TA----------------------
i Saguinus_mystax.k141_6319370                           C 0 I 11
s Saguinus_oedipus.k141_1368863                               1093 26 +     10417 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC------------------------------------
i Saguinus_oedipus.k141_1368863                          C 0 I 21
s Saiga_tatarica.SaiTat_scaffold_39512                       14486 39 +     16473 AAA----T-TTGA-A---AACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111225 40 + 121099817 GGA----T-TTGA-A---CACT-T---------------AA-C----------A-CGCT-ACTC-A----------CAG-T-GCC-AT-AA-------AG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32794 40 -     47369 GGA----T-TTGA-A---CACT-T---------------AA-C----------A-CGCT-ACTC-A----------CAG-T-GCC-AT-AA-------AG
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33177 40 -     79414 GGA----T-TTGA-A---CACT-T---------------AA-C----------A-CGCT-ACTC-A----------CAG-T-GCC-AT-AA-------AG
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29868 40 -     34454 GGA----T-TTGA-A---CACT-T---------------AA-C----------A-CGCT-ACTC-A----------CAG-T-GCC-AT-AA-------AG
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17270 40 -     22428 GGA----T-TTGA-A---CACT-T---------------AA-C----------A-CGCT-ACTC-A----------CAG-T-GCC-AT-AA-------AG
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32424 40 -     47109 GGA----T-TTGA-A---CACT-T---------------AA-C----------A-CGCT-ACTC-A----------CAG-T-GCC-AT-AA-------AG
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240447 40 +   5703754 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------CAG-T-GCC-AA-AA-------AG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10038 40 +     21866 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------CAG-T-GCC-AA-AA-------AG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122515 39 +    313613 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-AGTC-C----------TAC-T-ATC-AT-AA-------AG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1617 40 +     11297 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32010 40 +     58920 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18508 40 -     45317 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26166 40 -     42441 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28842 40 -     29113 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-AT-AA-------CG
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31931 39 -     48123 GTC----T-TGAA-A---TGGTGC---------------AG-C----------A-GA---ACTC-A----------TAC-T-ACC-GT-AA-------CG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52731 20 +     77746 -----------------------------------------------------------------ctAGCTAAGG-AGC-T-AC--CT-AA---------
i Sigmodon_hispidus.SigHis_scaffold_20193                I 15 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867263 40 -   1910179 GAA----T-TCAG-A---TACT-T---------------A--T----------A-AGCT-ACTC-A-A--------TAT-T-GTC-AT-AA-------AG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674508 39 +  18376816 GGA----T-ATGA-A---TGCT-T---------------A--C----------A-TGCT-ACTC-A----------TAC-C-GTT-AT-TA-------AC
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1872102 39 +   3870691 GGA----TGCAA--A---CCCT-C---------------A--C----------A-GGCA-ACCT-G----------TAC-T-AC-CGT-AA-------AG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16226 39 -     97271 GGA----T-TTGA-A---TACT-T---------------A--C----------C-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128853 38 +    196729 GGA----T-TTGA-A---CACT-G---------------A--C----------A-AGCT-ACTC-A----------TCC-T-GTT-AT-AC--------G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6648127 39 +  69701581 AGA----T-TTGA-A---TACT-T---------------A--C----------A-ATCT-ACTC-A----------CAC-T-ATC-AT-AA-------AG
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       394015 40 +   1523678 GGA----T-TTGA-A---TACT-T---------------AA-C----------A-TGCT-ACTC-A----------TAC-T-GCC-AT-AA-------AG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17559 39 +     22964 GGA----T-TTGA-A---TATT-T---------------A--C----------A-TACT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194960 39 +    199430 GGA----C-TTGA-A---TATT-T---------------A--C----------A-GGCT-ACTC-A----------TAC-T-ATC-AT-GA-------AG
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108940 39 -    539355 GGA----C-TTGA-A---TATT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-ATC-AT-GA-------AG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4568 40 +      9917 GGA----T-CTGA-A---TACT-T---------------GG-C----------G-GACT-ACTC-A----------AAC-T-GAC-AT-AA-------AG
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11364 40 +     20590 GGA----T-CTGA-A---TACT-T---------------GG-C----------G-GACT-ACTC-A----------AAC-T-GAC-AT-AA-------AG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356173 40 - 186847797 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------AG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27810 21 -     33621 ------------------------------------------C----------G-GACT-GT-T-C----------TAC-T--T--AT-TA-------AG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 10 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22533 39 -     31044 GGA----T-TTGA-A---TATT-T---------------A--C----------A-GGCT-GTTC-C----------TAC-A-GTC-AT-AA-------AG
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483870 39 -    610378 GGA----T-TTGG-A---TACT-T---------------A--C----------A-TACT-ACTC-A----------CAC-T-GTC-AT-AA-------AG
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23919 40 +     26378 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36717 40 -     78344 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23244 40 +     25722 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31673 40 -     62838 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31664 40 +     46913 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12402 40 -     28527 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33604 40 -     64340 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31642 40 -     63452 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13093 40 +     22490 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1059 40 +      9911 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          854 40 -     33539 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CA
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258613 40 -   6242583 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCT-GT-AA-------CG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4632 40 +     19340 GGA----T-TTGA-C---TGCT-T---------------AG-C----------A-TGCT-ACTC-A----------TAC-T-GCC-GT-AA-------CG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177745 39 -    200418 AAG----T-TTGA-A---TACT-T---------------G--C----------A-AGCT-ACTC-A----------TAG-T-GTC-AT-AA-------AG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485546 25 -  10818551 GAA----T-TCGC-A---AATG-T---------------A--C----------A-GGCA-ACTC------------------------------------
i Trichechus_manatus.JH594705.1                          C 0 I 12
s Tupaia_chinensis.KB320699.1                              1839506 55 -   4065304 GGC----T-TTGA-A---TACA-TAGCAGGCGACTACATAG-C----------A-GG-TGACTC-A----------TGC-T-GCC-AT-AG-------AG
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13599 40 -     70247 GGC----T-TTGA-A---TACA-T---------------AG-C----------A-GG-TGACTC-A----------TGC-T-GCC-AT-AG-------AG
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369112 39 -  33153633 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-GCTC-A----------TAC-T-GTC-AT-AA-------AG
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7302 39 -     21056 GGA----T-ATGA-A---CTCT-T---------------A--C----------A-AGCT-GCTC-A----------TAG-T-GTT-AT-AA-------AG
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185426 39 +   5085361 GGA----T-TTGA-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-CTC-AT-AA-------AG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   80244 39 +   5488506 GAA----T-TTGA-A---TACT-T---------------A--T----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108777 39 -    112863 GGA----T-TTGA-A---TACT-T---------------A--G----------A-AG-TGACTC-A----------TAC-T-GTC-AT-AA-------GG
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        177975 38 -    224448 AGA----A-CAA--A---CCCT-C---------------A--C----------A-GGCG-ACCT-G----------TAC-T-GC-CAT-AA-------AG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32428 39 -     86975 GGA----T-TTGA-A---TACT-T---------------A--T----------A-AGCT-ACTC-A----------TAC-T-ATC-AT-AA-------AG
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       4514 18 -     63895 -AATCTGC-TGA--C---C-TC-T---------------A--A----------C----------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 11
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1074 39 +      3447 GGA----T-TTGG-A---TACT-T---------------A--C----------A-AGCT-ACTC-A----------TAC-T-GTC-AT-AA-------AG
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Castor_canadensis.CasCan_scaffold_39952                    31579  0 -     39886 C

a score=0.000000
s hg38.chrUn_KI270755v1                                      10013 19 +     36723 TATGTAA-GGTGGA-AAGGAT
s Acinonyx_jubatus.LLWD01001279.1                           816505 19 +   1699592 TAGGTAA-GATAGA-AATTAC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419011 19 +  29979442 TAGGTAA-GGTAGA-AATTAT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            219009 19 +    347723 TAGGTAA-GGTAGA-AATTAC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50959 19 +     53615 TATGTAA-GGTGGA-GAGTAT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          2987 19 +     13857 TATGTAA-GGTGGA-GAGTAT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19543 19 -     21945 TATGTAA-GGTGGA-GAGTAT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21228 19 +     32033 TATGTAA-GGTGGA-GAGTAT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74483 19 -     84148 CATGTGA-GGTGGA-AAGTAT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46737 19 -     78289 CATGTGA-GGTGGA-AAGTAT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46153 19 +     55831 CATGTGA-GGTGGA-AAGTAT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44615 19 -     64179 CATGTGA-GGTAGA-AAGTAT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1732  8 -      3959 CATGTGA-G------------
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43240 19 +     45454 CATGTGA-GGTGGA-AAGTAT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48889 19 +     70886 CATGTGA-GGTGGA-AAGTAT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11059 19 +     30854 CATGTGA-GGTGGA-AAGTAT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35195 19 +     42133 CATGTGA-GGTAGA-AAGTAT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592214 19 +   2318259 TAGGCAA-GGTAGA-AATTAT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180620 19 -    412891 GAGGTAG-GGTGGC-AATTAT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53370 19 -     68529 TAGGTAA-GGTAGA-AATTAT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3400 19 +     17741 TATGTGA-GGTGGA-AAGCAT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4025 19 -     15923 TATGTGA-GGTGGA-AAGCAT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674307 19 +   5030052 TATGTGA-GGTGGA-AAGCAT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4301 19 -     16391 TATGTGA-GGTGGA-AAGCAT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3860 19 -     17186 TATGTGA-GGTGGA-AAGCAT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27471 19 -     32367 TAGCTAA-GGTGGA-AATCAT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9134 19 -     15198 TGGGTAG-GGTGGC-AGTTAT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276958 19 +  21539123 CATGTGA-GGTGGA-AAGTAT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13123 19 +     48076 CATGTGA-GGTGGA-AAGTAT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8259 19 -     28759 CATGTGA-GGTGGA-AAGTAT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35815 19 +     44353 CATGTGA-GGTGGA-AAGTAT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51185 19 -     71267 CATGTGA-GGTGGA-AAGTAT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25243 19 -     33135 CATGTGA-GGTGGA-AAGTAT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966866 18 -  23207421 TAGGTAC-GGTAGA--ATTAT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3367 18 -     25979 TAGGTAC-GGTAGA--ATTAT
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93203 19 +    124022 TAGACAA-GGTAGA-AATTAT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36402 17 +    288883 TAGGTGA-GGTAGA-AATT--
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423543 19 -  48749331 TAGGTGA-GGTAGA-AATTAT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      769144 19 +   1948126 TAGGTGA-GGTAGA-AATTAT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559689 19 -  45695690 TAGGTGA-GGTAGA-AATTAT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536370 19 -   4408762 TAGGTGA-GGTAGA-AATTAT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                  10040 16 +     28062 TATGTG--GGTGGA-AAGT--
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45331 16 -     91139 TATGTG--GGTGGA-AAGT--
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22858 16 +     95584 TATGTG--GGTGGA-AAGT--
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22771 16 +    119600 TATGTG--GGTGGA-AAGT--
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12399 11 +     18648 ---------GTGGA-AGGTAT
i Callibella_humilis.k141_1233062                        I 8 C 0
s Callithrix_geoffroyi.k119_459277                            4105 19 -      8861 TATGTGA-GGTGGC-AGGTAT
i Callithrix_geoffroyi.k119_459277                       I 108 C 0
s Callithrix_kuhlii.k119_102356                               4021 19 +      8664 TATGTGA-GGTGGA-AGGTAT
i Callithrix_kuhlii.k119_102356                          I 108 C 0
s Camelus_bactrianus.KN276810.1                            7634909 19 +  17673402 TAGGTAA-GGTAGA-AATTAT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4669210 19 +   7040546 TAGGTAA-GGTAGA-AATTAT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1212908 19 +   1652518 TAGGTAA-GGTAGA-AATTAT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42508950 19 +  60362399 TGGGTAA-GGTAGA-AATTAT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12585 19 -     23171 TGGGTAA-GGTAGA-AATTAT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225926 19 +   9314153 TGGGTAA-GGTAGA-AATTAT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41619063 19 +  59632846 TGGGTAA-GGTAGA-AATTAT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110644 19 -  63665305 TGGGTAA-GGTAGA-AATTAT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416218 19 -  46296322 TAGGCAA-GGTAGA-AATTAT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598215 19 +  44709034 TAGGCAA-GGTAGA-AATTAT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2126 19 -     20114 TAGCTAA-TGTAGG-ATTTTT
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274417 19 +    496798 TATGTAA-GGTGGA-AATTAT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               4008 19 +      9923 CAGGTAG-GGTGGC-AATTAT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83218 19 -    217609 TAGGTAA-GGTAGA-AATTAT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              5000096 19 +  23392119 TAGCTAA-GGTAGA-AATTGT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5003537 19 +  23407841 TAGCTAA-GGTAGA-AATTGT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          422 19 -    143979 TAGCTAA-GGTAGA-AATTGT
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_niveiventris.k141_592277                           7362 19 -     12580 TATGTGA-AGTGGA-AGGTAT
i Cebuella_niveiventris.k141_592277                      I 54 C 0
s Cebuella_pygmaea.k141_145798                               45417 19 +     53515 TATGTGA-AGTGGA-AGGTAT
i Cebuella_pygmaea.k141_145798                           I 54 I 54
s Cebus_albifrons.Contig27                                  376097 19 -  26074798 CATGTGA-GGTGGA-AAGTAC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10167 19 -     34880 CATGTGA-GGTGGA-AAGTAC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69264 19 -     89041 CATGTGA-GGTGGA-AAGTAC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2080 19 -     76265 TATGTAA-GGTGGA-AATTAT
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495541 19 -  27778364 TAGGTAA-GGTGGA-AATTAT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22374 19 +     27315 TAGGTAA-GGTGGA-AATTAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                144043 19 -   4669795 TATGTAA-GGTGGA-GAGTAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                           17 19 +      3297 TATGTAA-GGTGGA-GAGTAT
i Cercocebus_chrysogaster.k141_697306                    N 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3215 19 -     14410 TATGTAA-GGTGGA-GAGTAT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47597 19 -    148725 TATGTAA-GGTGGA-GAGTAT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29874 19 -     40656 TATGTAA-GGTGGA-GAGCAT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9833 19 +     20796 TATGTAA-GGTGGA-GAGTAT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14947 19 -     17524 TATGTAA-GGTGGA-GAGGAT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30680 19 -     34525 TATGTAA-GGTGGA-GAGTAT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14458 19 -     25376 TATGTAA-GGTGGA-GGGCAT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367047 19 -  39242232 TATGTAA-GGTGGA-GAGCAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272772 19 +  21565898 TATGTAA-GGTGGA-GGGCAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35139 19 -     45857 TATGTAA-GGTGCA-GAGTAT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30040 19 -     32606 TATGTAA-GGTGGA-GAGCAT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6195 19 +      8499 TATGTAA-GGTGGA-GAGCAT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28600 19 +     70610 TATGTAA-GGTGGA-GGGCAT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25562 19 +     36323 TATGTAA-GGTGGA-GAGGAT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15464 19 -     19938 TAGGTAA-GGTGGA-AATTAT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            11133 19 -     32913 TGTGTGA-GGTGGA-AAATGT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21546 19 -     40346 TGTGTGA-GGTGGA-AAATGT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21800 19 +    216457 TGTGTGA-GGTGGA-AAATGT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21590 19 +     39636 TGTGTGA-GGTGGA-AAATGT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33680 19 -     52013 TATGTG-AGGTGGA-AAGTAT
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44672 15 -    112038 TATGTG--GGTGGA-A---AT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10222 15 +     34062 TATGTG--GGTGGA-A---AT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346462 19 +  18827391 TATGTAA-GGTGGA-GAGTAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13001 19 -     44032 TATGTAA-GGTGGA-GAGTAT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307848 19 - 135778131 TATGTAA-GGTGGA-GAGTAT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2152 19 +     10270 AAGGTAA-GGTGGA-AATTAT
i Choloepus_didactylus.ChoDid_scaffold_147047            I 12 I 4
s Choloepus_hoffmanni.KN194906.1                            609629 19 -    839153 aaggtaa-ggtgga-aaTTAT
i Choloepus_hoffmanni.KN194906.1                         I 12 I 4
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2385 19 -      4087 TAGATAA-TGTGGA-AATGAT
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412257 19 -   2368649 TGTGTCA-GGTGGA-AGGTAT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382139 19 - 200372422 TGTGTCA-GGTGGA-AGGTAT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5692 19 -     84244 TGTGTCA-GGTGGA-AGGTAT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810718 19 +  53390261 AAGGTAC-AGTGGA-AATAAT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6288 19 -      8242 TAAGTAA-GGTAGA-GATTAT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12533 19 +     12657 TAGGTAA-GACAGA-AATTat
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7892 19 +     87169 TAGGTAA-GGTAGA-AATTAT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650167 19 -   1526836 TAGCTAA-GGAGGA-AATTAT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22799 19 +     50838 TAGTTAA-TGTAGG-AATTCC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12287 19 +     36344 TAGCTGA-AGTAGA-AATTGT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31727 19 +     75252 TAGCTAA-GGTAAA-AATTAT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2112823 18 -   2246927 TAGGTAA--GTGGA-AAGTTT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635278 18 -  35494412 TAGGTGA-GGTAGA--ATTAT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11869000 19 -  20541912 TAGGAAG-GGTGGC-AATTAT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667812 19 -   1390856 TAGGTAA-GGTGGA-AATTAT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142617 19 -    198055 TAGGTAA-GGTGGA-AATTAT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955327  3 -  37912305 TAG------------------
i Dipodomys_ordii.KN672350.1                             C 0 I 4
s Dipodomys_stephensi.DipSte_scaffold_77284                    939  3 +     14058 TAG------------------
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 I 4
s Dolichotis_patagonum.DolPat_scaffold_80628                 12860 19 +     14636 TAGCTAA-GGTAGA-AATTGT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62858496 19 - 111700974 TAGGTAA-GGTGGA-AATTAT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9653 19 +     19438 TAGGTAA-GGTGGA-AATTAT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       246004 19 -    607251 TAGGCAA-GGTAGA-AATTAT
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9113539 19 -  10337057 CAGATAA-AATGGA-CAGTGA
i Elephantulus_edwardii.JH947257.1                       I 11 C 0
s Enhydra_lutris.KZ291758.1                               24925543 19 +  41312741 TAGGTAA-GGTAGA-AATTAT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582769 19 +  14770903 TAGGTAA-GGTGGA-AATTAT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045278 19 -   4378816 taggtaa-ggtgga-aaTTAT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379208 19 +  39960074 taggtaa-ggtgga-aaTTAT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415190 19 -    498745 taggtaa-ggtgga-aaTTAT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671488 19 +   7059049 TTGGTAA-GGTGGA-AATTAT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               265990 19 +  21539334 TATGTAA-GGTGGA-GAGTAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74481 18 -    133382 TAGGTAA-GGTAGA--ATTAT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2203 18 +     25849 TAGGTAA-GGTAGA--ATTAT
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250507 19 - 206538554 TAGGTAA-GATAGA-AATTAC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120463 19 - 205367284 TAGGTAA-GATAGA-AATTAC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  1105 19 +     25330 TAGGTAA-GATAGA-AATTAC
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2926091 19 -   3816255 CAGCTAA-GGTAGA-AATTAT
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                5076 19 -     28519 TAAGTAA-GGTGGA-AATTAT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2262 19 +    660261 CAGGTAA-GGTAGA-AATTAT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            5090 19 -      6791 CAGCTAA-GGTGGA-AGTTAC
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                766 19 -      2763 TATGTAA-GGTGGA-AAGGAT
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                259186 19 - 186649187 TATGTAA-GGTGGA-AAGGAT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    7006 19 -     78134 CAGCTAA-GGTGGA-AGTTAC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34265 19 -    327341 TAGGTAA-GGTAGA-AATTAT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15929 19 +     48891 TAGGCAA-GGTAGA-AATTAT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938530 19 -  22651954 TAGCTAA-GGTAAA-AATTAT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6247 19 +      8654 CAGGTAA-GGTGGA-AATTCT
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11315 19 -     36432 TAGGTAA-GGTAGA-AATTAT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556360 19 -   1711038 TGGGTAA-AGTGGA-AATTAT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                 83 19 -      8370 TGGGTAA-AGTGGA-AATTAT
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145649 19 -    630532 TATGTAA-GGTGGA-AAGTAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73927 19 +     83186 TAGGTAA-GGTAGA-AATGAT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75464 19 +    143317 TAGCTAA-GGTAGA-AATTGT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 10 C 0
s Hylobates_agilis.k141_1155965                               8696 19 +     12352 TATGTAA-GGTGGA-AAGTAT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15883 19 +     55766 TAAGTAA-GGTGGA-AAGTAT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055411 19 + 191637585 TAAGTAA-GGTGGA-AAGTAT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804289 19 +  11177569 TAAGTAA-GGTGGA-AAGTAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11329 19 -    135385 CAGCTAA-AATGGA-AATTAT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390578 19 +   7955117 TAGCTAA-GGTGGA-AATCAT
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13382 18 -     16823 TAGGTAA-GGTAGA--ATTAT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75220 18 -     97402 TAGGTAA-GGTAGA--ATTAT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45505 19 +    110728 CATGTGA-GGTGGA-AAGTAT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1456 19 -     25587 TAGGTAA-GGTGGA-AATTAT
i Lasiurus_borealis.LasBor_scaffold_61236                I 50 C 0
s Leontocebus_fuscicollis.k141_3470480                         950 19 -     23187 TATGTGA-GGTGGA-AAGTAT
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1264 19 -     14280 TATGTGA-GGTGGA-AAGTAT
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         904 19 +      3713 TATGTGA-GGTGGA-AAGTAT
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1090 19 +      8855 TATGTGA-GGTGGA-AAGTGT
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5891 19 -     13645 TATGTGA-GGTGGA-AAGTGT
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816812 19 -   3914936 TAGGTAA-Ggtaga-aattat
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     22010 19 +     24238 TTGGTAA-GATGGA-AATGAC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344564 18 +    662738 TAGGTAA-GGTAGA--ATTAT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336920 19 -   1826925 TATGTAA-GGTGGA-GAGTAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39087980 19 +  43346337 TAGGTAA-GGTGGA-AATTAT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618218 19 +  59628241 TGGGTAA-GGTAGA-AATTAT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48317 19 -     61512 TATGTAA-GGTGGA-GAGTAT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375979 19 -  60120075 TATGTAA-GGTGGA-GAGTAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28247 19 +     30207 TATGTAA-GGTGGA-GAGTAT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3085 19 -      5035 TATGTAA-GGTGGA-GAGTAT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28200 19 +     30527 TATGTAA-GGTGGA-GAGTAT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39376 19 -     50087 TATGTAA-GGTGGA-GAGTAT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49121 19 +     51645 TATGTAA-GGTGGA-GAGTAT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418323 19 - 187317192 TATGTAA-GGTGGA-GAGTAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402554 19 +  25927173 TATGTAA-GGTGGA-GAGTAT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51725 19 -     62418 TATGTAA-GGTGGA-GAGTAT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4256 19 +     14901 TATGTAA-GGTGGA-GAGTAT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48198 19 +     59329 TATGTAA-GGTGGA-GAGTAT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274105 19 +    668171 TATGTAA-GGTGGA-GAGTAT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2737 19 -      5049 TATGTAA-GGTGGA-GAGTAT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5904 19 +     17132 TATGTAA-GGTGGA-GAGTAT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226583 19 -    270270 TAGGTAA-GGTGGA-AATTAT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325387 19 +  24302211 TATGTAA-GGTGGA-GAGTAT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360218 19 -    752769 TATGTAA-GGTGGA-GAGTAT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676852 19 -    737560 TAGGTAA-AGTGGA-AATTAT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             224148 19 +    317179 TAGGTAA-AGTGGA-AATTAT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504778 19 +  40650429 TAGCTAA-GGTGGA-AATCAT
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       153977 19 +    207569 TAGGTAA-GGTGGA-AATCAT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29556 19 -     74585 TAGGTAA-AGTAGA-AATTAT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90848 18 +     93471 TAGGTAA-GGTAGA--ATTAT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12508 11 +     17804 ---------GTGGA-AGGTAT
i Mico_argentatus.k141_582562                            I 8 C 0
s Mico_humeralifer.k141_1189820                                235 11 +      5551 ---------GTGGA-AGGTAT
i Mico_humeralifer.k141_1189820                          I 8 C 0
s Mico_schneideri.k141_1877700                                     21319 11 -     26561 ---------GTGGA-AGGTAT
i Mico_schneideri.k141_1877700                                 I 8 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49677 19 +    145209 TAGATAA-GGTGGA-AATTAT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188579 19 +    200668 TAGGTAG-GGTGGC-AATTAT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368400 14 -   8254450 TAG------GTGGA-AATTAT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46131 14 -     48117 TAG------GTGGA-AATTAT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25486 19 -     27822 TGTGTAA-GGTGGA-GAGGAT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12045 19 +     27589 TAGGTAA-GGTAGA-AATTAT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362956 18 +    437263 TAGGTAA-GGTAGA--ATTAT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 182995 19 +    366855 TAGGTAG-GGTGGC-AATTAT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32160 19 -     82753 TAGGTAA-GGTAGA-AATTAT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   22015 19 -     63510 TAGGTAA-GGTAGA-AATTAT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45385 19 +     47283 TAGGTAA-GATGGA-AATTAT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3102 19 -    124358 CAGCTAC-GGTGGA-TGTAAC
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358431 19 +  14710649 TAGGTAA-GGTAGA-AATTAT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1184 19 -     27262 TAGCTAG-TGTAGG-TATTCT
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797390 19 +  10118263 TAGGTAA-GGTGGA-AATTAT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391564 19 +   6019432 TAGGTAA-GGTGGA-AATTAT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387603 19 +   4330536 TAGGTAA-GGTGGA-AATTAT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6390 19 +     18357 TAGGTAA-GGTGGA-AATTAT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nasalis_larvatus.k141_1350636                              32271 19 +     34575 TATGTAA-GGTGGA-AAGTAT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469492 19 -  31847680 TAGGTAA-Ggtaga-aattat
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235614 18 -   7148211 TAGGTAA-GGTAGA--ATTAT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131300 19 -    149072 TAGGTAA-GGTGGC-AATTAT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56584 19 -    132029 TATGTAA-GGTGGA-AAGTAT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12679 19 -     16345 TATGTAA-GGTGGA-AAGTAT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18568 19 +     22201 TATGTAA-GGTGGA-AAGTAT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416798 19 -  22158432 TATGTAA-GGTGGA-AAGTAT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28973 19 -     54323 TATGTAA-GGTGGA-AAGTAT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201922 19 +   9404916 TGGGTAA-GGTAGA-AATTAT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059458 19 -  11899542 TAACTAA-TTTAGG-AATTCT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1455261 19 +   2017862 TAGGTAA-GGTAGA-AATTAT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442556 19 -    630418 TAGGCAA-GGTAGA-AATTAT
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22213 19 +    150152 TAGGTAA-GGTAGA-AATTAT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Orcinus_orca.KB316932.1                                  8106027 18 +  10937097 TAGGTAA-GGTAGA--ATTAT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3016 19 +     11607 TAGATAA-AGTGGA-AATTAT
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108672 18 - 174332312 TTGGTAA-GATG-A-AATGAC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42872 19 +    559221 TGGGTAA-GGTAGA-AATTAT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26410955 19 -  44047080 TAGGCAA-GGTAGA-AATTAT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11578 19 +     17875 TAGGCAA-GGTAGA-AATTAT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  545 19 +      1186 TATGTAA-GGTGGA-AAGGAT
i Pan_paniscus.AJFE02001037.1                            I 40 I 22
s Pan_troglodytes.NBAG03003091.1                             16978 20 -     26668 TATGTAA-GGTGGAGAAGGAT
i Pan_troglodytes.NBAG03003091.1                         C 0 I 139
s Panthera_onca.PanOnc_flattened_line_3271                   28513 19 -    230217 TAGGTAA-GATAGA-AATTAC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465745 19 -  18783137 TAGATAA-GATAGA-AATTAC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976346 19 +   8748460 TAGGTAA-GATAGA-AATTAC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622473 19 +   2937107 TAGGCAA-GGTAGA-AATTAT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246402 19 - 183742232 TATGTAA-GGTGGA-GAGTAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12687 19 +     21308 TATGTAA-GGTGGA-GAGTAT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295430 19 -  20919399 TATGTAA-GGTGGA-GAGTAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25329 19 -     27687 TATGTAA-GGTGGA-GAGTAT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2006 19 +     10553 TATGTAA-GGTGGA-GAGTAT
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1967 19 -     10386 TATGTAA-GGTGGA-GAGTAT
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18682 19 +     78924 TAGGTAA-GGTAGA-AATTAC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7536  3 +      9367 TAG------------------
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 5
s Petromus_typicus.PetTyp_scaffold_17301                     35530  9 -     56120 TAGCTAA-GG-----------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7548 18 -     63832 TAGGTAA-GGTAGA--ATTAT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5652 19 +     55023 TGTGTAA-GGTGGA-AAGTAT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5175 19 -     89929 TGTGTAA-GGTGGA-AAGTAT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5763 19 +     40849 TGTGTAA-GGTGGA-AAGTAT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257492 19 +  14605196 TGTGTAA-GGTGGA-AAGTAT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7880 19 +     22231 TAGGTAA-GGTGGA-AAGTAT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             67018 18 +    207309 TATGTG--GGTGGA-AAGTAT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8113 18 -     25401 TATGTG--GGTGGA-AAGTAT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33859 18 +     58159 TATGTG--GGTGGA-AGGTAT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34135 18 +     63561 TATGTG--GGTGGA-AAGTAT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33890 18 +     51148 TATGTG--GGTGGA-AAGTAT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558866 18 -   4542175 TATGTG--GGTGGA-AAGTAT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33874 18 +     51125 TATGTG--GGTGGA-AAGTAT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4569 18 +     19503 TAGGTAA-GGTAGA--ATTAT
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10305 19 +     39866 TGTGTGA-GGTGGA-AAGAAT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5387 19 -      9282 TGTGTGA-GGTGGA-AAGAAT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44791 19 -     87950 TGTGTGA-GGTGGA-AAGAAT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45185 19 -     88961 TGTGTGA-GGTGGA-AAGAAT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9883 19 -     39403 TGTGTGA-GGTGGA-AAGAAT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44835 19 +     87928 TGTGTGA-GGTGGA-AAGAAT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9882 19 -     60166 TGTGTGA-GGTGGA-AAGAAT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16803 19 -     67232 TGTGTGA-GGTGGA-AAGAAT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44735 19 -     90634 TGTGTGA-GGTGGA-AAGAAT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46202 19 +     89403 TGTGTGA-GGTGGA-AAGAAT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182353 19 - 189387572 tatgtaa-ggtgga-aaggat
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197095 19 -   9816681 TACGTAA-GGTGGA-AAGGAT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30850 19 +     69807 TATGTAA-GGTGGA-AAGTAT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48033 19 -     80239 TATGTAA-GGTGGA-AAGTAT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2779 19 -     12774 caggtaa-ggtgga-aattct
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55654 19 -     66298 AAGGTAG-GGTGGC-AATTAT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8040 19 -     18639 TAGGTAA-GGTAGA-AATTAT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844199 19 -  28871421 TAGGTAA-GGTGGA-AATTAT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540715 19 -   4952924 TAGGTAA-GGTGGA-AATTAT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102731 19 +  38429054 TAGGTAA-GATAGA-AATTAC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             30219 19 +     91421 TATGTAA-GGTGGA-AAGTAT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156770 19 -   7812017 TATGTAA-GGTGGA-AAGTAT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11070 19 +     72585 TATGTAA-GGTGGA-AAGTAT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5074 19 -     55207 TAGGCAA-GGTAGA-AATTAT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918132 19 +   3329780 TAGGTAA-AGTGGA-AATTAT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4676 19 +      7119 TATGTAA-GGTGGA-AAGTAT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125346 19 + 195417433 TATGTAA-GGTGGA-AAGTAT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239518 19 -   7961872 TATGTAA-GGTGGA-AAGTAT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78939 19 -    116970 TAGGTAA-GGTAGA-AATTAT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9577 19 +     12412 TATGTGA-GGTGGA-AAGTAT
i Saguinus_bicolor.k141_161125                           I 21 C 0
s Saguinus_geoffroyi.k141_356064                               899 19 +      9876 TATGTGA-GGTGGA-AGGTAT
i Saguinus_geoffroyi.k141_356064                         I 21 C 0
s Saguinus_imperator.k141_2710097                            16495 19 -     24931 TATGTGA-GGTGGA-AAGTAT
i Saguinus_imperator.k141_2710097                        I 11 C 0
s Saguinus_inustus.k141_4502137                               1374 19 +      4564 TATGTGA-GGTGGA-AAGTAT
i Saguinus_inustus.k141_4502137                          I 11 C 0
s Saguinus_labiatus.k141_264497                               4179 19 -      7443 TATGTGA-GGTGGA-AAGTAT
i Saguinus_labiatus.k141_264497                          I 11 C 0
s Saguinus_midas.LG03                                       395220 11 - 209938924 ---------GTGGA-AAGTAT
i Saguinus_midas.LG03                                    I 11 C 0
s Saguinus_mystax.k141_6319370                                1796 19 +     10149 TATGTGA-GGTGGA-AAGTAT
i Saguinus_mystax.k141_6319370                           I 11 C 0
s Saguinus_oedipus.k141_1368863                               1140 19 +     10417 TATGTGA-GGTGGA-AGGTAT
i Saguinus_oedipus.k141_1368863                          I 21 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14525 19 +     16473 TAGGCAA-GGTAGA-AATTAC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111265 19 + 121099817 TATGTGA-GGTGGA-AAGTAC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32834 19 -     47369 TATGTGA-GGTGGA-AAGTAC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33217 19 -     79414 TATGTGA-GGTGGA-AAGTAC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29908 19 -     34454 TATGTGA-GGTGGA-AAGTAC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17310 19 -     22428 TATGTGA-GGTGGA-AAGTAC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32464 19 -     47109 TATGTGA-GGTGGA-AAGTAC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240487 19 +   5703754 TATGTGA-GGTGGA-AAGTAT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10078 19 +     21866 TATGTGA-GGTGGA-AAGTAT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122554 19 +    313613 AAGGTAA-AGAGGA-AATAAT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1657 19 +     11297 TGTGTAA-GGTGGA-AAGTAT
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32050 19 +     58920 TATGTAA-GGTGGA-AAGTAT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18548 19 -     45317 TATGTAA-GGTGGA-AAGTAT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26206 19 -     42441 TATGTAA-GGTGGA-AAGTAT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28882 19 -     29113 TGTGTAA-GGTGGA-AAGTAT
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31970 19 -     48123 TGTGTAA-GGTGAA-AAGTAT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867303 16 -   1910179 TAGGTAA-GGTGGA-AAT---
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674547 19 +  18376816 TAGGTAA-CACAGA-AATTAT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1872141 19 +   3870691 TAGCTAA-GGTGGA-AATCAT
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16265 19 -     97271 TAGGTAA-GGTAGA-AATTAT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128891 19 +    196729 TAGGTAA-GGTAGA-AATTAT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6648166 19 +  69701581 TTGGTAA-AGTAGA-AATTAT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       394055 19 +   1523678 TATGTAA-GGTGGA-AAGTAT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17598 19 +     22964 TAGGTAA-GGTGGA-AATTAT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      194999 19 +    199430 TAGGTAA-GGTGGA-AACTAT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108979 19 -    539355 TAGGTAA-GGTGGA-AACTAT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4608 19 +      9917 TATGTAA-GGTGGA-AATTAT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11404 19 +     20590 TATGTAA-GGTGGA-AATTAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356213 19 - 186847797 TATGTAA-GGTGGA-GAGTAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27831 19 -     33621 TAGTTAA-GGTAGA-AATTAA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22572 19 -     31044 TAGGTAA-GGTGGA-AATTAT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483909 19 -    610378 TAGGCAG-GGTGGC-AATTAT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        23959 19 +     26378 TATGTAA-GGTGGA-AAGTAT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36757 19 -     78344 TATGTAA-GGTGGA-AAGTAT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23284 19 +     25722 TATGTAA-GGTGGA-AAGTAT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31713 19 -     62838 TATGTAA-GGTGGA-AAGTAT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31704 19 +     46913 TATGTAA-GGTGGA-AAGTAT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12442 19 -     28527 TATGTAA-GGTGGA-AAGTAT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33644 19 -     64340 TATGTAA-GGTGGA-AAGTAT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31682 19 -     63452 TATGTAA-GGTGGA-AAGTAT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13133 19 +     22490 TATGTAA-GGTGGA-AAGTAT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1099 19 +      9911 TATGTAA-GGGGGA-AAGTAT
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          894 19 -     33539 TATGTAA-GGTGGA-AAGTAT
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258653 19 -   6242583 TATGTAA-GGTGGA-AAGTAT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4672 19 +     19340 TATGTAA-GGTGGA-AAGTAT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177784 19 -    200418 TGGGTAA-GGTAGA-AATTAT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485583 19 -  10818551 TAGGTGA-GGTGAG-AATTAT
i Trichechus_manatus.JH594705.1                          I 12 C 0
s Tupaia_chinensis.KB320699.1                              1839561 19 -   4065304 TGTATAG-TTTGGA-GATGAC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13639 19 -     70247 TGTATAG-TTTGGA-GATTAC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369151 18 -  33153633 TAGGTAA-GGTAGA--ATTAT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7341 19 -     21056 AAGGTAG-AGTGGA-AGTAAT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185465 19 +   5085361 TAGGTAA-GTTAGA-AATTAT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   80283 19 +   5488506 TAGGTAA-GGTAGA-AATTAT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108816 19 -    112863 TAGGTAA-GGTAGA-AATTAT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        178013 19 -    224448 TAGCTAT-GGTGGA-AATCAT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32467 19 -     86975 TAGGTAA-GGTAGA-AATTAT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1113 18 +      3447 TAGGTAA-GGTAGA--ATTAT
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Nannospalax_galili.KL204047.1                             950184  0 +   3037898 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Zapus_hudsonius.ZapHud_scaffold_11398                       4532 11 -     63895 I
e Sigmodon_hispidus.SigHis_scaffold_20193                    52751  0 +     77746 C
e Rattus_norvegicus.chr16                                 37025906  0 -  90668790 C
e Psammomys_obesus.NESX01036366.1                            40699  0 +     52041 C
e Peromyscus_maniculatus.KI615324.1                         250968  0 +  18517816 C
e Onychomys_torridus.OnyTor_scaffold_28377                    7749  0 -     41509 C
e Ondatra_zibethicus.OndZib_scaffold_7387                    97207  0 -    140218 C
e Mus_spretus.CM004101.1                                  39500246  0 + 130317789 C
e Mus_pahari.LT608297.1                                   58219289  0 +  89631738 C
e Mus_musculus.chr8                                       41691327  0 + 129401213 C
e Mus_caroli.LT608237.1                                   35597787  0 + 120012414 C
e Microtus_ochrogaster.CM001695.1                         15966592  0 +  27267610 C
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Meriones_unguiculatus.MerUng_scaffold_7390                 53165  0 -    140813 C
e Jaculus_jaculus.JH725527.1                               1243084 11 +   9596543 I
e Ellobius_talpinus.LOJH01026522.1                           17106  0 +     18970 C
e Ellobius_lutescens.LOEQ01008920.1                          35177  0 +    110024 C
e Cricetulus_griseus.LT883664.1                          213118978  0 - 224834208 C
e Cricetomys_gambianus.CriGam_scaffold_14425                 47464  0 -     83289 C
e Castor_canadensis.CasCan_scaffold_39952                    31579  0 -     39886 C
e Callithrix_jacchus.pat_scaffold_3                      165456393 78 + 189096842 I
e Callimico_goeldii.k141_1609886                             11898 38 -     13885 I
e Allactaga_bullata.AllBul_scaffold_20030                    21535 11 -     61208 I
e Acomys_cahirinus.AcoCah_scaffold_21377                     28770  0 +     63021 C

a score=0.000000
s hg38.chrUn_KI270755v1                                      10032 22 +     36723 ATTGT----CTTTTAGTG-T--GG--G------T--A---------------CA
s Acinonyx_jubatus.LLWD01001279.1                           816524 22 +   1699592 ATTGT----CTCCTAGCA-T--GC--A------T--A---------------TA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     28770 16 +     63021 ----------CACTAGCA-T--GG--A------T--A---------------TA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419030 22 +  29979442 ATTGT----CTCCTAGCA-T--GG--G------C--A---------------TA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            219028 22 +    347723 ATTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    21546 16 -     61208 ----------CACTTATG-T--GG--G------A--A---------------TA
i Allactaga_bullata.AllBul_scaffold_20030                I 11 C 0
s Allenopithecus_nigroviridis.k141_3755588                   50978 22 +     53615 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3006 22 +     13857 GTTGT----CCTCCAGCG-T--GG--G------T--A---------------CA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19562 22 -     21945 GTTGT----CCTCCAGCG-T--GG--G------T--A---------------CA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21247 22 +     32033 GTTGT----CCTCCAGCG-T--GG--G------T--A---------------CA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74502 22 -     84148 GTTGT----CTTCTAGTG-T--GG--G------G--A---------------CA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46756 22 -     78289 GTTGT----CTTCTGGTG-T--GG--G------C--A---------------CA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46172 22 +     55831 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44634 22 -     64179 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1740 19 -      3959 ---GT----CTTCTGGTG-T--GG--G------C--A---------------CA
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43259 22 +     45454 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48908 22 +     70886 GTTGT----CTTCTGGTG-T--GG--G------C--A---------------CA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11078 22 +     30854 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35214 22 +     42133 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592233 22 +   2318259 CCTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180639 19 -    412891 ATTGT----CTCCTACCA-T--GG--G------T--------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 5
s Antilocapra_americana.AntAmePen_scaffold_21030             53389 22 -     68529 ACTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3419 22 +     17741 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4044 22 -     15923 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674326 22 +   5030052 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4320 22 -     16391 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3879 22 -     17186 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27490 22 -     32367 ATTGT----CTCCTGGTG-T--AG--G------T--G---------------TG
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9153 19 -     15198 ATTGT----CTCCTGGCA-T--GG--A------T--------------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 5
s Ateles_geoffroyi_b.tarseq_1536                               276977 22 +  21539123 GTTGT----CTTCTAGTG-C--GG--G------C--A---------------CA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13142 22 +     48076 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8278 22 -     28759 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35834 22 +     44353 GTTGT----CTTCTAGTG-C--GG--G------C--A---------------CA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51204 22 -     71267 GTTGT----CTTCTAGTG-C--GG--G------C--A---------------CA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25262 22 -     33135 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966884 22 -  23207421 ATTGT----CTCCTAGCT-T--GG--G------T--A---------------TA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3385 22 -     25979 ATTGT----CTCCTAGCT-T--GG--A------T--A---------------TA
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93222 21 +    124022 CCTGT----CTCCTAGCA-T--GG--G------T--A---------------T-
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36419 12 +    288883 --------------AGCA-T--GG--G------T--A---------------TA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423562 22 -  48749331 ACTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      769163 22 +   1948126 ACTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559708 22 -  45695690 ACTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536389 22 -   4408762 ACTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                  10056 22 +     28062 GTTGT----CTTCCAGTG-T--GG--G------C--A---------------CA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45347 22 -     91139 GTTGT----CTTCCAGTG-T--GG--G------C--A---------------CA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22874 22 +     95584 GTTGT----CTTCCAGTG-T--GG--G------C--A---------------CA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22787 22 +    119600 GTTGT----CTTCCAGTG-T--GG--G------C--A---------------CA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12410 22 +     18648 GCTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11936  3 -     13885 ------------------------------------A---------------CA
i Callimico_goeldii.k141_1609886                         I 38 C 0
s Callithrix_geoffroyi.k119_459277                            4124 22 -      8861 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456471 17 + 189096842 ---------CTTCCAGTG-T--GG--G------C--A---------------CA
i Callithrix_jacchus.pat_scaffold_3                      I 78 C 0
s Callithrix_kuhlii.k119_102356                               4040 22 +      8664 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7634928 22 +  17673402 ATTGT----CTCATAGCA-T--GG--G------T--A---------------TA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4669229 22 +   7040546 ATTGT----CTCATAGCA-T--GG--G------T--A---------------TA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1212927 22 +   1652518 ATTGT----CTCATAGCA-T--GG--G------T--A---------------TA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42508969 22 +  60362399 ATTAT----CCTCTAGCT-T--GG--G------T--A---------------TA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12604 22 -     23171 ATTAT----CCTCTAGCT-T--GG--G------T--A---------------TA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225945 22 +   9314153 ATTAT----CCTCTAGCT-T--GG--G------T--A---------------TA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41619082 22 +  59632846 ATTAT----CCTCTAGCT-T--GG--G------T--A---------------TA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110663 22 -  63665305 ATTAT----CCTCTAGCT-T--GG--G------T--A---------------TA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416237 22 -  46296322 CCTGT----TTCCTAGCA-T--GG--G------T--A---------------TA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598234 22 +  44709034 CCTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2145 22 -     20114 ATTGT----CTTCTGTAG-T--GGTTG------T--C-----------------
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274436 22 +    496798 ACTAT----CTCTTAGTA-T--GG--G------T--A---------------TC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               4027 18 +      9923 ATCGT----CTCCTAGCA-T--G---A------T--------------------
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 5
s Catagonus_wagneri.CatWag_scaffold_2839                     83237 20 -    217609 ATTGT----CTCCTGGCA-T--GG--G------T--A-----------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 2
s Cavia_aperea.AVPZ01000300.1                              5000115 20 +  23392119 ATTGT----CTCCAATCA-T--GA--G------T--A-----------------
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5003556 20 +  23407841 ATTGT----CTCCAATCT-T--GA--G------T--A-----------------
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          441 20 -    143979 ATTGT----CTCCAATCT-T--GA--G------T--A-----------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_niveiventris.k141_592277                           7381 22 -     12580 GCTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45490 22 +     53515 GCTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Cebuella_pygmaea.k141_145798                           I 54 C 0
s Cebus_albifrons.Contig27                                  376116 22 -  26074798 GTTGT----CTTGTAGTG-T--GG--G------C--A---------------CA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10186 22 -     34880 GTTGT----CTTGTAGTG-T--GG--G------C--A---------------CA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69283 22 -     89041 GTTGT----CTTGTAGTG-T--GG--G------C--A---------------CA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2099 22 -     76265 ACTAT----CTCTTAGTG-T--GG--G------T--A---------------TC
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495560 20 -  27778364 ATTGT----CTCCCAGCA-C--GG--G------T--C-----------------
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22393 20 +     27315 ATTGT----CTCCCAGCA-C--GG--G------T--C-----------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                144062 22 -   4669795 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                           36 22 +      3297 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3234 22 -     14410 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47616 22 -    148725 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29893 22 -     40656 GTTGG----CCTCCAGTG-T--GG--G------C--A---------------CA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9852 22 +     20796 GTTGT----CCTCTGGTG-T--GG--G------C--A---------------CA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14966 22 -     17524 GTTGG----CCTCTAGTG-T--GG--G------C--A---------------CA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30699 22 -     34525 GTTGG----CCTCTAGTG-T--GG--G------C--A---------------CA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14477 22 -     25376 GTTGG----CCTCTGGTG-T--GG--G------C--A---------------CA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367066 22 -  39242232 GTTGG----CCTCTGGTG-T--GG--G------C--A---------------CA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272791 22 +  21565898 GTTGG----CCTCTGGTG-T--GG--G------C--A---------------CA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35158 22 -     45857 GTTGG----CCTCTAGTG-T--GG--G------C--A---------------CA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30059 22 -     32606 GTTGG----CCTCCAGTG-T--GG--G------C--A---------------CA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6214 22 +      8499 GTTGG----CCTCTGGTG-T--GG--G------C--A---------------CA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28619 22 +     70610 GTTGG----CCTCTGGTG-T--GG--G------C--A---------------CA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25581 22 +     36323 GTTGG----CCTCTAGTG-T--GG--G------C--A---------------CA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15483 22 -     19938 ATTAT----CTCCCAGCA-T--GG--G------T--G---------------TA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            11152 22 -     32913 GTTGT----CTTCTCGTG-T--GG--G------C--A---------------CA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21565 22 -     40346 GTTGT----CTTCTCGTG-T--GG--G------C--A---------------CA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21819 22 +    216457 GTTGT----CTTCTCGTG-T--GG--G------C--A---------------CA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21609 22 +     39636 GTTGT----CTTCTCGTG-T--GG--G------C--A---------------CA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33699 22 -     52013 GCCGT----CTTCTCGTG-T--GG--G------C--A---------------CA
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44687 22 -    112038 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10237 22 +     34062 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346481 22 +  18827391 GTTGT----CCTCCAGCG-T--GG--G------T--A---------------CA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13020 22 -     44032 GTTGT----CCTCCAGCG-T--GG--G------T--A---------------CA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307867 22 - 135778131 GTTGT----CCTCCAGCG-T--GG--G------T--A---------------CA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2175  5 +     10270 -------------------T--GG--G------T--------------------
i Choloepus_didactylus.ChoDid_scaffold_147047            I 4 I 1
s Choloepus_hoffmanni.KN194906.1                            609652  5 -    839153 -------------------T--GG--G------T--------------------
i Choloepus_hoffmanni.KN194906.1                         I 4 I 1
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2404 22 -      4087 ATTAT----CTCCTAGAG-C--GG--G------T--A---------------TA
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412276 22 -   2368649 GCTGT----CCTCTAGTG-T--GA--G------T--A---------------CA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382158 22 - 200372422 GCTGT----CCTCTAGTG-T--GA--G------T--A---------------CA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5711 22 -     84244 GCTGT----CCTCTAGTG-T--GA--G------T--A---------------CA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810737 21 +  53390261 ATTT-----CCCATAGCA-T--GA--A------T--G---------------TA
i Condylura_cristata.JH655891.1                          C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6307 22 -      8242 ATTGT----CTCTTAGAA-T--GA--C------T--A---------------TA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47464 16 -     83289 ----------TACTAACA-T--GG--G------C--A---------------TA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213118978 16 - 224834208 ----------CACTAGCA-T--GG--G------T--A---------------TA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12552 22 +     12657 attgt----ttcctaccg-t--gg--c------t--a---------------aa
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 I 52
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7911 22 +     87169 ATTGT----CGCCTAGCA-T--GC--A------T--T---------------CA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650186 20 -   1526836 ATTGT----CTCCTAG---T--GA--G------T--G---------------GA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22818 22 +     50838 ATTGT----CCTCTATTG-T--GGATG------T--G-----------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12306 20 +     36344 ATTGT----CTCCAATCA-T--GG--G------T--A-----------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31746 20 +     75252 TTTGT----CTCCAATCA-T--GG--G------T--A-----------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2112841 22 -   2246927 ATCAT----CTCCTGGCA-C--GG--G------C--T---------------TG
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635296 22 -  35494412 ATTGT----CTCCTAGCT-T--GG--G------T--A---------------TA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11869019 19 -  20541912 ATCGT----CTCCTAGCG-T--GG--A------T--------------------
i Desmodus_rotundus.KZ672289.1                           C 0 I 5
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667831 20 -   1390856 ATTGT----CTCCTAGTA-C--GG--G------T--A-----------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142636 20 -    198055 ATTGT----CTCCTAGCA-C--GG--G------T--A-----------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955334  5 -  37912305 --------------------------G------T--C---------------TA
i Dipodomys_ordii.KN672350.1                             I 4 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                    946  5 +     14058 --------------------------G------T--C---------------TA
i Dipodomys_stephensi.DipSte_scaffold_77284              I 4 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 12879 20 +     14636 ATTGT----CTCCAATCA-T--GG--G------T--A-----------------
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62858515 22 - 111700974 ATTCT----CTCCCAGCA-G--GG--A------G--A---------------GA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9672 22 +     19438 ATTGT----CTCttaaca-t--ga--a------t--a---------------ta
i Eidolon_helvum.AWHC01266696.1                          C 0 I 35
s Elaphurus_davidianus.JRFZ01104969.1                       246023 22 -    607251 ACTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9113558 19 -  10337057 ATTAT-------CTAGCA-G--GA--C------T--A---------------TA
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35177 16 +    110024 ----------CACTAGCA-T--GG--G------T--A---------------TA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           17106 16 +     18970 ----------CACTAGCA-T--GT--G------T--A---------------TA
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925562 22 +  41312741 ATTAT----CTCCTAGCA-T--GG--T------T--A---------------TA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582788 22 +  14770903 ATTGT----CTCCTAACA-T--GA--A------T--A---------------TA
i Eptesicus_fuscus.JH977646.1                            C 0 I 2
s Equus_asinus.JREZ01000139.1                              3045297 22 -   4378816 ATTGT----CTCCTAGCA-G--GG--A------T--G---------------TA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379227 22 +  39960074 ATTGT----CTCCTAGCA-G--GG--A------T--A---------------TA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415209 22 -    498745 ATTGT----CTCCTAGCA-G--GG--A------T--A---------------TA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671507 22 +   7059049 ATTGT----TTCTGAGTA-T--GG--A------T--A---------------TA
i Erinaceus_europaeus.JH835339.1                         C 0 I 5
s Erythrocebus_patas.Contig38                               266009 22 +  21539334 GTTGT----CCTCCAGCG-T--GG--G------T--A---------------CA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74499 22 -    133382 ATTGT----CTCCTAGCT-T--GG--G------T--A---------------TA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2221 22 +     25849 ATTGT----CTCCTAGCT-T--GG--G------T--A---------------TA
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250526 22 - 206538554 ATTGT----CTCCTAGCA-T--GC--A------T--A---------------TA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120482 22 - 205367284 ATTGT----CTCCTAGCA-T--GC--A------T--A---------------TA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  1124 22 +     25330 ATTGT----CTCCTAGCA-T--GC--A------T--A---------------TA
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2926110 20 -   3816255 ATTGT----CTCCTATCA-T--GT--T------T--A-----------------
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                5095 22 -     28519 ATTGT----CTCCTAGCA-C--AG--G------T--A---------------AA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2281 22 +    660261 ACTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            5109 22 -      6791 ATCGT----CTTCCGGCA-T--GG--G------T--G---------------GA
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                785 22 -      2763 ATTGT----CTTTTAGTG-T--GG--G------T--A---------------CA
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                259205 22 - 186649187 ATTGT----CTTTTAGTG-T--GG--G------T--A---------------CA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    7025 22 -     78134 GTTGT----CTTCCGGCA-T--GG--G------T--G---------------GA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34284 22 -    327341 ATTGT----TGCCTAGCA-T--GC--A------T--C---------------CA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15948 22 +     48891 CCTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938549 20 -  22651954 ATTGT----CTCTTATCA-T--GG--G------T--A-----------------
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6266 22 +      8654 ATTAT----CACTTAGTG-C--GT--G------T--A---------------TG
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11334 22 -     36432 ATTGT----CCCCTAGCA-T--GG--G------T--A---------------TG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556379 22 -   1711038 ATTGT----CTCCTAGCA-T--GG--A------T--A---------------TG
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                102 22 -      8370 ATTGT----CTCCTAGCA-T--GG--A------T--A---------------TG
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145668 22 -    630532 ATTAT----GTTCTAGTG-T--GG--G------T--A---------------CG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73946 22 +     83186 ATTGT----TACCTAGCA-T--GC--A------T--C---------------CA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75483 20 +    143317 ATTGT----CTCCAATCA-T--GG--G------T--A-----------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               8715 22 +     12352 ATTAT----GTTCTAGTG-T--GG--G------T--A---------------CG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15902 22 +     55766 ATTAT----GTTCTAGTG-T--GG--G------T--A---------------CG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055430 22 + 191637585 ATTAT----GTTCTAGTG-T--GG--G------T--A---------------CG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804308 22 +  11177569 ATTAT----GTTCTAGTG-T--GG--G------T--A---------------CG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11348 22 -    135385 ATTGT----CTCCTATCA-T--GG--G------G--A---------------TA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390597 22 +   7955117 ATTGT----CTCCTGGCA-T--GG--G------T--G---------------TG
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13400 22 -     16823 ATTGT----CTGCTAGCT-T--GG--G------T--A---------------TA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1243095 16 +   9596543 ----------CACATATA-T--GG--G------A--A---------------TA
i Jaculus_jaculus.JH725527.1                             I 11 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75238 22 -     97402 ATTGT----CTCCTAGCT-T--GG--G------T--A---------------TA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45524 22 +    110728 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1475 22 -     25587 ATTAT----CTCCTAACG-T--GA--A------T--A---------------TA
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 I 2
s Leontocebus_fuscicollis.k141_3470480                         969 22 -     23187 GCCGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1283 22 -     14280 GCCGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         923 22 +      3713 GCCGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1109 22 +      8855 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5910 22 -     13645 GTTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816831 22 -   3914936 attat----tttctagcA-T--GG--G------T--A---------------TA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     22029 18 +     24238 ATTGT----TTTCT-----T--GT--G------T--G---------------GA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344582 22 +    662738 ATTGT----CTCCTAGCT-T--GG--G------T--A---------------TA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336939 22 -   1826925 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39087999 22 +  43346337 ATTGT----CTCCTAGTG-T--GG--G------T--A---------------TA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618237 22 +  59628241 ATTAT----CCTCTAGCT-T--GG--G------T--A---------------TA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48336 22 -     61512 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 375998 22 -  60120075 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28266 22 +     30207 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3104 22 -      5035 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28219 22 +     30527 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39395 22 -     50087 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49140 22 +     51645 TTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418342 22 - 187317192 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402573 22 +  25927173 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51744 22 -     62418 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4275 22 +     14901 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48217 22 +     59329 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274124 22 +    668171 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2756 22 -      5049 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5923 22 +     17132 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226602 22 -    270270 ATTGT----CTCTTAACA-T--GA--A------T--A---------------TA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 75
s Mandrillus_leucophaeus.scaffold280                        325406 22 +  24302211 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360237 22 -    752769 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676871 22 -    737560 ATTGT----CTCCTAGTA-T--AA--G------T--A---------------TA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             224167 22 +    317179 ATTGT----CTCCTAGTT-T--AA--G------T--A---------------TA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504797 22 +  40650429 ATTGT----CTCCTGGTG-T--GG--G------T--G---------------TG
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       153996 21 +    207569 AGTAT----GTCCTAGCG-TTTAA--C------T--------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_19308             29575 21 -     74585 AT-AT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53165 16 -    140813 ----------CACTAGCT-T--GG--A------T--A---------------TA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90866 22 +     93471 ATTGT----CTCCTAGCT-T--GG--G------T--A---------------TA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12519 22 +     17804 GCTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                246 22 +      5551 GCTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21330 22 -     26561 GCTGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49696 22 +    145209 ATTCT----CTCCCAGCT-G--GG--G------T--A---------------GA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188598 19 +    200668 ATTGT----CTCCTAGCA-T--GG--C------T--------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 5
s Microtus_ochrogaster.CM001695.1                         15966592 16 +  27267610 ----------CACTAGCT-T--GG--G------T--A---------------TA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368414 24 -   8254450 ATTGT----CTCCTAGTA-t--gg--a------ttta---------------ta
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_23309             46145 24 -     48117 ATTGT----CTCCTAGTA-T--GG--A------TTTA---------------TA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 2
s Miopithecus_ogouensis.k141_1534655                         25505 22 -     27822 GTTGT----CCTCTCGTG-T--GG--G------T--A---------------CA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12064 22 +     27589 ATTAT----TTTCTAGCA-T--GG--G------T--A---------------TA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362974 22 +    437263 ATTGT----CTCCTAGCT-T--GG--G------T--A---------------TA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183014 47 +    366855 ATTGTCTGTCTTCTAGCA-T--GG--ATATATAT--ATATAATCTCTCTCTCTA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 4
s Moschus_moschiferus.MosMos_scaffold_13123                  32179 22 -     82753 ACTGT----CTCCTAGCA-T--GC--G------T--A---------------TA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   22034 22 -     63510 ATTGT----TGCCTAGCA-T--GC--A------T--C---------------CA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45404 22 +     47283 ATTGT----CTCCTAACA-T--GA--A------A--A---------------TA
i Murina_feae.MurFea_scaffold_17764                      C 0 I 2
s Mus_caroli.LT608237.1                                   35597787 16 + 120012414 ----------CACCAGTA-T--GG--A------T--A---------------TA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41691327 16 + 129401213 ----------CACCAGCA-T--GG--A------T--A---------------TA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58219289 16 +  89631738 ----------CACCAGCA-T--AG--A------T--A---------------TA
i Mus_pahari.LT608297.1                                  C 0 I 2
s Mus_spretus.CM004101.1                                  39500246 16 + 130317789 ----------CACCAGCA-T--GA--A------T--A---------------TA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3121 22 -    124358 ATTTT----CTTTGGGTA-T--GG--G------T--G---------------GA
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358450 22 +  14710649 ATTAT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1203 22 -     27262 ATTCG----CTTTTATTG-T--GGTTG------T--C-----------------
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797409 22 +  10118263 ATTGT----CTCCTAACA-T--GA--A------T--A---------------TA
i Myotis_brandtii.KE162005.1                             C 0 I 2
s Myotis_davidii.KB100139.1                                4391583 22 +   6019432 ATTGT----CTCCTAACA-T--GA--A------T--A---------------TA
i Myotis_davidii.KB100139.1                              C 0 I 2
s Myotis_lucifugus.GL429869.1                               387622 22 +   4330536 ATTGT----CTCCTAACA-T--GA--A------T--A---------------TA
i Myotis_lucifugus.GL429869.1                            C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_66571                         6409 22 +     18357 ATTGT----CTCCTAACA-T--GA--A------T--A---------------TA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 2
s Nannospalax_galili.KL204047.1                             950184 15 +   3037898 ----------CAGCAGCG-T--GG--G------T--G---------------T-
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              32290 22 +     34575 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469511 22 -  31847680 attat----tttctagcA-T--GG--G------T--A---------------TA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235632 22 -   7148211 ATTGT----CTCCTAGCT-T--GG--G------T--A---------------TA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131319 22 -    149072 ATTGT----CTTTTAGTG-T--GG--A------T--C---------------TA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 4
s Nomascus_annamensis.k141_1771965                           56603 22 -    132029 ATTAT----GTTCTAGTG-T--GG--G------T--A---------------CT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12698 22 -     16345 ATTAT----GTTCTAGTG-T--GG--G------T--T---------------CG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18587 22 +     22201 ATTAT----GTTCTAGTG-T--GG--G------T--A---------------CT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416817 22 -  22158432 ATTAT----GTTCTAGTG-T--GG--G------T--A---------------CT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  28992 22 -     54323 ATTAT----GTTCTAGTG-T--GG--G------T--A---------------CT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201941 22 +   9404916 ATTAT----CCTCTAGCT-T--GG--G------T--A---------------TA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059477 22 -  11899542 ATTGT----CCTCTACTG-T--GGATG------T--G-----------------
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1455280 22 +   2017862 ATTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442575 22 -    630418 ACTGT----CTTCTAGCA-T--GG--G------T--A---------------TA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22232 22 +    150152 ACTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97207 16 -    140218 ----------CACTTGCA-T--GG--G------T--A---------------TA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7749 16 -     41509 ----------CACTCTCA-T--GG--G------T--G---------------TA
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8106045 22 +  10937097 ATTGT----Ctcctattt-t--tt--t------t--a---------------ta
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3035 22 +     11607 ATTAC----CTTCTAACA-T--GG--G------T--A---------------TA
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108690 18 - 174332312 ATTGT----TTTCT-----T--GT--G------T--G---------------GA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42891 22 +    559221 ATTAT----CCTCTAACT-T--GG--G------T--A---------------TA
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26410974 22 -  44047080 CCTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11597 22 +     17875 CCTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02004363.1                                  603 22 +      1263 ATTGT----CTTTTAGTG-T--GG--G------T--A---------------CA
i Pan_paniscus.AJFE02004363.1                            I 19 I 27
s Pan_troglodytes.KZ622849.1                                 37959 22 -    110857 ATTGT----CTTTTAGTG-T--GG--G------T--A---------------CA
i Pan_troglodytes.KZ622849.1                             I 375 I 27
s Panthera_onca.PanOnc_flattened_line_3271                   28532 22 -    230217 ATTGT----CTCCTAGCA-T--GC--A------T--A---------------TA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465764 22 -  18783137 ATTGT----CTCCTAGCA-T--GC--A------T--A---------------TA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976365 22 +   8748460 ATTGT----CTCCTAGCA-T--GC--A------T--A---------------TA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622492 22 +   2937107 CCTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246421 22 - 183742232 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12706 22 +     21308 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295449 22 -  20919399 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25348 22 -     27687 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2025 22 +     10553 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  1986 22 -     10386 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18701 22 +     78924 ACTGT----CACCTAGCT-T--GC--A------T--A---------------CA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7544  5 +      9367 --------------------------G------T--C---------------TA
i Perognathus_longimembris.PerPac_flattened_line_89005   I 5 C 0
s Peromyscus_maniculatus.KI615324.1                         250968 16 +  18517816 ----------CTCTCACA-T--GG--G------T--A---------------TA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35539 16 -     56120 ----T----CTCCTACTA-T--GG--G------T--G-----------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7566 22 -     63832 ATTGT----CTCCTAGCT-T--GG--G------T--A---------------TA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5671 22 +     55023 GTTGT----CCTCTAGTG-T--GA--G------T--A---------------CA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5194 22 -     89929 GTTGT----CCTCTAGTG-T--GA--G------T--A---------------CA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5782 22 +     40849 GTTGT----CCTCTAGTG-T--GA--G------T--A---------------CA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257511 22 +  14605196 GTTGT----CCTCTAGTG-T--GA--G------T--A---------------CA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7899 22 +     22231 ATTGT----CTCCTAACA-A--GA--A------T--A---------------TA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 2
s Pithecia_albicans.k141_1239476                             67036 22 +    207309 GTTGT----CTTCTAGTA-T--GG--G------C--A---------------CA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8131 22 -     25401 GTTGT----CTTCTAGTA-T--GG--G------C--A---------------CA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33877 22 +     58159 GTTGT----CTTCTAGTA-T--GG--G------C--A---------------CA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34153 22 +     63561 GTTGT----CTTCTAGTA-T--GG--G------C--A---------------CA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33908 22 +     51148 GTTGT----CTTCTAGTA-T--GG--G------C--A---------------CA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558884 22 -   4542175 GTTGT----CTTCTAGTA-T--GG--G------C--A---------------CA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33892 22 +     51125 GTTGT----CTTCTAGTA-T--GG--G------C--A---------------CA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4587 22 +     19503 ATTGT----CTCCTAGCT-T--GG--G------T--A---------------TA
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10324 22 +     39866 GTTGT----CTTCTCGTG-T--GG--G------T--A---------------CA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5406 22 -      9282 GTTGT----CTTCTCGTG-T--GG--G------C--A---------------CA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44810 22 -     87950 GTTGT----CTTCTCGTG-T--GG--G------C--A---------------CA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45204 22 -     88961 GTTGT----CTTCTCGTG-T--GG--G------T--A---------------CA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9902 22 -     39403 GTTGT----CTTCTCGTG-T--GG--G------T--A---------------CA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44854 22 +     87928 GTTGT----CTTCTCGTG-T--GG--G------T--A---------------CA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9901 22 -     60166 GTTGT----CTTCTCGTG-T--GG--G------T--A---------------CA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16822 22 -     67232 GTTGT----CTTCTCGTG-T--GG--G------T--A---------------CA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44754 22 -     90634 GTTGT----CTTCTCGTG-T--GG--G------T--A---------------CA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46221 22 +     89403 GTTGT----CTTCTCGTG-T--GG--G------T--A---------------CA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182372 22 - 189387572 aTTGT----CTTCTAATG-T--GG--G------T--A---------------CA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197114 22 -   9816681 ATTGT----CTTCTAATG-T--GG--G------C--A---------------CA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30869 22 +     69807 GTTGT----CCTCTGGTG-T--GG--G------T--A---------------CA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48052 22 -     80239 GTTGT----CCTCTGGTG-T--GG--G------T--A---------------CA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2798 22 -     12774 gttat----cacttagtg-c--ag--g------t--a---------------tg
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Psammomys_obesus.NESX01036366.1                            40699 16 +     52041 ----------CACTAGCT-T--GG--A------T--A---------------TA
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55673 27 -     66298 ATTGT----CTCCTAGCA-t--gg--a-gattat--a---------------ta
i Pteronotus_parnellii.KE847780.1                        C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8059 22 -     18639 ATTAT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844218 22 -  28871421 ATCGT----CTCTTAACa-t--ga--a------t--a---------------ta
i Pteropus_alecto.KB030862.1                             C 0 I 39
s Pteropus_vampyrus.KN525825.1                             3540734 22 -   4952924 ATCGT----CTCCTAACa-t--ga--a------t--a---------------ta
i Pteropus_vampyrus.KN525825.1                           C 0 I 39
s Puma_concolor.QAVW01001104.1                            18102750 22 +  38429054 ATTGT----CTCCTAGCA-T--GC--A------T--A---------------TA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             30238 22 +     91421 GTTGT----CCTCTAGTG-T--GG--G------C--A---------------CA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156789 22 -   7812017 GTTGT----CCTCTAGTG-T--GG--G------C--A---------------CA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11089 22 +     72585 GTTGT----CCTCTAGTG-T--GG--G------C--A---------------CA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5093 22 -     55207 ACTGT----CTTCTAGCA-T--GG--G------T--A---------------TA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37025906 16 -  90668790 ----------CACCAGCA-T--GG--A------T--A---------------TG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918151 22 +   3329780 ATTGT----CTCCTAGCA-T--AG--T------T--A---------------TA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4695 22 +      7119 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125365 22 + 195417433 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239537 22 -   7961872 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 78958 22 -    116970 ATTGT----CTCTTAACA-T--GA--A------T--A---------------TA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 45
s Saguinus_bicolor.k141_161125                                9596 22 +     12412 GCCGT----CTTCTCGTG-T--GG--G------C--A---------------CA
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               918 22 +      9876 GTCAT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16514 22 -     24931 GCCGT----CTTCTCGTG-T--GG--G------C--A---------------CA
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1393 22 +      4564 GCCGT----CTTCTCGTG-T--GG--G------C--A---------------CA
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4198 22 -      7443 GCCGT----CTTCTCGTG-T--GG--G------C--A---------------CA
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395231 22 - 209938924 GCCGT----CTTCTCGTG-T--GG--G------C--A---------------CA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1815 22 +     10149 GCCGT----CTTCTCGTG-T--GG--G------C--A---------------CA
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1159 22 +     10417 GTCGT----CTTCTAGTG-T--GG--G------C--A---------------CA
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14544 22 +     16473 ACTGT----CTTCTAGCA-T--GG--G------T--G---------------TA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111284 21 + 121099817 GTTGT----CTT-TAGTG-C--GG--G------C--A---------------CG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32853 21 -     47369 GTTGT----CTT-TAGTG-C--GG--G------C--A---------------CG
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33236 21 -     79414 GTTGT----CTT-TAGTG-C--GG--G------C--A---------------TG
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29927 21 -     34454 GTTGT----CTT-TAGTG-C--GG--G------C--A---------------CG
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17329 21 -     22428 GTTGT----CTT-TAGTG-C--GG--G------C--A---------------CG
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32483 21 -     47109 GTTGT----CTT-TAGTG-C--GG--G------C--A---------------CG
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240506 22 +   5703754 GTTGT----CTTGTAGTG-T--GG--G------C--A---------------CA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10097 22 +     21866 GTTGT----CTTGTAGTG-T--GG--G------C--A---------------CA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122573 22 +    313613 ATTGC----CCCATAGCA-T--GC--A------T--G---------------TG
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 2
s Semnopithecus_entellus.k141_583282                          1676 22 +     11297 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32069 22 +     58920 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18567 22 -     45317 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26225 22 -     42441 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28901 22 -     29113 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          31989 22 -     48123 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52751 16 +     77746 ----------CACGAGCA-T--AG--A------T--A---------------TA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867319 20 -   1910179 --TGT----CTCCTCACA-T--GG--A------T--A---------------TC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 44
s Sorex_araneus.JH798187.1                                 4674566 22 +  18376816 ATTGT----CTCAtagaa-t--gt--a------t--a---------------ta
i Sorex_araneus.JH798187.1                               C 0 I 9
s Spermophilus_dauricus.KZ294078.1                         1872160 22 +   3870691 ATTGT----CTCCTGGCG-T--GG--G------T--G---------------TG
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16284 22 -     97271 ATTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128910 22 +    196729 ATTGT----TGCCTAGCA-T--GC--C------T--C---------------CA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6648185 22 +  69701581 ATTGT----CTCCTGGCA-T--GG--G------T--A---------------TA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       394074 22 +   1523678 ATTAT----GTTCTAGTG-T--GG--G------T--A---------------CG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17617 22 +     22964 ATTGT----CTCCTAGCA-T--GA--A------T--A---------------TA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 2
s Tapirus_indicus.TapInd_scaffold_7432                      195018 22 +    199430 ATTGT----CTCCTGGCA-T--GG--G------T--A---------------GA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    108998 22 -    539355 ATTGC----CTCCTGGCG-T--GG--G------T--A---------------GA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4627 22 +      9917 ACTAT----CTCCTAGTG-T--GG--G------T--A---------------TC
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11423 22 +     20590 ACTAT----CTCCTAGTG-T--GG--G------T--A---------------TC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356232 22 - 186847797 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27850 22 -     33621 ATTGT----CTCCCATCA-T--GG--G-A---GT--G-----------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22591 21 -     31044 ACTAT----CTCCCAG-A-T--GG--G------T--A---------------CA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483928 19 -    610378 ATTGT----CTCCCAGTA-T--GG--A------T--------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 5
s Trachypithecus_auratus.k141_1189070                        23978 22 +     26378 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36776 22 -     78344 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23303 22 +     25722 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31732 22 -     62838 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31723 22 +     46913 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12461 22 -     28527 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33663 22 -     64340 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31701 22 -     63452 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13152 22 +     22490 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1118 22 +      9911 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          913 22 -     33539 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258672 22 -   6242583 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4691 22 +     19340 GTTGT----CCTCTAGTG-T--GG--G------T--A---------------CA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177803 22 -    200418 ATTAT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485602 22 -  10818551 ATTAT----CTCCTGGTG-T--GA--G------G--A---------------TG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839580 24 -   4065304 ACTGT----CTCCGAGTG-T--GA--A------TATA---------------CA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13658 24 -     70247 ACTGT----CTCCGAGTG-T--GT--A------TATA---------------CC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369169 22 -  33153633 ATTGT----CTCCTAGTT-T--GG--G------T--A---------------TA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7360 16 -     21056 ATCGC----TCCATAGCA-T--G-------------------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 6
s Ursus_maritimus.KK499267.1                                185484 22 +   5085361 ATTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   80302 22 +   5488506 ATTGT----CTCATAGCA-T--AG--G------T--A---------------TA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108835 22 -    112863 ATTAT----CCTCTAGCT-T--GG--G------T--A---------------TA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        178032 22 -    224448 ATTGT----CTCCTGGTG-T--GG--G------T--G---------------TG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32486 22 -     86975 ATTGT----CTCCTAGCA-T--GG--G------T--A---------------TA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       4543 16 -     63895 ----------AATTAGTG-T--GG--C------T--A---------------TT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 11 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1131 22 +      3447 ATTGT----CTCCTAGCT-T--GG--G------T--A---------------TA
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Castor_canadensis.CasCan_scaffold_39952                    31579  0 -     39886 C

a score=0.000000
s hg38.chrUn_KI270755v1                                      10054 27 +     36723 T------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
s Acinonyx_jubatus.LLWD01001279.1                           816546 27 +   1699592 T------A--T------A-GC--ATGACATGACT----TCTCAT-TGGC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     28786 27 +     63021 T------G--T------A-GT--GTAGCATGGTT----TTGTAA-TAGG
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419052 27 +  29979442 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            219050 27 +    347723 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    21562 27 -     61208 T------G--A------A-AC--ATAGTATAACC----TGTGGA-CATT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   51000 27 +     53615 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3028 27 +     13857 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19584 27 -     21945 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21269 27 +     32033 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74524 27 -     84148 T------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46778 27 -     78289 C------A--G------A-GC--TTGGCACGGCT----TGCTGC-CAGC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46194 27 +     55831 T------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44656 27 -     64179 T------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1759 27 -      3959 T------G--G------A-GC--TTGGCATGGCT----TGTTGC-CAGC
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43281 27 +     45454 T------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48930 27 +     70886 T------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11100 27 +     30854 T------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35236 27 +     42133 T------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592255 27 +   2318259 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGT
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180663 27 -    412891 T------A--C------A-GC--ATGACGTGGCG----TGTTGC-CAGT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 5 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53411 27 -     68529 T------G--T------A-GC--ATGGCATGGCT----TTTTGC-CAGC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3441 27 +     17741 T------A--G------A-GC--TTGGCACAGCT----TGCTGC-CAGT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4066 27 -     15923 T------A--G------A-GC--TTGGCACGGCT----TGCTGC-CAGT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674348 27 +   5030052 T------A--G------A-GC--TTGGCACGGCT----TGCTGC-CAGT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4342 27 -     16391 T------A--G------A-GC--TTGGCACAGCT----TGCTGC-CAGT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3901 27 -     17186 T------A--G------A-GC--TTGGCACAGCT----TGCTGC-CAGT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27512 27 -     32367 A------G--C------A-CC--AGGGCATGGCT----TGCTGT-CAGT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9177 27 -     15198 G------A--C------A-GT--GTGACATGGCG----TGTTGC-CAGT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 5 C 0
s Ateles_geoffroyi_b.tarseq_1536                               276999 27 +  21539123 T------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13164 27 +     48076 C------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8300 27 -     28759 T------A--G------A-GC--TTGGCACAGCT----TGTTGC-CAGC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35856 27 +     44353 T------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51226 27 -     71267 T------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25284 27 -     33135 T------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966906 27 -  23207421 C------A--T------G-GC--ATGACATGGCT----TGTTGC-CAGC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3407 27 -     25979 C------A--T------G-GC--ATGACATGGCT----TGTTGC-CAGC
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93243 26 +    124022 -------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36431 27 +    288883 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGT
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423584 27 -  48749331 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGT
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      769185 27 +   1948126 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGT
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559730 27 -  45695690 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGT
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536411 27 -   4408762 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                  10078 27 +     28062 G------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45369 27 -     91139 G------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22896 27 +     95584 G------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22809 27 +    119600 G------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12432 27 +     18648 T------A--G------A-GC--GTGGCACGGCT----TGTTGC-CAGC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11939 27 -     13885 C------A--G------A-GC--GTGGCACGGCT----TGTGGC-CAGC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            4146 27 -      8861 T------A--G------A-GC--ATGGCACGGCT----TGTTGC-CAGC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456488 27 + 189096842 T------A--G------A-GC--GTGGCACGGCT----TGTTGC-CAGC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               4062 27 +      8664 T------A--G------A-GC--GTGGCACGGCT----TGTTGC-CAGC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7634950 27 +  17673402 T------G--T------A-GC--ATGACATGGCT----TGTCGC-TGGC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4669251 27 +   7040546 T------G--T------A-GC--ATGACATGGCT----TGTCGC-TGGC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1212949 27 +   1652518 T------G--T------A-GC--ATGACATGGCT----TGTCGC-TGGC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42508991 27 +  60362399 T------T--A------A-GC--ATGACATGGCT----TATTGC-TAGC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12626 27 -     23171 T------T--A------A-GC--ATGACATGGCT----TATTGC-TAGC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225967 27 +   9314153 T------T--A------A-GC--ATGACATGGCT----TATTGC-TAGC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41619104 27 +  59632846 T------T--A------A-GC--ATGACATGGCT----TATTGC-TAGC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110685 27 -  63665305 T------T--A------A-GC--ATGACATGGCT----TATTGC-TAGC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416259 27 -  46296322 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGT
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598256 27 +  44709034 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGT
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2167 27 -     20114 T------A--T------A-GT--ATGGTATGGCT----TGTTGC-CAGC
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274458 27 +    496798 T------C--T------A-GC--ATGGCATGGCT----CATTGC-CAAC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               4050 27 +      9923 C------A--C------A-GC--ATGACATGGCG----TGTTGC-CAGT
i Carollia_perspicillata.CarPer_scaffold_107871          I 5 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83259 27 -    217609 A------A--T------A-CC--ATGACATGGCT----TGTTGC-CAGC
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 C 0
s Cavia_aperea.AVPZ01000300.1                              5000135 29 +  23392119 T------ATAT------A-GC--ATGGCAAGGCT----ATTTCC-CAGG
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5003576 29 +  23407841 T------ATAT------A-GC--ATGGCAAGGCT----ATTTCC-CAGG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          461 29 -    143979 T------ATAT------A-GC--ATGGCAAGGCT----ATTTCC-CAGG
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_niveiventris.k141_592277                           7403 27 -     12580 T------A--G------A-GC--ATGGCACGGCT----TGTTGC-CAGC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45512 27 +     53515 T------A--G------A-GC--ATGGCACGGCT----TGTTGC-CAGC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376138 27 -  26074798 C------A--G------A-GC--TTGGCGCGACT----TGCTGC-CAGC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10208 26 -     34880 C------A--G------A-G---TTGGCGCGGCT----TGCTGC-CAGC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69305 27 -     89041 C------A--G------A-GC--TTGGCGCGGCT----TGCTGC-CAGC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2121 27 -     76265 T------C--T------A-GC--ATGGCATGGCT----CATTGC-CAAC
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495580 27 -  27778364 T------A--T------A-AC--AGGACATGGCT----TGTTGC-CAGC
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22413 27 +     27315 T------A--T------A-AC--AGGACATGGCT----TGTTGC-CAGC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                144084 27 -   4669795 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                           58 27 +      3297 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3256 27 -     14410 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47638 27 -    148725 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29915 27 -     40656 C------A--G------A-GC--GTGGCACGACT----TGTTGC-CAGC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9874 27 +     20796 C------A--G------A-GC--GTGGCACGACT----TGTTGC-CCGC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            14988 27 -     17524 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30721 27 -     34525 C------A--G------A-GC--GTGGCACGACT----TGCTAC-CAGC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14499 27 -     25376 C------A--G------A-GC--GTGGCACGACT----TGTTAC-CAGC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367088 27 -  39242232 C------A--G------A-GC--GTGGCACGACT----TGTTGC-CAGC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272813 27 +  21565898 C------A--G------A-GC--GTGGCACAGCT----TGTTAC-CAGC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35180 27 -     45857 C------A--C------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30081 27 -     32606 C------A--G------A-GC--GTGGCACGACT----TGTTGC-CCGC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6236 27 +      8499 C------A--G------A-GC--GTGGCACGACT----TGTTGC-CAGC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28641 27 +     70610 C------A--G------A-GC--GTGGCACGGCT----TGTTAC-CAGC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25603 27 +     36323 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15505 27 -     19938 T------A--C------A-GC--GTGACACGGCC----TGTTTC-CAGC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            11174 27 -     32913 C------A--G------A-GC--CTGGCTCGGCG----TGCTGC-CAGC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21587 27 -     40346 C------A--G------A-GC--CTGGCTCGGCG----TGCTGC-CAGC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21841 27 +    216457 C------A--G------A-GC--CTGGCTCGGCG----TGCTGC-CAGC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21631 27 +     39636 C------A--G------A-GC--CTGGCTCGGCG----TGCTGC-CAGC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33721 27 -     52013 T------G--G------A-GC--GTGGCACGGCT----TGCTGC-CAGC
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44709 27 -    112038 G------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10259 27 +     34062 G------A--G------A-GC--TTGGCACGGCT----TGTTGC-CAGC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346503 27 +  18827391 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13042 27 -     44032 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307889 27 - 135778131 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2181 27 +     10270 T------A--T------A-GC--ACAATATGGCT----CATTCC-CAGC
i Choloepus_didactylus.ChoDid_scaffold_147047            I 1 C 0
s Choloepus_hoffmanni.KN194906.1                            609658 27 -    839153 T------A--T------A-GC--ATGATATGGCT----CATTCC-CAGC
i Choloepus_hoffmanni.KN194906.1                         I 1 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2426 28 -      4087 T------A--T-----GA-GC--ATGACATGGCT----TGTTGC-CAGT
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412298 27 -   2368649 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382180 27 - 200372422 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5733 27 -     84244 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810760 27 +  53390261 C------A--T------A-AC--ATGCCATGTTT----TGTTGC-CAGT
i Condylura_cristata.JH655891.1                          I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6329 27 -      8242 T------A--T------A-GC--GTGACATAACT----TTTTGC-CAGC
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47480 27 -     83289 T------A--T------A-GT--GTAGCATGGTT----TGCTAA-TAGG
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213118994 27 - 224834208 T------G--T------A-GT--ATAGCATGATT----TACTA-ATAGG
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12626 22 +     12657 --------------------c--atggcatggct----ttatgc-CAGT
i Crocidura_indochinensis.CroInd_scaffold_77846          I 52 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7933 27 +     87169 T------A--C------A-GC--ATGACATGGCT----TCTCGT-TGGC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650206 37 -   1526836 T------A--TATACACA-GC--ATGACACAGCTTGTTCGTTAC-CAGC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22840 27 +     50838 T------A--T------A-GT--ATGGTATGGCT----TTTTGC-CAGC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12326 29 +     36344 T------ACAT------A-GC--ATGGCATGGCT----GTTTCT-CAGC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31766 29 +     75252 T------ATAT------A-GC--ATGGCGTGGCT----GTTTCC-CAAC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2112863 27 -   2246927 T------A--G------A-GC--ATGGCCTGACC----TGGGTC-CAGC
i Dasypus_novemcinctus.JH564415.1                        C 0 I 381
s Delphinapterus_leucas.KZ290073.1                        18635318 27 -  35494412 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11869043 27 -  20541912 G------A--C------A-GC--ATGGCCTGGCT----CATTGC-CAGT
i Desmodus_rotundus.KZ672289.1                           I 5 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667851 27 -   1390856 T------A--T------A-AC--AGGACATGGCT----TGTTGC-CAGC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142656 27 -    198055 T------A--T------A-AC--AGGACATGGCT----TGTTGC-CAGC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955339 27 -  37912305 C------A--T------A-GC--ATGGCATGGCT----TATTGC-CAGG
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                    951 27 +     14058 C------A--T------A-GC--ATGGCATGGGT----TATTGC-CAGG
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 12899 29 +     14636 T------ATAT------A-GC--ATGGCATGGCT----GTTTCC-CAGG
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62858537 28 - 111700974 T------G--C-----GA-GC--ATGACTTGGCT----TGTTGC-TAGC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9729 24 +     19438 -----------------a-gc--aTGACATGGCT----TTTTGC-CAGC
i Eidolon_helvum.AWHC01266696.1                          I 35 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       246045 27 -    607251 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9113577 27 -  10337057 A------A--A------A-GC--ATGGCATGGCT----TAATGC-TGGC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35193 27 +    110024 T------G--A------A-GA--GAAGCACCATT----TACTGG-GAGG
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           17122 27 +     18970 T------G--A------A-GA--GAAGCACCATT----TGCTGG-GAGG
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925584 27 +  41312741 C------A--T------A-GC--ATGACATGGCT----TATTGC-CAGC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582812 27 +  14770903 T------A--T------A-GC--CTGGCATGGCT----TGTTGC-CAGT
i Eptesicus_fuscus.JH977646.1                            I 2 C 0
s Equus_asinus.JREZ01000139.1                              3045319 27 -   4378816 T------A--T------A-GC--AGGACATGGCT----GGTTGC-CAGC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379249 27 +  39960074 T------A--T------A-GC--AGGACATGGCT----GGTTGC-CAGC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415231 27 -    498745 T------A--T------A-GC--AGGACATGGCT----GGTTGC-CAGC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671534 22 +   7059049 --------------------T--TTGATATGGCT----TGTTTC-CAAT
i Erinaceus_europaeus.JH835339.1                         I 5 C 0
s Erythrocebus_patas.Contig38                               266031 27 +  21539334 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74521 27 -    133382 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2243 27 +     25849 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250548 27 - 206538554 T------A--T------A-GC--ATGACATGACT----TCTCGT-TGGC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120504 27 - 205367284 T------A--T------A-GC--ATGACATGACT----TCTCGT-TGGC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  1146 27 +     25330 T------A--T------A-GC--ATGACATGACT----TCTCGT-TGGC
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2926130 27 -   3816255 T------A--T------G-AT--ACGGCATGGCT----TTTTGC-CAGC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                5117 27 -     28519 G------A--T------A-GC--ATGGCATGGCG----TGTTGC-CAGC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2303 27 +    660261 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGC
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            5131 27 -      6791 T------G--T------C-AC--ATGGTATGGCT----CGTGTC-CAGT
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                807 27 -      2763 T------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                259227 27 - 186649187 T------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    7047 27 -     78134 T------G--T------T-GC--ACAGTATGGCT----CATGTC-CAGT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34306 27 -    327341 T------A--C------A-GC--GTGACATGGCT----TCTCGT-TGGC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15970 27 +     48891 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938569 25 -  22651954 T------A--T------G-AT--ATGGCACAGCT----TTTTGC-TA--
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6288 27 +      8654 T------G--C------A-GC--ATGACATGGCT----TGCTGC-CACC
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11356 27 -     36432 T------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556401 27 -   1711038 T------A--T------A-GC--ATGTCATGGNN----NNNNNN-NNNN
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                124 27 -      8370 T------A--T------A-GT--ATGACATGGCT----TTTTGC-CAGC
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145690 27 -    630532 T------A--G------A-GC--ACAGCACGACT----TGTTGC-CAGC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73968 27 +     83186 T------A--C------G-GC--CTGACATGGCT----TCTCGT-TGGC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75503 29 +    143317 T------ATAT------A-CC--ATGGCATGGCT----ATTTCC-CAGG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               8737 27 +     12352 T------A--G------A-GC--ACAGCACGACT----TGTTGC-CAGC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15924 27 +     55766 T------A--G------A-GC--ACAGCACGACT----TGTTGC-CAGC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055452 27 + 191637585 T------A--G------A-GC--ACAGCACGACT----TGTTGC-CAGC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804330 27 +  11177569 T------A--G------A-GC--ACAGCACGACT----TGTTGC-CAGC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11370 27 -    135385 T------A--T------A-AC--ATGGCATGGCT----TTTTGC-CAGC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390619 27 +   7955117 A------G--T------G-GC--AGGGCATGGTT----TATTGT-AAAA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13422 27 -     16823 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1243111 25 +   9596543 T------G--G------A-AC----AGTATGGCT----TGTGGA-CAGT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75260 27 -     97402 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAAC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45546 27 +    110728 T------A--G------A-GC--TTGGCACGGCT----TCTTGC-CAGC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1499 27 -     25587 T------A--C------A-GC--CTGGTATGGCT----TGCTGC-CAGT
i Lasiurus_borealis.LasBor_scaffold_61236                I 2 C 0
s Leontocebus_fuscicollis.k141_3470480                         991 27 -     23187 T------A--G------A-GC--GTGGCACGGCT----TGCTGC-CAGC
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1305 27 -     14280 T------A--G------A-GC--GTGGCACAGCT----TGCTGC-CAGC
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         945 27 +      3713 T------A--G------A-GC--GTGGCACGGCT----TGCTGC-CAGC
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1131 27 +      8855 T------A--G------A-GC--TTGGCATGGCT----TGTTGC-CAGC
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5932 27 -     13645 T------A--G------A-GC--TTGGCATGGCT----TGTTGC-CAGC
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816853 27 -   3914936 C------C--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     22047 24 +     24238 T------A--T------A--T--ACAGTGTG--G----TATCAT-CAGC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344604 27 +    662738 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336961 27 -   1826925 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39088021 27 +  43346337 T------A--T------A-GC--ATGAAGTGGCT----TGTTGC-CACC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618259 27 +  59628241 T------T--A------A-GC--ATGACATGGCT----TATTGC-CAGC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48358 27 -     61512 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 376020 27 -  60120075 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28288 27 +     30207 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3126 27 -      5035 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28241 27 +     30527 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39417 27 -     50087 C------A--G------A-GC--ATGGCATGACT----TGTTGC-CAGC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49162 27 +     51645 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418364 27 - 187317192 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402595 27 +  25927173 C------A--G------A-GC--ATGGCATGACT----TGTTGC-CAGC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51766 27 -     62418 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4297 27 +     14901 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48239 27 +     59329 C------A--G------A-GC--ATGGCATGACT----TGTTGC-CAGC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274146 27 +    668171 C------A--G------A-GC--ATGGCATGACT----TGTTGC-CAGT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2778 27 -      5049 C------A--G------A-GC--ATGGCATGACT----TGTTGC-CAGC
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5945 27 +     17132 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226699 27 -    270270 T------G--T------A-GC--ATGGCATGGCT----TTTTGC-CAGC
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 75 C 0
s Mandrillus_leucophaeus.scaffold280                        325428 27 +  24302211 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360259 27 -    752769 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676893 14 -    737560 T------A--T------A-AC--ATGACATG------------------
i Manis_javanica.JSZB01003497.1                          C 0 I 1
s Manis_pentadactyla.KN006162.1                             224189 14 +    317179 T------A--T------A-GC--ATGACATG------------------
i Manis_pentadactyla.KN006162.1                          C 0 I 1
s Marmota_marmota.CZRN01000018.1                           7504819 27 +  40650429 A------G--T------G-GC--AGGGCATGGTT----TATTGT-AAAA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       154019 27 +    207569 T------G--T------G-AC--ATGACATGGCT----TTTTGT-TAGC
i Megaderma_lyra.MegLyr_scaffold_4542                    I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29596 27 -     74585 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53181 27 -    140813 T------G--T------G-GT--ATAACCTGATT----TACTAA-TAGG
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90888 27 +     93471 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12541 27 +     17804 T------A--G------A-GC--GTGGCACGGCT----TGTTGC-CAGC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                268 27 +      5551 T------A--G------A-GC--GTGGCACGGCT----TGTTGC-CAGC
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21352 27 -     26561 T------A--G------A-GC--GTGGCACGGCT----TGTTGC-CAGC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49718 28 +    145209 T------G--T-----GA-GC--ATGACTTGGCT----TATTGC-CAGC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188622 27 +    200668 T------A--C------A-GC--ATGACATGGCT----CGTTGC-CAGT
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 5 C 0
s Microtus_ochrogaster.CM001695.1                         15966608 26 +  27267610 T------G--A------A-GT--GTAGCACTATT----TACTAG--AGG
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368440 27 -   8254450 t------a--t------a-ac--atggtGCAGCT----TGTTGC-CAGT
i Miniopterus_natalensis.LDJU01000034.1                  I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46171 27 -     48117 T------A--T------A-AC--ATGATGCAGCT----TGTTGC-CAGT
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 2 C 0
s Miopithecus_ogouensis.k141_1534655                         25527 27 -     27822 C------A--G------A-GC--ATGGCATGACT----CGTTGC-CAGC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12086 27 +     27589 C------C--T------A-GC--ATGAGATGGCT----TGTTGC-CAGC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   362996 27 +    437263 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183065 27 +    366855 T------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32201 27 -     82753 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   22056 27 -     63510 T------A--C------A-GC--GTGACATGGCT----TCTCGT-TGGC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45428 27 +     47283 C------A--T------A-GC--CCGGAATGGCT----TGTTGC-CAGT
i Murina_feae.MurFea_scaffold_17764                      I 2 C 0
s Mus_caroli.LT608237.1                                   35597803 27 + 120012414 T------G--T------A-GT--ATGACATGGTT----AACTAA-TAGG
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41691343 27 + 129401213 T------G--T------C-GT--ATGACTTGGTT----AACTAA-TAGG
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58219307 22 +  89631738 --------------------T--ATGACATGGTT----AACTGA-TAGG
i Mus_pahari.LT608297.1                                  I 2 C 0
s Mus_spretus.CM004101.1                                  39500262 27 + 130317789 T------G--T------A-GT--GTGACTTGGTT----AACTAA-TAGG
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3143 27 -    124358 T------G--T------C-AC--ACGGTGTGGCT----TGTGTA-CAGT
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358472 27 +  14710649 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1225 27 -     27262 T------A--T------A-GT--ATGCTATAGCT----TTTTGT-CAGC
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797433 27 +  10118263 T------A--T------A-GC--CTGGCATGGCT----TGTTGC-CAGT
i Myotis_brandtii.KE162005.1                             I 2 C 0
s Myotis_davidii.KB100139.1                                4391607 27 +   6019432 T------A--T------A-GC--CTGGCATGGCT----TGTTGC-CAGT
i Myotis_davidii.KB100139.1                              I 2 C 0
s Myotis_lucifugus.GL429869.1                               387646 27 +   4330536 T------A--T------A-GC--CTGGCATGGCT----TGTTGC-CAGT
i Myotis_lucifugus.GL429869.1                            I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6433 27 +     18357 T------A--T------A-GC--TTGGCATGGCT----TGTTGC-CAGT
i Myotis_myotis.MyoMyo_scaffold_66571                    I 2 C 0
s Nannospalax_galili.KL204047.1                             950199 23 +   3037898 -------------------GC--AGAGCATGGTT----TGTTAA-TATG
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              32312 27 +     34575 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469533 27 -  31847680 C------C--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235654 27 -   7148211 C------A--T------A-GC--ATGACGTGGCT----TGTTGC-CAGC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131345 27 -    149072 T------A--T------A-GC--ATGACATGGCT----CATTGC-CAGT
i Noctilio_leporinus.NocLep_scaffold_7894                I 4 C 0
s Nomascus_annamensis.k141_1771965                           56625 27 -    132029 T------A--G------A-GC--ACAGCACAACT----TGTTGC-CAGC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12720 27 -     16345 T------A--G------A-GC--ACAGCACGACT----TGTTGC-CAGC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18609 27 +     22201 T------A--G------A-GC--ACAGCACAACT----TGTTGC-CAGC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416839 27 -  22158432 T------A--G------A-GC--ACAGCACGACT----TGTTGC-CAGC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29014 27 -     54323 T------A--G------A-GC--ACAGCACGACT----TGTTGC-CAGC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201963 27 +   9404916 T------T--A------A-GC--ATGACATGGCT----TATTGC-CAGC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059499 27 -  11899542 T------A--G------A-GT--ATGGTATGGCT----TTTTGC-CAGC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1455302 27 +   2017862 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442597 27 -    630418 T------A--T------A-GC--GTGGCATGGCT----TTTTGC-CAGC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22254 27 +    150152 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97223 27 -    140218 T------G--T------A-GT--GTAGCACTATT----TACTAG-TAGG
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7765 29 -     41509 T------G--T------A-GTGTATAGCATGGTT----TACTAA-TAGG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8106067 27 +  10937097 c------a--t------a-gc--ATGACATGGCT----TGTTGC-CAGC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3057 27 +     11607 T------A--T------A-GC--ATGACGTGGCT----TGTTGC-CAGC
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108708 24 - 174332312 T------A--T------A--T--ACAGTGTG--T----TATCAC-CAGC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42913 27 +    559221 T------T--A------A-GC--ATGACATGGCT----TATTGC-CAGC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26410996 27 -  44047080 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGT
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11619 27 +     17875 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  586 27 +      1186 T------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Pan_paniscus.AJFE02001037.1                            I 22 I 24
s Pan_troglodytes.CM009242.2                               1477206 27 - 189151597 T------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Pan_troglodytes.CM009242.2                             I 81 I 24
s Panthera_onca.PanOnc_flattened_line_3271                   28554 27 -    230217 T------A--T------A-GC--ATGACATGACT----TCTCGT-TGGC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465786 27 -  18783137 T------A--T------A-GC--ATGACATGACT----TCTCGT-TGGC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976387 27 +   8748460 T------A--T------A-GC--ATGACATGACT----TCTCGT-TGGC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622514 27 +   2937107 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGT
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246443 27 - 183742232 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12728 27 +     21308 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295471 27 -  20919399 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25370 27 -     27687 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2047 27 +     10553 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  2008 27 -     10386 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18723 27 +     78924 T------A--G------A-GA--ATTACATGGCT----TATTGT-TGGC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7549 27 +      9367 C------A--T------A-GC--ATGGCATGGCT----TATTGC-CAGG
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         250984 27 +  18517816 T------G--T------A-GT--GTAGCATGGTT----TACTAA-TAGG
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35555 28 -     56120 C------A--G------AGGG--ATGACATCACT----TTTTGT-CAGC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7588 27 -     63832 C------A--T------A-GC--ATGACGTGGCT----TGTTGC-CAGC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5693 27 +     55023 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5216 27 -     89929 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5804 27 +     40849 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257533 27 +  14605196 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7923 27 +     22231 T------A--T------A-GC--CTGGCATGACT----TGTTGC-CAGT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 2 C 0
s Pithecia_albicans.k141_1239476                             67058 27 +    207309 G------A--G------A-GC--TTGGCATGGCT----TGTTGC-CAGC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8153 27 -     25401 G------A--G------A-GC--TTGGCATGGCT----TGTTGC-CAGC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33899 27 +     58159 G------A--G------A-GC--TTGGCATGGCT----TGTTGC-CAGC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34175 27 +     63561 G------A--G------A-GC--TTGGCATGGCT----TGTTGC-CAGC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33930 27 +     51148 G------A--G------A-GC--TTGGCATGGCT----TGTTGC-CAGC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558906 27 -   4542175 G------A--G------A-GC--TTGGCATGGCT----TGTTGC-CAGC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33914 27 +     51125 G------A--G------A-GC--TTGGCATGGCT----TGTTGC-CAGC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4609 27 +     19503 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10346 27 +     39866 C------A--G------A-GC--CTGGCTCGCTT----TGCTGC-CAGC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5428 27 -      9282 C------A--G------A-GC--CTGGCTCGCTT----TGCTGC-CAGC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44832 27 -     87950 C------A--G------A-GC--CTGGCTCGCTT----TGCTGC-CAGC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45226 27 -     88961 C------A--G------A-GC--CTGGCTCGCTT----TGCTGC-CAGC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9924 27 -     39403 C------A--G------A-GC--CTGGCTCGCTT----TGCTGC-CAGC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44876 27 +     87928 C------A--G------A-GC--CTGGCTCGCTT----TGCTGC-CAGC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9923 27 -     60166 C------A--G------A-GC--CTGGCTCGCTT----TGCTGC-CAGC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16844 27 -     67232 C------A--G------A-GC--CTGGCTCGCTT----TGCTGC-CAGC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44776 27 -     90634 C------A--G------A-GC--CTGGCTCACTT----TGCTGC-CAGC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46243 27 +     89403 C------A--G------A-GC--CTGGCTCGCTT----TGCTGC-CAGC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182394 24 - 189387572 T------A--G------A-GC--ACGGCACGAC-------TTGC-CAGC
i Pongo_abelii.CM009266.2                                C 0 I 9
s Pongo_pygmaeus.ctg66                                      197136 24 -   9816681 T------A--G------A-GC--ACGGCACGAC-------TTGC-CAGC
i Pongo_pygmaeus.ctg66                                   C 0 I 9
s Presbytis_comata.k141_1230337                              30891 27 +     69807 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48074 27 -     80239 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2820 27 -     12774 t------g--c------a-gc--atgacatggct----tgctgc-cacc
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Psammomys_obesus.NESX01036366.1                            40715 27 +     52041 T------G--T------G-GT--ATAACCTGATT----TACTAA-TAGG
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55704 27 -     66298 t------a--t------g-gc--aTGACATGGCT----CGTTGC-TAGT
i Pteronotus_parnellii.KE847780.1                        I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8081 27 -     18639 C------A--T------A-GC--ATGACATGGTT----TGTTGC-CAGC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844279 24 -  28871421 -----------------a-gc--aTGGCATAGCT----TTTTGC-CAGC
i Pteropus_alecto.KB030862.1                             I 39 C 0
s Pteropus_vampyrus.KN525825.1                             3540795 24 -   4952924 -----------------a-gc--aTGGCATGGCT----TTTTGC-CAGC
i Pteropus_vampyrus.KN525825.1                           I 39 C 0
s Puma_concolor.QAVW01001104.1                            18102772 27 +  38429054 T------A--T------A-GC--ATGACATGACT----TCTCGT-TGGC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             30260 27 +     91421 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156811 27 -   7812017 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11111 27 +     72585 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5115 27 -     55207 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGC
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37025922 27 -  90668790 T------G--T------C-GC--TTGGCATGGTT----GACTAA-TAGG
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918173 27 +   3329780 T------A--T------A-GC--ATGAGATGGCT----TTTTGC-CAAC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4717 27 +      7119 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125387 27 + 195417433 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239559 27 -   7961872 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79025 24 -    116970 -----------------A-GC--ATGACATGGCT----TTTTGC-CAGC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 45 C 0
s Saguinus_bicolor.k141_161125                                9618 27 +     12412 T------G--G------A-GC--GTGGCACGGCT----TGCTGC-CAGC
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               940 27 +      9876 T------G--G------A-GC--GTGGCACGGCT----TGCTGC-CAGC
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16536 27 -     24931 T------G--G------A-GC--GTGGCACGGCT----TGCTGC-CAGC
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1415 27 +      4564 T------G--G------A-GC--GTGGCACGGCT----TGCTGC-CAGC
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4220 27 -      7443 T------G--G------A-GC--GTGGCACGGCT----TGCTGC-CAGC
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395253 27 - 209938924 T------G--G------A-GC--GTGGCACGGCT----TGCTGC-CAGC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1837 27 +     10149 T------G--G------A-GC--GTGGCACGGCT----TGCTGC-CAGC
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1181 27 +     10417 T------G--G------A-GC--GTGGCACGGCT----TGCTGC-CAGC
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14566 27 +     16473 T------A--T------A-GC--ATGGCATGGCT----TTTTGC-CAGT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111305 27 + 121099817 C------G--G------A-GC--TTGTCGCGGCT----TGCTAC-CAGC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32874 27 -     47369 C------G--G------A-GC--TTGTCGCGGCT----TGCTAC-CAGC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33257 27 -     79414 C------G--G------A-GC--TTGTCGCGGCT----TGCTAC-CAGC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29948 27 -     34454 C------G--G------A-GC--TTGTCGCGGCT----TGCTAC-CAGC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17350 27 -     22428 C------G--G------A-GC--TTGTCGCGGCT----TGCTAC-CAGC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32504 27 -     47109 C------G--G------A-GC--TTGTCGCGGCT----TGCTAC-CAGC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240528 27 +   5703754 C------A--G------A-GC--TTGGCGCGGCT----TGCTGC-CAGC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10119 27 +     21866 C------A--G------A-GC--TTGGCGCGGCT----TGCTGC-CAGC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122597 27 +    313613 C------A--T------A-GC--ATGACGTGGTT----TGTTGC-CAGT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 C 0
s Semnopithecus_entellus.k141_583282                          1698 27 +     11297 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32091 27 +     58920 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18589 27 -     45317 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26247 27 -     42441 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28923 27 -     29113 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          32011 27 -     48123 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52767 27 +     77746 C------A--C------A-GT--GTAGCATAGTT----AACTAA-TAGG
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867383 27 -   1910179 T------A--T------A-AC--ATGACATGATT----CTTTGC-CAGG
i Solenodon_paradoxus.SolPar_flattened_line_126          I 44 C 0
s Sorex_araneus.JH798187.1                                 4674597 22 +  18376816 --------------------c--atggCCTGGCT----TTTTGC-CAGT
i Sorex_araneus.JH798187.1                               I 9 C 0
s Spermophilus_dauricus.KZ294078.1                         1872182 27 +   3870691 A------G--T------G-GC--AGGGCGTGGTT----TATTGC-AAAA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16306 27 -     97271 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128932 27 +    196729 T------A--C------A-GT--GAGACATGGCA----TCTTGT-TGGC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6648207 27 +  69701581 T------A--T------A-CC--ATGACATGGCT----TGTTGC-CAGC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       394096 27 +   1523678 T------A--C------A-GC--ACAGCACGACT----TGTTGC-CAGC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17641 27 +     22964 T------A--T------A-GC--ATAACATGGCT----TGTTGC-CAGT
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 2 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      195040 27 +    199430 T------A--T------A-AC--AGGACATGGCT----TGTTGC-CAGC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    109020 27 -    539355 T------A--T------A-AC--AGGACATGGCT----TGTTGT-CAGC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4649 27 +      9917 T------A--T------A-GC--ATGGCATGGCT----CATTGC-CAAC
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11445 27 +     20590 T------A--T------A-GC--ATGGCATGGCT----CATTGC-CAAC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356254 27 - 186847797 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27872 27 -     33621 C------A--G------A-GT--ATGGCATCACT----TTTTGT-CAGC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22612 27 -     31044 T------A--C------A-GC--GTGACGTGGCC----TGTTTC-CAGC
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483952 27 -    610378 T------A--C------A-GC--ATGACATGGCG----CGTTGC-CAGT
i Tonatia_saurophila.TonSau_scaffold_294                 I 5 C 0
s Trachypithecus_auratus.k141_1189070                        24000 27 +     26378 C------A--G------A-GC--ATGGCACGATT----TGTTGC-CAGC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36798 27 -     78344 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23325 27 +     25722 C------A--G------A-GC--ATGGCACGATT----TGTTGC-CAGC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31754 27 -     62838 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31745 27 +     46913 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12483 27 -     28527 C------A--G------A-GC--ATGGCACGATT----TGTTGC-CAGC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33685 27 -     64340 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31723 27 -     63452 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13174 27 +     22490 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1140 27 +      9911 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          935 27 -     33539 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258694 27 -   6242583 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4713 27 +     19340 C------A--G------A-GC--ATGGCACGACT----TGTTGC-CAGC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177825 27 -    200418 T------G--T------A-AC--ATGGCATGGCT----TTTTGC-CACA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485624 27 -  10818551 T------A--T------A-GC--AAGACGTGGCT----CGTTGC-CACC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839604 27 -   4065304 T------A--T------A-GC--TTGGCATGGCT----TGTTGC-CAGA
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13682 27 -     70247 T------A--T------A-GC--TTGGCATGGCT----TGTTGC-CAGA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369191 27 -  33153633 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7382 26 -     21056 T------A--T------A-GC--ATGATGTGGTT----TGTTGC-CA-T
i Uropsilus_gracilis.UroGra_scaffold_46687               I 6 C 0
s Ursus_maritimus.KK499267.1                                185506 27 +   5085361 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   80324 27 +   5488506 T------G--T------T-GC--GTGGCATGGCT----TGTTGC-CGGC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108857 27 -    112863 T------T--A------A-GC--ATGACATGGCT----TATTGC-CAGC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        178054 27 -    224448 A------G--T------G-GC--AGGGCATGACT----TATTGT-AAGC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32508 27 -     86975 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       4559 27 -     63895 T------G--A------A-GC--ATACCATGGCC----TATTAA-CAGT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1153 27 +      3447 C------A--T------A-GC--ATGACATGGCT----TGTTGC-CAGC
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Castor_canadensis.CasCan_scaffold_39952                    31579  0 -     39886 C

a score=0.000000
s hg38.chrUn_KI270755v1                                      10081 24 +     36723 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
s Acinonyx_jubatus.LLWD01001279.1                           816573 24 +   1699592 TT------TA------TATCA-----CATC-TG--T-CTTC-TGGG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     28813 24 +     63021 TT------GA------TGTCA-----CCCC-CT--G--ACTTTTTT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419079 24 +  29979442 TT------TA------TTTCA-----CATC-TG--T-CTTC-TGGC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            219077 24 +    347723 TT------TA------TTTCA-----CAAC-TG--T-CTTC-TGGC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    21589 15 -     61208 TT------TA------TATCA-----TACC-TT-------------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 1
s Allenopithecus_nigroviridis.k141_3755588                   51027 24 +     53615 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3055 24 +     13857 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19611 24 -     21945 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21296 24 +     32033 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74551 24 -     84148 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46805 24 -     78289 CT------CA------CACCA-----CGTC-TG--T-CTCC-TGCT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46221 24 +     55831 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44683 24 -     64179 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1786 24 -      3959 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43308 24 +     45454 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48957 24 +     70886 CT------CA------CACCA-----CATC-TA--T-CTCC-TGCT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11127 24 +     30854 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35263 24 +     42133 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592282 24 +   2318259 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180690 24 -    412891 TT------CA------TATCA-----CATC-TC--T-CTTC-TGGT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53438 24 -     68529 TT------CA------CATCA-----CATC-TG--T-CTCC-TGGT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3468 24 +     17741 CT------CA------CACCA-----CATC-AG--T-CTCC-TGCT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4093 24 -     15923 CT------CA------CACCA-----CATC-AG--T-CTCC-TGCT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674375 24 +   5030052 CT------CA------CACCA-----CATC-AG--T-CTCC-TGCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4369 24 -     16391 CT------CA------CACCA-----CATC-AG--T-CTCC-TGCT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3928 24 -     17186 CT------CA------CACCA-----CATC-AG--T-CTCC-TGCT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27539 23 -     32367 GT------TG------CATCA-----CAAC-TG--T-C-TC-TGGT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9204 24 -     15198 TT------CA------CATCA-----CATC-TC--T-CTTC-TGGT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               277026 24 +  21539123 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13191 24 +     48076 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8327 24 -     28759 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35883 24 +     44353 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51253 24 -     71267 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25311 24 -     33135 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966933 24 -  23207421 TT------CA------CATCA-----CATC-TG--T-TTCC-tggt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3434 24 -     25979 TT------CA------CATCA-----CATC-TG--T-TTCC-tggt
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93269 24 +    124022 TT------CA------CATCA-----CATC-TG--T-CTCC-TGGT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36458 24 +    288883 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423611 24 -  48749331 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      769212 24 +   1948126 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559757 24 -  45695690 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536438 24 -   4408762 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                  10105 24 +     28062 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45396 24 -     91139 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22923 24 +     95584 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22836 24 +    119600 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12459 24 +     18648 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11966 20 -     13885 CT------CA------CACCA-----C-----G--T-CTCC-TGCT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            4173 24 -      8861 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456515 24 + 189096842 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               4089 24 +      8664 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7634977 24 +  17673402 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4669278 24 +   7040546 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1212976 24 +   1652518 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42509018 23 +  60362399 TT------TA------TTTCA-----CATC-TG--T-C-TC-TGGC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12653 23 -     23171 TT------TA------TTTCA-----CATC-TG--T-C-TC-TGGC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          225994 23 +   9314153 TT------TA------TTTCA-----CATC-TG--T-C-TC-TGGC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41619131 23 +  59632846 TT------TA------TTTCA-----CATC-TG--T-C-TC-TGGC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110712 23 -  63665305 TT------TA------TTTCA-----CATC-TG--T-C-TC-TGGC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416286 24 -  46296322 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598283 24 +  44709034 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2194 24 -     20114 TC------CA------CATCA-----CACC-TG--T-CTTC-TATA
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274485 24 +    496798 TT------CA------CATCA-----AACT-TG--C-CTTC-TGAT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               4077 24 +      9923 TT------CA------TATCA-----CATC-TC--T-CTTC-TGGT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31579 12 -     39886 -----------------------------C-TG--T-CTTC-TGGC
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83286 24 -    217609 CT------CA------CATCA-----CATC-TG--T-CTCC-TGGT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              5000164 24 +  23392119 TC------CA------CATCA-----CATC-TG--T-CTTC-TGGA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5003605 24 +  23407841 TC------CA------CATCA-----CATC-TG--T-CTTC-TGGA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          490 24 -    143979 TC------CA------CATCA-----CATC-TG--T-CTTC-TGGA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_niveiventris.k141_592277                           7430 24 -     12580 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45539 24 +     53515 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376165 24 -  26074798 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10234 24 -     34880 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69332 24 -     89041 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2148 24 -     76265 TT------CA------CATCA-----AACT-TG--C-CTTC-TGAT
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495607 24 -  27778364 TT------TA------CATCA-----CATC-TG--T-CCTC-TGGT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22440 24 +     27315 TT------TA------CATCA-----CATC-TG--T-CCTC-TGGT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                144111 24 -   4669795 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                           85 24 +      3297 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3283 24 -     14410 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47665 24 -    148725 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29942 24 -     40656 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9901 24 +     20796 CT------CA------CATCA-----CGTC-TG--T-CTTC-TGCT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            15015 24 -     17524 CT------CA------CATCA-----CGTC-TG--T-CTTC-TGCT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30748 24 -     34525 CT------CA------CATCA-----CGTC-TG--T-CTTC-TGCT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14526 24 -     25376 CT------CA------CAGCA-----CGTC-TG--T-CTTC-TGCT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367115 24 -  39242232 CT------CA------CATCA-----CGTC-TG--T-CTTC-TGCT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272840 24 +  21565898 CT------CA------CAGCA-----CGTC-TG--T-CTTC-TGCT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35207 24 -     45857 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30108 24 -     32606 CT------CA------CATCA-----CGTC-TG--T-CTTC-TGCT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6263 24 +      8499 CT------CA------CATCA-----CGTC-TG--T-CTTC-TGCT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28668 24 +     70610 CT------CA------CAGCA-----TGTC-TG--T-CTTC-TGCT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25630 24 +     36323 CT------CA------CATCA-----CGTC-TG--T-CTTC-TGCT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15532 24 -     19938 TT------CT------CATCA-----CACC-TG--T-CATT-TTGT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            11201 22 -     32913 CT------CA------CACCA-----CGT---G--T-CTCC-TGCC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21614 22 -     40346 CT------CA------CACCA-----CGT---G--T-CTCC-TGCC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21868 22 +    216457 CT------CA------CACCA-----CGT---G--T-CTCC-TGCC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21658 22 +     39636 CT------CA------CACCA-----CGT---G--T-CTCC-TGCC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33748 24 -     52013 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44736 24 -    112038 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10286 24 +     34062 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346530 24 +  18827391 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13069 24 -     44032 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307916 24 - 135778131 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2208 24 +     10270 TT------CA------CATCA-----CACC-TG--T-CATT-TGGT
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            609685 24 -    839153 TT------CA------CATCA-----CACC-TG--T-CATT-TGGT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2454 24 -      4087 AT------CA------CATCA-----CACC-TG--T-CTTC-TGGT
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412325 24 -   2368649 CT------CA------CATCG-----CATC-TG--T-CTTC-TGCT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382207 24 - 200372422 CT------CA------CATCG-----CATC-TG--T-CTTC-TGCT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5760 24 -     84244 CT------CA------CATCG-----CATC-TG--T-CTTC-TGCT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810787 24 +  53390261 TT------CA------TTGCA-----CATC-TG--T-CTTT-TGGT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6356 24 -      8242 TT------CA------CATCA-----CATC-TG--T-CTTC-TGGT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47507 23 -     83289 TT------CA------TGTCA-----TCCC-CC--A--ACC-CCAT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213119021 27 - 224834208 TT------CA------CATCA-A-CACCCTCCC--T--TCC-CTGT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_77846              12648  9 +     12657 TT------TA------CATTA-------------------------
i Crocidura_indochinensis.CroInd_scaffold_77846          C 0 N 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7960 24 +     87169 TA------TA------TATCA-----CATC-TG--T-CTTC-TGGC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650243 25 -   1526836 TT------CT------CATTA-----CACT-CA--TACTTC-TGGT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22867 24 +     50838 TC------CA------AATCA-----CATC-TG--T-CTTC-CATA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12355 24 +     36344 TC------CA------CATCA-----CATC-TG--T-CTTC-TGCA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31795 24 +     75252 TC------CA------CATCA-----CATC-TG--T-CTTC-TGGA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2113271 29 -   2246927 ttctgcaaCA------C-TCA-----CACC-TG--G-CGTT-TGGT
i Dasypus_novemcinctus.JH564415.1                        I 381 C 0
s Delphinapterus_leucas.KZ290073.1                        18635345 24 -  35494412 TT------CA------CATCA-----CATC-TG--T-TTCC-tggt
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11869070 24 -  20541912 TT------CA------CATCA-----CATC-TC--T-CTCC-TGGC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667878 24 -   1390856 TT------TA------CATCA-----CATC-TG--T-CCTC-TGGT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142683 24 -    198055 TT------TG------CACCA-----CATC-TG--T-CCTC-TGGT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955366 23 -  37912305 TT------CC------TATAA-----T-CC-TG--T-CTCC-TGGT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                    978 23 +     14058 TT------CC------TATAA-----T-CC-TG--T-CTCC-TGGT
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 12928 24 +     14636 TC------CA------CATCA-----CATC-TG--T-CTTC-TGGA
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62858565 24 - 111700974 TT------CA------TATCA-----CACC-TG--C-CTTC-TGGT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9753 24 +     19438 TT------CA------CATCA-----CATC-TG--C-CTTC-TGGT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       246072 24 -    607251 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9113604 24 -  10337057 TT------CA------CATCA-----CACC-TG--A-TTTC-TGGT
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35220 33 +    110024 TT------TACTGGGAGGTCA-A-CACCACCAC--T--CCc-ctgt
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           17149 25 +     18970 TT------TA------TGTCA-A-CACCACCCC--T--C---CCGT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925611 24 +  41312741 TT------TA------TTTCA-----CATC-TA--T-TTTC-TGGC
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582839 24 +  14770903 CT------TA------TATCA-----CATC-TC--T-CTTC-TGGG
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045346 24 -   4378816 TT------CA------CATCA-----CATC-TG--T-CTTC-TGGT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379276 24 +  39960074 TT------CA------CATCA-----CATC-TG--T-CTTC-TGGT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415258 24 -    498745 TT------CA------CATCA-----CATC-TG--T-CTTC-TGGT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671556 24 +   7059049 TT------CA------CATTA-----CATC-TG--T-CTTC-TGGT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               266058 24 +  21539334 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74548 24 -    133382 TT------CA------CATCA-----CATC-TG--T-TTCC-TGGT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2270 24 +     25849 TT------CA------CATCA-----CATC-TG--T-TTCC-TGGT
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250575 24 - 206538554 TT------TA------TATCA-----CATC-TG--T-CTTC-TGGG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120531 24 - 205367284 TT------TA------TATCA-----CATC-TG--T-CTTC-TGGG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  1173 24 +     25330 TT------TA------TATCA-----CATC-TG--T-CTTC-TGGG
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2926157 24 -   3816255 TC------CA------CATCA-----CAGT-TG--T-CTTC-TGGA
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                5144 24 -     28519 TT------CA------TACCA-----CATC-TG--T-CTTC-TGGT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2330 24 +    660261 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            5158 24 -      6791 TT------CA------CATCA-----CACC-CA--C-CTTC-TGGT
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                834 24 -      2763 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                259254 24 - 186649187 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    7074 24 -     78134 CT------CA------CATCA-----CACT-CA--C-CTTC-TGCT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34333 24 -    327341 TT------TA------CATCA-----CATC-TG--T-TCTC-TGGC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 15997 24 +     48891 TT------CA------CATCA-----CATT-TG--T-CTCC-TGGT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938594 18 -  22651954 ------------------TCA-----CAGC-TA--T-CTTC-TGGA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6315 24 +      8654 TT------CA------TGCCA-----CACC-TG--T-CTTC-TCAT
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11383 24 -     36432 TC------CA------CATCA-----CATG-TG--T-CTCC-TGGT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556428 24 -   1711038 NN------NN------NNNNN-----NNNN-NN--N-NNNN-NNNN
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                151 24 -      8370 TT------CA------CATCA-----CATC-TG--T-CTTC-TGGT
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145717 24 -    630532 CT------CA------CGTCA-----CATC-TG--T-TTTC-TGCT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  73995 24 +     83186 CT------GA------TATCA-----CATC-TG--T-CTTC-TGGC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75532 24 +    143317 TC------CA------CATCA-----CATC-TG--T-CTTC-TGGA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               8764 24 +     12352 CT------CA------CATCA-----CATC-TG--T-TTTC-TGCT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15951 24 +     55766 CT------CA------CATCA-----CATC-TG--T-TTTC-TGCT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055479 24 + 191637585 CT------CA------CATCA-----CATC-TG--T-TTTC-TGCT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804357 24 +  11177569 CT------CA------CATCA-----CATC-TG--T-TTTC-TGCT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11397 24 -    135385 TC------CA------CATCA-----CACC-TG--T-TTTC-TGGA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390646 24 +   7955117 TT------CA------CATCA-----CACA-TG--T-CTAC-Tggt
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13449 24 -     16823 TT------CA------CATCA-----CATC-TG--T-TTCC-TGGT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1243136 15 +   9596543 TT------TA------Tatca-----tacc-tt-------------
i Jaculus_jaculus.JH725527.1                             C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_3970                 75287 24 -     97402 TT------CA------CATCA-----CATC-TG--T-TTCC-TGGT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45573 24 +    110728 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1526 24 -     25587 CT------TC------TATCA-----CATC-TC--T-CTTC-TGGG
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                        1018 24 -     23187 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1332 24 -     14280 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         972 24 +      3713 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1158 24 +      8855 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5959 24 -     13645 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816880 24 -   3914936 TT------TA------TTTCA-----CATC-TG--T-CTTC-TGGC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     22071 24 +     24238 TT------CA------TAGCA-----TACC-TG--T-CTTA-TGGT
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344631 24 +    662738 TT------CA------CATCA-----CATC-TG--T-TTCC-tggt
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               336988 24 -   1826925 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39088048 29 +  43346337 TT------CA------CGTCAGAAGACACC-TG--T-CTTC-TGGT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618286 23 +  59628241 TT------TA------TTTCA-----CATC-TG--T-C-TC-TGGG
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48385 24 -     61512 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 376047 24 -  60120075 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28315 24 +     30207 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3153 24 -      5035 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28268 24 +     30527 CT------CA------CATCA-----CATC-TG--T-CTTC-TGTT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39444 24 -     50087 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49189 24 +     51645 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418391 24 - 187317192 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402622 24 +  25927173 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51793 24 -     62418 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4324 24 +     14901 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48266 24 +     59329 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274173 24 +    668171 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2805 24 -      5049 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5972 24 +     17132 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226726 24 -    270270 TT------CG------CACCA-----CATC-TG--C-CTTT-TGAT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325455 24 +  24302211 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360286 24 -    752769 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676908 24 -    737560 TT------CA------TATCA-----CTTC-TG--T-CTTC-TGGT
i Manis_javanica.JSZB01003497.1                          I 1 C 0
s Manis_pentadactyla.KN006162.1                             224204 24 +    317179 TT------CA------TATCA-----CTTC-TC--T-CTTC-TGGT
i Manis_pentadactyla.KN006162.1                          I 1 C 0
s Marmota_marmota.CZRN01000018.1                           7504846 24 +  40650429 TT------CA------CATCA-----CACA-TG--T-CTAC-TGgt
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       154046 24 +    207569 TT------CA------CAGCA-----CATC-TG--T-CTTC-TGGT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29623 24 -     74585 TT------TA------TTTCA-----CATC-TA--T-TTTC-TGGC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53208 24 -    140813 TT------CA------TGTCA-----CCCC-CT--G--ACCTTTGT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90915 24 +     93471 TT------CA------CATCA-----CATC-TG--T-TTCC-TGGT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12568 24 +     17804 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                295 24 +      5551 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21379 24 -     26561 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49746 24 +    145209 TT------TG------TATCA-----CACA-TG--T-CTTC-TGGT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188649 24 +    200668 TT------CG------TATCA-----CATC-TC--T-CTTC-TGGT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966634 27 +  27267610 TT------CA------TGTCA-A-CACCACCCC--T--CTC-CTGT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368467 24 -   8254450 TT------TA------TATCA-----CATC-TC--T-CTTC-TGGG
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46198 24 -     48117 TT------TA------TATCA-----CATC-TC--T-CTTC-TGGG
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25554 24 -     27822 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12113 24 +     27589 TT------TA------TTTCA-----CATC-TG--T-CTTC-TGGC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   363023 24 +    437263 TT------CA------CATCA-----CATC-TC--T-TTCC-TGGT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183092 24 +    366855 TT------CA------TACCA-----CATC-TC--T-CTTC-TGGT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32228 24 -     82753 TT------CA------CATCA-----CATC-TG--T-CTCC-TGGT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   22083 24 -     63510 TT------TA------CATCA-----CATC-TG--T-CCTC-TGGC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45455 24 +     47283 CT------TA------TATCA-----CATC-TC--T-CTTC-TGGG
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35597830 24 + 120012414 TT------CA------TGTCA-----CTCC-CT--G--ACCTTTTT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41691370 24 + 129401213 TT------CA------TGTCA-----CCCC-CT--G--ACCTTTTT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58219329 24 +  89631738 TT------CA------TGTCA-----TCCC-CT--G--ATCTTTGT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39500289 24 + 130317789 TT------CA------TGTCA-----CCCA-CT--G--ACCTTTTT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3170 24 -    124358 CT------CA------CATCA-----CACC-CA--C-CCTC-TGGT
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358499 24 +  14710649 TT------TA------TTTCA-----CATC-TA--T-TTTC-TGGC
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1252 24 -     27262 TT------CA------CATCA-----CACC-TG--T-CTTC-TGTA
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797460 24 +  10118263 CT------TA------TATCA-----CATC-TC--T-CTTC-TGGG
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391634 24 +   6019432 CT------TA------TATCA-----CATC-TC--T-CTTC-TGGG
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387673 24 +   4330536 CT------TA------TATCA-----CATC-TC--T-CTTC-TGGG
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6460 24 +     18357 CT------TA------TATCA-----CATC-TC--T-CTTC-TGGG
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950222 26 +   3037898 TT------CA------TGTCA-----TACT-TAATT-TTTC-TGGT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              32339 24 +     34575 CT------CA------CATCA-----CATC-TG--T-CTTC-TACT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469560 24 -  31847680 TT------TA------TTTCA-----CATC-TG--T-CTTC-TGGC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235681 24 -   7148211 TT------CA------CATCA-----CATC-TG--T-TTCC-tggt
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131372 24 -    149072 TT------CA------TATCA-----CATC-TC--T-CTTC-CGGT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56652 24 -    132029 CT------CA------CATCA-----CATC-TG--T-TTTC-TGCT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12747 24 -     16345 CT------CA------CATCA-----CATC-TG--T-TTTC-TGCT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18636 24 +     22201 CT------CA------CATCA-----CATC-TG--T-TTTC-TGCT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416866 24 -  22158432 CT------CA------CATCA-----CATC-TG--T-TTTC-TGCT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29041 24 -     54323 CT------CA------CATCA-----CATC-TG--T-TTTC-TGCT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                201990 24 +   9404916 TT------TA------TTTCA-----CATC-TG--T-CTTC-CGGC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059526 24 -  11899542 TC------CA------CATCA-----CACC-TG--T-CTTC-TGTA
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1455329 24 +   2017862 TT------TA------TTTCA-----TATC-TA--T-CTTC-TAGC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442624 24 -    630418 TT------CA------CATCA-----CATC-TG--T-CTCC-TGgt
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22281 24 +    150152 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97250 27 -    140218 TT------CA------TGTCA-A-CACCACTCC--T--CCC-CTGT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7794 26 -     41509 TT------CA------TGTTA-A-CAACCC-CC--T--TCC-CCGT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8106094 24 +  10937097 TT------CA------CATCA-----CATC-TG--T-TTCC-tggt
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3084 24 +     11607 TT------CA------CATCA-----CACC-TG--T-CTGC-TAGT
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108732 24 - 174332312 TT------CA------CAGCA-----TATC-TG--T-CTTT-TGGT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42940 24 +    559221 TT------TA------TTTCA-----CATC-TG--T-CTTC-CGGC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26411023 24 -  44047080 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11646 24 +     17875 TT------CA------CATCA-----CATC-TG--T-CTCC-TGGT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02004363.1                                  652 24 +      1263 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Pan_paniscus.AJFE02004363.1                            I 27 I 88
s Pan_troglodytes.KZ622849.1                                 38008 24 -    110857 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Pan_troglodytes.KZ622849.1                             I 27 I 52
s Panthera_onca.PanOnc_flattened_line_3271                   28581 24 -    230217 TT------TA------TATCA-----CATC-TG--T-CTTC-TGGG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465813 24 -  18783137 TT------TA------TATCA-----CATC-TG--T-CTTC-TGGG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976414 24 +   8748460 TT------TA------TATCA-----CATC-TG--T-CTTC-TGGG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622541 24 +   2937107 TT------CA------CATCA-----CATC-TG--T-CTCC-tggt
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246470 24 - 183742232 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12755 24 +     21308 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295498 24 -  20919399 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25397 24 -     27687 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2074 24 +     10553 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  2035 24 -     10386 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18750 24 +     78924 TT------TA------TATCA-----CACC-TG--T-CTTC-TGGA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7576 23 +      9367 TT------CC------ATCAC-----A-CC-TA--G-CTCC-TGGT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         251011 26 +  18517816 TT------CA------TGTta--acaaccc-cc--t--ccc-ccat
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35583 24 -     56120 TC------CA------CATCC-----CACC-TG--T-CTCT-GGGA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7615 24 -     63832 TT------CA------CATCA-----CATC-TG--T-TTCC-TGGT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5720 24 +     55023 CT------CA------CGTCG-----CATC-TG--T-CTTC-TGCT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5243 24 -     89929 CT------CA------CGTCG-----CATC-TG--T-CTTC-TGCT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5831 24 +     40849 CT------CA------CGTCG-----CATC-TG--T-CTTC-TGCT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257560 24 +  14605196 CT------CA------CGTCG-----CATC-TG--T-CTTT-GGCT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7950 24 +     22231 CT------TA------TATCA-----CATC-TC--T-CTTC-TGAG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             67085 24 +    207309 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8180 24 -     25401 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33926 24 +     58159 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34202 24 +     63561 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33957 24 +     51148 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558933 24 -   4542175 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33941 24 +     51125 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4636 24 +     19503 TT------CA------CATCA-----CATC-TG--T-TTCC-TGGT
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 227
s Plecturocebus_bernhardi.k141_2549090                       10373 24 +     39866 CT------CA------CACCA-----CATG-TG--T-CTCC-CGCC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5455 24 -      9282 CT------CA------CACCA-----CATG-TG--T-CTCC-CGCC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44859 24 -     87950 CT------CA------CACCA-----CATG-TG--T-CTCC-CGCC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45253 24 -     88961 CT------CA------CACCA-----CACG-TG--T-CTCC-CGCC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9951 24 -     39403 CT------CA------CACCA-----CATG-TG--T-CTCC-CGCC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44903 24 +     87928 CT------CA------CACCA-----CATG-TG--T-CTCC-CGCC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9950 24 -     60166 CT------CA------CACCA-----CATG-TG--T-CTCC-CGCC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16871 24 -     67232 CT------CA------CACCA-----CATG-TG--T-CTCC-CGCC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44803 24 -     90634 CT------CA------CACCA-----CGTG-TG--T-CTCC-CGCC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46270 24 +     89403 CT------CA------CACCA-----CATG-TG--T-CTCC-CGCC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182427 11 - 189387572 -------------------------------TG--T-CTTc-tgtt
i Pongo_abelii.CM009266.2                                I 9 C 0
s Pongo_pygmaeus.ctg66                                      197169 11 -   9816681 -------------------------------TG--T-CTTC-TGCT
i Pongo_pygmaeus.ctg66                                   I 9 C 0
s Presbytis_comata.k141_1230337                              30918 24 +     69807 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48101 24 -     80239 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2847 24 -     12774 tt------ca------tgcca-----cacc-tg--t-ctTC-TCAT
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Psammomys_obesus.NESX01036366.1                            40742 23 +     52041 TT------CA------TGGCA-----CCCC-CT--G--ACCTTTT-
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55731 24 -     66298 TT------CA------TATCA-----CATC-TC--T-CTTC-TGGT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8108 24 -     18639 TT------TA------TTTCA-----CATC-TA--T-TTTC-TGGC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844303 24 -  28871421 TT------CA------CACCA-----CATC-TG--C-CTTC-TGGT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540819 24 -   4952924 TT------CA------CACCA-----CATC-TG--C-CTTC-TGGT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102799 24 +  38429054 TT------TA------TATCA-----CATC-TG--T-CTTC-TGGG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             30287 24 +     91421 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156838 24 -   7812017 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11138 24 +     72585 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5142 24 -     55207 TT------CA------CATCA-----CATC-TG--T-CTCC-TGGT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37025949 24 -  90668790 TT------CA------TGTCA-----TCCC-CT--G--ACATGTGT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918200 24 +   3329780 TT------CA------CATCA-----CATC-TG--T-CTTC-tggt
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4744 24 +      7119 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125414 24 + 195417433 CT------CA------CATCG-----CATC-TG--T-CTTC-TGCT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239586 24 -   7961872 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79049 24 -    116970 CT------CA------CACCA-----CATC-TG--T-CTTC-TGGT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9645 24 +     12412 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               967 24 +      9876 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16563 24 -     24931 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1442 24 +      4564 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4247 24 -      7443 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395280 24 - 209938924 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1864 24 +     10149 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1208 24 +     10417 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14593 24 +     16473 TT------CA------CATCA-----CATC-TG--T-CTCT-TGGT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111332 24 + 121099817 TT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32901 24 -     47369 TT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33284 24 -     79414 TT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29975 24 -     34454 TT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17377 24 -     22428 TT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32531 24 -     47109 TT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240555 24 +   5703754 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10146 24 +     21866 CT------CA------CACCA-----CATC-TG--T-CTCC-TGCT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122624 24 +    313613 TT------CA------CTGCA-----CATC-TG--T-CTTT-TGGT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1725 11 +     11297 CT------CA------CATCA-----CA------------------
i Semnopithecus_entellus.k141_583282                     C 0 I 6
s Semnopithecus_hypoleucos.k141_1910531                      32118 11 +     58920 CT------CA------CATCA-----CA------------------
i Semnopithecus_hypoleucos.k141_1910531                  C 0 I 6
s Semnopithecus_johnii.k141_843753                           18616 11 -     45317 CT------CA------CATCA-----CA------------------
i Semnopithecus_johnii.k141_843753                       C 0 I 6
s Semnopithecus_priam.k141_714795                            26274 11 -     42441 CT------CA------CATCA-----CA------------------
i Semnopithecus_priam.k141_714795                        C 0 I 6
s Semnopithecus_schistaceus.k141_1432920                     28950 11 -     29113 CT------CA------CATCA-----CA------------------
i Semnopithecus_schistaceus.k141_1432920                 C 0 I 6
s Semnopithecus_vetulus.k141_244474                          32038 11 -     48123 CT------CA------CATCA-----CA------------------
i Semnopithecus_vetulus.k141_244474                      C 0 I 6
s Sigmodon_hispidus.SigHis_scaffold_20193                    52794 26 +     77746 TT------CA------TAGCA-A-TATCCT-CA--T--TCC-CCAT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867410 24 -   1910179 TA------TT------CATCA-----CATT-TG--T-CTTT-TGGT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674619 23 +  18376816 TT------TA------CATTA-----G-TA-TT--T-CTTC-TGGc
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1872209 24 +   3870691 TT------CA------CATCA-----CACA-TG--T-CTAC-TGGt
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16333 24 -     97271 TT------TA------TTTCA-----CATC-TG--T-CTTC-TGGC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128959 24 +    196729 TT------TA------CATCA-----CATC-TG--T-CCTC-TGGT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6648234 24 +  69701581 TT------CA------CGTCA-----CATC-TG--T-CTCC-TGGT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       394123 24 +   1523678 CT------CA------CATCA-----CATC-TG--T-TTTC-TGCT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17668 24 +     22964 TT------TA------TATCA-----CATC-TC--T-CTTC-TGGT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      195067 24 +    199430 TT------CA------CATCA-----CATC-TG--T-CTTC-TGGT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    109047 24 -    539355 TT------CA------CATCA-----CATC-TG--T-CTTC-TGGT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4676 24 +      9917 TT------CA------CATCA-----AACT-TG--C-CTTC-TGAT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11472 24 +     20590 TT------CA------CATCA-----AACT-TG--C-CTTC-TGAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356281 24 - 186847797 CT------CA------CATCA-----CATC-TG--T-CTTC-TGCT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27899 23 -     33621 TC------CA------CATCC-----CAC--TG--C-CTTC-TGGA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22639 24 -     31044 TT------CT------CATCA-----CACC-TG--T-TGTT-TTGT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    483979 24 -    610378 TT------CA------TATCA-----CATC-TC--T-CTTC-TGGT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        24027 11 +     26378 CT------CA------CATCA-----CA------------------
i Trachypithecus_auratus.k141_1189070                    C 0 I 6
s Trachypithecus_crepusculus.k141_539312                     36825 11 -     78344 CT------CA------CATCA-----CA------------------
i Trachypithecus_crepusculus.k141_539312                 C 0 I 6
s Trachypithecus_cristatus.k141_180416                       23352 11 +     25722 CT------CA------CATCA-----CA------------------
i Trachypithecus_cristatus.k141_180416                   C 0 I 6
s Trachypithecus_francoisi.k141_1453105                      31781 11 -     62838 CT------CA------CATCA-----CA------------------
i Trachypithecus_francoisi.k141_1453105                  C 0 I 6
s Trachypithecus_geei.k141_1001272                           31772 11 +     46913 CT------CA------CATCA-----CA------------------
i Trachypithecus_geei.k141_1001272                       C 0 I 6
s Trachypithecus_germaini.k141_57262                         12510 11 -     28527 CT------CA------CATCA-----CA------------------
i Trachypithecus_germaini.k141_57262                     C 0 I 6
s Trachypithecus_hatinhensis.k141_31479                      33712 11 -     64340 CT------CA------CATCA-----CA------------------
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 6
s Trachypithecus_laotum.k141_928651                          31750 11 -     63452 CT------CA------CATCA-----CA------------------
i Trachypithecus_laotum.k141_928651                      C 0 I 6
s Trachypithecus_leucocephalus.k141_96450                    13201 11 +     22490 CT------CA------CATCA-----CA------------------
i Trachypithecus_leucocephalus.k141_96450                C 0 I 6
s Trachypithecus_melamera.k141_750785                         1167 11 +      9911 CT------CA------CATCA-----CA------------------
i Trachypithecus_melamera.k141_750785                    C 0 I 6
s Trachypithecus_obscurus.k141_170351                          962 11 -     33539 CT------CA------CATCA-----CA------------------
i Trachypithecus_obscurus.k141_170351                    C 0 I 6
s Trachypithecus_phayrei.ctg124                             258721 11 -   6242583 CT------CA------CATCA-----CA------------------
i Trachypithecus_phayrei.ctg124                          C 0 I 6
s Trachypithecus_pileatus.k141_2622778                        4740 11 +     19340 CT------CA------CATCA-----CA------------------
i Trachypithecus_pileatus.k141_2622778                   C 0 I 6
s Tragulus_javanicus.TraJav_scaffold_3462                   177852 24 -    200418 TT------CA------CAACC-----CATC-TG--T-CTCC-TGGT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485651 24 -  10818551 TT------CA------CATCA-----CACC-TG--T-CTTC-TGGC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839631 24 -   4065304 TT------CA------CATTC-----CATG-TG--T-CTTC-AGAT
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13709 24 -     70247 TT------CA------CATTC-----CATG-TG--T-CTTC-TGGT
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369218 24 -  33153633 TT------CA------CATCA-----CATC-TG--T-TTCC-tggt
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7408 24 -     21056 GT------CA------CTTCA-----CATC-TG--T-CTTT-TGGT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185533 24 +   5085361 TT------TA------TTTCA-----CATC-TG--T-CTTC-TGGC
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   80351 24 +   5488506 TT------CA------CATCA-----CATC-TG--T-CTCC-TGGT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108884 24 -    112863 TT------TA------TTTCA-----CATC-TG--T-CTTC-TGGC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        178081 22 -    224448 TT------CA------CATCA-----CAC---G--T-CTTC-TGGT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32535 24 -     86975 TT------TA------TTTCA-----CATC-TG--T-CTTC-TGGC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       4586 15 -     63895 TC------TA------TATCA-----TACC-TT-------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1180 24 +      3447 TT------CA------CATCA-----CATC-TG--T-TTCC-TGGT
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      10105 12 +     36723 TT---TATAC--TTTAT
s Acinonyx_jubatus.LLWD01001279.1                           816597 12 +   1699592 TT---AATGT--TTTGg
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 48
s Acomys_cahirinus.AcoCah_scaffold_21377                     28837 12 +     63021 TA---AAGGC--TTTAT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419103 12 +  29979442 TT---AATGT--TTTAT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            219101 12 +    347723 TT---AATGT--TCTAT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    21605 15 -     61208 TTAAAAATAC--TTCAA
i Allactaga_bullata.AllBul_scaffold_20030                I 1 C 0
s Allenopithecus_nigroviridis.k141_3755588                   51051 12 +     53615 TT---TATAC--TTTAT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3079 12 +     13857 TT---TATAC--TTTAT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19635 12 -     21945 TT---TATAC--TTTAT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21320 12 +     32033 TT---TATAC--TTTAT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74575 12 -     84148 TG---CGTGC--TTTAT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46829 12 -     78289 TG---CGTGC--TTTAT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46245 12 +     55831 TG---CGTGC--TTTAT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44707 12 -     64179 TG---CGTGC--TTTAT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1810 12 -      3959 TG---CGTGC--TTTAT
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43332 12 +     45454 TG---CGTGC--TTTAT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48981 12 +     70886 TG---CGTGC--TTTAT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11151 12 +     30854 TG---CGTGC--TTTAT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35287 12 +     42133 TG---CGTGC--TTTAT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592306 12 +   2318259 tt---aatat--tttat
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180714 12 -    412891 TT---AATGT--TTTGC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53462 12 -     68529 TT---AATAT--TTTAT
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3492 12 +     17741 TG---CGTAC--TTTAT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4117 12 -     15923 TG---CGTAC--TTTAT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674399 12 +   5030052 TA---CGTAC--TTTAT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4393 12 -     16391 TG---CGTAC--TTTAT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3952 12 -     17186 TG---CGTAC--TTTAT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27562 11 -     32367 TT---TATAC--TT-CT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9228 12 -     15198 TT---GATGT--TTTGC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               277050 12 +  21539123 TG---CGTAC--TTTAT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13215 12 +     48076 TG---CGTAC--TTTAT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8351 12 -     28759 TG---CGTAC--TTTAT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35907 12 +     44353 TG---CGTAC--TTTAT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51277 12 -     71267 TG---CGTAC--TTTAT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25335 12 -     33135 TG---CGTAC--TTTAT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966957 12 -  23207421 tt---aatat--tttat
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3458 12 -     25979 tt---aatat--tttat
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93293 12 +    124022 TT---AATAT--TTTAT
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36482 12 +    288883 tt---aatat--tttat
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423635 12 -  48749331 tt---aatat--tttat
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      769236 12 +   1948126 tt---aatat--tttat
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559781 12 -  45695690 tt---aatat--tttat
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536462 12 -   4408762 tt---aatat--tttat
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                  10129 12 +     28062 TG---CGTGC--TTTAT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45420 12 -     91139 TG---CGTGC--TTTAT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22947 12 +     95584 TG---CGTGC--TTTAT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22860 12 +    119600 TG---CGTGC--TTTAT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12483 12 +     18648 TG---CGTAC--TTTAT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11986 12 -     13885 TG---CGTAC--TTTAT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            4197 12 -      8861 TG---CATAC--TTTAT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456539 12 + 189096842 TG---CGTAC--TTTAT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               4113 12 +      8664 TG---TGTAC--TTTAT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7635001 12 +  17673402 tt---aatat--tttat
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4669302 12 +   7040546 tt---aatat--tttat
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1213000 12 +   1652518 tt---aatat--tttat
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42509041 12 +  60362399 TT---ACTGT--TTTAT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12676 12 -     23171 TT---ACTGT--TTTAT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          226017 12 +   9314153 TT---ACTGT--TTTAT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41619154 12 +  59632846 TT---ACTGT--TTTAT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110735 12 -  63665305 TT---ACTGT--TTTAT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416310 12 -  46296322 tt---aatat--tttat
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598307 12 +  44709034 tt---aatat--tttat
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2218 12 -     20114 AT---CATAC--TTTAC
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274509 12 +    496798 TT---TATAC--TTTAT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               4101 12 +      9923 TG---AATGT--TTTGT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31591 12 -     39886 TT---TATAC--TTTAT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83310 12 -    217609 TT---AATAT--TGTAT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              5000188 12 +  23392119 AT---TATAC--TTTAT
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5003629 12 +  23407841 AT---TATAC--TTTAT
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          514 12 -    143979 AT---TATAC--TTTAT
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_niveiventris.k141_592277                           7454 12 -     12580 TG---CATAC--TTTAT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45563 12 +     53515 TG---CATAC--TTTAT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376189 12 -  26074798 TG---CTTAC--TTTAT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10258 12 -     34880 TG---CTTAC--TTTAT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69356 12 -     89041 TG---CTTAC--TTTAT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2172 12 -     76265 TT---TATAC--TTTAT
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495631 12 -  27778364 TT---AACGT--TTTAT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22464 12 +     27315 TT---AACGT--TTTAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                144135 12 -   4669795 TT---TATAC--TTTAT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                          109 12 +      3297 TT---TATAC--TTTAT
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3307 12 -     14410 TT---TATAC--TTTAT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47689 12 -    148725 TT---TATAC--TTTAT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29966 12 -     40656 TT---TGTAC--TTTAT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9925 12 +     20796 TT---TGTAC--TTTAT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            15039 12 -     17524 TT---TGTAC--TTTAT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30772 12 -     34525 TT---TGTAC--TTTAT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14550 12 -     25376 TT---TGTAC--TTTAT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367139 12 -  39242232 TT---TGTAC--TTTAT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272864 12 +  21565898 TT---TGTAC--TTTAT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35231 12 -     45857 TT---TGTAC--TTTAT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30132 12 -     32606 TT---TGTAC--TTTAT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6287 12 +      8499 TT---TGTAC--TTTAT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28692 12 +     70610 TT---TGTAC--TTTAT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25654 12 +     36323 TT---TGTAC--TTTAT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15556 12 -     19938 TT---AATGC--TTTAT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            11223 12 -     32913 TG---CGTAC--TTTAT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21636 12 -     40346 TG---CGTAC--TTTAT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21890 12 +    216457 TG---CGTAC--TTTAT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21680 12 +     39636 TG---CGTAC--TTTAT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33772 12 -     52013 TG---CGTAC--TTTAT
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44760 12 -    112038 TG---CGTGC--TTTAT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10310 12 +     34062 TG---CGTGC--TTTAT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346554 12 +  18827391 TT---TATAC--TTTAT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13093 12 -     44032 TT---TATAC--TTTAT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307940 12 - 135778131 TT---TATAC--TTTAT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2232 12 +     10270 TT---AATAC--TTCAT
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            609709 12 -    839153 TT---AATAC--TTCAT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2478 12 -      4087 TT---AATAC--TTTAT
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412349 12 -   2368649 TT---TATAC--TTTAT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382231 12 - 200372422 TT---TATAC--TTTAT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5784 12 -     84244 TT---TATAC--TTTAT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810811 12 +  53390261 TT---ACTGT--TTTAT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6380 12 -      8242 TT---AATGT--TTTAT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47530 12 -     83289 TT---AATGG--TTTAT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213119048 12 - 224834208 TT---AAGGT--TTTAT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7984 12 +     87169 TT---AATGT--TTTAT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650268 11 -   1526836 -T---TATAC--TTTAT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22891 12 +     50838 AT---CATAC--TTTAT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12379 12 +     36344 AT---CATAC--TTTAT
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31819 12 +     75252 AT---CATGC--TCTAT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2113300 12 -   2246927 TT---ACTAC--GTCGT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635369 12 -  35494412 tt---aatat--tttat
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11869094 12 -  20541912 TT---AATGT--TTTGC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667902 12 -   1390856 TT---AACGT--TTTAT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142707 12 -    198055 TT---AACGT--TTTAT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955389 12 -  37912305 TT---TATAG--CTTAT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                   1001 12 +     14058 TT---TATAG--CTTAT
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 12952 12 +     14636 AT---TATAC--TTTAT
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 C 0
s Echinops_telfairi.JH980293.1                            62858589 12 - 111700974 TT---AATAC--TTCAT
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9777 12 +     19438 TT---AATGT--TATTT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       246096 12 -    607251 tt---aatat--tttat
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9113628 12 -  10337057 TT---AATAC--TTTGC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35253 12 +    110024 tt---aaaat--tttat
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           17174 12 +     18970 TT---AAAGT--TTTGT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925635 12 +  41312741 TT---GATGT--TCTAT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582863 12 +  14770903 TT---AATGT--TTTAT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045370 12 -   4378816 TT---AACGT--TTTAT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379300 12 +  39960074 TT---AACGT--TTTAT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415282 12 -    498745 TT---AACGT--TTTAT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671580 11 +   7059049 TT---AATGT--TTTA-
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               266082 12 +  21539334 TT---TATAC--TTTAT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74572 12 -    133382 TT---AATAT--TTTAT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2294 12 +     25849 TT---AATAT--TTTAT
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250599 12 - 206538554 TT---AATGT--TTTGg
i Felis_catus.CM001381.2                                 C 0 I 124
s Felis_catus_fca126.CM031415.1                          185120555 12 - 205367284 TT---AATGT--TTTGg
i Felis_catus_fca126.CM031415.1                          C 0 I 124
s Felis_nigripes.FelNig_flattened_line_44075                  1197 12 +     25330 TT---AATGT--TTTGG
i Felis_nigripes.FelNig_flattened_line_44075             C 0 I 124
s Fukomys_damarensis.KN121974.1                            2926181 12 -   3816255 AT---CTTAC--TTTGT
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                5168 12 -     28519 TT---TATAC--TTTAC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2354 12 +    660261 tt---aatat--tttat
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            5182 12 -      6791 TT---TATGC--TTTGT
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                858 12 -      2763 TT---TATAC--TTTAT
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                259278 12 - 186649187 TT---TATAC--TTTAT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    7098 12 -     78134 TT---TATCC--TTTAT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34357 12 -    327341 TT---AATGT--TTTAT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 16021 12 +     48891 TT---AATAT--TTTAT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938612 12 -  22651954 AT---CTTAC--TTTAT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6339 12 +      8654 TT---AATAG--TTTAT
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11407 12 -     36432 TT---AATAT--TTTAT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556452 12 -   1711038 NN---NNNNN--NNNNN
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                175 12 -      8370 TT---AATGT--TTTAT
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145741 12 -    630532 TT---TATAC--TTTAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  74019 12 +     83186 TT---AATGT--TTTAT
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75556 12 +    143317 AT---TATAC--TTTAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               8788 12 +     12352 TT---TATAC--TTTAT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15975 12 +     55766 TT---TATAC--TTTAT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055503 12 + 191637585 TT---TATAC--TTTAT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804381 12 +  11177569 TT---TATAC--TTTAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11421 12 -    135385 AT---CATAA--TTTAT
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390670 12 +   7955117 tt---tatac--tttat
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13473 12 -     16823 TT---AATAT--TTTAT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1243152 15 +   9596543 ttaaaaatcc--ttcat
i Jaculus_jaculus.JH725527.1                             I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75311 12 -     97402 TT---AATAT--TTTAT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45597 12 +    110728 TG---CGTAC--TTTAT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1550 12 -     25587 CT---AATGT--TTTAT
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                        1042 12 -     23187 TG---CGTAC--TTTAT
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1356 12 -     14280 TG---CGTAC--TTTAT
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                         996 12 +      3713 TG---CGTAC--TTTAT
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1182 12 +      8855 TG---CATAC--TTTAT
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5983 12 -     13645 TG---CGTAC--TTTAT
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816904 12 -   3914936 TT---AATGC--CTTAT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     22095 12 +     24238 TT---TATGC--CTTGC
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 1075
s Lipotes_vexillifer.KE559953.1                             344655 12 +    662738 tt---aatat--tttat
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               337012 12 -   1826925 TT---TATAC--TTTAT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39088077 12 +  43346337 TT---AATAC--TTTAT
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618309 12 +  59628241 TT---ACTGT--TTTAT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48409 12 -     61512 TT---TATAC--TTTAT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 376071 12 -  60120075 TT---TATAC--TTTAT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28339 12 +     30207 TT---TATAC--TTTAT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3177 12 -      5035 TT---TATAC--TTTAT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28292 12 +     30527 TT---TATAC--TTTAT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39468 12 -     50087 TT---TATAC--TTTAT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49213 12 +     51645 TT---TATAC--TTTAT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418415 12 - 187317192 TT---TATAC--TTTAT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402646 12 +  25927173 TT---TATAC--TTTAT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51817 12 -     62418 TT---TATAC--TTTAT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4348 12 +     14901 TT---TATAC--TTTAT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48290 12 +     59329 TT---TATAC--TTTAT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274197 12 +    668171 TT---TATAC--TTTAT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2829 12 -      5049 TT---TATAC--TTTAT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 5996 12 +     17132 TT---TATAC--TTTAT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226750 12 -    270270 TT---AATGT--TATTT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325479 12 +  24302211 TT---TATAC--TTTAT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360310 12 -    752769 TT---TATAC--TTTAT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676932 12 -    737560 TT---AATGT--TTTTT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             224228 12 +    317179 TT---AATGT--TTTTT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504870 12 +  40650429 tt---tatac--tttat
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       154070 12 +    207569 TT---AATGT--TTTAT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29647 12 -     74585 TT---AATGT--TCTCT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53232 12 -    140813 TT---AAGGC--CTTAT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90939 12 +     93471 TT---AATAT--TTTAT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12592 12 +     17804 TG---CGTAC--TTTAT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                319 12 +      5551 TG---CGTAC--TTTAT
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21403 12 -     26561 TG---CGTAC--TTTAT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49770 12 +    145209 TT---AATAC--TTTAT
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188673 12 +    200668 TT---AATGT--TTTGC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966661 12 +  27267610 TT---AAAGT--TTTGT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368491 12 -   8254450 TT---AATGT--TTTAT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46222 12 -     48117 TT---AATGT--TTTAT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25578 12 -     27822 TT---TGTAC--TTTAT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12137 12 +     27589 TT---AATGC--CTTAT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   363047 12 +    437263 TT---AATAT--TTTAT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183116 12 +    366855 TT---AATGT--TTTGT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32252 12 -     82753 TT---AATAT--TTTAT
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   22107 12 -     63510 TT---AATGT--TTTAT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45479 12 +     47283 TT---AATGT--TTTAT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35597854 12 + 120012414 TT---AAGGC--TTTAT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41691394 12 + 129401213 TT---AAGGC--TTTAT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58219353 12 +  89631738 TT---AAGGC--TTTAT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39500313 12 + 130317789 TT---AAGGC--TTTAT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3194 12 -    124358 TT---TATAC--TTTAT
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358523 12 +  14710649 TT---GATGT--TCTAT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1276 12 -     27262 AT---AACAC--TTTAC
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797484 12 +  10118263 TT---AATGT--TTTAt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391658 12 +   6019432 TT---AATGT--TTTAT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387697 12 +   4330536 TT---AATGT--TTTAT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6484 12 +     18357 TT---AATGT--TTTAT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950248 12 +   3037898 TC---AATGC--TTTCT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              32363 12 +     34575 TT---TATAC--TTTAT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469584 12 -  31847680 TT---AATGC--CTTAT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235705 12 -   7148211 tt---aatat--tttat
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131396 12 -    149072 TG---AATGC--TTTGT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56676 12 -    132029 TT---TATAC--TTTAT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12771 12 -     16345 TT---TATAC--TTTAT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18660 12 +     22201 TT---TATAC--TTTAT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416890 12 -  22158432 TT---TATAC--TTTAT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29065 12 -     54323 TT---TATAC--TTTAT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                202014 12 +   9404916 TT---ACTGT--TTTAT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059550 12 -  11899542 AT---CATAC--TTTAT
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1455353 12 +   2017862 TT---AATGC--CTTAT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442648 12 -    630418 tt---aatgt--tttat
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22305 12 +    150152 tt---aatat--tttat
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97277 12 -    140218 TT---AAAGT--TTTGT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7820 12 -     41509 TT---AAGGG--TTTAT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8106118 12 +  10937097 tt---aatat--tttat
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3108 12 +     11607 TT---AATAC--TTTAT
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107108756 12 - 174332312 TT---TATGC--CTTGc
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 703
s Otocyon_megalotis.JAEUCK010005147.1                        42964 12 +    559221 TT---ACTGT--TTTAT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26411047 12 -  44047080 tt---aatat--tttat
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11670 12 +     17875 TT---AATAT--TTTAT
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  637 12 +      1186 TT---TATAC--TTTAT
i Pan_paniscus.AJFE02001037.1                            I 24 C 0
s Pan_troglodytes.CM009242.2                               1477257 12 - 189151597 TT---TATAC--TTTAT
i Pan_troglodytes.CM009242.2                             I 24 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   28605 12 -    230217 TT---AATAT--TTTGG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 48
s Panthera_pardus.KV860321.1                              18465837 12 -  18783137 TT---AATAT--TTTGg
i Panthera_pardus.KV860321.1                             C 0 I 57
s Panthera_tigris.KE722367.1                               3976438 12 +   8748460 TT---AATAT--TTTGG
i Panthera_tigris.KE722367.1                             C 0 I 55
s Pantholops_hodgsonii.KE114653.1                          1622565 12 +   2937107 tt---aatat--tttat
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246494 12 - 183742232 TT---TATAC--TTTAT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12779 12 +     21308 TT---TATAC--TTTAT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295522 12 -  20919399 TT---TATAC--TTTAT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25421 12 -     27687 TT---TATAC--TTTAT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2098 12 +     10553 TT---TATAC--TTTAT
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  2059 12 -     10386 TT---TATAC--TTTAT
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18774 12 +     78924 TT---AATGT--TCTAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7599 12 +      9367 TT---TATAG--TTTAT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         251037 12 +  18517816 tt---aaGAT--TTTAT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35607 12 -     56120 AT---CTTGT--TTTAT
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7639 12 -     63832 TT---AATAT--TTTAT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5744 12 +     55023 TT---TATAC--TTTAT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5267 12 -     89929 TT---TATAC--TTTAT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5855 12 +     40849 TT---TATAC--TTTAT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257584 12 +  14605196 TT---TATAC--TTTAT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7974 12 +     22231 TT---AATGT--TTTAT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             67109 12 +    207309 TG---CGTGC--TTTAT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8204 12 -     25401 TG---CGTGC--TTTAT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33950 12 +     58159 TG---CGTGC--TTTAT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34226 12 +     63561 TG---CGTGC--TTTAT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33981 12 +     51148 TG---CGTGC--TTTAT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558957 12 -   4542175 TG---CGTGC--TTTGT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33965 12 +     51125 TG---CGTGC--TTTAT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4887 12 +     19503 TT---AATAT--TTTAT
i Platanista_gangetica.PlaMin_flattened_line_83166       I 227 C 0
s Plecturocebus_bernhardi.k141_2549090                       10397 12 +     39866 TG---CATAC--TTTAT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5479 12 -      9282 TG---CATAC--TTTAT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44883 12 -     87950 TG---CATAC--TTTAT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45277 12 -     88961 TG---CATAC--TTTAT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9975 12 -     39403 TG---CATAC--TTTAT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44927 12 +     87928 TG---CATAC--TTTAT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9974 12 -     60166 TG---CATAC--TTTAT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16895 12 -     67232 TG---CATAC--TTTAT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44827 12 -     90634 TG---CATAC--TTTAT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46294 12 +     89403 TG---CATAC--TTTAT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182438 12 - 189387572 tt---tatac--tttat
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197180 12 -   9816681 TT---TATAC--TTTAT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30942 12 +     69807 TT---TATAC--TTTAT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48125 12 -     80239 TT---TATAC--TTTAT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2871 12 -     12774 TT---AATAG--TTTAT
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Psammomys_obesus.NESX01036366.1                            40765 12 +     52041 TT---AAGGC--CTTAT
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55755 11 -     66298 TT---AATGT--T-TGT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8132 12 -     18639 TT---GATGT--TCTAT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844327 12 -  28871421 TT---AATGT--TATTT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540843 12 -   4952924 TT---AATGT--TATTT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102823 12 +  38429054 TT---AATGT--TTTgg
i Puma_concolor.QAVW01001104.1                           C 0 I 62
s Pygathrix_cinerea.k141_1153803                             30311 12 +     91421 TT---TATAC--TTTAT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156862 12 -   7812017 TT---TATAC--TTTAT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11162 12 +     72585 TT---TATAC--TTTAT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5166 12 -     55207 TT---AATGT--TTTAT
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37025973 12 -  90668790 TT---AAGGT--TTTAT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918224 12 +   3329780 tt---aatat--tttat
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4768 12 +      7119 TT---TATAC--TTTAT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125438 12 + 195417433 TT---TATAC--TTTAT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239610 12 -   7961872 TT---TATAC--TTTAT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79073 12 -    116970 TT---AATGT--TATTT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9669 12 +     12412 TG---CGTAC--TTTAT
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                               991 12 +      9876 TG---CGTAC--TTTAT
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16587 12 -     24931 TG---CGTAC--TTTAT
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1466 12 +      4564 TG---CGTAC--TTTAT
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4271 12 -      7443 TG---CGTAC--TTTAT
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395304 12 - 209938924 TG---CGTAC--TTTAT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1888 12 +     10149 TG---CGTAC--TTTAT
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1232 12 +     10417 TG---CGTAC--TTTAT
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14617 12 +     16473 TT---AATAT--TTTAT
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111356 12 + 121099817 TG---CGTAC--TTTAT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32925 12 -     47369 TG---CGTAC--TTTAT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33308 12 -     79414 TG---CGTAC--TTTAT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              29999 12 -     34454 TG---CGTAC--TTTAT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17401 12 -     22428 TG---CGTAC--TTTAT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32555 12 -     47109 TG---CGTAC--TTTAT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240579 12 +   5703754 TG---CGTAC--TTTAT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10170 12 +     21866 TG---CGTAC--TTTAT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122648 12 +    313613 TT---AATAT--TTTAT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1742 12 +     11297 TT---TATAC--TTTAT
i Semnopithecus_entellus.k141_583282                     I 6 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32135 12 +     58920 TT---TATAC--TTTAT
i Semnopithecus_hypoleucos.k141_1910531                  I 6 C 0
s Semnopithecus_johnii.k141_843753                           18633 12 -     45317 TT---TATAC--TTTAT
i Semnopithecus_johnii.k141_843753                       I 6 C 0
s Semnopithecus_priam.k141_714795                            26291 12 -     42441 TT---TATAC--TTTAT
i Semnopithecus_priam.k141_714795                        I 6 C 0
s Semnopithecus_schistaceus.k141_1432920                     28967 12 -     29113 TT---TATAC--TTTAT
i Semnopithecus_schistaceus.k141_1432920                 I 6 C 0
s Semnopithecus_vetulus.k141_244474                          32055 12 -     48123 TT---TATAC--TTTAT
i Semnopithecus_vetulus.k141_244474                      I 6 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52820 12 +     77746 TT---AAGGT--TTTAT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867434 12 -   1910179 TT---AATGC--TTTAT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674642 12 +  18376816 tt---aatac--tttat
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1872233 12 +   3870691 tt---tatac--tttat
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16357 12 -     97271 TT---AATGT--TCTAT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128983 12 +    196729 TT---AATGT--TTTAT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6648258 12 +  69701581 GT---AATAT--TGTAT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       394147 12 +   1523678 TT---TATAC--TTTAT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17692 12 +     22964 TT---AATGT--TTTAT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      195091 12 +    199430 TT---AATGT--TTTAT
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    109071 12 -    539355 TT---AATGT--TTTAT
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4700 12 +      9917 TT---TATAC--TTTAT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11496 12 +     20590 TT---TATAC--TTTAT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356305 12 - 186847797 TT---TATAC--TTTAT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27922 12 -     33621 AT---CTTGT--TCTAT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22663 14 -     31044 TT---AATGCCTTTTCT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    484003 12 -    610378 TT---AATGT--TTTGC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        24044 12 +     26378 TT---TATAC--TTTAT
i Trachypithecus_auratus.k141_1189070                    I 6 C 0
s Trachypithecus_crepusculus.k141_539312                     36842 12 -     78344 TT---TATAC--TTTAT
i Trachypithecus_crepusculus.k141_539312                 I 6 C 0
s Trachypithecus_cristatus.k141_180416                       23369 12 +     25722 TT---TATAC--TTTAT
i Trachypithecus_cristatus.k141_180416                   I 6 C 0
s Trachypithecus_francoisi.k141_1453105                      31798 12 -     62838 TT---TATAC--TTTAT
i Trachypithecus_francoisi.k141_1453105                  I 6 C 0
s Trachypithecus_geei.k141_1001272                           31789 12 +     46913 TT---TATAC--TTTAT
i Trachypithecus_geei.k141_1001272                       I 6 C 0
s Trachypithecus_germaini.k141_57262                         12527 12 -     28527 TT---TATAC--TTTAT
i Trachypithecus_germaini.k141_57262                     I 6 C 0
s Trachypithecus_hatinhensis.k141_31479                      33729 12 -     64340 TT---TATAC--TTTAT
i Trachypithecus_hatinhensis.k141_31479                  I 6 C 0
s Trachypithecus_laotum.k141_928651                          31767 12 -     63452 TT---TATAC--TTTAT
i Trachypithecus_laotum.k141_928651                      I 6 C 0
s Trachypithecus_leucocephalus.k141_96450                    13218 12 +     22490 TT---TATAC--TTTAT
i Trachypithecus_leucocephalus.k141_96450                I 6 C 0
s Trachypithecus_melamera.k141_750785                         1184 12 +      9911 TT---TATAC--TTTAT
i Trachypithecus_melamera.k141_750785                    I 6 C 0
s Trachypithecus_obscurus.k141_170351                          979 12 -     33539 TT---TATAC--TTTAT
i Trachypithecus_obscurus.k141_170351                    I 6 C 0
s Trachypithecus_phayrei.ctg124                             258738 12 -   6242583 TT---TATAC--TTTAT
i Trachypithecus_phayrei.ctg124                          I 6 C 0
s Trachypithecus_pileatus.k141_2622778                        4757 12 +     19340 TT---TATAC--TTTAT
i Trachypithecus_pileatus.k141_2622778                   I 6 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177876 12 -    200418 TT---AATAT--TTTAT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485675 12 -  10818551 TT---AATAC--TTTAT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839655 12 -   4065304 TT---TATAC--TTTAC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13733 12 -     70247 TT---TATAC--TTTAC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369242 12 -  33153633 tt---aatat--tttat
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7432 12 -     21056 TT---AATGT--TTTAT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185557 12 +   5085361 TT---AATGT--TTTAT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   80375 12 +   5488506 TT---AATAT--TTTat
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108908 12 -    112863 TT---ACTGT--TTTAT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        178103 12 -    224448 TT---TATAC--TTTAT
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32559 12 -     86975 TT---AATGC--CTTAT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       4602 15 -     63895 TAAAAAATAC--CTCTT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1204 12 +      3447 TT---AATAT--TTTAT
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      10117 14 +     36723 ATCCAGGGTC--------------ATGC
s Acinonyx_jubatus.LLWD01001279.1                           816657 12 +   1699592 ttag--gGTC--------------ACAC
i Acinonyx_jubatus.LLWD01001279.1                        I 48 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     28849 14 +     63021 ACCCAGGATC--------------ACAA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419115 12 +  29979442 ATAG--TGTC--------------ACAG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            219113 12 +    347723 ATAG--GGTC--------------ACAC
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    21620 14 -     61208 ACCGAAGATT--------------ACAC
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   51063 14 +     53615 ATCCAGGGTC--------------ACAC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3091 14 +     13857 ATCCAGGGTC--------------ACAC
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19647 14 -     21945 ATCCAGGGTC--------------ACAC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21332 14 +     32033 ATCCAGGGTC--------------ACAC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74587 14 -     84148 ATATAGGGTC--------------ACAC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46841 14 -     78289 ATGTAGGGTC--------------ATAC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46257 14 +     55831 ATATAGGGTC--------------ACAC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44719 14 -     64179 ATATAGGGTC--------------ACAC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1822 14 -      3959 ATATAGGGTC--------------ACAC
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43344 14 +     45454 ATATAGGGTC--------------ACAC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              48993 14 +     70886 ATATAGGGTC--------------ACAC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11163 14 +     30854 ATATAGGGTC--------------ACAC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35299 14 +     42133 ATATAGGGTC--------------ACAC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592318 14 +   2318259 atacagggTC--------------ACAC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180726 12 -    412891 ACACGAGGTC--------------AC--
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53474 14 -     68529 ATACAGGGTC--------------ACAC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3504 14 +     17741 ATCCAGGGTC--------------ACAC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4129 14 -     15923 ATCCAGGGTC--------------ACAC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674411 14 +   5030052 ATCCAGGGTC--------------ACAC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4405 14 -     16391 ATCCAGGGTC--------------ACAC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3964 14 -     17186 ATCCAGGGTC--------------ACAC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27573 14 -     32367 ACGCATGGCT--------------GCAC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9240 12 -     15198 ACACCAGGTC--------------AC--
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               277062 14 +  21539123 ATCCAGGGTC--------------ACAC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13227 14 +     48076 ATCCAGGGTC--------------ACAC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8363 14 -     28759 ATCCAGGGTC--------------ACAC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35919 14 +     44353 ATCCAGGGTC--------------ACAC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51289 14 -     71267 ATCCAGGGTC--------------ACAC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25347 14 -     33135 ATCCAGGGTC--------------ACAC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966969 14 -  23207421 acacagGGTC--------------ACAC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3470 14 -     25979 acacagGGTC--------------ACAC
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93305 14 +    124022 ATACAAGGTC--------------ACGC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36494 14 +    288883 atacagggTC--------------ACAC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423647 14 -  48749331 atacagggTC--------------ACAC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      769248 14 +   1948126 atacagggTC--------------ACAC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559793 14 -  45695690 atacagggTC--------------ACAC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536474 14 -   4408762 atacggGGTC--------------ACAC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                  10141 14 +     28062 ATCCAGGGTC--------------ACAC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45432 14 -     91139 ATCCAGGGTC--------------ACAC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22959 14 +     95584 ATCCAGGGTC--------------ACAC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22872 14 +    119600 ATCCAGGGTC--------------ACAC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12495 14 +     18648 ATCCAGGGTC--------------ACAC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             11998 14 -     13885 ATCCAGGGTC--------------ACGC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            4209 14 -      8861 ATCCAGGGTC--------------ACAC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456551 14 + 189096842 ATCCAGGGTC--------------ACAC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               4125 14 +      8664 ATCCAGGGTC--------------ACAC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7635013 14 +  17673402 acacaggGTC--------------ACAC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4669314 14 +   7040546 acacaggGTC--------------ACAC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1213012 14 +   1652518 acacaggGTC--------------ACAC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42509053 12 +  60362399 AAAG--GGTC--------------ACAT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12688 12 -     23171 AAAG--GGTC--------------ACAT
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          226029 12 +   9314153 AAAG--GGTC--------------ACAT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41619166 12 +  59632846 AAAG--GGTC--------------ACAT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110747 12 -  63665305 AAAG--GGTC--------------ACAT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416322 14 -  46296322 atacagggTC--------------ACAC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598319 14 +  44709034 atacaggGTC--------------ACAC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2230 14 -     20114 ATATTCGAAC--------------ACAG
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274521 14 +    496798 ACACTGGGTC--------------TCAC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               4113 12 +      9923 ACACGAGGTC--------------AC--
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31603 13 -     39886 ACACAGGGTC--------------ACA-
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83322 14 -    217609 ACACATGGTC--------------ACAC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              5000200 14 +  23392119 ATAGATAAAT--------------ACAC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5003641 14 +  23407841 ATAGATAAAT--------------ACAC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          526 14 -    143979 ATAGATAAAT--------------ACAC
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_niveiventris.k141_592277                           7466 14 -     12580 ATCCAGGGTC--------------ACAC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45575 14 +     53515 ATCCAGGGTC--------------ACAT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376201 14 -  26074798 ATCCAGGGTT--------------GCAC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10270 14 -     34880 ATCCAGGGTT--------------GCAC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69368 14 -     89041 ATCCAGGGTT--------------GCAT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2184 14 -     76265 ATACTGGGCC--------------TCAC
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495643 14 -  27778364 ACACAGGGTC--------------ACAT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22476 14 +     27315 ACACAGGGTC--------------ACAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                144147 14 -   4669795 ATCCAGGGTC--------------ACAC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                          121 14 +      3297 ATCCAGGGTC--------------ACAC
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3319 14 -     14410 ATCCAGGGTC--------------ACAC
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47701 14 -    148725 ATCCAGGGTC--------------ACAC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29978 14 -     40656 ATCCAGGGTC--------------ACAC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9937 14 +     20796 ATCCAGGGTC--------------ACAC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            15051 14 -     17524 ATCCAGGGTC--------------ACAC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30784 14 -     34525 ATCCAGGGTC--------------ACAC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14562 14 -     25376 ATCCAGGGTC--------------ACAC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367151 14 -  39242232 ATCCAGGGTC--------------ACAC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272876 14 +  21565898 ATCCAGGGTC--------------ACAC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35243 14 -     45857 ATCCAGGGTC--------------ATAC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30144 14 -     32606 ATCCAGGGTC--------------ACAC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6299 14 +      8499 ATCCAGGGTC--------------ACAC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28704 14 +     70610 ATCCAGGGTC--------------ACAC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25666 14 +     36323 ATCCAGGGTC--------------ACAC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15568 14 -     19938 ATACAGGGTC--------------ACAT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            11235 14 -     32913 ATCCAGGGCC--------------ACAC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21648 14 -     40346 ATCCAGGGCC--------------ACAC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21902 14 +    216457 ATCCAGGGCC--------------ACAC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21692 14 +     39636 ATCCAGGGCC--------------ACAC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33784 14 -     52013 ATCCAGGGTC--------------ACAC
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44772 14 -    112038 ATCCAGGGTC--------------ACAC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10322 14 +     34062 ATCCAGGGTC--------------ACAC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346566 14 +  18827391 ATCCAGGGTC--------------ACAC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13105 14 -     44032 ATCCAGGGTC--------------ACAC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307952 14 - 135778131 ATCCAGGGTC--------------ACAC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2244 14 +     10270 ACATGGGATC--------------ACAT
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            609721 14 -    839153 ACATGGGATC--------------ACAT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2490 14 -      4087 ACACCAGGCC--------------ACAC
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412361 14 -   2368649 ATCCAGGGTC--------------ACAC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382243 14 - 200372422 ATCCAGGGTC--------------ACAC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5796 14 -     84244 ATCCAGGGTC--------------ACAC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810823 14 +  53390261 ATAAAGGGTC--------------CTAC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6392 14 -      8242 ATACAGGGTC--------------ACAC
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47542 14 -     83289 ACCTAGAACC--------------ACAA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213119060 14 - 224834208 ATCCAGGACC--------------ACAA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              7996 12 +     87169 ATAG--GGTC--------------ACAC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650279 14 -   1526836 ACTCATGATC--------------ACGT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22903 14 +     50838 ATATTTGAAC--------------ACAG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12391 14 +     36344 ATGTATGAGC--------------ACAC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31831 14 +     75252 ATAGATGAGC--------------ACAG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2113312 14 -   2246927 AGATGGGGTC--------------GCCT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635381 14 -  35494412 acacagGGTC--------------ACAC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11869106 12 -  20541912 ACACGAGGTC--------------AC--
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667914 14 -   1390856 ACACAGGGTC--------------ACAT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142719 14 -    198055 ACACAGGGTC--------------ACAT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955401 13 -  37912305 ATTCAAGGGC--------------ATA-
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                   1013 13 +     14058 ATTCAAGGGC--------------ATA-
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 12964 14 +     14636 ATAGATAAGC--------------ATAC
i Dolichotis_patagonum.DolPat_scaffold_80628             C 0 I 26
s Echinops_telfairi.JH980293.1                            62858601 14 - 111700974 ACACAGGGCT--------------ACAC
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9789 14 +     19438 ATACAGGGTC--------------ACAC
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       246108 14 -    607251 atacagggTC--------------ACAC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9113640 14 -  10337057 ACACAGGATC--------------ACAC
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35265 14 +    110024 aatcagGACC--------------TCAA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           17186 14 +     18970 AATCAGGACC--------------TCAA
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925647 12 +  41312741 TTAG--GGTC--------------ACAT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582875 14 +  14770903 acacaaggtc--------------acac
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045382 14 -   4378816 ACACACGGTC--------------ACAC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379312 14 +  39960074 ACACACGGTC--------------ACAC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415294 14 -    498745 ACACACGGTC--------------ACAC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671591  8 +   7059049 ------AGTC--------------ATAC
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               266094 14 +  21539334 ATCCAGGGTC--------------ACAC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74584 14 -    133382 ACACAGGGTC--------------ACAC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2306 14 +     25849 ACACAGGGTC--------------ACAC
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250735 12 - 206538554 ttag--gGTC--------------ACAC
i Felis_catus.CM001381.2                                 I 124 C 0
s Felis_catus_fca126.CM031415.1                          185120691 12 - 205367284 ttag--gGTC--------------ACAC
i Felis_catus_fca126.CM031415.1                          I 124 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  1333 12 +     25330 TTAG--GGTC--------------ACAC
i Felis_nigripes.FelNig_flattened_line_44075             I 124 C 0
s Fukomys_damarensis.KN121974.1                            2926193 14 -   3816255 ATACATGAGC--------------ACAC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                5180 14 -     28519 ACACAGAGTC--------------ACAC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2366 14 +    660261 atacagggTC--------------ACAC
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            5194 14 -      6791 ACACATGGTC--------------ATGT
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                870 14 -      2763 ATCCAGGGTC--------------ATAC
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                259290 14 - 186649187 ATCCAGGGTC--------------ATAC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    7110 14 -     78134 ACACATGGCC--------------ATTC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34369 11 -    327341 ATAG---GTC--------------ACAC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 16033 14 +     48891 ATACAGGGTC--------------ACAC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938624 20 -  22651954 ATACATGAGTA-T---A--TA--TACAC
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6351 14 +      8654 ACACAGGGCC--------------ACAC
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11419 14 -     36432 ACACAGGGTC--------------ACAC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                      1556464 14 -   1711038 NNNNNNNNN------------NNN--NN
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                187 14 -      8370 ACACAGGATC--------------ACAC
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145753 14 -    630532 ATCCAGGGTC--------------ACAC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  74031 12 +     83186 ATAG--AGTC--------------ACAC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75568 14 +    143317 ATAGATGAGC--------------ACAC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               8800 14 +     12352 ATCCAGGGTC--------------ATAC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              15987 14 +     55766 ATCCAGGGTC--------------ATAC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055515 14 + 191637585 ATCCAGGGTC--------------ATAC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804393 14 +  11177569 ATCCAGGGTC--------------ATAC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11433 14 -    135385 ACAGATGAGC--------------ACAA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390682 14 +   7955117 atttatggTT--------------GCAC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13485 14 -     16823 ACACAGGGTC--------------ACAC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1243167 14 +   9596543 acccaaggtc--------------acac
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75323 14 -     97402 ACACAGGGTC--------------ACAC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45609 14 +    110728 ATCCAGGGTC--------------ACAC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1562 14 -     25587 ACACAAGGTC--------------ATAC
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                        1054 14 -     23187 ATCCAGGGTC--------------ACAC
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1368 14 -     14280 ATCCAGGGTC--------------ACAC
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                        1008 14 +      3713 ATCCAGGGTC--------------ACAC
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1194 14 +      8855 ATCCAGGGTC--------------ACAC
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         5995 14 -     13645 ATCCAGGGTC--------------ACAC
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816916 12 -   3914936 ATAG--GGTC--------------ACAC
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     23182 13 +     24238 GTACAGGGTA--------------AT-T
i Lepus_americanus.LepAme_scaffold_56121                 I 1075 C 0
s Lipotes_vexillifer.KE559953.1                             344667 14 +    662738 acacagGGTC--------------ACAC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               337024 14 -   1826925 ATCCAGGGTC--------------ACAC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39088089 14 +  43346337 ACAGAGGGCC--------------ACAC
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618321 12 +  59628241 AAAG--GGTC--------------ACAT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48421 14 -     61512 ATCCAGGGTC--------------ACAC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 376083 14 -  60120075 ATCCAGGGTC--------------ACAC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28351 14 +     30207 ATCCAGGGTC--------------ACAC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3189 14 -      5035 ATCCAGGGTC--------------ACAC
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28304 14 +     30527 ATCCAGGGTC--------------ACAC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39480 14 -     50087 ATCCAGGGTC--------------ACAC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49225 14 +     51645 ATCCAGGGTC--------------ACAC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418427 14 - 187317192 ATCCAGGGTC--------------ACAC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402658 14 +  25927173 ATCCAGGGTC--------------ACAC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51829 14 -     62418 ATCCAGGGTC--------------ACAC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4360 14 +     14901 ATCCAGGGTC--------------ACAC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48302 14 +     59329 ATCCAGGGTC--------------ACAC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274209 14 +    668171 ATCCAGGGTC--------------ACAC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2841 14 -      5049 ATCCAGGGTC--------------ACAC
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 6008 14 +     17132 ATCCAGGGTC--------------ACAC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226762 14 -    270270 ATACAGGGTT--------------CCAC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325491 14 +  24302211 ATCCAGGGTC--------------ACAC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360322 14 -    752769 ATCCAGGGTC--------------ACAC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676944 12 -    737560 ACAC--AGTC--------------ACGC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             224240 12 +    317179 ACAC--AGTC--------------ACAC
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504882 14 +  40650429 attcatGGTT--------------GCAC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       154082 14 +    207569 ACATGGGGTC--------------ACAC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29659 12 -     74585 ATAG--GGTC--------------ACAC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53244 14 -    140813 ACCCAGGATC--------------ACAA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90951 14 +     93471 ACACAGGGTC--------------ACAC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12604 14 +     17804 ATCCAGGGTC--------------ACAC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                331 14 +      5551 ATCCAGGGTC--------------ACAC
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21415 14 -     26561 ATCCAGGGTC--------------ACAC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49782 14 +    145209 ACACGGGGCT--------------ACGC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188685 12 +    200668 ACGTGAGGTC--------------AC--
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966673 14 +  27267610 ACTCAGGATC--------------TCAA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368503 14 -   8254450 aaacaaggtc--------------acac
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46234 14 -     48117 AAACAAGGTC--------------ACAC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25590 14 -     27822 ATCCAGGGTC--------------ACAC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12149 12 +     27589 ATAG--GGTC--------------ACAC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   363059 14 +    437263 ACACAGGGTC--------------ACAC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183128 14 +    366855 TCACGAGGTC--------------ACAC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32264 14 -     82753 ATACAGGGTC--------------ACAC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   22119 11 -     63510 ATAG---GTC--------------ACAC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45491 14 +     47283 ACACAAGGTC--------------ACAC
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35597866 12 + 120012414 ACCCAGGATC----------------AA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41691406 14 + 129401213 ACCCAGGATC--------------ACAA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58219365 14 +  89631738 ACCCAGGATC--------------ACAA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39500325 14 + 130317789 ACCCAGGATC--------------ACAA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3206 14 -    124358 ATACATGGCC--------------ATGC
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358535 12 +  14710649 ATAG--GGTC--------------ACAC
i Mustela_putorius.JH418006.1                            C 0 I 74
s Myocastor_coypus.MyoCoy_scaffold_57531                      1288 14 -     27262 ATATTCAAAC--------------ACAG
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797496 14 +  10118263 acacaaggtc--------------acac
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391670 14 +   6019432 ACACAGGGTC--------------ACAC
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387709 14 +   4330536 acacaaggtc--------------acac
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6496 14 +     18357 ACACAAGGTC--------------ACAC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950260 14 +   3037898 ACCCAGGATC--------------ACAC
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              32375 14 +     34575 ATCCAGGGTC--------------ACAC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469596 12 -  31847680 ATAG--GGTC--------------ACAC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235717 14 -   7148211 acacagGGTC--------------ACAC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131408 14 -    149072 ACGCGAGGTC--------------ACCT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56688 14 -    132029 ATCCAGGGTC--------------ATAC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12783 14 -     16345 ATCCAGGGTC--------------ATAC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18672 14 +     22201 ATCCAGGGTC--------------ATAC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416902 14 -  22158432 ATCCAGGGTC--------------ATAC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29077 14 -     54323 ATCCAGGGTC--------------ATAC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                202026 12 +   9404916 AAAG--GGTC--------------ACAT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059562 14 -  11899542 GTATTTGAAC--------------ACAG
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1455365 12 +   2017862 ATAG--GATC--------------ACAC
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442660 14 -    630418 atacagGGTC--------------ACAC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22317 14 +    150152 atacagggTC--------------ACAC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97289 14 -    140218 ACCCAGGACC--------------TCAA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7832 14 -     41509 ACTCAGGACC--------------ACAG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8106130 14 +  10937097 acatagggTC--------------ACAC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3120 14 +     11607 ACACAGGGGC--------------ACAC
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107109471 13 - 174332312 ATACAGGGTA--------------AT-C
i Oryctolagus_cuniculus.CM000791.1                       I 703 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        42976 12 +    559221 AAAG--GGTC--------------ACAT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26411059 14 -  44047080 atacagggTC--------------ACAC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11682 14 +     17875 ATACAGGGTC--------------ACAC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  649 14 +      1186 ATCCAGGGTC--------------ATAC
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1477269 14 - 189151597 ATCCAGGGTC--------------ATAC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   28665 12 -    230217 TTAG--GGTC--------------ACAC
i Panthera_onca.PanOnc_flattened_line_3271               I 48 C 0
s Panthera_pardus.KV860321.1                              18465906 12 -  18783137 ttag--gGTC--------------ACAC
i Panthera_pardus.KV860321.1                             I 57 C 0
s Panthera_tigris.KE722367.1                               3976505 12 +   8748460 ttag--gGTC--------------ACAC
i Panthera_tigris.KE722367.1                             I 55 C 0
s Pantholops_hodgsonii.KE114653.1                          1622577 14 +   2937107 atacagggTC--------------ACAC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246506 14 - 183742232 ATCCAGGGTC--------------ACAC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12791 14 +     21308 ATCCAGGGTC--------------ACAC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295534 14 -  20919399 ATCCAGGGTC--------------ACAC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25433 14 -     27687 ATCCAGGGTC--------------ACAC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2110 14 +     10553 ATCCAGGGTC--------------ACAC
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  2071 14 -     10386 ATCCAGGGTC--------------ACAC
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18786 12 +     78924 ATAG--GGTC--------------ACAC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7611 13 +      9367 ATTCAAGGCC--------------ACA-
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         251049 14 +  18517816 ACTCAGGACC--------------ACAA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35619 14 -     56120 GTACATGAAC--------------ACAC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7651 14 -     63832 ACACAGGGTC--------------ACAC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5756 14 +     55023 ATCCAGGGTC--------------ACAC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5279 14 -     89929 ATCCAGGGTC--------------ACAC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5867 14 +     40849 ATCCAGGGTC--------------ACAC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257596 14 +  14605196 ATCCAGGGTC--------------ACAC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             7986 14 +     22231 ACACAAGGTC--------------ACAC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             67121 14 +    207309 ATCCAGGGTC--------------ACAC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8216 14 -     25401 ATCCAGGGTC--------------ACAC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33962 14 +     58159 ATCCAGGGTC--------------ACAC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34238 14 +     63561 ATCCAGGGTC--------------ACAC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           33993 14 +     51148 ATCCAGGGTC--------------ACAC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558969 14 -   4542175 ATCCAGGGTC--------------ACAC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33977 14 +     51125 ATCCAGGGTC--------------ACAC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4899 14 +     19503 ACACAGGGTC--------------ACAC
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10409 14 +     39866 ATCCAGGGCC--------------ACAC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5491 14 -      9282 ATCCAGGGCC--------------ACAC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44895 14 -     87950 ATCCAGGGCC--------------ACAC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45289 14 -     88961 ATCCAGGGCC--------------ACAC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                          9987 14 -     39403 ATCCAGGGCC--------------ACAC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44939 14 +     87928 ATCCAGGGCC--------------ACAC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                          9986 14 -     60166 ATCCAGGGCC--------------ACAC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16907 14 -     67232 ATCCAGGGCC--------------ACAC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44839 14 -     90634 ATCCAGGGCC--------------ACAC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46306 14 +     89403 ATCCAGGGCC--------------ACAC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182450 14 - 189387572 atcCAGGGTC--------------ATAC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197192 14 -   9816681 ATCCAGGGTC--------------ATAC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30954 14 +     69807 ATCCAGGGTC--------------ACAC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48137 14 -     80239 ATCCAGGGTC--------------ACAC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2883 14 -     12774 ACACAGGGCC--------------ACAC
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Psammomys_obesus.NESX01036366.1                            40777 14 +     52041 ACCCAGGATC--------------ACAA
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55766 14 -     66298 ACATGAGGTC--------------ACAC
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8144 12 -     18639 ATAG--GGTC--------------ACAT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844339 14 -  28871421 ATACAGGGTC--------------ACAC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540855 14 -   4952924 ATACAGGGTC--------------ACAC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102897 12 +  38429054 ttag--gGTC--------------ACAC
i Puma_concolor.QAVW01001104.1                           I 62 C 0
s Pygathrix_cinerea.k141_1153803                             30323 14 +     91421 ATCCAGGGTC--------------ACAC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156874 14 -   7812017 ATCCAGGGTC--------------ACAC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11174 14 +     72585 ATCCAGGGTC--------------ACAC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5178 14 -     55207 ATACAGGGTC--------------ACAC
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37025985 13 -  90668790 AC-CACGATC--------------ACAA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918236 14 +   3329780 acaCTGAGTC--------------ACAC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4780 14 +      7119 ATCCAGGGTC--------------ACAC
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125450 14 + 195417433 ATCCAGGGTC--------------ACAC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239622 14 -   7961872 ATCCAGGGTC--------------ACAC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79085 14 -    116970 ATACAGGGTC--------------ACAC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9681 14 +     12412 ATCCAGGGTC--------------ACAC
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                              1003 14 +      9876 ATCCAGGGTC--------------ACAC
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16599 14 -     24931 ATCCAGGGTC--------------ACAC
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1478 14 +      4564 ATCCAGGGTC--------------ACAC
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4283 14 -      7443 ATCCAGGGTC--------------ACAC
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395316 14 - 209938924 ATCCAGGGTC--------------ACAC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1900 14 +     10149 ATCCAGGGTC--------------ACAC
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1244 14 +     10417 ATCCAGGGTC--------------ACAC
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14629 14 +     16473 ATACAGGGTC--------------ACAC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111368 14 + 121099817 ATCCAGGGTC--------------ACAC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32937 14 -     47369 ATCCAGGGTC--------------ACAC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33320 14 -     79414 ATCCAGGGTC--------------ACAC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              30011 14 -     34454 ATCCAGGGTC--------------ACAC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17413 14 -     22428 ATCCAGGGTC--------------ACAC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32567 14 -     47109 ATCCAGGGTC--------------ACAC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240591 14 +   5703754 ATCCAGGGTT--------------GTAC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10182 14 +     21866 ATCCAGGGTT--------------GTAC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122660 28 +    313613 ACACACATTCAATTCTAGATACACTAGC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1754 14 +     11297 ATCCAGGGTC--------------ACAC
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32147 14 +     58920 ATCCAGGGTC--------------ACAC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18645 14 -     45317 ATCCAGGGTC--------------ACAC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26303 14 -     42441 ATCCAGGGTC--------------ACAC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28979 14 -     29113 ATCCAGGGTC--------------ACAC
i Semnopithecus_schistaceus.k141_1432920                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          32067 14 -     48123 ATCCAGGGTC--------------ACAC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52832 14 +     77746 ACCCATGACC--------------ACAA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867446 14 -   1910179 ACACAATGTC--------------CAAC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674654 14 +  18376816 acacaggatt--------------gaac
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1872245 14 +   3870691 attcatGGTT--------------GCAC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16369  7 -     97271 ATAG--GGT-------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             128995 11 +    196729 ATAG---GTC--------------ACAC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6648270 14 +  69701581 ACACAGGGTC--------------ACAC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       394159 14 +   1523678 ATCCAGAGTC--------------ATAC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17704 14 +     22964 ACACAAGGTC--------------ACAC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      195103 14 +    199430 ACACAGGGTC--------------ACAC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    109083 14 -    539355 ACACAGGGTC--------------ACAC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4712 14 +      9917 ACACTGGGCT--------------TCAC
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11508 14 +     20590 ACACTGGGCT--------------TCAC
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356317 14 - 186847797 ATCCAGGGTC--------------ACAC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27934 14 -     33621 GTACATGAGC--------------ACAC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22677 14 -     31044 ATACAGGGTC--------------ACAT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    484015 12 -    610378 ACACGAGGTC--------------AC--
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        24056 14 +     26378 ATCCAGGGTC--------------ACAC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36854 14 -     78344 ATCCAGGGTC--------------ACAC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23381 14 +     25722 ATCCAGGGTC--------------ACAC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31810 14 -     62838 ATCCAGGGTC--------------ACAC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31801 14 +     46913 ATCCAGGGTC--------------ACAC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12539 14 -     28527 ATCCAGGGTC--------------ACAC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33741 14 -     64340 ATCCAGGGTC--------------ACAC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31779 14 -     63452 ATCCAGGGTC--------------ACAC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13230 14 +     22490 ATCCAGGGTC--------------ACAC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1196 14 +      9911 ATCCAGGGTC--------------ACAC
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                          991 14 -     33539 ATCCAGGGTC--------------ACAC
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258750 14 -   6242583 ATCCAGGGTC--------------ACAC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4769 14 +     19340 ATCCAGGGTC--------------ACAC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177888 13 -    200418 GTACAGGGTC--------------ACA-
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485687 14 -  10818551 ACACAGGGCC--------------ACAC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839667 14 -   4065304 ACGTAGGGTC--------------ATAC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      13745 14 -     70247 ACGTAGGGTC--------------ATAC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369254 14 -  33153633 acatagggtC--------------ACGC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7444 14 -     21056 ACACAGGTTC--------------TCAT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185569 12 +   5085361 ATAG--GGTC--------------ACAG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   80387 14 +   5488506 acccagggtc--------------acac
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108920 12 -    112863 AAAG--GGTC--------------ACAT
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        178115 14 -    224448 ATTCATGTTT--------------GCAC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32571 12 -     86975 ATAG--GATC--------------ACAC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       4617 14 -     63895 ACCCAAGGTC--------------ATGT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1216 14 +      3447 ACACAGGGTC--------------ACAC
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      10131 26 +     36723 AGTCAATTT--TAGA--CATTTTAAAA-A--AT
s Acinonyx_jubatus.LLWD01001279.1                           816669 25 +   1699592 AAATAATTC--TAGGCACATT---AAG-A--AC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 3
s Acomys_cahirinus.AcoCah_scaffold_21377                     28863 25 +     63021 AGTCAATGC--AAAGTATATT---AAA-A--AC
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419127 25 +  29979442 GGTCAATTC--TATACACATT---AAA-A--AC
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 3
s Ailurus_fulgens.LNAC01001112.1                            219125 25 +    347723 GGTCAATTC--TGTACACATT---AAA-A--AC
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 3
s Allactaga_bullata.AllBul_scaffold_20030                    21634 25 -     61208 AGTTAATTC--TATATATATT---AAA-A--AA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 3
s Allenopithecus_nigroviridis.k141_3755588                   51077 28 +     53615 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3105 28 +     13857 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19661 28 -     21945 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21346 28 +     32033 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74601 28 -     84148 AGTCAACTT--TAGACGTATTTTTAAA-A--AT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46855 28 -     78289 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46271 28 +     55831 AGTCAATTT--TAGACGTATTTTTAAA-A--AT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44733 28 -     64179 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1836 28 -      3959 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43358 28 +     45454 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              49007 28 +     70886 AGTCAATTT--TAGACATATTTTTAAG-A--AT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11177 28 +     30854 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35313 28 +     42133 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592332 25 +   2318259 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 3
s Anoura_caudifer.AnoCau_scaffold_1412                      180738 25 -    412891 AGTCAATTC--TAGACACATT---AAA-A--AT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_21030             53488 25 -     68529 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 3
s Aotus_azarae.k141_887050                                    3518 28 +     17741 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4143 28 -     15923 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674425 28 +   5030052 AGTCAattt--tagacatatttttaaa-a--at
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4419 28 -     16391 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               3978 28 -     17186 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27587 24 -     32367 TCGCAATTC--TAGACAGTCC---G-A-A--GC
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9252 25 -     15198 AGTCAATTC--TAGGCACATT---AGA-A--CC
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 3
s Ateles_geoffroyi_b.tarseq_1536                               277076 28 +  21539123 AGTCAATTT--TAGACATATTTTTTAA-A--AT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13241 28 +     48076 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8377 28 -     28759 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35933 28 +     44353 AGTCAATTT--TAGACATATTTTTTAA-A--AT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51303 28 -     71267 AGTCAATTT--TAGACATATTTTTTAA-A--AT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25361 28 -     33135 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7966983 25 -  23207421 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 3
s Balaenoptera_bonaerensis.DF411050.1                         3484 25 -     25979 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 3
s Beatragus_hunteri.BeaHun_scaffold_7278                     93319 25 +    124022 AGTCAATTC--TAGACTCGTT---AAA-A--AC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 3
s Bison_bison.KN261452.1                                     36508 25 +    288883 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Bison_bison.KN261452.1                                 C 0 I 3
s Bos_indicus.CM003047.1                                  28423661 25 -  48749331 AGTCAATTC--TAGANTCATT---AAA-A--AC
i Bos_indicus.CM003047.1                                 C 0 I 3
s Bos_mutus.JH880303.1                                      769262 25 +   1948126 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Bos_mutus.JH880303.1                                   C 0 I 3
s Bos_taurus.CM000203.6                                   27559807 25 -  45695690 AGTCAATTC--TAGAGTCATT---AAA-A--AC
i Bos_taurus.CM000203.6                                  C 0 I 3
s Bubalus_bubalis.KI419123.1                               1536488 25 -   4408762 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Bubalus_bubalis.KI419123.1                             C 0 I 3
s Cacajao_ayresi.k141_96119                                  10155 28 +     28062 AGTCAATTT--TAGATATATTTTTAAA-A--CT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45446 28 -     91139 AGTCAATTT--TAGATATATTTTTAAA-A--CT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  22973 28 +     95584 AGTCAATTT--TAGATATATTTTTAAA-A--CT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22886 28 +    119600 AGTCAATTT--TAGATATATTTTTAAA-A--CT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12509 28 +     18648 GGTCAATTT--TAGACATACTTTTAGG-A--AT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             12012 28 -     13885 AGTCAATTT--TAGACATATTTTTAGA-A--AT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            4223 28 -      8861 GGTCAATTT--TAGACATATTTTTAGG-A--AT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456565 28 + 189096842 GGTCAATTT--TAGACATATTTTTAGG-A--AT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               4139 28 +      8664 GGTCAATTT--TAGACATATTTTTAGG-A--AT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7635027 25 +  17673402 AGTCAATTC--TAGGCTCATT---AAA-A--AC
i Camelus_bactrianus.KN276810.1                          C 0 I 3
s Camelus_dromedarius.KN272107.1                           4669328 25 +   7040546 AGTCAATTC--TAGGCTCATT---AAA-A--AC
i Camelus_dromedarius.KN272107.1                         C 0 I 3
s Camelus_ferus.KB017975.1                                 1213026 25 +   1652518 AGTCAATTC--TAGGCTCATT---AAA-A--AC
i Camelus_ferus.KB017975.1                               C 0 I 3
s CanFam4.chr16                                           42509065 25 +  60362399 GATCAATTC--TAGACACATT---AAA-A--AC
i CanFam4.chr16                                          C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12700 25 -     23171 GATCAATTC--TAGACACATT---AAA-A--AC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 3
s Canis_lupus_dingo.QKWQ01000480.1                          226041 25 +   9314153 GATCAATTC--TAGACACATT---AAA-A--AC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 3
s Canis_lupus_familiaris.chr16                            41619178 25 +  59632846 GATCAATTC--TAGACACATT---AAA-A--AC
i Canis_lupus_familiaris.chr16                           C 0 I 3
s Canis_lupus_orion.HG994398.1                            45110759 25 -  63665305 GATCAATTC--TAGACACATT---AAA-A--AC
i Canis_lupus_orion.HG994398.1                           C 0 I 3
s Capra_aegagrus.CM003241.1                               27416336 25 -  46296322 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Capra_aegagrus.CM003241.1                              C 0 I 3
s Capra_hircus.CM004588.1                                 26598333 25 +  44709034 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Capra_hircus.CM004588.1                                C 0 I 3
s Capromys_pilorides.CapPil_scaffold_26391                    2244 25 -     20114 AGTCAAT--TATAGATACATT---AAA-A--AT
i Capromys_pilorides.CapPil_scaffold_26391               C 0 I 3
s Carlito_syrichta.NW_007259797.1                           274535 19 +    496798 AGTCAGTCC--TAGACATCTT------------
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_107871               4125 25 +      9923 AGTCAATTG--TAGACACATT---AAA-A--CC
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 3
s Castor_canadensis.CasCan_scaffold_39952                    31616 25 -     39886 AGTCAATTC--TAGATATATT---AAA-A--AC
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 3
s Catagonus_wagneri.CatWag_scaffold_2839                     83336 25 -    217609 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 3
s Cavia_aperea.AVPZ01000300.1                              5000214 23 +  23392119 AGTCACA----CGAGCACAtt---aaa-a--ac
i Cavia_aperea.AVPZ01000300.1                            C 0 I 3
s Cavia_porcellus.DS562891.1                               5003655 23 +  23407841 AGTCACA----CGAGCACATT---AAA-A--ac
i Cavia_porcellus.DS562891.1                             C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_8919                          540 23 -    143979 AGTCACA----CGAGCACATT---AAA-A--AC
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 3
s Cebuella_niveiventris.k141_592277                           7480 28 -     12580 GGTCAATTT--TAGACATACTTTTAGG-A--AT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45589 28 +     53515 GGTCAATTT--TAGACATACTTTTAGG-A--AT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376215 28 -  26074798 AGTCAATTT--TAGACATCTTTTTAAA-A--AT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10284 28 -     34880 AGTCAATTT--TAGACATCTTTTTAAA-A--AT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69382 28 -     89041 AGTCAATTT--TAGACATCTTTTTAAA-A--AT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2198 19 -     76265 AGTCAGTCC--TAGACATCTT------------
i Cephalopachus_bancanus.k141_1140705                    C 0 I 1
s Ceratotherium_simum.JH767749.1                          15495657 25 -  27778364 AGTCAATTC--TAGACACGTT---AAA-A--AC
i Ceratotherium_simum.JH767749.1                         C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22490 25 +     27315 AGTCAATTC--TAGACACGTT---AAA-A--AC
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 3
s Cercocebus_atys.KQ010504.1                                144161 28 -   4669795 AGTCAattt--tagacatatttttaaa-a--at
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                          135 28 +      3297 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3333 28 -     14410 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47715 28 -    148725 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        29992 28 -     40656 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9951 28 +     20796 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            15065 28 -     17524 AGTCAATTT--TAGACGTATTTTTAGA-A--AT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30798 28 -     34525 AGTCAATTT--TAGACGTATTTTTAAA-A--AT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14576 28 -     25376 AGTCAATTT--TAGACGTATTTTTAAA-A--AT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367165 28 -  39242232 AGTCAATTT--TAGACGTATTTTTAAA-A--AT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272890 28 +  21565898 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35257 28 -     45857 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30158 28 -     32606 AGTCAATTT--TAGACGTATTTTTAAA-A--AT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6313 28 +      8499 AGTCAATTT--TAGACGTATTTTTAAA-A--AT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28718 28 +     70610 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25680 28 +     36323 AGTCAATTT--TAGACGTATTTTTAAA-A--AT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15582 25 -     19938 AGTCAATCC--TGGACATACC---AAA-C--GC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 3
s Cheracebus_lucifer.k141_2312002                            11249 28 -     32913 CGTCAATTT--TAGACATATTTTTAAA-A--AT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21662 28 -     40346 CGTCAATTT--TAGACATATTTTTTAA-A--AT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21916 28 +    216457 CGTCAATTT--TAGACATATTTTTAAA-A--AT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21706 28 +     39636 CGTCAATTT--TAGACATATTTTTAAA-A--AT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33798 28 -     52013 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44786 28 -    112038 AGTCAATTT--TAGATATATTTTTAAA-A--CT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10336 28 +     34062 AGTCAATTT--TAGATATATTTTTAAA-A--CT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346580 28 +  18827391 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13119 28 -     44032 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307966 28 - 135778131 AGTCAattt--tagacatatttttaaa-a--at
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2258 25 +     10270 AGTCAATCC--TGTACATATT---AAA-A--GC
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 I 3
s Choloepus_hoffmanni.KN194906.1                            609735 25 -    839153 AGTCAATCC--CGTACATATT---AAA-A--GC
i Choloepus_hoffmanni.KN194906.1                         C 0 I 3
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2504 25 -      4087 AGTCAATTG--CAGACACATT---AAA-A--AT
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 I 3
s Colobus_angolensis.KN981557.1                             412375 27 -   2368649 AGTCAATTT--tagacatctttttaaa-a---t
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382257 27 - 200372422 AGTCAATTT--TAGACATCTTTTTAAA-A---T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5810 27 -     84244 AGTCAATTT--TAGACATCTTTTTAAA-A---T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810837 25 +  53390261 AATTAATTC--TAGACACATT---AAA-A--AC
i Condylura_cristata.JH655891.1                          C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6406 25 -      8242 AGTCAATTG--TAGACACATT---AAA-A--AC
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 3
s Cricetomys_gambianus.CriGam_scaffold_14425                 47556 25 -     83289 AGTCACTTC--CATATATATT---AAA-A--AT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 3
s Cricetulus_griseus.LT883664.1                          213119074 25 - 224834208 ATTCAATTC--CAACTATATT---AA-AA--GC
i Cricetulus_griseus.LT883664.1                          C 0 I 3
s Crocidura_indochinensis.CroInd_scaffold_205242                 2 19 +      5812 ------GTC--TAAACACATT---AAA-A--GG
i Crocidura_indochinensis.CroInd_scaffold_205242         N 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_16129              8008 25 +     87169 AGACAGTTC--TAGGCACATT---AAG-A--AC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 3
s Ctenodactylus_gundi.CteGun_scaffold_65                    650293 25 -   1526836 AGTCAATTC--TAGATATATC---AAA-A--AT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 8
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22917 24 +     50838 AGTCAAT--TCTAGGTAGAT----AGA-A--AT
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 3
s Cuniculus_paca.CunPac_flattened_line_7025                  12405 25 +     36344 AGTCAAT--TCTAGATACATT---AAA-A--AC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 3
s Dasyprocta_punctata.DasPun_flattened_line_15900            31845 25 +     75252 AATCAAT--TCTAGATACATA---AAA-A--AC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 3
s Dasypus_novemcinctus.JH564415.1                          2113326 24 -   2246927 CG-CAGTCC--TGGATGTACT---GGA-A--GC
i Dasypus_novemcinctus.JH564415.1                        C 0 I 3
s Delphinapterus_leucas.KZ290073.1                        18635395 25 -  35494412 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Delphinapterus_leucas.KZ290073.1                       C 0 I 3
s Desmodus_rotundus.KZ672289.1                            11869118 25 -  20541912 AGCCAATTG--TAGACCCATT---AAA-A--AC
i Desmodus_rotundus.KZ672289.1                           C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667928 25 -   1390856 AGTCAATTC--TAGACACATT---AAA-A--AC
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_5955                  142733 25 -    198055 AGTCAATTC--TAGACACGTT---AAA-A--AC
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 3
s Dipodomys_ordii.KN672350.1                              18955414 25 -  37912305 AGTCAATTG--TCGATATCTT---AGA-A--TT
i Dipodomys_ordii.KN672350.1                             C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_77284                   1026 24 +     14058 AGTCAATTG--TCGATATCTT---AGA-A--T-
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_341948                   12 23 -      1676 AGTCACA----TGAGCACATT---AAA-A--AC
i Dolichotis_patagonum.DolPat_scaffold_341948            n 26 I 20
s Echinops_telfairi.JH980293.1                            62858615 25 - 111700974 AGTCAGTTG--TAGACACACT---AAG-A--GC
i Echinops_telfairi.JH980293.1                           C 0 I 3
s Eidolon_helvum.AWHC01266696.1                               9803 25 +     19438 AGTCAATTC--TAGACACATT---AAA-A--AC
i Eidolon_helvum.AWHC01266696.1                          C 0 I 3
s Elaphurus_davidianus.JRFZ01104969.1                       246122 25 -    607251 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 3
s Elephantulus_edwardii.JH947257.1                         9113654 25 -  10337057 ACTCAACTG--TAGACACGTT---AAA-A--GC
i Elephantulus_edwardii.JH947257.1                       C 0 I 3
s Ellobius_lutescens.LOEQ01008920.1                          35279 25 +    110024 AGTCAATTC--CAACTATATT---AAA-A--GT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 3
s Ellobius_talpinus.LOJH01026522.1                           17200 25 +     18970 AGTCAATTC--CAACTATATT---AAA-A--GT
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 3
s Enhydra_lutris.KZ291758.1                               24925659 24 +  41312741 GGTCAATTC--TATACACATT---AA--A--GT
i Enhydra_lutris.KZ291758.1                              C 0 I 3
s Eptesicus_fuscus.JH977646.1                             12582889 25 +  14770903 agtcaaTTC--TAGACACATT---AAA-A--AC
i Eptesicus_fuscus.JH977646.1                            C 0 I 3
s Equus_asinus.JREZ01000139.1                              3045396 25 -   4378816 AGTCAATTT--TAGACACATT---AAA-A--AC
i Equus_asinus.JREZ01000139.1                            C 0 I 3
s Equus_caballus.CM000403.2                               21379326 25 +  39960074 AGTCAATTT--TAGACACATT---AAA-A--AC
i Equus_caballus.CM000403.2                              C 0 I 3
s Equus_przewalskii.KK951119.1                              415308 25 -    498745 AGTCAATTT--TAGACACATT---AAA-A--AC
i Equus_przewalskii.KK951119.1                           C 0 I 3
s Erinaceus_europaeus.JH835339.1                           3671599 25 +   7059049 AATCAATTC--TAGATACATT---AAA-A--GC
i Erinaceus_europaeus.JH835339.1                         C 0 I 3
s Erythrocebus_patas.Contig38                               266108 28 +  21539334 AGTCAATTT--TAGACATATTTTAAAA-A--AT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74598 25 -    133382 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_57114              2320 25 +     25849 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 I 3
s Felis_catus.CM001381.2                                 186250747 25 - 206538554 AAATAATTC--TAGGCACATT---AAG-A--AT
i Felis_catus.CM001381.2                                 C 0 I 3
s Felis_catus_fca126.CM031415.1                          185120703 25 - 205367284 AAATAATTC--TAGGCACATT---AAG-A--AT
i Felis_catus_fca126.CM031415.1                          C 0 I 3
s Felis_nigripes.FelNig_flattened_line_44075                  1345 25 +     25330 AAATAATTC--TAGGCACATT---AAG-A--AC
i Felis_nigripes.FelNig_flattened_line_44075             C 0 I 3
s Fukomys_damarensis.KN121974.1                            2926207 25 -   3816255 AGTCAAT--TCTAGATACCTT---AGA-A--AC
i Fukomys_damarensis.KN121974.1                          C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_51812                5194 25 -     28519 AATCAATTA--TAGACATACT---AAA-A--AC
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2380 25 +    660261 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 3
s Glis_glis.GliGli_scaffold_163929                            5208 23 -      6791 AGTCAATTC--TA--TATATT---GAA-A--GC
i Glis_glis.GliGli_scaffold_163929                       C 0 I 3
s Gorilla_beringei.k141_3218903                                884 26 -      2763 AGTCAATTT--TAGA--CATTTTAAAA-A--AT
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                259304 26 - 186649187 Agtcaattt--taga--cattttaaaa-a--at
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    7124 25 -     78134 TGTCAATGC--TAGATATATT---GAA-A--GC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 3
s Helogale_parvula.HelPar_flattened_line_2585                34380 25 -    327341 AGACGGTTC--TAGGAACATT---AAG-A--AG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 3
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 16047 25 +     48891 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 3
s Heterocephalus_glaber.JH602082.1                         1938644 25 -  22651954 AGTCAAT--TCTAGATACCTT---AGA-A--AC
i Heterocephalus_glaber.JH602082.1                       C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6365 25 +      8654 TGGCTATTG--TAGATGTCAG---AAA-A--GC
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11433 25 -     36432 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 3
s Hipposideros_armiger.JXIK01000431.1                      1556478 13 -   1711038 NNNNNNNNN--NNNN------------------
i Hipposideros_armiger.JXIK01000431.1                    C 0 N 0
s Hipposideros_galeritus.HipGal_scaffold_108494                201 23 -      8370 AGTCAATTC--TAGA--CATT---AAA-A--AC
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 I 3
s Hoolock_leuconedys.ctg274                                    145767 26 -    630532 AGTCAATTT--TAGA--TATTTTTAAA-A--AT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  74043 25 +     83186 AGACAGTTT--TAGGCACATT---AAG-A--AG
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 3
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75582 23 +    143317 AGTTACA----TGAGCACATT---AAA-A--AC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 3
s Hylobates_agilis.k141_1155965                               8814 26 +     12352 AGTCAATTT--TAGA--TATTTTTTAA-A--AT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              16001 26 +     55766 AGTCAATTT--TAGA--TATTTTTTAA-A--AT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055529 26 + 191637585 AGTCAATTT--TAGA--TATTTTTTAA-A--AT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804407 26 +  11177569 AGTCAATTT--TAGA--TATTTTTTAA-A--AT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11447 25 -    135385 GGTGAATTC--TAGACACATT---GAA-A--AC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 3
s Ictidomys_tridecemlineatus.JH393364.1                     390696 25 +   7955117 AGTCAGTTC--TAGAAATTCT---AAA-A--AC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Inia_geoffrensis.IniGeo_flattened_line_69447               13499 25 -     16823 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 3
s Jaculus_jaculus.JH725527.1                               1243181 25 +   9596543 agtcaattc--tatatatatt---aaa-a--ac
i Jaculus_jaculus.JH725527.1                             C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_3970                 75337 25 -     97402 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 3
s Lagothrix_lagothricha.k141_246028                          45623 28 +    110728 AGACAATTT--TAGACATATTTTTAAA-A--AT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1576 25 -     25587 AGTTAATTC--CAGACACATT---AAA-A--AC
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 I 3
s Leontocebus_fuscicollis.k141_3470480                        1068 28 -     23187 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1382 28 -     14280 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                        1022 28 +      3713 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1208 28 +      8855 AGTCAATTT--TAGACATATTTGTAGA-A--AT
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         6009 28 -     13645 AGTCAATTT--TAGACATATTTGTAGA-A--AT
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816928 25 -   3914936 CGTCAATTC--TATACACATT---AAA-A--AC
i Leptonychotes_weddellii.KB714746.1                     C 0 I 3
s Lepus_americanus.LepAme_scaffold_56121                     23195 24 +     24238 TGTCAATTT--TAGTCATACT---AAG-A---A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 3
s Lipotes_vexillifer.KE559953.1                             344681 25 +    662738 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Lipotes_vexillifer.KE559953.1                          C 0 I 3
s Lophocebus_aterrimus.ctg367                               337038 28 -   1826925 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39088103 25 +  43346337 GGTCAATTG--CAGACGTCTT---AAA-A--GC
i Loxodonta_africana.GL010049.1                          C 0 I 3
s Lycaon_pictus.CM007581.1                                41618333 25 +  59628241 GATCAATTC--TAGACACATT---AAA-A--AC
i Lycaon_pictus.CM007581.1                               C 0 I 3
s Macaca_arctoides.k141_1757516                              48435 28 -     61512 AGTCAATTT--TAGATATATTTTTAAA-A--AT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 376097 28 -  60120075 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28365 28 +     30207 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3203 28 -      5035 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28318 28 +     30527 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39494 28 -     50087 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49239 28 +     51645 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418441 28 - 187317192 AGTCAattt--tagacatatttttaaa-a--at
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402672 28 +  25927173 AGTCAattt--tagacatatttttaaa-a--at
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51843 28 -     62418 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4374 28 +     14901 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48316 28 +     59329 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274223 28 +    668171 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2855 28 -      5049 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 6022 28 +     17132 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226776 25 -    270270 AGTCAGTTC--TAGACACATT---AAA-A--GC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 3
s Mandrillus_leucophaeus.scaffold280                        325505 28 +  24302211 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360336 28 -    752769 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676956 25 -    737560 AGTCAATTC--TAGACACATT---AAA-A--AT
i Manis_javanica.JSZB01003497.1                          C 0 I 3
s Manis_pentadactyla.KN006162.1                             224252 25 +    317179 AGTCAATTC--TAGAcacatt---aaa-a--at
i Manis_pentadactyla.KN006162.1                          C 0 I 3
s Marmota_marmota.CZRN01000018.1                           7504896 25 +  40650429 AGTCAGTTC--TAGAAATTCT---AAA-A--AC
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                       154096 26 +    207569 AGTCAATTC--TAGACACATT---AAAAA--AC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_19308             29671 24 -     74585 GGTCAATTC--TATACACATT---AA--A--GC
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 3
s Meriones_unguiculatus.MerUng_scaffold_7390                 53258 25 -    140813 AGTCAATTC--CAAGTATATT---AAA-A--AC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 3
s Mesoplodon_bidens.MesBid_scaffold_6114                     90965 25 +     93471 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 3
s Mico_argentatus.k141_582562                                12618 28 +     17804 GGTCAATTT--TAGACATACTTTTAGG-A--AT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                345 28 +      5551 GGTCAATTT--TAGACATACTTTTAGG-A--AT
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21429 28 -     26561 GGTCAATTT--TAGACATACTTTTAGG-A--AT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49796 25 +    145209 CGTCATTTG--TAGACACAAT---AAG-A--GC
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_2233                188697 25 +    200668 AGTCAATTC--CAGACACATT---AAA-A--AC
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 3
s Microtus_ochrogaster.CM001695.1                         15966687 24 +  27267610 AGTCAATTC--CAACTATAGT---A-A-A--GT
i Microtus_ochrogaster.CM001695.1                        C 0 I 3
s Miniopterus_natalensis.LDJU01000034.1                    6368517 25 -   8254450 agtcaatTC--TGGCCTCATT---AAA-A--AC
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 3
s Miniopterus_schreibersii.MinSch_scaffold_23309             46248 25 -     48117 AGTCAATTC--TGGCCTCATT---AAA-A--AC
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 3
s Miopithecus_ogouensis.k141_1534655                         25604 28 -     27822 AGTCAATTT--TAGACGTATTTTTAAA-A--AT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12161 25 +     27589 CGTCAATTC--TATACACATT---AAA-A--AC
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 3
s Monodon_monoceros.MonMon_M_scaffold_103                   363073 25 +    437263 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183142 25 +    366855 AGTCAATTC--TAGACACATT---AAA-A--AC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Moschus_moschiferus.MosMos_scaffold_13123                  32278 25 -     82753 AGTCAATTC--TAGACTCATT---AGA-A--AC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 3
s Mungos_mungo.MunMun_flattened_line_18455                   22130 25 -     63510 AGACAGTTC--TAGGAACATT---AAG-A--AG
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 3
s Murina_feae.MurFea_scaffold_17764                          45505 25 +     47283 AGTCAATTC--TAGACACATT---AAA-A--AC
i Murina_feae.MurFea_scaffold_17764                      C 0 I 3
s Mus_caroli.LT608237.1                                   35597878 25 + 120012414 AGTCAATTC--CAACTATATT---AAA-A--AC
i Mus_caroli.LT608237.1                                  C 0 I 3
s Mus_musculus.chr8                                       41691420 25 + 129401213 AGTCAATTC--CAAGTATATT---AAA-A--AC
i Mus_musculus.chr8                                      C 0 I 3
s Mus_pahari.LT608297.1                                   58219379 25 +  89631738 AGTCAATTC--CAACTATATA---AAA-A--AC
i Mus_pahari.LT608297.1                                  C 0 I 3
s Mus_spretus.CM004101.1                                  39500339 25 + 130317789 AGTTAATTC--CAAGTATATT---AAA-A--AC
i Mus_spretus.CM004101.1                                 C 0 I 3
s Muscardinus_avellanarius.MusAve_scaffold_5560               3220 25 -    124358 AGTCAGTTC--TAGATATATT---GAG-A--TG
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 I 3
s Mustela_putorius.JH418006.1                             14358621 24 +  14710649 ggTCAATTC--TATACACATT---AA--A--GC
i Mustela_putorius.JH418006.1                            I 74 I 3
s Myocastor_coypus.MyoCoy_scaffold_57531                      1302 25 -     27262 AGTCAAT--TCTAGATACATT---AAA-A--AT
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 I 3
s Myotis_brandtii.KE162005.1                               9797510 25 +  10118263 agtcaaTTC--TAGACACATT---AAA-A--AC
i Myotis_brandtii.KE162005.1                             C 0 I 3
s Myotis_davidii.KB100139.1                                4391684 25 +   6019432 AGTCAATTC--TAGACACATT---AAA-A--AC
i Myotis_davidii.KB100139.1                              C 0 I 3
s Myotis_lucifugus.GL429869.1                               387723 25 +   4330536 agtcaaTTC--TAGACACATT---AAA-A--AC
i Myotis_lucifugus.GL429869.1                            C 0 I 3
s Myotis_myotis.MyoMyo_scaffold_66571                         6510 25 +     18357 AGTCAATTC--TAGACACATT---AAA-A--AC
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 3
s Nannospalax_galili.KL204047.1                             950274 26 +   3037898 AGtcaattt--caaatatatt---aaa-a-aag
i Nannospalax_galili.KL204047.1                          C 0 I 3
s Nasalis_larvatus.k141_1350636                              32389 28 +     34575 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469608 25 -  31847680 CGTCAACTC--TATACACATT---AAA-A--AC
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 3
s Neophocaena_asiaeorientalis.KZ687982.1                   1235731 25 -   7148211 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_7894                   131422 25 -    149072 AGTCAATTC--TAGTCACATT---AAA-A--AC
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 3
s Nomascus_annamensis.k141_1771965                           56702 26 -    132029 AGTCAATTT--TAGA--TATTTTTAAA-A--AT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12797 26 -     16345 AGTCAATTT--TAGA--TATTTTTAAA-A--AT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18686 26 +     22201 AGTCAATTT--TAGA--TATTTTTAAA-A--AT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416916 26 -  22158432 AGTCAATTT--TAGA--TATTTTTAAA-A--AT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29091 26 -     54323 AGTCAATTT--TAGA--TATTTTTAAA-A--AT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                202038 25 +   9404916 GATCAATTC--TAGACACATT---AAA-A--AC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 3
s Octodon_degus.JH651603.1                                11059576 25 -  11899542 AGTCAGT--TCTAGGTACATT---AAA-A--AT
i Octodon_degus.JH651603.1                               C 0 I 3
s Odobenus_rosmarus.KB229312.1                             1455377 25 +   2017862 GGTCAATTC--TATACACATT---AAA-A--AC
i Odobenus_rosmarus.KB229312.1                           C 0 I 3
s Odocoileus_virginianus.KZ100018.1                         442674 25 -    630418 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Odocoileus_virginianus.KZ100018.1                      C 0 I 3
s Okapia_johnstoni.LVCL01S0005463.1                          22331 25 +    150152 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 3
s Ondatra_zibethicus.OndZib_scaffold_7387                    97303 25 -    140218 AGTCAATTT--CAACTATGTT---AAA-A--GT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_28377                    7846 25 -     41509 AGTCACTTC--CAACCATGTT---AAA-A--GC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 3
s Orcinus_orca.KB316932.1                                  8106144 25 +  10937097 AGTCAATTC--TAGACTCATT---AAA-A--AG
i Orcinus_orca.KB316932.1                                C 0 I 3
s Orycteropus_afer.OryAfe_flattened_line_201229               3134 25 +     11607 AGTCAATTG--TAGACACATT---AAA-A--CC
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 I 3
s Oryctolagus_cuniculus.CM000791.1                       107109484 24 - 174332312 TTTCAATTA--TAGACATACT---AAG-A---A
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 3
s Otocyon_megalotis.JAEUCK010005147.1                        42988 25 +    559221 GATCAATTC--TAAACACATT---AAA-A--AC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 3
s Ovis_aries.CM001607.2                                   26411073 25 -  44047080 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Ovis_aries.CM001607.2                                  C 0 I 3
s Ovis_canadensis.OviCan_scaffold_67953                      11696 25 +     17875 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 3
s Pan_paniscus.AJFE02001037.1                                  663 26 +      1186 AGTCAactt--taga--catttttaaa-a--at
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1477283 26 - 189151597 AGTCAactt--taga--catttttaaa-a--at
i Pan_troglodytes.CM009242.2                             C 0 I 17
s Panthera_onca.PanOnc_flattened_line_3271                   28677 25 -    230217 AAATAATTC--TAGGCACATT---AAG-A--AC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 3
s Panthera_pardus.KV860321.1                              18465918 25 -  18783137 AAATAATTC--TAGGCACATT---AAG-A--AC
i Panthera_pardus.KV860321.1                             C 0 I 3
s Panthera_tigris.KE722367.1                               3976517 25 +   8748460 AAATAATTC--TAGGCACATT---AAG-A--AC
i Panthera_tigris.KE722367.1                             C 0 I 3
s Pantholops_hodgsonii.KE114653.1                          1622591 25 +   2937107 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Pantholops_hodgsonii.KE114653.1                        C 0 I 3
s Papio_anubis.CM001495.2                                   246520 28 - 183742232 AGTCAattt--tagacatatttttaaa-a--at
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12805 28 +     21308 AGTCAATTT--TAGACATATTTTTAAA-A--TT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295548 28 -  20919399 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25447 28 -     27687 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2124 28 +     10553 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  2085 28 -     10386 AGTCAATTT--TAGACATATTTTTAAA-A--TT
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18798 25 +     78924 AGACAGTTC--TAGGCACATT---AAG-A--AC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 3
s Perognathus_longimembris.PerPac_flattened_line_89005        7624 25 +      9367 AGTCAATTG--TCTATATCTT---AGA-A--TT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 3
s Peromyscus_maniculatus.KI615324.1                         251063 25 +  18517816 AGTCAATTT--CAACTATGTT---AAA-A--GC
i Peromyscus_maniculatus.KI615324.1                      C 0 I 3
s Petromus_typicus.PetTyp_scaffold_17301                     35633 25 -     56120 GGTCAAC--CCTAGATGCATT---AAA-T--GC
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159               7665 25 -     63832 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 3
s Piliocolobus_badius.k141_2704958                            5770 28 +     55023 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5293 28 -     89929 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5881 28 +     40849 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257610 28 +  14605196 AGTCAattt--tagacatatttttaaa-a--at
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             8000 25 +     22231 AGTCAATTC--TAGACACATT---AAA-A--AC
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 3
s Pithecia_albicans.k141_1239476                             67135 28 +    207309 AGTCAATTT--TAGATATATTTTTAAA-A--CT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8230 28 -     25401 AGTCAATTT--TAGATATATTTTTAAA-A--CT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               33976 28 +     58159 AGTCAATTT--TAGATATATTTTTAAA-A--CT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34252 28 +     63561 AGTCAATTT--TAGATATATTTTTAAA-A--CT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           34007 28 +     51148 AGTCAATTT--TAGATATATTTTTAAA-A--CT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              558983 28 -   4542175 AGTCAATTT--TAGATATATTTTTAAA-A--CT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           33991 28 +     51125 AGTCAATTT--TAGATATATTTTTAAA-A--CT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4913 25 +     19503 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 3
s Plecturocebus_bernhardi.k141_2549090                       10423 28 +     39866 CATCAATTT--TAGACATGTTTTTTAA-A--AC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5505 28 -      9282 CATCAATTT--TAGACATGTTTTTTAA-A--AC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44909 28 -     87950 CATCAATTT--TAGACATGTTTTTTAA-A--AC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45303 28 -     88961 CATCAATTT--TAGACATGTTTTTTAA-A--AC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10001 28 -     39403 CATCAATTT--TAGACATGTTTTTTAA-A--AC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44953 28 +     87928 CATCAATTT--TAGACATGTTTTTTAA-A--AC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         10000 28 -     60166 CATCAATTT--TAGACATGTTTTTTAA-A--AC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16921 28 -     67232 CATCAATTT--TAGACATGTTTTTTAA-A--AC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44853 28 -     90634 CATCAATTT--TAGACATGTTTTTTAA-A--AC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46320 28 +     89403 CATCAATTT--TAGACATGTTTTTTAA-A--AC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182464 26 - 189387572 AGtcaattt--taga--cattttttaa-a--at
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197206 26 -   9816681 AGTCAATTT--TAGA--CATTTTTTAA-A--AT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30968 28 +     69807 AGTCAATTT--TAGACATATTTTTTAA-A--AT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48151 28 -     80239 AGTCAATTT--TAGACATATTTTTTAA-A--AT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2897 25 -     12774 TGGCTATTG--TAGATGTCAG---AAA-A--GC
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 I 3
s Psammomys_obesus.NESX01036366.1                            40791 25 +     52041 AGTCAATTC--CAAGTATATT---AAA-A--AC
i Psammomys_obesus.NESX01036366.1                        C 0 I 3
s Pteronotus_parnellii.KE847780.1                            55780 25 -     66298 AGTCAATTC--TAGACACATT---ACA-A--AC
i Pteronotus_parnellii.KE847780.1                        C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8156 24 -     18639 GGTCAATTC--TATACACATT---AA--A--AC
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 3
s Pteropus_alecto.KB030862.1                               5844353 25 -  28871421 AGTCAATTC--TAGACACATT---AAA-A--AC
i Pteropus_alecto.KB030862.1                             C 0 I 3
s Pteropus_vampyrus.KN525825.1                             3540869 25 -   4952924 AGTCAATTC--TAGACACATT---AAA-A--AC
i Pteropus_vampyrus.KN525825.1                           C 0 I 3
s Puma_concolor.QAVW01001104.1                            18102909 25 +  38429054 AAATAATTC--TAGGCACATT---AAG-A--AC
i Puma_concolor.QAVW01001104.1                           C 0 I 3
s Pygathrix_cinerea.k141_1153803                             30337 28 +     91421 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156888 28 -   7812017 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11188 28 +     72585 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5192 25 -     55207 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 3
s Rattus_norvegicus.chr16                                 37025998 25 -  90668790 AATGGATTC--CAACTATATT---AAA-A--AC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918250 25 +   3329780 AGTCAATTC--TAGATACATT---AAA-A--AC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 3
s Rhinopithecus_bieti.k119_778604                             4794 28 +      7119 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125464 28 + 195417433 AGTCAAttt--tagacatatttttaaa-a--at
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239636 28 -   7961872 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79099 21 -    116970 AGTCAATTC--TAGACACGTT---AA-------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 5
s Saguinus_bicolor.k141_161125                                9695 28 +     12412 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                              1017 28 +      9876 GGTCAATTT--TAGACATATTTTTAAA-A--AT
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16613 28 -     24931 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1492 28 +      4564 AGTCAATTT--TAGACATATTTTAAAA-A--AT
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4297 28 -      7443 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395330 28 - 209938924 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1914 28 +     10149 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1258 28 +     10417 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14643 25 +     16473 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 3
s Saimiri_boliviensis.NW_024100920.1                       1111382 28 + 121099817 AGTCAAttt--cagacatatttttaaa-a--at
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32951 28 -     47369 AGTCAATTT--CAGACATATTTTTAAA-A--AT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33334 28 -     79414 AGTCAATTT--CAGACATATTTTTAAA-A--AT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              30025 28 -     34454 AGTCAATTT--CAGACATATTTTTAAA-A--AT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17427 28 -     22428 AGTCAATTT--CAGACATATTTTTAAA-A--AT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32581 28 -     47109 AGTCAATTT--CAGACATATTTTTAAA-A--AT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240605 28 +   5703754 AGTCAATTT--TAGACATCTTTTTAAA-A--AT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10196 28 +     21866 AGTCAATTT--TAGACATCTTTTTAAA-A--AT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122688 25 +    313613 AATCAATTC--TAGACACATT---AAA-A--AC
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 3
s Semnopithecus_entellus.k141_583282                          1768 28 +     11297 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32161 28 +     58920 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18659 28 -     45317 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26317 28 -     42441 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1432920                     28993 28 -     29113 CGTCAATTT--TAGACATATTTTTAAA-A--AT
i Semnopithecus_schistaceus.k141_1432920                 C 0 N 0
s Semnopithecus_vetulus.k141_244474                          32081 28 -     48123 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52846 27 +     77746 AGTCAATTC--CAACTATATT---AAA-AATGC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_126            1867460 24 -   1910179 AATCC-GTC--TAGCTACATT---AAA-A--AC
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 3
s Sorex_araneus.JH798187.1                                 4674668 25 +  18376816 aattaattc--ttaacacatt---aaA-A--GG
i Sorex_araneus.JH798187.1                               C 0 I 3
s Spermophilus_dauricus.KZ294078.1                         1872259 25 +   3870691 AGTCAGTTC--TAGAAATTCT---AAA-A--AC
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525             16376 22 -     97271 ---CAATTC--TATACATATT---AAA-A--AC
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_6629             129006 25 +    196729 AGACAGTTC--TAGGAACATT---AAG-A--AG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 3
s Sus_scrofa.CM000828.4                                    6648284 25 +  69701581 AGTCAATTC--TAGAGTCATT---AAA-A--GC
i Sus_scrofa.CM000828.4                                  C 0 I 3
s Symphalangus_syndactylus.tarseq_199                       394173 26 +   1523678 AGTCAATTT--TAGA--TATTTTTAAA-A--AT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17718 24 +     22964 AGTTAATTC--TAGACACATT---AA--A--AC
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 3
s Tapirus_indicus.TapInd_scaffold_7432                      195117 25 +    199430 AGTCACTTC--TAGACACATT---AAA-A--AC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_755                    109097 25 -    539355 AGTCACTTC--TAGACACATT---AAA-A--AC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 3
s Tarsius_lariang.k141_1733899                                4726 19 +      9917 AGTCAGTCC--TAGACATTTT------------
i Tarsius_lariang.k141_1733899                           C 0 I 1
s Tarsius_wallacei.k141_226975                               11522 19 +     20590 AGTCAGTCC--TAGACATTTT------------
i Tarsius_wallacei.k141_226975                           C 0 I 1
s Theropithecus_gelada.CM009954.1                           356331 28 - 186847797 AGTCAattt--tagacatatttttaaa-a--at
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27948 25 -     33621 AGTCAAT--TCTTGATACATT---AAA-A--GT
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_31955                   22691 25 -     31044 AGTCAATTG--CGGACATATC---AAA-T--GC
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 3
s Tonatia_saurophila.TonSau_scaffold_294                    484027 25 -    610378 AGTCAATTC--TAGACACATT---AAA-A--GC
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 3
s Trachypithecus_auratus.k141_1189070                        24070 28 +     26378 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36868 28 -     78344 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23395 28 +     25722 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31824 28 -     62838 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31815 28 +     46913 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12553 28 -     28527 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33755 28 -     64340 AGTCAATTT--TAGACATATTTTAAAA-A--AT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31793 28 -     63452 AGTCAATTT--TAGACATATTTTAAAA-A--AT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13244 28 +     22490 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1210 28 +      9911 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                         1005 28 -     33539 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258764 28 -   6242583 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4783 28 +     19340 AGTCAATTT--TAGACATATTTTTAAA-A--AT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177901 25 -    200418 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 I 3
s Trichechus_manatus.JH594705.1                            6485701 25 -  10818551 AGTCAATTG--TAGACATGTT---AAA-A--GC
i Trichechus_manatus.JH594705.1                          C 0 I 3
s Tupaia_chinensis.KB320699.1                              1839681 25 -   4065304 AGTCAATTC--TAGACATATT---AAA-A--AC
i Tupaia_chinensis.KB320699.1                            C 0 I 273
s Tupaia_tana.TupTan_flattened_line_394                      13759 25 -     70247 AGTCAATTC--TAGACATGTT---AAA-A--AC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 266
s Tursiops_truncatus.MRVK01000835.1                       17369268 25 -  33153633 AGTCAATTC--TAGACTCATT---AAA-A--AG
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_46687                    7458 25 -     21056 AATCAACTC--TAGTTACATT---AAA-A--TC
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 3
s Ursus_maritimus.KK499267.1                                185581 25 +   5085361 GGTCAATTC--TATACACATT---AAA-A--AC
i Ursus_maritimus.KK499267.1                             C 0 I 3
s Vicugna_pacos.KN270157.1                                   80401 25 +   5488506 agtcaATTC--TAGGCTCATT---AAA-A--AC
i Vicugna_pacos.KN270157.1                               C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_12041                108932 25 -    112863 GATCAATTC--TAGACACATT---AAA-A--AC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 3
s Xerus_inauris.XerIna_scaffold_2302                        178129 20 -    224448 AGTCAGTTC--TAGAAATTCT---A--------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 5
s Zalophus_californianus.ZalCal_flattened_line_17732         32583 25 -     86975 GGTCAATTC--TATACACATT---AAA-A--AC
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_11398                       4631 25 -     63895 AGTCCATTC--CATATTTATT---AAA-A--AC
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1230 25 +      3447 AGTCAATTC--TAGACTCATT---AAA-A--AC
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 I 3
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      10157 17 +     36723 CTTAT--------T-TCTATAT-TA-----CT
s Acinonyx_jubatus.LLWD01001279.1                           816697 17 +   1699592 CTCAT--------A-TGTGCAT-TA-----CT
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     28891 15 +     63021 ATAAT--------T-A-T-TAT-CA-----CT
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419155 16 +  29979442 -TTAT--------T-TCTGTAT-TA-----CT
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 3 C 0
s Ailurus_fulgens.LNAC01001112.1                            219153 17 +    347723 CCTAT--------T-TCTGTAT-TA-----CT
i Ailurus_fulgens.LNAC01001112.1                         I 3 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    21662 16 -     61208 CTCAT--------T-TGT-TAT-TG-----CT
i Allactaga_bullata.AllBul_scaffold_20030                I 3 C 0
s Allenopithecus_nigroviridis.k141_3755588                   51105 17 +     53615 TTTAT--------T-TCTATTT-TA-----CT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3133 17 +     13857 CTTAT--------T-TCTATAT-TA-----CT
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19689 17 -     21945 TTTAT--------T-TCTATAT-TA-----CT
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21374 17 +     32033 CTTAT--------T-TCTATAT-TA-----CT
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74629 17 -     84148 CTTAT--------T-TCTGCAT-TA-----CT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46883 17 -     78289 CTTAT--------T-TCTACAT-TA-----CT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46299 17 +     55831 CTTAT--------T-TCTGCAT-TA-----CT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44761 17 -     64179 CTTAT--------T-TCTGTAT-TA-----CT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1864 17 -      3959 CTTAT--------T-TCTATAT-TA-----CT
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43386 17 +     45454 CTTAT--------T-TCTGTAT-TA-----CT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              49035 17 +     70886 CTTAT--------T-TCTACAT-TA-----CT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11205 17 +     30854 CTTAT--------T-TCTATAT-TA-----CT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35341 17 +     42133 CTTAT--------T-TCTGTAT-TA-----CT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592360 17 +   2318259 CTTGT--------T-TCTATAT-TA-----CT
i Ammotragus_lervia.NIVO01071767.1                       I 3 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180766 16 -    412891 CCT-T--------A-TCTATAT-TA-----CT
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53516 17 -     68529 CTTGT--------T-TCTATAT-TA-----CT
i Antilocapra_americana.AntAmePen_scaffold_21030         I 3 C 0
s Aotus_azarae.k141_887050                                    3546 17 +     17741 CTTAT--------T-TCTATAT-TA-----CT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4171 17 -     15923 CTTAT--------T-TCTATAT-TA-----CT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674453 17 +   5030052 cttat--------t-tctatAT-TA-----CT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4447 17 -     16391 CTTAT--------T-TCTATAT-TA-----CT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               4006 17 -     17186 CTTAT--------T-TCTATAT-TA-----CT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27614 17 -     32367 GTTAT--------T-TCTCTAT-TA-----CT
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9280 17 -     15198 TCTGT--------A-TCTGTAT-TA-----CT
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 3 C 0
s Ateles_geoffroyi_b.tarseq_1536                               277104 17 +  21539123 CTTAT--------T-TCTATAT-TA-----CT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13269 17 +     48076 CTTAT--------T-TCTATAT-TA-----CT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8405 17 -     28759 CTTAT--------T-TCTATAT-TA-----CT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35961 17 +     44353 CTTAT--------T-TCTATAT-TA-----CT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51331 17 -     71267 CTTAT--------T-TCTATAT-TA-----CT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25389 17 -     33135 CTTAT--------T-TCTATAT-TA-----CT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7967011 17 -  23207421 CTTGT--------T-TCTGTAT-TA-----CT
i Balaenoptera_acutorostrata.KI537508.1                  I 3 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3512 17 -     25979 CTTGT--------T-TCTGTAT-TA-----CT
i Balaenoptera_bonaerensis.DF411050.1                    I 3 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93347 17 +    124022 CTTGT--------T-TCTATAT-TA-----CT
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 3 C 0
s Bison_bison.KN261452.1                                     36536 17 +    288883 CTTGT--------T-TCTATAT-TA-----CT
i Bison_bison.KN261452.1                                 I 3 C 0
s Bos_indicus.CM003047.1                                  28423689 17 -  48749331 CTTGT--------T-TCTATAT-TA-----CT
i Bos_indicus.CM003047.1                                 I 3 C 0
s Bos_mutus.JH880303.1                                      769290 17 +   1948126 CTTGT--------T-TCTATAT-TA-----CT
i Bos_mutus.JH880303.1                                   I 3 C 0
s Bos_taurus.CM000203.6                                   27559835 17 -  45695690 CTTGT--------T-TCTATAT-TA-----CT
i Bos_taurus.CM000203.6                                  I 3 C 0
s Bubalus_bubalis.KI419123.1                               1536516 17 -   4408762 CTTGT--------T-TCTGTAT-TA-----CT
i Bubalus_bubalis.KI419123.1                             I 3 C 0
s Cacajao_ayresi.k141_96119                                  10183 17 +     28062 CTTAT--------T-TCTATAT-TA-----CT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45474 17 -     91139 CTTAT--------T-TCTATAT-TA-----CT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  23001 17 +     95584 CTTAT--------T-TCTATAT-TA-----CT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22914 17 +    119600 CTTAT--------T-TCTATAT-TA-----CT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12537 17 +     18648 CTCAT--------T-TCTATAT-TA-----CT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             12040 17 -     13885 CTCAT--------T-TCTATAT-TA-----CT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            4251 17 -      8861 CTCAT--------T-TCTATAT-TA-----CT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456593 17 + 189096842 CTCAT--------T-TCTATAT-TA-----CT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               4167 17 +      8664 CTCAT--------T-TCTATAT-TA-----CT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7635055 17 +  17673402 CTTAT--------T-TCTATAT-TA-----CT
i Camelus_bactrianus.KN276810.1                          I 3 C 0
s Camelus_dromedarius.KN272107.1                           4669356 17 +   7040546 CTTAT--------T-TCTATAT-TA-----CT
i Camelus_dromedarius.KN272107.1                         I 3 C 0
s Camelus_ferus.KB017975.1                                 1213054 17 +   1652518 CTTAT--------T-TCTATAT-TA-----CT
i Camelus_ferus.KB017975.1                               I 3 C 0
s CanFam4.chr16                                           42509093 16 +  60362399 CTTAT--------A-TCTGTAT-TT-----C-
i CanFam4.chr16                                          I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12728 16 -     23171 CTTAT--------A-TCTGTAT-TT-----C-
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 3 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          226069 16 +   9314153 CTTAT--------A-TCTGTAT-TT-----C-
i Canis_lupus_dingo.QKWQ01000480.1                       I 3 C 0
s Canis_lupus_familiaris.chr16                            41619206 16 +  59632846 CTTAT--------A-TCTGTAT-TT-----C-
i Canis_lupus_familiaris.chr16                           I 3 C 0
s Canis_lupus_orion.HG994398.1                            45110787 16 -  63665305 CTTAT--------A-TCTGTAT-TT-----C-
i Canis_lupus_orion.HG994398.1                           I 3 C 0
s Capra_aegagrus.CM003241.1                               27416364 17 -  46296322 CTTGT--------T-TCTATAT-TA-----CT
i Capra_aegagrus.CM003241.1                              I 3 C 0
s Capra_hircus.CM004588.1                                 26598361 17 +  44709034 CTTGT--------T-TCTATAT-TA-----CT
i Capra_hircus.CM004588.1                                I 3 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2272 17 -     20114 CTTAC--------T-TTTATGTT-A-----CC
i Capromys_pilorides.CapPil_scaffold_26391               I 3 C 0
s Carlito_syrichta.NW_007259797.1                           274555  7 +    496798 CATAT--------T-A----------------
i Carlito_syrichta.NW_007259797.1                        I 1 I 2
s Carollia_perspicillata.CarPer_scaffold_107871               4153 17 +      9923 CCTGC--------A-TCTATAT-TA-----CT
i Carollia_perspicillata.CarPer_scaffold_107871          I 3 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31644 17 -     39886 CTTAT--------C-TGTCTAT-TA-----CT
i Castor_canadensis.CasCan_scaffold_39952                I 3 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83364 17 -    217609 CTTGT--------T-TCTATAT-TA-----CC
i Catagonus_wagneri.CatWag_scaffold_2839                 I 3 C 0
s Cavia_aperea.AVPZ01000300.1                              5000240 16 +  23392119 tttat--------t-tttctgt--a-----cc
i Cavia_aperea.AVPZ01000300.1                            I 3 C 0
s Cavia_porcellus.DS562891.1                               5003681 16 +  23407841 tttat--------t-tttctgt--a-----cc
i Cavia_porcellus.DS562891.1                             I 3 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          566 16 -    143979 TTTAT--------T-TTTCTGT--A-----CC
i Cavia_tschudii.CavTsc_scaffold_8919                    I 3 C 0
s Cebuella_niveiventris.k141_592277                           7508 17 -     12580 CTCAT--------T-TCTATAT-TA-----CT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45617 17 +     53515 CTCAT--------T-TCTATAT-TA-----CT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376243 17 -  26074798 CTTAT--------T-TCTATGT-TA-----CT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10312 17 -     34880 CTTAT--------T-TCTATAT-TA-----CT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69410 17 -     89041 CTTAT--------T-TCTATGT-TA-----CT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2218  7 -     76265 CATAT--------T-A----------------
i Cephalopachus_bancanus.k141_1140705                    I 1 I 2
s Ceratotherium_simum.JH767749.1                          15495685 18 -  27778364 CTTAT--------C-TCTGTATTCA-----CT
i Ceratotherium_simum.JH767749.1                         I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22518 18 +     27315 CTTAT--------C-TCTGTATTCA-----CT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 3 C 0
s Cercocebus_atys.KQ010504.1                                144189 17 -   4669795 cttat--------t-tctatAT-TA-----CT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                          163 17 +      3297 CTTAT--------T-TCTATAT-TA-----CT
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3361 17 -     14410 CTTAT--------T-TCTATAT-TA-----CT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47743 17 -    148725 CTTAT--------T-TCTATAT-TA-----CT
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        30020 17 -     40656 CTTAT--------T-TCTATAT-TA-----CT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9979 17 +     20796 CTTAT--------T-TCTATAT-TA-----CT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            15093 17 -     17524 CTTAT--------T-TCTATAT-TA-----CT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30826 17 -     34525 CTTAT--------T-TCTATAT-TA-----CT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14604 17 -     25376 CTTAT--------T-TCTATAT-TA-----CT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367193 17 -  39242232 CTTAT--------T-TCTATAT-TA-----CT
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272918 17 +  21565898 CTTAT--------T-TCTATAT-TA-----CT
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35285 17 -     45857 CTTAT--------T-TCTATAT-TA-----CT
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30186 17 -     32606 CTTAT--------T-TCTATAT-TA-----CT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6341 17 +      8499 CTTAT--------T-TCTATAT-TA-----CT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28746 17 +     70610 CTTAT--------T-TCTATAT-TA-----CT
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25708 17 +     36323 CTTAT--------T-TCTATAT-TA-----CT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15610 17 -     19938 TTTAT--------T-TCTATAT-CA-----CT
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 3 C 0
s Cheracebus_lucifer.k141_2312002                            11277 17 -     32913 CTTAT--------T-TCTATAT-TA-----CT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21690 17 -     40346 CTTAT--------T-TCTATAT-CA-----CT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21944 17 +    216457 CTTAT--------T-TCTATAT-TA-----CT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21734 17 +     39636 CTTAT--------T-TCTATAT-TA-----CT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33826 17 -     52013 CTTAT--------T-TCCGTAT-TA-----CT
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44814 17 -    112038 CTTAT--------T-TCTATAT-TA-----CT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10364 17 +     34062 CTTAT--------T-TCTATAT-TA-----CT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346608 17 +  18827391 CTTAT--------T-TCTATAT-TA-----CT
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13147 17 -     44032 CTTAT--------T-TCTATAT-TA-----CT
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            307994 17 - 135778131 cttat--------t-tctatAT-TA-----CT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2286 17 +     10270 CTTAT--------T-TCTATGT-TA-----CC
i Choloepus_didactylus.ChoDid_scaffold_147047            I 3 C 0
s Choloepus_hoffmanni.KN194906.1                            609763 17 -    839153 CTTAT--------T-TCTATGT-TA-----CC
i Choloepus_hoffmanni.KN194906.1                         I 3 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2532 17 -      4087 CTTAT--------T-TCTGTAT-TA-----CT
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          I 3 C 0
s Colobus_angolensis.KN981557.1                             412402 17 -   2368649 cttat--------t-tctatAT-TA-----CT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382284 17 - 200372422 CTTAT--------T-TCTATAT-TA-----CT
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5837 17 -     84244 CTTAT--------T-TCTATAT-TA-----CT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810865 17 +  53390261 ATAAT--------T-TCTATAT-TA-----CT
i Condylura_cristata.JH655891.1                          I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6434 17 -      8242 CCTAT--------A-TCGATAT-TT-----TT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 3 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47584 15 -     83289 CTCAT--------T-T-T-TAT-TG-----CT
i Cricetomys_gambianus.CriGam_scaffold_14425             I 3 C 0
s Cricetulus_griseus.LT883664.1                          213119102 15 - 224834208 CTCAT--------T-G-T-TAT-TA-----CT
i Cricetulus_griseus.LT883664.1                          I 3 C 0
s Crocidura_indochinensis.CroInd_scaffold_205242                24 13 +      5812 ATTAT--------T-TG----T-TA-----CT
i Crocidura_indochinensis.CroInd_scaffold_205242         I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              8036 17 +     87169 CTTAT--------A-TGTGCAT-TA-----CT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650326 10 -   1526836 ----------------CTCTAC-TA-----CC
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 8 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22944 17 +     50838 CTTAT--------T-TTTCTTTT-A-----CC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 3 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12433 16 +     36344 -TTAT--------T-TTTCTGTT-A-----CC
i Cuniculus_paca.CunPac_flattened_line_7025              I 3 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31873 17 +     75252 TTTAT--------T-TTTCTGTT-A-----CC
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 3 C 0
s Dasypus_novemcinctus.JH564415.1                          2113353 17 -   2246927 CGTGT--------T-TCTCTGT-TA-----CT
i Dasypus_novemcinctus.JH564415.1                        I 3 C 0
s Delphinapterus_leucas.KZ290073.1                        18635423 17 -  35494412 CTTGT--------T-TCTGTAT-TA-----CT
i Delphinapterus_leucas.KZ290073.1                       I 3 C 0
s Desmodus_rotundus.KZ672289.1                            11869146 17 -  20541912 CGTGT--------A-TCTATAT-TA-----CT
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667956 18 -   1390856 CTTAT--------A-TCTATATTCA-----CT
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142761 18 -    198055 CTTAT--------A-TCTATATTCA-----CT
i Diceros_bicornis.DicBicMic_scaffold_5955               I 3 C 0
s Dipodomys_ordii.KN672350.1                              18955442 17 -  37912305 CTCAT--------C-TGTCCAT-TA-----CT
i Dipodomys_ordii.KN672350.1                             I 3 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                   1050 13 +     14058 ----A--------C-TGTCTAT-TA-----CT
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 13004 17 +     14636 TTTAT--------T-TTTCTGTT-A-----CC
i Dolichotis_patagonum.DolPat_scaffold_80628             I 26 I 117
s Echinops_telfairi.JH980293.1                            62858643 17 - 111700974 CTTAT--------T-TCTATAT-TA-----CT
i Echinops_telfairi.JH980293.1                           I 3 C 0
s Eidolon_helvum.AWHC01266696.1                               9831 17 +     19438 CCTAT--------A-TCTATAT-TA-----CT
i Eidolon_helvum.AWHC01266696.1                          I 3 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       246150 17 -    607251 CTTGT--------T-TCTATAT-TA-----CT
i Elaphurus_davidianus.JRFZ01104969.1                    I 3 C 0
s Elephantulus_edwardii.JH947257.1                         9113682 17 -  10337057 TTTAT--------T-CTTATAT-ta-----tt
i Elephantulus_edwardii.JH947257.1                       I 3 I 312
s Ellobius_lutescens.LOEQ01008920.1                          35307 15 +    110024 CTCAT--------T-G-T-TAT-TA-----CT
i Ellobius_lutescens.LOEQ01008920.1                      I 3 C 0
s Ellobius_talpinus.LOJH01026522.1                           17228 15 +     18970 CTCAT--------T-G-T-TAT-TA-----CT
i Ellobius_talpinus.LOJH01026522.1                       I 3 C 0
s Enhydra_lutris.KZ291758.1                               24925686 17 +  41312741 CTTAT--------T-TCTGTAT-TA-----CT
i Enhydra_lutris.KZ291758.1                              I 3 C 0
s Eptesicus_fuscus.JH977646.1                             12582917 17 +  14770903 CCTAT--------A-TCTATAT-TA-----CT
i Eptesicus_fuscus.JH977646.1                            I 3 C 0
s Equus_asinus.JREZ01000139.1                              3045424 17 -   4378816 CTTAT--------A-TCTATAT-TA-----CT
i Equus_asinus.JREZ01000139.1                            I 3 C 0
s Equus_caballus.CM000403.2                               21379354 17 +  39960074 CTTAT--------A-TCTATAT-TA-----CT
i Equus_caballus.CM000403.2                              I 3 C 0
s Equus_przewalskii.KK951119.1                              415336 17 -    498745 CTTAT--------A-TCTGTAT-TA-----CT
i Equus_przewalskii.KK951119.1                           I 3 C 0
s Erinaceus_europaeus.JH835339.1                           3671627 14 +   7059049 AT-----------T-TCTGTAT-TA-----CT
i Erinaceus_europaeus.JH835339.1                         I 3 C 0
s Erythrocebus_patas.Contig38                               266136 17 +  21539334 TTTAT--------T-TCTATAT-TA-----CT
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74626 17 -    133382 CTTGT--------T-TCTGTAT-TA-----CT
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 3 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2348 17 +     25849 CTTGT--------T-TCTGTAT-TA-----CT
i Eubalaena_japonica.EubJap_flattened_line_57114         I 3 C 0
s Felis_catus.CM001381.2                                 186250775 17 - 206538554 CTCAT--------A-TGTGCAT-TA-----CT
i Felis_catus.CM001381.2                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                          185120731 17 - 205367284 CTCAT--------A-TGTGCAT-TA-----CT
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  1373 17 +     25330 CTCAT--------A-TGTGCAT-TA-----CT
i Felis_nigripes.FelNig_flattened_line_44075             I 3 C 0
s Fukomys_damarensis.KN121974.1                            2926235 17 -   3816255 CTGAT--------T-TTTCTGTT-A-----CC
i Fukomys_damarensis.KN121974.1                          I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                5219 17 -     28519 CTTAT--------T-TCTATAT-TA-----CT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2408 17 +    660261 CTTGT--------T-TCTATAT-TA-----CT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 3 C 0
s Glis_glis.GliGli_scaffold_163929                            5234 17 -      6791 CTTAT--------T-TCTCTAT-TA-----CT
i Glis_glis.GliGli_scaffold_163929                       I 3 C 0
s Gorilla_beringei.k141_3218903                                910 17 -      2763 CTTAT--------T-TCTATAT-TA-----CT
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                259330 17 - 186649187 cttat--------t-tctatAT-TA-----CT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    7152 17 -     78134 CTTAT--------T-TCTCTAA-CA-----CT
i Graphiurus_murinus.GraMur_scaffold_10447               I 3 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34408 17 -    327341 CTTAT--------A-TGTGCAT-TA-----CT
i Helogale_parvula.HelPar_flattened_line_2585            I 3 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 16075 17 +     48891 CTTGT--------T-TCTATAT-TA-----CT
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 3 C 0
s Heterocephalus_glaber.JH602082.1                         1938672 17 -  22651954 CATAT--------T-TTTCTGCT-A-----CC
i Heterocephalus_glaber.JH602082.1                       I 3 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6393 17 +      8654 CTTAT--------T-TCTGTAT-TA-----CT
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 3 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11461 17 -     36432 CTTGT--------T-TCTATAT-TA-----CT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 3 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                227 17 -      8370 CCTAT--------A-TGTATAT-TA-----TT
i Hipposideros_galeritus.HipGal_scaffold_108494          I 3 C 0
s Hoolock_leuconedys.ctg274                                    145793 17 -    630532 CTTAT--------T-TCTATAT-TA-----CT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  74071 17 +     83186 CTTAT--------A-TGTGTAT-TA-----CT
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 3 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75608 18 +    143317 TTTAT--------TTTTTCTGTT-A-----CC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3 C 0
s Hylobates_agilis.k141_1155965                               8840 17 +     12352 CTTAT--------T-TCTATAT-TA-----CT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              16027 17 +     55766 CTTAT--------T-TCTATAT-TA-----CT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055555 17 + 191637585 CTTAT--------T-TCTATAT-TA-----CT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804433 17 +  11177569 CTTAT--------T-TCTATAT-TA-----CT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11475 17 -    135385 CGTAT--------T-TTTCTGT-TA-----CC
i Hystrix_cristata.HysCri_scaffold_5660                  I 3 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390724 17 +   7955117 CTTAT--------T-TCTCTAT-TA-----CT
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13527 17 -     16823 CTTGT--------T-TCTGTAT-TA-----CT
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 3 C 0
s Jaculus_jaculus.JH725527.1                               1243209 16 +   9596543 CTCAT--------T-TGT-TAT-TA-----TT
i Jaculus_jaculus.JH725527.1                             I 3 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75365 17 -     97402 CTTGT--------T-TCCGTAT-TA-----CT
i Kogia_breviceps.KogBre_flattened_line_3970             I 3 C 0
s Lagothrix_lagothricha.k141_246028                          45651 17 +    110728 CTTAT--------T-TCTATAT-TA-----CT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1604 17 -     25587 CCTAT--------G-TCTATAT-TA-----CT
i Lasiurus_borealis.LasBor_scaffold_61236                I 3 C 0
s Leontocebus_fuscicollis.k141_3470480                        1096 17 -     23187 CTTAT--------T-TCCGTAT-TA-----CT
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1410 17 -     14280 CTTAT--------T-TCCGTAT-TA-----CT
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                        1050 17 +      3713 CTTAT--------T-TCCGTAT-TA-----CT
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1236 17 +      8855 CTCAT--------T-TCTATAT-TA-----CT
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         6037 17 -     13645 CTCAT--------T-TCTATAT-TA-----CT
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816956 17 -   3914936 CTTAT--------T-TCTGTAT-TA-----CT
i Leptonychotes_weddellii.KB714746.1                     I 3 C 0
s Lepus_americanus.LepAme_scaffold_56121                     23222 17 +     24238 CTTAT--------T-TCTATAT-TA-----CT
i Lepus_americanus.LepAme_scaffold_56121                 I 3 C 0
s Lipotes_vexillifer.KE559953.1                             344709 17 +    662738 CTTGT--------T-TCTGTAT-TA-----CT
i Lipotes_vexillifer.KE559953.1                          I 3 C 0
s Lophocebus_aterrimus.ctg367                               337066 17 -   1826925 CTTAT--------T-TCTATAT-TA-----CT
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39088131 17 +  43346337 CTTAT--------T-TCTATAT-TA-----CT
i Loxodonta_africana.GL010049.1                          I 3 C 0
s Lycaon_pictus.CM007581.1                                41618361 16 +  59628241 CTTAT--------A-TCTGTAT-TT-----C-
i Lycaon_pictus.CM007581.1                               I 3 C 0
s Macaca_arctoides.k141_1757516                              48463 17 -     61512 CTTAT--------T-TCTATAT-TA-----CT
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 376125 17 -  60120075 CTTAT--------T-TCTATAT-TA-----CT
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28393 17 +     30207 CTTAT--------T-TCTATAT-TA-----CT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3231 17 -      5035 CTTAT--------T-TCTATAT-TA-----CT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28346 17 +     30527 CTTAT--------T-TCTATAT-TA-----CT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39522 17 -     50087 CTTAT--------T-TCTATAT-TA-----CT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49267 17 +     51645 CTTAT--------T-TCTATAT-TA-----CT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418469 17 - 187317192 cttat--------t-tctatAT-TA-----CT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402700 17 +  25927173 cttat--------t-tctatAT-TA-----CT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51871 17 -     62418 CTTAT--------T-TCTATAT-TA-----CT
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4402 17 +     14901 CTTAT--------T-TCTATAT-TA-----CT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48344 17 +     59329 CTTAT--------T-TCTATAT-TA-----CT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274251 17 +    668171 CTTAT--------T-TCTATAT-TA-----CT
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2883 17 -      5049 CTTAT--------T-TCTATAT-TA-----CT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 6050 17 +     17132 CTTAT--------T-TCTATAT-TA-----CT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226804 17 -    270270 TCTAT--------A-TCTGTAT-TA-----CT
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 3 C 0
s Mandrillus_leucophaeus.scaffold280                        325533 17 +  24302211 CTTAT--------T-TCTATAT-TA-----CT
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360364 17 -    752769 CTTAT--------T-TCTATAT-TA-----CT
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             676984 17 -    737560 CTTAT--------A-TCTGTAT-TA-----CT
i Manis_javanica.JSZB01003497.1                          I 3 C 0
s Manis_pentadactyla.KN006162.1                             224280 17 +    317179 tttat--------a-tcTGTAT-TA-----CT
i Manis_pentadactyla.KN006162.1                          I 3 C 0
s Marmota_marmota.CZRN01000018.1                           7504924 17 +  40650429 CTTAT--------T-TCTCTAT-TA-----CT
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       154125 22 +    207569 CCTAT--------A-TCTACAT-TCATATCAT
i Megaderma_lyra.MegLyr_scaffold_4542                    I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29698 17 -     74585 CTTAT--------T-TCTGTAT-TA-----CT
i Mellivora_capensis.MelCap_flattened_line_19308         I 3 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53286 15 -    140813 GTCTC--------T-G-T-TAT-TA-----CT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 3 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     90993 17 +     93471 CTTGT--------T-TCTGTAT-TA-----CT
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 3 C 0
s Mico_argentatus.k141_582562                                12646 17 +     17804 CTCAT--------T-TCTATAT-TA-----CT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                373 17 +      5551 CTCAT--------T-TCTATAT-TA-----CT
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21457 17 -     26561 CTCAT--------T-TCTATAT-TA-----CT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49824 17 +    145209 CTTAT--------T-TCTATAT-TA-----CT
i Microgale_talazaci.MicTal_scaffold_6613                I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188725 17 +    200668 CCTGC--------A-TCTATAT-TA-----CT
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 3 C 0
s Microtus_ochrogaster.CM001695.1                         15966714 15 +  27267610 CTCAT--------T-G-T-TAT-TC-----CT
i Microtus_ochrogaster.CM001695.1                        I 3 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368545 17 -   8254450 CCTAT--------A-TCTATAT-TA-----TT
i Miniopterus_natalensis.LDJU01000034.1                  I 3 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46276 17 -     48117 CCTAT--------A-TCTATAT-TA-----TT
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 3 C 0
s Miopithecus_ogouensis.k141_1534655                         25632 17 -     27822 TTTAT--------T-TCTATAT-TA-----CT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12189 17 +     27589 CTTAT--------T-TCTGTAT-TA-----CT
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 3 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   363101 17 +    437263 CTTGT--------T-TCTGTAT-TA-----CT
i Monodon_monoceros.MonMon_M_scaffold_103                I 3 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183170 17 +    366855 CCTGG--------A-TCTATAT-TA-----CT
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32306 17 -     82753 CTTGT--------T-TCTATAT-TA-----CT
i Moschus_moschiferus.MosMos_scaffold_13123              I 3 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   22158 17 -     63510 CTTAT--------A-TGTGCAT-TA-----CT
i Mungos_mungo.MunMun_flattened_line_18455               I 3 C 0
s Murina_feae.MurFea_scaffold_17764                          45533 17 +     47283 CTTAT--------A-TCTATAT-TA-----CT
i Murina_feae.MurFea_scaffold_17764                      I 3 C 0
s Mus_caroli.LT608237.1                                   35597906 15 + 120012414 CTCAT--------T-G-T-TAT-TA-----CT
i Mus_caroli.LT608237.1                                  I 3 C 0
s Mus_musculus.chr8                                       41691448 15 + 129401213 CTCAT--------T-G-T-TAT-TA-----CT
i Mus_musculus.chr8                                      I 3 C 0
s Mus_pahari.LT608297.1                                   58219407 15 +  89631738 CTCAT--------T-G-T-TAT-TA-----CT
i Mus_pahari.LT608297.1                                  I 3 C 0
s Mus_spretus.CM004101.1                                  39500367 15 + 130317789 CTCAT--------T-G-T-TAT-TA-----CT
i Mus_spretus.CM004101.1                                 I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3248 17 -    124358 CTTAT--------T-TCTCTGT-TA-----CC
i Muscardinus_avellanarius.MusAve_scaffold_5560          I 3 C 0
s Mustela_putorius.JH418006.1                             14358648 17 +  14710649 CTTAT--------T-TCTGTAT-TA-----CT
i Mustela_putorius.JH418006.1                            I 3 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1330 17 -     27262 CTTAC--------T-CTTATGTT-A-----CC
i Myocastor_coypus.MyoCoy_scaffold_57531                 I 3 C 0
s Myotis_brandtii.KE162005.1                               9797538 17 +  10118263 CCTAT--------A-TCTATAT-TA-----CT
i Myotis_brandtii.KE162005.1                             I 3 C 0
s Myotis_davidii.KB100139.1                                4391712 17 +   6019432 CCTAT--------A-TCTATAT-TA-----CT
i Myotis_davidii.KB100139.1                              I 3 C 0
s Myotis_lucifugus.GL429869.1                               387751 17 +   4330536 CCTAT--------A-TCTATAT-TA-----CT
i Myotis_lucifugus.GL429869.1                            I 3 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6538 17 +     18357 CCTAT--------A-TCTATAT-TA-----CC
i Myotis_myotis.MyoMyo_scaffold_66571                    I 3 C 0
s Nannospalax_galili.KL204047.1                             950303 16 +   3037898 CTCAT--------T-TGT-TAT-TA-----CT
i Nannospalax_galili.KL204047.1                          I 3 C 0
s Nasalis_larvatus.k141_1350636                              32417 17 +     34575 CTTAT--------T-TCTGTAC-TA-----CT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469636 17 -  31847680 CTTAT--------T-TCTGTAT-TA-----CT
i Neomonachus_schauinslandi.NINY01007730.1               I 3 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235759 17 -   7148211 CTTGT--------T-TCTGTAT-TA-----CT
i Neophocaena_asiaeorientalis.KZ687982.1                 I 3 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131450 17 -    149072 TCTAT--------A-TCTATAT-TA-----CT
i Noctilio_leporinus.NocLep_scaffold_7894                I 3 C 0
s Nomascus_annamensis.k141_1771965                           56728 17 -    132029 CTTAT--------T-TCTATAT-TA-----CT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12823 17 -     16345 CTTAT--------T-TCTATAT-TA-----CT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18712 17 +     22201 CTTAT--------T-TCTATAT-TA-----CT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416942 17 -  22158432 CTTAT--------T-TCTATAT-TA-----CT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29117 17 -     54323 CTTAT--------T-TCTATAT-TA-----CT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                202066 16 +   9404916 CTTAT--------A-TCTGTAT-TT-----C-
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 3 C 0
s Octodon_degus.JH651603.1                                11059604 17 -  11899542 CTTAT--------T-TTTCTGTT-A-----CC
i Octodon_degus.JH651603.1                               I 3 C 0
s Odobenus_rosmarus.KB229312.1                             1455405 17 +   2017862 CTTAT--------T-TCTGTAT-TA-----CT
i Odobenus_rosmarus.KB229312.1                           I 3 C 0
s Odocoileus_virginianus.KZ100018.1                         442702 17 -    630418 CTTGT--------T-TCTATAT-TA-----CT
i Odocoileus_virginianus.KZ100018.1                      I 3 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22359 17 +    150152 CTTGT--------T-TCTATAT-TA-----CT
i Okapia_johnstoni.LVCL01S0005463.1                      I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97331 15 -    140218 ATCAT--------T-G-T-TAT-TA-----CT
i Ondatra_zibethicus.OndZib_scaffold_7387                I 3 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7874 15 -     41509 TTCAC--------T-G-T-TAT-TA-----CT
i Onychomys_torridus.OnyTor_scaffold_28377               I 3 C 0
s Orcinus_orca.KB316932.1                                  8106172 17 +  10937097 CTTGT--------T-TTTTTAT-TA-----CT
i Orcinus_orca.KB316932.1                                I 3 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3162 17 +     11607 CTTAT--------T-TCTATAT-TA-----CT
i Orycteropus_afer.OryAfe_flattened_line_201229          I 3 C 0
s Oryctolagus_cuniculus.CM000791.1                       107109511 17 - 174332312 CTTAT--------T-TCTATAT-TA-----GT
i Oryctolagus_cuniculus.CM000791.1                       I 3 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        43016 16 +    559221 CTTAT--------A-tctgtat-tt-----c-
i Otocyon_megalotis.JAEUCK010005147.1                    I 3 C 0
s Ovis_aries.CM001607.2                                   26411101 17 -  44047080 CTTGT--------T-TCTATAT-TA-----CT
i Ovis_aries.CM001607.2                                  I 3 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11724 17 +     17875 CTTGT--------T-TCTATAT-TA-----CT
i Ovis_canadensis.OviCan_scaffold_67953                  I 3 C 0
s Pan_paniscus.AJFE02001037.1                                  689 17 +      1186 cttac--------t-tcTATAT-TA-----CT
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.KZ622849.1                                 38084 17 -    110857 cttat--------t-tctatAT-TA-----CT
i Pan_troglodytes.KZ622849.1                             I 52 I 27
s Panthera_onca.PanOnc_flattened_line_3271                   28705 17 -    230217 CTCAT--------A-TGTGCAT-TA-----CT
i Panthera_onca.PanOnc_flattened_line_3271               I 3 C 0
s Panthera_pardus.KV860321.1                              18465946 17 -  18783137 CTCAT--------A-TGTGCAT-TA-----CT
i Panthera_pardus.KV860321.1                             I 3 C 0
s Panthera_tigris.KE722367.1                               3976545 17 +   8748460 CTCAT--------A-TGTGCAT-TA-----CT
i Panthera_tigris.KE722367.1                             I 3 C 0
s Pantholops_hodgsonii.KE114653.1                          1622619 17 +   2937107 CTTGT--------T-TCTATAT-TA-----CT
i Pantholops_hodgsonii.KE114653.1                        I 3 C 0
s Papio_anubis.CM001495.2                                   246548 17 - 183742232 cttat--------t-tctatAT-TA-----CT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12833 17 +     21308 CTTAT--------T-TCTATAT-TA-----CT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295576 17 -  20919399 CTTAT--------T-TCTATAT-TA-----CT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25475 17 -     27687 CTTAT--------T-TCTATAT-TA-----CT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2152 17 +     10553 CTTAT--------T-TCTATAT-TA-----CT
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  2113 17 -     10386 CTTAT--------T-TCTATAT-TA-----CT
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18826 17 +     78924 CTTAT--------A-TGTGCAT-TA-----CT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7652 17 +      9367 CTCAT--------C-TGTCTAT-TA-----CC
i Perognathus_longimembris.PerPac_flattened_line_89005   I 3 I 2
s Petromus_typicus.PetTyp_scaffold_17301                     35661 25 -     56120 TTTTTTTTTTTTTT-TTTTGGTT-A-----CC
i Petromus_typicus.PetTyp_scaffold_17301                 I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7693 17 -     63832 CTTGT--------T-TCTGTAT-TA-----CT
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 3 C 0
s Piliocolobus_badius.k141_2704958                            5798 17 +     55023 CTTAT--------T-TCTATAC-TA-----CT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5321 17 -     89929 CTTAT--------T-TCTATAC-TA-----CT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5909 17 +     40849 CTTAT--------T-TCTATAC-TA-----CT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257638 17 +  14605196 cttat--------t-tctatAC-TA-----CT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             8028 17 +     22231 CCTAT--------A-TCTATAT-TA-----CT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 3 C 0
s Pithecia_albicans.k141_1239476                             67163 17 +    207309 CTTAT--------T-TCTATAT-TA-----CT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8258 17 -     25401 CTTAT--------T-TCTATAT-TA-----CT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               34004 17 +     58159 CTTAT--------T-TCTATAT-TA-----CT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34280 17 +     63561 CTTAT--------T-TCTATAT-TA-----CT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           34035 17 +     51148 CTTAT--------T-TCTATAT-TA-----CT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              559011 17 -   4542175 CTTAT--------T-TCTATAT-TA-----CT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           34019 17 +     51125 CTTAT--------T-TCTATAT-TA-----CT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4941 17 +     19503 CTTGT--------T-TCTGTAT-TA-----CT
i Platanista_gangetica.PlaMin_flattened_line_83166       I 3 C 0
s Plecturocebus_bernhardi.k141_2549090                       10451 17 +     39866 CTTAT--------T-TCTATAT-TA-----CT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5533 17 -      9282 CTTAT--------T-TCTATAT-TA-----CT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44937 17 -     87950 CTTAT--------T-TCTATAT-TA-----CT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45331 17 -     88961 CTTAT--------T-TCTATAT-TA-----CT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10029 17 -     39403 CTTAT--------T-TCTATAT-TA-----CT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44981 17 +     87928 CTTAT--------T-TCTATAT-TA-----CT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         10028 17 -     60166 CTTAT--------T-TCTATAT-TA-----CT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16949 17 -     67232 CTTAT--------T-TCTATAT-TA-----CT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44881 17 -     90634 CTTAT--------T-TCTATAT-TA-----CT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46348 17 +     89403 CTTAT--------T-TCTATAT-TA-----CT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182490 17 - 189387572 cttat--------t-tctatAT-TA-----CT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197232 17 -   9816681 CTTAT--------T-TCTATAT-TA-----CT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              30996 17 +     69807 CTTAT--------T-TCTATAC-TA-----CT
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48179 17 -     80239 CTTAT--------T-TCTATAC-TA-----CT
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2925 17 -     12774 CTTAT--------T-TCTGTAT-TA-----CT
i Procavia_capensis.ProCapCap_scaffold_128773            I 3 C 0
s Psammomys_obesus.NESX01036366.1                            40819 15 +     52041 GTCTT--------T-G-T-TAT-TA-----CT
i Psammomys_obesus.NESX01036366.1                        I 3 C 0
s Pteronotus_parnellii.KE847780.1                            55808 17 -     66298 CCTGT--------A-TCTATAT-TA-----CT
i Pteronotus_parnellii.KE847780.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8183 17 -     18639 CTTAT--------T-TCTGTAT-TA-----CT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 3 C 0
s Pteropus_alecto.KB030862.1                               5844381 15 -  28871421 CCTAT--------A-TCT--AT-TA-----CT
i Pteropus_alecto.KB030862.1                             I 3 C 0
s Pteropus_vampyrus.KN525825.1                             3540897 15 -   4952924 CCTAT--------A-TCT--AT-TA-----CT
i Pteropus_vampyrus.KN525825.1                           I 3 C 0
s Puma_concolor.QAVW01001104.1                            18102937 17 +  38429054 CTCAT--------A-TGTGCAT-TA-----CT
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                             30365 17 +     91421 CTTAT--------T-TCTATAC-TA-----CT
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156916 17 -   7812017 CTTAT--------T-TCTATAC-TA-----CT
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11216 17 +     72585 CTTAT--------T-TCTATAC-TA-----CT
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5220 17 -     55207 CTTGT--------T-TCTATAT-TA-----CT
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 3 C 0
s Rattus_norvegicus.chr16                                 37026023 13 -  90668790 --CAT--------T-G-T-TAT-TA-----CT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918278 17 +   3329780 CCTAT--------A-TCTATAT-TA-----TT
i Rhinolophus_sinicus.LVEH01000134.1                     I 3 C 0
s Rhinopithecus_bieti.k119_778604                             4822 17 +      7119 CTTAT--------T-TCTATAC-TA-----CT
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125492 17 + 195417433 cttat--------t-tctatAC-TA-----CT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239664 17 -   7961872 CTTAT--------T-TCTATAC-TA-----CT
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79125 17 -    116970 CGTAT--------A-TCTTTAT-CA-----GT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 5 C 0
s Saguinus_bicolor.k141_161125                                9723 17 +     12412 CTTAT--------T-TCCGTAT-TA-----CT
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                              1045 17 +      9876 CTTAT--------T-TCCGTAT-TA-----CT
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16641 17 -     24931 CTTAT--------T-TCCGTAT-TA-----CT
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1520 17 +      4564 CTTAT--------T-TCCGTAT-TA-----CT
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4325 17 -      7443 CTTAT--------T-TCCGTAT-TA-----CT
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395358 17 - 209938924 CTTAT--------T-TCCGTAT-TA-----CT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1942 17 +     10149 CTTAT--------T-TCCGTAT-TA-----CT
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1286 17 +     10417 CCTAT--------T-TCCGTAT-TA-----CT
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14671 17 +     16473 CTTGT--------T-TCTATAT-TA-----CT
i Saiga_tatarica.SaiTat_scaffold_39512                   I 3 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111410 17 + 121099817 cttat--------t-tctatAT-TA-----CT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32979 17 -     47369 CTTAT--------T-TCTATAT-TA-----CT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33362 17 -     79414 CTTAT--------T-TCTATAT-TA-----CT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              30053 17 -     34454 CTTAT--------T-TCTATAT-TA-----CT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17455 17 -     22428 CTTAT--------T-TCTATAT-TA-----CT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32609 17 -     47109 CTTAT--------T-TCTATAT-TA-----CT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240633 17 +   5703754 CTTAT--------T-TCTATAT-TA-----CT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10224 17 +     21866 CTTAT--------T-TCTATAT-TA-----CT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122716 17 +    313613 ATAAT--------T-TCTATAT-TA-----CT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 3 C 0
s Semnopithecus_entellus.k141_583282                          1796 17 +     11297 CTTAT--------T-TCTATAC-TA-----CT
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32189 17 +     58920 CTTAT--------T-TCTATAC-TA-----CT
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18687 17 -     45317 CTTAT--------T-TCTATAC-TA-----CT
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26345 17 -     42441 CTTAT--------T-TCTATAC-TA-----CT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1669243                      3994  9 -      6251 -----------------TATAC-TA-----CT
i Semnopithecus_schistaceus.k141_1669243                 N 0 C 0
s Semnopithecus_vetulus.k141_244474                          32109 17 -     48123 CTTAT--------T-TCTATAC-TA-----CT
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52876 15 +     77746 TTTAT--------T-A-C-TAT-TA-----CC
i Sigmodon_hispidus.SigHis_scaffold_20193                I 3 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867487 17 -   1910179 ATTAT--------T-TCTATAT-TA-----CT
i Solenodon_paradoxus.SolPar_flattened_line_126          I 3 C 0
s Sorex_araneus.JH798187.1                                 4674696 17 +  18376816 ATTGT--------T-TGAATAT-TA-----CT
i Sorex_araneus.JH798187.1                               I 3 C 0
s Spermophilus_dauricus.KZ294078.1                         1872287 17 +   3870691 CTTAT--------T-TCTCTAT-TA-----CT
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16401 17 -     97271 CTTAT--------T-TCTGTAT-TA-----CT
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             129034 17 +    196729 TTTAT--------A-TGTGCAT-TA-----CT
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 C 0
s Sus_scrofa.CM000828.4                                    6648312 17 +  69701581 CTTGT--------T-TCTATAT-TA-----CT
i Sus_scrofa.CM000828.4                                  I 3 C 0
s Symphalangus_syndactylus.tarseq_199                       394199 17 +   1523678 CTTAT--------T-TCTATAT-TA-----CT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17745 17 +     22964 CCTAT--------A-TCTATAT-TA-----CT
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 3 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      195145 17 +    199430 CTTCT--------A-GCTATAT-CA-----CT
i Tapirus_indicus.TapInd_scaffold_7432                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    109125 17 -    539355 CTTCT--------A-GCTATAT-CA-----CT
i Tapirus_terrestris.TapTer_scaffold_755                 I 3 C 0
s Tarsius_lariang.k141_1733899                                4746  7 +      9917 CATAT--------T-A----------------
i Tarsius_lariang.k141_1733899                           I 1 I 2
s Tarsius_wallacei.k141_226975                               11542  7 +     20590 CATAT--------T-A----------------
i Tarsius_wallacei.k141_226975                           I 1 I 2
s Theropithecus_gelada.CM009954.1                           356359 17 - 186847797 cttat--------t-tctatAT-TA-----CT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27976 16 -     33621 CTT-T--------T-TTTTTGTT-A-----CC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 3 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22719 17 -     31044 CTTAT--------T-TCTGTAT-TA-----CT
i Tolypeutes_matacus.TolMat_scaffold_31955               I 3 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    484055 17 -    610378 CCTGT--------A-TCTATAT-TA-----CT
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_1189070                        24098 17 +     26378 CTTAT--------T-TCTATAC-TA-----CT
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36896 17 -     78344 CTTAT--------T-TCTATAC-TA-----CT
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23423 17 +     25722 CTTAT--------T-TCTATAC-TA-----CT
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31852 17 -     62838 CTTAT--------T-TCTATAC-TA-----CT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31843 17 +     46913 CTTAT--------T-TCTATAC-TA-----CT
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12581 17 -     28527 CTTAT--------T-TCTATAC-TA-----CT
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33783 17 -     64340 CTTAT--------T-TCTATAC-TA-----CT
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31821 17 -     63452 CTTAT--------T-TCTATAC-TA-----CT
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13272 17 +     22490 CTTAT--------T-TCTATAC-TA-----CT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1238 17 +      9911 CTTAT--------T-TCTATAC-TA-----CT
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                         1033 17 -     33539 CTTAT--------T-TCTATAC-TA-----CT
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258792 17 -   6242583 CTTAT--------T-TCTATAC-TA-----CT
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4811 17 +     19340 CTTAT--------T-TCTATAC-TA-----CT
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177929 17 -    200418 CTTGT--------T-TCTATGC-TA-----CT
i Tragulus_javanicus.TraJav_scaffold_3462                I 3 C 0
s Trichechus_manatus.JH594705.1                            6485729 17 -  10818551 TTTAT--------T-TCTATAT-TA-----CT
i Trichechus_manatus.JH594705.1                          I 3 C 0
s Tupaia_chinensis.KB320699.1                              1839979 17 -   4065304 attat--------t-tctgtat-ta-----tt
i Tupaia_chinensis.KB320699.1                            I 273 C 0
s Tupaia_tana.TupTan_flattened_line_394                      14050 17 -     70247 ATTAT--------T-TCTGTAT-TA-----TT
i Tupaia_tana.TupTan_flattened_line_394                  I 266 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369296 17 -  33153633 CTTGT--------T-TCTGTAT-TA-----CT
i Tursiops_truncatus.MRVK01000835.1                      I 3 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7486 16 -     21056 GTAAT--------T-T-TATAT-TA-----CT
i Uropsilus_gracilis.UroGra_scaffold_46687               I 3 C 0
s Ursus_maritimus.KK499267.1                                185609 16 +   5085361 -TTAT--------T-TCTGTAT-TA-----CT
i Ursus_maritimus.KK499267.1                             I 3 C 0
s Vicugna_pacos.KN270157.1                                   80429 17 +   5488506 CTTAT--------T-TCTATAC-TA-----CT
i Vicugna_pacos.KN270157.1                               I 3 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108960 16 -    112863 CTTAT--------A-TCTGTAT-TT-----C-
i Vulpes_lagopus.VulLag_flattened_line_12041             I 3 C 0
s Xerus_inauris.XerIna_scaffold_2302                        178154 17 -    224448 CTTGT--------T-TCTCTAT-TA-----TT
i Xerus_inauris.XerIna_scaffold_2302                     I 5 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32611 17 -     86975 CTTAT--------T-TCTGTAT-TA-----CT
i Zalophus_californianus.ZalCal_flattened_line_17732     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       4659 16 -     63895 CTCAT--------T-TGT-TAT-TA-----CT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 3 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1258 17 +      3447 CTTGT--------T-TCTGTAT-TA-----CT
i Ziphius_cavirostris.ZipCav_flattened_line_334639       I 3 C 0
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Peromyscus_maniculatus.KI615324.1                         251088  3 +  18517816 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      10174 2 +     36723 AA
s Acinonyx_jubatus.LLWD01001279.1                           816714 2 +   1699592 AA
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     28906 2 +     63021 AA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419171 2 +  29979442 AA
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            219170 2 +    347723 AA
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    21678 2 -     61208 AA
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   51122 2 +     53615 AA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3150 2 +     13857 AA
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19706 2 -     21945 AA
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21391 2 +     32033 AA
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74646 2 -     84148 AA
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46900 2 -     78289 AA
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46316 2 +     55831 AA
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44778 2 -     64179 AA
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1881 2 -      3959 AA
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43403 2 +     45454 AA
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              49052 2 +     70886 AA
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11222 2 +     30854 AA
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35358 2 +     42133 AA
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592377 2 +   2318259 AA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180782 2 -    412891 AA
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53533 2 -     68529 AA
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3563 2 +     17741 AA
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4188 2 -     15923 AA
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674470 2 +   5030052 AA
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4464 2 -     16391 AA
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               4023 2 -     17186 AA
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27631 2 -     32367 AA
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9297 2 -     15198 AA
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               277121 2 +  21539123 AA
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13286 2 +     48076 AA
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8422 2 -     28759 AA
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35978 2 +     44353 AA
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51348 2 -     71267 AA
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25406 2 -     33135 AA
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7967028 2 -  23207421 AA
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3529 2 -     25979 AA
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93364 2 +    124022 AA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36553 2 +    288883 AA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423706 2 -  48749331 AA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      769307 2 +   1948126 AA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559852 2 -  45695690 AA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536533 2 -   4408762 AA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                  10200 2 +     28062 AA
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45491 2 -     91139 AA
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  23018 2 +     95584 AA
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22931 2 +    119600 AA
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12554 2 +     18648 GA
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             12057 2 -     13885 AA
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            4268 2 -      8861 GA
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456610 2 + 189096842 GA
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               4184 2 +      8664 GA
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7635072 2 +  17673402 AA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4669373 2 +   7040546 AA
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1213071 2 +   1652518 AA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42509109 2 +  60362399 AA
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12744 2 -     23171 AA
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          226085 2 +   9314153 AA
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41619222 2 +  59632846 AA
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110803 2 -  63665305 AA
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416381 2 -  46296322 AA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598378 2 +  44709034 AA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2289 2 -     20114 AA
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274564 2 +    496798 AA
i Carlito_syrichta.NW_007259797.1                        I 2 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               4170 2 +      9923 AA
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31661 2 -     39886 AA
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83381 2 -    217609 AA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              5000256 2 +  23392119 aA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5003697 2 +  23407841 aA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          582 2 -    143979 AA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_niveiventris.k141_592277                           7525 2 -     12580 GA
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45634 2 +     53515 GC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376260 2 -  26074798 AA
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10329 2 -     34880 AA
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69427 2 -     89041 AA
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2227 2 -     76265 AA
i Cephalopachus_bancanus.k141_1140705                    I 2 C 0
s Ceratotherium_simum.JH767749.1                          15495703 2 -  27778364 AA
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22536 2 +     27315 AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                144206 2 -   4669795 AA
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                          180 2 +      3297 AA
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3378 2 -     14410 AA
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47760 2 -    148725 AA
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        30037 2 -     40656 AA
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9996 2 +     20796 AA
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            15110 2 -     17524 AA
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30843 2 -     34525 AA
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14621 2 -     25376 AA
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367210 2 -  39242232 AA
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272935 2 +  21565898 AA
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35302 2 -     45857 AA
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30203 2 -     32606 AA
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6358 2 +      8499 AA
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28763 2 +     70610 AA
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25725 2 +     36323 AA
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15627 2 -     19938 AA
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            11294 2 -     32913 AA
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21707 2 -     40346 AA
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21961 2 +    216457 AA
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21751 2 +     39636 AA
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33843 2 -     52013 AA
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44831 2 -    112038 AA
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10381 2 +     34062 AA
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346625 2 +  18827391 AA
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13164 2 -     44032 AA
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            308011 2 - 135778131 AA
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2303 2 +     10270 AA
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            609780 2 -    839153 AA
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2549 2 -      4087 AA
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412419 2 -   2368649 AA
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382301 2 - 200372422 AA
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5854 2 -     84244 AA
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810882 2 +  53390261 AA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6451 2 -      8242 AA
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47599 2 -     83289 AA
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213119117 2 - 224834208 AA
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_205242                37 2 +      5812 AA
i Crocidura_indochinensis.CroInd_scaffold_205242         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              8053 2 +     87169 AA
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650336 2 -   1526836 AA
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22961 2 +     50838 AA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12449 2 +     36344 AA
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31890 2 +     75252 AA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2113370 2 -   2246927 GA
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635440 2 -  35494412 AA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11869163 2 -  20541912 GA
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667974 2 -   1390856 AA
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142779 2 -    198055 AA
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_341948                   55 2 -      1676 AA
i Dolichotis_patagonum.DolPat_scaffold_341948            I 20 C 0
s Echinops_telfairi.JH980293.1                            62858660 2 - 111700974 AA
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9848 2 +     19438 AA
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       246167 2 -    607251 AA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9114011 2 -  10337057 AA
i Elephantulus_edwardii.JH947257.1                       I 312 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35322 2 +    110024 AA
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           17243 2 +     18970 AA
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925703 2 +  41312741 AA
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582934 2 +  14770903 AA
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045441 2 -   4378816 AA
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379371 2 +  39960074 AA
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415353 2 -    498745 AA
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671641 2 +   7059049 AA
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               266153 2 +  21539334 AA
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74643 2 -    133382 AA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2365 2 +     25849 AA
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250792 2 - 206538554 AA
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120748 2 - 205367284 AA
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  1390 2 +     25330 AA
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2926252 2 -   3816255 GA
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                5236 2 -     28519 AA
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2425 2 +    660261 AA
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            5251 2 -      6791 AA
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                927 2 -      2763 AA
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                259347 2 - 186649187 AA
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    7169 2 -     78134 AA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34425 2 -    327341 AA
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 16092 2 +     48891 AA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938689 2 -  22651954 AA
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6410 2 +      8654 GA
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11478 2 -     36432 AA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                244 2 -      8370 AA
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145810 2 -    630532 AA
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  74088 2 +     83186 AA
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75626 2 +    143317 AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               8857 2 +     12352 AA
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              16044 2 +     55766 AA
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055572 2 + 191637585 AA
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804450 2 +  11177569 AA
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11492 2 -    135385 AA
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390741 2 +   7955117 AA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13544 2 -     16823 AA
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1243225 2 +   9596543 AA
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75382 2 -     97402 AA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45668 2 +    110728 AA
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1621 2 -     25587 AA
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                        1113 2 -     23187 AA
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1427 2 -     14280 AA
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                        1067 2 +      3713 AA
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1253 2 +      8855 GA
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         6054 2 -     13645 GA
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816973 2 -   3914936 AA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     23239 2 +     24238 AA
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344726 2 +    662738 AA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               337083 2 -   1826925 AA
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39088148 2 +  43346337 AA
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618377 2 +  59628241 AA
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48480 2 -     61512 AA
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 376142 2 -  60120075 AA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28410 2 +     30207 AA
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3248 2 -      5035 AA
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28363 2 +     30527 AA
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39539 2 -     50087 AA
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49284 2 +     51645 AA
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418486 2 - 187317192 AA
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402717 2 +  25927173 AA
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51888 2 -     62418 AA
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4419 2 +     14901 AA
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48361 2 +     59329 AA
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274268 2 +    668171 AA
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2900 2 -      5049 AA
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 6067 2 +     17132 AA
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226821 2 -    270270 AA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325550 2 +  24302211 AA
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360381 2 -    752769 AA
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             677001 2 -    737560 GA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             224297 2 +    317179 AA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504941 2 +  40650429 AA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       154147 2 +    207569 AA
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29715 2 -     74585 AA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53301 2 -    140813 GA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     91010 2 +     93471 AA
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12663 2 +     17804 GA
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                390 2 +      5551 GA
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21474 2 -     26561 GA
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49841 2 +    145209 AA
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188742 2 +    200668 AA
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966729 2 +  27267610 AA
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368562 2 -   8254450 AA
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46293 2 -     48117 AA
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25649 2 -     27822 AA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12206 2 +     27589 AA
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   363118 2 +    437263 AA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183187 2 +    366855 AA
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32323 2 -     82753 AA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   22175 2 -     63510 AA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45550 2 +     47283 AA
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35597921 2 + 120012414 AA
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41691463 2 + 129401213 AA
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58219422 2 +  89631738 AA
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39500382 2 + 130317789 AA
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3265 2 -    124358 AA
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358665 2 +  14710649 AA
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1347 2 -     27262 AA
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797555 2 +  10118263 AA
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391729 2 +   6019432 AA
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387768 2 +   4330536 AA
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6555 2 +     18357 AA
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950319 2 +   3037898 AA
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              32434 2 +     34575 AA
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469653 2 -  31847680 AA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235776 2 -   7148211 AA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131467 2 -    149072 AA
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56745 2 -    132029 AA
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12840 2 -     16345 AA
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18729 2 +     22201 AA
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416959 2 -  22158432 AA
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29134 2 -     54323 AA
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                202082 2 +   9404916 AA
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059621 2 -  11899542 AA
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1455422 2 +   2017862 AA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442719 2 -    630418 AA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22376 2 +    150152 AA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97346 2 -    140218 AA
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7889 2 -     41509 AA
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8106189 2 +  10937097 AA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3179 2 +     11607 AA
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107109528 2 - 174332312 AA
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        43032 2 +    559221 aa
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 212
s Ovis_aries.CM001607.2                                   26411118 2 -  44047080 AA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11741 2 +     17875 AA
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  706 2 +      1186 AA
i Pan_paniscus.AJFE02001037.1                            C 0 C 0
s Pan_troglodytes.CM009242.2                               1477326 2 - 189151597 AA
i Pan_troglodytes.CM009242.2                             I 17 I 43
s Panthera_onca.PanOnc_flattened_line_3271                   28722 2 -    230217 AA
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18465963 2 -  18783137 AA
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976562 2 +   8748460 AA
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622636 2 +   2937107 AA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246565 2 - 183742232 AA
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12850 2 +     21308 AA
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295593 2 -  20919399 AA
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25492 2 -     27687 AA
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2169 2 +     10553 AA
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  2130 2 -     10386 AA
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18843 2 +     78924 AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35686 2 -     56120 AA
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7710 2 -     63832 AA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5815 2 +     55023 AA
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5338 2 -     89929 AA
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5926 2 +     40849 AA
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257655 2 +  14605196 AA
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             8045 2 +     22231 AA
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             67180 2 +    207309 AA
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8275 2 -     25401 AA
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               34021 2 +     58159 AA
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34297 2 +     63561 AA
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           34052 2 +     51148 AA
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              559028 2 -   4542175 AA
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           34036 2 +     51125 AA
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4958 2 +     19503 AA
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10468 2 +     39866 AA
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5550 2 -      9282 AA
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44954 2 -     87950 AA
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45348 2 -     88961 AA
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10046 2 -     39403 AA
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          44998 2 +     87928 AA
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         10045 2 -     60166 AA
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16966 2 -     67232 AA
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44898 2 -     90634 AA
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46365 2 +     89403 AA
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182507 2 - 189387572 AA
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197249 2 -   9816681 AA
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              31013 2 +     69807 AA
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48196 2 -     80239 AA
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2942 2 -     12774 GA
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Psammomys_obesus.NESX01036366.1                            40834 2 +     52041 GA
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55825 2 -     66298 AA
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8200 2 -     18639 AA
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844396 2 -  28871421 AA
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540912 2 -   4952924 AA
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18102954 2 +  38429054 AA
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             30382 2 +     91421 AA
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156933 2 -   7812017 AA
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11233 2 +     72585 AA
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5237 2 -     55207 AA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37026036 2 -  90668790 AA
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918295 2 +   3329780 AA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4839 2 +      7119 AA
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125509 2 + 195417433 AA
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239681 2 -   7961872 AA
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79142 2 -    116970 AA
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9740 2 +     12412 AA
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                              1062 2 +      9876 AA
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16658 2 -     24931 AA
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1537 2 +      4564 AA
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4342 2 -      7443 AA
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395375 2 - 209938924 AA
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1959 2 +     10149 AA
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1303 2 +     10417 AA
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14688 2 +     16473 AA
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111427 2 + 121099817 AA
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32996 2 -     47369 AA
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33379 2 -     79414 AA
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              30070 2 -     34454 AA
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17472 2 -     22428 AA
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32626 2 -     47109 AA
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240650 2 +   5703754 AA
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10241 2 +     21866 AA
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122733 2 +    313613 AA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1813 2 +     11297 AA
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32206 2 +     58920 AA
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18704 2 -     45317 AA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26362 2 -     42441 AA
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1669243                      4003 2 -      6251 AA
i Semnopithecus_schistaceus.k141_1669243                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          32126 2 -     48123 AA
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52891 2 +     77746 AA
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867504 2 -   1910179 AA
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674713 2 +  18376816 AA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1872304 2 +   3870691 AA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16418 2 -     97271 GA
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             129051 2 +    196729 AA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6648329 2 +  69701581 AA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       394216 2 +   1523678 AA
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17762 2 +     22964 AA
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      195162 2 +    199430 AA
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    109142 2 -    539355 AA
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4755 2 +      9917 AA
i Tarsius_lariang.k141_1733899                           I 2 C 0
s Tarsius_wallacei.k141_226975                               11551 2 +     20590 AA
i Tarsius_wallacei.k141_226975                           I 2 C 0
s Theropithecus_gelada.CM009954.1                           356376 2 - 186847797 AA
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27992 2 -     33621 AG
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22736 2 -     31044 AA
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    484072 2 -    610378 AA
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        24115 2 +     26378 AA
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36913 2 -     78344 AA
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23440 2 +     25722 AA
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31869 2 -     62838 AA
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31860 2 +     46913 AA
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12598 2 -     28527 AA
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33800 2 -     64340 AA
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31838 2 -     63452 AA
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13289 2 +     22490 AA
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1255 2 +      9911 AA
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                         1050 2 -     33539 AA
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258809 2 -   6242583 AA
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4828 2 +     19340 AA
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177946 2 -    200418 AA
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485746 2 -  10818551 AA
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1839996 2 -   4065304 aa
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      14067 2 -     70247 AA
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369313 2 -  33153633 AA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7502 2 -     21056 AA
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185625 2 +   5085361 AA
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   80446 2 +   5488506 AA
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                108976 2 -    112863 AA
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        178171 2 -    224448 AA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32628 2 -     86975 AA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       4675 2 -     63895 GC
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1275 2 +      3447 AA
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_89005        7669 2 +      9367 I
e Dipodomys_stephensi.DipSte_scaffold_77284                   1063 0 +     14058 C
e Dipodomys_ordii.KN672350.1                              18955459 0 -  37912305 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Peromyscus_maniculatus.KI615324.1                         251088 3 +  18517816 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      10176 25 +     36723 A--TTATTCAT---GGAGCCC----G-ACTCTTCT
s Acinonyx_jubatus.LLWD01001279.1                           816716 23 +   1699592 A--TGGTTCACAA-GGATCC----AA-ATTC----
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 4
s Acomys_cahirinus.AcoCah_scaffold_21377                     28908 21 +     63021 A--TGTGTCCTAA-GGAGCC----AA-GT------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419173 23 +  29979442 A--TGATTCATAA-GGATCC----AA-GTTC----
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 4
s Ailurus_fulgens.LNAC01001112.1                            219172 23 +    347723 A--TGATTCACAA-GGATCC----AA-GTTC----
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 4
s Allactaga_bullata.AllBul_scaffold_20030                    21680 20 -     61208 A--TGATTTATAA-G-GGAC----AT-AT------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 6
s Allenopithecus_nigroviridis.k141_3755588                   51124 27 +     53615 A--TTATTCTTTA-GGAACCA----G-ACTCTTCA
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3152 27 +     13857 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19708 27 -     21945 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21393 27 +     32033 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74648 27 -     84148 A--TTATTCATTA-GGAGCCA----G-ACTCTCCT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46902 27 -     78289 A--TTATTCATTA-GGAGCCA----G-ACTCTCCT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46318 27 +     55831 A--TTATTCATTA-GGAGCCA----G-ACTCTCCT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44780 27 -     64179 A--TTATTCATTA-GGAGCCA----G-ACTCTCCT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1883 27 -      3959 A--TTATTCATTA-GGAGCCA----G-ACTCTCCT
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43405 27 +     45454 A--TTATTCATTA-GGATCCA----G-ACTCTCCT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              49054 27 +     70886 A--TTATTCATTA-GGAGCCA----G-ACTCTCCT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11224 27 +     30854 A--TTATTCATTA-GGAGCCA----G-ACTCTCCT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35360 27 +     42133 A--TTATTCATTA-GGAGCCA----G-ACTCTCCT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592379 23 +   2318259 A--TGATTCATAA-GAAGCC----AA-ATTC----
i Ammotragus_lervia.NIVO01071767.1                       C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_1412                      180784 23 -    412891 A--TGATTCATAA-GGAGCC----AG-CTTC----
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 I 4
s Antilocapra_americana.AntAmePen_scaffold_21030             53535 23 -     68529 A--TGATTCATAA-GGAGCC----AA-ATTC----
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 I 4
s Aotus_azarae.k141_887050                                    3565 27 +     17741 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4190 27 -     15923 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674472 27 +   5030052 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4466 27 -     16391 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               4025 27 -     17186 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27633 23 -     32367 A--TGATTCATAA-GGAGC--TGTTT-CG------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9299 23 -     15198 A--TGATTCATAA-GGAGCC----AG-CTTC----
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 I 4
s Ateles_geoffroyi_b.tarseq_1536                               277123 27 +  21539123 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13288 27 +     48076 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8424 27 -     28759 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              35980 27 +     44353 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51350 27 -     71267 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25408 27 -     33135 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7967030 23 -  23207421 A--TGATTCATAA-GGAGCC----AA-ATTC----
i Balaenoptera_acutorostrata.KI537508.1                  C 0 I 4
s Balaenoptera_bonaerensis.DF411050.1                         3531 23 -     25979 A--TGATTCATAA-GGAGCC----AA-ATTC----
i Balaenoptera_bonaerensis.DF411050.1                    C 0 I 4
s Beatragus_hunteri.BeaHun_scaffold_7278                     93366 23 +    124022 A--TGATTCATAA-GGAGCC----AA-ATTC----
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 I 4
s Bison_bison.KN261452.1                                     36555 23 +    288883 A--TGATTCATAA-GGAGCC----AA-ATAC----
i Bison_bison.KN261452.1                                 C 0 I 4
s Bos_indicus.CM003047.1                                  28423708 23 -  48749331 A--TGATTCATAA-GGAGCC----AA-ATAC----
i Bos_indicus.CM003047.1                                 C 0 I 4
s Bos_mutus.JH880303.1                                      769309 23 +   1948126 A--TGATTCATAA-GGAGCC----AA-ATAC----
i Bos_mutus.JH880303.1                                   C 0 I 4
s Bos_taurus.CM000203.6                                   27559854 23 -  45695690 A--TGATTCATAA-GGAGCC----AA-ATAC----
i Bos_taurus.CM000203.6                                  C 0 I 4
s Bubalus_bubalis.KI419123.1                               1536535 23 -   4408762 A--TGATTCATAA-GGAGCC----AA-ATTC----
i Bubalus_bubalis.KI419123.1                             C 0 I 4
s Cacajao_ayresi.k141_96119                                  10202 27 +     28062 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45493 27 -     91139 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  23020 27 +     95584 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22933 27 +    119600 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12556 27 +     18648 A--TTATTAATTA-GGAGCCA----G-GCTCTTCT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             12059 27 -     13885 A--TTATTAATTA-GGAGCCA----G-GCTCTTCT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            4270 27 -      8861 A--TTATTAGTTA-GGAGCCA----G-GCTCTTCT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456612 27 + 189096842 A--TTATTAATTA-GGAGCCA----G-GGTCTTCT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               4186 27 +      8664 A--TTATTAATTA-GGAGCCA----G-GCTCTTCT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7635074 23 +  17673402 C--CAATTCATAA-GGACCC----AA-AATT----
i Camelus_bactrianus.KN276810.1                          C 0 I 4
s Camelus_dromedarius.KN272107.1                           4669375 23 +   7040546 C--CAATTCATAA-GGACCC----AA-AATT----
i Camelus_dromedarius.KN272107.1                         C 0 I 4
s Camelus_ferus.KB017975.1                                 1213073 23 +   1652518 C--CAATTCATAA-GGACCC----AA-AATT----
i Camelus_ferus.KB017975.1                               C 0 I 4
s CanFam4.chr16                                           42509111 23 +  60362399 A--TGATTCACGA-GGATTA----AC-ATTC----
i CanFam4.chr16                                          C 0 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12746 23 -     23171 A--TGATTCACGA-GGATTA----AC-ATTC----
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 4
s Canis_lupus_dingo.QKWQ01000480.1                          226087 23 +   9314153 A--TGATTCACGA-GGATTA----AC-ATTC----
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 4
s Canis_lupus_familiaris.chr16                            41619224 23 +  59632846 A--TGATTCACGA-GGATTA----AC-ATTC----
i Canis_lupus_familiaris.chr16                           C 0 I 4
s Canis_lupus_orion.HG994398.1                            45110805 23 -  63665305 A--TGATTCACGA-GGATTA----AC-ATTC----
i Canis_lupus_orion.HG994398.1                           C 0 I 4
s Capra_aegagrus.CM003241.1                               27416383 23 -  46296322 A--TGATTCATAA-GGAACC----AA-ATTC----
i Capra_aegagrus.CM003241.1                              C 0 I 4
s Capra_hircus.CM004588.1                                 26598380 23 +  44709034 A--TGATTCATAA-GGAACC----AA-ATTC----
i Capra_hircus.CM004588.1                                C 0 I 4
s Capromys_pilorides.CapPil_scaffold_26391                    2291 21 -     20114 A--TGATTCGGAA-GGATCC----AT-AA------
i Capromys_pilorides.CapPil_scaffold_26391               C 0 I 3
s Carlito_syrichta.NW_007259797.1                           274566 27 +    496798 A--TGATTCATAA-AGAGCCA----T-TTTCTTGT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               4172 23 +      9923 A--TGATTCATAA-GGAGCC----AG-CTTC----
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 I 4
s Castor_canadensis.CasCan_scaffold_39952                    31663 21 -     39886 A--TTATTCATAA-GAAGCC----AA-AT------
i Castor_canadensis.CasCan_scaffold_39952                C 0 I 7
s Catagonus_wagneri.CatWag_scaffold_2839                     83383 23 -    217609 A--TGATTCATAA-GGAGAT----AA-ATTC----
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 4
s Cavia_aperea.AVPZ01000300.1                              5000258 21 +  23392119 A--AGATTCAGAA-GGAGGN----NN-NN------
i Cavia_aperea.AVPZ01000300.1                            C 0 I 19
s Cavia_porcellus.DS562891.1                               5003699 21 +  23407841 A--AGATTCAGAA-GGAGGC----AT-AA------
i Cavia_porcellus.DS562891.1                             C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_8919                          584 21 -    143979 A--AGATTCAGAA-GGAGGC----AT-AA------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 3
s Cebuella_niveiventris.k141_592277                           7527 27 -     12580 A--TTATTAATGA-GGAGCCA----G-GCTCTTCT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45636 27 +     53515 A--TTATTAATGA-GGAGCCA----G-GCTCTTCT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376262 27 -  26074798 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10331 27 -     34880 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69429 27 -     89041 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2229 27 -     76265 A--TGACTCATAA-AGAGCCG----T-TTTCTTGT
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495705 23 -  27778364 A--TGATTCATAA-GGATCC----AG-ATTC----
i Ceratotherium_simum.JH767749.1                         C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22538 23 +     27315 A--TGATTCATAA-GGATCC----AG-ATTC----
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 4
s Cercocebus_atys.KQ010504.1                                144208 27 -   4669795 A--TTATTCTTTA-GGAACCA----C-ACTCTTCG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                          182 27 +      3297 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3380 27 -     14410 A--TTATTCTTTA-GGAACCA----C-ACTCTTCG
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47762 27 -    148725 A--TTATTCTTTA-GGAACCA----C-ACTCTTCG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        30039 27 -     40656 A--TTATTCTTTA-GGAACCA----G-ACTGTTCG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                           9998 27 +     20796 A--TTATTCTTTA-GGAACCA----G-ACTGTTCG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            15112 27 -     17524 A--TTCTTCTTTA-GGAACCA----G-ACTGTTCG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30845 27 -     34525 A--TTATTCTTTA-GGAACCA----G-ACTGTTCG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14623 27 -     25376 A--TTATTCTTTA-GGAACCA----G-ACTGTTCG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367212 27 -  39242232 A--TTATTCTTTA-GGAACCA----G-ACTGTTCG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272937 27 +  21565898 A--TTATTCTTTA-GGAACCA----G-ACTGTTCG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35304 27 -     45857 A--TTATTCTTTA-GGAACCA----G-ACTGTTCG
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30205 27 -     32606 A--TTATTCTTTA-GGAACCA----G-ACTGTTTG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6360 27 +      8499 A--TTATTCTTTA-GGAACCA----G-ACTGTTCG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28765 27 +     70610 A--TTATTCTTTA-GGAACCA----G-ACTGTTCG
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25727 27 +     36323 A--TTATTCTTTA-GGAACCA----G-ACCGTTCG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15629  7 -     19938 A--TGATTC--------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 4
s Cheracebus_lucifer.k141_2312002                            11296 27 -     32913 A--TTATTCATTA-GGAGCCA----G-CCTCTTCT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21709 27 -     40346 A--TTATTCATTA-GGAGCCA----G-CCTCTTCT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21963 27 +    216457 A--TTATTCATTA-GGAGCCA----G-CCTCTTCT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21753 27 +     39636 A--TTATTCATTA-GGAGCCA----G-CCTCTTCT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33845 27 -     52013 A--TTATTCATTA-GGAGCCA----G-GCTTTTCT
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44833 27 -    112038 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10383 27 +     34062 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346627 27 +  18827391 A--TTATTCTTTA-GGAACCA----G-ACTCTCTG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13166 27 -     44032 A--TTATTCTTTA-GGAACCA----G-ACTCTCTG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            308013 27 - 135778131 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2305  7 +     10270 A--TGATTC--------------------------
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 I 20
s Choloepus_hoffmanni.KN194906.1                            609782  7 -    839153 A--TGATTC--------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 20
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2551 23 -      4087 A--TGACTCTTAA-GGAACC----AG-ATTC----
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 I 2
s Colobus_angolensis.KN981557.1                             412421 27 -   2368649 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382303 27 - 200372422 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5856 27 -     84244 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810884 23 +  53390261 A--CGATTCATA-TGGAGTG----AA-ACTC----
i Condylura_cristata.JH655891.1                          C 0 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6453 23 -      8242 A--TGATTCACTA-GGATCC----AG-ATTC----
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 4
s Cricetomys_gambianus.CriGam_scaffold_14425                 47601 21 -     83289 A--TGATTCATAA-GGCACC----AT-GT------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 3
s Cricetulus_griseus.LT883664.1                          213119119 20 - 224834208 A--TGTACCATA--TGCTCC----AA-GT------
i Cricetulus_griseus.LT883664.1                          C 0 I 3
s Crocidura_indochinensis.CroInd_scaffold_205242                39 23 +      5812 A--TAATTCATAA-GAATGC----AG-ACTC----
i Crocidura_indochinensis.CroInd_scaffold_205242         C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_16129              8055 23 +     87169 A--TGGTTCACAA-GGATCT----AA-ATTC----
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 4
s Ctenodactylus_gundi.CteGun_scaffold_65                    650338 21 -   1526836 A--TGATTCACAA-GAAGCC--G--T-AT------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22963 21 +     50838 A--TGATTCAGAA-GGATCC----AT-GA------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 3
s Cuniculus_paca.CunPac_flattened_line_7025                  12451 21 +     36344 A--TGATTCAGAA-GGAGGC----AT-AA------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 3
s Dasyprocta_punctata.DasPun_flattened_line_15900            31892 21 +     75252 A--TGATTCATAA-AGAGGC----AT-AA------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 3
s Dasypus_novemcinctus.JH564415.1                          2113372  7 -   2246927 A--TGATTC--------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 4
s Delphinapterus_leucas.KZ290073.1                        18635442 23 -  35494412 A--TGGTTCATAA-GGAGCC----AA-ATTC----
i Delphinapterus_leucas.KZ290073.1                       C 0 I 4
s Desmodus_rotundus.KZ672289.1                            11869165 23 -  20541912 A--TGATTCATAA-GGAGCC----AG-CTTC----
i Desmodus_rotundus.KZ672289.1                           C 0 I 4
s Dicerorhinus_sumatrensis.PEKH010002091.1                  667976 23 -   1390856 A--TGATTCATAA-GGATCC----AG-ATTC----
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 4
s Diceros_bicornis.DicBicMic_scaffold_5955                  142781 23 -    198055 A--TGATTCATAA-GGATCC----AG-ATTC----
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 4
s Dipodomys_ordii.KN672350.1                              18955459 21 -  37912305 C--TTATTCATAA-GAAGTC-T---T-AT------
i Dipodomys_ordii.KN672350.1                             C 0 I 251
s Dipodomys_stephensi.DipSte_scaffold_77284                   1063 21 +     14058 C--TTATTCATAA-GAAGTC----AT-AT------
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 I 251
s Dolichotis_patagonum.DolPat_scaffold_341948                   57 21 -      1676 A--AGATTCAGAA-GTAGGC----AT-AA------
i Dolichotis_patagonum.DolPat_scaffold_341948            C 0 I 3
s Echinops_telfairi.JH980293.1                            62858662 23 - 111700974 A--GGATTCATAA-GGAACC----AG-ATTC----
i Echinops_telfairi.JH980293.1                           C 0 I 4
s Eidolon_helvum.AWHC01266696.1                               9850 23 +     19438 A--TGATCCATAA-GGAgcc----aa-attt----
i Eidolon_helvum.AWHC01266696.1                          C 0 I 4
s Elaphurus_davidianus.JRFZ01104969.1                       246169 23 -    607251 A--TGATTCATAA-GGAGCC----AA-ATTC----
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 4
s Elephantulus_edwardii.JH947257.1                         9114013 23 -  10337057 A--TGATTCATAA-GGAACC----AT-ACTC----
i Elephantulus_edwardii.JH947257.1                       C 0 I 4
s Ellobius_lutescens.LOEQ01008920.1                          35324 20 +    110024 G--TGAGTCATA--GGAGCC----AA-CT------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 3
s Ellobius_talpinus.LOJH01026522.1                           17245 20 +     18970 G--TGAGTCATA--GGAGCC----AA-CT------
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 3
s Enhydra_lutris.KZ291758.1                               24925705 23 +  41312741 A--TGATTCACAA-GGATCC----AA-GTTC----
i Enhydra_lutris.KZ291758.1                              C 0 I 4
s Eptesicus_fuscus.JH977646.1                             12582936 23 +  14770903 A--TGATTCACAA-GGAGCC----AT-AGTC----
i Eptesicus_fuscus.JH977646.1                            C 0 I 4
s Equus_asinus.JREZ01000139.1                              3045443 23 -   4378816 A--CGATTCCTAA-GGAGCC----AG-ATCC----
i Equus_asinus.JREZ01000139.1                            C 0 I 4
s Equus_caballus.CM000403.2                               21379373 23 +  39960074 A--TGATTCCTAA-GGAGCC----AG-ATCC----
i Equus_caballus.CM000403.2                              C 0 I 4
s Equus_przewalskii.KK951119.1                              415355 23 -    498745 A--TGATTCCTAA-GGAGCC----AG-ATCC----
i Equus_przewalskii.KK951119.1                           C 0 I 4
s Erinaceus_europaeus.JH835339.1                           3671643 23 +   7059049 A--TGATTCACA-TGAAGTC----AG-TTTC----
i Erinaceus_europaeus.JH835339.1                         C 0 I 2
s Erythrocebus_patas.Contig38                               266155 27 +  21539334 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74645 23 -    133382 A--TGGTTCATAA-GGAGCC----AA-ATTC----
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 I 4
s Eubalaena_japonica.EubJap_flattened_line_57114              2367 23 +     25849 A--TGGTTCATAA-GGAGCC----AA-ATTC----
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 I 4
s Felis_catus.CM001381.2                                 186250794 23 - 206538554 A--TGGTTCACAA-GGATCC----AA-ATTC----
i Felis_catus.CM001381.2                                 C 0 I 4
s Felis_catus_fca126.CM031415.1                          185120750 23 - 205367284 A--TGGTTCACAA-GGATCC----AA-ATTC----
i Felis_catus_fca126.CM031415.1                          C 0 I 4
s Felis_nigripes.FelNig_flattened_line_44075                  1392 23 +     25330 A--TGGTTCACAA-GGATCC----AA-ATTC----
i Felis_nigripes.FelNig_flattened_line_44075             C 0 I 4
s Fukomys_damarensis.KN121974.1                            2926254 21 -   3816255 A--TGATTCAGA-TGGAGGC----AT-AA------
i Fukomys_damarensis.KN121974.1                          C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_51812                5238 23 -     28519 A--TGATTCATAA-AGAGCC----AG-ATTC----
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 I 4
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2427 23 +    660261 A--TGATTCATAA-GGAGCC----AA-ATTC----
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 I 4
s Glis_glis.GliGli_scaffold_163929                            5253 24 -      6791 A--TGATTCATCA-AGAGCC-AGTTT-CT------
i Glis_glis.GliGli_scaffold_163929                       C 0 I 8
s Gorilla_beringei.k141_3218903                                929 25 -      2763 A--TTATTCAT---GGAGCCC----G-ACTCTTCT
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                259349 25 - 186649187 A--TTATTCAT---GGAGCCC----G-ACTCTTCT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    7171 24 -     78134 A--TGATTCATAA-AGAGAC-AGTTT-TT------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 16
s Helogale_parvula.HelPar_flattened_line_2585                34427 23 -    327341 A--TGGTTCACA-GGGATCC----AA-ATTC----
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 4
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 16094 23 +     48891 A--TGATTCATAA-GGAGCC----AG-ATTC----
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 I 4
s Heterocephalus_glaber.JH602082.1                         1938691 21 -  22651954 A--TGATTCAGA-TGGAGGC----AT-AA------
i Heterocephalus_glaber.JH602082.1                       C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6412 23 +      8654 G--TGATTCCTAA-GCAGCC----AG-ATTC----
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11480 23 -     36432 A--TGATTTATAA-GGAGCC----AA-GTTC----
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 I 4
s Hipposideros_galeritus.HipGal_scaffold_108494                246 23 -      8370 A--TGATTCATAA-AGGTTC----AG-ACTC----
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 I 4
s Hoolock_leuconedys.ctg274                                    145812 27 -    630532 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  74090 23 +     83186 A--TGGTTCATAA-GGATCC----AA-ATTC----
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 4
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75628 21 +    143317 A--AGATTCAGAA-GGAGGC----AT-AA------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 3
s Hylobates_agilis.k141_1155965                               8859 27 +     12352 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              16046 27 +     55766 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055574 27 + 191637585 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804452 27 +  11177569 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11494 21 -    135385 A--TGATTCAGAA-GGAACC----AT-AA------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 3
s Ictidomys_tridecemlineatus.JH393364.1                     390743 24 +   7955117 A--TGATTCATAA-GGAGCC-CATTT-CT------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 3
s Inia_geoffrensis.IniGeo_flattened_line_69447               13546 23 -     16823 A--TGGTTCATAA-GGAGCC----AA-ATTC----
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 I 4
s Jaculus_jaculus.JH725527.1                               1243227 21 +   9596543 A--TGATTTATAA-GTAGAC----AG-AT------
i Jaculus_jaculus.JH725527.1                             C 0 I 6
s Kogia_breviceps.KogBre_flattened_line_3970                 75384 23 -     97402 A--TGGTTCATAA-GGAGCC----AA-ATTC----
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 I 4
s Lagothrix_lagothricha.k141_246028                          45670 27 +    110728 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1623 23 -     25587 G--TAATTCACAA-GGAGCC----AG-AGTC----
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 I 4
s Leontocebus_fuscicollis.k141_3470480                        1115 27 -     23187 A--TTATTCATTA-GGAGCCA----G-GTTTTTCT
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1429 27 -     14280 A--TTATTCATTA-GGAGCCA----G-GTTTTTCT
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                        1069 27 +      3713 A--TTATTCATTA-GGAGCCA----G-GTTTTTCT
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1255 27 +      8855 A--TTATTAATTA-GGAACCA----G-GCTCTTGT
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         6056 27 -     13645 A--TTATTAATTA-GGAACCA----G-GCTCTTAT
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        816975 23 -   3914936 A--TGATTCACAA-GAATCC----AA-GTTC----
i Leptonychotes_weddellii.KB714746.1                     C 0 I 4
s Lepus_americanus.LepAme_scaffold_56121                     23241 23 +     24238 A--TGATTCATAA-CGAGCT----AA-ATTC----
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 16
s Lipotes_vexillifer.KE559953.1                             344728 23 +    662738 A--TGGTTCATAA-GGAGCC----AA-ATTC----
i Lipotes_vexillifer.KE559953.1                          C 0 I 4
s Lophocebus_aterrimus.ctg367                               337085 27 -   1826925 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39088150 23 +  43346337 A--TGATTCATTA-GGAGCG----AG-ATTC----
i Loxodonta_africana.GL010049.1                          C 0 I 4
s Lycaon_pictus.CM007581.1                                41618379 23 +  59628241 A--TGATTCATGA-GGATTA----AC-ATTC----
i Lycaon_pictus.CM007581.1                               C 0 I 4
s Macaca_arctoides.k141_1757516                              48482 27 -     61512 A--TTATTCTTTA-GGAACCA----G-ACTCTTTG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 376144 27 -  60120075 A--TTATTCTTTA-GGAACCA----G-ACTCTTTG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28412 27 +     30207 A--TTATTCTTTA-GGAACCA----G-ACTCTTTG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3250 27 -      5035 A--TTATTCTTTA-GGAACCA----G-ACTCTTTG
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28365 27 +     30527 A--TTATTCTTTA-GGAACCA----G-ACTCTTTG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39541 27 -     50087 A--TTATTCTTTA-GGAACCA----G-ACTCTTTG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49286 27 +     51645 A--TTATTCTTTA-GGAACCA----G-ACTCTTTG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418488 27 - 187317192 A--TTATTCTTTA-GGAACCA----G-ACTCTTTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402719 27 +  25927173 A--TTATTCTTTA-GGAACCA----G-ACTCTTTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51890 27 -     62418 A--TTATTCTTTA-GGAACCA----G-ACTCTTTG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4421 27 +     14901 A--TTATTCTTTA-GGAACCA----G-ACTCTTTG
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48363 27 +     59329 A--TTATTCTTTA-GGAACCA----G-ACTCTTTG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274270 27 +    668171 A--TTATTCTTTA-GGAACCA----G-ACTCTTTG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2902 27 -      5049 A--TTATTCTTTA-GGAACCA----G-ACTCTTTG
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 6069 27 +     17132 A--TTATTCTTTA-GGAACCA----G-ACTCTTTG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226823 23 -    270270 A--TGATTCATAA-GGAGCC----AG-ATTC----
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 I 4
s Mandrillus_leucophaeus.scaffold280                        325552 27 +  24302211 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360383 27 -    752769 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             677003 23 -    737560 A--TAATTCATAA-GGAGCC----AA-ATTA----
i Manis_javanica.JSZB01003497.1                          C 0 I 9
s Manis_pentadactyla.KN006162.1                             224299 23 +    317179 A--TAATTCATAA-GGAGCC----AA-ATTC----
i Manis_pentadactyla.KN006162.1                          C 0 I 9
s Marmota_marmota.CZRN01000018.1                           7504943 24 +  40650429 A--TGATTCATAA-GGAGCC-CATTT-CT------
i Marmota_marmota.CZRN01000018.1                         C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                       154149 23 +    207569 A--CAATTCATAA-GGATCC----AG-ATTC----
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 I 4
s Mellivora_capensis.MelCap_flattened_line_19308             29717 23 -     74585 A--TGATTCATAA-GGATCC----AA-GTTC----
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 4
s Meriones_unguiculatus.MerUng_scaffold_7390                 53303 21 -    140813 A--TGAGTCATAA-GGAGCC----AA-GT------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 3
s Mesoplodon_bidens.MesBid_scaffold_6114                     91012 22 +     93471 A--TGGTTCATA--GGAGCC----AA-CTTC----
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 I 4
s Mico_argentatus.k141_582562                                12665 27 +     17804 A--TTATTAATTA-GGAGCCA----G-GCTCTTCT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                392 27 +      5551 A--TTATTAATTA-GGAGCCA----G-GCTCTTCT
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21476 27 -     26561 A--TTATTAATTA-GGAGCCA----G-GCTTTTCT
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49843 23 +    145209 A--TGATTCATAA-GGAACT-T---G-ATTC----
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 4
s Micronycteris_hirsuta.MicHir_scaffold_2233                188744 23 +    200668 A--TGATTCATAA-GGAGCC----AC-CTTC----
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 I 4
s Microtus_ochrogaster.CM001695.1                         15966731 20 +  27267610 C--TGAGTCATA--GGAGCC----AA-CT------
i Microtus_ochrogaster.CM001695.1                        C 0 I 3
s Miniopterus_natalensis.LDJU01000034.1                    6368564 23 -   8254450 A--TTGTTCACAA-GGAGCC----AG-ATTC----
i Miniopterus_natalensis.LDJU01000034.1                  C 0 I 4
s Miniopterus_schreibersii.MinSch_scaffold_23309             46295 23 -     48117 A--TTGTTCACAA-GGAGCC----AG-ATTC----
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 I 4
s Miopithecus_ogouensis.k141_1534655                         25651 27 -     27822 A--TTATTCTTTA-GGAACCA----G-ACTCTTCA
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12208 23 +     27589 G--TGATTCACAA-GAATCC----AA-GTTC----
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 4
s Monodon_monoceros.MonMon_M_scaffold_103                   363120 23 +    437263 A--TGGTTCATAA-GGAGCC----AA-ATTC----
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 I 4
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183189 23 +    366855 A--TGATTCACAA-GAAGCC----AG-ATTC----
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 4
s Moschus_moschiferus.MosMos_scaffold_13123                  32325 23 -     82753 A--TGATTCATAA-GGAGCC----AA-ATTC----
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 I 4
s Mungos_mungo.MunMun_flattened_line_18455                   22177 23 -     63510 A--TGGTTCACA-GGGATCC----AA-ATTC----
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 4
s Murina_feae.MurFea_scaffold_17764                          45552 23 +     47283 A--TGATTCACAA-AGAGCC----AT-AGTA----
i Murina_feae.MurFea_scaffold_17764                      C 0 I 4
s Mus_caroli.LT608237.1                                   35597923 21 + 120012414 A--CGAGTCAGAA-GGAGTC----AA-GT------
i Mus_caroli.LT608237.1                                  C 0 I 3
s Mus_musculus.chr8                                       41691465 21 + 129401213 A--TGAGTCAGAA-GGAGTC----AA-GT------
i Mus_musculus.chr8                                      C 0 I 3
s Mus_pahari.LT608297.1                                   58219424 21 +  89631738 A--TGAGCCAGAA-GGAGTT----AA-GT------
i Mus_pahari.LT608297.1                                  C 0 I 3
s Mus_spretus.CM004101.1                                  39500384 21 + 130317789 A--TGAGTCAGAA-GGAGTC----AA-GT------
i Mus_spretus.CM004101.1                                 C 0 I 3
s Muscardinus_avellanarius.MusAve_scaffold_5560               3267 24 -    124358 A--TGATTCATAA-AGAACC-AGTTT-CT------
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 I 8
s Mustela_putorius.JH418006.1                             14358667 23 +  14710649 A--TGATTCACAA-GGATCC----AA-GTTG----
i Mustela_putorius.JH418006.1                            C 0 I 4
s Myocastor_coypus.MyoCoy_scaffold_57531                      1349 21 -     27262 A--TGGTTCTGAA-GGATCC----AT-AA------
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 I 3
s Myotis_brandtii.KE162005.1                               9797557 23 +  10118263 A--TGATTCACAA-GGAGCC----AT-AGTC----
i Myotis_brandtii.KE162005.1                             C 0 I 4
s Myotis_davidii.KB100139.1                                4391731 23 +   6019432 A--TGATTCACAA-GGAGCC----AT-AGTC----
i Myotis_davidii.KB100139.1                              C 0 I 4
s Myotis_lucifugus.GL429869.1                               387770 23 +   4330536 A--TGATTCACAA-GGAGCC----AT-AGTC----
i Myotis_lucifugus.GL429869.1                            C 0 I 4
s Myotis_myotis.MyoMyo_scaffold_66571                         6557 23 +     18357 A--TGATTCACAA-GGAGCC----AT-AGTC----
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 I 4
s Nannospalax_galili.KL204047.1                             950321 24 +   3037898 A--TAAGGCATAA-GGTGCC-AAATT-AT------
i Nannospalax_galili.KL204047.1                          C 0 I 3
s Nasalis_larvatus.k141_1350636                              32436 27 +     34575 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469655 23 -  31847680 A--TGATTCACAA-GAATCC----AA-GTTC----
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 4
s Neophocaena_asiaeorientalis.KZ687982.1                   1235778 23 -   7148211 A--TGGTTCATAA-GGAGCC----AA-ATTC----
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 I 4
s Noctilio_leporinus.NocLep_scaffold_7894                   131469 23 -    149072 A--TGATTCATAA-GGAGAC----AG-ATTA----
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 I 4
s Nomascus_annamensis.k141_1771965                           56747 27 -    132029 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12842 27 -     16345 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18731 27 +     22201 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416961 27 -  22158432 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29136 27 -     54323 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                202084 23 +   9404916 G--TGATTCATGA-GGATTA----AC-ATTC----
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 4
s Octodon_degus.JH651603.1                                11059623 21 -  11899542 A--TGATTCAGAA-GGATCC----AT-AA------
i Octodon_degus.JH651603.1                               C 0 I 3
s Odobenus_rosmarus.KB229312.1                             1455424 23 +   2017862 A--TGATTCACAA-GGATCC----AA-GTTC----
i Odobenus_rosmarus.KB229312.1                           C 0 I 4
s Odocoileus_virginianus.KZ100018.1                         442721 23 -    630418 A--TGATTCATAA-GGAGCC----AA-ATTC----
i Odocoileus_virginianus.KZ100018.1                      C 0 I 4
s Okapia_johnstoni.LVCL01S0005463.1                          22378 23 +    150152 A--TGATTCATAA-GGAGCC----AA-ATTC----
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 I 4
s Ondatra_zibethicus.OndZib_scaffold_7387                    97348 20 -    140218 G--TGAGTCATA--GGAGCC----AA-CT------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_28377                    7891 20 -     41509 A--TGAGTCATA--GTAGCC----AA-GT------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 3
s Orcinus_orca.KB316932.1                                  8106191 23 +  10937097 A--TGGTTCATAA-GGAGCC----AA-ATTC----
i Orcinus_orca.KB316932.1                                C 0 I 4
s Orycteropus_afer.OryAfe_flattened_line_201229               3181 23 +     11607 A--AGATTCATAA-GGAGCC----AG-ATTC----
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 I 4
s Oryctolagus_cuniculus.CM000791.1                       107109530 23 - 174332312 A--TGATTCATAA-GGAGCT----AA-ATTC----
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 16
s Otocyon_megalotis.JAEUCK010005147.1                        43246 23 +    559221 A--TGATTCAT-Gaggatta----ac-attt----
i Otocyon_megalotis.JAEUCK010005147.1                    I 212 I 4
s Ovis_aries.CM001607.2                                   26411120 23 -  44047080 A--TGATTCATAA-GGAGCC----AA-ATTC----
i Ovis_aries.CM001607.2                                  C 0 I 4
s Ovis_canadensis.OviCan_scaffold_67953                      11743 23 +     17875 A--TGATTCATAA-GGAGCC----AA-ATTC----
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 I 4
s Pan_paniscus.AJFE02001037.1                                  708 25 +      1186 A--TTATTCAT---GGAGCCA----G-CCTCTTAT
i Pan_paniscus.AJFE02001037.1                            C 0 I 18
s Pan_troglodytes.NBAG03003091.1                             17137 27 -     26668 aaattattcat---gGAGCCA----G-ACTCTTCT
i Pan_troglodytes.NBAG03003091.1                         I 139 I 31
s Panthera_onca.PanOnc_flattened_line_3271                   28724 23 -    230217 A--TGGTTCACAA-GAATCC----AA-ATTC----
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 4
s Panthera_pardus.KV860321.1                              18465965 23 -  18783137 A--TGGTTCACAA-GGATCC----AA-ATTC----
i Panthera_pardus.KV860321.1                             C 0 I 4
s Panthera_tigris.KE722367.1                               3976564 23 +   8748460 A--TGGTTCACAA-GGATCC----AA-ATTC----
i Panthera_tigris.KE722367.1                             C 0 I 4
s Pantholops_hodgsonii.KE114653.1                          1622638 23 +   2937107 A--TGATTCATAA-GGAGCC----AA-ATTC----
i Pantholops_hodgsonii.KE114653.1                        C 0 I 4
s Papio_anubis.CM001495.2                                   246567 27 - 183742232 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12852 27 +     21308 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295595 27 -  20919399 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25494 27 -     27687 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2171 27 +     10553 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  2132 27 -     10386 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18845 23 +     78924 A--TGGTTCACAA-GGATCC----AA-ATTT----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 4
s Perognathus_longimembris.PerPac_flattened_line_89005        7671 21 +      9367 C--TTATTCATAA-GAAGTC----AT-GT------
i Perognathus_longimembris.PerPac_flattened_line_89005   I 2 I 168
s Peromyscus_maniculatus.KI615324.1                         251091  1 +  18517816 ----------------------------T------
i Peromyscus_maniculatus.KI615324.1                      I 3 I 3
s Petromus_typicus.PetTyp_scaffold_17301                     35688 21 -     56120 C--AGATTCAGAA-GGAGGT----AC-AA------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159               7712 23 -     63832 A--TGGTTCATAA-GGAGCC----AA-ATTC----
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 I 4
s Piliocolobus_badius.k141_2704958                            5817 27 +     55023 A--TTATTCCTTA-GGAGCCA----G-ACTCTTCG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5340 27 -     89929 A--TTATTCCTTA-GGAGCCA----G-ACTCTTCG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5928 27 +     40849 A--TTATTCCTTA-GGAGCCA----G-ACTCTTCG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257657 27 +  14605196 A--TTATTCCTTA-GGAGCCA----G-ACTCTTCG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             8047 23 +     22231 A--TGGTTCACAA-GGAGCC----AT-AGTC----
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 I 4
s Pithecia_albicans.k141_1239476                             67182 27 +    207309 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8277 27 -     25401 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               34023 27 +     58159 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34299 27 +     63561 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           34054 27 +     51148 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              559030 27 -   4542175 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           34038 27 +     51125 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4960 23 +     19503 A--TGGTTCATAA-GGAGCC----AA-ATTC----
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 I 4
s Plecturocebus_bernhardi.k141_2549090                       10470 27 +     39866 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5552 27 -      9282 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44956 27 -     87950 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45350 27 -     88961 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10048 27 -     39403 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          45000 27 +     87928 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         10047 27 -     60166 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16968 27 -     67232 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44900 27 -     90634 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46367 27 +     89403 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182509 25 - 189387572 A--TTATTCAT---GGAGCCA----G-ACTCTTCT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197251 25 -   9816681 A--TTATTCAT---GGAGCCA----G-ACTCTTCT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              31015 27 +     69807 A--TTATTCATTA-GGAGCCA----G-ATTCTTCG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48198 27 -     80239 A--TTATTCATTA-GGAGGCA----G-ATTCTTCG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2944 23 -     12774 G--TGATTCCTAA-GCAGCC----AG-ATTC----
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 I 2
s Psammomys_obesus.NESX01036366.1                            40836 21 +     52041 A--TGAGTCATAA-GGAGCC----AA-GT------
i Psammomys_obesus.NESX01036366.1                        C 0 I 3
s Pteronotus_parnellii.KE847780.1                            55827 24 -     66298 A--TGATTCATAA-GGAGCC----AGAATTC----
i Pteronotus_parnellii.KE847780.1                        C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8202 23 -     18639 A--TGATGCACAA-GGATCC----AA-GTTC----
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 4
s Pteropus_alecto.KB030862.1                               5844398 23 -  28871421 A--TGATCCATAA-GGAGCC----AG-ATTC----
i Pteropus_alecto.KB030862.1                             C 0 I 4
s Pteropus_vampyrus.KN525825.1                             3540914 23 -   4952924 A--TGACCCATAA-GGAACC----AG-ATTC----
i Pteropus_vampyrus.KN525825.1                           C 0 I 4
s Puma_concolor.QAVW01001104.1                            18102956 24 +  38429054 A--TGGTTCACAAAGGATCC----AA-ATTC----
i Puma_concolor.QAVW01001104.1                           C 0 I 4
s Pygathrix_cinerea.k141_1153803                             30384 27 +     91421 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156935 27 -   7812017 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11235 27 +     72585 A--TTATTCATTA-GGAGCCA----G-ACTCTTTG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5239 23 -     55207 A--TGATTCATAA-GGAGCC----AA-ATTC----
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 I 4
s Rattus_norvegicus.chr16                                 37026038 21 -  90668790 A--TGAGTCAAAA-GGAGCC----AC-GT------
i Rattus_norvegicus.chr16                                C 0 I 3
s Rhinolophus_sinicus.LVEH01000134.1                       2918297 23 +   3329780 A--TGATTCGTAA-GGATCC----AG-ATTC----
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 I 4
s Rhinopithecus_bieti.k119_778604                             4841 27 +      7119 A--TTATTCATTA-GGAGCCA----G-AGTCTTCG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125511 27 + 195417433 A--TTATTCATTA-GGAGCCA----G-AGTCTTCG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239683 27 -   7961872 A--TTATTCATTA-GGAGCCA----G-AGTCTTCG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79144 23 -    116970 A--TGATCCATAA-GGAGCC----AG-ATTC----
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 I 4
s Saguinus_bicolor.k141_161125                                9742 27 +     12412 A--TTATTCATTA-GGAGCCA----G-GCTTTTCT
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                              1064 27 +      9876 A--TTATTCATTA-GGAGCCA----G-GCTTTTCT
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16660 27 -     24931 A--TAATTCATTA-GGAGCCA----G-GCTTTTCT
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1539 27 +      4564 A--TAATTCATTA-GGAGCCA----G-GCTTTTCT
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4344 27 -      7443 A--TAATTCATTA-GGAGCCA----G-GCTTTTCT
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395377 27 - 209938924 A--TTATTCATTA-GGAGCCA----G-GCTTTTCT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1961 27 +     10149 A--TAATTCATTA-GGAGCCA----G-GCTTTTCT
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1305 27 +     10417 A--TTATTCATTA-GGAGCCA----G-GCTTTCCT
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14690 23 +     16473 A--TGATTCATAA-GGAGCC----AA-ATTC----
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 I 4
s Saimiri_boliviensis.NW_024100920.1                       1111429 27 + 121099817 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       32998 27 -     47369 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33381 27 -     79414 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              30072 27 -     34454 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17474 27 -     22428 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32628 27 -     47109 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240652 27 +   5703754 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10243 27 +     21866 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122735 23 +    313613 A--TGATTCATAA-GGAGTA----AG-ACAC----
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 4
s Semnopithecus_entellus.k141_583282                          1815 27 +     11297 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32208 27 +     58920 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18706 27 -     45317 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26364 27 -     42441 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1669243                      4005 27 -      6251 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Semnopithecus_schistaceus.k141_1669243                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          32128 27 -     48123 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52893 20 +     77746 A--AGAGTCAT--GAAAGCC----AA-GT------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_126            1867506 17 -   1910179 A--TGATTCAT-TGGGAGCC---------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 1
s Sorex_araneus.JH798187.1                                 4674715 23 +  18376816 A--TAATTCATAA-GGAGCC----AG-ACTC----
i Sorex_araneus.JH798187.1                               C 0 I 4
s Spermophilus_dauricus.KZ294078.1                         1872306 24 +   3870691 A--TGATTCATAA-GGAGCC-CATTT-CT------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525             16420 22 -     97271 A--TGATTCAAAA-GGATT-----AA-TTTC----
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 4
s Suricata_suricatta.SurSur_flattened_line_6629             129053 23 +    196729 A--TGGTTCACA-GGGATCC----AA-ATTC----
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 4
s Sus_scrofa.CM000828.4                                    6648331 23 +  69701581 A--TGATTCATAA-GAAGAC----AA-ATTC----
i Sus_scrofa.CM000828.4                                  C 0 I 4
s Symphalangus_syndactylus.tarseq_199                       394218 27 +   1523678 A--TTATTCATTA-GGAGCCA----G-ACTCTTCT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17764 23 +     22964 G--TGATTCACAA-GGAGCC----AG-ATTC----
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 I 4
s Tapirus_indicus.TapInd_scaffold_7432                      195164 23 +    199430 A--TGATTCATAA-GGAGCC----AG-ATTC----
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 I 4
s Tapirus_terrestris.TapTer_scaffold_755                    109144 23 -    539355 A--TGATTCATAA-GGAGCC----AG-ATTC----
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 I 4
s Tarsius_lariang.k141_1733899                                4757 27 +      9917 A--TGATTCATAA-AGAGCCA----T-TTTCTTGT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11553 27 +     20590 A--TGATTCATAA-AGAGCCA----T-TTTCTTGT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356378 27 - 186847797 A--TTATTCTTTA-GGAACCA----G-ACTCTTCG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              27994 21 -     33621 C--TAACTCAGAA-GAAGGC----AC-AA------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_31955                   22738  7 -     31044 A--TGATTC--------------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 4
s Tonatia_saurophila.TonSau_scaffold_294                    484074 23 -    610378 A--TGATTCATAA-GGAGCC----AG-CTTC----
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 4
s Trachypithecus_auratus.k141_1189070                        24117 27 +     26378 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36915 27 -     78344 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23442 27 +     25722 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31871 27 -     62838 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31862 27 +     46913 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12600 27 -     28527 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33802 27 -     64340 A--CTATTCATTA-GGAGCCA----G-ACTCTTCG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31840 27 -     63452 A--CTATTCATTA-GGAGCCA----G-ACTCTTCG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13291 27 +     22490 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1257 27 +      9911 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                         1052 27 -     33539 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258811 27 -   6242583 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4830 27 +     19340 A--TTATTCATTA-GGAGCCA----G-ACTCTTCG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177948 14 -    200418 A--TGATTCATAA-GGA------------------
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485748 23 -  10818551 A--TGATTCATGA-GGAGCC----AG-ATTC----
i Trichechus_manatus.JH594705.1                          C 0 I 4
s Tupaia_chinensis.KB320699.1                              1839998 21 -   4065304 a--ttattcatAA-GGAATC-----G-ATT-----
i Tupaia_chinensis.KB320699.1                            C 0 I 1
s Tupaia_tana.TupTan_flattened_line_394                      14069 23 -     70247 A--TTATTCATAA-GGAATC----AG-ATTC----
i Tupaia_tana.TupTan_flattened_line_394                  C 0 I 3
s Tursiops_truncatus.MRVK01000835.1                       17369315 23 -  33153633 A--TGGTTCATAA-GGAGCC----AA-ATTC----
i Tursiops_truncatus.MRVK01000835.1                      C 0 I 4
s Uropsilus_gracilis.UroGra_scaffold_46687                    7504 23 -     21056 A--TGATTAATAA-GGTGTT----AG-ATTC----
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 2
s Ursus_maritimus.KK499267.1                                185627 23 +   5085361 A--TGATTCATAA-GGATCC----AA-GTTC----
i Ursus_maritimus.KK499267.1                             C 0 I 4
s Vicugna_pacos.KN270157.1                                   80448 23 +   5488506 C--CAATTCATAA-GGAGCC----AA-AATT----
i Vicugna_pacos.KN270157.1                               C 0 I 4
s Vulpes_lagopus.VulLag_flattened_line_12041                108978 23 -    112863 A--TGATTCACAA-GGATTA----AC-ATTC----
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 4
s Xerus_inauris.XerIna_scaffold_2302                        178173 24 -    224448 A--TGATTCATAA-GGAACC-TGTTT-CT------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_17732         32630 23 -     86975 A--TGATTCACAA-GGATCC----AA-GTTC----
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 4
s Zapus_hudsonius.ZapHud_scaffold_11398                       4677 21 -     63895 A--TAATTTATAA-GGAGTC----AG-AT------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 6
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1277 22 +      3447 A--TGGTTCATA--GGAGCC----AA-CTTC----
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 I 4
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      10201 18 +     36723 AAGTT-A-CTCT-G---GGAA---A-A---T
s Acinonyx_jubatus.LLWD01001279.1                           816743 19 +   1699592 ATGTT-A-CTAT-G---GG--A-CAAA---T
i Acinonyx_jubatus.LLWD01001279.1                        I 4 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     28932 18 +     63021 AAGAT-T-CTCT-G---GG--A-CA-G---T
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419200 18 +  29979442 AAGTT-A-CTCT-G---GG--AA-A-A---C
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 4 C 0
s Ailurus_fulgens.LNAC01001112.1                            219199 18 +    347723 AAGTT-A-CTCT-G---GG--A-CA-A---T
i Ailurus_fulgens.LNAC01001112.1                         I 4 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    21706 18 -     61208 AAGAT-T-CCCT-A---GT--A-TA-C---T
i Allactaga_bullata.AllBul_scaffold_20030                I 6 I 3
s Allenopithecus_nigroviridis.k141_3755588                   51151 18 +     53615 AAGTT-A-CTCT-G---GGAA---A-A---T
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3179 18 +     13857 AAGTT-A-CTCT-G---GGAA---A-A---T
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19735 18 -     21945 AAGTT-A-CTCT-G---GGAA---A-A---T
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21420 18 +     32033 AAGTT-A-CTCT-G---AGAA---A-A---T
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74675 18 -     84148 AAGTT-A-CTCC-A---GGAA---A-A---T
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46929 18 -     78289 AAGTT-A-CTCC-A---GGAA---A-A---T
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46345 18 +     55831 AAGTT-A-CTCC-A---GGAA---A-A---T
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44807 18 -     64179 AAGTT-A-CTCC-A---GGAA---A-A---T
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1910 18 -      3959 AAGTT-A-CTCC-A---GGAA---A-A---T
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43432 18 +     45454 AAGTT-A-CTCC-A---GGAA---A-A---T
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              49081 18 +     70886 AAGTT-A-CTCC-A---GGAA---A-A---T
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11251 18 +     30854 AAGTT-A-CTCC-A---GGAA---A-A---T
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35387 18 +     42133 AAGTT-A-CTCC-A---GGAA---A-A---T
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592406 18 +   2318259 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Ammotragus_lervia.NIVO01071767.1                       I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180811 17 -    412891 AAAGC-A-CT-T-G---GG--A-CA-C---T
i Anoura_caudifer.AnoCau_scaffold_1412                   I 4 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53562 18 -     68529 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Antilocapra_americana.AntAmePen_scaffold_21030         I 4 C 0
s Aotus_azarae.k141_887050                                    3592 18 +     17741 AAGTT-A-CTCC-G---GGAA---A-A---T
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4217 18 -     15923 AAGTT-A-CTCC-G---GGAA---A-A---T
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674499 18 +   5030052 AAGTT-A-CTCC-G---GGAA---A-A---T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4493 18 -     16391 AAGTT-A-CTCC-G---GGAA---A-A---T
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               4052 18 -     17186 AAGTT-A-CTCC-G---GGAA---A-A---T
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27659 18 -     32367 AAGAT-T-CTT-TG---GT--A-CA-A---T
i Aplodontia_rufa.AprRuf_scaffold_46868                  I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9326 18 -     15198 AAGGC-A-CTCT-G---GG---GCG-C---T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             I 4 C 0
s Ateles_geoffroyi_b.tarseq_1536                               277150 18 +  21539123 AAGTT-A-CTCC-A---GGAA---A-A---T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13315 18 +     48076 TAGTT-A-CTCC-A---GGAA---A-A---T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8451 18 -     28759 AAGTT-A-CTCC-A---GGAA---A-A---T
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              36007 18 +     44353 AAGTT-A-CTCC-A---GGAA---A-A---T
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51377 18 -     71267 AAGTT-A-CTCC-A---GGAA---A-A---T
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25435 18 -     33135 TAGTT-A-CTCC-A---GGAA---A-A---T
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7967057 18 -  23207421 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Balaenoptera_acutorostrata.KI537508.1                  I 4 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3558 18 -     25979 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Balaenoptera_bonaerensis.DF411050.1                    I 4 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93393 18 +    124022 AAGTT-A-CTGT-G---GG--A-CA-A---T
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 4 C 0
s Bison_bison.KN261452.1                                     36582 18 +    288883 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Bison_bison.KN261452.1                                 I 4 C 0
s Bos_indicus.CM003047.1                                  28423735 18 -  48749331 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Bos_indicus.CM003047.1                                 I 4 C 0
s Bos_mutus.JH880303.1                                      769336 18 +   1948126 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Bos_mutus.JH880303.1                                   I 4 C 0
s Bos_taurus.CM000203.6                                   27559881 18 -  45695690 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Bos_taurus.CM000203.6                                  I 4 C 0
s Bubalus_bubalis.KI419123.1                               1536562 18 -   4408762 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Bubalus_bubalis.KI419123.1                             I 4 C 0
s Cacajao_ayresi.k141_96119                                  10229 18 +     28062 AAGTT-A-CTCT-G---GGAA---G-A---T
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45520 18 -     91139 AAGTT-A-CTCT-G---GGAA---G-A---T
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  23047 18 +     95584 AAGTT-A-CTCT-G---GGAA---G-A---T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22960 18 +    119600 AAGTT-A-CTCT-G---GGAA---G-A---T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12583 18 +     18648 AAGTC-A-CTCC-G---GGAA---A-A---T
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             12086 18 -     13885 AAGTT-A-CTCC-G---GGAA---A-A---C
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            4297 18 -      8861 AAGTC-A-CTCC-G---GGAA---A-A---T
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456639 18 + 189096842 AAGTC-A-CTCC-G---GGAA---A-A---T
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               4213 18 +      8664 AAGTC-A-CTCC-G---GGAA---A-A---T
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7635101 18 +  17673402 GAGTC-A-CTGT-G---GG--A-CA-A---T
i Camelus_bactrianus.KN276810.1                          I 4 C 0
s Camelus_dromedarius.KN272107.1                           4669402 18 +   7040546 GAGTC-A-CTGT-G---GG--A-CA-A---T
i Camelus_dromedarius.KN272107.1                         I 4 C 0
s Camelus_ferus.KB017975.1                                 1213100 18 +   1652518 GAGTC-A-CTGT-G---GG--A-CA-A---T
i Camelus_ferus.KB017975.1                               I 4 C 0
s CanFam4.chr16                                           42509138 18 +  60362399 AAGTT-A-TTCT-G---GG--A-CA-A---T
i CanFam4.chr16                                          I 4 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12773 18 -     23171 AAGTT-A-TTCT-G---GG--A-CA-A---T
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 4 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          226114 18 +   9314153 AAGTT-A-TTCT-G---GG--A-CA-A---T
i Canis_lupus_dingo.QKWQ01000480.1                       I 4 C 0
s Canis_lupus_familiaris.chr16                            41619251 18 +  59632846 AAGTT-A-TTCT-G---GG--A-CA-A---T
i Canis_lupus_familiaris.chr16                           I 4 C 0
s Canis_lupus_orion.HG994398.1                            45110832 18 -  63665305 AAGTT-A-TTCT-G---GG--A-CA-A---T
i Canis_lupus_orion.HG994398.1                           I 4 C 0
s Capra_aegagrus.CM003241.1                               27416410 18 -  46296322 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Capra_aegagrus.CM003241.1                              I 4 C 0
s Capra_hircus.CM004588.1                                 26598407 18 +  44709034 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Capra_hircus.CM004588.1                                I 4 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2315 16 -     20114 AAGGT-T-CTCT-GGAATA------------
i Capromys_pilorides.CapPil_scaffold_26391               I 3 I 2
s Carlito_syrichta.NW_007259797.1                           274593 18 +    496798 AAGTT-A-CTCT-G---GGAA---A-A---T
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               4199 18 +      9923 AAGGC-A-CTCT-G---GG--A-CA-C---T
i Carollia_perspicillata.CarPer_scaffold_107871          I 4 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31691 18 -     39886 AAGAT-T-CTCT-G---AG---TCA-A---T
i Castor_canadensis.CasCan_scaffold_39952                I 7 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83410 18 -    217609 AAGTC-A-CTGT-G---GG--A-CC-A---T
i Catagonus_wagneri.CatWag_scaffold_2839                 I 4 C 0
s Cavia_aperea.AVPZ01000300.1                              5000298  2 +  23392119 --------------------------N---N
i Cavia_aperea.AVPZ01000300.1                            I 19 C 0
s Cavia_porcellus.DS562891.1                               5003723 13 +  23407841 AAGGC-T-CTCT-G---AG------------
i Cavia_porcellus.DS562891.1                             I 3 I 5
s Cavia_tschudii.CavTsc_scaffold_8919                          608 13 -    143979 AAGGC-T-CTCT-G---AG------------
i Cavia_tschudii.CavTsc_scaffold_8919                    I 3 I 5
s Cebuella_niveiventris.k141_592277                           7554 18 -     12580 AAGTC-A-CTCC-A---GGAA---A-A---T
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45663 18 +     53515 AAGTC-A-CTCC-G---GGAA---A-A---T
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376289 18 -  26074798 AAGTT-A-CTCC-G---GGAA---A-A---T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10358 18 -     34880 AAGTT-A-CTCC-G---GGAA---A-A---T
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69456 18 -     89041 AAGTT-A-CTCC-G---GGAA---A-A---T
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2256 18 -     76265 AAGTT-A-CTCC-G---GGAA---A-A---T
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495732 18 -  27778364 AAATC-A-CTCT-G---GG--A-CA-A---T
i Ceratotherium_simum.JH767749.1                         I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22565 18 +     27315 AAATC-A-CTCT-G---GG--A-CA-A---T
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 4 C 0
s Cercocebus_atys.KQ010504.1                                144235 18 -   4669795 AAGTT-A-CTCT-G---GGAA---A-A---T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                          209 18 +      3297 AAGTT-A-CTCT-G---GGAA---A-A---T
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3407 18 -     14410 AAGTT-A-CTCT-G---GGAA---A-A---T
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47789 18 -    148725 AAGTT-A-CTCT-G---GGAA---A-A---T
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        30066 18 -     40656 AAGTT-A-CTCT-G---GGAA---A-A---T
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                          10025 18 +     20796 AAGTT-A-CTCT-G---GGAA---A-A---T
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            15139 18 -     17524 AAGTT-A-CTCT-G---GGAG---A-A---T
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30872 18 -     34525 AAGTT-A-CTCT-G---GGAA---A-A---T
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14650 18 -     25376 AAGTT-A-CTCT-G---GGAG---A-A---T
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367239 18 -  39242232 AAGTT-A-CTCT-G---GGAA---A-A---T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272964 18 +  21565898 AAGTT-A-CTCT-G---GGAG---A-A---T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35331 18 -     45857 AAGTT-A-CTCT-G---GGAA---A-A---T
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30232 18 -     32606 AAGTT-A-CTCT-G---GGAA---A-A---T
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6387 18 +      8499 AAGTT-A-CTCT-G---GGAA---A-A---T
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28792 18 +     70610 AAGTT-A-CTCT-G---GGAG---A-A---T
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25754 18 +     36323 AAGTT-A-CTCT-G---GGAG---A-A---T
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15640 18 -     19938 AGATT-A-CTCT-G---GG--AA-A-A---T
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 4 C 0
s Cheracebus_lucifer.k141_2312002                            11323 18 -     32913 AAGTT-A-CTCC-A---GGAA---A-A---T
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21736 18 -     40346 AAGTT-A-CTCC-A---GGAA---A-A---T
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             21990 18 +    216457 AAGTT-A-CTCC-A---GGAA---A-A---T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21780 18 +     39636 AAGTT-A-CTCC-A---GGAA---A-A---T
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33872 18 -     52013 AAGTT-A-CTCC-A---GGAA---A-G---T
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44860 18 -    112038 AAGTT-A-CTCT-G---GGAA---G-A---T
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10410 18 +     34062 AAGTT-A-CTCT-G---GGAA---G-A---T
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346654 18 +  18827391 AAGTT-A-CTCT-G---AGAA---A-A---T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13193 18 -     44032 AAGTT-A-CTCT-G---AGAA---A-A---T
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            308040 18 - 135778131 AAGTT-A-CTCT-G---AGAA---A-A---T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2332 18 +     10270 AAATT-A-CTCT-G---GG--AA-A-A---T
i Choloepus_didactylus.ChoDid_scaffold_147047            I 20 C 0
s Choloepus_hoffmanni.KN194906.1                            609809 18 -    839153 AAATT-A-CTCT-G---GG--AA-A-A---T
i Choloepus_hoffmanni.KN194906.1                         I 20 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2576  9 -      4087 AAGGT-A-TTC--------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          I 2 C 0
s Colobus_angolensis.KN981557.1                             412448 18 -   2368649 AAGTG-A-CTCT-G---GGAA---A-A---T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382330 18 - 200372422 AAGTG-A-CTCT-G---GGAA---A-A---T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5883 18 -     84244 AAGTG-A-CTCT-G---GGAA---A-A---T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810911 18 +  53390261 AAGTC-A-TTCT-G---GG--AA-A-A---T
i Condylura_cristata.JH655891.1                          I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6480 18 -      8242 AAGTC-A-CTCT-G---GG--A-CA-A---T
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 4 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47625 18 -     83289 AAGAT-T-CTCT-G---GG--A-CA-A---T
i Cricetomys_gambianus.CriGam_scaffold_14425             I 3 C 0
s Cricetulus_griseus.LT883664.1                          213119142 18 - 224834208 AAGAT-T-CATT-G---GG--A-TA-A---T
i Cricetulus_griseus.LT883664.1                          I 3 C 0
s Crocidura_indochinensis.CroInd_scaffold_205242                66 18 +      5812 AAGTC-A-TTCT-G---GG--A-CA-A---T
i Crocidura_indochinensis.CroInd_scaffold_205242         I 4 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              8082 18 +     87169 CTGTT-A-CTCT-G---GG--A-CA-A---G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 4 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650362 18 -   1526836 AAGGT-T-CCCT-G---GG--A-TA-A---T
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 3 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  22987 16 +     50838 AAGGT-T-CTCT-GGTATA------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 3 I 2
s Cuniculus_paca.CunPac_flattened_line_7025                  12475 13 +     36344 AAGGT-T-CTCT-G---AG------------
i Cuniculus_paca.CunPac_flattened_line_7025              I 3 I 5
s Dasyprocta_punctata.DasPun_flattened_line_15900            31916 13 +     75252 AAGGT-T-CTCT-G---AG------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 3 I 5
s Dasypus_novemcinctus.JH564415.1                          2113383 18 -   2246927 TGATT-A-CTCT-G---GG--A-GG-A---G
i Dasypus_novemcinctus.JH564415.1                        I 4 C 0
s Delphinapterus_leucas.KZ290073.1                        18635469 18 -  35494412 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Delphinapterus_leucas.KZ290073.1                       I 4 C 0
s Desmodus_rotundus.KZ672289.1                            11869192 18 -  20541912 AAGGC-C-CTCT-G---GG--A-CA-C---T
i Desmodus_rotundus.KZ672289.1                           I 4 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668003 18 -   1390856 AAATC-A-CTCT-G---GG--A-CA-A---T
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 4 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142808 18 -    198055 AAATC-A-CTCT-G---GG--A-CA-A---T
i Diceros_bicornis.DicBicMic_scaffold_5955               I 4 C 0
s Dipodomys_ordii.KN672350.1                              18955731 18 -  37912305 aagat-t-cttt-g---gg---tca-a---T
i Dipodomys_ordii.KN672350.1                             I 251 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                   1335 18 +     14058 aagaT-T-ATTT-G---GG---TCA-A---T
i Dipodomys_stephensi.DipSte_scaffold_77284              I 251 C 0
s Dolichotis_patagonum.DolPat_scaffold_341948                   81 13 -      1676 AAGGC-T-ATCT-G---AG------------
i Dolichotis_patagonum.DolPat_scaffold_341948            I 3 I 5
s Echinops_telfairi.JH980293.1                            62858689 18 - 111700974 ACACC-A-TACT-T---GG--AA-A-A---T
i Echinops_telfairi.JH980293.1                           I 4 C 0
s Eidolon_helvum.AWHC01266696.1                               9877 18 +     19438 aagtc-a-ttct-g---GG---GTG-A---A
i Eidolon_helvum.AWHC01266696.1                          I 4 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       246196 18 -    607251 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Elaphurus_davidianus.JRFZ01104969.1                    I 4 C 0
s Elephantulus_edwardii.JH947257.1                         9114040 18 -  10337057 AAGTC-A-CTAT-G---GT--A-CA-A---T
i Elephantulus_edwardii.JH947257.1                       I 4 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35347 18 +    110024 AAGAT-T-CTCT-G---GG--A-CA-A---T
i Ellobius_lutescens.LOEQ01008920.1                      I 3 C 0
s Ellobius_talpinus.LOJH01026522.1                           17268 18 +     18970 AAGAT-T-CTGT-G---GG--A-CA-A---T
i Ellobius_talpinus.LOJH01026522.1                       I 3 C 0
s Enhydra_lutris.KZ291758.1                               24925732 18 +  41312741 AAGTT-A-CTCT-G---GG--A-CA-A---T
i Enhydra_lutris.KZ291758.1                              I 4 C 0
s Eptesicus_fuscus.JH977646.1                             12582963 18 +  14770903 AAGTC-A-CTCT-G---GG--A-CA-G---T
i Eptesicus_fuscus.JH977646.1                            I 4 C 0
s Equus_asinus.JREZ01000139.1                              3045470 18 -   4378816 AAATC-A-CTCT-G---GG--A-CA-G---T
i Equus_asinus.JREZ01000139.1                            I 4 C 0
s Equus_caballus.CM000403.2                               21379400 18 +  39960074 AAATC-A-CTCT-G---GG--A-CA-G---T
i Equus_caballus.CM000403.2                              I 4 C 0
s Equus_przewalskii.KK951119.1                              415382 18 -    498745 AAATC-A-CTCT-G---GG--A-CA-G---T
i Equus_przewalskii.KK951119.1                           I 4 C 0
s Erinaceus_europaeus.JH835339.1                           3671668 18 +   7059049 AAGTC-A-TTCT-G---GG--A-CA-A---T
i Erinaceus_europaeus.JH835339.1                         I 2 C 0
s Erythrocebus_patas.Contig38                               266182 18 +  21539334 AAGTT-A-CTCT-G---GGAA---A-A---T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74672 18 -    133382 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 4 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2394 18 +     25849 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Eubalaena_japonica.EubJap_flattened_line_57114         I 4 C 0
s Felis_catus.CM001381.2                                 186250821 19 - 206538554 ATGTT-A-CTAT-G---GG--A-CAAA---T
i Felis_catus.CM001381.2                                 I 4 C 0
s Felis_catus_fca126.CM031415.1                          185120777 19 - 205367284 ATGTT-A-CTAT-G---GG--A-CAAA---T
i Felis_catus_fca126.CM031415.1                          I 4 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  1419 19 +     25330 ATGTT-A-CTAT-G---GG--A-CAAA---T
i Felis_nigripes.FelNig_flattened_line_44075             I 4 C 0
s Fukomys_damarensis.KN121974.1                            2926278 13 -   3816255 AAGGT-T-CTCT-C---TG------------
i Fukomys_damarensis.KN121974.1                          I 3 I 2
s Galeopterus_variegatus.GalVar_scaffold_51812                5265 18 -     28519 AAGTT-A-CTCT-G---GG--A-CA-A---T
i Galeopterus_variegatus.GalVar_scaffold_51812           I 4 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2454 18 +    660261 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 4 C 0
s Glis_glis.GliGli_scaffold_163929                            5285  6 -      6791 ------------------G--A-CA-A---T
i Glis_glis.GliGli_scaffold_163929                       I 8 C 0
s Gorilla_beringei.k141_3218903                                954 18 -      2763 AAGTT-A-CTCT-G---GGAA---A-A---T
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                259374 18 - 186649187 AAGTT-A-CTCT-G---GGAA---A-A---T
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    7211  6 -     78134 ------------------G--A-CA-A---T
i Graphiurus_murinus.GraMur_scaffold_10447               I 16 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34454 18 -    327341 ATGTT-A-CTCT-G---GG--AA-A-G---G
i Helogale_parvula.HelPar_flattened_line_2585            I 4 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 16121 18 +     48891 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 4 C 0
s Heterocephalus_glaber.JH602082.1                         1938715 13 -  22651954 AAGGT-T-CCCT-G---TG------------
i Heterocephalus_glaber.JH602082.1                       I 3 I 5
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6437 17 +      8654 --GTCTT-CCCT-G---GG--A-GA-A---T
i Heterohyrax_brucei.HetBruBak_scaffold_116546           I 2 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11507 18 -     36432 AAGTC-A-CTAT-G---GG---GCA-A---T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 4 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                273 18 -      8370 AACTC-A-CTCT-G---GG--A-CA-A---A
i Hipposideros_galeritus.HipGal_scaffold_108494          I 4 C 0
s Hoolock_leuconedys.ctg274                                    145839 18 -    630532 AAGTT-A-CTCT-G---GGAA---A-A---T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  74117 18 +     83186 ATGTT-A-CTCT-G---GG--A-CG-A---G
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 4 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75652 13 +    143317 AAGGC-T-CTCT-G---AA------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 3 I 5
s Hylobates_agilis.k141_1155965                               8886 18 +     12352 AAGTC-A-CTCT-G---GGAA---A-A---T
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              16073 18 +     55766 AAGTC-A-CCCT-G---GGAA---A-A---T
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055601 18 + 191637585 AAGTT-A-CTCT-G---GGAA---A-A---T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804479 18 +  11177569 AAGTT-A-CTCT-G---GGAA---A-A---T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11518 18 -    135385 AAGGT-T-CTCC-G---GG---TTA-A---T
i Hystrix_cristata.HysCri_scaffold_5660                  I 3 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390770 17 +   7955117 AAGAT-T-CTC--G---GA--A-CA-A---T
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13573 18 -     16823 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Inia_geoffrensis.IniGeo_flattened_line_69447           I 4 C 0
s Jaculus_jaculus.JH725527.1                               1243254 18 +   9596543 AAGAT-T-CTCT-G---GT--A-TA-C---T
i Jaculus_jaculus.JH725527.1                             I 6 I 3
s Kogia_breviceps.KogBre_flattened_line_3970                 75411 18 -     97402 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Kogia_breviceps.KogBre_flattened_line_3970             I 4 C 0
s Lagothrix_lagothricha.k141_246028                          45697 18 +    110728 AAGTT-A-CTCC-A---GGAA---A-A---T
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1650 18 -     25587 AAGTC-A-CTCT-G---GG--A-CA-G---T
i Lasiurus_borealis.LasBor_scaffold_61236                I 4 C 0
s Leontocebus_fuscicollis.k141_3470480                        1142 18 -     23187 AAGTT-A-CTCC-A---GGAA---A-A---T
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1456 18 -     14280 AAGTT-A-CTCC-A---GGAA---A-A---T
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                        1096 18 +      3713 AAGTT-A-CTCC-A---GGAA---A-G---T
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1282 18 +      8855 AAGTT-A-CTCC-G---GGAA---A-A---T
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         6083 18 -     13645 AAGTT-A-CTCC-G---GGAA---A-A---T
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        817002 18 -   3914936 AAGTT-A-CTCT-G---GG---GCA-A---T
i Leptonychotes_weddellii.KB714746.1                     I 4 C 0
s Lepus_americanus.LepAme_scaffold_56121                     23280  6 +     24238 ------------------G--A-CA-A---T
i Lepus_americanus.LepAme_scaffold_56121                 I 16 C 0
s Lipotes_vexillifer.KE559953.1                             344755 18 +    662738 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Lipotes_vexillifer.KE559953.1                          I 4 C 0
s Lophocebus_aterrimus.ctg367                               337112 18 -   1826925 AAGTT-A-CTCT-G---GGAA---A-A---T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39088177 18 +  43346337 AAGTC-A-CTCC-G---GG--AA-A-A---T
i Loxodonta_africana.GL010049.1                          I 4 C 0
s Lycaon_pictus.CM007581.1                                41618406 18 +  59628241 AAGTT-A-TTCT-G---GG--A-CA-A---T
i Lycaon_pictus.CM007581.1                               I 4 C 0
s Macaca_arctoides.k141_1757516                              48509 18 -     61512 AAGTT-A-CTCT-G---GGAA---A-A---T
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 376171 18 -  60120075 AAGTT-A-CTCT-G---GGAA---A-A---T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28439 18 +     30207 AAGTT-A-CTCT-G---GGAA---A-A---T
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3277 18 -      5035 AAGTT-A-CTCT-G---GGAA---A-A---T
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28392 18 +     30527 AAGTT-A-CTCT-G---GGAA---A-A---T
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39568 18 -     50087 AAGTT-A-CTCT-G---GGAA---A-A---T
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49313 18 +     51645 AAGTT-A-CTCT-G---GGAA---A-A---T
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418515 18 - 187317192 AAGTT-A-CTCT-G---GGAA---A-A---T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402746 18 +  25927173 AAGTT-A-CTCT-G---GGAA---A-A---T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51917 18 -     62418 AAGTT-A-CTCT-G---GGAA---A-A---T
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4448 18 +     14901 AAGTT-A-CTCT-G---GGAA---A-A---T
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48390 18 +     59329 AAGTT-A-CTCT-G---GGAA---A-A---T
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274297 18 +    668171 AAGTT-A-CTCT-G---GGAA---A-A---T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2929 18 -      5049 AAGTT-A-CTCT-G---GGAA---A-A---T
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 6096 18 +     17132 AAGTT-A-CTCT-G---GGAA---A-A---T
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226850 18 -    270270 AAGTG-A-CTCT-G---GG--A-TG-A---T
i Macroglossus_sobrinus.MacSob_scaffold_4024             I 4 C 0
s Mandrillus_leucophaeus.scaffold280                        325579 18 +  24302211 AAGTT-A-CTCT-G---GGAA---A-A---T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360410 18 -    752769 AAGTT-A-CTCT-G---GGAA---A-A---T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             677035 12 -    737560 --------CTGT-G---GG--A-CA-A---T
i Manis_javanica.JSZB01003497.1                          I 9 C 0
s Manis_pentadactyla.KN006162.1                             224331 12 +    317179 --------CTGT-G---GG--A-CA-A---T
i Manis_pentadactyla.KN006162.1                          I 9 C 0
s Marmota_marmota.CZRN01000018.1                           7504970 17 +  40650429 AAGAT-T-CTC--A---GA--A-CA-A---T
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       154176 18 +    207569 AAGTT-A-TTCT-G---GG--A-CA-A---T
i Megaderma_lyra.MegLyr_scaffold_4542                    I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29744 18 -     74585 AAGTT-A-TTCT-G---GG--A-CA-A---A
i Mellivora_capensis.MelCap_flattened_line_19308         I 4 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53327 19 -    140813 AAGAT-T-CTCT-G---GG--AAAA-A---T
i Meriones_unguiculatus.MerUng_scaffold_7390             I 3 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     91038 18 +     93471 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Mesoplodon_bidens.MesBid_scaffold_6114                 I 4 C 0
s Mico_argentatus.k141_582562                                12692 18 +     17804 AAGTC-A-CTCC-G---GGAA---A-A---T
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                419 18 +      5551 AAGTC-A-CTCC-G---GGAA---A-A---T
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21503 18 -     26561 AAGTC-A-CTCC-G---GGAA---A-A---T
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49870 18 +    145209 ACATA-A-TACT-T---GG--AA-A-A---T
i Microgale_talazaci.MicTal_scaffold_6613                I 4 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188771 18 +    200668 AAGGT-A-CTCT-G---GT--A-CA-G---T
i Micronycteris_hirsuta.MicHir_scaffold_2233             I 4 C 0
s Microtus_ochrogaster.CM001695.1                         15966754 19 +  27267610 AAGAT-TTTTGT-G---GG--A-CA-A---T
i Microtus_ochrogaster.CM001695.1                        I 3 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368591 18 -   8254450 AAGTC-A-CTCT-G---GG--A-CA-C---T
i Miniopterus_natalensis.LDJU01000034.1                  I 4 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46322 18 -     48117 AAGTC-A-CTCT-G---GG--A-CA-C---T
i Miniopterus_schreibersii.MinSch_scaffold_23309         I 4 C 0
s Miopithecus_ogouensis.k141_1534655                         25678 18 -     27822 AAGTT-A-CTCT-G---GGAA---A-A---T
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12235 18 +     27589 AAGTT-A-CTCT-G---GG---GCA-A---T
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 4 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   363147 18 +    437263 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Monodon_monoceros.MonMon_M_scaffold_103                I 4 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183216 18 +    366855 AGGTC-T-CTCT-G---GG--A-CA-C---T
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 4 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32352 18 -     82753 AAGTC-A-TTGT-G---GG--A-CA-A---T
i Moschus_moschiferus.MosMos_scaffold_13123              I 4 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   22204 18 -     63510 ATGTT-A-CTCT-G---GG--A-CA-G---G
i Mungos_mungo.MunMun_flattened_line_18455               I 4 C 0
s Murina_feae.MurFea_scaffold_17764                          45579 18 +     47283 AAGTC-A-CTCT-G---GG--A-CA-C---T
i Murina_feae.MurFea_scaffold_17764                      I 4 C 0
s Mus_caroli.LT608237.1                                   35597947 18 + 120012414 AAGAA-T-CTCT-G---GG--A-CA-A---T
i Mus_caroli.LT608237.1                                  I 3 C 0
s Mus_musculus.chr8                                       41691489 18 + 129401213 AAGAG-T-CTCT-G---GG--A-CA-A---T
i Mus_musculus.chr8                                      I 3 C 0
s Mus_pahari.LT608297.1                                   58219448 18 +  89631738 AAGAG-T-CTCT-G---GG--A-CA-A---T
i Mus_pahari.LT608297.1                                  I 3 C 0
s Mus_spretus.CM004101.1                                  39500408 18 + 130317789 AAGAG-T-CTCT-G---GG--A-CA-A---T
i Mus_spretus.CM004101.1                                 I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3299  6 -    124358 ------------------G--A-CA-A---T
i Muscardinus_avellanarius.MusAve_scaffold_5560          I 8 C 0
s Mustela_putorius.JH418006.1                             14358694 18 +  14710649 AAATT-A-CTCT-G---GG--A-CA-A---T
i Mustela_putorius.JH418006.1                            I 4 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1373 16 -     27262 AAGGT-T-CTCT-GGAATA------------
i Myocastor_coypus.MyoCoy_scaffold_57531                 I 3 I 2
s Myotis_brandtii.KE162005.1                               9797584 18 +  10118263 AAGTC-A-CTCT-G---GG--A-CA-C---T
i Myotis_brandtii.KE162005.1                             I 4 C 0
s Myotis_davidii.KB100139.1                                4391758 18 +   6019432 AAGTC-A-CTCT-G---GG--A-CA-C---T
i Myotis_davidii.KB100139.1                              I 4 C 0
s Myotis_lucifugus.GL429869.1                               387797 18 +   4330536 AAGTC-A-CTCT-G---GG--A-CA-C---T
i Myotis_lucifugus.GL429869.1                            I 4 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6584 18 +     18357 AAGTC-A-CTCT-G---GG--A-CA-C---T
i Myotis_myotis.MyoMyo_scaffold_66571                    I 4 C 0
s Nannospalax_galili.KL204047.1                             950348 18 +   3037898 AAGAT-T-CTCT-G---AG--A-CA-A---T
i Nannospalax_galili.KL204047.1                          I 3 C 0
s Nasalis_larvatus.k141_1350636                              32463 18 +     34575 AAGTT-A-CTCT-G---GGAA---A-A---T
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469682 18 -  31847680 AAGTT-A-CTCT-G---GG---GCA-A---T
i Neomonachus_schauinslandi.NINY01007730.1               I 4 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235805 18 -   7148211 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Neophocaena_asiaeorientalis.KZ687982.1                 I 4 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131496 18 -    149072 AAGTC-A-CTCC-A---GA--A-CA-C---T
i Noctilio_leporinus.NocLep_scaffold_7894                I 4 C 0
s Nomascus_annamensis.k141_1771965                           56774 18 -    132029 AAGTT-A-CTCT-G---GGAA---A-A---T
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12869 18 -     16345 AAGTT-A-CTCT-G---GGAA---A-A---T
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18758 18 +     22201 AAGTT-A-CTCT-G---GGAA---A-A---T
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8416988 18 -  22158432 AAGTT-A-CTCT-G---GGAA---A-A---T
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29163 18 -     54323 AAGTT-A-CTCT-G---GGAA---A-A---T
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                202111 18 +   9404916 AAGTT-A-TTCT-G---GG--A-CA-A---T
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 4 C 0
s Octodon_degus.JH651603.1                                11059647 16 -  11899542 AACGT-T-CTCT-GGGATA------------
i Octodon_degus.JH651603.1                               I 3 I 2
s Odobenus_rosmarus.KB229312.1                             1455451 18 +   2017862 AAGTT-A-CTCC-A---GG---GCA-A---T
i Odobenus_rosmarus.KB229312.1                           I 4 C 0
s Odocoileus_virginianus.KZ100018.1                         442748 18 -    630418 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Odocoileus_virginianus.KZ100018.1                      I 4 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22405 18 +    150152 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Okapia_johnstoni.LVCL01S0005463.1                      I 4 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97371 18 -    140218 AAGAT-T-CTGT-A---GA--A-CC-A---T
i Ondatra_zibethicus.OndZib_scaffold_7387                I 3 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7914 18 -     41509 GAGAT-T-CTTC-A---GG--A-CA-A---T
i Onychomys_torridus.OnyTor_scaffold_28377               I 3 C 0
s Orcinus_orca.KB316932.1                                  8106218 18 +  10937097 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Orcinus_orca.KB316932.1                                I 4 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3208 18 +     11607 AAGTC-A-CTCT-G---GG--AA-A-A---T
i Orycteropus_afer.OryAfe_flattened_line_201229          I 4 C 0
s Oryctolagus_cuniculus.CM000791.1                       107109569  6 - 174332312 ------------------G--A-CA-A---T
i Oryctolagus_cuniculus.CM000791.1                       I 16 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        43273 18 +    559221 aagtt-a-ttct-g---GG--A-CA-A---T
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 C 0
s Ovis_aries.CM001607.2                                   26411147 18 -  44047080 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Ovis_aries.CM001607.2                                  I 4 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11770 18 +     17875 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Ovis_canadensis.OviCan_scaffold_67953                  I 4 C 0
s Pan_paniscus.AJFE02004363.1                                  764 18 +      1263 AAGTT-A-CTCT-G---GGAA---A-A---T
i Pan_paniscus.AJFE02004363.1                            I 88 I 14
s Pan_troglodytes.KZ622849.1                                 38128 18 -    110857 AAGTT-A-CTCT-G---GGAA---A-A---T
i Pan_troglodytes.KZ622849.1                             I 27 I 182
s Panthera_onca.PanOnc_flattened_line_3271                   28751 19 -    230217 ATGTT-A-CTAT-G---GG--A-CAAA---T
i Panthera_onca.PanOnc_flattened_line_3271               I 4 C 0
s Panthera_pardus.KV860321.1                              18465992 19 -  18783137 ATGTT-A-CTAT-G---GG--A-CAAA---T
i Panthera_pardus.KV860321.1                             I 4 C 0
s Panthera_tigris.KE722367.1                               3976591 19 +   8748460 ATGTT-A-CTAT-G---GG--A-CAAA---T
i Panthera_tigris.KE722367.1                             I 4 C 0
s Pantholops_hodgsonii.KE114653.1                          1622665 18 +   2937107 AAGTC-A-CTGT-G---AG--A-CA-A---T
i Pantholops_hodgsonii.KE114653.1                        I 4 C 0
s Papio_anubis.CM001495.2                                   246594 18 - 183742232 AAGTT-A-CTCT-G---GGAA---A-A---T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12879 18 +     21308 AAGTT-A-CTCT-G---GGAA---A-A---T
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295622 18 -  20919399 AAGTT-A-CTCT-G---GGAA---A-A---T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25521 18 -     27687 AAGTT-A-CTCT-G---GGAA---A-A---T
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2198 18 +     10553 AAGTT-A-CTCT-G---GGAA---A-A---T
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  2159 18 -     10386 AAGTT-A-CTCT-G---GGAA---A-A---T
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18872 18 +     78924 ATATT-A-CTCT-G---GG--AA-A-A---T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7860  7 +      9367 AAGAT-T-C----------------------
i Perognathus_longimembris.PerPac_flattened_line_89005   I 168 C 0
s Peromyscus_maniculatus.KI615324.1                         251095 18 +  18517816 GAGAT-T-CTTC-G---GA--A-CA-A---T
i Peromyscus_maniculatus.KI615324.1                      I 3 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35712  5 -     56120 AAGAT--------------------------
i Petromus_typicus.PetTyp_scaffold_17301                 I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7739 18 -     63832 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 4 C 0
s Piliocolobus_badius.k141_2704958                            5844 18 +     55023 AAGTG-A-CTCT-G---GGAA---A-A---T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5367 18 -     89929 AAGTG-A-CTCT-G---GGAA---A-A---T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5955 18 +     40849 AAGTG-A-CTCT-G---GGAA---A-A---T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257684 18 +  14605196 AAGTG-A-CTCT-G---GGAA---A-A---T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             8074 18 +     22231 AAGTC-A-CTCT-G---GG---GCA-T---T
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        I 4 C 0
s Pithecia_albicans.k141_1239476                             67209 18 +    207309 AAGTT-A-CTCC-G---GGAA---A-A---T
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8304 18 -     25401 AAGTT-A-CTCC-G---GGAA---A-A---T
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               34050 18 +     58159 AAGTT-A-CTCC-G---GGAA---A-A---T
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34326 18 +     63561 AAGTT-A-CTCC-G---GGAA---A-A---T
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           34081 18 +     51148 AAGTT-A-CTCC-G---GGAA---A-A---T
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              559057 18 -   4542175 AAGTT-A-CTCC-G---GGAA---A-A---T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           34065 18 +     51125 AAGTT-A-CTCC-G---GGAA---A-A---T
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            4987 18 +     19503 AAGTC-T-CTGT-G---GG--A-CA-A---T
i Platanista_gangetica.PlaMin_flattened_line_83166       I 4 C 0
s Plecturocebus_bernhardi.k141_2549090                       10497 18 +     39866 AAGTT-A-CTCC-A---GGAA---A-A---T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5579 18 -      9282 AAGTT-A-CTCC-A---GGAA---A-A---T
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       44983 18 -     87950 AAGTT-A-CTCC-A---GGAA---A-A---T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45377 18 -     88961 AAGTT-A-CTCC-A---GGAA---A-A---T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10075 18 -     39403 AAGTT-A-CTCC-A---GGAA---A-A---T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          45027 18 +     87928 AAGTT-A-CTCC-A---AGAA---A-A---T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         10074 18 -     60166 AAGTT-A-CTTC-A---GGAA---A-A---T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      16995 18 -     67232 AAGTT-A-CTCC-A---GGAA---A-A---T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44927 18 -     90634 AAGTT-A-CTCC-A---GGAA---A-A---T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46394 18 +     89403 AAGTT-A-CTCC-A---GGAA---A-A---T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182534 18 - 189387572 AAGTT-A-CTCT-G---GGAA---A-A---T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197276 18 -   9816681 AAGTT-A-CTCT-G---GGAA---A-A---T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              31042 18 +     69807 AAGTT-A-CTCT-G---GGAA---A-A---T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48225 18 -     80239 AAGTT-A-CTCT-G---GGAA---A-A---T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2969 17 -     12774 --GTCTT-CCCT-G---GG--A-GA-A---T
i Procavia_capensis.ProCapCap_scaffold_128773            I 2 C 0
s Psammomys_obesus.NESX01036366.1                            40860 19 +     52041 AAGAT-T-CTCT-G---GG--AAAA-A---T
i Psammomys_obesus.NESX01036366.1                        I 3 C 0
s Pteronotus_parnellii.KE847780.1                            55855 18 -     66298 AAGTC-A-CTTT-G---GG--A-TA-C---T
i Pteronotus_parnellii.KE847780.1                        I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8229 18 -     18639 AAGTT-A-CTCC-G---GG--A-CA-A---T
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 4 C 0
s Pteropus_alecto.KB030862.1                               5844425 18 -  28871421 AAGTC-A-CTCT-G---GG--A-CG-A---T
i Pteropus_alecto.KB030862.1                             I 4 C 0
s Pteropus_vampyrus.KN525825.1                             3540941 18 -   4952924 AAGTC-A-CTCT-G---GG--A-CA-A---T
i Pteropus_vampyrus.KN525825.1                           I 4 C 0
s Puma_concolor.QAVW01001104.1                            18102984 19 +  38429054 ATGTT-A-CTAT-G---GG--A-CAAA---T
i Puma_concolor.QAVW01001104.1                           I 4 C 0
s Pygathrix_cinerea.k141_1153803                             30411 18 +     91421 AAGTT-A-CTCT-G---GGAA---A-A---T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156962 18 -   7812017 AAGTT-A-CTCT-G---GGAA---A-A---T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11262 18 +     72585 AAGTT-A-CTCT-G---GGAA---A-A---T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5266 18 -     55207 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 4 C 0
s Rattus_norvegicus.chr16                                 37026062 18 -  90668790 AAGAT-T-CTCT-G---GG--A-CA-A---T
i Rattus_norvegicus.chr16                                I 3 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918324 18 +   3329780 AAATC-A-CTCT-G---GG--A-CA-G---T
i Rhinolophus_sinicus.LVEH01000134.1                     I 4 C 0
s Rhinopithecus_bieti.k119_778604                             4868 18 +      7119 AAGTT-A-CTCT-G---GGAA---A-A---T
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125538 18 + 195417433 AAGTT-A-CTCT-G---GGAA---A-A---T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239710 18 -   7961872 AAGTT-A-CTCT-G---GGAA---A-A---T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79171 18 -    116970 AAGTC-A-CTCT-G---GA--A-TG-A---T
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             I 4 C 0
s Saguinus_bicolor.k141_161125                                9769 18 +     12412 AAGTT-A-CTCC-A---GGAA---A-G---T
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                              1091 18 +      9876 AAGTT-A-CTCC-A---GGAA---A-G---T
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16687 18 -     24931 AAGTT-A-CTCA-A---CGAA---A-G---T
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1566 18 +      4564 AAGTT-A-CTCC-A---GGAA---A-G---T
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4371 18 -      7443 AAGTT-A-CTCC-A---GGAA---A-G---T
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395404 18 - 209938924 AAGTT-A-CTCC-A---GGAA---A-G---T
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                1988 18 +     10149 AAGTT-A-CTCC-A---GGAA---A-G---T
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1332 18 +     10417 AAGTT-A-CTCC-A---GGAA---A-G---T
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14717 18 +     16473 AAGTC-A-CTGT-G---GG--A-CA-A---C
i Saiga_tatarica.SaiTat_scaffold_39512                   I 4 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111456 18 + 121099817 AAGTT-A-CTCC-G---GGAA---A-A---T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       33025 18 -     47369 AAGTT-A-CTCC-G---GGAA---A-A---T
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33408 18 -     79414 AAGTT-A-CTCC-G---GGAA---A-A---T
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              30099 18 -     34454 AAGTT-A-CTCC-G---GGAA---A-A---T
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17501 18 -     22428 AAGTT-A-CTCC-G---GGAA---A-A---T
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32655 18 -     47109 AAGTT-A-CTCC-G---GGAA---A-A---T
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240679 18 +   5703754 AAGTT-A-CTCC-G---GGAA---A-A---T
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10270 18 +     21866 AAGTT-A-CTCC-G---GGAA---A-A---T
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122762 18 +    313613 AAGTC-A-TTCT-G---GG--AA-A-A---T
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 4 C 0
s Semnopithecus_entellus.k141_583282                          1842 18 +     11297 AAGTT-A-CTCT-G---GGAA---A-A---T
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32235 18 +     58920 AAGTT-A-CTCT-G---GGAA---A-A---T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18733 18 -     45317 AAGTT-A-CTCT-G---GGAA---A-A---T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26391 18 -     42441 AAGTT-A-CTCT-G---GGAA---A-A---T
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1669243                      4032 18 -      6251 AAGTT-A-CTCT-G---GGAA---A-A---T
i Semnopithecus_schistaceus.k141_1669243                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          32155 18 -     48123 AAGTT-A-CTCT-G---GGAA---A-A---T
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52916 18 +     77746 GAAAT-T-CTTT-G---GG--A-CA-G---T
i Sigmodon_hispidus.SigHis_scaffold_20193                I 3 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867524 16 -   1910179 --ATC-A-TTCT-G---GG--A-CA-A---T
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 C 0
s Sorex_araneus.JH798187.1                                 4674742 18 +  18376816 GAGTC-A-TTCT-G---GG--A-CA-A---T
i Sorex_araneus.JH798187.1                               I 4 C 0
s Spermophilus_dauricus.KZ294078.1                         1872333 17 +   3870691 AAGAT-T-CTC--G---GA--A-CA-A---T
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16446 18 -     97271 AAGTT-A-CTCT-G---GG--A-CA-A---T
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 4 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             129080 18 +    196729 ATGTT-A-CTCT-G---GG--A-CA-G---G
i Suricata_suricatta.SurSur_flattened_line_6629          I 4 C 0
s Sus_scrofa.CM000828.4                                    6648358 18 +  69701581 AAGTC-A-CTGT-G---GG--A-CC-A---T
i Sus_scrofa.CM000828.4                                  I 4 C 0
s Symphalangus_syndactylus.tarseq_199                       394245 18 +   1523678 AAGTT-A-CTCT-G---GGAA---A-A---T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      195191 18 +    199430 ACATC-A-CTCT-G---GG--A-CA-A---T
i Tapirus_indicus.TapInd_scaffold_7432                   I 4 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    109171 18 -    539355 ACATC-A-CTCT-G---GG--A-CA-A---T
i Tapirus_terrestris.TapTer_scaffold_755                 I 4 C 0
s Tarsius_lariang.k141_1733899                                4784 18 +      9917 AAGTT-A-CTCT-G---GGAA---A-A---T
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11580 18 +     20590 AAGTT-A-CTCT-G---GGAA---A-A---T
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356405 18 - 186847797 AAGTT-A-CTCT-G---GGAA---A-A---T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              28018 12 -     33621 AAGGT-T-CTCT-C---T-------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 3 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22749 18 -     31044 AGATT-A-CTCT-G---GG--AA-A-A---A
i Tolypeutes_matacus.TolMat_scaffold_31955               I 4 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    484101 18 -    610378 AAGGC-A-CTCT-G---GG--A-CA-C---T
i Tonatia_saurophila.TonSau_scaffold_294                 I 4 C 0
s Trachypithecus_auratus.k141_1189070                        24144 18 +     26378 AAGTT-A-CTCT-G---GGAA---A-A---T
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36942 18 -     78344 AAGTT-A-CCCT-G---GGAA---A-A---T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23469 18 +     25722 AAGTT-A-CTCT-G---GGAA---A-A---T
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31898 18 -     62838 AAGTT-A-CTCT-G---GGAA---A-A---T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31889 18 +     46913 AAGTT-A-CTCT-G---GGAA---A-A---T
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12627 18 -     28527 AAGTT-A-CTCT-G---GGAA---A-A---T
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33829 18 -     64340 AAGTT-A-CTCT-G---GGAA---A-A---T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31867 18 -     63452 AAGTT-A-CTCT-G---GGAA---A-A---T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13318 18 +     22490 AAGTT-A-CTCT-G---GGAA---A-A---T
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1284 18 +      9911 AAGTT-A-CTCT-G---GGAA---A-A---T
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                         1079 18 -     33539 AAGTT-A-CTCT-G---GGAA---A-A---T
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258838 18 -   6242583 AAGTT-A-CCCT-G---GGAA---A-A---T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4857 18 +     19340 AAGTT-A-CTCT-G---GGAA---A-A---T
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177962 16 -    200418 --GTC-A-TTGT-G---GG--A-TA-A---T
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485775 18 -  10818551 AAGTC-A-CTCC-G---GG--AA-A-A---T
i Trichechus_manatus.JH594705.1                          I 4 C 0
s Tupaia_chinensis.KB320699.1                              1840020 16 -   4065304 AAGTT-A-CTCT-G---GG--A-TC------
i Tupaia_chinensis.KB320699.1                            I 1 C 0
s Tupaia_tana.TupTan_flattened_line_394                      14095 16 -     70247 AAGTT-A-CTCT-G---GG--A-TC------
i Tupaia_tana.TupTan_flattened_line_394                  I 3 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369342 18 -  33153633 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Tursiops_truncatus.MRVK01000835.1                      I 4 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7529 18 -     21056 AAGTC-A-TTCT-G---GG--AA-A-A---T
i Uropsilus_gracilis.UroGra_scaffold_46687               I 2 C 0
s Ursus_maritimus.KK499267.1                                185654 18 +   5085361 AAGTT-A-CTCT-G---GG--A-CA-A---C
i Ursus_maritimus.KK499267.1                             I 4 C 0
s Vicugna_pacos.KN270157.1                                   80475 18 +   5488506 GAGTC-A-CTGT-G---AG--A-CA-A---T
i Vicugna_pacos.KN270157.1                               I 4 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                109005 18 -    112863 AAGTT-A-TTCT-C---GG--A-CA-A---T
i Vulpes_lagopus.VulLag_flattened_line_12041             I 4 C 0
s Xerus_inauris.XerIna_scaffold_2302                        178200 18 -    224448 ATAAT-T-CTC-TG---GG--A-CA-A---T
i Xerus_inauris.XerIna_scaffold_2302                     I 3 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32657 18 -     86975 AAGTT-A-CTCC-A---GG---GCA-A---T
i Zalophus_californianus.ZalCal_flattened_line_17732     I 4 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       4704 18 -     63895 AAGAT-T-CTTT-G---GC--A-TA-C---C
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 6 I 233
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1303 18 +      3447 AAGTC-A-CTGT-G---GG--A-CA-A---T
i Ziphius_cavirostris.ZipCav_flattened_line_334639       I 4 C 0
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Tadarida_brasiliensis.TadBra_scaffold_54991                17787  4 +     22964 I
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      10219  8 +     36723 GC-C---T-----T-AG-G
s Acinonyx_jubatus.LLWD01001279.1                           816762  8 +   1699592 AC-C---T-----T-AG-G
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     28950  8 +     63021 CC-C---T-----T-GG-T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419218  8 +  29979442 AC-C---C-----G-AG-G
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            219217  8 +    347723 AC-C---T-----T-AG-G
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    21727  4 -     61208 -------------T-AG-G
i Allactaga_bullata.AllBul_scaffold_20030                I 3 C 0
s Allenopithecus_nigroviridis.k141_3755588                   51169  8 +     53615 AC-C---T-----T-AG-G
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3197  8 +     13857 AC-C---T-----T-AG-G
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19753  8 -     21945 AC-C---T-----T-AG-G
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21438  8 +     32033 AC-C---T-----T-AG-G
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74693  8 -     84148 AC-C---T-----T-AG-G
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46947  8 -     78289 AC-C---T-----T-AG-G
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46363  8 +     55831 AC-C---T-----T-AG-G
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44825  8 -     64179 AC-C---T-----T-AG-G
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1928  8 -      3959 AC-C---T-----T-AG-G
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43450  8 +     45454 AC-C---T-----T-AG-G
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              49099  8 +     70886 AC-C---T-----T-AG-G
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11269  8 +     30854 AC-C---T-----T-AG-G
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35405  8 +     42133 AC-C---T-----T-AG-G
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592424  8 +   2318259 AC-C---A-----T-AA-A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180828  8 -    412891 AC-T---G-----T-AG-G
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53580  8 -     68529 AC-T---G-----T-AA-A
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3610  8 +     17741 AC-C---T-----T-AG-G
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4235  8 -     15923 AT-C---T-----T-AG-A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674517  8 +   5030052 AC-C---T-----T-AG-G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4511  8 -     16391 AT-C---T-----T-AG-G
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               4070  8 -     17186 AT-C---T-----T-AG-G
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27677  8 -     32367 AC-C---T-----T-AG-G
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9344  2 -     15198 AC-----------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               277168  8 +  21539123 AC-C---T-----T-AG-G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13333  8 +     48076 AC-C---T-----T-AG-G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8469  8 -     28759 AC-C---T-----T-AG-G
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              36025  8 +     44353 AC-C---T-----T-CG-G
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51395  8 -     71267 AC-C---T-----T-AG-G
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25453  8 -     33135 AC-C---T-----T-AG-G
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7967075  8 -  23207421 AT-C---G-----T-AA-G
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3576  8 -     25979 AT-C---G-----T-AA-G
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93411  8 +    124022 GC-C---G-----T-AA-A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36600  8 +    288883 AC-C---G-----T-AA-A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423753  8 -  48749331 AC-C---G-----T-AA-A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      769354  8 +   1948126 AC-C---G-----T-AA-A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559899  8 -  45695690 AC-C---G-----T-AA-A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536580  8 -   4408762 AC-C---G-----T-AA-A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                  10247  8 +     28062 AC-C---T-----T-AG-G
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45538  8 -     91139 AC-C---T-----T-AG-G
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  23065  8 +     95584 AC-C---T-----T-AG-G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22978  8 +    119600 AC-C---T-----T-AG-G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12601  8 +     18648 AC-C---T-----T-AG-G
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             12104  8 -     13885 AC-C---T-----T-AG-G
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            4315  8 -      8861 AC-C---T-----T-AG-G
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456657  8 + 189096842 AC-C---T-----T-AG-G
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               4231  8 +      8664 AC-C---T-----T-AG-G
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7635119  8 +  17673402 AT-C---G-----T-AA-G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4669420  8 +   7040546 AT-C---G-----T-AA-G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1213118  8 +   1652518 AT-C---G-----T-AA-G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42509156  8 +  60362399 AA-C---T-----T-TG-G
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12791  8 -     23171 AA-C---T-----T-TG-G
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          226132  8 +   9314153 AA-C---T-----T-TG-G
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41619269  8 +  59632846 AA-C---T-----T-TG-G
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110850  8 -  63665305 AA-C---T-----T-TG-G
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416428  8 -  46296322 AC-C---A-----T-AA-A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598425  8 +  44709034 AC-C---A-----T-AA-A
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2333  9 -     20114 AC-C---T-----T-AGAG
i Capromys_pilorides.CapPil_scaffold_26391               I 2 C 0
s Carlito_syrichta.NW_007259797.1                           274611  8 +    496798 AC-C---T-----T-AG-G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               4217  8 +      9923 AC-T---G-----T-AG-G
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31709  8 -     39886 AC-C---T-----C-AG-G
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83428  8 -    217609 GC-C---G-----T-AA-G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              5000300  8 +  23392119 NN-N---N-----N-NN-N
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                               5003741  8 +  23407841 AT-T---T-----T-AG-G
i Cavia_porcellus.DS562891.1                             I 5 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          626  8 -    143979 AC-T---T-----T-AG-G
i Cavia_tschudii.CavTsc_scaffold_8919                    I 5 C 0
s Cebuella_niveiventris.k141_592277                           7572  8 -     12580 AC-C---T-----T-AG-G
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45681  8 +     53515 AC-C---T-----T-AG-G
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376307  8 -  26074798 AC-C---T-----T-AG-G
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10376  8 -     34880 AC-C---T-----T-AG-G
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69474  8 -     89041 AC-C---T-----T-AG-G
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2274  8 -     76265 AC-C---T-----T-AG-G
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495750  8 -  27778364 GC-T---T-----T-AG-G
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22583  8 +     27315 GC-T---T-----T-AG-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                144253  8 -   4669795 AC-C---T-----T-AG-G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                          227  8 +      3297 AC-C---T-----T-AG-G
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3425  8 -     14410 AC-C---T-----T-AG-G
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47807  8 -    148725 AC-C---T-----T-AG-G
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        30084  8 -     40656 AC-C---T-----T-AG-G
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                          10043  8 +     20796 AC-C---T-----T-AG-G
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            15157  8 -     17524 AC-C---T-----G-AG-G
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30890  8 -     34525 AC-C---T-----T-AG-G
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14668  8 -     25376 AC-C---T-----T-AG-G
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367257  8 -  39242232 AC-C---T-----T-AG-G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272982  8 +  21565898 AC-C---T-----T-AG-G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35349  8 -     45857 AC-C---T-----T-AG-G
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30250  8 -     32606 AC-C---T-----T-AG-G
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6405  8 +      8499 AC-C---T-----T-AG-G
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28810  8 +     70610 AC-C---T-----T-AG-G
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25772  8 +     36323 AC-C---T-----G-AG-G
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15658  8 -     19938 CC-C---T-----T-AG-A
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            11341  8 -     32913 AC-C---T-----T-AG-G
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21754  8 -     40346 AC-C---T-----T-AG-G
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             22008  8 +    216457 AC-C---T-----T-AG-G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21798  8 +     39636 AC-C---T-----T-AG-G
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33890  7 -     52013 AC-C---T-----T--G-G
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44878  8 -    112038 AC-C---T-----T-AG-G
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10428  8 +     34062 AC-C---T-----T-AG-G
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346672  8 +  18827391 AC-C---T-----T-AG-G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13211  8 -     44032 AC-C---T-----T-AG-G
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            308058  8 - 135778131 AC-C---T-----T-AG-G
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2350  8 +     10270 AC-C---G-----T-AC-A
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            609827  8 -    839153 AC-C---G-----T-AC-A
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Colobus_angolensis.KN981557.1                             412466  8 -   2368649 AC-C---T-----T-AG-G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382348  8 - 200372422 AC-C---T-----T-AG-G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5901  8 -     84244 AC-C---T-----T-AG-G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810929  8 +  53390261 GT-G---T-----T-AG-A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6498  8 -      8242 GC-T---T-----T-AT-G
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47643  8 -     83289 AC-C---T-----T-AT-T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213119160 11 - 224834208 GC-CTTCT-----T-AG-G
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_205242                84  8 +      5812 AT-C---T-----A-AG-A
i Crocidura_indochinensis.CroInd_scaffold_205242         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              8100  8 +     87169 AC-C---T-----T-AG-G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650380  9 -   1526836 GCCT---T-----T-AA-G
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  23005  8 +     50838 AC-C---T-----T-AG-G
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 2 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12493  8 +     36344 AC-T---T-----T-AG-G
i Cuniculus_paca.CunPac_flattened_line_7025              I 5 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31934  8 +     75252 AC-T---T-----T-AG-G
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 5 C 0
s Dasypus_novemcinctus.JH564415.1                          2113401  8 -   2246927 AC-C---T-----T-AG-A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635487  8 -  35494412 AT-C---G-----T-AA-G
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11869210  8 -  20541912 AC-T---G-----T-AG-G
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668021  8 -   1390856 AC-T---T-----T-AG-G
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142826  8 -    198055 AC-T---T-----T-AG-G
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955749  8 -  37912305 AC-C---T-----T-GG-A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                   1353  8 +     14058 AC-C---T-----T-GG-A
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_341948                   99  8 -      1676 AG-T---T-----T-AG-G
i Dolichotis_patagonum.DolPat_scaffold_341948            I 5 C 0
s Echinops_telfairi.JH980293.1                            62858707  8 - 111700974 AC-C---T-----T-AG-G
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9895  8 +     19438 AC-C---T-----T-AG-G
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       246214  8 -    607251 AC-C---G-----T-AA-A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9114058  8 -  10337057 GC-T---T-----T-AG-G
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35365  8 +    110024 GA-C---T-----T-AG-T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           17286  8 +     18970 GA-C---T-----T-AG-T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925750  8 +  41312741 AG-C---T-----T-CG-G
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582981  8 +  14770903 AT-C---A-----T-AG-G
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045488  8 -   4378816 AC-T---T-----T-AG-G
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379418  8 +  39960074 AC-T---T-----T-AG-G
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415400  8 -    498745 AC-T---T-----T-AG-G
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671686  8 +   7059049 AT-C---T-----T-AG-G
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               266200  8 +  21539334 AC-C---T-----T-AG-G
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74690  8 -    133382 AT-C---G-----T-AA-G
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2412  8 +     25849 AT-C---G-----T-AA-G
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250840  8 - 206538554 AC-C---T-----T-AG-G
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120796  8 - 205367284 AC-C---T-----T-AG-G
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  1438  8 +     25330 AC-C---T-----T-AG-G
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2926293  8 -   3816255 AC-T---T-----T-AG-G
i Fukomys_damarensis.KN121974.1                          I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                5283  8 -     28519 AG-C---T-----T-AG-G
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2472  8 +    660261 AC-C---G-----T-AA-A
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            5291  8 -      6791 GC-C---T-----T-AG-G
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                972  8 -      2763 GC-C---T-----T-AG-G
i Gorilla_beringei.k141_3218903                          C 0 C 0
s Gorilla_gorilla.LT578341.1                                259392  8 - 186649187 GC-C---T-----T-AG-G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    7217  8 -     78134 GC-C---T-----C-AG-G
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34472  8 -    327341 AC-C---T-----T-AG-G
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 16139  8 +     48891 AC-C---G-----T-AA-A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938733  8 -  22651954 AC-T---T-----T-AG-G
i Heterocephalus_glaber.JH602082.1                       I 5 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11525  8 -     36432 AT-C---A-----T-AA-A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                291  8 -      8370 AC-C---T-----T-AA-G
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145857  8 -    630532 GC-C---T-----T-AG-G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  74135  8 +     83186 AC-C---T-----T-AG-G
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75670  8 +    143317 AC-T---T-----T-AG-G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 5 C 0
s Hylobates_agilis.k141_1155965                               8904  8 +     12352 GC-C---T-----T-AG-G
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              16091  8 +     55766 GC-C---T-----T-AG-G
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055619  8 + 191637585 GC-C---T-----T-AG-G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804497  8 +  11177569 GC-C---T-----T-AG-G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11536  8 -    135385 AC-C---T-----T-AT-G
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390787  8 +   7955117 AT-T---T-----T-AG-G
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13591  8 -     16823 AT-C---G-----T-AA-G
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1243275  4 +   9596543 -------------T-AT-G
i Jaculus_jaculus.JH725527.1                             I 3 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75429  8 -     97402 AT-C---G-----T-AA-G
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45715  8 +    110728 AC-C---T-----T-AG-G
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1668  8 -     25587 AT-G---G-----T-AG-G
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                        1160  8 -     23187 AC-C---T-----T-AG-G
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1474  8 -     14280 AC-C---T-----T-AG-G
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                        1114  8 +      3713 AC-C---T-----T-AG-G
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1300  8 +      8855 AC-C---T-----T-AG-G
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         6101  8 -     13645 AC-C---T-----T-AG-G
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        817020  8 -   3914936 AC-C---T-----T-AG-G
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     23286  8 +     24238 AC-T---T-----T-AG-A
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344773  8 +    662738 AT-C---G-----T-AA-G
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               337130  8 -   1826925 AC-C---T-----T-AG-G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                41618424  8 +  59628241 AC-C---T-----T-TG-G
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48527  8 -     61512 AC-C---T-----T-AG-G
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 376189  8 -  60120075 AC-C---T-----T-AG-G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28457  8 +     30207 AC-C---T-----T-AG-G
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3295  8 -      5035 AC-C---T-----T-AG-G
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28410  8 +     30527 AC-C---T-----T-AG-G
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39586  8 -     50087 AC-C---T-----T-AG-G
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49331  8 +     51645 AC-C---T-----T-AG-G
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418533  8 - 187317192 AC-C---T-----T-AG-G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402764  8 +  25927173 AC-C---T-----T-AG-G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51935  8 -     62418 AC-C---T-----T-AG-G
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4466  8 +     14901 AC-C---T-----T-AG-G
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48408  8 +     59329 AC-C---T-----T-AG-G
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274315  8 +    668171 AC-C---T-----T-AG-G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2947  8 -      5049 AC-C---T-----T-AG-G
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 6114  8 +     17132 AC-C---T-----T-AG-G
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226868  8 -    270270 AC-C---T-----T-AG-G
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325597  8 +  24302211 AC-C---T-----T-AG-G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360428  8 -    752769 AC-C---T-----T-AG-G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             677047  8 -    737560 AC-C---T-----T-AG-G
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             224343  8 +    317179 AC-C---T-----T-AG-A
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504987  8 +  40650429 GC-C---T-----T-AG-G
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       154194  8 +    207569 AC-T---T-----T-AG-G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29762  8 -     74585 AC-C---T-----T-AG-G
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53346  8 -    140813 GC-C---T-----T-GG-T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     91056  8 +     93471 AT-T---G-----T-AA-G
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12710  8 +     17804 AC-C---T-----T-AG-G
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                437  8 +      5551 AC-C---T-----T-AG-G
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21521  8 -     26561 AC-C---T-----T-AG-G
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49888  8 +    145209 AC-C---T-----T-AG-G
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188789  8 +    200668 AC-T---G-----T-AG-G
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966773  8 +  27267610 GA-C---T-----T-AG-T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368609  8 -   8254450 AT-C---T-----T-AG-G
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46340  8 -     48117 AT-C---T-----T-AG-G
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25696  8 -     27822 AC-C---T-----T-AG-G
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12253  8 +     27589 AC-C---T-----T-AG-G
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   363165  8 +    437263 AT-C---G-----T-AA-G
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183234  8 +    366855 AC-T---T-----T-AG-G
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32370  8 -     82753 AC-T---G-----T-AA-A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   22222  8 -     63510 AC-C---T-----T-AG-G
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45597  8 +     47283 AT-C---T-----T-AG-G
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35597965  8 + 120012414 gc-c---t-----t-ag-t
i Mus_caroli.LT608237.1                                  C 0 I 235
s Mus_musculus.chr8                                       41691507  8 + 129401213 GC-C---T-----T-AG-T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58219466  8 +  89631738 GC-C---T-----T-AG-T
i Mus_pahari.LT608297.1                                  C 0 I 1
s Mus_spretus.CM004101.1                                  39500426  8 + 130317789 GC-C---T-----T-AG-T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3305  8 -    124358 GC-C---T-----T-AG-G
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358712  8 +  14710649 AC-C---T-----T-CG-G
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1391  8 -     27262 AC-C---T-----T-AA-G
i Myocastor_coypus.MyoCoy_scaffold_57531                 I 2 C 0
s Myotis_brandtii.KE162005.1                               9797602  8 +  10118263 AT-C---T-----T-AG-A
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391776  8 +   6019432 AT-C---T-----T-AG-G
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387815  8 +   4330536 AT-C---T-----T-AG-G
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6602  8 +     18357 AT-C---T-----T-AG-G
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950366 13 +   3037898 AC-T---AAGGTAT-TG-T
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              32481  8 +     34575 AC-C---T-----T-CG-G
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469700  8 -  31847680 AC-C---T-----T-AG-G
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235823  8 -   7148211 AT-C---G-----T-AA-G
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131514  8 -    149072 AC-T---T-----T-AG-G
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56792  8 -    132029 GC-C---T-----T-AG-G
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12887  8 -     16345 GC-C---T-----T-AG-G
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18776  8 +     22201 GC-C---T-----T-AG-G
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8417006  8 -  22158432 GC-C---T-----T-AG-G
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29181  8 -     54323 GC-C---T-----T-AG-G
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                202129  8 +   9404916 AC-C---T-----T-TG-G
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059665  8 -  11899542 AC-T---T-----T-AG-G
i Octodon_degus.JH651603.1                               I 2 C 0
s Odobenus_rosmarus.KB229312.1                             1455469  8 +   2017862 AC-C---T-----T-AG-G
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442766  8 -    630418 AC-C---A-----T-AA-A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22423  8 +    150152 AC-C---G-----T-AA-A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97389  8 -    140218 GA-C---T-----T-AG-T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7932  8 -     41509 GC-C---T-----T-AG-T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8106236  8 +  10937097 TT-T---T-----T-TT-G
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3226  8 +     11607 AC-C---T-----T-AA-G
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107109575  8 - 174332312 AC-T---T-----T-AG-A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        43291  8 +    559221 AC-C---T-----T-TG-G
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26411165  8 -  44047080 AC-C---G-----T-AA-A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11788  8 +     17875 AC-C---G-----T-AA-A
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  751  8 +      1186 GC-C---T-----T-AG-G
i Pan_paniscus.AJFE02001037.1                            I 18 C 0
s Pan_troglodytes.CM009242.2                               1477371  8 - 189151597 GC-C---T-----T-AG-G
i Pan_troglodytes.CM009242.2                             I 43 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   28770  8 -    230217 AC-C---T-----T-AG-G
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18466011  8 -  18783137 AC-C---T-----T-AG-G
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976610  8 +   8748460 AC-C---T-----T-AG-G
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622683  8 +   2937107 AC-C---G-----T-AA-A
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246612  8 - 183742232 AC-C---T-----T-AG-G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12897  8 +     21308 AC-C---T-----T-AG-G
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295640  8 -  20919399 AC-C---T-----T-AG-G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25539  8 -     27687 AC-C---T-----T-AG-G
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2216  8 +     10553 AC-C---T-----T-AG-G
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  2177  8 -     10386 AC-C---T-----T-AG-G
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18890  8 +     78924 AC-C---T-----T-AG-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7867  6 +      9367 ---C---T-----T-GG-A
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         251113  8 +  18517816 GC-C---T-----T-AG-T
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7757  8 -     63832 AT-C---G-----T-AA-G
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5862  8 +     55023 AC-C---T-----T-AG-G
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5385  8 -     89929 AC-C---T-----T-AG-G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5973  8 +     40849 AC-C---T-----T-AG-G
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257702  8 +  14605196 AC-C---T-----T-AG-G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             8092  9 +     22231 AT-C---T-----TAAG-G
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             67227  8 +    207309 AC-C---T-----T-AG-G
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8322  8 -     25401 AC-C---T-----T-AG-G
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               34068  8 +     58159 AC-C---T-----T-AG-G
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34344  8 +     63561 AC-C---T-----T-AG-G
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           34099  8 +     51148 AC-C---T-----T-AG-G
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              559075  8 -   4542175 AC-C---T-----T-AG-G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           34083  8 +     51125 AC-C---T-----T-AG-G
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            5005  8 +     19503 AT-C---G-----T-AA-G
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10515  8 +     39866 AC-C---T-----T-AG-G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5597  8 -      9282 AC-C---T-----T-AG-G
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       45001  8 -     87950 AC-C---T-----T-AG-G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45395  8 -     88961 AC-C---T-----T-AG-G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10093  8 -     39403 AC-C---T-----T-AG-G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          45045  8 +     87928 AC-C---T-----T-AG-G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         10092  8 -     60166 AC-C---T-----T-AG-G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      17013  8 -     67232 AC-C---T-----T-AG-G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44945  8 -     90634 AC-C---T-----T-AG-G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46412  8 +     89403 AC-C---T-----T-AG-G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182552  8 - 189387572 GC-C---T-----T-AG-G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197294  8 -   9816681 GC-C---T-----T-AG-G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              31060  8 +     69807 AC-C---T-----T-AG-G
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48243  8 -     80239 AC-C---T-----T-AG-G
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Psammomys_obesus.NESX01036366.1                            40879  8 +     52041 GC-C---T-----C-GG-T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55873  8 -     66298 AC-T---T-----T-AG-G
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8247  8 -     18639 AG-C---T-----T-CG-G
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844443  8 -  28871421 TC-C---T-----T-AG-G
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540959  8 -   4952924 TC-C---T-----A-AG-G
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18103003  8 +  38429054 AC-C---T-----T-AG-G
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             30429  8 +     91421 AC-C---T-----T-AG-G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156980  8 -   7812017 AC-C---T-----T-AG-G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11280  8 +     72585 AC-C---T-----T-AG-G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5284  8 -     55207 AC-C---G-----T-AA-A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37026080  8 -  90668790 GC-C---T-----T-AG-T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918342  8 +   3329780 AC-C---T-----T-AG-G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4886  8 +      7119 AC-C---T-----T-AG-G
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125556  8 + 195417433 AC-C---T-----T-AG-G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239728  8 -   7961872 AC-C---T-----T-AG-G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79189  8 -    116970 AC-C---T-----T-AG-G
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9787  7 +     12412 AC-C---T-----T--G-G
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                              1109  7 +      9876 AC-C---T-----T--G-G
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16705  7 -     24931 AC-C---T-----T--G-G
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1584  7 +      4564 AC-C---T-----T--G-G
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4389  7 -      7443 AC-C---T-----T--G-G
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395422  7 - 209938924 AC-C---T-----T--G-G
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                2006  7 +     10149 AC-C---T-----T--G-G
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1350  7 +     10417 AC-C---T-----T--G-G
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14735  8 +     16473 AC-C---G-----T-AA-A
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111474  8 + 121099817 AC-C---T-----T-AG-G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       33043  8 -     47369 AC-C---T-----T-AG-G
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33426  8 -     79414 AC-C---T-----T-AG-G
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              30117  8 -     34454 AC-C---T-----T-AG-G
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17519  8 -     22428 AC-C---T-----T-AG-G
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32673  8 -     47109 AC-C---T-----T-AG-G
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240697  8 +   5703754 AC-C---T-----T-AG-G
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10288  8 +     21866 AC-C---T-----T-AG-G
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122780  8 +    313613 GT-G---T-----T-AG-A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1860  8 +     11297 AC-C---T-----T-AG-G
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32253  8 +     58920 AC-C---T-----T-AG-G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18751  8 -     45317 AC-C---T-----T-AG-G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26409  8 -     42441 AC-C---T-----T-AG-G
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1669243                      4050  8 -      6251 AC-C---T-----T-AG-G
i Semnopithecus_schistaceus.k141_1669243                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          32173  8 -     48123 AC-C---T-----T-AG-G
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52934  8 +     77746 GC-T---T-----T-AG-T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867540  8 -   1910179 TT-C---T-----T-AG-A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674760  8 +  18376816 AT-C---T-----A-AG-G
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1872350  8 +   3870691 AC-C---T-----T-AG-G
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16464  8 -     97271 AC-C---T-----T-CG-G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             129098  8 +    196729 AC-C---T-----T-AG-G
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6648376  8 +  69701581 AC-C---A-----T-AA-G
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       394263  8 +   1523678 GC-C---T-----T-AG-G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17791  7 +     22964 -C-C---T-----T-AG-G
i Tadarida_brasiliensis.TadBra_scaffold_54991            I 4 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      195209  8 +    199430 AC-T---T-----T-AG-G
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    109189  8 -    539355 AC-T---T-----T-AG-G
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4802  8 +      9917 AC-C---T-----T-AG-G
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11598  8 +     20590 AC-C---T-----T-AG-G
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356423  8 - 186847797 AC-C---T-----T-AG-G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              28030  6 -     33621 ---T---T-----T-AA-G
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22767  8 -     31044 AC-T---T-----T-AG-A
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    484119  8 -    610378 AC-T---G-----T-AG-G
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        24162  8 +     26378 AC-C---T-----T-AG-G
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36960  8 -     78344 AC-C---T-----T-AG-G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23487  8 +     25722 AC-C---T-----T-AG-G
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31916  8 -     62838 AC-C---T-----T-AG-G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31907  8 +     46913 AC-C---T-----T-AG-G
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12645  8 -     28527 AC-C---T-----T-AG-G
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33847  8 -     64340 AC-C---T-----T-AG-G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31885  8 -     63452 AC-C---T-----T-AG-G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13336  8 +     22490 AC-C---T-----T-AG-G
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1302  8 +      9911 AC-C---T-----T-AG-G
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                         1097  8 -     33539 AC-C---T-----T-AG-G
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258856  8 -   6242583 AC-C---T-----T-AG-G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4875  8 +     19340 AC-C---T-----T-AG-G
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177978  8 -    200418 AC-T---G-----T-AA-G
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1840036  8 -   4065304 AC-C---T-----T-AG-G
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      14111  8 -     70247 AC-C---T-----T-AG-G
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369360  8 -  33153633 AT-C---G-----T-AA-G
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7547  8 -     21056 GC-G---T-----T-AG-A
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185672  8 +   5085361 AC-T---C-----T-AG-G
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   80493  8 +   5488506 AC-T---G-----T-AA-G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                109023  8 -    112863 AC-C---T-----T-TG-G
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        178218  8 -    224448 AT-C---T-----T-AG-G
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32675  8 -     86975 AC-C---T-----T-AG-G
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       4955  4 -     63895 -------------T-AG-G
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 233 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1321  8 +      3447 AT-T---G-----T-AA-G
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_510450               2585  0 -      4087 C
e Petromus_typicus.PetTyp_scaffold_17301                     35717  0 -     56120 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I
e Trichechus_manatus.JH594705.1                            6485793  0 -  10818551 C
e Procavia_capensis.ProCapCap_scaffold_128773                 2986  0 -     12774 C
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Loxodonta_africana.GL010049.1                           39088195  0 +  43346337 C
e Heterohyrax_brucei.HetBruBak_scaffold_116546                6454  0 +      8654 C

a score=0.000000
s hg38.chrUn_KI270755v1                                      10227 6 +     36723 CCTTCC
s Acinonyx_jubatus.LLWD01001279.1                           816770 6 +   1699592 CTTTCC
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     28958 3 +     63021 AT---T
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419226 6 +  29979442 CTTCCT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            219225 6 +    347723 CTTCCT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    21731 6 -     61208 TTTCTT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   51177 6 +     53615 CCTTCC
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3205 6 +     13857 CCTTCC
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19761 6 -     21945 CCTTCC
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21446 6 +     32033 CCTTCC
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74701 6 -     84148 CCTTCC
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46955 6 -     78289 CCTTCC
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46371 6 +     55831 CCTTCC
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44833 6 -     64179 CCTTCC
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1936 6 -      3959 CCTTCC
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43458 6 +     45454 CCTTCC
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              49107 6 +     70886 CCTTCC
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11277 6 +     30854 CCTTCC
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35413 6 +     42133 CCTTCC
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592432 6 +   2318259 CTTCCC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180836 6 -    412891 CTTCCT
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53588 6 -     68529 CTTCTC
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3618 6 +     17741 CCTTCC
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4243 6 -     15923 CCTTCC
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674525 6 +   5030052 CCTTCC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4519 6 -     16391 CCTTCC
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               4078 6 -     17186 CCTTCC
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27685 6 -     32367 CTTCCT
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9346 1 -     15198 -----T
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               277176 6 +  21539123 ACTTCC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13341 6 +     48076 CCTTCC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8477 6 -     28759 CCTTCC
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              36033 6 +     44353 ACTTCC
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51403 6 -     71267 CCTTCC
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25461 6 -     33135 CCTTCC
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7967083 6 -  23207421 CTTCCT
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3584 6 -     25979 CTTACT
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93419 6 +    124022 TTTCCC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36608 6 +    288883 CTTCCC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423761 6 -  48749331 CTTCCC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      769362 6 +   1948126 CTTCCC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559907 6 -  45695690 CTTCCC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536588 6 -   4408762 CTTCCC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                  10255 6 +     28062 CCTTCC
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45546 6 -     91139 CCTTCC
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  23073 6 +     95584 CCTTCC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22986 6 +    119600 CCTTCC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12609 6 +     18648 CCTTCC
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             12112 6 -     13885 CCTTCC
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            4323 6 -      8861 CCTTCC
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456665 6 + 189096842 CCTTCC
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               4239 6 +      8664 CCTTCC
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7635127 6 +  17673402 CTTCCT
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4669428 6 +   7040546 CTTCCT
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1213126 6 +   1652518 CTTCCT
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42509164 6 +  60362399 CTTCCC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12799 6 -     23171 CTTCCC
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          226140 6 +   9314153 CTTCCC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41619277 6 +  59632846 CTTCCC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110858 6 -  63665305 CTTCCC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416436 6 -  46296322 CTTCCC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598433 6 +  44709034 CTTCCC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2342 6 -     20114 GTTTCC
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274619 6 +    496798 CTTCTT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               4225 6 +      9923 CTTCCT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31717 6 -     39886 CTTCCT
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83436 6 -    217609 CTTCCT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              5000308 6 +  23392119 NNNNNN
i Cavia_aperea.AVPZ01000300.1                            C 0 I 37
s Cavia_porcellus.DS562891.1                               5003749 6 +  23407841 CTTCCC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          634 6 -    143979 CTTCCC
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_niveiventris.k141_592277                           7580 6 -     12580 CCTTCC
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45689 6 +     53515 CCTTCC
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376315 6 -  26074798 CCTTCC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10384 6 -     34880 CCTTCC
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69482 6 -     89041 CCTTCC
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2282 6 -     76265 CTTCTT
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495758 6 -  27778364 CTTCCT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22591 6 +     27315 CTTCCT
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                144261 6 -   4669795 CCTTCC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                          235 6 +      3297 CCTTCC
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3433 6 -     14410 CCTTCC
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47815 6 -    148725 CCTTCC
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        30092 6 -     40656 CCTTCC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                          10051 6 +     20796 CCTTCC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            15165 6 -     17524 CCTTCC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30898 6 -     34525 CCTTCC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14676 6 -     25376 CCTTCC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367265 6 -  39242232 CCTTCC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272990 6 +  21565898 CCTTCC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35357 6 -     45857 CCTTCC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30258 6 -     32606 CCTTCC
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6413 6 +      8499 CCTTCC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28818 6 +     70610 CCTTCC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25780 6 +     36323 CCTTCC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15666 6 -     19938 CTTCTC
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            11349 6 -     32913 CCTTCC
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21762 6 -     40346 CCTTCC
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             22016 6 +    216457 CCTTCC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21806 6 +     39636 CCTTCC
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33897 6 -     52013 CCTTCC
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44886 6 -    112038 CCTTTC
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10436 6 +     34062 CCTTTC
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346680 6 +  18827391 CCTTCC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13219 6 -     44032 CCTTCC
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            308066 6 - 135778131 CCTTCC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2358 6 +     10270 CTTCCT
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            609835 6 -    839153 CTTCCT
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2585 4 -      4087 --ACTG
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412474 6 -   2368649 CCTTCC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382356 6 - 200372422 CCTTCC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5909 6 -     84244 CCTTCC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810937 6 +  53390261 CTTCCA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6506 6 -      8242 ATTCTT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47651 3 -     83289 CT---T
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213119171 3 - 224834208 CG---T
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_205242                92 6 +      5812 CTTCCT
i Crocidura_indochinensis.CroInd_scaffold_205242         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              8108 6 +     87169 CTTCCC
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650389 4 -   1526836 --TCTT
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  23013 6 +     50838 GTTCCC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12501 6 +     36344 CTTCTC
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            31942 6 +     75252 CTTCTC
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2113409 6 -   2246927 CTTCCT
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635495 6 -  35494412 CTTCCT
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11869218 6 -  20541912 CTTCCT
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668029 6 -   1390856 CTTCCT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  142834 6 -    198055 CTTCCT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955757 6 -  37912305 CTTTCT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                   1361 6 +     14058 CTTTCT
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_341948                  107 6 -      1676 CTTCCC
i Dolichotis_patagonum.DolPat_scaffold_341948            C 0 C 0
s Echinops_telfairi.JH980293.1                            62858715 6 - 111700974 CTTTCG
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9903 6 +     19438 CTTCCT
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       246222 6 -    607251 CTTCCC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9114066 6 -  10337057 CTTCTG
i Elephantulus_edwardii.JH947257.1                       C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35373 3 +    110024 CT---T
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           17294 3 +     18970 CT---T
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925758 6 +  41312741 CTTCCT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582989 6 +  14770903 CTTTCT
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045496 6 -   4378816 CTTCCT
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379426 6 +  39960074 CTTCCT
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415408 6 -    498745 CTTCCT
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671694 6 +   7059049 TTTCCT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               266208 6 +  21539334 CCTTCC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74698 6 -    133382 CTTCCT
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2420 6 +     25849 CTTCCT
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250848 6 - 206538554 CTTTCC
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120804 6 - 205367284 CTTTCC
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  1446 6 +     25330 CTTTCC
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2926301 6 -   3816255 ATTCCC
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                5291 6 -     28519 CCTCCT
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2480 6 +    660261 CTTCCC
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            5299 6 -      6791 CTTTCT
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                                980 6 -      2763 CCTTCC
i Gorilla_beringei.k141_3218903                          C 0 I 92
s Gorilla_gorilla.LT578341.1                                259400 6 - 186649187 CCTTCC
i Gorilla_gorilla.LT578341.1                             C 0 I 92
s Graphiurus_murinus.GraMur_scaffold_10447                    7225 6 -     78134 CTTCCT
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34480 6 -    327341 CTTCCC
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 16147 6 +     48891 CTTCCC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938741 6 -  22651954 ATTCCT
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11533 6 -     36432 CTTCCT
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                299 6 -      8370 ATTCCT
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145865 6 -    630532 CCTTCC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  74143 6 +     83186 CTTCCC
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75678 6 +    143317 CTTCCC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               8912 6 +     12352 CCTTCC
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              16099 6 +     55766 CCTTCC
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055627 6 + 191637585 CCTTCC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804505 6 +  11177569 CCTTCC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11544 6 -    135385 CTTCCC
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390795 6 +   7955117 CTTCCC
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13599 6 -     16823 CTTCCT
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1243279 6 +   9596543 TTTCTT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75437 6 -     97402 CTTCCT
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45723 6 +    110728 CCTTCC
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1676 6 -     25587 CTTTCT
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 C 0
s Leontocebus_fuscicollis.k141_3470480                        1168 6 -     23187 CCTTCC
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1482 6 -     14280 CCTTCC
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                        1122 6 +      3713 CCTTCC
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1308 6 +      8855 CCTTCC
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         6109 6 -     13645 CCTTCC
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        817028 6 -   3914936 CTTCCT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     23294 5 +     24238 CTG-TG
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344781 6 +    662738 CTTCCT
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               337138 6 -   1826925 CCTTCC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Lycaon_pictus.CM007581.1                                41618432 6 +  59628241 CTTCCC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48535 6 -     61512 CCTTCC
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 376197 6 -  60120075 CCTTCC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28465 6 +     30207 CCTTCC
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3303 6 -      5035 CCTTCC
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28418 6 +     30527 CCTTCC
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39594 6 -     50087 CCTTCC
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49339 6 +     51645 CCTTCC
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418541 6 - 187317192 CCTTCC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402772 6 +  25927173 CCTTCC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51943 6 -     62418 CCTTCC
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4474 6 +     14901 CCTTCC
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48416 6 +     59329 CCTTCC
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274323 6 +    668171 CCTTCC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2955 6 -      5049 CCTTCC
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 6122 6 +     17132 CCTTCC
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226876 6 -    270270 CTTCCT
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325605 6 +  24302211 CCTTCC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360436 6 -    752769 CCTTCC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             677055 6 -    737560 CTTCCT
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             224351 6 +    317179 CTTCCT
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7504995 6 +  40650429 CTTCCC
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       154202 6 +    207569 ATTCCC
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29770 6 -     74585 CTTCCT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53354 3 -    140813 AT---T
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     91064 6 +     93471 CTTCCT
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12718 6 +     17804 CCTTCC
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                445 6 +      5551 CCTTCC
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21529 6 -     26561 CCTTCC
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49896 6 +    145209 CTTCCG
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188797 6 +    200668 CTTCCT
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966781 3 +  27267610 CT---T
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368617 6 -   8254450 CTTCTT
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46348 6 -     48117 CTTCTT
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25704 6 -     27822 CCTTCC
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12261 6 +     27589 CTTCCT
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   363173 6 +    437263 CTTCCT
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183242 6 +    366855 CTTCCT
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32378 6 -     82753 CTTCCC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   22230 6 -     63510 CTTCCC
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45605 6 +     47283 CTTTCT
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35598208 3 + 120012414 CT---T
i Mus_caroli.LT608237.1                                  I 235 C 0
s Mus_musculus.chr8                                       41691515 3 + 129401213 CT---T
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58219475 3 +  89631738 CT---T
i Mus_pahari.LT608297.1                                  I 1 C 0
s Mus_spretus.CM004101.1                                  39500434 3 + 130317789 CT---T
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3313 6 -    124358 CTTGGT
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358720 6 +  14710649 CTTCCT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1399 6 -     27262 GTTCCC
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797610 6 +  10118263 CTTTCT
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391784 6 +   6019432 CTTTCT
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387823 6 +   4330536 CTTTCT
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6610 6 +     18357 CTTTCT
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950379 6 +   3037898 CTTCCT
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              32489 6 +     34575 CCTTCC
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469708 6 -  31847680 CTTCCT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235831 6 -   7148211 CTTCCT
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131522 6 -    149072 CTTCCT
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56800 6 -    132029 CCTTCC
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12895 6 -     16345 CCTTCC
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18784 6 +     22201 CCTTCC
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8417014 6 -  22158432 CCTTCC
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29189 6 -     54323 CCTTCC
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                202137 6 +   9404916 CTTCCC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059673 6 -  11899542 CTTCCC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1455477 6 +   2017862 CTTCCT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442774 6 -    630418 CTTCCC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22431 6 +    150152 CTTCCC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97397 3 -    140218 CT---T
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    7940 3 -     41509 CT---T
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8106244 6 +  10937097 CTTCCT
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3234 6 +     11607 CTCCTG
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107109583 5 - 174332312 CTG-TG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        43299 6 +    559221 CTTCCC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26411173 6 -  44047080 CTTCCC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11796 6 +     17875 CTTCCC
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  759 6 +      1186 CCTTCC
i Pan_paniscus.AJFE02001037.1                            C 0 I 92
s Pan_troglodytes.CM009242.2                               1477379 6 - 189151597 CCTTCC
i Pan_troglodytes.CM009242.2                             C 0 I 133
s Panthera_onca.PanOnc_flattened_line_3271                   28778 6 -    230217 CTTTCC
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18466019 6 -  18783137 CTTTCC
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976618 6 +   8748460 CTTTCC
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622691 6 +   2937107 CTTCCC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246620 6 - 183742232 CCTTCC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12905 6 +     21308 CCTTCC
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295648 6 -  20919399 CCTTCC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25547 6 -     27687 CCTTCC
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2224 6 +     10553 CCTTCC
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  2185 6 -     10386 CCTTCC
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18898 6 +     78924 TTTTCC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7873 6 +      9367 CTTTAT
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 I 2
s Peromyscus_maniculatus.KI615324.1                         251121 3 +  18517816 CT---T
i Peromyscus_maniculatus.KI615324.1                      C 0 I 29
s Phocoena_phocoena.PhoPho_flattened_line_24159               7765 6 -     63832 CTTCCT
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5870 6 +     55023 CCTTCC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5393 6 -     89929 CCTTCC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5981 6 +     40849 CCTTCC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257710 6 +  14605196 CCTTCC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             8101 6 +     22231 CTTTCT
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             67235 6 +    207309 CCTTCC
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8330 6 -     25401 CCTTCC
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               34076 6 +     58159 CCTTCC
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34352 6 +     63561 CCTTCC
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           34107 6 +     51148 CCTTCC
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              559083 6 -   4542175 CCTTCC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           34091 6 +     51125 CCTTCC
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            5013 6 +     19503 CTTCCT
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10523 6 +     39866 CCTTCC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5605 6 -      9282 CCTTCC
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       45009 6 -     87950 CCTTCC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45403 6 -     88961 CCTTCC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10101 6 -     39403 CCTTCC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          45053 6 +     87928 CCTTCC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         10100 6 -     60166 CCTTCC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      17021 6 -     67232 CCTTCC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44953 6 -     90634 CCTTCC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46420 6 +     89403 CCTTCC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182560 6 - 189387572 CCTTCC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197302 6 -   9816681 CCTTCC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              31068 6 +     69807 CCTTCC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48251 6 -     80239 CCTTCC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Psammomys_obesus.NESX01036366.1                            40887 3 +     52041 AT---T
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55881 6 -     66298 CTTCCT
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8255 6 -     18639 CTTCCT
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844451 6 -  28871421 CTTCCT
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540967 6 -   4952924 CTTCCT
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18103011 6 +  38429054 CTTTCC
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             30437 6 +     91421 CCTTCC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156988 6 -   7812017 CCTTCC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11288 6 +     72585 CCTTCC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5292 6 -     55207 CTTCCC
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37026088 3 -  90668790 CT---T
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918350 6 +   3329780 ATTCCT
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4894 6 +      7119 CCTTCC
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125564 6 + 195417433 CCTTCC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239736 6 -   7961872 CCTTCC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79197 6 -    116970 CTTCCT
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9794 6 +     12412 CCTTCC
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                              1116 6 +      9876 CCTTCC
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16712 6 -     24931 CCTTCC
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1591 6 +      4564 CCTTCC
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4396 6 -      7443 CCTTCC
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395429 6 - 209938924 CCTTCC
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                2013 6 +     10149 CCTTCC
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1357 6 +     10417 CCTTCC
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14743 6 +     16473 CTTCCC
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111482 6 + 121099817 CCTTCC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       33051 6 -     47369 CCTTCC
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33434 6 -     79414 CCTTCC
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              30125 6 -     34454 CCTTCC
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17527 6 -     22428 CCTTCC
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32681 6 -     47109 CCTTCC
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240705 6 +   5703754 CCTTCC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10296 6 +     21866 CCTTCC
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122788 6 +    313613 CTTCCT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1868 6 +     11297 CCTTCC
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32261 6 +     58920 CCTTCC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18759 6 -     45317 CCTTCC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26417 6 -     42441 CCTTCC
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1669243                      4058 6 -      6251 CCTTCC
i Semnopithecus_schistaceus.k141_1669243                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          32181 6 -     48123 CCTTCC
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52942 3 +     77746 CT---T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867548 6 -   1910179 CTTTCT
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674768 6 +  18376816 CTTCCT
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1872358 6 +   3870691 CTTCCC
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             16472 6 -     97271 CTTCCT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 467
s Suricata_suricatta.SurSur_flattened_line_6629             129106 6 +    196729 CTTCCC
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6648384 6 +  69701581 CTTCCT
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       394271 6 +   1523678 CCTTCC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17798 6 +     22964 CTTCCT
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      195217 6 +    199430 CTTCCC
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    109197 6 -    539355 CTTCCC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4810 6 +      9917 TTTCTT
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11606 6 +     20590 TTTCTT
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356431 6 - 186847797 CCTTCC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              28036 6 -     33621 ATTCCC
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22775 6 -     31044 CTTCTT
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    484127 6 -    610378 CTTCCT
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        24170 6 +     26378 CCTTCC
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36968 6 -     78344 CCTTCC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23495 6 +     25722 CCTTCC
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31924 6 -     62838 CCTTCC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31915 6 +     46913 CCTTCC
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12653 6 -     28527 CCTTCC
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33855 6 -     64340 CCTTCC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31893 6 -     63452 CCTTCC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13344 6 +     22490 CCTTCC
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1310 6 +      9911 CCTTCC
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                         1105 6 -     33539 CCTTCC
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258864 6 -   6242583 CCTTCC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4883 6 +     19340 CCTTCC
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177986 6 -    200418 CTTCCT
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tupaia_chinensis.KB320699.1                              1840044 6 -   4065304 CTTCCC
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      14119 6 -     70247 CTTCCC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369368 6 -  33153633 CTTCCT
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7555 6 -     21056 CTTCTT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185680 6 +   5085361 CTTCCT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   80501 6 +   5488506 CTTCCT
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                109031 6 -    112863 CTTCCC
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        178226 6 -    224448 CTTCCC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32683 6 -     86975 CTTCCT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       4959 6 -     63895 TTTCTT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1329 6 +      3447 CTTCCT
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Petromus_typicus.PetTyp_scaffold_17301                     35717 0 -     56120 C
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548 0 -     32986 I
e Trichechus_manatus.JH594705.1                            6485793 0 -  10818551 C
e Procavia_capensis.ProCapCap_scaffold_128773                 2986 0 -     12774 C
e Mesocricetus_auratus.KB708134.1                         17432714 804 +  29670104 I
e Loxodonta_africana.GL010049.1                           39088195 0 +  43346337 C
e Heterohyrax_brucei.HetBruBak_scaffold_116546                6454 0 +      8654 C

a score=0.000000
s hg38.chrUn_KI270755v1                                      10233 53 +     36723 AAGGA----CA---------------CAAA-ATTTTCATTCTT----A-------T-A-AAA-AGCAT--TT-GGCTAG-----GAA--------TCA-G-A----------------------------AG-A
s Acinonyx_jubatus.LLWD01001279.1                           816776 57 +   1699592 AAGAA----CA---------------TAAA-ATTATCAGTCTt-acag-------t-agaaa-agcat--tt-ggctca-----gaa--------tca-g-a----------------------------aa-a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     28961 57 +     63021 GAGAT----CA---------------TAGA-ATGACCACTCTC-Acag-------t-acagaaagcat--tt-ggctag-----a-a--------tca-g-a----------------------------aa-a
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419232 57 +  29979442 GAGAA----CA---------------CAAA-ATTATCAGTCTT-ACAG-------T-ggaaa-agcat--tt-ggctta-----gaa--------tca-g-a----------------------------aa-a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            219231 65 +    347723 GAGAA----CA---------------CAAA-ATTATTtgtctt-acag-------t-ggaaa-agcat--tt-ggctta-----gaaatttggcttca-g-a----------------------------aa-a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    21737 56 -     61208 GAGGA----CG---------------CAAA-ATTATCACTCTC-ATAG-------T-ACAGA-CACAT--TT-GGCTAG-----G-A--------TCA-G-A----------------------------AA-A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3755588                   51183 56 +     53615 AAGGA----CA---------------CGAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3211 56 +     13857 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-gaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19767 56 -     21945 AAGGA----CA---------------CAAA-ATTTTTATTCTT-ATAA-------T-a-gaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21452 56 +     32033 AAGGA----CA---------------CAAA-ATTTTTATTCTT-ATAA-------T-a-gaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74707 56 -     84148 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               46961 56 -     78289 GATGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46377 56 +     55831 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44839 56 -     64179 GAGGA----TA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1942 56 -      3959 GAGGA----TA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43464 56 +     45454 GAGGA----TA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              49113 56 +     70886 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11283 56 +     30854 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35419 56 +     42133 GAGGA----TA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592438 57 +   2318259 AAAGA----CA---------------CAA-AATTATCACTCTt-acga-------t-agaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180842 57 -    412891 GAGAA----CC---------------CATA-ATTATTACTCTt-acag-------t-ggaga-aacat--tt-ggctag-----gaa--------tca-g-a----------------------------aa-a
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53594 55 -     68529 AAAGA----CA---------------CAAA-ATTATCAC--TT-ACag-------c-agaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3624 56 +     17741 AAGGA----CA---------------CGAA-ATTGTCATGCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AA-A
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4249 56 -     15923 AAGGA----CA---------------CGAA-ATTGTCATGCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AA-A
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674531 56 +   5030052 AAGGA----CA---------------CGAA-ATTGTCATGCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AA-A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4525 56 -     16391 AAGGA----CA---------------CGAA-ATTGTCATGCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AA-A
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               4084 56 -     17186 AAGGA----CA---------------CGAA-ATTGTCATGCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AA-A
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27691 55 -     32367 TAGGA----C-----------------AGA-ATTGTCACTCTT-TTAG-------T-ACAAA-AGCGT--TC-AGTGAG-----GAT--------ACA-G-C----------------------------AA-A
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9347 57 -     15198 GAGAA----CC---------------CATG-ATTATTACTCTC-Acag-------g-ggaga-aacgt--tt-ggctcc-----gaa--------tca-g-a----------------------------ac-a
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               277182 56 +  21539123 GAGGA----CA---------------CAAA-ATTGTCATTCTC-ATAA-------T-A-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13347 56 +     48076 GAGGA----CA---------------CAAA-ATTGTCATTCTC-ATAA-------T-G-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8483 56 -     28759 GAGGA----CA---------------CAAA-ATTGTCATTCTC-GTAA-------T-A-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              36039 56 +     44353 GAGGA----CA---------------CAAA-ATTGTCATTCTC-ATAA-------T-A-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51409 56 -     71267 GAGGA----CA---------------CAAA-ATTGTCATTCTC-GTAA-------T-A-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25467 56 -     33135 GAGGA----CA---------------CAAA-ATTGTCATTCTC-ATAA-------T-G-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7967089 57 -  23207421 GAAGA----CA---------------CAAA-ATTACCACTCTt-acag-------t-ggaaa-aacat--tt-ggctag-----gaa--------cca-c-a----------------------------aa-g
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3590 57 -     25979 GAAGA----CA---------------CAAA-ATTACCACTCTt-acag-------t-ggaaa-aacat--tt-ggctag-----gaa--------cca-c-a----------------------------aa-g
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93425 57 +    124022 AAAAA----CA---------------CAAA-ATTATCACTCTt-acaa-------t-agaaa-aacat--tt-ggctag-----aaa--------tca-c-g----------------------------aa-a
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36614 57 +    288883 AAAGA----CA---------------CAAA-ATTATCACTCTt-acag-------t-ataaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423767 57 -  48749331 AAAGA----CA---------------CAAA-ATTATCACTCTt-anag-------t-ataaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      769368 57 +   1948126 AAAGA----CA---------------CAAA-ATTATCACTCTt-acag-------t-ataaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559913 57 -  45695690 AAAGA----CA---------------CAAA-ATTATCACTCTt-acag-------t-ataaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536594 57 -   4408762 AAAGA----CA---------------CAAA-ATTATCACTCTT-ACag-------t-agaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                  10261 56 +     28062 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45552 56 -     91139 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  23079 56 +     95584 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         22992 56 +    119600 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-a-aaa-agcat--tt-gggcag-----gaa--------tca-g-a----------------------------ag-a
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12615 55 +     18648 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-T-AAA-AGCAC--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             12118 55 -     13885 GAGGA----CA---------------CGAA--TTGTCATTCTT-ATAG-------T-A-AAA-AGCAC--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            4329 55 -      8861 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-T-AAA-AGCAC--CT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456671 55 + 189096842 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-T-AAA-AGCAC--CT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               4245 55 +      8664 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-T-AAA-AGCAC--CT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7635133 57 +  17673402 GAAGA----CA---------------CAGA-ATTATCATTCTt-atag-------t-ggaaa-aacat--tt-ggctaa-----gaa--------tca-t-a----------------------------aa-a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4669434 57 +   7040546 GAAGA----CA---------------CAGA-ATTATCATTCTt-atag-------t-ggaaa-aacat--tt-ggctaa-----gaa--------tca-t-a----------------------------aa-a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1213132 57 +   1652518 GAAGA----CA---------------CAGA-ATTATCATTCTt-atag-------t-ggaaa-aacat--tt-ggctaa-----gaa--------tca-t-a----------------------------aa-a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42509170 58 +  60362399 AAGAA----CA---------------CAAA-ATTATTAGTCTT-ACag-------t-agaaa-agcat--tt-ggaata-----gaa--------tcagg-a----------------------------aa-a
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12805 58 -     23171 AAGAA----CA---------------CAAA-ATTATTAGTCTT-ACag-------t-agaaa-agcat--tt-ggaata-----gaa--------tcagg-a----------------------------aa-a
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          226146 58 +   9314153 AAGAA----CA---------------CAAA-ATTATTAGTCTt-acag-------t-agaaa-agcat--tt-ggaata-----gaa--------tcagg-a----------------------------aa-a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41619283 58 +  59632846 AAGAA----CA---------------CAAA-ATTATTAGTCTt-acag-------t-agaaa-agcat--tt-ggaata-----gaa--------tcagg-a----------------------------aa-a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110864 58 -  63665305 AAGAA----CA---------------CAAA-ATTATTAGTCTt-acag-------t-agaaa-agcat--tt-ggaata-----gaa--------tcagg-a----------------------------aa-a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416442 57 -  46296322 AAAGA----CA---------------CAA-AATTACCACTCTt-acaa-------t-agaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598439 57 +  44709034 AAAGA----CA---------------CAA-AATTACCACTCTt-acaa-------t-agaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2348 50 -     20114 AAAGA----C-----------------AAA-ATTATCACTGTT-ATAG-------C-ACAGA-aacat--tt-ggccag-----gaa--------tca------------------------------------
i Capromys_pilorides.CapPil_scaffold_26391               C 0 I 12
s Carlito_syrichta.NW_007259797.1                           274625 57 +    496798 AAGGA----CA---------------CAAA-ACTATCACTTTT-ACTG-------T-ACAAA-AGCAT--TT-GGCTAA-----GGC--------TTA-G-A----------------------------AT-A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               4231 57 +      9923 GAGAA----CC---------------CATA-GTTATGACTCTC-Acag-------t-ggaga-aacat--tt-ggctag-----gaa--------tca-g-a----------------------------aa-a
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31723 57 -     39886 GGGGT----CA---------------CAAA-ATTGTCACGCTt-acag-------t-acaaa-agcat--tt-gtctaa-----gaa--------tca-g-a----------------------------aa-a
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83442 57 -    217609 GAAGA----CA---------------CAAA-ATTGCCACTCTT-Tcag-------t-ggaaa-aacat--tc-ggctag-----gaa--------tca-t-a----------------------------aa-a
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                              5000351  2 +  23392119 -----------------------------------------------------------------------------------------------NN-------------------------------------
i Cavia_aperea.AVPZ01000300.1                            I 37 N 0
s Cavia_porcellus.DS562891.1                               5003755 37 +  23407841 CAAGC----CA---------------CAAA-ATTATCACTCTT-ATAA-------T-ACAAA-----T--TT-A------------------------------------------------------------
i Cavia_porcellus.DS562891.1                             C 0 I 17
s Cavia_tschudii.CavTsc_scaffold_8919                          640 37 -    143979 CAAGC----CA---------------CAAA-ATTATCACTCTT-ATAA-------T-ACAAA-----T--TT-A------------------------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 17
s Cebuella_niveiventris.k141_592277                           7586 55 -     12580 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-T-AAA-AGCAC--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45695 55 +     53515 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-T-AAA-AGCAC--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376321 56 -  26074798 AAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10390 56 -     34880 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69488 56 -     89041 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-a-aaa-agcat--tt-gggcag-----gaa--------tca-g-a----------------------------ag-a
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2288 57 -     76265 AAAGA----CA---------------CAAA-ACTATCACTTTT-ACTG-------T-ACAaa-agcat--tt-ggctaa-----ggc--------tta-g-a----------------------------at-a
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15495764 57 -  27778364 GAGGA----CA---------------CAAA-ATGATCACTCTT-ACAG-------T-GGAAA-AGCAT--TT-GGCTAG-----GAA--------GCA-G-A----------------------------Aa-a
i Ceratotherium_simum.JH767749.1                         C 0 I 225
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22597 57 +     27315 GAGGA----CA---------------CAAA-ATGATCACTCTT-ACAG-------T-GGAAA-AGCAT--TT-GGCTAG-----GAA--------GCA-G-A----------------------------AA-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 I 223
s Cercocebus_atys.KQ010504.1                                144267 56 -   4669795 CAGGA----CA---------------CAAC-ATTTTCATTCTG-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                          241 56 +      3297 CAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3439 56 -     14410 CAGGA----CA---------------CAAC-ATTTTCATTCTG-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47821 56 -    148725 CAGGA----CA---------------CAAA-ATTTTCATTCTG-ATAA-------T-A-Aaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        30098 56 -     40656 AAGGA----CA---------------CAAA-ATATTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                          10057 56 +     20796 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            15171 56 -     17524 AAGGA----CA---------------CAAC-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30904 56 -     34525 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14682 56 -     25376 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367271 56 -  39242232 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  272996 56 +  21565898 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-Aaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35363 56 -     45857 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-Aaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30264 56 -     32606 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6419 56 +      8499 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28824 56 +     70610 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-Aaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25786 56 +     36323 AAGGA----CA---------------CAAC-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15672 49 -     19938 GAGGA----CA---------------CAAA-GTTG---GTCTT-Agag-------t-ggaaa-agcat--ta-ggttag-----gaa--------tca------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 I 2
s Cheracebus_lucifer.k141_2312002                            11355 56 -     32913 GAGGA----CA---------------CGAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-TGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21768 56 -     40346 GAGTA----CA---------------CGAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-TGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             22022 56 +    216457 GAGGA----CA---------------CGAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-TGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21812 56 +     39636 GAGGA----CA---------------CGAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-TGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33903 55 -     52013 GAGGA----CA---------------C-AA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44892 56 -    112038 AAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10442 56 +     34062 AAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346686 56 +  18827391 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-Gaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13225 56 -     44032 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-Gaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            308072 56 - 135778131 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2364 59 +     10270 GAGAA----CT---------------CAAA-GTTATCAGTCTT-ACAGTGAAAAGT-gaaaa-agcat--tt-gattag-----gaa--------gga------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 I 2
s Choloepus_hoffmanni.KN194906.1                            609841 59 -    839153 GAGAA----CT---------------CAAA-GTTATCAGTCTT-ACAGTGAAAAGT-gaaag-agcat--tt-gattag-----gaa--------gga------------------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 2
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2589 57 -      4087 GAGGA----CA---------------TGGA-GTTTTCTCTCTT-AGag-------t-gtaaa-agcat--tt-ggctag-----gaa--------tca-g-a----------------------------ag-a
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412480 56 -   2368649 AAGGA----CA---------------CACA-GTTTTCATTCTT-ACGA-------T-A-AAA-ATCGT--TT-GGCTAG-----GAT--------TCG-G-A----------------------------AG-A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382362 56 - 200372422 AAGGA----CA---------------CACA-GTTTTCATTCTT-ACga-------t-a-aaa-atcgt--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5915 56 -     84244 AAGGA----CA---------------CACA-GTTTTCATTCTT-ACAA-------T-A-AAA-ATCGT--TT-ggctag-----gat--------tca-g-a----------------------------ag-a
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35810943 57 +  53390261 GAGGA----CA---------------CAAA-ATTATCACTGTT-AAAG-------T-AGAGA-AGCAT--TT-GGCTAG-----GAA--------TCA-G-A----------------------------AA-C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6512 57 -      8242 GAGAA----TT---------------CGAG-ATTAGCTCTCTC-ACAG-------T-GGAAA-AGTAT--TT-GGCTAG-----GAA--------TCA-G-A----------------------------AA-A
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47654 57 -     83289 GAGGT----CA---------------TAGA-ATTACCACTGCC-ACag-------t-acaaaaagcat--tt-ggctgg-----a-a--------tca-g-t----------------------------aa-a
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213119174 57 - 224834208 GAGGT----CA---------------TAGA-TTGACCACAATC-ACag-------t-acaaaaagcatt--t-gcctag-----a-a--------tca-g-a----------------------------aa-a
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_205242                98 53 +      5812 GAGGA----CA---------------CAAA-ATTATC-----Ttacag-------t-ggaaa-agcat--tt-ggctat-----gat--------tca-g-a----------------------------aa-c
i Crocidura_indochinensis.CroInd_scaffold_205242         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              8114 57 +     87169 AAGAA----CA---------------CAAA-ATTACTAATCTt-acag-------t-ggaaa-agcat--tt-ggctca-----gaa--------tca-g-a----------------------------aa-a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650393 56 -   1526836 AATGA----AA---------------TGAA-ATCGGTGC-CTT-ATAA-------T-ACAaa-agcat--tt-ggccag-----gaa--------tca-g-a----------------------------aa-a
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  23019 50 +     50838 AAAGA----C-----------------AAA-TTTATCACTGTT-ACAA-------C-ACAGA-AACAT--TT-GGGCAg-----gaa--------tca------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 11
s Cuniculus_paca.CunPac_flattened_line_7025                  12507 52 +     36344 TAGGA----CA---------------CAAA-ATTATCACTCTt-acag-------t-gcaga-agcat--tt-ggccag-----gaa--------tca------------------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 12
s Dasyprocta_punctata.DasPun_flattened_line_15900            31948 52 +     75252 CAGGA----CA---------------CAAA-ATTATCGCTGTT-ACag-------t-acaga-agcat--tt-ggccag-----gga--------tca------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 12
s Dasypus_novemcinctus.JH564415.1                          2113415 51 -   2246927 GAGGA----CA---------------CCAC-GTTTCCTCTCTT-Ggag-------t-ggaaa-agcac--gt-ggc-ag-----gca--------cca------------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 2
s Delphinapterus_leucas.KZ290073.1                        18635501 57 -  35494412 GAAGA----CA---------------CCAA-ATTACCACTCTt-acac-------t-ggaaa-aacat--tt-ggctag-----gaa--------cca-c-a----------------------------aa-a
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11869224 57 -  20541912 GAGGG----CC---------------CATA-ATTATTACTCTT-ACag-------t-ggaga-aacat--tt-ggctag-----gaa--------tca-g-a----------------------------aa-a
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668035 57 -   1390856 GAGGA----CA---------------CAAA-ATTATCACTCTT-ACAG-------T-GGAAA-AGCAT--TT-GGCTAA-----GAA--------GCA-G-A----------------------------Aa-a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 224
s Diceros_bicornis.DicBicMic_scaffold_5955                  142840 57 -    198055 GAGGA----CA---------------CAAA-ATGATCACTCTT-ACAG-------T-GGAAA-AGCAT--TT-GGCTAG-----GAA--------GCA-G-A----------------------------AA-A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 218
s Dipodomys_ordii.KN672350.1                              18955763 56 -  37912305 TAGGA----CA---------------CAA--ATTGTCACTTAT-CTAg-------g-acaaa-aacat--tt-gcctca-----gga--------tca-g-a----------------------------aa-a
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                   1367 56 +     14058 TAGGA----CA---------------CAA--ATTGTCACTTAT-CTAG-------G-ACaaa-aacat--tt-gcctca-----gga--------tca-g-a----------------------------aa-a
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_341948                  113 47 -      1676 CAAGA----CA---------------CAAA-ATTATCACTCTT-ACAG-------T-ACAAC-AGCat--tt-g----------gaa--------tca------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_341948            C 0 I 45
s Echinops_telfairi.JH980293.1                            62858721 56 - 111700974 GAGGA----CA---------------GGAA-GTTATCACTTTT-ACAG-------T-Gga-a-aacat--tg-aagtag-----aaa--------tcg-g-a----------------------------at-g
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9909 57 +     19438 GAGGA----CA---------------CAAA-ATTATCACTCTT-ACAA-------T-gaaaa-agcat--tt-ggctgg-----gaa--------ttg-g-a----------------------------aa-a
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       246228 57 -    607251 AAAGA----CA---------------CAAA-ATTATCACTGTT-ACag-------t-agaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9114072 27 -  10337057 GAGGACGTACA---------------TATA-ATTATCATTCTT-------------------------------------------------------------------------------------------
i Elephantulus_edwardii.JH947257.1                       C 0 I 22
s Ellobius_lutescens.LOEQ01008920.1                          35376 56 +    110024 GAGGT----CA---------------TAAA-ATGACCAAAATC-ACAG-------T-ACATAAAGCAT---T-GACTAG-----A-A--------TCA-G-A----------------------------AA-A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 7
s Ellobius_talpinus.LOJH01026522.1                           17297 56 +     18970 GAGGT----CA---------------TAAA-ATGACCAAAATC-ACAG-------T-ACATAAAGCAT---T-GACTAG-----A-A--------TCA-G-A----------------------------AA-A
i Ellobius_talpinus.LOJH01026522.1                       C 0 I 7
s Enhydra_lutris.KZ291758.1                               24925764 55 +  41312741 GAGAA----CG---------------CAAA-ATTAt--gtctt-acag-------t-tgaaa-agcat--tt-ggctta-----gaa--------tca-g-a----------------------------aa-a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12582995 56 +  14770903 GAGGA----CA---------------CAAA-ATTATTACTCTt-acag-------t-g-aaa-agcat--tt-agctag-----gaa--------tca-g-a----------------------------aa-a
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045502 57 -   4378816 GAGGA----CA---------------CAAA-ATTATCACTCTT-ACAc-------a-ggaaa-agcat--tt-ggctaa-----gaa--------tca-g-a----------------------------aa-a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379432 57 +  39960074 GAGGA----CA---------------CAAA-ATTATCACTCTT-ACAc-------a-ggaaa-agcat--tt-ggctaa-----gaa--------tca-g-a----------------------------aa-a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415414 57 -    498745 GAGGA----CA---------------CAAA-ATTATCACTCTT-ACAc-------a-ggaaa-agcat--tt-ggctaa-----gaa--------tca-g-a----------------------------aa-a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671700 57 +   7059049 GAGGA----CA---------------CAGA-ACCATCACACTTAACAG-------T-AAAGA-AGCAT--TT-GTCTAT-----GAA--------TGA-A-A----------------------------AT--
i Erinaceus_europaeus.JH835339.1                         C 0 I 6
s Erythrocebus_patas.Contig38                               266214 56 +  21539334 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-Gaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74704 57 -    133382 GAAGA----CA---------------CAAA-ATTACCACTCTt-acag-------t-ggaaa-aacat--tt-ggctag-----gaa--------cca-c-a----------------------------aa-g
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2426 57 +     25849 GAAGA----CA---------------CAAG-ATTACCACTCTt-acag-------t-ggaaa-aacat--tt-ggctag-----gaa--------cca-c-a----------------------------aa-g
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250854 57 - 206538554 AAGAA----CA---------------TAAA-ATTATCAGCCTT-AGag-------t-agaaa-agcat--tt-ggctca-----gaa--------tca-a-a----------------------------aa-a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120810 57 - 205367284 AAGAA----CA---------------TAAA-ATTATCAGCCTT-AGAG-------T-AGAAA-AGCAT--TT-GGCTCA-----GAA--------TCA-A-A----------------------------AA-A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  1452 56 +     25330 AAGAA----CA---------------TAAA-ATTATCAGTCTT-AGAG-------T-A-AAA-AGCAT--TT-GGCTCA-----GAA--------TCA-A-A----------------------------AA-A
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2926307 52 -   3816255 AAGGA----CA---------------CAAA-ATTATCACTTTT-ACAG-------T-ACAGA-AGCAT--TT-GGCCAG-----GAA--------TCG------------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 I 10
s Galeopterus_variegatus.GalVar_scaffold_51812                5297 57 -     28519 GAGGA----CA---------------CAAA-ATGATCACTCTt-acag-------t-gcgaa-atcat--tt-ggctag-----gaa--------taa-g-a----------------------------aa-a
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2486 57 +    660261 AAAGA----CA---------------CAAA-ATTATCACTCTT-ACag-------t-agaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            5305 55 -      6791 GAGGA----CA---------------CAAA-ATTGTCACTCTT-a--g-------t-gcaaa-agcat--tt-ggctag-----gaa--------tca-g-g----------------------------aa-a
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_935316                                1316 53 +     34797 AAGGA----CA---------------CAAA-ATTTTCATTCTT----A-------T-A-AAA-AGCAT--TT-GGCTAG-----GAA--------TCA-G-A----------------------------AG-A
i Gorilla_beringei.k141_935316                           I 271 C 0
s Gorilla_gorilla.LT578336.1                                 75903 53 +  33314783 AAGGA----CA---------------CAAA-ATTTTCATTCTT----A-------T-a-aaa-agcat--tt-ggctag-----gaa--------tca-g-a----------------------------ag-a
i Gorilla_gorilla.LT578336.1                             I 271 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    7231 55 -     78134 GAGGA----CA---------------CACA-ATTGTCACTTTT---AG-------T-GCAaa-agcat--tt-ggctaa-----gaa--------tca-g-a----------------------------aa-a
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34486 48 -    327341 AAGAA----CA---------------CA----------GTCTT-AGag-------t-ggaaa-agcat--tt-ggctca-----gaa--------tca-g-a----------------------------aa-a
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 16153 56 +     48891 AAAGA----CA---------------CAA--ATTATCACTCTt-acaa-------t-agaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938747 52 -  22651954 GAGGA----CA---------------CAAA-ATTATCACTCTT-ACAG-------T-TCAGA-AGCAT--TT-GGCCAG-----GAA--------TCA------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 I 12
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6454 53 +      8654 ----A----CA---------------TGAA-GTTATCACTCTT-AGag-------t-gagaa-aagtt--tt-ggctag-----aaa--------cca-g-a----------------------------ag-a
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11539 57 -     36432 GAAGA----CA---------------CAAA-ATTATCACTCTt-acag-------t-ggaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                305 56 -      8370 GA-AA----CA---------------CAAA-ATTATCACTCTt-acaa-------t-ggaaa-agcgt--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145871 56 -    630532 AAGGA----CA---------------CAAA-ATTTTCCTTCTT-ATAA-------T-C-AAA-AGCAT--TT-GGCTAG-----GAA--------TCA-G-A----------------------------AG-A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  74149 57 +     83186 AAGAA----CA---------------CAAA-ATTACCAGTCTt-acag-------t-ggaaa-agcat--tt-ggctca-----gaa--------tca-g-a----------------------------aa-a
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75684 52 +    143317 TGAGA----CA---------------CAAA-ATTATCAGTACT-ACAG-------T-ACAGC-AGCAT--TT-g-----gccaggaa--------tca------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 12
s Hylobates_agilis.k141_1155965                               8918 56 +     12352 AAGGA----CA---------------CAAA-ATTTTCCTTCTT-ATAA-------T-A-AAA-AGCAT--TT-GTCTAG-----GAA--------TCA-G-A----------------------------AG-A
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              16105 56 +     55766 AAGGA----CA---------------CAAA-ATTTTCCTTCTT-ATAA-------T-A-AAA-AGCAT--TT-GTCTAG-----GAA--------TCA-G-A----------------------------AG-A
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055633 56 + 191637585 AAGGA----CA---------------CAAA-ATTTTCCTTCTT-ATAA-------T-A-AAA-AGCAT--TT-GTCTAG-----GAA--------TCA-G-A----------------------------AG-A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804511 56 +  11177569 AAGGA----CA---------------CAAA-ATTTTCCTTCTT-ATAA-------T-A-AAA-AGCAT--TT-GTCTAG-----GAA--------TCA-G-A----------------------------AG-A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11550 57 -    135385 GAGGA----CA---------------CAAA-ATTATCTCTCCC-Acag-------t-acaga-agtat--tt-cgctag-----gaa--------tca-g-a----------------------------aa-a
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390801 56 +   7955117 GAGGA----CA---------------CAA--ATTGTCACTCTT-ATAG-------T-TCaaa-agcat--tt-gtcgag-----gac--------aca-g-c----------------------------aa-a
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_69447               13605 57 -     16823 GAAGA----CA---------------CCAA-ATTACCACTCTT-ACGC-------T-GGAAA-AACAT--TT-ggctgg-----gaa--------cca-c-g----------------------------aa-a
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1243285 56 +   9596543 GAGGA----CA---------------CAAA-ATTGTCACTCTT-ATAG-------T-ACAGA-AACAT--TT-AACTAG-----G-A--------Tca-g-a----------------------------aa-a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75443 57 -     97402 GAAGA----CA---------------CAAA-ATTACCACTCTt-acag-------t-ggaaa-aacat--tt-ggctag-----gaa--------cca-c-a----------------------------aa-a
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45729 56 +    110728 GAGGA----CA---------------CAAA-ATTGTCATTCTC-ATAA-------T-A-AAA-AGCAT--TT-GGGCGG-----GAA--------TCA-G-A----------------------------AG-A
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1682 56 -     25587 GAGGA----CA---------------CAGG-ATTATTACTCTt-acag-------t-g-aaa-agcat--tt-cggtag-----gaa--------tca-g-a----------------------------aa-a
i Lasiurus_borealis.LasBor_scaffold_61236                C 0 I 39
s Leontocebus_fuscicollis.k141_3470480                        1174 55 -     23187 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1488 55 -     14280 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-A-AAA-AGCTT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                        1128 55 +      3713 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1314 55 +      8855 CAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-A-AAA-AGCAC--TT-GGGCAG-----GAA--------TCC-G-A----------------------------AG-A
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         6115 55 -     13645 CAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-A-AAA-AGCAC--TT-GGGCAG-----GAA--------TCC-G-A----------------------------AG-A
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        817034 57 -   3914936 GAGAA----CA---------------CGAA-ATTATCAGTCTT-ACAG-------T-ggaaa-agcat--tt-ggctta-----gaa--------tca-g-a----------------------------aa-a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     23299 57 +     24238 GAGGA----TA---------------TGAA-CATATCACTTTt-acag-------t-acaga-agtat--tt-ggctag-----gaa--------ttg-t-a----------------------------aa-g
i Lepus_americanus.LepAme_scaffold_56121                 C 0 I 6
s Lipotes_vexillifer.KE559953.1                             344787 57 +    662738 GAAGA----CA---------------CCAA-ATTACCACTCTt-acac-------t-ggaaa-aacat--tt-ggctgg-----gaa--------cca-c-a----------------------------aa-a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               337144 56 -   1826925 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39088195 53 +  43346337 ----A----CA---------------TGAA-GTTATCACTCTT-ATAT-------T-gggaa-agcat--tt-ggctag-----gaa--------cca-g-a----------------------------aa-a
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618438 58 +  59628241 AAGAA----CA---------------CAAA-ATTATTAGTCTt-acag-------t-ggaaa-agtat--tt-ggaata-----gaa--------tcagg-a----------------------------aa-a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48541 56 -     61512 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-Aaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 376203 56 -  60120075 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28471 56 +     30207 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3309 56 -      5035 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28424 56 +     30527 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39600 56 -     50087 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49345 56 +     51645 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418547 56 - 187317192 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402778 56 +  25927173 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  51949 56 -     62418 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-Aaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4480 56 +     14901 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48422 56 +     59329 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274329 56 +    668171 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  2961 56 -      5049 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 6128 56 +     17132 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226882 57 -    270270 GAGGA----CA---------------CAAA-ATTATCACTCTT-ACAA-------T-gaaaa-agcat--tt-gaccgg-----gaa--------tca-g-a----------------------------aa-a
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325611 56 +  24302211 CAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360442 56 -    752769 CAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-agcat--tt-ggctag-----gat--------tca-g-a----------------------------ag-a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             677061 56 -    737560 TAGGA----CA---------------CAAA-ATTATCACAGTT-ATAG-------T-ATAAA-AGCCT--TT-G-Ttaa-----gaa--------taa-g-a----------------------------aa-g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             224357 54 +    317179 TAGGA----CA---------------CGAA-ATTACCAC--TT-GTAG-------T-ATAAA-AGCCT--TT-G-TTAA-----GTA--------TAa-g-a----------------------------aa-g
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7505001 56 +  40650429 GAGGA----CA---------------CAA--ATTGTCACTCTT-ATAG-------T-TCaaa-agcat--tt-ggcgag-----gac--------aca-g-c----------------------------aa-a
i Marmota_marmota.CZRN01000018.1                         C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                       154208 57 +    207569 GAGGA----TA---------------CAAA-ATTATTACTCTT-ACAG-------T-ggaaa-agcat--tt-ggctag-----gaa--------tca-g-a----------------------------aa-a
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29776 55 -     74585 GAGAA----TG---------------CAAA-ATTAt--gtctt-acag-------t-ggaaa-agcat--tt-ggctta-----gaa--------tca-g-a----------------------------aa-a
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53357 57 -    140813 GAGGT----CA---------------TGGA-ACAACCACTCTC-ACAA-------T-ACAAAAAGCAT--TT-GGCTAG-----A-A--------TCA-C-A----------------------------AA-A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17433518  7 +  29670104 ------------------------------------------------------------------------------------------------tg-g-a----------------------------aA-A
i Mesocricetus_auratus.KB708134.1                        I 804 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     91070 57 +     93471 GAAGA----CA---------------CAAA-ATTACCACTCTt-acac-------t-ggaaa-aacat--tt-gactag-----gaa--------cca-c-a----------------------------aa-a
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12724 55 +     17804 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-T-AAA-AGCAC--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                451 55 +      5551 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-T-AAA-AGCAC--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21535 55 -     26561 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-T-AAA-AGCAC--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49902 56 +    145209 GAGGA----CA---------------TGAA-CTTATCACTTTC-ACAG-------T-Gga-a-agcac--tt-aagtag-----aaa--------tcg-g-a----------------------------at-g
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188803 57 +    200668 GAGGA----CC---------------CATA-ATTATTACTCTT-ACag-------t-ggaga-aacat--tt-ggctag-----gag--------tca-g-a----------------------------aa-a
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966784 56 +  27267610 GAGGT----TA---------------TAAA-ATGACTAAAATC-ACAG-------T-ACAAAAAGCAT---T-GACTAG-----A-A--------TCA-G-A----------------------------AA-A
i Microtus_ochrogaster.CM001695.1                        C 0 I 7
s Miniopterus_natalensis.LDJU01000034.1                    6368623 57 -   8254450 GAGGA----CA---------------CAAA-ATTATTACTCTt-acag-------t-ggaaa-aacat--tt-ggctag-----gaa--------tca-g-g----------------------------aa-a
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46354 57 -     48117 GAGGA----CA---------------CAAA-ATTATTACTCTt-acag-------t-ggaaa-aacat--tt-ggctag-----gaa--------tca-g-g----------------------------aa-a
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25710 56 -     27822 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12267 57 +     27589 GAGAA----CA---------------CGAA-ATTATCAGTCTT-ACTG-------T-GGAAA-AGCAT--TT-ggctta-----gaa--------tca-g-a----------------------------aa-a
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   363179 57 +    437263 GAAGA----CA---------------CCAA-ATTACCACTCTt-acac-------t-ggaaa-aacat--tt-ggctag-----gaa--------cca-c-a----------------------------aa-a
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183248 57 +    366855 GAGGG----CA---------------CATA-ATTATTACTCTT-ACag-------t-ggaga-aacat--tt-ggccag-----gaa--------tca-g-a----------------------------aa-a
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32384 57 -     82753 AAAGA----CA---------------CAAA-ATTATCACTCTT-ACag-------t-agaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   22236 57 -     63510 AAGAA----CA---------------CAAA-ATTACCGGTCTT-AGag-------t-ggaaa-agcat--tt-ggctca-----gac--------tca-g-a----------------------------aa-a
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45611 56 +     47283 GAGGG----CA---------------CAAA-ATTATTACTCTt-acag-------t-g-aaa-ataat--tt-agctag-----gag--------tca-g-a----------------------------aa-a
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35598211 48 + 120012414 GAGGT----CA---------------TATA-ATGAGC----------G-------T-ACAAAAAGCAT--TT-GGCTAG-----A-A--------TCG-G-A----------------------------AA-G
i Mus_caroli.LT608237.1                                  C 0 I 8
s Mus_musculus.chr8                                       41691518 57 + 129401213 GAGGT----CA---------------TATA-ATGACCACTTTT-ACAG-------T-ACAAAAAGCAT--TT-GGCTAG-----A-A--------TCA-G-A----------------------------AA-A
i Mus_musculus.chr8                                      C 0 I 8
s Mus_pahari.LT608297.1                                   58219478 57 +  89631738 GAGGT----CA---------------TATA-ATGACCACTTTT-ACAG-------T-ACAAAAAGCAT--CT-GGCTAG-----A-A--------TCA-G-A----------------------------AA-A
i Mus_pahari.LT608297.1                                  C 0 I 8
s Mus_spretus.CM004101.1                                  39500437 57 + 130317789 GAGGT----CA---------------TATA-ATGACCACTTTT-ACAG-------T-ACAAAAAGCAT--TT-GGCTAG-----A-A--------TCA-G-A----------------------------AA-A
i Mus_spretus.CM004101.1                                 C 0 I 8
s Muscardinus_avellanarius.MusAve_scaffold_5560               3319 53 -    124358 GAGGA----CA---------------CAAA-ATTGTCACTc---a--g-------t-gcaaa-agcat--tt-ggctgg-----gaa--------tca-g-g----------------------------aa-a
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358726 55 +  14710649 GAGAA----TG---------------CAAA-ATTAt--gtctt-acag-------t-tgaaa-agcat--tt-ggctta-----gaa--------tca-g-a----------------------------aa-a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1405 50 -     27262 AAAGA----C-----------------AAA-ATTATCACTATT-ATAG-------T-ACAGA-AACAT--TT-GCCCAG-----GAA--------TCA------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 I 12
s Myotis_brandtii.KE162005.1                               9797616 56 +  10118263 GAGGA----CA---------------CAAA-ATTATTACTCTt-acag-------t-g-aaa-ataat--tt-agctag-----gaa--------tca-g-a----------------------------aa-a
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391790 56 +   6019432 GAGGA----CA---------------TAAA-ATTATTACTCTt-acag-------t-g-aaa-ataat--tt-agctag-----gaa--------tca-g-a----------------------------aa-a
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387829 56 +   4330536 GAGGA----CA---------------CAAA-ATTATTACTCTt-acag-------t-g-aaa-ataat--tt-agctag-----gaa--------cca-g-a----------------------------aa-a
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6616 56 +     18357 GAGGA----CA---------------CAAA-ATTATTACTCTt-acag-------t-g-aaa-ataat--tt-agctag-----taa--------tca-g-a----------------------------aa-a
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950385 57 +   3037898 GGGGA----CA---------------CAAA-ATGATTGCTCTC-ACag-------t-acaaaaaacat--tt-ggctag-----g-a--------tca-g-a----------------------------ga-a
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              32495 51 +     34575 AAGGA----CA---------------CACA-ATTTTCATTCTT-ATAA-------T-A-AAA-ATCAT--TT-GG----------AT--------TCG-G-A----------------------------AG-A
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469714 57 -  31847680 GAGAA----CA---------------CAAA-ATTATCAGTCTt-acag-------t-ggaaa-aacat--tt-ggctta-----gaa--------tca-g-a----------------------------aa-a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235837 57 -   7148211 GAAGA----CA---------------CCCA-ATTACCACTCTt-acac-------t-ggaaa-aacat--tt-ggctag-----gaa--------cca-c-a----------------------------aa-a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131528 57 -    149072 GAGGA----CA---------------CGTA-ATTGTTACTCTT-ACAG-------T-ggaaa-agcat--tt-gactag-----gaa--------tcg-g-a----------------------------aa-a
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56806 56 -    132029 ACAGA----CA---------------CAAA-ATTTTCCTTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAA--------TCA-G-A----------------------------AG-A
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12901 56 -     16345 ACAGA----CA---------------CAAA-ATTTTCCTTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAA--------TCA-G-A----------------------------AG-A
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18790 56 +     22201 ACAGA----CA---------------CAAA-ATTTTCCTTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAA--------TCA-G-A----------------------------AG-A
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8417020 56 -  22158432 ACAGA----CA---------------CAAA-ATTTTCCTTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAA--------TCA-G-A----------------------------AG-A
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29195 56 -     54323 ACAGA----CA---------------CAAA-ATTTTCCTTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAA--------TCA-G-A----------------------------AG-A
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                202143 58 +   9404916 AAGAA----CA---------------CAAA-ATTATTAGTCTT-Ccag-------t-ggaaa-agcat--tt-ggaata-----gaa--------tcagg-a----------------------------aa-a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059679 50 -  11899542 AAAGA----C-----------------AAA-ATTATCACTGTT-ACAA-------C-ACAGA-aacat--tt-ggctag-----gaa--------tca------------------------------------
i Octodon_degus.JH651603.1                               C 0 I 12
s Odobenus_rosmarus.KB229312.1                             1455483 57 +   2017862 GAGAA----CA---------------CAAA-ATTATCAGTCTT-ACAG-------T-ggaaa-agcat--tt-ggctta-----gaa--------tca-g-a----------------------------aa-a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442780 57 -    630418 AAAGA----CA---------------CAAA-ATTATCACTCTT-ACag-------t-agaaa-aacat--tt-ggctaa-----gaa--------tca-c-a----------------------------aa-a
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22437 57 +    150152 AAAGA----CA---------------CAAA-ATTATCACTCTT-ACag-------t-agaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97400 56 -    140218 GAGGT----CA---------------TAAA-ATGACcaaagtc-acag-------t-acaaaaagcat---t-gactag-----t-a--------tca-g-a----------------------------aa-a
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 7
s Onychomys_torridus.OnyTor_scaffold_28377                    7943 85 -     41509 GAGGT----TG---------------TAGA-ATGACCACAATC-CCAG-------T-ACAAAAAGCAT--TT-GGCTAC-----A-A--------TAA-A-AACAAAACAAAACAAAACAAAACAAAAAAAA-C
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8106250 57 +  10937097 GAAGA----CA---------------CAAA-ATTACCACTCTt-acac-------t-ggaaa-aacat--tt-gcctgg-----gaa--------cca-c-a----------------------------aa-a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3240 56 +     11607 GAGGA----CA---------------TGAA-GTTATCACTCTt-acag-------t-ggaaa-agcat--tt-ggcta------aag--------tca-g-a----------------------------ag-g
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107109588 57 - 174332312 GAGGA----TA---------------CGAA-CATATCACTTTt-acag-------t-acaga-agtat--tt-ggctag-----gaa--------ttg-t-a----------------------------ac-a
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 6
s Otocyon_megalotis.JAEUCK010005147.1                        43305 58 +    559221 AAGAA----CA---------------CAAA-ATTATTAGTCTT-ACAG-------T-GGAAA-AGCAT--TT-GGAAAA-----GAA--------TCAGG-A----------------------------AA-A
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26411179 56 -  44047080 AAAGA----CA---------------CAA--ATTATCACTCTt-acaa-------t-agaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11802 56 +     17875 AAAGA----CA---------------CAA--ATTATCACTCTt-acaa-------t-agaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02004363.1                                  796 54 +      1263 AAGGA----CA---------------CAAA-ATTTTCATTCTT----A-------T-A-AAA-AGCAT--TT-GGCTAG-----GAA--------TCA-GGA----------------------------AG-A
i Pan_paniscus.AJFE02004363.1                            I 14 C 0
s Pan_troglodytes.NBAG03003091.1                             17195 55 -     26668 AAGGA----CA---------------CAAA-ATTTTCATTCTT----A-------T-ATAAA-AGCAT--TTTGGCTAG-----GAA--------TCA-G-A----------------------------AG-A
i Pan_troglodytes.NBAG03003091.1                         I 31 C 0
s Panthera_onca.PanOnc_flattened_line_3271                   28784 57 -    230217 AAGAA----CA---------------TAAA-ATTAACAGTCTT-ACAG-------T-AGAAA-AGCAT--TT-GGCTCC-----GAA--------TCA-G-A----------------------------AA-A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18466025 57 -  18783137 AAGAA----CA---------------TAAA-ATTAACAGTCTt-acag-------t-agaaa-agcat--tt-ggctcc-----gaa--------tca-g-a----------------------------aa-a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976624 57 +   8748460 AAGAA----CA---------------TAAA-ATTAACAGTCTt-acag-------t-agaaa-agcat--tt-ggctcc-----aaa--------tca-g-a----------------------------aa-a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622697 57 +   2937107 AAAGA----CA---------------CAAA-ATTATCACTCTt-acaa-------t-agaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246626 56 - 183742232 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12911 56 +     21308 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295654 56 -  20919399 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25553 56 -     27687 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2230 56 +     10553 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  2191 56 -     10386 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18904 57 +     78924 ATGAA----CA---------------CAAA-ATTACCAGTCTT-AGAG-------T-AGAAA-AGCAG--TT-GACTTA-----GAA--------TCA-G-A----------------------------AA-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7881 47 +      9367 -----------------------------C-TTTGTTACTTAT-ATAG-------G-ACAAA-AACAT--TT-ggctca-----gga--------tca-g-c----------------------------aa-a
i Perognathus_longimembris.PerPac_flattened_line_89005   I 2 C 0
s Peromyscus_maniculatus.KI615324.1                         251153 27 +  18517816 -----------------------------------------------------------AAAAAACAT--TT-GGCTAC-----a-a--------tca-g-a----------------------------aa-a
i Peromyscus_maniculatus.KI615324.1                      I 29 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35717  3 -     56120 -----------------------------------------------------------------------------------------------TCA------------------------------------
i Petromus_typicus.PetTyp_scaffold_17301                 C 0 I 12
s Phocoena_phocoena.PhoPho_flattened_line_24159               7771 57 -     63832 GAAGA----CA---------------CCCA-ATTACCACTCTt-acac-------t-ggaaa-aacat--tt-ggctag-----gaa--------cca-c-a----------------------------aa-a
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5876 56 +     55023 AAGCA----CA---------------CAAA-ATTTTCATTCTt-ataa-------t-a-gaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5399 56 -     89929 AAGCA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-gaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            5987 56 +     40849 AAGCA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-gaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257716 56 +  14605196 AAGCA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-GAA-ATCAT--TT-GGCTAG-----GAT--------TCG-G-A----------------------------AG-A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             8107 56 +     22231 GAGGA----CA---------------CAAA-ATTATTACTCTt-acag-------t-g-aga-agctt--tt-agctaa-----gaa--------tca-g-a----------------------------aa-a
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             67241 56 +    207309 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8336 56 -     25401 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               34082 56 +     58159 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34358 56 +     63561 GAGGA----CA---------------CAGA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           34113 56 +     51148 GAGGA----CA---------------CAGA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              559089 56 -   4542175 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           34097 56 +     51125 GAGGA----CA---------------CAGA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            5019 57 +     19503 GAAGA----CA---------------CAAA-ATTACCACTCTt-acag-------t-ggaaa-aacat--tt-ggctag-----gaa--------cca-c-a----------------------------aa-a
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10529 56 +     39866 GAGGA----CA---------------CGAA-ATTGTCATTCTT-AAAA-------T-A-AAA-AGCAT--TT-TGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5611 56 -      9282 GAGGA----CA---------------CGAA-ATTGTCATTCTT-AAAA-------T-A-AAA-AGCAT--TT-TGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       45015 56 -     87950 GAGGA----CA---------------CGAA-ATTGTCATTCTT-AAAA-------T-A-AAA-AGCAT--TT-TGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45409 56 -     88961 GAGGA----CA---------------CGAA-ATTGTCATTCTT-AAAA-------T-A-AAA-AGCAT--TT-TGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10107 56 -     39403 GAGGA----CA---------------CGAA-ATTGTCATTCTT-AAAA-------T-A-AAA-AGCAT--TT-TGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          45059 56 +     87928 GAGGA----CA---------------CGAA-ATTGTCATTCTT-AAAA-------T-A-AAA-AGCAT--TT-TGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         10106 56 -     60166 GAGGA----CA---------------CGAA-ATTGTCATTCTT-AAAA-------T-A-AAA-AGCAT--TT-TGGCAG-----GAA--------TCA-A-A----------------------------AG-A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      17027 56 -     67232 GAGGA----CA---------------CGAA-ATTGTCATTCTT-AAAA-------T-A-AAA-AGCAT--TT-TGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          44959 56 -     90634 GAGGA----CA---------------CGAA-ATTGTCATTCTT-AAAA-------T-A-AAA-AGCAT--TT-TGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46426 56 +     89403 GAGGA----CA---------------CGAA-ATTGTCATTCTT-AAAA-------T-A-AAA-AGCAT--TT-TGGCAG-----GAA--------TCA-A-A----------------------------AG-A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182566 53 - 189387572 AAGGA----CA---------------CAAA-ATTTTCATTCTT----A-------T-A-AAA-AGCAT--TT-GGCTAG-----GAA--------TCA-G-A----------------------------AG-A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197308 53 -   9816681 AAGGA----CA---------------CAAA-ATTTTCATTCTT----A-------T-a-aaa-agcat--tt-ggctag-----gaa--------tca-g-a----------------------------ag-a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              31074 56 +     69807 AAAGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-Aaa-atcat--tt-ggctag-----gat--------tcg-a-a----------------------------ag-a
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48257 56 -     80239 AAAGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-atcat--tt-ggctag-----gat--------tgg-a-a----------------------------ag-a
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 2986 53 -     12774 ----A----CA---------------TGAA-GTTATCACTCTT-AGag-------t-gagaa-aagtt--tt-ggctag-----aaa--------cca-g-a----------------------------ag-a
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Psammomys_obesus.NESX01036366.1                            40890 57 +     52041 GAGGT----CA---------------TAGA-ACAACCCCTCTC-ACag-------t-acaaaaagcat--tt-ggctag-----a-a--------tca-c-a----------------------------aa-a
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55887 57 -     66298 GAGGA----CA---------------CATA-ATTATTACtgtt-acag-------t-ggaga-aacat--tt-ggctag-----gga--------tca-g-a----------------------------aa-g
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8261 55 -     18639 GAGAA----CG---------------TAAA-ATTAT--GTCTt-acag-------t-tgaaa-agcat--tt-ggctta-----gaa--------tca-g-a----------------------------aa-a
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844457 57 -  28871421 GAGGA----CA---------------CAAA-ATTATCACTCTT-ACAA-------T-gaaaa-agcat--tt-ggccgg-----gaa--------tcg-g-a----------------------------aa-a
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3540973 57 -   4952924 GAGGA----CA---------------CAAA-ATTATCACTCTT-ACAA-------T-gaaaa-agcat--tt-ggccgg-----gaa--------ttg-g-a----------------------------aa-a
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18103017 57 +  38429054 AAGAA----CA---------------TAAA-ATTATCAGTCTt-acag-------t-agaaa-agcat--tt-ggctca-----gaa--------tca-g-a----------------------------aa-a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             30443 56 +     91421 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-Aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  156994 56 -   7812017 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-Aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11294 56 +     72585 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5298 57 -     55207 AAAGA----CA---------------CAAA-ATTATCACTCTT-ACag-------t-agaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37026091 57 -  90668790 GAGGT----CT---------------TATA-ATGATCACTTgc-acag-------t-gcaaaaagcat--tt-ggctag-----a-a--------tca-g-a----------------------------aa-a
i Rattus_norvegicus.chr16                                C 0 I 8
s Rhinolophus_sinicus.LVEH01000134.1                       2918356 57 +   3329780 GAGGA----CA---------------CAAA-ATTATCACTCTG-CCAG-------T-ggaaa-agcat--tt-ggctag-----gaa--------tca-g-a----------------------------aa-a
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4900 56 +      7119 AAGGA----CG---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125570 56 + 195417433 AAGGA----CG---------------CAAA-ATTTTCATtctt-ataa-------t-a-aaa-atcat--tt-ggCTAG-----GAT--------TCG-G-A----------------------------AG-A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239742 56 -   7961872 AAGGA----CG---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-Aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79203 57 -    116970 GAGGA----CA---------------CAAA-ATTATCACTCTt-acaa-------t-gaaaa-agcat--tt-ggctgg------aa--------tcg-gaa----------------------------aa-a
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9800 55 +     12412 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                              1122 55 +      9876 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16718 55 -     24931 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1597 55 +      4564 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4402 55 -      7443 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395435 55 - 209938924 CAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                2019 55 +     10149 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1363 55 +     10417 GAGGA----CA---------------CAAA--TTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14749 57 +     16473 CCAAA----TA---------------CAAA-GTTATCACTCTT-AAaa-------t-agaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111488 57 + 121099817 GAGAA----CA---------------CAAA-ATTGTCATTCTT-AGAG-------TAA-AAA-AGCAT--TT-GGGCAG-----GAG--------TCA-G-A----------------------------AG-A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       33057 57 -     47369 GAGAA----CA---------------CAAA-ATTGTCATTCTT-Agag-------taa-aaa-agcat--tt-gggcag-----gag--------tca-g-a----------------------------ag-a
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33440 57 -     79414 GAGAA----CA---------------CAAA-ATTGTCATTCTT-Agag-------taa-aaa-agcat--tt-gggcag-----gag--------tca-g-a----------------------------ag-a
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              30131 57 -     34454 GAGAA----CA---------------CAAA-ATTGTCATTCTT-Agag-------taa-aaa-agcat--tt-gggcag-----gag--------tca-g-a----------------------------ag-a
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17533 57 -     22428 GAGAA----CA---------------CAAA-ATTGTCATTCTT-Agag-------taa-aaa-agcat--tt-gggcag-----gag--------tca-g-a----------------------------ag-a
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32687 57 -     47109 GAGAA----CA---------------CAAA-ATTGTCATTCTT-Agag-------taa-aaa-agcat--tt-gggcag-----gag--------tca-g-a----------------------------ag-a
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240711 56 +   5703754 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10302 56 +     21866 GAGGA----CA---------------CAAA-ATTGTCATTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGGCAG-----GAA--------TCA-G-A----------------------------AG-A
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122794 57 +    313613 GAGGA----CA---------------CAAA-ATTATCACTGTT-AAag-------t-agaaa-agcat--tt-gggtag-----gaa--------tca-g-a----------------------------aa-a
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1874 56 +     11297 AAGGT----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32267 56 +     58920 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18765 56 -     45317 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26423 56 -     42441 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-T-AAA-ATCAT--TT-GGCTAG-----GAT--------TTG-G-A----------------------------AG-A
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1669243                      4064 56 -      6251 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Semnopithecus_schistaceus.k141_1669243                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          32187 56 -     48123 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-Aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    52945 58 +     77746 GAGGT----CA---------------CAGA-ATGACCACAGTC-ACag-------t-acaaaaagcat--tt-ggctag-----a-a--------tca-g-a----------------------------aaaa
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867554 56 -   1910179 GAGGA----TA---------------CAAA-ATTTCTACCCTTAACAG-------T-GCAAA-ATAAT--TT-G--TTg-----gaa--------tca-t-a----------------------------aa-a
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674774 53 +  18376816 GAGGA----CA---------------CAAA-ATTATC-----Ttacat-------t-ggaaa-agtat--tt-ggctac-----aaa--------tca-a-a----------------------------aa-c
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1872364 56 +   3870691 GAGGA----CA---------------CAA--ATTGTCACTCTT-ATAG-------T-TCaaa-agcat--tt-gtcgag-----gac--------aca-g-c----------------------------aa-a
i Spermophilus_dauricus.KZ294078.1                       C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             16945 57 -     97271 GAGAA----TA---------------CAAA-ATGATTAGTCTT-ACAG-------T-ggaaa-agcat--tt-ggctta-----gga--------tca-g-a----------------------------aa-a
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 467 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             129112 57 +    196729 AAGAA----CA---------------CAAA-ATTACCAGTCTT-AGag-------t-ggaaa-cgcat--tt-ggctca-----gaa--------tca-g-a----------------------------aa-a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6648390 57 +  69701581 GAAGA----CC---------------CAAA-ATTACCACTCTT-TCag-------t-ggaaa-aacat--tt-ggctag-----gaa--------tca-c-a----------------------------aa-a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       394277 56 +   1523678 AAGGA----CA---------------CAAA-ATTTTCCTTCTT-ATAA-------T-A-AAA-AGCAT--TT-GGCTAG-----GAA--------TCA-G-A----------------------------AG-A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17804 57 +     22964 GAGGA----CA---------------CAAA-ATTATTACTCTt-acag-------t-ggaaa-agcat--tt-ggctag-----gaa--------tca-g-g----------------------------aa-a
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      195223 57 +    199430 GAGGA----CA---------------CAAA-ATTATCACTCTT-ACAG-------T-ggaaa-agcat--tt-ggctag-----gaa--------tca-g-a----------------------------aa-a
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    109203 57 -    539355 GAGGA----CA---------------CAAA-ATTATCACTCTt-acag-------t-ggaaa-agtat--tt-ggctag-----gaa--------tca-g-a----------------------------aa-a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4816 57 +      9917 AAGGA----CA---------------CAAA-ACTATCACTTTT-ACTA-------T-ACAGA-AGCAT--TT-ggctaa-----ggc--------tta-g-a----------------------------at-a
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11612 57 +     20590 AAGGA----CA---------------CAAA-ACTATCACTTTT-ACTA-------T-ACAAA-AGCAT--TT-GGCTAA-----GGC--------TTA-G-A----------------------------AT-A
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356437 56 - 186847797 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------C-A-AAA-AACAT--TT-GGCTAG-----GAT--------TCA-G-A----------------------------AG-A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              28042 52 -     33621 AAGCA----CA---------------TAAA-ATTACCATTCTT-ATAG-------T-ATAGA-AACAT--TT-GTCCAG-----GAA--------TCA------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 12
s Tolypeutes_matacus.TolMat_scaffold_31955                   22781 52 -     31044 GAGGA----CA---------------CGAA-GTTATCACTCTT-Cgag-------t-ggaca-agcat--ta-ggctag-----gaa--------tca------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_294                    484133 57 -    610378 GAGAA----CC---------------CATA-ATTATTACTCTT-ACag-------t-ggaga-aacat--tt-ggctag-----gaa--------tca-g-a----------------------------aa-a
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        24176 56 +     26378 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     36974 56 -     78344 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-ATTat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23501 56 +     25722 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31930 56 -     62838 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-ATTAT--TT-GGCTAG-----GAT--------TCG-G-A----------------------------AG-A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31921 56 +     46913 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12659 56 -     28527 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33861 56 -     64340 AAGGA----CA---------------CAAA-ATTTTCGTTCTT-ATAA-------T-a-aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31899 56 -     63452 AAGGA----CA---------------CAAA-ATTTTCGTTCTT-ATAA-------T-a-aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13350 56 +     22490 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-ATTAT--TT-GGCTAG-----GAT--------TCG-G-A----------------------------AG-A
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1316 56 +      9911 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-ATTAT--TT-GGCTAG-----GAT--------TCG-G-A----------------------------AG-A
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                         1111 56 -     33539 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-A-AAA-ATTAT--TT-GGCTAG-----GAT--------TCG-G-A----------------------------AG-A
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258870 56 -   6242583 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-attat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4889 56 +     19340 AAGGA----CA---------------CAAA-ATTTTCATTCTT-ATAA-------T-a-aaa-atcat--tt-ggctag-----gat--------tcg-g-a----------------------------ag-a
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   177992 57 -    200418 GAAGA----CA---------------CAAA-ATGATCACTTTt-acac-------t-ggaaa-aactt--tt-ggctag-----aaa--------tca-c-a----------------------------ag-c
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485793 53 -  10818551 ----A----CA---------------TGAA-GTTGTTACTCTt-atag-------t-gggaa-agcgt--tt-ggctag-----gaa--------cca-g-a----------------------------ag-a
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1840050 57 -   4065304 AATGA----CA---------------CAAA-ATTATCACTTTT-AAAC-------T-ACTaa-agcat--tt-ggcttg-----aac--------tca-g-a----------------------------ag-a
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      14125 57 -     70247 AATGA----CA---------------CAAA-ATTATCACTCTT-AAAC-------T-ACTaa-agcat--tt-ggcttg-----aac--------tca-g-a----------------------------ag-a
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369374 57 -  33153633 GAAGA----CA---------------CAAA-ATTACCACTCTt-acac-------t-ggaaa-aacat--tt-gcctgg-----gaa--------cca-c-a----------------------------aa-a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7561 44 -     21056 GAAAT----TATCCAAATTATTATTCCAAA-ATTATCACTgtt-aaaa-------t-a----------------------------------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 23
s Ursus_maritimus.KK499267.1                                185686 57 +   5085361 GAGAA----CA---------------CAAA-ATTATCAGTCTT-ACAG-------T-ggaaa-agcat--tt-ggctta-----gaa--------tca-g-a----------------------------aa-a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   80507 55 +   5488506 GAAGA----CA---------------CA---ATTATCATTCTt-atag-------t-ggaaa-aacat--tt-ggctaa-----gaa--------tca-t-a----------------------------aa-a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                109037 58 -    112863 AAGAA----CA---------------CAAA-ATTATTAGTCTt-acag-------t-ggaaa-agcat--tt-ggaata-----gaa--------tcagg-a----------------------------aa-a
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        178232 57 -    224448 GAGGA----CA---------------CAAA-ATTGTCACTCTT-ATAG-------T-ACaaa-agcat--tt-ggtgag-----gac--------ttg-g-g----------------------------aa-a
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732         32689 59 -     86975 GAGAA----CA---------------CAAA-ATTATCAGTCTt-acag-------t-ggaaa-agcattttt-ggctta-----gaa--------tcg-g-a----------------------------aa-a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       4965 51 -     63895 GAGGA----CA---------------AAAA-A-----AATCAC-Acag-------t-acaaa-aacat--tt-ggctag-----g-a--------tca-g-a----------------------------aa-a
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1335 57 +      3447 GAAGA----CA---------------CAAA-ATTACCACTCTt-acac-------t-ggaaa-aacat--tt-gactag-----gaa--------cca-c-a----------------------------aa-a
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      10286 39 +     36723 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
s Acinonyx_jubatus.LLWD01001279.1                           816833 36 +   1699592 cc-t---acc-tt--tt---------gg--ttca------g---gctg-------------tggtgctaa----tt-g-cca---
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 3
s Acomys_cahirinus.AcoCah_scaffold_21377                     29018 39 +     63021 tc-t---ata-tt--tt---------ca--tcaa------a---gctt-------------tgctaccat----g-tt-atgttg
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419289 38 +  29979442 cc-t---acc-tt--tt---------gg--ttca------a---gctc-------------tggtactaa----tt-g-gcagt-
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 I 4
s Ailurus_fulgens.LNAC01001112.1                            219296 38 +    347723 cc-t---acc-tt--tt---------gg--ttca------a---gctt-------------tggtagtaa----tt-g-acagt-
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 4
s Allactaga_bullata.AllBul_scaffold_20030                    21793 41 -     61208 TC-T---TTG-TTTTTT---------CA--TTCA------A---GCTC-------------TGTTGCTAA----T-TT-GTGTTG
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 6
s Allenopithecus_nigroviridis.k141_3755588                   51239 39 +     53615 CC-TACA----TT--TT---------CA--TTTG------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3267 39 +     13857 cc-tgca----tt--tt---------ca--ttcg------a---gaac-------------tggtactag----tt-t-gtgttg
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19823 39 -     21945 cc-tgca----tt--tt---------ca--ttcg------a---gaac-------------tggtactag----tt-t-gtgttg
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21508 39 +     32033 cc-tgca----tt--tt---------ca--ttcg------a---gaac-------------tggtactag----tt-c-gtgttg
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74763 37 -     84148 CC-TACA----TT--TT---------CA--T--A------A---GAAC-------------TGATACTGG----TT-T-GTGTCG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               47017 37 -     78289 CC-TACA----TT--TT---------CA--T--A------A---GAAC-------------TGATACTGG----TT-T-GTGTCG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46433 37 +     55831 CC-TACA----TT--TT---------CA--T--A------A---GAAC-------------TGATACTGG----TT-T-GTGTCG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44895 37 -     64179 CC-TACA----TT--TT---------CG--T--A------A---GAAC-------------TGATACTGG----TT-T-GTGTCG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           1998 37 -      3959 CC-TACA----TT--TT---------CA--T--A------A---GAAC-------------TGATACTGG----TT-T-GTGTCG
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43520 37 +     45454 CC-TACA----TT--TT---------CA--T--A------A---GAAC-------------TGATACTGG----TT-T-GTGTCG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              49169 37 +     70886 CC-TACA----TT--TT---------CA--T--A------A---GAAC-------------TGATACTGG----TT-T-GTGTTG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11339 37 +     30854 CC-TACA----TT--TT---------CA--T--A------A---GAAC-------------TGATACTGG----TT-T-CTGTCG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35475 37 +     42133 CC-TACA----TT--TT---------CG--T--A------A---GAAC-------------TGATACTGG----TT-T-GTGTCG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592495 39 +   2318259 cc-t---aca-tt--tt---------aa--ctca------a---ggtc-------------tggtactaa----tt-t-gcagtg
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180899 39 -    412891 tt-t---aca-tt--tt---------aa--ttca------a---gctc-------------cgttactaa----tt-t-gtggtg
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53649 39 -     68529 cc-t---aca-tt--tt---------aa--ctca------a---ggtc-------------tggtactaa----tt-t-gcggtg
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3680 39 +     17741 CC-TACG----TT--TT---------CA--TTCA------G---GAAC-------------TGATACTAA----TT-T-GTGTTG
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4305 39 -     15923 CC-TACA----TT--TT---------CA--TTCA------G---GAAC-------------TGATACTAA----TT-T-GTGTTG
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674587 39 +   5030052 CC-TACA----TT--TT---------CA--TTCA------G---GAAC-------------TGGTACTAA----TT-T-GTGTTG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4581 39 -     16391 CC-TACA----TT--TT---------CA--TTCA------G---GAAC-------------TGATACTAA----TT-T-GTGTTG
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               4140 39 -     17186 CC-TACA----TT--TT---------CA--TTCA------G---GAAC-------------TGATACTAA----TT-T-GTGTTG
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27746 38 -     32367 C--T---ACA-tt--tt---------ca--ttca------a---gctc-------------tagtactaa----c--tagtgttg
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9404 39 -     15198 tt-t---aca-tt--tt---------aa--ttca------a---gctc-------------cagtactaa----tt-t-gcggtg
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               277238 37 +  21539123 CC-TACA----TT--TT---------CA--T--A------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13403 37 +     48076 CC-TACA----TT--TT---------GA--T--A------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8539 37 -     28759 CC-TACA----TT--TT---------GA--T--A------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              36095 37 +     44353 CC-TACA----TT--TT---------CA--T--A------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51465 37 -     71267 CC-TACA----TT--TT---------GA--T--A------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25523 37 -     33135 CC-TACA----TT--TT---------GA--T--A------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7967146 39 -  23207421 cc-t---aca-tt--tt---------aa--ctca------a---gctc-------------tggtactaa----tt-t-gcggtg
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3647 39 -     25979 cc-t---aca-tt--tt---------aa--ctca------a---gctc-------------tggtactaa----tt-t-gcggtg
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93482 39 +    124022 cc-t---aca-tt--tt---------aa--ctca------a---ggtc-------------tggtactaa----tt-t-gcagtg
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36671 39 +    288883 cc-t---aca-tt--tt---------aa--ctca------g---ggtc-------------tggtactaa----tt-t-gcagtg
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423824 39 -  48749331 cc-t---aca-tt--tt---------aa--ctna------g---ggtc-------------tggtactaa----tt-t-gcagtg
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      769425 39 +   1948126 cc-t---aca-tt--tt---------aa--ctca------g---ggtc-------------tggtactaa----tt-t-gcagtg
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27559970 39 -  45695690 cc-t---aca-tt--tt---------aa--ctga------g---ggtc-------------tggtactaa----tt-t-gcagtg
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536651 39 -   4408762 cc-t---aca-tt--tt---------aa--ctca------c---ggtc-------------tggtactaa----tt-t-gcagtg
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                  10317 39 +     28062 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTCG----TT-T-GTGTTG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45608 39 -     91139 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTCG----TT-T-GTGTTG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  23135 39 +     95584 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTCG----TT-T-GTGTTG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         23048 39 +    119600 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tgatactcg----tt-t-gtgttg
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12670 39 +     18648 CT-GACA----TT--TT---------CT--TTCA------A---GAAC-------------TGATACTAC----TT-T-GTGCTG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             12173 39 -     13885 CT-GACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            4384 39 -      8861 CT-GACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGCTG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456726 39 + 189096842 CT-GACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGCTG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               4300 39 +      8664 CT-GACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGCTG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7635190 39 +  17673402 cc-t---aca-tt--tt---------ag--ttta------a---gctc-------------tggtactaa----tt-t-gcagtg
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4669491 39 +   7040546 cc-t---aca-tt--tt---------ag--ttta------a---gctc-------------tggtactaa----tt-t-gcagtg
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1213189 39 +   1652518 cc-t---aca-tt--tt---------ag--ttta------a---gctc-------------tggtactaa----tt-t-gcagtg
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42509228 38 +  60362399 cc-t---acc-tt--tt---------gg--ttca------a---gctc-------------tggtactaa----ta-g-acagt-
i CanFam4.chr16                                          C 0 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12863 38 -     23171 cc-t---acc-tt--tt---------gg--ttca------a---gctc-------------tggtactaa----ta-g-acagt-
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 I 4
s Canis_lupus_dingo.QKWQ01000480.1                          226204 38 +   9314153 cc-t---acc-tt--tt---------gg--ttca------a---gctc-------------tggtactaa----ta-g-acagt-
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 I 4
s Canis_lupus_familiaris.chr16                            41619341 38 +  59632846 cc-t---acc-tt--tt---------gg--ttca------a---gctc-------------tggtactaa----ta-g-acagt-
i Canis_lupus_familiaris.chr16                           C 0 I 4
s Canis_lupus_orion.HG994398.1                            45110922 38 -  63665305 cc-t---acc-tt--tt---------gg--ttca------a---gctc-------------tggtactaa----ta-g-acagt-
i Canis_lupus_orion.HG994398.1                           C 0 I 4
s Capra_aegagrus.CM003241.1                               27416499 39 -  46296322 cc-t---aca-tt--tt---------aa--ctca------a---ggtc-------------tggtactaa----tt-t-gcagtg
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598496 39 +  44709034 cc-t---aca-tt--tt---------aa--ctca------a---ggtc-------------tggtactaa----tt-t-gcagtg
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2410 33 -     20114 -----------tt--ta---------ca--ttca------a---actc-------------aggtaccaa----t-tt-ttatta
i Capromys_pilorides.CapPil_scaffold_26391               I 12 C 0
s Carlito_syrichta.NW_007259797.1                           274682 31 +    496798 CC-TGAA----TT--TT---------CA--TTCA------A---GCTC-------------TGGTACTGA----G----------
i Carlito_syrichta.NW_007259797.1                        C 0 I 4
s Carollia_perspicillata.CarPer_scaffold_107871               4288 39 +      9923 tt-t---aca-tt--tt---------aa--ttca------a---gctc-------------cggtactaa----tt-t-gcggtg
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31780 39 -     39886 cc-t---ata-tt--tt---------ca--ttta------a---gctc-------------ctacattaa----c-tt-gtgttg
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83499 39 -    217609 ct-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggcactag----tt-t-gcagtg
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_porcellus.DS562891.1                               5003809 33 +  23407841 -----------tt--tt---------aa--ttca------a---actc-------------tagtactaa----t-tt-gtgttg
i Cavia_porcellus.DS562891.1                             I 17 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          694 33 -    143979 -----------tt--tt---------aa--ttca------a---actc-------------tagtactaa----t-tt-gtgttg
i Cavia_tschudii.CavTsc_scaffold_8919                    I 17 C 0
s Cebuella_niveiventris.k141_592277                           7641 39 -     12580 CT-CACA----TT--TT---------CT--TTCA------A---GAAC-------------TGATACTAC----TT-T-GTGCTG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45750 39 +     53515 CT-GACA----TT--TT---------CT--TTCA------A---GAAC-------------TGATACTAC----TT-T-GTGCTG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376377 39 -  26074798 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10446 39 -     34880 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69544 39 -     89041 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tgatactag----tt-t-gtgttg
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2345 31 -     76265 cc-tgaa----tt--tt---------ca--ttca------a---gctc-------------tggtactga----g----------
i Cephalopachus_bancanus.k141_1140705                    C 0 I 4
s Ceratotherium_simum.JH767749.1                          15496046 39 -  27778364 cc-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggtactgc----tt-t-gcagtg
i Ceratotherium_simum.JH767749.1                         I 225 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22877 39 +     27315 cc-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggtactgc----tt-t-gcagtg
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      I 223 C 0
s Cercocebus_atys.KQ010504.1                                144323 39 -   4669795 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                          297 39 +      3297 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3495 39 -     14410 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47877 39 -    148725 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        30154 39 -     40656 CC-TACA----TT--TT---------CA--TTTG------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                          10113 39 +     20796 CC-TACA----TT--TT---------CA--TTCG------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            15227 39 -     17524 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30960 39 -     34525 CC-TACA----TT--TT---------CA--TTCG------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14738 39 -     25376 CC-TACA----TT--TT---------CA--TTCG------A---GAAC-------------TGGTACTAG----TT-T-GTATTG
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367327 39 -  39242232 cc-taca----tt--tt---------ca--ttcg------a---gaac-------------tggtactag----tt-t-gtgttg
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  273052 39 +  21565898 cc-taca----tt--tt---------ca--ttcg------a---gaac-------------tggtactag----tt-t-gtgttg
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35419 39 -     45857 cc-taca----tt--tt---------ca--ttcg------a---gaac-------------tggtactag----tt-t-gtgttg
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30320 39 -     32606 CC-TACA----TT--TT---------CA--TTTG------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6475 39 +      8499 CC-TACA----TT--TT---------CA--TTCG------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28880 39 +     70610 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25842 39 +     36323 CC-TACA----TT--TA---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15723 39 -     19938 cc-c---aca-ct--tt---------ca--ctga------a---gctc-------------tggtactaa----tt-t-gcggtg
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        I 2 C 0
s Cheracebus_lucifer.k141_2312002                            11411 38 -     32913 CC-TACA----TT--TT---------CA--TTCA------A---GAAC--------------GATACTAG----TT-T-GTGTTG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21824 38 -     40346 CC-TACA----TT--TT---------CA--TTCA------A---GAAC--------------GATACTAG----TT-T-GTGTTG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             22078 38 +    216457 CC-TACA----TT--TT---------CA--TTCA------A---GAAC--------------GATACTAG----TT-T-GTGTTG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21868 38 +     39636 CC-TACA----TT--TT---------CA--TTCA------A---GAAC--------------GATACTAG----TT-T-GTGTTG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33958 39 -     52013 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------CGATACTAG----TT-T-GTGTTG
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44948 39 -    112038 CC-CACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10498 39 +     34062 CC-CACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346742 39 +  18827391 cc-tgca----tt--tt---------ca--ttcg------a---gaac-------------tggtactag----tt-t-gtgttg
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13281 39 -     44032 cc-tgca----tt--tt---------ca--tttg------a---gaac-------------tggtactag----tt-t-gtgttg
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            308128 39 - 135778131 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2425 38 +     10270 tc-t---aca-tt--tt---------ca--ttca------a---g-tt-------------tggtactaa----tt-t-ttggca
i Choloepus_didactylus.ChoDid_scaffold_147047            I 2 C 0
s Choloepus_hoffmanni.KN194906.1                            609902 38 -    839153 tc-t---aca-tt--tt---------ca--ttca------a---g-tt-------------tggtactaa----tt-t-ttggca
i Choloepus_hoffmanni.KN194906.1                         I 2 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2646 38 -      4087 cc-t---aca-tt--tt---------ta--ct-a------a---gctc-------------ttaaactaa----tt-t-gtggtg
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412536 39 -   2368649 CC-TACG----TT--TT---------CA--TCCA------A---GAAC-------------TGGTACTAG----TT-G-GTGTTG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382418 39 - 200372422 cc-tacg----tt--tt---------ca--tcca------a---gaac-------------tggtactag----tt-g-gtgttg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               5971 39 -     84244 cc-tacg----tt--tt---------ca--tcca------a---gaac-------------tggtactag----tt-g-gtgttg
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35811000 37 +  53390261 CC-T---GTA-T---TA---------AA--TTCA------A---GCTC-------------TGGTACA-A----TT-T-GTGGCA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6569 20 -      8242 CT-T---ACA-TT--TT---------AA--TTCA------A---GCT--------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_14425                 47711 38 -     83289 tc-c---ata-tt--tt---------ca--ttga------a---aatt-------------tgctatcaa----g-tc-at-ttg
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213119231 39 - 224834208 cc-t---ata-tt--tt---------ta--tcaa------a---actt-------------tgctaccaa----g-tc-atgttg
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_205242               151 37 +      5812 -c-t---gca-tt--ta---------aa--ctta------a---actc-------------tgctatg-a----tt-t-ctggta
i Crocidura_indochinensis.CroInd_scaffold_205242         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              8171 39 +     87169 cc-t---acc-tt--tt---------gg--ttca------attgactg-------------tggtgctaa----tt-g-gca---
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 3
s Ctenodactylus_gundi.CteGun_scaffold_65                    650449 29 -   1526836 cc-t---aca-ct--tt---------ta--ttca------a---tctc-------------tggtactt----------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 I 5
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  23080 33 +     50838 -----------tt--tt---------ca--ttca------a---attc-------------tggtactaa----t-at-gtgtta
i Ctenomys_sociabilis.CteSoc_scaffold_30159              I 11 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12571 33 +     36344 -----------tt--tt---------ta--ttca------a---actc-------------tggtactaa----t-tt-gtgttg
i Cuniculus_paca.CunPac_flattened_line_7025              I 12 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            32012 33 +     75252 -----------tt--tt---------ta--ttca------a---actc-------------tggtactaa----t-tt-gtgttt
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 12 C 0
s Dasypus_novemcinctus.JH564415.1                          2113468 38 -   2246927 c--c---act-gt--tc---------ta--ctcc------a---gctc-------------tgcttctac----tt-c-acggtg
i Dasypus_novemcinctus.JH564415.1                        I 2 C 0
s Delphinapterus_leucas.KZ290073.1                        18635558 39 -  35494412 cc-t---aca-tt--tt---------aa--ctca------a---gctc-------------tggtactaa----tt-t-gcagtg
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11869281 39 -  20541912 tt-t---aca-tt--tt---------aa--tcca------a---gctc-------------cggtactaa----gc-t-tggctg
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668316 39 -   1390856 cc-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggtactac----tt-t-gcagtg
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 224 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  143115 39 -    198055 cc-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggtactgc----tt-t-gcagtg
i Diceros_bicornis.DicBicMic_scaffold_5955               I 218 C 0
s Dipodomys_ordii.KN672350.1                              18955819 39 -  37912305 cc-t---aca-tt--tt---------ca--ttca------a---gcac-------------ttgtactca----t-tt-gtgttg
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                   1423 39 +     14058 cc-t---aca-tc--tt---------ca--ttca------a---gcac-------------ttgtactca----t-tt-gtgttg
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_80628                 13138 33 +     14636 -----------tt--tt---------ca--ttca------a---actc-------------tggtactaa----t-tt-gtgttg
i Dolichotis_patagonum.DolPat_scaffold_80628             I 117 n 45
s Echinops_telfairi.JH980293.1                            62858777 38 - 111700974 cc-a---aca-tt--tt---------ca--cc-a------a---tttc-------------tggtactga----tt-t-gtgctg
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                               9966 39 +     19438 tt-t---acg-tt--tt---------aa--ttca------g---gctc-------------tgggactaa----tc-t-gcagta
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       246285 39 -    607251 tc-t---aca-tt--tg---------aa--ctcc------a---ggtc-------------tggtactaa----tt-t-gcagtg
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Elephantulus_edwardii.JH947257.1                         9114121 17 -  10337057 CC-T---GTG-TT--TT---------TC--ct-g------a---a----------------------------------------
i Elephantulus_edwardii.JH947257.1                       I 22 I 13034
s Ellobius_lutescens.LOEQ01008920.1                          35439 19 +    110024 -----------------------------------------------T-------------TGCAACCAA----G-TC-ATGTTG
i Ellobius_lutescens.LOEQ01008920.1                      I 7 C 0
s Ellobius_talpinus.LOJH01026522.1                           17360 19 +     18970 -----------------------------------------------T-------------TGGTACCAA----G-TC-ATGTTG
i Ellobius_talpinus.LOJH01026522.1                       I 7 C 0
s Enhydra_lutris.KZ291758.1                               24925819 38 +  41312741 cc-t---acc-tt--tt---------gg--ttca------a---gctc-------------tggtactaa----tt-g-gcaat-
i Enhydra_lutris.KZ291758.1                              C 0 I 4
s Eptesicus_fuscus.JH977646.1                             12583051 39 +  14770903 tt-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggtacgaa----tt-t-gtggtg
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045559 39 -   4378816 cc-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggtactac----tt-t-gcagtg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379489 39 +  39960074 cc-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggtactac----tt-t-gcagtg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415471 39 -    498745 cc-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggtactac----tt-t-gcagtg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671763 14 +   7059049 ----------------------------------------------------------------AATA-G----TT-T-ATGGTG
i Erinaceus_europaeus.JH835339.1                         I 6 C 0
s Erythrocebus_patas.Contig38                               266270 39 +  21539334 cc-tgca----tt--tt---------ca--ttcg------a---gaac-------------tggtactag----tt-t-gtgttg
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74761 39 -    133382 cc-t---aca-tt--tt---------aa--ctca------a---gctc-------------tggtactaa----tt-t-gcggtg
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2483 39 +     25849 cc-t---aca-tt--tt---------aa--ctca------a---gctc-------------tggtactaa----tc-t-gcggtg
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250911 36 - 206538554 cc-t---acc-tt--tt---------gg--ttca------g---gctg-------------tggtgctaa----tt-g-cca---
i Felis_catus.CM001381.2                                 C 0 I 3
s Felis_catus_fca126.CM031415.1                          185120867 36 - 205367284 CC-T---ACC-TT--TT---------GG--TTCA------G---GCTG-------------TGGTGCTAA----TT-G-CCA---
i Felis_catus_fca126.CM031415.1                          C 0 I 3
s Felis_nigripes.FelNig_flattened_line_44075                  1508 36 +     25330 CC-T---ACC-TT--TT---------GG--TTCA------G---GCTG-------------TGGTGCTAA----TT-G-CCA---
i Felis_nigripes.FelNig_flattened_line_44075             C 0 I 3
s Fukomys_damarensis.KN121974.1                            2926369 27 -   3816255 ------------------------------TTCA------A---ATGG-------------TGGTACTAA----T-TT-GTGTTA
i Fukomys_damarensis.KN121974.1                          I 10 I 643
s Galeopterus_variegatus.GalVar_scaffold_51812                5354 39 -     28519 cc-t---aca-tt--tt---------ta--ttca------a---gctc-------------tggtacaag----tt-t-gtgtta
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2543 39 +    660261 cc-t---aca-tt--tt---------aa--ctca------a---ggtc-------------tggtactaa----tt-t-gcagtg
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            5360 39 -      6791 t--g----ctatt--tt---------catattcc------a---gctc-------------tggtactaa----t--t-gtgttg
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_935316                                1369 39 +     34797 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Gorilla_beringei.k141_935316                           C 0 I 41
s Gorilla_gorilla.LT578336.1                                 75956 43 +  33314783 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tggtactagtttgtt-t-gtgttg
i Gorilla_gorilla.LT578336.1                             C 0 I 41
s Graphiurus_murinus.GraMur_scaffold_10447                    7286 37 -     78134 c--a----ctatc--tt---------ca--ttcc------a---gctc-------------tagtactaa----t--t-gtgttg
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 13
s Helogale_parvula.HelPar_flattened_line_2585                34534 36 -    327341 cc-t---acc-gt--tt---------gg--tcca------a---gctc-------------tggtgctaa----tt-g-tca---
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 3
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 16209 39 +     48891 cc-t---aca-tt--tt---------aa--ctca------a---ggtc-------------tggtactaa----tt-t-gcagtg
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1938811 33 -  22651954 -----------TG--TT---------CA--TTCA------A---ACTC-------------TGGTACAAA----T-TT-GTGTTG
i Heterocephalus_glaber.JH602082.1                       I 12 I 644
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6507 38 +      8654 cc-t---aga-gt--tt---------ta--ct-g------t---gctg-------------tggtactaa----tt-t-gtgatg
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11596 39 -     36432 cc-t---aca-tt--tt---------ta--ctca------a---actc-------------tagtactaa----tt-t-gtggtg
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                361 35 -      8370 ct-t---aca-tt--tt---------aa--ttct------a---gctc-------------tggtactaa----tt-t-gt----
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145927 39 -    630532 CC-TACA----TT--TC---------CA--TTCA------A---GAAC-------------TGGTGCTAG----TT-T-GTGTTG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  74206 36 +     83186 cc-t---acc-tt--tt---------gg--ttca------a---gctg-------------tggtgctaa----tt-g-gca---
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 3
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75748 33 +    143317 -----------tt--tt---------ta--ttca------a---actc-------------tagtactaa----t-tt-gtgttg
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 12 C 0
s Hylobates_agilis.k141_1155965                               8974 37 +     12352 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGG--CTAG----TT-T-GTGTTG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              16161 37 +     55766 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGG--CTAG----TT-T-GTGTTG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055689 39 + 191637585 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-TTGTTG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804567 39 +  11177569 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-TTGTTG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11607 39 -    135385 cc-t---aca-tt--tt---------ca--ctca------a---gctc-------------tggtactaa----t-tt-gtgttg
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390858 38 +   7955117 c--t---aca-tt--tt---------ca--ttca------a---actc-------------tggtactaa----t--tggtgttg
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13662 39 -     16823 cc-t---gca-tt--tt---------aa--ctca------a---gttc-------------tggtactaa----tt-t-gcggtg
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1243341 40 +   9596543 tc-t---tta-tt-ttt---------ca--ttta------a---gctC-------------TGTTACTAA----T-TC-ATGTTG
i Jaculus_jaculus.JH725527.1                             C 0 I 8
s Kogia_breviceps.KogBre_flattened_line_3970                 75500 39 -     97402 cc-t---aca-tt--tt---------aa--ctca------a---gctc-------------tggtactaa----tt-t-gcggtg
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45785 37 +    110728 CC-TACA----TT--TT---------CA--T--A------A---GAAC-------------TGATACGAG----TT-T-GTGTTG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    36461 39 -     49555 tt-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggtacgaa----tt-t-gtgggg
i Lasiurus_borealis.LasBor_scaffold_26245                I 282 I 41
s Leontocebus_fuscicollis.k141_3470480                        1229 39 -     23187 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1543 39 -     14280 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                        1183 39 +      3713 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1369 39 +      8855 CT-GACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         6170 39 -     13645 CT-GACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        817091 38 -   3914936 cc-t---acc-tt--tt---------gt--ttca------a---gctc-------------tggtactaa----tt-g-gcagt-
i Leptonychotes_weddellii.KB714746.1                     C 0 I 4
s Lepus_americanus.LepAme_scaffold_56121                     23362 33 +     24238 -----------tt--tt---------ca--ttca------a---gctc-------------tggtgctaa----t-tt-gtattg
i Lepus_americanus.LepAme_scaffold_56121                 I 6 C 0
s Lipotes_vexillifer.KE559953.1                             344844 39 +    662738 cc-t---aca-tt--tt---------aa--ctca------a---gctc-------------tggtactaa----tt-t-gcggtg
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               337200 39 -   1826925 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39088248 38 +  43346337 cc-t---aca-tt--tt---------ca--ct-a------c---attc-------------tggtgctaa----tt-t-gtggta
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618496 38 +  59628241 cc-t---acc-tt--tt---------gg--ttca------a---gctc-------------tggtactaa----ta-g-acagt-
i Lycaon_pictus.CM007581.1                               C 0 I 4
s Macaca_arctoides.k141_1757516                              48597 39 -     61512 cc-taca----tt--tt---------ca--ttca------a---gagc-------------tggtactag----tt-t-gtgttg
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 376259 39 -  60120075 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28527 39 +     30207 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3365 39 -      5035 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28480 39 +     30527 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39656 39 -     50087 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49401 39 +     51645 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418603 39 - 187317192 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402834 39 +  25927173 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  52005 39 -     62418 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4536 39 +     14901 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48478 39 +     59329 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274385 39 +    668171 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  3017 39 -      5049 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 6184 39 +     17132 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226939 39 -    270270 tt-t---aca-tt--tt---------aa--ttca------g---gctc-------------tgggactaa----tc-t-gtagtt
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325667 39 +  24302211 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360498 39 -    752769 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             677117 39 -    737560 ac-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggcactga----tt-t-atagtg
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                             224411 39 +    317179 ac-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggcactaa----tt-t-atagtg
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                           7505058 38 +  40650429 c--t---aca-tt--tt---------ca--ttca------a---gctc-------------tggtactaa----t--tggtgttg
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       154265 35 +    207569 ct-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggtcctaa----tt-t-gt----
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29831 38 -     74585 cc-t---acc-tt--tt---------gt--ttca------a---gctc-------------tggtgctaa----tt-g-gcaat-
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 I 4
s Meriones_unguiculatus.MerUng_scaffold_7390                 53414 39 -    140813 TC-T---ATA-TT--TT---------CA--TCGA------A---GCTT-------------GGCTACCAA----G-TC-GTATTA
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17433525 39 +  29670104 CC-T---GTA-TT--TT---------TA--TCAA------A---GCTT-------------TGCTACCAA----G-TC-ATATTG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     91127 39 +     93471 cc-t---aca-tt--tt---------aa--ctca------a---gctc-------------tggtactaa----tt-t-gcggtg
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12779 39 +     17804 CT-GACA----TT--TT---------CT--TTCA------A---GAAC-------------TGATACTAC----TT-T-GTGCTG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                506 39 +      5551 CT-GACA----TT--TT---------CT--TTCA------A---GAAC-------------TGATACTAC----TT-T-GTGCTG
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21590 39 -     26561 CT-GACA----TT--TT---------CT--TTCA------A---GAAC-------------TGATACTAC----TT-T-GTGCTG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49958 38 +    145209 tc-t---aca-tt--tg---------ca--ca-c------a---tttc-------------tggtgctga----tt-t-gtgctg
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188860 39 +    200668 ta-t---aca-tt--tt---------aa--ttca------a---gctc-------------caggactaa----tt-t-gtggtg
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966847 19 +  27267610 -----------------------------------------------T-------------TGCTACCAA----G-TC-ATGTTG
i Microtus_ochrogaster.CM001695.1                        I 7 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368680 39 -   8254450 tt-t---aca-tt--tt---------aa--ttca------a---gctc-------------tgctactaa----tt-t-gcggtg
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46411 39 -     48117 tt-t---aca-tt--tt---------aa--ttca------a---gctc-------------tgctactaa----tt-t-gcggtg
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25766 39 -     27822 CC-TACA----TT--TT---------CA--TTCG------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12324 38 +     27589 cc-t---acc-tt--tt---------gt--ttca------a---gctc-------------tggtactaa----tt-g-gcagt-
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 I 4
s Monodon_monoceros.MonMon_M_scaffold_103                   363236 39 +    437263 cc-t---aca-tt--tt---------aa--ctca------a---gctc-------------tggtactaa----tt-t-gcagtg
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183305 48 +    366855 tc-t---aca-tt--ttagctacattaa--ttca------a---gctc-------------tggcactaa----tt-t-gcagtg
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32441 39 -     82753 cc-t---aca-tt--tt---------aa--ctca------a---ggtc-------------tggtactaa----tt-t-gcagta
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   22293 36 -     63510 cc-t---acc-tt--tt---------gg--tcca------a---gctc-------------tggtgctaa----tt-g-gcA---
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 3
s Murina_feae.MurFea_scaffold_17764                          45667 39 +     47283 tt-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggtatgaa----tt-t-gtggtg
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35598267 19 + 120012414 -----------------------------------------------T-------------TGCTACCAA----G-TC-ATATGG
i Mus_caroli.LT608237.1                                  I 8 C 0
s Mus_musculus.chr8                                       41691583 19 + 129401213 -----------------------------------------------T-------------TGTTACCAA----G-TC-ATATTG
i Mus_musculus.chr8                                      I 8 C 0
s Mus_pahari.LT608297.1                                   58219543 19 +  89631738 -----------------------------------------------T-------------TGCTACCAA----G-TC-AGATTG
i Mus_pahari.LT608297.1                                  I 8 C 0
s Mus_spretus.CM004101.1                                  39500502 19 + 130317789 -----------------------------------------------T-------------TGTTACCAA----G-TC-ATATTG
i Mus_spretus.CM004101.1                                 I 8 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3372 37 -    124358 c--a----ctatt--tt---------ca--ttct------a---gctc-------------cgatacaaa----t--t-gtgttg
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358781 38 +  14710649 tc-t---acc-tt--tt---------gg--ttca------a---gctc-------------tggtactaa----tt-g-gcaat-
i Mustela_putorius.JH418006.1                            C 0 I 4
s Myocastor_coypus.MyoCoy_scaffold_57531                      1467 33 -     27262 -----------TT--TT---------TG--TTCA------A---ACTC-------------TCATACTAA----T-TT-TTGTTA
i Myocastor_coypus.MyoCoy_scaffold_57531                 I 12 C 0
s Myotis_brandtii.KE162005.1                               9797672 39 +  10118263 tt-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggtacgaa----tt-t-gtggtg
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391846 39 +   6019432 tt-t---aca-tt--tt---------aa--ttca------a---gttc-------------tggtacgaa----tt-t-gtggtg
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387885 39 +   4330536 tt-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggtacgaa----tt-t-gtggtg
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6672 39 +     18357 tt-t---aca-tt--tt---------aa--ttta------a---gctc-------------tggtacgaa----tt-t-gtggtg
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950442 39 +   3037898 tc-t---aca-tt--tt---------ta--ttca------t---gctc-------------tgttaccaa----t-tc-atgttg
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              32546 39 +     34575 CC-TACG----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTGG----TT-T-GTGTTG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469771 38 -  31847680 cc-t---acc-tt--tt---------gt--ttca------a---gctc-------------tggtactaa----tt-g-gcagt-
i Neomonachus_schauinslandi.NINY01007730.1               C 0 I 4
s Neophocaena_asiaeorientalis.KZ687982.1                   1235894 39 -   7148211 cc-t---aca-tt--tt---------aa--ctca------a---gctc-------------tggtactaa----tt-t-gtggtg
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131585 39 -    149072 tt-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggtactaa----tt-t-gtggtg
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56862 39 -    132029 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-TTGTTG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12957 39 -     16345 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-TTGTTG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18846 39 +     22201 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-TTGTTG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8417076 39 -  22158432 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-TTGTTG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29251 39 -     54323 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-TTGTTG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                202201 38 +   9404916 cc-t---acc-tt--tt---------gg--ttca------g---gctc-------------tggcactaa----ta-g-gcagt-
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 I 4
s Octodon_degus.JH651603.1                                11059741 33 -  11899542 -----------tt--tt---------ca--ttta------a---actt-------------tggtattaa----t-ta-gtgcta
i Octodon_degus.JH651603.1                               I 12 C 0
s Odobenus_rosmarus.KB229312.1                             1455540 38 +   2017862 cc-t---acc-tt--tt---------gg--ttca------a---gctc-------------tggtactaa----tt-g-gcagt-
i Odobenus_rosmarus.KB229312.1                           C 0 I 4
s Odocoileus_virginianus.KZ100018.1                         442837 39 -    630418 cc-t---aca-tt--tt---------aa--ctca------a---ggtc-------------tggtactaa----tt-t-gcagtg
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22494 39 +    150152 cc-t---aca-tt--tt---------aa--ctca------a---ggtc-------------tggtactaa----tt-t-gcagtg
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97463 32 -    140218 -----------------------------------------------tttcactgaaactttgctaccaa----g-tc-atgttg
i Ondatra_zibethicus.OndZib_scaffold_7387                I 7 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    8028 39 -     41509 CA-T---ATA-TT--TC---------CA--TTGA------A---GCTT-------------TGCTACCAA----G-AC-ATGTTG
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8106307 39 +  10937097 cc-t---aca-tt--tt---------aa--ctca------a---gctc-------------tggtactaa----tt-t-gcggtg
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3296 38 +     11607 tc-t---atg-tg--tc---------ta--ct-a------a---gctc-------------tcgtactaa----tg-t-gtggtg
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107109651 33 - 174332312 -----------tt--tt---------ca--ttca------a---gctc-------------tggtgctaa----t-tt-gtattg
i Oryctolagus_cuniculus.CM000791.1                       I 6 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        43363 38 +    559221 CC-T---ACC-TT--TT---------GG--TTCA------A---GCTC-------------TGGTACTAA----TA-G-GCAGT-
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 I 4
s Ovis_aries.CM001607.2                                   26411235 39 -  44047080 cc-t---aca-tt--tt---------aa--ctca------a---ggtc-------------tggtactaa----tt-t-gcagtg
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11858 39 +     17875 cc-t---aca-tt--tt---------aa--ctca------a---ggtc-------------tggtactaa----tt-t-gcagtg
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02004363.1                                  850 39 +      1263 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Pan_paniscus.AJFE02004363.1                            C 0 I 76
s Pan_troglodytes.NBAG03003091.1                             17250 40 -     26668 CCCTACG----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAA----TT-T-GTGTTG
i Pan_troglodytes.NBAG03003091.1                         C 0 n 0
s Panthera_onca.PanOnc_flattened_line_3271                   28841 36 -    230217 CC-T---ACC-TT--TT---------GG--TTCA------G---GCTG-------------TGGTGCTAA----TT-G-CCA---
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 3
s Panthera_pardus.KV860321.1                              18466082 36 -  18783137 cc-t---acc-tt--tt---------gg--ttca------g---gctg-------------tggtgctaa----tt-g-cca---
i Panthera_pardus.KV860321.1                             C 0 I 3
s Panthera_tigris.KE722367.1                               3976681 36 +   8748460 cc-t---acc-tt--tt---------gg--ttca------g---gctg-------------tggtgctaa----tt-g-cca---
i Panthera_tigris.KE722367.1                             C 0 I 3
s Pantholops_hodgsonii.KE114653.1                          1622754 39 +   2937107 cc-t---aca-tt--tt---------aa--ctca------a---ggtc-------------tggtactaa----tt-t-gcagtg
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246682 39 - 183742232 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            12967 39 +     21308 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295710 39 -  20919399 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25609 39 -     27687 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2286 39 +     10553 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  2247 39 -     10386 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18961 35 +     78924 CC-T----AC-TT--TT---------GG--TTCA------A---GCTG-------------TGGTGCTAA----TT-G-GCA---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 3
s Perognathus_longimembris.PerPac_flattened_line_89005        7928 39 +      9367 cc-t---aca-tt--tt---------ca--ctca------a---gcat-------------ctgtactca----t-tt-gtgttg
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         251180 39 +  18517816 tg-t---ata-tt--tc---------ca--ttga------a---gctt-------------tgctaccaa----g-tc-atgttg
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_17301                     35732 33 -     56120 -----------TT--TT---------CA--TTC------CA---GCTC-------------TGGTACTTA----T-TT-GTATCA
i Petromus_typicus.PetTyp_scaffold_17301                 I 12 N 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7828 39 -     63832 cc-t---aca-tt--tt---------aa--ctca------a---gctc-------------tagtactaa----tt-t-gtggtg
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5932 39 +     55023 cc-tacg----tt--tt---------ca--ttca------a---gagc-------------tggtactag----tt-g-gtgtta
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5455 39 -     89929 cc-tacg----tt--tt---------ca--ttca------a---gagc-------------tggtactag----tt-g-gtgttg
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            6043 39 +     40849 cc-tacg----tt--tt---------ca--ttca------a---gagc-------------tggtactag----tt-g-gtgttg
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257772 39 +  14605196 CC-TACG----TT--TT---------CA--TTCA------A---GAGC-------------TGGTACTAG----TT-G-GTGTTG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             8163 39 +     22231 tt-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggtacgaa----tt-t-gtggtg
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             67297 39 +    207309 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8392 39 -     25401 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               34138 39 +     58159 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34414 39 +     63561 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           34169 39 +     51148 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              559145 39 -   4542175 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           34153 39 +     51125 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            5076 39 +     19503 cc-t---aca-tt--tt---------aa--ctca------a---gctc-------------tggtactaa----tt-t-gtggtg
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10585 38 +     39866 CC-TACA----TT--TT---------CA--TTCA------A---GAAC--------------GATACTAG----TT-T-GTGTTG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5667 38 -      9282 CC-TACA----TT--TT---------AA--TTCA------A---GAAC--------------GATACTAG----TT-T-GTGTTG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       45071 38 -     87950 CC-TACA----TT--TT---------CA--TTCA------A---GAAC--------------GATACTAG----TT-T-GTGTTG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45465 38 -     88961 CC-TACA----TT--TT---------CA--TTCA------A---GAAC--------------GATACTAG----TT-T-GTGTTG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10163 38 -     39403 CC-TACA----TT--TT---------CA--TTCA------A---GAAC--------------GATACTAG----TT-T-GTGTTG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          45115 38 +     87928 CC-TACA----TT--TT---------CA--TTCA------A---GAAC--------------GATACTAG----TT-T-GTGTTG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         10162 38 -     60166 CC-TACA----TT--TT---------CA--TTCA------A---GAAC--------------GATACTAG----TT-T-GTGTTG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      17083 38 -     67232 CC-TACA----TT--TT---------CA--TTCA------A---GAAC--------------GATACTAG----TT-T-GTGTTG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          45015 38 -     90634 CC-TACA----TT--TT---------CA--TTAA------A---GAAC--------------GATACTAG----TT-T-GTGTTG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46482 38 +     89403 CC-TACA----TT--TT---------CA--TTCA------A---GAAC--------------GATACTAG----TT-T-GTGTTG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182619 39 - 189387572 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197361 39 -   9816681 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              31130 39 +     69807 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48313 39 -     80239 cc-tacg----tt--tt---------ca--ttga------a---gaac-------------tggtactag----tt-t-gtgttg
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 3039 38 -     12774 cc-t---aga-gt--tt---------ta--ct-g------t---gctg-------------tggtactaa----tt-t-gtgatg
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Psammomys_obesus.NESX01036366.1                            40947 39 +     52041 tc-t---ata-tt--tt---------ca--tcga------a---gctt-------------ggctaccaa----g-tc-atatta
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55944 39 -     66298 tt-t---aca-tt--tt---------aa--ttca------a---gctc-------------tggcactaa----tt-t-gcggtg
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8316 38 -     18639 cc-t---acc-tt--tt---------gg--ttca------a---gctc-------------tggtactaa----tt-g-gcaat-
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 I 4
s Pteropus_alecto.KB030862.1                               5844514 39 -  28871421 tt-t---aca-tt--tt---------aa--ttca------g---gctg-------------tgggactaa----tc-t-gcagta
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3541030 39 -   4952924 tt-t---acg-tt--tt---------aa--ttca------g---gctc-------------tgggactaa----tc-t-gcagta
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18103074 36 +  38429054 cc-t---acc-tt--tt---------gg--ttca------g---gctg-------------tggtgctaa----tt-g-cca---
i Puma_concolor.QAVW01001104.1                           C 0 I 3
s Pygathrix_cinerea.k141_1153803                             30499 39 +     91421 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  157050 39 -   7812017 cc-tccg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11350 39 +     72585 cc-tccg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5355 39 -     55207 cc-t---aca-tt--tt---------aa--ctca------a---ggtc-------------tggtactaa----tt-t-gcagtg
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37026156 19 -  90668790 -----------------------------------------------t-------------tgCTATCAA----G-TC-ATATTG
i Rattus_norvegicus.chr16                                I 8 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918413 35 +   3329780 ca-t---aca-tt--tt---------aa--ttca------a---gttc-------------tggtactaa----tt-t-gt----
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4956 39 +      7119 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125626 39 + 195417433 CC-TACG----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239798 39 -   7961872 cc-tacg----tt--tg---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79260 39 -    116970 ct-t---acg-tt--tt---------aa--ttca------g---gctc-------------cgggaccaa----tc-t-gcagta
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9855 39 +     12412 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------CGATACTAG----TT-T-GTGTTG
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                              1177 39 +      9876 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------GGATACTAG----TT-T-GTGTTG
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16773 39 -     24931 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1652 39 +      4564 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4457 39 -      7443 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395490 39 - 209938924 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                2074 39 +     10149 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1418 39 +     10417 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------AGATACTAG----TT-T-GTGTTG
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14806 39 +     16473 cc-t---aca-tt--tt---------aa--ctca------a---ggtc-------------tggtactaa----tt-t-gcagtg
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111545 39 + 121099817 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACCAG----TT-T-GTGTTG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       33114 39 -     47369 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tgataccag----tt-t-gtgttg
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33497 39 -     79414 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tgataccag----tt-t-gtgttg
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              30188 39 -     34454 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tgataccag----tt-t-gtgttg
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17590 39 -     22428 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tgataccag----tt-t-gtgttg
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32744 39 -     47109 cc-taca----tt--tt---------ca--ttca------a---gaac-------------tgataccag----tt-t-gtgttg
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240767 39 +   5703754 GC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10358 39 +     21866 GC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGATACTAG----TT-T-GTGTTG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122851 37 +    313613 ta-t---gta-t---ta---------aa--ttca------a---gctc-------------tggtaca-a----tt-t-gtggca
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1930 39 +     11297 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32323 39 +     58920 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18821 39 -     45317 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26479 39 -     42441 CC-TACG----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1669243                      4120 39 -      6251 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Semnopithecus_schistaceus.k141_1669243                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          32243 39 -     48123 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    53003 39 +     77746 tc-t---gta-tt--tc---------ca--ttga------a---gctt-------------tgctatcaa----g-tc-atgttg
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867610 38 -   1910179 cc-t---aca-tt--tt---------aa--ttca------a---gctc-------------tagtata-a----tt-t-gtggtg
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674827 38 +  18376816 ac-t---ata-ct--ta---------aa--ctta------a---actc-------------tggtata-a----tt-t-gcggtg
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1872421 38 +   3870691 c--t---aca-tt--tt---------ca--ttca------a---actc-------------tggtactaa----t--tggtgttg
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             17002 38 -     97271 cg-t---acc-tt--tt---------gg--ttca------a---gctc-------------tggtactaa----tt-g-gcagt-
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 4
s Suricata_suricatta.SurSur_flattened_line_6629             129169 36 +    196729 cc-t---acc-tt--tt---------gg--tcca------a---gctt-------------tggtgctaa----tt-g-tca---
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 3
s Sus_scrofa.CM000828.4                                    6648447 39 +  69701581 ct-t---ata-ct--tt---------aa--ttca------a---gctc-------------tggtactaa----tt-t-atagtg
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       394333 39 +   1523678 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTGCTAG----TT-T-GTGTCG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17861 39 +     22964 tt-t---aca-tt--tt---------aa--ttca------a---gctc-------------ttgtactaa----tt-t-gcggtg
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      195280 39 +    199430 tc-t---acg-tt--tt---------aa--ttta------a---gctc-------------tggtactac----tt-t-gctgtg
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    109260 39 -    539355 cc-t---acg-tt--tt---------aa--ttta------a---gctc-------------tggtattac----tt-t-gctgtg
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4873 31 +      9917 cc-tgaa----tt--tc---------ca--ttca------a---gctc-------------tggtactga----g----------
i Tarsius_lariang.k141_1733899                           C 0 I 4
s Tarsius_wallacei.k141_226975                               11669 31 +     20590 CC-TGAA----TT--TC---------CA--TTCA------A---GCTC-------------TGGTACTGA----G----------
i Tarsius_wallacei.k141_226975                           C 0 I 4
s Theropithecus_gelada.CM009954.1                           356493 39 - 186847797 CC-TACA----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              28106 32 -     33621 -----------TT--TT---------CA--TTC------AA---ACTC-------------T-GTACTAA----T-TT-GTACCA
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 12 I 963
s Tolypeutes_matacus.TolMat_scaffold_31955                   22835 39 -     31044 cc-c---aca-ct--tt---------ca--ttca------a---gctc-------------tggtactaa----tt-t-gtggtg
i Tolypeutes_matacus.TolMat_scaffold_31955               I 2 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    484190 39 -    610378 tt-t---aca-tt--tt---------aa--ttca------a---gctc-------------cggtactaa----tt-t-gtggtg
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        24232 39 +     26378 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     37030 39 -     78344 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23557 39 +     25722 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      31986 39 -     62838 CC-TACG----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           31977 39 +     46913 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12715 39 -     28527 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33917 39 -     64340 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31955 39 -     63452 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13406 39 +     22490 CC-TACG----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1372 39 +      9911 CC-TACG----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                         1167 39 -     33539 CC-TACG----TT--TT---------CA--TTCA------A---GAAC-------------TGGTACTAG----TT-T-GTGTTG
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258926 39 -   6242583 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4945 39 +     19340 cc-tacg----tt--tt---------ca--ttca------a---gaac-------------tggtactag----tt-t-gtgttg
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   178049 40 -    200418 cc-t---aca-tt-ttt---------aa--ctca------a---ggtc-------------tgataccaa----tt-t-gcagtg
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485846 38 -  10818551 cc-t---acg-tt--tt---------ca--ct-a------t---gctc-------------tggcactaa----tt-t-gtgatg
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1840107 36 -   4065304 cc-t-------tt--ct---------ca--taca------a---attg-------------tagtactaa----tt-t-gtgttg
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      14182 36 -     70247 cc-t-------tt--ct---------ca--ttca------a---attg-------------tagtactaa----tt-t-gtgtag
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369431 39 -  33153633 cc-t---aca-tt--tt---------aa--ctca------a---gctc-------------tggtactaa----tt-t-gcggtg
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7628 37 -     21056 tc-t---gta-t---ta---------aa--ttca------a---gctc-------------tggtata-a----tt-t-gtggca
i Uropsilus_gracilis.UroGra_scaffold_46687               I 23 C 0
s Ursus_maritimus.KK499267.1                                185743 38 +   5085361 ct-t---acc-tt--tt---------gg--ttca------a---gctg-------------tggtactaa----tt-g-gcagt-
i Ursus_maritimus.KK499267.1                             C 0 I 4
s Vicugna_pacos.KN270157.1                                   80562 39 +   5488506 cc-t---aca-tt--tt---------aa--ttta------a---gctc-------------tggtactca----tt-t-acagtg
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                109095 38 -    112863 cc-t---acc-tt--tt---------gg--ttca------a---gctc-------------tggtactaa----ta-g-gcagt-
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 I 4
s Xerus_inauris.XerIna_scaffold_2302                        178290 38 -    224448 c--t---aca-tt--tt---------ca--ttca------a---gctc-------------tggtactaa----t--tagtgttg
i Xerus_inauris.XerIna_scaffold_2302                     I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32748 38 -     86975 cc-t---acc-tt--tt---------gg--ttca------a---gctc-------------tggtactac----tt-g-gcagt-
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 I 4
s Zapus_hudsonius.ZapHud_scaffold_11398                       5016 40 -     63895 tc-g---aca-tt-ttt---------ca--ttca------a---gctc-------------tgctgctaa----t-tc-atgtta
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1392 39 +      3447 cc-t---aca-tt--tt---------aa--ctca------a---gctc-------------tggtactaa----tt-t-gcggtg
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      10325 41 +     36723 TGATTTTAG----G-------CA-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
s Acinonyx_jubatus.LLWD01001279.1                           816872 26 +   1699592 ---------------------cc-c--ttaat-atc---tttaa-gccac------------------agtgt
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     29057 42 +     63021 tgacctcag----ggag--ttctta--gcaat-ggt---tctga-gctac------------------agagt
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419331 26 +  29979442 ---------------------ca-c--ttaat-atc---tctga-gccac------------------agtgt
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 4 C 0
s Ailurus_fulgens.LNAC01001112.1                            219338 26 +    347723 ---------------------ca-c--ttaat-atc---tttgc-accac------------------agtgt
i Ailurus_fulgens.LNAC01001112.1                         I 4 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    21840 15 -     61208 ---------------------------------------TCTGA-CCCAC------------------AATGT
i Allactaga_bullata.AllBul_scaffold_20030                I 6 C 0
s Allenopithecus_nigroviridis.k141_3755588                   51278 41 +     53615 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3306 41 +     13857 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19862 41 -     21945 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21547 41 +     32033 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74800 41 -     84148 TGATGTTAG----A-------CT-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               47054 41 -     78289 TGATGTCAG----A-------CT-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46470 41 +     55831 TGATGTTAG----A-------CT-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44932 41 -     64179 TGATGTTAG----A-------CT-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           2035 41 -      3959 TGATGTTAG----A-------CT-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43557 41 +     45454 TGATGTTAG----A-------CT-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              49206 41 +     70886 TGATGTTAG----A-------CT-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11376 41 +     30854 TGATGTTAG----A-------CT-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35512 41 +     42133 TGATGTTAG----A-------CT-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592534 41 +   2318259 tgaccttag----gcag-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacgt
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180938 41 -    412891 cgactttag----g-aggat-ca-c--ttaat-atc---tctga-accac------------------gattt
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53688 41 -     68529 tgaccttag----gcgg-at-ca-t--ttcaa-gtc---tctga-gccac------------------aatgt
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3719 41 +     17741 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTCA-GCCAC------------------AATGT
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4344 41 -     15923 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTCA-GCCAC------------------AATGT
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674626 41 +   5030052 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTCA-GCCAC------------------AATGT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4620 41 -     16391 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTCA-GCCAC------------------AATGT
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               4179 41 -     17186 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTCA-GCCAC------------------AATGT
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27784 41 -     32367 tgatcttcg----gtag-at-ca-a--ttaat-gtc---tctga-gccct------------------gaggt
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9443 41 -     15198 tgactttaa----g-ag-aatca-g--ttaat-atc---tctga-acccc------------------gattt
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               277275 41 +  21539123 TGATGTTAG----A-------CT-GATCCATTATTGTC-TCTAA-ACCAC------------------AATGT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13440 41 +     48076 TGATGTTAG----A-------CT-GATCCATTATTGTC-TCTAA-ACCAC------------------AATGT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8576 41 -     28759 TGATGTTAG----A-------CT-GATCCATTATTGTC-TCTAA-ACCAC------------------AATGT
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              36132 41 +     44353 TGATGTTAG----A-------CT-GATCCATTATTGTC-TCTAA-ACCAC------------------AATGT
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51502 41 -     71267 TGATGTTAG----A-------CT-GATCCATTATTGTC-TCTAA-ACCAC------------------AATGT
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25560 41 -     33135 TGATGTTAG----A-------CT-GATCCATTATTGTC-TCTAA-ACCAC------------------AATGT
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7967185 41 -  23207421 tgaccttag----gcgg-at-ca-t--ttaat-gtt---gctga-gccac------------------aatgt
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3686 41 -     25979 tgaccttag----gcgg-at-ca-t--ttaat-gtt---gctga-gccac------------------aatgt
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93521 41 +    124022 tgaccttag----gcag-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacgt
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36710 41 +    288883 tgaccttag----gcag-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacgt
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  28423863 41 -  48749331 tgaccttag----gcag-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacgt
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                      769464 41 +   1948126 tgaccttag----gcgg-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacgt
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   27560009 41 -  45695690 tgaccttag----gcag-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacgt
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               1536690 41 -   4408762 tgaccttag----gcag-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacgt
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_96119                                  10356 41 +     28062 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45647 41 -     91139 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  23174 41 +     95584 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         23087 41 +    119600 tgatgttag----a-------cg-gatccattattgtc-tctaa-gccac------------------aatgt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12709 41 +     18648 TGATGTTAG----A-------TG-GATCCATTATTGTC-TCTAT-GCCAC------------------AATGT
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             12212 41 -     13885 TGAGGTTCG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            4423 41 -      8861 TGATGTTAC----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AACGT
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456765 41 + 189096842 TGATGTTAC----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               4339 41 +      8664 TGATGTTAC----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7635229 41 +  17673402 tgaccttag----gcag-at-ca-t--ttaat-atc---tcaga-gccac------------------aatgt
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           4669530 41 +   7040546 tgaccttag----gcag-at-ca-t--ttaat-atc---tcaga-gccac------------------aatgt
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                 1213228 41 +   1652518 tgaccttag----gcag-at-ca-t--ttaat-atc---tcaga-gccac------------------aatgt
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           42509270 26 +  60362399 ---------------------ca-t--ttaat-gtc---tttga-gccac------------------agtct
i CanFam4.chr16                                          I 4 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12905 26 -     23171 ---------------------ca-t--ttaat-gtc---tttga-gccac------------------agtct
i Canis_lupus_VD.CanFam_VD_scaffold_35101                I 4 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          226246 26 +   9314153 ---------------------ca-t--ttaat-gtc---tttga-gccac------------------agtct
i Canis_lupus_dingo.QKWQ01000480.1                       I 4 C 0
s Canis_lupus_familiaris.chr16                            41619383 26 +  59632846 ---------------------ca-t--ttaat-gtc---tttga-gccac------------------agtct
i Canis_lupus_familiaris.chr16                           I 4 C 0
s Canis_lupus_orion.HG994398.1                            45110964 26 -  63665305 ---------------------ca-t--ttaat-gtc---tttga-gccac------------------agtct
i Canis_lupus_orion.HG994398.1                           I 4 C 0
s Capra_aegagrus.CM003241.1                               27416538 41 -  46296322 tgaccttag----gcag-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacgt
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598535 41 +  44709034 tgaccttag----gcag-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacgt
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2443 41 -     20114 tgacgttag----gcaa-at-ca-c--ttcat-gtc---tctga-accat------------------aaaat
i Capromys_pilorides.CapPil_scaffold_26391               C 0 C 0
s Carlito_syrichta.NW_007259797.1                           274717 43 +    496798 TGACCTCAGTACCA-------CG-T--TGATTAGTGTC-TCTGA-GTCAC------------------AGTGT
i Carlito_syrichta.NW_007259797.1                        I 4 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               4327 41 +      9923 tgacttgag----g-ag-ggtca-c--ttagt-atc---tctga-gcccc------------------gattt
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31819 28 -     39886 tgaccttag----gcag-at-ca-a--ttaat-gtc---tc--------------------------------
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83538 41 -    217609 tgaccctag----agag-at-ca-t--ttaat-gtc---tctga-gccac------------------aaggt
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_porcellus.DS562891.1                               5003842 41 +  23407841 ttaccttag----gtaa-at-tg-g--ttaat-gtc---actga-accac------------------aatgt
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                          727 41 -    143979 ttaccttag----gtaa-at-tg-g--ttaat-gtc---actga-accac------------------aatgt
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebuella_niveiventris.k141_592277                           7680 41 -     12580 TGATGTTAG----A-------TG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45789 41 +     53515 TGATGTTAG----A-------TG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376416 41 -  26074798 TGATGTTAG----A-------CG-GATCCATTATTGCC-TCTAA-GCCAC------------------AGTGT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10485 41 -     34880 TGATGTTAG----A-------CG-GATCCATTATTGCC-TCTAA-GCCAC------------------AGTGT
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69583 41 -     89041 tgatgttag----a-------cg-gatccattattgcc-tctaa-gccac------------------agtgt
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2380 43 -     76265 tgacctcagtacca-------tg-t--tgattagtgtc-tctga-gccac------------------agtgt
i Cephalopachus_bancanus.k141_1140705                    I 4 C 0
s Ceratotherium_simum.JH767749.1                          15496085 41 -  27778364 tgaccttag----g-aggat-ca-c--ttaac-gtc---tctga-gccac------------------aatag
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22916 41 +     27315 tgaccttag----g-aggat-ca-c--ttaac-gtc---tctga-gccac------------------aatag
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                144362 41 -   4669795 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCGC------------------AATGT
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                          336 41 +      3297 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCGC------------------AATGT
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3534 41 -     14410 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCGC------------------AATGT
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47916 41 -    148725 tgatgttag----g-------ca-gatccattattgtc-tctga-gccgc------------------aatgt
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        30193 41 -     40656 TGATGTTAG----G-------CA-TATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                          10152 41 +     20796 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            15266 41 -     17524 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          30999 41 -     34525 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14777 41 -     25376 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367366 41 -  39242232 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  273091 41 +  21565898 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35458 41 -     45857 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30359 41 -     32606 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6514 41 +      8499 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28919 41 +     70610 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25881 39 +     36323 AGATGTTAG----G-------CA-GATCCATTATTGTC-TC--A-GCCAC------------------AATGT
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15762 41 -     19938 tgatcttag----gcag-at-cc-t--ttaac-gtc---tctga-gccac------------------aatgt
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            11449 41 -     32913 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21862 41 -     40346 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             22116 41 +    216457 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21906 41 +     39636 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          33997 41 -     52013 TGAGGTTAG----A-------TG-GATCCATCATTGTC-TCTGA-GCCAC------------------AGTGT
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           44987 41 -    112038 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10537 41 +     34062 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346781 41 +  18827391 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13320 41 -     44032 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            308167 41 - 135778131 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2463 41 +     10270 tgatcttgt----gcgg-at-ca-t--ttaat-gtc---tctaa-gccac------------------agtgt
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            609940 41 -    839153 tgatcttgt----gcag-at-ca-t--ttaat-gtc---tctaa-gccac------------------agtgt
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2684 41 -      4087 tgaccttag----gtag-at-ta-c--ttaat-att---tcgga-gccac------------------aatgt
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412575 41 -   2368649 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AGTGT
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382457 41 - 200372422 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------agtgt
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               6010 41 -     84244 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------agtgt
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35811037 41 +  53390261 TGACTTGAG----G-CA-GATCA-T--TTAAT-ATC---TTTGA-ACCAC------------------AATGT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6591 26 -      8242 ---------------------TA-C--TTACT-GTC---TCTGA-GTCAC------------------AATGT
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47749 42 -     83289 tgaccccag----ggag-gt-ttta--gcaat-gtt---tctga-accac------------------aaagt
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213119270 42 - 224834208 tgaccttgg----ggag--ttctta--gcaat-gtt---tctga-gccac------------------agagt
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_205242               188 41 +      5812 tgaccttag----gcaa-at-ca-t--ttaat-gtc---tttga-gtcac------------------aatgt
i Crocidura_indochinensis.CroInd_scaffold_205242         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              8213 26 +     87169 ---------------------cc-c--ttatt-gtc---tctga-gctac------------------agtgt
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650483 41 -   1526836 tgaccttag----gcag-at-ca-a--taaat-gtc---tctga-atcac------------------aatgt
i Ctenodactylus_gundi.CteGun_scaffold_65                 I 5 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  23113 41 +     50838 tggcattag----gcaa-at-cg-c--ttaat-gtc---tctga-accat------------------aatac
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12604 41 +     36344 tgaccttag----gcaa-at-ca-a--ttaat-gtc---tctga-accac------------------aatgt
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            32045 40 +     75252 cgaccttag----gcaa-at-ca-a--ttaat-gtc---tct-a-atcgc------------------aatgt
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                          2113506 41 -   2246927 tgatcttag----gcag-ct-ca-t--tcaag-gtc---tctga-gccgt------------------gatgt
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635597 41 -  35494412 tgaccttag----gcgg-a-cca-t--ttaat-gtt---gctga-gccac------------------aatgt
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11869320 41 -  20541912 agactttag----g-aggat-ca-c--ttagt-gtc---tccga-accac------------------agttt
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668355 41 -   1390856 tgaccttag----g-aggat-ca-c--ttaac-atc---tctga-gccac------------------aacat
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  143154 41 -    198055 tgaccttag----g-aggat-cc-c--ttaac-gtc---tctga-gccac------------------aatag
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955858 41 -  37912305 tgaccttgg----gcaa-at-ca-a--ttaat-gtt---tgtga-gtcac------------------aatgt
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                   1462 41 +     14058 tgaccttgg----gcaa-at-ca-a--ttaat-gtt---tttga-gtcac------------------aatgt
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_341948                  205 41 -      1676 tgaccttag----gcaa-at-ta-g--ttatt-ttc---tctgt-atcac------------------aatgt
i Dolichotis_patagonum.DolPat_scaffold_341948            I 45 C 0
s Echinops_telfairi.JH980293.1                            62858815 39 - 111700974 tgaccttag----gctg-at-ca-c--ttcat-gcc---tttga-gcc--------------------agtgt
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                              10005 41 +     19438 aggccttag----g-aggat-ca-c--ttaat-gtc---tccca-gccac------------------agtgt
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       246324 41 -    607251 tgaccttag----gcgg-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacgt
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35458 42 +    110024 TGACCCTAG----G-GA-GTTCTTA--GCAAT-GAT---TCTGA-GCCAC------------------AGAGT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           17379 42 +     18970 TGACCCTAG----A-GA-GTTCTTA--GCAAT-GAT---TCTGA-GCCAC------------------AGAGT
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925861 26 +  41312741 ---------------------ca-c--ttaat-atc---tttga-gccac------------------agtgt
i Enhydra_lutris.KZ291758.1                              I 4 C 0
s Eptesicus_fuscus.JH977646.1                             12583090 40 +  14770903 tgactttag----g-aggat-ca-c--ttaat-gtc---tctga-gccac------------------a-tgt
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045598 41 -   4378816 tgaccttag----g-aggat-ca-c--ttaat-gtc---tctga-gccac------------------aatgt
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379528 41 +  39960074 tgaccttag----g-aggat-ca-c--ttaat-gtc---tctga-gccac------------------aatgt
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415510 41 -    498745 tgaccttag----g-aggat-ca-c--ttaat-gtc---tctga-gccac------------------aatgt
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671777 41 +   7059049 TGGTCTTAG----G-CA-GTTTG-T--GTAAT-GTC---TGCAA-ACCAC------------------AGTGT
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               266309 41 +  21539334 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74800 41 -    133382 tgaccttag----gcgg-at-ca-t--ttaat-gtt---gctga-gccac------------------aatgt
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2522 41 +     25849 tgaccttag----gcgg-at-ca-t--ttaat-gtt---gctga-gccac------------------aatgt
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250950 26 - 206538554 ---------------------cc-c--ttaat-gtc---tttaa-gccac------------------actgt
i Felis_catus.CM001381.2                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                          185120906 26 - 205367284 ---------------------CC-C--TTAAT-GTC---TTTAA-GCCAC------------------ACTGT
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  1547 26 +     25330 ---------------------CC-C--TTAAT-GTC---TTTAA-GCCAC------------------ACTGT
i Felis_nigripes.FelNig_flattened_line_44075             I 3 C 0
s Fukomys_damarensis.KN121974.1                            2927039 41 -   3816255 tgactttag----gcaa-at-ct-a--ttaat-gtc---tctga-actgc------------------aatgc
i Fukomys_damarensis.KN121974.1                          I 643 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                5393 42 -     28519 tgacctttg----gcag-attca-g--tcaat-gtc---tctga-gccac------------------aatgt
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2582 41 +    660261 tgaccttag----gcgg-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacgt
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            5399 41 -      6791 tgatcttgg----gcag-at-ca-a--tcaat-gtc---ttcga-gccac------------------aatgc
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_3218903                               1078 41 -      2763 TGATTTTAG----G-------CA-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Gorilla_beringei.k141_3218903                          I 92 n 41
s Gorilla_gorilla.LT578341.1                                259498 41 - 186649187 tgattttag----g-------ca-gatccattattgtc-tctaa-gccac------------------aatgt
i Gorilla_gorilla.LT578341.1                             I 92 n 41
s Graphiurus_murinus.GraMur_scaffold_10447                    7336 24 -     78134 ------------------------a--ttgat-gtc---tctga-gccac------------------agtgt
i Graphiurus_murinus.GraMur_scaffold_10447               I 13 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34573 26 -    327341 ---------------------cc-c--ttact-gtc---tctga-gccac------------------agtgt
i Helogale_parvula.HelPar_flattened_line_2585            I 3 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 16248 41 +     48891 tgaccttag----gcag-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacgt
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1939488 41 -  22651954 tgaccttag----gcaa-at-ca-a--ttact-gac---tctga-actac------------------aatgt
i Heterocephalus_glaber.JH602082.1                       I 644 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6545 41 +      8654 tgaccttag----gcag-ct-ca-t--ttaat-gtc---tctga-gcggc------------------agtgt
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11635 41 -     36432 tgaccttag----gcgg-at-ca-t--ttaat-gtc---tccga-gccac------------------aatgt
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                396 33 -      8370 --------g----g-aggat-cc-t--ttaat-gtc---tctga-gccac------------------agtgc
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 C 0
s Hoolock_leuconedys.ctg274                                    145966 41 -    630532 TGATGTTAG----G-------CA-GATCCATTGTTGTC-TCTAA-GCCAC------------------AATGT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  74245 44 +     83186 ---------------------cc-c--ttact-gtc---tctga-gccacgttcctGAAGTTCAGCCAAGTGT
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 3 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75781 41 +    143317 tgaccttag----gcaa-at-ta-g--ttaat-gtc---tctga-accac------------------aatgt
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_1155965                               9011 41 +     12352 TGATGTTAG----G-------CA-GATCCATTGTTGTC-TCTAA-GCCAC------------------AATGT
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              16198 41 +     55766 TGATGTTAG----G-------CA-GATCCATTGTTGTC-TCTAA-GCCAC------------------AATGT
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055728 41 + 191637585 TGATGTTAG----G-------CA-GATCCATTGTTGTC-TCTAA-GCCAC------------------AATGT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804606 41 +  11177569 TGATGTTAG----G-------CA-GATCCATTGTTGTC-TCTAA-GCCAC------------------AATGT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11646 41 -    135385 tgaccttag----gtag-at-ca-g--ttaat-gtc---tctga-actgc------------------aatgt
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390896 41 +   7955117 tgatctcaa----gcag-at-ca-a--ttaat-gtc---tctga-gcccc------------------aacat
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13701 41 -     16823 tgaccttag----gcag-at-ca-t--ttaat-gtt---gctga-gccac------------------aatgt
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1243389 10 +   9596543 ------------------------------GT-GTT---TCTGA-----------------------------
i Jaculus_jaculus.JH725527.1                             I 8 I 4
s Kogia_breviceps.KogBre_flattened_line_3970                 75539 41 -     97402 tgaccttag----gcgg-at-ca-t--ttaag-gtt---gctga-gccac------------------aatgt
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45822 41 +    110728 TGATGTTGG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1777 41 -     25587 tgactctag----g-aggat-ca-c--ttaat-gtc---tctga-gccac------------------aatat
i Lasiurus_borealis.LasBor_scaffold_61236                I 39 I 35
s Leontocebus_fuscicollis.k141_3470480                        1268 41 -     23187 TGAGGTTAG----A-------CG-GATCCATCATTGTC-TCTAA-GCCAC------------------AGTGT
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1582 41 -     14280 TGAGGTTAG----A-------CG-GATCCATCATTGTC-TCTAA-GCCAC------------------AGTGT
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                        1222 41 +      3713 TGAGGTTAG----A-------CG-GATCCATCATTGTC-TCTAA-GCCAC------------------AGTGT
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1408 41 +      8855 TGAGGTTAG----A-------CG-GATCCATTATTTTC-TCTAA-GCCAC------------------AATGT
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         6209 41 -     13645 TGAGGTTAG----A-------CG-GATCCATTATTTTC-TCTAA-GCCAC------------------AATGT
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        817133 26 -   3914936 ---------------------ca-c--ttatt-atc---tttga-gccac------------------agtgt
i Leptonychotes_weddellii.KB714746.1                     I 4 C 0
s Lepus_americanus.LepAme_scaffold_56121                     23395 41 +     24238 tgacctgag----gcag-at-ca-g--ttaat-gcc---tgtga-gccac------------------aatgt
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344883 41 +    662738 tgaccttag----gcgg-at-ca-t--ttaat-gtt---gctga-gccac------------------aatgt
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               337239 39 -   1826925 tgatgttag----g-------ca-gatccattattg---tctga-gccac------------------aatgc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39088286 41 +  43346337 tgaccttag----gcag-gt-ca-t--ttaat-gtc---tctga-gccac------------------aatgt
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618538 26 +  59628241 ---------------------ca-t--ttaat-gtc---tttga-gccac------------------agtct
i Lycaon_pictus.CM007581.1                               I 4 C 0
s Macaca_arctoides.k141_1757516                              48636 41 -     61512 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 376298 41 -  60120075 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28566 41 +     30207 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3404 41 -      5035 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28519 41 +     30527 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39695 41 -     50087 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49440 41 +     51645 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418642 41 - 187317192 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402873 41 +  25927173 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  52044 41 -     62418 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4575 41 +     14901 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48517 41 +     59329 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274424 41 +    668171 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  3056 41 -      5049 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 6223 41 +     17132 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                226978 41 -    270270 cggccttag----g-aggat-ca-c--ttaat-gtc---tctca-gccac------------------agtgt
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325706 41 +  24302211 tgatgttag----g-------ca-gatccattattgtc-tctga-gctgc------------------aatgt
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360537 41 -    752769 tgatgttag----g-------ca-gatccattattgtc-tctga-gctgc------------------aatgt
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             677156 41 -    737560 tgaccttag----g-ag-ggtta-c--ttaat-gtc---tctga-gccac------------------aatgt
i Manis_javanica.JSZB01003497.1                          C 0 I 1907
s Manis_pentadactyla.KN006162.1                             224450 41 +    317179 tgaccttag----g-ag-ggtta-c--ctaat-gtc---tctga-gccac------------------agtgt
i Manis_pentadactyla.KN006162.1                          C 0 I 1896
s Marmota_marmota.CZRN01000018.1                           7505096 41 +  40650429 tgatcttaa----gcag-at-ca-a--ttaat-gtc---tctga-gcccc------------------aacat
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       154300 33 +    207569 --------g----gaag-at-ca-c--ttaat-gtc---tctga-gccgc------------------aatgt
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29873 26 -     74585 ---------------------tg-c--ttaat-atc---tttga-gccac------------------agtgt
i Mellivora_capensis.MelCap_flattened_line_19308         I 4 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53453 42 -    140813 TGACCCTAG----G-GA-GTTCTTA--GCAAT-GTT---TCTGA-GCCAC------------------AGAGC
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17433564 42 +  29670104 TAACCCCAG----G-GA-GTTCTTG--GCAAT-GTT---CCTGA-GCCAC------------------AGAGG
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     91166 41 +     93471 tgaccttag----gcgg-at-ca-t--ttaat-gtt---gctga-gccac------------------aatgt
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12818 41 +     17804 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAT-GCCAC------------------AATGT
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                545 41 +      5551 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAT-GCCAC------------------AATGT
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21629 34 -     26561 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAT-GCC-------------------------
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    49996 41 +    145209 tgactgtag----gctg--gacc-t--ttcat-gcc---tttga-gccac------------------agggt
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188899 41 +    200668 tgactttag----g-aggat-ca-c--ttagt-atc---tctga-aacac------------------agtgt
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966866 42 +  27267610 TAACCCTAG----G-GA-GTTCTTA--GCAAT-GAT---TCCGA-GCCAC------------------AGGGT
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368719 41 -   8254450 tgattttag----g-aggat-ca-c--ttaat-ttc---tctga-gccat------------------aatgt
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46450 41 -     48117 tgattttag----g-aggat-ca-c--ttaat-ttc---tctga-gccac------------------aacgt
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25805 41 -     27822 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12366 26 +     27589 ---------------------ca-c--ttatt-atc---tttga-gccac------------------agtgt
i Mirounga_angustirostris.MirAng_flattened_line_54046    I 4 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   363275 41 +    437263 tgaccttag----gc-g-aacca-t--ttaat-gtt---gctga-gccac------------------aatgt
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183353 41 +    366855 tgactttaa----g-ag-ggttg-c--tgaac-atc---tctga-gccac------------------aacgt
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32480 41 -     82753 tgaccttag----gcgg-at-ca-t--ttaaa-gtc---tctga-gtcac------------------gatgt
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   22332 26 -     63510 ---------------------CC-C--TTAGT-GTC---TCAGA-GCCAC------------------AGTGT
i Mungos_mungo.MunMun_flattened_line_18455               I 3 C 0
s Murina_feae.MurFea_scaffold_17764                          45706 41 +     47283 tgaatttag----g-ag-gacca-c--ttaat-gct---tctga-gccac------------------aatgt
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35598286 34 + 120012414 TGACCCCAG----G-GA-GTCCTTA--GCAAT-GTT---TCTGA-GT--------------------------
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41691602 34 + 129401213 TGACCCCAG----G-GA-GTCCTTA--GCAAT-GTT---TCTGA-GT--------------------------
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58219562 34 +  89631738 TGACCTCAG----G-GA-GTCCTTA--GCAAT-GTT---TCTGA-GT--------------------------
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39500521 34 + 130317789 TGACCCCAG----G-GA-GTCCTTA--GCAAT-GTT---TCTGA-GT--------------------------
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3409 41 -    124358 tgatcttgg----gcag-at-ca-a--tcaat-gcc---tccaa-gccac------------------aatgt
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358823 26 +  14710649 ---------------------ca-c--ttaat-atc---tttga-gccac------------------agtgt
i Mustela_putorius.JH418006.1                            I 4 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1500 40 -     27262 TGCCATTAG----G-CA-AATCA-C--TTAAT-ATC----CAGA-ACGAT------------------AATAT
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myotis_brandtii.KE162005.1                               9797711 41 +  10118263 tgagtttag----g-aggat-ca-c--ttaat-gtc---tctga-gccac------------------aatgt
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391885 41 +   6019432 tgactttag----g-ag-gctca-c--ttaaa-gtc---tctga-gccac------------------aatgt
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387924 41 +   4330536 tgagtttag----g-aggat-ca-c--ttaat-gtc---tctga-gccac------------------aatgt
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6711 41 +     18357 tgagtttag----g-ag-gctca-c--ttaat-gtc---tctga-gccac------------------aatgt
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950481 40 +   3037898 tgacctcag----ggag-at-ca----ttaat-gtt---tctga-gcctt------------------aatgt
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              32585 41 +     34575 TGATGTTAA----G-------CA-GATCCATCATTGTC-TCTGA-GCCAC------------------AATGT
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469813 26 -  31847680 ---------------------ca-c--ttaat-atc---tttga-gccac------------------agtgt
i Neomonachus_schauinslandi.NINY01007730.1               I 4 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235933 41 -   7148211 tgaccttag----gcgg-a-cca-t--ttaat-gtt---gctga-gccac------------------aatgt
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131624 41 -    149072 tggctttag----g-ag-gacca-g--ttcat-atc---tctga-gccgc------------------aatgt
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56901 41 -    132029 TGATGTTAG----G-------CA-GATCCATTGTTGTC-TCTAA-GCCAC------------------AATGT
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              12996 41 -     16345 TGATGTTAG----G-------CA-GATCCATTGTTGTC-TCTAA-GCCAC------------------AATGT
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18885 41 +     22201 TGATGTTAG----G-------CA-GATCCATTGTTGTC-TCTAA-GCCAC------------------AATGT
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8417115 41 -  22158432 TGGTATTAG----G-------CA-GATCCATTGTTGTC-TCTAA-GCCAC------------------AATGT
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29290 41 -     54323 TGATGTTAG----G-------CA-GATCCATTGTTGTC-TCTAA-GCCAC------------------AATGT
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                202243 26 +   9404916 ---------------------ca-t--ttaat-gtc---tttga-gccac------------------agtgt
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 4 C 0
s Octodon_degus.JH651603.1                                11059774 41 -  11899542 tgacattag----gcaa-at-ca-c--ttaat-gtc---tctga-accat------------------aatat
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1455582 26 +   2017862 ---------------------ca-c--ttaat-atc---tttga-gcaac------------------agtgt
i Odobenus_rosmarus.KB229312.1                           I 4 C 0
s Odocoileus_virginianus.KZ100018.1                         442876 41 -    630418 tgaccttag----gcgg-at-ca-t--ttcaa-gcc---tctga-gccac------------------aatat
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22533 41 +    150152 tgaccttag----gcgg-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacgt
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97495 42 -    140218 tgaccctag----ggag--ttctta--gcaat-gat---tctga-gccac------------------agagt
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    8067 42 -     41509 TGACTCTAG----G-GA-GTTTTAA--GCAAT-GTT---TCTGA-GCCAC------------------AGAGT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8106346 41 +  10937097 tgaccttag----g-tt-ttttt-t--ttaat-gtt---gctga-gccac------------------aatgt
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3334 41 +     11607 tgacctaag----acag-at-ca-t--ttaat-gtc---tctga-gccac------------------aaagt
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107109684 41 - 174332312 tgacctgag----gcag-at-ca-g--ttaat-gtc---tgtga-gccac------------------aatgt
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        43405 26 +    559221 ---------------------CA-T--TTAAT-GTC---TTTGA-GACAC------------------AGTGT
i Otocyon_megalotis.JAEUCK010005147.1                    I 4 C 0
s Ovis_aries.CM001607.2                                   26411274 41 -  44047080 tgaccttag----gcag-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacat
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11897 41 +     17875 tgaccttag----gcag-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacgt
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  857 41 +      1186 TGATTTTAG----G-------CA-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Pan_paniscus.AJFE02001037.1                            I 92 C 0
s Pan_troglodytes.NBAG03003182.1                             16682 42 -     24457 TGATTTTAG----G-------CA-GATCCATTATTGTCCTCTAA-GCCAC------------------AATGT
i Pan_troglodytes.NBAG03003182.1                         I 451 I 100
s Panthera_onca.PanOnc_flattened_line_3271                   28880 26 -    230217 ---------------------CC-C--TTAAT-ATC---TTTAA-GCCAC------------------AGTGT
i Panthera_onca.PanOnc_flattened_line_3271               I 3 C 0
s Panthera_pardus.KV860321.1                              18466121 26 -  18783137 ---------------------cc-c--ttaat-atc---tttaa-gccac------------------agtgt
i Panthera_pardus.KV860321.1                             I 3 C 0
s Panthera_tigris.KE722367.1                               3976720 26 +   8748460 ---------------------cc-c--ttaat-atc---tttaa-gccac------------------agtgt
i Panthera_tigris.KE722367.1                             I 3 C 0
s Pantholops_hodgsonii.KE114653.1                          1622793 39 +   2937107 taaccttag----gcag-at-ca-t--ttcaa-gtc-----tga-gccac------------------aacgt
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246721 41 - 183742232 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            13006 41 +     21308 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295749 41 -  20919399 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25648 41 -     27687 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2325 41 +     10553 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  2286 41 -     10386 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     18999 25 +     78924 ---------------------C--C--TTACT-GTC---TCTGA-GCCAC------------------AGTGT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 3 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        7967 41 +      9367 tgacccagg----gcaa-at-ca-a--ttaat-gtt---tgtga-gccac------------------aatgt
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         251219 42 +  18517816 tgaccctag----ggag--ttctaa--gcaat-gtt---tctga-gccac------------------agagt
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7867 41 -     63832 tgaccttag----gtgg-a-cca-t--ttaat-gtt---gctga-gccac------------------aatgt
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            5971 41 +     55023 tgatgttag----g-------ca-gatccattatcgtc-tcgga-gccac------------------aatgt
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5494 41 -     89929 tgatgttag----g-------ca-gatccattatcgtc-tcgga-gccac------------------aatgt
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            6082 41 +     40849 tgatgttag----g-------ca-gatccattatcgtc-tcgga-gccac------------------aatgt
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257811 41 +  14605196 TGATGTTAG----G-------CA-GATCCATTATCGTC-TCGGA-GCCAC------------------AATGT
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             8202 41 +     22231 tgattttag----g-aggat-ca-c--ttaat-gtc---tctga-accac------------------aatgt
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             67336 42 +    207309 TGATGTTAG----A-------CA-GATGCATTATTGTC-TCTAAAGCCAC------------------AATGT
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8431 42 -     25401 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAAAGCCAC------------------AATGT
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               34177 42 +     58159 TGATGTTAG----A-------CA-GATGCATTATTGTC-TCTAAAGCCAC------------------AATGT
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34453 42 +     63561 TGATGTTAG----A-------CA-GATGCATTATTGTC-TCTAAAGCCAC------------------AATGT
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           34208 42 +     51148 TGATGTTAG----A-------CA-GATGCATTATTGTC-TCTAAAGCCAC------------------AATGT
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              559184 42 -   4542175 TGATGTTAG----A-------CA-GATGCATTATTGTC-TCTAAAGCCAC------------------AATGT
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           34192 42 +     51125 TGATGTTAG----A-------CA-GATGCATTATTGTC-TCTAAAGCCAC------------------AATGT
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            5115 41 +     19503 tgaccttag----gcgg-at-ca-t--ttaat-gtt---gctga-gccac------------------aatgt
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10623 41 +     39866 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5705 41 -      9282 TGATGTTAG----G-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       45109 41 -     87950 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45503 41 -     88961 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10201 41 -     39403 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          45153 41 +     87928 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         10200 41 -     60166 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-ACCAC------------------AATGT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      17121 41 -     67232 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          45053 41 -     90634 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46520 41 +     89403 TGATGTTAG----A-------CG-GATCCATTATTGTC-TCTAA-ACCAC------------------AATGT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182658 41 - 189387572 TGATTTTAG----G-------GA-GATCCATTATTGTC-TCTAA-GCCAC------------------AATGT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197400 41 -   9816681 tgattttag----g-------ga-gatccattattgtc-tctaa-gccac------------------aatgt
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              31169 41 +     69807 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48352 41 -     80239 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 3077 41 -     12774 tgaccttag----gcag-ct-ca-t--ttaat-gtc---tctga-gcagc------------------agtgt
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Psammomys_obesus.NESX01036366.1                            40986 42 +     52041 tgaccctag----ggag--ttctta--gcaat-gtt---tctga-gccac------------------agagc
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            55983 41 -     66298 tgactttag----g-aggat-ca-c--ttaac-gtc---tctga-accac------------------aatgt
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8358 26 -     18639 ---------------------ca-c--ttaat-atc---tttga-gccac------------------agtgt
i Pteronura_brasiliensis.PteBra_flattened_line_48144     I 4 C 0
s Pteropus_alecto.KB030862.1                               5844553 41 -  28871421 aggccttag----g-aggat-ca-c--ttaat-gtc---tccta-gccac------------------agtgt
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3541069 41 -   4952924 aggccttag----g-aggat-ca-c--ttaat-gtc---tccca-gccac------------------agtgt
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18103113 26 +  38429054 ---------------------cc-c--ttaat-atc---tttaa-gccac------------------agtgt
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                             30538 41 +     91421 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  157089 41 -   7812017 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11389 41 +     72585 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5394 41 -     55207 tgaccttag----gcgg-at-ca-t--ttcaa-gtc---tctga-gcccc------------------aatat
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37026175 34 -  90668790 TAACCCCAG----G-GA-GTTCTTA--GCAAT-GTT---TCTGA-GT--------------------------
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918448 32 +   3329780 --------g----g-aggat-cc-t---taat-atc---tctga-gccac------------------aatat
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             4995 41 +      7119 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125665 41 + 195417433 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239837 41 -   7961872 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79299 41 -    116970 aggccttag----g-aggat-ca-c--ttaat-gtc---tccca-gccac------------------agtgt
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9894 41 +     12412 TGAGGTTAG----A-------TG-GATCCATCATTGTC-TCTGA-GCCAC------------------AGTGT
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                              1216 41 +      9876 TGAGGTTAG----A-------CG-GATCCATCATCGTC-TCTAA-GCCAC------------------AGTGT
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16812 41 -     24931 TGAGGTTAG----A-------CG-GATCCATCATTGTC-TCTAA-GCCAC------------------AGTGT
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1691 41 +      4564 TGAGGTTAG----A-------CG-GATCCATCATTGTC-TCTAA-GCCAC------------------AGTGT
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4496 41 -      7443 TGAGGTTAG----A-------CG-GATCCATCATTGTC-TCTAA-GCCAC------------------AGTGT
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395529 41 - 209938924 TGAGGTTAG----A-------CG-GATCCATCATTGTC-TCTAA-GCCAC------------------AGTGT
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                2113 41 +     10149 TGAGGTTAG----A-------CG-GATCCATCATTGTC-TCTAA-GCCAC------------------AGTGT
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1457 41 +     10417 TGAGGTTAG----A-------CG-GATCCATCATCGTC-TCTAA-GCCAC------------------AGTGT
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14845 41 +     16473 tgaccttag----gcag-at-ca-t--ttcaa-gtc---tctga-gccac------------------aacat
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111584 41 + 121099817 TGATGTGAG----A-------CA-GATCCATTATTGTC-CCTAA-GCCAC------------------AGTGT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       33153 41 -     47369 tgatgtgag----a-------ca-gatccattattgtc-cctaa-gccac------------------agtgt
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33536 41 -     79414 tgatgtgag----a-------cg-gatccattattgtc-cctaa-gccac------------------agtgt
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              30227 41 -     34454 tgatgtgag----a-------cg-gatccattattgtc-cctaa-gccac------------------agtgt
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17629 41 -     22428 tgatgtgag----a-------cg-gatccattattgtc-cctaa-gccac------------------agtgt
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32783 41 -     47109 tgatgtgag----a-------ca-gatccattattgtc-cctaa-gccac------------------agtgt
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240806 41 +   5703754 TGATGTTAG----A-------CG-GATCCATTATTGCC-TCTAA-GACAC------------------AGTGT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10397 41 +     21866 TGATGTTAG----A-------CG-GATCCATTATTGCC-TCTAA-GACAC------------------AGTGT
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122888 41 +    313613 tgactttag----gcag-at-ca-t--ttaat-gtc---tctga-gccac------------------aatgt
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          1969 41 +     11297 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32362 41 +     58920 tgatgttag----g-------ca-catccattattgtc-tctga-gccac------------------aatgt
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18860 41 -     45317 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26518 41 -     42441 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1669243                      4159 41 -      6251 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Semnopithecus_schistaceus.k141_1669243                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          32282 41 -     48123 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    53042 42 +     77746 ttaccccag----ggag--ttctta--gcaac-gtt---tctga-gccac------------------agagc
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867648 41 -   1910179 tgaccttag----gcag-at-ca-t--ttaat-gtc---tctga-accac------------------aacat
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674865 41 +  18376816 tgaccttag----gcag-at-ca-c--ttatt-gtc---tttga-gccac------------------aatgt
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1872459 41 +   3870691 tgatcttaa----gcag-at-ca-a--ttaat-gtc---tctga-gcccc------------------aacat
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             17044 26 -     97271 ---------------------ta-c--ttaat-atc---tttga-gccac------------------agtgt
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 4 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             129208 26 +    196729 ---------------------cc-c--ttact-gtc---tctga-gccac------------------agtgt
i Suricata_suricatta.SurSur_flattened_line_6629          I 3 C 0
s Sus_scrofa.CM000828.4                                    6648486 41 +  69701581 tgaccctag----acag-at-ca-t--ttcat-gtc---tctga-tccac------------------taggt
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       394372 26 +   1523678 TGATGTTAG----G-------CA-GATCCATTATTGTC-----------------------------------
i Symphalangus_syndactylus.tarseq_199                    C 0 I 1
s Tadarida_brasiliensis.TadBra_scaffold_54991                17900 41 +     22964 tgactttag----g-aggat-ca-c--ttaat-gtc---tctga-gccac------------------ggtgt
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      195319 41 +    199430 tgatcttag----g-aggat-ca-c--ttaat-gtc---tctga-gccac------------------aatgt
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    109299 41 -    539355 tgaccttag----g-aggat-ca-c--ttaat-gtc---tctga-gccac------------------aatgt
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4908 43 +      9917 tggcctcagcacca-------ca-t--tggttactgtc-tctga-gccac------------------agtgt
i Tarsius_lariang.k141_1733899                           I 4 C 0
s Tarsius_wallacei.k141_226975                               11704 35 +     20590 TGGCCTCAGTACCA-------CA-T--TGATTAATGTC-TCTGA-GC--------------------------
i Tarsius_wallacei.k141_226975                           I 4 C 0
s Theropithecus_gelada.CM009954.1                           356532 41 - 186847797 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AGTGT
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              29101 41 -     33621 tgacctcag----ataa-at-ca-g--ttaat-gtc---tctga-accac------------------aatgt
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 963 C 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22874 41 -     31044 tgatctcag----gcag-at-cc-t--ttaat-gtc---tctga-gccac------------------aatgc
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    484229 41 -    610378 tgactttag----g-aggat-ca-c--ttagc-atc---tctga-accac------------------aatgt
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        24271 41 +     26378 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     37069 41 -     78344 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23596 41 +     25722 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      32025 41 -     62838 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           32016 41 +     46913 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12754 41 -     28527 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33956 41 -     64340 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          31994 41 -     63452 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13445 41 +     22490 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1411 41 +      9911 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                         1206 41 -     33539 TGATGTTAG----G-------CA-GATCCATTATTGTC-TCTGA-GCCAC------------------AATGT
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             258965 41 -   6242583 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        4984 41 +     19340 tgatgttag----g-------ca-gatccattattgtc-tctga-gccac------------------aatgt
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   178089 41 -    200418 tgaccttag----gcgg-at-ca-t--ttaaa-gtc---tctga-gttac------------------aacgt
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485884 41 -  10818551 tgaccttag----gcag-gt-ca-t--ttaat-gtc---tctga-gccac------------------aatgt
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1840143 39 -   4065304 agaccttag----gcag-at-aa-a--ctaat-gt-----ctga-gccac------------------agtgt
i Tupaia_chinensis.KB320699.1                            C 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      14218 39 -     70247 ggaccttag----gcaa-at-aa-a--ctaat-gt-----ctga-gctac------------------agtgt
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       17369470 41 -  33153633 tgaccttag----gcgg-a-cca-t--ttaat-gtt---gctga-gccac------------------aatgt
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7665 41 -     21056 tgactttac----gcat-gt-ca-t--tttat-gtc---tctga-accac------------------aatgc
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185785 26 +   5085361 ---------------------ca-c--ttaat-atc---tctga-gccac------------------agtgt
i Ursus_maritimus.KK499267.1                             I 4 C 0
s Vicugna_pacos.KN270157.1                                   80601 41 +   5488506 tgaccttag----gcag-at-ca-t--ttaat-atc---tcaga-gccac------------------aatgt
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_12041                109137 26 -    112863 ---------------------ca-t--ttaat-gtc---tttga-gccac------------------agtgt
i Vulpes_lagopus.VulLag_flattened_line_12041             I 4 C 0
s Xerus_inauris.XerIna_scaffold_2302                        178328 41 -    224448 tgatcttag----gcag-at-ca-a--ttaat-gtc---tctga-gcccc------------------caagt
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32790 26 -     86975 ---------------------ca-c--ttaat-atc---tttga-gcaac------------------agtgt
i Zalophus_californianus.ZalCal_flattened_line_17732     I 4 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       5056 41 -     63895 tgactttag----ggag-at-tc-a--ttcat-gtc---tctga-gccac------------------aatat
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1431 41 +      3447 tgaccttag----gcgg-at-ca-t--ttaat-gtt---gctga-gccac------------------aatgt
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      10366 35 +     36723 CCT--GAA-----CT-CCA--AAACCATAGCATTGGCC-T-A-GATGG
s Acinonyx_jubatus.LLWD01001279.1                           816898 35 +   1699592 cct--g---aac-tt-g-aa-a-aCCACAACTTTGACC-T-A-GGTGG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     29099 34 +     63021 cct--G----AACGC-C-A--C-CCCACATTTTCAGAC-T-G-GATGT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419357 35 +  29979442 cct--g---aac-tt-c-aa-a-accatgactttgaac-t-a-gatgg
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            219364 35 +    347723 cct--g---aac-tt-c-aa-a-actatgactttgaac-t-a-gatgg
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                    21855 18 -     61208 ATT--G----AGTTC-C-A--A-ACCACA-------------------
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 3
s Allenopithecus_nigroviridis.k141_3755588                   51319 35 +     53615 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GATGG
i Allenopithecus_nigroviridis.k141_3755588               C 0 C 0
s Allochrocebus_lhoesti.k141_3412094                          3347 35 +     13857 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Allochrocebus_lhoesti.k141_3412094                     C 0 C 0
s Allochrocebus_preussi.k141_1993939                         19903 35 -     21945 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Allochrocebus_preussi.k141_1993939                     C 0 C 0
s Allochrocebus_solatus.k141_3554717                         21588 35 +     32033 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Allochrocebus_solatus.k141_3554717                     C 0 C 0
s Alouatta_belzebul.k141_1011583                             74841 35 -     84148 CCT--GAA-----CT-CCA--AAGCCACAGCATTGGCC-T-A-GATGG
i Alouatta_belzebul.k141_1011583                         C 0 C 0
s Alouatta_caraya.k141_1109140                               47095 35 -     78289 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Alouatta_caraya.k141_1109140                           C 0 C 0
s Alouatta_discolor.k141_2561099                             46511 35 +     55831 CCT--GAA-----CT-CCA--AAGCCACAGCGTTGGCC-T-A-GATGG
i Alouatta_discolor.k141_2561099                         C 0 C 0
s Alouatta_juara.k141_1687208                                44973 35 -     64179 CCT--GAA-----CT-CCA--AAACCACAGCGTTGGCC-T-A-GATGG
i Alouatta_juara.k141_1687208                            C 0 C 0
s Alouatta_macconnelli.k141_1277969                           2076 35 -      3959 CCT--GAA-----CT-CCA--AAACCACAGCGTTGGCC-T-A-GATGG
i Alouatta_macconnelli.k141_1277969                      C 0 C 0
s Alouatta_nigerrima.k141_376068                             43598 35 +     45454 CCT--GAA-----CT-CCA--AAACCACAGCGTTGGCC-T-A-GATGG
i Alouatta_nigerrima.k141_376068                         C 0 C 0
s Alouatta_palliata.k141_638677                              49247 35 +     70886 CCT--GAA-----CT-CCA--AAACCACAGCGTTGGCC-T-A-GATGG
i Alouatta_palliata.k141_638677                          C 0 C 0
s Alouatta_puruensis.k141_251022                             11417 35 +     30854 CCT--GAA-----CT-CCA--AAACCACAGCGTTGGCC-T-A-GATGG
i Alouatta_puruensis.k141_251022                         C 0 C 0
s Alouatta_seniculus.k141_928287                             35553 35 +     42133 CCT--GAA-----CT-CCA--AAACCACAGCGTTGGCC-T-A-GATGG
i Alouatta_seniculus.k141_928287                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                         1592575 35 +   2318259 cct--g---agc-tt-c-aa-a-gccacaactttgaac-t-a-gatgg
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      180979 35 -    412891 cct--g---agc-tc-c-aa-a-aCCACAACTTTGAAG-T-A-GAGAG
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53729 35 -     68529 cct--g---agc-tt-c-ga-a-gccacaactttgaac-t-a-gatgg
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 C 0
s Aotus_azarae.k141_887050                                    3760 35 +     17741 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Aotus_azarae.k141_887050                               C 0 C 0
s Aotus_griseimembra.k141_3192254                             4385 35 -     15923 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Aotus_griseimembra.k141_3192254                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                                674667 35 +   5030052 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_318729                               4661 35 -     16391 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Aotus_trivirgatus.k141_318729                          C 0 C 0
s Aotus_vociferans.k141_1514463                               4220 35 -     17186 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Aotus_vociferans.k141_1514463                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27825 34 -     32367 cct--g---agc-tc-c-a--a-gctacagcattagac-t-a-ggtag
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9484 35 -     15198 cct--g---agc-tc-t-aa-a-accacaacgtggaag-t-a-ggtgt
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                               277316 35 +  21539123 CCT--GAA-----CT-CCA--AAACCATAGCATTGGCC-T-A-GATGG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                              13481 35 +     48076 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_615173                                   8617 35 -     28759 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Ateles_chamek.k141_615173                              C 0 C 0
s Ateles_geoffroyi_a.k141_1283730                              36173 35 +     44353 CCT--GAA-----CT-CCA--AAACCATAGCATTGGCC-T-A-GATGG
i Ateles_geoffroyi_a.k141_1283730                          C 0 C 0
s Ateles_marginatus.k141_970259                              51543 35 -     71267 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Ateles_marginatus.k141_970259                          C 0 C 0
s Ateles_paniscus.k141_866194                                25601 35 -     33135 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Ateles_paniscus.k141_866194                            C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                    7967226 35 -  23207421 cct--g---agc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         3727 35 -     25979 cct--g---agc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93562 35 +    124022 cct--g---agc-tt-c-aa-a-gccacaactttgaac-t-a-gatgg
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                     36751 19 +    288883 cct--g---agc-tt-c-aa-a-GCCACA-------------------
i Bison_bison.KN261452.1                                 C 0 I 1
s Bos_indicus.CM003047.1                                  28423904 19 -  48749331 cct--g---agc-tt-c-aa-a-GCCACA-------------------
i Bos_indicus.CM003047.1                                 C 0 I 1
s Bos_mutus.JH880303.1                                      769505 19 +   1948126 cct--g---agc-tt-c-aa-a-GCCACA-------------------
i Bos_mutus.JH880303.1                                   C 0 I 1
s Bos_taurus.CM000203.6                                   27560050 19 -  45695690 cct--g---agc-tt-c-aa-a-GCCACA-------------------
i Bos_taurus.CM000203.6                                  C 0 I 1
s Bubalus_bubalis.KI419123.1                               1536731 19 -   4408762 cct--g---agc-tt-c-aa-a-GCCACA-------------------
i Bubalus_bubalis.KI419123.1                             C 0 I 1
s Cacajao_ayresi.k141_96119                                  10397 35 +     28062 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Cacajao_ayresi.k141_96119                              C 0 C 0
s Cacajao_calvus.k141_89051                                  45688 35 -     91139 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Cacajao_calvus.k141_89051                              C 0 C 0
s Cacajao_hosomi.k141_81245                                  23215 35 +     95584 CCT--GAA-----TT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         23128 35 +    119600 cct--gaa-----ct-cca--aaaCCACAGCATTGGCC-T-A-GATGG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Callibella_humilis.k141_1233062                            12750 35 +     18648 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Callibella_humilis.k141_1233062                        C 0 C 0
s Callimico_goeldii.k141_1609886                             12253 35 -     13885 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Callimico_goeldii.k141_1609886                         C 0 C 0
s Callithrix_geoffroyi.k119_459277                            4464 35 -      8861 CCT--GAA-----CT-CCA--AACCCACAGCATTGGCC-T-A-CATGG
i Callithrix_geoffroyi.k119_459277                       C 0 C 0
s Callithrix_jacchus.pat_scaffold_3                      165456806 35 + 189096842 CCT--GAA-----CT-CCA--AACCCACAGCATTGGCC-T-A-CATGG
i Callithrix_jacchus.pat_scaffold_3                      C 0 C 0
s Callithrix_kuhlii.k119_102356                               4380 35 +      8664 CCT--GAA-----CT-CCA--AACCCACAGCATTGGCC-T-A-CATGG
i Callithrix_kuhlii.k119_102356                          C 0 C 0
s Camelus_bactrianus.KN276810.1                            7635270 35 +  17673402 cct--g---agc-tc-c-aa-g-acgacaactttgaac-t-a-gatgg
i Camelus_bactrianus.KN276810.1                          C 0 I 505
s Camelus_dromedarius.KN272107.1                           4669571 35 +   7040546 cct--g---agc-tc-c-aa-g-acgacaactttgaac-t-a-gatgg
i Camelus_dromedarius.KN272107.1                         C 0 I 505
s Camelus_ferus.KB017975.1                                 1213269 35 +   1652518 cct--g---agc-tc-c-aa-g-acgacaactttgaac-t-a-gatgg
i Camelus_ferus.KB017975.1                               C 0 I 505
s CanFam4.chr16                                           42509296 35 +  60362399 cct--a---aac-tt-t-aa-a-accacaactttgacc-t-a-gatgg
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12931 35 -     23171 cct--a---aac-tt-t-aa-a-accacaactttgacc-t-a-gatgg
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                          226272 35 +   9314153 cct--a---aac-tt-t-aa-a-accacaactttgacc-t-a-gatgg
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            41619409 35 +  59632846 cct--a---aac-tt-t-aa-a-accacaactttgacc-t-a-gatgg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            45110990 35 -  63665305 cct--a---aac-tt-t-aa-a-accacaactttgacc-t-a-gatgg
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               27416579 35 -  46296322 cct--g---agc-tt-c-aa-a-gccacaactttgaac-t-a-gatgg
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 26598576 35 +  44709034 cct--g---agc-tt-c-aa-a-gccacaactttgaac-t-a-gatgg
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_26391                    2484 33 -     20114 cct--g---agc-tg-c-a--a-accaacacaccagac-t-a-gaca-
i Capromys_pilorides.CapPil_scaffold_26391               C 0 I 2
s Carlito_syrichta.NW_007259797.1                           274760 34 +    496798 CAT--AAG-----TT-T-A--AAACCACAGGGTTGGAC-T-A-GATGG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_107871               4368 35 +      9923 cct--g---agc-tc-c-aa-a-CCCGCAACTTCAAAG-T-A-GAGGT
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 C 0
s Castor_canadensis.CasCan_scaffold_39952                    31847 32 -     39886 --t--g---agc-tc-c-a--A-ACCACAACACTGGAA-G-A-GATGA
i Castor_canadensis.CasCan_scaffold_39952                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83579 34 -    217609 cc---a---agc-tc-c-aa-a-accacaattttgagc-t-a-ggtag
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_porcellus.DS562891.1                               5003883 33 +  23407841 ctt--a---agc-tc-c-a--g-accaacacattggac-t-a-gata-
i Cavia_porcellus.DS562891.1                             C 0 I 1
s Cavia_tschudii.CavTsc_scaffold_8919                          768 33 -    143979 ctt--a---agc-tc-c-a--g-accaacacattggac-t-a-gata-
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 1
s Cebuella_niveiventris.k141_592277                           7721 35 -     12580 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Cebuella_niveiventris.k141_592277                      C 0 C 0
s Cebuella_pygmaea.k141_145798                               45830 35 +     53515 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Cebuella_pygmaea.k141_145798                           C 0 C 0
s Cebus_albifrons.Contig27                                  376457 35 -  26074798 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1404781                               10526 35 -     34880 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Cebus_olivaceus.k141_1404781                           C 0 C 0
s Cebus_unicolor.k141_1654760                                69624 35 -     89041 cct--gaa-----ct-cca--aaaCCACAGCATTGGCC-T-A-CATGG
i Cebus_unicolor.k141_1654760                            C 0 C 0
s Cephalopachus_bancanus.k141_1140705                         2423 34 -     76265 cat--aag-----tt-t-g--aaaccacagggttggac-t-a-gatgg
i Cephalopachus_bancanus.k141_1140705                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          15496126 35 -  27778364 cct--g---agc-tc-c-aa-a-accacagctttgaac-c-a-gatgg
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22957 35 +     27315 cct--g---agc-tc-c-aa-a-accacagctttgaac-c-a-gatgg
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 C 0
s Cercocebus_atys.KQ010504.1                                144403 35 -   4669795 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCC-G-A-GATGG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_697306                          377 35 +      3297 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCC-G-A-GATGG
i Cercocebus_chrysogaster.k141_697306                    C 0 C 0
s Cercocebus_lunulatus.k141_2500334                           3575 35 -     14410 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCC-G-A-GATGG
i Cercocebus_lunulatus.k141_2500334                      C 0 C 0
s Cercocebus_torquatus.k141_2159127                          47957 35 -    148725 cct--gaa-----ct-cca--aaaCCGCAGCATCGGCC-G-A-GATGG
i Cercocebus_torquatus.k141_2159127                      C 0 C 0
s Cercopithecus_ascanius.k141_3120866                        30234 35 -     40656 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GATGC
i Cercopithecus_ascanius.k141_3120866                    C 0 C 0
s Cercopithecus_cephus.k141_4183004                          10193 35 +     20796 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GATGC
i Cercopithecus_cephus.k141_4183004                      C 0 C 0
s Cercopithecus_diana.k141_132293                            15307 35 -     17524 CCT--GAA-----CC-CCA--AAACCGCAGCATTGGCC-G-A-GATGC
i Cercopithecus_diana.k141_132293                        C 0 C 0
s Cercopithecus_hamlyni.k141_566925                          31040 35 -     34525 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GATGC
i Cercopithecus_hamlyni.k141_566925                      C 0 C 0
s Cercopithecus_lowei.k141_2101310                           14818 35 -     25376 CCT--GAA-----CT-CCA--AAACTGCAGCATTGGCC-G-A-GATGC
i Cercopithecus_lowei.k141_2101310                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                  367407 35 -  39242232 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                  273132 35 +  21565898 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_858615                        35499 35 -     45857 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGC
i Cercopithecus_neglectus.k141_858615                    C 0 C 0
s Cercopithecus_nictitans.k141_2995370                       30400 35 -     32606 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GATGG
i Cercopithecus_nictitans.k141_2995370                   C 0 C 0
s Cercopithecus_petaurista.k141_42573                         6555 35 +      8499 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GATGC
i Cercopithecus_petaurista.k141_42573                    C 0 C 0
s Cercopithecus_pogonias.k141_6079                           28960 35 +     70610 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGC
i Cercopithecus_pogonias.k141_6079                       C 0 C 0
s Cercopithecus_roloway.k141_3012935                         25920 35 +     36323 CCT--GAA-----CC-CCA--AAACCGCAGCATTGGCC-G-A-GATGC
i Cercopithecus_roloway.k141_3012935                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15803 35 -     19938 ccc--g---agc-gc-t-ga-a-accacagccttggac-t-a-gacgg
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 C 0
s Cheracebus_lucifer.k141_2312002                            11490 35 -     32913 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Cheracebus_lucifer.k141_2312002                        C 0 C 0
s Cheracebus_lugens.k141_1179667                             21903 35 -     40346 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Cheracebus_lugens.k141_1179667                         C 0 C 0
s Cheracebus_regulus.k141_471822                             22157 35 +    216457 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_890198                           21947 35 +     39636 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Cheracebus_torquatus.k141_890198                       C 0 C 0
s Chiropotes_albinasus.k141_1091259                          34038 34 -     52013 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-C-C-G-TGG
i Chiropotes_albinasus.k141_1091259                      C 0 C 0
s Chiropotes_israelita.k141_313004                           45028 35 -    112038 CCT--GGA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Chiropotes_israelita.k141_313004                       C 0 C 0
s Chiropotes_sagulatus.k141_1113111                          10578 35 +     34062 CCT--GGA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Chiropotes_sagulatus.k141_1113111                      C 0 C 0
s Chlorocebus_aethiops.ctg25                                346822 35 +  18827391 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_3063162                       13361 35 -     44032 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Chlorocebus_pygerythrus.k141_3063162                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                            308208 35 - 135778131 CCT--GAA-----CT-CCA--AAACTGCAGCATTGGCC-G-A-GATGG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2504 35 +     10270 cct--g---aac-tc-t-ga-a-accacagccttgaac-t-a-gatag
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            609981 35 -    839153 cct--g---aac-tc-t-ga-a-accacagccttgaac-t-a-gatag
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2725 35 -      4087 cca--a---agc-tc-t-aa-a-gctacagcgttgaac-t-a-gatgg
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 C 0
s Colobus_angolensis.KN981557.1                             412616 35 -   2368649 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GATGG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                      382498 35 - 200372422 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                               6051 35 -     84244 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           35811078 35 +  53390261 CCT--G----AGCTC-C-A-AA-GCCACAACTTTGCAC-T-T-GATGG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6617 35 -      8242 ACT--G----AGCTC-C-A-AA-ACCGCAACTTTGAAC-T-A-GATGG
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47791 34 -     83289 cct--g---agc-tc-c-a--a-accacattatcagac-t-a-gatgt
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                          213119312 34 - 224834208 cct--g---agc-tc-c-a--a-acaacattatctgac-t-a-gatgt
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_205242               229 36 +      5812 cct--g---ggc-tc-c-aaaa-atcacaactttgaat-t-a-gatgg
i Crocidura_indochinensis.CroInd_scaffold_205242         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              8239 35 +     87169 cct--g---aac-tt-a-aa-a-ACCACAGCTTTGCAC-T-A-GGTGG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650524 34 -   1526836 cct--g---agc-tc-c-a--a-acagcagcattggac-t-a-ggcag
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  23154 33 +     50838 cct--g---agc-tc-c-a--a-aCCAACACACCAGAG-T-A-GACA-
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12645 33 +     36344 cct--g---agc-tc-g-a--a-accaacacattggac-t-a-gaca-
i Cuniculus_paca.CunPac_flattened_line_7025              C 0 I 1
s Dasyprocta_punctata.DasPun_flattened_line_15900            32085 33 +     75252 cct--g---aac-tc-c-a--a-accaacacattggac-t-a-gaca-
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 1
s Dasypus_novemcinctus.JH564415.1                          2113547 35 -   2246927 ccc--g----agagc-c-ga-a-actgcagccttgaac-t-a-gacgg
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        18635638 35 -  35494412 cct--g---agc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                            11869361 35 -  20541912 cct--g---agc-tc-c-aa-a-accacagctttgaag-t-a-gacgt
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668396 35 -   1390856 cct--g----agatc-c-aa-a-accacaactttgaac-c-a-gatgg
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  143195 35 -    198055 cct--g---agc-tc-c-aa-a-accacaactttgaac-c-a-gatgg
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18955899 34 -  37912305 cct--g---agc-tc-t-g--a-cggacaatattagac-t-a-gatgg
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_77284                   1503 34 +     14058 cct--g---agc-tc-t-g--a-cggacaatattagac-t-a-gatgg
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_341948                  246 33 -      1676 cct--g---agc-tc-c-a--a-accaacacattggac-t-a-gata-
i Dolichotis_patagonum.DolPat_scaffold_341948            C 0 I 1
s Echinops_telfairi.JH980293.1                            62858854 36 - 111700974 cct-ta---aac-tc-t-ga-a-gccacggcgctgaac-c-a-gatgc
i Echinops_telfairi.JH980293.1                           C 0 C 0
s Eidolon_helvum.AWHC01266696.1                              10046 36 +     19438 cct--g---tccagt-t-ca-a-actacagctttgaac-t-a-gatga
i Eidolon_helvum.AWHC01266696.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       246365 35 -    607251 cct--g---agc-tt-c-aa-a-gccacaactttgaac-t-a-gatgg
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          35500 34 +    110024 CCT--G----AGCTC-C-A--A-ACAACATTATCAGAC-t-a-ggtgt
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01026522.1                           17421 34 +     18970 CCT--G----AGCTC-C-A--A-ACAACATTATCAGAC-T-A-GATGA
i Ellobius_talpinus.LOJH01026522.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               24925887 35 +  41312741 cct--a---aac-tt-c-aa-a-tccatgactttgaac-t-a-gatgg
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Eptesicus_fuscus.JH977646.1                             12583130 35 +  14770903 cct--g---ggc-tc-c-aa-a-accacaactttgaag-t-t-tatgg
i Eptesicus_fuscus.JH977646.1                            C 0 C 0
s Equus_asinus.JREZ01000139.1                              3045639 35 -   4378816 ctt--g---agc-tc-c-aa-a-accacaactttggac-t-a-gatgg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               21379569 35 +  39960074 ctt--g---agc-tc-c-aa-a-accacaactttggac-t-a-gatgg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                              415551 35 -    498745 ctt--g---agc-tc-c-aa-a-accacaactttggac-t-a-gatgg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3671818 23 +   7059049 CCT--G----AGACC-T-C-AA-ACCACAATTT---------------
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                               266350 35 +  21539334 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCT-G-A-GATGG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74841 35 -    133382 cct--g---agc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2563 35 +     25849 cct--g---agc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Felis_catus.CM001381.2                                 186250976 35 - 206538554 cct--g---aac-tt-g-aa-a-aCCACAACTTTGACC-T-A-GGTGG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                          185120932 35 - 205367284 CCT--G----AACTT-G-A-AA-ACCACAACTTTGACC-T-A-GGTGG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  1573 35 +     25330 CCT--G----AACTT-G-A-AA-ACCACAACTTTGACC-T-A-GGTGG
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                            2927080 32 -   3816255 c-c--G----AACTC-C-A--A-ACCAACACAGTGAAG-T-A-GACA-
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_51812                5435 35 -     28519 cct--g---agc-tc-c-a--acaccacagtgttggaa-c-a-gatgg
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2623 35 +    660261 cct--g---agc-tt-c-aa-a-gccacaactttgaac-t-a-gatgg
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_163929                            5440 34 -      6791 cct--g---aac-tc-t-a--a-accacagcactggac-t-a-gatgg
i Glis_glis.GliGli_scaffold_163929                       C 0 C 0
s Gorilla_beringei.k141_935316                                1449 35 +     34797 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Gorilla_beringei.k141_935316                           I 41 C 0
s Gorilla_gorilla.LT578336.1                                 76040 35 +  33314783 cct--gaa-----ct-cca--aaaccacagcattggcc-t-a-gatgg
i Gorilla_gorilla.LT578336.1                             I 41 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    7360 34 -     78134 cct--g---aac-tt-c-a--a-accacagcattggag-t-a-gatga
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585                34599 35 -    327341 cct--g---aac-tt-a-aa-a-ACCACAGCTTTGAAC-T-A-CGTGG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 16289 35 +     48891 cct--g---agc-tt-c-aa-a-gccacaactttgaac-t-a-gatgg
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                         1939529 33 -  22651954 cct--g---aac-tc-c-a--a-acaaacacattggag-t-a-gata-
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6586 34 +      8654 -ct--g---agc-cc-t-ga-a-gccgcaacattgaac-t-t-gatgg
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11676 35 -     36432 cct--g---agc-tc-c-aa-a-accacaactttgaac-t-a-gatgg
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_108494                429 35 -      8370 cct--g---agc-tc-c-aa-a-aCCACAACTCGGAAA-G-A-GGTAA
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 C 0
s Hoolock_leuconedys.ctg274                                    146007 35 -    630532 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-G-GATGG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  74289 24 +     83186 CCT--G----AACTT-C-A-AA-ACCACAGCTTT--------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75822 33 +    143317 cct--g---acc-tc-c-a--a-accaatacattggac-t-a-gata-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 1
s Hylobates_agilis.k141_1155965                               9052 35 +     12352 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-G-GATGG
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              16239 35 +     55766 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-G-GATGG
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055769 35 + 191637585 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-G-GATGG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804647 35 +  11177569 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-G-GATGG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11687 29 -    135385 cct--g---agc-tc-c-a--a-ac-----taatacac-t-a-gacag
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                     390937 34 +   7955117 cct--g---agc-tc-c-a--a-gctacagcattcaac-t-a-gatag
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13742 35 -     16823 cct--g---agc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 C 0
s Jaculus_jaculus.JH725527.1                               1243403 18 +   9596543 ACT--G----AGCTC-C-A--A-ACCACA-------------------
i Jaculus_jaculus.JH725527.1                             I 4 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75580 35 -     97402 cct--g---agc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_246028                          45863 35 +    110728 CCT--GAA-----TT-CCA--AAACCACAGCGTTGGCC-T-A-GATGG
i Lagothrix_lagothricha.k141_246028                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_26245                    36541 36 -     49555 cct--g---ggc-tc-c-aa-a-aCCACAGCTTTGAAG-TTT-TATGG
i Lasiurus_borealis.LasBor_scaffold_26245                I 41 n 35
s Leontocebus_fuscicollis.k141_3470480                        1309 35 -     23187 CCC--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CGTGG
i Leontocebus_fuscicollis.k141_3470480                   C 0 C 0
s Leontocebus_illigeri.k141_2759473                           1623 35 -     14280 CCC--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CGTGG
i Leontocebus_illigeri.k141_2759473                      C 0 C 0
s Leontocebus_nigricollis.k141_1320036                        1263 35 +      3713 CCC--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CGTGG
i Leontocebus_nigricollis.k141_1320036                   C 0 C 0
s Leontopithecus_chrysomelas.k141_3286424                     1449 35 +      8855 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Leontopithecus_chrysomelas.k141_3286424                C 0 C 0
s Leontopithecus_rosalia.k141_1583055                         6250 35 -     13645 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Leontopithecus_rosalia.k141_1583055                    C 0 C 0
s Leptonychotes_weddellii.KB714746.1                        817159 35 -   3914936 cct--g---aac-tt-c-aa-a-accatgactttgagt-t-a-gatgg
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_56121                     23436 35 +     24238 ctt--g---agc-tt-c-aa-a-accacagctatggac-t-a-gatgg
i Lepus_americanus.LepAme_scaffold_56121                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             344924 35 +    662738 cct--g---agc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                               337278 36 -   1826925 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-AGGATGG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loxodonta_africana.GL010049.1                           39088327 34 +  43346337 -ct--g---agc-cc-t-g-ta-gccacaacgttgaac-t-a-gatgg
i Loxodonta_africana.GL010049.1                          C 0 C 0
s Lycaon_pictus.CM007581.1                                41618564 35 +  59628241 cct--a---aac-tt-t-aa-a-accacaactttgacc-t-a-gatgg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_1757516                              48677 35 -     61512 cct--gaa-----ct-cca--aaaCCGCAGCATCGGCT-G-A-GATGG
i Macaca_arctoides.k141_1757516                          C 0 C 0
s Macaca_assamensis.Contig5                                 376339 35 -  60120075 cct--gaa-----ct-cca--aaaCCGCAGCATCGGCT-G-A-GATGG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_263443                                28607 35 +     30207 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCT-G-A-GATGG
i Macaca_cyclopis.k119_263443                            C 0 C 0
s Macaca_fascicularis.k141_1617581                            3445 35 -      5035 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCT-G-A-GATAG
i Macaca_fascicularis.k141_1617581                       C 0 C 0
s Macaca_fuscata.k119_546792                                 28560 35 +     30527 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCT-G-A-GATGG
i Macaca_fuscata.k119_546792                             C 0 C 0
s Macaca_leonina.k141_321385                                 39736 35 -     50087 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCT-G-A-GATGG
i Macaca_leonina.k141_321385                             C 0 C 0
s Macaca_maura.k141_1103459                                  49481 35 +     51645 CTT--GAA-----CT-CCA--AAACCGCAGCATCGGCT-G-A-GATGG
i Macaca_maura.k141_1103459                              C 0 C 0
s Macaca_mulatta.NC_041758.1                                418683 35 - 187317192 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCT-G-A-GATGG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                              402914 35 +  25927173 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCT-G-A-GATGG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_2818840                                  52085 35 -     62418 cct--gaa-----ct-cca--aaaCCGCAGCATCGGCT-G-A-GATGG
i Macaca_nigra.k141_2818840                              C 0 C 0
s Macaca_radiata.k141_2139468                                 4616 35 +     14901 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCT-G-A-GATGG
i Macaca_radiata.k141_2139468                            C 0 C 0
s Macaca_siberu.k141_2185972                                 48558 35 +     59329 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCT-G-A-GATGG
i Macaca_siberu.k141_2185972                             C 0 C 0
s Macaca_silenus.Contig273                                  274465 35 +    668171 cct--gaa-----ct-cca--aaaCCGCAGCATCGGCT-G-A-GATGG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_45532                                  3097 35 -      5049 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCT-G-A-GATGG
i Macaca_thibetana.k99_45532                             C 0 C 0
s Macaca_tonkeana.k141_339739                                 6264 35 +     17132 CTT--GAA-----CT-CCA--AAACCGCAGCATCGGCT-G-A-GATGG
i Macaca_tonkeana.k141_339739                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                227019 35 -    270270 cct--g---tc-tgt-t-ca-a-actacaactttgaac-t-a-gaagg
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                        325747 35 +  24302211 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               360578 35 -    752769 cct--gaa-----ct-cca--aaaCCGCAGCATCGGCC-G-A-GATGG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                             679104 35 -    737560 CCT--G----AGCTC-C-A-AA-ACCACAACTCTGAAC-T-C-GATGG
i Manis_javanica.JSZB01003497.1                          I 1907 C 0
s Manis_pentadactyla.KN006162.1                             226387 35 +    317179 CCT--G----AGCTC-C-A-AA-ACCACAACTCTGAAC-T-C-GATGG
i Manis_pentadactyla.KN006162.1                          I 1896 C 0
s Marmota_marmota.CZRN01000018.1                           7505137 34 +  40650429 cct--g---agc-tc-c-a--a-gctacagcattcaac-t-a-gatag
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                       154333 36 +    207569 act--g---agc-tc-c-aa-a-accacagctttgaactt-a-gatga
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             29899 34 -     74585 cct--g---aac-tt-c-aa-a-tccatgactttt-ac-t-a-gatgg
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53495 34 -    140813 CCC--A----AGCCC-C-A--T-TCCACATTATTGGAC-T-A-GACGT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         17433606 34 +  29670104 CCT--G----AGCTC-C-A--A-ACAACATTATCTGAC-T-A-GATAT
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_6114                     91207 35 +     93471 cct--g---agc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 C 0
s Mico_argentatus.k141_582562                                12859 35 +     17804 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Mico_argentatus.k141_582562                            C 0 C 0
s Mico_humeralifer.k141_1189820                                586 35 +      5551 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Mico_humeralifer.k141_1189820                          C 0 C 0
s Mico_schneideri.k141_1877700                                     21663 33 -     26561 --T--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Mico_schneideri.k141_1877700                                 C 0 C 0
s Microgale_talazaci.MicTal_scaffold_6613                    50037 36 +    145209 ctt-ca---agc-tc-t-ga-a-gccactgcactgaac-t-a-aatga
i Microgale_talazaci.MicTal_scaffold_6613                C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_2233                188940 35 +    200668 cct--g---agc-tc-c-aa-a-accacaactttgaag-t-a-gatgt
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 C 0
s Microtus_ochrogaster.CM001695.1                         15966908 34 +  27267610 CCT--G----AGCGC-C-A--A-ACAACATTATCAGAC-T-A-GGTGC
i Microtus_ochrogaster.CM001695.1                        C 0 C 0
s Miniopterus_natalensis.LDJU01000034.1                    6368760 35 -   8254450 cct--g---agc-tc-c-aa-a-accacaactttgaag-t-t-tatgg
i Miniopterus_natalensis.LDJU01000034.1                  C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46491 35 -     48117 cct--g---agc-tc-c-aa-a-accacaactttgaag-t-t-tatgg
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 C 0
s Miopithecus_ogouensis.k141_1534655                         25846 35 -     27822 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GATGG
i Miopithecus_ogouensis.k141_1534655                     C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12392 35 +     27589 cct--g---aac-tt-c-aa-a-accatgactttgagc-t-a-gatgg
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                   363316 35 +    437263 cct--g---agc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183394 35 +    366855 cct--g---aac-tc-c-aa-a-accacaactttgaag-t-a-gatgt
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32521 35 -     82753 cct--g---agc-tt-c-aa-a-gctacaactttgaac-t-a-gatgg
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   22358 35 -     63510 CCT--G----AACTT-A-A-AA-ACCACAGCTTTGAAC-T-A-CGTGG
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Murina_feae.MurFea_scaffold_17764                          45747 32 +     47283 cct--G----GACTC-C-A-AA-ACCACAACTTTT----T-T-TATGG
i Murina_feae.MurFea_scaffold_17764                      C 0 C 0
s Mus_caroli.LT608237.1                                   35598320 27 + 120012414 -------------GC-C-A--A-ATCCCATTATTAAAC-T-A-CATGT
i Mus_caroli.LT608237.1                                  C 0 C 0
s Mus_musculus.chr8                                       41691636 27 + 129401213 -------------GC-C-A--A-ATCCCATTATCAAAC-T-A-CATGT
i Mus_musculus.chr8                                      C 0 C 0
s Mus_pahari.LT608297.1                                   58219596 27 +  89631738 -------------GC-C-A--A-ATCCCATTATCAGAC-T-A-CATGT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Mus_spretus.CM004101.1                                  39500555 27 + 130317789 -------------GC-C-A--A-ATCCCATTATCAAAC-T-A-CATGT
i Mus_spretus.CM004101.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3450 27 -    124358 cct--G-----ACTC-C-A--A-ACCACAGCA-------T-A-GATGA
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 C 0
s Mustela_putorius.JH418006.1                             14358849 35 +  14710649 cct--a---aac-tt-c-aa-a-tccatggctttgaac-t-a-gatgg
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1540 33 -     27262 CCT--G----AGCTG-C-A--A-ACTAACACACTAGAC-T-A-GACA-
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 I 2
s Myotis_brandtii.KE162005.1                               9797752 34 +  10118263 cct--g--gtc--tc---aa-a-accacaactttgaag-t-t-tatgg
i Myotis_brandtii.KE162005.1                             C 0 C 0
s Myotis_davidii.KB100139.1                                4391926 35 +   6019432 cct--g---ggc-tc-c-aa-a-accacaactttgaag-t-t-tatgg
i Myotis_davidii.KB100139.1                              C 0 C 0
s Myotis_lucifugus.GL429869.1                               387965 34 +   4330536 cct--g--gtc--tc---aa-a-atcacaactttgaag-t-t-tatgg
i Myotis_lucifugus.GL429869.1                            C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6752 35 +     18357 cct--G----GGCTC-C-A-AA-ACCACAACTTTGAAG-G-T-TATGG
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 C 0
s Nannospalax_galili.KL204047.1                             950521 34 +   3037898 cct--g---agc-cc-c-a--a-accacattattggag-t-a-gatgt
i Nannospalax_galili.KL204047.1                          C 0 C 0
s Nasalis_larvatus.k141_1350636                              32626 35 +     34575 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GATGG
i Nasalis_larvatus.k141_1350636                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                11469839 35 -  31847680 cct--g---aac-tt-c-aa-a-accatgactttgagc-t-a-gatgg
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1235974 35 -   7148211 cct--g---acc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131665 35 -    149072 cct--g---agc-tc-c-aa-a-accacaactttgaag-t-a-aatgt
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 C 0
s Nomascus_annamensis.k141_1771965                           56942 34 -    132029 CCT--GAA-----CT-CCA--AA-CCACAGCATTGGCC-T-G-GATGG
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              13037 34 -     16345 CCT--GAA-----CT-CCA--AA-CCACAGCATTGGCC-T-G-GATGG
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18926 34 +     22201 CCT--GAA-----CT-CCA--AA-CCACAGCATTGGCC-T-G-GATGG
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8417156 34 -  22158432 CCT--GAA-----CT-CCA--AA-CCACAGCATTGGCC-T-G-GATGG
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29331 34 -     54323 CCT--GAA-----CT-CCA--AA-CCACAGCATTGGCC-T-G-GATGG
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                202269 35 +   9404916 ctt--a---aac-tt-c-aa-a-accacaactttgacc-t-a-gatgg
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Octodon_degus.JH651603.1                                11059815 33 -  11899542 cct--g---agc-tc-c-a--a-aCCAACACAGCAGAG-T-A-GACA-
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                             1455608 35 +   2017862 cct--g---aac-tt-c-aa-a-accatgactttgagc-t-a-gatgg
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         442917 35 -    630418 cct--g---agc-tt-c-aa-a-gccacaactttgaac-t-a-gatgg
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                          22574 35 +    150152 ccg--g---agc-tt-c-aa-a-gccacaactttgaac-t-a-gatgg
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97537 31 -    140218 cct--g---agc-tt-c-a--a-a---cattatcagac-t-a-ggtgc
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                    8109 34 -     41509 CCT--G----AGCTC-C-A--A-ACAACATTATCATAC-T-G-GATGT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  8106387 35 +  10937097 cct--g---agc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3375 35 +     11607 cct--g---agc-tc-t-ga-a-gccacaatattgaac-t-a-gatgg
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                       107109725 35 - 174332312 cat--g---agc-tt-c-aa-a-accacagctatggac-t-a-gatgg
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                        43431 35 +    559221 CCT--A----AACTT-C-A-AA-ACCACAACTTTGACC-T-G-GATGG
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   26411315 35 -  44047080 cct--g---agc-tt-c-aa-a-gccacaactttgaac-t-a-gatgg
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_67953                      11938 35 +     17875 cct--g---agc-tt-c-aa-a-gccacaactttgaac-t-a-gatgg
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 C 0
s Pan_paniscus.AJFE02001037.1                                  898 35 +      1186 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Pan_paniscus.AJFE02001037.1                            C 0 n 0
s Pan_troglodytes.CM009242.2                               1477518 35 - 189151597 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-GATGG
i Pan_troglodytes.CM009242.2                             I 133 n 100
s Panthera_onca.PanOnc_flattened_line_3271                   28906 35 -    230217 CCT--G----AACTT-G-A-AA-ACCACAACTTTGACC-T-A-GGTGG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                              18466147 35 -  18783137 cct--g---aac-tt-g-aa-a-aCCACAACTTTGACT-T-A-GGTGG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               3976746 35 +   8748460 ccC--G----AACTT-G-A-AA-ACCACAACTTTGACC-T-A-GGTGG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1622832 35 +   2937107 cct--g---agc-tt-c-aa-a-gccacaactttgaac-t-a-gatgg
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                   246762 35 - 183742232 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCC-G-A-GATGG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_1507553                            13047 35 +     21308 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCT-G-A-GATGG
i Papio_cynocephalus.k141_1507553                        C 0 C 0
s Papio_hamadryas.Contig39                                  295790 35 -  20919399 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCC-G-A-GATGG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_2214839                                  25689 35 -     27687 CCT--GAA-----CT-CTA--AAACCGCAGCATCGGCC-G-A-GATGG
i Papio_kindae.k141_2214839                              C 0 C 0
s Papio_papio.k141_3538738                                    2366 35 +     10553 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCC-G-A-GATGG
i Papio_papio.k141_3538738                               C 0 C 0
s Papio_ursinus.k141_5784434                                  2327 35 -     10386 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCC-G-A-GATGG
i Papio_ursinus.k141_5784434                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     19024 35 +     78924 CCT--G----AATTT-C-A-AG-ACCACAGCTTTGAAC-T-A-GGTGG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_89005        8008 34 +      9367 cca--g---agc-tc-t-g--a-aggacaacatcagac-t-a-gatgt
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                         251261 34 +  18517816 cct--g---agc-tc-c-a--a-acaacattatcagac-t-g-gatgt
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159               7908 35 -     63832 cct--g---acc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                            6012 35 +     55023 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GAAGC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                         5535 35 -     89929 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GAAGC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                            6123 35 +     40849 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GAAGC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257852 35 +  14605196 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GAAGC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             8243 35 +     22231 cct--G----GGCTC-C-A-AA-ACCACAACTTTGAAG-T-T-TATGG
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 C 0
s Pithecia_albicans.k141_1239476                             67378 35 +    207309 TCT--GAA-----CT-CCA--AAACCACAGCATGGGCC-T-A-GATGG
i Pithecia_albicans.k141_1239476                         C 0 C 0
s Pithecia_chrysocephala.k141_785207                          8473 35 -     25401 CCT--GAA-----CT-CCA--AAACCACAGCATGGGCC-T-A-GATGG
i Pithecia_chrysocephala.k141_785207                     C 0 C 0
s Pithecia_hirsuta.k141_640380                               34219 35 +     58159 TCT--GAA-----CT-CCA--AAACCACAGCATGGGCC-T-A-GATGG
i Pithecia_hirsuta.k141_640380                           C 0 C 0
s Pithecia_mittermeieri.k141_1280039                         34495 35 +     63561 TCT--GAA-----CT-CCA--AAACCACAGCATGGGCC-T-A-GATGG
i Pithecia_mittermeieri.k141_1280039                     C 0 C 0
s Pithecia_pissinattii.k141_878371                           34250 35 +     51148 TCT--GAA-----CT-CCA--AAACCACAGCATGGGCC-T-A-GATGG
i Pithecia_pissinattii.k141_878371                       C 0 C 0
s Pithecia_pithecia.tarseq_165                              559226 35 -   4542175 TCT--GAA-----CT-CCA--AAACCACAGCATGGGCC-T-A-GATGG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1369553                           34234 35 +     51125 TCT--GAA-----CT-CCA--AAACCACAGCATGGGCC-T-A-GATGG
i Pithecia_vanzolinii.k141_1369553                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_83166            5156 35 +     19503 cct--g---agc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       10664 35 +     39866 CCT--GAA-----CT-CCA--AAACCACAGCCTTGGCC-T-A-GATGG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_862875                          5746 35 -      9282 CCT--GAA-----CT-CCA--AAACCACAGCCTTGGCC-T-A-GATGG
i Plecturocebus_brunneus.k141_862875                     C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       45150 35 -     87950 CCT--GAA-----CT-CCA--AAACCACAGCCTTGGCC-T-A-GATGG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     45544 35 -     88961 CCT--GAA-----CT-CCA--AAACCACAGCCTTGGCC-T-A-GATGG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         10242 35 -     39403 CCT--GAA-----CT-CCA--AAACCACAGCCTTGGCC-T-A-GATGG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          45194 35 +     87928 CCT--GAA-----CT-CCA--AAACCACAGCCTTGGCC-T-A-GATGG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         10241 35 -     60166 CCT--GAA-----CT-CCA--AAACCACAGCCTTGGCC-T-A-GATGG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      17162 35 -     67232 CCT--GAA-----CT-CCA--AAACCACAGCCTTGGCC-T-A-GATGG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          45094 35 -     90634 CCT--GAA-----CT-CCA--AAACCACAGCCTTGGCC-T-A-GATGG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          46561 35 +     89403 CCT--GAA-----CT-CCA--AAACCACAGCCTTGGCC-T-A-GATGG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                   182699 35 - 189387572 CCT--GAA-----CT-CCA--AAACCACAGCGTTGACC-T-A-AATGG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197441 35 -   9816681 cct--gaa-----ct-cca--aaaCCACAGCGTTGTCC-T-A-AATGG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              31210 35 +     69807 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              48393 35 -     80239 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_128773                 3118 34 -     12774 -ct--g---agc-cc-t-ga-a-gccgcaacactgaac-t-t-gatgg
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 C 0
s Psammomys_obesus.NESX01036366.1                            41028 34 +     52041 ccc--a---agc-cc-t-a--t-tctacattattggac-t-a-gatgt
i Psammomys_obesus.NESX01036366.1                        C 0 C 0
s Pteronotus_parnellii.KE847780.1                            56024 35 -     66298 cct--g---agc-tc-c-aa-a-accacaacttcgaag-a-a-gatgt
i Pteronotus_parnellii.KE847780.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8384 35 -     18639 ctt--a---aac-tt-c-aa-a-tccatgactttgaac-t-a-gatgg
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 C 0
s Pteropus_alecto.KB030862.1                               5844594 36 -  28871421 cct--g---tctagt-t-ca-a-accacaattttaaac-t-a-gatga
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             3541110 36 -   4952924 cct--g---tctagt-t-ca-a-accacaattttaaac-t-a-gatga
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            18103139 35 +  38429054 cct--g---aac-tt-g-aa-a-aCCACAACTTTGACC-T-A-GGTGG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             30579 35 +     91421 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                  157130 35 -   7812017 cct--gaa-----ct-cca--aaaCCGCAGCATCGGCC-G-A-GATGG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             11430 35 +     72585 cct--gaa-----ct-cca--aaaCCGCAGCATCGGCC-G-A-GATGG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5435 35 -     55207 cct--g---agc-tt-c-aa-a-gccacaactttgaac-t-a-gatag
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 37026209 27 -  90668790 -------------GC-C-A--A-ATCACATTATCAGAC-T-A-CATGT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918480 35 +   3329780 cct--g---agc-tc-c-aa-a-accacaactttgaac-g-a-ggtaa
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_778604                             5036 35 +      7119 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Rhinopithecus_bieti.k119_778604                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                    104125706 35 + 195417433 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GATGG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                             239878 35 -   7961872 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79340 36 -    116970 cct--g---tctagt-t-ca-a-accacgactttgaac-t-a-gatga
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saguinus_bicolor.k141_161125                                9935 35 +     12412 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-C-C-CGTGG
i Saguinus_bicolor.k141_161125                           C 0 C 0
s Saguinus_geoffroyi.k141_356064                              1257 35 +      9876 CCT--GAA-----CT-CCA--AAACCACAGCATGGGCC-C-C-CGTGG
i Saguinus_geoffroyi.k141_356064                         C 0 C 0
s Saguinus_imperator.k141_2710097                            16853 35 -     24931 CCT--GAA-----CT-CCA--AACCCACAGCATTGGCA-C-A-CGTGG
i Saguinus_imperator.k141_2710097                        C 0 C 0
s Saguinus_inustus.k141_4502137                               1732 35 +      4564 CCT--GAA-----CT-CCA--AACCCACAGCATTGGCC-C-A-CGTGG
i Saguinus_inustus.k141_4502137                          C 0 C 0
s Saguinus_labiatus.k141_264497                               4537 35 -      7443 CCT--GAA-----CT-CCA--AACCCACAGCATTGGCC-C-A-CGTGG
i Saguinus_labiatus.k141_264497                          C 0 C 0
s Saguinus_midas.LG03                                       395570 34 - 209938924 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-C-C--GTGG
i Saguinus_midas.LG03                                    C 0 C 0
s Saguinus_mystax.k141_6319370                                2154 35 +     10149 CCT--GAA-----CT-CCA--AACCCACAGCATTGGCC-C-A-CGTGG
i Saguinus_mystax.k141_6319370                           C 0 C 0
s Saguinus_oedipus.k141_1368863                               1498 35 +     10417 CCT--GAA-----CT-CCA--AAACCACAGCATGGGCC-C-C-CGTGG
i Saguinus_oedipus.k141_1368863                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14886 35 +     16473 cct--g---agc-tt-c-aa-a-gtcacaactttgaac-t-a-gatgg
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                       1111625 35 + 121099817 CTT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_1467335                       33194 35 -     47369 ctt--gaa-----ct-cca--aaaccacagcattggcc-t-a-catgg
i Saimiri_cassiquiarensis.k141_1467335                   C 0 C 0
s Saimiri_macrodon.k141_1173117                              33577 35 -     79414 ctt--gaa-----ct-cca--aaaccacagcattggcc-t-a-catgg
i Saimiri_macrodon.k141_1173117                          C 0 C 0
s Saimiri_oerstedii.k141_245838                              30268 35 -     34454 ctt--gaa-----ct-cca--aaaccacagcattggcc-t-a-catgg
i Saimiri_oerstedii.k141_245838                          C 0 C 0
s Saimiri_sciureus.k141_1467173                              17670 35 -     22428 ctt--gaa-----ct-cca--aaaccacagcattggcc-t-a-catgg
i Saimiri_sciureus.k141_1467173                          C 0 C 0
s Saimiri_ustus.k141_360372                                  32824 35 -     47109 ctt--gaa-----ct-cca--aaaccacagcattggcc-t-a-catgg
i Saimiri_ustus.k141_360372                              C 0 C 0
s Sapajus_apella.ctg103                                     240847 35 +   5703754 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_796559                          10438 35 +     21866 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-A-CATGG
i Sapajus_macrocephalus.k141_796559                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122929 35 +    313613 cct--g---agc-tc-c-aa-a-accacagctttgaac-t-t-gatgg
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_583282                          2010 35 +     11297 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Semnopithecus_entellus.k141_583282                     C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                      32403 35 +     58920 cct--gaa-----ct-cca--aaaCTGCAGCATTGGCC-G-A-GATGG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                           18901 35 -     45317 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_714795                            26559 35 -     42441 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GATGG
i Semnopithecus_priam.k141_714795                        C 0 C 0
s Semnopithecus_schistaceus.k141_1669243                      4200 35 -      6251 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Semnopithecus_schistaceus.k141_1669243                 C 0 C 0
s Semnopithecus_vetulus.k141_244474                          32323 35 -     48123 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Semnopithecus_vetulus.k141_244474                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    53084 34 +     77746 cct--g---agc-tc-c-a--a-ataacattatcagac-t-a-gatat
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126            1867689 35 -   1910179 cct--g---agc-ac-c-aa-a-accacaacttagggc-t-a-aatga
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                 4674906 34 +  18376816 cct--g---tgc-tc---aa-a-accacaactttgaac-t-a-gacgt
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1872500 34 +   3870691 cct--g---agc-tc-c-a--a-gctacagcattcaac-t-a-gatag
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             17070 35 -     97271 cct--g---aac-tt-c-aa-a-accatgactttgaac-t-a-gatgg
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629             129234 35 +    196729 cct--g---aac-tt-a-aa-a-ACCACAGCTTTGAAC-T-A-CGTGG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                    6648527 35 +  69701581 ctt--g---agc-tc-c-aa-a-accacagttttgaac-t-a-ggtgg
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                       394399 35 +   1523678 CCT--GAA-----CT-CCA--AAACCACAGCATTGGCC-T-G-GATGG
i Symphalangus_syndactylus.tarseq_199                    I 1 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17941 35 +     22964 cct--a---agc-tc-c-aa-a-atcacaacttcgaag-t-t-tatgg
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 C 0
s Tapirus_indicus.TapInd_scaffold_7432                      195360 35 +    199430 ccc--g---agc-tc-c-aa-a-accacaactttgaac-t-g-gatgg
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    109340 35 -    539355 ccc--g---agc-tc-c-aa-a-tccacaactttgaac-t-g-gatgg
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_1733899                                4951 34 +      9917 cct--aag-----tt-c-g--aaaccacagggttggac-g-a-gatgg
i Tarsius_lariang.k141_1733899                           C 0 C 0
s Tarsius_wallacei.k141_226975                               11739 20 +     20590 -------------------------CACAGGGTTGGAC-T-A-GATGG
i Tarsius_wallacei.k141_226975                           C 0 C 0
s Theropithecus_gelada.CM009954.1                           356573 35 - 186847797 CCT--GAA-----CT-CCA--AAACCGCAGCATCGGCC-G-A-GATGG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              29142 33 -     33621 cct--G----AGTTC-C-A--A-ACCAACCCACTAGAC-T-A-GATA-
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          C 0 I 1
s Tolypeutes_matacus.TolMat_scaffold_31955                   22915 35 -     31044 ccc--g----agggc-t-ga-a-agcactgccttgaac-t-a-gatgg
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    484270 35 -    610378 cct--g---agc-tc-t-aa-a-accacaactttgaag-t-a-gacgt
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 C 0
s Trachypithecus_auratus.k141_1189070                        24312 35 +     26378 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Trachypithecus_auratus.k141_1189070                    C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     37110 35 -     78344 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_180416                       23637 35 +     25722 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Trachypithecus_cristatus.k141_180416                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      32066 35 -     62838 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GATGG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_1001272                           32057 35 +     46913 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Trachypithecus_geei.k141_1001272                       C 0 C 0
s Trachypithecus_germaini.k141_57262                         12795 35 -     28527 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Trachypithecus_germaini.k141_57262                     C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      33997 35 -     64340 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          32035 35 -     63452 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_96450                    13486 35 +     22490 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GATGG
i Trachypithecus_leucocephalus.k141_96450                C 0 C 0
s Trachypithecus_melamera.k141_750785                         1452 35 +      9911 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GATGG
i Trachypithecus_melamera.k141_750785                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                         1247 35 -     33539 CCT--GAA-----CT-CCA--AAACCGCAGCATTGGCC-G-A-GATGG
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                             259006 35 -   6242583 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_2622778                        5025 35 +     19340 cct--gaa-----ct-cca--aaaCCGCAGCATTGGCC-G-A-GATGG
i Trachypithecus_pileatus.k141_2622778                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                   178130 35 -    200418 cct--g---agc-tt-t-aa-a-accacagctttgaac-t-a-gatgg
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            6485925 33 -  10818551 -ct--g---agc-cc-t-ga-a-gccacagtgttgaac-t-a-gatg-
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              1840182  4 -   4065304 tct--a------------------------------------------
i Tupaia_chinensis.KB320699.1                            C 0 N 0
s Tupaia_tana.TupTan_flattened_line_394                      14257  4 -     70247 tct--a------------------------------------------
i Tupaia_tana.TupTan_flattened_line_394                  C 0 N 0
s Tursiops_truncatus.MRVK01000835.1                       17369511 35 -  33153633 cct--g---agc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7706 35 -     21056 cct--g---ac-ttc-c-aa-a-aCCACGACTTTGAAC-T-T-GATGG
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                                185811 35 +   5085361 cct--g---aac-tt-c-aa-a-accatgactttgaac-t-a-gatgg
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Vicugna_pacos.KN270157.1                                   80642 35 +   5488506 cct--g---agc-tc-c-aa-g-acgacaactttgaac-t-a-gatgG
i Vicugna_pacos.KN270157.1                               C 0 I 505
s Vulpes_lagopus.VulLag_flattened_line_12041                109163 35 -    112863 cct--a---aac-tt-c-aa-a-accacaactttgacc-t-a-gatgg
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                        178369 34 -    224448 ttt--g---agc-tc-c-a--a-gctacagcattcgac-t-a-gatag
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32816 35 -     86975 cct--g---aac-tt-c-aa-a-accatgactttgagc-t-a-gatgg
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       5097 18 -     63895 act--g---agc-tc-c-a--a-aCCACA-------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1472 35 +      3447 cct--g---agc-tc-c-aa-a-accacagctttgaac-t-a-gatgg
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 C 0
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      10401 65 +     36723 TT-TCTTaggcc-tct-ctttgtgtcaggaattggtgagttcttggtctcactgacttcaagaatgaa
s Acinonyx_jubatus.LLWD01001279.1                           816933 18 +   1699592 TG-TCTGAGACC-TATCCTG------------------------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 19385
s Acomys_cahirinus.AcoCah_scaffold_21377                     29133 18 +     63021 TT-GCTTAGGTT-TCAAGTG------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 N 0
s Ailuropoda_melanoleuca.LNAT01000098.1                   20419392 18 +  29979442 tc-tctTATGCC-TATCCtg------------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 N 0
s Ailurus_fulgens.LNAC01001112.1                            219399 18 +    347723 tc-tcttagacc-TATCCTG------------------------------------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 N 0
s Allactaga_bullata.AllBul_scaffold_20030                    21876 18 -     61208 TT-TCTTAGATT-TCTACTG------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_20030                I 3 N 0
s Allenopithecus_nigroviridis.k141_3755588                   51354 17 +     53615 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Allenopithecus_nigroviridis.k141_3755588               C 0 N 0
s Allochrocebus_lhoesti.k141_3412094                          3382 17 +     13857 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Allochrocebus_lhoesti.k141_3412094                     C 0 N 0
s Allochrocebus_preussi.k141_1993939                         19938 17 -     21945 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Allochrocebus_preussi.k141_1993939                     C 0 N 0
s Allochrocebus_solatus.k141_3554717                         21623 17 +     32033 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Allochrocebus_solatus.k141_3554717                     C 0 N 0
s Alouatta_belzebul.k141_1011583                             74876 14 -     84148 TG-TCTTAGGAT-TCT----------------------------------------------------
i Alouatta_belzebul.k141_1011583                         C 0 N 0
s Alouatta_caraya.k141_1109140                               47130 17 -     78289 TG-TCTTAGGAT-TCTCC-T------------------------------------------------
i Alouatta_caraya.k141_1109140                           C 0 N 0
s Alouatta_discolor.k141_2561099                             46546 14 +     55831 TG-TCTTAGGAT-TCT----------------------------------------------------
i Alouatta_discolor.k141_2561099                         C 0 N 0
s Alouatta_juara.k141_1687208                                45008 14 -     64179 TG-TCTTAGGAT-TCT----------------------------------------------------
i Alouatta_juara.k141_1687208                            C 0 N 0
s Alouatta_macconnelli.k141_1277969                           2111 17 -      3959 TG-TCTTAGGAT-TCTCC-T------------------------------------------------
i Alouatta_macconnelli.k141_1277969                      C 0 N 0
s Alouatta_nigerrima.k141_376068                             43633 14 +     45454 TG-TCTTAGGAT-TCT----------------------------------------------------
i Alouatta_nigerrima.k141_376068                         C 0 N 0
s Alouatta_palliata.k141_638677                              49282 17 +     70886 TG-TCTTAGGAT-TCTCC-T------------------------------------------------
i Alouatta_palliata.k141_638677                          C 0 N 0
s Alouatta_puruensis.k141_251022                             11452 17 +     30854 TG-TCTTAGGAT-TCTCC-T------------------------------------------------
i Alouatta_puruensis.k141_251022                         C 0 N 0
s Alouatta_seniculus.k141_928287                             35588 14 +     42133 TG-TCTTAGGAT-TCT----------------------------------------------------
i Alouatta_seniculus.k141_928287                         C 0 N 0
s Ammotragus_lervia.NIVO01071767.1                         1592610 18 +   2318259 ct-tctttggcc-tcCCCTG------------------------------------------------
i Ammotragus_lervia.NIVO01071767.1                       C 0 N 0
s Anoura_caudifer.AnoCau_scaffold_1412                      181014 18 -    412891 TT-TCTTAGAAC-TATCCTG------------------------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 N 0
s Antilocapra_americana.AntAmePen_scaffold_21030             53764 18 -     68529 tt-tttttggcc-tctccTG------------------------------------------------
i Antilocapra_americana.AntAmePen_scaffold_21030         C 0 N 0
s Aotus_azarae.k141_887050                                    3795 17 +     17741 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Aotus_azarae.k141_887050                               C 0 N 0
s Aotus_griseimembra.k141_3192254                             4420 17 -     15923 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Aotus_griseimembra.k141_3192254                        C 0 N 0
s Aotus_nancymaae.KZ198451.1                                674702 17 +   5030052 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Aotus_nancymaae.KZ198451.1                             C 0 N 0
s Aotus_trivirgatus.k141_318729                               4696 17 -     16391 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Aotus_trivirgatus.k141_318729                          C 0 N 0
s Aotus_vociferans.k141_1514463                               4255 17 -     17186 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Aotus_vociferans.k141_1514463                          C 0 N 0
s Aplodontia_rufa.AprRuf_scaffold_46868                      27859 18 -     32367 tt-ttgtaggcc-tctccTG------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_46868                  C 0 N 0
s Artibeus_jamaicensis.ArtJam_scaffold_73666                  9519 18 -     15198 tt-tcttagAAC-TACCCTG------------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_73666             C 0 N 0
s Ateles_geoffroyi_b.tarseq_1536                               277351 17 +  21539123 TG-TCTTAGGAC-TCTCC-T------------------------------------------------
i Ateles_geoffroyi_b.tarseq_1536                            C 0 N 0
s Ateles_belzebuth.k141_1572163                              13516 17 +     48076 TG-TCTTAGGAC-TCTCC-T------------------------------------------------
i Ateles_belzebuth.k141_1572163                          C 0 N 0
s Ateles_chamek.k141_615173                                   8652 17 -     28759 TG-TCTTAGGAC-TCACC-T------------------------------------------------
i Ateles_chamek.k141_615173                              C 0 N 0
s Ateles_geoffroyi_a.k141_1283730                              36208 17 +     44353 TG-TCTTAGGAC-TCTCC-T------------------------------------------------
i Ateles_geoffroyi_a.k141_1283730                          C 0 N 0
s Ateles_marginatus.k141_970259                              51578 17 -     71267 TG-TCTTAGGAC-TCACC-T------------------------------------------------
i Ateles_marginatus.k141_970259                          C 0 N 0
s Ateles_paniscus.k141_866194                                25636 17 -     33135 TG-TCTTAGGAC-TCTCC-T------------------------------------------------
i Ateles_paniscus.k141_866194                            C 0 N 0
s Balaenoptera_acutorostrata.KI537508.1                    7967261 18 -  23207421 ct-tcttaggcc-tcttctg------------------------------------------------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 N 0
s Balaenoptera_bonaerensis.DF411050.1                         3762 18 -     25979 ct-tcttaggcc-tcttctg------------------------------------------------
i Balaenoptera_bonaerensis.DF411050.1                    C 0 N 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     93597 18 +    124022 ct-tctttggcc-tcCCCTG------------------------------------------------
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 N 0
s Bison_bison.KN261452.1                                     36771 18 +    288883 CT-TCTTTGGCC-TCCCCTG------------------------------------------------
i Bison_bison.KN261452.1                                 I 1 N 0
s Bos_indicus.CM003047.1                                  28423924 18 -  48749331 CT-TCTTTGGCC-TCCCCTG------------------------------------------------
i Bos_indicus.CM003047.1                                 I 1 n 1
s Bos_mutus.JH880303.1                                      769525 18 +   1948126 CT-TCTTTGGCC-TCCCCTG------------------------------------------------
i Bos_mutus.JH880303.1                                   I 1 N 0
s Bos_taurus.CM000203.6                                   27560070 18 -  45695690 CT-TCTTTGGCC-TCCCCTG------------------------------------------------
i Bos_taurus.CM000203.6                                  I 1 N 0
s Bubalus_bubalis.KI419123.1                               1536751 18 -   4408762 CT-TCTTTGGCC-TCCCCTG------------------------------------------------
i Bubalus_bubalis.KI419123.1                             I 1 N 0
s Cacajao_ayresi.k141_96119                                  10432 18 +     28062 TG-TCTTAGGAC-TCTCCTT------------------------------------------------
i Cacajao_ayresi.k141_96119                              C 0 N 0
s Cacajao_calvus.k141_89051                                  45723 18 -     91139 TG-TCTTAGGAC-TCTCCTT------------------------------------------------
i Cacajao_calvus.k141_89051                              C 0 N 0
s Cacajao_hosomi.k141_81245                                  23250 18 +     95584 TG-TCTTAGGAC-TCTCCTT------------------------------------------------
i Cacajao_hosomi.k141_81245                              C 0 N 0
s Cacajao_melanocephalus.k141_619699                         23163 18 +    119600 TG-TCTTAGGAC-TCTCCTT------------------------------------------------
i Cacajao_melanocephalus.k141_619699                     C 0 N 0
s Callibella_humilis.k141_1233062                            12785 17 +     18648 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Callibella_humilis.k141_1233062                        C 0 N 0
s Callimico_goeldii.k141_1609886                             12288 17 -     13885 TG-TCCTAGGCC-TCTCC-T------------------------------------------------
i Callimico_goeldii.k141_1609886                         C 0 N 0
s Callithrix_geoffroyi.k119_459277                            4499 17 -      8861 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Callithrix_geoffroyi.k119_459277                       C 0 N 0
s Callithrix_jacchus.pat_scaffold_3                      165456841 17 + 189096842 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Callithrix_jacchus.pat_scaffold_3                      C 0 N 0
s Callithrix_kuhlii.k119_102356                               4415 17 +      8664 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Callithrix_kuhlii.k119_102356                          C 0 N 0
s Camelus_bactrianus.KN276810.1                            7635810 18 +  17673402 TT-TCTTAGGTC-AATCTTT------------------------------------------------
i Camelus_bactrianus.KN276810.1                          I 505 I 20927
s Camelus_dromedarius.KN272107.1                           4670111 18 +   7040546 TT-TCTTAGGTC-AATCTTT------------------------------------------------
i Camelus_dromedarius.KN272107.1                         I 505 I 20957
s Camelus_ferus.KB017975.1                                 1213809 18 +   1652518 TT-TCTTAGGTC-AATCTTT------------------------------------------------
i Camelus_ferus.KB017975.1                               I 505 I 21189
s CanFam4.chr16                                           42509331 18 +  60362399 tc-tcttagacc-TATCCTG------------------------------------------------
i CanFam4.chr16                                          C 0 N 0
s Canis_lupus_VD.CanFam_VD_scaffold_35101                    12966 18 -     23171 tc-tcttagacc-TATCCTG------------------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_35101                C 0 N 0
s Canis_lupus_dingo.QKWQ01000480.1                          226307 18 +   9314153 tc-tcttagacc-TATCCTG------------------------------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 N 0
s Canis_lupus_familiaris.chr16                            41619444 18 +  59632846 tc-tcttagacc-TATCCTG------------------------------------------------
i Canis_lupus_familiaris.chr16                           C 0 N 0
s Canis_lupus_orion.HG994398.1                            45111025 18 -  63665305 tc-tcttagacc-TATCCTG------------------------------------------------
i Canis_lupus_orion.HG994398.1                           C 0 N 0
s Capra_aegagrus.CM003241.1                               27416614 18 -  46296322 ct-tctttggcc-tcCCCTG------------------------------------------------
i Capra_aegagrus.CM003241.1                              C 0 N 0
s Capra_hircus.CM004588.1                                 26598611 18 +  44709034 ct-tctttggcc-tcCCCTG------------------------------------------------
i Capra_hircus.CM004588.1                                C 0 N 0
s Capromys_pilorides.CapPil_scaffold_26391                    2519  6 -     20114 -------------t-tctta------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_26391               I 2 N 0
s Carlito_syrichta.NW_007259797.1                           274794 18 +    496798 TT-TCTTAGAAT-TCTCCTG------------------------------------------------
i Carlito_syrichta.NW_007259797.1                        C 0 N 0
s Carollia_perspicillata.CarPer_scaffold_107871               4403 18 +      9923 TT-TCTTAGAAC-TACCCGG------------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_107871          C 0 N 0
s Castor_canadensis.CasCan_scaffold_39952                    31879 18 -     39886 CT-TCTTAGGCT-TCTCTAG------------------------------------------------
i Castor_canadensis.CasCan_scaffold_39952                C 0 N 0
s Catagonus_wagneri.CatWag_scaffold_2839                     83613 18 -    217609 ct-ttttaggcc-tctcctc------------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 N 0
s Cavia_porcellus.DS562891.1                               5003917 17 +  23407841 tt-tcttaaa-t-tttcttg------------------------------------------------
i Cavia_porcellus.DS562891.1                             I 1 N 0
s Cavia_tschudii.CavTsc_scaffold_8919                          802 17 -    143979 tt-tcttaaa-t-tttcttG------------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_8919                    I 1 N 0
s Cebuella_niveiventris.k141_592277                           7756 17 -     12580 TG-TCTTAGGAC-TCTCC-T------------------------------------------------
i Cebuella_niveiventris.k141_592277                      C 0 N 0
s Cebuella_pygmaea.k141_145798                               45865 17 +     53515 TG-TCTTAGGAC-TCTCC-T------------------------------------------------
i Cebuella_pygmaea.k141_145798                           C 0 N 0
s Cebus_albifrons.Contig27                                  376492 17 -  26074798 TG-GCTTAGGCC-TCTCC-T------------------------------------------------
i Cebus_albifrons.Contig27                               C 0 N 0
s Cebus_olivaceus.k141_1404781                               10561 17 -     34880 TG-GCTTAGGCC-TCTCC-T------------------------------------------------
i Cebus_olivaceus.k141_1404781                           C 0 N 0
s Cebus_unicolor.k141_1654760                                69659 17 -     89041 TG-GCTTAGGCC-TCTCC-T------------------------------------------------
i Cebus_unicolor.k141_1654760                            C 0 N 0
s Cephalopachus_bancanus.k141_1140705                         2457 18 -     76265 tt-tcttagaat-tctccca------------------------------------------------
i Cephalopachus_bancanus.k141_1140705                    C 0 N 0
s Ceratotherium_simum.JH767749.1                          15496161 18 -  27778364 ct-tcttagacc-TATCCTG------------------------------------------------
i Ceratotherium_simum.JH767749.1                         C 0 N 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_50692          22992 18 +     27315 ct-tcttagacc-TATCCTG------------------------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_50692      C 0 N 0
s Cercocebus_atys.KQ010504.1                                144438 17 -   4669795 TT-TCGTAGGCT-GCT-CTT------------------------------------------------
i Cercocebus_atys.KQ010504.1                             C 0 N 0
s Cercocebus_chrysogaster.k141_697306                          412 17 +      3297 TT-TCGTAGGCT-GCT-CTT------------------------------------------------
i Cercocebus_chrysogaster.k141_697306                    C 0 N 0
s Cercocebus_lunulatus.k141_2500334                           3610 17 -     14410 TT-TCGTAGGCT-GCT-CTT------------------------------------------------
i Cercocebus_lunulatus.k141_2500334                      C 0 N 0
s Cercocebus_torquatus.k141_2159127                          47992 17 -    148725 TT-TCGTAGGCT-GCT-CTT------------------------------------------------
i Cercocebus_torquatus.k141_2159127                      C 0 N 0
s Cercopithecus_ascanius.k141_3120866                        30269 17 -     40656 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Cercopithecus_ascanius.k141_3120866                    C 0 N 0
s Cercopithecus_cephus.k141_4183004                          10228 17 +     20796 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Cercopithecus_cephus.k141_4183004                      C 0 N 0
s Cercopithecus_diana.k141_132293                            15342 17 -     17524 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Cercopithecus_diana.k141_132293                        C 0 N 0
s Cercopithecus_hamlyni.k141_566925                          31075 17 -     34525 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Cercopithecus_hamlyni.k141_566925                      C 0 N 0
s Cercopithecus_lowei.k141_2101310                           14853 17 -     25376 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Cercopithecus_lowei.k141_2101310                       C 0 N 0
s Cercopithecus_albogularis.ctg5                                  367442 17 -  39242232 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Cercopithecus_albogularis.ctg5                               C 0 N 0
s Cercopithecus_mona.ctg39                                  273167 17 +  21565898 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Cercopithecus_mona.ctg39                               C 0 N 0
s Cercopithecus_neglectus.k141_858615                        35534 17 -     45857 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Cercopithecus_neglectus.k141_858615                    C 0 N 0
s Cercopithecus_nictitans.k141_2995370                       30435 17 -     32606 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Cercopithecus_nictitans.k141_2995370                   C 0 N 0
s Cercopithecus_petaurista.k141_42573                         6590 17 +      8499 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Cercopithecus_petaurista.k141_42573                    C 0 N 0
s Cercopithecus_pogonias.k141_6079                           28995 17 +     70610 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Cercopithecus_pogonias.k141_6079                       C 0 N 0
s Cercopithecus_roloway.k141_3012935                         25955 17 +     36323 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Cercopithecus_roloway.k141_3012935                     C 0 N 0
s Chaetophractus_vellerosus.ChaVel_scaffold_15563            15838 18 -     19938 tt-ccgtaggtg-tctccTG------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_15563        C 0 N 0
s Cheracebus_lucifer.k141_2312002                            11525 18 -     32913 TG-TCTTGGGAC-CCTCCTT------------------------------------------------
i Cheracebus_lucifer.k141_2312002                        C 0 N 0
s Cheracebus_lugens.k141_1179667                             21938 18 -     40346 TG-TCTTAGGAC-CCTCCTT------------------------------------------------
i Cheracebus_lugens.k141_1179667                         C 0 N 0
s Cheracebus_regulus.k141_471822                             22192 18 +    216457 TG-TCTTAGGAC-CCTCCTT------------------------------------------------
i Cheracebus_regulus.k141_471822                         C 0 N 0
s Cheracebus_torquatus.k141_890198                           21982 18 +     39636 TG-TCTTAGGAC-CCTCCTT------------------------------------------------
i Cheracebus_torquatus.k141_890198                       C 0 N 0
s Chiropotes_albinasus.k141_1091259                          34072 17 -     52013 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Chiropotes_albinasus.k141_1091259                      C 0 N 0
s Chiropotes_israelita.k141_313004                           45063 18 -    112038 TG-TCTTAGGAC-TCTCCTT------------------------------------------------
i Chiropotes_israelita.k141_313004                       C 0 N 0
s Chiropotes_sagulatus.k141_1113111                          10613 18 +     34062 TG-TCTTAGGAC-TCTCCTT------------------------------------------------
i Chiropotes_sagulatus.k141_1113111                      C 0 N 0
s Chlorocebus_aethiops.ctg25                                346857 17 +  18827391 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Chlorocebus_aethiops.ctg25                             C 0 N 0
s Chlorocebus_pygerythrus.k141_3063162                       13396 17 -     44032 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Chlorocebus_pygerythrus.k141_3063162                   C 0 N 0
s Chlorocebus_sabaeus.CM001947.1                            308243 17 - 135778131 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Chlorocebus_sabaeus.CM001947.1                         C 0 N 0
s Choloepus_didactylus.ChoDid_scaffold_147047                 2539 18 +     10270 tt-tcataggtc-tctccTG------------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_147047            C 0 N 0
s Choloepus_hoffmanni.KN194906.1                            610016 18 -    839153 tt-tcataggtc-tctccTG------------------------------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 N 0
s Chrysochloris_asiatica.ChrAsi_scaffold_510450               2760 18 -      4087 ct-tttcaggcc-tttccTG------------------------------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_510450          C 0 N 0
s Colobus_angolensis.KN981557.1                             412651 17 -   2368649 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Colobus_angolensis.KN981557.1                          C 0 N 0
s Colobus_guereza.LG01                                      382533 17 - 200372422 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Colobus_guereza.LG01                                   C 0 N 0
s Colobus_polykomos.k141_906115                               6086 17 -     84244 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Colobus_polykomos.k141_906115                          C 0 N 0
s Condylura_cristata.JH655891.1                           35811113 18 +  53390261 TT-TCTTAGGCT-TCACCTG------------------------------------------------
i Condylura_cristata.JH655891.1                          C 0 N 0
s Craseonycteris_thonglongyai.CraTho_scaffold_120505          6652 18 -      8242 GT-TTTTAGAGC-TATCCTG------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_120505     C 0 N 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 47825 18 -     83289 tt-tcttaggtt-tcAACTG------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 N 0
s Cricetulus_griseus.LT883664.1                          213119346 18 - 224834208 tt-tcttaggtt-tcAACTG------------------------------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 2169
s Crocidura_indochinensis.CroInd_scaffold_205242               265 18 +      5812 tt-tcttagacc-tcCCCTG------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_205242         C 0 N 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129              8274 18 +     87169 TC-TCTGAGTCC-TATCCTG------------------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 N 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    650558 17 -   1526836 tt-tcttaaa-t-tctttTG------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 N 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                  23187 17 +     50838 TAATCTTAAA-A-T-TTTTA------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 N 0
s Cuniculus_paca.CunPac_flattened_line_7025                  12679 17 +     36344 ct-tcttaaa-t-tttcttG------------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_7025              I 1 N 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            32119 17 +     75252 ct-tcttaaa-t-gttcttg------------------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_15900        I 1 N 0
s Dasypus_novemcinctus.JH564415.1                          2113582 18 -   2246927 tt-tcggaggtg-tctccTG------------------------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 N 0
s Delphinapterus_leucas.KZ290073.1                        18635673 18 -  35494412 ct-tcttaggcc-tctccTG------------------------------------------------
i Delphinapterus_leucas.KZ290073.1                       C 0 N 0
s Desmodus_rotundus.KZ672289.1                            11869396 18 -  20541912 tt-tcCTAGAAC-TGTCCTG------------------------------------------------
i Desmodus_rotundus.KZ672289.1                           C 0 N 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  668431 18 -   1390856 ct-tcttagacc-TATCCTG------------------------------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 N 0
s Diceros_bicornis.DicBicMic_scaffold_5955                  143230 18 -    198055 ct-tcttagacc-TATCCTG------------------------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 N 0
s Dipodomys_ordii.KN672350.1                              18955933 18 -  37912305 tt-ttctaggct-tcttcTG------------------------------------------------
i Dipodomys_ordii.KN672350.1                             C 0 N 0
s Dipodomys_stephensi.DipSte_scaffold_77284                   1537 18 +     14058 tt-ttctatgct-tcttcTG------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_77284              C 0 N 0
s Dolichotis_patagonum.DolPat_scaffold_341948                  280 17 -      1676 tt-tcctaaa-t-tttcttG------------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_341948            I 1 N 0
s Echinops_telfairi.JH980293.1                            62858890 18 - 111700974 tt-tcttagttc-tttcTTG------------------------------------------------
i Echinops_telfairi.JH980293.1                           C 0 N 0
s Eidolon_helvum.AWHC01266696.1                              10082 18 +     19438 ca-tcttagCGG-TATCTTG------------------------------------------------
i Eidolon_helvum.AWHC01266696.1                          C 0 N 0
s Elaphurus_davidianus.JRFZ01104969.1                       246400 18 -    607251 ct-tctttggcc-tctccTG------------------------------------------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 N 0
s Ellobius_lutescens.LOEQ01008920.1                          35534 18 +    110024 tt-tctttgttt-tcaactG------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 14855
s Ellobius_talpinus.LOJH01026522.1                           17455 18 +     18970 TT-TCTTTGGTT-TCAACTG------------------------------------------------
i Ellobius_talpinus.LOJH01026522.1                       C 0 N 0
s Enhydra_lutris.KZ291758.1                               24925922 18 +  41312741 tc-tcttagacc-TACCCTG------------------------------------------------
i Enhydra_lutris.KZ291758.1                              C 0 N 0
s Eptesicus_fuscus.JH977646.1                             12583165 18 +  14770903 tt-tcttagacc-TACCCTG------------------------------------------------
i Eptesicus_fuscus.JH977646.1                            C 0 N 0
s Equus_asinus.JREZ01000139.1                              3045674 18 -   4378816 tt-tcttagacc-TATCCTG------------------------------------------------
i Equus_asinus.JREZ01000139.1                            C 0 N 0
s Equus_caballus.CM000403.2                               21379604 18 +  39960074 tt-tcttagacc-TATCCTG------------------------------------------------
i Equus_caballus.CM000403.2                              C 0 N 0
s Equus_przewalskii.KK951119.1                              415586 18 -    498745 tt-tcttagacc-TATCCTG------------------------------------------------
i Equus_przewalskii.KK951119.1                           C 0 N 0
s Erinaceus_europaeus.JH835339.1                           3671841 16 +   7059049 ---TCTATGGTG-TCTTCTG------------------------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 N 0
s Erythrocebus_patas.Contig38                               266385 17 +  21539334 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Erythrocebus_patas.Contig38                            C 0 N 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           74876 18 -    133382 ct-tcttaggcc-tctccTG------------------------------------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 N 0
s Eubalaena_japonica.EubJap_flattened_line_57114              2598 18 +     25849 ct-tcttaggac-tctccTG------------------------------------------------
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 N 0
s Felis_catus.CM001381.2                                 186251011 18 - 206538554 TG-TCTGAGACC-TATCCTG------------------------------------------------
i Felis_catus.CM001381.2                                 C 0 N 0
s Felis_catus_fca126.CM031415.1                          185120967 18 - 205367284 TG-TCTGAGACC-TATCCTG------------------------------------------------
i Felis_catus_fca126.CM031415.1                          C 0 N 0
s Felis_nigripes.FelNig_flattened_line_44075                  1608 18 +     25330 TG-TCTGAGACC-TATCCTG------------------------------------------------
i Felis_nigripes.FelNig_flattened_line_44075             C 0 N 0
s Fukomys_damarensis.KN121974.1                            2927112 17 -   3816255 CT-TCTTAAA-T-TCTCTTG------------------------------------------------
i Fukomys_damarensis.KN121974.1                          C 0 N 0
s Galeopterus_variegatus.GalVar_scaffold_51812                5470 18 -     28519 tt-tcttagcct-tcTCCTG------------------------------------------------
i Galeopterus_variegatus.GalVar_scaffold_51812           C 0 N 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                       2658 18 +    660261 ct-tctttggcc-tcGCCTG------------------------------------------------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 N 0
s Glis_glis.GliGli_scaffold_163929                            5474 18 -      6791 tt-tctttggcc-tctccTG------------------------------------------------
i Glis_glis.GliGli_scaffold_163929                       C 0 N 0
s Gorilla_beringei.k141_935316                                1484 65 +     34797 TT-TCTTAGGCC-TCT-CTTtgtgtcaggaattggtgagttcttggtctcactgacttcaagaatgaa
i Gorilla_beringei.k141_935316                           C 0 C 0
s Gorilla_gorilla.LT578336.1                                 76075 65 +  33314783 tt-tcttaggcc-tct-CTTtgtgtcaggaattggtgagttcttggtctcactgacttcaagaatgaa
i Gorilla_gorilla.LT578336.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                    7394 18 -     78134 tt-tctttggcc-tctccTG------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 N 0
s Helogale_parvula.HelPar_flattened_line_2585                34634 18 -    327341 TT-TCTGAGTCC-TATCCTG------------------------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 N 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 16324 18 +     48891 ct-tctttggcc-tcccaTG------------------------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 N 0
s Heterocephalus_glaber.JH602082.1                         1939562 17 -  22651954 tt-tcttaaa-t-tctcttg------------------------------------------------
i Heterocephalus_glaber.JH602082.1                       C 0 N 0
s Heterohyrax_brucei.HetBruBak_scaffold_116546                6620 18 +      8654 tt-tctgagatt-tctCTTG------------------------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_116546           C 0 N 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803               11711 18 -     36432 ct-tcttaggcc-tctccTG------------------------------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 N 0
s Hipposideros_galeritus.HipGal_scaffold_108494                464 18 -      8370 TT-TCTTAGAGC-TATCGTG------------------------------------------------
i Hipposideros_galeritus.HipGal_scaffold_108494          C 0 N 0
s Hoolock_leuconedys.ctg274                                    146042 65 -    630532 TT-TCTTAGGTC-TCT-CTTtgtgtccagaattggtgggttcttggtctcactgacttcaagaatgaa
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_14808                  74314 18 +     83186 TC-TCTGTGACC-TATCCTG------------------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_14808              I 1 N 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            75856 17 +    143317 tt-tctTAAA-T-TTTCCTG------------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        I 1 N 0
s Hylobates_agilis.k141_1155965                               9087 65 +     12352 TT-TCTTAGGTC-TCT-CTTtgtgtccagaattggtgggttcttggtctcactgacttcaagaatgaa
i Hylobates_agilis.k141_1155965                          C 0 C 0
s Hylobates_klossii.k141_738755                              16274 65 +     55766 TT-TCTTAGGTC-TCT-CTTtgtgtccggaattggtgggttcttggtctcactgacttcaagaatgaa
i Hylobates_klossii.k141_738755                          C 0 C 0
s Hylobates_pileatus_b.LG02                                       2055804 65 + 191637585 TT-TCTTAGGTC-TCT-CTTtgtgtccggaattggtgggttcttggtctcactgacttcaagaatgaa
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            7804682 65 +  11177569 TT-TCTTAGGTC-TCT-CTTtgtgtccggaattggtgggttcttggtctcactgacttcaagaatgaa
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                      11716 17 -    135385 tt-tcttaaa-t-tctcttc------------------------------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 N 0
s Ictidomys_tridecemlineatus.JH393364.1                     390971 18 +   7955117 tt-ttgcagtcc-tctccTG------------------------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 N 0
s Inia_geoffrensis.IniGeo_flattened_line_69447               13777 18 -     16823 ct-tcttaggcc-tctccTG------------------------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_69447           C 0 N 0
s Jaculus_jaculus.JH725527.1                               1243421 11 +   9596543 --------GTTT-TCTACTG------------------------------------------------
i Jaculus_jaculus.JH725527.1                             C 0 N 0
s Kogia_breviceps.KogBre_flattened_line_3970                 75615 18 -     97402 ct-tcttaggcc-tctccTG------------------------------------------------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 N 0
s Lagothrix_lagothricha.k141_246028                          45898 17 +    110728 TG-TCTTAGGAC-TCTCC-T------------------------------------------------
i Lagothrix_lagothricha.k141_246028                      C 0 N 0
s Lasiurus_borealis.LasBor_scaffold_61236                     1853 18 -     25587 TT-TCTTAGAGC-AATCCAG------------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_61236                I 35 N 0
s Leontocebus_fuscicollis.k141_3470480                        1344 17 -     23187 TG-TCTTAGGCC-TTTCC-T------------------------------------------------
i Leontocebus_fuscicollis.k141_3470480                   C 0 N 0
s Leontocebus_illigeri.k141_2759473                           1658 17 -     14280 TG-TCTTAGGCC-TTTCC-T------------------------------------------------
i Leontocebus_illigeri.k141_2759473                      C 0 N 0
s Leontocebus_nigricollis.k141_1320036                        1298 17 +      3713 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Leontocebus_nigricollis.k141_1320036                   C 0 N 0
s Leontopithecus_chrysomelas.k141_3286424                     1484 17 +      8855 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Leontopithecus_chrysomelas.k141_3286424                C 0 N 0
s Leontopithecus_rosalia.k141_1583055                         6285 17 -     13645 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Leontopithecus_rosalia.k141_1583055                    C 0 N 0
s Leptonychotes_weddellii.KB714746.1                        817194 18 -   3914936 tc-tcttagacc-tattctg------------------------------------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 N 0
s Lepus_americanus.LepAme_scaffold_56121                     23471 18 +     24238 tg-tcttatccc-tctcctg------------------------------------------------
i Lepus_americanus.LepAme_scaffold_56121                 C 0 N 0
s Lipotes_vexillifer.KE559953.1                             344959 18 +    662738 ct-tcttaggcc-tctccTG------------------------------------------------
i Lipotes_vexillifer.KE559953.1                          C 0 N 0
s Lophocebus_aterrimus.ctg367                               337314 17 -   1826925 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Lophocebus_aterrimus.ctg367                            C 0 N 0
s Loxodonta_africana.GL010049.1                           39088361 18 +  43346337 ct-tcttaggtc-tctcccG------------------------------------------------
i Loxodonta_africana.GL010049.1                          C 0 N 0
s Lycaon_pictus.CM007581.1                                41618599 18 +  59628241 tc-tcttagacc-TATCCTG------------------------------------------------
i Lycaon_pictus.CM007581.1                               C 0 N 0
s Macaca_arctoides.k141_1757516                              48712 17 -     61512 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Macaca_arctoides.k141_1757516                          C 0 N 0
s Macaca_assamensis.Contig5                                 376374 17 -  60120075 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Macaca_assamensis.Contig5                              C 0 N 0
s Macaca_cyclopis.k119_263443                                28642 17 +     30207 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Macaca_cyclopis.k119_263443                            C 0 N 0
s Macaca_fascicularis.k141_1617581                            3480 17 -      5035 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Macaca_fascicularis.k141_1617581                       C 0 N 0
s Macaca_fuscata.k119_546792                                 28595 17 +     30527 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Macaca_fuscata.k119_546792                             C 0 N 0
s Macaca_leonina.k141_321385                                 39771 17 -     50087 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Macaca_leonina.k141_321385                             C 0 N 0
s Macaca_maura.k141_1103459                                  49516 17 +     51645 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Macaca_maura.k141_1103459                              C 0 N 0
s Macaca_mulatta.NC_041758.1                                418718 17 - 187317192 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Macaca_mulatta.NC_041758.1                             C 0 N 0
s Macaca_nemestrina.KQ007038.1                              402949 17 +  25927173 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Macaca_nemestrina.KQ007038.1                           C 0 N 0
s Macaca_nigra.k141_2818840                                  52120 17 -     62418 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Macaca_nigra.k141_2818840                              C 0 N 0
s Macaca_radiata.k141_2139468                                 4651 17 +     14901 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Macaca_radiata.k141_2139468                            C 0 N 0
s Macaca_siberu.k141_2185972                                 48593 17 +     59329 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Macaca_siberu.k141_2185972                             C 0 N 0
s Macaca_silenus.Contig273                                  274500 17 +    668171 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Macaca_silenus.Contig273                               C 0 N 0
s Macaca_thibetana.k99_45532                                  3132 17 -      5049 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Macaca_thibetana.k99_45532                             C 0 N 0
s Macaca_tonkeana.k141_339739                                 6299 17 +     17132 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Macaca_tonkeana.k141_339739                            C 0 N 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                227054 18 -    270270 ct-tcttagAGG-TATCCAG------------------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 N 0
s Mandrillus_leucophaeus.scaffold280                        325782 17 +  24302211 TT-TCGTAGGCT-GCT-CTT------------------------------------------------
i Mandrillus_leucophaeus.scaffold280                     C 0 N 0
s Mandrillus_sphinx.Contig270                               360613 17 -    752769 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Mandrillus_sphinx.Contig270                            C 0 N 0
s Manis_javanica.JSZB01003497.1                             679139 18 -    737560 TT-TCACAGACC-TATCCTG------------------------------------------------
i Manis_javanica.JSZB01003497.1                          C 0 N 0
s Manis_pentadactyla.KN006162.1                             226422 18 +    317179 TT-TCACAGACC-TATCCTG------------------------------------------------
i Manis_pentadactyla.KN006162.1                          C 0 N 0
s Marmota_marmota.CZRN01000018.1                           7505171 18 +  40650429 tt-ttgcagtcc-tctccTG------------------------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 N 0
s Megaderma_lyra.MegLyr_scaffold_4542                       154369 18 +    207569 tt-tcttagAGC-TATCCTG------------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 N 0
s Mellivora_capensis.MelCap_flattened_line_19308             29933 18 -     74585 tc-tcttagacc-TACCCTG------------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 N 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 53529 18 -    140813 TT-TCTTAGGTT-TCAACCA------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 N 0
s Mesocricetus_auratus.KB708134.1                         17433640 18 +  29670104 TT-TCTTAGGTT-TCAACTG------------------------------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 2212
s Mesoplodon_bidens.MesBid_scaffold_6114                     91242 18 +     93471 ct-tcttaggcc-tctccTG------------------------------------------------
i Mesoplodon_bidens.MesBid_scaffold_6114                 C 0 N 0
s Mico_argentatus.k141_582562                                12894 17 +     17804 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Mico_argentatus.k141_582562                            C 0 N 0
s Mico_humeralifer.k141_1189820                                621 17 +      5551 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Mico_humeralifer.k141_1189820                          C 0 N 0
s Mico_schneideri.k141_1877700                                     21696 17 -     26561 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Mico_schneideri.k141_1877700                                 C 0 N 0
s Microgale_talazaci.MicTal_scaffold_6613                    50073 18 +    145209 tt-tcttagttc-tttcTTG------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_6613                C 0 I 11442
s Micronycteris_hirsuta.MicHir_scaffold_2233                188975 18 +    200668 tt-tcttagAAC-TATTTTG------------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_2233             C 0 N 0
s Microtus_ochrogaster.CM001695.1                         15966942 18 +  27267610 TT-TCTTTGGTT-TCAACTG------------------------------------------------
i Microtus_ochrogaster.CM001695.1                        C 0 I 2106
s Miniopterus_natalensis.LDJU01000034.1                    6368795 18 -   8254450 tt-ttttaggcc-TATCCTG------------------------------------------------
i Miniopterus_natalensis.LDJU01000034.1                  C 0 N 0
s Miniopterus_schreibersii.MinSch_scaffold_23309             46526 18 -     48117 tt-tcttaggcc-TATCCTG------------------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_23309         C 0 N 0
s Miopithecus_ogouensis.k141_1534655                         25881 17 -     27822 TT-TCTTAGGCC-GCT-CTT------------------------------------------------
i Miopithecus_ogouensis.k141_1534655                     C 0 N 0
s Mirounga_angustirostris.MirAng_flattened_line_54046        12427 18 +     27589 tc-tcttagacc-tattcTG------------------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_54046    C 0 N 0
s Monodon_monoceros.MonMon_M_scaffold_103                   363351 18 +    437263 ct-tcttaggcc-tctccTG------------------------------------------------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 N 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 183429 18 +    366855 tt-ccttagAAC-TATCCTG------------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 N 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32556 18 -     82753 ct-tctttggcc-tctccTG------------------------------------------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 N 0
s Mungos_mungo.MunMun_flattened_line_18455                   22393 18 -     63510 TC-TCTGAGTTT-TATCCTG------------------------------------------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 N 0
s Murina_feae.MurFea_scaffold_17764                          45779 18 +     47283 TT-TCTTAGACC-TATCCTG------------------------------------------------
i Murina_feae.MurFea_scaffold_17764                      C 0 N 0
s Mus_caroli.LT608237.1                                   35598347 18 + 120012414 TT-TCTTAGGTT-TCAGCTG------------------------------------------------
i Mus_caroli.LT608237.1                                  C 0 N 0
s Mus_musculus.chr8                                       41691663 18 + 129401213 TT-TCTTAGGTT-TCAGCTG------------------------------------------------
i Mus_musculus.chr8                                      C 0 N 0
s Mus_pahari.LT608297.1                                   58219623 18 +  89631738 TT-TCTTAGGTT-TCAGCTG------------------------------------------------
i Mus_pahari.LT608297.1                                  C 0 N 0
s Mus_spretus.CM004101.1                                  39500582 18 + 130317789 TT-TCTTAGGTT-TCAGCTG------------------------------------------------
i Mus_spretus.CM004101.1                                 C 0 N 0
s Muscardinus_avellanarius.MusAve_scaffold_5560               3477 18 -    124358 TT-TCTTTGGCC-TCCCCTG------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_5560          C 0 N 0
s Mustela_putorius.JH418006.1                             14358884 18 +  14710649 tc-tcttagacc-TACCCTG------------------------------------------------
i Mustela_putorius.JH418006.1                            C 0 N 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      1575  6 -     27262 -------------T-TCTTA------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_57531                 I 2 N 0
s Myotis_brandtii.KE162005.1                               9797786 18 +  10118263 tt-tcttagacc-TATCCTG------------------------------------------------
i Myotis_brandtii.KE162005.1                             C 0 N 0
s Myotis_davidii.KB100139.1                                4391961 18 +   6019432 tt-tcttaggcc-TATCCTG------------------------------------------------
i Myotis_davidii.KB100139.1                              C 0 N 0
s Myotis_lucifugus.GL429869.1                               387999 18 +   4330536 tt-tcttaggcc-TATCCTG------------------------------------------------
i Myotis_lucifugus.GL429869.1                            C 0 N 0
s Myotis_myotis.MyoMyo_scaffold_66571                         6787 18 +     18357 TT-TCTTAGGCC-TATCCTG------------------------------------------------
i Myotis_myotis.MyoMyo_scaffold_66571                    C 0 N 0
s Nannospalax_galili.KL204047.1                             950555 18 +   3037898 tt-ttttaggct-tctactg------------------------------------------------
i Nannospalax_galili.KL204047.1                          C 0 N 0
s Nasalis_larvatus.k141_1350636                              32661 17 +     34575 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Nasalis_larvatus.k141_1350636                          C 0 N 0
s Neomonachus_schauinslandi.NINY01007730.1                11469874 18 -  31847680 tc-tcttagacc-tattctg------------------------------------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 N 0
s Neophocaena_asiaeorientalis.KZ687982.1                   1236009 18 -   7148211 ct-tcttaggcc-tctccTG------------------------------------------------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 N 0
s Noctilio_leporinus.NocLep_scaffold_7894                   131700 18 -    149072 tt-tcttagAAC-TATCCTG------------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_7894                C 0 N 0
s Nomascus_annamensis.k141_1771965                           56976 65 -    132029 TT-TCTTAGGTC-TCT-CTTtgtgtccgcaattggtgggttcttggtctcactgacttcaagaatgaa
i Nomascus_annamensis.k141_1771965                       C 0 C 0
s Nomascus_concolor.k141_735679                              13071 65 -     16345 TT-TCTTAGGTC-TCT-CTTtgtgtccgcaattggtgggttcttggtctcactgacttcaagaatgaa
i Nomascus_concolor.k141_735679                          C 0 C 0
s Nomascus_gabriellae.k141_57920                             18960 65 +     22201 TT-TCTTAGGTC-TCT-CTTtgtgtccgcaattggtgggttcttggtctcactgacttcaagaatgaa
i Nomascus_gabriellae.k141_57920                         C 0 C 0
s Nomascus_siki_b.tarseq_93                            8417190 65 -  22158432 TT-TCTTAGGTC-TCT-CTTTGTGTCCGCAATtggtgggttcttggtctcactgacttcaagaatgaa
i Nomascus_siki_b.tarseq_93                          C 0 C 0
s Nomascus_siki_a.k141_941534                                  29365 65 -     54323 TT-TCTTAGGTC-TCT-CTTtgtgtccgcaattggtgggttcttggtctcactgacttcaagaatgaa
i Nomascus_siki_a.k141_941534                              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1                202304 18 +   9404916 tc-tcttagacc-TATCctg------------------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 N 0
s Octodon_degus.JH651603.1                                11059848 17 -  11899542 gt-tattaaa-ttt-tctta------------------------------------------------
i Octodon_degus.JH651603.1                               C 0 N 0
s Odobenus_rosmarus.KB229312.1                             1455643 18 +   2017862 tc-tcttagacc-tattcTG------------------------------------------------
i Odobenus_rosmarus.KB229312.1                           C 0 N 0
s Odocoileus_virginianus.KZ100018.1                         442952 18 -    630418 ct-tctttggcc-tctccTG------------------------------------------------
i Odocoileus_virginianus.KZ100018.1                      C 0 N 0
s Okapia_johnstoni.LVCL01S0005463.1                          22609 18 +    150152 ct-tctttggcc-tcGCCTG------------------------------------------------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 N 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    97568 18 -    140218 tt-tctttggtt-tcAACTG------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 N 0
s Onychomys_torridus.OnyTor_scaffold_28377                    8143 18 -     41509 TT-TCTTAGGTT-CCAACTG------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 2185
s Orcinus_orca.KB316932.1                                  8106422 18 +  10937097 ct-tcttaggcc-tctccTG------------------------------------------------
i Orcinus_orca.KB316932.1                                C 0 N 0
s Orycteropus_afer.OryAfe_flattened_line_201229               3410 18 +     11607 ct-tcttaggtc-tctccTG------------------------------------------------
i Orycteropus_afer.OryAfe_flattened_line_201229          C 0 N 0
s Oryctolagus_cuniculus.CM000791.1                       107109760 18 - 174332312 tg-tcttatacc-tctccTG------------------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 N 0
s Otocyon_megalotis.JAEUCK010005147.1                        43466 18 +    559221 TC-TCTTAGACC-TATCCTG------------------------------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 N 0
s Ovis_aries.CM001607.2                                   26411350 18 -  44047080 ct-tctttggcc-tcccaTG------------------------------------------------
i Ovis_aries.CM001607.2                                  C 0 N 0
s Ovis_canadensis.OviCan_scaffold_67953                      11973 18 +     17875 ct-tctttggcc-tcccaTG------------------------------------------------
i Ovis_canadensis.OviCan_scaffold_67953                  C 0 N 0
s Pan_paniscus.AJFE02004363.1                                  965 65 +      1263 TT-TCTTAGGCC-TCT-CTTTGTGTCGGGAATTGGtgagttcttggtctcactgacttcaagaatgaa
i Pan_paniscus.AJFE02004363.1                            I 76 N 0
s Pan_troglodytes.KZ622849.1                                 38328 65 -    110857 TT-TCTTAGGCC-TCT-CTTTGTGTCGGGAATTGGtgagttcttggtctcactgacttcaagaatgaa
i Pan_troglodytes.KZ622849.1                             I 182 n 100
s Panthera_onca.PanOnc_flattened_line_3271                   28941 18 -    230217 TG-TCTGAGACC-TATCCTG------------------------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 N 0
s Panthera_pardus.KV860321.1                              18466182 18 -  18783137 TG-TCTGAGACC-TATCCTG------------------------------------------------
i Panthera_pardus.KV860321.1                             C 0 N 0
s Panthera_tigris.KE722367.1                               3976781 18 +   8748460 TG-TCTGAGACC-TATCTTG------------------------------------------------
i Panthera_tigris.KE722367.1                             C 0 N 0
s Pantholops_hodgsonii.KE114653.1                          1622867 18 +   2937107 ct-tctttggcc-tcCCCTG------------------------------------------------
i Pantholops_hodgsonii.KE114653.1                        C 0 N 0
s Papio_anubis.CM001495.2                                   246797 17 - 183742232 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Papio_anubis.CM001495.2                                C 0 N 0
s Papio_cynocephalus.k141_1507553                            13082 17 +     21308 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Papio_cynocephalus.k141_1507553                        C 0 N 0
s Papio_hamadryas.Contig39                                  295825 17 -  20919399 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Papio_hamadryas.Contig39                               C 0 N 0
s Papio_kindae.k141_2214839                                  25724 17 -     27687 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Papio_kindae.k141_2214839                              C 0 N 0
s Papio_papio.k141_3538738                                    2401 17 +     10553 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Papio_papio.k141_3538738                               C 0 N 0
s Papio_ursinus.k141_5784434                                  2362 17 -     10386 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Papio_ursinus.k141_5784434                             C 0 N 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     19059 18 +     78924 TC-TCTGAGACC-TATCCTG------------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 N 0
s Perognathus_longimembris.PerPac_flattened_line_89005        8042 18 +      9367 tt-ttctaggct-tctccTG------------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_89005   C 0 N 0
s Peromyscus_maniculatus.KI615324.1                         251295 18 +  18517816 tt-tcttaggtt-ccAACTG------------------------------------------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 2204
s Phocoena_phocoena.PhoPho_flattened_line_24159               7943 18 -     63832 ct-tcttagtcc-tctccTG------------------------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 N 0
s Piliocolobus_badius.k141_2704958                            6047 17 +     55023 TT-TCTCAGGCC-TCT-CTT------------------------------------------------
i Piliocolobus_badius.k141_2704958                       C 0 N 0
s Piliocolobus_gordonorum.k141_381342                         5570 17 -     89929 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Piliocolobus_gordonorum.k141_381342                    C 0 N 0
s Piliocolobus_kirkii.k141_1310104                            6158 17 +     40849 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Piliocolobus_kirkii.k141_1310104                       C 0 N 0
s Piliocolobus_tephrosceles.PDMG02000141.1                  257887 17 +  14605196 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 N 0
s Pipistrellus_pipistrellus.PipPip_scaffold_46974             8278 18 +     22231 TT-TCTTAGACC-TATCCTG------------------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_46974        C 0 N 0
s Pithecia_albicans.k141_1239476                             67413 18 +    207309 TG-TCTTAGGAC-TCTCCTT------------------------------------------------
i Pithecia_albicans.k141_1239476                         C 0 N 0
s Pithecia_chrysocephala.k141_785207                          8508 18 -     25401 TG-TCTTAGGAC-TCTCCTT------------------------------------------------
i Pithecia_chrysocephala.k141_785207                     C 0 N 0
s Pithecia_hirsuta.k141_640380                               34254 18 +     58159 TG-TCTTAGGAC-TCTCCTT------------------------------------------------
i Pithecia_hirsuta.k141_640380                           C 0 N 0
s Pithecia_mittermeieri.k141_1280039                         34530 18 +     63561 TG-TCTTAGGAC-TCTCCTT------------------------------------------------
i Pithecia_mittermeieri.k141_1280039                     C 0 N 0
s Pithecia_pissinattii.k141_878371                           34285 18 +     51148 TG-TCTTAGGAC-TCTCCTT------------------------------------------------
i Pithecia_pissinattii.k141_878371                       C 0 N 0
s Pithecia_pithecia.tarseq_165                              559261 18 -   4542175 TG-TCTTAGGAC-TCTCCTT------------------------------------------------
i Pithecia_pithecia.tarseq_165                           C 0 N 0
s Pithecia_vanzolinii.k141_1369553                           34269 18 +     51125 TG-TCTTAGGAC-TCTCCTT------------------------------------------------
i Pithecia_vanzolinii.k141_1369553                       C 0 N 0
s Platanista_gangetica.PlaMin_flattened_line_83166            5191 18 +     19503 ct-tcttaggcc-tctccTG------------------------------------------------
i Platanista_gangetica.PlaMin_flattened_line_83166       C 0 N 0
s Plecturocebus_bernhardi.k141_2549090                       10699 18 +     39866 TG-TCTTAGGAC-CCTCCTT------------------------------------------------
i Plecturocebus_bernhardi.k141_2549090                   C 0 N 0
s Plecturocebus_brunneus.k141_862875                          5781 18 -      9282 TG-TCTTAGGAC-CCTCCTT------------------------------------------------
i Plecturocebus_brunneus.k141_862875                     C 0 N 0
s Plecturocebus_caligatus.k141_1382851                       45185 18 -     87950 TG-TCTTAGGAC-CCTCCTT------------------------------------------------
i Plecturocebus_caligatus.k141_1382851                   C 0 N 0
s Plecturocebus_cinerascens.k141_1164729                     45579 18 -     88961 TG-TCTTAGGAC-CCTCCTT------------------------------------------------
i Plecturocebus_cinerascens.k141_1164729                 C 0 N 0
s Plecturocebus_cupreus.k141_2351393                         10277 18 -     39403 TG-TCTTAGGAC-CCTCCTT------------------------------------------------
i Plecturocebus_cupreus.k141_2351393                     C 0 N 0
s Plecturocebus_dubius.k141_1058799                          45229 18 +     87928 TG-TCTTAGGAC-CCTCCTT------------------------------------------------
i Plecturocebus_dubius.k141_1058799                      C 0 N 0
s Plecturocebus_grovesi.k141_2013005                         10276 18 -     60166 TG-TCTTAGGAC-CCTCCTT------------------------------------------------
i Plecturocebus_grovesi.k141_2013005                     C 0 N 0
s Plecturocebus_hoffmannsi.k141_3303950                      17197 18 -     67232 TG-TCTTAGGAC-CCTCCTT------------------------------------------------
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 N 0
s Plecturocebus_miltoni.k141_349282                          45129 18 -     90634 TG-TCTGAGGAC-CCTCCTT------------------------------------------------
i Plecturocebus_miltoni.k141_349282                      C 0 N 0
s Plecturocebus_moloch.k141_1031110                          46596 18 +     89403 TG-TCTTAGGAC-CCTCCTT------------------------------------------------
i Plecturocebus_moloch.k141_1031110                      C 0 N 0
s Pongo_abelii.CM009266.2                                   182734 65 - 189387572 TT-TCTTAGGCC-TCT-ctttgtgtccggaattggtgagttcttggtctcactgacttcaagaatgaa
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                      197476 65 -   9816681 TT-TCTTAGGCC-TCT-CTTtgtgtccagaattggtgagttcttggtctcactgacttcaagaatgaa
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              31245 17 +     69807 TT-TCGTAGGCC-TCT-CTT------------------------------------------------
i Presbytis_comata.k141_1230337                          C 0 N 0
s Presbytis_mitrata.k141_584736                              48428 17 -     80239 TT-TCGTAGGCC-TCT-CTT------------------------------------------------
i Presbytis_mitrata.k141_584736                          C 0 N 0
s Procavia_capensis.ProCapCap_scaffold_128773                 3152 18 -     12774 tt-tctgagatt-tctCTTG------------------------------------------------
i Procavia_capensis.ProCapCap_scaffold_128773            C 0 N 0
s Psammomys_obesus.NESX01036366.1                            41062 18 +     52041 tt-tcttaggtt-tcAACCA------------------------------------------------
i Psammomys_obesus.NESX01036366.1                        C 0 N 0
s Pteronotus_parnellii.KE847780.1                            56059 18 -     66298 tt-tcttagAGC-TACCCTG------------------------------------------------
i Pteronotus_parnellii.KE847780.1                        C 0 N 0
s Pteronura_brasiliensis.PteBra_flattened_line_48144          8419 18 -     18639 tc-tcttagacc-TACCCTG------------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_48144     C 0 N 0
s Pteropus_alecto.KB030862.1                               5844630 18 -  28871421 ct-tcttagAGA-TATCCTG------------------------------------------------
i Pteropus_alecto.KB030862.1                             C 0 N 0
s Pteropus_vampyrus.KN525825.1                             3541146 18 -   4952924 ct-tcttagAGA-TATCCTG------------------------------------------------
i Pteropus_vampyrus.KN525825.1                           C 0 N 0
s Puma_concolor.QAVW01001104.1                            18103174 18 +  38429054 TG-TCTGAGACC-TATCCTG------------------------------------------------
i Puma_concolor.QAVW01001104.1                           C 0 N 0
s Pygathrix_cinerea.k141_1153803                             30614 17 +     91421 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Pygathrix_cinerea.k141_1153803                         C 0 N 0
s Pygathrix_nigripes_b.ctg100                                  157165 17 -   7812017 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Pygathrix_nigripes_b.ctg100                               C 0 N 0
s Pygathrix_nigripes_a.k141_215492                             11465 17 +     72585 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Pygathrix_nigripes_a.k141_215492                         C 0 N 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                  5470 18 -     55207 ct-cctttggcc-tctccTG------------------------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 N 0
s Rattus_norvegicus.chr16                                 37026236 18 -  90668790 TT-TCTTAGGTT-TCAACTG------------------------------------------------
i Rattus_norvegicus.chr16                                C 0 N 0
s Rhinolophus_sinicus.LVEH01000134.1                       2918515 18 +   3329780 tt-tcttagAAC-TATCCTG------------------------------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 N 0
s Rhinopithecus_bieti.k119_778604                             5071 17 +      7119 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Rhinopithecus_bieti.k119_778604                        C 0 N 0
s Rhinopithecus_roxellana.NC_044550.1                    104125741 17 + 195417433 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Rhinopithecus_roxellana.NC_044550.1                    C 0 N 0
s Rhinopithecus_strykeri.ctg102                             239913 17 -   7961872 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Rhinopithecus_strykeri.ctg102                          C 0 N 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 79376 18 -    116970 CT-ACTTAGAGG-TATCCTG------------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 N 0
s Saguinus_bicolor.k141_161125                                9970 17 +     12412 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Saguinus_bicolor.k141_161125                           C 0 N 0
s Saguinus_geoffroyi.k141_356064                              1292 17 +      9876 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Saguinus_geoffroyi.k141_356064                         C 0 N 0
s Saguinus_imperator.k141_2710097                            16888 17 -     24931 TA-TCTTAGGCC-TCTCC-T------------------------------------------------
i Saguinus_imperator.k141_2710097                        C 0 N 0
s Saguinus_inustus.k141_4502137                               1767 17 +      4564 TG-TCTTAGGCC-TCTGC-T------------------------------------------------
i Saguinus_inustus.k141_4502137                          C 0 N 0
s Saguinus_labiatus.k141_264497                               4572 17 -      7443 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Saguinus_labiatus.k141_264497                          C 0 N 0
s Saguinus_midas.LG03                                       395604 17 - 209938924 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Saguinus_midas.LG03                                    C 0 N 0
s Saguinus_mystax.k141_6319370                                2189 17 +     10149 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Saguinus_mystax.k141_6319370                           C 0 N 0
s Saguinus_oedipus.k141_1368863                               1533 17 +     10417 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Saguinus_oedipus.k141_1368863                          C 0 N 0
s Saiga_tatarica.SaiTat_scaffold_39512                       14921 18 +     16473 ct-tctTTGGCC-TCCCCTG------------------------------------------------
i Saiga_tatarica.SaiTat_scaffold_39512                   C 0 N 0
s Saimiri_boliviensis.NW_024100920.1                       1111660 17 + 121099817 TG-TCTTAGGCC-TCTCC-T------------------------------------------------
i Saimiri_boliviensis.NW_024100920.1                     C 0 N 0
s Saimiri_cassiquiarensis.k141_1467335                       33229 17 -     47369 tg-tcttaggcc-tctcc-t------------------------------------------------
i Saimiri_cassiquiarensis.k141_1467335                   C 0 N 0
s Saimiri_macrodon.k141_1173117                              33612 17 -     79414 tg-tcttaggcc-tctcc-t------------------------------------------------
i Saimiri_macrodon.k141_1173117                          C 0 N 0
s Saimiri_oerstedii.k141_245838                              30303 17 -     34454 tg-tcttaggcc-tctcc-t------------------------------------------------
i Saimiri_oerstedii.k141_245838                          C 0 N 0
s Saimiri_sciureus.k141_1467173                              17705 17 -     22428 tg-tcttaggcc-tctcc-t------------------------------------------------
i Saimiri_sciureus.k141_1467173                          C 0 N 0
s Saimiri_ustus.k141_360372                                  32859 17 -     47109 tg-tcttaggcc-tctcc-t------------------------------------------------
i Saimiri_ustus.k141_360372                              C 0 N 0
s Sapajus_apella.ctg103                                     240882 17 +   5703754 TG-GCTTAGGCC-TCTCC-T------------------------------------------------
i Sapajus_apella.ctg103                                  C 0 N 0
s Sapajus_macrocephalus.k141_796559                          10473 17 +     21866 TG-GCTTAGGCC-TCTCC-T------------------------------------------------
i Sapajus_macrocephalus.k141_796559                      C 0 N 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    122964 18 +    313613 tt-tcttaggcc-tctccTG------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 N 0
s Semnopithecus_entellus.k141_583282                          2045 17 +     11297 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Semnopithecus_entellus.k141_583282                     C 0 N 0
s Semnopithecus_hypoleucos.k141_1910531                      32438 17 +     58920 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Semnopithecus_hypoleucos.k141_1910531                  C 0 N 0
s Semnopithecus_johnii.k141_843753                           18936 17 -     45317 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Semnopithecus_johnii.k141_843753                       C 0 N 0
s Semnopithecus_priam.k141_714795                            26594 17 -     42441 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Semnopithecus_priam.k141_714795                        C 0 N 0
s Semnopithecus_schistaceus.k141_1669243                      4235 17 -      6251 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Semnopithecus_schistaceus.k141_1669243                 C 0 N 0
s Semnopithecus_vetulus.k141_244474                          32358 17 -     48123 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Semnopithecus_vetulus.k141_244474                      C 0 N 0
s Sigmodon_hispidus.SigHis_scaffold_20193                    53118 18 +     77746 tt-tctagggtt-tcAACTG------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 2179
s Solenodon_paradoxus.SolPar_flattened_line_126            1867724 18 -   1910179 tt-tctgagacc-tctcctg------------------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 N 0
s Sorex_araneus.JH798187.1                                 4674940 18 +  18376816 tt-tcttagacc-tcCCCGG------------------------------------------------
i Sorex_araneus.JH798187.1                               C 0 N 0
s Spermophilus_dauricus.KZ294078.1                         1872534 18 +   3870691 tt-ttgcagtcc-tctccTG------------------------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 N 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             17105 18 -     97271 tc-tcttagACT-TATCCTG------------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 N 0
s Suricata_suricatta.SurSur_flattened_line_6629             129269 18 +    196729 TT-TCTGAGTCC-TATCCTG------------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 N 0
s Sus_scrofa.CM000828.4                                    6648562 18 +  69701581 ct-ttttaggcc-tctcctc------------------------------------------------
i Sus_scrofa.CM000828.4                                  C 0 N 0
s Symphalangus_syndactylus.tarseq_199                       394434 65 +   1523678 TT-TCTTAGGTC-TCT-CTTtgtgtccggaattggtgggatcttggtctcactgacttcaggaatgaa
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_54991                17976 18 +     22964 tc-tcttagatG-TATCTCA------------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_54991            C 0 N 0
s Tapirus_indicus.TapInd_scaffold_7432                      195395 18 +    199430 ct-tcttagacc-TATCCTG------------------------------------------------
i Tapirus_indicus.TapInd_scaffold_7432                   C 0 N 0
s Tapirus_terrestris.TapTer_scaffold_755                    109375 18 -    539355 ct-tcttagacc-TATCCTG------------------------------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 N 0
s Tarsius_lariang.k141_1733899                                4985 18 +      9917 tt-tcttagAAT-TCTCCTG------------------------------------------------
i Tarsius_lariang.k141_1733899                           C 0 N 0
s Tarsius_wallacei.k141_226975                               11759 18 +     20590 TT-TCTTAGAAT-TCTCCTG------------------------------------------------
i Tarsius_wallacei.k141_226975                           C 0 N 0
s Theropithecus_gelada.CM009954.1                           356608 17 - 186847797 TT-TCTTAGGCT-GCT-CTT------------------------------------------------
i Theropithecus_gelada.CM009954.1                        C 0 N 0
s Thryonomys_swinderianus.ThrSwi_scaffold_33457              29176 17 -     33621 TT-TCTTAAA-A-TCTCTTG------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_33457          I 1 N 0
s Tolypeutes_matacus.TolMat_scaffold_31955                   22950 18 -     31044 ct-tcgtaggtg-tctcctg------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_31955               C 0 N 0
s Tonatia_saurophila.TonSau_scaffold_294                    484305 18 -    610378 tt-tctcagAAC-TATCCTG------------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 N 0
s Trachypithecus_auratus.k141_1189070                        24347 17 +     26378 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Trachypithecus_auratus.k141_1189070                    C 0 N 0
s Trachypithecus_crepusculus.k141_539312                     37145 17 -     78344 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Trachypithecus_crepusculus.k141_539312                 C 0 N 0
s Trachypithecus_cristatus.k141_180416                       23672 17 +     25722 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Trachypithecus_cristatus.k141_180416                   C 0 N 0
s Trachypithecus_francoisi.k141_1453105                      32101 17 -     62838 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Trachypithecus_francoisi.k141_1453105                  C 0 N 0
s Trachypithecus_geei.k141_1001272                           32092 17 +     46913 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Trachypithecus_geei.k141_1001272                       C 0 N 0
s Trachypithecus_germaini.k141_57262                         12830 17 -     28527 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Trachypithecus_germaini.k141_57262                     C 0 N 0
s Trachypithecus_hatinhensis.k141_31479                      34032 17 -     64340 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Trachypithecus_hatinhensis.k141_31479                  C 0 N 0
s Trachypithecus_laotum.k141_928651                          32070 17 -     63452 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Trachypithecus_laotum.k141_928651                      C 0 N 0
s Trachypithecus_leucocephalus.k141_96450                    13521 17 +     22490 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Trachypithecus_leucocephalus.k141_96450                C 0 N 0
s Trachypithecus_melamera.k141_750785                         1487 17 +      9911 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Trachypithecus_melamera.k141_750785                    C 0 N 0
s Trachypithecus_obscurus.k141_170351                         1282 17 -     33539 TT-TCTTAGGCC-CCT-CTT------------------------------------------------
i Trachypithecus_obscurus.k141_170351                    C 0 N 0
s Trachypithecus_phayrei.ctg124                             259041 17 -   6242583 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Trachypithecus_phayrei.ctg124                          C 0 N 0
s Trachypithecus_pileatus.k141_2622778                        5060 17 +     19340 TT-TCTTAGGCC-TCT-CTT------------------------------------------------
i Trachypithecus_pileatus.k141_2622778                   C 0 N 0
s Tragulus_javanicus.TraJav_scaffold_3462                   178165 18 -    200418 tt-tcttaggca-tctccTG------------------------------------------------
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 N 0
s Trichechus_manatus.JH594705.1                            6485958 18 -  10818551 ct-tcttgggtc-tctccTG------------------------------------------------
i Trichechus_manatus.JH594705.1                          C 0 N 0
s Tursiops_truncatus.MRVK01000835.1                       17369546 18 -  33153633 ct-tcttaggcc-tctccTG------------------------------------------------
i Tursiops_truncatus.MRVK01000835.1                      C 0 N 0
s Uropsilus_gracilis.UroGra_scaffold_46687                    7741 18 -     21056 TT-TCATAGGCT-TCTCTTG------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 N 0
s Ursus_maritimus.KK499267.1                                185846 18 +   5085361 tc-tctTATGCC-TATCCTG------------------------------------------------
i Ursus_maritimus.KK499267.1                             C 0 N 0
s Vicugna_pacos.KN270157.1                                   81182 18 +   5488506 TT-TCTTAGGCC-GCTCTTT------------------------------------------------
i Vicugna_pacos.KN270157.1                               I 505 I 21064
s Vulpes_lagopus.VulLag_flattened_line_12041                109198 18 -    112863 tc-tcttagacc-TATCCTG------------------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_12041             C 0 N 0
s Xerus_inauris.XerIna_scaffold_2302                        178403 18 -    224448 tt-ttgcagtcc-tctccTG------------------------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 N 0
s Zalophus_californianus.ZalCal_flattened_line_17732         32851 18 -     86975 tc-tcttagacc-tattcTG------------------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 N 0
s Zapus_hudsonius.ZapHud_scaffold_11398                       5118 18 -     63895 TT-TCTTAGATT-TCTACTG------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 3 N 0
s Ziphius_cavirostris.ZipCav_flattened_line_334639            1507 18 +      3447 ct-tcttaggcc-tctccTG------------------------------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_334639       C 0 N 0
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Loris_tardigradus.ctg83                                  5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628                            22548  0 -     32986 I

a score=0.000000
s hg38.chrUn_KI270755v1                        10466 593 +     36723  
s Gorilla_beringei.k141_935316                  1549 577 +     34797  
i Gorilla_beringei.k141_935316             C 0 N 0
s Gorilla_gorilla.LT578336.1                   76140 575 +  33314783  
i Gorilla_gorilla.LT578336.1               C 0 N 0
s Hoolock_leuconedys.ctg274                      146107 570 -    630532  
i Hoolock_leuconedys.ctg274                   C 0 N 0
s Hylobates_agilis.k141_1155965                 9152 570 +     12352  
i Hylobates_agilis.k141_1155965            C 0 N 0
s Hylobates_klossii.k141_738755                16339 570 +     55766  
i Hylobates_klossii.k141_738755            C 0 N 0
s Hylobates_pileatus_b.LG02                         2055869 570 + 191637585  
i Hylobates_pileatus_b.LG02                       C 0 N 0
s Hylobates_pileatus_a.tarseq_633              7804747 570 +  11177569  
i Hylobates_pileatus_a.tarseq_633            C 0 N 0
s Nomascus_annamensis.k141_1771965             57041 570 -    132029  
i Nomascus_annamensis.k141_1771965         C 0 N 0
s Nomascus_concolor.k141_735679                13136 570 -     16345  
i Nomascus_concolor.k141_735679            C 0 N 0
s Nomascus_gabriellae.k141_57920               19025 570 +     22201  
i Nomascus_gabriellae.k141_57920           C 0 N 0
s Nomascus_siki_b.tarseq_93              8417255 568 -  22158432  
i Nomascus_siki_b.tarseq_93            C 0 N 0
s Nomascus_siki_a.k141_941534                    29430 570 -     54323  
i Nomascus_siki_a.k141_941534                C 0 N 0
s Pan_paniscus.AJFE02004364.1                      0 286 +      5435  
i Pan_paniscus.AJFE02004364.1              N 0 N 0
s Pan_troglodytes.NBAG03003182.1               16824 576 -     24457  
i Pan_troglodytes.NBAG03003182.1           I 100 N 0
s Pongo_abelii.CM009266.2                     182799 577 - 189387572  
i Pongo_abelii.CM009266.2                  C 0 N 0
s Pongo_pygmaeus.ctg66                        197541 577 -   9816681  
i Pongo_pygmaeus.ctg66                     C 0 N 0
s Symphalangus_syndactylus.tarseq_199         394499 570 +   1523678  
i Symphalangus_syndactylus.tarseq_199      C 0 N 0
e Microgale_talazaci.MicTal_scaffold_6613      50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1           9114138 13034 -  10337057 I
e Loris_tardigradus.ctg83                    5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628              22548   0 -     32986 I
e Vicugna_pacos.KN270157.1                     81200 21064 +   5488506 I
e Sigmodon_hispidus.SigHis_scaffold_20193      53136 2179 +     77746 I
e Peromyscus_maniculatus.KI615324.1           251313 2204 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377      8161 2185 -     41509 I
e Microtus_ochrogaster.CM001695.1           15966960 2106 +  27267610 I
e Mesocricetus_auratus.KB708134.1           17433658 2212 +  29670104 I
e Ellobius_lutescens.LOEQ01008920.1            35552 14855 +    110024 I
e Cricetulus_griseus.LT883664.1            213119364 2169 - 224834208 I
e Camelus_ferus.KB017975.1                   1213827 21189 +   1652518 I
e Camelus_dromedarius.KN272107.1             4670129 20957 +   7040546 I
e Camelus_bactrianus.KN276810.1              7635828 20927 +  17673402 I
e Bos_indicus.CM003047.1                    28423942   1 -  48749331 I
e Acinonyx_jubatus.LLWD01001279.1             816951 19385 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                        11059 2 +     36723 AA
s Pan_troglodytes.CM009242.2               187649063 2 + 189151597 AA
i Pan_troglodytes.CM009242.2               N 0 C 0
e Microgale_talazaci.MicTal_scaffold_6613      50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1           9114138 13034 -  10337057 I
e Loris_tardigradus.ctg83                    5046302 43557 -   6120653 I
e Galagoides_demidoff.k141_561628              22548 0 -     32986 I
e Vicugna_pacos.KN270157.1                     81200 21064 +   5488506 I
e Sigmodon_hispidus.SigHis_scaffold_20193      53136 2179 +     77746 I
e Peromyscus_maniculatus.KI615324.1           251313 2204 +  18517816 I
e Onychomys_torridus.OnyTor_scaffold_28377      8161 2185 -     41509 I
e Microtus_ochrogaster.CM001695.1           15966960 2106 +  27267610 I
e Mesocricetus_auratus.KB708134.1           17433658 2212 +  29670104 I
e Ellobius_lutescens.LOEQ01008920.1            35552 14855 +    110024 I
e Cricetulus_griseus.LT883664.1            213119364 2169 - 224834208 I
e Camelus_ferus.KB017975.1                   1213827 21189 +   1652518 I
e Camelus_dromedarius.KN272107.1             4670129 20957 +   7040546 I
e Camelus_bactrianus.KN276810.1              7635828 20927 +  17673402 I
e Bos_indicus.CM003047.1                    28423942 1 -  48749331 I
e Acinonyx_jubatus.LLWD01001279.1             816951 19385 +   1699592 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11061 33 +     36723 A-GG-CC---T-TA--------------TACC----TGG----------G-AAAAAG-G-------------AA--AGACA---------------AAG
s Acinonyx_jubatus.LLWD01001279.1                           836336 37 +   1699592 a-gg-tc---tcta--------------tagc----agg----------a-agaagc-a-------------aa-gaaact------------ata-aa
i Acinonyx_jubatus.LLWD01001279.1                        I 19385 I 1
s Acomys_cahirinus.AcoCah_scaffold_21377                     10603 34 -     63021 A-GT-TC---T-CC--------------TATG----TGG----------G-GA--AG-G-------------AA-TAGA---AT--A-----TA---AG
i Acomys_cahirinus.AcoCah_scaffold_21377                 N 0 I 1
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538267 37 -  29979442 a-ga-tc---tgca--------------tagc----agg----------a-agaagc-a-------------aa-gagact------------ata-gg
i Ailuropoda_melanoleuca.LNAT01000098.1                  N 0 I 1
s Ailurus_fulgens.LNAC01001112.1                            107718 37 -    347723 a-gg-tc---ttta--------------tagc----aag----------a-agaaaa-a-------------aa-gagact------------aca-gg
i Ailurus_fulgens.LNAC01001112.1                         N 0 I 1
s Allactaga_bullata.AllBul_scaffold_20030                     1315  2 +     61208 -------------------------------------------------------------------------------------------------AA
i Allactaga_bullata.AllBul_scaffold_20030                N 0 I 1
s Allenopithecus_nigroviridis.k141_3361533                   40625 30 -     52922 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaagg-g-------------aa--agac------------------g
i Allenopithecus_nigroviridis.k141_3361533               N 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          6947 30 +     11307 a-gg-cc---t-tg--------------tgcc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Allochrocebus_lhoesti.k141_1932296                     N 0 C 0
s Allochrocebus_preussi.k141_499905                           7119 30 -     13300 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Allochrocebus_preussi.k141_499905                      N 0 C 0
s Allochrocebus_solatus.k141_139760                           9000 30 +     12926 a-gg-cc---t-tg--------------tgcc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Allochrocebus_solatus.k141_139760                      N 0 C 0
s Alouatta_belzebul.k141_3560514                             31660 33 +     51355 a-gg-cc---t-ta--------------caca----tgg----------g-aagatg-g-------------aa--ggaca---------------aag
i Alouatta_belzebul.k141_3560514                         N 0 I 1
s Alouatta_caraya.k141_1701091                               24806 33 -     36483 a-gg-cc---t-ta--------------cacc----tgg----------g-aagatg-g-------------aa--ggaca---------------aag
i Alouatta_caraya.k141_1701091                           N 0 I 1
s Alouatta_discolor.k141_1945310                              6911 33 -     13496 a-gg-cc---t-ta--------------caca----tgg----------g-aagatg-g-------------aa--ggaca---------------aag
i Alouatta_discolor.k141_1945310                         N 0 I 1
s Alouatta_juara.k141_1302312                                23693 33 +     27940 A-GG-CC---T-TA--------------CACC----TGG----------G-AAGATG-G-------------AA--GGACA---------------AAG
i Alouatta_juara.k141_1302312                            N 0 I 1
s Alouatta_macconnelli.k141_623179                           15501 33 -     39310 A-GG-CC---T-TA--------------CACC----TGG----------G-AAGATG-G-------------AA--GGACA---------------AAG
i Alouatta_macconnelli.k141_623179                       N 0 I 1
s Alouatta_nigerrima.k141_1929159                            23759 33 +     30492 a-gg-cc---t-ta--------------cacc----tgg----------g-aagatg-g-------------aa--ggaca---------------aag
i Alouatta_nigerrima.k141_1929159                        N 0 I 1
s Alouatta_palliata.k141_2135620                             27990 33 +     47717 a-gg-cc---t-ta--------------cacc----tgg----------g-aagatg-g-------------aa--ggaca---------------aag
i Alouatta_palliata.k141_2135620                         N 0 I 1
s Alouatta_puruensis.k141_2029433                            78962 33 +     87306 a-gg-cc---t-ta--------------cacc----tgg----------g-aagatg-g-------------aa--ggaca---------------aag
i Alouatta_puruensis.k141_2029433                        N 0 I 1
s Alouatta_seniculus.k141_117119                             38944 33 +     50774 A-GG-CC---T-TA--------------CACC----TGG----------G-AAGATG-G-------------AA--GGACA---------------AAG
i Alouatta_seniculus.k141_117119                         N 0 I 1
s Ammotragus_lervia.NIVO01071767.1                          707684 36 -   2318259 a-gc-cc---t-ta--------------tcct----ggg----------a-agaagc-a-------------ac-gcaaat------------aca-ag
i Ammotragus_lervia.NIVO01071767.1                       N 0 I 1
s Anoura_caudifer.AnoCau_scaffold_1412                      209489  7 +    412891 a-CT-AC---C-C--------------------------------------------------------------------------------------
i Anoura_caudifer.AnoCau_scaffold_1412                   N 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_43303             26910 36 -     32520 a-gc-cc---t-ta--------------tcct----ggg----------a-agaagc-a-------------aa-gtaaac------------aca-ag
i Antilocapra_americana.AntAmePen_scaffold_43303         N 0 I 1
s Aotus_azarae.k141_2596348                                   5192 33 +     12024 a-cg-cc---t-ta--------------cgcc----tgg----------g-aagatg-g-------------aa--ggaca---------------aag
i Aotus_azarae.k141_2596348                              N 0 I 1
s Aotus_griseimembra.k141_2227177                             4858 33 -     10972 a-gg-cc---t-ta--------------cgcc----tgg----------g-aagatg-g-------------aa--ggaca---------------aag
i Aotus_griseimembra.k141_2227177                        N 0 I 1
s Aotus_nancymaae.KZ198451.1                               4333319 33 -   5030052 A-GG-CC---T-TA--------------CGCC----TGG----------G-AAGATG-G-------------AA--GGACA---------------AAG
i Aotus_nancymaae.KZ198451.1                             N 0 I 1
s Aotus_trivirgatus.k141_1801223                              5251 33 -     12698 a-gg-cc---t-ta--------------cgcc----tgg----------g-aagatg-g-------------aa--ggaca---------------aag
i Aotus_trivirgatus.k141_1801223                         N 0 I 1
s Aotus_vociferans.k141_506037                                4711 33 -     11998 a-gg-cc---t-ta--------------cgcc----tgg----------g-aagatg-g-------------aa--ggaca---------------aag
i Aotus_vociferans.k141_506037                           N 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_37633                      22123 36 +     39421 a-gt-cc---t-ta--------------tatc----tag----------a-gaaagg-g-------------aa-gaga------------atata-ag
i Aplodontia_rufa.AprRuf_scaffold_37633                  N 0 I 1
s Arctocebus_calabarensis.k141_1364444                       14196 37 +     45910 A-GG-CC---T-TA--------------CATC----TGG----------ACAAAAAG-G-------------AA--AGAGA-AT--A--------C-TG
i Arctocebus_calabarensis.k141_1364444                   N 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_25439                 26939  7 +     43469 a-CT-AC---T-C--------------------------------------------------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_25439             N 0 I 3
s Ateles_geoffroyi_b.tarseq_1536                             21231955 33 -  21539123 a-gg-cc---t-ta--------------cacc----tgg----------g-aagatg-g-------------aa--gggca---------------aag
i Ateles_geoffroyi_b.tarseq_1536                            N 0 I 1
s Ateles_belzebuth.k141_1572163                               3027 33 -     48076 a-gg-cc---t-ta--------------cacc----tgg----------g-aagatg-g-------------aa--ggaca---------------aag
i Ateles_belzebuth.k141_1572163                          N 0 I 1
s Ateles_chamek.k141_2083276                                 18493 33 -     22344 a-gg-cc---t-ta--------------cacc----tgg----------g-aagatg-g-------------aa--gggca---------------aag
i Ateles_chamek.k141_2083276                             N 0 I 1
s Ateles_geoffroyi_a.k141_833924                               31549 33 -     89868 a-gg-cc---t-ta--------------cacc----tgg----------g-aagatg-g-------------aa--gggca---------------aag
i Ateles_geoffroyi_a.k141_833924                           N 0 I 1
s Ateles_marginatus.k141_803263                              35962 33 -     40414 a-gg-cc---t-ta--------------cacc----tgg----------g-aagatg-g-------------aa--ggaca---------------aag
i Ateles_marginatus.k141_803263                          N 0 I 1
s Ateles_paniscus.k141_457735                                43796 33 +     72325 a-gg-cc---t-ta--------------cacc----tgg----------g-aagatg-g-------------aa--gggca---------------aag
i Ateles_paniscus.k141_457735                            N 0 I 1
s Avahi_laniger.k141_765380                                  75547 36 -     92717 a-gg-cc---t-ca--------------tatc----tgg----------g-aaaaag-g-------------aa--agaga-----------ccac-ta
i Avahi_laniger.k141_765380                              N 0 I 1
s Avahi_peyrierasi.k141_1424874                              76130 36 +     85213 a-gg-cc---t-ca--------------tatc----tgg----------g-aaaaag-g-------------aa--agaga-----------ccac-ta
i Avahi_peyrierasi.k141_1424874                          N 0 I 1
s Balaenoptera_acutorostrata.KI537508.1                   15222339 36 +  23207421 a-gc-cc---t-ta--------------cact----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Balaenoptera_acutorostrata.KI537508.1                  N 0 I 1
s Balaenoptera_bonaerensis.DF411050.1                         4342 36 +     25979 a-gc-cc---t-ta--------------cact----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Balaenoptera_bonaerensis.DF411050.1                    N 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_7278                     12738 36 -    124022 a-gc-cc---t-ta--------------tcct----ggg----------a-agaagc-a-------------at-gcaaat------------aca-ag
i Beatragus_hunteri.BeaHun_scaffold_7278                 N 0 I 1
s Bison_bison.KN261452.1                                    232916 36 -    288883 a-tc-cc---c-ta--------------tcat----ggg----------a-agaagc-a-------------aa-gcgaat------------aca-ag
i Bison_bison.KN261452.1                                 N 0 I 1
s Bos_indicus.CM003047.1                                  20306291 36 +  48749331 a-gc-cc---c-ta--------------tcat----ggg----------a-agaagc-a-------------aa-gcgaat------------aca-ag
i Bos_indicus.CM003047.1                                 T 55396 I 1
s Bos_mutus.JH880303.1                                     1159393 36 -   1948126 a-gc-cc---c-ta--------------tcat----ggg----------a-agaagc-a-------------aa-gcgaat------------aca-ag
i Bos_mutus.JH880303.1                                   N 0 I 1
s Bos_taurus.CM000203.6                                   18116503 36 +  45695690 a-gc-cc---c-ta--------------tcat----ggg----------a-agaagc-a-------------aa-gcgaat------------aca-ag
i Bos_taurus.CM000203.6                                  N 0 I 1
s Bubalus_bubalis.KI419123.1                               2851342 36 +   4408762 a-gc-cc---t-ta--------------tcct----gga----------a-agaagc-a-------------aa-gcgaat------------aca-ag
i Bubalus_bubalis.KI419123.1                             N 0 I 1
s Cacajao_ayresi.k141_552049                                116819 33 -    122966 A-GC-CC---T-TA--------------CACC----TGG----------G-AAAGTG-G-------------AA--AGACA---------------AAG
i Cacajao_ayresi.k141_552049                             N 0 I 1
s Cacajao_calvus.k141_5142                                   76297 33 +     81800 A-GC-CC---T-TA--------------CACC----TGG----------G-AAAGTG-G-------------AA--AGACA---------------AAG
i Cacajao_calvus.k141_5142                               N 0 I 1
s Cacajao_hosomi.k141_81245                                  45502 33 -     95584 A-GC-CC---T-TA--------------CACC----TGG----------G-AAAGTG-G-------------AA--AGACA---------------AAG
i Cacajao_hosomi.k141_81245                              N 0 I 1
s Cacajao_melanocephalus.k141_619699                         69597 33 -    119600 a-gc-cc---t-ta--------------cacc----tgg----------g-aaagtg-g-------------aa--agaca---------------aag
i Cacajao_melanocephalus.k141_619699                     N 0 I 1
s Camelus_bactrianus.KN276810.1                           10020324 36 -  17673402 a-gg-cc---t-ca--------------tact----ggg----------a-agaagc-a-------------aa-gagagc------------ata-cg
i Camelus_bactrianus.KN276810.1                          n 20927 I 1
s Camelus_dromedarius.KN272107.1                           2353154 36 -   7040546 a-gg-cc---t-ca--------------tact----ggg----------a-agaagc-a-------------aa-gagagc------------ata-cg
i Camelus_dromedarius.KN272107.1                         n 20957 I 1
s Camelus_ferus.KB017975.1                                  421413 36 -   1652518 a-gg-cc---t-ca--------------tact----ggg----------a-agaagc-a-------------aa-gagagc------------ata-cg
i Camelus_ferus.KB017975.1                               n 21189 I 1
s CanFam4.chr16                                           17831609 37 -  60362399 a-gg-tc---ttta--------------tagc----agg----------a-agaagc-a-------------aa-gagact------------ata-gg
i CanFam4.chr16                                          N 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32353 37 -     43241 a-gg-tc---ttta--------------tagc----agg----------a-agaagc-a-------------aa-gagact------------ata-gg
i Canis_lupus_VD.CanFam_VD_scaffold_27089                N 0 I 1
s Canis_lupus_dingo.QKWQ01000480.1                         9067077 37 -   9314153 a-gg-tc---ttta--------------tagc----agg----------a-agaagc-a-------------aa-gagact------------ata-gg
i Canis_lupus_dingo.QKWQ01000480.1                       N 0 I 1
s Canis_lupus_familiaris.chr16                            17991736 37 -  59632846 a-gg-tc---ttta--------------tagc----agg----------a-agaagc-a-------------aa-gagact------------ata-gg
i Canis_lupus_familiaris.chr16                           N 0 I 1
s Canis_lupus_orion.HG994398.1                            18532842 37 +  63665305 a-gg-tc---ttta--------------tagc----agg----------a-agaagc-a-------------aa-gagact------------ata-gg
i Canis_lupus_orion.HG994398.1                           N 0 I 1
s Capra_aegagrus.CM003241.1                               18861747 36 +  46296322 A-GC-CC---T-TA--------------TCCT----GGG----------A-AGAAGC-A-------------AC-GCAAAT-A--CA----------AG
i Capra_aegagrus.CM003241.1                              N 0 I 1
s Capra_hircus.CM004588.1                                 18092465 36 -  44709034 a-gc-cc---t-tA--------------TCCT----GGG----------A-AGAAGC-A-------------AC-GCAAAT-A--CA----------AG
i Capra_hircus.CM004588.1                                N 0 I 1
s Carlito_syrichta.NW_007259797.1                           179769 37 -    496798 G-GG-CC---T-TA--------------CATC----AGg----------c-caaaag-g-------------aa--agaga-----------atacaAG
i Carlito_syrichta.NW_007259797.1                        N 0 I 1
s Carollia_perspicillata.CarPer_scaffold_737331                414  7 -       918 a-CT-AC---T-C--------------------------------------------------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_737331          N 0 I 3
s Castor_canadensis.CasCan_scaffold_2074                    167003 36 +    179628 A-GT-CC---T-TC--------------TATC----TGA----------G-GAAAAG-G-------------AA-GATA---AT--A-----TA---AG
i Castor_canadensis.CasCan_scaffold_2074                 N 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                    113286 37 +    217609 a-gg-tt---t-ta--------------tgct----gtg----------a-agaagc-a-------------aaaaaaaat------------ata-ag
i Catagonus_wagneri.CatWag_scaffold_2839                 N 0 I 1
s Cebus_albifrons.Contig27                                25675441 33 +  26074798 a-gg-cc---t-ta--------------cacc----tgg----------g-aagagg-g-------------aa--ggaca---------------aag
i Cebus_albifrons.Contig27                               N 0 I 1
s Cebus_olivaceus.k141_1764483                               21909 33 +     28840 a-gg-cc---t-ta--------------cacc----tgg----------g-aagagg-g-------------aa--ggaca---------------aag
i Cebus_olivaceus.k141_1764483                           N 0 I 1
s Cebus_unicolor.k141_547207                                  7580 33 +     13997 a-gg-cc---t-ta--------------cacc----tgg----------g-aagagg-g-------------aa--ggaca---------------aag
i Cebus_unicolor.k141_547207                             N 0 I 1
s Cephalopachus_bancanus.k141_1423433                        29694 37 +     31688 G-GG-CC---T-TA--------------CATC----AGG----------C-CAAAAG-G-------------AA--AGAGA-AT--A--------CAAG
i Cephalopachus_bancanus.k141_1423433                    N 0 I 1
s Ceratotherium_simum.JH767749.1                          12257118 35 +  27778364 a-gg-cc---t-t---------------tacc----tgg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Ceratotherium_simum.JH767749.1                         N 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          2825 35 +     15641 a-gg-cc---t-a---------------tacc----tgg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     N 0 I 1
s Cercocebus_atys.KQ010504.1                               4501599 30 +   4669795 A-GG-CC---T-TG--------------TAcc----tgg----------g-aaaaag-g-------------aa--agac------------------G
i Cercocebus_atys.KQ010504.1                             N 0 C 0
s Cercocebus_chrysogaster.k141_2766003                       22871 30 -     30935 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Cercocebus_chrysogaster.k141_2766003                   N 0 C 0
s Cercocebus_lunulatus.k141_245046                            7273 30 +     18174 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Cercocebus_lunulatus.k141_245046                       N 0 C 0
s Cercocebus_torquatus.k141_4063387                           7110 30 +     18249 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Cercocebus_torquatus.k141_4063387                      N 0 C 0
s Cercopithecus_ascanius.k141_4281816                         2230 29 -      5884 a--g-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Cercopithecus_ascanius.k141_4281816                    N 0 C 0
s Cercopithecus_cephus.k141_1630443                           1254 29 +      4620 A--G-CC---T-TG--------------TGCC----TGG----------G-AAAAAG-G-------------AA--AGAC------------------G
i Cercopithecus_cephus.k141_1630443                      N 0 C 0
s Cercopithecus_diana.k141_488174                             7690 29 +     10982 A--G-CC---T-TG--------------TACC----TGG----------G-AAAAAG-G-------------AA--AGAC------------------G
i Cercopithecus_diana.k141_488174                        N 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1235 30 +      4810 a-gg-cc---t-tg--------------tgcc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Cercopithecus_hamlyni.k141_1302205                     N 0 C 0
s Cercopithecus_lowei.k141_4082698                            7151 30 +     34178 ag-g-cc---t-tg--------------tgcc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Cercopithecus_lowei.k141_4082698                       N 0 C 0
s Cercopithecus_albogularis.ctg5                                38849262 29 +  39242232 a--g-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Cercopithecus_albogularis.ctg5                               N 0 C 0
s Cercopithecus_mona.ctg39                                21252861 30 -  21565898 ag-g-cc---t-tg--------------tgcc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Cercopithecus_mona.ctg39                               N 0 C 0
s Cercopithecus_neglectus.k141_557928                         7317 30 -     18401 a--ggcc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Cercopithecus_neglectus.k141_557928                    N 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7381 29 -     15013 A--G-CC---T-TG--------------TACC----TGG----------G-AAAAAG-G-------------AA--AGAC------------------G
i Cercopithecus_nictitans.k141_1200139                   N 0 C 0
s Cercopithecus_petaurista.k141_365908                        7352 29 +     11214 A--G-CC---T-TG--------------TACC----TGG----------G-AAAAAG-G-------------AA--AGAC------------------G
i Cercopithecus_petaurista.k141_365908                   N 0 C 0
s Cercopithecus_pogonias.k141_391400                          2172 29 -     13831 a--g-cc---t-tg--------------tccc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Cercopithecus_pogonias.k141_391400                     N 0 C 0
s Cercopithecus_roloway.k141_1248991                         27346 29 +     68532 a--g-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Cercopithecus_roloway.k141_1248991                     N 0 C 0
s Cheirogaleus_major.k141_333249                             43537 35 -     52598 a-gg-tc---t-ta--------------tatc----tgg----------g-aaaa-g-g-------------aa--agaga-----------ccat-ga
i Cheirogaleus_major.k141_333249                         N 0 I 1
s Cheirogaleus_medius.k141_1055463                           38870 35 +     57038 a-gg-tc---t-ta--------------tatc----tgg----------g-gaaa-g-g-------------aa--agaga-----------ccat-ga
i Cheirogaleus_medius.k141_1055463                       N 0 I 1
s Cheracebus_lucifer.k141_49986                               9718 33 -     17098 A-GG-CC---T-CA--------------CACC----TGG----------G-AAGATG-G-------------AA--AGACA---------------AAG
i Cheracebus_lucifer.k141_49986                          N 0 I 1
s Cheracebus_lugens.k141_1393925                              9588 33 +     17877 A-GG-CC---T-AA--------------CACC----TGG----------G-AAGATG-G-------------AA--AGACA---------------AAG
i Cheracebus_lugens.k141_1393925                         N 0 I 1
s Cheracebus_regulus.k141_471822                            167155 33 -    216457 a-gg-cc---t-ca--------------cacc----tgg----------g-aagatg-g-------------aa--agaca---------------aag
i Cheracebus_regulus.k141_471822                         N 0 I 1
s Cheracebus_torquatus.k141_1170026                          71628 33 +     76511 A-GG-CC---T-CA--------------CACC----TGG----------G-AAGATG-G-------------AA--AGACA---------------AAG
i Cheracebus_torquatus.k141_1170026                      N 0 I 1
s Chiropotes_israelita.k141_747660                          113844 33 +    146308 a-gc-cc---t-ta--------------cacc----tgg----------g-aaagtg-g-------------aa--agaca---------------aag
i Chiropotes_israelita.k141_747660                       N 0 I 1
s Chiropotes_sagulatus.k141_1421488                          45752 33 -     50570 A-GC-CC---T-TA--------------CACC----TGG----------G-AAAGTG-G-------------AA--AGACA---------------AAG
i Chiropotes_sagulatus.k141_1421488                      N 0 I 1
s Chlorocebus_aethiops.ctg25                              18455129 30 -  18827391 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Chlorocebus_aethiops.ctg25                             N 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41072 30 -     50209 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Chlorocebus_pygerythrus.k141_1025673                   N 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448054 30 + 135778131 A-GG-CC---T-TG--------------TACC----TGG----------G-AAAAAG-G-------------AA--AGAC------------------G
i Chlorocebus_sabaeus.CM001947.1                         N 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   617 36 -     25429 a-gg-ct---t-tg--------------tgcc----agg----------a-agaagc-A-------------AA-ACCAAT-AT--A----------AG
i Choloepus_didactylus.ChoDid_scaffold_22546             N 0 C 0
s Choloepus_hoffmanni.KN194906.1                            195745 36 +    839153 a-gg-ct---t-tg--------------tgcc----agg----------a-agaagc-a-------------aaa-ccaat------------ata-ag
i Choloepus_hoffmanni.KN194906.1                         N 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               6451 33 -      9651 g-agaac---c-taggacatgctacatctaag----tgc----------t-at----------------------------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          N 0 I 4
s Colobus_angolensis.KN981557.1                            1935995 30 +   2368649 A-GG-CC---T-TG--------------TACC----TGG----------G-AAAAAG-G-------------AA--AGAC------------------G
i Colobus_angolensis.KN981557.1                          N 0 C 0
s Colobus_guereza.LG01                                   199969973 30 + 200372422 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Colobus_guereza.LG01                                   N 0 C 0
s Colobus_polykomos.k141_906115                              58287 30 +     84244 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Colobus_polykomos.k141_906115                          N 0 C 0
s Condylura_cristata.JH655891.1                           17566193 36 -  53390261 A-GA-GC---T-TA--------------AAAG----GGG----------A-AGAAGC-A-------------AA-GAGAAT------------gtt-aa
i Condylura_cristata.JH655891.1                          N 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_153350           113 14 +      5041 A-GT-GT---C-CA--------------CCCA----GA-------------------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_153350     N 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_14425                 16515 25 +     83289 -------------------------------C----TGA----------G-GAAAAG-A-------------AA-AAGA---ATGTA----------AA
i Cricetomys_gambianus.CriGam_scaffold_14425             N 0 I 1
s Cricetulus_griseus.LT883664.1                           11697135 37 + 224834208 A-GT-TC---T-CC--------------TAGC----TGG----------G-GAAAAG-G-------------GA-GAGG---CT--A-----TA-C-AG
i Cricetulus_griseus.LT883664.1                          n 2169 I 1
s Crocidura_indochinensis.CroInd_scaffold_123729              8545 43 -      9007 A-AA-GC---T-TA--------------TACG----AGGTGGGTTGGTGG-GGGCAA-A-------------GA-GAAAC---T-------------AA
i Crocidura_indochinensis.CroInd_scaffold_123729         N 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59051 37 -     87169 a-ga-tc---ccta--------------gagc----agg----------a-agaagc-a-------------aa-gaaact------------gta-aa
i Cryptoprocta_ferox.CryFer_flattened_line_16129         N 0 I 1
s Dasypus_novemcinctus.JH564415.1                            92227 23 +   2246927 ------------------------------------GAG----------A-AGAGGC-A--------------G-GCGAGT------------aca-ag
i Dasypus_novemcinctus.JH564415.1                        N 0 I 1
s Daubentonia_madagascariensis.ctg71                      12562308 36 -  12879189 a-cg-cc---t-tc--------------tctc----tgg----------g-agaaag-g-------------aa--agaga-----------ccat-aa
i Daubentonia_madagascariensis.ctg71                     N 0 I 1
s Delphinapterus_leucas.KZ290073.1                        16841490 36 +  35494412 a-gc-cc---t-ta--------------cact----ggg----------a-agaaac-a-------------aa-gagaat------------ata-ag
i Delphinapterus_leucas.KZ290073.1                       N 0 I 1
s Desmodus_rotundus.KZ672289.1                             8650430  7 +  20541912 a-CT-AC---C-C--------------------------------------------------------------------------------------
i Desmodus_rotundus.KZ672289.1                           N 0 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  698914 35 +   1390856 a-gg-cc---t-t---------------tacc----tgg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Dicerorhinus_sumatrensis.PEKH010002091.1               N 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_5955                   31716 35 +    198055 a-gg-cc---t-t---------------tacc----tgg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Diceros_bicornis.DicBicMic_scaffold_5955               N 0 I 1
s Dipodomys_ordii.KN672350.1                              18914553 17 +  37912305 A-GT-CA---T-CA--------------TATT----TGT----------A-A-----------------------------------------------
i Dipodomys_ordii.KN672350.1                             N 0 I 8
s Dipodomys_stephensi.DipSte_scaffold_47531                  13151 17 -     26976 A-GT-CA---T-CA--------------TATT----TGT----------A-A-----------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_47531              N 0 I 8
s Eidolon_helvum.KE797349.1                                  19330 13 -     31197 --at-gc---c-cA--------------CCCA----GA-------------------------------------------------------------
i Eidolon_helvum.KE797349.1                              N 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       341917 36 +    607251 a-gc-cc---t-ta--------------tcct----gag----------a-agaagc-a-------------aa-gcaaat------------aca-ag
i Elaphurus_davidianus.JRFZ01104969.1                    N 0 I 1
s Ellobius_lutescens.LOEQ01008920.1                          47532 36 -    110024 A-GT-TC---T-CC--------------TAtc----tgg----------g-gaaaag-g-------------aa-gaga---atatA----------AG
i Ellobius_lutescens.LOEQ01008920.1                      n 14855 I 1
s Ellobius_talpinus.LOJH01050844.1                            8784 37 +     12610 A-GT-TC---T-CC--------------TGtc----tgg----------g-gaaaag-g-------------aa-gaga---------atatTA---AG
i Ellobius_talpinus.LOJH01050844.1                       N 0 I 1
s Enhydra_lutris.KZ291758.1                               16365614 37 -  41312741 a-gg-tc---ttta--------------tagc----aag----------a-agaagc-a-------------aa-gagact------------aca-gg
i Enhydra_lutris.KZ291758.1                              N 0 I 1
s Equus_asinus.JREZ01000139.1                              1310221 36 +   4378816 t-gg-cc---c-ta--------------cacc----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Equus_asinus.JREZ01000139.1                            N 0 I 1
s Equus_caballus.CM000403.2                               18557689 36 -  39960074 t-gg-cc---c-tg--------------cacc----ggg----------a-agaagc-a-------------aa-gagaat------------ata-aa
i Equus_caballus.CM000403.2                              N 0 I 1
s Equus_przewalskii.KK951119.1                               59730 36 +    498745 t-gg-cc---c-tg--------------cacc----ggg----------a-agaagc-a-------------aa-gagaat------------ata-aa
i Equus_przewalskii.KK951119.1                           N 0 I 1
s Erinaceus_europaeus.JH835339.1                           3364847 35 -   7059049 A-GA-T----A-TA--------------TACT----AGA----------A-AGATGT-A-------------AA-taaaac-----------agag--g
i Erinaceus_europaeus.JH835339.1                         N 0 I 238
s Erythrocebus_patas.Contig38                             21237335 30 -  21539334 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Erythrocebus_patas.Contig38                            N 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           40672 36 +    133382 a-gc-cc---t-ta--------------cact----ggg----------a-aggagc-a-------------aa-gagaat------------atg-ag
i Eschrichtius_robustus.EscRob_flattened_line_8968       N 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_57114              4965 36 -     25849 a-gc-cc---t-ta--------------cact----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Eubalaena_japonica.EubJap_flattened_line_57114         N 0 I 1
s Eulemur_albifrons.k141_1869827                             12655 36 -     21348 a-gg-cc---t-tg--------------tatc----tgg----------a-acaaag-g-------------aa--agaga-----------ccac-aa
i Eulemur_albifrons.k141_1869827                         N 0 I 1
s Eulemur_collaris.k141_601111                                9857 36 +     70999 a-gg-cc---t-tg--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac-aa
i Eulemur_collaris.k141_601111                           N 0 I 1
s Eulemur_coronatus.k141_384460                               7596 36 -    112731 a-gg-cc---t-tg--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac-aa
i Eulemur_coronatus.k141_384460                          N 0 I 1
s Eulemur_flavifrons.k141_433119                              6606 36 -     68309 a-gg-cc---t-tg--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac-aa
i Eulemur_flavifrons.k141_433119                         N 0 I 1
s Eulemur_fulvus.k141_2627385                                 3742 36 -      9374 a-gg-cc---t-tg--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac-aa
i Eulemur_fulvus.k141_2627385                            N 0 I 1
s Eulemur_macaco.k141_1562045                                32837 36 +     75513 a-gg-cc---t-tg--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac-aa
i Eulemur_macaco.k141_1562045                            N 0 I 1
s Eulemur_mongoz.k141_232305                                 30721 36 +     97555 a-gg-cc---t-tg--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac-aa
i Eulemur_mongoz.k141_232305                             N 0 I 1
s Eulemur_rubriventer.k141_1423786                            7377 36 -     30972 a-gg-cc---t-tg--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------tcac-aa
i Eulemur_rubriventer.k141_1423786                       N 0 I 1
s Eulemur_rufus.k141_1120150                                  7254 36 +     16616 a-gg-cc---t-tg--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac-aa
i Eulemur_rufus.k141_1120150                             N 0 I 1
s Eulemur_sanfordi.k141_1122526                              33839 36 +    111500 a-gg-cc---t-tg--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac-aa
i Eulemur_sanfordi.k141_1122526                          N 0 I 1
s Felis_catus.CM001381.2                                  20267490 37 + 206538554 a-gg-tc---tcta--------------tagc----agg----------a-agaagc-a-------------aa-gaaact------------ata-aa
i Felis_catus.CM001381.2                                 N 0 I 1
s Felis_catus_fca126.CM031415.1                           20226268 37 + 205367284 a-gg-tc---tcta--------------tagc----agg----------a-agaagc-a-------------aa-gaaact------------ata-aa
i Felis_catus_fca126.CM031415.1                          N 0 I 1
s Felis_nigripes.FelNig_flattened_line_44075                  3278 37 -     25330 A-GG-TC---TCTA--------------TAGC----AGG----------A-AGAAGC-A-------------AA-GAAACT-AT--A----------AA
i Felis_nigripes.FelNig_flattened_line_44075             N 0 I 1
s Galago_moholi.ctg3793                                        683 37 +    137831 A-GG-CC---T-TA--------------CATC----TGG----------ACAAAAAG-G-------------AA--AGAGA-AT--A--------C-CG
i Galago_moholi.ctg3793                                  N 0 I 1
s Galago_senegalensis.k141_991736                             1799 37 -     22493 A-GG-CC---T-TA--------------CATC----TGG----------ACAAAAAG-G-------------AA--AGAGA-AT--A--------C-TG
i Galago_senegalensis.k141_991736                        N 0 I 1
s Galagoides_demidoff.k141_1153324                           11702 37 +     12379 A-GA-CC---T-TA--------------CATC----TGG----------ACAAAAAG-G-------------AA--AGCAA-AT--A--------C-AG
i Galagoides_demidoff.k141_1153324                       n 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_75343               15736 35 -     17176 a-gg-cc---t-ta--------------tatc----tgg----------g-aaaaag-g-------------aa--agatt------------ata-ag
i Galeopterus_variegatus.GalVar_scaffold_75343           N 0 I 1
s Giraffa_tippelskirchi.LVKQ01S007888.1                     636774 36 -    660261 a-gc-cc---t-ta--------------tcct----ggg----------a-agaagc-a-------------aa-gtgaat------------aca-ag
i Giraffa_tippelskirchi.LVKQ01S007888.1                  N 0 I 1
s Glis_glis.GliGli_scaffold_149316                            4942 36 +      8016 A-GT-CC---T-TA--------------CATC----TGG----------G-AAAATG-G-------------AA-GAGA---AT--A-----TA---AG
i Glis_glis.GliGli_scaffold_149316                       N 0 I 1
s Gorilla_beringei.k141_179627                                 828 33 +      1068 a-gg-cc---t-ta--------------tacc----tgg----------g-aaaaag-g-------------aa--agaca---------------aag
i Gorilla_beringei.k141_179627                           N 0 C 0
s Gorilla_gorilla.CYUI03001204.1                             39677 33 -     63219 a-gg-cc---t-ta--------------tacc----tgg----------g-aaaaag-g-------------aa--agaca---------------aag
i Gorilla_gorilla.CYUI03001204.1                         N 0 I 60
s Graphiurus_murinus.GraMur_scaffold_10447                   54693 36 +     78134 a-gt-cc---t-ta--------------cata----tgg----------g-aaaatg-g-------------aa-gaga------------atata-ag
i Graphiurus_murinus.GraMur_scaffold_10447               N 0 I 1
s Hapalemur_alaotrensis.k141_330369                           7251 36 +     40692 a-gg-cc---t-tg--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac-aa
i Hapalemur_alaotrensis.k141_330369                      N 0 I 1
s Hapalemur_gilberti.k141_435261                             16939 36 +     22537 a-gg-cc---t-tg--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac-aa
i Hapalemur_gilberti.k141_435261                         N 0 I 1
s Hapalemur_griseus.k141_679418                              15586 36 -     28566 a-gg-cc---t-tg--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac-aa
i Hapalemur_griseus.k141_679418                          N 0 I 1
s Hapalemur_meridionalis.k141_258450                         14318 36 +     42923 a-gg-cc---t-tg--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac-aa
i Hapalemur_meridionalis.k141_258450                     N 0 I 1
s Hapalemur_occidentalis.k141_578367                         17573 36 +     53142 a-gg-cc---t-tg--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac-aa
i Hapalemur_occidentalis.k141_578367                     N 0 I 1
s Helogale_parvula.HelPar_flattened_line_2585               272740 37 +    327341 A-GG-TC---CCTA--------------GAGC----AAG----------A-AGAAGC-A-------------AA-GAAACT---GTA----------AA
i Helogale_parvula.HelPar_flattened_line_2585            N 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14467 36 -     48891 a-gc-cc---t-ta--------------tcct----ggg----------a-agaagc-a-------------ac-gcaaat------------aca-ag
i Hemitragus_hylocrius.HemHyl_scaffold_35685             N 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10176 29 -     15841 -------------------------------GGGCTGGG----------A-AAAAGC-C-------------AG-GTGACC---CCA----------GG
i Heterohyrax_brucei.HetBruBak_scaffold_90013            N 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6360 36 +     36432 a-gc-tc---t-ca--------------tatt----ggg----------a-agaaac-a-------------aa-gagaat------------ata-ag
i Hippopotamus_amphibius.HipAmp_scaffold_38803           N 0 I 1
s Hipposideros_armiger.JXIK01000431.1                       132202 14 +   1711038 a-gt-gt---c-ca--------------ccca----ga-------------------------------------------------------------
i Hipposideros_armiger.JXIK01000431.1                    N 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_65612                9115 14 -     20285 A-GT-GT---C-CA--------------CCCA----GA-------------------------------------------------------------
i Hipposideros_galeritus.HipGal_scaffold_65612           N 0 C 0
s Hoolock_leuconedys.ctg274                                    460359 33 +    630532 a-ga-cc---t-tc--------------tatc----tgg----------g-aaaaag-g-------------aa--agaca---------------aag
i Hoolock_leuconedys.ctg274                                 N 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   8421 37 -     22022 C-GG-TC---TGTA--------------TAGC----GCA----------A-AGAAGC-A-------------AA-GAAGCT---GTA----------AA
i Hyaena_hyaena.HyaHya_flattened_line_62789              N 0 I 1
s Hylobates_agilis.k141_967383                                1628 33 -      4846 A-GA-CC---T-TC--------------TATC----TGG----------G-AAAAAG-G-------------AA--AGACA---------------AAG
i Hylobates_agilis.k141_967383                           N 0 C 0
s Hylobates_klossii.k141_483676                                 86 33 -      8919 A-GA-CC---T-TC--------------TATC----TGG----------G-AAAAAG-G-------------AA--AGACA---------------AAG
i Hylobates_klossii.k141_483676                          N 0 C 0
s Hylobates_pileatus_b.LG02                                     189555057 33 - 191637585 a-ga-cc---t-tc--------------tgtc----tgg----------g-aaaaag-g-------------aa--agaca---------------aag
i Hylobates_pileatus_b.LG02                                     N 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3347944 33 -  11177569 a-ga-cc---t-tc--------------tgtc----tgg----------g-aaaaag-g-------------aa--agaca---------------aag
i Hylobates_pileatus_a.tarseq_633                          N 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543680 36 -   7955117 A-GT-CT---T-TA--------------TAcc----tag----------g-aaaaag-g-------------aaa-aga-----ctatG--------AG
i Ictidomys_tridecemlineatus.JH393364.1                  N 0 I 1
s Indri_indri.k141_1997670                                    2078 36 +      8453 a-gg-cc---t-ca--------------tatc----tgg----------g-aaaaag-g-------------aa--agaga-----------ccat-ga
i Indri_indri.k141_1997670                               N 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_34779               29082 36 -     31341 a-gg-cc---t-ta--------------cact----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Inia_geoffrensis.IniGeo_flattened_line_34779           N 0 I 1
s Jaculus_jaculus.JH725527.1                               8298546 36 -   9596543 A-GT-TC---T-TA--------------TATc----tag----------g-ggaaag-g-------------ga-gaga------------atgta-aA
i Jaculus_jaculus.JH725527.1                             N 0 I 1
s Kogia_breviceps.KogBre_flattened_line_3970                  4833 36 +     97402 a-gc-cc---t-ta--------------tact----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Kogia_breviceps.KogBre_flattened_line_3970             N 0 I 1
s Lagothrix_lagothricha.k141_1005387                         33026 33 -     38430 a-gg-cc---t-ta--------------tgcc----tgg----------g-aagatg-g-------------aa--ggaca---------------aag
i Lagothrix_lagothricha.k141_1005387                     N 0 I 1
s Lemur_catta.scaffold_24                                 15544241 35 -  30322482 a-gg-cc---t-tg--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac--a
i Lemur_catta.scaffold_24                                N 0 I 1
s Lepilemur_ankaranensis.k141_2922                            8623 36 -     24677 a-gt-cc---t-ta--------------catc----tgg----------g-gaaaag-g-------------aa--agaga-----------tcat-aa
i Lepilemur_ankaranensis.k141_2922                       N 0 I 1
s Lepilemur_dorsalis.k141_387009                              4592 36 -     31569 a-gt-cc---t-ta--------------catc----tgg----------g-aaaaag-g-------------aa--agaga-----------tcat-aa
i Lepilemur_dorsalis.k141_387009                         N 0 I 1
s Lepilemur_ruficaudatus.k141_121139                         22654 36 +     25010 a-gt-cc---t-ta--------------catc----tgg----------g-aaaaag-g-------------aa--agaga-----------tcac-aa
i Lepilemur_ruficaudatus.k141_121139                     N 0 I 1
s Lepilemur_septentrionalis.k141_185316                      48208 36 +     54090 a-gt-cc---t-ta--------------catc----tgg----------g-aaaaag-g-------------aa--agaga-----------tcat-aa
i Lepilemur_septentrionalis.k141_185316                  N 0 I 1
s Leptonychotes_weddellii.KB714746.1                       3074335 36 +   3914936 --gg-tc---ttta--------------tagc----agg----------a-agaagt-g-------------aa-gagact------------aca-gg
i Leptonychotes_weddellii.KB714746.1                     N 0 I 1
s Lepus_americanus.LepAme_scaffold_57262                     12393 36 -     23961 a-ag-ct---t-tg--------------tatc----tgg----------a-gaaaagta-------------aa-gagaat-------------aa-ag
i Lepus_americanus.LepAme_scaffold_57262                 N 0 I 1
s Lipotes_vexillifer.KE559953.1                             298999 36 -    662738 a-gc-cc---t-ta--------------cact----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Lipotes_vexillifer.KE559953.1                          N 0 I 1
s Lophocebus_aterrimus.ctg367                              1464591 30 +   1826925 a-gg-cc---t-tg--------------tacg----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Lophocebus_aterrimus.ctg367                            N 0 C 0
s Loris_lydekkerianus.k141_2958567                            3689 37 -     22734 A-GG-CC---T-TA--------------CATC----TGG----------ACAAAAAG-G-------------AA--AGAGA-AT--A--------C-AG
i Loris_lydekkerianus.k141_2958567                       N 0 I 1
s Loris_tardigradus.ctg83                                  1061117 37 +   6120653 A-GG-CC---T-TA--------------CATC----TGG----------ACAAAAAG-G-------------AA--AGAGA-AT--A--------C-AG
i Loris_tardigradus.ctg83                                n 43557 I 1
s Lycaon_pictus.CM007581.1                                17987976 37 -  59628241 a-gg-tc---ttta--------------tagc----agg----------a-agaagc-a-------------aa-gagact------------ata-gg
i Lycaon_pictus.CM007581.1                               N 0 I 1
s Macaca_arctoides.k141_2326796                              32847 30 +     40492 a-gg-cc---t-tg--------------tacc----tgg----------c-aaaaag-g-------------aa--agac------------------g
i Macaca_arctoides.k141_2326796                          N 0 C 0
s Macaca_assamensis.Contig5                               59702772 30 +  60120075 a-gg-cc---t-tg--------------tacc----tgg----------c-aaaaag-g-------------aa--agac------------------g
i Macaca_assamensis.Contig5                              N 0 C 0
s Macaca_cyclopis.k119_794849                                 6966 30 +      8714 a-gg-cc---t-tg--------------tacc----tgg----------c-aaaaag-g-------------aa--agac------------------g
i Macaca_cyclopis.k119_794849                            N 0 C 0
s Macaca_fascicularis.k141_814140                           107400 30 -    114318 a-gg-cc---t-tg--------------tacc----tgg----------c-aaaaag-g-------------aa--agac------------------g
i Macaca_fascicularis.k141_814140                        N 0 C 0
s Macaca_fuscata.k119_943731                                  7211 30 +     13165 a-gg-cc---t-tg--------------tacc----tgg----------c-aaaaag-g-------------aa--agac------------------g
i Macaca_fuscata.k119_943731                             N 0 C 0
s Macaca_leonina.k141_2438370                                12585 30 -     14632 a-gg-cc---t-tg--------------tacc----tgg----------c-aaaaag-g-------------aa--agac------------------g
i Macaca_leonina.k141_2438370                            N 0 C 0
s Macaca_maura.k141_515834                                   12742 30 +     14712 a-gg-cc---t-tg--------------tacc----tgg----------c-aaaaag-g-------------aa--agac------------------g
i Macaca_maura.k141_515834                               N 0 C 0
s Macaca_mulatta.NC_041758.1                             186866781 30 + 187317192 A-GG-CC---T-TG--------------TACC----TGG----------C-AAAAAG-G-------------AA--AGAC------------------G
i Macaca_mulatta.NC_041758.1                             N 0 C 0
s Macaca_nemestrina.KQ007038.1                            25491896 30 -  25927173 A-GG-CC---T-TG--------------TACC----TGG----------C-AAAAAG-G-------------AA--AGAC------------------G
i Macaca_nemestrina.KQ007038.1                           N 0 C 0
s Macaca_nigra.k141_128247                                   20212 30 +     98240 a-gg-cc---t-tg--------------tacc----tgg----------c-aaaaag-g-------------aa--agac------------------g
i Macaca_nigra.k141_128247                               N 0 C 0
s Macaca_radiata.k141_3254723                                 5754 30 +     10028 a-gg-cc---t-tg--------------tacc----tgg----------c-aaaaag-g-------------aa--agac------------------g
i Macaca_radiata.k141_3254723                            N 0 C 0
s Macaca_siberu.k141_1929020                                  7006 30 -      9047 a-gg-cc---t-tg--------------tacc----tgg----------c-aaaaag-g-------------aa--agac------------------g
i Macaca_siberu.k141_1929020                             N 0 C 0
s Macaca_silenus.Contig273                                  358016 30 -    668171 a-gg-cc---t-tg--------------tacc----tgg----------c-aaaaag-g-------------aa--agat------------------g
i Macaca_silenus.Contig273                               N 0 C 0
s Macaca_thibetana.k99_596453                                 1387 30 -      5469 a-gg-cc---t-tg--------------tacc----tgg----------c-aaaaag-g-------------aa--agac------------------g
i Macaca_thibetana.k99_596453                            N 0 C 0
s Macaca_tonkeana.k141_683787                                 7225 30 +      9199 a-gg-cc---t-tg--------------tacc----tgg----------c-aaaaag-g-------------aa--agac------------------g
i Macaca_tonkeana.k141_683787                            N 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                 24110 13 +    270270 --gt-gc---g-ca--------------caaa----ga-------------------------------------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_4024             N 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961667 30 -  24302211 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--acac------------------g
i Mandrillus_leucophaeus.scaffold280                     N 0 C 0
s Mandrillus_sphinx.Contig270                               377420 30 +    752769 a-gg-cc---t-tg--------------cacc----tgg----------g-aagaag-g-------------aa--agac------------------g
i Mandrillus_sphinx.Contig270                            N 0 C 0
s Manis_javanica.JSZB01003497.1                              40067 35 +    737560 -------------------------------------gg----------g-aaaagc-agagactgttgagaga-gaaagt------------aaa-a-
i Manis_javanica.JSZB01003497.1                          N 0 I 1
s Manis_pentadactyla.KN006162.1                              72238 35 -    317179 -------------------------------------gg----------g-aaaagc-agagactgtcgagaga-gaaatt------------aaa-a-
i Manis_pentadactyla.KN006162.1                          N 0 I 1
s Marmota_marmota.CZRN01000018.1                          33124747 36 -  40650429 A-GT-CT---T-TA--------------TAcc----tag----------g-aaaaag-g-------------aaa-aga---ctaT--G--------AG
i Marmota_marmota.CZRN01000018.1                         N 0 I 1
s Megaderma_lyra.MegLyr_scaffold_4542                        36001 14 -    207569 a-at-gc---c-cA--------------CCCA----GA-------------------------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_4542                    N 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23153 37 +     74585 a-gg-tc---ttta--------------tagc----aag----------a-agaagc-a-------------aa-gagact------------aca-gg
i Mellivora_capensis.MelCap_flattened_line_19308         N 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_7390                 65938 36 +    140813 A-GT-TC---T-CC--------------TATC----TGG----------A-GAAAAG-G-------------AA-CAGA---AT--A-----TA---AG
i Meriones_unguiculatus.MerUng_scaffold_7390             N 0 I 1
s Mesocricetus_auratus.KB708134.1                         12212239 36 -  29670104 A-GT-TC---T-CA--------------TTGC----TGG----------G-CAAAAG-A-------------AA-GAGA---CT--A---CA-----AG
i Mesocricetus_auratus.KB708134.1                        n 2212 I 1
s Mesoplodon_bidens.MesBid_scaffold_74495                     4808 36 -     19186 a-gc-cc---t-ta--------------cact----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Mesoplodon_bidens.MesBid_scaffold_74495                N 0 I 1
s Microcebus_murinus.CM007674.1                           18313207 35 -  93316391 A-GT-CC---T-GA--------------TATC----TGG----------G-CAAA-G-G-------------AA--AGAGA---CCA-----T----GA
i Microcebus_murinus.CM007674.1                          N 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_39861                18888  7 -     30105 a-CT-AC---C-C--------------------------------------------------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_39861            N 0 I 3
s Miopithecus_ogouensis.k141_791330                           1538 30 -     13566 a-gg-cc---t-tg--------------tacc----tgg----------g-agaaag-g-------------aa--agac------------------g
i Miopithecus_ogouensis.k141_791330                      N 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        24774 37 +     26817 a-gg-tc---ttta--------------tagc----agg----------a-agaagt-g-------------aa-gagact------------aca-gg
i Mirounga_angustirostris.MirAng_flattened_line_55178    N 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_103                    56736 36 -    437263 a-gc-cc---t-ta--------------cact----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Monodon_monoceros.MonMon_M_scaffold_103                N 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_1417                 162092 14 -    366855 a-cc-gc---c-ca--------------gcca----ga-------------------------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_1417              N 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  31926 36 +     82753 a-gc-cc---t-ta--------------tcct----ggg----------a-agaagc-a-------------aa-gcggat------------gca-ag
i Moschus_moschiferus.MosMos_scaffold_13123              N 0 I 1
s Mungos_mungo.MunMun_flattened_line_18455                   21320 37 +     63510 A-GG-TC---CCTA--------------GAGC----AGG----------A-AGAAGC-A-------------AA-GAAACT---GTA----------AA
i Mungos_mungo.MunMun_flattened_line_18455               N 0 I 1
s Mus_pahari.LT608297.1                                   31390713 37 -  89631738 A-GT-TC---T-CC--------------AATC----TGG----------G-GAAAGG-A-------------AA-TACA--CAT--AA---A-----AA
i Mus_pahari.LT608297.1                                  N 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_74954             15241 45 -     17106 A-GT-CC---T-TA--------------CATC----CAG----------G-AAAATG-G-------------AA-GCGA---ATGTAAGGGATATA-AG
i Muscardinus_avellanarius.MusAve_scaffold_74954         N 0 I 1
s Mustela_putorius.JH418006.1                               330365 37 -  14710649 a-gg-tc---ttta--------------tagc----aag----------a-agaagc-a-------------aa-gagact------------aca-gg
i Mustela_putorius.JH418006.1                            N 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14120 36 -     28317 a-gt-ct---t-tg--------------tgcc----agg----------a-agaagc-a-------------aa-gccagt------------ata-ag
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          N 0 C 0
s Nasalis_larvatus.k141_970469                               18397 30 +     37058 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------ac--aggc------------------g
i Nasalis_larvatus.k141_970469                           N 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343309 37 +  31847680 a-gg-tc---ttta--------------tagc----agg----------a-agaagt-g-------------aa-gagact------------aca-gg
i Neomonachus_schauinslandi.NINY01007730.1               N 0 I 1
s Neophocaena_asiaeorientalis.KZ687982.1                   5894788 36 +   7148211 a-gc-cc---t-ta--------------cact----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Neophocaena_asiaeorientalis.KZ687982.1                 N 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000658.1               9181866 37 -   9404916 a-gg-tc---ttta--------------tagc----agg----------a-agaagc-a-------------aa-gagact------------ata-gg
i Nyctereutes_procyonoides.CAJHUB010000658.1             N 0 I 1
s Nycticebus_bengalensis.LG01                            102653264 37 - 196305487 A-GA-CC---T-TA--------------CATC----TGG----------ACAAAAAG-G-------------AA--AGAGA-AT--A--------C-AG
i Nycticebus_bengalensis.LG01                            N 0 I 1
s Nycticebus_coucang.k141_921975                              9406 37 +     15238 A-GA-CC---T-TA--------------CATC----TGG----------ACAAAAAG-G-------------AA--AGAGA-AT--A--------C-AG
i Nycticebus_coucang.k141_921975                         N 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827754 37 + 199412804 A-GA-CC---T-TA--------------CATC----TGG----------ACAAAAAG-G-------------AA--AGAGA-AT--A--------C-AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       N 0 I 7
s Odobenus_rosmarus.KB229312.1                              533877 37 -   2017862 a-gg-tc---ttta--------------tagc----agg----------a-agaagt-g-------------aa-gagact------------aca-gg
i Odobenus_rosmarus.KB229312.1                           N 0 I 1
s Odocoileus_virginianus.KZ100018.1                         168586 36 +    630418 a-gc-cc---t-ta--------------ccct----gag----------a-agaagc-a-------------aa-gtaaat------------aca-ag
i Odocoileus_virginianus.KZ100018.1                      N 0 I 1
s Okapia_johnstoni.LVCL01S0005463.1                         107467 36 -    150152 a-gc-cc---t-tg--------------tcct----ggg----------a-agaagc-a-------------aa-gcaaat------------aca-ag
i Okapia_johnstoni.LVCL01S0005463.1                      N 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_7387                    25086 36 +    140218 A-GT-TT---T-CC--------------TATC----TGG----------G-GAAAAG-G-------------AA-GAGA---AT--A-----TA---AG
i Ondatra_zibethicus.OndZib_scaffold_7387                N 0 I 1
s Onychomys_torridus.OnyTor_scaffold_28377                   12247 36 +     41509 A-GT-TC---T-CC--------------CATC----TGG----------G-GCAAAG-G-------------AA-GAGA---AT--A---CA-----AG
i Onychomys_torridus.OnyTor_scaffold_28377               n 2185 I 1
s Orcinus_orca.KB316932.1                                  2812014 36 -  10937097 a-gc-cc---t-ta--------------cact----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Orcinus_orca.KB316932.1                                N 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_327065               1637 49 -      4812 a-gg--c---t-taggacatgccacttctttc----agg----------a-agaagc-a-------------aa-g---tg---------aatata-ag
i Orycteropus_afer.OryAfe_flattened_line_327065          N 0 I 1
s Oryctolagus_cuniculus.CM000791.1                        67189988 36 + 174332312 a-ag-ct---t-tg--------------TATC----TGG----------G-GAAAAGTA-------------AA-GAGAAT-A---A----------AG
i Oryctolagus_cuniculus.CM000791.1                       N 0 I 1
s Otocyon_megalotis.JAEUCK010005147.1                       494933 37 -    559221 a-gg-tc---ttta--------------tagc----agg----------a-agaagc-a-------------aa-gagact------------ata-gg
i Otocyon_megalotis.JAEUCK010005147.1                    N 0 I 1
s Otolemur_crassicaudatus.k141_187572                         4336 37 -      5557 A-GG-CC---T-TA--------------CATC----TGG----------ACAAAAAG-G-------------AA--AGAGA-AT--A--------C-AG
i Otolemur_crassicaudatus.k141_187572                    N 0 I 1
s Otolemur_garnettii.GL873799.1                             737989 37 -   1103335 A-GG-CC---T-TA--------------CATC----Tgg----------acaaaaag-g-------------aa--agaga-----------atac-aG
i Otolemur_garnettii.GL873799.1                          N 0 I 1
s Ovis_aries.CM001607.2                                   17617400 36 +  44047080 a-gc-cc---t-ta--------------tcct----ggg----------a-agaagc-a-------------ac-gcaaat------------aca-ag
i Ovis_aries.CM001607.2                                  N 0 I 1
s Ovis_canadensis.OviCan_scaffold_75879                       1401 36 -     13921 a-gc-cc---t-ta--------------tcct----ggg----------a-agaagc-a-------------ac-gcaaat------------aca-ag
i Ovis_canadensis.OviCan_scaffold_75879                  N 0 I 1
s Pan_paniscus.KQ411608.1                                     3251 33 +     15831 A-GG-CC---T-TA--------------TAcc----tgg----------g-aaaaag-g-------------aa--agaca---------------aag
i Pan_paniscus.KQ411608.1                                N 0 C 0
s Pan_troglodytes.CM009242.2                             187649065 33 + 189151597 A-GG-CC---T-TA--------------TACc----tgg----------g-aaaaag-g-------------aa--agaca---------------aag
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  181139 37 +    230217 a-gg-tc---tcta--------------tagc----agg----------a-agaagc-a-------------aa-gaaact------------ata-aa
i Panthera_onca.PanOnc_flattened_line_3271               N 0 I 1
s Panthera_pardus.KV860321.1                                295936 37 +  18783137 a-gg-tc---tcta--------------tagc----agg----------a-agaagc-a-------------aa-gaaact------------ata-aa
i Panthera_pardus.KV860321.1                             N 0 I 1
s Panthera_tigris.KE722367.1                               4751282 37 -   8748460 a-gg-tc---tcta--------------tagc----agg----------a-agaagc-a-------------aa-gaaact------------ata-aa
i Panthera_tigris.KE722367.1                             N 0 I 1
s Pantholops_hodgsonii.KE114653.1                          1296318 36 -   2937107 a-gc-cc---t-ta--------------tcct----ggg----------a-agaagc-a-------------ac-gcaaat------------aca-ag
i Pantholops_hodgsonii.KE114653.1                        N 0 I 1
s Papio_anubis.CM001495.2                                183469840 30 + 183742232 A-GG-CC---T-TG--------------TACC----TGG----------G-AAAAAG-G-------------AA--AGAC------------------G
i Papio_anubis.CM001495.2                                N 0 C 0
s Papio_cynocephalus.k141_703094                              6178 30 -     17637 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agat------------------g
i Papio_cynocephalus.k141_703094                         N 0 C 0
s Papio_hamadryas.Contig39                                20592337 30 +  20919399 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Papio_hamadryas.Contig39                               N 0 C 0
s Papio_kindae.k141_1936966                                  31602 30 +     41871 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Papio_kindae.k141_1936966                              N 0 C 0
s Papio_papio.k141_2087334                                    7185 30 -     13745 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Papio_papio.k141_2087334                               N 0 C 0
s Papio_ursinus.k141_4818248                                 14685 30 +     25215 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agat------------------g
i Papio_ursinus.k141_4818248                             N 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42070 37 -     78924 a-ga-tc---tcca--------------tagt----agg----------a-agaagc-a-------------aa-gaaact------------ata-aa
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 N 0 I 1
s Perodicticus_ibeanus.k141_1387561                          11619 37 +     15382 A-GG-CC---T-TA--------------CATC----TGG----------ACAAAAAG-G-------------AA--AGAGA-AT--A--------C-TG
i Perodicticus_ibeanus.k141_1387561                      N 0 I 1
s Perodicticus_potto.k141_842195                             18169 37 -     21729 A-GG-CC---T-TA--------------CATC----TGG----------ACAAAAAG-G-------------AA--AGAGA-AT--A--------C-TG
i Perodicticus_potto.k141_842195                         N 0 I 1
s Perognathus_longimembris.PerPac_flattened_line_39705       13425 17 +     28765 A-GT-CC---T-CA--------------TATT----TGG----------G-A-----------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_39705   N 0 I 8
s Peromyscus_maniculatus.KI615324.1                       18244815 36 -  18517816 A-GT-TC---T-CC--------------TAtc----tgg----------g-gaaaag-g-------------aa-gaga------------atata-AG
i Peromyscus_maniculatus.KI615324.1                      n 2204 I 1
s Phocoena_phocoena.PhoPho_flattened_line_24159              38717 36 +     63832 a-gc-cc---t-ta--------------cact----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Phocoena_phocoena.PhoPho_flattened_line_24159          N 0 I 1
s Piliocolobus_badius.k141_2704958                           28638 29 -     55023 a-gg--c---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Piliocolobus_badius.k141_2704958                       N 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64056 29 +     89929 a-gg--c---t-tg--------------tgcc----tgg----------g-aaaaag-g-------------aa--agat------------------g
i Piliocolobus_gordonorum.k141_381342                    N 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14147 29 -     40849 a-gg--c---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Piliocolobus_kirkii.k141_1310104                       N 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326624 29 -  14605196 A-GG--C---T-TG--------------TACC----TGG----------G-AAAAAG-G-------------AA--AGAC------------------G
i Piliocolobus_tephrosceles.PDMG02000141.1               N 0 C 0
s Pithecia_albicans.k141_1476471                             19434 33 +     26961 a-gc-cc---t-ta--------------cacc----tgg----------g-aaagtg-g-------------aa--agaca---------------aag
i Pithecia_albicans.k141_1476471                         N 0 I 1
s Pithecia_chrysocephala.k141_839575                         15447 33 +     23417 a-gc-cc---t-ta--------------cacc----tgg----------g-aaagtg-g-------------aa--agaca---------------aag
i Pithecia_chrysocephala.k141_839575                     N 0 I 1
s Pithecia_hirsuta.k141_305604                               19428 33 +     29694 a-gc-cc---t-ta--------------cacc----tgg----------g-aaagtg-g-------------aa--agaca---------------aag
i Pithecia_hirsuta.k141_305604                           N 0 I 1
s Pithecia_mittermeieri.k141_446740                          44463 33 +     52772 a-gc-cc---t-ta--------------cacc----tgg----------g-aaagtg-g-------------aa--agaca---------------aag
i Pithecia_mittermeieri.k141_446740                      N 0 I 1
s Pithecia_pissinattii.k141_1824269                          19454 33 +     26198 a-gc-cc---t-ta--------------cacc----tgg----------g-aaagtg-g-------------aa--agaca---------------aag
i Pithecia_pissinattii.k141_1824269                      N 0 I 1
s Pithecia_pithecia.tarseq_165                             3955789 33 +   4542175 a-gc-cc---t-ta--------------cacc----tgg----------g-aaagtg-g-------------aa--agaca---------------aag
i Pithecia_pithecia.tarseq_165                           N 0 I 1
s Pithecia_vanzolinii.k141_1697688                           19381 33 -     23490 a-gc-cc---t-ta--------------cacc----tgg----------g-aaagtg-g-------------aa--agaca---------------aag
i Pithecia_vanzolinii.k141_1697688                       N 0 I 1
s Platanista_gangetica.PlaMin_flattened_line_175331           4885 36 -      7527 a-gc-cc---t-ta--------------cact----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Platanista_gangetica.PlaMin_flattened_line_175331      N 0 I 1
s Plecturocebus_bernhardi.k141_2549090                       22156 33 -     39866 A-GG-CC---T-CA--------------CACC----CGG----------G-AAGATG-G-------------AA--AGACA---------------AAG
i Plecturocebus_bernhardi.k141_2549090                   N 0 I 1
s Plecturocebus_brunneus.k141_1495506                        31314 33 +     34906 A-GG-CC---T-CA--------------CACC----CGG----------G-AAGATG-G-------------AA--AGACA---------------AAG
i Plecturocebus_brunneus.k141_1495506                    N 0 I 1
s Plecturocebus_caligatus.k141_1382851                       35577 33 +     87950 A-GG-CC---T-CA--------------CACC----CGG----------G-AAGATG-G-------------AA--AGACA---------------AAG
i Plecturocebus_caligatus.k141_1382851                   N 0 I 1
s Plecturocebus_cinerascens.k141_1164729                     36376 33 +     88961 A-GG-CC---T-CA--------------CACC----CGG----------G-AAGATG-G-------------AA--AGACA---------------AAG
i Plecturocebus_cinerascens.k141_1164729                 N 0 I 1
s Plecturocebus_cupreus.k141_2351393                         22069 33 +     39403 A-GG-CC---T-CA--------------CACC----CGG----------G-AAGATG-G-------------AA--AGACA---------------AAG
i Plecturocebus_cupreus.k141_2351393                     N 0 I 1
s Plecturocebus_dubius.k141_1058799                          35845 33 -     87928 A-GG-CC---T-CA--------------CACC----CGG----------G-AAGATG-G-------------AA--AGACA---------------AAG
i Plecturocebus_dubius.k141_1058799                      N 0 I 1
s Plecturocebus_grovesi.k141_2013005                         42826 33 +     60166 A-GG-CC---T-CA--------------CACC----CGG----------G-AAGATG-G-------------AA--AGACA---------------AAG
i Plecturocebus_grovesi.k141_2013005                     N 0 I 1
s Plecturocebus_hoffmannsi.k141_3303950                      43019 33 +     67232 A-GG-CC---T-CA--------------CACC----CGG----------G-AAGATG-G-------------AA--AGACA---------------AAG
i Plecturocebus_hoffmannsi.k141_3303950                  N 0 I 1
s Plecturocebus_miltoni.k141_349282                          38484 33 +     90634 A-GG-CC---T-TA--------------CACC----CGG----------G-AAGATG-G-------------AA--AGACA---------------AAG
i Plecturocebus_miltoni.k141_349282                      N 0 I 1
s Plecturocebus_moloch.k141_1031110                          35867 33 -     89403 A-GG-CC---T-CA--------------CACC----CGG----------G-AAGATG-G-------------AA--AGACA---------------AAG
i Plecturocebus_moloch.k141_1031110                      N 0 I 1
s Pongo_abelii.CM009266.2                                189181789 33 + 189387572 A-GG-CC---T-TA--------------TACc----tgg----------g-aaaaag-g-------------aa--agaca---------------aag
i Pongo_abelii.CM009266.2                                N 0 C 0
s Pongo_pygmaeus.ctg66                                     9596683 33 +   9816681 a-gg-cc---t-ta--------------tacc----tgg----------g-aaaaag-g-------------aa--agaca---------------aag
i Pongo_pygmaeus.ctg66                                   N 0 C 0
s Presbytis_comata.k141_1230337                              18222 30 -     69807 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Presbytis_comata.k141_1230337                          N 0 C 0
s Presbytis_mitrata.k141_584736                              11584 30 +     80239 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Presbytis_mitrata.k141_584736                          N 0 C 0
s Procavia_capensis.ProCapCap_scaffold_112514                11493 29 +     16234 -------------------------------GGGCTGGG----------A-AAAAGC-C-------------AG-GTGACC---CCA----------GG
i Procavia_capensis.ProCapCap_scaffold_112514            N 0 I 1
s Prolemur_simus.MPIZ01000396.1                            2616873 36 -   4620579 A-GG-CC---T-TG--------------TATC----TGG----------G-ACAAAG-G-------------AA--AGAGA-CCG----------C-AA
i Prolemur_simus.MPIZ01000396.1                          N 0 I 1
s Propithecus_coquerelli.NW_012148875.1                    1012929 36 +   2598838 A-GG-CC---T-TA--------------TAtc----tgg----------g-aaaaag-g-------------aa--agaga---ccA--------C-TA
i Propithecus_coquerelli.NW_012148875.1                  N 0 I 1
s Propithecus_coronatus.k141_114130                           8997 36 -     19127 a-gg-cc---t-ta--------------tatc----tgg----------g-aaaaag-g-------------aa--agaga-----------ccac-ta
i Propithecus_coronatus.k141_114130                      N 0 I 1
s Propithecus_diadema.k141_599139                            10091 36 +     10533 a-gg-cc---t-ta--------------tatc----tgg----------g-aaaaag-g-------------aa--agaga-----------ccac-ta
i Propithecus_diadema.k141_599139                        N 0 I 1
s Propithecus_edwardsi.k141_635656                             333 36 +     30655 a-gg-cc---t-ta--------------tatc----tgg----------g-aaaaag-g-------------aa--agaga-----------ccac-ta
i Propithecus_edwardsi.k141_635656                       N 0 I 1
s Propithecus_perrieri.k141_217725                            2525 36 +     14082 a-gg-cc---t-ta--------------tatc----tgg----------g-aaaaag-g-------------aa--agaga-----------ccac-ta
i Propithecus_perrieri.k141_217725                       N 0 I 1
s Propithecus_tattersalli.k141_790011                        50210 36 -     67325 a-gg-cc---t-ta--------------tatc----tgg----------g-aaaaag-g-------------aa--agaga-----------ccac-ta
i Propithecus_tattersalli.k141_790011                    N 0 I 1
s Propithecus_verreauxi.k141_1047036                          7003 36 -     35169 a-gg-cc---t-ta--------------tatc----tgg----------g-aaaaag-g-------------aa--agaga-----------ccac-ta
i Propithecus_verreauxi.k141_1047036                     N 0 I 1
s Psammomys_obesus.NESX01036367.1                            19204 36 -     31435 A-GT-TC---T-CC--------------TATC----TGG----------A-GAAAAG-G-------------AA-CAGA---AT--A-----TA---AG
i Psammomys_obesus.NESX01036367.1                        N 0 I 1
s Pteronotus_parnellii.KE854991.1                             1649 14 -     11709 a-ct-gt---c-ca--------------gcca----ga-------------------------------------------------------------
i Pteronotus_parnellii.KE854991.1                        N 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14061 37 +     25061 a-gg-cc---ttta--------------tagc----aag----------a-agaagc-a-------------aa-gagact------------aca-gg
i Pteronura_brasiliensis.PteBra_flattened_line_42152     N 0 I 1
s Pteropus_alecto.KB030862.1                              23005954 13 +  28871421 --gt-gc---t-ca--------------ccca----ga-------------------------------------------------------------
i Pteropus_alecto.KB030862.1                             N 0 C 0
s Pteropus_vampyrus.KN525825.1                             1390040 13 +   4952924 --at-gc---c-ca--------------ccca----ga-------------------------------------------------------------
i Pteropus_vampyrus.KN525825.1                           N 0 C 0
s Puma_concolor.QAVW01001104.1                            20305738 37 -  38429054 a-gg-tc---tcta--------------tagc----agg----------a-agaagc-a-------------aa-gaaact------------ata-aa
i Puma_concolor.QAVW01001104.1                           N 0 I 1
s Pygathrix_cinerea.k141_1153803                             40292 30 -     91421 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Pygathrix_cinerea.k141_1153803                         N 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7634472 30 +   7812017 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Pygathrix_nigripes_b.ctg100                               N 0 C 0
s Pygathrix_nigripes_a.k141_215492                             40334 30 -     72585 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Pygathrix_nigripes_a.k141_215492                         N 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31058 36 +     55207 a-gc-cc---t-ta--------------ccct----tag----------a-agaagc-a-------------aa-gtaaat------------aca-ag
i Rangifer_tarandus.RanTarSib_scaffold_29737             N 0 I 1
s Rattus_norvegicus.chr16                                 53605974 37 +  90668790 A-AT-TC---T-CC--------------TATC----TGG----------g-gaaaaa-g-------------aa-taca-----------aatata-aa
i Rattus_norvegicus.chr16                                N 0 I 1
s Rhinolophus_sinicus.LVEH01000134.1                        389318 14 -   3329780 a-gc-gt---c-cA--------------CCCA----GA-------------------------------------------------------------
i Rhinolophus_sinicus.LVEH01000134.1                     N 0 C 0
s Rhinopithecus_bieti.k119_188731                            15540 30 -     21983 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------a
i Rhinopithecus_bieti.k119_188731                        N 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91261909 30 - 195417433 A-GG-CC---T-TG--------------TACc----tgg----------g-aaaaag-g-------------aa--agac------------------a
i Rhinopithecus_roxellana.NC_044550.1                    N 0 C 0
s Rhinopithecus_strykeri.ctg102                            7701000 30 +   7961872 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------a
i Rhinopithecus_strykeri.ctg102                          N 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17411 13 +    116970 --at-gc---c-ca--------------ccca----ga-------------------------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             N 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1121 36 -      3450 a-gc-cc---t-ta--------------tcct----ggg----------a-agaagc-a-------------at-gcgaat------------aca-ag
i Saiga_tatarica.SaiTat_scaffold_455678                  N 0 I 1
s Saimiri_boliviensis.NW_024100920.1                     119968291 33 - 121099817 A-GG-CC---T-TA--------------CACC----TGG----------G-AAGATG-G-------------AA--GGACG---------------AAG
i Saimiri_boliviensis.NW_024100920.1                     N 0 I 1
s Saimiri_cassiquiarensis.k141_2188234                       40583 33 +     46362 A-GG-CC---T-TA--------------CACC----TGG----------G-AAGATG-G-------------AA--GGACG---------------AAG
i Saimiri_cassiquiarensis.k141_2188234                   N 0 I 1
s Saimiri_macrodon.k141_716185                               40643 33 +     45824 A-GG-CC---T-TA--------------CACC----TGG----------G-AAGATG-G-------------AA--GGACG---------------AAG
i Saimiri_macrodon.k141_716185                           N 0 I 1
s Saimiri_oerstedii.k141_1487881                             57311 33 -     64574 A-GG-CC---T-TA--------------TACC----TGG----------G-AAGATG-G-------------AA--GGACG---------------AAG
i Saimiri_oerstedii.k141_1487881                         N 0 I 1
s Saimiri_sciureus.k141_2278166                              20405 33 -     23631 A-GG-CC---T-TA--------------CACC----TGG----------G-AAGATG-G-------------AA--GGACG---------------AAG
i Saimiri_sciureus.k141_2278166                          N 0 I 1
s Saimiri_ustus.k141_1484609                                 40569 33 -     61129 A-GG-CC---T-TA--------------CACC----TGG----------G-AAGATG-G-------------AA--GGACG---------------AAG
i Saimiri_ustus.k141_1484609                             N 0 I 1
s Sapajus_apella.ctg103                                    5441767 33 -   5703754 A-GG-CC---T-TA--------------CACC----TGC----------G-AAGAGG-G-------------AA--GGACA---------------AAG
i Sapajus_apella.ctg103                                  N 0 I 1
s Sapajus_macrocephalus.k141_351809                          72852 33 -     80660 A-GG-CC---T-TA--------------CACC----TGC----------G-AAGAGG-G-------------AA--GGACA---------------AAG
i Sapajus_macrocephalus.k141_351809                      N 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_662                    176885 36 -    313613 a-ga-cc---t-ta--------------aaag----ggg----------a-aggagc-a-------------ga-gagaat------------gtt-aa
i Scalopus_aquaticus.ScaAqu_scaffold_662                 N 0 I 1
s Semnopithecus_entellus.k141_1705875                         5540 30 +     17286 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Semnopithecus_entellus.k141_1705875                    N 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                       5665 30 -     58920 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Semnopithecus_hypoleucos.k141_1910531                  N 0 C 0
s Semnopithecus_johnii.k141_843753                            5573 30 +     45317 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Semnopithecus_johnii.k141_843753                       N 0 C 0
s Semnopithecus_priam.k141_960425                             5686 30 +      9426 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Semnopithecus_priam.k141_960425                        N 0 C 0
s Semnopithecus_schistaceus.k141_972136                       5579 30 +     24620 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Semnopithecus_schistaceus.k141_972136                  N 0 C 0
s Semnopithecus_vetulus.k141_654052                           1509 30 -      5251 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Semnopithecus_vetulus.k141_654052                      N 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                     4295 26 -     77746 ------------------------------AC----TGA----------G-GAAAAG-G-------------AA-GAGA---AT--A-----TA---AG
i Sigmodon_hispidus.SigHis_scaffold_20193                n 2179 I 1
s Solenodon_paradoxus.SolPar_flattened_line_126              22982 36 +   1910179 A-AA-CC---T-TA--------------TACT----GGG----------A-AGACCC-A-------------AG-GAGATT-AT-T-----------AG
i Solenodon_paradoxus.SolPar_flattened_line_126          N 0 I 1
s Sorex_araneus.JH798187.1                                13682124 33 -  18376816 A-AG-CC---T-CA--------------TGct----gag----------a-agaaac-a-------------aa-gaaat---------------t-aa
i Sorex_araneus.JH798187.1                               N 0 I 1
s Spermophilus_dauricus.KZ294078.1                         1975929 36 -   3870691 A-GT-CT---T-TA--------------TAcc----tag----------g-aaaaag-g-------------aaa-aga-----ctatG--------AG
i Spermophilus_dauricus.KZ294078.1                       N 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_13525             58842 37 +     97271 a-gg-tc---ttaa--------------tagc----aag----------a-agaagc-a-------------aa-gagact------------aca-ga
i Spilogale_gracilis.SpiGra_flattened_line_13525         N 0 I 1
s Suricata_suricatta.SurSur_flattened_line_6629              47822 37 -    196729 a-gg-tc---ccta--------------gagc----agg----------a-agaagc-a-------------aa-ggaact------------gta-aa
i Suricata_suricatta.SurSur_flattened_line_6629          N 0 I 1
s Sus_scrofa.CM000828.4                                   63022591 36 -  69701581 a-gg-cc---t-ta--------------tact----ggg----------a-agaagc-a-------------aa-gaaaat------------ata-ag
i Sus_scrofa.CM000828.4                                  N 0 I 1
s Symphalangus_syndactylus.tarseq_199                      1105077 33 -   1523678 a-ga-cc---t-tc--------------tatc----tgg----------g-aaaaag-g-------------aa--agaca---------------aag
i Symphalangus_syndactylus.tarseq_199                    N 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                31516 14 +     41958 a-CT-GC---C-CA--------------CCCA----GA-------------------------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_25820            N 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93634 36 +    116680 a-gt-ct---t-tg--------------tgtc----agg----------a-ataagc-a-------------aa-gccagc------------gta-cg
i Tamandua_tetradactyla.TamTet_scaffold_1782             N 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138450 36 -    156842 a-gg-cc---t-t---a-----------tacc----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Tapirus_indicus.TapInd_scaffold_9301                   N 0 I 1
s Tapirus_terrestris.TapTer_scaffold_755                    406922 36 +    539355 a-gg-cc---t-t---a-----------tacc----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Tapirus_terrestris.TapTer_scaffold_755                 N 0 I 1
s Tarsius_lariang.k141_2201908                               50346 37 +     70052 g-gg-cc---t-ta--------------catc----agg----------g-caaaag-g-------------aa--agaga-----------atataag
i Tarsius_lariang.k141_2201908                           N 0 I 1
s Tarsius_wallacei.k141_722827                               14738 37 +     18080 G-GG-CC---T-TA--------------CATC----AGG----------G-CAAAAG-G-------------AA--AGAGA-AT--A-----T---AAG
i Tarsius_wallacei.k141_722827                           N 0 I 1
s Theropithecus_gelada.CM009954.1                        186466055 30 + 186847797 A-GG-CC---T-TG--------------TACC----TGG----------G-AAAAAG-G-------------AA--AGAC------------------G
i Theropithecus_gelada.CM009954.1                        N 0 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    103721  7 +    610378 a-ct-cc---c-C--------------------------------------------------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_294                 N 0 I 3
s Trachypithecus_auratus.k141_95322                          12055 30 -     15799 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Trachypithecus_auratus.k141_95322                      N 0 C 0
s Trachypithecus_crepusculus.k141_539312                     25422 30 +     78344 a-gg-cc---t-tg--------------tacc----tgg----------t-aaaaag-g-------------aa--agat------------------g
i Trachypithecus_crepusculus.k141_539312                 N 0 C 0
s Trachypithecus_cristatus.k141_581431                       12226 30 -     15970 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Trachypithecus_cristatus.k141_581431                   N 0 C 0
s Trachypithecus_francoisi.k141_1453105                      11188 30 +     62838 a-gg-cc---t-tg--------------tacc----tgg----------t-aaaaag-g-------------aa--agat------------------g
i Trachypithecus_francoisi.k141_1453105                  N 0 C 0
s Trachypithecus_geei.k141_119873                            12153 30 -     17556 a-gg-cc---t-tg--------------tacc----tgg----------t-aaaaag-g-------------aa--agat------------------g
i Trachypithecus_geei.k141_119873                        N 0 C 0
s Trachypithecus_germaini.k141_545543                        12167 30 -     15912 a-gg-cc---t-tg--------------tatc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Trachypithecus_germaini.k141_545543                    N 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      11117 30 +     64340 a-gg-cc---t-tg--------------tacc----tgg----------t-aaaaag-g-------------aa--agat------------------g
i Trachypithecus_hatinhensis.k141_31479                  N 0 C 0
s Trachypithecus_laotum.k141_928651                          12116 30 +     63452 a-gg-cc---t-tg--------------tacc----tgg----------t-aaaaag-g-------------aa--agat------------------g
i Trachypithecus_laotum.k141_928651                      N 0 C 0
s Trachypithecus_leucocephalus.k141_283481                   11191 30 +     21341 a-gg-cc---t-tg--------------tacc----tgg----------t-aaaaag-g-------------aa--agat------------------g
i Trachypithecus_leucocephalus.k141_283481               N 0 C 0
s Trachypithecus_melamera.k141_261742                         1253 30 +     11697 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Trachypithecus_melamera.k141_261742                    N 0 C 0
s Trachypithecus_obscurus.k141_170351                        13034 30 +     33539 a-gg-cc---t-tg--------------tacc----tgg----------g-aaaaag-g-------------aa--agac------------------g
i Trachypithecus_obscurus.k141_170351                    N 0 C 0
s Trachypithecus_phayrei.ctg124                            5964862 30 +   6242583 a-gg-cc---t-tg--------------tacc----tgg----------t-aaaaag-g-------------aa--agat------------------g
i Trachypithecus_phayrei.ctg124                          N 0 C 0
s Trachypithecus_pileatus.k141_583962                        12950 30 +     14028 a-gg-cc---t-tg--------------tacc----tgg----------t-aaaaag-g-------------aa--agat------------------g
i Trachypithecus_pileatus.k141_583962                    N 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                     4752 35 +    200418 a-gc-cc---t-ta--------------tact----ggg----------a-agacgt-g-------------aa-gagaat------------aca--g
i Tragulus_javanicus.TraJav_scaffold_3462                N 0 I 1
s Trichechus_manatus.JH594705.1                            4313567 29 +  10818551 -------------------------------CTGCTGGG----------A-AGAAGC-A-------------AG-GCGAAC-AT--A----------AG
i Trichechus_manatus.JH594705.1                          N 0 I 1
s Tursiops_truncatus.MRVK01000835.1                       15765427 36 +  33153633 a-gc-cc---t-ta--------------cact----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Tursiops_truncatus.MRVK01000835.1                      N 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_46687                     715 38 +     21056 a-ga-acaaaa-ta--------------aaat----aat----------a-ataaaa-a-------------aa-gaaaaa-------------ga-aa
i Uropsilus_gracilis.UroGra_scaffold_46687               N 0 I 17
s Ursus_maritimus.KK499267.1                               4878157 37 -   5085361 a-gg-tc---tgta--------------tagc----agg----------a-agaagc-a-------------aa-gagact------------ata-gg
i Ursus_maritimus.KK499267.1                             N 0 I 1
s Varecia_rubra.k141_590885                                  31563 36 +     50397 a-gg-cc---t-ta--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac-aa
i Varecia_rubra.k141_590885                              N 0 I 1
s Varecia_variegata.k141_1100575                              6652 36 +     25465 a-gg-cc---t-ta--------------tatc----tgg----------g-acaaag-g-------------aa--agaga-----------ccac-aa
i Varecia_variegata.k141_1100575                         N 0 I 1
s Vicugna_pacos.KN270157.1                                 5389937 36 -   5488506 a-gg-cc---t-ca--------------tact----ggg----------a-agaagc-a-------------aa-gagaac------------ata-ca
i Vicugna_pacos.KN270157.1                               n 21064 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 42686 37 -     43706 a-gg-tc---ttta--------------tagc----agg----------a-agaagc-a-------------aa-gagact------------ata-gg
i Vulpes_lagopus.VulLag_flattened_line_30954             N 0 I 1
s Xerus_inauris.XerIna_scaffold_2302                         24570 36 +    224448 A-GT-CC---T-TA--------------TATT----TGG----------G-GAAAAG-G-------------AA-AAGA---AT--A-------CC-AG
i Xerus_inauris.XerIna_scaffold_2302                     N 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_17732         29751 37 +     86975 a-gg-cc---ttta--------------tagc----agg----------a-agaagt-g-------------aa-gagact------------aca-gg
i Zalophus_californianus.ZalCal_flattened_line_17732     N 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_11398                      38714 36 +     63895 A-GT-CC---T-TG--------------TACC----TGA----------G-GAAAAG-G-------------AA-GAGA---ATGTA----------AG
i Zapus_hudsonius.ZapHud_scaffold_11398                  N 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21574 36 -     22999 a-gc-cc---t-ta--------------caat----ggg----------a-agaagc-a-------------aa-gagaat------------ata-ag
i Ziphius_cavirostris.ZipCav_flattened_line_16896        N 0 I 1
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11094 16 +     36723 GG-GTGGA-A-GG-A--AA----AGC
s Acinonyx_jubatus.LLWD01001279.1                           836374 16 +   1699592 ga-t-ggaag-ga-a--ga-ca-t--
i Acinonyx_jubatus.LLWD01001279.1                        I 1 I 2
s Acomys_cahirinus.AcoCah_scaffold_21377                     10638 15 -     63021 TA-T-GGA-G-AG-A--AA----GCT
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 1 I 3
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538305 16 -  29979442 ga-t-agaag-ga-a--ga-ca-g--
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 1 I 2
s Ailurus_fulgens.LNAC01001112.1                            107756 16 -    347723 aa-c-agaag-ga-a--ga-ca-g--
i Ailurus_fulgens.LNAC01001112.1                         I 1 I 2
s Allactaga_bullata.AllBul_scaffold_20030                     1318 15 +     61208 GA-T-GGA-A-GT-A--AA----GCC
i Allactaga_bullata.AllBul_scaffold_20030                I 1 I 3
s Allenopithecus_nigroviridis.k141_3361533                   40655 15 -     52922 ag-t-gga-a-gg-a--aa----agc
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          6977 15 +     11307 ag-t-gga-a-gg-a--aa----agc
i Allochrocebus_lhoesti.k141_1932296                     C 0 C 0
s Allochrocebus_preussi.k141_499905                           7149 15 -     13300 ag-t-gga-a-gg-a--aa----agc
i Allochrocebus_preussi.k141_499905                      C 0 C 0
s Allochrocebus_solatus.k141_139760                           9030 15 +     12926 ag-t-gga-a-gg-a--aa----agc
i Allochrocebus_solatus.k141_139760                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             31694 15 +     51355 ag-t-gga-a-gg-a--aa----acc
i Alouatta_belzebul.k141_3560514                         I 1 C 0
s Alouatta_caraya.k141_1701091                               24840 15 -     36483 ag-t-gga-a-gc-a--aa----acc
i Alouatta_caraya.k141_1701091                           I 1 C 0
s Alouatta_discolor.k141_1945310                              6945 15 -     13496 ag-t-gga-a-gg-a--aa----acc
i Alouatta_discolor.k141_1945310                         I 1 C 0
s Alouatta_juara.k141_1302312                                23727 15 +     27940 AG-T-GGA-A-GG-A--AA----ACC
i Alouatta_juara.k141_1302312                            I 1 C 0
s Alouatta_macconnelli.k141_623179                           15535 15 -     39310 AG-T-GGA-A-GG-A--AA----ACC
i Alouatta_macconnelli.k141_623179                       I 1 C 0
s Alouatta_nigerrima.k141_1929159                            23793 15 +     30492 ag-t-gga-a-gg-a--aa----acc
i Alouatta_nigerrima.k141_1929159                        I 1 C 0
s Alouatta_palliata.k141_2135620                             28024 15 +     47717 ag-t-gga-a-gg-a--aa----acc
i Alouatta_palliata.k141_2135620                         I 1 C 0
s Alouatta_puruensis.k141_2029433                            78996 15 +     87306 ag-t-gga-a-gg-a--aa----acc
i Alouatta_puruensis.k141_2029433                        I 1 C 0
s Alouatta_seniculus.k141_117119                             38978 15 +     50774 AG-T-GGA-A-GG-A--AA----ACC
i Alouatta_seniculus.k141_117119                         I 1 C 0
s Ammotragus_lervia.NIVO01071767.1                          707721  9 -   2318259 ga-t-gaa-g-ga-------------
i Ammotragus_lervia.NIVO01071767.1                       I 1 I 4
s Antilocapra_americana.AntAmePen_scaffold_43303             26947 15 -     32520 ga-t-gaa-g-ga-agtaa----g--
i Antilocapra_americana.AntAmePen_scaffold_43303         I 1 I 2
s Aotus_azarae.k141_2596348                                   5226 15 +     12024 ag-t-aga-a-gg-a--aa----acc
i Aotus_azarae.k141_2596348                              I 1 C 0
s Aotus_griseimembra.k141_2227177                             4892 15 -     10972 ag-t-aga-a-gg-a--aa----acc
i Aotus_griseimembra.k141_2227177                        I 1 C 0
s Aotus_nancymaae.KZ198451.1                               4333353 15 -   5030052 AG-T-AGA-A-GG-A--AA----ACC
i Aotus_nancymaae.KZ198451.1                             I 1 C 0
s Aotus_trivirgatus.k141_1801223                              5285 15 -     12698 ag-t-aga-a-gg-a--aa----acc
i Aotus_trivirgatus.k141_1801223                         I 1 C 0
s Aotus_vociferans.k141_506037                                4745 15 -     11998 ag-t-aga-a-gg-a--aa----acc
i Aotus_vociferans.k141_506037                           I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22160 14 +     39421 ga-t-aga-g-gg-a--aa----gt-
i Aplodontia_rufa.AprRuf_scaffold_37633                  I 1 C 0
s Arctocebus_calabarensis.k141_1364444                       14234 15 +     45910 GG-C-AAA-A-GG-A--AA----GCC
i Arctocebus_calabarensis.k141_1364444                   I 1 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21231989 15 -  21539123 ag-t-gga-a-gg-a--aa----acc
i Ateles_geoffroyi_b.tarseq_1536                            I 1 C 0
s Ateles_belzebuth.k141_1572163                               3061 15 -     48076 ag-t-gga-a-gg-a--aa----acc
i Ateles_belzebuth.k141_1572163                          I 1 C 0
s Ateles_chamek.k141_2083276                                 18527 15 -     22344 ag-t-gga-a-gg-a--aa----acc
i Ateles_chamek.k141_2083276                             I 1 C 0
s Ateles_geoffroyi_a.k141_833924                               31583 15 -     89868 ag-t-gga-a-gg-a--aa----acc
i Ateles_geoffroyi_a.k141_833924                           I 1 C 0
s Ateles_marginatus.k141_803263                              35996 15 -     40414 ag-t-gga-a-gg-a--aa----acc
i Ateles_marginatus.k141_803263                          I 1 C 0
s Ateles_paniscus.k141_457735                                43830 15 +     72325 ag-t-gga-a-gg-a--aa----acc
i Ateles_paniscus.k141_457735                            I 1 C 0
s Avahi_laniger.k141_765380                                  75584 16 -     92717 ggat-gaa-a-gg-a--aa----agc
i Avahi_laniger.k141_765380                              I 1 C 0
s Avahi_peyrierasi.k141_1424874                              76167 16 +     85213 ggat-gaa-a-gg-a--aa----agc
i Avahi_peyrierasi.k141_1424874                          I 1 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222376 15 +  23207421 ga-t-gaa-g-ga-agtaa----a--
i Balaenoptera_acutorostrata.KI537508.1                  I 1 I 2
s Balaenoptera_bonaerensis.DF411050.1                         4379 15 +     25979 ga-t-gaa-g-ga-agtaa----a--
i Balaenoptera_bonaerensis.DF411050.1                    I 1 I 2
s Beatragus_hunteri.BeaHun_scaffold_7278                     12775  9 -    124022 ga-t-gaa-g-ga-------------
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 1 I 8
s Bison_bison.KN261452.1                                    232953 15 -    288883 ga-t-gaa-g-ga-agtaa----g--
i Bison_bison.KN261452.1                                 I 1 I 2
s Bos_indicus.CM003047.1                                  20306328 15 +  48749331 ga-t-gaa-g-ga-agtaa----g--
i Bos_indicus.CM003047.1                                 I 1 I 2
s Bos_mutus.JH880303.1                                     1159430 15 -   1948126 ga-t-gaa-g-ga-agtaa----g--
i Bos_mutus.JH880303.1                                   I 1 I 2
s Bos_taurus.CM000203.6                                   18116540 15 +  45695690 ga-t-gaa-g-ga-agtaa----g--
i Bos_taurus.CM000203.6                                  I 1 I 2
s Bubalus_bubalis.KI419123.1                               2851379 15 +   4408762 ga-t-taa-g-ga-agtaa----g--
i Bubalus_bubalis.KI419123.1                             I 1 I 2
s Cacajao_ayresi.k141_552049                                116853 15 -    122966 AG-T-GGA-A-GG-A--AG----ACC
i Cacajao_ayresi.k141_552049                             I 1 C 0
s Cacajao_calvus.k141_5142                                   76331 15 +     81800 AG-T-GGA-A-GG-A--AG----ACC
i Cacajao_calvus.k141_5142                               I 1 C 0
s Cacajao_hosomi.k141_81245                                  45536 15 -     95584 AG-T-GGA-A-GG-A--AG----ACC
i Cacajao_hosomi.k141_81245                              I 1 C 0
s Cacajao_melanocephalus.k141_619699                         69631 15 -    119600 ag-t-gga-a-gg-a--ag----acc
i Cacajao_melanocephalus.k141_619699                     I 1 C 0
s Camelus_bactrianus.KN276810.1                           10020361 13 -  17673402 ga-t-gaa-g-ga-a--ga----c--
i Camelus_bactrianus.KN276810.1                          I 1 I 2
s Camelus_dromedarius.KN272107.1                           2353191 13 -   7040546 ga-t-gaa-g-ga-a--ga----c--
i Camelus_dromedarius.KN272107.1                         I 1 I 2
s Camelus_ferus.KB017975.1                                  421450 13 -   1652518 ga-t-gaa-g-ga-a--ga----c--
i Camelus_ferus.KB017975.1                               I 1 I 2
s CanFam4.chr16                                           17831647 16 -  60362399 ga-t-agaag-ga-a--ga-ca-g--
i CanFam4.chr16                                          I 1 I 2
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32391 16 -     43241 ga-t-agaag-ga-a--ga-ca-g--
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 1 I 2
s Canis_lupus_dingo.QKWQ01000480.1                         9067115 16 -   9314153 ga-t-agaag-ga-a--ga-ca-g--
i Canis_lupus_dingo.QKWQ01000480.1                       I 1 I 2
s Canis_lupus_familiaris.chr16                            17991774 16 -  59632846 ga-t-agaag-ga-a--ga-ca-g--
i Canis_lupus_familiaris.chr16                           I 1 I 2
s Canis_lupus_orion.HG994398.1                            18532880 16 +  63665305 ga-t-agaag-ga-a--ga-ca-g--
i Canis_lupus_orion.HG994398.1                           I 1 I 2
s Capra_aegagrus.CM003241.1                               18861784  9 +  46296322 GA-T-GAA-G-GA-------------
i Capra_aegagrus.CM003241.1                              I 1 I 4
s Capra_hircus.CM004588.1                                 18092502  9 -  44709034 GA-T-GAA-G-GA-------------
i Capra_hircus.CM004588.1                                I 1 I 4
s Carlito_syrichta.NW_007259797.1                           179807 15 -    496798 GA-T-AGA-G-GG-A--AA----ATC
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Castor_canadensis.CasCan_scaffold_2074                    167040 15 +    179628 CC-T-GGA-A-GA-C--CC----AGT
i Castor_canadensis.CasCan_scaffold_2074                 I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                    113324 13 +    217609 ga-t-gaa-a-ga-a--ga----c--
i Catagonus_wagneri.CatWag_scaffold_2839                 I 1 I 2
s Cebus_albifrons.Contig27                                25675475 15 +  26074798 ag-t-gga-a-gg-a--aa----acc
i Cebus_albifrons.Contig27                               I 1 C 0
s Cebus_olivaceus.k141_1764483                               21943 15 +     28840 ag-t-gga-a-gg-a--aa----acc
i Cebus_olivaceus.k141_1764483                           I 1 C 0
s Cebus_unicolor.k141_547207                                  7614 15 +     13997 ag-t-gga-a-gg-a--aa----acc
i Cebus_unicolor.k141_547207                             I 1 C 0
s Cephalopachus_bancanus.k141_1423433                        29732 15 +     31688 GA-T-AGA-G-GG-A--AA----ACC
i Cephalopachus_bancanus.k141_1423433                    I 1 C 0
s Ceratotherium_simum.JH767749.1                          12257154 16 +  27778364 ga-c-gaaag-ga-a--gact--g--
i Ceratotherium_simum.JH767749.1                         I 1 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          2861 16 +     15641 ga-c-gaaag-ga-a--gact--g--
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     I 1 I 2
s Cercocebus_atys.KQ010504.1                               4501629 15 +   4669795 AG-T-GGA-A-GG-A--AA----AGC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_2766003                       22901 15 -     30935 ag-t-gga-a-gg-a--aa----agc
i Cercocebus_chrysogaster.k141_2766003                   C 0 C 0
s Cercocebus_lunulatus.k141_245046                            7303 15 +     18174 ag-t-gga-a-gg-a--aa----agc
i Cercocebus_lunulatus.k141_245046                       C 0 C 0
s Cercocebus_torquatus.k141_4063387                           7140 15 +     18249 ag-t-gga-a-gg-a--aa----agc
i Cercocebus_torquatus.k141_4063387                      C 0 C 0
s Cercopithecus_ascanius.k141_4281816                         2259 15 -      5884 ag-t-gga-a-gg-a--aa----agc
i Cercopithecus_ascanius.k141_4281816                    C 0 C 0
s Cercopithecus_cephus.k141_1630443                           1283 15 +      4620 AG-C-GGA-A-GG-A--AA----AGC
i Cercopithecus_cephus.k141_1630443                      C 0 C 0
s Cercopithecus_diana.k141_488174                             7719 15 +     10982 AG-C-GGA-A-GG-A--AA----AGC
i Cercopithecus_diana.k141_488174                        C 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1265 15 +      4810 ag-t-gga-a-gg-a--aa----agc
i Cercopithecus_hamlyni.k141_1302205                     C 0 C 0
s Cercopithecus_lowei.k141_4082698                            7181 15 +     34178 ag-c-gga-a-gg-a--aa----agc
i Cercopithecus_lowei.k141_4082698                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38849291 15 +  39242232 ag-t-gga-a-gg-a--aa----agc
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21252891 15 -  21565898 ag-c-gga-a-gg-a--aa----agc
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_557928                         7347 15 -     18401 ag-c-gga-a-gg-a--aa----agc
i Cercopithecus_neglectus.k141_557928                    C 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7410 15 -     15013 AG-T-GGA-A-GG-A--AA----AGC
i Cercopithecus_nictitans.k141_1200139                   C 0 C 0
s Cercopithecus_petaurista.k141_365908                        7381 15 +     11214 AG-T-GGA-A-GG-A--AA----AGC
i Cercopithecus_petaurista.k141_365908                   C 0 C 0
s Cercopithecus_pogonias.k141_391400                          2201 15 -     13831 ag-c-gga-a-gg-a--aa----agc
i Cercopithecus_pogonias.k141_391400                     C 0 C 0
s Cercopithecus_roloway.k141_1248991                         27375 15 +     68532 ag-c-gga-a-gg-a--aa----agc
i Cercopithecus_roloway.k141_1248991                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             455  8 -      1897 ---------A-GG-A--AG----G-T
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       N 0 C 0
s Cheirogaleus_major.k141_333249                             43573 16 -     52598 ggat-gga-a-gg-a--aa----acc
i Cheirogaleus_major.k141_333249                         I 1 C 0
s Cheirogaleus_medius.k141_1055463                           38906 16 +     57038 gggt-gga-a-gg-a--aa----acc
i Cheirogaleus_medius.k141_1055463                       I 1 C 0
s Cheracebus_lucifer.k141_49986                               9752 15 -     17098 AG-T-GGA-A-GG-A--AA----ACC
i Cheracebus_lucifer.k141_49986                          I 1 C 0
s Cheracebus_lugens.k141_1393925                              9622 15 +     17877 AG-T-GGA-A-GG-A--AA----ACC
i Cheracebus_lugens.k141_1393925                         I 1 C 0
s Cheracebus_regulus.k141_471822                            167189 15 -    216457 ag-t-gga-a-gg-a--aa----acc
i Cheracebus_regulus.k141_471822                         I 1 C 0
s Cheracebus_torquatus.k141_1170026                          71662 15 +     76511 AG-T-GGA-A-GG-A--AA----ACC
i Cheracebus_torquatus.k141_1170026                      I 1 C 0
s Chiropotes_israelita.k141_747660                          113878 15 +    146308 ag-t-gga-a-gg-a--aa----acc
i Chiropotes_israelita.k141_747660                       I 1 C 0
s Chiropotes_sagulatus.k141_1421488                          45786 15 -     50570 AG-T-GGA-A-GG-A--AA----ACC
i Chiropotes_sagulatus.k141_1421488                      I 1 C 0
s Chlorocebus_aethiops.ctg25                              18455159 15 -  18827391 ag-t-gga-a-gg-a--aa----agc
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41102 15 -     50209 ag-t-gga-a-gg-a--aa----agc
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448084 15 + 135778131 AG-T-GGA-A-GG-A--AA----AGC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   653 14 -     25429 GA-G-AGA-A-GG-C--AG----G-C
i Choloepus_didactylus.ChoDid_scaffold_22546             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            195781 14 +    839153 ga-g-aca-a-gg-c--ag----g-c
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               6488 15 -      9651 aa-c-tga-a-ga-a--ag----gcc
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          I 4 C 0
s Colobus_angolensis.KN981557.1                            1936025 15 +   2368649 AG-C-GGA-A-GG-A--AA----AGC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199970003 15 + 200372422 ag-c-gga-a-gg-a--aa----agc
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              58317 15 +     84244 ag-c-gga-a-gg-a--aa----agc
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17566230 14 -  53390261 ga-g-gaa-agga-a--ga----c--
i Condylura_cristata.JH655891.1                          I 1 I 2
s Cricetomys_gambianus.CriGam_scaffold_14425                 16541 15 +     83289 TA-T-GAA-G-GG-A--AA----GCC
i Cricetomys_gambianus.CriGam_scaffold_14425             I 1 I 3
s Cricetulus_griseus.LT883664.1                           11697173 15 + 224834208 CA-T-GGA-G-GG-A--AA----ACC
i Cricetulus_griseus.LT883664.1                          I 1 I 3
s Crocidura_indochinensis.CroInd_scaffold_123729              8588  9 -      9007 ------GA-A-CC-A--AG----G--
i Crocidura_indochinensis.CroInd_scaffold_123729         C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59089 16 -     87169 ga-t-ggaag-ga-a--ga-ca-g--
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 I 2
s Dasypus_novemcinctus.JH564415.1                            92251 13 +   2246927 ga-g-agg-a-gg-a--ag----g--
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12562345 16 -  12879189 ggat-gga-a-gg-a--aa----acc
i Daubentonia_madagascariensis.ctg71                     I 1 C 0
s Delphinapterus_leucas.KZ290073.1                        16841527 15 +  35494412 ga-t-gaa-g-ga-agtaa----a--
i Delphinapterus_leucas.KZ290073.1                       I 1 I 2
s Dicerorhinus_sumatrensis.PEKH010002091.1                  698950 16 +   1390856 ga-c-gaaag-ga-a--gact--g--
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 1 I 2
s Diceros_bicornis.DicBicMic_scaffold_5955                   31752 16 +    198055 ga-c-aaaag-ga-a--gact--g--
i Diceros_bicornis.DicBicMic_scaffold_5955               I 1 I 2
s Dipodomys_ordii.KN672350.1                              18914578 15 +  37912305 GG-A-TGA-A-GG-A--AA----GCC
i Dipodomys_ordii.KN672350.1                             I 8 C 0
s Dipodomys_stephensi.DipSte_scaffold_47531                  13176 15 -     26976 GG-A-TGA-A-GG-A--AA----ACC
i Dipodomys_stephensi.DipSte_scaffold_47531              I 8 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       341954 15 +    607251 ga-g-gga-g-ga-aggaa----g--
i Elaphurus_davidianus.JRFZ01104969.1                    I 1 I 2
s Ellobius_lutescens.LOEQ01008920.1                          47569 15 -    110024 CA-T-GGA-G-GG-G--AA----ACT
i Ellobius_lutescens.LOEQ01008920.1                      I 1 I 3
s Ellobius_talpinus.LOJH01050844.1                            8822 15 +     12610 CA-T-GGA-G-GG-G--AA----ACC
i Ellobius_talpinus.LOJH01050844.1                       I 1 I 3
s Enhydra_lutris.KZ291758.1                               16365652 16 -  41312741 ga-c-agaag-ga-t--ga-ca-g--
i Enhydra_lutris.KZ291758.1                              I 1 I 2
s Equus_asinus.JREZ01000139.1                              1310258 16 +   4378816 ga-c-aaaag-ga-a--gact--g--
i Equus_asinus.JREZ01000139.1                            I 1 I 2
s Equus_caballus.CM000403.2                               18557726 16 -  39960074 ga-c-aaaag-ga-a--gact--g--
i Equus_caballus.CM000403.2                              I 1 I 2
s Equus_przewalskii.KK951119.1                               59767 16 +    498745 ga-c-aaaag-ga-a--gact--g--
i Equus_przewalskii.KK951119.1                           I 1 I 2
s Erinaceus_europaeus.JH835339.1                           3365120 13 -   7059049 ga-g-aaa-g-at-a--ga----c--
i Erinaceus_europaeus.JH835339.1                         I 238 I 123
s Erythrocebus_patas.Contig38                             21237365 15 -  21539334 ag-c-gga-a-gg-a--aa----agc
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           40709 15 +    133382 ga-t-gaa-g-ga-agtaa----a--
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 1 I 2
s Eubalaena_japonica.EubJap_flattened_line_57114              5002 15 -     25849 ga-t-gaa-g-ga-agtaa----a--
i Eubalaena_japonica.EubJap_flattened_line_57114         I 1 I 2
s Eulemur_albifrons.k141_1869827                             12692 16 -     21348 ggat-gga-a-gg-a--aa----agt
i Eulemur_albifrons.k141_1869827                         I 1 C 0
s Eulemur_collaris.k141_601111                                9894 16 +     70999 ggat-gga-a-gg-a--aa----agc
i Eulemur_collaris.k141_601111                           I 1 C 0
s Eulemur_coronatus.k141_384460                               7633 16 -    112731 ggat-gga-a-gg-a--aa----agt
i Eulemur_coronatus.k141_384460                          I 1 C 0
s Eulemur_flavifrons.k141_433119                              6643 16 -     68309 ggat-gga-a-gg-a--aa----agc
i Eulemur_flavifrons.k141_433119                         I 1 C 0
s Eulemur_fulvus.k141_2627385                                 3779 16 -      9374 ggat-gga-a-gg-a--aa----agc
i Eulemur_fulvus.k141_2627385                            I 1 C 0
s Eulemur_macaco.k141_1562045                                32874 16 +     75513 ggat-gga-a-gg-a--aa----agc
i Eulemur_macaco.k141_1562045                            I 1 C 0
s Eulemur_mongoz.k141_232305                                 30758 16 +     97555 ggat-gga-a-gg-a--aa----agc
i Eulemur_mongoz.k141_232305                             I 1 C 0
s Eulemur_rubriventer.k141_1423786                            7414 16 -     30972 ggat-gga-a-gg-a--aa----agc
i Eulemur_rubriventer.k141_1423786                       I 1 C 0
s Eulemur_rufus.k141_1120150                                  7291 16 +     16616 ggat-gga-a-gg-a--aa----agc
i Eulemur_rufus.k141_1120150                             I 1 C 0
s Eulemur_sanfordi.k141_1122526                              33876 16 +    111500 ggat-gga-a-gg-a--aa----agt
i Eulemur_sanfordi.k141_1122526                          I 1 C 0
s Felis_catus.CM001381.2                                  20267528 16 + 206538554 ga-t-ggaag-ga-a--ga-ca-t--
i Felis_catus.CM001381.2                                 I 1 I 2
s Felis_catus_fca126.CM031415.1                           20226306 16 + 205367284 ga-t-ggaag-ga-a--ga-ca-t--
i Felis_catus_fca126.CM031415.1                          I 1 I 2
s Felis_nigripes.FelNig_flattened_line_44075                  3316 16 -     25330 GA-T-GGAAG-GA-A--GA--CAT--
i Felis_nigripes.FelNig_flattened_line_44075             I 1 I 2
s Galago_moholi.ctg3793                                        721 15 +    137831 CG-C-AAA-A-GG-A--AA----GCC
i Galago_moholi.ctg3793                                  I 1 C 0
s Galago_senegalensis.k141_991736                             1837 15 -     22493 GG-C-AAA-A-GG-A--AA----GCC
i Galago_senegalensis.k141_991736                        I 1 C 0
s Galagoides_demidoff.k141_1153324                           11740 15 +     12379 GG-C-AAA-A-GG-A--AA----GCC
i Galagoides_demidoff.k141_1153324                       I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_75343               15772 15 -     17176 ga-t-caa-a-gg-a--aa----acc
i Galeopterus_variegatus.GalVar_scaffold_75343           I 1 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     636811 15 -    660261 ga-t-gaa-g-ga-aggaa----g--
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 1 I 2
s Glis_glis.GliGli_scaffold_149316                            4979 15 +      8016 AA-T-AGA-A-GG-T--AA----ACC
i Glis_glis.GliGli_scaffold_149316                       I 1 I 2
s Gorilla_beringei.k141_179627                                 861 16 +      1068 gg-gtgga-a-gg-a--aa----agc
i Gorilla_beringei.k141_179627                           C 0 C 0
s Gorilla_gorilla.LT578341.1                             186364975 16 + 186649187 gg-gTGGA-A-GG-A--AA----AGC
i Gorilla_gorilla.LT578341.1                             n 60 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   54730 15 +     78134 aa-t-aga-g-gg-t--aa----acc
i Graphiurus_murinus.GraMur_scaffold_10447               I 1 I 2
s Hapalemur_alaotrensis.k141_330369                           7288 16 +     40692 ggat-gaa-a-gg-a--aa----agc
i Hapalemur_alaotrensis.k141_330369                      I 1 C 0
s Hapalemur_gilberti.k141_435261                             16976 16 +     22537 ggat-gaa-a-gg-a--aa----agc
i Hapalemur_gilberti.k141_435261                         I 1 C 0
s Hapalemur_griseus.k141_679418                              15623 16 -     28566 ggat-gaa-a-gg-a--aa----agc
i Hapalemur_griseus.k141_679418                          I 1 C 0
s Hapalemur_meridionalis.k141_258450                         14355 16 +     42923 ggat-gaa-a-gg-a--aa----agc
i Hapalemur_meridionalis.k141_258450                     I 1 C 0
s Hapalemur_occidentalis.k141_578367                         17610 16 +     53142 ggat-gaa-a-gg-a--aa----agc
i Hapalemur_occidentalis.k141_578367                     I 1 C 0
s Helogale_parvula.HelPar_flattened_line_2585               272778 16 +    327341 GA-T-CGAAA-GA-A--GA--CAG--
i Helogale_parvula.HelPar_flattened_line_2585            I 1 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14504  9 -     48891 ga-t-gaa-g-ga-------------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 1 I 4
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10206 12 -     15841 GA-C-AGG-A-G--A--AA----G--
i Heterohyrax_brucei.HetBruBak_scaffold_90013            I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6397 15 +     36432 ga-t-gaa-g-ca-agtaa----a--
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 1 I 2
s Hoolock_leuconedys.ctg274                                    460392 15 +    630532 gg-g-gga-a-gg-a--aa----agc
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   8459 16 -     22022 GA-T-GGAAG-GA-A--GA--CAG--
i Hyaena_hyaena.HyaHya_flattened_line_62789              I 1 I 2
s Hylobates_agilis.k141_967383                                1661 15 -      4846 AG-G-GGA-A-GG-A--AA----AGC
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                119 15 -      8919 AG-G-GGA-A-GG-A--AA----AGC
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555090 15 - 191637585 ag-g-gga-a-gg-a--aa----agc
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3347977 15 -  11177569 ag-g-gga-a-gg-a--aa----agc
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543717 14 -   7955117 GA-C-AAA-G-GG-T--AA----AT-
i Ictidomys_tridecemlineatus.JH393364.1                  I 1 C 0
s Indri_indri.k141_1997670                                    2115 16 +      8453 ggat-gga-a-gg-a--aa----agc
i Indri_indri.k141_1997670                               I 1 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29119 15 -     31341 ga-t-gaa-g-ga-agtaa----a--
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 1 I 2
s Jaculus_jaculus.JH725527.1                               8298583 15 -   9596543 GA-T-GGA-A-GG-G--AA----GCC
i Jaculus_jaculus.JH725527.1                             I 1 I 3
s Kogia_breviceps.KogBre_flattened_line_3970                  4870 15 +     97402 ga-t-gaa-g-ga-agtaa----a--
i Kogia_breviceps.KogBre_flattened_line_3970             I 1 I 2
s Lagothrix_lagothricha.k141_1005387                         33060 15 -     38430 ag-t-gga-a-gg-a--aa----acc
i Lagothrix_lagothricha.k141_1005387                     I 1 C 0
s Lemur_catta.scaffold_24                                 15544277 16 -  30322482 ggat-gga-a-gg-a--aa----agc
i Lemur_catta.scaffold_24                                I 1 C 0
s Lepilemur_ankaranensis.k141_2922                            8660 16 -     24677 ggat-gga-a-gg-a--aa----acc
i Lepilemur_ankaranensis.k141_2922                       I 1 C 0
s Lepilemur_dorsalis.k141_387009                              4629 16 -     31569 ggat-gga-a-ag-a--aa----acc
i Lepilemur_dorsalis.k141_387009                         I 1 C 0
s Lepilemur_ruficaudatus.k141_121139                         22691 16 +     25010 ggat-gga-a-gg-a--aa----acc
i Lepilemur_ruficaudatus.k141_121139                     I 1 C 0
s Lepilemur_septentrionalis.k141_185316                      48245 16 +     54090 ggat-gga-a-gg-a--aa----acc
i Lepilemur_septentrionalis.k141_185316                  I 1 C 0
s Leptonychotes_weddellii.KB714746.1                       3074372 16 +   3914936 ga-t-agaag-ga-a--ga-ca-g--
i Leptonychotes_weddellii.KB714746.1                     I 1 I 2
s Lepus_americanus.LepAme_scaffold_57262                     12430 15 -     23961 aa-t-gga-a-tg-a--aa----acc
i Lepus_americanus.LepAme_scaffold_57262                 I 1 I 386
s Lipotes_vexillifer.KE559953.1                             299036 15 -    662738 ga-t-gaa-g-ga-agtaa----a--
i Lipotes_vexillifer.KE559953.1                          I 1 I 2
s Lophocebus_aterrimus.ctg367                              1464621 15 +   1826925 ag-t-gga-a-gg-a--aa----agc
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2958567                            3727 15 -     22734 AG-C-AAA-A-GG-A--AA----GGC
i Loris_lydekkerianus.k141_2958567                       I 1 C 0
s Loris_tardigradus.ctg83                                  1061155 15 +   6120653 AG-C-AAA-A-GG-A--AA----GGC
i Loris_tardigradus.ctg83                                I 1 C 0
s Lycaon_pictus.CM007581.1                                17988014 16 -  59628241 ga-t-agaag-ga-a--ga-ca-g--
i Lycaon_pictus.CM007581.1                               I 1 I 2
s Macaca_arctoides.k141_2326796                              32877 15 +     40492 ag-t-gga-a-gg-a--aa----agc
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59702802 15 +  60120075 ag-t-gga-a-gg-a--aa----agc
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_794849                                 6996 15 +      8714 ag-t-gga-a-gg-a--aa----agc
i Macaca_cyclopis.k119_794849                            C 0 C 0
s Macaca_fascicularis.k141_814140                           107430 15 -    114318 ag-t-gga-a-gg-a--aa----agc
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_943731                                  7241 15 +     13165 ag-t-gga-a-gg-a--aa----agc
i Macaca_fuscata.k119_943731                             C 0 C 0
s Macaca_leonina.k141_2438370                                12615 14 -     14632 ag-t-gga-a-gg-a--aa----a-c
i Macaca_leonina.k141_2438370                            C 0 C 0
s Macaca_maura.k141_515834                                   12772 15 +     14712 ag-t-gga-a-gg-a--aa----agc
i Macaca_maura.k141_515834                               C 0 C 0
s Macaca_mulatta.NC_041758.1                             186866811 15 + 187317192 AG-T-GGA-A-GG-A--AA----AGC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25491926 15 -  25927173 AG-T-GGA-A-GG-A--AA----AGC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_128247                                   20242 15 +     98240 ag-t-gga-a-gg-a--aa----agc
i Macaca_nigra.k141_128247                               C 0 C 0
s Macaca_radiata.k141_3254723                                 5784 15 +     10028 ag-t-gga-a-gg-a--aa----agc
i Macaca_radiata.k141_3254723                            C 0 C 0
s Macaca_siberu.k141_1929020                                  7036 15 -      9047 ag-t-gga-a-gg-a--aa----agc
i Macaca_siberu.k141_1929020                             C 0 C 0
s Macaca_silenus.Contig273                                  358046 14 -    668171 ag-t-gga-a-gg-a--aa----a-c
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_596453                                 1417 15 -      5469 ag-t-gga-a-gg-a--aa----agt
i Macaca_thibetana.k99_596453                            C 0 C 0
s Macaca_tonkeana.k141_683787                                 7255 15 +      9199 ag-t-gga-a-gg-a--aa----agc
i Macaca_tonkeana.k141_683787                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961697 15 -  24302211 ag-t-gga-a-gg-a--aa----agc
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               377450 15 +    752769 ag-t-gga-a-gg-a--aa----agc
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              40103 17 +    737560 ga-c-agaag-ta-a--gagca-c--
i Manis_javanica.JSZB01003497.1                          I 1 I 2
s Manis_pentadactyla.KN006162.1                              72274 17 -    317179 ga-c-agaag-ga-a--gagca-t--
i Manis_pentadactyla.KN006162.1                          I 1 I 2
s Marmota_marmota.CZRN01000018.1                          33124784 14 -  40650429 GA-C-AAA-G-GG-A--AA----AT-
i Marmota_marmota.CZRN01000018.1                         I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23191 16 +     74585 ga-c-agaag-aa-a--ga-ta-g--
i Mellivora_capensis.MelCap_flattened_line_19308         I 1 I 2
s Meriones_unguiculatus.MerUng_scaffold_7390                 65975 15 +    140813 TA-C-GGA-A-GG-A--AC----CCT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 1 I 3
s Mesocricetus_auratus.KB708134.1                         12212276 15 -  29670104 CA-T-GGA-G-GG-A--AA----ACC
i Mesocricetus_auratus.KB708134.1                        I 1 I 3
s Mesoplodon_bidens.MesBid_scaffold_74495                     4845 15 -     19186 ga-t-gaa-g-ga-agtaa----a--
i Mesoplodon_bidens.MesBid_scaffold_74495                I 1 I 2
s Microcebus_murinus.CM007674.1                           18313243 16 -  93316391 GGAT-GGA-A-GG-A--AA----ACC
i Microcebus_murinus.CM007674.1                          I 1 C 0
s Miopithecus_ogouensis.k141_791330                           1568 15 -     13566 ag-t-gga-a-gg-a--aa----agc
i Miopithecus_ogouensis.k141_791330                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        24812 16 +     26817 ga-t-agaag-ga-a--ga-ca-g--
i Mirounga_angustirostris.MirAng_flattened_line_55178    I 1 I 2
s Monodon_monoceros.MonMon_M_scaffold_103                    56773 15 -    437263 ga-t-gaa-g-ga-agtaa----a--
i Monodon_monoceros.MonMon_M_scaffold_103                I 1 I 2
s Moschus_moschiferus.MosMos_scaffold_13123                  31963 15 +     82753 ga-t-gaa-g-ga-aggaa----g--
i Moschus_moschiferus.MosMos_scaffold_13123              I 1 I 2
s Mungos_mungo.MunMun_flattened_line_18455                   21358 16 +     63510 GA-T-GGAAA-GA-A--GA--CAG--
i Mungos_mungo.MunMun_flattened_line_18455               I 1 I 2
s Mus_pahari.LT608297.1                                   31390751 15 -  89631738 CA-T-GGA-G-GG-G--AA----ACT
i Mus_pahari.LT608297.1                                  I 1 I 3
s Muscardinus_avellanarius.MusAve_scaffold_74954             15287 15 -     17106 AA-T-AGA-G-GG-G--AA----ACC
i Muscardinus_avellanarius.MusAve_scaffold_74954         I 1 I 2
s Mustela_putorius.JH418006.1                               330403 16 -  14710649 ga-c-agaag-ga-t--gag-a-g--
i Mustela_putorius.JH418006.1                            I 1 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14156 12 -     28317 gaac-aga-a-gg-a--a--------
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 C 0
s Nasalis_larvatus.k141_970469                               18427 15 +     37058 ag-t-ggg-a-gg-a--aa----agg
i Nasalis_larvatus.k141_970469                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343347 16 +  31847680 ga-t-agaag-ga-a--ga-ca-g--
i Neomonachus_schauinslandi.NINY01007730.1               I 1 I 2
s Neophocaena_asiaeorientalis.KZ687982.1                   5894825 15 +   7148211 ga-t-gaa-g-ga-agtaa----a--
i Neophocaena_asiaeorientalis.KZ687982.1                 I 1 I 2
s Nyctereutes_procyonoides.CAJHUB010000658.1               9181904 16 -   9404916 ca-t-agaag-ga-a--ga-ca-g--
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 1 I 2
s Nycticebus_bengalensis.LG01                            102653302 15 - 196305487 AG-C-AAA-A-GG-A--AA----GCC
i Nycticebus_bengalensis.LG01                            I 1 C 0
s Nycticebus_coucang.k141_921975                              9444 15 +     15238 AG-C-AAA-A-GG-A--AA----GCC
i Nycticebus_coucang.k141_921975                         I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827798  8 + 199412804 -----------GG-A--AA----GCC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 7 C 0
s Odobenus_rosmarus.KB229312.1                              533915 16 -   2017862 ga-g-agaag-ga-a--ga-ca-g--
i Odobenus_rosmarus.KB229312.1                           I 1 I 2
s Odocoileus_virginianus.KZ100018.1                         168623 15 +    630418 ga-g-gga-g-gg-aggaa----g--
i Odocoileus_virginianus.KZ100018.1                      I 1 I 2
s Okapia_johnstoni.LVCL01S0005463.1                         107504 15 -    150152 ga-g-gaa-g-ga-aggaa----g--
i Okapia_johnstoni.LVCL01S0005463.1                      I 1 I 2
s Ondatra_zibethicus.OndZib_scaffold_7387                    25123 15 +    140218 CA-T-GGA-G-GA-G--AA----ACA
i Ondatra_zibethicus.OndZib_scaffold_7387                I 1 I 3
s Onychomys_torridus.OnyTor_scaffold_28377                   12284 15 +     41509 TA-T-GGA-A-GG-A--AA----ATC
i Onychomys_torridus.OnyTor_scaffold_28377               I 1 I 3
s Orcinus_orca.KB316932.1                                  2812051 15 -  10937097 ga-t-gaa-g-ga-agtaa----a--
i Orcinus_orca.KB316932.1                                I 1 I 2
s Orycteropus_afer.OryAfe_flattened_line_327065               1687 15 -      4812 ga-c-tga-a-aa-a--ag----gtc
i Orycteropus_afer.OryAfe_flattened_line_327065          I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190025 15 + 174332312 GA-T-GGA-A-TG-A--AA----ACC
i Oryctolagus_cuniculus.CM000791.1                       I 1 I 393
s Otocyon_megalotis.JAEUCK010005147.1                       494971 16 -    559221 ga-t-agaag-ga-a--ga-ca-g--
i Otocyon_megalotis.JAEUCK010005147.1                    I 1 I 2
s Otolemur_crassicaudatus.k141_187572                         4374 15 -      5557 GG-C-AAA-A-GG-A--AT----GCC
i Otolemur_crassicaudatus.k141_187572                    I 1 C 0
s Otolemur_garnettii.GL873799.1                             738027 15 -   1103335 GG-C-AAA-A-GG-A--AC----GCC
i Otolemur_garnettii.GL873799.1                          I 1 C 0
s Ovis_aries.CM001607.2                                   17617437  9 +  44047080 ga-t-gaa-g-ga-------------
i Ovis_aries.CM001607.2                                  I 1 I 4
s Ovis_canadensis.OviCan_scaffold_75879                       1438  9 -     13921 ga-t-gaa-g-ga-------------
i Ovis_canadensis.OviCan_scaffold_75879                  I 1 I 4
s Pan_paniscus.KQ411608.1                                     3284 16 +     15831 gg-gtgga-a-gg-a--aa----agc
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649098 16 + 189151597 gg-gtgga-a-gg-a--aa----agc
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  181177 16 +    230217 ga-t-ggaag-ga-a--ga-ca-t--
i Panthera_onca.PanOnc_flattened_line_3271               I 1 I 2
s Panthera_pardus.KV860321.1                                295974 16 +  18783137 ga-t-ggaag-ga-a--ga-ca-t--
i Panthera_pardus.KV860321.1                             I 1 I 2
s Panthera_tigris.KE722367.1                               4751320 16 -   8748460 ga-t-ggaag-ga-a--ga-ca-t--
i Panthera_tigris.KE722367.1                             I 1 I 2
s Pantholops_hodgsonii.KE114653.1                          1296355  9 -   2937107 ga-t-gaa-g-ga-------------
i Pantholops_hodgsonii.KE114653.1                        I 1 I 4
s Papio_anubis.CM001495.2                                183469870 15 + 183742232 AG-T-GGA-A-GG-A--AA----AGC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_703094                              6208 15 -     17637 ag-t-gga-a-gg-a--aa----agc
i Papio_cynocephalus.k141_703094                         C 0 C 0
s Papio_hamadryas.Contig39                                20592367 15 +  20919399 ag-t-gga-a-gg-a--aa----agc
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  31632 15 +     41871 ag-t-gga-a-gg-a--aa----agc
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_2087334                                    7215 15 -     13745 ag-t-gga-a-gg-a--aa----agc
i Papio_papio.k141_2087334                               C 0 C 0
s Papio_ursinus.k141_4818248                                 14715 15 +     25215 ag-t-gga-a-gg-a--aa----agc
i Papio_ursinus.k141_4818248                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42108 16 -     78924 ga-t-ggaag-aa-a--ga-ca-g--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 1 I 2
s Perodicticus_ibeanus.k141_1387561                          11657 15 +     15382 GG-C-AAA-A-GT-A--AA----GCC
i Perodicticus_ibeanus.k141_1387561                      I 1 C 0
s Perodicticus_potto.k141_842195                             18207 15 -     21729 GG-C-AAA-A-GT-A--AA----GCC
i Perodicticus_potto.k141_842195                         I 1 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13450 16 +     28765 GG-A-TGA-A-GGGG--AA----GCC
i Perognathus_longimembris.PerPac_flattened_line_39705   I 8 C 0
s Peromyscus_maniculatus.KI615324.1                       18244852 15 -  18517816 TA-T-GGA-A-GG-A--AA----ACC
i Peromyscus_maniculatus.KI615324.1                      I 1 I 3
s Phocoena_phocoena.PhoPho_flattened_line_24159              38754 15 +     63832 ga-t-gaa-g-ga-agtaa----a--
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 1 I 2
s Piliocolobus_badius.k141_2704958                           28667 15 -     55023 ag-c-gga-a-gg-a--aa----agc
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64085 15 +     89929 ag-c-gga-a-gg-a--aa----agc
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14176 15 -     40849 ag-c-aga-a-gg-a--aa----agc
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326653 15 -  14605196 AG-C-AGA-A-GG-A--AA----AGC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                             19468 15 +     26961 ag-c-gga-a-gg-a--aa----acc
i Pithecia_albicans.k141_1476471                         I 1 C 0
s Pithecia_chrysocephala.k141_839575                         15481 15 +     23417 ag-c-gga-a-gg-a--ga----acc
i Pithecia_chrysocephala.k141_839575                     I 1 C 0
s Pithecia_hirsuta.k141_305604                               19462 15 +     29694 ag-c-gga-a-gg-a--aa----acc
i Pithecia_hirsuta.k141_305604                           I 1 C 0
s Pithecia_mittermeieri.k141_446740                          44497 15 +     52772 ag-c-gga-a-gg-a--aa----acc
i Pithecia_mittermeieri.k141_446740                      I 1 C 0
s Pithecia_pissinattii.k141_1824269                          19488 15 +     26198 ag-c-gga-a-gg-a--aa----acc
i Pithecia_pissinattii.k141_1824269                      I 1 C 0
s Pithecia_pithecia.tarseq_165                             3955823 15 +   4542175 ag-c-gga-a-gg-a--aa----acc
i Pithecia_pithecia.tarseq_165                           I 1 C 0
s Pithecia_vanzolinii.k141_1697688                           19415 15 -     23490 ag-c-gga-a-gg-a--aa----acc
i Pithecia_vanzolinii.k141_1697688                       I 1 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           4922 15 -      7527 ga-t-gaa-g-ga-agtaa----a--
i Platanista_gangetica.PlaMin_flattened_line_175331      I 1 I 2
s Plecturocebus_bernhardi.k141_2549090                       22190 15 -     39866 AG-T-GGA-A-GG-A--AA----ACC
i Plecturocebus_bernhardi.k141_2549090                   I 1 C 0
s Plecturocebus_brunneus.k141_1495506                        31348 15 +     34906 AG-T-GGA-A-GG-A--AA----ACC
i Plecturocebus_brunneus.k141_1495506                    I 1 C 0
s Plecturocebus_caligatus.k141_1382851                       35611 15 +     87950 AG-T-GGA-A-GG-A--AA----ACC
i Plecturocebus_caligatus.k141_1382851                   I 1 C 0
s Plecturocebus_cinerascens.k141_1164729                     36410 15 +     88961 AG-T-GGA-A-GG-A--AA----ACC
i Plecturocebus_cinerascens.k141_1164729                 I 1 C 0
s Plecturocebus_cupreus.k141_2351393                         22103 15 +     39403 AG-T-GGA-A-GG-A--AA----ACC
i Plecturocebus_cupreus.k141_2351393                     I 1 C 0
s Plecturocebus_dubius.k141_1058799                          35879 15 -     87928 AG-T-GGA-A-GG-A--AA----ACC
i Plecturocebus_dubius.k141_1058799                      I 1 C 0
s Plecturocebus_grovesi.k141_2013005                         42860 15 +     60166 AG-T-GGA-A-GG-A--AA----ACC
i Plecturocebus_grovesi.k141_2013005                     I 1 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43053 15 +     67232 AG-T-GGA-A-GG-A--AA----ACC
i Plecturocebus_hoffmannsi.k141_3303950                  I 1 C 0
s Plecturocebus_miltoni.k141_349282                          38518 15 +     90634 AG-T-GGA-A-GG-A--AA----ACC
i Plecturocebus_miltoni.k141_349282                      I 1 C 0
s Plecturocebus_moloch.k141_1031110                          35901 15 -     89403 AG-T-GGA-A-GG-A--AA----ACC
i Plecturocebus_moloch.k141_1031110                      I 1 C 0
s Pongo_abelii.CM009266.2                                189181822 16 + 189387572 ga-gtgga-a-gg-a--aa----agc
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9596716 16 +   9816681 ga-gtgga-a-gg-a--aa----agc
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              18252 15 -     69807 ag-t-gga-a-gg-a--aa----agg
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              11614 15 +     80239 ag-t-gga-a-gg-a--aa----agg
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_112514                11523 12 +     16234 GA-C-AGG-A-G--A--AG----G--
i Procavia_capensis.ProCapCap_scaffold_112514            I 1 C 0
s Prolemur_simus.MPIZ01000396.1                            2616910 16 -   4620579 GGAT-GGA-A-GG-A--AA----AGC
i Prolemur_simus.MPIZ01000396.1                          I 1 C 0
s Propithecus_coquerelli.NW_012148875.1                    1012966 16 +   2598838 GGAT-GGA-A-GG-A--AA----AGC
i Propithecus_coquerelli.NW_012148875.1                  I 1 C 0
s Propithecus_coronatus.k141_114130                           9034 16 -     19127 ggat-gga-a-gg-a--aa----agc
i Propithecus_coronatus.k141_114130                      I 1 C 0
s Propithecus_diadema.k141_599139                            10128 16 +     10533 ggat-gga-a-gg-a--aa----agc
i Propithecus_diadema.k141_599139                        I 1 C 0
s Propithecus_edwardsi.k141_635656                             370 16 +     30655 ggat-gaa-a-gg-a--aa----agc
i Propithecus_edwardsi.k141_635656                       I 1 C 0
s Propithecus_perrieri.k141_217725                            2562 16 +     14082 ggat-gga-a-gg-a--aa----agc
i Propithecus_perrieri.k141_217725                       I 1 C 0
s Propithecus_tattersalli.k141_790011                        50247 16 -     67325 ggat-gga-a-gg-a--aa----agc
i Propithecus_tattersalli.k141_790011                    I 1 C 0
s Propithecus_verreauxi.k141_1047036                          7040 16 -     35169 ggat-gga-a-gg-a--aa----agc
i Propithecus_verreauxi.k141_1047036                     I 1 C 0
s Psammomys_obesus.NESX01036367.1                            19241 15 -     31435 TA-C-GGA-A-GG-A--AC----CCT
i Psammomys_obesus.NESX01036367.1                        I 1 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14099 16 +     25061 ga-c-agaag-ga-t--ga-ca-g--
i Pteronura_brasiliensis.PteBra_flattened_line_42152     I 1 I 2
s Puma_concolor.QAVW01001104.1                            20305776 16 -  38429054 ga-t-ggaag-ga-a--ga-ca-t--
i Puma_concolor.QAVW01001104.1                           I 1 I 2
s Pygathrix_cinerea.k141_1153803                             40322 15 -     91421 ag-t-gga-a-gg-a--aa----agg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7634502 15 +   7812017 ag-t-gga-a-gg-a--aa----agg
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             40364 15 -     72585 ag-t-gga-a-gg-a--aa----agg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31095 15 +     55207 ga-g-gga-g-ga-agtaa----g--
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 1 I 2
s Rattus_norvegicus.chr16                                 53606012 15 +  90668790 ta-T-GGA-G-AG-A--GA----ACT
i Rattus_norvegicus.chr16                                I 1 I 3
s Rhinopithecus_bieti.k119_188731                            15570 15 -     21983 ag-t-gga-a-gg-a--aa----agg
i Rhinopithecus_bieti.k119_188731                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91261939 15 - 195417433 ag-t-gga-a-gg-a--aa----agg
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7701030 15 +   7961872 ag-t-gga-a-gg-a--aa----agg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1158  9 -      3450 aa-t-gaa-g-ga-------------
i Saiga_tatarica.SaiTat_scaffold_455678                  I 1 I 4
s Saimiri_boliviensis.NW_024100920.1                     119968325 15 - 121099817 AG-T-GGA-A-GG-A--AA----ACC
i Saimiri_boliviensis.NW_024100920.1                     I 1 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40617 15 +     46362 AG-T-GGA-A-GG-A--AA----ACC
i Saimiri_cassiquiarensis.k141_2188234                   I 1 C 0
s Saimiri_macrodon.k141_716185                               40677 15 +     45824 AG-T-GGA-A-GG-A--AA----ACC
i Saimiri_macrodon.k141_716185                           I 1 C 0
s Saimiri_oerstedii.k141_1487881                             57345 15 -     64574 AG-T-GGA-A-GG-A--AA----ACC
i Saimiri_oerstedii.k141_1487881                         I 1 C 0
s Saimiri_sciureus.k141_2278166                              20439 15 -     23631 AG-T-GGA-A-GG-A--AA----ACC
i Saimiri_sciureus.k141_2278166                          I 1 C 0
s Saimiri_ustus.k141_1484609                                 40603 15 -     61129 AG-T-GGA-A-GG-A--AA----ACT
i Saimiri_ustus.k141_1484609                             I 1 C 0
s Sapajus_apella.ctg103                                    5441801 15 -   5703754 AG-T-GGA-A-GG-A--AA----GCC
i Sapajus_apella.ctg103                                  I 1 C 0
s Sapajus_macrocephalus.k141_351809                          72886 15 -     80660 AG-T-GGA-A-GG-A--AA----GCC
i Sapajus_macrocephalus.k141_351809                      I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    176922 14 -    313613 ga-g-gaa-ggga-a--ga----c--
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 I 2
s Semnopithecus_entellus.k141_1705875                         5570 15 +     17286 ag-t-gga-a-gg-a--aa----agg
i Semnopithecus_entellus.k141_1705875                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                       5695 15 -     58920 ag-t-gga-a-gg-a--aa----agg
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                            5603 15 +     45317 ag-t-gga-a-gg-a--aa----agg
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_960425                             5716 15 +      9426 ag-t-gga-a-gg-a--aa----agg
i Semnopithecus_priam.k141_960425                        C 0 C 0
s Semnopithecus_schistaceus.k141_972136                       5609 15 +     24620 ag-t-gga-a-gg-a--aa----agg
i Semnopithecus_schistaceus.k141_972136                  C 0 C 0
s Semnopithecus_vetulus.k141_654052                           1539 15 -      5251 ag-t-gga-a-gg-a--aa----agg
i Semnopithecus_vetulus.k141_654052                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                     4322 15 -     77746 TA-T-GAA-G-GA-A--AA----ACC
i Sigmodon_hispidus.SigHis_scaffold_20193                I 1 I 3
s Solenodon_paradoxus.SolPar_flattened_line_126              23019 13 +   1910179 GA-T-GGA-G-GA-A--AA----T--
i Solenodon_paradoxus.SolPar_flattened_line_126          I 1 I 2
s Sorex_araneus.JH798187.1                                13682158 13 -  18376816 aa-a-aga-a-ca-a--ag----g--
i Sorex_araneus.JH798187.1                               I 1 I 2
s Spermophilus_dauricus.KZ294078.1                         1975966 14 -   3870691 GA-C-AAA-G-GG-T--AA----AT-
i Spermophilus_dauricus.KZ294078.1                       I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             58880 16 +     97271 ga-t-agaag-ga-a--ca-ca-g--
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 1 I 2
s Suricata_suricatta.SurSur_flattened_line_6629              47860 16 -    196729 ga-t-ggaaa-ga-a--ga-ca-g--
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 I 2
s Sus_scrofa.CM000828.4                                   63022628 13 -  69701581 ga-t-aaa-g-ga-a--ga----c--
i Sus_scrofa.CM000828.4                                  I 1 I 2
s Symphalangus_syndactylus.tarseq_199                      1105110 15 -   1523678 ag-g-gga-a-gg-a--aa----agc
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93670 12 +    116680 gaac-aga-a-gg-a--a--------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138487 16 -    156842 ga-t-gaaag-ga-a--aact--g--
i Tapirus_indicus.TapInd_scaffold_9301                   I 1 I 2
s Tapirus_terrestris.TapTer_scaffold_755                    406959 16 +    539355 ga-t-gaaag-ga-a--aact--g--
i Tapirus_terrestris.TapTer_scaffold_755                 I 1 I 2
s Tarsius_lariang.k141_2201908                               50384 15 +     70052 ga-t-aga-g-gg-a--aa----acc
i Tarsius_lariang.k141_2201908                           I 1 C 0
s Tarsius_wallacei.k141_722827                               14776 15 +     18080 GA-T-AGA-G-GG-A--AA----ACC
i Tarsius_wallacei.k141_722827                           I 1 C 0
s Theropithecus_gelada.CM009954.1                        186466085 15 + 186847797 GG-T-GGA-A-GG-A--AA----AGC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_41106                    5634  8 +     27660 ---------A-GG-A--AG----G-C
i Tolypeutes_matacus.TolMat_scaffold_41106               N 0 C 0
s Trachypithecus_auratus.k141_95322                          12085 15 -     15799 ag-t-gga-a-gg-a--aa----agg
i Trachypithecus_auratus.k141_95322                      C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     25452 15 +     78344 ag-t-gga-a-gg-a--aa----agg
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_581431                       12256 15 -     15970 ag-t-gga-a-gg-a--aa----agg
i Trachypithecus_cristatus.k141_581431                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      11218 15 +     62838 ag-t-gga-a-gg-g--aa----agg
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_119873                            12183 15 -     17556 ag-t-gga-a-gg-a--aa----agg
i Trachypithecus_geei.k141_119873                        C 0 C 0
s Trachypithecus_germaini.k141_545543                        12197 15 -     15912 ag-t-gga-a-gg-a--aa----agg
i Trachypithecus_germaini.k141_545543                    C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      11147 15 +     64340 ag-t-gga-a-gg-g--aa----agg
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          12146 15 +     63452 ag-t-gga-a-gg-g--aa----agg
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_283481                   11221 15 +     21341 ag-t-gga-a-gg-g--aa----agg
i Trachypithecus_leucocephalus.k141_283481               C 0 C 0
s Trachypithecus_melamera.k141_261742                         1283 15 +     11697 ag-t-gga-a-gg-a--aa----agg
i Trachypithecus_melamera.k141_261742                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                        13064 15 +     33539 ag-t-gga-a-gg-a--aa----agg
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5964892 15 +   6242583 ag-t-gga-a-gg-a--aa----agg
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_583962                        12980 15 +     14028 ag-t-gga-a-gg-a--aa----agg
i Trachypithecus_pileatus.k141_583962                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                     4788 15 +    200418 ga-t-gaa-g-ga-aggaa----g--
i Tragulus_javanicus.TraJav_scaffold_3462                I 1 I 2
s Trichechus_manatus.JH594705.1                            4313597 14 +  10818551 AA-C-TGA-A-A--A--AG----GTC
i Trichechus_manatus.JH594705.1                          I 1 C 0
s Tursiops_truncatus.MRVK01000835.1                       15765464 15 +  33153633 ga-t-gaa-g-ga-agtaa----a--
i Tursiops_truncatus.MRVK01000835.1                      I 1 I 2
s Uropsilus_gracilis.UroGra_scaffold_12083                   77589 14 -     77625 ga-g-gaa-aaga-a--ga----c--
i Uropsilus_gracilis.UroGra_scaffold_12083               n 17 T 12087
s Ursus_maritimus.KK499267.1                               4878195 16 -   5085361 ga-c-agaag-ga-a--ga-ta-g--
i Ursus_maritimus.KK499267.1                             I 1 I 2
s Varecia_rubra.k141_590885                                  31600 16 +     50397 ggat-gga-a-gg-a--aa----agc
i Varecia_rubra.k141_590885                              I 1 C 0
s Varecia_variegata.k141_1100575                              6689 16 +     25465 ggat-gga-a-gg-a--aa----agc
i Varecia_variegata.k141_1100575                         I 1 C 0
s Vicugna_pacos.KN270157.1                                 5389974 13 -   5488506 ga-t-gaa-g-ga-a--ga----c--
i Vicugna_pacos.KN270157.1                               I 1 I 2
s Vulpes_lagopus.VulLag_flattened_line_30954                 42724 16 -     43706 ga-t-agaag-ga-a--ga-ca-g--
i Vulpes_lagopus.VulLag_flattened_line_30954             I 1 I 2
s Xerus_inauris.XerIna_scaffold_2302                         24607 14 +    224448 GA-C-AGA-G-GG-A--AA----AT-
i Xerus_inauris.XerIna_scaffold_2302                     I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29789 16 +     86975 ga-t-agaag-ga-a--ga-ca-g--
i Zalophus_californianus.ZalCal_flattened_line_17732     I 1 I 2
s Zapus_hudsonius.ZapHud_scaffold_11398                      38751 16 +     63895 AA-T-GGG-A-GG-A--AA---TGGG
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 1 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21611 15 -     22999 ga-t-gaa-g-ga-agtaa----a--
i Ziphius_cavirostris.ZipCav_flattened_line_16896        I 1 I 2
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Desmodus_rotundus.KZ672289.1                             8650437  3 +  20541912 I
e Carollia_perspicillata.CarPer_scaffold_737331                421  3 -       918 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                 26946  3 +     43469 I
e Tonatia_saurophila.TonSau_scaffold_294                    103728  3 +    610378 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                31530  0 +     41958 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17424  0 +    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                        389332  0 -   3329780 C
e Pteropus_vampyrus.KN525825.1                             1390053  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              23005967  0 +  28871421 C
e Pteronotus_parnellii.KE854991.1                             1663  0 -     11709 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 162106  0 -    366855 C
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_39861                18895  3 -     30105 I
e Megaderma_lyra.MegLyr_scaffold_4542                        36015  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                 24123  0 +    270270 C
e Hipposideros_galeritus.HipGal_scaffold_65612                9129  0 -     20285 C
e Hipposideros_armiger.JXIK01000431.1                       132216  0 +   1711038 C
e Eidolon_helvum.KE797349.1                                  19343  0 -     31197 C
e Craseonycteris_thonglongyai.CraTho_scaffold_153350           127  2 +      5041 I
e Anoura_caudifer.AnoCau_scaffold_1412                      209496  3 +    412891 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11110 24 +     36723 A-G---TG--------------------G--CTGAAGCACAG--------------TGGCTC-----------------AT
s Acinonyx_jubatus.LLWD01001279.1                           836392 13 +   1699592 ------c-t--a----------------a--gtgga--gcag---------------------------------------
i Acinonyx_jubatus.LLWD01001279.1                        I 2 I 7
s Acomys_cahirinus.AcoCah_scaffold_21377                     10656 23 -     63021 -----------------------------------------G--------------TGACA---GGAGGGGAGTAACCCAT
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538323 24 -  29979442 ------c-tg------------------a--gtgga--gcagNNNNNNNNNN----g------------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  I 2 C 0
s Ailurus_fulgens.LNAC01001112.1                            107774 24 -    347723 ------c-tg------------------a--gtgga--tcagNNNNNNNNNN----a------------------------
i Ailurus_fulgens.LNAC01001112.1                         I 2 C 0
s Allactaga_bullata.AllBul_scaffold_20030                     1336 23 +     61208 -----------------------------------------GNNNNNNNNNNNNNNTGTCTC-----------------AT
i Allactaga_bullata.AllBul_scaffold_20030                I 3 C 0
s Allenopithecus_nigroviridis.k141_3361533                   40670 26 -     52922 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          6992 26 +     11307 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Allochrocebus_lhoesti.k141_1932296                     C 0 C 0
s Allochrocebus_preussi.k141_499905                           7164 26 -     13300 a-gcg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Allochrocebus_preussi.k141_499905                      C 0 C 0
s Allochrocebus_solatus.k141_139760                           9045 26 +     12926 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Allochrocebus_solatus.k141_139760                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             31709 26 +     51355 a-gca-tg--------------------a--ccgaagcgtag--------------gagctc-----------------at
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               24855 26 -     36483 a-gca-tg--------------------a--ccgaagcgcag--------------gagctc-----------------at
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              6960 26 -     13496 a-gca-tg--------------------a--ccgaagcgtag--------------gagctc-----------------at
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23742 26 +     27940 A-GCA-TG--------------------A--CCGAAGCGCAG--------------GAGCTC-----------------AT
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15550 26 -     39310 A-GCA-TG--------------------A--CCGAAGCGCAG--------------GAGCTC-----------------AT
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            23808 26 +     30492 a-gca-tg--------------------a--ccgaagcgcag--------------gagctc-----------------at
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28039 26 +     47717 a-gca-tg--------------------a--ccgaagcgcag--------------gagctc-----------------at
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_2029433                            79011 26 +     87306 a-gca-tg--------------------a--ccgaagcgcag--------------gagctc-----------------at
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             38993 26 +     50774 A-GCA-TG--------------------A--CCGAAGCGCAG--------------GAGCTC-----------------AT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707734 17 -   2318259 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Ammotragus_lervia.NIVO01071767.1                       I 4 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303             26964 17 -     32520 ----------------------------------ga--ccagNNNNNNNNNN----g------------------------
i Antilocapra_americana.AntAmePen_scaffold_43303         I 2 C 0
s Aotus_azarae.k141_2596348                                   5241 26 +     12024 a-gca-tg--------------------a--ctgaagctcag--------------gagctc-----------------at
i Aotus_azarae.k141_2596348                              C 0 C 0
s Aotus_griseimembra.k141_2227177                             4907 26 -     10972 a-gca-tg--------------------a--ctgaagcgcag--------------gagctc-----------------at
i Aotus_griseimembra.k141_2227177                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4333368 26 -   5030052 A-GCA-TG--------------------A--CTGAAGCTCAG--------------GATCTC-----------------AT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_1801223                              5300 26 -     12698 a-gca-tg--------------------a--ctgaagcgcag--------------gagctc-----------------at
i Aotus_trivirgatus.k141_1801223                         C 0 C 0
s Aotus_vociferans.k141_506037                                4760 26 -     11998 a-gca-tg--------------------a--ctgaagcgcag--------------gagctc-----------------at
i Aotus_vociferans.k141_506037                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22174  3 +     39421 -------------------------------------------------------------c-----------------ca
i Aplodontia_rufa.AprRuf_scaffold_37633                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       14249 26 +     45910 A-GTG-TG--------------------A--CTGGAGCAAAG--------------GAGCCT-----------------GT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21232004 26 -  21539123 a-gca-tg--------------------a--cggaagcacag--------------gagctc-----------------at
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3076 26 -     48076 a-gca-tg--------------------a--ccgaagcacag--------------gagctc-----------------at
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18542 26 -     22344 a-gca-tg--------------------a--ccgaagcacag--------------gagctc-----------------at
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31598 26 -     89868 a-gca-tg--------------------a--cggaagcacag--------------gagctc-----------------at
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36011 26 -     40414 a-gca-tg--------------------a--ccgaagcacag--------------gagctc-----------------at
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                43845 26 +     72325 a-gca-tg--------------------a--cggaagcacag--------------gagctc-----------------at
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75600 26 -     92717 a-atg-tg--------------------a--caggagcaaag--------------tagctc-----------------gt
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              76183 26 +     85213 a-atg-tg--------------------a--caggagcaaag--------------tagctc-----------------gt
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222393 17 +  23207421 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Balaenoptera_acutorostrata.KI537508.1                  I 2 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4396 17 +     25979 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Balaenoptera_bonaerensis.DF411050.1                    I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     12792 17 -    124022 ----------------------------------ga--acagNNNNNNNNNN----G------------------------
i Beatragus_hunteri.BeaHun_scaffold_7278                 I 8 C 0
s Bison_bison.KN261452.1                                    232970 17 -    288883 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Bison_bison.KN261452.1                                 I 2 C 0
s Bos_indicus.CM003047.1                                  20306345 17 +  48749331 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Bos_indicus.CM003047.1                                 I 2 C 0
s Bos_mutus.JH880303.1                                     1159447 17 -   1948126 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Bos_mutus.JH880303.1                                   I 2 C 0
s Bos_taurus.CM000203.6                                   18116557 17 +  45695690 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Bos_taurus.CM000203.6                                  I 2 C 0
s Bubalus_bubalis.KI419123.1                               2851396 17 +   4408762 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Bubalus_bubalis.KI419123.1                             I 2 C 0
s Cacajao_ayresi.k141_552049                                116868 26 -    122966 A-GCG-TG--------------------A--CTGAAGTGCAG--------------GCGCTC-----------------GT
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76346 26 +     81800 A-GCG-TG--------------------A--CTGAAGTGCAG--------------GCGCTC-----------------GT
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45551 26 -     95584 A-GCG-TG--------------------A--CTGAAGTGCAG--------------GCGCTC-----------------GT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69646 26 -    119600 a-gcg-tg--------------------a--ctgaagtgcag--------------gcgctc-----------------gt
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020376 27 -  17673402 ------t-tgt-----------------actggtga--acagNNNNNNNNNN----g------------------------
i Camelus_bactrianus.KN276810.1                          I 2 C 0
s Camelus_dromedarius.KN272107.1                           2353206 27 -   7040546 ------t-tgt-----------------actggtga--acagNNNNNNNNNN----g------------------------
i Camelus_dromedarius.KN272107.1                         I 2 C 0
s Camelus_ferus.KB017975.1                                  421465 27 -   1652518 ------t-tgt-----------------actggtga--acagNNNNNNNNNN----g------------------------
i Camelus_ferus.KB017975.1                               I 2 C 0
s CanFam4.chr16                                           17831665 24 -  60362399 ------c-t--a----------------a--gtgga--gcagNNNNNNNNNN----g------------------------
i CanFam4.chr16                                          I 2 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32409 24 -     43241 ------c-t--a----------------a--gtgga--gcagNNNNNNNNNN----g------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_27089                I 2 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067133 24 -   9314153 ------c-t--a----------------a--gtgga--gcagNNNNNNNNNN----g------------------------
i Canis_lupus_dingo.QKWQ01000480.1                       I 2 C 0
s Canis_lupus_familiaris.chr16                            17991792 24 -  59632846 ------c-t--a----------------a--gtgga--gcagNNNNNNNNNN----g------------------------
i Canis_lupus_familiaris.chr16                           I 2 C 0
s Canis_lupus_orion.HG994398.1                            18532898 24 +  63665305 ------c-t--a----------------a--gtgga--gcagNNNNNNNNNN----g------------------------
i Canis_lupus_orion.HG994398.1                           I 2 C 0
s Capra_aegagrus.CM003241.1                               18861797 17 +  46296322 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Capra_aegagrus.CM003241.1                              I 4 C 0
s Capra_hircus.CM004588.1                                 18092515 17 -  44709034 ----------------------------------GA--ACAGNNNNNNNNNN----G------------------------
i Capra_hircus.CM004588.1                                I 4 C 0
s Carlito_syrichta.NW_007259797.1                           179822 26 -    496798 A-GTG-TG--------------------T--CCTCAGCAGAA--------------CAGCTC-----------------AT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    167055 23 +    179628 --G-T--A--------------------A--TTGGAGCAAAG--------------TTGCTC-----------------AG
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                    113339 26 +    217609 ------t-tgta----------------a--gtgga--acagNNNNNNNNNN----g------------------------
i Catagonus_wagneri.CatWag_scaffold_2839                 I 2 C 0
s Cebus_albifrons.Contig27                                25675490 26 +  26074798 g-gca-tg--------------------a--ctgaagtgcag--------------gagctc-----------------ac
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               21958 26 +     28840 g-gca-tg--------------------a--ctgaagtgcag--------------gagctc-----------------ac
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7629 26 +     13997 g-gca-tg--------------------a--ctgaagtgcag--------------gagctc-----------------ac
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29747 26 +     31688 A-GTG-TG--------------------T--CCTCAGCAGAA--------------CAGCTC-----------------AT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12257172 24 +  27778364 ------g-t--a----------------a--gtgga--acagNNNNNNNNNN----g------------------------
i Ceratotherium_simum.JH767749.1                         I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          2879 24 +     15641 ------g-t--a----------------a--gtgga--acagNNNNNNNNNN----g------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     I 2 C 0
s Cercocebus_atys.KQ010504.1                               4501644 26 +   4669795 A-GTg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_2766003                       22916 26 -     30935 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Cercocebus_chrysogaster.k141_2766003                   C 0 C 0
s Cercocebus_lunulatus.k141_245046                            7318 26 +     18174 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Cercocebus_lunulatus.k141_245046                       C 0 C 0
s Cercocebus_torquatus.k141_4063387                           7155 26 +     18249 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Cercocebus_torquatus.k141_4063387                      C 0 C 0
s Cercopithecus_ascanius.k141_4281816                         2274 26 -      5884 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Cercopithecus_ascanius.k141_4281816                    C 0 C 0
s Cercopithecus_cephus.k141_1630443                           1298 26 +      4620 A-GTG-TG--------------------G--CTGAAGCACAG--------------TGGCTC-----------------AC
i Cercopithecus_cephus.k141_1630443                      C 0 C 0
s Cercopithecus_diana.k141_488174                             7734 26 +     10982 A-GTG-TG--------------------G--CTGAAGCACAG--------------TGGCTC-----------------AC
i Cercopithecus_diana.k141_488174                        C 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1280 26 +      4810 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Cercopithecus_hamlyni.k141_1302205                     C 0 C 0
s Cercopithecus_lowei.k141_4082698                            7196 26 +     34178 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Cercopithecus_lowei.k141_4082698                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38849306 26 +  39242232 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21252906 26 -  21565898 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_557928                         7362 26 -     18401 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Cercopithecus_neglectus.k141_557928                    C 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7425 26 -     15013 A-GTG-TG--------------------G--CTGAAGCACAG--------------TGGCTC-----------------AC
i Cercopithecus_nictitans.k141_1200139                   C 0 C 0
s Cercopithecus_petaurista.k141_365908                        7396 26 +     11214 A-GTG-TG--------------------G--CTGAAGCACAG--------------TGGCTC-----------------AC
i Cercopithecus_petaurista.k141_365908                   C 0 C 0
s Cercopithecus_pogonias.k141_391400                          2216 26 -     13831 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Cercopithecus_pogonias.k141_391400                     C 0 C 0
s Cercopithecus_roloway.k141_1248991                         27390 26 +     68532 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Cercopithecus_roloway.k141_1248991                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             463 26 -      1897 G-GGG-TC--------------------A--AAGGAGCAG-G--------------CAGCTT----------------TGT
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       C 0 C 0
s Cheirogaleus_major.k141_333249                             43589 26 -     52598 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           38922 26 +     57038 a-gcg-tg--------------------a--ctggagcagag--------------cagctc-----------------gt
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Cheracebus_lucifer.k141_49986                               9767 25 -     17098 A-GCG-TG--------------------A--CTG-AGTGCAG--------------GAGCTC-----------------GT
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9637 25 +     17877 A-GCA-TG--------------------A--CTG-AGTGCAG--------------GAGCTC-----------------GT
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167204 25 -    216457 a-gcg-tg--------------------a--ctg-agtgcag--------------gagctc-----------------gt
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71677 25 +     76511 A-GCG-TG--------------------A--CTG-AGTGCAG--------------GAGCTC-----------------GT
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          113893 26 +    146308 a-gcg-tg--------------------a--ctgaagtgcag--------------gcgctc-----------------gt
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          45801 26 -     50570 A-GCG-TG--------------------A--CTGAAGTGCAG--------------GCGCTC-----------------GT
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455174 26 -  18827391 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41117 26 -     50209 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448099 26 + 135778131 A-GTg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   667 28 -     25429 AGGGA-TA--------------------A--AAGGAGGAGAG--------------TAGCTT----------------TGT
i Choloepus_didactylus.ChoDid_scaffold_22546             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            195795 28 +    839153 agg-gata--------------------a--aaggaggagag--------------tagctt---t-------------gt
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               6503 27 -      9651 a-gtg-ta--------------------a--ttaaagcagag--------------tagctt---t-------------at
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          C 0 C 0
s Colobus_angolensis.KN981557.1                            1936040 26 +   2368649 A-GTg-tg--------------------g--ctgaagcacag--------------tggctc-----------------at
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199970018 26 + 200372422 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------at
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              58332 26 +     84244 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AT
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17566246 16 -  53390261 ------C-----------------CCTAA--GGGGA--ACAG--------------A------------------------
i Condylura_cristata.JH655891.1                          I 2 I 10
s Cricetomys_gambianus.CriGam_scaffold_14425                 16559 23 +     83289 -----------------------------------------G--------------TGACAA---GAGGAGAATATCCCAT
i Cricetomys_gambianus.CriGam_scaffold_14425             I 3 C 0
s Cricetulus_griseus.LT883664.1                           11697191 23 + 224834208 -----------------------------------------G--------------TGACAG---GAAGACAGTAACCCAT
i Cricetulus_griseus.LT883664.1                          I 3 C 0
s Crocidura_indochinensis.CroInd_scaffold_123729              8599 12 -      9007 ------C-------------------TTA--TGAAA--CCC----------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_123729         I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59107 27 -     87169 ------a--gt-ta--a-----------a--gtgga--acagNNNNNNNNNN----g------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 2 C 0
s Dasypus_novemcinctus.JH564415.1                            92264 26 +   2246927 --gcg-tG--------------------C--AAGGAGCAGGG--------------CGGCTT----------------GGG
i Dasypus_novemcinctus.JH564415.1                        C 0 I 1
s Daubentonia_madagascariensis.ctg71                      12562361 26 -  12879189 a-gtg-tg--------------------g--ctggtgcagag--------------tagctt-----------------gt
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16841544 17 +  35494412 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Delphinapterus_leucas.KZ290073.1                       I 2 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  698968 23 +   1390856 ------g-t--a----------------a--gtgga--acagNNNNNNNNN-----g------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                   31770 24 +    198055 ------g-t--a----------------a--gtgga--acagNNNNNNNNNN----g------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               I 2 C 0
s Dipodomys_ordii.KN672350.1                              18914593 23 +  37912305 A-C-T--G------------------CAA--CTGAAGCCT-----------------TCTCT-----------------AT
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_47531                  13191 23 -     26976 A-C-T--G------------------CAA--CTGAAGCCT-----------------TCTCT-----------------AT
i Dipodomys_stephensi.DipSte_scaffold_47531              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       341971 17 +    607251 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Elaphurus_davidianus.JRFZ01104969.1                    I 2 C 0
s Ellobius_lutescens.LOEQ01008920.1                          47587 23 -    110024 -----------------------------------------G--------------TGACAG---GAGGAGAGTAGTCTGT
i Ellobius_lutescens.LOEQ01008920.1                      I 3 C 0
s Ellobius_talpinus.LOJH01050844.1                            8840 23 +     12610 -----------------------------------------G--------------TGACAG---GAGGAGAGTAGCCTGT
i Ellobius_talpinus.LOJH01050844.1                       I 3 C 0
s Enhydra_lutris.KZ291758.1                               16365670 24 -  41312741 ------c-tg------------------a--gtgaa--tcagNNNNNNNNNN----a------------------------
i Enhydra_lutris.KZ291758.1                              I 2 C 0
s Equus_asinus.JREZ01000139.1                              1310276 24 +   4378816 ------a-t--a----------------a--gtgga--acagNNNNNNNNNN----g------------------------
i Equus_asinus.JREZ01000139.1                            I 2 C 0
s Equus_caballus.CM000403.2                               18557744 24 -  39960074 ------c-t--a----------------a--gtgga--acagNNNNNNNNNN----g------------------------
i Equus_caballus.CM000403.2                              I 2 C 0
s Equus_przewalskii.KK951119.1                               59785 24 +    498745 ------c-t--a----------------a--gtgga--acagNNNNNNNNNN----g------------------------
i Equus_przewalskii.KK951119.1                           I 2 C 0
s Erythrocebus_patas.Contig38                             21237380 26 -  21539334 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           40726 17 +    133382 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Eschrichtius_robustus.EscRob_flattened_line_8968       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5019 17 -     25849 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Eubalaena_japonica.EubJap_flattened_line_57114         I 2 C 0
s Eulemur_albifrons.k141_1869827                             12708 26 -     21348 a-gtg-tg--------------------a--ctagagcagag--------------tagctc-----------------at
i Eulemur_albifrons.k141_1869827                         C 0 C 0
s Eulemur_collaris.k141_601111                                9910 26 +     70999 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                               7649 26 -    112731 a-gtg-tg--------------------a--ctagagcagag--------------tagctc-----------------gt
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                              6659 26 -     68309 a-gtg-tg--------------------a--ctagagcagag--------------tagctc-----------------gt
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_2627385                                 3795 26 -      9374 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Eulemur_fulvus.k141_2627385                            C 0 C 0
s Eulemur_macaco.k141_1562045                                32890 26 +     75513 a-atg-tg--------------------a--ctagagcagag--------------tagctc-----------------gt
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 30774 26 +     97555 a-gtg-tg--------------------a--ctagagcagag--------------tagctc-----------------gt
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            7430 26 -     30972 a-atg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_1120150                                  7307 26 +     16616 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Eulemur_rufus.k141_1120150                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              33892 26 +    111500 a-gtg-tg--------------------a--ctagagcagag--------------tagctc-----------------at
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20267546 13 + 206538554 ------c-t--a----------------a--gtgga--gcag---------------------------------------
i Felis_catus.CM001381.2                                 I 2 I 7
s Felis_catus_fca126.CM031415.1                           20226324 13 + 205367284 ------c-t--a----------------a--gtgga--gcag---------------------------------------
i Felis_catus_fca126.CM031415.1                          I 2 I 7
s Felis_nigripes.FelNig_flattened_line_44075                  3334 13 -     25330 ------C-------------------TAA--GTGGA--GCAG---------------------------------------
i Felis_nigripes.FelNig_flattened_line_44075             I 2 I 7
s Galago_moholi.ctg3793                                        736 22 +    137831 G-GTG-TG--------------------A--TTGGAGCAGGG--------------GAGC---------------------
i Galago_moholi.ctg3793                                  C 0 I 15
s Galago_senegalensis.k141_991736                             1852 22 -     22493 G-GTG-TG--------------------A--TTGGAGCAGGG--------------GAGC---------------------
i Galago_senegalensis.k141_991736                        C 0 I 15
s Galagoides_demidoff.k141_1153324                           11755 22 +     12379 G-GTG-TG--------------------A--TTGGAGCAGGG--------------AAGT---------------------
i Galagoides_demidoff.k141_1153324                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_75343               15787 26 -     17176 a-gtg-tg--------------------a--ccagggcacag--------------tagctc-----------------tc
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     636828 17 -    660261 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  I 2 C 0
s Glis_glis.GliGli_scaffold_149316                            4996 10 +      8016 ----------------------------------------AG--------------TGGCTG-----------------AG
i Glis_glis.GliGli_scaffold_149316                       I 2 C 0
s Gorilla_beringei.k141_179627                                 877 24 +      1068 a-g---tg--------------------g--ctgaagcacag--------------tggctc-----------------at
i Gorilla_beringei.k141_179627                           C 0 C 0
s Gorilla_gorilla.LT578341.1                             186364991 24 + 186649187 A-g---tg--------------------g--ctgaagcacag--------------tggctc-----------------at
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   54747 10 +     78134 ----------------------------------------ag--------------tggctg-----------------ag
i Graphiurus_murinus.GraMur_scaffold_10447               I 2 C 0
s Hapalemur_alaotrensis.k141_330369                           7304 26 +     40692 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------at
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_435261                             16992 26 +     22537 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Hapalemur_gilberti.k141_435261                         C 0 C 0
s Hapalemur_griseus.k141_679418                              15639 26 -     28566 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Hapalemur_griseus.k141_679418                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         14371 26 +     42923 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17626 26 +     53142 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               272796 24 +    327341 ------C-------------------TGT--GTGGA--ACAGNNNNNNNNNN----G------------------------
i Helogale_parvula.HelPar_flattened_line_2585            I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14517 17 -     48891 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             I 4 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10218 15 -     15841 ------------------------------------CCACAG--------------CAGTCC----------------TGT
i Heterohyrax_brucei.HetBruBak_scaffold_90013            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6414 17 +     36432 ----------------------------------ga--acacNNNNNNNNNN----g------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_38803           I 2 C 0
s Hoolock_leuconedys.ctg274                                    460407 24 +    630532 a-g---tg--------------------g--ctgaagcacag--------------tggctc-----------------at
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   8477 24 -     22022 ------C-------------------TAA--GTGGA--ACAGNNNNNNNNNN----G------------------------
i Hyaena_hyaena.HyaHya_flattened_line_62789              I 2 C 0
s Hylobates_agilis.k141_967383                                1676 24 -      4846 A-G---TG--------------------G--CTGAAGCACAG--------------TGGCTC-----------------AT
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                134 24 -      8919 A-G---TG--------------------G--CTGAAGCACAG--------------TGGCTC-----------------AT
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555105 24 - 191637585 a-g---tg--------------------g--ctgaagcacag--------------tggctc-----------------at
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3347992 24 -  11177569 a-g---tg--------------------g--ctgaagcacag--------------tggctc-----------------at
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543731  3 -   7955117 -------------------------------------------------------------C-----------------CA
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_1997670                                    2131 26 +      8453 a-atg-tg--------------------a--ccggagcagag--------------tagctt-----------------gt
i Indri_indri.k141_1997670                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29136 17 -     31341 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Inia_geoffrensis.IniGeo_flattened_line_34779           I 2 C 0
s Jaculus_jaculus.JH725527.1                               8298601 23 -   9596543 -----------------------------------------GNNNNNNNNNNNNNNTAGCTC-----------------AT
i Jaculus_jaculus.JH725527.1                             I 3 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                  4887 17 +     97402 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Kogia_breviceps.KogBre_flattened_line_3970             I 2 C 0
s Lagothrix_lagothricha.k141_1005387                         33075 26 -     38430 a-gca-tg--------------------a--ccgaagcacag--------------gagctc-----------------at
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544293 26 -  30322482 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_2922                            8676 26 -     24677 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------at
i Lepilemur_ankaranensis.k141_2922                       C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4645 26 -     31569 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------at
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                         22707 26 +     25010 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------at
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      48261 26 +     54090 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------at
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3074390 24 +   3914936 ------c-tg------------------a--gtaga--gcagNNNNNNNNNN----g------------------------
i Leptonychotes_weddellii.KB714746.1                     I 2 C 0
s Lepus_americanus.LepAme_scaffold_57262                     12831 22 -     23961 --------------------------------------------------------tgac--cagtgcagagcaggcag-t
i Lepus_americanus.LepAme_scaffold_57262                 I 386 C 0
s Lipotes_vexillifer.KE559953.1                             299053 17 -    662738 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Lipotes_vexillifer.KE559953.1                          I 2 C 0
s Lophocebus_aterrimus.ctg367                              1464636 26 +   1826925 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2958567                            3742 26 -     22734 A-GTC-TG--------------------A--ATGGAGCAGGA--------------GAGCCT-----------------GT
i Loris_lydekkerianus.k141_2958567                       C 0 C 0
s Loris_tardigradus.ctg83                                  1061170 26 +   6120653 A-GTC-TG--------------------A--ATGGAGCAGGA--------------GAGCCT-----------------GT
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17988032 24 -  59628241 ------c-t--a----------------a--gtgga--gcagNNNNNNNNNN----g------------------------
i Lycaon_pictus.CM007581.1                               I 2 C 0
s Macaca_arctoides.k141_2326796                              32892 26 +     40492 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59702817 26 +  60120075 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_794849                                 7011 26 +      8714 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Macaca_cyclopis.k119_794849                            C 0 C 0
s Macaca_fascicularis.k141_814140                           107445 26 -    114318 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_943731                                  7256 26 +     13165 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Macaca_fuscata.k119_943731                             C 0 C 0
s Macaca_leonina.k141_2438370                                12629 26 -     14632 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Macaca_leonina.k141_2438370                            C 0 C 0
s Macaca_maura.k141_515834                                   12787 26 +     14712 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Macaca_maura.k141_515834                               C 0 C 0
s Macaca_mulatta.NC_041758.1                             186866826 26 + 187317192 A-GTg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25491941 26 -  25927173 A-GTg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_128247                                   20257 26 +     98240 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Macaca_nigra.k141_128247                               C 0 C 0
s Macaca_radiata.k141_3254723                                 5799 26 +     10028 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Macaca_radiata.k141_3254723                            C 0 C 0
s Macaca_siberu.k141_1929020                                  7051 26 -      9047 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Macaca_siberu.k141_1929020                             C 0 C 0
s Macaca_silenus.Contig273                                  358060 26 -    668171 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_596453                                 1432 26 -      5469 a-gcg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Macaca_thibetana.k99_596453                            C 0 C 0
s Macaca_tonkeana.k141_683787                                 7270 26 +      9199 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Macaca_tonkeana.k141_683787                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961712 26 -  24302211 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               377465 26 +    752769 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              40122 24 +    737560 ------t-t--a----------------a--gtgga--acagNNNNNNNNNN----c------------------------
i Manis_javanica.JSZB01003497.1                          I 2 C 0
s Manis_pentadactyla.KN006162.1                              72293 24 -    317179 ------t-t--a----------------a--gtgga--acagNNNNNNNNNN----c------------------------
i Manis_pentadactyla.KN006162.1                          I 2 C 0
s Marmota_marmota.CZRN01000018.1                          33124798  3 -  40650429 -------------------------------------------------------------C-----------------CA
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23209 24 +     74585 ------c-tg------------------a--gtgga--gcagNNNNNNNNNN----a------------------------
i Mellivora_capensis.MelCap_flattened_line_19308         I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 65993 20 +    140813 -----------------------------------------G--------------TCACA------GGAGAGTAACCCAT
i Meriones_unguiculatus.MerUng_scaffold_7390             I 3 C 0
s Mesocricetus_auratus.KB708134.1                         12212294 23 -  29670104 -----------------------------------------G--------------TGACAG---GAGAAGGGTAACCCAT
i Mesocricetus_auratus.KB708134.1                        I 3 C 0
s Mesoplodon_bidens.MesBid_scaffold_74495                     4862 17 -     19186 ----------------------------------ca--acagNNNNNNNNNN----g------------------------
i Mesoplodon_bidens.MesBid_scaffold_74495                I 2 C 0
s Microcebus_murinus.CM007674.1                           18313259 26 -  93316391 A-GTG-TG--------------------A--CTGGAGCAGAG--------------TAGCTT-----------------GT
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_791330                           1583 26 -     13566 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Miopithecus_ogouensis.k141_791330                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        24830 24 +     26817 ------c-tg------------------a--gtaga--gcagNNNNNNNNNN----G------------------------
i Mirounga_angustirostris.MirAng_flattened_line_55178    I 2 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    56790 17 -    437263 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Monodon_monoceros.MonMon_M_scaffold_103                I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  31980 17 +     82753 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Moschus_moschiferus.MosMos_scaffold_13123              I 2 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21376 24 +     63510 ------C-------------------TGT--GTGGA--ACAGNNNNNNNNNN----G------------------------
i Mungos_mungo.MunMun_flattened_line_18455               I 2 C 0
s Mus_pahari.LT608297.1                                   31390769 20 -  89631738 -----------------------------------------A--------------TGACT------GGAGAGTAACCCAT
i Mus_pahari.LT608297.1                                  I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_74954             15304 10 -     17106 ----------------------------------------AA--------------TATCTG-----------------AG
i Muscardinus_avellanarius.MusAve_scaffold_74954         I 2 C 0
s Mustela_putorius.JH418006.1                               330421 24 -  14710649 ------c-tg------------------a--gtgga--gcagNNNNNNNNNN----a------------------------
i Mustela_putorius.JH418006.1                            I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14168 15 -     28317 -----------------------------------agcagag--------------t-gttt---t-------------gt
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 C 0
s Nasalis_larvatus.k141_970469                               18442 26 +     37058 a-gcg-tg--------------------g--ctgacgcacag--------------tgGCTC-----------------AC
i Nasalis_larvatus.k141_970469                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343365 42 +  31847680 ------c-tgtagagcagagaagagcaga--gtaga--gcagNNNNNNNNNN----g------------------------
i Neomonachus_schauinslandi.NINY01007730.1               I 2 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5894842 17 +   7148211 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Neophocaena_asiaeorientalis.KZ687982.1                 I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9181922 24 -   9404916 ------c-t--a----------------a--gtgga--gcagNNNNNNNNNN----g------------------------
i Nyctereutes_procyonoides.CAJHUB010000658.1             I 2 C 0
s Nycticebus_bengalensis.LG01                            102653317 12 - 196305487 A-GTG-TG--------------------A--ATGGA---------------------------------------------
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_921975                              9459 12 +     15238 A-GTG-TG--------------------A--ATGGA---------------------------------------------
i Nycticebus_coucang.k141_921975                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827806 12 + 199412804 A-GTG-TG--------------------A--ATGGA---------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              533933 24 -   2017862 ------c-tg------------------a--gtaga--gcagNNNNNNNNNN----g------------------------
i Odobenus_rosmarus.KB229312.1                           I 2 C 0
s Odocoileus_virginianus.KZ100018.1                         168640 17 +    630418 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Odocoileus_virginianus.KZ100018.1                      I 2 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107521 17 -    150152 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Okapia_johnstoni.LVCL01S0005463.1                      I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25141 23 +    140218 -----------------------------------------G--------------CGACAG---AAGGAGAGTAGCCTGT
i Ondatra_zibethicus.OndZib_scaffold_7387                I 3 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                   12302 20 +     41509 -----------------------------------------A--------------TGATA------GAAGAGTATCCCAT
i Onychomys_torridus.OnyTor_scaffold_28377               I 3 C 0
s Orcinus_orca.KB316932.1                                  2812068 17 -  10937097 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Orcinus_orca.KB316932.1                                I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1702 27 -      4812 a-gtg-ta--------------------a--ctagagcagag--------------tagctt---t-------------gt
i Orycteropus_afer.OryAfe_flattened_line_327065          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190433 22 + 174332312 --------------------------------------------------------tgac--cagtgcagagcaggcag-t
i Oryctolagus_cuniculus.CM000791.1                       I 393 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       494989 24 -    559221 ------c-t--a----------------a--gtgga--gcagNNNNNNNNNN----g------------------------
i Otocyon_megalotis.JAEUCK010005147.1                    I 2 C 0
s Otolemur_crassicaudatus.k141_187572                         4389 22 -      5557 G-GTG-TG--------------------A--TTGGAGCAGGG--------------GAGC---------------------
i Otolemur_crassicaudatus.k141_187572                    C 0 I 15
s Otolemur_garnettii.GL873799.1                             738042 22 -   1103335 G-GTG-TG--------------------A--TTGGAGCAAGG--------------GAGC---------------------
i Otolemur_garnettii.GL873799.1                          C 0 I 15
s Ovis_aries.CM001607.2                                   17617450 17 +  44047080 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Ovis_aries.CM001607.2                                  I 4 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1451 17 -     13921 ----------------------------------ga--acagNNNNNNNNNN----G------------------------
i Ovis_canadensis.OviCan_scaffold_75879                  I 4 C 0
s Pan_paniscus.KQ411608.1                                     3300 24 +     15831 a-g---tg--------------------g--ctgaagcacag--------------tggctc-----------------at
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649114 24 + 189151597 a-g---tg--------------------g--ctgaagcacag--------------tggctc-----------------at
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  181195 13 +    230217 ------c-t--a----------------a--gtgga--gcag---------------------------------------
i Panthera_onca.PanOnc_flattened_line_3271               I 2 I 7
s Panthera_pardus.KV860321.1                                295992 13 +  18783137 ------c-t--a----------------a--gtgga--gcag---------------------------------------
i Panthera_pardus.KV860321.1                             I 2 I 7
s Panthera_tigris.KE722367.1                               4751338 13 -   8748460 ------c-t--a----------------a--gtgga--gcag---------------------------------------
i Panthera_tigris.KE722367.1                             I 2 I 7
s Pantholops_hodgsonii.KE114653.1                          1296368 17 -   2937107 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Pantholops_hodgsonii.KE114653.1                        I 4 C 0
s Papio_anubis.CM001495.2                                183469885 26 + 183742232 A-GCg-tg--------------------g--ctgaagcacag--------------tggctc-----------------at
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_703094                              6223 26 -     17637 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Papio_cynocephalus.k141_703094                         C 0 C 0
s Papio_hamadryas.Contig39                                20592382 26 +  20919399 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  31647 26 +     41871 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_2087334                                    7230 26 -     13745 a-gcg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Papio_papio.k141_2087334                               C 0 C 0
s Papio_ursinus.k141_4818248                                 14730 26 +     25215 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Papio_ursinus.k141_4818248                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42126 24 -     78924 ------c-t------c------------a--gcgga--gcagNNNNNNNNNN----g------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 2 C 0
s Perodicticus_ibeanus.k141_1387561                          11672 26 +     15382 A-GTG-TG--------------------A--CTGGAGCAGGG--------------AAGCTT-----------------GT
i Perodicticus_ibeanus.k141_1387561                      C 0 C 0
s Perodicticus_potto.k141_842195                             18222 26 -     21729 A-GTG-TG--------------------A--CTGGAGCAGGG--------------GAGCTT-----------------GT
i Perodicticus_potto.k141_842195                         C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13466 23 +     28765 A-C-A--G------------------CAA--TTGAAGTCA-----------------GCCCC-----------------AT
i Perognathus_longimembris.PerPac_flattened_line_39705   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18244870 20 -  18517816 -----------------------------------------A--------------TGATA------GAAGAGTATCCCAT
i Peromyscus_maniculatus.KI615324.1                      I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              38771 17 +     63832 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Phocoena_phocoena.PhoPho_flattened_line_24159          I 2 C 0
s Piliocolobus_badius.k141_2704958                           28682 26 -     55023 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AT
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64100 26 +     89929 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AT
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14191 26 -     40849 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AT
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326668 26 -  14605196 A-Gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------at
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                             19483 26 +     26961 a-gcg-tg--------------------a--ccgaagtgcag--------------gagctc-----------------gt
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15496 26 +     23417 a-gcg-tg--------------------a--ccgaagtgcag--------------gagctc-----------------gt
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19477 26 +     29694 a-gcg-tg--------------------a--ccgaagtgcag--------------gagctc-----------------gt
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44512 26 +     52772 a-gcg-tg--------------------a--ccgaagtgcag--------------gagctc-----------------gt
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19503 26 +     26198 a-gcg-tg--------------------a--ccgaagtgcag--------------gagctc-----------------gt
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3955838 26 +   4542175 a-gcg-tg--------------------a--ccgaagtgcag--------------gagctc-----------------gt
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19430 26 -     23490 a-gcg-tg--------------------a--ccgaagtgcag--------------gagctc-----------------gt
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           4939 17 -      7527 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Platanista_gangetica.PlaMin_flattened_line_175331      I 2 C 0
s Plecturocebus_bernhardi.k141_2549090                       22205 25 -     39866 A-GCG-TG--------------------A--CTG-AGCGCAG--------------GAGCTC-----------------GT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        31363 25 +     34906 A-GCG-TG--------------------A--CTG-AGCGCAG--------------GAGCTC-----------------GT
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       35626 25 +     87950 A-GCG-TG--------------------A--CTG-AGCGCAG--------------GAGCTC-----------------GT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     36425 25 +     88961 A-GCG-TG--------------------A--CTG-AGCGCAG--------------GAGCTC-----------------GT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         22118 25 +     39403 A-GCG-TG--------------------A--CTG-AGCGCAG--------------GAGCTC-----------------GT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          35894 25 -     87928 A-GCG-TG--------------------A--CTG-AGCGCAG--------------GAGCTC-----------------GT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         42875 25 +     60166 A-GCG-TG--------------------A--CTG-AGCGCAG--------------GAGCTC-----------------GT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43068 25 +     67232 A-GCG-TG--------------------A--CTG-AGCGCAG--------------GAGCTC-----------------GT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38533 25 +     90634 A-GCG-TG--------------------A--CTG-AGCGCAG--------------GAGCTC-----------------GT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          35916 25 -     89403 A-GCG-TG--------------------A--CTG-AGCGCAG--------------GAGCTC-----------------GT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189181838 24 + 189387572 a-g---tg--------------------g--ctgaagcacag--------------tggctc-----------------at
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9596732 24 +   9816681 a-g---tg--------------------g--ctgaagcacag--------------tggctc-----------------at
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              18267 26 -     69807 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              11629 26 +     80239 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_112514                11535 15 +     16234 ------------------------------------CCACAG--------------CAGTCC----------------TGT
i Procavia_capensis.ProCapCap_scaffold_112514            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2616926 26 -   4620579 A-GTG-TG--------------------A--CTGGAGCAGAG--------------TAGCTC-----------------GT
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1012982 26 +   2598838 A-GTG-TG--------------------A--CTGGAGCAGAG--------------TAGCTC-----------------GT
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_114130                           9050 26 -     19127 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Propithecus_coronatus.k141_114130                      C 0 C 0
s Propithecus_diadema.k141_599139                            10144 26 +     10533 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Propithecus_diadema.k141_599139                        C 0 C 0
s Propithecus_edwardsi.k141_635656                             386 26 +     30655 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_217725                            2578 26 +     14082 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Propithecus_perrieri.k141_217725                       C 0 C 0
s Propithecus_tattersalli.k141_790011                        50263 26 -     67325 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7056 26 -     35169 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036367.1                            19259 20 -     31435 -----------------------------------------G--------------TCACA------GGAGAGTAGCCCAA
i Psammomys_obesus.NESX01036367.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14117 24 +     25061 ------c-tg------------------a--gtgga--gcagNNNNNNNNNN----a------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_42152     I 2 C 0
s Puma_concolor.QAVW01001104.1                            20305794 13 -  38429054 ------c-t--a----------------a--gtgga--gcag---------------------------------------
i Puma_concolor.QAVW01001104.1                           I 2 I 7
s Pygathrix_cinerea.k141_1153803                             40337 26 -     91421 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7634517 26 +   7812017 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             40379 26 -     72585 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31112 17 +     55207 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Rangifer_tarandus.RanTarSib_scaffold_29737             I 2 C 0
s Rattus_norvegicus.chr16                                 53606030 20 +  90668790 -----------------------------------------A--------------TGACT------GGAGAGTGACCCAG
i Rattus_norvegicus.chr16                                I 3 C 0
s Rhinopithecus_bieti.k119_188731                            15585 26 -     21983 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Rhinopithecus_bieti.k119_188731                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91261954 26 - 195417433 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7701045 26 +   7961872 a-gtg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1171 17 -      3450 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Saiga_tatarica.SaiTat_scaffold_455678                  I 4 C 0
s Saimiri_boliviensis.NW_024100920.1                     119968340 26 - 121099817 A-GCA-TG--------------------A--TTGAAGAGCAG--------------TAGCTC-----------------AT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40632 26 +     46362 A-GCA-TG--------------------A--TTGAAAAGCAG--------------TAGCTC-----------------AT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               40692 26 +     45824 A-GCA-TG--------------------A--TTGAAGAGCAG--------------TAGCTC-----------------AT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             57360 26 -     64574 A-GCA-TG--------------------A--TTGAAGAGCAG--------------TAGCTC-----------------AT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                              20454 26 -     23631 A-GCA-TG--------------------A--TTGAAGAGCAG--------------TAGCTC-----------------AT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 40618 26 -     61129 A-GCA-TG--------------------A--TTGAAAAGCAG--------------TAGCTC-----------------AT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5441816 26 -   5703754 G-GCA-TG--------------------A--CTGAAGTGCAG--------------GAGCTC-----------------AC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          72901 26 -     80660 G-GCA-TG--------------------A--CTGAAGTGCAG--------------GAGCTC-----------------AC
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    176938 16 -    313613 ------c-tgta----------------a--gggga--acag--------------a------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 2 I 10
s Semnopithecus_entellus.k141_1705875                         5585 26 +     17286 a-gtg-tg--------------------g--ctgaagcagag--------------tgGCTC-----------------AC
i Semnopithecus_entellus.k141_1705875                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                       5710 26 -     58920 a-gtg-tg--------------------g--ctgaagcagag--------------tgGCTC-----------------AC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                            5618 26 +     45317 a-gtg-tg--------------------g--ctgaagcagag--------------tgGCTC-----------------AC
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_960425                             5731 26 +      9426 a-gtg-tg--------------------g--ctgaagcagag--------------tgGCTC-----------------AC
i Semnopithecus_priam.k141_960425                        C 0 C 0
s Semnopithecus_schistaceus.k141_972136                       5624 26 +     24620 a-gtg-tg--------------------g--ctgaagcagag--------------tgGCTC-----------------AC
i Semnopithecus_schistaceus.k141_972136                  C 0 C 0
s Semnopithecus_vetulus.k141_654052                           1554 26 -      5251 a-gag-tg--------------------g--ctgaagcagag--------------tgGCTC-----------------AC
i Semnopithecus_vetulus.k141_654052                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                     4340 23 -     77746 -----------------------------------------G--------------TGACAA---GAAGAGAGTAGCTCGT
i Sigmodon_hispidus.SigHis_scaffold_20193                I 3 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126              23034 14 +   1910179 ------T-------------------TCA--TTGGA--ACGG--------------T------------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          I 2 C 0
s Spermophilus_dauricus.KZ294078.1                         1975980  3 -   3870691 -------------------------------------------------------------C-----------------CA
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Sorex_araneus.JH798187.1                                13682173 12 -  18376816 ------T-------------------TTG--TGAGA--GCC----------------------------------------
i Sorex_araneus.JH798187.1                               I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             58898 24 +     97271 ------c-t-t-----------------a--gtgga--gcagNNNNNNNNNN----a------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 2 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              47878 23 -    196729 ------c-t--a----------------t--gtgg---acagNNNNNNNNNN----g------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          I 2 C 0
s Sus_scrofa.CM000828.4                                   63022643 26 -  69701581 ------t-tgta----------------a--gtgga--actgNNNNNNNNNN----g------------------------
i Sus_scrofa.CM000828.4                                  I 2 C 0
s Symphalangus_syndactylus.tarseq_199                      1105125 24 -   1523678 a-g---tg--------------------g--ctgaagcacag--------------tggctc-----------------at
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93682 16 +    116680 -----------------------------------agcagag--------------tagctt---t-------------gt
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138505 24 -    156842 ------g-t--a----------------a--gtgga--acagNNNNNNNNNN----g------------------------
i Tapirus_indicus.TapInd_scaffold_9301                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    406977 24 +    539355 ------g-t--a----------------a--gtgga--acagNNNNNNNNNN----g------------------------
i Tapirus_terrestris.TapTer_scaffold_755                 I 2 C 0
s Tarsius_lariang.k141_2201908                               50399 26 +     70052 a-acg-tg--------------------t--cctcagcagaa--------------cagctc-----------------ag
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_722827                               14791 26 +     18080 A-ACG-TG--------------------T--CCTCAGCAGAA--------------CAGCTC-----------------AG
i Tarsius_wallacei.k141_722827                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186466100 26 + 186847797 A-GTg-tg--------------------g--ctgaagcacag--------------tggctc-----------------ac
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_41106                    5642 27 +     27660 G-GGG-TC--------------------A--CAGGAGCAGCG--------------CAGCTT----------------CCT
i Tolypeutes_matacus.TolMat_scaffold_41106               C 0 C 0
s Trachypithecus_auratus.k141_95322                          12100 26 -     15799 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Trachypithecus_auratus.k141_95322                      C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     25467 26 +     78344 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_581431                       12271 26 -     15970 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Trachypithecus_cristatus.k141_581431                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      11233 26 +     62838 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_119873                            12198 26 -     17556 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Trachypithecus_geei.k141_119873                        C 0 C 0
s Trachypithecus_germaini.k141_545543                        12212 26 -     15912 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Trachypithecus_germaini.k141_545543                    C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      11162 26 +     64340 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          12161 26 +     63452 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_283481                   11236 26 +     21341 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Trachypithecus_leucocephalus.k141_283481               C 0 C 0
s Trachypithecus_melamera.k141_261742                         1298 26 +     11697 a-gtg-tg--------------------g--ctgaagcagag--------------tgGCTC-----------------AC
i Trachypithecus_melamera.k141_261742                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                        13079 26 +     33539 a-gtg-tg--------------------g--ctgaagcagag--------------tgGCTC-----------------AC
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5964907 26 +   6242583 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_583962                        12995 26 +     14028 a-gtg-tg--------------------g--ctgaagcacag--------------tgGCTC-----------------AC
i Trachypithecus_pileatus.k141_583962                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                     4805 17 +    200418 ----------------------------------ga--acagNNNNNNNNNN----a------------------------
i Tragulus_javanicus.TraJav_scaffold_3462                I 2 C 0
s Trichechus_manatus.JH594705.1                            4313611 27 +  10818551 A-GCG-TC--------------------A--CAAGGGCAGAG--------------GAGCTT----------------TGT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15765481 17 +  33153633 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Tursiops_truncatus.MRVK01000835.1                      I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     770 16 +     21056 ------C-----------------TGTAA--GCAGG--ACAG--------------A------------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               I 17 I 10
s Ursus_maritimus.KK499267.1                               4878213 24 -   5085361 ------c-tg------------------a--gtgga--gcagNNNNNNNNNN----g------------------------
i Ursus_maritimus.KK499267.1                             I 2 C 0
s Varecia_rubra.k141_590885                                  31616 26 +     50397 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1100575                              6705 26 +     25465 a-gtg-tg--------------------a--ctggagcagag--------------tagctc-----------------gt
i Varecia_variegata.k141_1100575                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5389989 27 -   5488506 ------t-tgt-----------------actggtga--acagNNNNNNNNNN----g------------------------
i Vicugna_pacos.KN270157.1                               I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 42742 24 -     43706 ------c-t--a----------------a--gtgga--gcagNNNNNNNNNN----g------------------------
i Vulpes_lagopus.VulLag_flattened_line_30954             I 2 C 0
s Xerus_inauris.XerIna_scaffold_2302                         24621  3 +    224448 -------------------------------------------------------------C-----------------CA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29807 24 +     86975 ------c-tg------------------a--gtaga--gcagNNNNNNNNNN----g------------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      38770 23 +     63895 -----------------------------------------GNNNNNNNNNNNNNNTGGCGC-----------------AT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 3 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21628 17 -     22999 ----------------------------------ga--acagNNNNNNNNNN----g------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_16896        I 2 C 0
e Erinaceus_europaeus.JH835339.1                           3365133 123 -   7059049 I
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Desmodus_rotundus.KZ672289.1                             8650437  3 +  20541912 I
e Carollia_perspicillata.CarPer_scaffold_737331                421  3 -       918 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                 26946  3 +     43469 I
e Tonatia_saurophila.TonSau_scaffold_294                    103728  3 +    610378 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                31530  0 +     41958 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17424  0 +    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                        389332  0 -   3329780 C
e Pteropus_vampyrus.KN525825.1                             1390053  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              23005967  0 +  28871421 C
e Pteronotus_parnellii.KE854991.1                             1663  0 -     11709 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 162106  0 -    366855 C
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_39861                18895  3 -     30105 I
e Megaderma_lyra.MegLyr_scaffold_4542                        36015  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                 24123  0 +    270270 C
e Hipposideros_galeritus.HipGal_scaffold_65612                9129  0 -     20285 C
e Hipposideros_armiger.JXIK01000431.1                       132216  0 +   1711038 C
e Eidolon_helvum.KE797349.1                                  19343  0 -     31197 C
e Craseonycteris_thonglongyai.CraTho_scaffold_153350           127  2 +      5041 I
e Anoura_caudifer.AnoCau_scaffold_1412                      209496  3 +    412891 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11134 3 +     36723 GA-A
s Acinonyx_jubatus.LLWD01001279.1                           836412 2 +   1699592 -a-a
i Acinonyx_jubatus.LLWD01001279.1                        I 7 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     10679 3 -     63021 GT-A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538347 2 -  29979442 -a-a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            107798 2 -    347723 -a-a
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 1
s Allactaga_bullata.AllBul_scaffold_20030                     1359 3 +     61208 AA-A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   40696 3 -     52922 ga-a
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          7018 3 +     11307 GA-A
i Allochrocebus_lhoesti.k141_1932296                     C 0 C 0
s Allochrocebus_preussi.k141_499905                           7190 3 -     13300 ga-a
i Allochrocebus_preussi.k141_499905                      C 0 C 0
s Allochrocebus_solatus.k141_139760                           9071 3 +     12926 ga-a
i Allochrocebus_solatus.k141_139760                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             31735 3 +     51355 ga-a
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               24881 3 -     36483 ga-a
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              6986 3 -     13496 ga-a
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23768 3 +     27940 GA-A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15576 3 -     39310 GA-A
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            23834 3 +     30492 ga-a
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28065 3 +     47717 ga-a
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_2029433                            79037 3 +     87306 ga-a
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             39019 3 +     50774 GA-A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707751 2 -   2318259 -a-a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303             26981 2 -     32520 -a-a
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_2596348                                   5267 3 +     12024 ga-a
i Aotus_azarae.k141_2596348                              C 0 C 0
s Aotus_griseimembra.k141_2227177                             4933 3 -     10972 ga-a
i Aotus_griseimembra.k141_2227177                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4333394 3 -   5030052 GA-A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_1801223                              5326 3 -     12698 ga-a
i Aotus_trivirgatus.k141_1801223                         C 0 C 0
s Aotus_vociferans.k141_506037                                4786 3 -     11998 ga-a
i Aotus_vociferans.k141_506037                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22177 3 +     39421 ac-a
i Aplodontia_rufa.AprRuf_scaffold_37633                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       14275 3 +     45910 GA-A
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21232030 3 -  21539123 ga-a
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3102 3 -     48076 ga-a
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18568 3 -     22344 ga-a
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31624 3 -     89868 ga-a
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36037 3 -     40414 ga-a
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                43871 3 +     72325 ga-a
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75626 3 -     92717 ga-a
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              76209 3 +     85213 ga-a
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222410 2 +  23207421 -a-a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4413 2 +     25979 -a-a
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     12809 2 -    124022 -A-A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                    232987 2 -    288883 -a-a
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20306362 2 +  48749331 -a-a
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1159464 2 -   1948126 -a-a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18116574 2 +  45695690 -a-a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2851413 2 +   4408762 -a-a
i Bubalus_bubalis.KI419123.1                             C 0 I 616
s Cacajao_ayresi.k141_552049                                116894 3 -    122966 GA-A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76372 3 +     81800 GA-A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45577 3 -     95584 GA-A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69672 3 -    119600 ga-a
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020403 2 -  17673402 -a-a
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2353233 2 -   7040546 -a-a
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  421492 2 -   1652518 -a-a
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17831689 2 -  60362399 -a-a
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32433 2 -     43241 -a-a
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067157 2 -   9314153 -a-a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17991816 2 -  59632846 -a-a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18532922 2 +  63665305 -a-a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18861814 2 +  46296322 -a-a
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18092532 2 -  44709034 -A-A
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           179848 3 -    496798 GA-A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    167078 3 +    179628 GA-A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                    113365 2 +    217609 -a-a
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebus_albifrons.Contig27                                25675516 3 +  26074798 ga-g
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               21984 3 +     28840 ga-g
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7655 3 +     13997 ga-g
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29773 3 +     31688 GA-A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12257196 2 +  27778364 -a-a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          2903 2 +     15641 -a-a
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4501670 3 +   4669795 ga-a
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_2766003                       22942 3 -     30935 GA-A
i Cercocebus_chrysogaster.k141_2766003                   C 0 C 0
s Cercocebus_lunulatus.k141_245046                            7344 3 +     18174 GA-A
i Cercocebus_lunulatus.k141_245046                       C 0 C 0
s Cercocebus_torquatus.k141_4063387                           7181 3 +     18249 GA-A
i Cercocebus_torquatus.k141_4063387                      C 0 C 0
s Cercopithecus_ascanius.k141_4281816                         2300 3 -      5884 GA-A
i Cercopithecus_ascanius.k141_4281816                    C 0 C 0
s Cercopithecus_cephus.k141_1630443                           1324 3 +      4620 GA-A
i Cercopithecus_cephus.k141_1630443                      C 0 C 0
s Cercopithecus_diana.k141_488174                             7760 3 +     10982 GA-A
i Cercopithecus_diana.k141_488174                        C 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1306 3 +      4810 GA-A
i Cercopithecus_hamlyni.k141_1302205                     C 0 C 0
s Cercopithecus_lowei.k141_4082698                            7222 3 +     34178 ga-a
i Cercopithecus_lowei.k141_4082698                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38849332 3 +  39242232 ga-a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21252932 3 -  21565898 GA-A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_557928                         7388 3 -     18401 GA-A
i Cercopithecus_neglectus.k141_557928                    C 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7451 3 -     15013 GA-A
i Cercopithecus_nictitans.k141_1200139                   C 0 C 0
s Cercopithecus_petaurista.k141_365908                        7422 3 +     11214 GA-A
i Cercopithecus_petaurista.k141_365908                   C 0 C 0
s Cercopithecus_pogonias.k141_391400                          2242 3 -     13831 GA-A
i Cercopithecus_pogonias.k141_391400                     C 0 C 0
s Cercopithecus_roloway.k141_1248991                         27416 3 +     68532 ga-a
i Cercopithecus_roloway.k141_1248991                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             489 3 -      1897 GA-C
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       C 0 C 0
s Cheirogaleus_major.k141_333249                             43615 3 -     52598 ga-a
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           38948 3 +     57038 ga-a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Cheracebus_lucifer.k141_49986                               9792 3 -     17098 GA-A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9662 3 +     17877 GA-A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167229 3 -    216457 ga-a
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71702 3 +     76511 GA-A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          113919 3 +    146308 ga-a
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          45827 3 -     50570 GA-A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455200 3 -  18827391 aa-a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41143 3 -     50209 ga-a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448125 3 + 135778131 ga-a
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   695 3 -     25429 GA-A
i Choloepus_didactylus.ChoDid_scaffold_22546             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            195823 3 +    839153 ga-a
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               6530 3 -      9651 ga-g
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          C 0 C 0
s Colobus_angolensis.KN981557.1                            1936066 3 +   2368649 ga-a
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199970044 3 + 200372422 ga-a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              58358 3 +     84244 GA-A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17566272 2 -  53390261 -A-A
i Condylura_cristata.JH655891.1                          I 10 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 16582 3 +     83289 GA-A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11697214 3 + 224834208 GA-A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59134 2 -     87169 -a-a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            92291 3 +   2246927 GG-G
i Dasypus_novemcinctus.JH564415.1                        I 1 C 0
s Daubentonia_madagascariensis.ctg71                      12562387 3 -  12879189 ga-a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16841561 2 +  35494412 -a-a
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  698991 2 +   1390856 -a-a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                   31794 2 +    198055 -a-a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18914616 3 +  37912305 AA-A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_47531                  13214 3 -     26976 AA-A
i Dipodomys_stephensi.DipSte_scaffold_47531              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       341988 2 +    607251 -a-a
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          47610 3 -    110024 GA-A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01050844.1                            8863 3 +     12610 GA-A
i Ellobius_talpinus.LOJH01050844.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16365694 2 -  41312741 -a-a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1310300 2 +   4378816 -a-a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18557768 2 -  39960074 -a-a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               59809 2 +    498745 -a-a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21237406 3 -  21539334 ga-a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           40743 2 +    133382 -a-a
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5036 2 -     25849 -a-a
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_1869827                             12734 3 -     21348 ga-a
i Eulemur_albifrons.k141_1869827                         C 0 C 0
s Eulemur_collaris.k141_601111                                9936 3 +     70999 ga-a
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                               7675 3 -    112731 ga-a
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                              6685 3 -     68309 ga-a
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_2627385                                 3821 3 -      9374 ga-a
i Eulemur_fulvus.k141_2627385                            C 0 C 0
s Eulemur_macaco.k141_1562045                                32916 3 +     75513 ga-a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 30800 3 +     97555 ga-a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            7456 3 -     30972 ga-a
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_1120150                                  7333 3 +     16616 ga-a
i Eulemur_rufus.k141_1120150                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              33918 3 +    111500 ga-a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20267566 2 + 206538554 -a-a
i Felis_catus.CM001381.2                                 I 7 C 0
s Felis_catus_fca126.CM031415.1                           20226344 2 + 205367284 -a-a
i Felis_catus_fca126.CM031415.1                          I 7 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  3354 2 -     25330 -A-A
i Felis_nigripes.FelNig_flattened_line_44075             I 7 C 0
s Galeopterus_variegatus.GalVar_scaffold_75343               15813 3 -     17176 aa-a
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     636845 2 -    660261 -a-a
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_149316                            5006 3 +      8016 GA-A
i Glis_glis.GliGli_scaffold_149316                       C 0 C 0
s Gorilla_beringei.k141_179627                                 901 3 +      1068 ga-a
i Gorilla_beringei.k141_179627                           C 0 C 0
s Gorilla_gorilla.LT578341.1                             186365015 3 + 186649187 ga-a
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   54757 3 +     78134 ga-a
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                           7330 3 +     40692 ga-a
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_435261                             17018 3 +     22537 ga-a
i Hapalemur_gilberti.k141_435261                         C 0 C 0
s Hapalemur_griseus.k141_679418                              15665 3 -     28566 ga-a
i Hapalemur_griseus.k141_679418                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         14397 3 +     42923 ga-a
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17652 3 +     53142 ga-a
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               272820 2 +    327341 -A-A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14534 2 -     48891 -a-a
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10233 3 -     15841 GA-A
i Heterohyrax_brucei.HetBruBak_scaffold_90013            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6431 2 +     36432 -a-a
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hoolock_leuconedys.ctg274                                    460431 3 +    630532 ga-a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   8501 2 -     22022 -A-A
i Hyaena_hyaena.HyaHya_flattened_line_62789              C 0 C 0
s Hylobates_agilis.k141_967383                                1700 3 -      4846 GA-A
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                158 3 -      8919 GA-A
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555129 3 - 191637585 ga-a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3348016 3 -  11177569 ga-a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543734 3 -   7955117 AC-A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_1997670                                    2157 3 +      8453 ga-a
i Indri_indri.k141_1997670                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29153 2 -     31341 -a-a
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8298624 3 -   9596543 GA-A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                  4904 2 +     97402 -a-a
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         33101 3 -     38430 ga-a
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544319 3 -  30322482 ga-a
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_2922                            8702 3 -     24677 ga-a
i Lepilemur_ankaranensis.k141_2922                       C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4671 3 -     31569 ga-a
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                         22733 3 +     25010 ga-a
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      48287 3 +     54090 ga-a
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3074414 2 +   3914936 -a-a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_57262                     12853 3 -     23961 ga-a
i Lepus_americanus.LepAme_scaffold_57262                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             299070 2 -    662738 -a-a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1464662 3 +   1826925 AA-A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2958567                            3768 3 -     22734 GA-A
i Loris_lydekkerianus.k141_2958567                       C 0 C 0
s Loris_tardigradus.ctg83                                  1061196 3 +   6120653 GA-A
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17988056 2 -  59628241 -a-a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              32918 3 +     40492 GA-A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59702843 3 +  60120075 GA-A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_794849                                 7037 3 +      8714 GA-A
i Macaca_cyclopis.k119_794849                            C 0 C 0
s Macaca_fascicularis.k141_814140                           107471 3 -    114318 GA-A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_943731                                  7282 3 +     13165 GA-A
i Macaca_fuscata.k119_943731                             C 0 C 0
s Macaca_leonina.k141_2438370                                12655 3 -     14632 GA-A
i Macaca_leonina.k141_2438370                            C 0 C 0
s Macaca_maura.k141_515834                                   12813 3 +     14712 GA-A
i Macaca_maura.k141_515834                               C 0 C 0
s Macaca_mulatta.NC_041758.1                             186866852 3 + 187317192 ga-a
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25491967 3 -  25927173 ga-a
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_128247                                   20283 3 +     98240 GA-A
i Macaca_nigra.k141_128247                               C 0 C 0
s Macaca_radiata.k141_3254723                                 5825 3 +     10028 GA-A
i Macaca_radiata.k141_3254723                            C 0 C 0
s Macaca_siberu.k141_1929020                                  7077 3 -      9047 GA-A
i Macaca_siberu.k141_1929020                             C 0 C 0
s Macaca_silenus.Contig273                                  358086 3 -    668171 GA-A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_596453                                 1458 3 -      5469 GA-A
i Macaca_thibetana.k99_596453                            C 0 C 0
s Macaca_tonkeana.k141_683787                                 7296 3 +      9199 GA-A
i Macaca_tonkeana.k141_683787                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961738 3 -  24302211 ga-a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               377491 3 +    752769 ga-a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              40146 2 +    737560 -a-a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              72317 2 -    317179 -a-a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33124801 3 -  40650429 AC-A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23233 2 +     74585 -a-a
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 66013 1 +    140813 G---
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12212317 3 -  29670104 GA-A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_74495                     4879 2 -     19186 -a-a
i Mesoplodon_bidens.MesBid_scaffold_74495                C 0 C 0
s Microcebus_murinus.CM007674.1                           18313285 3 -  93316391 GA-A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_791330                           1609 3 -     13566 ga-a
i Miopithecus_ogouensis.k141_791330                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        24854 2 +     26817 -A-A
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    56807 2 -    437263 -a-a
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  31997 2 +     82753 -a-a
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21400 2 +     63510 -A-A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mus_pahari.LT608297.1                                   31390789 3 -  89631738 GT-A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_74954             15314 3 -     17106 GA-A
i Muscardinus_avellanarius.MusAve_scaffold_74954         C 0 C 0
s Mustela_putorius.JH418006.1                               330445 2 -  14710649 -a-a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14183 3 -     28317 ga-a
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 C 0
s Nasalis_larvatus.k141_970469                               18468 3 +     37058 AA-A
i Nasalis_larvatus.k141_970469                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343407 2 +  31847680 -a-a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5894859 2 +   7148211 -a-a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9181946 2 -   9404916 -a-a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Odobenus_rosmarus.KB229312.1                              533957 2 -   2017862 -a-a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         168657 2 +    630418 -a-a
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107538 2 -    150152 -a-a
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25164 3 +    140218 GA-A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                   12322 3 +     41509 AA-A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  2812085 2 -  10937097 -a-a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1729 3 -      4812 ga-a
i Orycteropus_afer.OryAfe_flattened_line_327065          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190455 3 + 174332312 ga-a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       495013 2 -    559221 -a-a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17617467 2 +  44047080 -a-a
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1468 2 -     13921 -A-A
i Ovis_canadensis.OviCan_scaffold_75879                  C 0 C 0
s Pan_paniscus.KQ411608.1                                     3324 3 +     15831 ga-a
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649138 3 + 189151597 ga-a
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  181215 2 +    230217 -a-a
i Panthera_onca.PanOnc_flattened_line_3271               I 7 C 0
s Panthera_pardus.KV860321.1                                296012 2 +  18783137 -a-a
i Panthera_pardus.KV860321.1                             I 7 C 0
s Panthera_tigris.KE722367.1                               4751358 2 -   8748460 -a-a
i Panthera_tigris.KE722367.1                             I 7 C 0
s Pantholops_hodgsonii.KE114653.1                          1296385 2 -   2937107 -a-a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183469911 3 + 183742232 ga-a
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_703094                              6249 3 -     17637 aa-a
i Papio_cynocephalus.k141_703094                         C 0 C 0
s Papio_hamadryas.Contig39                                20592408 3 +  20919399 aa-a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  31673 3 +     41871 aa-a
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_2087334                                    7256 3 -     13745 GA-A
i Papio_papio.k141_2087334                               C 0 C 0
s Papio_ursinus.k141_4818248                                 14756 3 +     25215 GA-A
i Papio_ursinus.k141_4818248                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42150 2 -     78924 -a-t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1387561                          11698 3 +     15382 GA-A
i Perodicticus_ibeanus.k141_1387561                      C 0 C 0
s Perodicticus_potto.k141_842195                             18248 3 -     21729 GA-A
i Perodicticus_potto.k141_842195                         C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13489 3 +     28765 GA-A
i Perognathus_longimembris.PerPac_flattened_line_39705   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18244890 4 -  18517816 AAAA
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              38788 2 +     63832 -a-a
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                           28708 3 -     55023 GA-A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64126 3 +     89929 GA-A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14217 3 -     40849 GA-A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326694 3 -  14605196 ga-a
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                             19509 3 +     26961 ga-g
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15522 3 +     23417 ga-g
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19503 3 +     29694 ga-g
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44538 3 +     52772 ga-g
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19529 3 +     26198 ga-g
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3955864 3 +   4542175 ga-g
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19456 3 -     23490 ga-g
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           4956 2 -      7527 -a-a
i Platanista_gangetica.PlaMin_flattened_line_175331      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       22230 3 -     39866 GA-A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        31388 3 +     34906 GA-A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       35651 3 +     87950 GA-A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     36450 3 +     88961 CA-A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         22143 3 +     39403 GA-A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          35919 3 -     87928 GA-A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         42900 3 +     60166 GA-A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43093 3 +     67232 GA-A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38558 3 +     90634 GA-A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          35941 3 -     89403 GA-A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189181862 3 + 189387572 ga-a
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9596756 3 +   9816681 ga-a
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              18293 3 -     69807 AA-A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              11655 3 +     80239 aa-a
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_112514                11550 3 +     16234 GA-A
i Procavia_capensis.ProCapCap_scaffold_112514            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2616952 3 -   4620579 GA-A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1013008 3 +   2598838 GA-A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_114130                           9076 3 -     19127 ga-a
i Propithecus_coronatus.k141_114130                      C 0 C 0
s Propithecus_diadema.k141_599139                            10170 3 +     10533 ga-a
i Propithecus_diadema.k141_599139                        C 0 C 0
s Propithecus_edwardsi.k141_635656                             412 3 +     30655 ga-a
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_217725                            2604 3 +     14082 ga-a
i Propithecus_perrieri.k141_217725                       C 0 C 0
s Propithecus_tattersalli.k141_790011                        50289 3 -     67325 ga-a
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7082 3 -     35169 ga-a
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036367.1                            19279 1 -     31435 G---
i Psammomys_obesus.NESX01036367.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14141 2 +     25061 -a-a
i Pteronura_brasiliensis.PteBra_flattened_line_42152     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20305814 2 -  38429054 -a-a
i Puma_concolor.QAVW01001104.1                           I 7 C 0
s Pygathrix_cinerea.k141_1153803                             40363 3 -     91421 aa-a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7634543 3 +   7812017 AA-A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             40405 3 -     72585 aa-a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31129 2 +     55207 -a-a
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53606050 3 +  90668790 GT-A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_188731                            15611 3 -     21983 AA-A
i Rhinopithecus_bieti.k119_188731                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91261980 3 - 195417433 aa-a
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7701071 3 +   7961872 aa-a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1188 2 -      3450 -a-a
i Saiga_tatarica.SaiTat_scaffold_455678                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119968366 3 - 121099817 GA-A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40658 3 +     46362 GA-A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               40718 3 +     45824 GA-A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             57386 3 -     64574 GA-A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                              20480 3 -     23631 GA-A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 40644 3 -     61129 GA-A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5441842 3 -   5703754 GA-A
i Sapajus_apella.ctg103                                  C 0 I 1
s Sapajus_macrocephalus.k141_351809                          72927 3 -     80660 GA-A
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    176964 2 -    313613 -a-a
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 10 C 0
s Semnopithecus_entellus.k141_1705875                         5611 3 +     17286 AA-A
i Semnopithecus_entellus.k141_1705875                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                       5736 3 -     58920 AA-A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                            5644 3 +     45317 AA-A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_960425                             5757 3 +      9426 AA-A
i Semnopithecus_priam.k141_960425                        C 0 C 0
s Semnopithecus_schistaceus.k141_972136                       5650 3 +     24620 AA-A
i Semnopithecus_schistaceus.k141_972136                  C 0 C 0
s Semnopithecus_vetulus.k141_654052                           1580 3 -      5251 AA-A
i Semnopithecus_vetulus.k141_654052                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                     4363 3 -     77746 GA-A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126              23048 2 +   1910179 -G-A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1975983 3 -   3870691 AC-A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             58922 2 +     97271 -a-a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              47901 2 -    196729 -a-a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   63022669 2 -  69701581 -a-a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1105149 3 -   1523678 ga-a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93698 3 +    116680 ga-a
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138529 2 -    156842 -a-a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    407001 2 +    539355 -a-a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               50425 3 +     70052 ga-a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_722827                               14817 3 +     18080 GA-A
i Tarsius_wallacei.k141_722827                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186466126 3 + 186847797 ga-a
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_41106                    5669 3 +     27660 GA-A
i Tolypeutes_matacus.TolMat_scaffold_41106               C 0 C 0
s Trachypithecus_auratus.k141_95322                          12126 3 -     15799 AA-A
i Trachypithecus_auratus.k141_95322                      C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     25493 3 +     78344 AA-A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_581431                       12297 3 -     15970 AA-A
i Trachypithecus_cristatus.k141_581431                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      11259 3 +     62838 AA-A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_119873                            12224 3 -     17556 AA-A
i Trachypithecus_geei.k141_119873                        C 0 C 0
s Trachypithecus_germaini.k141_545543                        12238 3 -     15912 AA-A
i Trachypithecus_germaini.k141_545543                    C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      11188 3 +     64340 AA-A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          12187 3 +     63452 AA-A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_283481                   11262 3 +     21341 AA-A
i Trachypithecus_leucocephalus.k141_283481               C 0 C 0
s Trachypithecus_melamera.k141_261742                         1324 3 +     11697 AA-A
i Trachypithecus_melamera.k141_261742                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                        13105 3 +     33539 AA-A
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5964933 3 +   6242583 AA-A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_583962                        13021 3 +     14028 AA-A
i Trachypithecus_pileatus.k141_583962                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                     4822 2 +    200418 -a-a
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            4313638 3 +  10818551 GA-A
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15765498 2 +  33153633 -a-a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     796 2 +     21056 -a-a
i Uropsilus_gracilis.UroGra_scaffold_46687               I 10 C 0
s Ursus_maritimus.KK499267.1                               4878237 2 -   5085361 -a-a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  31642 3 +     50397 ga-a
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1100575                              6731 3 +     25465 ga-a
i Varecia_variegata.k141_1100575                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5390016 2 -   5488506 -a-a
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 42766 2 -     43706 -a-a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                         24624 3 +    224448 AA-C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29831 2 +     86975 -a-a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      38793 3 +     63895 GA-C
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21645 2 -     22999 -a-a
i Ziphius_cavirostris.ZipCav_flattened_line_16896        C 0 C 0
e Sorex_araneus.JH798187.1                                13682185 0 -  18376816 C
e Erinaceus_europaeus.JH835339.1                           3365133 123 -   7059049 I
e Crocidura_indochinensis.CroInd_scaffold_123729              8611 0 -      9007 C
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Desmodus_rotundus.KZ672289.1                             8650437 3 +  20541912 I
e Otolemur_garnettii.GL873799.1                             738064 15 -   1103335 I
e Otolemur_crassicaudatus.k141_187572                         4411 15 -      5557 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827818 0 + 199412804 C
e Nycticebus_coucang.k141_921975                              9471 0 +     15238 C
e Nycticebus_bengalensis.LG01                            102653329 0 - 196305487 C
e Galagoides_demidoff.k141_1153324                           11777 0 +     12379 C
e Galago_senegalensis.k141_991736                             1874 15 -     22493 I
e Galago_moholi.ctg3793                                        758 15 +    137831 I
e Carollia_perspicillata.CarPer_scaffold_737331                421 3 -       918 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                 26946 3 +     43469 I
e Tonatia_saurophila.TonSau_scaffold_294                    103728 3 +    610378 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                31530 0 +     41958 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17424 0 +    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                        389332 0 -   3329780 C
e Pteropus_vampyrus.KN525825.1                             1390053 0 +   4952924 C
e Pteropus_alecto.KB030862.1                              23005967 0 +  28871421 C
e Pteronotus_parnellii.KE854991.1                             1663 0 -     11709 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 162106 0 -    366855 C
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_39861                18895 3 -     30105 I
e Megaderma_lyra.MegLyr_scaffold_4542                        36015 0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                 24123 0 +    270270 C
e Hipposideros_galeritus.HipGal_scaffold_65612                9129 0 -     20285 C
e Hipposideros_armiger.JXIK01000431.1                       132216 0 +   1711038 C
e Eidolon_helvum.KE797349.1                                  19343 0 -     31197 C
e Craseonycteris_thonglongyai.CraTho_scaffold_153350           127 2 +      5041 I
e Anoura_caudifer.AnoCau_scaffold_1412                      209496 3 +    412891 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11137 3 +     36723 A-----G--A
s Acinonyx_jubatus.LLWD01001279.1                           836414 3 +   1699592 a-----g--t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     10682 3 -     63021 A-----G--A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538349 3 -  29979442 a-----g--a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            107801 1 -    347723 ---------a
i Ailurus_fulgens.LNAC01001112.1                         I 1 C 0
s Allactaga_bullata.AllBul_scaffold_20030                     1362 3 +     61208 A-----G--A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   40699 3 -     52922 a-----g--a
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          7021 3 +     11307 A-----G--A
i Allochrocebus_lhoesti.k141_1932296                     C 0 C 0
s Allochrocebus_preussi.k141_499905                           7193 3 -     13300 a-----g--a
i Allochrocebus_preussi.k141_499905                      C 0 C 0
s Allochrocebus_solatus.k141_139760                           9074 3 +     12926 a-----g--a
i Allochrocebus_solatus.k141_139760                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             31738 3 +     51355 a-----g--g
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               24884 3 -     36483 a-----g--g
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              6989 3 -     13496 a-----g--g
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23771 3 +     27940 A-----T--G
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15579 3 -     39310 A-----G--G
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            23837 3 +     30492 a-----g--g
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28068 3 +     47717 a-----g--g
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_2029433                            79040 3 +     87306 a-----t--g
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             39022 3 +     50774 A-----T--G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707753 3 -   2318259 a-----g--g
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303             26983 3 -     32520 a-----g--g
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_2596348                                   5270 3 +     12024 a-----g--g
i Aotus_azarae.k141_2596348                              C 0 C 0
s Aotus_griseimembra.k141_2227177                             4936 3 -     10972 a-----g--g
i Aotus_griseimembra.k141_2227177                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4333397 3 -   5030052 A-----G--G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_1801223                              5329 3 -     12698 a-----g--g
i Aotus_trivirgatus.k141_1801223                         C 0 C 0
s Aotus_vociferans.k141_506037                                4789 3 -     11998 a-----g--g
i Aotus_vociferans.k141_506037                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22180 3 +     39421 g-----g--a
i Aplodontia_rufa.AprRuf_scaffold_37633                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       14278 3 +     45910 A-----A--G
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21232033 3 -  21539123 a-----g--g
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3105 3 -     48076 a-----g--g
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18571 3 -     22344 a-----g--g
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31627 3 -     89868 a-----g--g
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36040 3 -     40414 a-----g--g
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                43874 3 +     72325 a-----g--g
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75629 3 -     92717 a-----g--a
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              76212 3 +     85213 a-----g--a
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222412 3 +  23207421 a-----g--g
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4415 3 +     25979 a-----g--g
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     12811 3 -    124022 A-----G--G
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                    232989 3 -    288883 a-----g--g
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20306364 3 +  48749331 a-----g--g
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1159466 3 -   1948126 a-----g--g
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18116576 3 +  45695690 a-----g--g
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2852031 3 +   4408762 A-----G--G
i Bubalus_bubalis.KI419123.1                             I 616 C 0
s Cacajao_ayresi.k141_552049                                116897 3 -    122966 C-----G--G
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76375 3 +     81800 C-----G--G
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45580 3 -     95584 C-----G--G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69675 3 -    119600 c-----g--g
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020405 3 -  17673402 a-----a--g
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2353235 3 -   7040546 a-----a--g
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  421494 3 -   1652518 a-----a--g
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17831691 3 -  60362399 a-----g--a
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32435 3 -     43241 a-----g--a
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067159 3 -   9314153 a-----g--a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17991818 3 -  59632846 a-----g--a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18532924 3 +  63665305 a-----g--a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18861816 3 +  46296322 a-----G--G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18092534 3 -  44709034 A-----G--G
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           179851 3 -    496798 A-----G--G
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    167081 3 +    179628 A-----G--A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                    113367 3 +    217609 a-----g--g
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebus_albifrons.Contig27                                25675519 3 +  26074798 a-----g--g
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               21987 3 +     28840 a-----g--g
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7658 3 +     13997 a-----g--g
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29776 3 +     31688 A-----G--A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12257198 3 +  27778364 a-----g--a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          2905 3 +     15641 a-----g--a
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4501673 3 +   4669795 a-----G--A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_2766003                       22945 3 -     30935 A-----G--A
i Cercocebus_chrysogaster.k141_2766003                   C 0 C 0
s Cercocebus_lunulatus.k141_245046                            7347 3 +     18174 A-----G--A
i Cercocebus_lunulatus.k141_245046                       C 0 C 0
s Cercocebus_torquatus.k141_4063387                           7184 3 +     18249 A-----G--A
i Cercocebus_torquatus.k141_4063387                      C 0 C 0
s Cercopithecus_ascanius.k141_4281816                         2303 3 -      5884 A-----G--A
i Cercopithecus_ascanius.k141_4281816                    C 0 C 0
s Cercopithecus_cephus.k141_1630443                           1327 3 +      4620 A-----G--A
i Cercopithecus_cephus.k141_1630443                      C 0 C 0
s Cercopithecus_diana.k141_488174                             7763 3 +     10982 A-----G--A
i Cercopithecus_diana.k141_488174                        C 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1309 3 +      4810 A-----G--A
i Cercopithecus_hamlyni.k141_1302205                     C 0 C 0
s Cercopithecus_lowei.k141_4082698                            7225 3 +     34178 a-----g--a
i Cercopithecus_lowei.k141_4082698                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38849335 3 +  39242232 a-----g--a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21252935 3 -  21565898 A-----G--A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_557928                         7391 3 -     18401 A-----G--A
i Cercopithecus_neglectus.k141_557928                    C 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7454 3 -     15013 A-----G--A
i Cercopithecus_nictitans.k141_1200139                   C 0 C 0
s Cercopithecus_petaurista.k141_365908                        7425 3 +     11214 A-----G--A
i Cercopithecus_petaurista.k141_365908                   C 0 C 0
s Cercopithecus_pogonias.k141_391400                          2245 3 -     13831 A-----G--A
i Cercopithecus_pogonias.k141_391400                     C 0 C 0
s Cercopithecus_roloway.k141_1248991                         27419 3 +     68532 a-----g--a
i Cercopithecus_roloway.k141_1248991                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             492 1 -      1897 A---------
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       C 0 C 0
s Cheirogaleus_major.k141_333249                             43618 5 -     52598 a-----gata
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           38951 3 +     57038 a-----g--a
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Cheracebus_lucifer.k141_49986                               9795 3 -     17098 A-----G--G
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9665 3 +     17877 A-----G--G
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167232 3 -    216457 a-----g--g
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71705 3 +     76511 A-----G--G
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          113922 3 +    146308 c-----g--g
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          45830 3 -     50570 C-----G--G
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455203 3 -  18827391 a-----g--a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41146 3 -     50209 a-----g--a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448128 3 + 135778131 a-----G--A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   698 1 -     25429 A---------
i Choloepus_didactylus.ChoDid_scaffold_22546             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            195826 1 +    839153 a---------
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               6533 1 -      9651 g---------
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          C 0 C 0
s Colobus_angolensis.KN981557.1                            1936069 3 +   2368649 a-----G--A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199970047 3 + 200372422 a-----g--a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              58361 3 +     84244 A-----G--A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17566274 3 -  53390261 A-----G--A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 16585 3 +     83289 A-----T--A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11697217 3 + 224834208 A-----G--G
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_123729              8611 6 -      9007 T--TGTT--T
i Crocidura_indochinensis.CroInd_scaffold_123729         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59136 3 -     87169 g-----g--a
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            92294 1 +   2246927 A---------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12562390 3 -  12879189 a-----a--a
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16841563 3 +  35494412 a-----g--g
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  698993 3 +   1390856 a-----g--a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                   31796 3 +    198055 a-----g--a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18914619 3 +  37912305 A-----G--A
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_47531                  13217 3 -     26976 A-----G--A
i Dipodomys_stephensi.DipSte_scaffold_47531              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       341990 3 +    607251 a-----g--g
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          47613 3 -    110024 A-----A--a
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01050844.1                            8866 3 +     12610 A-----A--A
i Ellobius_talpinus.LOJH01050844.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16365696 3 -  41312741 a-----g--a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1310302 3 +   4378816 a-----g--a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18557770 3 -  39960074 a-----g--a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               59811 3 +    498745 a-----g--a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21237409 3 -  21539334 a-----g--a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           40745 3 +    133382 a-----g--g
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5038 3 -     25849 a-----g--g
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_1869827                             12737 3 -     21348 a-----g--a
i Eulemur_albifrons.k141_1869827                         C 0 C 0
s Eulemur_collaris.k141_601111                                9939 3 +     70999 a-----g--a
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                               7678 3 -    112731 a-----g--a
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                              6688 3 -     68309 a-----g--a
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_2627385                                 3824 3 -      9374 a-----g--a
i Eulemur_fulvus.k141_2627385                            C 0 C 0
s Eulemur_macaco.k141_1562045                                32919 3 +     75513 a-----g--a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 30803 3 +     97555 a-----g--a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            7459 3 -     30972 a-----g--a
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_1120150                                  7336 3 +     16616 a-----g--a
i Eulemur_rufus.k141_1120150                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              33921 3 +    111500 a-----g--a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20267568 3 + 206538554 a-----g--t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20226346 3 + 205367284 a-----g--t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  3356 3 -     25330 A-----G--T
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_75343               15816 3 -     17176 a-----g--a
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     636847 3 -    660261 a-----g--g
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_149316                            5009 3 +      8016 A-----G--A
i Glis_glis.GliGli_scaffold_149316                       C 0 C 0
s Gorilla_beringei.k141_179627                                 904 3 +      1068 a-----g--a
i Gorilla_beringei.k141_179627                           C 0 C 0
s Gorilla_gorilla.LT578341.1                             186365018 3 + 186649187 a-----G--A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   54760 3 +     78134 a-----a--a
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                           7333 3 +     40692 a-----g--a
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_435261                             17021 3 +     22537 a-----g--a
i Hapalemur_gilberti.k141_435261                         C 0 C 0
s Hapalemur_griseus.k141_679418                              15668 3 -     28566 a-----g--a
i Hapalemur_griseus.k141_679418                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         14400 3 +     42923 a-----g--a
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17655 3 +     53142 a-----g--a
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               272822 3 +    327341 A-----G--A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14536 3 -     48891 a-----g--g
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10236 1 -     15841 G---------
i Heterohyrax_brucei.HetBruBak_scaffold_90013            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6433 3 +     36432 a-----g--g
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hoolock_leuconedys.ctg274                                    460434 3 +    630532 a-----g--a
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   8503 3 -     22022 A-----G--A
i Hyaena_hyaena.HyaHya_flattened_line_62789              C 0 C 0
s Hylobates_agilis.k141_967383                                1703 3 -      4846 A-----G--A
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                161 3 -      8919 A-----G--A
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555132 3 - 191637585 a-----g--a
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3348019 3 -  11177569 a-----g--a
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543737 3 -   7955117 A-----G--A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_1997670                                    2160 3 +      8453 a-----g--a
i Indri_indri.k141_1997670                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29155 3 -     31341 a-----g--g
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8298627 3 -   9596543 A-----G--A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                  4906 3 +     97402 a-----g--g
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         33104 3 -     38430 a-----g--g
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544322 3 -  30322482 a-----g--a
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_2922                            8705 3 -     24677 a-----g--a
i Lepilemur_ankaranensis.k141_2922                       C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4674 3 -     31569 a-----g--a
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                         22736 3 +     25010 a-----g--a
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      48290 3 +     54090 a-----g--a
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3074416 3 +   3914936 a-----g--a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_57262                     12856 3 -     23961 g-----g--a
i Lepus_americanus.LepAme_scaffold_57262                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             299072 3 -    662738 a-----g--g
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1464665 3 +   1826925 A-----A--A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2958567                            3771 3 -     22734 A-----A--G
i Loris_lydekkerianus.k141_2958567                       C 0 C 0
s Loris_tardigradus.ctg83                                  1061199 3 +   6120653 A-----A--G
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17988058 3 -  59628241 a-----g--a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              32921 3 +     40492 A-----G--A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59702846 3 +  60120075 A-----G--A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_794849                                 7040 3 +      8714 A-----G--A
i Macaca_cyclopis.k119_794849                            C 0 C 0
s Macaca_fascicularis.k141_814140                           107474 3 -    114318 A-----G--A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_943731                                  7285 3 +     13165 A-----G--A
i Macaca_fuscata.k119_943731                             C 0 C 0
s Macaca_leonina.k141_2438370                                12658 3 -     14632 A-----G--A
i Macaca_leonina.k141_2438370                            C 0 C 0
s Macaca_maura.k141_515834                                   12816 3 +     14712 A-----G--A
i Macaca_maura.k141_515834                               C 0 C 0
s Macaca_mulatta.NC_041758.1                             186866855 3 + 187317192 a-----G--A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25491970 3 -  25927173 a-----G--A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_128247                                   20286 3 +     98240 A-----G--A
i Macaca_nigra.k141_128247                               C 0 C 0
s Macaca_radiata.k141_3254723                                 5828 3 +     10028 A-----G--A
i Macaca_radiata.k141_3254723                            C 0 C 0
s Macaca_siberu.k141_1929020                                  7080 3 -      9047 A-----G--A
i Macaca_siberu.k141_1929020                             C 0 C 0
s Macaca_silenus.Contig273                                  358089 3 -    668171 A-----G--A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_596453                                 1461 3 -      5469 A-----G--A
i Macaca_thibetana.k99_596453                            C 0 C 0
s Macaca_tonkeana.k141_683787                                 7299 3 +      9199 A-----G--A
i Macaca_tonkeana.k141_683787                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961741 3 -  24302211 a-----g--a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               377494 3 +    752769 a-----g--a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              40148 3 +    737560 a-----g--a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              72319 3 -    317179 a-----g--a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33124804 3 -  40650429 A-----G--A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23235 3 +     74585 a-----g--a
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 66014 3 +    140813 G-----G--A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12212320 3 -  29670104 A-----G--G
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_74495                     4881 3 -     19186 a-----g--g
i Mesoplodon_bidens.MesBid_scaffold_74495                C 0 C 0
s Microcebus_murinus.CM007674.1                           18313288 3 -  93316391 A-----G--A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_791330                           1612 3 -     13566 a-----g--a
i Miopithecus_ogouensis.k141_791330                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        24856 3 +     26817 A-----G--A
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    56809 3 -    437263 a-----g--g
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  31999 3 +     82753 a-----g--g
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21402 3 +     63510 A-----G--A
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mus_pahari.LT608297.1                                   31390792 3 -  89631738 A-----G--A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_74954             15317 3 -     17106 A-----G--A
i Muscardinus_avellanarius.MusAve_scaffold_74954         C 0 C 0
s Mustela_putorius.JH418006.1                               330447 3 -  14710649 a-----g--a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14186 1 -     28317 a---------
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 C 0
s Nasalis_larvatus.k141_970469                               18471 3 +     37058 A-----G--A
i Nasalis_larvatus.k141_970469                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343409 3 +  31847680 a-----g--a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5894861 3 +   7148211 a-----g--g
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9181948 3 -   9404916 a-----g--a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Odobenus_rosmarus.KB229312.1                              533959 3 -   2017862 c-----g--a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         168659 3 +    630418 a-----g--g
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107540 3 -    150152 a-----g--g
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25167 3 +    140218 A-----A--A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                   12325 3 +     41509 A-----T--A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  2812087 3 -  10937097 a-----g--g
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1732 1 -      4812 g---------
i Orycteropus_afer.OryAfe_flattened_line_327065          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190458 3 + 174332312 g-----g--a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       495015 3 -    559221 a-----g--a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17617469 3 +  44047080 a-----g--g
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1470 3 -     13921 A-----G--G
i Ovis_canadensis.OviCan_scaffold_75879                  C 0 C 0
s Pan_paniscus.KQ411608.1                                     3327 3 +     15831 a-----G--A
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649141 3 + 189151597 a-----G--A
i Pan_troglodytes.CM009242.2                             C 0 I 14
s Panthera_onca.PanOnc_flattened_line_3271                  181217 3 +    230217 a-----g--t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                296014 3 +  18783137 a-----g--t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4751360 3 -   8748460 a-----g--t
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1296387 3 -   2937107 a-----g--g
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183469914 3 + 183742232 a-----G--A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_703094                              6252 3 -     17637 a-----g--a
i Papio_cynocephalus.k141_703094                         C 0 C 0
s Papio_hamadryas.Contig39                                20592411 3 +  20919399 a-----g--a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  31676 3 +     41871 a-----g--a
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_2087334                                    7259 3 -     13745 A-----G--A
i Papio_papio.k141_2087334                               C 0 C 0
s Papio_ursinus.k141_4818248                                 14759 3 +     25215 A-----G--A
i Papio_ursinus.k141_4818248                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42152 3 -     78924 a-----g--a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1387561                          11701 3 +     15382 A-----A--G
i Perodicticus_ibeanus.k141_1387561                      C 0 C 0
s Perodicticus_potto.k141_842195                             18251 3 -     21729 A-----A--G
i Perodicticus_potto.k141_842195                         C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13492 3 +     28765 A-----G--A
i Perognathus_longimembris.PerPac_flattened_line_39705   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18244894 3 -  18517816 A-----T--A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              38790 3 +     63832 a-----g--g
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                           28711 3 -     55023 A-----G--A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64129 3 +     89929 A-----G--A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14220 3 -     40849 A-----G--A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326697 3 -  14605196 a-----G--A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                             19512 3 +     26961 c-----a--g
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15525 3 +     23417 c-----g--g
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19506 3 +     29694 c-----a--g
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44541 3 +     52772 c-----g--g
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19532 3 +     26198 c-----a--g
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3955867 3 +   4542175 c-----g--g
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19459 3 -     23490 c-----g--g
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           4958 3 -      7527 a-----g--g
i Platanista_gangetica.PlaMin_flattened_line_175331      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       22233 3 -     39866 A-----G--G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        31391 3 +     34906 A-----G--G
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       35654 3 +     87950 A-----G--G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     36453 3 +     88961 A-----G--G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         22146 3 +     39403 A-----G--G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          35922 3 -     87928 A-----G--G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         42903 3 +     60166 A-----G--G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43096 3 +     67232 A-----G--G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38561 3 +     90634 A-----G--G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          35944 3 -     89403 A-----G--G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189181865 3 + 189387572 a-----G--A
i Pongo_abelii.CM009266.2                                C 0 I 55
s Pongo_pygmaeus.ctg66                                     9596759 3 +   9816681 a-----g--a
i Pongo_pygmaeus.ctg66                                   C 0 I 55
s Presbytis_comata.k141_1230337                              18296 3 -     69807 A-----G--A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              11658 3 +     80239 a-----g--a
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_112514                11553 1 +     16234 G---------
i Procavia_capensis.ProCapCap_scaffold_112514            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2616955 3 -   4620579 A-----G--A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1013011 3 +   2598838 A-----G--A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_114130                           9079 3 -     19127 a-----g--a
i Propithecus_coronatus.k141_114130                      C 0 C 0
s Propithecus_diadema.k141_599139                            10173 3 +     10533 a-----g--a
i Propithecus_diadema.k141_599139                        C 0 C 0
s Propithecus_edwardsi.k141_635656                             415 3 +     30655 a-----g--a
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_217725                            2607 3 +     14082 a-----c--a
i Propithecus_perrieri.k141_217725                       C 0 C 0
s Propithecus_tattersalli.k141_790011                        50292 3 -     67325 a-----g--a
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7085 3 -     35169 a-----g--a
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036367.1                            19280 3 -     31435 G-----G--A
i Psammomys_obesus.NESX01036367.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14143 3 +     25061 a-----g--a
i Pteronura_brasiliensis.PteBra_flattened_line_42152     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20305816 3 -  38429054 a-----g--t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             40366 3 -     91421 a-----g--a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7634546 3 +   7812017 A-----G--A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             40408 3 -     72585 a-----g--a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31131 3 +     55207 a-----g--g
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53606053 3 +  90668790 A-----G--A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_188731                            15614 3 -     21983 A-----G--A
i Rhinopithecus_bieti.k119_188731                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91261983 3 - 195417433 a-----G--A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7701074 3 +   7961872 a-----g--a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1190 3 -      3450 a-----g--g
i Saiga_tatarica.SaiTat_scaffold_455678                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119968369 3 - 121099817 A-----G--G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40661 3 +     46362 A-----G--G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               40721 3 +     45824 A-----G--G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             57389 3 -     64574 A-----G--G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                              20483 3 -     23631 A-----G--G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 40647 3 -     61129 A-----G--G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5441846 2 -   5703754 ------G--G
i Sapajus_apella.ctg103                                  I 1 I 1849
s Sapajus_macrocephalus.k141_351809                          72930 3 -     80660 A-----G--G
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    176966 3 -    313613 a-----g--a
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1705875                         5614 3 +     17286 A-----G--A
i Semnopithecus_entellus.k141_1705875                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                       5739 3 -     58920 A-----G--A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                            5647 3 +     45317 A-----G--A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_960425                             5760 3 +      9426 A-----G--A
i Semnopithecus_priam.k141_960425                        C 0 C 0
s Semnopithecus_schistaceus.k141_972136                       5653 3 +     24620 A-----G--A
i Semnopithecus_schistaceus.k141_972136                  C 0 C 0
s Semnopithecus_vetulus.k141_654052                           1583 3 -      5251 A-----G--A
i Semnopithecus_vetulus.k141_654052                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                     4366 3 -     77746 A-----G--G
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126              23050 3 +   1910179 A-----G--A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13682185 3 -  18376816 T-----G--T
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1975986 3 -   3870691 A-----G--A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             58924 8 +     97271 aaaaaaa--a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              47903 3 -    196729 a-----g--a
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   63022671 3 -  69701581 a-----g--g
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1105152 3 -   1523678 a-----g--a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93701 1 +    116680 a---------
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138531 3 -    156842 a-----a--a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    407003 3 +    539355 a-----g--a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               50428 3 +     70052 a-----g--a
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_722827                               14820 3 +     18080 A-----G--A
i Tarsius_wallacei.k141_722827                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186466129 3 + 186847797 a-----G--A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_41106                    5672 1 +     27660 A---------
i Tolypeutes_matacus.TolMat_scaffold_41106               C 0 C 0
s Trachypithecus_auratus.k141_95322                          12129 3 -     15799 A-----G--A
i Trachypithecus_auratus.k141_95322                      C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     25496 3 +     78344 A-----G--A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_581431                       12300 3 -     15970 A-----G--A
i Trachypithecus_cristatus.k141_581431                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      11262 3 +     62838 A-----G--A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_119873                            12227 3 -     17556 A-----G--A
i Trachypithecus_geei.k141_119873                        C 0 C 0
s Trachypithecus_germaini.k141_545543                        12241 3 -     15912 A-----G--A
i Trachypithecus_germaini.k141_545543                    C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      11191 3 +     64340 A-----G--A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          12190 3 +     63452 A-----G--A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_283481                   11265 3 +     21341 A-----G--A
i Trachypithecus_leucocephalus.k141_283481               C 0 C 0
s Trachypithecus_melamera.k141_261742                         1327 3 +     11697 A-----G--A
i Trachypithecus_melamera.k141_261742                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                        13108 3 +     33539 A-----G--A
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5964936 3 +   6242583 A-----G--A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_583962                        13024 3 +     14028 A-----G--A
i Trachypithecus_pileatus.k141_583962                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                     4824 3 +    200418 a-----g--g
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            4313641 1 +  10818551 G---------
i Trichechus_manatus.JH594705.1                          C 0 I 4
s Tursiops_truncatus.MRVK01000835.1                       15765500 3 +  33153633 a-----g--g
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     798 3 +     21056 a-----g--a
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                               4878239 3 -   5085361 a-----g--a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  31645 3 +     50397 a-----g--a
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1100575                              6734 3 +     25465 a-----g--a
i Varecia_variegata.k141_1100575                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5390018 3 -   5488506 a-----a--g
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 42768 3 -     43706 a-----g--a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                         24627 3 +    224448 A-----G--A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29833 3 +     86975 a-----g--a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      38796 3 +     63895 G-----G--A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21647 3 -     22999 a-----g--g
i Ziphius_cavirostris.ZipCav_flattened_line_16896        C 0 C 0
e Erinaceus_europaeus.JH835339.1                           3365133 123 -   7059049 I
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Desmodus_rotundus.KZ672289.1                             8650437 3 +  20541912 I
e Otolemur_garnettii.GL873799.1                             738064 15 -   1103335 I
e Otolemur_crassicaudatus.k141_187572                         4411 15 -      5557 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827818 0 + 199412804 C
e Nycticebus_coucang.k141_921975                              9471 0 +     15238 C
e Nycticebus_bengalensis.LG01                            102653329 0 - 196305487 C
e Galagoides_demidoff.k141_1153324                           11777 0 +     12379 C
e Galago_senegalensis.k141_991736                             1874 15 -     22493 I
e Galago_moholi.ctg3793                                        758 15 +    137831 I
e Carollia_perspicillata.CarPer_scaffold_737331                421 3 -       918 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                 26946 3 +     43469 I
e Tonatia_saurophila.TonSau_scaffold_294                    103728 3 +    610378 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                31530 0 +     41958 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17424 0 +    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                        389332 0 -   3329780 C
e Pteropus_vampyrus.KN525825.1                             1390053 0 +   4952924 C
e Pteropus_alecto.KB030862.1                              23005967 0 +  28871421 C
e Pteronotus_parnellii.KE854991.1                             1663 0 -     11709 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 162106 0 -    366855 C
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_39861                18895 3 -     30105 I
e Megaderma_lyra.MegLyr_scaffold_4542                        36015 0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                 24123 0 +    270270 C
e Hipposideros_galeritus.HipGal_scaffold_65612                9129 0 -     20285 C
e Hipposideros_armiger.JXIK01000431.1                       132216 0 +   1711038 C
e Eidolon_helvum.KE797349.1                                  19343 0 -     31197 C
e Craseonycteris_thonglongyai.CraTho_scaffold_153350           127 2 +      5041 I
e Anoura_caudifer.AnoCau_scaffold_1412                      209496 3 +    412891 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11140 14 +     36723 CGAGACTGG----A-------TA-G--------------A
s Acinonyx_jubatus.LLWD01001279.1                           836417 14 +   1699592 agagactag----a-------tg-a--------------a
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     10685 14 -     63021 TGATACTTA----G-------GA-A--------------A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 4
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538352 21 -  29979442 tcaaacaaa----ataaaaaata-a--------------a
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            107802 14 -    347723 tgagacaaa----a-------ta-a--------------a
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                     1365 14 +     61208 CGACACTGG----A-------GA-A--------------A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 4
s Allenopithecus_nigroviridis.k141_3361533                   40702 14 -     52922 cgagactgg----a-------TA-G--------------A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          7024 14 +     11307 CGAGACTGG----A-------TA-G--------------A
i Allochrocebus_lhoesti.k141_1932296                     C 0 C 0
s Allochrocebus_preussi.k141_499905                           7196 14 -     13300 cgagactgg----a-------ta-g--------------a
i Allochrocebus_preussi.k141_499905                      C 0 C 0
s Allochrocebus_solatus.k141_139760                           9077 14 +     12926 cgagactgg----a-------ta-g--------------a
i Allochrocebus_solatus.k141_139760                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             31741 14 +     51355 tgagaccag----a-------ca-g--------------a
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               24887 14 -     36483 tgagaccag----a-------ca-g--------------a
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              6992 14 -     13496 tgagaccag----a-------ca-g--------------a
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23774 14 +     27940 TGAGACCAG----A-------CA-G--------------A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15582 14 -     39310 TGAGACCAG----A-------CA-G--------------A
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            23840 14 +     30492 tgagaccag----a-------ca-g--------------a
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28071 14 +     47717 tgagaccag----a-------ca-g--------------a
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_2029433                            79043 14 +     87306 tgagaccag----a-------ca-g--------------a
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             39025 14 +     50774 TGAGACCAG----A-------CA-G--------------A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707756 14 -   2318259 ctagactgg----a-------tt-a--------------a
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303             26986 14 -     32520 ctagactgT----A-------TT-A--------------A
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_2596348                                   5273 14 +     12024 tgagaccag----a-------ta-g--------------g
i Aotus_azarae.k141_2596348                              C 0 C 0
s Aotus_griseimembra.k141_2227177                             4939 14 -     10972 tgagaccag----a-------ta-g--------------g
i Aotus_griseimembra.k141_2227177                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4333400 14 -   5030052 TGAGACCAG----A-------TA-G--------------G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_1801223                              5332 14 -     12698 tgagaccag----a-------ta-g--------------g
i Aotus_trivirgatus.k141_1801223                         C 0 C 0
s Aotus_vociferans.k141_506037                                4792 14 -     11998 tgagaccag----a-------ta-g--------------g
i Aotus_vociferans.k141_506037                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22183 14 +     39421 tggaactgc----a-------gc-a--------------a
i Aplodontia_rufa.AprRuf_scaffold_37633                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       14281  4 +     45910 TCAG------------------------------------
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21232036 14 -  21539123 tgagaccag----a-------ca-g--------------a
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3108 14 -     48076 tgagaccag----a-------ca-g--------------a
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18574 14 -     22344 tgagaccag----a-------ca-g--------------a
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31630 14 -     89868 tgagaccag----a-------ca-g--------------a
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36043 14 -     40414 tgagaccag----a-------ca-g--------------a
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                43877 14 +     72325 tgagaccag----a-------ca-g--------------a
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75632 14 -     92717 tgaggccgg----a-------ta-a--------------a
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              76215 14 +     85213 tgaggccgg----a-------ta-a--------------a
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222415 14 +  23207421 caagactgg----a-------tt-a--------------a
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4418 14 +     25979 caagactgg----a-------tt-a--------------a
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     12814 14 -    124022 CTAGACTGG----A-------TT-A--------------A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                    232992 14 -    288883 ctagactgg----A-------TT-A--------------A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20306367 14 +  48749331 ctagactgg----a-------tt-a--------------a
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1159469 14 -   1948126 ctagactgg----a-------tt-a--------------a
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18116579 14 +  45695690 ctagactgg----a-------tt-a--------------a
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2852034 14 +   4408762 CTAGACTGG----A-------TT-A--------------A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                116900 14 -    122966 TGAGACCAG----A-------TG-G--------------A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76378 14 +     81800 TGAGACCAG----A-------TG-G--------------A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45583 14 -     95584 TGAGACCAG----A-------TG-G--------------A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69678 14 -    119600 tgagaccag----a-------tg-g--------------a
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020408  8 -  17673402 caagactg--------------------------------
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           2353238  8 -   7040546 caagactg--------------------------------
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                  421497  8 -   1652518 caagactg--------------------------------
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           17831694 14 -  60362399 agagatgag----a-------ta-a--------------a
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32438 14 -     43241 agagatgag----a-------ta-a--------------a
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067162 14 -   9314153 agagatgag----a-------ta-a--------------a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17991821 14 -  59632846 agagatgag----a-------ta-a--------------a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18532927 14 +  63665305 agagatgag----a-------ta-a--------------a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18861819 14 +  46296322 CTAGACTGG----A-------TT-A--------------A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18092537 14 -  44709034 CTCGACTGG----A-------TT-A--------------A
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           179854 14 -    496798 TGAGACTGC----G-------TA-A--------------A
i Carlito_syrichta.NW_007259797.1                        C 0 I 4
s Castor_canadensis.CasCan_scaffold_2074                    167084 12 +    179628 TGACAC--G----A-------GA-A--------------A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 4
s Catagonus_wagneri.CatWag_scaffold_2839                    113370 14 +    217609 caggacagg----a-------tt-a--------------a
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebus_albifrons.Contig27                                25675522 14 +  26074798 tgagaccag----g-------ca-g--------------g
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               21990 14 +     28840 tgagaccag----g-------ca-g--------------g
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7661 14 +     13997 tgagaccag----g-------ca-g--------------g
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29779 14 +     31688 TGAGACTGC----C-------TA-A--------------A
i Cephalopachus_bancanus.k141_1423433                    C 0 I 4
s Ceratotherium_simum.JH767749.1                          12257201 14 +  27778364 caagagtgg----a-------ta-a--------------a
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          2908 14 +     15641 caagagtgg----a-------ta-a--------------a
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4501676 14 +   4669795 CGAGACTGG----A-------TA-G--------------A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_2766003                       22948 14 -     30935 CGAGACTGG----A-------TA-G--------------A
i Cercocebus_chrysogaster.k141_2766003                   C 0 C 0
s Cercocebus_lunulatus.k141_245046                            7350 14 +     18174 CGAGACTGG----A-------TA-G--------------A
i Cercocebus_lunulatus.k141_245046                       C 0 C 0
s Cercocebus_torquatus.k141_4063387                           7187 14 +     18249 CGAGACTGG----A-------TA-G--------------A
i Cercocebus_torquatus.k141_4063387                      C 0 C 0
s Cercopithecus_ascanius.k141_4281816                         2306 14 -      5884 CGAGACTGG----A-------TA-G--------------A
i Cercopithecus_ascanius.k141_4281816                    C 0 C 0
s Cercopithecus_cephus.k141_1630443                           1330 14 +      4620 CGAGACTGG----A-------TA-G--------------A
i Cercopithecus_cephus.k141_1630443                      C 0 C 0
s Cercopithecus_diana.k141_488174                             7766 14 +     10982 CGAGACTGG----A-------TA-G--------------A
i Cercopithecus_diana.k141_488174                        C 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1312 14 +      4810 CGAGACTGG----A-------TA-G--------------A
i Cercopithecus_hamlyni.k141_1302205                     C 0 C 0
s Cercopithecus_lowei.k141_4082698                            7228 14 +     34178 cgggactgg----a-------TA-G--------------A
i Cercopithecus_lowei.k141_4082698                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38849338 14 +  39242232 cgagactgg----a-------ta-g--------------a
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21252938 14 -  21565898 CGAGACTGG----A-------TA-G--------------A
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_557928                         7394 14 -     18401 CGAGACTGG----A-------TA-G--------------A
i Cercopithecus_neglectus.k141_557928                    C 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7457 14 -     15013 CGAGACTGG----A-------TA-G--------------A
i Cercopithecus_nictitans.k141_1200139                   C 0 C 0
s Cercopithecus_petaurista.k141_365908                        7428 14 +     11214 CGAGACTGG----A-------TA-G--------------A
i Cercopithecus_petaurista.k141_365908                   C 0 C 0
s Cercopithecus_pogonias.k141_391400                          2248 14 -     13831 CGGGACTGG----A-------TA-G--------------A
i Cercopithecus_pogonias.k141_391400                     C 0 C 0
s Cercopithecus_roloway.k141_1248991                         27422 14 +     68532 cgagactgg----a-------ta-g--------------a
i Cercopithecus_roloway.k141_1248991                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             493  5 -      1897 --------G----G-------CG-G---------------
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       C 0 C 0
s Cheirogaleus_major.k141_333249                             43623 14 -     52598 cgaggctgg----g-------tg-a--------------a
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           38954 14 +     57038 cgaggctgg----a-------tg-a--------------g
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Cheracebus_lucifer.k141_49986                               9798 14 -     17098 TGAGACCAG----A-------TT-G--------------A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9668 14 +     17877 TGAGACCAG----A-------TG-G--------------A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167235 14 -    216457 tgagaccag----a-------tg-g--------------a
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71708 14 +     76511 TGAGACCAG----A-------TG-G--------------A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          113925 14 +    146308 cgagaccag----a-------tg-g--------------a
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          45833 14 -     50570 CGAGACCAG----A-------TG-G--------------A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455206 14 -  18827391 cgagactgg----a-------ta-g--------------a
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41149 14 -     50209 cgagactgg----a-------ta-g--------------a
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448131 14 + 135778131 CGAGACTGG----A-------TA-G--------------A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   699 20 -     25429 --------G----A-------TG-ACACAGGATAAAATAG
i Choloepus_didactylus.ChoDid_scaffold_22546             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            195827 20 +    839153 --------g----a-------tg-acacaggataaaatag
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               6534  4 -      9651 --------a----a-------tg-----------------
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          C 0 I 1
s Colobus_angolensis.KN981557.1                            1936072 14 +   2368649 CGAGACTGG----A-------TA-G--------------A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199970050 14 + 200372422 cgagactgg----a-------ta-g--------------a
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              58364 14 +     84244 CGAGACTGG----A-------TA-G--------------A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17566277 14 -  53390261 TCAGACTGG----A-------TA-A--------------A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 16588 14 +     83289 TAATACAGA----G-------GA-A--------------A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 4
s Cricetulus_griseus.LT883664.1                           11697220 14 + 224834208 TGATGCTTa----g-------gg-a--------------a
i Cricetulus_griseus.LT883664.1                          C 0 I 4
s Crocidura_indochinensis.CroInd_scaffold_123729              8617 14 -      9007 GTAAACTAG----G-------CA-G--------------A
i Crocidura_indochinensis.CroInd_scaffold_123729         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59139  8 -     87169 agagatgg--------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 1
s Dasypus_novemcinctus.JH564415.1                            92295  6 +   2246927 --------G----A-------TG-G--------------G
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12562393  6 -  12879189 tgaaac----------------------------------
i Daubentonia_madagascariensis.ctg71                     C 0 I 2
s Delphinapterus_leucas.KZ290073.1                        16841566 14 +  35494412 caagactgg----a-------tt-a--------------a
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  698996 14 +   1390856 caagagtgg----a-------ta-a--------------a
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                   31799 14 +    198055 caagagtgg----a-------ta-a--------------a
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18914622 12 +  37912305 TGACAC--A----A-------GG-A--------------A
i Dipodomys_ordii.KN672350.1                             C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_47531                  13220 12 -     26976 TGACAC--A----A-------TG-A--------------A
i Dipodomys_stephensi.DipSte_scaffold_47531              C 0 I 3
s Elaphurus_davidianus.JRFZ01104969.1                       341993 14 +    607251 ctagactgg----A-------TT-C--------------A
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          47616 16 -    110024 tgatgctga----a-------aa-a------------aaa
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 5
s Ellobius_talpinus.LOJH01050844.1                            8869 14 +     12610 TGATGctga----a-------aa-a--------------a
i Ellobius_talpinus.LOJH01050844.1                       C 0 I 5
s Enhydra_lutris.KZ291758.1                               16365699 14 -  41312741 tgagacaaa----a-------ta-a--------------a
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1310305 14 +   4378816 caaccctgg----a-------ta-a--------------a
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18557773 14 -  39960074 caagtctgg----a-------ta-a--------------a
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               59814 14 +    498745 caagtctgg----a-------ta-a--------------a
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21237412 14 -  21539334 cgagactgg----a-------ta-g--------------a
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           40748 14 +    133382 caagactgg----a-------tt-a--------------a
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5041 14 -     25849 caagactgg----a-------tt-a--------------a
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_1869827                             12740 14 -     21348 taaggccgg----a-------tg-a--------------a
i Eulemur_albifrons.k141_1869827                         C 0 C 0
s Eulemur_collaris.k141_601111                                9942 14 +     70999 tgaggccgg----a-------tg-a--------------a
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                               7681 14 -    112731 tgaggccgg----a-------tg-a--------------a
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                              6691 14 -     68309 tgaggctgg----a-------tg-a--------------a
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_2627385                                 3827 14 -      9374 tgaggccgg----a-------tg-a--------------a
i Eulemur_fulvus.k141_2627385                            C 0 C 0
s Eulemur_macaco.k141_1562045                                32922 14 +     75513 tgaggccgg----a-------tg-a--------------a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 30806 14 +     97555 cgaggccgg----a-------tg-a--------------a
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            7462 14 -     30972 tgaggccgg----a-------tg-a--------------a
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_1120150                                  7339 14 +     16616 tgaggccgg----a-------tg-a--------------a
i Eulemur_rufus.k141_1120150                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              33924 14 +    111500 tgaggccgg----a-------tg-a--------------a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20267571 14 + 206538554 agagactaa----a-------tg-a--------------a
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20226349 14 + 205367284 agagactaa----a-------tg-a--------------a
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  3359 14 -     25330 AGAGACTAA----A-------TG-A--------------A
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_75343               15819 14 -     17176 caagactgg----a-------ta-a--------------a
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     636850 14 -    660261 ctagactgg----A-------TT-A--------------A
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_149316                            5012 14 +      8016 TGACACTCA----A-------GT-A--------------A
i Glis_glis.GliGli_scaffold_149316                       C 0 I 4
s Gorilla_beringei.k141_179627                                 907 14 +      1068 cgagactgg----a-------ta-g--------------a
i Gorilla_beringei.k141_179627                           C 0 C 0
s Gorilla_gorilla.LT578341.1                             186365021 14 + 186649187 CGAGACTGG----A-------TA-G--------------A
i Gorilla_gorilla.LT578341.1                             C 0 I 38
s Graphiurus_murinus.GraMur_scaffold_10447                   54763 14 +     78134 tgaCACTCA----A-------GT-A--------------A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 4
s Hapalemur_alaotrensis.k141_330369                           7336 14 +     40692 tgaggccgg----a-------tg-a--------------a
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_435261                             17024 14 +     22537 tgaggccgg----a-------tg-a--------------a
i Hapalemur_gilberti.k141_435261                         C 0 C 0
s Hapalemur_griseus.k141_679418                              15671 14 -     28566 tgaggccgg----a-------tg-a--------------a
i Hapalemur_griseus.k141_679418                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         14403 14 +     42923 tgaggccgg----a-------tg-a--------------a
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17658 14 +     53142 tgaggccgg----a-------tg-a--------------a
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               272825  8 +    327341 AGAGATGG--------------------------------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14539 14 -     48891 ctagactgg----a-------tt-a--------------a
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10237  4 -     15841 --------G----G-------TA-----------------
i Heterohyrax_brucei.HetBruBak_scaffold_90013            C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6436 14 +     36432 caagactgg----a-------tt-a--------------a
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hoolock_leuconedys.ctg274                                    460437 14 +    630532 tgagactgg----a-------ta-g--------------g
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   8506  8 -     22022 AGAGGTGG--------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_62789              C 0 I 1
s Hylobates_agilis.k141_967383                                1706 14 -      4846 CGAGACTGG----A-------CA-G--------------G
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                164 14 -      8919 CGAGACTGG----A-------TA-G--------------G
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555135 14 - 191637585 cgagactgg----a-------ta-g--------------g
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3348022 14 -  11177569 cgagactgg----a-------ta-g--------------g
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543740 14 -   7955117 TGGCACTGC----A-------GT-G--------------A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_1997670                                    2163 14 +      8453 tgaggccga----a-------ta-a--------------a
i Indri_indri.k141_1997670                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29158 14 -     31341 caagactgg----a-------tt-a--------------a
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8298630 14 -   9596543 TGATTCTAG----A-------GG-A--------------A
i Jaculus_jaculus.JH725527.1                             C 0 I 4
s Kogia_breviceps.KogBre_flattened_line_3970                  4909 14 +     97402 caagactgg----a-------tt-a--------------a
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         33107 14 -     38430 tgagaccag----a-------ca-g--------------a
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544325 14 -  30322482 tgaggccgg----a-------tg-a--------------a
i Lemur_catta.scaffold_24                                C 0 I 7
s Lepilemur_ankaranensis.k141_2922                            8708 14 -     24677 tgaggccgg----a-------tg-a--------------a
i Lepilemur_ankaranensis.k141_2922                       C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4677 14 -     31569 tgaggccgg----a-------tg-a--------------a
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                         22739 14 +     25010 tgaggccag----a-------tg-a--------------a
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      48293 14 +     54090 tgaggccgg----a-------tg-a--------------a
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3074419 14 +   3914936 tgagacaaa----a-------ta-a--------------a
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_57262                     12859 14 -     23961 agagaccag----a-------taaa---------------
i Lepus_americanus.LepAme_scaffold_57262                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             299075 14 -    662738 caagactgg----a-------tt-a--------------a
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1464668 14 +   1826925 CGAGACTGG----A-------TA-G--------------A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2958567                            3774  4 -     22734 CGAG------------------------------------
i Loris_lydekkerianus.k141_2958567                       C 0 C 0
s Loris_tardigradus.ctg83                                  1061202  4 +   6120653 CGAG------------------------------------
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17988061 14 -  59628241 agagataag----a-------ta-a--------------a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              32924 14 +     40492 CAAGACTGG----A-------TA-G--------------A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59702849 14 +  60120075 CAAGACTGG----A-------TA-G--------------A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_794849                                 7043 14 +      8714 CAAGACTGG----A-------TA-G--------------A
i Macaca_cyclopis.k119_794849                            C 0 C 0
s Macaca_fascicularis.k141_814140                           107477 14 -    114318 CAAGACTGG----A-------TA-G--------------A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_943731                                  7288 14 +     13165 CAAGACTGG----A-------TA-G--------------A
i Macaca_fuscata.k119_943731                             C 0 C 0
s Macaca_leonina.k141_2438370                                12661 14 -     14632 CAAGACTGG----A-------TA-G--------------A
i Macaca_leonina.k141_2438370                            C 0 C 0
s Macaca_maura.k141_515834                                   12819 14 +     14712 CAAGACTGG----A-------TA-G--------------A
i Macaca_maura.k141_515834                               C 0 C 0
s Macaca_mulatta.NC_041758.1                             186866858 14 + 187317192 CAAGACTGG----A-------TA-G--------------A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25491973 14 -  25927173 CAAGACTGG----A-------TA-G--------------A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_128247                                   20289 14 +     98240 CAAGACTGG----A-------TA-G--------------A
i Macaca_nigra.k141_128247                               C 0 C 0
s Macaca_radiata.k141_3254723                                 5831 14 +     10028 CAAGACTGG----A-------TA-G--------------A
i Macaca_radiata.k141_3254723                            C 0 C 0
s Macaca_siberu.k141_1929020                                  7083 14 -      9047 CAAGACTGG----A-------TA-G--------------A
i Macaca_siberu.k141_1929020                             C 0 C 0
s Macaca_silenus.Contig273                                  358092 14 -    668171 CAAGACTGG----A-------TA-G--------------A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_596453                                 1464 14 -      5469 CAAGACTGG----A-------TA-G--------------A
i Macaca_thibetana.k99_596453                            C 0 C 0
s Macaca_tonkeana.k141_683787                                 7302 14 +      9199 CAAGACTGG----A-------TA-G--------------A
i Macaca_tonkeana.k141_683787                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961744 14 -  24302211 cgagactgg----a-------ta-g--------------a
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               377497 14 +    752769 cgagactgg----a-------ta-g--------------a
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              40151 14 +    737560 tgaggctgg----a-------ta-a--------------a
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              72322 14 -    317179 caagactgg----a-------ta-a--------------a
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33124807 14 -  40650429 TGGCACTGC----A-------GT-A--------------A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23238 14 +     74585 ggagataaa----a-------tt-a--------------a
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 66017 18 +    140813 TGATGCTAATAAAA-------TA-A--------------A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 3
s Mesocricetus_auratus.KB708134.1                         12212323 14 -  29670104 TGATGCtta----g-------gg-a--------------a
i Mesocricetus_auratus.KB708134.1                        C 0 I 4
s Mesoplodon_bidens.MesBid_scaffold_74495                     4884 14 -     19186 caagactgg----a-------tt-a--------------a
i Mesoplodon_bidens.MesBid_scaffold_74495                C 0 C 0
s Microcebus_murinus.CM007674.1                           18313291 14 -  93316391 TGAGGCCAG----A-------TG-A--------------A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_791330                           1615 14 -     13566 cgagactgg----a-------TA-G--------------A
i Miopithecus_ogouensis.k141_791330                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        24859 14 +     26817 TGAGACAAA----A-------TA-A--------------A
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    56812 14 -    437263 caagactgg----a-------tt-a--------------a
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32002  5 +     82753 ctaga-----------------------------------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21405  8 +     63510 AGAGATGG--------------------------------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 1
s Mus_pahari.LT608297.1                                   31390795 14 -  89631738 TAAtgctga----a-------ga-a--------------a
i Mus_pahari.LT608297.1                                  C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_74954             15320 14 -     17106 TGACACTGG----A-------GT-A--------------A
i Muscardinus_avellanarius.MusAve_scaffold_74954         C 0 I 4
s Mustela_putorius.JH418006.1                               330450 15 -  14710649 tgagacaaa----a-------ttaa--------------a
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14187 20 -     28317 --------g----a-------tg-aggtggaataatatag
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 C 0
s Nasalis_larvatus.k141_970469                               18474 14 +     37058 CGAGACTGG----A-------CA-G--------------A
i Nasalis_larvatus.k141_970469                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343412 14 +  31847680 tgagacaaa----a-------ta-a--------------a
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5894864 14 +   7148211 caagactgg----a-------tt-a--------------a
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9181951 14 -   9404916 agagatgag----a-------ta-a--------------a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Odobenus_rosmarus.KB229312.1                              533962 14 -   2017862 tgagacaaa----a-------ta-a--------------a
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         168662 14 +    630418 ctagactgg----A-------TT-C--------------A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107543 14 -    150152 ctagactgg----A-------CT-A--------------A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25170 14 +    140218 TGATACTGA----A-------GA-A--------------A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_28377                   12328 14 +     41509 TGAAGCTGA----A-------GA-A--------------A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 4
s Orcinus_orca.KB316932.1                                  2812090 14 -  10937097 caagactgg----a-------tt-a--------------a
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1733  4 -      4812 --------g----a-------tg-----------------
i Orycteropus_afer.OryAfe_flattened_line_327065          C 0 I 1
s Oryctolagus_cuniculus.CM000791.1                        67190461 15 + 174332312 agagaccag----a-------taaa--------------a
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       495018 14 -    559221 agagatgag----a-------ta-a--------------a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Ovis_aries.CM001607.2                                   17617472 14 +  44047080 ctaaactgg----a-------tt-a--------------a
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1473 14 -     13921 CTAGACTGG----A-------TT-A--------------A
i Ovis_canadensis.OviCan_scaffold_75879                  C 0 C 0
s Pan_paniscus.KQ411608.1                                     3330 14 +     15831 CGAGACTGG----A-------TA-G--------------A
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.KZ622849.1                                 48144 14 +    110857 CGAGACTGG----A-------TA-G--------------A
i Pan_troglodytes.KZ622849.1                             n 14 I 430
s Panthera_onca.PanOnc_flattened_line_3271                  181220 14 +    230217 agagactag----a-------tg-a--------------a
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                296017 14 +  18783137 agagactag----a-------tg-a--------------a
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4751363 14 -   8748460 agagactag----a-------tg-a--------------a
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1296390 14 -   2937107 ctagactgg----a-------tt-a--------------a
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183469917 14 + 183742232 CGAGACTGG----A-------TA-G--------------A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_703094                              6255 14 -     17637 cgagactgg----a-------ta-g--------------a
i Papio_cynocephalus.k141_703094                         C 0 C 0
s Papio_hamadryas.Contig39                                20592414 14 +  20919399 cgagactgg----a-------ta-g--------------a
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  31679 14 +     41871 cgagactgg----a-------ta-g--------------a
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_2087334                                    7262 14 -     13745 TGAGACTGG----A-------TA-G--------------A
i Papio_papio.k141_2087334                               C 0 C 0
s Papio_ursinus.k141_4818248                                 14762 14 +     25215 CGAGACTGG----A-------TA-G--------------A
i Papio_ursinus.k141_4818248                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42155 14 -     78924 aggggtgag----a-------cg-c--------------a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1387561                          11704  4 +     15382 TCAG------------------------------------
i Perodicticus_ibeanus.k141_1387561                      C 0 C 0
s Perodicticus_potto.k141_842195                             18254  4 -     21729 TCAG------------------------------------
i Perodicticus_potto.k141_842195                         C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13495 12 +     28765 TGGCAC--A----A-------GG-A--------------A
i Perognathus_longimembris.PerPac_flattened_line_39705   C 0 I 3
s Peromyscus_maniculatus.KI615324.1                       18244897 14 -  18517816 TGatgctga----a-------ga-a--------------a
i Peromyscus_maniculatus.KI615324.1                      C 0 I 191
s Phocoena_phocoena.PhoPho_flattened_line_24159              38793 14 +     63832 caagactgg----a-------tt-a--------------a
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                           28714 14 -     55023 CAAGACTGG----A-------CA-G--------------A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64132 14 +     89929 CAAGACTGG----A-------CA-G--------------A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14223 14 -     40849 CAAGACTGG----A-------CA-G--------------A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326700 14 -  14605196 CAAGACTGC----A-------CA-G--------------A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                             19515 14 +     26961 tgagaccag----a-------ta-g--------------a
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15528 14 +     23417 tgagaccag----a-------tg-g--------------a
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19509 14 +     29694 tgagaccag----a-------ta-g--------------a
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44544 14 +     52772 tgagaccag----a-------ta-g--------------a
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19535 14 +     26198 tgagaccag----a-------ta-g--------------a
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3955870 14 +   4542175 tgagaccag----a-------tg-g--------------a
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19462 14 -     23490 tgagaccag----a-------ta-g--------------a
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           4961 14 -      7527 caagactgg----a-------tt-a--------------a
i Platanista_gangetica.PlaMin_flattened_line_175331      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       22236 14 -     39866 TGAGACCAG----A-------TG-G--------------A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        31394 14 +     34906 TGAGACCAG----A-------TG-G--------------A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       35657 14 +     87950 TGAGACCAG----A-------TG-G--------------A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     36456 14 +     88961 TGAGACCAG----A-------TG-G--------------A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         22149 14 +     39403 TGAGACCAG----A-------GG-G--------------A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          35925 14 -     87928 TGAGACCAG----A-------TG-G--------------A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         42906 14 +     60166 TGAGACCAG----A-------TG-G--------------A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43099 14 +     67232 TGAGACCAG----A-------TG-G--------------A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38564 14 +     90634 TGAGACCAG----A-------TG-G--------------A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          35947 14 -     89403 TGAGACCAG----A-------TG-G--------------A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189181923 14 + 189387572 GGAGACTGG----A-------TA-G--------------A
i Pongo_abelii.CM009266.2                                I 55 C 0
s Pongo_pygmaeus.ctg66                                     9596817 14 +   9816681 GGAGACTGG----A-------TA-G--------------A
i Pongo_pygmaeus.ctg66                                   I 55 C 0
s Presbytis_comata.k141_1230337                              18299 14 -     69807 CGAGACTGG----A-------CA-G--------------A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              11661 14 +     80239 cgagactgg----a-------ca-g--------------a
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_112514                11554  4 +     16234 --------G----G-------TA-----------------
i Procavia_capensis.ProCapCap_scaffold_112514            C 0 I 1
s Prolemur_simus.MPIZ01000396.1                            2616958 14 -   4620579 AGAGGCCGG----A-------TG-A--------------A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1013014 14 +   2598838 TGAGGCTGG----A-------TA-A--------------A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_114130                           9082 14 -     19127 tgaggctgg----a-------ta-a--------------a
i Propithecus_coronatus.k141_114130                      C 0 C 0
s Propithecus_diadema.k141_599139                            10176 14 +     10533 tgaggccgg----a-------ta-a--------------a
i Propithecus_diadema.k141_599139                        C 0 C 0
s Propithecus_edwardsi.k141_635656                             418 14 +     30655 tgaggccgg----a-------ta-a--------------a
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_217725                            2610 14 +     14082 tgaggccgg----a-------ta-a--------------a
i Propithecus_perrieri.k141_217725                       C 0 C 0
s Propithecus_tattersalli.k141_790011                        50295 14 -     67325 cgaggccgg----a-------ta-a--------------a
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7088 14 -     35169 tgaggctgg----a-------ta-a--------------a
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036367.1                            19283 18 -     31435 TGATGCTAATAAAA-------GA-A--------------A
i Psammomys_obesus.NESX01036367.1                        C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14146 14 +     25061 tgagacaaa----a-------ta-a--------------a
i Pteronura_brasiliensis.PteBra_flattened_line_42152     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20305819 14 -  38429054 agagactag----a-------tg-a--------------a
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             40369 14 -     91421 cgagactgg----a-------ca-g--------------a
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7634549 14 +   7812017 CGAGACTGG----A-------CA-G--------------A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             40411 14 -     72585 cgagactgg----a-------ca-g--------------a
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31134 14 +     55207 ctagactgg----A-------TT-C--------------A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53606056 14 +  90668790 TAAtgttga----a-------ga-a--------------a
i Rattus_norvegicus.chr16                                C 0 I 4
s Rhinopithecus_bieti.k119_188731                            15617 14 -     21983 CGAGACTGG----A-------CA-G--------------A
i Rhinopithecus_bieti.k119_188731                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91261986 14 - 195417433 CGAGACTGG----A-------CA-G--------------A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7701077 14 +   7961872 cgagactgg----a-------ca-g--------------a
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1193 14 -      3450 ctaggctgg----a-------tt-a--------------a
i Saiga_tatarica.SaiTat_scaffold_455678                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119968372 14 - 121099817 TGAGACCAG----A-------CA-G--------------G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40664 14 +     46362 TGAGACCAG----A-------CA-G--------------G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               40724 14 +     45824 TGAGACCAG----A-------CA-G--------------G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             57392 14 -     64574 TGAGACCAG----A-------CA-G--------------G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                              20486 14 -     23631 TGAGACCAG----A-------CA-G--------------G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 40650 14 -     61129 TGAGACCAG----A-------CA-G--------------G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5443697  9 -   5703754 TGAGACCAG-------------------------------
i Sapajus_apella.ctg103                                  I 1849 T 1844
s Sapajus_macrocephalus.k141_351809                          72933 14 -     80660 TGAGACCAG----G-------CA-G--------------G
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    176969 14 -    313613 caagaccag----a-------ta-a--------------a
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1705875                         5617 14 +     17286 CGAGACTGG----A-------CA-G--------------A
i Semnopithecus_entellus.k141_1705875                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                       5742 14 -     58920 CGAGACTGG----A-------CA-G--------------A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                            5650 14 +     45317 CAAGACTGG----A-------CA-G--------------A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_960425                             5763 14 +      9426 CAAGACTGG----A-------CA-G--------------A
i Semnopithecus_priam.k141_960425                        C 0 C 0
s Semnopithecus_schistaceus.k141_972136                       5656 14 +     24620 CGAGACTGG----A-------CA-G--------------A
i Semnopithecus_schistaceus.k141_972136                  C 0 C 0
s Semnopithecus_vetulus.k141_654052                           1586 14 -      5251 CAAGACTGG----A-------CG-G--------------A
i Semnopithecus_vetulus.k141_654052                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                     4369 12 -     77746 TGATGCAGA----T-------GA-----------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 5
s Solenodon_paradoxus.SolPar_flattened_line_126              23053 14 +   1910179 GGAGACTGG----A-------CA-A--------------A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13682188 14 -  18376816 GTCAACTTG----A-------CA-G--------------A
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1975989 14 -   3870691 TGGCACTGC----A-------GT-G--------------A
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             58932 13 +     97271 taagaca-a----a-------ta-a--------------a
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              47906  8 -    196729 agagatgg--------------------------------
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 1
s Sus_scrofa.CM000828.4                                   63022674 14 -  69701581 caagacagg----a-------tt-a--------------a
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1105155 14 -   1523678 cgagaccgg----a-------ta-g--------------a
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93702 20 +    116680 --------g----a-------tg-aggtgggataatacag
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138534 14 -    156842 gaagactgg----a-------ta-a--------------a
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    407006 14 +    539355 gaagactgg----a-------ta-a--------------a
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               50431 14 +     70052 tgagactgc----a-------ta-a--------------g
i Tarsius_lariang.k141_2201908                           C 0 I 4
s Tarsius_wallacei.k141_722827                               14823 14 +     18080 TGAGACTGC----A-------TA-A--------------G
i Tarsius_wallacei.k141_722827                           C 0 I 4
s Theropithecus_gelada.CM009954.1                        186466132 14 + 186847797 CGAGACTGG----A-------TA-G--------------A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_41106                    5673  6 +     27660 --------G----G-------CG-G--------------G
i Tolypeutes_matacus.TolMat_scaffold_41106               C 0 C 0
s Trachypithecus_auratus.k141_95322                          12132 14 -     15799 CAAGACTGG----A-------CA-G--------------A
i Trachypithecus_auratus.k141_95322                      C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     25499 14 +     78344 CAAGACTGG----A-------CA-G--------------A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_581431                       12303 14 -     15970 CAAGACTGG----A-------CA-G--------------A
i Trachypithecus_cristatus.k141_581431                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      11265 14 +     62838 CAAGACTGG----A-------CA-G--------------A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_119873                            12230 14 -     17556 CAAGACTGG----A-------CA-G--------------A
i Trachypithecus_geei.k141_119873                        C 0 C 0
s Trachypithecus_germaini.k141_545543                        12244 14 -     15912 CAAGACTGG----A-------CA-G--------------A
i Trachypithecus_germaini.k141_545543                    C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      11194 14 +     64340 CAAGACTGG----A-------CA-G--------------A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          12193 14 +     63452 CAAGACTGG----A-------CA-G--------------A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_283481                   11268 14 +     21341 CAAGACTGG----A-------CA-G--------------A
i Trachypithecus_leucocephalus.k141_283481               C 0 C 0
s Trachypithecus_melamera.k141_261742                         1330 14 +     11697 CAAGACTGG----A-------CA-G--------------A
i Trachypithecus_melamera.k141_261742                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                        13111 14 +     33539 CAAGACTGG----A-------CA-G--------------A
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5964939 14 +   6242583 CAAGACTGG----A-------CA-G--------------A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_583962                        13027 14 +     14028 CAAGACTGG----A-------CA-G--------------A
i Trachypithecus_pileatus.k141_583962                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                     4827 14 +    200418 caagaccag----a-------tt-a--------------a
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            4313646  1 +  10818551 ---------------------------------------A
i Trichechus_manatus.JH594705.1                          I 4 C 0
s Tursiops_truncatus.MRVK01000835.1                       15765503 14 +  33153633 caagactgg----a-------tt-a--------------a
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     801 14 +     21056 tgagactag----a-------ta-a--------------a
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 7
s Ursus_maritimus.KK499267.1                               4878242 21 -   5085361 tgaaacaaa----ataaaaaata-a--------------a
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  31648 14 +     50397 tgaggccag----a-------tg-a--------------a
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1100575                              6737 14 +     25465 tgaggccag----a-------tg-a--------------a
i Varecia_variegata.k141_1100575                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5390021  8 -   5488506 caagactg--------------------------------
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 42771 14 -     43706 agagatgag----a-------ta-a--------------a
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                         24630 14 +    224448 TGACACTAC----A-------GT-A--------------A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29836 14 +     86975 tgagacaaa----a-------ta-a--------------a
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      38799 13 +     63895 TGACA-TGG----A-------GA-A--------------A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 4
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21650 14 -     22999 caagattgg----a-------tt-a--------------a
i Ziphius_cavirostris.ZipCav_flattened_line_16896        C 0 C 0
e Erinaceus_europaeus.JH835339.1                           3365133 123 -   7059049 I
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Desmodus_rotundus.KZ672289.1                             8650437  3 +  20541912 I
e Otolemur_garnettii.GL873799.1                             738064 15 -   1103335 I
e Otolemur_crassicaudatus.k141_187572                         4411 15 -      5557 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827818  0 + 199412804 C
e Nycticebus_coucang.k141_921975                              9471  0 +     15238 C
e Nycticebus_bengalensis.LG01                            102653329  0 - 196305487 C
e Galagoides_demidoff.k141_1153324                           11777  0 +     12379 C
e Galago_senegalensis.k141_991736                             1874 15 -     22493 I
e Galago_moholi.ctg3793                                        758 15 +    137831 I
e Carollia_perspicillata.CarPer_scaffold_737331                421  3 -       918 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                 26946  3 +     43469 I
e Tonatia_saurophila.TonSau_scaffold_294                    103728  3 +    610378 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                31530  0 +     41958 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17424  0 +    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                        389332  0 -   3329780 C
e Pteropus_vampyrus.KN525825.1                             1390053  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              23005967  0 +  28871421 C
e Pteronotus_parnellii.KE854991.1                             1663  0 -     11709 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 162106  0 -    366855 C
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_39861                18895  3 -     30105 I
e Megaderma_lyra.MegLyr_scaffold_4542                        36015  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                 24123  0 +    270270 C
e Hipposideros_galeritus.HipGal_scaffold_65612                9129  0 -     20285 C
e Hipposideros_armiger.JXIK01000431.1                       132216  0 +   1711038 C
e Eidolon_helvum.KE797349.1                                  19343  0 -     31197 C
e Craseonycteris_thonglongyai.CraTho_scaffold_153350           127  2 +      5041 I
e Anoura_caudifer.AnoCau_scaffold_1412                      209496  3 +    412891 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11154 17 +     36723 A----TA----G-G----AGC-AG------GTC---C----TT---------G
s Acinonyx_jubatus.LLWD01001279.1                           836431 23 +   1699592 a----ca----g-gcaggggc-ag------atc--ac----a--------cag
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     10703  8 -     63021 A----AA----A-G----AGA--------------------------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 4 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538373 23 -  29979442 a----ca----g-gcaggtac-ag------atc--ac----a--------cag
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            107816 22 -    347723 a----ca----g-gcaggtac-ag------atc--ac----a---------cg
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                     1383 19 +     61208 A----CA----A-A----AAC-AG------ATC---A----T----GC--A-G
i Allactaga_bullata.AllBul_scaffold_20030                I 4 C 0
s Allenopithecus_nigroviridis.k141_3361533                   40716 19 -     52922 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          7038 16 +     11307 A----TA----G-C----AGC-TG------GTC---C----TC----------
i Allochrocebus_lhoesti.k141_1932296                     C 0 I 3
s Allochrocebus_preussi.k141_499905                           7210 16 -     13300 a----ta----g-c----agc-cg------gTC---C----TC----------
i Allochrocebus_preussi.k141_499905                      C 0 I 3
s Allochrocebus_solatus.k141_139760                           9091 16 +     12926 a----ta----g-c----agc-cg------gTC---C----TC----------
i Allochrocebus_solatus.k141_139760                      C 0 I 3
s Alouatta_belzebul.k141_3560514                             31755 19 +     51355 a----ta----c-g----agc-ag------att---g----tC--TT-----G
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               24901 19 -     36483 a----ta----g-g----agc-ag------atc---a----tC--TT-----A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              7006 19 -     13496 a----ta----c-g----agc-ag------att---g----tC--TT-----G
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23788 19 +     27940 A----TA----G-G----AGC-AG------ATC---A----TC--TT-----G
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15596 19 -     39310 A----TA----G-G----AGC-AG------ATC---A----TC--TT-----A
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            23854 19 +     30492 a----ta----g-g----agc-ag------atc---a----tC--TT-----A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28085 19 +     47717 a----ta----g-g----agc-ag------att---g----tC--TT-----G
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_2029433                            79057 19 +     87306 a----ta----g-g----agc-ag------atc---g----tC--TT-----G
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             39039 19 +     50774 A----TA----G-G----AGC-AG------ATC---A----TC--TT-----G
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707770 23 -   2318259 a----ca----g-gcagtggc-ag------atc--tt----g--------agg
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303             27000 23 -     32520 A----CA----G-GCAGAGGC-AG------ATC-T-T----G-------G-GG
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_2596348                                   5287 19 +     12024 a----ca----g-a----agC-AC------ATC---G----TC--TT-----G
i Aotus_azarae.k141_2596348                              C 0 C 0
s Aotus_griseimembra.k141_2227177                             4953 19 -     10972 a----ca----g-a----agC-AC------ATT---G----TC--TT-----G
i Aotus_griseimembra.k141_2227177                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4333414 19 -   5030052 A----CA----G-A----AGC-AC------ATC---G----TC--TT-----G
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_1801223                              5346 19 -     12698 a----ca----g-a----agc-ac------atc---g----tc-------ttg
i Aotus_trivirgatus.k141_1801223                         C 0 C 0
s Aotus_vociferans.k141_506037                                4806 19 -     11998 a----ca----g-a----agC-AC------ATC---G----TC--TT-----G
i Aotus_vociferans.k141_506037                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22197 19 +     39421 a----ta----g-g----tgc-ag------ctc---a----t-------gcaa
i Aplodontia_rufa.AprRuf_scaffold_37633                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       14285 13 +     45910 -------------------GC-AA------ATC---A----TGCA-------G
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21232050 19 -  21539123 a----ta----g-g----agc-ag------atc---g----tC--TT-----G
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3122 19 -     48076 a----ta----g-g----agc-ag------atc---g----tC--TT-----G
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18588 19 -     22344 a----ta----g-g----agc-ag------atc---g----tC--TT-----G
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31644 19 -     89868 a----ta----g-g----agc-ag------atc---g----tC--TT-----G
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36057 19 -     40414 a----ta----g-g----agc-ag------atc---g----tC--TT-----G
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                43891 19 +     72325 a----ta----g-g----agc-ag------atc---a----tc-------ttg
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75646 23 -     92717 a----cagatgg-g----agc-ag------atc---g----tg-------tag
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              76229 23 +     85213 a----cagatgg-g----agc-ag------atc---g----tg-------tag
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222429 23 +  23207421 a----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4432 23 +     25979 a----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     12828 23 -    124022 A----CA----G-GCAATGGA-AG------ATC-T-T----G--A----G--G
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                    233006 23 -    288883 A----CA----G-GCAGTGGC-AG------ATC-T-T----G-------G-GG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20306381 23 +  48749331 a----ca----a-gcagtggc-ag------atc--tt----g--------ggg
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1159483 23 -   1948126 a----ca----a-gcagtggc-ag------atc--tt----g--------ggg
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18116593 23 +  45695690 a----ca----a-gcagtggc-ag------atc--tt----g--------ggg
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2852048 23 +   4408762 A----CA----G-GCAGTGGC-AG------ATC-T-T----G-------G-GG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                116914 19 -    122966 A----CG----G-G----AGC-AG------ATC---G----TC--TT-----G
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76392 19 +     81800 A----CG----G-G----AGC-AG------ATC---G----TC--TT-----G
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45597 19 -     95584 A----CG----G-G----AGC-AG------ATC---G----TC--TT-----G
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69692 19 -    119600 a----cg----g-g----agc-ag------atc---g----tC--TT-----G
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020417 23 -  17673402 a----ca----g-gcagaggc-ag------atc--ct----g--------aag
i Camelus_bactrianus.KN276810.1                          I 1 C 0
s Camelus_dromedarius.KN272107.1                           2353247 23 -   7040546 a----ca----g-gcagaggc-ag------atc--ct----g--------aag
i Camelus_dromedarius.KN272107.1                         I 1 C 0
s Camelus_ferus.KB017975.1                                  421506 23 -   1652518 a----ca----g-gcagaggc-ag------atc--ct----g--------aag
i Camelus_ferus.KB017975.1                               I 1 C 0
s CanFam4.chr16                                           17831708 23 -  60362399 a----ca----a-gcaggtac-ag------atc--ac----a--------tag
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32452 23 -     43241 a----ca----a-gcaggtac-ag------atc--ac----a--------tag
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067176 23 -   9314153 a----ca----a-gcaggtac-ag------atc--ac----a--------tag
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17991835 23 -  59632846 a----ca----a-gcaggtac-ag------atc--ac----a--------tag
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18532941 23 +  63665305 a----ca----a-gcaggtac-ag------atc--ac----a--------tag
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18861833 23 +  46296322 A----CA----G-GCAGTGGC-AG------ATC-T-T----G--A----G--G
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18092551 23 -  44709034 A----CA----G-GCAGTGGC-AG------ATC-T-T----G--A----G--G
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           179872 19 -    496798 A----CA----G-G----AGC-AG------ATG---G----TGCA-------G
i Carlito_syrichta.NW_007259797.1                        I 4 C 0
s Castor_canadensis.CasCan_scaffold_2074                    167100 19 +    179628 A----CA----C-A----AGC-AG------AGC---C----T--A--C--A-G
i Castor_canadensis.CasCan_scaffold_2074                 I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                    113384 23 +    217609 a----ta----g-gcaggggc-ag------atc--tt----g--A-----A-G
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebus_albifrons.Contig27                                25675536 19 +  26074798 a----ca----g-g----agc-ag------atc---g----tc-------ttg
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               22004 19 +     28840 a----ca----g-g----agc-ag------atc---g----tC--TT-----G
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7675 19 +     13997 a----ca----g-g----agc-ag------atc---g----tC--TT-----G
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29797 19 +     31688 A----CA----T-G----AGC-AG------ATG---G----TGCA-------G
i Cephalopachus_bancanus.k141_1423433                    I 4 C 0
s Ceratotherium_simum.JH767749.1                          12257215 23 +  27778364 a----ta----g-gcaggggc-ag------atc--gt----g--------cag
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          2922 23 +     15641 a----ta----g-gcaggggc-ag------atc--gt----g--------cag
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4501690 19 +   4669795 A----TA----G-C----AGC-GG------GTC---C----TC--TT-----G
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_2766003                       22962 19 -     30935 A----TA----G-C----AGC-GG------GTC---C----TC--TT-----G
i Cercocebus_chrysogaster.k141_2766003                   C 0 C 0
s Cercocebus_lunulatus.k141_245046                            7364 19 +     18174 A----TA----G-C----AGC-GG------GTC---C----TC--TT-----G
i Cercocebus_lunulatus.k141_245046                       C 0 C 0
s Cercocebus_torquatus.k141_4063387                           7201 19 +     18249 A----TA----G-C----AGC-GG------GTC---C----TC--TT-----G
i Cercocebus_torquatus.k141_4063387                      C 0 C 0
s Cercopithecus_ascanius.k141_4281816                         2320 19 -      5884 A----TA----G-C----AGC-AG------GTC---C----TC--T-C----G
i Cercopithecus_ascanius.k141_4281816                    C 0 C 0
s Cercopithecus_cephus.k141_1630443                           1344 19 +      4620 A----TA----G-C----AGC-AG------GTC---C----TC--T-C----G
i Cercopithecus_cephus.k141_1630443                      C 0 C 0
s Cercopithecus_diana.k141_488174                             7780 19 +     10982 A----TA----G-C----AGC-AG------GTC---C----TC--T-C----G
i Cercopithecus_diana.k141_488174                        C 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1326 19 +      4810 A----TA----G-C----AGC-AG------GTC---C----TC--T-C----G
i Cercopithecus_hamlyni.k141_1302205                     C 0 C 0
s Cercopithecus_lowei.k141_4082698                            7242 19 +     34178 A----TA----G-C----AGC-AG------GTC---C----TC--T-C----G
i Cercopithecus_lowei.k141_4082698                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38849352 19 +  39242232 a----TA----G-C----AGC-AG------GTC---C----TC--T-C----G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21252952 19 -  21565898 A----TA----G-C----AGC-AG------GTC---C----TC--T-C----G
i Cercopithecus_mona.ctg39                               C 0 I 5
s Cercopithecus_neglectus.k141_557928                         7408 19 -     18401 A----TA----G-C----AGC-AG------GTC---C----TC--T-C----G
i Cercopithecus_neglectus.k141_557928                    C 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7471 19 -     15013 A----TA----G-C----AGC-AG------GTC---C----TC--T-C----A
i Cercopithecus_nictitans.k141_1200139                   C 0 C 0
s Cercopithecus_petaurista.k141_365908                        7442 19 +     11214 A----TA----G-C----AGC-AG------GTC---C----TC--T-C----G
i Cercopithecus_petaurista.k141_365908                   C 0 C 0
s Cercopithecus_pogonias.k141_391400                          2262 19 -     13831 A----TA----G-C----AGC-AG------GTC---C----TC--T-C----G
i Cercopithecus_pogonias.k141_391400                     C 0 C 0
s Cercopithecus_roloway.k141_1248991                         27436 19 +     68532 a----TA----G-C----AGC-AG------GTC---C----TC--T-C----G
i Cercopithecus_roloway.k141_1248991                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             498 13 -      1897 G----CA----G-G----AAC-AC------AT----A----------------
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       C 0 C 0
s Cheirogaleus_major.k141_333249                             43637 23 -     52598 a----cagacag-g----agc-ag------atc---g----tg-------cag
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           38968 23 +     57038 a----cagacag-g----agc-ag------atc---g----tgcA-------G
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Cheracebus_lucifer.k141_49986                               9812 19 -     17098 A----CG----G-G----CGC-AG------GTC---G----TC--TT-----G
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9682 19 +     17877 A----CG----G-G----CGC-AG------GTC---G----TC--TT-----G
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167249 19 -    216457 a----cg----g-g----cgc-ag------gtc---g----tC--TT-----G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71722 19 +     76511 A----CG----G-G----CGC-AG------GTC---G----TC--TT-----G
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          113939 19 +    146308 a----cg----g-g----agc-ag------atc---g----tC--TT-----G
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          45847 19 -     50570 A----CG----G-G----AGC-AG------ATC---G----TC--TT-----G
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455220 16 -  18827391 a----ta----g-c----agc-cg------gTC---C----TC----------
i Chlorocebus_aethiops.ctg25                             C 0 I 3
s Chlorocebus_pygerythrus.k141_1025673                       41163 16 -     50209 a----ta----g-c----agc-cg------gTC---C----TC----------
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 3
s Chlorocebus_sabaeus.CM001947.1                         135448145 16 + 135778131 A----TA----G-C----AGC-CG------GTC---C----TC----------
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 3
s Choloepus_didactylus.ChoDid_scaffold_22546                   719 19 -     25429 G----CA----G-G----AAC-AC------ATT---G----TGCA-------G
i Choloepus_didactylus.ChoDid_scaffold_22546             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            195847 19 +    839153 g----ca----g-g----aac-ac------att---g----tg-------cag
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               6539 19 -      9651 g----gc----a-g----gGC-AG------ACc---a----ta-------cag
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          I 1 I 153
s Colobus_angolensis.KN981557.1                            1936086 19 +   2368649 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199970064 19 + 200372422 a----ta----g-c----agc-ag------gtc---c----tc-------gtg
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              58378 19 +     84244 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17566291  5 -  53390261 A----CA----G-G---------------------------------------
i Condylura_cristata.JH655891.1                          C 0 I 8
s Cricetomys_gambianus.CriGam_scaffold_14425                 16606 19 +     83289 A----AA----A-G----AGC-AG------ATC---A----C--AT----A-G
i Cricetomys_gambianus.CriGam_scaffold_14425             I 4 C 0
s Cricetulus_griseus.LT883664.1                           11697238 19 + 224834208 a----aa----a-g----agc-ag------acc---a----C--AT----A-G
i Cricetulus_griseus.LT883664.1                          I 4 C 0
s Crocidura_indochinensis.CroInd_scaffold_123729              8631 31 -      9007 G----TA----G-A-TTTGCT-GAGG--TTGTG---G----C-CATTC-CAAA
i Crocidura_indochinensis.CroInd_scaffold_123729         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59148 23 -     87169 a----ca----g-gcaggtGC-AG------ATTA--C----A-CA-------G
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 1 C 0
s Dasypus_novemcinctus.JH564415.1                            92301 14 +   2246927 A----CA----G-G----AGC-AT------CTC---A----------------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12562401 19 -  12879189 a----ca----g-g----agc-ag------atc---a----tg-------cag
i Daubentonia_madagascariensis.ctg71                     I 2 C 0
s Delphinapterus_leucas.KZ290073.1                        16841580 23 +  35494412 a----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  699010 23 +   1390856 a----ta----g-gcaggggc-ag------atc--gt----g--------cag
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                   31813 23 +    198055 a----ta----g-gcaggggc-ag------atc--gt----g--------cag
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18914637 14 +  37912305 ------------------TGC-Ag------gtc---c----t-------gaag
i Dipodomys_ordii.KN672350.1                             I 3 C 0
s Dipodomys_stephensi.DipSte_scaffold_47531                  13235 14 -     26976 ------------------TGC-AG------GTC---C----T-------GAAG
i Dipodomys_stephensi.DipSte_scaffold_47531              I 3 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       342007 23 +    607251 A----CA----G-GCAGCGGC-AG------ATC-T-T----G-------G-GG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          47637 19 -    110024 a----aa----a-g----agc-aa------ACC---A----C--AT----A-G
i Ellobius_lutescens.LOEQ01008920.1                      I 5 C 0
s Ellobius_talpinus.LOJH01050844.1                            8888 19 +     12610 a----aa----a-g----aac-AG------ACC---T----C--AT----A-G
i Ellobius_talpinus.LOJH01050844.1                       I 5 C 0
s Enhydra_lutris.KZ291758.1                               16365713 23 -  41312741 a----aa----g-gcaggtac-ag------atc--ag----a--------cag
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1310319 23 +   4378816 a----ca----g-gtatgggc-ag------atc--gt----a--------cag
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18557787 23 -  39960074 a----ca----g-gtatgggc-ag------atc--gt----a--------cag
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               59828 23 +    498745 a----ca----g-gtatgggc-ag------atc--gt----a--------cag
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21237426 19 -  21539334 a----ta----g-c----agc-cg------gTC---C----TC--TT-----G
i Erythrocebus_patas.Contig38                            C 0 T 2220
s Eschrichtius_robustus.EscRob_flattened_line_8968           40762 23 +    133382 a----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5055 23 -     25849 a----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_1869827                             12754 23 -     21348 a----caggcag-g----agc-ag------ata---g----tacA-------G
i Eulemur_albifrons.k141_1869827                         C 0 C 0
s Eulemur_collaris.k141_601111                                9956 23 +     70999 a----caggcag-g----agc-ag------atc---g----ta-------cag
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                               7695 23 -    112731 a----caggcag-g----agc-ag------ata---g----ta-------cag
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                              6705 23 -     68309 a----caggcag-g----agc-ag------atc---g----ta-------cag
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_2627385                                 3841 23 -      9374 a----caggcag-g----agc-ag------atc---g----ta-------cag
i Eulemur_fulvus.k141_2627385                            C 0 C 0
s Eulemur_macaco.k141_1562045                                32936 23 +     75513 a----caggcag-g----agc-ag------atc---g----ta-------cag
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 30820 23 +     97555 a----caggcag-g----agc-ag------atc---g----tacA-------G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            7476 23 -     30972 a----caggcag-g----agc-ag------atc---g----ta-------cag
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_1120150                                  7353 23 +     16616 a----caggcag-g----agc-ag------ctc---g----ta-------cag
i Eulemur_rufus.k141_1120150                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              33938 23 +    111500 a----caggcag-g----agc-ag------ata---g----ta-------cag
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20267585 23 + 206538554 a----ca----g-gcaggggc-ag------atc--ac----a--------cag
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20226363 23 + 205367284 a----ca----g-gcaggggc-ag------atc--ac----a--------cag
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  3373 23 -     25330 A----CA----G-GCAGGGGC-AG------ATCA--C----A-CA-------G
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Galago_moholi.ctg3793                                        773 12 +    137831 --------------------C-AA------ATC---A----TGCA-------G
i Galago_moholi.ctg3793                                  I 15 C 0
s Galago_senegalensis.k141_991736                             1889 12 -     22493 --------------------C-AA------ATC---A----TGCA-------G
i Galago_senegalensis.k141_991736                        I 15 C 0
s Galagoides_demidoff.k141_1153324                           11777 12 +     12379 --------------------C-AA------ATC---A----TGCA-------G
i Galagoides_demidoff.k141_1153324                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_75343               15833 23 -     17176 atacaca----g-g----agc-ag------atc---a----tg-------cag
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     636864 23 -    660261 A----CA----G-GCAGTGGC-AG------ATC-T-T----A-------G-GG
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_149316                            5030 19 +      8016 A----CA----G-G----AGC-AG------ATC---C----T----GC--A-G
i Glis_glis.GliGli_scaffold_149316                       I 4 C 0
s Gorilla_beringei.k141_179627                                 921 19 +      1068 a----ta----g-g----agC-AG------GTC---C----TC--TT-----G
i Gorilla_beringei.k141_179627                           C 0 I 20
s Gorilla_gorilla.CYUI03001204.1                             39770 19 -     63219 a----ta----g-g----agC-AG------GTC---C----TC--TT-----G
i Gorilla_gorilla.CYUI03001204.1                         I 60 I 49
s Graphiurus_murinus.GraMur_scaffold_10447                   54781 19 +     78134 A----CA----G-G----AGC-AG------ATC---C----T--GT---G--G
i Graphiurus_murinus.GraMur_scaffold_10447               I 4 C 0
s Hapalemur_alaotrensis.k141_330369                           7350 23 +     40692 a----cagacag-g----agc-ag------atc---a----tg-------cag
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_435261                             17038 23 +     22537 a----cagacag-g----agc-ag------atc---a----tg-------cag
i Hapalemur_gilberti.k141_435261                         C 0 C 0
s Hapalemur_griseus.k141_679418                              15685 23 -     28566 a----cagacag-g----agc-ag------atc---a----tg-------cag
i Hapalemur_griseus.k141_679418                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         14417 23 +     42923 a----cagacag-g----agc-ag------atc---a----tg-------cag
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17672 23 +     53142 a----cagacag-g----agc-ag------atc---a----tg-------cag
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               272834 23 +    327341 A----CA----G-GCGGGTGC-AG------ATT--GC----A-CA-------G
i Helogale_parvula.HelPar_flattened_line_2585            I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14553 23 -     48891 a----ca----g-gcagtggc-ag------atc--tt----g--------agg
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10242 19 -     15841 G----CT----G-G----GGC-AG------GCT---G----CAC---C----A
i Heterohyrax_brucei.HetBruBak_scaffold_90013            I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6450 23 +     36432 a----ta----g-acaggggc-ag------atc-T-T----A--A--C----G
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hoolock_leuconedys.ctg274                                    460451 19 +    630532 a----ta----g-g----agc-ag------gTC---C----TC--TT-----G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   8515 17 -     22022 A----CA----G-GCAGGTGC-AG------ATT--------------------
i Hyaena_hyaena.HyaHya_flattened_line_62789              I 1 I 1
s Hylobates_agilis.k141_967383                                1720 19 -      4846 A----TA----G-G----AGC-AG------GTC---C----TC--TT-----G
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                178 19 -      8919 A----TA----G-G----AGC-AG------GTC---C----TC--TT-----G
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555149 19 - 191637585 a----ta----g-g----agC-AG------GTC---C----TC--TT-----G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3348036 19 -  11177569 a----ta----g-g----agC-AG------GTC---C----TC--TT-----G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543754 19 -   7955117 A----TA----g-g----agc-ag------ctc---a----t-------gcga
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_1997670                                    2177 23 +      8453 a----cagacgg-g----agc-ag------atc---g----tg-------cag
i Indri_indri.k141_1997670                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29172 23 -     31341 a----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8298648 19 -   9596543 A----CA----A-A----AAC-AG------ATC---A----T----GC--A-T
i Jaculus_jaculus.JH725527.1                             I 4 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                  4923 23 +     97402 a----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         33121 19 -     38430 a----ta----g-g----agc-ag------att---g----tC--TT-----G
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544346 15 -  30322482 -------------g----agc-ag------acc---a----tg-------cag
i Lemur_catta.scaffold_24                                I 7 C 0
s Lepilemur_ankaranensis.k141_2922                            8722 23 -     24677 a----cagacag-g----agc-ag------atc---a----tg-------cag
i Lepilemur_ankaranensis.k141_2922                       C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4691 23 -     31569 a----cagacag-g----agc-ag------att---a----tg-------cag
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                         22753 23 +     25010 a----cagacag-g----agc-ag------atc---a----tg-------cag
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      48307 23 +     54090 a----cagacag-g----agc-ag------atc---a----tg-------cag
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3074433 23 +   3914936 a----ca----g-ccatgtac-ag------atc--ac----a--------cag
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_57262                     12873 19 -     23961 a----ta----g-g----acc-ag------atc---c----tg-------cag
i Lepus_americanus.LepAme_scaffold_57262                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             299089 23 -    662738 a----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1464682 19 +   1826925 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2958567                            3778 13 -     22734 -------------------GT-AA------GTC---A----CACA-------G
i Loris_lydekkerianus.k141_2958567                       C 0 C 0
s Loris_tardigradus.ctg83                                  1061206 13 +   6120653 -------------------GT-AA------GTC---A----CACA-------G
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17988075 23 -  59628241 a----ca----a-gcaggtac-ag------atc--ac----a--------tag
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              32938 19 +     40492 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59702863 19 +  60120075 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_794849                                 7057 19 +      8714 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Macaca_cyclopis.k119_794849                            C 0 C 0
s Macaca_fascicularis.k141_814140                           107491 19 -    114318 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_943731                                  7302 19 +     13165 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Macaca_fuscata.k119_943731                             C 0 C 0
s Macaca_leonina.k141_2438370                                12675 19 -     14632 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Macaca_leonina.k141_2438370                            C 0 C 0
s Macaca_maura.k141_515834                                   12833 19 +     14712 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Macaca_maura.k141_515834                               C 0 C 0
s Macaca_mulatta.NC_041758.1                             186866872 19 + 187317192 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25491987 19 -  25927173 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_128247                                   20303 19 +     98240 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Macaca_nigra.k141_128247                               C 0 C 0
s Macaca_radiata.k141_3254723                                 5845 19 +     10028 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Macaca_radiata.k141_3254723                            C 0 C 0
s Macaca_siberu.k141_1929020                                  7097 19 -      9047 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Macaca_siberu.k141_1929020                             C 0 C 0
s Macaca_silenus.Contig273                                  358106 19 -    668171 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_596453                                 1478 19 -      5469 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Macaca_thibetana.k99_596453                            C 0 C 0
s Macaca_tonkeana.k141_683787                                 7316 19 +      9199 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Macaca_tonkeana.k141_683787                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961758 19 -  24302211 a----CA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               377511 19 +    752769 a----CA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              40165 23 +    737560 a----tg----g-gcaggggc-ag------atc--at----g--------cag
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              72336 23 -    317179 a----tg----g-gcaggggc-ag------atc--at----g--------cac
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33124821 19 -  40650429 A----TA----g-g----agc-ag------ctc---a----t-------gcaa
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23252 23 +     74585 a----aa----g-gcagatac-ag------atc--ag----a--------cag
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 66038 15 +    140813 -------------G----TGC-AG------ACC---A----C--A--C--A-G
i Meriones_unguiculatus.MerUng_scaffold_7390             I 3 C 0
s Mesocricetus_auratus.KB708134.1                         12212341 19 -  29670104 a----aa----a-g----agc-ag------acc---a----C--AT----A-G
i Mesocricetus_auratus.KB708134.1                        I 4 C 0
s Mesoplodon_bidens.MesBid_scaffold_74495                     4898 23 -     19186 g----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Mesoplodon_bidens.MesBid_scaffold_74495                C 0 C 0
s Microcebus_murinus.CM007674.1                           18313305 26 -  93316391 A----TAGATAA-G----AGT-AG------ATCATCG----TG--T----A-G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_791330                           1629 19 -     13566 A----TA----G-C----AGC-AG------GTC---C----TC--T----A-G
i Miopithecus_ogouensis.k141_791330                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        24873 23 +     26817 A----CA----G-CCATGTAC-AG------ATCA--C----A-CA-------G
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    56826 23 -    437263 a----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32007 22 +     82753 -----ca----g-gtagcagc-ag------atc--tt----g--------ggg
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21414 23 +     63510 A----CA----G-GCAGGTGC-AG------ACT--GC----A-CA-------G
i Mungos_mungo.MunMun_flattened_line_18455               I 1 C 0
s Mus_pahari.LT608297.1                                   31390813 19 -  89631738 c----aa----a-g----agc-AC------ACC---A----A--AT----A-G
i Mus_pahari.LT608297.1                                  I 4 C 0
s Muscardinus_avellanarius.MusAve_scaffold_74954             15338 19 -     17106 A----CA----G-G----AGC-AG------ACC---C----T----GC--A-G
i Muscardinus_avellanarius.MusAve_scaffold_74954         I 4 C 0
s Mustela_putorius.JH418006.1                               330465 23 -  14710649 a----aa----g-gcaggtac-ag------atc--ag----a--------cag
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14207 19 -     28317 g----ca----g-g----agc-ac------atc---g----tg-------cag
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 C 0
s Nasalis_larvatus.k141_970469                               18488 19 +     37058 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Nasalis_larvatus.k141_970469                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343426 23 +  31847680 a----ca----g-ccatgtac-ag------atc--ac----a--------cag
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5894878 23 +   7148211 a----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9181965 23 -   9404916 a----ca----a-gcaggtac-ag------atc--ac----a--------tag
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102653329  4 - 196305487 ------------------------------------------GCA-------G
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_921975                              9471  4 +     15238 ------------------------------------------GCA-------G
i Nycticebus_coucang.k141_921975                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827818  4 + 199412804 ------------------------------------------GCA-------G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              533976 23 -   2017862 a----ca----g-ccatgtac-ag------atc--ac----a--------cag
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         168676 23 +    630418 A----CA----G-GCAGCGGC-AG------ATC-T-T----G-------G-GG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107557 23 -    150152 A----CG----G-GCAGCGGC-AG------ATC-T-T----G-------G-GG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25188 19 +    140218 A----AA----A-G----AGC-AG------ACC---A----C--AT----A-G
i Ondatra_zibethicus.OndZib_scaffold_7387                I 4 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                   12346 19 +     41509 A----AA----A-G----ATC-AG------ACC---A----C--AT----A-G
i Onychomys_torridus.OnyTor_scaffold_28377               I 4 C 0
s Orcinus_orca.KB316932.1                                  2812104 23 -  10937097 a----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1738 20 -      4812 g----gc----atg----ggc-ag------gtc---a----tg-------cag
i Orycteropus_afer.OryAfe_flattened_line_327065          I 1 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190476 19 + 174332312 a----aa----g-g----agc-ag------atc---c----gg-------cag
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       495032 23 -    559221 a----ca----a-gcaggtac-ag------atc--ac----a--------tag
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_187572                         4426 12 -      5557 --------------------C-AA------ATC---A----TGCA-------G
i Otolemur_crassicaudatus.k141_187572                    I 15 C 0
s Otolemur_garnettii.GL873799.1                             738079 12 -   1103335 --------------------C-AA------ATC---A----CGCA-------G
i Otolemur_garnettii.GL873799.1                          I 15 C 0
s Ovis_aries.CM001607.2                                   17617486 23 +  44047080 a----ca----g-gcagtggc-ag------atc--tt----g--------agg
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1487 23 -     13921 A----CA----G-GCAGTGGC-AG------ATC-T-T----G--A----G--A
i Ovis_canadensis.OviCan_scaffold_75879                  C 0 C 0
s Pan_paniscus.KQ411608.1                                     3344 17 +     15831 A----TA----G-G----AGC-AG------GTC---C----TC---------T
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649158 17 + 189151597 A----TA----G-G----AGC-AG------GTC---C----TC---------T
i Pan_troglodytes.CM009242.2                             I 14 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  181234 23 +    230217 a----ca----g-gcaggggc-ag------atc--ac----a--------cag
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                296031 23 +  18783137 a----ca----g-gcaggggc-ag------atc--ac----a--------cag
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4751377 27 -   8748460 a----ca----g-gcaggggc-ag------atcA--CTGAAA-CA-------G
i Panthera_tigris.KE722367.1                             C 0 I 3
s Pantholops_hodgsonii.KE114653.1                          1296404 23 -   2937107 a----ca----g-gcagtggc-ag------atc--tt----g--------agg
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183469931 19 + 183742232 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_703094                              6269 19 -     17637 a----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Papio_cynocephalus.k141_703094                         C 0 C 0
s Papio_hamadryas.Contig39                                20592428 19 +  20919399 a----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  31693 19 +     41871 a----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_2087334                                    7276 19 -     13745 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Papio_papio.k141_2087334                               C 0 C 0
s Papio_ursinus.k141_4818248                                 14776 19 +     25215 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Papio_ursinus.k141_4818248                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42169 23 -     78924 a----ca----g-gcaggtgc-ag------atcA--C----A-CA-------G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1387561                          11708 13 +     15382 -------------------GC-AA------ATC---A----TGCA-------G
i Perodicticus_ibeanus.k141_1387561                      C 0 C 0
s Perodicticus_potto.k141_842195                             18258 13 -     21729 -------------------GC-AA------ATC---A----TGCA-------G
i Perodicticus_potto.k141_842195                         C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13510 13 +     28765 ------------------TGC-AG------GTC---C----T-------GA-G
i Perognathus_longimembris.PerPac_flattened_line_39705   I 3 C 0
s Peromyscus_maniculatus.KI615324.1                       18245102 19 -  18517816 a----aa----a-g----atc-aG------ACC---A----C--AT----A-G
i Peromyscus_maniculatus.KI615324.1                      I 191 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              38807 23 +     63832 a----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                           28728 19 -     55023 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64146 19 +     89929 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14237 19 -     40849 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326714 19 -  14605196 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                             19529 19 +     26961 a----cg----g-g----agc-ag------atc---g----tC--TT-----G
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15542 19 +     23417 a----cg----g-g----agc-ag------atc---g----tC--TT-----G
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19523 19 +     29694 a----cg----g-g----agc-ag------atc---g----tC--TT-----G
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44558 19 +     52772 a----cg----g-g----agc-ag------atc---g----tC--TT-----G
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19549 19 +     26198 a----cg----g-g----agc-ag------atc---g----tC--TT-----G
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3955884 19 +   4542175 a----cg----g-g----agc-ag------atc---g----tC--TT-----G
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19476 19 -     23490 a----cg----g-g----agc-ag------atc---g----tC--TT-----G
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           4975 23 -      7527 a----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Platanista_gangetica.PlaMin_flattened_line_175331      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       22250 19 -     39866 A----CG----G-G----CGC-AG------GTC---G----TC--T-C----G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        31408 19 +     34906 A----CG----G-G----CGC-AG------GTC---G----TC--T-C----G
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       35671 19 +     87950 A----CG----G-G----CGC-AG------GTC---G----TC--T-C----G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     36470 19 +     88961 A----CG----G-G----CGC-AG------GTC---G----TC--T-C----G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         22163 19 +     39403 A----CG----G-G----CGC-AG------GTC---G----TC--T-C----G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          35939 19 -     87928 A----CG----G-G----CGC-AG------GTC---G----TC--T-C----G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         42920 19 +     60166 A----CG----G-G----CGC-AG------GTC---G----TC--T-C----G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43113 19 +     67232 A----CG----G-G----CGC-AG------GTC---G----TC--T-C----G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38578 19 +     90634 A----CG----G-G----CGC-AG------GTC---G----TC--T-C----G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          35961 19 -     89403 A----CG----G-G----CGC-AG------GTC---G----TC--T-C----G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189181937 19 + 189387572 A----TA----G-G----AGC-AG------GTT---C----TC--TT-----G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9596831 19 +   9816681 A----TA----G-G----AGC-AG------GTT---C----TC--TT-----G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              18313 19 -     69807 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              11675 19 +     80239 a----ta----g-c----agc-ag------gtc---c----tc-------gtg
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_112514                11559 19 +     16234 G----CT----G-G----GGC-AG------GCC---G----CAC---C----G
i Procavia_capensis.ProCapCap_scaffold_112514            I 1 C 0
s Prolemur_simus.MPIZ01000396.1                            2616972 23 -   4620579 A----CAGACAG-G----AGC-AG------ATC---A----TGCA-------G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1013028 23 +   2598838 A----CAGACAG-G----AGC-AG------ATC---G----TGCA-------G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_114130                           9096 23 -     19127 a----cagacag-g----agc-ag------atc---g----tg-------caa
i Propithecus_coronatus.k141_114130                      C 0 C 0
s Propithecus_diadema.k141_599139                            10190 23 +     10533 a----cagacgg-g----agc-ag------att---g----tg-------cag
i Propithecus_diadema.k141_599139                        C 0 C 0
s Propithecus_edwardsi.k141_635656                             432 23 +     30655 a----cagacgg-g----agc-ag------att---g----tg-------cag
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_217725                            2624 23 +     14082 a----cagacgg-g----agc-ag------atc---g----tg-------cag
i Propithecus_perrieri.k141_217725                       C 0 C 0
s Propithecus_tattersalli.k141_790011                        50309 23 -     67325 a----cagacgg-g----agc-ag------atc---g----tg-------cag
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7102 23 -     35169 a----cagacag-g----agc-ag------atc---g----tg-------cag
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036367.1                            19304 15 -     31435 -------------G----TGC-AG------AAC---A----C--A--C--A-G
i Psammomys_obesus.NESX01036367.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14160 23 +     25061 a----aa----g-gcaggtac-ag------atc--ag----a--------cag
i Pteronura_brasiliensis.PteBra_flattened_line_42152     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20305833 23 -  38429054 a----ca----g-gcaggggc-ag------atc--ac----a--------cag
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             40383 19 -     91421 a----ta----g-c----agc-ag------gtc---c----tc-------gtg
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7634563 19 +   7812017 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             40425 19 -     72585 a----ta----g-c----agc-ag------gtc---c----tc-------gtg
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31148 23 +     55207 A----CA----G-GCAGTGGC-AG------ATC-T-T----G-------G-GG
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53606074 14 +  90668790 a----aa----a-g----agc-aC------ACC---A----------------
i Rattus_norvegicus.chr16                                I 4 C 0
s Rhinopithecus_bieti.k119_188731                            15631 19 -     21983 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Rhinopithecus_bieti.k119_188731                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91262000 19 - 195417433 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7701091 19 +   7961872 a----ta----g-c----agc-ag------gtc---c----tc-------gtg
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1207 23 -      3450 a----ca----g-gcagtggc-ag------atc--tt----g--------agg
i Saiga_tatarica.SaiTat_scaffold_455678                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119968386 19 - 121099817 A----CA----G-A----AGC-AC------ATC---G----TC--TT-----G
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40678 19 +     46362 A----CA----G-A----AGC-AC------ATC---G----TC--TT-----G
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               40738 19 +     45824 A----CA----G-A----AGC-AC------ATC---G----TC--TT-----G
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             57406 19 -     64574 A----CA----G-A----AGC-AC------ATC---G----TC--TT-----G
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                              20500 19 -     23631 A----CA----G-A----AGC-AC------ATC---G----TC--TT-----G
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 40664 19 -     61129 A----CA----G-A----AGC-AC------ATC---G----TC--TT-----G
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5441862 19 -   5703754 A----CA----G-G----AGC-AG------ATC---G----TC--TT-----G
i Sapajus_apella.ctg103                                  T 1844 I 1846
s Sapajus_macrocephalus.k141_351809                          72947 19 -     80660 A----CA----G-G----AGC-AG------ATC---G----TC--TT-----G
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    176983  5 -    313613 a----ca----a-g---------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 7
s Semnopithecus_entellus.k141_1705875                         5631 19 +     17286 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Semnopithecus_entellus.k141_1705875                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                       5756 19 -     58920 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                            5664 19 +     45317 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_960425                             5777 19 +      9426 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Semnopithecus_priam.k141_960425                        C 0 C 0
s Semnopithecus_schistaceus.k141_972136                       5670 19 +     24620 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Semnopithecus_schistaceus.k141_972136                  C 0 C 0
s Semnopithecus_vetulus.k141_654052                           1600 19 -      5251 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Semnopithecus_vetulus.k141_654052                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                     4386 19 -     77746 A----AA----A-G----AAC-AG------ACC---A----C--AT----A-G
i Sigmodon_hispidus.SigHis_scaffold_20193                I 5 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126              23067 21 +   1910179 A----CA----G-G-TTAGGC-AG------ATG---G----T-CA-------G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13682202 34 -  18376816 A----AA----A-A-TTATGT-GGGGCCTAAAG---G----C-CATTCTGAGA
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1976003 19 -   3870691 A----TA----A-g----agc-ag------ctc---a----t-------gcga
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             58945 23 +     97271 a----ta----g-gcaggtac-ag------atcA--C----A-CA-------G
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              47915 23 -    196729 A----CA----G-GCAGGTGC-AG------ATT--GC----A-CA-------G
i Suricata_suricatta.SurSur_flattened_line_6629          I 1 C 0
s Sus_scrofa.CM000828.4                                   63022688 23 -  69701581 a----ta----g-gcaggggc-ag------atc--tt----g--------aag
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1105169 19 -   1523678 a----ta----g-g----agc-ag------gtc---C----TC--TT-----G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93722 19 +    116680 g----ca----g-g----aac-ac------att---g----tg-------cag
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138548 23 -    156842 a----ta----g-gcagaggc-ag------atg--ct----g--------cag
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    407020 23 +    539355 a----ta----g-gcagaggc-ag------atg--ct----g--------cag
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               50449 19 +     70052 a----ca----g-g----agc-ag------atg---g----tgcA-------G
i Tarsius_lariang.k141_2201908                           I 4 C 0
s Tarsius_wallacei.k141_722827                               14841 19 +     18080 A----TA----G-G----AGC-AG------ATG---G----TGCA-------G
i Tarsius_wallacei.k141_722827                           I 4 C 0
s Theropithecus_gelada.CM009954.1                        186466146 19 + 186847797 A----TA----G-C----AGC-AG------GTC---C----TC--TT-----G
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_41106                    5679 14 +     27660 G----CG----G-G----AAC-AC------ATC---A----------------
i Tolypeutes_matacus.TolMat_scaffold_41106               C 0 C 0
s Trachypithecus_auratus.k141_95322                          12146 19 -     15799 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Trachypithecus_auratus.k141_95322                      C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     25513 19 +     78344 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_581431                       12317 19 -     15970 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Trachypithecus_cristatus.k141_581431                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      11279 19 +     62838 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_119873                            12244 19 -     17556 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Trachypithecus_geei.k141_119873                        C 0 C 0
s Trachypithecus_germaini.k141_545543                        12258 19 -     15912 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Trachypithecus_germaini.k141_545543                    C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      11208 19 +     64340 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          12207 19 +     63452 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_283481                   11282 19 +     21341 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Trachypithecus_leucocephalus.k141_283481               C 0 C 0
s Trachypithecus_melamera.k141_261742                         1344 19 +     11697 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Trachypithecus_melamera.k141_261742                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                        13125 19 +     33539 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5964953 19 +   6242583 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_583962                        13041 19 +     14028 A----TA----G-C----AGC-AG------GTC---C----TC------G-TG
i Trachypithecus_pileatus.k141_583962                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                     4841 23 +    200418 a----ca----g-gcaggggc-ag------atc--tt----g--------gag
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            4313647 19 +  10818551 G----CA----G-G----GGC-AG------ACC---G----TACA-------G
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15765517 23 +  33153633 a----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     822 10 +     21056 ----------------------gg------atg---t----g--------cag
i Uropsilus_gracilis.UroGra_scaffold_46687               I 7 C 0
s Ursus_maritimus.KK499267.1                               4878263 23 -   5085361 a----ca----g-gcaggtac-ag------atc--ac----a--------cag
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  31662 23 +     50397 a----cagatag-g----agc-ag------atc---a----tg-------cag
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1100575                              6751 23 +     25465 a----cagatag-g----agc-ag------atc---a----tg-------cag
i Varecia_variegata.k141_1100575                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5390030 23 -   5488506 a----ca----g-gcagaggc-ag------atc--ct----g--------aag
i Vicugna_pacos.KN270157.1                               I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 42785 23 -     43706 a----ca----a-gcaggtac-ag------atc--ac----a--------tag
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                         24644 19 +    224448 A----TA----G-G----AGC-AG------TTT---A----T--GT---G--A
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29850 23 +     86975 a----ca----g-ccatgtac-ag------atc--ac----a--------cag
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      38816 19 +     63895 A----CA----A-G----AGC-AG------ATC---A----T----GC--A-G
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 4 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21664 23 -     22999 a----ta----g-gcaggggc-ag------atc--tt----a--------atg
i Ziphius_cavirostris.ZipCav_flattened_line_16896        C 0 C 0
e Erinaceus_europaeus.JH835339.1                           3365133 123 -   7059049 I
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Desmodus_rotundus.KZ672289.1                             8650437  3 +  20541912 I
e Carollia_perspicillata.CarPer_scaffold_737331                421  3 -       918 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                 26946  3 +     43469 I
e Tonatia_saurophila.TonSau_scaffold_294                    103728  3 +    610378 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                31530  0 +     41958 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17424  0 +    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                        389332  0 -   3329780 C
e Pteropus_vampyrus.KN525825.1                             1390053  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              23005967  0 +  28871421 C
e Pteronotus_parnellii.KE854991.1                             1663  0 -     11709 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 162106  0 -    366855 C
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_39861                18895  3 -     30105 I
e Megaderma_lyra.MegLyr_scaffold_4542                        36015  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                 24123  0 +    270270 C
e Hipposideros_galeritus.HipGal_scaffold_65612                9129  0 -     20285 C
e Hipposideros_armiger.JXIK01000431.1                       132216  0 +   1711038 C
e Eidolon_helvum.KE797349.1                                  19343  0 -     31197 C
e Craseonycteris_thonglongyai.CraTho_scaffold_153350           127  2 +      5041 I
e Anoura_caudifer.AnoCau_scaffold_1412                      209496  3 +    412891 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11171 11 +     36723 GGCCTGGA-GG--A
s Acinonyx_jubatus.LLWD01001279.1                           836454 11 +   1699592 ggcctgga-aa--t
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     10713 10 -     63021 -ACCTCAAAG---C
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538396 11 -  29979442 gacctgga-aa--c
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            107838 11 -    347723 ggcctgga-ga--c
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                     1402 11 +     61208 GGCTGGGA-GA--C
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   40735 11 -     52922 GGCCTGGA-GG--A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          7057 11 +     11307 GGCCTGGA-GG--A
i Allochrocebus_lhoesti.k141_1932296                     I 3 C 0
s Allochrocebus_preussi.k141_499905                           7229 11 -     13300 GGCCTGGA-GG--A
i Allochrocebus_preussi.k141_499905                      I 3 C 0
s Allochrocebus_solatus.k141_139760                           9110 11 +     12926 GGCCTGGA-GG--A
i Allochrocebus_solatus.k141_139760                      I 3 C 0
s Alouatta_belzebul.k141_3560514                             31774 11 +     51355 GGCATGGA-GG--A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               24920 11 -     36483 GGCATGGA-GG--A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              7025 11 -     13496 GGCATGGA-GG--A
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23807 11 +     27940 GGCATGGA-GG--A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15615 11 -     39310 GGCATGGA-GG--A
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            23873 11 +     30492 GGCATGGA-GG--A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28104 11 +     47717 GGCATGGA-GG--A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_2029433                            79076 11 +     87306 GGCATGGA-GG--A
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             39058 11 +     50774 GGCATGGA-GG--A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707793 11 -   2318259 GGTCTGAA-GG--C
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303             27023 11 -     32520 AGTCTGAA-GG--A
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_2596348                                   5306 11 +     12024 GGCATGGA-GG--A
i Aotus_azarae.k141_2596348                              C 0 C 0
s Aotus_griseimembra.k141_2227177                             4972 11 -     10972 GGCATGGA-GG--A
i Aotus_griseimembra.k141_2227177                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4333433 11 -   5030052 GGCATGGA-GG--A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_1801223                              5365 11 -     12698 ggcatgga-gg--a
i Aotus_trivirgatus.k141_1801223                         C 0 C 0
s Aotus_vociferans.k141_506037                                4825 11 -     11998 GGCATGGA-GG--A
i Aotus_vociferans.k141_506037                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22216 11 +     39421 ggcctgga-ga--c
i Aplodontia_rufa.AprRuf_scaffold_37633                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       14298 11 +     45910 GGCCTGGA-GA--A
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21232069 11 -  21539123 GGCATGGA-GG--A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3141 11 -     48076 GGCATGGA-GG--A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18607 11 -     22344 GGCATGGA-GG--A
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31663 11 -     89868 GGCATGGA-GG--A
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36076 11 -     40414 GGCATGGA-GG--A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                43910 11 +     72325 ggcatgga-gg--a
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75669 11 -     92717 ggcctgga-gg--a
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              76252 11 +     85213 ggcctgga-gg--a
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222452 11 +  23207421 ggtctaga-gg--c
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4455 11 +     25979 ggtctaga-gg--c
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     12851 11 -    124022 GGTCTGAA-GG--C
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                    233029 11 -    288883 GGTCTGAA-GG--C
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20306404 11 +  48749331 gctctaaa-gg--c
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1159506 11 -   1948126 gctctgaa-gg--c
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18116616 11 +  45695690 gctctaaa-gg--c
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2852071 11 +   4408762 GGTCTGAA-GG--C
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                116933 11 -    122966 GGCACGGA-GG--A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76411 11 +     81800 GGCACGGA-GG--A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45616 11 -     95584 GGCACGGA-GG--A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69711 11 -    119600 GGCACGGA-GG--A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020440 11 -  17673402 ggtctagt-gg--c
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2353270 11 -   7040546 ggtctagt-gg--c
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  421529 11 -   1652518 ggtctagt-gg--c
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17831731 10 -  60362399 g-cctgga-aa--c
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32475 10 -     43241 g-cctgga-aa--c
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067199 10 -   9314153 g-cctgga-aa--c
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17991858 10 -  59632846 g-cctgga-aa--c
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18532964 10 +  63665305 g-cctgga-aa--c
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18861856 11 +  46296322 GGTCTGAA-GG--C
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18092574 11 -  44709034 GGTCTGAA-GG--C
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           179891 11 -    496798 GGCCTGAG-GG--A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    167119  2 +    179628 ----------G--C
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                    113407 11 +    217609 GGTCTGGA-GG--C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebus_albifrons.Contig27                                25675555 11 +  26074798 ggcatgga-gg--a
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               22023 11 +     28840 GGCATGGA-GG--A
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7694 11 +     13997 GGCATGGA-GG--A
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29816 10 +     31688 GGCCTGG--GG--G
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12257238 11 +  27778364 ggcctgaa-gt--c
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          2945 11 +     15641 ggcctgaa-gt--c
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4501709  8 +   4669795 GGCCTGGA------
i Cercocebus_atys.KQ010504.1                             C 0 I 1
s Cercocebus_chrysogaster.k141_2766003                       22981  8 -     30935 GGCCTGGA------
i Cercocebus_chrysogaster.k141_2766003                   C 0 I 1
s Cercocebus_lunulatus.k141_245046                            7383  8 +     18174 GGCCTGGA------
i Cercocebus_lunulatus.k141_245046                       C 0 I 1
s Cercocebus_torquatus.k141_4063387                           7220  8 +     18249 GGCCTGGA------
i Cercocebus_torquatus.k141_4063387                      C 0 I 1
s Cercopithecus_ascanius.k141_4281816                         2339 11 -      5884 GGCCTGGA-GG--A
i Cercopithecus_ascanius.k141_4281816                    C 0 C 0
s Cercopithecus_cephus.k141_1630443                           1363 11 +      4620 GGCCTGGA-GG--A
i Cercopithecus_cephus.k141_1630443                      C 0 C 0
s Cercopithecus_diana.k141_488174                             7799 11 +     10982 GGCCTGGA-GG--A
i Cercopithecus_diana.k141_488174                        C 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1345 11 +      4810 GGCCTGGA-GG--A
i Cercopithecus_hamlyni.k141_1302205                     C 0 C 0
s Cercopithecus_lowei.k141_4082698                            7261 11 +     34178 GGCCTGGA-GG--A
i Cercopithecus_lowei.k141_4082698                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38849371 11 +  39242232 GGCCTGGA-GG--A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21252976  6 -  21565898 -----GGA-GG--A
i Cercopithecus_mona.ctg39                               I 5 I 3193
s Cercopithecus_neglectus.k141_557928                         7427 11 -     18401 GGCCTGGA-GG--A
i Cercopithecus_neglectus.k141_557928                    C 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7490 11 -     15013 GGCCTGGA-GG--A
i Cercopithecus_nictitans.k141_1200139                   C 0 C 0
s Cercopithecus_petaurista.k141_365908                        7461 11 +     11214 GGCCTGGA-GG--A
i Cercopithecus_petaurista.k141_365908                   C 0 C 0
s Cercopithecus_pogonias.k141_391400                          2281 11 -     13831 GGCCTGGA-GG--A
i Cercopithecus_pogonias.k141_391400                     C 0 C 0
s Cercopithecus_roloway.k141_1248991                         27455 11 +     68532 GGCCTGGA-GG--A
i Cercopithecus_roloway.k141_1248991                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             511 11 -      1897 GGCCTAGG-GG--C
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       C 0 C 0
s Cheirogaleus_major.k141_333249                             43660 11 -     52598 ggcctgga-gg--a
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           38991 11 +     57038 GGCCTGGA-GG--A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Cheracebus_lucifer.k141_49986                               9831 11 -     17098 GGCATGGA-GG--G
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9701 11 +     17877 GGCATGGA-GG--G
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167268 11 -    216457 GGCATGGA-GG--G
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71741 11 +     76511 GGCATGGA-GG--G
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          113958 11 +    146308 GGCACGGA-GG--A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          45866 11 -     50570 GGCACGGA-GG--A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455239 11 -  18827391 GGCCTGGA-GG--A
i Chlorocebus_aethiops.ctg25                             I 3 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41182 11 -     50209 GGCCTGGA-GG--A
i Chlorocebus_pygerythrus.k141_1025673                   I 3 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448164 11 + 135778131 GGCCTGGA-GG--A
i Chlorocebus_sabaeus.CM001947.1                         I 3 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   738 11 -     25429 GGCCGAGA-GG--C
i Choloepus_didactylus.ChoDid_scaffold_22546             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            195866 11 +    839153 ggccgaga-gg--c
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               6711 11 -      9651 ggCCTATA-GG--C
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          I 153 C 0
s Colobus_angolensis.KN981557.1                            1936105 11 +   2368649 GGCCTGGA-GG--G
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199970083 11 + 200372422 GGCCTGGA-GG--G
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              58397 11 +     84244 GGCCTGGA-GG--G
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17566304 11 -  53390261 AGGCCAGA-GG--C
i Condylura_cristata.JH655891.1                          I 8 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 16625 10 +     83289 -GTCTGGA-GG--A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11697257  9 + 224834208 -ACCTGGA-G---C
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_123729              8662  7 -      9007 TATTTGC-------
i Crocidura_indochinensis.CroInd_scaffold_123729         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59171 11 -     87169 GGTCTGAA-GA--T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            92315 11 +   2246927 GGCCCAGG-GG--C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12562420 11 -  12879189 ggcctgga-gg--g
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16841603 11 +  35494412 ggtctaga-gg--c
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  699033 11 +   1390856 ggcctgga-gg--c
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                   31836 11 +    198055 ggcctgga-gt--c
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18914651  2 +  37912305 ----------g--c
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_47531                  13249  2 -     26976 ----------G--C
i Dipodomys_stephensi.DipSte_scaffold_47531              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       342030 11 +    607251 GGTCTGAA-GG--C
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          47656 10 -    110024 -ACTTGGAAG---C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01050844.1                            8907 10 +     12610 -ACTTGGAGG---C
i Ellobius_talpinus.LOJH01050844.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16365736 11 -  41312741 ggcctgga-ga--c
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1310342 11 +   4378816 gacctgga-gg--c
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18557810 11 -  39960074 gacctgga-gg--c
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               59851 11 +    498745 gacctgga-gg--c
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21235225 11 -  21539334 GGCCTGGA-GG--A
i Erythrocebus_patas.Contig38                            T 2220 I 2220
s Eschrichtius_robustus.EscRob_flattened_line_8968           40785  7 +    133382 ggtctag-------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5078 11 -     25849 ggtctaga-gg--c
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_1869827                             12777 11 -     21348 GGCCTGGA-GG--A
i Eulemur_albifrons.k141_1869827                         C 0 C 0
s Eulemur_collaris.k141_601111                                9979 11 +     70999 ggcctgga-gg--a
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                               7718 11 -    112731 ggcctgga-gg--a
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                              6728 11 -     68309 ggcctgga-gg--a
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_2627385                                 3864 11 -      9374 ggcctgga-gg--a
i Eulemur_fulvus.k141_2627385                            C 0 C 0
s Eulemur_macaco.k141_1562045                                32959 11 +     75513 ggcctgga-gg--a
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 30843 11 +     97555 GGCCTGGA-GG--A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            7499 11 -     30972 ggcctgga-gg--a
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_1120150                                  7376 11 +     16616 ggcctgga-gg--a
i Eulemur_rufus.k141_1120150                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              33961 11 +    111500 ggcctgga-gg--a
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20267608 11 + 206538554 ggcctgga-ga--t
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20226386 11 + 205367284 ggcctgga-ga--t
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  3396 11 -     25330 GGCCTGGA-GA--T
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Galago_moholi.ctg3793                                        785 11 +    137831 GGGCTGGA-GA--A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             1901 11 -     22493 GGGCTGGA-GA--A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_1153324                           11789 11 +     12379 GGGCTAGA-GA--A
i Galagoides_demidoff.k141_1153324                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_75343               15856 11 -     17176 ggcctggg-gg--c
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     636887 11 -    660261 GGTCTGAA-GG--C
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_149316                            5049 11 +      8016 GACCTGGA-AG--C
i Glis_glis.GliGli_scaffold_149316                       C 0 C 0
s Gorilla_beringei.k141_935316                                9419 11 -     34797 GGCCTGGA-GG--A
i Gorilla_beringei.k141_935316                           n 20 C 0
s Gorilla_gorilla.LT578336.1                              33214669 11 -  33314783 GGCCTGGA-GG--A
i Gorilla_gorilla.LT578336.1                             n 49 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   54800 11 +     78134 GACCTGGA-AG--C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                           7373 11 +     40692 ggcctgga-gg--a
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_435261                             17061 11 +     22537 ggcctgga-gg--a
i Hapalemur_gilberti.k141_435261                         C 0 C 0
s Hapalemur_griseus.k141_679418                              15708 11 -     28566 ggcctgga-gg--a
i Hapalemur_griseus.k141_679418                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         14440 11 +     42923 ggcctgga-gg--a
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17695 11 +     53142 ggcctgga-gg--a
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               272857 11 +    327341 GACCTGAA-GA--T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14576 11 -     48891 ggtctgaa-gg--c
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10261 11 -     15841 GGCCTGGA-GG--C
i Heterohyrax_brucei.HetBruBak_scaffold_90013            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6473 11 +     36432 GGTCTGGA-GG--C
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hoolock_leuconedys.ctg274                                    460470 11 +    630532 GGCCTGGA-GG--A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   8533  5 -     22022 ------GA-GA--T
i Hyaena_hyaena.HyaHya_flattened_line_62789              I 1 C 0
s Hylobates_agilis.k141_967383                                1739 11 -      4846 GGCCTGGA-GG--A
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                197 11 -      8919 GGCCTGGA-GG--A
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555168 11 - 191637585 GGCCTGGA-GG--A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3348055 11 -  11177569 GGCCTGGA-GG--A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543773 11 -   7955117 ggctgata-gg--c
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_1997670                                    2200 11 +      8453 ggcctgga-gg--a
i Indri_indri.k141_1997670                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29195 11 -     31341 ggtctaga-gg--c
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8298667 11 -   9596543 GGCCAGGA-GA--c
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                  4946 11 +     97402 ggtctaga-gg--c
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         33140 11 -     38430 GGCATGGA-AG--A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544361 11 -  30322482 ggcctgga-ag--a
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_2922                            8745 11 -     24677 ggcctgga-gg--a
i Lepilemur_ankaranensis.k141_2922                       C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4714 11 -     31569 ggcctgga-gg--a
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                         22776 11 +     25010 ggcctgga-gg--a
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      48330 11 +     54090 ggcctgga-gg--a
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3074456 11 +   3914936 ggcctgga-aa--c
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_57262                     12892 11 -     23961 ggcccaga-gg--c
i Lepus_americanus.LepAme_scaffold_57262                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             299112 11 -    662738 ggtctaga-gg--c
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1464701  8 +   1826925 GGCCTGGA------
i Lophocebus_aterrimus.ctg367                            C 0 I 1
s Loris_lydekkerianus.k141_2958567                            3791 11 -     22734 GGCCTGGA-GA--A
i Loris_lydekkerianus.k141_2958567                       C 0 C 0
s Loris_tardigradus.ctg83                                  1061219 11 +   6120653 GGCCTGGA-GA--A
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17988098 10 -  59628241 g-cctgga-aa--c
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              32957 11 +     40492 GGCCTGGA-GG--A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59702882 11 +  60120075 GGCCTGGA-GG--A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_794849                                 7076 11 +      8714 GGCCTGGA-GG--A
i Macaca_cyclopis.k119_794849                            C 0 C 0
s Macaca_fascicularis.k141_814140                           107510 11 -    114318 GGCCTGGA-GG--A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_943731                                  7321 11 +     13165 GGCCTGGA-GG--A
i Macaca_fuscata.k119_943731                             C 0 C 0
s Macaca_leonina.k141_2438370                                12694 11 -     14632 GGCCTGGA-GG--A
i Macaca_leonina.k141_2438370                            C 0 C 0
s Macaca_maura.k141_515834                                   12852 11 +     14712 GGCCTGGA-GG--A
i Macaca_maura.k141_515834                               C 0 C 0
s Macaca_mulatta.NC_041758.1                             186866891 11 + 187317192 GGCCTGGA-GG--A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25492006 11 -  25927173 GGCCTGGA-GG--A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_128247                                   20322 11 +     98240 GGCCTGGA-GG--A
i Macaca_nigra.k141_128247                               C 0 C 0
s Macaca_radiata.k141_3254723                                 5864 11 +     10028 GGCCTGGA-GG--A
i Macaca_radiata.k141_3254723                            C 0 C 0
s Macaca_siberu.k141_1929020                                  7116 11 -      9047 GGCCTGGA-GG--A
i Macaca_siberu.k141_1929020                             C 0 C 0
s Macaca_silenus.Contig273                                  358125 11 -    668171 GGCCTGGA-GG--A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_596453                                 1497 11 -      5469 GGCCTGGA-GG--A
i Macaca_thibetana.k99_596453                            C 0 C 0
s Macaca_tonkeana.k141_683787                                 7335 11 +      9199 GGCCTGGA-GG--A
i Macaca_tonkeana.k141_683787                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961777  8 -  24302211 GGCCTGGA------
i Mandrillus_leucophaeus.scaffold280                     C 0 I 1
s Mandrillus_sphinx.Contig270                               377530  8 +    752769 GGCCTGGA------
i Mandrillus_sphinx.Contig270                            C 0 I 1
s Manis_javanica.JSZB01003497.1                              40188 11 +    737560 ggcctgga-gg--c
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              72359 11 -    317179 gacctgga-gg--c
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33124840 11 -  40650429 ggctgata-gg--c
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23275 11 +     74585 ggcctgga-ga--c
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 66053 10 +    140813 -ACCTGGTAG---C
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12212360  9 -  29670104 -ACCTGGA-G---C
i Mesocricetus_auratus.KB708134.1                        C 0 I 3
s Mesoplodon_bidens.MesBid_scaffold_74495                     4921 11 -     19186 ggcctaga-gg--c
i Mesoplodon_bidens.MesBid_scaffold_74495                C 0 C 0
s Microcebus_murinus.CM007674.1                           18313331 11 -  93316391 GGCCTGGA-GG--A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_791330                           1648 11 -     13566 GGCCTGGA-GG--A
i Miopithecus_ogouensis.k141_791330                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        24896 11 +     26817 GGCCTGGA-AA--C
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    56849 11 -    437263 ggtctaga-gg--c
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32029 11 +     82753 ggtctgaa-gg--c
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21437 11 +     63510 GACCTGAA-GA--T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mus_pahari.LT608297.1                                   31390832  1 -  89631738 -A------------
i Mus_pahari.LT608297.1                                  C 0 I 17
s Muscardinus_avellanarius.MusAve_scaffold_74954             15357 11 -     17106 AACCTGGC-AG--C
i Muscardinus_avellanarius.MusAve_scaffold_74954         C 0 C 0
s Mustela_putorius.JH418006.1                               330488 11 -  14710649 ggcctgga-ga--c
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14226 11 -     28317 ggtctaga-gg--t
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 C 0
s Nasalis_larvatus.k141_970469                               18507 11 +     37058 GGCCTGGA-GG--G
i Nasalis_larvatus.k141_970469                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343449 11 +  31847680 ggcctgga-aa--c
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5894901 11 +   7148211 ggtctaga-gg--c
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9181988 10 -   9404916 g-cctgga-aa--c
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102653333 11 - 196305487 GGCCTGGA-GA--A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_921975                              9475 11 +     15238 GGCCTGGA-GA--A
i Nycticebus_coucang.k141_921975                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827822 11 + 199412804 GGCCTGGA-GA--A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              533999 11 -   2017862 ggcctgga-aa--c
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         168699 11 +    630418 GGGCTGAA-GG--T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107580 11 -    150152 GGTCTGAA-GG--C
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25207 10 +    140218 -ACTTGGAGG---C
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                   12365  9 +     41509 -ACCTGAA-G---C
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  2812127 11 -  10937097 ggtctaga-gg--c
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1758 11 -      4812 ggcatgaa-gg--c
i Orycteropus_afer.OryAfe_flattened_line_327065          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190495 11 + 174332312 ggcccaga-gg--c
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       495055 10 -    559221 g-cctgga-aa--a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_187572                         4438 11 -      5557 GGGCTGGA-GA--A
i Otolemur_crassicaudatus.k141_187572                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             738091 11 -   1103335 GGGCTGGA-GA--A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17617509 11 +  44047080 GGTCTGAA-GG--C
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1510 11 -     13921 GGTCTGAA-GG--C
i Ovis_canadensis.OviCan_scaffold_75879                  C 0 C 0
s Pan_paniscus.KQ411608.1                                     3361 11 +     15831 GGCCTGGA-GG--A
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649175 11 + 189151597 GGCCTGGA-GG--A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  181257 11 +    230217 ggcctgga-ga--t
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                296054 11 +  18783137 ggcctgga-ga--t
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4751407 11 -   8748460 GGCCTGGA-GA--T
i Panthera_tigris.KE722367.1                             I 3 C 0
s Pantholops_hodgsonii.KE114653.1                          1296427 11 -   2937107 ggtctgaa-gg--c
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183469950  8 + 183742232 GGCCTGGA------
i Papio_anubis.CM001495.2                                C 0 I 1
s Papio_cynocephalus.k141_703094                              6288  8 -     17637 GGCCTGGA------
i Papio_cynocephalus.k141_703094                         C 0 I 1
s Papio_hamadryas.Contig39                                20592447  8 +  20919399 GGCCTGGA------
i Papio_hamadryas.Contig39                               C 0 I 1
s Papio_kindae.k141_1936966                                  31712  8 +     41871 GGCCTGGA------
i Papio_kindae.k141_1936966                              C 0 I 1
s Papio_papio.k141_2087334                                    7295  8 -     13745 GGCCTGGA------
i Papio_papio.k141_2087334                               C 0 I 1
s Papio_ursinus.k141_4818248                                 14795  8 +     25215 GGCCTGGA------
i Papio_ursinus.k141_4818248                             C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42192 11 -     78924 GGCCTGGA-GA--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 4
s Perodicticus_ibeanus.k141_1387561                          11721 11 +     15382 GGCCTGGG-GA--A
i Perodicticus_ibeanus.k141_1387561                      C 0 C 0
s Perodicticus_potto.k141_842195                             18271 11 -     21729 GGCCTGGG-GA--A
i Perodicticus_potto.k141_842195                         C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13523  2 +     28765 ----------G--C
i Perognathus_longimembris.PerPac_flattened_line_39705   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18245121  9 -  18517816 -ACCTGAA-G---C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              38830 11 +     63832 ggtctaga-gg--c
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                           28747 11 -     55023 GGCCTGGA-GG--G
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64165 11 +     89929 GGCCTGGA-GG--G
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14256 11 -     40849 GGCCTGGA-GG--G
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326733 11 -  14605196 GGCCTGGA-GG--G
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                             19548 11 +     26961 GGCACGGA-GG--A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15561 11 +     23417 GGCACGGA-GG--A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19542 11 +     29694 GGCACGGA-GG--A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44577 11 +     52772 GGCACGGA-GG--A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19568 11 +     26198 GGCACGGA-GG--A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3955903 11 +   4542175 GGCACGGA-GG--A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19495 11 -     23490 GGCACGGA-GG--A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           4998 11 -      7527 ggtctaga-gg--c
i Platanista_gangetica.PlaMin_flattened_line_175331      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       22269 11 -     39866 GGCACGGA-GG--G
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        31427 11 +     34906 GGCACGGA-GG--G
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       35690 11 +     87950 GGCACGGA-GG--G
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     36489 11 +     88961 GGCACGGA-GG--G
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         22182 11 +     39403 GGCACGGA-GG--G
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          35958 11 -     87928 GGCACGGA-GG--G
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         42939 11 +     60166 GGCACGGA-GG--G
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43132 11 +     67232 GGCACGGA-GG--G
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38597 11 +     90634 GGCACGGA-GG--G
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          35980 11 -     89403 GGCACGGA-GG--G
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189181956 11 + 189387572 GGCCTGGA-GG--A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9596850 11 +   9816681 GGCCTGGA-GG--A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              18332 11 -     69807 GGCCTGGA-GG--G
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              11694 11 +     80239 GGCCTGGA-GG--G
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_112514                11578 11 +     16234 GGCCTGGA-GG--C
i Procavia_capensis.ProCapCap_scaffold_112514            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2616995 11 -   4620579 GGCCTGGA-GG--A
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1013051 11 +   2598838 GGCCTGGA-GG--A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_114130                           9119 11 -     19127 ggcctgga-gg--a
i Propithecus_coronatus.k141_114130                      C 0 C 0
s Propithecus_diadema.k141_599139                            10213 11 +     10533 ggcctgga-gg--a
i Propithecus_diadema.k141_599139                        C 0 C 0
s Propithecus_edwardsi.k141_635656                             455 11 +     30655 ggcctgga-gg--a
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_217725                            2647 11 +     14082 ggcctgga-gg--a
i Propithecus_perrieri.k141_217725                       C 0 C 0
s Propithecus_tattersalli.k141_790011                        50332 11 -     67325 ggcctgga-gg--a
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7125 11 -     35169 ggcctgga-gg--a
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036367.1                            19319 10 -     31435 -ACCTGGTAG---C
i Psammomys_obesus.NESX01036367.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14183 11 +     25061 ggcctgga-ga--c
i Pteronura_brasiliensis.PteBra_flattened_line_42152     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20305856 11 -  38429054 ggcctgga-ga--t
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             40402 11 -     91421 GGCCTGGA-GG--G
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7634582 11 +   7812017 GGCCTGGA-GG--G
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             40444 11 -     72585 GGCCTGGA-GG--G
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31171 11 +     55207 GGTCTGAA-GG--T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rhinopithecus_bieti.k119_188731                            15650 11 -     21983 GGCCTGGA-GG--G
i Rhinopithecus_bieti.k119_188731                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91262019 11 - 195417433 GGCCTGGA-GG--G
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7701110 11 +   7961872 GGCCTGGA-GG--G
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1230 11 -      3450 GGTCTGAA-GG--C
i Saiga_tatarica.SaiTat_scaffold_455678                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119968405 11 - 121099817 GGCATGGA-GG--A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40697 11 +     46362 GGCATGGA-GG--A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               40757 11 +     45824 GGCATGGA-GG--A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             57425 11 -     64574 GGCATGGA-GG--A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                              20519 11 -     23631 GGCATGGA-GG--A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 40683 11 -     61129 GGCATGGA-GG--A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5443727 11 -   5703754 GGCATGGA-GG--A
i Sapajus_apella.ctg103                                  I 1846 C 0
s Sapajus_macrocephalus.k141_351809                          72966 11 -     80660 GGCATGGA-GG--A
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    176995 11 -    313613 ggcctaga-gg--c
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 7 C 0
s Semnopithecus_entellus.k141_1705875                         5650 11 +     17286 GGCCTGGA-GG--G
i Semnopithecus_entellus.k141_1705875                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                       5775 11 -     58920 GGCCTGGA-GG--G
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                            5683 11 +     45317 GGCCTGGA-GG--G
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_960425                             5796 11 +      9426 GGCCTGGA-GG--G
i Semnopithecus_priam.k141_960425                        C 0 C 0
s Semnopithecus_schistaceus.k141_972136                       5689 11 +     24620 GGCCTGGA-GG--G
i Semnopithecus_schistaceus.k141_972136                  C 0 C 0
s Semnopithecus_vetulus.k141_654052                           1619 11 -      5251 GGCCTGGA-GG--G
i Semnopithecus_vetulus.k141_654052                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                     4405  9 -     77746 -ACCTAGA-G---G
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126              23088 11 +   1910179 AATCTGGA-GG--C
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13682236  7 -  18376816 AATCTGC-------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1976022 11 -   3870691 ggctgata-gg--c
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             58968 11 +     97271 GGGCTAGA-GA--C
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              47938 11 -    196729 GACCTGAA-GA--T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 4
s Sus_scrofa.CM000828.4                                   63022711 11 -  69701581 ggtctgga-gc--c
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1105188 11 -   1523678 GGCCTGGA-GG--A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93741 11 +    116680 ggcctaga-gg--t
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138571 11 -    156842 ggcctgga-gg--c
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    407043 11 +    539355 ggcctgga-gg--c
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               50468 11 +     70052 GGCCTGGA-GG--A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_722827                               14860 11 +     18080 GGCCTGGA-GG--A
i Tarsius_wallacei.k141_722827                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186466165  8 + 186847797 GGCCTGGA------
i Theropithecus_gelada.CM009954.1                        C 0 I 1
s Tolypeutes_matacus.TolMat_scaffold_41106                    5693 11 +     27660 GGCCTAGA-GG--C
i Tolypeutes_matacus.TolMat_scaffold_41106               C 0 C 0
s Trachypithecus_auratus.k141_95322                          12165 11 -     15799 GGCCTGGA-GG--G
i Trachypithecus_auratus.k141_95322                      C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     25532 11 +     78344 GGCCTGGA-GG--G
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_581431                       12336 11 -     15970 GGCCTGGA-GG--G
i Trachypithecus_cristatus.k141_581431                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      11298 11 +     62838 GGCCTGGA-GG--G
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_119873                            12263 11 -     17556 GGCCTGGA-GG--G
i Trachypithecus_geei.k141_119873                        C 0 C 0
s Trachypithecus_germaini.k141_545543                        12277 11 -     15912 GGCCTGGA-GG--G
i Trachypithecus_germaini.k141_545543                    C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      11227 11 +     64340 GGCCTGGA-GG--G
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          12226 11 +     63452 GGCCTGGA-GG--G
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_283481                   11301 11 +     21341 GGCCTGGA-GG--G
i Trachypithecus_leucocephalus.k141_283481               C 0 C 0
s Trachypithecus_melamera.k141_261742                         1363 11 +     11697 GGCCTGGA-GG--G
i Trachypithecus_melamera.k141_261742                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                        13144 11 +     33539 GGCCTGGA-GG--G
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5964972 11 +   6242583 GGCCTGGA-GG--G
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_583962                        13060 11 +     14028 GGCCTGGA-GG--G
i Trachypithecus_pileatus.k141_583962                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                     4864 11 +    200418 gggccaga-gg--c
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            4313666 11 +  10818551 CACCCGGA-GG--C
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15765540 11 +  33153633 ggtctaga-gg--c
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     832 11 +     21056 ggtctaaa-gg--c
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                               4878286 11 -   5085361 gacctgga-ga--c
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  31685 11 +     50397 ggcctgga-gg--a
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1100575                              6774 11 +     25465 ggcctgga-gg--a
i Varecia_variegata.k141_1100575                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5390053 11 -   5488506 ggtctagt-gg--c
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 42808 10 -     43706 g-cctgga-aa--c
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                         24663 13 +    224448 GGGCTAGT-GGCCC
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29873 11 +     86975 ggcctgga-aa--c
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      38835 11 +     63895 GGCTGGGA-GA--T
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 116
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21687 11 -     22999 ggtctaga-gg--c
i Ziphius_cavirostris.ZipCav_flattened_line_16896        C 0 C 0
e Erinaceus_europaeus.JH835339.1                           3365133 123 -   7059049 I
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Desmodus_rotundus.KZ672289.1                             8650437  3 +  20541912 I
e Carollia_perspicillata.CarPer_scaffold_737331                421  3 -       918 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                 26946  3 +     43469 I
e Tonatia_saurophila.TonSau_scaffold_294                    103728  3 +    610378 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                31530  0 +     41958 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17424  0 +    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                        389332  0 -   3329780 C
e Rattus_norvegicus.chr16                                 53606088  0 +  90668790 C
e Pteropus_vampyrus.KN525825.1                             1390053  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              23005967  0 +  28871421 C
e Pteronotus_parnellii.KE854991.1                             1663  0 -     11709 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 162106  0 -    366855 C
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_39861                18895  3 -     30105 I
e Megaderma_lyra.MegLyr_scaffold_4542                        36015  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                 24123  0 +    270270 C
e Hipposideros_galeritus.HipGal_scaffold_65612                9129  0 -     20285 C
e Hipposideros_armiger.JXIK01000431.1                       132216  0 +   1711038 C
e Eidolon_helvum.KE797349.1                                  19343  0 -     31197 C
e Craseonycteris_thonglongyai.CraTho_scaffold_153350           127  2 +      5041 I
e Anoura_caudifer.AnoCau_scaffold_1412                      209496  3 +    412891 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11182  9 +     36723 TATC-T-TCAG
s Acinonyx_jubatus.LLWD01001279.1                           836465  4 +   1699592 cact-------
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 3
s Acomys_cahirinus.AcoCah_scaffold_21377                     10723 10 -     63021 TATT-TTTAAT
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538407  9 -  29979442 catt-t-taag
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            107849  9 -    347723 catt-t-taag
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                     1413  9 +     61208 AATT-T-TAAT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   40746  9 -     52922 CATC-T-TCAG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          7068  9 +     11307 CATC-T-TCAG
i Allochrocebus_lhoesti.k141_1932296                     C 0 C 0
s Allochrocebus_preussi.k141_499905                           7240  9 -     13300 CATC-T-TCAG
i Allochrocebus_preussi.k141_499905                      C 0 C 0
s Allochrocebus_solatus.k141_139760                           9121  9 +     12926 CATC-T-TCAG
i Allochrocebus_solatus.k141_139760                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             31785  9 +     51355 TATG-T-TAAG
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               24931  9 -     36483 TATC-T-TAAG
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              7036  9 -     13496 TATG-T-TAAG
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23818  9 +     27940 TATC-T-TAAG
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15626  9 -     39310 TATC-T-TAAG
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            23884  9 +     30492 TATC-T-TAAG
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28115  9 +     47717 TATC-T-TAAG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_2029433                            79087  9 +     87306 TATC-T-TAAG
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             39069  9 +     50774 TATC-T-TAAG
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707804  9 -   2318259 CATT-T-TAAG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303             27034  9 -     32520 CATT-T-TAAA
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_2596348                                   5317  9 +     12024 TATC-T-TAAC
i Aotus_azarae.k141_2596348                              C 0 C 0
s Aotus_griseimembra.k141_2227177                             4983  9 -     10972 TATC-T-TAAC
i Aotus_griseimembra.k141_2227177                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4333444  9 -   5030052 TATC-T-TAAG
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_1801223                              5376  9 -     12698 tatc-t-taac
i Aotus_trivirgatus.k141_1801223                         C 0 C 0
s Aotus_vociferans.k141_506037                                4836  9 -     11998 TATC-T-TAAC
i Aotus_vociferans.k141_506037                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22227  9 +     39421 tatt-t-taag
i Aplodontia_rufa.AprRuf_scaffold_37633                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       14309  9 +     45910 CATT-T-TAAG
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21232080  9 -  21539123 TATC-T-TAAG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3152  9 -     48076 TATC-T-TAAG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18618  9 -     22344 TATC-T-TAAG
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31674  9 -     89868 TATC-T-TAAG
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36087  9 -     40414 TATC-T-TAAG
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                43921  9 +     72325 tatc-t-taag
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75680  9 -     92717 catt-t-taag
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              76263  9 +     85213 catt-t-taag
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222463  9 +  23207421 catt-t-taag
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4466  9 +     25979 catt-t-taag
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     12862  9 -    124022 CATT-T-TAAG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                    233040  9 -    288883 CATT-T-TAAG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20306415  9 +  48749331 cact-t-taag
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1159517  9 -   1948126 catt-t-taag
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18116627  9 +  45695690 cact-t-taag
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2852082  9 +   4408762 CATT-T-TAAG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                116944  9 -    122966 CATC-T-TAAG
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76422  9 +     81800 CATC-T-TAAG
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45627  9 -     95584 CATC-T-TAAG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69722  9 -    119600 CATC-T-TAAG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020451  9 -  17673402 catt-t-taag
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2353281  9 -   7040546 catt-t-taag
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  421540  9 -   1652518 catt-t-taag
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17831741  9 -  60362399 catt-t-taag
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32485  9 -     43241 catt-t-taag
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067209  9 -   9314153 catt-t-taag
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17991868  9 -  59632846 catt-t-taag
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18532974  9 +  63665305 catt-t-taag
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18861867  9 +  46296322 CATT-T-TAAG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18092585  9 -  44709034 CATT-T-TAAG
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           179902  9 -    496798 TCTT-T-TAAG
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    167121  9 +    179628 CAGT-T-TAAG
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                    113418  9 +    217609 CATT-T-TAAA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebus_albifrons.Contig27                                25675566  9 +  26074798 tacc-t-taag
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               22034  9 +     28840 TACC-T-TAAG
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7705  9 +     13997 TACC-T-TAAG
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29826  9 +     31688 TCTC-T-TAAG
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12257249  9 +  27778364 catt-t-taag
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          2956  9 +     15641 catt-t-taag
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4501718  9 +   4669795 CATC-T-TCAG
i Cercocebus_atys.KQ010504.1                             I 1 C 0
s Cercocebus_chrysogaster.k141_2766003                       22990  9 -     30935 CATC-T-TCAG
i Cercocebus_chrysogaster.k141_2766003                   I 1 C 0
s Cercocebus_lunulatus.k141_245046                            7392  9 +     18174 CATC-T-TCAG
i Cercocebus_lunulatus.k141_245046                       I 1 C 0
s Cercocebus_torquatus.k141_4063387                           7229  9 +     18249 CATC-T-TCAG
i Cercocebus_torquatus.k141_4063387                      I 1 C 0
s Cercopithecus_ascanius.k141_4281816                         2350  9 -      5884 CATC-T-TCAG
i Cercopithecus_ascanius.k141_4281816                    C 0 C 0
s Cercopithecus_cephus.k141_1630443                           1374  9 +      4620 CATC-T-TCAG
i Cercopithecus_cephus.k141_1630443                      C 0 C 0
s Cercopithecus_diana.k141_488174                             7810  9 +     10982 CATC-T-TCAG
i Cercopithecus_diana.k141_488174                        C 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1356  9 +      4810 CATC-T-TCAG
i Cercopithecus_hamlyni.k141_1302205                     C 0 C 0
s Cercopithecus_lowei.k141_4082698                            7272  9 +     34178 CATC-T-TCAG
i Cercopithecus_lowei.k141_4082698                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38849382  9 +  39242232 CATC-T-TCAG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21256175  9 -  21565898 CATC-T-TCAG
i Cercopithecus_mona.ctg39                               I 3193 C 0
s Cercopithecus_neglectus.k141_557928                         7438  9 -     18401 CATC-T-TCAG
i Cercopithecus_neglectus.k141_557928                    C 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7501  9 -     15013 CATC-T-TCAG
i Cercopithecus_nictitans.k141_1200139                   C 0 C 0
s Cercopithecus_petaurista.k141_365908                        7472  9 +     11214 CATC-T-TCAG
i Cercopithecus_petaurista.k141_365908                   C 0 C 0
s Cercopithecus_pogonias.k141_391400                          2292  9 -     13831 CATC-T-TCAG
i Cercopithecus_pogonias.k141_391400                     C 0 C 0
s Cercopithecus_roloway.k141_1248991                         27466  9 +     68532 CATC-T-TCAG
i Cercopithecus_roloway.k141_1248991                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             522  8 -      1897 CAGC-T-GAC-
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       C 0 C 0
s Cheirogaleus_major.k141_333249                             43671  9 -     52598 catt-t-taag
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           39002  9 +     57038 CATC-T-TAAG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Cheracebus_lucifer.k141_49986                               9842  9 -     17098 TGTC-T-TAAG
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9712  9 +     17877 TGTC-T-TAAG
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167279  9 -    216457 TGTC-T-TAAG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71752  9 +     76511 TGTC-T-TAAG
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          113969  9 +    146308 CATC-T-TAAG
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          45877  9 -     50570 CATC-T-TAAG
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455250  9 -  18827391 CATC-T-TCAG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41193  9 -     50209 CATC-T-TCAG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448175  9 + 135778131 CATC-T-TCAG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   749  9 -     25429 CAGT-T-GATG
i Choloepus_didactylus.ChoDid_scaffold_22546             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            195877  9 +    839153 cagt-t-gatg
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               6722  9 -      9651 CATT-T-TAAG
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          C 0 C 0
s Colobus_angolensis.KN981557.1                            1936116  9 +   2368649 CATC-T-TCAG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199970094  9 + 200372422 CATC-T-TCAG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              58408  9 +     84244 CATC-T-TCAG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17566315  9 -  53390261 TATT-T-TAAG
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 16635  9 +     83289 CATT-T-TAAT
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11697266  9 + 224834208 TATT-G-TAAT
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_123729              8669  7 -      9007 -A-T-T-AATT
i Crocidura_indochinensis.CroInd_scaffold_123729         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59182  4 -     87169 CACT-------
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 3
s Dasypus_novemcinctus.JH564415.1                            92326  8 +   2246927 CAGC-T-GAC-
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12562431  9 -  12879189 catt-t-taag
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16841614  9 +  35494412 catt-t-taag
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  699044  9 +   1390856 catt-t-taag
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                   31847  9 +    198055 catt-t-taag
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18914653  9 +  37912305 catt-t-taag
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_47531                  13251  9 -     26976 CATT-T-TAAG
i Dipodomys_stephensi.DipSte_scaffold_47531              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       342041  9 +    607251 CATT-T-TAAG
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          47666  9 -    110024 CATT-T-TAAT
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01050844.1                            8917  9 +     12610 TATT-T-TAAT
i Ellobius_talpinus.LOJH01050844.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16365747  9 -  41312741 catt-t-taag
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1310353  9 +   4378816 catt-t-taag
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18557821  9 -  39960074 catt-t-taag
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               59862  9 +    498745 catt-t-taag
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21237456  9 -  21539334 CATC-T-TCAG
i Erythrocebus_patas.Contig38                            I 2220 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           40792  4 +    133382 -------taag
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5089  9 -     25849 cact-t-taag
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_1869827                             12788  9 -     21348 CAAT-T-TAAG
i Eulemur_albifrons.k141_1869827                         C 0 C 0
s Eulemur_collaris.k141_601111                                9990  9 +     70999 caat-t-taag
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                               7729  9 -    112731 caat-t-taag
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                              6739  9 -     68309 caat-t-taag
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_2627385                                 3875  9 -      9374 caat-t-taag
i Eulemur_fulvus.k141_2627385                            C 0 C 0
s Eulemur_macaco.k141_1562045                                32970  9 +     75513 caat-t-taag
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 30854  9 +     97555 CAAT-C-TAAG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            7510  9 -     30972 aaat-c-taag
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_1120150                                  7387  9 +     16616 caat-t-taag
i Eulemur_rufus.k141_1120150                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              33972  9 +    111500 caat-t-taag
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20267619  4 + 206538554 cact-------
i Felis_catus.CM001381.2                                 C 0 I 3
s Felis_catus_fca126.CM031415.1                           20226397  4 + 205367284 cACT-------
i Felis_catus_fca126.CM031415.1                          C 0 I 3
s Felis_nigripes.FelNig_flattened_line_44075                  3407  4 -     25330 CACT-------
i Felis_nigripes.FelNig_flattened_line_44075             C 0 I 3
s Galago_moholi.ctg3793                                        796  9 +    137831 CATT-T-TAAG
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             1912  9 -     22493 CATT-T-TAAG
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_1153324                           11800  9 +     12379 CATT-T-TAAG
i Galagoides_demidoff.k141_1153324                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_75343               15867  9 -     17176 catt-t-taag
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     636898  9 -    660261 CATT-T-TAAG
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_149316                            5060  9 +      8016 CACT-T-TAAG
i Glis_glis.GliGli_scaffold_149316                       C 0 I 154
s Gorilla_beringei.k141_935316                                9430  9 -     34797 TATC-T-TCAG
i Gorilla_beringei.k141_935316                           C 0 I 38
s Gorilla_gorilla.LT578336.1                              33214680  9 -  33314783 TATC-T-TCAG
i Gorilla_gorilla.LT578336.1                             C 0 I 708
s Graphiurus_murinus.GraMur_scaffold_10447                   54811  9 +     78134 CACT-T-TAAG
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 155
s Hapalemur_alaotrensis.k141_330369                           7384  9 +     40692 caat-t-taag
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_435261                             17072  9 +     22537 caat-t-taag
i Hapalemur_gilberti.k141_435261                         C 0 C 0
s Hapalemur_griseus.k141_679418                              15719  9 -     28566 caat-t-taag
i Hapalemur_griseus.k141_679418                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         14451  9 +     42923 caat-t-taag
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17706  9 +     53142 caat-t-taag
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               272868  4 +    327341 CACT-------
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 3
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14587  9 -     48891 catt-t-taag
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10272  9 -     15841 CATC-T-AAAG
i Heterohyrax_brucei.HetBruBak_scaffold_90013            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6484  9 +     36432 TATC-T-TAAG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hoolock_leuconedys.ctg274                                    460481  9 +    630532 TACC-T-TCAG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   8538  4 -     22022 CACT-------
i Hyaena_hyaena.HyaHya_flattened_line_62789              C 0 I 3
s Hylobates_agilis.k141_967383                                1750  9 -      4846 TACC-T-TCAG
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                208  9 -      8919 TACC-T-TCAG
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555179  9 - 191637585 GACC-T-TCAG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3348066  9 -  11177569 GACC-T-TCAG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543784  9 -   7955117 catt-t-taaa
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_1997670                                    2211  9 +      8453 catt-t-taag
i Indri_indri.k141_1997670                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29206  9 -     31341 catt-t-taag
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8298678  9 -   9596543 aatt-t-taat
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                  4957  9 +     97402 catt-t-taag
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         33151  9 -     38430 TATC-T-TAAG
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544372  9 -  30322482 caat-t-taag
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_2922                            8756  9 -     24677 catt-t-aaag
i Lepilemur_ankaranensis.k141_2922                       C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4725  9 -     31569 catt-t-aaag
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                         22787  9 +     25010 catt-t-aaag
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      48341  9 +     54090 catt-t-aaag
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3074467 10 +   3914936 catttt-taag
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_57262                     12903  9 -     23961 catt-t-ctaa
i Lepus_americanus.LepAme_scaffold_57262                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             299123  9 -    662738 catt-t-taag
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1464710  9 +   1826925 CATC-T-TCAG
i Lophocebus_aterrimus.ctg367                            I 1 C 0
s Loris_lydekkerianus.k141_2958567                            3802  9 -     22734 CATT-T-TAAG
i Loris_lydekkerianus.k141_2958567                       C 0 C 0
s Loris_tardigradus.ctg83                                  1061230  9 +   6120653 CATT-T-TAAG
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17988108  9 -  59628241 catt-t-taag
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              32968  9 +     40492 CATC-T-TCAG
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59702893  9 +  60120075 CATC-T-TCAG
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_794849                                 7087  9 +      8714 CATC-T-TCAG
i Macaca_cyclopis.k119_794849                            C 0 C 0
s Macaca_fascicularis.k141_814140                           107521  9 -    114318 CATC-T-TCAG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_943731                                  7332  9 +     13165 CATC-T-TCAG
i Macaca_fuscata.k119_943731                             C 0 C 0
s Macaca_leonina.k141_2438370                                12705  9 -     14632 CATC-T-TCAG
i Macaca_leonina.k141_2438370                            C 0 C 0
s Macaca_maura.k141_515834                                   12863  9 +     14712 CATC-T-TCAG
i Macaca_maura.k141_515834                               C 0 C 0
s Macaca_mulatta.NC_041758.1                             186866902  9 + 187317192 CATC-T-TCAG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25492017  9 -  25927173 CATC-T-TCAG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_128247                                   20333  9 +     98240 CATC-T-TCAG
i Macaca_nigra.k141_128247                               C 0 C 0
s Macaca_radiata.k141_3254723                                 5875  9 +     10028 CATC-T-TCAG
i Macaca_radiata.k141_3254723                            C 0 C 0
s Macaca_siberu.k141_1929020                                  7127  9 -      9047 CATC-T-TCAG
i Macaca_siberu.k141_1929020                             C 0 C 0
s Macaca_silenus.Contig273                                  358136  9 -    668171 CATC-T-TCAG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_596453                                 1508  9 -      5469 CATC-T-TCAG
i Macaca_thibetana.k99_596453                            C 0 C 0
s Macaca_tonkeana.k141_683787                                 7346  9 +      9199 CATC-T-TCAG
i Macaca_tonkeana.k141_683787                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961786  9 -  24302211 CATC-T-TCAG
i Mandrillus_leucophaeus.scaffold280                     I 1 C 0
s Mandrillus_sphinx.Contig270                               377539  9 +    752769 CATC-T-TCAG
i Mandrillus_sphinx.Contig270                            I 1 C 0
s Manis_javanica.JSZB01003497.1                              40199  9 +    737560 cact-t-caag
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              72370  9 -    317179 cact-t-taaa
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33124851  9 -  40650429 catt-t-taag
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23286  9 +     74585 catt-t-taag
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12212372  4 -  29670104 -------TAAT
i Mesocricetus_auratus.KB708134.1                        I 3 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 66063  4 +    140813 CATT-------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 5
s Mesoplodon_bidens.MesBid_scaffold_74495                     4932  9 -     19186 catt-t-gaag
i Mesoplodon_bidens.MesBid_scaffold_74495                C 0 C 0
s Microcebus_murinus.CM007674.1                           18313342  9 -  93316391 CATT-T-TAAG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_791330                           1659  9 -     13566 CATC-T-TCAG
i Miopithecus_ogouensis.k141_791330                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        24907  9 +     26817 CATT-T-TAAG
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    56860  9 -    437263 catt-t-taag
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32040  9 +     82753 catt-t-taag
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21448  4 +     63510 CACT-------
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 3
s Muscardinus_avellanarius.MusAve_scaffold_74954             15368  9 -     17106 CACT-T-TAAT
i Muscardinus_avellanarius.MusAve_scaffold_74954         C 0 I 150
s Mustela_putorius.JH418006.1                               330499  9 -  14710649 catt-t-taag
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14237  9 -     28317 cagc-t-gaca
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 C 0
s Nasalis_larvatus.k141_970469                               18518  9 +     37058 CATC-T-TCAG
i Nasalis_larvatus.k141_970469                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343460  9 +  31847680 catt-t-taag
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5894912  9 +   7148211 catt-t-taag
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9181998  9 -   9404916 catt-t-taag
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102653344  9 - 196305487 CATT-T-TAAG
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_921975                              9486  9 +     15238 CATT-T-TAAG
i Nycticebus_coucang.k141_921975                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827833  9 + 199412804 CATT-T-TAAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              534010  9 -   2017862 catt-t-taag
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         168710  9 +    630418 CATT-T-TAAG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107591  9 -    150152 CGTT-T-TAAG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25217  9 +    140218 TATT-T-TAAT
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                   12374  9 +     41509 TATT-T-TAAT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  2812138  9 -  10937097 catt-t-taag
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1769  9 -      4812 catt-t-taag
i Orycteropus_afer.OryAfe_flattened_line_327065          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190506  9 + 174332312 catt-t-ctaa
i Oryctolagus_cuniculus.CM000791.1                       C 0 I 2
s Otocyon_megalotis.JAEUCK010005147.1                       495065  9 -    559221 catt-t-taag
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_187572                         4449  9 -      5557 CATT-T-TAAG
i Otolemur_crassicaudatus.k141_187572                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             738102  9 -   1103335 CATT-T-TAAG
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17617520  9 +  44047080 CATT-T-TAAG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1521  9 -     13921 CATT-T-TAAG
i Ovis_canadensis.OviCan_scaffold_75879                  C 0 C 0
s Pan_paniscus.KQ411608.1                                     3372  9 +     15831 TATC-T-TCAG
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649186  9 + 189151597 TATC-T-TCAG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  181268  4 +    230217 cact-------
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 3
s Panthera_pardus.KV860321.1                                296065  4 +  18783137 cact-------
i Panthera_pardus.KV860321.1                             C 0 I 3
s Panthera_tigris.KE722367.1                               4751418  4 -   8748460 CACT-------
i Panthera_tigris.KE722367.1                             C 0 I 3
s Pantholops_hodgsonii.KE114653.1                          1296438  9 -   2937107 catt-t-taag
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183469959  9 + 183742232 CATC-T-TCAG
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_703094                              6297  9 -     17637 CATC-T-TCAG
i Papio_cynocephalus.k141_703094                         I 1 C 0
s Papio_hamadryas.Contig39                                20592456  9 +  20919399 CATC-T-TCAG
i Papio_hamadryas.Contig39                               I 1 C 0
s Papio_kindae.k141_1936966                                  31721  9 +     41871 CATC-T-TCAG
i Papio_kindae.k141_1936966                              I 1 C 0
s Papio_papio.k141_2087334                                    7304  9 -     13745 CATC-T-TCAG
i Papio_papio.k141_2087334                               I 1 C 0
s Papio_ursinus.k141_4818248                                 14804  9 +     25215 CATC-T-TCAG
i Papio_ursinus.k141_4818248                             I 1 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42207  3 -     78924 --------GAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 4 C 0
s Perodicticus_ibeanus.k141_1387561                          11732  9 +     15382 AATT-T-TAAG
i Perodicticus_ibeanus.k141_1387561                      C 0 C 0
s Perodicticus_potto.k141_842195                             18282  9 -     21729 CATT-T-TAAG
i Perodicticus_potto.k141_842195                         C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13525  9 +     28765 CTTT-T-TAAA
i Perognathus_longimembris.PerPac_flattened_line_39705   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18245130  9 -  18517816 TATT-T-TAAT
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              38841  9 +     63832 catt-t-taag
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                           28758  9 -     55023 CATC-T-TCAG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64176  9 +     89929 CATC-T-TCAG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14267  9 -     40849 CATC-T-TCAG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326744  9 -  14605196 CATC-T-TCAG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                             19559  9 +     26961 CATC-T-TAAG
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15572  9 +     23417 CATC-T-TAAG
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19553  9 +     29694 CATC-T-TAAG
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44588  9 +     52772 CATC-T-TAAG
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19579  9 +     26198 CATC-T-TAAG
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3955914  9 +   4542175 CATC-T-TAAG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19506  9 -     23490 CATC-T-TAAG
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           5009  9 -      7527 catt-t-taag
i Platanista_gangetica.PlaMin_flattened_line_175331      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       22280  9 -     39866 TGTC-T-TAAG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        31438  9 +     34906 TGTC-T-TAAG
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       35701  9 +     87950 TGTC-T-TAAG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     36500  9 +     88961 TGTC-T-TAAG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         22193  9 +     39403 TGTC-T-TAAG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          35969  9 -     87928 TGTC-T-TAAG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         42950  9 +     60166 TGTC-T-TAAG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43143  9 +     67232 TGTC-T-TAAG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38608  9 +     90634 TGTC-T-TAAG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          35991  9 -     89403 TGTC-T-TAAG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189181967  9 + 189387572 TATC-T-TCAG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9596861  9 +   9816681 TATC-T-TCAG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              18343  9 -     69807 CATC-A-TCAG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              11705  9 +     80239 CATC-T-TCAG
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_112514                11589  9 +     16234 CATC-T-AAAG
i Procavia_capensis.ProCapCap_scaffold_112514            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2617006  9 -   4620579 CAAT-T-TAAG
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1013062  9 +   2598838 CATT-T-TAAG
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_114130                           9130  9 -     19127 catt-t-taag
i Propithecus_coronatus.k141_114130                      C 0 C 0
s Propithecus_diadema.k141_599139                            10224  9 +     10533 catt-t-taag
i Propithecus_diadema.k141_599139                        C 0 C 0
s Propithecus_edwardsi.k141_635656                             466  9 +     30655 catt-t-taag
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_217725                            2658  9 +     14082 catt-t-taag
i Propithecus_perrieri.k141_217725                       C 0 C 0
s Propithecus_tattersalli.k141_790011                        50343  9 -     67325 catt-t-taag
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7136  9 -     35169 catt-t-taag
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036367.1                            19329  4 -     31435 CATT-------
i Psammomys_obesus.NESX01036367.1                        C 0 I 5
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14194  9 +     25061 catt-t-taag
i Pteronura_brasiliensis.PteBra_flattened_line_42152     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20305867  4 -  38429054 cact-------
i Puma_concolor.QAVW01001104.1                           C 0 I 3
s Pygathrix_cinerea.k141_1153803                             40413  9 -     91421 CATC-T-TCAG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7634593  9 +   7812017 TATC-T-TCAG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             40455  9 -     72585 CATC-T-TCAG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31182  9 +     55207 CATT-T-TAAG
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53606088  7 +  90668790 --T--TGTAAT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_188731                            15661  9 -     21983 CATC-T-TCAG
i Rhinopithecus_bieti.k119_188731                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91262030  9 - 195417433 CATC-T-TCAG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7701121  9 +   7961872 CATC-T-TCAG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1241  9 -      3450 TATT-T-GAAG
i Saiga_tatarica.SaiTat_scaffold_455678                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119968416  9 - 121099817 TATC-T-TAAG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40708  9 +     46362 TATC-T-TAAG
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               40768  9 +     45824 TATC-T-TAAG
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             57436  9 -     64574 TATC-T-TAAG
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                              20530  9 -     23631 TATC-T-TAAG
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 40694  9 -     61129 TATC-T-TAAG
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5443738  9 -   5703754 TATC-T-TAAG
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          72977  9 -     80660 TATC-T-TAAG
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    177006  9 -    313613 tatt-c-taag
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1705875                         5661  9 +     17286 CATC-T-TCAG
i Semnopithecus_entellus.k141_1705875                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                       5786  9 -     58920 CATC-T-TCAG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                            5694  9 +     45317 CATC-T-TCAG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_960425                             5807  9 +      9426 CATC-T-TCAG
i Semnopithecus_priam.k141_960425                        C 0 C 0
s Semnopithecus_schistaceus.k141_972136                       5700  9 +     24620 CATC-T-TCAG
i Semnopithecus_schistaceus.k141_972136                  C 0 C 0
s Semnopithecus_vetulus.k141_654052                           1630  9 -      5251 CATC-T-TCAG
i Semnopithecus_vetulus.k141_654052                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                     4414  9 -     77746 TATT-T-TAAT
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126              23099  9 +   1910179 GATT-T-GATG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13682243  8 -  18376816 -ACT-T-GATG
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1976033  9 -   3870691 catt-t-taag
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             58979  9 +     97271 CATT-T-TAAG
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              47953  3 -    196729 --------GAG
i Suricata_suricatta.SurSur_flattened_line_6629          I 4 C 0
s Sus_scrofa.CM000828.4                                   63022722  9 -  69701581 catt-t-taaa
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1105199  9 -   1523678 TACC-T-TCAG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93752  9 +    116680 cagc-t-ggca
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138582  9 -    156842 catt-t-taag
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    407054  9 +    539355 catt-t-taag
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               50479  9 +     70052 TATC-T-TAAG
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_722827                               14871  9 +     18080 TATC-T-TAAG
i Tarsius_wallacei.k141_722827                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186466174  9 + 186847797 CATC-T-TCAG
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Tolypeutes_matacus.TolMat_scaffold_41106                    5704  8 +     27660 CAGC-T-GAC-
i Tolypeutes_matacus.TolMat_scaffold_41106               C 0 C 0
s Trachypithecus_auratus.k141_95322                          12176  9 -     15799 CATC-T-TCAG
i Trachypithecus_auratus.k141_95322                      C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     25543  9 +     78344 CATC-T-TCAG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_581431                       12347  9 -     15970 CATC-T-TCAG
i Trachypithecus_cristatus.k141_581431                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      11309  9 +     62838 CATC-T-TCAG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_119873                            12274  9 -     17556 CATC-T-TCAG
i Trachypithecus_geei.k141_119873                        C 0 C 0
s Trachypithecus_germaini.k141_545543                        12288  9 -     15912 CATC-T-TCAG
i Trachypithecus_germaini.k141_545543                    C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      11238  9 +     64340 CATC-T-TCAG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          12237  9 +     63452 CATC-T-TCAG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_283481                   11312  9 +     21341 CATC-T-TCAG
i Trachypithecus_leucocephalus.k141_283481               C 0 C 0
s Trachypithecus_melamera.k141_261742                         1374  9 +     11697 CATC-T-TCAG
i Trachypithecus_melamera.k141_261742                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                        13155  9 +     33539 CATC-T-TCAG
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5964983  9 +   6242583 CATC-T-TCAG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_583962                        13071  9 +     14028 CATC-T-TCAG
i Trachypithecus_pileatus.k141_583962                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                     4875  9 +    200418 catt-t-taag
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            4313677  9 +  10818551 CATT-T-TTAG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15765551  9 +  33153633 catt-t-taag
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     843  9 +     21056 tgtt-t-caag
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                               4878297  9 -   5085361 catt-t-taag
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  31696  9 +     50397 caat-t-taag
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1100575                              6785  9 +     25465 caat-t-taag
i Varecia_variegata.k141_1100575                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5390064  9 -   5488506 catt-t-taag
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 42818  9 -     43706 catt-t-taag
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                         24676  9 +    224448 CATT-T-TAAA
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29884  9 +     86975 catt-t-taag
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      38962  9 +     63895 AATT-T-TAAT
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 116 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21698  9 -     22999 catt-t-taag
i Ziphius_cavirostris.ZipCav_flattened_line_16896        C 0 C 0
e Erinaceus_europaeus.JH835339.1                           3365133 123 -   7059049 I
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Desmodus_rotundus.KZ672289.1                             8650437  3 +  20541912 I
e Carollia_perspicillata.CarPer_scaffold_737331                421  3 -       918 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                 26946  3 +     43469 I
e Tonatia_saurophila.TonSau_scaffold_294                    103728  3 +    610378 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                31530  0 +     41958 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17424  0 +    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                        389332  0 -   3329780 C
e Pteropus_vampyrus.KN525825.1                             1390053  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              23005967  0 +  28871421 C
e Pteronotus_parnellii.KE854991.1                             1663  0 -     11709 C
e Mus_pahari.LT608297.1                                   31390833 17 -  89631738 I
e Mormoops_blainvillei.MorMeg_scaffold_1417                 162106  0 -    366855 C
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_39861                18895  3 -     30105 I
e Megaderma_lyra.MegLyr_scaffold_4542                        36015  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                 24123  0 +    270270 C
e Hipposideros_galeritus.HipGal_scaffold_65612                9129  0 -     20285 C
e Hipposideros_armiger.JXIK01000431.1                       132216  0 +   1711038 C
e Eidolon_helvum.KE797349.1                                  19343  0 -     31197 C
e Craseonycteris_thonglongyai.CraTho_scaffold_153350           127  2 +      5041 I
e Anoura_caudifer.AnoCau_scaffold_1412                      209496  3 +    412891 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11191  5 +     36723 ACA--T------T
s Acinonyx_jubatus.LLWD01001279.1                           836472  5 +   1699592 gaa--t------c
i Acinonyx_jubatus.LLWD01001279.1                        I 3 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     10733  7 -     63021 GAATTC------C
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538416  5 -  29979442 gaa--t------t
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            107858  5 -    347723 aaa--t------t
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                     1422  7 +     61208 AAA--CT----CC
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   40755  5 -     52922 ACA--T------T
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          7077  5 +     11307 ACA--C------T
i Allochrocebus_lhoesti.k141_1932296                     C 0 C 0
s Allochrocebus_preussi.k141_499905                           7249  5 -     13300 ACA--T------T
i Allochrocebus_preussi.k141_499905                      C 0 C 0
s Allochrocebus_solatus.k141_139760                           9130  5 +     12926 ACA--T------T
i Allochrocebus_solatus.k141_139760                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             31794  5 +     51355 ACA--T------C
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               24940  5 -     36483 ACA--T------C
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              7045  5 -     13496 ACA--C------C
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23827  5 +     27940 ACA--C------C
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15635  5 -     39310 ACA--T------C
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            23893  5 +     30492 ACA--T------C
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28124  5 +     47717 ACA--T------C
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_2029433                            79096  5 +     87306 ACA--C------C
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             39078  5 +     50774 ACA--C------C
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707813  4 -   2318259 CAA--C-------
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303             27043  4 -     32520 GAA--C-------
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_2596348                                   5326  5 +     12024 ACA--T------C
i Aotus_azarae.k141_2596348                              C 0 C 0
s Aotus_griseimembra.k141_2227177                             4992  5 -     10972 ACA--T------C
i Aotus_griseimembra.k141_2227177                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4333453  5 -   5030052 ACA--T------C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_1801223                              5385  5 -     12698 aca--t------c
i Aotus_trivirgatus.k141_1801223                         C 0 C 0
s Aotus_vociferans.k141_506037                                4845  5 -     11998 ACA--T------C
i Aotus_vociferans.k141_506037                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22236  5 +     39421 gag--t------t
i Aplodontia_rufa.AprRuf_scaffold_37633                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       14318  5 +     45910 GAA--T------C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21232089  5 -  21539123 ACA--T------C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3161  5 -     48076 ACA--T------C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18627  5 -     22344 ACA--T------C
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31683  5 -     89868 ACA--T------C
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36096  5 -     40414 ACA--T------C
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                43930  5 +     72325 aca--t------c
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75689  5 -     92717 gaa--t------t
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              76272  5 +     85213 gaa--t------t
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222472  4 +  23207421 gaa--t-------
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4475  4 +     25979 gaa--t-------
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     12871  4 -    124022 GAA--T-------
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                    233049  4 -    288883 GAA--T-------
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20306424  4 +  48749331 gaa--t-------
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1159526  4 -   1948126 gaa--t-------
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18116636  4 +  45695690 gaa--t-------
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2852091  4 +   4408762 GAA--T-------
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                116953  5 -    122966 ACA--T------C
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76431  5 +     81800 ACA--T------C
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45636  5 -     95584 ACA--T------C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69731  5 -    119600 ACA--T------C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020460  3 -  17673402 gaa----------
i Camelus_bactrianus.KN276810.1                          C 0 I 1
s Camelus_dromedarius.KN272107.1                           2353290  3 -   7040546 gaa----------
i Camelus_dromedarius.KN272107.1                         C 0 I 1
s Camelus_ferus.KB017975.1                                  421549  3 -   1652518 gaa----------
i Camelus_ferus.KB017975.1                               C 0 I 1
s CanFam4.chr16                                           17831750  5 -  60362399 gaa--t------t
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32494  5 -     43241 gaa--t------t
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067218  5 -   9314153 gaa--t------t
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17991877  5 -  59632846 gaa--t------t
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18532983  5 +  63665305 gaa--t------t
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18861876  4 +  46296322 CAA--T-------
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18092594  4 -  44709034 CAA--T-------
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           179911  3 -    496798 AGG----------
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    167130  5 +    179628 GAA--T------T
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                    113427 11 +    217609 GAA--TTGTATTT
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 I 260
s Cebus_albifrons.Contig27                                25675575  5 +  26074798 aca--c------c
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               22043  5 +     28840 ACA--C------C
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7714  5 +     13997 ACA--C------C
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29835  3 +     31688 AGG----------
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12257258  5 +  27778364 gaa--t------t
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          2965  5 +     15641 gaa--t------t
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4501727  5 +   4669795 ACA--T------T
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_2766003                       22999  5 -     30935 ACA--T------T
i Cercocebus_chrysogaster.k141_2766003                   C 0 C 0
s Cercocebus_lunulatus.k141_245046                            7401  5 +     18174 ACA--T------T
i Cercocebus_lunulatus.k141_245046                       C 0 C 0
s Cercocebus_torquatus.k141_4063387                           7238  5 +     18249 ACA--T------T
i Cercocebus_torquatus.k141_4063387                      C 0 C 0
s Cercopithecus_ascanius.k141_4281816                         2359  5 -      5884 ACA--T------T
i Cercopithecus_ascanius.k141_4281816                    C 0 C 0
s Cercopithecus_cephus.k141_1630443                           1383  5 +      4620 ACA--T------T
i Cercopithecus_cephus.k141_1630443                      C 0 C 0
s Cercopithecus_diana.k141_488174                             7819  5 +     10982 ACA--T------T
i Cercopithecus_diana.k141_488174                        C 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1365  5 +      4810 ACA--T------T
i Cercopithecus_hamlyni.k141_1302205                     C 0 C 0
s Cercopithecus_lowei.k141_4082698                            7281  5 +     34178 ACA--T------T
i Cercopithecus_lowei.k141_4082698                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38849391  5 +  39242232 ACA--T------T
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21256184  5 -  21565898 ACA--T------T
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_557928                         7447  5 -     18401 ACA--T------T
i Cercopithecus_neglectus.k141_557928                    C 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7510  5 -     15013 ACA--T------T
i Cercopithecus_nictitans.k141_1200139                   C 0 C 0
s Cercopithecus_petaurista.k141_365908                        7481  5 +     11214 ACA--T------T
i Cercopithecus_petaurista.k141_365908                   C 0 C 0
s Cercopithecus_pogonias.k141_391400                          2301  5 -     13831 ACA--T------T
i Cercopithecus_pogonias.k141_391400                     C 0 C 0
s Cercopithecus_roloway.k141_1248991                         27475  5 +     68532 ACA--T------T
i Cercopithecus_roloway.k141_1248991                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             530  4 -      1897 -AA--C------C
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       C 0 C 0
s Cheirogaleus_major.k141_333249                             43680  5 -     52598 gaa--t------t
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           39011  5 +     57038 GAA--T------T
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Cheracebus_lucifer.k141_49986                               9851  5 -     17098 ACA--T------C
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9721  5 +     17877 ACA--T------C
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167288  5 -    216457 ACA--T------C
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71761  5 +     76511 ACA--T------C
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          113978  5 +    146308 ACA--A------C
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          45886  5 -     50570 ACA--A------C
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455259  5 -  18827391 ACA--T------T
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41202  5 -     50209 ACA--T------T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448184  5 + 135778131 ACA--T------T
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   758  5 -     25429 GAA--T------T
i Choloepus_didactylus.ChoDid_scaffold_22546             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            195886  5 +    839153 gaa--t------t
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               6731  5 -      9651 AAA--T------C
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          C 0 C 0
s Colobus_angolensis.KN981557.1                            1936125  5 +   2368649 AGA--T------T
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199970103  5 + 200372422 AGA--T------T
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              58417  5 +     84244 AGA--T------T
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17566324  5 -  53390261 GTC--T------T
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 16644  7 +     83289 GAACTT------C
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11697275  7 + 224834208 GAACTC------C
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_123729              8676  4 -      9007 CCC--C-------
i Crocidura_indochinensis.CroInd_scaffold_123729         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59189  5 -     87169 GAA--T------C
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 3 C 0
s Dasypus_novemcinctus.JH564415.1                            92334  4 +   2246927 -AA--G------C
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12562440  5 -  12879189 gaa--t------t
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16841623  4 +  35494412 gaa--t-------
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  699053  5 +   1390856 gaa--t------t
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                   31856  5 +    198055 gaa--t------t
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18914662  5 +  37912305 gaa--t------t
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_47531                  13260  5 -     26976 GAA--T------T
i Dipodomys_stephensi.DipSte_scaffold_47531              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       342050  4 +    607251 GAA--T-------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          47675  7 -    110024 GAACTC------C
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01050844.1                            8926  7 +     12610 CAACTC------C
i Ellobius_talpinus.LOJH01050844.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16365756  5 -  41312741 gaa--t------t
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1310362  4 +   4378816 gaa--t-------
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18557830  5 -  39960074 gaa--t------t
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               59871  5 +    498745 gaa--t------t
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erythrocebus_patas.Contig38                             21237465  5 -  21539334 ACA--T------T
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           40796  4 +    133382 gaa--t-------
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5098  4 -     25849 gaa--t-------
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_1869827                             12797  5 -     21348 GAA--T------T
i Eulemur_albifrons.k141_1869827                         C 0 C 0
s Eulemur_collaris.k141_601111                                9999  5 +     70999 gaa--t------t
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                               7738  5 -    112731 gaa--t------t
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                              6748  5 -     68309 gaa--t------t
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_2627385                                 3884  5 -      9374 gaa--t------t
i Eulemur_fulvus.k141_2627385                            C 0 C 0
s Eulemur_macaco.k141_1562045                                32979  5 +     75513 gaa--t------t
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 30863  5 +     97555 GAA--T------T
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            7519  5 -     30972 gaa--t------t
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_1120150                                  7396  5 +     16616 gaa--t------t
i Eulemur_rufus.k141_1120150                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              33981  5 +    111500 gaa--t------t
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20267626  5 + 206538554 gaa--t------c
i Felis_catus.CM001381.2                                 I 3 C 0
s Felis_catus_fca126.CM031415.1                           20226404  5 + 205367284 GAA--T------C
i Felis_catus_fca126.CM031415.1                          I 3 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  3414  5 -     25330 GAA--T------C
i Felis_nigripes.FelNig_flattened_line_44075             I 3 C 0
s Galago_moholi.ctg3793                                        805  5 +    137831 GAA--T------A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             1921  5 -     22493 GAA--T------A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_1153324                           11809  5 +     12379 GAA--T------C
i Galagoides_demidoff.k141_1153324                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_75343               15876  5 -     17176 gaa--t------t
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     636907  4 -    660261 GAA--T-------
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_149316                            5223  5 +      8016 aaa--t------T
i Glis_glis.GliGli_scaffold_149316                       I 154 C 0
s Gorilla_beringei.k141_179627                                 960  5 +      1068 ACA--T------T
i Gorilla_beringei.k141_179627                           I 20 C 0
s Gorilla_gorilla.LT578341.1                             186365073  5 + 186649187 ACA--T------T
i Gorilla_gorilla.LT578341.1                             I 38 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   54975  5 +     78134 aaa--t------a
i Graphiurus_murinus.GraMur_scaffold_10447               I 155 C 0
s Hapalemur_alaotrensis.k141_330369                           7393  5 +     40692 gaa--t------t
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_435261                             17081  5 +     22537 gaa--t------t
i Hapalemur_gilberti.k141_435261                         C 0 C 0
s Hapalemur_griseus.k141_679418                              15728  5 -     28566 gaa--t------t
i Hapalemur_griseus.k141_679418                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         14460  5 +     42923 gaa--t------t
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17715  5 +     53142 gaa--t------t
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               272875  5 +    327341 GAA--T------C
i Helogale_parvula.HelPar_flattened_line_2585            I 3 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14596  4 -     48891 caa--t-------
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10281  5 -     15841 GAA--T------C
i Heterohyrax_brucei.HetBruBak_scaffold_90013            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6493  4 +     36432 GAA--T-------
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hoolock_leuconedys.ctg274                                    460490  5 +    630532 ACA--T------T
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   8545  5 -     22022 GAA--T------C
i Hyaena_hyaena.HyaHya_flattened_line_62789              I 3 C 0
s Hylobates_agilis.k141_967383                                1759  5 -      4846 ACA--T------T
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                217  5 -      8919 ACA--T------T
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555188  5 - 191637585 ACA--T------T
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3348075  5 -  11177569 ACA--T------T
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543793  5 -   7955117 gaa--t------t
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_1997670                                    2220  5 +      8453 gaa--t------t
i Indri_indri.k141_1997670                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29215  4 -     31341 gaa--t-------
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8298687  7 -   9596543 aaa--c----tcc
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                  4966  4 +     97402 gaa--t-------
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         33160  5 -     38430 ACA--T------C
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544381  5 -  30322482 gaa--t------t
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_2922                            8765  5 -     24677 gaa--t------g
i Lepilemur_ankaranensis.k141_2922                       C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4734  5 -     31569 gaa--t------g
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                         22796  5 +     25010 gaa--t------g
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      48350  5 +     54090 gaa--t------g
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3074477  5 +   3914936 gaa--t------t
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_57262                     12912  2 -     23961 ca-----------
i Lepus_americanus.LepAme_scaffold_57262                 C 0 I 1
s Lipotes_vexillifer.KE559953.1                             299132  4 -    662738 gaa--t-------
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1464719  5 +   1826925 ACA--T------T
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2958567                            3811  5 -     22734 GAA--T------C
i Loris_lydekkerianus.k141_2958567                       C 0 C 0
s Loris_tardigradus.ctg83                                  1061239  5 +   6120653 GAA--T------C
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17988117  5 -  59628241 gaa--t------t
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              32977  5 +     40492 ACA--T------T
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59702902  5 +  60120075 ACA--T------T
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_794849                                 7096  5 +      8714 ACA--T------T
i Macaca_cyclopis.k119_794849                            C 0 C 0
s Macaca_fascicularis.k141_814140                           107530  5 -    114318 ACA--T------T
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_943731                                  7341  5 +     13165 ACA--T------T
i Macaca_fuscata.k119_943731                             C 0 C 0
s Macaca_leonina.k141_2438370                                12714  5 -     14632 ACA--T------T
i Macaca_leonina.k141_2438370                            C 0 C 0
s Macaca_maura.k141_515834                                   12872  5 +     14712 ACA--T------T
i Macaca_maura.k141_515834                               C 0 C 0
s Macaca_mulatta.NC_041758.1                             186866911  5 + 187317192 ACA--T------T
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25492026  5 -  25927173 ACA--T------T
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_128247                                   20342  5 +     98240 ACA--T------T
i Macaca_nigra.k141_128247                               C 0 C 0
s Macaca_radiata.k141_3254723                                 5884  5 +     10028 ACA--T------T
i Macaca_radiata.k141_3254723                            C 0 C 0
s Macaca_siberu.k141_1929020                                  7136  5 -      9047 ACA--T------T
i Macaca_siberu.k141_1929020                             C 0 C 0
s Macaca_silenus.Contig273                                  358145  5 -    668171 ACA--T------T
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_596453                                 1517  5 -      5469 ACA--T------T
i Macaca_thibetana.k99_596453                            C 0 C 0
s Macaca_tonkeana.k141_683787                                 7355  5 +      9199 ACA--T------T
i Macaca_tonkeana.k141_683787                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961795  5 -  24302211 ACA--T------T
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               377548  5 +    752769 ACA--T------T
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              40208  5 +    737560 gaa--t------c
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              72379  5 -    317179 gag--t------c
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33124860  5 -  40650429 gaa--t------t
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23295  5 +     74585 gaa--t------t
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 66072  7 +    140813 GAACTC------C
i Meriones_unguiculatus.MerUng_scaffold_7390             I 5 C 0
s Mesocricetus_auratus.KB708134.1                         12212376  7 -  29670104 GAACTC------C
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_74495                     4941  4 -     19186 gaa--t-------
i Mesoplodon_bidens.MesBid_scaffold_74495                C 0 C 0
s Microcebus_murinus.CM007674.1                           18313351  5 -  93316391 GAA--C------T
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_791330                           1668  5 -     13566 ACA--T------T
i Miopithecus_ogouensis.k141_791330                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        24916  5 +     26817 GAA--T------T
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    56869  4 -    437263 gaa--t-------
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32049  4 +     82753 gaa--t-------
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21455  5 +     63510 GAA--T------C
i Mungos_mungo.MunMun_flattened_line_18455               I 3 C 0
s Mus_pahari.LT608297.1                                   31390850  2 -  89631738 -----A------C
i Mus_pahari.LT608297.1                                  I 17 C 0
s Muscardinus_avellanarius.MusAve_scaffold_74954             15527  5 -     17106 aaa--t------t
i Muscardinus_avellanarius.MusAve_scaffold_74954         I 150 C 0
s Mustela_putorius.JH418006.1                               330508  5 -  14710649 gaa--t------t
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14246  5 -     28317 aaa--t------t
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 C 0
s Nasalis_larvatus.k141_970469                               18527  5 +     37058 ACA--T------T
i Nasalis_larvatus.k141_970469                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343469  5 +  31847680 gaa--t------t
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5894921  4 +   7148211 gaa--t-------
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9182007  5 -   9404916 gaa--t------t
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102653353  5 - 196305487 GAA--T------C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_921975                              9495  5 +     15238 GAA--T------C
i Nycticebus_coucang.k141_921975                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827842  5 + 199412804 GAA--T------C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              534019  5 -   2017862 gaa--t------t
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         168719  4 +    630418 GAA--T-------
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107600  4 -    150152 GAA--T-------
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25226  7 +    140218 GACCTC------C
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                   12383  7 +     41509 GAACCC------C
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  2812147  4 -  10937097 gaa--t-------
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1778  5 -      4812 gaa--t------t
i Orycteropus_afer.OryAfe_flattened_line_327065          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190517  1 + 174332312 ------------t
i Oryctolagus_cuniculus.CM000791.1                       I 2 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       495074  5 -    559221 gaa--t------t
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_187572                         4458  5 -      5557 GAA--T------C
i Otolemur_crassicaudatus.k141_187572                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             738111  5 -   1103335 GAA--T------C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17617529  4 +  44047080 CAA--T-------
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1530  4 -     13921 CAA--T-------
i Ovis_canadensis.OviCan_scaffold_75879                  C 0 C 0
s Pan_paniscus.KQ411608.1                                     3381  5 +     15831 ACA--T------T
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649195  5 + 189151597 ACA--T------T
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  181275  5 +    230217 gaa--t------c
i Panthera_onca.PanOnc_flattened_line_3271               I 3 C 0
s Panthera_pardus.KV860321.1                                296072  5 +  18783137 gaa--t------c
i Panthera_pardus.KV860321.1                             I 3 C 0
s Panthera_tigris.KE722367.1                               4751425  5 -   8748460 GAA--T------C
i Panthera_tigris.KE722367.1                             I 3 C 0
s Pantholops_hodgsonii.KE114653.1                          1296447  4 -   2937107 gaa--t-------
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183469968  5 + 183742232 ACA--T------T
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_703094                              6306  5 -     17637 ACA--T------T
i Papio_cynocephalus.k141_703094                         C 0 C 0
s Papio_hamadryas.Contig39                                20592465  5 +  20919399 ACA--T------T
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  31730  5 +     41871 ACA--T------T
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_2087334                                    7313  5 -     13745 ACA--T------T
i Papio_papio.k141_2087334                               C 0 C 0
s Papio_ursinus.k141_4818248                                 14813  5 +     25215 ACA--T------T
i Papio_ursinus.k141_4818248                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42210  5 -     78924 AAA--T------C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1387561                          11741  5 +     15382 GAA--T------C
i Perodicticus_ibeanus.k141_1387561                      C 0 C 0
s Perodicticus_potto.k141_842195                             18291  5 -     21729 GAA--T------C
i Perodicticus_potto.k141_842195                         C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13534  5 +     28765 GAA--T------T
i Perognathus_longimembris.PerPac_flattened_line_39705   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18245139  7 -  18517816 GAACCC------C
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              38850  4 +     63832 gaa--t-------
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                           28767  5 -     55023 ATA--T------T
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64185  5 +     89929 ACA--T------T
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14276  5 -     40849 ACA--T------T
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326753  5 -  14605196 ACA--T------T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                             19568  5 +     26961 ACA--T------C
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15581  5 +     23417 ACA--T------C
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19562  5 +     29694 ACA--T------C
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44597  5 +     52772 ACA--T------C
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19588  5 +     26198 ACA--T------C
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3955923  5 +   4542175 ACA--T------C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19515  5 -     23490 ACA--T------C
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           5018  4 -      7527 gaa--t-------
i Platanista_gangetica.PlaMin_flattened_line_175331      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       22289  5 -     39866 ACA--T------C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        31447  5 +     34906 ACA--T------C
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       35710  5 +     87950 ACA--T------C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     36509  5 +     88961 ACA--T------C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         22202  5 +     39403 ACA--T------C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          35978  5 -     87928 ACA--T------C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         42959  5 +     60166 ACA--T------C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43152  5 +     67232 ACA--T------C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38617  5 +     90634 ACA--T------C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          36000  5 -     89403 ACA--T------C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189181976  5 + 189387572 ACA--T------T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9596870  5 +   9816681 ACA--T------T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              18352  5 -     69807 ACA--T------T
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              11714  5 +     80239 ACA--T------T
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_112514                11598  5 +     16234 GAA--T------C
i Procavia_capensis.ProCapCap_scaffold_112514            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2617015  5 -   4620579 GAA--T------T
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1013071  5 +   2598838 GAA--T------T
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_114130                           9139  5 -     19127 gaa--t------t
i Propithecus_coronatus.k141_114130                      C 0 C 0
s Propithecus_diadema.k141_599139                            10233  5 +     10533 gaa--t------t
i Propithecus_diadema.k141_599139                        C 0 C 0
s Propithecus_edwardsi.k141_635656                             475  5 +     30655 gaa--t------t
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_217725                            2667  5 +     14082 gaa--t------t
i Propithecus_perrieri.k141_217725                       C 0 C 0
s Propithecus_tattersalli.k141_790011                        50352  5 -     67325 gaa--t------t
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7145  5 -     35169 gaa--t------t
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036367.1                            19338  7 -     31435 GAACTC------C
i Psammomys_obesus.NESX01036367.1                        I 5 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14203  5 +     25061 gaa--t------t
i Pteronura_brasiliensis.PteBra_flattened_line_42152     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20305874  5 -  38429054 gaa--t------c
i Puma_concolor.QAVW01001104.1                           I 3 C 0
s Pygathrix_cinerea.k141_1153803                             40422  5 -     91421 ACA--T------T
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7634602  5 +   7812017 ACA--T------T
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             40464  5 -     72585 ACA--T------T
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31191  4 +     55207 GAA--T-------
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53606095  7 +  90668790 GAACTC------C
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_188731                            15670  5 -     21983 ACA--T------T
i Rhinopithecus_bieti.k119_188731                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91262039  5 - 195417433 ACA--T------T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7701130  5 +   7961872 ACA--T------T
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1250  4 -      3450 GAA--T-------
i Saiga_tatarica.SaiTat_scaffold_455678                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119968425  5 - 121099817 ACA--C------C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40717  5 +     46362 ACA--C------C
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               40777  5 +     45824 ACA--C------C
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             57445  5 -     64574 ACA--C------C
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                              20539  5 -     23631 ACA--C------C
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 40703  5 -     61129 ACA--C------C
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5443747  5 -   5703754 ACA--C------C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          72986  5 -     80660 ACA--C------C
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    177015  5 -    313613 gta--t------t
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1705875                         5670  5 +     17286 ACA--T------T
i Semnopithecus_entellus.k141_1705875                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                       5795  5 -     58920 ACA--T------T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                            5703  5 +     45317 ACA--T------T
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_960425                             5816  5 +      9426 ACA--T------T
i Semnopithecus_priam.k141_960425                        C 0 C 0
s Semnopithecus_schistaceus.k141_972136                       5709  5 +     24620 ACA--T------T
i Semnopithecus_schistaceus.k141_972136                  C 0 C 0
s Semnopithecus_vetulus.k141_654052                           1639  5 -      5251 ACA--T------T
i Semnopithecus_vetulus.k141_654052                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                     4423  7 -     77746 GAATTC------T
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126              23108  5 +   1910179 TAC--T------G
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13682251  4 -  18376816 TCc--c-------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1976042  5 -   3870691 gaa--t------t
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             58988  5 +     97271 GAA--T------T
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              47956  5 -    196729 GAA--T------C
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   63022731 11 -  69701581 gaa--ttgtactt
i Sus_scrofa.CM000828.4                                  C 0 I 268
s Symphalangus_syndactylus.tarseq_199                      1105208  5 -   1523678 ACA--T------T
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93761  5 +    116680 aaa--t------t
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138591  5 -    156842 gaa--t------t
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    407063  5 +    539355 gaa--t------t
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               50488  3 +     70052 GGG----------
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_722827                               14880  3 +     18080 GGG----------
i Tarsius_wallacei.k141_722827                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186466183  5 + 186847797 ACA--T------T
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_41106                    5712  4 +     27660 -AA--C------T
i Tolypeutes_matacus.TolMat_scaffold_41106               C 0 C 0
s Trachypithecus_auratus.k141_95322                          12185  5 -     15799 ACA--T------T
i Trachypithecus_auratus.k141_95322                      C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     25552  5 +     78344 ACA--T------T
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_581431                       12356  5 -     15970 ACA--T------T
i Trachypithecus_cristatus.k141_581431                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      11318  5 +     62838 ACA--T------T
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_119873                            12283  5 -     17556 ACA--T------T
i Trachypithecus_geei.k141_119873                        C 0 C 0
s Trachypithecus_germaini.k141_545543                        12297  5 -     15912 ACA--T------T
i Trachypithecus_germaini.k141_545543                    C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      11247  5 +     64340 ACA--T------T
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          12246  5 +     63452 ACA--T------T
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_283481                   11321  5 +     21341 ACA--T------T
i Trachypithecus_leucocephalus.k141_283481               C 0 C 0
s Trachypithecus_melamera.k141_261742                         1383  5 +     11697 ACA--T------T
i Trachypithecus_melamera.k141_261742                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                        13164  5 +     33539 ACA--T------T
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5964992  5 +   6242583 ACA--T------T
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_583962                        13080  5 +     14028 ACA--T------T
i Trachypithecus_pileatus.k141_583962                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                     4884  4 +    200418 gaa--t-------
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15765560  4 +  33153633 gaa--t-------
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     852  5 +     21056 gat--t------c
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                               4878306  5 -   5085361 gaa--t------t
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  31705  5 +     50397 gaa--t------t
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1100575                              6794  5 +     25465 gaa--t------t
i Varecia_variegata.k141_1100575                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5390073  3 -   5488506 caa----------
i Vicugna_pacos.KN270157.1                               C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_30954                 42827  5 -     43706 gaa--t------t
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                         24685  5 +    224448 TAG--T------T
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29893  5 +     86975 gaa--t------t
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      38971  7 +     63895 CAA--CT----CA
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21707  4 -     22999 gaa--t-------
i Ziphius_cavirostris.ZipCav_flattened_line_16896        C 0 C 0
e Erinaceus_europaeus.JH835339.1                           3365133 123 -   7059049 I
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Desmodus_rotundus.KZ672289.1                             8650437  3 +  20541912 I
e Carollia_perspicillata.CarPer_scaffold_737331                421  3 -       918 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                 26946  3 +     43469 I
e Trichechus_manatus.JH594705.1                            4313686  0 +  10818551 C
e Tonatia_saurophila.TonSau_scaffold_294                    103728  3 +    610378 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                31530  0 +     41958 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17424  0 +    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                        389332  0 -   3329780 C
e Pteropus_vampyrus.KN525825.1                             1390053  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              23005967  0 +  28871421 C
e Pteronotus_parnellii.KE854991.1                             1663  0 -     11709 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 162106  0 -    366855 C
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_39861                18895  3 -     30105 I
e Megaderma_lyra.MegLyr_scaffold_4542                        36015  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                 24123  0 +    270270 C
e Hipposideros_galeritus.HipGal_scaffold_65612                9129  0 -     20285 C
e Hipposideros_armiger.JXIK01000431.1                       132216  0 +   1711038 C
e Eidolon_helvum.KE797349.1                                  19343  0 -     31197 C
e Craseonycteris_thonglongyai.CraTho_scaffold_153350           127  2 +      5041 I
e Anoura_caudifer.AnoCau_scaffold_1412                      209496  3 +    412891 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11196 12 +     36723 TGT--GCC----TTATC--C
s Acinonyx_jubatus.LLWD01001279.1                           836477 10 +   1699592 --t--gct----tCA--TCT
i Acinonyx_jubatus.LLWD01001279.1                        C 0 I 242
s Acomys_cahirinus.AcoCah_scaffold_21377                     10740  8 -     63021 T----ATT----TTAT----
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538421 12 -  29979442 tgt--gct----tca--tct
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            107863 12 -    347723 ttt--gct----tca--tct
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                     1429  8 +     61208 C----ACT----TCAT----
i Allactaga_bullata.AllBul_scaffold_20030                C 0 I 2
s Allenopithecus_nigroviridis.k141_3361533                   40760 12 -     52922 TCT--GCC----TCATC--C
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          7082 12 +     11307 TCT--GCC----TCATC--C
i Allochrocebus_lhoesti.k141_1932296                     C 0 C 0
s Allochrocebus_preussi.k141_499905                           7254 12 -     13300 TCT--GCC----TCATC--C
i Allochrocebus_preussi.k141_499905                      C 0 C 0
s Allochrocebus_solatus.k141_139760                           9135 12 +     12926 TCT--GCC----TCATC--C
i Allochrocebus_solatus.k141_139760                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             31799 12 +     51355 TGT--GAT----TTATC--C
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               24945 12 -     36483 TGT--GAT----TTATC--C
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              7050 12 -     13496 TAT--GAT----TTATC--C
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23832 12 +     27940 TAT--GAT----TTATC--C
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15640 12 -     39310 TGT--GAT----TTATC--C
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            23898 12 +     30492 TGT--GAT----TTATC--C
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28129 12 +     47717 TGT--AAT----TTATC--C
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_2029433                            79101 12 +     87306 TAT--GAT----TTATC--C
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             39083 12 +     50774 TAT--GAT----TTATC--C
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707817 10 -   2318259 TGT--ACT----TTA----T
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303             27047 10 -     32520 TGT--ACT----TTA----T
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_2596348                                   5331 12 +     12024 TGT--GCT----TTATC--C
i Aotus_azarae.k141_2596348                              C 0 C 0
s Aotus_griseimembra.k141_2227177                             4997 12 -     10972 TGT--GCT----TTATC--C
i Aotus_griseimembra.k141_2227177                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4333458 12 -   5030052 TGT--GCT----TTATC--C
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_1801223                              5390 12 -     12698 tgt--gct----ttatc--c
i Aotus_trivirgatus.k141_1801223                         C 0 C 0
s Aotus_vociferans.k141_506037                                4850 12 -     11998 TGT--GCT----TTATC--C
i Aotus_vociferans.k141_506037                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22241 12 +     39421 tgt--att----ttatc--c
i Aplodontia_rufa.AprRuf_scaffold_37633                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       14323 12 +     45910 TGT--GCC----TTATC--C
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21232094 12 -  21539123 TGT--GAT----TTATC--C
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3166 12 -     48076 TGT--GAT----TTATC--C
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18632 12 -     22344 TGT--GAT----TTATC--C
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31688 12 -     89868 TGT--GAT----TTATC--C
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36101 12 -     40414 TGT--GAT----TTATC--C
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                43935 12 +     72325 tgt--gat----ttatc--c
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75694 12 -     92717 tgt--gct----ttatc--c
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              76277 12 +     85213 tgt--gct----ttatc--c
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222476 10 +  23207421 tgt--act----tta----t
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4479 10 +     25979 tgt--act----tta----t
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     12875 10 -    124022 TGT--ACT----TTA----T
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                    233053 10 -    288883 TGT--ACT----TTA----T
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20306428 10 +  48749331 tgt--act----tta----t
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1159530 10 -   1948126 tgt--act----tta----t
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18116640 10 +  45695690 tgt--act----tta----t
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2852095 10 +   4408762 TGT--ACT----TTA----T
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                116958 12 -    122966 TGC--GCT----TTATC--C
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76436 12 +     81800 TGC--GCT----TTATC--C
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45641 12 -     95584 TGC--GCT----TTATC--C
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69736 12 -    119600 TGC--GCT----TTATC--C
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020464 10 -  17673402 tat--act----cta----t
i Camelus_bactrianus.KN276810.1                          I 1 I 2
s Camelus_dromedarius.KN272107.1                           2353294 10 -   7040546 tat--act----cta----t
i Camelus_dromedarius.KN272107.1                         I 1 I 2
s Camelus_ferus.KB017975.1                                  421553 10 -   1652518 tat--act----cta----t
i Camelus_ferus.KB017975.1                               I 1 I 2
s CanFam4.chr16                                           17831755 12 -  60362399 tgt--gct----tca--tct
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32499 12 -     43241 tgt--gct----tca--tct
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067223 12 -   9314153 tgt--gct----tca--tct
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17991882 12 -  59632846 tgt--gct----tca--tct
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18532988 12 +  63665305 tgt--gct----tca--tct
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18861880 10 +  46296322 TGT--ACT----TTA----T
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18092598 10 -  44709034 TGT--ACT----TCA----T
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           179914 12 -    496798 CAT--GAC----TGATC--C
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    167135 12 +    179628 TCC--ATT----TTATG--C
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                    113698 12 +    217609 TGT--GCT----TTA--TCC
i Catagonus_wagneri.CatWag_scaffold_2839                 I 260 C 0
s Cebus_albifrons.Contig27                                25675580 12 +  26074798 tgt--gct----ttatc--c
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               22048 12 +     28840 TGT--GCT----TTATC--C
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7719 12 +     13997 TGT--GCT----TTATC--C
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29838 12 +     31688 CAT--GAC----TGATC--C
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12257263 12 +  27778364 tgt--tct----tta--tcc
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          2970 12 +     15641 tgt--tct----tta--tcc
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4501732 12 +   4669795 TCT--CCC----TCATC--C
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_2766003                       23004 12 -     30935 TCT--CCC----TCATC--C
i Cercocebus_chrysogaster.k141_2766003                   C 0 C 0
s Cercocebus_lunulatus.k141_245046                            7406 12 +     18174 TCT--CCC----TCATC--C
i Cercocebus_lunulatus.k141_245046                       C 0 C 0
s Cercocebus_torquatus.k141_4063387                           7243 12 +     18249 TCT--CCC----TCATC--C
i Cercocebus_torquatus.k141_4063387                      C 0 C 0
s Cercopithecus_ascanius.k141_4281816                         2364 12 -      5884 TGT--GCC----TCATC--C
i Cercopithecus_ascanius.k141_4281816                    C 0 C 0
s Cercopithecus_cephus.k141_1630443                           1388 12 +      4620 TGT--GCC----TCATC--C
i Cercopithecus_cephus.k141_1630443                      C 0 C 0
s Cercopithecus_diana.k141_488174                             7824 12 +     10982 TCT--ACC----TCATC--C
i Cercopithecus_diana.k141_488174                        C 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1370 12 +      4810 TCT--GCC----TCATC--C
i Cercopithecus_hamlyni.k141_1302205                     C 0 C 0
s Cercopithecus_lowei.k141_4082698                            7286 12 +     34178 TGT--GCC----TCATC--C
i Cercopithecus_lowei.k141_4082698                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38849396 12 +  39242232 TGT--GCC----TCATC--C
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21256189 12 -  21565898 TGT--GCC----TCATC--C
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_557928                         7452 12 -     18401 TCT--GCC----TCATC--C
i Cercopithecus_neglectus.k141_557928                    C 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7515 12 -     15013 TGT--GCC----TCATC--C
i Cercopithecus_nictitans.k141_1200139                   C 0 C 0
s Cercopithecus_petaurista.k141_365908                        7486 12 +     11214 TGT--GCC----TCATC--C
i Cercopithecus_petaurista.k141_365908                   C 0 C 0
s Cercopithecus_pogonias.k141_391400                          2306 12 -     13831 TGT--GCC----TCATC--C
i Cercopithecus_pogonias.k141_391400                     C 0 C 0
s Cercopithecus_roloway.k141_1248991                         27480 12 +     68532 TGT--GCC----TCATC--C
i Cercopithecus_roloway.k141_1248991                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             534 12 -      1897 TGC--GCT----CTGTC--C
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       C 0 C 0
s Cheirogaleus_major.k141_333249                             43685 12 -     52598 tgt--gct----ttgtc--c
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           39016 12 +     57038 TGT--GCT----TTATC--C
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Cheracebus_lucifer.k141_49986                               9856 12 -     17098 TGC--GCT----TTAGC--C
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9726 12 +     17877 TGC--GCT----TTAGC--C
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167293 12 -    216457 TGC--GCT----TTAGC--C
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71766 12 +     76511 TGC--GCT----TTAGC--C
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          113983 12 +    146308 TGC--GCT----TTATC--C
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          45891 12 -     50570 TGC--GCT----TTATC--C
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455264 12 -  18827391 TCT--GCC----TCATC--C
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41207 12 -     50209 TCT--GCC----TCATC--C
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448189 12 + 135778131 TCT--GCC----TCATC--C
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   763 12 -     25429 TGT--GCT----TTATC--C
i Choloepus_didactylus.ChoDid_scaffold_22546             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            195891 12 +    839153 tgt--gct----ttatc--c
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               6736 12 -      9651 TGT--ACT----TTATC--C
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          C 0 C 0
s Colobus_angolensis.KN981557.1                            1936130 12 +   2368649 TCT--GCC----TCATC--C
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199970108 12 + 200372422 TCT--GCC----TCATC--C
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              58422 12 +     84244 TCT--GCC----TCATC--C
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17566329 12 -  53390261 TGT--GCT----TTA--TCC
i Condylura_cristata.JH655891.1                          C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 16651  8 +     83289 C----ACT----TTAT----
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 2
s Cricetulus_griseus.LT883664.1                           11697282  8 + 224834208 C----ACT----CTAT----
i Cricetulus_griseus.LT883664.1                          C 0 I 2
s Crocidura_indochinensis.CroInd_scaffold_123729              8680  6 -      9007 --T--ATA----TT------
i Crocidura_indochinensis.CroInd_scaffold_123729         C 0 T 185
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59194 12 -     87169 --TGTGCT----TCA--TCT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 I 231
s Dasypus_novemcinctus.JH564415.1                            92338 12 +   2246927 TGC--GCT----CTGtc--c
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12562445 12 -  12879189 tgt--gct----ttatc--c
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16841627 10 +  35494412 tgt--act----tta----t
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  699058 12 +   1390856 tgt--gct----tta--tcc
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                   31861 12 +    198055 tgt--gct----tta--tcc
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dipodomys_ordii.KN672350.1                              18914667 12 +  37912305 tcc--act----ttacc--c
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_47531                  13265 12 -     26976 TCC--ACT----TTACC--C
i Dipodomys_stephensi.DipSte_scaffold_47531              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       342054 10 +    607251 TAT--ACT----TTA----T
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          47682  8 -    110024 T----ACT----CTAT----
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 2
s Ellobius_talpinus.LOJH01050844.1                            8933  8 +     12610 T----ACT----CTAT----
i Ellobius_talpinus.LOJH01050844.1                       C 0 I 2
s Enhydra_lutris.KZ291758.1                               16365761 12 -  41312741 tgt--gct----tca--tct
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1310366 12 +   4378816 tgt--gct----tta--tcc
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18557835 12 -  39960074 tgt--gct----tta--tcc
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               59876 12 +    498745 tgt--gct----tta--tcc
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3365256  1 -   7059049 -------------------c
i Erinaceus_europaeus.JH835339.1                         I 123 C 0
s Erythrocebus_patas.Contig38                             21237470 12 -  21539334 TCT--GCC----TCATC--C
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           40800 10 +    133382 tgt--act----tta----t
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5102 10 -     25849 tgt--act----tta----t
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_1869827                             12802 12 -     21348 TGG--GCT----TTATC--C
i Eulemur_albifrons.k141_1869827                         C 0 C 0
s Eulemur_collaris.k141_601111                               10004 12 +     70999 tgg--gct----ttatc--c
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                               7743 12 -    112731 tgg--gct----ttatc--c
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                              6753 12 -     68309 tgg--gct----ttatc--c
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_2627385                                 3889 12 -      9374 tgg--gct----ttatc--c
i Eulemur_fulvus.k141_2627385                            C 0 C 0
s Eulemur_macaco.k141_1562045                                32984 12 +     75513 tgg--gct----ttatc--c
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 30868 12 +     97555 TGG--GCT----TTATC--C
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            7524 12 -     30972 tgg--gct----ttatc--c
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_1120150                                  7401 12 +     16616 tgg--gct----ttatc--c
i Eulemur_rufus.k141_1120150                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              33986 12 +    111500 tgg--gct----ttatc--c
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20267631 10 + 206538554 --t--gct----tCA--TCT
i Felis_catus.CM001381.2                                 C 0 I 229
s Felis_catus_fca126.CM031415.1                           20226409 10 + 205367284 --T--GCT----TCA--TCT
i Felis_catus_fca126.CM031415.1                          C 0 I 233
s Felis_nigripes.FelNig_flattened_line_44075                  3419 10 -     25330 --T--GCT----TCA--TCT
i Felis_nigripes.FelNig_flattened_line_44075             C 0 I 249
s Galago_moholi.ctg3793                                        810 12 +    137831 TGT--GCT----TTATC--C
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             1926 12 -     22493 TGT--GCT----TTATC--C
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_1153324                           11814 12 +     12379 TGT--GCT----TTATC--C
i Galagoides_demidoff.k141_1153324                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_75343               15881 12 -     17176 tgc--act----ttatc--c
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     636911 10 -    660261 TGT--ACT----TTA----T
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_149316                            5228 12 +      8016 TGT--ACT----TCATC--C
i Glis_glis.GliGli_scaffold_149316                       C 0 C 0
s Gorilla_beringei.k141_179627                                 965 12 +      1068 TGT--GCC----TTATC--C
i Gorilla_beringei.k141_179627                           C 0 C 0
s Gorilla_gorilla.LT578341.1                             186365078 12 + 186649187 TGT--GCC----TTATC--C
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   54980 12 +     78134 ata--att----tcatC--C
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                           7398 12 +     40692 tgg--gct----ttatc--c
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_435261                             17086 12 +     22537 tgg--gct----ttatc--c
i Hapalemur_gilberti.k141_435261                         C 0 C 0
s Hapalemur_griseus.k141_679418                              15733 12 -     28566 tgg--gct----ttatc--c
i Hapalemur_griseus.k141_679418                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         14465 12 +     42923 tgg--gct----ttatc--c
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17720 12 +     53142 tgg--gct----ttatc--c
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               272880 12 +    327341 --TGTGCG----TCA--TCT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 I 233
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14600 10 -     48891 tgt--act----tta----t
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10286 12 -     15841 TGT--CCT----TTATC--C
i Heterohyrax_brucei.HetBruBak_scaffold_90013            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6497 10 +     36432 TGC--ACT----TTA----T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hoolock_leuconedys.ctg274                                    460495 12 +    630532 TGT--GCC----TTATC--C
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   8550 10 -     22022 --T--GCT----TCA--TCC
i Hyaena_hyaena.HyaHya_flattened_line_62789              C 0 I 438
s Hylobates_agilis.k141_967383                                1764 12 -      4846 TGT--GCC----TTATC--C
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                222 12 -      8919 TGT--GCC----TTATC--C
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555193 12 - 191637585 TGT--GCC----TTATC--C
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3348080 12 -  11177569 TGT--GCC----TTATC--C
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543798  9 -   7955117 -----att----ttatc--c
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_1997670                                    2225 12 +      8453 tgt--gct----ttatc--c
i Indri_indri.k141_1997670                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29219 10 -     31341 ttt--act----tta----t
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8298694  8 -   9596543 t----aCT----TCAT----
i Jaculus_jaculus.JH725527.1                             C 0 I 2
s Kogia_breviceps.KogBre_flattened_line_3970                  4970 10 +     97402 tgt--act----tta----t
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         33165 12 -     38430 TGT--GAT----TTATC--C
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544386 12 -  30322482 tgg--gct----ttatc--c
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_2922                            8770 12 -     24677 tgt--gct----ttatc--c
i Lepilemur_ankaranensis.k141_2922                       C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4739 12 -     31569 tgt--gct----ttatc--c
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                         22801 12 +     25010 tgt--gct----ttatc--c
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      48355 12 +     54090 tgt--gct----ttatc--c
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3074482 12 +   3914936 tgt--gct----tca--tct
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_57262                     12915 14 -     23961 tgtacact----ttatc--c
i Lepus_americanus.LepAme_scaffold_57262                 I 1 C 0
s Lipotes_vexillifer.KE559953.1                             299136 10 -    662738 tgt--act----tta----c
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1464724 12 +   1826925 TCT--CCC----TCATC--C
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2958567                            3816 12 -     22734 TAT--GCT----TTATC--C
i Loris_lydekkerianus.k141_2958567                       C 0 C 0
s Loris_tardigradus.ctg83                                  1061244 12 +   6120653 TAT--GCT----TTATC--C
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17988122 12 -  59628241 tgt--gct----tca--tct
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              32982 12 +     40492 TGT--GCC----TCATC--C
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59702907 12 +  60120075 TGT--GCC----TCATC--C
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_794849                                 7101 12 +      8714 TGT--GCC----TCATC--C
i Macaca_cyclopis.k119_794849                            C 0 C 0
s Macaca_fascicularis.k141_814140                           107535 12 -    114318 TGT--GCC----TCATC--C
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_943731                                  7346 12 +     13165 TGT--GCC----TCATC--C
i Macaca_fuscata.k119_943731                             C 0 C 0
s Macaca_leonina.k141_2438370                                12719 12 -     14632 TGT--GCC----TCATC--C
i Macaca_leonina.k141_2438370                            C 0 C 0
s Macaca_maura.k141_515834                                   12877 12 +     14712 TGT--GCC----TCATC--C
i Macaca_maura.k141_515834                               C 0 C 0
s Macaca_mulatta.NC_041758.1                             186866916 12 + 187317192 TGT--GCC----TCATC--C
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25492031 12 -  25927173 TGT--GCC----TCATC--C
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_128247                                   20347 12 +     98240 TGT--GCC----TCATC--C
i Macaca_nigra.k141_128247                               C 0 C 0
s Macaca_radiata.k141_3254723                                 5889 12 +     10028 TGT--GCC----TCATC--C
i Macaca_radiata.k141_3254723                            C 0 C 0
s Macaca_siberu.k141_1929020                                  7141 12 -      9047 TGT--GCC----TCATC--C
i Macaca_siberu.k141_1929020                             C 0 C 0
s Macaca_silenus.Contig273                                  358150 12 -    668171 TGT--GCC----TCATC--C
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_596453                                 1522 12 -      5469 TGT--GCC----TCATC--C
i Macaca_thibetana.k99_596453                            C 0 C 0
s Macaca_tonkeana.k141_683787                                 7360 12 +      9199 TGT--GCC----TCATC--C
i Macaca_tonkeana.k141_683787                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961800 12 -  24302211 TCT--CCC----TCATC--C
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               377553 12 +    752769 TCT--CCC----TCATC--C
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              40213 12 +    737560 tgc--act----cca--tcc
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              72384 12 -    317179 tgc--act----cca--tcc
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33124865  9 -  40650429 -----att----ttata--c
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23300 12 +     74585 tgt--gct----tca--tct
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 66079  8 +    140813 T----ACC----TTAT----
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 2
s Mesocricetus_auratus.KB708134.1                         12212383  8 -  29670104 C----ACT----CTAT----
i Mesocricetus_auratus.KB708134.1                        C 0 I 2
s Mesoplodon_bidens.MesBid_scaffold_74495                     4945 10 -     19186 tgt--act----tta----t
i Mesoplodon_bidens.MesBid_scaffold_74495                C 0 C 0
s Microcebus_murinus.CM007674.1                           18313356 12 -  93316391 TGT--GCT----TTATC--C
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_791330                           1673 12 -     13566 TGT--GCC----TCGTC--C
i Miopithecus_ogouensis.k141_791330                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        24921 12 +     26817 TGT--GCT----TCA--TCT
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    56873 10 -    437263 tgt--act----tta----t
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32053 10 +     82753 ttt--act----tta----c
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21460 12 +     63510 --TGTGCG----TCA--TCT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 I 233
s Mus_pahari.LT608297.1                                   31390852  8 -  89631738 A----ACT----TTAT----
i Mus_pahari.LT608297.1                                  C 0 I 2
s Muscardinus_avellanarius.MusAve_scaffold_74954             15532 12 -     17106 tgt--tct----TCATC--C
i Muscardinus_avellanarius.MusAve_scaffold_74954         C 0 C 0
s Mustela_putorius.JH418006.1                               330513 12 -  14710649 tgt--gct----tca--tct
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14251 12 -     28317 tgt--gct----gtatc--c
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 C 0
s Nasalis_larvatus.k141_970469                               18532 12 +     37058 TCT--GCC----TCATC--C
i Nasalis_larvatus.k141_970469                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343474 12 +  31847680 tgt--gct----tca--tct
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5894925 10 +   7148211 tgt--act----tta----t
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9182012 12 -   9404916 tgt--gtt----tca--tct
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102653358 12 - 196305487 TAT--GCT----TTATC--C
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_921975                              9500 12 +     15238 TAT--GCT----TTATC--C
i Nycticebus_coucang.k141_921975                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827847 12 + 199412804 TAT--GCT----TTATC--C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              534024 12 -   2017862 cgt--gct----tca--tct
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         168723 10 +    630418 TAT--ACT----TTA----T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107604 10 -    150152 TGT--ACT----TTA----T
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25233  8 +    140218 T----ACT----CTAA----
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 2
s Onychomys_torridus.OnyTor_scaffold_28377                   12390  8 +     41509 C----ATT----TGAT----
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 2
s Orcinus_orca.KB316932.1                                  2812151 10 -  10937097 tgt--act----tta----t
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1783 12 -      4812 tgt--gct----ttatc--c
i Orycteropus_afer.OryAfe_flattened_line_327065          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190518 14 + 174332312 tgtaaact----ttatc--c
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       495079 12 -    559221 tgt--gtt----tca--tct
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_187572                         4463 12 -      5557 TGT--GCT----TTATC--C
i Otolemur_crassicaudatus.k141_187572                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             738116 12 -   1103335 TGT--GCT----TTATC--C
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17617533 10 +  44047080 TGT--ACT----TTA----T
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1534 10 -     13921 TGT--ACT----TTA----T
i Ovis_canadensis.OviCan_scaffold_75879                  C 0 C 0
s Pan_paniscus.KQ411608.1                                     3386 12 +     15831 TGT--GCC----TTATC--C
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649200 12 + 189151597 TGT--GCC----TTATC--C
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  181280 10 +    230217 --t--gct----tCA--TCT
i Panthera_onca.PanOnc_flattened_line_3271               C 0 I 254
s Panthera_pardus.KV860321.1                                296077 10 +  18783137 --t--gct----tCA--TCT
i Panthera_pardus.KV860321.1                             C 0 I 246
s Panthera_tigris.KE722367.1                               4751430 10 -   8748460 --T--GCT----TCA--TCT
i Panthera_tigris.KE722367.1                             C 0 I 250
s Pantholops_hodgsonii.KE114653.1                          1296451 10 -   2937107 tat--act----tta----t
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183469973 12 + 183742232 TCT--CCC----TCATC--C
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_703094                              6311 12 -     17637 TCT--CCC----TCATC--C
i Papio_cynocephalus.k141_703094                         C 0 C 0
s Papio_hamadryas.Contig39                                20592470 12 +  20919399 TCT--CCC----TCATC--C
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  31735 12 +     41871 TCT--CCT----TCATC--C
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_2087334                                    7318 12 -     13745 TCT--CCC----TCATC--C
i Papio_papio.k141_2087334                               C 0 C 0
s Papio_ursinus.k141_4818248                                 14818 12 +     25215 TCT--CCC----TCATC--C
i Papio_ursinus.k141_4818248                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42215 10 -     78924 --T--GCT----TCA--TCT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 I 236
s Perodicticus_ibeanus.k141_1387561                          11746 12 +     15382 CGT--GCT----TTATC--C
i Perodicticus_ibeanus.k141_1387561                      C 0 C 0
s Perodicticus_potto.k141_842195                             18296 12 -     21729 CGT--GCT----TTATC--C
i Perodicticus_potto.k141_842195                         C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13539 12 +     28765 TCC--ACT----TTACC--T
i Perognathus_longimembris.PerPac_flattened_line_39705   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18245146  8 -  18517816 C----ATT----TGAT----
i Peromyscus_maniculatus.KI615324.1                      C 0 I 2
s Phocoena_phocoena.PhoPho_flattened_line_24159              38854 10 +     63832 tgt--act----tta----t
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                           28772 12 -     55023 TCT--GCC----TCATC--C
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64190 12 +     89929 TCT--GCC----TCATC--C
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14281 12 -     40849 TCT--GCC----TCATC--C
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326758 12 -  14605196 TCT--GCC----TCATC--C
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                             19573 12 +     26961 TGC--GCT----TTATC--C
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15586 12 +     23417 TGC--GCT----TTATC--C
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19567 12 +     29694 TGC--GCT----TTATC--C
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44602 12 +     52772 TGC--GCT----TTATC--C
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19593 12 +     26198 TGC--GCT----TTATC--C
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3955928 12 +   4542175 TGC--GCT----TTATC--C
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19520 12 -     23490 TGC--GCT----TTATC--C
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           5022 10 -      7527 tgt--act----tta----t
i Platanista_gangetica.PlaMin_flattened_line_175331      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       22294 12 -     39866 GGC--GCT----TTATC--C
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        31452 12 +     34906 GGC--GCT----TTATC--C
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       35715 12 +     87950 GGC--GCT----TTATC--C
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     36514 12 +     88961 GGC--GCT----TTATC--C
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         22207 12 +     39403 GGC--GCT----TTATC--C
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          35983 12 -     87928 GGC--GCT----TTATC--C
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         42964 12 +     60166 GGC--ACT----TTATC--C
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43157 12 +     67232 GGC--GCT----TTATC--C
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38622 12 +     90634 GGC--GCT----TTATC--C
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          36005 12 -     89403 GGC--GCT----TTATC--C
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189181981 12 + 189387572 TGT--GCC----TTATG--T
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9596875 12 +   9816681 TGT--GCC----TTATG--T
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              18357 12 -     69807 TCT--GCC----TCATC--C
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              11719 12 +     80239 TCT--GCC----TCATC--C
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_112514                11603 12 +     16234 TGT--CCT----TTATC--C
i Procavia_capensis.ProCapCap_scaffold_112514            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2617020 12 -   4620579 TGG--GCT----TTATc--c
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1013076 12 +   2598838 TGT--GCT----TTatc--c
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_114130                           9144 12 -     19127 tgt--gct----ttatc--c
i Propithecus_coronatus.k141_114130                      C 0 C 0
s Propithecus_diadema.k141_599139                            10238 12 +     10533 tgt--gct----ttatc--c
i Propithecus_diadema.k141_599139                        C 0 C 0
s Propithecus_edwardsi.k141_635656                             480 12 +     30655 tgt--gct----ttatc--c
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_217725                            2672 12 +     14082 tgt--gct----ttatc--c
i Propithecus_perrieri.k141_217725                       C 0 C 0
s Propithecus_tattersalli.k141_790011                        50357 12 -     67325 tgt--gct----ttatc--c
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7150 12 -     35169 tgt--gct----ttatc--c
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036367.1                            19345  8 -     31435 T----ACC----TTAT----
i Psammomys_obesus.NESX01036367.1                        C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14208 12 +     25061 tgt--gct----tca--tct
i Pteronura_brasiliensis.PteBra_flattened_line_42152     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20305879 10 -  38429054 --t--gct----tCA--TCT
i Puma_concolor.QAVW01001104.1                           C 0 I 256
s Pygathrix_cinerea.k141_1153803                             40427 12 -     91421 TCT--GCC----TCATC--C
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7634607 12 +   7812017 TCT--GCC----TCATC--C
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             40469 12 -     72585 TCT--GCC----TCATC--C
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31195 10 +     55207 TAT--ACT----TTA----T
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53606102  8 +  90668790 T----ACT----TTAT----
i Rattus_norvegicus.chr16                                C 0 I 2
s Rhinopithecus_bieti.k119_188731                            15675 12 -     21983 TCT--GCC----TCATC--C
i Rhinopithecus_bieti.k119_188731                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91262044 12 - 195417433 TCT--GCC----TCATC--C
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7701135 12 +   7961872 TCT--GCC----TCATC--C
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1254 10 -      3450 TGC--ACT----TTA----T
i Saiga_tatarica.SaiTat_scaffold_455678                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119968430 12 - 121099817 TGT--GCT----TTACC--C
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40722 12 +     46362 TGT--GCT----TTACC--C
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               40782 12 +     45824 TGT--GCT----TTACC--C
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             57450 12 -     64574 TGT--GCT----TTACC--C
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                              20544 12 -     23631 TGT--GCT----TTACC--C
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 40708 12 -     61129 TGT--GCT----TTACC--C
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5443752 12 -   5703754 TGT--GCT----TTATC--C
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          72991 12 -     80660 TGT--GCT----TTATC--C
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    177020 12 -    313613 tgg--gct----tta--tct
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1705875                         5675 12 +     17286 TCT--GCC----TCATC--C
i Semnopithecus_entellus.k141_1705875                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                       5800 12 -     58920 TCT--GCC----TCATC--C
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                            5708 12 +     45317 TCT--GCC----TCATC--C
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_960425                             5821 12 +      9426 TCT--GCC----TCATC--C
i Semnopithecus_priam.k141_960425                        C 0 C 0
s Semnopithecus_schistaceus.k141_972136                       5714 12 +     24620 TCT--GCC----TCATC--C
i Semnopithecus_schistaceus.k141_972136                  C 0 C 0
s Semnopithecus_vetulus.k141_654052                           1644 12 -      5251 TCT--GCC----TCATC--C
i Semnopithecus_vetulus.k141_654052                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                     4430  8 -     77746 C----ACT----CTAC----
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 2
s Solenodon_paradoxus.SolPar_flattened_line_126              23113  9 +   1910179 TGT--GCT----TTA-----
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13682255  6 -  18376816 --t--act----cc------
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1976047  9 -   3870691 -----att----ttatc--c
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             58993 12 +     97271 TGT--GCT----TCA--TCT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              47961 12 -    196729 --TGTGCG----TCA--TCT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 I 232
s Sus_scrofa.CM000828.4                                   63023010 12 -  69701581 tgt--act----tta--tcc
i Sus_scrofa.CM000828.4                                  I 268 C 0
s Symphalangus_syndactylus.tarseq_199                      1105213 12 -   1523678 TAT--GCC----TTATC--C
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93766 12 +    116680 tgt--gct----gcatc--c
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138596 16 -    156842 tgt--gcataaatta--tcc
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    407068 16 +    539355 tgt--gcataaatta--tcc
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               50491 12 +     70052 CAT--GAT----TTATC--C
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_722827                               14883 12 +     18080 CAT--GAT----TTATC--C
i Tarsius_wallacei.k141_722827                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186466188 12 + 186847797 TCT--CCC----TCATC--C
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_41106                    5716 12 +     27660 TGT--GCT----CTGTC--C
i Tolypeutes_matacus.TolMat_scaffold_41106               C 0 C 0
s Trachypithecus_auratus.k141_95322                          12190 12 -     15799 TCT--GCC----TCATC--C
i Trachypithecus_auratus.k141_95322                      C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     25557 12 +     78344 TCT--GCC----TCACC--C
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_581431                       12361 12 -     15970 TCT--GCC----TCATC--C
i Trachypithecus_cristatus.k141_581431                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      11323 12 +     62838 TCT--GCC----TCATC--C
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_119873                            12288 12 -     17556 TCT--GCC----TCATC--C
i Trachypithecus_geei.k141_119873                        C 0 C 0
s Trachypithecus_germaini.k141_545543                        12302 12 -     15912 TCT--GCC----TCATC--C
i Trachypithecus_germaini.k141_545543                    C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      11252 12 +     64340 TCT--GCC----TCATC--C
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          12251 12 +     63452 TCT--GCC----TCATC--C
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_283481                   11326 12 +     21341 TCT--GCC----TCATC--C
i Trachypithecus_leucocephalus.k141_283481               C 0 C 0
s Trachypithecus_melamera.k141_261742                         1388 12 +     11697 TCT--GCC----TCATC--C
i Trachypithecus_melamera.k141_261742                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                        13169 12 +     33539 TCT--GCC----TCATC--C
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5964997 12 +   6242583 TCT--GCC----TCACC--C
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_583962                        13085 12 +     14028 TCT--GCC----TCATC--C
i Trachypithecus_pileatus.k141_583962                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                     4888 10 +    200418 tct--act----tta----t
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15765564 10 +  33153633 tgt--act----tta----t
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     857 12 +     21056 tgg--act----tta--ccc
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                               4878311 12 -   5085361 tgt--gct----tca--tct
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  31710 12 +     50397 tgg--gct----tcatc--c
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1100575                              6799 12 +     25465 tgg--gct----tcatc--c
i Varecia_variegata.k141_1100575                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5390077 10 -   5488506 tat--act----cta----t
i Vicugna_pacos.KN270157.1                               I 1 I 2
s Vulpes_lagopus.VulLag_flattened_line_30954                 42832 12 -     43706 tgt--gtt----tca--tct
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                         24690  9 +    224448 -----ACT----TTATC--C
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29898 12 +     86975 tgt--gct----tca--tct
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      38978  8 +     63895 C----ACT----TCAT----
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21711 10 -     22999 tgt--act----tta----t
i Ziphius_cavirostris.ZipCav_flattened_line_16896        C 0 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Desmodus_rotundus.KZ672289.1                             8650437  3 +  20541912 I
e Carollia_perspicillata.CarPer_scaffold_737331                421  3 -       918 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                 26946  3 +     43469 I
e Trichechus_manatus.JH594705.1                            4313686  0 +  10818551 C
e Tonatia_saurophila.TonSau_scaffold_294                    103728  3 +    610378 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                31530  0 +     41958 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17424  0 +    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                        389332  0 -   3329780 C
e Pteropus_vampyrus.KN525825.1                             1390053  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              23005967  0 +  28871421 C
e Pteronotus_parnellii.KE854991.1                             1663  0 -     11709 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 162106  0 -    366855 C
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_39861                18895  3 -     30105 I
e Megaderma_lyra.MegLyr_scaffold_4542                        36015  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                 24123  0 +    270270 C
e Hipposideros_galeritus.HipGal_scaffold_65612                9129  0 -     20285 C
e Hipposideros_armiger.JXIK01000431.1                       132216  0 +   1711038 C
e Eidolon_helvum.KE797349.1                                  19343  0 -     31197 C
e Craseonycteris_thonglongyai.CraTho_scaffold_153350           127  2 +      5041 I
e Anoura_caudifer.AnoCau_scaffold_1412                      209496  3 +    412891 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11208 12 +     36723 AAA--GAG--AA-------------AT-GG
s Acinonyx_jubatus.LLWD01001279.1                           836729 12 +   1699592 aaa--gag--at-------------gt-gT
i Acinonyx_jubatus.LLWD01001279.1                        I 242 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     10750 12 -     63021 AAA--GAG--AA-------------AT-AG
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538433 12 -  29979442 gaa--gag--ac-------------at-gt
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            107875 12 -    347723 aaa--gag--ac-------------at-gt
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                     1439 12 +     61208 ACA--GGG--AA-------------AT-GG
i Allactaga_bullata.AllBul_scaffold_20030                I 2 C 0
s Allenopithecus_nigroviridis.k141_3361533                   40772 12 -     52922 AAA--GAG--AA-------------AT-GG
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          7094 12 +     11307 AAA--GAG--AG-------------AT-GG
i Allochrocebus_lhoesti.k141_1932296                     C 0 C 0
s Allochrocebus_preussi.k141_499905                           7266 12 -     13300 AAA--GAG--AG-------------AT-GG
i Allochrocebus_preussi.k141_499905                      C 0 C 0
s Allochrocebus_solatus.k141_139760                           9147 12 +     12926 AAA--GAA--AG-------------AT-GG
i Allochrocebus_solatus.k141_139760                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             31811 12 +     51355 AAA--GAG--AA-------------AT-GG
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               24957 12 -     36483 AAA--GAG--AA-------------AT-GG
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              7062 12 -     13496 TAA--GAG--AA-------------AT-GG
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23844 12 +     27940 TAA--GAG--AA-------------AT-GG
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15652 12 -     39310 AAA--GAG--AA-------------AT-GG
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            23910 12 +     30492 AAA--GAG--AA-------------AT-GG
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28141 12 +     47717 GAA--GAG--AA-------------AT-GG
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_2029433                            79113 12 +     87306 TAA--GAG--AA-------------AT-GG
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             39095 12 +     50774 TAA--GAG--AA-------------AT-GG
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707827 14 -   2318259 CCAAAGAG--AA-------------AC-AG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303             27057 14 -     32520 CCAAAGAG--AA-------------AA-AG
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_2596348                                   5343 12 +     12024 AAA--GAG--AA-------------AT-GG
i Aotus_azarae.k141_2596348                              C 0 I 20
s Aotus_griseimembra.k141_2227177                             5009 12 -     10972 GAA--AAG--AA-------------AT-GG
i Aotus_griseimembra.k141_2227177                        C 0 I 21
s Aotus_nancymaae.KZ198451.1                               4333470 12 -   5030052 GAA--GAG--AA-------------AT-GG
i Aotus_nancymaae.KZ198451.1                             C 0 I 21
s Aotus_trivirgatus.k141_1801223                              5402 12 -     12698 gaa--gag--aa-------------at-gg
i Aotus_trivirgatus.k141_1801223                         C 0 I 21
s Aotus_vociferans.k141_506037                                4862 12 -     11998 GAA--GAG--AA-------------AT-GG
i Aotus_vociferans.k141_506037                           C 0 I 21
s Aplodontia_rufa.AprRuf_scaffold_37633                      22253 12 +     39421 aaa--gag--aa-------------at-gg
i Aplodontia_rufa.AprRuf_scaffold_37633                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       14335 12 +     45910 AAA--GAG--AA-------------AT-GT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21232106 12 -  21539123 GAA--GAG--AA-------------AT-GG
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3178 12 -     48076 GAA--GAG--AA-------------AT-GG
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18644 12 -     22344 GAA--GAG--AA-------------AT-GG
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31700 12 -     89868 GAA--GAG--AA-------------AT-GG
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36113 12 -     40414 GAA--GAG--AA-------------AT-GG
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                43947 12 +     72325 gaa--gag--aa-------------at-gg
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75706 12 -     92717 aaa--gag--aa-------------aa-ag
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              76289 12 +     85213 aaa--gag--aa-------------aa-ag
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222486 14 +  23207421 ccaaagag--aa-------------at-gg
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4489 14 +     25979 ccaaagag--aa-------------gt-gg
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     12885 14 -    124022 CCAAAGAG--AA-------------AC-AG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                    233063 14 -    288883 CCAAAGAG--AA-------------AC-AA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20306438 14 +  48749331 ccaaagag--aa-------------ac-ag
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1159540 14 -   1948126 ccaaagag--aa-------------ac-ag
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18116650 14 +  45695690 ccaaagag--aa-------------ac-ag
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2852105 14 +   4408762 CCAAAGAG--AA-------------AC-AG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                116970 12 -    122966 GAA--GAG--AA-------------AC-GG
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76448 12 +     81800 GAA--GAG--AA-------------AC-GG
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45653 12 -     95584 GAA--GAG--AA-------------AC-GG
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69748 12 -    119600 GAA--GAG--AA-------------AC-GG
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020476 10 -  17673402 aaa----g--aa-------------at-gg
i Camelus_bactrianus.KN276810.1                          I 2 C 0
s Camelus_dromedarius.KN272107.1                           2353306 10 -   7040546 aaa----g--aa-------------at-gg
i Camelus_dromedarius.KN272107.1                         I 2 C 0
s Camelus_ferus.KB017975.1                                  421565 10 -   1652518 aaa----g--aa-------------at-gg
i Camelus_ferus.KB017975.1                               I 2 C 0
s CanFam4.chr16                                           17831767 12 -  60362399 aaa--gag--aa-------------at-gt
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32511 12 -     43241 aaa--gag--aa-------------at-gt
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067235 12 -   9314153 aaa--gag--aa-------------at-gt
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17991894 12 -  59632846 aaa--gag--aa-------------at-gt
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18533000 12 +  63665305 aaa--gag--aa-------------at-gt
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18861890 14 +  46296322 CCAAAGAG--AA-------------AC-AG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18092608 11 -  44709034 CCAAAGAG--AA-------------A----
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           179926 11 -    496798 -AA--GAG--AA-------------GT-GA
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    167147 12 +    179628 AAA--GAA--AA-------------AT-GT
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                    113710 12 +    217609 AAA--GAG--AA-------------AG-GG
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebus_albifrons.Contig27                                25675592 12 +  26074798 aaa--gag--aa-------------at-gg
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               22060 12 +     28840 AAA--GAG--AA-------------AT-GG
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7731 12 +     13997 AAA--GAG--AA-------------AT-GG
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29850 11 +     31688 -AA--GAG--AA-------------GT-GA
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12257275 12 +  27778364 aaa--gag--aa-------------at-gg
i Ceratotherium_simum.JH767749.1                         C 0 I 8
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          2982 12 +     15641 aaa--gag--aa-------------at-gg
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     C 0 I 8
s Cercocebus_atys.KQ010504.1                               4501744 12 +   4669795 AAT--GAG--AA-------------AT-GG
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_2766003                       23016 12 -     30935 AAA--GAG--AA-------------AT-GG
i Cercocebus_chrysogaster.k141_2766003                   C 0 C 0
s Cercocebus_lunulatus.k141_245046                            7418 12 +     18174 AAA--GAG--AA-------------AT-GG
i Cercocebus_lunulatus.k141_245046                       C 0 C 0
s Cercocebus_torquatus.k141_4063387                           7255 12 +     18249 AAA--GAG--AA-------------AT-GG
i Cercocebus_torquatus.k141_4063387                      C 0 C 0
s Cercopithecus_ascanius.k141_4281816                         2376 12 -      5884 AAA--GAG--AA-------------AT-GG
i Cercopithecus_ascanius.k141_4281816                    C 0 C 0
s Cercopithecus_cephus.k141_1630443                           1400 12 +      4620 AAA--GAG--AA-------------AT-GG
i Cercopithecus_cephus.k141_1630443                      C 0 C 0
s Cercopithecus_diana.k141_488174                             7836 12 +     10982 AAA--GAG--AA-------------AT-GG
i Cercopithecus_diana.k141_488174                        C 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1382 12 +      4810 AAA--GAG--AA-------------AT-GG
i Cercopithecus_hamlyni.k141_1302205                     C 0 C 0
s Cercopithecus_lowei.k141_4082698                            7298 12 +     34178 AAA--GAG--AA-------------AT-GG
i Cercopithecus_lowei.k141_4082698                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38849408 12 +  39242232 AAA--GAG--AA-------------AT-GG
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21256201 12 -  21565898 AAA--GAG--AA-------------AT-GG
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_557928                         7464 12 -     18401 AAA--GAG--AA-------------AT-GG
i Cercopithecus_neglectus.k141_557928                    C 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7527 12 -     15013 AAA--GAG--AA-------------AT-GG
i Cercopithecus_nictitans.k141_1200139                   C 0 C 0
s Cercopithecus_petaurista.k141_365908                        7498 12 +     11214 AAA--GAG--AA-------------AT-GG
i Cercopithecus_petaurista.k141_365908                   C 0 C 0
s Cercopithecus_pogonias.k141_391400                          2318 12 -     13831 AAA--GAG--AA-------------AT-GG
i Cercopithecus_pogonias.k141_391400                     C 0 C 0
s Cercopithecus_roloway.k141_1248991                         27492 12 +     68532 AAA--GAG--AA-------------AT-GG
i Cercopithecus_roloway.k141_1248991                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             546 12 -      1897 TAA--GAG--GA-------------GC-AG
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       C 0 C 0
s Cheirogaleus_major.k141_333249                             43697 12 -     52598 aaa--gag--aa-------------aa-gg
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           39028 12 +     57038 AAA--GAG--AA-------------AA-GG
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Cheracebus_lucifer.k141_49986                               9868 12 -     17098 GAA--GAG--AA-------------AC-GG
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9738 12 +     17877 GAA--GAG--AA-------------AC-GG
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167305 12 -    216457 GAA--GAG--AA-------------AC-AG
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71778 12 +     76511 GAA--GAG--AA-------------AC-AG
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          113995 12 +    146308 GAA--GAG--AA-------------AT-GG
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          45903 12 -     50570 GAA--GAG--AA-------------AT-GG
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455276 12 -  18827391 AAA--GAG--AA-------------AT-GG
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41219 12 -     50209 AAA--GAG--AA-------------AT-GG
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448201 12 + 135778131 AAA--GAG--AA-------------AT-GG
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   775 12 -     25429 AAA--GAG--AA-------------AT-GG
i Choloepus_didactylus.ChoDid_scaffold_22546             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            195903 12 +    839153 aaa--gag--aa-------------at-gg
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               6748 12 -      9651 AAA--GAA--AA-------------AT-TT
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          C 0 C 0
s Colobus_angolensis.KN981557.1                            1936142 12 +   2368649 AAA--GAG--AA-------------AT-GG
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199970120 12 + 200372422 AAA--GAG--AA-------------AG-GG
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              58434 12 +     84244 AAA--GAG--AA-------------AT-GG
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17566341 12 -  53390261 TAA--GAG--AA-------------AT-TG
i Condylura_cristata.JH655891.1                          C 0 I 563
s Cricetomys_gambianus.CriGam_scaffold_14425                 16661 12 +     83289 AAG--GAG--AA-------------AT-GG
i Cricetomys_gambianus.CriGam_scaffold_14425             I 2 C 0
s Cricetulus_griseus.LT883664.1                           11697292 12 + 224834208 GAA--GAG--AA-------------GT-GG
i Cricetulus_griseus.LT883664.1                          I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_522851                60  4 +      2245 -------------------------ct-gg
i Crocidura_indochinensis.CroInd_scaffold_522851         n 185 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59437 12 -     87169 AAA--GAG--AC-------------AT-GT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         I 231 C 0
s Dasypus_novemcinctus.JH564415.1                            92350 12 +   2246927 aaa--cag--ac-------------ac-ag
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12562457 12 -  12879189 aaa--gag--aa-------------ag-gg
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16841637 14 +  35494412 ccaaagag--aa-------------ac-gg
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  699070 12 +   1390856 aaa--gag--aa-------------ac-gg
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 8
s Diceros_bicornis.DicBicMic_scaffold_5955                   31873 12 +    198055 aaa--gag--aa-------------at-gg
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 8
s Dipodomys_ordii.KN672350.1                              18914679 12 +  37912305 aaa--gag--aa-------------aa-at
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_47531                  13277 12 -     26976 AAA--GAG--AA-------------AA-AT
i Dipodomys_stephensi.DipSte_scaffold_47531              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       342064 14 +    607251 CCAAAGAG--AA-------------AC-AA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          47692 12 -    110024 AAA--GAG--AA-------------GC-AA
i Ellobius_lutescens.LOEQ01008920.1                      I 2 C 0
s Ellobius_talpinus.LOJH01050844.1                            8943 12 +     12610 GAA--GAG--AA-------------GC-AG
i Ellobius_talpinus.LOJH01050844.1                       I 2 C 0
s Enhydra_lutris.KZ291758.1                               16365773 12 -  41312741 aaa--gag--ac-------------at-gt
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1310378 12 +   4378816 aaa--gag--ag-------------at-gg
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18557847 12 -  39960074 aaa--gag--ag-------------at-gg
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               59888 12 +    498745 aaa--gag--ag-------------at-gg
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3365257 12 -   7059049 aga--gag--aa-------------at-gg
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21237482 12 -  21539334 AAA--GAG--AA-------------AT-GG
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           40810 14 +    133382 ccaaagag--aa-------------gt-gg
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5112 14 -     25849 ccaaagag--aa-------------at-gg
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_1869827                             12814 12 -     21348 AAA--GAG--AA-------------AA-GG
i Eulemur_albifrons.k141_1869827                         C 0 C 0
s Eulemur_collaris.k141_601111                               10016 12 +     70999 aaa--gag--aa-------------aa-gg
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                               7755 12 -    112731 aaa--gag--aa-------------aa-gg
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                              6765 12 -     68309 aaa--gag--aa-------------aa-gg
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_2627385                                 3901 12 -      9374 aaa--gag--aa-------------aa-gg
i Eulemur_fulvus.k141_2627385                            C 0 C 0
s Eulemur_macaco.k141_1562045                                32996 12 +     75513 aaa--gag--aa-------------aa-gg
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 30880 13 +     97555 AAA--GAG--AA-------------AAAGG
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            7536 12 -     30972 aaa--gat--aa-------------aa-gg
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_1120150                                  7413 12 +     16616 aaa--gag--aa-------------aa-gg
i Eulemur_rufus.k141_1120150                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              33998 12 +    111500 aaa--gag--aa-------------aa-gg
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20267870 12 + 206538554 aaa--tag--at-------------gt-gT
i Felis_catus.CM001381.2                                 I 229 C 0
s Felis_catus_fca126.CM031415.1                           20226652 12 + 205367284 aaa--tag--at-------------gt-gT
i Felis_catus_fca126.CM031415.1                          I 233 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  3678 12 -     25330 aga--tag--at-------------gt-gt
i Felis_nigripes.FelNig_flattened_line_44075             I 249 C 0
s Galago_moholi.ctg3793                                        822 10 +    137831 A----GAG--AA-------------AT-GT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             1938 10 -     22493 A----GAG--AA-------------AT-GT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_1153324                           11826 12 +     12379 AAT--GAG--AA-------------AT-GT
i Galagoides_demidoff.k141_1153324                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_75343               15893 12 -     17176 aaa--gag--aa-------------at-gg
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     636921 14 -    660261 CCAAAGAG--AA-------------AC-AG
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_149316                            5240 12 +      8016 AAA--GAG--AA-------------AC-TG
i Glis_glis.GliGli_scaffold_149316                       C 0 C 0
s Gorilla_beringei.k141_179627                                 977 12 +      1068 AAA--GAG--AA-------------AT-GG
i Gorilla_beringei.k141_179627                           C 0 C 0
s Gorilla_gorilla.LT578341.1                             186365090 12 + 186649187 AAA--GAG--AA-------------AT-GG
i Gorilla_gorilla.LT578341.1                             C 0 I 42
s Graphiurus_murinus.GraMur_scaffold_10447                   54992 12 +     78134 AAA--GAG--AA-------------AT-GA
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                           7410 12 +     40692 aaa--gag--aa-------------aa-gg
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_435261                             17098 12 +     22537 aaa--gag--aa-------------aa-gg
i Hapalemur_gilberti.k141_435261                         C 0 C 0
s Hapalemur_griseus.k141_679418                              15745 12 -     28566 aaa--gag--aa-------------aa-gg
i Hapalemur_griseus.k141_679418                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         14477 12 +     42923 aaa--gag--aa-------------aa-gg
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17732 12 +     53142 aaa--gag--aa-------------aa-gg
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               273125 12 +    327341 AAA--GAC--AT-------------GT-AT
i Helogale_parvula.HelPar_flattened_line_2585            I 233 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14610 14 -     48891 ccaaagag--aa-------------ac-ag
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10298 12 -     15841 AAA--GAG--TA-------------AT-GG
i Heterohyrax_brucei.HetBruBak_scaffold_90013            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6507 14 +     36432 CCAAAGAG--AA-------------GT-GG
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hoolock_leuconedys.ctg274                                    460507 12 +    630532 AAA--GAG--AA-------------AC-GG
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   8998 12 -     22022 AAA--GAG--AC-------------AT-GT
i Hyaena_hyaena.HyaHya_flattened_line_62789              I 438 C 0
s Hylobates_agilis.k141_967383                                1776 12 -      4846 AAA--GAG--AA-------------AC-GG
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                234 12 -      8919 AAA--GAG--AA-------------AC-GG
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555205 12 - 191637585 AAA--GAG--AA-------------AC-GG
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3348092 12 -  11177569 AAA--GAG--AA-------------AC-GG
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543807 12 -   7955117 aaa--gag--aa-------------at-gg
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_1997670                                    2237 12 +      8453 aaa--gag--aa-------------aa-ag
i Indri_indri.k141_1997670                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29229 14 -     31341 ccaaagag--aa-------------ac-gg
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8298704 12 -   9596543 TAA--GAG--AA-------------AT-TG
i Jaculus_jaculus.JH725527.1                             I 2 I 10
s Kogia_breviceps.KogBre_flattened_line_3970                  4980 14 +     97402 ccaaggag--aa-------------at-gg
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         33177 12 -     38430 GAA--GAG--AA-------------AT-GG
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544398 12 -  30322482 aaa--gag--aa-------------aa-gg
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_2922                            8782 12 -     24677 aaa--gaa--aa-------------aa-gg
i Lepilemur_ankaranensis.k141_2922                       C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4751 12 -     31569 aaa--gaa--aa-------------aa-gg
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                         22813 12 +     25010 aaa--gaa--aa-------------aa-gg
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      48367 12 +     54090 aaa--gaa--aa-------------aa-gg
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3074494 12 +   3914936 aca----gagac-------------at-gt
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_57262                     12929 12 -     23961 aaa--gag--aa-------------at-gg
i Lepus_americanus.LepAme_scaffold_57262                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             299146 14 -    662738 ccaaagag--aa-------------gt-gg
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1464736 12 +   1826925 AAA--GAG--AA-------------AT-GG
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2958567                            3828 12 -     22734 AAA--GAG--AA-------------AT-TT
i Loris_lydekkerianus.k141_2958567                       C 0 C 0
s Loris_tardigradus.ctg83                                  1061256 12 +   6120653 AAA--GAG--AA-------------AT-TT
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17988134 12 -  59628241 aaa--gag--aa-------------at-gt
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              32994 12 +     40492 AAA--GAG--AA-------------AT-AA
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59702919 12 +  60120075 AAA--GAG--AA-------------AT-AA
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_794849                                 7113 12 +      8714 AAA--GAG--AA-------------AT-AG
i Macaca_cyclopis.k119_794849                            C 0 C 0
s Macaca_fascicularis.k141_814140                           107547 12 -    114318 AAA--GAG--AA-------------AT-AG
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_943731                                  7358 12 +     13165 AAA--GAG--AA-------------AT-AG
i Macaca_fuscata.k119_943731                             C 0 C 0
s Macaca_leonina.k141_2438370                                12731 12 -     14632 AAA--GAG--AA-------------AT-AG
i Macaca_leonina.k141_2438370                            C 0 C 0
s Macaca_maura.k141_515834                                   12889 12 +     14712 AAA--GAG--AA-------------AT-AG
i Macaca_maura.k141_515834                               C 0 C 0
s Macaca_mulatta.NC_041758.1                             186866928 12 + 187317192 AAA--GAG--AA-------------AT-AG
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25492043 12 -  25927173 AAA--GAG--AA-------------AT-AG
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_128247                                   20359 12 +     98240 AAA--GAG--AA-------------AT-AG
i Macaca_nigra.k141_128247                               C 0 C 0
s Macaca_radiata.k141_3254723                                 5901 12 +     10028 AAA--GAG--AA-------------AT-AG
i Macaca_radiata.k141_3254723                            C 0 C 0
s Macaca_siberu.k141_1929020                                  7153 12 -      9047 AAA--GAG--AA-------------AT-AG
i Macaca_siberu.k141_1929020                             C 0 C 0
s Macaca_silenus.Contig273                                  358162 12 -    668171 AAA--GAG--AA-------------AT-AG
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_596453                                 1534 12 -      5469 AAA--GAG--AA-------------AT-AG
i Macaca_thibetana.k99_596453                            C 0 C 0
s Macaca_tonkeana.k141_683787                                 7372 12 +      9199 AAA--GAG--AA-------------AT-AG
i Macaca_tonkeana.k141_683787                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961812 12 -  24302211 AAA--GAG--AA-------------AT-GG
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               377565 12 +    752769 AAA--GAG--AA-------------AT-GG
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              40225 12 +    737560 aaa--gag--aa-------------at-gg
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              72396 12 -    317179 aaa--gag--aa-------------at-gg
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33124874 12 -  40650429 aaa--gag--aa-------------at-gg
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23312 12 +     74585 aaa--gag--ac-------------at-gt
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 66089 12 +    140813 AAA--CAG--AA-------------AA-GA
i Meriones_unguiculatus.MerUng_scaffold_7390             I 2 I 16
s Mesocricetus_auratus.KB708134.1                         12212393 12 -  29670104 GAG--GAG--AA-------------GT-GG
i Mesocricetus_auratus.KB708134.1                        I 2 C 0
s Mesoplodon_bidens.MesBid_scaffold_74495                     4955 14 -     19186 ccaaagag--aa-------------at-gg
i Mesoplodon_bidens.MesBid_scaffold_74495                C 0 C 0
s Microcebus_murinus.CM007674.1                           18313368 12 -  93316391 ACA--GAG--AA-------------AA-GG
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_791330                           1685 12 -     13566 AAA--GAG--AA-------------AT-GG
i Miopithecus_ogouensis.k141_791330                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        24933 12 +     26817 ACA----GAGAC-------------AT-GT
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    56883 14 -    437263 ccaaagag--aa-------------ac-gg
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32063 14 +     82753 ccaaagag--aa-------------ac-ag
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21705 12 +     63510 AAA--GAG--AC-------------GT-GT
i Mungos_mungo.MunMun_flattened_line_18455               I 233 C 0
s Mus_pahari.LT608297.1                                   31390862 12 -  89631738 AAA--GAG--AA-------------AT-GA
i Mus_pahari.LT608297.1                                  I 2 C 0
s Muscardinus_avellanarius.MusAve_scaffold_74954             15544 12 -     17106 AAA--GAG--AA-------------GC-AA
i Muscardinus_avellanarius.MusAve_scaffold_74954         C 0 C 0
s Mustela_putorius.JH418006.1                               330525 12 -  14710649 aaa--gag--ac-------------at-gt
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14263 12 -     28317 aaa--ggg--aa-------------at-gg
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 C 0
s Nasalis_larvatus.k141_970469                               18544 12 +     37058 AAA--GAG--AA-------------AT-GG
i Nasalis_larvatus.k141_970469                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343486 12 +  31847680 aca----gagac-------------at-gt
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5894935 14 +   7148211 ccaaagag--aa-------------ac-gg
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9182024 12 -   9404916 aaa--gag--aa-------------at-gt
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102653370 12 - 196305487 AAA--GAG--AA-------------AT-GT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_921975                              9512 12 +     15238 AAA--GAG--AA-------------AT-GT
i Nycticebus_coucang.k141_921975                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827859 12 + 199412804 AAA--GAG--AA-------------AT-GT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              534036 10 -   2017862 aca----g--ac-------------gt-gt
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         168733 14 +    630418 CCAAAGAG--AA-------------AC-AA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107614 14 -    150152 CCAAAGAG--AA-------------AC-AG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25243 12 +    140218 AAA--GAG--AA-------------GT-AG
i Ondatra_zibethicus.OndZib_scaffold_7387                I 2 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                   12400 12 +     41509 AAA--GAG--AA-------------AT-GG
i Onychomys_torridus.OnyTor_scaffold_28377               I 2 C 0
s Orcinus_orca.KB316932.1                                  2812161 14 -  10937097 ccaaagag--aa-------------ac-gg
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1795 12 -      4812 aaa--gag--aa-------------at-gg
i Orycteropus_afer.OryAfe_flattened_line_327065          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190532 12 + 174332312 aaa--gag--aa-------------at-gg
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       495091 12 -    559221 aat--gag--aa-------------at-gt
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_187572                         4475 12 -      5557 AAA--GAG--AA-------------AT-GT
i Otolemur_crassicaudatus.k141_187572                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             738128 12 -   1103335 AAA--GAG--AA-------------AT-GT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17617543 14 +  44047080 CCAAAGAG--AA-------------AC-AG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1544 14 -     13921 CCAAAGAG--AA-------------AC-AG
i Ovis_canadensis.OviCan_scaffold_75879                  C 0 C 0
s Pan_paniscus.KQ411608.1                                     3398 12 +     15831 AAA--GAG--AA-------------AT-GG
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649212 12 + 189151597 AAA--GAG--AA-------------AT-GG
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  181544 12 +    230217 AAA--GAG--AT-------------GT-GT
i Panthera_onca.PanOnc_flattened_line_3271               I 254 C 0
s Panthera_pardus.KV860321.1                                296333 12 +  18783137 aaa--gag--at-------------gt-gT
i Panthera_pardus.KV860321.1                             I 246 C 0
s Panthera_tigris.KE722367.1                               4751690 12 -   8748460 aaa--gag--at-------------gt-gT
i Panthera_tigris.KE722367.1                             I 250 C 0
s Pantholops_hodgsonii.KE114653.1                          1296461 14 -   2937107 ccaaagag--aa-------------ac-ag
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183469985 12 + 183742232 AAA--GAG--AA-------------AT-GG
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_703094                              6323 12 -     17637 AAA--GAG--AA-------------AT-GG
i Papio_cynocephalus.k141_703094                         C 0 C 0
s Papio_hamadryas.Contig39                                20592482 12 +  20919399 AAA--GAG--AA-------------AT-GG
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  31747 12 +     41871 AAA--GAG--AA-------------AT-GG
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_2087334                                    7330 12 -     13745 AAA--GAG--AA-------------AT-GG
i Papio_papio.k141_2087334                               C 0 C 0
s Papio_ursinus.k141_4818248                                 14830 12 +     25215 AAA--GAG--AA-------------AT-GG
i Papio_ursinus.k141_4818248                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42461 12 -     78924 AGA--CAG--AC-------------AC-GT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 I 236 C 0
s Perodicticus_ibeanus.k141_1387561                          11758 12 +     15382 AAA--GAG--AA-------------AT-GT
i Perodicticus_ibeanus.k141_1387561                      C 0 C 0
s Perodicticus_potto.k141_842195                             18308 12 -     21729 AAA--GAG--AA-------------AT-GT
i Perodicticus_potto.k141_842195                         C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13551 12 +     28765 AAA--GAG--AA-------------AG-GG
i Perognathus_longimembris.PerPac_flattened_line_39705   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18245156 12 -  18517816 AAA--GAG--AA-------------GT-GG
i Peromyscus_maniculatus.KI615324.1                      I 2 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              38864 14 +     63832 ccaaagag--aa-------------at-gg
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                           28784 12 -     55023 AAA--GAG--AA-------------AT-GG
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64202 12 +     89929 AAA--GAG--AA-------------AT-GG
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14293 12 -     40849 AAA--GAG--AA-------------AT-GG
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326770 12 -  14605196 AAA--GAG--AA-------------AT-GG
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                             19585 12 +     26961 GAA--GAG--AA-------------AC-GG
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15598 12 +     23417 GAA--GAG--AA-------------AC-GG
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19579 12 +     29694 GAA--GAG--AA-------------AC-GG
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44614 12 +     52772 GAA--GAG--AA-------------AC-GG
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19605 12 +     26198 GAA--GAG--AA-------------AC-GG
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3955940 12 +   4542175 GAA--GAG--AA-------------AC-GG
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19532 12 -     23490 GAA--GAG--AA-------------AC-GG
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           5032 14 -      7527 ccaaagag--aa-------------at-gg
i Platanista_gangetica.PlaMin_flattened_line_175331      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       22306 12 -     39866 GAA--GAG--AA-------------AC-GG
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        31464 12 +     34906 GAA--GAG--AA-------------AC-GG
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       35727 12 +     87950 GAA--GAG--AA-------------AC-GG
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     36526 12 +     88961 GAA--GAG--AA-------------AC-GG
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         22219 12 +     39403 GAA--GAG--AA-------------AC-GG
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          35995 12 -     87928 GAA--GAG--AA-------------AC-GG
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         42976 12 +     60166 GAA--GAG--AA-------------AC-GG
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43169 12 +     67232 TAA--GAG--AA-------------AC-GG
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38634 12 +     90634 GAA--GAG--AA-------------AC-GG
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          36017 12 -     89403 GAA--GAG--AA-------------AC-GG
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189181993 12 + 189387572 AAA--GAG--AA-------------AT-GG
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9596887 12 +   9816681 AAA--GAG--AA-------------AT-GG
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              18369 12 -     69807 AAA--GAG--AA-------------AT-GG
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              11731 12 +     80239 AAA--GAG--AA-------------AT-GC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_112514                11615 12 +     16234 AAA--GAG--TA-------------AT-GG
i Procavia_capensis.ProCapCap_scaffold_112514            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2617032 12 -   4620579 aaa--gag--aa-------------aa-gg
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1013088 12 +   2598838 aaa--gag--aa-------------aa-ag
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_114130                           9156 12 -     19127 aaa--gag--aa-------------aa-ag
i Propithecus_coronatus.k141_114130                      C 0 C 0
s Propithecus_diadema.k141_599139                            10250 12 +     10533 aaa--gag--aa-------------aa-ag
i Propithecus_diadema.k141_599139                        C 0 C 0
s Propithecus_edwardsi.k141_635656                             492 12 +     30655 aaa--gag--aa-------------aa-ag
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_217725                            2684 12 +     14082 aaa--gag--aa-------------aa-ag
i Propithecus_perrieri.k141_217725                       C 0 C 0
s Propithecus_tattersalli.k141_790011                        50369 12 -     67325 aaa--gag--aa-------------aa-ag
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7162 12 -     35169 aaa--gag--aa-------------aa-ag
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036367.1                            19355 12 -     31435 AAA--CAG--AA-------------AA-GA
i Psammomys_obesus.NESX01036367.1                        I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14220 12 +     25061 aaa--gag--ac-------------at-gt
i Pteronura_brasiliensis.PteBra_flattened_line_42152     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20306145 12 -  38429054 aaa--gag--at-------------gt-gT
i Puma_concolor.QAVW01001104.1                           I 256 C 0
s Pygathrix_cinerea.k141_1153803                             40439 12 -     91421 AAA--GAG--AA-------------AT-GG
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7634619 12 +   7812017 AAA--GAG--AA-------------AT-GG
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             40481 12 -     72585 AAA--GAG--AA-------------AT-GG
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31205 14 +     55207 CCAAAGAG--AA-------------AC-AA
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53606112 12 +  90668790 AAA--GAG--AA-------------AT-GG
i Rattus_norvegicus.chr16                                I 2 C 0
s Rhinopithecus_bieti.k119_188731                            15687 12 -     21983 AAA--GAG--AA-------------AT-GG
i Rhinopithecus_bieti.k119_188731                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91262056 12 - 195417433 AAA--GAG--AA-------------AT-GG
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7701147 12 +   7961872 AAA--GAG--AA-------------AT-GG
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1264 14 -      3450 CCAAAGAG--AA-------------AC-AG
i Saiga_tatarica.SaiTat_scaffold_455678                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119968442 12 - 121099817 AAA--GAG--AA-------------AT-GG
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40734 12 +     46362 AAA--GAG--AA-------------AT-GG
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               40794 12 +     45824 AAA--GAG--AA-------------AT-GG
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             57462 12 -     64574 AAA--GAG--AA-------------AT-GG
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                              20556 12 -     23631 AAA--GAG--AA-------------AT-GG
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 40720 12 -     61129 AAA--GAG--AA-------------AT-GG
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5443764 12 -   5703754 AAA--GAG--AA-------------AT-GG
i Sapajus_apella.ctg103                                  C 0 T 1846
s Sapajus_macrocephalus.k141_351809                          73003 12 -     80660 AAA--GAG--AA-------------AT-GG
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    177032 12 -    313613 taa--gag--aa-------------at-gg
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1705875                         5687 12 +     17286 AAA--GAG--AA-------------AT-GG
i Semnopithecus_entellus.k141_1705875                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                       5812 12 -     58920 AAA--GAG--AA-------------AT-GG
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                            5720 12 +     45317 AAA--GAG--AA-------------AT-GG
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_960425                             5833 12 +      9426 AAA--GAG--AA-------------AT-GG
i Semnopithecus_priam.k141_960425                        C 0 C 0
s Semnopithecus_schistaceus.k141_972136                       5726 12 +     24620 AAA--GAG--AA-------------AT-GG
i Semnopithecus_schistaceus.k141_972136                  C 0 C 0
s Semnopithecus_vetulus.k141_654052                           1656 12 -      5251 AAA--GAG--AA-------------AT-GG
i Semnopithecus_vetulus.k141_654052                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                     4440 11 -     77746 AAA---AG--AA-------------GT-GC
i Sigmodon_hispidus.SigHis_scaffold_20193                I 2 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126              23122 11 +   1910179 -AA--AAG--AA-------------AT-GG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 I 7
s Sorex_araneus.JH798187.1                                13682261 25 -  18376816 aaa--ata--aaaaccacacacacagt-gG
i Sorex_araneus.JH798187.1                               C 0 C 0
s Spermophilus_dauricus.KZ294078.1                         1976056 12 -   3870691 aaa--gag--aa-------------at-gg
i Spermophilus_dauricus.KZ294078.1                       C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             59005  6 +     97271 GAA--GAC----------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              48205 12 -    196729 AAA--GAG--AC-------------GT-AT
i Suricata_suricatta.SurSur_flattened_line_6629          I 232 C 0
s Sus_scrofa.CM000828.4                                   63023022 12 -  69701581 aaa--gag--aa-------------at-gg
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1105225 12 -   1523678 AAA--GAG--AA-------------AC-GG
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93778 12 +    116680 aaa--ggg--aa-------------at-gg
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138612 12 -    156842 aaa--gag--aa-------------ac-tg
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    407084 12 +    539355 aaa--gag--aa-------------ac-tg
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               50503 11 +     70052 -AA--GAG--AA-------------GT-GA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_722827                               14895 11 +     18080 -AA--GAG--AA-------------GT-GA
i Tarsius_wallacei.k141_722827                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186466200 12 + 186847797 AAA--GAG--AA-------------AT-GG
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_41106                    5728 12 +     27660 TAA--GAG--AA-------------AT-GG
i Tolypeutes_matacus.TolMat_scaffold_41106               C 0 C 0
s Trachypithecus_auratus.k141_95322                          12202 12 -     15799 AAA--GAG--AA-------------AT-GG
i Trachypithecus_auratus.k141_95322                      C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     25569 12 +     78344 AAA--GAG--AA-------------AT-GG
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_581431                       12373 12 -     15970 AAA--GAG--AA-------------AT-GG
i Trachypithecus_cristatus.k141_581431                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      11335 12 +     62838 AAA--GAG--AA-------------AT-GG
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_119873                            12300 12 -     17556 AAA--GAG--AA-------------AT-GG
i Trachypithecus_geei.k141_119873                        C 0 C 0
s Trachypithecus_germaini.k141_545543                        12314 12 -     15912 AAA--GAG--AA-------------AT-GG
i Trachypithecus_germaini.k141_545543                    C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      11264 12 +     64340 AAA--GAG--AA-------------AT-GG
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          12263 12 +     63452 AAA--GAG--AA-------------AT-GG
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_283481                   11338 12 +     21341 AAA--GAG--AA-------------AT-GG
i Trachypithecus_leucocephalus.k141_283481               C 0 C 0
s Trachypithecus_melamera.k141_261742                         1400 12 +     11697 AAA--GAG--AA-------------AT-GG
i Trachypithecus_melamera.k141_261742                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                        13181 12 +     33539 AAA--GAG--AA-------------AT-GG
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5965009 12 +   6242583 AAA--GAG--AA-------------AT-GG
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_583962                        13097 12 +     14028 AAA--GAG--AA-------------AT-GG
i Trachypithecus_pileatus.k141_583962                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                     4898 12 +    200418 cca--gag--aa-------------ga-gg
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            4313686  6 +  10818551 ----------GA-------------AT-GG
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15765574 14 +  33153633 ccaaagag--aa-------------ac-gg
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     869 12 +     21056 taa--gag--aa-------------at-gg
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                               4878323 12 -   5085361 gaa--gag--ac-------------at-gt
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  31722 12 +     50397 aaa--gag--aa-------------aa-gg
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1100575                              6811 12 +     25465 aaa--gag--aa-------------aa-gg
i Varecia_variegata.k141_1100575                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5390089 12 -   5488506 aaa--gag--aa-------------at-gg
i Vicugna_pacos.KN270157.1                               I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 42844 12 -     43706 aaa--gag--aa-------------at-gt
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                         24699 12 +    224448 AAA--GAG--AA-------------AT-GG
i Xerus_inauris.XerIna_scaffold_2302                     C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29910 10 +     86975 aca----g--ac-------------at-gt
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      38988  5 +     63895 AGA--GA-----------------------
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 2 I 4
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21721 14 -     22999 ccaaagag--aa-------------at-cg
i Ziphius_cavirostris.ZipCav_flattened_line_16896        C 0 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Desmodus_rotundus.KZ672289.1                             8650437  3 +  20541912 I
e Carollia_perspicillata.CarPer_scaffold_737331                421  3 -       918 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                 26946  3 +     43469 I
e Tonatia_saurophila.TonSau_scaffold_294                    103728  3 +    610378 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                31530  0 +     41958 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17424  0 +    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                        389332  0 -   3329780 C
e Pteropus_vampyrus.KN525825.1                             1390053  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              23005967  0 +  28871421 C
e Pteronotus_parnellii.KE854991.1                             1663  0 -     11709 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 162106  0 -    366855 C
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_39861                18895  3 -     30105 I
e Megaderma_lyra.MegLyr_scaffold_4542                        36015  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                 24123  0 +    270270 C
e Hipposideros_galeritus.HipGal_scaffold_65612                9129  0 -     20285 C
e Hipposideros_armiger.JXIK01000431.1                       132216  0 +   1711038 C
e Eidolon_helvum.KE797349.1                                  19343  0 -     31197 C
e Craseonycteris_thonglongyai.CraTho_scaffold_153350           127  2 +      5041 I
e Anoura_caudifer.AnoCau_scaffold_1412                      209496  3 +    412891 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11220 43 +     36723 CAAGACA-CGG-A-C-GATG-T----GAA-------A--GC--CAG---G--GG-CT--GTCCT----CCA-----------G--------ACC
s Acinonyx_jubatus.LLWD01001279.1                           836741 54 +   1699592 CAAGACA-CTG-A-AG-ATT-T----GTA-------G--GC--CAG---G--AG-CT--TATT--TCC--AGGGTTAGCGGTC--------ACG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     10762 42 -     63021 CATGAAT-ACA-A-A-GATC-T----GTA-------A--TC--CAG---G--AG-CCTCTTTG-------A-----------C--------ACC
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538445 38 -  29979442 caagaca-ctg-a-ag-gtt-t----gaa-------a--gc--cag---a--ag-CC--ATC--CTC---C-----------------------
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            107887 38 -    347723 caagaca-ctg-a-cg-gtt-t----gca-------g--gc--cag---g--ag-ac--atc---ctc--c-----------------------
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                     1451 42 +     61208 CATGATG-TCA-A-A-GATC-T----TTA-------A--TG--CAT---G--GC-TCTCCTCT-------A-----------C--------ACC
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   40784 42 -     52922 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          7106 42 +     11307 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Allochrocebus_lhoesti.k141_1932296                     C 0 C 0
s Allochrocebus_preussi.k141_499905                           7278 42 -     13300 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Allochrocebus_preussi.k141_499905                      C 0 C 0
s Allochrocebus_solatus.k141_139760                           9159 42 +     12926 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Allochrocebus_solatus.k141_139760                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             31823 43 +     51355 CAAGACA-TTG-A-A-GATG-T----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               24969 43 -     36483 CAAGACA-TTG-A-A-GATG-T----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              7074 43 -     13496 CAAGACA-TTG-A-A-GATG-T----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23856 43 +     27940 CAAGACA-TTG-A-A-GATG-T----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15664 43 -     39310 CAAGACA-TTG-A-A-GATG-T----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            23922 43 +     30492 CAAGACA-TTG-A-A-GATG-T----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28153 43 +     47717 CAAGACA-TTG-A-A-GATG-T----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_2029433                            79125 43 +     87306 CAAGACA-TTG-A-A-GATG-T----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------AGC
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             39107 43 +     50774 CAAGACA-TTG-A-A-GATG-T----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707841 43 -   2318259 TAAGAC-ATTG-A-AG-GTT-T----GTA-------A--GT--CAG---G--CG-CT--ACCC--TCC--A-----------T--------ATC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303             27071 42 -     32520 TAAGAC--TTG-A-AG-GTT-G----GTA-------A--GT--CAG---G--GG-CT--ACCC--TCC--A-----------T--------ATC
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_2596348                                   5375 22 +     12024 ---------------------------------------GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Aotus_azarae.k141_2596348                              I 20 C 0
s Aotus_griseimembra.k141_2227177                             5042 22 -     10972 ---------------------------------------GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Aotus_griseimembra.k141_2227177                        I 21 C 0
s Aotus_nancymaae.KZ198451.1                               4333503 22 -   5030052 ---------------------------------------GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Aotus_nancymaae.KZ198451.1                             I 21 C 0
s Aotus_trivirgatus.k141_1801223                              5435 22 -     12698 ---------------------------------------gc--cag---g--gg-CT--ATTCT----TCA-----------G--------ACC
i Aotus_trivirgatus.k141_1801223                         I 21 C 0
s Aotus_vociferans.k141_506037                                4895 22 -     11998 ---------------------------------------GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Aotus_vociferans.k141_506037                           I 21 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22265 43 +     39421 caagaca-ttg-a-a-gATC-T----GCA-------A--AC--TAT---A--GGCCCTCCTCC-------A-----------T--------GTC
i Aplodontia_rufa.AprRuf_scaffold_37633                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       14347 47 +     45910 CAAGATG-TTG-A-A-GATT-TATTTGTA-------A--GC--CAG---A--GG-CT--CTCCA----CCA-----------T--------ACC
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21232118 43 -  21539123 CAAGACA-TTG-A-A-GATG-T----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3190 43 -     48076 CAAGACA-TTG-A-A-GATG-T----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18656 43 -     22344 CAAGACA-TTG-A-A-GATG-T----ATA-------A--GG--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31712 43 -     89868 CAAGACA-TTG-A-A-GATG-T----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36125 43 -     40414 CAAGACA-TTG-A-A-GATG-T----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                43959 43 +     72325 caagaca-ttg-a-a-gatg-t----ata-------a--gc--cag---g--gg-CT--ATTCT----TCA-----------G--------ACC
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75718 42 -     92717 caagaca-ttg-a-a-ggtt-t----gta-------a--gc--t-g---c--gg-CT--ATCCT----CCA-----------C--------ACC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              76301 42 +     85213 caagaca-ttg-a-a-ggtt-t----gta-------a--gc--t-g---c--gg-CT--ATCCT----CCA-----------C--------ACC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222500 43 +  23207421 caagaca-ctg-a-ag-gtt-t----gtg-------a--gc--cgg---g--gG-CT--ACCG--TCC--A-----------T--------ATC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4503 43 +     25979 caagaca-ctg-a-ag-gtt-t----gtg-------a--gc--cgg---g--gG-CT--ACCG--TCC--A-----------T--------ATC
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     12899 43 -    124022 TAAGAC-ATTG-A-AG-GTT-T----GTA-------A--GT--CAG---G--GG-CT--ACCC--TCC--A-----------T--------ATC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                    233077 43 -    288883 TAAGAC-ATTG-A-AG-GTT-T----GTA-------A--GT--CAG---G--GG-CT--ACCC--TCC--A-----------T--------GTC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20306452 43 +  48749331 taagac-attg-a-ag-gtt-t----gta-------a--gt--cag---g--gg-CT--ACCC--TCC--A-----------T--------ATC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1159554 43 -   1948126 taagac-attg-a-ag-gtt-t----ata-------a--gt--cag---g--gg-CT--ACCC--TCC--A-----------T--------ATC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18116664 43 +  45695690 taagac-actg-a-ag-gtt-t----gta-------a--gt--cag---g--gg-CT--ACCC--TCC--A-----------T--------ATC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2852119 43 +   4408762 TAAGAC-ATTG-A-AG-GTT-T----GTA-------A--GT--CAG---G--GG-CT--ACCT--TCC--A-----------T--------ATT
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                116982 42 -    122966 CAAGACA-TTG-A-A-GATG-C----ACA-------A--GC--CAG---G--G--CT--ACTCT----TCA-----------G--------ACC
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76460 42 +     81800 CAAGACA-TTG-A-A-GATG-C----ACA-------A--GC--CAG---G--G--CT--ACTCT----TCG-----------G--------ACC
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45665 42 -     95584 CAAGACA-TTG-A-A-GATG-C----ACA-------A--GC--CAG---G--G--CT--ACTCT----TCA-----------G--------ACC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69760 42 -    119600 CAAGACA-TTG-A-A-GATG-C----ACA-------A--GC--CAG---G--G--CT--ACTCT----TCA-----------G--------ACC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020486 43 -  17673402 caagaca-ctg-a-ag-ttt-t----gta-------a--gc--caa---g--gG-CT--ACCC--TCC--A-----------T--------ATC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2353316 43 -   7040546 caagaca-ctg-a-ag-ttt-t----gta-------a--gc--caa---g--gG-CT--ACCC--TCC--A-----------T--------ATC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  421575 43 -   1652518 caagaca-ctg-a-ag-ttt-t----gta-------a--gc--caa---g--gG-CT--ACCC--TCC--A-----------T--------ATC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17831779 42 -  60362399 caagaca-ctg-a-ag-gtt-t----ata-------g--gc--cag---g--ag-CT--ATC--CTC---A-----------T--------ACC
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32523 42 -     43241 caagaca-ctg-a-ag-gtt-t----ata-------g--gc--cag---g--ag-CT--ATC--CTC---A-----------T--------ACC
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067247 42 -   9314153 caagaca-ctg-a-ag-gtt-t----ata-------g--gc--cag---g--ag-CT--ATC--CTC---A-----------T--------ACC
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17991906 42 -  59632846 caagaca-ctg-a-ag-gtt-t----ata-------g--gc--cag---g--ag-CT--ATC--CTC---A-----------T--------ACC
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18533012 42 +  63665305 caagaca-ctg-a-ag-gtt-t----ata-------g--gc--cag---g--ag-CT--ATC--CTC---A-----------T--------ACC
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18861904 43 +  46296322 TAAGAC-ATTG-A-AG-GTT-T----GTA-------A--GT--CAG---G--GG-CT--ACCC--TCC--A-----------T--------ATC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18092619 38 -  44709034 -----C-ATTG-A-AG-GTT-T----GTA-------A--GT--CAG---G--GG-CT--ACCC--TCC--A-----------T--------ATC
i Capra_hircus.CM004588.1                                C 0 C 0
s Carlito_syrichta.NW_007259797.1                           179937 42 -    496798 CCAGACA-CTG-A-A-GACT-T----GTA-------A--GT--CA----G--GG-CT--GTCCT----CCC-----------C--------ACC
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    167159 49 +    179628 TAAAACA-CTA-A-A-GATC-T----GTGATCCATAA--GC--AGG---G--AC-TCTCCTCC-------A-----------T--------ACC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                    113722 43 +    217609 CAAGACA-TTA-A-AG-GTT-T----GTA-------G--GG--CGG---A--GG-CT--ACCC--TCC--A-----------T--------ATC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cebus_albifrons.Contig27                                25675604 42 +  26074798 caagaca-tta-a-a-gATA-T----A-C-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------C--------ACC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               22072 42 +     28840 CAAGACA-TTA-A-A-GATA-T----A-C-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------C--------ACC
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7743 42 +     13997 CAAGACA-TTA-A-A-GATA-T----A-C-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------C--------ACC
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29861 42 +     31688 CCAGACA-CTG-A-A-GACT-T----GTA-------A--GT--CA----G--GG-CT--GTCCT----CCC-----------C--------ACC
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12257295 18 +  27778364 ---------------------------------------------G---G--GG-CT--ACCC--ACT--A-----------T--------ATC
i Ceratotherium_simum.JH767749.1                         I 8 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          3002 18 +     15641 ---------------------------------------------G---G--GG-CT--ACCC--ACT--A-----------T--------ATC
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     I 8 C 0
s Cercocebus_atys.KQ010504.1                               4501756 42 +   4669795 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_2766003                       23028 42 -     30935 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercocebus_chrysogaster.k141_2766003                   C 0 C 0
s Cercocebus_lunulatus.k141_245046                            7430 42 +     18174 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercocebus_lunulatus.k141_245046                       C 0 C 0
s Cercocebus_torquatus.k141_4063387                           7267 42 +     18249 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercocebus_torquatus.k141_4063387                      C 0 C 0
s Cercopithecus_ascanius.k141_4281816                         2388 42 -      5884 CAAGACG-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercopithecus_ascanius.k141_4281816                    C 0 C 0
s Cercopithecus_cephus.k141_1630443                           1412 42 +      4620 CAAGACG-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercopithecus_cephus.k141_1630443                      C 0 C 0
s Cercopithecus_diana.k141_488174                             7848 42 +     10982 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercopithecus_diana.k141_488174                        C 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1394 42 +      4810 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercopithecus_hamlyni.k141_1302205                     C 0 C 0
s Cercopithecus_lowei.k141_4082698                            7310 42 +     34178 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercopithecus_lowei.k141_4082698                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38849420 42 +  39242232 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21256213 42 -  21565898 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_557928                         7476 42 -     18401 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercopithecus_neglectus.k141_557928                    C 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7539 42 -     15013 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercopithecus_nictitans.k141_1200139                   C 0 C 0
s Cercopithecus_petaurista.k141_365908                        7510 42 +     11214 CAAGACG-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercopithecus_petaurista.k141_365908                   C 0 C 0
s Cercopithecus_pogonias.k141_391400                          2330 42 -     13831 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercopithecus_pogonias.k141_391400                     C 0 C 0
s Cercopithecus_roloway.k141_1248991                         27504 42 +     68532 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Cercopithecus_roloway.k141_1248991                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             558 28 -      1897 AAAGCCA-TCG-A-A-GGTT-T----GTA-------A--GCCAGGG------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       C 0 I 15
s Cheirogaleus_major.k141_333249                             43709 42 -     52598 caagaca-ttg-a-a-ggtt-t----gta-------a--gc--T-G---C--GG-CT--ATCCT----CCA-----------C--------AAC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           39040 42 +     57038 CAAGACA-TTG-A-A-GGTT-T----GTA-------A--GC--T-G---C--GG-CT--ATCCT----CCA-----------C--------AAC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Cheracebus_lucifer.k141_49986                               9880 42 -     17098 CGAGACA-TTG-A-A-GACG-C----ATA-------A--GC--CAG---G--G--CT--GTTCT----TCA-----------G--------ACC
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9750 42 +     17877 CGAGACA-TTG-A-A-GACA-C----ATA-------A--GC--CAG---G--G--CT--GTTCT----TCA-----------G--------ACC
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167317 42 -    216457 CGAGACA-TTG-A-A-GACG-C----ATA-------A--GC--CAG---G--G--CT--GTTCT----TCA-----------G--------ATC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71790 42 +     76511 CGAGACA-TTG-A-A-GACG-C----ATA-------A--GC--CAG---G--G--CT--GTTCT----TCA-----------G--------ATC
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chiropotes_israelita.k141_747660                          114007 42 +    146308 CAAGACA-TTG-A-A-GATG-C----ACA-------A--GC--CAG---G--G--CT--ACTCT----TCA-----------G--------ACC
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          45915 42 -     50570 CAAGACA-TTG-A-A-GATG-C----ACA-------A--GC--CAG---G--G--CT--ACTCT----TCA-----------G--------ACC
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455288 42 -  18827391 CAAGGCA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41231 42 -     50209 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448213 42 + 135778131 CAAGACG-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   787 43 -     25429 AAAGTCA-TGG-A-A-GGTT-T----GTA-------A--GC--CAG---G--GA-CT--ATCT--TCC--A-----------T--------ATC
i Choloepus_didactylus.ChoDid_scaffold_22546             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            195915 43 +    839153 aaagtca-tgg-a-a-ggtt-t----gta-------a--gc--cag---g--ga-TT--ATCT--CCC--A-----------T--------ACC
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               6760 40 -      9651 CAAGCCA-TTA-G-T-AGTT-T----ATA-------AAATC--AAT---G--GG-TT--TTCT--TC---C-----------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          C 0 I 188
s Colobus_angolensis.KN981557.1                            1936154 43 +   2368649 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199970132 43 + 200372422 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              58446 43 +     84244 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17566916 34 -  53390261 caaaACA-CTG-A-G--GTT-C----GGGA------G--GG--TAG---G--G--CC--ATCT-------------------------------
i Condylura_cristata.JH655891.1                          I 563 I 1
s Cricetomys_gambianus.CriGam_scaffold_14425                 16673 42 +     83289 CATGACA-CCA-A-A-GATC-T----GTA-------A--TC--CAA---G--TG-TCTCCTTG-------A-----------C--------ACC
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11697304 38 + 224834208 CATGACA-TCA-A-A-AATC-T----GTA-------A--A----AG---A--GG-T--CTCTG-------A-----------C--------ACC
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_522851                64 43 +      2245 catgaca-ctg-aaa--att-g----gTC-------T--GT--TGC---G--TG-CT--CTTC-CTC---A-----------T--------ACC
i Crocidura_indochinensis.CroInd_scaffold_522851         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59449 54 -     87169 GAAGCCA-CTG-A-AG-GTT-T----GTA-------G--GC--CAG---G--AG-CT--ATTT--TCC--AGGGTGAGCAGTT--------AGG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            92362 24 +   2246927 aaagccc-TGG-A-G-AGTT-T----GCA-------G--GC--C--------------------------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12562469 42 -  12879189 caggaca-ttg-a-a-gatc-t----gta-------a--gc--c-g---g--gg-CT--TTCCT----CCA-----------C--------ACC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16841651 43 +  35494412 caagaca-ctg-a-ag-gtt-t----gtg-------a--ga--cag---g--gg-CT--AACC--TCC--A-----------T--------ATC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  699090 18 +   1390856 ---------------------------------------------G---G--GT-CT--ACCC--ACT--A-----------T--------ATC
i Dicerorhinus_sumatrensis.PEKH010002091.1               I 8 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                   31893 18 +    198055 ---------------------------------------------g---g--gg-CT--ACCC--ACT--A-----------T--------ATC
i Diceros_bicornis.DicBicMic_scaffold_5955               I 8 C 0
s Dipodomys_ordii.KN672350.1                              18914691 41 +  37912305 caagata-ttg-a-a-gata-t----gtg-------a--ac--aga---g--TA-TCTCCG-T-------G-----------C--------GCC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_47531                  13289 41 -     26976 CAAGATA-TTG-A-A-GATA-T----GTG-------A--AC--AGA---G--TA-TCTCCG-T-------G-----------T--------GCC
i Dipodomys_stephensi.DipSte_scaffold_47531              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       342078 42 +    607251 TAAGAC--TTC-A-AG-GTT-T----GTA-------A--GT--CAG---G--GG-CT--ACCC--TCC--A-----------T--------ATC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          47704 42 -    110024 CATGACA-TCA-A-A-GATC-T----GTG-------A--GC--CAG---A--GG-TTTTTTTG-------A-----------C--------ACC
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01050844.1                            8955 42 +     12610 CATGACC-TCA-A-A-GATC-T----GTG-------A--GC--CAG---A--GG-TTTCTTTG-------A-----------C--------ACC
i Ellobius_talpinus.LOJH01050844.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16365785 38 -  41312741 caagaca-ccg-a-ag-gtt-t----GCA-------G--GC--CAG---A--AG-CC--ATC--CTC---C-----------------------
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1310390 42 +   4378816 caagaca-ttg-a-ag-gTG-T----GTA-------A--AC--CAG---T--GG-CT--AC-C--ACT--A-----------C--------ATC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18557859 42 -  39960074 caagaca-ttg-a-ag-gTG-T----GTA-------A--AC--CAG---T--GG-CT--AC-C--ACT--A-----------C--------ATC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               59900 42 +    498745 caagaca-ttg-a-ag-gTG-T----GTA-------A--AC--CAG---T--GG-CT--AC-C--ACT--A-----------C--------ATC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3365269  5 -   7059049 agaga-----------------------------------------------------------------------------------------
i Erinaceus_europaeus.JH835339.1                         C 0 I 211
s Erythrocebus_patas.Contig38                             21237494 42 -  21539334 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           40824 43 +    133382 caagaca-ctg-a-ag-gtt-t----gtg-------a--gc--cgg---g--gG-CT--ACCG--TCC--A-----------T--------ATC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5126 43 -     25849 caagaca-ctg-a-ag-gtt-t----gtg-------a--gc--cgg---g--gG-CT--ACCC--TCC--A-----------T--------ATC
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_1869827                             12826 44 -     21348 CAAGACA-TTG-A-A-GGTT-T-TT-GCA-------A--GC--T-G---C--GG-CT--ATTCT----CCC-----------T--------ACC
i Eulemur_albifrons.k141_1869827                         C 0 C 0
s Eulemur_collaris.k141_601111                               10028 42 +     70999 caagaca-ttg-a-a-ggtt-t----gca-------a--gc--T-G---C--GG-CT--ATTCT----CCC-----------T--------ACC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                               7767 42 -    112731 caagaca-ttg-a-a-ggtt-t----gca-------a--gc--t-g---c--gg-CT--ATTCT----CCC-----------T--------ACC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                              6777 42 -     68309 caagaca-ttg-a-a-ggtt-t----gca-------a--gc--t-g---c--gg-CT--ATTCT----CCC-----------T--------ACC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_2627385                                 3913 42 -      9374 caagaca-ttg-a-a-ggtt-t----gca-------a--gc--T-G---C--GG-CT--ATTCT----CCC-----------T--------ACC
i Eulemur_fulvus.k141_2627385                            C 0 C 0
s Eulemur_macaco.k141_1562045                                33008 42 +     75513 caagaca-ttg-a-a-ggtt-t----gca-------a--gc--t-g---c--gg-CT--ATTCT----CCC-----------T--------ACC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 30893 42 +     97555 CAAGACA-TTG-A-A-GGTT-T----GCA-------A--GC--T-G---C--GG-CT--ATTCT----CCC-----------T--------ACC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            7548 42 -     30972 caagaca-ttg-a-c-ggtt-t----gca-------a--gc--T-G---C--GG-CT--ATTCT----CCC-----------T--------ACC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_1120150                                  7425 42 +     16616 caagaca-ttg-a-a-ggtt-t----gca-------a--gc--T-G---C--GG-CT--ATTCT----CCC-----------T--------ACC
i Eulemur_rufus.k141_1120150                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              34010 44 +    111500 caagaca-ttg-a-a-ggtt-t--ttgCA-------A--GC--T-G---C--AG-CT--ATTCT----CCC-----------T--------ACC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20267882 54 + 206538554 CAAGACA-CTG-A-AG-ATC-T----GTA-------G--GC--CAG---G--AG-CT--TATT--TCC--AGGGTTAGCGGTC--------ACG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20226664 54 + 205367284 CAAGACA-CTG-A-AG-ATC-T----GTA-------G--GC--CAG---G--AG-CT--TATT--TCC--AGGGTTAGCGGTC--------ACG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  3690 54 -     25330 caagaca-CTG-A-AG-ATC-T----GTA-------G--GC--CAG---G--AG-CT--TATT--TCC--AGGGTTAGCGGTC--------ACG
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Galago_moholi.ctg3793                                        832 47 +    137831 CAAGACA-TTA-A-A-GATT-TATTTGTA-------A--GC--CAG---A--GG-CT--CTCCA----CCA-----------T--------AGC
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             1948 47 -     22493 CAAGACA-TTA-A-A-GATT-TATTTGTA-------A--GC--CAG---A--GG-CT--CTCCA----CCA-----------T--------AGC
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_1153324                           11838 46 +     12379 CAAGACA-TTA-A-A-GATT-TATTTGTA-------A--GC--CAG---A---G-TT--CTCTA----CCA-----------T--------AGC
i Galagoides_demidoff.k141_1153324                       C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_75343               15905 40 -     17176 caagaca-ttg-a-a-aatt-t----gta-------a--gc--cag---g--ga-CT--ATCC-------G-----------T--------ATC
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     636935 42 -    660261 TAAGAC--TTG-A-AG-GTT-T----GTA-------a--gt--cag---g--gg-ct--actc--tcc--a-----------t--------aCC
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_149316                            5252 40 +      8016 CAAGATG-TTG-A-A-GATC-T----ATA-------A--GG--CAG---G--GGCTC---TAC-------A-----------C--------ATC
i Glis_glis.GliGli_scaffold_149316                       C 0 C 0
s Gorilla_beringei.k141_179627                                 989 43 +      1068 CAAGACA-CGG-A-C-GATG-T----GAA-------A--GC--CAG---G--GG-CT--GTCCT----CCA-----------G--------ACC
i Gorilla_beringei.k141_179627                           C 0 C 0
s Gorilla_gorilla.CYUI03001204.1                             39838 43 -     63219 CAAGACA-CGG-A-C-GATG-T----GAA-------A--GC--CAG---G--GG-CT--GTCCT----CCA-----------G--------ACC
i Gorilla_gorilla.CYUI03001204.1                         I 49 I 208
s Graphiurus_murinus.GraMur_scaffold_10447                   55004 43 +     78134 CGAGATG-TTG-A-A-GATC-T----GTA-------A--GG--CAG---G--AGCTGTCCTCC-------A-----------C--------ATC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                           7422 42 +     40692 caagaca-ttg-a-a-ggtt-t----gca-------a--gc--T-G---C--GG-CT--ATTCT----CCC-----------T--------ACC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_435261                             17110 42 +     22537 caagaca-ttg-a-a-ggtt-t----gca-------a--gc--T-G---C--GG-CT--ATTCT----CCC-----------T--------ACC
i Hapalemur_gilberti.k141_435261                         C 0 C 0
s Hapalemur_griseus.k141_679418                              15757 42 -     28566 caagaca-ttg-a-a-ggtt-t----gca-------a--gc--T-G---C--GG-CT--ATTCT----CCC-----------T--------ACC
i Hapalemur_griseus.k141_679418                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         14489 42 +     42923 caagaca-ttg-a-a-ggtt-t----gca-------a--gc--T-G---C--GG-CT--ATTCT----CCC-----------T--------ACC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17744 42 +     53142 caagaca-ttg-a-a-ggtt-t----gca-------a--gc--T-G---C--GG-CT--ATTCT----CCC-----------T--------ACC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               273137 54 +    327341 AAAGACA-CTG-A-AG-GTT-T----GTA-------G--GC--CAG---G--AG-CT--ATTT--TCC--AGGGTGAGCAGTT--------AAG
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14624 43 -     48891 taagac-attg-a-ag-gtt-t----gta-------a--gt--cag---g--gg-CT--ACCC--TCC--A-----------T--------ATC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10310 35 -     15841 CACGCCA-CTG-G-C-ATTT-C----ATA-------A--GC--TAT---G--GG-CT--CTTC-------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_90013            C 0 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6521 43 +     36432 CAAGACA-TGG-A-AG-GTT-T----GTC-------A--GT--TGA---G--GG-CT--ACCC--TCC--A-----------T--------ACC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hoolock_leuconedys.ctg274                                    460519 43 +    630532 CAAGACA-TGG-A-C-TATG-T----AAA-------A--GC--CAG---G--GG-CT--GTCCT----CCA-----------G--------ACC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   9010 54 -     22022 CAAGACA-CTG-A-AG-GTT-T----TTA-------A--GC--CAG---G--AG-CT--ATTT--CCC--AGGGTTAGTGGTT--------AGG
i Hyaena_hyaena.HyaHya_flattened_line_62789              C 0 C 0
s Hylobates_agilis.k141_967383                                1788 43 -      4846 CAAGACA-CGG-A-C-GACG-T----AAA-------A--GC--CAG---G--GG-CT--GTCCT----CCA-----------G--------ACC
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                246 43 -      8919 CAAGACA-TGG-A-C-GGCG-T----AAA-------A--GC--CAG---G--GG-CT--GTCCT----CCA-----------G--------ACC
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555217 43 - 191637585 CAAGACA-TGG-A-C-GACG-T----AAA-------A--GC--CAG---G--GG-CT--GTCCT----CCA-----------G--------ACC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3348104 43 -  11177569 CAAGACA-TGG-A-C-GACG-T----AAA-------A--GC--CAG---G--GG-CT--GTCCT----CCA-----------G--------ACC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543819 41 -   7955117 aaagaca-ttt-a-a-gATC-T----GTA-------A--AC--CATGATG--GTCTGTTCTCC-------------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 4
s Indri_indri.k141_1997670                                    2249 42 +      8453 caagaca-ttg-a-a-gatt-t----ATA-------A--AT--T-G---T--GG-CT--ATCCT----CCA-----------C--------ACC
i Indri_indri.k141_1997670                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29243 43 -     31341 caagaca-ctg-a-ag-gtt-t----gtg-------a--gc--cag---g--gg-CT--ACCC--TCC--A-----------T--------ATC
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8298726 24 -   9596543 ---------------------------TA-------A--TG--CAC---A--GC-TCTCCTCT-------A-----------T--------ACC
i Jaculus_jaculus.JH725527.1                             I 10 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                  4994 43 +     97402 caagaca-ctg-a-ag-att-t----gtg-------a--gc--cag---g--gg-CT--ACCC--TCC--A-----------T--------ATC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         33189 43 -     38430 CAAGACA-TTG-A-A-GATG-T----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544410 42 -  30322482 caagaca-ttg-a-a-ggtt-t----GCA-------G--GC--T-G---C--GG-CT--ATTCT----CCC-----------T--------ACC
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_2922                            8794 42 -     24677 caagaca-ttg-a-a-gatt-t----gca-------a--gc--T-G---C--AG-CT--ATCCT----CCA-----------T--------ACC
i Lepilemur_ankaranensis.k141_2922                       C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4763 42 -     31569 caagaca-ttg-a-a-gatt-t----gca-------a--gc--T-G---C--AG-CT--ATCCT----CCA-----------T--------ACC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                         22825 42 +     25010 caagaca-ttg-a-a-gatt-t----gca-------a--gc--T-G---C--AG-CT--ATCCT----CCA-----------T--------ACC
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      48379 42 +     54090 caagaca-ttg-a-a-gatt-t----gca-------a--gc--T-G---C--AG-CT--ATCCT----CCA-----------T--------ACC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3074506 38 +   3914936 caagaca-ctg-a-ag-gtt-t----gca-------a--gc--cag---g--ag-CT--ATC--CTC---C-----------------------
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_57262                     12941 31 -     23961 aaagaca-ttg-a-a-CACT-T----GCA-------G--AC--CAA---G--TG-CT-------------------------------------
i Lepus_americanus.LepAme_scaffold_57262                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             299160 43 -    662738 caggaca-ctg-a-ag-gtt-t----gtg-------a--gc--aag---g--gG-CT--ACCC--TCC--A-----------T--------ATC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1464748 42 +   1826925 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2958567                            3840 47 -     22734 CAAGATG-TTG-A-A-GATT-TATTTGTA-------A--GC--CAA---A--GG-GT--CTCCA----TCA-----------T--------ACC
i Loris_lydekkerianus.k141_2958567                       C 0 C 0
s Loris_tardigradus.ctg83                                  1061268 47 +   6120653 CAAGATG-TTG-A-A-GATT-TATTTGTA-------A--GC--CAA---A--GG-GT--CTCCA----TCA-----------T--------ACC
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17988146 42 -  59628241 caagaca-ctg-a-ag-gtt-t----ata-------g--gc--cag---g--ag-CT--ATC--CTC---A-----------T--------ACC
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              33006 43 +     40492 CAAGACA-TGG-A-A-GAT-GT----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59702931 43 +  60120075 CAAGACA-TGG-A-A-GAT-GT----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_794849                                 7125 43 +      8714 CAAGACA-TGG-A-A-GAT-GT----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Macaca_cyclopis.k119_794849                            C 0 C 0
s Macaca_fascicularis.k141_814140                           107559 43 -    114318 CAAGACA-TGG-A-A-GAT-GT----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_943731                                  7370 43 +     13165 CAAGACA-TGG-A-A-GAT-GT----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Macaca_fuscata.k119_943731                             C 0 C 0
s Macaca_leonina.k141_2438370                                12743 43 -     14632 CAAGACA-TGG-A-A-GAT-GT----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Macaca_leonina.k141_2438370                            C 0 C 0
s Macaca_maura.k141_515834                                   12901 43 +     14712 CAAGACA-TGG-A-A-GAT-GT----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Macaca_maura.k141_515834                               C 0 C 0
s Macaca_mulatta.NC_041758.1                             186866940 43 + 187317192 CAAGACA-TGG-A-A-GAT-GT----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25492055 43 -  25927173 CAAGACA-TGG-A-A-GAT-GT----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_128247                                   20371 43 +     98240 CAAGACA-TGG-A-A-GAT-GT----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Macaca_nigra.k141_128247                               C 0 C 0
s Macaca_radiata.k141_3254723                                 5913 43 +     10028 CAAGACA-TGG-A-A-GAT-GT----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Macaca_radiata.k141_3254723                            C 0 C 0
s Macaca_siberu.k141_1929020                                  7165 43 -      9047 CAAGACA-TGG-A-A-GAT-GT----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Macaca_siberu.k141_1929020                             C 0 C 0
s Macaca_silenus.Contig273                                  358174 43 -    668171 CAAGACA-TGG-A-A-GAT-GT----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_596453                                 1546 43 -      5469 CAAGACA-TGG-A-A-GAT-GT----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Macaca_thibetana.k99_596453                            C 0 C 0
s Macaca_tonkeana.k141_683787                                 7384 43 +      9199 CAAGACA-TGG-A-A-GAT-GT----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Macaca_tonkeana.k141_683787                            C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961824 42 -  24302211 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               377577 42 +    752769 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              40237 43 +    737560 caaaaca-ctg-a-tg-gTC-T----GTC-------C--GC--CAG---G--GG-CT--ATCC--TCC--A-----------T--------ATC
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              72408 26 -    317179 caagaca-ctg-a-tg-gtc-t----gtc-------a--gc--CAG------------------------------------------------
i Manis_pentadactyla.KN006162.1                          C 0 I 16
s Marmota_marmota.CZRN01000018.1                          33124886 38 -  40650429 agagaca-ttt-a-a-gatc-t----gta-------a--gc--CAT---G--GTCTGTTCTCC-------------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 4
s Mellivora_capensis.MelCap_flattened_line_19308             23324 38 +     74585 caagaca-ccg-g-ag-gtt-t----gca-------g--gc--cag---a--ag-CT--ATC--CTC---C-----------------------
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 66117 18 +    140813 --------------------------------------------AG---G--GG-TCTCTTTG-------A-----------C--------ACC
i Meriones_unguiculatus.MerUng_scaffold_7390             I 16 C 0
s Mesocricetus_auratus.KB708134.1                         12212405 41 -  29670104 CATGACT-TCA-A-AAAATC-T----GTA-------A--T----TG---AAGGA-T--CTCTG-------A-----------C--------ACC
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_74495                     4969 43 -     19186 caagaca-ctg-a-ag-gtt-t----gtg-------a--gc--cag---g--gg-CT--ACCC--TCC--A-----------T--------ATC
i Mesoplodon_bidens.MesBid_scaffold_74495                C 0 C 0
s Microcebus_murinus.CM007674.1                           18313380 42 -  93316391 CAAGACG-TTG-A-A-GGTT-T----GTA-------A--GC--T-G---C--AG-CT--GTCCT----CCA-----------C--------ACC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Miopithecus_ogouensis.k141_791330                           1697 42 -     13566 CAAGACA-TGG-G-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Miopithecus_ogouensis.k141_791330                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        24945 38 +     26817 CAAGACA-CTG-A-AG-GTT-T----GCA-------A--GC--CAG---G--AG-CT--ATC--CTC---C-----------------------
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    56897 43 -    437263 caagaca-ctg-a-ag-gtt-t----gtg-------a--ga--cag---g--gg-CT--AACC--TCC--A-----------T--------ATC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32077 42 +     82753 gaagac--ttg-a-ag-gtt-t----gta-------a--gt--cag---g--gg-CT--ACCC--TCC--A-----------T--------ATC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21717 54 +     63510 AAAGACA-CTG-A-AG-GTT-T----GTA-------G--CC--CAG---G--AG-CT--ATTT--TCC--AAGGTGAGCAGTT--------ACG
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mus_pahari.LT608297.1                                   31390874 42 -  89631738 CATGAAT-CCC-A-A-GATC-T----GTA-------G--TC--CAG---G--AA-TTGCTTTA-------A-----------C--------ACC
i Mus_pahari.LT608297.1                                  C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_74954             15556 43 -     17106 CAAAATG-TTA-A-A-GATT-T----GTA-------A--GG--CAG---G--GGCTCTCCTCC-------A-----------C--------ATC
i Muscardinus_avellanarius.MusAve_scaffold_74954         C 0 C 0
s Mustela_putorius.JH418006.1                               330537 38 -  14710649 caagaca-ctg-a-ag-gtt-t----GCA-------G--GC--CAG---A--AG-CC--ATC--CTC---C-----------------------
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14275 43 -     28317 aaagcca-ttg-a-a-ggtt-t----gta-------a--gc--CAG---G--GT-TT--ATCT--CCC--A-----------T--------ACC
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 C 0
s Nasalis_larvatus.k141_970469                               18556 43 +     37058 CAAGACG-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Nasalis_larvatus.k141_970469                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343498 38 +  31847680 caagaca-ctg-a-ag-gtt-t----gca-------a--gc--cag---g--ag-CT--ATC--CTC---C-----------------------
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5894949 43 +   7148211 caagaca-ctg-a-ag-gtt-t----gtg-------a--ga--cag---g--gg-CT--ACCC--TCC--A-----------T--------ATC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9182036 42 -   9404916 caagaca-ctg-a-ag-att-t----gta-------g--gc--cag---g--ag-CT--ATC--CTC---A-----------T--------ACC
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102653382 47 - 196305487 CAAGATG-TTG-A-A-GATT-TATTTGTA-------A--GC--CAG---A--GG-CT--CTCCA----TCA-----------T--------ACC
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_921975                              9524 47 +     15238 CAAGATG-TTG-A-A-GATT-TATTTGTA-------A--GC--CAG---A--GG-CT--CTCCA----TCA-----------T--------ACC
i Nycticebus_coucang.k141_921975                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827871 47 + 199412804 CAAGATG-TTG-A-A-GATT-TATTTGTA-------A--GC--CAG---A--GG-CT--CTCCA----TCA-----------T--------ACC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Odobenus_rosmarus.KB229312.1                              534046 38 -   2017862 caagaca-ctg-a-ag-gtt-t----gca-------a--gc--cag---g--ag-CT--ATC--CTC---C-----------------------
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         168747 42 +    630418 TAAGAC--TTC-A-AG-GTT-T----GCA-------A--GT--CAG---G--TG-CT--ACCC--TCC--A-----------T--------ATC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107628 42 -    150152 TAAGAC--TTG-A-AG-GTT-T----GTA-------a--gt--cag---g--gg-ct--actc--tcc--a-----------t--------aTC
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25255 42 +    140218 CATGACA-TCA-A-A-GATC-T----GTG-------A--TC--CAG---A--GG-TTTCTTTG-------A-----------C--------ACC
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                   12412 42 +     41509 CATAACA-TCA-A-A-GATC-T----GTA-------A--TC--CAG---A--GG-TTTCTTTG-------A-----------C--------ACC
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  2812175 43 -  10937097 caagaca-ctg-a-ag-gtt-t----gtg-------a--gc--cag---g--gg-CT--ACCC--TCC--A-----------T--------ATC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1807 42 -      4812 caagtta-tta-a-a-ggtt-t----gta-------a--gc--CAT---G--TG-CT--CTCT--TC---A-----------T--------ATT
i Orycteropus_afer.OryAfe_flattened_line_327065          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190544 31 + 174332312 gaagaca-ttg-a-a-CACT-T----GTA-------G--AC--CAA---G--TG-CT-------------------------------------
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       495103 50 -    559221 caagaca-ctg-a-ag-gtt-t----ata-------g--gc--cag---g--ag-ct--ata---cca--a-----------tagacttaAACC
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_187572                         4487 47 -      5557 CAAGACA-TTA-A-A-GATT-TATTTGTA-------A--GC--CAG---A--GG-CT--CTCCA----CCA-----------T--------ACC
i Otolemur_crassicaudatus.k141_187572                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             738140 47 -   1103335 CAAGACA-TTA-A-A-GATT-TATTTGTA-------A--GC--CAG---A--GG-CT--CTCCA----CCA-----------T--------ACC
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17617557 43 +  44047080 TAAGAC-ATTG-A-AG-GTT-T----GTA-------A--GT--CAG---G--GG-CT--ACCC--TCC--A-----------T--------ATC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1558 43 -     13921 TAAGAC-ATTG-A-AG-GTT-T----ATA-------A--GT--CAG---G--GG-CT--ACCC--TCC--A-----------T--------ATC
i Ovis_canadensis.OviCan_scaffold_75879                  C 0 C 0
s Pan_paniscus.KQ411608.1                                     3410 43 +     15831 CAAGACA-TGG-A-C-AATG-T----GAA-------A--GC--CAG---G--GG-CT--GTCCT----CCA-----------G--------ACC
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649224 43 + 189151597 CAAGACA-CGG-A-C-GATG-T----GAA-------A--GC--CAG---G--GG-CT--GTCCT----CCA-----------G--------ACC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  181556 54 +    230217 CAAGACA-CTG-A-AG-ATT-T----GTA-------G--GT--CAG---G--AG-CT--TATT--TCC--AGGGTTAGCGGTC--------ATG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                296345 54 +  18783137 CAAGACA-CTG-A-AG-ATT-T----GTA-------G--GT--CAG---G--AG-CT--TATT--TCC--AGGGTTAGCGGTC--------ATG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4751702 54 -   8748460 CAAGACA-CTG-A-AG-ATT-T----GTA-------G--GT--CAG---G--AG-CT--TATT--TCC--AGGGTTAGCGGTC--------ATG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1296475 43 -   2937107 taagac-cttg-a-ag-gtt-t----gta-------a--gt--cag---g--gg-CT--ACCC--TCC--A-----------T--------ATC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183469997 42 + 183742232 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_703094                              6335 42 -     17637 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Papio_cynocephalus.k141_703094                         C 0 C 0
s Papio_hamadryas.Contig39                                20592494 42 +  20919399 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  31759 42 +     41871 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_2087334                                    7342 42 -     13745 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Papio_papio.k141_2087334                               C 0 C 0
s Papio_ursinus.k141_4818248                                 14842 42 +     25215 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Papio_ursinus.k141_4818248                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42473 54 -     78924 CAAGACA-CTG-A-AA-GTT-G----GTA-------G--GC--CAG---G--AG-AT--CTTT--TCC--AAAGTTAGCAGTT--------AGG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1387561                          11770 47 +     15382 CAAGACG-TTG-A-A-GATT-TATTTGTA-------A--GC--CAG---A--GG-CT--CTCCA----CCA-----------T--------ACC
i Perodicticus_ibeanus.k141_1387561                      C 0 C 0
s Perodicticus_potto.k141_842195                             18320 47 -     21729 CAAGACG-TTG-A-A-GATT-TATTTGTA-------A--GC--CAG---A--GG-CT--CTCCA----CCA-----------T--------ACC
i Perodicticus_potto.k141_842195                         C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13563 42 +     28765 CAAGATA-TGA-A-A-GATC-T----GTG-------A--GT--AGA---G--GG-TCTCTTCT-------A-----------T--------ACC
i Perognathus_longimembris.PerPac_flattened_line_39705   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18245168 42 -  18517816 CATAACA-TCA-A-A-GATC-T----GTA-------A--TC--CAG---A--GG-TTTCTTTG-------A-----------C--------ACC
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              38878 43 +     63832 caagaca-ctg-a-ag-gtt-t----gtg-------a--ga--cag---g--gg-CT--ACCC--TCC--A-----------T--------ATC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                           28796 43 -     55023 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64214 43 +     89929 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14305 43 -     40849 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326782 43 -  14605196 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                             19597 42 +     26961 CAAGACA-TTG-A-A-GATG-C----ATA-------A--GC--CAG---G--G--CT--ATTCT----TCA-----------G--------ACC
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15610 42 +     23417 CAAGACA-TTG-A-A-GATG-C----ATA-------A--GC--CAG---G--G--CT--ATTCT----TCA-----------G--------ACC
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19591 42 +     29694 CAAGACA-TTG-A-A-GATG-C----ATA-------A--GC--CAG---G--G--CT--ATTCT----TCA-----------G--------ACC
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44626 42 +     52772 CAAGACA-TTG-A-A-GATG-C----ATA-------A--GC--CAG---G--G--CT--ATTCT----TCA-----------G--------ACC
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19617 42 +     26198 CAAGACA-TTG-A-A-GATG-C----ATA-------A--GC--CAG---G--G--CT--ATTCT----TCA-----------G--------ACC
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3955952 42 +   4542175 CAAGACA-TTG-A-A-GATG-C----ATA-------A--GC--CAG---G--G--CT--ATTCT----TCA-----------G--------ACC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19544 42 -     23490 CAAGACA-TTG-A-A-GATG-C----ATA-------A--GC--CAG---G--G--CT--ATTCT----TCA-----------G--------ACC
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           5046 43 -      7527 caagaca-ctg-a-ag-gtt-t----gtg-------a--gc--cag---g--gg-CT--ACCC--TCC--A-----------T--------ATC
i Platanista_gangetica.PlaMin_flattened_line_175331      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       22318 41 -     39866 C-AGACA-CTG-A-A-GACA-C----ATA-------A--GC--CAG---G--G--CT--GTTCT----TCA-----------G--------ACC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        31476 41 +     34906 C-AGACA-CTG-A-A-GACA-C----ATA-------A--GC--CAG---G--G--CT--GTTCT----TCA-----------G--------ACC
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       35739 41 +     87950 C-AGACA-CTG-A-A-GACA-C----ATA-------A--GC--CAG---G--G--CT--GTTCT----TCA-----------G--------ACC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     36538 41 +     88961 C-AGACA-CTG-A-A-GACA-C----ATA-------A--GC--CAG---G--G--CT--GTTCT----TCA-----------G--------ACC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         22231 41 +     39403 C-AGACA-CTG-A-A-GACA-C----ATA-------A--GC--CAG---G--G--CT--GTTCT----TCA-----------G--------ACC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          36007 41 -     87928 C-AGACA-CTG-A-A-GACA-C----ATA-------A--GC--CAG---G--G--CT--GTTCT----TCA-----------G--------ACC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         42988 41 +     60166 C-AGACA-CTG-A-A-GACA-C----ATA-------A--GC--CAG---G--G--CT--GTTCT----TCA-----------G--------ACC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43181 41 +     67232 C-AGACA-CTG-A-A-GACA-C----ATA-------A--GC--CAG---G--G--CT--GTTCT----TCA-----------G--------ACC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38646 41 +     90634 C-AGACA-CTG-A-A-GACA-C----ATA-------A--GC--CAG---G--G--CT--GTTCT----TCA-----------G--------ACC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          36029 41 -     89403 C-AGACA-CTG-A-A-GACA-C----ATA-------A--GC--CAG---G--G--CT--GTTCT----TCA-----------G--------ACC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189182005 43 + 189387572 CAAGATA-CGG-A-T-GATG-T----GAA-------A--GC--CAG---G--GG-CT--GTCCT----CCA-----------G--------ACC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9596899 43 +   9816681 CAAGATA-CGG-A-T-GATG-T----GAA-------A--GC--CAG---G--GG-CT--GTCCT----CCA-----------G--------ACC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              18381 43 -     69807 CAAGACA-TGG-A-A-GACG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              11743 43 +     80239 CAAGACA-TGG-A-A-GACG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_112514                11627 35 +     16234 CACGCCA-CTG-G-C-ATTT-C----ATA-------A--GC--CAT---G--GG-CT--CTCC-------------------------------
i Procavia_capensis.ProCapCap_scaffold_112514            C 0 I 3
s Prolemur_simus.MPIZ01000396.1                            2617044 42 -   4620579 caagacA-TTG-A-A-GGTT-T----GCA-------A--GC--T-G---C--GG-CT--ATTCT----CCC-----------T--------ACC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1013100 42 +   2598838 caagaca-tTG-A-A-GGTT-T----GTA-------A--GC--T-G---C--GG-CT--ATCCT----CCA-----------C--------ACC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_114130                           9168 42 -     19127 caagaca-ttg-a-a-ggtt-t----gta-------a--gc--T-G---C--GG-CT--ATCCT----CCA-----------C--------ACC
i Propithecus_coronatus.k141_114130                      C 0 C 0
s Propithecus_diadema.k141_599139                            10262 42 +     10533 caagaca-ttg-a-a-ggtt-t----gta-------a--gc--T-G---C--GG-CT--ATCCT----CCA-----------C--------ACC
i Propithecus_diadema.k141_599139                        C 0 C 0
s Propithecus_edwardsi.k141_635656                             504 42 +     30655 caagaca-ttg-a-a-ggtt-t----gta-------a--gc--T-G---C--GG-CT--ATCCT----CCA-----------C--------ACC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_217725                            2696 42 +     14082 caagaca-ttg-a-a-ggtt-t----gta-------a--gc--T-G---C--GG-CT--ATCCT----CCA-----------C--------ACC
i Propithecus_perrieri.k141_217725                       C 0 C 0
s Propithecus_tattersalli.k141_790011                        50381 42 -     67325 caagaca-ttg-a-a-ggtt-t----gta-------a--gc--T-G---C--GG-CT--ATCCT----CCA-----------C--------ACC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7174 42 -     35169 caagaca-ttg-a-a-ggtt-t----gta-------a--gc--T-G---C--GG-CT--ATCCT----CCA-----------C--------ACC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036367.1                            19367 41 -     31435 CATGGAT-ACA-A-A-GATC-T----GTA-------A--TC---AG---G--GG-TCTCTTTG-------A-----------C--------ACC
i Psammomys_obesus.NESX01036367.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14232 38 +     25061 caagaca-ccg-a-ag-gtt-t----GCA-------G--GC--CAG---A--AG-CC--ATC--CTC---C-----------------------
i Pteronura_brasiliensis.PteBra_flattened_line_42152     C 0 C 0
s Puma_concolor.QAVW01001104.1                            20306157 54 -  38429054 CAAAACA-CTG-A-AG-ATT-T----GTA-------G--GC--CAG---G--AG-CT--TATT--TCC--AGGGTTAGCGGTC--------ACG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             40451 43 -     91421 CAAGACA-TGG-A-A-GGTG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7634631 43 +   7812017 CAAGACA-TGG-A-A-GGTG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             40493 43 -     72585 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31219 42 +     55207 TAAGAC--TTC-A-AG-GTT-T----GTA-------A--GT--CAG---G--GG-CT--ACCC--TCC--A-----------T--------ATC
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53606124 42 +  90668790 CATGAAT-CCA-A-A-GATC-T----GTA-------A--TC--TAG---G--AA-TTTCTTTA-------A-----------T--------AGC
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinopithecus_bieti.k119_188731                            15699 43 -     21983 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Rhinopithecus_bieti.k119_188731                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91262068 43 - 195417433 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7701159 43 +   7961872 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1278 43 -      3450 TAAGAC-ATTG-A-AG-GTT-T----GTA-------A--GT--CAG---G--GG-CT--ACCC--TCC--A-----------T--------ATC
i Saiga_tatarica.SaiTat_scaffold_455678                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119968454 42 - 121099817 CAAGACA-TT--A-A-GATG-A----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40746 43 +     46362 CAAGACA-TT-GA-A-GATG-A----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               40806 43 +     45824 CAAGACA-TT-GA-A-GATG-A----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             57474 43 -     64574 CAAGACA-TT-GA-A-GATG-A----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                              20568 42 -     23631 CAAGACA-TT--A-A-GATG-A----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 40732 43 -     61129 CAAGACA-TT-GA-A-GATG-A----ATA-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5441930 43 -   5703754 CAAGACA-TTG-A-A-GATG-T----ATC-------A--GC--CAG---G--GG-CT--ATTCT----TCA-----------G--------ACC
i Sapajus_apella.ctg103                                  T 1846 I 9
s Sapajus_macrocephalus.k141_351809                          73015 36 -     80660 CAAGACA-TTG-A-A-GATG-T----ATC-------A--GC--CAG---G--GG-CT--ATTCT------------------------------
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    177044 34 -    313613 caagaca-ctg-a-a--ggT-C----TGCA------A--GT--GAG---G--G--CT--GTCT-------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 1
s Semnopithecus_entellus.k141_1705875                         5699 43 +     17286 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Semnopithecus_entellus.k141_1705875                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                       5824 43 -     58920 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                            5732 43 +     45317 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACA
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_960425                             5845 43 +      9426 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Semnopithecus_priam.k141_960425                        C 0 C 0
s Semnopithecus_schistaceus.k141_972136                       5738 43 +     24620 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Semnopithecus_schistaceus.k141_972136                  C 0 C 0
s Semnopithecus_vetulus.k141_654052                           1668 43 -      5251 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Semnopithecus_vetulus.k141_654052                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                     4451 42 -     77746 CATGACA-TCA-A-A-GATC-T----GTA-------A--TC--CAG---T--GG-TTTCTTTG-------A-----------C--------ACC
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126              23140 31 +   1910179 --------------A--GTT-G----GTG-------A--GT--CAA---G--GG-CT--AGCC--ACC--A-----------C--------GTC
i Solenodon_paradoxus.SolPar_flattened_line_126          I 7 C 0
s Sorex_araneus.JH798187.1                                13682286 25 -  18376816 CACAACA-CTG-AAA--GTT-T----GCC-------A--GT--TG-------------------------------------------------
i Sorex_araneus.JH798187.1                               C 0 I 11
s Spermophilus_dauricus.KZ294078.1                         1976068 41 -   3870691 aaagaca-ttt-a-a-gatc-t----gta-------a--gc--CATGATG--GTCTGTTCTCC-------------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_13525             59011 34 +     97271 ----ACA-CTG-A-AG-GTT-T----GCA-------G--GC--CAG---G--AG-CC--ATC--CTC---C-----------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              48217 54 -    196729 AAAGACA-CTG-A-AG-GTT-T----GTA-------G--GC--CAG---G--AG-CT--ATTT--TCC--AGGGTGAGCAGAT--------AGG
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   63023034 43 -  69701581 caagaca-tta-a-ag-gtt-t----gta-------g--gc--cag---a--gg-ct--accc--TCT--A-----------T--------ATC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1105237 43 -   1523678 CAAGACA-CGG-A-T-GATG-T----AAA-------A--GC--CAG---G--GG-CT--GTCCT----CCA-----------G--------ACC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93790 43 +    116680 aaagcca-ttg-a-a-ggtt-t----gta-------a--gc--CAG---G--GT-TT--ATCT--CCC--A-----------C--------ACC
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138624 43 -    156842 caagaca-gtg-a-ag-gtt-t----gta-------a--gc--caa---g--gg-cg--acCC--ACT--A-----------T--------ATC
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    407096 43 +    539355 caagaca-gtg-a-ag-gtt-t----gta-------a--gc--caa---g--gg-cg--acCC--ACT--A-----------T--------ATC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               50514 42 +     70052 CCAGACA-CTG-A-A-GACT-T----GTA-------A--GT--CA----G--GG-CT--GTCCT----CCC-----------C--------ACC
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_722827                               14906 42 +     18080 CCAGACA-CTG-A-A-GACT-T----GTA-------A--GT--CA----G--GG-CT--GTCCT----CCC-----------C--------ACC
i Tarsius_wallacei.k141_722827                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186466212 42 + 186847797 CAAGACA-TGG-A-A-GAT--T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_41106                    5740 21 +     27660 GAAGCCA-TCG-A-A-GGTT-T----GGA-------A---------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_41106               C 0 I 18
s Trachypithecus_auratus.k141_95322                          12214 43 -     15799 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Trachypithecus_auratus.k141_95322                      C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     25581 43 +     78344 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_581431                       12385 43 -     15970 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Trachypithecus_cristatus.k141_581431                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      11347 43 +     62838 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_119873                            12312 43 -     17556 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Trachypithecus_geei.k141_119873                        C 0 C 0
s Trachypithecus_germaini.k141_545543                        12326 43 -     15912 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Trachypithecus_germaini.k141_545543                    C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      11276 43 +     64340 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          12275 43 +     63452 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_283481                   11350 43 +     21341 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Trachypithecus_leucocephalus.k141_283481               C 0 C 0
s Trachypithecus_melamera.k141_261742                         1412 43 +     11697 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Trachypithecus_melamera.k141_261742                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                        13193 43 +     33539 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5965021 43 +   6242583 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_583962                        13109 43 +     14028 CAAGACA-TGG-A-A-GATG-T----AAA-------A--GC--CAG---G--AT-CT--GTCCT----CCA-----------G--------ACC
i Trachypithecus_pileatus.k141_583962                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                     4910 43 +    200418 taagacc-ttg-g-ag-att-t----gta-------a--gc--cag---g--gg-tt--acaC--TCC--C-----------T--------ATC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            4313692 43 +  10818551 CAAGTCA-TTG-G-C-AGTG-T----GTA-------A--GC--CCT---G--GG-GT--CTCT--TTT--G-----------T--------ATT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15765588 43 +  33153633 caagaca-ctg-a-ag-gtt-t----gtg-------a--gc--cag---g--gg-CT--ACCC--TCC--A-----------T--------ATC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     881 34 +     21056 taagata-ctg-a-a--ATT-G----GTG-------G--GT--CAG---G--GA-TT--GTTT-------------------------------
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 I 1
s Ursus_maritimus.KK499267.1                               4878335 38 -   5085361 caagaca-ctg-a-ag-gtt-t----gaa-------a--gc--cag---a--ag-CT--ATC--CTC---C-----------------------
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  31734 42 +     50397 caagaca-ttg-a-a-ggtt-t----gca-------a--gc--T-G---C--GG-CT--ATCCT----CCC-----------C--------ACC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1100575                              6823 42 +     25465 caagaca-ttg-a-a-ggtt-t----gca-------a--gc--T-G---C--GG-CT--ATCCT----CCC-----------C--------ACC
i Varecia_variegata.k141_1100575                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5390101 43 -   5488506 caagaca-ttg-a-ag-ttt-t----gta-------a--gc--caa---g--gG-CT--ACCC--TCC--A-----------T--------ATC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 42856 42 -     43706 caagaca-ctg-a-ag-gtt-t----gta-------g--gc--cag---g--ag-CT--ATC--CTC---A-----------T--------ACC
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                         24711 38 +    224448 CATGACA-TTC-A-A-GATC-T----GTA-------T--GC--CAT---G--GTCTGTTCTTC-------------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_17732         29920 38 +     86975 caagaca-ctg-a-ag-gtt-t----GCA-------C--GC--CAG---G--AG-CT--ATC--CTC---C-----------------------
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      38997 42 +     63895 CATGACT-ACA-A-A-GATC-T----CCA-------A--TG--CAG---G--GC-TCTCCTCT-------T-----------C--------ACC
i Zapus_hudsonius.ZapHud_scaffold_11398                  I 4 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21735 43 -     22999 caagaca-ctg-a-ag-gtt-t----gtg-------a--gc--cag---g--gg-CT--ACCC--TCC--A-----------T--------ATC
i Ziphius_cavirostris.ZipCav_flattened_line_16896        C 0 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Desmodus_rotundus.KZ672289.1                             8650437  3 +  20541912 I
e Carollia_perspicillata.CarPer_scaffold_737331                421  3 -       918 I
e Artibeus_jamaicensis.ArtJam_scaffold_25439                 26946  3 +     43469 I
e Tonatia_saurophila.TonSau_scaffold_294                    103728  3 +    610378 I
e Tadarida_brasiliensis.TadBra_scaffold_25820                31530  0 +     41958 C
e Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17424  0 +    116970 C
e Rhinolophus_sinicus.LVEH01000134.1                        389332  0 -   3329780 C
e Pteropus_vampyrus.KN525825.1                             1390053  0 +   4952924 C
e Pteropus_alecto.KB030862.1                              23005967  0 +  28871421 C
e Pteronotus_parnellii.KE854991.1                             1663  0 -     11709 C
e Mormoops_blainvillei.MorMeg_scaffold_1417                 162106  0 -    366855 C
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I
e Micronycteris_hirsuta.MicHir_scaffold_39861                18895  3 -     30105 I
e Megaderma_lyra.MegLyr_scaffold_4542                        36015  0 -    207569 C
e Macroglossus_sobrinus.MacSob_scaffold_4024                 24123  0 +    270270 C
e Hipposideros_galeritus.HipGal_scaffold_65612                9129  0 -     20285 C
e Hipposideros_armiger.JXIK01000431.1                       132216  0 +   1711038 C
e Eidolon_helvum.KE797349.1                                  19343  0 -     31197 C
e Craseonycteris_thonglongyai.CraTho_scaffold_153350           127  2 +      5041 I
e Anoura_caudifer.AnoCau_scaffold_1412                      209496  3 +    412891 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11263 32 +     36723 ATGAGACCTCAGC-CAG----CTGCC---------------G-CCCAGA--G--C-----------------C---A
s Acinonyx_jubatus.LLWD01001279.1                           836795 34 +   1699592 GTTAGACTTGAGC-CAA----CAACCC--------------A-CTCAGG--G--AA----------------A---A
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     10804 33 -     63021 ATTGCGCCTGAGC-CAA----CCCT-C--------------A-CTCTGA--A--G----------------GA---A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538483 28 -  29979442 -----AGTTCAGC-CAA----CTAC-C--------------A-CTCAGA--A--AA----------------G---A
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            107925 29 -    347723 -----acttaAGC-CAA----CTGCCC--------------A-CTCAGA--A--AA----------------G---A
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                     1493 34 +     61208 ATCAAACCTGAGC-CAA----CTGCCC--------------A-CCCTAA--A--A----------------GG---A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   40826 33 -     52922 AGGAGACCTCAGC-CAA----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          7148 33 +     11307 AGGAGGCCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Allochrocebus_lhoesti.k141_1932296                     C 0 C 0
s Allochrocebus_preussi.k141_499905                           7320 33 -     13300 AGGAGGCCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Allochrocebus_preussi.k141_499905                      C 0 C 0
s Allochrocebus_solatus.k141_139760                           9201 33 +     12926 AGGAGGCCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Allochrocebus_solatus.k141_139760                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             31866 34 +     51355 AGGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               25012 34 -     36483 AGGAGACCTCAGC-CAA----CTGCC-------G-------A-TCCAGA--A--AA----------------C---A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              7117 34 -     13496 AGGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23899 34 +     27940 AGGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15707 34 -     39310 AGGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            23965 34 +     30492 AGGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28196 34 +     47717 AGGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_2029433                            79168 34 +     87306 AGGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             39150 34 +     50774 AGGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--GA----------------C---A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707884 33 -   2318259 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      209499  4 +    412891 ---------------------------------------------------A--AA----------------G----
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 I 3
s Antilocapra_americana.AntAmePen_scaffold_43303             27113 33 -     32520 ATTAGGCCTGGAT-CAG----CTGC-C--------------A-CTAAGA--A--AA----------------G---A
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_2596348                                   5397 34 +     12024 ATGAGACCTCAGC-CAA----CTGCCC--------------A-TCCGGA--A--AA----------------C---A
i Aotus_azarae.k141_2596348                              C 0 C 0
s Aotus_griseimembra.k141_2227177                             5064 34 -     10972 ATGAGACCTCAGT-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Aotus_griseimembra.k141_2227177                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4333525 34 -   5030052 ATGAGACCTCAGC-CAA----CTGCCC--------------A-TCCGGA--A--AA----------------C---A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_1801223                              5457 34 -     12698 ATGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Aotus_trivirgatus.k141_1801223                         C 0 C 0
s Aotus_vociferans.k141_506037                                4917 34 -     11998 ATGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Aotus_vociferans.k141_506037                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22308 31 +     39421 ATTAGACTTGAGT-CTA----TTGTT---------T-----A-CCCTGAA-A-------------------------
i Aplodontia_rufa.AprRuf_scaffold_37633                  C 0 I 3
s Arctocebus_calabarensis.k141_1364444                       14394 34 +     45910 GCGTGACTCCAAT-CAA----CCACCC--------------A-CCCAGA--A--AA----------------G---A
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                 26949  4 +     43469 ---------------------------------------------------A--AA----------------G----
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 3 I 3
s Ateles_geoffroyi_b.tarseq_1536                             21232161 34 -  21539123 AGGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3233 34 -     48076 AGGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18699 34 -     22344 AGGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31755 34 -     89868 AGGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36168 34 -     40414 AGGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                44002 34 +     72325 AGGAGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75760 34 -     92717 ACGAGACCTCAGT-CAC----TTACCC--------------G-TCCAGA--A--AA----------------G---A
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              76343 34 +     85213 ACGAGACCTCAGT-CAC----TTACCC--------------G-TCCAGA--A--AA----------------G---A
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222543 34 +  23207421 GTTAGGCCTGTGT-CAA----TTGC-C--C-----------A-CCCAGA--A--AA----------------G---A
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4546 34 +     25979 ATTAGGCCTGTGT-CAA----TTGC-C--C-----------A-CCCAGA--A--AA----------------G---A
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     12942 33 -    124022 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                    233120 33 -    288883 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20306495 33 +  48749331 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1159597 33 -   1948126 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18116707 33 +  45695690 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2852162 33 +   4408762 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                117024 34 -    122966 AGGCGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76502 34 +     81800 AGGCGACCTCAGC-CAG----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45707 34 -     95584 AGGCGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69802 34 -    119600 AGGCGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020529 34 -  17673402 ATTAGACCTGAGC-CAG----CTGCCC--------------A-TCCAGA--A--AA----------------A---G
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2353359 34 -   7040546 ATTAGACCTGAGC-CAG----CTGCCC--------------A-TCCAGA--A--AA----------------A---G
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  421618 34 -   1652518 ATTAGACCTGAGC-CAG----CTGCCC--------------A-TCCAGA--A--AA----------------A---G
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17831821 34 -  60362399 AATAGACTTAAAC-CAA----CTGTTC--------------A-CTTAAA--A--A----------------TG---A
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32565 34 -     43241 AATAGACTTAAAC-CAA----CTGTTC--------------A-CTTAAA--A--A----------------TG---A
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067289 34 -   9314153 AATAGACTTAAAC-CAA----CTGTt--------------ca-cttaaa--a--a----------------tg---a
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17991948 34 -  59632846 AATAGACTTAAAC-CAA----CTGTt--------------ca-cttaaa--a--a----------------tg---a
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18533054 34 +  63665305 AATAGACTTAAAC-CAA----CTGTt--------------ca-cttaaa--a--a----------------tg---a
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18861947 33 +  46296322 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18092657 33 -  44709034 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_118970                   7398 16 -      8274 -------------------------C---------T-----A-TGGTGAA-AA-AA----------------A---A
i Capromys_pilorides.CapPil_scaffold_118970              N 0 C 0
s Carlito_syrichta.NW_007259797.1                           179979 34 -    496798 ATGAAACCTCAGC-CAC----CTGCCC--------------A-CCCAGA--A--AA----------------G---A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_737331                424  4 -       918 ---------------------------------------------------A--AA----------------G----
i Carollia_perspicillata.CarPer_scaffold_737331          I 3 I 7
s Castor_canadensis.CasCan_scaffold_2074                    167208 34 +    179628 ATTAGATGTGAAG-GGA----CT-GCC--------------A-CTCTGAA-A--A----------------TT---A
i Castor_canadensis.CasCan_scaffold_2074                 C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_2839                    113765 34 +    217609 TTTAGGCCTGAGC-CAA----CTGCCC--------------A-CCCAGA--A--AA----------------G---C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18367627 34 -  23392119 -NNNNNNNNNNNN-NNN----NNNNN--------------NN-NNNNNN-NN--N----------------NN---N
i Cavia_aperea.AVPZ01000300.1                            N 0 C 0
s Cavia_porcellus.DS562891.1                              18379892 34 -  23407841 -acagacgtcatt-cAG----CTACCC--------------T-CCATAAA-A--AA----------------G---A
i Cavia_porcellus.DS562891.1                             N 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       118735 34 +    143979 -ACAGACGTCATT-CAG----CTACCC--------------T-CCATAAA-A--AA----------------G---A
i Cavia_tschudii.CavTsc_scaffold_8919                    N 0 C 0
s Cebus_albifrons.Contig27                                25675646 34 +  26074798 ACGGGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               22114 34 +     28840 ACGGGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7785 34 +     13997 ACGGGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29903 34 +     31688 GTGAAACCTCAGC-CAC----CTGCCC--------------A-CCCAGA--A--AA----------------G---A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12257313 34 +  27778364 ATTAGACCTAAAA-CAA----CTGCCC--------------A-CCCAGA--A--AA----------------G---A
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          3020 34 +     15641 ATTAGACCTAAAA-CAA----CTGCCC--------------A-CCCAGA--A--AA----------------G---A
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4501798 32 +   4669795 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CC-AGA--A--C-----------------C---A
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_2766003                       23070 32 -     30935 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CC-AGA--A--C-----------------C---A
i Cercocebus_chrysogaster.k141_2766003                   C 0 C 0
s Cercocebus_lunulatus.k141_245046                            7472 32 +     18174 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CC-AGA--A--C-----------------C---A
i Cercocebus_lunulatus.k141_245046                       C 0 C 0
s Cercocebus_torquatus.k141_4063387                           7309 32 +     18249 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CC-AGA--A--C-----------------C---A
i Cercocebus_torquatus.k141_4063387                      C 0 C 0
s Cercopithecus_ascanius.k141_4281816                         2430 33 -      5884 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---G
i Cercopithecus_ascanius.k141_4281816                    C 0 C 0
s Cercopithecus_cephus.k141_1630443                           1454 33 +      4620 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---G
i Cercopithecus_cephus.k141_1630443                      C 0 C 0
s Cercopithecus_diana.k141_488174                             7890 33 +     10982 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---G
i Cercopithecus_diana.k141_488174                        C 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1436 33 +      4810 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---G
i Cercopithecus_hamlyni.k141_1302205                     C 0 C 0
s Cercopithecus_lowei.k141_4082698                            7352 33 +     34178 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---G
i Cercopithecus_lowei.k141_4082698                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38849462 33 +  39242232 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---G
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21256255 33 -  21565898 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---G
i Cercopithecus_mona.ctg39                               C 0 C 0
s Cercopithecus_neglectus.k141_557928                         7518 33 -     18401 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---G
i Cercopithecus_neglectus.k141_557928                    C 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7581 33 -     15013 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---G
i Cercopithecus_nictitans.k141_1200139                   C 0 C 0
s Cercopithecus_petaurista.k141_365908                        7552 33 +     11214 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---G
i Cercopithecus_petaurista.k141_365908                   C 0 C 0
s Cercopithecus_pogonias.k141_391400                          2372 33 -     13831 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---G
i Cercopithecus_pogonias.k141_391400                     C 0 C 0
s Cercopithecus_roloway.k141_1248991                         27546 33 +     68532 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---G
i Cercopithecus_roloway.k141_1248991                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             601 34 -      1897 AGCAGAACTGAGC-CAA----ACGGCC--------------T-TCCAGA--A--A----------------GA---A
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       I 15 C 0
s Cheirogaleus_major.k141_333249                             43751 34 -     52598 ACGAGACCGCAGT-CAC----CTACCC--------------A-CCCAGA--A--AA----------------G---A
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           39082 34 +     57038 ACGAAACCTCAGT-CAC----CTACCC--------------A-CCCAGA--A--AA----------------G---A
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Cheracebus_lucifer.k141_49986                               9922 33 -     17098 AGGAGCCCTCAGC-CAA----CTGCCC--------------A-T-CAGA--A--AA----------------C---A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9792 33 +     17877 AGGAGCCCTCAGC-CAA----CTGCCC--------------A-T-CAGA--A--AA----------------C---A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167359 33 -    216457 AGGAGCCCTCAGC-CAA----CTGCCC--------------A-T-CAGA--A--AA----------------C---A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71832 33 +     76511 AGGAGCCCTCAGC-CAA----CTGCCC--------------A-T-CAGA--A--AA----------------C---A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1276169 34 +   2543920 -ATAGACATCAGC-CAA----CTAAAC--------------A-CCATGAA-A--AA----------------G---G
i Chinchilla_lanigera.JH722012.1                         N 0 C 0
s Chiropotes_israelita.k141_747660                          114049 34 +    146308 AGGCGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          45957 34 -     50570 AGGCGACCTCAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455330 33 -  18827391 AGGAGGCCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41273 33 -     50209 AGGAGGCCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448255 33 + 135778131 AGGAGGCCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   830 33 -     25429 ATCAGAACTG-GC-CAA----ATGTCC--------------A-TCCAGA--A--A----------------GA---A
i Choloepus_didactylus.ChoDid_scaffold_22546             C 0 I 67
s Choloepus_hoffmanni.KN194906.1                            195958 33 +    839153 ATCAGAACTG-GC-CAA----ATGTCC--------------A-TCCAGA--A--A----------------GA---A
i Choloepus_hoffmanni.KN194906.1                         C 0 I 70
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               6988 34 -      9651 cttagaacagacc-AAA----ATGCCC--------------A-CCCAGA--A--AA----------------A---G
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          I 188 C 0
s Colobus_angolensis.KN981557.1                            1936197 33 +   2368649 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CTCAGA--A--C-----------------C---A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199970175 33 + 200372422 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CTCAGA--A--C-----------------C---A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              58489 33 +     84244 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CTCAGA--A--C-----------------C---A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17566951 25 -  53390261 ------------------------TCCTAC--TG-TGGCCCA-CC-CCA--A--CA----------------G---A
i Condylura_cristata.JH655891.1                          I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_153350           129  2 +      5041 ------------------------------------------------------------------------G---G
i Craseonycteris_thonglongyai.CraTho_scaffold_153350     I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 16715 28 +     83289 ATTTTACCTGAGC-CAA----TCAC-C--------------A-CTCTAT----------------------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 5
s Cricetulus_griseus.LT883664.1                           11697342 28 + 224834208 ATGACACCTTAGT-CAA----CCCT--------G-------A-CTCTGA----------------------------
i Cricetulus_griseus.LT883664.1                          C 0 I 5
s Crocidura_indochinensis.CroInd_scaffold_522851               107 29 +      2245 ATTAGATCTGAAT-TAA----CTACCC--------------A-CCCAAA----------------------------
i Crocidura_indochinensis.CroInd_scaffold_522851         C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59503 32 -     87169 GTTAGACTTGAGT-C-A----CTGCCC--------------A-ACCAGG--A--A-----------------A---A
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    859941 34 +   1526836 -TTAGACCTGACT-CAA----TTATC---------T-----G-CCCTAA-GA--A----------------TG---A
i Ctenodactylus_gundi.CteGun_scaffold_65                 N 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   6407 33 -     50838 -ACAGACATCTGT-A-A----CTACCC--------------A-TGGTGAA-A--AA----------------G---A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              N 0 C 0
s Cuniculus_paca.CunPac_flattened_line_167855                 1701 34 +      7355 -ATAGACATCAGT-CAA----CTACCC--------------A-CTAGGAA-A--AA----------------G---A
i Cuniculus_paca.CunPac_flattened_line_167855            N 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            19019 34 -     75252 -AGAGACATCAGT-CAA----CTACCC--------------A-CCATGAA-A--AA----------------G---A
i Dasyprocta_punctata.DasPun_flattened_line_15900        N 0 C 0
s Dasypus_novemcinctus.JH564415.1                            92386 31 +   2246927 ---AGAACTGGGC-CGA----ACGCCC--------------A-TCCAGA--A--A----------------GA---A
i Dasypus_novemcinctus.JH564415.1                        C 0 C 0
s Daubentonia_madagascariensis.ctg71                      12562511 33 -  12879189 ACAAGACCTCAG--TAG----CCACCC--------------A-CCCAGA--G--GA----------------G---A
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16841694 34 +  35494412 GTTAGGCCTGTGT-CAA----TTGC-C--C-----------A-CCCAGA--A--AA----------------G---A
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8650440  4 +  20541912 ---------------------------------------------------A--AA----------------G----
i Desmodus_rotundus.KZ672289.1                           I 3 I 3
s Dicerorhinus_sumatrensis.PEKH010002091.1                  699108 34 +   1390856 ATTAGACCTAAAA-CAA----CTGCCC--------------A-CCCAGA--A--AA----------------G---A
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                   31911 34 +    198055 ATTAGACCTAAAA-CAA----CTGCCC--------------A-CCCACA--A--AA----------------G---A
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    59905 34 +     67921 -ATAGACATCAGT-CAA----CTAAA---------T-----A-CCATGGA-A--AA----------------G---A
i Dinomys_branickii.DinBra_scaffold_21862                N 0 C 0
s Dipodomys_ordii.KN672350.1                              18914732 31 +  37912305 ATTAGCCCAGAGT-TAA----CT-CCC--------------A-CTCTGAA-G--A----------------------
i Dipodomys_ordii.KN672350.1                             C 0 I 2
s Dipodomys_stephensi.DipSte_scaffold_47531                  13330 31 -     26976 ATTAGCCCAGAGT-TAA----CT-CCC--------------A-CTCTGAA-G--A----------------------
i Dipodomys_stephensi.DipSte_scaffold_47531              C 0 I 2
s Eidolon_helvum.KE797349.1                                  19343  5 -     31197 ---------------------------------------------------A--AA----------------G---G
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_260697                 1648 15 +      2313 -ACAGACGTGAGT-CAA------------------------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_260697            N 0 I 12
s Elaphurus_davidianus.JRFZ01104969.1                       342120 28 +    607251 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA----------------------------
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 I 5
s Ellobius_lutescens.LOEQ01008920.1                          47746  9 -    110024 ATGACACCC--------------------------------------------------------------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 12
s Ellobius_talpinus.LOJH01050844.1                            8997  9 +     12610 ATGACACTC--------------------------------------------------------------------
i Ellobius_talpinus.LOJH01050844.1                       C 0 I 12
s Enhydra_lutris.KZ291758.1                               16365823 29 -  41312741 -----ATTTAAGC-CAA----CTGCCC--------------A-CTCAGA--A--AA----------------G---A
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1310432 34 +   4378816 ATTAGACCTGAAC-CAA----CTGTCC--------------A-CCCGGA--A--AA----------------G---A
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18557901 34 -  39960074 ATTAGACCTGAAC-CAA----CTGTCC--------------A-CCCGGA--A--AA----------------G---A
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               59942 34 +    498745 ATTAGACCTGAAC-CAA----CTGTCC--------------A-CCCGGA--A--AA----------------G---A
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3365485 14 -   7059049 ------------G-AAA----CTACCC--------------A-CCA-------------------------------
i Erinaceus_europaeus.JH835339.1                         I 211 I 5
s Erythrocebus_patas.Contig38                             21237536 33 -  21539334 AGGAGGCCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Erythrocebus_patas.Contig38                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           40867 34 +    133382 GTTAGGCCTGTGT-CAA----TTGC-C--C-----------A-CCCAGA--A--AA----------------G---A
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5169 34 -     25849 GTTAGGCCTGTGT-CAA----TTGC-C--C-----------A-CCCAGA--A--AA----------------G---A
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_1869827                             12870 34 -     21348 ACAAGACCTCAGT-CAC----CTACCC--------------A-CCCAGC--A--AA----------------G---A
i Eulemur_albifrons.k141_1869827                         C 0 C 0
s Eulemur_collaris.k141_601111                               10070 34 +     70999 ACAAGACCTCAGT-CAC----CTACCC--------------A-CCCAGC--A--AA----------------G---A
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                               7809 34 -    112731 ACAAGACCTCAGT-CAC----CTACCC--------------A-CCCAGC--A--AA----------------G---A
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                              6819 34 -     68309 ACAAGACCTCAGT-CAC----CTACCC--------------A-CCCAGC--A--AA----------------G---A
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_2627385                                 3955 34 -      9374 ACAAGACCTCAGT-CAC----CTACCC--------------A-CCCAGC--A--AA----------------G---A
i Eulemur_fulvus.k141_2627385                            C 0 C 0
s Eulemur_macaco.k141_1562045                                33050 34 +     75513 ACAAGACCTCAGT-CAC----CTACCC--------------A-CCCAGC--A--AA----------------G---A
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 30935 34 +     97555 ACAAGACCTCATT-CAC----CTACCC--------------A-CCCAGC--A--AA----------------G---A
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            7590 34 -     30972 ACAAGACCTCAGT-CAT----CTACCC--------------A-CCCAGC--A--AA----------------G---A
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_1120150                                  7467 34 +     16616 ACAAGACCTCAGT-CAC----CTACCC--------------A-CCCAGC--A--AA----------------G---A
i Eulemur_rufus.k141_1120150                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              34054 34 +    111500 ACAAGACCTCAGT-CAC----CTACCC--------------A-CCCAGC--A--AA----------------G---A
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20267936 34 + 206538554 GTTAGACTTGAGC-CAA----CAACCC--------------A-CTCAGG--G--AA----------------A---A
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20226718 34 + 205367284 GTTAGACTTGAGC-CAA----CAACCC--------------A-CTCAGG--G--AA----------------A---A
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  3744 34 -     25330 GTTAGACTTGAGC-CAA----CAACCC--------------A-CTCAGG--G--AA----------------A---A
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                             872357 34 +   3816255 -ATAGACATCAGT-CAA----CTACCC--------------A-CCATGTA-A--AA----------------G---A
i Fukomys_damarensis.KN121974.1                          N 0 C 0
s Galago_moholi.ctg3793                                        879 34 +    137831 ACGAGACCCTGAA-CAA----CTACCC--------------A-CCCAGA--A--AA----------------G---A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             1995 34 -     22493 ACGAGACCCTGAA-CAA----CTACCC--------------A-CCCAGA--A--AA----------------G---A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_1153324                           11884 34 +     12379 ACAAGACCCTGAA-CAA----CTATCC--------------A-CCtaga--a--a----------------ag---a
i Galagoides_demidoff.k141_1153324                       C 0 n 0
s Galeopterus_variegatus.GalVar_scaffold_75343               15945 34 -     17176 ATTAGAATTGAGC-CCA----GTGTCC--------------A-CCCAAG--A--AA----------------A---A
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     636977 33 -    660261 ATTAGGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_149316                            5292 31 +      8016 ATTACACCTGAGT-GGA----CCACTC--------------A-CCCTGAA-A-------------------------
i Glis_glis.GliGli_scaffold_149316                       C 0 I 3
s Gorilla_beringei.k141_179627                                1032 32 +      1068 ATGAGACCTCAGC-CAG----CTGCC---------------G-CCCAGA--G--C-----------------C---A
i Gorilla_beringei.k141_179627                           C 0 C 0
s Gorilla_gorilla.LT578341.1                             186365144 32 + 186649187 ATGAGACCTCAGC-CAG----CTGCC---------------G-CCCAGA--G--C-----------------C---A
i Gorilla_gorilla.LT578341.1                             I 42 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   55047 31 +     78134 ATTAGACCCGAGT-GGA----CTGCTC--------------A-CCCTGGA-A-------------------------
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 I 3
s Hapalemur_alaotrensis.k141_330369                           7464 34 +     40692 ACGAGACCTCAGT-CAC----CTACC---------T-----G-CCCAGC--A--AA----------------G---A
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_435261                             17152 34 +     22537 ACGAGACCTCAGT-CAC----CTACC---------T-----G-CCCAGC--A--AA----------------G---A
i Hapalemur_gilberti.k141_435261                         C 0 C 0
s Hapalemur_griseus.k141_679418                              15799 34 -     28566 ATGAGACCTCAGT-CAC----CTACC---------T-----G-CCCAGC--A--AA----------------G---A
i Hapalemur_griseus.k141_679418                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         14531 34 +     42923 ATGAGACCTCAGT-CAC----CTACC---------T-----G-CCCAGC--A--AA----------------G---A
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17786 34 +     53142 ACGAGACCTCAGT-CAC----CTACC---------T-----G-CCCAGC--A--AA----------------G---A
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               273191 33 +    327341 GTTAGACGTGAGC-CAA----CTGCCC--------------A-ACCAGG--A--A-----------------A---A
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14667 33 -     48891 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20686806 34 +  22651954 -aCAGACATCAGT-CAA----CTACCC--------------A-CCATGAA-A--AA----------------G---A
i Heterocephalus_glaber.JH602082.1                       N 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10348 15 -     15841 ------------------------CC---------------A-CCCAG---AAAAA----------------C---C
i Heterohyrax_brucei.HetBruBak_scaffold_90013            I 3 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6564 38 +     36432 ATTAGGCCTGAGT-CAA----CTACCC--CCC---------ACCCCAGA--A--AA----------------G---A
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       132216  5 +   1711038 ---------------------------------------------------a--a----------------ag---a
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_65612                9129  5 -     20285 ---------------------------------------------------A--AA----------------G---A
i Hipposideros_galeritus.HipGal_scaffold_65612           C 0 C 0
s Hoolock_leuconedys.ctg274                                    460562 33 +    630532 ATGAGATCTCAGC-CAT----CTGCCC--------------G-CCCAGA--G--C-----------------C---A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   9064 34 -     22022 GGTAGACTTGAGC-TAA----CTGCCC--------------A-ACCAGG--A--AA----------------A---A
i Hyaena_hyaena.HyaHya_flattened_line_62789              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            43306 34 -    143317 -ACAGACAGGAGT-CAA----CTACCC--------------A-CCACAAA-A--AA----------------G---A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        N 0 C 0
s Hylobates_agilis.k141_967383                                1831 33 -      4846 ATAAGATCTCAGC-CAT----CTGCCC--------------G-CCCAGA--G--C-----------------C---A
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                289 33 -      8919 ATAAGATCTCAGC-CAT----CTGCCC--------------G-CCCAGA--G--C-----------------C---A
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555260 33 - 191637585 ATAAGATCTCAGC-CAT----CTGCCC--------------G-CCCAGA--G--C-----------------C---A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3348147 33 -  11177569 ATAAGATCTCAGC-CAT----CTGCCC--------------G-CCCAGA--G--C-----------------C---A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                     101304 34 +    135385 -ATAGACATCAGA-CAA----CTATCC--------------C-CCATGAA-A--AA----------------G---A
i Hystrix_cristata.HysCri_scaffold_5660                  N 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543864 31 -   7955117 ATTATACCTGAGC-CAA----TCACCC--------------T-GCCTGAA-A-------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  I 4 I 3
s Indri_indri.k141_1997670                                    2291 34 +      8453 ACGAGACCTCAGT-CAC----CTACCC--------------G-CCCAGA--A--AA----------------G---A
i Indri_indri.k141_1997670                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29286 34 -     31341 GTTAGGCCTGTGT-CAA----CTGC-C--C-----------A-CTCAGA--A--AA----------------G---A
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8298750 34 -   9596543 ATCACACCTGAGC-CAA----CTGCCC--------------A-CCCTTA--A--A----------------GG---A
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                  5037 34 +     97402 GTTAGGCTTGTGT-CAA----TTGC----------T--C--A-CCCAGA--A--AA----------------G---A
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         33232 34 -     38430 AGGAGGCCTCAGC-CAA----CTTCCC--------------A-TCCAGA--A--AA----------------T---A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544452 34 -  30322482 ACGAGACCTCAGT-CAC----CTACCC--------------G-CCCAGC--A--AA----------------G---A
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_2922                            8836 34 -     24677 ACGAGACCTTAGT-CAC----CTACCC--------------A-CCCAGA--A--AA----------------G---A
i Lepilemur_ankaranensis.k141_2922                       C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4805 34 -     31569 ACGAGACCTTAGT-CAC----CTACCC--------------A-CCCAGA--A--AA----------------G---A
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                         22867 34 +     25010 ACGAGACCTTAGT-CAC----CTACCC--------------A-CCCAGA--A--AA----------------G---A
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      48421 34 +     54090 ACGAGACCTTAGT-CAC----CTACCC--------------A-CCCAGA--A--AA----------------G---A
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3074544 29 +   3914936 -----ACTTAAGC-CAA----CTGCCC--------------A-CTGAGA--A--AA----------------G---A
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_57262                     12972 32 -     23961 --GAGACTCGAAC-CAA----TTGCCC--------------A-CCCAGA--A--AA----------------A---A
i Lepus_americanus.LepAme_scaffold_57262                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             299203 34 -    662738 GTTAGGCCTGTGT-CAA----TTGC-C--C-----------A-CCCAGA--A--AA----------------G---C
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1464790 32 +   1826925 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CC-AGA--A--C-----------------C---A
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2958567                            3887 34 -     22734 ACGAGACCCTGAA-CAA----CTACC---------T-----A-CCCAGA--A--AA----------------G---A
i Loris_lydekkerianus.k141_2958567                       C 0 C 0
s Loris_tardigradus.ctg83                                  1061315 34 +   6120653 ACGAGACCCTGAA-CAA----CTACC---------T-----A-CCCAGA--A--AA----------------G---A
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17988188 34 -  59628241 AATAGACTTAAAC-CAA----ctgtt--------------ca-cttaaa--a--a----------------tg---a
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              33049 33 +     40492 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCGGA--A--C-----------------C---A
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59702974 33 +  60120075 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCGGA--A--C-----------------C---A
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_794849                                 7168 33 +      8714 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Macaca_cyclopis.k119_794849                            C 0 C 0
s Macaca_fascicularis.k141_814140                           107602 33 -    114318 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_943731                                  7413 33 +     13165 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Macaca_fuscata.k119_943731                             C 0 C 0
s Macaca_leonina.k141_2438370                                12786 33 -     14632 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Macaca_leonina.k141_2438370                            C 0 C 0
s Macaca_maura.k141_515834                                   12944 33 +     14712 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Macaca_maura.k141_515834                               C 0 C 0
s Macaca_mulatta.NC_041758.1                             186866983 33 + 187317192 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25492098 33 -  25927173 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCGGA--A--C-----------------C---A
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_128247                                   20414 33 +     98240 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Macaca_nigra.k141_128247                               C 0 C 0
s Macaca_radiata.k141_3254723                                 5956 33 +     10028 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCGGA--A--C-----------------C---A
i Macaca_radiata.k141_3254723                            C 0 C 0
s Macaca_siberu.k141_1929020                                  7208 33 -      9047 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Macaca_siberu.k141_1929020                             C 0 C 0
s Macaca_silenus.Contig273                                  358217 33 -    668171 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_596453                                 1589 33 -      5469 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCGGA--A--C-----------------C---A
i Macaca_thibetana.k99_596453                            C 0 C 0
s Macaca_tonkeana.k141_683787                                 7427 33 +      9199 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Macaca_tonkeana.k141_683787                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                 24123  5 +    270270 ---------------------------------------------------a--a----------------ag---g
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961866 32 -  24302211 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CC-AGA--A--C-----------------C---A
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               377619 32 +    752769 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CC-AGA--A--C-----------------C---A
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              40280 34 +    737560 AGTAGACCCGAGC-CAA----CTGCCC--------------A-CCCAga--a--a----------------ag---g
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              72450 34 -    317179 ATTAGACCTGAGC-CAA----CCGCCC--------------A-CCCAGA--A--AA----------------G---A
i Manis_pentadactyla.KN006162.1                          I 16 C 0
s Marmota_marmota.CZRN01000018.1                          33124928 31 -  40650429 ATTACACCTGAGC-CAA----TCACCC--------------T-CCCCGAA-A-------------------------
i Marmota_marmota.CZRN01000018.1                         I 4 I 3
s Megaderma_lyra.MegLyr_scaffold_4542                        36015  5 -    207569 ---------------------------------------------------A--AA----------------G---G
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23362 29 +     74585 -----ATTTAAGC-CAA----CTGCCC--------------A-CTCAGA--A--AA----------------G---A
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 66135 33 +    140813 ATGATGCCTAAGC-CAA----CCCT----------T-----A-CACTGA--A--A----------------GA---A
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12212446 28 -  29670104 ATGACACCTAAGC-CAA----CCCC--------G-------A-CTCTGA----------------------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 5
s Mesoplodon_bidens.MesBid_scaffold_74495                     5012 34 -     19186 GTTAGGCCTGTGT-CCA----TTGC-C--C-----------A-CCCAGA--A--AA----------------G---A
i Mesoplodon_bidens.MesBid_scaffold_74495                C 0 C 0
s Microcebus_murinus.CM007674.1                           18313422 34 -  93316391 ATGAGACCTCAGT-CGC----CTACCC--------------A-CCCAGA--A--AA----------------G---A
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_39861                18898  4 -     30105 ---------------------------------------------------A--AA----------------G----
i Micronycteris_hirsuta.MicHir_scaffold_39861            I 3 I 3
s Miopithecus_ogouensis.k141_791330                           1739 33 -     13566 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Miopithecus_ogouensis.k141_791330                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        24983 29 +     26817 -----ACTTAAGC-CAA----CTGCCC--------------G-CTGAGA--A--AA----------------G---A
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    56940 34 -    437263 GTTAGGCCTGTGT-CAA----TTGC-C--C-----------A-CCCAGA--A--AA----------------G---A
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 162106  4 -    366855 ---------------------------------------------------a--a----------------ag----
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 I 3
s Moschus_moschiferus.MosMos_scaffold_13123                  32119 33 +     82753 ATTAGGCCTGGAT-CAG----CTAC-C--------------A-CCCAGA--A--AA----------------G---A
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21771 36 +     63510 GTTAAACTTGAGC-CAA----CTGCC---------T-----A-ACCAGG--A--A-----------------AAAAA
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mus_pahari.LT608297.1                                   31390916 33 -  89631738 ACTACAATTGAAC-CAA----AATT-C--------------A-CTCTGA--A--A----------------GA---A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_74954             15599 31 -     17106 ATTAGACCTGAGT-GTA----CCGCTC--------------A-CCCTGTA-A-------------------------
i Muscardinus_avellanarius.MusAve_scaffold_74954         C 0 I 3
s Mustela_putorius.JH418006.1                               330575 29 -  14710649 -----ATTTAAGC-CAA----CTGCCC--------------A-CTGAGA--A--AA----------------G---A
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      5590 32 +     27262 -------------------------C---------T-----A-TGGTGAA-AA-AAAAAAAAAAAAAAAAAAA---A
i Myocastor_coypus.MyoCoy_scaffold_57531                 N 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14318 34 -     28317 ATGAGAGCTGAGC-CAA----ATTCCC--------------A-TCCAGA--A--A----------------GA---A
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 C 0
s Nasalis_larvatus.k141_970469                               18599 33 +     37058 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Nasalis_larvatus.k141_970469                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343536 29 +  31847680 -----ACTTAAGC-CAA----CTGCCC--------------A-CTGAGA--A--AA----------------G---A
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5894992 34 +   7148211 GTTAGGCCTGTGT-CAA----TTGC-C--C-----------A-CCCAGA--A--AA----------------G---A
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9182078 34 -   9404916 AATAGACTTAAAC-CAA----CTGTC--------------ca-cttaaa--a--a----------------tg---a
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102653429 34 - 196305487 ACGAGACCCTGAA-CAA----CTACC---------T-----A-CCCAGA--A--AA----------------G---A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_921975                              9571 34 +     15238 ACGAGACCCTGAA-CAA----CTACC---------T-----A-CCCAGA--A--AA----------------G---A
i Nycticebus_coucang.k141_921975                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827918 34 + 199412804 ACGAGACCCTGAA-CAA----CTACC---------T-----A-CCCAGA--A--AA----------------G---A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                  800309 34 +  11899542 -ATAGACACCAGTCT-A----CTGTCC--------------A-TGGTGAA-A--A----------------GG---A
i Octodon_degus.JH651603.1                               N 0 C 0
s Odobenus_rosmarus.KB229312.1                              534084 29 -   2017862 -----ACTTAAGC-CAA----ATGCCC--------------A-CTCGGA--A--AA----------------G---A
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         168789 33 +    630418 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107670 33 -    150152 ATTAGGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25297  9 +    140218 ATGACACCT--------------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 12
s Onychomys_torridus.OnyTor_scaffold_28377                   12454 35 +     41509 ATGACACCTGGGC-CAA----CCCC----------T-----G-CTCTGAAAG--A----------------GA---A
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  2812218 34 -  10937097 GTTAGGCCTGTGT-CAA----TTGC-C--C-----------A-CCCAGA--A--AA----------------G---A
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1849 34 -      4812 TTTAGGTCTGAGC-CAA----ATACCC--------------A-TCCATA--A--GA----------------C---A
i Orycteropus_afer.OryAfe_flattened_line_327065          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190575 33 + 174332312 --GAGACCCGAAC-CAA----TTGCCC--------------A-CCCAGA--A--AAA---------------A---A
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       495153 34 -    559221 AATAGACTTAAAC-CAA----CTGTc--------------ca-cttaaa--a--a----------------tg---a
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_187572                         4534 34 -      5557 ATGAGACCCTGAA-CAA----CTACCC--------------A-CCCAGA--A--AA----------------G---A
i Otolemur_crassicaudatus.k141_187572                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             738187 34 -   1103335 ATGAGACCCTGAA-CAA----CTACCC--------------A-CCGAGA--A--AA----------------G---A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17617600 33 +  44047080 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1601 33 -     13921 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Ovis_canadensis.OviCan_scaffold_75879                  C 0 C 0
s Pan_paniscus.KQ411608.1                                     3453 32 +     15831 ATGAGACCTCAGC-CAG----CTGCC---------------G-CCCAGA--G--C-----------------C---A
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649267 32 + 189151597 ATGAGACCTCAGC-CAG----CTGCC---------------G-CCCAGA--G--C-----------------C---A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  181610 34 +    230217 GTTAGACTTGAGC-CAA----CAACCC--------------A-CCCAGG--G--AA----------------A---A
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                296399 34 +  18783137 GTTAGACTTGAGC-CAA----CAACCC--------------A-CCCAGG--G--AA----------------A---A
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4751756 34 -   8748460 GTTAGACTTGAGC-CAA----CAACCC--------------A-CCCAGG--G--AA----------------A---A
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1296518 33 -   2937107 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183470039 32 + 183742232 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CC-AGA--A--C-----------------C---A
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_703094                              6377 32 -     17637 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CC-AGA--A--C-----------------C---A
i Papio_cynocephalus.k141_703094                         C 0 C 0
s Papio_hamadryas.Contig39                                20592536 32 +  20919399 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CC-AGA--A--C-----------------C---A
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  31801 32 +     41871 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CC-AGA--A--C-----------------C---A
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_2087334                                    7384 32 -     13745 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CC-AGA--A--C-----------------C---A
i Papio_papio.k141_2087334                               C 0 C 0
s Papio_ursinus.k141_4818248                                 14884 32 +     25215 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CC-AGA--A--C-----------------C---A
i Papio_ursinus.k141_4818248                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42527 34 -     78924 GTTAGACTTGAGC-CAA----CTGCCC--------------A-TTCAGG--A--AA----------------A---A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1387561                          11817 34 +     15382 ACAAGACTCCGAA-CAA----CTACCC--------------A-CCCAGA--A--AA----------------G---A
i Perodicticus_ibeanus.k141_1387561                      C 0 C 0
s Perodicticus_potto.k141_842195                             18367 34 -     21729 ACGAGACTCCGAA-CAA----CTACCC--------------A-CCCAGA--A--AA----------------G---A
i Perodicticus_potto.k141_842195                         C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13605 31 +     28765 TTTGGCCCAGAGT-TAA----CT-CC---------T-----A-CTCTGAA-G--A----------------------
i Perognathus_longimembris.PerPac_flattened_line_39705   C 0 I 2
s Peromyscus_maniculatus.KI615324.1                       18245210 35 -  18517816 ATGACACCTGAGC-CAA----CCCc---------------ta-ctctgaaaa--a----------------ga---a
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_384010                      688 29 +       811 ------CATCAGC-CAA----TAACTC--------------A-CCAGGAA-A--AA----------------G---C
i Petromus_typicus.PetTyp_scaffold_384010                N 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              38921 34 +     63832 GTTAGGCCTGTGT-CAA----TTGC-C--C-----------A-CCCAGA--A--AA----------------G---A
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                           28839 33 -     55023 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64257 33 +     89929 AGGAGACCTCAGG-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14348 33 -     40849 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326825 33 -  14605196 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                             19639 34 +     26961 ATGCGACCTCAGC-CAA----CTGCCC--------------A-TCCAGG--A--AA----------------C---A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15652 34 +     23417 ATGCGACCTCAGC-CAA----CTGCCC--------------A-TCCAGG--A--AA----------------C---A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19633 34 +     29694 ATGCGACCTCAGC-CAA----CTGCCC--------------A-TCCAGG--A--AA----------------C---A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44668 34 +     52772 ATGCGACCTCAGC-CAA----CTGCCC--------------A-TCCAGG--A--AA----------------C---A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19659 34 +     26198 ATGCGACCTCAGC-CAA----CTGCCC--------------A-TCCAGG--A--AA----------------C---A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3955994 34 +   4542175 ATGCGACCTCAGC-CAA----CTGCCC--------------A-TCCAGG--A--AA----------------C---A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19586 34 -     23490 ATGCGACCTCAGC-CAA----CTGCCC--------------A-TCCAGG--A--AA----------------C---A
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           5089 34 -      7527 GTTAGGCCTGTGT-CAA----TTGC-C--C-----------A-CCCAGA--A--AA----------------G---A
i Platanista_gangetica.PlaMin_flattened_line_175331      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       22359 33 -     39866 AGGAGCCCTCAGC-CGA----CTGCCC--------------A-T-CAGA--A--AA----------------C---A
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        31517 33 +     34906 AGGAGCCCTCAGC-CGA----CTGCCC--------------A-T-CAGA--A--AA----------------C---A
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       35780 33 +     87950 AGGAGCCCTCAGC-CGA----CTGCCC--------------A-T-CAGA--A--AA----------------C---A
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     36579 33 +     88961 AGGAGCCCTCAGC-CGA----CTGCCC--------------A-T-CAGA--A--AA----------------C---A
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         22272 33 +     39403 AGGAGCCCTCAGC-CGA----CTGCCC--------------A-T-CAGA--A--AA----------------C---A
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          36048 33 -     87928 AGGAGCCCTCAGC-CGA----CTGCCC--------------A-T-CAGA--A--AA----------------C---A
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         43029 33 +     60166 AGGAGCCCTCAGC-CGA----CTGCCC--------------A-T-CAGA--A--AA----------------C---A
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43222 33 +     67232 AGGAGCCCTCAGC-CGA----CTGCCC--------------A-T-CAGA--A--AA----------------C---A
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38687 33 +     90634 AGGAGCCCTCAGC-CGA----CTGCCC--------------A-T-CAGA--A--AA----------------C---A
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          36070 33 -     89403 AGGAGCCCTCAGC-CGA----CTGCCC--------------A-T-CAGA--A--AA----------------C---A
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189182048 33 + 189387572 ATGAGATCTCAGC-CAG----CTGCC---------T-----G-CTCAGA--G--C-----------------C---A
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9596942 33 +   9816681 ATGAGATCTCAGC-CAG----CTGCC---------T-----G-CTCAGA--G--C-----------------C---A
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              18424 33 -     69807 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Presbytis_comata.k141_1230337                          C 0 C 0
s Presbytis_mitrata.k141_584736                              11786 33 +     80239 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Presbytis_mitrata.k141_584736                          C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_112514                11665 15 +     16234 ------------------------CC---------------A-CCCAG---AAAAA----------------C---C
i Procavia_capensis.ProCapCap_scaffold_112514            I 3 C 0
s Prolemur_simus.MPIZ01000396.1                            2617086 29 -   4620579 ACGAGGCCTCAGT-CAC----CTACCC--------------G-CCCAGC----------------------------
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1013142 34 +   2598838 ACGAGACTTCAGT-CAC----TTACCC--------------G-CCCAGA--A--AA----------------G---A
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_114130                           9210 34 -     19127 ACGAGACTTCAGT-CAC----TTACCC--------------G-CCCAGA--A--AA----------------G---A
i Propithecus_coronatus.k141_114130                      C 0 C 0
s Propithecus_diadema.k141_599139                            10304 34 +     10533 ACGAGACTTCAGT-CAC----TTACCC--------------G-CCCAGA--A--AA----------------G---A
i Propithecus_diadema.k141_599139                        C 0 C 0
s Propithecus_edwardsi.k141_635656                             546 34 +     30655 ATGAGACTTCAGT-CAC----TTACCC--------------G-CCCAGA--A--AA----------------G---A
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_217725                            2738 34 +     14082 ACGAGACTTCAGT-CAC----TTACCC--------------G-CCCAGA--A--AA----------------G---A
i Propithecus_perrieri.k141_217725                       C 0 C 0
s Propithecus_tattersalli.k141_790011                        50423 34 -     67325 ACGAGACCTCAGT-CAC----TTATCC--------------G-CCCAGA--A--AA----------------G---A
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7216 34 -     35169 ACGAGGCTTCAGT-CAC----TTACCC--------------G-CCCAGA--A--AA----------------G---A
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036367.1                            19408 33 -     31435 ATGATGCCTAAGC-CAA----CCct---------------ta-cactga--a--a----------------ga---a
i Psammomys_obesus.NESX01036367.1                        C 0 C 0
s Pteronotus_parnellii.KE854991.1                             1663  4 -     11709 ---------------------------------------------------a--a----------------ag----
i Pteronotus_parnellii.KE854991.1                        C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14270 29 +     25061 -----ATTTAAGC-CAA----CTGCCC--------------A-CTCAGA--A--AA----------------G---A
i Pteronura_brasiliensis.PteBra_flattened_line_42152     C 0 C 0
s Pteropus_alecto.KB030862.1                              23005967  5 +  28871421 ---------------------------------------------------a--a----------------ag---g
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1390053  5 +   4952924 ---------------------------------------------------a--a----------------ag---g
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20306211 38 -  38429054 GTTAGACTTGAGC-CAACAACCAACCC--------------A-CTCAGG--G--AA----------------A---A
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             40494 33 -     91421 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Pygathrix_cinerea.k141_1153803                         C 0 C 0
s Pygathrix_nigripes_b.ctg100                                 7634674 33 +   7812017 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Pygathrix_nigripes_b.ctg100                               C 0 C 0
s Pygathrix_nigripes_a.k141_215492                             40536 33 -     72585 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Pygathrix_nigripes_a.k141_215492                         C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31261 33 +     55207 ATTAAGCCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53606166 33 +  90668790 ATTACATCTGAAC-CAG----CCTT-C--------------A-CTCTGA--A--A----------------GA---A
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        389332  5 -   3329780 ---------------------------------------------------A--AA----------------G---G
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_188731                            15742 33 -     21983 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Rhinopithecus_bieti.k119_188731                        C 0 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91262111 33 - 195417433 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Rhinopithecus_roxellana.NC_044550.1                    C 0 C 0
s Rhinopithecus_strykeri.ctg102                            7701202 33 +   7961872 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Rhinopithecus_strykeri.ctg102                          C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17424  5 +    116970 ---------------------------------------------------a--a----------------ag---g
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1321 33 -      3450 ATTAAACCTGGAT-CAG----CTGC-C--------------A-CCCAGA--A--AA----------------G---A
i Saiga_tatarica.SaiTat_scaffold_455678                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119968496 34 - 121099817 ATGAGACCCCAGC-CAG----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40789 34 +     46362 ATGAGACCCCAGC-CAG----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               40849 34 +     45824 ATGAGACCCCAGC-CAG----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             57517 34 -     64574 ATGAGACCCCAGC-CAG----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                              20610 34 -     23631 ATGAGACCCCAGC-CAG----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 40775 34 -     61129 ATGAGACCCCAGC-CAG----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5441982 25 -   5703754 ---------CAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Sapajus_apella.ctg103                                  I 9 I 1830
s Sapajus_macrocephalus.k141_351809                          73051 25 -     80660 ---------CAGC-CAA----CTGCCC--------------A-TCCAGA--A--AA----------------C---A
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    177079 26 -    313613 ------------------------CCCCATC-ACG-G-CCCA-CCTCCA--A--AA----------------G---A
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 1 C 0
s Semnopithecus_entellus.k141_1705875                         5742 33 +     17286 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Semnopithecus_entellus.k141_1705875                    C 0 C 0
s Semnopithecus_hypoleucos.k141_1910531                       5867 33 -     58920 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Semnopithecus_hypoleucos.k141_1910531                  C 0 C 0
s Semnopithecus_johnii.k141_843753                            5775 33 +     45317 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Semnopithecus_johnii.k141_843753                       C 0 C 0
s Semnopithecus_priam.k141_960425                             5888 33 +      9426 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Semnopithecus_priam.k141_960425                        C 0 C 0
s Semnopithecus_schistaceus.k141_972136                       5781 33 +     24620 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Semnopithecus_schistaceus.k141_972136                  C 0 C 0
s Semnopithecus_vetulus.k141_654052                           1711 33 -      5251 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Semnopithecus_vetulus.k141_654052                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                     4493 35 -     77746 ATGACACCCAAGC-CAA----CCCC-C--------------A-CTCTAAAAG--A----------------GA---A
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126              23171 46 +   1910179 CTTAGATCTGAGC-CAA----CTGCCC-ACCCAGGTG-CCCA-CCCAGG--G--A----------------TG---A
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13682322 29 -  18376816 ATCATACCTGAGC-CAA----CACCCC--------------A-TCCACA----------------------------
i Sorex_araneus.JH798187.1                               I 11 I 2
s Spermophilus_dauricus.KZ294078.1                         1976113 31 -   3870691 ATTATACCTGAGC-CAA----TCACCC--------------T-CCTTGAA-A-------------------------
i Spermophilus_dauricus.KZ294078.1                       I 4 I 3
s Spilogale_gracilis.SpiGra_flattened_line_13525             59045 25 +     97271 -----TCTTAAGC-CAA----CTGCCC--------------A-CTCAGA--A-------------------------
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_6629              48271 35 -    196729 GTTAGACATGAGC-CAA----CTGCCC--------------A-ACCAGG--A--A-----------------AAA-A
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   63023077 34 -  69701581 TTTAGACCTGAGC-CAA----CTGCTC--------------A-CCCAGA--A--AA----------------G---C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1105280 33 -   1523678 ATGAGATGTCAGC-CAT----CTGCCC--------------G-CCCAGA--G--C-----------------C---A
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                31530  5 +     41958 ---------------------------------------------------A--AA----------------T---A
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93833 34 +    116680 ATGAGAACTGAGC-CAA----ATGCCC--------------A-TCCAGA--A--A----------------GA---A
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138667 34 -    156842 ATTAGACCTGAAC-CAA----CTGCTC--------------A-CCCAGA--A--AA----------------G---A
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    407139 34 +    539355 ATTAGTCCTGAAC-CAA----CTACTC--------------A-CCCAGA--A--AA----------------G---A
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               50556 34 +     70052 ATGAAACCTCAGC-CAC----CTGCCC--------------A-CCCAGA--A--AA----------------G---A
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_722827                               14948 34 +     18080 ATGAAACCTCAGC-CAC----CTGCCC--------------A-CCCAGA--A--AA----------------G---A
i Tarsius_wallacei.k141_722827                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186466254 32 + 186847797 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CC-AGA--A--C-----------------C---A
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_62701               7449 29 -     21356 ------CATCAGT-CAA----CTACCC--------------A-CCAGGAA-A--AA----------------G---A
i Thryonomys_swinderianus.ThrSwi_scaffold_62701          N 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_41106                    5779 34 +     27660 AGCAGAACTGAGT-CAA----GCGGCC--------------T-TCCAGA--A--A----------------GC---A
i Tolypeutes_matacus.TolMat_scaffold_41106               I 18 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    103731  4 +    610378 ---------------------------------------------------A--AA----------------G----
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 I 3
s Trachypithecus_auratus.k141_95322                          12257 33 -     15799 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Trachypithecus_auratus.k141_95322                      C 0 C 0
s Trachypithecus_crepusculus.k141_539312                     25624 33 +     78344 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Trachypithecus_crepusculus.k141_539312                 C 0 C 0
s Trachypithecus_cristatus.k141_581431                       12428 33 -     15970 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Trachypithecus_cristatus.k141_581431                   C 0 C 0
s Trachypithecus_francoisi.k141_1453105                      11390 33 +     62838 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Trachypithecus_francoisi.k141_1453105                  C 0 C 0
s Trachypithecus_geei.k141_119873                            12355 33 -     17556 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Trachypithecus_geei.k141_119873                        C 0 C 0
s Trachypithecus_germaini.k141_545543                        12369 33 -     15912 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Trachypithecus_germaini.k141_545543                    C 0 C 0
s Trachypithecus_hatinhensis.k141_31479                      11319 33 +     64340 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Trachypithecus_hatinhensis.k141_31479                  C 0 C 0
s Trachypithecus_laotum.k141_928651                          12318 33 +     63452 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Trachypithecus_laotum.k141_928651                      C 0 C 0
s Trachypithecus_leucocephalus.k141_283481                   11393 33 +     21341 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Trachypithecus_leucocephalus.k141_283481               C 0 C 0
s Trachypithecus_melamera.k141_261742                         1455 33 +     11697 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Trachypithecus_melamera.k141_261742                    C 0 C 0
s Trachypithecus_obscurus.k141_170351                        13236 33 +     33539 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Trachypithecus_obscurus.k141_170351                    C 0 C 0
s Trachypithecus_phayrei.ctg124                            5965064 33 +   6242583 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Trachypithecus_phayrei.ctg124                          C 0 C 0
s Trachypithecus_pileatus.k141_583962                        13152 33 +     14028 AGGAGACCTCAGC-CAG----CTGCCC--------------A-CCCAGA--A--C-----------------C---A
i Trachypithecus_pileatus.k141_583962                    C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                     4953 33 +    200418 ATTAGGCCTGAGT-CAA----TTGC-C--------------A-CCTAGA--A--AA----------------G---A
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            4313735 27 +  10818551 ATTAGACCTGAGC-CAA----ATGCCC--------------A-TCCA------------------------------
i Trichechus_manatus.JH594705.1                          C 0 I 4
s Tursiops_truncatus.MRVK01000835.1                       15765631 34 +  33153633 ATTAGGCCTGTGT-CAA----TTGC-C--C-----------A-CCCAGA--A--AA----------------G---A
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     916 26 +     21056 ------------------------CTC-TCTCAGG-G-CATA-CCCCCA--A--AA----------------G---A
i Uropsilus_gracilis.UroGra_scaffold_46687               I 1 C 0
s Ursus_maritimus.KK499267.1                               4878373 29 -   5085361 -----ACTTCAGC-CAA----CTACCC--------------A-CTCAGA--A--AA----------------G---A
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  31776 34 +     50397 ACGAGACCTCAGT-CAC----CTACCC--------------G-CCCAGA--A--AA----------------G---A
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1100575                              6865 34 +     25465 ACAAGACCTCAGT-CAC----CTACCC--------------G-CCCAGA--A--AA----------------G---A
i Varecia_variegata.k141_1100575                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5390144 34 -   5488506 ATTAGACCTGAGC-CAG----CTGCCC--------------A-TCCAGA--A--AA----------------A---G
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 42898 34 -     43706 AATAGACTTAAAC-CAA----CTGTCC--------------A-CTTAAA--A--A----------------TG---A
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                         24753 31 +    224448 ATTATACCTAAGT-CAA----TCACCC--------------T-CCCTGAA-A-------------------------
i Xerus_inauris.XerIna_scaffold_2302                     I 4 I 3
s Zalophus_californianus.ZalCal_flattened_line_17732         29958 29 +     86975 -----ACTTAAGC-CAA----ATGCCC--------------A-CTCAGA--A--AA----------------G---A
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      39039 34 +     63895 ATCACACCTGCAC-CAA----CTGCCC--------------A-CTGTGA--A--A----------------GG---A
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21778 34 -     22999 ATTAGGTATGTGT-CCA----TTGC-C--C-----------A-CCCAGA--A--AA----------------G---A
i Ziphius_cavirostris.ZipCav_flattened_line_16896        C 0 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11295  5 +     36723 AG-----TT-G
s Acinonyx_jubatus.LLWD01001279.1                           836829  6 +   1699592 AG-----TTTG
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     10837  6 -     63021 AA-----AGCA
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538511  6 -  29979442 AG-----TTTG
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            107954  6 -    347723 AG-----TTTG
i Ailurus_fulgens.LNAC01001112.1                         C 0 I 10
s Allactaga_bullata.AllBul_scaffold_20030                     1527  6 +     61208 AG-----AGCT
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   40859  5 -     52922 AG-----TG-T
i Allenopithecus_nigroviridis.k141_3361533               C 0 I 5
s Allochrocebus_lhoesti.k141_1932296                          7181  5 +     11307 AG-----TG-T
i Allochrocebus_lhoesti.k141_1932296                     C 0 I 1
s Allochrocebus_preussi.k141_499905                           7353  5 -     13300 AG-----TG-T
i Allochrocebus_preussi.k141_499905                      C 0 I 1
s Allochrocebus_solatus.k141_139760                           9234  5 +     12926 AG-----TG-T
i Allochrocebus_solatus.k141_139760                      C 0 I 1
s Alouatta_belzebul.k141_3560514                             31900  5 +     51355 AG-----CG-T
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               25046  5 -     36483 AG-----CG-T
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              7151  5 -     13496 AG-----CG-T
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23933  5 +     27940 AG-----CA-T
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15741  5 -     39310 AG-----CG-T
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            23999  5 +     30492 AG-----CG-T
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28230  5 +     47717 AG-----CG-T
i Alouatta_palliata.k141_2135620                         C 0 I 3
s Alouatta_puruensis.k141_2029433                            79202  5 +     87306 AG-----CA-T
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             39184  5 +     50774 AG-----CG-T
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707917  5 -   2318259 AG-----T-TG
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      209506  4 +    412891 -------TTCA
i Anoura_caudifer.AnoCau_scaffold_1412                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303             27146  5 -     32520 AG-----T-TT
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_2596348                                   5431  5 +     12024 AG-----TG-T
i Aotus_azarae.k141_2596348                              C 0 C 0
s Aotus_griseimembra.k141_2227177                             5098  5 -     10972 AG-----TG-T
i Aotus_griseimembra.k141_2227177                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4333559  5 -   5030052 AG-----TG-T
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_1801223                              5491  5 -     12698 AG-----TG-T
i Aotus_trivirgatus.k141_1801223                         C 0 C 0
s Aotus_vociferans.k141_506037                                4951  5 -     11998 AG-----TG-T
i Aotus_vociferans.k141_506037                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22342  6 +     39421 AG-----TGTG
i Aplodontia_rufa.AprRuf_scaffold_37633                  I 3 C 0
s Arctocebus_calabarensis.k141_1364444                       14428 10 +     45910 AGCGAGCTA-G
i Arctocebus_calabarensis.k141_1364444                   C 0 I 6
s Artibeus_jamaicensis.ArtJam_scaffold_25439                 26956  4 +     43469 -------TTCA
i Artibeus_jamaicensis.ArtJam_scaffold_25439             I 3 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21232195  5 -  21539123 AG-----CG-T
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3267  5 -     48076 AG-----CG-T
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18733  5 -     22344 AG-----CG-T
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31789  5 -     89868 AG-----CG-T
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36202  5 -     40414 AG-----CA-T
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                44036  5 +     72325 AG-----CG-T
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75794 10 -     92717 AGCGAGCTG-G
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              76377 10 +     85213 AGCGAGCTG-G
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222577  6 +  23207421 AG-----TTCC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4580  6 +     25979 AG-----TTCA
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     12975  5 -    124022 AG-----T-TG
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                    233153  5 -    288883 AG-----T-TG
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20306528  5 +  48749331 AG-----T-TG
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1159630  5 -   1948126 AG-----T-TG
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18116740  5 +  45695690 AG-----T-TG
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2852195  5 +   4408762 AG-----T-TG
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                117058  5 -    122966 AG-----TG-T
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76536  5 +     81800 AG-----TG-T
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45741  5 -     95584 AG-----TG-T
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69836  5 -    119600 AG-----TG-T
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020563  6 -  17673402 AG-----TCAA
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2353393  6 -   7040546 AG-----TCAG
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  421652  6 -   1652518 AG-----TCAA
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17831855  6 -  60362399 AG-----TTTG
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32599  6 -     43241 AG-----TTTG
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067323  6 -   9314153 ag-----tttg
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17991982  6 -  59632846 ag-----tttg
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18533088  6 +  63665305 ag-----tttg
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18861980  5 +  46296322 AG-----T-TG
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18092690  5 -  44709034 AG-----T-TG
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_118970                   7414  6 -      8274 AG-----AGTG
i Capromys_pilorides.CapPil_scaffold_118970              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           180013  5 -    496798 AG-----CA-C
i Carlito_syrichta.NW_007259797.1                        C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_255479               2494  4 +      2981 -------TTCA
i Carollia_perspicillata.CarPer_scaffold_255479          n 7 I 95
s Castor_canadensis.CasCan_scaffold_2074                    167243  1 +    179628 ----------G
i Castor_canadensis.CasCan_scaffold_2074                 I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                    113799  6 +    217609 AA-----CTCA
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18367661  6 -  23392119 NN-----NNNN
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18379926  6 -  23407841 AG-----AGTG
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       118769  6 +    143979 AG-----AGTG
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebus_albifrons.Contig27                                25675680  5 +  26074798 CG-----TG-T
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               22148  5 +     28840 CG-----TG-T
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7819  5 +     13997 CG-----TG-T
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29937  5 +     31688 AG-----CA-C
i Cephalopachus_bancanus.k141_1423433                    C 0 I 1
s Ceratotherium_simum.JH767749.1                          12257347  6 +  27778364 AG-----TTCG
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          3054  6 +     15641 AG-----TTCG
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4501830  5 +   4669795 AG-----TG-T
i Cercocebus_atys.KQ010504.1                             C 0 I 1
s Cercocebus_chrysogaster.k141_2766003                       23102  5 -     30935 AG-----TG-T
i Cercocebus_chrysogaster.k141_2766003                   C 0 I 1
s Cercocebus_lunulatus.k141_245046                            7504  5 +     18174 AG-----TG-T
i Cercocebus_lunulatus.k141_245046                       C 0 I 1
s Cercocebus_torquatus.k141_4063387                           7341  5 +     18249 AG-----TG-T
i Cercocebus_torquatus.k141_4063387                      C 0 I 1
s Cercopithecus_ascanius.k141_4281816                         2463  5 -      5884 AG-----TG-T
i Cercopithecus_ascanius.k141_4281816                    C 0 I 1
s Cercopithecus_cephus.k141_1630443                           1487  5 +      4620 AG-----TG-T
i Cercopithecus_cephus.k141_1630443                      C 0 I 1
s Cercopithecus_diana.k141_488174                             7923  5 +     10982 AG-----TG-T
i Cercopithecus_diana.k141_488174                        C 0 I 1
s Cercopithecus_hamlyni.k141_1302205                          1469  5 +      4810 AG-----TG-T
i Cercopithecus_hamlyni.k141_1302205                     C 0 I 1
s Cercopithecus_lowei.k141_4082698                            7385  5 +     34178 AG-----TG-T
i Cercopithecus_lowei.k141_4082698                       C 0 I 1
s Cercopithecus_albogularis.ctg5                                38849495  5 +  39242232 AG-----TG-T
i Cercopithecus_albogularis.ctg5                               C 0 I 1
s Cercopithecus_mona.ctg39                                21256288  5 -  21565898 AG-----TG-T
i Cercopithecus_mona.ctg39                               C 0 I 1
s Cercopithecus_neglectus.k141_557928                         7551  5 -     18401 AG-----TG-T
i Cercopithecus_neglectus.k141_557928                    C 0 I 1
s Cercopithecus_nictitans.k141_1200139                        7614  5 -     15013 AG-----TG-T
i Cercopithecus_nictitans.k141_1200139                   C 0 I 1
s Cercopithecus_petaurista.k141_365908                        7585  5 +     11214 AG-----TG-T
i Cercopithecus_petaurista.k141_365908                   C 0 I 1
s Cercopithecus_pogonias.k141_391400                          2405  5 -     13831 AG-----TG-T
i Cercopithecus_pogonias.k141_391400                     C 0 I 1
s Cercopithecus_roloway.k141_1248991                         27579  5 +     68532 AG-----TG-T
i Cercopithecus_roloway.k141_1248991                     C 0 I 1
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             635  5 -      1897 AG-----G-GG
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       C 0 I 4
s Cheirogaleus_major.k141_333249                             43785 10 -     52598 CGCAAGCTA-G
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           39116 10 +     57038 CACGAGCTA-G
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Cheracebus_lucifer.k141_49986                               9955  5 -     17098 AG-----TG-T
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9825  5 +     17877 AG-----TG-T
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167392  5 -    216457 AG-----TG-T
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71865  5 +     76511 AG-----TG-T
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1276203  6 +   2543920 AG-----AATG
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                          114083  5 +    146308 AG-----TG-T
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          45991  5 -     50570 AG-----TG-T
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455363  5 -  18827391 AG-----TG-T
i Chlorocebus_aethiops.ctg25                             C 0 I 1
s Chlorocebus_pygerythrus.k141_1025673                       41306  5 -     50209 AG-----TG-T
i Chlorocebus_pygerythrus.k141_1025673                   C 0 I 1
s Chlorocebus_sabaeus.CM001947.1                         135448288  5 + 135778131 AG-----TG-T
i Chlorocebus_sabaeus.CM001947.1                         C 0 I 1
s Choloepus_didactylus.ChoDid_scaffold_22546                   930  5 -     25429 AG-----C-CA
i Choloepus_didactylus.ChoDid_scaffold_22546             I 67 I 2
s Choloepus_hoffmanni.KN194906.1                            196061  5 +    839153 ag-----c-ca
i Choloepus_hoffmanni.KN194906.1                         I 70 I 2
s Colobus_angolensis.KN981557.1                            1936230  5 +   2368649 AG-----TG-T
i Colobus_angolensis.KN981557.1                          C 0 I 1
s Colobus_guereza.LG01                                   199970208  5 + 200372422 AG-----TG-T
i Colobus_guereza.LG01                                   C 0 I 1
s Colobus_polykomos.k141_906115                              58522  5 +     84244 AG-----TG-T
i Colobus_polykomos.k141_906115                          C 0 I 1
s Condylura_cristata.JH655891.1                           17566976  6 -  53390261 AG-----TCCA
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_153350           131  6 +      5041 AT-----TTTA
i Craseonycteris_thonglongyai.CraTho_scaffold_153350     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 16748  6 +     83289 AA-----AGCT
i Cricetomys_gambianus.CriGam_scaffold_14425             I 5 C 0
s Cricetulus_griseus.LT883664.1                           11697375  6 + 224834208 AA-----AGCT
i Cricetulus_griseus.LT883664.1                          I 5 C 0
s Crocidura_indochinensis.CroInd_scaffold_522851               138  6 +      2245 AG-----TCTA
i Crocidura_indochinensis.CroInd_scaffold_522851         I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59535  6 -     87169 AC-----TTAG
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    859975  6 +   1526836 AC-----AGTG
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   6440  6 -     50838 AG-----AGTG
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_167855                 1735  6 +      7355 AG-----AGTG
i Cuniculus_paca.CunPac_flattened_line_167855            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            19053  6 -     75252 AG-----AGTG
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            92417  5 +   2246927 AG-----C-GG
i Dasypus_novemcinctus.JH564415.1                        C 0 I 755
s Daubentonia_madagascariensis.ctg71                      12562544 10 -  12879189 AGCGAGCTG-G
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16841728  6 +  35494412 AG-----TTCA
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8650447  4 +  20541912 -------TTCA
i Desmodus_rotundus.KZ672289.1                           I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  699142  6 +   1390856 AG-----TTCG
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                   31945  6 +    198055 AG-----TTCG
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    59939  6 +     67921 AG-----AATG
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18914765  1 +  37912305 ----------G
i Dipodomys_ordii.KN672350.1                             I 2 C 0
s Dipodomys_stephensi.DipSte_scaffold_47531                  13363  1 -     26976 ----------G
i Dipodomys_stephensi.DipSte_scaffold_47531              I 2 C 0
s Dolichotis_patagonum.DolPat_scaffold_260697                 1675  6 +      2313 AG-----AGTG
i Dolichotis_patagonum.DolPat_scaffold_260697            I 12 C 0
s Eidolon_helvum.KE797349.1                                  19348  6 -     31197 AT-----TCCA
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       342153  5 +    607251 AG-----T-TG
i Elaphurus_davidianus.JRFZ01104969.1                    I 5 C 0
s Ellobius_lutescens.LOEQ01008920.1                          47767  6 -    110024 AA-----AGCT
i Ellobius_lutescens.LOEQ01008920.1                      I 12 C 0
s Ellobius_talpinus.LOJH01050844.1                            9018  6 +     12610 AA-----AGCT
i Ellobius_talpinus.LOJH01050844.1                       I 12 C 0
s Enhydra_lutris.KZ291758.1                               16365852  6 -  41312741 AG-----TTTG
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1310466  6 +   4378816 AG-----TTCG
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18557935  6 -  39960074 AG-----TTTG
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               59976  6 +    498745 AG-----TTTG
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3365504  6 -   7059049 AG-----TTTG
i Erinaceus_europaeus.JH835339.1                         I 5 C 0
s Erythrocebus_patas.Contig38                             21237569  5 -  21539334 AG-----TG-T
i Erythrocebus_patas.Contig38                            C 0 I 1
s Eschrichtius_robustus.EscRob_flattened_line_8968           40901  6 +    133382 AG-----TTCA
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5203  6 -     25849 AG-----TTCA
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_1869827                             12904 10 -     21348 AGCGAGCTA-G
i Eulemur_albifrons.k141_1869827                         C 0 C 0
s Eulemur_collaris.k141_601111                               10104 10 +     70999 AGCGAGCTA-G
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                               7843 10 -    112731 AGCGAGCTA-G
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                              6853 10 -     68309 AGCGAGCTA-G
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_2627385                                 3989 10 -      9374 AGCGAGCTA-G
i Eulemur_fulvus.k141_2627385                            C 0 C 0
s Eulemur_macaco.k141_1562045                                33084 10 +     75513 AGCGAGCTA-G
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 30969 10 +     97555 AGCGAGCTA-G
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            7624 10 -     30972 AGCGAGCTA-G
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_1120150                                  7501 10 +     16616 AGCGAGCTA-G
i Eulemur_rufus.k141_1120150                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              34088 10 +    111500 AGCGAGCTA-G
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20267970  6 + 206538554 AG-----TTTG
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20226752  6 + 205367284 AG-----TTTG
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  3778  6 -     25330 AG-----TTTG
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                             872391  6 +   3816255 AG-----AGTG
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                        913 10 +    137831 AGCAAGCAA-A
i Galago_moholi.ctg3793                                  C 0 I 6
s Galago_senegalensis.k141_991736                             2029 10 -     22493 AGCAAGCTA-G
i Galago_senegalensis.k141_991736                        C 0 I 6
s Galagoides_demidoff.k141_561628                              150 10 +     32986 aGCAAGCTA-G
i Galagoides_demidoff.k141_561628                        T 17509 I 6
s Galeopterus_variegatus.GalVar_scaffold_75343               15979  6 -     17176 AG-----TGTG
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     637010  5 -    660261 AG-----T-TG
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_149316                            5326  6 +      8016 GG-----AGGG
i Glis_glis.GliGli_scaffold_149316                       I 3 C 0
s Gorilla_beringei.k141_179627                                1064  4 +      1068 AG-----TT--
i Gorilla_beringei.k141_179627                           C 0 T 289
s Gorilla_gorilla.LT578341.1                             186365176  5 + 186649187 AG-----TT-G
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   55081  6 +     78134 GG-----AGGG
i Graphiurus_murinus.GraMur_scaffold_10447               I 3 C 0
s Hapalemur_alaotrensis.k141_330369                           7498 10 +     40692 AGAGAGCTA-G
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_435261                             17186 10 +     22537 AGAGAGCTA-G
i Hapalemur_gilberti.k141_435261                         C 0 C 0
s Hapalemur_griseus.k141_679418                              15833 10 -     28566 AGAGAGCTA-G
i Hapalemur_griseus.k141_679418                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         14565 10 +     42923 AGAGAGCTA-G
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17820 10 +     53142 AGAGAGCTA-G
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               273224  6 +    327341 AT-----TTCT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14700  5 -     48891 AG-----T-TG
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20686840  6 +  22651954 AG-----AGTG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10363  5 -     15841 AA-----T-CT
i Heterohyrax_brucei.HetBruBak_scaffold_90013            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6602  6 +     36432 AG-----TTCA
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       132221  6 +   1711038 at-----ttca
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_65612                9134  6 -     20285 AT-----TTCA
i Hipposideros_galeritus.HipGal_scaffold_65612           C 0 C 0
s Hoolock_leuconedys.ctg274                                    460595  5 +    630532 GG-----TT-G
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   9098  6 -     22022 AG-----TTTG
i Hyaena_hyaena.HyaHya_flattened_line_62789              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            43340  1 -    143317 ----------G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_967383                                1864  5 -      4846 GG-----TT-G
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                322  5 -      8919 GG-----TT-G
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555293  5 - 191637585 GG-----TT-G
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3348180  5 -  11177569 GG-----TT-G
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                     101338  6 +    135385 AG-----AATG
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543898  6 -   7955117 CG-----CATG
i Ictidomys_tridecemlineatus.JH393364.1                  I 3 C 0
s Indri_indri.k141_1997670                                    2325 10 +      8453 CGTGAGCTG-G
i Indri_indri.k141_1997670                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29320  6 -     31341 AG-----TTCG
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8298784  6 -   9596543 AG-----AGCT
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                  5071  6 +     97402 AG-----TTCA
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         33266  5 -     38430 AG-----CG-T
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544486 10 -  30322482 AGAGAGCTA-G
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_2922                            8870 10 -     24677 AGCGAGCTA-G
i Lepilemur_ankaranensis.k141_2922                       C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4839 10 -     31569 AGCGAGCTA-G
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                         22901 10 +     25010 AGCGAGCTA-G
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      48455 10 +     54090 AGTGAGCTA-G
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3074573  6 +   3914936 TG-----TTCA
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_57262                     13004  6 -     23961 AG-----CAGG
i Lepus_americanus.LepAme_scaffold_57262                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             299237  6 -    662738 AG-----TTCA
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1464822  5 +   1826925 AG-----TG-T
i Lophocebus_aterrimus.ctg367                            C 0 I 1
s Loris_lydekkerianus.k141_2958567                            3921 10 -     22734 AGCAAGCTA-G
i Loris_lydekkerianus.k141_2958567                       C 0 I 6
s Loris_tardigradus.ctg83                                  1061349 10 +   6120653 AGCAAGCTA-G
i Loris_tardigradus.ctg83                                C 0 I 6
s Lycaon_pictus.CM007581.1                                17988222  6 -  59628241 ag-----tttg
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              33082  5 +     40492 AG-----TG-T
i Macaca_arctoides.k141_2326796                          C 0 I 1
s Macaca_assamensis.Contig5                               59703007  5 +  60120075 AG-----TG-T
i Macaca_assamensis.Contig5                              C 0 I 1
s Macaca_cyclopis.k119_794849                                 7201  5 +      8714 AG-----TG-T
i Macaca_cyclopis.k119_794849                            C 0 I 1
s Macaca_fascicularis.k141_814140                           107635  5 -    114318 AG-----TG-T
i Macaca_fascicularis.k141_814140                        C 0 I 1
s Macaca_fuscata.k119_943731                                  7446  5 +     13165 AG-----TG-T
i Macaca_fuscata.k119_943731                             C 0 I 1
s Macaca_leonina.k141_2438370                                12819  5 -     14632 AG-----TG-T
i Macaca_leonina.k141_2438370                            C 0 I 1
s Macaca_maura.k141_515834                                   12977  5 +     14712 AG-----TG-T
i Macaca_maura.k141_515834                               C 0 I 1
s Macaca_mulatta.NC_041758.1                             186867016  5 + 187317192 AG-----TG-T
i Macaca_mulatta.NC_041758.1                             C 0 I 1
s Macaca_nemestrina.KQ007038.1                            25492131  5 -  25927173 AG-----TG-T
i Macaca_nemestrina.KQ007038.1                           C 0 I 1
s Macaca_nigra.k141_128247                                   20447  5 +     98240 AG-----TG-T
i Macaca_nigra.k141_128247                               C 0 I 1
s Macaca_radiata.k141_3254723                                 5989  5 +     10028 AG-----TG-T
i Macaca_radiata.k141_3254723                            C 0 I 1
s Macaca_siberu.k141_1929020                                  7241  5 -      9047 AG-----CG-T
i Macaca_siberu.k141_1929020                             C 0 I 1
s Macaca_silenus.Contig273                                  358250  5 -    668171 AG-----TG-T
i Macaca_silenus.Contig273                               C 0 I 1
s Macaca_thibetana.k99_596453                                 1622  5 -      5469 AG-----TG-T
i Macaca_thibetana.k99_596453                            C 0 I 1
s Macaca_tonkeana.k141_683787                                 7460  5 +      9199 AG-----TG-T
i Macaca_tonkeana.k141_683787                            C 0 I 1
s Macroglossus_sobrinus.MacSob_scaffold_4024                 24128  6 +    270270 at-----tTCA
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961898  5 -  24302211 AG-----TG-T
i Mandrillus_leucophaeus.scaffold280                     C 0 I 1
s Mandrillus_sphinx.Contig270                               377651  5 +    752769 AG-----TG-T
i Mandrillus_sphinx.Contig270                            C 0 I 1
s Manis_javanica.JSZB01003497.1                              40314  6 +    737560 ag-----ttca
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              72484  6 -    317179 AG-----TTCG
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33124962  6 -  40650429 AG-----CATG
i Marmota_marmota.CZRN01000018.1                         I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        36020  6 -    207569 AT-----GCCT
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23391  6 +     74585 AG-----CTTA
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 66168  6 +    140813 AA-----ATCT
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 C 0
s Mesocricetus_auratus.KB708134.1                         12212479  6 -  29670104 AA-----AGCT
i Mesocricetus_auratus.KB708134.1                        I 5 C 0
s Mesoplodon_bidens.MesBid_scaffold_74495                     5046  6 -     19186 AG-----TTCA
i Mesoplodon_bidens.MesBid_scaffold_74495                C 0 C 0
s Microcebus_murinus.CM007674.1                           18313456 10 -  93316391 CGCAAGCTG-G
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_39861                18905  4 -     30105 -------TTCA
i Micronycteris_hirsuta.MicHir_scaffold_39861            I 3 C 0
s Miopithecus_ogouensis.k141_791330                           1772  5 -     13566 AG-----TG-T
i Miopithecus_ogouensis.k141_791330                      C 0 I 1
s Mirounga_angustirostris.MirAng_flattened_line_55178        25012  6 +     26817 TG-----TTCA
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    56974  6 -    437263 AG-----TTCA
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 162113  4 -    366855 -------ttca
i Mormoops_blainvillei.MorMeg_scaffold_1417              I 3 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32152  5 +     82753 AG-----T-TG
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21807  6 +     63510 AG-----TTCG
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mus_pahari.LT608297.1                                   31390949  6 -  89631738 AA-----ATCT
i Mus_pahari.LT608297.1                                  C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_74954             15633  6 -     17106 GG-----AGGG
i Muscardinus_avellanarius.MusAve_scaffold_74954         I 3 C 0
s Mustela_putorius.JH418006.1                               330604  6 -  14710649 AG-----TTTG
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      5622  6 +     27262 AG-----AGTG
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14352  5 -     28317 AT-----G-GG
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 I 2
s Nasalis_larvatus.k141_970469                               18632  5 +     37058 AG-----TG-T
i Nasalis_larvatus.k141_970469                           C 0 I 1
s Neomonachus_schauinslandi.NINY01007730.1                20343565  6 +  31847680 TG-----TTCA
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5895026  6 +   7148211 AG-----TTCA
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9182112  6 -   9404916 ag-----tttg
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102653463 10 - 196305487 TGCAAGCTA-G
i Nycticebus_bengalensis.LG01                            C 0 I 6
s Nycticebus_coucang.k141_921975                              9605 10 +     15238 TGCAAGCTA-G
i Nycticebus_coucang.k141_921975                         C 0 I 6
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827952 10 + 199412804 TGCAAGCTA-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 I 6
s Octodon_degus.JH651603.1                                  800343  6 +  11899542 AG-----AGAG
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              534113  6 -   2017862 AG-----TTCA
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         168822  5 +    630418 AG-----T-TG
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107703  5 -    150152 AG-----T-TG
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25318  6 +    140218 AA-----AGCT
i Ondatra_zibethicus.OndZib_scaffold_7387                I 12 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                   12489  6 +     41509 AA-----AACT
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 C 0
s Orcinus_orca.KB316932.1                                  2812252  6 -  10937097 AG-----TTCA
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1883  5 -      4812 GT-----T-TG
i Orycteropus_afer.OryAfe_flattened_line_327065          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190608  6 + 174332312 AG-----CATG
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       495187  6 -    559221 ag-----tttg
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_187572                         4568 10 -      5557 AGCAAGCTA-G
i Otolemur_crassicaudatus.k141_187572                    C 0 I 6
s Otolemur_garnettii.GL873799.1                             738221 10 -   1103335 AGCAAGCTA-G
i Otolemur_garnettii.GL873799.1                          C 0 I 6
s Ovis_aries.CM001607.2                                   17617633  5 +  44047080 AG-----T-TG
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1634  5 -     13921 AG-----T-TG
i Ovis_canadensis.OviCan_scaffold_75879                  C 0 C 0
s Pan_paniscus.KQ411608.1                                     3485  5 +     15831 AG-----TT-G
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649299  5 + 189151597 AG-----TT-G
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  181644  6 +    230217 AG-----TTTG
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                296433  6 +  18783137 AG-----TTTG
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4751790  6 -   8748460 AG-----TTTG
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1296551  5 -   2937107 AG-----T-TG
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183470071  5 + 183742232 AG-----TG-T
i Papio_anubis.CM001495.2                                C 0 I 1
s Papio_cynocephalus.k141_703094                              6409  5 -     17637 AG-----TG-T
i Papio_cynocephalus.k141_703094                         C 0 I 1
s Papio_hamadryas.Contig39                                20592568  5 +  20919399 AG-----TG-T
i Papio_hamadryas.Contig39                               C 0 I 1
s Papio_kindae.k141_1936966                                  31833  5 +     41871 AG-----TG-T
i Papio_kindae.k141_1936966                              C 0 I 1
s Papio_papio.k141_2087334                                    7416  5 -     13745 AG-----TG-T
i Papio_papio.k141_2087334                               C 0 I 1
s Papio_ursinus.k141_4818248                                 14916  5 +     25215 AG-----TG-T
i Papio_ursinus.k141_4818248                             C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42561  6 -     78924 AG-----TGTG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1387561                          11851 10 +     15382 AGCAAGCTA-G
i Perodicticus_ibeanus.k141_1387561                      C 0 I 6
s Perodicticus_potto.k141_842195                             18401 10 -     21729 AGCAAGCTA-G
i Perodicticus_potto.k141_842195                         C 0 I 6
s Perognathus_longimembris.PerPac_flattened_line_39705       13638  1 +     28765 ----------A
i Perognathus_longimembris.PerPac_flattened_line_39705   I 2 C 0
s Peromyscus_maniculatus.KI615324.1                       18245245  6 -  18517816 aa-----agct
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_384010                      717  6 +       811 AG-----AGTG
i Petromus_typicus.PetTyp_scaffold_384010                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              38955  6 +     63832 AG-----TTCA
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                           28872  5 -     55023 AG-----TG-T
i Piliocolobus_badius.k141_2704958                       C 0 I 1
s Piliocolobus_gordonorum.k141_381342                        64290  5 +     89929 AG-----TG-T
i Piliocolobus_gordonorum.k141_381342                    C 0 I 1
s Piliocolobus_kirkii.k141_1310104                           14381  5 -     40849 AG-----TG-T
i Piliocolobus_kirkii.k141_1310104                       C 0 I 1
s Piliocolobus_tephrosceles.PDMG02000141.1                14326858  5 -  14605196 AG-----TG-T
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 I 1
s Pithecia_albicans.k141_1476471                             19673  5 +     26961 AG-----TG-T
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15686  5 +     23417 AG-----TG-T
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19667  5 +     29694 AG-----TG-T
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44702  5 +     52772 AG-----TG-T
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19693  5 +     26198 AG-----TG-T
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3956028  5 +   4542175 AG-----TG-T
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19620  5 -     23490 AG-----TG-T
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           5123  6 -      7527 AG-----TTCA
i Platanista_gangetica.PlaMin_flattened_line_175331      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       22392  5 -     39866 AG-----TG-T
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        31550  5 +     34906 AG-----TG-T
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       35813  5 +     87950 AG-----TG-T
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     36612  5 +     88961 AG-----TG-T
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         22305  5 +     39403 AG-----TG-T
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          36081  5 -     87928 AG-----TG-T
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         43062  5 +     60166 AG-----TG-T
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43255  5 +     67232 AG-----TG-T
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38720  5 +     90634 AG-----TG-T
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          36103  5 -     89403 AG-----TG-T
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189182081  5 + 189387572 AG-----TT-G
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9596975  5 +   9816681 AG-----TT-G
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              18457  5 -     69807 AG-----TG-T
i Presbytis_comata.k141_1230337                          C 0 I 1
s Presbytis_mitrata.k141_584736                              11819  5 +     80239 AG-----TG-T
i Presbytis_mitrata.k141_584736                          C 0 I 1
s Procavia_capensis.ProCapCap_scaffold_112514                11680  5 +     16234 GG-----T-CT
i Procavia_capensis.ProCapCap_scaffold_112514            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2617115 10 -   4620579 AGAGAGCTA-G
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1013176 10 +   2598838 AGCAAGGTG-G
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_114130                           9244 10 -     19127 AGCAAGGTG-G
i Propithecus_coronatus.k141_114130                      C 0 C 0
s Propithecus_diadema.k141_599139                            10338 10 +     10533 AGCAAGCTG-G
i Propithecus_diadema.k141_599139                        C 0 C 0
s Propithecus_edwardsi.k141_635656                             580 10 +     30655 AGCAAGCTG-G
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_217725                            2772 10 +     14082 AGCAAGCTG-G
i Propithecus_perrieri.k141_217725                       C 0 C 0
s Propithecus_tattersalli.k141_790011                        50457 10 -     67325 AGCAAGGTG-G
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7250 10 -     35169 AGCAAGGTG-G
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036367.1                            19441  6 -     31435 aa-----atct
i Psammomys_obesus.NESX01036367.1                        C 0 C 0
s Pteronotus_parnellii.KE854991.1                             1670  4 -     11709 -------ttca
i Pteronotus_parnellii.KE854991.1                        I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14299  6 +     25061 AG-----TTTG
i Pteronura_brasiliensis.PteBra_flattened_line_42152     C 0 C 0
s Pteropus_alecto.KB030862.1                              23005972  6 +  28871421 at-----tTTG
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1390058  6 +   4952924 at-----ttcg
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20306249  6 -  38429054 AG-----TTTG
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             40527  5 -     91421 AG-----TG-T
i Pygathrix_cinerea.k141_1153803                         C 0 I 1
s Pygathrix_nigripes_b.ctg100                                 7634707  5 +   7812017 AG-----TG-T
i Pygathrix_nigripes_b.ctg100                               C 0 I 1
s Pygathrix_nigripes_a.k141_215492                             40569  5 -     72585 AG-----TG-T
i Pygathrix_nigripes_a.k141_215492                         C 0 I 1
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31294  5 +     55207 AG-----T-TG
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53606199  6 +  90668790 AA-----CACT
i Rattus_norvegicus.chr16                                C 0 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        389337  6 -   3329780 AT-----TTCA
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_188731                            15775  5 -     21983 AG-----TG-T
i Rhinopithecus_bieti.k119_188731                        C 0 I 1
s Rhinopithecus_roxellana.NC_044550.1                     91262144  5 - 195417433 AG-----TG-T
i Rhinopithecus_roxellana.NC_044550.1                    C 0 I 1
s Rhinopithecus_strykeri.ctg102                            7701235  5 +   7961872 AG-----TG-T
i Rhinopithecus_strykeri.ctg102                          C 0 I 1
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17429  6 +    116970 at-----ttca
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1354  5 -      3450 AG-----T-TG
i Saiga_tatarica.SaiTat_scaffold_455678                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119968530  5 - 121099817 AG-----TG-T
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40823  5 +     46362 AG-----TG-T
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               40883  5 +     45824 AG-----TG-T
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             57551  5 -     64574 AG-----TG-T
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                              20644  5 -     23631 AG-----TG-T
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 40809  5 -     61129 AG-----TG-T
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5443837  5 -   5703754 CG-----TG-T
i Sapajus_apella.ctg103                                  I 1830 C 0
s Sapajus_macrocephalus.k141_351809                          73076  5 -     80660 CG-----TG-T
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    177105  6 -    313613 AG-----CCCA
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 C 0
s Semnopithecus_entellus.k141_1705875                         5775  5 +     17286 AG-----TG-T
i Semnopithecus_entellus.k141_1705875                    C 0 I 1
s Semnopithecus_hypoleucos.k141_1910531                       5900  5 -     58920 AG-----TG-T
i Semnopithecus_hypoleucos.k141_1910531                  C 0 I 1
s Semnopithecus_johnii.k141_843753                            5808  5 +     45317 AG-----TG-T
i Semnopithecus_johnii.k141_843753                       C 0 I 1
s Semnopithecus_priam.k141_960425                             5921  5 +      9426 AG-----TG-T
i Semnopithecus_priam.k141_960425                        C 0 I 1
s Semnopithecus_schistaceus.k141_972136                       5814  5 +     24620 AG-----TG-T
i Semnopithecus_schistaceus.k141_972136                  C 0 I 1
s Semnopithecus_vetulus.k141_654052                           1744  5 -      5251 AG-----TG-T
i Semnopithecus_vetulus.k141_654052                      C 0 I 1
s Sigmodon_hispidus.SigHis_scaffold_20193                     4528  4 -     77746 AA-----AG--
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_126              23217  6 +   1910179 AG-----TTTG
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13682353  6 -  18376816 AG-----TCTG
i Sorex_araneus.JH798187.1                               I 2 C 0
s Spermophilus_dauricus.KZ294078.1                         1976147  6 -   3870691 AG-----CATG
i Spermophilus_dauricus.KZ294078.1                       I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             59073  6 +     97271 AG-----TTTG
i Spilogale_gracilis.SpiGra_flattened_line_13525         I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              48306  6 -    196729 GG-----TTCA
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   63023111  6 -  69701581 AA-----TTCA
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1105313  5 -   1523678 GG-----TT-G
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                31535  6 +     41958 TT-----TTCA
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93867  5 +    116680 AT-----G-GA
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 I 2
s Tapirus_indicus.TapInd_scaffold_9301                      138701  6 -    156842 AG-----TTCG
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    407173  6 +    539355 AG-----TTCG
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               50590  5 +     70052 AG-----CA-C
i Tarsius_lariang.k141_2201908                           C 0 I 1
s Tarsius_wallacei.k141_722827                               14982  5 +     18080 AG-----CA-C
i Tarsius_wallacei.k141_722827                           C 0 I 1
s Theropithecus_gelada.CM009954.1                        186466286  5 + 186847797 AG-----TG-T
i Theropithecus_gelada.CM009954.1                        C 0 I 1
s Thryonomys_swinderianus.ThrSwi_scaffold_62701               7478  6 -     21356 AG-----AGTG
i Thryonomys_swinderianus.ThrSwi_scaffold_62701          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_41106                    5813  5 +     27660 AG-----G-GG
i Tolypeutes_matacus.TolMat_scaffold_41106               C 0 I 4
s Tonatia_saurophila.TonSau_scaffold_294                    103738  4 +    610378 -------TTCA
i Tonatia_saurophila.TonSau_scaffold_294                 I 3 C 0
s Trachypithecus_auratus.k141_95322                          12290  5 -     15799 AG-----TG-T
i Trachypithecus_auratus.k141_95322                      C 0 I 1
s Trachypithecus_crepusculus.k141_539312                     25657  5 +     78344 AG-----TG-T
i Trachypithecus_crepusculus.k141_539312                 C 0 I 1
s Trachypithecus_cristatus.k141_581431                       12461  5 -     15970 AG-----TG-T
i Trachypithecus_cristatus.k141_581431                   C 0 I 1
s Trachypithecus_francoisi.k141_1453105                      11423  5 +     62838 AG-----TG-T
i Trachypithecus_francoisi.k141_1453105                  C 0 I 1
s Trachypithecus_geei.k141_119873                            12388  5 -     17556 AG-----TG-T
i Trachypithecus_geei.k141_119873                        C 0 I 1
s Trachypithecus_germaini.k141_545543                        12402  5 -     15912 AG-----TG-T
i Trachypithecus_germaini.k141_545543                    C 0 I 1
s Trachypithecus_hatinhensis.k141_31479                      11352  5 +     64340 AG-----TG-T
i Trachypithecus_hatinhensis.k141_31479                  C 0 I 1
s Trachypithecus_laotum.k141_928651                          12351  5 +     63452 AG-----TG-T
i Trachypithecus_laotum.k141_928651                      C 0 I 1
s Trachypithecus_leucocephalus.k141_283481                   11426  5 +     21341 AG-----TG-T
i Trachypithecus_leucocephalus.k141_283481               C 0 I 1
s Trachypithecus_melamera.k141_261742                         1488  5 +     11697 AG-----TG-T
i Trachypithecus_melamera.k141_261742                    C 0 I 1
s Trachypithecus_obscurus.k141_170351                        13269  5 +     33539 AG-----TG-T
i Trachypithecus_obscurus.k141_170351                    C 0 I 1
s Trachypithecus_phayrei.ctg124                            5965097  5 +   6242583 AG-----TG-T
i Trachypithecus_phayrei.ctg124                          C 0 I 1
s Trachypithecus_pileatus.k141_583962                        13185  5 +     14028 AG-----TG-T
i Trachypithecus_pileatus.k141_583962                    C 0 I 1
s Tragulus_javanicus.TraJav_scaffold_3462                     4986  6 +    200418 AG-----TTCG
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            4313766  5 +  10818551 GT-----T-TG
i Trichechus_manatus.JH594705.1                          I 4 C 0
s Tursiops_truncatus.MRVK01000835.1                       15765665  6 +  33153633 AG-----TTCA
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     942  6 +     21056 AG-----TCCG
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                               4878402  6 -   5085361 AG-----TTTG
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  31810 10 +     50397 AGCAAGCTA-G
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1100575                              6899 10 +     25465 AGCAAGCTA-G
i Varecia_variegata.k141_1100575                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5390178  6 -   5488506 AG-----TCAG
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 42932  6 -     43706 AG-----TTTG
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                         24787  6 +    224448 AG-----CATG
i Xerus_inauris.XerIna_scaffold_2302                     I 3 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         29987  6 +     86975 AG-----TTCA
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      39073  6 +     63895 AG-----AACT
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21812  6 -     22999 AG-----TTCA
i Ziphius_cavirostris.ZipCav_flattened_line_16896        C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_207869               7022  0 -      9651 C
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I

a score=0.000000
s hg38.chrUn_KI270755v1                                      11300 37 +     36723 CTGCTTTGTG----T-GCAGCTCTCTCCA-A--GTGT--G--GA--AGAGC
s Acinonyx_jubatus.LLWD01001279.1                           836835 37 +   1699592 CTGTTTTCTG----G-GGAGCTCACTCCA-A--CCAT--GGAAA--AG--T
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     10843 30 -     63021 CTGCTTTCTG----GACCGGTTCATTCCA-T--CCAC--------------
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 I 5
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538517 37 -  29979442 CTGATTCCTG----G-GCAGCTCACTCCA-A--CCAT--GGAAA--AG--C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            107970 26 -    347723 ----------------GCAGCTCATTCCA-A--CCAT--GGAAA--AG--C
i Ailurus_fulgens.LNAC01001112.1                         I 10 C 0
s Allactaga_bullata.AllBul_scaffold_20030                     1533 34 +     61208 TTGCCTTCTG----G---ATCTCAT-CTG-G--TGAT--G--GT--AGAAC
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   40869 17 -     52922 ------------------AGCTCACTCCA-A--GGGT--G-----------
i Allenopithecus_nigroviridis.k141_3361533               I 5 C 0
s Allochrocebus_lhoesti.k141_1932296                          7187 30 +     11307 TTGCTCTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Allochrocebus_lhoesti.k141_1932296                     I 1 C 0
s Allochrocebus_preussi.k141_499905                           7359 30 -     13300 CTGCTCTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Allochrocebus_preussi.k141_499905                      I 1 C 0
s Allochrocebus_solatus.k141_139760                           9240 30 +     12926 CTGCCCTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Allochrocebus_solatus.k141_139760                      I 1 C 0
s Alouatta_belzebul.k141_3560514                             31905 37 +     51355 CTGCTTTGTG----A-GCAGTTCACTCCA-A--GTAT--G--GA--AGAGC
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               25051 37 -     36483 CTGCTTTGTG----A-GCAGTTCACTCCA-A--GTGT--G--GA--AGAGC
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              7156 37 -     13496 CTGCTTTGTG----A-GCAGTTCACTCCA-A--GTAT--G--GA--AGAGC
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23938 37 +     27940 CTGCTTTGTG----A-GCAGTTCACTCCA-A--GTGT--G--GA--AGAGC
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15746 37 -     39310 CTGCTTTGTG----A-GCAGTTCACTCCA-A--GTGT--G--GA--AGAGC
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            24004 37 +     30492 CTGCTTTGTG----A-GCAGTTCACTCCA-A--GTGT--G--GA--AGAGC
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28238  6 +     47717 -------------------------------------------A--AGAGC
i Alouatta_palliata.k141_2135620                         I 3 C 0
s Alouatta_puruensis.k141_2029433                            79207 37 +     87306 CTGCTTTGTG----A-GCAGTTCACTCCA-A--GTGT--G--GA--AGAGC
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             39189 37 +     50774 CTGCTTTGTG----A-GCAGTTCACTCCA-A--GTGT--G--GA--AGAGC
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707922 37 -   2318259 TTGCTTTCTG----G-GCAGTTCATTATA-A--CCCT--GGAAA--AG--C
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      209510 37 +    412891 TTGCTTTCTG----G-GCAGCTTATTCTT-ACTGTGG--A--AA--AG--C
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303             27151 37 -     32520 TTGCTTTCTG----G-GCAGTTCATTATA-A--CCCT--GGAAG--AG--C
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_2596348                                   5436 37 +     12024 CTGCTTTGTT----A-GCAGTTCACTCCA-A--GTGT--G--GA--AGAGC
i Aotus_azarae.k141_2596348                              C 0 C 0
s Aotus_griseimembra.k141_2227177                             5103 37 -     10972 CTGCTTTGTT----A-GCAGTTCGCTCCA-A--GTGT--G--GA--AGAGC
i Aotus_griseimembra.k141_2227177                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4333564 37 -   5030052 CTGCTTTGTT----A-GCAGTTCACTCCA-A--GTGT--G--GA--AGAGC
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_1801223                              5496 37 -     12698 CTGCTTTGTT----A-GCAGTTCGCTCCA-A--GTGT--G--GA--AGAGC
i Aotus_trivirgatus.k141_1801223                         C 0 C 0
s Aotus_vociferans.k141_506037                                4956 37 -     11998 CTGCTTTGTT----A-GCAGTTCGCTCCA-A--GTGT--G--GA--AGAGC
i Aotus_vociferans.k141_506037                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22348 37 +     39421 CTACCTTCTG----G-GAAGATCGTTTCA-G--CTGG--G--GA--AGAGC
i Aplodontia_rufa.AprRuf_scaffold_37633                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       14444 11 +     45910 ----------------------------------TTT--A--GA--AGAGC
i Arctocebus_calabarensis.k141_1364444                   I 6 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                 26960 37 +     43469 CTGCTTTCTG----G-GCAGCTTATTCTT-ACTGTGG--A--GA--AG--C
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21232200 37 -  21539123 CTGCTTTGTG----A-GCAGTTCACTCCA-A--GTGT--G--GA--AGAGC
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3272 37 -     48076 CTGCTTTGTG----A-GCAGTTCACTCCA-A--GTGT--G--GA--AGAGC
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18738 37 -     22344 CTGCTTTGTG----A-GCAGTTCACTCCA-A--GTGT--G--GA--AGAGC
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31794 37 -     89868 CTGCTTTGTG----A-GCAGTTCACTCCA-A--GTGT--G--GA--AGAGC
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36207 37 -     40414 CTGCTTTGTG----A-GCAGTTCACTCCA-A--GTGT--G--GA--AGAGC
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                44041 37 +     72325 CTGCTTTGTG----A-GCAGCTCACTCCA-A--GTGT--G--GA--AGAGC
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75804 37 -     92717 CTGCTTTGGG----G-GCAGCTCATTCCA-C--CTGT--G--AA--AGAGC
i Avahi_laniger.k141_765380                              C 0 C 0
s Avahi_peyrierasi.k141_1424874                              76387 37 +     85213 CTGCTTTGGG----G-GCAGCTCATTCCA-C--CTGT--G--AA--AGAGC
i Avahi_peyrierasi.k141_1424874                          C 0 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222583 37 +  23207421 TTGCCTTCTG----G-GCAGCTCATTATA-A--CCCT--GGAAG--AG--C
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4586 37 +     25979 TTGCCTTCTG----G-GCAGCTCATTATA-G--ACCT--GGAAG--AG--C
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     12980 37 -    124022 TTGCTTTCTG----G-GCAGTTCATTATA-A--CCCT--GGAAA--AG--C
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                    233158 37 -    288883 TTGCTTTCTG----G-GCAATTCATTATA-A--CCCT--GGAAA--AG--C
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20306533 37 +  48749331 TTGCTTTCTG----G-GCAATTCATTATA-A--CCCT--GGAAA--AG--C
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1159635 37 -   1948126 TTGCTTTCTG----G-GCAATTCATTATA-A--CCCT--GGAAA--AG--C
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18116745 37 +  45695690 TTGCTTTCTG----G-GCAATTCATTATA-A--CCCT--GGAAA--AG--C
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2852200 37 +   4408762 TTGCTTTCTG----G-GCAATTCATTATA-A--CCCT--GGAAA--AG--C
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                117063 37 -    122966 CTGCTTTGTG----G-GAAGTTCGCTCCA-A--GTGT--G--GA--AGGGC
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76541 37 +     81800 CTGCTTTGTG----G-GAAGTTCGCTCCA-A--GTGT--G--GA--AGGGC
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45746 37 -     95584 CTGCTTTGTG----G-GAAGTTCGCTCCA-A--GTGT--G--GA--AGGGC
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69841 37 -    119600 CTGCTTTGTG----G-GAAGTTCGCTCCA-A--GTGT--G--GA--AGGGC
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020569 37 -  17673402 TTGCTTTCTG----G-GCAGCTCATTACA-A--CCCT--GGAAG--AG--C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2353399 37 -   7040546 TTGCTTTCTG----G-GCAGCTCATTACA-A--CCCT--GGAAG--AG--C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  421658 37 -   1652518 TTGCTTTCTG----G-GCAGCTCATTACA-A--CCCT--GGAAG--AG--C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17831861 37 -  60362399 CTGTTTTCTG----G-GCAGCTCACTTCA-G--CCAT--GGAAA--AG--C
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32605 37 -     43241 CTGTTTTCTG----G-GCAGCTCACTTCA-G--CCAT--GGAAA--AG--C
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067329 37 -   9314153 CTGTTTTCTG----G-GCAGCTCACTTCA-G--CCAT--GGAAA--AG--C
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17991988 37 -  59632846 CTGTTTTCTG----G-GCAGCTCACTTCA-G--CCAT--GGAAA--AG--C
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18533094 37 +  63665305 CTGTTTTCTG----G-GCAGCTCACTTCA-G--CCAT--GGAAA--AG--C
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18861985 37 +  46296322 TTGCTTTCTG----G-GCAGTTCATTATA-A--CCCT--GGAAA--AG--C
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18092695 37 -  44709034 TTGCTTTCTG----G-GCAGTTCATTATA-A--CCCT--GGAAA--AG--C
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_118970                   7420 33 -      8274 CTACTTTCTA----A-GCAGTGCATTACA-G--CTAT--G--AA--A----
i Capromys_pilorides.CapPil_scaffold_118970              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           180019 36 -    496798 CTGCTGT-TG----G-GAGGCCCATTTTA-A--CTGC--A--GA--AGAGC
i Carlito_syrichta.NW_007259797.1                        I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_737331                435 37 -       918 CTGCTTTCTG----G-GCAGCGTATTCTT-ACTGTGG--A--AG--AG--C
i Carollia_perspicillata.CarPer_scaffold_737331          I 7 C 0
s Castor_canadensis.CasCan_scaffold_2074                    167244 37 +    179628 CTCCTTTTTG----G-GTAGCTCATTCCA-G--CCAT--G--GA--AGAGC
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                    113805 37 +    217609 CTGCTTTCTG----G-GCAGCTCATTATA-A--CTGT--GGAAG--AG--C
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18367667 37 -  23392119 NNNNNNNNNN----N-NNNNNNNNNNNNN-N--NNNN--N--NA--AGAGA
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18379932 37 -  23407841 CTCCTGTCTA----A-GCAGCTCACTCCA-G--CTAT--G--GA--AGAGA
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       118775 37 +    143979 CTCCTGTCTA----A-GCAGCTCACTCCA-G--CTAT--G--GA--AGAGA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebus_albifrons.Contig27                                25675685 37 +  26074798 CTGCTTTGTG----A-GCAGTTCGCTCCA-A--GTGT--G--GA--AGAGC
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               22153 37 +     28840 CTGCTTTGTG----A-GCAGTTCGCTCCA-A--GTGT--G--GA--AGAGC
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7824 37 +     13997 CTGCTTTGTG----A-GCAGTTCGCTCCA-A--GTGT--G--GA--AGAGC
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29943 36 +     31688 CTGCTGT-TG----G-GAGGCCCATTTTA-A--CTGC--A--GA--AGAGC
i Cephalopachus_bancanus.k141_1423433                    I 1 C 0
s Ceratotherium_simum.JH767749.1                          12257353 37 +  27778364 CTGCTCTCTG----G-GCAGCTCATTCCA-A--CTGT--GGAAG--AG--C
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          3060 37 +     15641 CTGCTCTCTG----G-GCAGCTCATTCCA-A--CTGT--GGAAG--AG--C
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4501836 30 +   4669795 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Cercocebus_atys.KQ010504.1                             I 1 C 0
s Cercocebus_chrysogaster.k141_2766003                       23108 30 -     30935 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Cercocebus_chrysogaster.k141_2766003                   I 1 C 0
s Cercocebus_lunulatus.k141_245046                            7510 30 +     18174 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Cercocebus_lunulatus.k141_245046                       I 1 C 0
s Cercocebus_torquatus.k141_4063387                           7347 30 +     18249 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Cercocebus_torquatus.k141_4063387                      I 1 C 0
s Cercopithecus_ascanius.k141_4281816                         2469 30 -      5884 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Cercopithecus_ascanius.k141_4281816                    I 1 C 0
s Cercopithecus_cephus.k141_1630443                           1493 30 +      4620 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Cercopithecus_cephus.k141_1630443                      I 1 C 0
s Cercopithecus_diana.k141_488174                             7929 30 +     10982 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Cercopithecus_diana.k141_488174                        I 1 C 0
s Cercopithecus_hamlyni.k141_1302205                          1475 30 +      4810 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Cercopithecus_hamlyni.k141_1302205                     I 1 C 0
s Cercopithecus_lowei.k141_4082698                            7391 30 +     34178 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Cercopithecus_lowei.k141_4082698                       I 1 C 0
s Cercopithecus_albogularis.ctg5                                38849501 30 +  39242232 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Cercopithecus_albogularis.ctg5                               I 1 C 0
s Cercopithecus_mona.ctg39                                21256294 30 -  21565898 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Cercopithecus_mona.ctg39                               I 1 C 0
s Cercopithecus_neglectus.k141_557928                         7557 30 -     18401 CTGCTTTGTG----G-GCAGCTCACTCCA-G--GTGT--G-----------
i Cercopithecus_neglectus.k141_557928                    I 1 C 0
s Cercopithecus_nictitans.k141_1200139                        7620 30 -     15013 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Cercopithecus_nictitans.k141_1200139                   I 1 C 0
s Cercopithecus_petaurista.k141_365908                        7591 30 +     11214 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Cercopithecus_petaurista.k141_365908                   I 1 C 0
s Cercopithecus_pogonias.k141_391400                          2411 30 -     13831 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Cercopithecus_pogonias.k141_391400                     I 1 C 0
s Cercopithecus_roloway.k141_1248991                         27585 30 +     68532 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Cercopithecus_roloway.k141_1248991                     I 1 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             644 26 -      1897 --GCTTTCTG----G-GCAGCTCGTTGCA-A--ATG---------------
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       I 4 I 6
s Cheirogaleus_major.k141_333249                             43795 37 -     52598 CTACTTTGGG----G-GAAGCTCATTCCA-C--CTGT--G--AA--AGAGC
i Cheirogaleus_major.k141_333249                         C 0 C 0
s Cheirogaleus_medius.k141_1055463                           39126 37 +     57038 CTACTTTGGG----G-GCAGCTCATTCCA-C--CTGT--G--AA--AGAGC
i Cheirogaleus_medius.k141_1055463                       C 0 C 0
s Cheracebus_lucifer.k141_49986                               9960 36 -     17098 CTGCTTTGTG----G-GAAGTTCGCTCCA-A--GTGT--G--CA--CG-GC
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9830 36 +     17877 CTGCTTTGTG----G-GAAGTTCGCTTCA-A--GTGT--G--CA--CG-GC
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167397 36 -    216457 CTGCTTTGTG----G-GAAGTTCGCTCCA-A--GTGT--G--CA--CG-GC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71870 36 +     76511 CTGCTTTGTG----G-GAAGTTCGCTCCA-A--GTGT--G--CA--CG-GC
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1276209 32 +   2543920 CTGCTTTCTA----A-GCAGCTCATTCCA-G--CTAT--G--GA-------
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                          114088 37 +    146308 CTGCTTTGTG----G-GAAGTTCGCTCCA-A--GTGT--G--GA--AGGGC
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          45996 37 -     50570 CTGCTTTGTG----G-GAAGTTCGCTCCA-A--GTGT--G--GA--AGGGC
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455369 30 -  18827391 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Chlorocebus_aethiops.ctg25                             I 1 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41312 30 -     50209 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Chlorocebus_pygerythrus.k141_1025673                   I 1 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448294 30 + 135778131 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Chlorocebus_sabaeus.CM001947.1                         I 1 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   937 36 -     25429 CTGCTTTCTG----G-GCAGCTCATGGCA-A--TTTA--G--GA--AGA-T
i Choloepus_didactylus.ChoDid_scaffold_22546             I 2 C 0
s Choloepus_hoffmanni.KN194906.1                            196068 36 +    839153 ctGCTTTCTG----G-GCAGCTCATGGCA-A--TTTA--G--GA--AGA-T
i Choloepus_hoffmanni.KN194906.1                         I 2 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               7022 29 -      9651 -------CTG----T-GTAACTCATTCA--A--ATAC--G--GA--AGGAC
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          C 0 C 0
s Colobus_angolensis.KN981557.1                            1936236 30 +   2368649 CTGCTTTGCG----G-GCAGCTCACTCCA-C--GTGT--G-----------
i Colobus_angolensis.KN981557.1                          I 1 C 0
s Colobus_guereza.LG01                                   199970214 30 + 200372422 CTGCTTTGCG----G-GCAGCTCACTCCA-C--GTGT--G-----------
i Colobus_guereza.LG01                                   I 1 C 0
s Colobus_polykomos.k141_906115                              58528 30 +     84244 CTGCTTTGCC----G-GCAGCTCACTCCA-C--GTGT--G-----------
i Colobus_polykomos.k141_906115                          I 1 C 0
s Condylura_cristata.JH655891.1                           17566982 35 -  53390261 TTGATT--TG----G-GTCACTCATTCCA-G--CCATGGA--AA--GG--C
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_153350           137 22 +      5041 CTGTTTTCTG----G-GCAGTTCATGC------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_153350     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 16754 30 +     83289 CTGCTTTCTG----GACCAACTCATTCCA-G--CCAC--------------
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 I 5
s Cricetulus_griseus.LT883664.1                           11697381 30 + 224834208 CAACTTTCTG----GACCAGCTCATTCCC-G--CCGC--------------
i Cricetulus_griseus.LT883664.1                          C 0 I 5
s Crocidura_indochinensis.CroInd_scaffold_522851               144 23 +      2245 CCACTTTCCA----T-TCAGTTTATCAT-----------------------
i Crocidura_indochinensis.CroInd_scaffold_522851         C 0 I 10
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59541 37 -     87169 CTGCTTTCTG----G-GCATCTCACTCCA-A--CCAT--GGAAA--AG--T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    859981 37 +   1526836 CTGCTTTCTG----A-GCAATCCGTTCTG-G--CTTT--G--GC--AGAGC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   6446 37 -     50838 CTACTTTCTA----A-GCAGTACATTACA-G--TTAT--G--GA--AGAGA
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_167855                 1741 37 +      7355 CTGCTTTCTA----A-GCAGCTCATTCCA-G--CTAT--A--GA--AAAGA
i Cuniculus_paca.CunPac_flattened_line_167855            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            19059 37 -     75252 CTGCTCTCTA----A-GCAGCTCATTCCA-G--CCAT--G--GA--AGAGA
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            93177 28 +   2246927 CCATTTGCTG----T-GCGGCTCCTTGCA-A--ATG---------------
i Dasypus_novemcinctus.JH564415.1                        I 755 I 6
s Daubentonia_madagascariensis.ctg71                      12562554 37 -  12879189 CTGCTTCTGG----G-GCAGTTCATTCCA-C--CTGC--G--AA--AGAGC
i Daubentonia_madagascariensis.ctg71                     C 0 C 0
s Delphinapterus_leucas.KZ290073.1                        16841734 37 +  35494412 TTGCCTTCTG----G-GCAGCTCATTATA-A--TCCT--GGAAG--AG--C
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8650451 37 +  20541912 CTGCTTTCTG----G-GCAGCTTATTCTT-ACTGTGG--A--AA--AG--C
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  699148 37 +   1390856 CTGCTCTCTG----G-GCAGCTCATTCCA-A--CTGT--GGAAG--AG--C
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                   31951 37 +    198055 CTGCTCTCTG----G-GCAGCTCATTCCA-A--CTGT--GGAAG--AG--C
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    59945 37 +     67921 CTGCTTTCTA----A-GCAGCTCATTCCA-G--CTAT--G--GA--AGAGA
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18914766 36 +  37912305 TTACTTTGGG----G-GCAGCTTATTCCA-G--T-AA--G--TA--AGAGA
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_47531                  13364 36 -     26976 TTACTTTGGG----G-GTAGCTTATTCCA-G--T-AA--G--TA--AGAGA
i Dipodomys_stephensi.DipSte_scaffold_47531              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_260697                 1681 37 +      2313 TGGCTTTCTA----A-GCAGCTCATTCCA-G--CTAT--G--GA--AGAGA
i Dolichotis_patagonum.DolPat_scaffold_260697            C 0 C 0
s Eidolon_helvum.KE797349.1                                  19354 37 -     31197 TTGCTTTCTG----G-ACAGCTCATTCTA-A--CCAT--G--GAAGAG--c
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       342158 37 +    607251 TTGCTTTCTA----G-GCAGTTCATTATA-A--CACT--GGAAG--AG--C
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          47773 30 -    110024 CTGATTTCTG----GACTAGTCCAATCCT-G--CCAC--------------
i Ellobius_lutescens.LOEQ01008920.1                      C 0 I 5
s Ellobius_talpinus.LOJH01050844.1                            9024 30 +     12610 CTCATTTCTG----GACTAGCCCAATCCA-G--CCAC--------------
i Ellobius_talpinus.LOJH01050844.1                       C 0 I 5
s Enhydra_lutris.KZ291758.1                               16365858 37 -  41312741 CTGCTTCCCG----G-GAAGCTCATTCCA-A--CCAT--GCAAA--AG--C
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1310472 37 +   4378816 CTGCTCTCTG----G-GCAGCTCATTCCC-A--CCAT--GGAAG--AG--C
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18557941 37 -  39960074 CTGCTCTCTG----G-GCAGCTCATTCCC-A--CCAT--GGAAG--AG--C
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               59982 37 +    498745 CTGCTCTCTG----G-GCAGCTCATTCCC-A--CCAT--GGAAG--AG--C
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3365510 35 -   7059049 CTACTTTCTG----G-GCAGCCCATCACA-A--TTAT--G--GA--AG--A
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21237575 30 -  21539334 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Erythrocebus_patas.Contig38                            I 1 C 0
s Eschrichtius_robustus.EscRob_flattened_line_8968           40907 37 +    133382 TTGCCTTCTG----G-GCAGCTCATTATA-A--CCCT--GGAAG--AG--C
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5209 37 -     25849 TTGCCTTCTG----G-GCAGCTCATTATA-A--CCCT--GGAAG--AG--C
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_1869827                             12914 37 -     21348 CTGCTTTGGG----G-GCAGCTCATTCCA-C--CTGA--G--AA--AGAGC
i Eulemur_albifrons.k141_1869827                         C 0 C 0
s Eulemur_collaris.k141_601111                               10114 37 +     70999 CTGCTTTGGG----G-GCAGCTCATTCCA-C--CTGA--G--AA--AGAGC
i Eulemur_collaris.k141_601111                           C 0 C 0
s Eulemur_coronatus.k141_384460                               7853 37 -    112731 CTGCTTTGGG----G-GCAGCTCATTCCA-C--CTGC--G--AA--AGAGC
i Eulemur_coronatus.k141_384460                          C 0 C 0
s Eulemur_flavifrons.k141_433119                              6863 37 -     68309 CTGCTTTGGG----G-GCAGCTCATTCCA-C--CTGC--G--AA--AGAGC
i Eulemur_flavifrons.k141_433119                         C 0 C 0
s Eulemur_fulvus.k141_2627385                                 3999 37 -      9374 CTGCTTTGGG----G-GCAGCTCATTCCA-C--CTGA--G--AA--AGAGC
i Eulemur_fulvus.k141_2627385                            C 0 C 0
s Eulemur_macaco.k141_1562045                                33094 37 +     75513 CTGCTTTGGG----G-GCAGTTCATTCCA-C--CTGC--G--AA--AGAGC
i Eulemur_macaco.k141_1562045                            C 0 C 0
s Eulemur_mongoz.k141_232305                                 30979 37 +     97555 CTGCTTTGGG----G-GCAGTTCATTCCA-C--CTGC--G--AA--AGAGC
i Eulemur_mongoz.k141_232305                             C 0 C 0
s Eulemur_rubriventer.k141_1423786                            7634 37 -     30972 CTGCTTTGGG----G-GCAGCTCATTCCA-C--CTGC--G--AA--AGAGC
i Eulemur_rubriventer.k141_1423786                       C 0 C 0
s Eulemur_rufus.k141_1120150                                  7511 37 +     16616 CTGCTTTGGG----G-GCAGCTCATTCCA-C--CTGA--G--AA--AGAGC
i Eulemur_rufus.k141_1120150                             C 0 C 0
s Eulemur_sanfordi.k141_1122526                              34098 37 +    111500 CTGCTTTGGG----G-GCAGCTCATTCCA-C--CTGA--G--AA--AGAGC
i Eulemur_sanfordi.k141_1122526                          C 0 C 0
s Felis_catus.CM001381.2                                  20267976 37 + 206538554 CTGTTTTCTG----G-GCAGCTCACTCCA-A--CCAT--GGAAA--AG--T
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20226758 37 + 205367284 CTGTTTTCTG----G-GCAGCTCACTCCA-A--CCAT--GGAAA--AG--T
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  3784 37 -     25330 CTGTTTTCTG----G-GCAGCTCACTCCA-A--CCAT--GGAAA--AG--T
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                             872397 33 +   3816255 TAGC----TA----A-GTAGCTCATTCTA-A--CTAT--G--GA--AGTGA
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                        929 11 +    137831 ----------------------------------TTT--A--GA--AGAGC
i Galago_moholi.ctg3793                                  I 6 C 0
s Galago_senegalensis.k141_991736                             2045 11 -     22493 ----------------------------------TTT--A--GA--AGAGC
i Galago_senegalensis.k141_991736                        I 6 C 0
s Galagoides_demidoff.k141_561628                              166 11 +     32986 ----------------------------------TTT--A--GA--AGAGC
i Galagoides_demidoff.k141_561628                        I 6 C 0
s Galeopterus_variegatus.GalVar_scaffold_75343               15985 37 -     17176 CTAGTTTGGG----G-GAAGCTTGTTCCA-A--CTGT--G--GA--AGAGC
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     637015 37 -    660261 TTGCTTTCTG----G-GCAGTTCATTATA-A--CCCT--GGAAG--AG--C
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_149316                            5332 37 +      8016 CTGCCTCCTG----G-GTGGCTCATTCTA-G--CAGT--G--GA--AGAGC
i Glis_glis.GliGli_scaffold_149316                       C 0 C 0
s Gorilla_gorilla.LT578341.1                             186365181 37 + 186649187 CTGCTTTGTG----T-GCAGCTCTCTCCA-A--GTGT--G--GA--AGAAC
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   55087 37 +     78134 CTGCCTCCTG----G-GCAGTTCATTCTA-G--CAGT--G--GA--AGAGC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                           7508 37 +     40692 CTGCTTTGAG----G-GCAGCTCATTCCA-C--CTGC--G--AA--AGAGC
i Hapalemur_alaotrensis.k141_330369                      C 0 C 0
s Hapalemur_gilberti.k141_435261                             17196 37 +     22537 CTGCTTTGAG----G-GCAGCTCATTCCA-C--CTGT--G--AA--AGAGC
i Hapalemur_gilberti.k141_435261                         C 0 C 0
s Hapalemur_griseus.k141_679418                              15843 37 -     28566 CTGCTTTGAG----G-GCAGCTCATTCCA-C--CTGT--G--AA--AGAGC
i Hapalemur_griseus.k141_679418                          C 0 C 0
s Hapalemur_meridionalis.k141_258450                         14575 37 +     42923 CTGCTTTGAG----G-GCAGCTCATTCCA-C--CTGC--G--AA--AGAGC
i Hapalemur_meridionalis.k141_258450                     C 0 C 0
s Hapalemur_occidentalis.k141_578367                         17830 37 +     53142 CTGCTTTGAG----G-GCAGCTCATTCCA-C--CTGC--G--AA--AGAGC
i Hapalemur_occidentalis.k141_578367                     C 0 C 0
s Helogale_parvula.HelPar_flattened_line_2585               273230 37 +    327341 CTGCTTCCTG----G-GCATCTCACTCCA-A--CCAT--GGAAA--TG--T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14705 37 -     48891 TTGCTTTCTG----G-GAAGTTCATTATA-A--CCCT--GGAAA--AG--C
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20686846 35 +  22651954 AGGCTTTCTA----A-GCAACCCTTTTCA-A--CTAT--G--GA--AG--A
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10368 36 -     15841 CTGCTTTCTG----G-GCAGCG-TCTCTA-A--CTGT--G--TA--AGCAT
i Heterohyrax_brucei.HetBruBak_scaffold_90013            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6608 37 +     36432 TTGCCTTCTG----G-GCAGCTCATTATA-A--CCCT--GGAAG--AG--C
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       132227 37 +   1711038 atgCTTTCTG----G-ACAGCTCAGTCTA-A--TCAT--G--GAAGAG--C
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_65612                9140 37 -     20285 TTGCTTTCTG----G-ACAGTTCATTCTA-A--TCAT--G--GAAGAG--C
i Hipposideros_galeritus.HipGal_scaffold_65612           C 0 C 0
s Hoolock_leuconedys.ctg274                                    460600 37 +    630532 CCGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G--GA--AGAGC
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   9104 37 -     22022 CTTTTTTCTG----G-GCAGCTCTCTCCA-A--CCAT--GGAAA--AG--T
i Hyaena_hyaena.HyaHya_flattened_line_62789              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            43341 37 -    143317 CTGCTTTCTA----A-GCAGCTCATTCCA-G--CTAT--G--GA--AGAAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_967383                                1869 37 -      4846 CCGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G--GA--AGAGC
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                327 37 -      8919 CCGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G--GA--AGAGC
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555298 37 - 191637585 CCGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G--GA--AGAGC
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3348185 37 -  11177569 CCGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G--GA--AGAGC
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                     101344 22 +    135385 CTTCTTTCTA----A-ACAGCTTGTTC------------------------
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 I 12
s Ictidomys_tridecemlineatus.JH393364.1                    7543904 21 -   7955117 CTACC-TCTG----T-GCAGTCTGTTC------------------------
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 I 12
s Indri_indri.k141_1997670                                    2335 36 +      8453 TTGCTTTG-G----G-GCAGCTCATTCCA-C--CTGT--G--AA--AGAGC
i Indri_indri.k141_1997670                               C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29326 37 -     31341 TTGCTTTCTG----G-GAAGCTCATTATA-A--CCCT--GGAAG--AG--C
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8298790 34 -   9596543 CTGCTTTCTG----G---ATCTCAT-CTG-G--AGAT--G--GT--ACAGC
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                  5077 37 +     97402 TTGCCTTCTG----G-GCAGCTCACTATA-A--CCCT--GGAAG--AG--C
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         33271 37 -     38430 CTGCTTTGTG----A-GCAGTTCACTCCA-A--GTGT--G--GA--GGAGC
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544496 37 -  30322482 CTGCTTTGAG----G-GCAGCTCATTCCA-C--CTGC--G--AA--AGAGC
i Lemur_catta.scaffold_24                                C 0 C 0
s Lepilemur_ankaranensis.k141_2922                            8880 37 -     24677 CTGCTTTGGG----G-GCAGCTCATTCCA-C--CTGC--G--AA--AGAGC
i Lepilemur_ankaranensis.k141_2922                       C 0 C 0
s Lepilemur_dorsalis.k141_387009                              4849 37 -     31569 CTGCTTTGGG----G-GCAGCTCACTCCA-C--CTGC--G--AA--AGAGC
i Lepilemur_dorsalis.k141_387009                         C 0 C 0
s Lepilemur_ruficaudatus.k141_121139                         22911 37 +     25010 CTGCTTTGGG----G-GCAGCTCATTCCA-C--CTGT--G--AA--AGAGC
i Lepilemur_ruficaudatus.k141_121139                     C 0 C 0
s Lepilemur_septentrionalis.k141_185316                      48465 37 +     54090 CTGCTTTGGG----G-GCAGCTCATTCCA-C--CTGC--G--AA--AGAGC
i Lepilemur_septentrionalis.k141_185316                  C 0 C 0
s Leptonychotes_weddellii.KB714746.1                       3074579 37 +   3914936 CTGCTTCCTG----G-GCAGCTCACTCCA-A--CCAT--GGAAA--AG--C
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_57262                     13010 37 -     23961 TAGCTTATGG----C-ACCATCTGTTGCA-G--CTGT--G--GA--AGAGC
i Lepus_americanus.LepAme_scaffold_57262                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             299243 37 -    662738 TTGCCTTCTG----G-GCAGCTCATTATA-A--CTAT--GGAAG--AG--C
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1464828 30 +   1826925 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Lophocebus_aterrimus.ctg367                            I 1 C 0
s Loris_lydekkerianus.k141_2958567                            3937 11 -     22734 ----------------------------------TTT--A--GA--AGAGC
i Loris_lydekkerianus.k141_2958567                       I 6 C 0
s Loris_tardigradus.ctg83                                  1061365 11 +   6120653 ----------------------------------TTT--A--GA--AGAGC
i Loris_tardigradus.ctg83                                I 6 C 0
s Lycaon_pictus.CM007581.1                                17988228 37 -  59628241 CTGTTTTCTG----G-GCAGCTCACTTCA-G--CCAT--GGAAA--AG--C
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              33088 30 +     40492 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Macaca_arctoides.k141_2326796                          I 1 C 0
s Macaca_assamensis.Contig5                               59703013 30 +  60120075 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Macaca_assamensis.Contig5                              I 1 C 0
s Macaca_cyclopis.k119_794849                                 7207 30 +      8714 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Macaca_cyclopis.k119_794849                            I 1 C 0
s Macaca_fascicularis.k141_814140                           107641 30 -    114318 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Macaca_fascicularis.k141_814140                        I 1 C 0
s Macaca_fuscata.k119_943731                                  7452 30 +     13165 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Macaca_fuscata.k119_943731                             I 1 C 0
s Macaca_leonina.k141_2438370                                12825 30 -     14632 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Macaca_leonina.k141_2438370                            I 1 C 0
s Macaca_maura.k141_515834                                   12983 30 +     14712 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Macaca_maura.k141_515834                               I 1 C 0
s Macaca_mulatta.NC_041758.1                             186867022 30 + 187317192 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Macaca_mulatta.NC_041758.1                             I 1 C 0
s Macaca_nemestrina.KQ007038.1                            25492137 30 -  25927173 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Macaca_nemestrina.KQ007038.1                           I 1 C 0
s Macaca_nigra.k141_128247                                   20453 30 +     98240 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Macaca_nigra.k141_128247                               I 1 C 0
s Macaca_radiata.k141_3254723                                 5995 30 +     10028 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Macaca_radiata.k141_3254723                            I 1 C 0
s Macaca_siberu.k141_1929020                                  7247 30 -      9047 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Macaca_siberu.k141_1929020                             I 1 C 0
s Macaca_silenus.Contig273                                  358256 30 -    668171 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Macaca_silenus.Contig273                               I 1 C 0
s Macaca_thibetana.k99_596453                                 1628 30 -      5469 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Macaca_thibetana.k99_596453                            I 1 C 0
s Macaca_tonkeana.k141_683787                                 7466 30 +      9199 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Macaca_tonkeana.k141_683787                            I 1 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                 24134 37 +    270270 TTGCTTTCTG----G-ACAGCTCATTCTA-A--CCAT--G--GAAGAG--T
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961904 30 -  24302211 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Mandrillus_leucophaeus.scaffold280                     I 1 C 0
s Mandrillus_sphinx.Contig270                               377657 30 +    752769 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Mandrillus_sphinx.Contig270                            I 1 C 0
s Manis_javanica.JSZB01003497.1                              40320 37 +    737560 ctgctttctg----g-gcagctcattcca-A--CCAC--GGAAG--AG--C
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              72490 37 -    317179 CTGCATTCTG----G-GCAGCTCGTTCCA-A--CCAC--GGAAG--AG--C
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33124968 21 -  40650429 CTACC-TCTG----T-GCAGTCTGTTC------------------------
i Marmota_marmota.CZRN01000018.1                         C 0 I 12
s Megaderma_lyra.MegLyr_scaffold_4542                        36026 37 -    207569 CCGCTTTCCA----G-ACCGCTCATTCTC-A--CCGT--G--CAGGAA--C
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23397 36 +     74585 CTGCTTCCCG----G-GAAGCTCAT-CCA-A--CCAT--GCAAA--AG--C
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 66174 30 +    140813 CTGCTTTCTG----AACTACCTCATTCCA-G--CTGC--------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 5
s Mesocricetus_auratus.KB708134.1                         12212485 30 -  29670104 CAACTTTCTG----GACCAGCTCTTTCCA-G--CCAC--------------
i Mesocricetus_auratus.KB708134.1                        C 0 I 5
s Mesoplodon_bidens.MesBid_scaffold_74495                     5052 37 -     19186 TTGCCTTCTG----G-GCAGCTCATTATA-A--CCCT--GGAAG--AG--C
i Mesoplodon_bidens.MesBid_scaffold_74495                C 0 C 0
s Microcebus_murinus.CM007674.1                           18313466 37 -  93316391 CTGCTTTGGG----G-GCAGCTCATTCCA-G--CTGT--G--AA--AGAGC
i Microcebus_murinus.CM007674.1                          C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_39861                18909 37 -     30105 CTGCTTTCTG----G-GCAGCTTATTCTT-ACTGTGG--A--AA--AG--T
i Micronycteris_hirsuta.MicHir_scaffold_39861            C 0 C 0
s Miopithecus_ogouensis.k141_791330                           1778 30 -     13566 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Miopithecus_ogouensis.k141_791330                      I 1 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        25018 37 +     26817 CTGCTTCCTG----G-GCAGCTCACTCCA-A--CCAT--GGAAA--AG--C
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    56980 37 -    437263 TTGCCTTCTG----G-GCAGCTCATTATA-A--TCCT--GGAAG--AG--C
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 162117 37 -    366855 ctgctctcag----g-gcagcTTATTCTT-AGAGCGG--A--AA--AG--C
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32157 37 +     82753 TAGCTTTCTG----T-GCAGTTCATTATA-A--CCCT--AGAAA--AG--C
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21813 37 +     63510 CTGCTTTCTG----G-GCATCTCACTCCA-A--CCAT--GGAAA--CG--T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mus_pahari.LT608297.1                                   31390955 30 -  89631738 CTGCTTTCTG----GACCAGCTCATTCCA-G--CCAC--------------
i Mus_pahari.LT608297.1                                  C 0 I 5
s Muscardinus_avellanarius.MusAve_scaffold_74954             15639 37 -     17106 CTGACTCCTC----G-CCAGCTCATTCTA-G--CAGT--G--GA--AGAGC
i Muscardinus_avellanarius.MusAve_scaffold_74954         C 0 C 0
s Mustela_putorius.JH418006.1                               330610 37 -  14710649 CTGCTTCCCG----G-GAAGCTCATTCCA-A--CCAT--GCAAA--AG--C
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      5628 37 +     27262 CTATTTTCTA----A-GCAGAGCACTACA-G--CTAT--G--GA--AGAGA
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14359 38 -     28317 CCACTTTCCG----G-GCAGCTCATGGCAAA--TGTG--G--GA--AGACT
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          I 2 C 0
s Nasalis_larvatus.k141_970469                               18638 30 +     37058 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Nasalis_larvatus.k141_970469                           I 1 I 8
s Neomonachus_schauinslandi.NINY01007730.1                20343571 37 +  31847680 CTGCTTCCTG----G-GCAGCTCACTCCA-A--CCAT--GGAAA--AG--C
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5895032 37 +   7148211 TTGCCTTCTG----G-GCAGCTCATTATA-A--TCCT--GGAAG--AG--C
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9182118 37 -   9404916 CTGCTTTCTG----G-GCAGCTCACTTCA-G--CCAT--GGAAA--AG--C
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102653479 11 - 196305487 ----------------------------------TTT--A--GA--AGAGC
i Nycticebus_bengalensis.LG01                            I 6 C 0
s Nycticebus_coucang.k141_921975                              9621 11 +     15238 ----------------------------------TTT--A--GA--AGAGC
i Nycticebus_coucang.k141_921975                         I 6 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827968 11 + 199412804 ----------------------------------TTT--A--GA--AGAGC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       I 6 C 0
s Octodon_degus.JH651603.1                                  800349 37 +  11899542 CTACTTTCTA----A-GCAGCAAATTACA-G--CTAT--G--GA--AGAGC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              534119 37 -   2017862 CCGCTTCCTG----G-GCCGCTCACTCCA-A--CCAG--GGAAA--AG--C
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         168827 37 +    630418 TTGCTTTCTC----G-GCAGTTCATTATA-A--CCCT--GGAAG--AG--T
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107708 37 -    150152 TTGCTTTCTG----G-GCAGTTCATTATA-A--CCCT--GGAAG--AG--C
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25324 30 +    140218 CTGCTTTGTG----GACCGGCTCAATCCA-G--CCAC--------------
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 I 5
s Onychomys_torridus.OnyTor_scaffold_28377                   12495 30 +     41509 CTTCTTTCTG----GACCAGCTCTTTCCA-G--CCAC--------------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 5
s Orcinus_orca.KB316932.1                                  2812258 37 -  10937097 TTGCCTTCTG----G-GCAGCTCATTATA-A--CCCT--GCAAG--AG--C
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1888 37 -      4812 CTGCTTTCTG----G-GCTGCTCACTCTA-A--CTGT--G--GA--AGAGC
i Orycteropus_afer.OryAfe_flattened_line_327065          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190614 37 + 174332312 TAGCTTATGG----T-ACCATCTGTTGCA-G--CTGT--G--GA--AGAGC
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       495193 37 -    559221 CTGCTTTCTG----G-GCAGCTCACTTCA-G--CCAT--GGAAG--AG--C
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_187572                         4584 11 -      5557 ----------------------------------TTT--A--GA--AGAGC
i Otolemur_crassicaudatus.k141_187572                    I 6 C 0
s Otolemur_garnettii.GL873799.1                             738237 11 -   1103335 ----------------------------------TTT--A--GA--AGAGC
i Otolemur_garnettii.GL873799.1                          I 6 C 0
s Ovis_aries.CM001607.2                                   17617638 37 +  44047080 TTGCTTTCTG----G-GCAGTTCATTATA-A--CCCT--GGAAA--AG--C
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1639 37 -     13921 TTGCTTTCTG----G-GCAGTTCATTATA-A--CCCT--GGAAA--AG--C
i Ovis_canadensis.OviCan_scaffold_75879                  C 0 C 0
s Pan_paniscus.KQ411608.1                                     3490 37 +     15831 CTGCTTTGTG----T-GCAGCTCTCTCCA-A--GTGT--G--GA--AGAGC
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649304 37 + 189151597 CTGCTTTGTG----T-GCAGCTCTCTCCA-A--GTGT--G--GA--AGAGC
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  181650 37 +    230217 CTGTTTTCTG----G-GCAGCTCACTCCA-A--CCAT--GGAAA--AG--T
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                296439 37 +  18783137 CTGTTTTCTG----G-GCAGCTCACTCCA-A--CCAT--GGAAA--AG--T
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4751796 37 -   8748460 CTATTTTCTG----G-GCAGCTCACTCCA-A--CCAT--GGAAA--AG--T
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1296556 37 -   2937107 TTGCTTTCTG----G-GCAGTTCATTATA-A--CCCT--GGAAA--AG--C
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183470077 30 + 183742232 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Papio_anubis.CM001495.2                                I 1 C 0
s Papio_cynocephalus.k141_703094                              6415 30 -     17637 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Papio_cynocephalus.k141_703094                         I 1 C 0
s Papio_hamadryas.Contig39                                20592574 30 +  20919399 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Papio_hamadryas.Contig39                               I 1 C 0
s Papio_kindae.k141_1936966                                  31839 30 +     41871 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Papio_kindae.k141_1936966                              I 1 C 0
s Papio_papio.k141_2087334                                    7422 30 -     13745 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Papio_papio.k141_2087334                               I 1 C 0
s Papio_ursinus.k141_4818248                                 14922 30 +     25215 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Papio_ursinus.k141_4818248                             I 1 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42567 37 -     78924 CTGTTTTCTG----G-GCAGTTCACTCCA-A--CCAC--GGAAA--GG--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1387561                          11867 11 +     15382 ----------------------------------TTT--A--GA--AGAGC
i Perodicticus_ibeanus.k141_1387561                      I 6 C 0
s Perodicticus_potto.k141_842195                             18417 11 -     21729 ----------------------------------TTT--A--GA--AGAGC
i Perodicticus_potto.k141_842195                         I 6 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13639 34 +     28765 TTGCTTTTAG----G-GTGGCTCATTCCA-G--C-AA--A--TA--AGA--
i Perognathus_longimembris.PerPac_flattened_line_39705   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18245251 30 -  18517816 ctgCTTTCTG----GACCAGCTCATTCCA-G--CCAC--------------
i Peromyscus_maniculatus.KI615324.1                      C 0 I 5
s Petromus_typicus.PetTyp_scaffold_384010                      723 37 +       811 CTGCTTTCTA----G-GCAGTTCATTTCA-A--CTAC--A--GA--AGAGA
i Petromus_typicus.PetTyp_scaffold_384010                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              38961 37 +     63832 TTGCCTTCTG----G-GCAGCTCATTATA-A--TCCT--GGAAG--AG--C
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                           28878 30 -     55023 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Piliocolobus_badius.k141_2704958                       I 1 C 0
s Piliocolobus_gordonorum.k141_381342                        64296 30 +     89929 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Piliocolobus_gordonorum.k141_381342                    I 1 C 0
s Piliocolobus_kirkii.k141_1310104                           14387 30 -     40849 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Piliocolobus_kirkii.k141_1310104                       I 1 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326864 30 -  14605196 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Piliocolobus_tephrosceles.PDMG02000141.1               I 1 C 0
s Pithecia_albicans.k141_1476471                             19678 37 +     26961 CTGCTTTGTG----G-GAAGTTCGCTGCA-A--GTGG--G--GA--AGGGC
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15691 37 +     23417 CTGCTTTGTG----G-GAAGTTCGCTGCA-A--GTGG--G--GA--AGGGC
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19672 37 +     29694 CTGCTTTGTG----G-GAAGTTCGCTGCA-A--GTGG--G--GA--AGGGC
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44707 37 +     52772 CTGCTTTGTG----G-GAAGTTCGCTGCA-A--GTGG--G--GA--AGGGC
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19698 37 +     26198 CTGCTTTGTG----G-GAAGTTCGCTGCA-A--GTGG--G--GA--AGGGC
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3956033 37 +   4542175 CTGCTTTGTG----G-GAAGTTCGCTGCA-A--GTGG--G--GA--AGGGC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19625 37 -     23490 CTGCTTTGTG----G-GAAGTTCGCTGCA-A--GTGG--G--GA--AGGGC
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           5129 37 -      7527 TTGCCTTCTG----G-GCAGGCCATTATA-A--ACCT--GGAAG--AG--C
i Platanista_gangetica.PlaMin_flattened_line_175331      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       22397 36 -     39866 CTGCTTTGTG----G-GAAGTCTGCTCCA-A--GTGT--G--GA--CG-GC
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        31555 36 +     34906 CTGCTTTGTG----G-GAAGTCCGCTCCA-A--GTGT--G--GA--CG-GC
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       35818 36 +     87950 CTGCTTTGTG----G-GAAGTCTGCTCCA-A--GTGT--G--GA--CG-GC
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     36617 36 +     88961 CTGCTTTGTG----G-GAAGTCCGCTCCA-A--GTGT--G--GA--CG-GC
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         22310 36 +     39403 CTGCTTTGTG----G-GAAGTCCGCTCCA-A--GTGT--G--GA--CG-GC
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          36086 36 -     87928 CTGCTTTGTG----G-GAAGTCCGCTCCA-A--GTGT--G--GA--CG-GC
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         43067 36 +     60166 CTGCTTTGTG----G-GAAGTCCGCTCCA-A--GTGT--G--GA--CG-GC
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43260 36 +     67232 CTGCTTTGTG----G-GAAGTCCGCTCCA-A--GTGT--G--GA--CG-GC
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38725 36 +     90634 CTGCTTTGTG----G-GAAGTCCGCTCCA-A--GTGT--G--GA--CG-GC
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          36108 36 -     89403 CTGCTTTGTG----G-GAAGTCCGCTCCA-A--GTGT--G--GA--CG-GC
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189182086 37 + 189387572 CTGCTTTGTG----G-GCAACTCTCTCCA-A--GTGT--G--GA--AGAGC
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9596980 37 +   9816681 CTGCTTTGTG----G-GCAACTCTCTCCA-A--GTGT--G--GA--AGAGC
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              18463 30 -     69807 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Presbytis_comata.k141_1230337                          I 1 I 8
s Presbytis_mitrata.k141_584736                              11825 30 +     80239 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Presbytis_mitrata.k141_584736                          I 1 I 8
s Procavia_capensis.ProCapCap_scaffold_112514                11685 36 +     16234 CTGCTTTCTG----G-GCAGCG-TCTCTA-A--CTGC--G--GA--AGCAT
i Procavia_capensis.ProCapCap_scaffold_112514            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2617125 37 -   4620579 CTGCTTTGAG----G-GCAGCTCATTCCA-C--CTGC--G--AA--AGAGC
i Prolemur_simus.MPIZ01000396.1                          C 0 C 0
s Propithecus_coquerelli.NW_012148875.1                    1013186 37 +   2598838 CTGCTTTGGG----G-GTAGCTCATTCCA-C--CTGT--G--AA--AGAGC
i Propithecus_coquerelli.NW_012148875.1                  C 0 C 0
s Propithecus_coronatus.k141_114130                           9254 37 -     19127 CTGCTTTGGG----G-GTAGCTCATTCCA-C--CTGT--G--AA--AGAGC
i Propithecus_coronatus.k141_114130                      C 0 C 0
s Propithecus_diadema.k141_599139                            10348 37 +     10533 CTGCTTTGGG----G-GTAGCTCATTCCA-C--CTGT--G--AA--AGAGC
i Propithecus_diadema.k141_599139                        C 0 C 0
s Propithecus_edwardsi.k141_635656                             590 37 +     30655 CTGCTTTGGG----G-GTAGCTCATTCCA-C--CTGT--G--AA--AGAGC
i Propithecus_edwardsi.k141_635656                       C 0 C 0
s Propithecus_perrieri.k141_217725                            2782 37 +     14082 CTGCTTTGGG----G-GTAGCTCATTCCA-C--TTGT--G--AA--AGAGC
i Propithecus_perrieri.k141_217725                       C 0 C 0
s Propithecus_tattersalli.k141_790011                        50467 37 -     67325 CTGCTTTGGG----G-GTAGCTCATTCCA-C--CTGT--G--AA--AGAGC
i Propithecus_tattersalli.k141_790011                    C 0 C 0
s Propithecus_verreauxi.k141_1047036                          7260 37 -     35169 CTGCTTTGGG----G-GTAGCTCATTCCA-C--CTGT--G--AA--AGAGC
i Propithecus_verreauxi.k141_1047036                     C 0 C 0
s Psammomys_obesus.NESX01036367.1                            19447 30 -     31435 ctgCTTTCTG----AACCACCTCATTCCA-G--CTGC--------------
i Psammomys_obesus.NESX01036367.1                        C 0 I 5
s Pteronotus_parnellii.KE854991.1                             1674 37 -     11709 ctgctgtctg----g-gCAGCTTATTCTT-ACTGTGG--A--AG--AG--C
i Pteronotus_parnellii.KE854991.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14305 37 +     25061 CTGCTTCCCG----G-GAAGCTCATTCCA-A--CCAT--GCAAA--AA--C
i Pteronura_brasiliensis.PteBra_flattened_line_42152     C 0 C 0
s Pteropus_alecto.KB030862.1                              23005978 37 +  28871421 TTGCTTTCTG----G-ACAGCTCATTCTA-A--TCAT--A--GAAGAG--C
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1390064 37 +   4952924 TTGCTTTCTG----G-ACAGCTCATTCTA-A--CCGT--A--GAAGAG--C
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20306255 37 -  38429054 CTGTTTTCTG----G-GGAGCTCACTCCA-A--CCAT--GGAAA--AG--T
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             40533 30 -     91421 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Pygathrix_cinerea.k141_1153803                         I 1 I 8
s Pygathrix_nigripes_b.ctg100                                 7634713 30 +   7812017 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Pygathrix_nigripes_b.ctg100                               I 1 I 8
s Pygathrix_nigripes_a.k141_215492                             40575 30 -     72585 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Pygathrix_nigripes_a.k141_215492                         I 1 I 8
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31299 37 +     55207 TTGCTTTCTC----G-GCAGTTCATTATA-A--CCCT--GGAAG--AG--C
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53606205 30 +  90668790 CTGCTTTGTG----GACCAGCTCATTCCA-G--CCAC--------------
i Rattus_norvegicus.chr16                                C 0 I 5
s Rhinolophus_sinicus.LVEH01000134.1                        389343 37 -   3329780 CTGCTTTCTG----G-ACAGCTCATTCTA-A--CAGT--G--GAAGAG--C
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_188731                            15781 30 -     21983 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Rhinopithecus_bieti.k119_188731                        I 1 I 8
s Rhinopithecus_roxellana.NC_044550.1                     91262150 30 - 195417433 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Rhinopithecus_roxellana.NC_044550.1                    I 1 I 8
s Rhinopithecus_strykeri.ctg102                            7701241 30 +   7961872 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Rhinopithecus_strykeri.ctg102                          I 1 I 8
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17435 37 +    116970 ttgttttctg----g-ACGGCTCATTCCA-A--CCAT--G--GAAGAG--C
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1359 37 -      3450 TTGCTTTCTG----G-GCAGTTCATTATG-A--CCCT--GGAAA--AG--C
i Saiga_tatarica.SaiTat_scaffold_455678                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119968535 37 - 121099817 CTGCTTTGTG----A-GCAGTTCGCTCCA-A--GTGT--G--GA--AGAGC
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40828 37 +     46362 CTGCTTTGTG----A-GCAGTTCGCTCCA-A--GTGT--G--GA--AGAGC
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               40888 37 +     45824 CTGCTTTGTG----A-GCAGTTCGCTCCA-A--GTGT--G--GA--AGAGC
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             57556 37 -     64574 CTGCTTTGTG----A-GCAGTTCGCTCCA-A--GTGT--G--GA--AGAGC
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                              20649 37 -     23631 CTGCTTTGTG----A-GCAGTTCGCTCCA-A--GTGT--G--GA--AGAGC
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 40814 37 -     61129 CTGCTTTGTG----A-GCAGTTCGCTCCA-A--GTGT--G--GA--AGAGC
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5443842 37 -   5703754 CTGCTTTGTG----A-GCAGTTCGCTCCA-A--GTGT--G--GA--AGAGC
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          73081 37 -     80660 CTGCTTTGTG----A-GCAGTTCGCTCCA-A--GTGT--G--GA--AGAGC
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    177111 36 -    313613 CTGCTTTCTG----G-GCAACTCATTACA-A---CATGGA--AG--AG--C
i Scalopus_aquaticus.ScaAqu_scaffold_662                 C 0 I 270
s Semnopithecus_entellus.k141_1705875                         5781 30 +     17286 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Semnopithecus_entellus.k141_1705875                    I 1 I 8
s Semnopithecus_hypoleucos.k141_1910531                       5906 30 -     58920 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Semnopithecus_hypoleucos.k141_1910531                  I 1 I 8
s Semnopithecus_johnii.k141_843753                            5814 30 +     45317 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Semnopithecus_johnii.k141_843753                       I 1 I 8
s Semnopithecus_priam.k141_960425                             5927 30 +      9426 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Semnopithecus_priam.k141_960425                        I 1 I 8
s Semnopithecus_schistaceus.k141_972136                       5820 30 +     24620 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Semnopithecus_schistaceus.k141_972136                  I 1 I 8
s Semnopithecus_vetulus.k141_654052                           1750 30 -      5251 CTGCTTTGCG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Semnopithecus_vetulus.k141_654052                      I 1 I 8
s Sigmodon_hispidus.SigHis_scaffold_20193                     4532 30 -     77746 CTGTTTTCTG----GACCAGCTCATTCCA-G--CCAC--------------
i Sigmodon_hispidus.SigHis_scaffold_20193                C 0 I 5
s Solenodon_paradoxus.SolPar_flattened_line_126              23223 23 +   1910179 CTGCTTTCTG----G--CAATGTATTCCA----------------------
i Solenodon_paradoxus.SolPar_flattened_line_126          C 0 C 0
s Sorex_araneus.JH798187.1                                13682359 23 -  18376816 CTGATTTCCA----C-TCAGTTCAGCAT-----------------------
i Sorex_araneus.JH798187.1                               C 0 I 10
s Spermophilus_dauricus.KZ294078.1                         1976153 21 -   3870691 CTACC-TCTG----T-GCAGTCTGTTC------------------------
i Spermophilus_dauricus.KZ294078.1                       C 0 I 12
s Spilogale_gracilis.SpiGra_flattened_line_13525             59079 37 +     97271 CTGCTTCCTA----G-GCAGCTCATTCAA-A--CCAT--GGAAA--AG--A
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              48312 37 -    196729 CTGCTTTCTG----G-GCATCTCACTCCA-A--CCAT--GGAAA--TG--T
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   63023117 37 -  69701581 CTGCTTTCTG----G-GCAGCTCATTATA-A--CTGT--GGAAG--AG--C
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1105318 37 -   1523678 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTGT--G--GA--AGAGC
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                31541 36 +     41958 CTGCTTCCTG----G--CAGCTTATTCTT-ACTGTAG--A--AG--AG--C
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93874 38 +    116680 CCACCTTCTG----G-GCAGCTCATGGCAAA--TCTG--G--GA--AGACT
i Tamandua_tetradactyla.TamTet_scaffold_1782             I 2 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138707 37 -    156842 CTGCTCTCTG----G-GCAGCTCATTCCA-A--CCAT--GGAAG--AG--C
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    407179 37 +    539355 CTGCTCTTTG----G-GCAGCTCATTCCA-A--CCAT--GGAAG--AG--C
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               50596 36 +     70052 CTGCTGT-TG----G-GAGGCCCATTTTA-A--CTGC--C--GA--AGAGC
i Tarsius_lariang.k141_2201908                           I 1 C 0
s Tarsius_wallacei.k141_722827                               14988 36 +     18080 CTGCTGT-TG----G-GAGGCCCATTTTA-A--CTGC--C--GA--AGAGC
i Tarsius_wallacei.k141_722827                           I 1 C 0
s Theropithecus_gelada.CM009954.1                        186466292 30 + 186847797 CTGCTTTGCA----G-GCAGCTCACTCCA-A--GTGT--G-----------
i Theropithecus_gelada.CM009954.1                        I 1 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_62701               7484 37 -     21356 CTGCTTTCTA----A-GCAGCTCATTCCA-A--CTAT--G--GA--AGAGA
i Thryonomys_swinderianus.ThrSwi_scaffold_62701          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_41106                    5822 25 +     27660 --G-TTTCTG----G-GCAGCGCATTGCA-G--ATG---------------
i Tolypeutes_matacus.TolMat_scaffold_41106               I 4 I 6
s Tonatia_saurophila.TonSau_scaffold_294                    103742 32 +    610378 CTGCTTTCTG----G-GCAGCTTATTCTT-ACTGTGG--A-----------
i Tonatia_saurophila.TonSau_scaffold_294                 C 0 I 5
s Trachypithecus_auratus.k141_95322                          12296 30 -     15799 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Trachypithecus_auratus.k141_95322                      I 1 I 8
s Trachypithecus_crepusculus.k141_539312                     25663 30 +     78344 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Trachypithecus_crepusculus.k141_539312                 I 1 I 8
s Trachypithecus_cristatus.k141_581431                       12467 30 -     15970 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Trachypithecus_cristatus.k141_581431                   I 1 I 8
s Trachypithecus_francoisi.k141_1453105                      11429 30 +     62838 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Trachypithecus_francoisi.k141_1453105                  I 1 I 8
s Trachypithecus_geei.k141_119873                            12394 30 -     17556 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Trachypithecus_geei.k141_119873                        I 1 I 8
s Trachypithecus_germaini.k141_545543                        12408 30 -     15912 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Trachypithecus_germaini.k141_545543                    I 1 I 8
s Trachypithecus_hatinhensis.k141_31479                      11358 30 +     64340 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Trachypithecus_hatinhensis.k141_31479                  I 1 I 8
s Trachypithecus_laotum.k141_928651                          12357 30 +     63452 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Trachypithecus_laotum.k141_928651                      I 1 I 8
s Trachypithecus_leucocephalus.k141_283481                   11432 30 +     21341 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Trachypithecus_leucocephalus.k141_283481               I 1 I 8
s Trachypithecus_melamera.k141_261742                         1494 30 +     11697 CTGCTTTGCA----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Trachypithecus_melamera.k141_261742                    I 1 I 8
s Trachypithecus_obscurus.k141_170351                        13275 30 +     33539 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Trachypithecus_obscurus.k141_170351                    I 1 I 8
s Trachypithecus_phayrei.ctg124                            5965103 30 +   6242583 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Trachypithecus_phayrei.ctg124                          I 1 I 8
s Trachypithecus_pileatus.k141_583962                        13191 30 +     14028 CTGCTTTGTG----G-GCAGCTCACTCCA-A--GTAT--G-----------
i Trachypithecus_pileatus.k141_583962                    I 1 I 8
s Tragulus_javanicus.TraJav_scaffold_3462                     4992 41 +    200418 TTGCTTTCTTTTTTA-TTAGTTCAATATA-A--TCCT--GGAAA--AG--C
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            4313771 37 +  10818551 CTGCCTTCTG----G-GCAGCTCACTCCA-G--CTGT--G--GA--AGAGC
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2195104  8 +   4065304 ---------------------------------------G--GA--ACTGC
i Tupaia_chinensis.KB320699.1                            N 0 C 0
s Tupaia_tana.TupTan_flattened_line_394                      25591  8 +     70247 ---------------------------------------G--GA--ATTGC
i Tupaia_tana.TupTan_flattened_line_394                  N 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15765671 37 +  33153633 TTGCCTTCTG----G-GCAGCTCATTATA-A--CCCT--GCGAG--AG--C
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     948 32 +     21056 ---TTTTCTG----G-GCTGCTCATTTCA-A--CCAC--A--AT--AG--G
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                               4878408 37 -   5085361 CTGATTCCTG----G-GCAGCTCACTCTA-A--CCAT--TGAAA--AG--C
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  31820 37 +     50397 CTGCTTTGGG----G-GCAGCTCATTCCA-C--CTGC--G--AA--AGAGC
i Varecia_rubra.k141_590885                              C 0 C 0
s Varecia_variegata.k141_1100575                              6909 37 +     25465 CTGCTTTGGG----G-GCAGCTCATTCCA-C--CTGC--A--AA--AGAGC
i Varecia_variegata.k141_1100575                         C 0 C 0
s Vicugna_pacos.KN270157.1                                 5390184 37 -   5488506 TTGCTTTCTG----G-GCAGCTCATTACA-A--CCCT--GGAAG--AG--C
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 42938 37 -     43706 CTGCTTTCTG----G-GCAGCTCACTTCA-G--CCAT--GGAAA--AG--C
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                         24793 22 +    224448 CTTCCTTCTA----T-GCAGCCTGTTC------------------------
i Xerus_inauris.XerIna_scaffold_2302                     C 0 I 12
s Zalophus_californianus.ZalCal_flattened_line_17732         29993 37 +     86975 CCGCTTCCTG----G-GCAGCTCACTCCA-A--CCAG--GGAAA--AG--C
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      39079 34 +     63895 CTGCTTTCTG----G---ATCTCAT-CTA-T--CGAT--G--GA--GGAGC
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21818 37 -     22999 TTGCCTTCTG----G-GCAGCTCATTATA-A--CCCT--GGAAG--AG--C
i Ziphius_cavirostris.ZipCav_flattened_line_16896        C 0 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I
e Gorilla_beringei.k141_179627                                1068 289 +      1068 T

a score=0.000000
s hg38.chrUn_KI270755v1                                      11337 4 +     36723 A--GAT
s Acinonyx_jubatus.LLWD01001279.1                           836872 3 +   1699592 A--GG-
i Acinonyx_jubatus.LLWD01001279.1                        C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_21377                     10878 4 -     63021 A--GGC
i Acomys_cahirinus.AcoCah_scaffold_21377                 I 5 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538554 4 -  29979442 A--GAT
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            107996 4 -    347723 A--GAT
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                     1567 3 +     61208 A--AG-
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   40886 3 -     52922 ---CAC
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          7217 3 +     11307 ---CAC
i Allochrocebus_lhoesti.k141_1932296                     C 0 C 0
s Allochrocebus_preussi.k141_499905                           7389 3 -     13300 ---CAC
i Allochrocebus_preussi.k141_499905                      C 0 C 0
s Allochrocebus_solatus.k141_139760                           9270 3 +     12926 ---CAC
i Allochrocebus_solatus.k141_139760                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             31942 4 +     51355 A--GAT
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               25088 4 -     36483 A--GAT
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              7193 4 -     13496 A--GAT
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23975 4 +     27940 A--GAT
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15783 4 -     39310 A--GAT
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            24041 4 +     30492 A--GAT
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28244 4 +     47717 A--GAT
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_2029433                            79244 4 +     87306 A--GAT
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             39226 4 +     50774 A--GAT
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707959 4 -   2318259 A--GAC
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      209547 4 +    412891 A--GAC
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303             27188 4 -     32520 A--GAC
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_2596348                                   5473 4 +     12024 A--GAT
i Aotus_azarae.k141_2596348                              C 0 C 0
s Aotus_griseimembra.k141_2227177                             5140 4 -     10972 A--GAT
i Aotus_griseimembra.k141_2227177                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4333601 4 -   5030052 A--GAT
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_1801223                              5533 4 -     12698 A--GAT
i Aotus_trivirgatus.k141_1801223                         C 0 C 0
s Aotus_vociferans.k141_506037                                4993 4 -     11998 A--GAT
i Aotus_vociferans.k141_506037                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22385 4 +     39421 A--GAA
i Aplodontia_rufa.AprRuf_scaffold_37633                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       14455 4 +     45910 A--AAT
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                 26997 4 +     43469 A--GAC
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21232237 4 -  21539123 A--GAT
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3309 4 -     48076 A--GAT
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18775 4 -     22344 A--GAT
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31831 4 -     89868 A--GAT
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36244 4 -     40414 A--GAT
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                44078 4 +     72325 A--GAT
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75841 4 -     92717 A--AAT
i Avahi_laniger.k141_765380                              C 0 I 3
s Avahi_peyrierasi.k141_1424874                              76424 4 +     85213 A--AAT
i Avahi_peyrierasi.k141_1424874                          C 0 I 3
s Balaenoptera_acutorostrata.KI537508.1                   15222620 4 +  23207421 A--GAC
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4623 4 +     25979 A--GAC
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     13017 4 -    124022 A--GAC
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                    233195 4 -    288883 A--GAC
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20306570 4 +  48749331 A--GAC
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1159672 4 -   1948126 A--AAC
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18116782 4 +  45695690 A--GAC
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2852237 4 +   4408762 A--GAC
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                117100 4 -    122966 A--GAT
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76578 4 +     81800 A--GAT
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45783 4 -     95584 A--GAT
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69878 4 -    119600 A--GAT
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020606 4 -  17673402 A--GAC
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2353436 4 -   7040546 A--GAC
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  421695 4 -   1652518 A--GAC
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17831898 4 -  60362399 A--CAT
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32642 4 -     43241 A--CAT
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067366 4 -   9314153 A--CAT
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17992025 4 -  59632846 A--CAT
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18533131 4 +  63665305 A--CAT
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18862022 4 +  46296322 G--GAC
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18092732 4 -  44709034 G--GAC
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_118970                   7453 3 -      8274 ---GAC
i Capromys_pilorides.CapPil_scaffold_118970              C 0 C 0
s Carlito_syrichta.NW_007259797.1                           180055 4 -    496798 A--AGT
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_737331                472 4 -       918 A--GGC
i Carollia_perspicillata.CarPer_scaffold_737331          C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    167281 4 +    179628 T--GAG
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                    113842 4 +    217609 A--GAC
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18367704 4 -  23392119 A--GAC
i Cavia_aperea.AVPZ01000300.1                            C 0 C 0
s Cavia_porcellus.DS562891.1                              18379969 4 -  23407841 A--GAC
i Cavia_porcellus.DS562891.1                             C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_8919                       118812 4 +    143979 A--GAC
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 C 0
s Cebus_albifrons.Contig27                                25675722 4 +  26074798 A--GAT
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               22190 4 +     28840 A--GAT
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7861 4 +     13997 A--GAT
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29979 4 +     31688 A--AGT
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12257390 4 +  27778364 C--AAT
i Ceratotherium_simum.JH767749.1                         C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          3097 4 +     15641 C--AAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     C 0 C 0
s Cercocebus_atys.KQ010504.1                               4501866 3 +   4669795 ---CAC
i Cercocebus_atys.KQ010504.1                             C 0 C 0
s Cercocebus_chrysogaster.k141_2766003                       23138 3 -     30935 ---CAC
i Cercocebus_chrysogaster.k141_2766003                   C 0 C 0
s Cercocebus_lunulatus.k141_245046                            7540 3 +     18174 ---CAC
i Cercocebus_lunulatus.k141_245046                       C 0 C 0
s Cercocebus_torquatus.k141_4063387                           7377 3 +     18249 ---CAC
i Cercocebus_torquatus.k141_4063387                      C 0 C 0
s Cercopithecus_ascanius.k141_4281816                         2499 3 -      5884 ---CAC
i Cercopithecus_ascanius.k141_4281816                    C 0 C 0
s Cercopithecus_cephus.k141_1630443                           1523 3 +      4620 ---CAC
i Cercopithecus_cephus.k141_1630443                      C 0 C 0
s Cercopithecus_diana.k141_488174                             7959 3 +     10982 ---CAC
i Cercopithecus_diana.k141_488174                        C 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1505 3 +      4810 ---CAC
i Cercopithecus_hamlyni.k141_1302205                     C 0 C 0
s Cercopithecus_lowei.k141_4082698                            7421 3 +     34178 ---CAC
i Cercopithecus_lowei.k141_4082698                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38849531 3 +  39242232 ---CAC
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21256324 3 -  21565898 ---CAC
i Cercopithecus_mona.ctg39                               C 0 T 3175
s Cercopithecus_neglectus.k141_557928                         7587 3 -     18401 ---CGC
i Cercopithecus_neglectus.k141_557928                    C 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7650 3 -     15013 ---CAC
i Cercopithecus_nictitans.k141_1200139                   C 0 C 0
s Cercopithecus_petaurista.k141_365908                        7621 3 +     11214 ---CAC
i Cercopithecus_petaurista.k141_365908                   C 0 C 0
s Cercopithecus_pogonias.k141_391400                          2441 3 -     13831 ---CAC
i Cercopithecus_pogonias.k141_391400                     C 0 C 0
s Cercopithecus_roloway.k141_1248991                         27615 3 +     68532 ---CAC
i Cercopithecus_roloway.k141_1248991                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             676 4 -      1897 A--GAC
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       I 6 C 0
s Cheirogaleus_major.k141_333249                             43832 4 -     52598 A--AGT
i Cheirogaleus_major.k141_333249                         C 0 I 3
s Cheirogaleus_medius.k141_1055463                           39163 4 +     57038 A--AGT
i Cheirogaleus_medius.k141_1055463                       C 0 I 3
s Cheracebus_lucifer.k141_49986                               9996 4 -     17098 A--GGC
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9866 4 +     17877 A--GGC
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167433 4 -    216457 A--GGC
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71906 4 +     76511 A--GGC
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1276241 4 +   2543920 A--GAC
i Chinchilla_lanigera.JH722012.1                         C 0 C 0
s Chiropotes_israelita.k141_747660                          114125 4 +    146308 A--GAT
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          46033 4 -     50570 A--GAT
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455399 3 -  18827391 ---CAC
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41342 3 -     50209 ---CAC
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448324 3 + 135778131 ---CAC
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   973 4 -     25429 G--GAG
i Choloepus_didactylus.ChoDid_scaffold_22546             C 0 C 0
s Choloepus_hoffmanni.KN194906.1                            196104 4 +    839153 G--GAG
i Choloepus_hoffmanni.KN194906.1                         C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               7051 4 -      9651 A--AAT
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          C 0 I 7
s Colobus_angolensis.KN981557.1                            1936266 3 +   2368649 ---CAC
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199970244 3 + 200372422 ---CAC
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              58558 3 +     84244 ---CAC
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17567017 4 -  53390261 A--GGT
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_153350           159 4 +      5041 A--GAC
i Craseonycteris_thonglongyai.CraTho_scaffold_153350     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 16789 4 +     83289 A--AGC
i Cricetomys_gambianus.CriGam_scaffold_14425             I 5 C 0
s Cricetulus_griseus.LT883664.1                           11697416 4 + 224834208 A--AGC
i Cricetulus_griseus.LT883664.1                          I 5 C 0
s Crocidura_indochinensis.CroInd_scaffold_522851               177 6 +      2245 ACCAAT
i Crocidura_indochinensis.CroInd_scaffold_522851         I 10 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59578 4 -     87169 A--GAT
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    860018 4 +   1526836 A--GAC
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   6483 4 -     50838 A--GAC
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_167855                 1778 4 +      7355 A--GAT
i Cuniculus_paca.CunPac_flattened_line_167855            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_15900            19096 4 -     75252 A--GAT
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 C 0
s Dasypus_novemcinctus.JH564415.1                            93211 4 +   2246927 A--GAT
i Dasypus_novemcinctus.JH564415.1                        I 6 C 0
s Daubentonia_madagascariensis.ctg71                      12562591 4 -  12879189 A--AAT
i Daubentonia_madagascariensis.ctg71                     C 0 I 3
s Delphinapterus_leucas.KZ290073.1                        16841771 4 +  35494412 A--GAC
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8650488 4 +  20541912 A--GAC
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  699185 4 +   1390856 C--AAT
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_5955                   31988 4 +    198055 C--AAT
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 C 0
s Dinomys_branickii.DinBra_scaffold_21862                    59982 4 +     67921 A--GAC
i Dinomys_branickii.DinBra_scaffold_21862                C 0 C 0
s Dipodomys_ordii.KN672350.1                              18914802 4 +  37912305 A--AAC
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_47531                  13400 4 -     26976 A--AAC
i Dipodomys_stephensi.DipSte_scaffold_47531              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_260697                 1718 4 +      2313 A--AAC
i Dolichotis_patagonum.DolPat_scaffold_260697            C 0 C 0
s Eidolon_helvum.KE797349.1                                  19391 4 -     31197 a--aac
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       342195 4 +    607251 A--GAC
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          47808 4 -    110024 T--AGC
i Ellobius_lutescens.LOEQ01008920.1                      I 5 C 0
s Ellobius_talpinus.LOJH01050844.1                            9059 4 +     12610 T--CGC
i Ellobius_talpinus.LOJH01050844.1                       I 5 C 0
s Enhydra_lutris.KZ291758.1                               16365895 4 -  41312741 A--GAT
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1310509 4 +   4378816 A--AAC
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18557978 4 -  39960074 A--AAC
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               60019 4 +    498745 A--AAC
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3365545 6 -   7059049 GCAGAG
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21237605 3 -  21539334 ---CAC
i Erythrocebus_patas.Contig38                            C 0 T 2203
s Eschrichtius_robustus.EscRob_flattened_line_8968           40944 4 +    133382 A--GAC
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5246 4 -     25849 A--GAC
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_1869827                             12951 4 -     21348 A--AAT
i Eulemur_albifrons.k141_1869827                         C 0 I 3
s Eulemur_collaris.k141_601111                               10151 4 +     70999 A--AAT
i Eulemur_collaris.k141_601111                           C 0 I 3
s Eulemur_coronatus.k141_384460                               7890 4 -    112731 A--AAT
i Eulemur_coronatus.k141_384460                          C 0 I 3
s Eulemur_flavifrons.k141_433119                              6900 4 -     68309 A--AAT
i Eulemur_flavifrons.k141_433119                         C 0 I 3
s Eulemur_fulvus.k141_2627385                                 4036 4 -      9374 A--AAT
i Eulemur_fulvus.k141_2627385                            C 0 I 3
s Eulemur_macaco.k141_1562045                                33131 4 +     75513 A--AAT
i Eulemur_macaco.k141_1562045                            C 0 I 3
s Eulemur_mongoz.k141_232305                                 31016 4 +     97555 A--AAT
i Eulemur_mongoz.k141_232305                             C 0 I 3
s Eulemur_rubriventer.k141_1423786                            7671 4 -     30972 A--AAT
i Eulemur_rubriventer.k141_1423786                       C 0 I 3
s Eulemur_rufus.k141_1120150                                  7548 4 +     16616 A--AAT
i Eulemur_rufus.k141_1120150                             C 0 I 3
s Eulemur_sanfordi.k141_1122526                              34135 4 +    111500 A--AAT
i Eulemur_sanfordi.k141_1122526                          C 0 I 3
s Felis_catus.CM001381.2                                  20268013 3 + 206538554 A--GG-
i Felis_catus.CM001381.2                                 C 0 C 0
s Felis_catus_fca126.CM031415.1                           20226795 3 + 205367284 A--GG-
i Felis_catus_fca126.CM031415.1                          C 0 C 0
s Felis_nigripes.FelNig_flattened_line_44075                  3821 3 -     25330 A--GG-
i Felis_nigripes.FelNig_flattened_line_44075             C 0 C 0
s Fukomys_damarensis.KN121974.1                             872430 4 +   3816255 A--GAG
i Fukomys_damarensis.KN121974.1                          C 0 C 0
s Galago_moholi.ctg3793                                        940 4 +    137831 A--AAT
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             2056 4 -     22493 A--AAT
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                              177 4 +     32986 A--AAT
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_75343               16022 4 -     17176 A--GAT
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     637052 4 -    660261 A--GAT
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_149316                            5369 4 +      8016 A--GAC
i Glis_glis.GliGli_scaffold_149316                       C 0 C 0
s Gorilla_gorilla.LT578341.1                             186365218 4 + 186649187 A--GAT
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   55124 4 +     78134 A--GAC
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                           7545 4 +     40692 A--AAT
i Hapalemur_alaotrensis.k141_330369                      C 0 I 3
s Hapalemur_gilberti.k141_435261                             17233 4 +     22537 A--AAT
i Hapalemur_gilberti.k141_435261                         C 0 I 3
s Hapalemur_griseus.k141_679418                              15880 4 -     28566 A--AAT
i Hapalemur_griseus.k141_679418                          C 0 I 3
s Hapalemur_meridionalis.k141_258450                         14612 4 +     42923 A--AAT
i Hapalemur_meridionalis.k141_258450                     C 0 I 3
s Hapalemur_occidentalis.k141_578367                         17867 4 +     53142 A--AAT
i Hapalemur_occidentalis.k141_578367                     C 0 I 3
s Helogale_parvula.HelPar_flattened_line_2585               273267 4 +    327341 A--GAT
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14742 4 -     48891 A--GAC
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20686881 4 +  22651954 A--AAG
i Heterocephalus_glaber.JH602082.1                       C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10404 4 -     15841 T--GAC
i Heterohyrax_brucei.HetBruBak_scaffold_90013            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6645 4 +     36432 A--GAC
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       132264 4 +   1711038 A--GAT
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_65612                9177 4 -     20285 A--GAC
i Hipposideros_galeritus.HipGal_scaffold_65612           C 0 C 0
s Hoolock_leuconedys.ctg274                                    460637 4 +    630532 A--GAT
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   9141 4 -     22022 A--GAC
i Hyaena_hyaena.HyaHya_flattened_line_62789              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            43378 4 -    143317 A--AAC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 C 0
s Hylobates_agilis.k141_967383                                1906 4 -      4846 A--GAT
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                364 4 -      8919 A--GAT
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555335 4 - 191637585 A--GAT
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3348222 4 -  11177569 A--GAT
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                     101378 4 +    135385 A--GAC
i Hystrix_cristata.HysCri_scaffold_5660                  I 12 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543937 4 -   7955117 A--GAA
i Ictidomys_tridecemlineatus.JH393364.1                  I 12 C 0
s Indri_indri.k141_1997670                                    2371 4 +      8453 A--AAT
i Indri_indri.k141_1997670                               C 0 I 3
s Inia_geoffrensis.IniGeo_flattened_line_34779               29363 4 -     31341 A--GAT
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8298824 3 -   9596543 A--AG-
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                  5114 4 +     97402 A--GAC
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         33308 4 -     38430 A--GAC
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544533 4 -  30322482 A--AAT
i Lemur_catta.scaffold_24                                C 0 I 3
s Lepilemur_ankaranensis.k141_2922                            8917 4 -     24677 A--AAT
i Lepilemur_ankaranensis.k141_2922                       C 0 I 3
s Lepilemur_dorsalis.k141_387009                              4886 4 -     31569 A--AAT
i Lepilemur_dorsalis.k141_387009                         C 0 I 3
s Lepilemur_ruficaudatus.k141_121139                         22948 4 +     25010 A--AAT
i Lepilemur_ruficaudatus.k141_121139                     C 0 I 3
s Lepilemur_septentrionalis.k141_185316                      48502 4 +     54090 A--AAT
i Lepilemur_septentrionalis.k141_185316                  C 0 I 3
s Leptonychotes_weddellii.KB714746.1                       3074616 4 +   3914936 A--GAT
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_57262                     13047 4 -     23961 A--GAT
i Lepus_americanus.LepAme_scaffold_57262                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             299280 4 -    662738 A--GAC
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1464858 3 +   1826925 ---CAC
i Lophocebus_aterrimus.ctg367                            C 0 C 0
s Loris_lydekkerianus.k141_2958567                            3948 4 -     22734 A--AAT
i Loris_lydekkerianus.k141_2958567                       C 0 C 0
s Loris_tardigradus.ctg83                                  1061376 4 +   6120653 A--AAT
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17988265 4 -  59628241 A--CAT
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              33118 3 +     40492 ---CAC
i Macaca_arctoides.k141_2326796                          C 0 C 0
s Macaca_assamensis.Contig5                               59703043 3 +  60120075 ---CAC
i Macaca_assamensis.Contig5                              C 0 C 0
s Macaca_cyclopis.k119_794849                                 7237 3 +      8714 ---CAC
i Macaca_cyclopis.k119_794849                            C 0 C 0
s Macaca_fascicularis.k141_814140                           107671 3 -    114318 ---CAC
i Macaca_fascicularis.k141_814140                        C 0 C 0
s Macaca_fuscata.k119_943731                                  7482 3 +     13165 ---CAC
i Macaca_fuscata.k119_943731                             C 0 C 0
s Macaca_leonina.k141_2438370                                12855 3 -     14632 ---CAC
i Macaca_leonina.k141_2438370                            C 0 C 0
s Macaca_maura.k141_515834                                   13013 3 +     14712 ---CAC
i Macaca_maura.k141_515834                               C 0 C 0
s Macaca_mulatta.NC_041758.1                             186867052 3 + 187317192 ---CAC
i Macaca_mulatta.NC_041758.1                             C 0 C 0
s Macaca_nemestrina.KQ007038.1                            25492167 3 -  25927173 ---CAC
i Macaca_nemestrina.KQ007038.1                           C 0 C 0
s Macaca_nigra.k141_128247                                   20483 3 +     98240 ---CAA
i Macaca_nigra.k141_128247                               C 0 C 0
s Macaca_radiata.k141_3254723                                 6025 3 +     10028 ---CAC
i Macaca_radiata.k141_3254723                            C 0 C 0
s Macaca_siberu.k141_1929020                                  7277 3 -      9047 ---CAC
i Macaca_siberu.k141_1929020                             C 0 C 0
s Macaca_silenus.Contig273                                  358286 3 -    668171 ---CAC
i Macaca_silenus.Contig273                               C 0 C 0
s Macaca_thibetana.k99_596453                                 1658 3 -      5469 ---CAC
i Macaca_thibetana.k99_596453                            C 0 C 0
s Macaca_tonkeana.k141_683787                                 7496 3 +      9199 ---CAA
i Macaca_tonkeana.k141_683787                            C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4024                 24171 4 +    270270 A--GAC
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961934 3 -  24302211 ---CAC
i Mandrillus_leucophaeus.scaffold280                     C 0 C 0
s Mandrillus_sphinx.Contig270                               377687 3 +    752769 ---CAC
i Mandrillus_sphinx.Contig270                            C 0 C 0
s Manis_javanica.JSZB01003497.1                              40357 4 +    737560 A--GAA
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              72527 4 -    317179 A--GAA
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33125001 4 -  40650429 A--GAA
i Marmota_marmota.CZRN01000018.1                         I 12 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        36063 4 -    207569 A--GCG
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23433 4 +     74585 A--GAT
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 66209 4 +    140813 A--AGC
i Meriones_unguiculatus.MerUng_scaffold_7390             I 5 C 0
s Mesocricetus_auratus.KB708134.1                         12212520 4 -  29670104 A--AGC
i Mesocricetus_auratus.KB708134.1                        I 5 C 0
s Mesoplodon_bidens.MesBid_scaffold_74495                     5089 4 -     19186 A--GAC
i Mesoplodon_bidens.MesBid_scaffold_74495                C 0 C 0
s Microcebus_murinus.CM007674.1                           18313503 4 -  93316391 C--AAT
i Microcebus_murinus.CM007674.1                          C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_39861                18946 4 -     30105 A--GAC
i Micronycteris_hirsuta.MicHir_scaffold_39861            C 0 C 0
s Miopithecus_ogouensis.k141_791330                           1808 3 -     13566 ---CAC
i Miopithecus_ogouensis.k141_791330                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        25055 4 +     26817 A--GAT
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    57017 4 -    437263 A--GAC
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 162154 4 -    366855 A--GAC
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32194 4 +     82753 A--GAC
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21850 4 +     63510 A--GAT
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mus_pahari.LT608297.1                                   31390990 4 -  89631738 A--GGT
i Mus_pahari.LT608297.1                                  I 5 C 0
s Muscardinus_avellanarius.MusAve_scaffold_74954             15676 4 -     17106 A--GAA
i Muscardinus_avellanarius.MusAve_scaffold_74954         C 0 C 0
s Mustela_putorius.JH418006.1                               330647 4 -  14710649 A--GAT
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      5665 4 +     27262 A--GAC
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14397 4 -     28317 A--GAC
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 C 0
s Nasalis_larvatus.k141_970469                               18676 3 +     37058 ---GAT
i Nasalis_larvatus.k141_970469                           I 8 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343608 4 +  31847680 A--GAT
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5895069 4 +   7148211 A--GAC
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9182155 4 -   9404916 A--CAT
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102653490 4 - 196305487 A--AAT
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_921975                              9632 4 +     15238 A--AAT
i Nycticebus_coucang.k141_921975                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827979 4 + 199412804 A--AAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                  800386 4 +  11899542 A--GAC
i Octodon_degus.JH651603.1                               C 0 C 0
s Odobenus_rosmarus.KB229312.1                              534156 4 -   2017862 A--GAT
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         168864 4 +    630418 G--GAC
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107745 4 -    150152 A--GAT
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25359 4 +    140218 A--AGC
i Ondatra_zibethicus.OndZib_scaffold_7387                I 5 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                   12530 4 +     41509 A--AGC
i Onychomys_torridus.OnyTor_scaffold_28377               I 5 C 0
s Orcinus_orca.KB316932.1                                  2812295 4 -  10937097 A--GAC
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1925 4 -      4812 A--GAT
i Orycteropus_afer.OryAfe_flattened_line_327065          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190651 4 + 174332312 A--GAT
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       495230 4 -    559221 A--CAT
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_187572                         4595 4 -      5557 A--AAT
i Otolemur_crassicaudatus.k141_187572                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             738248 4 -   1103335 A--AAT
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17617675 4 +  44047080 A--GAC
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1676 4 -     13921 A--GAC
i Ovis_canadensis.OviCan_scaffold_75879                  C 0 C 0
s Pan_paniscus.KQ411608.1                                     3527 4 +     15831 A--GAT
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649341 4 + 189151597 A--GAT
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Panthera_onca.PanOnc_flattened_line_3271                  181687 3 +    230217 A--GG-
i Panthera_onca.PanOnc_flattened_line_3271               C 0 C 0
s Panthera_pardus.KV860321.1                                296476 3 +  18783137 A--GG-
i Panthera_pardus.KV860321.1                             C 0 C 0
s Panthera_tigris.KE722367.1                               4751833 3 -   8748460 A--GG-
i Panthera_tigris.KE722367.1                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1296593 4 -   2937107 A--GAC
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183470107 3 + 183742232 ---CAC
i Papio_anubis.CM001495.2                                C 0 C 0
s Papio_cynocephalus.k141_703094                              6445 3 -     17637 ---CAC
i Papio_cynocephalus.k141_703094                         C 0 C 0
s Papio_hamadryas.Contig39                                20592604 3 +  20919399 ---CAC
i Papio_hamadryas.Contig39                               C 0 C 0
s Papio_kindae.k141_1936966                                  31869 3 +     41871 ---CAC
i Papio_kindae.k141_1936966                              C 0 C 0
s Papio_papio.k141_2087334                                    7452 3 -     13745 ---CAC
i Papio_papio.k141_2087334                               C 0 C 0
s Papio_ursinus.k141_4818248                                 14952 3 +     25215 ---CAC
i Papio_ursinus.k141_4818248                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42604 4 -     78924 A--GAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1387561                          11878 4 +     15382 A--AAT
i Perodicticus_ibeanus.k141_1387561                      C 0 C 0
s Perodicticus_potto.k141_842195                             18428 4 -     21729 A--AAT
i Perodicticus_potto.k141_842195                         C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13673 4 +     28765 T--GAC
i Perognathus_longimembris.PerPac_flattened_line_39705   C 0 C 0
s Peromyscus_maniculatus.KI615324.1                       18245286 4 -  18517816 A--TGC
i Peromyscus_maniculatus.KI615324.1                      I 5 C 0
s Petromus_typicus.PetTyp_scaffold_384010                      760 3 +       811 A---AG
i Petromus_typicus.PetTyp_scaffold_384010                C 0 N 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              38998 4 +     63832 A--GAC
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                           28908 3 -     55023 ---CAC
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64326 3 +     89929 ---CAC
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14417 3 -     40849 ---CAC
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326894 3 -  14605196 ---CAC
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                             19715 4 +     26961 A--GAC
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15728 4 +     23417 A--GAC
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19709 4 +     29694 A--GAC
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44744 4 +     52772 A--GAC
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19735 4 +     26198 A--GAC
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3956070 4 +   4542175 A--GAC
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19662 4 -     23490 A--GAC
i Pithecia_vanzolinii.k141_1697688                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_175331           5166 4 -      7527 A--GAC
i Platanista_gangetica.PlaMin_flattened_line_175331      C 0 C 0
s Plecturocebus_bernhardi.k141_2549090                       22433 4 -     39866 A--GGT
i Plecturocebus_bernhardi.k141_2549090                   C 0 C 0
s Plecturocebus_brunneus.k141_1495506                        31591 4 +     34906 A--GGT
i Plecturocebus_brunneus.k141_1495506                    C 0 C 0
s Plecturocebus_caligatus.k141_1382851                       35854 4 +     87950 A--GGT
i Plecturocebus_caligatus.k141_1382851                   C 0 C 0
s Plecturocebus_cinerascens.k141_1164729                     36653 4 +     88961 A--GGT
i Plecturocebus_cinerascens.k141_1164729                 C 0 C 0
s Plecturocebus_cupreus.k141_2351393                         22346 4 +     39403 A--GGT
i Plecturocebus_cupreus.k141_2351393                     C 0 C 0
s Plecturocebus_dubius.k141_1058799                          36122 4 -     87928 A--GGT
i Plecturocebus_dubius.k141_1058799                      C 0 C 0
s Plecturocebus_grovesi.k141_2013005                         43103 4 +     60166 A--GGT
i Plecturocebus_grovesi.k141_2013005                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_3303950                      43296 4 +     67232 A--GGT
i Plecturocebus_hoffmannsi.k141_3303950                  C 0 C 0
s Plecturocebus_miltoni.k141_349282                          38761 4 +     90634 A--GGT
i Plecturocebus_miltoni.k141_349282                      C 0 C 0
s Plecturocebus_moloch.k141_1031110                          36144 4 -     89403 A--GGT
i Plecturocebus_moloch.k141_1031110                      C 0 C 0
s Pongo_abelii.CM009266.2                                189182123 4 + 189387572 A--GAT
i Pongo_abelii.CM009266.2                                C 0 C 0
s Pongo_pygmaeus.ctg66                                     9597017 4 +   9816681 A--GAT
i Pongo_pygmaeus.ctg66                                   C 0 C 0
s Presbytis_comata.k141_1230337                              18501 3 -     69807 ---GAT
i Presbytis_comata.k141_1230337                          I 8 C 0
s Presbytis_mitrata.k141_584736                              11863 3 +     80239 ---GAT
i Presbytis_mitrata.k141_584736                          I 8 C 0
s Procavia_capensis.ProCapCap_scaffold_112514                11721 4 +     16234 T--GAC
i Procavia_capensis.ProCapCap_scaffold_112514            C 0 C 0
s Prolemur_simus.MPIZ01000396.1                            2617162 4 -   4620579 A--AAT
i Prolemur_simus.MPIZ01000396.1                          C 0 I 3
s Propithecus_coquerelli.NW_012148875.1                    1013223 4 +   2598838 A--AAT
i Propithecus_coquerelli.NW_012148875.1                  C 0 I 3
s Propithecus_coronatus.k141_114130                           9291 4 -     19127 A--AAT
i Propithecus_coronatus.k141_114130                      C 0 I 3
s Propithecus_diadema.k141_599139                            10385 4 +     10533 A--AAT
i Propithecus_diadema.k141_599139                        C 0 T 8299
s Propithecus_edwardsi.k141_635656                             627 4 +     30655 A--AAT
i Propithecus_edwardsi.k141_635656                       C 0 I 3
s Propithecus_perrieri.k141_217725                            2819 4 +     14082 A--AAT
i Propithecus_perrieri.k141_217725                       C 0 I 3
s Propithecus_tattersalli.k141_790011                        50504 4 -     67325 A--AAT
i Propithecus_tattersalli.k141_790011                    C 0 I 3
s Propithecus_verreauxi.k141_1047036                          7297 4 -     35169 A--AAT
i Propithecus_verreauxi.k141_1047036                     C 0 I 3
s Psammomys_obesus.NESX01036367.1                            19482 4 -     31435 a--agc
i Psammomys_obesus.NESX01036367.1                        I 5 C 0
s Pteronotus_parnellii.KE854991.1                             1711 4 -     11709 A--GAC
i Pteronotus_parnellii.KE854991.1                        C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_42152         14342 4 +     25061 A--GAT
i Pteronura_brasiliensis.PteBra_flattened_line_42152     C 0 C 0
s Pteropus_alecto.KB030862.1                              23006015 4 +  28871421 A--GAC
i Pteropus_alecto.KB030862.1                             C 0 C 0
s Pteropus_vampyrus.KN525825.1                             1390101 4 +   4952924 A--GAC
i Pteropus_vampyrus.KN525825.1                           C 0 C 0
s Puma_concolor.QAVW01001104.1                            20306292 3 -  38429054 A--GG-
i Puma_concolor.QAVW01001104.1                           C 0 C 0
s Pygathrix_cinerea.k141_1153803                             40571 3 -     91421 ---GAT
i Pygathrix_cinerea.k141_1153803                         I 8 C 0
s Pygathrix_nigripes_b.ctg100                                 7634751 3 +   7812017 ---GAT
i Pygathrix_nigripes_b.ctg100                               I 8 C 0
s Pygathrix_nigripes_a.k141_215492                             40613 3 -     72585 ---GAT
i Pygathrix_nigripes_a.k141_215492                         I 8 C 0
s Rangifer_tarandus.RanTarSib_scaffold_29737                 31336 4 +     55207 A--GAC
i Rangifer_tarandus.RanTarSib_scaffold_29737             C 0 C 0
s Rattus_norvegicus.chr16                                 53606240 4 +  90668790 A--GGT
i Rattus_norvegicus.chr16                                I 5 C 0
s Rhinolophus_sinicus.LVEH01000134.1                        389380 4 -   3329780 A--GAC
i Rhinolophus_sinicus.LVEH01000134.1                     C 0 C 0
s Rhinopithecus_bieti.k119_188731                            15819 3 -     21983 ---GAT
i Rhinopithecus_bieti.k119_188731                        I 8 C 0
s Rhinopithecus_roxellana.NC_044550.1                     91262188 3 - 195417433 ---GAT
i Rhinopithecus_roxellana.NC_044550.1                    I 8 C 0
s Rhinopithecus_strykeri.ctg102                            7701279 3 +   7961872 ---GAT
i Rhinopithecus_strykeri.ctg102                          I 8 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_8906                 17472 4 +    116970 A--GAC
i Rousettus_aegyptiacus.RouAeg_scaffold_8906             C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_455678                       1396 4 -      3450 A--GAC
i Saiga_tatarica.SaiTat_scaffold_455678                  C 0 C 0
s Saimiri_boliviensis.NW_024100920.1                     119968572 4 - 121099817 A--GAT
i Saimiri_boliviensis.NW_024100920.1                     C 0 C 0
s Saimiri_cassiquiarensis.k141_2188234                       40865 4 +     46362 A--GAT
i Saimiri_cassiquiarensis.k141_2188234                   C 0 C 0
s Saimiri_macrodon.k141_716185                               40925 4 +     45824 A--GAT
i Saimiri_macrodon.k141_716185                           C 0 C 0
s Saimiri_oerstedii.k141_1487881                             57593 4 -     64574 A--GAT
i Saimiri_oerstedii.k141_1487881                         C 0 C 0
s Saimiri_sciureus.k141_2278166                              20686 4 -     23631 A--GAT
i Saimiri_sciureus.k141_2278166                          C 0 C 0
s Saimiri_ustus.k141_1484609                                 40851 4 -     61129 A--GAT
i Saimiri_ustus.k141_1484609                             C 0 C 0
s Sapajus_apella.ctg103                                    5443879 4 -   5703754 A--GAT
i Sapajus_apella.ctg103                                  C 0 C 0
s Sapajus_macrocephalus.k141_351809                          73118 4 -     80660 A--GAT
i Sapajus_macrocephalus.k141_351809                      C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_662                    177417 4 -    313613 A--GGT
i Scalopus_aquaticus.ScaAqu_scaffold_662                 I 270 C 0
s Semnopithecus_entellus.k141_1705875                         5819 3 +     17286 ---GAT
i Semnopithecus_entellus.k141_1705875                    I 8 C 0
s Semnopithecus_hypoleucos.k141_1910531                       5944 3 -     58920 ---GAT
i Semnopithecus_hypoleucos.k141_1910531                  I 8 C 0
s Semnopithecus_johnii.k141_843753                            5852 3 +     45317 ---GAT
i Semnopithecus_johnii.k141_843753                       I 8 C 0
s Semnopithecus_priam.k141_960425                             5965 3 +      9426 ---GAT
i Semnopithecus_priam.k141_960425                        I 8 C 0
s Semnopithecus_schistaceus.k141_972136                       5858 3 +     24620 ---GAT
i Semnopithecus_schistaceus.k141_972136                  I 8 C 0
s Semnopithecus_vetulus.k141_654052                           1788 3 -      5251 ---GAT
i Semnopithecus_vetulus.k141_654052                      I 8 C 0
s Sigmodon_hispidus.SigHis_scaffold_20193                     4567 4 -     77746 A--AGC
i Sigmodon_hispidus.SigHis_scaffold_20193                I 5 C 0
s Sorex_araneus.JH798187.1                                13682392 6 -  18376816 ACCAAT
i Sorex_araneus.JH798187.1                               I 10 C 0
s Spermophilus_dauricus.KZ294078.1                         1976186 4 -   3870691 A--GAA
i Spermophilus_dauricus.KZ294078.1                       I 12 C 0
s Spilogale_gracilis.SpiGra_flattened_line_13525             59116 4 +     97271 A--GAT
i Spilogale_gracilis.SpiGra_flattened_line_13525         C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_6629              48349 4 -    196729 A--GAT
i Suricata_suricatta.SurSur_flattened_line_6629          C 0 C 0
s Sus_scrofa.CM000828.4                                   63023154 4 -  69701581 A--GAC
i Sus_scrofa.CM000828.4                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_199                      1105355 4 -   1523678 A--GAT
i Symphalangus_syndactylus.tarseq_199                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_25820                31577 4 +     41958 A--GAC
i Tadarida_brasiliensis.TadBra_scaffold_25820            C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_1782                 93912 4 +    116680 A--GAC
i Tamandua_tetradactyla.TamTet_scaffold_1782             C 0 C 0
s Tapirus_indicus.TapInd_scaffold_9301                      138744 4 -    156842 A--AAC
i Tapirus_indicus.TapInd_scaffold_9301                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_755                    407216 4 +    539355 A--AAC
i Tapirus_terrestris.TapTer_scaffold_755                 C 0 C 0
s Tarsius_lariang.k141_2201908                               50632 4 +     70052 A--GAA
i Tarsius_lariang.k141_2201908                           C 0 C 0
s Tarsius_wallacei.k141_722827                               15024 4 +     18080 A--GAT
i Tarsius_wallacei.k141_722827                           C 0 C 0
s Theropithecus_gelada.CM009954.1                        186466322 3 + 186847797 ---CAC
i Theropithecus_gelada.CM009954.1                        C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_62701               7521 4 -     21356 A-G-AG
i Thryonomys_swinderianus.ThrSwi_scaffold_62701          C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_41106                    5853 4 +     27660 G--GGC
i Tolypeutes_matacus.TolMat_scaffold_41106               I 6 C 0
s Tonatia_saurophila.TonSau_scaffold_294                    103779 4 +    610378 A--GAC
i Tonatia_saurophila.TonSau_scaffold_294                 I 5 C 0
s Trachypithecus_auratus.k141_95322                          12334 3 -     15799 ---GAT
i Trachypithecus_auratus.k141_95322                      I 8 C 0
s Trachypithecus_crepusculus.k141_539312                     25701 3 +     78344 ---GAT
i Trachypithecus_crepusculus.k141_539312                 I 8 C 0
s Trachypithecus_cristatus.k141_581431                       12505 3 -     15970 ---GAT
i Trachypithecus_cristatus.k141_581431                   I 8 C 0
s Trachypithecus_francoisi.k141_1453105                      11467 3 +     62838 ---GAT
i Trachypithecus_francoisi.k141_1453105                  I 8 C 0
s Trachypithecus_geei.k141_119873                            12432 3 -     17556 ---GAT
i Trachypithecus_geei.k141_119873                        I 8 C 0
s Trachypithecus_germaini.k141_545543                        12446 3 -     15912 ---GAT
i Trachypithecus_germaini.k141_545543                    I 8 C 0
s Trachypithecus_hatinhensis.k141_31479                      11396 3 +     64340 ---GAT
i Trachypithecus_hatinhensis.k141_31479                  I 8 C 0
s Trachypithecus_laotum.k141_928651                          12395 3 +     63452 ---GAT
i Trachypithecus_laotum.k141_928651                      I 8 C 0
s Trachypithecus_leucocephalus.k141_283481                   11470 3 +     21341 ---GAT
i Trachypithecus_leucocephalus.k141_283481               I 8 C 0
s Trachypithecus_melamera.k141_261742                         1532 3 +     11697 ---GAT
i Trachypithecus_melamera.k141_261742                    I 8 C 0
s Trachypithecus_obscurus.k141_170351                        13313 3 +     33539 ---GAT
i Trachypithecus_obscurus.k141_170351                    I 8 C 0
s Trachypithecus_phayrei.ctg124                            5965141 3 +   6242583 ---GAT
i Trachypithecus_phayrei.ctg124                          I 8 C 0
s Trachypithecus_pileatus.k141_583962                        13229 3 +     14028 ---GAT
i Trachypithecus_pileatus.k141_583962                    I 8 C 0
s Tragulus_javanicus.TraJav_scaffold_3462                     5033 4 +    200418 A--GAC
i Tragulus_javanicus.TraJav_scaffold_3462                C 0 C 0
s Trichechus_manatus.JH594705.1                            4313808 4 +  10818551 A--GAT
i Trichechus_manatus.JH594705.1                          C 0 C 0
s Tupaia_chinensis.KB320699.1                              2195112 4 +   4065304 A--GAC
i Tupaia_chinensis.KB320699.1                            C 0 I 128
s Tupaia_tana.TupTan_flattened_line_394                      25599 4 +     70247 A--GAC
i Tupaia_tana.TupTan_flattened_line_394                  C 0 C 0
s Tursiops_truncatus.MRVK01000835.1                       15765708 4 +  33153633 A--GAC
i Tursiops_truncatus.MRVK01000835.1                      C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_46687                     980 4 +     21056 A--GGT
i Uropsilus_gracilis.UroGra_scaffold_46687               C 0 C 0
s Ursus_maritimus.KK499267.1                               4878445 4 -   5085361 A--GAT
i Ursus_maritimus.KK499267.1                             C 0 C 0
s Varecia_rubra.k141_590885                                  31857 4 +     50397 A--AAT
i Varecia_rubra.k141_590885                              C 0 I 3
s Varecia_variegata.k141_1100575                              6946 4 +     25465 A--AAT
i Varecia_variegata.k141_1100575                         C 0 I 3
s Vicugna_pacos.KN270157.1                                 5390221 4 -   5488506 A--GTC
i Vicugna_pacos.KN270157.1                               C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_30954                 42975 4 -     43706 A--CAT
i Vulpes_lagopus.VulLag_flattened_line_30954             C 0 C 0
s Xerus_inauris.XerIna_scaffold_2302                         24827 4 +    224448 A--GAA
i Xerus_inauris.XerIna_scaffold_2302                     I 12 C 0
s Zalophus_californianus.ZalCal_flattened_line_17732         30030 4 +     86975 A--GAT
i Zalophus_californianus.ZalCal_flattened_line_17732     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_11398                      39113 4 +     63895 A--AGG
i Zapus_hudsonius.ZapHud_scaffold_11398                  C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_16896            21855 4 -     22999 A--GAC
i Ziphius_cavirostris.ZipCav_flattened_line_16896        C 0 C 0
e Microgale_talazaci.MicTal_scaffold_6613                    50091 11442 +    145209 I
e Elephantulus_edwardii.JH947257.1                         9114138 13034 -  10337057 I
e Solenodon_paradoxus.SolPar_flattened_line_126              23246 0 +   1910179 C
e Microtus_ochrogaster.CM001695.1                         15966960 2106 +  27267610 I
e Gorilla_beringei.k141_179627                                1068 289 +      1068 T

a score=0.000000
s hg38.chrUn_KI270755v1                                      11341 45 +     36723 GGGG-T-GTT--T--T--TA-CTTCC--------GCCCCAAA-------ACTT-----A--------C--A--CA--------TTTCA--C---TAA--A----A
s Acomys_cahirinus.AcoCah_scaffold_21377                     10882 40 -     63021 A-GG-T-ACT--T--C--AA-TATTA--------GCCACA------------TT----A--------T--G--TG--------TGTCA--C---TAA--A----A
i Acomys_cahirinus.AcoCah_scaffold_21377                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000098.1                    9538558 45 -  29979442 G-GA-C-TTT--G--T--CA-CTTTG--------TCCACAAA-------A-CTT----A--------T--A--TA--------TGCCC--C---TAA--AA---C
i Ailuropoda_melanoleuca.LNAT01000098.1                  C 0 C 0
s Ailurus_fulgens.LNAC01001112.1                            108000 45 -    347723 G-GA-T-TTT--A--G--CA-CTTCG--------TCCACAAA-------A-CTT----A--------T--A--TA--------CGTCT--C---TAA--AA---T
i Ailurus_fulgens.LNAC01001112.1                         C 0 C 0
s Allactaga_bullata.AllBul_scaffold_20030                     1570 46 +     61208 A-AG-C-TTT--A--GCACA-CTTCA--------ACCATAAA-------A-TT----GA--------T--G--CA--------TTTCA--C---TAA--A----A
i Allactaga_bullata.AllBul_scaffold_20030                C 0 C 0
s Allenopithecus_nigroviridis.k141_3361533                   40889 44 -     52922 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTG-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Allenopithecus_nigroviridis.k141_3361533               C 0 C 0
s Allochrocebus_lhoesti.k141_1932296                          7220 44 +     11307 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTT-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Allochrocebus_lhoesti.k141_1932296                     C 0 C 0
s Allochrocebus_preussi.k141_499905                           7392 44 -     13300 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTT-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Allochrocebus_preussi.k141_499905                      C 0 C 0
s Allochrocebus_solatus.k141_139760                           9273 44 +     12926 A-CC-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTT-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Allochrocebus_solatus.k141_139760                      C 0 C 0
s Alouatta_belzebul.k141_3560514                             31946 52 +     51355 A-AG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACATGTAC--A--CA--------CTTCA--A---GAA--A----A
i Alouatta_belzebul.k141_3560514                         C 0 C 0
s Alouatta_caraya.k141_1701091                               25092 52 -     36483 A-AG-T-TTT--T--C--TG-CTCTT--------GCTATAAA-------GCTT-----ACACATGTAC--A--CA--------CTTCA--A---GAA--A----A
i Alouatta_caraya.k141_1701091                           C 0 C 0
s Alouatta_discolor.k141_1945310                              7197 52 -     13496 A-AG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACATGTAC--A--CA--------CTTCA--A---GAA--A----A
i Alouatta_discolor.k141_1945310                         C 0 C 0
s Alouatta_juara.k141_1302312                                23979 52 +     27940 A-CG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACAAATGTAC--A--CA--------CTTCA--A---CAA--A----A
i Alouatta_juara.k141_1302312                            C 0 C 0
s Alouatta_macconnelli.k141_623179                           15787 52 -     39310 A-AG-T-TTT--T--C--TG-CTCTT--------GCTATAAA-------GCTT-----ACACATGTAC--A--CA--------CTTCA--A---GAA--A----A
i Alouatta_macconnelli.k141_623179                       C 0 C 0
s Alouatta_nigerrima.k141_1929159                            24045 52 +     30492 A-AG-T-TTT--T--C--TG-CTCTT--------GCTATAAA-------GCTT-----ACACATGTAC--A--CA--------CTTCA--A---GAA--A----A
i Alouatta_nigerrima.k141_1929159                        C 0 C 0
s Alouatta_palliata.k141_2135620                             28248 52 +     47717 A-AG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACATGTAC--A--CA--------GTTCA--A---GAA--A----A
i Alouatta_palliata.k141_2135620                         C 0 C 0
s Alouatta_puruensis.k141_2029433                            79248 52 +     87306 A-CG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACATGTAC--A--CA--------CTTCA--A---CAA--A----A
i Alouatta_puruensis.k141_2029433                        C 0 C 0
s Alouatta_seniculus.k141_117119                             39230 52 +     50774 A-TG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACATGTAC--A--CA--------CTTCA--A---CAA--A----A
i Alouatta_seniculus.k141_117119                         C 0 C 0
s Ammotragus_lervia.NIVO01071767.1                          707963 45 -   2318259 T-GG-C-TTT--T--T--TA-ATTTG--------ATCACAAA-------A-CTT----A--------C--A--CC--------CTTCC--C---TAA--A---GA
i Ammotragus_lervia.NIVO01071767.1                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_1412                      209551 43 +    412891 A-GT-C-TTC--T--T--A--TTTCA--------GCCACAAA-------A-CTT----A--------C--A--CT--------CTTCC--C---TAA--A----A
i Anoura_caudifer.AnoCau_scaffold_1412                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_43303             27192 45 -     32520 A-GG-C-TTT--T--T--AA-ATTTG--------ATCACAAA-------A-CTT----A--------C--A--CC--------CTTCC--C---TAA--A---GA
i Antilocapra_americana.AntAmePen_scaffold_43303         C 0 C 0
s Aotus_azarae.k141_2596348                                   5477 52 +     12024 A-GG-T-TTT--T--C--TG-CTGTT--------GCTACAAA-------GCTT-----ACACACATAC--A--CA--------CTTCA--A---GAA--A----A
i Aotus_azarae.k141_2596348                              C 0 C 0
s Aotus_griseimembra.k141_2227177                             5144 52 -     10972 A-GG-T-TTT--T--C--TG-CTGTT--------GCTACAAA-------GCTT-----ACACACGTAC--A--CA--------CTTCA--A---GAA--A----A
i Aotus_griseimembra.k141_2227177                        C 0 C 0
s Aotus_nancymaae.KZ198451.1                               4333605 52 -   5030052 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACACGTAC--A--CA--------CTTCA--A---GAA--A----A
i Aotus_nancymaae.KZ198451.1                             C 0 C 0
s Aotus_trivirgatus.k141_1801223                              5537 52 -     12698 A-GG-T-TTT--T--C--TG-CTGTT--------GCTACAAA-------GCTT-----ACACACGTAC--A--CA--------CTTCA--A---GAA--A----A
i Aotus_trivirgatus.k141_1801223                         C 0 C 0
s Aotus_vociferans.k141_506037                                4997 52 -     11998 A-GG-T-TTT--T--C--TG-CTGTT--------GCTACAAA-------GCTT-----ACACACGTAC--A--CA--------CTTCA--A---GAA--A----A
i Aotus_vociferans.k141_506037                           C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_37633                      22389 43 +     39421 G-GA-C-TTT--C--T--TA-CTTTT--------GCCAAA-A-------A-CTT----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Aplodontia_rufa.AprRuf_scaffold_37633                  C 0 C 0
s Arctocebus_calabarensis.k141_1364444                       14459 44 +     45910 T-GGAC-TTT--T--T--TA-CTTTG--------GCCACAAA-------T-AC-----A--------C--A--CA--------CTTCA--C---TAC--A----A
i Arctocebus_calabarensis.k141_1364444                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_25439                 27001 43 +     43469 A-GG-C-TTC--T--T--A--CTTTG--------GCCACAAA-------A-CTT----A--------T--A--CC--------CTTCC--C---TAA--A----A
i Artibeus_jamaicensis.ArtJam_scaffold_25439             C 0 C 0
s Ateles_geoffroyi_b.tarseq_1536                             21232241 52 -  21539123 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACACGTAC--A--CA--------CTTCA--A---GAA--A----A
i Ateles_geoffroyi_b.tarseq_1536                            C 0 C 0
s Ateles_belzebuth.k141_1572163                               3313 52 -     48076 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACACGTAC--A--CA--------CTTCA--A---GAA--A----A
i Ateles_belzebuth.k141_1572163                          C 0 C 0
s Ateles_chamek.k141_2083276                                 18779 52 -     22344 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACACGTAC--A--CA--------CTTCA--A---GAA--A----A
i Ateles_chamek.k141_2083276                             C 0 C 0
s Ateles_geoffroyi_a.k141_833924                               31835 52 -     89868 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACACGTAC--A--CA--------CTTCA--A---GAA--A----A
i Ateles_geoffroyi_a.k141_833924                           C 0 C 0
s Ateles_marginatus.k141_803263                              36248 52 -     40414 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACACGTAC--A--CA--------CTTCA--A---GAA--A----A
i Ateles_marginatus.k141_803263                          C 0 C 0
s Ateles_paniscus.k141_457735                                44082 52 +     72325 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACACGTAC--A--CA--------CTTCA--A---GAA--A----A
i Ateles_paniscus.k141_457735                            C 0 C 0
s Avahi_laniger.k141_765380                                  75848 39 -     92717 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTTCT--C---TAA--A----A
i Avahi_laniger.k141_765380                              I 3 C 0
s Avahi_peyrierasi.k141_1424874                              76431 39 +     85213 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTTCT--C---TAA--A----A
i Avahi_peyrierasi.k141_1424874                          I 3 C 0
s Balaenoptera_acutorostrata.KI537508.1                   15222624 45 +  23207421 A-GG-C-TTT--T--T--TA-CTTTA--------GTCACAAA-------A-CTT----A--------C--A--CT--------CTTCC--C---TAA--AA---T
i Balaenoptera_acutorostrata.KI537508.1                  C 0 C 0
s Balaenoptera_bonaerensis.DF411050.1                         4627 45 +     25979 A-GA-C-TTT--T--T--TA-CTTTA--------GTCACAAA-------A-CTT----A--------C--A--CT--------CTTCC--C---TAA--AA---T
i Balaenoptera_bonaerensis.DF411050.1                    C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_7278                     13021 45 -    124022 A-GG-C-TTT--T--T--TA-ATTTG--------ATTACAAA-------A-CTT----A--------C--A--CC--------CTTCC--C---TAA--A---GA
i Beatragus_hunteri.BeaHun_scaffold_7278                 C 0 C 0
s Bison_bison.KN261452.1                                    233199 45 -    288883 A-TG-C-TTT--T--T--TA-ATTTG--------ATCACAAA-------A-CTT----A--------C--A--CC--------CTTTC--T---TAA--A---GA
i Bison_bison.KN261452.1                                 C 0 C 0
s Bos_indicus.CM003047.1                                  20306574 45 +  48749331 A-GG-C-TTT--T--T--TA-ATTTG--------ATCACAAA-------A-CTT----A--------C--A--CC--------CTTTC--T---TAA--A---GA
i Bos_indicus.CM003047.1                                 C 0 C 0
s Bos_mutus.JH880303.1                                     1159676 45 -   1948126 A-GG-C-TTT--T--T--TA-ATTTG--------ATCACAAA-------A-CTT----A--------C--A--CC--------CTTTC--T---TAA--A---GA
i Bos_mutus.JH880303.1                                   C 0 C 0
s Bos_taurus.CM000203.6                                   18116786 45 +  45695690 A-GG-C-TTT--T--T--TA-ATTTG--------ATCACAAA-------A-CTT----A--------C--A--CC--------CTTTC--T---TAA--A---GA
i Bos_taurus.CM000203.6                                  C 0 C 0
s Bubalus_bubalis.KI419123.1                               2852241 45 +   4408762 A-GG-C-TTT--T--T--TA-ATTTG--------ATCACAAA-------A-CTT----A--------C--A--CC--------CTTCC--C---TAA--A---GA
i Bubalus_bubalis.KI419123.1                             C 0 C 0
s Cacajao_ayresi.k141_552049                                117104 44 -    122966 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTC-----A--------C--A--CA--------CTACA--G---TAA--A----A
i Cacajao_ayresi.k141_552049                             C 0 C 0
s Cacajao_calvus.k141_5142                                   76582 44 +     81800 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTC-----A--------C--A--CA--------CTACA--G---TAA--A----A
i Cacajao_calvus.k141_5142                               C 0 C 0
s Cacajao_hosomi.k141_81245                                  45787 44 -     95584 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------CCTC-----A--------C--A--CA--------CTACA--G---TAA--A----A
i Cacajao_hosomi.k141_81245                              C 0 C 0
s Cacajao_melanocephalus.k141_619699                         69882 44 -    119600 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------CCTC-----A--------C--A--CA--------CTACA--G---TAA--A----A
i Cacajao_melanocephalus.k141_619699                     C 0 C 0
s Camelus_bactrianus.KN276810.1                           10020610 45 -  17673402 A-GG-C-CTT--T--T--TA-CTTTG--------GTGGCAAA-------A-CTT----A--------C--A--TC--------CTTCC--C---GAA--AA---C
i Camelus_bactrianus.KN276810.1                          C 0 C 0
s Camelus_dromedarius.KN272107.1                           2353440 45 -   7040546 A-GG-C-CTT--T--T--TA-CTTTG--------GTGGCAAA-------A-CTT----A--------C--A--TC--------CTTCC--C---GAA--AA---C
i Camelus_dromedarius.KN272107.1                         C 0 C 0
s Camelus_ferus.KB017975.1                                  421699 45 -   1652518 A-GG-C-CTT--T--T--TA-CTTTG--------GTGGCAAA-------A-CTT----A--------C--A--TC--------CTTCC--C---GAA--AA---C
i Camelus_ferus.KB017975.1                               C 0 C 0
s CanFam4.chr16                                           17831902 45 -  60362399 G-GG-C-TTT--G--T--CC-CTTTG--------TCCACAAA-------A-CTT----T--------T--A--TA--------CTTCC--C---TAA--AA---T
i CanFam4.chr16                                          C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_27089                    32646 45 -     43241 G-GG-C-TTT--G--T--CC-CTTTG--------TCCACAAA-------A-CTT----T--------T--A--TA--------CTTCC--C---TAA--AA---T
i Canis_lupus_VD.CanFam_VD_scaffold_27089                C 0 C 0
s Canis_lupus_dingo.QKWQ01000480.1                         9067370 45 -   9314153 G-GG-C-TTT--G--T--CC-CTTTG--------TCCACAAA-------A-CTT----T--------T--A--TA--------CTTCC--C---TAA--AA---T
i Canis_lupus_dingo.QKWQ01000480.1                       C 0 C 0
s Canis_lupus_familiaris.chr16                            17992029 45 -  59632846 G-GG-C-TTT--G--T--CC-CTTTG--------TCCACAAA-------A-CTT----T--------T--A--TA--------CTTCC--C---TAA--AA---T
i Canis_lupus_familiaris.chr16                           C 0 C 0
s Canis_lupus_orion.HG994398.1                            18533135 45 +  63665305 G-GG-C-TTT--G--T--CC-CTTTG--------TCCACAAA-------A-CTT----T--------T--A--TA--------CTTCC--C---TAA--AA---T
i Canis_lupus_orion.HG994398.1                           C 0 C 0
s Capra_aegagrus.CM003241.1                               18862026 45 +  46296322 T-GG-C-TTT--T--T--AA-ATTTG--------ATCACAAA-------A-CTT----A--------C--A--CC--------CTTCC--C---TAA--A---GA
i Capra_aegagrus.CM003241.1                              C 0 C 0
s Capra_hircus.CM004588.1                                 18092736 45 -  44709034 T-GG-C-TTT--T--T--AA-ATTTG--------ATCACAAA-------A-CTT----A--------C--A--CC--------CTTCC--C---TAA--A---GA
i Capra_hircus.CM004588.1                                C 0 C 0
s Capromys_pilorides.CapPil_scaffold_118970                   7456 33 -      8274 A--A-C-TTC--G--T--TA-CTCTT--------ATCATCCA-------A-TTT----A--------T--A--GA--------C---------------------
i Capromys_pilorides.CapPil_scaffold_118970              C 0 I 6
s Carlito_syrichta.NW_007259797.1                           180059 44 -    496798 G-GT-C-ATT--T--T--TA-CTTTG--------TCCACGAA-------ACAC-----A--------C--A--TC--------TTCCA--C---TAA--G----A
i Carlito_syrichta.NW_007259797.1                        C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_737331                476 43 -       918 A-GG-C-TTC--T--T--A--CTTTG--------GCCACAAA-------A-CGT----A--------C--A--CC--------CTTCC--C---TAA--A----A
i Carollia_perspicillata.CarPer_scaffold_737331          C 0 C 0
s Castor_canadensis.CasCan_scaffold_2074                    167285 44 +    179628 A-GG-C-TTT--C--C--TA-GTTTT--------GCCACAAA-------A-TTT----A--------T--A--CA--------CTTCT--C---TAA--A----G
i Castor_canadensis.CasCan_scaffold_2074                 C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_2839                    113846 45 +    217609 A-GG-C-CAT--T--A--TA-CTTTG--------GCCACAAG-------A-CTT----A--------C--A--CC--------CTTTC--T---TAA--AA---T
i Catagonus_wagneri.CatWag_scaffold_2839                 C 0 C 0
s Cavia_aperea.AVPZ01000300.1                             18367708 45 -  23392119 A-GT-T-TGT--C--T--TA-CTCTT--------ACCACCCA-------A-TTT----A--------C--a--ga--------ctttg--c---ttt--t---ta
i Cavia_aperea.AVPZ01000300.1                            C 0 I 2
s Cavia_porcellus.DS562891.1                              18379973 45 -  23407841 A-GT-T-TGT--C--T--TA-CTCTT--------ACCACCCA-------A-TTT----A--------c--a--ga--------ctttg--t---ttt--t---ta
i Cavia_porcellus.DS562891.1                             C 0 I 2
s Cavia_tschudii.CavTsc_scaffold_8919                       118816 45 +    143979 A-GT-T-TGT--C--T--TA-CTCTT--------ACCACCCA-------A-TTT----A--------C--A--GA--------CTTTG--T---TTT--T---TA
i Cavia_tschudii.CavTsc_scaffold_8919                    C 0 I 2
s Cebus_albifrons.Contig27                                25675726 52 +  26074798 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACACCTAC--A--CA--------CTTCA--A---GAA--A----A
i Cebus_albifrons.Contig27                               C 0 C 0
s Cebus_olivaceus.k141_1764483                               22194 52 +     28840 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACACCTAC--A--CA--------CTTCA--A---GAA--A----A
i Cebus_olivaceus.k141_1764483                           C 0 C 0
s Cebus_unicolor.k141_547207                                  7865 52 +     13997 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACACCTAC--A--CA--------CTTCA--A---GAA--A----A
i Cebus_unicolor.k141_547207                             C 0 C 0
s Cephalopachus_bancanus.k141_1423433                        29983 44 +     31688 G-GT-C-ATT--T--T--TA-CTTTG--------TCCACGAA-------ACAC-----A--------C--G--TC--------TTCCA--C---TAA--G----A
i Cephalopachus_bancanus.k141_1423433                    C 0 C 0
s Ceratotherium_simum.JH767749.1                          12257394 29 +  27778364 G-GG-C-TTT--T--T--TA-CTCTG--------GCCACAAA-------A-CTT----A----------------------------------------------
i Ceratotherium_simum.JH767749.1                         C 0 I 17
s Ceratotherium_simum_cottoni.CerCot_scaffold_105296          3101 29 +     15641 G-GG-C-TTT--T--T--TA-CTCTG--------GCCACAAA-------A-CTT----A----------------------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_105296     C 0 I 17
s Cercocebus_atys.KQ010504.1                               4501869 28 +   4669795 A-CT-T-GCT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Cercocebus_atys.KQ010504.1                             C 0 I 15
s Cercocebus_chrysogaster.k141_2766003                       23141 28 -     30935 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Cercocebus_chrysogaster.k141_2766003                   C 0 I 15
s Cercocebus_lunulatus.k141_245046                            7543 28 +     18174 A-CT-T-GCT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Cercocebus_lunulatus.k141_245046                       C 0 I 15
s Cercocebus_torquatus.k141_4063387                           7380 28 +     18249 A-CT-T-GCT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Cercocebus_torquatus.k141_4063387                      C 0 I 15
s Cercopithecus_ascanius.k141_4281816                         2502 44 -      5884 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTG-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Cercopithecus_ascanius.k141_4281816                    C 0 C 0
s Cercopithecus_cephus.k141_1630443                           1526 44 +      4620 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTG-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Cercopithecus_cephus.k141_1630443                      C 0 C 0
s Cercopithecus_diana.k141_488174                             7962 44 +     10982 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTG-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Cercopithecus_diana.k141_488174                        C 0 C 0
s Cercopithecus_hamlyni.k141_1302205                          1508 44 +      4810 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTG-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Cercopithecus_hamlyni.k141_1302205                     C 0 C 0
s Cercopithecus_lowei.k141_4082698                            7424 44 +     34178 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTG-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Cercopithecus_lowei.k141_4082698                       C 0 C 0
s Cercopithecus_albogularis.ctg5                                38849534 44 +  39242232 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTG-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Cercopithecus_albogularis.ctg5                               C 0 C 0
s Cercopithecus_mona.ctg39                                21253152 26 -  21565898 ------------------------------------CACAAA-------ACTG-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Cercopithecus_mona.ctg39                               T 3175 I 3190
s Cercopithecus_neglectus.k141_557928                         7590 44 -     18401 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTG-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Cercopithecus_neglectus.k141_557928                    C 0 C 0
s Cercopithecus_nictitans.k141_1200139                        7653 44 -     15013 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTG-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Cercopithecus_nictitans.k141_1200139                   C 0 C 0
s Cercopithecus_petaurista.k141_365908                        7624 44 +     11214 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTG-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Cercopithecus_petaurista.k141_365908                   C 0 C 0
s Cercopithecus_pogonias.k141_391400                          2444 44 -     13831 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------AGTG-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Cercopithecus_pogonias.k141_391400                     C 0 C 0
s Cercopithecus_roloway.k141_1248991                         27618 44 +     68532 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTG-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Cercopithecus_roloway.k141_1248991                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_965163             680 15 -      1897 --AG-C-TTT--T--T--CA-CATTG-------------------------------------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_965163       C 0 C 0
s Cheirogaleus_major.k141_333249                             43839 39 -     52598 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Cheirogaleus_major.k141_333249                         I 3 C 0
s Cheirogaleus_medius.k141_1055463                           39170 39 +     57038 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Cheirogaleus_medius.k141_1055463                       I 3 C 0
s Cheracebus_lucifer.k141_49986                              10000 44 -     17098 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTC-----A--------C--A--CA--------CTACA--G---TGA--A----A
i Cheracebus_lucifer.k141_49986                          C 0 C 0
s Cheracebus_lugens.k141_1393925                              9870 44 +     17877 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTC-----A--------C--A--CA--------CTACA--G---TGA--A----A
i Cheracebus_lugens.k141_1393925                         C 0 C 0
s Cheracebus_regulus.k141_471822                            167437 44 -    216457 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTC-----A--------C--A--CA--------CTACA--G---TGA--A----A
i Cheracebus_regulus.k141_471822                         C 0 C 0
s Cheracebus_torquatus.k141_1170026                          71910 44 +     76511 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTC-----A--------C--A--CA--------CTACA--G---TGA--A----A
i Cheracebus_torquatus.k141_1170026                      C 0 C 0
s Chinchilla_lanigera.JH722012.1                           1276245 43 +   2543920 A-GG-T-TTT--C--T--TA-CTCTT--------ACCACCCA-------A-TTT----A--------T--G--GA--------CTTTA--C---T----AA---A
i Chinchilla_lanigera.JH722012.1                         C 0 I 2
s Chiropotes_israelita.k141_747660                          114129 44 +    146308 A-GC-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTC-----A--------C--A--CA--------CTACA--G---TAA--A----A
i Chiropotes_israelita.k141_747660                       C 0 C 0
s Chiropotes_sagulatus.k141_1421488                          46037 44 -     50570 A-GC-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTC-----A--------C--A--CA--------CTACA--G---TAA--A----A
i Chiropotes_sagulatus.k141_1421488                      C 0 C 0
s Chlorocebus_aethiops.ctg25                              18455402 44 -  18827391 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTT-----A--------G--A--CA--------CTTCA--C---TAA--A----G
i Chlorocebus_aethiops.ctg25                             C 0 C 0
s Chlorocebus_pygerythrus.k141_1025673                       41345 44 -     50209 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTT-----A--------G--A--CA--------CTTCA--C---TAA--A----G
i Chlorocebus_pygerythrus.k141_1025673                   C 0 C 0
s Chlorocebus_sabaeus.CM001947.1                         135448327 44 + 135778131 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTT-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Chlorocebus_sabaeus.CM001947.1                         C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_22546                   977 27 -     25429 A-GG-C-TTT--T--C--CA-CGTGG--------GCCACAAA-------A-TT----------------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_22546             C 0 I 15
s Choloepus_hoffmanni.KN194906.1                            196108 27 +    839153 A-GG-C-TTT--T--C--CA-CGTGG--------GCCACAAA-------A-TT----------------------------------------------------
i Choloepus_hoffmanni.KN194906.1                         C 0 I 15
s Chrysochloris_asiatica.ChrAsi_scaffold_207869               7062 35 -      9651 -------------------G-CTTTG--------GCCACAAA-------A-CGTA---C--------C--A--CA--------CTTCA--C---TAA--A----A
i Chrysochloris_asiatica.ChrAsi_scaffold_207869          I 7 I 2
s Colobus_angolensis.KN981557.1                            1936269 44 +   2368649 C-CT-T-GTT--T--T--TA-CTTTA--------GCCACAAA-------ACTT-----C--------G--A--CA--------CTTCA--C---TAA--A----A
i Colobus_angolensis.KN981557.1                          C 0 C 0
s Colobus_guereza.LG01                                   199970247 44 + 200372422 C-CT-T-GTT--T--T--TA-CTTTA--------GCCACAAA-------ACTT-----C--------G--A--CA--------CTTCA--C---TAA--A----A
i Colobus_guereza.LG01                                   C 0 C 0
s Colobus_polykomos.k141_906115                              58561 44 +     84244 C-CT-T-GTT--T--T--TA-CTTTA--------GCCACAAA-------ACTT-----C--------G--A--CA--------CTTCA--C---TAA--A----A
i Colobus_polykomos.k141_906115                          C 0 C 0
s Condylura_cristata.JH655891.1                           17567021 44 -  53390261 G-AG-C-TTT--T--T--TA-CCTTG--------GCTACAAA-------A-CTT----A--------C--A--TA--------CTTCC--A---TAA--A----A
i Condylura_cristata.JH655891.1                          C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_153350           163 47 +      5041 A-GG-C-TTT--T--T--AA-TTTTG--------GCCACAGA-------A-TTT----G--------C--A--CA--------CATCC--TTCCTAA--T----A
i Craseonycteris_thonglongyai.CraTho_scaffold_153350     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_14425                 16793 40 +     83289 A-GG-C-TTT--C--C--TA-CATTG--------GCCACA------------TT----A--------T--A--AA--------CATCA--C---TAA--A----A
i Cricetomys_gambianus.CriGam_scaffold_14425             C 0 C 0
s Cricetulus_griseus.LT883664.1                           11697420 40 + 224834208 A-GA-T-TTT--A--T--TG-CATTA--------GTCACA------------T----CA--------T--G--TA--------CATCT--C---TGA--A----A
i Cricetulus_griseus.LT883664.1                          C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_522851               183 45 +      2245 G-GG-C-TTT--T--G--CA-CTTGA--------CCAAAAAA-------A-AAT----A--------T--AC-CA--------CTTAC--A---GAG--A----T
i Crocidura_indochinensis.CroInd_scaffold_522851         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_16129             59582 45 -     87169 G-GG-C-TTT--T--T--CA-TTTTG--------GCCACAAA-------A-CTT----A--------C--A--TA--------CTCCC--C---TAA--CA---T
i Cryptoprocta_ferox.CryFer_flattened_line_16129         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_65                    860022 44 +   1526836 T-GG-C-TTT--C--A--TA-CTGTT--------GTCACAAA-------A-CTT----A--------C--A--CA--------CATCA--C---TAA--A----A
i Ctenodactylus_gundi.CteGun_scaffold_65                 C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_30159                   6487 42 -     50838 A--G-C-TTT--C--T--TA-CTCTT--------ATCATCCA-------A-TT----CA--------C--A--AA--------CTTTA--C---T----TA---A
i Ctenomys_sociabilis.CteSoc_scaffold_30159              C 0 I 2
s Cuniculus_paca.CunPac_flattened_line_167855                 1782 48 +      7355 A-GA-TTTTT--C--T--TA-CTCTT--------ACTAACCA-------A-TTT----G--------C--A--GA--------CTTTA--C---TTTAAAA---A
i Cuniculus_paca.CunPac_flattened_line_167855            C 0 I 2
s Dasyprocta_punctata.DasPun_flattened_line_15900            19100 45 -     75252 A-GA-C-TGT--C--T--TA-CTCTT--------ACCACCCA-------A-TTT----A--------C--A--GA--------CTTTA--C---TTA--AA---A
i Dasyprocta_punctata.DasPun_flattened_line_15900        C 0 I 2
s Dasypus_novemcinctus.JH564415.1                            93215 22 +   2246927 G-AT-C-CTT--T--T--CA-CACGG--------GCCCCA-----------------------------------------------------------------
i Dasypus_novemcinctus.JH564415.1                        C 0 I 2
s Daubentonia_madagascariensis.ctg71                      12562598 38 -  12879189 -------CTT--T--T--TA-CTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Daubentonia_madagascariensis.ctg71                     I 3 C 0
s Delphinapterus_leucas.KZ290073.1                        16841775 45 +  35494412 A-GG-T-TTT--T--T--TA-CTTTG--------GTCACGAA-------A-CTT----A--------C--A--CT--------CTTCC--C---TAA--AA---T
i Delphinapterus_leucas.KZ290073.1                       C 0 C 0
s Desmodus_rotundus.KZ672289.1                             8650492 43 +  20541912 A-GG-C-TTC--T--T--A--CTTTG--------GCCACAAA-------A-CTT----A--------C--A--TC--------CTTCC--T---TAA--A----A
i Desmodus_rotundus.KZ672289.1                           C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010002091.1                  699189 29 +   1390856 G-GG-C-TTT--T--T--CA-CTCTG--------GCCACAAA-------A-CTT----A----------------------------------------------
i Dicerorhinus_sumatrensis.PEKH010002091.1               C 0 I 17
s Diceros_bicornis.DicBicMic_scaffold_5955                   31992 29 +    198055 G-GG-C-TTT--T--T--TA-CTCTG--------GCCACAAA-------A-CTT----A----------------------------------------------
i Diceros_bicornis.DicBicMic_scaffold_5955               C 0 I 17
s Dinomys_branickii.DinBra_scaffold_21862                    59986 43 +     67921 A-GG-T-TTT--C--T--TA-CTCTT--------ACCACCCA-------A-TTT----A--------C--A--GA--------CCTTA--C---T----AA---A
i Dinomys_branickii.DinBra_scaffold_21862                C 0 I 2
s Dipodomys_ordii.KN672350.1                              18914806 44 +  37912305 A-GA-T-TTT--C--C--TA-CTTTT--------ACGATAAC-------A-TTT----A--------C--A--CA--------CTTTC--T---TAA--A----G
i Dipodomys_ordii.KN672350.1                             C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_47531                  13404 44 -     26976 A-GA-T-TTC--C--C--TA-CTTTT--------ACGATAAC-------A-TTT----A--------C--A--CA--------CTTTC--T---TAA--A----G
i Dipodomys_stephensi.DipSte_scaffold_47531              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_260697                 1722 42 +      2313 A-TA-C-TGT--C--T--TT-CTCTT--------ACCACCTA-------A-TTT----A--------G--A--GA--------CTTTG--C---TTT--------
i Dolichotis_patagonum.DolPat_scaffold_260697            C 0 I 4
s Eidolon_helvum.KE797349.1                                  19395 46 -     31197 a-ga-c-tttttt--t--ta-ccTTG--------ACCACAAA-------A-CTT----G--------C--A--CC--------CTTCC--T---TAA--A----A
i Eidolon_helvum.KE797349.1                              C 0 C 0
s Elaphurus_davidianus.JRFZ01104969.1                       342199 45 +    607251 A-GG-C-TTT--T--T--TA-ATTTG--------ATCACAAA-------A-CTT----A--------C--A--CC--------CTTCC--C---TAA--A---GA
i Elaphurus_davidianus.JRFZ01104969.1                    C 0 C 0
s Ellobius_lutescens.LOEQ01008920.1                          47812 40 -    110024 A-AT-T-TTT--C--C--TA-CATTA--------GCCACC------------TT----A--------T--A--CA--------CATCA--C---TAA--A----A
i Ellobius_lutescens.LOEQ01008920.1                      C 0 C 0
s Ellobius_talpinus.LOJH01050844.1                            9063 40 +     12610 A-GT-C-TTT--C--C--TA-CATTA--------GCCACC------------TT----A--------T--A--CA--------CATCA--C---TAA--A----A
i Ellobius_talpinus.LOJH01050844.1                       C 0 C 0
s Enhydra_lutris.KZ291758.1                               16365899 45 -  41312741 G-GG-T-TTT--G--C--CA-CTTTG--------TCCACAAA-------A-CAT----A--------T--A--TA--------CATCC--C---TAC--AA---T
i Enhydra_lutris.KZ291758.1                              C 0 C 0
s Equus_asinus.JREZ01000139.1                              1310513 44 +   4378816 A-GG-C-TTT--T--T--C--CTTTG--------GTCACAAA-------T-CTT----A--------C--A--CC--------CTTCC--C---TAA--AA---T
i Equus_asinus.JREZ01000139.1                            C 0 C 0
s Equus_caballus.CM000403.2                               18557982 44 -  39960074 A-GG-C-TTT--T--T--C--CTTTG--------GTCACAAA-------T-CTT----A--------C--A--CC--------CTTCC--C---TAA--AA---T
i Equus_caballus.CM000403.2                              C 0 C 0
s Equus_przewalskii.KK951119.1                               60023 44 +    498745 A-GG-C-TTT--T--T--C--CTTTG--------GTCACAAA-------T-CTT----A--------C--A--CC--------CTTCC--C---TAA--AA---T
i Equus_przewalskii.KK951119.1                           C 0 C 0
s Erinaceus_europaeus.JH835339.1                           3365551 46 -   7059049 A-GA-C-TTT--T--T--CA-CATTT--------CCCACAAA-------A-CTT----A--------G--C-ACAC-------TTCCC--T---TAA--A----T
i Erinaceus_europaeus.JH835339.1                         C 0 C 0
s Erythrocebus_patas.Contig38                             21235405 27 -  21539334 -----------------------------------CCACAAA-------ACTT-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Erythrocebus_patas.Contig38                            T 2203 I 2219
s Eschrichtius_robustus.EscRob_flattened_line_8968           40948 45 +    133382 A-GG-C-TTT--T--T--TA-CTTTG--------GTCACAAA-------A-CTT----A--------C--A--CT--------CTTCC--C---TAA--AA---T
i Eschrichtius_robustus.EscRob_flattened_line_8968       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_57114              5250 45 -     25849 A-GG-C-TTT--T--T--TA-CTTTG--------GTCACAAA-------A-CTT----A--------C--A--CT--------CTTCC--C---TAA--AA---T
i Eubalaena_japonica.EubJap_flattened_line_57114         C 0 C 0
s Eulemur_albifrons.k141_1869827                             12958 39 -     21348 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Eulemur_albifrons.k141_1869827                         I 3 C 0
s Eulemur_collaris.k141_601111                               10158 39 +     70999 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Eulemur_collaris.k141_601111                           I 3 C 0
s Eulemur_coronatus.k141_384460                               7897 43 -    112731 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CAC---ACT-CTTCA--C---TAA--A----A
i Eulemur_coronatus.k141_384460                          I 3 C 0
s Eulemur_flavifrons.k141_433119                              6907 39 -     68309 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Eulemur_flavifrons.k141_433119                         I 3 C 0
s Eulemur_fulvus.k141_2627385                                 4043 39 -      9374 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Eulemur_fulvus.k141_2627385                            I 3 C 0
s Eulemur_macaco.k141_1562045                                33138 39 +     75513 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Eulemur_macaco.k141_1562045                            I 3 C 0
s Eulemur_mongoz.k141_232305                                 31023 39 +     97555 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Eulemur_mongoz.k141_232305                             I 3 C 0
s Eulemur_rubriventer.k141_1423786                            7678 39 -     30972 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Eulemur_rubriventer.k141_1423786                       I 3 C 0
s Eulemur_rufus.k141_1120150                                  7555 39 +     16616 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Eulemur_rufus.k141_1120150                             I 3 C 0
s Eulemur_sanfordi.k141_1122526                              34142 39 +    111500 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Eulemur_sanfordi.k141_1122526                          I 3 C 0
s Fukomys_damarensis.KN121974.1                             872434 45 +   3816255 A-GG-G-TTT--C--T--TA-CTCTT--------ACCACCTA-------A-TTT----A--------C--A--ga--------cttta--c---taa--a---at
i Fukomys_damarensis.KN121974.1                          C 0 I 2
s Galago_moholi.ctg3793                                        944 44 +    137831 T-GGGC-TTT--T--T--TA-CTTTG--------GCCACAAA-------A-AC-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Galago_moholi.ctg3793                                  C 0 C 0
s Galago_senegalensis.k141_991736                             2060 44 -     22493 T-GGGC-TTT--T--T--TA-CTTTG--------GCCACAAA-------A-AC-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Galago_senegalensis.k141_991736                        C 0 C 0
s Galagoides_demidoff.k141_561628                              181 44 +     32986 T-GGGC-TTT--T--T--TA-CTTTG--------GCCACAAA-------A-AC-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Galagoides_demidoff.k141_561628                        C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_75343               16026 44 -     17176 G-GG-C-TTT--T--T--TA-CTTTG--------GCCAAAAA-------A-ATT----A--------C--A--TA--------CTCTA--C---TAA--A----A
i Galeopterus_variegatus.GalVar_scaffold_75343           C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S007888.1                     637056 46 -    660261 A-GG-C-TTT--T--T--TA-ATTTG--------ATCACAAA-------A-CTTA---A--------C--A--CT--------CTTCC--C---TAA--A---GA
i Giraffa_tippelskirchi.LVKQ01S007888.1                  C 0 C 0
s Glis_glis.GliGli_scaffold_149316                            5373 43 +      8016 T-GG-C-TTT--C--A--TA-CTTTT--------GACCCA-A-------A-TCT----A--------C--A--CA--------CTTCA--T---TAA--A----A
i Glis_glis.GliGli_scaffold_149316                       C 0 C 0
s Gorilla_gorilla.LT578341.1                             186365222 45 + 186649187 GGGG-T-GTT--T--T--TA-CTTCC--------GCCCCAAA-------ACTT-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Gorilla_gorilla.LT578341.1                             C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_10447                   55128 43 +     78134 T-GG-C-TTT--A--A--TA-CTTTT--------GACCCA-A-------A-CCT----A--------C--A--CA--------CCTCA--T---TAA--A----A
i Graphiurus_murinus.GraMur_scaffold_10447               C 0 C 0
s Hapalemur_alaotrensis.k141_330369                           7552 39 +     40692 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTGCA--C---TAA--A----A
i Hapalemur_alaotrensis.k141_330369                      I 3 C 0
s Hapalemur_gilberti.k141_435261                             17240 39 +     22537 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTGCA--C---TAA--A----A
i Hapalemur_gilberti.k141_435261                         I 3 C 0
s Hapalemur_griseus.k141_679418                              15887 39 -     28566 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTGCA--C---TAA--A----A
i Hapalemur_griseus.k141_679418                          I 3 C 0
s Hapalemur_meridionalis.k141_258450                         14619 39 +     42923 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTGCA--C---TAA--A----A
i Hapalemur_meridionalis.k141_258450                     I 3 C 0
s Hapalemur_occidentalis.k141_578367                         17874 39 +     53142 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CA--------CTGCA--C---TAA--A----A
i Hapalemur_occidentalis.k141_578367                     I 3 C 0
s Helogale_parvula.HelPar_flattened_line_2585               273271 45 +    327341 G-GG-C-TTT--C--T--CA-CTTTG--------GCCACAAA-------A-CCT----A--------C--A--TA--------ACTCC--C---TAA--AA---T
i Helogale_parvula.HelPar_flattened_line_2585            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_35685                 14746 45 -     48891 T-GG-C-TTT--T--T--AA-ATTTG--------ATCACAAA-------A-CTT----A--------C--A--CC--------CTTCC--C---TAA--A---GA
i Hemitragus_hylocrius.HemHyl_scaffold_35685             C 0 C 0
s Heterocephalus_glaber.JH602082.1                        20686885 45 +  22651954 A-GG-T-TTT--C--T--TA-CTCTT--------ACCACCCA-------A-TTT----A--------A--A--GA--------CTTTA--C---TAA--AA---A
i Heterocephalus_glaber.JH602082.1                       C 0 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_90013                10408 45 -     15841 G-GG-C-CTC--T--T--CG-TCTTG--------GCCACAAA-------G-TGGA---C--------C--T--CA--------CTTCA--C---TAA--C----A
i Heterohyrax_brucei.HetBruBak_scaffold_90013            C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_38803                6649 45 +     36432 A-GG-C-TTT--T--T--TA-CTTTG--------GTCACAAA-------A-CTT----A--------C--A--CC--------CTTCC--C---TAA--AA---T
i Hippopotamus_amphibius.HipAmp_scaffold_38803           C 0 C 0
s Hipposideros_armiger.JXIK01000431.1                       132268 46 +   1711038 A-GG-T-TTT--T--T--CA-CTTTG--------GCCACAGA-------A-TTT----G--------CCAA--AT--------TTTCC--C---TAA--A----A
i Hipposideros_armiger.JXIK01000431.1                    C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_65612                9181 46 -     20285 A-GG-C-TTT--T--T--CA-CTTTG--------GCCACAGA-------A-TTT----G--------CCAA--AT--------TTTCC--C---TAA--A----A
i Hipposideros_galeritus.HipGal_scaffold_65612           C 0 C 0
s Hoolock_leuconedys.ctg274                                    460641 45 +    630532 AGGG-T-GTT--T--T--GA-CCTCT--------GCCACAAA-------ACTT-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Hoolock_leuconedys.ctg274                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_62789                   9145 45 -     22022 G-CG-C-TTT--T--T--CA-CTTTG--------GCCACAAA-------A-CTT----A--------C--A--TA--------CTTCC--C---TAA--AA---T
i Hyaena_hyaena.HyaHya_flattened_line_62789              C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117            43382 42 -    143317 A-GA-T-TGT--C--T--TA-CTCTT--------ACCACCCA-------A-TTT----A--------C--A--GA--------CTTTG--C---TTT--------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_11117        C 0 I 4
s Hylobates_agilis.k141_967383                                1910 45 -      4846 AGGG-T-GTT--T--T--GA-CCTCT--------GCCACAAA-------ACTT-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Hylobates_agilis.k141_967383                           C 0 C 0
s Hylobates_klossii.k141_483676                                368 45 -      8919 AGGG-T-GTT--T--T--GA-CCTCT--------GCCACAAA-------ACTT-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Hylobates_klossii.k141_483676                          C 0 C 0
s Hylobates_pileatus_b.LG02                                     189555339 45 - 191637585 AGGG-T-GTT--T--T--GA-CCTCT--------GCCACAAA-------ACTT-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Hylobates_pileatus_b.LG02                                     C 0 C 0
s Hylobates_pileatus_a.tarseq_633                            3348226 45 -  11177569 AGGG-T-GTT--T--T--GA-CCTCT--------GCCACAAA-------ACTT-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Hylobates_pileatus_a.tarseq_633                          C 0 C 0
s Hystrix_cristata.HysCri_scaffold_5660                     101382 45 +    135385 A-AG-T-TTT--C--T--TA-TTCTT--------ATCACCAA-------A-TTT----A--------C--A--GA--------CTTTA--C---TAA--AA---A
i Hystrix_cristata.HysCri_scaffold_5660                  C 0 C 0
s Ictidomys_tridecemlineatus.JH393364.1                    7543941 44 -   7955117 G-GG-C-TTT--T--T--TA-CATTT--------GCCACA-A-------A-ACT---CC--------T--G--CA--------CTTCA--C---TAA--A----A
i Ictidomys_tridecemlineatus.JH393364.1                  C 0 C 0
s Indri_indri.k141_1997670                                    2378 39 +      8453 -------CTT--T--T--TAACTTTG--------GCCACAAA-------A--C-----A--------C--A--CG--------CTTCT--C---TAA--A----A
i Indri_indri.k141_1997670                               I 3 C 0
s Inia_geoffrensis.IniGeo_flattened_line_34779               29367 45 -     31341 G-GG-T-TTT--T--T--TA-CTTTG--------GTCACAAA-------A-CTT----A--------C--A--CT--------CTTCC--C---TAA--AA---T
i Inia_geoffrensis.IniGeo_flattened_line_34779           C 0 C 0
s Jaculus_jaculus.JH725527.1                               8298827 46 -   9596543 A-AG-C-TGT--A--GCACA-CTTCA--------GCCATAAA-------A-TT----GA--------T--G--CA--------TTTca--c---taa--a----a
i Jaculus_jaculus.JH725527.1                             C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_3970                  5118 46 +     97402 A-GG-C-TTT--T--T--TA-CTTTG--------GTCCCCAA-------A-CTTA---A--------C--A--CT--------CTTAC--C---TAA--AA---T
i Kogia_breviceps.KogBre_flattened_line_3970             C 0 C 0
s Lagothrix_lagothricha.k141_1005387                         33312 52 -     38430 A-GG-T-TTT--C--C--TG-CTTTT--------GCTACAAA-------GCTT-----ACACACGTAC--A--CA--------CTTCA--A---GAA--A----A
i Lagothrix_lagothricha.k141_1005387                     C 0 C 0
s Lemur_catta.scaffold_24                                 15544540 39 -  30322482 -------CTT--T--T--TAACTTTG--------GCCGCAAA-------A--C-----A--------C--A--CA--------CTGCA--C---TAA--A----A
i Lemur_catta.scaffold_24                                I 3 C 0
s Lepilemur_ankaranensis.k141_2922                            8924 46 -     24677 -------TTT--T--T--TAACTTTG--------GCCACAAAACACAAAA--C-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Lepilemur_ankaranensis.k141_2922                       I 3 C 0
s Lepilemur_dorsalis.k141_387009                              4893 46 -     31569 -------TTT--T--T--TAACTTTG--------GCCACAAAACACAAAA--C-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Lepilemur_dorsalis.k141_387009                         I 3 C 0
s Lepilemur_ruficaudatus.k141_121139                         22955 46 +     25010 -------TTT--T--T--TAACTTTG--------GCCACAAAACACAAAA--C-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Lepilemur_ruficaudatus.k141_121139                     I 3 C 0
s Lepilemur_septentrionalis.k141_185316                      48509 46 +     54090 -------TTT--T--T--TAACTTTG--------GCCACAAAACACAAAA--G-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Lepilemur_septentrionalis.k141_185316                  I 3 C 0
s Leptonychotes_weddellii.KB714746.1                       3074620 45 +   3914936 G-GG-C-TTT--G--T--CA-CTTTG--------TCCACAAA-------A-CTT----A--------T--A--TG--------CATCC--C---TAA--AA---T
i Leptonychotes_weddellii.KB714746.1                     C 0 C 0
s Lepus_americanus.LepAme_scaffold_57262                     13051 50 -     23961 C-AG-C-TTT--T--T--TA-CTTTGACT---GCAACACG-G-------A-CAT---GA--------C--A--CA--------CTTGA--C---AAA--CA---T
i Lepus_americanus.LepAme_scaffold_57262                 C 0 C 0
s Lipotes_vexillifer.KE559953.1                             299284 44 -    662738 A-GG-T-TT---T--T--TA-CTTTG--------GTCACAAA-------A-CTT----A--------C--A--CT--------CTTCC--C---TAG--AA---T
i Lipotes_vexillifer.KE559953.1                          C 0 C 0
s Lophocebus_aterrimus.ctg367                              1464861 28 +   1826925 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Lophocebus_aterrimus.ctg367                            C 0 I 15
s Loris_lydekkerianus.k141_2958567                            3952 44 -     22734 T-GGGC-TTT--T--T--TA-CTTTG--------GCCACAAA-------A-AC-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Loris_lydekkerianus.k141_2958567                       C 0 C 0
s Loris_tardigradus.ctg83                                  1061380 44 +   6120653 T-GGGC-TTT--T--T--TA-CTTTG--------GCCACAAA-------A-AC-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Loris_tardigradus.ctg83                                C 0 C 0
s Lycaon_pictus.CM007581.1                                17988269 45 -  59628241 G-GG-C-TTT--G--T--CC-CTTTG--------TCCACAAA-------A-CTT----T--------T--A--TA--------CTTCC--C---TAA--AA---T
i Lycaon_pictus.CM007581.1                               C 0 C 0
s Macaca_arctoides.k141_2326796                              33121 28 +     40492 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTG----------------------------------------------------
i Macaca_arctoides.k141_2326796                          C 0 I 15
s Macaca_assamensis.Contig5                               59703046 28 +  60120075 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTG----------------------------------------------------
i Macaca_assamensis.Contig5                              C 0 I 15
s Macaca_cyclopis.k119_794849                                 7240 28 +      8714 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Macaca_cyclopis.k119_794849                            C 0 I 15
s Macaca_fascicularis.k141_814140                           107674 28 -    114318 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Macaca_fascicularis.k141_814140                        C 0 I 15
s Macaca_fuscata.k119_943731                                  7485 28 +     13165 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Macaca_fuscata.k119_943731                             C 0 I 15
s Macaca_leonina.k141_2438370                                12858 28 -     14632 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Macaca_leonina.k141_2438370                            C 0 I 15
s Macaca_maura.k141_515834                                   13016 28 +     14712 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Macaca_maura.k141_515834                               C 0 I 15
s Macaca_mulatta.NC_041758.1                             186867055 28 + 187317192 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Macaca_mulatta.NC_041758.1                             C 0 I 15
s Macaca_nemestrina.KQ007038.1                            25492170 28 -  25927173 A-CT-T-GTT--T--T--CA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Macaca_nemestrina.KQ007038.1                           C 0 I 15
s Macaca_nigra.k141_128247                                   20486 28 +     98240 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Macaca_nigra.k141_128247                               C 0 I 15
s Macaca_radiata.k141_3254723                                 6028 28 +     10028 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Macaca_radiata.k141_3254723                            C 0 I 15
s Macaca_siberu.k141_1929020                                  7280 28 -      9047 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Macaca_siberu.k141_1929020                             C 0 I 15
s Macaca_silenus.Contig273                                  358289 28 -    668171 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Macaca_silenus.Contig273                               C 0 I 15
s Macaca_thibetana.k99_596453                                 1661 28 -      5469 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Macaca_thibetana.k99_596453                            C 0 I 15
s Macaca_tonkeana.k141_683787                                 7499 28 +      9199 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Macaca_tonkeana.k141_683787                            C 0 I 15
s Macroglossus_sobrinus.MacSob_scaffold_4024                 24175 46 +    270270 A-GA-C-TTTTTT--T--TA-CTTTG--------GCCACAAA-------A-CTT----A--------C--A--CC--------CTTCC--T---TAA--A----A
i Macroglossus_sobrinus.MacSob_scaffold_4024             C 0 C 0
s Mandrillus_leucophaeus.scaffold280                      23961937 28 -  24302211 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Mandrillus_leucophaeus.scaffold280                     C 0 I 15
s Mandrillus_sphinx.Contig270                               377690 28 +    752769 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Mandrillus_sphinx.Contig270                            C 0 I 15
s Manis_javanica.JSZB01003497.1                              40361 47 +    737560 G-GG-C-ATT--T--G--TA-CTTTG--------GCCACTTA-------A-CTT----A--------C--A--CA--------TGTCCCCC---TAA--AA---T
i Manis_javanica.JSZB01003497.1                          C 0 C 0
s Manis_pentadactyla.KN006162.1                              72531 47 -    317179 G-GG-C-ATT--T--T--TA-CTTTA--------GCCACTTA-------A-CTT----A--------C--A--CA--------TGTCCCCC---TAA--AA---T
i Manis_pentadactyla.KN006162.1                          C 0 C 0
s Marmota_marmota.CZRN01000018.1                          33125005 44 -  40650429 G-GG-C-TTT--T--T--TA-CATTT--------GCCACA-A-------A-ACT---CC--------T--G--CA--------CTTCA--C---TAA--A----A
i Marmota_marmota.CZRN01000018.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_4542                        36067 43 -    207569 G-GC-C-TT---T--T--AA-CTTTG--------GCCACGTA-------A-CT----CG--------C--A--GC--------ACGCC--C---TGA--A----A
i Megaderma_lyra.MegLyr_scaffold_4542                    C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_19308             23437 45 +     74585 G-GG-T-TTT--G--T--CA-CTTCG--------TCCACAAA-------A-CTT----A--------T--A--TA--------CATCC--C---TAC--AA---T
i Mellivora_capensis.MelCap_flattened_line_19308         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_7390                 66213 10 +    140813 A-GG-C-Ttt--t--t--a--------------------------------------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_7390             C 0 I 858
s Mesocricetus_auratus.KB708134.1                         12212524 40 -  29670104 A-GT-T-TTT--C--T--TG-TGTTA--------GTCACA------------T----CA--------T--A--TC--------CATCA--C---TAA--A----A
i Mesocricetus_auratus.KB708134.1                        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_74495                     5093 45 -     19186 A-GG-A-TTT--T--T--TA-CTTTG--------GTCACAAA-------A-CTT----A--------C--A--CT--------CTTCC--C---TAA--AA---T
i Mesoplodon_bidens.MesBid_scaffold_74495                C 0 C 0
s Microcebus_murinus.CM007674.1                           18313510 39 -  93316391 -------CTT--T--T--TAACTCTG--------GCCACAAG-------A--C-----A--------C--A--CA--------CTTCA--C---TAG--A----C
i Microcebus_murinus.CM007674.1                          I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_39861                18950 43 -     30105 G-GG-C-TTC--T--T--A--CTTTG--------GCCACAAA-------A-TTT----A--------C--A--CC--------CTTCC--C---TAA--A----A
i Micronycteris_hirsuta.MicHir_scaffold_39861            C 0 C 0
s Microtus_ochrogaster.CM001695.1                         11284562 24 -  27267610 ----------------------------------GCCACA------------TT----A--------T--A--CA--------CATCA--C---TAA--A----A
i Microtus_ochrogaster.CM001695.1                        n 2106 C 0
s Miopithecus_ogouensis.k141_791330                           1811 44 -     13566 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT-----A--------G--A--CA--------CTTCA--C---TAA--A----A
i Miopithecus_ogouensis.k141_791330                      C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_55178        25059 45 +     26817 G-GG-C-TTT--G--T--CA-CTTTG--------TCCACAAA-------A-CTT----A--------T--A--TG--------CATCC--C---TAA--AA---T
i Mirounga_angustirostris.MirAng_flattened_line_55178    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_103                    57021 45 -    437263 A-GG-T-TTT--T--T--TA-CTTTG--------GTCACGAA-------A-CTT----A--------C--A--CT--------CTTCC--C---TAA--AA---T
i Monodon_monoceros.MonMon_M_scaffold_103                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_1417                 162158 43 -    366855 A-GG-C-TTT--T--C--A--CTTGG--------GCCACAAA-------A-CTT----A--------C--A--CC--------CTTCC--C---TAA--A----A
i Mormoops_blainvillei.MorMeg_scaffold_1417              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_13123                  32198 45 +     82753 A-GG-C-TTT--T--T--TA-ATTTG--------ATCACAAA-------A-TTT----A--------C--A--CC--------CTTCC--C---TAA--A---GA
i Moschus_moschiferus.MosMos_scaffold_13123              C 0 C 0
s Mungos_mungo.MunMun_flattened_line_18455                   21854 45 +     63510 G-GG-C-TTT--T--T--CA-CTTTG--------GCCACAAA-------A-CCT----A--------C--A--TA--------ATTCC--C---TAA--AA---T
i Mungos_mungo.MunMun_flattened_line_18455               C 0 C 0
s Mus_pahari.LT608297.1                                   31390994 40 -  89631738 A-GG-C-TAT--T--C--TA-CATCA--------GCTGCA------------TT----A--------T--A--TA--------TGTCA--C---TAA--A----A
i Mus_pahari.LT608297.1                                  C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_74954             15680 42 -     17106 T-GG-C-TTT--C--A--TA-CT-TT--------GACCCA-A-------A-CTT----G--------C--A--CA--------CTTCA--T---TAA--A----C
i Muscardinus_avellanarius.MusAve_scaffold_74954         C 0 C 0
s Mustela_putorius.JH418006.1                               330651 45 -  14710649 G-GG-T-TTT--G--C--CA-CTTTG--------TCCACAAA-------A-CAT----A--------T--A--TA--------CATCC--C---TAC--AA---T
i Mustela_putorius.JH418006.1                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_57531                      5669 37 +     27262 A--A-C-TTT--C--T--TA-CTCTT--------ATCATCCA-------A-TATATATA--------T--A--GA--------C---------------------
i Myocastor_coypus.MyoCoy_scaffold_57531                 C 0 I 6
s Myrmecophaga_tridactyla.MyrTri_scaffold_66448              14401 27 -     28317 A-AG-T-GTT--T--T--TA-CATGG--------CCCACAAA-------A-TT----------------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_66448          C 0 I 18
s Nasalis_larvatus.k141_970469                               18679 44 +     37058 A-GG-T-GTT--T--T--TA-CTTTG--------TCCACAAA-------ACTT-----C--------G--A--TA--------CTTCA--C---TAA--A----A
i Nasalis_larvatus.k141_970469                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007730.1                20343612 45 +  31847680 G-GG-C-TTT--G--T--CA-CTTTG--------TCCACAAA-------A-CTT----A--------T--A--TG--------CATCC--C---TAA--AA---T
i Neomonachus_schauinslandi.NINY01007730.1               C 0 C 0
s Neophocaena_asiaeorientalis.KZ687982.1                   5895073 45 +   7148211 A-GG-T-TTT--T--T--TA-CTTTG--------GTCACAAA-------A-CTT----A--------C--A--CT--------CTTCC--C---TAA--AA---T
i Neophocaena_asiaeorientalis.KZ687982.1                 C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000658.1               9182159 45 -   9404916 G-GG-C-TTT--G--T--CC-CTTTG--------TCCACAAA-------A-CTT----T--------T--A--TA--------CTTCC--C---TAA--AA---T
i Nyctereutes_procyonoides.CAJHUB010000658.1             C 0 C 0
s Nycticebus_bengalensis.LG01                            102653494 44 - 196305487 T-GGGT-TTT--T--T--TA-CTTTG--------GCCACAAA-------A-AC-----A--------C--A--CA--------CTTCA--A---TAA--A----A
i Nycticebus_bengalensis.LG01                            C 0 C 0
s Nycticebus_coucang.k141_921975                              9636 44 +     15238 T-GGGT-TTT--T--T--TA-CTTTG--------GCCACAAA-------A-AC-----A--------C--A--CA--------CTTCA--A---TAA--A----A
i Nycticebus_coucang.k141_921975                         C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       105827983 44 + 199412804 T-GGGT-TTT--T--T--TA-CTTTG--------GCCACAAA-------A-AC-----A--------C--A--CA--------CTTCA--A---TAA--A----A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_1       C 0 C 0
s Octodon_degus.JH651603.1                                  800390 41 +  11899542 A--G-C-TTC--C--T--TA-CTCTT--------ACCACCCA-------G-TT-----A--------C--A--GA--------CTTTA--c---t----t---aa
i Octodon_degus.JH651603.1                               C 0 I 2
s Odobenus_rosmarus.KB229312.1                              534160 45 -   2017862 G-GG-C-TTT--G--T--CA-CTTTG--------TCCACAAA-------A-CTT----A--------T--A--TG--------CACCC--C---TAA--AA---T
i Odobenus_rosmarus.KB229312.1                           C 0 C 0
s Odocoileus_virginianus.KZ100018.1                         168868 44 +    630418 A-GG-C-TTT--T--T---A-ATTTG--------ATCACAAA-------A-CTT----A--------C--A--CC--------CTTCC--C---TAA--A---GA
i Odocoileus_virginianus.KZ100018.1                      C 0 C 0
s Okapia_johnstoni.LVCL01S0005463.1                         107749 45 -    150152 A-GG-C-TTT--T--T--TA-ATTTG--------ATCACAAA-------A-CGT----A--------C--A--CT--------CTTCC--C---TAA--A---GA
i Okapia_johnstoni.LVCL01S0005463.1                      C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_7387                    25363 40 +    140218 A-GT-C-TTT--C--C--TA-CATTT--------TCCACA------------TT----A--------T--A--CA--------CATCA--C---TAA--A----A
i Ondatra_zibethicus.OndZib_scaffold_7387                C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_28377                   12534 19 +     41509 A-GT-C-TTT--C--C--TA-CATTA--------GTG--------------------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_28377               C 0 I 12
s Orcinus_orca.KB316932.1                                  2812299 45 -  10937097 A-GG-T-TTT--T--T--TA-CTCTG--------GTCACAAA-------A-CTT----A--------C--A--CT--------CTTCC--C---TAA--AA---T
i Orcinus_orca.KB316932.1                                C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_327065               1929 45 -      4812 G-GG-C-CTT--T--A--CA-CTTTG--------GCCACAAA-------A-CGTA---A--------C--A--CA--------CTTCA--C---CAG--A----A
i Orycteropus_afer.OryAfe_flattened_line_327065          C 0 C 0
s Oryctolagus_cuniculus.CM000791.1                        67190655 53 + 174332312 C-AG-C-TCT--T--T--TA-CTTAGACTACAGCGACACT-G-------A-CAT---GA--------C--A--CA--------CTTGA--C---AAA--CA---T
i Oryctolagus_cuniculus.CM000791.1                       C 0 C 0
s Otocyon_megalotis.JAEUCK010005147.1                       495234 45 -    559221 G-GG-C-TTT--G--T--CC-CTTTG--------TCCACAAA-------A-CTT----T--------T--A--TA--------CTTCC--C---TAA--AA---T
i Otocyon_megalotis.JAEUCK010005147.1                    C 0 C 0
s Otolemur_crassicaudatus.k141_187572                         4599 44 -      5557 T-GGGC-TTT--T--T--TA-CTTTG--------GCCACAAA-------A-AC-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Otolemur_crassicaudatus.k141_187572                    C 0 C 0
s Otolemur_garnettii.GL873799.1                             738252 44 -   1103335 T-GGGC-TTT--T--T--TA-CCTTG--------GCCACAAA-------A-AC-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Otolemur_garnettii.GL873799.1                          C 0 C 0
s Ovis_aries.CM001607.2                                   17617679 45 +  44047080 T-GG-C-TTT--T--T--TA-ATTTG--------ATCAGAAA-------A-CTT----A--------C--A--CC--------CTTCC--C---TAA--A---GA
i Ovis_aries.CM001607.2                                  C 0 C 0
s Ovis_canadensis.OviCan_scaffold_75879                       1680 45 -     13921 T-GG-C-TTT--T--T--TA-ATTTG--------ATCACAAA-------A-CTT----A--------C--A--CC--------CTTCC--C---TAA--A---GA
i Ovis_canadensis.OviCan_scaffold_75879                  C 0 C 0
s Pan_paniscus.KQ411608.1                                     3531 45 +     15831 GGGG-T-GTT--T--T--TA-CTTCT--------GCCCCCAA-------ACTT-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Pan_paniscus.KQ411608.1                                C 0 C 0
s Pan_troglodytes.CM009242.2                             187649345 45 + 189151597 GGGG-T-GTT--T--T--TA-CTTCC--------GCCCCCAA-------ACTT-----A--------C--A--CA--------CTTCA--C---TAA--A----A
i Pan_troglodytes.CM009242.2                             C 0 C 0
s Pantholops_hodgsonii.KE114653.1                          1296597 45 -   2937107 A-GG-C-TTT--T--T--TA-ATTTG--------ATCACAAA-------A-CTT----A--------C--A--CC--------CTTCC--C---TAA--A---GA
i Pantholops_hodgsonii.KE114653.1                        C 0 C 0
s Papio_anubis.CM001495.2                                183470110 28 + 183742232 A-CT-T-GTC--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Papio_anubis.CM001495.2                                C 0 I 15
s Papio_cynocephalus.k141_703094                              6448 28 -     17637 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Papio_cynocephalus.k141_703094                         C 0 I 15
s Papio_hamadryas.Contig39                                20592607 28 +  20919399 A-CT-T-GTC--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Papio_hamadryas.Contig39                               C 0 I 15
s Papio_kindae.k141_1936966                                  31872 28 +     41871 A-CT-T-GTT--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Papio_kindae.k141_1936966                              C 0 I 15
s Papio_papio.k141_2087334                                    7455 28 -     13745 A-CT-T-GTC--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Papio_papio.k141_2087334                               C 0 I 15
s Papio_ursinus.k141_4818248                                 14955 28 +     25215 A-CT-T-GTC--T--T--TA-CTTTG--------GCCACAAA-------ACTT----------------------------------------------------
i Papio_ursinus.k141_4818248                             C 0 I 15
s Paradoxurus_hermaphroditus.ParHer_flattened_line_15272     42608 45 -     78924 G-GG-C-TTT--T--T--CA-CTTTG--------GCCACAAA-------A-CTT----A--------G--G--AA--------CTTCC--C---TAA--AA---C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_15272 C 0 C 0
s Perodicticus_ibeanus.k141_1387561                          11882 44 +     15382 T-GGAC-TTT--T--T--TA-CTTTG--------GCCACAAA-------A-AC-----A--------C--A--CA--------CTTCG--C---TAC--A----A
i Perodicticus_ibeanus.k141_1387561                      C 0 C 0
s Perodicticus_potto.k141_842195                             18432 44 -     21729 T-GGAC-TTT--T--T--TA-CTTTG--------GCCACAAA-------A-AC-----A--------C--A--CA--------CTTCG--C---TAC--A----A
i Perodicticus_potto.k141_842195                         C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_39705       13677 30 +     28765 A-GA-T-TTT--C--C--CA-CTATT--------ACCGTAAC-------A-TTT----A--------C-------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_39705   C 0 I 13
s Peromyscus_maniculatus.KI615324.1                       18245290 40 -  18517816 A-GT-C-TTT--C--C--TA-CATTA--------GCCATA------------TT----A--------G--C--CA--------CATTA--C---TAA--G----A
i Peromyscus_maniculatus.KI615324.1                      C 0 C 0
s Petromus_typicus.PetTyp_scaffold_641188                      151 44 -       386 A-AG-T-TTC--C--T--TA-CTCTT--------CCCACCCA-------A-TTT----A--------T--A--GG--------A------A---AAA--AAAAAA
i Petromus_typicus.PetTyp_scaffold_641188                N 0 N 0
s Phocoena_phocoena.PhoPho_flattened_line_24159              39002 45 +     63832 A-GG-T-TTT--T--T--TA-CTTTG--------GTCACAAA-------A-CTT----A--------C--A--CT--------CTTCC--C---TAA--AA---T
i Phocoena_phocoena.PhoPho_flattened_line_24159          C 0 C 0
s Piliocolobus_badius.k141_2704958                           28911 44 -     55023 C-CT-T-GTT--T--T--TA-CTTTA--------GCCACAAA-------ACTT-----C--------G--A--CA--------CTTCA--C---TAA--A----A
i Piliocolobus_badius.k141_2704958                       C 0 C 0
s Piliocolobus_gordonorum.k141_381342                        64329 44 +     89929 C-CT-T-GTT--T--T--TA-CTTTA--------GCCACAAA-------ACTT-----C--------G--A--CA--------CTTCA--C---TAA--A----A
i Piliocolobus_gordonorum.k141_381342                    C 0 C 0
s Piliocolobus_kirkii.k141_1310104                           14420 44 -     40849 C-CT-T-GTT--T--T--TA-CTTTA--------GCCACAAA-------ACTT-----C--------G--A--CA--------CTTCA--C---TAA--A----A
i Piliocolobus_kirkii.k141_1310104                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000141.1                14326897 44 -  14605196 C-CT-T-GTT--T--T--TA-CTTTA--------GCCACAAA-------ACTT-----C--------G--A--CA--------CTTCA--C---TAA--A----A
i Piliocolobus_tephrosceles.PDMG02000141.1               C 0 C 0
s Pithecia_albicans.k141_1476471                             19719 44 +     26961 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----A--------C--A--CA--------CTACA--G---TAA--A----A
i Pithecia_albicans.k141_1476471                         C 0 C 0
s Pithecia_chrysocephala.k141_839575                         15732 44 +     23417 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----A--------C--A--CA--------CTACA--G---TAA--A----A
i Pithecia_chrysocephala.k141_839575                     C 0 C 0
s Pithecia_hirsuta.k141_305604                               19713 44 +     29694 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----A--------C--A--CA--------CTACA--G---TAA--A----A
i Pithecia_hirsuta.k141_305604                           C 0 C 0
s Pithecia_mittermeieri.k141_446740                          44748 44 +     52772 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----A--------C--A--CA--------CTACA--G---TAA--A----A
i Pithecia_mittermeieri.k141_446740                      C 0 C 0
s Pithecia_pissinattii.k141_1824269                          19739 44 +     26198 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----A--------C--A--CA--------CTACA--G---TAA--A----A
i Pithecia_pissinattii.k141_1824269                      C 0 C 0
s Pithecia_pithecia.tarseq_165                             3956074 44 +   4542175 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----A--------C--A--CA--------CTACA--G---TAA--A----A
i Pithecia_pithecia.tarseq_165                           C 0 C 0
s Pithecia_vanzolinii.k141_1697688                           19666 44 -     23490 A-GG-T-TTT--T--C--TG-CTTTT--------GCTACAAA-------GCTT-----A--------C--A-